316 200 0 0 chr17 1 56 -85438424 - Alu SINE Alu -247 55 1 2325 82 10 0 chr17 66 371 -85438109 - AluSx SINE Alu -4 308 1 2014 121 3 16 chr17 684 851 -85437629 - AluJb SINE Alu -11 301 138 2138 105 3 7 chr17 851 1156 -85437324 - AluY SINE Alu -7 304 1 2014 121 3 16 chr17 1156 1293 -85437187 - AluJb SINE Alu -174 138 1 1874 101 0 8 chr17 1441 1698 -85436782 - AluSx SINE Alu -57 255 1 223 278 0 0 chr17 1990 2044 -85436436 - L2 LINE L2 -2 3270 3217 2232 106 3 0 chr17 2215 2516 -85435964 + AluSx SINE Alu 1 302 -10 210 333 42 0 chr17 3102 3198 -85435282 + MIR3 SINE MIR 109 208 0 485 294 63 50 chr17 3461 3517 -85434963 - MIR SINE MIR 0 262 208 2202 91 0 10 chr17 3517 3825 -85434655 - AluY SINE Alu -6 305 1 485 294 63 50 chr17 3825 3989 -85434491 - MIR SINE MIR -54 208 39 1523 97 0 18 chr17 4525 4752 -85433728 - AluSg SINE Alu -87 223 1 1310 130 0 5 chr17 5897 6097 -85432383 + AluSq SINE Alu 30 228 -85 2390 54 0 0 chr17 6797 7095 -85431385 - AluY SINE Alu -13 298 1 2368 67 13 13 chr17 7342 7518 -85430962 - AluSx SINE Alu 0 312 134 2051 120 3 7 chr17 7518 7826 -85430654 - AluSp SINE Alu -6 307 1 2368 67 13 13 chr17 7826 7961 -85430519 - AluSx SINE Alu -177 135 1 1099 178 30 26 chr17 8073 8127 -85430353 + AluJo SINE Alu 78 130 -182 2381 67 3 3 chr17 8127 8427 -85430053 + AluSp SINE Alu 1 300 -13 1099 178 30 26 chr17 8427 8603 -85429877 + AluJo SINE Alu 130 309 -3 1680 90 0 25 chr17 9739 9983 -85428497 - AluSg/x SINE Alu -5 307 70 1633 129 4 0 chr17 10083 10323 -85428157 + AluSx SINE Alu 54 294 -18 208 293 0 0 chr17 10460 10518 -85427962 - L2 LINE L2 -638 2676 2619 837 141 7 28 chr17 10526 10668 -85427812 + AluJo SINE Alu 1 139 -173 1607 148 0 76 chr17 10670 10811 -85427669 + AluJo SINE Alu 5 110 -202 2460 42 0 0 chr17 10811 11100 -85427380 + AluY SINE Alu 5 293 -18 1607 148 0 76 chr17 11100 11275 -85427205 + AluJo SINE Alu 110 297 -15 293 174 153 41 chr17 11401 11418 -85427062 + MER5A DNA MER1_type 1 15 -174 1963 118 20 14 chr17 11418 11715 -85426765 + AluSx SINE Alu 3 301 -11 293 174 153 41 chr17 11715 11795 -85426685 + MER5A DNA MER1_type 15 109 -80 980 98 0 0 chr17 12385 12517 -85425963 - AluSq/x SINE Alu -181 132 1 228 160 9 66 chr17 13843 13949 -85424531 + GA-rich Low_complexity Low_complexity 2 101 0 264 287 46 11 chr17 14105 14192 -85424288 + L1MC/D LINE L1 5576 5665 -2143 479 204 0 11 chr17 14195 14288 -85424192 - MER8 DNA MER2_type 0 239 148 2172 100 0 7 chr17 14289 14588 -85423892 + AluSx SINE Alu 1 297 -15 997 67 0 30 chr17 14761 14896 -85423584 + AluY SINE Alu 1 131 -180 2117 84 40 7 chr17 14898 15195 -85423285 + AluY SINE Alu 1 307 -4 285 248 28 9 chr17 15200 15309 -85423171 + L1M4 LINE L1 4499 4609 -1537 2038 112 7 0 chr17 16100 16396 -85422084 - AluSx SINE Alu -14 298 1 1057 81 7 0 chr17 16738 16874 -85421606 - AluSq/x SINE Alu -176 137 1 2384 67 0 16 chr17 16986 17302 -85421178 - AluY SINE Alu 0 311 1 275 158 0 4 chr17 17302 17361 -85421119 - Alu SINE Alu -255 44 1 21 0 0 0 chr17 17630 17651 -85420829 + AT_rich Low_complexity Low_complexity 1 21 0 1230 64 0 0 chr17 18518 18675 -85419805 + AluSq SINE Alu 1 157 -156 632 256 12 12 chr17 19023 19183 -85419297 - MER5A DNA MER1_type -29 160 1 2127 111 0 0 chr17 19307 19604 -85418876 - AluSx SINE Alu -15 297 1 2487 53 3 0 chr17 19609 19911 -85418569 - AluY SINE Alu -8 303 1 23 0 0 0 chr17 19911 19934 -85418546 + AT_rich Low_complexity Low_complexity 1 23 0 804 147 0 0 chr17 19989 20118 -85418362 - AluSc SINE Alu -5 304 176 867 68 17 0 chr17 20219 20337 -85418143 + AluY SINE Alu 181 300 -11 243 88 0 0 chr17 20717 20751 -85417729 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 712 75 0 0 chr17 20827 20921 -85417559 - AluY SINE Alu -14 297 204 1792 89 0 0 chr17 20921 21156 -85417324 - AluSc SINE Alu -74 235 1 388 244 16 11 chr17 21443 21569 -85416911 + MIR SINE MIR 104 229 -33 375 192 83 154 chr17 22071 22140 -85416340 - MER2 DNA MER2_type 0 345 273 2129 112 0 0 chr17 22140 22444 -85416036 + AluSx SINE Alu 1 304 -8 1890 118 13 41 chr17 22445 22759 -85415721 + AluSx SINE Alu 1 305 -7 375 192 83 154 chr17 22759 22927 -85415553 - MER2 DNA MER2_type -71 274 123 438 148 28 46 chr17 22928 23036 -85415444 + L1MA4 LINE L1 6195 6300 0 445 235 52 52 chr17 23073 23209 -85415271 - MER2 DNA MER2_type -209 136 1 201 231 62 0 chr17 23258 23323 -85415157 - MER5B DNA MER1_type -106 72 4 1906 144 3 7 chr17 23870 24169 -85414311 - AluSx SINE Alu -14 298 1 311 256 31 62 chr17 24171 24300 -85414180 - HAL1 LINE L1 -583 1924 1800 780 263 85 18 chr17 25007 25288 -85413192 - MER102b DNA MER1_type 0 341 42 493 343 52 45 chr17 25413 25460 -85413020 - L3 LINE CR1 -860 717 672 2196 111 0 0 chr17 25460 25767 -85412713 - AluSx SINE Alu -5 307 1 493 343 52 45 chr17 25767 26005 -85412475 - L3 LINE CR1 -905 672 430 1485 165 104 4 chr17 26715 26994 -85411486 - AluJo SINE Alu -5 307 1 212 261 0 0 chr17 26998 27044 -85411436 + T-rich Low_complexity Low_complexity 5 50 0 1911 128 0 42 chr17 27456 27768 -85410712 + AluSx SINE Alu 1 299 -13 182 36 0 36 chr17 27960 27988 -85410492 + (CGGGGG)n Simple_repeat Simple_repeat 2 28 0 2123 54 0 0 chr17 29443 29701 -85408779 + AluSx SINE Alu 39 296 -16 1389 137 82 4 chr17 29957 30190 -85408290 + AluJo SINE Alu 14 264 -48 2116 111 0 10 chr17 30368 30666 -85407814 + AluSx SINE Alu 1 295 -17 2000 151 0 0 chr17 32040 32351 -85406129 - AluSx SINE Alu -1 311 1 447 71 0 0 chr17 32351 32407 -85406073 - AluSq/x SINE Alu -177 135 80 1420 142 0 0 chr17 32409 32621 -85405859 - AluSq SINE Alu -101 212 1 268 348 68 59 chr17 32747 32983 -85405497 - L2 LINE L2 -8 3264 3027 1954 112 18 3 chr17 33099 33385 -85405095 - AluSg SINE Alu -20 290 1 1712 165 34 3 chr17 33443 33734 -85404746 - AluJb SINE Alu -10 302 3 559 149 0 26 chr17 34809 34977 -85403503 + AluSq SINE Alu 1 206 -107 2099 110 3 0 chr17 35184 35476 -85403004 - AluSx SINE Alu -19 293 1 2030 119 10 0 chr17 35479 35772 -85402708 - AluSq SINE Alu -17 296 1 267 31 0 0 chr17 36314 36346 -85402134 + (TG)n Simple_repeat Simple_repeat 2 33 0 1500 182 7 20 chr17 36346 36503 -85401977 - AluJo SINE Alu -20 292 139 1975 89 32 0 chr17 36503 36784 -85401696 - AluSg SINE Alu -8 302 13 1500 182 7 20 chr17 36784 36922 -85401558 - AluJo SINE Alu -173 139 1 1408 93 15 0 chr17 37641 37845 -85400635 - AluSg/x SINE Alu -16 294 88 2358 77 0 3 chr17 37948 38248 -85400232 - AluSp SINE Alu -14 299 1 545 242 47 32 chr17 38250 38440 -85400040 - Charlie2 DNA MER1_type -556 2306 2114 455 137 41 0 chr17 38454 38527 -85399953 + FLAM_A SINE Alu 56 131 -11 952 275 30 0 chr17 38528 38790 -85399690 - Charlie2 DNA MER1_type -737 2125 1856 2308 80 3 0 chr17 38804 39106 -85399374 - AluSx SINE Alu -9 303 1 536 268 22 0 chr17 39228 39366 -85399114 - Charlie2 DNA MER1_type -2713 149 9 2293 95 7 0 chr17 39953 40257 -85398223 - AluSq SINE Alu -7 306 1 1033 89 0 0 chr17 40257 40392 -85398088 - AluSq/x SINE Alu -178 135 1 572 233 25 17 chr17 40396 40516 -85397964 - FLAM_A SINE Alu -15 127 7 2380 42 0 0 chr17 40523 40831 -85397649 - AluY SINE Alu 0 308 1 316 200 0 0 chr17 40842 40902 -85397578 - L1MA6 LINE L1 -5 6295 6236 240 307 162 0 chr17 41091 41234 -85397246 + MIR3 SINE MIR 10 179 -75 383 308 94 23 chr17 41247 41479 -85397001 - MIR SINE MIR -6 256 14 2326 70 3 0 chr17 42571 42872 -85395608 - AluSx SINE Alu -10 302 1 2036 60 53 21 chr17 44013 44296 -85394184 + AluSc SINE Alu 1 292 -17 766 79 4 2 chr17 44366 44607 -85393873 + AluSx SINE Alu 1 290 -19 291 106 0 0 chr17 44727 44774 -85393706 + Alu SINE Alu 254 300 -2 1786 167 7 7 chr17 44835 45140 -85393340 + AluJb SINE Alu 1 305 -7 2270 74 0 0 chr17 45631 45915 -85392565 + AluSq SINE Alu 1 284 -29 201 300 0 67 chr17 45992 46082 -85392398 + L3 LINE CR1 1409 1492 -85 782 240 39 0 chr17 46548 46581 -85391899 + L1MB3 LINE L1 5970 6000 -183 207 0 0 0 chr17 46581 46604 -85391876 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 782 240 39 0 chr17 46604 46774 -85391706 + L1MB3 LINE L1 6000 6181 -2 2168 93 3 3 chr17 46783 47083 -85391397 + AluSq SINE Alu 1 300 -13 753 167 173 0 chr17 47099 47249 -85391231 + AluJo SINE Alu 122 297 -15 411 270 218 40 chr17 47250 47502 -85390978 - L1ME4a LINE L1 -34 6087 5791 23 0 0 0 chr17 47764 47787 -85390693 + AT_rich Low_complexity Low_complexity 1 23 0 1993 124 10 17 chr17 47787 48086 -85390394 - AluSx SINE Alu -15 297 1 263 373 40 0 chr17 48215 48365 -85390115 - L2 LINE L2 -868 2446 2291 474 291 40 7 chr17 49074 49222 -85389258 - MIR SINE MIR -29 233 81 2149 110 3 0 chr17 49223 49523 -85388957 + AluSx SINE Alu 1 301 -11 895 175 0 0 chr17 50045 50199 -85388281 + AluJo SINE Alu 1 154 -158 2144 102 10 0 chr17 50865 51159 -85387321 - AluSc SINE Alu -12 297 1 1177 99 0 12 chr17 51165 51327 -85387153 - FRAM SINE Alu -17 159 1 1960 104 24 0 chr17 51443 51731 -85386749 - AluSx SINE Alu -17 295 1 1793 92 53 32 chr17 52804 53085 -85385395 + AluSg SINE Alu 9 295 -15 608 300 130 0 chr17 53573 53803 -85384677 - MIR SINE MIR -1 261 2 252 0 0 0 chr17 53902 53930 -85384550 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1789 152 11 0 chr17 53932 54208 -85384272 - AluJb SINE Alu -33 279 1 2345 80 3 0 chr17 55848 56149 -85382331 - AluSp SINE Alu -10 303 2 2188 101 30 0 chr17 57565 57863 -85380617 + AluSx SINE Alu 1 307 -5 2174 119 3 0 chr17 58306 58609 -85379871 + AluSx SINE Alu 1 304 -8 1038 106 0 0 chr17 58839 58980 -85379500 + AluJb SINE Alu 1 141 -171 26 30 0 0 chr17 58997 59030 -85379450 + AT_rich Low_complexity Low_complexity 1 33 0 324 0 0 0 chr17 59664 59700 -85378780 + (CA)n Simple_repeat Simple_repeat 2 37 0 1743 190 3 0 chr17 59780 60085 -85378395 + AluSx SINE Alu 1 306 -6 2535 33 0 0 chr17 60255 60554 -85377926 + AluY SINE Alu 1 299 -12 461 423 127 14 chr17 61732 62238 -85376242 + L3 LINE CR1 185 747 -830 404 42 0 0 chr17 62238 62286 -85376194 + AluY SINE Alu 155 202 -109 1828 101 8 8 chr17 62298 62555 -85375925 + AluSq SINE Alu 5 261 -52 932 64 29 81 chr17 62655 62751 -85375729 - MER30 DNA MER1_type -60 170 85 2226 101 3 0 chr17 62751 63047 -85375433 - AluSp SINE Alu -16 297 1 932 64 29 81 chr17 63047 63123 -85375357 - MER30 DNA MER1_type -145 85 7 410 263 47 52 chr17 63124 63337 -85375143 + L3 LINE CR1 1018 1229 -348 232 274 88 26 chr17 63530 63643 -85374837 + MLT1K LTR MaLR 97 216 -372 441 257 117 9 chr17 64000 64114 -85374366 + L1MC5 LINE L1 7458 7558 -403 2201 73 0 4 chr17 64114 64389 -85374091 + AluY SINE Alu 23 296 -15 441 257 117 9 chr17 64389 64488 -85373992 + L1MC5 LINE L1 7558 7694 -267 271 272 39 10 chr17 64580 64683 -85373797 + L1MC5 LINE L1 7822 7927 -34 863 192 23 6 chr17 64812 64989 -85373491 + AluJb SINE Alu 121 300 -12 2099 135 3 0 chr17 65058 65369 -85373111 + AluSx SINE Alu 1 312 0 682 268 41 41 chr17 65553 65796 -85372684 - MIR SINE MIR -10 252 10 2177 106 3 0 chr17 67346 67648 -85370832 - AluSp SINE Alu -10 303 1 2317 74 0 0 chr17 67831 68128 -85370352 + AluY SINE Alu 1 297 -14 497 113 38 0 chr17 68289 68369 -85370111 + AluS SINE Alu 1 83 -230 202 244 0 0 chr17 69421 69466 -85369014 + T-rich Low_complexity Low_complexity 1 45 0 565 103 0 0 chr17 70092 70170 -85368310 + AluSq/x SINE Alu 58 135 -178 2096 76 0 28 chr17 70170 70459 -85368021 + AluSx SINE Alu 1 281 -31 397 278 43 43 chr17 72266 72428 -85366052 + MIR3 SINE MIR 5 166 -42 420 287 237 20 chr17 72676 73168 -85365312 - L2 LINE L2 -16 3297 2688 1326 102 0 0 chr17 73243 73430 -85365050 - AluSg/x SINE Alu 0 312 126 2413 49 7 10 chr17 73430 73738 -85364742 - AluY SINE Alu -4 307 1 1795 154 16 3 chr17 73765 74070 -85364410 - AluJb SINE Alu -3 309 1 202 289 141 58 chr17 74078 74199 -85364281 - MIR SINE MIR -122 140 10 2407 83 0 0 chr17 74525 74837 -85363643 - AluSx SINE Alu 0 312 1 832 92 0 0 chr17 76480 76599 -85361881 - AluSx SINE Alu 0 312 194 1042 93 7 0 chr17 76600 76740 -85361740 - AluSx SINE Alu -171 141 1 1644 119 67 28 chr17 76810 77095 -85361385 - AluSg SINE Alu -14 296 1 2163 85 0 0 chr17 77209 77481 -85360999 - AluSc SINE Alu -37 272 1 245 196 0 36 chr17 77597 77653 -85360827 + MLT2D LTR ERVL 1 54 -360 6079 196 18 12 chr17 77656 78957 -85359523 + ERVL LTR ERVL 3031 4338 -1426 5980 167 25 3 chr17 79341 80456 -85358024 + ERVL LTR ERVL 4298 5437 -327 248 217 17 0 chr17 80457 80517 -85357963 - Tigger1 DNA MER2_type -2 2416 2356 2064 131 3 7 chr17 80517 80823 -85357657 + AluSx SINE Alu 1 305 -7 2134 109 3 0 chr17 80824 81126 -85357354 + AluY SINE Alu 1 303 -8 1749 137 53 14 chr17 81126 81661 -85356819 - Tigger1 DNA MER2_type -210 2208 1582 2019 147 0 0 chr17 81662 81961 -85356519 - AluJb SINE Alu -13 299 1 369 0 0 0 chr17 82901 82942 -85355538 + (TG)n Simple_repeat Simple_repeat 2 42 0 2415 64 0 0 chr17 82952 83248 -85355232 - AluY SINE Alu -15 296 1 2064 112 10 10 chr17 83296 83608 -85354872 + AluSx SINE Alu 1 312 0 997 104 8 0 chr17 83643 83777 -85354703 + AluSg/x SINE Alu 144 278 -32 8160 51 24 4 chr17 83777 84764 -85353716 - LTR13 LTR ERVK 0 1007 1 315 0 0 0 chr17 84772 84807 -85353673 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2048 98 0 33 chr17 85554 85860 -85352620 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 86297 86347 -85352133 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 86607 86761 -85351719 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 87068 87114 -85351366 + G-rich Low_complexity Low_complexity 6 51 0 377 253 86 21 chr17 87323 87496 -85350984 + Charlie2 DNA MER1_type 2423 2610 -252 2311 70 0 26 chr17 87496 87809 -85350671 - AluY SINE Alu -6 305 1 377 253 86 21 chr17 87809 87821 -85350659 + Charlie2 DNA MER1_type 2610 2620 -242 2540 40 0 0 chr17 87909 88206 -85350274 - AluY SINE Alu -14 297 1 848 239 24 0 chr17 88206 88419 -85350061 + Charlie2 DNA MER1_type 2604 2821 -41 244 290 160 10 chr17 88594 88694 -85349786 - MIR SINE MIR -54 208 94 300 281 49 0 chr17 88798 88880 -85349600 + MIR SINE MIR 98 183 -79 230 322 59 67 chr17 89837 90076 -85348404 + MER102a DNA MER1_type 85 321 -9 261 329 58 44 chr17 90646 90783 -85347697 - MIR SINE MIR -54 154 16 813 254 40 20 chr17 94487 94688 -85343792 + MIR SINE MIR 21 225 -37 23 0 0 0 chr17 99896 99919 -85338561 + AT_rich Low_complexity Low_complexity 1 23 0 1905 107 48 38 chr17 101850 102139 -85336341 + AluSg SINE Alu 1 292 -18 708 191 34 14 chr17 102139 102286 -85336194 + MER20 DNA MER1_type 69 218 -1 351 65 0 0 chr17 102684 102730 -85335750 + (TA)n Simple_repeat Simple_repeat 1 46 0 503 228 65 8 chr17 103658 103781 -85334699 - MIR SINE MIR -70 192 63 1800 61 5 0 chr17 104225 104439 -85334041 - AluY SINE Alu -13 298 84 1284 98 5 79 chr17 105503 105706 -85332774 + AluSg SINE Alu 1 188 -122 1609 84 10 0 chr17 105706 105908 -85332572 + AluSq SINE Alu 104 307 -6 1379 223 41 0 chr17 105909 106228 -85332252 + MER63 DNA MER1_type 680 1011 -49 2330 91 0 0 chr17 106253 106539 -85331941 - AluSx SINE Alu -26 286 1 1122 164 0 0 chr17 106913 107078 -85331402 + AluJb SINE Alu 137 301 -11 2098 101 39 3 chr17 107229 107515 -85330965 + AluSc SINE Alu 1 296 -13 213 272 47 6 chr17 107907 108076 -85330404 + (AGGTG)n Simple_repeat Simple_repeat 3 178 0 266 265 29 12 chr17 108114 108284 -85330196 + (AGGTG)n Simple_repeat Simple_repeat 1 173 0 2521 71 0 7 chr17 109383 109692 -85328788 - AluSq SINE Alu -6 307 1 238 116 47 0 chr17 109762 109805 -85328675 - L1MB3 LINE L1 -7 6176 6132 2313 102 0 10 chr17 109805 110108 -85328372 - AluSx SINE Alu -12 300 1 851 173 13 13 chr17 113254 113410 -85325070 + BC200 scRNA scRNA 1 156 -44 1602 132 100 48 chr17 113414 113703 -85324777 + AluJo SINE Alu 1 304 -8 2324 106 0 3 chr17 114002 114303 -85324177 + AluSq SINE Alu 1 300 -13 283 270 180 0 chr17 114650 114761 -85323719 - MIR SINE MIR -120 142 12 2318 93 3 6 chr17 115224 115535 -85322945 - AluSq SINE Alu -3 310 1 198 246 0 62 chr17 115566 115631 -85322849 + MIR3 SINE MIR 108 168 -40 240 318 93 6 chr17 115713 115872 -85322608 + MIR SINE MIR 20 191 -60 2290 125 0 0 chr17 116003 116314 -85322166 - AluSx SINE Alu -1 311 1 2140 97 41 3 chr17 117092 117382 -85321098 - AluSp SINE Alu -12 301 1 1252 114 0 16 chr17 117510 117694 -85320786 - AluSg/x SINE Alu -4 306 126 2106 130 0 3 chr17 117702 117995 -85320485 - AluJb SINE Alu -20 292 1 514 217 85 0 chr17 117996 118125 -85320355 - MIR SINE MIR -43 219 80 2310 114 0 0 chr17 118849 119156 -85319324 - AluSx SINE Alu -5 307 1 1230 209 25 48 chr17 119442 119757 -85318723 + AluJo SINE Alu 1 308 -4 932 244 59 59 chr17 119927 120011 -85318469 - MER33 DNA MER1_type -2261 324 241 2129 154 0 0 chr17 120011 120316 -85318164 + AluJo SINE Alu 6 310 -2 932 244 59 59 chr17 120316 120555 -85317925 - MER33 DNA MER1_type -2343 242 1 2133 102 9 25 chr17 120867 121182 -85317298 - AluSx SINE Alu -2 310 1 2225 111 0 3 chr17 121654 121952 -85316528 - AluSx SINE Alu -15 297 1 2241 122 3 0 chr17 122567 122871 -85315609 + AluSg SINE Alu 1 305 -5 2343 78 23 19 chr17 123132 123440 -85315040 + AluSg SINE Alu 1 309 -1 207 0 0 0 chr17 123845 123868 -85314612 + (T)n Simple_repeat Simple_repeat 1 23 0 2455 86 7 0 chr17 124205 124508 -85313972 - AluSx SINE Alu -7 305 1 365 97 32 0 chr17 124999 125061 -85313419 + GA-rich Low_complexity Low_complexity 3 66 0 290 212 21 88 chr17 125068 125261 -85313219 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 411 257 9 0 chr17 125313 125418 -85313062 + MLT2B1 LTR ERVL 1 106 -414 2032 144 7 3 chr17 125419 125725 -85312755 - AluSq SINE Alu -6 307 1 1691 184 3 7 chr17 125877 126171 -85312309 + AluJo SINE Alu 1 293 -19 280 274 20 89 chr17 126402 126548 -85311932 - MIR3 SINE MIR -58 150 15 1778 128 74 30 chr17 127180 127478 -85311002 + AluJb SINE Alu 1 311 -1 2338 101 3 3 chr17 127594 127901 -85310579 - AluSx SINE Alu -5 307 1 2631 32 9 25 chr17 128409 128725 -85309755 + AluY SINE Alu 1 311 0 2275 83 9 49 chr17 128890 129216 -85309264 - AluSq SINE Alu 0 313 1 1514 153 6 86 chr17 129967 130148 -85308332 - AluJo SINE Alu -10 302 108 450 0 0 0 chr17 130148 130198 -85308282 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2349 70 0 11 chr17 130198 130485 -85307995 - AluY SINE Alu -27 284 1 1514 153 6 86 chr17 130485 130628 -85307852 - AluJo SINE Alu -202 110 3 310 167 0 77 chr17 131299 131377 -85307103 - AluYa5 SINE Alu -119 182 111 2056 108 32 0 chr17 131377 131655 -85306825 + AluSx SINE Alu 10 296 -16 2438 57 0 0 chr17 131657 131975 -85306505 + AluY SINE Alu 1 318 0 1935 244 98 51 chr17 132322 132900 -85305580 - L1ME2 LINE L1 -10 6154 5528 1550 165 85 0 chr17 132900 133172 -85305308 + AluJb SINE Alu 1 295 -17 1935 244 98 51 chr17 133172 133375 -85305105 - L1ME2 LINE L1 -636 5528 5336 2108 93 11 0 chr17 134839 135108 -85303372 + AluSx SINE Alu 1 272 -40 2076 51 4 19 chr17 135208 135491 -85302989 + AluY SINE Alu 32 310 0 1764 176 0 38 chr17 135565 135878 -85302602 - AluJb SINE Alu -11 301 1 792 233 30 15 chr17 136175 136377 -85302103 - MER20 DNA MER1_type -14 205 1 2370 56 0 3 chr17 137546 137876 -85300604 + AluY SINE Alu 1 329 0 1768 104 120 0 chr17 138428 138687 -85299793 - AluSx SINE Alu -16 296 7 1766 135 53 0 chr17 139712 139993 -85298487 - AluSx SINE Alu -16 296 1 268 338 14 45 chr17 140108 140293 -85298187 - L1MC/D LINE L1 -299 5822 5688 2373 88 7 0 chr17 140293 140590 -85297890 - AluSx SINE Alu -12 300 2 268 338 14 45 chr17 140590 140661 -85297819 - L1MC/D LINE L1 -433 5688 5616 1370 203 29 22 chr17 142300 142616 -85295864 - L1MC2 LINE L1 -9 6335 6018 275 229 134 89 chr17 142616 142773 -85295707 + MER20 DNA MER1_type 53 216 -3 281 264 0 42 chr17 143205 143349 -85295131 + (GGTTG)n Simple_repeat Simple_repeat 2 139 0 232 300 0 39 chr17 143389 143569 -85294911 + (GGTTG)n Simple_repeat Simple_repeat 2 174 0 195 222 22 0 chr17 143768 143813 -85294667 + MIR SINE MIR 105 150 -112 1707 149 46 4 chr17 143993 144255 -85294225 + AluJb SINE Alu 1 273 -39 372 234 0 0 chr17 144257 144351 -85294129 + (CAGA)n Simple_repeat Simple_repeat 3 96 0 2343 78 0 26 chr17 144680 144987 -85293493 + AluY SINE Alu 1 299 -12 761 35 43 9 chr17 145573 145689 -85292791 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1843 98 78 0 chr17 145691 145946 -85292534 - AluSx SINE Alu -37 275 1 219 296 70 0 chr17 146207 146278 -85292202 - MIR SINE MIR -173 89 14 554 91 0 71 chr17 146376 146475 -85292005 - AluSp/q SINE Alu -10 303 212 290 154 19 0 chr17 146783 146835 -85291645 - MSTA LTR MaLR 0 428 376 * 395 216 0 0 chr17 146833 146907 -85291573 - AluJ/FRAM SINE Alu -3 299 226 2301 117 8 34 chr17 146924 146974 -85291506 - THE1C LTR MaLR 0 375 325 2225 99 14 0 chr17 146974 147267 -85291213 - AluSg SINE Alu -13 297 1 2301 117 8 34 chr17 147267 147601 -85290879 - THE1C LTR MaLR -50 325 1 2220 102 17 0 chr17 148064 148359 -85290121 - AluSx SINE Alu -12 300 1 691 205 40 145 chr17 148359 148656 -85289824 - MLT2D LTR ERVL -49 365 100 502 105 26 0 chr17 148656 148732 -85289748 + AluS SINE Alu 1 78 -234 2300 96 3 0 chr17 148889 149181 -85289299 + AluSx SINE Alu 1 293 -19 332 156 26 39 chr17 150161 150238 -85288242 - L1MC4 LINE L1 0 8042 7967 219 204 61 0 chr17 150591 150640 -85287840 - MER5A DNA MER1_type -133 56 5 1196 208 4 49 chr17 150698 150790 -85287690 - MER8 DNA MER2_type 0 239 144 1881 143 0 7 chr17 150790 151083 -85287397 + AluJo SINE Alu 1 291 -21 2321 100 10 0 chr17 151086 151385 -85287095 + AluY SINE Alu 1 302 -9 1196 208 4 49 chr17 151385 151533 -85286947 - MER8 DNA MER2_type -97 142 6 1912 284 76 41 chr17 151533 152014 -85286466 - L1MC4 LINE L1 -156 7886 7424 1764 171 0 26 chr17 152014 152319 -85286161 - AluJo SINE Alu -15 297 1 1912 284 76 41 chr17 152319 152422 -85286058 - L1MC4 LINE L1 -618 7424 7326 2075 138 7 13 chr17 152422 152729 -85285751 + AluSx SINE Alu 1 303 -9 1912 284 76 41 chr17 152729 153118 -85285362 - L1MC4 LINE L1 -716 7326 6952 2015 132 0 0 chr17 153118 153414 -85285066 + AluSx SINE Alu 1 296 -16 1912 284 76 41 chr17 153414 153858 -85284622 - L1MC4 LINE L1 -1090 6952 6116 1306 156 0 0 chr17 153858 154070 -85284410 + AluSx SINE Alu 1 212 -100 430 121 0 0 chr17 154070 154128 -85284352 + AluSg/x SINE Alu 76 133 -176 1920 131 0 0 chr17 154128 154434 -85284046 + AluSx SINE Alu 1 306 0 2317 80 0 6 chr17 155793 156106 -85282374 - AluY SINE Alu 0 311 1 231 277 67 0 chr17 156114 156233 -85282247 + MER113 DNA MER1_type? 4 130 -391 869 165 0 0 chr17 156233 156366 -85282114 + FLAM_C SINE Alu 1 133 0 1390 115 5 10 chr17 156374 156582 -85281898 + AluJb SINE Alu 94 300 -12 680 278 0 6 chr17 156588 156764 -85281716 + MER113 DNA MER1_type? 296 470 -51 2222 107 3 0 chr17 156992 157301 -85281179 + AluSx SINE Alu 1 310 -2 800 250 38 0 chr17 157319 157503 -85280977 + MLT1A1 LTR MaLR 175 365 0 1368 173 4 15 chr17 157508 157768 -85280712 + MLT1A1-int LTR MaLR 2 258 -1477 2060 90 37 10 chr17 157768 158068 -85280412 + AluSx SINE Alu 1 308 -4 2204 83 10 0 chr17 158345 158635 -85279845 - AluSc SINE Alu -16 293 1 1647 161 3 10 chr17 159263 159554 -85278926 - AluJo SINE Alu -23 289 1 2241 98 0 0 chr17 159575 159871 -85278609 - AluSx SINE Alu -16 296 1 2360 59 0 23 chr17 159875 160181 -85278299 - AluY SINE Alu -12 299 1 327 275 56 112 chr17 160367 160528 -85277952 - L2 LINE L2 0 3313 3179 2140 88 7 3 chr17 160528 160824 -85277656 + AluSg SINE Alu 1 297 -13 327 275 56 112 chr17 160824 161000 -85277480 - L2 LINE L2 -134 3179 2995 1960 110 27 14 chr17 161086 161378 -85277102 - AluSx SINE Alu -16 296 1 1209 120 0 0 chr17 161403 161570 -85276910 + AluY SINE Alu 133 299 -12 264 237 34 0 chr17 161579 161638 -85276842 - MER5A DNA MER1_type -64 125 65 1232 186 8 27 chr17 162447 162710 -85275770 - AluJo SINE Alu -43 269 12 1981 136 3 3 chr17 162726 163100 -85275380 + AluSg SINE Alu 1 374 0 1806 96 3 108 chr17 163586 163921 -85274559 + AluSp SINE Alu 1 300 -13 2133 68 10 3 chr17 163977 164269 -85274211 - AluY SINE Alu -17 294 1 317 429 7 0 chr17 164293 164447 -85274033 - L2 LINE L2 -7 3265 3111 187 274 0 48 chr17 164486 164548 -85273932 + MIR SINE MIR 204 262 0 289 326 18 54 chr17 164962 165186 -85273294 - L2 LINE L2 -222 3050 2835 287 226 0 57 chr17 165194 165318 -85273162 + G-rich Low_complexity Low_complexity 3 119 0 294 270 180 0 chr17 166422 166533 -85271947 + MIR SINE MIR 12 142 -120 2221 93 3 6 chr17 166574 166887 -85271593 - AluSp SINE Alu -1 312 1 1026 126 0 0 chr17 166977 167128 -85271352 - FRAM SINE Alu -26 150 1 254 284 59 10 chr17 167360 167462 -85271018 + L2 LINE L2 3111 3217 -96 2434 65 0 3 chr17 167612 167918 -85270562 + AluSx SINE Alu 1 305 -7 1630 164 51 0 chr17 167997 168290 -85270190 - AluJb SINE Alu -4 308 1 224 309 62 10 chr17 168290 168387 -85270093 - L2 LINE L2 -219 3053 2952 216 320 40 10 chr17 168423 168523 -85269957 - L2 LINE L2 -219 3053 2951 409 238 79 0 chr17 168631 168732 -85269748 + MER20 DNA MER1_type 111 219 0 2094 109 0 16 chr17 168890 169202 -85269278 + AluSx SINE Alu 1 307 -5 873 166 43 21 chr17 170332 170519 -85267961 - AluJo SINE Alu -3 309 119 2468 60 0 0 chr17 170931 171233 -85267247 - AluY SINE Alu -9 302 1 1070 179 82 0 chr17 171322 171517 -85266963 + AluSg SINE Alu 1 211 -99 422 73 0 0 chr17 171517 171572 -85266908 + AluSq/x SINE Alu 78 132 -181 1573 118 114 0 chr17 171575 171820 -85266660 + AluSg SINE Alu 1 273 -37 342 170 0 0 chr17 171935 171988 -85266492 - Alu SINE Alu -16 286 234 351 270 42 112 chr17 172097 172338 -85266142 + L1ME1 LINE L1 5896 6119 -47 347 251 61 28 chr17 172338 172464 -85266016 + L1ME1 LINE L1 6046 6331 -3 2395 66 3 3 chr17 172482 172785 -85265695 + AluY SINE Alu 1 303 -8 1994 152 0 0 chr17 172793 173103 -85265377 + AluSx SINE Alu 1 310 -2 1305 96 5 24 chr17 173215 173423 -85265057 - AluSx SINE Alu -108 204 1 1906 128 7 0 chr17 175104 175400 -85263080 - AluSx SINE Alu -14 298 1 1547 84 13 4 chr17 175693 175920 -85262560 + AluY SINE Alu 1 229 -82 629 99 0 0 chr17 176021 176112 -85262368 - AluJ/FLAM SINE Alu -220 92 2 2328 64 7 3 chr17 176960 177257 -85261223 + AluY SINE Alu 1 298 -13 2302 56 3 30 chr17 177665 177970 -85260510 + AluY SINE Alu 1 297 -14 1642 115 13 102 chr17 178350 178703 -85259777 + AluSx SINE Alu 1 325 0 626 148 109 47 chr17 178703 178831 -85259649 + MER2 DNA MER2_type 3 138 -207 744 168 0 8 chr17 178840 178971 -85259509 - FLAM_C SINE Alu -3 130 1 182 269 191 28 chr17 178979 179120 -85259360 + L2 LINE L2 1506 1669 -1645 2215 94 3 0 chr17 179132 179430 -85259050 - AluSq SINE Alu -14 299 1 615 338 52 7 chr17 179647 179952 -85258528 + L2 LINE L2 2987 3305 -8 5233 66 8 0 chr17 180037 180690 -85257790 + L1PA8 LINE L1 5514 6171 -1 2065 90 7 0 chr17 180696 180973 -85257507 + AluSx SINE Alu 3 281 -31 251 311 82 7 chr17 180987 181122 -85257358 + L1ME LINE L1 5396 5540 -581 508 276 112 19 chr17 182127 182341 -85256139 + MIR SINE MIR 23 256 -6 652 139 124 22 chr17 182364 182501 -85255979 - AluJb SINE Alu -31 281 131 252 0 0 0 chr17 182503 182531 -85255949 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1549 181 4 0 chr17 182540 182817 -85255663 - AluJo SINE Alu -34 278 1 2229 90 3 3 chr17 183660 183972 -85254508 - AluSx SINE Alu 0 312 1 271 170 0 0 chr17 184134 184187 -85254293 + L1MB4 LINE L1 6128 6180 0 721 288 56 0 chr17 184473 184688 -85253792 + MIR SINE MIR 13 239 -23 2308 84 0 10 chr17 184691 185001 -85253479 + AluSq SINE Alu 1 307 -6 1716 129 50 4 chr17 185073 185353 -85253127 + AluJb SINE Alu 7 299 -13 2196 110 7 0 chr17 185353 185662 -85252818 + AluSx SINE Alu 1 311 -1 2009 96 50 0 chr17 187727 188007 -85250473 - AluSx SINE Alu -18 294 1 247 299 93 10 chr17 188214 188311 -85250169 + L2 LINE L2 3163 3267 -5 2145 104 0 10 chr17 188817 189124 -85249356 + AluSx SINE Alu 1 304 -8 3224 113 10 12 chr17 190310 190807 -85247673 + LTR10D LTR ERV1 1 496 -17 1985 108 40 0 chr17 190812 191108 -85247372 - AluSg1 SINE Alu 0 309 2 1867 103 10 61 chr17 191158 191469 -85247011 - AluSg SINE Alu -14 296 2 2324 100 0 0 chr17 192372 192682 -85245798 + AluSg SINE Alu 1 310 0 2148 92 0 3 chr17 194174 194598 -85243882 - AluSq SINE Alu 0 423 1 2063 106 3 0 chr17 195101 195393 -85243087 - AluSx SINE Alu -13 299 7 548 288 123 14 chr17 196061 196273 -85242207 - MIR SINE MIR -19 243 9 2300 64 7 0 chr17 196612 196908 -85241572 + AluY SINE Alu 1 298 -13 2135 111 7 0 chr17 197387 197685 -85240795 + AluSx SINE Alu 1 300 -12 2311 98 0 0 chr17 197685 197991 -85240489 + AluSx SINE Alu 1 306 -6 2437 59 0 3 chr17 198441 198747 -85239733 - AluY SINE Alu -6 305 1 702 49 0 0 chr17 198747 198829 -85239651 - AluY SINE Alu -167 144 63 1195 120 71 0 chr17 198829 199013 -85239467 - AluSx SINE Alu -115 197 1 1555 155 50 7 chr17 200843 201140 -85237340 - AluJo SINE Alu -2 310 1 206 246 0 155 chr17 201152 201294 -85237186 - MER5A DNA MER1_type -63 126 7 437 197 49 38 chr17 201401 201540 -85236940 + MER5B DNA MER1_type 56 178 0 2326 68 0 26 chr17 201741 202051 -85236429 + AluY SINE Alu 1 302 -9 2296 97 0 0 chr17 202673 202971 -85235509 - AluSx SINE Alu -14 298 1 2057 138 0 0 chr17 202974 203270 -85235210 - AluSx SINE Alu -16 296 1 554 204 0 10 chr17 203377 203480 -85235000 - FLAM_A SINE Alu -8 134 33 2295 98 7 0 chr17 203784 204089 -85234391 - AluSq SINE Alu -6 307 1 2234 87 20 0 chr17 204313 204612 -85233868 - AluY SINE Alu -6 305 1 322 251 61 28 chr17 204630 204756 -85233724 - L1ME1 LINE L1 -3 6331 6046 283 261 46 116 chr17 204756 204997 -85233483 - L1ME1 LINE L1 -47 6119 5896 2074 115 3 0 chr17 205696 205983 -85232497 + AluSx SINE Alu 1 288 -24 1306 82 0 0 chr17 207210 207381 -85231099 + AluSg/x SINE Alu 138 308 -4 189 0 0 0 chr17 208695 208716 -85229764 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1134 164 0 0 chr17 209342 209525 -85228955 + AluJo SINE Alu 112 294 -18 2312 76 10 3 chr17 209915 210217 -85228263 + AluSx SINE Alu 9 312 0 1806 243 98 51 chr17 210566 211144 -85227336 - L1ME2 LINE L1 -10 6154 5528 1426 167 93 0 chr17 211144 211414 -85227066 + AluJb SINE Alu 1 295 -17 1806 243 98 51 chr17 211414 211617 -85226863 - L1ME2 LINE L1 -636 5528 5336 2282 95 10 0 chr17 213081 213386 -85225094 + AluSx SINE Alu 1 308 -4 2291 84 3 0 chr17 213488 213784 -85224696 - AluSq SINE Alu -16 297 1 2092 98 0 0 chr17 214608 214882 -85223598 - AluSq SINE Alu -39 274 1 236 320 20 68 chr17 215271 215521 -85222959 + L2 LINE L2 2817 3054 -218 188 274 0 48 chr17 215930 215992 -85222488 - MIR SINE MIR 0 262 204 334 429 7 0 chr17 216031 216185 -85222295 + L2 LINE L2 3111 3265 -7 1488 64 5 0 chr17 216209 216397 -85222083 + AluY SINE Alu 1 189 -122 204 320 190 34 chr17 218263 218532 -85219948 + L2 LINE L2 2932 3242 -30 347 288 129 71 chr17 219610 220189 -85218291 + L1M2 LINE L1 757 1369 -5480 303 313 98 0 chr17 221398 221510 -85216970 + MIR SINE MIR 52 174 -88 2024 131 0 3 chr17 222065 222362 -85216118 + AluSx SINE Alu 1 296 -16 201 224 0 0 chr17 223530 223579 -85214901 - MIR SINE MIR -79 129 81 695 186 0 9 chr17 226131 226244 -85212236 - AluJb SINE Alu -195 117 6 2224 88 14 3 chr17 226580 226876 -85211604 + AluSx SINE Alu 1 299 -13 2160 97 0 26 chr17 226895 227203 -85211277 + AluSx SINE Alu 1 300 -12 340 161 0 0 chr17 228648 228704 -85209776 - AluS SINE Alu -244 57 2 2135 147 144 0 chr17 228865 229239 -85209241 + MSTA LTR MaLR 1 428 0 1799 177 0 6 chr17 229253 229564 -85208916 - AluSx SINE Alu -3 309 1 1633 125 29 96 chr17 229592 229905 -85208575 + AluJo SINE Alu 2 293 -19 209 281 226 7 chr17 231735 231881 -85206599 - L2 LINE L2 -4 3268 3091 2204 134 0 0 chr17 232060 232367 -85206113 + AluSx SINE Alu 1 307 -5 794 105 48 32 chr17 233003 233127 -85205353 + FLAM_C SINE Alu 1 126 -17 1602 166 32 3 chr17 233143 233426 -85205054 + AluJo SINE Alu 1 291 -21 2153 82 14 0 chr17 233626 233934 -85204546 + AluSg SINE Alu 1 312 0 189 359 13 13 chr17 234423 234501 -85203979 + MIR SINE MIR 67 144 -118 412 305 26 26 chr17 238135 238286 -85200194 - MIR3 SINE MIR -55 153 3 257 268 0 0 chr17 238695 238751 -85199729 + C-rich Low_complexity Low_complexity 4 59 0 1858 147 0 10 chr17 238887 239186 -85199294 + AluJb SINE Alu 4 299 -13 721 283 91 8 chr17 240273 240634 -85197846 - MER90 LTR ERV1 -63 551 161 214 371 0 0 chr17 240798 240860 -85197620 + L2 LINE L2 3242 3303 -10 2123 95 3 14 chr17 240860 241155 -85197325 + AluSx SINE Alu 1 292 -20 319 234 36 36 chr17 241401 241512 -85196968 - MER103 DNA DNA -46 120 10 503 243 40 7 chr17 242565 242717 -85195763 + L1ME4a LINE L1 5961 6117 -4 999 121 0 0 chr17 243917 244058 -85194422 - AluSq/x SINE Alu -172 141 1 2214 166 18 2 chr17 244058 244497 -85193983 - L1ME1 LINE L1 -211 5955 5510 467 270 20 77 chr17 244521 244717 -85193763 - MIR SINE MIR 0 262 78 364 301 163 44 chr17 244730 244997 -85193483 - L2 LINE L2 -1 3312 3078 2394 89 0 0 chr17 244997 245310 -85193170 - AluSp SINE Alu 0 313 1 364 301 163 44 chr17 245310 245582 -85192898 - L2 LINE L2 -235 3078 2708 2021 116 3 32 chr17 246160 246465 -85192015 + AluSx SINE Alu 1 297 -10 369 0 0 0 chr17 246465 246506 -85191974 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1108 140 0 0 chr17 246511 246675 -85191805 + AluSg/x SINE Alu 132 295 -15 1408 120 9 40 chr17 248283 248508 -85189972 + AluSg/x SINE Alu 95 312 0 2093 122 3 0 chr17 249435 249731 -85188749 - AluSx SINE Alu -11 301 5 2074 97 0 27 chr17 249735 250033 -85188447 - AluSx SINE Alu -22 290 1 1815 189 20 40 chr17 250067 250421 -85188059 + MER7A DNA MER2_type 2 346 0 563 165 0 10 chr17 250644 250741 -85187739 + AluS SINE Alu 1 96 -216 1557 96 0 26 chr17 250864 251094 -85187386 - AluSg SINE Alu -86 224 1 567 15 0 0 chr17 251336 251424 -85187056 + AluY SINE Alu 217 304 0 2356 55 7 0 chr17 251438 251727 -85186753 + AluY SINE Alu 5 295 -16 847 11 30 57 chr17 251727 251979 -85186501 + (TA)n Simple_repeat Simple_repeat 1 245 0 382 220 0 51 chr17 252829 252947 -85185533 + MER20B DNA MER1_type 31 142 -641 1148 128 0 0 chr17 254227 254391 -85184089 - AluSg/x SINE Alu -15 297 134 405 0 0 0 chr17 254396 254441 -85184039 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1941 114 7 23 chr17 254441 254742 -85183738 - AluSx SINE Alu -10 297 1 358 298 111 65 chr17 255491 255592 -85182888 + L2 LINE L2 2927 3022 -291 2388 89 0 0 chr17 255592 255905 -85182575 + AluSp SINE Alu 1 313 0 358 298 111 65 chr17 255905 256172 -85182308 + L2 LINE L2 3022 3312 -1 463 270 20 77 chr17 256185 256381 -85182099 + MIR SINE MIR 78 262 0 2660 165 63 23 chr17 256405 256844 -85181636 + L1ME1 LINE L1 5510 5977 -189 2340 91 0 0 chr17 256844 257151 -85181329 + AluSx SINE Alu 1 307 -5 2660 165 63 23 chr17 257151 257268 -85181212 + L1ME1 LINE L1 5977 6088 -78 6441 50 16 32 chr17 257620 258496 -85179984 - SVA Other Other 0 1386 525 461 289 23 2 chr17 259217 259387 -85179093 - MIR SINE MIR -41 221 44 523 206 41 0 chr17 260531 260628 -85177852 - Tigger3(Golem) DNA MER2_type 0 3029 2929 1701 118 103 79 chr17 260631 260960 -85177520 - MER1B DNA MER1_type 0 337 1 365 218 26 0 chr17 260977 261055 -85177425 - Tigger3(Golem) DNA MER2_type -2949 80 1 408 311 141 6 chr17 261120 261297 -85177183 - MIR SINE MIR -53 209 9 899 278 51 88 chr17 261304 261794 -85176686 + L2 LINE L2 2399 2870 -444 265 328 107 6 chr17 262113 262430 -85176050 + L2 LINE L2 2887 3307 -6 331 311 131 39 chr17 262438 262698 -85175782 + L2 LINE L2 2939 3222 -50 1189 171 0 0 chr17 262833 263020 -85175460 + AluJo SINE Alu 1 187 -125 2095 112 10 0 chr17 266139 266442 -85172038 - AluSx SINE Alu -6 306 1 269 324 118 0 chr17 266863 266965 -85171515 - MIR SINE MIR -72 190 77 484 291 86 83 chr17 267195 267556 -85170924 - L2 LINE L2 -1 3271 2910 821 159 0 0 chr17 268069 268195 -85170285 - FLAM_C SINE Alu -16 127 2 2030 188 124 8 chr17 268197 268739 -85169741 - L1MC4a LINE L1 -289 7519 6940 1533 172 39 26 chr17 268745 269053 -85169427 + AluJb SINE Alu 1 312 0 1051 129 13 258 chr17 271427 271970 -85166510 + L1MC4 LINE L1 7491 7900 -142 1129 165 37 0 chr17 271975 272163 -85166317 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 272163 272206 -85166274 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 183 205 0 0 chr17 272206 272245 -85166235 + A-rich Low_complexity Low_complexity 5 43 0 423 245 26 40 chr17 272246 272397 -85166083 + L1MC4 LINE L1 7892 8040 -2 408 40 0 0 chr17 272407 272457 -85166023 + (TCTCCC)n Simple_repeat Simple_repeat 6 55 0 285 149 0 0 chr17 272579 272626 -85165854 - AluSp SINE Alu -128 175 129 * 354 137 0 0 chr17 272625 272676 -85165804 - AluSp SINE Alu -124 179 129 254 128 85 0 chr17 272675 272722 -85165758 - AluJ/F(R)AM SINE Alu -123 179 129 * 285 184 20 0 chr17 272721 272770 -85165710 - AluSp SINE Alu -124 179 130 346 137 0 0 chr17 272770 272821 -85165659 - AluJ/F(R)AM SINE Alu -123 179 129 243 149 85 0 chr17 272820 272867 -85165613 - AluY SINE Alu -123 178 128 * 262 200 20 0 chr17 272866 272916 -85165564 - AluJ/F(R)AM SINE Alu -123 179 129 * 305 62 83 0 chr17 272915 272963 -85165517 - AluY SINE Alu -123 178 127 269 89 89 0 chr17 272963 273008 -85165472 - AluY SINE Alu -125 176 128 * 296 160 20 0 chr17 273007 273057 -85165423 - AluJ/F(R)AM SINE Alu -123 179 129 * 359 98 0 0 chr17 273056 273107 -85165373 - AluJ/F(R)AM SINE Alu -123 179 129 * 378 98 0 0 chr17 273106 273157 -85165323 - AluJ/F(R)AM SINE Alu -123 179 129 331 120 20 0 chr17 273156 273206 -85165274 - AluJ/F(R)AM SINE Alu -123 179 129 * 267 106 85 0 chr17 273205 273252 -85165228 - AluYa5 SINE Alu -123 178 128 * 264 106 85 0 chr17 273251 273298 -85165182 - AluY SINE Alu -123 178 128 * 271 200 20 0 chr17 273297 273347 -85165133 - AluJ/F(R)AM SINE Alu -123 179 129 * 363 98 0 0 chr17 273346 273397 -85165083 - AluJ/F(R)AM SINE Alu -123 179 129 363 224 5 42 chr17 273396 273596 -85164884 - AluJ/F(R)AM SINE Alu -123 179 129 349 118 0 0 chr17 273595 273646 -85164834 - AluSp SINE Alu -124 179 129 * 352 118 0 0 chr17 273645 273696 -85164784 - AluJ/F(R)AM SINE Alu -123 179 129 352 118 0 0 chr17 273695 273746 -85164734 - AluSc SINE Alu -122 177 127 * 363 192 20 74 chr17 273745 274046 -85164434 - AluSc SINE Alu -122 177 127 556 93 0 0 chr17 274727 274802 -85163678 - Alu SINE Alu -9 302 228 973 158 0 6 chr17 274803 274961 -85163519 - AluSq SINE Alu -156 157 1 321 109 0 0 chr17 275266 275312 -85163168 - Alu SINE Alu -254 46 1 378 314 51 40 chr17 275325 275599 -85162881 - L1ME LINE L1 -302 5819 5543 309 281 47 0 chr17 275679 275807 -85162673 - L1ME LINE L1 -2651 5391 5258 2207 97 3 10 chr17 275987 276297 -85162183 + AluSx SINE Alu 5 312 0 200 128 64 21 chr17 276503 276550 -85161930 + CT-rich Low_complexity Low_complexity 4 52 0 1387 107 62 9 chr17 276818 277042 -85161438 - AluJo SINE Alu -76 236 1 560 190 20 0 chr17 277940 278040 -85160440 + AluSg/x SINE Alu 211 312 0 358 293 156 6 chr17 280955 281122 -85157358 - L1ME4a LINE L1 0 6121 5930 1441 249 51 35 chr17 281140 281627 -85156853 - L1MB7 LINE L1 -19 6165 5671 1407 222 43 0 chr17 283417 283746 -85154734 - L1ME4a LINE L1 -456 5728 5386 1731 72 0 0 chr17 283764 283985 -85154495 + AluSq SINE Alu 1 221 -92 2310 69 3 10 chr17 284687 284992 -85153488 - AluSc SINE Alu -6 303 1 319 272 48 0 chr17 285106 285209 -85153271 + MIR SINE MIR 100 207 -55 1917 121 0 7 chr17 285330 285619 -85152861 - AluJb SINE Alu -25 287 1 2307 76 3 3 chr17 285904 286208 -85152272 - AluY SINE Alu -7 304 1 27 0 0 0 chr17 286276 286303 -85152177 + AT_rich Low_complexity Low_complexity 1 27 0 371 310 187 0 chr17 286308 286463 -85152017 - MER5A DNA MER1_type -2 187 4 431 351 52 60 chr17 286811 287159 -85151321 - L2 LINE L2 0 3272 2928 2137 88 0 0 chr17 288449 288722 -85149758 + AluSq SINE Alu 6 278 -35 345 78 4 4 chr17 288722 288780 -85149700 - Alu SINE Alu -256 44 1 2176 113 0 3 chr17 289223 289534 -85148946 - AluSx SINE Alu -2 310 1 2119 99 3 7 chr17 289534 289826 -85148654 - AluSg SINE Alu -18 292 1 572 228 6 10 chr17 290452 290956 -85147524 + (CA)n Simple_repeat Simple_repeat 1 502 0 2526 46 0 0 chr17 291286 291590 -85146890 + AluY SINE Alu 1 304 -7 292 298 35 0 chr17 292338 292452 -85146028 + CT-rich Low_complexity Low_complexity 3 120 0 2177 96 3 6 chr17 292591 292903 -85145577 - AluSx SINE Alu -1 311 1 2182 105 0 7 chr17 295954 296258 -85142222 + AluSx SINE Alu 1 302 -10 2122 93 28 0 chr17 296340 296631 -85141849 + AluSx SINE Alu 1 299 -13 390 100 0 0 chr17 297970 298030 -85140450 + (TG)n Simple_repeat Simple_repeat 1 60 0 226 252 55 84 chr17 299027 299076 -85139404 - MIR SINE MIR -7 255 206 1864 89 0 4 chr17 299076 299345 -85139135 - AluSx SINE Alu 0 305 38 226 252 55 84 chr17 299345 299472 -85139008 - MIR SINE MIR -56 206 85 1298 82 0 0 chr17 300491 300662 -85137818 + AluSg/x SINE Alu 136 306 -4 189 0 0 0 chr17 301978 301999 -85136481 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1131 158 0 0 chr17 302626 302809 -85135671 + AluJo SINE Alu 112 294 -18 2369 66 10 3 chr17 303198 303501 -85134979 + AluSx SINE Alu 6 310 -2 2480 73 0 0 chr17 304808 305108 -85133372 - AluSx SINE Alu -12 300 1 2073 105 63 0 chr17 306673 306959 -85131521 - AluSx SINE Alu -8 304 1 2238 100 3 7 chr17 308330 308630 -85129850 - AluSg SINE Alu -11 299 1 738 171 8 0 chr17 309000 309129 -85129351 + FLAM_C SINE Alu 4 133 0 1229 37 0 0 chr17 310360 310494 -85127986 + AluY SINE Alu 1 134 -177 2197 70 49 7 chr17 310494 310780 -85127700 + AluY SINE Alu 1 298 -13 2309 46 49 7 chr17 311451 311736 -85126744 - AluY SINE Alu -14 297 1 313 68 0 0 chr17 311736 311780 -85126700 - Alu SINE Alu -264 44 1 * 353 94 16 16 chr17 311780 311824 -85126656 - AluS SINE Alu -259 44 1 182 292 191 0 chr17 313641 313730 -85124750 - L2 LINE L2 -37 3276 3171 268 320 61 53 chr17 314444 314672 -85123808 - L2 LINE L2 -462 2852 2623 876 169 0 0 chr17 315817 315947 -85122533 + FLAM_C SINE Alu 1 130 -13 514 265 116 23 chr17 315961 316176 -85122304 - MIR SINE MIR -6 256 22 815 157 0 50 chr17 316324 316464 -85122016 + FLAM_C SINE Alu 1 133 0 1732 156 10 30 chr17 316493 316795 -85121685 - AluJb SINE Alu -16 296 1 2317 120 0 0 chr17 317093 317401 -85121079 + AluSx SINE Alu 1 308 -4 482 297 102 61 chr17 317481 317679 -85120801 - L1ME4a LINE L1 -127 5994 5806 2187 99 0 33 chr17 317679 317981 -85120499 - AluSq SINE Alu -21 292 1 482 297 102 61 chr17 317981 318233 -85120247 - L1ME4a LINE L1 -315 5806 5511 2160 101 14 14 chr17 318233 318367 -85120113 + AluSg SINE Alu 1 134 -174 2365 94 0 7 chr17 318367 318674 -85119806 + AluY SINE Alu 1 305 -6 2160 101 14 14 chr17 318674 318847 -85119633 + AluSg SINE Alu 133 308 0 482 297 102 61 chr17 318847 318980 -85119500 - L1ME4a LINE L1 -610 5511 5385 22 35 0 0 chr17 319508 319537 -85118943 + AT_rich Low_complexity Low_complexity 1 29 0 2149 98 28 0 chr17 321305 321592 -85116888 + AluSx SINE Alu 1 295 -17 933 37 0 0 chr17 321954 322062 -85116418 + AluSq/x SINE Alu 1 108 -204 241 250 0 0 chr17 323040 323088 -85115392 - L2 LINE L2 -95 3218 3171 191 342 40 13 chr17 323326 323402 -85115078 - L2 LINE L2 -1172 2142 2065 2340 91 0 7 chr17 323726 324024 -85114456 + AluSx SINE Alu 6 301 -11 1769 63 5 14 chr17 324178 324399 -85114081 - AluY SINE Alu -8 303 85 248 312 9 28 chr17 324589 324698 -85113782 - L2 LINE L2 -507 2807 2701 2623 51 0 10 chr17 324745 325059 -85113421 - AluY SINE Alu 0 311 1 274 250 159 0 chr17 325201 325289 -85113191 - MIR SINE MIR -115 147 46 2214 110 0 27 chr17 325289 325590 -85112890 - AluSq SINE Alu -16 297 5 2226 127 3 6 chr17 325595 325909 -85112571 - AluSq SINE Alu 0 313 1 1296 255 56 32 chr17 326529 326941 -85111539 - MER21B LTR ERV1 -113 750 329 545 221 79 0 chr17 326968 327108 -85111372 - MER21B LTR ERV1 -615 248 98 386 220 67 47 chr17 327080 327235 -85111245 - MER21B LTR ERV1 -407 198 5 * 2131 126 0 0 chr17 327289 327582 -85110898 - AluSx SINE Alu -19 293 1 832 248 82 40 chr17 328107 328588 -85109892 - L2 LINE L2 -225 3088 2587 441 291 137 21 chr17 329390 329631 -85108849 - MLT1L LTR MaLR -8 607 339 1010 144 58 0 chr17 329660 329833 -85108647 - AluSg/x SINE Alu -9 301 119 2251 105 0 3 chr17 329859 330155 -85108325 - AluSx SINE Alu -17 295 1 444 247 153 13 chr17 330167 330317 -85108163 - MLT1L LTR MaLR -326 289 119 348 229 46 9 chr17 331399 331508 -85106972 - L1ME4a LINE L1 -63 6058 5946 372 305 97 58 chr17 331577 331931 -85106549 - L1ME4a LINE L1 -353 5768 5388 2474 67 0 0 chr17 331931 332228 -85106252 - AluY SINE Alu -14 297 1 372 305 97 58 chr17 332228 332358 -85106122 - L1ME4a LINE L1 -733 5388 5265 514 315 68 89 chr17 332366 332728 -85105752 - L1ME4a LINE L1 -896 5250 4901 1626 207 6 22 chr17 332728 332904 -85105576 - AluJb SINE Alu -3 309 139 2395 92 0 25 chr17 332904 333219 -85105261 - AluSq SINE Alu -6 307 1 1626 207 6 22 chr17 333219 333356 -85105124 - AluJb SINE Alu -173 139 1 514 315 68 89 chr17 333356 333510 -85104970 - L1ME4a LINE L1 -1245 4901 4745 837 261 77 26 chr17 333933 334244 -85104236 + L1MC4a LINE L1 5607 5933 -1875 335 307 51 7 chr17 335816 335953 -85102527 + L2 LINE L2 1596 1738 -1576 315 219 27 14 chr17 337685 337758 -85100722 + L2 LINE L2 3239 3312 -1 385 291 131 23 chr17 337774 337949 -85100531 + MIR SINE MIR 59 252 -10 21 0 0 0 chr17 338058 338079 -85100401 + AT_rich Low_complexity Low_complexity 1 21 0 2049 139 3 0 chr17 338089 338376 -85100104 - AluSx SINE Alu -24 288 1 2404 97 0 0 chr17 338378 338678 -85099802 - AluSx SINE Alu -10 302 3 1861 158 0 3 chr17 338683 338967 -85099513 - AluJb SINE Alu -17 295 13 1611 91 0 36 chr17 339023 339244 -85099236 - AluSg/x SINE Alu -16 294 82 2556 61 0 3 chr17 339250 339560 -85098920 + AluY SINE Alu 1 309 -2 1628 164 43 4 chr17 339653 339933 -85098547 + AluJo SINE Alu 1 291 -21 321 93 0 0 chr17 340055 340098 -85098382 + Alu SINE Alu 1 43 -258 1499 71 6 0 chr17 340098 340280 -85098200 + AluSg/x SINE Alu 125 307 -5 243 0 0 0 chr17 340280 340307 -85098173 + (TA)n Simple_repeat Simple_repeat 1 27 0 369 239 28 9 chr17 340308 340368 -85098112 + L1ME LINE L1 5708 5772 -349 2351 110 0 0 chr17 340368 340676 -85097804 + AluSx SINE Alu 1 308 -4 369 239 28 9 chr17 340676 340724 -85097756 + L1ME LINE L1 5772 5818 -303 885 142 155 7 chr17 340728 340883 -85097597 + FRAM SINE Alu 1 172 -4 1916 204 108 52 chr17 341563 341793 -85096687 - L1ME2 LINE L1 -63 6101 5885 2617 55 3 0 chr17 341793 342103 -85096377 - AluY SINE Alu 0 311 1 1916 204 108 52 chr17 342103 342504 -85095976 - L1ME2 LINE L1 -279 5885 5435 593 194 167 7 chr17 342510 342654 -85095826 - AluJo SINE Alu -109 203 37 571 150 37 1 chr17 342655 342782 -85095698 - L1M1 LINE L1 -734 5430 5299 247 207 0 0 chr17 342924 342982 -85095498 - L1ME2 LINE L1 -968 5178 5121 573 138 0 11 chr17 343123 343217 -85095263 + LTR23 LTR ERV1 313 405 -32 22 35 0 0 chr17 343224 343253 -85095227 + AT_rich Low_complexity Low_complexity 1 29 0 2269 112 0 40 chr17 343281 343604 -85094876 - AluSx SINE Alu -2 310 1 315 261 56 99 chr17 343605 343630 -85094850 - MIR SINE MIR -49 213 188 2598 33 0 23 chr17 343630 343935 -85094545 - AluY SINE Alu -13 298 1 315 261 56 99 chr17 343935 344070 -85094410 - MIR SINE MIR -74 188 60 2208 112 3 0 chr17 345026 345322 -85093158 + AluSq SINE Alu 1 297 -16 591 204 18 0 chr17 345909 346022 -85092458 - FLAM_A SINE Alu -18 115 1 21 36 0 0 chr17 346416 346444 -85092036 + AT_rich Low_complexity Low_complexity 1 28 0 2320 78 41 0 chr17 347882 348177 -85090303 - AluSp SINE Alu -2 311 5 2007 93 7 7 chr17 348635 348905 -85089575 - AluSp SINE Alu 0 313 44 23 0 0 0 chr17 349029 349052 -85089428 + AT_rich Low_complexity Low_complexity 1 23 0 2169 102 7 0 chr17 349052 349346 -85089134 + AluSp SINE Alu 1 296 -17 932 192 43 14 chr17 349469 349677 -85088803 - AluJb SINE Alu -13 299 86 598 197 87 44 chr17 350194 350332 -85088148 - MER4C LTR ERV1 0 465 316 3823 67 34 0 chr17 350332 350828 -85087652 + LTR10D LTR ERV1 1 513 0 598 197 87 44 chr17 350828 350872 -85087608 - MER4C LTR ERV1 -149 316 275 890 130 162 7 chr17 351465 351619 -85086861 + FRAM SINE Alu 1 172 -4 824 103 0 9 chr17 351644 351751 -85086729 - AluSg/x SINE Alu -129 183 78 1513 120 0 5 chr17 351751 351960 -85086520 - AluSx SINE Alu -100 212 5 1230 178 54 25 chr17 351979 352221 -85086259 - AluJo SINE Alu -25 287 39 2258 73 16 36 chr17 352271 352574 -85085906 - AluSg SINE Alu -13 297 1 569 15 0 0 chr17 352816 352904 -85085576 + AluY SINE Alu 217 304 0 2678 37 3 0 chr17 352914 353213 -85085267 + AluY SINE Alu 1 300 -11 1180 167 90 2 chr17 353213 353463 -85085017 - L1MD2 LINE L1 -429 5930 5657 824 207 7 0 chr17 353472 353617 -85084863 + AluSg/x SINE Alu 135 280 -32 192 152 0 0 chr17 353630 353663 -85084817 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 3100 84 40 2 chr17 353766 354219 -85084261 + LTR10D LTR ERV1 44 513 0 285 276 0 13 chr17 354272 354348 -85084132 - LTR59 LTR ERV1 -169 428 354 * 297 225 100 0 chr17 354327 354407 -85084073 - MER4C LTR ERV1 -201 264 177 335 200 100 0 chr17 354412 354492 -85083988 - MER4C LTR ERV1 -201 264 177 250 224 158 0 chr17 354497 354573 -85083907 - MER4C LTR ERV1 -201 264 177 335 200 100 0 chr17 354578 354658 -85083822 - MER4C LTR ERV1 -201 264 177 300 225 100 0 chr17 354663 354743 -85083737 - MER4C LTR ERV1 -201 264 177 321 213 100 0 chr17 354748 354828 -85083652 - MER4C LTR ERV1 -201 264 177 280 179 167 0 chr17 354833 354911 -85083569 - MER4C LTR ERV1 -201 264 174 * 654 152 54 121 chr17 354887 355232 -85083248 - MER4C LTR ERV1 -283 381 1 198 230 23 126 chr17 358435 358522 -85079958 + MIR SINE MIR 79 156 -106 488 291 105 0 chr17 358903 359075 -85079405 + MIR SINE MIR 59 248 -14 181 279 81 62 chr17 359897 360012 -85078468 - MIR SINE MIR -50 212 92 612 196 8 45 chr17 360012 360145 -85078335 - FLAM_A SINE Alu -5 128 1 181 279 81 62 chr17 360145 360190 -85078290 - MIR SINE MIR -170 92 49 274 309 204 25 chr17 361652 362015 -85076465 + L2 LINE L2 2046 2473 -841 519 178 11 0 chr17 366038 366128 -85072352 - FLAM_A SINE Alu -41 101 11 1731 143 66 21 chr17 366327 366614 -85071866 + AluJb SINE Alu 1 300 -12 783 134 15 22 chr17 366623 366757 -85071723 + FLAM_C SINE Alu 1 133 0 1760 124 0 0 chr17 370146 370388 -85068092 - AluSq SINE Alu -2 311 70 239 125 0 0 chr17 370388 370428 -85068052 - Alu SINE Alu -135 168 129 187 264 126 35 chr17 370452 370539 -85067941 + MIR SINE MIR 57 151 -111 824 100 0 50 chr17 370583 370723 -85067757 + FLAM_C SINE Alu 1 133 0 2109 98 35 41 chr17 370732 371047 -85067433 + AluSq SINE Alu 1 313 0 1881 153 21 0 chr17 371354 371642 -85066838 + AluJb SINE Alu 1 294 -18 2416 84 7 0 chr17 371825 372124 -85066356 + AluSx SINE Alu 1 301 -11 215 262 0 117 chr17 372459 372562 -85065918 - MIR SINE MIR -107 155 65 2494 87 0 10 chr17 372909 373220 -85065260 + AluSx SINE Alu 1 308 -4 2312 120 0 0 chr17 373267 373576 -85064904 + AluSg SINE Alu 1 309 -1 305 183 211 29 chr17 373914 374018 -85064462 - MER5A DNA MER1_type -3 186 64 2139 105 3 43 chr17 374214 374538 -85063942 - AluSx SINE Alu -1 311 1 2185 106 39 0 chr17 374909 375192 -85063288 + AluSx SINE Alu 1 294 -18 667 161 24 0 chr17 375239 375363 -85063117 + FLAM_C SINE Alu 1 127 -6 1531 174 68 20 chr17 375607 375900 -85062580 + AluJo SINE Alu 1 307 -5 879 144 0 0 chr17 375903 376035 -85062445 + FLAM_C SINE Alu 2 133 0 204 192 58 0 chr17 377583 377709 -85060771 + C-rich Low_complexity Low_complexity 1 133 0 186 174 0 0 chr17 377815 377861 -85060619 + G-rich Low_complexity Low_complexity 4 49 0 2117 87 4 0 chr17 378418 378712 -85059768 + AluSx SINE Alu 20 314 0 322 170 50 70 chr17 379006 379106 -85059374 + MIR3 SINE MIR 110 207 -1 2625 64 0 0 chr17 379842 380153 -85058327 + AluY SINE Alu 1 311 0 227 280 153 8 chr17 380414 380532 -85057948 + L2 LINE L2 3164 3298 -15 465 286 127 18 chr17 380549 380644 -85057836 - MIR SINE MIR -11 251 168 264 30 0 0 chr17 380644 380677 -85057803 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 286 127 18 chr17 380677 380801 -85057679 - MIR SINE MIR -94 168 8 350 264 19 38 chr17 380962 381068 -85057412 - MIR SINE MIR -46 216 113 1466 186 3 40 chr17 381690 381991 -85056489 + AluJb SINE Alu 3 292 -20 576 216 78 39 chr17 382168 382400 -85056080 + AluJo SINE Alu 5 245 -67 303 26 0 0 chr17 382400 382438 -85056042 + AluJ/FLAM SINE Alu 39 76 -226 494 235 70 50 chr17 382438 382638 -85055842 + AluJb SINE Alu 11 214 -98 461 103 0 0 chr17 382635 382703 -85055777 + AluJ/FLAM SINE Alu 11 78 -234 * 1753 146 38 0 chr17 382703 382964 -85055516 + AluJb SINE Alu 13 283 -29 441 0 0 0 chr17 382964 383013 -85055467 + (CA)n Simple_repeat Simple_repeat 2 50 0 312 283 128 11 chr17 383401 383581 -85054899 + MIR SINE MIR 21 221 -41 1334 200 35 24 chr17 384044 384334 -85054146 + AluJb SINE Alu 1 293 -19 608 152 9 0 chr17 384349 384454 -85054026 - FLAM_C SINE Alu -37 106 1 2330 57 0 4 chr17 384537 384817 -85053663 + AluY SINE Alu 31 309 -2 1641 164 43 4 chr17 384910 385190 -85053290 + AluJo SINE Alu 1 291 -21 237 146 49 0 chr17 385312 385353 -85053127 + Alu SINE Alu 1 43 -259 1170 119 12 0 chr17 385353 385513 -85052967 + AluSg/x SINE Alu 125 286 -26 732 131 0 0 chr17 385613 385720 -85052760 - AluSq/x SINE Alu -203 109 3 859 195 153 0 chr17 385730 385992 -85052488 - L1M4 LINE L1 -869 5277 4976 468 0 0 0 chr17 386176 386228 -85052252 + (TG)n Simple_repeat Simple_repeat 1 52 0 2318 39 11 18 chr17 386228 386508 -85051972 - AluY SINE Alu -33 278 1 190 89 67 22 chr17 386543 386588 -85051892 + CT-rich Low_complexity Low_complexity 4 50 0 2101 187 102 20 chr17 386848 387346 -85051134 + L1MB7 LINE L1 5627 6165 -19 1688 210 13 3 chr17 387443 387752 -85050728 + AluJo SINE Alu 1 312 0 7186 39 2 0 chr17 389176 390534 -85047946 - L1PA4 LINE L1 -1 6154 4795 25477 31 4 7 chr17 390534 393779 -85044701 + L1PA4 LINE L1 1575 4810 -1336 279 247 65 0 chr17 393792 393869 -85044611 - HsTC2 DNA Tc2 -546 1352 1271 677 258 117 11 chr17 393876 394159 -85044321 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 394397 394457 -85044023 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 395021 395046 -85043434 + AT_rich Low_complexity Low_complexity 1 25 0 742 212 0 91 chr17 395121 395148 -85043332 + L1MA10 LINE L1 6124 6152 -182 2129 118 3 7 chr17 395148 395459 -85043021 - AluSg SINE Alu 0 310 2 742 212 0 91 chr17 395459 395662 -85042818 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 395998 396039 -85042441 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1979 170 0 0 chr17 396133 396433 -85042047 + AluSx SINE Alu 1 300 -12 262 267 61 30 chr17 396627 396758 -85041722 + MIR SINE MIR 77 211 -51 1566 28 0 42 chr17 397586 397798 -85040682 + L1PA3 LINE L1 5953 6155 0 394 254 60 0 chr17 399399 399533 -85038947 + L1MD2 LINE L1 6206 6347 -12 757 168 32 32 chr17 399534 399724 -85038756 + HsTC2 DNA Tc2 1602 1791 -107 2035 103 3 88 chr17 400945 401265 -85037215 - AluSx SINE Alu -19 293 1 10409 31 14 154 chr17 401345 402949 -85035531 + SVA Other Other 7 1386 0 194 287 83 37 chr17 403601 403709 -85034771 - MIR SINE MIR -148 114 2 1917 172 7 0 chr17 404386 404689 -85033791 + AluJb SINE Alu 1 305 -7 1909 134 0 19 chr17 407052 407366 -85031114 - AluSx SINE Alu -4 308 1 1668 168 7 10 chr17 407366 407662 -85030818 - AluJb SINE Alu -17 295 1 25 51 0 0 chr17 407705 407744 -85030736 + AT_rich Low_complexity Low_complexity 1 39 0 350 171 66 0 chr17 407771 407847 -85030633 - L1MB8 LINE L1 -2 6176 6096 2657 181 18 30 chr17 407867 408436 -85030044 - L1MB4 LINE L1 -12 6168 5607 2103 94 23 3 chr17 409710 410009 -85028471 - AluSx SINE Alu -7 305 1 339 273 104 50 chr17 410499 410727 -85027753 - MIR SINE MIR -19 243 23 2414 68 0 0 chr17 412359 412670 -85025810 - AluY SINE Alu 0 311 1 226 228 140 0 chr17 412777 412834 -85025646 + L2 LINE L2 3207 3271 -1 374 159 29 14 chr17 413105 413174 -85025306 - MLT1K LTR MaLR -8 580 511 333 0 0 0 chr17 413288 413325 -85025155 + (GA)n Simple_repeat Simple_repeat 2 38 0 387 0 0 0 chr17 413348 413391 -85025089 + (TG)n Simple_repeat Simple_repeat 2 44 0 1887 100 59 0 chr17 413524 413794 -85024686 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 413935 414089 -85024391 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 414121 414221 -85024259 + CT-rich Low_complexity Low_complexity 2 102 0 1912 143 13 0 chr17 414244 414552 -85023928 - AluSx SINE Alu 0 312 1 2286 96 0 0 chr17 415586 415889 -85022591 - AluSc SINE Alu -6 303 1 1702 163 10 10 chr17 415892 416186 -85022294 - AluSx SINE Alu -14 298 5 253 188 125 0 chr17 417221 417285 -85021195 + MER94 DNA DNA 4 75 -59 2204 119 6 26 chr17 417431 417775 -85020705 - MER1B DNA MER1_type 0 337 1 249 260 185 17 chr17 418031 418204 -85020276 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 418206 418443 -85020037 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 418467 418571 -85019909 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 418571 418808 -85019672 - AluSg SINE Alu -19 291 56 2235 98 0 0 chr17 418813 419119 -85019361 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 419119 419479 -85019001 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 419483 419778 -85018702 - AluSq SINE Alu -17 296 1 1130 233 32 0 chr17 419778 420027 -85018453 - MSTD-int LTR MaLR -1477 258 2 1166 194 85 62 chr17 420027 420481 -85017999 - MSTD LTR MaLR -2 426 1 768 311 81 58 chr17 420548 421123 -85017357 + L2 LINE L2 2370 2981 -332 2293 78 0 0 chr17 421123 421417 -85017063 + AluY SINE Alu 1 294 -17 768 311 81 58 chr17 421417 421757 -85016723 + L2 LINE L2 2981 3312 -1 1763 148 18 0 chr17 422283 422567 -85015913 - AluJb SINE Alu -13 299 11 309 26 0 0 chr17 422576 422614 -85015866 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 42718 59 4 4 chr17 425072 430778 -85007702 - L1P2 LINE L1 -439 5715 11 313 285 40 99 chr17 430830 430981 -85007499 + MIR3 SINE MIR 56 197 -11 2287 88 0 3 chr17 431089 431395 -85007085 - AluSq SINE Alu -8 305 1 1625 156 0 8 chr17 431734 431990 -85006490 - AluJb SINE Alu -54 258 5 1650 182 7 0 chr17 434385 434682 -85003798 - AluJb SINE Alu -13 299 1 292 194 0 0 chr17 434948 435010 -85003470 + L1MA3 LINE L1 5104 5165 -981 519 118 24 0 chr17 435064 435149 -85003331 - L1M LINE L1 -784 5396 5310 2093 181 37 18 chr17 436534 436988 -85001492 + L1MA3 LINE L1 5838 6300 -5 1269 172 38 34 chr17 437104 437395 -85001085 - AluJo SINE Alu -20 292 1 189 94 0 0 chr17 439037 439069 -84999411 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2069 90 11 0 chr17 439072 439350 -84999130 - AluSp SINE Alu -32 281 1 279 0 0 0 chr17 439515 439546 -84998934 + (TG)n Simple_repeat Simple_repeat 1 31 0 2202 92 0 19 chr17 439563 439880 -84998600 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 441557 441579 -84996901 + (TG)n Simple_repeat Simple_repeat 1 22 0 2007 90 14 4 chr17 441579 441858 -84996622 - AluSq SINE Alu -31 282 1 183 216 0 0 chr17 442587 442624 -84995856 + L2 LINE L2 3232 3268 -4 1654 166 7 24 chr17 442670 442966 -84995514 - AluSx SINE Alu -21 291 1 1347 143 4 30 chr17 443131 443361 -84995119 - AluJo SINE Alu -16 296 73 1151 211 12 37 chr17 443616 443858 -84994622 - L1MC1 LINE L1 0 6333 6098 946 168 0 6 chr17 443862 444023 -84994457 - FAM SINE Alu -10 175 16 1793 170 10 3 chr17 444065 444371 -84994109 + AluJb SINE Alu 1 308 -4 273 151 0 0 chr17 444379 444432 -84994048 + GA-rich Low_complexity Low_complexity 4 56 0 2123 113 0 10 chr17 445375 445685 -84992795 + AluSx SINE Alu 1 307 -5 456 282 33 74 chr17 446303 446693 -84991787 + L1MEd LINE L1 895 1317 -1173 1807 159 0 7 chr17 446709 447010 -84991470 + AluJo SINE Alu 1 299 -13 344 268 212 45 chr17 447014 447375 -84991105 + L1ME LINE L1 5394 5822 -348 1132 180 0 9 chr17 447876 448087 -84990393 + AluJo SINE Alu 74 282 -30 2095 97 28 0 chr17 448502 448791 -84989689 - AluSx SINE Alu -15 297 1 1871 197 217 12 chr17 448791 449284 -84989196 + MLT1G1 LTR MaLR 2 595 0 245 116 23 0 chr17 450370 450413 -84988067 + Alu SINE Alu 1 44 -258 1933 119 0 0 chr17 450413 450707 -84987773 + AluY SINE Alu 5 298 -13 2463 48 3 0 chr17 450952 451262 -84987218 + AluY SINE Alu 1 311 0 225 0 0 0 chr17 453210 453235 -84985245 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr17 455551 455574 -84982906 + AT_rich Low_complexity Low_complexity 1 23 0 1940 110 11 0 chr17 455727 456036 -84982444 - AluSx SINE Alu 0 312 1 675 227 28 90 chr17 456570 456820 -84981660 + MIR SINE MIR 23 248 -14 410 257 114 0 chr17 457213 457318 -84981162 - MIR SINE MIR -36 226 110 2306 70 0 7 chr17 457695 457995 -84980485 + AluSc SINE Alu 1 298 -11 216 0 0 0 chr17 458002 458026 -84980454 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2106 91 0 0 chr17 458865 459141 -84979339 + AluY SINE Alu 1 276 -35 186 43 0 0 chr17 459141 459164 -84979316 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 934 129 24 0 chr17 459165 459335 -84979145 + GA-rich Low_complexity Low_complexity 4 177 0 306 0 0 0 chr17 459337 459371 -84979109 + (CAGG)n Simple_repeat Simple_repeat 2 35 0 1749 151 18 0 chr17 459380 459664 -84978816 + AluJb SINE Alu 11 299 -13 789 311 82 58 chr17 460190 460529 -84977951 - L2 LINE L2 -1 3312 2983 2306 75 0 0 chr17 460529 460823 -84977657 - AluY SINE Alu -17 294 1 789 311 82 58 chr17 460823 461398 -84977082 - L2 LINE L2 -330 2983 2370 1166 191 82 59 chr17 461465 461919 -84976561 + MSTD LTR MaLR 1 426 -2 1157 225 32 0 chr17 461919 462168 -84976312 + MSTD-int LTR MaLR 2 258 -1477 2152 98 3 0 chr17 462168 462463 -84976017 + AluSq SINE Alu 1 296 -17 1068 282 72 32 chr17 462467 462827 -84975653 - L2 LINE L2 -986 2328 1984 2182 108 0 0 chr17 462827 463133 -84975347 + AluSq SINE Alu 1 306 -7 1719 110 0 4 chr17 463138 463375 -84975105 + AluSg SINE Alu 56 291 -19 1068 282 72 32 chr17 463375 463479 -84975001 - L2 LINE L2 -1333 1981 1839 867 198 8 118 chr17 463503 463740 -84974740 + MER58A DNA MER1_type 11 221 -3 243 259 184 23 chr17 463742 463916 -84974564 - L2 LINE L2 -1516 1798 1597 2215 116 6 26 chr17 464171 464515 -84973965 + MER1B DNA MER1_type 1 337 0 253 188 125 0 chr17 464661 464725 -84973755 - MER94 DNA DNA -59 75 4 1771 157 10 10 chr17 465760 466059 -84972421 + AluSx SINE Alu 5 303 -9 2286 96 0 0 chr17 466062 466365 -84972115 + AluSc SINE Alu 1 303 -6 1833 147 16 0 chr17 467384 467690 -84970790 + AluSx SINE Alu 1 311 -1 345 130 40 30 chr17 467719 467819 -84970661 + GA-rich Low_complexity Low_complexity 2 102 0 305 305 104 19 chr17 467851 468005 -84970475 + MIR SINE MIR 17 183 -79 1872 104 59 0 chr17 468146 468416 -84970064 - AluSc SINE Alu -13 296 11 423 0 0 0 chr17 468549 468596 -84969884 + (CA)n Simple_repeat Simple_repeat 2 48 0 405 0 0 0 chr17 468619 468664 -84969816 + (TC)n Simple_repeat Simple_repeat 2 46 0 2189 92 0 3 chr17 469049 469355 -84969125 + AluSc SINE Alu 1 305 -4 1180 62 0 7 chr17 469682 469828 -84968652 + AluSq/x SINE Alu 1 145 -168 2188 110 0 0 chr17 469828 470129 -84968351 + AluSx SINE Alu 1 301 -11 233 270 120 41 chr17 470142 470409 -84968071 + L1M4 LINE L1 3657 3944 -2202 418 281 35 9 chr17 470497 470611 -84967869 + L2 LINE L2 3197 3313 0 1645 181 35 84 chr17 470693 470934 -84967546 - Charlie1 DNA MER1_type -1 2760 2509 188 35 35 0 chr17 470934 470963 -84967517 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1986 120 0 0 chr17 470967 471251 -84967229 - AluSg SINE Alu -26 284 1 1645 181 35 84 chr17 471251 471458 -84967022 - Charlie1 DNA MER1_type -255 2506 2329 1474 219 40 26 chr17 471461 471808 -84966672 - MLT1A1 LTR MaLR -2 363 12 712 167 7 211 chr17 471811 472105 -84966375 - Charlie1 DNA MER1_type -341 2420 2187 1023 261 71 25 chr17 472105 472499 -84965981 + L1MCc LINE L1 17 428 -5995 * 1106 226 46 77 chr17 472497 473127 -84965353 + L1MCc LINE L1 1278 1909 -4887 749 251 44 36 chr17 473122 473397 -84965083 + L1MCc LINE L1 2232 2508 -4614 * 285 294 46 0 chr17 473392 473501 -84964979 + L1MA9 LINE L1 6161 6274 -38 * 776 181 0 8 chr17 473533 473666 -84964814 + FLAM_A SINE Alu 1 132 -1 33 0 0 0 chr17 473691 473724 -84964756 + AT_rich Low_complexity Low_complexity 1 33 0 333 255 59 93 chr17 473732 473936 -84964544 + L1MCc LINE L1 2597 2793 -4329 275 102 61 0 chr17 473946 473995 -84964485 + L1MCc LINE L1 2920 2971 -4151 1583 240 108 14 chr17 473996 474496 -84963984 + L1M4 LINE L1 4074 4620 -1526 2082 106 3 7 chr17 474521 474824 -84963656 + AluSq SINE Alu 1 302 -11 1952 164 11 35 chr17 475142 475514 -84962966 + MER47A DNA MER2_type 4 366 0 1268 191 29 51 chr17 475537 475851 -84962629 + AluJo SINE Alu 4 310 -2 1652 191 7 10 chr17 475853 476157 -84962323 + AluJo SINE Alu 1 303 -9 1662 162 13 26 chr17 476681 476819 -84961661 + AluJo SINE Alu 1 139 -173 2074 109 0 3 chr17 476819 477112 -84961368 + AluSx SINE Alu 1 292 -20 2064 105 3 3 chr17 477112 477407 -84961073 + AluSc SINE Alu 1 296 -13 1662 162 13 26 chr17 477407 477570 -84960910 + AluJo SINE Alu 137 299 -13 406 207 256 0 chr17 477592 477713 -84960767 - MIR SINE MIR -62 200 49 2014 124 101 20 chr17 477957 478304 -84960176 + THE1C LTR MaLR 1 375 0 741 223 66 18 chr17 479124 479280 -84959200 - AluJo SINE Alu -12 300 134 2139 126 0 0 chr17 479280 479589 -84958891 - AluSx SINE Alu -3 309 1 189 320 90 58 chr17 479647 479803 -84958677 - MIR SINE MIR -20 242 82 527 316 163 14 chr17 479868 480150 -84958330 + L3 LINE CR1 590 913 -664 806 291 84 7 chr17 480156 480441 -84958039 + MER102b DNA MER1_type 35 341 0 405 252 72 9 chr17 480441 480552 -84957928 + L3 LINE CR1 907 1024 -553 1412 258 112 38 chr17 480801 481308 -84957172 + L3 LINE CR1 1010 1554 -23 1460 198 12 1 chr17 481327 481816 -84956664 + MER44D DNA MER2_type 1 604 -1 1095 53 0 0 chr17 482536 482668 -84955812 + AluSg SINE Alu 1 132 -178 2112 113 7 0 chr17 482669 482971 -84955509 + AluSg SINE Alu 1 304 -6 1461 145 4 0 chr17 483028 483255 -84955225 + MER44D DNA MER2_type 322 604 -1 1342 172 29 44 chr17 483266 483539 -84954941 + AluJo SINE Alu 12 280 -32 376 241 0 0 chr17 484585 484668 -84953812 - AluJo SINE Alu -3 299 217 827 160 7 7 chr17 484671 484821 -84953659 - AluJo SINE Alu -162 150 1 318 244 61 0 chr17 485023 485105 -84953375 + MIR3 SINE MIR 114 200 -8 214 356 53 53 chr17 485127 485335 -84953145 - L2 LINE L2 -220 3052 2845 1790 148 3 10 chr17 485370 485668 -84952812 - AluJb SINE Alu -16 296 1 1000 128 12 6 chr17 486608 486772 -84951708 - AluSg/x SINE Alu -9 301 137 1897 149 0 0 chr17 487980 488268 -84950212 + AluSx SINE Alu 13 300 -12 1603 166 7 0 chr17 488279 488550 -84949930 + AluJo SINE Alu 40 312 0 1838 137 10 3 chr17 488703 489009 -84949471 + AluSx SINE Alu 1 308 -4 918 227 21 5 chr17 489368 489562 -84948918 + MER58A DNA MER1_type 28 224 0 1171 233 129 20 chr17 489571 489919 -84948561 + L1ME3A LINE L1 5775 6160 -10 21 0 0 0 chr17 489924 489945 -84948535 + AT_rich Low_complexity Low_complexity 1 21 0 2066 100 0 27 chr17 490078 490378 -84948102 + AluSq SINE Alu 1 292 -21 2099 95 7 14 chr17 490859 491155 -84947325 + AluSg SINE Alu 1 294 -16 649 258 27 5 chr17 491258 491444 -84947036 + AluJo SINE Alu 120 309 -3 2177 93 6 13 chr17 491452 491763 -84946717 + AluSg SINE Alu 1 309 -1 1608 183 0 10 chr17 491992 492287 -84946193 + AluSx SINE Alu 1 292 -20 812 134 0 0 chr17 492869 492988 -84945492 - AluJb SINE Alu -12 300 182 332 73 0 0 chr17 492988 493029 -84945451 - Alu SINE Alu -245 63 23 1508 157 0 88 chr17 494375 494523 -84943957 + AluJo SINE Alu 1 108 -204 1905 122 0 17 chr17 494523 494811 -84943669 + AluSc SINE Alu 1 283 -26 1508 157 0 88 chr17 494811 494981 -84943499 + AluJo SINE Alu 108 291 -21 22 0 0 0 chr17 495293 495315 -84943165 + AT_rich Low_complexity Low_complexity 1 22 0 2233 101 0 0 chr17 495325 495622 -84942858 + AluSc SINE Alu 1 297 -12 223 259 52 0 chr17 495691 495749 -84942731 + L2 LINE L2 3151 3211 -61 266 290 154 43 chr17 495806 496085 -84942395 + L2 LINE L2 2448 2757 -557 245 310 9 35 chr17 496095 496211 -84942269 + Charlie7 DNA MER1_type 1 113 -2499 2310 85 7 0 chr17 496308 496613 -84941867 + AluSq SINE Alu 1 307 -6 1614 182 23 10 chr17 496635 496943 -84941537 + AluJo SINE Alu 1 312 0 4483 155 78 35 chr17 497124 498038 -84940442 - LTR13 LTR ERVK 0 954 2 362 323 0 23 chr17 498071 498201 -84940279 + L2 LINE L2 2942 3068 -245 317 284 44 77 chr17 498327 498510 -84939970 + L2 LINE L2 3137 3313 0 382 265 38 30 chr17 498632 498764 -84939716 + L2 LINE L2 3140 3272 0 2068 120 7 0 chr17 498933 499241 -84939239 + AluSq SINE Alu 1 310 -3 251 159 48 0 chr17 499702 499765 -84938715 + L1MA8 LINE L1 6225 6290 -1 1644 100 151 12 chr17 499766 500017 -84938463 + AluSx SINE Alu 1 286 -16 198 0 0 0 chr17 500020 500042 -84938438 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1298 158 22 13 chr17 500055 500283 -84938197 + AluJb SINE Alu 58 287 -25 2187 101 0 0 chr17 500886 501184 -84937296 - AluY SINE Alu -13 298 1 2119 106 3 3 chr17 501246 501547 -84936933 - AluSg SINE Alu -9 301 1 481 146 0 0 chr17 501790 501872 -84936608 + L1PB3 LINE L1 6073 6154 0 1021 99 0 7 chr17 502140 502281 -84936199 + FRAM SINE Alu 18 157 -19 2233 97 3 0 chr17 502439 502749 -84935731 + AluSx SINE Alu 1 311 -1 2183 81 0 16 chr17 502826 503133 -84935347 + AluSx SINE Alu 1 302 -10 2445 49 7 0 chr17 504420 504724 -84933756 - AluSg SINE Alu -4 306 1 191 387 0 40 chr17 504780 504855 -84933625 + MIR SINE MIR 33 104 -158 22 70 0 0 chr17 505159 505202 -84933278 + AT_rich Low_complexity Low_complexity 1 43 0 327 154 35 71 chr17 505256 505343 -84933137 + AluYb8 SINE Alu 120 195 -113 664 72 0 52 chr17 505394 505491 -84932989 + FRAM SINE Alu 55 146 -30 327 234 109 70 chr17 505502 505630 -84932850 + L1ME4a LINE L1 5794 5926 -195 254 236 69 0 chr17 505828 505900 -84932580 - L1ME1 LINE L1 -8 6158 6082 1515 136 140 15 chr17 505903 506168 -84932312 + AluSx SINE Alu 1 298 -4 1129 184 0 10 chr17 506309 506516 -84931964 - AluJo SINE Alu -107 205 1 456 282 33 74 chr17 506532 506922 -84931558 - L1MEd LINE L1 -1173 1317 895 2163 125 0 13 chr17 508318 508629 -84929851 - AluSx SINE Alu -5 307 1 336 350 29 22 chr17 509440 509577 -84928903 - L2 LINE L2 -1 3271 3134 918 223 23 11 chr17 512327 512592 -84925888 + L1M4 LINE L1 4986 5253 -893 482 88 0 0 chr17 612830 612898 -84825582 - Alu SINE Alu -232 78 11 1876 124 9 73 chr17 612901 613216 -84825264 - AluSx SINE Alu -17 295 1 2062 66 0 0 chr17 613456 613698 -84824782 + AluSq SINE Alu 1 242 -71 812 158 0 0 chr17 614669 614789 -84823691 + AluJo SINE Alu 1 120 -192 1037 161 0 22 chr17 614790 614970 -84823510 - FRAM SINE Alu 0 176 1 21 36 0 0 chr17 614983 615011 -84823469 + AT_rich Low_complexity Low_complexity 1 28 0 935 124 0 28 chr17 615033 615178 -84823302 - FLAM_C SINE Alu -2 141 1 255 167 0 50 chr17 615196 615256 -84823224 + AluJo SINE Alu 130 186 -116 721 185 52 0 chr17 615281 615416 -84823064 + FRAM SINE Alu 10 151 -25 2240 113 0 28 chr17 615717 616035 -84822445 - AluSq SINE Alu 0 313 5 1071 83 0 0 chr17 617501 617634 -84820846 + AluSq/x SINE Alu 1 133 -179 1804 167 17 0 chr17 617636 617936 -84820544 + AluJb SINE Alu 1 305 -7 210 118 0 0 chr17 617936 617970 -84820510 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 189 132 38 19 chr17 617963 618016 -84820464 + GA-rich Low_complexity Low_complexity 1 54 0 * 2134 118 17 0 chr17 618174 618463 -84820017 - AluSq SINE Alu -19 294 1 180 0 0 0 chr17 618472 618492 -84819988 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2069 128 3 0 chr17 618492 618774 -84819706 - AluSx SINE Alu -29 283 1 2461 82 0 0 chr17 619926 620229 -84818251 - AluY SINE Alu -8 303 1 1928 139 35 3 chr17 620268 620555 -84817925 - AluJb SINE Alu -16 296 1 1279 226 35 41 chr17 620716 621083 -84817397 - MLT1A1 LTR MaLR 0 365 1 2294 86 3 13 chr17 621102 621404 -84817076 + AluSx SINE Alu 1 299 -13 281 297 0 0 chr17 621492 621556 -84816924 - MER2 DNA MER2_type 0 345 282 * 365 225 85 70 chr17 621531 621660 -84816820 - MER8 DNA MER2_type -60 179 49 1050 130 62 0 chr17 621799 621961 -84816519 - AluSg/x SINE Alu -7 305 134 2203 107 3 7 chr17 621961 622260 -84816220 - AluSg SINE Alu -12 298 1 844 136 0 0 chr17 622910 623083 -84815397 + FLAM_C SINE Alu 2 174 0 1059 109 24 6 chr17 623662 623827 -84814653 - Tigger5 DNA MER2_type 0 2323 2156 180 267 50 0 chr17 624474 624534 -84813946 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 624994 625054 -84813426 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625189 625249 -84813231 - L2 LINE L2 -1406 1908 1846 183 267 50 0 chr17 625319 625379 -84813101 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625514 625574 -84812906 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625644 625704 -84812776 - L2 LINE L2 -1406 1908 1846 193 250 50 0 chr17 625774 625834 -84812646 - L2 LINE L2 -1406 1908 1846 183 267 50 0 chr17 625969 626029 -84812451 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 626164 626224 -84812256 - L2 LINE L2 -1406 1908 1846 193 250 50 0 chr17 626424 626484 -84811996 - L2 LINE L2 -1406 1908 1846 1192 179 0 9 chr17 627468 627686 -84810794 + MER46A DNA MER2_type 21 236 0 237 254 15 0 chr17 629963 630030 -84808450 + MIR SINE MIR 54 121 -141 209 193 0 18 chr17 631190 631247 -84807233 + GA-rich Low_complexity Low_complexity 2 57 0 23 0 0 0 chr17 632863 632886 -84805594 + AT_rich Low_complexity Low_complexity 1 23 0 2184 114 10 0 chr17 634677 634974 -84803506 - AluSx SINE Alu -12 300 1 823 147 0 16 chr17 634974 635103 -84803377 - AluJo/FLAM SINE Alu -185 127 1 2060 97 10 33 chr17 635248 635547 -84802933 - AluSx SINE Alu -20 292 1 329 287 66 12 chr17 635708 635813 -84802667 + MER5B DNA MER1_type 1 120 -58 2148 103 14 3 chr17 635813 636105 -84802375 - AluSc SINE Alu -14 295 1 329 287 66 12 chr17 636105 636166 -84802314 + MER5B DNA MER1_type 120 176 -2 2167 111 0 3 chr17 636976 637264 -84801216 - AluSx SINE Alu -25 287 1 1281 168 48 0 chr17 637304 637513 -84800967 - AluJo SINE Alu -92 220 2 1388 70 12 0 chr17 638066 638237 -84800243 + AluSg/x SINE Alu 135 307 -3 207 273 0 57 chr17 638914 639002 -84799478 + GA-rich Low_complexity Low_complexity 1 83 0 228 344 27 0 chr17 639621 639741 -84798739 - MER5A DNA MER1_type -5 173 47 276 257 122 68 chr17 641259 641415 -84797065 - L1ME4a LINE L1 -3 6118 5943 1850 156 0 14 chr17 641415 641710 -84796770 + AluJb SINE Alu 1 291 -21 276 257 122 68 chr17 641710 641790 -84796690 - L1ME4a LINE L1 -178 5943 5869 267 188 0 0 chr17 641855 641903 -84796577 + FAM SINE Alu 120 167 -12 309 336 73 0 chr17 642008 642118 -84796362 - L1ME4a LINE L1 -611 5510 5393 215 296 56 28 chr17 642264 642372 -84796108 - MIR SINE MIR -61 201 91 2048 81 102 18 chr17 643464 643748 -84794732 + AluSx SINE Alu 5 312 0 607 275 40 108 chr17 643939 644785 -84793695 + L1ME2 LINE L1 5268 5951 -213 1819 186 0 16 chr17 644850 645157 -84793323 + AluJo SINE Alu 1 302 -10 2297 118 3 0 chr17 645159 645464 -84793016 + AluSx SINE Alu 1 306 -6 252 349 84 19 chr17 646496 646711 -84791769 - L1ME3 LINE L1 -6 6156 5928 1046 208 42 17 chr17 646826 647062 -84791418 - L1ME3 LINE L1 -449 5713 5472 1891 163 11 3 chr17 647072 647355 -84791125 - AluJo SINE Alu -27 285 1 1894 237 43 124 chr17 647371 647537 -84790943 - L1ME3 LINE L1 -1002 5144 4966 3583 139 42 6 chr17 647537 648026 -84790454 - L1MB7 LINE L1 -19 6165 5646 2292 114 3 13 chr17 648026 648341 -84790139 - AluSx SINE Alu 0 312 1 3583 139 42 6 chr17 648341 648490 -84789990 - L1MB7 LINE L1 -538 5646 5504 1894 237 43 124 chr17 648490 648828 -84789652 - L1ME3 LINE L1 -1180 4966 4602 318 26 0 0 chr17 648828 648867 -84789613 + (CA)n Simple_repeat Simple_repeat 1 39 0 1894 237 43 124 chr17 648867 648983 -84789497 - L1ME3 LINE L1 -1544 4602 4478 244 191 0 0 chr17 648983 649025 -84789455 - MER57A LTR ERV1 -67 336 295 1894 237 43 124 chr17 649025 649204 -84789276 - L1ME3 LINE L1 -1668 4478 4286 1243 152 108 50 chr17 649204 649481 -84788999 + AluJo SINE Alu 1 293 -19 1894 237 43 124 chr17 649481 649578 -84788902 - L1ME3 LINE L1 -1860 4286 4183 2149 101 13 44 chr17 649578 649896 -84788584 - AluSg SINE Alu -2 308 1 1894 237 43 124 chr17 649896 650143 -84788337 - L1ME3 LINE L1 -1963 4183 4052 1184 194 53 30 chr17 650949 651212 -84787268 - AluJb SINE Alu -17 295 27 * 1274 102 17 11 chr17 651210 651386 -84787094 - AluSg/x SINE Alu -2 310 134 2485 72 13 3 chr17 651386 651691 -84786789 - AluSq SINE Alu -5 308 1 1986 117 53 17 chr17 651702 652002 -84786478 - AluSx SINE Alu -1 311 1 244 283 168 0 chr17 652010 652123 -84786357 + L2 LINE L2 3182 3313 0 872 189 44 0 chr17 652693 652852 -84785628 - AluJo SINE Alu -146 166 1 198 387 108 35 chr17 652856 653280 -84785200 + L2 LINE L2 2814 3268 -4 2330 105 0 0 chr17 653287 653583 -84784897 - AluSx SINE Alu -16 296 1 1978 167 0 0 chr17 654079 654378 -84784102 + AluJo SINE Alu 1 299 -13 1140 199 83 15 chr17 656167 656433 -84782047 + L1MC1 LINE L1 6049 6332 -1 354 258 164 25 chr17 657118 657277 -84781203 + L1MC5 LINE L1 7744 7924 -37 305 240 221 0 chr17 658088 658192 -84780288 - MIR3 SINE MIR -4 204 78 690 162 0 0 chr17 659006 659117 -84779363 + AluJb SINE Alu 147 257 -55 223 328 74 33 chr17 659236 659358 -84779122 - MIR SINE MIR -59 203 77 1894 138 12 66 chr17 659629 659948 -84778532 - AluJo SINE Alu -10 302 1 230 244 0 0 chr17 660849 660894 -84777586 - L2 LINE L2 -7 3306 3262 195 289 0 0 chr17 661360 661405 -84777075 - L2 LINE L2 -7 3306 3262 191 250 0 0 chr17 661409 661445 -84777035 - L2 LINE L2 -16 3297 3262 238 290 67 104 chr17 661562 661755 -84776725 - MIR SINE MIR -10 252 67 516 303 97 21 chr17 661765 662003 -84776477 + MIR SINE MIR 7 262 0 1957 114 10 3 chr17 662139 662437 -84776043 + AluSx SINE Alu 1 300 -12 209 333 33 0 chr17 663153 663213 -84775267 + MIR SINE MIR 37 98 -110 307 77 0 0 chr17 663219 663258 -84775222 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 875 91 0 57 chr17 663258 663502 -84774978 + (GGGA)n Simple_repeat Simple_repeat 1 230 0 312 165 0 26 chr17 663789 663854 -84774626 + Alu SINE Alu 1 53 -250 227 240 0 0 chr17 663864 663914 -84774566 + MIR SINE MIR 91 140 -122 491 198 0 0 chr17 663968 664049 -84774431 - AluJb SINE Alu -64 248 168 357 275 181 7 chr17 664053 664202 -84774278 + MIR SINE MIR 87 261 -1 1639 169 0 4 chr17 664241 664513 -84773967 + AluJo SINE Alu 1 271 -41 180 336 126 17 chr17 665135 665254 -84773226 - L2 LINE L2 -43 3229 3098 4120 191 65 37 chr17 665320 665773 -84772707 + L1MB7 LINE L1 4660 5099 -1085 423 0 0 0 chr17 665773 665820 -84772660 + (CA)n Simple_repeat Simple_repeat 1 47 0 4120 191 65 37 chr17 665820 666314 -84772166 + L1MB7 LINE L1 5099 5578 -606 2308 85 0 7 chr17 666314 666620 -84771860 - AluSx SINE Alu -8 304 1 4120 191 65 37 chr17 666620 667082 -84771398 + L1MB7 LINE L1 5578 6116 -68 1467 170 83 4 chr17 667082 667359 -84771121 - AluSx SINE Alu -13 299 1 4120 191 65 37 chr17 667359 667409 -84771071 + L1MB7 LINE L1 6116 6163 -21 199 336 65 42 chr17 667427 667644 -84770836 - L2 LINE L2 -244 3028 2807 341 292 119 40 chr17 669498 669724 -84768756 - MIR SINE MIR -6 256 13 1168 192 18 39 chr17 669800 670029 -84768451 - MER58A DNA MER1_type 0 224 1 1565 187 3 3 chr17 670728 671028 -84767452 + AluJo SINE Alu 1 300 -12 479 222 296 15 chr17 672966 673018 -84765462 - MIR SINE MIR 0 262 226 2129 98 24 0 chr17 673018 673313 -84765167 - AluSq SINE Alu -11 302 1 479 222 296 15 chr17 673313 673463 -84765017 - MIR SINE MIR -36 226 3 362 282 32 16 chr17 673603 673727 -84764753 - L2 LINE L2 -15 3298 3173 1942 100 3 65 chr17 673855 674164 -84764316 - AluSq SINE Alu -21 292 3 332 248 149 12 chr17 674199 674360 -84764120 + L1ME4a LINE L1 5533 5715 -406 308 273 45 18 chr17 674365 674475 -84764005 - L2 LINE L2 0 3313 3201 500 290 98 59 chr17 674500 674755 -84763725 + L2 LINE L2 2702 2966 -348 341 49 0 0 chr17 674841 674882 -84763598 - AluSg SINE Alu -201 99 59 1393 82 0 16 chr17 674884 675078 -84763402 - AluSx SINE Alu -121 191 1 951 222 40 48 chr17 675078 675429 -84763051 + L1MC5 LINE L1 7161 7508 -453 1373 159 41 44 chr17 675440 675735 -84762745 + AluJo SINE Alu 1 294 -18 659 152 67 42 chr17 675779 675944 -84762536 + L1MC3 LINE L1 7617 7785 0 631 174 144 0 chr17 675974 676106 -84762374 + MSTD LTR MaLR 3 153 -243 512 275 69 72 chr17 676108 676413 -84762067 - L2 LINE L2 -1 3312 3009 1088 94 0 13 chr17 676443 676592 -84761888 - AluSq/x SINE Alu -161 151 5 960 223 83 55 chr17 676597 676924 -84761556 - MLT1C LTR MaLR -126 341 6 885 208 35 10 chr17 676933 677135 -84761345 - L1MC5 LINE L1 -1095 6866 6660 1951 158 0 0 chr17 677299 677603 -84760877 - AluJo SINE Alu -8 304 1 1364 92 0 0 chr17 677629 677802 -84760678 + AluY SINE Alu 1 173 -138 2037 103 0 3 chr17 677802 678092 -84760388 + AluY SINE Alu 8 296 -15 1853 119 0 41 chr17 678147 678462 -84760018 + AluSg SINE Alu 1 303 0 242 267 44 0 chr17 678643 678733 -84759747 + L1ME4a LINE L1 5955 6048 -73 399 302 114 0 chr17 680729 680878 -84757602 + LTR33 LTR ERVL 356 521 0 357 298 66 50 chr17 680878 681059 -84757421 + L1ME4a LINE L1 5846 6029 -92 1641 128 0 8 chr17 681064 681337 -84757143 - AluSx SINE Alu 0 309 39 205 227 303 0 chr17 682508 682574 -84755906 - MIR SINE MIR -73 135 50 694 309 35 43 chr17 682647 682726 -84755754 - MIR SINE MIR -1 261 183 2089 111 6 16 chr17 682726 683041 -84755439 - AluSx SINE Alu 0 312 1 694 309 35 43 chr17 683041 683217 -84755263 - MIR SINE MIR -79 183 8 1112 82 0 0 chr17 683411 683557 -84754923 + AluSq/x SINE Alu 1 146 -166 1887 104 3 68 chr17 683557 683702 -84754778 + AluSx SINE Alu 1 115 -197 2178 89 13 13 chr17 683702 684005 -84754475 + AluY SINE Alu 1 303 -8 1887 104 3 68 chr17 684005 684185 -84754295 + AluSx SINE Alu 115 305 -7 2285 96 0 3 chr17 684563 684877 -84753603 + AluSp SINE Alu 1 313 0 2714 10 0 3 chr17 685365 685674 -84752806 + AluYa5 SINE Alu 1 308 -3 393 264 42 35 chr17 685682 685826 -84752654 - MER117 DNA MER1_type -34 163 19 2113 98 3 19 chr17 686173 686488 -84751992 - AluSg SINE Alu 0 310 1 1103 151 0 0 chr17 686944 687110 -84751370 - AluJb SINE Alu -12 300 135 1104 194 0 9 chr17 687114 687330 -84751150 + AluJo SINE Alu 67 280 -32 267 31 0 0 chr17 687332 687364 -84751116 + (GGGGA)n Simple_repeat Simple_repeat 5 36 0 1728 157 33 17 chr17 687690 687990 -84750490 - AluJb SINE Alu -7 305 1 2693 166 80 219 chr17 688144 689080 -84749400 + L1MC4 LINE L1 6461 7526 -516 1935 114 59 7 chr17 689080 689370 -84749110 + AluSx SINE Alu 1 305 -7 2693 166 80 219 chr17 689370 689528 -84748952 + L1MC4 LINE L1 7526 7275 -767 2116 108 3 19 chr17 689528 689842 -84748638 + AluSq SINE Alu 1 309 -4 2693 166 80 219 chr17 689842 690312 -84748168 + L1MC4 LINE L1 7274 7808 -234 753 165 49 18 chr17 690311 690475 -84748005 + L1MC4 LINE L1 7732 7900 -142 * 1133 160 37 0 chr17 690480 690668 -84747812 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 690668 690711 -84747769 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 221 190 52 0 chr17 690711 690769 -84747711 + A-rich Low_complexity Low_complexity 5 65 0 467 203 0 3 chr17 690807 690902 -84747578 + L1MC4 LINE L1 7889 8040 -2 321 26 0 0 chr17 690912 690950 -84747530 + (TCTCCC)n Simple_repeat Simple_repeat 6 43 0 10368 29 8 106 chr17 690954 692486 -84745994 + SVA Other Other 2 1383 -3 200 241 148 111 chr17 693033 693249 -84745231 - MIR SINE MIR -37 225 2 1757 172 7 0 chr17 693926 694229 -84744251 + AluJb SINE Alu 1 305 -7 1491 172 39 26 chr17 703961 704269 -84734211 - AluJb SINE Alu 0 312 1 2576 183 170 58 chr17 704275 704818 -84733662 + L1MC4a LINE L1 6940 7578 -230 1470 169 55 0 chr17 704818 705091 -84733389 + AluJo SINE Alu 1 288 -24 2576 183 170 58 chr17 705091 705350 -84733130 + L1MC4a LINE L1 7578 7807 -1 286 267 61 30 chr17 706181 706312 -84732168 - MIR SINE MIR -51 211 77 1864 163 0 0 chr17 706506 706806 -84731674 - AluSx SINE Alu -12 300 1 227 195 0 0 chr17 706900 706941 -84731539 + (CAGA)n Simple_repeat Simple_repeat 1 41 0 776 208 0 91 chr17 707277 707480 -84731000 - L1MA10 LINE L1 -1 6333 6152 2009 114 3 7 chr17 707480 707791 -84730689 + AluSg SINE Alu 2 310 0 776 208 0 91 chr17 707791 707818 -84730662 - L1MA10 LINE L1 -182 6152 6124 25 0 0 0 chr17 707893 707918 -84730562 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr17 708484 708544 -84729936 + AT_rich Low_complexity Low_complexity 1 60 0 712 258 117 11 chr17 708782 709065 -84729415 + L1MC4 LINE L1 7730 8042 0 287 247 65 0 chr17 709072 709149 -84729331 + HsTC2 DNA Tc2 1271 1352 -546 8802 26 0 1 chr17 709162 710181 -84728299 - L1P LINE L1 -1336 4810 3793 671 166 37 18 chr17 910181 910344 -84528136 + L1MB3 LINE L1 5976 6141 -42 2271 82 0 0 chr17 910345 910639 -84527841 + AluSx SINE Alu 1 294 -18 775 157 0 0 chr17 910672 910793 -84527687 - FRAM SINE Alu -14 162 42 789 174 8 8 chr17 910846 910978 -84527502 + FLAM_C SINE Alu 2 133 -10 2167 100 0 7 chr17 910984 911284 -84527196 + AluSg SINE Alu 3 300 -10 1241 159 4 41 chr17 911548 911818 -84526662 - AluSq SINE Alu -53 260 1 1679 164 20 7 chr17 912032 912337 -84526143 - AluJo SINE Alu -3 309 1 657 158 0 0 chr17 912500 912601 -84525879 + AluJ/FLAM SINE Alu 2 102 -210 809 131 0 8 chr17 912805 912935 -84525545 + AluSp/q SINE Alu 168 296 -17 954 150 131 77 chr17 912935 913077 -84525403 - AluJo SINE Alu -20 292 159 2059 115 0 10 chr17 913077 913390 -84525090 - AluSg SINE Alu 0 310 1 954 150 131 77 chr17 913390 913507 -84524973 - AluJo SINE Alu -153 159 19 339 252 36 29 chr17 913640 913779 -84524701 - L1M4 LINE L1 -985 5161 5022 895 97 15 15 chr17 913779 913913 -84524567 + AluSq/x SINE Alu 1 134 -179 1988 99 3 66 chr17 913965 914298 -84524182 - AluSx SINE Alu 0 312 1 232 301 54 0 chr17 914397 914490 -84523990 + L1MC4a LINE L1 6080 6177 -1631 486 154 240 29 chr17 914520 914624 -84523856 + AluJb SINE Alu 2 127 -185 2032 108 0 7 chr17 914751 915048 -84523432 - AluSx SINE Alu -17 295 1 932 67 7 22 chr17 915051 915186 -84523294 - AluSq/x SINE Alu -180 133 1 372 281 221 15 chr17 915193 915524 -84522956 + L2 LINE L2 1693 2091 -1223 2155 80 0 13 chr17 915585 915886 -84522594 - AluSc SINE Alu -12 297 1 783 176 5 93 chr17 915985 916136 -84522344 + AluJb SINE Alu 137 269 -43 2277 68 7 3 chr17 916136 916444 -84522036 + AluY SINE Alu 1 309 -2 783 176 5 93 chr17 916444 916485 -84521995 + AluJb SINE Alu 269 312 0 496 291 104 33 chr17 916699 917004 -84521476 + L2 LINE L2 2736 3061 -211 2234 88 3 3 chr17 917068 917374 -84521106 - AluSg SINE Alu -4 306 1 398 286 24 52 chr17 917580 917790 -84520690 - L2 LINE L2 -211 3061 2858 2353 67 3 0 chr17 918119 918417 -84520063 + AluSx SINE Alu 1 299 -13 296 292 18 44 chr17 918422 918535 -84519945 + L2 LINE L2 3163 3272 0 2128 105 0 7 chr17 918646 918951 -84519529 - AluY SINE Alu -8 303 1 715 183 0 30 chr17 919238 919369 -84519111 - FLAM_C SINE Alu -15 128 2 259 318 67 72 chr17 919463 919658 -84518822 + L2 LINE L2 3001 3194 -78 1070 136 28 0 chr17 919662 919839 -84518641 - AluSg/x SINE Alu 0 310 129 1996 116 0 7 chr17 919844 920160 -84518320 - AluSx SINE Alu 0 314 1 241 95 71 0 chr17 920372 920414 -84518066 + L2 LINE L2 3264 3308 -5 2178 100 6 3 chr17 920491 920802 -84517678 - AluSq SINE Alu -1 312 1 235 270 50 0 chr17 920810 920910 -84517570 - L1P LINE L1 -781 5370 5266 442 179 0 13 chr17 921069 921147 -84517333 - FLAM SINE Alu -17 126 50 1758 159 37 7 chr17 921212 921507 -84516973 + AluJb SINE Alu 1 304 -8 248 268 0 18 chr17 921522 921578 -84516902 + AluSg/x SINE Alu 124 178 -122 327 167 95 36 chr17 921647 921731 -84516749 - L1MA9 LINE L1 0 6312 6224 2136 105 39 60 chr17 921879 922098 -84516382 - THE1C LTR MaLR -2 373 164 1912 137 0 19 chr17 922098 922413 -84516067 + AluSx SINE Alu 3 311 -1 2136 105 39 60 chr17 922413 922574 -84515906 - THE1C LTR MaLR -211 164 1 2080 113 0 0 chr17 922669 922961 -84515519 - AluSx SINE Alu -20 292 1 699 281 186 30 chr17 922984 923382 -84515098 - MLT1K LTR MaLR -10 578 119 791 271 42 42 chr17 923528 923603 -84514877 - L1M4 LINE L1 -1440 4706 4632 2186 63 0 78 chr17 923603 923937 -84514543 - AluY SINE Alu -3 308 1 791 271 42 42 chr17 923937 924238 -84514242 - L1M4 LINE L1 -1513 4633 4330 1124 107 0 34 chr17 924261 924438 -84514042 + AluSq SINE Alu 1 171 -142 892 239 83 73 chr17 924618 924777 -84513703 - HAL1 LINE L1 -5 2502 2346 1726 131 0 64 chr17 924777 925091 -84513389 - AluSx SINE Alu -18 294 1 2002 117 0 13 chr17 925091 925389 -84513091 - AluSx SINE Alu -18 294 1 892 239 83 73 chr17 925389 925500 -84512980 - HAL1 LINE L1 -161 2346 2238 1946 127 3 7 chr17 925500 925808 -84512672 - AluSp SINE Alu -6 307 1 892 239 83 73 chr17 925808 926054 -84512426 - HAL1 LINE L1 -269 2238 1979 1419 269 56 87 chr17 926432 926503 -84511977 + L1MC4 LINE L1 6875 6947 -1095 1553 165 3 32 chr17 926503 926812 -84511668 + AluJo SINE Alu 1 300 -12 1419 269 56 87 chr17 926812 926965 -84511515 + L1MC4 LINE L1 6947 7103 -939 2025 125 0 3 chr17 926965 927262 -84511218 + AluSx SINE Alu 1 296 -16 1419 269 56 87 chr17 927262 927676 -84510804 + L1MC4 LINE L1 7103 7529 -513 2152 106 0 0 chr17 927676 927979 -84510501 - AluSx SINE Alu -9 303 1 1419 269 56 87 chr17 927979 928106 -84510374 + L1MC4 LINE L1 7529 7658 -384 1400 143 68 34 chr17 928106 928399 -84510081 + AluJo SINE Alu 1 303 -9 1419 269 56 87 chr17 928399 928708 -84509772 + L1MC4 LINE L1 7658 7918 -124 311 224 247 52 chr17 928708 928882 -84509598 + LTR50 LTR ERVL 1 208 -587 856 170 78 61 chr17 928897 928991 -84509489 + L1M4 LINE L1 4934 5025 -1121 2185 60 23 10 chr17 928991 929290 -84509190 - AluY SINE Alu -8 303 1 856 170 78 61 chr17 929290 929425 -84509055 + L1M4 LINE L1 5025 5167 -979 1651 116 27 37 chr17 929426 929720 -84508760 + AluJb SINE Alu 1 291 -21 906 68 0 23 chr17 929728 929861 -84508619 + AluSq/x SINE Alu 1 130 -182 2230 97 7 0 chr17 929988 930297 -84508183 + AluY SINE Alu 1 311 0 2247 74 3 7 chr17 930313 930623 -84507857 + AluY SINE Alu 1 309 -2 432 0 0 0 chr17 930954 931002 -84507478 + (TA)n Simple_repeat Simple_repeat 2 49 0 387 133 0 112 chr17 931004 931102 -84507378 - LTR9 LTR ERV1 -90 522 436 2114 74 10 10 chr17 931102 931399 -84507081 - AluY SINE Alu -14 297 1 477 240 4 28 chr17 931407 931546 -84506934 + L1MD2 LINE L1 6235 7983 -12 1593 168 13 35 chr17 931861 932036 -84506444 - AluJo SINE Alu -9 303 137 2110 93 0 60 chr17 932036 932369 -84506111 - AluSp SINE Alu 0 313 1 1593 168 13 35 chr17 932369 932503 -84505977 - AluJo SINE Alu -175 137 1 246 32 0 0 chr17 932506 932537 -84505943 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 641 188 0 0 chr17 932551 932652 -84505828 - AluJ/FLAM SINE Alu -210 102 2 289 113 31 216 chr17 932654 932751 -84505729 - AluJo SINE Alu -159 143 65 854 107 0 0 chr17 932766 932888 -84505592 + AluSg/x SINE Alu 176 297 -15 406 93 0 0 chr17 932889 932943 -84505537 + Alu SINE Alu 2 55 -256 1897 97 3 58 chr17 934230 934540 -84503940 - AluY SINE Alu -18 293 1 2262 50 0 31 chr17 934594 934915 -84503565 + AluY SINE Alu 1 311 0 1832 140 0 37 chr17 934930 935251 -84503229 + AluSx SINE Alu 1 309 -3 351 267 168 31 chr17 935668 935829 -84502651 + MLT1K LTR MaLR 315 497 -91 795 163 0 8 chr17 935837 935966 -84502514 - FLAM_C SINE Alu -5 128 1 1384 171 36 26 chr17 937537 937841 -84500639 + AluJo SINE Alu 1 307 -5 1919 101 14 20 chr17 937927 938224 -84500256 + AluY SINE Alu 1 295 -16 1892 119 10 13 chr17 938578 938880 -84499600 + AluSx SINE Alu 1 301 -11 2252 97 0 3 chr17 938959 939270 -84499210 + AluSx SINE Alu 1 310 -2 1743 112 4 14 chr17 940004 940280 -84498200 - AluSg SINE Alu -7 303 31 1903 42 36 46 chr17 940341 940647 -84497833 + AluY SINE Alu 2 304 -7 377 210 49 0 chr17 941117 941198 -84497282 + L1ME LINE L1 5529 5613 -508 1011 139 0 18 chr17 941251 941416 -84497064 + FRAM SINE Alu 1 162 -4 2231 57 10 14 chr17 941557 941853 -84496627 - AluY SINE Alu -16 295 1 1629 151 21 0 chr17 941881 942172 -84496308 + AluSg SINE Alu 1 297 -13 423 227 62 39 chr17 942303 942431 -84496049 - L1MB7 LINE L1 -10 6174 6044 1362 172 50 17 chr17 942440 942737 -84495743 - AluJb SINE Alu -5 307 1 243 259 82 12 chr17 942851 942936 -84495544 - MLT1H LTR MaLR -50 499 409 973 230 65 21 chr17 942968 943259 -84495221 - MLT1H LTR MaLR -245 304 1 1166 114 12 0 chr17 943354 943520 -84494960 - AluSq SINE Alu -19 294 127 831 112 0 0 chr17 943521 943646 -84494834 + (TA)n Simple_repeat Simple_repeat 1 125 0 2265 78 0 34 chr17 943646 943968 -84494512 - AluY SINE Alu 0 311 1 288 293 99 26 chr17 944297 944488 -84493992 - L1M4 LINE L1 -1466 4680 4476 294 352 7 7 chr17 944492 944634 -84493846 - L1M4 LINE L1 -2313 3833 3692 483 91 0 0 chr17 944749 944815 -84493665 - FLAM SINE Alu -32 111 46 208 62 0 31 chr17 944815 944847 -84493633 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 276 77 0 0 chr17 944873 944912 -84493568 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 307 167 0 0 chr17 944913 944961 -84493519 - AluS SINE Alu -26 274 227 357 62 0 0 chr17 944961 945009 -84493471 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1821 117 0 18 chr17 945010 945291 -84493189 - AluSx SINE Alu -36 276 1 225 0 0 0 chr17 945297 945322 -84493158 + (T)n Simple_repeat Simple_repeat 1 25 0 388 231 51 8 chr17 945415 945532 -84492948 - L1ME4a LINE L1 -45 6076 5955 1751 140 3 29 chr17 945690 945997 -84492483 - AluJo SINE Alu -12 300 2 2079 94 0 17 chr17 946006 946303 -84492177 - AluSc SINE Alu -17 292 1 2268 93 0 0 chr17 947299 947600 -84490880 + AluSx SINE Alu 1 301 -11 1393 139 154 23 chr17 947719 947985 -84490495 - AluJb SINE Alu -1 301 1 845 128 0 47 chr17 948063 948198 -84490282 + FLAM_C SINE Alu 1 130 -182 1928 144 10 7 chr17 948198 948504 -84489976 + AluSx SINE Alu 1 307 -5 845 128 0 47 chr17 948504 948517 -84489963 + FLAM_C SINE Alu 130 142 -170 2206 56 42 7 chr17 948575 948862 -84489618 + AluY SINE Alu 1 297 -14 259 282 24 12 chr17 948877 948962 -84489518 - MIR SINE MIR -80 182 97 1003 106 0 59 chr17 949076 949246 -84489234 - AluSc SINE Alu -148 161 2 2217 79 0 13 chr17 950816 951120 -84487360 - AluY SINE Alu -11 300 1 180 0 0 0 chr17 951206 951226 -84487254 + (A)n Simple_repeat Simple_repeat 1 20 0 232 156 0 0 chr17 951376 951421 -84487059 + Alu SINE Alu 256 300 0 711 262 59 0 chr17 951434 951621 -84486859 + MIR SINE MIR 65 262 0 1703 166 13 10 chr17 951640 951947 -84486533 + AluJo SINE Alu 5 312 0 1809 81 37 7 chr17 952304 952604 -84485876 + AluSg SINE Alu 1 308 0 1926 98 13 36 chr17 952940 953245 -84485235 - AluSq SINE Alu -15 298 1 1919 114 21 7 chr17 953333 953623 -84484857 - AluSc SINE Alu -15 294 1 1903 117 21 24 chr17 953630 953920 -84484560 - AluSx SINE Alu -23 289 1 312 225 42 108 chr17 954180 954300 -84484180 + MIR SINE MIR 15 126 -136 402 276 68 44 chr17 954446 954583 -84483897 + L1ME LINE L1 5307 5452 -669 1538 140 51 27 chr17 954583 954875 -84483605 + AluSx SINE Alu 1 299 -13 402 276 68 44 chr17 954875 954918 -84483562 + L1ME LINE L1 5452 5492 -629 1910 135 0 10 chr17 954981 955277 -84483203 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr17 955277 955306 -84483174 + AT_rich Low_complexity Low_complexity 1 29 0 2022 45 0 11 chr17 955377 955641 -84482839 - AluY SINE Alu -12 299 39 1475 253 54 83 chr17 955660 956354 -84482126 + L1MC4a LINE L1 5011 5724 -430 2122 105 3 0 chr17 956354 956650 -84481830 - AluSx SINE Alu -15 297 1 1475 253 54 83 chr17 956650 956790 -84481690 + L1MC4a LINE L1 5724 5343 -811 1609 111 0 137 chr17 956790 957132 -84481348 - AluSx SINE Alu -7 295 1 1475 253 54 83 chr17 957132 957239 -84481241 + L1MC4a LINE L1 5342 5451 -703 1375 274 116 18 chr17 957411 958030 -84480450 + L1ME4a LINE L1 5445 6120 -1 788 154 15 8 chr17 958518 958648 -84479832 - FLAM_C SINE Alu -11 132 2 2378 52 0 7 chr17 958827 959148 -84479332 - AluSg SINE Alu 0 319 1 2195 61 29 0 chr17 959156 959436 -84479044 - AluY SINE Alu -23 288 1 909 116 0 0 chr17 959449 959570 -84478910 - FLAM_C SINE Alu -12 121 1 1028 137 25 6 chr17 959794 959955 -84478525 + AluSx SINE Alu 61 224 -88 1137 151 16 68 chr17 959955 960032 -84478448 - AluJo SINE Alu -73 239 160 4678 138 44 5 chr17 960032 960788 -84477692 + LTR1 LTR ERV1 1 785 0 1137 151 16 68 chr17 960788 960962 -84477518 - AluJo SINE Alu -152 160 1 1994 142 0 0 chr17 961124 961426 -84477054 + AluSx SINE Alu 1 302 -10 1372 144 0 25 chr17 961781 962017 -84476463 - AluJb SINE Alu -24 288 59 2138 111 7 3 chr17 962024 962331 -84476149 - AluSx SINE Alu -4 308 1 2036 128 0 0 chr17 962429 962725 -84475755 - AluSx SINE Alu -16 296 1 413 141 99 91 chr17 962842 962913 -84475567 + L1MC4 LINE L1 7921 7995 -47 1698 141 24 14 chr17 962913 963203 -84475277 - AluSx SINE Alu -19 293 1 413 141 99 91 chr17 963203 963252 -84475228 + L1MC4 LINE L1 7995 8042 0 382 219 109 17 chr17 963391 963510 -84474970 + L1M4 LINE L1 2784 2913 -3233 2194 101 0 13 chr17 963741 964057 -84474423 - AluSx SINE Alu 0 312 1 841 123 8 0 chr17 964060 964190 -84474290 - AluSq/x SINE Alu -182 131 1 1907 123 24 7 chr17 966280 966572 -84471908 + AluSq SINE Alu 1 297 -16 2327 93 0 3 chr17 967215 967526 -84470954 - AluSx SINE Alu -2 310 1 1284 157 31 100 chr17 967526 967690 -84470790 - AluSq SINE Alu -5 298 165 225 0 0 0 chr17 967690 967715 -84470765 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1284 157 31 100 chr17 967715 967869 -84470611 - AluSq SINE Alu -138 165 2 1206 127 0 64 chr17 968039 968322 -84470158 - AluSq SINE Alu -11 302 38 194 318 14 99 chr17 968688 968911 -84469569 + L2 LINE L2 2858 3061 -211 539 303 134 70 chr17 969753 970284 -84468196 + L2 LINE L2 1616 2230 -1084 1702 103 0 26 chr17 970284 970557 -84467923 - AluSx SINE Alu -46 266 1 539 303 134 70 chr17 970557 970933 -84467547 + L2 LINE L2 2230 2581 -733 2327 70 0 3 chr17 971097 971395 -84467085 - AluY SINE Alu -14 297 1 1780 104 0 83 chr17 971395 971732 -84466748 - AluSx SINE Alu -3 309 1 2182 107 0 0 chr17 971888 972188 -84466292 - AluSx SINE Alu -12 300 1 532 273 116 12 chr17 972193 972365 -84466115 + MIR SINE MIR 71 260 -2 22 0 0 0 chr17 972402 972424 -84466056 + AT_rich Low_complexity Low_complexity 1 22 0 1808 119 0 14 chr17 972425 972731 -84465749 - AluSg SINE Alu 0 302 1 399 232 8 72 chr17 972741 972866 -84465614 + L2 LINE L2 3197 3313 0 1955 124 24 7 chr17 973079 973377 -84465103 + AluSp SINE Alu 1 303 -10 1930 122 14 0 chr17 973408 973702 -84464778 + AluSx SINE Alu 1 298 -14 916 137 0 0 chr17 973734 973865 -84464615 - FLAM_C SINE Alu -2 131 1 331 212 111 12 chr17 974227 974318 -84464162 - MIR SINE MIR -20 188 89 1533 163 46 14 chr17 974383 974666 -84463814 - AluSx SINE Alu -20 292 1 1375 166 3 62 chr17 974670 974978 -84463502 - AluJo SINE Alu -22 290 1 2165 104 24 6 chr17 974978 975315 -84463165 - HSMAR2 DNA Mariner -958 344 2 669 172 0 33 chr17 975362 975484 -84462996 + FLAM_C SINE Alu 1 118 -15 1765 129 22 7 chr17 975632 975933 -84462547 - AluSx SINE Alu 0 305 1 2373 201 50 56 chr17 975934 976191 -84462289 - L1ME2 LINE L1 -34 6130 5873 1462 163 13 60 chr17 976191 976365 -84462115 - AluJo SINE Alu -18 294 138 2172 91 0 7 chr17 976365 976663 -84461817 - AluSc SINE Alu -13 296 1 1462 163 13 60 chr17 976663 976788 -84461692 - AluJo SINE Alu -174 138 9 2373 201 50 56 chr17 976788 977538 -84460942 - L1ME2 LINE L1 -291 5873 5120 2191 93 6 3 chr17 977538 977850 -84460630 + AluSq SINE Alu 1 313 0 2203 94 3 0 chr17 977856 978155 -84460325 + AluSp SINE Alu 5 304 -9 2373 201 50 56 chr17 978155 978372 -84460108 - L1ME2 LINE L1 -1049 5115 4865 2191 72 0 35 chr17 978372 978691 -84459789 - AluY SINE Alu -3 308 1 2373 201 50 56 chr17 978691 978858 -84459622 - L1ME2 LINE L1 -1299 4865 4699 1204 141 9 18 chr17 978881 979108 -84459372 - AluSx SINE Alu -29 283 59 257 274 61 61 chr17 979163 979408 -84459072 - L1ME2 LINE L1 -1958 4188 3944 464 139 0 0 chr17 979890 979962 -84458518 + AluS SINE Alu 2 73 -239 1982 96 13 20 chr17 979976 980278 -84458202 - AluY SINE Alu -11 300 1 460 283 75 0 chr17 980278 980437 -84458043 - L1M4 LINE L1 -1270 4876 4706 2136 117 3 0 chr17 980439 980748 -84457732 - AluSx SINE Alu -2 310 1 756 164 14 29 chr17 980758 980898 -84457582 - FRAM SINE Alu -15 161 24 1681 153 11 0 chr17 980911 981186 -84457294 - AluJb SINE Alu -3 309 32 1507 171 21 7 chr17 981260 981422 -84457058 - AluJo SINE Alu -13 299 130 2027 107 0 0 chr17 981422 981703 -84456777 - AluY SINE Alu -22 289 9 1507 171 21 7 chr17 981703 981826 -84456654 - AluJo SINE Alu -182 130 10 2032 213 95 131 chr17 981838 981909 -84456571 - L1M4 LINE L1 -1679 4467 4395 1984 121 13 10 chr17 981909 982216 -84456264 + AluSx SINE Alu 1 308 -4 2032 213 95 131 chr17 982216 982426 -84456054 - L1M4 LINE L1 -1751 4395 4179 1988 119 20 3 chr17 982426 982729 -84455751 - AluSx SINE Alu -4 308 1 2032 213 95 131 chr17 982729 983165 -84455315 - L1M4 LINE L1 -1967 4179 3682 715 141 16 25 chr17 983165 983286 -84455194 - FLAM_C SINE Alu -15 128 9 2032 213 95 131 chr17 983286 983642 -84454838 - L1M4 LINE L1 -2464 3682 3315 203 313 167 0 chr17 984391 984487 -84453993 - MER5A DNA MER1_type -1 188 77 213 303 107 73 chr17 984532 984747 -84453733 + L2 LINE L2 3021 3246 -26 405 0 0 0 chr17 984747 984792 -84453688 + (TTA)n Simple_repeat Simple_repeat 2 46 0 213 303 107 73 chr17 984792 984810 -84453670 + L2 LINE L2 3246 3262 -10 820 133 0 30 chr17 986114 986249 -84452231 - AluSq/x SINE Alu -181 132 2 351 0 0 0 chr17 986324 986363 -84452117 + (TG)n Simple_repeat Simple_repeat 2 40 0 1355 190 3 33 chr17 986426 986731 -84451749 + AluJo SINE Alu 9 304 -8 1094 135 0 16 chr17 986873 987058 -84451422 + AluSq SINE Alu 54 235 -78 1440 191 3 24 chr17 987164 987462 -84451018 + AluJo SINE Alu 13 304 -8 1531 198 0 6 chr17 987550 987863 -84450617 + AluJb SINE Alu 1 311 -1 643 175 175 35 chr17 987977 988205 -84450275 - HAL1b LINE L1 -702 646 387 1805 105 16 35 chr17 988215 988530 -84449950 - AluY SINE Alu -2 309 1 1834 95 46 18 chr17 989659 989943 -84448537 + AluSg SINE Alu 1 292 -18 856 231 64 8 chr17 989953 990187 -84448293 + L1MB7 LINE L1 5937 6183 -1 1920 90 4 11 chr17 990252 990519 -84447961 + AluSx SINE Alu 1 265 -47 1817 118 0 8 chr17 990527 990789 -84447691 - AluSg1 SINE Alu -49 260 1 1341 221 47 9 chr17 990791 991108 -84447372 - L1M4 LINE L1 -362 5822 5494 2525 49 0 0 chr17 991212 991518 -84446962 - AluY SINE Alu -4 307 2 400 326 144 26 chr17 991519 991789 -84446691 - L1M4 LINE L1 -1955 4191 3890 2251 102 0 0 chr17 991817 992112 -84446368 + AluSx SINE Alu 1 295 -17 1898 114 3 23 chr17 992178 992477 -84446003 + AluSx SINE Alu 1 293 -19 2068 104 14 0 chr17 992552 992839 -84445641 + AluSx SINE Alu 11 301 -11 1347 197 71 94 chr17 992863 993471 -84445009 - L1MC5 LINE L1 -30 7931 7338 451 246 143 29 chr17 993474 993649 -84444831 - L1M4 LINE L1 -2364 3782 3588 280 314 133 54 chr17 994077 994519 -84443961 - L2 LINE L2 -10 3303 2827 1923 129 0 10 chr17 995348 995643 -84442837 + AluSx SINE Alu 7 298 -14 181 264 0 38 chr17 995904 995957 -84442523 + L2 LINE L2 3222 3272 0 1264 189 4 15 chr17 996381 996641 -84441839 + AluJo SINE Alu 16 272 -40 395 337 51 10 chr17 996661 996857 -84441623 + L1M4 LINE L1 5189 5392 -754 2244 233 33 75 chr17 996874 997125 -84441355 - L1MEc LINE L1 -2056 4159 3899 1654 115 39 0 chr17 997125 997285 -84441195 - AluSx SINE Alu -19 293 118 300 27 0 0 chr17 997285 997322 -84441158 + (TG)n Simple_repeat Simple_repeat 2 38 0 1654 115 39 0 chr17 997322 997421 -84441059 - AluSx SINE Alu -194 118 24 2244 233 33 75 chr17 997421 997930 -84440550 - L1MEc LINE L1 -2316 3899 3431 1322 161 106 25 chr17 997997 998271 -84440209 + AluJb SINE Alu 1 296 -16 1856 120 0 20 chr17 998271 998570 -84439910 + AluSg SINE Alu 1 294 -16 28 111 0 0 chr17 998576 998657 -84439823 + AT_rich Low_complexity Low_complexity 1 81 0 826 107 0 9 chr17 998657 998769 -84439711 - AluSq/x SINE Alu -179 133 23 1258 202 86 5 chr17 998836 999207 -84439273 - L1MEc LINE L1 -2907 3308 2908 234 91 0 0 chr17 999208 999241 -84439239 + (T)n Simple_repeat Simple_repeat 1 33 0 2009 124 0 13 chr17 1000432 1000730 -84437750 - AluSx SINE Alu -13 299 6 1904 209 54 14 chr17 1000732 1000834 -84437646 - L1MEc LINE L1 -3287 2928 2832 1919 136 0 3 chr17 1000834 1001176 -84437304 - AluSx SINE Alu 0 341 1 1904 209 54 14 chr17 1001176 1001588 -84436892 - L1MEc LINE L1 -3383 2832 2392 1363 177 0 61 chr17 1001589 1001773 -84436707 - AluJb SINE Alu -1 311 117 180 97 0 0 chr17 1001773 1001804 -84436676 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2027 89 4 4 chr17 1001804 1002075 -84436405 - AluSc SINE Alu -28 281 11 1363 177 0 61 chr17 1002075 1002199 -84436281 - AluJb SINE Alu -193 119 21 834 147 61 25 chr17 1002257 1002420 -84436060 - AluJo SINE Alu -142 170 2 2507 271 46 21 chr17 1002420 1003268 -84435212 - L1MEc LINE L1 -5241 1155 287 565 296 8 46 chr17 1003458 1003698 -84434782 - HAL1 LINE L1 -25 2482 2252 1595 132 26 58 chr17 1003711 1003877 -84434603 - AluJo SINE Alu -11 301 148 2081 80 30 13 chr17 1003877 1004179 -84434301 - AluY SINE Alu -4 307 1 1595 132 26 58 chr17 1004179 1004323 -84434157 - AluJo SINE Alu -164 148 1 1913 132 4 0 chr17 1004401 1004707 -84433773 - AluSx SINE Alu 0 307 1 2237 73 16 7 chr17 1004707 1005009 -84433471 - AluSq SINE Alu -7 306 1 1396 183 20 40 chr17 1005013 1005176 -84433304 - AluJb SINE Alu -10 302 137 387 0 0 0 chr17 1005176 1005219 -84433261 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2162 77 3 3 chr17 1005219 1005504 -84432976 - AluSx SINE Alu -27 285 1 1396 183 20 40 chr17 1005504 1005639 -84432841 - AluJb SINE Alu -173 139 9 2134 105 0 10 chr17 1006248 1006552 -84431928 + AluSq SINE Alu 2 302 -11 1752 87 4 16 chr17 1006665 1006918 -84431562 + AluSx SINE Alu 55 304 -8 279 203 101 29 chr17 1006918 1006987 -84431493 + AluSc SINE Alu 132 205 -94 242 281 104 67 chr17 1007101 1007236 -84431244 - MIR3 SINE MIR -9 199 60 343 266 60 54 chr17 1007601 1007785 -84430695 - L1MC4a LINE L1 -1748 6060 5876 822 191 0 0 chr17 1007808 1007934 -84430546 - FLAM_C SINE Alu -16 127 2 1693 168 0 13 chr17 1007960 1008263 -84430217 + AluJb SINE Alu 1 299 -13 1989 112 6 22 chr17 1008314 1008626 -84429854 - AluSx SINE Alu -5 307 1 850 122 0 41 chr17 1008627 1008774 -84429706 - AluSq/x SINE Alu -172 141 1 183 42 0 0 chr17 1009347 1009371 -84429109 + (TG)n Simple_repeat Simple_repeat 2 25 0 1679 178 0 19 chr17 1009439 1009754 -84428726 + AluJo SINE Alu 1 309 -3 1252 191 10 54 chr17 1009818 1010132 -84428348 + AluJb SINE Alu 3 302 0 1530 118 118 19 chr17 1010519 1010790 -84427690 + AluSg SINE Alu 1 298 -12 2084 86 0 20 chr17 1011291 1011594 -84426886 + AluSq SINE Alu 1 297 -16 502 316 62 29 chr17 1012059 1012303 -84426177 + MIR SINE MIR 11 262 0 1235 172 28 16 chr17 1012497 1012747 -84425733 - L1MB3 LINE L1 -7 6176 5924 1384 170 147 8 chr17 1014787 1015052 -84423428 - AluJo SINE Alu 0 302 1 2173 119 0 13 chr17 1015785 1016095 -84422385 + AluSx SINE Alu 1 306 -6 329 0 0 24 chr17 1016095 1016137 -84422343 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 0 0 30 chr17 1016136 1016169 -84422311 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 1710 149 13 30 chr17 1016328 1016629 -84421851 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 1016738 1016759 -84421721 + AT_rich Low_complexity Low_complexity 1 21 0 2102 120 0 10 chr17 1018405 1018713 -84419767 + AluSx SINE Alu 1 305 -7 1939 126 0 23 chr17 1020087 1020389 -84418091 + AluSx SINE Alu 2 296 -16 1783 132 16 46 chr17 1024567 1024870 -84413610 + AluSx SINE Alu 1 294 -18 217 267 0 67 chr17 1025397 1025472 -84413008 - MIR SINE MIR -79 129 60 1357 95 11 0 chr17 1026176 1026365 -84412115 - AluSg/x SINE Alu -18 294 104 2108 71 0 14 chr17 1026365 1026646 -84411834 - AluSg SINE Alu -33 277 1 344 93 0 0 chr17 1026652 1026706 -84411774 - Alu SINE Alu -7 294 241 227 351 0 0 chr17 1026713 1026790 -84411690 + L2 LINE L2 3232 3308 -5 1967 85 50 7 chr17 1026940 1027222 -84411258 + AluSx SINE Alu 2 295 -17 327 250 179 18 chr17 1027234 1027600 -84410880 + L2 LINE L2 2765 3191 -122 474 266 112 115 chr17 1029557 1029843 -84408637 + L2 LINE L2 2985 3269 -3 2185 105 3 10 chr17 1029848 1030162 -84408318 - AluSx SINE Alu 0 312 1 1492 174 60 11 chr17 1030162 1030444 -84408036 - AluJb SINE Alu -15 297 2 2141 108 0 13 chr17 1031214 1031520 -84406960 + AluSq SINE Alu 1 302 -11 201 313 30 0 chr17 1031586 1031653 -84406827 + MIR SINE MIR 70 138 -70 2122 80 0 21 chr17 1031793 1032103 -84406377 - AluY SINE Alu 0 304 1 2127 105 0 13 chr17 1032103 1032408 -84406072 - AluSq SINE Alu -12 301 1 2169 90 3 39 chr17 1032991 1033132 -84405348 + AluSx SINE Alu 1 145 -167 2045 81 3 14 chr17 1033132 1033439 -84405041 + AluSc SINE Alu 1 304 0 2169 90 3 39 chr17 1033439 1033606 -84404874 + AluSx SINE Alu 145 299 -13 567 120 0 22 chr17 1033882 1033974 -84404506 + AluS SINE Alu 1 90 -222 1123 112 0 0 chr17 1033974 1034135 -84404345 - AluSg/x SINE Alu -18 294 134 1721 152 3 23 chr17 1034135 1034438 -84404042 - AluSg SINE Alu -13 297 1 307 350 105 35 chr17 1034445 1034645 -84403835 + L2 LINE L2 3099 3312 -1 2201 56 3 30 chr17 1035268 1035573 -84402907 - AluY SINE Alu -14 297 1 181 288 136 15 chr17 1035576 1035642 -84402838 - MER5A DNA MER1_type -115 74 1 2242 96 3 3 chr17 1037101 1037404 -84401076 - AluSp SINE Alu -10 303 1 2240 78 3 13 chr17 1038291 1038597 -84399883 - AluSp SINE Alu -10 303 1 258 258 176 0 chr17 1039497 1039638 -84398842 - MIR SINE MIR -75 187 13 212 214 5 88 chr17 1039977 1040169 -84398311 + CT-rich Low_complexity Low_complexity 3 178 0 230 263 0 59 chr17 1040247 1040399 -84398081 + CT-rich Low_complexity Low_complexity 4 146 0 227 226 11 74 chr17 1040477 1040667 -84397813 + CT-rich Low_complexity Low_complexity 3 180 0 224 195 0 103 chr17 1040832 1041027 -84397453 + CT-rich Low_complexity Low_complexity 3 177 0 985 81 0 29 chr17 1041183 1041319 -84397161 + FLAM_C SINE Alu 1 132 -1 694 289 56 5 chr17 1042797 1042994 -84395486 - MIR SINE MIR -28 234 28 2240 84 0 7 chr17 1044530 1044826 -84393654 - AluY SINE Alu -17 294 1 604 104 208 19 chr17 1044828 1044934 -84393546 - AluSg SINE Alu -179 131 6 2282 98 0 0 chr17 1045176 1045482 -84392998 - AluSg SINE Alu -4 306 1 330 309 81 7 chr17 1045506 1045642 -84392838 - MIR SINE MIR -110 152 7 328 217 29 0 chr17 1046559 1046628 -84391852 + MIR SINE MIR 76 146 -62 324 346 22 15 chr17 1046628 1046764 -84391716 - L2 LINE L2 0 3313 3177 2208 100 0 16 chr17 1047737 1048047 -84390433 - AluSx SINE Alu -6 306 2 1840 109 0 84 chr17 1048059 1048380 -84390100 - AluSg SINE Alu -16 294 1 900 91 0 8 chr17 1048390 1048511 -84389969 - FLAM_C SINE Alu -21 122 3 389 235 198 43 chr17 1048515 1048677 -84389803 - MIR3 SINE MIR -10 198 12 276 344 81 63 chr17 1049933 1050000 -84388480 + L2 LINE L2 2835 2899 -414 1985 108 0 91 chr17 1050000 1050341 -84388139 - AluSg SINE Alu 0 310 1 276 344 81 63 chr17 1050341 1050525 -84387955 + L2 LINE L2 2899 3078 -235 2321 86 0 3 chr17 1050525 1050826 -84387654 - AluSx SINE Alu -12 300 1 276 344 81 63 chr17 1050826 1051018 -84387462 + L2 LINE L2 3078 3287 -26 2393 66 3 0 chr17 1051047 1051352 -84387128 - AluY SINE Alu -5 306 1 186 43 0 0 chr17 1051587 1051610 -84386870 + (TCC)n Simple_repeat Simple_repeat 2 24 0 248 238 24 24 chr17 1055191 1055275 -84383205 + G-rich Low_complexity Low_complexity 3 86 0 328 282 48 19 chr17 1056042 1056145 -84382335 - L1MC4 LINE L1 -478 7564 7459 1732 107 0 8 chr17 1056145 1056388 -84382092 + AluSx SINE Alu 1 241 -71 226 280 16 80 chr17 1056445 1056570 -84381910 - MIR SINE MIR -40 222 106 2268 86 7 0 chr17 1056675 1057071 -84381409 + AluY SINE Alu 1 311 0 2274 99 0 10 chr17 1057470 1057783 -84380697 + AluSg SINE Alu 1 310 0 2192 97 7 7 chr17 1057819 1058129 -84380351 + AluSx SINE Alu 1 310 -2 227 302 52 10 chr17 1058234 1058330 -84380150 - MIR SINE MIR -4 258 159 2403 61 3 0 chr17 1058331 1058624 -84379856 - AluSp SINE Alu -19 294 1 1791 161 3 10 chr17 1058627 1058925 -84379555 - AluJb SINE Alu -13 299 4 900 156 12 24 chr17 1058930 1059097 -84379383 - AluJo/FRAM SINE Alu -1 301 137 1312 115 0 11 chr17 1059100 1059291 -84379189 - AluSp SINE Alu -19 294 106 2071 84 40 17 chr17 1059690 1059987 -84378493 - AluSx SINE Alu -8 304 1 255 333 20 10 chr17 1060000 1060099 -84378381 - MER5A DNA MER1_type -83 106 7 1547 154 110 4 chr17 1060496 1060769 -84377711 - AluSx SINE Alu -10 302 1 866 121 15 23 chr17 1060779 1060911 -84377569 - FLAM_C SINE Alu -2 131 1 2219 63 0 22 chr17 1060914 1061230 -84377250 - AluY SINE Alu 0 311 3 21 36 0 0 chr17 1061234 1061262 -84377218 + AT_rich Low_complexity Low_complexity 1 28 0 204 275 87 72 chr17 1061343 1061387 -84377093 - MIR SINE MIR -177 85 38 942 216 22 57 chr17 1061387 1061614 -84376866 + MER20 DNA MER1_type 1 219 0 204 275 87 72 chr17 1061614 1061638 -84376842 - MIR SINE MIR -224 38 16 2305 77 0 13 chr17 1062089 1062402 -84376078 + AluSx SINE Alu 1 309 -3 23 92 0 0 chr17 1064650 1064715 -84373765 + GC_rich Low_complexity Low_complexity 1 65 0 224 269 44 19 chr17 1066011 1066171 -84372309 + A-rich Low_complexity Low_complexity 4 167 0 555 176 29 0 chr17 1066218 1066320 -84372160 + AluSg/x SINE Alu 187 291 -18 1332 183 32 32 chr17 1066694 1066820 -84371660 + AluJo SINE Alu 1 126 -186 2198 70 10 30 chr17 1066820 1067119 -84371361 - AluSq SINE Alu -20 293 1 1332 183 32 32 chr17 1067119 1067276 -84371204 + AluJo SINE Alu 125 284 -28 38 0 0 0 chr17 1067276 1067314 -84371166 + AT_rich Low_complexity Low_complexity 1 38 0 516 153 82 0 chr17 1068414 1068512 -84369968 + FLAM_A SINE Alu 22 127 -15 4579 141 44 31 chr17 1068512 1069144 -84369336 - Tigger1 DNA MER2_type -194 2224 1576 1483 147 124 15 chr17 1069144 1069409 -84369071 - AluJb SINE Alu -18 294 1 4579 141 44 31 chr17 1069409 1069665 -84368815 - Tigger1 DNA MER2_type -842 1576 1325 338 95 16 79 chr17 1069665 1069728 -84368752 - Tigger1 DNA MER2_type -1035 1383 1325 3573 127 11 21 chr17 1069767 1070383 -84368097 - Tigger1 DNA MER2_type -1012 1406 797 577 91 0 0 chr17 1070387 1070464 -84368016 - AluJo SINE Alu -10 302 226 1050 157 56 6 chr17 1070464 1070642 -84367838 - AluJo SINE Alu -125 187 1 1136 101 22 6 chr17 1070642 1070820 -84367660 - Tigger1 DNA MER2_type -1614 804 624 1556 165 38 70 chr17 1070820 1070961 -84367519 - Tigger1 DNA MER2_type -2060 358 214 2330 87 0 13 chr17 1070961 1071260 -84367220 + AluSc SINE Alu 1 295 -14 1556 165 38 70 chr17 1071260 1071289 -84367191 - Tigger1 DNA MER2_type -2204 214 186 1983 125 0 27 chr17 1071289 1071585 -84366895 + AluSx SINE Alu 1 288 -24 1556 165 38 70 chr17 1071585 1071783 -84366697 - Tigger1 DNA MER2_type -2232 186 1 411 200 0 67 chr17 1071783 1071872 -84366608 + MER58B DNA MER1_type 259 341 0 1652 203 0 20 chr17 1073029 1073335 -84365145 - AluJb SINE Alu -12 300 1 195 42 0 0 chr17 1073342 1073366 -84365114 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2490 82 0 3 chr17 1073413 1073718 -84364762 + AluSq SINE Alu 1 304 -9 250 232 0 18 chr17 1073727 1073783 -84364697 + L1MB7 LINE L1 5559 5613 -508 1913 158 21 0 chr17 1073785 1074076 -84364404 + AluJb SINE Alu 1 297 -15 2263 93 0 13 chr17 1074078 1074379 -84364101 + AluY SINE Alu 1 297 -14 2051 94 0 11 chr17 1075159 1075434 -84363046 - AluSx SINE Alu -40 272 1 2170 99 7 3 chr17 1075726 1076010 -84362470 - AluSq SINE Alu -17 296 12 1561 202 0 38 chr17 1077584 1077901 -84360579 - AluJo SINE Alu -7 305 1 1934 146 14 7 chr17 1077907 1078201 -84360279 - AluSx SINE Alu -16 296 1 612 187 15 8 chr17 1078236 1078370 -84360110 - L1MB3 LINE L1 -1 6182 6048 354 264 0 0 chr17 1078370 1078457 -84360023 + L1MB7 LINE L1 5938 6024 -160 311 213 85 53 chr17 1078464 1078558 -84359922 - L1MB3 LINE L1 -147 6036 5940 275 143 111 0 chr17 1078969 1079032 -84359448 - MIR SINE MIR -102 160 91 217 132 0 0 chr17 1079065 1079103 -84359377 + (T)n Simple_repeat Simple_repeat 1 38 0 518 140 190 10 chr17 1079216 1079316 -84359164 + FLAM_A SINE Alu 1 118 -15 2200 75 14 11 chr17 1079401 1079723 -84358757 - AluSx SINE Alu 0 323 1 542 257 56 76 chr17 1079734 1079983 -84358497 - MIR SINE MIR -4 258 15 333 303 49 16 chr17 1080465 1080587 -84357893 + MIR3 SINE MIR 76 201 -7 2329 68 11 4 chr17 1083937 1084243 -84354237 - AluSg SINE Alu 0 308 1 2060 124 3 7 chr17 1084291 1084581 -84353899 + AluJo SINE Alu 1 289 -23 2251 119 0 3 chr17 1084595 1084897 -84353583 + AluSx SINE Alu 5 305 -7 2116 78 0 119 chr17 1084946 1085290 -84353190 - AluSc SINE Alu -6 303 1 1881 140 14 7 chr17 1085429 1085721 -84352759 + AluSx SINE Alu 1 294 -18 959 98 98 20 chr17 1086337 1086490 -84351990 - AluSg/x SINE Alu -19 291 127 2196 92 7 3 chr17 1086499 1086804 -84351676 - AluY SINE Alu 0 306 1 2257 87 37 7 chr17 1086816 1087114 -84351366 - AluSp SINE Alu -6 307 1 2359 94 0 19 chr17 1087491 1087809 -84350671 - AluSx SINE Alu 0 312 1 2550 43 7 10 chr17 1090067 1090372 -84348108 + AluSp SINE Alu 1 304 -9 2340 88 7 19 chr17 1094514 1094822 -84343658 - AluSq SINE Alu -6 307 4 2413 103 3 0 chr17 1094874 1095184 -84343296 + AluSx SINE Alu 1 311 -1 192 356 33 22 chr17 1095923 1096013 -84342467 + MIR SINE MIR 124 214 -48 283 356 7 34 chr17 1096245 1096391 -84342089 + L3 LINE CR1 1296 1437 -140 2325 89 0 13 chr17 1096738 1097051 -84341429 + AluSx SINE Alu 1 309 -3 604 231 62 59 chr17 1097176 1097477 -84341003 + MLT1C LTR MaLR 5 316 -151 1012 172 22 43 chr17 1097477 1097709 -84340771 + AluJb SINE Alu 86 312 0 744 176 13 13 chr17 1097709 1097862 -84340618 + MLT1C LTR MaLR 306 458 -9 399 21 0 0 chr17 1098156 1098204 -84340276 + (CA)n Simple_repeat Simple_repeat 1 48 0 2473 54 0 16 chr17 1098269 1098583 -84339897 + AluY SINE Alu 1 309 -2 2078 114 3 23 chr17 1099382 1099689 -84338791 - AluSg SINE Alu -9 301 1 202 278 0 28 chr17 1102277 1102349 -84336131 + CT-rich Low_complexity Low_complexity 2 71 0 1878 141 7 23 chr17 1103816 1104121 -84334359 + AluSx SINE Alu 1 300 -12 2294 96 0 13 chr17 1104477 1104780 -84333700 - AluSx SINE Alu -13 299 1 693 163 0 0 chr17 1105378 1105501 -84332979 + FLAM_A SINE Alu 4 126 -7 22 0 0 0 chr17 1105501 1105523 -84332957 + AT_rich Low_complexity Low_complexity 1 22 0 2166 92 0 11 chr17 1105536 1105820 -84332660 + AluSx SINE Alu 1 281 -31 2302 79 7 0 chr17 1105826 1106133 -84332347 + AluY SINE Alu 1 309 0 279 323 76 76 chr17 1156359 1156660 -84281820 - L2 LINE L2 -64 3208 2905 2314 102 0 0 chr17 1156660 1156963 -84281517 + AluSx SINE Alu 1 303 -9 279 323 76 76 chr17 1156963 1157057 -84281423 - L2 LINE L2 -366 2906 2813 2343 97 0 0 chr17 1158209 1158519 -84279961 + AluSx SINE Alu 1 310 -2 335 254 120 14 chr17 1158524 1158666 -84279814 - MIR3 SINE MIR -41 167 11 264 59 0 0 chr17 1159789 1159823 -84278657 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 343 36 36 chr17 1160709 1160957 -84277523 + MIR SINE MIR 1 248 -14 2304 79 3 3 chr17 1163658 1163961 -84274519 - AluSx SINE Alu -9 303 1 1667 160 26 36 chr17 1163961 1164138 -84274342 - AluJb SINE Alu -9 303 129 2106 127 0 3 chr17 1164138 1164429 -84274051 + AluSx SINE Alu 1 290 -22 1667 160 26 36 chr17 1164429 1164557 -84273923 - AluJb SINE Alu -183 129 1 213 217 0 28 chr17 1165770 1165836 -84272644 + C-rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr17 1166500 1166530 -84271950 + GC_rich Low_complexity Low_complexity 1 30 0 231 236 0 0 chr17 1167427 1167499 -84270981 + CT-rich Low_complexity Low_complexity 3 74 0 437 330 157 22 chr17 1168320 1168587 -84269893 - L2 LINE L2 -6 3307 3005 2449 56 0 0 chr17 1168640 1168942 -84269538 + AluSg SINE Alu 1 302 -8 2166 99 26 0 chr17 1168948 1169250 -84269230 + AluSx SINE Alu 1 310 -2 239 298 96 0 chr17 1169449 1169543 -84268937 - L2 LINE L2 -217 3055 2953 757 140 0 66 chr17 1169608 1169744 -84268736 + FLAM_C SINE Alu 14 140 -3 264 274 36 24 chr17 1169932 1170016 -84268464 - MIR SINE MIR -76 132 48 1728 144 26 49 chr17 1171408 1171713 -84266767 + AluJo SINE Alu 1 298 -14 251 254 17 0 chr17 1172674 1172733 -84265747 - L2 LINE L2 -5 3267 3208 216 288 0 0 chr17 1173085 1173144 -84265336 + L2 LINE L2 3255 3313 0 1382 186 16 52 chr17 1173218 1173358 -84265122 + AluJo SINE Alu 1 144 -168 2374 74 0 16 chr17 1173358 1173667 -84264813 + AluSx SINE Alu 1 304 -8 1382 186 16 52 chr17 1173667 1173833 -84264647 + AluJo SINE Alu 144 296 -16 188 263 50 50 chr17 1173918 1174017 -84264463 + L2 LINE L2 3093 3191 -81 592 205 37 74 chr17 1174646 1174812 -84263668 - LTR39 LTR ERV1 0 783 623 2149 77 40 3 chr17 1174812 1175110 -84263370 - AluY SINE Alu -2 309 1 592 205 37 74 chr17 1175110 1175133 -84263347 - LTR39 LTR ERV1 -160 623 601 1088 174 59 41 chr17 1175261 1175531 -84262949 - LTR39 LTR ERV1 -508 275 1 273 57 0 135 chr17 1176524 1176665 -84261815 + (CCCCCT)n Simple_repeat Simple_repeat 2 123 0 536 110 0 94 chr17 1176679 1176870 -84261610 + (CCCCCT)n Simple_repeat Simple_repeat 2 174 0 216 217 0 33 chr17 1176882 1176942 -84261538 + C-rich Low_complexity Low_complexity 3 60 0 218 281 0 0 chr17 1179262 1179319 -84259161 - MIR SINE MIR -111 97 41 541 327 28 28 chr17 1180004 1180221 -84258259 + MIR SINE MIR 43 259 -3 1571 168 23 52 chr17 1180221 1180530 -84257950 + AluJb SINE Alu 1 300 -12 1687 181 87 0 chr17 1180628 1180938 -84257542 + MER1B DNA MER1_type 1 337 0 467 243 44 29 chr17 1181123 1181259 -84257221 - MIR3 SINE MIR -32 176 39 2287 85 0 0 chr17 1181259 1181553 -84256927 - AluY SINE Alu -16 295 2 2606 43 0 0 chr17 1181565 1181870 -84256610 - AluY SINE Alu -6 305 1 183 309 149 75 chr17 1183031 1183219 -84255261 - L2 LINE L2 -29 3284 3083 335 308 157 0 chr17 1183464 1183623 -84254857 + MIR SINE MIR 17 200 -62 25 0 0 0 chr17 1183787 1183812 -84254668 + GC_rich Low_complexity Low_complexity 1 25 0 1730 160 17 10 chr17 1186211 1186505 -84251975 - AluJb SINE Alu -11 301 6 1624 174 26 16 chr17 1186522 1186826 -84251654 - AluJb SINE Alu -5 307 1 326 245 47 9 chr17 1187360 1187466 -84251014 + Charlie8 DNA MER1_type 91 200 -2217 2156 110 10 0 chr17 1187857 1188157 -84250323 + AluSp SINE Alu 1 303 -10 1208 97 0 0 chr17 1188158 1188312 -84250168 + AluSg/x SINE Alu 135 288 -24 312 275 101 9 chr17 1188321 1188430 -84250050 + MER5A DNA MER1_type 71 189 0 2107 134 0 0 chr17 1188605 1188910 -84249570 - AluSx SINE Alu -7 305 1 2038 143 0 3 chr17 1188985 1189292 -84249188 + AluJo SINE Alu 1 306 -6 1228 140 0 0 chr17 1189293 1189471 -84249009 + AluSg/x SINE Alu 124 301 -9 207 130 74 0 chr17 1189472 1189526 -84248954 + (TA)n Simple_repeat Simple_repeat 1 58 0 1232 162 5 5 chr17 1189580 1189796 -84248684 - AluSg/x SINE Alu -12 300 85 1213 161 71 36 chr17 1189797 1190077 -84248403 - AluJo SINE Alu -22 290 1 1691 149 0 70 chr17 1190088 1190404 -84248076 - AluJb SINE Alu -18 294 1 21 0 0 0 chr17 1190810 1190831 -84247649 + GC_rich Low_complexity Low_complexity 1 21 0 251 294 69 10 chr17 1193042 1193144 -84245336 + MIR SINE MIR 112 219 -43 26 64 0 0 chr17 1193278 1193325 -84245155 + AT_rich Low_complexity Low_complexity 1 47 0 479 111 49 0 chr17 1193358 1193439 -84245041 - AluY SINE Alu -27 284 200 23 0 0 0 chr17 1193663 1193686 -84244794 + GC_rich Low_complexity Low_complexity 1 23 0 31 76 0 0 chr17 1195015 1195081 -84243399 + GC_rich Low_complexity Low_complexity 1 66 0 28 48 0 0 chr17 1195865 1195907 -84242573 + GC_rich Low_complexity Low_complexity 1 42 0 200 292 0 31 chr17 1196627 1196723 -84241757 + C-rich Low_complexity Low_complexity 3 95 0 27 62 0 0 chr17 1197041 1197089 -84241391 + GC_rich Low_complexity Low_complexity 1 48 0 1873 181 0 3 chr17 1199809 1200113 -84238367 + AluJb SINE Alu 6 308 -4 23 0 0 0 chr17 1200256 1200279 -84238201 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr17 1200296 1200342 -84238138 + (TAGG)n Simple_repeat Simple_repeat 4 48 0 2123 100 13 3 chr17 1200362 1200661 -84237819 - AluSq SINE Alu -11 302 1 517 143 22 22 chr17 1200661 1200752 -84237728 - AluSg/x SINE Alu -7 302 212 454 346 64 40 chr17 1201215 1201486 -84236994 + L1MC4a LINE L1 5656 5838 -283 2576 39 3 3 chr17 1201487 1201797 -84236683 + AluYb8 SINE Alu 1 310 -8 429 218 58 11 chr17 1201811 1201985 -84236495 + L1MB7 LINE L1 4378 4559 -1587 315 254 10 62 chr17 1202043 1202195 -84236285 + L1MB7 LINE L1 4976 5093 -1053 1801 78 12 4 chr17 1202277 1202522 -84235958 + AluSg SINE Alu 44 290 -20 537 161 102 8 chr17 1202742 1202860 -84235620 - MER5A DNA MER1_type -33 156 28 283 182 0 0 chr17 1202887 1202900 -84235580 + MER3 DNA MER1_type 36 48 -161 674 210 114 0 chr17 1202900 1203067 -84235413 - MER3 DNA MER1_type -1 208 23 266 272 201 65 chr17 1203130 1203303 -84235177 + L3 LINE CR1 1188 1336 -241 1718 169 10 14 chr17 1203303 1203598 -84234882 - AluJo SINE Alu -18 294 1 266 272 201 65 chr17 1203598 1203762 -84234718 + L3 LINE CR1 1336 1571 -6 574 189 66 41 chr17 1203886 1204008 -84234472 - FLAM_A SINE Alu -6 136 12 588 166 134 16 chr17 1204031 1204218 -84234262 + L1MB7 LINE L1 5083 5291 -855 859 104 17 0 chr17 1204218 1204333 -84234147 + FLAM_C SINE Alu 1 117 -16 201 39 0 0 chr17 1204376 1204402 -84234078 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3889 150 36 31 chr17 1204402 1204457 -84234023 + L1MB7 LINE L1 5275 5328 -856 2444 64 0 13 chr17 1204457 1204768 -84233712 + AluSp SINE Alu 1 307 -6 3889 150 36 31 chr17 1204768 1205617 -84232863 + L1MB7 LINE L1 5328 6184 0 387 163 12 25 chr17 1205710 1205790 -84232690 - L1MA10 LINE L1 0 6334 6256 1193 202 4 16 chr17 1205798 1205905 -84232575 - AluJb SINE Alu -67 245 138 2248 92 0 25 chr17 1205905 1206222 -84232258 - AluSq SINE Alu -4 309 1 1193 202 4 16 chr17 1206222 1206362 -84232118 - AluJb SINE Alu -174 138 1 628 301 8 25 chr17 1206432 1206668 -84231812 - L1MEd LINE L1 -5424 695 464 396 313 57 83 chr17 1206689 1206957 -84231523 - L1MEd LINE L1 -5776 343 85 1510 147 41 57 chr17 1206957 1207271 -84231209 - AluSx SINE Alu -3 309 1 396 313 57 83 chr17 1207271 1207353 -84231127 - L1MEd LINE L1 -6034 85 2 253 108 0 0 chr17 1207392 1207429 -84231051 + Alu SINE Alu 5 41 -261 577 118 11 0 chr17 1207429 1207522 -84230958 + AluSg/x SINE Alu 215 308 -4 1613 155 13 79 chr17 1208404 1208721 -84229759 - AluSx SINE Alu -16 296 1 335 226 9 70 chr17 1208749 1208864 -84229616 - MIR SINE MIR -50 212 105 2180 93 0 0 chr17 1208976 1209255 -84229225 + AluSx SINE Alu 11 289 -23 743 203 0 0 chr17 1209314 1209437 -84229043 + FLAM_A SINE Alu 4 126 -7 3687 141 32 71 chr17 1209531 1209766 -84228714 + L1MB3 LINE L1 5374 5617 -566 1840 131 11 3 chr17 1209766 1210075 -84228405 + AluJb SINE Alu 1 311 0 3687 141 32 71 chr17 1210075 1210432 -84228048 + L1MB3 LINE L1 5617 5986 -197 1942 159 0 0 chr17 1210432 1210728 -84227752 + AluSx SINE Alu 1 296 -16 3687 141 32 71 chr17 1210728 1210923 -84227557 + L1MB3 LINE L1 5986 6131 -52 2302 101 0 0 chr17 1210923 1211230 -84227250 + AluSx SINE Alu 1 307 -5 3687 141 32 71 chr17 1211230 1211282 -84227198 + L1MB3 LINE L1 6131 6183 0 1950 155 9 40 chr17 1211878 1212226 -84226254 + MER1B DNA MER1_type 1 337 0 3272 202 67 23 chr17 1214250 1214938 -84223542 + L1ME1 LINE L1 5191 5931 -235 1131 90 229 5 chr17 1214938 1215126 -84223354 - MER30 DNA MER1_type 0 230 1 3272 202 67 23 chr17 1215126 1215352 -84223128 + L1ME1 LINE L1 5931 6146 -20 1567 172 46 4 chr17 1216622 1216883 -84221597 + AluJb SINE Alu 23 294 -18 2162 107 0 30 chr17 1216903 1217202 -84221278 - AluSx SINE Alu -15 297 8 25 0 0 0 chr17 1217886 1217911 -84220569 + AT_rich Low_complexity Low_complexity 1 25 0 2273 108 3 13 chr17 1217955 1218270 -84220210 + AluSq SINE Alu 1 312 -1 1955 156 7 3 chr17 1218491 1218792 -84219688 - AluJb SINE Alu -1 311 10 1283 164 5 0 chr17 1220483 1220684 -84217796 + AluJo SINE Alu 1 202 -110 2926 208 45 46 chr17 1220713 1220986 -84217494 + L1ME2 LINE L1 5152 5424 -740 2101 120 7 29 chr17 1220986 1221294 -84217186 + AluSx SINE Alu 1 301 -11 2926 208 45 46 chr17 1221294 1222024 -84216456 + L1ME2 LINE L1 5424 6148 -16 672 159 24 0 chr17 1222209 1222335 -84216145 + AluJb SINE Alu 2 130 -182 713 276 150 46 chr17 1222347 1222499 -84215981 - L1ME4a LINE L1 -6 6115 5980 234 0 0 0 chr17 1222499 1222525 -84215955 + (CA)n Simple_repeat Simple_repeat 2 27 0 713 276 150 46 chr17 1222525 1222579 -84215901 - L1ME4a LINE L1 -141 5980 5933 1832 190 3 0 chr17 1222579 1222889 -84215591 - AluJb SINE Alu -1 311 1 713 276 150 46 chr17 1222889 1223120 -84215360 - L1ME4a LINE L1 -188 5933 5631 1651 244 113 43 chr17 1223695 1224396 -84214084 + L2 LINE L2 2305 3067 -246 188 319 0 0 chr17 1224449 1224496 -84213984 - L2 LINE L2 -16 3256 3210 635 164 9 9 chr17 1224556 1224672 -84213808 - AluJ SINE Alu -16 296 181 633 91 20 20 chr17 1224675 1224774 -84213706 - AluSq SINE Alu -93 220 122 860 91 80 148 chr17 1224774 1224836 -84213644 - AluJ SINE Alu -137 175 110 2258 89 4 0 chr17 1224836 1225150 -84213330 + AluSg SINE Alu 1 315 0 860 91 80 148 chr17 1225150 1225262 -84213218 - AluJ SINE Alu -202 110 12 182 272 35 70 chr17 1225263 1225377 -84213103 - MIR SINE MIR -60 148 39 2090 114 37 23 chr17 1225405 1225704 -84212776 + AluSx SINE Alu 7 309 -3 1509 208 27 3 chr17 1225714 1226012 -84212468 + AluJo SINE Alu 1 305 -7 331 329 118 54 chr17 1226392 1226705 -84211775 - L1MEd LINE L1 -4922 1197 865 2176 105 3 25 chr17 1226724 1227038 -84211442 - AluSx SINE Alu -5 307 1 1641 215 0 3 chr17 1227122 1227415 -84211065 + AluJb SINE Alu 1 292 -20 2032 134 3 7 chr17 1227643 1227950 -84210530 - AluSx SINE Alu -6 306 1 1749 146 0 11 chr17 1227951 1228226 -84210254 - AluJo SINE Alu -6 306 35 586 138 107 16 chr17 1228277 1228436 -84210044 + MER46A DNA MER2_type 5 227 -9 474 218 9 36 chr17 1228814 1228924 -84209556 + MLT1D LTR MaLR 1 107 -398 2303 114 0 0 chr17 1228926 1229225 -84209255 - AluSx SINE Alu -13 299 1 1234 112 0 51 chr17 1229232 1229428 -84209052 - AluSg/x SINE Alu 0 312 127 2227 105 3 20 chr17 1229445 1229741 -84208739 - AluSq SINE Alu -18 295 5 1691 146 4 0 chr17 1229809 1230056 -84208424 - AluSx SINE Alu -21 291 44 612 271 38 55 chr17 1230104 1230396 -84208084 + L1M4 LINE L1 4076 4362 -1784 1814 165 28 3 chr17 1230401 1230692 -84207788 + AluJb SINE Alu 2 299 -13 1864 184 0 0 chr17 1230748 1231047 -84207433 + AluJo SINE Alu 1 299 -13 661 224 0 8 chr17 1231197 1231331 -84207149 - FLAM_A SINE Alu 0 133 1 2228 89 6 25 chr17 1231336 1231651 -84206829 - AluY SINE Alu -2 309 1 384 243 28 19 chr17 1231655 1231762 -84206718 - MIR SINE MIR -61 147 40 985 252 20 20 chr17 1233587 1233837 -84204643 - MIR SINE MIR -1 261 12 297 89 0 0 chr17 1235846 1235891 -84202589 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 100 0 0 chr17 1235975 1236005 -84202475 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2138 130 10 0 chr17 1240618 1240925 -84197555 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1242381 1242696 -84195784 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1242698 1242957 -84195523 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1243469 1243626 -84194854 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1243628 1243933 -84194547 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1243933 1244152 -84194328 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1244156 1244216 -84194264 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1244417 1244486 -84193994 - AluJ SINE Alu -39 263 197 737 154 46 23 chr17 1244491 1244621 -84193859 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1244965 1245253 -84193227 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1245260 1245398 -84193082 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1246177 1246271 -84192209 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1246775 1246927 -84191553 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1246927 1247223 -84191257 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1247223 1247360 -84191120 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1247411 1247471 -84191009 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1247471 1247499 -84190981 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1247699 1247803 -84190677 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1247859 1248150 -84190330 - AluJb SINE Alu -3 309 1 509 258 151 82 chr17 1248228 1248694 -84189786 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1248694 1249000 -84189480 - AluJb SINE Alu -12 300 1 509 258 151 82 chr17 1249000 1249071 -84189409 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1249186 1249339 -84189141 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1249344 1249645 -84188835 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1250526 1250585 -84187895 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1250585 1250744 -84187736 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1250744 1251051 -84187429 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1251051 1251188 -84187292 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1251297 1251561 -84186919 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1251565 1251665 -84186815 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1251823 1252116 -84186364 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1252381 1252568 -84185912 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1252905 1253075 -84185405 - L1MA7 LINE L1 0 6291 6122 1790 155 3 48 chr17 1253075 1253384 -84185096 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1253384 1253881 -84184599 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1254665 1254964 -84183516 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1254964 1255109 -84183371 - AluSq/x SINE Alu -168 145 1 238 294 327 20 chr17 1255420 1255573 -84182907 - MIR SINE MIR -62 200 1 826 178 20 13 chr17 1255639 1255791 -84182689 - AluJb SINE Alu -19 293 141 181 376 47 0 chr17 1256433 1256518 -84181962 + L3 LINE CR1 1485 1573 -4 666 197 0 0 chr17 1263638 1263785 -84174695 + (TG)n Simple_repeat Simple_repeat 1 147 0 369 0 0 0 chr17 1264045 1264086 -84174394 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 250 0 0 chr17 1265053 1265097 -84173383 + G-rich Low_complexity Low_complexity 3 46 0 195 42 0 0 chr17 1266762 1266786 -84171694 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1435 143 0 5 chr17 1266791 1267014 -84171466 + AluJb SINE Alu 89 310 -2 256 244 25 50 chr17 1267200 1267319 -84171161 + MER113 DNA MER1_type? 5 120 -401 221 222 19 0 chr17 1270277 1270331 -84168149 + MIR SINE MIR 196 250 -12 2264 100 0 0 chr17 1270458 1270773 -84167707 - AluSx SINE Alu 0 316 2 216 0 0 0 chr17 1270777 1270801 -84167679 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2501 80 0 0 chr17 1270819 1271120 -84167360 + AluSg SINE Alu 1 301 -9 365 61 0 0 chr17 1271138 1271187 -84167293 + AluSq/x SINE Alu 87 135 -168 2076 129 0 14 chr17 1271187 1271481 -84166999 + AluSq SINE Alu 1 290 -23 1052 143 0 0 chr17 1271485 1271632 -84166848 - FRAM SINE Alu -30 146 1 243 321 21 57 chr17 1274765 1274958 -84163522 - L2 LINE L2 -213 3059 2874 771 181 94 7 chr17 1275072 1275221 -84163259 - FAM SINE Alu -13 162 1 354 211 26 0 chr17 1275221 1275297 -84163183 - MIR SINE MIR -112 150 73 194 357 29 14 chr17 1275304 1275444 -84163036 - L2 LINE L2 -452 2862 2721 232 315 110 0 chr17 1275506 1275579 -84162901 + MER91C DNA MER1_type 30 110 -30 2151 121 28 0 chr17 1275771 1276061 -84162419 - AluSq SINE Alu -15 298 1 2330 102 0 0 chr17 1276360 1276653 -84161827 - AluSx SINE Alu -19 293 1 1722 101 93 12 chr17 1276775 1277022 -84161458 + AluSc SINE Alu 34 300 -9 2341 89 0 0 chr17 1277182 1277513 -84160967 + AluSx SINE Alu 1 331 0 2104 141 3 0 chr17 1277532 1277837 -84160643 + AluSx SINE Alu 7 312 0 729 252 19 27 chr17 1277911 1278016 -84160464 - MIR SINE MIR -12 250 146 2474 88 0 3 chr17 1278016 1278324 -84160156 - AluSg SINE Alu -3 307 1 729 252 19 27 chr17 1278324 1278435 -84160045 - MIR SINE MIR -116 146 40 985 252 20 20 chr17 1280259 1280509 -84157971 - MIR SINE MIR -1 261 12 315 85 0 0 chr17 1282518 1282565 -84155915 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 100 0 0 chr17 1282649 1282679 -84155801 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2211 133 3 0 chr17 1287291 1287600 -84150880 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1289056 1289371 -84149109 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1289373 1289632 -84148848 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1290144 1290301 -84148179 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1290303 1290608 -84147872 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1290608 1290827 -84147653 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1290831 1290891 -84147589 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1291092 1291161 -84147319 - AluJ SINE Alu -39 263 197 743 155 47 16 chr17 1291166 1291295 -84147185 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1291639 1291927 -84146553 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1291934 1292072 -84146408 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1292851 1292945 -84145535 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1293449 1293601 -84144879 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1293601 1293897 -84144583 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1293897 1294034 -84144446 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1294085 1294145 -84144335 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1294145 1294173 -84144307 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1294373 1294477 -84144003 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1294533 1294824 -84143656 - AluJb SINE Alu -3 309 1 513 255 151 82 chr17 1294902 1295368 -84143112 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1295368 1295674 -84142806 - AluJb SINE Alu -12 300 1 513 255 151 82 chr17 1295674 1295745 -84142735 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1295860 1296013 -84142467 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1296018 1296319 -84142161 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1297200 1297259 -84141221 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1297259 1297418 -84141062 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1297418 1297725 -84140755 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1297725 1297862 -84140618 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1297971 1298235 -84140245 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1298239 1298339 -84140141 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1298497 1298790 -84139690 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1299056 1299243 -84139237 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1299580 1299750 -84138730 - L1MA7 LINE L1 0 6291 6122 1759 158 3 52 chr17 1299750 1300060 -84138420 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1300060 1300557 -84137923 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1301341 1301640 -84136840 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1301640 1301785 -84136695 - AluSq/x SINE Alu -167 145 1 238 294 327 20 chr17 1302095 1302248 -84136232 - MIR SINE MIR -62 200 1 1947 146 3 33 chr17 1302314 1302616 -84135864 - AluJb SINE Alu -19 293 1 2315 85 11 0 chr17 1302653 1302961 -84135519 + AluSq SINE Alu 1 311 0 1703 128 3 104 chr17 1304215 1304543 -84133937 - AluYa5 SINE Alu -14 297 3 192 40 0 0 chr17 1305453 1305478 -84133002 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2027 135 0 44 chr17 1305725 1306043 -84132437 + AluSx SINE Alu 2 305 -7 1773 152 0 14 chr17 1306048 1306325 -84132155 + AluSx SINE Alu 1 273 -39 336 226 39 10 chr17 1306329 1306431 -84132049 - MIR SINE MIR -48 214 110 2182 126 0 0 chr17 1306660 1306953 -84131527 - AluSx SINE Alu -19 293 1 2101 133 33 0 chr17 1307199 1307500 -84130980 + AluSx SINE Alu 1 311 -1 696 255 115 36 chr17 1308487 1308765 -84129715 - L2 LINE L2 -8 3305 3006 1937 123 37 0 chr17 1308824 1309093 -84129387 - AluJo SINE Alu -33 279 1 2455 55 0 14 chr17 1309612 1309957 -84128523 + AluY SINE Alu 1 341 0 2198 139 0 0 chr17 1310141 1310443 -84128037 - AluJb SINE Alu -10 302 1 1554 157 16 72 chr17 1310443 1310761 -84127719 - AluJb SINE Alu -12 300 1 2344 93 0 7 chr17 1311371 1311671 -84126809 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr17 1311772 1311797 -84126683 + AT_rich Low_complexity Low_complexity 1 25 0 2053 96 8 0 chr17 1312032 1312292 -84126188 + AluSq SINE Alu 1 262 -51 917 26 17 0 chr17 1312292 1312407 -84126073 + (TAAAA)n Simple_repeat Simple_repeat 2 118 0 355 290 22 0 chr17 1312874 1313012 -84125468 + L1ME LINE L1 4771 4911 -1235 1384 192 73 8 chr17 1313146 1313407 -84125073 - AluJo SINE Alu -34 278 1 709 199 18 60 chr17 1313409 1313464 -84125016 + L1ME LINE L1 5087 5143 -1021 1670 181 3 29 chr17 1313464 1313779 -84124701 - AluJo SINE Alu -5 307 1 709 199 18 60 chr17 1313779 1313842 -84124638 + L1ME LINE L1 5143 5207 -957 2198 85 0 75 chr17 1313842 1314161 -84124319 + AluSx SINE Alu 1 295 -17 709 199 18 60 chr17 1314161 1314417 -84124063 + L1ME LINE L1 5207 5442 -722 1023 128 0 0 chr17 1314497 1314638 -84123842 - AluJb SINE Alu -14 298 158 1340 237 101 22 chr17 1314654 1315160 -84123320 + L1ME2 LINE L1 4084 4629 -1517 506 233 24 99 chr17 1315162 1315361 -84123119 + L1ME2 LINE L1 4796 5008 -1138 1881 175 14 0 chr17 1315361 1315653 -84122827 + AluJb SINE Alu 1 296 -16 2207 115 0 3 chr17 1315660 1315948 -84122532 + AluSx SINE Alu 5 291 -21 506 233 24 99 chr17 1315948 1315993 -84122487 + L1ME2 LINE L1 5014 5029 -1117 1290 186 90 21 chr17 1315999 1316289 -84122191 - AluJb SINE Alu -2 310 1 1991 114 30 30 chr17 1316298 1316458 -84122022 - AluSx SINE Alu -14 298 136 2400 94 0 0 chr17 1316458 1316755 -84121725 - AluY SINE Alu -14 297 1 1991 114 30 30 chr17 1316755 1316892 -84121588 - AluSx SINE Alu -175 137 1 2051 127 0 44 chr17 1316897 1317065 -84121415 - AluSx SINE Alu -11 301 152 2357 81 0 3 chr17 1317065 1317360 -84121120 - AluY SINE Alu -17 294 1 2051 127 0 44 chr17 1317360 1317506 -84120974 - AluSx SINE Alu -160 152 1 738 209 177 50 chr17 1317571 1317844 -84120636 + L1ME2 LINE L1 5107 5344 -820 1595 188 31 10 chr17 1317844 1318132 -84120348 + AluJo SINE Alu 1 294 -18 738 209 177 50 chr17 1318132 1318291 -84120189 + L1ME2 LINE L1 5344 5586 -578 1126 144 51 0 chr17 1318297 1318492 -84119988 + MER30 DNA MER1_type 26 230 0 1660 196 50 30 chr17 1318502 1318900 -84119580 + L1ME2 LINE L1 5587 5992 -172 335 274 0 32 chr17 1318914 1319009 -84119471 - L1MC4 LINE L1 -1334 6708 6617 936 151 81 29 chr17 1319022 1319194 -84119286 - AluJb SINE Alu -47 265 85 189 0 0 0 chr17 1319194 1319215 -84119265 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1910 121 4 4 chr17 1319220 1319477 -84119003 - AluSx SINE Alu -37 275 19 2527 209 43 34 chr17 1322869 1323031 -84115449 + L1M4 LINE L1 4498 4657 -1489 2129 145 0 0 chr17 1323031 1323335 -84115145 + AluSx SINE Alu 1 304 -8 2527 209 43 34 chr17 1323335 1323807 -84114673 + L1M4 LINE L1 4657 5141 -1005 1962 139 34 0 chr17 1323807 1324102 -84114378 + AluSx SINE Alu 1 305 -7 2527 209 43 34 chr17 1324102 1324140 -84114340 + L1M4 LINE L1 5141 5177 -969 563 193 0 35 chr17 1324140 1324254 -84114226 + AluJb SINE Alu 11 120 -192 408 181 0 0 chr17 1324254 1324337 -84114143 + (CA)n Simple_repeat Simple_repeat 1 83 0 1232 150 0 0 chr17 1324359 1324539 -84113941 + AluJb SINE Alu 132 311 -1 1231 120 89 4 chr17 1324539 1324764 -84113716 + L1MB4 LINE L1 5904 6147 -33 330 22 0 0 chr17 1325648 1325694 -84112786 + L1MB3 LINE L1 6138 6183 0 504 279 8 0 chr17 1325695 1325817 -84112663 - MER3 DNA MER1_type -81 128 6 1812 95 26 0 chr17 1325975 1326273 -84112207 + AluSx SINE Alu 63 366 0 1406 181 102 11 chr17 1326438 1326703 -84111777 + AluJb SINE Alu 1 289 -23 282 333 42 42 chr17 1326712 1326884 -84111596 + L1M4 LINE L1 3852 4026 -2120 2269 124 0 0 chr17 1326884 1327190 -84111290 + AluSx SINE Alu 1 306 -6 282 333 42 42 chr17 1327190 1327278 -84111202 + L1M4 LINE L1 4025 4112 -2034 2683 40 0 3 chr17 1327346 1327650 -84110830 + AluYb8 SINE Alu 5 307 -11 465 213 69 23 chr17 1327664 1327838 -84110642 + L1M4 LINE L1 4378 4559 -1587 1893 74 12 4 chr17 1328130 1328373 -84110107 + AluSg SINE Alu 44 288 -22 304 206 32 90 chr17 1328491 1328646 -84109834 - L1MC5 LINE L1 0 7961 7816 2162 107 0 20 chr17 1328661 1328959 -84109521 - AluSg SINE Alu -18 292 1 2044 125 0 38 chr17 1329138 1329451 -84109029 + AluSx SINE Alu 1 301 -11 517 192 0 0 chr17 1329452 1329530 -84108950 - AluJ/FLAM SINE Alu -232 80 3 560 252 19 44 chr17 1329544 1329703 -84108777 + L2 LINE L2 3156 3310 -3 1118 170 58 0 chr17 1330157 1330345 -84108135 - AluJb SINE Alu -17 295 97 1982 125 4 0 chr17 1330345 1330617 -84107863 + AluSx SINE Alu 24 296 -16 258 260 78 0 chr17 1330818 1330895 -84107585 + MLT1J LTR MaLR 5 87 -424 869 205 0 6 chr17 1330909 1331065 -84107415 - FRAM SINE Alu -25 151 1 456 269 156 48 chr17 1331065 1331418 -84107062 + MLT1J LTR MaLR 75 465 -46 309 300 133 40 chr17 1331445 1331524 -84106956 + MIR SINE MIR 59 129 -133 2007 105 14 14 chr17 1331524 1331809 -84106671 + AluSg SINE Alu 26 310 0 309 300 133 40 chr17 1331809 1331879 -84106601 + MIR SINE MIR 129 222 -40 2309 120 0 0 chr17 1332232 1332540 -84105940 - AluSx SINE Alu -4 308 1 1569 156 40 13 chr17 1332546 1332848 -84105632 - L1MA7 LINE L1 0 6291 5982 762 181 12 6 chr17 1332894 1333054 -84105426 + MER3 DNA MER1_type 5 165 -44 1681 184 25 4 chr17 1333065 1333343 -84105137 - AluJb SINE Alu -28 284 1 426 20 0 0 chr17 1333343 1333357 -84105123 + (TG)n Simple_repeat Simple_repeat 1 65 0 426 20 0 0 chr17 1333357 1333408 -84105072 + (TG)n Simple_repeat Simple_repeat 2 52 0 1961 101 75 0 chr17 1333435 1333703 -84104777 - AluSx SINE Alu -24 288 1 1896 135 3 30 chr17 1334237 1334534 -84103946 + AluJb SINE Alu 1 289 -23 2216 108 7 0 chr17 1336779 1337075 -84101405 - AluSx SINE Alu -9 303 6 2202 107 7 0 chr17 1337094 1337384 -84101096 - AluSx SINE Alu -20 292 1 21 36 0 0 chr17 1337659 1337687 -84100793 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr17 1339323 1339349 -84099131 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 685 188 9 0 chr17 1339482 1339594 -84098886 - MER81 DNA DNA -1 113 1 234 0 0 0 chr17 1339781 1339807 -84098673 + (T)n Simple_repeat Simple_repeat 1 26 0 820 167 0 0 chr17 1340052 1340184 -84098296 + FLAM_C SINE Alu 1 132 -1 2255 107 13 0 chr17 1341185 1341485 -84096995 - AluSq SINE Alu -9 304 1 2294 88 10 0 chr17 1341497 1341791 -84096689 - AluSx SINE Alu -15 297 1 811 221 80 6 chr17 1341848 1342011 -84096469 + FAM SINE Alu 1 175 0 426 272 47 67 chr17 1342036 1342290 -84096190 - L1ME LINE L1 -370 5751 5503 2635 31 0 0 chr17 1342331 1342625 -84095855 - AluY SINE Alu -17 294 1 1453 179 4 12 chr17 1343084 1343335 -84095145 - AluJb SINE Alu -63 249 1 2335 111 3 3 chr17 1343966 1344273 -84094207 + AluSq SINE Alu 1 307 -6 753 122 16 0 chr17 1344273 1344396 -84094084 - L1PB1 LINE L1 -285 5866 5742 394 296 53 4 chr17 1346143 1346302 -84092178 + L1MC4a LINE L1 5500 5662 -580 566 240 128 25 chr17 1346318 1346560 -84091920 + L1MC4a LINE L1 5712 5978 -1830 1007 83 0 0 chr17 1346564 1346685 -84091795 + AluY SINE Alu 1 121 -190 182 61 0 30 chr17 1346685 1346718 -84091762 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1869 186 3 0 chr17 1346722 1347028 -84091452 + AluJo SINE Alu 1 307 -5 1562 151 4 12 chr17 1354886 1355137 -84083343 + AluJo SINE Alu 30 278 -34 290 197 26 0 chr17 1355140 1355216 -84083264 + GA-rich Low_complexity Low_complexity 3 80 0 1242 211 48 0 chr17 1355360 1355630 -84082850 - MER58B DNA MER1_type -2 339 57 423 0 0 0 chr17 1355661 1355708 -84082772 + (CA)n Simple_repeat Simple_repeat 2 48 0 184 121 45 45 chr17 1355746 1355812 -84082668 + (CAGG)n Simple_repeat Simple_repeat 2 67 0 254 291 8 8 chr17 1355867 1355994 -84082486 + (CA)n Simple_repeat Simple_repeat 1 127 0 1861 169 0 3 chr17 1355995 1356290 -84082190 + AluSx SINE Alu 1 294 -18 2306 118 3 0 chr17 1356291 1356596 -84081884 + AluSq SINE Alu 1 306 -7 2354 98 13 7 chr17 1356596 1356902 -84081578 + AluSx SINE Alu 1 308 -4 207 284 11 21 chr17 1356981 1357076 -84081404 + (CATA)n Simple_repeat Simple_repeat 1 94 0 212 254 11 79 chr17 1357127 1357304 -84081176 + (CAGA)n Simple_repeat Simple_repeat 4 168 0 * 236 234 0 65 chr17 1357203 1357310 -84081170 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 323 161 151 21 chr17 1357326 1357419 -84081061 + L1MB3 LINE L1 6079 6183 0 278 333 0 33 chr17 1357574 1357727 -84080753 + G-rich Low_complexity Low_complexity 2 149 0 1810 125 3 97 chr17 1357859 1358188 -84080292 + AluJb SINE Alu 1 298 -14 2244 188 41 46 chr17 1359057 1359641 -84078839 + L1MC4 LINE L1 7462 8042 0 329 323 39 8 chr17 1360500 1360627 -84077853 + MIR SINE MIR 117 247 -15 318 48 0 0 chr17 1360859 1360901 -84077579 + 5S rRNA rRNA 1 42 -79 313 162 118 0 chr17 1361002 1361070 -84077410 + MIR SINE MIR 187 262 0 239 331 74 33 chr17 1362940 1363061 -84075419 - L2 LINE L2 -14 3258 3133 203 241 0 19 chr17 1364029 1364083 -84074397 + G-rich Low_complexity Low_complexity 5 57 0 2075 160 108 5 chr17 1364968 1365356 -84073124 + MSTA LTR MaLR 1 428 0 1399 142 158 24 chr17 1365751 1366005 -84072475 - AluSg1 SINE Alu -21 288 1 266 367 51 25 chr17 1366124 1366320 -84072160 - L2 LINE L2 -493 2821 2621 815 144 0 30 chr17 1366480 1366601 -84071879 + FLAM_C SINE Alu 1 119 -193 217 86 0 0 chr17 1366601 1366636 -84071844 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 194 326 0 0 chr17 1367389 1367435 -84071045 + L2 LINE L2 3140 3185 -87 455 238 90 13 chr17 1367609 1367771 -84070709 - MIR SINE MIR -56 206 34 630 244 34 118 chr17 1367927 1368053 -84070427 + L1MD2 LINE L1 4358 4493 -1653 2134 100 19 32 chr17 1368053 1368362 -84070118 + AluSx SINE Alu 1 305 -7 630 244 34 118 chr17 1368362 1368649 -84069831 + L1MD2 LINE L1 4493 4736 -1410 636 211 55 0 chr17 1368665 1368793 -84069687 + AluJo SINE Alu 2 136 -176 5296 187 25 40 chr17 1368796 1369196 -84069284 + L1MD2 LINE L1 4889 5293 -1066 1794 168 16 10 chr17 1369196 1369505 -84068975 + AluJb SINE Alu 1 311 -1 5296 187 25 40 chr17 1369505 1370593 -84067887 + L1MD2 LINE L1 5293 6349 -10 252 111 0 0 chr17 1370849 1370894 -84067586 + (A)n Simple_repeat Simple_repeat 1 45 0 505 139 0 40 chr17 1371266 1371507 -84066973 + AluJ SINE Alu 2 312 0 21 36 0 0 chr17 1371507 1371535 -84066945 + AT_rich Low_complexity Low_complexity 1 28 0 2048 123 7 10 chr17 1371538 1371831 -84066649 + AluSx SINE Alu 1 292 -20 2205 123 3 0 chr17 1371833 1372133 -84066347 - AluSx SINE Alu -9 303 3 1260 73 6 0 chr17 1372277 1372441 -84066039 - L1PA5 LINE L1 -4 6150 5986 825 169 0 0 chr17 1372456 1372580 -84065900 - FLAM_C SINE Alu -19 124 1 759 150 0 18 chr17 1372624 1372842 -84065638 - AluJb SINE Alu -15 297 2 1927 184 147 42 chr17 1372948 1373330 -84065150 + L1ME1 LINE L1 5143 5484 -682 1689 155 58 0 chr17 1373330 1373608 -84064872 + AluSx SINE Alu 5 298 -14 1927 184 147 42 chr17 1373608 1373656 -84064824 + L1ME1 LINE L1 5484 5526 -640 2263 114 0 0 chr17 1373656 1373953 -84064527 + AluSx SINE Alu 1 297 -15 1927 184 147 42 chr17 1373953 1374171 -84064309 + L1ME1 LINE L1 5526 5828 -338 1640 186 3 14 chr17 1374194 1374484 -84063996 + AluJo SINE Alu 14 300 -12 353 300 50 50 chr17 1374584 1374804 -84063676 - MIR SINE MIR -19 243 24 975 182 0 13 chr17 1375886 1376045 -84062435 - AluJb SINE Alu -22 290 134 1681 198 3 0 chr17 1376596 1376879 -84061601 + AluSx SINE Alu 1 284 -28 2117 105 0 51 chr17 1376984 1377299 -84061181 - AluSx SINE Alu -13 299 1 201 167 0 0 chr17 1377692 1377728 -84060752 + (TA)n Simple_repeat Simple_repeat 1 36 0 1931 166 0 0 chr17 1377728 1378023 -84060457 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 1378122 1378152 -84060328 + AT_rich Low_complexity Low_complexity 1 30 0 1787 147 48 27 chr17 1378217 1378510 -84059970 + AluJo SINE Alu 1 299 -13 1947 143 0 23 chr17 1378513 1378848 -84059632 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 1378856 1378899 -84059581 + AT_rich Low_complexity Low_complexity 1 43 0 1648 164 12 53 chr17 1378904 1379227 -84059253 + AluSx SINE Alu 1 310 -2 201 254 0 0 chr17 1379509 1379568 -84058912 + (TA)n Simple_repeat Simple_repeat 1 59 0 943 160 0 18 chr17 1379897 1380066 -84058414 + FRAM SINE Alu 1 166 0 200 398 42 0 chr17 1380492 1380610 -84057870 - L2 LINE L2 -4 3268 3146 1581 181 57 0 chr17 1380814 1381095 -84057385 + AluJb SINE Alu 3 299 -13 1828 128 36 43 chr17 1381123 1381287 -84057193 - AluSx SINE Alu -9 303 140 2199 101 7 3 chr17 1381287 1381574 -84056906 - AluSx SINE Alu -20 292 5 1828 128 36 43 chr17 1381574 1381714 -84056766 - AluSx SINE Alu -172 140 1 198 209 0 0 chr17 1381761 1381804 -84056676 - MIR SINE MIR 0 262 220 793 242 10 48 chr17 1381869 1382154 -84056326 + LTR16A LTR ERVL 107 434 -16 800 178 0 0 chr17 1382192 1382327 -84056153 - FLAM_A SINE Alu 0 142 8 28 0 0 0 chr17 1382671 1382699 -84055781 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 1383008 1383031 -84055449 + AT_rich Low_complexity Low_complexity 1 23 0 2502 57 0 7 chr17 1383297 1383598 -84054882 + AluY SINE Alu 1 299 -12 437 212 144 17 chr17 1384923 1385041 -84053439 + MER94 DNA DNA 1 133 -1 213 121 0 0 chr17 1387127 1387160 -84051320 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr17 1389104 1389140 -84049340 + AT_rich Low_complexity Low_complexity 1 36 0 239 218 91 18 chr17 1389168 1389333 -84049147 - L1ME4a LINE L1 -33 6088 5912 2266 97 0 7 chr17 1389644 1389954 -84048526 + AluSc SINE Alu 2 309 0 2324 66 11 0 chr17 1390182 1390469 -84048011 + AluY SINE Alu 1 290 -21 1318 160 22 9 chr17 1390691 1390922 -84047558 + L1MC1 LINE L1 6095 6328 -5 182 191 64 0 chr17 1390947 1390994 -84047486 - L2 LINE L2 -3 3310 3261 2132 128 0 0 chr17 1391017 1391329 -84047151 + AluSx SINE Alu 1 312 0 521 266 46 66 chr17 1391359 1391419 -84047061 + L1ME LINE L1 5517 5577 -585 1822 165 0 52 chr17 1391419 1391747 -84046733 + AluJo SINE Alu 1 311 -1 521 266 46 66 chr17 1391747 1391839 -84046641 + L1ME LINE L1 5577 5669 -493 1545 183 68 4 chr17 1391839 1392118 -84046362 - AluJb SINE Alu -15 297 1 521 266 46 66 chr17 1392118 1392263 -84046217 + L1ME LINE L1 5669 5800 -362 1969 133 4 0 chr17 1392263 1392533 -84045947 + AluJo SINE Alu 1 271 -41 521 266 46 66 chr17 1392533 1392552 -84045928 + L1ME LINE L1 5800 5818 -344 302 93 0 0 chr17 1392583 1392626 -84045854 + MADE1 DNA Mariner 2 44 -36 2265 132 91 5 chr17 1393070 1393464 -84045016 + MSTA LTR MaLR 1 428 0 1875 134 35 3 chr17 1393665 1393949 -84044531 - AluSx SINE Alu -19 293 1 939 269 57 61 chr17 1393972 1394652 -84043828 - L2 LINE L2 -5 3308 2625 186 43 0 0 chr17 1395831 1395854 -84042626 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 299 275 62 39 chr17 1395893 1396071 -84042409 + L1MEd LINE L1 5 186 -5933 500 289 98 48 chr17 1396289 1396626 -84041854 + L1MEd LINE L1 860 1179 -1805 324 0 0 0 chr17 1396626 1396662 -84041818 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 500 289 98 48 chr17 1396662 1397105 -84041375 + L1MEd LINE L1 1179 1598 -1386 1740 131 10 89 chr17 1397105 1397418 -84041062 + AluSx SINE Alu 1 288 -24 500 289 98 48 chr17 1397418 1397823 -84040657 + L1MEd LINE L1 1598 2123 -861 * 3578 203 45 62 chr17 1397805 1397936 -84040544 + L1ME1 LINE L1 5187 5319 -847 2147 98 4 0 chr17 1397936 1398212 -84040268 + AluSp SINE Alu 34 310 -3 2004 116 18 4 chr17 1398213 1398527 -84039953 + AluSg SINE Alu 1 318 0 2032 99 0 31 chr17 1398536 1398828 -84039652 + AluSx SINE Alu 14 296 -16 3578 203 45 62 chr17 1398828 1399660 -84038820 + L1ME1 LINE L1 5327 6162 -4 591 233 91 47 chr17 1399731 1399965 -84038515 + L1ME3A LINE L1 5708 5948 -218 2082 135 0 26 chr17 1399968 1400142 -84038338 - AluSx SINE Alu -9 303 139 2275 85 7 10 chr17 1400142 1400437 -84038043 - AluSq SINE Alu -19 294 1 2082 135 0 26 chr17 1400437 1400573 -84037907 - AluSx SINE Alu -173 139 1 228 135 0 0 chr17 1400589 1400626 -84037854 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 387 235 45 68 chr17 1400669 1400801 -84037679 + L1ME3A LINE L1 5965 6093 -77 284 276 97 48 chr17 1401402 1401547 -84036933 + MIR SINE MIR 72 223 -39 2593 80 0 0 chr17 1401814 1402154 -84036326 + AluSx SINE Alu 1 340 0 279 0 0 0 chr17 1402216 1402247 -84036233 + (A)n Simple_repeat Simple_repeat 1 31 0 2257 82 0 4 chr17 1403326 1403607 -84034873 + AluSg SINE Alu 1 280 -30 24 32 0 0 chr17 1404134 1404165 -84034315 + AT_rich Low_complexity Low_complexity 1 31 0 224 304 0 0 chr17 1404423 1404479 -84034001 - L2 LINE L2 -3 3269 3214 23 54 0 0 chr17 1406148 1406185 -84032295 + AT_rich Low_complexity Low_complexity 1 37 0 2095 111 3 3 chr17 1406185 1406473 -84032007 - AluSx SINE Alu -24 288 1 21 36 0 0 chr17 1406605 1406633 -84031847 + AT_rich Low_complexity Low_complexity 1 28 0 1104 129 6 6 chr17 1406633 1406796 -84031684 - AluSg/x SINE Alu -27 283 121 192 40 0 0 chr17 1407673 1407698 -84030782 + (GGGAA)n Simple_repeat Simple_repeat 3 27 0 459 0 0 0 chr17 1408612 1408663 -84029817 + (CA)n Simple_repeat Simple_repeat 1 51 0 2111 93 72 0 chr17 1409000 1409278 -84029202 - AluSq SINE Alu -15 298 1 22 35 0 0 chr17 1410717 1410746 -84027734 + AT_rich Low_complexity Low_complexity 1 29 0 338 174 116 12 chr17 1411307 1411393 -84027087 + L1ME4a LINE L1 5710 5804 -317 419 224 68 20 chr17 1411481 1411628 -84026852 + L1ME4a LINE L1 5944 6097 -24 25 51 0 0 chr17 1411717 1411756 -84026724 + AT_rich Low_complexity Low_complexity 1 39 0 246 273 91 53 chr17 1412406 1412538 -84025942 - MIR3 SINE MIR -1 207 71 270 195 26 52 chr17 1413158 1413235 -84025245 - L3b LINE CR1 -87 1496 1422 825 108 0 25 chr17 1413481 1413601 -84024879 - FLAM_C SINE Alu -16 117 1 898 202 106 5 chr17 1413817 1414015 -84024465 + MER20 DNA MER1_type 2 219 0 2345 67 0 57 chr17 1414141 1414456 -84024024 + AluY SINE Alu 1 297 -14 882 157 119 0 chr17 1414466 1414625 -84023855 + FAM SINE Alu 1 49 0 2089 128 3 0 chr17 1415309 1415598 -84022882 + AluSx SINE Alu 1 290 -22 2124 140 3 0 chr17 1417294 1417594 -84020886 - AluSx SINE Alu -10 302 2 2001 146 3 7 chr17 1417597 1417892 -84020588 - AluJo SINE Alu -18 294 1 478 285 39 0 chr17 1417893 1418023 -84020457 - Charlie8 DNA MER1_type -2278 139 5 2261 99 0 3 chr17 1418574 1418887 -84019593 + AluSq SINE Alu 1 312 -1 222 260 52 39 chr17 1418915 1418992 -84019488 - MIR SINE MIR -99 109 32 185 206 0 0 chr17 1419033 1419067 -84019413 + MIR SINE MIR 65 98 -164 457 231 34 0 chr17 1419125 1419242 -84019238 + L1MC4 LINE L1 7922 8042 0 1935 130 23 0 chr17 1419416 1419716 -84018764 + AluSx SINE Alu 1 307 -5 1941 123 41 0 chr17 1419722 1419840 -84018640 + AluSg SINE Alu 1 113 -197 222 37 0 0 chr17 1419840 1419867 -84018613 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1941 123 41 0 chr17 1419867 1420041 -84018439 + AluSg SINE Alu 113 305 -5 251 275 14 14 chr17 1420114 1420183 -84018297 - MIR3 SINE MIR -129 79 11 2303 51 0 24 chr17 1420802 1421096 -84017384 - AluY SINE Alu -17 294 8 1295 184 3 89 chr17 1421206 1421533 -84016947 - AluJo SINE Alu -12 300 2 1750 158 14 0 chr17 1422303 1422594 -84015886 - AluJo SINE Alu -17 295 1 2314 78 7 0 chr17 1423730 1424039 -84014441 + AluSp SINE Alu 1 311 -2 2121 86 41 0 chr17 1424042 1424334 -84014146 + AluSc SINE Alu 1 304 -5 355 331 35 14 chr17 1424397 1424542 -84013938 + MIR3 SINE MIR 2 149 -59 355 293 67 43 chr17 1424561 1424725 -84013755 - MER5B DNA MER1_type -10 168 1 1740 152 26 69 chr17 1424741 1425030 -84013450 + MER58B DNA MER1_type 9 283 -2137 1956 60 0 8 chr17 1425030 1425318 -84013162 - AluY SINE Alu 0 321 36 1740 152 26 69 chr17 1425318 1425375 -84013105 + MER58B DNA MER1_type 283 341 0 1907 147 0 0 chr17 1426246 1426545 -84011935 - AluSx SINE Alu -13 299 1 341 321 177 55 chr17 1426624 1426951 -84011529 - L2 LINE L2 0 3272 2906 2785 7 0 0 chr17 1427033 1427343 -84011137 + AluY SINE Alu 1 310 -1 333 236 14 0 chr17 1427357 1427429 -84011051 - L2 LINE L2 -561 2753 2681 5330 54 9 6 chr17 1427447 1428134 -84010346 + SVA Other Other 719 1386 0 1578 171 0 43 chr17 1428390 1428694 -84009786 + AluJb SINE Alu 1 291 -21 225 83 0 0 chr17 1428862 1428898 -84009582 + (TATG)n Simple_repeat Simple_repeat 2 37 0 974 108 0 51 chr17 1428900 1428991 -84009489 - AluSg/x SINE Alu -26 283 202 2222 77 20 3 chr17 1428991 1429288 -84009192 - AluSc SINE Alu -7 302 1 974 108 0 51 chr17 1429288 1429353 -84009127 - AluSg/x SINE Alu -107 202 135 359 220 43 26 chr17 1429478 1429604 -84008876 + L2 LINE L2 2764 2952 -361 1991 107 30 3 chr17 1429647 1429946 -84008534 + AluSg SINE Alu 1 307 -3 267 103 0 0 chr17 1429949 1429988 -84008492 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 225 176 7 chr17 1430003 1430145 -84008335 - MIR SINE MIR -10 252 87 1900 140 3 7 chr17 1430184 1430484 -84007996 + AluSx SINE Alu 1 299 -13 1277 164 22 4 chr17 1430491 1430723 -84007757 + AluJo SINE Alu 61 296 -16 1762 130 58 0 chr17 1430729 1431006 -84007474 + AluSg SINE Alu 6 298 -12 1629 118 121 4 chr17 1431333 1431605 -84006875 + AluJb SINE Alu 1 304 -8 2175 105 0 13 chr17 1432623 1432936 -84005544 + AluSx SINE Alu 1 309 -3 2260 82 0 25 chr17 1432936 1433250 -84005230 + AluY SINE Alu 1 307 -4 302 272 12 0 chr17 1433274 1433355 -84005125 + L1ME3A LINE L1 6065 6146 -24 1967 151 0 0 chr17 1436530 1436828 -84001652 + AluSx SINE Alu 1 298 -14 380 222 86 0 chr17 1437067 1437148 -84001332 + MER20B DNA MER1_type 88 175 -608 1934 99 35 0 chr17 1437148 1437432 -84001048 + AluSx SINE Alu 1 294 -18 515 182 159 30 chr17 1437533 1437665 -84000815 - MER58C DNA MER1_type -8 207 59 1292 188 38 24 chr17 1439123 1439410 -83999070 - AluJb SINE Alu -20 292 2 2376 78 0 0 chr17 1439608 1439957 -83998523 - AluY SINE Alu 0 349 1 738 188 8 0 chr17 1439984 1440112 -83998368 - FLAM_C SINE Alu -12 131 3 1862 133 0 41 chr17 1440405 1440540 -83997940 + AluSx SINE Alu 5 144 -168 2205 82 0 3 chr17 1440540 1440832 -83997648 + AluY SINE Alu 1 291 -20 2292 57 0 51 chr17 1440836 1441152 -83997328 + AluY SINE Alu 4 303 -8 1862 133 0 41 chr17 1441152 1441326 -83997154 + AluSx SINE Alu 147 306 -6 348 325 17 8 chr17 1441672 1441789 -83996691 - MIR SINE MIR -88 174 57 1009 168 0 0 chr17 1441793 1441960 -83996520 + FRAM SINE Alu 1 167 -9 1647 181 10 3 chr17 1442240 1442532 -83995948 + AluJo SINE Alu 3 296 -16 516 135 14 0 chr17 1442929 1443003 -83995477 + AluJ/FLAM SINE Alu 2 76 -236 1805 130 91 0 chr17 1443016 1443301 -83995179 - AluSx SINE Alu -1 311 1 2181 110 0 3 chr17 1443342 1443651 -83994829 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 1443655 1443676 -83994804 + AT_rich Low_complexity Low_complexity 1 21 0 185 289 0 0 chr17 1444145 1444190 -83994290 + L2 LINE L2 2933 2977 -336 2886 185 25 74 chr17 1444342 1444567 -83993913 - MER82 DNA MER2_type 0 653 418 2168 73 28 0 chr17 1444567 1444853 -83993627 + AluY SINE Alu 1 294 -17 2886 185 25 74 chr17 1444853 1445144 -83993336 - MER82 DNA MER2_type -235 418 177 1800 139 0 32 chr17 1445144 1445289 -83993191 + AluSx SINE Alu 1 149 -163 1688 120 94 0 chr17 1445289 1445564 -83992916 + AluSg SINE Alu 1 301 -9 1800 139 0 32 chr17 1445564 1445728 -83992752 + AluSx SINE Alu 149 300 -12 2886 185 25 74 chr17 1445728 1445897 -83992583 - MER82 DNA MER2_type -476 177 1 1190 197 33 0 chr17 1445938 1446151 -83992329 + MER58A DNA MER1_type 1 220 -4 715 188 0 0 chr17 1446758 1446870 -83991610 + FLAM_C SINE Alu 9 120 -23 2001 128 0 0 chr17 1447050 1447346 -83991134 + AluSx SINE Alu 1 296 -16 1920 127 27 3 chr17 1448304 1448596 -83989884 - AluSp SINE Alu -14 299 1 2297 81 3 0 chr17 1448696 1448991 -83989489 - AluSp SINE Alu -17 296 1 2279 46 11 0 chr17 1449034 1449375 -83989105 - AluY SINE Alu 0 344 1 1641 182 0 10 chr17 1449673 1449969 -83988511 + AluJb SINE Alu 1 293 -19 2238 90 0 7 chr17 1450115 1450415 -83988065 - AluSx SINE Alu -14 298 1 252 269 35 122 chr17 1450532 1450590 -83987890 + L2 LINE L2 2689 2750 -564 655 143 17 0 chr17 1450590 1450709 -83987771 + L1MA4 LINE L1 6169 6289 -11 252 269 35 122 chr17 1450709 1450847 -83987633 + L2 LINE L2 2750 2868 -446 * 725 315 76 60 chr17 1450839 1451661 -83986819 - L2 LINE L2 -2 3270 2453 2259 86 0 7 chr17 1452171 1452473 -83986007 - AluSg SINE Alu -10 300 1 1172 173 122 0 chr17 1452726 1452963 -83985517 + AluJo SINE Alu 16 281 -31 322 141 218 39 chr17 1452976 1453054 -83985426 - AluJb SINE Alu -10 292 201 1399 181 50 11 chr17 1453062 1453339 -83985141 - AluJo SINE Alu -24 288 1 607 307 100 40 chr17 1453339 1453861 -83984619 + L2 LINE L2 2464 3020 -252 223 293 311 0 chr17 1453945 1454051 -83984429 + L2 LINE L2 3174 3312 -1 225 0 0 0 chr17 1454301 1454326 -83984154 + (A)n Simple_repeat Simple_repeat 1 25 0 2132 109 3 0 chr17 1454799 1455093 -83983387 + AluSq SINE Alu 1 295 -18 392 153 0 0 chr17 1455408 1455467 -83983013 - U4 snRNA snRNA -86 59 1 21 0 0 0 chr17 1456260 1456281 -83982199 + AT_rich Low_complexity Low_complexity 1 21 0 237 273 26 0 chr17 1456352 1456429 -83982051 + GA-rich Low_complexity Low_complexity 1 79 0 289 323 139 27 chr17 1456579 1456802 -83981678 + MIR SINE MIR 15 262 0 473 210 49 49 chr17 1456847 1457009 -83981471 + MER104 DNA Tc2 1 162 -18 4796 187 30 30 chr17 1457360 1457467 -83981013 + L1MB2 LINE L1 4280 4386 -1785 624 199 0 57 chr17 1457467 1457579 -83980901 + AluJo/FLAM SINE Alu 1 105 -197 2128 125 0 0 chr17 1457579 1457884 -83980596 - AluSx SINE Alu -7 305 1 624 199 0 57 chr17 1457884 1457912 -83980568 + AluJo/FLAM SINE Alu 105 133 -169 4796 187 30 30 chr17 1457912 1458834 -83979646 + L1MB2 LINE L1 4386 5318 -853 2313 51 41 0 chr17 1458834 1459129 -83979351 - AluYa5 SINE Alu -4 307 1 4796 187 30 30 chr17 1459129 1459940 -83978540 + L1MB2 LINE L1 5318 6128 -43 2097 115 0 0 chr17 1459942 1460238 -83978242 + AluSx SINE Alu 1 296 -16 1788 152 14 7 chr17 1460250 1460547 -83977933 + AluSx SINE Alu 3 301 -11 1768 133 6 60 chr17 1460559 1460708 -83977772 + AluJb SINE Alu 1 126 -186 2564 43 0 0 chr17 1460708 1461011 -83977469 + AluY SINE Alu 1 303 -8 1768 133 6 60 chr17 1461011 1461178 -83977302 + AluJb SINE Alu 126 300 -12 1671 159 3 7 chr17 1461184 1461467 -83977013 + AluJo SINE Alu 1 282 -30 1784 128 17 17 chr17 1461545 1461835 -83976645 + AluSx SINE Alu 2 291 -21 246 62 0 0 chr17 1461847 1461879 -83976601 + (TA)n Simple_repeat Simple_repeat 1 32 0 485 180 172 0 chr17 1461894 1462016 -83976464 + L1M4 LINE L1 5321 5463 -715 2711 196 68 44 chr17 1462016 1462800 -83975680 + L1MB5 LINE L1 4618 5425 -744 836 170 52 72 chr17 1462796 1462960 -83975520 + L1MB5 LINE L1 5893 6054 -120 * 2532 40 0 0 chr17 1462960 1463262 -83975218 + AluY SINE Alu 1 302 -9 836 170 52 72 chr17 1463262 1463291 -83975189 + L1MB5 LINE L1 6054 6082 -92 1185 131 115 37 chr17 1463538 1463782 -83974698 + AluJo SINE Alu 39 301 -11 252 281 176 8 chr17 1465178 1465311 -83973169 + MIR SINE MIR 32 190 -72 1951 122 0 14 chr17 1465393 1465680 -83972800 - AluSx SINE Alu -25 287 5 207 0 0 0 chr17 1466276 1466299 -83972181 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 288 350 53 78 chr17 1466350 1466787 -83971693 + L2 LINE L2 2827 3252 -20 2005 125 3 7 chr17 1466790 1467087 -83971393 - AluSx SINE Alu -16 296 1 356 266 176 38 chr17 1467276 1467543 -83970937 + L2 LINE L2 1698 2001 -1313 354 323 195 22 chr17 1467587 1468333 -83970147 + L2 LINE L2 2203 3082 -190 1116 184 94 15 chr17 1468358 1468621 -83969859 + MER1B DNA MER1_type 1 334 -5 2041 127 0 31 chr17 1468622 1468945 -83969535 + AluSq SINE Alu 1 313 0 315 320 0 0 chr17 1469045 1469123 -83969357 + L2 LINE L2 3194 3271 -1 272 133 17 0 chr17 1469474 1469534 -83968946 + (CA)n Simple_repeat Simple_repeat 2 62 0 2609 64 3 6 chr17 1470348 1470660 -83967820 + AluY SINE Alu 1 311 0 2138 68 0 0 chr17 1473471 1473737 -83964743 + AluY SINE Alu 1 266 -45 1934 152 0 0 chr17 1473881 1474170 -83964310 + AluJo SINE Alu 1 289 -23 2271 81 7 0 chr17 1474172 1474479 -83964001 + AluY SINE Alu 1 309 -2 228 269 0 13 chr17 1475430 1475508 -83962972 + G-rich Low_complexity Low_complexity 2 78 0 203 240 10 42 chr17 1475867 1475963 -83962517 + (CGAGG)n Simple_repeat Simple_repeat 2 94 0 2232 59 31 21 chr17 1476165 1476453 -83962027 - AluSx SINE Alu -21 291 1 977 89 0 41 chr17 1476539 1476685 -83961795 + AluSg/x SINE Alu 155 294 -16 593 299 48 51 chr17 1477301 1477595 -83960885 + HAL1 LINE L1 1116 1408 -1099 2452 79 7 3 chr17 1477605 1477909 -83960571 - AluSq SINE Alu -8 305 1 2082 104 17 3 chr17 1477946 1478235 -83960245 + AluSx SINE Alu 1 293 -19 2365 96 0 0 chr17 1478345 1478646 -83959834 + AluSx SINE Alu 1 301 -11 247 366 0 12 chr17 1479275 1479439 -83959041 + (TGG)n Simple_repeat Simple_repeat 1 162 0 235 264 64 16 chr17 1479986 1480111 -83958369 + L1M4 LINE L1 2873 3003 -3143 209 293 193 14 chr17 1480330 1480470 -83958010 + L2 LINE L2 2301 2465 -849 1692 117 144 4 chr17 1480487 1480743 -83957737 + AluSg1 SINE Alu 1 292 -17 2262 92 7 3 chr17 1480747 1481052 -83957428 + AluSq SINE Alu 1 306 0 807 170 0 0 chr17 1481052 1481173 -83957307 - AluJo SINE Alu -185 127 1 401 211 0 0 chr17 1482170 1482257 -83956223 - L1M3 LINE L1 -517 5639 5565 955 156 65 0 chr17 1482263 1482417 -83956063 - AluJb SINE Alu -148 164 1 1966 144 0 46 chr17 1482474 1482656 -83955824 - AluSx SINE Alu -1 311 149 2519 73 0 0 chr17 1482656 1482956 -83955524 - AluY SINE Alu -11 300 1 1966 144 0 46 chr17 1482956 1483099 -83955381 - AluSx SINE Alu -163 149 1 545 148 176 0 chr17 1483104 1483212 -83955268 - FRAM SINE Alu 0 176 50 1745 168 10 17 chr17 1483264 1483561 -83954919 + AluJb SINE Alu 1 295 -17 1872 175 0 28 chr17 1483838 1484158 -83954322 + AluJo SINE Alu 1 311 -1 420 240 124 46 chr17 1484159 1484225 -83954255 + L1ME4a LINE L1 5369 5428 -693 2237 109 0 0 chr17 1484225 1484518 -83953962 + AluY SINE Alu 2 294 -17 420 240 124 46 chr17 1484518 1484813 -83953667 + L1ME4a LINE L1 5428 5751 -370 830 215 80 6 chr17 1484838 1485001 -83953479 - FAM SINE Alu 0 175 1 2294 88 10 0 chr17 1485058 1485352 -83953128 + AluSx SINE Alu 1 297 -15 2298 106 10 0 chr17 1485364 1485665 -83952815 + AluSq SINE Alu 1 304 -9 241 267 33 33 chr17 1485795 1485915 -83952565 + L1ME4a LINE L1 6000 6119 -2 2252 114 0 7 chr17 1486078 1486212 -83952268 + AluSp SINE Alu 1 134 -179 2671 50 0 0 chr17 1486212 1486514 -83951966 + AluY SINE Alu 1 302 -9 2252 114 0 7 chr17 1486514 1486685 -83951795 + AluSp SINE Alu 134 304 -9 63 36 0 0 chr17 1486738 1486822 -83951658 + AT_rich Low_complexity Low_complexity 1 84 0 2474 74 3 0 chr17 1486872 1487170 -83951310 + AluSg SINE Alu 1 299 -11 199 302 78 35 chr17 1487659 1487775 -83950705 - MIR SINE MIR -32 230 110 188 135 27 0 chr17 1487887 1487924 -83950556 + (TA)n Simple_repeat Simple_repeat 1 38 0 1464 165 149 26 chr17 1487929 1488238 -83950242 + MER7A DNA MER2_type 1 345 -1 1111 117 29 133 chr17 1488458 1488508 -83949972 + AluSq SINE Alu 87 141 -172 1976 141 3 44 chr17 1488508 1488617 -83949863 + AluSx SINE Alu 4 116 -196 2092 76 10 45 chr17 1488617 1488932 -83949548 - AluY SINE Alu 0 305 1 1976 141 3 44 chr17 1488932 1489140 -83949340 + AluSx SINE Alu 116 309 -3 2338 66 0 13 chr17 1489140 1489444 -83949036 + AluY SINE Alu 1 300 -11 1111 117 29 133 chr17 1489444 1489632 -83948848 + AluSq SINE Alu 139 301 -12 194 309 62 0 chr17 1489641 1489722 -83948758 - L2 LINE L2 -775 2539 2454 2039 134 10 19 chr17 1490047 1490360 -83948120 - AluJb SINE Alu -2 310 1 2172 83 35 54 chr17 1490367 1490680 -83947800 - AluY SINE Alu -4 307 1 964 233 185 6 chr17 1490893 1491249 -83947231 + L2 LINE L2 2046 2465 -849 1199 153 42 0 chr17 1491302 1491491 -83946989 - AluJo SINE Alu -115 197 1 1173 258 132 53 chr17 1491493 1491722 -83946758 + L2 LINE L2 2466 2676 -637 2466 82 0 0 chr17 1491722 1492028 -83946452 - AluY SINE Alu -5 306 1 1173 258 132 53 chr17 1492028 1492162 -83946318 + L2 LINE L2 2676 2798 -515 2373 93 7 0 chr17 1492162 1492464 -83946016 - AluSg SINE Alu -6 304 1 2005 146 0 7 chr17 1492471 1492772 -83945708 - AluSx SINE Alu -13 299 1 1173 258 132 53 chr17 1492772 1493156 -83945324 + L2 LINE L2 2803 3313 0 2208 94 7 17 chr17 1493693 1493991 -83944489 - AluSg SINE Alu -15 295 1 889 138 15 0 chr17 1494009 1494139 -83944341 - FLAM_C SINE Alu -11 132 1 2389 58 0 52 chr17 1494413 1494722 -83943758 - AluY SINE Alu -14 297 5 1701 136 0 0 chr17 1494732 1494975 -83943505 - AluSq SINE Alu -70 243 1 904 224 5 14 chr17 1496881 1497091 -83941389 - MER6B DNA MER2_type -2 208 1 2353 96 0 3 chr17 1497519 1497821 -83940659 - AluSg SINE Alu -9 301 1 1050 142 0 0 chr17 1497832 1497987 -83940493 - AluSq SINE Alu -8 305 151 781 164 59 110 chr17 1498588 1498733 -83939747 - AluJo SINE Alu -62 250 99 2290 112 0 0 chr17 1498733 1499029 -83939451 + AluSq SINE Alu 1 296 -17 781 164 59 110 chr17 1499029 1499044 -83939436 - AluJo SINE Alu -213 99 85 1944 162 0 3 chr17 1499044 1499346 -83939134 + AluSx SINE Alu 1 301 -11 781 164 59 110 chr17 1499346 1499403 -83939077 - AluJo SINE Alu -227 85 43 273 307 81 25 chr17 1499423 1499706 -83938774 + L1ME4a LINE L1 5628 5926 -195 2159 112 31 0 chr17 1499879 1500173 -83938307 + AluSx SINE Alu 1 303 -9 813 109 23 62 chr17 1500175 1500303 -83938177 + AluSq/x SINE Alu 1 123 -189 1564 96 0 24 chr17 1500305 1500545 -83937935 + AluSg/x SINE Alu 94 312 0 2652 45 0 13 chr17 1500549 1500858 -83937622 + AluY SINE Alu 5 309 -2 239 147 0 0 chr17 1500921 1500955 -83937525 - Alu SINE Alu -94 39 6 2363 81 3 10 chr17 1501833 1502131 -83936349 - AluSp SINE Alu -17 296 1 2524 142 51 5 chr17 1503248 1503657 -83934823 + MSTA LTR MaLR 1 428 0 2587 67 0 3 chr17 1504465 1504777 -83933703 + AluY SINE Alu 1 311 0 185 347 51 20 chr17 1506135 1506233 -83932247 + L2 LINE L2 3199 3299 -14 195 291 36 0 chr17 1507104 1507159 -83931321 + L2 LINE L2 3200 3256 -16 21 0 0 0 chr17 1507357 1507378 -83931102 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr17 1509449 1509481 -83928999 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr17 1509723 1509779 -83928701 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr17 1509987 1510024 -83928456 + GC_rich Low_complexity Low_complexity 1 37 0 409 197 171 26 chr17 1510465 1510582 -83927898 + L2 LINE L2 3177 3310 -3 2262 86 0 0 chr17 1510702 1510981 -83927499 + AluSx SINE Alu 16 294 -18 2042 100 3 37 chr17 1511056 1511355 -83927125 + AluSg SINE Alu 1 289 -21 2135 70 56 7 chr17 1511355 1511640 -83926840 + AluY SINE Alu 1 300 -11 2174 82 43 4 chr17 1512035 1512315 -83926165 - AluSc SINE Alu -15 294 4 2401 57 0 13 chr17 1512502 1512803 -83925677 - AluY SINE Alu -13 298 2 1433 110 186 13 chr17 1513039 1513304 -83925176 - AluSg1 SINE Alu 0 306 1 1687 210 120 51 chr17 1513666 1514061 -83924419 + L1ME3A LINE L1 5512 5965 -205 2072 105 6 37 chr17 1514061 1514384 -83924096 + AluSq SINE Alu 1 313 0 1687 210 120 51 chr17 1514384 1514598 -83923882 + L1ME3A LINE L1 5965 6163 -7 2272 86 3 7 chr17 1514629 1514921 -83923559 + AluSx SINE Alu 1 291 -21 395 274 89 30 chr17 1515659 1515794 -83922686 + MER5B DNA MER1_type 1 143 -35 648 151 0 19 chr17 1515796 1515902 -83922578 - MER5A DNA MER1_type -1 188 85 449 301 24 48 chr17 1516477 1516686 -83921794 - L2 LINE L2 -2 3311 3108 525 255 123 19 chr17 1516710 1516922 -83921558 + MIR SINE MIR 22 255 -7 1108 44 7 15 chr17 1517150 1517286 -83921194 + AluSq/x SINE Alu 1 135 -178 2505 42 0 13 chr17 1517286 1517592 -83920888 + AluY SINE Alu 1 302 -9 295 238 69 30 chr17 1517593 1517694 -83920786 - Charlie8 DNA MER1_type -2312 105 1 1643 158 3 38 chr17 1518798 1519090 -83919390 + AluJo SINE Alu 1 282 -30 211 71 0 0 chr17 1519091 1519119 -83919361 + (TTTA)n Simple_repeat Simple_repeat 1 180 0 2158 94 0 14 chr17 1519119 1519405 -83919075 - AluSx SINE Alu -1 309 1 22 0 0 0 chr17 1519408 1519430 -83919050 + AT_rich Low_complexity Low_complexity 1 22 0 701 199 0 15 chr17 1519635 1519771 -83918709 - FLAM_A SINE Alu -1 141 8 434 132 92 0 chr17 1520328 1520404 -83918076 + FLAM SINE Alu 42 124 -19 256 237 129 11 chr17 1520572 1520665 -83917815 + MIR SINE MIR 17 120 -142 1660 117 11 25 chr17 1520766 1521075 -83917405 - AluJb SINE Alu 0 310 6 1993 119 3 7 chr17 1521110 1521403 -83917077 + AluSx SINE Alu 1 292 -20 605 196 110 83 chr17 1521497 1521798 -83916682 + L1MC5 LINE L1 7605 7913 -48 2348 60 0 10 chr17 1521809 1522110 -83916370 - AluY SINE Alu -13 298 1 991 111 7 0 chr17 1522110 1522245 -83916235 - AluSq/x SINE Alu -176 136 1 379 276 39 103 chr17 1522246 1522355 -83916125 - L2 LINE L2 -1635 1679 1591 2134 114 0 25 chr17 1522355 1522671 -83915809 + AluSx SINE Alu 5 312 0 379 276 39 103 chr17 1522671 1522793 -83915687 - L2 LINE L2 -1723 1591 1463 347 271 43 129 chr17 1522799 1523001 -83915479 - MIR SINE MIR -7 255 78 2134 99 0 7 chr17 1523001 1523293 -83915187 + AluSx SINE Alu 6 295 -17 347 271 43 129 chr17 1523293 1523345 -83915135 - MIR SINE MIR -184 78 23 965 145 12 18 chr17 1523678 1523844 -83914636 - AluSx SINE Alu -101 211 47 2682 19 0 6 chr17 1524805 1525118 -83913362 - AluY SINE Alu 0 311 1 419 290 93 52 chr17 1525453 1525527 -83912953 - L1MC4a LINE L1 -1633 6175 6106 1244 192 0 64 chr17 1525527 1525840 -83912640 + AluSx SINE Alu 1 293 -9 419 290 93 52 chr17 1525840 1525958 -83912522 - L1MC4a LINE L1 -1702 6106 5975 1787 174 13 7 chr17 1525965 1526270 -83912210 - AluJo SINE Alu -5 307 1 1006 68 8 8 chr17 1526280 1526412 -83912068 - AluY SINE Alu -179 132 1 500 301 130 17 chr17 1526415 1526836 -83911644 - L1MC4a LINE L1 -344 5822 5497 683 121 16 8 chr17 1529449 1529573 -83908907 + L1PB1 LINE L1 5742 5866 -285 2166 110 3 10 chr17 1529573 1529882 -83908598 - AluSq SINE Alu -6 307 1 1574 180 3 17 chr17 1530515 1530809 -83907671 + AluJb SINE Alu 1 290 -22 2175 87 0 13 chr17 1530954 1531265 -83907215 - AluY SINE Alu 0 311 5 1848 125 3 26 chr17 1532166 1532471 -83906009 + AluSx SINE Alu 4 301 -11 224 296 56 0 chr17 1532728 1532799 -83905681 - MIR3 SINE MIR -50 158 84 328 281 66 33 chr17 1532914 1533035 -83905445 + MIR SINE MIR 17 141 -67 2186 100 7 3 chr17 1537943 1538244 -83900236 - AluSg SINE Alu -8 302 1 285 383 14 16 chr17 1540215 1540365 -83898115 + MIR3 SINE MIR 4 136 -72 223 240 20 0 chr17 1541533 1541583 -83896897 + CT-rich Low_complexity Low_complexity 2 52 0 443 275 54 72 chr17 1543792 1544014 -83894466 + MIR SINE MIR 28 245 -17 248 309 74 9 chr17 1544195 1544303 -83894177 - MIR SINE MIR -60 148 33 190 369 16 41 chr17 1545926 1546048 -83892432 + MIR SINE MIR 83 201 -61 406 239 17 34 chr17 1546115 1546232 -83892248 + MIR SINE MIR 17 131 -77 1677 176 0 22 chr17 1546621 1546940 -83891540 + AluJb SINE Alu 1 312 0 2090 82 0 26 chr17 1549575 1549880 -83888600 + AluSg SINE Alu 1 297 -13 331 282 69 23 chr17 1550403 1550534 -83887946 - MER5B DNA MER1_type 0 178 42 668 172 0 83 chr17 1550537 1550682 -83887798 + FLAM_C SINE Alu 1 133 0 1510 131 173 19 chr17 1550691 1550951 -83887529 + AluSg SINE Alu 1 300 0 185 304 0 0 chr17 1550977 1551023 -83887457 + MER5B DNA MER1_type 131 176 -2 507 148 0 0 chr17 1551306 1551394 -83887086 + (CCCCAG)n Simple_repeat Simple_repeat 3 90 0 192 97 0 0 chr17 1554188 1554219 -83884261 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1302 186 45 11 chr17 1554219 1554488 -83883992 - AluJo SINE Alu -34 278 1 189 292 62 15 chr17 1555084 1555149 -83883331 + L2 LINE L2 3190 3257 -15 1992 91 0 24 chr17 1555312 1555609 -83882871 - AluSx SINE Alu -22 290 1 378 290 38 26 chr17 1556176 1556347 -83882133 + MIR SINE MIR 38 209 -53 360 64 0 0 chr17 1557083 1557130 -83881350 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 194 11 86 chr17 1560003 1560096 -83878384 + G-rich Low_complexity Low_complexity 2 87 0 2264 100 3 3 chr17 1561818 1562128 -83876352 - AluSp SINE Alu -3 310 1 1372 187 98 32 chr17 1562908 1563224 -83875256 + MER1B DNA MER1_type 1 337 0 2059 79 0 26 chr17 1563567 1563870 -83874610 - AluSx SINE Alu -17 295 1 219 287 44 52 chr17 1564009 1564145 -83874335 - L3b LINE CR1 -134 1449 1315 620 157 8 60 chr17 1564388 1564522 -83873958 - FLAM_A SINE Alu -2 131 5 220 350 29 10 chr17 1564578 1564681 -83873799 + L2 LINE L2 2957 3061 -211 246 185 33 43 chr17 1566529 1566621 -83871859 + G-rich Low_complexity Low_complexity 6 96 0 259 75 0 25 chr17 1566883 1566923 -83871557 + (CA)n Simple_repeat Simple_repeat 1 39 0 308 297 0 43 chr17 1567834 1567972 -83870508 + G-rich Low_complexity Low_complexity 4 135 0 196 260 0 55 chr17 1568231 1568304 -83870176 - L2 LINE L2 -41 3272 3204 203 267 17 17 chr17 1568629 1568689 -83869791 - MIR SINE MIR -71 137 78 209 259 35 12 chr17 1571617 1571702 -83866778 + C-rich Low_complexity Low_complexity 6 92 0 23 68 0 0 chr17 1573425 1573469 -83865011 + GC_rich Low_complexity Low_complexity 1 44 0 205 154 0 58 chr17 1573660 1573712 -83864768 + CT-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr17 1573796 1573825 -83864655 + GC_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr17 1574825 1574879 -83863601 + GC_rich Low_complexity Low_complexity 1 54 0 280 206 44 21 chr17 1575000 1575087 -83863393 - MIR SINE MIR -57 151 87 307 246 0 14 chr17 1576137 1576206 -83862274 + Tigger5 DNA MER2_type 1 68 -2255 2069 91 0 86 chr17 1576752 1577091 -83861389 + AluSx SINE Alu 1 310 -2 2455 84 0 7 chr17 1577439 1577747 -83860733 - AluSx SINE Alu -6 306 1 237 219 31 47 chr17 1578314 1578378 -83860102 - L2 LINE L2 -4 3268 3206 872 220 162 24 chr17 1578563 1578859 -83859621 - MER2 DNA MER2_type -8 337 1 782 147 7 29 chr17 1579146 1579282 -83859198 + FLAM_A SINE Alu 1 133 0 384 285 134 26 chr17 1580588 1580812 -83857668 + L1M4 LINE L1 2915 3113 -3033 2135 89 0 71 chr17 1580812 1581148 -83857332 + AluSx SINE Alu 1 312 0 2398 82 0 0 chr17 1581154 1581448 -83857032 + AluSg SINE Alu 1 294 -16 2752 22 0 16 chr17 1581457 1581773 -83856707 + AluY SINE Alu 1 311 0 384 285 134 26 chr17 1581773 1581822 -83856658 + L1M4 LINE L1 3124 5201 -945 542 319 65 56 chr17 1582847 1583121 -83855359 - L1ME4a LINE L1 -95 6026 5756 2477 53 0 30 chr17 1583121 1583425 -83855055 - AluY SINE Alu -16 295 1 1971 125 20 16 chr17 1583425 1583596 -83854884 - AluSx SINE Alu -7 305 130 210 37 0 0 chr17 1583596 1583623 -83854857 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1971 125 20 16 chr17 1583623 1583754 -83854726 - AluSx SINE Alu -182 130 1 542 319 65 56 chr17 1583754 1584048 -83854432 - L1ME4a LINE L1 -364 5757 5452 354 72 0 119 chr17 1584349 1584441 -83854039 - Alu SINE Alu -241 61 1 774 179 0 21 chr17 1584459 1584604 -83853876 - FLAM_C SINE Alu 0 143 2 1379 182 104 7 chr17 1584779 1584915 -83853565 + AluSx SINE Alu 1 122 -190 2383 99 7 0 chr17 1584915 1585218 -83853262 + AluSq SINE Alu 1 305 -8 1379 182 104 7 chr17 1585218 1585350 -83853130 + AluSx SINE Alu 122 295 -17 277 139 0 0 chr17 1585539 1585582 -83852898 + Alu SINE Alu 249 291 -11 202 292 0 0 chr17 1585634 1585682 -83852798 + L2 LINE L2 3223 3270 -2 2028 156 20 0 chr17 1585711 1586012 -83852468 + AluSx SINE Alu 1 307 -5 2375 103 0 0 chr17 1586012 1586323 -83852157 + AluSx SINE Alu 1 311 -1 715 155 69 27 chr17 1586333 1586569 -83851911 - MSTD LTR MaLR -19 371 87 2023 133 14 3 chr17 1586743 1587037 -83851443 - AluSx SINE Alu -15 297 1 2816 214 8 34 chr17 1587127 1587743 -83850737 + MER82 DNA MER2_type 2 601 -52 1670 167 47 7 chr17 1587743 1588019 -83850461 + AluJb SINE Alu 1 287 -25 1108 142 0 11 chr17 1588209 1588385 -83850095 + AluSg/x SINE Alu 139 312 0 480 260 115 35 chr17 1588401 1588601 -83849879 + MIR SINE MIR 20 235 -27 1036 240 67 6 chr17 1588712 1589054 -83849426 + L1MC/D LINE L1 4902 5264 -882 915 138 0 36 chr17 1589054 1589192 -83849288 + AluSq/x SINE Alu 1 133 -180 671 198 35 108 chr17 1589198 1589352 -83849128 + L1MC/D LINE L1 5319 5448 -911 1988 73 84 15 chr17 1589352 1589626 -83848854 + AluY SINE Alu 1 293 -18 671 198 35 108 chr17 1589626 1589729 -83848751 + L1MC/D LINE L1 5448 5557 -802 273 107 321 0 chr17 1589835 1589891 -83848589 + Tigger1 DNA MER2_type 159 232 -2186 803 138 32 0 chr17 1589934 1590057 -83848423 + FRAM SINE Alu 36 162 -14 1694 95 5 5 chr17 1590057 1590279 -83848201 + AluSc SINE Alu 1 222 -87 1391 122 54 71 chr17 1590281 1590407 -83848073 + Tigger1 DNA MER2_type 1454 1581 -837 1528 175 74 7 chr17 1590407 1590692 -83847788 + AluJb SINE Alu 1 304 -8 1391 122 54 71 chr17 1590692 1590754 -83847726 + Tigger1 DNA MER2_type 1581 1643 -775 2382 99 0 0 chr17 1590754 1591057 -83847423 + AluSg SINE Alu 1 303 -7 1391 122 54 71 chr17 1591057 1591163 -83847317 + Tigger1 DNA MER2_type 1643 1744 -674 2202 115 6 13 chr17 1591166 1591453 -83847027 + AluSx SINE Alu 1 287 -25 183 80 0 0 chr17 1591453 1591478 -83847002 + (CA)n Simple_repeat Simple_repeat 2 26 0 2202 115 6 13 chr17 1591478 1591503 -83846977 + AluSx SINE Alu 287 311 -1 1194 97 0 0 chr17 1591736 1591891 -83846589 + AluSg/x SINE Alu 150 304 -8 1350 124 0 10 chr17 1592043 1592244 -83846236 - MER1B DNA MER1_type 0 339 141 2297 92 10 3 chr17 1592688 1592994 -83845486 - AluY SINE Alu -3 308 1 519 103 23 11 chr17 1593010 1593097 -83845383 - AluY SINE Alu -180 131 44 1256 138 0 6 chr17 1593354 1593535 -83844945 + AluSg/x SINE Alu 126 305 -5 21 0 0 0 chr17 1593600 1593621 -83844859 + AT_rich Low_complexity Low_complexity 1 21 0 194 269 128 26 chr17 1594259 1594337 -83844143 + MIR SINE MIR 106 191 -71 396 274 30 90 chr17 1595371 1595446 -83843034 + MER5A DNA MER1_type 1 79 -110 2357 113 0 0 chr17 1595446 1595748 -83842732 + AluSp SINE Alu 1 302 -11 2356 96 7 0 chr17 1595758 1596060 -83842420 + AluSg SINE Alu 1 304 -6 396 274 30 90 chr17 1596060 1596174 -83842306 + MER5A DNA MER1_type 88 189 0 326 312 46 0 chr17 1596336 1596445 -83842035 + L1MC/D LINE L1 5703 5816 -1992 1965 118 0 58 chr17 1596457 1596770 -83841710 + AluJb SINE Alu 3 297 -15 1740 86 52 0 chr17 1596774 1597007 -83841473 + AluY SINE Alu 1 245 -66 1470 115 0 5 chr17 1597107 1597307 -83841173 + AluSg/x SINE Alu 104 302 -10 2211 93 4 4 chr17 1597314 1597642 -83840838 + AluSc SINE Alu 1 328 0 1806 129 0 0 chr17 1598076 1598316 -83840164 + AluSx SINE Alu 52 291 -21 662 208 120 5 chr17 1598327 1598519 -83839961 + L1ME1 LINE L1 5742 5955 -211 1936 177 0 0 chr17 1598519 1598813 -83839667 + AluJb SINE Alu 1 294 -18 2385 65 24 0 chr17 1598956 1599246 -83839234 - AluY SINE Alu -14 297 1 2327 123 0 0 chr17 1599246 1599554 -83838926 - AluSx SINE Alu -4 308 1 933 277 89 48 chr17 1599560 1599881 -83838599 - HAL1 LINE L1 0 2507 2201 2348 86 3 10 chr17 1599881 1600184 -83838296 - AluSp SINE Alu -12 301 1 933 277 89 48 chr17 1600184 1600544 -83837936 - HAL1 LINE L1 -306 2201 1798 341 245 126 7 chr17 1600584 1600727 -83837753 - L1ME4a LINE L1 -16 6105 5946 234 123 70 18 chr17 1601036 1601093 -83837387 - MER3 DNA MER1_type -7 202 143 2173 113 0 36 chr17 1601093 1601402 -83837078 - AluSq SINE Alu -15 298 1 1741 122 0 4 chr17 1601404 1601641 -83836839 - AluSx SINE Alu -23 289 54 977 118 24 18 chr17 1601754 1601924 -83836556 + L1MB4 LINE L1 6009 6179 -1 1708 159 0 53 chr17 1602059 1602391 -83836089 - AluJo SINE Alu 0 316 1 31 26 0 0 chr17 1602655 1602693 -83835787 + AT_rich Low_complexity Low_complexity 1 38 0 204 294 165 0 chr17 1602785 1602894 -83835586 + L2 LINE L2 2442 2568 -746 1080 178 146 66 chr17 1602922 1603209 -83835271 - AluJo SINE Alu 0 312 3 332 310 103 54 chr17 1603211 1603472 -83835008 + L2 LINE L2 2616 2889 -425 975 68 0 0 chr17 1603493 1603611 -83834869 - AluSc SINE Alu -17 292 175 290 279 52 64 chr17 1603615 1603787 -83834693 + L2 LINE L2 2941 3110 -162 1086 122 6 6 chr17 1604265 1604421 -83834059 + AluSq SINE Alu 1 156 -157 500 115 35 35 chr17 1604425 1604512 -83833968 - L1M3 LINE L1 -514 5669 5583 269 211 146 89 chr17 1604620 1604743 -83833737 + MLT1I LTR MaLR 48 177 -232 209 179 0 90 chr17 1604940 1605007 -83833473 + T-rich Low_complexity Low_complexity 1 61 0 1546 142 0 0 chr17 1605322 1605534 -83832946 - AluJb SINE Alu -6 306 95 427 133 0 0 chr17 1605540 1605600 -83832880 - AluJb SINE Alu -158 154 95 970 164 0 31 chr17 1605606 1605765 -83832715 - AluJo SINE Alu -158 154 1 696 126 0 0 chr17 1606158 1606261 -83832219 - AluSg/x SINE Alu -11 299 197 596 174 0 37 chr17 1606260 1606369 -83832111 + AluJb SINE Alu 202 306 -6 * 2134 126 10 3 chr17 1606462 1606763 -83831717 - AluSq SINE Alu -7 306 4 2163 97 0 7 chr17 1607441 1607748 -83830732 - AluSx SINE Alu 0 312 22 1008 116 123 0 chr17 1607848 1607994 -83830486 - AluSq SINE Alu -149 164 1 475 270 32 0 chr17 1608005 1608160 -83830320 + L1MC/D LINE L1 5649 5811 -330 1737 79 0 0 chr17 1608166 1608381 -83830099 - AluY SINE Alu -2 309 95 1200 66 0 26 chr17 1608382 1608533 -83829947 - AluY SINE Alu -164 147 1 2370 87 3 7 chr17 1608533 1608833 -83829647 - AluSq SINE Alu -14 299 1 1307 128 0 0 chr17 1610239 1610419 -83828061 - AluSg/x SINE Alu 0 312 133 674 181 60 15 chr17 1610419 1610552 -83827928 + AluJo SINE Alu 14 152 -160 2092 114 3 11 chr17 1610654 1611005 -83827475 - L1PBa LINE L1 -4103 2760 2413 1603 92 9 0 chr17 1611005 1611234 -83827246 + THE1A LTR MaLR 125 355 0 1308 137 15 5 chr17 1611237 1611441 -83827039 + AluJb SINE Alu 107 312 0 1414 121 7 0 chr17 1611669 1611923 -83826557 + L1PA13 LINE L1 5845 6149 -14 2250 103 0 7 chr17 1612183 1612473 -83826007 - AluSc SINE Alu -21 288 1 1144 222 4 50 chr17 1613006 1613267 -83825213 + AluJo SINE Alu 43 291 -21 183 361 21 0 chr17 1613303 1613400 -83825080 + MIR SINE MIR 108 206 -56 950 145 47 47 chr17 1613526 1613698 -83824782 + AluJb SINE Alu 1 172 -140 533 495 55 24 chr17 1613736 1614025 -83824455 + AluJb SINE Alu 2 299 -3 2017 156 0 7 chr17 1614134 1614442 -83824038 + AluJb SINE Alu 1 306 -6 363 23 0 0 chr17 1614626 1614670 -83823810 + (TG)n Simple_repeat Simple_repeat 2 45 0 1309 52 0 0 chr17 1614681 1614834 -83823646 - AluY SINE Alu -7 304 152 403 82 0 0 chr17 1614834 1614883 -83823597 - Alu SINE Alu -261 50 2 2367 96 0 3 chr17 1615250 1615551 -83822929 - AluSg SINE Alu -10 300 1 2086 101 3 18 chr17 1616407 1616720 -83821760 - AluSq SINE Alu 0 312 4 1525 116 4 42 chr17 1616923 1617164 -83821316 + AluSg/x SINE Alu 71 302 -8 2385 91 0 0 chr17 1617491 1617789 -83820691 - AluSx SINE Alu -13 299 2 1037 152 0 43 chr17 1617809 1617993 -83820487 - AluSg/x SINE Alu 0 312 137 1863 163 27 3 chr17 1618000 1618300 -83820180 - AluJo SINE Alu -5 307 1 346 320 8 40 chr17 1618778 1618903 -83819577 + MIR3 SINE MIR 41 161 -47 2261 109 10 3 chr17 1618946 1619250 -83819230 + AluSx SINE Alu 1 306 -6 316 125 0 0 chr17 1619667 1619723 -83818757 - Alu SINE Alu 0 301 246 351 284 24 16 chr17 1619915 1620042 -83818438 - MLT1L LTR MaLR -2 613 486 314 54 0 0 chr17 1620246 1620283 -83818197 + U2 snRNA snRNA 1 37 -151 2146 97 18 0 chr17 1620362 1620661 -83817819 + AluY SINE Alu 1 284 -27 190 0 0 0 chr17 1620486 1620707 -83817773 + (CA)n Simple_repeat Simple_repeat 2 222 0 1825 114 11 7 chr17 1620707 1620988 -83817492 + AluSq SINE Alu 1 282 -31 757 122 28 0 chr17 1621034 1621141 -83817339 - FLAM_C SINE Alu -32 111 2 710 249 152 91 chr17 1621384 1621866 -83816614 - MLT1H LTR MaLR 0 549 39 1135 147 0 0 chr17 1621882 1622059 -83816421 + AluSg/x SINE Alu 136 312 0 826 78 5 63 chr17 1622479 1622670 -83815810 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2065 125 3 0 chr17 1622670 1623005 -83815475 - AluSp SINE Alu 0 336 1 24 0 0 0 chr17 1623141 1623165 -83815315 + AT_rich Low_complexity Low_complexity 1 24 0 1964 129 3 10 chr17 1623235 1623530 -83814950 - AluSx SINE Alu -19 293 1 1747 141 7 11 chr17 1623619 1623931 -83814549 - AluSg SINE Alu 0 311 1 675 167 0 111 chr17 1623931 1623943 -83814537 - AluJo SINE Alu -167 145 133 1873 138 0 7 chr17 1623943 1624240 -83814240 - AluSq SINE Alu -18 295 1 675 167 0 111 chr17 1624240 1624389 -83814091 - AluJo SINE Alu -179 133 2 320 314 95 57 chr17 1624932 1625228 -83813252 + L2 LINE L2 2449 2755 -559 392 171 49 12 chr17 1625240 1625322 -83813158 - MIR SINE MIR -5 257 173 316 271 0 24 chr17 1625351 1625436 -83813044 - MIR SINE MIR -178 84 2 1091 314 31 110 chr17 1625665 1625837 -83812643 - AluJo SINE Alu -9 293 156 2245 94 0 3 chr17 1625837 1626135 -83812345 + AluSq SINE Alu 1 297 -16 1091 314 31 110 chr17 1626135 1626280 -83812200 - AluJo SINE Alu -146 156 1 1854 107 21 24 chr17 1626848 1627137 -83811343 + AluSx SINE Alu 2 289 -23 25 31 0 0 chr17 1627141 1627173 -83811307 + AT_rich Low_complexity Low_complexity 1 32 0 325 202 0 138 chr17 1627176 1627285 -83811195 + L1MC4 LINE L1 6615 6708 -1334 298 217 24 36 chr17 1627292 1627543 -83810937 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 2324 87 3 0 chr17 1628551 1628863 -83809617 - AluSp SINE Alu 0 313 1 304 219 144 53 chr17 1629290 1629477 -83809003 - L1MC5 LINE L1 -182 7779 7576 23 0 0 0 chr17 1629502 1629525 -83808955 + AT_rich Low_complexity Low_complexity 1 23 0 1362 97 10 0 chr17 1629616 1629811 -83808669 - AluSp SINE Alu 0 313 117 249 368 34 8 chr17 1630009 1630051 -83808429 - L2 LINE L2 -237 3035 2996 1844 113 17 14 chr17 1630051 1630342 -83808138 + AluSx SINE Alu 1 292 -20 249 368 34 8 chr17 1630342 1630416 -83808064 - L2 LINE L2 -276 2996 2916 391 179 13 13 chr17 1631310 1631388 -83807092 + MIR SINE MIR 184 261 -1 430 340 32 6 chr17 1631597 1631753 -83806727 - MIR SINE MIR -75 187 28 1884 126 41 0 chr17 1631883 1632176 -83806304 - AluSq SINE Alu -8 305 1 2289 83 0 16 chr17 1632333 1632646 -83805834 - AluY SINE Alu -3 308 1 1909 128 3 13 chr17 1632691 1632997 -83805483 - AluSc SINE Alu -6 303 1 2030 135 3 6 chr17 1632997 1633308 -83805172 - AluSx SINE Alu -2 310 1 794 96 35 9 chr17 1633742 1633857 -83804623 + AluJb SINE Alu 1 118 -194 1031 141 0 70 chr17 1633879 1633990 -83804490 + Tigger6 DNA MER2_type 1423 1540 -57 2035 94 33 0 chr17 1633990 1634289 -83804191 + AluY SINE Alu 1 309 -2 2060 112 37 0 chr17 1634289 1634584 -83803896 + AluSg SINE Alu 1 306 -4 1031 141 0 70 chr17 1634584 1634656 -83803824 + Tigger6 DNA MER2_type 1538 1594 -3 * 1586 244 99 46 chr17 1634656 1635151 -83803329 - MLT2F LTR ERVL -98 565 45 444 299 62 17 chr17 1635187 1635364 -83803116 + MIR SINE MIR 1 185 -77 2219 96 3 0 chr17 1635393 1635705 -83802775 - AluSp SINE Alu 0 313 1 1851 152 3 10 chr17 1635849 1636158 -83802322 + AluJo SINE Alu 1 307 -5 298 287 10 30 chr17 1636195 1636296 -83802184 + MIR SINE MIR 98 196 -66 512 141 41 50 chr17 1636474 1636595 -83801885 + L1MC3 LINE L1 7665 7784 -1 808 153 79 95 chr17 1636615 1636736 -83801744 - MER5A DNA MER1_type -2 187 69 2097 100 3 0 chr17 1636736 1637026 -83801454 - AluSg SINE Alu -19 291 1 808 153 79 95 chr17 1637026 1637094 -83801386 - MER5A DNA MER1_type -120 69 1 205 190 52 0 chr17 1637359 1637417 -83801063 + (TA)n Simple_repeat Simple_repeat 1 61 0 1507 139 4 8 chr17 1637424 1637661 -83800819 + MER46A DNA MER2_type 1 236 0 1870 142 3 7 chr17 1637677 1637972 -83800508 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr17 1637972 1637996 -83800484 + AT_rich Low_complexity Low_complexity 1 24 0 816 189 9 108 chr17 1638113 1638266 -83800214 - L1M3 LINE L1 -541 5639 5472 755 208 0 0 chr17 1638266 1638396 -83800084 - FLAM_C SINE Alu -2 131 2 2064 125 0 3 chr17 1638402 1638706 -83799774 - AluSq SINE Alu -10 303 1 1939 141 0 13 chr17 1638707 1639052 -83799428 - AluSx SINE Alu 0 312 8 816 189 9 108 chr17 1639052 1639101 -83799379 - L1M3 LINE L1 -712 5468 5449 1622 173 3 14 chr17 1639336 1639631 -83798849 + AluJo SINE Alu 3 294 -18 536 264 8 8 chr17 1639643 1639772 -83798708 - L2 LINE L2 -3 3310 3182 1407 246 28 39 chr17 1639841 1640203 -83798277 + MLT1J LTR MaLR 3 360 -151 1306 193 30 43 chr17 1640212 1640513 -83797967 + AluJo SINE Alu 12 308 -4 199 109 0 43 chr17 1640525 1640571 -83797909 + (GAA)n Simple_repeat Simple_repeat 2 45 0 719 105 0 0 chr17 1640613 1640708 -83797772 - 7SLRNA srpRNA srpRNA -11 309 215 2309 90 6 0 chr17 1640708 1641019 -83797461 - AluSp SINE Alu 0 313 1 1614 111 4 0 chr17 1641019 1641244 -83797236 - 7SLRNA srpRNA srpRNA -93 227 1 266 253 0 13 chr17 1641249 1641324 -83797156 + MLT1J LTR MaLR 412 485 -26 229 268 237 0 chr17 1641384 1641481 -83796999 - L2 LINE L2 -223 3049 2930 977 90 0 8 chr17 1641586 1641720 -83796760 - AluSq/x SINE Alu -179 133 1 1551 173 3 26 chr17 1642512 1642648 -83795832 + AluJo SINE Alu 1 139 -173 2110 109 3 0 chr17 1642648 1642942 -83795538 + AluSg SINE Alu 1 295 -15 2377 59 3 13 chr17 1642944 1643251 -83795229 + AluY SINE Alu 1 304 -7 1551 173 3 26 chr17 1643251 1643418 -83795062 + AluJo SINE Alu 140 300 -12 2213 84 3 3 chr17 1643460 1643757 -83794723 + AluSq SINE Alu 1 297 -16 1426 176 97 38 chr17 1644034 1644374 -83794106 + LTR2B LTR ERV1 32 391 -99 867 45 0 0 chr17 1644392 1644502 -83793978 - SVA Other Other -1 1385 1276 563 136 2 0 chr17 1644504 1644598 -83793882 + LTR2B LTR ERV1 355 490 0 1073 151 0 0 chr17 1644599 1644765 -83793715 - AluSg/x SINE Alu -13 297 132 1520 93 9 0 chr17 1644765 1644979 -83793501 - AluSq SINE Alu -11 302 87 1003 167 0 22 chr17 1645082 1645262 -83793218 + AluSg/x SINE Alu 119 294 -16 1767 168 3 0 chr17 1645323 1645621 -83792859 - AluJb SINE Alu -13 299 1 338 287 103 51 chr17 1645621 1645952 -83792528 + HAL1 LINE L1 25 372 -2135 1933 123 0 16 chr17 1645955 1646264 -83792216 + AluSc SINE Alu 1 304 -5 430 284 83 33 chr17 1646265 1646583 -83791897 + L1MC/D LINE L1 5386 5714 -448 2073 79 7 4 chr17 1646714 1647028 -83791452 + AluSx SINE Alu 1 315 0 233 151 0 38 chr17 1647112 1647140 -83791340 + A-rich Low_complexity Low_complexity 5 32 -23 2296 86 3 3 chr17 1647140 1647453 -83791027 + AluSq SINE Alu 1 313 0 233 151 0 38 chr17 1647453 1647477 -83791003 + A-rich Low_complexity Low_complexity 32 55 0 415 327 35 39 chr17 1647698 1647952 -83790528 + L1M4 LINE L1 4582 4834 -1312 2075 124 0 6 chr17 1647997 1648311 -83790169 + AluSx SINE Alu 1 312 0 1257 102 0 0 chr17 1648311 1648478 -83790002 + AluSq SINE Alu 133 299 -14 974 174 11 16 chr17 1648601 1648791 -83789689 + AluJo SINE Alu 92 280 -32 614 325 13 21 chr17 1648811 1649045 -83789435 + MIR SINE MIR 31 262 0 612 215 23 8 chr17 1649229 1649359 -83789121 - AluSg/x SINE Alu -17 295 164 1263 113 5 5 chr17 1649361 1649547 -83788933 - AluSg/x SINE Alu -8 302 117 2018 119 10 10 chr17 1649663 1649965 -83788515 - AluSx SINE Alu -10 302 1 912 133 20 137 chr17 1650025 1650280 -83788200 + AluJb SINE Alu 87 311 -1 395 129 48 0 chr17 1650600 1650662 -83787818 - AluS SINE Alu -12 289 225 681 158 0 0 chr17 1650662 1650763 -83787717 - AluS SINE Alu -212 101 1 8118 127 143 38 chr17 1650812 1652367 -83786113 - pTR5 LTR ERV1 0 2438 589 999 94 0 0 chr17 1652497 1652624 -83785856 - FLAM_C SINE Alu -6 127 1 272 274 0 0 chr17 1652716 1652778 -83785702 - MIR3 SINE MIR -33 175 114 395 218 118 9 chr17 1652784 1652894 -83785586 - L1M4 LINE L1 -2553 3593 3472 1195 131 4 79 chr17 1653038 1653267 -83785213 + AluSx SINE Alu 1 212 -100 1007 104 0 146 chr17 1653367 1653579 -83784901 + AluJb SINE Alu 125 305 -7 517 348 146 29 chr17 1653588 1654274 -83784206 - L2 LINE L2 -727 2587 1822 1640 152 14 18 chr17 1654274 1654589 -83783891 + AluJo SINE Alu 1 314 0 1529 177 29 35 chr17 1654646 1654827 -83783653 + L1MB2 LINE L1 5651 5832 -339 2167 81 0 37 chr17 1654827 1655150 -83783330 + AluSx SINE Alu 1 311 -1 1529 177 29 35 chr17 1655150 1655395 -83783085 + L1MB2 LINE L1 5832 6171 0 622 164 95 0 chr17 1655667 1655783 -83782697 - FLAM_C SINE Alu 0 143 17 1200 103 0 0 chr17 1655925 1656090 -83782390 + AluSq SINE Alu 1 165 -148 1413 77 31 15 chr17 1656106 1656302 -83782178 + AluSg/x SINE Alu 99 297 -13 377 260 46 51 chr17 1656412 1656608 -83781872 + L1MC4a LINE L1 5711 5905 -1903 2381 66 0 0 chr17 1658146 1658449 -83780031 + AluY SINE Alu 1 303 -8 22 0 0 0 chr17 1658453 1658475 -83780005 + AT_rich Low_complexity Low_complexity 1 22 0 2401 42 0 0 chr17 1658482 1658788 -83779692 + AluY SINE Alu 1 306 0 263 273 68 45 chr17 1659052 1659162 -83779318 - MIR SINE MIR -78 184 69 2145 94 0 25 chr17 1659162 1659480 -83779000 + AluSg SINE Alu 1 310 0 263 273 68 45 chr17 1659480 1659501 -83778979 - MIR SINE MIR -193 69 50 378 183 16 0 chr17 1659765 1659850 -83778630 - L1P3 LINE L1 -402 5752 5664 442 188 20 2 chr17 1659866 1660117 -83778363 + AluJo SINE Alu 1 295 -17 636 250 152 62 chr17 1660364 1660520 -83777960 + Charlie8 DNA MER1_type 63 204 -2213 691 179 0 15 chr17 1660520 1660654 -83777826 - FLAM_C SINE Alu 0 133 2 636 250 152 62 chr17 1660654 1660865 -83777615 + Charlie8 DNA MER1_type 204 463 -1954 2312 55 3 0 chr17 1660865 1661155 -83777325 - AluSg SINE Alu -19 291 1 1743 161 3 0 chr17 1661184 1661469 -83777011 - AluSx SINE Alu -26 286 1 1243 88 83 6 chr17 1661875 1662056 -83776424 + MER30 DNA MER1_type 1 195 -35 2274 99 0 16 chr17 1662533 1662846 -83775634 + AluSg SINE Alu 1 308 -2 2077 94 17 14 chr17 1663556 1663853 -83774627 - AluSx SINE Alu -14 298 1 193 263 0 0 chr17 1663855 1663893 -83774587 - MIR SINE MIR -78 184 147 318 219 113 86 chr17 1663928 1663966 -83774514 + MER58B DNA MER1_type 4 40 -301 1495 159 21 10 chr17 1663966 1664255 -83774225 - AluJb SINE Alu -20 292 1 318 219 113 86 chr17 1664255 1664367 -83774113 + MER58B DNA MER1_type 40 158 -183 28 29 0 0 chr17 1664371 1664406 -83774074 + AT_rich Low_complexity Low_complexity 1 35 0 298 85 85 0 chr17 1664408 1664455 -83774025 + MER58B DNA MER1_type 150 200 -141 180 0 0 0 chr17 1664495 1664515 -83773965 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 21 36 0 0 chr17 1665336 1665364 -83773116 + AT_rich Low_complexity Low_complexity 1 28 0 1620 143 24 14 chr17 1665367 1665654 -83772826 - AluJo SINE Alu -9 303 14 525 173 136 0 chr17 1665675 1665785 -83772695 + MER58B DNA MER1_type 217 341 0 1222 192 4 54 chr17 1665951 1666211 -83772269 - AluJo SINE Alu -43 269 23 1739 115 64 3 chr17 1666336 1666632 -83771848 - MER2 DNA MER2_type 0 345 32 2155 103 0 0 chr17 1666784 1667084 -83771396 - AluSg SINE Alu -10 300 1 2166 154 26 48 chr17 1667650 1668065 -83770415 - MLT2D LTR ERVL -8 406 1 2305 53 0 33 chr17 1668127 1668427 -83770053 + AluY SINE Alu 1 290 -21 1830 120 0 37 chr17 1668981 1669280 -83769200 + AluSx SINE Alu 1 288 -24 2078 97 0 7 chr17 1669312 1669601 -83768879 + AluSg SINE Alu 1 287 -23 560 178 0 0 chr17 1669940 1670041 -83768439 + AluSg/x SINE Alu 201 301 -8 2263 85 3 13 chr17 1670307 1670614 -83767866 + AluSx SINE Alu 1 312 0 1593 169 3 3 chr17 1671356 1671646 -83766834 - AluJb SINE Alu -22 290 1 1314 189 13 60 chr17 1671648 1671807 -83766673 - AluJo SINE Alu -14 288 148 1987 125 7 7 chr17 1671807 1672112 -83766368 - AluSx SINE Alu -7 305 1 1314 189 13 60 chr17 1672112 1672253 -83766227 - AluJo SINE Alu -154 148 2 544 126 0 172 chr17 1672265 1672416 -83766064 - FLAM_C SINE Alu -7 126 2 374 247 96 48 chr17 1672504 1672670 -83765810 - MIR SINE MIR -48 214 41 2355 70 0 6 chr17 1672899 1673212 -83765268 + AluY SINE Alu 1 311 0 1394 57 0 0 chr17 1673212 1673388 -83765092 + AluSg/x SINE Alu 132 307 -2 23 33 0 0 chr17 1674050 1674080 -83764400 + GC_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr17 1674141 1674169 -83764311 + (CGG)n Simple_repeat Simple_repeat 2 29 0 285 102 51 0 chr17 1674438 1674497 -83763983 + CT-rich Low_complexity Low_complexity 1 62 0 237 200 31 15 chr17 1674656 1674721 -83763759 + CT-rich Low_complexity Low_complexity 2 67 0 26 0 0 0 chr17 1676709 1676735 -83761745 + AT_rich Low_complexity Low_complexity 1 26 0 623 284 72 32 chr17 1676793 1677031 -83761449 - MIR SINE MIR -1 261 18 694 240 147 62 chr17 1677252 1677444 -83761036 + MLT1H LTR MaLR 30 204 -345 2029 88 13 42 chr17 1677444 1677751 -83760729 + AluSq SINE Alu 1 298 -15 694 240 147 62 chr17 1677751 1677988 -83760492 + MLT1H LTR MaLR 204 533 -16 2457 54 0 0 chr17 1678143 1678441 -83760039 - AluSx SINE Alu -14 298 1 570 253 112 0 chr17 1679699 1679877 -83758603 - L2 LINE L2 -5 3308 3111 1000 199 23 14 chr17 1679880 1680096 -83758384 + AluJo SINE Alu 87 304 -8 966 151 37 55 chr17 1680392 1680610 -83757870 + L1MA4A LINE L1 6086 6299 -4 1374 126 36 138 chr17 1680665 1680830 -83757650 - AluJo SINE Alu 0 302 187 1914 103 3 72 chr17 1680830 1681150 -83757330 - AluSx SINE Alu -14 298 1 1374 126 36 138 chr17 1681150 1681318 -83757162 - AluJo SINE Alu -115 187 3 781 311 138 26 chr17 1681797 1682456 -83756024 - L2 LINE L2 -339 2975 2243 6453 65 13 41 chr17 1682619 1683595 -83754885 - SVA Other Other -5 1381 433 5414 72 24 15 chr17 1683639 1684436 -83754044 - SVA Other Other -518 868 65 225 143 54 18 chr17 1684549 1684605 -83753875 - L1M4 LINE L1 -382 5802 5745 353 231 132 52 chr17 1684609 1684836 -83753644 - L1MB7 LINE L1 -317 5867 5658 334 251 110 64 chr17 1684824 1685043 -83753437 - L1MB7 LINE L1 -314 5870 5642 * 2297 163 38 57 chr17 1685051 1685574 -83752906 - L1MB4 LINE L1 -325 5855 5343 1997 86 3 58 chr17 1685653 1685966 -83752514 - AluSq SINE Alu -17 296 1 486 307 7 7 chr17 1686220 1686357 -83752123 + MIR3 SINE MIR 47 183 -25 2262 95 0 0 chr17 1686481 1686777 -83751703 - AluSg SINE Alu -14 296 1 1267 216 36 16 chr17 1686897 1687202 -83751278 - AluJo SINE Alu -1 311 1 2088 114 19 0 chr17 1687212 1687519 -83750961 - AluSq SINE Alu 0 313 1 2240 92 0 16 chr17 1687773 1688088 -83750392 + AluSx SINE Alu 1 310 -2 1626 155 4 4 chr17 1688335 1688599 -83749881 + AluSx SINE Alu 35 298 -14 22 0 0 0 chr17 1688681 1688703 -83749777 + AT_rich Low_complexity Low_complexity 1 22 0 710 203 16 0 chr17 1688892 1689020 -83749460 + FLAM_A SINE Alu 4 133 0 480 316 163 37 chr17 1689075 1689565 -83748915 - L2 LINE L2 -2 3270 2736 277 192 0 0 chr17 1689567 1689619 -83748861 + Alu SINE Alu 247 298 -2 2518 170 62 18 chr17 1690209 1690245 -83748235 - L1MB2 LINE L1 -8 6163 6130 2226 131 129 8 chr17 1690245 1690626 -83747854 - MSTA LTR MaLR 0 428 2 2518 170 62 18 chr17 1690626 1691102 -83747378 - L1MB2 LINE L1 -41 6130 5628 1133 114 0 0 chr17 1691203 1691361 -83747119 + AluSg/x SINE Alu 138 295 -17 336 205 24 36 chr17 1691367 1691450 -83747030 - MER94 DNA DNA -52 82 1 790 303 69 69 chr17 1691461 1691970 -83746510 + L2 LINE L2 2804 3312 -1 3070 140 39 14 chr17 1692138 1692652 -83745828 - MER1A DNA MER1_type 0 527 1 277 303 8 53 chr17 1692705 1692837 -83745643 + Charlie8 DNA MER1_type 89 214 -2203 2013 125 3 0 chr17 1692846 1693142 -83745338 + AluSq SINE Alu 3 299 -14 234 257 68 14 chr17 1693191 1693265 -83745215 + MER5C DNA MER1_type 2 79 -245 368 252 121 89 chr17 1694359 1694700 -83743780 - L1M4 LINE L1 -2724 3422 2137 21 0 0 0 chr17 1694701 1694722 -83743758 + AT_rich Low_complexity Low_complexity 1 21 0 1647 141 21 34 chr17 1694722 1695013 -83743467 - AluJo SINE Alu -25 287 1 1036 277 125 49 chr17 1695083 1695270 -83743210 - HAL1b LINE L1 -463 885 714 886 163 141 0 chr17 1695270 1695454 -83743026 + MER6B DNA MER2_type 1 210 0 1036 277 125 49 chr17 1695454 1696002 -83742478 - HAL1b LINE L1 -634 714 94 437 187 122 0 chr17 1696035 1696142 -83742338 - L1MB7 LINE L1 -16 6168 6049 1865 214 156 63 chr17 1696191 1696396 -83742084 - L1MC4 LINE L1 -602 7440 7255 1673 171 0 28 chr17 1696396 1696717 -83741763 - AluSx SINE Alu 0 312 1 1865 214 156 63 chr17 1696717 1697166 -83741314 - L1MC4 LINE L1 -787 7255 6725 2254 103 3 0 chr17 1697422 1697733 -83740747 - AluSx SINE Alu 0 312 1 445 269 65 9 chr17 1697736 1697844 -83740636 - MIR SINE MIR -61 147 34 1282 189 23 36 chr17 1698167 1698493 -83739987 + AluJb SINE Alu 1 312 0 2454 188 75 30 chr17 1698588 1699162 -83739318 + L1MB7 LINE L1 5585 6184 0 543 319 87 0 chr17 1699311 1699526 -83738954 - MIR SINE MIR 0 262 24 1194 166 67 9 chr17 1700071 1700294 -83738186 + MER46A DNA MER2_type 1 236 0 21 0 0 0 chr17 1700431 1700452 -83738028 + AT_rich Low_complexity Low_complexity 1 21 0 815 112 72 0 chr17 1700452 1700577 -83737903 - AluJo SINE Alu -177 135 2 2192 107 0 0 chr17 1700666 1700964 -83737516 - AluSq SINE Alu -15 298 1 808 291 160 38 chr17 1701043 1701682 -83736798 + L2 LINE L2 1931 2647 -667 207 0 0 0 chr17 1702707 1702730 -83735750 + (GA)n Simple_repeat Simple_repeat 2 24 0 1924 89 23 0 chr17 1702735 1702994 -83735486 - AluSq SINE Alu -48 265 1 240 86 0 0 chr17 1703230 1703265 -83735215 + (T)n Simple_repeat Simple_repeat 1 35 0 1076 141 0 6 chr17 1703715 1703885 -83734595 + AluJb SINE Alu 117 285 -27 189 107 0 0 chr17 1704345 1704373 -83734107 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 512 133 0 0 chr17 1704373 1704456 -83734024 - L1M4b LINE L1 -6687 172 90 5332 142 25 66 chr17 1704467 1705510 -83732970 - L1MC1 LINE L1 -10 6323 5324 1898 155 0 0 chr17 1705510 1705806 -83732674 - AluSq SINE Alu -17 296 1 2322 72 7 0 chr17 1705826 1706130 -83732350 - AluY SINE Alu -5 306 1 237 245 0 0 chr17 1706326 1706379 -83732101 - MLT1F LTR MaLR 0 542 490 2061 122 0 10 chr17 1706383 1706694 -83731786 - AluSx SINE Alu -3 309 2 1482 200 3 27 chr17 1706749 1707049 -83731431 - AluJo SINE Alu -19 293 1 1138 245 50 7 chr17 1707049 1707324 -83731156 - MLT1F LTR MaLR -41 501 212 436 215 0 0 chr17 1707315 1707394 -83731086 - MLT1F LTR MaLR -472 95 17 * 1699 172 89 3 chr17 1707394 1707708 -83730772 - MER7A DNA MER2_type 0 346 8 2157 101 0 7 chr17 1707922 1708219 -83730261 + AluSg SINE Alu 1 295 -15 26 50 0 0 chr17 1708260 1708300 -83730180 + AT_rich Low_complexity Low_complexity 1 40 0 534 223 9 18 chr17 1708300 1708412 -83730068 - FLAM_A SINE Alu -27 115 5 286 122 37 183 chr17 1708463 1708545 -83729935 - MER2 DNA MER2_type -3 342 273 1600 150 36 39 chr17 1708549 1708856 -83729624 + AluJb SINE Alu 7 312 0 864 186 69 0 chr17 1708885 1709073 -83729407 - MER2 DNA MER2_type -136 209 9 384 310 76 25 chr17 1709085 1709282 -83729198 - MLT1K LTR MaLR -34 554 348 2190 106 0 7 chr17 1709435 1709738 -83728742 - AluSx SINE Alu -11 301 1 1500 144 0 32 chr17 1709786 1710064 -83728416 - AluSx SINE Alu -33 279 11 2230 83 0 16 chr17 1710086 1710398 -83728082 - AluY SINE Alu -4 307 1 1858 157 23 17 chr17 1710401 1710926 -83727554 - L1M4 LINE L1 -692 5486 4958 1743 110 27 40 chr17 1711523 1711823 -83726657 - AluSq SINE Alu -17 296 1 1925 131 0 19 chr17 1711908 1712222 -83726258 + AluSg SINE Alu 1 308 -2 2559 169 61 21 chr17 1712803 1712839 -83725641 - L1MB2 LINE L1 -8 6163 6130 2137 130 128 16 chr17 1712839 1713223 -83725257 - MSTA LTR MaLR 0 428 2 2559 169 61 21 chr17 1713223 1713708 -83724772 - L1MB2 LINE L1 -41 6130 5621 2200 93 0 7 chr17 1713801 1714103 -83724377 + AluSx SINE Alu 1 300 -12 1606 143 0 44 chr17 1714286 1714611 -83723869 - AluSx SINE Alu 0 312 1 2283 89 0 3 chr17 1714777 1715080 -83723400 - AluSp SINE Alu -11 302 1 2060 97 3 7 chr17 1715677 1715967 -83722513 - AluSp SINE Alu -24 289 1 235 234 206 28 chr17 1716316 1716423 -83722057 - MIR SINE MIR -66 142 17 2060 127 3 0 chr17 1716586 1716885 -83721595 + AluJb SINE Alu 3 302 -10 243 61 0 0 chr17 1716950 1716983 -83721497 + (TG)n Simple_repeat Simple_repeat 2 34 0 1472 173 0 14 chr17 1716983 1717261 -83721219 - AluSx SINE Alu -34 278 5 24 0 0 0 chr17 1717270 1717294 -83721186 + AT_rich Low_complexity Low_complexity 1 24 0 1689 188 0 0 chr17 1717516 1717803 -83720677 + AluJb SINE Alu 1 287 -25 263 186 129 0 chr17 1717854 1717924 -83720556 + MIR SINE MIR 125 203 -59 2153 93 0 17 chr17 1717971 1718272 -83720208 - AluSx SINE Alu -16 296 1 2349 54 0 22 chr17 1718334 1718647 -83719833 - AluY SINE Alu -5 306 1 830 180 56 11 chr17 1718739 1718917 -83719563 + AluSg/x SINE Alu 121 306 -6 1533 159 29 14 chr17 1718934 1719211 -83719269 + AluJo SINE Alu 3 283 -29 194 0 0 37 chr17 1719692 1719719 -83718761 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1667 164 0 17 chr17 1719719 1720009 -83718471 - AluJb SINE Alu -25 287 1 2211 90 7 3 chr17 1720321 1720621 -83717859 + AluSx SINE Alu 1 301 -11 1115 121 0 6 chr17 1720625 1720791 -83717689 + AluSg/x SINE Alu 138 302 -10 1996 119 3 10 chr17 1720846 1721149 -83717331 + AluSx SINE Alu 1 301 -11 1746 214 107 137 chr17 1721472 1722567 -83715913 + L1MC4 LINE L1 6698 7820 -222 1951 118 3 19 chr17 1722567 1722880 -83715600 + AluSx SINE Alu 5 312 0 1746 214 107 137 chr17 1722880 1723094 -83715386 + L1MC4 LINE L1 7820 8039 -3 1925 133 31 0 chr17 1723573 1723866 -83714614 - AluJb SINE Alu -10 302 1 1937 120 7 13 chr17 1724082 1724391 -83714089 - AluSx SINE Alu -2 310 4 2294 225 130 15 chr17 1725191 1726021 -83712459 - L1ME1 LINE L1 -40 6195 5238 603 217 80 6 chr17 1726037 1726212 -83712268 - L1ME1 LINE L1 -1278 4937 4750 812 164 0 0 chr17 1726232 1726360 -83712120 + FLAM_C SINE Alu 1 128 -15 1089 193 162 9 chr17 1726361 1726682 -83711798 - L1ME1 LINE L1 -1459 4756 4387 1756 73 0 0 chr17 1726694 1726914 -83711566 - AluSc SINE Alu -10 299 80 322 91 0 45 chr17 1726914 1726980 -83711500 + (T)n Simple_repeat Simple_repeat 1 63 0 5775 52 10 24 chr17 1726980 1727786 -83710694 - SVA Other Other 0 1386 592 1199 82 27 50 chr17 1727857 1728283 -83710197 - SVA Other Other -520 866 635 4554 87 60 59 chr17 1728312 1729128 -83709352 - SVA Other Other -520 866 50 297 0 0 0 chr17 1729134 1729167 -83709313 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 645 144 0 0 chr17 1729167 1729257 -83709223 - AluSc SINE Alu -218 91 2 2027 190 21 104 chr17 1729262 1729915 -83708565 - L1ME1 LINE L1 -1818 4397 3799 30 0 0 0 chr17 1729934 1729964 -83708516 + AT_rich Low_complexity Low_complexity 1 30 0 2018 125 0 3 chr17 1729964 1730253 -83708227 - AluSx SINE Alu -18 294 7 333 108 15 0 chr17 1730279 1730344 -83708136 - L1MA7 LINE L1 0 6291 6226 1146 150 120 45 chr17 1730344 1730611 -83707869 - MER7C DNA MER2_type 0 603 317 919 110 0 15 chr17 1730613 1730749 -83707731 + AluY SINE Alu 1 134 -177 1916 111 0 20 chr17 1730749 1731055 -83707425 + AluSx SINE Alu 1 300 -12 1824 153 32 29 chr17 1731055 1731281 -83707199 - MER7C DNA MER2_type -2714 314 84 1651 119 60 11 chr17 1731281 1731588 -83706892 - AluSx SINE Alu 0 320 1 1824 153 32 29 chr17 1731588 1731673 -83706807 - MER7C DNA MER2_type -2944 84 1 1031 150 79 22 chr17 1731673 1731900 -83706580 - L1MA7 LINE L1 -64 6227 5988 781 197 31 44 chr17 1731901 1731975 -83706505 - L1ME1 LINE L1 -2403 3812 3739 2067 89 0 48 chr17 1731975 1732291 -83706189 + AluY SINE Alu 1 301 -10 781 197 31 44 chr17 1732291 1732444 -83706036 - L1ME1 LINE L1 -2476 3739 3588 1787 106 66 15 chr17 1732510 1732783 -83705697 + AluSg SINE Alu 7 293 -17 954 161 12 0 chr17 1732783 1732945 -83705535 + AluSg/x SINE Alu 134 297 -15 660 219 85 83 chr17 1732945 1733320 -83705160 - L1ME1 LINE L1 -2685 3530 3155 * 700 313 53 22 chr17 1733312 1733635 -83704845 - L1ME1 LINE L1 -6033 363 31 180 0 0 0 chr17 1734003 1734023 -83704457 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1725 196 56 39 chr17 1734332 1734746 -83703734 - L1PB4 LINE L1 -3 6153 5733 1825 153 7 7 chr17 1734757 1735098 -83703382 - AluJo SINE Alu 0 345 5 266 176 0 27 chr17 1735130 1735204 -83703276 - L1PB4 LINE L1 -1101 5045 4974 1134 202 4 50 chr17 1735210 1735244 -83703236 - AluJo SINE Alu -10 302 268 2304 65 0 3 chr17 1735244 1735537 -83702943 + AluSc SINE Alu 1 292 -17 1134 202 4 50 chr17 1735537 1735760 -83702720 - AluJo SINE Alu -44 268 57 811 151 8 8 chr17 1735760 1735886 -83702594 - FLAM_C SINE Alu -16 127 2 22 35 0 0 chr17 1735991 1736020 -83702460 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr17 1736137 1736168 -83702312 + AT_rich Low_complexity Low_complexity 1 31 0 208 352 46 0 chr17 1736184 1736292 -83702188 - MIR3 SINE MIR -52 156 44 1548 166 0 27 chr17 1736383 1736679 -83701801 + AluJo SINE Alu 1 288 -24 2110 84 30 7 chr17 1737005 1737302 -83701178 + AluSx SINE Alu 1 304 -8 2050 126 7 0 chr17 1737954 1738263 -83700217 + AluSx SINE Alu 1 311 -1 1761 131 0 45 chr17 1738625 1738937 -83699543 + AluJb SINE Alu 3 300 -12 1757 109 6 61 chr17 1741322 1741634 -83696846 + AluSx SINE Alu 1 295 -17 195 306 0 48 chr17 1742230 1742292 -83696188 - MIR SINE MIR -194 68 10 678 159 102 68 chr17 1742892 1743068 -83695412 + MIR SINE MIR 81 262 0 557 104 104 0 chr17 1743170 1743266 -83695214 + MER85 DNA T2_type 1 106 -33 1589 165 7 23 chr17 1743267 1743570 -83694910 - AluJb SINE Alu -14 298 1 2009 100 0 32 chr17 1743607 1743916 -83694564 + AluY SINE Alu 1 299 -12 1372 203 120 49 chr17 1744134 1744619 -83693861 + L1ME3A LINE L1 5362 5881 -289 1942 124 0 10 chr17 1744620 1744911 -83693569 + AluSq SINE Alu 1 288 -25 30 0 0 0 chr17 1744911 1744941 -83693539 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr17 1745113 1745149 -83693331 + AT_rich Low_complexity Low_complexity 1 36 0 2390 38 0 19 chr17 1745152 1745465 -83693015 + AluY SINE Alu 1 307 -4 1141 153 16 0 chr17 1745573 1745756 -83692724 + AluJo SINE Alu 110 295 -17 2080 75 0 24 chr17 1745770 1746065 -83692415 + AluSx SINE Alu 11 298 -14 1335 163 19 141 chr17 1746070 1746390 -83692090 - L1MC5 LINE L1 -628 7333 6976 2053 97 35 0 chr17 1746390 1746679 -83691801 + AluSx SINE Alu 1 299 -13 1335 163 19 141 chr17 1746679 1746727 -83691753 - L1MC5 LINE L1 -985 6976 7016 2247 91 3 3 chr17 1746727 1747035 -83691445 + AluSp SINE Alu 5 312 -1 1335 163 19 141 chr17 1747035 1747077 -83691403 - L1MC5 LINE L1 -944 7017 6972 912 101 0 43 chr17 1747128 1747266 -83691214 - FLAM_C SINE Alu 0 133 2 351 0 0 0 chr17 1747278 1747317 -83691163 + (TA)n Simple_repeat Simple_repeat 1 39 0 852 55 0 0 chr17 1747324 1747434 -83691046 - AluYa5/8 SINE Alu 0 310 201 861 254 74 32 chr17 1747449 1747760 -83690720 - L1MC4 LINE L1 -1018 7024 6701 282 206 0 0 chr17 1747800 1747863 -83690617 + CT-rich Low_complexity Low_complexity 5 67 0 924 143 0 26 chr17 1747896 1748050 -83690430 - AluJb SINE Alu -161 151 2 790 150 0 16 chr17 1748148 1748275 -83690205 + FLAM_A SINE Alu 8 132 -10 313 253 82 77 chr17 1748652 1748725 -83689755 - L1MC4a LINE L1 -1754 6054 5983 1688 142 0 41 chr17 1748725 1749041 -83689439 - AluSx SINE Alu -9 303 1 313 253 82 77 chr17 1749041 1749135 -83689345 - L1MC4a LINE L1 -1825 5983 5883 2171 102 0 10 chr17 1749135 1749448 -83689032 - AluSg SINE Alu 0 310 1 313 253 82 77 chr17 1749448 1749461 -83689019 - L1MC4a LINE L1 -1925 5883 5872 647 216 0 24 chr17 1749541 1749666 -83688814 + FLAM_A SINE Alu 1 122 -11 1396 151 0 4 chr17 1749996 1750221 -83688259 + AluJb SINE Alu 84 307 -5 189 0 0 0 chr17 1750272 1750293 -83688187 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2183 94 0 3 chr17 1750941 1751238 -83687242 - AluY SINE Alu -15 296 1 402 204 0 11 chr17 1751359 1751447 -83687033 + AluJ/FLAM SINE Alu 6 92 -220 2461 0 0 14 chr17 1751494 1751823 -83686657 + AluYa5 SINE Alu 1 325 0 378 0 0 0 chr17 1752609 1752651 -83685829 + (CA)n Simple_repeat Simple_repeat 2 43 0 1315 112 12 89 chr17 1752902 1753240 -83685240 - AluSx SINE Alu 0 312 1 1864 85 48 7 chr17 1753272 1753566 -83684914 + AluSc SINE Alu 1 305 0 1983 98 0 77 chr17 1753590 1753917 -83684563 - AluSq SINE Alu -10 303 2 192 312 33 44 chr17 1754423 1754539 -83683941 + MIR SINE MIR 15 129 -79 1286 219 0 7 chr17 1754589 1754872 -83683608 - AluJo SINE Alu -15 297 17 186 133 0 0 chr17 1755276 1755306 -83683174 + (T)n Simple_repeat Simple_repeat 1 30 0 1841 120 3 20 chr17 1757383 1757682 -83680798 - AluSq SINE Alu -19 294 1 243 0 0 0 chr17 1757767 1757794 -83680686 + (TG)n Simple_repeat Simple_repeat 2 28 0 436 254 135 44 chr17 1758144 1758396 -83680084 - L1ME4a LINE L1 -2 6119 5845 2095 88 20 7 chr17 1758633 1758938 -83679542 + AluSx SINE Alu 1 309 -3 319 255 98 72 chr17 1759886 1760039 -83678441 - L1ME4a LINE L1 -3 6118 5962 2263 83 0 13 chr17 1760221 1760534 -83677946 + AluSg SINE Alu 1 309 -1 255 230 23 69 chr17 1762001 1762088 -83676392 - MIR SINE MIR -133 129 47 2096 55 4 11 chr17 1762441 1762716 -83675764 + AluSx SINE Alu 1 273 -39 21 43 0 0 chr17 1762905 1762928 -83675552 + AT_rich Low_complexity Low_complexity 1 23 0 1941 102 10 14 chr17 1763435 1763730 -83674750 - AluSq SINE Alu -19 294 1 2049 92 3 22 chr17 1763842 1764158 -83674322 + AluSx SINE Alu 1 310 -2 532 287 14 0 chr17 1764164 1764307 -83674173 - Charlie8 DNA MER1_type -2196 221 77 1711 171 0 13 chr17 1764328 1764637 -83673843 + AluJb SINE Alu 1 305 -7 190 246 0 18 chr17 1764856 1764913 -83673567 - L3 LINE CR1 -377 1200 1145 2126 108 0 3 chr17 1765403 1765709 -83672771 - AluSc SINE Alu -4 305 1 2124 49 3 21 chr17 1765735 1766059 -83672421 - AluY SINE Alu 0 320 2 2099 85 10 7 chr17 1766084 1766379 -83672101 + AluSp SINE Alu 1 296 -17 621 165 0 10 chr17 1766415 1766518 -83671962 + FLAM_C SINE Alu 2 103 -40 2314 100 0 0 chr17 1766653 1766963 -83671517 - AluSx SINE Alu -2 310 1 2192 98 0 3 chr17 1766965 1767262 -83671218 - AluSq SINE Alu -17 296 1 302 231 29 19 chr17 1767523 1767627 -83670853 - MIR SINE MIR -77 131 27 613 56 0 0 chr17 1767734 1767827 -83670653 + AluSp/q SINE Alu 212 304 0 28 0 0 0 chr17 1767858 1767886 -83670594 + AT_rich Low_complexity Low_complexity 1 28 0 382 258 147 12 chr17 1767886 1768049 -83670431 + L1 LINE L1 3766 3950 -2196 2339 89 0 0 chr17 1768331 1768635 -83669845 - AluSg SINE Alu -6 304 1 2221 79 6 29 chr17 1768886 1769202 -83669278 - AluY SINE Alu -2 309 1 2141 150 70 20 chr17 1769202 1769601 -83668879 + L1MD1 LINE L1 5582 6000 -359 819 171 7 7 chr17 1769604 1769756 -83668724 + L1MD1 LINE L1 6084 6235 -7 1173 108 12 0 chr17 1769758 1769925 -83668555 - AluSq SINE Alu -15 298 130 2063 99 0 48 chr17 1770315 1770629 -83667851 - AluSq SINE Alu -14 299 1 292 208 24 112 chr17 1770668 1770793 -83667687 - L2 LINE L2 -936 2378 2265 183 167 0 0 chr17 1770801 1770831 -83667649 + MIR SINE MIR 92 121 -141 615 282 81 26 chr17 1771040 1771274 -83667206 + Charlie8 DNA MER1_type 26 272 -2145 621 167 19 0 chr17 1771302 1771410 -83667070 - L1MB5 LINE L1 -6 6168 6059 1610 122 0 8 chr17 1771411 1771657 -83666823 - AluSx SINE Alu -10 302 59 1079 93 10 62 chr17 1771758 1771894 -83666586 - L1MC/D LINE L1 -892 5467 5342 2048 117 0 0 chr17 1771894 1772184 -83666296 - AluSx SINE Alu -22 290 1 1079 93 10 62 chr17 1772184 1772240 -83666240 - L1MC/D LINE L1 -1017 5342 5285 2841 159 28 47 chr17 1772248 1772850 -83665630 - L1MB7 LINE L1 0 6184 5594 277 182 36 0 chr17 1772850 1772905 -83665575 - L1M4 LINE L1 -534 5650 5594 265 295 0 0 chr17 1772901 1772962 -83665518 - L1M4 LINE L1 -530 5654 5594 * 330 206 7 0 chr17 1772945 1773018 -83665462 - L1M3 LINE L1 -510 5670 5595 339 223 30 5 chr17 1773021 1773143 -83665337 - L1M1 LINE L1 -510 5670 5582 * 926 218 14 45 chr17 1773118 1773338 -83665142 - L1M4 LINE L1 -506 5668 5456 863 71 0 0 chr17 1773438 1773536 -83664944 - AluSq/x SINE Alu -186 126 29 180 97 0 0 chr17 1774169 1774200 -83664280 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1681 159 3 14 chr17 1774202 1774485 -83663995 - AluSx SINE Alu -30 282 3 427 94 0 0 chr17 1774602 1774666 -83663814 + Alu SINE Alu 236 299 -12 183 385 13 0 chr17 1774880 1774958 -83663522 - L2 LINE L2 -55 3258 3180 917 219 40 4 chr17 1775383 1775634 -83662846 - L1MB3 LINE L1 0 6183 5924 576 200 77 0 chr17 1775637 1775767 -83662713 - MER46A DNA MER2_type 0 236 97 1153 74 0 0 chr17 1775767 1775902 -83662578 + AluSq/x SINE Alu 1 135 -177 2277 116 3 0 chr17 1775902 1776204 -83662276 + AluSx SINE Alu 1 303 -9 592 162 0 0 chr17 1776204 1776303 -83662177 - MER46A DNA MER2_type -132 104 6 2026 98 0 4 chr17 1776429 1776684 -83661796 - AluSx SINE Alu -58 254 1 807 154 7 0 chr17 1776684 1776820 -83661660 + MLT1D LTR MaLR 367 503 -2 2158 97 49 3 chr17 1777262 1777550 -83660930 - AluSx SINE Alu -11 301 1 1447 97 181 30 chr17 1777815 1778114 -83660366 + THE1C LTR MaLR 7 350 -25 665 206 23 0 chr17 1778315 1778446 -83660034 + MER44D DNA MER2_type 600 605 0 275 278 17 17 chr17 1778446 1778561 -83659919 - L1M4 LINE L1 -2399 3747 3633 2564 81 0 7 chr17 1778580 1778890 -83659590 - AluSx SINE Alu -4 308 1 450 308 67 33 chr17 1779255 1779554 -83658926 + L1MC/D LINE L1 5493 5801 -320 373 210 0 27 chr17 1779555 1779662 -83658818 + AluS SINE Alu 2 84 -219 767 217 54 12 chr17 1780335 1780501 -83657979 - MER63A DNA MER1_type -37 173 1 23 0 0 0 chr17 1781401 1781424 -83657056 + AT_rich Low_complexity Low_complexity 1 23 0 1084 222 0 9 chr17 1781833 1782058 -83656422 - MER58A DNA MER1_type 0 224 2 228 185 11 179 chr17 1782067 1782215 -83656265 + MER113 DNA MER1_type? 1 114 -407 2349 91 13 3 chr17 1782215 1782524 -83655956 - AluSp SINE Alu 0 313 2 228 185 11 179 chr17 1782524 1782559 -83655921 + MER113 DNA MER1_type? 114 153 -368 1874 125 96 0 chr17 1784100 1784380 -83654100 - AluSx SINE Alu -5 307 1 201 74 0 0 chr17 1785068 1785095 -83653385 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 1147 307 60 73 chr17 1785389 1785596 -83652884 - L1M4 LINE L1 -2292 3854 3646 1474 88 206 88 chr17 1785596 1785868 -83652612 - AluSq SINE Alu -9 304 1 1147 307 60 73 chr17 1785868 1786423 -83652057 - L1M4 LINE L1 -2500 3646 3102 283 224 75 0 chr17 1786506 1786573 -83651907 - MIR SINE MIR -85 177 106 740 186 8 0 chr17 1786631 1786760 -83651720 - FLAM_C SINE Alu 0 133 4 337 308 28 41 chr17 1786767 1787085 -83651395 - L1M4 LINE L1 -3104 3042 2729 2023 142 17 0 chr17 1787169 1787458 -83651022 - AluJb SINE Alu -18 294 1 1058 284 83 11 chr17 1787464 1787907 -83650573 + L1MC/D LINE L1 5287 5761 -2047 1719 103 0 0 chr17 1787913 1788136 -83650344 - AluSg/x SINE Alu -1 311 89 477 130 0 0 chr17 1788236 1788305 -83650175 - AluS SINE Alu -243 70 2 837 228 92 13 chr17 1788353 1788581 -83649899 - MIR SINE MIR -1 261 16 196 196 0 54 chr17 1790307 1790419 -83648061 + G-rich Low_complexity Low_complexity 3 108 0 1894 75 0 17 chr17 1790605 1790846 -83647634 - AluSq SINE Alu -76 237 1 733 294 73 39 chr17 1790846 1791645 -83646835 - L1MEd LINE L1 -2867 3262 2437 426 275 72 4 chr17 1792192 1792428 -83646052 - L1MEd LINE L1 -3759 2370 2119 2184 123 7 13 chr17 1792442 1792752 -83645728 - AluSx SINE Alu -4 308 1 202 222 25 49 chr17 1792781 1792862 -83645618 + T-rich Low_complexity Low_complexity 2 80 0 252 339 87 32 chr17 1793185 1793326 -83645154 - HAL1b LINE L1 -702 646 487 2445 77 0 26 chr17 1793326 1793639 -83644841 - AluY SINE Alu -6 305 1 252 339 87 32 chr17 1793639 1793715 -83644765 - HAL1b LINE L1 -861 487 417 23 54 0 0 chr17 1793772 1793809 -83644671 + AT_rich Low_complexity Low_complexity 1 37 0 519 299 54 9 chr17 1793870 1794094 -83644386 - L1MEd LINE L1 -4898 1221 988 219 335 112 29 chr17 1794130 1794157 -83644323 + L2 LINE L2 2661 2684 -630 2250 124 0 0 chr17 1794157 1794464 -83644016 - AluSq SINE Alu -5 308 2 219 335 112 29 chr17 1794464 1794606 -83643874 + L2 LINE L2 2684 2844 -470 285 167 0 0 chr17 1794826 1794874 -83643606 - Alu SINE Alu -247 52 5 2323 63 14 3 chr17 1796786 1797072 -83641408 - AluSx SINE Alu -23 289 1 189 74 0 0 chr17 1798537 1798564 -83639916 + (ATG)n Simple_repeat Simple_repeat 2 28 0 237 297 51 93 chr17 1798616 1798704 -83639776 - MIR SINE MIR -65 143 60 2393 87 3 13 chr17 1798704 1799013 -83639467 + AluSg SINE Alu 1 306 -4 237 297 51 93 chr17 1799013 1799042 -83639438 - MIR SINE MIR -148 60 31 280 355 11 0 chr17 1799158 1799251 -83639229 - MIR SINE MIR -60 148 55 231 193 35 0 chr17 1799524 1799581 -83638899 + T-rich Low_complexity Low_complexity 2 60 0 228 154 0 0 chr17 1799706 1799758 -83638722 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 467 266 140 70 chr17 1799815 1800338 -83638142 - L1MEc LINE L1 -3574 2641 2119 2317 85 0 10 chr17 1801540 1801835 -83636645 - AluY SINE Alu -19 292 1 252 333 43 11 chr17 1802630 1802723 -83635757 + L2 LINE L2 3168 3263 -9 604 291 28 14 chr17 1803553 1803766 -83634714 - MIR SINE MIR -33 229 14 214 200 186 0 chr17 1803936 1804006 -83634474 + MER5A DNA MER1_type 85 167 -22 201 167 19 56 chr17 1804521 1804575 -83633905 + C-rich Low_complexity Low_complexity 2 53 0 2375 100 7 0 chr17 1805151 1805460 -83633020 - AluSx SINE Alu -1 311 1 316 311 8 42 chr17 1805464 1805583 -83632897 - MIR SINE MIR -101 161 47 414 263 68 8 chr17 1805630 1805748 -83632732 + MIR3 SINE MIR 30 154 -54 325 266 79 79 chr17 1806588 1806765 -83631715 + MIR SINE MIR 15 191 -71 2634 62 0 0 chr17 1808150 1808457 -83630023 - AluY SINE Alu -4 307 1 451 326 59 0 chr17 1809249 1809470 -83629010 + L1MC/D LINE L1 5567 5800 -2008 * 756 261 22 14 chr17 1809458 1809734 -83628746 + L1MB5 LINE L1 3334 3611 -2535 * 2579 205 31 7 chr17 1809713 1810407 -83628073 + L1MB5 LINE L1 5182 5890 -284 2252 96 0 0 chr17 1810412 1810737 -83627743 + AluSg SINE Alu 1 325 0 378 211 0 10 chr17 1810797 1810900 -83627580 + L1M4 LINE L1 5597 5694 -470 2151 38 0 0 chr17 1810900 1811139 -83627341 + AluY SINE Alu 1 239 -72 2262 109 3 0 chr17 1812872 1813174 -83625306 + AluSx SINE Alu 2 304 -8 2287 121 3 0 chr17 1813249 1813556 -83624924 - AluSq SINE Alu -5 308 1 299 284 78 23 chr17 1813928 1814101 -83624379 + MIR SINE MIR 3 184 -61 289 303 215 46 chr17 1815063 1815324 -83623156 + L2 LINE L2 2966 3270 -2 317 246 0 0 chr17 1815665 1815734 -83622746 - MIR SINE MIR -79 129 61 1348 19 0 0 chr17 1815993 1816155 -83622325 + L1PA4 LINE L1 5994 6155 0 231 292 21 21 chr17 1816416 1816512 -83621968 + MIR SINE MIR 21 116 -92 2224 81 4 0 chr17 1816669 1816942 -83621538 - AluSp SINE Alu -39 274 1 1081 82 0 7 chr17 1816942 1817077 -83621403 - AluSq/x SINE Alu -179 134 1 2202 130 0 0 chr17 1817096 1817388 -83621092 - AluSx SINE Alu -20 292 1 581 265 24 30 chr17 1817406 1817455 -83621025 + MIR SINE MIR 98 146 -116 2483 139 12 21 chr17 1817455 1817526 -83620954 - MSTA LTR MaLR 0 428 358 2415 105 3 0 chr17 1817526 1817830 -83620650 + AluSg SINE Alu 1 305 -5 2483 139 12 21 chr17 1817830 1818190 -83620290 - MSTA LTR MaLR -70 358 1 581 265 24 30 chr17 1818190 1818306 -83620174 + MIR SINE MIR 146 262 0 2490 81 7 0 chr17 1819064 1819373 -83619107 - AluSx SINE Alu -1 311 1 1233 128 35 62 chr17 1819376 1819602 -83618878 - AluJo SINE Alu -7 305 86 350 305 114 0 chr17 1819917 1820022 -83618458 + MIR SINE MIR 76 192 -70 457 210 16 113 chr17 1820494 1820564 -83617916 - MLT1C LTR MaLR -3 464 456 2259 113 0 10 chr17 1820564 1820875 -83617605 - AluSx SINE Alu -4 308 1 457 210 16 113 chr17 1820875 1820974 -83617506 - MLT1C LTR MaLR -11 456 349 427 230 143 53 chr17 1821127 1821392 -83617088 - MLT1C LTR MaLR -123 382 94 1272 220 9 46 chr17 1821393 1821716 -83616764 - MLT1A1 LTR MaLR 0 365 55 674 118 14 217 chr17 1822194 1822415 -83616065 - AluSg/x SINE Alu -1 308 133 2446 84 3 0 chr17 1822415 1822711 -83615769 - AluSg SINE Alu -13 297 1 2246 95 10 17 chr17 1822711 1823007 -83615473 - AluSx SINE Alu -18 294 1 879 222 116 58 chr17 1823091 1823541 -83614939 - HAL1b LINE L1 -6 1342 867 212 356 0 42 chr17 1823894 1824012 -83614468 + G-rich Low_complexity Low_complexity 2 114 0 1061 153 45 0 chr17 1824575 1824794 -83613686 + AluSg/x SINE Alu 96 322 0 1601 112 32 83 chr17 1824794 1824955 -83613525 + L1M3 LINE L1 5319 5458 -710 2150 76 6 29 chr17 1824955 1825271 -83613209 + AluSc SINE Alu 1 309 0 1601 112 32 83 chr17 1825271 1825423 -83613057 + L1M3 LINE L1 5458 5616 -552 * 4675 209 56 77 chr17 1825422 1825970 -83612510 - L1M4 LINE L1 -1191 4955 4397 2185 72 31 7 chr17 1825970 1826262 -83612218 - AluY SINE Alu -12 299 1 4675 209 56 77 chr17 1826262 1826866 -83611614 - L1M4 LINE L1 -1749 4397 3839 2099 109 3 3 chr17 1826866 1827178 -83611302 - AluSx SINE Alu 0 312 1 4675 209 56 77 chr17 1827178 1827537 -83610943 - L1M4 LINE L1 -2307 3839 3474 240 209 149 88 chr17 1827773 1827847 -83610633 - MER5A DNA MER1_type -32 157 89 2176 92 3 0 chr17 1827847 1828142 -83610338 - AluSq SINE Alu -17 296 1 240 209 149 88 chr17 1828142 1828215 -83610265 - MER5A DNA MER1_type -100 89 1 459 246 25 49 chr17 1828613 1828735 -83609745 - L2 LINE L2 -2 3311 3193 196 206 0 0 chr17 1830481 1830515 -83607965 - L2 LINE L2 -10 3262 3229 181 143 0 0 chr17 1830642 1830670 -83607810 - L2 LINE L2 -16 3256 3229 181 143 0 0 chr17 1830766 1830794 -83607686 - L2 LINE L2 -16 3256 3229 2137 123 7 0 chr17 1831131 1831439 -83607041 - AluSx SINE Alu -2 310 1 311 280 48 79 chr17 1831588 1831693 -83606787 - MIR SINE MIR -13 249 151 2331 95 0 0 chr17 1831693 1831998 -83606482 - AluSx SINE Alu -7 305 1 311 280 48 79 chr17 1831998 1832081 -83606399 - MIR SINE MIR -111 151 67 342 190 0 0 chr17 1832467 1832525 -83605955 + MLT1F1 LTR MaLR 6 63 -504 2053 125 3 0 chr17 1832530 1832826 -83605654 + AluJb SINE Alu 7 303 -9 2154 94 0 0 chr17 1832839 1833148 -83605332 + AluSx SINE Alu 1 309 0 355 298 33 50 chr17 1833396 1833620 -83604860 - L1ME LINE L1 -372 5798 5579 1962 111 7 4 chr17 1833984 1834264 -83604216 - AluSq SINE Alu -32 281 1 304 310 200 0 chr17 1834267 1834422 -83604058 - MIR SINE MIR -61 201 16 645 217 28 28 chr17 1834679 1834859 -83603621 - MER104 DNA MER2_type 0 180 1 2174 103 0 0 chr17 1835058 1835350 -83603130 + AluSx SINE Alu 1 292 -20 253 229 29 0 chr17 1835785 1835855 -83602625 - L2 LINE L2 -284 2988 2917 1746 71 4 8 chr17 1836646 1836884 -83601596 - AluSg/x SINE Alu -3 307 71 548 44 0 0 chr17 1836885 1836953 -83601527 - AluY SINE Alu -10 302 235 21 0 0 0 chr17 1836953 1836974 -83601506 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr17 1838176 1838209 -83600271 + (CA)n Simple_repeat Simple_repeat 2 34 0 2193 97 13 7 chr17 1838339 1838648 -83599832 - AluSx SINE Alu -1 311 1 262 130 0 43 chr17 1838649 1838718 -83599762 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 228 326 61 0 chr17 1840055 1840153 -83598327 - MER91A DNA MER1_type -48 148 45 1811 143 14 10 chr17 1840242 1840536 -83597944 - AluJo SINE Alu -15 297 3 240 326 22 0 chr17 1841178 1841270 -83597210 + L3b LINE CR1 1283 1376 -207 885 226 52 82 chr17 1841783 1842037 -83596443 + MLT1D LTR MaLR 1 242 -263 2483 31 0 0 chr17 1842037 1842328 -83596152 + AluY SINE Alu 1 291 -20 885 226 52 82 chr17 1842328 1842441 -83596039 + MLT1D LTR MaLR 242 357 -148 1511 90 10 0 chr17 1842541 1842742 -83595738 - THE1A LTR MaLR -152 203 1 11444 91 10 24 chr17 1842742 1843827 -83594653 - THE1A-int LTR MaLR 0 1580 481 2113 103 37 0 chr17 1843827 1844127 -83594353 - AluY SINE Alu 0 311 1 11444 91 10 24 chr17 1844127 1844200 -83594280 - THE1A-int LTR MaLR -1099 481 408 1849 108 3 42 chr17 1844200 1844507 -83593973 - AluSx SINE Alu -15 297 3 11444 91 10 24 chr17 1844507 1844950 -83593530 - THE1A-int LTR MaLR -1172 408 1 2505 114 14 0 chr17 1844950 1845300 -83593180 - THE1A LTR MaLR 0 355 1 666 185 0 0 chr17 1845303 1845411 -83593069 - FLAM_C SINE Alu -34 109 2 23 54 0 0 chr17 1845571 1845608 -83592872 + AT_rich Low_complexity Low_complexity 1 37 0 1669 140 3 57 chr17 1846213 1846528 -83591952 + AluJo SINE Alu 1 298 -14 2132 101 7 10 chr17 1846538 1846835 -83591645 + AluSx SINE Alu 1 296 -16 1979 100 0 4 chr17 1847139 1847418 -83591062 - AluSg SINE Alu -30 280 3 15218 208 16 12 chr17 1847420 1851423 -83587057 - L1PA12 LINE L1 -752 6832 2822 230 283 65 0 chr17 1851431 1851523 -83586957 + L1ME LINE L1 5727 5824 -297 2200 106 3 6 chr17 1851527 1851839 -83586641 + AluSx SINE Alu 1 311 -1 1138 282 151 10 chr17 1851842 1852431 -83586049 - L1PA12 LINE L1 -6186 1399 728 434 223 133 30 chr17 1852470 1852636 -83585844 - L1MC5 LINE L1 -37 7924 7742 828 176 0 0 chr17 1852653 1852795 -83585685 - FLAM_C SINE Alu 0 143 2 938 208 83 39 chr17 1852796 1853133 -83585347 - L1MC5 LINE L1 -232 7729 7378 1693 167 63 0 chr17 1853134 1853451 -83585029 - MER2 DNA MER2_type 0 345 9 490 134 107 9 chr17 1853460 1853572 -83584908 - L1MC5 LINE L1 -583 7378 7256 2024 127 13 0 chr17 1853728 1854035 -83584445 - AluSq SINE Alu -2 311 1 312 343 180 35 chr17 1854154 1854701 -83583779 + L2 LINE L2 1780 2467 -847 2121 99 3 7 chr17 1854701 1855003 -83583477 - AluSx SINE Alu -11 301 1 312 343 180 35 chr17 1855003 1855205 -83583275 + L2 LINE L2 2467 2638 -676 213 329 21 100 chr17 1855406 1855448 -83583032 + L2 LINE L2 3144 3188 -84 2038 106 17 0 chr17 1855448 1855741 -83582739 + AluSq SINE Alu 1 298 -15 213 329 21 100 chr17 1855741 1855838 -83582642 + L2 LINE L2 3188 3272 0 1712 147 10 17 chr17 1855922 1856222 -83582258 - AluJo SINE Alu -4 308 11 1216 173 57 83 chr17 1856385 1856685 -83581795 + AluJb SINE Alu 1 292 -20 620 160 28 0 chr17 1857017 1857123 -83581357 - AluSx SINE Alu -10 300 192 917 141 0 0 chr17 1857130 1857265 -83581215 - AluSx SINE Alu -178 135 1 1299 194 44 34 chr17 1857298 1857591 -83580889 - AluJo SINE Alu -16 296 1 290 277 0 60 chr17 1857610 1857693 -83580787 + L2 LINE L2 3185 3262 -10 1257 181 58 11 chr17 1857898 1858158 -83580322 + AluJo SINE Alu 28 299 -13 2101 106 0 7 chr17 1859072 1859373 -83579107 - AluSq SINE Alu -14 299 1 2303 74 3 0 chr17 1859466 1859763 -83578717 - AluY SINE Alu -13 298 1 2028 96 0 4 chr17 1860166 1860446 -83578034 - AluSg SINE Alu -16 294 16 22 35 0 0 chr17 1860453 1860482 -83577998 + AT_rich Low_complexity Low_complexity 1 29 0 3273 254 72 50 chr17 1860487 1861017 -83577463 - L1MD3 LINE L1 0 8042 7525 1819 124 0 4 chr17 1861017 1861283 -83577197 - AluSg SINE Alu -13 297 33 3273 254 72 50 chr17 1861283 1861700 -83576780 - L1MD3 LINE L1 -517 7525 7119 2177 96 0 34 chr17 1861700 1862023 -83576457 - AluSx SINE Alu 0 312 1 3273 254 72 50 chr17 1862023 1862442 -83576038 - L1MD3 LINE L1 -923 7119 6659 640 187 193 0 chr17 1862447 1862597 -83575883 - MER20 DNA MER1_type -5 214 36 559 297 112 29 chr17 1862639 1862805 -83575675 - L1MC4a LINE L1 -1208 6600 6449 1524 154 37 85 chr17 1862805 1863182 -83575298 + MER46B DNA MER2_type 2 235 -1 559 297 112 29 chr17 1863182 1863643 -83574837 - L1MC4a LINE L1 -1359 6449 5901 1558 127 0 95 chr17 1863645 1863983 -83574497 - AluJo SINE Alu -6 306 1 718 169 73 15 chr17 1863983 1864119 -83574361 - AluJo SINE Alu -167 145 2 1912 125 3 23 chr17 1864119 1864424 -83574056 - AluSx SINE Alu -13 299 1 1149 171 76 36 chr17 1864467 1864718 -83573762 - AluJo SINE Alu -46 266 6 485 245 12 105 chr17 1864734 1864824 -83573656 - L1MC4a LINE L1 -1926 5882 5785 2090 121 0 3 chr17 1864824 1865131 -83573349 + AluSq SINE Alu 1 306 -7 485 245 12 105 chr17 1865131 1865297 -83573183 - L1MC4a LINE L1 -2023 5785 5650 1724 169 10 0 chr17 1865529 1865825 -83572655 + AluJb SINE Alu 1 299 -13 1996 100 18 0 chr17 1865880 1866161 -83572319 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 1866161 1866189 -83572291 + (TA)n Simple_repeat Simple_repeat 2 29 0 2010 90 32 0 chr17 1866189 1866468 -83572012 - AluY SINE Alu -23 288 1 826 314 96 80 chr17 1866476 1866990 -83571490 + L1M4 LINE L1 2870 3401 -2745 1657 114 29 0 chr17 1866990 1867236 -83571244 + AluSx SINE Alu 56 308 -4 826 314 96 80 chr17 1867236 1867483 -83570997 + L1M4 LINE L1 3401 3643 -2503 1544 163 56 24 chr17 1867514 1867632 -83570848 + AluSg SINE Alu 1 114 -196 1927 107 6 50 chr17 1867632 1867949 -83570531 + AluSx SINE Alu 1 303 -9 1544 163 56 24 chr17 1867949 1868118 -83570362 + AluSg SINE Alu 114 297 -13 225 310 147 42 chr17 1868119 1868216 -83570264 + L1M4 LINE L1 3695 3780 -2366 2320 102 26 50 chr17 1868216 1868287 -83570193 - THE1C LTR MaLR 0 375 304 2124 82 7 0 chr17 1868287 1868594 -83569886 + AluY SINE Alu 1 309 0 2320 102 26 50 chr17 1868594 1868905 -83569575 - THE1C LTR MaLR -71 304 1 225 310 147 42 chr17 1868905 1868959 -83569521 + L1M4 LINE L1 3780 3827 -2319 1958 137 0 3 chr17 1868959 1869258 -83569222 + AluSx SINE Alu 1 298 -14 225 310 147 42 chr17 1869258 1869560 -83568920 + L1M4 LINE L1 3827 4197 -1949 860 138 13 38 chr17 1869638 1869797 -83568683 + AluSg/x SINE Alu 146 300 -12 1946 123 7 10 chr17 1869855 1870157 -83568323 + AluSx SINE Alu 1 301 -11 246 262 60 27 chr17 1870184 1870333 -83568147 + L1M4 LINE L1 4505 4658 -1488 24 0 0 0 chr17 1870336 1870360 -83568120 + AT_rich Low_complexity Low_complexity 1 24 0 226 189 19 0 chr17 1870592 1870645 -83567835 + L1M4 LINE L1 5115 5168 -978 913 165 215 58 chr17 1870667 1870794 -83567686 + AluJb SINE Alu 1 107 -195 2159 111 0 0 chr17 1870794 1871091 -83567389 + AluSx SINE Alu 1 297 -15 913 165 215 58 chr17 1871091 1871224 -83567256 + AluJb SINE Alu 107 302 0 337 297 96 41 chr17 1871527 1871746 -83566734 - L1 LINE L1 -1034 5112 4882 1899 132 0 26 chr17 1871859 1872169 -83566311 + AluSx SINE Alu 1 302 -10 1875 168 93 26 chr17 1872308 1872694 -83565786 - L1MC2 LINE L1 -71 6273 5855 2386 51 3 16 chr17 1872694 1873005 -83565475 + AluY SINE Alu 1 307 -4 1875 168 93 26 chr17 1873005 1873036 -83565444 - L1MC2 LINE L1 -489 5855 5828 5623 46 3 5 chr17 1873321 1873995 -83564485 + L1PA5 LINE L1 5481 6153 -1 2190 107 3 28 chr17 1874352 1874671 -83563809 - AluY SINE Alu 0 311 1 1904 130 60 0 chr17 1874755 1875039 -83563441 - AluSq SINE Alu -12 301 1 1884 174 0 0 chr17 1875208 1875506 -83562974 - AluJb SINE Alu -14 298 1 657 165 126 77 chr17 1875506 1875688 -83562792 - AluJo SINE Alu -3 309 119 297 0 0 0 chr17 1875748 1875781 -83562699 + (TG)n Simple_repeat Simple_repeat 2 34 0 1456 171 121 11 chr17 1875956 1876220 -83562260 + AluSg SINE Alu 1 293 -17 503 200 0 0 chr17 1876243 1876338 -83562142 + U13 snRNA snRNA 1 95 -9 2328 95 3 10 chr17 1876482 1876788 -83561692 - AluSg SINE Alu -6 304 1 1203 168 25 15 chr17 1876816 1877013 -83561467 + AluJo SINE Alu 83 281 -31 885 96 0 0 chr17 1877494 1877609 -83560871 - AluY SINE Alu -20 291 177 338 268 64 119 chr17 1877627 1877809 -83560671 - L1 LINE L1 -2034 4112 3944 2098 127 3 7 chr17 1877809 1878108 -83560372 - AluSx SINE Alu -14 298 1 338 268 64 119 chr17 1878108 1878160 -83560320 - L1 LINE L1 -2202 3944 3891 2016 133 28 0 chr17 1879536 1879821 -83558659 + AluSx SINE Alu 1 293 -19 2137 102 56 0 chr17 1879821 1880106 -83558374 + AluSc SINE Alu 1 301 -8 1997 126 14 20 chr17 1880115 1880408 -83558072 + AluSx SINE Alu 1 291 -21 6149 90 60 6 chr17 1880795 1882209 -83556271 - L1PA8 LINE L1 0 6172 4675 1593 103 210 4 chr17 1882378 1882630 -83555850 + AluY SINE Alu 1 304 -7 2111 119 0 46 chr17 1882897 1882943 -83555537 - AluSx SINE Alu 0 312 265 414 0 0 0 chr17 1882943 1882989 -83555491 + (TG)n Simple_repeat Simple_repeat 1 46 0 2111 119 0 46 chr17 1882989 1883269 -83555211 - AluSx SINE Alu -47 265 1 2257 106 3 10 chr17 1883393 1883694 -83554786 + AluSp SINE Alu 1 299 -14 1062 104 84 0 chr17 1883695 1883849 -83554631 + AluY SINE Alu 135 301 -10 874 211 0 0 chr17 1883940 1884106 -83554374 - AluJb SINE Alu 0 312 147 2241 110 10 0 chr17 1884266 1884557 -83553923 - AluSg SINE Alu -16 294 1 612 88 0 0 chr17 1884558 1884638 -83553842 - AluSg SINE Alu -224 86 7 1137 141 0 0 chr17 1884808 1884971 -83553509 - AluSp SINE Alu -14 299 137 1850 93 4 0 chr17 1884972 1885208 -83553272 - AluSg SINE Alu -14 296 60 312 27 0 0 chr17 1885230 1885267 -83553213 + (TC)n Simple_repeat Simple_repeat 1 37 0 299 208 0 0 chr17 1885275 1885328 -83553152 + Tigger4(Zombi) DNA MER2_type 2679 2731 0 2448 97 7 0 chr17 1886155 1886464 -83552016 - AluSx SINE Alu -1 311 1 342 231 20 121 chr17 1886974 1887173 -83551307 + MIR SINE MIR 84 262 0 993 67 0 0 chr17 1887790 1887909 -83550571 + AluY SINE Alu 174 292 -19 2110 99 14 3 chr17 1888607 1888891 -83549589 + AluSx SINE Alu 1 287 -25 1915 147 31 0 chr17 1888969 1889255 -83549225 + AluJo SINE Alu 1 295 -17 2310 58 0 7 chr17 1889258 1889533 -83548947 + AluY SINE Alu 1 273 -38 409 293 63 63 chr17 1889638 1889812 -83548668 + L1ME LINE L1 5552 5725 -396 2166 92 27 7 chr17 1889830 1890123 -83548357 - AluSq SINE Alu -14 299 1 248 217 0 36 chr17 1890311 1890394 -83548086 + CT-rich Low_complexity Low_complexity 4 83 0 467 276 173 5 chr17 1891382 1891567 -83546913 + MIR SINE MIR 31 246 -16 2281 83 13 17 chr17 1891756 1892056 -83546424 - AluSg SINE Alu 0 310 12 2267 128 0 0 chr17 1892161 1892467 -83546013 - AluSx SINE Alu -6 306 1 1810 165 0 49 chr17 1892550 1892877 -83545603 + AluJo SINE Alu 1 311 -1 2335 102 7 0 chr17 1893352 1893647 -83544833 + AluSq SINE Alu 1 297 -16 2740 36 0 0 chr17 1893922 1894229 -83544251 + AluY SINE Alu 1 307 -4 22 0 0 0 chr17 1895241 1895263 -83543217 + AT_rich Low_complexity Low_complexity 1 22 0 606 223 0 15 chr17 1895427 1895557 -83542923 + FLAM_A SINE Alu 5 132 -1 2031 136 10 7 chr17 1895572 1895867 -83542613 - AluSx SINE Alu -16 296 1 846 83 101 0 chr17 1896089 1896198 -83542282 + AluJo SINE Alu 6 125 -187 1132 152 0 17 chr17 1896239 1896417 -83542063 + AluJo SINE Alu 120 294 -18 2227 106 0 28 chr17 1896656 1896976 -83541504 + AluSx SINE Alu 1 311 -1 2427 54 34 3 chr17 1897445 1897739 -83540741 + AluY SINE Alu 1 303 -8 2440 71 0 0 chr17 1898137 1898456 -83540024 + AluY SINE Alu 1 311 0 2235 118 0 31 chr17 1898539 1898684 -83539796 + AluSx SINE Alu 1 149 -163 2345 90 10 3 chr17 1898684 1898984 -83539496 + AluSp SINE Alu 1 302 -11 2235 118 0 31 chr17 1898984 1899160 -83539320 + AluSx SINE Alu 149 312 0 1710 163 41 34 chr17 1899170 1899464 -83539016 + AluJo SINE Alu 1 296 -16 737 240 12 6 chr17 1899475 1899646 -83538834 + MER3 DNA MER1_type 38 209 0 1146 112 0 0 chr17 1899890 1900236 -83538244 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 595 275 128 32 chr17 1900245 1900652 -83537828 - L1MC4 LINE L1 -48 7994 7549 242 299 126 0 chr17 1901393 1901480 -83537000 + MIR SINE MIR 153 250 -12 2165 131 3 0 chr17 1901520 1901817 -83536663 + 7SLRNA srpRNA srpRNA 18 315 -5 1159 129 20 65 chr17 1902052 1902253 -83536227 - AluJb SINE Alu -34 278 87 186 43 0 0 chr17 1904125 1904148 -83534332 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr17 1906187 1906216 -83532264 + (T)n Simple_repeat Simple_repeat 1 29 0 853 98 0 8 chr17 1906565 1906698 -83531782 + FLAM_C SINE Alu 2 133 0 1992 143 10 10 chr17 1907013 1907321 -83531159 + AluSq SINE Alu 1 308 -5 308 258 153 31 chr17 1907654 1907817 -83530663 + MER5A DNA MER1_type 7 189 0 2357 103 0 0 chr17 1907916 1908217 -83530263 - AluSg SINE Alu -9 301 1 2116 104 0 11 chr17 1908539 1908818 -83529662 - AluSq SINE Alu -37 276 1 2083 101 3 0 chr17 1911846 1912133 -83526347 + AluSg SINE Alu 1 288 -22 304 30 60 30 chr17 1912495 1912562 -83525918 + (CCCCCG)n Simple_repeat Simple_repeat 5 73 0 1704 130 0 0 chr17 1913731 1913984 -83524496 + AluSx SINE Alu 54 306 0 2444 74 7 3 chr17 1917682 1917981 -83520499 + AluSp SINE Alu 1 300 -13 180 138 0 0 chr17 1919280 1919309 -83519171 + MIR SINE MIR 117 145 -117 2177 106 0 10 chr17 1919326 1919618 -83518862 + AluSx SINE Alu 1 289 -23 1870 147 0 14 chr17 1919899 1920192 -83518288 - AluJb SINE Alu -23 289 1 2356 104 0 0 chr17 1920196 1920494 -83517986 - AluSg SINE Alu -12 298 1 2444 88 0 3 chr17 1923382 1923690 -83514790 - AluSq SINE Alu -6 307 1 344 312 33 45 chr17 1924508 1924684 -83513796 - MIR3 SINE MIR 0 208 35 245 260 146 32 chr17 1924750 1924873 -83513607 + MIR SINE MIR 47 184 -24 187 291 157 22 chr17 1926868 1927002 -83511478 - MIR3 SINE MIR -34 174 23 236 219 31 31 chr17 1929053 1929117 -83509363 - MIR SINE MIR -118 144 81 306 186 4 35 chr17 1930688 1930772 -83507708 + MIR SINE MIR 49 126 -82 214 158 42 63 chr17 1932066 1932161 -83506319 + (CCCG)n Simple_repeat Simple_repeat 4 96 0 225 226 312 0 chr17 1932918 1933004 -83505476 - MIR SINE MIR -49 159 49 1631 106 21 100 chr17 1933408 1933736 -83504744 + AluJo SINE Alu 1 302 -10 2338 67 7 0 chr17 1933736 1934034 -83504446 + AluSq SINE Alu 1 300 -13 358 246 40 43 chr17 1934065 1934232 -83504248 + L1MC4 LINE L1 1959 6985 -1337 260 254 103 11 chr17 1934256 1934437 -83504043 - L1MC4a LINE L1 -507 5826 5729 2016 135 26 0 chr17 1934611 1934914 -83503566 + AluJb SINE Alu 1 311 -1 2087 103 3 0 chr17 1935038 1935328 -83503152 - AluSx SINE Alu -21 291 1 484 286 0 0 chr17 1935405 1935531 -83502949 + MER94 DNA DNA 1 126 -8 2299 93 3 0 chr17 1935568 1935870 -83502610 - AluSg SINE Alu -7 303 1 195 411 56 0 chr17 1935873 1935963 -83502517 + L2 LINE L2 3155 3249 -23 960 195 0 0 chr17 1935968 1936137 -83502343 - FRAM SINE Alu -4 172 4 1723 75 6 177 chr17 1936263 1936630 -83501850 - AluSp SINE Alu 0 308 1 2152 110 7 0 chr17 1936915 1937223 -83501257 + AluSx SINE Alu 1 310 -2 335 194 10 126 chr17 1937678 1937746 -83500734 + MIR3 SINE MIR 112 186 -22 1784 124 10 59 chr17 1937746 1938052 -83500428 + AluSx SINE Alu 1 291 -21 2328 71 7 0 chr17 1938053 1938348 -83500132 + AluY SINE Alu 1 297 -14 335 194 10 126 chr17 1938348 1938380 -83500100 + MIR3 SINE MIR 185 202 -6 2120 136 0 0 chr17 1938475 1938783 -83499697 - AluSx SINE Alu -4 308 1 241 195 0 0 chr17 1939052 1939093 -83499387 + Alu SINE Alu 239 279 -22 636 171 0 18 chr17 1939147 1939258 -83499222 + FLAM_A SINE Alu 20 128 -14 2035 122 30 0 chr17 1939259 1939563 -83498917 + AluSp SINE Alu 1 313 0 516 210 129 47 chr17 1939588 1939700 -83498780 - MLT1K LTR MaLR -66 522 421 2191 107 0 7 chr17 1939700 1940008 -83498472 - AluSg SINE Alu -4 306 1 516 210 129 47 chr17 1940008 1940128 -83498352 - MLT1K LTR MaLR -167 421 271 288 299 13 0 chr17 1940186 1940263 -83498217 - MLT1K LTR MaLR -318 270 193 2204 97 7 3 chr17 1940898 1941196 -83497284 - AluSx SINE Alu -13 299 1 2489 53 0 3 chr17 1943751 1944055 -83494425 - AluSq SINE Alu -10 303 1 27 116 0 0 chr17 1945142 1945288 -83493192 + GC_rich Low_complexity Low_complexity 1 146 0 2173 93 0 31 chr17 1945655 1945976 -83492504 + AluSx SINE Alu 1 311 -1 551 320 82 42 chr17 1946142 1946520 -83491960 - L2 LINE L2 -1 3271 2879 2147 84 3 72 chr17 1946551 1946747 -83491733 - AluSx SINE Alu -3 309 144 2360 60 0 17 chr17 1946747 1947046 -83491434 - AluY SINE Alu -17 294 1 2147 84 3 72 chr17 1947046 1947181 -83491299 - AluSx SINE Alu -168 144 1 2048 108 10 14 chr17 1947181 1947477 -83491003 - AluSg SINE Alu -15 295 1 1433 168 119 0 chr17 1947478 1947746 -83490734 - AluJo SINE Alu -12 300 1 591 328 6 0 chr17 1947796 1947973 -83490507 + MER5B DNA MER1_type 1 178 0 2386 90 0 6 chr17 1948108 1948420 -83490060 + AluSg SINE Alu 1 310 0 802 145 0 36 chr17 1948450 1948588 -83489892 + FRAM SINE Alu 28 160 -16 1435 174 68 14 chr17 1948609 1948890 -83489590 + AluJb SINE Alu 1 296 -16 2449 49 13 0 chr17 1948890 1949196 -83489284 + AluY SINE Alu 1 310 -1 24 0 0 0 chr17 1949592 1949616 -83488864 + AT_rich Low_complexity Low_complexity 1 24 0 806 168 0 0 chr17 1949617 1949736 -83488744 - FLAM_C SINE Alu -24 119 1 2209 88 0 13 chr17 1949773 1950079 -83488401 + AluSx SINE Alu 1 302 -10 681 196 55 0 chr17 1950200 1950363 -83488117 - L1MB2 LINE L1 -5 6166 5995 263 283 0 0 chr17 1950707 1950767 -83487713 + MER91A DNA MER1_type 4 63 -133 216 200 59 82 chr17 1950801 1950886 -83487594 + MER91A DNA MER1_type 18 100 -96 378 0 0 0 chr17 1951086 1951128 -83487352 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr17 1951127 1951151 -83487329 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 543 207 18 0 chr17 1952532 1952643 -83485837 + MIR SINE MIR 80 192 -70 2148 118 0 0 chr17 1952999 1953296 -83485184 + AluSx SINE Alu 1 297 -15 2462 47 0 10 chr17 1953296 1953642 -83484838 + AluY SINE Alu 1 311 0 2541 58 3 0 chr17 1953813 1954123 -83484357 - AluSp SINE Alu -2 311 1 2442 76 0 6 chr17 1954309 1954624 -83483856 - AluSp SINE Alu 0 313 1 253 299 29 135 chr17 1954699 1954973 -83483507 + L2 LINE L2 2919 3163 -109 2206 99 3 0 chr17 1955059 1955352 -83483128 - AluY SINE Alu -17 294 1 190 211 0 0 chr17 1955928 1955966 -83482514 - MIR SINE MIR -61 147 110 2195 115 0 0 chr17 1955997 1956293 -83482187 - AluSx SINE Alu -14 298 3 554 236 38 25 chr17 1956358 1956515 -83481965 + MIR3 SINE MIR 35 193 -15 2072 108 3 0 chr17 1956712 1956999 -83481481 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr17 1956999 1957023 -83481457 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 809 164 0 0 chr17 1957029 1957151 -83481329 + FLAM_C SINE Alu 1 122 -21 1959 122 10 10 chr17 1957163 1957520 -83480960 + AluSx SINE Alu 1 312 0 2466 48 10 16 chr17 1958027 1958340 -83480140 - AluY SINE Alu 0 311 1 582 207 38 44 chr17 1958613 1958637 -83479843 + MIR SINE MIR 32 55 -207 1545 158 15 8 chr17 1958637 1958902 -83479578 - AluJo SINE Alu -45 267 1 582 207 38 44 chr17 1958902 1959052 -83479428 + MIR SINE MIR 55 208 -54 2302 41 48 3 chr17 1959055 1959348 -83479132 + AluY SINE Alu 1 306 -5 2161 112 0 0 chr17 1959353 1959648 -83478832 + AluSx SINE Alu 1 295 -17 2330 87 0 3 chr17 1959650 1959960 -83478520 + AluSc SINE Alu 1 309 0 2258 74 3 7 chr17 1959963 1960251 -83478229 + AluY SINE Alu 1 289 -22 299 25 25 0 chr17 1960251 1960291 -83478189 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 534 256 107 66 chr17 1960415 1960704 -83477776 - L2 LINE L2 -2 3311 3011 1124 164 100 9 chr17 1960711 1960942 -83477538 + MLT1E1 LTR MaLR 1 252 -402 2235 112 0 3 chr17 1960944 1961257 -83477223 + AluSx SINE Alu 1 312 0 531 173 11 8 chr17 1961319 1961333 -83477147 + MLT1E LTR MaLR 357 369 -224 1455 142 9 0 chr17 1961333 1961559 -83476921 + AluJb SINE Alu 84 311 -1 531 173 11 8 chr17 1961559 1961660 -83476820 + MLT1E LTR MaLR 369 593 0 250 211 111 11 chr17 1961660 1961750 -83476730 - L2 LINE L2 -258 3014 2916 267 281 0 0 chr17 1961763 1961827 -83476653 - MIR SINE MIR 0 262 199 * 292 350 54 39 chr17 1961825 1961959 -83476521 - L2 LINE L2 -400 2914 2775 2043 110 0 32 chr17 1961959 1962156 -83476324 + AluSx SINE Alu 1 186 -126 2397 73 0 0 chr17 1962156 1962456 -83476024 - AluY SINE Alu -11 300 1 2043 110 0 32 chr17 1962456 1962568 -83475912 + AluSx SINE Alu 186 300 -12 292 350 54 39 chr17 1962568 1962636 -83475844 - L2 LINE L2 -539 2775 2709 1217 153 14 5 chr17 1962639 1962848 -83475632 - AluJo SINE Alu -15 297 87 676 304 57 18 chr17 1962853 1963133 -83475347 - L2 LINE L2 -604 2710 2420 2160 256 88 41 chr17 1963179 1963712 -83474768 + L2 LINE L2 2153 2660 -653 2251 92 0 3 chr17 1963712 1964015 -83474465 + AluSx SINE Alu 1 302 -10 2160 256 88 41 chr17 1964015 1964427 -83474053 + L2 LINE L2 2660 3051 -262 2235 101 0 10 chr17 1964427 1964734 -83473746 - AluSg SINE Alu 0 310 7 2160 256 88 41 chr17 1964734 1964751 -83473729 + L2 LINE L2 3051 3066 -247 1004 161 105 115 chr17 1964751 1965056 -83473424 - AluJo SINE Alu 0 302 1 2160 256 88 41 chr17 1965056 1965203 -83473277 + L2 LINE L2 3066 3312 -1 252 234 110 69 chr17 1965196 1965341 -83473139 - L2 LINE L2 -887 2427 2277 * 1882 133 16 35 chr17 1965345 1965661 -83472819 + AluJb SINE Alu 3 312 0 201 322 0 0 chr17 1965718 1965805 -83472675 + (TG)n Simple_repeat Simple_repeat 2 88 0 2278 119 0 0 chr17 1966534 1966846 -83471634 - AluSq SINE Alu -1 312 1 2202 85 3 3 chr17 1967243 1967536 -83470944 - AluSx SINE Alu -19 293 1 2097 122 0 0 chr17 1968009 1968303 -83470177 + AluSq SINE Alu 1 294 -19 519 273 60 11 chr17 1968421 1968604 -83469876 - MIR SINE MIR -3 259 68 273 280 63 63 chr17 1968837 1969012 -83469468 + L2 LINE L2 3005 3179 -134 330 67 0 0 chr17 1969066 1969111 -83469369 + (TG)n Simple_repeat Simple_repeat 1 45 0 181 277 21 0 chr17 1969123 1969170 -83469310 + L2 LINE L2 3180 3227 -86 331 308 0 0 chr17 1970229 1970349 -83468131 + G-rich Low_complexity Low_complexity 1 120 0 341 195 146 0 chr17 1970646 1970728 -83467752 + MIR SINE MIR 33 126 -82 2082 89 13 13 chr17 1970834 1971137 -83467343 + AluSx SINE Alu 1 303 -9 418 144 10 96 chr17 1971269 1971373 -83467107 + MIR SINE MIR 128 222 -40 1955 142 0 0 chr17 1971792 1972102 -83466378 + AluSg SINE Alu 1 310 0 506 306 44 16 chr17 1972468 1972651 -83465829 + MIR SINE MIR 35 222 -40 2112 110 0 0 chr17 1972731 1973048 -83465432 - AluSx SINE Alu 0 317 1 2076 139 0 3 chr17 1973049 1973351 -83465129 - AluSx SINE Alu -11 301 1 1023 189 0 0 chr17 1973365 1973540 -83464940 - AluJo/FRAM SINE Alu -1 311 137 1789 138 14 3 chr17 1973540 1973822 -83464658 - AluJb SINE Alu -5 307 23 472 246 154 11 chr17 1973953 1974128 -83464352 - MIR SINE MIR -49 213 14 244 184 0 20 chr17 1974340 1974389 -83464091 - LTR33 LTR ERVL 0 521 474 1692 104 0 0 chr17 1974395 1974616 -83463864 + AluSq SINE Alu 1 221 -92 1120 45 0 8 chr17 1974616 1974750 -83463730 - AluSc SINE Alu -176 133 1 689 108 0 0 chr17 1974751 1974853 -83463627 - L1M3 LINE L1 -378 5793 5692 187 43 0 0 chr17 1974859 1974882 -83463598 + (TTTTC)n Simple_repeat Simple_repeat 2 145 0 2239 52 0 25 chr17 1974882 1975168 -83463312 - AluY SINE Alu -1 307 7 206 32 32 0 chr17 1975206 1975237 -83463243 + (TA)n Simple_repeat Simple_repeat 2 33 0 958 177 6 6 chr17 1975239 1975397 -83463083 - FAM SINE Alu -17 158 1 308 353 24 65 chr17 1975405 1975575 -83462905 - L1 LINE L1 -943 5203 5041 2362 62 7 3 chr17 1975580 1975888 -83462592 - AluSg SINE Alu -1 309 1 29 78 0 0 chr17 1976147 1976211 -83462269 + GC_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr17 1976284 1976307 -83462173 + GC_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr17 1976338 1976360 -83462120 + GC_rich Low_complexity Low_complexity 1 22 0 378 254 82 22 chr17 1977348 1977482 -83460998 - MIR SINE MIR -90 172 31 2057 126 0 10 chr17 1977681 1977982 -83460498 - AluJb SINE Alu -10 302 5 353 301 16 8 chr17 1978053 1978176 -83460304 + MLT1K LTR MaLR 174 297 -291 2399 64 0 0 chr17 1978438 1978733 -83459747 - AluY SINE Alu -16 295 1 2017 127 3 0 chr17 1978746 1979037 -83459443 - AluSg SINE Alu -18 292 1 486 265 7 26 chr17 1979277 1979428 -83459052 - MLT1K LTR MaLR -3 585 438 1455 150 7 66 chr17 1979431 1979704 -83458776 - AluJo SINE Alu -55 257 1 524 331 38 44 chr17 1979710 1979843 -83458637 - L1MC/D LINE L1 -2030 5778 5646 1727 164 23 13 chr17 1979843 1980012 -83458468 - AluJb SINE Alu -10 302 127 2370 92 0 0 chr17 1980012 1980315 -83458165 - AluSq SINE Alu -10 303 1 1727 164 23 13 chr17 1980315 1980444 -83458036 - AluJb SINE Alu -185 127 1 524 331 38 44 chr17 1980444 1980654 -83457826 - L1MC/D LINE L1 -2162 5646 5437 1881 56 0 0 chr17 1980656 1980887 -83457593 + AluY SINE Alu 81 311 0 2292 90 0 0 chr17 1980915 1981205 -83457275 - AluSx SINE Alu -22 290 1 1334 162 15 19 chr17 1981236 1981507 -83456973 - L1MC3 LINE L1 -200 7585 7316 2170 128 0 0 chr17 1981507 1981819 -83456661 - AluSq SINE Alu -1 312 1 2305 96 3 6 chr17 1981838 1982152 -83456328 - AluSp SINE Alu 0 313 1 467 196 10 0 chr17 1982191 1982288 -83456192 + MER2 DNA MER2_type 1 98 -247 1330 163 0 50 chr17 1982359 1982542 -83455938 - L1M4 LINE L1 -641 5543 5377 2498 65 3 0 chr17 1982542 1982851 -83455629 - AluY SINE Alu -1 310 1 1330 163 0 50 chr17 1982851 1982949 -83455531 - L1M4 LINE L1 -807 5377 5276 2100 111 13 25 chr17 1982951 1983266 -83455214 - AluSx SINE Alu -1 311 1 294 179 0 0 chr17 1983267 1983323 -83455157 - MLT1A2 LTR MaLR -318 56 1 1270 173 5 0 chr17 1983338 1983540 -83454940 - AluJo SINE Alu -109 203 1 2165 125 0 0 chr17 1983978 1984290 -83454190 + AluSx SINE Alu 1 312 0 329 314 8 42 chr17 1984528 1984646 -83453834 + MIR3 SINE MIR 85 198 -10 2104 100 28 0 chr17 1984714 1985005 -83453475 + AluSx SINE Alu 1 299 -13 2373 97 0 0 chr17 1985005 1985315 -83453165 + AluSg SINE Alu 1 310 0 310 338 116 0 chr17 1985703 1985901 -83452579 + L2 LINE L2 2341 2561 -753 776 148 49 0 chr17 1985904 1986026 -83452454 + FLAM_A SINE Alu 1 128 -5 2305 64 0 14 chr17 1986026 1986321 -83452159 + AluY SINE Alu 5 295 -16 1447 107 0 10 chr17 1986328 1986553 -83451927 + AluSg/x SINE Alu 80 302 0 212 342 53 0 chr17 1986553 1986629 -83451851 + L2 LINE L2 2643 2722 -592 1487 171 67 56 chr17 1986800 1986923 -83451557 + MLT1A1 LTR MaLR 1 121 -244 1706 114 103 0 chr17 1986923 1987185 -83451295 + AluSg SINE Alu 3 291 -19 1487 171 67 56 chr17 1987185 1987418 -83451062 + MLT1A1 LTR MaLR 121 361 -4 191 292 0 0 chr17 1987433 1987481 -83450999 + L2 LINE L2 3000 3047 -225 2315 98 7 0 chr17 1987646 1987952 -83450528 + AluSg SINE Alu 1 308 -2 706 276 59 118 chr17 1988166 1988302 -83450178 - L1MC4a LINE L1 -1915 5893 5751 2154 92 14 7 chr17 1988302 1988596 -83449884 - AluY SINE Alu -15 296 1 706 276 59 118 chr17 1988596 1988864 -83449616 - L1MC4a LINE L1 -2057 5751 5513 197 262 0 0 chr17 1988914 1988956 -83449524 + L2 LINE L2 3168 3209 -63 2251 102 0 0 chr17 1988974 1989277 -83449203 + AluSq SINE Alu 1 303 -10 1858 167 0 16 chr17 1989509 1989826 -83448654 + AluJo SINE Alu 1 312 0 2436 35 0 0 chr17 1989840 1990187 -83448293 + AluY SINE Alu 3 349 0 339 223 16 144 chr17 1990258 1990356 -83448124 - L3 LINE CR1 -111 1466 1402 2297 106 0 0 chr17 1990356 1990667 -83447813 + AluSx SINE Alu 2 312 0 339 223 16 144 chr17 1990667 1990756 -83447724 - L3 LINE CR1 -175 1402 1303 2133 120 0 19 chr17 1991323 1991681 -83446799 + AluSx SINE Alu 1 352 0 2263 100 13 0 chr17 1992045 1992354 -83446126 - AluSq SINE Alu 0 313 1 540 169 0 0 chr17 1992468 1992551 -83445929 - FLAM_A SINE Alu -16 126 44 1967 114 11 4 chr17 1992558 1992838 -83445642 - AluSq SINE Alu -17 296 15 1541 173 23 36 chr17 1992852 1993159 -83445321 - AluJo SINE Alu -9 303 1 639 209 162 16 chr17 1993166 1993357 -83445123 - MIR SINE MIR -13 249 31 1997 99 75 3 chr17 1993410 1993702 -83444778 - AluSq SINE Alu 0 313 1 465 376 110 38 chr17 1993704 1994241 -83444239 + L3 LINE CR1 186 683 -894 186 43 0 0 chr17 1994241 1994264 -83444216 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 465 376 110 38 chr17 1994264 1994290 -83444190 + L3 LINE CR1 683 706 -871 2246 80 7 0 chr17 1994290 1994622 -83443858 - AluSq SINE Alu 0 334 1 465 376 110 38 chr17 1994622 1994856 -83443624 + L3 LINE CR1 706 1044 -533 182 383 0 0 chr17 1994892 1994952 -83443528 - L2 LINE L2 -1 3271 3212 1971 103 41 3 chr17 1995045 1995335 -83443145 - AluSx SINE Alu -11 301 1 2098 121 0 35 chr17 1995381 1995696 -83442784 - AluSx SINE Alu -8 304 1 508 290 55 84 chr17 1995775 1996154 -83442326 - L2 LINE L2 -80 3233 2866 451 333 82 0 chr17 1996189 1996384 -83442096 + L3 LINE CR1 1343 1553 -24 2283 73 0 0 chr17 1996461 1996749 -83441731 + AluSx SINE Alu 1 288 -24 204 217 0 17 chr17 1997259 1997319 -83441161 + (CGG)n Simple_repeat Simple_repeat 3 61 0 321 26 0 0 chr17 1997388 1997426 -83441054 + (GGA)n Simple_repeat Simple_repeat 1 38 0 338 243 0 0 chr17 1998509 1998612 -83439868 + GA-rich Low_complexity Low_complexity 2 104 0 230 345 12 12 chr17 1999190 1999274 -83439206 + MIR SINE MIR 2 85 -177 310 197 33 0 chr17 1999763 1999824 -83438656 + MIR SINE MIR 74 136 -72 227 357 0 18 chr17 1999892 2000004 -83438476 + L3 LINE CR1 1443 1552 -25 2242 88 0 0 chr17 2000620 2000914 -83437566 - AluSp SINE Alu -18 295 2 403 315 0 0 chr17 2002099 2002533 -83435947 + (TG)n Simple_repeat Simple_repeat 1 434 0 659 184 15 167 chr17 2003158 2003298 -83435182 - MIR SINE MIR -1 261 183 2188 98 0 3 chr17 2003298 2003593 -83434887 + AluSx SINE Alu 1 294 -18 659 184 15 167 chr17 2003593 2003740 -83434740 - MIR SINE MIR -79 183 15 303 325 149 24 chr17 2003765 2004020 -83434460 + L2 LINE L2 3013 3299 -14 192 40 0 0 chr17 2004020 2004045 -83434435 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 303 227 30 0 chr17 2004111 2004177 -83434303 + MIR SINE MIR 5 72 -190 989 198 160 55 chr17 2004178 2004521 -83433959 - MLT1G1 LTR MaLR 0 595 217 2122 117 0 7 chr17 2004530 2004837 -83433643 - AluSg SINE Alu -5 305 1 2237 101 0 0 chr17 2004839 2005135 -83433345 - AluSx SINE Alu -16 296 1 1674 198 36 51 chr17 2005948 2006363 -83432117 + LTR2 LTR ERV1 41 449 0 229 170 0 21 chr17 2006364 2006411 -83432069 + MIR SINE MIR 85 130 -78 2345 73 3 0 chr17 2006464 2006765 -83431715 - AluSq SINE Alu -11 302 1 353 301 58 0 chr17 2006776 2006879 -83431601 - MIR SINE MIR -68 140 32 2140 100 0 28 chr17 2007190 2007511 -83430969 - AluSx SINE Alu 0 312 1 2132 95 10 7 chr17 2007511 2007815 -83430665 - AluSx SINE Alu -7 305 1 1585 186 34 3 chr17 2007819 2008114 -83430366 - AluJo SINE Alu -2 310 7 2311 94 0 0 chr17 2008124 2008431 -83430049 - AluY SINE Alu -4 307 1 322 874 0 27 chr17 2008435 2008728 -83429752 - L1MC4a LINE L1 -232 5889 5542 2381 147 112 68 chr17 2008728 2008792 -83429688 - MLT2B1 LTR ERVL 0 520 460 195 42 0 0 chr17 2008792 2008816 -83429664 + (TG)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2008816 2008858 -83429622 - MLT2B1 LTR ERVL -60 460 421 1927 122 0 45 chr17 2008858 2009170 -83429310 - AluSx SINE Alu -10 302 5 2381 147 112 68 chr17 2009170 2009560 -83428920 - MLT2B1 LTR ERVL -99 421 1 322 874 0 27 chr17 2009560 2009578 -83428902 - L1MC4a LINE L1 -578 5543 5572 1804 123 39 7 chr17 2009627 2009911 -83428569 - AluJb SINE Alu -18 294 2 1738 114 0 70 chr17 2010078 2010376 -83428104 + AluSx SINE Alu 36 312 0 2125 101 7 23 chr17 2010675 2010983 -83427497 - AluSx SINE Alu -9 303 1 181 373 127 0 chr17 2011015 2011133 -83427347 - MIR3 SINE MIR -30 178 46 2103 118 0 0 chr17 2011490 2011786 -83426694 + AluSx SINE Alu 4 299 -13 407 276 135 0 chr17 2012120 2012276 -83426204 + MIR SINE MIR 79 255 -7 2290 106 0 0 chr17 2012413 2012724 -83425756 - AluSx SINE Alu -1 311 1 366 161 0 0 chr17 2012957 2013019 -83425461 - MIR SINE MIR -116 146 85 2361 87 0 0 chr17 2013718 2014018 -83424462 - AluSq SINE Alu -13 300 1 191 365 54 0 chr17 2014074 2014148 -83424332 + L2 LINE L2 3168 3245 -27 341 313 29 34 chr17 2014220 2014383 -83424097 - MLT1K LTR MaLR -4 584 421 2068 89 38 0 chr17 2014383 2014674 -83423806 + AluSx SINE Alu 1 302 -10 341 313 29 34 chr17 2014674 2014718 -83423762 - MLT1K LTR MaLR -167 421 378 2336 102 0 3 chr17 2015428 2015742 -83422738 - AluSq SINE Alu 0 313 1 183 288 51 17 chr17 2015889 2015948 -83422532 - L2 LINE L2 -21 3251 3191 219 318 6 35 chr17 2016324 2016494 -83421986 + (TG)n Simple_repeat Simple_repeat 1 165 0 213 238 0 0 chr17 2017443 2017523 -83420957 + (TG)n Simple_repeat Simple_repeat 1 80 0 186 150 0 0 chr17 2017606 2017646 -83420834 + (TG)n Simple_repeat Simple_repeat 1 40 0 222 234 234 0 chr17 2018831 2018925 -83419555 + L2 LINE L2 3147 3262 -10 328 358 20 35 chr17 2019456 2019657 -83418823 + MIR SINE MIR 11 208 -54 279 331 24 0 chr17 2020150 2020277 -83418203 + (ATGGTG)n Simple_repeat Simple_repeat 2 131 0 395 214 0 11 chr17 2020803 2020892 -83417588 + MIR SINE MIR 92 179 -83 2289 107 0 0 chr17 2021404 2021712 -83416768 - AluSc SINE Alu -1 308 1 2338 95 0 0 chr17 2021757 2022061 -83416419 + AluSx SINE Alu 1 304 -8 474 18 0 0 chr17 2022159 2022214 -83416266 + (TG)n Simple_repeat Simple_repeat 1 55 0 609 202 82 109 chr17 2022396 2022567 -83415913 + L1MC5 LINE L1 7548 7722 -239 1579 144 7 22 chr17 2022567 2022837 -83415643 - AluJb SINE Alu -46 266 1 609 202 82 109 chr17 2022837 2023041 -83415439 + L1MC5 LINE L1 7722 7913 -48 2146 110 0 0 chr17 2023355 2023645 -83414835 - AluSx SINE Alu -22 290 1 1567 216 37 41 chr17 2025457 2025549 -83412931 + MER113 DNA MER1_type? 17 108 -413 1898 115 3 11 chr17 2025549 2025835 -83412645 + AluSx SINE Alu 1 284 -28 208 0 0 0 chr17 2025835 2025858 -83412622 + (TAAA)n Simple_repeat Simple_repeat 2 136 0 1567 216 37 41 chr17 2025858 2026227 -83412253 + MER113 DNA MER1_type? 108 477 -44 262 140 21 97 chr17 2027477 2027579 -83410901 + C-rich Low_complexity Low_complexity 1 94 0 22 70 0 0 chr17 2027666 2027709 -83410771 + GC_rich Low_complexity Low_complexity 1 43 0 49 76 0 0 chr17 2027725 2027830 -83410650 + GC_rich Low_complexity Low_complexity 1 105 0 237 239 18 46 chr17 2027897 2028006 -83410474 + C-rich Low_complexity Low_complexity 3 108 0 205 186 0 0 chr17 2028830 2028873 -83409607 + T-rich Low_complexity Low_complexity 2 44 0 210 37 0 0 chr17 2029108 2029135 -83409345 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 778 85 0 77 chr17 2029592 2029722 -83408758 + FLAM_C SINE Alu 11 130 -13 769 242 128 33 chr17 2030272 2030377 -83408103 + MER113 DNA MER1_type? 1 95 -426 2111 105 13 0 chr17 2030377 2030683 -83407797 - AluSq SINE Alu -3 310 1 2292 79 0 7 chr17 2030692 2030996 -83407484 - AluY SINE Alu -9 302 1 769 242 128 33 chr17 2030996 2031163 -83407317 + MER113 DNA MER1_type? 102 252 -269 2512 50 0 0 chr17 2031163 2031463 -83407017 + AluY SINE Alu 1 300 -11 769 242 128 33 chr17 2031463 2031568 -83406912 + MER113 DNA MER1_type? 252 426 -95 2105 108 3 13 chr17 2032649 2032964 -83405516 + AluSx SINE Alu 1 312 0 2344 70 0 0 chr17 2034157 2034459 -83404021 + AluSg SINE Alu 2 303 -7 643 308 25 5 chr17 2034629 2034827 -83403653 + MIR SINE MIR 1 202 -60 1165 129 0 6 chr17 2034865 2035058 -83403422 + AluSg/x SINE Alu 113 304 0 710 227 178 58 chr17 2035060 2035260 -83403220 + L1ME2 LINE L1 5722 5897 -267 2017 126 0 3 chr17 2035260 2035561 -83402919 - AluSg SINE Alu -10 300 1 2047 111 0 0 chr17 2035569 2035882 -83402598 - AluSg SINE Alu 0 313 1 710 227 178 58 chr17 2035882 2036036 -83402444 + L1ME2 LINE L1 5903 6130 -34 2149 103 0 0 chr17 2036037 2036329 -83402151 + AluSx SINE Alu 18 309 -3 2354 80 0 0 chr17 2037143 2037454 -83401026 + AluY SINE Alu 1 311 0 2219 93 7 3 chr17 2037876 2038178 -83400302 + AluSx SINE Alu 1 303 -9 269 294 59 112 chr17 2038219 2038505 -83399975 + L2 LINE L2 3025 3295 -18 216 208 75 0 chr17 2038510 2038563 -83399917 + GA-rich Low_complexity Low_complexity 1 57 0 2210 66 0 0 chr17 2038910 2039182 -83399298 - AluSx SINE Alu -7 305 34 2373 60 0 10 chr17 2039857 2040159 -83398321 + AluY SINE Alu 1 299 -12 22 0 0 0 chr17 2040249 2040271 -83398209 + AT_rich Low_complexity Low_complexity 1 22 0 1140 123 0 0 chr17 2040280 2040450 -83398030 - AluSq SINE Alu -3 310 141 2087 115 0 0 chr17 2040452 2040747 -83397733 - AluJb SINE Alu -17 295 1 661 154 89 8 chr17 2040815 2040938 -83397542 + FLAM_A SINE Alu 1 133 0 1733 185 70 108 chr17 2040963 2041000 -83397480 + L1MC3 LINE L1 7174 7211 -574 2022 110 3 31 chr17 2041000 2041319 -83397161 + AluSx SINE Alu 1 310 -2 1733 185 70 108 chr17 2041319 2041427 -83397053 + L1MC3 LINE L1 7211 7322 -463 1878 66 8 0 chr17 2041427 2041669 -83396811 + AluSp SINE Alu 63 306 -7 1733 185 70 108 chr17 2041669 2042122 -83396358 + L1MC3 LINE L1 7322 7750 -35 2182 110 0 22 chr17 2042123 2042442 -83396038 - AluSx SINE Alu 0 312 1 1091 188 21 52 chr17 2042478 2042766 -83395714 + MER113 DNA MER1_type? 200 478 -43 2307 97 0 3 chr17 2043145 2043456 -83395024 + AluSg SINE Alu 1 310 0 311 307 11 0 chr17 2043468 2043556 -83394924 - MIR SINE MIR -112 150 62 2254 93 0 0 chr17 2043557 2043858 -83394622 + AluY SINE Alu 1 301 -10 882 270 34 142 chr17 2044003 2044192 -83394288 + MLT1K LTR MaLR 16 224 -364 1850 160 0 0 chr17 2044192 2044485 -83393995 - AluJb SINE Alu -10 302 10 882 270 34 142 chr17 2044485 2044795 -83393685 + MLT1K LTR MaLR 224 439 -149 1911 138 0 0 chr17 2044795 2045113 -83393367 - AluSx SINE Alu 0 318 1 882 270 34 142 chr17 2045113 2045230 -83393250 + MLT1K LTR MaLR 439 567 -21 860 163 36 24 chr17 2045726 2045892 -83392588 - AluJo SINE Alu -22 290 123 2183 78 0 3 chr17 2045950 2046232 -83392248 + AluSx SINE Alu 9 289 -23 2154 103 0 10 chr17 2046241 2046543 -83391937 + AluY SINE Alu 1 299 -12 183 42 0 0 chr17 2046547 2046571 -83391909 + (TTTAA)n Simple_repeat Simple_repeat 1 24 0 1870 161 0 0 chr17 2046654 2046940 -83391540 - AluJb SINE Alu -18 294 9 390 277 28 74 chr17 2047607 2047746 -83390734 + L1ME3 LINE L1 5565 5709 -457 2001 53 0 0 chr17 2047746 2047991 -83390489 - AluY SINE Alu -3 308 64 390 277 28 74 chr17 2047991 2048026 -83390454 + L1ME3 LINE L1 5709 5744 -422 2218 79 21 0 chr17 2048026 2048317 -83390163 + AluSx SINE Alu 1 297 -15 390 277 28 74 chr17 2048317 2048435 -83390045 + L1ME3 LINE L1 5744 5850 -316 1917 122 13 10 chr17 2048464 2048768 -83389712 - AluSx SINE Alu -7 305 1 2500 59 0 0 chr17 2048879 2049186 -83389294 - AluY SINE Alu -4 307 1 2266 105 0 0 chr17 2049234 2049539 -83388941 - AluSg SINE Alu -5 305 1 1651 169 13 26 chr17 2049541 2049854 -83388626 - AluJo SINE Alu -3 309 1 248 217 130 99 chr17 2049925 2050086 -83388394 + L1MC4a LINE L1 5780 5945 -1863 2180 112 7 0 chr17 2050086 2050390 -83388090 + AluSx SINE Alu 1 306 -6 779 125 7 0 chr17 2050465 2050601 -83387879 + (GGGGA)n Simple_repeat Simple_repeat 1 137 0 2308 61 0 10 chr17 2050779 2051096 -83387384 - AluSc SINE Alu 0 309 1 2001 92 0 18 chr17 2051097 2051379 -83387101 - AluSx SINE Alu -14 298 22 541 151 0 0 chr17 2051438 2051524 -83386956 + L1MB1 LINE L1 6082 6167 -1 783 197 0 0 chr17 2051579 2051711 -83386769 + FLAM_C SINE Alu 2 133 0 2262 80 10 3 chr17 2052246 2052545 -83385935 + AluSx SINE Alu 1 301 -11 292 197 68 68 chr17 2052983 2053100 -83385380 + L2 LINE L2 2920 3036 -277 2317 84 7 0 chr17 2053163 2053471 -83385009 - AluSx SINE Alu -2 310 1 1315 78 0 0 chr17 2053837 2054004 -83384476 - AluSx SINE Alu -145 167 1 329 309 81 51 chr17 2054004 2054240 -83384240 + L2 LINE L2 3021 3263 -50 2232 110 0 0 chr17 2054496 2054804 -83383676 - AluSc SINE Alu -1 308 1 2122 95 0 46 chr17 2055235 2055560 -83382920 + AluY SINE Alu 1 310 -1 794 233 23 7 chr17 2055807 2056014 -83382466 - MIR SINE MIR -20 242 34 213 254 14 56 chr17 2056000 2056071 -83382409 + L2 LINE L2 3245 3312 -1 * 1518 173 50 11 chr17 2056301 2056579 -83381901 + AluJo SINE Alu 6 294 -18 2459 69 10 0 chr17 2056762 2057067 -83381413 - AluSp SINE Alu -3 310 3 2218 102 3 0 chr17 2057069 2057364 -83381116 - AluSx SINE Alu -16 296 1 2497 58 7 0 chr17 2057379 2057688 -83380792 - AluY SINE Alu 0 311 1 932 81 35 152 chr17 2058513 2058659 -83379821 - AluSx SINE Alu -128 184 65 1314 25 12 6 chr17 2058659 2058822 -83379658 + L1PA4 LINE L1 5992 6155 0 932 81 35 152 chr17 2058822 2058872 -83379608 - AluSx SINE Alu -247 65 11 237 33 0 0 chr17 2058879 2058909 -83379571 + (A)n Simple_repeat Simple_repeat 1 30 0 1443 181 18 18 chr17 2058909 2059190 -83379290 - AluJo SINE Alu -31 281 1 928 150 33 56 chr17 2059673 2059853 -83378627 + MER3 DNA MER1_type 1 129 -80 1973 133 7 0 chr17 2059856 2060156 -83378324 + AluJb SINE Alu 1 302 -10 410 181 150 16 chr17 2060158 2060285 -83378195 + L1ME4a LINE L1 5975 6118 -3 1663 96 57 57 chr17 2060495 2060796 -83377684 + AluSg SINE Alu 1 301 0 344 305 114 55 chr17 2060821 2060891 -83377589 + L1MC/D LINE L1 5485 5549 -573 2108 93 10 3 chr17 2060891 2061191 -83377289 - AluSq SINE Alu -11 302 1 344 305 114 55 chr17 2061191 2061442 -83377038 + L1MC/D LINE L1 5549 5820 -302 1484 181 60 17 chr17 2061449 2061748 -83376732 + AluJb SINE Alu 1 312 0 2073 97 28 0 chr17 2061764 2062053 -83376427 + AluSx SINE Alu 3 299 -13 942 141 58 0 chr17 2062055 2062211 -83376269 + AluSg/x SINE Alu 140 304 -6 2335 65 0 7 chr17 2062215 2062507 -83375973 + AluY SINE Alu 6 295 -16 771 278 17 30 chr17 2062549 2062783 -83375697 - MIR SINE MIR 0 262 32 2130 71 18 14 chr17 2062902 2063236 -83375244 + AluSx SINE Alu 1 335 0 2230 99 3 0 chr17 2063394 2063698 -83374782 + AluY SINE Alu 1 305 -6 2162 108 3 0 chr17 2063709 2064005 -83374475 + AluSq SINE Alu 1 297 -16 3119 179 17 22 chr17 2064006 2064236 -83374244 + L1MB3 LINE L1 5600 5830 -353 2029 130 0 19 chr17 2064236 2064552 -83373928 + AluSx SINE Alu 1 310 -2 3119 179 17 22 chr17 2064552 2064908 -83373572 + L1MB3 LINE L1 5830 6183 0 2206 71 0 3 chr17 2064914 2065196 -83373284 + AluSx SINE Alu 24 304 -8 2238 82 0 0 chr17 2065748 2066073 -83372407 + AluSx SINE Alu 1 325 0 622 188 100 35 chr17 2066094 2066264 -83372216 - MIR SINE MIR -11 251 71 336 278 45 65 chr17 2066310 2066499 -83371981 + MER5A DNA MER1_type 1 175 -3 439 189 78 0 chr17 2067273 2067363 -83371117 - MIR SINE MIR -138 124 28 593 208 39 101 chr17 2067465 2067537 -83370943 + MER20 DNA MER1_type 1 76 -143 2209 83 16 19 chr17 2067537 2067850 -83370630 - AluSx SINE Alu 0 312 1 593 208 39 101 chr17 2067850 2067984 -83370496 + MER20 DNA MER1_type 76 194 -25 641 203 5 107 chr17 2068099 2068159 -83370321 - MER5B DNA MER1_type -1 177 113 2043 98 0 17 chr17 2068159 2068454 -83370026 + AluSg SINE Alu 5 294 -16 641 203 5 107 chr17 2068454 2068524 -83369956 - MER5B DNA MER1_type -65 113 71 2328 94 0 0 chr17 2068524 2068822 -83369658 - AluSq SINE Alu -15 298 1 641 203 5 107 chr17 2068822 2068887 -83369593 - MER5B DNA MER1_type -107 71 1 1029 96 0 0 chr17 2069515 2069651 -83368829 + AluSq/x SINE Alu 1 136 -176 2268 95 0 3 chr17 2069651 2069956 -83368524 + AluSx SINE Alu 1 304 -8 226 202 30 81 chr17 2070143 2070242 -83368238 + MIR SINE MIR 59 152 -56 453 290 77 80 chr17 2070390 2070701 -83367779 + L3 LINE CR1 1215 1525 -52 2475 72 0 0 chr17 2070701 2071007 -83367473 + AluSg SINE Alu 1 306 -4 1308 56 0 0 chr17 2071007 2071169 -83367311 + L1PA4 LINE L1 5994 6155 0 453 290 77 80 chr17 2071169 2071218 -83367262 + L3 LINE CR1 1523 1575 -2 1196 208 77 19 chr17 2073311 2073623 -83364857 - MER61B LTR ERV1 0 425 1 1091 72 0 0 chr17 2074333 2074472 -83364008 + AluSq/x SINE Alu 1 139 -173 1394 141 133 16 chr17 2074546 2074833 -83363647 + AluSx SINE Alu 1 317 0 2003 104 0 14 chr17 2074833 2075153 -83363327 + AluSx SINE Alu 1 316 0 192 135 0 0 chr17 2075746 2075783 -83362697 + (CA)n Simple_repeat Simple_repeat 2 38 0 2018 106 17 3 chr17 2075857 2075988 -83362492 + AluSx SINE Alu 1 129 -183 198 0 0 0 chr17 2075988 2076010 -83362470 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2018 106 17 3 chr17 2076010 2076170 -83362310 + AluSx SINE Alu 129 296 -16 396 283 53 0 chr17 2076391 2076504 -83361976 - L2 LINE L2 -1 3312 3194 342 196 134 31 chr17 2076593 2076690 -83361790 - MIR3 SINE MIR -7 201 95 506 339 86 5 chr17 2077064 2077250 -83361230 + MIR SINE MIR 47 247 -15 782 254 68 36 chr17 2077499 2077616 -83360864 - L1M4 LINE L1 -1290 4856 4744 1948 142 0 0 chr17 2077616 2077933 -83360547 - AluSx SINE Alu 0 317 1 782 254 68 36 chr17 2077933 2078066 -83360414 - L1M4 LINE L1 -1402 4744 4597 283 260 13 0 chr17 2078156 2078233 -83360247 + MLT1K LTR MaLR 509 586 -2 237 278 0 42 chr17 2078569 2078641 -83359839 - MIR SINE MIR -109 153 85 205 277 15 15 chr17 2078723 2078788 -83359692 + L2 LINE L2 2995 3059 -213 2012 108 28 3 chr17 2078816 2079102 -83359378 - AluSq SINE Alu -20 293 1 423 0 0 0 chr17 2079882 2079929 -83358551 + (CA)n Simple_repeat Simple_repeat 1 47 0 2368 92 0 0 chr17 2080027 2080332 -83358148 - AluSx SINE Alu -7 305 1 2297 107 0 0 chr17 2080377 2080686 -83357794 + AluSc SINE Alu 1 309 0 395 214 0 11 chr17 2081194 2081283 -83357197 - MIR SINE MIR -83 179 92 279 331 24 0 chr17 2081809 2081936 -83356544 + (CACCAT)n Simple_repeat Simple_repeat 2 131 0 328 358 20 35 chr17 2082429 2082630 -83355850 - MIR SINE MIR -54 208 11 223 226 208 28 chr17 2083161 2083267 -83355213 - L2 LINE L2 -10 3262 3138 186 150 0 0 chr17 2084440 2084480 -83354000 + (CA)n Simple_repeat Simple_repeat 1 40 0 213 238 0 0 chr17 2084563 2084643 -83353837 + (CA)n Simple_repeat Simple_repeat 1 80 0 219 318 6 35 chr17 2085592 2085762 -83352718 + (CA)n Simple_repeat Simple_repeat 1 165 0 183 288 51 17 chr17 2086138 2086197 -83352283 + L2 LINE L2 3191 3251 -21 2302 105 0 3 chr17 2086344 2086658 -83351822 + AluSq SINE Alu 1 313 0 355 308 29 34 chr17 2087366 2087410 -83351070 + MLT1K LTR MaLR 378 421 -167 2077 89 38 0 chr17 2087410 2087702 -83350778 - AluSx SINE Alu -9 303 1 355 308 29 34 chr17 2087702 2087865 -83350615 + MLT1K LTR MaLR 421 584 -4 191 365 54 0 chr17 2087937 2088011 -83350469 - L2 LINE L2 -27 3245 3168 2373 83 0 0 chr17 2088067 2088367 -83350113 + AluSq SINE Alu 1 300 -13 366 161 0 0 chr17 2089066 2089128 -83349352 + MIR SINE MIR 85 146 -116 2258 107 3 0 chr17 2089361 2089671 -83348809 + AluSx SINE Alu 1 311 -1 407 276 135 0 chr17 2089808 2089964 -83348516 - MIR SINE MIR -7 255 79 2103 118 0 0 chr17 2090298 2090594 -83347886 - AluSx SINE Alu -13 299 4 181 373 127 0 chr17 2090951 2091069 -83347411 + MIR3 SINE MIR 46 178 -30 2138 97 7 23 chr17 2091101 2091409 -83347071 + AluSx SINE Alu 1 303 -9 1724 117 0 70 chr17 2091709 2092007 -83346473 - AluSx SINE Alu 0 312 36 1804 123 39 7 chr17 2092174 2092458 -83346022 + AluJb SINE Alu 2 294 -18 322 874 0 27 chr17 2092507 2092525 -83345955 + L1MC4a LINE L1 5572 5592 -529 2381 147 112 68 chr17 2092525 2092915 -83345565 + MLT2B1 LTR ERVL 1 372 -148 1927 122 0 45 chr17 2092915 2093227 -83345253 + AluSx SINE Alu 5 302 -10 2381 147 112 68 chr17 2093227 2093269 -83345211 + MLT2B1 LTR ERVL 372 411 -109 195 42 0 0 chr17 2093269 2093293 -83345187 + (CA)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2093293 2093357 -83345123 + MLT2B1 LTR ERVL 411 520 0 322 874 0 27 chr17 2093357 2093650 -83344830 + L1MC4a LINE L1 5592 5889 -232 2311 94 0 0 chr17 2093654 2093961 -83344519 + AluY SINE Alu 1 307 -4 1585 186 34 3 chr17 2093971 2094266 -83344214 + AluJo SINE Alu 7 310 -2 2116 96 10 7 chr17 2094270 2094572 -83343908 + AluSx SINE Alu 1 303 -9 2118 103 0 28 chr17 2094572 2094893 -83343587 + AluSx SINE Alu 1 312 0 836 218 154 3 chr17 2095201 2095494 -83342986 - L1ME LINE L1 -567 5597 5261 2451 72 0 0 chr17 2095503 2095809 -83342671 - AluY SINE Alu -5 306 1 2317 91 0 0 chr17 2095811 2096109 -83342371 - AluSg SINE Alu -12 298 1 692 167 15 38 chr17 2096109 2096241 -83342239 - AluJo/FLAM SINE Alu -173 129 1 2057 129 0 13 chr17 2096243 2096554 -83341926 - AluJb SINE Alu -5 307 1 990 221 50 31 chr17 2096556 2096714 -83341766 - L1ME LINE L1 -947 5199 5046 2191 102 0 13 chr17 2096714 2097019 -83341461 - AluSc SINE Alu -8 301 1 990 221 50 31 chr17 2097019 2097217 -83341263 - L1ME LINE L1 -1100 5046 4836 754 306 5 0 chr17 2097265 2097461 -83341019 - MER117 DNA MER1_type 0 197 1 351 212 71 62 chr17 2097464 2097577 -83340903 - MIR SINE MIR -135 127 14 232 363 109 16 chr17 2097551 2097744 -83340736 + MIR SINE MIR 32 242 -20 * 2105 81 3 47 chr17 2098212 2098532 -83339948 - AluSq SINE Alu 0 307 1 364 271 102 0 chr17 2098533 2098651 -83339829 + MIR SINE MIR 63 192 -70 1014 238 109 55 chr17 2099408 2099518 -83338962 - LTR56 LTR ERV1 -1 444 341 2186 115 0 3 chr17 2099518 2099823 -83338657 - AluSx SINE Alu -8 304 1 1014 238 109 55 chr17 2099823 2100133 -83338347 - LTR56 LTR ERV1 -104 341 1 269 343 0 19 chr17 2100261 2100366 -83338114 + L2 LINE L2 2304 2406 -908 2225 75 0 0 chr17 2100379 2100693 -83337787 - AluY SINE Alu 0 314 1 2602 142 8 62 chr17 2100703 2101339 -83337141 - MER4B LTR ERV1 0 779 2 2386 75 7 0 chr17 2101340 2101645 -83336835 - AluSp SINE Alu -6 307 1 793 335 23 0 chr17 2101656 2101916 -83336564 + L2 LINE L2 2480 2745 -569 1987 107 0 11 chr17 2101922 2102193 -83336287 + AluSx SINE Alu 1 268 -44 341 371 54 5 chr17 2102236 2102422 -83336058 - L2 LINE L2 -530 2784 2590 186 197 224 0 chr17 2102560 2102636 -83335844 - MER5A DNA MER1_type -93 96 4 307 280 229 0 chr17 2102683 2102840 -83335640 - L2 LINE L2 -896 2418 2226 502 363 14 5 chr17 2103248 2103471 -83335009 + MIR SINE MIR 34 258 -4 2118 123 0 0 chr17 2103570 2103871 -83334609 - AluSq SINE Alu -12 301 1 922 191 7 0 chr17 2103973 2104232 -83334248 + L1MA4 LINE L1 5172 5432 -743 * 1106 171 19 0 chr17 2104225 2104435 -83334045 - L1M4 LINE L1 -493 5691 5478 5152 131 30 15 chr17 2104473 2104952 -83333528 + L1MA4 LINE L1 5430 5928 -372 2240 92 16 3 chr17 2104952 2105258 -83333222 + AluSx SINE Alu 1 310 -2 5152 131 30 15 chr17 2105258 2105626 -83332854 + L1MA4 LINE L1 5928 6289 -11 291 228 22 33 chr17 2105721 2105813 -83332667 - L2 LINE L2 -182 3090 3000 247 308 239 0 chr17 2106529 2106646 -83331834 - MIR3 SINE MIR -22 186 42 1430 174 0 8 chr17 2107165 2107412 -83331068 - AluJb SINE Alu -26 286 42 542 333 4 71 chr17 2107530 2107601 -83330879 + MIR SINE MIR 1 75 -187 2084 86 18 0 chr17 2107601 2107900 -83330580 - AluSg SINE Alu 0 304 1 542 333 4 71 chr17 2107900 2108082 -83330398 + MIR SINE MIR 75 238 -24 348 24 0 0 chr17 2108727 2108768 -83329712 + (CA)n Simple_repeat Simple_repeat 1 41 0 214 214 0 0 chr17 2108920 2108962 -83329518 - MIR SINE MIR -110 152 111 367 252 48 0 chr17 2108972 2109075 -83329405 + MIR SINE MIR 81 188 -74 432 323 117 68 chr17 2109747 2109995 -83328485 + MIR SINE MIR 3 262 0 317 314 191 0 chr17 2110379 2110615 -83327865 + MLT1L LTR MaLR 218 498 -117 2152 101 0 13 chr17 2110849 2111147 -83327333 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 2111657 2111679 -83326801 + AT_rich Low_complexity Low_complexity 1 22 0 544 167 0 0 chr17 2111679 2111763 -83326717 - FLAM_C SINE Alu -25 118 35 2189 92 7 23 chr17 2111830 2112136 -83326344 + AluSx SINE Alu 1 301 -11 1099 194 45 4 chr17 2112228 2112475 -83326005 + MER7A DNA MER2_type 1 255 -91 321 197 58 88 chr17 2112492 2112629 -83325851 + MER7A DNA MER2_type 214 346 0 303 308 121 11 chr17 2112680 2112862 -83325618 - MIR SINE MIR -29 233 32 246 105 0 0 chr17 2112972 2113010 -83325470 + (A)n Simple_repeat Simple_repeat 1 38 0 210 37 0 0 chr17 2113986 2114013 -83324467 + (T)n Simple_repeat Simple_repeat 1 27 0 1369 105 51 39 chr17 2114160 2114417 -83324063 + AluSq SINE Alu 46 305 -8 2354 79 0 19 chr17 2114799 2115117 -83323363 + AluSx SINE Alu 1 312 0 2424 62 7 0 chr17 2115661 2115967 -83322513 - AluSc SINE Alu -1 308 1 400 331 51 11 chr17 2116741 2116916 -83321564 - MIR SINE MIR 0 262 81 213 380 26 9 chr17 2117029 2117142 -83321338 + MIR SINE MIR 23 137 -71 368 302 0 0 chr17 2117261 2117357 -83321123 - L3 LINE CR1 -78 1499 1404 548 330 90 67 chr17 2118192 2119290 -83319190 + L2 LINE L2 2131 3258 -14 2384 75 0 0 chr17 2119294 2119588 -83318892 + AluY SINE Alu 1 294 -17 2310 93 0 10 chr17 2119597 2119908 -83318572 + AluSx SINE Alu 1 308 -4 226 286 88 23 chr17 2120971 2121131 -83317349 - MIR SINE MIR -70 192 23 213 219 109 78 chr17 2121203 2121267 -83317213 + MER5A DNA MER1_type 59 124 -65 209 311 118 37 chr17 2122841 2123002 -83315478 + MIR SINE MIR 65 238 -24 453 203 142 14 chr17 2123154 2123302 -83315178 - MIR3 SINE MIR -15 193 27 2158 112 13 0 chr17 2123766 2124069 -83314411 + AluSg SINE Alu 1 307 -3 2234 104 0 3 chr17 2125778 2126085 -83312395 + AluSx SINE Alu 1 306 -6 270 95 0 0 chr17 2126202 2126244 -83312236 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 838 127 0 0 chr17 2126244 2126362 -83312118 - FLAM_C SINE Alu -25 118 1 2071 116 30 3 chr17 2128075 2128376 -83310104 - AluSg SINE Alu -1 309 1 509 202 0 0 chr17 2128954 2129048 -83309432 + FRAM SINE Alu 68 161 -15 255 320 0 13 chr17 2129158 2129233 -83309247 - MIR SINE MIR -12 250 177 370 268 183 0 chr17 2130022 2130187 -83308293 - MIR SINE MIR -60 148 6 262 395 0 0 chr17 2130185 2130320 -83308160 + MIR SINE MIR 31 140 -68 * 2202 75 0 4 chr17 2130912 2131191 -83307289 + AluSq SINE Alu 1 278 -35 231 36 0 0 chr17 2131191 2131219 -83307261 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 488 307 84 6 chr17 2131766 2131932 -83306548 + MIR3 SINE MIR 5 183 -25 235 198 88 77 chr17 2131939 2131972 -83306508 + HsTC2 DNA Tc2 1 32 -1866 1692 159 0 36 chr17 2131972 2132274 -83306206 - AluJb SINE Alu -21 291 1 235 198 88 77 chr17 2132274 2132331 -83306149 + HsTC2 DNA Tc2 32 92 -1806 200 59 29 0 chr17 2132419 2132453 -83306027 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2115 96 0 7 chr17 2132455 2132735 -83305745 - AluSc SINE Alu -31 278 1 609 210 11 81 chr17 2132736 2132792 -83305688 - MIR SINE MIR -65 197 139 2041 101 7 42 chr17 2132792 2133098 -83305382 - AluSg SINE Alu -15 295 1 609 210 11 81 chr17 2133098 2133227 -83305253 - MIR SINE MIR -123 139 25 223 279 29 0 chr17 2133236 2133304 -83305176 + GA-rich Low_complexity Low_complexity 5 74 0 232 271 0 0 chr17 2133306 2133354 -83305126 - L2 LINE L2 -15 3257 3210 226 165 0 196 chr17 2133484 2133581 -83304899 - L1M3 LINE L1 -653 5527 5450 2346 89 0 0 chr17 2133586 2133889 -83304591 - AluY SINE Alu -8 303 1 1557 110 0 13 chr17 2133889 2134063 -83304417 - AluSg/x SINE Alu -5 307 135 2056 125 0 3 chr17 2134063 2134359 -83304121 - AluSg SINE Alu -15 295 1 1557 110 0 13 chr17 2134359 2134411 -83304069 - AluSg/x SINE Alu -177 135 84 299 295 19 38 chr17 2134597 2134702 -83303778 + L2 LINE L2 3208 3310 -3 226 286 29 0 chr17 2135293 2135363 -83303117 + CT-rich Low_complexity Low_complexity 1 72 0 306 350 0 8 chr17 2136122 2136139 -83302341 + MIR SINE MIR 22 38 -224 2285 95 0 3 chr17 2136139 2136443 -83302037 - AluSx SINE Alu -9 303 1 306 350 0 8 chr17 2136443 2136542 -83301938 + MIR SINE MIR 38 137 -125 207 273 82 45 chr17 2136657 2136767 -83301713 - L2 LINE L2 -12 3301 3188 2421 65 3 3 chr17 2136791 2137100 -83301380 - AluSg SINE Alu 0 310 2 243 0 0 0 chr17 2137905 2137932 -83300548 + (TG)n Simple_repeat Simple_repeat 2 28 0 2270 103 0 0 chr17 2137941 2138241 -83300239 - AluSx SINE Alu -12 300 1 23 33 0 0 chr17 2138246 2138276 -83300204 + AT_rich Low_complexity Low_complexity 1 30 0 807 222 5 31 chr17 2138621 2138815 -83299665 + MIR SINE MIR 47 235 -27 1830 138 46 0 chr17 2138844 2139127 -83299353 - AluSx SINE Alu -16 296 1 2284 85 3 3 chr17 2139147 2139442 -83299038 - AluSq SINE Alu -16 297 3 2114 126 3 0 chr17 2139442 2139743 -83298737 - AluSx SINE Alu -10 302 1 4337 163 29 12 chr17 2139904 2140411 -83298069 - L1MA5 LINE L1 -4 6296 5770 1989 113 12 41 chr17 2140411 2140731 -83297749 - AluSx SINE Alu -1 311 1 4337 163 29 12 chr17 2140731 2140980 -83297500 - L1MA5 LINE L1 -530 5770 5527 2151 93 0 17 chr17 2141450 2141623 -83296857 - AluSx SINE Alu -10 302 135 249 108 0 0 chr17 2141623 2141660 -83296820 + (TA)n Simple_repeat Simple_repeat 2 38 0 2151 93 0 17 chr17 2141660 2141787 -83296693 - AluSx SINE Alu -177 135 7 468 175 34 73 chr17 2142425 2142450 -83296030 - HAL1 LINE L1 -335 2172 2148 2453 62 0 7 chr17 2142450 2142755 -83295725 - AluY SINE Alu -8 303 1 468 175 34 73 chr17 2142755 2142906 -83295574 - HAL1 LINE L1 -359 2148 2003 1833 174 23 0 chr17 2142906 2143210 -83295270 - AluJo SINE Alu -1 311 1 1132 224 74 55 chr17 2143371 2143580 -83294900 - HAL1 LINE L1 -809 1698 1494 2349 96 0 3 chr17 2143580 2143893 -83294587 - AluSx SINE Alu 0 312 1 1132 224 74 55 chr17 2143893 2144103 -83294377 - HAL1 LINE L1 -1013 1494 1271 681 277 49 71 chr17 2144110 2144618 -83293862 - MLT1G LTR MaLR -51 539 38 263 229 169 0 chr17 2144653 2144771 -83293709 - HAL1 LINE L1 -1254 1253 1116 2266 83 0 40 chr17 2144784 2145110 -83293370 - AluSq SINE Alu 0 313 1 251 253 12 24 chr17 2145110 2145193 -83293287 - HAL1 LINE L1 -2425 82 1 906 101 0 0 chr17 2145777 2145896 -83292584 + AluSq/x SINE Alu 15 133 -180 2069 114 0 26 chr17 2145909 2146215 -83292265 + AluSx SINE Alu 1 298 -14 364 270 9 18 chr17 2146848 2146959 -83291521 + MER113 DNA MER1_type? 84 193 -328 627 288 83 0 chr17 2147105 2147310 -83291170 + MIR SINE MIR 2 223 -39 2239 82 0 3 chr17 2147355 2147647 -83290833 - AluSx SINE Alu -21 291 1 242 322 42 17 chr17 2148184 2148302 -83290178 + MIR SINE MIR 20 140 -68 2197 116 0 3 chr17 2148824 2149135 -83289345 + AluSq SINE Alu 1 310 -3 1534 102 204 8 chr17 2149184 2149429 -83289051 - AluSg1 SINE Alu -16 293 1 1980 130 31 0 chr17 2149689 2149981 -83288499 - AluJb SINE Alu -11 301 1 461 293 140 0 chr17 2150543 2150700 -83287780 - MIR SINE MIR -26 236 58 948 212 9 4 chr17 2150714 2150944 -83287536 - L1MB7 LINE L1 -158 6026 5801 2108 73 3 28 chr17 2150962 2151280 -83287200 - AluY SINE Alu 0 311 1 2074 114 3 3 chr17 2151282 2151572 -83286908 - AluSx SINE Alu -14 298 9 22 35 0 0 chr17 2151581 2151610 -83286870 + AT_rich Low_complexity Low_complexity 1 29 0 547 236 0 0 chr17 2151610 2151737 -83286743 - L1MB7 LINE L1 -355 5829 5703 180 0 0 0 chr17 2152134 2152154 -83286326 + (CAT)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 2152196 2152219 -83286261 + AT_rich Low_complexity Low_complexity 1 23 0 2283 76 0 0 chr17 2152221 2152511 -83285969 - AluSq SINE Alu -23 290 1 431 228 60 54 chr17 2152534 2152683 -83285797 - MIR SINE MIR -103 159 10 880 241 55 8 chr17 2153707 2153964 -83284516 - MLT1C LTR MaLR 0 467 199 2156 116 0 7 chr17 2153987 2154288 -83284192 - AluSx SINE Alu -13 299 1 354 45 0 0 chr17 2156300 2156344 -83282136 + (TG)n Simple_repeat Simple_repeat 1 44 0 590 249 133 0 chr17 2156427 2156592 -83281888 - MER5A DNA MER1_type -2 187 1 2222 97 0 3 chr17 2156652 2156952 -83281528 - AluSq SINE Alu -14 299 1 240 86 0 0 chr17 2157853 2157888 -83280592 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 1375 254 178 6 chr17 2158619 2159120 -83279360 - MLT1K LTR MaLR 0 588 2 431 263 9 171 chr17 2159124 2159470 -83279010 - L2 LINE L2 -25 3247 2958 519 301 75 0 chr17 2159475 2159582 -83278898 + MER5A DNA MER1_type 4 130 -59 2278 75 3 0 chr17 2159582 2159875 -83278605 - AluSg SINE Alu -16 294 1 519 301 75 0 chr17 2159875 2159940 -83278540 + MER5A DNA MER1_type 130 189 0 754 311 179 19 chr17 2159994 2160498 -83277982 - L2 LINE L2 -410 2904 2482 1507 187 33 0 chr17 2160498 2160771 -83277709 - AluJo SINE Alu -25 287 6 754 311 179 19 chr17 2160771 2161005 -83277475 - L2 LINE L2 -832 2482 2048 489 293 138 0 chr17 2261278 2261459 -83177021 + MIR SINE MIR 50 255 -7 230 229 114 14 chr17 2261450 2261520 -83176960 - MIR SINE MIR -95 113 37 * 268 303 55 9 chr17 2261900 2262009 -83176471 - L2 LINE L2 -25 3247 3134 23 0 0 0 chr17 2262554 2262577 -83175903 + AT_rich Low_complexity Low_complexity 1 23 0 1091 200 30 34 chr17 2262632 2262703 -83175777 - L1MB7 LINE L1 -1 6183 6113 2396 87 3 3 chr17 2262703 2263015 -83175465 - AluSq SINE Alu -1 312 1 1091 200 30 34 chr17 2263015 2263208 -83175272 - L1MB7 LINE L1 -71 6113 5920 262 114 0 0 chr17 2264311 2264346 -83174134 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 2264391 2264945 -83173535 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 2264947 2265018 -83173462 + L1P LINE L1 5017 5087 -1059 1198 28 0 14 chr17 2265019 2265161 -83173319 + MER11A LTR ERVK 1 140 -1126 9443 23 0 0 chr17 2265169 2266976 -83171504 - L1PA2 LINE L1 -2 6153 4346 8406 31 0 0 chr17 2266976 2267950 -83170530 + L1PA2 LINE L1 3387 4360 -1786 316 329 40 72 chr17 2268001 2268223 -83170257 - L1MB7 LINE L1 -2161 5647 5433 1544 180 34 3 chr17 2268228 2268523 -83169957 - L1MA9 LINE L1 0 6312 6009 1593 179 42 72 chr17 2268530 2268988 -83169492 - L1MCa LINE L1 -4896 1530 1087 1974 175 29 14 chr17 2268988 2269336 -83169144 - MLT1A1 LTR MaLR 0 365 13 3199 197 42 66 chr17 2269337 2270137 -83168343 - L1MCa LINE L1 -4849 1058 577 2104 132 0 3 chr17 2270137 2270433 -83168047 + AluSq SINE Alu 1 295 -18 3199 197 42 66 chr17 2270433 2270996 -83167484 - L1MCa LINE L1 -5330 577 2 248 171 0 0 chr17 2271211 2271252 -83167228 + MER105 DNA DNA 2 42 -162 * 556 248 74 0 chr17 2271251 2271400 -83167080 - MER105 DNA DNA -42 162 3 756 155 65 6 chr17 2271911 2272079 -83166401 - Charlie5 DNA MER1_type -27 2585 2408 491 135 34 149 chr17 2272117 2272192 -83166288 - Charlie5 DNA MER1_type -160 2464 2413 2230 114 3 0 chr17 2272192 2272498 -83165982 - AluSc SINE Alu -2 307 1 491 135 34 149 chr17 2272498 2272570 -83165910 - Charlie5 DNA MER1_type -211 2413 2334 * 1225 262 111 25 chr17 2272561 2273004 -83165476 - MLT1E LTR MaLR -112 481 1 397 121 0 15 chr17 2273038 2273104 -83165376 + MSTA LTR MaLR 1 65 -363 1180 134 153 203 chr17 2273500 2274008 -83164472 - LTR12 LTR ERV1 -231 483 1 897 59 0 0 chr17 2274011 2274113 -83164367 + AluSq/x SINE Alu 35 136 -177 2156 102 3 7 chr17 2274114 2274417 -83164063 + AluY SINE Alu 1 302 -9 857 164 53 0 chr17 2274418 2274570 -83163910 - LTR45B LTR ERV1 -327 162 3 272 290 0 81 chr17 2276218 2276342 -83162138 + MIR SINE MIR 34 147 -115 1798 89 20 16 chr17 2276823 2277143 -83161337 - AluSq SINE Alu 0 359 39 1072 251 39 7 chr17 2277205 2277669 -83160811 + LTR33 LTR ERVL 1 518 -3 1027 221 40 0 chr17 2277829 2278055 -83160425 + MLT1A1 LTR MaLR 130 364 -1 180 395 18 30 chr17 2278056 2278223 -83160257 + L2 LINE L2 2475 2639 -675 796 202 40 0 chr17 2278283 2278456 -83160024 - L1MA4 LINE L1 -4 6296 6117 704 325 41 14 chr17 2278511 2278856 -83159624 + L2 LINE L2 2077 2430 -884 856 231 78 0 chr17 2278877 2279133 -83159347 + MLT1A1 LTR MaLR 2 277 -88 1984 114 7 37 chr17 2280733 2281031 -83157449 - AluSq SINE Alu -24 289 1 2275 169 19 2 chr17 2281031 2281450 -83157030 - L1MA5 LINE L1 -258 6042 5617 348 273 69 18 chr17 2281459 2281792 -83156688 - L1 LINE L1 -1593 4553 4204 201 143 0 0 chr17 2282435 2282470 -83156010 + (GGGAGA)n Simple_repeat Simple_repeat 4 38 0 189 74 0 0 chr17 2282542 2282569 -83155911 + (AATAG)n Simple_repeat Simple_repeat 4 30 0 3327 152 34 7 chr17 2282573 2283159 -83155321 + MER7C DNA MER2_type 1 602 0 217 316 0 13 chr17 2283913 2283989 -83154491 + CT-rich Low_complexity Low_complexity 2 76 0 301 256 44 0 chr17 2284574 2284664 -83153816 - MIR SINE MIR -37 225 132 22 88 0 0 chr17 2284706 2284763 -83153717 + AT_rich Low_complexity Low_complexity 1 57 0 848 121 86 17 chr17 2285119 2285293 -83153187 + MER53 DNA DNA 3 188 -1 1980 162 0 19 chr17 2285556 2285871 -83152609 - AluJo SINE Alu -1 311 3 300 291 38 13 chr17 2286093 2286172 -83152308 + MIR3 SINE MIR 98 178 -30 22 56 0 0 chr17 2286402 2286438 -83152042 + AT_rich Low_complexity Low_complexity 1 36 0 2154 113 0 7 chr17 2286672 2286963 -83151517 + AluSx SINE Alu 1 289 -23 11481 133 91 5 chr17 2286975 2287499 -83150981 - L1MA9 LINE L1 -34 6278 5800 2065 100 16 53 chr17 2287499 2287819 -83150661 - AluSq SINE Alu -5 308 1 11481 133 91 5 chr17 2287819 2290256 -83148224 - L1MA9 LINE L1 -512 5800 3065 8994 20 7 0 chr17 2290256 2292080 -83146400 + L1PA3 LINE L1 4325 6155 0 5420 219 51 73 chr17 2292103 2292524 -83145956 - L1M4 LINE L1 -1598 4784 4355 1215 190 31 0 chr17 2292524 2292750 -83145730 - MER46A DNA MER2_type -3 233 1 5420 219 51 73 chr17 2292750 2293769 -83144711 - L1M4 LINE L1 -2027 4355 3314 2382 80 3 0 chr17 2293769 2294068 -83144412 - AluSc SINE Alu -9 300 1 5420 219 51 73 chr17 2294068 2294402 -83144078 - L1M4 LINE L1 -3068 3314 2974 2374 97 0 10 chr17 2294402 2294712 -83143768 - AluSc SINE Alu -1 308 2 5420 219 51 73 chr17 2294712 2295363 -83143117 - L1M4 LINE L1 -3408 2974 2420 1524 134 4 0 chr17 2295370 2295609 -83142871 + Tigger1 DNA MER2_type 2 241 -2177 433 162 27 18 chr17 2295626 2295737 -83142743 + MER69 DNA AcHobo 2101 2212 -314 518 200 20 0 chr17 2295737 2295837 -83142643 + AluJo SINE Alu 121 222 -90 695 187 251 12 chr17 2295853 2296104 -83142376 + MER69 DNA AcHobo 2216 2526 0 1958 157 3 3 chr17 2296227 2296527 -83141953 + AluJb SINE Alu 1 300 -12 350 262 108 8 chr17 2296937 2297089 -83141391 + MIR SINE MIR 25 180 -58 901 188 41 64 chr17 2297907 2298125 -83140355 - MER58A DNA MER1_type 0 224 12 188 384 89 7 chr17 2298154 2298300 -83140180 + L2 LINE L2 2804 2961 -352 314 289 136 34 chr17 2298402 2298740 -83139740 + LTR33 LTR ERVL 22 393 -130 483 303 102 39 chr17 2299154 2299408 -83139072 + L2 LINE L2 3044 3313 0 186 43 0 0 chr17 2299524 2299547 -83138933 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 268 226 19 0 chr17 2300056 2300109 -83138371 + MLT1D LTR MaLR 1 54 -451 * 1163 154 72 16 chr17 2300104 2300532 -83137948 + MLT1D LTR MaLR 10 505 0 192 158 0 0 chr17 2300558 2300596 -83137884 + (TA)n Simple_repeat Simple_repeat 1 38 0 809 200 12 0 chr17 2300747 2300912 -83137568 - MLT1E2 LTR MaLR 0 626 460 337 215 126 22 chr17 2301682 2301817 -83136663 - MLT1K LTR MaLR -66 522 374 193 391 11 11 chr17 2302249 2302341 -83136139 - MIR SINE MIR -80 182 91 974 182 34 62 chr17 2302341 2302632 -83135848 + L1MA9 LINE L1 5992 6274 -38 262 284 11 34 chr17 2302654 2302742 -83135738 - MIR3 SINE MIR -109 99 14 181 206 0 0 chr17 2303356 2303390 -83135090 - MIR SINE MIR -16 246 213 * 471 351 40 68 chr17 2303360 2303787 -83134693 - L2 LINE L2 -26 3246 2832 465 322 83 10 chr17 2303952 2304157 -83134323 + MIR SINE MIR 30 249 -13 198 200 0 0 chr17 2304123 2304163 -83134317 + L2 LINE L2 3261 3300 -13 * 2661 241 68 22 chr17 2304222 2305265 -83133215 - L1ME3A LINE L1 -5 6165 5088 383 321 18 14 chr17 2306412 2306633 -83131847 + L1M4 LINE L1 3921 4142 -2004 327 280 11 21 chr17 2306635 2306728 -83131752 - L2 LINE L2 -1 3312 3221 585 305 10 5 chr17 2306739 2306936 -83131544 + ERVL LTR ERVL 4709 4906 -858 627 301 10 5 chr17 2307479 2307685 -83130795 + ERVL LTR ERVL 4941 5147 -617 211 365 22 62 chr17 2308176 2308450 -83130030 + L2 LINE L2 2694 2956 -358 310 263 153 25 chr17 2309030 2309148 -83129332 - MER5B DNA MER1_type 0 178 46 507 212 131 77 chr17 2309171 2309368 -83129112 + MER5A DNA MER1_type 14 189 0 2304 103 0 0 chr17 2310112 2310414 -83128066 + AluSp SINE Alu 1 302 -11 1214 331 97 50 chr17 2310449 2310734 -83127746 - L2 LINE L2 -11 3261 2991 2474 74 7 3 chr17 2310734 2311044 -83127436 + AluY SINE Alu 1 311 0 1214 331 97 50 chr17 2311044 2311336 -83127144 - L2 LINE L2 -281 2991 2714 2576 58 0 0 chr17 2311336 2311645 -83126835 + AluY SINE Alu 1 309 -2 1214 331 97 50 chr17 2311645 2312358 -83126122 - L2 LINE L2 -558 2714 1907 30 27 0 0 chr17 2313744 2313781 -83124699 + AT_rich Low_complexity Low_complexity 1 37 0 4552 35 2 0 chr17 2314008 2314547 -83123933 - L1PA3 LINE L1 -3 6152 5613 244 114 0 0 chr17 2314846 2314881 -83123599 + U2 snRNA snRNA 1 35 -153 3934 99 11 0 chr17 2314926 2315480 -83123000 - L1PA11 LINE L1 0 6174 5615 410 127 0 0 chr17 2315482 2315553 -83122927 + L1P LINE L1 5017 5087 -1059 1118 28 0 14 chr17 2315554 2315696 -83122784 + MER11A LTR ERVK 1 140 -1126 13178 24 0 0 chr17 2315704 2318022 -83120458 - L1PA2 LINE L1 -2 6153 3838 29048 43 38 3 chr17 2318023 2321875 -83116605 - L1P LINE L1 -2157 3989 2 3944 130 29 33 chr17 2321875 2322844 -83115636 + MER11A LTR ERVK 119 1266 0 2596 82 3 2 chr17 2322844 2323379 -83115101 + L1P4 LINE L1 5083 5617 -551 242 161 107 0 chr17 2323373 2323429 -83115051 - L1MB4 LINE L1 -36 6144 6083 * 1277 141 20 20 chr17 2323432 2323681 -83114799 - L1MA4 LINE L1 -280 6020 5772 355 305 0 8 chr17 2323800 2323928 -83114552 - L1M4 LINE L1 -1533 4613 4487 337 345 98 0 chr17 2324169 2324363 -83114117 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 2324659 2324688 -83113792 + AT_rich Low_complexity Low_complexity 1 29 0 327 254 88 44 chr17 2324801 2324915 -83113565 - MIR SINE MIR -35 227 109 690 129 23 0 chr17 2326284 2326416 -83112064 - L1MB3 LINE L1 -2 6181 6047 24574 77 10 5 chr17 2326431 2332539 -83105941 - L1PA5 LINE L1 -8 6146 12 334 235 81 78 chr17 2333276 2333302 -83105178 + MLT1K LTR MaLR 32 56 -532 2083 196 112 39 chr17 2333302 2333813 -83104667 + LTR55 LTR ERV 1 548 0 334 235 81 78 chr17 2333813 2334022 -83104458 + MLT1K LTR MaLR 56 298 -290 370 244 0 0 chr17 2334081 2334163 -83104317 - MLT1K LTR MaLR -138 450 369 955 261 127 54 chr17 2334332 2335094 -83103386 + HAL1 LINE L1 637 1454 -1053 243 284 26 32 chr17 2335149 2335272 -83103208 + L1ME LINE L1 3 126 -5944 714 99 18 9 chr17 2335291 2335402 -83103078 - L1MA7 LINE L1 -409 5882 5771 642 137 10 0 chr17 2335402 2335504 -83102976 - L1MA2 LINE L1 0 6304 6202 230 265 0 44 chr17 2335506 2335574 -83102906 + MLT1K LTR MaLR 217 281 -307 4334 116 22 22 chr17 2335651 2336340 -83102140 - L1MA2 LINE L1 -107 6197 5509 434 37 0 0 chr17 2336342 2336396 -83102084 - L1MA2 LINE L1 -895 5407 5354 8101 32 0 0 chr17 2336396 2337539 -83100941 - L1PA3 LINE L1 0 6155 5013 30731 35 1 0 chr17 2337539 2341196 -83097284 + L1PA3 LINE L1 1344 5001 -1145 8039 195 31 83 chr17 2341198 2342826 -83095654 - L1 LINE L1 -783 6782 5072 1843 106 44 7 chr17 2342826 2343099 -83095381 - L1MA1 LINE L1 0 6302 6020 8039 195 31 83 chr17 2343099 2343463 -83095017 - L1 LINE L1 -2493 5072 4691 489 211 11 0 chr17 2343463 2343553 -83094927 - AluJb SINE Alu -11 301 211 8039 195 31 83 chr17 2343553 2344580 -83093900 - L1 LINE L1 -2874 4691 3970 261 0 0 0 chr17 2344580 2344609 -83093871 + (TC)n Simple_repeat Simple_repeat 2 30 0 8039 195 31 83 chr17 2344609 2345639 -83092841 - L1 LINE L1 -3595 3970 2889 316 167 11 67 chr17 2345654 2345744 -83092736 + L1M4 LINE L1 3398 3482 -2664 258 274 49 55 chr17 2346548 2346712 -83091768 + L1MC1 LINE L1 5837 5999 -334 * 1495 149 15 8 chr17 2346594 2346856 -83091624 + L1MB3 LINE L1 5881 6144 -39 811 152 0 30 chr17 2346861 2346993 -83091487 - AluJo SINE Alu -176 136 9 322 302 0 0 chr17 2347286 2347392 -83091088 + L1M4 LINE L1 3465 3570 -2576 6734 206 9 7 chr17 2347397 2348841 -83089639 - L1P LINE L1 -2972 3174 1728 * 20845 40 1 1 chr17 2348836 2351848 -83086632 - L1PA5 LINE L1 -271 5883 2870 6280 142 21 16 chr17 2351824 2352831 -83085649 - MSTA-int LTR MaLR -566 1014 3 * 1961 143 178 22 chr17 2352833 2353203 -83085277 - MSTA LTR MaLR 0 428 1 1813 153 54 15 chr17 2353365 2353699 -83084781 - L1MA7 LINE L1 0 6291 5945 1950 134 62 3 chr17 2353699 2354006 -83084474 + L1M2 LINE L1 5434 5758 -533 429 287 71 71 chr17 2354617 2354899 -83083581 - MLT1I LTR MaLR 0 409 128 254 216 67 97 chr17 2354957 2355091 -83083389 - LTR67 LTR ERVL -17 540 411 312 333 8 17 chr17 2356027 2356147 -83082333 - MLT1L LTR MaLR -355 260 142 192 233 0 0 chr17 2356304 2356347 -83082133 + MIR SINE MIR 61 103 -159 10899 198 44 79 chr17 2356363 2356736 -83081744 - L1PB2 LINE L1 -2 6865 6481 225 232 0 0 chr17 2356736 2356792 -83081688 + LTR66 LTR ERVL 398 453 -157 10899 198 44 79 chr17 2356792 2358959 -83079521 - L1PB2 LINE L1 -386 6481 4241 1981 141 7 3 chr17 2358959 2359258 -83079222 - AluJb SINE Alu -12 300 1 10899 198 44 79 chr17 2359258 2359790 -83078690 - L1PB2 LINE L1 -2626 4241 3692 6207 60 21 57 chr17 2359790 2361974 -83076506 - SVA Other Other -518 1379 54 875 34 26 0 chr17 2361974 2362091 -83076389 + (GGGAGA)n Simple_repeat Simple_repeat 4 123 0 10899 198 44 79 chr17 2362091 2363895 -83074585 - L1PB2 LINE L1 -3174 3693 1828 2268 96 0 0 chr17 2363895 2364188 -83074292 - L1PB1 LINE L1 -1 6150 5858 10899 198 44 79 chr17 2364188 2364342 -83074138 - L1PB2 LINE L1 -5039 1828 1670 320 77 39 0 chr17 2364342 2364394 -83074086 - Alu SINE Alu 0 302 249 10899 198 44 79 chr17 2364394 2364486 -83073994 - L1PB2 LINE L1 -5197 1670 1576 2070 139 10 0 chr17 2364486 2364789 -83073691 - AluSx SINE Alu -6 306 1 10899 198 44 79 chr17 2364789 2366445 -83072035 - L1PB2 LINE L1 -5291 1576 1 409 275 107 0 chr17 2366457 2366588 -83071892 + MIR SINE MIR 117 261 -1 980 244 14 3 chr17 2366902 2367155 -83071325 + L1ME LINE L1 5419 5669 -493 2410 187 120 21 chr17 2367224 2367877 -83070603 - MER52A LTR ERV1 -955 800 4 313 294 24 0 chr17 2368124 2368209 -83070271 - MIR3 SINE MIR -45 163 77 21 0 0 0 chr17 2370502 2370523 -83067957 + AT_rich Low_complexity Low_complexity 1 21 0 200 261 58 0 chr17 2370803 2370872 -83067608 - MIR SINE MIR -93 169 97 297 303 42 34 chr17 2370914 2371033 -83067447 + L2 LINE L2 2953 3072 -200 246 312 21 64 chr17 2371866 2372007 -83066473 + L2 LINE L2 2933 3067 -205 656 292 88 22 chr17 2372224 2372498 -83065982 + L3 LINE CR1 1137 1428 -149 414 258 207 23 chr17 2372542 2372760 -83065720 - MIR SINE MIR -6 256 3 34 84 0 0 chr17 2373094 2373177 -83065303 + AT_rich Low_complexity Low_complexity 1 83 0 967 193 63 19 chr17 2373830 2374037 -83064443 + MER58A DNA MER1_type 1 216 -8 2359 59 3 11 chr17 2374038 2374348 -83064132 + AluSp SINE Alu 1 308 0 244 118 55 47 chr17 2374498 2374625 -83063855 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 606 206 168 29 chr17 2374631 2374840 -83063640 - MIR SINE MIR -18 244 7 21 0 0 0 chr17 2375747 2375768 -83062712 + GC_rich Low_complexity Low_complexity 1 21 0 1992 118 3 20 chr17 2376362 2376667 -83061813 - AluSx SINE Alu -12 300 1 2253 106 0 10 chr17 2377243 2377546 -83060934 + AluSx SINE Alu 1 300 -12 2594 241 92 13 chr17 2377758 2378549 -83059931 + L1ME2 LINE L1 5311 6164 0 263 212 42 76 chr17 2379237 2379355 -83059125 + L1MC4 LINE L1 7791 7904 -138 29 70 0 0 chr17 2379610 2379667 -83058813 + AT_rich Low_complexity Low_complexity 1 57 0 373 267 81 59 chr17 2380017 2380253 -83058227 + HAL1b LINE L1 476 716 -632 288 169 113 0 chr17 2380503 2380574 -83057906 + L1ME2 LINE L1 4783 4861 -1285 * 3658 164 19 15 chr17 2380554 2381226 -83057254 - L1P LINE L1 -1148 4998 4324 587 96 28 4 chr17 2381215 2381346 -83057134 + L1PA13 LINE L1 5943 6072 -93 * 435 225 78 35 chr17 2381353 2381495 -83056985 + L1ME2 LINE L1 5701 5848 -316 980 42 42 0 chr17 2381495 2381614 -83056866 + L1PA13 LINE L1 6037 6160 -3 1128 227 50 35 chr17 2381614 2382051 -83056429 + L1ME2 LINE L1 4829 6076 -88 2022 145 0 0 chr17 2382163 2382499 -83055981 - AluSx SINE Alu 0 336 1 342 273 53 17 chr17 2382549 2382717 -83055763 - L1M4 LINE L1 -779 5367 5197 27 0 0 0 chr17 2382787 2382814 -83055666 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr17 2382982 2383008 -83055472 + AT_rich Low_complexity Low_complexity 1 26 0 282 274 88 49 chr17 2383127 2383433 -83055047 - L1M4 LINE L1 -1252 4894 4577 378 346 34 19 chr17 2383889 2384158 -83054322 - L2 LINE L2 -868 2446 2174 1811 99 3 127 chr17 2384183 2384546 -83053934 + AluSx SINE Alu 5 326 0 1100 70 7 0 chr17 2384601 2384755 -83053725 - L1P4 LINE L1 -489 5672 5512 2430 81 3 0 chr17 2384995 2385303 -83053177 - AluY SINE Alu -2 309 1 1887 112 12 0 chr17 2385651 2385929 -83052551 + AluSg SINE Alu 28 310 0 1918 168 0 3 chr17 2385939 2386249 -83052231 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 2386249 2386271 -83052209 + AT_rich Low_complexity Low_complexity 1 22 0 736 339 85 60 chr17 2387758 2388019 -83050461 + L2 LINE L2 1950 2203 -1069 2122 136 10 7 chr17 2388019 2388511 -83049969 + AluSx SINE Alu 1 312 0 736 339 85 60 chr17 2388511 2389535 -83048945 + L2 LINE L2 2203 3261 -11 3574 55 23 5 chr17 2389943 2390383 -83048097 - L1PA8 LINE L1 0 6172 5725 1705 172 23 10 chr17 2390383 2390691 -83047789 + MLT2D LTR ERVL 55 366 -48 951 60 51 31 chr17 2390709 2391031 -83047449 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 1894 242 53 84 chr17 2392953 2393108 -83045372 - L1M4 LINE L1 -1131 5015 4857 728 53 21 21 chr17 2393108 2393242 -83045238 + L1PA2 LINE L1 6050 6183 0 1894 242 53 84 chr17 2393242 2393604 -83044876 - L1M4 LINE L1 -1289 4857 4485 6859 73 63 0 chr17 2393604 2395015 -83043465 - L1PA10 LINE L1 0 6168 4724 1894 242 53 84 chr17 2395015 2395443 -83043037 - L1M4 LINE L1 -1661 4485 4098 * 11904 172 7 18 chr17 2395439 2397498 -83040982 - L1P LINE L1 -1154 4992 2957 2046 115 11 3 chr17 2397498 2397784 -83040696 - AluSx SINE Alu -22 290 3 11904 172 7 18 chr17 2397784 2397942 -83040538 - L1P LINE L1 -3189 2957 2799 969 134 15 0 chr17 2398439 2398573 -83039907 + AluJo SINE Alu 1 136 -176 300 179 0 0 chr17 2398577 2398633 -83039847 - L1P LINE L1 -2085 4061 4006 778 156 170 7 chr17 2398652 2398787 -83039693 + AluJo SINE Alu 134 290 -22 246 62 0 0 chr17 2399042 2399074 -83039406 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 86 3 0 chr17 2399298 2399589 -83038891 - AluSp SINE Alu -21 292 1 349 270 79 53 chr17 2399977 2400129 -83038351 - MIR SINE MIR -43 219 64 1957 83 0 30 chr17 2400617 2400883 -83037597 + AluY SINE Alu 49 306 -5 251 273 13 0 chr17 2402371 2402448 -83036032 + GA-rich Low_complexity Low_complexity 1 78 0 2322 86 3 29 chr17 2402718 2403032 -83035448 + AluSg SINE Alu 5 310 0 191 269 30 30 chr17 2403043 2403110 -83035370 - L3 LINE CR1 -28 1549 1483 2249 82 0 7 chr17 2403261 2403552 -83034928 - AluY SINE Alu -22 289 1 260 192 39 0 chr17 2403557 2403609 -83034871 + MER5B DNA MER1_type 125 178 0 24 53 0 0 chr17 2404064 2404102 -83034378 + AT_rich Low_complexity Low_complexity 1 38 0 2452 88 0 0 chr17 2404460 2404768 -83033712 + AluSq SINE Alu 1 308 -5 546 253 67 108 chr17 2404774 2404980 -83033500 - L1M4 LINE L1 -1945 4201 3988 378 0 0 0 chr17 2404980 2405022 -83033458 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1775 144 0 11 chr17 2405027 2405290 -83033190 - AluSx SINE Alu -52 260 1 546 253 67 108 chr17 2405290 2405568 -83032912 - L1M4 LINE L1 -2162 3984 3731 2033 119 43 12 chr17 2405874 2406202 -83032278 - L1MA4 LINE L1 -6 6294 5957 797 318 41 11 chr17 2406699 2407139 -83031341 - HAL1b LINE L1 -689 659 207 634 147 9 0 chr17 2408571 2408680 -83029800 - L1MA9 LINE L1 -349 5963 5854 764 145 69 19 chr17 2408683 2408842 -83029638 + L1MA7 LINE L1 6124 6290 -1 2138 63 21 102 chr17 2408908 2409243 -83029237 - AluYb8 SINE Alu -8 310 3 772 223 36 72 chr17 2409293 2409544 -83028936 - L1MA9 LINE L1 -5 6286 6045 568 250 96 14 chr17 2410868 2411076 -83027404 - L2 LINE L2 0 3313 3089 269 297 48 41 chr17 2412241 2412386 -83026094 + MIR3 SINE MIR 31 176 -32 2318 93 0 37 chr17 2412829 2413152 -83025328 + AluSq SINE Alu 1 311 -2 369 301 41 67 chr17 2413307 2413652 -83024828 - L1ME LINE L1 -303 5818 5483 33 66 0 0 chr17 2413702 2413763 -83024717 + AT_rich Low_complexity Low_complexity 1 61 0 320 304 112 0 chr17 2413771 2413896 -83024584 - MIR SINE MIR -12 250 112 362 52 86 35 chr17 2413998 2414056 -83024424 - L1PA15 LINE L1 -3 6162 6102 4979 100 4 1 chr17 2414099 2414778 -83023702 - L1PA13 LINE L1 -49 6114 5434 12220 90 9 0 chr17 2414781 2416353 -83022127 - HERVL LTR ERVL -3328 2326 740 5767 87 10 33 chr17 2416358 2416843 -83021637 + L1PA10 LINE L1 5361 5821 -347 2086 101 11 0 chr17 2416843 2417121 -83021359 - AluSx SINE Alu -22 290 10 5767 87 10 33 chr17 2417121 2417459 -83021021 + L1PA10 LINE L1 5821 6165 -3 * 11353 163 41 18 chr17 2417441 2420727 -83017753 + L1MA5 LINE L1 2929 6290 -10 5477 30 0 0 chr17 2420954 2421551 -83016929 + L1PA3 LINE L1 5556 6152 -3 30 27 0 0 chr17 2421778 2421815 -83016665 + AT_rich Low_complexity Low_complexity 1 37 0 1148 330 96 53 chr17 2423202 2423915 -83014565 + L2 LINE L2 1907 2587 -685 2594 58 0 0 chr17 2423915 2424224 -83014256 - AluY SINE Alu -2 309 1 1148 330 96 53 chr17 2424224 2424520 -83013960 + L2 LINE L2 2587 2869 -403 2480 74 7 3 chr17 2424520 2424830 -83013650 - AluY SINE Alu 0 311 1 1148 330 96 53 chr17 2424830 2425115 -83013365 + L2 LINE L2 2869 3261 -11 2288 99 0 3 chr17 2425150 2425453 -83013027 - AluSp SINE Alu -11 302 1 506 200 156 56 chr17 2426234 2426394 -83012086 - MER5A DNA MER1_type 0 189 14 301 263 153 25 chr17 2426417 2426535 -83011945 + MER5B DNA MER1_type 46 178 0 240 364 27 53 chr17 2427164 2427389 -83011091 - L2 LINE L2 -402 2912 2694 699 301 10 5 chr17 2427880 2428086 -83010394 - ERVL LTR ERVL -617 5147 4941 227 390 70 0 chr17 2429113 2429213 -83009267 + L2 LINE L2 3141 3247 -25 23 68 0 0 chr17 2429715 2429759 -83008721 + AT_rich Low_complexity Low_complexity 1 44 0 5927 139 30 0 chr17 2430038 2431051 -83007429 - L1PA16 LINE L1 -3 6163 5131 192 226 274 0 chr17 2432002 2432064 -83006416 - MIR SINE MIR -107 155 77 511 262 16 40 chr17 2432826 2433024 -83005456 + MIR SINE MIR 10 200 -54 318 258 262 40 chr17 2434022 2434297 -83004183 - L1MC/D LINE L1 -496 5625 5408 369 221 26 0 chr17 2434586 2434663 -83003817 - MER58 DNA MER1_type -1 2419 2341 33 0 0 0 chr17 2434672 2434705 -83003775 + AT_rich Low_complexity Low_complexity 1 33 0 39276 38 5 1 chr17 2434708 2440188 -82998292 - L1PA4 LINE L1 0 6155 656 373 286 117 35 chr17 2440223 2440506 -82997974 - L1MC/D LINE L1 -896 5250 4945 2338 102 0 3 chr17 2440539 2440842 -82997638 - AluSx SINE Alu -10 302 1 262 114 0 0 chr17 2441029 2441064 -82997416 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 2441109 2441663 -82996817 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 2441665 2441736 -82996744 + L1P4 LINE L1 5017 5087 -1059 1198 28 0 14 chr17 2441737 2441879 -82996601 + MER11A LTR ERVK 1 140 -1126 13748 31 1 0 chr17 2441887 2444201 -82994279 - L1PA2 LINE L1 -2 6153 3838 31112 43 38 3 chr17 2444202 2448055 -82990425 - L1P LINE L1 -2157 3989 2 4256 127 30 33 chr17 2448055 2449024 -82989456 + MER11A LTR ERVK 119 1266 0 2796 85 3 2 chr17 2449024 2449561 -82988919 + L1P4 LINE L1 5083 5619 -549 266 161 107 0 chr17 2449553 2449609 -82988871 - L1MB4 LINE L1 -36 6144 6083 * 1393 144 21 20 chr17 2449581 2449861 -82988619 - L1MA4 LINE L1 -243 6054 5772 409 290 38 8 chr17 2449980 2450111 -82988369 - L1M4 LINE L1 -1533 4613 4479 331 345 98 0 chr17 2450349 2450543 -82987937 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 2450839 2450868 -82987612 + AT_rich Low_complexity Low_complexity 1 29 0 312 244 35 35 chr17 2450992 2451078 -82987402 - MIR SINE MIR -53 209 124 192 226 274 0 chr17 2452821 2452883 -82985597 + MIR SINE MIR 77 155 -107 5927 139 17 3 chr17 2453833 2454846 -82983634 + L1PA16 LINE L1 5131 6163 -3 23 68 0 0 chr17 2455125 2455169 -82983311 + AT_rich Low_complexity Low_complexity 1 44 0 227 390 70 0 chr17 2455671 2455771 -82982709 - L2 LINE L2 -25 3247 3141 2087 126 3 0 chr17 2456611 2456905 -82981575 + AluSx SINE Alu 1 295 -17 2254 95 0 0 chr17 2460330 2460640 -82977840 + AluSx SINE Alu 1 310 0 236 331 88 11 chr17 2460871 2461052 -82977428 + L2 LINE L2 2329 2523 -791 1562 182 36 0 chr17 2463101 2463381 -82975099 + AluJo SINE Alu 1 290 -22 299 248 78 43 chr17 2463549 2463690 -82974790 - L2 LINE L2 0 3313 3168 1475 224 71 6 chr17 2464407 2464759 -82973721 - L1ME2 LINE L1 -21 6143 5769 893 247 151 49 chr17 2464908 2465439 -82973041 + L1MEc LINE L1 31 615 -5781 204 120 40 20 chr17 2465523 2465573 -82972907 + (TA)n Simple_repeat Simple_repeat 2 52 0 248 70 23 0 chr17 2465590 2465633 -82972847 + (TA)n Simple_repeat Simple_repeat 2 45 0 1070 106 0 0 chr17 2465636 2465777 -82972703 - AluSg/x SINE Alu -18 294 154 2229 118 0 16 chr17 2465785 2466091 -82972389 - AluSc SINE Alu -8 301 1 494 332 80 27 chr17 2466093 2466620 -82971860 - L1MB4 LINE L1 -859 5287 4733 336 278 128 0 chr17 2466876 2467009 -82971471 - L1ME2 LINE L1 -502 5660 5511 * 5004 36 24 36 chr17 2467005 2467663 -82970817 - L1PA5 LINE L1 -1188 4958 4309 7933 40 0 2 chr17 2467663 2468861 -82969619 + L1PA5 LINE L1 4957 6154 0 2271 107 0 0 chr17 2468975 2469273 -82969207 - AluSx SINE Alu -14 298 1 462 316 7 0 chr17 2469460 2469596 -82968884 + MIR SINE MIR 51 187 -75 415 301 34 0 chr17 2469667 2469813 -82968667 - MIR SINE MIR -48 214 64 187 318 118 0 chr17 2470900 2470985 -82967495 - MIR SINE MIR -56 152 58 441 293 145 40 chr17 2473095 2473494 -82964986 - L1MB4 LINE L1 -3026 3120 2680 308 246 16 82 chr17 2474141 2474263 -82964217 - HAL1b LINE L1 -441 907 794 770 286 64 75 chr17 2474308 2475131 -82963349 - HAL1b LINE L1 -437 911 98 22 0 0 0 chr17 2475360 2475382 -82963098 + AT_rich Low_complexity Low_complexity 1 22 0 3472 83 7 2 chr17 2475419 2475864 -82962616 - L1PA10 LINE L1 0 6168 5722 184 79 79 0 chr17 2478377 2478415 -82960065 + A-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 2480424 2480465 -82958015 + (CA)n Simple_repeat Simple_repeat 2 42 0 525 259 77 79 chr17 2480557 2480998 -82957482 - L1ME LINE L1 -303 5818 5379 855 127 19 83 chr17 2480999 2481156 -82957324 - Tigger3(Golem) DNA MER2_type 0 3038 2892 300 258 16 0 chr17 2481169 2481231 -82957249 - Tigger3(Golem) DNA MER2_type -2966 63 1 264 100 0 0 chr17 2481265 2481305 -82957175 + (T)n Simple_repeat Simple_repeat 1 40 0 28 0 0 0 chr17 2481660 2481688 -82956792 + AT_rich Low_complexity Low_complexity 1 28 0 1238 227 64 24 chr17 2481746 2482121 -82956359 + L1ME LINE L1 451 840 -5230 769 213 11 32 chr17 2482115 2482303 -82956177 + L1PB4 LINE L1 5938 6121 -35 * 421 192 0 7 chr17 2482294 2482397 -82956083 + L1PB4 LINE L1 5987 6086 -68 * 396 204 231 0 chr17 2482368 2482476 -82956004 - MLT1D LTR MaLR -372 133 1 * 7050 54 10 11 chr17 2482476 2483634 -82954846 + L1PA7 LINE L1 4993 6154 0 189 352 68 0 chr17 2483635 2483723 -82954757 + MIR SINE MIR 157 250 -12 1733 171 7 3 chr17 2483740 2484045 -82954435 - AluJb SINE Alu -6 306 1 363 267 69 30 chr17 2484107 2484238 -82954242 - MIR SINE MIR -66 196 61 2246 91 3 0 chr17 2486027 2486324 -82952156 + AluSp SINE Alu 1 298 -15 269 94 47 16 chr17 2486505 2486569 -82951911 + GA-rich Low_complexity Low_complexity 1 66 0 215 337 22 11 chr17 2486896 2486985 -82951495 - L3 LINE CR1 -5 1572 1483 1882 99 32 7 chr17 2487136 2487418 -82951062 - AluY SINE Alu -22 289 1 641 239 6 44 chr17 2487572 2487731 -82950749 + MER5B DNA MER1_type 6 158 -20 539 213 7 85 chr17 2487995 2488020 -82950460 - MER5B DNA MER1_type -39 139 114 2384 57 0 7 chr17 2488020 2488317 -82950163 + AluSc SINE Alu 2 296 -13 539 213 7 85 chr17 2488317 2488432 -82950048 - MER5B DNA MER1_type -64 114 10 2504 37 0 3 chr17 2488981 2489279 -82949201 + AluY SINE Alu 1 297 -14 1840 127 22 0 chr17 2489737 2490041 -82948439 - AluSx SINE Alu 0 310 1 723 232 41 5 chr17 2490198 2490392 -82948088 - L1MA9 LINE L1 -39 6273 6073 537 253 126 16 chr17 2491737 2491919 -82946561 - L2 LINE L2 0 3313 3112 195 25 75 25 chr17 2492151 2492191 -82946289 + T-rich Low_complexity Low_complexity 4 45 0 2303 59 3 20 chr17 2492323 2492629 -82945851 + AluY SINE Alu 1 301 -10 26 0 0 0 chr17 2492997 2493023 -82945457 + AT_rich Low_complexity Low_complexity 1 26 0 6595 64 9 32 chr17 2493248 2494899 -82943581 + SVA Other Other 200 1386 0 237 319 121 17 chr17 2494918 2495034 -82943446 - L3 LINE CR1 -48 1529 1402 1046 190 121 6 chr17 2495732 2496026 -82942454 - MLT1A1 LTR MaLR 0 374 4 357 362 28 11 chr17 2497077 2497254 -82941226 - MER5A DNA MER1_type -3 186 7 209 363 59 15 chr17 2497363 2497498 -82940982 - MIR3 SINE MIR -66 142 2 278 236 0 132 chr17 2497583 2497689 -82940791 + MIR SINE MIR 28 119 -143 752 272 112 4 chr17 2497705 2497937 -82940543 + MIR SINE MIR 6 262 0 291 309 147 29 chr17 2498156 2498292 -82940188 + MIR3 SINE MIR 17 168 -40 1825 70 4 0 chr17 2498973 2499214 -82939266 + AluSq SINE Alu 64 305 -8 2314 65 0 7 chr17 2499566 2499872 -82938608 + AluY SINE Alu 1 304 -7 2107 87 0 0 chr17 2499971 2500247 -82938233 + AluSx SINE Alu 1 276 -36 242 114 0 23 chr17 2500259 2500303 -82938177 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr17 2500305 2500325 -82938155 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 280 255 268 33 chr17 2501540 2501693 -82936787 + MIR SINE MIR 74 262 0 195 264 0 38 chr17 2501703 2501756 -82936724 - MIR SINE MIR 0 262 212 227 298 21 53 chr17 2502050 2502144 -82936336 + L3 LINE CR1 1279 1369 -208 22 56 0 0 chr17 2502190 2502226 -82936254 + AT_rich Low_complexity Low_complexity 1 36 0 2133 86 11 0 chr17 2502589 2502893 -82935587 - AluSq SINE Alu 0 308 2 263 320 80 51 chr17 2503956 2504131 -82934349 + MIR SINE MIR 17 196 -66 2186 65 0 0 chr17 2506006 2506282 -82932198 + AluY SINE Alu 35 310 -1 2307 68 0 10 chr17 2506699 2506994 -82931486 + AluY SINE Alu 1 292 -19 432 340 114 40 chr17 2507537 2508011 -82930469 + L2 LINE L2 2350 2858 -456 208 303 69 41 chr17 2508060 2508205 -82930275 - L2 LINE L2 -852 2462 2314 491 255 64 43 chr17 2508205 2508393 -82930087 - MLT1J LTR MaLR -13 498 307 1640 178 0 26 chr17 2508911 2508991 -82929489 + AluJo SINE Alu 1 82 -230 4196 118 25 67 chr17 2508991 2509712 -82928768 - LTR8 LTR ERV1 0 691 1 1640 178 0 26 chr17 2509712 2509934 -82928546 + AluJo SINE Alu 82 295 -17 298 333 65 38 chr17 2511301 2511487 -82926993 + MIR SINE MIR 46 236 -26 24 0 0 0 chr17 2511567 2511591 -82926889 + AT_rich Low_complexity Low_complexity 1 24 0 1355 37 0 0 chr17 2511591 2511752 -82926728 - L1PA4 LINE L1 -3 6152 5992 1881 133 27 3 chr17 2512453 2512754 -82925726 - AluSx SINE Alu -4 308 1 301 268 89 8 chr17 2512887 2513010 -82925470 + L2 LINE L2 2927 3059 -213 422 282 110 6 chr17 2513041 2513204 -82925276 - L2 LINE L2 -7 3306 3127 554 217 59 12 chr17 2513368 2513613 -82924867 - MER5C DNA MER1_type -1 323 9 1741 149 35 0 chr17 2513816 2514105 -82924375 - AluJo SINE Alu -10 302 4 827 94 0 0 chr17 2514216 2514333 -82924147 + AluSp/q SINE Alu 188 304 -9 1573 236 52 11 chr17 2514481 2514733 -82923747 - LTR40b LTR ERVL 0 462 183 2379 70 0 3 chr17 2514733 2515032 -82923448 - AluSq SINE Alu -15 298 1 1573 236 52 11 chr17 2515032 2515223 -82923257 - LTR40b LTR ERVL -279 183 1 23 33 0 0 chr17 2515537 2515567 -82922913 + AT_rich Low_complexity Low_complexity 1 30 0 339 65 0 0 chr17 2515839 2515885 -82922595 + (TG)n Simple_repeat Simple_repeat 1 46 0 395 282 126 11 chr17 2516488 2516662 -82921818 - MLT1L LTR MaLR -413 202 9 2064 131 0 0 chr17 2517173 2517479 -82921001 + AluSx SINE Alu 1 306 -6 771 241 72 62 chr17 2518355 2518780 -82919700 + L1ME LINE L1 5344 5777 -385 342 195 133 9 chr17 2519055 2519168 -82919312 + L1MC2 LINE L1 6218 6344 0 551 366 51 6 chr17 2519773 2520087 -82918393 + L3 LINE CR1 520 847 -730 333 360 55 6 chr17 2520091 2520255 -82918225 + L3 LINE CR1 1012 1183 -394 2052 127 7 3 chr17 2520263 2520571 -82917909 + AluSx SINE Alu 1 309 -3 273 308 64 39 chr17 2520579 2520666 -82917814 + L3 LINE CR1 1276 1370 -207 1928 153 3 0 chr17 2520666 2520974 -82917506 - AluJo SINE Alu -2 310 2 273 308 64 39 chr17 2520974 2521042 -82917438 + L3 LINE CR1 1370 1435 -142 880 253 91 103 chr17 2521259 2521785 -82916695 + MLT1H LTR MaLR 30 549 0 2060 136 0 3 chr17 2522198 2522506 -82915974 - AluSx SINE Alu -5 307 1 378 333 165 7 chr17 2522513 2522798 -82915682 - L3 LINE CR1 -389 1188 859 249 168 182 0 chr17 2522819 2522884 -82915596 + MER5A DNA MER1_type 7 98 -91 2056 99 0 53 chr17 2523962 2524285 -82914195 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 2524359 2524404 -82914076 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 746 233 30 6 chr17 2524739 2524932 -82913548 - MER4C LTR ERV1 0 456 276 1879 121 22 35 chr17 2524951 2525264 -82913216 + AluSx SINE Alu 1 309 -3 530 160 19 122 chr17 2525306 2525413 -82913067 - MER4C LTR ERV1 -201 349 290 2132 110 0 0 chr17 2525413 2525713 -82912767 + AluSx SINE Alu 7 306 -6 530 160 19 122 chr17 2525713 2525839 -82912641 - MER4C LTR ERV1 -260 290 153 306 261 0 0 chr17 2525876 2525941 -82912539 - MIR SINE MIR -152 110 46 1769 151 35 0 chr17 2525943 2526227 -82912253 + AluSx SINE Alu 1 294 -18 1895 131 3 0 chr17 2526586 2526876 -82911604 + AluSx SINE Alu 1 291 -21 247 375 18 0 chr17 2527526 2527638 -82910842 - MIR SINE MIR -62 146 33 457 222 67 22 chr17 2528014 2528149 -82910331 + MIR3 SINE MIR 33 173 -35 514 140 39 39 chr17 2528316 2528495 -82909985 + CT-rich Low_complexity Low_complexity 1 179 0 223 167 0 24 chr17 2528495 2528537 -82909943 + C-rich Low_complexity Low_complexity 2 42 0 302 266 156 40 chr17 2528886 2529187 -82909293 - L2 LINE L2 -11 3261 2926 1951 108 3 0 chr17 2529322 2529610 -82908870 + AluSq SINE Alu 21 309 -4 189 94 0 0 chr17 2530108 2530140 -82908340 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 790 133 9 0 chr17 2530142 2530255 -82908225 - AluJo SINE Alu -33 279 166 795 141 0 8 chr17 2530399 2530520 -82907960 - AluJo SINE Alu -146 166 47 1944 96 55 17 chr17 2530617 2530908 -82907572 + AluSx SINE Alu 1 302 -10 2194 76 24 0 chr17 2530913 2531202 -82907278 + AluY SINE Alu 2 297 -14 478 291 59 97 chr17 2531221 2531587 -82906893 + L1MC4a LINE L1 5260 5149 -1013 2248 85 0 0 chr17 2531587 2531880 -82906600 - AluSx SINE Alu -19 293 1 478 291 59 97 chr17 2531880 2532203 -82906277 + L1MC4a LINE L1 5148 5482 -680 1776 137 7 10 chr17 2532367 2532649 -82905831 + AluJb SINE Alu 1 283 -29 207 61 0 30 chr17 2532649 2532682 -82905798 + (TAAAA)n Simple_repeat Simple_repeat 2 100 0 23 0 0 0 chr17 2532755 2532778 -82905702 + AT_rich Low_complexity Low_complexity 1 23 0 186 250 132 0 chr17 2532867 2532943 -82905537 - MIR SINE MIR -79 183 98 772 97 142 0 chr17 2532943 2533056 -82905424 + AluSc SINE Alu 154 282 -27 331 26 0 0 chr17 2533056 2533095 -82905385 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 308 304 69 0 chr17 2533540 2533642 -82904838 - L2 LINE L2 0 3272 3164 2328 96 0 7 chr17 2534079 2534382 -82904098 + AluSx SINE Alu 1 301 -11 405 302 129 16 chr17 2534796 2534939 -82903541 + L2 LINE L2 3037 3162 -151 2337 86 10 16 chr17 2534939 2535252 -82903228 - AluSx SINE Alu -1 311 1 405 302 129 16 chr17 2535252 2535356 -82903124 + L2 LINE L2 3162 3312 -1 239 307 44 18 chr17 2536268 2536382 -82902098 + L2 LINE L2 2705 2821 -493 2294 114 3 0 chr17 2536994 2537301 -82901179 - AluSg SINE Alu -2 308 1 2205 118 0 7 chr17 2537526 2537832 -82900648 - AluJb SINE Alu -8 304 1 188 280 84 28 chr17 2537860 2537967 -82900513 + L3 LINE CR1 1453 1565 -12 2009 126 4 0 chr17 2538026 2538304 -82900176 - AluSx SINE Alu -33 279 1 1140 88 0 0 chr17 2538304 2538441 -82900039 - AluSq/x SINE Alu -175 137 1 2454 97 3 0 chr17 2538954 2539263 -82899217 - AluSq SINE Alu -3 310 1 2032 115 45 0 chr17 2539501 2539789 -82898691 - AluSx SINE Alu -11 301 1 428 233 60 17 chr17 2540619 2540735 -82897745 + MIR3 SINE MIR 82 202 -6 2441 103 0 0 chr17 2540789 2541100 -82897380 + AluSq SINE Alu 1 311 -2 25 31 0 0 chr17 2541120 2541152 -82897328 + AT_rich Low_complexity Low_complexity 1 32 0 260 235 224 20 chr17 2543064 2543162 -82895318 + L3 LINE CR1 1447 1564 -13 263 293 71 36 chr17 2543666 2543806 -82894674 - MIR3 SINE MIR -56 152 8 6902 55 6 8 chr17 2545014 2545981 -82892499 + L1PA8A LINE L1 5163 6127 -4 203 138 0 0 chr17 2546340 2546369 -82892111 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1836 98 124 0 chr17 2546403 2546669 -82891811 - AluSq SINE Alu -14 299 1 201 276 17 17 chr17 2547581 2547639 -82890841 - L3 LINE CR1 -7 1570 1513 * 233 274 59 88 chr17 2547628 2547730 -82890750 - MER5B DNA MER1_type -4 174 76 2421 97 0 0 chr17 2547922 2548232 -82890248 - AluSg SINE Alu 0 310 1 754 269 187 35 chr17 2548540 2548946 -82889534 - L2 LINE L2 -1 3312 2845 209 309 117 97 chr17 2549020 2549088 -82889392 + MER5B DNA MER1_type 18 83 -106 390 214 79 84 chr17 2549088 2549150 -82889330 - MER5B DNA MER1_type -1 177 116 2283 84 10 3 chr17 2549150 2549446 -82889034 + AluY SINE Alu 1 298 -13 390 214 79 84 chr17 2549446 2549561 -82888919 - MER5B DNA MER1_type -62 116 1 209 309 117 97 chr17 2549561 2549658 -82888822 + MER5B DNA MER1_type 83 189 0 292 204 46 99 chr17 2549736 2549888 -82888592 + L1ME1 LINE L1 6005 6148 -18 364 260 55 87 chr17 2549902 2550029 -82888451 - MER5B DNA MER1_type -49 129 7 328 272 0 0 chr17 2550099 2550180 -82888300 - MER5A DNA MER1_type -80 109 29 * 364 235 202 8 chr17 2550176 2550295 -82888185 + MER5A DNA MER1_type 48 189 0 200 351 90 9 chr17 2550467 2550578 -82887902 + L2 LINE L2 3186 3305 -8 1942 147 7 10 chr17 2550713 2551013 -82887467 - AluJo SINE Alu -13 299 1 345 291 86 0 chr17 2551495 2551612 -82886868 + L2 LINE L2 3187 3313 0 13203 126 48 43 chr17 2551773 2552866 -82885614 + Tigger1 DNA MER2_type 11 1097 -1321 2490 69 0 7 chr17 2552866 2553169 -82885311 - AluY SINE Alu -10 301 1 13203 126 48 43 chr17 2553169 2554034 -82884446 + Tigger1 DNA MER2_type 1097 1987 -431 2175 121 0 7 chr17 2554034 2554340 -82884140 + AluSx SINE Alu 1 304 -8 13203 126 48 43 chr17 2554340 2554775 -82883705 + Tigger1 DNA MER2_type 1987 2418 0 267 31 0 0 chr17 2555568 2555600 -82882880 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 590 231 8 45 chr17 2556157 2556291 -82882189 + MIR SINE MIR 121 249 -13 2359 108 0 3 chr17 2556910 2557224 -82881256 - AluSp SINE Alu 0 313 1 420 327 133 65 chr17 2557251 2557766 -82880714 + L2 LINE L2 2724 3270 -2 2391 106 0 0 chr17 2558112 2558423 -82880057 - AluSx SINE Alu -1 311 1 2051 125 0 3 chr17 2559044 2559333 -82879147 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 2559354 2559392 -82879088 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 190 265 20 0 chr17 2559654 2559703 -82878777 + MIR SINE MIR 168 217 -45 252 298 21 0 chr17 2560162 2560256 -82878224 + L1ME LINE L1 5558 5653 -468 6526 24 0 0 chr17 2560531 2561279 -82877201 + L1PA3 LINE L1 5408 6155 0 1097 24 0 0 chr17 2561467 2561593 -82876887 + L1PA5 LINE L1 6020 6145 -9 219 307 94 8 chr17 2561925 2562052 -82876428 + L2 LINE L2 2945 3082 -190 634 184 0 0 chr17 2562117 2562226 -82876254 - MER63 DNA MER1_type 0 1061 953 1585 127 19 0 chr17 2562232 2562491 -82875989 + L1MA9 LINE L1 6044 6307 -5 879 242 33 25 chr17 2562520 2562580 -82875900 - MER63 DNA MER1_type -96 966 908 2153 125 0 3 chr17 2562580 2562867 -82875613 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 2562867 2562898 -82875582 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2153 125 0 3 chr17 2562898 2562913 -82875567 + AluSx SINE Alu 288 302 -10 879 242 33 25 chr17 2562913 2563096 -82875384 - MER63 DNA MER1_type -154 908 721 897 170 105 0 chr17 2563098 2563298 -82875182 + MER44D DNA MER2_type 1 491 -118 2151 93 11 0 chr17 2563354 2563632 -82874848 + AluSx SINE Alu 30 310 -2 298 127 28 42 chr17 2563634 2563705 -82874775 - MER63 DNA MER1_type -740 190 121 * 721 149 0 25 chr17 2563703 2563824 -82874656 + MER44D DNA MER2_type 488 605 0 * 2178 189 38 34 chr17 2563824 2564224 -82874256 - MER63C DNA MER1_type -472 588 191 2262 114 7 0 chr17 2564224 2564530 -82873950 + AluSx SINE Alu 1 308 -4 2178 189 38 34 chr17 2564530 2564680 -82873800 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 2564680 2564711 -82873769 + (CA)n Simple_repeat Simple_repeat 2 32 0 2178 189 38 34 chr17 2564711 2564745 -82873735 - MER63C DNA MER1_type -1027 33 1 228 279 0 44 chr17 2564873 2564941 -82873539 + MIR SINE MIR 79 143 -65 832 188 0 0 chr17 2565476 2565609 -82872871 + FLAM_C SINE Alu 1 133 0 2258 89 0 0 chr17 2565824 2566105 -82872375 - AluSx SINE Alu -30 282 2 1158 201 82 11 chr17 2566129 2566408 -82872072 + L1MB2 LINE L1 5868 6166 -5 2058 109 31 14 chr17 2566408 2566701 -82871779 - AluSx SINE Alu -14 298 1 2185 125 3 0 chr17 2566983 2567287 -82871193 + AluSq SINE Alu 1 305 -8 333 137 0 0 chr17 2567379 2567430 -82871050 - Alu SINE Alu -253 55 5 317 269 82 113 chr17 2567921 2568371 -82870109 + L2 LINE L2 2837 3272 0 442 201 8 8 chr17 2568371 2568505 -82869975 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 2568517 2568642 -82869838 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 190 337 58 0 chr17 2568661 2568747 -82869733 - MIR SINE MIR -113 149 59 260 225 202 0 chr17 2569500 2569589 -82868891 + MIR3 SINE MIR 82 188 -20 391 279 51 7 chr17 2570025 2570199 -82868281 + MIR3 SINE MIR 4 184 -67 414 269 30 78 chr17 2571497 2571560 -82866920 + MER5B DNA MER1_type 1 65 -113 2386 102 3 3 chr17 2571560 2571873 -82866607 + AluSq SINE Alu 1 313 0 414 269 30 78 chr17 2571873 2571976 -82866504 + MER5B DNA MER1_type 65 159 -19 1337 217 174 49 chr17 2573880 2574283 -82864197 + L2 LINE L2 2607 2958 -355 2368 93 0 0 chr17 2574283 2574583 -82863897 - AluSc SINE Alu -9 300 1 1337 217 174 49 chr17 2574583 2574794 -82863686 + L2 LINE L2 2958 3313 0 910 116 20 20 chr17 2575057 2575204 -82863276 + AluSg/x SINE Alu 161 307 -5 304 286 18 78 chr17 2575214 2575431 -82863049 + L1ME1 LINE L1 5955 6158 -8 2330 108 0 3 chr17 2625776 2626090 -82812390 - AluSp SINE Alu 0 313 1 295 367 72 4 chr17 2626117 2626354 -82812126 + L2 LINE L2 2724 2976 -338 278 284 102 31 chr17 2626505 2626632 -82811848 + L2 LINE L2 3176 3311 -2 2367 104 0 0 chr17 2626981 2627289 -82811191 - AluSx SINE Alu -4 308 1 2014 125 0 3 chr17 2627910 2628199 -82810281 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 2628220 2628258 -82810222 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 269 298 21 0 chr17 2629028 2629122 -82809358 + L1ME LINE L1 5558 5653 -468 6111 18 0 0 chr17 2629397 2630080 -82808400 + L1PA3 LINE L1 5408 6090 -65 500 246 8 45 chr17 2630654 2630788 -82807692 - MIR SINE MIR -13 249 121 267 31 0 0 chr17 2631345 2631377 -82807103 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 11100 117 31 48 chr17 2632170 2632605 -82805875 - Tigger1 DNA MER2_type 0 2418 1977 2149 121 0 7 chr17 2632605 2632911 -82805569 - AluSx SINE Alu -8 304 1 11100 117 31 48 chr17 2632911 2633776 -82804704 - Tigger1 DNA MER2_type -441 1977 1153 2476 67 0 7 chr17 2633776 2634081 -82804399 + AluY SINE Alu 1 298 -13 11100 117 31 48 chr17 2634081 2634649 -82803831 - Tigger1 DNA MER2_type -1265 1153 577 223 327 27 9 chr17 2635033 2635143 -82803337 + L2 LINE L2 2971 3082 -190 648 184 0 0 chr17 2635208 2635317 -82803163 - MER63 DNA MER1_type 0 1061 953 1649 127 19 0 chr17 2635323 2635582 -82802898 + L1MA9 LINE L1 6044 6307 -5 896 242 33 25 chr17 2635611 2635671 -82802809 - MER63 DNA MER1_type -96 965 907 2044 125 0 3 chr17 2635671 2635958 -82802522 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 2635958 2635989 -82802491 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2044 125 0 3 chr17 2635989 2636004 -82802476 + AluSx SINE Alu 288 302 -10 896 242 33 25 chr17 2636004 2636187 -82802293 - MER63 DNA MER1_type -154 907 720 887 170 105 0 chr17 2636189 2636389 -82802091 + MER44D DNA MER2_type 1 491 -118 2042 93 11 0 chr17 2636445 2636723 -82801757 + AluSx SINE Alu 30 310 -2 288 127 28 42 chr17 2636725 2636796 -82801684 - MER63 DNA MER1_type -740 190 121 * 724 149 0 25 chr17 2636794 2636915 -82801565 + MER44D DNA MER2_type 488 605 0 * 2147 189 38 34 chr17 2636915 2637315 -82801165 - MER63C DNA MER1_type -472 588 191 2143 117 3 0 chr17 2637315 2637622 -82800858 + AluSx SINE Alu 1 308 -4 2147 189 38 34 chr17 2637622 2637772 -82800708 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 2637772 2637803 -82800677 + (CA)n Simple_repeat Simple_repeat 2 32 0 2147 189 38 34 chr17 2637803 2637837 -82800643 - MER63C DNA MER1_type -1027 33 1 220 281 0 0 chr17 2637975 2638032 -82800448 + MIR SINE MIR 87 143 -65 832 188 0 0 chr17 2638568 2638701 -82799779 + FLAM_C SINE Alu 1 133 0 2143 89 0 0 chr17 2638916 2639197 -82799283 - AluSx SINE Alu -30 282 2 1170 201 82 11 chr17 2639221 2639500 -82798980 + L1MB2 LINE L1 5868 6166 -5 1937 109 31 14 chr17 2639500 2639793 -82798687 - AluSx SINE Alu -14 298 1 2074 125 3 0 chr17 2640075 2640379 -82798101 + AluSq SINE Alu 1 305 -8 348 137 0 0 chr17 2640471 2640522 -82797958 - Alu SINE Alu -245 55 5 333 291 98 85 chr17 2641064 2641463 -82797017 + L2 LINE L2 2869 3272 0 442 201 8 8 chr17 2641463 2641597 -82796883 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 2641609 2641734 -82796746 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 184 337 58 0 chr17 2641753 2641839 -82796641 - MIR SINE MIR -113 149 59 6981 55 17 0 chr17 2642935 2643902 -82794578 - L1PA8A LINE L1 -4 6127 5163 246 321 57 21 chr17 2645110 2645250 -82793230 + MIR3 SINE MIR 8 152 -56 237 280 196 9 chr17 2645745 2645852 -82792628 - L3 LINE CR1 -4 1573 1447 25 31 0 0 chr17 2647764 2647796 -82790684 + AT_rich Low_complexity Low_complexity 1 32 0 2313 105 0 0 chr17 2647814 2648127 -82790353 - AluSq SINE Alu 0 313 1 404 233 60 17 chr17 2648181 2648297 -82790183 - MIR3 SINE MIR -6 202 82 1926 111 49 0 chr17 2649127 2649415 -82789065 + AluSq SINE Alu 1 302 -11 2325 97 3 0 chr17 2649653 2649962 -82788518 + AluSq SINE Alu 1 310 -3 1081 88 0 0 chr17 2650475 2650612 -82787868 + AluSq/x SINE Alu 1 137 -175 1901 126 4 0 chr17 2650612 2650890 -82787590 + AluSx SINE Alu 1 279 -33 473 346 197 10 chr17 2650939 2651084 -82787396 - L3 LINE CR1 -2 1575 1458 1990 134 0 7 chr17 2651084 2651390 -82787090 + AluJb SINE Alu 1 304 -8 473 346 197 10 chr17 2651390 2651555 -82786925 - L3 LINE CR1 -119 1458 1325 2108 138 0 3 chr17 2651555 2651867 -82786613 - AluSx SINE Alu -1 311 1 473 346 197 10 chr17 2651867 2652159 -82786321 - L3 LINE CR1 -252 1325 859 238 149 149 0 chr17 2652198 2652245 -82786235 + MER5A DNA MER1_type 45 98 -91 1073 96 11 0 chr17 2653073 2653250 -82785230 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 780 121 0 0 chr17 2653266 2653398 -82785082 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 203 167 0 21 chr17 2653520 2653568 -82784912 + C-rich Low_complexity Low_complexity 2 48 0 338 266 156 40 chr17 2653917 2654218 -82784262 - L2 LINE L2 -11 3261 2926 1988 108 3 0 chr17 2654353 2654641 -82783839 + AluSq SINE Alu 21 309 -4 811 148 0 21 chr17 2655137 2655279 -82783201 - AluJo SINE Alu 0 312 174 456 149 0 14 chr17 2655434 2655508 -82782972 - AluJo SINE Alu -146 166 94 382 281 51 7 chr17 2656070 2656244 -82782236 + MIR3 SINE MIR 4 184 -67 419 309 51 34 chr17 2657542 2657605 -82780875 + MER5B DNA MER1_type 1 61 -117 2070 96 3 17 chr17 2657605 2657930 -82780550 + AluSq SINE Alu 1 313 0 419 309 51 34 chr17 2657930 2658041 -82780439 + MER5B DNA MER1_type 61 178 0 1235 225 171 45 chr17 2659927 2660330 -82778150 + L2 LINE L2 2607 2958 -355 2253 93 0 0 chr17 2660330 2660631 -82777849 - AluSc SINE Alu -8 301 1 1235 225 171 45 chr17 2660631 2660842 -82777638 + L2 LINE L2 2958 3313 0 850 128 20 34 chr17 2661105 2661253 -82777227 + AluSc SINE Alu 159 304 -5 352 290 18 77 chr17 2661259 2661480 -82777000 + L1ME1 LINE L1 5951 6158 -8 238 267 238 0 chr17 2661605 2661710 -82776770 + MIR SINE MIR 17 146 -62 457 178 12 41 chr17 2661962 2662131 -82776349 + CT-rich Low_complexity Low_complexity 4 167 0 326 302 86 37 chr17 2662254 2662522 -82775958 + L1MC4a LINE L1 5652 5932 -1876 1814 137 7 10 chr17 2662678 2663003 -82775477 + AluJb SINE Alu 1 312 0 23 0 0 0 chr17 2663066 2663089 -82775391 + AT_rich Low_complexity Low_complexity 1 23 0 183 250 132 0 chr17 2663178 2663254 -82775226 - MIR SINE MIR -79 183 98 767 97 142 0 chr17 2663254 2663406 -82775074 + AluSc SINE Alu 154 321 0 293 325 57 8 chr17 2663851 2663974 -82774506 - L2 LINE L2 0 3313 3185 2206 96 0 7 chr17 2664390 2664693 -82773787 + AluSx SINE Alu 1 301 -11 2221 90 10 6 chr17 2665252 2665563 -82772917 - AluSx SINE Alu 0 312 1 365 265 20 10 chr17 2665565 2665667 -82772813 + L2 LINE L2 3169 3271 -1 238 307 44 18 chr17 2666579 2666693 -82771787 + L2 LINE L2 2705 2821 -493 2168 114 3 0 chr17 2667305 2667612 -82770868 - AluSg SINE Alu -2 308 1 2082 99 0 53 chr17 2668021 2668344 -82770136 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 2668418 2668463 -82770017 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 753 235 18 10 chr17 2668798 2668991 -82769489 - MER4C LTR ERV1 0 456 276 1893 119 26 35 chr17 2669010 2669322 -82769158 + AluSx SINE Alu 1 309 -3 514 165 19 122 chr17 2669364 2669471 -82769009 - MER4C LTR ERV1 -201 349 290 2162 110 0 0 chr17 2669471 2669771 -82768709 + AluSx SINE Alu 7 306 -6 514 165 19 122 chr17 2669771 2669897 -82768583 - MER4C LTR ERV1 -260 290 153 297 261 0 0 chr17 2669934 2669999 -82768481 - MIR SINE MIR -152 110 46 1798 151 35 0 chr17 2670001 2670285 -82768195 + AluSx SINE Alu 1 294 -18 1929 131 3 0 chr17 2670644 2670934 -82767546 + AluSx SINE Alu 1 291 -21 261 375 18 0 chr17 2671584 2671696 -82766784 - MIR SINE MIR -62 146 33 442 222 67 22 chr17 2672072 2672207 -82766273 + MIR3 SINE MIR 33 173 -35 560 277 20 7 chr17 2672544 2672692 -82765788 - L2 LINE L2 -3 3310 3161 851 177 30 3 chr17 2672827 2673206 -82765274 + (TGGA)n Simple_repeat Simple_repeat 1 389 0 770 121 42 0 chr17 2673222 2673388 -82765092 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2524 56 0 0 chr17 2673827 2674132 -82764348 - AluY SINE Alu -6 305 1 2227 112 0 13 chr17 2675179 2675492 -82762988 - AluSg SINE Alu 0 310 2 225 0 0 0 chr17 2675492 2675517 -82762963 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2245 81 0 3 chr17 2675517 2675802 -82762678 - AluSx SINE Alu -28 284 1 314 314 133 26 chr17 2676299 2676751 -82761729 + L2 LINE L2 2306 2805 -509 298 293 73 32 chr17 2677478 2677601 -82760879 - MIR SINE MIR -8 254 127 290 340 112 5 chr17 2678533 2678730 -82759750 - L3 LINE CR1 -396 1181 964 2224 98 3 3 chr17 2679206 2679513 -82758967 + AluSx SINE Alu 4 310 -2 517 304 63 8 chr17 2681617 2681837 -82756643 + MIR SINE MIR 32 260 -2 1404 113 24 0 chr17 2683017 2683230 -82755250 + AluSg/x SINE Alu 95 312 0 2850 150 30 35 chr17 2683358 2683734 -82754746 + L1MC1 LINE L1 5413 5786 -547 2050 130 0 9 chr17 2683734 2684049 -82754431 + AluSx SINE Alu 1 312 0 2850 150 30 35 chr17 2684049 2684239 -82754241 + L1MC1 LINE L1 5786 5976 -357 1986 136 3 3 chr17 2684239 2684541 -82753939 + AluJb SINE Alu 1 302 -10 1926 128 13 13 chr17 2684552 2684856 -82753624 + AluJo SINE Alu 1 304 -8 2114 125 3 0 chr17 2685020 2685323 -82753157 + AluSx SINE Alu 1 304 -8 583 313 99 0 chr17 2685490 2685682 -82752798 + MIR SINE MIR 2 212 -50 10561 49 14 17 chr17 2686048 2687438 -82751042 - SVA Other Other 0 1386 1 216 0 0 0 chr17 2687438 2687462 -82751018 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 414 157 14 171 chr17 2687498 2687638 -82750842 - MER58B DNA MER1_type -1 340 223 288 172 0 0 chr17 2687644 2687702 -82750778 + (CA)n Simple_repeat Simple_repeat 2 59 0 2372 91 0 0 chr17 2688243 2688551 -82749929 + AluSq SINE Alu 1 308 -5 2089 130 0 9 chr17 2688562 2688877 -82749603 + AluSq SINE Alu 1 312 -1 2181 97 3 37 chr17 2689432 2689753 -82748727 + AluSq SINE Alu 4 313 0 318 182 11 11 chr17 2690057 2690148 -82748332 + Alu SINE Alu 240 301 0 2651 39 0 0 chr17 2690393 2690704 -82747776 + AluY SINE Alu 1 311 0 368 338 0 0 chr17 2690919 2691058 -82747422 + L1MEc LINE L1 35 173 -6223 2009 128 0 44 chr17 2691112 2691258 -82747222 + AluSx SINE Alu 1 152 -160 3139 38 0 3 chr17 2691258 2691630 -82746850 + L1PA5 LINE L1 5782 6152 -2 2009 128 0 44 chr17 2691630 2691804 -82746676 + AluSx SINE Alu 152 307 -5 370 378 15 5 chr17 2691806 2692010 -82746470 + L1MEc LINE L1 165 370 -6026 714 154 18 77 chr17 2692375 2692460 -82746020 + L1MB4 LINE L1 5978 6067 -113 1917 86 79 7 chr17 2692460 2692740 -82745740 + AluSx SINE Alu 1 300 -12 714 154 18 77 chr17 2692740 2692863 -82745617 + L1MB4 LINE L1 6067 6174 -6 2255 97 0 10 chr17 2693060 2693368 -82745112 - AluSx SINE Alu -7 305 1 844 258 22 45 chr17 2694903 2695048 -82743432 + MIR SINE MIR 2 140 -122 2276 110 0 0 chr17 2695048 2695357 -82743123 + AluSx SINE Alu 1 309 -3 844 258 22 45 chr17 2695357 2695478 -82743002 + MIR SINE MIR 140 262 0 419 238 98 0 chr17 2696459 2696581 -82741899 - MER91B DNA MER1_type -56 134 1 2645 199 30 47 chr17 2696989 2697011 -82741469 + L1MC4 LINE L1 6907 6928 -1114 1905 80 113 0 chr17 2697011 2697286 -82741194 + AluSx SINE Alu 1 306 -6 2645 199 30 47 chr17 2697286 2697547 -82740933 + L1MC4 LINE L1 6928 7192 -850 2104 118 0 0 chr17 2697547 2697843 -82740637 + AluSx SINE Alu 3 298 -14 2645 199 30 47 chr17 2697843 2698288 -82740192 + L1MC4 LINE L1 7192 7624 -418 1820 115 39 21 chr17 2698288 2698574 -82739906 + AluSx SINE Alu 1 291 -21 2289 95 0 22 chr17 2698579 2698714 -82739766 + AluSx SINE Alu 1 137 -175 2323 79 0 0 chr17 2698714 2699012 -82739468 + AluY SINE Alu 1 299 -8 270 81 0 0 chr17 2699012 2699049 -82739431 + (TA)n Simple_repeat Simple_repeat 2 38 0 2289 95 0 22 chr17 2699053 2699234 -82739246 + AluSx SINE Alu 137 310 -2 2078 95 0 18 chr17 2700376 2700715 -82737765 + AluSg SINE Alu 1 334 0 1155 134 70 0 chr17 2700727 2700913 -82737567 + AluSx SINE Alu 1 199 -113 3096 144 8 16 chr17 2701034 2701548 -82736932 + L1PA16 LINE L1 5651 6160 -6 2224 107 0 0 chr17 2701826 2702125 -82736355 - AluSx SINE Alu -13 299 1 504 154 5 199 chr17 2702175 2702376 -82736104 + MER20 DNA MER1_type 1 162 -57 200 204 45 0 chr17 2702680 2702724 -82735756 - L2 LINE L2 -2 3311 3266 2280 77 7 7 chr17 2703083 2703382 -82735098 + AluSx SINE Alu 1 299 -13 623 136 164 9 chr17 2703493 2703603 -82734877 - FLAM_A SINE Alu -6 136 10 2352 68 0 3 chr17 2703953 2704247 -82734233 + AluSc SINE Alu 1 293 -16 2562 61 0 0 chr17 2704256 2704567 -82733913 + AluY SINE Alu 1 311 0 978 189 0 0 chr17 2704587 2704751 -82733729 + FRAM SINE Alu 2 165 -1 2216 91 3 7 chr17 2705039 2705335 -82733145 + AluSq SINE Alu 6 300 -13 2211 85 26 0 chr17 2706359 2706664 -82731816 + AluSp SINE Alu 1 313 0 928 93 0 0 chr17 2706666 2706795 -82731685 + AluY SINE Alu 175 303 -8 2145 109 3 0 chr17 2706873 2707167 -82731313 + AluSx SINE Alu 1 295 -17 2101 116 3 3 chr17 2707507 2707809 -82730671 - AluSp SINE Alu -11 302 1 214 296 167 9 chr17 2708441 2708549 -82729931 + MIR3 SINE MIR 48 172 -36 2045 122 3 3 chr17 2708848 2709156 -82729324 + AluSx SINE Alu 1 308 0 385 363 163 7 chr17 2709214 2709514 -82728966 - L3 LINE CR1 -39 1538 1192 1979 126 20 0 chr17 2709895 2710189 -82728291 + AluSp SINE Alu 1 300 -13 202 189 0 0 chr17 2710464 2710501 -82727979 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 2123 119 0 22 chr17 2710884 2711202 -82727278 + AluSq SINE Alu 1 311 -2 530 202 0 29 chr17 2711343 2711447 -82727033 + AluJo SINE Alu 120 220 -92 2053 140 16 0 chr17 2711554 2711861 -82726619 - AluSx SINE Alu 0 312 1 192 291 0 0 chr17 2715027 2715082 -82723398 + MIR SINE MIR 92 146 -62 252 0 0 0 chr17 2715441 2715469 -82723011 + (TG)n Simple_repeat Simple_repeat 2 29 0 1214 109 0 0 chr17 2715469 2715634 -82722846 - AluSg/x SINE Alu -40 272 108 2424 62 7 10 chr17 2716169 2716478 -82722002 + AluSq SINE Alu 3 310 -3 246 32 0 0 chr17 2716478 2716509 -82721971 + (CAG)n Simple_repeat Simple_repeat 2 32 0 237 143 24 0 chr17 2716672 2716714 -82721766 - MER57A LTR ERV1 -66 337 295 658 243 106 23 chr17 2717488 2717706 -82720774 - MIR SINE MIR -19 243 8 234 0 0 0 chr17 2718619 2718645 -82719835 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 584 265 82 0 chr17 2719002 2719172 -82719308 - MIR SINE MIR -22 240 57 377 172 98 163 chr17 2719927 2719991 -82718489 - MER105 DNA DNA -1 203 136 2246 109 0 0 chr17 2719991 2720295 -82718185 - AluSg SINE Alu -6 304 1 377 172 98 163 chr17 2720295 2720445 -82718035 - MER105 DNA DNA -68 136 3 192 345 0 0 chr17 2720734 2720789 -82717691 - MIR SINE MIR -109 153 99 2304 89 0 3 chr17 2720887 2721190 -82717290 - AluSx SINE Alu -10 302 1 2223 84 3 3 chr17 2721280 2721567 -82716913 + AluSq SINE Alu 1 287 -26 22 0 0 0 chr17 2721567 2721589 -82716891 + AT_rich Low_complexity Low_complexity 1 22 0 3148 134 23 44 chr17 2721589 2721943 -82716537 - L1MB3 LINE L1 -7 6176 5837 2038 134 27 0 chr17 2721943 2722242 -82716238 - AluSg SINE Alu -3 307 1 3148 134 23 44 chr17 2722242 2722460 -82716020 - L1MB3 LINE L1 -346 5837 5616 2038 117 0 3 chr17 2722629 2722939 -82715541 + AluSx SINE Alu 1 309 0 1379 177 42 28 chr17 2723929 2724217 -82714263 - AluJo SINE Alu -20 292 1 546 275 35 18 chr17 2724324 2724495 -82713985 - MIR SINE MIR -10 252 79 2347 63 6 19 chr17 2725163 2725480 -82713000 + AluSp SINE Alu 1 313 0 204 346 122 39 chr17 2725727 2725932 -82712548 + MIR SINE MIR 7 228 -34 191 322 132 25 chr17 2726447 2726568 -82711912 - L2 LINE L2 -260 3053 2920 2411 82 0 19 chr17 2726639 2726957 -82711523 + AluSx SINE Alu 1 312 0 503 294 69 20 chr17 2727426 2727549 -82710931 + MIR SINE MIR 49 187 -75 1984 141 0 3 chr17 2727549 2727846 -82710634 + AluSx SINE Alu 1 296 -16 503 294 69 20 chr17 2727846 2727926 -82710554 + MIR SINE MIR 187 262 0 866 255 30 64 chr17 2728211 2728271 -82710209 - MLT1I LTR MaLR -15 394 334 234 0 0 0 chr17 2728271 2728297 -82710183 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2028 97 0 11 chr17 2728300 2728579 -82709901 - AluSx SINE Alu -31 281 6 866 255 30 64 chr17 2728579 2728812 -82709668 - MLT1I LTR MaLR -77 332 107 2163 103 14 0 chr17 2729388 2729680 -82708800 + AluSx SINE Alu 1 296 -16 2392 183 106 111 chr17 2729682 2729861 -82708619 - MER44D DNA MER2_type -1882 605 427 2243 111 0 0 chr17 2729861 2730159 -82708321 - AluSx SINE Alu -14 298 1 2392 183 106 111 chr17 2730159 2730255 -82708225 - MER44D DNA MER2_type -2060 427 332 2114 127 13 0 chr17 2730255 2730562 -82707918 + AluSx SINE Alu 1 311 -1 2392 183 106 111 chr17 2730562 2731022 -82707458 - MER44D DNA MER2_type -2155 332 1 2126 103 21 0 chr17 2731218 2731509 -82706971 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 2731646 2731674 -82706806 + (GA)n Simple_repeat Simple_repeat 1 28 0 2338 89 0 0 chr17 2733610 2733913 -82704567 + AluSq SINE Alu 1 303 -10 1955 138 20 13 chr17 2734122 2734427 -82704053 - AluSx SINE Alu -5 307 1 2081 128 3 0 chr17 2734468 2734766 -82703714 + AluSx SINE Alu 1 299 -13 416 302 16 1 chr17 2734874 2735007 -82703473 - MER5B DNA MER1_type -40 149 1 253 316 158 38 chr17 2735033 2735075 -82703405 - MER5A DNA MER1_type -1 188 152 2383 74 0 0 chr17 2735075 2735372 -82703108 - AluSg SINE Alu -13 297 1 253 316 158 38 chr17 2735372 2735487 -82702993 - MER5A DNA MER1_type -37 152 12 566 236 52 40 chr17 2735507 2735681 -82702799 + MER5B DNA MER1_type 1 176 -2 1944 96 0 0 chr17 2735742 2735991 -82702489 - AluSx SINE Alu -63 249 1 848 158 0 15 chr17 2736048 2736181 -82702299 - FLAM_A SINE Alu -2 131 1 243 310 100 0 chr17 2736437 2736537 -82701943 - MIR SINE MIR -73 135 26 2267 70 0 3 chr17 2736565 2736877 -82701603 + AluY SINE Alu 1 311 0 2433 83 0 0 chr17 2736888 2737200 -82701280 + AluSx SINE Alu 1 312 0 2285 97 0 0 chr17 2738174 2738473 -82700007 - AluSg1 SINE Alu -10 299 1 1511 196 72 19 chr17 2738473 2738954 -82699526 + MLT1F LTR MaLR 35 542 0 2116 117 3 3 chr17 2739049 2739358 -82699122 - AluSg SINE Alu -1 309 1 1096 82 0 0 chr17 2739358 2739493 -82698987 - AluSq/x SINE Alu -178 135 1 358 223 71 9 chr17 2739644 2739756 -82698724 + MER57-int LTR ERV1 127 245 -7292 516 86 26 192 chr17 2740145 2740296 -82698184 + MER57-int LTR ERV1 1177 1302 -3569 367 228 70 70 chr17 2740296 2740423 -82698057 + MER93b LTR ERV1 199 328 -45 2198 109 0 3 chr17 2740423 2740726 -82697754 - AluSg1 SINE Alu -7 302 1 367 228 70 70 chr17 2740726 2740756 -82697724 + MER93b LTR ERV1 327 356 -17 1230 156 7 48 chr17 2740786 2740821 -82697659 - L1M4 LINE L1 -391 5793 5758 2338 82 0 3 chr17 2740821 2741115 -82697365 + AluSc SINE Alu 1 293 -16 1230 156 7 48 chr17 2741115 2741348 -82697132 - L1M4 LINE L1 -426 5758 5536 2168 101 0 3 chr17 2741776 2742072 -82696408 + AluSc SINE Alu 1 295 -14 1179 181 23 30 chr17 2742254 2742520 -82695960 + MER58B DNA MER1_type 78 341 0 2338 73 0 20 chr17 2742586 2742889 -82695591 - AluY SINE Alu -14 297 1 2331 68 3 0 chr17 2742890 2743182 -82695298 - AluSg1 SINE Alu -16 293 1 773 163 6 17 chr17 2743796 2743968 -82694512 + CT-rich Low_complexity Low_complexity 2 171 0 2302 106 0 0 chr17 2743968 2744280 -82694200 - AluSx SINE Alu 0 312 1 1109 159 17 0 chr17 2744282 2744458 -82694022 - AluJb SINE Alu -16 296 118 2446 70 0 3 chr17 2745024 2745336 -82693144 - AluSx SINE Alu -1 311 1 221 270 0 40 chr17 2746122 2746196 -82692284 + MIR SINE MIR 85 155 -107 256 315 9 28 chr17 2746690 2746798 -82691682 + MIR SINE MIR 31 136 -126 1953 133 0 3 chr17 2746971 2747286 -82691194 - AluSx SINE Alu 0 314 1 2193 245 45 13 chr17 2747556 2748094 -82690386 + MLT1H1 LTR MaLR 1 555 0 2287 98 0 0 chr17 2748102 2748408 -82690072 + AluSx SINE Alu 1 306 -6 541 298 55 36 chr17 2748411 2748740 -82689740 - HAL1 LINE L1 -963 1544 1210 2208 82 0 23 chr17 2748768 2749071 -82689409 + AluY SINE Alu 4 299 -12 1084 140 0 28 chr17 2749071 2749249 -82689231 + AluSq SINE Alu 135 307 -6 509 283 69 24 chr17 2749251 2749579 -82688901 - L1M4 LINE L1 -656 5522 5182 263 206 27 0 chr17 2750564 2750637 -82687843 + L1MC5 LINE L1 7832 7906 -55 2385 84 0 0 chr17 2750652 2750950 -82687530 - AluSg SINE Alu -12 298 1 1830 166 0 13 chr17 2750974 2751282 -82687198 - AluJo SINE Alu -8 304 1 227 324 152 0 chr17 2751294 2751399 -82687081 - L3 LINE CR1 -118 1459 1339 465 332 76 5 chr17 2751433 2751644 -82686836 + MIR SINE MIR 18 243 -19 2311 93 10 0 chr17 2751778 2752079 -82686401 + AluSq SINE Alu 1 304 -9 2169 85 0 20 chr17 2752905 2753200 -82685280 + AluSx SINE Alu 1 289 -23 850 189 148 71 chr17 2753722 2753845 -82684635 + MER33 DNA MER1_type 4 116 -2469 2306 103 3 0 chr17 2753845 2754156 -82684324 - AluSx SINE Alu 0 312 1 850 189 148 71 chr17 2754156 2754299 -82684181 + MER33 DNA MER1_type 116 298 -2287 2246 79 7 0 chr17 2754299 2754589 -82683891 - AluSc SINE Alu -17 292 1 850 189 148 71 chr17 2754589 2754618 -82683862 + MER33 DNA MER1_type 298 323 -1 504 204 11 0 chr17 2754636 2754729 -82683751 + AluJ/FLAM SINE Alu 1 94 -218 258 195 0 91 chr17 2755060 2755137 -82683343 - MIR3 SINE MIR -38 170 101 2394 78 0 7 chr17 2755306 2755614 -82682866 - AluSx SINE Alu -6 306 1 1112 182 47 23 chr17 2755632 2755846 -82682634 + MER20 DNA MER1_type 1 219 0 5228 21 0 0 chr17 2756040 2756614 -82681866 + SVA Other Other 809 1382 -4 2196 111 0 7 chr17 2756622 2756929 -82681551 + AluSx SINE Alu 2 306 -6 2011 116 0 0 chr17 2757222 2757497 -82680983 + AluSx SINE Alu 1 275 -37 739 47 0 19 chr17 2757508 2757614 -82680866 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2307 33 0 0 chr17 2757614 2757887 -82680593 - AluY SINE Alu -38 273 1 299 171 198 36 chr17 2759702 2759813 -82678667 - MER106A DNA MER1_type -56 180 52 2369 60 0 10 chr17 2759817 2760118 -82678362 - AluSx SINE Alu -14 298 1 2262 104 0 0 chr17 2760578 2760876 -82677604 - AluSq SINE Alu -15 298 1 2211 102 0 0 chr17 2761727 2762021 -82676459 + AluSx SINE Alu 4 297 -15 22 56 0 0 chr17 2762021 2762057 -82676423 + AT_rich Low_complexity Low_complexity 1 36 0 1767 164 0 23 chr17 2762961 2763265 -82675215 + AluJo SINE Alu 6 302 -10 243 324 29 19 chr17 2763502 2763607 -82674873 + MARNA DNA Mariner 62 167 -419 2287 100 0 3 chr17 2763713 2764023 -82674457 - AluSg SINE Alu -1 309 1 630 174 0 0 chr17 2764374 2764512 -82673968 + (TG)n Simple_repeat Simple_repeat 1 138 0 307 283 19 9 chr17 2764580 2764686 -82673794 - MIR SINE MIR -43 165 59 2243 98 3 3 chr17 2764752 2765057 -82673423 + AluSx SINE Alu 1 305 -7 497 264 71 13 chr17 2765224 2765379 -82673101 + MIR SINE MIR 2 165 -97 2317 81 0 0 chr17 2765379 2765675 -82672805 + AluY SINE Alu 1 296 -15 1172 170 0 77 chr17 2765793 2765921 -82672559 + AluJb SINE Alu 1 101 -211 2070 104 14 7 chr17 2765921 2766209 -82672271 - AluSx SINE Alu -22 290 1 1172 170 0 77 chr17 2766209 2766339 -82672141 + AluJb SINE Alu 101 239 -73 714 258 57 0 chr17 2766480 2766674 -82671806 - MIR SINE MIR 0 262 58 2289 103 0 0 chr17 2766795 2767106 -82671374 - AluY SINE Alu 0 311 1 917 135 0 0 chr17 2767110 2767243 -82671237 - AluSq/x SINE Alu -180 133 1 2228 119 0 0 chr17 2767920 2768222 -82670258 + AluSx SINE Alu 1 302 -10 2099 115 10 7 chr17 2768625 2768929 -82669551 - AluSc SINE Alu -4 305 1 790 176 0 47 chr17 2768931 2769079 -82669401 - FLAM_C SINE Alu -2 141 1 2131 109 0 10 chr17 2771512 2771814 -82666666 + AluSx SINE Alu 3 301 -11 263 284 226 0 chr17 2771878 2771980 -82666500 + MER5A DNA MER1_type 59 183 -6 912 131 25 175 chr17 2772201 2772321 -82666159 + L1MA9 LINE L1 6036 6125 -187 229 175 0 0 chr17 2772321 2772361 -82666119 + Alu SINE Alu 135 174 -134 912 131 25 175 chr17 2772361 2772521 -82665959 + L1MA9 LINE L1 6125 6307 -5 971 211 11 0 chr17 2772665 2772850 -82665630 + AluJo SINE Alu 121 307 -5 2221 110 3 0 chr17 2773136 2773445 -82665035 - AluSx SINE Alu -2 310 1 2065 107 14 0 chr17 2773454 2773734 -82664746 - AluSx SINE Alu -28 284 1 399 287 100 10 chr17 2773781 2774017 -82664463 + L1ME3A LINE L1 5907 6162 0 2377 87 0 6 chr17 2774033 2774345 -82664135 + AluSx SINE Alu 1 310 -2 371 301 32 75 chr17 2774526 2774657 -82663823 + MIR SINE MIR 84 206 -56 2147 125 0 0 chr17 2774657 2774953 -82663527 + AluSq SINE Alu 1 296 -17 371 301 32 75 chr17 2774953 2775007 -82663473 + MIR SINE MIR 206 261 -1 847 82 16 16 chr17 2775343 2775465 -82663015 + FRAM SINE Alu 18 139 -37 2066 105 3 3 chr17 2775477 2775763 -82662717 + AluSx SINE Alu 1 286 -26 2231 108 0 0 chr17 2775943 2776239 -82662241 + AluSp SINE Alu 3 298 -15 476 286 71 18 chr17 2776495 2776663 -82661817 - MIR SINE MIR -23 239 63 2306 87 0 22 chr17 2776740 2777052 -82661428 + AluSx SINE Alu 1 305 -7 791 105 0 0 chr17 2777062 2777167 -82661313 + FLAM_C SINE Alu 1 105 -38 364 267 25 25 chr17 2778430 2778591 -82659889 + C-rich Low_complexity Low_complexity 5 165 0 310 298 17 44 chr17 2778613 2778794 -82659686 + C-rich Low_complexity Low_complexity 5 180 0 220 271 17 0 chr17 2779427 2779486 -82658994 + GA-rich Low_complexity Low_complexity 4 63 0 308 296 65 0 chr17 2781695 2781803 -82656677 - MIR SINE MIR -113 149 35 2264 101 0 0 chr17 2784380 2784677 -82653803 + AluSq SINE Alu 1 297 -16 240 35 0 0 chr17 2788095 2788124 -82650356 + (A)n Simple_repeat Simple_repeat 1 29 0 2371 67 10 0 chr17 2789416 2789716 -82648764 + AluSx SINE Alu 1 303 -9 653 257 48 62 chr17 2792207 2792239 -82646241 - MIR SINE MIR 0 262 231 2242 97 0 19 chr17 2792239 2792549 -82645931 + AluSx SINE Alu 1 304 -8 653 257 48 62 chr17 2792549 2792745 -82645735 - MIR SINE MIR -31 231 38 2116 99 7 20 chr17 2792938 2793240 -82645240 + AluSx SINE Alu 1 298 -14 2370 73 3 0 chr17 2793353 2793653 -82644827 + AluSp SINE Alu 1 301 -12 1525 157 52 28 chr17 2793704 2793990 -82644490 + AluJb SINE Alu 3 295 -17 278 343 72 12 chr17 2794128 2794294 -82644186 - L2 LINE L2 -214 3058 2883 507 155 10 62 chr17 2794331 2794428 -82644052 + FRAM SINE Alu 4 95 -81 282 247 62 0 chr17 2794888 2794969 -82643511 - L1ME LINE L1 -343 5778 5693 2170 110 0 25 chr17 2795253 2795571 -82642909 + AluSg SINE Alu 1 310 0 255 313 115 0 chr17 2796230 2796326 -82642154 - MIR3 SINE MIR -11 197 91 2313 50 9 40 chr17 2796381 2796702 -82641778 + AluY SINE Alu 1 311 0 708 335 80 15 chr17 2797042 2797379 -82641101 + L2 LINE L2 2914 3272 0 2172 95 3 3 chr17 2797398 2797694 -82640786 - AluSx SINE Alu -16 296 1 2243 88 7 3 chr17 2797909 2798205 -82640275 - AluSg SINE Alu -13 297 1 257 272 237 18 chr17 2798987 2799101 -82639379 - MER5A DNA MER1_type 0 189 51 2247 102 0 0 chr17 2799134 2799437 -82639043 + AluSx SINE Alu 1 303 -9 759 266 58 0 chr17 2801485 2801673 -82636807 + MIR SINE MIR 43 241 -21 251 318 24 56 chr17 2803902 2804028 -82634452 - MIR3 SINE MIR 0 208 87 367 288 52 38 chr17 2804390 2804584 -82633896 - MIR SINE MIR -51 211 18 244 338 176 7 chr17 2804611 2804747 -82633733 - L2 LINE L2 -2 3270 3112 2372 89 0 3 chr17 2805112 2805425 -82633055 + AluSq SINE Alu 2 313 0 2359 76 10 0 chr17 2805819 2806122 -82632358 + AluSx SINE Alu 1 306 -6 405 176 14 0 chr17 2806616 2806690 -82631790 + MER20 DNA MER1_type 73 147 -72 1822 147 7 3 chr17 2806690 2806976 -82631504 + AluJo SINE Alu 1 287 -25 2239 98 3 3 chr17 2807195 2807501 -82630979 - AluSp SINE Alu -7 306 1 657 209 0 0 chr17 2810750 2810903 -82627577 + (CA)n Simple_repeat Simple_repeat 1 153 0 1946 71 61 46 chr17 2812958 2813261 -82625219 + AluY SINE Alu 1 307 0 190 259 306 0 chr17 2813316 2813401 -82625079 + MIR SINE MIR 69 179 -83 394 130 0 0 chr17 2813402 2813471 -82625009 + L1MC4 LINE L1 7475 7543 -499 1722 162 47 0 chr17 2813478 2813775 -82624705 + AluJb SINE Alu 1 311 -1 1704 179 12 66 chr17 2813794 2814373 -82624107 + L1MB5 LINE L1 5099 5659 -525 2113 113 0 19 chr17 2814373 2814692 -82623788 + AluSq SINE Alu 1 313 0 1704 179 12 66 chr17 2814692 2814743 -82623737 + L1MB5 LINE L1 5659 5711 -473 285 109 31 47 chr17 2814744 2814808 -82623672 - AluSq SINE Alu -1 301 239 1153 144 0 28 chr17 2814808 2814988 -82623492 - AluSq SINE Alu -137 176 2 1076 186 4 30 chr17 2814991 2815227 -82623253 + L1MB5 LINE L1 5730 5959 -215 1480 81 5 10 chr17 2815227 2815425 -82623055 - AluSx SINE Alu -115 197 1 557 196 22 22 chr17 2815480 2815618 -82622862 + MLT1B LTR MaLR 205 342 -48 22 35 0 0 chr17 2817068 2817097 -82621383 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 2817180 2817209 -82621271 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2238 60 50 10 chr17 2817359 2817659 -82620821 - AluSx SINE Alu 0 312 1 329 330 54 0 chr17 2818513 2818625 -82619855 - MER5A DNA MER1_type -9 180 63 471 337 125 24 chr17 2818651 2818948 -82619532 + L2 LINE L2 2986 3312 -1 1290 179 0 48 chr17 2819843 2819968 -82618512 + AluJo SINE Alu 1 130 -182 480 18 0 0 chr17 2819968 2820025 -82618455 + (CA)n Simple_repeat Simple_repeat 2 58 0 1290 179 0 48 chr17 2820025 2820043 -82618437 + AluJo SINE Alu 130 147 -165 1816 139 17 10 chr17 2820043 2820331 -82618149 + AluJo SINE Alu 1 290 -22 1290 179 0 48 chr17 2820331 2820437 -82618043 + AluJo SINE Alu 147 239 -73 2036 119 0 0 chr17 2820455 2820879 -82617601 + AluSg SINE Alu 2 425 0 261 263 105 26 chr17 2820885 2820999 -82617481 - MER112 DNA MER1_type -136 124 2 2270 91 0 0 chr17 2821150 2821446 -82617034 + AluSg SINE Alu 1 296 -14 1535 181 24 0 chr17 2821518 2821811 -82616669 + MSTB LTR MaLR 1 300 -126 1329 101 105 5 chr17 2822035 2822244 -82616236 - MER30 DNA MER1_type 0 230 1 2276 96 3 6 chr17 2822309 2822621 -82615859 + AluSp SINE Alu 3 313 0 1892 96 0 76 chr17 2822650 2822951 -82615529 - AluSx SINE Alu -4 308 31 4392 89 189 23 chr17 2822951 2823659 -82614821 + LTR12 LTR ERV1 1 826 0 1558 165 9 71 chr17 2824084 2824406 -82614074 + AluJo SINE Alu 1 302 -10 2398 76 0 13 chr17 2824680 2824997 -82613483 + AluSp SINE Alu 1 313 0 2197 109 3 3 chr17 2825590 2825894 -82612586 + AluSp SINE Alu 1 304 -9 1708 168 0 26 chr17 2826666 2826826 -82611654 - AluJb SINE Alu -17 295 145 2140 110 3 3 chr17 2826826 2827118 -82611362 - AluSc SINE Alu -17 292 1 1708 168 0 26 chr17 2827118 2827260 -82611220 - AluJb SINE Alu -167 145 1 1800 85 0 0 chr17 2827536 2827771 -82610709 - AluSc SINE Alu -70 239 5 651 236 109 0 chr17 2827771 2828000 -82610480 + Charlie4a DNA MER1_type 159 412 -96 2534 56 0 0 chr17 2828642 2828944 -82609536 + AluY SINE Alu 1 302 -9 2007 100 0 0 chr17 2829810 2830081 -82608399 - AluSx SINE Alu -8 304 34 553 175 133 33 chr17 2830365 2830485 -82607995 + FLAM_A SINE Alu 1 132 -1 2079 85 14 11 chr17 2830492 2830810 -82607670 + AluSg SINE Alu 1 319 0 2097 123 0 0 chr17 2831007 2831300 -82607180 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr17 2831300 2831322 -82607158 + AT_rich Low_complexity Low_complexity 1 22 0 2064 137 7 0 chr17 2831508 2831814 -82606666 + AluSx SINE Alu 1 308 -4 1093 104 0 31 chr17 2832230 2832252 -82606228 - AluSg/x SINE Alu -8 304 283 2287 83 6 6 chr17 2832252 2832564 -82605916 - AluSx SINE Alu 0 312 1 201 39 0 0 chr17 2832567 2832593 -82605887 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1093 104 0 31 chr17 2832593 2832729 -82605751 - AluSg/x SINE Alu -31 281 147 768 333 91 52 chr17 2833412 2833537 -82604943 + L1M4 LINE L1 4156 4275 -1871 2191 71 14 10 chr17 2833537 2833831 -82604649 + AluSx SINE Alu 1 295 -17 768 333 91 52 chr17 2833831 2833958 -82604522 + L1M4 LINE L1 4275 4396 -1750 1572 171 34 13 chr17 2833958 2834256 -82604224 + AluJo SINE Alu 1 304 -8 768 333 91 52 chr17 2834256 2834346 -82604134 + L1M4 LINE L1 4396 4481 -1665 2308 103 3 0 chr17 2834346 2834657 -82603823 + AluSp SINE Alu 2 313 0 768 333 91 52 chr17 2834657 2834815 -82603665 + L1M4 LINE L1 4481 4631 -1515 2331 72 0 0 chr17 2834815 2835106 -82603374 - AluY SINE Alu -20 291 1 2402 77 0 0 chr17 2835108 2835405 -82603075 - AluSc SINE Alu -12 297 1 768 333 91 52 chr17 2835405 2835480 -82603000 + L1M4 LINE L1 4631 4760 -1386 1397 178 15 41 chr17 2836464 2836754 -82601726 + AluJo SINE Alu 15 278 -34 2111 85 0 51 chr17 2836754 2837070 -82601410 + AluSg SINE Alu 1 300 -10 268 320 13 0 chr17 2838518 2838593 -82599887 + L3 LINE CR1 1481 1556 -21 474 310 58 65 chr17 2839025 2839286 -82599194 + MLT1L LTR MaLR 136 394 -221 2134 117 0 13 chr17 2839824 2840140 -82598340 + AluSx SINE Alu 1 312 0 1949 116 7 3 chr17 2840590 2840901 -82597579 - AluSx SINE Alu 0 312 1 2204 103 0 3 chr17 2841455 2841756 -82596724 - AluSx SINE Alu -12 300 1 1972 145 0 0 chr17 2841812 2842102 -82596378 - AluJb SINE Alu -22 290 1 2005 135 0 19 chr17 2842134 2842445 -82596035 - AluJo SINE Alu -3 309 5 225 265 0 0 chr17 2842585 2842634 -82595846 - L2 LINE L2 -243 3070 3022 1015 106 0 0 chr17 2842635 2842767 -82595713 + AluSq/x SINE Alu 1 132 -181 2128 62 47 0 chr17 2842769 2843065 -82595415 + AluSp SINE Alu 1 309 0 2436 65 3 0 chr17 2843071 2843379 -82595101 + AluSx SINE Alu 1 309 -3 993 298 51 72 chr17 2843397 2844149 -82594331 - L2 LINE L2 -312 3001 2266 853 102 0 8 chr17 2847418 2847536 -82590944 + FLAM_A SINE Alu 1 117 -16 2127 90 0 29 chr17 2847590 2847901 -82590579 - AluSg SINE Alu -8 302 1 2451 65 0 0 chr17 2848262 2848570 -82589910 - AluY SINE Alu -3 308 1 861 226 6 0 chr17 2849076 2849235 -82589245 - AluJb SINE Alu -13 299 140 2325 94 3 0 chr17 2849240 2849548 -82588932 - AluSx SINE Alu -3 309 1 2172 98 0 25 chr17 2849625 2849941 -82588539 + AluSx SINE Alu 1 308 -4 2053 96 0 0 chr17 2850499 2850770 -82587710 - AluSx SINE Alu -41 271 1 1437 109 28 0 chr17 2850771 2850982 -82587498 - L1PA10 LINE L1 -13 6155 5939 2162 75 4 0 chr17 2851049 2851380 -82587100 + AluSg1 SINE Alu 1 332 0 871 187 79 30 chr17 2851455 2851658 -82586822 - MER20 DNA MER1_type -1 218 6 2490 77 0 0 chr17 2852238 2852548 -82585932 - AluSx SINE Alu -2 310 1 2188 108 0 10 chr17 2852697 2853003 -82585477 + AluSx SINE Alu 1 303 -9 257 304 104 112 chr17 2853446 2853706 -82584774 - L2 LINE L2 -8 3264 3007 572 187 18 160 chr17 2853770 2853879 -82584601 - MER105 DNA DNA -13 191 68 2236 103 3 3 chr17 2853879 2854191 -82584289 - AluSq SINE Alu -1 312 1 572 187 18 160 chr17 2854191 2854222 -82584258 - MER105 DNA DNA -136 68 34 2112 193 159 48 chr17 2854222 2854321 -82584159 - LTR65 LTR ERV1 0 669 582 2160 86 4 0 chr17 2854321 2854623 -82583857 - AluSx SINE Alu 0 307 5 2112 193 159 48 chr17 2854623 2854972 -82583508 - LTR65 LTR ERV1 -87 582 134 2410 59 0 10 chr17 2854972 2855279 -82583201 - AluY SINE Alu -7 304 1 2112 193 159 48 chr17 2855279 2855430 -82583050 - LTR65 LTR ERV1 -535 134 1 572 187 18 160 chr17 2855430 2855507 -82582973 - MER105 DNA DNA -170 34 4 1492 123 11 84 chr17 2855929 2856069 -82582411 - AluJb SINE Alu -49 263 153 2360 76 3 0 chr17 2856069 2856373 -82582107 - AluSp SINE Alu -8 305 1 1492 123 11 84 chr17 2856373 2856516 -82581964 - AluJb SINE Alu -159 153 1 460 248 142 0 chr17 2856648 2856789 -82581691 - MIR SINE MIR -1 261 101 2021 101 4 0 chr17 2856789 2857067 -82581413 + AluSx SINE Alu 22 300 -12 1046 127 7 0 chr17 2857067 2857240 -82581240 + AluSq SINE Alu 134 307 0 270 333 51 0 chr17 2857581 2857698 -82580782 + L3 LINE CR1 1308 1430 -147 392 21 0 0 chr17 2857699 2857747 -82580733 - AluY SINE Alu -254 48 1 206 305 107 98 chr17 2857809 2857918 -82580562 - L2 LINE L2 -636 2678 2572 2176 117 3 0 chr17 2857918 2858227 -82580253 + AluSx SINE Alu 1 310 -2 206 305 107 98 chr17 2858227 2858537 -82579943 - L2 LINE L2 -742 2572 2255 2096 84 0 0 chr17 2859100 2859375 -82579105 - AluSg SINE Alu -35 275 1 843 246 72 0 chr17 2859448 2859643 -82578837 + MER3 DNA MER1_type 1 209 0 664 277 179 14 chr17 2859798 2860338 -82578142 + L2 LINE L2 2667 3313 0 2159 117 3 0 chr17 2861273 2861582 -82576898 - AluSx SINE Alu -2 310 1 2495 29 3 32 chr17 2861977 2862292 -82576188 - AluY SINE Alu -5 306 1 2251 148 41 35 chr17 2862595 2862700 -82575780 + L1MC4 LINE L1 7378 7481 -561 2239 97 3 0 chr17 2862700 2862998 -82575482 + AluSq SINE Alu 1 299 -14 2251 148 41 35 chr17 2862998 2863353 -82575127 + L1MC4 LINE L1 7481 7841 -201 1236 121 0 0 chr17 2863361 2863534 -82574946 - AluSg/x SINE Alu -14 298 126 2092 109 0 34 chr17 2863534 2863856 -82574624 - AluSx SINE Alu -1 311 1 193 264 58 58 chr17 2864230 2864317 -82574163 + MIR3 SINE MIR 107 193 -15 2492 74 0 0 chr17 2864596 2864907 -82573573 - AluSx SINE Alu -1 311 1 803 222 0 30 chr17 2864909 2865076 -82573404 - FRAM SINE Alu 0 166 5 2182 103 6 13 chr17 2865342 2865653 -82572827 - AluSx SINE Alu -3 309 1 2192 102 0 0 chr17 2866243 2866546 -82571934 - AluSq SINE Alu -10 303 1 210 330 52 0 chr17 2867188 2867303 -82571177 - MIR3 SINE MIR -7 201 81 2262 83 6 10 chr17 2867350 2867662 -82570818 - AluY SINE Alu 0 311 1 1143 38 0 0 chr17 2867664 2867795 -82570685 - AluY SINE Alu -180 131 1 2218 70 27 10 chr17 2868214 2868513 -82569967 - AluY SINE Alu -7 304 1 978 267 180 46 chr17 2869026 2869209 -82569271 - L2 LINE L2 -1 3312 3155 2119 94 3 3 chr17 2869209 2869508 -82568972 + AluSx SINE Alu 1 299 -13 978 267 180 46 chr17 2869508 2870157 -82568323 - L2 LINE L2 -158 3155 2311 2409 50 7 0 chr17 2870157 2870455 -82568025 - AluY SINE Alu -10 301 2 978 267 180 46 chr17 2870455 2870614 -82567866 - L2 LINE L2 -1002 2311 2175 2214 112 0 0 chr17 2870640 2870944 -82567536 + AluSg SINE Alu 1 304 -6 543 307 146 0 chr17 2870963 2871155 -82567325 - MIR SINE MIR -35 227 8 192 284 69 35 chr17 2871514 2871630 -82566850 - L2 LINE L2 -210 3062 2943 389 278 26 57 chr17 2873148 2873327 -82565153 + MIR SINE MIR 14 192 -61 2062 126 17 0 chr17 2873378 2873672 -82564808 + AluSx SINE Alu 1 299 -13 2137 111 7 0 chr17 2873673 2873979 -82564501 + AluSp SINE Alu 2 309 -4 195 231 102 37 chr17 2874560 2874668 -82563812 + MIR3 SINE MIR 40 154 -54 1743 117 53 0 chr17 2875169 2875457 -82563023 - AluSx SINE Alu 0 307 6 303 187 0 133 chr17 2875754 2875957 -82562523 + C-rich Low_complexity Low_complexity 4 179 0 565 113 0 0 chr17 2876507 2876587 -82561893 + AluSg/x SINE Alu 217 296 -14 264 211 253 0 chr17 2876919 2877014 -82561466 + MIR SINE MIR 21 139 -69 223 359 18 41 chr17 2877074 2877129 -82561351 - MIR3 SINE MIR -2 206 151 1749 152 13 32 chr17 2877129 2877306 -82561174 - AluSx SINE Alu -2 310 140 2099 118 0 10 chr17 2877306 2877610 -82560870 - AluSx SINE Alu -11 301 1 1749 152 13 32 chr17 2877610 2877748 -82560732 - AluSx SINE Alu -172 140 1 223 359 18 41 chr17 2877748 2877862 -82560618 - MIR3 SINE MIR -57 151 41 307 226 65 123 chr17 2878076 2878385 -82560095 + L2 LINE L2 2747 3052 -220 201 258 72 41 chr17 2878881 2878978 -82559502 - MIR SINE MIR -87 121 22 556 232 14 162 chr17 2879043 2879149 -82559331 - MIR SINE MIR 0 262 142 1105 148 0 0 chr17 2879149 2879311 -82559169 - FRAM SINE Alu 0 166 5 556 232 14 162 chr17 2879311 2879343 -82559137 - MIR SINE MIR -120 142 107 2115 112 3 16 chr17 2879343 2879657 -82558823 - AluSx SINE Alu -2 310 1 556 232 14 162 chr17 2879657 2879749 -82558731 - MIR SINE MIR -155 107 78 2452 62 3 0 chr17 2879749 2880053 -82558427 + AluY SINE Alu 1 305 -6 556 232 14 162 chr17 2880053 2880104 -82558376 - MIR SINE MIR -184 78 21 567 254 125 19 chr17 2880693 2881048 -82557432 + MLT1H1 LTR MaLR 86 547 -8 2171 117 3 3 chr17 2881335 2881644 -82556836 - AluSx SINE Alu -3 309 1 266 208 20 89 chr17 2881707 2881808 -82556672 + MIR3 SINE MIR 81 174 -34 336 111 0 0 chr17 2881922 2881976 -82556504 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2387 68 3 10 chr17 2883494 2883802 -82554678 - AluY SINE Alu -4 307 2 1993 134 7 0 chr17 2883806 2884097 -82554383 - AluSx SINE Alu -19 293 1 288 0 0 0 chr17 2884211 2884243 -82554237 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 236 310 0 0 chr17 2884249 2884307 -82554173 - L2 LINE L2 -19 3294 3237 2147 92 0 0 chr17 2885319 2885622 -82552858 + AluSx SINE Alu 1 303 0 195 281 24 85 chr17 2885753 2885835 -82552645 + L3 LINE CR1 1377 1453 -124 2557 43 0 0 chr17 2885972 2886275 -82552205 + AluY SINE Alu 1 303 -8 482 288 179 11 chr17 2886455 2886823 -82551657 + L2 LINE L2 1818 2247 -1067 1256 119 0 21 chr17 2886825 2887019 -82551461 + MLT1D LTR MaLR 1 190 -315 1195 45 0 0 chr17 2887028 2887182 -82551298 + GSAT Satellite centromeric 32 185 -32 385 150 0 0 chr17 2887177 2887237 -82551243 + MLT1D LTR MaLR 154 213 -292 * 1240 130 0 0 chr17 3087244 3087429 -82351051 - AluSq SINE Alu -128 185 1 354 293 8 0 chr17 3087467 3087600 -82350880 - L1M4 LINE L1 -3594 2552 2419 2185 94 3 10 chr17 3087963 3088271 -82350209 + AluSx SINE Alu 1 306 -6 1804 111 36 33 chr17 3088751 3089057 -82349423 + AluSx SINE Alu 5 311 -1 1684 155 0 20 chr17 3089407 3089704 -82348776 + AluJb SINE Alu 13 303 -9 765 81 0 10 chr17 3089706 3089805 -82348675 + AluSp SINE Alu 38 135 -178 2142 65 0 77 chr17 3089805 3089942 -82348538 + AluSp SINE Alu 1 147 -166 2209 79 26 3 chr17 3089942 3090245 -82348235 + AluY SINE Alu 1 310 -1 2142 65 0 77 chr17 3090245 3090431 -82348049 + AluSp SINE Alu 147 299 -14 234 322 44 22 chr17 3090494 3090584 -82347896 + L1MC/D LINE L1 5498 5589 -2219 442 246 34 114 chr17 3090599 3090778 -82347702 - L1MC5 LINE L1 -37 7924 7767 1984 116 0 28 chr17 3090778 3091097 -82347383 + AluSx SINE Alu 2 311 -1 442 246 34 114 chr17 3091097 3091153 -82347327 - L1MC5 LINE L1 -194 7767 7708 906 219 45 20 chr17 3091170 3091416 -82347064 - L1ME2 LINE L1 -10 6154 5903 561 346 29 8 chr17 3091426 3091669 -82346811 - L1MEc LINE L1 -6098 298 51 381 193 67 44 chr17 3091672 3091807 -82346673 + L1MC4 LINE L1 6972 7109 -933 1931 117 0 47 chr17 3091839 3092156 -82346324 - AluSx SINE Alu -10 302 1 710 213 36 38 chr17 3092163 3092394 -82346086 - L1ME2 LINE L1 -310 5854 5648 190 265 41 0 chr17 3092405 3092454 -82346026 - L2 LINE L2 -74 3198 3148 181 237 0 0 chr17 3092692 3092730 -82345750 + MIR SINE MIR 117 154 -108 2440 40 0 7 chr17 3093198 3093502 -82344978 + AluY SINE Alu 1 302 -9 269 129 71 14 chr17 3093528 3093598 -82344882 - L1ME4a LINE L1 -1 6120 6047 1432 151 12 15 chr17 3093601 3093860 -82344620 + AluJb SINE Alu 1 258 -54 439 282 59 86 chr17 3093898 3094104 -82344376 + MIR SINE MIR 9 208 -54 2461 63 0 0 chr17 3094104 3094406 -82344074 + AluSx SINE Alu 2 303 -9 439 282 59 86 chr17 3094406 3094454 -82344026 + MIR SINE MIR 208 256 -6 411 309 117 19 chr17 3094464 3094692 -82343788 + L1ME LINE L1 5440 5719 -443 2078 98 0 35 chr17 3094692 3095008 -82343472 + AluSx SINE Alu 2 306 -6 411 309 117 19 chr17 3095008 3095112 -82343368 + L1ME LINE L1 5719 5811 -351 1473 163 6 68 chr17 3095228 3095553 -82342927 + AluJb SINE Alu 5 309 -3 2145 103 0 25 chr17 3095685 3096005 -82342475 - AluSx SINE Alu 0 312 1 3597 206 32 43 chr17 3096537 3096998 -82341482 + MER21B LTR ERV1 13 463 -400 2072 92 24 3 chr17 3096998 3097290 -82341190 - AluSg SINE Alu -12 298 1 3597 206 32 43 chr17 3097290 3097639 -82340841 + MER21B LTR ERV1 463 814 -49 2254 81 7 0 chr17 3097737 3098032 -82340448 + AluSx SINE Alu 2 298 -14 261 0 0 0 chr17 3098072 3098101 -82340379 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 313 298 98 74 chr17 3098106 3098485 -82339995 - L2 LINE L2 -36 3236 2849 2313 77 13 10 chr17 3098663 3098973 -82339507 + AluSq SINE Alu 1 311 -2 839 256 98 94 chr17 3098973 3099492 -82338988 - L1ME3A LINE L1 -41 6129 5609 2221 102 0 31 chr17 3100070 3100392 -82338088 + AluSx SINE Alu 1 312 0 2064 114 0 29 chr17 3100507 3100822 -82337658 + AluSx SINE Alu 1 306 -6 243 260 50 70 chr17 3101023 3101123 -82337357 - MER91C DNA MER1_type -39 101 4 543 303 162 6 chr17 3101611 3101925 -82336555 - L2 LINE L2 -6 3307 2945 1702 154 0 8 chr17 3102107 3102373 -82336107 + AluJb SINE Alu 29 292 -20 775 176 155 10 chr17 3102441 3102624 -82335856 - MLT1D LTR MaLR -69 436 245 1261 183 48 8 chr17 3102627 3102878 -82335602 + AluJb SINE Alu 35 295 -17 1041 96 0 0 chr17 3102974 3103109 -82335371 + AluSq/x SINE Alu 1 135 -178 2241 104 0 3 chr17 3103109 3103418 -82335062 + AluSq SINE Alu 1 308 -5 530 273 23 11 chr17 3103418 3103594 -82334886 - L2 LINE L2 -782 2532 2355 1330 180 127 43 chr17 3103594 3103658 -82334822 - MLT1D LTR MaLR -2 503 446 410 0 0 20 chr17 3103658 3103709 -82334771 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1886 107 0 21 chr17 3103713 3103993 -82334487 - AluSq SINE Alu -39 274 1 1330 180 127 43 chr17 3103993 3104246 -82334234 - MLT1D LTR MaLR -61 444 154 1135 45 0 13 chr17 3104241 3104397 -82334083 - GSAT Satellite centromeric -32 185 32 * 1256 119 0 21 chr17 3104406 3104600 -82333880 - MLT1D LTR MaLR -315 190 1 452 292 176 14 chr17 3104602 3104972 -82333508 - L2 LINE L2 -1067 2247 1818 2530 43 0 3 chr17 3105152 3105457 -82333023 - AluY SINE Alu -7 304 1 207 272 25 86 chr17 3105596 3105677 -82332803 - L3 LINE CR1 -125 1452 1377 1982 91 0 17 chr17 3105809 3106117 -82332363 - AluSx SINE Alu 0 303 1 236 310 0 0 chr17 3107132 3107190 -82331290 + L2 LINE L2 3237 3294 -19 360 0 0 0 chr17 3107196 3107236 -82331244 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1907 133 7 10 chr17 3107350 3107644 -82330836 + AluSx SINE Alu 1 293 -19 2387 68 3 10 chr17 3107648 3107956 -82330524 + AluY SINE Alu 2 307 -4 286 127 0 18 chr17 3109484 3109539 -82328941 + (GGA)n Simple_repeat Simple_repeat 1 54 0 266 208 20 89 chr17 3109654 3109755 -82328725 - MIR3 SINE MIR -34 174 81 1908 120 0 43 chr17 3109818 3110144 -82328336 + AluSx SINE Alu 1 312 0 567 256 123 22 chr17 3110431 3110787 -82327693 - MLT1H1 LTR MaLR -8 547 86 521 227 14 168 chr17 3111377 3111428 -82327052 + MIR SINE MIR 21 78 -184 2512 62 0 0 chr17 3111428 3111734 -82326746 - AluY SINE Alu -5 306 1 521 227 14 168 chr17 3111734 3111826 -82326654 + MIR SINE MIR 78 182 -80 2052 114 3 19 chr17 3111826 3112141 -82326339 + AluSx SINE Alu 1 310 -2 521 227 14 168 chr17 3112141 3112173 -82326307 + MIR SINE MIR 182 217 -45 1076 147 0 6 chr17 3112173 3112336 -82326144 + FRAM SINE Alu 5 166 0 521 227 14 168 chr17 3112336 3112444 -82326036 + MIR SINE MIR 217 262 0 304 226 65 126 chr17 3113105 3113415 -82325065 - L2 LINE L2 -220 3052 2747 210 355 24 41 chr17 3113629 3113743 -82324737 + MIR3 SINE MIR 41 153 -55 1599 156 9 70 chr17 3113743 3113895 -82324585 + AluSx SINE Alu 1 124 -188 1798 126 0 48 chr17 3113895 3114205 -82324275 + AluSx SINE Alu 7 301 -11 1599 156 9 70 chr17 3114205 3114380 -82324100 + AluSx SINE Alu 124 308 -4 210 355 24 41 chr17 3114380 3114434 -82324046 + MIR3 SINE MIR 153 206 -2 237 208 250 10 chr17 3114494 3114590 -82323890 - MIR SINE MIR -69 139 21 585 100 0 0 chr17 3114924 3115004 -82323476 - AluSg/x SINE Alu -14 296 217 303 187 0 133 chr17 3115573 3115776 -82322704 + G-rich Low_complexity Low_complexity 4 179 0 1718 117 53 4 chr17 3116070 3116359 -82322121 + AluSx SINE Alu 6 307 0 2102 111 7 3 chr17 3117556 3117863 -82320617 - AluSp SINE Alu -4 309 2 2030 125 17 3 chr17 3117864 3118159 -82320321 - AluSx SINE Alu -13 299 1 389 278 26 57 chr17 3118210 3118389 -82320091 - MIR SINE MIR -61 147 14 503 299 144 10 chr17 3120386 3120580 -82317900 + MIR SINE MIR 8 227 -35 2134 119 3 10 chr17 3120599 3120909 -82317571 - AluSq SINE Alu -5 308 1 977 272 176 50 chr17 3120935 3121094 -82317386 + L2 LINE L2 2175 2313 -1000 2350 47 7 7 chr17 3121094 3121394 -82317086 + AluY SINE Alu 2 301 -10 977 272 176 50 chr17 3121394 3122053 -82316427 + L2 LINE L2 2313 3153 -160 2073 97 3 7 chr17 3122053 3122353 -82316127 - AluSx SINE Alu -13 299 1 977 272 176 50 chr17 3122353 3122536 -82315944 + L2 LINE L2 3153 3312 -1 2194 67 27 13 chr17 3123050 3123350 -82315130 + AluY SINE Alu 1 304 -7 1143 38 0 0 chr17 3123770 3123901 -82314579 + AluY SINE Alu 1 131 -180 2260 83 6 10 chr17 3123903 3124215 -82314265 + AluY SINE Alu 1 311 0 210 330 52 0 chr17 3124262 3124377 -82314103 + MIR3 SINE MIR 81 201 -7 2131 108 0 3 chr17 3125019 3125324 -82313156 + AluSq SINE Alu 1 304 -9 2182 103 6 13 chr17 3125921 3126232 -82312248 + AluSx SINE Alu 1 309 -3 803 222 0 30 chr17 3126498 3126665 -82311815 + FRAM SINE Alu 5 166 0 2492 74 0 0 chr17 3126667 3126978 -82311502 + AluSx SINE Alu 1 311 -1 193 264 58 58 chr17 3127257 3127344 -82311136 - MIR3 SINE MIR -15 193 107 2075 112 0 37 chr17 3127721 3128044 -82310436 + AluSx SINE Alu 1 311 -1 1191 126 0 6 chr17 3128044 3128218 -82310262 + AluSg/x SINE Alu 126 298 -14 2251 148 41 35 chr17 3128226 3128581 -82309899 - L1MC4 LINE L1 -201 7841 7481 2282 97 0 0 chr17 3128581 3128880 -82309600 - AluSq SINE Alu -14 299 1 2251 148 41 35 chr17 3128880 3128985 -82309495 - L1MC4 LINE L1 -561 7481 7378 2513 32 0 32 chr17 3129288 3129604 -82308876 + AluY SINE Alu 1 306 -5 1980 114 3 19 chr17 3129999 3130314 -82308166 + AluSx SINE Alu 1 310 -2 664 277 179 14 chr17 3131254 3131794 -82306686 - L2 LINE L2 0 3313 2667 694 249 69 11 chr17 3131951 3132140 -82306340 - MER3 DNA MER1_type 0 209 10 2096 84 0 0 chr17 3132229 3132504 -82305976 + AluSg SINE Alu 1 275 -35 216 301 107 102 chr17 3133068 3133380 -82305100 + L2 LINE L2 2255 2571 -743 2141 116 3 3 chr17 3133380 3133690 -82304790 - AluSx SINE Alu -2 310 1 216 301 107 102 chr17 3133690 3133799 -82304681 + L2 LINE L2 2571 2678 -636 362 20 0 20 chr17 3133861 3133910 -82304570 + AluY SINE Alu 1 48 -254 241 311 50 17 chr17 3133911 3134030 -82304450 - L3 LINE CR1 -147 1430 1308 1045 127 7 0 chr17 3134372 3134545 -82303935 - AluSq SINE Alu 0 307 134 2021 101 4 0 chr17 3134545 3134823 -82303657 - AluSx SINE Alu -12 300 22 433 246 141 7 chr17 3134823 3134965 -82303515 + MIR SINE MIR 101 261 -1 1492 123 11 84 chr17 3135097 3135240 -82303240 + AluJb SINE Alu 1 114 -198 2338 75 3 3 chr17 3135240 3135545 -82302935 + AluSp SINE Alu 1 305 -8 1492 123 11 84 chr17 3135545 3135685 -82302795 + AluJb SINE Alu 114 263 -49 283 219 55 0 chr17 3136109 3136182 -82302298 + MER105 DNA DNA 4 80 -124 1852 190 153 77 chr17 3136186 3136338 -82302142 + LTR65 LTR ERV1 1 140 -529 2268 61 0 19 chr17 3136338 3136648 -82301832 + AluY SINE Alu 1 304 -7 1852 190 153 77 chr17 3136648 3137014 -82301466 + LTR65 LTR ERV1 140 577 -92 2161 86 4 0 chr17 3137014 3137293 -82301187 + AluSx SINE Alu 5 307 0 208 0 0 0 chr17 3137293 3137316 -82301164 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1852 190 153 77 chr17 3137316 3137415 -82301065 + LTR65 LTR ERV1 577 667 -2 2198 116 0 3 chr17 3137449 3137759 -82300721 + AluSx SINE Alu 1 309 -3 875 191 73 29 chr17 3138328 3138532 -82299948 + MER20 DNA MER1_type 6 218 -1 1404 96 5 0 chr17 3138607 3138805 -82299675 - AluSg/x SINE Alu -7 302 104 1045 127 7 0 chr17 3139035 3139208 -82299272 - AluSq SINE Alu 0 307 134 1918 111 4 4 chr17 3139208 3139487 -82298993 - AluSx SINE Alu -12 300 22 460 248 142 0 chr17 3139487 3139628 -82298852 + MIR SINE MIR 101 261 -1 1492 123 11 84 chr17 3139760 3139903 -82298577 + AluJb SINE Alu 1 114 -198 2290 80 10 0 chr17 3139903 3140205 -82298275 + AluSp SINE Alu 1 305 -8 1492 123 11 84 chr17 3140205 3140345 -82298135 + AluJb SINE Alu 114 263 -49 572 187 18 160 chr17 3140767 3140844 -82297636 + MER105 DNA DNA 4 90 -114 2104 193 159 48 chr17 3140844 3140995 -82297485 + LTR65 LTR ERV1 1 134 -535 2402 62 0 7 chr17 3140995 3141301 -82297179 + AluY SINE Alu 1 304 -7 2104 193 159 48 chr17 3141301 3141650 -82296830 + LTR65 LTR ERV1 134 582 -87 2148 86 4 0 chr17 3141650 3141952 -82296528 + AluSx SINE Alu 5 307 0 2104 193 159 48 chr17 3141952 3142051 -82296429 + LTR65 LTR ERV1 582 669 0 572 187 18 160 chr17 3142051 3142082 -82296398 + MER105 DNA DNA 90 124 -80 2222 106 3 3 chr17 3142082 3142394 -82296086 + AluSq SINE Alu 1 312 -1 572 187 18 160 chr17 3142394 3142503 -82295977 + MER105 DNA DNA 124 191 -13 257 304 104 112 chr17 3142567 3142827 -82295653 + L2 LINE L2 3007 3264 -8 2076 108 0 11 chr17 3143268 3143583 -82294897 - AluSx SINE Alu 0 312 1 1995 100 0 4 chr17 3143749 3144019 -82294461 + AluSx SINE Alu 3 271 -41 2064 100 0 29 chr17 3144712 3145021 -82293459 - AluSx SINE Alu -12 300 1 2273 95 3 3 chr17 3145098 3145404 -82293076 + AluSx SINE Alu 1 306 -6 702 223 0 42 chr17 3145409 3145575 -82292905 + AluJb SINE Alu 140 298 -14 2366 68 0 10 chr17 3146084 3146395 -82292085 + AluY SINE Alu 1 308 -3 2115 96 0 22 chr17 3146759 3147071 -82291409 + AluSg SINE Alu 1 305 -5 825 101 0 17 chr17 3147125 3147244 -82291236 - FLAM_A SINE Alu -16 117 1 993 298 51 72 chr17 3150522 3151274 -82287206 + L2 LINE L2 2266 3001 -312 2447 65 0 3 chr17 3151292 3151602 -82286878 - AluSx SINE Alu -3 309 1 2003 65 47 14 chr17 3151608 3151908 -82286572 - AluSp SINE Alu 0 309 1 1015 106 0 0 chr17 3151910 3152042 -82286438 - AluSq/x SINE Alu -180 132 1 225 265 0 0 chr17 3152043 3152092 -82286388 + L2 LINE L2 3022 3070 -243 2004 137 0 19 chr17 3152232 3152545 -82285935 + AluJo SINE Alu 5 311 -1 1972 145 0 0 chr17 3152577 3152867 -82285613 + AluJb SINE Alu 1 290 -22 2213 103 0 3 chr17 3152924 3153226 -82285254 + AluSx SINE Alu 1 301 -11 1915 116 7 7 chr17 3153781 3154093 -82284387 + AluSx SINE Alu 1 312 0 2067 123 0 16 chr17 3154545 3154862 -82283618 - AluSx SINE Alu 0 312 1 474 310 58 65 chr17 3155400 3155661 -82282819 - MLT1L LTR MaLR -221 394 136 268 320 13 0 chr17 3156094 3156169 -82282311 - L3 LINE CR1 -21 1556 1481 2037 91 0 53 chr17 3157622 3157940 -82280540 - AluSg SINE Alu -9 301 1 1333 181 15 37 chr17 3157960 3158230 -82280250 - AluJo SINE Alu -34 278 15 741 319 94 58 chr17 3159215 3159290 -82279190 - L1M4 LINE L1 -1386 4760 4689 2366 81 0 0 chr17 3159290 3159587 -82278893 + AluSc SINE Alu 1 297 -12 2240 73 7 0 chr17 3159589 3159877 -82278603 + AluY SINE Alu 1 290 -21 741 319 94 58 chr17 3159877 3160037 -82278443 - L1M4 LINE L1 -1457 4689 4536 2375 87 3 0 chr17 3160037 3160347 -82278133 - AluSp SINE Alu -1 312 2 741 319 94 58 chr17 3160347 3160437 -82278043 - L1M4 LINE L1 -1610 4536 4451 1429 176 33 23 chr17 3160437 3160738 -82277742 - AluJo SINE Alu -8 304 1 741 319 94 58 chr17 3160738 3160864 -82277616 - L1M4 LINE L1 -1695 4451 4331 1975 88 14 20 chr17 3160864 3161161 -82277319 - AluSx SINE Alu -17 295 1 741 319 94 58 chr17 3161161 3161287 -82277193 - L1M4 LINE L1 -1815 4331 4156 994 116 0 0 chr17 3161978 3162142 -82276338 + AluSg/x SINE Alu 145 308 0 2185 85 3 29 chr17 3162155 3162471 -82276009 + AluSx SINE Alu 5 312 0 1964 133 7 10 chr17 3162898 3163207 -82275273 - AluSx SINE Alu -4 308 1 2017 121 0 0 chr17 3163396 3163709 -82274771 - AluSx SINE Alu 0 313 1 2051 85 14 11 chr17 3163907 3164225 -82274255 - AluSg SINE Alu 0 319 1 546 175 133 33 chr17 3164232 3164352 -82274128 - FLAM_A SINE Alu -1 132 1 1966 103 0 0 chr17 3164636 3164907 -82273573 + AluSx SINE Alu 34 304 -8 228 296 0 0 chr17 3165209 3165263 -82273217 - L1ME LINE L1 -539 5582 5529 1251 53 0 0 chr17 3165775 3165927 -82272553 - AluYa5 SINE Alu -8 303 152 1135 101 0 0 chr17 3166027 3166176 -82272304 - AluSg SINE Alu -161 149 1 1727 155 28 17 chr17 3166581 3166872 -82271608 + AluJb SINE Alu 5 298 -14 250 322 106 28 chr17 3167235 3167415 -82271065 + MIR SINE MIR 5 198 -64 353 332 89 52 chr17 3168242 3168567 -82269913 + HAL1b LINE L1 901 1237 -111 1744 169 0 32 chr17 3168602 3168916 -82269564 + AluJb SINE Alu 1 304 -8 346 277 104 13 chr17 3168954 3169185 -82269295 + L1M4 LINE L1 5140 5391 -755 1294 97 0 6 chr17 3169215 3169391 -82269089 + AluSq SINE Alu 3 177 -136 256 83 0 42 chr17 3169491 3169539 -82268941 + Alu SINE Alu 247 292 -8 234 313 115 0 chr17 3170225 3170321 -82268159 - MIR3 SINE MIR -11 197 91 2279 50 9 41 chr17 3170379 3170698 -82267782 + AluY SINE Alu 3 311 0 661 338 80 15 chr17 3171038 3171375 -82267105 + L2 LINE L2 2914 3272 0 517 256 46 65 chr17 3171573 3171692 -82266788 - L1M4 LINE L1 -2687 3459 3339 2515 36 0 0 chr17 3171692 3171993 -82266487 - AluY SINE Alu -10 301 1 517 256 46 65 chr17 3171993 3172322 -82266158 - L1M4 LINE L1 -2807 3339 3005 803 39 10 0 chr17 3172322 3172425 -82266055 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 1877 128 4 0 chr17 3172427 3172701 -82265779 - AluSx SINE Alu -37 275 1 1589 178 0 61 chr17 3172706 3173032 -82265448 - AluJb SINE Alu 0 312 7 517 256 46 65 chr17 3173032 3173198 -82265282 - L1M4 LINE L1 -3146 3000 2675 2368 69 0 0 chr17 3173199 3173490 -82264990 + AluSc SINE Alu 5 295 -14 2331 76 10 0 chr17 3173899 3174202 -82264278 - AluSx SINE Alu -6 306 1 1799 131 3 13 chr17 3174596 3174894 -82263586 - AluSq SINE Alu 0 313 19 446 224 33 20 chr17 3174994 3175146 -82263334 + L1M4 LINE L1 2227 2380 -3766 1986 115 30 3 chr17 3175151 3175446 -82263034 - AluSq SINE Alu -9 304 2 217 257 206 37 chr17 3175811 3175947 -82262533 + L2 LINE L2 3112 3270 -2 335 283 52 38 chr17 3175974 3176168 -82262312 + MIR SINE MIR 18 211 -51 239 274 170 22 chr17 3176465 3176600 -82261880 + MIR3 SINE MIR 3 157 -51 2141 95 3 3 chr17 3177974 3178270 -82260210 - AluSx SINE Alu -16 296 1 2216 88 7 3 chr17 3178485 3178781 -82259699 - AluSg SINE Alu -13 297 1 240 237 246 26 chr17 3179563 3179677 -82258803 - MER5A DNA MER1_type 0 189 51 2224 102 0 0 chr17 3179710 3180013 -82258467 + AluSx SINE Alu 1 303 -9 735 266 58 0 chr17 3182061 3182249 -82256231 + MIR SINE MIR 43 241 -21 2259 100 3 0 chr17 3183265 3183574 -82254906 - AluSp SINE Alu -3 310 1 657 209 0 0 chr17 3187139 3187292 -82251188 + (CA)n Simple_repeat Simple_repeat 1 153 0 1936 68 61 46 chr17 3189348 3189651 -82248829 + AluY SINE Alu 1 307 0 414 130 0 0 chr17 3189792 3189861 -82248619 + L1MC4 LINE L1 7475 7543 -499 1652 165 47 0 chr17 3189868 3190165 -82248315 + AluJb SINE Alu 1 311 -1 1807 179 8 66 chr17 3190184 3190762 -82247718 + L1MB5 LINE L1 5099 5651 -533 2054 122 3 6 chr17 3190762 3191073 -82247407 + AluSq SINE Alu 1 310 -3 1807 179 8 66 chr17 3191073 3191131 -82247349 + L1MB5 LINE L1 5651 5711 -473 307 109 31 47 chr17 3191132 3191196 -82247284 - AluSq SINE Alu -1 300 238 1128 144 0 28 chr17 3191196 3191376 -82247104 - AluSq SINE Alu -137 176 2 1139 186 4 30 chr17 3191379 3191615 -82246865 + L1MB5 LINE L1 5730 5959 -215 1438 86 5 10 chr17 3191615 3191813 -82246667 - AluSx SINE Alu -115 197 1 605 213 20 25 chr17 3191855 3192024 -82246456 + MLT1B LTR MaLR 166 342 -36 22 35 0 0 chr17 3193457 3193486 -82244994 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 3193569 3193598 -82244882 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2220 60 50 10 chr17 3193748 3194048 -82244432 - AluSx SINE Alu 0 312 1 325 330 54 0 chr17 3194902 3195014 -82243466 - MER5A DNA MER1_type -9 180 63 433 333 128 27 chr17 3195040 3195337 -82243143 + L2 LINE L2 2986 3312 -1 225 241 69 0 chr17 3196177 3196235 -82242245 - MER112 DNA MER1_type -31 229 168 1218 182 0 55 chr17 3196239 3196364 -82242116 + AluJo SINE Alu 1 131 -181 300 27 0 0 chr17 3196364 3196401 -82242079 + (CA)n Simple_repeat Simple_repeat 2 38 0 1218 182 0 55 chr17 3196401 3196421 -82242059 + AluJo SINE Alu 131 151 -161 1784 139 17 10 chr17 3196421 3196709 -82241771 + AluJo SINE Alu 1 290 -22 1218 182 0 55 chr17 3196709 3196815 -82241665 + AluJo SINE Alu 151 239 -73 259 228 145 55 chr17 3196816 3196833 -82241647 - MER112 DNA MER1_type -101 159 145 1982 122 0 0 chr17 3196833 3197293 -82241187 + AluSg SINE Alu 2 461 0 259 228 145 55 chr17 3197293 3197417 -82241063 - MER112 DNA MER1_type -115 145 2 2253 91 0 0 chr17 3197568 3197865 -82240615 + AluSg SINE Alu 1 297 -13 1648 181 24 0 chr17 3197937 3198230 -82240250 + MSTB LTR MaLR 1 300 -126 1309 100 105 9 chr17 3198457 3198667 -82239813 - MER30 DNA MER1_type 0 230 1 2020 69 47 7 chr17 3198732 3199028 -82239452 + AluSp SINE Alu 3 309 0 1792 57 4 0 chr17 3199034 3199262 -82239218 + AluSq SINE Alu 1 229 -84 2137 110 0 25 chr17 3199416 3199734 -82238746 - AluSg SINE Alu 0 310 1 298 247 62 0 chr17 3200018 3200099 -82238381 + L1ME LINE L1 5693 5778 -343 502 155 10 62 chr17 3200559 3200656 -82237824 - FRAM SINE Alu -81 95 4 272 343 72 12 chr17 3200693 3200859 -82237621 + L2 LINE L2 2883 3058 -214 1482 157 52 28 chr17 3200997 3201283 -82237197 - AluJb SINE Alu -17 295 3 2322 77 3 0 chr17 3201334 3201634 -82236846 - AluSp SINE Alu -12 301 1 2001 113 7 20 chr17 3201747 3202049 -82236431 - AluSx SINE Alu -14 298 1 640 257 48 62 chr17 3202242 3202438 -82236042 + MIR SINE MIR 38 231 -31 2167 97 3 19 chr17 3202438 3202747 -82235733 - AluSx SINE Alu -8 304 1 640 257 48 62 chr17 3202747 3202779 -82235701 + MIR SINE MIR 231 262 0 1432 66 11 0 chr17 3205270 3205453 -82233027 - AluSg/x SINE Alu -9 303 119 1902 93 0 76 chr17 3205557 3205859 -82232621 - AluSx SINE Alu -3 309 31 4870 89 136 33 chr17 3205859 3206608 -82231872 + LTR12 LTR ERV1 1 826 0 1517 165 9 71 chr17 3207034 3207356 -82231124 + AluJo SINE Alu 1 302 -10 2320 80 0 13 chr17 3207630 3207943 -82230537 + AluSp SINE Alu 1 309 -4 2137 112 3 3 chr17 3208536 3208840 -82229640 + AluSp SINE Alu 1 304 -9 1681 165 0 26 chr17 3209612 3209772 -82228708 - AluJb SINE Alu -17 295 145 2092 113 3 3 chr17 3209772 3210064 -82228416 - AluSc SINE Alu -17 292 1 1681 165 0 26 chr17 3210064 3210206 -82228274 - AluJb SINE Alu -167 145 1 1775 85 0 0 chr17 3210482 3210717 -82227763 - AluSc SINE Alu -70 239 5 692 236 109 0 chr17 3210717 3210946 -82227534 + Charlie4a DNA MER1_type 159 412 -96 2536 43 0 0 chr17 3211588 3211887 -82226593 + AluY SINE Alu 1 299 -12 180 0 0 0 chr17 3211887 3211907 -82226573 + (TA)n Simple_repeat Simple_repeat 2 21 0 209 330 78 0 chr17 3212118 3212221 -82226259 + MIR SINE MIR 30 140 -68 555 259 0 0 chr17 3212855 3213196 -82225284 + (CA)n Simple_repeat Simple_repeat 1 341 0 249 266 0 0 chr17 3213211 3213305 -82225175 + (CA)n Simple_repeat Simple_repeat 1 94 0 185 268 0 0 chr17 3213583 3213624 -82224856 + L2 LINE L2 3206 3246 -26 325 227 0 23 chr17 3214214 3214302 -82224178 - AluJ/FRAM SINE Alu 0 302 217 * 333 250 24 0 chr17 3214261 3214345 -82224135 + AluY SINE Alu 216 301 0 425 261 15 46 chr17 3214372 3214502 -82223978 + L1MC5 LINE L1 6995 7120 -841 280 109 18 18 chr17 3214514 3214569 -82223911 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2045 137 0 3 chr17 3214569 3214882 -82223598 - AluSx SINE Alu 0 312 1 262 274 68 41 chr17 3214929 3215075 -82223405 + L1MC4 LINE L1 7100 7249 -793 252 318 103 0 chr17 3215079 3215186 -82223294 + L1MC4 LINE L1 7323 7440 -602 286 286 26 0 chr17 3215191 3215268 -82223212 - MER5A DNA MER1_type -107 82 4 1843 119 3 26 chr17 3215310 3215601 -82222879 + AluSx SINE Alu 1 286 -26 192 40 0 0 chr17 3215601 3215626 -82222854 + (CA)n Simple_repeat Simple_repeat 2 26 0 1843 119 3 26 chr17 3215626 3215637 -82222843 + AluSx SINE Alu 286 296 -16 318 296 77 86 chr17 3215719 3215971 -82222509 + L1MC5 LINE L1 7340 7593 -368 2436 53 0 3 chr17 3215971 3216272 -82222208 + AluY SINE Alu 1 300 -11 318 296 77 86 chr17 3216272 3216386 -82222094 + L1MC5 LINE L1 7593 7704 -257 2165 109 0 0 chr17 3216386 3216680 -82221800 - AluSx SINE Alu -18 294 1 318 296 77 86 chr17 3216680 3216754 -82221726 + L1MC5 LINE L1 7704 7777 -184 466 253 136 6 chr17 3216755 3216917 -82221563 - MER5A DNA MER1_type -3 186 4 2078 94 16 10 chr17 3217209 3217517 -82220963 - AluSx SINE Alu -2 310 1 2066 112 3 7 chr17 3218146 3218451 -82220029 - AluSg SINE Alu -6 304 1 729 172 0 0 chr17 3218451 3218567 -82219913 - AluSg/x SINE Alu -14 296 181 1203 117 11 0 chr17 3218767 3218946 -82219534 - AluY SINE Alu -130 181 1 2334 83 0 3 chr17 3219074 3219376 -82219104 - AluSg SINE Alu -9 301 1 854 120 0 35 chr17 3219377 3219519 -82218961 - AluJo SINE Alu -175 137 1 215 333 23 0 chr17 3219560 3219647 -82218833 + L2 LINE L2 3157 3245 -27 185 268 0 0 chr17 3220554 3220595 -82217885 - L2 LINE L2 -26 3246 3206 249 266 0 0 chr17 3220874 3220968 -82217512 + (TG)n Simple_repeat Simple_repeat 1 94 0 627 253 0 0 chr17 3220983 3221332 -82217148 + (TG)n Simple_repeat Simple_repeat 1 349 0 191 333 88 0 chr17 3221966 3222068 -82216412 - MIR SINE MIR -68 140 30 216 0 0 0 chr17 3222279 3222303 -82216177 + (TA)n Simple_repeat Simple_repeat 2 25 0 2511 47 0 0 chr17 3222303 3222599 -82215881 - AluY SINE Alu -15 296 1 2174 98 0 0 chr17 3222599 3222895 -82215585 - AluSx SINE Alu -16 296 1 231 265 47 47 chr17 3223532 3223702 -82214778 + L2 LINE L2 2868 3037 -235 299 275 75 50 chr17 3224653 3224813 -82213667 + MIR3 SINE MIR 30 193 -15 1817 119 29 4 chr17 3224981 3225284 -82213196 + AluSx SINE Alu 1 310 0 679 232 7 13 chr17 3227196 3227351 -82211129 + MER3 DNA MER1_type 3 156 -53 1328 236 66 43 chr17 3228360 3228873 -82209607 + L1MC4 LINE L1 7516 8040 -2 26 0 0 0 chr17 3228874 3228900 -82209580 + AT_rich Low_complexity Low_complexity 1 26 0 2123 65 3 20 chr17 3228952 3229245 -82209235 + AluY SINE Alu 1 288 -23 487 215 25 66 chr17 3229245 3229366 -82209114 + FLAM_A SINE Alu 11 126 -16 1917 128 7 10 chr17 3229427 3229725 -82208755 + AluSx SINE Alu 1 297 -15 335 296 181 10 chr17 3229895 3230094 -82208386 - MIR SINE MIR -18 244 12 2264 81 10 0 chr17 3230131 3230429 -82208051 - AluSx SINE Alu -11 301 1 580 229 122 12 chr17 3230502 3230705 -82207775 + MLT1A2 LTR MaLR 1 236 -154 324 250 62 39 chr17 3230954 3231105 -82207375 - MIR3 SINE MIR -20 188 33 2284 77 0 3 chr17 3231254 3231551 -82206929 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 3231891 3231911 -82206569 + (A)n Simple_repeat Simple_repeat 1 20 0 190 288 106 24 chr17 3232700 3232870 -82205610 - L2 LINE L2 0 3313 3130 465 304 37 12 chr17 3232949 3233110 -82205370 - L2 LINE L2 -20 3252 3088 659 117 11 0 chr17 3233919 3234013 -82204467 - FRAM SINE Alu -24 152 58 458 164 31 23 chr17 3234055 3234178 -82204302 + L1MB8 LINE L1 5317 5441 -727 803 128 7 54 chr17 3234178 3234326 -82204154 + FLAM_C SINE Alu 1 141 -2 3121 163 82 43 chr17 3234329 3234600 -82203880 + L1MB8 LINE L1 5428 5687 -491 2083 104 3 10 chr17 3234600 3234909 -82203571 + AluSq SINE Alu 1 307 -6 3121 163 82 43 chr17 3234909 3235359 -82203121 + L1MB8 LINE L1 5687 6177 -1 22 0 0 0 chr17 3237414 3237436 -82201044 + AT_rich Low_complexity Low_complexity 1 22 0 328 129 32 0 chr17 3238926 3238988 -82199492 - AluSq SINE Alu 0 302 239 1189 99 0 12 chr17 3238988 3239150 -82199330 - AluSq SINE Alu -153 160 1 248 319 44 44 chr17 3240465 3240578 -82197902 + L2 LINE L2 2981 3093 -179 259 292 15 0 chr17 3240592 3240657 -82197823 + L2 LINE L2 3245 3310 -3 1226 194 116 47 chr17 3240771 3241091 -82197389 - MER2 DNA MER2_type -2 342 1 2182 60 21 32 chr17 3241958 3242243 -82196237 + AluY SINE Alu 14 295 -16 289 274 89 32 chr17 3242372 3242496 -82195984 + L1ME4a LINE L1 5389 5519 -602 2472 72 3 3 chr17 3242545 3242851 -82195629 + AluY SINE Alu 3 308 -3 367 259 147 45 chr17 3242947 3243159 -82195321 + L1ME4a LINE L1 5718 5974 -147 231 36 0 0 chr17 3243159 3243187 -82195293 + (CA)n Simple_repeat Simple_repeat 1 28 0 367 259 147 45 chr17 3243187 3243287 -82195193 + L1ME4a LINE L1 5974 6062 -59 303 140 0 0 chr17 3243689 3243739 -82194741 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2680 213 79 20 chr17 3244005 3244476 -82194004 - MER82 DNA MER2_type -6 647 131 2463 72 0 10 chr17 3244476 3244783 -82193697 + AluY SINE Alu 1 304 -7 2680 213 79 20 chr17 3244783 3244916 -82193564 - MER82 DNA MER2_type -522 131 7 1808 171 0 33 chr17 3245156 3245460 -82193020 - AluJb SINE Alu -14 298 5 2202 101 3 10 chr17 3245873 3246171 -82192309 + AluSg SINE Alu 1 296 -14 2319 98 0 0 chr17 3246641 3246938 -82191542 - AluSx SINE Alu -5 307 11 2865 199 155 57 chr17 3248066 3248259 -82190221 + L1MC4 LINE L1 6813 6986 -1056 2228 74 3 101 chr17 3248259 3248596 -82189884 + AluSc SINE Alu 1 304 -5 2865 199 155 57 chr17 3248596 3248814 -82189666 + L1MC4 LINE L1 6986 7181 -861 826 162 0 29 chr17 3248814 3248950 -82189530 - FLAM_C SINE Alu -1 132 1 2865 199 155 57 chr17 3248950 3249538 -82188942 + L1MC4 LINE L1 7181 7911 -131 330 132 0 0 chr17 3249553 3249606 -82188874 + (CATA)n Simple_repeat Simple_repeat 2 54 0 317 167 50 0 chr17 3249606 3249666 -82188814 - L1MCa LINE L1 -4358 2068 2006 182 114 0 29 chr17 3249667 3249702 -82188778 + (CATA)n Simple_repeat Simple_repeat 4 37 0 322 227 15 0 chr17 3249702 3249768 -82188712 - L1MCa LINE L1 -4363 2063 1997 218 295 16 0 chr17 3250036 3250097 -82188383 - L3 LINE CR1 -5 1572 1511 22 0 0 0 chr17 3250293 3250315 -82188165 + AT_rich Low_complexity Low_complexity 1 22 0 819 243 128 16 chr17 3250418 3250669 -82187811 + L2 LINE L2 3035 3313 0 1592 177 57 13 chr17 3251592 3251991 -82186489 + AluJo SINE Alu 1 412 0 2153 39 19 8 chr17 3251991 3252251 -82186229 + AluY SINE Alu 33 295 -16 286 171 89 0 chr17 3252251 3252367 -82186113 + GA-rich Low_complexity Low_complexity 9 138 0 325 372 16 0 chr17 3252856 3252985 -82185495 + MIR3 SINE MIR 60 190 -18 235 170 0 0 chr17 3253082 3253129 -82185351 - L1MA10 LINE L1 -10 6324 6278 2246 129 0 0 chr17 3253137 3253446 -82185034 - AluSx SINE Alu -3 309 1 882 220 6 6 chr17 3253448 3253630 -82184850 + MER58A DNA MER1_type 43 224 0 234 312 35 28 chr17 3254861 3255002 -82183478 + L1ME4a LINE L1 4561 4702 -1444 383 217 28 32 chr17 3255047 3255226 -82183254 + L1M2 LINE L1 5283 5463 -693 404 296 165 53 chr17 3255403 3255761 -82182719 + L1ME4a LINE L1 5620 6017 -104 2266 83 10 0 chr17 3255822 3256110 -82182370 - AluSc SINE Alu -18 291 1 2474 82 3 0 chr17 3256133 3256438 -82182042 - AluSp SINE Alu -7 306 1 2302 95 7 3 chr17 3256519 3256825 -82181655 + AluY SINE Alu 1 307 -4 1804 84 33 18 chr17 3256972 3257129 -82181351 + L1MA1 LINE L1 6026 6190 -112 2371 109 0 0 chr17 3257129 3257431 -82181049 + AluSx SINE Alu 1 302 -10 1804 84 33 18 chr17 3257431 3257546 -82180934 + L1MA1 LINE L1 6190 6302 0 2401 74 10 3 chr17 3257579 3257888 -82180592 + AluY SINE Alu 1 311 0 21 100 0 0 chr17 3258001 3258071 -82180409 + AT_rich Low_complexity Low_complexity 1 70 0 1925 154 0 10 chr17 3258199 3258491 -82179989 + AluJo SINE Alu 5 293 -19 942 153 35 0 chr17 3258491 3258635 -82179845 - AluJb SINE Alu -162 150 2 810 135 15 60 chr17 3258752 3258885 -82179595 + FLAM_C SINE Alu 1 127 -16 1570 109 9 5 chr17 3259721 3259932 -82178548 + AluSp SINE Alu 1 212 -101 318 130 0 0 chr17 3259932 3259986 -82178494 + FLAM SINE Alu 78 131 -2 285 366 92 7 chr17 3260079 3260232 -82178248 + L3 LINE CR1 355 520 -1057 808 299 267 20 chr17 3260262 3261000 -82177480 + L3 LINE CR1 648 1567 -10 706 274 101 21 chr17 3261111 3261348 -82177132 + MIR SINE MIR 7 262 0 816 285 37 32 chr17 3261494 3261600 -82176880 - MIR SINE MIR -1 261 157 2487 92 0 0 chr17 3261600 3261905 -82176575 + AluSg SINE Alu 1 305 -5 816 285 37 32 chr17 3261905 3262044 -82176436 - MIR SINE MIR -105 157 15 240 242 0 32 chr17 3262050 3262096 -82176384 + MER5B DNA MER1_type 1 46 -132 2181 133 3 0 chr17 3262096 3262405 -82176075 + AluSg SINE Alu 1 310 0 240 242 0 32 chr17 3262405 3262420 -82176060 + MER5B DNA MER1_type 46 60 -118 2195 85 32 0 chr17 3262444 3262727 -82175753 + AluSg SINE Alu 1 292 -18 1767 100 60 8 chr17 3262738 3262988 -82175492 + AluSg SINE Alu 45 307 -3 29 0 0 0 chr17 3263207 3263236 -82175244 + AT_rich Low_complexity Low_complexity 1 29 0 320 282 137 3 chr17 3263237 3263354 -82175126 - MIR SINE MIR -65 143 55 644 278 44 8 chr17 3263861 3264113 -82174367 + MIR SINE MIR 2 262 0 2336 99 0 0 chr17 3264582 3264875 -82173605 - AluSx SINE Alu -19 293 1 208 205 26 0 chr17 3265041 3265080 -82173400 + MIR SINE MIR 40 79 -129 335 200 0 0 chr17 3265651 3265711 -82172769 + L2 LINE L2 3213 3272 0 251 330 22 11 chr17 3265795 3265886 -82172594 - MIR SINE MIR -115 147 56 2257 87 35 0 chr17 3266213 3266502 -82171978 - AluSc SINE Alu -10 299 1 1183 155 0 0 chr17 3266902 3267076 -82171404 + AluJb SINE Alu 125 298 -14 2050 129 0 0 chr17 3267375 3267654 -82170826 + AluSx SINE Alu 6 284 -28 1716 166 8 0 chr17 3267906 3268171 -82170309 - AluJb SINE Alu -45 267 1 1580 186 43 7 chr17 3268460 3268761 -82169719 - AluJo SINE Alu 0 312 1 2140 124 10 3 chr17 3268764 3269070 -82169410 - AluSx SINE Alu -3 309 2 336 331 23 39 chr17 3269405 3269535 -82168945 + MIR SINE MIR 3 130 -132 187 253 203 0 chr17 3269485 3269564 -82168916 + L2 LINE L2 2019 2113 -1201 * 206 220 231 22 chr17 3269705 3269796 -82168684 + L2 LINE L2 3192 3301 -12 1911 100 4 0 chr17 3269796 3270045 -82168435 + AluSp SINE Alu 1 250 -63 946 44 9 0 chr17 3270047 3270180 -82168300 + AluSp/q SINE Alu 169 302 0 251 183 366 0 chr17 3270296 3270367 -82168113 - FLAM_A SINE Alu -23 110 14 591 226 242 0 chr17 3271761 3271947 -82166533 - MIR SINE MIR -2 260 30 184 271 294 0 chr17 3272046 3272131 -82166349 - MIR SINE MIR -63 145 36 1039 121 0 0 chr17 3272269 3272513 -82165967 - FLAM_C SINE Alu 0 244 1 247 254 127 87 chr17 3272515 3272641 -82165839 + MIR3 SINE MIR 58 188 -20 542 208 82 60 chr17 3272671 3272854 -82165626 + MIR SINE MIR 20 206 -56 2206 84 49 0 chr17 3272999 3273284 -82165196 + AluSg SINE Alu 1 299 -11 180 0 0 0 chr17 3273315 3273335 -82165145 + (TG)n Simple_repeat Simple_repeat 2 21 0 627 253 78 34 chr17 3273786 3274075 -82164405 - LTR37B LTR ERV1 0 458 139 2670 43 0 0 chr17 3274087 3274389 -82164091 - AluY SINE Alu -9 302 1 2577 70 0 10 chr17 3274394 3274708 -82163772 - AluY SINE Alu 0 311 1 2143 104 0 7 chr17 3274890 3275177 -82163303 - AluSg1 SINE Alu -23 286 2 328 320 77 37 chr17 3275197 3275469 -82163011 - L2 LINE L2 -1267 2047 1765 2071 135 0 0 chr17 3275501 3275809 -82162671 - AluSx SINE Alu 0 308 1 2169 95 48 7 chr17 3276202 3276496 -82161984 - AluSx SINE Alu -6 306 1 209 271 0 17 chr17 3276523 3276582 -82161898 + CT-rich Low_complexity Low_complexity 1 58 0 2183 90 4 0 chr17 3276583 3276861 -82161619 - AluSg SINE Alu -31 279 1 507 311 167 37 chr17 3276876 3277550 -82160930 + L2 LINE L2 1928 2513 -759 1926 163 10 0 chr17 3277550 3277856 -82160624 - AluJb SINE Alu -1 311 3 507 311 167 37 chr17 3277856 3278380 -82160100 + L2 LINE L2 2513 3272 0 2402 66 0 7 chr17 3278515 3278803 -82159677 + AluSg SINE Alu 10 295 -15 237 33 0 0 chr17 3278804 3278834 -82159646 + (TCTCCC)n Simple_repeat Simple_repeat 2 31 0 10935 30 16 87 chr17 3278834 3280317 -82158163 + SVA Other Other 1 1378 -8 537 115 29 132 chr17 3280330 3280481 -82157999 + L1MC3 LINE L1 5891 6056 -1729 2165 105 0 39 chr17 3280481 3280653 -82157827 - AluSg SINE Alu -16 294 138 2360 70 0 3 chr17 3280653 3280939 -82157541 - AluY SINE Alu -26 285 1 2165 105 0 39 chr17 3280939 3281072 -82157408 - AluSg SINE Alu -172 138 1 537 115 29 132 chr17 3281072 3281334 -82157146 + L1MC3 LINE L1 6056 6343 -1442 2155 104 14 0 chr17 3281334 3281623 -82156857 - AluSx SINE Alu -19 293 1 537 115 29 132 chr17 3281623 3281675 -82156805 + L1MC3 LINE L1 6343 6399 -1386 2596 54 0 0 chr17 3281675 3281971 -82156509 - AluY SINE Alu -15 296 1 537 115 29 132 chr17 3281971 3281988 -82156492 + L1MC3 LINE L1 6399 7783 -2 562 189 9 9 chr17 3282002 3282108 -82156372 + MER5B DNA MER1_type 46 151 -27 207 313 0 0 chr17 3283133 3283181 -82155299 - L2 LINE L2 -18 3254 3207 3904 183 55 31 chr17 3283218 3283297 -82155183 + MER21B LTR ERV1 6 82 -781 2571 56 0 3 chr17 3283297 3283601 -82154879 - AluY SINE Alu -8 303 1 3904 183 55 31 chr17 3283601 3284282 -82154198 + MER21B LTR ERV1 82 790 -73 2391 56 42 0 chr17 3284282 3284568 -82153912 - AluY SINE Alu -13 298 1 3904 183 55 31 chr17 3284568 3284638 -82153842 + MER21B LTR ERV1 790 857 -6 2275 70 20 20 chr17 3284655 3284955 -82153525 + AluSx SINE Alu 5 304 -8 364 284 63 0 chr17 3284969 3285064 -82153416 - MIR SINE MIR -115 147 47 2025 128 0 23 chr17 3287860 3288164 -82150316 - AluJb SINE Alu -15 297 1 2180 105 3 10 chr17 3288441 3288745 -82149735 + AluSq SINE Alu 1 302 -11 714 175 0 17 chr17 3288819 3288939 -82149541 + FLAM_C SINE Alu 1 118 -25 2017 116 17 0 chr17 3289177 3289469 -82149011 - AluJo SINE Alu -9 303 7 2429 55 0 0 chr17 3289480 3289773 -82148707 - AluY SINE Alu -18 293 1 414 141 0 0 chr17 3289773 3289844 -82148636 - MER94 DNA DNA -53 81 11 813 293 112 49 chr17 3291846 3291951 -82146529 - L2 LINE L2 0 3313 3216 2207 91 0 7 chr17 3291951 3292248 -82146232 - AluSq SINE Alu -18 295 1 813 293 112 49 chr17 3292248 3292842 -82145638 - L2 LINE L2 -97 3216 2564 243 263 66 13 chr17 3293754 3293830 -82144650 + L2 LINE L2 3192 3271 -1 2243 90 0 3 chr17 3293879 3294178 -82144302 - AluY SINE Alu -11 300 3 2355 57 37 0 chr17 3294184 3294484 -82143996 - AluY SINE Alu 0 311 1 298 293 40 0 chr17 3295436 3295535 -82142945 - MIR SINE MIR -59 149 47 2500 51 0 0 chr17 3295596 3295892 -82142588 - AluY SINE Alu -15 296 1 2462 64 0 6 chr17 3296529 3296883 -82141597 - AluY SINE Alu 0 352 1 2080 82 89 0 chr17 3296891 3297173 -82141307 - AluSx SINE Alu -5 307 1 181 286 0 0 chr17 3297990 3298032 -82140448 + L2 LINE L2 3272 3313 0 288 380 39 8 chr17 3298797 3298926 -82139554 - L2 LINE L2 0 3272 3140 926 251 25 4 chr17 3299320 3299599 -82138881 + L1MC4 LINE L1 7460 7744 -298 2105 119 0 3 chr17 3299605 3299900 -82138580 - AluSx SINE Alu -18 294 1 1036 96 0 7 chr17 3299900 3300036 -82138444 - AluSq/x SINE Alu -178 135 1 2502 52 0 3 chr17 3300067 3300374 -82138106 + AluY SINE Alu 1 306 -5 528 177 3 9 chr17 3300374 3300498 -82137982 + L1MC4 LINE L1 7670 7785 0 1624 168 45 17 chr17 3300519 3300810 -82137670 - AluJo SINE Alu -13 299 1 185 341 57 23 chr17 3301163 3301251 -82137229 + L2 LINE L2 3168 3258 -14 214 238 0 63 chr17 3301840 3301903 -82136577 - MIR SINE MIR -130 78 20 2419 83 0 0 chr17 3301973 3302285 -82136195 - AluSx SINE Alu 0 312 1 254 316 13 0 chr17 3302792 3302868 -82135612 + G-rich Low_complexity Low_complexity 1 77 0 194 100 0 0 chr17 3302906 3302936 -82135544 - L2 LINE L2 -20 3293 3264 418 270 91 102 chr17 3303007 3303196 -82135284 + L2 LINE L2 2232 2417 -897 191 35 0 35 chr17 3303196 3303225 -82135255 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 418 270 91 102 chr17 3303225 3303409 -82135071 + L2 LINE L2 2417 2601 -713 208 254 12 23 chr17 3303766 3303863 -82134617 + MIR SINE MIR 60 153 -61 231 36 0 0 chr17 3304008 3304036 -82134444 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2256 106 0 0 chr17 3304038 3304341 -82134139 - AluSq SINE Alu -10 303 1 463 312 60 54 chr17 3304462 3305086 -82133394 + L2 LINE L2 2553 3211 -61 535 263 103 4 chr17 3305938 3306170 -82132310 - MER112 DNA MER1_type -1 259 5 387 286 7 57 chr17 3306366 3306506 -82131974 + MIR SINE MIR 56 188 -74 354 262 23 78 chr17 3307063 3307251 -82131229 - MIR3 SINE MIR -67 141 15 578 190 0 0 chr17 3307341 3307441 -82131039 - MIR SINE MIR -52 210 111 267 351 52 22 chr17 3308848 3308982 -82129498 - L3 LINE CR1 -18 1559 1422 190 119 119 0 chr17 3308982 3309024 -82129456 - L3 LINE CR1 -123 1454 1408 339 352 132 20 chr17 3310203 3310507 -82127973 + L3 LINE CR1 1176 1513 -64 2118 111 0 0 chr17 3311587 3311867 -82126613 + AluSx SINE Alu 11 290 -22 219 286 102 20 chr17 3312340 3312438 -82126042 + MIR SINE MIR 32 137 -71 382 311 107 0 chr17 3313121 3313243 -82125237 + L2 LINE L2 3179 3313 0 181 270 63 16 chr17 3313248 3313311 -82125169 - MIR3 SINE MIR -37 171 106 195 279 211 0 chr17 3313516 3313620 -82124860 - MIR SINE MIR -60 148 23 468 333 92 9 chr17 3313627 3313855 -82124625 + MIR SINE MIR 16 262 0 198 0 0 0 chr17 3314141 3314163 -82124317 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 304 78 48 chr17 3315654 3315884 -82122596 + L2 LINE L2 2246 2482 -832 * 280 317 208 5 chr17 3315878 3316080 -82122400 + L2 LINE L2 2817 3059 -213 1300 267 32 32 chr17 3316394 3316829 -82121651 - L2 LINE L2 -13 3300 2866 315 296 26 17 chr17 3316875 3316990 -82121490 - L2 LINE L2 -189 3083 2968 216 351 53 0 chr17 3317088 3317202 -82121278 - L2 LINE L2 -561 2753 2634 21 0 0 0 chr17 3317700 3317721 -82120759 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 3318187 3318209 -82120271 + GC_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr17 3318225 3318254 -82120226 + (CCCCG)n Simple_repeat Simple_repeat 4 32 0 30 77 0 0 chr17 3318284 3318349 -82120131 + GC_rich Low_complexity Low_complexity 1 65 0 529 341 38 8 chr17 3318975 3319239 -82119241 + L2 LINE L2 2442 2713 -601 545 278 157 39 chr17 3319289 3319570 -82118910 + L2 LINE L2 2957 3270 -2 887 252 44 53 chr17 3319585 3319906 -82118574 - MLT1J LTR MaLR -191 320 3 296 275 110 16 chr17 3319940 3319999 -82118481 - MIR SINE MIR -28 234 182 800 156 0 30 chr17 3319999 3320134 -82118346 + FLAM_C SINE Alu 3 133 0 296 275 110 16 chr17 3320134 3320243 -82118237 - MIR SINE MIR -80 182 42 316 367 43 31 chr17 3320263 3320587 -82117893 - L2 LINE L2 -1266 2048 1721 781 166 52 140 chr17 3320817 3320891 -82117589 - MER3 DNA MER1_type 0 209 130 2127 83 0 28 chr17 3320891 3321181 -82117299 + AluSx SINE Alu 11 292 -20 781 166 52 140 chr17 3321181 3321335 -82117145 - MER3 DNA MER1_type -79 130 1 299 273 26 0 chr17 3321715 3321792 -82116688 - MIR3 SINE MIR -22 186 108 455 305 43 7 chr17 3322333 3322474 -82116006 - MER5A DNA MER1_type -6 183 38 919 241 50 0 chr17 3322499 3322698 -82115782 + MER3 DNA MER1_type 1 209 0 885 196 25 6 chr17 3324431 3324594 -82113886 - FRAM SINE Alu 0 166 1 2227 99 3 0 chr17 3325046 3325348 -82113132 + AluSx SINE Alu 1 303 -9 2179 120 0 3 chr17 3325398 3325706 -82112774 + AluSx SINE Alu 1 307 -5 360 339 83 32 chr17 3325872 3326090 -82112390 + L2 LINE L2 3084 3312 -1 2448 67 0 0 chr17 3326294 3326594 -82111886 - AluY SINE Alu -11 300 1 633 230 14 0 chr17 3326700 3326848 -82111632 + MER58B DNA MER1_type 190 339 -2 551 360 5 5 chr17 3327042 3327245 -82111235 - MIR SINE MIR -24 238 36 1141 119 11 17 chr17 3327343 3327520 -82110960 - AluSg/x SINE Alu -3 309 134 2139 106 7 7 chr17 3327520 3327823 -82110657 - AluSx SINE Alu -9 303 1 2216 116 0 3 chr17 3327825 3328136 -82110344 - AluSx SINE Alu -2 310 1 2169 95 3 0 chr17 3330820 3331105 -82107375 + AluSq SINE Alu 28 313 0 806 271 50 39 chr17 3331213 3331364 -82107116 + MIR SINE MIR 2 159 -103 2224 82 0 7 chr17 3331364 3331658 -82106822 - AluSc SINE Alu -17 292 1 806 271 50 39 chr17 3331658 3331764 -82106716 + MIR SINE MIR 159 262 0 1692 240 52 26 chr17 3331978 3332436 -82106044 + MLT1K LTR MaLR 4 473 -3 342 0 0 0 chr17 3332518 3332556 -82105924 + (TG)n Simple_repeat Simple_repeat 2 39 0 2133 104 10 10 chr17 3333506 3333814 -82104666 + AluSq SINE Alu 1 308 -5 382 320 51 13 chr17 3334020 3334179 -82104301 + MIR SINE MIR 21 190 -61 2236 82 0 3 chr17 3334263 3334557 -82103923 - AluSg SINE Alu -17 293 1 837 136 8 0 chr17 3334792 3334924 -82103556 + AluJb SINE Alu 1 133 -179 245 317 19 10 chr17 3334926 3335030 -82103450 - L2 LINE L2 -12 3301 3197 292 207 0 0 chr17 3335030 3335088 -82103392 - Tigger5 DNA MER2_type 0 2323 2266 238 171 0 0 chr17 3335154 3335195 -82103285 - Tigger5 DNA MER2_type 0 2323 2283 2409 81 0 0 chr17 3335195 3335502 -82102978 - AluSx SINE Alu -5 307 1 219 374 53 16 chr17 3335546 3335733 -82102747 + L2 LINE L2 2334 2527 -787 528 216 0 26 chr17 3336035 3336151 -82102329 + L2 LINE L2 3199 3311 -2 346 309 24 48 chr17 3336185 3336198 -82102282 + Charlie8 DNA MER1_type 69 81 -260 1740 177 0 16 chr17 3336198 3336515 -82101965 - AluJb SINE Alu 0 312 1 222 37 0 0 chr17 3336519 3336546 -82101934 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 346 309 24 48 chr17 3336546 3336695 -82101785 + Charlie8 DNA MER1_type 84 232 -109 1180 249 3 21 chr17 3337070 3337359 -82101121 + MLT1K LTR MaLR 142 425 -163 2381 93 0 0 chr17 3337546 3337858 -82100622 - AluSx SINE Alu 0 312 1 215 88 0 0 chr17 3338253 3338287 -82100193 + L2 LINE L2 3025 3058 -214 191 294 0 0 chr17 3338290 3338341 -82100139 - L3 LINE CR1 -111 1466 1416 2126 101 20 3 chr17 3338358 3338654 -82099826 - AluSx SINE Alu -11 301 1 245 232 29 14 chr17 3339417 3339486 -82098994 + MIR SINE MIR 29 98 -164 205 121 0 0 chr17 3339576 3339609 -82098871 + L3 LINE CR1 1423 1455 -122 364 272 18 9 chr17 3339943 3340057 -82098423 + MIR3 SINE MIR 15 129 -79 386 184 53 35 chr17 3342288 3342402 -82096078 + MIR SINE MIR 37 152 -110 340 244 106 32 chr17 3342584 3342707 -82095773 - MIR3 SINE MIR -21 187 56 354 146 11 34 chr17 3343218 3343307 -82095173 + GA-rich Low_complexity Low_complexity 1 87 0 846 99 10 48 chr17 3343314 3343616 -82094864 + (GGGA)n Simple_repeat Simple_repeat 1 290 0 417 39 0 0 chr17 3343652 3343703 -82094777 + (TCC)n Simple_repeat Simple_repeat 1 51 0 407 229 48 9 chr17 3344136 3344241 -82094239 - MIR SINE MIR -79 183 75 1782 169 0 43 chr17 3344939 3345083 -82093397 + AluJb SINE Alu 1 150 -162 1731 153 3 3 chr17 3345083 3345394 -82093086 + AluSq SINE Alu 4 314 0 1782 169 0 43 chr17 3345394 3345574 -82092906 + AluJb SINE Alu 150 312 0 2383 87 0 3 chr17 3345732 3346080 -82092400 - AluSg SINE Alu 0 347 1 307 250 0 22 chr17 3346092 3346112 -82092368 - L1MA10 LINE L1 0 6334 6315 674 314 98 15 chr17 3346112 3346437 -82092043 - L1ME1 LINE L1 -9 6157 5806 194 246 0 49 chr17 3346981 3347042 -82091438 + MIR SINE MIR 88 145 -63 239 319 0 0 chr17 3347267 3347336 -82091144 + MER45A DNA AcHobo 5 73 -105 247 286 0 0 chr17 3347525 3347588 -82090892 - L1ME3 LINE L1 -7 6155 6093 2359 92 0 0 chr17 3347592 3347897 -82090583 - AluSx SINE Alu -7 305 1 382 202 61 0 chr17 3347903 3348002 -82090478 + MER45A DNA AcHobo 74 178 0 1705 122 54 14 chr17 3348483 3348787 -82089693 + AluSx SINE Alu 1 312 0 2148 90 4 0 chr17 3351818 3352096 -82086384 - AluSx SINE Alu -33 279 1 252 199 14 96 chr17 3355379 3355525 -82082955 + (CCCCAG)n Simple_repeat Simple_repeat 1 134 0 2183 80 28 0 chr17 3356093 3356382 -82082098 + AluSx SINE Alu 1 297 -15 2588 46 0 0 chr17 3356742 3357048 -82081432 - AluY SINE Alu -5 306 1 2073 110 0 0 chr17 3357345 3357671 -82080809 - AluSx SINE Alu 0 326 1 1754 169 0 3 chr17 3357671 3357961 -82080519 - AluJb SINE Alu -17 295 7 2346 50 4 0 chr17 3358227 3358529 -82079951 + AluSx SINE Alu 1 303 0 2241 90 3 0 chr17 3358685 3358984 -82079496 + AluY SINE Alu 3 302 -9 2320 89 0 0 chr17 3359140 3359444 -82079036 - AluSx SINE Alu -1 311 8 1594 176 53 7 chr17 3359454 3359738 -82078742 - AluJb SINE Alu -15 297 1 2221 106 3 0 chr17 3359747 3360050 -82078430 - AluSx SINE Alu -8 304 1 462 228 139 15 chr17 3360554 3360756 -82077724 + MLT1K LTR MaLR 30 256 -332 2330 76 0 0 chr17 3360763 3361054 -82077426 - AluSx SINE Alu -10 302 12 664 133 20 0 chr17 3361054 3361152 -82077328 - AluS SINE Alu -213 100 1 236 277 38 107 chr17 3361152 3361311 -82077169 + MLT1K LTR MaLR 249 396 -192 339 25 0 0 chr17 3361949 3361989 -82076491 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 269 32 11 chr17 3362232 3362325 -82076155 + (CA)n Simple_repeat Simple_repeat 1 95 0 205 370 11 0 chr17 3363108 3363200 -82075280 + G-rich Low_complexity Low_complexity 3 95 0 2136 108 0 0 chr17 3363379 3363667 -82074813 + AluSx SINE Alu 1 288 -24 2099 110 31 0 chr17 3363774 3364064 -82074416 - AluSx SINE Alu -13 299 1 1889 165 3 0 chr17 3364113 3364410 -82074070 + AluJo SINE Alu 1 298 -14 798 233 75 43 chr17 3364634 3364734 -82073746 + L1ME2 LINE L1 5724 5819 -345 2440 69 0 7 chr17 3364734 3365040 -82073440 + AluSc SINE Alu 1 304 -5 798 233 75 43 chr17 3365040 3365261 -82073219 + L1ME2 LINE L1 5819 6055 -109 213 65 0 0 chr17 3365261 3365292 -82073188 + (T)n Simple_repeat Simple_repeat 1 31 0 665 106 0 0 chr17 3365302 3365387 -82073093 - AluJ/FLAM SINE Alu -226 86 2 383 286 0 0 chr17 3365394 3365499 -82072981 + L1ME2 LINE L1 6050 6154 -10 2217 106 0 0 chr17 3365734 3366035 -82072445 - AluSx SINE Alu -11 301 1 1778 116 64 4 chr17 3368233 3368534 -82069946 + AluSx SINE Alu 1 317 0 504 350 86 0 chr17 3369188 3369491 -82068989 + L2 LINE L2 2439 2767 -547 25 65 0 0 chr17 3370221 3370267 -82068213 + GC_rich Low_complexity Low_complexity 1 46 0 224 255 255 20 chr17 3370657 3370759 -82067721 + MIR SINE MIR 20 145 -63 270 229 55 73 chr17 3370895 3371004 -82067476 - L3 LINE CR1 -101 1476 1370 2213 88 14 7 chr17 3371193 3371489 -82066991 + AluSc SINE Alu 1 298 -11 2030 107 3 27 chr17 3371497 3371797 -82066683 + AluSx SINE Alu 1 293 -19 437 313 78 6 chr17 3373169 3373348 -82065132 + L2 LINE L2 3094 3285 -28 908 142 15 0 chr17 3373812 3373946 -82064534 - AluJo SINE Alu -176 136 1 2329 98 3 0 chr17 3374074 3374381 -82064099 + AluSx SINE Alu 1 308 -4 871 205 35 57 chr17 3374798 3375027 -82063453 + MIR SINE MIR 39 262 0 1887 131 0 0 chr17 3375107 3375374 -82063106 + AluSq SINE Alu 1 267 -46 2263 70 0 7 chr17 3375390 3375675 -82062805 - AluSq SINE Alu -14 299 17 825 124 0 8 chr17 3376291 3376459 -82062021 + AluSg/x SINE Alu 175 312 0 753 152 42 55 chr17 3377184 3377323 -82061157 + MER5A DNA MER1_type 8 146 -43 1846 98 58 4 chr17 3377323 3377597 -82060883 - AluSx SINE Alu -23 289 1 753 152 42 55 chr17 3377597 3377622 -82060858 + MER5A DNA MER1_type 146 170 -19 956 187 36 67 chr17 3377761 3377821 -82060659 + MER20 DNA MER1_type 1 61 -158 1834 161 0 7 chr17 3377821 3378119 -82060361 - AluJo SINE Alu -16 296 1 956 187 36 67 chr17 3378119 3378283 -82060197 + MER20 DNA MER1_type 61 218 -1 274 242 30 106 chr17 3379174 3379306 -82059174 - MIR3 SINE MIR -10 198 77 2373 61 10 0 chr17 3379725 3380021 -82058459 - AluSg SINE Alu -11 299 1 226 344 23 42 chr17 3380040 3380269 -82058211 - MIR SINE MIR -8 254 30 216 310 56 0 chr17 3380338 3380409 -82058071 + MER5A DNA MER1_type 9 83 -106 2232 81 0 0 chr17 3381097 3381409 -82057071 - AluSx SINE Alu 0 312 1 366 184 11 35 chr17 3381489 3381576 -82056904 + MLT1I LTR MaLR 3 87 -322 553 247 117 7 chr17 3381651 3381805 -82056675 + MER3 DNA MER1_type 4 127 -82 494 286 47 52 chr17 3381816 3382029 -82056451 + MLT1I LTR MaLR 197 408 -1 598 290 65 9 chr17 3382368 3382582 -82055898 - MIR SINE MIR -30 232 7 693 288 64 0 chr17 3383290 3383509 -82054971 + MIR SINE MIR 8 240 -22 400 221 106 35 chr17 3383529 3383642 -82054838 + L2 LINE L2 3191 3311 -2 257 370 31 0 chr17 3383640 3383767 -82054713 + L2 LINE L2 2715 2845 -469 * 367 148 0 0 chr17 3383835 3383896 -82054584 - L1MA7 LINE L1 -3 6288 6228 416 230 29 10 chr17 3383923 3384027 -82054453 - L1MC4 LINE L1 -1339 6983 1996 382 246 0 26 chr17 3384006 3384121 -82054359 - L1MC4 LINE L1 -1339 6983 1995 * 320 259 25 25 chr17 3384051 3384126 -82054354 + L1MC3 LINE L1 6571 6646 -1134 * 2009 113 3 27 chr17 3384126 3384426 -82054054 - AluSx SINE Alu -19 293 1 340 367 136 0 chr17 3385844 3386108 -82052372 + L1MC/D LINE L1 5366 5665 -2143 506 337 16 11 chr17 3386993 3387177 -82051303 - MIR SINE MIR -55 207 23 253 260 0 14 chr17 3387429 3387502 -82050978 - MIR SINE MIR -122 140 69 * 945 243 20 0 chr17 3387473 3387675 -82050805 + MIR SINE MIR 57 262 0 39 22 0 0 chr17 3389351 3389397 -82049083 + GC_rich Low_complexity Low_complexity 1 46 0 26 50 0 0 chr17 3389585 3389625 -82048855 + GC_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr17 3389662 3389687 -82048793 + GC_rich Low_complexity Low_complexity 1 25 0 33 0 0 0 chr17 3389711 3389744 -82048736 + GC_rich Low_complexity Low_complexity 1 33 0 2018 108 3 46 chr17 3391077 3391429 -82047051 - AluSx SINE Alu 0 338 1 1675 149 0 81 chr17 3391432 3391753 -82046727 - AluJb SINE Alu -17 295 1 232 379 47 18 chr17 3391761 3391930 -82046550 - L3 LINE CR1 -818 759 586 1619 83 0 0 chr17 3392634 3392876 -82045604 - AluSg/x SINE Alu 0 322 81 630 139 0 170 chr17 3392877 3393042 -82045438 - AluSq/x SINE Alu -175 137 1 251 347 107 37 chr17 3393155 3393397 -82045083 - L2 LINE L2 -429 2885 2627 255 198 176 11 chr17 3393489 3393580 -82044900 - MIR SINE MIR -18 244 139 761 190 0 7 chr17 3393646 3393783 -82044697 - FLAM_A SINE Alu -6 136 1 4030 195 34 35 chr17 3393787 3393823 -82044657 + MER45B DNA AcHobo 67 102 -1479 2303 85 0 3 chr17 3393823 3394128 -82044352 - AluSx SINE Alu -8 304 1 4030 195 34 35 chr17 3394128 3394889 -82043591 + MER45B DNA AcHobo 102 862 -719 2219 93 0 26 chr17 3394889 3395199 -82043281 + AluSx SINE Alu 1 302 -10 4030 195 34 35 chr17 3395199 3395302 -82043178 + MER45B DNA AcHobo 862 969 -612 1609 176 3 37 chr17 3395302 3395625 -82042855 - AluJo SINE Alu 0 312 1 4030 195 34 35 chr17 3395625 3395696 -82042784 + MER45B DNA AcHobo 969 1039 -1 274 283 186 18 chr17 3395697 3395810 -82042670 - MIR SINE MIR -116 146 15 192 375 125 23 chr17 3395916 3396132 -82042348 + L2 LINE L2 2569 2806 -508 231 326 23 30 chr17 3396345 3396477 -82042003 - MIR3 SINE MIR -27 181 51 2300 96 0 0 chr17 3396817 3397120 -82041360 + AluSq SINE Alu 1 303 -10 1765 154 33 10 chr17 3397125 3397430 -82041050 + AluJo SINE Alu 1 312 0 244 234 218 16 chr17 3397596 3397720 -82040760 - L2 LINE L2 -188 3084 2936 335 261 85 8 chr17 3399039 3399169 -82039311 + L2 LINE L2 2876 3015 -257 257 380 52 18 chr17 3399884 3400113 -82038367 + L2 LINE L2 2826 3062 -210 230 390 16 24 chr17 3400276 3400399 -82038081 + L2 LINE L2 3191 3312 -1 2202 107 3 10 chr17 3400569 3400742 -82037738 - AluSq SINE Alu -6 307 135 2487 68 0 0 chr17 3400742 3401049 -82037431 - AluY SINE Alu -4 307 1 2202 107 3 10 chr17 3401049 3401184 -82037296 - AluSq SINE Alu -178 135 1 279 284 34 23 chr17 3402890 3402978 -82035502 - MIR SINE MIR -170 92 4 373 286 95 8 chr17 3403177 3403307 -82035173 + MIR SINE MIR 42 181 -60 2241 79 3 13 chr17 3403332 3403637 -82034843 + AluSx SINE Alu 1 302 -10 627 244 78 0 chr17 3404274 3404454 -82034026 + MIR SINE MIR 9 202 -60 585 257 170 61 chr17 3404535 3404912 -82033568 + MLT1L LTR MaLR 122 539 -76 808 230 0 0 chr17 3404913 3405091 -82033389 - AluSg/x SINE Alu -1 311 134 2224 106 0 3 chr17 3405115 3405417 -82033063 + AluSg SINE Alu 1 301 -9 1571 142 0 4 chr17 3405575 3405807 -82032673 - AluJo SINE Alu -81 231 1 538 261 6 24 chr17 3405807 3405972 -82032508 + MLT1K LTR MaLR 421 582 -6 326 276 38 0 chr17 3406864 3406969 -82031511 + MIR3 SINE MIR 85 193 -15 282 29 0 0 chr17 3407394 3407429 -82031051 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 2184 107 0 3 chr17 3407551 3407850 -82030630 - AluSx SINE Alu -14 298 1 2088 93 7 0 chr17 3408775 3409087 -82029393 + AluY SINE Alu 1 314 0 389 282 83 33 chr17 3409298 3409479 -82029001 + MLT1K LTR MaLR 396 585 -3 3673 96 57 0 chr17 3409984 3410144 -82028336 - MER41A LTR ERV1 0 554 405 2236 111 7 0 chr17 3410144 3410451 -82028029 - AluSg SINE Alu -1 309 1 3673 96 57 0 chr17 3410451 3410813 -82027667 - MER41A LTR ERV1 -149 405 2 2256 96 3 0 chr17 3411039 3411342 -82027138 - AluSp SINE Alu -9 304 1 199 293 81 20 chr17 3414323 3414422 -82024058 + L3 LINE CR1 1151 1255 -322 638 183 82 127 chr17 3416142 3416664 -82021816 + Charlie1 DNA MER1_type 5 2749 -12 367 276 82 18 chr17 3417241 3417411 -82021069 + MIR3 SINE MIR 23 203 -5 1036 174 38 136 chr17 3418187 3418503 -82019977 + AluY SINE Alu 11 295 -16 2214 104 0 19 chr17 3418574 3418890 -82019590 + AluSg SINE Alu 1 310 0 927 192 6 24 chr17 3419080 3419247 -82019233 + FRAM SINE Alu 3 166 0 1771 166 0 7 chr17 3419255 3419550 -82018930 + AluJb SINE Alu 1 293 -19 568 276 165 11 chr17 3420586 3421028 -82017452 + L1ME4a LINE L1 4061 4570 -1576 490 133 0 0 chr17 3421028 3421103 -82017377 + AluJ/FRAM SINE Alu 226 300 -12 530 309 76 12 chr17 3421107 3421437 -82017043 + L1ME4a LINE L1 4918 5268 -878 207 348 0 14 chr17 3422443 3422512 -82015968 - MIR SINE MIR -125 83 16 411 209 23 0 chr17 3422836 3422922 -82015558 - L2 LINE L2 -8 3264 3177 2519 38 0 0 chr17 3425232 3425523 -82012957 + AluY SINE Alu 1 291 -20 563 242 242 15 chr17 3425745 3425943 -82012537 - MIR SINE MIR -6 256 14 1090 168 89 5 chr17 3426258 3426460 -82012020 - AluJo SINE Alu -1 311 93 243 326 141 44 chr17 3427405 3427767 -82010713 - L2 LINE L2 -10 3262 2866 2175 93 3 0 chr17 3428333 3428622 -82009858 + AluSx SINE Alu 1 290 -22 194 229 16 49 chr17 3429002 3429063 -82009417 + L3 LINE CR1 1344 1402 -175 36 53 0 0 chr17 3431067 3431124 -82007356 + AT_rich Low_complexity Low_complexity 1 57 0 732 159 0 51 chr17 3431124 3431262 -82007218 - FLAM_A SINE Alu -1 132 2 1229 153 55 0 chr17 3431285 3431521 -82006959 - MER57A LTR ERV1 -25 378 130 272 239 50 107 chr17 3431753 3431846 -82006634 + MLT1J LTR MaLR 276 373 -138 5593 50 7 29 chr17 3431846 3432573 -82005907 - SVA Other Other 0 1386 676 272 239 50 107 chr17 3432573 3432668 -82005812 + MLT1J LTR MaLR 373 511 0 503 132 0 0 chr17 3433716 3433792 -82004688 - AluJo SINE Alu -11 301 226 1380 151 27 0 chr17 3434005 3434224 -82004256 - AluJo SINE Alu -87 225 1 266 287 20 10 chr17 3435137 3435238 -82003242 + L1ME4a LINE L1 5544 5645 -476 357 329 59 26 chr17 3435419 3435571 -82002909 + L1ME4a LINE L1 5935 6091 -30 248 305 124 11 chr17 3435573 3435750 -82002730 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3436491 3436523 -82001957 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 286 329 117 21 chr17 3436549 3436858 -82001622 + L2 LINE L2 2717 3056 -257 318 306 124 8 chr17 3436888 3437009 -82001471 + L2 LINE L2 3136 3270 -2 1468 187 0 39 chr17 3437125 3437430 -82001050 + AluJo SINE Alu 1 293 -19 36 53 0 0 chr17 3439440 3439497 -81998983 + AT_rich Low_complexity Low_complexity 1 57 0 705 159 0 51 chr17 3439497 3439635 -81998845 - FLAM_A SINE Alu -1 132 2 1366 153 55 0 chr17 3439658 3439894 -81998586 - MER57A LTR ERV1 -25 378 130 423 274 189 31 chr17 3439916 3440303 -81998177 + MLT1J LTR MaLR 64 511 0 492 132 0 0 chr17 3441351 3441427 -81997053 - AluJo SINE Alu -11 301 226 1325 151 27 0 chr17 3441640 3441859 -81996621 - AluJo SINE Alu -87 225 1 266 287 20 10 chr17 3442772 3442873 -81995607 + L1ME4a LINE L1 5544 5645 -476 316 286 60 53 chr17 3443054 3443187 -81995293 + L1ME4a LINE L1 5935 6068 -53 263 299 124 11 chr17 3443208 3443385 -81995095 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3444126 3444158 -81994322 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 286 329 117 21 chr17 3444184 3444493 -81993987 + L2 LINE L2 2717 3056 -257 318 306 124 8 chr17 3444523 3444644 -81993836 + L2 LINE L2 3136 3270 -2 1451 190 0 39 chr17 3444760 3445065 -81993415 + AluJo SINE Alu 1 293 -19 2094 126 0 3 chr17 3445409 3445719 -81992761 - AluSx SINE Alu -3 309 1 2051 126 17 0 chr17 3446625 3446919 -81991561 + AluSx SINE Alu 1 299 -13 1624 254 44 45 chr17 3446931 3447458 -81991022 + L1MEc LINE L1 35 560 -5836 756 273 89 61 chr17 3447481 3447733 -81990747 + L1MEc LINE L1 1277 1520 -4876 2114 111 7 3 chr17 3447733 3448040 -81990440 - AluSq SINE Alu -5 308 1 756 273 89 61 chr17 3448040 3448347 -81990133 + L1MEc LINE L1 1520 1852 -4544 539 172 35 52 chr17 3448381 3448497 -81989983 - FLAM_C SINE Alu -18 115 2 2285 91 3 0 chr17 3448507 3448815 -81989665 - AluSq SINE Alu -4 309 1 1296 144 12 37 chr17 3448815 3449058 -81989422 - AluJo SINE Alu -10 302 66 502 202 0 40 chr17 3449076 3449175 -81989305 - FLAM_C SINE Alu -19 124 30 277 172 129 32 chr17 3449186 3449279 -81989201 - L1MEc LINE L1 -4258 2138 2037 732 212 109 0 chr17 3449285 3449478 -81989002 - L1MEc LINE L1 -4320 2076 1863 1892 133 7 7 chr17 3449487 3449787 -81988693 + AluSx SINE Alu 1 300 -12 621 150 150 33 chr17 3449790 3449943 -81988537 + L1MEc LINE L1 2229 2399 -3997 426 218 51 0 chr17 3450029 3450107 -81988373 - MER2 DNA MER2_type -262 83 2 1692 234 10 103 chr17 3450110 3450837 -81987643 + L1MEc LINE L1 2367 3160 -3055 2129 90 7 0 chr17 3450837 3451125 -81987355 + AluSq SINE Alu 22 311 -2 1692 234 10 103 chr17 3451125 3451136 -81987344 + L1MEc LINE L1 3160 3170 -3045 794 178 23 0 chr17 3451136 3451265 -81987215 + FLAM_C SINE Alu 2 133 0 1692 234 10 103 chr17 3451265 3451486 -81986994 + L1MEc LINE L1 3170 3362 -2853 270 157 0 39 chr17 3451594 3451645 -81986835 + Tigger5 DNA MER2_type 7 55 -2268 * 374 173 13 40 chr17 3451612 3451687 -81986793 + Tigger5 DNA MER2_type 2251 2323 0 304 111 0 0 chr17 3451704 3451749 -81986731 + L1ME3A LINE L1 4564 4608 -1538 734 136 183 8 chr17 3451762 3451955 -81986525 - AluJo SINE Alu -24 288 2 419 214 103 0 chr17 3451999 3452116 -81986364 + L1ME3A LINE L1 4633 4761 -1385 990 107 0 0 chr17 3452117 3452248 -81986232 + AluSq/x SINE Alu 1 131 -182 2030 119 0 3 chr17 3452253 3452586 -81985894 + AluSx SINE Alu 1 332 0 741 220 62 5 chr17 3452587 3452796 -81985684 + L1ME3A LINE L1 4752 4972 -1174 2157 112 0 10 chr17 3454567 3454880 -81983600 - AluSg SINE Alu 0 310 1 260 209 80 92 chr17 3455779 3455942 -81982538 - L1ME4a LINE L1 -27 6094 5934 1913 141 0 7 chr17 3455946 3456243 -81982237 + AluJb SINE Alu 1 295 -17 186 191 0 0 chr17 3456244 3456286 -81982194 + (TATG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr17 3456289 3456314 -81982166 + AT_rich Low_complexity Low_complexity 1 25 0 301 252 144 50 chr17 3456447 3456586 -81981894 + HAL1 LINE L1 928 1079 -1428 1811 89 0 0 chr17 3457070 3457306 -81981174 + AluSq SINE Alu 23 258 -55 246 279 0 0 chr17 3457383 3457444 -81981036 + L1MC4 LINE L1 6460 6520 -1522 630 215 59 59 chr17 3457459 3457678 -81980802 - MER20 DNA MER1_type 0 219 1 2212 81 13 0 chr17 3457684 3457982 -81980498 + AluSq SINE Alu 1 302 -11 234 0 0 0 chr17 3458009 3458035 -81980445 + (CA)n Simple_repeat Simple_repeat 2 27 0 1254 200 216 0 chr17 3458073 3458378 -81980102 + L1MC4 LINE L1 6719 7089 -953 2065 234 55 26 chr17 3458379 3458781 -81979699 + L1MC4 LINE L1 7243 7671 -371 1615 194 10 3 chr17 3458781 3459090 -81979390 - AluJo SINE Alu -1 311 1 2065 234 55 26 chr17 3459090 3459303 -81979177 + L1MC4 LINE L1 7671 7876 -166 899 249 89 59 chr17 3459361 3459730 -81978750 + L1ME3A LINE L1 5492 5880 -290 1953 106 7 3 chr17 3459730 3460041 -81978439 + AluSx SINE Alu 1 312 0 899 249 89 59 chr17 3460041 3460134 -81978346 + L1ME3A LINE L1 5880 5969 -201 286 50 0 0 chr17 3460131 3460171 -81978309 - L1M4 LINE L1 -843 5303 5264 * 1781 132 7 7 chr17 3460387 3460700 -81977780 + AluSx SINE Alu 1 313 0 2496 46 0 3 chr17 3460845 3461148 -81977332 - AluY SINE Alu -9 302 1 305 357 124 16 chr17 3461208 3461393 -81977087 + HAL1b LINE L1 310 514 -834 382 292 51 45 chr17 3462779 3462957 -81975523 + L1M4 LINE L1 4530 4708 -1438 686 229 171 28 chr17 3462978 3463405 -81975075 + L1MC4 LINE L1 7555 8042 0 2252 88 0 10 chr17 3463879 3464186 -81974294 - AluSx SINE Alu -8 304 1 530 254 131 60 chr17 3464218 3464501 -81973979 + L2 LINE L2 3010 3312 -1 528 306 67 67 chr17 3464868 3465224 -81973256 + L2 LINE L2 2898 3253 -19 2216 110 0 0 chr17 3465713 3466021 -81972459 - AluSc SINE Alu -1 308 1 2163 96 3 0 chr17 3466076 3466367 -81972113 + AluSx SINE Alu 1 292 -20 2313 97 0 0 chr17 3467397 3467707 -81970773 - AluY SINE Alu -1 310 1 986 209 18 65 chr17 3468752 3468943 -81969537 + L1MC4 LINE L1 6820 7018 -1024 1780 166 7 0 chr17 3468943 3469239 -81969241 + AluJb SINE Alu 1 298 -14 2113 108 3 0 chr17 3469241 3469537 -81968943 + AluY SINE Alu 1 297 -14 986 209 18 65 chr17 3469537 3469620 -81968860 + L1MC4 LINE L1 7019 7084 -958 1787 94 50 43 chr17 3470293 3470592 -81967888 - AluSg SINE Alu -9 301 1 758 188 108 84 chr17 3470665 3470810 -81967670 - MIR SINE MIR -5 257 101 1816 136 7 4 chr17 3470810 3471119 -81967361 + AluJb SINE Alu 1 310 0 758 188 108 84 chr17 3471119 3471222 -81967258 - MIR SINE MIR -161 101 2 22 0 0 0 chr17 3472107 3472129 -81966351 + AT_rich Low_complexity Low_complexity 1 22 0 308 261 28 115 chr17 3472879 3473008 -81965472 + L1MC5 LINE L1 7651 7743 -218 2056 97 17 0 chr17 3473008 3473296 -81965184 - AluSx SINE Alu -19 293 1 308 261 28 115 chr17 3473296 3473453 -81965027 + L1MC5 LINE L1 7743 7912 -49 34 0 0 0 chr17 3474130 3474164 -81964316 + AT_rich Low_complexity Low_complexity 1 34 0 1847 153 0 0 chr17 3474165 3474447 -81964033 + AluSx SINE Alu 1 282 -30 356 379 73 24 chr17 3475847 3476256 -81962224 - L2 LINE L2 -18 3254 2826 261 380 120 12 chr17 3476303 3476627 -81961853 - L2 LINE L2 -575 2739 2381 220 231 77 0 chr17 3476910 3476962 -81961518 + L2 LINE L2 3258 3313 0 1551 142 46 4 chr17 3477379 3477639 -81960841 - MER1B DNA MER1_type 0 339 69 228 217 0 0 chr17 3478188 3478234 -81960246 - L2 LINE L2 -5 3308 3263 234 0 0 0 chr17 3478248 3478274 -81960206 + (TTA)n Simple_repeat Simple_repeat 2 27 0 244 231 92 15 chr17 3478314 3478379 -81960101 + MIR SINE MIR 25 94 -114 305 200 0 57 chr17 3478385 3478455 -81960025 - 5S rRNA rRNA -53 68 3 981 227 28 24 chr17 3479272 3479519 -81958961 - MIR SINE MIR -7 255 8 1656 182 7 3 chr17 3480173 3480470 -81958010 + AluJb SINE Alu 1 298 -14 573 192 90 30 chr17 3480544 3480711 -81957769 + L1ME4a LINE L1 5944 6120 -1 237 281 0 0 chr17 3481146 3481203 -81957277 - MIR SINE MIR -33 229 173 3598 282 143 45 chr17 3481212 3481863 -81956617 + L2 LINE L2 602 1188 -2125 1648 153 54 3 chr17 3481863 3482158 -81956322 + AluSx SINE Alu 1 310 -2 3598 282 143 45 chr17 3482158 3483987 -81954493 + L2 LINE L2 1188 3309 -4 188 291 0 0 chr17 3483955 3484010 -81954470 - MIR SINE MIR -48 214 160 * 493 231 130 0 chr17 3484889 3484997 -81953483 + FLAM_C SINE Alu 2 123 -20 280 125 42 0 chr17 3485146 3485194 -81953286 - Alu SINE Alu -4 298 249 1476 164 6 68 chr17 3485148 3485309 -81953171 - AluJb SINE Alu -16 296 162 2197 107 0 0 chr17 3485309 3485608 -81952872 - AluSx SINE Alu -13 299 1 1476 164 6 68 chr17 3485608 3485757 -81952723 - AluJb SINE Alu -150 162 5 1230 63 25 0 chr17 3486455 3486614 -81951866 + L1PA5 LINE L1 5989 6151 -3 1705 147 33 16 chr17 3486702 3487009 -81951471 + AluJb SINE Alu 1 312 0 673 226 96 26 chr17 3487135 3487405 -81951075 - L1MC5 LINE L1 -54 7907 7619 1624 137 0 113 chr17 3487429 3487764 -81950716 + AluJo SINE Alu 1 297 -5 238 318 124 31 chr17 3488286 3488415 -81950065 - MIR3 SINE MIR -14 194 54 24 77 0 0 chr17 3489077 3489129 -81949351 + AT_rich Low_complexity Low_complexity 1 52 0 281 212 47 0 chr17 3489139 3489224 -81949256 + L1ME4a LINE L1 5831 5919 -202 242 231 0 0 chr17 3489257 3489296 -81949184 + AluJo SINE Alu 2 40 -259 580 131 0 47 chr17 3489299 3489406 -81949074 - AluJo/FRAM SINE Alu -2 310 209 1517 182 14 0 chr17 3489406 3489681 -81948799 + AluJo SINE Alu 27 305 -7 366 279 161 0 chr17 3489705 3489866 -81948614 + L1ME4a LINE L1 5935 6121 0 1989 104 7 33 chr17 3489869 3490168 -81948312 - AluSq SINE Alu -22 291 1 362 316 43 0 chr17 3490282 3490399 -81948081 - L2 LINE L2 -8 3305 3184 2207 98 3 0 chr17 3491130 3491437 -81947043 + AluSx SINE Alu 1 308 -4 357 300 161 0 chr17 3491846 3491976 -81946504 - MIR3 SINE MIR -11 197 47 24 0 0 0 chr17 3492165 3492189 -81946291 + AT_rich Low_complexity Low_complexity 1 24 0 221 333 15 0 chr17 3492803 3492869 -81945611 - L2 LINE L2 -217 3055 2989 306 350 14 0 chr17 3492939 3493079 -81945401 - L2 LINE L2 -457 2857 2716 247 295 122 51 chr17 3493977 3494133 -81944347 - L2 LINE L2 -2 3270 3104 1705 161 0 29 chr17 3495010 3495320 -81943160 - AluJo SINE Alu -11 301 1 567 195 88 0 chr17 3496408 3496521 -81941959 - MER58A DNA MER1_type 0 160 38 2337 43 3 13 chr17 3497714 3498015 -81940465 - AluY SINE Alu -13 298 1 1894 137 0 29 chr17 3498036 3498351 -81940129 - AluSx SINE Alu -6 306 1 445 238 32 56 chr17 3498351 3498477 -81940003 + MER5B DNA MER1_type 5 127 -51 193 335 129 13 chr17 3501696 3501851 -81936629 - MIR SINE MIR -70 192 20 1004 182 9 40 chr17 3503112 3503337 -81935143 - AluJo SINE Alu -94 218 1 203 146 24 0 chr17 3503584 3503625 -81934855 + CT-rich Low_complexity Low_complexity 3 44 0 1134 101 24 0 chr17 3504541 3504709 -81933771 + AluSc SINE Alu 132 303 -6 237 273 114 45 chr17 3504709 3504841 -81933639 - MER112 DNA MER1_type -115 145 5 294 234 183 15 chr17 3505055 3505192 -81933288 + L3 LINE CR1 1346 1505 -72 1781 155 7 0 chr17 3505210 3505500 -81932980 - AluSx SINE Alu -19 293 2 581 265 155 0 chr17 3505927 3506127 -81932353 + MIR SINE MIR 6 236 -26 334 308 67 10 chr17 3506197 3506301 -81932179 + L2 LINE L2 3123 3232 -40 1602 181 0 37 chr17 3506534 3506855 -81931625 + AluSx SINE Alu 1 309 -3 1468 174 31 14 chr17 3506870 3507163 -81931317 - AluJo SINE Alu -14 298 1 678 215 117 27 chr17 3507236 3507459 -81931021 + L1MC5 LINE L1 7688 7930 -31 * 1809 254 53 30 chr17 3507457 3507994 -81930486 + L1PA14 LINE L1 405 928 -5226 1937 83 12 0 chr17 3507994 3508246 -81930234 - AluSc SINE Alu -54 255 1 541 156 37 18 chr17 3508255 3508364 -81930116 - L1MB7 LINE L1 0 6184 6074 1809 254 53 30 chr17 3508364 3508696 -81929784 + L1PA14 LINE L1 935 5780 -374 1579 107 0 0 chr17 3508736 3508952 -81929528 + AluSg SINE Alu 1 216 -94 2509 92 51 0 chr17 3508969 3509340 -81929140 + L1PA14 LINE L1 5769 6158 -3 2067 132 3 0 chr17 3509351 3509662 -81928818 + AluSx SINE Alu 1 312 0 2773 234 88 67 chr17 3509662 3510676 -81927804 + HAL1 LINE L1 1060 2107 -400 1870 155 3 3 chr17 3510676 3510979 -81927501 + AluJb SINE Alu 1 303 -9 2773 234 88 67 chr17 3510979 3511211 -81927269 + HAL1 LINE L1 2107 2333 -174 201 220 0 20 chr17 3511501 3511551 -81926929 - L2 LINE L2 -279 2993 2945 181 260 0 20 chr17 3511568 3511618 -81926862 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511635 3511685 -81926795 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511702 3511752 -81926728 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511769 3511819 -81926661 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511836 3511886 -81926594 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511903 3511953 -81926527 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 3511970 3512020 -81926460 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 3512036 3512086 -81926394 - L2 LINE L2 -279 2993 2945 410 0 20 0 chr17 3513911 3513961 -81924519 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 200 20 0 chr17 3513961 3514011 -81924469 + (CATA)n Simple_repeat Simple_repeat 2 52 0 220 289 141 74 chr17 3514514 3514560 -81923920 - MIR3 SINE MIR -62 146 104 2181 97 3 0 chr17 3514560 3514858 -81923622 + AluSg SINE Alu 3 301 -9 220 289 141 74 chr17 3514858 3514946 -81923534 - MIR3 SINE MIR -104 104 3 22 0 0 0 chr17 3515769 3515791 -81922689 + AT_rich Low_complexity Low_complexity 1 22 0 453 209 40 129 chr17 3516366 3516591 -81921889 - L1MC5 LINE L1 -46 7915 7711 1869 147 7 0 chr17 3516605 3516905 -81921575 - AluJb SINE Alu -10 302 1 832 286 96 49 chr17 3517224 3517763 -81920717 + L1M4 LINE L1 3658 4230 -1916 1202 121 0 0 chr17 3517934 3518108 -81920372 + AluSg/x SINE Alu 136 309 -3 2237 89 0 0 chr17 3518661 3518953 -81919527 + AluSq SINE Alu 1 292 -21 362 316 110 30 chr17 3519700 3519937 -81918543 + L3 LINE CR1 961 1216 -361 1764 170 3 3 chr17 3520475 3520781 -81917699 - AluJb SINE Alu -5 307 2 873 91 83 0 chr17 3521047 3521179 -81917301 + AluSp SINE Alu 1 143 -170 25 0 0 0 chr17 3521179 3521204 -81917276 + AT_rich Low_complexity Low_complexity 1 25 0 1307 76 17 0 chr17 3521207 3521413 -81917067 + AluSp SINE Alu 110 318 0 537 350 137 5 chr17 3521640 3522020 -81916460 - L3 LINE CR1 -344 1233 804 414 282 57 13 chr17 3522378 3522566 -81915914 - MIR SINE MIR -31 231 33 1985 105 0 48 chr17 3522692 3523005 -81915475 + AluSq SINE Alu 4 301 -12 285 304 64 59 chr17 3523809 3524013 -81914467 + L2 LINE L2 3086 3290 -23 1072 167 158 92 chr17 3524034 3524113 -81914367 - MER44D DNA MER2_type -1882 609 537 388 46 0 31 chr17 3524113 3524178 -81914302 + (TA)n Simple_repeat Simple_repeat 2 64 0 1072 167 158 92 chr17 3524178 3524227 -81914253 - MER44D DNA MER2_type -1954 537 493 2274 64 3 3 chr17 3524227 3524523 -81913957 + AluY SINE Alu 1 296 -15 1072 167 158 92 chr17 3524523 3524710 -81913770 - MER44D DNA MER2_type -1998 493 2 2201 84 0 19 chr17 3524761 3525069 -81913411 + AluSp SINE Alu 1 302 -11 1680 149 28 3 chr17 3525429 3525718 -81912762 + AluJb SINE Alu 1 296 -16 1903 124 14 7 chr17 3525813 3526103 -81912377 - AluSx SINE Alu -20 292 1 640 211 0 30 chr17 3526648 3526781 -81911699 - FLAM_C SINE Alu -9 134 6 958 137 0 0 chr17 3526893 3527039 -81911441 + MLT2A2 LTR ERVL 308 453 0 3715 122 14 21 chr17 3527039 3527072 -81911408 + HERVL-A2 LTR ERVL 1 33 -5621 2100 104 0 7 chr17 3527072 3527370 -81911110 - AluSg SINE Alu -14 296 1 3715 122 14 21 chr17 3527370 3527912 -81910568 + HERVL-A2 LTR ERVL 33 572 -5082 11022 107 13 0 chr17 3527914 3529391 -81909089 + HERVL LTR ERVL 2125 3620 -2034 231 260 39 77 chr17 3529405 3529509 -81908971 + MIR SINE MIR 113 212 -50 2334 78 0 7 chr17 3529773 3530081 -81908399 - AluSq SINE Alu -7 306 1 337 286 267 34 chr17 3530637 3530903 -81907577 + L2 LINE L2 2985 3312 -1 595 288 55 66 chr17 3530954 3531124 -81907356 + L1M4 LINE L1 4791 4961 -1185 1915 113 29 0 chr17 3531124 3531399 -81907081 - AluSq SINE Alu -22 291 9 595 288 55 66 chr17 3531399 3531683 -81906797 + L1M4 LINE L1 4961 5240 -906 1983 145 0 0 chr17 3531753 3532064 -81906416 - AluSx SINE Alu -1 311 1 215 235 0 86 chr17 3532080 3532118 -81906362 + MIR SINE MIR 186 215 -47 1813 124 10 29 chr17 3532118 3532424 -81906056 + AluJo SINE Alu 1 300 -12 215 235 0 86 chr17 3532424 3532466 -81906014 + MIR SINE MIR 215 259 -3 431 215 21 0 chr17 3532744 3532837 -81905643 - U13 snRNA snRNA -9 95 1 1544 174 27 14 chr17 3533459 3533753 -81904727 - AluJo SINE Alu -14 298 1 1739 124 84 0 chr17 3533764 3534037 -81904443 - AluSg SINE Alu -14 296 1 2134 141 0 0 chr17 3535003 3535302 -81903178 + AluSx SINE Alu 5 303 -9 261 0 0 0 chr17 3535353 3535382 -81903098 + (TA)n Simple_repeat Simple_repeat 2 30 0 1503 94 5 19 chr17 3535516 3535728 -81902752 + AluSq SINE Alu 94 302 -11 23 0 0 0 chr17 3535776 3535799 -81902681 + AT_rich Low_complexity Low_complexity 1 23 0 2279 112 0 22 chr17 3536379 3536693 -81901787 + AluY SINE Alu 1 307 -4 1593 62 5 0 chr17 3536859 3537051 -81901429 + AluSg/x SINE Alu 98 290 -22 2249 93 0 23 chr17 3537181 3537482 -81900998 + AluSc SINE Alu 5 298 -11 285 238 119 0 chr17 3537821 3537905 -81900575 - MIR SINE MIR -76 186 93 1633 164 0 57 chr17 3538321 3538667 -81899813 - AluJo SINE Alu 0 328 1 1839 141 40 13 chr17 3538832 3539131 -81899349 - AluSx SINE Alu -5 307 1 2182 101 6 19 chr17 3539190 3539507 -81898973 - AluSp SINE Alu 0 313 1 642 279 63 31 chr17 3539898 3540145 -81898335 + MIR SINE MIR 3 256 -6 717 251 0 6 chr17 3540400 3540583 -81897897 - MLT1E2-int LTR MaLR -1157 214 33 1572 235 70 16 chr17 3540624 3541050 -81897430 - MLT1E2 LTR MaLR 0 626 158 728 193 28 34 chr17 3541151 3541327 -81897153 - MLT1E2 LTR MaLR -330 175 1 2437 62 0 3 chr17 3542525 3542816 -81895664 - AluY SINE Alu -17 294 5 308 284 124 47 chr17 3543813 3543982 -81894498 + MIR SINE MIR 3 184 -78 2464 84 3 0 chr17 3544436 3544747 -81893733 - AluSp SINE Alu -1 312 1 192 77 0 0 chr17 3545279 3545305 -81893175 + (TA)n Simple_repeat Simple_repeat 2 27 0 2657 40 3 0 chr17 3545561 3545864 -81892616 - AluY SINE Alu -7 304 1 2121 112 7 0 chr17 3545866 3546160 -81892320 - AluSx SINE Alu -16 296 1 216 0 0 0 chr17 3546777 3546801 -81891679 + (A)n Simple_repeat Simple_repeat 1 24 0 1898 164 0 6 chr17 3546948 3547260 -81891220 + AluJb SINE Alu 1 310 -2 2004 133 7 13 chr17 3547917 3548217 -81890263 + AluJb SINE Alu 1 298 -14 1797 163 10 13 chr17 3548789 3549090 -81889390 + AluJb SINE Alu 1 300 -12 1588 153 24 0 chr17 3549115 3549370 -81889110 - AluJo SINE Alu -24 288 28 2087 138 3 13 chr17 3549609 3549921 -81888559 + AluSx SINE Alu 1 309 -3 2254 107 3 0 chr17 3550134 3550433 -81888047 - AluSp SINE Alu -13 300 1 1792 173 3 7 chr17 3551130 3551431 -81887049 - AluJb SINE Alu 0 312 13 297 285 304 0 chr17 3551456 3551726 -81886754 - L3 LINE CR1 -14 1563 1212 432 0 0 0 chr17 3552088 3552136 -81886344 + (TG)n Simple_repeat Simple_repeat 2 49 0 475 189 54 18 chr17 3553533 3553644 -81884836 - Charlie1 DNA MER1_type 0 2761 2647 189 0 0 0 chr17 3553799 3553820 -81884660 + (A)n Simple_repeat Simple_repeat 1 21 0 1944 131 16 16 chr17 3553870 3554175 -81884305 + AluSq SINE Alu 1 305 -8 243 91 0 0 chr17 3554192 3554225 -81884255 + Alu SINE Alu 1 33 -269 2052 108 9 41 chr17 3554227 3554543 -81883937 + AluSx SINE Alu 7 312 0 2409 78 10 3 chr17 3554552 3554859 -81883621 + AluSq SINE Alu 1 309 -4 1008 164 0 0 chr17 3554867 3555026 -81883454 + FRAM SINE Alu 9 167 -9 298 326 70 3 chr17 3555073 3555358 -81883122 - L1M4 LINE L1 -3442 2704 2401 35 0 0 0 chr17 3555380 3555415 -81883065 + AT_rich Low_complexity Low_complexity 1 35 0 720 62 42 0 chr17 3555415 3555511 -81882969 - HY3 scRNA scRNA -1 100 1 2201 112 7 3 chr17 3557121 3557424 -81881056 - AluSx SINE Alu -8 304 1 529 232 106 53 chr17 3557752 3557818 -81880662 + MER20 DNA MER1_type 2 63 -156 2149 132 0 0 chr17 3557818 3558114 -81880366 - AluSx SINE Alu -10 302 7 529 232 106 53 chr17 3558114 3558254 -81880226 + MER20 DNA MER1_type 63 219 0 1273 131 0 0 chr17 3559386 3559562 -81878918 - AluSp SINE Alu -4 309 134 188 296 19 0 chr17 3559780 3559834 -81878646 - MIR SINE MIR -56 152 98 337 249 69 83 chr17 3560162 3560312 -81878168 + L2 LINE L2 1564 1712 -1602 2269 117 0 0 chr17 3560312 3560620 -81877860 + AluSx SINE Alu 2 309 -3 337 249 69 83 chr17 3560620 3560686 -81877794 + L2 LINE L2 1712 1777 -1537 234 254 16 16 chr17 3560781 3560844 -81877636 - L2 LINE L2 -536 2778 2716 1029 141 22 5 chr17 3561082 3561266 -81877214 + L1PB2 LINE L1 5959 6145 -6 217 98 20 39 chr17 3561547 3561598 -81876882 + (GGA)n Simple_repeat Simple_repeat 2 51 0 665 237 63 10 chr17 3561635 3561842 -81876638 + HAL1 LINE L1 2184 2401 -106 571 84 36 0 chr17 3561857 3561940 -81876540 - HY3 scRNA scRNA -2 99 14 26 50 0 0 chr17 3562509 3562549 -81875931 + AT_rich Low_complexity Low_complexity 1 40 0 724 200 0 0 chr17 3562649 3562774 -81875706 + AluJo/FLAM SINE Alu 3 127 -175 2352 88 3 0 chr17 3562776 3563071 -81875409 + AluSg SINE Alu 1 296 -14 2194 110 3 0 chr17 3565160 3565451 -81873029 - AluSq SINE Alu -17 296 5 185 329 58 66 chr17 3566623 3566760 -81871720 + L2 LINE L2 3137 3272 0 2343 65 33 26 chr17 3567490 3567797 -81870683 - AluY SINE Alu -2 309 1 2042 137 0 29 chr17 3567818 3568133 -81870347 - AluSx SINE Alu -6 306 1 448 238 32 56 chr17 3568133 3568259 -81870221 + MER5B DNA MER1_type 5 127 -51 194 351 110 16 chr17 3571441 3571632 -81866848 - MIR SINE MIR -34 228 20 181 305 46 69 chr17 3571725 3571856 -81866624 - L2 LINE L2 -459 2855 2728 2037 168 0 0 chr17 3572918 3573228 -81865252 - AluJb SINE Alu -2 310 1 1574 206 3 19 chr17 3573251 3573561 -81864919 + AluJo SINE Alu 1 305 -7 378 363 142 20 chr17 3573722 3574130 -81864350 - L1MC4a LINE L1 -1876 5932 5475 2503 48 10 0 chr17 3575123 3575418 -81863062 + AluY SINE Alu 1 298 -13 187 274 0 65 chr17 3576271 3576333 -81862147 - MIR SINE MIR -81 181 124 274 276 104 22 chr17 3576683 3576817 -81861663 + MIR SINE MIR 47 191 -71 1760 70 86 150 chr17 3579465 3579792 -81858688 + AluSx SINE Alu 1 306 -6 2060 132 7 3 chr17 3579812 3580108 -81858372 - AluSx SINE Alu -15 297 1 1251 92 92 24 chr17 3584576 3584783 -81853697 - L1PB1 LINE L1 -2 6149 5929 325 286 47 24 chr17 3585354 3585502 -81852978 + MIR SINE MIR 38 183 -52 1497 125 133 26 chr17 3585888 3586152 -81852328 - AluSx SINE Alu -1 311 20 348 308 100 8 chr17 3586976 3587096 -81851384 + L2 LINE L2 3181 3311 -2 2003 128 7 3 chr17 3587395 3587684 -81850796 + AluJb SINE Alu 7 296 -16 292 345 50 66 chr17 3588467 3588768 -81849712 - L2 LINE L2 -45 3227 2932 2087 103 6 91 chr17 3588975 3589315 -81849165 + AluSx SINE Alu 1 311 -1 583 165 105 53 chr17 3592814 3592947 -81845533 - FLAM_A SINE Alu 0 142 3 243 320 46 86 chr17 3593116 3593291 -81845189 + MER5A DNA MER1_type 21 188 -1 212 242 158 32 chr17 3593866 3593961 -81844519 + L2 LINE L2 3204 3310 -3 687 193 0 17 chr17 3593997 3594116 -81844364 - FLAM_A SINE Alu -16 117 1 935 305 90 23 chr17 3594531 3595074 -81843406 + L2 LINE L2 2493 3068 -245 2232 128 0 0 chr17 3595202 3595506 -81842974 + AluSx SINE Alu 2 305 -7 2129 133 0 3 chr17 3596254 3596547 -81841933 - AluSx SINE Alu -11 301 10 2283 118 3 10 chr17 3596562 3596876 -81841604 - AluSx SINE Alu 0 312 1 2019 104 0 4 chr17 3597408 3597676 -81840804 - AluSx SINE Alu -45 267 1 1841 239 47 48 chr17 3598359 3598440 -81840040 + L1M4c LINE L1 2070 2150 -4232 2190 114 0 17 chr17 3598440 3598749 -81839731 + AluSx SINE Alu 1 304 0 1841 239 47 48 chr17 3598749 3598780 -81839700 + L1M4c LINE L1 2150 2180 -4202 1887 158 0 16 chr17 3598780 3599083 -81839397 + AluJo SINE Alu 1 298 -14 1841 239 47 48 chr17 3599083 3599353 -81839127 + L1M4c LINE L1 2180 2449 -3933 2583 60 0 0 chr17 3599353 3599653 -81838827 + AluY SINE Alu 1 300 -11 1841 239 47 48 chr17 3599653 3600012 -81838468 + L1M4c LINE L1 2449 2799 -3583 1525 35 29 0 chr17 3600012 3600186 -81838294 + SVA Other Other 1208 1386 0 1841 239 47 48 chr17 3600186 3600234 -81838246 + L1M4c LINE L1 2799 2846 -3536 461 213 21 0 chr17 3600235 3600329 -81838151 - AluJo SINE Alu -178 134 39 761 188 19 0 chr17 3600338 3600498 -81837982 + L1M4c LINE L1 2836 2998 -3384 728 208 39 0 chr17 3600506 3600636 -81837844 - AluJo SINE Alu -176 136 2 4289 209 37 40 chr17 3600637 3601449 -81837031 + L1M4c LINE L1 2987 3799 -2583 2064 112 0 4 chr17 3601449 3601727 -81836753 + AluSx SINE Alu 27 303 -9 4289 209 37 40 chr17 3601727 3601960 -81836520 + L1M4c LINE L1 3799 4031 -2351 2196 112 14 7 chr17 3601960 3602256 -81836224 - AluSx SINE Alu -14 298 1 4289 209 37 40 chr17 3602256 3602520 -81835960 + L1M4c LINE L1 4031 4294 -2088 761 186 54 143 chr17 3602621 3602796 -81835684 - MLT1F LTR MaLR -224 318 188 1975 162 0 0 chr17 3602796 3603086 -81835394 - AluJo SINE Alu -22 290 1 761 186 54 143 chr17 3603086 3603259 -81835221 - MLT1F LTR MaLR -354 188 1 603 264 16 36 chr17 3603269 3603462 -81835018 + L2 LINE L2 3114 3302 -11 213 39 0 0 chr17 3603497 3603523 -81834957 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1557 170 4 43 chr17 3603595 3603872 -81834608 - AluJb SINE Alu -45 267 2 275 62 0 42 chr17 3603873 3603921 -81834559 + MER65A LTR ERV1 400 445 0 2143 117 0 52 chr17 3603974 3604298 -81834182 + AluSx SINE Alu 1 307 -5 422 131 31 46 chr17 3604298 3604428 -81834052 + GA-rich Low_complexity Low_complexity 1 128 0 390 267 89 5 chr17 3604619 3604835 -81833645 + L1M4 LINE L1 5191 5424 -738 251 175 0 32 chr17 3604851 3604914 -81833566 + GA-rich Low_complexity Low_complexity 3 63 0 2272 104 0 13 chr17 3604956 3605264 -81833216 + AluSx SINE Alu 1 304 -8 2218 96 27 7 chr17 3605541 3605842 -81832638 - AluSx SINE Alu -5 307 1 391 332 156 17 chr17 3606015 3606253 -81832227 + L2 LINE L2 2079 2349 -965 814 190 70 25 chr17 3606254 3606412 -81832068 + FRAM SINE Alu 1 161 -15 516 328 72 39 chr17 3606454 3606523 -81831957 + L2 LINE L2 2376 2441 -873 1851 141 56 0 chr17 3606523 3606807 -81831673 - AluSx SINE Alu -12 300 1 516 328 72 39 chr17 3606807 3606826 -81831654 + L2 LINE L2 2441 2458 -856 2198 113 7 0 chr17 3606826 3607127 -81831353 - AluSx SINE Alu -9 303 1 516 328 72 39 chr17 3607127 3607489 -81830991 + L2 LINE L2 2458 2847 -467 2452 86 3 0 chr17 3607489 3607790 -81830690 - AluSp SINE Alu -11 302 1 516 328 72 39 chr17 3607790 3607822 -81830658 + L2 LINE L2 2847 2876 -438 263 421 64 0 chr17 3607929 3608069 -81830411 + L2 LINE L2 3123 3271 -1 1039 174 0 0 chr17 3608077 3608238 -81830242 - AluSg/x SINE Alu -16 294 134 1743 154 79 101 chr17 3608238 3608672 -81829808 + L1MB7 LINE L1 5674 6116 -68 2514 74 0 0 chr17 3608672 3608969 -81829511 + AluY SINE Alu 1 297 -14 1741 164 14 3 chr17 3608979 3609272 -81829208 + AluSx SINE Alu 13 308 -4 1778 171 31 0 chr17 3609272 3609559 -81828921 + AluJb SINE Alu 1 296 -16 1743 154 79 101 chr17 3609559 3609617 -81828863 + L1MB7 LINE L1 6123 6167 -17 352 221 12 35 chr17 3609923 3610009 -81828471 + MIR SINE MIR 41 124 -84 2463 69 0 0 chr17 3610276 3610567 -81827913 + AluY SINE Alu 1 291 -20 370 100 29 43 chr17 3610851 3610921 -81827559 + L1MB7 LINE L1 5808 5876 -308 2408 80 3 3 chr17 3611866 3612166 -81826314 - AluSq SINE Alu -13 300 1 191 386 29 0 chr17 3613862 3613932 -81824548 - MIR SINE MIR -96 112 41 1227 91 5 32 chr17 3613942 3614129 -81824351 - L1PA11 LINE L1 0 6174 5993 2402 91 0 0 chr17 3614458 3614756 -81823724 + AluSx SINE Alu 1 298 -14 439 356 75 61 chr17 3615058 3615418 -81823062 - L2 LINE L2 -2 3270 2906 1122 254 135 21 chr17 3615445 3615875 -81822605 - MLT1J LTR MaLR -27 484 6 2379 70 13 7 chr17 3618040 3618338 -81820142 - AluY SINE Alu -11 300 1 197 327 0 0 chr17 3618492 3618547 -81819933 + L2 LINE L2 2716 2770 -544 323 331 18 10 chr17 3619078 3619207 -81819273 + MIR SINE MIR 18 141 -67 362 132 0 15 chr17 3619468 3619536 -81818944 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 292 129 0 48 chr17 3619536 3619598 -81818882 + (GGAGAA)n Simple_repeat Simple_repeat 3 61 0 2293 109 0 0 chr17 3619955 3620249 -81818231 + AluSg SINE Alu 1 294 -16 300 270 81 0 chr17 3620335 3620483 -81817997 + L1ME4a LINE L1 5962 6121 0 360 297 12 36 chr17 3620882 3621047 -81817433 + MLT1K LTR MaLR 126 286 -302 494 215 25 0 chr17 3621118 3621239 -81817241 + MLT1K LTR MaLR 462 585 -3 992 193 6 0 chr17 3621725 3621891 -81816589 + FAM SINE Alu 1 167 -8 1000 184 54 97 chr17 3621955 3622145 -81816335 - L1M4 LINE L1 -914 5232 5036 2064 140 0 31 chr17 3622145 3622467 -81816013 - AluSx SINE Alu 0 312 1 1000 184 54 97 chr17 3622467 3622560 -81815920 - L1M4 LINE L1 -1110 5036 4962 2328 118 0 3 chr17 3622560 3622864 -81815616 - AluSx SINE Alu -9 303 1 1000 184 54 97 chr17 3622864 3622910 -81815570 - L1M4 LINE L1 -1184 4962 4916 427 307 101 46 chr17 3623420 3623638 -81814842 + MIR SINE MIR 2 231 -31 229 181 0 113 chr17 3625097 3625274 -81813206 + G-rich Low_complexity Low_complexity 2 158 0 2160 95 0 3 chr17 3625632 3625961 -81812519 + AluSx SINE Alu 1 328 0 1026 108 43 0 chr17 3626642 3626820 -81811660 - AluSp SINE Alu 0 324 141 1684 228 49 48 chr17 3626929 3627455 -81811025 - L1MC4 LINE L1 -276 7766 7240 819 241 66 0 chr17 3627462 3627674 -81810806 - L1MC4 LINE L1 -990 7052 6827 310 155 13 25 chr17 3627694 3627773 -81810707 - AluS SINE Alu -238 65 1 265 265 0 13 chr17 3627773 3627857 -81810623 - L1MC4 LINE L1 -1474 6530 6439 270 268 14 14 chr17 3628728 3628799 -81809681 + L2 LINE L2 3198 3268 -4 2242 103 7 0 chr17 3629277 3629567 -81808913 + AluSg SINE Alu 1 292 -18 281 311 92 0 chr17 3631358 3631477 -81807003 - MER117 DNA MER1_type -22 175 46 1804 177 0 13 chr17 3631584 3631883 -81806597 - AluJb SINE Alu -17 295 1 1758 180 9 25 chr17 3631942 3632259 -81806221 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 3632598 3632632 -81805848 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr17 3632720 3632741 -81805739 + AT_rich Low_complexity Low_complexity 1 21 0 2157 117 3 13 chr17 3633589 3633898 -81804582 + AluSx SINE Alu 1 306 -6 1978 93 0 0 chr17 3634654 3634911 -81803569 - AluY SINE Alu 0 311 55 2442 93 0 0 chr17 3635673 3635975 -81802505 + AluSq SINE Alu 1 302 -11 1749 169 23 13 chr17 3635997 3636305 -81802175 + AluJo SINE Alu 1 311 -1 1039 188 66 89 chr17 3636984 3637079 -81801401 - LTR37A LTR ERV1 0 426 330 201 74 0 0 chr17 3637079 3637106 -81801374 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1511 168 24 71 chr17 3637106 3637256 -81801224 - AluJb SINE Alu -29 283 152 2189 102 3 16 chr17 3637256 3637559 -81800921 - AluSx SINE Alu -9 303 5 1511 168 24 71 chr17 3637559 3637705 -81800775 - AluJb SINE Alu -160 152 1 1039 188 66 89 chr17 3637705 3638002 -81800478 - LTR37A LTR ERV1 -94 332 42 222 37 0 0 chr17 3638014 3638041 -81800439 + (T)n Simple_repeat Simple_repeat 1 27 0 2428 70 30 0 chr17 3638237 3638539 -81799941 - AluY SINE Alu 0 311 1 1159 138 10 20 chr17 3638954 3639157 -81799323 - L1MA2 LINE L1 0 6304 6104 194 352 33 0 chr17 3639244 3639335 -81799145 - L2 LINE L2 -6 3266 3173 663 320 93 53 chr17 3640029 3641070 -81797410 - L2 LINE L2 -13 3259 2163 1769 163 7 29 chr17 3641070 3641377 -81797103 + AluJb SINE Alu 1 300 -12 663 320 93 53 chr17 3641377 3641641 -81796839 - L2 LINE L2 -1109 2163 1911 418 260 180 0 chr17 3641813 3641963 -81796517 - MER5A DNA MER1_type 0 189 13 213 315 56 0 chr17 3642006 3642095 -81796385 - L3 LINE CR1 -67 1510 1417 356 289 162 29 chr17 3642228 3642536 -81795944 - L3 LINE CR1 -555 1022 674 2143 107 0 32 chr17 3642911 3643219 -81795261 + AluSx SINE Alu 2 299 -13 2421 88 3 0 chr17 3643553 3643858 -81794622 - AluSp SINE Alu -7 306 1 2033 134 21 3 chr17 3643861 3644152 -81794328 - AluSx SINE Alu -15 297 2 186 311 107 80 chr17 3645040 3645265 -81793215 - L2 LINE L2 -97 3175 2945 1153 60 0 0 chr17 3645383 3645517 -81792963 - AluSq/x SINE Alu -179 134 1 216 271 19 84 chr17 3645550 3645657 -81792823 - MIR3 SINE MIR -1 207 108 2490 78 3 0 chr17 3646343 3646649 -81791831 + AluSp SINE Alu 1 307 -6 280 93 19 19 chr17 3646659 3646713 -81791767 + L1MB7 LINE L1 6130 6183 -1 1801 102 0 38 chr17 3646723 3646987 -81791493 + AluSx SINE Alu 58 311 -1 312 207 35 0 chr17 3647040 3647098 -81791382 + AluS SINE Alu 2 61 -239 2332 90 3 3 chr17 3647363 3647663 -81790817 - AluSx SINE Alu -12 300 1 2072 122 0 0 chr17 3647681 3647988 -81790492 - AluSx SINE Alu 0 309 3 625 256 84 0 chr17 3648368 3648559 -81789921 - MIR SINE MIR 0 262 56 2313 92 20 3 chr17 3648568 3648872 -81789608 - AluY SINE Alu -2 309 1 670 177 15 23 chr17 3648872 3649002 -81789478 - FLAM_A SINE Alu -4 129 1 219 158 0 0 chr17 3649003 3649041 -81789439 - MIR SINE MIR -71 191 154 283 85 0 0 chr17 3649149 3649196 -81789284 + Alu SINE Alu 255 301 0 2197 65 41 31 chr17 3649237 3649531 -81788949 - AluY SINE Alu -6 305 9 884 195 227 35 chr17 3650139 3650395 -81788085 + AluSx SINE Alu 1 305 -7 1405 181 89 14 chr17 3650399 3650506 -81787974 + AluJb SINE Alu 1 99 -213 2235 117 0 0 chr17 3650506 3650804 -81787676 + AluSq SINE Alu 3 300 -13 1405 181 89 14 chr17 3650804 3650978 -81787502 + AluJb SINE Alu 99 303 -9 1703 163 46 0 chr17 3651943 3652225 -81786255 - AluJo SINE Alu -17 295 1 355 273 40 66 chr17 3652303 3652501 -81785979 - HAL1b LINE L1 -916 432 240 260 278 204 6 chr17 3653045 3653207 -81785273 - MLT1K LTR MaLR -17 571 378 194 224 0 26 chr17 3653485 3653561 -81784919 + G-rich Low_complexity Low_complexity 3 76 0 180 228 0 0 chr17 3653625 3653682 -81784798 + G-rich Low_complexity Low_complexity 1 57 0 260 266 46 29 chr17 3653720 3653893 -81784587 + G-rich Low_complexity Low_complexity 3 178 0 1253 134 0 21 chr17 3653912 3654099 -81784381 - AluSx SINE Alu -129 183 1 2345 107 0 0 chr17 3654434 3654734 -81783746 - AluSx SINE Alu -10 302 3 388 289 139 66 chr17 3654846 3654893 -81783587 - HAL1 LINE L1 -590 1917 1875 2305 98 0 3 chr17 3654893 3655189 -81783291 - AluSc SINE Alu -14 295 1 388 289 139 66 chr17 3655189 3655629 -81782851 - HAL1 LINE L1 -632 1875 1394 1834 171 13 10 chr17 3655715 3656055 -81782425 + AluJo SINE Alu 1 341 0 2289 121 0 6 chr17 3656229 3656542 -81781938 - AluSx SINE Alu -1 311 1 335 167 0 39 chr17 3656872 3656950 -81781530 + L1ME4a LINE L1 6046 6120 -1 2216 100 10 3 chr17 3656997 3657296 -81781184 + AluSx SINE Alu 1 301 -11 2321 62 10 10 chr17 3659257 3659545 -81778935 + AluSg SINE Alu 1 288 -22 336 227 106 63 chr17 3659617 3659677 -81778803 + L1MC/D LINE L1 5198 5254 -984 1901 158 7 3 chr17 3659677 3659974 -81778506 - AluJb SINE Alu -14 298 1 336 227 106 63 chr17 3659974 3660164 -81778316 + L1MC/D LINE L1 5254 5472 -766 1527 153 3 130 chr17 3660455 3660590 -81777890 + AluJb SINE Alu 1 151 -161 512 103 11 0 chr17 3660590 3660677 -81777803 + L1PB1 LINE L1 6063 6150 -1 1527 153 3 130 chr17 3660677 3660888 -81777592 + AluJb SINE Alu 151 303 -9 239 148 37 19 chr17 3660925 3660979 -81777501 + (CATA)n Simple_repeat Simple_repeat 2 56 0 719 224 46 0 chr17 3661302 3661476 -81777004 + MER5A DNA MER1_type 2 183 -6 189 107 0 0 chr17 3661703 3661731 -81776749 + (A)n Simple_repeat Simple_repeat 1 28 0 2265 97 0 10 chr17 3661816 3662115 -81776365 - AluSq SINE Alu -17 296 1 1642 212 13 0 chr17 3663200 3663502 -81774978 - AluJb SINE Alu -6 306 1 2081 135 7 0 chr17 3663610 3663907 -81774573 - AluSx SINE Alu -13 299 1 399 230 0 11 chr17 3664412 3664499 -81773981 - MIR SINE MIR -175 87 2 2627 208 73 66 chr17 3664528 3664649 -81773831 - L1ME1 LINE L1 -8 6092 5973 2291 120 3 3 chr17 3664649 3664958 -81773522 + AluSx SINE Alu 2 310 -2 2627 208 73 66 chr17 3664958 3665734 -81772746 - L1ME1 LINE L1 -127 5973 5188 1910 239 131 23 chr17 3665743 3666603 -81771877 - L1ME1 LINE L1 -2045 4035 3083 1294 98 0 6 chr17 3666603 3666776 -81771704 - AluSg/x SINE Alu -11 301 130 345 220 184 48 chr17 3666776 3666944 -81771536 - L1ME1 LINE L1 -2993 3087 2897 862 175 6 38 chr17 3666946 3667106 -81771374 - AluJo SINE Alu -138 174 20 497 218 77 12 chr17 3667127 3667297 -81771183 - L1ME1 LINE L1 -3570 2510 2330 1678 174 14 7 chr17 3667304 3667592 -81770888 + AluJb SINE Alu 2 291 -21 369 243 26 53 chr17 3667647 3667799 -81770681 - L1ME1 LINE L1 -5882 188 41 2123 123 0 3 chr17 3667998 3668291 -81770189 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 3668298 3668319 -81770161 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 3668400 3668423 -81770057 + AT_rich Low_complexity Low_complexity 1 23 0 1847 58 9 0 chr17 3668924 3669148 -81769332 + AluY SINE Alu 82 307 -4 650 234 96 59 chr17 3670170 3670473 -81768007 - L1MC5 LINE L1 -47 7914 7601 1662 229 112 74 chr17 3670510 3671412 -81767068 - L1MC5 LINE L1 -471 7490 6542 204 382 88 23 chr17 3672406 3672729 -81765751 + L2 LINE L2 1700 2071 -1243 2323 39 0 0 chr17 3672729 3672989 -81765491 - AluY SINE Alu -11 300 41 204 382 88 23 chr17 3672989 3673189 -81765291 + L2 LINE L2 2071 2257 -1057 2016 94 56 3 chr17 3673189 3673477 -81765003 - AluSq SINE Alu -8 305 3 1995 188 105 20 chr17 3673676 3674172 -81764308 - L1MB7 LINE L1 -56 6128 5591 1386 167 0 70 chr17 3674206 3674493 -81763987 - AluJo SINE Alu -23 289 23 2028 87 38 11 chr17 3674800 3675087 -81763393 - AluSg1 SINE Alu -10 299 5 498 33 0 0 chr17 3675163 3675223 -81763257 + (TA)n Simple_repeat Simple_repeat 2 61 0 1364 198 32 12 chr17 3675225 3675478 -81763002 - AluJo SINE Alu -31 281 24 294 179 32 0 chr17 3675479 3675574 -81762906 + (TA)n Simple_repeat Simple_repeat 2 99 0 2102 129 3 3 chr17 3675575 3675878 -81762602 - AluSg SINE Alu -7 303 1 231 306 24 0 chr17 3675919 3676004 -81762476 - L1ME4a LINE L1 -67 6054 5968 204 135 0 0 chr17 3676006 3676043 -81762437 + (TG)n Simple_repeat Simple_repeat 1 37 0 333 182 0 80 chr17 3676223 3676244 -81762236 - L1ME4a LINE L1 -327 5794 5773 2342 86 7 13 chr17 3676244 3676547 -81761933 + AluSx SINE Alu 1 301 -11 333 182 0 80 chr17 3676547 3676613 -81761867 - L1ME4a LINE L1 -348 5773 5714 230 315 177 35 chr17 3678779 3679316 -81759164 + L2 LINE L2 2248 2860 -454 2137 104 3 7 chr17 3680069 3680368 -81758112 + AluY SINE Alu 1 298 -13 985 185 45 15 chr17 3680435 3680635 -81757845 + MER3 DNA MER1_type 1 206 -3 376 250 121 0 chr17 3680981 3681105 -81757375 - MIR SINE MIR -112 150 12 2197 103 20 3 chr17 3681107 3681409 -81757071 - AluSx SINE Alu -5 307 1 425 186 23 12 chr17 3681612 3681698 -81756782 - L2 LINE L2 -43 3270 3184 * 508 304 62 41 chr17 3681690 3682087 -81756393 - L2 LINE L2 -258 3055 2653 1957 160 3 7 chr17 3682162 3682469 -81756011 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 3682774 3682795 -81755685 + AT_rich Low_complexity Low_complexity 1 21 0 1885 136 39 0 chr17 3683034 3683314 -81755166 + AluSx SINE Alu 1 291 -21 683 171 0 8 chr17 3683872 3683989 -81754491 + AluJo/FLAM SINE Alu 2 117 -195 539 158 158 36 chr17 3683984 3684123 -81754357 - AluSg/x SINE Alu -16 296 141 * 1717 154 0 0 chr17 3684130 3684389 -81754091 - AluSx SINE Alu -53 259 1 1104 123 0 0 chr17 3684423 3684578 -81753902 + AluJb SINE Alu 132 286 -26 219 88 0 0 chr17 3685291 3685325 -81753155 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 2517 74 0 0 chr17 3686751 3687050 -81751430 + AluSx SINE Alu 1 299 -13 229 299 19 37 chr17 3687141 3687248 -81751232 - L2 LINE L2 -2673 641 537 793 172 31 0 chr17 3687264 3687392 -81751088 - FLAM_C SINE Alu -1 132 1 843 185 5 43 chr17 3687530 3687714 -81750766 + FRAM SINE Alu 1 172 -4 230 176 59 0 chr17 3688264 3688315 -81750165 + L2 LINE L2 3209 3262 -10 337 234 47 55 chr17 3688337 3688465 -81750015 + MIR3 SINE MIR 33 159 -49 2469 63 3 22 chr17 3688739 3689055 -81749425 - AluSg SINE Alu 0 310 1 191 257 124 9 chr17 3689516 3689621 -81748859 + MIR SINE MIR 16 132 -130 1212 108 11 17 chr17 3692226 3692402 -81746078 + FRAM SINE Alu 1 171 -5 859 201 39 44 chr17 3694473 3694677 -81743803 - MER3 DNA MER1_type -5 204 2 251 167 83 69 chr17 3695014 3695086 -81743394 - MIR SINE MIR -31 231 159 1641 176 27 10 chr17 3695173 3695468 -81743012 - AluJo SINE Alu -10 302 3 1703 58 24 0 chr17 3695820 3696028 -81742452 - AluY SINE Alu -19 292 80 2608 50 0 0 chr17 3696028 3696324 -81742156 - AluY SINE Alu -14 297 1 1223 183 114 19 chr17 3696598 3696861 -81741619 + AluJo SINE Alu 1 288 -24 376 88 0 18 chr17 3696885 3696942 -81741538 + Alu SINE Alu 238 293 -8 1420 124 139 23 chr17 3698027 3698286 -81740194 - AluSg SINE Alu -21 289 1 445 298 165 50 chr17 3698543 3698761 -81739719 - LTR16A LTR ERVL -7 443 201 795 196 266 32 chr17 3698906 3699218 -81739262 + MLT1F1 LTR MaLR 183 567 0 1799 128 60 0 chr17 3699745 3700027 -81738453 - AluSx SINE Alu -13 299 1 1360 128 50 5 chr17 3700161 3700379 -81738101 + MER30 DNA MER1_type 1 228 -2 2209 113 3 3 chr17 3700820 3701120 -81737360 + AluSq SINE Alu 1 300 -13 277 235 78 72 chr17 3701194 3701347 -81737133 + L1 LINE L1 4882 5035 -1111 874 168 7 7 chr17 3701456 3701611 -81736869 + AluSg/x SINE Alu 135 289 -21 369 0 0 0 chr17 3701613 3701654 -81736826 + (TA)n Simple_repeat Simple_repeat 2 42 0 2003 141 3 7 chr17 3701831 3702128 -81736352 - AluSx SINE Alu -14 298 3 1818 161 43 7 chr17 3702130 3702429 -81736051 - AluSx SINE Alu -2 310 1 2236 86 21 3 chr17 3702436 3702726 -81735754 - AluSq SINE Alu -18 295 1 400 251 104 32 chr17 3702732 3703117 -81735363 + L1ME3A LINE L1 5521 5940 -230 522 69 14 0 chr17 3703566 3703638 -81734842 - U3 snRNA snRNA -144 73 1 2235 128 0 0 chr17 3703864 3704176 -81734304 - AluSx SINE Alu 0 312 1 1816 134 40 0 chr17 3705024 3705300 -81733180 + AluSg SINE Alu 1 287 -23 254 319 11 0 chr17 3705487 3705578 -81732902 + GA-rich Low_complexity Low_complexity 4 95 0 2144 114 0 20 chr17 3705662 3705968 -81732512 + AluSx SINE Alu 1 300 -12 26 30 0 0 chr17 3706049 3706082 -81732398 + AT_rich Low_complexity Low_complexity 1 33 0 2251 128 0 7 chr17 3706110 3706414 -81732066 + AluSx SINE Alu 1 302 -10 397 306 0 0 chr17 3706790 3706914 -81731566 + G-rich Low_complexity Low_complexity 1 124 0 384 249 0 0 chr17 3706926 3707091 -81731389 + G-rich Low_complexity Low_complexity 1 165 0 351 167 0 0 chr17 3707125 3707215 -81731265 + G-rich Low_complexity Low_complexity 1 90 0 1458 98 0 0 chr17 3707255 3707439 -81731041 + AluSg/x SINE Alu 116 299 -13 22 0 0 0 chr17 3707537 3707559 -81730921 + AT_rich Low_complexity Low_complexity 1 22 0 1118 208 64 13 chr17 3707744 3707980 -81730500 - MLT1F1 LTR MaLR -307 260 13 615 248 30 0 chr17 3708020 3708153 -81730327 - MER119 DNA MER1_type -391 192 56 421 167 175 0 chr17 3708639 3708753 -81729727 - L1MA9 LINE L1 -10 6302 6169 1437 204 87 63 chr17 3708795 3709212 -81729268 - L1MC4a LINE L1 0 7808 7377 1748 175 24 0 chr17 3709212 3709503 -81728977 + AluJo SINE Alu 1 298 -14 1437 204 87 63 chr17 3709503 3709546 -81728934 - L1MC4a LINE L1 -431 7377 7337 1810 174 26 10 chr17 3709658 3709962 -81728518 + AluJb SINE Alu 1 309 -3 220 295 77 0 chr17 3710014 3710092 -81728388 + L2 LINE L2 3191 3274 -39 199 396 20 41 chr17 3711619 3711816 -81726664 + L2 LINE L2 2992 3184 -88 1686 141 46 89 chr17 3711921 3712268 -81726212 + MER7A DNA MER2_type 1 330 -16 1615 167 33 46 chr17 3712501 3712807 -81725673 - AluJo SINE Alu -10 302 1 478 239 23 6 chr17 3712814 3712942 -81725538 - L1MA9 LINE L1 0 6291 6167 2329 108 7 0 chr17 3713059 3713364 -81725116 + AluSx SINE Alu 1 307 -5 2134 122 7 0 chr17 3714856 3715151 -81723329 + AluSg SINE Alu 1 297 -13 26 30 0 0 chr17 3715485 3715518 -81722962 + AT_rich Low_complexity Low_complexity 1 33 0 627 104 144 80 chr17 3716043 3716168 -81722312 + FLAM_C SINE Alu 1 133 0 2053 116 37 7 chr17 3716470 3716764 -81721716 - AluSp SINE Alu -10 303 1 2082 125 7 0 chr17 3716767 3717056 -81721424 - AluSx SINE Alu -21 291 1 1978 111 17 10 chr17 3717547 3717835 -81720645 - AluSg SINE Alu -20 290 1 441 270 146 74 chr17 3718210 3718643 -81719837 + L1MC4 LINE L1 7579 8042 0 1944 72 0 0 chr17 3718723 3718959 -81719521 - AluY SINE Alu -75 236 1 303 242 53 45 chr17 3718962 3719094 -81719386 - L1M1 LINE L1 -4139 3426 3294 938 149 24 0 chr17 3719154 3719322 -81719158 + L1MA8 LINE L1 6092 6263 -28 938 189 12 0 chr17 3719324 3719488 -81718992 + FRAM SINE Alu 1 163 -13 285 183 0 0 chr17 3719538 3719598 -81718882 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1628 182 0 30 chr17 3720917 3721214 -81717266 - AluJb SINE Alu -24 288 1 334 148 0 33 chr17 3721216 3721277 -81717203 - FLAM_A SINE Alu 0 133 75 282 253 32 32 chr17 3721307 3721402 -81717078 - L2 LINE L2 -11 3302 3208 2138 117 7 0 chr17 3721512 3721810 -81716670 + AluSx SINE Alu 1 300 -12 190 176 40 135 chr17 3722168 3722210 -81716270 - L2 LINE L2 -60 3253 3219 2146 124 0 0 chr17 3722210 3722508 -81715972 + AluY SINE Alu 1 298 -13 190 176 40 135 chr17 3722508 3722539 -81715941 - L2 LINE L2 -94 3219 3187 723 162 0 63 chr17 3723013 3723155 -81715325 + FLAM_C SINE Alu 1 133 0 2136 104 0 4 chr17 3723454 3723768 -81714712 - AluSc SINE Alu 0 313 1 670 177 15 23 chr17 3723768 3723898 -81714582 - FLAM_A SINE Alu -4 129 1 596 258 16 27 chr17 3723899 3724085 -81714395 - MIR SINE MIR -71 191 8 2183 134 0 0 chr17 3724335 3724633 -81713847 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 3724652 3724677 -81713803 + AT_rich Low_complexity Low_complexity 1 25 0 1321 182 22 85 chr17 3725588 3725906 -81712574 - AluJo SINE Alu -14 298 1 488 179 8 60 chr17 3725911 3726028 -81712452 - FLAM_A SINE Alu -13 129 19 931 114 0 8 chr17 3726032 3726164 -81712316 + AluJb SINE Alu 171 301 -11 2050 133 13 0 chr17 3726169 3726471 -81712009 + AluSg SINE Alu 1 306 -4 1979 137 3 13 chr17 3727232 3727545 -81710935 + AluJb SINE Alu 1 310 -2 200 318 123 26 chr17 3727566 3727761 -81710719 + L2 LINE L2 2083 2296 -1018 310 291 250 15 chr17 3728139 3728335 -81710145 + MIR SINE MIR 21 262 0 677 228 59 41 chr17 3728406 3728552 -81709928 + MIR SINE MIR 21 174 -88 2235 129 0 15 chr17 3728552 3728894 -81709586 + MER1B DNA MER1_type 1 337 0 677 228 59 41 chr17 3728894 3728966 -81709514 + MIR SINE MIR 174 243 -19 307 54 0 0 chr17 3729078 3729115 -81709365 + AluSp SINE Alu 132 168 -135 421 123 0 0 chr17 3729115 3729172 -81709308 + AluS SINE Alu 232 288 -24 1061 146 113 17 chr17 3729564 3729803 -81708677 - MER58B DNA MER1_type 0 341 80 225 232 24 110 chr17 3729845 3729927 -81708553 - MER58B DNA MER1_type -251 90 16 1060 186 15 51 chr17 3730801 3731075 -81707405 + L1ME1 LINE L1 4382 4645 -1501 1393 163 135 0 chr17 3731075 3731320 -81707160 - AluJo SINE Alu -17 295 18 1079 233 103 21 chr17 3731333 3731711 -81706769 + L1ME1 LINE L1 4634 5042 -1104 878 136 45 32 chr17 3731720 3731875 -81706605 + FAM SINE Alu 1 46 -3 3255 193 101 43 chr17 3731920 3732175 -81706305 + L1ME1 LINE L1 4980 5219 -947 2122 111 4 0 chr17 3732175 3732455 -81706025 + AluSx SINE Alu 21 301 -11 3255 193 101 43 chr17 3732455 3732687 -81705793 + L1ME1 LINE L1 5219 5436 -730 1610 172 62 10 chr17 3732687 3732978 -81705502 + AluJo SINE Alu 1 306 -6 3255 193 101 43 chr17 3732978 3733397 -81705083 + L1ME1 LINE L1 5436 5963 -203 1771 84 0 4 chr17 3733397 3733646 -81704834 + AluSx SINE Alu 58 305 0 3255 193 101 43 chr17 3733646 3733858 -81704622 + L1ME1 LINE L1 5963 6161 -5 1406 217 73 63 chr17 3734258 3734426 -81704054 + MLT1D LTR MaLR 3 168 -337 2445 81 3 0 chr17 3734426 3734734 -81703746 + AluY SINE Alu 1 309 -2 1406 217 73 63 chr17 3734734 3735059 -81703421 + MLT1D LTR MaLR 168 501 -4 225 321 0 0 chr17 3735310 3735363 -81703117 - MIR SINE MIR -155 107 55 2034 116 7 14 chr17 3735658 3735951 -81702529 - AluSq SINE Alu -22 291 1 2363 99 0 3 chr17 3736214 3736517 -81701963 - AluSg SINE Alu -8 302 1 264 200 42 13 chr17 3736645 3736724 -81701756 - L1ME LINE L1 -557 5564 5500 2091 46 81 0 chr17 3737041 3737301 -81701179 + AluSx SINE Alu 21 301 -11 3481 169 23 73 chr17 3737924 3738709 -81699771 - L1MB8 LINE L1 -5 6173 5428 2345 100 3 0 chr17 3739102 3739441 -81699039 + AluSx SINE Alu 1 340 0 1763 142 46 14 chr17 3739597 3739879 -81698601 + AluJb SINE Alu 1 291 -21 351 202 0 0 chr17 3739903 3739987 -81698493 + GA-rich Low_complexity Low_complexity 3 86 0 219 265 0 20 chr17 3740018 3740067 -81698413 - MIR SINE MIR -164 98 51 823 248 48 41 chr17 3740067 3740337 -81698143 + HsTC2c DNA Tc2 457 728 -1 432 175 38 0 chr17 3740753 3740833 -81697647 - LTR32 LTR ERVL -77 394 312 1945 134 31 0 chr17 3741230 3741521 -81696959 - AluSx SINE Alu -12 300 1 236 358 29 3 chr17 3742037 3742222 -81696258 + L2 LINE L2 2712 2955 -317 184 250 235 0 chr17 3742266 3742334 -81696146 - L2 LINE L2 -1 3312 3229 354 231 51 0 chr17 3742356 3742434 -81696046 + MER3 DNA MER1_type 1 82 -127 293 315 176 13 chr17 3742597 3742835 -81695645 + L2 LINE L2 2921 3197 -116 296 262 87 33 chr17 3742893 3743076 -81695404 - L2 LINE L2 -1 3312 3120 694 183 95 53 chr17 3743146 3743315 -81695165 + FRAM SINE Alu 1 40 0 254 262 182 27 chr17 3744019 3744206 -81694274 - MER112 DNA MER1_type -42 218 3 1111 162 0 0 chr17 3744209 3744382 -81694098 + AluSg/x SINE Alu 126 298 -14 1917 99 4 11 chr17 3744780 3745052 -81693428 - AluSg SINE Alu 0 310 41 2213 123 0 0 chr17 3745228 3745537 -81692943 + AluSx SINE Alu 1 309 -3 1701 105 9 4 chr17 3745650 3745879 -81692601 + AluSq SINE Alu 1 230 -83 346 257 50 30 chr17 3748459 3748560 -81689920 - MIR SINE MIR -155 107 5 1341 177 117 11 chr17 3748993 3749259 -81689221 - AluJb SINE Alu -14 298 5 1919 96 82 11 chr17 3749921 3750201 -81688279 - AluSp SINE Alu -13 300 1 2352 88 3 0 chr17 3750512 3750809 -81687671 - AluSx SINE Alu -14 298 1 1636 101 9 9 chr17 3751237 3751456 -81687024 - AluSq SINE Alu -94 219 1 2299 110 0 0 chr17 3751618 3751917 -81686563 - AluSg SINE Alu -11 299 1 282 255 158 9 chr17 3752340 3752484 -81685996 - MER5A DNA MER1_type -16 162 8 366 162 0 0 chr17 3752971 3753039 -81685441 - L1MA10 LINE L1 -2 6332 6265 2234 101 3 0 chr17 3753039 3753327 -81685153 + AluSp SINE Alu 1 289 -24 1188 155 0 0 chr17 3753332 3753506 -81684974 + AluSg/x SINE Alu 123 296 -16 2016 147 3 3 chr17 3753944 3754244 -81684236 + AluSx SINE Alu 1 300 -12 192 336 75 94 chr17 3755472 3755737 -81682743 - L2 LINE L2 -417 2897 2638 3369 188 26 39 chr17 3806249 3806370 -81632110 - L1MB7 LINE L1 -8 6176 6055 2255 114 0 0 chr17 3806370 3806668 -81631812 + AluSx SINE Alu 1 298 -14 3369 188 26 39 chr17 3806668 3806848 -81631632 - L1MB7 LINE L1 -129 6055 5874 2274 107 7 0 chr17 3806848 3807146 -81631334 + AluSx SINE Alu 1 300 -12 3369 188 26 39 chr17 3807146 3807646 -81630834 - L1MB7 LINE L1 -310 5874 5384 2179 90 0 17 chr17 3807665 3807955 -81630525 + AluSg1 SINE Alu 1 285 -24 1817 125 23 15 chr17 3808100 3808364 -81630116 - AluJb SINE Alu -46 266 1 297 217 56 133 chr17 3808624 3808745 -81629735 + MER58C DNA MER1_type 1 111 -104 2510 77 3 0 chr17 3808745 3809056 -81629424 + AluSp SINE Alu 1 312 -1 297 217 56 133 chr17 3809056 3809077 -81629403 + MER58C DNA MER1_type 111 132 -83 274 137 27 41 chr17 3810320 3810393 -81628087 + (CGGGG)n Simple_repeat Simple_repeat 2 73 0 343 308 34 0 chr17 3810954 3811071 -81627409 - MIR SINE MIR -1 261 141 1736 118 77 83 chr17 3811071 3811384 -81627096 - AluSx SINE Alu -1 311 1 801 185 7 0 chr17 3811385 3811520 -81626960 - AluSq/x SINE Alu -176 136 1 342 309 12 0 chr17 3811520 3811604 -81626876 - MIR SINE MIR -115 147 63 1584 96 9 9 chr17 3812106 3812335 -81626145 - AluSq SINE Alu -84 229 1 31 0 0 0 chr17 3814518 3814549 -81623931 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 3815006 3815028 -81623452 + GC_rich Low_complexity Low_complexity 1 22 0 945 137 37 19 chr17 3815463 3815624 -81622856 - AluJo SINE Alu -41 271 108 2330 92 3 0 chr17 3815633 3815936 -81622544 + AluSx SINE Alu 5 308 -4 1314 85 11 26 chr17 3815938 3816127 -81622353 + AluY SINE Alu 126 311 0 1135 116 18 0 chr17 3816390 3816554 -81621926 - AluSq SINE Alu -68 245 79 853 193 0 0 chr17 3817134 3817274 -81621206 - FLAM_C SINE Alu -3 140 1 2240 89 7 7 chr17 3817472 3817786 -81620694 - AluSp SINE Alu 0 314 1 2242 124 7 0 chr17 3818060 3818358 -81620122 - AluSx SINE Alu -12 300 1 667 169 0 17 chr17 3818449 3818567 -81619913 + FLAM_C SINE Alu 2 117 -26 2553 57 0 0 chr17 3818680 3818976 -81619504 - AluY SINE Alu -15 296 1 720 165 0 0 chr17 3819240 3819355 -81619125 - AluSc SINE Alu -52 257 143 1414 264 41 2 chr17 3819501 3819937 -81618543 + L2 LINE L2 2262 2714 -600 633 197 39 0 chr17 3819937 3820064 -81618416 + FLAM_C SINE Alu 2 133 0 2119 209 43 16 chr17 3820064 3820691 -81617789 + L1M4 LINE L1 3126 3769 -2377 2174 82 0 38 chr17 3820693 3821164 -81617316 + AluY SINE Alu 1 460 0 480 164 27 0 chr17 3821179 3821289 -81617191 + GA-rich Low_complexity Low_complexity 1 113 0 1393 115 6 0 chr17 3821419 3821602 -81616878 - AluSx SINE Alu -128 184 1 2233 103 3 3 chr17 3821602 3821904 -81616576 - AluSx SINE Alu -5 307 6 1895 132 24 14 chr17 3821911 3822207 -81616273 - AluSx SINE Alu -13 299 1 397 281 150 22 chr17 3822210 3822523 -81615957 + L2 LINE L2 524 876 -2438 2208 114 0 26 chr17 3822523 3822829 -81615651 - AluSg SINE Alu -7 303 6 2282 106 6 3 chr17 3822856 3823168 -81615312 - AluSq SINE Alu 0 313 1 2223 83 30 17 chr17 3823323 3823623 -81614857 + AluSc SINE Alu 1 304 -5 192 40 0 0 chr17 3824164 3824189 -81614291 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1162 106 5 96 chr17 3824337 3824563 -81613917 + AluSg/x SINE Alu 117 324 0 234 128 0 0 chr17 3824811 3824850 -81613630 + (CTCA)n Simple_repeat Simple_repeat 1 39 0 1306 88 0 0 chr17 3824863 3825033 -81613447 + AluSg/x SINE Alu 137 306 -6 186 362 39 16 chr17 3825069 3825196 -81613284 - L2 LINE L2 -2 3311 3182 766 181 44 111 chr17 3825448 3825718 -81612762 + AluJb SINE Alu 61 312 0 1381 105 0 0 chr17 3826497 3826669 -81611811 + AluSq SINE Alu 36 207 -106 1913 137 26 7 chr17 3827789 3828095 -81610385 + AluSq SINE Alu 1 312 -1 788 103 26 0 chr17 3828349 3828465 -81610015 - LTR8 LTR ERV1 0 691 573 2030 125 26 20 chr17 3828465 3828769 -81609711 - AluSq SINE Alu -6 307 2 1228 206 112 55 chr17 3828811 3828863 -81609617 + MLT1D LTR MaLR 1 49 -456 3156 135 6 21 chr17 3828863 3829398 -81609082 + MER1A DNA MER1_type 1 527 0 1228 206 112 55 chr17 3829398 3829747 -81608733 + MLT1D LTR MaLR 49 425 -80 2231 99 6 29 chr17 3829777 3830091 -81608389 - AluSq SINE Alu -6 307 1 2207 116 0 13 chr17 3830129 3830431 -81608049 - AluSx SINE Alu -14 298 1 1576 157 74 68 chr17 3830502 3830546 -81607934 + MSTD LTR MaLR 1 43 -353 2337 114 0 0 chr17 3830546 3830845 -81607635 - AluSq SINE Alu -12 301 3 1576 157 74 68 chr17 3830845 3831194 -81607286 + MSTD LTR MaLR 43 396 0 2311 107 7 0 chr17 3831220 3831519 -81606961 + AluSx SINE Alu 1 301 -11 366 133 17 0 chr17 3831521 3831581 -81606899 + AluJ/FLAM SINE Alu 1 61 -241 1711 167 38 0 chr17 3831727 3831991 -81606489 - AluJb SINE Alu -22 290 17 1008 187 45 107 chr17 3831991 3832105 -81606375 - L1MC5 LINE L1 -306 7655 7535 2504 73 3 0 chr17 3832105 3832407 -81606073 + AluSp SINE Alu 1 303 -10 1008 187 45 107 chr17 3832407 3832554 -81605926 - L1MC5 LINE L1 -426 7535 7431 2349 100 7 3 chr17 3832554 3832864 -81605616 + AluSq SINE Alu 1 311 -2 1008 187 45 107 chr17 3832864 3833050 -81605430 - L1MC5 LINE L1 -530 7431 7235 1381 167 4 4 chr17 3833069 3833297 -81605183 - AluJb SINE Alu 0 312 85 2324 93 7 0 chr17 3833354 3833654 -81604826 - AluSx SINE Alu -10 302 1 338 256 143 30 chr17 3833654 3833787 -81604693 + LTR67 LTR ERVL 28 175 -382 2189 121 13 0 chr17 3833847 3834153 -81604327 - AluY SINE Alu -1 310 1 644 256 18 0 chr17 3834265 3834429 -81604051 + LTR67 LTR ERVL 384 550 -7 1293 68 6 12 chr17 3834561 3834724 -81603756 - AluSq SINE Alu -151 162 1 228 273 98 35 chr17 3834830 3834973 -81603507 - L1ME LINE L1 -202 5919 5768 2421 81 3 0 chr17 3834982 3835277 -81603203 - AluSp SINE Alu -17 296 1 263 200 53 40 chr17 3835277 3835352 -81603128 - L1ME LINE L1 -2021 5787 5712 1102 176 20 39 chr17 3835367 3835411 -81603069 - L1MB3 LINE L1 0 6183 6140 2218 114 0 10 chr17 3835411 3835574 -81602906 - AluSx SINE Alu -16 296 136 2400 78 7 13 chr17 3835574 3835880 -81602600 - AluY SINE Alu -7 304 1 2218 114 0 10 chr17 3835880 3836015 -81602465 - AluSx SINE Alu -176 136 1 1102 176 20 39 chr17 3836015 3836225 -81602255 - L1MB3 LINE L1 -43 6140 5934 1674 176 4 7 chr17 3836226 3836505 -81601975 + AluJb SINE Alu 3 280 -32 260 51 0 26 chr17 3836509 3836548 -81601932 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2422 93 0 3 chr17 3836548 3836858 -81601622 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 3836858 3836881 -81601599 + AT_rich Low_complexity Low_complexity 1 23 0 368 194 11 43 chr17 3836881 3836974 -81601506 - L1MB3 LINE L1 -232 5948 5859 307 107 0 0 chr17 3836974 3837030 -81601450 - Alu SINE Alu 0 302 247 386 232 20 10 chr17 3837179 3837278 -81601202 - MLT1L LTR MaLR -108 507 408 1322 238 100 26 chr17 3837284 3837635 -81600845 - MLT1F LTR MaLR -4 538 150 2294 121 0 0 chr17 3837635 3837941 -81600539 - AluSx SINE Alu -6 306 1 1322 238 100 26 chr17 3837941 3838009 -81600471 - MLT1F LTR MaLR -392 150 88 2305 109 0 6 chr17 3838131 3838442 -81600038 - AluSq SINE Alu -4 309 1 249 326 22 0 chr17 3838534 3838626 -81599854 - MLT1L LTR MaLR -319 296 203 1958 130 27 0 chr17 3838720 3839013 -81599467 + AluSg SINE Alu 1 301 -9 346 242 97 32 chr17 3839090 3839214 -81599266 + L1ME4a LINE L1 5936 6067 -54 2322 110 0 0 chr17 3839302 3839601 -81598879 + AluSg SINE Alu 1 299 -11 420 319 137 21 chr17 3839601 3840024 -81598456 - L2 LINE L2 -648 2666 2195 809 176 8 0 chr17 3840028 3840181 -81598299 + FLAM_C SINE Alu 2 155 0 26 0 0 0 chr17 3840264 3840290 -81598190 + AT_rich Low_complexity Low_complexity 1 26 0 277 256 12 23 chr17 3840649 3840735 -81597745 + CT-rich Low_complexity Low_complexity 2 86 0 2440 84 0 0 chr17 3840847 3841143 -81597337 + AluSg SINE Alu 1 296 -14 1259 109 0 0 chr17 3841143 3841308 -81597172 + AluSg/x SINE Alu 132 296 -13 2415 100 0 0 chr17 3841319 3841630 -81596850 + AluY SINE Alu 1 311 0 2397 109 0 3 chr17 3841661 3841973 -81596507 + AluSq SINE Alu 1 311 -2 2253 116 0 0 chr17 3842105 3842406 -81596074 + AluSx SINE Alu 5 305 -7 2150 97 47 3 chr17 3842427 3842727 -81595753 + AluSp SINE Alu 1 313 0 1810 171 0 10 chr17 3842846 3843144 -81595336 + AluJo SINE Alu 15 309 -3 383 252 89 44 chr17 3843182 3843317 -81595163 - MIR SINE MIR -13 249 109 182 263 84 53 chr17 3844040 3844135 -81594345 + MIR SINE MIR 164 261 -1 353 311 53 29 chr17 3844347 3844553 -81593927 - L1M4 LINE L1 -2693 3453 3243 2260 102 0 7 chr17 3844585 3844888 -81593592 - AluSc SINE Alu -8 301 1 2448 99 0 0 chr17 3845094 3845407 -81593073 - AluSq SINE Alu 0 313 1 815 218 62 6 chr17 3845417 3845596 -81592884 - AluJb SINE Alu 0 312 124 1519 123 20 0 chr17 3846034 3846238 -81592242 + AluSg/x SINE Alu 83 290 -20 319 271 98 53 chr17 3846238 3846371 -81592109 - L1M4 LINE L1 -3652 2494 2356 269 143 0 32 chr17 3846573 3846636 -81591844 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 646 186 9 0 chr17 3846651 3846944 -81591536 - FLAM_A SINE Alu 0 294 1 236 304 98 64 chr17 3847161 3847457 -81591023 + L2 LINE L2 2966 3271 -1 1657 222 19 91 chr17 3847484 3847557 -81590923 - L2 LINE L2 0 3313 3236 2127 113 0 3 chr17 3847557 3847860 -81590620 + AluSx SINE Alu 1 302 0 1657 222 19 91 chr17 3847860 3848388 -81590092 - L2 LINE L2 -77 3236 2758 741 317 94 39 chr17 3848601 3848964 -81589516 + L2 LINE L2 558 962 -2352 2303 95 0 13 chr17 3848964 3849268 -81589212 - AluSc SINE Alu -9 300 1 741 317 94 39 chr17 3849268 3849446 -81589034 + L2 LINE L2 962 1129 -2185 612 324 76 42 chr17 3849471 3849620 -81588860 - L2 LINE L2 0 3313 3171 1924 116 98 0 chr17 3849620 3849897 -81588583 + AluSx SINE Alu 1 304 -8 612 324 76 42 chr17 3849897 3849918 -81588562 - L2 LINE L2 -142 3171 3152 1640 191 0 23 chr17 3849918 3850053 -81588427 + AluJb SINE Alu 4 141 -171 2373 97 0 0 chr17 3850053 3850353 -81588127 + AluSq SINE Alu 3 302 -11 1640 191 0 23 chr17 3850353 3850520 -81587960 + AluJb SINE Alu 141 299 -13 612 324 76 42 chr17 3850520 3850728 -81587752 - L2 LINE L2 -161 3152 2921 696 162 0 0 chr17 3850786 3850891 -81587589 + FLAM_C SINE Alu 5 109 -34 51 0 0 0 chr17 3850934 3850985 -81587495 + AT_rich Low_complexity Low_complexity 1 51 0 599 329 63 77 chr17 3850988 3851170 -81587310 - L2 LINE L2 -416 2898 2715 2216 128 0 3 chr17 3851170 3851474 -81587006 - AluSx SINE Alu -5 307 5 599 329 63 77 chr17 3851474 3851486 -81586994 - L2 LINE L2 -599 2715 2704 2001 68 89 48 chr17 3851486 3851779 -81586701 - AluY SINE Alu -6 305 1 2033 129 31 0 chr17 3851780 3852066 -81586414 - AluSc SINE Alu -14 295 1 599 329 63 77 chr17 3852066 3852114 -81586366 - L2 LINE L2 -610 2704 2657 937 118 0 22 chr17 3852114 3852250 -81586230 + FLAM_C SINE Alu 1 133 0 599 329 63 77 chr17 3852250 3852683 -81585797 - L2 LINE L2 -657 2657 2228 1255 155 4 52 chr17 3852738 3852970 -81585510 + AluJo SINE Alu 86 306 -6 2238 125 3 0 chr17 3852972 3853283 -81585197 + AluSx SINE Alu 1 312 0 2454 90 0 0 chr17 3853286 3853598 -81584882 + AluSx SINE Alu 1 312 0 830 318 48 3 chr17 3853613 3853946 -81584534 - L2 LINE L2 -1161 2153 1806 1435 285 95 36 chr17 3853959 3854644 -81583836 - L2 LINE L2 -2066 1248 524 1913 126 48 3 chr17 3854647 3854940 -81583540 + AluSx SINE Alu 1 306 -6 402 217 12 0 chr17 3854945 3855028 -81583452 - BC200 scRNA scRNA -114 86 3 452 120 0 0 chr17 3855036 3855111 -81583369 - Alu SINE Alu -3 309 235 322 158 18 0 chr17 3855211 3855268 -81583212 + AluSp SINE Alu 125 182 -121 804 209 19 0 chr17 3855281 3855439 -81583041 - AluJo/FRAM SINE Alu -5 297 137 1305 172 32 48 chr17 3855442 3855692 -81582788 - AluJb SINE Alu -19 293 48 1187 147 0 0 chr17 3856407 3856577 -81581903 + AluSg/x SINE Alu 137 306 -6 2164 76 10 53 chr17 3856580 3856884 -81581596 + AluSc SINE Alu 1 291 -18 189 0 0 0 chr17 3856904 3856925 -81581555 + (TG)n Simple_repeat Simple_repeat 2 22 0 2250 96 0 17 chr17 3857127 3857451 -81581029 - AluY SINE Alu 0 311 1 1060 104 7 0 chr17 3857451 3857595 -81580885 - AluSq/x SINE Alu -167 145 1 909 192 0 0 chr17 3857994 3858150 -81580330 + FRAM SINE Alu 1 156 -20 759 113 96 0 chr17 3858287 3858402 -81580078 - AluSq/x SINE Alu -186 127 2 475 209 55 0 chr17 3859086 3859196 -81579284 - L1MC3 LINE L1 0 7785 7670 1654 112 0 0 chr17 3859240 3859454 -81579026 - AluSg SINE Alu -81 229 16 184 100 0 0 chr17 3860272 3860302 -81578178 + L2 LINE L2 2759 2788 -526 2179 127 3 10 chr17 3860461 3860775 -81577705 - AluSx SINE Alu 0 312 1 1685 139 79 7 chr17 3860779 3861082 -81577398 + Tigger1 DNA MER2_type 182 506 -1912 1143 157 0 0 chr17 3861103 3861269 -81577211 + FRAM SINE Alu 1 158 -18 2857 16 0 0 chr17 3861271 3861579 -81576901 + AluYa5 SINE Alu 1 308 -3 2082 148 3 0 chr17 3861581 3861885 -81576595 + AluSg SINE Alu 1 305 -5 1120 75 0 0 chr17 3861906 3862040 -81576440 + AluSg SINE Alu 1 134 -176 1971 109 4 0 chr17 3862040 3862297 -81576183 + AluSg SINE Alu 1 258 -52 2486 62 7 3 chr17 3862563 3862869 -81575611 + AluY SINE Alu 3 309 -2 1369 124 0 0 chr17 3862869 3863062 -81575418 + AluSg SINE Alu 118 310 0 1247 139 6 0 chr17 3863089 3863262 -81575218 + AluSg SINE Alu 6 179 -131 2005 126 0 0 chr17 3863398 3863668 -81574812 + AluSq SINE Alu 27 296 -17 391 273 70 98 chr17 3863671 3864034 -81574446 - L1MC4 LINE L1 -153 6703 5665 208 257 29 0 chr17 3864579 3864649 -81573831 + GA-rich Low_complexity Low_complexity 1 72 0 1194 122 74 0 chr17 3865271 3865439 -81573041 - AluSp SINE Alu 0 313 126 1763 146 7 17 chr17 3865439 3865733 -81572747 - AluSx SINE Alu -21 291 1 1194 122 74 0 chr17 3865733 3865779 -81572701 - AluSp SINE Alu -187 126 85 958 180 23 6 chr17 3865801 3865839 -81572641 - AluJo SINE Alu -137 175 139 2539 67 0 0 chr17 3865839 3866136 -81572344 - AluSx SINE Alu -15 297 1 958 180 23 6 chr17 3866136 3866269 -81572211 - AluJo SINE Alu -173 139 1 1613 199 3 7 chr17 3866351 3866643 -81571837 + AluJo SINE Alu 16 306 -6 2061 104 0 17 chr17 3866647 3866983 -81571497 + AluSq SINE Alu 1 331 0 345 255 120 32 chr17 3867187 3867403 -81571077 + L1MCa LINE L1 2469 2703 -3723 689 161 36 0 chr17 3867422 3867534 -81570946 + FLAM_A SINE Alu 1 116 -17 317 205 12 36 chr17 3867619 3867702 -81570778 + L1M4 LINE L1 5192 5272 -874 1596 183 47 9 chr17 3867848 3868192 -81570288 - L1M4 LINE L1 -1895 4251 3895 1046 160 28 0 chr17 3868196 3868377 -81570103 - AluSg/x SINE Alu -5 305 120 367 220 0 55 chr17 3868378 3868469 -81570011 - L1M4 LINE L1 -2277 3869 3784 2374 107 0 3 chr17 3868471 3868780 -81569700 - AluSx SINE Alu -4 308 1 2282 116 3 0 chr17 3868791 3869094 -81569386 - AluSp SINE Alu -9 304 1 375 137 0 3 chr17 3869114 3869185 -81569295 + MLT1F LTR MaLR 481 591 -4 2312 113 0 10 chr17 3869866 3870175 -81568305 - AluSx SINE Alu -6 306 1 335 293 188 17 chr17 3870294 3870533 -81567947 - L2 LINE L2 -4 3268 2989 2529 62 0 0 chr17 3870815 3871107 -81567373 - AluY SINE Alu -19 292 1 2208 125 0 3 chr17 3871284 3871589 -81566891 - AluSx SINE Alu -2 310 7 1218 160 18 36 chr17 3871597 3871816 -81566664 - AluJo SINE Alu -1 311 97 2415 87 6 3 chr17 3871971 3872282 -81566198 - AluSx SINE Alu 0 312 1 613 257 11 0 chr17 3872361 3872536 -81565944 - MER104 DNA MER2_type -3 177 1 1089 249 113 32 chr17 3872597 3873135 -81565345 - HAL1b LINE L1 -728 620 39 2038 98 18 4 chr17 3873326 3873602 -81564878 + AluSx SINE Alu 20 299 -13 923 184 17 17 chr17 3873901 3874075 -81564405 + AluJo SINE Alu 121 294 -18 2269 101 7 0 chr17 3874315 3874611 -81563869 - AluY SINE Alu -13 298 1 1086 92 14 0 chr17 3874613 3874755 -81563725 - AluSq/x SINE Alu -169 144 1 252 294 160 50 chr17 3875091 3875210 -81563270 - L2 LINE L2 0 3272 3141 414 245 152 22 chr17 3875538 3875722 -81562758 - L2 LINE L2 -456 2858 2651 533 63 76 13 chr17 3876252 3876331 -81562149 - AluS SINE Alu -228 85 2 306 0 0 0 chr17 3876570 3876604 -81561876 + (CA)n Simple_repeat Simple_repeat 2 35 0 2173 116 0 56 chr17 3876679 3876998 -81561482 + AluSq SINE Alu 7 307 -6 381 222 46 52 chr17 3877198 3877213 -81561267 - Charlie2a DNA MER1_type -12 2850 2836 858 143 0 8 chr17 3877213 3877346 -81561134 - FLAM_C SINE Alu 0 133 2 381 222 46 52 chr17 3877346 3877483 -81560997 - Charlie2a DNA MER1_type -26 2836 2699 * 599 221 32 32 chr17 3877477 3877667 -81560813 - Charlie2a DNA MER1_type -1206 1656 1467 797 259 62 35 chr17 3877862 3878152 -81560328 - Charlie2a DNA MER1_type -2481 301 4 2472 80 0 6 chr17 3879162 3879475 -81559005 + AluSq SINE Alu 1 311 -2 234 62 0 0 chr17 3879615 3879647 -81558833 + (CA)n Simple_repeat Simple_repeat 1 32 0 321 259 129 17 chr17 3880216 3880332 -81558148 - MIR SINE MIR -90 172 44 2263 104 0 3 chr17 3880505 3880803 -81557677 + AluY SINE Alu 5 301 -10 34 24 0 0 chr17 3880878 3880919 -81557561 + AT_rich Low_complexity Low_complexity 1 41 0 1323 144 5 5 chr17 3881070 3881345 -81557135 + AluSx SINE Alu 1 211 -101 1797 156 32 3 chr17 3881347 3881630 -81556850 + AluSx SINE Alu 7 297 -15 408 288 18 9 chr17 3881630 3881741 -81556739 - MIR SINE MIR -131 131 20 781 206 0 0 chr17 3881759 3881885 -81556595 - FLAM_A SINE Alu -7 126 1 2272 182 42 24 chr17 3881897 3882191 -81556289 - L1MB5 LINE L1 0 6174 5866 2250 119 0 3 chr17 3882191 3882494 -81555986 - AluSx SINE Alu -10 302 1 2272 182 42 24 chr17 3882494 3882704 -81555776 - L1MB5 LINE L1 -308 5866 5661 1455 153 0 36 chr17 3882704 3882953 -81555527 - AluSx SINE Alu 0 310 71 * 2442 91 0 0 chr17 3882951 3883248 -81555232 - AluY SINE Alu -14 297 1 416 133 0 0 chr17 3883250 3883310 -81555170 - AluSx SINE Alu -232 80 21 2254 117 0 7 chr17 3883332 3883640 -81554840 - AluSg SINE Alu -4 306 1 1685 153 40 45 chr17 3883640 3883914 -81554566 - L1MB5 LINE L1 -513 5667 5394 2247 143 0 0 chr17 3883914 3884222 -81554258 - AluSg SINE Alu -2 308 1 1685 153 40 45 chr17 3884222 3884299 -81554181 - L1MB5 LINE L1 -786 5394 5318 1052 182 0 0 chr17 3884311 3884470 -81554010 - FRAM SINE Alu -17 159 1 1379 243 127 83 chr17 3884513 3884850 -81553630 - L1MC4 LINE L1 0 8042 7721 2471 90 0 10 chr17 3884850 3885162 -81553318 - AluSg SINE Alu -1 309 1 1379 243 127 83 chr17 3885162 3885209 -81553271 - L1MC4 LINE L1 -321 7721 7678 2345 102 3 0 chr17 3885209 3885504 -81552976 - AluSp SINE Alu -17 296 1 1379 243 127 83 chr17 3885504 3885627 -81552853 - L1MC4 LINE L1 -364 7678 7562 1756 137 10 73 chr17 3885627 3885940 -81552540 - AluJb SINE Alu -19 293 1 1379 243 127 83 chr17 3885940 3886234 -81552246 - L1MC4 LINE L1 -480 7562 7204 902 136 0 0 chr17 3887191 3887309 -81551171 + AluJo/FLAM SINE Alu 1 118 -194 2467 74 0 35 chr17 3887309 3887621 -81550859 - AluSx SINE Alu -11 301 1 2249 102 10 0 chr17 3887621 3887915 -81550565 - AluSx SINE Alu -15 297 1 24 0 0 0 chr17 3887928 3887952 -81550528 + AT_rich Low_complexity Low_complexity 1 24 0 662 192 172 0 chr17 3888068 3888219 -81550261 - MIR SINE MIR -69 193 17 2180 98 26 16 chr17 3888414 3888719 -81549761 - AluSx SINE Alu -1 311 4 2653 43 3 0 chr17 3888727 3889028 -81549452 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 3889409 3889432 -81549048 + AT_rich Low_complexity Low_complexity 1 23 0 2004 134 10 0 chr17 3889560 3889850 -81548630 - AluSq SINE Alu -12 301 9 882 153 14 28 chr17 3889853 3889997 -81548483 - AluSg/x SINE Alu -46 266 125 1005 188 62 19 chr17 3890170 3890378 -81548102 - MER20 DNA MER1_type -2 217 1 1996 104 6 71 chr17 3890717 3891043 -81547437 - AluSx SINE Alu -7 305 1 263 222 19 0 chr17 3891091 3891145 -81547335 - MIR SINE MIR -8 254 200 2242 126 0 0 chr17 3891146 3891455 -81547025 - AluSx SINE Alu -3 309 1 2072 145 0 3 chr17 3891464 3891760 -81546720 - AluSx SINE Alu -17 295 1 2278 93 3 3 chr17 3891781 3892070 -81546410 - AluSp SINE Alu -24 289 1 2105 99 58 3 chr17 3892818 3893111 -81545369 - AluSc SINE Alu 0 309 1 2297 108 6 10 chr17 3893715 3894029 -81544451 - AluSp SINE Alu 0 313 1 767 237 53 4 chr17 3894035 3894263 -81544217 + L1MD2 LINE L1 5089 5327 -819 804 213 0 18 chr17 3894263 3894427 -81544053 + FRAM SINE Alu 1 154 -22 1224 178 19 16 chr17 3894427 3894685 -81543795 + L1MD2 LINE L1 5324 5582 -777 22 0 0 0 chr17 3894742 3894764 -81543716 + AT_rich Low_complexity Low_complexity 1 22 0 844 161 0 0 chr17 3894764 3894882 -81543598 - FLAM_C SINE Alu -25 118 1 506 68 0 0 chr17 3894884 3894957 -81543523 - AluSp/q SINE Alu -13 300 228 713 175 186 5 chr17 3894990 3895184 -81543296 + L1MD2 LINE L1 5920 6148 -211 1290 135 122 16 chr17 3895230 3895475 -81543005 - MER44D DNA MER2_type 0 605 280 425 168 22 29 chr17 3895480 3895582 -81542898 - MER44D DNA MER2_type -532 173 72 195 250 17 17 chr17 3895927 3895987 -81542493 + MIR SINE MIR 6 65 -197 2293 99 3 3 chr17 3895989 3896291 -81542189 - AluSq SINE Alu -11 302 1 1816 96 12 0 chr17 3896309 3896549 -81541931 + AluSp SINE Alu 54 296 -17 1400 184 52 42 chr17 3896598 3896907 -81541573 - AluJo SINE Alu 0 312 1 1852 110 43 7 chr17 3897142 3897443 -81541037 + THE1C LTR MaLR 63 374 -1 561 139 0 30 chr17 3897454 3897555 -81540925 - FLAM_C SINE Alu -6 137 40 207 0 0 0 chr17 3897581 3897604 -81540876 + (A)n Simple_repeat Simple_repeat 1 23 0 248 267 43 26 chr17 3897888 3898004 -81540476 - MIR SINE MIR -10 252 135 2858 237 112 60 chr17 3898020 3899033 -81539447 + L2 LINE L2 1466 2558 -756 1163 172 200 4 chr17 3899033 3899283 -81539197 + AluJo SINE Alu 1 299 -3 2858 237 112 60 chr17 3899283 3899527 -81538953 + L2 LINE L2 2558 2788 -526 215 235 24 24 chr17 3899558 3899643 -81538837 + L2 LINE L2 2887 2971 -301 306 268 104 45 chr17 3899655 3899875 -81538605 + L2 LINE L2 3081 3313 0 473 101 0 0 chr17 3899995 3900064 -81538416 + AluSq SINE Alu 2 70 -242 888 149 0 37 chr17 3900064 3900225 -81538255 + AluSp/q SINE Alu 159 313 0 1528 155 76 49 chr17 3900231 3900535 -81537945 + AluJo SINE Alu 1 312 0 239 30 0 0 chr17 3900836 3900869 -81537611 - L1PA16 LINE L1 -5 6161 6129 2525 80 0 3 chr17 3902070 3902381 -81536099 - AluSg SINE Alu 0 310 1 312 289 11 11 chr17 3902440 3902530 -81535950 - L2 LINE L2 -4 3268 3179 2408 81 0 35 chr17 3902746 3903056 -81535424 + AluSx SINE Alu 1 299 -13 2343 78 26 3 chr17 3903706 3904012 -81534468 - AluSq SINE Alu 0 313 1 328 380 0 0 chr17 3904277 3904406 -81534074 + MIR SINE MIR 21 149 -113 604 200 50 0 chr17 3904560 3904685 -81533795 + MER53 DNA DNA 2 139 -50 2012 132 4 0 chr17 3904685 3904991 -81533489 + AluSx SINE Alu 1 307 0 604 200 50 0 chr17 3904991 3905024 -81533456 + MER53 DNA DNA 139 169 -20 1359 168 0 42 chr17 3905024 3905262 -81533218 - AluJb SINE Alu -1 311 84 920 147 0 0 chr17 3905415 3905551 -81532929 + AluSg/x SINE Alu 174 309 -1 201 39 0 0 chr17 3905551 3905577 -81532903 + (GA)n Simple_repeat Simple_repeat 1 26 0 726 62 0 0 chr17 3905577 3905673 -81532807 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 2050 134 3 13 chr17 3906684 3906982 -81531498 - AluSq SINE Alu -18 295 1 2070 105 14 27 chr17 3907029 3907346 -81531134 - AluSp SINE Alu 0 313 1 270 0 0 0 chr17 3907348 3907378 -81531102 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1804 83 9 0 chr17 3907378 3907607 -81530873 - AluSg1 SINE Alu -29 280 50 982 107 0 0 chr17 3907607 3907738 -81530742 - AluSq/x SINE Alu -178 135 5 1270 132 5 44 chr17 3907851 3908087 -81530393 - AluJb SINE Alu 0 312 85 659 255 25 45 chr17 3908101 3908301 -81530179 + L1MC4a LINE L1 5512 5707 -2101 2516 82 0 13 chr17 3908301 3908618 -81529862 - AluSp SINE Alu 0 313 1 873 58 0 0 chr17 3908629 3908732 -81529748 - AluY SINE Alu -23 288 186 379 230 168 16 chr17 3908732 3908923 -81529557 + L1MC4a LINE L1 5704 5923 -1885 1749 125 95 8 chr17 3908941 3909229 -81529251 + AluSg SINE Alu 1 310 0 1763 152 48 21 chr17 3909235 3909524 -81528956 + AluJb SINE Alu 1 297 -15 2452 82 0 0 chr17 3909530 3909824 -81528656 + AluSc SINE Alu 1 294 -15 198 0 0 0 chr17 3909836 3909858 -81528622 + (CA)n Simple_repeat Simple_repeat 2 23 0 282 303 33 33 chr17 3910135 3910257 -81528223 + MIR3 SINE MIR 73 194 -14 2351 89 7 10 chr17 3910301 3910605 -81527875 + AluSx SINE Alu 1 303 -9 2019 119 20 0 chr17 3910605 3910898 -81527582 + AluSx SINE Alu 1 300 -12 249 255 224 0 chr17 3911550 3911648 -81526832 + MIR3 SINE MIR 36 155 -53 221 246 0 18 chr17 3911637 3911694 -81526786 + MER5A DNA MER1_type 112 167 -22 * 2137 116 3 3 chr17 3911711 3912005 -81526475 - AluSx SINE Alu -18 294 1 279 219 0 0 chr17 3912212 3912253 -81526227 + A-rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr17 3912260 3912282 -81526198 + GC_rich Low_complexity Low_complexity 1 22 0 23 40 0 0 chr17 3912340 3912365 -81526115 + GC_rich Low_complexity Low_complexity 1 25 0 241 328 0 0 chr17 3912367 3912428 -81526052 + A-rich Low_complexity Low_complexity 1 61 0 2245 101 0 26 chr17 3912936 3913244 -81525236 - AluSx SINE Alu -12 300 1 2421 90 0 3 chr17 3914097 3914398 -81524082 - AluSq SINE Alu -13 300 1 319 273 159 8 chr17 3915011 3915143 -81523337 + MIR3 SINE MIR 37 163 -45 334 297 69 40 chr17 3915840 3916022 -81522458 + MIR3 SINE MIR 18 205 -31 216 300 142 17 chr17 3916335 3916455 -81522025 + L3 LINE CR1 1332 1466 -111 203 189 34 11 chr17 3917772 3917831 -81520649 + MIR SINE MIR 104 161 -101 195 302 47 0 chr17 3918242 3918348 -81520132 + MIR SINE MIR 23 133 -75 203 83 28 28 chr17 3918954 3918990 -81519490 + (TCC)n Simple_repeat Simple_repeat 3 38 0 458 203 30 0 chr17 3918991 3919124 -81519356 + CT-rich Low_complexity Low_complexity 2 138 0 1123 165 6 0 chr17 3919131 3919301 -81519179 - AluJb SINE Alu -7 305 135 224 30 30 0 chr17 3919302 3919335 -81519145 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2009 125 0 41 chr17 3919335 3919630 -81518850 - AluSq SINE Alu -30 283 1 1555 89 0 15 chr17 3919960 3920162 -81518318 - AluSc SINE Alu 0 309 111 1980 129 0 37 chr17 3920384 3920701 -81517779 - AluSx SINE Alu 0 306 1 237 286 98 0 chr17 3920740 3920842 -81517638 + MIR SINE MIR 28 137 -71 1111 156 78 0 chr17 3920854 3921033 -81517447 - AluJo SINE Alu -47 265 73 304 308 108 8 chr17 3922130 3922168 -81516312 - MIR SINE MIR -110 152 119 1835 113 109 22 chr17 3922168 3922443 -81516037 + AluSg SINE Alu 1 299 -11 304 308 108 8 chr17 3922443 3922524 -81515956 - MIR SINE MIR -143 119 21 183 239 0 0 chr17 3922608 3922654 -81515826 - MIR SINE MIR -112 150 105 236 309 57 16 chr17 3922777 3922900 -81515580 + L2 LINE L2 2923 3050 -222 2462 77 0 26 chr17 3923413 3923724 -81514756 - AluSg SINE Alu -7 303 1 2381 92 0 0 chr17 3923724 3924016 -81514464 - AluSx SINE Alu -20 292 1 270 155 48 95 chr17 3924781 3924834 -81513646 - FLAM SINE Alu -179 123 84 1580 141 0 0 chr17 3924834 3925054 -81513426 - AluJo SINE Alu -92 220 1 270 155 48 95 chr17 3925054 3925084 -81513396 - FLAM SINE Alu -218 84 54 1078 130 59 18 chr17 3925309 3925498 -81512982 - AluSg/x SINE Alu 0 312 121 2384 113 0 0 chr17 3925507 3925818 -81512662 - AluSx SINE Alu -1 311 1 1973 169 0 0 chr17 3925913 3926214 -81512266 + AluJo SINE Alu 1 301 -11 216 0 0 0 chr17 3927566 3927590 -81510890 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 2228 103 7 0 chr17 3927812 3928122 -81510358 + AluSx SINE Alu 1 312 0 2057 116 10 42 chr17 3928141 3928452 -81510028 + AluSx SINE Alu 1 301 -11 204 250 36 27 chr17 3928458 3928570 -81509910 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 290 250 50 0 chr17 3929251 3929331 -81509149 + MIR SINE MIR 82 165 -97 2426 85 3 3 chr17 3929369 3929676 -81508804 - AluSq SINE Alu -6 307 1 1088 248 131 65 chr17 3929681 3930141 -81508339 - MLT1G1 LTR MaLR 0 595 90 1788 172 3 3 chr17 3930141 3930437 -81508043 + AluSx SINE Alu 1 296 -16 1088 248 131 65 chr17 3930437 3930532 -81507948 - MLT1G1 LTR MaLR -505 90 3 801 247 128 45 chr17 3930821 3930955 -81507525 - L2 LINE L2 -1 3312 3191 2400 101 0 0 chr17 3930955 3931252 -81507228 + AluSg SINE Alu 1 297 -13 2213 106 3 10 chr17 3931253 3931555 -81506925 + AluSx SINE Alu 1 300 -12 801 247 128 45 chr17 3931555 3931975 -81506505 - L2 LINE L2 -121 3192 2708 441 293 105 38 chr17 3931980 3932352 -81506128 - MLT1H LTR MaLR 0 549 153 1916 119 10 17 chr17 3932369 3932664 -81505816 - AluSx SINE Alu -19 293 1 249 273 0 91 chr17 3932664 3932785 -81505695 - MLT1H LTR MaLR -419 123 14 1432 195 18 131 chr17 3932798 3932852 -81505628 - L2 LINE L2 -607 2707 2649 617 184 22 44 chr17 3932852 3932988 -81505492 + FLAM_C SINE Alu 1 133 0 1432 195 18 131 chr17 3932988 3933385 -81505095 - L2 LINE L2 -665 2649 2307 850 63 16 8 chr17 3933390 3933516 -81504964 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2015 96 7 4 chr17 3933517 3933797 -81504683 - AluSq SINE Alu -32 281 1 1902 134 0 7 chr17 3933806 3934096 -81504384 - AluJb SINE Alu -24 288 1 1429 127 0 9 chr17 3934138 3934351 -81504129 + AluSg/x SINE Alu 93 303 -9 388 141 343 20 chr17 3934351 3934450 -81504030 - L2 LINE L2 -1020 2294 2164 1009 132 18 150 chr17 3934817 3934859 -81503621 - L1MB8 LINE L1 0 6184 6138 2115 105 3 0 chr17 3934859 3935145 -81503335 + AluSx SINE Alu 3 289 -23 1009 132 18 150 chr17 3935145 3935428 -81503052 - L1MB8 LINE L1 -46 6138 5902 751 248 34 41 chr17 3935504 3935635 -81502845 - HAL1b LINE L1 -451 897 767 2228 106 3 0 chr17 3935635 3935936 -81502544 - AluSp SINE Alu -11 302 1 751 248 34 41 chr17 3935936 3936099 -81502381 - HAL1b LINE L1 -581 767 605 2101 141 0 0 chr17 3936166 3936478 -81502002 - AluJb SINE Alu 0 312 1 2269 87 3 3 chr17 3936573 3936871 -81501609 - AluSx SINE Alu -14 298 1 180 111 0 0 chr17 3936894 3936921 -81501559 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1914 148 19 16 chr17 3937489 3937800 -81500680 - AluJb SINE Alu 0 312 1 1900 122 37 10 chr17 3938103 3938399 -81500081 - AluSq SINE Alu -9 304 1 229 351 0 6 chr17 3939629 3939803 -81498677 + (TG)n Simple_repeat Simple_repeat 1 173 0 253 354 54 0 chr17 3940647 3940777 -81497703 - MIR3 SINE MIR -9 199 63 2313 95 0 9 chr17 3942666 3942981 -81495499 - AluSx SINE Alu 0 312 1 424 293 38 15 chr17 3943506 3943639 -81494841 - MIR SINE MIR -38 170 35 2214 92 7 0 chr17 3943656 3943950 -81494530 - AluSq SINE Alu -17 296 1 700 269 23 0 chr17 3944429 3944604 -81493876 + MIR SINE MIR 23 201 -61 212 254 18 0 chr17 3944746 3944801 -81493679 - L3 LINE CR1 -102 1475 1420 255 250 157 0 chr17 3944941 3945051 -81493429 + MIR SINE MIR 38 172 -63 264 204 0 0 chr17 3945239 3945293 -81493187 - L3 LINE CR1 -291 1286 1233 339 282 183 12 chr17 3945710 3946033 -81492447 - L2 LINE L2 -1437 1877 1500 494 261 17 52 chr17 3946301 3946511 -81491969 + MIR SINE MIR 5 203 -59 2332 91 3 0 chr17 3946585 3946892 -81491588 - AluSc SINE Alu -1 308 1 197 307 85 53 chr17 3946930 3946977 -81491503 - L3 LINE CR1 -3 1574 1530 581 256 26 37 chr17 3946977 3947168 -81491312 - MER5A DNA MER1_type 0 189 1 197 307 85 53 chr17 3947168 3947309 -81491171 - L3 LINE CR1 -47 1530 1380 576 282 164 14 chr17 3948796 3949016 -81489464 + MIR SINE MIR 2 254 -8 2187 127 0 0 chr17 3949019 3949327 -81489153 - AluSx SINE Alu -4 308 1 279 294 104 31 chr17 3949712 3949875 -81488605 - L2 LINE L2 -172 3100 2926 497 313 38 0 chr17 3949954 3950091 -81488389 - MIR SINE MIR -89 173 28 2313 90 6 0 chr17 3950091 3950402 -81488078 - AluSq SINE Alu 0 313 1 497 313 38 0 chr17 3950402 3950424 -81488056 - MIR SINE MIR -234 28 8 1420 267 91 9 chr17 3951383 3951598 -81486882 - L2 LINE L2 -1 3312 3116 2286 87 13 0 chr17 3951598 3951898 -81486582 + AluSg SINE Alu 1 304 -6 1420 267 91 9 chr17 3951898 3952435 -81486045 - L2 LINE L2 -197 3116 2500 2222 103 10 0 chr17 3953134 3953435 -81485045 - AluSq SINE Alu -9 304 1 1740 162 7 23 chr17 3954437 3954746 -81483734 + AluSx SINE Alu 1 304 -8 2263 75 17 0 chr17 3955836 3956129 -81482351 - AluSp SINE Alu -15 298 1 917 139 0 7 chr17 3956130 3956267 -81482213 - AluSq/x SINE Alu -177 136 1 252 314 25 16 chr17 3956550 3956671 -81481809 - LTR67 LTR ERVL -2 555 434 2198 112 26 0 chr17 3956915 3957220 -81481260 + AluSp SINE Alu 1 313 0 214 365 52 26 chr17 3957265 3957380 -81481100 + MIR3 SINE MIR 89 206 -2 450 253 106 88 chr17 3957812 3958085 -81480395 - L2 LINE L2 0 3272 2995 2322 64 0 10 chr17 3958413 3958708 -81479772 - AluY SINE Alu -19 292 1 199 211 0 0 chr17 3959616 3959654 -81478826 - MIR SINE MIR -62 146 109 358 252 17 50 chr17 3960051 3960170 -81478310 - MIR SINE MIR -64 144 30 21 36 0 0 chr17 3960998 3961026 -81477454 + GC_rich Low_complexity Low_complexity 1 28 0 304 183 25 33 chr17 3961174 3961294 -81477186 + (CCG)n Simple_repeat Simple_repeat 1 119 0 34 0 0 0 chr17 3961328 3961362 -81477118 + GC_rich Low_complexity Low_complexity 1 34 0 331 303 38 23 chr17 3962233 3962365 -81476115 + MIR3 SINE MIR 23 156 -52 266 385 96 0 chr17 3962587 3962722 -81475758 - MIR3 SINE MIR -13 195 48 494 278 14 4 chr17 3963706 3963862 -81474618 - MIR3 SINE MIR -61 147 3 2388 84 3 0 chr17 3963979 3964289 -81474191 + AluSx SINE Alu 1 311 -1 435 268 43 0 chr17 3964378 3964516 -81473964 + MER103 DNA DNA 21 164 -2 625 175 0 58 chr17 3964710 3964830 -81473650 - AluJo SINE Alu -11 301 189 1975 110 40 0 chr17 3964849 3965121 -81473359 + AluSx SINE Alu 2 284 -28 262 204 0 0 chr17 3965213 3965267 -81473213 + AluJ/monomer SINE Alu 248 301 -1 21 36 0 0 chr17 3965267 3965295 -81473185 + AT_rich Low_complexity Low_complexity 1 28 0 931 169 42 0 chr17 3965324 3965490 -81472990 - AluJo SINE Alu -125 187 15 495 350 104 30 chr17 3965506 3965929 -81472551 + L2 LINE L2 2195 2668 -646 2304 93 0 3 chr17 3965929 3966231 -81472249 - AluSx SINE Alu -11 301 1 495 350 104 30 chr17 3966231 3966347 -81472133 + L2 LINE L2 2668 2774 -540 906 71 0 0 chr17 3966362 3966475 -81472005 + AluSc SINE Alu 1 113 -196 4588 56 15 7 chr17 3966586 3967306 -81471174 + SVA Other Other 316 1157 -229 1061 117 111 6 chr17 3967331 3967502 -81470978 + AluSg/x SINE Alu 102 290 -20 887 299 95 50 chr17 3969991 3970436 -81468044 + HAL1 LINE L1 1060 1558 -949 1806 169 0 0 chr17 3970436 3970731 -81467749 - AluJo SINE Alu -13 299 5 887 299 95 50 chr17 3970731 3971073 -81467407 + HAL1 LINE L1 1558 1883 -624 21 0 0 0 chr17 3971121 3971142 -81467338 + AT_rich Low_complexity Low_complexity 1 21 0 2309 66 7 0 chr17 3971149 3971438 -81467042 + AluY SINE Alu 1 291 -20 200 136 0 68 chr17 3971576 3971620 -81466860 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2065 67 32 21 chr17 3971856 3972141 -81466339 + AluSp SINE Alu 1 288 -25 762 80 0 0 chr17 3972250 3972350 -81466130 + AluSg/x SINE Alu 196 295 -15 2242 102 3 3 chr17 3972482 3972795 -81465685 + AluSp SINE Alu 1 313 0 1975 131 7 0 chr17 3972801 3973091 -81465389 + AluSx SINE Alu 1 292 -20 3945 128 134 43 chr17 3973230 3974641 -81463839 - pTR5 LTR ERV1 0 2438 742 542 189 23 23 chr17 3974708 3974840 -81463640 - LTR45 LTR ERV1 0 525 394 2248 41 24 10 chr17 3974880 3975173 -81463307 + AluY SINE Alu 1 297 -14 2196 240 121 40 chr17 3975528 3975721 -81462759 + HAL1 LINE L1 261 437 -2070 2196 86 0 0 chr17 3975721 3976028 -81462452 + AluSg SINE Alu 1 307 0 2196 240 121 40 chr17 3976028 3976944 -81461536 + HAL1 LINE L1 437 1460 -1047 24 0 0 0 chr17 3976944 3976968 -81461512 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr17 3977173 3977205 -81461275 + AT_rich Low_complexity Low_complexity 1 32 0 1331 34 0 53 chr17 3977844 3978053 -81460427 - SVA Other Other -1188 198 1 2296 94 0 7 chr17 3978090 3978399 -81460081 - AluSx SINE Alu -5 307 1 2130 119 0 34 chr17 3979718 3980038 -81458442 - AluSx SINE Alu -3 309 1 271 287 104 9 chr17 3980045 3980160 -81458320 + L2 LINE L2 2400 2525 -789 212 355 86 0 chr17 3980190 3980283 -81458197 - L2 LINE L2 -4 3309 3209 405 0 0 0 chr17 3980308 3980353 -81458127 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 287 73 45 chr17 3980528 3980775 -81457705 - L2 LINE L2 -1040 2274 2021 322 237 29 58 chr17 3980911 3981050 -81457430 + MIR3 SINE MIR 1 135 -73 25 65 0 0 chr17 3983421 3983467 -81455013 + GC_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr17 3983877 3983898 -81454582 + GC_rich Low_complexity Low_complexity 1 21 0 258 32 0 0 chr17 3985483 3985514 -81452966 + (GA)n Simple_repeat Simple_repeat 2 32 0 239 338 64 39 chr17 3985814 3986048 -81452432 - L2 LINE L2 -905 2409 2170 245 340 32 53 chr17 3987760 3987948 -81450532 + MIR3 SINE MIR 5 188 -20 218 284 154 79 chr17 3988724 3988925 -81449555 + L2 LINE L2 1796 1981 -1333 2441 87 0 0 chr17 3988925 3989237 -81449243 - AluSx SINE Alu 0 312 1 218 284 154 79 chr17 3989237 3989595 -81448885 + L2 LINE L2 1980 2397 -917 242 388 165 0 chr17 3989967 3990173 -81448307 + L2 LINE L2 2938 3177 -95 240 357 29 53 chr17 3990424 3990595 -81447885 + MIR SINE MIR 74 240 -22 278 270 79 53 chr17 3990604 3990756 -81447724 - MIR3 SINE MIR -50 158 3 244 236 0 42 chr17 3991593 3991665 -81446815 + L3 LINE CR1 1401 1469 -108 182 189 0 0 chr17 3991765 3991802 -81446678 - L2 LINE L2 -208 3064 3028 2079 112 0 3 chr17 3993137 3993471 -81445009 + AluSx SINE Alu 1 333 0 275 239 147 91 chr17 3995207 3995492 -81442988 - L2 LINE L2 -22 3250 2950 360 256 103 0 chr17 3996400 3996517 -81441963 - MIR3 SINE MIR -22 186 58 330 260 30 0 chr17 3996923 3997023 -81441457 - LTR33 LTR ERVL -2 519 417 448 304 131 0 chr17 3997097 3997311 -81441169 - LTR33 LTR ERVL -239 282 41 2022 128 3 3 chr17 3997512 3997810 -81440670 + AluSx SINE Alu 1 298 -14 251 197 0 45 chr17 3997879 3997945 -81440535 + (CCCCAG)n Simple_repeat Simple_repeat 2 64 0 1701 181 0 20 chr17 4000097 4000396 -81438084 + AluJb SINE Alu 1 293 -19 244 281 25 8 chr17 4000401 4000478 -81438002 + HAL1b LINE L1 1226 1300 -48 291 28 0 0 chr17 4000478 4000514 -81437966 + (ATTG)n Simple_repeat Simple_repeat 4 39 0 1800 153 14 0 chr17 4000515 4000790 -81437690 - AluJo SINE Alu -33 279 1 244 281 25 8 chr17 4000790 4000831 -81437649 + HAL1b LINE L1 1299 1348 0 553 155 124 72 chr17 4000995 4001189 -81437291 - MER46A DNA MER2_type -1 235 32 2415 87 0 0 chr17 4001282 4001593 -81436887 - AluSq SINE Alu -2 311 1 658 51 0 0 chr17 4001593 4001672 -81436808 - AluSq/x SINE Alu -177 135 57 527 354 134 29 chr17 4002084 4002561 -81435919 + L3 LINE CR1 1001 1527 -50 2298 119 0 0 chr17 4002804 4003115 -81435365 - AluSx SINE Alu -1 311 1 2197 101 7 0 chr17 4003644 4003941 -81434539 - AluSx SINE Alu -13 299 1 2007 134 7 3 chr17 4004125 4004431 -81434049 - AluJb SINE Alu -5 307 1 548 314 105 0 chr17 4004439 4004630 -81433850 - MIR SINE MIR -10 252 42 2294 80 3 13 chr17 4005092 4005392 -81433088 - AluSx SINE Alu -15 297 1 1387 180 3 42 chr17 4005574 4005697 -81432783 + AluJo SINE Alu 21 147 -165 2281 86 0 19 chr17 4005697 4006011 -81432469 + AluSq SINE Alu 1 308 -5 1387 180 3 42 chr17 4006011 4006171 -81432309 + AluJo SINE Alu 147 293 -19 1521 194 33 0 chr17 4009479 4009778 -81428702 + AluJb SINE Alu 1 308 0 2365 85 0 0 chr17 4010090 4010397 -81428083 - AluSx SINE Alu -5 307 1 611 68 0 0 chr17 4010668 4010742 -81427738 + AluSp/q SINE Alu 216 289 -24 2117 102 0 32 chr17 4010752 4011067 -81427413 + AluY SINE Alu 1 305 -6 343 276 95 9 chr17 4011096 4011306 -81427174 - L1MC4a LINE L1 -1555 6253 6026 2226 91 44 0 chr17 4011388 4011685 -81426795 - AluSq SINE Alu -3 310 1 611 68 0 0 chr17 4011695 4011769 -81426711 - AluSp/q SINE Alu -24 289 216 868 126 47 126 chr17 4012448 4012614 -81425866 - Charlie5 DNA MER1_type 0 2585 2448 2245 83 3 17 chr17 4012614 4012916 -81425564 + AluSx SINE Alu 1 298 -14 868 126 47 126 chr17 4012916 4013026 -81425454 - Charlie5 DNA MER1_type -137 2448 2331 275 357 170 6 chr17 4013079 4013261 -81425219 + MIR SINE MIR 45 256 -6 205 282 103 0 chr17 4013618 4013696 -81424784 - MIR SINE MIR -62 146 61 199 250 225 15 chr17 4014518 4014643 -81423837 - MIR SINE MIR -68 140 19 180 345 58 23 chr17 4015533 4015620 -81422860 + L2 LINE L2 2987 3076 -196 1051 216 11 42 chr17 4017939 4018203 -81420277 - MIR SINE MIR 0 262 7 345 294 43 49 chr17 4018826 4018989 -81419491 + MER5A DNA MER1_type 24 185 -4 208 306 69 0 chr17 4018980 4019052 -81419428 - MIR3 SINE MIR -39 169 93 * 1027 166 0 0 chr17 4019811 4019974 -81418506 + AluJb SINE Alu 134 296 -16 216 365 78 17 chr17 4019983 4020213 -81418267 - L2 LINE L2 -1544 1770 1527 195 222 37 19 chr17 4020944 4020998 -81417482 - L2 LINE L2 -212 3060 3006 307 310 77 36 chr17 4021389 4021558 -81416922 + MIR3 SINE MIR 3 183 -63 230 337 12 0 chr17 4021767 4021850 -81416630 - L2 LINE L2 -213 3059 2976 384 282 46 23 chr17 4022460 4022591 -81415889 + MIR SINE MIR 66 199 -63 357 281 0 0 chr17 4023152 4023287 -81415193 + (TG)n Simple_repeat Simple_repeat 1 135 0 294 414 37 0 chr17 4025762 4025924 -81412556 - MIR SINE MIR -59 203 36 2339 99 0 3 chr17 4026551 4026864 -81411616 + AluSx SINE Alu 1 312 0 370 325 20 54 chr17 4026982 4027185 -81411295 - L2 LINE L2 -85 3187 2992 227 222 22 74 chr17 4027239 4027374 -81411106 + L1MEd LINE L1 73 200 -5919 295 178 22 44 chr17 4027444 4027534 -81410946 - L1MC5 LINE L1 -35 7926 7839 783 304 66 68 chr17 4027767 4027896 -81410584 + L1MEd LINE L1 583 711 -5408 2173 86 10 3 chr17 4027896 4028188 -81410292 + AluSq SINE Alu 1 294 -19 783 304 66 68 chr17 4028188 4028544 -81409936 + L1MEd LINE L1 711 1067 -5052 188 391 30 17 chr17 4028610 4028763 -81409717 - L2 LINE L2 -455 2859 2701 2539 52 3 0 chr17 4028763 4029073 -81409407 + AluY SINE Alu 1 311 0 188 391 30 17 chr17 4029073 4029149 -81409331 - L2 LINE L2 -613 2701 2627 322 263 30 20 chr17 4030586 4030685 -81407795 + MIR3 SINE MIR 56 155 -53 428 230 135 32 chr17 4031243 4031369 -81407111 + MIR SINE MIR 13 151 -111 247 375 0 0 chr17 4031552 4031656 -81406824 + L2 LINE L2 2988 3091 -181 460 306 61 25 chr17 4031970 4032078 -81406402 - MIR SINE MIR -24 238 118 1874 207 39 42 chr17 4032078 4032437 -81406043 - MER63B DNA MER1_type -629 433 74 2175 105 0 0 chr17 4032437 4032733 -81405747 + AluSx SINE Alu 1 296 -16 1874 207 39 42 chr17 4032733 4032807 -81405673 - MER63B DNA MER1_type -988 74 1 460 306 61 25 chr17 4032807 4032894 -81405586 - MIR SINE MIR -144 118 36 227 191 32 32 chr17 4033056 4033119 -81405361 + CT-rich Low_complexity Low_complexity 1 63 0 937 275 53 77 chr17 4033419 4033677 -81404803 + L2 LINE L2 2702 2964 -349 2053 107 3 10 chr17 4033677 4033975 -81404505 + AluSx SINE Alu 1 296 -16 937 275 53 77 chr17 4033975 4034006 -81404474 + L2 LINE L2 2964 2994 -319 1751 111 96 4 chr17 4034006 4034276 -81404204 + AluSx SINE Alu 1 295 -17 937 275 53 77 chr17 4034276 4034530 -81403950 + L2 LINE L2 2994 3307 -6 381 257 62 9 chr17 4034617 4034730 -81403750 + MIR SINE MIR 30 148 -60 505 272 26 101 chr17 4034732 4034923 -81403557 + MIR SINE MIR 2 169 -93 2067 127 3 0 chr17 4034923 4035222 -81403258 + AluSx SINE Alu 1 300 -12 505 272 26 101 chr17 4035222 4035298 -81403182 + MIR SINE MIR 169 249 -13 440 258 8 32 chr17 4035980 4036104 -81402376 + MIR3 SINE MIR 7 127 -81 559 243 111 17 chr17 4036203 4036384 -81402096 + MIR SINE MIR 46 243 -19 354 265 39 10 chr17 4036409 4036511 -81401969 + L3 LINE CR1 1399 1503 -74 191 111 44 0 chr17 4036692 4036737 -81401743 - L2 LINE L2 -212 3060 3014 2293 109 0 0 chr17 4036841 4037153 -81401327 + AluSq SINE Alu 1 312 -1 181 352 48 8 chr17 4037174 4037299 -81401181 - L2 LINE L2 -481 2833 2704 1205 273 77 37 chr17 4038024 4038544 -81399936 + L1ME2 LINE L1 5247 5802 -362 2239 100 0 0 chr17 4038544 4038843 -81399637 - AluSq SINE Alu -14 299 1 1205 273 77 37 chr17 4038843 4038940 -81399540 + L1ME2 LINE L1 5802 5894 -270 1991 102 3 56 chr17 4038975 4039298 -81399182 - AluSq SINE Alu -7 306 1 1551 179 3 14 chr17 4039307 4039450 -81399030 - AluJo SINE Alu -25 287 144 2278 99 0 0 chr17 4039450 4039754 -81398726 - AluSg1 SINE Alu -5 304 1 1551 179 3 14 chr17 4039754 4039900 -81398580 - AluJo SINE Alu -168 144 1 1859 112 63 0 chr17 4039929 4040214 -81398266 + AluSg SINE Alu 1 303 -7 520 189 24 0 chr17 4042610 4042737 -81395743 + (TCCA)n Simple_repeat Simple_repeat 3 132 0 258 250 21 31 chr17 4047198 4047294 -81391186 + CT-rich Low_complexity Low_complexity 5 99 0 203 152 87 0 chr17 4048277 4048323 -81390157 + MIR SINE MIR 68 117 -91 1712 136 19 30 chr17 4049289 4049326 -81389154 + LTR47A LTR ERVL 13 49 -403 2050 99 3 65 chr17 4049326 4049648 -81388832 - AluSx SINE Alu -10 302 1 1712 136 19 30 chr17 4049648 4050005 -81388475 + LTR47A LTR ERVL 49 452 0 2118 120 0 13 chr17 4050026 4050342 -81388138 - AluSx SINE Alu 0 312 1 1745 221 85 38 chr17 4050351 4050961 -81387519 - L1M4 LINE L1 -892 5254 4616 1931 148 3 0 chr17 4050990 4051288 -81387192 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr17 4051321 4051350 -81387130 + (TA)n Simple_repeat Simple_repeat 2 30 0 2334 79 0 7 chr17 4051350 4051653 -81386827 - AluSc SINE Alu -8 301 1 705 215 77 127 chr17 4051653 4052058 -81386422 + MLT1G3 LTR MaLR 106 595 0 2056 108 0 26 chr17 4052135 4052440 -81386040 + AluSx SINE Alu 1 297 -15 1828 80 0 4 chr17 4052572 4052811 -81385669 + AluY SINE Alu 1 238 -73 234 0 0 0 chr17 4052814 4052840 -81385640 + (A)n Simple_repeat Simple_repeat 1 26 0 322 73 18 18 chr17 4053561 4053616 -81384864 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 111 10 3 chr17 4053966 4054264 -81384216 + AluSx SINE Alu 1 300 -12 2412 81 0 0 chr17 4054650 4054957 -81383523 - AluSx SINE Alu -5 307 1 945 304 84 35 chr17 4054957 4055471 -81383009 - L1MC4a LINE L1 -977 6831 6293 2182 99 0 3 chr17 4055473 4055767 -81382713 + AluSx SINE Alu 1 293 -19 790 270 43 13 chr17 4055770 4056003 -81382477 - L1MC4a LINE L1 -2001 5807 5568 568 212 150 16 chr17 4056006 4056199 -81382281 - L1MC4a LINE L1 -2258 5550 5332 2230 97 0 22 chr17 4056202 4056522 -81381958 - AluSp SINE Alu 0 313 1 204 125 0 0 chr17 4056544 4056576 -81381904 + (TG)n Simple_repeat Simple_repeat 2 33 0 1894 120 11 4 chr17 4056576 4056852 -81381628 - AluSx SINE Alu -34 278 1 1879 160 3 13 chr17 4056883 4057190 -81381290 + AluJb SINE Alu 1 304 -8 452 313 28 17 chr17 4057208 4057387 -81381093 + L2 LINE L2 2550 2730 -584 741 193 7 0 chr17 4057456 4057596 -81380884 - LTR64 LTR ERVK -415 143 3 214 254 73 0 chr17 4057702 4057757 -81380723 + L2 LINE L2 3148 3206 -66 2361 58 3 26 chr17 4057778 4058089 -81380391 - AluY SINE Alu -7 304 1 2072 106 3 7 chr17 4059985 4060288 -81378192 + AluSq SINE Alu 1 302 -11 24 32 0 0 chr17 4060312 4060343 -81378137 + AT_rich Low_complexity Low_complexity 1 31 0 2175 106 0 7 chr17 4060348 4060649 -81377831 - AluSq SINE Alu -14 299 1 1154 150 19 33 chr17 4060653 4060816 -81377664 - AluJo SINE Alu -18 294 130 233 0 62 0 chr17 4060816 4060848 -81377632 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2024 71 18 18 chr17 4060848 4061130 -81377350 - AluY SINE Alu -29 282 1 1154 150 19 33 chr17 4061130 4061178 -81377302 - AluJo SINE Alu -180 132 85 637 170 30 0 chr17 4061247 4061347 -81377133 - U6 snRNA snRNA -4 103 1 2026 125 0 0 chr17 4061453 4061750 -81376730 + AluSx SINE Alu 1 297 -15 2176 101 7 3 chr17 4061785 4062093 -81376387 + AluSg SINE Alu 1 309 -1 397 181 21 0 chr17 4062093 4062187 -81376293 + GA-rich Low_complexity Low_complexity 1 96 0 870 71 11 50 chr17 4062189 4062371 -81376109 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 505 285 85 41 chr17 4062381 4062676 -81375804 - HAL1 LINE L1 -84 2423 2116 897 300 98 23 chr17 4062727 4063218 -81375262 + MLT1G LTR MaLR 10 555 0 1666 236 83 48 chr17 4063219 4063762 -81374718 + L2 LINE L2 2381 2942 -372 2356 266 123 36 chr17 4063770 4064990 -81373490 - HAL1 LINE L1 -439 2068 743 1759 141 19 44 chr17 4065006 4065410 -81373070 - AluSp SINE Alu 0 396 1 240 261 11 45 chr17 4065426 4065514 -81372966 - HAL1 LINE L1 -1783 724 640 357 338 109 42 chr17 4065542 4065945 -81372535 - HAL1 LINE L1 -2076 431 2 379 296 23 38 chr17 4066089 4066221 -81372259 + MIR SINE MIR 133 262 0 181 263 0 0 chr17 4066608 4066646 -81371834 + MIR SINE MIR 42 79 -129 526 240 113 70 chr17 4066653 4066882 -81371598 + MIR SINE MIR 20 258 -4 2115 84 0 7 chr17 4067237 4067550 -81370930 - AluSq SINE Alu 0 313 3 2338 93 0 0 chr17 4067682 4067984 -81370496 - AluSx SINE Alu -10 302 1 1220 242 31 92 chr17 4068386 4068960 -81369520 + MER34 LTR ERV1 1 539 -3 2134 91 14 0 chr17 4070396 4070683 -81367797 - AluSp SINE Alu -22 291 1 1874 103 46 4 chr17 4070903 4071184 -81367296 + AluSq SINE Alu 1 293 -20 2382 89 0 6 chr17 4071337 4071650 -81366830 + AluSx SINE Alu 1 311 -1 29 0 0 0 chr17 4072026 4072055 -81366425 + AT_rich Low_complexity Low_complexity 1 29 0 2260 90 0 3 chr17 4072055 4072354 -81366126 + AluSq SINE Alu 1 298 -15 1252 151 5 23 chr17 4072524 4072742 -81365738 + AluJb SINE Alu 85 298 -14 231 188 0 0 chr17 4072855 4072903 -81365577 + GA-rich Low_complexity Low_complexity 4 51 0 614 237 132 26 chr17 4073961 4074151 -81364329 - MER63A DNA MER1_type 0 210 1 3652 128 11 5 chr17 4075139 4075692 -81362788 + L1PA15 LINE L1 5606 6161 -4 1079 145 0 31 chr17 4075790 4075983 -81362497 - AluSg/x SINE Alu -5 305 119 473 209 18 67 chr17 4076002 4076192 -81362288 - MER106B DNA MER1_type -5 1054 856 2008 84 4 0 chr17 4076192 4076453 -81362027 + AluSq SINE Alu 1 262 -51 225 0 0 0 chr17 4076455 4076480 -81362000 + (TAA)n Simple_repeat Simple_repeat 2 26 0 473 209 18 67 chr17 4076480 4076548 -81361932 - MER106B DNA MER1_type -204 855 1 2045 117 10 10 chr17 4076644 4076942 -81361538 + AluSx SINE Alu 1 298 -14 214 346 55 16 chr17 4078434 4078561 -81359919 + L2 LINE L2 3180 3311 -2 1633 139 17 50 chr17 4078904 4079206 -81359274 - AluJb SINE Alu -20 292 1 460 263 2 14 chr17 4079234 4079371 -81359109 - MIR SINE MIR -62 146 16 203 354 0 0 chr17 4082307 4082389 -81356091 + G-rich Low_complexity Low_complexity 6 87 0 264 139 0 0 chr17 4082809 4082852 -81355628 - MIR SINE MIR -9 253 211 195 220 0 0 chr17 4083548 4083598 -81354882 + (CACG)n Simple_repeat Simple_repeat 2 51 0 187 268 71 71 chr17 4083742 4083854 -81354626 + L2 LINE L2 2722 2833 -481 2115 97 3 32 chr17 4084177 4084487 -81353993 - AluSg SINE Alu -9 301 1 245 333 37 37 chr17 4084560 4084695 -81353785 + L2 LINE L2 3129 3263 -9 2203 119 0 0 chr17 4084886 4085198 -81353282 - AluSx SINE Alu 0 312 1 1192 274 111 22 chr17 4085356 4085884 -81352596 - L1MC4a LINE L1 -588 5563 5396 2245 102 0 3 chr17 4085884 4086189 -81352291 - AluSq SINE Alu -9 304 1 1192 274 111 22 chr17 4086189 4086209 -81352271 - L1MC4a LINE L1 -755 5396 5379 532 221 40 137 chr17 4086405 4086531 -81351949 + MLT1F-int LTR MaLR 1078 1215 -156 2147 113 10 0 chr17 4086531 4086832 -81351648 + AluSq SINE Alu 3 306 -7 532 221 40 137 chr17 4086832 4087026 -81351454 + MLT1F-int LTR MaLR 1215 1367 -4 1457 211 36 75 chr17 4087032 4087472 -81351008 + MLT1F LTR MaLR 2 424 -118 1092 191 11 0 chr17 4087505 4087694 -81350786 - AluJb SINE Alu -8 304 114 2084 112 0 19 chr17 4087822 4088156 -81350324 - AluSx SINE Alu 0 312 3 1638 171 27 13 chr17 4088682 4088806 -81349674 + AluJo SINE Alu 3 124 -188 2232 107 0 3 chr17 4088806 4089114 -81349366 + AluSx SINE Alu 1 307 -5 1638 171 27 13 chr17 4089114 4089287 -81349193 + AluJo SINE Alu 124 304 -8 2178 88 14 10 chr17 4089357 4089654 -81348826 + AluSx SINE Alu 1 298 -14 1035 174 19 31 chr17 4090217 4090507 -81347973 - MER89 LTR ERV1 -170 389 1 707 201 41 106 chr17 4090507 4090800 -81347680 - L1ME LINE L1 -628 5538 5265 757 83 0 0 chr17 4090949 4091045 -81347435 + AluSc SINE Alu 201 296 -13 23 0 0 0 chr17 4091967 4091990 -81346490 + AT_rich Low_complexity Low_complexity 1 23 0 205 276 0 26 chr17 4092836 4092912 -81345568 + (TG)n Simple_repeat Simple_repeat 1 74 0 230 274 0 0 chr17 4097703 4097765 -81340715 + C-rich Low_complexity Low_complexity 6 67 0 2095 92 0 27 chr17 4098758 4099050 -81339430 - AluSg SINE Alu -26 284 1 1974 133 10 0 chr17 4099538 4099832 -81338648 - AluSg SINE Alu -13 297 1 271 317 125 0 chr17 4100285 4100405 -81338075 + MIR SINE MIR 95 229 -33 200 184 0 0 chr17 4101420 4101458 -81337022 + (GGCTG)n Simple_repeat Simple_repeat 4 41 0 2061 104 9 35 chr17 4102120 4102438 -81336042 + AluSq SINE Alu 1 310 -3 241 242 13 41 chr17 4103319 4103431 -81335049 + MIR SINE MIR 10 114 -94 * 311 349 61 28 chr17 4103414 4103626 -81334854 - MIR SINE MIR -3 259 41 744 156 0 0 chr17 4103653 4103762 -81334718 - FRAM SINE Alu -58 118 10 2310 92 0 0 chr17 4104052 4104347 -81334133 + AluSq SINE Alu 1 295 -18 2018 109 46 0 chr17 4105463 4105747 -81332733 - AluSx SINE Alu -15 297 1 198 208 21 21 chr17 4105818 4105866 -81332614 - MIR SINE MIR -186 76 29 1192 234 72 16 chr17 4106049 4106356 -81332124 + MER33 DNA MER1_type 1 324 0 320 311 116 66 chr17 4108318 4108620 -81329860 - L2 LINE L2 0 3313 2997 558 300 191 10 chr17 4108745 4109132 -81329348 - L2 LINE L2 -537 2777 2321 2282 89 0 7 chr17 4109937 4110241 -81328239 - AluSq SINE Alu -11 302 1 1688 186 0 0 chr17 4110242 4110551 -81327929 - AluJo SINE Alu 0 312 2 992 248 66 106 chr17 4113780 4114155 -81324325 + L1ME3A LINE L1 5690 6042 -128 2210 103 6 10 chr17 4114155 4114467 -81324013 - AluSq SINE Alu -2 311 1 992 248 66 106 chr17 4114467 4114592 -81323888 + L1ME3A LINE L1 6042 6170 0 359 299 86 0 chr17 4114719 4114836 -81323644 - MER5A DNA MER1_type -4 185 59 612 323 50 0 chr17 4115577 4115797 -81322683 + MIR SINE MIR 26 256 -6 213 39 0 0 chr17 4115869 4115895 -81322585 + (CA)n Simple_repeat Simple_repeat 1 26 0 215 227 0 0 chr17 4115917 4115961 -81322519 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 634 241 59 18 chr17 4115962 4116132 -81322348 + MER5B DNA MER1_type 2 178 0 202 254 8 164 chr17 4116145 4116267 -81322213 + MER5B DNA MER1_type 17 119 -59 2225 104 0 3 chr17 4116274 4116572 -81321908 - AluSq SINE Alu -16 297 1 372 253 0 0 chr17 4116896 4116979 -81321501 - ERVL LTR ERVL -3757 2007 1925 824 77 0 0 chr17 4116988 4117092 -81321388 - AluSg/x SINE Alu -10 302 199 548 293 95 31 chr17 4117129 4117264 -81321216 + HERVL LTR ERVL 2333 2458 -3196 2091 94 18 0 chr17 4117264 4117623 -81320857 - AluSx SINE Alu 0 364 1 548 293 95 31 chr17 4117623 4117671 -81320809 + HERVL LTR ERVL 2458 2501 -3153 2217 121 0 0 chr17 4117671 4117976 -81320504 - AluSx SINE Alu -7 305 1 548 293 95 31 chr17 4117976 4118084 -81320396 + HERVL LTR ERVL 2501 2645 -3009 572 259 30 55 chr17 4118109 4118345 -81320135 + LTR67 LTR ERVL 328 557 0 2171 93 43 10 chr17 4118858 4119160 -81319320 - AluSx SINE Alu 0 312 1 207 0 0 0 chr17 4119170 4119193 -81319287 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1367 94 0 6 chr17 4119215 4119396 -81319084 - AluSp SINE Alu -133 180 1 1504 213 94 43 chr17 4119470 4119982 -81318498 - LTR55 LTR ERV -10 538 1 1622 175 11 0 chr17 4120132 4120401 -81318079 - AluJo SINE Alu -4 308 37 2062 140 3 13 chr17 4120438 4120753 -81317727 - AluSx SINE Alu 0 312 1 2221 108 0 3 chr17 4120920 4121225 -81317255 - AluSx SINE Alu -5 307 4 265 143 200 0 chr17 4121252 4121322 -81317158 - MER105 DNA DNA 0 204 121 2108 107 3 10 chr17 4121718 4122017 -81316463 + AluSx SINE Alu 3 299 -13 649 268 49 0 chr17 4122048 4122272 -81316208 + L1MB2 LINE L1 5936 6170 -1 282 56 0 0 chr17 4122414 4122450 -81316030 + (TG)n Simple_repeat Simple_repeat 1 36 0 775 172 8 0 chr17 4123100 4123222 -81315258 - FLAM_C SINE Alu -18 125 3 210 37 0 0 chr17 4123253 4123280 -81315200 + (TA)n Simple_repeat Simple_repeat 2 28 0 2327 82 0 0 chr17 4123280 4123574 -81314906 - AluSg SINE Alu -16 294 1 23 33 0 0 chr17 4125195 4125225 -81313255 + AT_rich Low_complexity Low_complexity 1 30 0 2420 222 65 29 chr17 4125292 4125881 -81312599 - L1ME1 LINE L1 -108 6058 5435 795 88 0 0 chr17 4125881 4125994 -81312486 + (TG)n Simple_repeat Simple_repeat 2 114 0 2420 222 65 29 chr17 4125994 4126152 -81312328 - L1ME1 LINE L1 -731 5435 5284 819 149 0 0 chr17 4126152 4126286 -81312194 - AluSp/q SINE Alu -5 308 175 270 0 0 0 chr17 4127104 4127134 -81311346 + (TG)n Simple_repeat Simple_repeat 1 30 0 526 190 0 74 chr17 4127135 4127306 -81311174 - MIR SINE MIR -26 236 82 1585 115 27 103 chr17 4127821 4128152 -81310328 + AluYb8 SINE Alu 4 309 -9 206 264 217 39 chr17 4129049 4129178 -81309302 - L2 LINE L2 -219 3053 2902 1252 171 20 33 chr17 4329232 4329477 -81109003 - AluJo SINE Alu -70 242 1 798 328 85 32 chr17 4329499 4329996 -81108484 - L2 LINE L2 -1081 2233 1689 2185 108 0 20 chr17 4329996 4330301 -81108179 + AluSg SINE Alu 11 309 -1 798 328 85 32 chr17 4330301 4330483 -81107997 - L2 LINE L2 -1625 1689 1518 241 130 0 0 chr17 4330547 4330593 -81107887 + MADE1 DNA Mariner 1 46 -34 197 291 182 7 chr17 4330602 4330750 -81107730 - L2 LINE L2 -1897 1417 1244 330 146 0 0 chr17 4331063 4331111 -81107369 + AluSg/x SINE Alu 218 265 -37 21 0 0 0 chr17 4331214 4331235 -81107245 + AT_rich Low_complexity Low_complexity 1 21 0 304 333 103 10 chr17 4331509 4331713 -81106767 + L2 LINE L2 2847 3069 -244 2392 90 0 0 chr17 4331788 4332089 -81106391 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 4332104 4332131 -81106349 + (TTG)n Simple_repeat Simple_repeat 3 29 0 180 195 73 0 chr17 4332759 4332800 -81105680 - L2 LINE L2 -3 3269 3226 548 212 78 60 chr17 4333417 4333634 -81104846 + L1MC4 LINE L1 5639 5859 -1949 979 248 125 21 chr17 4333634 4334135 -81104345 + L2 LINE L2 2509 3072 -241 288 0 0 0 chr17 4334135 4334167 -81104313 + (CA)n Simple_repeat Simple_repeat 1 32 0 1984 112 36 7 chr17 4334258 4334535 -81103945 + AluSg SINE Alu 1 285 -25 379 260 77 65 chr17 4334598 4334767 -81103713 + L2 LINE L2 3103 3273 -40 273 267 61 53 chr17 4334772 4334903 -81103577 + L1MD2 LINE L1 6198 6329 -30 366 333 0 0 chr17 4334911 4335001 -81103479 + L1MC4 LINE L1 6614 6703 -1339 339 298 48 0 chr17 4334959 4335043 -81103437 - L1MC4 LINE L1 -1339 6703 6616 * 1117 215 5 10 chr17 4335146 4335351 -81103129 - AluJo SINE Alu -108 204 1 1360 263 198 35 chr17 4335378 4335720 -81102760 + HAL1 LINE L1 126 411 -2096 1959 71 108 8 chr17 4335720 4335988 -81102492 + AluSx SINE Alu 1 295 -17 1360 263 198 35 chr17 4335988 4336010 -81102470 + HAL1 LINE L1 411 428 -2079 1554 170 99 7 chr17 4336010 4336293 -81102187 + AluJb SINE Alu 1 309 -3 1360 263 198 35 chr17 4336293 4336527 -81101953 + HAL1 LINE L1 428 823 -1684 1138 168 0 0 chr17 4336527 4336700 -81101780 - FRAM SINE Alu -6 170 1 287 247 35 0 chr17 4336703 4336788 -81101692 + HAL1 LINE L1 817 904 -1603 572 138 0 0 chr17 4336866 4336953 -81101527 + AluS SINE Alu 2 88 -224 2355 116 0 0 chr17 4337268 4337579 -81100901 + AluSx SINE Alu 1 311 -1 308 192 39 0 chr17 4337579 4337657 -81100823 + HAL1 LINE L1 2304 2384 -123 1035 150 63 77 chr17 4337666 4337715 -81100765 + AluJb SINE Alu 87 135 -177 2335 109 0 6 chr17 4337715 4338028 -81100452 + AluSx SINE Alu 1 311 -1 1035 150 63 77 chr17 4338028 4338185 -81100295 + AluJb SINE Alu 135 290 -22 396 203 144 25 chr17 4338190 4338308 -81100172 + HAL1 LINE L1 2376 2507 0 2240 119 7 0 chr17 4338336 4338662 -81099818 + AluSq SINE Alu 1 313 0 2429 99 0 0 chr17 4339056 4339358 -81099122 + AluSq SINE Alu 1 302 -11 2194 102 0 7 chr17 4339525 4339819 -81098661 + AluSx SINE Alu 1 292 -20 1597 194 113 100 chr17 4339973 4340095 -81098385 - L1MC4 LINE L1 -230 7812 7693 198 0 0 0 chr17 4340095 4340117 -81098363 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1597 194 113 100 chr17 4340117 4340175 -81098305 - L1MC4 LINE L1 -349 7693 7637 1908 126 35 29 chr17 4340175 4340485 -81097995 - AluSx SINE Alu 0 312 1 1597 194 113 100 chr17 4340485 4340687 -81097793 - L1MC4 LINE L1 -405 7637 7439 713 124 7 103 chr17 4340687 4340832 -81097648 + FLAM_C SINE Alu 3 133 0 1597 194 113 100 chr17 4340832 4341075 -81097405 - L1MC4 LINE L1 -603 7439 7177 2485 288 64 47 chr17 4341150 4341304 -81097176 + L2 LINE L2 1882 2032 -1282 1767 175 10 10 chr17 4341304 4341613 -81096867 - AluJo SINE Alu -3 309 1 2485 288 64 47 chr17 4341613 4342494 -81095986 + L2 LINE L2 2032 2939 -375 1609 179 10 17 chr17 4342494 4342796 -81095684 - AluJo SINE Alu -12 300 1 2485 288 64 47 chr17 4342796 4342831 -81095649 + L2 LINE L2 2939 2972 -342 390 125 0 0 chr17 4342885 4342941 -81095539 + AluS SINE Alu 8 63 -237 185 261 134 0 chr17 4344045 4344164 -81094316 + L2 LINE L2 2723 2857 -457 232 283 248 25 chr17 4344308 4344626 -81093854 + L2 LINE L2 2879 3267 -46 2112 113 28 3 chr17 4345030 4345321 -81093159 + AluSq SINE Alu 1 298 -15 2240 119 3 0 chr17 4346971 4347266 -81091214 + AluSx SINE Alu 2 297 -15 208 150 25 0 chr17 4347425 4347465 -81091015 + (CCCCAG)n Simple_repeat Simple_repeat 6 46 0 363 23 0 0 chr17 4348365 4348409 -81090071 + (TG)n Simple_repeat Simple_repeat 2 45 0 186 191 0 0 chr17 4348427 4348469 -81090011 + (TG)n Simple_repeat Simple_repeat 2 43 0 309 100 0 0 chr17 4348499 4348549 -81089931 + (TG)n Simple_repeat Simple_repeat 2 51 0 357 62 0 0 chr17 4348585 4348633 -81089847 + (TG)n Simple_repeat Simple_repeat 2 49 0 251 293 13 0 chr17 4350057 4350132 -81088348 - MIR SINE MIR -8 254 179 2087 85 0 24 chr17 4350134 4350290 -81088190 - AluSx SINE Alu -14 288 141 2067 141 0 19 chr17 4350290 4350463 -81088017 - AluSx SINE Alu -6 306 140 2440 69 3 0 chr17 4350463 4350753 -81087727 - AluY SINE Alu -20 291 1 2067 141 0 19 chr17 4350753 4350891 -81087589 - AluSx SINE Alu -172 140 1 2087 85 0 24 chr17 4350891 4351029 -81087451 - AluSx SINE Alu -161 141 1 517 101 0 0 chr17 4351031 4351137 -81087343 + AluSg/x SINE Alu 214 319 0 575 232 73 6 chr17 4351137 4351301 -81087179 - MIR SINE MIR -87 175 1 241 247 34 22 chr17 4354099 4354188 -81084292 + (TCCA)n Simple_repeat Simple_repeat 2 91 0 196 296 163 10 chr17 4354188 4354286 -81084194 - L2 LINE L2 -28 3285 3173 485 104 0 0 chr17 4354436 4354513 -81083967 - Alu SINE Alu 0 311 235 6364 135 240 19 chr17 4354513 4355881 -81082599 + pTR5 LTR ERV1 748 2417 -21 346 190 76 0 chr17 4355892 4355971 -81082509 - AluSg/x SINE Alu -48 254 170 1358 129 177 12 chr17 4356249 4356497 -81081983 + AluSg SINE Alu 1 289 -11 2381 86 3 3 chr17 4356499 4356802 -81081678 + AluY SINE Alu 1 303 -8 739 196 14 0 chr17 4356803 4356946 -81081534 + AluJb SINE Alu 116 260 -52 808 364 62 44 chr17 4356947 4357759 -81080721 - L2 LINE L2 -15 3298 2474 2274 93 17 0 chr17 4357762 4358052 -81080428 + AluSx SINE Alu 1 295 -17 2419 61 3 10 chr17 4359045 4359341 -81079139 + AluSx SINE Alu 1 294 -18 302 221 13 39 chr17 4360296 4360373 -81078107 - L2 LINE L2 -3 3269 3195 298 310 87 45 chr17 4360418 4360742 -81077738 - L2 LINE L2 -195 3077 2746 280 329 65 29 chr17 4360737 4360907 -81077573 + L2 LINE L2 2426 2601 -713 * 1953 169 0 0 chr17 4361377 4361673 -81076807 - AluJb SINE Alu -16 296 1 333 278 87 24 chr17 4361995 4362121 -81076359 - L2 LINE L2 -5 3308 3175 464 299 13 32 chr17 4362251 4362405 -81076075 + L2 LINE L2 2597 2747 -567 207 0 0 0 chr17 4362794 4362817 -81075663 + (T)n Simple_repeat Simple_repeat 1 23 0 1782 149 25 38 chr17 4362852 4363167 -81075313 - AluJb SINE Alu -1 311 1 659 81 11 0 chr17 4363260 4363347 -81075133 - AluSq SINE Alu -125 188 101 2306 96 0 3 chr17 4363453 4363754 -81074726 - AluSg SINE Alu -10 300 1 1912 86 0 163 chr17 4363754 4364104 -81074376 - AluSg SINE Alu -17 293 1 188 33 0 33 chr17 4364105 4364135 -81074345 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 2028 117 0 28 chr17 4364135 4364425 -81074055 - AluSx SINE Alu -30 282 1 1234 187 49 49 chr17 4364427 4364753 -81073727 - L1MB7 LINE L1 -45 6139 5814 542 182 27 36 chr17 4364769 4364879 -81073601 - FLAM_A SINE Alu -33 109 1 1307 170 87 7 chr17 4364883 4364911 -81073569 - L1MB7 LINE L1 -356 5828 5804 2778 163 20 38 chr17 4364911 4365471 -81073009 + MER44D DNA MER2_type 1 605 0 1307 170 87 7 chr17 4365471 4365730 -81072750 - L1MB7 LINE L1 -380 5804 5518 395 247 17 98 chr17 4365734 4365771 -81072709 + L2 LINE L2 2991 3029 -284 2424 88 0 0 chr17 4365771 4366067 -81072413 - AluSq SINE Alu -17 296 1 395 247 17 98 chr17 4366067 4366264 -81072216 + L2 LINE L2 3029 3206 -107 2668 50 0 0 chr17 4366310 4366609 -81071871 - AluY SINE Alu -12 299 1 2191 127 0 0 chr17 4368064 4368355 -81070125 - AluSx SINE Alu -21 291 1 2717 145 12 79 chr17 4368365 4368771 -81069709 - L1PB3 LINE L1 -2 6152 5795 2179 97 4 4 chr17 4368771 4369049 -81069431 - AluSg SINE Alu -32 278 1 2717 145 12 79 chr17 4369049 4369223 -81069257 - L1PB3 LINE L1 -359 5795 5611 5959 194 22 13 chr17 4369228 4370428 -81068052 - L1MB7 LINE L1 -758 5388 4173 2125 143 0 3 chr17 4370428 4370742 -81067738 - AluSq SINE Alu 0 313 1 5959 194 22 13 chr17 4370742 4370909 -81067571 - L1MB7 LINE L1 -1973 4173 4009 382 292 106 0 chr17 4370973 4371086 -81067394 - L2 LINE L2 0 3272 3148 369 181 64 0 chr17 4371164 4371257 -81067223 - MER58 DNA MER1_type -232 109 1 422 86 0 0 chr17 4371273 4371343 -81067137 - AluY SINE Alu -7 302 233 1496 106 0 0 chr17 4371343 4371531 -81066949 - AluY SINE Alu -122 189 2 2079 153 3 0 chr17 4371726 4372034 -81066446 + AluSx SINE Alu 1 309 -3 2664 50 3 0 chr17 4372037 4372339 -81066141 + AluY SINE Alu 1 303 -8 1979 151 14 0 chr17 4373383 4373674 -81064806 - AluJb SINE Alu -17 295 1 21 0 0 0 chr17 4373692 4373713 -81064767 + AT_rich Low_complexity Low_complexity 1 21 0 2344 107 0 0 chr17 4373737 4374036 -81064444 - AluSc SINE Alu -10 299 1 1849 107 19 91 chr17 4374037 4374356 -81064124 - AluSx SINE Alu -16 296 1 2166 127 3 3 chr17 4374978 4375277 -81063203 + AluSx SINE Alu 1 299 -13 353 333 67 17 chr17 4375342 4375522 -81062958 - MIR SINE MIR -14 248 60 257 324 54 0 chr17 4375523 4375634 -81062846 + MER117 DNA MER1_type 26 142 -55 1478 156 5 9 chr17 4376299 4376523 -81061957 + AluSg/x SINE Alu 72 294 -18 897 171 29 0 chr17 4377079 4377219 -81061261 - FRAM SINE Alu -24 152 9 2390 95 0 3 chr17 4377463 4377759 -81060721 - AluSg SINE Alu -15 295 1 1780 139 63 21 chr17 4377759 4378046 -81060434 - AluJb SINE Alu -13 299 1 1154 209 60 38 chr17 4378046 4378362 -81060118 - Charlie4a DNA MER1_type -185 323 1 22 0 0 0 chr17 4381788 4381810 -81056670 + AT_rich Low_complexity Low_complexity 1 22 0 278 254 213 25 chr17 4381810 4381932 -81056548 - MIR SINE MIR -56 206 62 593 154 0 77 chr17 4383375 4383570 -81054910 + GA-rich Low_complexity Low_complexity 1 180 0 2067 120 10 0 chr17 4384950 4385250 -81053230 - AluSg SINE Alu -7 303 1 188 206 0 0 chr17 4385469 4385503 -81052977 - L2 LINE L2 -264 3049 3016 283 316 62 37 chr17 4385688 4385932 -81052548 - L1MC4 LINE L1 -104 7938 7689 267 295 67 9 chr17 4386029 4386134 -81052346 + L3 LINE CR1 157 267 -1310 22 0 0 0 chr17 4386305 4386327 -81052153 + AT_rich Low_complexity Low_complexity 1 22 0 286 319 121 28 chr17 4386512 4386760 -81051720 + L2 LINE L2 2690 2960 -354 1898 101 18 0 chr17 4386813 4387089 -81051391 + AluSx SINE Alu 15 295 -17 1503 120 4 21 chr17 4387982 4388044 -81050436 + AluSq SINE Alu 75 137 -176 2239 79 10 0 chr17 4388044 4388336 -81050144 + AluSx SINE Alu 1 295 -17 1503 120 4 21 chr17 4388336 4388515 -81049965 + AluSq SINE Alu 137 312 -1 338 273 167 0 chr17 4388741 4388873 -81049607 - MIR SINE MIR -62 200 47 186 191 0 0 chr17 4389465 4389507 -81048973 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2051 90 11 4 chr17 4389830 4390137 -81048343 + AluSg SINE Alu 1 309 0 690 188 39 0 chr17 4390272 4390400 -81048080 + FLAM_C SINE Alu 1 133 0 238 200 0 0 chr17 4390659 4390704 -81047776 + L2 LINE L2 3267 3311 -2 1709 157 131 52 chr17 4391474 4391694 -81046786 - MER39 LTR ERV1 0 707 506 2201 88 14 0 chr17 4391694 4391988 -81046492 + AluSp SINE Alu 1 298 -15 1709 157 131 52 chr17 4391988 4392250 -81046230 - MER39 LTR ERV1 -201 506 5 371 281 10 97 chr17 4392368 4392564 -81045916 + MIR SINE MIR 25 203 -59 1904 102 11 0 chr17 4392753 4393018 -81045462 - AluSq SINE Alu -45 268 1 678 269 46 102 chr17 4393179 4393589 -81044891 - MLT1K LTR MaLR -26 562 176 1314 48 6 0 chr17 4393589 4393755 -81044725 - THE1C LTR MaLR 0 375 209 1113 67 0 0 chr17 4394055 4394190 -81044290 + AluSq/x SINE Alu 1 135 -177 2090 107 7 13 chr17 4394190 4394498 -81043982 + AluSx SINE Alu 1 306 -6 2168 129 8 38 chr17 4394707 4394843 -81043637 - L1PA16 LINE L1 0 6166 6028 2330 95 0 0 chr17 4394843 4395148 -81043332 - AluSx SINE Alu -7 305 1 2168 129 8 38 chr17 4395148 4395383 -81043097 - L1PA16 LINE L1 -138 6028 5806 445 286 70 66 chr17 4395420 4395586 -81042894 + MLT1J LTR MaLR 234 398 -113 189 0 0 0 chr17 4395586 4395607 -81042873 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2101 92 0 7 chr17 4395609 4395893 -81042587 - AluSx SINE Alu -29 283 2 445 286 70 66 chr17 4395893 4395964 -81042516 + MLT1J LTR MaLR 398 475 -36 2148 105 23 3 chr17 4396137 4396443 -81042037 - AluSx SINE Alu 0 312 1 729 237 121 22 chr17 4396461 4396472 -81042008 + HsTC2 DNA Tc2 2 11 -1887 1554 117 121 23 chr17 4396472 4396736 -81041744 - AluSg SINE Alu -20 290 1 729 237 121 22 chr17 4396736 4396948 -81041532 + HsTC2 DNA Tc2 11 247 -1651 1502 214 21 8 chr17 4396954 4397333 -81041147 + L1M4 LINE L1 4375 4758 -1388 1068 165 114 111 chr17 4397334 4397653 -81040827 + AluJo SINE Alu 1 320 0 2143 97 13 13 chr17 4397662 4397971 -81040509 + AluSp SINE Alu 2 310 -3 1945 138 22 28 chr17 4397976 4398338 -81040142 + L1MC1 LINE L1 5918 6277 -56 969 113 0 0 chr17 4398338 4398471 -81040009 + AluSq/x SINE Alu 1 133 -179 222 118 0 0 chr17 4398471 4398505 -81039975 + (A)n Simple_repeat Simple_repeat 1 34 0 485 73 0 15 chr17 4398505 4398573 -81039907 + L1MC1 LINE L1 6261 6327 -6 1972 118 0 10 chr17 4398574 4398902 -81039578 + AluSx SINE Alu 1 312 0 574 209 201 14 chr17 4399031 4399316 -81039164 + HsTC2 DNA Tc2 1296 1811 -87 1987 131 0 0 chr17 4399316 4399626 -81038854 + AluSx SINE Alu 1 310 0 243 310 113 48 chr17 4399673 4399902 -81038578 - L2 LINE L2 -23 3290 3047 518 100 0 0 chr17 4400023 4400093 -81038387 + AluS SINE Alu 2 71 -241 273 57 0 0 chr17 4400587 4400622 -81037858 + (A)n Simple_repeat Simple_repeat 1 35 0 313 250 31 102 chr17 4400775 4400903 -81037577 - L2 LINE L2 -6 3307 3189 2345 68 0 3 chr17 4401080 4401374 -81037106 - AluSc SINE Alu -16 293 1 452 292 23 32 chr17 4401376 4401595 -81036885 - L1MC5 LINE L1 -429 7532 7316 280 325 155 48 chr17 4401598 4401717 -81036763 + L2 LINE L2 2809 2914 -358 2257 105 0 0 chr17 4401717 4402022 -81036458 - AluSq SINE Alu -8 305 1 280 325 155 48 chr17 4402022 4402314 -81036166 + L2 LINE L2 2914 3264 -8 279 330 80 18 chr17 4402633 4402745 -81035735 - L2 LINE L2 -4 3309 3191 854 241 108 56 chr17 4402747 4402857 -81035623 + MER58B DNA MER1_type 1 104 -2316 2261 58 0 21 chr17 4402857 4403148 -81035332 + AluY SINE Alu 17 301 -10 854 241 108 56 chr17 4403148 4403360 -81035120 + MER58B DNA MER1_type 104 340 -1 548 222 73 43 chr17 4403374 4403608 -81034872 - MER112 DNA MER1_type -12 248 8 726 139 47 47 chr17 4403608 4403737 -81034743 + FLAM_C SINE Alu 1 129 -4 356 259 9 19 chr17 4403851 4403959 -81034521 - L2 LINE L2 -196 3076 2970 2297 100 0 0 chr17 4403962 4404263 -81034217 + AluSg1 SINE Alu 2 302 -7 1324 102 5 0 chr17 4404564 4404751 -81033729 - AluSp SINE Alu -5 308 121 350 54 0 54 chr17 4404759 4404833 -81033647 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 1234 70 0 41 chr17 4404834 4405005 -81033475 - AluY SINE Alu -147 164 1 760 159 0 23 chr17 4405008 4405140 -81033340 - AluJo/FLAM SINE Alu -173 129 1 733 246 28 9 chr17 4405140 4405355 -81033125 - L1M4 LINE L1 -3371 2775 2557 711 259 118 4 chr17 4405503 4405731 -81032749 - MIR SINE MIR -3 259 6 2155 125 0 0 chr17 4405827 4406139 -81032341 - AluSx SINE Alu 0 312 1 1723 170 3 3 chr17 4406147 4406436 -81032044 - AluJb SINE Alu -23 289 1 2271 92 0 10 chr17 4406626 4406929 -81031551 + AluSx SINE Alu 2 301 -11 332 285 57 83 chr17 4406946 4407174 -81031306 + MIR SINE MIR 39 260 -2 1466 296 57 63 chr17 4407304 4407723 -81030757 + L2 LINE L2 107 527 -2787 2582 69 41 72 chr17 4407723 4408142 -81030338 - L1MA2 LINE L1 0 6304 5899 2055 117 3 13 chr17 4408142 4408451 -81030029 - AluSx SINE Alu -1 311 6 1466 296 57 63 chr17 4408451 4408951 -81029529 + L2 LINE L2 525 1021 -2293 1284 114 0 0 chr17 4408982 4409158 -81029322 - AluSx SINE Alu -136 176 1 201 363 22 22 chr17 4409172 4409263 -81029217 + L2 LINE L2 3222 3312 -1 1289 113 11 0 chr17 4409336 4409521 -81028959 + AluSp SINE Alu 1 187 -126 2165 101 13 7 chr17 4409785 4410092 -81028388 + AluSx SINE Alu 1 309 -3 233 213 85 11 chr17 4410229 4410323 -81028157 + L1MC5 LINE L1 7827 7927 -34 2361 77 0 0 chr17 4410339 4410636 -81027844 + AluSg SINE Alu 1 297 -13 310 229 9 48 chr17 4410643 4410748 -81027732 - MER113 DNA MER1_type? -417 104 4 240 226 0 0 chr17 4413365 4413427 -81025053 + GA-rich Low_complexity Low_complexity 2 63 0 718 255 128 30 chr17 4413712 4414010 -81024470 + MER102b DNA MER1_type 15 341 0 401 252 45 68 chr17 4415167 4415344 -81023136 + MIR3 SINE MIR 7 186 -75 1585 149 76 4 chr17 4415466 4415741 -81022739 + AluJb SINE Alu 1 295 -17 28 0 0 0 chr17 4418358 4418386 -81020094 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 4418453 4418474 -81020006 + GC_rich Low_complexity Low_complexity 1 21 0 1825 86 12 4 chr17 4418672 4418929 -81019551 - AluSq SINE Alu -8 305 47 848 49 0 0 chr17 4419369 4419471 -81019009 + AluS SINE Alu 1 102 -210 2242 92 3 0 chr17 4420042 4420347 -81018133 - AluY SINE Alu -5 306 1 29 0 0 0 chr17 4420417 4420446 -81018034 + AT_rich Low_complexity Low_complexity 1 29 0 578 157 10 0 chr17 4420528 4420630 -81017850 - AluJb SINE Alu 0 312 210 434 76 0 51 chr17 4420734 4420804 -81017676 + Alu SINE Alu 232 304 -7 2477 43 0 10 chr17 4420804 4421108 -81017372 + AluY SINE Alu 1 301 -10 607 148 157 0 chr17 4421110 4421225 -81017255 + FLAM_C SINE Alu 1 133 0 2046 108 10 3 chr17 4421230 4421526 -81016954 + AluSp SINE Alu 1 298 -15 2151 98 0 7 chr17 4421533 4421828 -81016652 + AluSq SINE Alu 1 293 -20 203 303 13 13 chr17 4421977 4422053 -81016427 + L2 LINE L2 3016 3091 -181 2244 66 0 10 chr17 4422241 4422555 -81015925 + AluSx SINE Alu 1 311 0 1665 135 13 50 chr17 4422695 4422998 -81015482 + AluJo SINE Alu 1 292 -20 316 325 33 26 chr17 4423069 4423220 -81015260 + L2 LINE L2 3150 3301 -12 2274 86 0 3 chr17 4423279 4423580 -81014900 + AluSc SINE Alu 1 300 -9 1007 208 13 22 chr17 4423651 4423882 -81014598 + AluJo SINE Alu 71 299 -13 1825 125 4 4 chr17 4423889 4424170 -81014310 + AluY SINE Alu 5 285 -26 31 0 0 0 chr17 4424170 4424201 -81014279 + AT_rich Low_complexity Low_complexity 1 31 0 915 142 0 0 chr17 4424233 4424374 -81014106 - AluJb SINE Alu -4 308 168 728 85 0 19 chr17 4424496 4424602 -81013878 + AluSp/q SINE Alu 198 301 -12 2220 89 3 13 chr17 4424944 4425300 -81013180 - AluY SINE Alu 0 353 1 2124 92 20 3 chr17 4425300 4425595 -81012885 - AluSp SINE Alu -13 300 1 26 50 0 0 chr17 4425648 4425688 -81012792 + AT_rich Low_complexity Low_complexity 1 40 0 1844 133 25 3 chr17 4425689 4425975 -81012505 - AluSx SINE Alu -20 292 1 562 71 0 36 chr17 4426007 4426091 -81012389 + AluJb SINE Alu 84 164 -148 2218 86 0 3 chr17 4426229 4426521 -81011959 - AluSc SINE Alu -14 295 5 1232 124 0 0 chr17 4427066 4427244 -81011236 - AluSc SINE Alu 0 309 132 2194 105 0 3 chr17 4427244 4427540 -81010940 - AluSp SINE Alu -18 295 1 1923 129 0 17 chr17 4427540 4427835 -81010645 - AluJb SINE Alu -12 300 11 281 321 94 31 chr17 4427835 4428147 -81010333 - L1ME LINE L1 -355 5809 5479 2063 76 6 51 chr17 4428156 4428471 -81010009 + AluSg SINE Alu 2 302 -8 238 162 0 0 chr17 4428532 4428569 -81009911 - MLT1B LTR MaLR 0 390 354 780 199 13 0 chr17 4428612 4428768 -81009712 - MLT1B LTR MaLR -41 349 192 2119 107 0 7 chr17 4430061 4430373 -81008107 - AluY SINE Alu -13 298 1 831 229 28 17 chr17 4430387 4430566 -81007914 + AluJb SINE Alu 131 311 -1 2221 107 10 0 chr17 4430587 4430896 -81007584 + AluSp SINE Alu 1 312 -1 323 128 0 0 chr17 4431338 4431385 -81007095 + AluSp/q SINE Alu 204 250 -53 1063 147 17 60 chr17 4431385 4431617 -81006863 + AluJo SINE Alu 85 306 -6 2280 74 0 0 chr17 4431632 4431915 -81006565 + AluSx SINE Alu 13 295 -17 494 339 23 6 chr17 4431935 4432106 -81006374 - MLT1K LTR MaLR -282 306 133 336 48 0 0 chr17 4432340 4432382 -81006098 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2094 113 0 0 chr17 4432409 4432716 -81005764 - AluSq SINE Alu 0 309 3 1903 152 3 25 chr17 4433867 4434052 -81004428 - AluJb SINE Alu -4 308 131 2238 100 3 0 chr17 4434052 4434363 -81004117 - AluSx SINE Alu 0 312 1 1903 152 3 25 chr17 4434363 4434492 -81003988 - AluJb SINE Alu -181 131 1 2035 94 30 17 chr17 4435097 4435395 -81003085 + AluSx SINE Alu 5 306 -6 349 324 27 0 chr17 4435486 4435597 -81002883 + L2 LINE L2 3193 3306 -7 664 148 0 19 chr17 4435619 4435727 -81002753 + FRAM SINE Alu 62 167 -9 2281 103 3 0 chr17 4435785 4436095 -81002385 + AluSp SINE Alu 1 311 -2 311 347 134 14 chr17 4436119 4436420 -81002060 - L2 LINE L2 -228 3085 2741 2277 64 0 20 chr17 4436422 4436718 -81001762 - AluY SINE Alu -16 295 6 1896 232 96 45 chr17 4436764 4437021 -81001459 - L1ME3A LINE L1 -5 6165 5923 2033 84 24 14 chr17 4437021 4437308 -81001172 - AluSx SINE Alu -22 290 1 1896 232 96 45 chr17 4437308 4437447 -81001033 - L1ME3A LINE L1 -247 5923 5793 2177 124 0 6 chr17 4437447 4437761 -81000719 - AluSx SINE Alu 0 312 1 1896 232 96 45 chr17 4437761 4437988 -81000492 - L1ME3A LINE L1 -377 5793 5509 337 335 11 57 chr17 4438001 4438077 -81000403 - L2 LINE L2 -613 2701 2623 2152 111 3 0 chr17 4438077 4438384 -81000096 + AluSg SINE Alu 1 308 -2 337 335 11 57 chr17 4438384 4438483 -80999997 - L2 LINE L2 -691 2623 2534 1610 171 3 45 chr17 4438616 4438762 -80999718 + AluJo SINE Alu 1 129 -183 2201 95 3 0 chr17 4438762 4439057 -80999423 + AluSp SINE Alu 1 296 -17 1610 171 3 45 chr17 4439057 4439220 -80999260 + AluJo SINE Alu 129 297 -15 1674 169 28 0 chr17 4439492 4439776 -80998704 + AluJb SINE Alu 1 292 -20 2340 83 0 3 chr17 4439935 4440236 -80998244 + AluSc SINE Alu 1 300 -9 1620 182 30 0 chr17 4440315 4440612 -80997868 + AluJo SINE Alu 1 306 -6 2225 106 3 0 chr17 4441211 4441514 -80996966 - AluSp SINE Alu -9 304 1 254 300 56 0 chr17 4441549 4441639 -80996841 - MIR SINE MIR -70 192 98 1325 169 4 4 chr17 4442057 4442293 -80996187 + AluJo SINE Alu 1 236 -76 252 86 0 0 chr17 4442295 4442330 -80996150 + (A)n Simple_repeat Simple_repeat 1 35 0 1211 136 81 140 chr17 4442343 4442651 -80995829 + AluSq SINE Alu 2 291 -12 1859 144 6 13 chr17 4442661 4442974 -80995506 - AluSx SINE Alu -1 311 1 2040 91 63 0 chr17 4443251 4443537 -80994943 - AluSx SINE Alu -7 305 2 379 297 105 38 chr17 4444496 4444623 -80993857 - L2 LINE L2 -58 3255 3138 1712 139 49 7 chr17 4444623 4444910 -80993570 - AluJb SINE Alu -13 299 1 379 297 105 38 chr17 4444910 4445095 -80993385 - L2 LINE L2 -175 3138 2922 1958 136 7 3 chr17 4445212 4445514 -80992966 - AluJb SINE Alu -9 303 1 1910 143 17 0 chr17 4445631 4445924 -80992556 + AluSx SINE Alu 7 304 -8 2168 45 7 41 chr17 4446102 4446429 -80992051 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 4447463 4447489 -80990991 + (CAG)n Simple_repeat Simple_repeat 3 28 0 562 267 53 16 chr17 4447707 4447894 -80990586 - MIR SINE MIR -3 259 66 2141 78 0 19 chr17 4448194 4448501 -80989979 - AluSc SINE Alu -8 301 1 1984 86 52 0 chr17 4448681 4448982 -80989498 - AluSx SINE Alu 0 315 1 245 347 116 0 chr17 4449049 4449170 -80989310 - L2 LINE L2 -1 3271 3137 226 247 340 0 chr17 4449178 4449275 -80989205 + L2 LINE L2 3141 3270 -2 1076 93 0 0 chr17 4449426 4449565 -80988915 + AluSg SINE Alu 1 139 -171 361 75 0 0 chr17 4449570 4449623 -80988857 + Alu SINE Alu 250 302 0 371 243 103 26 chr17 4449701 4449874 -80988606 - MIR SINE MIR -10 252 63 880 260 76 63 chr17 4451932 4452214 -80986266 + L2 LINE L2 2211 2503 -811 2341 93 0 0 chr17 4452214 4452526 -80985954 - AluSp SINE Alu -1 312 1 880 260 76 63 chr17 4452526 4452701 -80985779 + L2 LINE L2 2503 2674 -640 2210 107 0 13 chr17 4452742 4453059 -80985421 - AluSq SINE Alu 0 313 1 284 226 113 0 chr17 4453068 4453192 -80985288 - L1M4 LINE L1 -2191 3955 3818 1347 109 10 0 chr17 4453192 4453385 -80985095 - AluSg/x SINE Alu -9 301 107 338 23 0 0 chr17 4453385 4453428 -80985052 + AluSg/x SINE Alu 92 134 -166 741 231 64 0 chr17 4453428 4453584 -80984896 + AluJo/FRAM SINE Alu 137 302 0 2005 183 23 76 chr17 4453606 4453942 -80984538 + L1M4 LINE L1 3951 4246 -1900 1724 107 133 0 chr17 4453942 4454205 -80984275 + AluSg SINE Alu 1 298 -2 2005 183 23 76 chr17 4454205 4454437 -80984043 + L1M4 LINE L1 4246 4489 -1657 2113 110 10 0 chr17 4454437 4454737 -80983743 + AluSg SINE Alu 1 303 -7 269 23 0 70 chr17 4454751 4454794 -80983686 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 1562 171 19 20 chr17 4454795 4454948 -80983532 + L1M4 LINE L1 4741 4893 -1253 2284 65 10 19 chr17 4454948 4455256 -80983224 - AluY SINE Alu -5 306 2 1562 171 19 20 chr17 4455256 4455542 -80982938 + L1M4 LINE L1 4893 5308 -838 1774 98 0 8 chr17 4455543 4455788 -80982692 + AluSx SINE Alu 1 243 -69 2781 12 0 6 chr17 4455807 4456127 -80982353 + AluYb8 SINE Alu 1 318 0 783 151 22 29 chr17 4456132 4456271 -80982209 + FRAM SINE Alu 1 138 -38 1828 175 13 34 chr17 4456298 4456721 -80981759 + L1M4 LINE L1 5254 5667 -507 190 0 0 62 chr17 4456821 4456853 -80981627 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1907 62 0 4 chr17 4456857 4457098 -80981382 - AluSg SINE Alu -37 273 34 2244 93 0 3 chr17 4458191 4458492 -80979988 + AluSx SINE Alu 1 300 -12 1343 187 37 23 chr17 4460390 4460562 -80977918 - AluJo SINE Alu -8 304 125 2068 138 0 0 chr17 4460562 4460874 -80977606 - AluSx SINE Alu 0 312 1 1343 187 37 23 chr17 4460874 4461001 -80977479 - AluJo SINE Alu -187 125 1 888 187 22 39 chr17 4461002 4461014 -80977466 - L1MC1 LINE L1 0 6333 6322 1946 103 4 0 chr17 4461014 4461277 -80977203 - AluSp SINE Alu -12 301 38 2223 94 0 7 chr17 4461277 4461576 -80976904 - AluSx SINE Alu -15 297 1 888 187 22 39 chr17 4461576 4461744 -80976736 - L1MC1 LINE L1 -9 6324 6155 691 279 67 41 chr17 4461744 4462059 -80976421 + L2 LINE L2 2974 3296 -17 818 202 5 58 chr17 4462785 4462895 -80975585 + MER45A DNA AcHobo 1 98 -1483 2209 82 10 0 chr17 4462895 4463188 -80975292 - AluY SINE Alu -15 296 1 818 202 5 58 chr17 4463188 4463265 -80975215 + MER45A DNA AcHobo 98 178 0 413 245 9 107 chr17 4464006 4464083 -80974397 - MIR SINE MIR -17 245 162 2118 102 3 7 chr17 4464083 4464378 -80974102 - AluSx SINE Alu -18 294 1 413 245 9 107 chr17 4464378 4464534 -80973946 - MIR SINE MIR -100 162 34 2451 65 0 7 chr17 4464576 4464885 -80973595 - AluY SINE Alu -4 307 1 1969 135 0 0 chr17 4464885 4465181 -80973299 - AluSx SINE Alu -16 296 1 2414 77 0 0 chr17 4465352 4465663 -80972817 - AluY SINE Alu 0 311 1 1926 97 56 3 chr17 4465755 4466043 -80972437 - AluSc SINE Alu -6 303 1 292 342 13 13 chr17 4466049 4466066 -80972414 - L1MA10 LINE L1 0 6334 6318 913 212 8 54 chr17 4466066 4466307 -80972173 - L1ME2 LINE L1 -9 6155 5926 2131 70 35 3 chr17 4466308 4466593 -80971887 + AluSp SINE Alu 1 294 -19 1307 117 187 44 chr17 4466602 4466829 -80971651 + AluJb SINE Alu 1 275 -37 2399 60 0 7 chr17 4466829 4467131 -80971349 + AluY SINE Alu 1 300 -11 1307 117 187 44 chr17 4467131 4467176 -80971304 + AluJb SINE Alu 275 312 0 1325 223 72 5 chr17 4467178 4467596 -80970884 + L1ME2 LINE L1 5326 5771 -393 365 314 116 0 chr17 4467648 4467769 -80970711 + L2 LINE L2 3137 3271 -1 25 75 0 0 chr17 4467934 4467987 -80970493 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr17 4468169 4468204 -80970276 + GC_rich Low_complexity Low_complexity 1 35 0 36 77 0 0 chr17 4468234 4468312 -80970168 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 4468698 4468721 -80969759 + GC_rich Low_complexity Low_complexity 1 23 0 1690 157 48 0 chr17 4469859 4470153 -80968327 - AluJo SINE Alu -4 308 1 2230 99 0 0 chr17 4471522 4471825 -80966655 + AluSq SINE Alu 1 303 -10 2100 62 87 3 chr17 4472448 4472737 -80965743 - AluSq SINE Alu 0 313 1 1376 170 33 33 chr17 4472974 4473274 -80965206 - AluJb SINE Alu -12 300 1 1185 111 0 0 chr17 4473281 4473443 -80965037 - AluSq SINE Alu -18 295 134 2160 120 0 0 chr17 4473443 4473752 -80964728 - AluSc SINE Alu 0 309 1 731 256 0 55 chr17 4473752 4473951 -80964529 + L1ME2 LINE L1 5925 6112 -52 2064 128 0 0 chr17 4474144 4474156 -80964324 - AluSx SINE Alu -15 297 286 195 69 0 0 chr17 4474156 4474185 -80964295 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2064 128 0 0 chr17 4474185 4474469 -80964011 - AluSx SINE Alu -25 287 1 387 267 125 114 chr17 4474578 4474749 -80963731 - L1ME2 LINE L1 -368 5753 5585 2019 109 4 0 chr17 4474749 4475024 -80963456 + AluSx SINE Alu 13 288 -24 387 267 125 114 chr17 4475024 4475348 -80963132 - L1ME2 LINE L1 -536 5585 5251 344 268 39 4 chr17 4476223 4476459 -80962021 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 2166 104 0 3 chr17 4477259 4477558 -80960922 + AluSx SINE Alu 1 298 -14 2178 91 0 7 chr17 4478540 4478836 -80959644 + AluSc SINE Alu 1 294 -15 2226 95 0 0 chr17 4478836 4479132 -80959348 + AluY SINE Alu 1 296 -15 1344 96 6 6 chr17 4480875 4481052 -80957428 + AluSq SINE Alu 1 177 -136 217 0 0 0 chr17 4481089 4481111 -80957369 + (TTG)n Simple_repeat Simple_repeat 1 22 -334 2412 72 10 0 chr17 4481111 4481403 -80957077 - AluSp SINE Alu -20 293 1 217 0 0 0 chr17 4481403 4481421 -80957059 + (TTG)n Simple_repeat Simple_repeat 21 356 0 217 0 0 0 chr17 4481421 4481445 -80957035 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2121 98 40 0 chr17 4481445 4481716 -80956764 - AluSq SINE Alu -5 308 1 2556 46 7 3 chr17 4481733 4482035 -80956445 - AluY SINE Alu -8 303 1 2571 62 7 0 chr17 4482055 4482361 -80956119 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 4482431 4482460 -80956020 + AT_rich Low_complexity Low_complexity 1 29 0 2051 154 3 3 chr17 4482542 4482854 -80955626 - AluJb SINE Alu 0 312 1 1821 103 96 21 chr17 4483220 4483501 -80954979 + AluSq SINE Alu 1 302 -11 1325 87 0 0 chr17 4483502 4483663 -80954817 + AluSq SINE Alu 134 294 -19 372 315 61 12 chr17 4484940 4485105 -80953375 + MIR SINE MIR 13 185 -77 302 277 107 9 chr17 4485102 4485214 -80953266 - L2 LINE L2 0 3313 3191 * 840 148 17 126 chr17 4485219 4485276 -80953204 - MER3 DNA MER1_type -3 206 144 2374 96 3 19 chr17 4485276 4485451 -80953029 - AluSx SINE Alu -3 309 140 2038 96 74 0 chr17 4485451 4485722 -80952758 - AluSg SINE Alu -17 293 3 2374 96 3 19 chr17 4485722 4485860 -80952620 - AluSx SINE Alu -172 140 1 840 148 17 126 chr17 4485860 4485907 -80952573 - MER3 DNA MER1_type -65 144 93 2368 92 3 13 chr17 4485907 4486211 -80952269 + AluSx SINE Alu 1 301 -11 840 148 17 126 chr17 4486211 4486335 -80952145 - MER3 DNA MER1_type -116 93 2 1897 162 11 0 chr17 4486480 4486758 -80951722 - AluJo SINE Alu -31 281 1 2396 109 0 6 chr17 4486769 4487081 -80951399 - AluSx SINE Alu -2 310 1 642 153 90 0 chr17 4487114 4487225 -80951255 + FLAM_A SINE Alu 1 121 -12 882 174 31 0 chr17 4487291 4487452 -80951028 - AluJo/FRAM SINE Alu 0 302 137 1944 138 7 16 chr17 4487452 4487757 -80950723 - AluJb SINE Alu -10 302 1 2550 65 10 3 chr17 4487765 4488074 -80950406 - AluSp SINE Alu 0 313 3 2351 100 7 0 chr17 4488106 4488415 -80950065 + AluY SINE Alu 1 311 0 2325 108 0 0 chr17 4488871 4489176 -80949304 - AluSg SINE Alu -5 305 1 423 181 252 0 chr17 4489312 4489439 -80949041 - MIR SINE MIR -13 249 91 2337 106 0 0 chr17 4489535 4489836 -80948644 - AluSx SINE Alu -11 301 1 217 311 78 57 chr17 4490024 4490268 -80948212 - L2 LINE L2 -188 3084 2836 778 228 0 0 chr17 4490274 4490432 -80948048 + FRAM SINE Alu 2 159 -7 2453 102 0 3 chr17 4490505 4490818 -80947662 - AluSx SINE Alu 0 312 1 2276 98 10 0 chr17 4490825 4491120 -80947360 - AluSp SINE Alu -15 298 1 590 143 151 0 chr17 4491120 4491239 -80947241 - FLAM_C SINE Alu -5 138 2 2622 43 0 10 chr17 4491242 4491546 -80946934 - AluY SINE Alu -10 301 1 2416 82 0 7 chr17 4491546 4491850 -80946630 - AluSx SINE Alu -9 303 1 281 149 0 0 chr17 4491853 4491900 -80946580 - AluSq/x SINE Alu -169 133 87 2204 106 0 3 chr17 4491901 4492185 -80946295 + AluSq SINE Alu 1 283 -30 258 56 0 0 chr17 4492277 4492313 -80946167 + (A)n Simple_repeat Simple_repeat 1 36 0 294 111 0 0 chr17 4492316 4492361 -80946119 - AluSq/x SINE Alu -199 104 60 1762 166 0 11 chr17 4492361 4492639 -80945841 + AluJb SINE Alu 22 296 -16 2657 61 0 0 chr17 4492643 4492954 -80945526 + AluY SINE Alu 1 311 0 431 276 41 8 chr17 4493192 4493315 -80945165 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 4493901 4493994 -80944486 + GA-rich Low_complexity Low_complexity 3 90 0 2096 111 7 0 chr17 4496203 4496506 -80941974 + AluSx SINE Alu 1 305 0 341 298 118 0 chr17 4497374 4497535 -80940945 + MIR SINE MIR 57 236 -26 657 277 43 77 chr17 4497571 4497752 -80940728 + L2 LINE L2 3021 3190 -123 2176 108 0 29 chr17 4497752 4498058 -80940422 + AluSx SINE Alu 1 297 -15 657 277 43 77 chr17 4498058 4498176 -80940304 + L2 LINE L2 3190 3310 -3 2572 58 0 0 chr17 4499804 4500099 -80938381 - AluY SINE Alu -16 295 1 414 0 0 0 chr17 4500796 4500842 -80937638 + (TG)n Simple_repeat Simple_repeat 1 46 0 316 95 0 0 chr17 4500911 4500953 -80937527 + MER4E LTR ERV1 651 692 -74 2583 34 3 10 chr17 4502798 4503094 -80935386 + AluY SINE Alu 3 296 -15 2460 93 0 3 chr17 4504051 4504364 -80934116 + AluSx SINE Alu 1 312 0 660 224 105 53 chr17 4504492 4504720 -80933760 - MIR SINE MIR 0 262 23 2432 98 7 0 chr17 4504851 4505157 -80933323 - AluSx SINE Alu -4 308 1 1104 163 26 13 chr17 4505698 4505925 -80932555 - L1MB3 LINE L1 -1 6182 5953 2143 102 3 24 chr17 4506495 4506790 -80931690 - AluSx SINE Alu -15 297 9 812 204 7 0 chr17 4507538 4507690 -80930790 - FRAM SINE Alu -13 153 1 324 0 0 0 chr17 4508087 4508123 -80930357 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 858 152 65 0 chr17 4508123 4508261 -80930219 - AluSq SINE Alu -32 281 135 663 167 18 0 chr17 4508757 4508871 -80929609 + FLAM_C SINE Alu 2 117 -26 180 200 0 0 chr17 4508891 4508931 -80929549 + GA-rich Low_complexity Low_complexity 1 40 0 350 206 109 11 chr17 4509126 4509218 -80929262 + MIR SINE MIR 24 124 -138 2544 52 0 0 chr17 4509229 4509516 -80928964 - AluY SINE Alu -24 287 1 983 96 0 22 chr17 4509519 4509655 -80928825 - AluSq SINE Alu -180 133 1 421 198 62 0 chr17 4509656 4509752 -80928728 + MIR SINE MIR 113 214 -48 2384 77 3 3 chr17 4510430 4510729 -80927751 - AluSp SINE Alu -14 299 1 495 157 0 0 chr17 4510799 4510888 -80927592 - AluJ/FRAM SINE Alu -8 304 216 443 293 60 20 chr17 4510945 4511095 -80927385 + L2 LINE L2 3117 3272 0 286 327 96 0 chr17 4511213 4511369 -80927111 - L3b LINE CR1 -196 1387 1217 2439 97 3 0 chr17 4512575 4512884 -80925596 + AluSx SINE Alu 1 310 -2 383 192 0 67 chr17 4513625 4513818 -80924662 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 258 95 0 0 chr17 4513979 4514021 -80924459 + (A)n Simple_repeat Simple_repeat 1 42 0 897 73 0 0 chr17 4514021 4514131 -80924349 - AluSq/x SINE Alu -202 110 1 1265 110 12 6 chr17 4514162 4514335 -80924145 + AluSg/x SINE Alu 138 311 -1 364 207 0 46 chr17 4514342 4514429 -80924051 - Tigger5 DNA MER2_type -2240 83 1 2130 124 0 3 chr17 4514842 4515165 -80923315 + AluSp SINE Alu 3 324 0 2430 99 0 0 chr17 4515566 4515879 -80922601 + AluSp SINE Alu 1 313 0 892 138 9 138 chr17 4515983 4516048 -80922432 - MER5A DNA MER1_type 0 189 117 2162 116 3 7 chr17 4516048 4516340 -80922140 + AluSx SINE Alu 1 291 -21 182 80 0 0 chr17 4516347 4516372 -80922108 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 892 138 9 138 chr17 4516372 4516515 -80921965 - MER5A DNA MER1_type -78 111 1 477 181 71 121 chr17 4516526 4516689 -80921791 + MER5B DNA MER1_type 4 159 -19 8094 53 2 15 chr17 4516689 4517668 -80920812 - LTR5 LTR ERVK -3 966 1 477 181 71 121 chr17 4517668 4517686 -80920794 + MER5B DNA MER1_type 159 176 -2 290 349 101 33 chr17 4517878 4518061 -80920419 - L2 LINE L2 -1968 1346 1132 2060 104 3 55 chr17 4518061 4518223 -80920257 - AluSg SINE Alu -17 293 153 2326 106 0 3 chr17 4518223 4518525 -80919955 - AluSg SINE Alu -3 307 7 2060 104 3 55 chr17 4518525 4518671 -80919809 - AluSg SINE Alu -157 153 1 290 349 101 33 chr17 4518671 4518794 -80919686 - L2 LINE L2 -2182 1132 1019 2214 80 0 32 chr17 4519154 4519466 -80919014 + AluSq SINE Alu 1 302 -11 2297 80 3 16 chr17 4519472 4519784 -80918696 + AluSp SINE Alu 1 308 -5 194 319 42 0 chr17 4519802 4519874 -80918606 - L2 LINE L2 -356 2958 2884 276 282 13 13 chr17 4521195 4521273 -80917207 - L2 LINE L2 -9 3263 3186 1584 134 90 43 chr17 4521301 4521578 -80916902 + AluJb SINE Alu 1 290 -22 2197 105 0 13 chr17 4521824 4522128 -80916352 + AluSx SINE Alu 1 300 -12 249 353 29 29 chr17 4522237 4522376 -80916104 - MLT1L LTR MaLR -287 328 190 608 199 12 53 chr17 4522516 4522687 -80915793 - Charlie2 DNA MER1_type -7 2855 2692 1425 98 36 22 chr17 4523164 4523389 -80915091 - AluY SINE Alu 0 311 84 435 324 28 28 chr17 4523464 4523643 -80914837 + Charlie2 DNA MER1_type 1 179 -2603 2104 115 0 16 chr17 4523644 4523981 -80914499 - AluY SINE Alu 0 311 3 86 103 0 0 chr17 4524061 4524333 -80914147 + GC_rich Low_complexity Low_complexity 1 272 0 329 234 120 53 chr17 4524563 4524710 -80913770 + L1M4 LINE L1 4469 4636 -1510 1990 101 8 0 chr17 4524710 4524967 -80913513 - AluSp SINE Alu -18 295 37 329 234 120 53 chr17 4524967 4525028 -80913452 + L1M4 LINE L1 4636 4691 -1455 2456 48 35 7 chr17 4525060 4525349 -80913131 + AluY SINE Alu 1 297 -14 1872 153 0 0 chr17 4525349 4525623 -80912857 - AluSx SINE Alu -37 275 1 302 289 13 0 chr17 4525795 4525871 -80912609 - LTR67 LTR ERVL -380 177 101 1937 108 0 0 chr17 4525945 4526196 -80912284 + AluSg SINE Alu 54 304 -6 602 319 72 17 chr17 4526260 4526552 -80911928 + L2 LINE L2 1121 1428 -1886 248 222 42 0 chr17 4526580 4526652 -80911828 + L2 LINE L2 1541 1615 -1699 1954 133 3 10 chr17 4526652 4526945 -80911535 - AluSg SINE Alu -19 291 1 399 138 0 0 chr17 4526983 4527041 -80911439 - AluS SINE Alu -250 58 1 * 663 240 58 0 chr17 4527041 4527192 -80911288 + MER20 DNA MER1_type 55 214 -5 2303 213 111 27 chr17 4527318 4527430 -80911050 - L1M4 LINE L1 -871 5275 5174 2285 116 6 0 chr17 4527430 4527741 -80910739 - AluSp SINE Alu 0 313 1 2303 213 111 27 chr17 4527741 4528216 -80910264 - L1M4 LINE L1 -972 5174 4609 2057 133 7 0 chr17 4528216 4528509 -80909971 + AluSq SINE Alu 1 295 -18 2303 213 111 27 chr17 4528509 4528671 -80909809 - L1M4 LINE L1 -1537 4609 4462 2435 96 0 0 chr17 4528673 4528976 -80909504 - AluSc SINE Alu -4 305 3 459 281 6 18 chr17 4528979 4529143 -80909337 - AluSq SINE Alu -5 308 147 264 217 103 69 chr17 4529509 4529684 -80908796 + Charlie7 DNA MER1_type 508 688 -1924 1365 169 110 0 chr17 4529827 4530063 -80908417 - AluJo SINE Alu -17 295 34 240 234 0 0 chr17 4530079 4530126 -80908354 + L2 LINE L2 3255 3301 -12 2361 99 0 3 chr17 4530128 4530431 -80908049 + AluSq SINE Alu 1 302 -11 2477 154 20 18 chr17 4530431 4530886 -80907594 + LTR62 LTR ERVK 262 717 -2 459 252 25 0 chr17 4531060 4531179 -80907301 - AluSq/x SINE Alu -189 123 2 1537 176 20 36 chr17 4531255 4531556 -80906924 - AluSx SINE Alu -16 296 1 330 257 37 37 chr17 4531677 4531786 -80906694 - MIR SINE MIR 0 262 154 2036 128 44 3 chr17 4531831 4532129 -80906351 - AluSg SINE Alu 0 310 1 2212 119 7 3 chr17 4532139 4532441 -80906039 - AluSx SINE Alu -9 303 1 2397 69 0 3 chr17 4532519 4532810 -80905670 + AluY SINE Alu 4 293 -18 197 302 32 0 chr17 4533167 4533230 -80905250 + L2 LINE L2 2714 2778 -536 2308 89 27 0 chr17 4533236 4533528 -80904952 + AluSx SINE Alu 1 300 -12 917 122 0 0 chr17 4534725 4534848 -80903632 + AluSq/x SINE Alu 11 133 -179 2344 100 0 0 chr17 4534851 4535160 -80903320 + AluY SINE Alu 1 309 -2 244 256 44 22 chr17 4535161 4535251 -80903229 + Charlie2 DNA MER1_type 219 310 -2552 1481 172 4 32 chr17 4535324 4535603 -80902877 - AluJb SINE Alu -24 288 18 275 246 111 40 chr17 4535611 4535737 -80902743 + Charlie2 DNA MER1_type 1931 2065 -797 2011 108 45 7 chr17 4536066 4536353 -80902127 + AluSp SINE Alu 1 298 -15 622 242 31 25 chr17 4536363 4536524 -80901956 - MER5B DNA MER1_type 0 178 17 2234 100 4 0 chr17 4536641 4536960 -80901520 - AluSx SINE Alu 0 320 1 2798 13 0 13 chr17 4537063 4537374 -80901106 - AluYa5 SINE Alu -4 307 1 2064 121 0 29 chr17 4537848 4538155 -80900325 - AluSx SINE Alu -14 298 1 2395 83 0 7 chr17 4538178 4538478 -80900002 - AluY SINE Alu -13 298 1 2522 77 0 3 chr17 4539533 4539845 -80898635 - AluY SINE Alu 0 311 1 1991 134 10 3 chr17 4539895 4540187 -80898293 - AluJo SINE Alu -9 303 10 639 256 152 61 chr17 4540332 4540793 -80897687 - LTR33 LTR ERVL -9 512 10 669 326 74 47 chr17 4540834 4541282 -80897198 + L2 LINE L2 2183 2642 -672 320 78 0 0 chr17 4541308 4541359 -80897121 - AluY SINE Alu -169 132 82 1549 107 9 5 chr17 4541359 4541575 -80896905 - AluY SINE Alu -94 217 1 860 269 70 60 chr17 4541945 4542443 -80896037 - MLT1J LTR MaLR -8 503 1 1627 181 0 21 chr17 4542502 4542790 -80895690 - AluJo SINE Alu -30 282 1 294 283 55 7 chr17 4543120 4543265 -80895215 + L1M4 LINE L1 4776 4927 -1219 1997 143 7 7 chr17 4543507 4543801 -80894679 - AluSx SINE Alu -13 299 6 802 117 23 8 chr17 4544083 4544211 -80894269 - AluJb SINE Alu -7 305 176 926 154 7 20 chr17 4546028 4546177 -80892303 - FRAM SINE Alu -12 164 18 743 203 0 8 chr17 4547089 4547207 -80891273 - FLAM_C SINE Alu -25 118 2 545 269 110 28 chr17 4547312 4547494 -80890986 + MIR3 SINE MIR 9 205 -3 579 224 165 72 chr17 4547551 4547648 -80890832 - MIR SINE MIR -2 260 173 452 184 39 0 chr17 4547648 4547751 -80890729 - L1MB8 LINE L1 0 6178 6072 579 224 165 72 chr17 4547751 4547890 -80890590 - MIR SINE MIR -89 173 2 2725 48 0 3 chr17 4551088 4551401 -80887079 + AluSx SINE Alu 1 312 0 1930 81 0 53 chr17 4551412 4551734 -80886746 + AluSg SINE Alu 5 309 -1 2441 91 0 3 chr17 4551891 4552199 -80886281 + AluSx SINE Alu 3 309 -3 2123 87 45 7 chr17 4552934 4553223 -80885257 + AluSp SINE Alu 2 301 -12 312 339 73 60 chr17 4553506 4553890 -80884590 + L2 LINE L2 2864 3252 -20 614 238 144 5 chr17 4553894 4554096 -80884384 - L1MEc LINE L1 -5955 441 212 1296 116 50 5 chr17 4554104 4554303 -80884177 + AluJb SINE Alu 1 208 -104 570 235 73 45 chr17 4554355 4554534 -80883946 - L1MEc LINE L1 -6174 222 39 1913 170 7 0 chr17 4554542 4554842 -80883638 - AluJb SINE Alu -10 302 1 2524 74 0 7 chr17 4555013 4555322 -80883158 - AluSq SINE Alu -2 311 5 27 0 0 0 chr17 4555332 4555359 -80883121 + AT_rich Low_complexity Low_complexity 1 27 0 451 312 57 6 chr17 4555532 4555689 -80882791 + MIR SINE MIR 24 188 -74 194 369 138 22 chr17 4556037 4556392 -80882088 + L2 LINE L2 2490 2885 -429 344 191 286 19 chr17 4556403 4556508 -80881972 - FLAM_A SINE Alu 0 133 1 366 244 0 52 chr17 4556509 4556624 -80881856 + MER63 DNA MER1_type 7 741 -321 542 176 29 114 chr17 4556767 4556840 -80881640 + LTR41 LTR ERVL 580 658 -115 1744 161 0 34 chr17 4556840 4557138 -80881342 - AluJb SINE Alu -24 288 1 2050 116 0 36 chr17 4557148 4557450 -80881030 - AluSx SINE Alu -21 291 1 542 176 29 114 chr17 4557450 4557575 -80880905 + LTR41 LTR ERVL 667 771 -2 818 162 0 22 chr17 4557636 4557772 -80880708 + FLAM_C SINE Alu 1 133 0 2414 61 14 3 chr17 4557872 4558169 -80880311 + AluY SINE Alu 1 300 -11 2191 109 0 10 chr17 4558181 4558483 -80879997 + AluSc SINE Alu 1 299 -10 2650 61 0 0 chr17 4560067 4560377 -80878103 + AluY SINE Alu 2 311 0 2149 95 20 10 chr17 4560503 4560797 -80877683 - AluSx SINE Alu -15 297 1 303 252 47 65 chr17 4560923 4561030 -80877450 + L1MDa LINE L1 1984 2088 -4452 265 208 56 14 chr17 4561668 4561740 -80876740 - MIR SINE MIR -75 187 113 232 83 83 21 chr17 4562042 4562090 -80876390 + LTR41 LTR ERVL 711 761 -12 2097 110 0 20 chr17 4562867 4563167 -80875313 - AluSx SINE Alu -18 294 1 1195 151 31 109 chr17 4563708 4564319 -80874161 - MER4C LTR ERV1 0 465 1 1466 131 17 37 chr17 4565429 4565726 -80872754 - AluY SINE Alu -1 310 20 226 121 0 0 chr17 4565765 4565798 -80872682 + Alu SINE Alu 92 124 -179 344 266 41 0 chr17 4565937 4566176 -80872304 + G-rich Low_complexity Low_complexity 1 248 0 296 204 58 29 chr17 4566180 4566352 -80872128 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 1865 106 4 34 chr17 4567784 4568049 -80870431 + AluSq SINE Alu 1 257 -56 2537 68 0 0 chr17 4568064 4568360 -80870120 + AluY SINE Alu 1 296 -15 2355 68 41 0 chr17 4568360 4568655 -80869825 + AluY SINE Alu 1 307 -4 1424 124 0 16 chr17 4568655 4568849 -80869631 + AluSq SINE Alu 108 298 -15 2206 123 0 3 chr17 4570318 4570627 -80867853 - AluSx SINE Alu -4 308 1 1596 107 0 30 chr17 4571317 4571550 -80866930 - AluSg/x SINE Alu 0 312 87 2376 80 0 0 chr17 4572389 4572675 -80865805 + AluSq SINE Alu 25 310 -3 2245 119 3 0 chr17 4574357 4574659 -80863821 - AluSx SINE Alu -9 303 1 905 173 33 75 chr17 4575058 4575232 -80863248 + MIR SINE MIR 23 188 -74 2423 83 3 0 chr17 4575232 4575532 -80862948 + AluSx SINE Alu 1 301 -11 905 173 33 75 chr17 4575532 4575571 -80862909 + MIR SINE MIR 188 227 -35 1818 179 3 10 chr17 4575614 4575916 -80862564 + AluJo SINE Alu 5 304 -8 551 302 148 0 chr17 4576435 4576637 -80861843 + MIR SINE MIR 27 258 -4 2319 81 3 0 chr17 4576640 4576948 -80861532 - AluSx SINE Alu 0 309 1 2436 81 3 0 chr17 4576977 4577274 -80861206 + AluSp SINE Alu 1 298 -15 2386 82 0 3 chr17 4577301 4577593 -80860887 + AluSq SINE Alu 1 291 -22 212 303 13 13 chr17 4577744 4577820 -80860660 + L2 LINE L2 3016 3091 -181 2362 66 0 10 chr17 4578008 4578322 -80860158 + AluSx SINE Alu 1 311 0 1817 136 13 46 chr17 4578462 4578764 -80859716 + AluJo SINE Alu 1 292 -20 351 234 85 11 chr17 4578874 4578968 -80859512 + L2 LINE L2 3182 3282 -31 2404 86 0 3 chr17 4579045 4579346 -80859134 + AluSc SINE Alu 1 300 -9 186 296 155 0 chr17 4579346 4579417 -80859063 - MIR SINE MIR -116 146 65 1095 204 13 22 chr17 4579417 4579648 -80858832 + AluJo SINE Alu 71 299 -13 2180 75 4 4 chr17 4579654 4579966 -80858514 + AluY SINE Alu 4 315 0 978 141 0 0 chr17 4579998 4580140 -80858340 - AluJb SINE Alu -3 309 168 832 176 8 0 chr17 4580227 4580358 -80858122 + FLAM_C SINE Alu 1 132 -1 2052 113 7 39 chr17 4580377 4580687 -80857793 + AluSx SINE Alu 1 300 -12 2737 172 62 26 chr17 4580690 4580831 -80857649 - L1MA4 LINE L1 -11 6289 6155 2270 125 0 0 chr17 4580831 4581136 -80857344 - AluSx SINE Alu -7 305 1 2737 172 62 26 chr17 4581136 4581603 -80856877 - L1MA4 LINE L1 -145 6155 5659 1099 168 0 22 chr17 4581597 4581776 -80856704 - AluJb SINE Alu -4 308 134 * 1239 169 15 140 chr17 4581604 4581776 -80856704 - AluJo SINE Alu -1 301 109 198 0 0 0 chr17 4581776 4581798 -80856682 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2278 81 0 3 chr17 4581798 4582083 -80856397 - AluY SINE Alu -27 284 1 1239 169 15 140 chr17 4582083 4582297 -80856183 - AluJo SINE Alu -191 111 2 1699 148 10 30 chr17 4582086 4582105 -80856375 - AluJb SINE Alu 0 312 294 415 0 0 0 chr17 4582105 4582151 -80856329 + (TTTA)n Simple_repeat Simple_repeat 2 120 0 1699 148 10 30 chr17 4582151 4582435 -80856045 - AluJb SINE Alu -18 294 2 987 144 0 0 chr17 4582435 4582608 -80855872 - L1MA4 LINE L1 -634 5666 5494 313 128 0 169 chr17 4582609 4582761 -80855719 - Alu SINE Alu 0 302 236 2286 84 0 16 chr17 4582761 4583070 -80855410 - AluY SINE Alu -7 304 1 189 0 0 0 chr17 4583072 4583093 -80855387 + (T)n Simple_repeat Simple_repeat 1 21 0 804 140 0 44 chr17 4583100 4583236 -80855244 - AluJb SINE Alu -182 130 1 443 99 33 0 chr17 4583236 4583327 -80855153 - L1MA4 LINE L1 -812 5488 5395 3762 152 18 47 chr17 4583334 4583401 -80855079 - L1MB7 LINE L1 0 6184 6117 2112 137 0 6 chr17 4583401 4583714 -80854766 + AluJb SINE Alu 1 311 -1 3762 152 18 47 chr17 4583714 4584034 -80854446 - L1MB7 LINE L1 -67 6117 5825 1574 170 0 74 chr17 4584034 4584370 -80854110 - AluJo SINE Alu -1 311 1 3762 152 18 47 chr17 4584370 4584711 -80853769 - L1MB7 LINE L1 -359 5825 5476 720 155 0 0 chr17 4584730 4584833 -80853647 - FRAM SINE Alu -37 139 37 481 95 0 0 chr17 4584833 4584907 -80853573 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 4584907 4585205 -80853275 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 4585215 4585349 -80853131 + AluJ SINE Alu 1 135 -177 2172 99 14 3 chr17 4585349 4585642 -80852838 + AluSg SINE Alu 1 296 -14 2061 141 0 3 chr17 4586465 4586778 -80851702 - AluSx SINE Alu 0 312 1 241 294 76 22 chr17 4586798 4586890 -80851590 - MIR3 SINE MIR -52 156 60 184 311 54 27 chr17 4588012 4588086 -80850394 + MIR3 SINE MIR 110 185 -23 829 216 6 0 chr17 4588184 4588346 -80850134 + AluJ SINE Alu 134 296 -16 2132 111 7 0 chr17 4588349 4588646 -80849834 + AluSp SINE Alu 1 299 -14 2074 128 0 0 chr17 4588655 4588953 -80849527 - AluY SINE Alu -13 298 1 1906 151 7 3 chr17 4589667 4589966 -80848514 + AluJo SINE Alu 4 303 -9 365 345 14 20 chr17 4590443 4590591 -80847889 - MIR SINE MIR 0 262 116 2589 43 0 0 chr17 4590665 4590968 -80847512 - AluY SINE Alu -8 303 1 2053 107 40 3 chr17 4593146 4593445 -80845035 - AluSx SINE Alu -2 310 1 2348 58 0 3 chr17 4593476 4593768 -80844712 + AluY SINE Alu 1 291 -20 1140 259 22 13 chr17 4595438 4595697 -80842783 - MER58B DNA MER1_type -2079 341 77 2325 95 0 0 chr17 4595697 4596001 -80842479 + AluSx SINE Alu 1 304 -8 1140 259 22 13 chr17 4596001 4596054 -80842426 - MER58B DNA MER1_type -2343 77 26 2292 87 0 3 chr17 4596064 4596362 -80842118 - AluSg SINE Alu -13 297 1 2203 87 0 31 chr17 4596375 4596696 -80841784 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 4596888 4597025 -80841455 - AluSq/x SINE Alu -180 133 1 246 32 0 0 chr17 4600529 4600560 -80837920 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2116 85 0 0 chr17 4600815 4601086 -80837394 + AluSx SINE Alu 24 294 -18 1988 113 23 17 chr17 4601211 4601513 -80836967 + AluSg SINE Alu 1 304 -6 2267 71 3 22 chr17 4601547 4601858 -80836622 - AluSp SINE Alu -8 305 1 271 295 0 0 chr17 4602502 4602607 -80835873 + (CAG)n Simple_repeat Simple_repeat 1 105 0 330 301 9 44 chr17 4602641 4602900 -80835580 + CT-rich Low_complexity Low_complexity 1 249 0 275 293 20 14 chr17 4602931 4603078 -80835402 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 4603464 4603514 -80834966 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 4604044 4604084 -80834396 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 4604814 4604950 -80833530 + MIR SINE MIR 40 188 -74 321 341 40 8 chr17 4607659 4607785 -80830695 - MIR SINE MIR -59 149 20 21 0 0 0 chr17 4612018 4612039 -80826441 + GC_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr17 4612169 4612209 -80826271 + GC_rich Low_complexity Low_complexity 1 40 0 2223 76 0 7 chr17 4616727 4617015 -80821465 - AluSc SINE Alu -23 286 1 969 159 0 69 chr17 4617031 4617220 -80821260 - FRAM SINE Alu 0 176 1 397 231 58 70 chr17 4617222 4617378 -80821102 - MER5A DNA MER1_type 0 189 36 217 217 43 0 chr17 4617627 4617673 -80820807 - MIR SINE MIR -92 170 123 1680 133 13 53 chr17 4618125 4618426 -80820054 + AluJo SINE Alu 1 289 -23 2304 88 0 3 chr17 4618436 4618733 -80819747 + AluSx SINE Alu 1 296 -16 687 138 0 4 chr17 4619327 4619467 -80819013 + L1M LINE L1 5278 5413 -741 584 159 0 37 chr17 4619469 4619576 -80818904 + FLAM_A SINE Alu 40 142 0 337 179 13 0 chr17 4619582 4619660 -80818820 + AluSp/q SINE Alu 225 303 0 2727 88 21 0 chr17 4619663 4620093 -80818387 + L1MA1 LINE L1 5755 6193 -109 2425 45 3 16 chr17 4620140 4620449 -80818031 + AluY SINE Alu 1 305 -6 954 133 0 0 chr17 4620618 4620753 -80817727 + AluSq/x SINE Alu 1 135 -177 1927 112 24 7 chr17 4620753 4621049 -80817431 + AluSg SINE Alu 1 301 -9 887 131 0 5 chr17 4621536 4621941 -80816539 + (CA)n Simple_repeat Simple_repeat 1 402 0 1987 93 29 0 chr17 4622227 4622507 -80815973 - AluSx SINE Alu -11 301 14 260 207 52 60 chr17 4622628 4622744 -80815736 + MLT1K LTR MaLR 188 302 -286 2517 44 0 0 chr17 4623005 4623303 -80815177 + AluY SINE Alu 5 302 -9 982 154 5 53 chr17 4623303 4623491 -80814989 + AluSg/x SINE Alu 132 310 0 839 183 0 0 chr17 4623505 4623647 -80814833 + FLAM_C SINE Alu 1 142 -1 670 91 0 0 chr17 4623670 4623758 -80814722 + AluS SINE Alu 1 88 -225 188 143 24 0 chr17 4624200 4624242 -80814238 + GA-rich Low_complexity Low_complexity 5 47 0 2248 106 3 0 chr17 4624398 4624709 -80813771 + AluSx SINE Alu 1 312 0 2347 88 3 0 chr17 4625037 4625343 -80813137 + AluSx SINE Alu 1 307 -5 1240 174 9 30 chr17 4625355 4625585 -80812895 - AluJo SINE Alu -46 266 42 2041 114 16 7 chr17 4625699 4626005 -80812475 - AluSc SINE Alu 0 309 1 1970 115 61 0 chr17 4626020 4626315 -80812165 - AluSp SINE Alu 0 313 1 671 148 16 41 chr17 4626355 4626477 -80812003 + FLAM_C SINE Alu 11 129 -14 2078 115 27 0 chr17 4626508 4626803 -80811677 + AluSx SINE Alu 1 303 -9 1610 179 18 4 chr17 4627360 4627670 -80810810 - AluJb SINE Alu 0 314 1 2072 117 3 0 chr17 4627682 4627997 -80810483 - AluSx SINE Alu 0 316 1 1818 145 0 26 chr17 4628000 4628310 -80810170 - AluSx SINE Alu -10 302 1 241 216 39 0 chr17 4628325 4628376 -80810104 - MER66B LTR ERV1 -143 343 291 2551 203 71 50 chr17 4628410 4628452 -80810028 + L1MC4 LINE L1 7181 7221 -821 2129 81 7 42 chr17 4628452 4628760 -80809720 + AluSq SINE Alu 1 297 -16 2551 203 71 50 chr17 4628760 4629560 -80808920 + L1MC4 LINE L1 7221 8041 -1 1573 180 13 28 chr17 4629632 4629949 -80808531 - AluJb SINE Alu 0 312 1 255 275 72 14 chr17 4629969 4630107 -80808373 + L1ME LINE L1 5727 5872 -298 1615 148 35 4 chr17 4630109 4630365 -80808115 + AluSx SINE Alu 1 264 -48 1345 161 17 25 chr17 4630810 4630879 -80807601 + AluJo SINE Alu 52 120 -196 2221 101 0 0 chr17 4630879 4631176 -80807304 - AluSq SINE Alu -16 297 1 1345 161 17 25 chr17 4631176 4631373 -80807107 + AluJo SINE Alu 120 316 0 632 330 87 78 chr17 4631488 4631560 -80806920 + L1MEc LINE L1 2242 2312 -3903 2069 113 3 0 chr17 4631560 4631843 -80806637 + AluSx SINE Alu 1 284 -28 933 67 8 0 chr17 4631723 4631843 -80806637 + AluSg/x SINE Alu 162 317 0 316 0 0 0 chr17 4631843 4631878 -80806602 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 632 330 87 78 chr17 4631878 4631942 -80806538 + L1MEc LINE L1 2312 2374 -3841 2127 85 41 10 chr17 4631942 4632236 -80806244 + AluSq SINE Alu 3 305 -8 632 330 87 78 chr17 4632236 4632404 -80806076 + L1MEc LINE L1 2374 2510 -3705 1396 224 94 34 chr17 4632404 4632875 -80805605 + MLT1D LTR MaLR 1 386 -4 536 343 29 0 chr17 4632880 4633055 -80805425 + L1MEc LINE L1 2504 2683 -3532 1605 173 61 0 chr17 4633133 4633411 -80805069 + AluJb SINE Alu 1 295 -17 933 129 58 7 chr17 4633448 4633603 -80804877 + AluJb SINE Alu 114 276 -36 1399 173 24 45 chr17 4633603 4633624 -80804856 - MLT2D LTR ERVL -25 389 369 183 100 0 0 chr17 4633624 4633654 -80804826 + (CA)n Simple_repeat Simple_repeat 2 31 0 1399 173 24 45 chr17 4633654 4633967 -80804513 - MLT2D LTR ERVL -45 369 62 1047 177 21 0 chr17 4633987 4634173 -80804307 - AluSg/x SINE Alu -1 311 122 455 142 19 47 chr17 4634173 4634279 -80804201 - L1MDa LINE L1 -6437 103 1 554 143 0 0 chr17 4634286 4634377 -80804103 - FLAM_C SINE Alu -2 141 51 421 93 0 53 chr17 4634439 4634514 -80803966 + MLT2C2 LTR ERVL 1 71 -393 1973 143 20 0 chr17 4634514 4634814 -80803666 + AluSx SINE Alu 1 306 -6 919 115 0 8 chr17 4634822 4634952 -80803528 + AluSq/x SINE Alu 1 129 -184 2291 97 7 0 chr17 4634953 4635263 -80803217 + AluSx SINE Alu 1 312 0 1172 150 0 0 chr17 4635320 4635500 -80802980 - AluSq SINE Alu 0 313 134 1457 159 29 84 chr17 4635500 4635657 -80802823 - AluJo SINE Alu -10 302 169 2500 52 0 13 chr17 4635657 4635964 -80802516 + AluY SINE Alu 1 303 -8 1457 159 29 84 chr17 4635964 4636115 -80802365 - AluJo SINE Alu -143 169 11 2007 184 8 31 chr17 4636140 4636265 -80802215 - L1PB4 LINE L1 0 6156 6030 2138 95 27 0 chr17 4636265 4636559 -80801921 - AluSx SINE Alu -10 302 1 2007 184 8 31 chr17 4636559 4636814 -80801666 - L1PB4 LINE L1 -126 6030 5785 2316 102 0 6 chr17 4636830 4637144 -80801336 - AluSx SINE Alu 0 312 1 858 171 0 38 chr17 4637155 4637313 -80801167 - FRAM SINE Alu -24 152 1 232 103 0 0 chr17 4637315 4637354 -80801126 - L1PB4 LINE L1 -522 5780 5742 2246 90 3 3 chr17 4637781 4638080 -80800400 - AluSc SINE Alu -9 300 2 2857 9 0 0 chr17 4638098 4638416 -80800064 - AluYb8 SINE Alu 0 318 1 1825 136 3 53 chr17 4638448 4638820 -80799660 + AluJb SINE Alu 5 360 0 2160 76 9 54 chr17 4638843 4639159 -80799321 + AluSx SINE Alu 1 302 -10 4818 96 0 85 chr17 4639475 4639920 -80798560 - LTR8 LTR ERV1 -1 690 334 2305 85 7 0 chr17 4639920 4640227 -80798253 - AluSx SINE Alu -1 311 3 4818 96 0 85 chr17 4640227 4640535 -80797945 - LTR8 LTR ERV1 -357 334 1 845 167 0 0 chr17 4640563 4640701 -80797779 - AluJb SINE Alu -6 306 169 1523 171 4 29 chr17 4640701 4640981 -80797499 + AluJb SINE Alu 40 312 0 2516 40 0 10 chr17 4641014 4641316 -80797164 - AluY SINE Alu -12 299 1 268 268 80 62 chr17 4641317 4641541 -80796939 + L1 LINE L1 3526 3753 -2393 1941 117 4 0 chr17 4641541 4641814 -80796666 + AluSp SINE Alu 1 274 -39 1185 124 119 0 chr17 4641815 4642017 -80796463 + AluSc SINE Alu 71 296 -13 968 278 27 113 chr17 4642340 4642607 -80795873 - L2 LINE L2 -196 3076 2788 1956 127 3 7 chr17 4642607 4642907 -80795573 - AluSq SINE Alu -14 299 1 968 278 27 113 chr17 4642907 4643062 -80795418 - L2 LINE L2 -484 2788 2621 1564 157 7 18 chr17 4643062 4643336 -80795144 + AluJo SINE Alu 1 271 -41 1629 103 0 4 chr17 4643338 4643570 -80794910 + AluSg/x SINE Alu 81 311 -1 968 278 27 113 chr17 4643570 4644075 -80794405 - L2 LINE L2 -652 2620 2152 1058 106 0 0 chr17 4644076 4644217 -80794263 + AluSq/x SINE Alu 2 142 -171 483 323 127 26 chr17 4644220 4644618 -80793862 - L2 LINE L2 -1160 2154 1709 2226 71 17 14 chr17 4644618 4644913 -80793567 - AluSp SINE Alu -17 296 1 483 323 127 26 chr17 4644913 4644941 -80793539 - L2 LINE L2 -1605 1709 1685 207 280 60 24 chr17 4646604 4646772 -80791708 + (CCCCAA)n Simple_repeat Simple_repeat 3 176 0 337 313 43 0 chr17 4647633 4647796 -80790684 + L1ME4a LINE L1 5950 6119 -2 2255 108 0 0 chr17 4647802 4648109 -80790371 + AluSx SINE Alu 1 307 -5 1720 163 3 3 chr17 4648114 4648403 -80790077 + AluJb SINE Alu 1 289 -23 248 286 0 16 chr17 4653943 4654006 -80784474 + CT-rich Low_complexity Low_complexity 4 65 0 400 263 76 35 chr17 4654233 4654404 -80784076 + MIR SINE MIR 68 245 -17 229 62 0 0 chr17 4654459 4654491 -80783989 + Alu SINE Alu 1 32 -268 1672 112 0 0 chr17 4654491 4654723 -80783757 + AluSg/x SINE Alu 74 305 -5 687 117 0 100 chr17 4656395 4656515 -80781965 + AluJb SINE Alu 1 108 -204 1524 187 11 0 chr17 4656520 4656798 -80781682 + AluJb SINE Alu 27 307 -5 193 303 131 7 chr17 4659171 4659316 -80779164 - MIR3 SINE MIR -21 187 25 22 56 0 0 chr17 4660757 4660793 -80777687 + GC_rich Low_complexity Low_complexity 1 36 0 23 78 0 0 chr17 4661743 4661794 -80776686 + GC_rich Low_complexity Low_complexity 1 51 0 258 238 33 25 chr17 4662769 4662891 -80775589 + G-rich Low_complexity Low_complexity 2 124 0 1989 104 7 31 chr17 4664953 4665125 -80773355 - AluSx SINE Alu 0 305 142 2276 32 72 0 chr17 4665125 4665404 -80773076 - AluY SINE Alu -12 299 1 1989 104 7 31 chr17 4665404 4665543 -80772937 - AluSx SINE Alu -163 142 1 230 250 107 0 chr17 4666252 4666336 -80772144 - L2 LINE L2 -5 3267 3175 1055 194 38 13 chr17 4667070 4667307 -80771173 + MIR SINE MIR 19 261 -1 476 219 64 97 chr17 4667301 4667414 -80771066 - MIR SINE MIR -27 235 130 * 2153 79 59 0 chr17 4667414 4667704 -80770776 + AluSg SINE Alu 1 307 -3 476 219 64 97 chr17 4667704 4667807 -80770673 - MIR SINE MIR -132 130 25 591 64 86 0 chr17 4668567 4668707 -80769773 + (TCTCTG)n Simple_repeat Simple_repeat 1 152 0 1122 148 0 0 chr17 4670161 4670337 -80768143 + FRAM SINE Alu 1 175 -1 2498 58 3 3 chr17 4670565 4670874 -80767606 + AluSp SINE Alu 1 309 -4 738 310 15 5 chr17 4670889 4671089 -80767391 - MIR SINE MIR -42 220 19 1593 150 27 60 chr17 4671093 4671393 -80767087 - AluJo SINE Alu -22 290 1 817 165 15 0 chr17 4671393 4671526 -80766954 - AluJo SINE Alu -177 135 1 2194 111 0 3 chr17 4671567 4671873 -80766607 + AluSx SINE Alu 1 305 -7 274 323 54 31 chr17 4673755 4673794 -80764686 - L2 LINE L2 -3 3269 3232 1759 118 56 59 chr17 4673794 4673957 -80764523 - MER44D DNA MER2_type -1883 608 446 2304 84 7 0 chr17 4673957 4674254 -80764226 + AluSq SINE Alu 1 299 -14 2335 76 0 32 chr17 4674255 4674570 -80763910 + AluY SINE Alu 1 305 -6 1759 118 56 59 chr17 4674570 4674743 -80763737 - MER44D DNA MER2_type -2044 447 1 274 323 54 31 chr17 4674743 4674833 -80763647 - L2 LINE L2 -40 3232 3137 2223 103 0 3 chr17 4674896 4675196 -80763284 - AluSx SINE Alu -13 299 1 1139 164 5 55 chr17 4675198 4675417 -80763063 - AluJb SINE Alu -21 291 84 338 102 17 0 chr17 4675425 4675484 -80762996 - AluSg SINE Alu 0 301 242 1032 85 0 0 chr17 4675487 4675616 -80762864 - AluSg SINE Alu -168 142 14 798 229 40 63 chr17 4675623 4675846 -80762634 - AluJo SINE Alu -92 220 3 1367 165 189 0 chr17 4675892 4676146 -80762334 + AluJo SINE Alu 1 302 0 187 286 0 0 chr17 4676166 4676215 -80762265 - L2 LINE L2 -75 3238 3190 2446 79 0 0 chr17 4676233 4676538 -80761942 - AluSg SINE Alu -5 305 1 460 188 47 0 chr17 4676784 4676869 -80761611 + AluJ/FLAM SINE Alu 3 91 -221 2535 52 0 0 chr17 4677137 4677442 -80761038 - AluY SINE Alu -6 305 1 2053 94 3 14 chr17 4677520 4677684 -80760796 - AluSx SINE Alu -14 298 137 2322 87 0 10 chr17 4677684 4677994 -80760486 - AluSp SINE Alu -6 307 1 2053 94 3 14 chr17 4677994 4678117 -80760363 - AluSx SINE Alu -175 137 14 215 214 36 0 chr17 4678138 4678194 -80760286 + L2 LINE L2 2926 2983 -289 290 276 69 26 chr17 4678296 4678412 -80760068 + L2 LINE L2 3168 3288 -25 1667 155 10 39 chr17 4678441 4678608 -80759872 - AluJb SINE Alu -12 300 130 384 22 0 0 chr17 4678608 4678653 -80759827 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2174 64 0 0 chr17 4678653 4678919 -80759561 - AluSc SINE Alu -30 279 14 1667 155 10 39 chr17 4678919 4679059 -80759421 - AluJb SINE Alu -180 132 1 333 269 48 58 chr17 4679112 4679216 -80759264 + MIR SINE MIR 4 106 -156 1520 171 45 21 chr17 4684140 4684426 -80754054 - AluJo SINE Alu -19 293 1 1990 148 7 0 chr17 4684466 4684770 -80753710 - AluSx SINE Alu -6 306 1 302 383 82 27 chr17 4687999 4688255 -80750225 + L1M4c LINE L1 935 1204 -5180 266 243 66 44 chr17 4688735 4688788 -80749692 + L1ME4a LINE L1 5983 6033 -88 2349 90 0 0 chr17 4688788 4689087 -80749393 - AluSx SINE Alu -13 299 1 266 243 66 44 chr17 4689087 4689169 -80749311 + L1ME4a LINE L1 6033 6121 0 2128 122 0 6 chr17 4689198 4689510 -80748970 + AluSx SINE Alu 1 310 -2 1101 178 66 5 chr17 4690652 4690849 -80747631 + MER3 DNA MER1_type 1 209 0 384 347 18 24 chr17 4690955 4691125 -80747355 - MIR3 SINE MIR -23 185 17 334 299 0 11 chr17 4691464 4691551 -80746929 - L2 LINE L2 0 3272 3187 539 327 125 11 chr17 4691576 4691857 -80746623 - L3 LINE CR1 -74 1503 1191 2448 68 10 0 chr17 4692010 4692319 -80746161 + AluSq SINE Alu 1 312 -1 216 163 0 0 chr17 4692685 4692728 -80745752 + G-rich Low_complexity Low_complexity 5 47 0 2319 71 3 10 chr17 4696067 4696364 -80742116 - AluSq SINE Alu -16 297 3 2153 124 0 0 chr17 4696366 4696665 -80741815 - AluSx SINE Alu -13 299 1 2283 68 0 0 chr17 4696724 4697030 -80741450 - AluY SINE Alu 0 307 2 2245 87 7 0 chr17 4697520 4697818 -80740662 + AluSg SINE Alu 1 300 -10 1250 88 0 0 chr17 4697818 4697977 -80740503 + AluSp SINE Alu 134 292 -21 428 360 7 7 chr17 4697980 4698133 -80740347 + MIR SINE MIR 89 241 -21 2291 100 0 0 chr17 4698204 4698505 -80739975 - AluSx SINE Alu -11 301 1 957 90 298 6 chr17 4703297 4703381 -80735099 + MER30 DNA MER1_type 1 59 -171 2288 76 0 16 chr17 4703381 4703685 -80734795 + AluSq SINE Alu 1 299 -14 2281 89 10 0 chr17 4703695 4703999 -80734481 - AluSq SINE Alu -6 307 1 957 90 298 6 chr17 4703999 4704081 -80734399 + MER30 DNA MER1_type 65 230 0 905 284 251 15 chr17 4704289 4704807 -80733673 + L2 LINE L2 2057 2696 -618 467 240 34 17 chr17 4704812 4704991 -80733489 + L1MC5 LINE L1 7744 7925 -36 2049 123 10 7 chr17 4705063 4705365 -80733115 - AluJo SINE Alu -9 303 1 288 77 0 0 chr17 4705398 4705437 -80733043 + (TCCCC)n Simple_repeat Simple_repeat 4 42 0 191 105 53 0 chr17 4705444 4705482 -80732998 + CT-rich Low_complexity Low_complexity 1 40 0 874 220 0 0 chr17 4705496 4705655 -80732825 - FRAM SINE Alu -17 159 1 2231 107 0 0 chr17 4705661 4705961 -80732519 - AluSq SINE Alu -13 300 1 2247 94 7 0 chr17 4705961 4706259 -80732221 - AluSp SINE Alu -13 300 1 2296 65 3 3 chr17 4706259 4706549 -80731931 - AluY SINE Alu -21 290 1 2389 89 0 0 chr17 4706549 4706853 -80731627 - AluSx SINE Alu -8 304 1 605 271 90 0 chr17 4706855 4707043 -80731437 + L2 LINE L2 3109 3313 0 2390 89 0 0 chr17 4707291 4707595 -80730885 + AluSg SINE Alu 1 304 -6 2135 105 7 0 chr17 4707705 4707999 -80730481 + AluSx SINE Alu 1 296 -16 831 152 0 23 chr17 4708294 4708426 -80730054 + AluJo/FLAM SINE Alu 1 129 -173 2402 86 0 3 chr17 4708429 4708742 -80729738 + AluSp SINE Alu 1 312 -1 1672 151 37 27 chr17 4708884 4709182 -80729298 + AluJb SINE Alu 1 301 -11 2211 75 51 0 chr17 4709182 4709476 -80729004 + AluSx SINE Alu 1 310 -2 227 283 7 36 chr17 4710650 4710788 -80727692 + C-rich Low_complexity Low_complexity 1 134 0 26 50 0 0 chr17 4710798 4710838 -80727642 + GC_rich Low_complexity Low_complexity 1 40 0 223 333 11 11 chr17 4714369 4714459 -80724021 + MIR3 SINE MIR 3 92 -116 488 298 136 5 chr17 4714574 4714772 -80723708 + MIR SINE MIR 4 227 -35 426 296 84 28 chr17 4714963 4715142 -80723338 + MIR SINE MIR 33 221 -41 2223 98 0 31 chr17 4715810 4716128 -80722352 - AluSx SINE Alu -4 308 1 528 325 211 12 chr17 4717903 4718509 -80719971 + L3 LINE CR1 652 1378 -199 1478 92 0 0 chr17 4718509 4718704 -80719776 - AluSc SINE Alu -12 297 103 2193 96 3 0 chr17 4718706 4718997 -80719483 + AluSx SINE Alu 1 292 -20 700 156 18 0 chr17 4719007 4719116 -80719364 - AluSq/x SINE Alu -201 111 1 2211 89 10 0 chr17 4719126 4719417 -80719063 - AluSx SINE Alu -18 294 1 467 333 41 31 chr17 4719423 4719618 -80718862 + L3 LINE CR1 1374 1570 -7 194 347 0 0 chr17 4720791 4720866 -80717614 - L2 LINE L2 -227 3045 2971 203 254 15 60 chr17 4720917 4720984 -80717496 + L2 LINE L2 3249 3312 -1 2009 129 3 3 chr17 4721965 4722259 -80716221 - AluSg SINE Alu -16 294 1 2302 86 3 0 chr17 4722288 4722589 -80715891 + AluY SINE Alu 1 302 -9 1995 134 3 3 chr17 4722708 4723007 -80715473 - AluSx SINE Alu -13 299 1 601 257 87 52 chr17 4723022 4723248 -80715232 - L1MC4a LINE L1 -302 5819 5597 2461 38 3 0 chr17 4723248 4723539 -80714941 + AluY SINE Alu 1 292 -19 601 257 87 52 chr17 4723539 4723584 -80714896 - L1MC4a LINE L1 -524 5597 5555 1328 81 0 0 chr17 4723594 4723766 -80714714 - AluY SINE Alu -14 297 126 483 277 43 5 chr17 4723771 4723959 -80714521 - L1MC4a LINE L1 -2252 5556 5362 654 246 129 26 chr17 4727282 4727514 -80710966 + MIR SINE MIR 4 259 -3 2326 83 3 6 chr17 4728051 4728365 -80710115 - AluSp SINE Alu 0 313 1 2257 93 7 13 chr17 4728365 4728674 -80709806 - AluSx SINE Alu -1 311 4 1957 94 80 0 chr17 4728922 4729197 -80709283 - AluSx SINE Alu -15 297 1 1118 74 0 0 chr17 4729197 4729332 -80709148 - AluSg SINE Alu -175 135 1 2163 105 7 7 chr17 4729408 4729704 -80708776 + AluSx SINE Alu 6 301 -11 2470 45 3 16 chr17 4730072 4730384 -80708096 - AluY SINE Alu -3 308 1 398 277 53 71 chr17 4730472 4730654 -80707826 - MIR SINE MIR -30 178 1 2080 154 0 0 chr17 4730750 4731062 -80707418 - AluJb SINE Alu 0 312 1 393 302 18 62 chr17 4731124 4731166 -80707314 + L2 LINE L2 3099 3141 -172 2041 76 6 111 chr17 4731166 4731509 -80706971 + AluSp SINE Alu 1 307 -6 393 302 18 62 chr17 4731509 4731691 -80706789 + L2 LINE L2 3141 3313 0 222 309 52 41 chr17 4732174 4732271 -80706209 + L2 LINE L2 3161 3258 -14 235 282 28 0 chr17 4733867 4733938 -80704542 + MER113 DNA MER1_type? 7 79 -442 2249 85 10 10 chr17 4733951 4734257 -80704223 - AluSx SINE Alu -6 306 1 1723 159 3 10 chr17 4734263 4734558 -80703922 - AluJo SINE Alu -14 298 6 260 321 291 0 chr17 4734604 4734769 -80703711 - MIR SINE MIR -4 258 46 492 288 82 6 chr17 4735629 4735799 -80702681 + MER5A DNA MER1_type 7 189 0 2183 80 3 23 chr17 4735814 4736114 -80702366 - AluSc SINE Alu -15 294 1 310 302 19 44 chr17 4737528 4737687 -80700793 - L1ME3 LINE L1 -2 6160 6006 1394 114 144 23 chr17 4737718 4737981 -80700499 - AluSx SINE Alu -17 295 1 2146 73 7 23 chr17 4738343 4738645 -80699835 + AluY SINE Alu 1 297 -14 301 333 66 44 chr17 4739337 4739550 -80698930 + L1M4 LINE L1 3073 3293 -2853 1486 159 97 21 chr17 4739550 4739840 -80698640 + AluJo SINE Alu 1 312 0 301 333 66 44 chr17 4739840 4739854 -80698626 + L1M4 LINE L1 3293 3305 -2841 1000 77 14 43 chr17 4739883 4740092 -80698388 - AluSc SINE Alu -15 294 1 560 187 93 0 chr17 4740131 4740238 -80698242 + MLT1B LTR MaLR 1 117 -273 1673 88 0 4 chr17 4740239 4740467 -80698013 + AluSp SINE Alu 87 313 0 1617 194 0 3 chr17 4741223 4741516 -80696964 + AluJo SINE Alu 11 302 -10 1849 137 6 16 chr17 4741762 4742077 -80696403 + AluSx SINE Alu 1 312 0 652 144 0 45 chr17 4742157 4742268 -80696212 + AluSq/x SINE Alu 2 107 -205 2161 82 0 23 chr17 4742838 4743142 -80695338 + AluY SINE Alu 1 297 -14 1609 154 34 17 chr17 4743779 4744077 -80694403 + AluJb SINE Alu 1 303 -9 765 155 14 63 chr17 4744123 4744265 -80694215 + AluJo SINE Alu 2 136 -176 366 246 45 128 chr17 4744347 4744434 -80694046 - MIR SINE MIR -52 210 117 1989 107 0 17 chr17 4744434 4744753 -80693727 - AluSx SINE Alu 0 314 1 680 195 31 8 chr17 4744755 4744883 -80693597 - FLAM_A SINE Alu -2 131 1 366 246 45 128 chr17 4744883 4744970 -80693510 - MIR SINE MIR -146 116 47 1371 157 101 18 chr17 4745026 4745312 -80693168 + AluJo SINE Alu 1 310 -2 2047 112 0 16 chr17 4745823 4746128 -80692352 - AluSq SINE Alu -13 300 1 1697 178 3 13 chr17 4746134 4746437 -80692043 - AluJb SINE Alu 0 312 13 2114 92 0 7 chr17 4746450 4746770 -80691710 - AluSc SINE Alu 0 318 1 2184 82 23 7 chr17 4747343 4747649 -80690831 + AluSx SINE Alu 1 311 -1 1547 189 23 7 chr17 4747846 4748031 -80690449 - AluJo SINE Alu 0 312 119 189 0 0 0 chr17 4748031 4748052 -80690428 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1547 189 23 7 chr17 4748052 4748173 -80690307 - AluJo SINE Alu -193 119 1 472 233 178 25 chr17 4748267 4748430 -80690050 + MIR SINE MIR 31 218 -44 2064 90 0 10 chr17 4748531 4748810 -80689670 + AluSg SINE Alu 4 281 -29 201 74 0 0 chr17 4748810 4748837 -80689643 + (CAAG)n Simple_repeat Simple_repeat 1 27 0 274 213 52 29 chr17 4749034 4749170 -80689310 + (CGGGG)n Simple_repeat Simple_repeat 5 143 0 2120 57 4 18 chr17 4749530 4749809 -80688671 + AluSg SINE Alu 3 277 -33 1897 111 0 14 chr17 4752398 4752715 -80685765 + AluSx SINE Alu 1 313 0 1181 198 16 108 chr17 4753087 4753401 -80685079 - AluJb SINE Alu -16 286 2 1950 89 58 14 chr17 4753428 4753721 -80684759 - AluSq SINE Alu -7 306 1 2396 71 0 3 chr17 4753794 4754103 -80684377 - AluSx SINE Alu -4 308 1 257 264 0 0 chr17 4754155 4754208 -80684272 + MER58B DNA MER1_type 35 87 -254 831 199 55 0 chr17 4754209 4754390 -80684090 - AluJo SINE Alu -1 311 121 800 175 13 7 chr17 4754416 4754570 -80683910 + AluJb SINE Alu 158 312 0 1144 157 0 68 chr17 4754572 4754633 -80683847 + MER58B DNA MER1_type 115 179 -2241 2050 103 3 26 chr17 4754633 4754935 -80683545 + AluSx SINE Alu 1 295 -17 1144 157 0 68 chr17 4754935 4755109 -80683371 + MER58B DNA MER1_type 179 334 -7 330 301 89 8 chr17 4755112 4755235 -80683245 + L2 LINE L2 3180 3312 -1 2401 58 0 10 chr17 4755308 4755618 -80682862 - AluY SINE Alu -4 307 1 750 244 0 12 chr17 4755644 4755808 -80682672 + FRAM SINE Alu 1 162 -14 246 308 33 33 chr17 4755808 4755899 -80682581 - MIR SINE MIR -155 107 17 2028 92 4 0 chr17 4755969 4756241 -80682239 - AluSx SINE Alu -39 273 1 1796 171 0 3 chr17 4756639 4756937 -80681543 - AluJo SINE Alu -6 306 10 2410 57 0 3 chr17 4757274 4757570 -80680910 - AluY SINE Alu -16 295 1 1607 172 31 21 chr17 4757572 4757734 -80680746 - AluJo SINE Alu -9 293 134 1771 130 3 60 chr17 4757734 4757928 -80680552 - AluSx SINE Alu 0 312 108 248 71 48 0 chr17 4757928 4757970 -80680510 + T-rich Low_complexity Low_complexity 2 45 0 1989 92 0 21 chr17 4757970 4758252 -80680228 - AluSq SINE Alu -27 286 11 1771 130 3 60 chr17 4758252 4758397 -80680083 - AluSx SINE Alu -202 110 3 1607 172 31 21 chr17 4758397 4758524 -80679956 - AluJo SINE Alu -168 134 1 1762 95 57 44 chr17 4759032 4759328 -80679152 - AluSp SINE Alu -12 301 2 2263 102 0 3 chr17 4759664 4759968 -80678512 - AluSx SINE Alu -9 303 1 197 330 108 35 chr17 4760096 4760354 -80678126 + L2 LINE L2 2836 3112 -160 2283 93 3 3 chr17 4760361 4760674 -80677806 - AluSp SINE Alu 0 313 1 1628 171 10 33 chr17 4760677 4760976 -80677504 - AluJo SINE Alu -16 296 5 211 243 146 68 chr17 4761227 4761330 -80677150 - MIR SINE MIR -125 137 27 242 314 49 10 chr17 4761449 4761551 -80676929 + MIR3 SINE MIR 3 108 -100 2038 115 3 16 chr17 4761785 4762089 -80676391 + AluSx SINE Alu 5 304 -8 2092 94 3 19 chr17 4762271 4762580 -80675900 - AluSx SINE Alu -8 304 1 518 278 124 0 chr17 4762655 4762824 -80675656 + MIR SINE MIR 71 260 -2 2032 110 0 0 chr17 4762856 4763137 -80675343 + AluSg SINE Alu 11 291 -19 2170 64 0 7 chr17 4763342 4763623 -80674857 + AluY SINE Alu 1 279 -32 219 24 49 24 chr17 4763623 4763664 -80674816 + (TAAAA)n Simple_repeat Simple_repeat 1 42 0 1907 139 10 0 chr17 4763673 4763961 -80674519 - AluJo SINE Alu -21 291 1 288 0 0 0 chr17 4763987 4764019 -80674461 + (TG)n Simple_repeat Simple_repeat 2 33 0 2160 108 0 9 chr17 4764521 4764836 -80673644 - AluSq SINE Alu -1 312 1 2164 77 0 11 chr17 4764884 4765207 -80673273 - AluSq SINE Alu 0 320 1 1340 147 23 27 chr17 4765371 4765500 -80672980 + AluJb SINE Alu 3 131 -181 2162 104 0 3 chr17 4765500 4765799 -80672681 + AluSc SINE Alu 2 299 -10 1340 147 23 27 chr17 4765799 4765927 -80672553 + AluJb SINE Alu 131 259 -53 525 152 101 0 chr17 4765927 4766026 -80672454 + FRAM SINE Alu 67 175 -1 1866 98 47 20 chr17 4766586 4766882 -80671598 + AluSq SINE Alu 9 312 -1 320 260 0 40 chr17 4767145 4767245 -80671235 + L1MB5 LINE L1 5865 5960 -214 2136 120 3 3 chr17 4767325 4767634 -80670846 + AluSp SINE Alu 3 311 -2 354 229 8 29 chr17 4767688 4767832 -80670648 + L1MC/D LINE L1 5314 5455 -701 1761 173 7 0 chr17 4767853 4768148 -80670332 + AluJb SINE Alu 1 297 -15 285 354 18 6 chr17 4768304 4768468 -80670012 - L1ME LINE L1 -439 5682 5517 2301 93 0 0 chr17 4768508 4768819 -80669661 + AluSq SINE Alu 1 311 -2 1927 92 51 3 chr17 4768994 4769287 -80669193 - AluSq SINE Alu -6 307 1 1043 144 5 60 chr17 4769291 4769506 -80668974 - LTR62 LTR ERVK -516 203 1 2324 88 0 3 chr17 4769814 4770121 -80668359 + AluSx SINE Alu 1 306 -6 584 208 219 6 chr17 4770152 4770330 -80668150 - MLT1D LTR MaLR 0 505 290 787 274 89 38 chr17 4770598 4770967 -80667513 - MLT1H1 LTR MaLR 0 555 168 1511 84 5 0 chr17 4770970 4771173 -80667307 - AluSg1 SINE Alu -16 294 91 817 205 37 23 chr17 4771173 4771388 -80667092 - LTR7 LTR ERV1 0 450 233 715 86 0 0 chr17 4772423 4772516 -80665964 - AluSg1 SINE Alu -215 94 2 467 238 61 37 chr17 4772519 4772683 -80665797 - MLT1H1 LTR MaLR -413 177 10 1808 148 7 3 chr17 4772749 4773056 -80665424 + AluJo SINE Alu 1 308 0 1134 221 92 7 chr17 4773231 4773512 -80664968 - MLT1D LTR MaLR -160 345 41 1963 121 3 19 chr17 4773840 4774154 -80664326 + AluSp SINE Alu 2 310 -3 199 281 18 0 chr17 4774888 4774945 -80663535 + L2 LINE L2 2983 3040 -273 303 280 131 0 chr17 4775231 4775338 -80663142 - MIR3 SINE MIR -52 156 36 2142 98 0 10 chr17 4775556 4775861 -80662619 - AluSx SINE Alu -10 302 1 370 236 63 0 chr17 4776966 4777105 -80661375 + MIR SINE MIR 45 191 -70 2266 57 0 3 chr17 4777246 4777529 -80660951 - AluSq SINE Alu -7 306 25 2071 99 0 7 chr17 4777874 4778177 -80660303 + AluSc SINE Alu 1 301 0 1958 126 3 10 chr17 4778545 4778846 -80659634 + AluSx SINE Alu 6 304 -8 303 250 70 0 chr17 4779117 4779217 -80659263 + (CACTG)n Simple_repeat Simple_repeat 4 110 0 1990 212 42 67 chr17 4779453 4779501 -80658979 - LTR31 LTR ERV1 -17 602 554 2156 55 0 35 chr17 4779501 4779812 -80658668 - AluY SINE Alu -11 300 1 1990 212 42 67 chr17 4779812 4780203 -80658277 - LTR31 LTR ERV1 -65 554 155 2194 104 10 10 chr17 4780203 4780512 -80657968 - AluSq SINE Alu -4 309 1 1990 212 42 67 chr17 4780512 4780636 -80657844 - LTR31 LTR ERV1 -464 155 52 1607 164 38 11 chr17 4780636 4780797 -80657683 - AluJo SINE Alu -15 297 123 270 0 0 0 chr17 4780797 4780827 -80657653 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1607 164 38 11 chr17 4780827 4780952 -80657528 - AluJo SINE Alu -189 123 3 1990 212 42 67 chr17 4780952 4781003 -80657477 - LTR31 LTR ERV1 -567 52 1 627 163 10 0 chr17 4781472 4781570 -80656910 + AluJ/FLAM SINE Alu 2 100 -212 674 173 17 12 chr17 4781609 4781782 -80656698 + GA-rich Low_complexity Low_complexity 5 178 0 2188 113 0 6 chr17 4781904 4782215 -80656265 + AluSx SINE Alu 2 310 -2 396 295 18 9 chr17 4782764 4782876 -80655604 - L2 LINE L2 -42 3271 3159 1719 175 0 7 chr17 4782945 4783242 -80655238 - AluJo SINE Alu -13 299 5 1023 177 0 0 chr17 4783248 4783406 -80655074 - AluJb SINE Alu -15 297 140 2312 86 3 16 chr17 4783409 4783713 -80654767 - AluSg SINE Alu -6 304 5 736 123 9 0 chr17 4784098 4784204 -80654276 + AluSq/x SINE Alu 5 111 -201 885 176 66 44 chr17 4784223 4784285 -80654195 - AluJo SINE Alu -126 186 127 509 0 16 0 chr17 4784285 4784346 -80654134 + (TG)n Simple_repeat Simple_repeat 2 63 0 885 176 66 44 chr17 4784346 4784465 -80654015 - AluJo SINE Alu -185 127 1 756 161 0 0 chr17 4784465 4784583 -80653897 - AluSg/x SINE Alu -16 296 179 248 143 0 0 chr17 4784683 4784725 -80653755 + Alu SINE Alu 254 295 -4 1324 80 0 6 chr17 4784864 4785027 -80653453 - AluSp SINE Alu -151 162 1 264 30 0 0 chr17 4785095 4785128 -80653352 + (T)n Simple_repeat Simple_repeat 1 33 0 617 266 78 56 chr17 4785188 4785400 -80653080 + L2 LINE L2 2913 3138 -175 1942 138 51 0 chr17 4785400 4785696 -80652784 - AluSx SINE Alu -1 311 1 617 266 78 56 chr17 4785696 4785840 -80652640 + L2 LINE L2 3138 3277 -36 2130 113 19 13 chr17 4786002 4786311 -80652169 + AluSx SINE Alu 1 311 -1 2360 70 3 3 chr17 4786584 4786892 -80651588 + AluSp SINE Alu 2 309 0 324 295 11 0 chr17 4787175 4787270 -80651210 - MIR3 SINE MIR -2 206 111 1674 167 7 7 chr17 4787318 4787421 -80651059 + AluJb SINE Alu 31 133 -179 2351 105 0 0 chr17 4787421 4787715 -80650765 + AluSq SINE Alu 1 294 -19 1674 167 7 7 chr17 4787715 4787893 -80650587 + AluJb SINE Alu 132 312 0 2256 96 7 0 chr17 4788438 4788729 -80649751 + AluSc SINE Alu 5 297 -12 591 98 0 12 chr17 4788866 4788948 -80649532 - AluJb SINE Alu -148 164 84 1769 132 38 0 chr17 4788995 4789260 -80649220 + AluSx SINE Alu 18 292 -20 26 50 0 0 chr17 4789261 4789301 -80649179 + AT_rich Low_complexity Low_complexity 1 40 0 2253 96 20 0 chr17 4789354 4789646 -80648834 + AluSp SINE Alu 1 298 -15 2279 96 3 7 chr17 4789648 4789950 -80648530 + AluY SINE Alu 1 301 -10 303 275 101 36 chr17 4790055 4790193 -80648287 - L1MC/D LINE L1 -2183 5625 5479 2221 75 6 53 chr17 4790202 4790521 -80647959 + AluSg SINE Alu 2 305 -5 714 189 13 19 chr17 4790660 4790819 -80647661 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 4790870 4790905 -80647575 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 4790920 4791041 -80647439 + CT-rich Low_complexity Low_complexity 1 123 0 582 180 0 27 chr17 4791041 4791152 -80647328 - AluJb SINE Alu -3 309 202 1447 177 0 4 chr17 4791154 4791386 -80647094 - AluJo SINE Alu -73 239 9 327 207 129 43 chr17 4791409 4791525 -80646955 - MLT1B LTR MaLR -263 127 2 1976 117 3 23 chr17 4791592 4791892 -80646588 - AluSg SINE Alu -15 295 2 991 117 0 0 chr17 4791983 4792111 -80646369 - AluJb SINE Alu -23 289 162 711 261 92 38 chr17 4792482 4792850 -80645630 - MLT1H1 LTR MaLR 0 555 168 1541 88 5 5 chr17 4792853 4793057 -80645423 - AluSg/x SINE Alu -16 296 93 698 209 32 41 chr17 4793057 4793277 -80645203 - LTR7 LTR ERV1 0 450 233 2302 109 3 0 chr17 4795466 4795777 -80642703 + AluSq SINE Alu 1 312 -1 378 0 0 0 chr17 4796277 4796319 -80642161 + (CA)n Simple_repeat Simple_repeat 2 43 0 1805 129 29 0 chr17 4796345 4796623 -80641857 + AluJo SINE Alu 1 286 -26 246 192 27 41 chr17 4796801 4796874 -80641606 + C-rich Low_complexity Low_complexity 1 72 0 28 0 0 0 chr17 4796968 4796996 -80641484 + GC_rich Low_complexity Low_complexity 1 28 0 5684 52 8 0 chr17 4797568 4798226 -80640254 + LTR5 LTR ERVK 1 663 -306 207 303 37 46 chr17 4798572 4798681 -80639799 - L2 LINE L2 -223 3049 2942 201 343 27 0 chr17 4798688 4798761 -80639719 + L2 LINE L2 2884 2958 -356 2390 81 3 3 chr17 4798779 4799087 -80639393 - AluSp SINE Alu -5 308 1 2210 82 13 16 chr17 4799093 4799396 -80639084 - AluSq SINE Alu -11 302 1 996 181 12 0 chr17 4800010 4800176 -80638304 + AluSg/x SINE Alu 138 305 -7 2029 121 3 36 chr17 4800329 4800662 -80637818 - AluSq SINE Alu 0 313 1 23 0 0 0 chr17 4800708 4800731 -80637749 + AT_rich Low_complexity Low_complexity 1 23 0 624 196 38 23 chr17 4800731 4800864 -80637616 - AluJb SINE Alu -176 136 2 907 126 0 0 chr17 4801335 4801454 -80637026 + AluSg/x SINE Alu 169 287 -23 2444 101 0 0 chr17 4801454 4801762 -80636718 + AluSx SINE Alu 1 308 -4 1901 116 0 56 chr17 4801951 4802235 -80636245 - AluSq SINE Alu -16 297 30 2087 127 20 0 chr17 4802371 4802663 -80635817 + AluSx SINE Alu 1 298 -14 2268 62 4 7 chr17 4802963 4803237 -80635243 + AluSp SINE Alu 32 304 -9 207 204 0 0 chr17 4803576 4803625 -80634855 + T-rich Low_complexity Low_complexity 3 51 0 4500 36 0 12 chr17 4803625 4804127 -80634353 - SVA Other Other 0 1386 891 2140 107 24 0 chr17 4804427 4804717 -80633763 - AluSx SINE Alu -15 297 1 303 252 47 65 chr17 4804843 4804950 -80633530 + L1MDa LINE L1 1984 2088 -4452 265 208 56 14 chr17 4805591 4805663 -80632817 - MIR SINE MIR -75 187 113 2334 79 0 0 chr17 4807257 4807537 -80630943 - AluSq SINE Alu -16 297 18 2396 83 0 13 chr17 4807708 4808022 -80630458 - AluSg SINE Alu 0 310 1 2640 67 0 0 chr17 4808027 4808339 -80630141 - AluSx SINE Alu 0 312 1 213 204 23 11 chr17 4808889 4808977 -80629503 + CT-rich Low_complexity Low_complexity 1 89 0 2308 107 3 3 chr17 4809296 4809605 -80628875 + AluSx SINE Alu 1 309 -3 426 282 141 33 chr17 4809634 4809847 -80628633 + MIR SINE MIR 21 256 -6 2139 105 3 3 chr17 4810013 4810308 -80628172 + AluSx SINE Alu 1 295 -17 2204 117 0 7 chr17 4810308 4810608 -80627872 + AluSg SINE Alu 1 298 -12 1406 150 0 0 chr17 4811381 4811588 -80626892 - AluSq SINE Alu -7 306 100 2247 81 0 7 chr17 4811590 4811875 -80626605 - AluY SINE Alu -28 283 1 2070 111 3 20 chr17 4812081 4812379 -80626101 - AluSx SINE Alu -19 293 1 253 314 49 10 chr17 4812610 4812712 -80625768 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 4812831 4812934 -80625546 + MIR SINE MIR 27 138 -70 1747 166 10 30 chr17 4813181 4813483 -80624997 + AluJo SINE Alu 1 296 -16 2400 96 3 3 chr17 4813486 4813799 -80624681 + AluSp SINE Alu 1 313 0 202 313 113 45 chr17 4813806 4814071 -80624409 - L2 LINE L2 -160 3112 2830 2427 100 0 0 chr17 4814192 4814493 -80623987 + AluSx SINE Alu 1 301 -11 229 245 20 0 chr17 4814495 4814544 -80623936 + MIR3 SINE MIR 136 185 -23 1963 92 58 48 chr17 4814824 4815119 -80623361 + AluSp SINE Alu 2 299 -14 1337 114 11 0 chr17 4815221 4815396 -80623084 - AluSg SINE Alu -133 177 1 2084 122 30 7 chr17 4815459 4815754 -80622726 + AluSx SINE Alu 11 312 0 2183 105 7 13 chr17 4815756 4816061 -80622419 + AluSg SINE Alu 1 303 -7 277 330 0 0 chr17 4816068 4816159 -80622321 + L1ME LINE L1 5560 5650 -520 1849 173 77 0 chr17 4816165 4816478 -80622002 - MER1B DNA MER1_type 0 337 1 1703 168 10 20 chr17 4816544 4816847 -80621633 + AluJo SINE Alu 1 300 -12 1248 141 20 43 chr17 4816847 4817102 -80621378 - Charlie1b DNA MER1_type -216 307 59 321 300 36 18 chr17 4817219 4817329 -80621151 + L2 LINE L2 3152 3263 -9 2370 99 0 13 chr17 4817553 4817866 -80620614 + AluSp SINE Alu 1 309 -4 2175 124 0 0 chr17 4817938 4818236 -80620244 + AluSx SINE Alu 3 300 -12 2244 116 3 3 chr17 4818237 4818547 -80619933 + AluSp SINE Alu 1 310 -3 3140 179 92 28 chr17 4818553 4819234 -80619246 + MER21B LTR ERV1 94 818 -45 2321 86 0 0 chr17 4819255 4819565 -80618915 + AluSc SINE Alu 1 310 0 1492 193 4 22 chr17 4819572 4819847 -80618633 + AluJo SINE Alu 1 270 -42 252 0 0 0 chr17 4819866 4819894 -80618586 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1304 161 81 22 chr17 4819923 4820196 -80618284 + AluJo SINE Alu 13 301 -11 27 49 0 0 chr17 4820267 4820308 -80618172 + AT_rich Low_complexity Low_complexity 1 41 0 300 246 158 35 chr17 4820516 4820630 -80617850 - L2 LINE L2 0 3313 3186 1193 148 6 0 chr17 4820719 4820895 -80617585 - AluSg/x SINE Alu -2 310 134 1932 129 3 45 chr17 4820895 4821205 -80617275 - AluSx SINE Alu -15 297 1 1825 73 0 0 chr17 4821241 4821475 -80617005 - L1PA6 LINE L1 -2 6152 5919 2131 109 3 10 chr17 4821594 4821897 -80616583 - AluSx SINE Alu -11 301 1 572 291 0 55 chr17 4822330 4822529 -80615951 - MIR SINE MIR -72 190 3 1790 88 0 0 chr17 4822647 4822874 -80615606 + AluSg/x SINE Alu 70 296 -14 2030 195 101 43 chr17 4823867 4824400 -80614080 - LTR6A LTR ERV1 0 564 1 2186 112 3 7 chr17 4824719 4825013 -80613467 - AluSx SINE Alu -19 293 1 1554 163 67 14 chr17 4825282 4825564 -80612916 + AluJo SINE Alu 1 297 -15 1759 164 44 0 chr17 4825564 4825856 -80612624 + AluJb SINE Alu 1 306 -6 757 161 0 0 chr17 4825858 4825970 -80612510 + FLAM_C SINE Alu 2 113 -30 24 0 0 0 chr17 4826021 4826045 -80612435 + AT_rich Low_complexity Low_complexity 1 24 0 2426 78 0 0 chr17 4826056 4826352 -80612128 + AluY SINE Alu 1 296 -15 845 138 23 0 chr17 4827088 4827218 -80611262 + FLAM_C SINE Alu 1 133 0 1157 242 11 23 chr17 4827294 4827558 -80610922 - MIR SINE MIR 0 262 2 2485 112 6 8 chr17 4827661 4828017 -80610463 + THE1A LTR MaLR 1 355 0 11729 91 10 8 chr17 4828017 4829594 -80608886 + THE1A-int LTR MaLR 1 1580 0 2272 127 17 17 chr17 4829594 4829949 -80608531 + THE1A LTR MaLR 1 355 0 1376 105 0 0 chr17 4830716 4830888 -80607592 + AluSq SINE Alu 1 172 -141 2159 105 18 0 chr17 4831258 4831544 -80606936 - AluSc SINE Alu -17 292 2 2070 126 7 3 chr17 4831834 4832128 -80606352 + AluSx SINE Alu 1 295 -17 7014 197 63 40 chr17 4832128 4832552 -80605928 + MLT1A1-int LTR MaLR 118 531 -1204 2207 126 3 0 chr17 4832552 4832861 -80605619 - AluSq SINE Alu -3 310 1 7014 197 63 40 chr17 4832861 4834018 -80604462 + MLT1A1-int LTR MaLR 531 1735 0 1825 167 39 28 chr17 4834018 4834170 -80604310 + MLT1A1 LTR MaLR 1 150 -215 1914 156 0 56 chr17 4834170 4834321 -80604159 + AluJo SINE Alu 1 126 -186 2382 96 0 10 chr17 4834321 4834624 -80603856 + AluY SINE Alu 1 300 -11 1914 156 0 56 chr17 4834624 4834793 -80603687 + AluJo SINE Alu 126 303 -9 1825 167 39 28 chr17 4834793 4835000 -80603480 + MLT1A1 LTR MaLR 150 364 -1 498 250 152 32 chr17 4835002 4835079 -80603401 + MLT1L LTR MaLR 201 267 -348 2242 92 46 0 chr17 4835079 4835363 -80603117 + AluSc SINE Alu 1 297 -12 498 250 152 32 chr17 4835363 4835628 -80602852 + MLT1L LTR MaLR 267 615 0 2186 119 14 0 chr17 4835767 4836061 -80602419 - AluSx SINE Alu -14 298 1 2263 102 13 3 chr17 4836197 4836500 -80601980 - AluSq SINE Alu -7 306 1 308 359 145 0 chr17 4836756 4836887 -80601593 - L2 LINE L2 -7 3265 3116 24 0 0 0 chr17 4836887 4836911 -80601569 + AT_rich Low_complexity Low_complexity 1 24 0 527 222 123 6 chr17 4836995 4837166 -80601314 - L2 LINE L2 -6 3307 3117 367 327 157 44 chr17 4837241 4837308 -80601172 - L2 LINE L2 -338 2976 2918 2316 107 3 3 chr17 4837308 4837617 -80600863 - AluSg SINE Alu -1 309 1 367 327 157 44 chr17 4837617 4838225 -80600255 - L2 LINE L2 -396 2918 2177 2252 98 0 30 chr17 4838225 4838530 -80599950 + AluSx SINE Alu 1 296 -16 367 327 157 44 chr17 4838530 4838725 -80599755 - L2 LINE L2 -1137 2177 2006 243 0 0 0 chr17 4838935 4838962 -80599518 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2046 74 4 0 chr17 4838964 4839207 -80599273 - AluSp SINE Alu -31 282 39 191 91 91 0 chr17 4840884 4840917 -80597563 - MIR SINE MIR -115 147 112 1941 163 0 7 chr17 4841051 4841352 -80597128 + AluJo SINE Alu 1 299 -13 2223 111 34 0 chr17 4841591 4841889 -80596591 + AluSx SINE Alu 5 312 0 750 261 33 58 chr17 4842030 4842164 -80596316 + MIR SINE MIR 28 155 -107 2548 73 0 0 chr17 4842164 4842467 -80596013 + AluY SINE Alu 1 303 -8 750 261 33 58 chr17 4842467 4842573 -80595907 + MIR SINE MIR 155 262 0 536 306 70 73 chr17 4842577 4842946 -80595534 - L2 LINE L2 0 3313 2946 1693 162 75 0 chr17 4843102 4843380 -80595100 - AluJb SINE Alu -13 299 1 2098 145 0 3 chr17 4843408 4843704 -80594776 + AluSx SINE Alu 1 295 -17 838 251 95 63 chr17 4843731 4844109 -80594371 + MLT1B LTR MaLR 1 390 0 2405 88 0 0 chr17 4844119 4844414 -80594066 + AluY SINE Alu 1 295 -16 2546 58 0 0 chr17 4844414 4844706 -80593774 + AluY SINE Alu 12 303 -8 1583 219 43 129 chr17 4845159 4845174 -80593306 + L1ME3A LINE L1 5564 5579 -591 2367 112 0 3 chr17 4845174 4845487 -80592993 + AluSx SINE Alu 1 312 0 1583 219 43 129 chr17 4845487 4845751 -80592729 + L1ME3A LINE L1 5579 5864 -306 1518 164 20 55 chr17 4845751 4846069 -80592411 + AluJo SINE Alu 1 308 0 1583 219 43 129 chr17 4846069 4846230 -80592250 + L1ME3A LINE L1 5864 5933 -237 2426 104 0 0 chr17 4846230 4846538 -80591942 + AluSg SINE Alu 2 309 -1 1583 219 43 129 chr17 4846538 4846753 -80591727 + L1ME3A LINE L1 5933 6165 -5 264 30 0 0 chr17 4847224 4847257 -80591223 + (TG)n Simple_repeat Simple_repeat 2 34 0 5067 31 0 0 chr17 4847257 4847873 -80590607 - L1PA4 LINE L1 -4 6151 5536 1942 160 0 0 chr17 4847873 4848167 -80590313 - AluJo SINE Alu -18 294 1 2361 105 7 0 chr17 4848175 4848481 -80589999 - AluSx SINE Alu -4 308 1 685 140 61 0 chr17 4848642 4848756 -80589724 - FLAM_C SINE Alu -17 126 6 2181 190 74 88 chr17 4848789 4848879 -80589601 + MER77 LTR ERV1 46 136 -469 2431 84 0 3 chr17 4848879 4849176 -80589304 + AluSg SINE Alu 1 296 -14 2110 137 0 3 chr17 4849186 4849486 -80588994 + AluSx SINE Alu 1 299 -13 2181 190 74 88 chr17 4849486 4849952 -80588528 + MER77 LTR ERV1 145 605 0 757 140 0 113 chr17 4850141 4850291 -80588189 + FLAM_A SINE Alu 1 133 0 2384 102 0 22 chr17 4850298 4850612 -80587868 + AluSg SINE Alu 1 307 -3 2391 92 0 0 chr17 4850620 4850913 -80587567 + AluSx SINE Alu 4 296 -16 298 264 0 0 chr17 4851277 4851349 -80587131 - MIR SINE MIR -176 86 15 236 152 22 0 chr17 4851389 4851435 -80587045 + L2 LINE L2 3224 3270 -2 2164 101 0 21 chr17 4851632 4851919 -80586561 - AluSq SINE Alu -31 282 2 2463 76 0 7 chr17 4851931 4852233 -80586247 - AluY SINE Alu -11 300 1 2404 99 0 0 chr17 4852505 4852807 -80585673 - AluSq SINE Alu -11 302 1 324 274 239 9 chr17 4852932 4853045 -80585435 - MIR3 SINE MIR -21 187 49 2267 110 0 23 chr17 4853383 4853692 -80584788 - AluSx SINE Alu -10 302 1 333 234 115 40 chr17 4853728 4853882 -80584598 + MIR SINE MIR 34 204 -58 2381 74 0 10 chr17 4853981 4854279 -80584201 - AluY SINE Alu -16 295 1 291 28 0 0 chr17 4854280 4854316 -80584164 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2169 105 22 0 chr17 4854316 4854593 -80583887 - AluSg SINE Alu -27 283 1 2268 118 0 0 chr17 4855021 4855317 -80583163 + AluSx SINE Alu 1 296 -16 2222 120 0 3 chr17 4855317 4855616 -80582864 + AluSq SINE Alu 1 298 -15 1811 133 29 32 chr17 4855617 4855933 -80582547 + MER21A LTR ERV1 617 931 0 311 265 102 48 chr17 4855933 4856099 -80582381 + HAL1 LINE L1 2325 2499 -8 2263 113 3 3 chr17 4856820 4857121 -80581359 - AluSx SINE Alu -2 310 10 1019 144 4 105 chr17 4857191 4857420 -80581060 + L1 LINE L1 4827 5032 -1114 1028 113 0 0 chr17 4857420 4857562 -80580918 + AluSp/q SINE Alu 168 309 -4 363 236 28 69 chr17 4857724 4857868 -80580612 + MER117 DNA MER1_type 3 140 -57 484 181 0 0 chr17 4858338 4858421 -80580059 - Tigger5 DNA MER2_type 0 2323 2241 2173 115 26 0 chr17 4858421 4858725 -80579755 + AluSx SINE Alu 1 312 0 901 87 17 0 chr17 4858725 4858840 -80579640 - AluSq/x SINE Alu -195 117 1 1299 111 12 0 chr17 4858871 4859042 -80579438 + AluSg/x SINE Alu 138 310 -2 419 226 0 12 chr17 4859048 4859132 -80579348 - Tigger5 DNA MER2_type -2240 83 1 2131 123 0 3 chr17 4859542 4859864 -80578616 + AluSx SINE Alu 1 321 0 2395 99 0 3 chr17 4860267 4860581 -80577899 + AluSp SINE Alu 1 313 0 894 132 14 127 chr17 4860684 4860747 -80577733 - MER5A DNA MER1_type 0 189 121 2183 120 3 19 chr17 4860747 4861064 -80577416 + AluSx SINE Alu 1 312 0 894 132 14 127 chr17 4861064 4861213 -80577267 - MER5A DNA MER1_type -68 121 1 516 180 73 101 chr17 4861224 4861383 -80577097 + MER5B DNA MER1_type 4 159 -19 8201 64 2 3 chr17 4861383 4862353 -80576127 - LTR5 LTR ERVK 0 969 1 516 180 73 101 chr17 4862353 4862371 -80576109 + MER5B DNA MER1_type 159 176 -2 283 353 101 29 chr17 4862559 4862741 -80575739 - L2 LINE L2 -1968 1346 1132 2199 107 3 17 chr17 4862741 4862904 -80575576 - AluSg SINE Alu -16 294 135 2418 98 3 0 chr17 4862904 4863211 -80575269 - AluSg SINE Alu -2 308 1 2199 107 3 17 chr17 4863211 4863345 -80575135 - AluSg SINE Alu -175 135 1 283 353 101 29 chr17 4863345 4863468 -80575012 - L2 LINE L2 -2182 1132 1019 2325 78 3 19 chr17 4863827 4864134 -80574346 + AluSq SINE Alu 1 302 -11 2198 103 3 10 chr17 4864140 4864450 -80574030 + AluSp SINE Alu 1 308 -5 194 319 42 0 chr17 4864468 4864540 -80573940 - L2 LINE L2 -356 2958 2884 293 286 13 0 chr17 4865857 4865934 -80572546 - L2 LINE L2 -9 3263 3186 1652 127 91 36 chr17 4865962 4866237 -80572243 + AluJb SINE Alu 1 290 -22 2237 114 3 0 chr17 4866480 4866779 -80571701 + AluSx SINE Alu 1 300 -12 608 199 12 53 chr17 4867164 4867335 -80571145 - Charlie2 DNA MER1_type -7 2855 2692 1527 87 36 14 chr17 4867816 4868035 -80570445 - AluY SINE Alu -4 307 84 386 320 28 39 chr17 4868109 4868290 -80570190 + Charlie2 DNA MER1_type 1 179 -2603 1575 190 3 27 chr17 4868291 4868319 -80570161 - AluJb SINE Alu -2 310 283 264 30 0 0 chr17 4868319 4868352 -80570128 + (TTATA)n Simple_repeat Simple_repeat 4 36 0 1575 190 3 27 chr17 4868352 4868623 -80569857 - AluJb SINE Alu -29 283 18 260 252 110 47 chr17 4868631 4868758 -80569722 + Charlie2 DNA MER1_type 1931 2065 -797 2066 112 46 0 chr17 4869088 4869373 -80569107 + AluSp SINE Alu 1 298 -15 600 259 24 24 chr17 4869383 4869549 -80568931 - MER5A DNA MER1_type 0 189 24 2247 100 4 0 chr17 4869660 4869979 -80568501 - AluSx SINE Alu 0 320 1 2636 0 0 17 chr17 4870081 4870374 -80568106 - AluYa5 SINE Alu -6 305 18 1500 108 28 9 chr17 4870409 4870621 -80567859 + AluSg/x SINE Alu 92 307 -5 419 310 71 25 chr17 4870890 4871087 -80567393 - MIR SINE MIR 0 262 57 2193 108 3 7 chr17 4872191 4872498 -80565982 + AluSx SINE Alu 1 306 -6 751 174 122 31 chr17 4872498 4872694 -80565786 + MLT1A2 LTR MaLR 161 374 0 2149 101 3 0 chr17 4872916 4873202 -80565278 + AluSx SINE Alu 1 287 -25 189 0 0 0 chr17 4873202 4873223 -80565257 + (CA)n Simple_repeat Simple_repeat 2 22 0 200 259 25 0 chr17 4873908 4873989 -80564491 + (CCCCG)n Simple_repeat Simple_repeat 4 86 0 421 319 103 5 chr17 4874340 4874544 -80563936 + MIR SINE MIR 31 254 -8 233 265 128 26 chr17 4874530 4874647 -80563833 - L2 LINE L2 -301 3012 2884 * 293 304 25 44 chr17 4874762 4874889 -80563591 + L2 LINE L2 3159 3284 -29 2394 78 0 3 chr17 4874889 4875185 -80563295 + AluSg SINE Alu 3 297 -13 293 304 25 44 chr17 4875185 4875215 -80563265 + L2 LINE L2 3284 3313 0 456 273 106 30 chr17 4875237 4875435 -80563045 - L2 LINE L2 -515 2799 2587 1662 114 124 40 chr17 4875468 4875741 -80562739 + AluSg SINE Alu 1 296 -14 2187 222 61 48 chr17 4875853 4876555 -80561925 - LTR28 LTR ERV1 -2 1018 308 317 174 23 47 chr17 4876524 4876610 -80561870 - LTR1 LTR ERV1 -595 190 107 * 388 244 267 0 chr17 4876622 4876757 -80561723 - LTR28 LTR ERV1 -842 178 8 24 0 0 0 chr17 4877390 4877414 -80561066 + AT_rich Low_complexity Low_complexity 1 24 0 300 319 104 7 chr17 4877441 4877576 -80560904 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 4878205 4878229 -80560251 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 287 257 129 36 chr17 4878567 4878707 -80559773 - MIR3 SINE MIR -12 196 44 212 184 20 20 chr17 4880267 4880316 -80558164 + (CCCCAG)n Simple_repeat Simple_repeat 3 51 0 198 71 0 0 chr17 4881103 4881131 -80557349 + (GCGTG)n Simple_repeat Simple_repeat 4 31 0 279 133 0 0 chr17 4881615 4881660 -80556820 + (CA)n Simple_repeat Simple_repeat 1 45 0 249 117 30 0 chr17 4882244 4882293 -80556187 - MLT-int LTR MaLR -1159 212 140 729 183 17 46 chr17 4882330 4882505 -80555975 + MLT1C LTR MaLR 298 467 0 3082 133 4 12 chr17 4882703 4883190 -80555290 + MER1A DNA MER1_type 47 529 0 549 68 0 0 chr17 4883394 4883468 -80555012 + (CA)n Simple_repeat Simple_repeat 2 75 0 2390 94 3 7 chr17 4883514 4883821 -80554659 - AluSp SINE Alu -7 306 1 196 202 22 22 chr17 4884372 4884461 -80554019 + CT-rich Low_complexity Low_complexity 1 89 0 210 222 0 0 chr17 4884775 4884820 -80553660 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 4885304 4885329 -80553151 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1902 163 21 6 chr17 4885409 4885747 -80552733 + MER2 DNA MER2_type 2 344 0 233 175 18 53 chr17 4886764 4886821 -80551659 - SN5 Other centromeric -77 378 324 1069 295 42 31 chr17 4892159 4892831 -80545649 + L1MC3 LINE L1 5486 6164 -1621 502 248 39 107 chr17 4898007 4898147 -80540333 - L1MD3 LINE L1 0 7995 7886 1604 163 0 27 chr17 4898147 4898447 -80540033 + AluJo SINE Alu 1 292 -20 502 248 39 107 chr17 4898447 4898616 -80539864 - L1MD3 LINE L1 -109 7886 7707 372 173 0 40 chr17 4898820 4898895 -80539585 - AluJ/FRAM SINE Alu -11 291 220 * 1703 130 83 7 chr17 4898887 4899163 -80539317 + MER7A DNA MER2_type 48 342 -4 1692 137 16 46 chr17 4900784 4900918 -80537562 + AluSx SINE Alu 1 137 -175 6200 34 0 8 chr17 4900918 4901648 -80536832 + SVA Other Other 661 1384 -2 1692 137 16 46 chr17 4901648 4901819 -80536661 + AluSx SINE Alu 137 297 -15 239 222 30 30 chr17 4902093 4902235 -80536245 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 229 365 117 7 chr17 4905198 4905335 -80533145 - MIR3 SINE MIR -15 193 42 678 200 113 16 chr17 4905640 4905771 -80532709 + MER3 DNA MER1_type 4 160 -49 1535 202 10 0 chr17 4905771 4906078 -80532402 - AluJb SINE Alu -2 310 1 678 200 113 16 chr17 4906078 4906131 -80532349 + MER3 DNA MER1_type 160 206 -3 31 44 0 0 chr17 4906775 4906820 -80531660 + AT_rich Low_complexity Low_complexity 1 45 0 2173 121 0 3 chr17 4907021 4907334 -80531146 + AluSx SINE Alu 1 312 0 577 197 8 38 chr17 4907360 4907492 -80530988 + FAM SINE Alu 1 45 -4 358 302 147 16 chr17 4907784 4907913 -80530567 + MIR3 SINE MIR 2 147 -61 1967 118 7 0 chr17 4907916 4908195 -80530285 + AluSq SINE Alu 1 281 -32 399 21 0 0 chr17 4908195 4908243 -80530237 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1268 204 92 79 chr17 4908332 4908405 -80530075 - MLT1C LTR MaLR 0 467 396 2111 91 7 10 chr17 4908405 4908701 -80529779 - AluSc SINE Alu -14 295 1 1268 204 92 79 chr17 4908701 4909083 -80529397 - MLT1C LTR MaLR -71 396 6 1564 217 141 40 chr17 4909130 4909344 -80529136 + L1ME3A LINE L1 4399 4590 -1556 347 0 23 0 chr17 4909344 4909387 -80529093 + (TG)n Simple_repeat Simple_repeat 1 44 0 1564 217 141 40 chr17 4909387 4909869 -80528611 + L1ME3A LINE L1 4590 5165 -981 2013 111 0 33 chr17 4909869 4910175 -80528305 + AluSg SINE Alu 1 296 -14 880 260 83 42 chr17 4910176 4910638 -80527842 + L1ME3A LINE L1 5392 5899 -271 1692 168 3 10 chr17 4910638 4910936 -80527544 + AluJb SINE Alu 6 301 -11 880 260 83 42 chr17 4910936 4910996 -80527484 + L1ME3A LINE L1 5899 5955 -215 317 297 34 47 chr17 4911063 4911211 -80527269 + L1ME3A LINE L1 5968 6113 -57 2158 94 3 7 chr17 4911211 4911509 -80526971 - AluSp SINE Alu -16 297 1 2111 119 0 3 chr17 4911576 4911878 -80526602 - AluSg SINE Alu -9 301 1 1531 181 13 10 chr17 4912663 4912961 -80525519 - AluJo SINE Alu -13 299 1 37 52 0 0 chr17 4913651 4913709 -80524771 + AT_rich Low_complexity Low_complexity 1 58 0 2173 106 6 3 chr17 4914230 4914542 -80523938 - AluSp SINE Alu 0 313 1 1849 153 7 3 chr17 4914673 4914968 -80523512 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 4914970 4915014 -80523466 + AT_rich Low_complexity Low_complexity 1 44 -50 2079 105 0 13 chr17 4915014 4915328 -80523152 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 4915328 4915378 -80523102 + AT_rich Low_complexity Low_complexity 44 94 0 799 236 112 117 chr17 4915512 4915597 -80522883 - L2 LINE L2 -799 2515 2431 2024 95 15 0 chr17 4915597 4915870 -80522610 - AluSc SINE Alu -32 277 1 799 236 112 117 chr17 4915870 4916229 -80522251 - L2 LINE L2 -883 2431 2073 1780 133 7 13 chr17 4916229 4916529 -80521951 + AluSx SINE Alu 1 298 -14 2579 13 10 7 chr17 4916996 4917300 -80521180 + AluYa5 SINE Alu 1 305 -6 2083 103 4 0 chr17 4917402 4917726 -80520754 + AluSx SINE Alu 1 325 0 646 259 24 24 chr17 4917836 4918002 -80520478 + MER5A DNA MER1_type 24 189 0 1920 112 46 0 chr17 4918012 4918297 -80520183 - AluSp SINE Alu -15 298 1 278 254 111 40 chr17 4918626 4918752 -80519728 - Charlie2 DNA MER1_type -797 2065 1931 1269 191 8 12 chr17 4918760 4919017 -80519463 + AluJb SINE Alu 18 273 -39 31 44 0 0 chr17 4919643 4919688 -80518792 + AT_rich Low_complexity Low_complexity 1 45 0 2179 125 0 0 chr17 4919889 4920201 -80518279 + AluSx SINE Alu 1 312 0 556 199 8 38 chr17 4920227 4920358 -80518122 + FAM SINE Alu 1 44 -5 358 302 147 16 chr17 4920647 4920776 -80517704 + MIR3 SINE MIR 2 147 -61 1899 120 18 0 chr17 4920779 4921063 -80517417 + AluSq SINE Alu 1 289 -24 288 0 0 0 chr17 4921071 4921103 -80517377 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 378 171 0 14 chr17 4921192 4921262 -80517218 - MLT1C LTR MaLR 0 467 399 2227 72 10 3 chr17 4921263 4921556 -80516924 - AluSc SINE Alu -14 295 1 1860 133 0 17 chr17 4921556 4921849 -80516631 - AluJb SINE Alu -14 298 11 643 280 63 19 chr17 4921849 4922161 -80516319 - L1ME LINE L1 -360 5806 5479 1955 93 6 42 chr17 4922170 4922481 -80515999 + AluSg SINE Alu 2 301 -9 247 162 0 0 chr17 4922540 4922577 -80515903 - MLT1B LTR MaLR 0 390 354 817 192 13 0 chr17 4922620 4922776 -80515704 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 4922827 4922862 -80515618 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 4922877 4922998 -80515482 + CT-rich Low_complexity Low_complexity 1 123 0 556 189 0 27 chr17 4922998 4923109 -80515371 - AluJb SINE Alu -3 309 202 1356 181 4 0 chr17 4923111 4923349 -80515131 - AluJo SINE Alu -73 239 1 328 203 125 55 chr17 4923349 4923477 -80515003 - MLT1B LTR MaLR -252 138 2 2077 116 3 0 chr17 4923543 4923835 -80514645 - AluSg SINE Alu -16 294 2 1875 145 0 0 chr17 4923929 4924218 -80514262 - AluJb SINE Alu -23 289 1 1970 83 3 95 chr17 4924387 4924524 -80513956 + AluSq SINE Alu 1 149 -164 2033 78 50 0 chr17 4924524 4924807 -80513673 + AluY SINE Alu 1 297 -14 1970 83 3 95 chr17 4924807 4925006 -80513474 + AluSq SINE Alu 149 306 -7 2101 117 0 3 chr17 4925786 4926085 -80512395 - AluSg SINE Alu -12 298 1 1960 107 0 13 chr17 4926085 4926384 -80512096 - AluSx SINE Alu -17 295 1 413 271 145 42 chr17 4926551 4926765 -80511715 - MIR SINE MIR -6 256 21 1067 153 22 9 chr17 4926794 4927016 -80511464 - AluSq SINE Alu -4 309 85 262 239 31 25 chr17 4927150 4927309 -80511171 + (CGCGG)n Simple_repeat Simple_repeat 1 160 0 26 50 0 0 chr17 4927448 4927488 -80510992 + GC_rich Low_complexity Low_complexity 1 40 0 405 0 0 0 chr17 4927500 4927545 -80510935 + (GA)n Simple_repeat Simple_repeat 2 46 0 599 228 233 5 chr17 4927546 4927752 -80510728 - L2 LINE L2 -1239 2075 1823 1368 270 156 38 chr17 4927965 4928557 -80509923 - L2 LINE L2 -2241 1073 390 1876 157 0 7 chr17 4928557 4928863 -80509617 + AluJb SINE Alu 5 308 -4 1368 270 156 38 chr17 4928863 4928948 -80509532 - L2 LINE L2 -2924 390 316 366 171 11 34 chr17 4929269 4929357 -80509123 - L1MA9 LINE L1 -5 6307 6222 3074 31 3 0 chr17 4929455 4929811 -80508669 - L1P2 LINE L1 -354 5801 5445 757 71 0 0 chr17 4929811 4929905 -80508575 + L1PA4 LINE L1 6055 6152 -3 2016 115 14 0 chr17 4930606 4930892 -80507588 + AluSq SINE Alu 1 290 -23 1382 180 11 18 chr17 4931023 4931326 -80507154 - AluSx SINE Alu 0 301 1 21 36 0 0 chr17 4931688 4931716 -80506764 + AT_rich Low_complexity Low_complexity 1 28 0 2131 156 99 17 chr17 4932083 4932505 -80505975 - MSTB2 LTR MaLR 0 457 1 683 281 92 39 chr17 4933694 4934181 -80504299 + L1ME4a LINE L1 5608 6120 -1 1287 152 0 0 chr17 4934261 4934458 -80504022 + AluJb SINE Alu 85 322 0 234 73 0 24 chr17 4934458 4934499 -80503981 + (CAAAA)n Simple_repeat Simple_repeat 1 175 0 183 244 89 67 chr17 4935627 4935717 -80502763 + L2 LINE L2 436 527 -2787 1641 154 44 17 chr17 4936389 4936682 -80501798 - AluJb SINE Alu -11 301 1 411 306 148 27 chr17 4938030 4938213 -80500267 + MIR SINE MIR 34 238 -24 542 205 74 95 chr17 4938254 4938305 -80500175 + Charlie1 DNA MER1_type 32 83 -2678 1994 130 0 19 chr17 4938305 4938620 -80499860 - AluJb SINE Alu -3 309 1 542 205 74 95 chr17 4938620 4938758 -80499722 + Charlie1 DNA MER1_type 83 217 -2544 486 165 52 0 chr17 4938768 4938865 -80499615 + Charlie1 DNA MER1_type 2630 2731 -30 205 276 51 71 chr17 4938901 4938999 -80499481 + MIR SINE MIR 162 257 -5 1433 170 48 15 chr17 4939950 4940255 -80498225 + AluJo SINE Alu 6 319 0 2184 94 0 29 chr17 4940762 4941070 -80497410 + AluSx SINE Alu 1 299 -13 1995 104 7 3 chr17 4941130 4941417 -80497063 + AluSc SINE Alu 3 290 -19 2097 119 6 72 chr17 4944020 4944381 -80494099 + MER1B DNA MER1_type 1 337 0 2335 93 3 0 chr17 4944989 4945300 -80493180 + AluSp SINE Alu 1 312 -1 438 263 97 41 chr17 4945566 4945789 -80492691 + L1MC/D LINE L1 2963 3211 -2935 2028 97 7 3 chr17 4945789 4946087 -80492393 + AluY SINE Alu 1 299 -12 438 263 97 41 chr17 4946087 4946182 -80492298 + L1MC/D LINE L1 3211 3299 -2847 946 88 0 0 chr17 4946300 4946425 -80492055 + AluSq/x SINE Alu 1 125 -187 2121 109 3 0 chr17 4946429 4946732 -80491748 + AluSg SINE Alu 1 304 -6 787 278 55 44 chr17 4946734 4947299 -80491181 + L1MC/D LINE L1 3422 3992 -2154 254 247 21 10 chr17 4947605 4947702 -80490778 + L1MC/D LINE L1 4272 4369 -1777 1779 121 10 39 chr17 4948934 4949240 -80489240 - AluSq SINE Alu -16 297 1 761 143 0 0 chr17 4949426 4949538 -80488942 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 4949545 4949571 -80488909 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 4953570 4953599 -80484881 + AT_rich Low_complexity Low_complexity 1 29 0 681 246 15 41 chr17 4953600 4953795 -80484685 - LTR41 LTR ERVL -583 190 1 2442 107 8 8 chr17 4954039 4954394 -80484086 - THE1A LTR MaLR 0 355 1 11942 84 11 5 chr17 4954394 4955964 -80482516 - THE1A-int LTR MaLR 0 1580 1 2444 102 11 8 chr17 4955964 4956318 -80482162 - THE1A LTR MaLR 0 355 1 1170 239 15 23 chr17 4956421 4956684 -80481796 + MIR SINE MIR 2 262 0 831 138 23 0 chr17 4956759 4956889 -80481591 - FLAM_C SINE Alu 0 133 1 2386 61 0 3 chr17 4957620 4957917 -80480563 - AluY SINE Alu -15 296 1 2062 120 13 0 chr17 4958074 4958382 -80480098 + AluSx SINE Alu 1 312 0 1503 194 39 8 chr17 4958384 4958744 -80479736 + L1MC/D LINE L1 4480 4850 -1296 2182 101 0 0 chr17 4958749 4959045 -80479435 - AluY SINE Alu -15 296 1 253 180 0 0 chr17 4959049 4959099 -80479381 + L1MA10 LINE L1 6285 6334 0 1648 88 0 0 chr17 4960416 4960633 -80477847 + AluSg/x SINE Alu 83 299 -11 184 313 127 45 chr17 4960754 4960888 -80477592 - L2 LINE L2 -218 3054 2910 360 270 36 0 chr17 4962185 4962296 -80476184 + L1MC/D LINE L1 5486 5600 -744 2209 113 0 0 chr17 4962422 4962731 -80475749 + AluSq SINE Alu 1 309 -4 303 124 101 34 chr17 4962731 4962787 -80475693 - LTR37A LTR ERV1 -8 418 352 1499 116 0 0 chr17 4962787 4962994 -80475486 + AluSg/x SINE Alu 85 291 -21 303 124 101 34 chr17 4962994 4963026 -80475454 - LTR37A LTR ERV1 -74 352 324 347 107 0 0 chr17 4963032 4963088 -80475392 + Alu SINE Alu 247 302 0 686 193 33 82 chr17 4963094 4963165 -80475315 - LTR37A LTR ERV1 -111 315 242 4423 131 68 30 chr17 4963165 4963334 -80475146 + LTR39 LTR ERV1 1 162 -621 1998 111 0 20 chr17 4963334 4963665 -80474815 + AluSx SINE Alu 1 312 0 4423 131 68 30 chr17 4963665 4964080 -80474400 + LTR39 LTR ERV1 162 622 -161 2398 81 0 0 chr17 4964080 4964388 -80474092 + AluSx SINE Alu 1 308 -4 4423 131 68 30 chr17 4964388 4964557 -80473923 + LTR39 LTR ERV1 622 783 0 686 193 33 82 chr17 4964557 4964728 -80473752 - LTR37A LTR ERV1 -184 242 85 3184 123 35 0 chr17 4964744 4965206 -80473274 + MER1A DNA MER1_type 37 514 -15 1969 87 21 24 chr17 4965329 4965617 -80472863 - AluSc SINE Alu -14 295 9 897 169 38 0 chr17 4965641 4965801 -80472679 - FRAM SINE Alu 0 166 1 2368 57 0 10 chr17 4966330 4966629 -80471851 + AluSg SINE Alu 4 299 -11 2580 162 19 71 chr17 4966853 4966882 -80471598 + L1MB2 LINE L1 5446 5475 -696 222 37 0 0 chr17 4966882 4966909 -80471571 + (CA)n Simple_repeat Simple_repeat 2 28 0 2580 162 19 71 chr17 4966909 4967245 -80471235 + L1MB2 LINE L1 5475 5827 -344 2222 91 0 0 chr17 4967245 4967541 -80470939 + AluSx SINE Alu 1 296 -16 2580 162 19 71 chr17 4967541 4967664 -80470816 + L1MB2 LINE L1 5827 5901 -270 2272 96 0 0 chr17 4967664 4967957 -80470523 + AluSx SINE Alu 3 295 -17 2580 162 19 71 chr17 4967957 4968054 -80470426 + L1MB2 LINE L1 5901 6002 -169 22 70 0 0 chr17 4968113 4968156 -80470324 + AT_rich Low_complexity Low_complexity 1 43 0 1452 139 7 85 chr17 4968156 4968206 -80470274 + Tigger2 DNA MER2_type 2446 2498 -220 2107 88 12 34 chr17 4968206 4968526 -80469954 - AluSp SINE Alu 0 313 1 2029 133 3 0 chr17 4968526 4968827 -80469653 - AluSx SINE Alu -10 302 1 1452 139 7 85 chr17 4968827 4969070 -80469410 + Tigger2 DNA MER2_type 2496 2717 -1 194 200 160 20 chr17 4969088 4969138 -80469342 + L2 LINE L2 3024 3080 -233 697 239 133 70 chr17 4969138 4969428 -80469052 + L1MEc LINE L1 805 1140 -5256 2263 91 7 0 chr17 4969428 4969737 -80468743 + AluSp SINE Alu 1 311 -2 697 239 133 70 chr17 4969737 4969944 -80468536 + L1MEc LINE L1 1140 1333 -5063 721 170 7 21 chr17 4970205 4970346 -80468134 - AluY SINE Alu -22 289 151 278 150 0 0 chr17 4970346 4970386 -80468094 - Alu SINE Alu -259 40 1 266 188 12 47 chr17 4970388 4970473 -80468007 + L1MC4a LINE L1 5858 5939 -1869 2148 112 0 0 chr17 4970473 4970777 -80467703 + AluSq SINE Alu 1 304 -9 4215 185 43 21 chr17 4970833 4971502 -80466978 - L1MB7 LINE L1 0 6184 5531 2039 112 7 7 chr17 4971502 4971798 -80466682 - AluSq SINE Alu -17 296 1 4215 185 43 21 chr17 4971798 4972125 -80466355 - L1MB7 LINE L1 -653 5531 5212 2136 113 6 0 chr17 4972125 4972436 -80466044 - AluSp SINE Alu 0 313 1 4215 185 43 21 chr17 4972436 4972905 -80465575 - L1MB7 LINE L1 -972 5212 4683 351 125 0 0 chr17 4972911 4972959 -80465521 + Alu SINE Alu 1 48 -253 1267 281 93 21 chr17 4973092 4973662 -80464818 - HsTC2a DNA Tc2 0 744 134 204 40 0 0 chr17 4973878 4973903 -80464577 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 817 192 13 0 chr17 4974396 4974552 -80463928 + MLT1B LTR MaLR 192 349 -41 247 162 0 0 chr17 4974595 4974632 -80463848 + MLT1B LTR MaLR 354 390 0 2063 77 6 45 chr17 4974691 4975003 -80463477 - AluSg SINE Alu -9 301 2 629 283 80 23 chr17 4975012 4975312 -80463168 + L1MC/D LINE L1 5479 5795 -2013 1898 129 0 17 chr17 4975324 4975619 -80462861 + AluJb SINE Alu 11 300 -12 2707 6 0 22 chr17 4975619 4975936 -80462544 + AluY SINE Alu 1 310 -1 2204 105 0 0 chr17 4975936 4976230 -80462250 + AluSp SINE Alu 1 294 -19 1177 135 0 0 chr17 4976230 4976408 -80462072 + AluSc SINE Alu 132 309 0 1136 142 0 0 chr17 4976911 4977080 -80461400 - AluJb SINE Alu -143 169 1 2200 73 7 17 chr17 4977712 4978012 -80460468 - AluY SINE Alu -14 297 1 413 115 16 0 chr17 4978285 4978346 -80460134 - AluS SINE Alu -255 63 2 2299 80 0 0 chr17 4978431 4978730 -80459750 + AluSg SINE Alu 1 299 -11 333 280 131 0 chr17 4978947 4979054 -80459426 + MIR3 SINE MIR 36 156 -52 224 283 17 0 chr17 4979336 4979396 -80459084 - L2 LINE L2 -273 3040 2980 2061 121 3 10 chr17 4980119 4980433 -80458047 - AluSp SINE Alu 0 313 2 1123 224 92 7 chr17 4980758 4981039 -80457441 + MLT1D LTR MaLR 41 345 -160 1778 148 7 3 chr17 4981214 4981521 -80456959 - AluJo SINE Alu 0 308 1 494 238 61 37 chr17 4981587 4981751 -80456729 + MLT1H1 LTR MaLR 10 177 -413 710 96 0 0 chr17 4981754 4981848 -80456632 + AluSg1 SINE Alu 2 95 -214 830 215 37 19 chr17 4983046 4983260 -80455220 + LTR7 LTR ERV1 233 450 0 1455 94 5 0 chr17 4983260 4983463 -80455017 + AluSg1 SINE Alu 93 296 -16 798 261 92 38 chr17 4983466 4983834 -80454646 + MLT1H1 LTR MaLR 168 555 0 599 208 219 6 chr17 4984102 4984280 -80454200 + MLT1D LTR MaLR 290 505 0 2319 88 0 3 chr17 4984311 4984619 -80453861 - AluSx SINE Alu -5 307 1 856 169 5 77 chr17 4984928 4985123 -80453357 + LTR62 LTR ERVK 1 181 -538 1214 206 0 23 chr17 4985148 4985449 -80453031 + AluSg SINE Alu 1 294 -16 2278 66 3 10 chr17 4985532 4985835 -80452645 + AluSp SINE Alu 1 301 -12 2205 113 0 3 chr17 4985844 4986155 -80452325 + AluSq SINE Alu 1 310 -3 1507 123 0 25 chr17 4986211 4986446 -80452034 + AluSq SINE Alu 85 313 0 5013 78 39 58 chr17 4986450 4987306 -80451174 + SVA Other Other 29 867 -519 244 323 10 10 chr17 4987437 4987536 -80450944 + L1MC4a LINE L1 5755 5853 -1955 802 134 0 0 chr17 4987551 4987670 -80450810 - AluSp/q SINE Alu -19 294 176 947 138 0 7 chr17 4987670 4987822 -80450658 - AluSg/x SINE Alu -8 302 152 293 143 0 0 chr17 4987822 4987864 -80450616 - Alu SINE Alu -259 42 1 289 191 12 36 chr17 4987866 4987950 -80450530 + L1MC4a LINE L1 5858 5939 -1869 1631 113 0 0 chr17 4987950 4988181 -80450299 + AluSx SINE Alu 1 231 -81 1387 141 0 0 chr17 4988282 4988495 -80449985 + AluSg/x SINE Alu 98 310 0 337 257 37 37 chr17 4988540 4988649 -80449831 + MIR SINE MIR 154 262 0 1719 148 16 29 chr17 4988770 4989080 -80449400 + AluSx SINE Alu 1 306 -6 1994 104 0 11 chr17 4989140 4989451 -80449029 + AluSx SINE Alu 1 308 0 863 91 0 0 chr17 4989474 4989584 -80448896 + AluSq/x SINE Alu 1 110 -203 225 94 0 0 chr17 4990027 4990059 -80448421 + (T)n Simple_repeat Simple_repeat 1 32 0 761 147 0 0 chr17 4990060 4990176 -80448304 - AluSc SINE Alu -62 247 132 1969 122 3 7 chr17 4990176 4990470 -80448010 - AluSx SINE Alu -19 293 1 697 203 8 8 chr17 4991283 4991416 -80447064 + FLAM_A SINE Alu 1 133 0 2048 95 10 23 chr17 4991854 4992159 -80446321 - AluSp SINE Alu -12 301 1 257 283 33 0 chr17 4992196 4992256 -80446224 - L2 LINE L2 -54 3218 3157 713 204 119 6 chr17 4992288 4992464 -80446016 - MIR SINE MIR -48 214 19 606 160 40 8 chr17 4992464 4992589 -80445891 - L1MB8 LINE L1 -1 6177 6049 1104 179 0 0 chr17 4992589 4992785 -80445695 - AluJb SINE Alu -6 306 111 180 0 0 0 chr17 4992785 4992805 -80445675 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1841 115 25 4 chr17 4992805 4993083 -80445397 - AluSx SINE Alu -27 285 2 3227 219 104 66 chr17 4993086 4993600 -80444880 - L1M4 LINE L1 -863 5283 4790 2093 123 0 22 chr17 4993600 4993918 -80444562 - AluSx SINE Alu -1 311 1 3227 219 104 66 chr17 4993918 4994147 -80444333 - L1M4 LINE L1 -1356 4790 4571 261 108 0 0 chr17 4994147 4994184 -80444296 + THE1B LTR MaLR 328 364 0 3227 219 104 66 chr17 4994184 4994309 -80444171 - L1M4 LINE L1 -1575 4571 4452 1719 168 0 7 chr17 4994309 4994606 -80443874 + AluJb SINE Alu 1 295 -17 3227 219 104 66 chr17 4994606 4995176 -80443304 - L1M4 LINE L1 -1694 4452 3750 808 171 0 49 chr17 4995180 4995192 -80443288 - AluSg/x SINE Alu -23 289 278 1765 156 0 10 chr17 4995192 4995493 -80442987 - AluJb SINE Alu -13 299 2 243 0 0 0 chr17 4995493 4995520 -80442960 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 808 171 0 49 chr17 4995520 4995670 -80442810 - AluSg/x SINE Alu -32 280 134 1860 142 10 3 chr17 4995670 4995973 -80442507 - AluSx SINE Alu -7 305 1 701 243 177 54 chr17 4996599 4996751 -80441729 - MLT1D LTR MaLR 0 390 258 2258 92 3 3 chr17 4996751 4997056 -80441424 - AluSx SINE Alu -7 305 1 701 243 177 54 chr17 4997056 4997294 -80441186 - MLT1D LTR MaLR -132 258 1 1079 172 35 25 chr17 4998146 4998349 -80440131 + AluJo SINE Alu 86 290 -22 304 292 211 44 chr17 4999657 5000017 -80438463 + L2 LINE L2 664 1083 -2231 1008 266 51 43 chr17 5000043 5000393 -80438087 + MER67C LTR ERV1 157 509 -201 2044 132 3 0 chr17 5000393 5000696 -80437784 + AluSx SINE Alu 1 304 -8 1177 168 0 26 chr17 5000760 5000992 -80437488 - AluJb SINE Alu -2 310 85 687 181 0 0 chr17 5000992 5001097 -80437383 - AluSg/x SINE Alu -62 250 146 23 0 0 0 chr17 5001982 5002005 -80436475 + GC_rich Low_complexity Low_complexity 1 23 0 390 313 50 56 chr17 5003214 5003393 -80435087 + MER5B DNA MER1_type 1 178 0 2169 96 0 3 chr17 5003676 5003969 -80434511 + AluSq SINE Alu 1 292 -21 230 317 39 29 chr17 5004049 5004153 -80434327 + L2 LINE L2 2928 3032 -240 719 140 18 0 chr17 5004746 5004860 -80433620 + FLAM_C SINE Alu 2 117 -26 21 57 0 0 chr17 5004860 5004895 -80433585 + AT_rich Low_complexity Low_complexity 1 35 0 2053 117 3 0 chr17 5006277 5006576 -80431904 + AluSg SINE Alu 1 300 -10 209 301 243 10 chr17 5008567 5008670 -80429810 + MIR3 SINE MIR 4 130 -78 407 113 0 0 chr17 5008697 5008768 -80429712 - Alu SINE Alu -1 310 240 297 145 84 72 chr17 5009009 5009092 -80429388 + FAM SINE Alu 61 144 -31 251 143 0 24 chr17 5009078 5009120 -80429360 + FAM SINE Alu 104 144 -35 * 1596 181 0 0 chr17 5009125 5009395 -80429085 + AluJb SINE Alu 22 291 -21 581 286 160 6 chr17 5009468 5009793 -80428687 - L1ME LINE L1 -317 5804 5430 1459 166 0 46 chr17 5009856 5010140 -80428340 - AluJo SINE Alu -37 275 5 21 0 0 0 chr17 5010143 5010164 -80428316 + AT_rich Low_complexity Low_complexity 1 21 0 1506 197 106 6 chr17 5010168 5010498 -80427982 - L1MC4 LINE L1 -1139 6903 6541 1395 203 52 41 chr17 5010729 5011118 -80427362 - L1ME2 LINE L1 -20 6144 5755 2108 114 3 0 chr17 5011414 5011721 -80426759 - AluSx SINE Alu -1 311 4 315 275 75 6 chr17 5011722 5011882 -80426598 - L1ME LINE L1 -677 5444 5274 1612 100 118 42 chr17 5012130 5012460 -80426020 - L1MB3 LINE L1 -1 6182 5828 1352 124 9 14 chr17 5012460 5012670 -80425810 - AluSg/x SINE Alu -13 297 89 2246 75 3 3 chr17 5012670 5012965 -80425515 + AluSx SINE Alu 6 300 -12 283 168 158 42 chr17 5012965 5013060 -80425420 - L1MB3 LINE L1 -372 5799 5694 26 50 0 0 chr17 5014384 5014424 -80424056 + AT_rich Low_complexity Low_complexity 1 40 0 872 115 0 23 chr17 5014424 5014554 -80423926 - FLAM_C SINE Alu -16 127 1 225 146 0 0 chr17 5014555 5014603 -80423877 + (T)n Simple_repeat Simple_repeat 1 48 0 234 209 0 0 chr17 5016539 5016582 -80421898 + L2 LINE L2 2715 2757 -557 260 246 146 27 chr17 5016835 5016945 -80421535 - LTR11 LTR ERV -217 467 345 388 246 153 16 chr17 5017478 5017661 -80420819 + Charlie8 DNA MER1_type 35 242 -2175 213 193 0 136 chr17 5018516 5018604 -80419876 + MIR SINE MIR 116 191 -71 2355 60 3 10 chr17 5018733 5019047 -80419433 + AluSp SINE Alu 1 312 -1 2312 142 28 73 chr17 5020296 5020805 -80417675 - LTR19A LTR ERV1 0 486 1 3068 63 8 0 chr17 5020805 5021184 -80417296 - LTR19A-int LTR ERV1 0 5586 5205 3106 124 0 0 chr17 5021211 5021662 -80416818 - PABL_A-int LTR ERV1 -2039 2976 2526 1424 182 113 31 chr17 5021809 5022128 -80416352 - MER47A DNA MER2_type -2 364 20 881 195 32 45 chr17 5022556 5022777 -80415703 + MER46A DNA MER2_type 2 219 -17 198 328 166 20 chr17 5022777 5023030 -80415450 - L2 LINE L2 -2127 1187 898 207 323 168 19 chr17 5023106 5023267 -80415213 - L2 LINE L2 -16 3297 3113 636 269 29 43 chr17 5023546 5023825 -80414655 - L1ME LINE L1 -369 5752 5478 1689 171 20 0 chr17 5023872 5024170 -80414310 - AluJb SINE Alu -8 304 1 1715 150 17 3 chr17 5024178 5024472 -80414008 - AluJo SINE Alu -1 311 14 2018 96 17 14 chr17 5025134 5025426 -80413054 - AluSg SINE Alu -17 293 1 441 261 14 70 chr17 5025520 5025662 -80412818 + L2 LINE L2 3139 3272 0 2409 76 0 0 chr17 5025984 5026287 -80412193 + AluSx SINE Alu 1 303 -9 1469 92 0 5 chr17 5026375 5026581 -80411899 + AluSx SINE Alu 1 205 -107 2029 76 42 21 chr17 5026602 5026890 -80411590 - AluY SINE Alu -15 296 3 2277 95 0 0 chr17 5027417 5027723 -80410757 + AluSx SINE Alu 1 306 -6 254 219 67 92 chr17 5027859 5027910 -80410570 + MER112 DNA MER1_type 1 52 -208 2313 81 0 0 chr17 5027910 5028208 -80410272 + AluY SINE Alu 1 298 -13 254 219 67 92 chr17 5028208 5028275 -80410205 + MER112 DNA MER1_type 52 116 -144 872 138 7 22 chr17 5028277 5028415 -80410065 + AluJo SINE Alu 1 136 -176 1716 152 24 7 chr17 5028494 5028784 -80409696 + AluJo SINE Alu 1 295 -17 24 32 0 0 chr17 5028986 5029017 -80409463 + AT_rich Low_complexity Low_complexity 1 31 0 1646 174 3 7 chr17 5029021 5029308 -80409172 - AluJo SINE Alu -26 286 1 249 285 78 66 chr17 5029311 5029553 -80408927 - HAL1 LINE L1 0 2507 2263 617 230 0 0 chr17 5029631 5029757 -80408723 - FLAM_A SINE Alu -7 126 1 270 279 23 76 chr17 5029892 5030064 -80408416 - HAL1 LINE L1 -543 1964 1802 300 261 33 11 chr17 5030084 5030176 -80408304 - HAL1 LINE L1 -2090 417 324 37 81 0 0 chr17 5030502 5030588 -80407892 + AT_rich Low_complexity Low_complexity 1 86 0 1783 141 57 0 chr17 5030600 5030883 -80407597 - AluSx SINE Alu -13 299 1 2068 78 0 4 chr17 5030897 5031167 -80407313 - AluSx SINE Alu -11 301 33 333 115 0 0 chr17 5031618 5031679 -80406801 - AluJo SINE Alu -1 301 241 927 189 0 22 chr17 5031679 5031859 -80406621 - AluJo SINE Alu -136 176 1 430 276 104 27 chr17 5032515 5032736 -80405744 - MIR SINE MIR -12 250 13 443 231 56 0 chr17 5033846 5033954 -80404526 - MER81 DNA DNA 0 114 1 815 140 70 0 chr17 5034827 5034970 -80403510 - FAM SINE Alu -21 164 12 211 37 0 0 chr17 5035476 5035503 -80402977 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 881 151 0 7 chr17 5035503 5035649 -80402831 - AluJb SINE Alu -1 310 140 2175 102 3 3 chr17 5035662 5035966 -80402514 - AluSx SINE Alu -8 304 1 297 252 26 52 chr17 5036300 5036415 -80402065 - L1ME LINE L1 -309 5855 5744 2037 120 3 0 chr17 5036819 5037111 -80401369 + AluSx SINE Alu 1 293 -19 362 267 17 97 chr17 5038320 5038487 -80399993 - MIR SINE MIR -19 243 89 2070 120 0 16 chr17 5038487 5038795 -80399685 + AluSx SINE Alu 1 303 -9 343 226 88 38 chr17 5038810 5038969 -80399511 - L1ME LINE L1 -770 5376 5210 657 192 146 0 chr17 5039141 5039271 -80399209 + FRAM SINE Alu 1 146 -30 21 82 0 0 chr17 5039603 5039652 -80398828 + AT_rich Low_complexity Low_complexity 1 49 0 446 214 65 54 chr17 5039730 5039898 -80398582 - L1ME4a LINE L1 0 6121 5952 2104 84 0 52 chr17 5039996 5040327 -80398153 - AluSx SINE Alu 0 315 1 1845 80 109 11 chr17 5040576 5040851 -80397629 - AluSc SINE Alu -7 302 1 1017 83 0 0 chr17 5040855 5040988 -80397492 - AluSq/x SINE Alu -180 133 1 227 247 86 37 chr17 5041593 5041674 -80396806 - MIR SINE MIR 0 262 178 539 246 16 0 chr17 5041720 5041842 -80396638 - MIR SINE MIR -77 185 62 215 265 0 0 chr17 5041878 5041927 -80396553 - L2 LINE L2 -227 3045 2997 1780 158 0 17 chr17 5041945 5042242 -80396238 + AluSx SINE Alu 1 292 -20 2346 87 0 0 chr17 5042845 5043154 -80395326 + AluSx SINE Alu 1 309 -3 414 273 77 28 chr17 5044240 5044383 -80394097 + MIR SINE MIR 77 226 -36 298 149 15 90 chr17 5045106 5045173 -80393307 - U7 snRNA snRNA -1 62 1 187 211 225 0 chr17 5045263 5045334 -80393146 + MIR3 SINE MIR 107 193 -15 225 0 0 0 chr17 5045948 5045973 -80392507 + (A)n Simple_repeat Simple_repeat 1 25 0 518 48 0 0 chr17 5045983 5046046 -80392434 + AluS SINE Alu 2 64 -248 1758 140 24 10 chr17 5046046 5046338 -80392142 + AluSx SINE Alu 16 311 -1 1191 191 108 0 chr17 5047476 5047717 -80390763 - MER21B LTR ERV1 -305 558 292 2959 147 75 10 chr17 5047988 5048506 -80389974 - MER21A LTR ERV1 -2 929 378 1639 103 63 16 chr17 5048513 5048765 -80389715 - MER21A LTR ERV1 -667 264 1 1591 126 89 0 chr17 5050615 5050886 -80387594 + AluSg SINE Alu 3 297 -13 1097 211 50 18 chr17 5050927 5051206 -80387274 - L1MB7 LINE L1 0 6184 5897 1855 92 42 0 chr17 5051220 5051482 -80386998 - AluSg SINE Alu -33 277 5 931 177 61 140 chr17 5051486 5051865 -80386615 - L1MB7 LINE L1 -838 5308 4960 2160 76 0 57 chr17 5052159 5052476 -80386004 - AluSc SINE Alu -10 299 1 2369 59 0 0 chr17 5053470 5053759 -80384721 + AluSc SINE Alu 13 301 -8 252 301 92 46 chr17 5054097 5054270 -80384210 - MIR3 SINE MIR -7 201 21 869 85 78 0 chr17 5056222 5056351 -80382129 + MER85 DNA T2_type 1 139 0 1814 155 7 0 chr17 5056723 5057019 -80381461 - AluSx SINE Alu -14 298 1 2179 112 0 6 chr17 5057728 5058041 -80380439 - AluSq SINE Alu -2 311 1 2148 101 0 0 chr17 5058051 5058338 -80380142 - AluSx SINE Alu -25 287 1 208 240 73 62 chr17 5058455 5058551 -80379929 - L2 LINE L2 -316 2956 2860 384 282 26 34 chr17 5058665 5058782 -80379698 + MIR3 SINE MIR 15 130 -78 189 171 0 0 chr17 5059435 5059470 -80379010 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2252 94 0 0 chr17 5060793 5061090 -80377390 + AluSx SINE Alu 6 302 -10 2212 89 0 10 chr17 5061282 5061584 -80376896 + AluSg SINE Alu 1 299 -11 723 218 0 0 chr17 5061720 5061844 -80376636 + MER63A DNA MER1_type 50 173 -37 2139 96 7 7 chr17 5062588 5062891 -80375589 + AluSx SINE Alu 1 303 -9 253 234 252 47 chr17 5062963 5063070 -80375410 - L2 LINE L2 -2 3270 3142 811 219 14 0 chr17 5063083 5063229 -80375251 + MER58B DNA MER1_type 194 341 0 607 295 163 18 chr17 5063443 5063670 -80374810 - MIR SINE MIR -2 260 1 386 305 114 0 chr17 5063658 5063789 -80374691 - MIR SINE MIR 0 262 117 * 819 170 7 27 chr17 5063794 5063941 -80374539 + AluJ SINE Alu 2 145 -167 1718 166 0 17 chr17 5063943 5064245 -80374235 + AluJb SINE Alu 13 309 -3 22 0 0 0 chr17 5064277 5064299 -80374181 + AT_rich Low_complexity Low_complexity 1 22 0 1081 132 42 0 chr17 5064299 5064466 -80374014 + AluJ SINE Alu 129 302 -10 1527 170 22 58 chr17 5064683 5064994 -80373486 - AluJo SINE Alu 0 302 3 253 281 37 12 chr17 5065022 5065104 -80373376 + MIR SINE MIR 8 91 -171 361 335 64 6 chr17 5065721 5065894 -80372586 + MIR SINE MIR 80 262 0 347 306 116 16 chr17 5065965 5066086 -80372394 - MIR SINE MIR -58 150 18 1580 107 37 12 chr17 5066182 5066425 -80372055 + AluSx SINE Alu 47 295 -17 196 300 0 0 chr17 5066453 5066503 -80371977 + MER5A DNA MER1_type 81 130 -59 796 234 112 0 chr17 5067271 5067468 -80371012 + MER20 DNA MER1_type 1 219 0 269 253 72 24 chr17 5068212 5068295 -80370185 - L2 LINE L2 -953 2361 2275 262 303 64 9 chr17 5069096 5069205 -80369275 - L2 LINE L2 -176 3137 3023 2094 91 7 0 chr17 5069672 5069958 -80368522 + AluSx SINE Alu 1 288 -24 260 225 67 67 chr17 5070020 5070056 -80368424 + L2 LINE L2 3140 3175 -138 2174 91 7 13 chr17 5070056 5070364 -80368116 - AluSq SINE Alu -7 306 1 180 0 0 0 chr17 5070366 5070386 -80368094 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1832 142 0 0 chr17 5070386 5070667 -80367813 - AluSx SINE Alu -31 281 1 260 225 67 67 chr17 5070667 5070715 -80367765 + L2 LINE L2 3174 3228 -85 898 164 0 44 chr17 5070739 5070922 -80367558 - AluJb SINE Alu -13 299 125 1317 163 47 57 chr17 5071090 5071391 -80367089 + AluJb SINE Alu 2 299 -3 222 37 0 0 chr17 5072016 5072043 -80366437 + (TG)n Simple_repeat Simple_repeat 2 28 0 2346 95 0 0 chr17 5072057 5072361 -80366119 - AluSx SINE Alu -8 304 1 446 117 0 0 chr17 5072429 5072489 -80365991 - Tigger5 DNA MER2_type 0 2323 2264 323 182 0 0 chr17 5072511 5072566 -80365914 + Tigger5 DNA MER2_type 1 55 -2268 248 86 224 52 chr17 5072535 5072593 -80365887 + Tigger5 DNA MER2_type 2251 2318 -5 * 309 289 51 64 chr17 5072669 5072825 -80365655 + MIR SINE MIR 59 212 -50 1859 146 3 3 chr17 5072904 5073206 -80365274 + AluSx SINE Alu 1 302 -10 39 0 0 0 chr17 5073206 5073245 -80365235 + AT_rich Low_complexity Low_complexity 1 39 0 590 100 0 0 chr17 5073245 5073325 -80365155 - AluSg/x SINE Alu -18 294 215 1697 129 19 0 chr17 5073328 5073584 -80364896 - AluSx SINE Alu -51 261 1 2084 102 3 3 chr17 5073729 5074023 -80364457 + AluSp SINE Alu 1 294 -19 336 330 40 17 chr17 5074512 5074688 -80363792 + MIR3 SINE MIR 20 199 -9 1178 164 45 0 chr17 5074952 5075153 -80363327 + AluJb SINE Alu 1 210 -102 444 167 0 83 chr17 5075691 5075787 -80362693 - Tigger7 DNA MER2_type -11 2476 2389 310 98 0 0 chr17 5075785 5075826 -80362654 - Tigger7 DNA MER2_type -284 266 226 * 2240 88 0 52 chr17 5076613 5076942 -80361538 - AluSx SINE Alu 0 312 1 209 364 53 30 chr17 5076953 5077085 -80361395 - L2 LINE L2 -5 3267 3133 753 117 8 17 chr17 5077646 5077766 -80360714 - AluJb SINE Alu -183 129 11 1033 273 145 26 chr17 5078055 5078640 -80359840 + L2 LINE L2 2661 3304 -9 486 278 88 78 chr17 5078647 5078827 -80359653 - L1ME4a LINE L1 -95 6026 5840 2480 69 0 0 chr17 5078827 5079132 -80359348 - AluSq SINE Alu -8 305 1 486 278 88 78 chr17 5079132 5079257 -80359223 - L1ME4a LINE L1 -281 5840 5718 185 330 11 78 chr17 5079780 5079959 -80358521 - L2 LINE L2 -76 3196 3030 1191 106 156 0 chr17 5081331 5081435 -80357045 - MER30 DNA MER1_type 0 230 144 195 42 0 0 chr17 5081435 5081459 -80357021 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1191 106 156 0 chr17 5081459 5081553 -80356927 - MER30 DNA MER1_type -86 144 1 302 319 173 34 chr17 5082180 5082594 -80355886 - L2 LINE L2 -1010 2304 1822 917 164 41 55 chr17 5082594 5082813 -80355667 - MER20 DNA MER1_type -1 218 3 302 319 173 34 chr17 5082813 5082843 -80355637 - L2 LINE L2 -1492 1822 1798 192 304 139 13 chr17 5083167 5083246 -80355234 + L2 LINE L2 3166 3254 -18 2208 105 0 3 chr17 5083579 5083893 -80354587 - AluSq SINE Alu 0 313 1 1066 145 17 138 chr17 5084376 5084541 -80353939 + L1MA5 LINE L1 5601 5784 -519 1685 136 3 48 chr17 5084541 5084720 -80353760 - AluSx SINE Alu 0 305 144 2144 108 0 3 chr17 5084720 5085027 -80353453 - AluSg SINE Alu -3 307 2 1685 136 3 48 chr17 5085027 5085165 -80353315 - AluSx SINE Alu -161 144 1 1066 145 17 138 chr17 5085165 5085233 -80353247 + L1MA5 LINE L1 5784 5796 -507 1501 182 52 0 chr17 5085233 5085502 -80352978 - AluJb SINE Alu -19 283 1 1066 145 17 138 chr17 5085502 5085556 -80352924 + L1MA5 LINE L1 5796 5855 -448 186 194 76 6 chr17 5085728 5085799 -80352681 - MIR SINE MIR -31 177 100 2064 121 33 10 chr17 5085884 5086189 -80352291 - AluSp SINE Alu -1 312 1 2321 88 7 0 chr17 5086825 5087122 -80351358 - AluSp SINE Alu -14 299 1 30 0 0 0 chr17 5087128 5087158 -80351322 + AT_rich Low_complexity Low_complexity 1 30 0 2423 76 10 0 chr17 5087706 5088007 -80350473 - AluSg SINE Alu -6 304 1 576 169 127 28 chr17 5088030 5088172 -80350308 + Tigger1 DNA MER2_type 2 157 -2261 * 1096 158 32 50 chr17 5088161 5088382 -80350098 + Tigger1 DNA MER2_type 2202 2418 0 466 226 101 32 chr17 5088709 5088989 -80349491 + L1MB8 LINE L1 3120 3438 -2708 180 0 0 0 chr17 5089013 5089033 -80349447 + (A)n Simple_repeat Simple_repeat 1 20 0 2495 63 0 10 chr17 5089033 5089333 -80349147 + AluY SINE Alu 1 297 -14 2275 84 7 17 chr17 5089333 5089629 -80348851 + AluSc SINE Alu 1 293 -16 2213 103 3 7 chr17 5089633 5089934 -80348546 + AluSx SINE Alu 1 300 -12 1959 121 32 38 chr17 5090021 5090335 -80348145 + AluSx SINE Alu 1 312 0 480 199 14 55 chr17 5090362 5090508 -80347972 + L1MB8 LINE L1 3916 4055 -2091 1307 224 116 14 chr17 5090513 5090866 -80347614 - MLT1D LTR MaLR -2 503 115 1836 157 0 14 chr17 5090873 5091166 -80347314 - AluJb SINE Alu -23 289 1 382 198 124 8 chr17 5091166 5091287 -80347193 + L1MB8 LINE L1 5149 5283 -863 3615 162 51 48 chr17 5091305 5092003 -80346477 + L1MB8 LINE L1 5365 6067 -111 2228 106 0 3 chr17 5092003 5092296 -80346184 - AluSq SINE Alu -21 292 1 3615 162 51 48 chr17 5092296 5092404 -80346076 + L1MB8 LINE L1 6067 6173 -5 1875 127 46 3 chr17 5092406 5092689 -80345791 + AluSx SINE Alu 1 295 -17 1147 143 16 108 chr17 5092697 5092955 -80345525 + MER46A DNA MER2_type 2 235 -1 419 324 66 28 chr17 5093486 5093548 -80344932 + L2 LINE L2 2908 2966 -306 225 0 0 0 chr17 5093548 5093573 -80344907 + (CCCCAG)n Simple_repeat Simple_repeat 1 25 0 419 324 66 28 chr17 5093573 5093797 -80344683 + L2 LINE L2 2966 3205 -67 758 296 76 29 chr17 5093807 5094296 -80344184 + L2 LINE L2 1967 2478 -836 2211 122 0 3 chr17 5094490 5094793 -80343687 + AluSg SINE Alu 3 304 -6 1770 148 17 44 chr17 5094828 5094969 -80343511 + AluJb SINE Alu 1 144 -168 2274 90 3 17 chr17 5094969 5095268 -80343212 + AluSg SINE Alu 1 295 -15 1770 148 17 44 chr17 5095268 5095423 -80343057 + AluJb SINE Alu 144 289 -23 283 179 73 113 chr17 5095510 5095661 -80342819 + L1ME3 LINE L1 5940 6084 -78 372 282 77 45 chr17 5096948 5097202 -80341278 - MIR SINE MIR -4 258 1 1498 142 120 29 chr17 5097249 5097524 -80340956 + AluJo SINE Alu 1 300 -12 2376 87 7 0 chr17 5098042 5098340 -80340140 - AluSx SINE Alu -12 300 1 2341 103 7 0 chr17 5098428 5098728 -80339752 - AluSx SINE Alu -10 302 1 241 233 35 47 chr17 5099050 5099136 -80339344 + MARNA DNA Mariner 426 510 -76 2074 106 11 11 chr17 5099636 5099919 -80338561 + AluY SINE Alu 1 283 -28 2245 110 0 7 chr17 5099923 5100231 -80338249 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr17 5105232 5105255 -80333225 + AT_rich Low_complexity Low_complexity 1 23 0 943 144 0 60 chr17 5105284 5105451 -80333029 - AluSq SINE Alu -21 292 136 2084 137 0 10 chr17 5105458 5105757 -80332723 - AluSx SINE Alu -16 296 1 2291 108 0 0 chr17 5105844 5106140 -80332340 + AluSx SINE Alu 3 298 -14 263 313 0 0 chr17 5108115 5108179 -80330301 - L2 LINE L2 -189 3083 3020 214 272 72 24 chr17 5108731 5108856 -80329624 - L2 LINE L2 -1552 1762 1632 2350 79 10 7 chr17 5110398 5110703 -80327777 + AluSp SINE Alu 1 306 -7 203 299 52 13 chr17 5111543 5111620 -80326860 - L2 LINE L2 0 3272 3193 891 175 6 47 chr17 5111878 5112049 -80326431 - FRAM SINE Alu -2 164 1 1544 128 128 12 chr17 5112085 5112361 -80326119 + AluSg SINE Alu 4 308 0 1574 154 0 55 chr17 5112502 5112814 -80325666 - AluJb SINE Alu -17 295 1 189 107 0 0 chr17 5113100 5113128 -80325352 + (A)n Simple_repeat Simple_repeat 1 28 0 2075 96 0 77 chr17 5113147 5113282 -80325198 + AluSx SINE Alu 1 145 -167 2120 113 3 28 chr17 5113282 5113600 -80324880 + AluSg SINE Alu 1 310 0 2075 96 0 77 chr17 5113600 5113788 -80324692 + AluSx SINE Alu 145 299 -13 1549 133 12 8 chr17 5113910 5114151 -80324329 + AluSx SINE Alu 55 296 -16 826 189 47 11 chr17 5114294 5114484 -80323996 + L1MB8 LINE L1 5842 6038 -140 432 0 0 0 chr17 5114486 5114534 -80323946 + (TG)n Simple_repeat Simple_repeat 2 49 0 755 161 35 0 chr17 5114558 5114701 -80323779 + L1MB7 LINE L1 6027 6174 -10 1870 134 13 17 chr17 5115170 5115468 -80323012 + AluSx SINE Alu 1 297 -15 2135 58 0 12 chr17 5115862 5116121 -80322359 - AluY SINE Alu -55 256 1 807 228 55 81 chr17 5116152 5116213 -80322267 - L1M4 LINE L1 -1455 4691 4630 1917 102 12 0 chr17 5116213 5116469 -80322011 + AluSp SINE Alu 37 295 -18 807 228 55 81 chr17 5116469 5116633 -80321847 - L1M4 LINE L1 -1516 4630 4463 2461 86 0 0 chr17 5116633 5116937 -80321543 - AluSc SINE Alu -4 305 2 2539 85 0 0 chr17 5116939 5117246 -80321234 - AluSq SINE Alu -6 307 1 807 228 55 81 chr17 5117246 5117363 -80321117 - L1M4 LINE L1 -1684 4462 4354 2513 64 0 0 chr17 5117363 5117659 -80320821 - AluY SINE Alu -15 296 1 1318 181 0 0 chr17 5117668 5117873 -80320607 - AluJb SINE Alu -23 289 85 2251 92 0 7 chr17 5117886 5118192 -80320288 - AluSx SINE Alu -8 304 1 2327 232 6 40 chr17 5118192 5118722 -80319758 - L1M4 LINE L1 -5697 845 334 500 239 26 0 chr17 5118726 5118843 -80319637 + L1M4 LINE L1 581 700 -5842 1001 133 0 0 chr17 5118868 5119018 -80319462 - AluSg/x SINE Alu -1 311 162 505 17 0 0 chr17 5119018 5119078 -80319402 - AluSp/q SINE Alu -16 297 238 1832 109 7 51 chr17 5119092 5119385 -80319095 - AluSx SINE Alu -32 280 1 1975 128 14 0 chr17 5119396 5119677 -80318803 - AluSx SINE Alu -7 305 21 888 182 50 0 chr17 5119761 5119917 -80318563 - MER20 DNA MER1_type -1 218 55 407 138 0 0 chr17 5119917 5119975 -80318505 + AluS SINE Alu 1 58 -250 180 0 0 0 chr17 5119991 5120011 -80318469 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2506 65 0 7 chr17 5120012 5120319 -80318161 + AluY SINE Alu 1 305 -6 255 241 37 19 chr17 5120407 5120515 -80317965 + L1MC4 LINE L1 7932 8041 -1 905 278 229 50 chr17 5120564 5121036 -80317444 - L2 LINE L2 -1108 2206 1820 1605 164 114 0 chr17 5121036 5121316 -80317164 - AluJb SINE Alu 0 312 1 905 278 229 50 chr17 5121316 5121373 -80317107 - L2 LINE L2 -1494 1820 1775 2103 107 14 7 chr17 5121373 5121662 -80316818 + AluSg SINE Alu 1 291 -19 905 278 229 50 chr17 5121662 5122052 -80316428 - L2 LINE L2 -1539 1775 1121 1954 100 0 0 chr17 5122116 5122367 -80316113 - AluSg SINE Alu -6 304 54 754 292 104 39 chr17 5122441 5122797 -80315683 + LTR67 LTR ERVL 101 479 -78 2648 52 0 0 chr17 5122954 5123260 -80315220 - AluY SINE Alu -5 306 1 1657 181 56 3 chr17 5123504 5123792 -80314688 - AluJb SINE Alu -9 303 1 2273 92 27 0 chr17 5124656 5124949 -80313531 - AluSx SINE Alu -11 301 1 1068 219 75 67 chr17 5125319 5125373 -80313107 + Charlie7 DNA MER1_type 284 336 -2276 2443 75 0 0 chr17 5125373 5125668 -80312812 - AluY SINE Alu -16 295 1 2251 85 0 7 chr17 5125671 5125987 -80312493 - AluSg SINE Alu 0 314 1 1068 219 75 67 chr17 5125987 5126329 -80312151 + Charlie7 DNA MER1_type 337 688 -1924 1105 76 0 0 chr17 5126589 5126720 -80311760 - AluSg SINE Alu -179 131 1 425 287 21 122 chr17 5126941 5127227 -80311253 - L2 LINE L2 -20 3252 2996 862 234 172 39 chr17 5127346 5127619 -80310861 + L1MC4a LINE L1 5905 6140 -1668 2531 62 0 0 chr17 5127619 5127927 -80310553 + AluY SINE Alu 3 310 -1 862 234 172 39 chr17 5127927 5128118 -80310362 + L1MC4a LINE L1 6140 6431 -1377 968 262 121 32 chr17 5128120 5128623 -80309857 + L1MC4 LINE L1 7353 7900 -142 206 167 0 24 chr17 5128634 5128676 -80309804 + (CATA)n Simple_repeat Simple_repeat 4 44 0 2395 91 7 0 chr17 5128884 5129191 -80309289 + AluSp SINE Alu 1 309 -4 1851 103 0 8 chr17 5129759 5130012 -80308468 - AluSg SINE Alu -15 295 45 2148 97 7 29 chr17 5130826 5131135 -80307345 + AluSq SINE Alu 1 302 -11 2185 73 4 4 chr17 5131314 5131586 -80306894 + AluSg SINE Alu 1 272 -38 243 0 0 0 chr17 5131611 5131638 -80306842 + (TG)n Simple_repeat Simple_repeat 2 28 0 1986 131 31 0 chr17 5131822 5132112 -80306368 + AluSx SINE Alu 1 299 -13 2340 222 100 39 chr17 5132168 5133020 -80305460 + L1ME3A LINE L1 5267 6170 0 25 0 0 0 chr17 5133476 5133501 -80304979 + AT_rich Low_complexity Low_complexity 1 25 0 1945 79 86 11 chr17 5133829 5134109 -80304371 - AluSx SINE Alu -11 301 1 2092 124 10 0 chr17 5135041 5135348 -80303132 + AluSg SINE Alu 1 310 0 258 298 46 14 chr17 5136172 5136318 -80302162 + MIR SINE MIR 65 212 -50 307 370 58 23 chr17 5137476 5137649 -80300831 - L2 LINE L2 -4 3268 3090 325 324 171 11 chr17 5137692 5137967 -80300513 - L2 LINE L2 -929 2385 2067 2390 61 0 0 chr17 5137985 5138280 -80300200 - AluY SINE Alu -16 295 1 1292 196 116 7 chr17 5138329 5138605 -80299875 + L1MB5 LINE L1 5868 6173 -1 2486 67 0 3 chr17 5139187 5139487 -80298993 + AluY SINE Alu 1 299 -12 1934 134 0 20 chr17 5139499 5139805 -80298675 + AluJo SINE Alu 1 300 -12 1600 168 14 3 chr17 5139872 5140158 -80298322 - AluSx SINE Alu -10 302 14 21 0 0 0 chr17 5140195 5140216 -80298264 + AT_rich Low_complexity Low_complexity 1 21 0 1224 196 42 45 chr17 5140325 5140678 -80297802 + MER74A LTR ERVL 144 495 -63 2005 129 10 0 chr17 5140732 5141026 -80297454 + AluSx SINE Alu 1 297 -15 389 251 53 37 chr17 5141039 5141226 -80297254 + L1ME4a LINE L1 5753 5942 -179 2275 88 7 10 chr17 5141227 5141521 -80296959 + AluSg SINE Alu 1 293 -17 1415 108 47 9 chr17 5141544 5141757 -80296723 + AluJb SINE Alu 85 305 -7 407 216 88 24 chr17 5141801 5141926 -80296554 + L1ME4a LINE L1 5962 6094 -27 1253 157 10 10 chr17 5142048 5142245 -80296235 - AluSg/x SINE Alu -29 283 87 405 316 37 18 chr17 5143167 5143385 -80295095 - L2 LINE L2 -497 2817 2596 1704 171 10 14 chr17 5144409 5144701 -80293779 - AluJb SINE Alu -21 291 1 831 171 0 0 chr17 5144704 5144833 -80293647 - AluJo/FLAM SINE Alu -179 133 5 190 310 120 80 chr17 5144977 5145303 -80293177 - L2 LINE L2 -114 3158 2820 355 187 60 84 chr17 5145346 5145512 -80292968 + MIR SINE MIR 92 253 -9 382 105 0 0 chr17 5145554 5145611 -80292869 - Alu SINE Alu -2 299 243 325 298 53 7 chr17 5145847 5145998 -80292482 + L1MB7 LINE L1 5633 5790 -331 1780 159 3 24 chr17 5146071 5146367 -80292113 - AluJb SINE Alu -22 290 1 28 61 0 0 chr17 5146558 5146607 -80291873 + AT_rich Low_complexity Low_complexity 1 49 0 1399 79 129 10 chr17 5146737 5146939 -80291541 + MER30 DNA MER1_type 5 230 0 2610 44 0 0 chr17 5147486 5147782 -80290698 - AluY SINE Alu -15 296 1 344 213 98 41 chr17 5148032 5148154 -80290326 + MER103 DNA DNA 36 164 -2 1769 158 21 0 chr17 5148718 5149009 -80289471 + L1MB7 LINE L1 5882 6178 -6 2341 84 7 7 chr17 5149020 5149329 -80289151 + AluY SINE Alu 1 309 -2 191 418 0 0 chr17 5149506 5149597 -80288883 + L2 LINE L2 2956 3046 -226 2282 92 3 7 chr17 5149602 5149894 -80288586 + AluSp SINE Alu 1 291 -22 2004 138 0 0 chr17 5150427 5150753 -80287727 - AluSx SINE Alu 0 326 1 29 28 0 0 chr17 5151208 5151244 -80287236 + AT_rich Low_complexity Low_complexity 1 36 0 307 339 40 23 chr17 5151344 5151521 -80286959 - L1MC/D LINE L1 -2233 5811 5632 853 183 0 0 chr17 5151679 5151816 -80286664 + FLAM_C SINE Alu 3 139 -4 235 245 75 66 chr17 5152759 5152865 -80285615 - L1M1 LINE L1 -846 5457 5351 1083 119 0 36 chr17 5152893 5153061 -80285419 - AluSg/x SINE Alu -5 307 146 2510 71 0 0 chr17 5153079 5153390 -80285090 - AluY SINE Alu 0 311 1 1758 149 67 0 chr17 5153439 5153707 -80284773 - AluSx SINE Alu -26 286 1 271 229 57 43 chr17 5153718 5153858 -80284622 - L1MC/D LINE L1 -872 5510 5369 516 154 13 0 chr17 5153959 5154037 -80284443 - AluJ/FLAM SINE Alu -232 80 2 2027 112 32 0 chr17 5154047 5154332 -80284148 - AluSx SINE Alu -18 294 1 377 263 124 84 chr17 5154341 5154703 -80283777 - L1MC/D LINE L1 -1234 5148 4802 1524 132 123 8 chr17 5154703 5154954 -80283526 - AluSg1 SINE Alu -29 280 1 377 263 124 84 chr17 5154954 5155317 -80283163 - L1MC/D LINE L1 -1580 4802 4394 348 287 120 62 chr17 5155539 5156024 -80282456 - L1MC/D LINE L1 -2328 4054 3542 807 188 48 12 chr17 5156024 5156189 -80282291 - AluJo SINE Alu -19 293 123 373 265 103 7 chr17 5156194 5156330 -80282150 - L1MC/D LINE L1 -2875 3507 3359 2477 83 0 3 chr17 5156331 5156645 -80281835 - AluSq SINE Alu 0 313 1 244 279 15 0 chr17 5156847 5156915 -80281565 - MIR SINE MIR -27 235 167 506 224 20 61 chr17 5156925 5157072 -80281408 - MIR SINE MIR -58 204 64 405 270 110 19 chr17 5157167 5157485 -80280995 - L1MC/D LINE L1 -3530 2852 2506 2257 95 0 16 chr17 5157488 5157792 -80280688 - AluSx SINE Alu -11 301 3 870 248 0 0 chr17 5157794 5157955 -80280525 - AluJb SINE Alu -23 289 129 319 274 142 20 chr17 5157966 5158139 -80280341 - L1MC/D LINE L1 -3885 2499 2296 1517 172 54 37 chr17 5158139 5158435 -80280045 - AluJo SINE Alu -11 301 1 319 274 142 20 chr17 5158435 5158465 -80280015 - L1MC/D LINE L1 -4088 2296 2271 2168 92 7 26 chr17 5158725 5159029 -80279451 - AluSp SINE Alu -14 299 2 2427 57 0 27 chr17 5159606 5159906 -80278574 - AluY SINE Alu -19 292 1 22 0 0 0 chr17 5159907 5159929 -80278551 + AT_rich Low_complexity Low_complexity 1 22 0 1834 156 16 13 chr17 5160689 5161046 -80277434 + L1MC3 LINE L1 7450 7983 -12 205 305 95 48 chr17 5161415 5161520 -80276960 - L2 LINE L2 -3 3310 3201 452 223 31 136 chr17 5161525 5161812 -80276668 - L2 LINE L2 -78 3235 2979 446 299 162 5 chr17 5162272 5162476 -80276004 - MIR SINE MIR -21 241 6 1310 151 56 119 chr17 5162642 5162779 -80275701 + AluSx SINE Alu 1 145 -167 2372 90 0 0 chr17 5162779 5163078 -80275402 + AluSx SINE Alu 2 300 -12 1310 151 56 119 chr17 5163078 5163259 -80275221 + AluSx SINE Alu 145 299 -13 281 285 103 23 chr17 5163266 5163447 -80275033 + MLT1J LTR MaLR 2 159 -287 466 300 42 29 chr17 5163463 5163705 -80274775 + MLT1J LTR MaLR 305 499 -12 2348 90 0 0 chr17 5163848 5164147 -80274333 + AluY SINE Alu 1 299 -12 2263 86 3 35 chr17 5164400 5164713 -80273767 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr17 5165434 5165455 -80273025 + AT_rich Low_complexity Low_complexity 1 21 0 511 254 163 14 chr17 5165542 5165751 -80272729 + MIR SINE MIR 13 252 -10 383 266 152 15 chr17 5165938 5166255 -80272225 - L1M3 LINE L1 -748 5398 5195 243 0 0 0 chr17 5166255 5166282 -80272198 + (A)n Simple_repeat Simple_repeat 1 27 0 1836 153 3 3 chr17 5166287 5166569 -80271911 - AluJo SINE Alu -30 282 1 300 330 102 0 chr17 5166660 5166778 -80271702 + MIR3 SINE MIR 4 133 -75 329 123 15 0 chr17 5167464 5167529 -80270951 + (TA)n Simple_repeat Simple_repeat 1 66 0 382 242 80 93 chr17 5167669 5167767 -80270713 - L1MC5 LINE L1 -49 7912 7814 2305 78 3 3 chr17 5167767 5168061 -80270419 - AluSq SINE Alu -19 294 1 382 242 80 93 chr17 5168061 5168350 -80270130 - L1MC5 LINE L1 -147 7814 7530 2096 75 65 0 chr17 5168360 5168639 -80269841 - AluSg SINE Alu -13 297 1 2023 159 0 3 chr17 5168639 5168947 -80269533 - AluJb SINE Alu -4 308 1 593 252 22 0 chr17 5169761 5169896 -80268584 + Tigger3(Golem) DNA MER2_type 2 139 -2890 2404 95 0 13 chr17 5169928 5170244 -80268236 - AluSx SINE Alu 0 312 1 1355 170 33 8 chr17 5170244 5170485 -80267995 + Tigger3(Golem) DNA MER2_type 2783 3029 0 4688 179 33 7 chr17 5170496 5171352 -80267128 - L1MC1 LINE L1 0 6333 5456 469 206 37 0 chr17 5171359 5171466 -80267014 - L1MC1 LINE L1 -941 5392 5282 * 1800 179 45 73 chr17 5171461 5171952 -80266528 - L1MA4 LINE L1 -1 7718 7242 1994 104 3 83 chr17 5171952 5172278 -80266202 - AluSq SINE Alu -12 301 2 6512 154 59 126 chr17 5172278 5174185 -80264295 - L1MA4 LINE L1 -638 7085 5327 2099 138 3 3 chr17 5174185 5174497 -80263983 - AluSx SINE Alu 0 312 1 6512 154 59 126 chr17 5174497 5174673 -80263807 - L1MA4 LINE L1 -2396 5327 5141 4768 208 50 45 chr17 5174678 5174915 -80263565 - L1MA4 LINE L1 -3528 4037 3803 1364 164 56 72 chr17 5174915 5175081 -80263399 - AluJo SINE Alu -12 300 140 2211 99 0 3 chr17 5175081 5175373 -80263107 - AluSq SINE Alu -22 291 1 1364 164 56 72 chr17 5175373 5175511 -80262969 - AluJo SINE Alu -172 140 1 4768 208 50 45 chr17 5175511 5175673 -80262807 - L1MA4 LINE L1 -3762 3803 3643 1775 163 10 10 chr17 5175673 5175829 -80262651 - AluJb SINE Alu -23 289 131 1992 149 0 3 chr17 5175829 5176130 -80262350 - AluJo SINE Alu -12 300 1 1775 163 10 10 chr17 5176130 5176262 -80262218 - AluJb SINE Alu -180 132 1 4768 208 50 45 chr17 5176262 5177628 -80260852 - L1MA4 LINE L1 -3922 3643 2254 2069 106 24 10 chr17 5177628 5177920 -80260560 + AluSx SINE Alu 1 296 -16 2245 101 10 3 chr17 5177933 5178241 -80260239 - AluSg SINE Alu 0 310 1 717 151 0 0 chr17 5178246 5178365 -80260115 - L1MA6 LINE L1 -5 6295 6177 1013 260 46 26 chr17 5178365 5178753 -80259727 - L1M4 LINE L1 -2284 3862 3490 239 132 0 0 chr17 5178887 5178925 -80259555 - L1MB8 LINE L1 0 6178 6141 3653 208 55 7 chr17 5178926 5179634 -80258846 - MER21B LTR ERV1 -86 777 36 204 40 0 0 chr17 5179639 5179664 -80258816 + (TA)n Simple_repeat Simple_repeat 1 25 0 2011 204 75 29 chr17 5179664 5180213 -80258267 - L1M4 LINE L1 -1960 4186 3613 997 169 0 11 chr17 5180213 5180391 -80258089 + AluSg/x SINE Alu 128 303 -9 2231 125 0 0 chr17 5180434 5180739 -80257741 - AluSx SINE Alu -7 305 1 2135 116 7 3 chr17 5180811 5181121 -80257359 - AluSx SINE Alu -1 311 1 472 269 133 50 chr17 5181169 5181416 -80257064 - HAL1 LINE L1 -856 1651 1426 2270 111 0 7 chr17 5181416 5181722 -80256758 - AluSx SINE Alu -8 304 1 472 269 133 50 chr17 5181722 5181932 -80256548 - HAL1 LINE L1 -1081 1426 1156 2538 57 0 0 chr17 5182474 5182771 -80255709 + AluY SINE Alu 1 297 -14 1693 104 0 0 chr17 5182830 5183060 -80255420 + AluSg/x SINE Alu 80 309 -1 2019 133 0 10 chr17 5184174 5184467 -80254013 - AluSx SINE Alu -22 290 1 2026 115 3 17 chr17 5184841 5185128 -80253352 + AluSx SINE Alu 1 283 -29 1437 217 64 31 chr17 5185156 5185571 -80252909 + Charlie2 DNA MER1_type 1854 2289 -573 2118 108 10 20 chr17 5185571 5185877 -80252603 - AluSg SINE Alu -7 303 1 1437 217 64 31 chr17 5185877 5185944 -80252536 + Charlie2 DNA MER1_type 2289 2352 -510 25 0 0 0 chr17 5186300 5186325 -80252155 + AT_rich Low_complexity Low_complexity 1 25 0 680 286 29 6 chr17 5186389 5186560 -80251920 + MER5A DNA MER1_type 1 175 -14 2267 90 0 0 chr17 5186566 5186855 -80251625 + AluSx SINE Alu 9 297 -15 443 276 91 22 chr17 5186897 5187060 -80251420 + Charlie2 DNA MER1_type 2509 2694 -168 1924 82 33 59 chr17 5187060 5187366 -80251114 + AluSg SINE Alu 1 298 -12 443 276 91 22 chr17 5187366 5187434 -80251046 + Charlie2 DNA MER1_type 2694 2756 -106 529 245 245 7 chr17 5187543 5187690 -80250790 + MER5A DNA MER1_type 7 188 -1 627 211 12 62 chr17 5187703 5187864 -80250616 - MER5A DNA MER1_type -36 153 1 2191 86 3 16 chr17 5187987 5188300 -80250180 - AluSp SINE Alu -4 309 1 255 256 23 35 chr17 5188388 5188474 -80250006 + L2 LINE L2 3229 3313 0 2360 77 0 0 chr17 5189142 5189440 -80249040 + AluSx SINE Alu 1 298 -14 2066 105 3 0 chr17 5190347 5190632 -80247848 - AluSx SINE Alu -26 286 1 225 204 74 0 chr17 5190701 5190755 -80247725 + Tigger5 DNA MER2_type 1 58 -2265 * 455 112 10 71 chr17 5190740 5190838 -80247642 + Tigger5 DNA MER2_type 2040 2131 -192 2208 95 0 0 chr17 5191029 5191323 -80247157 - AluSx SINE Alu -18 294 1 1023 152 92 0 chr17 5191431 5191615 -80246865 + Tigger5 DNA MER2_type 2121 2321 -2 2023 126 3 10 chr17 5193069 5193371 -80245109 - AluSq SINE Alu -13 300 1 2232 102 0 3 chr17 5193612 5193916 -80244564 - AluSq SINE Alu -9 304 2 1665 188 0 0 chr17 5194126 5194436 -80244044 + AluSx SINE Alu 1 310 0 1038 168 16 0 chr17 5194840 5195025 -80243455 + AluJo SINE Alu 1 188 -124 22 56 0 0 chr17 5195057 5195093 -80243387 + AT_rich Low_complexity Low_complexity 1 36 0 1944 138 0 0 chr17 5195127 5195424 -80243056 + AluSx SINE Alu 1 297 -15 470 323 81 44 chr17 5195516 5195860 -80242620 - L3 LINE CR1 -371 1206 850 180 345 0 0 chr17 5195921 5195979 -80242501 - L3 LINE CR1 -957 620 563 721 330 65 57 chr17 5196235 5196622 -80241858 + LTR67 LTR ERVL 36 429 -128 806 184 107 6 chr17 5196622 5196790 -80241690 + MER5A DNA MER1_type 2 186 -3 721 330 65 57 chr17 5196790 5196911 -80241569 + LTR67 LTR ERVL 429 548 -9 1570 180 80 43 chr17 5197096 5197469 -80241011 + L1MC3 LINE L1 7153 7539 -246 2232 97 0 0 chr17 5197641 5197949 -80240531 + AluSc SINE Alu 1 308 -1 915 166 137 66 chr17 5198297 5198508 -80239972 + L1MC5 LINE L1 6683 6908 -1053 298 182 268 71 chr17 5198566 5198714 -80239766 + L1MC5 LINE L1 7603 7721 -240 2465 50 0 0 chr17 5198714 5199012 -80239468 + AluY SINE Alu 1 298 -13 298 182 268 71 chr17 5199012 5199061 -80239419 + L1MC5 LINE L1 7721 7839 -122 474 189 277 14 chr17 5199825 5199973 -80238507 + MIR SINE MIR 5 191 -71 422 284 105 12 chr17 5200010 5200172 -80238308 - MIR SINE MIR -57 205 29 419 249 11 62 chr17 5200487 5200631 -80237849 + L1ME LINE L1 5627 5762 -359 1510 182 30 13 chr17 5200631 5200933 -80237547 + AluJb SINE Alu 1 307 -5 419 249 11 62 chr17 5200933 5200965 -80237515 + L1ME LINE L1 5762 5794 -327 454 300 65 39 chr17 5200991 5201108 -80237372 + L1ME LINE L1 3543 3655 -2491 2085 112 10 0 chr17 5201108 5201404 -80237076 + AluSp SINE Alu 1 299 -14 454 300 65 39 chr17 5201404 5201593 -80236887 + L1ME LINE L1 3655 3857 -2289 329 265 82 18 chr17 5201642 5201812 -80236668 + HAL1b LINE L1 76 256 -1092 239 248 114 78 chr17 5202039 5202265 -80236215 + L1ME LINE L1 5585 5826 -295 2014 115 0 23 chr17 5202265 5202569 -80235911 - AluSx SINE Alu -15 297 1 239 248 114 78 chr17 5202569 5202649 -80235831 + L1ME LINE L1 5826 5902 -219 999 143 0 0 chr17 5202792 5202953 -80235527 + MER2 DNA MER2_type 51 211 -134 1597 124 54 0 chr17 5202960 5203219 -80235261 - AluSg SINE Alu -1 309 37 355 234 0 0 chr17 5203223 5203287 -80235193 + MER2 DNA MER2_type 282 345 0 22 56 0 0 chr17 5203369 5203405 -80235075 + AT_rich Low_complexity Low_complexity 1 36 0 1382 171 89 0 chr17 5203664 5203933 -80234547 + AluJb SINE Alu 1 293 -19 1985 117 10 24 chr17 5204065 5204363 -80234117 - AluSp SINE Alu -19 294 1 1408 194 20 17 chr17 5204394 5204687 -80233793 + AluJb SINE Alu 6 299 -13 1895 139 17 0 chr17 5204687 5204989 -80233491 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr17 5205044 5205067 -80233413 + AT_rich Low_complexity Low_complexity 1 23 0 270 296 145 48 chr17 5205111 5205462 -80233018 + L1ME4a LINE L1 5412 5822 -299 1750 138 18 7 chr17 5205462 5205745 -80232735 - AluSx SINE Alu -26 286 1 270 296 145 48 chr17 5205745 5205870 -80232610 + L1ME4a LINE L1 5822 5934 -187 25 51 0 0 chr17 5205884 5205923 -80232557 + AT_rich Low_complexity Low_complexity 1 39 0 1959 122 0 10 chr17 5205947 5206241 -80232239 - AluSg SINE Alu -18 292 2 1338 200 3 10 chr17 5206486 5206776 -80231704 + AluSx SINE Alu 11 298 -14 2389 54 0 3 chr17 5206983 5207279 -80231201 + AluY SINE Alu 1 295 -16 552 210 22 29 chr17 5207654 5207792 -80230688 + LTR41 LTR ERVL 594 730 -43 310 247 134 16 chr17 5207936 5208152 -80230328 + L1P LINE L1 5118 5358 -788 194 91 30 0 chr17 5208176 5208209 -80230271 + GA-rich Low_complexity Low_complexity 3 36 0 196 148 0 37 chr17 5208234 5208288 -80230192 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 1888 143 0 7 chr17 5208367 5208674 -80229806 + AluSx SINE Alu 3 307 -5 2097 125 3 0 chr17 5208676 5208987 -80229493 + AluSx SINE Alu 1 312 0 201 316 0 0 chr17 5208991 5209048 -80229432 + L2 LINE L2 2718 2774 -540 196 311 33 0 chr17 5209143 5209204 -80229276 + L2 LINE L2 2995 3057 -215 1501 250 54 44 chr17 5209236 5209449 -80229031 + L2 LINE L2 2410 2619 -694 1751 144 28 11 chr17 5209449 5209733 -80228747 - AluJb SINE Alu -20 292 4 1501 250 54 44 chr17 5209733 5209747 -80228733 + L2 LINE L2 2619 2631 -682 2218 95 0 0 chr17 5209747 5210041 -80228439 - AluSx SINE Alu -5 307 14 1501 250 54 44 chr17 5210041 5210703 -80227777 + L2 LINE L2 2631 3309 -4 386 270 30 20 chr17 5210759 5210859 -80227621 + L2 LINE L2 3170 3270 -2 2176 97 0 0 chr17 5210867 5211157 -80227323 - AluSg SINE Alu -20 290 1 308 302 81 53 chr17 5211184 5211550 -80226930 + L1MC/D LINE L1 5466 5849 -321 592 274 47 16 chr17 5211573 5211763 -80226717 + MIR SINE MIR 37 232 -30 793 155 31 0 chr17 5211939 5212068 -80226412 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr17 5212377 5212399 -80226081 + AT_rich Low_complexity Low_complexity 1 22 0 1753 157 3 3 chr17 5212605 5212904 -80225576 + AluJb SINE Alu 1 299 -13 180 296 170 59 chr17 5214215 5214350 -80224130 - MIR3 SINE MIR -57 151 2 21 114 0 0 chr17 5214672 5214777 -80223703 + GC_rich Low_complexity Low_complexity 1 105 0 249 53 0 211 chr17 5215136 5215277 -80223203 + (GGGA)n Simple_repeat Simple_repeat 1 111 0 305 249 96 47 chr17 5215397 5215546 -80222934 + MIR3 SINE MIR 1 156 -65 201 238 313 0 chr17 5215632 5215712 -80222768 - L2 LINE L2 -4 3309 3205 2313 78 0 0 chr17 5215858 5216154 -80222326 - AluSg SINE Alu -14 296 1 250 278 0 0 chr17 5216254 5216308 -80222172 + MER115 DNA AcHobo 156 209 -484 2906 37 3 0 chr17 5216389 5216746 -80221734 + L1PA8 LINE L1 5817 6455 -14 2052 86 14 4 chr17 5216746 5217025 -80221455 + AluSg1 SINE Alu 1 282 -27 2906 37 3 0 chr17 5217025 5217041 -80221439 + L1PA8 LINE L1 6455 6469 0 1001 241 86 80 chr17 5217139 5217445 -80221035 + MER115 DNA AcHobo 304 614 -79 1989 125 3 13 chr17 5217445 5217756 -80220724 - AluSx SINE Alu 0 312 5 1001 241 86 80 chr17 5217756 5217835 -80220645 + MER115 DNA AcHobo 614 691 -2 1877 102 58 10 chr17 5218069 5218364 -80220116 + AluSx SINE Alu 1 309 -3 265 206 55 53 chr17 5218568 5218662 -80219818 + L1ME LINE L1 5606 5698 -423 275 272 87 0 chr17 5218736 5218828 -80219652 + L1ME LINE L1 5669 5768 -402 1164 90 0 0 chr17 5218850 5219005 -80219475 + AluY SINE Alu 139 293 -18 256 146 0 0 chr17 5219012 5219053 -80219427 + L1ME LINE L1 5788 5828 -342 2179 78 7 0 chr17 5219053 5219347 -80219133 + AluY SINE Alu 1 296 -15 560 306 151 39 chr17 5219369 5219860 -80218620 + L3 LINE CR1 967 1512 -65 2020 125 0 13 chr17 5219938 5220243 -80218237 + AluSx SINE Alu 1 301 -11 1224 125 0 0 chr17 5220900 5221076 -80217404 - AluSg/x SINE Alu -5 307 132 280 252 49 119 chr17 5221127 5221173 -80217307 + MIR SINE MIR 20 68 -194 2135 91 0 27 chr17 5221173 5221297 -80217183 + AluSx SINE Alu 11 137 -175 2144 87 0 14 chr17 5221297 5221613 -80216867 + AluY SINE Alu 1 312 0 2135 91 0 27 chr17 5221613 5221785 -80216695 + AluSx SINE Alu 137 300 -12 280 252 49 119 chr17 5221785 5221881 -80216599 + MIR SINE MIR 68 152 -110 2117 108 17 0 chr17 5222220 5222516 -80215964 - AluSx SINE Alu -11 301 1 198 0 0 0 chr17 5222539 5222561 -80215919 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2042 109 0 0 chr17 5222563 5222847 -80215633 - AluSx SINE Alu -28 284 1 386 224 66 3 chr17 5223949 5224088 -80214392 + MIR SINE MIR 45 191 -70 2282 57 0 0 chr17 5224229 5224511 -80213969 - AluSq SINE Alu -7 306 25 2129 112 0 0 chr17 5224853 5225149 -80213331 + AluSc SINE Alu 1 296 -13 1959 127 3 7 chr17 5225517 5225817 -80212663 + AluSx SINE Alu 6 304 -8 254 256 70 0 chr17 5226083 5226169 -80212311 + (CACTG)n Simple_repeat Simple_repeat 4 95 0 2167 198 24 67 chr17 5226402 5226450 -80212030 - LTR31 LTR ERV1 -17 602 553 2449 40 3 7 chr17 5226450 5226750 -80211730 - AluY SINE Alu -12 299 1 2167 198 24 67 chr17 5226750 5227136 -80211344 - LTR31 LTR ERV1 -66 553 194 2198 100 10 10 chr17 5227136 5227445 -80211035 - AluSq SINE Alu -4 309 1 2167 198 24 67 chr17 5227445 5227560 -80210920 - LTR31 LTR ERV1 -425 194 76 1609 161 39 7 chr17 5227568 5227727 -80210753 - AluJo SINE Alu -16 296 123 270 0 0 0 chr17 5227727 5227757 -80210723 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1609 161 39 7 chr17 5227757 5227882 -80210598 - AluJo SINE Alu -189 123 3 615 163 10 0 chr17 5228397 5228495 -80209985 + AluJ/FLAM SINE Alu 2 100 -212 674 173 17 12 chr17 5228533 5228706 -80209774 + GA-rich Low_complexity Low_complexity 5 178 0 2321 90 0 7 chr17 5228828 5229138 -80209342 + AluSx SINE Alu 2 309 -3 466 315 55 0 chr17 5229645 5229791 -80208689 - L2 LINE L2 -1 3312 3159 1701 179 0 3 chr17 5229860 5230156 -80208324 - AluJo SINE Alu -13 299 5 945 186 0 0 chr17 5230162 5230323 -80208157 - AluJb SINE Alu -16 296 136 2129 87 7 13 chr17 5230325 5230624 -80207856 - AluSg SINE Alu -9 301 5 805 93 0 0 chr17 5231009 5231116 -80207364 + AluSq/x SINE Alu 5 111 -202 948 208 16 0 chr17 5231134 5231195 -80207285 - AluJo SINE Alu -126 186 127 365 0 22 0 chr17 5231195 5231240 -80207240 + (TG)n Simple_repeat Simple_repeat 2 47 0 948 208 16 0 chr17 5231240 5231361 -80207119 - AluJo SINE Alu -185 127 1 2352 87 3 0 chr17 5231711 5232022 -80206458 + AluSx SINE Alu 1 312 0 2025 128 3 0 chr17 5232079 5232377 -80206103 - AluSx SINE Alu -13 299 1 786 262 50 57 chr17 5232649 5232931 -80205549 - MLT2F LTR ERVL -367 296 17 1221 192 28 0 chr17 5233034 5233289 -80205191 + L1MD3 LINE L1 7734 7995 0 927 85 4 2 chr17 5233473 5233730 -80204750 + AluSq SINE Alu 1 313 0 2173 105 0 13 chr17 5234459 5234772 -80203708 + AluSx SINE Alu 1 309 -3 182 342 0 51 chr17 5235545 5235624 -80202856 + L3b LINE CR1 1433 1507 -76 261 0 0 0 chr17 5235847 5235876 -80202604 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 369 62 0 0 chr17 5235875 5235923 -80202557 + (CA)n Simple_repeat Simple_repeat 1 48 0 385 323 37 25 chr17 5235932 5236093 -80202387 + MIR SINE MIR 97 259 -3 297 256 136 48 chr17 5236141 5236266 -80202214 - MIR SINE MIR -74 188 53 217 167 0 30 chr17 5236973 5237039 -80201441 + GA-rich Low_complexity Low_complexity 2 65 0 263 226 17 52 chr17 5237048 5237163 -80201317 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 531 273 14 7 chr17 5237245 5237384 -80201096 - MIR SINE MIR 0 262 123 748 258 220 18 chr17 5237590 5237931 -80200549 + L2 LINE L2 2904 3313 0 1174 301 46 26 chr17 5238204 5238619 -80199861 + LTR16A LTR ERVL 21 443 -7 577 303 12 47 chr17 5238645 5238899 -80199581 - L3 LINE CR1 -163 1414 1170 315 267 48 38 chr17 5240093 5240198 -80198282 - L2 LINE L2 -12 3260 3155 475 266 57 0 chr17 5240365 5240489 -80197991 + Charlie8 DNA MER1_type 92 222 -2195 304 309 0 94 chr17 5240582 5240731 -80197749 - L2 LINE L2 -238 3034 2900 2156 114 3 7 chr17 5240852 5241160 -80197320 + AluSx SINE Alu 5 311 -1 2098 220 50 45 chr17 5241284 5241820 -80196660 - MLT1G1 LTR MaLR -5 590 52 1496 178 23 33 chr17 5241823 5242311 -80196169 + AluJo SINE Alu 1 485 0 1128 71 0 33 chr17 5242127 5242355 -80196125 + (GAAA)n Simple_repeat Simple_repeat 3 224 0 1166 290 6 9 chr17 5242381 5242702 -80195778 - L2 LINE L2 -1018 2296 1977 195 296 26 70 chr17 5242716 5242831 -80195649 - L2 LINE L2 -563 2751 2642 2188 88 0 0 chr17 5243308 5243602 -80194878 + AluY SINE Alu 1 294 -17 214 239 226 9 chr17 5244280 5244437 -80194043 + MIR SINE MIR 35 262 0 808 236 106 22 chr17 5244676 5245123 -80193357 - LTR33A LTR ERVL 0 523 2 503 301 162 27 chr17 5245644 5246009 -80192471 + L2 LINE L2 2900 3313 0 222 265 0 0 chr17 5246009 5246077 -80192403 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 230 336 35 0 chr17 5246091 5246204 -80192276 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 299 227 10 0 chr17 5246211 5246308 -80192172 + (TGGG)n Simple_repeat Simple_repeat 2 99 0 1306 224 33 15 chr17 5246736 5247066 -80191414 + MLT2C1 LTR ERVL 1 336 -61 374 119 0 15 chr17 5247070 5247137 -80191343 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 234 277 67 118 chr17 5247763 5247958 -80190522 - L2 LINE L2 -93 3179 2995 665 316 14 19 chr17 5247985 5248194 -80190286 - MIR SINE MIR -18 244 37 1723 175 3 0 chr17 5248223 5248508 -80189972 - AluJb SINE Alu -26 286 1 22 35 0 0 chr17 5248733 5248762 -80189718 + AT_rich Low_complexity Low_complexity 1 29 0 547 190 28 28 chr17 5248854 5248996 -80189484 + MER96B DNA MER1_type? 192 333 -84 418 330 19 39 chr17 5249074 5249280 -80189200 - L2 LINE L2 -433 2881 2680 2175 122 39 28 chr17 5249451 5249813 -80188667 + THE1C LTR MaLR 8 373 -2 2332 163 18 50 chr17 5250220 5250722 -80187758 + L1ME2 LINE L1 5677 6162 -2 1016 156 28 69 chr17 5250835 5251053 -80187427 + MER3 DNA MER1_type 1 209 0 263 369 63 0 chr17 5251268 5251379 -80187101 - HAL1 LINE L1 -1635 872 755 492 309 114 61 chr17 5251511 5251951 -80186529 - HAL1 LINE L1 -2044 463 1 369 290 30 38 chr17 5253584 5253715 -80184765 - MLT1J LTR MaLR -152 359 230 2200 98 0 0 chr17 5253715 5254012 -80184468 + AluY SINE Alu 1 297 -14 467 235 115 68 chr17 5254039 5254273 -80184207 - MLT1J LTR MaLR -257 254 10 213 389 0 8 chr17 5255901 5256027 -80182453 + (CA)n Simple_repeat Simple_repeat 1 125 0 2120 103 0 3 chr17 5256286 5256578 -80181902 + AluSx SINE Alu 1 291 -21 2065 166 133 33 chr17 5256622 5257080 -80181400 - MLT1D LTR MaLR -1 504 1 2086 111 13 0 chr17 5257195 5257502 -80180978 - AluSx SINE Alu -1 311 1 763 244 29 6 chr17 5257509 5257681 -80180799 + MIR SINE MIR 48 223 -39 251 273 55 9 chr17 5258036 5258146 -80180334 - MLT1G1-int LTR MaLR -1618 117 3 360 204 48 39 chr17 5258148 5258251 -80180229 - MLT1G1 LTR MaLR 0 549 446 461 274 0 0 chr17 5258384 5258486 -80179994 + MIR SINE MIR 45 146 -62 1874 125 36 0 chr17 5258488 5258769 -80179711 + AluJo SINE Alu 2 292 -20 736 262 4 42 chr17 5259148 5259385 -80179095 - MLT2F LTR ERVL 0 663 436 2905 195 84 14 chr17 5259399 5259494 -80178986 - MER63C DNA MER1_type -143 917 830 1748 134 42 18 chr17 5259494 5259778 -80178702 + AluSx SINE Alu 1 291 -21 2905 195 84 14 chr17 5259778 5260303 -80178177 - MER63C DNA MER1_type -230 830 254 1417 263 36 39 chr17 5260344 5260755 -80177725 - MLT2F LTR ERVL -237 426 17 254 193 0 53 chr17 5260838 5260895 -80177585 - MLT2F LTR ERVL -593 70 17 1264 249 75 48 chr17 5262598 5262980 -80175500 - MLT1G1 LTR MaLR -210 341 1 1882 156 10 0 chr17 5263251 5263546 -80174934 + AluSx SINE Alu 1 298 -14 1266 213 39 110 chr17 5263671 5264163 -80174317 - MLT2B1 LTR ERVL -62 458 2 275 277 116 18 chr17 5264421 5264533 -80173947 - L2 LINE L2 -18 3254 3132 2167 105 3 10 chr17 5264913 5265333 -80173147 - AluSx SINE Alu 0 418 1 565 272 52 28 chr17 5265400 5265578 -80172902 - MIR SINE MIR -33 229 44 2002 146 26 19 chr17 5265578 5265955 -80172525 - L1MA4 LINE L1 -6 6294 5915 565 272 52 28 chr17 5265955 5265989 -80172491 - MIR SINE MIR -218 44 12 791 142 80 40 chr17 5266469 5266645 -80171835 + MER96B DNA MER1_type? 1 183 -234 195 42 0 0 chr17 5266785 5266809 -80171671 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2145 103 0 3 chr17 5266845 5267147 -80171333 - AluSg SINE Alu -9 301 1 29 28 0 0 chr17 5267237 5267273 -80171207 + AT_rich Low_complexity Low_complexity 1 36 0 1570 295 108 49 chr17 5267313 5267509 -80170971 - L1M4c LINE L1 -2005 4377 4194 2486 24 3 3 chr17 5267509 5267803 -80170677 - AluY SINE Alu -17 294 1 1570 295 108 49 chr17 5267803 5268298 -80170182 - L1M4c LINE L1 -2188 4194 3729 2245 109 0 3 chr17 5268298 5268609 -80169871 - AluSx SINE Alu -2 310 1 1570 295 108 49 chr17 5268609 5269562 -80168918 - L1M4c LINE L1 -2653 3729 2636 306 257 197 52 chr17 5269654 5269801 -80168679 - L1M4c LINE L1 -4019 2544 2420 2407 76 0 0 chr17 5269801 5270105 -80168375 - AluSg SINE Alu -6 304 1 306 257 197 52 chr17 5270105 5270206 -80168274 - L1M4c LINE L1 -4143 2420 2260 21 95 0 0 chr17 5270255 5270318 -80168162 + AT_rich Low_complexity Low_complexity 1 63 0 258 258 40 115 chr17 5270545 5270734 -80167746 - L1M4c LINE L1 -738 2005 1803 189 0 0 0 chr17 5270734 5270755 -80167725 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1560 184 7 0 chr17 5270758 5271046 -80167434 - AluJb SINE Alu -22 290 1 258 258 40 115 chr17 5271046 5271189 -80167291 - L1M4c LINE L1 -942 1801 1551 204 40 0 0 chr17 5271492 5271517 -80166963 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 1980 113 29 26 chr17 5271517 5271827 -80166653 - AluSx SINE Alu -1 311 1 254 291 47 12 chr17 5271908 5271994 -80166486 - MIR SINE MIR -48 214 126 479 284 41 50 chr17 5272254 5272472 -80166008 + L3b LINE CR1 1273 1488 -95 1564 169 7 36 chr17 5272819 5273120 -80165360 - AluJb SINE Alu -20 292 1 2249 82 0 0 chr17 5273181 5273475 -80165005 - AluSc SINE Alu -15 294 1 327 347 0 40 chr17 5273612 5273736 -80164744 + L2 LINE L2 3154 3272 0 279 282 59 0 chr17 5274150 5274235 -80164245 + L2 LINE L2 3204 3293 -20 215 335 52 31 chr17 5274984 5275175 -80163305 + L2 LINE L2 2563 2757 -557 541 336 92 36 chr17 5275217 5275628 -80162852 + L2 LINE L2 2831 3264 -8 924 250 113 76 chr17 5275818 5276306 -80162174 + LTR33A LTR ERVL 10 515 -8 2361 91 0 0 chr17 5277192 5277500 -80160980 - AluSg SINE Alu -2 308 1 351 273 89 99 chr17 5277608 5278022 -80160458 - L2 LINE L2 -18 3254 2845 411 266 75 44 chr17 5279490 5279681 -80158799 - MIR SINE MIR -67 141 3 21 0 0 0 chr17 5279811 5279832 -80158648 + AT_rich Low_complexity Low_complexity 1 21 0 808 245 135 5 chr17 5279959 5280167 -80158313 + MIR SINE MIR 28 262 0 230 266 43 21 chr17 5280284 5280378 -80158102 - L1ME LINE L1 -349 5817 5722 2255 87 3 7 chr17 5280702 5281011 -80157469 + AluSg SINE Alu 1 308 -2 592 205 111 8 chr17 5281107 5281224 -80157256 - MIR SINE MIR -71 191 63 228 35 0 0 chr17 5281633 5281662 -80156818 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 251 239 43 123 chr17 5281995 5282158 -80156322 + L2 LINE L2 2935 3084 -188 339 355 8 0 chr17 5282439 5282560 -80155920 + L3 LINE CR1 695 816 -761 318 233 35 35 chr17 5282740 5282826 -80155654 + L2 LINE L2 3228 3313 0 1913 96 46 7 chr17 5282878 5283160 -80155320 - AluSq SINE Alu -20 293 1 264 324 185 0 chr17 5283347 5283455 -80155025 + L2 LINE L2 3143 3270 -2 2052 105 0 0 chr17 5283623 5283899 -80154581 - AluSx SINE Alu -36 276 1 483 345 66 12 chr17 5284728 5284986 -80153494 - MLT1L LTR MaLR -5 610 339 337 279 36 18 chr17 5285012 5285123 -80153357 - MLT1L LTR MaLR -322 293 181 240 186 0 0 chr17 5285173 5285216 -80153264 - MLT1L LTR MaLR -431 184 142 2106 124 3 0 chr17 5285271 5285577 -80152903 - AluSx SINE Alu -5 307 1 601 209 51 19 chr17 5285577 5285735 -80152745 - MLT1H LTR MaLR -4 545 383 1785 160 3 22 chr17 5285972 5286285 -80152195 + AluJb SINE Alu 1 307 -5 303 252 66 18 chr17 5286604 5286729 -80151751 - MIR SINE MIR -47 161 33 189 250 75 25 chr17 5286886 5286966 -80151514 + L2 LINE L2 3191 3274 -39 406 368 16 11 chr17 5287015 5287205 -80151275 - MIR SINE MIR -70 192 2 2437 90 3 0 chr17 5287350 5287651 -80150829 - AluSp SINE Alu -11 302 1 430 248 58 82 chr17 5287656 5287700 -80150780 - MIR SINE MIR -49 213 169 1776 181 0 10 chr17 5287700 5287999 -80150481 + AluJo SINE Alu 1 296 -16 430 248 58 82 chr17 5287999 5288160 -80150320 - MIR SINE MIR -93 169 13 735 240 18 98 chr17 5289348 5289623 -80148857 - MIR SINE MIR -2 260 8 334 343 45 0 chr17 5289955 5290089 -80148391 + MIR3 SINE MIR 48 187 -21 1917 204 24 13 chr17 5290463 5290925 -80147555 + L1M4 LINE L1 4817 5283 -863 2006 113 23 30 chr17 5290928 5291249 -80147231 + AluSx SINE Alu 2 312 0 1015 193 0 0 chr17 5291251 5291422 -80147058 + AluSg/x SINE Alu 136 306 -6 570 160 40 8 chr17 5291422 5291547 -80146933 + L1MB8 LINE L1 6049 6177 -1 655 204 119 6 chr17 5291547 5291723 -80146757 + MIR SINE MIR 19 214 -48 239 283 33 0 chr17 5291755 5291815 -80146665 + L2 LINE L2 3157 3218 -54 2191 116 0 3 chr17 5291852 5292154 -80146326 + AluSx SINE Alu 1 301 -11 1855 150 56 3 chr17 5292168 5292454 -80146026 + AluSx SINE Alu 1 301 -11 37 81 0 0 chr17 5292466 5292552 -80145928 + AT_rich Low_complexity Low_complexity 1 86 0 291 261 33 11 chr17 5292878 5292970 -80145510 + HAL1 LINE L1 324 417 -2090 264 304 24 60 chr17 5292994 5293162 -80145318 + HAL1 LINE L1 1803 1964 -543 540 211 8 23 chr17 5293297 5293425 -80145055 + FLAM_A SINE Alu 1 126 -7 230 293 78 62 chr17 5293490 5293746 -80144734 + HAL1 LINE L1 2248 2507 0 1785 190 3 7 chr17 5293749 5294059 -80144421 + AluJo SINE Alu 1 309 -3 1864 152 24 7 chr17 5294272 5294562 -80143918 - AluJo SINE Alu -17 295 1 914 145 7 22 chr17 5294641 5294779 -80143701 - AluJo SINE Alu -176 136 1 239 219 67 92 chr17 5294781 5294848 -80143632 - MER112 DNA MER1_type -144 116 52 2439 80 0 3 chr17 5294848 5295147 -80143333 - AluY SINE Alu -13 298 1 239 219 67 92 chr17 5295147 5295198 -80143282 - MER112 DNA MER1_type -208 52 1 2452 92 0 0 chr17 5295334 5295640 -80142840 - AluSx SINE Alu -6 306 1 27 62 0 0 chr17 5297549 5297597 -80140883 + GC_rich Low_complexity Low_complexity 1 48 0 274 236 33 93 chr17 5298222 5298404 -80140076 - L1ME4a LINE L1 -16 6105 5935 296 143 32 0 chr17 5299018 5299081 -80139399 + L1M4 LINE L1 5498 5562 -612 2156 117 3 7 chr17 5299085 5299384 -80139096 - AluSx SINE Alu -14 298 1 262 233 11 79 chr17 5299746 5299935 -80138545 + (GAATG)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr17 5300931 5300952 -80137528 + (CAG)n Simple_repeat Simple_repeat 2 22 0 406 313 33 7 chr17 5300952 5301102 -80137378 - MIR SINE MIR -12 250 97 2324 104 0 0 chr17 5301131 5301420 -80137060 + AluSx SINE Alu 1 289 -23 294 29 0 0 chr17 5301421 5301456 -80137024 + (AATAG)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr17 5301716 5301737 -80136743 + (TGG)n Simple_repeat Simple_repeat 1 21 0 2128 257 94 34 chr17 5301828 5302467 -80136013 - MER45C DNA AcHobo -275 678 2 2228 117 3 0 chr17 5302796 5303095 -80135385 + AluSq SINE Alu 1 300 -13 2808 162 32 13 chr17 5303190 5303403 -80135077 + L1MB3 LINE L1 5618 5825 -358 2388 88 0 31 chr17 5303403 5303721 -80134759 + AluSq SINE Alu 1 308 -5 2808 162 32 13 chr17 5303721 5304062 -80134418 + L1MB3 LINE L1 5825 6183 0 257 0 30 0 chr17 5304104 5304137 -80134343 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 2023 140 0 40 chr17 5304206 5304341 -80134139 + AluSx SINE Alu 1 140 -172 2131 104 17 24 chr17 5304341 5304638 -80133842 + AluY SINE Alu 1 295 -16 2416 85 0 0 chr17 5304647 5304942 -80133538 + AluSg SINE Alu 1 295 -15 2023 140 0 40 chr17 5304942 5305117 -80133363 + AluSx SINE Alu 148 308 -4 711 192 8 0 chr17 5305117 5305242 -80133238 - FLAM_C SINE Alu -6 127 2 436 320 78 24 chr17 5305246 5305577 -80132903 + L1ME4a LINE L1 5567 5915 -206 470 143 0 0 chr17 5306371 5306441 -80132039 - AluSq SINE Alu -23 290 221 1059 136 0 19 chr17 5306444 5306598 -80131882 - AluSq SINE Alu -161 151 1 712 153 0 24 chr17 5306855 5306979 -80131501 - FLAM_C SINE Alu -1 142 22 1340 129 35 139 chr17 5306994 5307160 -80131320 - AluJo SINE Alu -17 295 174 2109 120 3 27 chr17 5307160 5307460 -80131020 - AluSx SINE Alu -19 293 1 1340 129 35 139 chr17 5307460 5307603 -80130877 - AluJo SINE Alu -138 174 18 211 310 110 20 chr17 5307609 5307709 -80130771 + L2 LINE L2 3173 3281 -32 * 222 293 158 56 chr17 5307707 5307922 -80130558 - MIR SINE MIR -6 256 20 2434 62 0 32 chr17 5307942 5308250 -80130230 + AluSx SINE Alu 1 298 -14 489 220 23 12 chr17 5308514 5308687 -80129793 + CT-rich Low_complexity Low_complexity 4 178 0 966 188 6 0 chr17 5309406 5309582 -80128898 + MER45A DNA AcHobo 1 177 -1 777 143 40 0 chr17 5309595 5309721 -80128759 - MER41B LTR ERV1 -375 260 130 443 139 60 114 chr17 5309840 5310006 -80128474 + MER41B-int LTR ERV1 5923 6079 -252 698 195 31 0 chr17 5310056 5310184 -80128296 - FLAM_C SINE Alu 0 133 2 809 238 78 4 chr17 5310289 5310533 -80127947 + MER41B-int LTR ERV1 6412 6673 -3 2329 151 24 10 chr17 5310533 5310943 -80127537 + MER41B LTR ERV1 111 526 -109 26 74 0 0 chr17 5310943 5310997 -80127483 + AT_rich Low_complexity Low_complexity 1 54 0 403 115 16 0 chr17 5311002 5311063 -80127417 - U7 snRNA snRNA 0 63 2 316 211 8 40 chr17 5311063 5311185 -80127295 + MER41A LTR ERV1 395 466 -12 401 195 35 0 chr17 5312439 5312526 -80125954 - MIR3 SINE MIR -6 202 113 197 273 196 42 chr17 5312568 5312711 -80125769 - L3 LINE CR1 -70 1507 1343 569 344 129 35 chr17 5312762 5313353 -80125127 + L3 LINE CR1 733 1378 -199 521 232 73 40 chr17 5313393 5313544 -80124936 - MIR SINE MIR -60 202 47 2082 126 7 0 chr17 5314184 5314477 -80124003 - AluY SINE Alu -15 296 2 875 281 87 99 chr17 5314957 5315361 -80123119 + L2 LINE L2 2234 2642 -671 1095 195 172 19 chr17 5315361 5315622 -80122858 - AluJo SINE Alu -1 301 1 2018 128 0 39 chr17 5315631 5315798 -80122682 - AluSx SINE Alu -12 300 149 2481 78 0 0 chr17 5315798 5316094 -80122386 - AluY SINE Alu -15 296 1 2018 128 0 39 chr17 5316094 5316238 -80122242 - AluSx SINE Alu -163 149 1 2215 109 0 7 chr17 5316238 5316540 -80121940 - AluSq SINE Alu -13 300 1 875 281 87 99 chr17 5316540 5316641 -80121839 + L2 LINE L2 2649 2750 -563 2494 91 3 0 chr17 5316641 5316948 -80121532 - AluSx SINE Alu -4 308 1 875 281 87 99 chr17 5316948 5317197 -80121283 + L2 LINE L2 2750 2990 -323 994 210 23 14 chr17 5317197 5317416 -80121064 + MER90 LTR ERV1 392 612 -2 2536 84 0 0 chr17 5318609 5318917 -80119563 - AluSq SINE Alu -5 308 1 2097 146 16 14 chr17 5319013 5319377 -80119103 + MLT1A1 LTR MaLR 1 365 0 1094 198 0 0 chr17 5319931 5320108 -80118372 + FRAM SINE Alu 1 176 0 367 158 13 13 chr17 5320297 5320373 -80118107 + LTR67 LTR ERVL 460 535 -22 1790 117 44 0 chr17 5320718 5320966 -80117514 - AluSx SINE Alu -14 298 40 305 267 69 0 chr17 5321452 5321553 -80116927 - MIR SINE MIR -72 136 29 316 247 0 14 chr17 5321634 5321707 -80116773 + MER81 DNA DNA 1 72 -42 360 335 95 13 chr17 5321988 5322146 -80116334 - L2 LINE L2 0 3272 3102 540 303 160 0 chr17 5322433 5322627 -80115853 + MIR SINE MIR 1 220 -42 2087 137 3 10 chr17 5322772 5323072 -80115408 - AluJb SINE Alu -14 298 1 787 221 35 0 chr17 5323439 5323611 -80114869 + MER45A DNA AcHobo 1 178 0 1534 98 31 9 chr17 5323943 5324168 -80114312 + MER30 DNA MER1_type 1 230 0 292 331 25 43 chr17 5324341 5324504 -80113976 + MIR SINE MIR 103 262 0 463 304 39 68 chr17 5325872 5326158 -80112322 - L1MEc LINE L1 -4923 1387 1109 2443 72 7 0 chr17 5326158 5326463 -80112017 - AluY SINE Alu -4 307 1 463 304 39 68 chr17 5326463 5326485 -80111995 - L1MEc LINE L1 -5201 1109 1088 402 295 65 11 chr17 5326488 5326749 -80111731 - L1MEc LINE L1 -5193 926 652 550 286 80 24 chr17 5326809 5327022 -80111458 + LTR33 LTR ERVL 297 521 0 206 261 43 14 chr17 5327526 5327595 -80110885 - L2 LINE L2 -3 3269 3199 * 631 310 47 5 chr17 5327589 5327802 -80110678 + MIR SINE MIR 5 226 -36 588 12 0 36 chr17 5327938 5328022 -80110458 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 1813 179 0 11 chr17 5328023 5328308 -80110172 - AluJb SINE Alu -30 282 1 263 263 92 0 chr17 5328554 5328630 -80109850 + L2 LINE L2 3153 3235 -37 874 229 51 85 chr17 5328642 5328750 -80109730 + L1MC5 LINE L1 7485 7595 -400 1960 136 0 14 chr17 5328750 5329037 -80109443 + AluSx SINE Alu 1 283 -29 225 65 0 0 chr17 5329037 5329068 -80109412 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 874 229 51 85 chr17 5329068 5329428 -80109052 + L1MC5 LINE L1 7593 7990 -5 1311 198 55 26 chr17 5330071 5330344 -80108136 + AluJb SINE Alu 1 281 -31 189 0 0 0 chr17 5330344 5330365 -80108115 + (T)n Simple_repeat Simple_repeat 1 21 0 2016 150 3 25 chr17 5330868 5331182 -80107298 + AluJo SINE Alu 1 307 -5 491 369 84 8 chr17 5331199 5331689 -80106791 + L2 LINE L2 2373 2899 -415 * 897 110 18 78 chr17 5331675 5331731 -80106749 - MER5A DNA MER1_type -4 185 127 2431 82 0 0 chr17 5331731 5332023 -80106457 + AluSg SINE Alu 1 292 -18 897 110 18 78 chr17 5332023 5332160 -80106320 - MER5A DNA MER1_type -62 127 5 702 251 174 20 chr17 5332159 5332510 -80105970 + L2 LINE L2 2868 3272 0 * 182 146 0 24 chr17 5332708 5332749 -80105731 + (ATGGTG)n Simple_repeat Simple_repeat 6 45 0 2349 117 0 0 chr17 5332930 5333238 -80105242 - AluSg SINE Alu -2 308 1 1291 124 0 0 chr17 5333238 5333415 -80105065 - AluY SINE Alu -8 303 127 1051 227 99 16 chr17 5333835 5334157 -80104323 - LTR16A LTR ERVL -4 446 98 517 284 119 35 chr17 5335122 5335516 -80102964 + L2 LINE L2 2862 3288 -25 246 62 0 0 chr17 5335517 5335549 -80102931 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr17 5335653 5335685 -80102795 + AT_rich Low_complexity Low_complexity 1 32 0 2076 101 40 4 chr17 5335685 5335962 -80102518 - AluSx SINE Alu -25 287 1 492 200 83 0 chr17 5335980 5336100 -80102380 - MIR SINE MIR -72 190 61 245 184 13 92 chr17 5336697 5336773 -80101707 - AluYb8 SINE Alu -1 307 238 * 359 62 0 0 chr17 5336742 5336790 -80101690 - Alu SINE Alu -254 48 1 714 284 80 12 chr17 5336810 5337134 -80101346 + L1MC4a LINE L1 5591 5936 -1872 371 307 37 0 chr17 5337345 5337471 -80101009 + MIR SINE MIR 27 160 -48 2052 146 0 3 chr17 5337832 5338133 -80100347 - AluSx SINE Alu -7 305 6 190 211 79 0 chr17 5338317 5338355 -80100125 - MIR SINE MIR -77 185 145 768 273 86 49 chr17 5338990 5339506 -80098974 + L2 LINE L2 2702 3231 -82 557 137 16 24 chr17 5339506 5339630 -80098850 + CT-rich Low_complexity Low_complexity 1 123 0 2194 92 0 0 chr17 5339630 5339922 -80098558 - AluSx SINE Alu -20 292 1 356 296 11 11 chr17 5339922 5340010 -80098470 + L2 LINE L2 3226 3313 0 220 295 30 60 chr17 5340211 5340377 -80098103 - L2 LINE L2 -464 2850 2690 645 105 0 0 chr17 5340380 5340466 -80098014 + AluSg/x SINE Alu 212 297 -12 2886 250 99 44 chr17 5340673 5341576 -80096904 + MER45C DNA AcHobo 2 953 0 730 226 0 0 chr17 5341959 5342096 -80096384 + FRAM SINE Alu 5 141 -35 914 111 0 16 chr17 5342115 5342358 -80096122 + (CA)n Simple_repeat Simple_repeat 1 239 0 394 336 52 42 chr17 5342861 5343111 -80095369 + MIR SINE MIR 3 253 -9 639 214 16 8 chr17 5343423 5343598 -80094882 + L1MA9 LINE L1 5874 6056 -244 264 203 72 0 chr17 5343812 5343881 -80094599 + MIR SINE MIR 49 122 -86 215 143 0 120 chr17 5343899 5344032 -80094448 + (CATA)n Simple_repeat Simple_repeat 3 119 0 313 370 66 9 chr17 5344044 5344255 -80094225 - MIR SINE MIR -9 253 31 1195 314 165 33 chr17 5344666 5345698 -80092782 + L2 LINE L2 959 2126 -1188 6443 208 44 66 chr17 5345740 5346070 -80092410 - L1M4 LINE L1 -1495 4651 4315 1769 155 3 7 chr17 5346070 5346373 -80092107 - AluJb SINE Alu -10 302 1 6443 208 44 66 chr17 5346373 5347646 -80090834 - L1M4 LINE L1 -1831 4315 3015 5164 138 26 20 chr17 5347646 5348550 -80089930 - L1MC1 LINE L1 0 6333 5424 6443 208 44 66 chr17 5348550 5348571 -80089909 - L1M4 LINE L1 -3131 3015 2995 1451 203 3 20 chr17 5348571 5348866 -80089614 - AluJo SINE Alu -22 290 1 6443 208 44 66 chr17 5348866 5349199 -80089281 - L1M4 LINE L1 -3151 2995 2736 1078 299 68 82 chr17 5349234 5350007 -80088473 + L2 LINE L2 2294 3051 -221 236 283 103 48 chr17 5350549 5350694 -80087786 + L2 LINE L2 3120 3272 -41 34 42 0 0 chr17 5350719 5350767 -80087713 + AT_rich Low_complexity Low_complexity 1 48 0 1493 178 7 4 chr17 5351531 5351806 -80086674 + AluJo SINE Alu 1 276 -36 351 0 0 0 chr17 5351809 5351848 -80086632 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 5351975 5351996 -80086484 + AT_rich Low_complexity Low_complexity 1 21 0 359 316 15 7 chr17 5352461 5352597 -80085883 + L1ME4a LINE L1 5712 5848 -273 1852 121 4 4 chr17 5352607 5352880 -80085600 + AluSx SINE Alu 6 278 -34 192 40 0 0 chr17 5352880 5352905 -80085575 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 423 0 0 0 chr17 5352907 5352954 -80085526 + (CA)n Simple_repeat Simple_repeat 2 48 0 1663 184 0 13 chr17 5352959 5353275 -80085205 + AluJb SINE Alu 1 312 0 1801 98 11 11 chr17 5353418 5353684 -80084796 - AluSq SINE Alu -15 298 33 333 115 0 0 chr17 5354135 5354196 -80084284 - AluJo SINE Alu -1 301 241 879 194 0 22 chr17 5354196 5354376 -80084104 - AluJo SINE Alu -136 176 1 430 276 104 27 chr17 5355032 5355253 -80083227 - MIR SINE MIR -12 250 13 443 231 56 0 chr17 5356368 5356476 -80082004 - MER81 DNA DNA 0 114 1 1958 95 14 11 chr17 5357220 5357504 -80080976 - AluSq SINE Alu -28 285 1 1843 152 0 7 chr17 5357583 5357886 -80080594 - AluSx SINE Alu -11 301 1 245 259 179 9 chr17 5358099 5358211 -80080269 + L2 LINE L2 3179 3309 -4 533 218 9 9 chr17 5360839 5360949 -80077531 - L2 LINE L2 -5 3308 3199 263 203 177 0 chr17 5360928 5361007 -80077473 + MIR SINE MIR 60 152 -56 * 554 277 100 4 chr17 5361223 5361454 -80077026 + LTR16C LTR ERVL 238 490 -1 2136 103 7 0 chr17 5361634 5361936 -80076544 - AluSq SINE Alu -9 304 1 2595 7 0 0 chr17 5362034 5362323 -80076157 - AluYb8 SINE Alu -29 289 1 340 281 16 16 chr17 5363153 5363274 -80075206 + L1PA12 LINE L1 2182 2302 -5279 5627 198 16 18 chr17 5363312 5364608 -80073872 + L1PA15 LINE L1 1231 2522 -4275 29 0 0 0 chr17 5364613 5364642 -80073838 + AT_rich Low_complexity Low_complexity 1 29 0 6818 126 23 2 chr17 5364642 5365315 -80073165 - L1MA1 LINE L1 -4 7717 7002 2364 83 0 0 chr17 5365315 5365617 -80072863 - AluY SINE Alu -9 302 1 6818 126 23 2 chr17 5365617 5366230 -80072250 - L1MA1 LINE L1 -719 7002 6403 * 12086 139 34 13 chr17 5366221 5369575 -80068905 - L1MA1 LINE L1 -2457 5108 1684 * 13221 220 84 12 chr17 5369574 5372789 -80065691 + L1PA15 LINE L1 2507 5984 -832 1826 136 31 3 chr17 5372789 5373083 -80065397 + AluSx SINE Alu 1 302 -10 13221 220 84 12 chr17 5373083 5373185 -80065295 + L1PA15 LINE L1 5984 6077 -739 42905 55 6 3 chr17 5373186 5375011 -80063469 + L1PA5 LINE L1 2 1820 -4334 2267 88 0 10 chr17 5375011 5375316 -80063164 - AluY SINE Alu -8 303 2 42905 55 6 3 chr17 5375316 5379623 -80058857 + L1PA5 LINE L1 1820 6152 -2 358 223 0 8 chr17 5379623 5379714 -80058766 + MLT2B1 LTR ERVL 132 220 -177 4017 134 41 61 chr17 5379714 5380305 -80058175 + L1PA15 LINE L1 6064 6638 -178 2134 103 0 6 chr17 5380305 5380616 -80057864 + AluY SINE Alu 1 309 -2 4017 134 41 61 chr17 5380616 5380779 -80057701 + L1PA15 LINE L1 6638 6803 -13 300 146 0 0 chr17 5381288 5381343 -80057137 - L1PA16 LINE L1 -6 6160 6106 377 333 133 36 chr17 5381614 5381839 -80056641 + MIR SINE MIR 9 255 -7 188 218 18 18 chr17 5381884 5381939 -80056541 - MIR3 SINE MIR -144 64 10 182 238 200 25 chr17 5383398 5383478 -80055002 + MIR SINE MIR 33 126 -82 219 69 0 0 chr17 5383533 5383562 -80054918 + (CAG)n Simple_repeat Simple_repeat 1 29 0 702 266 119 5 chr17 5383574 5383792 -80054688 - MIR SINE MIR -13 249 7 206 224 0 20 chr17 5385631 5385680 -80052800 + MIR SINE MIR 104 145 -63 1512 117 51 40 chr17 5385717 5385990 -80052490 - AluSx SINE Alu -36 276 1 1558 242 58 58 chr17 5386174 5386724 -80051756 - MER21B LTR ERV1 -75 788 239 857 245 40 20 chr17 5386727 5386976 -80051504 + L2 LINE L2 2531 2784 -530 839 155 0 8 chr17 5386983 5387112 -80051368 + FLAM_C SINE Alu 6 133 -10 1783 119 25 21 chr17 5387126 5387411 -80051069 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr17 5387424 5387448 -80051032 + (CAA)n Simple_repeat Simple_repeat 2 25 0 834 280 217 18 chr17 5387460 5387895 -80050585 + L2 LINE L2 2776 3295 -18 1864 209 44 38 chr17 5388949 5389451 -80049029 - LTR10B LTR ERV1 0 505 1 202 194 0 0 chr17 5389594 5389630 -80048850 + CT-rich Low_complexity Low_complexity 3 38 0 835 215 81 48 chr17 5389975 5390157 -80048323 - L1MD3 LINE L1 0 8042 7857 1909 125 3 29 chr17 5390157 5390469 -80048011 - AluSx SINE Alu -8 304 1 835 215 81 48 chr17 5390469 5390596 -80047884 - L1MD3 LINE L1 -185 7857 7736 488 313 16 61 chr17 5390819 5391152 -80047328 - L1MC4a LINE L1 -330 5912 5591 386 283 72 81 chr17 5391289 5391655 -80046825 + L1M4 LINE L1 1239 3902 -2742 553 296 91 78 chr17 5391657 5392556 -80045924 + L1M4c LINE L1 819 3739 -2643 417 294 16 16 chr17 5393170 5393296 -80045184 - FLAM_A SINE Alu -6 127 2 374 87 5 103 chr17 5393488 5393683 -80044797 + (TGGGGG)n Simple_repeat Simple_repeat 2 177 0 * 436 33 50 83 chr17 5393644 5393825 -80044655 + (GTGTG)n Simple_repeat Simple_repeat 4 178 0 357 96 60 42 chr17 5393850 5394017 -80044463 + (GGGTG)n Simple_repeat Simple_repeat 5 174 0 567 98 12 49 chr17 5394080 5394243 -80044237 + (TGGG)n Simple_repeat Simple_repeat 1 157 0 375 239 0 0 chr17 5394247 5394364 -80044116 + G-rich Low_complexity Low_complexity 1 117 0 2165 265 37 23 chr17 5394783 5395640 -80042840 - L1M4 LINE L1 -2147 3999 3131 1221 160 113 47 chr17 5397357 5397701 -80040779 + L1MB3 LINE L1 5816 6182 -1 284 275 75 6 chr17 5397949 5398109 -80040371 + L1ME LINE L1 5274 5444 -677 2050 122 3 0 chr17 5398113 5398417 -80040063 + AluSx SINE Alu 7 311 -1 1395 203 52 41 chr17 5398713 5399102 -80039378 + L1ME2 LINE L1 5755 6144 -20 1513 184 122 6 chr17 5399327 5399663 -80038817 + L1MC4 LINE L1 6529 6903 -1139 21 0 0 0 chr17 5399667 5399688 -80038792 + AT_rich Low_complexity Low_complexity 1 21 0 1361 177 3 46 chr17 5399691 5399974 -80038506 + AluJo SINE Alu 5 275 -37 497 272 181 33 chr17 5400037 5400362 -80038118 + L1ME LINE L1 5430 5804 -317 1396 194 0 11 chr17 5400435 5400708 -80037772 - AluJb SINE Alu -21 291 22 251 143 0 24 chr17 5400713 5400755 -80037725 - FAM SINE Alu -35 144 104 * 297 145 84 72 chr17 5400741 5400824 -80037656 - FAM SINE Alu -31 144 61 424 113 0 0 chr17 5401065 5401136 -80037344 + Alu SINE Alu 241 311 -1 209 301 243 10 chr17 5401159 5401262 -80037218 - MIR3 SINE MIR -78 130 4 2075 116 3 0 chr17 5403254 5403555 -80034925 - AluSx SINE Alu -10 302 1 21 57 0 0 chr17 5404937 5404972 -80033508 + AT_rich Low_complexity Low_complexity 1 35 0 719 140 18 0 chr17 5404972 5405086 -80033394 - FLAM_C SINE Alu -26 117 2 230 317 39 29 chr17 5405679 5405783 -80032697 - L2 LINE L2 -240 3032 2928 2094 109 0 3 chr17 5405863 5406156 -80032324 - AluSq SINE Alu -21 292 1 390 313 50 56 chr17 5406439 5406618 -80031862 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr17 5407831 5407854 -80030626 + GC_rich Low_complexity Low_complexity 1 23 0 687 181 0 0 chr17 5408740 5408845 -80029635 + AluSg/x SINE Alu 146 250 -62 1216 159 0 26 chr17 5408845 5409077 -80029403 + AluJb SINE Alu 85 310 -2 2025 135 3 0 chr17 5409141 5409444 -80029036 - AluSx SINE Alu -8 304 1 959 266 54 43 chr17 5409444 5409793 -80028687 - MER67C LTR ERV1 -201 509 157 272 321 199 36 chr17 5409819 5410180 -80028300 - L2 LINE L2 -2231 1083 664 1079 172 35 25 chr17 5411487 5411690 -80026790 - AluJo SINE Alu -22 290 86 750 234 177 54 chr17 5412547 5412785 -80025695 + MLT1D LTR MaLR 1 258 -132 2256 86 3 3 chr17 5412785 5413086 -80025394 + AluSx SINE Alu 1 301 -11 750 234 177 54 chr17 5413086 5413238 -80025242 + MLT1D LTR MaLR 258 390 0 1929 125 10 7 chr17 5413866 5414170 -80024310 + AluSx SINE Alu 1 305 -7 854 173 0 37 chr17 5414170 5414320 -80024160 + AluSg/x SINE Alu 134 288 -24 279 0 0 0 chr17 5414320 5414351 -80024129 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1741 160 0 10 chr17 5414351 5414651 -80023829 + AluJb SINE Alu 2 298 -14 2362 211 49 42 chr17 5414665 5415235 -80023245 + L1M4 LINE L1 3750 4327 -1819 1708 168 0 7 chr17 5415235 5415532 -80022948 - AluJo SINE Alu -17 295 1 2362 211 49 42 chr17 5415532 5415654 -80022826 + L1M4 LINE L1 4327 4447 -1699 261 108 0 0 chr17 5415657 5415694 -80022786 - THE1B LTR MaLR 0 364 328 1109 194 0 0 chr17 5415694 5415911 -80022569 + L1M4 LINE L1 4591 4807 -1339 806 144 0 0 chr17 5415923 5416041 -80022439 + AluSq/x SINE Alu 1 118 -194 1151 123 0 0 chr17 5416077 5416247 -80022233 - AluSg/x SINE Alu -12 300 131 806 133 7 7 chr17 5416259 5416394 -80022086 - AluYa5 SINE Alu -30 281 147 881 151 0 7 chr17 5416900 5417073 -80021407 - AluJb SINE Alu 0 311 140 2132 102 7 3 chr17 5417086 5417389 -80021091 - AluSx SINE Alu -8 304 1 297 252 26 52 chr17 5417723 5417838 -80020642 - L1ME LINE L1 -309 5855 5744 2037 120 3 0 chr17 5418242 5418534 -80019946 + AluSx SINE Alu 1 293 -19 306 276 62 53 chr17 5419501 5419744 -80018736 - L1MEd LINE L1 -4894 1225 981 310 303 80 55 chr17 5419834 5420072 -80018408 - HAL1 LINE L1 -1410 1097 854 2150 112 0 0 chr17 5420776 5421070 -80017410 + AluSx SINE Alu 1 294 -18 347 287 19 9 chr17 5421106 5421214 -80017266 + MIR SINE MIR 154 262 0 3793 115 32 2 chr17 5421253 5421808 -80016672 + LTR26 LTR ERV1 1 572 -31 387 314 51 22 chr17 5422052 5422189 -80016291 + MIR SINE MIR 51 191 -71 268 291 0 78 chr17 5423523 5423664 -80014816 - LTR16C LTR ERVL -15 476 347 2103 207 27 56 chr17 5423881 5424399 -80014081 + MLT1D LTR MaLR 1 503 -2 384 283 123 65 chr17 5424751 5424872 -80013608 - L2 LINE L2 -15 3298 3186 2233 98 0 0 chr17 5424872 5425168 -80013312 + AluSx SINE Alu 1 296 -16 384 283 123 65 chr17 5425168 5425371 -80013109 - L2 LINE L2 -127 3186 2955 328 307 45 61 chr17 5425671 5425866 -80012614 + MIR SINE MIR 7 198 -61 429 20 0 0 chr17 5426035 5426085 -80012395 + (GA)n Simple_repeat Simple_repeat 1 50 0 387 228 10 10 chr17 5426386 5426487 -80011993 - L1MD2 LINE L1 -3 6356 6256 2291 80 0 3 chr17 5427108 5427409 -80011071 + AluY SINE Alu 1 300 -11 367 269 56 9 chr17 5428067 5428175 -80010305 - MIR SINE MIR -111 151 39 399 291 0 47 chr17 5428446 5428573 -80009907 + MIR3 SINE MIR 10 130 -78 290 248 8 66 chr17 5428583 5428704 -80009776 + MIR SINE MIR 92 205 -57 804 100 0 0 chr17 5429579 5429699 -80008781 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 2205 81 0 0 chr17 5429699 5429984 -80008496 - AluSq SINE Alu -28 285 1 514 231 84 30 chr17 5430211 5430366 -80008114 - MIR SINE MIR -63 145 7 739 167 8 23 chr17 5431008 5431140 -80007340 - FLAM_C SINE Alu 0 133 4 1982 134 0 3 chr17 5431149 5431447 -80007033 - AluSx SINE Alu -15 297 1 2028 110 23 3 chr17 5431455 5431754 -80006726 - AluSx SINE Alu -7 305 1 310 289 11 11 chr17 5431864 5431954 -80006526 - MIR3 SINE MIR -27 181 92 554 296 47 28 chr17 5432375 5432588 -80005892 - MIR SINE MIR -37 225 9 1378 172 97 0 chr17 5433760 5434028 -80004452 + MLT1D LTR MaLR 1 294 -211 355 305 31 23 chr17 5484087 5484215 -79954265 - L2 LINE L2 -6 3307 3179 312 283 7 3 chr17 5484452 5484590 -79953890 + MIR SINE MIR 48 226 -36 358 305 52 55 chr17 5485215 5485559 -79952921 - L2 LINE L2 -94 3178 2836 287 304 29 0 chr17 5485632 5485734 -79952746 + MIR SINE MIR 36 140 -68 702 285 170 16 chr17 5485766 5486078 -79952402 - L2 LINE L2 0 3313 2954 391 259 61 27 chr17 5486092 5486239 -79952241 - MIR SINE MIR -27 235 84 258 105 0 0 chr17 5486470 5486508 -79951972 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 1984 134 25 0 chr17 5486508 5486792 -79951688 - AluJo SINE Alu -21 291 1 353 288 34 68 chr17 5486904 5487050 -79951430 - L1ME4a LINE L1 -14 6107 5967 343 131 321 36 chr17 5487160 5487244 -79951236 + AluJb SINE Alu 1 108 -194 188 264 94 0 chr17 5487653 5487706 -79950774 - MIR SINE MIR -99 163 106 752 261 61 8 chr17 5488798 5489043 -79949437 - MIR SINE MIR 0 262 5 1891 127 22 120 chr17 5489081 5489497 -79948983 + THE1C LTR MaLR 1 375 0 222 281 101 96 chr17 5490556 5490734 -79947746 + L3 LINE CR1 274 452 -1125 230 283 81 40 chr17 5490761 5490860 -79947620 - MIR SINE MIR -82 180 78 402 305 168 20 chr17 5490931 5491223 -79947257 + L3 LINE CR1 427 761 -816 199 188 0 0 chr17 5491268 5491300 -79947180 + MIR SINE MIR 76 107 -155 556 290 53 0 chr17 5491424 5491593 -79946887 + MIR SINE MIR 6 183 -79 691 306 107 31 chr17 5491746 5491858 -79946622 + L2 LINE L2 2722 2824 -489 5129 74 8 46 chr17 5491858 5492576 -79945904 + LTR8 LTR ERV1 1 691 0 691 306 107 31 chr17 5492576 5493015 -79945465 + L2 LINE L2 2824 3313 0 291 243 36 45 chr17 5494833 5494944 -79943536 - MIR SINE MIR -127 135 26 517 249 68 39 chr17 5495450 5495888 -79942592 + L1ME4a LINE L1 5562 6041 -80 1085 216 98 53 chr17 5496072 5496451 -79942029 + MSTD LTR MaLR 1 396 0 325 253 0 13 chr17 5497251 5497330 -79941150 + Charlie8 DNA MER1_type 1347 1424 -993 363 261 0 63 chr17 5497804 5497915 -79940565 - MIR SINE MIR -88 120 17 581 237 72 20 chr17 5498267 5498419 -79940061 + MIR SINE MIR 28 187 -75 223 122 122 0 chr17 5498547 5498588 -79939892 + MIR SINE MIR 176 221 -41 2069 105 0 3 chr17 5500738 5501024 -79937456 + AluSx SINE Alu 21 305 -7 217 349 28 28 chr17 5501201 5501310 -79937170 + MIR SINE MIR 37 145 -117 333 277 109 25 chr17 5501665 5501784 -79936696 + MLT1I LTR MaLR 18 146 -263 369 211 58 19 chr17 5501943 5502047 -79936433 + MLT1G LTR MaLR 483 590 0 518 261 187 13 chr17 5502086 5502252 -79936228 - L1MC4a LINE L1 -552 5569 5622 1366 129 35 22 chr17 5502252 5502484 -79935996 - MER46A DNA MER2_type -1 235 1 518 261 187 13 chr17 5502484 5502627 -79935853 - L1MC4a LINE L1 -498 5623 5506 1010 243 72 40 chr17 5502729 5503005 -79935475 - MER113 DNA MER1_type? 0 521 227 1504 142 32 21 chr17 5503005 5503287 -79935193 - L1MA8 LINE L1 -1 6290 6006 1010 243 72 40 chr17 5503287 5503410 -79935070 - MER113 DNA MER1_type? -294 227 109 1940 210 83 19 chr17 5503431 5503685 -79934795 - L1MC4a LINE L1 0 7808 7572 2191 106 143 13 chr17 5503685 5504064 -79934416 + MSTA LTR MaLR 1 428 0 1940 210 83 19 chr17 5504064 5504276 -79934204 - L1MC4a LINE L1 -236 7572 7312 359 266 0 21 chr17 5505340 5505434 -79933046 - L2 LINE L2 -34 3279 3188 381 117 17 0 chr17 5505853 5505913 -79932567 - MSTB LTR MaLR 0 432 372 1261 112 32 5 chr17 5505913 5506101 -79932379 + AluSq SINE Alu 99 291 -22 1884 188 42 6 chr17 5506101 5506462 -79932018 - MSTB LTR MaLR -52 374 1 383 312 30 21 chr17 5506731 5506994 -79931486 + MLT1J2 LTR MaLR 109 435 -15 241 176 20 0 chr17 5507263 5507314 -79931166 - MIR SINE MIR -64 198 147 1068 204 0 18 chr17 5507314 5507539 -79930941 - AluJo SINE Alu -5 307 87 297 0 0 0 chr17 5507543 5507576 -79930904 + (TC)n Simple_repeat Simple_repeat 2 34 0 403 245 189 0 chr17 5507576 5507682 -79930798 - MIR SINE MIR -123 139 14 1054 266 98 77 chr17 5508407 5508771 -79929709 - MLT1G3 LTR MaLR -17 513 177 2143 110 0 0 chr17 5508771 5509079 -79929401 + AluSq SINE Alu 1 308 -5 1054 266 98 77 chr17 5509079 5509260 -79929220 - MLT1G3 LTR MaLR -353 177 1 298 261 31 39 chr17 5509359 5509489 -79928991 - LTR67 LTR ERVL 0 557 429 790 283 11 0 chr17 5509636 5509827 -79928653 + MIR SINE MIR 65 257 -5 2016 117 3 0 chr17 5509888 5510170 -79928310 - AluSx SINE Alu -25 287 5 212 281 101 34 chr17 5510176 5510265 -79928215 + L2 LINE L2 3177 3271 -1 2108 100 37 7 chr17 5510330 5510630 -79927850 - AluSp SINE Alu -4 309 1 1845 120 33 10 chr17 5510723 5510744 -79927736 - AluSq SINE Alu -6 307 288 1007 111 11 17 chr17 5510744 5510925 -79927555 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1845 120 33 10 chr17 5510925 5511203 -79927277 - AluSq SINE Alu -25 288 1 221 322 161 71 chr17 5512741 5512996 -79925484 - L2 LINE L2 0 3272 2995 2101 96 28 0 chr17 5513010 5513301 -79925179 + AluSc SINE Alu 1 299 -10 806 304 23 5 chr17 5513312 5513532 -79924948 - MIR SINE MIR -2 260 37 647 317 44 26 chr17 5513730 5513957 -79924523 - MIR SINE MIR -12 250 20 195 45 0 68 chr17 5513957 5514001 -79924479 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 2259 99 0 6 chr17 5514003 5514316 -79924164 - AluSq SINE Alu 0 313 3 5273 42 12 9 chr17 5514340 5515442 -79923038 - SVA Other Other -954 1386 5 224 0 0 111 chr17 5515446 5515509 -79922971 + (GGGAGA)n Simple_repeat Simple_repeat 6 61 0 240 321 238 14 chr17 5515720 5516162 -79922318 + L2 LINE L2 2155 2695 -619 491 243 52 64 chr17 5516199 5516372 -79922108 + MIR SINE MIR 84 254 -8 268 328 134 0 chr17 5516392 5516511 -79921969 + L2 LINE L2 2713 2847 -467 307 158 0 0 chr17 5516582 5516639 -79921841 - L1MA8 LINE L1 -26 6265 6209 6304 235 81 30 chr17 5516679 5516714 -79921766 + L1MEc LINE L1 234 266 -5949 1514 186 53 42 chr17 5516714 5517075 -79921405 - MLT1A1 LTR MaLR 0 365 1 6304 235 81 30 chr17 5517075 5519447 -79919033 + L1MEc LINE L1 266 2720 -3495 9003 93 14 9 chr17 5519460 5520673 -79917807 + HSMAR1 DNA Mariner 5 1223 -64 7281 156 9 13 chr17 5520673 5520715 -79917765 + L1PB1 LINE L1 3796 3837 -2314 2911 88 6 135 chr17 5520715 5521235 -79917245 + MLT2A2 LTR ERVL 1 453 0 7281 156 9 13 chr17 5521235 5523553 -79914927 + L1PB1 LINE L1 3837 6150 -1 580 89 0 0 chr17 5523560 5523639 -79914841 + HSMAR1 DNA Mariner 1208 1286 -1 2119 98 0 55 chr17 5525306 5525633 -79912847 + AluSg SINE Alu 1 309 -1 219 280 0 0 chr17 5526154 5526204 -79912276 + CT-rich Low_complexity Low_complexity 3 52 0 2238 95 0 3 chr17 5527571 5527877 -79910603 + AluY SINE Alu 4 308 -3 2827 75 5 3 chr17 5528322 5528698 -79909782 + L1PA8 LINE L1 5796 6172 0 2377 167 50 27 chr17 5528739 5529224 -79909256 + L1MB3 LINE L1 5688 6183 0 410 321 99 9 chr17 5529235 5529447 -79909033 + L1MEd LINE L1 1210 1440 -4976 622 251 167 35 chr17 5529487 5529798 -79908682 - MLT1J LTR MaLR -43 468 117 232 208 0 19 chr17 5529823 5529876 -79908604 - MLT1L LTR MaLR -543 72 21 389 256 55 97 chr17 5529912 5530149 -79908331 + HAL1 LINE L1 1254 1466 -1041 2447 84 0 0 chr17 5530149 5530459 -79908021 + AluSx SINE Alu 1 310 -2 389 256 55 97 chr17 5530459 5530655 -79907825 + HAL1 LINE L1 1466 1669 -838 1558 221 42 32 chr17 5530830 5531008 -79907472 - L1M4 LINE L1 -824 5322 5147 2337 56 0 37 chr17 5531008 5531329 -79907151 - AluY SINE Alu -2 309 1 1558 221 42 32 chr17 5531329 5531584 -79906896 - L1M4 LINE L1 -999 5147 4885 213 313 0 0 chr17 5531933 5532000 -79906480 + T-rich Low_complexity Low_complexity 1 67 0 2230 101 0 0 chr17 5532241 5532539 -79905941 + AluSx SINE Alu 1 298 -14 834 154 7 13 chr17 5532674 5532823 -79905657 + AluJo SINE Alu 88 235 -77 771 274 89 78 chr17 5532835 5533187 -79905293 + L1MEd LINE L1 2223 2571 -3855 1902 131 0 39 chr17 5533187 5533499 -79904981 + AluSg SINE Alu 3 302 -8 771 274 89 78 chr17 5533499 5533742 -79904738 + L1MEd LINE L1 2571 2810 -3616 233 270 63 46 chr17 5534122 5534296 -79904184 + L1MEd LINE L1 3153 3329 -3097 454 322 7 20 chr17 5534534 5534683 -79903797 + MER5B DNA MER1_type 1 147 -31 471 293 104 30 chr17 5534700 5535257 -79903223 + L1M4 LINE L1 4131 4752 -1394 2107 150 3 15 chr17 5535257 5535598 -79902882 - MER1B DNA MER1_type 0 337 1 471 293 104 30 chr17 5535598 5535742 -79902738 + L1M4 LINE L1 4752 4884 -1262 784 268 91 78 chr17 5535762 5536259 -79902221 - MLT1J LTR MaLR 0 511 9 594 126 84 8 chr17 5536570 5536689 -79901791 + MER53 DNA DNA 1 128 -61 447 19 0 0 chr17 5536692 5536744 -79901736 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6246 56 13 0 chr17 5537468 5538238 -79900242 - L1PA8A LINE L1 -28 6103 5324 189 333 0 18 chr17 5538242 5538299 -79900181 - MIR SINE MIR -133 75 20 2064 140 13 3 chr17 5539492 5539799 -79898681 - AluSg SINE Alu 0 310 1 379 244 81 81 chr17 5540184 5540231 -79898249 + L2 LINE L2 3117 3163 -150 2133 112 3 7 chr17 5540231 5540541 -79897939 - AluSx SINE Alu 0 309 1 379 244 81 81 chr17 5540541 5540689 -79897791 + L2 LINE L2 3162 3313 0 677 318 39 33 chr17 5540755 5541092 -79897388 - MLT1I LTR MaLR 0 409 71 616 147 104 61 chr17 5541354 5541373 -79897107 + MER21A LTR ERV1 6 23 -908 365 0 22 0 chr17 5541373 5541418 -79897062 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 616 147 104 61 chr17 5541418 5541561 -79896919 + MER21A LTR ERV1 23 175 -756 * 2070 161 116 9 chr17 5541550 5541990 -79896490 + MER21B LTR ERV1 377 863 0 2004 106 0 15 chr17 5542251 5542524 -79895956 - AluSx SINE Alu -43 269 1 2243 110 3 49 chr17 5542861 5543188 -79895292 + AluSx SINE Alu 1 312 0 1328 171 38 46 chr17 5543581 5543844 -79894636 - AluJo SINE Alu -10 302 42 386 338 30 0 chr17 5544410 5544543 -79893937 - L3 LINE CR1 -1 1576 1440 535 314 12 17 chr17 5544566 5544738 -79893742 + MIR SINE MIR 90 260 -2 1345 104 6 0 chr17 5544856 5545029 -79893451 - AluSp SINE Alu -8 305 132 2478 96 0 0 chr17 5545029 5545341 -79893139 - AluSx SINE Alu 0 312 1 22 70 0 0 chr17 5545957 5546000 -79892480 + AT_rich Low_complexity Low_complexity 1 43 0 2327 80 0 48 chr17 5546337 5546651 -79891829 - AluSx SINE Alu -13 299 1 337 284 7 47 chr17 5546651 5546788 -79891692 + CT-rich Low_complexity Low_complexity 13 145 0 185 260 13 0 chr17 5546958 5547035 -79891445 + C-rich Low_complexity Low_complexity 4 81 0 290 274 32 19 chr17 5547045 5547202 -79891278 + (TCTCTG)n Simple_repeat Simple_repeat 3 161 0 180 111 0 0 chr17 5547213 5547240 -79891240 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 3117 219 60 34 chr17 5548535 5549192 -79889288 - L1MD1 LINE L1 0 7808 7170 2182 114 3 0 chr17 5549192 5549490 -79888990 - AluSx SINE Alu -13 299 1 3117 219 60 34 chr17 5549490 5549706 -79888774 - L1MD1 LINE L1 -638 7170 6079 318 50 0 0 chr17 5549732 5549772 -79888708 + (TA)n Simple_repeat Simple_repeat 1 40 0 467 259 121 30 chr17 5550223 5550455 -79888025 + MLT1K LTR MaLR 329 581 -7 400 250 125 60 chr17 5550607 5550775 -79887705 + MIR SINE MIR 28 206 -56 1069 210 0 14 chr17 5551399 5551618 -79886862 - MER20 DNA MER1_type 0 219 4 609 266 27 23 chr17 5551623 5551812 -79886668 + MIR SINE MIR 1 197 -63 476 186 29 10 chr17 5551866 5551968 -79886512 + L2 LINE L2 3151 3254 -18 2545 77 3 0 chr17 5552578 5552889 -79885591 + AluSx SINE Alu 1 312 0 710 174 45 50 chr17 5553447 5553648 -79884832 + LTR45 LTR ERV1 326 525 0 331 346 78 7 chr17 5553798 5553951 -79884529 + L2 LINE L2 2562 2725 -589 365 314 129 16 chr17 5553974 5554292 -79884188 + L1ME4a LINE L1 5697 6050 -71 2287 95 7 3 chr17 5554443 5554737 -79883743 - AluSg SINE Alu -15 295 1 970 221 101 4 chr17 5554779 5555055 -79883425 - LTR16C LTR ERVL 0 491 189 2173 96 34 10 chr17 5555190 5555483 -79882997 + AluSx SINE Alu 1 300 -12 213 303 81 0 chr17 5555503 5555602 -79882878 + MIR SINE MIR 86 192 -70 324 0 0 0 chr17 5555606 5555642 -79882838 + (TG)n Simple_repeat Simple_repeat 2 37 0 379 141 13 51 chr17 5555644 5555722 -79882758 + MLT1A2 LTR MaLR 4 78 -296 1064 170 5 25 chr17 5555739 5555939 -79882541 + MLT1A2 LTR MaLR 179 374 0 699 186 9 0 chr17 5556385 5556498 -79881982 - MER81 DNA DNA 0 114 1 546 273 142 24 chr17 5558201 5558490 -79879990 + MLT1K LTR MaLR 17 339 -249 2067 127 0 3 chr17 5558949 5559264 -79879216 - AluSg SINE Alu 0 314 1 264 291 22 15 chr17 5560182 5560316 -79878164 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 2323 96 3 0 chr17 5561487 5561779 -79876701 - AluSc SINE Alu -16 293 1 901 219 29 15 chr17 5561794 5561825 -79876655 - L1MA1 LINE L1 -380 5800 5771 1774 202 16 26 chr17 5561825 5562202 -79876278 - L1MB5 LINE L1 -8 6166 5794 4883 33 0 3 chr17 5562203 5562779 -79875701 + L1PA8 LINE L1 5594 6167 -5 901 219 29 15 chr17 5562779 5562995 -79875485 - L1MA1 LINE L1 -408 5772 5582 401 342 58 52 chr17 5562998 5563346 -79875134 + L2 LINE L2 2879 3228 -44 220 218 23 0 chr17 5563854 5563941 -79874539 + GA-rich Low_complexity Low_complexity 1 89 0 261 277 26 26 chr17 5564047 5564202 -79874278 + (CAGAGA)n Simple_repeat Simple_repeat 6 160 0 466 283 50 13 chr17 5564326 5564485 -79873995 - MIR SINE MIR -81 181 17 5996 146 105 89 chr17 5564559 5566228 -79872252 + pTR5 LTR ERV1 743 2438 0 2163 99 0 55 chr17 5566700 5567012 -79871468 + AluSc SINE Alu 6 300 -9 419 185 260 27 chr17 5567098 5567244 -79871236 + L2 LINE L2 3134 3313 0 205 319 104 0 chr17 5567375 5567510 -79870970 - L2 LINE L2 -560 2754 2606 361 133 0 80 chr17 5568067 5568180 -79870300 + (CCCCCA)n Simple_repeat Simple_repeat 2 105 0 347 310 161 35 chr17 5568609 5568957 -79869523 + L2 LINE L2 2873 3264 -8 252 246 35 70 chr17 5568971 5569085 -79869395 + MIR SINE MIR 29 138 -70 1017 259 17 4 chr17 5569160 5569399 -79869081 - MIR SINE MIR -10 252 11 626 246 191 5 chr17 5569422 5569621 -79868859 - MIR SINE MIR -7 255 20 252 402 0 9 chr17 5569639 5569746 -79868734 - MIR3 SINE MIR -54 154 49 629 253 69 35 chr17 5569885 5570207 -79868273 - MLT1H LTR MaLR -235 336 14 2371 94 7 0 chr17 5570217 5570516 -79867964 + AluSx SINE Alu 1 301 -11 2137 150 36 85 chr17 5571334 5571922 -79866558 + L1MB3 LINE L1 5625 6183 0 2402 98 0 3 chr17 5572619 5572924 -79865556 + AluSq SINE Alu 2 305 -8 182 333 65 36 chr17 5573251 5573352 -79865128 - MIR SINE MIR -23 239 131 2130 119 0 13 chr17 5573352 5573655 -79864825 + AluSx SINE Alu 1 299 -13 182 333 65 36 chr17 5573655 5573691 -79864789 - MIR SINE MIR -131 131 98 264 323 58 35 chr17 5573776 5574002 -79864478 - L2 LINE L2 -533 2781 2551 260 213 38 12 chr17 5574447 5574527 -79863953 + GA-rich Low_complexity Low_complexity 3 84 0 204 294 0 74 chr17 5575187 5575350 -79863130 + G-rich Low_complexity Low_complexity 12 162 0 344 333 108 5 chr17 5575554 5575740 -79862740 - MIR SINE MIR 0 262 58 2223 95 4 0 chr17 5575970 5576243 -79862237 - AluSx SINE Alu -38 274 1 796 191 114 64 chr17 5576516 5576736 -79861744 - MLT1D LTR MaLR 0 505 275 2556 206 36 10 chr17 5576819 5577405 -79861075 - MLT1H-int LTR MaLR -770 601 1 1736 217 2 42 chr17 5577407 5577817 -79860663 - MLT2C1 LTR ERVL -2 395 2 293 194 108 21 chr17 5578057 5578150 -79860330 - MLT1H LTR MaLR -13 536 436 439 282 161 10 chr17 5580525 5580802 -79857678 + MIR SINE MIR 4 252 -10 198 103 0 0 chr17 5580812 5580841 -79857639 + (CAT)n Simple_repeat Simple_repeat 2 30 0 31 44 0 0 chr17 5581032 5581077 -79857403 + AT_rich Low_complexity Low_complexity 1 45 0 185 284 123 25 chr17 5581118 5581199 -79857281 - MIR3 SINE MIR -33 175 87 1683 162 65 0 chr17 5581254 5581413 -79857067 - AluJo SINE Alu -11 301 154 194 88 0 29 chr17 5581413 5581447 -79857033 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1683 162 65 0 chr17 5581447 5581565 -79856915 - AluJo SINE Alu -158 154 6 551 318 90 0 chr17 5581834 5582067 -79856413 - MIR SINE MIR -8 254 1 243 218 35 103 chr17 5582195 5582270 -79856210 + L2 LINE L2 3229 3299 -14 186 103 0 0 chr17 5582270 5582299 -79856181 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 243 218 35 103 chr17 5582299 5582310 -79856170 + L2 LINE L2 3299 3309 -4 2356 92 0 13 chr17 5582394 5582700 -79855780 + AluSx SINE Alu 1 302 -10 182 262 0 49 chr17 5582797 5582858 -79855622 - L2 LINE L2 -531 2783 2726 447 220 148 99 chr17 5584071 5584416 -79854064 + LTR33 LTR ERVL 2 363 -158 1102 285 103 14 chr17 5586226 5586664 -79851816 - L2 LINE L2 -8 3305 2829 219 250 88 15 chr17 5586897 5586965 -79851515 - L2 LINE L2 -23 3249 3177 291 315 33 0 chr17 5587329 5587421 -79851059 - MIR SINE MIR -78 184 90 546 279 85 5 chr17 5587425 5587626 -79850854 + LTR50 LTR ERVL 3 219 -576 406 295 179 0 chr17 5588674 5588847 -79849633 + MIR SINE MIR 58 261 -1 294 296 208 0 chr17 5588972 5589097 -79849383 + MIR SINE MIR 110 260 -2 934 356 59 41 chr17 5589161 5589741 -79848739 - L3 LINE CR1 -194 1383 788 2184 120 30 0 chr17 5589741 5590041 -79848439 - AluSx SINE Alu -3 309 1 934 356 59 41 chr17 5590041 5590125 -79848355 - L3 LINE CR1 -789 788 707 267 280 40 64 chr17 5590142 5590267 -79848213 - MIR SINE MIR -57 151 30 293 281 0 158 chr17 5590269 5590370 -79848110 - L3 LINE CR1 -4 1573 1536 1726 172 33 0 chr17 5590370 5590672 -79847808 - AluJo SINE Alu 0 312 1 293 281 0 158 chr17 5590672 5590830 -79847650 - L3 LINE CR1 -41 1536 1355 826 233 31 54 chr17 5591429 5591652 -79846828 + MER20 DNA MER1_type 2 219 0 630 222 50 61 chr17 5592337 5592535 -79845945 + MER63A DNA MER1_type 1 196 -14 553 190 12 104 chr17 5593467 5593630 -79844850 - MER58C DNA MER1_type -1 214 67 24 0 0 0 chr17 5594602 5594626 -79843854 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr17 5594626 5594659 -79843821 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1979 99 7 7 chr17 5594662 5594944 -79843536 - AluSx SINE Alu -30 282 1 264 349 23 0 chr17 5595876 5595962 -79842518 + L2 LINE L2 2686 2773 -541 479 167 9 0 chr17 5596021 5596135 -79842345 + (CA)n Simple_repeat Simple_repeat 1 115 0 408 232 80 115 chr17 5596483 5596948 -79841532 + L1MC4a LINE L1 5601 5824 -297 1821 174 32 32 chr17 5596972 5597414 -79841066 - L1MDa LINE L1 -4870 1670 1229 1076 160 26 90 chr17 5597427 5597695 -79840785 - L1MB8 LINE L1 -1 6177 5927 793 206 9 72 chr17 5597689 5597794 -79840686 - L1MDa LINE L1 -5306 1234 1149 * 2416 175 38 9 chr17 5597794 5598246 -79840234 - MLT1C LTR MaLR 0 467 3 793 206 9 72 chr17 5598246 5598363 -79840117 - L1MDa LINE L1 -5391 1149 1026 1509 181 199 6 chr17 5598363 5598530 -79839950 - MSTD LTR MaLR 0 396 263 186 43 0 0 chr17 5598530 5598553 -79839927 + (GA)n Simple_repeat Simple_repeat 2 24 0 1509 181 199 6 chr17 5598553 5598716 -79839764 - MSTD LTR MaLR -133 263 2 2258 229 262 21 chr17 5598716 5599529 -79838951 - L1MDa LINE L1 -5509 1031 23 440 308 21 12 chr17 5599560 5599751 -79838729 - L1 LINE L1 -2281 3865 3668 219 114 0 0 chr17 5600022 5600057 -79838423 + (T)n Simple_repeat Simple_repeat 1 35 0 578 320 119 50 chr17 5600188 5600826 -79837654 - L1 LINE L1 -2764 3382 2701 221 240 0 0 chr17 5601113 5601163 -79837317 + GA-rich Low_complexity Low_complexity 2 51 0 1753 120 0 0 chr17 5601386 5601636 -79836844 - AluSc SINE Alu -5 304 55 947 264 28 0 chr17 5602124 5602336 -79836144 + MIR SINE MIR 45 262 0 1567 169 196 88 chr17 5602816 5603347 -79835133 + LTR4 LTR ERV1 1 588 0 2086 259 87 32 chr17 5603802 5604185 -79834295 - HAL1 LINE L1 0 2507 2146 2010 154 3 0 chr17 5604185 5604491 -79833989 - AluSx SINE Alu -5 307 1 2086 259 87 32 chr17 5604491 5605004 -79833476 - HAL1 LINE L1 -361 2146 1562 1860 257 174 38 chr17 5605000 5605288 -79833192 - HAL1 LINE L1 -1165 1342 1095 * 2059 119 3 3 chr17 5605288 5605581 -79832899 - AluSc SINE Alu -16 293 1 1860 257 174 38 chr17 5605581 5605612 -79832868 - HAL1 LINE L1 -1412 1095 1070 3510 108 61 34 chr17 5605612 5605915 -79832565 + MER4B LTR ERV1 1 294 -316 2289 95 0 0 chr17 5605915 5606219 -79832261 - AluY SINE Alu -7 304 1 3510 108 61 34 chr17 5606219 5606509 -79831971 + MER4B LTR ERV1 294 610 0 1860 257 174 38 chr17 5606509 5607362 -79831118 - HAL1 LINE L1 -1437 1070 9 587 256 103 91 chr17 5607362 5607431 -79831049 - L1ME4a LINE L1 -3 6118 6051 2104 112 0 0 chr17 5607431 5607718 -79830762 + AluSx SINE Alu 26 312 0 587 256 103 91 chr17 5607718 5607934 -79830546 - L1ME4a LINE L1 -70 6051 5824 2284 82 3 0 chr17 5607934 5608228 -79830252 + AluSp SINE Alu 1 295 -18 587 256 103 91 chr17 5608228 5608359 -79830121 - L1ME4a LINE L1 -297 5824 5696 319 149 104 15 chr17 5608371 5608438 -79830042 + MER5B DNA MER1_type 72 144 -34 281 322 114 31 chr17 5608455 5608744 -79829736 - L1ME4a LINE L1 -2150 5658 5346 207 0 0 0 chr17 5609021 5609044 -79829436 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2165 110 7 0 chr17 5609360 5609661 -79828819 - AluSx SINE Alu -9 303 1 797 216 42 6 chr17 5609914 5610081 -79828399 + MER5B DNA MER1_type 5 177 -1 343 217 250 0 chr17 5611016 5611136 -79827344 + MER5A DNA MER1_type 13 162 -27 528 223 54 34 chr17 5611142 5611290 -79827190 - MIR SINE MIR -110 152 2 228 274 81 40 chr17 5611389 5611513 -79826967 - L2 LINE L2 -212 3060 2932 1421 181 48 15 chr17 5612006 5612468 -79826012 - MER92B LTR ERV1 -2 552 1 401 263 54 70 chr17 5612844 5613030 -79825450 + MER5A DNA MER1_type 1 183 -6 * 425 289 58 28 chr17 5613018 5613339 -79825141 - L2 LINE L2 -215 3057 2727 433 333 88 5 chr17 5614527 5614743 -79823737 + L3 LINE CR1 1344 1577 0 368 261 185 0 chr17 5615257 5615376 -79823104 - MIR SINE MIR -5 257 117 3222 141 49 37 chr17 5615909 5616483 -79821997 - LTR1 LTR ERV1 -2 783 203 885 98 0 0 chr17 5616536 5616658 -79821822 - AluSq SINE Alu -13 300 179 676 91 0 0 chr17 5616658 5616746 -79821734 - AluSq SINE Alu -218 95 8 1101 93 115 11 chr17 5616746 5616928 -79821552 - LTR1 LTR ERV1 -584 201 1 299 196 22 76 chr17 5616990 5617048 -79821432 + HAL1 LINE L1 2409 2462 -45 1738 166 0 20 chr17 5617048 5617349 -79821131 - AluJo SINE Alu -17 295 1 299 196 22 76 chr17 5617349 5617382 -79821098 + HAL1 LINE L1 2462 2495 -12 1595 113 13 0 chr17 5617598 5617829 -79820651 - AluY SINE Alu -5 306 73 859 215 80 52 chr17 5618306 5618557 -79819923 + MIR SINE MIR 5 262 0 294 277 175 15 chr17 5618866 5619003 -79819477 - MER5A DNA MER1_type 0 189 31 2211 268 32 35 chr17 5620493 5621237 -79817243 + L1ME LINE L1 13 754 -5316 1733 15 0 0 chr17 5621341 5621538 -79816942 - L1P LINE L1 -1040 5106 4910 12060 26 1 2 chr17 5621538 5622947 -79815533 + L1P LINE L1 3515 4921 -1225 1645 113 41 15 chr17 5623066 5623141 -79815339 - L1PB3 LINE L1 -286 5868 5796 216 0 0 0 chr17 5623141 5623165 -79815315 + (CA)n Simple_repeat Simple_repeat 2 25 0 1645 113 41 15 chr17 5623165 5623355 -79815125 - L1PB3 LINE L1 -358 5796 5596 347 227 35 35 chr17 5623464 5623605 -79814875 - L1M4 LINE L1 -1481 4665 4525 991 265 0 0 chr17 5623741 5623964 -79814516 - MER58A DNA MER1_type 0 224 2 7965 17 0 4 chr17 5624071 5625097 -79813383 - L1PA3 LINE L1 -3 6152 5127 513 261 8 39 chr17 5625290 5625420 -79813060 - L2 LINE L2 -4 3309 3184 876 123 0 0 chr17 5625504 5625626 -79812854 + AluSq/x SINE Alu 14 135 -177 2125 132 0 0 chr17 5625626 5625936 -79812544 + AluSx SINE Alu 1 310 -2 2990 136 6 6 chr17 5625956 5626441 -79812039 + L1PA16 LINE L1 5682 6166 0 301 345 18 30 chr17 5626472 5626640 -79811840 - L2 LINE L2 -260 3053 2888 1832 164 59 0 chr17 5626791 5627114 -79811366 - MER54B LTR ERVL -451 342 1 199 265 61 10 chr17 5627167 5627265 -79811215 + L2 LINE L2 2853 2955 -317 233 271 0 12 chr17 5627692 5627777 -79810703 + GA-rich Low_complexity Low_complexity 1 84 0 384 326 98 36 chr17 5627779 5628601 -79809879 - L2 LINE L2 -82 3190 2316 302 336 18 0 chr17 5629870 5629983 -79808497 + MIR SINE MIR 34 148 -114 308 238 12 12 chr17 5630198 5630278 -79808202 + MIR SINE MIR 70 149 -113 2222 95 0 7 chr17 5630297 5630601 -79807879 - AluSg1 SINE Alu -7 302 1 1632 167 7 23 chr17 5630636 5630935 -79807545 + AluJb SINE Alu 1 294 -18 1288 237 219 9 chr17 5630950 5631406 -79807074 + L1MC4a LINE L1 7252 7803 -5 21 36 0 0 chr17 5631406 5631434 -79807046 + AT_rich Low_complexity Low_complexity 1 28 0 260 238 71 79 chr17 5632626 5632752 -79805728 + MIR SINE MIR 1 129 -79 292 271 12 12 chr17 5632944 5633029 -79805451 - L2 LINE L2 -31 3282 3198 688 271 52 49 chr17 5633200 5633548 -79804932 - L1MC/D LINE L1 -452 5669 5334 1670 141 65 3 chr17 5633648 5633938 -79804542 + AluSx SINE Alu 1 308 -4 3088 190 75 35 chr17 5635155 5635428 -79803052 - L1MB7 LINE L1 0 6184 5923 2430 50 3 0 chr17 5635428 5635729 -79802751 + AluY SINE Alu 1 302 -9 3088 190 75 35 chr17 5635729 5636232 -79802248 - L1MB7 LINE L1 -261 5923 5377 260 299 171 17 chr17 5636318 5636552 -79801928 - L1MC/D LINE L1 -1927 5881 5612 350 304 28 112 chr17 5636653 5636797 -79801683 + L3 LINE CR1 1381 1503 -74 2124 95 0 14 chr17 5636797 5637092 -79801388 - AluSx SINE Alu -19 293 3 350 304 28 112 chr17 5637092 5637161 -79801319 + L3 LINE CR1 1503 1576 -1 885 63 0 0 chr17 5637966 5638077 -79800403 - AluSc SINE Alu -10 299 189 2181 109 0 0 chr17 5638077 5638380 -79800100 + AluSg SINE Alu 3 305 -5 650 189 43 113 chr17 5638449 5638634 -79799846 + MER5B DNA MER1_type 7 178 0 270 282 13 0 chr17 5639149 5639227 -79799253 + MIR SINE MIR 57 135 -73 252 329 50 21 chr17 5639230 5639370 -79799110 - L3 LINE CR1 -137 1440 1297 2102 79 4 0 chr17 5639608 5639902 -79798578 + AluSx SINE Alu 16 310 0 602 298 124 3 chr17 5639971 5640330 -79798150 + L2 LINE L2 2623 3029 -284 1809 87 0 0 chr17 5640332 5640551 -79797929 - AluSg/x SINE Alu -19 293 75 395 119 0 0 chr17 5640552 5640611 -79797869 + AluS SINE Alu 5 63 -237 651 206 99 110 chr17 5640611 5640903 -79797577 + L2 LINE L2 3024 3312 -1 297 306 32 48 chr17 5640905 5641091 -79797389 + MIR SINE MIR 23 205 -57 2207 110 19 13 chr17 5641838 5642147 -79796333 - AluSx SINE Alu -1 311 1 672 211 146 89 chr17 5642157 5642493 -79795987 - L1ME3A LINE L1 0 6170 5816 244 195 110 0 chr17 5642862 5642944 -79795536 - L1ME LINE L1 -314 5856 5766 3738 122 14 4 chr17 5643045 5643595 -79794885 - LTR9B LTR ERV1 0 644 89 2333 71 10 3 chr17 5643595 5643892 -79794588 + AluY SINE Alu 1 299 -12 785 218 62 25 chr17 5643892 5644185 -79794295 - L1ME LINE L1 -639 5525 5224 1168 188 19 5 chr17 5645036 5645249 -79793231 - MER20 DNA MER1_type -3 216 1 558 294 84 33 chr17 5645550 5645849 -79792631 - MLT1K LTR MaLR 0 588 275 610 306 62 36 chr17 5646144 5646811 -79791669 - L1ME LINE L1 -2177 3969 3286 667 145 97 32 chr17 5647091 5647215 -79791265 + FLAM_C SINE Alu 1 132 -1 721 240 104 40 chr17 5648439 5648814 -79789666 - HAL1 LINE L1 -1012 1495 1097 1161 197 73 0 chr17 5648833 5649067 -79789413 + L1MB5 LINE L1 5858 6108 -66 460 290 52 72 chr17 5649167 5649376 -79789104 - HAL1 LINE L1 -1433 1074 873 2712 167 105 8 chr17 5649376 5649890 -79788590 + MLT1F1 LTR MaLR 4 567 0 460 290 52 72 chr17 5649890 5650028 -79788452 - HAL1 LINE L1 -1634 873 734 2076 125 0 4 chr17 5650401 5650680 -79787800 - AluSx SINE Alu -34 278 1 2302 100 0 0 chr17 5650958 5651249 -79787231 - AluSg SINE Alu -19 291 1 1035 213 0 82 chr17 5651316 5651560 -79786920 - MER58A DNA MER1_type 0 224 1 449 250 91 0 chr17 5651592 5651724 -79786756 + L1MD2 LINE L1 6211 6354 -5 1096 76 0 0 chr17 5651775 5651906 -79786574 + AluSp SINE Alu 2 132 -181 2294 96 13 0 chr17 5651908 5652210 -79786270 + AluSp SINE Alu 1 306 -7 974 156 6 31 chr17 5652540 5652700 -79785780 - FRAM SINE Alu -18 158 3 347 261 17 34 chr17 5653131 5653250 -79785230 - L2 LINE L2 -11 3261 3145 2471 91 0 0 chr17 5653859 5654168 -79784312 + AluSg SINE Alu 1 309 -1 182 194 0 0 chr17 5654404 5654440 -79784040 - L2 LINE L2 0 3313 3278 689 248 143 24 chr17 5654566 5655006 -79783474 - L2 LINE L2 -71 3242 2741 2385 79 0 3 chr17 5655009 5655300 -79783180 + AluSq SINE Alu 1 290 -23 457 121 33 0 chr17 5655300 5655391 -79783089 + G-rich Low_complexity Low_complexity 2 95 0 533 206 99 110 chr17 5655577 5655869 -79782611 - L2 LINE L2 -1 3312 3024 443 129 0 0 chr17 5655869 5655931 -79782549 - AluS SINE Alu -247 63 2 743 256 89 4 chr17 5655931 5656201 -79782279 - L2 LINE L2 -769 2545 2253 2297 95 0 13 chr17 5657674 5657979 -79780501 - AluY SINE Alu -10 301 1 267 319 25 8 chr17 5658156 5658275 -79780205 - MIR SINE MIR -29 233 113 378 303 36 18 chr17 5660150 5660315 -79778165 - L3 LINE CR1 -37 1540 1373 1686 263 70 92 chr17 5660585 5662061 -79776419 + L1MEc LINE L1 837 2237 -3978 983 234 128 35 chr17 5662061 5662104 -79776376 + L1M4 LINE L1 4287 4325 -1821 2322 115 0 0 chr17 5662104 5662408 -79776072 + AluSg SINE Alu 1 304 -6 983 234 128 35 chr17 5662408 5662740 -79775740 + L1M4 LINE L1 4325 4697 -1449 5539 148 50 35 chr17 5662747 5663139 -79775341 - Tigger3b DNA MER2_type -1797 1231 846 2276 117 0 0 chr17 5663139 5663448 -79775032 - AluSc SINE Alu 0 309 1 5539 148 50 35 chr17 5663448 5663691 -79774789 - Tigger3b DNA MER2_type -2182 846 608 189 0 0 0 chr17 5663691 5663712 -79774768 + (TATG)n Simple_repeat Simple_repeat 4 24 0 5539 148 50 35 chr17 5663712 5664002 -79774478 - Tigger3b DNA MER2_type -2420 608 286 2051 124 0 54 chr17 5664002 5664317 -79774163 + AluSq SINE Alu 1 298 -15 5539 148 50 35 chr17 5664317 5664431 -79774049 - Tigger3b DNA MER2_type -2742 286 175 1565 211 54 30 chr17 5664519 5665053 -79773427 + L1M4 LINE L1 4749 5343 -803 2574 68 0 3 chr17 5665078 5665385 -79773095 - AluY SINE Alu -5 306 1 1241 114 51 0 chr17 5665385 5665561 -79772919 - AluSg/x SINE Alu -3 309 125 378 291 7 11 chr17 5665610 5665760 -79772720 + MIR SINE MIR 21 168 -60 2745 42 0 0 chr17 5667067 5667377 -79771103 + AluY SINE Alu 1 310 -1 286 270 0 14 chr17 5667660 5667734 -79770746 - MIR SINE MIR -143 119 47 263 221 70 35 chr17 5668164 5668250 -79770230 - MIR SINE MIR -81 181 93 284 287 31 23 chr17 5668509 5668638 -79769842 + MIR3 SINE MIR 41 170 -38 1092 124 18 0 chr17 5668655 5668943 -79769537 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 1029 227 10 0 chr17 5668994 5669192 -79769288 - MER58A DNA MER1_type -24 200 1 256 269 74 9 chr17 5669397 5669505 -79768975 - L2 LINE L2 -327 2986 2872 601 185 29 0 chr17 5670336 5670509 -79767971 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 772 110 25 12 chr17 5670542 5670705 -79767775 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1285 110 0 0 chr17 5670732 5670905 -79767575 - AluSp SINE Alu -1 312 140 578 276 0 0 chr17 5671257 5671402 -79767078 + MIR SINE MIR 94 238 -24 202 320 96 32 chr17 5671990 5672209 -79766271 - L3 LINE CR1 -56 1521 1289 446 273 103 56 chr17 5672355 5672438 -79766042 + MLT1H LTR MaLR 25 103 -446 2255 85 0 10 chr17 5672438 5672731 -79765749 - AluSg SINE Alu -20 290 1 446 273 103 56 chr17 5672731 5673100 -79765380 + MLT1H LTR MaLR 103 543 -6 286 318 95 24 chr17 5673174 5673300 -79765180 + MIR3 SINE MIR 49 183 -25 2049 125 0 3 chr17 5673727 5674014 -79764466 - AluSx SINE Alu -26 286 1 231 308 53 24 chr17 5674339 5674508 -79763972 + L1MDa LINE L1 1534 1707 -4833 196 213 128 0 chr17 5674543 5674590 -79763890 - L2 LINE L2 0 3313 3261 282 114 10 44 chr17 5675462 5675514 -79762966 - MLT2C1 LTR ERVL 0 520 347 2450 150 61 74 chr17 5675589 5675698 -79762782 + LTR44 LTR ERV1 1 110 -409 2339 88 7 13 chr17 5675698 5676005 -79762475 - AluSx SINE Alu -7 305 1 2450 150 61 74 chr17 5676005 5676421 -79762059 + LTR44 LTR ERV1 110 519 0 2384 160 15 75 chr17 5677378 5677915 -79760565 + LTR57-int LTR ERVL 311 815 -4528 557 132 142 0 chr17 5677915 5678021 -79760459 + LTR49-int LTR ERV1 951 1071 -7049 * 785 235 53 30 chr17 5677981 5678245 -79760235 + LTR57-int LTR ERVL 1322 1591 -3752 * 1813 179 28 37 chr17 5678011 5678448 -79760032 + LTR49-int LTR ERV1 1317 1749 -6371 1316 171 100 150 chr17 5678460 5679282 -79759198 + LTR49-int LTR ERV1 2950 3730 -2868 2234 219 100 52 chr17 5679354 5679803 -79758677 + LTR49-int LTR ERV1 2477 2903 -3335 244 33 0 0 chr17 5679803 5679833 -79758647 - MADE1 DNA Mariner 0 80 51 2234 219 100 52 chr17 5679833 5680228 -79758252 + LTR49-int LTR ERV1 2903 3278 -2960 1868 141 0 14 chr17 5680228 5680518 -79757962 - AluSx SINE Alu -14 298 13 2234 219 100 52 chr17 5680518 5680914 -79757566 + LTR49-int LTR ERV1 3278 4964 -1274 2798 135 59 43 chr17 5681183 5681280 -79757200 + LTR44 LTR ERV1 1 95 -424 2554 54 0 0 chr17 5681280 5681576 -79756904 - AluY SINE Alu -15 296 1 2798 135 59 43 chr17 5681576 5681989 -79756491 + LTR44 LTR ERV1 95 519 0 1700 210 25 6 chr17 5681995 5682348 -79756132 - MLT2D LTR ERVL -54 360 1 2369 69 24 0 chr17 5682577 5682867 -79755613 + AluSc SINE Alu 1 297 -12 492 303 154 0 chr17 5682903 5683111 -79755369 - MIR SINE MIR -21 241 2 242 239 80 11 chr17 5683461 5683549 -79754931 - L2 LINE L2 -42 3230 3137 609 254 71 61 chr17 5683587 5683653 -79754827 - LTR16C LTR ERVL -28 463 399 2219 107 0 26 chr17 5683653 5683963 -79754517 + AluSx SINE Alu 1 302 -10 609 254 71 61 chr17 5683963 5684176 -79754304 - LTR16C LTR ERVL -92 399 181 2233 104 0 3 chr17 5684865 5685162 -79753318 - AluSq SINE Alu -4 309 14 362 299 21 36 chr17 5685258 5685452 -79753028 - L2 LINE L2 -2075 1239 1049 21 0 0 0 chr17 5685831 5685852 -79752628 + AT_rich Low_complexity Low_complexity 1 21 0 2578 62 0 0 chr17 5686363 5686672 -79751808 - AluY SINE Alu -2 309 1 575 171 117 0 chr17 5686744 5686855 -79751625 - MSTA LTR MaLR 0 428 305 3398 116 40 78 chr17 5686861 5687493 -79750987 - LTR1 LTR ERV1 0 785 178 29 47 0 0 chr17 5687523 5687566 -79750914 + AT_rich Low_complexity Low_complexity 1 43 0 330 86 32 75 chr17 5687583 5687769 -79750711 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 * 348 111 64 23 chr17 5687728 5687899 -79750581 + (TA)n Simple_repeat Simple_repeat 1 178 0 210 235 12 25 chr17 5687900 5687981 -79750499 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 211 74 56 68 chr17 5687994 5688156 -79750324 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2069 183 112 9 chr17 5688156 5689196 -79749284 - SATR1 Satellite Satellite -5 1147 1 1950 103 0 4 chr17 5689196 5689448 -79749032 - AluSq SINE Alu -62 251 1 1647 138 0 66 chr17 5689457 5689772 -79748708 - AluSg SINE Alu 0 310 20 935 128 78 11 chr17 5689780 5689960 -79748520 - LTR1 LTR ERV1 -593 192 1 1554 136 23 58 chr17 5689960 5690268 -79748212 - MSTA LTR MaLR -131 297 1 258 32 0 0 chr17 5690311 5690342 -79748138 + (TG)n Simple_repeat Simple_repeat 2 32 0 856 299 60 20 chr17 5690355 5691356 -79747124 - L1MC4a LINE L1 -529 5710 4957 1361 226 14 44 chr17 5691527 5691890 -79746590 - MLT1A1 LTR MaLR 0 365 14 1827 126 58 3 chr17 5692008 5692301 -79746179 - AluSx SINE Alu -3 309 1 665 97 0 124 chr17 5692402 5692547 -79745933 - AluY SINE Alu 0 311 185 980 308 128 22 chr17 5692548 5693460 -79745020 - L1MC4a LINE L1 -4326 2070 1062 2053 128 3 0 chr17 5693483 5693781 -79744699 - AluY SINE Alu -12 299 1 29 0 0 0 chr17 5694222 5694251 -79744229 + AT_rich Low_complexity Low_complexity 1 29 0 1672 120 89 0 chr17 5694251 5694509 -79743971 - L1PB3 LINE L1 -7 6147 5867 528 329 80 41 chr17 5694674 5695770 -79742710 - L1M4 LINE L1 -1872 4274 3136 392 167 14 14 chr17 5696241 5696313 -79742167 - MER68 LTR ERV1 -227 335 264 2158 117 0 0 chr17 5696904 5697204 -79741276 - AluSx SINE Alu -12 300 1 2765 195 19 35 chr17 5697401 5697971 -79740509 - MER68 LTR ERV1 0 562 2 2427 68 0 0 chr17 5698384 5698694 -79739786 - AluY SINE Alu -1 310 1 524 348 51 20 chr17 5698705 5699001 -79739479 + L2 LINE L2 2186 2490 -824 410 207 112 17 chr17 5699017 5699133 -79739347 - MLT1H LTR MaLR -2 547 421 496 293 122 11 chr17 5699150 5699338 -79739142 - MLT1H LTR MaLR -328 221 13 295 367 103 33 chr17 5699379 5699909 -79738571 + L2 LINE L2 2549 3129 -143 636 181 0 0 chr17 5699978 5700083 -79738397 + MER58B DNA MER1_type 225 329 -12 1149 218 5 0 chr17 5700809 5701020 -79737460 + MER58A DNA MER1_type 1 212 -12 756 115 0 44 chr17 5702446 5702559 -79735921 - AluSg/x SINE Alu -27 285 178 300 292 0 34 chr17 5702564 5702653 -79735827 + MIR SINE MIR 106 191 -71 2155 107 0 7 chr17 5702750 5703049 -79735431 - AluSx SINE Alu -15 297 1 1622 148 0 21 chr17 5703925 5704209 -79734271 - AluSc SINE Alu -3 306 29 305 302 87 8 chr17 5705081 5705207 -79733273 + MIR3 SINE MIR 69 204 -4 1033 49 18 18 chr17 5705336 5705499 -79732981 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 337 130 43 0 chr17 5705507 5705576 -79732904 + CT-rich Low_complexity Low_complexity 2 73 0 1781 173 3 25 chr17 5705576 5705894 -79732586 - AluJo SINE Alu -1 311 1 603 363 116 3 chr17 5706215 5706604 -79731876 - L3 LINE CR1 -1 1576 1144 368 289 134 34 chr17 5706869 5707018 -79731462 - MIR3 SINE MIR -11 197 34 411 327 61 6 chr17 5707676 5707841 -79730639 + MIR SINE MIR 33 206 -56 560 200 9 0 chr17 5708012 5708122 -79730358 - MIR SINE MIR 0 262 152 1218 178 22 18 chr17 5708123 5708348 -79730132 + MER46A DNA MER2_type 3 228 -8 280 290 120 0 chr17 5708354 5708454 -79730026 - MIR SINE MIR -108 154 43 334 311 114 0 chr17 5708502 5708598 -79729882 - HAL1 LINE L1 -1016 1491 1375 2241 103 3 0 chr17 5708598 5708910 -79729570 - AluSp SINE Alu 0 313 1 334 311 114 0 chr17 5708910 5708945 -79729535 - HAL1 LINE L1 -1132 1375 1345 331 320 61 30 chr17 5708947 5709310 -79729170 - L1MEd LINE L1 -4886 1233 860 2089 131 0 6 chr17 5709854 5710168 -79728312 - AluSx SINE Alu 0 312 1 32 43 0 0 chr17 5710269 5710315 -79728165 + AT_rich Low_complexity Low_complexity 1 46 0 2058 97 0 58 chr17 5710517 5710847 -79727633 - AluSx SINE Alu -1 311 1 188 67 33 0 chr17 5712271 5712301 -79726179 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2178 79 10 0 chr17 5712303 5712593 -79725887 - AluSp SINE Alu -20 293 1 189 0 0 0 chr17 5713034 5713055 -79725425 + (T)n Simple_repeat Simple_repeat 1 21 0 944 191 46 128 chr17 5713577 5713750 -79724730 + MLT1B LTR MaLR 2 187 -203 2107 84 16 26 chr17 5713750 5714059 -79724421 + AluY SINE Alu 1 306 -5 944 191 46 128 chr17 5714059 5714179 -79724301 + MLT1B LTR MaLR 187 266 -124 1907 127 21 3 chr17 5714179 5714470 -79724010 + AluSx SINE Alu 1 296 -16 944 191 46 128 chr17 5714470 5714520 -79723960 + MLT1B LTR MaLR 266 318 -72 330 306 61 16 chr17 5714721 5714869 -79723611 - MIR SINE MIR -61 147 33 321 152 0 0 chr17 5717865 5717911 -79720569 + MER46A DNA MER2_type 1 46 -190 674 241 99 112 chr17 5718547 5719011 -79719469 + LTR33A LTR ERVL 66 523 0 356 298 158 14 chr17 5719077 5719439 -79719041 + L2 LINE L2 2460 2873 -441 2144 110 3 0 chr17 5719521 5719821 -79718659 - AluSx SINE Alu -11 301 1 542 365 36 18 chr17 5719853 5720130 -79718350 + L2 LINE L2 2966 3247 -25 919 148 228 0 chr17 5720844 5721033 -79717447 + MER46A DNA MER2_type 1 232 -4 1257 245 52 16 chr17 5721103 5721449 -79717031 + L1MD2 LINE L1 5978 6339 -20 2119 104 3 0 chr17 5721449 5721738 -79716742 - AluSg SINE Alu -20 290 1 1257 245 52 16 chr17 5721738 5721759 -79716721 + L1MD2 LINE L1 6339 6358 -1 459 152 0 0 chr17 5722527 5722606 -79715874 + (TG)n Simple_repeat Simple_repeat 1 79 0 302 323 57 31 chr17 5722783 5722975 -79715505 + MIR3 SINE MIR 1 197 -11 710 294 97 32 chr17 5723190 5723499 -79714981 - L3 LINE CR1 -106 1471 1143 2445 77 3 0 chr17 5723506 5723816 -79714664 - AluSp SINE Alu -2 311 1 237 292 52 0 chr17 5724123 5724219 -79714261 - L1ME LINE L1 -331 5790 5690 354 258 116 32 chr17 5724486 5724641 -79713839 + MIR SINE MIR 1 168 -94 1668 220 108 7 chr17 5724671 5725116 -79713364 - MLT1D LTR MaLR 0 505 16 1363 247 105 70 chr17 5725147 5725747 -79712733 + L2 LINE L2 2110 2730 -584 306 118 0 0 chr17 5726492 5726543 -79711937 - L1MB2 LINE L1 -1 6170 6120 1990 124 7 13 chr17 5726543 5726842 -79711638 - AluSq SINE Alu -16 297 1 362 297 120 0 chr17 5727783 5727958 -79710522 + MIR SINE MIR 51 246 -16 5105 56 0 0 chr17 5728372 5728993 -79709487 - L1PA8 LINE L1 0 6172 5552 180 250 0 0 chr17 5729087 5729123 -79709357 - MIR SINE MIR -70 192 157 375 23 0 0 chr17 5729280 5729324 -79709156 + (CA)n Simple_repeat Simple_repeat 2 45 0 1766 195 74 39 chr17 5729629 5729897 -79708583 - MLT1D LTR MaLR -4 501 209 204 67 0 0 chr17 5729897 5729927 -79708553 + (CACAT)n Simple_repeat Simple_repeat 4 33 0 1766 195 74 39 chr17 5729927 5730120 -79708360 - MLT1D LTR MaLR -296 209 24 253 247 47 47 chr17 5730363 5730448 -79708032 + ERVL LTR ERVL 3427 3511 -2253 2485 203 30 18 chr17 5730608 5731110 -79707370 - LTR40a LTR ERVL -4 515 8 212 149 257 40 chr17 5731172 5731246 -79707234 - MIR SINE MIR -66 196 107 684 320 44 55 chr17 5731301 5731484 -79706996 + ERVL LTR ERVL 4302 4485 -1279 2000 109 35 0 chr17 5731484 5731769 -79706711 - AluSp SINE Alu -18 295 1 684 320 44 55 chr17 5731769 5732041 -79706439 + ERVL LTR ERVL 4485 4752 -1012 378 241 23 11 chr17 5732103 5732190 -79706290 + ERVL LTR ERVL 4894 4981 -783 1939 144 0 0 chr17 5732694 5733000 -79705480 - AluSx SINE Alu -6 306 1 2205 92 0 13 chr17 5733119 5733425 -79705055 - AluSq SINE Alu -11 302 1 3316 152 29 15 chr17 5734014 5734285 -79704195 + L1MB3 LINE L1 5562 5828 -355 2262 95 0 3 chr17 5734285 5734590 -79703890 + AluSq SINE Alu 1 304 -9 3316 152 29 15 chr17 5734590 5734931 -79703549 + L1MB3 LINE L1 5828 6183 0 2121 124 0 3 chr17 5734942 5735256 -79703224 + AluSq SINE Alu 1 313 0 207 353 35 0 chr17 5735836 5735921 -79702559 + MIR SINE MIR 62 149 -59 186 80 9 0 chr17 5736640 5736715 -79701765 + (A)n Simple_repeat Simple_repeat 1 30 0 268 200 67 40 chr17 5736965 5737040 -79701440 - MER5B DNA MER1_type -101 77 1 381 307 200 5 chr17 5738122 5738327 -79700153 + MIR SINE MIR 17 261 -1 882 292 41 55 chr17 5738441 5738879 -79699601 + MLT1K LTR MaLR 140 571 -17 2110 110 0 0 chr17 5739875 5740175 -79698305 + AluY SINE Alu 1 300 -11 2172 124 51 28 chr17 5740481 5740837 -79697643 + THE1B LTR MaLR 1 364 0 2155 115 3 7 chr17 5742363 5742658 -79695822 - AluSq SINE Alu -19 294 1 353 282 147 29 chr17 5742836 5742957 -79695523 - MIR SINE MIR -70 192 44 2482 193 107 4 chr17 5742957 5743374 -79695106 - MLT1F1 LTR MaLR 0 567 86 198 0 0 0 chr17 5743374 5743396 -79695084 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 2482 193 107 4 chr17 5743396 5743492 -79694988 - MLT1F1 LTR MaLR -481 86 1 353 282 147 29 chr17 5743492 5743540 -79694940 - MIR SINE MIR -218 44 3 290 317 138 17 chr17 5743952 5744311 -79694169 + L2 LINE L2 2644 3043 -229 189 0 0 0 chr17 5745580 5745601 -79692879 + (T)n Simple_repeat Simple_repeat 1 21 0 581 256 93 6 chr17 5745849 5746021 -79692459 - LTR33A LTR ERVL -40 483 297 208 316 26 0 chr17 5746240 5746316 -79692164 - L2 LINE L2 -633 2681 2604 767 230 7 0 chr17 5746322 5746474 -79692006 - MLT1E LTR MaLR -8 585 433 448 191 101 0 chr17 5746531 5746620 -79691860 - MLT1E1 LTR MaLR -556 98 1 360 165 24 24 chr17 5746620 5746705 -79691775 - L2 LINE L2 -704 2610 2526 2238 113 0 3 chr17 5747331 5747624 -79690856 - AluSq SINE Alu -17 296 5 375 325 132 8 chr17 5747729 5747845 -79690635 - L2 LINE L2 -337 2977 2877 2025 127 0 17 chr17 5747845 5748145 -79690335 + AluSq SINE Alu 1 295 -18 375 325 132 8 chr17 5748145 5748271 -79690209 - L2 LINE L2 -437 2877 2705 2402 90 0 3 chr17 5749395 5749695 -79688785 - AluSx SINE Alu -13 299 1 380 222 32 56 chr17 5749751 5749774 -79688706 - MIR SINE MIR -131 131 109 2068 211 132 9 chr17 5749774 5750304 -79688176 + MLT1G1 LTR MaLR 1 595 0 380 222 32 56 chr17 5750304 5750406 -79688074 - MIR SINE MIR -153 109 9 183 231 58 0 chr17 5750407 5750459 -79688021 + MIR SINE MIR 194 248 -14 241 317 0 0 chr17 5751248 5751308 -79687172 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 639 251 112 27 chr17 5751315 5751538 -79686942 + MIR SINE MIR 1 242 -20 2046 142 0 40 chr17 5751745 5752068 -79686412 - AluSx SINE Alu -2 310 1 191 233 194 0 chr17 5752135 5752238 -79686242 - MIR SINE MIR -69 193 71 2288 116 0 0 chr17 5752869 5753170 -79685310 - AluSx SINE Alu -11 301 1 2392 97 3 0 chr17 5753405 5753705 -79684775 - AluSp SINE Alu -12 301 1 1438 217 32 32 chr17 5753734 5754075 -79684405 - MER58B DNA MER1_type 0 341 1 1444 43 0 32 chr17 5754452 5754639 -79683841 - L1PA8 LINE L1 -400 5772 5592 2871 71 15 18 chr17 5754639 5755030 -79683450 + L1PA8 LINE L1 5779 6170 -2 24 32 0 0 chr17 5755824 5755855 -79682625 + AT_rich Low_complexity Low_complexity 1 31 0 649 305 102 24 chr17 5756094 5756514 -79681966 + MLT1K LTR MaLR 101 553 -35 207 0 0 0 chr17 5756975 5756998 -79681482 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 248 77 26 0 chr17 5757279 5757318 -79681162 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 8224 194 33 26 chr17 5757328 5759560 -79678920 - L1MC1 LINE L1 -7 6326 4111 2424 61 3 14 chr17 5759560 5759857 -79678623 - AluY SINE Alu -17 294 1 8224 194 33 26 chr17 5759857 5760153 -79678327 - L1MC1 LINE L1 -2222 4111 3819 2488 62 7 7 chr17 5760153 5760460 -79678020 - AluY SINE Alu -4 307 1 8224 194 33 26 chr17 5760460 5761086 -79677394 - L1MC1 LINE L1 -2514 3819 3153 2398 212 11 6 chr17 5761354 5761902 -79676578 + L1 LINE L1 4242 4792 -1354 22 70 0 0 chr17 5761924 5761967 -79676513 + AT_rich Low_complexity Low_complexity 1 43 0 4801 79 5 2 chr17 5761967 5762603 -79675877 - L1PB1 LINE L1 0 6151 5514 394 223 90 42 chr17 5762605 5762771 -79675709 - MLT1D LTR MaLR -219 286 113 916 197 112 5 chr17 5762838 5763017 -79675463 + MSTA LTR MaLR 1 202 -226 1971 98 52 38 chr17 5763017 5763304 -79675176 + AluSx SINE Alu 1 291 -21 2445 102 0 0 chr17 5763314 5763656 -79674824 - L1P LINE L1 -3154 2992 2651 4416 33 0 0 chr17 5763656 5764167 -79674313 + L1PA7 LINE L1 5642 6154 0 1228 159 100 9 chr17 5764171 5764391 -79674089 + MSTA LTR MaLR 187 426 -2 936 203 95 0 chr17 5764411 5764652 -79673828 + L1MA4 LINE L1 6036 6299 -1 1869 137 48 0 chr17 5764684 5764976 -79673504 + AluSp SINE Alu 1 306 -7 2298 118 0 9 chr17 5765714 5766029 -79672451 + AluSx SINE Alu 1 312 0 1919 233 99 8 chr17 5767723 5768229 -79670251 - MLT1H1 LTR MaLR 0 555 4 307 293 47 0 chr17 5768356 5768462 -79670018 + MIR SINE MIR 118 228 -34 305 200 128 124 chr17 5768552 5768802 -79669678 - MER112 DNA MER1_type -9 251 1 257 185 46 169 chr17 5769567 5769762 -79668718 + MLT1K LTR MaLR 408 578 -10 505 239 104 54 chr17 5770778 5771000 -79667480 + MER112 DNA MER1_type 3 235 -25 320 325 62 44 chr17 5771058 5771475 -79667005 - L2 LINE L2 -218 3054 2623 231 280 40 103 chr17 5771526 5771701 -79666779 - MER91A DNA MER1_type -32 164 1 207 303 71 10 chr17 5773114 5773213 -79665267 - MIR SINE MIR -130 132 28 1705 193 58 28 chr17 5774311 5774552 -79663928 + MLT1C LTR MaLR 22 281 -186 1668 102 0 4 chr17 5774552 5774777 -79663703 + AluSq SINE Alu 86 309 -4 1705 193 58 28 chr17 5774777 5774928 -79663552 + MLT1C LTR MaLR 281 426 -41 2269 95 6 25 chr17 5775620 5775935 -79662545 - AluSx SINE Alu -1 311 3 1415 218 51 9 chr17 5776753 5777069 -79661411 + Charlie1a DNA MER1_type 14 342 -1113 2033 67 0 0 chr17 5777085 5777355 -79661125 + AluY SINE Alu 44 313 0 1481 213 45 3 chr17 5777355 5777669 -79660811 - Charlie1a DNA MER1_type -1115 340 14 4380 185 102 18 chr17 5778066 5779107 -79659373 + Charlie1a DNA MER1_type 327 1454 -1 2001 137 42 70 chr17 5779476 5779642 -79658838 + MLT1B LTR MaLR 1 170 -220 2561 65 0 3 chr17 5779642 5779949 -79658531 + AluY SINE Alu 1 306 -5 2001 137 42 70 chr17 5779949 5780183 -79658297 + MLT1B LTR MaLR 170 390 0 1242 200 19 0 chr17 5780517 5780777 -79657703 + MER33 DNA MER1_type 1 265 -59 5277 147 39 4 chr17 5780782 5781814 -79656666 + L1PA8 LINE L1 5111 6174 0 2237 124 8 39 chr17 5781814 5782068 -79656412 + L1PA16 LINE L1 5778 6017 -149 2099 170 75 12 chr17 5782068 5782467 -79656013 + MSTB LTR MaLR 3 426 0 2237 124 8 39 chr17 5782467 5782599 -79655881 + L1PA16 LINE L1 6017 6152 -14 2373 69 0 39 chr17 5783059 5783365 -79655115 - AluYa5 SINE Alu -16 295 2 892 247 11 0 chr17 5783493 5783679 -79654801 + MER5A DNA MER1_type 1 188 -1 884 45 18 0 chr17 5783992 5784104 -79654376 + L1PA5 LINE L1 6039 6152 -2 290 186 29 20 chr17 5784426 5784528 -79653952 + CT-rich Low_complexity Low_complexity 2 104 0 329 250 12 12 chr17 5784579 5784663 -79653817 - MIR SINE MIR -21 241 158 546 206 66 0 chr17 5784767 5784900 -79653580 - MIR SINE MIR -52 156 17 1534 197 14 17 chr17 5785300 5785661 -79652819 + L1P LINE L1 4984 5343 -803 3231 233 36 17 chr17 5786169 5787075 -79651405 - L1ME1 LINE L1 -61 6900 5986 915 138 22 2 chr17 5787075 5787235 -79651245 + L1PB1 LINE L1 5989 6154 0 2451 253 95 29 chr17 5787249 5788685 -79649795 - L1ME1 LINE L1 -954 5987 4387 1312 233 75 30 chr17 5788710 5789233 -79649247 - L1ME1 LINE L1 -3526 3415 2897 6761 244 30 22 chr17 5789680 5790064 -79648416 - L1ME1 LINE L1 -4176 2946 2566 2001 98 4 4 chr17 5790064 5790330 -79648150 - AluSc SINE Alu -13 296 31 6761 244 30 22 chr17 5790330 5792683 -79645797 - L1ME1 LINE L1 -4556 2566 1 1416 224 139 91 chr17 5792781 5793299 -79645181 - MLT1G1 LTR MaLR 0 595 53 1435 172 0 48 chr17 5793300 5793403 -79645077 + AluJb SINE Alu 37 143 -169 1990 114 31 0 chr17 5793403 5793693 -79644787 + AluSq SINE Alu 1 299 -14 596 38 13 0 chr17 5793693 5793772 -79644708 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 1435 172 0 48 chr17 5793772 5793957 -79644523 + AluJb SINE Alu 141 312 0 344 127 16 32 chr17 5793965 5794028 -79644452 - MLT1G1 LTR MaLR -533 62 1 679 296 22 30 chr17 5794327 5794557 -79643923 + MIR SINE MIR 28 255 -7 2107 101 0 3 chr17 5794558 5794846 -79643634 - AluSx SINE Alu -12 300 14 188 387 54 0 chr17 5795103 5795196 -79643284 - MIR SINE MIR -128 134 37 1141 124 0 17 chr17 5795555 5795733 -79642747 - AluSg/x SINE Alu -1 311 137 2331 60 0 3 chr17 5796167 5796478 -79642002 + AluSp SINE Alu 1 310 0 261 326 45 0 chr17 5796872 5796961 -79641519 + MIR SINE MIR 47 139 -69 2862 141 22 13 chr17 5797681 5797786 -79640694 + LTR24 LTR ERV1 10 113 -354 2158 95 24 0 chr17 5797786 5798081 -79640399 - AluSp SINE Alu -11 302 1 2862 141 22 13 chr17 5798081 5798429 -79640051 + LTR24 LTR ERV1 113 467 0 387 276 55 31 chr17 5798449 5798612 -79639868 - L1ME3 LINE L1 -1 6161 5995 321 130 0 0 chr17 5798613 5798659 -79639821 - L1PA5 LINE L1 -202 5952 5907 * 1751 76 25 4 chr17 5798632 5798869 -79639611 + L1PA4 LINE L1 5914 6155 0 264 240 39 19 chr17 5799378 5799482 -79638998 - L1ME3 LINE L1 -58 6104 5999 2204 84 19 0 chr17 5799719 5800109 -79638371 - L1M3 LINE L1 -581 5602 5201 1508 71 0 15 chr17 5800109 5800305 -79638175 + L1PA8 LINE L1 5973 6166 -6 798 188 17 33 chr17 5800308 5800489 -79637991 - L1MC3 LINE L1 -6 7779 7602 * 3995 189 38 6 chr17 5800488 5800934 -79637546 - L1MC3 LINE L1 -457 7328 6845 252 0 0 0 chr17 5800934 5800962 -79637518 + (TG)n Simple_repeat Simple_repeat 2 29 0 3995 189 38 6 chr17 5800962 5801296 -79637184 - L1MC3 LINE L1 -940 6845 6523 588 136 48 0 chr17 5801321 5801424 -79637056 + FRAM SINE Alu 69 176 0 319 148 0 0 chr17 5801428 5801482 -79636998 - L1MC3 LINE L1 -1635 6150 6097 2615 193 105 15 chr17 5801486 5801843 -79636637 - L1MC3 LINE L1 -1265 6520 6197 2084 106 3 3 chr17 5801843 5802135 -79636345 - AluSx SINE Alu -20 292 1 2615 193 105 15 chr17 5802135 5802166 -79636314 - L1MC3 LINE L1 -1588 6197 6170 1458 186 29 11 chr17 5802166 5802440 -79636040 + AluJo SINE Alu 1 279 -33 2615 193 105 15 chr17 5802440 5802728 -79635752 - L1MC3 LINE L1 -1615 6170 5782 2470 173 22 88 chr17 5802737 5802959 -79635521 - MER44D DNA MER2_type -1890 597 362 2051 93 3 45 chr17 5802959 5803270 -79635210 - AluY SINE Alu -13 298 1 2470 173 22 88 chr17 5803270 5803625 -79634855 - MER44D DNA MER2_type -2125 362 3 849 141 4 40 chr17 5803626 5803808 -79634672 - L1MC3 LINE L1 -560 5784 5606 2193 100 0 6 chr17 5803816 5804127 -79634353 + AluSq SINE Alu 5 313 0 5610 243 31 47 chr17 5804135 5804712 -79633768 - L1MC3 LINE L1 -8 7777 7193 2099 124 0 0 chr17 5804712 5805019 -79633461 - AluSx SINE Alu -5 307 1 5610 243 31 47 chr17 5805019 5806193 -79632287 - L1MC3 LINE L1 -592 7193 6053 771 250 72 19 chr17 5806210 5806474 -79632006 - L1ME3A LINE L1 -229 5941 5664 315 283 142 25 chr17 5806513 5806633 -79631847 - L1MEd LINE L1 -5967 152 19 188 353 25 49 chr17 5806706 5806828 -79631652 - MIR3 SINE MIR -75 133 15 224 303 0 15 chr17 5807053 5807119 -79631361 + GA-rich Low_complexity Low_complexity 1 65 0 664 311 78 91 chr17 5809074 5809181 -79629299 + L1M4 LINE L1 2142 2249 -3897 2126 103 7 3 chr17 5809181 5809483 -79628997 + AluSx SINE Alu 1 303 -9 664 311 78 91 chr17 5809483 5810179 -79628301 + L1M4 LINE L1 2249 2935 -3211 2029 71 0 15 chr17 5810192 5810459 -79628021 + AluY SINE Alu 1 263 -48 186 43 0 0 chr17 5810468 5810491 -79627989 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2072 129 0 0 chr17 5810515 5810809 -79627671 + AluSx SINE Alu 1 294 -18 711 325 57 61 chr17 5810813 5811238 -79627242 + L1M4 LINE L1 2956 3378 -2768 280 309 135 39 chr17 5811350 5811415 -79627065 + L2 LINE L2 922 979 -2335 2231 77 3 3 chr17 5811415 5811713 -79626767 - AluY SINE Alu -13 298 1 280 309 135 39 chr17 5811713 5811906 -79626574 + L2 LINE L2 979 1205 -2109 1572 224 132 50 chr17 5812073 5812574 -79625906 + MLT1F LTR MaLR 1 542 0 225 0 0 0 chr17 5812844 5812869 -79625611 + (TG)n Simple_repeat Simple_repeat 2 26 0 452 314 32 11 chr17 5812880 5813068 -79625412 - L1MC4 LINE L1 -130 7912 7721 714 179 0 0 chr17 5813504 5813621 -79624859 - AluJb SINE Alu -194 118 2 1107 228 104 31 chr17 5813760 5814146 -79624334 - L1MC4 LINE L1 -466 7576 7163 22 0 0 0 chr17 5814770 5814792 -79623688 + AT_rich Low_complexity Low_complexity 1 22 0 531 239 18 0 chr17 5815302 5815411 -79623069 - MER81 DNA DNA -3 111 1 201 74 0 0 chr17 5815685 5815712 -79622768 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 299 69 11 chr17 5815714 5815801 -79622679 + L2 LINE L2 1874 1965 -1349 383 259 36 67 chr17 5815803 5816027 -79622453 + L1M4 LINE L1 4229 4445 -1701 856 217 28 0 chr17 5816047 5816227 -79622253 - MER5A DNA MER1_type -4 185 1 461 309 130 30 chr17 5816274 5816743 -79621737 + L2 LINE L2 1982 2497 -817 422 304 8 16 chr17 5817318 5817443 -79621037 + MIR3 SINE MIR 82 205 -3 207 0 0 0 chr17 5817819 5817842 -79620638 + (CA)n Simple_repeat Simple_repeat 2 24 0 1929 212 28 42 chr17 5818129 5818323 -79620157 - L1ME2 LINE L1 -108 6056 5861 1924 131 3 13 chr17 5818323 5818629 -79619851 + AluSq SINE Alu 3 305 -8 1929 212 28 42 chr17 5818629 5818935 -79619545 - L1ME2 LINE L1 -303 5861 5563 199 279 295 23 chr17 5819472 5819601 -79618879 - MIR3 SINE MIR -29 179 16 3558 128 60 15 chr17 5819732 5820316 -79618164 - LTR31 LTR ERV1 -9 610 1 844 171 0 0 chr17 5821448 5821588 -79616892 - LTR31 LTR ERV1 -111 508 369 196 318 30 0 chr17 5822692 5822758 -79615722 - MIR3 SINE MIR -24 184 117 547 209 62 16 chr17 5823359 5823488 -79614992 - Tigger1 DNA MER2_type 0 2418 2284 2648 244 105 45 chr17 5823488 5824576 -79613904 - L1ME3 LINE L1 -275 5887 4866 180 0 0 0 chr17 5824576 5824596 -79613884 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2648 244 105 45 chr17 5824596 5824635 -79613845 - L1ME3 LINE L1 -1296 4866 4831 2770 10 0 0 chr17 5824635 5824946 -79613534 - AluYa5 SINE Alu 0 311 1 2648 244 105 45 chr17 5824946 5825652 -79612828 - L1ME3 LINE L1 -1331 4831 3923 1931 125 11 0 chr17 5825652 5825973 -79612507 + AluSx SINE Alu 1 324 0 2648 244 105 45 chr17 5825973 5826040 -79612440 - L1ME3 LINE L1 -2239 3923 3861 2115 109 3 13 chr17 5826972 5827259 -79611221 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr17 5827259 5827282 -79611198 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2115 109 3 13 chr17 5827282 5827307 -79611173 + AluSg SINE Alu 286 310 0 420 20 0 0 chr17 5828233 5828282 -79610198 + (TG)n Simple_repeat Simple_repeat 1 49 0 243 61 0 0 chr17 5828282 5828315 -79610165 + (TGG)n Simple_repeat Simple_repeat 3 35 0 289 309 90 51 chr17 5828315 5828626 -79609854 - L2 LINE L2 -337 2977 2655 275 275 297 0 chr17 5828602 5828666 -79609814 + MER5A DNA MER1_type 11 55 -134 * 2614 81 23 3 chr17 5828666 5829014 -79609466 - THE1A LTR MaLR 0 355 1 275 275 297 0 chr17 5829014 5829087 -79609393 + MER5A DNA MER1_type 55 189 0 213 362 26 9 chr17 5829116 5829232 -79609248 - L2 LINE L2 -639 2675 2558 276 233 93 35 chr17 5830353 5830439 -79608041 - L2 LINE L2 -40 3232 3142 225 298 54 127 chr17 5830798 5831184 -79607296 - L2 LINE L2 -94 3178 2821 193 332 142 40 chr17 5831717 5831970 -79606510 - L2 LINE L2 -99 3173 2895 644 204 0 0 chr17 5831999 5832112 -79606368 + Charlie3 DNA MER1_type 1 113 -2597 1962 126 0 16 chr17 5832112 5832429 -79606051 - AluSx SINE Alu 0 312 1 1651 274 88 32 chr17 5832440 5832791 -79605689 - L2 LINE L2 -243 3070 2740 2092 107 24 0 chr17 5832791 5833081 -79605399 + AluSx SINE Alu 1 297 -15 1651 274 88 32 chr17 5833081 5833438 -79605042 - L2 LINE L2 -573 2740 2316 643 290 71 25 chr17 5833773 5833914 -79604566 + MIR SINE MIR 4 162 -100 1317 145 114 77 chr17 5833914 5834266 -79604214 - MLT1A1 LTR MaLR 0 365 1 643 290 71 25 chr17 5834266 5834362 -79604118 + MIR SINE MIR 162 252 -10 2058 121 3 0 chr17 5834393 5834690 -79603790 - AluSq SINE Alu -15 298 1 376 236 13 66 chr17 5835429 5835586 -79602894 + MIR SINE MIR 2 147 -65 1786 170 61 86 chr17 5836081 5836331 -79602149 - MSTB LTR MaLR -7 419 183 2196 101 0 3 chr17 5836331 5836628 -79601852 - AluSx SINE Alu -16 296 1 1786 170 61 86 chr17 5836628 5836806 -79601674 - MSTB LTR MaLR -243 183 2 213 220 51 17 chr17 5837291 5837350 -79601130 - MIR SINE MIR -109 153 93 584 317 58 24 chr17 5838126 5838331 -79600149 - MIR SINE MIR -23 239 28 1894 112 0 0 chr17 5838363 5838631 -79599849 - AluSc SINE Alu 0 309 42 209 238 16 48 chr17 5838974 5839037 -79599443 - L2 LINE L2 -80 3192 3132 1579 225 71 88 chr17 5839179 5839744 -79598736 + MER68 LTR ERV1 2 556 -6 235 316 125 45 chr17 5839753 5840135 -79598345 - L2 LINE L2 -264 3008 2597 1254 151 18 18 chr17 5840370 5840588 -79597892 + MER20 DNA MER1_type 1 218 -1 850 194 15 63 chr17 5840598 5840804 -79597676 + MER3 DNA MER1_type 2 197 -12 534 299 0 7 chr17 5841520 5841667 -79596813 - MIR SINE MIR -95 167 22 2208 116 0 0 chr17 5841668 5841966 -79596514 - AluSx SINE Alu -28 284 1 749 226 26 15 chr17 5842594 5842789 -79595691 - MER117 DNA MER1_type 0 197 1 361 217 11 22 chr17 5842981 5843073 -79595407 - L3 LINE CR1 -97 1480 1390 2462 88 0 0 chr17 5843239 5843545 -79594935 + AluY SINE Alu 1 306 -5 324 250 105 24 chr17 5843586 5843710 -79594770 - L3 LINE CR1 -197 1380 1247 328 275 0 55 chr17 5843916 5844025 -79594455 - L2 LINE L2 -1 3271 3169 306 253 0 58 chr17 5844305 5844343 -79594137 - L1MC4 LINE L1 -1349 6693 6654 1932 114 3 50 chr17 5844343 5844670 -79593810 - AluSx SINE Alu 0 313 1 306 253 0 58 chr17 5844670 5844717 -79593763 - L1MC4 LINE L1 -1388 6654 6612 300 256 67 44 chr17 5844674 5844764 -79593716 + L1MC4 LINE L1 6614 6705 -1337 * 235 101 13 51 chr17 5844769 5844848 -79593632 + (TA)n Simple_repeat Simple_repeat 2 77 0 2233 167 38 38 chr17 5844850 5845353 -79593127 - L1MB4 LINE L1 -33 6147 5645 1765 176 38 32 chr17 5845417 5845801 -79592679 + MLT1B LTR MaLR 1 420 -8 21 0 0 0 chr17 5845863 5845884 -79592596 + AT_rich Low_complexity Low_complexity 1 21 0 794 173 0 0 chr17 5845933 5846066 -79592414 - FLAM_C SINE Alu 0 133 1 511 289 128 22 chr17 5846254 5846614 -79591866 - L1M4 LINE L1 -1242 4904 4507 22 0 0 0 chr17 5846630 5846652 -79591828 + AT_rich Low_complexity Low_complexity 1 22 0 721 315 43 40 chr17 5846834 5847055 -79591425 - L2 LINE L2 -567 2747 2523 2208 83 35 3 chr17 5847055 5847343 -79591137 + AluSg1 SINE Alu 1 297 -12 721 315 43 40 chr17 5847343 5847470 -79591010 - L2 LINE L2 -791 2523 2398 725 126 0 0 chr17 5848472 5848591 -79589889 + AluSg/x SINE Alu 193 311 -1 2225 116 7 3 chr17 5849790 5850092 -79588388 - AluSg SINE Alu -7 303 1 401 66 16 0 chr17 5850143 5850204 -79588276 + (GA)n Simple_repeat Simple_repeat 2 63 0 604 281 38 19 chr17 5850527 5850737 -79587743 - MIR SINE MIR -3 259 46 461 243 215 0 chr17 5850916 5851060 -79587420 - MER45A DNA AcHobo 0 178 4 946 140 21 0 chr17 5851407 5851574 -79586906 - AluSg/x SINE Alu 0 304 135 271 376 0 32 chr17 5852444 5852630 -79585850 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 282 294 39 0 chr17 5852543 5852645 -79585835 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 2029 123 34 3 chr17 5852724 5853016 -79585464 + AluSx SINE Alu 1 301 -11 303 242 78 47 chr17 5854726 5854854 -79583626 - L2 LINE L2 -7 3265 3134 246 183 0 0 chr17 5854990 5855047 -79583433 - MIR SINE MIR -65 143 96 393 22 0 0 chr17 5855124 5855170 -79583310 + (TG)n Simple_repeat Simple_repeat 2 47 0 2146 90 0 4 chr17 5855170 5855437 -79583043 - AluSq SINE Alu -26 287 22 527 261 55 12 chr17 5856036 5856201 -79582279 + MIR SINE MIR 47 218 -44 2459 56 0 0 chr17 5856513 5856885 -79581595 + AluY SINE Alu 1 372 0 1428 229 8 43 chr17 5857760 5858008 -79580472 + L1MD3 LINE L1 7634 7866 -129 2064 149 0 0 chr17 5858008 5858297 -79580183 + AluSx SINE Alu 1 289 -23 1428 229 8 43 chr17 5858297 5858420 -79580060 + L1MD3 LINE L1 7866 7992 -3 347 329 87 0 chr17 5859089 5859238 -79579242 - MIR3 SINE MIR -30 178 17 288 266 133 90 chr17 5860080 5860358 -79578122 - L2 LINE L2 -2 3311 3022 182 372 0 39 chr17 5860383 5860461 -79578019 + L3 LINE CR1 398 472 -1105 * 332 341 66 24 chr17 5860456 5860623 -79577857 - MIR SINE MIR 0 262 89 302 302 145 17 chr17 5860703 5860875 -79577605 + L3 LINE CR1 473 666 -911 356 318 55 28 chr17 5860920 5861137 -79577343 + L2 LINE L2 2836 3058 -214 384 40 0 0 chr17 5861178 5861228 -79577252 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 539 267 136 30 chr17 5861230 5861742 -79576738 + MLT1L LTR MaLR 10 615 0 180 354 154 15 chr17 5861777 5861907 -79576573 + L2 LINE L2 3124 3271 -1 603 244 60 0 chr17 5862825 5862993 -79575487 + MER45A DNA AcHobo 1 178 0 366 23 0 0 chr17 5863728 5863771 -79574709 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr17 5863770 5863793 -79574687 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 377 39 20 0 chr17 5864116 5864167 -79574313 + (TG)n Simple_repeat Simple_repeat 2 53 0 216 0 0 0 chr17 5864495 5864519 -79573961 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 94 0 0 chr17 5864585 5864649 -79573831 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr17 5864673 5864709 -79573771 + GC_rich Low_complexity Low_complexity 1 36 0 228 75 38 38 chr17 5864731 5864784 -79573696 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 231 245 9 38 chr17 5865155 5865261 -79573219 + G-rich Low_complexity Low_complexity 2 104 0 2087 151 3 6 chr17 5867694 5868006 -79570474 + AluSx SINE Alu 1 311 -1 318 299 19 0 chr17 5868242 5868349 -79570131 + MIR SINE MIR 78 186 -76 310 340 70 19 chr17 5870480 5870695 -79567785 + MIR SINE MIR 29 254 -8 241 286 103 40 chr17 5871243 5871369 -79567111 - L2 LINE L2 -1 3271 3138 2378 98 3 0 chr17 5871443 5871740 -79566740 - AluSc SINE Alu -11 298 1 422 370 65 27 chr17 5872533 5872871 -79565609 - L2 LINE L2 0 3272 2922 288 170 0 0 chr17 5872917 5872970 -79565510 + (TG)n Simple_repeat Simple_repeat 1 53 0 551 291 56 39 chr17 5872982 5873216 -79565264 - L2 LINE L2 -451 2863 2626 604 290 50 23 chr17 5874186 5874407 -79564073 + MIR SINE MIR 13 239 -23 567 264 63 6 chr17 5874466 5874625 -79563855 - MIR SINE MIR -71 191 24 22 42 0 0 chr17 5875310 5875334 -79563146 + GC_rich Low_complexity Low_complexity 1 24 0 2208 107 20 3 chr17 5875804 5876102 -79562378 + AluSx SINE Alu 1 303 -9 692 221 28 17 chr17 5876198 5876379 -79562101 + MER5A DNA MER1_type 2 184 -5 321 197 13 26 chr17 5876495 5876571 -79561909 - MIR SINE MIR -102 160 86 974 208 36 5 chr17 5876574 5876795 -79561685 - LTR16C LTR ERVL -2 489 262 210 353 69 28 chr17 5877097 5877315 -79561165 - L2 LINE L2 -429 2885 2659 281 167 45 30 chr17 5877860 5877926 -79560554 - AluS SINE Alu -237 71 5 897 73 0 9 chr17 5877927 5878036 -79560444 + AluSx SINE Alu 46 153 -159 2277 109 3 0 chr17 5878161 5878465 -79560015 - AluSq SINE Alu -5 308 4 1493 109 37 251 chr17 5878470 5878857 -79559623 + Tigger3(Golem) DNA MER2_type 2497 2679 -350 2376 70 0 10 chr17 5878857 5879157 -79559323 - AluY SINE Alu -14 297 1 1493 109 37 251 chr17 5879157 5879446 -79559034 + Tigger3(Golem) DNA MER2_type 2679 3028 -1 435 309 94 43 chr17 5879508 5879829 -79558651 - L1MDa LINE L1 -3936 2604 2355 1092 215 0 0 chr17 5880087 5880282 -79558198 - MLT1A1 LTR MaLR -2 363 169 333 250 0 0 chr17 5880272 5880340 -79558140 - MLT1A1 LTR MaLR -129 236 169 * 333 250 0 0 chr17 5880330 5880398 -79558082 - MLT1A1 LTR MaLR -129 236 169 * 1314 153 49 5 chr17 5880388 5880611 -79557869 - MLT1A1 LTR MaLR -129 236 4 206 290 138 21 chr17 5880805 5880950 -79557530 - L3 LINE CR1 -108 1469 1308 387 295 12 66 chr17 5881771 5881937 -79556543 + MIR3 SINE MIR 33 189 -19 2634 65 0 0 chr17 5882164 5882471 -79556009 - AluY SINE Alu -4 307 1 237 109 0 43 chr17 5882512 5882558 -79555922 - MIR SINE MIR -102 160 117 315 322 48 7 chr17 5882625 5882771 -79555709 - MIR SINE MIR -99 163 12 435 197 0 0 chr17 5883033 5883109 -79555371 - MER63 DNA MER1_type -84 752 677 593 273 163 22 chr17 5883621 5883984 -79554496 + L2 LINE L2 2899 3312 -1 301 310 56 56 chr17 5884080 5884293 -79554187 + MIR SINE MIR 27 239 -23 683 205 0 18 chr17 5884609 5884775 -79553705 - L1MB5 LINE L1 0 6174 6012 984 181 78 21 chr17 5884790 5885033 -79553447 - L1MD3 LINE L1 -9 7986 7730 499 328 104 27 chr17 5885342 5885717 -79552763 - MLT1I LTR MaLR -1 408 5 2202 107 7 3 chr17 5886089 5886388 -79552092 - AluSc SINE Alu -9 300 1 789 263 109 63 chr17 5886437 5886851 -79551629 + MLT1D LTR MaLR 1 433 -72 254 301 21 11 chr17 5887313 5887406 -79551074 + MIR SINE MIR 30 123 -85 21 0 0 0 chr17 5887643 5887664 -79550816 + AT_rich Low_complexity Low_complexity 1 21 0 2206 119 0 0 chr17 5887747 5888040 -79550440 - AluSx SINE Alu -19 293 1 254 301 42 42 chr17 5888049 5888192 -79550288 + L2 LINE L2 3169 3311 -2 1641 260 47 57 chr17 5888912 5889511 -79548969 - MLT1E LTR MaLR 0 593 1 198 71 0 0 chr17 5890432 5890460 -79548020 + (TC)n Simple_repeat Simple_repeat 1 28 0 1177 130 5 31 chr17 5891581 5891755 -79546725 - AluJb SINE Alu -4 308 138 2140 133 0 3 chr17 5891755 5892049 -79546431 - AluSx SINE Alu -19 293 1 1177 130 5 31 chr17 5892049 5892066 -79546414 - AluJb SINE Alu -174 138 122 321 232 12 49 chr17 5892171 5892253 -79546227 - L1MC4 LINE L1 -1355 6687 6609 441 282 44 92 chr17 5892612 5892735 -79545745 - L1ME LINE L1 -342 5779 5652 2311 97 13 7 chr17 5892735 5893043 -79545437 - AluSg SINE Alu 0 310 1 441 282 44 92 chr17 5893043 5893280 -79545200 - L1ME LINE L1 -469 5652 5434 545 284 38 48 chr17 5894037 5894136 -79544344 - MIR SINE MIR -3 259 160 2185 113 0 13 chr17 5894136 5894437 -79544043 - AluSq SINE Alu -16 297 1 545 284 38 48 chr17 5894437 5894595 -79543885 - MIR SINE MIR -102 160 5 554 319 28 66 chr17 5895092 5895412 -79543068 + L2 LINE L2 2932 3239 -33 1242 109 0 40 chr17 5895421 5895596 -79542884 + AluSx SINE Alu 1 168 -144 493 298 4 8 chr17 5895696 5895931 -79542549 - AluSq SINE Alu -77 236 3 1778 142 0 77 chr17 5896001 5896324 -79542156 - AluSx SINE Alu -12 300 3 356 377 63 6 chr17 5896616 5896791 -79541689 - HAL1 LINE L1 -710 1797 1613 1937 142 48 0 chr17 5897270 5897565 -79540915 + AluSc SINE Alu 1 309 0 211 289 96 0 chr17 5897938 5898021 -79540459 - L2 LINE L2 0 3272 3182 412 266 49 21 chr17 5898031 5898174 -79540306 + MIR3 SINE MIR 4 150 -58 395 237 105 48 chr17 5898226 5898452 -79540028 - MIR SINE MIR -2 260 19 2179 136 0 0 chr17 5898479 5898788 -79539692 - AluSx SINE Alu 0 312 4 323 349 71 0 chr17 5899190 5899316 -79539164 - MIR3 SINE MIR -25 183 49 938 217 4 71 chr17 5899429 5899669 -79538811 - MER58A DNA MER1_type 0 224 1 376 341 82 22 chr17 5899723 5899905 -79538575 + L2 LINE L2 3079 3271 -1 513 182 0 0 chr17 5900252 5900351 -79538129 + (TG)n Simple_repeat Simple_repeat 2 100 0 798 166 0 45 chr17 5900363 5900520 -79537960 + MLT1B LTR MaLR 34 183 -207 747 176 36 24 chr17 5900501 5900666 -79537814 + MLT1B LTR MaLR 298 464 -3 * 2262 88 7 7 chr17 5901468 5901763 -79536717 + AluSg SINE Alu 5 299 -11 733 252 18 91 chr17 5902021 5902295 -79536185 + MIR SINE MIR 9 262 0 303 258 0 0 chr17 5902765 5902831 -79535649 - MIR SINE MIR -65 143 78 364 324 27 60 chr17 5903416 5903601 -79534879 + MIR3 SINE MIR 3 181 -27 268 356 11 0 chr17 5903952 5904039 -79534441 - L2 LINE L2 -64 3208 3121 312 294 117 22 chr17 5904879 5905059 -79533421 - LTR16A1 LTR ERVL -93 364 168 366 80 0 0 chr17 5906159 5906209 -79532271 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 351 271 202 26 chr17 5906240 5906763 -79531717 - L2 LINE L2 -95 3218 2602 387 325 0 4 chr17 5907443 5907679 -79530801 + (CA)n Simple_repeat Simple_repeat 1 234 0 195 42 0 0 chr17 5908232 5908256 -79530224 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 389 317 26 118 chr17 5909156 5909462 -79529018 - L2 LINE L2 -19 3253 2976 330 270 117 55 chr17 5909625 5909953 -79528527 + L1MC5 LINE L1 1958 8032 -209 24 53 0 0 chr17 5909966 5910004 -79528476 + AT_rich Low_complexity Low_complexity 1 38 0 310 293 40 67 chr17 5910445 5910698 -79527782 - L2 LINE L2 -1230 2084 1839 274 215 124 41 chr17 5911436 5911557 -79526923 + MLT1H LTR MaLR 408 538 -11 481 282 28 21 chr17 5912644 5912786 -79525694 + MIR SINE MIR 61 203 -59 235 118 0 0 chr17 5912789 5912823 -79525657 + MLT1L LTR MaLR 4 37 -578 474 279 61 92 chr17 5912866 5912936 -79525544 + MLT1J LTR MaLR 111 182 -329 1824 93 61 83 chr17 5912936 5913248 -79525232 + AluSq SINE Alu 1 305 -8 474 279 61 92 chr17 5913248 5913589 -79524891 + MLT1J LTR MaLR 182 509 -2 2184 119 3 7 chr17 5913707 5914017 -79524463 - AluSg SINE Alu -1 309 1 206 281 0 18 chr17 5914042 5914099 -79524381 - L2 LINE L2 -224 3048 2993 948 239 93 89 chr17 5914983 5915081 -79523399 - MLT1H1 LTR MaLR -10 545 449 2359 113 0 3 chr17 5915081 5915391 -79523089 + AluSq SINE Alu 1 309 -4 948 239 93 89 chr17 5915391 5915867 -79522613 - MLT1H1 LTR MaLR -106 449 1 224 319 43 21 chr17 5917229 5917323 -79521157 + MIR SINE MIR 157 252 -10 610 139 14 36 chr17 5919571 5919857 -79518623 + GA-rich Low_complexity Low_complexity 1 279 0 1080 210 47 0 chr17 5921114 5921328 -79517152 - MIR SINE MIR -12 250 27 205 216 39 0 chr17 5922237 5922288 -79516192 + GA-rich Low_complexity Low_complexity 4 56 0 731 303 138 24 chr17 5922527 5922867 -79515613 - L1MC4a LINE L1 -1908 5900 5522 1990 131 0 67 chr17 5922992 5923320 -79515160 - AluJo SINE Alu -6 306 1 256 189 98 82 chr17 5924164 5924286 -79514194 + LTR9 LTR ERV1 1 124 -488 1958 107 0 36 chr17 5924287 5924595 -79513885 + AluSc SINE Alu 1 297 -12 2242 177 46 13 chr17 5924598 5925056 -79513424 + LTR9B LTR ERV1 170 642 -2 1049 183 48 5 chr17 5925675 5925883 -79512597 - MER20 DNA MER1_type 0 219 3 516 187 90 8 chr17 5926274 5926408 -79512072 + L1ME4a LINE L1 5734 5878 -243 478 247 13 83 chr17 5927849 5928098 -79510382 - L1MC/D LINE L1 -385 5736 5565 386 350 19 31 chr17 5928123 5928283 -79510197 + MIR SINE MIR 28 185 -77 2351 134 39 17 chr17 5929028 5929438 -79509042 - MSTB LTR MaLR 0 426 8 242 272 177 44 chr17 5929439 5929597 -79508883 - MIR3 SINE MIR -27 181 3 684 241 70 10 chr17 5931105 5931304 -79507176 - L2 LINE L2 -222 3091 2881 1914 166 33 14 chr17 5931317 5931594 -79506886 - MLT1B LTR MaLR -16 374 87 2117 117 0 0 chr17 5931594 5931876 -79506604 + AluSx SINE Alu 23 304 -8 1914 166 33 14 chr17 5931876 5931965 -79506515 - MLT1B LTR MaLR -303 87 1 413 257 182 14 chr17 5932951 5933099 -79505381 - MIR SINE MIR -34 228 56 231 286 0 0 chr17 5934984 5935040 -79503440 + MIR SINE MIR 92 147 -61 236 179 0 0 chr17 5935385 5935424 -79503056 - MER5A DNA MER1_type 0 189 151 2333 192 11 45 chr17 5935478 5935771 -79502709 + L1MA5 LINE L1 1356 1621 -5168 2480 95 3 0 chr17 5935771 5936076 -79502404 + AluSq SINE Alu 1 306 -7 2333 192 11 45 chr17 5936076 5936356 -79502124 + L1MA5 LINE L1 1621 1909 -4880 230 217 0 0 chr17 5936356 5936402 -79502078 - L1M2c LINE L1 -4844 1945 1900 * 995 168 20 0 chr17 5936400 5936603 -79501877 + L1MA5 LINE L1 3600 3806 -2982 * 7454 130 22 36 chr17 5936583 5939017 -79499463 + L1MA5 LINE L1 4552 6940 -2 25 23 0 23 chr17 5939017 5939035 -79499445 + AT_rich Low_complexity Low_complexity 1 18 -24 2637 80 0 8 chr17 5939035 5939398 -79499082 - L1PA8 LINE L1 0 6172 5813 25 23 0 23 chr17 5939398 5939422 -79499058 + AT_rich Low_complexity Low_complexity 18 42 0 550 205 17 8 chr17 5939437 5939554 -79498926 - MER5A DNA MER1_type -63 126 9 2090 131 3 31 chr17 5939941 5940262 -79498218 - AluSx SINE Alu 0 312 1 213 39 0 0 chr17 5940769 5940795 -79497685 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 298 177 56 chr17 5941308 5941523 -79496957 + L2 LINE L2 3029 3269 -3 267 247 26 26 chr17 5941880 5941957 -79496523 + MIR SINE MIR 56 132 -130 1547 204 34 55 chr17 5943206 5943588 -79494892 - MLT1A2 LTR MaLR 0 374 1 202 360 45 0 chr17 5943743 5943854 -79494626 - L2 LINE L2 -2 3270 3155 290 319 18 26 chr17 5944083 5944196 -79494284 + MIR SINE MIR 37 148 -114 227 245 138 21 chr17 5948325 5948419 -79490061 + MIR SINE MIR 49 153 -55 742 329 40 40 chr17 5948514 5948943 -79489537 + MLT1K LTR MaLR 138 566 -22 190 286 71 14 chr17 5949217 5949287 -79489193 - MIR SINE MIR -70 192 119 842 145 0 0 chr17 5949530 5949749 -79488731 - FLAM_C SINE Alu 0 219 1 403 310 103 17 chr17 5949755 5949797 -79488683 - MIR SINE MIR -56 206 169 1134 242 102 50 chr17 5949797 5950277 -79488203 + MLT1D LTR MaLR 1 505 0 403 310 103 17 chr17 5950277 5950408 -79488072 - MIR SINE MIR -93 169 18 686 296 4 48 chr17 5950440 5950670 -79487810 + MIR SINE MIR 33 252 -10 817 216 64 5 chr17 5950752 5950956 -79487524 - MER20 DNA MER1_type 0 219 4 329 340 31 13 chr17 5951187 5951211 -79487269 + MIR SINE MIR 100 122 -140 6489 60 33 1 chr17 5951211 5952137 -79486343 + L1PA8 LINE L1 5218 6171 -1 329 340 31 13 chr17 5952137 5952271 -79486209 + MIR SINE MIR 122 261 -1 299 250 9 56 chr17 5952745 5952853 -79485627 + MIR SINE MIR 20 122 -86 4531 58 15 5 chr17 5953227 5953835 -79484645 - L1PA7 LINE L1 -1 6153 5540 345 319 26 0 chr17 5953883 5953990 -79484490 - MIR SINE MIR -77 185 76 248 227 0 113 chr17 5953990 5954087 -79484393 + MER91B DNA MER1_type 1 86 -104 1655 205 43 57 chr17 5954569 5955076 -79483404 - MLT1D LTR MaLR -3 502 3 1968 130 3 7 chr17 5955791 5956075 -79482405 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr17 5956078 5956105 -79482375 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 241 294 17 84 chr17 5957420 5957539 -79480941 + MIR SINE MIR 46 156 -106 23 0 0 0 chr17 5958299 5958322 -79480158 + AT_rich Low_complexity Low_complexity 1 23 0 338 231 0 13 chr17 5958337 5958415 -79480065 + MIR3 SINE MIR 115 191 -17 2082 126 3 10 chr17 5958581 5958882 -79479598 + AluSx SINE Alu 1 299 -13 334 210 6 160 chr17 5960197 5960378 -79478102 + HAL1b LINE L1 1185 1337 -11 488 293 11 42 chr17 5961361 5961552 -79476928 - MIR SINE MIR -6 256 72 303 272 0 43 chr17 5961792 5961884 -79476596 - MLT1H LTR MaLR -415 134 47 187 299 72 31 chr17 5962588 5962685 -79475795 + MIR3 SINE MIR 105 205 -3 300 264 230 40 chr17 5963038 5963103 -79475377 + MER5A DNA MER1_type 13 64 -125 2103 121 10 20 chr17 5963103 5963408 -79475072 + AluSx SINE Alu 1 302 -10 300 264 230 40 chr17 5963408 5963490 -79474990 + MER5A DNA MER1_type 64 188 -1 318 268 91 81 chr17 5963493 5963691 -79474789 + LTR16C LTR ERVL 2 201 -290 2195 201 82 46 chr17 5963691 5964254 -79474226 - MER119 DNA MER1_type 0 583 1 497 258 129 17 chr17 5964279 5964519 -79473961 + LTR16C LTR ERVL 222 488 -3 189 291 103 0 chr17 5964547 5964664 -79473816 - L2 LINE L2 -673 2641 2513 239 324 67 9 chr17 5965276 5965381 -79473099 - MIR SINE MIR -70 192 82 * 261 293 204 16 chr17 5965365 5965488 -79472992 - L2 LINE L2 -4 3309 3210 1571 111 134 0 chr17 5965488 5965750 -79472730 + AluY SINE Alu 1 297 -4 261 293 204 16 chr17 5965750 5965817 -79472663 - L2 LINE L2 -103 3210 3083 1848 244 42 33 chr17 5967225 5967747 -79470733 - MER74B LTR ERVL -58 564 35 2583 84 5 22 chr17 5967747 5968117 -79470363 - THE1B LTR MaLR 0 364 1 1848 244 42 33 chr17 5968117 5968144 -79470336 - MER74B LTR ERVL -587 35 10 511 308 27 0 chr17 5968148 5968333 -79470147 + L2 LINE L2 2867 3056 -257 369 298 169 35 chr17 5968583 5969120 -79469360 + L2 LINE L2 2172 2780 -534 215 61 30 0 chr17 5970012 5970045 -79468435 + (TC)n Simple_repeat Simple_repeat 2 35 0 359 303 35 14 chr17 5970597 5970739 -79467741 - L3 LINE CR1 -86 1491 1347 556 296 38 32 chr17 5970884 5971070 -79467410 - MIR SINE MIR -3 259 73 196 354 53 18 chr17 5971242 5971355 -79467125 + L2 LINE L2 3122 3238 -34 301 317 57 16 chr17 5971519 5971642 -79466838 + MIR3 SINE MIR 6 133 -75 358 233 25 42 chr17 5972102 5972222 -79466258 + L2 LINE L2 1371 1488 -1826 186 282 39 39 chr17 5972576 5972654 -79465826 - MIR SINE MIR -103 105 28 723 263 59 0 chr17 5972943 5973129 -79465351 + MLT1F LTR MaLR 9 205 -337 602 113 0 120 chr17 5973129 5973262 -79465218 - SVA Other Other -406 980 864 280 274 0 36 chr17 5973270 5973354 -79465126 + MLT1F LTR MaLR 216 296 -246 1234 209 25 53 chr17 5973354 5973425 -79465055 - MLT1A1 LTR MaLR 0 365 294 1453 180 3 25 chr17 5973425 5973741 -79464739 + AluSq SINE Alu 2 310 -3 1234 209 25 53 chr17 5973741 5973990 -79464490 - MLT1A1 LTR MaLR -71 294 54 841 166 140 47 chr17 5974204 5974439 -79464041 + MLT1F LTR MaLR 286 542 0 193 253 0 27 chr17 5975512 5975587 -79462893 + L2 LINE L2 3015 3087 -185 229 216 57 45 chr17 5976118 5976206 -79462274 + L3 LINE CR1 575 663 -914 546 303 88 43 chr17 5977437 5977481 -79460999 - L1ME4a LINE L1 -233 5888 5847 2257 102 3 10 chr17 5977481 5977784 -79460696 + AluY SINE Alu 1 301 -10 546 303 88 43 chr17 5977784 5978205 -79460275 - L1ME4a LINE L1 -274 5847 5402 1133 187 20 24 chr17 5978289 5978535 -79459945 - L1PB4 LINE L1 -2 6154 5910 419 182 11 0 chr17 5978535 5978623 -79459857 + L1PB4 LINE L1 5762 5850 -306 2333 113 0 0 chr17 5978644 5978953 -79459527 - AluSg SINE Alu -1 309 1 3498 152 7 8 chr17 5979013 5979627 -79458853 - L1PA16 LINE L1 0 6166 5554 512 209 0 22 chr17 5979629 5979763 -79458717 + L1 LINE L1 3209 3339 -2807 5788 174 17 42 chr17 5979869 5981344 -79457136 + L1P4 LINE L1 3994 5429 -737 1609 141 0 72 chr17 5981344 5981667 -79456813 + AluSx SINE Alu 31 312 0 5788 174 17 42 chr17 5981667 5981729 -79456751 + L1P4 LINE L1 5429 5491 -675 341 267 14 62 chr17 5982279 5982425 -79456055 - LTR33 LTR ERVL -28 493 355 1474 216 92 77 chr17 5982425 5982903 -79455577 + MLT1E LTR MaLR 1 485 -108 210 108 0 54 chr17 5982917 5982932 -79455548 + (GAAAA)n Simple_repeat Simple_repeat 2 16 -20 2013 113 0 31 chr17 5982932 5983252 -79455228 + AluSg SINE Alu 1 310 0 210 108 0 54 chr17 5983252 5983273 -79455207 + (GAAAA)n Simple_repeat Simple_repeat 16 36 0 1342 185 122 24 chr17 5983771 5984100 -79454380 + MLT1A1 LTR MaLR 5 365 0 200 318 15 0 chr17 5984227 5984293 -79454187 - MIR3 SINE MIR -38 170 104 198 71 0 0 chr17 5984645 5984673 -79453807 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 349 274 82 30 chr17 5985282 5985417 -79453063 + MIR3 SINE MIR 67 208 0 2056 156 0 13 chr17 5985431 5985739 -79452741 + AluJb SINE Alu 1 304 -8 2386 79 0 0 chr17 5985816 5986120 -79452360 - AluY SINE Alu -7 304 1 26 64 0 0 chr17 5986300 5986347 -79452133 + AT_rich Low_complexity Low_complexity 1 47 0 418 294 121 22 chr17 5986727 5986958 -79451522 + MIR SINE MIR 5 258 -4 402 57 0 0 chr17 5986995 5987048 -79451432 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 208 344 32 43 chr17 5987052 5987145 -79451335 - L2 LINE L2 -16 3297 3206 320 247 26 0 chr17 5987505 5987582 -79450898 + MIR SINE MIR 163 241 -21 2399 98 0 0 chr17 5988027 5988322 -79450158 + AluSg SINE Alu 1 295 -15 809 171 0 0 chr17 5989470 5989587 -79448893 + FLAM_C SINE Alu 1 117 -26 712 57 29 0 chr17 5989587 5989692 -79448788 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 873 272 62 49 chr17 5989942 5990310 -79448170 + MLT1H LTR MaLR 29 401 -148 486 228 0 0 chr17 5991005 5991163 -79447317 + (ATG)n Simple_repeat Simple_repeat 1 158 0 252 100 0 0 chr17 5991171 5991211 -79447269 + (ATGGTG)n Simple_repeat Simple_repeat 1 40 0 345 367 82 46 chr17 5991307 5991699 -79446781 + L2 LINE L2 2866 3271 -1 222 37 0 0 chr17 5992306 5992333 -79446147 + (CA)n Simple_repeat Simple_repeat 2 28 0 488 303 51 28 chr17 5992742 5992920 -79445560 - MIR SINE MIR -12 250 69 702 275 57 50 chr17 5993420 5993989 -79444491 - L1M4 LINE L1 -2837 3309 2733 326 283 20 30 chr17 5994107 5994206 -79444274 - L1M4 LINE L1 -3600 2546 2449 3428 133 8 10 chr17 5994277 5994789 -79443691 + Tigger3b DNA MER2_type 1 511 -720 225 250 0 36 chr17 5995063 5995147 -79443333 + (TA)n Simple_repeat Simple_repeat 2 82 0 1679 106 0 8 chr17 5995186 5995422 -79443058 + AluSg SINE Alu 61 294 -16 2170 110 7 0 chr17 5995614 5995924 -79442556 - AluSx SINE Alu 0 312 1 1901 143 0 3 chr17 5997266 5997566 -79440914 + AluSc SINE Alu 1 299 -10 292 281 238 5 chr17 5998113 5998298 -79440182 - L3 LINE CR1 -89 1488 1261 2167 97 20 0 chr17 5998665 5998964 -79439516 + AluSg SINE Alu 1 305 -5 25 0 0 0 chr17 5999214 5999239 -79439241 + AT_rich Low_complexity Low_complexity 1 25 0 389 323 41 66 chr17 6000032 6000370 -79438110 + L1MEc LINE L1 2140 2428 -3787 563 316 36 0 chr17 6000430 6000598 -79437882 - MIR SINE MIR 0 262 89 770 186 11 57 chr17 6001753 6001930 -79436550 + MER5B DNA MER1_type 1 169 -9 183 220 51 51 chr17 6002379 6002438 -79436042 + L2 LINE L2 3160 3218 -54 651 310 56 19 chr17 6002841 6003109 -79435371 + L1ME1 LINE L1 5885 6162 -4 536 285 18 18 chr17 6003278 6003443 -79435037 + MER90 LTR ERV1 445 609 -5 209 269 0 0 chr17 6004265 6004317 -79434163 + (CA)n Simple_repeat Simple_repeat 2 53 0 334 236 73 41 chr17 6004572 6004695 -79433785 + L2 LINE L2 2964 3090 -182 1059 260 69 53 chr17 6004746 6005181 -79433299 - MLT1J LTR MaLR 0 511 70 1933 118 17 10 chr17 6005192 6005488 -79432992 + AluSq SINE Alu 1 298 -15 399 194 0 58 chr17 6005881 6005984 -79432496 + LTR67 LTR ERVL 458 554 -3 701 151 8 0 chr17 6006044 6006163 -79432317 - L1MA4 LINE L1 -6 6294 6175 1772 134 0 7 chr17 6006521 6006840 -79431640 + AluSc SINE Alu 1 317 0 2578 211 25 13 chr17 6007676 6007705 -79430775 + MER68 LTR ERV1 1 28 -534 1677 135 4 4 chr17 6007705 6008007 -79430473 - AluSq SINE Alu 0 319 18 2578 211 25 13 chr17 6008007 6008531 -79429949 + MER68 LTR ERV1 28 562 0 640 167 0 0 chr17 6009068 6009170 -79429310 + U6 snRNA snRNA 1 102 -5 2335 62 0 0 chr17 6009170 6009462 -79429018 - AluY SINE Alu -19 292 1 464 150 40 30 chr17 6009480 6009580 -79428900 + L1MA6 LINE L1 6200 6300 0 375 252 84 15 chr17 6009678 6009809 -79428671 - MIR SINE MIR -115 147 8 2003 127 17 0 chr17 6010370 6010670 -79427810 + AluSg SINE Alu 1 305 -5 375 23 0 0 chr17 6010687 6010731 -79427749 + (GGA)n Simple_repeat Simple_repeat 1 44 0 360 321 63 70 chr17 6011041 6011328 -79427152 - L1 LINE L1 -853 5293 5009 900 315 195 25 chr17 6011366 6012059 -79426421 + L2 LINE L2 2149 2959 -355 439 82 0 0 chr17 6012084 6012145 -79426335 - AluSp/q SINE Alu -13 300 240 916 106 15 0 chr17 6012344 6012476 -79426004 + AluY SINE Alu 1 134 -177 2137 92 7 3 chr17 6012476 6012770 -79425710 + AluSc SINE Alu 1 295 -14 2277 101 0 0 chr17 6013124 6013431 -79425049 + AluSq SINE Alu 1 307 -6 4527 274 90 26 chr17 6013438 6015613 -79422867 + L1 LINE L1 2663 4977 -1169 1068 181 24 52 chr17 6015615 6015825 -79422655 + MLT1A2 LTR MaLR 11 214 -160 665 220 0 8 chr17 6015841 6015973 -79422507 + L1MD2 LINE L1 722 852 -5557 * 929 69 0 0 chr17 6015967 6016083 -79422397 - L1PA5 LINE L1 -167 5987 5872 1281 55 0 0 chr17 6016083 6016242 -79422238 + L1PA5 LINE L1 5992 6154 0 261 0 0 0 chr17 6016248 6016277 -79422203 + (TA)n Simple_repeat Simple_repeat 2 30 0 1511 202 15 3 chr17 6016277 6016599 -79421881 + L1MD2 LINE L1 841 1166 -5243 1259 190 106 44 chr17 6016643 6016829 -79421651 + L1MD2 LINE L1 3099 3272 -3134 2266 89 7 0 chr17 6016829 6017133 -79421347 + AluSc SINE Alu 1 306 -3 1259 190 106 44 chr17 6017133 6017382 -79421098 + L1MD2 LINE L1 3272 3561 -2845 711 147 66 22 chr17 6017384 6017520 -79420960 + FLAM_C SINE Alu 2 143 0 2104 239 37 31 chr17 6017520 6017681 -79420799 + L1MD2 LINE L1 3953 4112 -2294 1646 165 44 7 chr17 6017681 6017978 -79420502 + AluJb SINE Alu 1 308 -4 2104 239 37 31 chr17 6017978 6018468 -79420012 + L1MD2 LINE L1 4112 4608 -1798 903 54 0 0 chr17 6018468 6018580 -79419900 + AluSg/x SINE Alu 189 300 -12 7379 49 10 12 chr17 6018617 6020080 -79418400 + SVA Other Other 3 1383 -3 25 0 0 0 chr17 6020116 6020141 -79418339 + AT_rich Low_complexity Low_complexity 1 25 0 491 239 99 52 chr17 6020335 6020678 -79417802 + L1MC5 LINE L1 7389 7747 -214 2987 215 35 48 chr17 6020692 6021053 -79417427 + L1MD2 LINE L1 4602 4966 -1653 1835 98 77 21 chr17 6021053 6021339 -79417141 + AluY SINE Alu 1 302 -9 2987 215 35 48 chr17 6021339 6021620 -79416860 + L1MD2 LINE L1 4966 5249 -1370 2351 75 3 0 chr17 6021620 6021925 -79416555 - AluSp SINE Alu -7 306 1 2987 215 35 48 chr17 6021925 6022781 -79415699 + L1MD2 LINE L1 5249 6086 -533 1119 143 0 0 chr17 6022782 6022950 -79415530 + AluSg/x SINE Alu 134 301 -11 733 112 96 24 chr17 6022960 6023085 -79415395 + FLAM_C SINE Alu 8 141 -2 2090 120 0 0 chr17 6023085 6023377 -79415103 + AluSx SINE Alu 1 292 -20 1791 234 22 18 chr17 6023397 6023855 -79414625 + L1MD2 LINE L1 6071 6530 -89 418 138 25 0 chr17 6023908 6023988 -79414492 + L1MD2 LINE L1 6537 6618 -1 1961 142 0 13 chr17 6023998 6024300 -79414180 + AluSq SINE Alu 1 298 -15 234 258 16 0 chr17 6024344 6024406 -79414074 + (TGAA)n Simple_repeat Simple_repeat 3 65 0 1145 139 0 0 chr17 6024428 6024594 -79413886 + AluJo SINE Alu 1 166 -146 202 271 0 0 chr17 6025086 6025134 -79413346 + MIR SINE MIR 194 241 -21 341 245 0 60 chr17 6026379 6026683 -79411797 + (CA)n Simple_repeat Simple_repeat 1 285 0 288 0 0 0 chr17 6026699 6026731 -79411749 + (CA)n Simple_repeat Simple_repeat 2 33 0 1719 173 10 0 chr17 6027422 6027728 -79410752 - AluJb SINE Alu -3 309 1 1769 104 4 0 chr17 6028085 6028326 -79410154 + AluSx SINE Alu 27 268 -44 374 339 93 32 chr17 6028468 6028608 -79409872 - L1MC/D LINE L1 -747 5399 5269 1425 25 0 0 chr17 6028608 6028771 -79409709 + L1PA5 LINE L1 5987 6149 -5 374 339 93 32 chr17 6028771 6029178 -79409302 - L1MC/D LINE L1 -877 5269 4890 2404 51 0 3 chr17 6029437 6029733 -79408747 + AluY SINE Alu 1 295 -16 337 307 195 15 chr17 6029746 6030013 -79408467 - L1MC/D LINE L1 -1722 4424 4110 1915 133 6 38 chr17 6030067 6030382 -79408098 - AluSq SINE Alu -8 305 1 228 244 0 0 chr17 6030666 6030707 -79407773 - MIR SINE MIR -132 76 36 906 9 0 0 chr17 6030956 6031064 -79407416 + AluY SINE Alu 203 310 -1 443 283 45 71 chr17 6031571 6031734 -79406746 - MIR SINE MIR -69 193 34 2191 98 0 0 chr17 6031734 6032029 -79406451 - AluSx SINE Alu -17 295 1 443 283 45 71 chr17 6032029 6032063 -79406417 - MIR SINE MIR -228 34 1 2251 70 10 3 chr17 6032661 6032962 -79405518 - AluSq SINE Alu -10 303 1 378 297 27 27 chr17 6032973 6033158 -79405322 + L2 LINE L2 1705 1889 -1425 917 245 71 40 chr17 6033160 6033511 -79404969 + MER92A LTR ERV1 1 362 -50 511 297 221 26 chr17 6033526 6034636 -79403844 + L2 LINE L2 1888 3218 -95 381 93 0 0 chr17 6034666 6034720 -79403760 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 327 294 117 22 chr17 6035817 6035997 -79402483 + LTR16A1 LTR ERVL 168 364 -93 266 356 11 0 chr17 6036830 6036917 -79401563 + L2 LINE L2 3121 3208 -64 393 304 31 58 chr17 6037259 6037450 -79401030 - MIR3 SINE MIR -20 188 3 296 258 0 0 chr17 6038034 6038100 -79400380 + MIR SINE MIR 78 143 -65 736 248 18 91 chr17 6038558 6038832 -79399648 - MIR SINE MIR 0 262 9 2198 88 7 0 chr17 6039089 6039383 -79399097 - AluSg SINE Alu -10 300 5 813 199 30 6 chr17 6040178 6040344 -79398136 - MLT1B LTR MaLR 0 467 298 * 849 153 12 43 chr17 6040319 6040482 -79397998 - MLT1B LTR MaLR -199 191 34 513 182 0 0 chr17 6040494 6040593 -79397887 + (CA)n Simple_repeat Simple_repeat 2 100 0 387 343 69 23 chr17 6040939 6041114 -79397366 - L2 LINE L2 -1 3271 3089 914 217 4 71 chr17 6041177 6041417 -79397063 + MER58A DNA MER1_type 1 224 0 319 349 71 0 chr17 6041530 6041656 -79396824 + MIR3 SINE MIR 49 183 -25 2031 136 0 0 chr17 6042055 6042364 -79396116 + AluSx SINE Alu 4 312 0 389 235 105 45 chr17 6042391 6042616 -79395864 + MIR SINE MIR 19 260 -2 407 266 49 21 chr17 6042668 6042811 -79395669 - MIR3 SINE MIR -58 150 4 209 289 96 0 chr17 6042821 6042904 -79395576 + L2 LINE L2 3182 3272 0 231 103 0 0 chr17 6043274 6043313 -79395167 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1779 122 0 0 chr17 6043314 6043568 -79394912 - AluSc SINE Alu -55 254 1 364 391 39 6 chr17 6044047 6044226 -79394254 + HAL1 LINE L1 1613 1797 -710 1987 118 0 77 chr17 6044510 6044833 -79393647 + AluSx SINE Alu 3 300 -12 402 296 68 46 chr17 6044851 6044901 -79393579 + L1ME LINE L1 5267 5314 -807 2346 98 0 3 chr17 6044901 6045198 -79393282 + AluSx SINE Alu 1 296 -16 2478 65 7 3 chr17 6045200 6045507 -79392973 + AluY SINE Alu 1 308 -3 402 296 68 46 chr17 6045507 6045786 -79392694 + L1ME LINE L1 5314 5603 -518 3907 128 32 8 chr17 6046076 6046691 -79391789 + L1PA16 LINE L1 5533 6162 -4 760 274 91 11 chr17 6046850 6047223 -79391257 + LTR33A LTR ERVL 121 523 0 349 292 289 0 chr17 6047223 6047535 -79390945 - L2 LINE L2 -517 2797 2396 252 0 0 0 chr17 6047540 6047568 -79390912 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 1771 118 4 4 chr17 6047614 6047859 -79390621 - AluSq SINE Alu -11 302 58 309 318 20 47 chr17 6048717 6048865 -79389615 + MIR SINE MIR 63 206 -56 2328 96 23 0 chr17 6049587 6049890 -79388590 + AluSg SINE Alu 1 310 0 221 283 283 26 chr17 6050002 6050193 -79388287 - MIR SINE MIR -1 261 22 306 0 0 0 chr17 6050931 6050965 -79387515 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 143 0 0 chr17 6050966 6051001 -79387479 + (GA)n Simple_repeat Simple_repeat 2 36 0 308 253 76 0 chr17 6051040 6051119 -79387361 + L2 LINE L2 3152 3236 -36 407 257 53 9 chr17 6051197 6051310 -79387170 + L2 LINE L2 3188 3305 -8 277 320 155 39 chr17 6051365 6051705 -79386775 + L3 LINE CR1 1116 1508 -69 1050 154 64 86 chr17 6051705 6051850 -79386630 + MER30 DNA MER1_type 2 142 -88 2267 90 0 23 chr17 6051850 6052150 -79386330 + AluSg SINE Alu 1 293 -17 1050 154 64 86 chr17 6052150 6052237 -79386243 + MER30 DNA MER1_type 142 229 -1 277 320 155 39 chr17 6052237 6052284 -79386196 + L3 LINE CR1 1508 1548 -29 2338 96 0 0 chr17 6052731 6053023 -79385457 + AluSg SINE Alu 1 292 -18 593 279 11 34 chr17 6053221 6053400 -79385080 + MIR SINE MIR 29 203 -59 1173 282 95 36 chr17 6053974 6054502 -79383978 + L2 LINE L2 2222 2780 -534 1846 42 0 30 chr17 6054865 6055102 -79383378 + L1PA5 LINE L1 5925 6154 0 208 299 72 0 chr17 6055110 6055207 -79383273 + L2 LINE L2 2766 2869 -445 578 175 0 10 chr17 6055888 6055991 -79382489 + MLT1C LTR MaLR 1 102 -365 2239 88 0 7 chr17 6055992 6056275 -79382205 - AluSc SINE Alu -8 301 21 254 200 0 0 chr17 6056277 6056332 -79382148 - L1MC4 LINE L1 -540 7502 7448 1844 165 8 58 chr17 6056348 6056741 -79381739 + MLT1C LTR MaLR 95 467 0 2469 245 120 20 chr17 6056741 6057912 -79380568 + L1MC4 LINE L1 6482 7713 -95 331 269 0 119 chr17 6057999 6058053 -79380427 - MER5A DNA MER1_type -63 126 96 2376 116 0 0 chr17 6058053 6058363 -79380117 + AluSx SINE Alu 1 310 -2 331 269 0 119 chr17 6058363 6058442 -79380038 - MER5A DNA MER1_type -93 96 9 450 275 76 18 chr17 6058456 6058627 -79379853 + L2 LINE L2 2880 3060 -253 2122 190 47 19 chr17 6058687 6059156 -79379324 - MLT1D LTR MaLR -2 503 22 277 257 67 12 chr17 6059258 6059383 -79379097 + MIR SINE MIR 60 191 -65 184 379 29 19 chr17 6060216 6060319 -79378161 - L2 LINE L2 -19 3294 3191 859 72 7 7 chr17 6060522 6060660 -79377820 + (CA)n Simple_repeat Simple_repeat 2 139 0 3518 148 2 29 chr17 6060673 6060724 -79377756 - L1PA15 LINE L1 0 6165 6114 275 0 0 28 chr17 6060724 6060760 -79377720 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1987 83 0 0 chr17 6060760 6061000 -79377480 - AluSg SINE Alu -31 279 40 3518 148 2 29 chr17 6061000 6061537 -79376943 - L1PA15 LINE L1 -49 6116 5592 2230 101 14 0 chr17 6061685 6061973 -79376507 - AluSc SINE Alu -17 292 1 327 312 71 51 chr17 6062868 6063020 -79375460 + L2 LINE L2 2812 2972 -300 420 20 0 0 chr17 6063020 6063069 -79375411 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 312 71 51 chr17 6063069 6063169 -79375311 + L2 LINE L2 2972 3069 -203 2381 116 0 0 chr17 6063810 6064120 -79374360 + AluSg SINE Alu 1 310 0 2092 104 50 0 chr17 6064650 6064929 -79373551 - AluSq SINE Alu -6 307 15 190 226 0 94 chr17 6065721 6065774 -79372706 - L2 LINE L2 -86 3227 3180 3078 103 53 0 chr17 6065783 6066218 -79372262 + LTR22A LTR ERVK 1 458 0 305 302 133 46 chr17 6066560 6066724 -79371756 + MIR SINE MIR 31 211 -51 1011 191 3 6 chr17 6067306 6067619 -79370861 + (CAT)n Simple_repeat Simple_repeat 2 313 0 541 315 24 33 chr17 6067621 6067834 -79370646 - MIR SINE MIR -1 261 51 2162 108 24 0 chr17 6068093 6068380 -79370100 + AluSg SINE Alu 1 294 -16 365 297 18 0 chr17 6068716 6068827 -79369653 + MIR3 SINE MIR 82 194 -14 2117 125 0 0 chr17 6069242 6069585 -79368895 + AluSg SINE Alu 1 343 0 297 257 28 55 chr17 6069739 6069848 -79368632 + MIR SINE MIR 74 179 -83 596 299 17 17 chr17 6070029 6070203 -79368277 + MIR SINE MIR 41 214 -48 2322 93 14 0 chr17 6070973 6071264 -79367216 - AluSx SINE Alu -17 295 1 627 284 65 20 chr17 6071685 6072040 -79366440 - L1ME3 LINE L1 -277 5885 5515 426 254 27 9 chr17 6072046 6072156 -79366324 - MIR SINE MIR -61 147 36 2139 119 3 7 chr17 6073047 6073357 -79365123 - AluSc SINE Alu 0 309 1 233 361 25 25 chr17 6073358 6073405 -79365075 + L2 LINE L2 3149 3195 -77 253 231 31 0 chr17 6073405 6073470 -79365010 + MIR SINE MIR 193 259 -3 446 299 148 31 chr17 6073855 6074055 -79364425 - MLT1I LTR MaLR 0 409 163 2657 194 56 6 chr17 6074055 6074595 -79363885 + MLT1F1 LTR MaLR 1 567 0 446 299 148 31 chr17 6074595 6074685 -79363795 - MLT1I LTR MaLR -246 163 85 187 283 0 19 chr17 6074825 6074878 -79363602 + L2 LINE L2 2701 2752 -562 187 307 202 23 chr17 6074890 6075108 -79363372 + L2 LINE L2 3016 3272 0 324 161 0 0 chr17 6075111 6075173 -79363307 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 259 282 94 8 chr17 6076083 6076102 -79362378 - MIR SINE MIR -71 191 175 2252 101 0 28 chr17 6076102 6076383 -79362097 + AluY SINE Alu 1 274 -37 218 0 95 0 chr17 6076383 6076425 -79362055 + A-rich Low_complexity Low_complexity 1 46 0 2252 101 0 28 chr17 6076425 6076461 -79362019 + AluY SINE Alu 274 309 -2 259 282 94 8 chr17 6076461 6076558 -79361922 - MIR SINE MIR -87 175 65 482 285 26 65 chr17 6076565 6076781 -79361699 - MIR3 SINE MIR -51 211 3 2724 93 132 5 chr17 6076943 6077374 -79361106 - LTR19A LTR ERV1 0 486 1 642 272 132 55 chr17 6078257 6078800 -79359680 - MLT1H LTR MaLR -3 552 1 611 261 64 80 chr17 6079905 6080154 -79358326 + MIR SINE MIR 2 246 -16 425 268 8 24 chr17 6080202 6080325 -79358155 - MIR SINE MIR -140 122 2 490 257 56 0 chr17 6080332 6080476 -79358004 + MIR SINE MIR 84 235 -27 732 260 28 0 chr17 6080495 6080676 -79357804 + MIR SINE MIR 63 248 -14 2373 89 7 3 chr17 6080738 6081040 -79357440 - AluSx SINE Alu -9 303 1 2324 117 0 3 chr17 6081430 6081737 -79356743 - AluSq SINE Alu -7 306 1 482 297 57 38 chr17 6082063 6082275 -79356205 - MIR SINE MIR 0 262 47 726 184 207 0 chr17 6082302 6082476 -79356004 + MIR SINE MIR 21 230 -32 679 144 18 0 chr17 6082602 6082713 -79355767 + MER5A DNA MER1_type 6 118 -71 1528 213 23 35 chr17 6082713 6082869 -79355611 + MLT1A1 LTR MaLR 1 157 -208 2467 84 0 0 chr17 6082869 6083166 -79355314 + AluSq SINE Alu 1 297 -16 1528 213 23 35 chr17 6083166 6083357 -79355123 + MLT1A1 LTR MaLR 157 344 -21 240 329 0 0 chr17 6083370 6083440 -79355040 + MER5A DNA MER1_type 120 189 0 407 357 55 6 chr17 6083456 6083638 -79354842 + MIR SINE MIR 22 212 -50 206 276 35 0 chr17 6084539 6084597 -79353883 - L3 LINE CR1 -127 1450 1391 625 206 103 7 chr17 6084601 6084747 -79353733 + MER45A DNA AcHobo 16 175 -3 752 267 6 0 chr17 6084880 6085045 -79353435 - MER96 DNA MER1_type? 0 175 10 316 217 0 0 chr17 6085257 6085317 -79353163 + MER5A DNA MER1_type 21 80 -109 2118 162 28 0 chr17 6085324 6085683 -79352797 - L1MB1 LINE L1 -356 5812 5444 351 209 0 0 chr17 6085678 6085745 -79352735 + L1MB1 LINE L1 5839 5905 -263 * 1241 143 10 0 chr17 6085746 6085955 -79352525 + MER2 DNA MER2_type 1 211 -134 225 137 20 20 chr17 6085956 6086007 -79352473 + (TATTG)n Simple_repeat Simple_repeat 3 53 0 1080 175 10 0 chr17 6086083 6086283 -79352197 + L1MB1 LINE L1 5905 6106 -62 1262 131 11 0 chr17 6086294 6086477 -79352003 + AluSg/x SINE Alu 120 304 -8 269 136 0 0 chr17 6086477 6086521 -79351959 + L1MB1 LINE L1 6124 6167 -1 340 221 0 63 chr17 6086540 6086635 -79351845 + MER5A DNA MER1_type 61 149 -40 4155 193 38 10 chr17 6086892 6088048 -79350432 + L1MB4 LINE L1 4944 6135 -45 2022 107 3 40 chr17 6088064 6088364 -79350116 + AluSp SINE Alu 1 289 -24 186 351 39 0 chr17 6088519 6088596 -79349884 - MIR3 SINE MIR -17 191 112 554 239 42 24 chr17 6088876 6089034 -79349446 + MIR3 SINE MIR 34 197 -54 25 0 0 0 chr17 6089034 6089059 -79349421 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr17 6089215 6089252 -79349228 + (TG)n Simple_repeat Simple_repeat 2 38 0 525 288 36 7 chr17 6089340 6089479 -79349001 - MIR SINE MIR -95 167 25 1212 117 0 103 chr17 6089687 6089900 -79348580 + AluSx SINE Alu 1 191 -121 347 85 0 0 chr17 6089904 6089951 -79348529 + AluSc SINE Alu 61 107 -192 1488 113 0 5 chr17 6090006 6090201 -79348279 + AluSg/x SINE Alu 108 301 -11 1529 257 36 5 chr17 6090447 6090859 -79347621 + LTR16A LTR ERVL 26 450 0 1059 238 141 35 chr17 6091597 6092050 -79346430 - MLT1D LTR MaLR -4 501 1 403 297 27 0 chr17 6092324 6092435 -79346045 - MER81 DNA DNA 0 114 1 1103 190 100 35 chr17 6092729 6092883 -79345597 - MLT1C LTR MaLR -2 465 323 2069 116 71 100 chr17 6092883 6093322 -79345158 + MSTA LTR MaLR 3 428 0 1103 190 100 35 chr17 6093322 6093457 -79345023 - MLT1C LTR MaLR -144 323 157 264 362 11 11 chr17 6093489 6093583 -79344897 + L2 LINE L2 3117 3210 -62 259 330 11 11 chr17 6093595 6093686 -79344794 - L3 LINE CR1 -97 1480 1390 754 272 80 34 chr17 6093943 6094267 -79344213 + L1MC4 LINE L1 5391 5729 -392 446 335 41 10 chr17 6094281 6094475 -79344005 + L1MC4 LINE L1 5793 5992 -1816 312 291 75 22 chr17 6095381 6095515 -79342965 + HAL1b LINE L1 1201 1341 -7 400 299 37 43 chr17 6095601 6095788 -79342692 - MIR3 SINE MIR -3 205 20 225 0 0 0 chr17 6097481 6097506 -79340974 + (CA)n Simple_repeat Simple_repeat 1 25 0 380 106 0 15 chr17 6097635 6097676 -79340804 - MLT2B1 LTR ERVL 0 520 479 405 0 0 0 chr17 6097676 6097721 -79340759 + (TG)n Simple_repeat Simple_repeat 2 46 0 380 106 0 15 chr17 6097721 6097745 -79340735 - MLT2B1 LTR ERVL -41 479 456 228 233 33 0 chr17 6097749 6097809 -79340671 + L1MC4 LINE L1 6635 6696 -1346 207 0 0 0 chr17 6097810 6097833 -79340647 + (GA)n Simple_repeat Simple_repeat 2 24 0 1148 185 35 142 chr17 6097839 6098234 -79340246 - MLT2D LTR ERVL -61 353 1 256 227 91 0 chr17 6098311 6098377 -79340103 - MIR SINE MIR -74 188 117 620 289 28 28 chr17 6098404 6098615 -79339865 + MIR SINE MIR 52 262 0 2266 171 76 78 chr17 6099835 6100390 -79338090 + MLT2B3 LTR ERVL 1 554 0 481 263 23 8 chr17 6101112 6101245 -79337235 - LTR16C LTR ERVL 0 491 357 216 191 0 0 chr17 6101346 6101393 -79337087 + T-rich Low_complexity Low_complexity 1 47 0 2246 82 10 3 chr17 6101396 6101699 -79336781 - AluSc SINE Alu -4 305 1 378 276 86 65 chr17 6101701 6101933 -79336547 - LTR16C LTR ERVL -253 238 2 519 358 39 25 chr17 6102043 6102322 -79336158 - L3 LINE CR1 -2 1575 1293 2155 186 86 0 chr17 6102409 6102851 -79335629 + MLT1D LTR MaLR 26 505 0 714 320 114 53 chr17 6102896 6103389 -79335091 - L3 LINE CR1 -354 1223 701 341 267 11 33 chr17 6104022 6104112 -79334368 - L3 LINE CR1 -903 674 587 2543 181 52 81 chr17 6104229 6104582 -79333898 + L1MB5 LINE L1 5258 5312 -862 1669 193 0 3 chr17 6104582 6104882 -79333598 + AluJo SINE Alu 1 299 -13 2543 181 52 81 chr17 6104882 6105389 -79333091 + L1MB5 LINE L1 5312 5832 -342 235 262 82 0 chr17 6105534 6105595 -79332885 + L3 LINE CR1 609 674 -903 597 193 0 17 chr17 6105632 6105751 -79332729 + L1MB5 LINE L1 6058 6174 0 1984 135 66 23 chr17 6105802 6106151 -79332329 - THE1B LTR MaLR 0 364 1 228 143 41 0 chr17 6106760 6106809 -79331671 + MER112 DNA MER1_type 106 156 -104 1945 130 33 0 chr17 6107160 6107460 -79331020 + AluSg SINE Alu 1 310 0 320 327 46 7 chr17 6107806 6108081 -79330399 + L1ME LINE L1 5373 5704 -417 433 268 41 8 chr17 6108145 6108268 -79330212 - MIR SINE MIR -51 211 85 430 182 0 0 chr17 6108350 6108416 -79330064 - L2 LINE L2 0 3272 3207 239 200 20 0 chr17 6108663 6108713 -79329767 - L2 LINE L2 0 3313 3263 1959 123 0 3 chr17 6108787 6109087 -79329393 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr17 6109202 6109225 -79329255 + AT_rich Low_complexity Low_complexity 1 23 0 324 75 15 30 chr17 6109564 6109631 -79328849 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2121 55 7 0 chr17 6109786 6110058 -79328422 - AluY SINE Alu -1 310 37 439 70 42 0 chr17 6110068 6110139 -79328341 + T-rich Low_complexity Low_complexity 3 76 0 1641 178 10 0 chr17 6110141 6110444 -79328036 - AluSg SINE Alu -4 306 1 278 314 32 8 chr17 6111188 6111312 -79327168 + HAL1 LINE L1 23 149 -2358 2060 103 3 3 chr17 6111326 6111618 -79326862 + AluSq SINE Alu 1 292 -21 1077 171 6 0 chr17 6111939 6112115 -79326365 - MLT1F1 LTR MaLR 0 567 391 585 267 48 0 chr17 6112085 6112231 -79326249 + MER58B DNA MER1_type 150 302 -39 * 714 210 8 0 chr17 6112238 6112362 -79326118 - MER58B DNA MER1_type -22 319 195 * 1539 196 149 9 chr17 6112351 6112687 -79325793 - MLT1F1 LTR MaLR -184 383 1 782 274 71 110 chr17 6112758 6113544 -79324936 + HAL1 LINE L1 745 1471 -1036 1238 204 14 5 chr17 6113544 6113765 -79324715 + MER58A DNA MER1_type 2 224 0 782 274 71 110 chr17 6113765 6114169 -79324311 + HAL1 LINE L1 1471 1889 -618 2100 116 7 7 chr17 6115036 6115339 -79323141 + AluSq SINE Alu 1 303 -10 1919 118 3 41 chr17 6115758 6116073 -79322407 - AluSx SINE Alu -9 303 1 483 203 15 68 chr17 6116519 6116652 -79321828 - MIR SINE MIR -115 147 22 264 273 0 30 chr17 6117733 6117838 -79320642 + (CACG)n Simple_repeat Simple_repeat 1 101 0 2065 118 17 0 chr17 6118557 6118853 -79319627 + AluSx SINE Alu 1 301 -11 264 301 110 43 chr17 6119199 6119408 -79319072 - L2 LINE L2 -526 2788 2566 387 211 0 0 chr17 6119568 6119658 -79318822 + (CA)n Simple_repeat Simple_repeat 1 90 0 621 257 0 0 chr17 6119705 6119884 -79318596 + (CA)n Simple_repeat Simple_repeat 1 179 0 223 223 202 32 chr17 6120058 6120152 -79318328 - MIR SINE MIR -82 126 17 181 256 0 0 chr17 6120166 6120209 -79318271 - MIR3 SINE MIR -26 182 140 341 248 87 52 chr17 6120608 6120763 -79317717 + MIR3 SINE MIR 35 192 -42 1970 104 3 10 chr17 6120888 6121200 -79317280 + AluY SINE Alu 3 312 0 748 254 174 40 chr17 6121204 6121601 -79316879 - MLT1J LTR MaLR -51 460 11 184 321 71 0 chr17 6121829 6121913 -79316567 - L2 LINE L2 -695 2619 2530 275 227 91 11 chr17 6123182 6123270 -79315210 + L2 LINE L2 2916 3010 -262 210 276 92 40 chr17 6123248 6123324 -79315156 + L2 LINE L2 2722 2801 -513 * 407 257 20 10 chr17 6123341 6123442 -79315038 + MER94 DNA DNA 19 120 -14 555 308 86 4 chr17 6123452 6123686 -79314794 + L2 LINE L2 2809 3061 -252 1032 285 98 21 chr17 6124156 6124535 -79313945 - MLT1K LTR MaLR -34 554 147 246 266 42 112 chr17 6124690 6124833 -79313647 + MIR SINE MIR 60 192 -70 317 287 144 35 chr17 6125789 6125963 -79312517 + MIR SINE MIR 18 210 -52 1875 141 7 0 chr17 6126173 6126470 -79312010 - AluSg SINE Alu 0 310 12 432 236 34 0 chr17 6126603 6126692 -79311788 + L1MC5 LINE L1 7810 7901 -60 211 379 15 0 chr17 6127053 6127119 -79311361 - MIR SINE MIR -108 100 34 467 216 28 102 chr17 6127251 6127427 -79311053 - MIR SINE MIR -1 261 99 300 264 55 11 chr17 6127530 6127621 -79310859 - L1ME LINE L1 -340 5781 5687 384 248 38 53 chr17 6127640 6127773 -79310707 + L2 LINE L2 3180 3310 -3 439 141 22 0 chr17 6127796 6127888 -79310592 + GA-rich Low_complexity Low_complexity 1 94 0 662 216 24 72 chr17 6128005 6128049 -79310431 - MER5B DNA MER1_type 0 178 133 2382 63 0 10 chr17 6128049 6128349 -79310131 - AluSg SINE Alu -13 297 1 662 216 24 72 chr17 6128349 6128471 -79310009 - MER5B DNA MER1_type -45 133 20 465 293 18 24 chr17 6128705 6128869 -79309611 + MER5A DNA MER1_type 26 188 -1 414 255 114 62 chr17 6129540 6129865 -79308615 - HAL1 LINE L1 -832 1675 1334 395 198 127 32 chr17 6129899 6130025 -79308455 - MIR SINE MIR -17 245 108 2108 124 0 7 chr17 6130762 6131068 -79307412 + AluSx SINE Alu 1 304 -8 1974 156 122 64 chr17 6131612 6132094 -79306386 + MLT2B1 LTR ERVL 3 512 -8 287 116 0 116 chr17 6132360 6132429 -79306051 + MLT1K LTR MaLR 182 242 -346 246 235 20 0 chr17 6132396 6132447 -79306033 + MLT1K LTR MaLR 141 192 -396 * 315 291 106 70 chr17 6133186 6133543 -79304937 + L2 LINE L2 2450 2819 -495 2402 69 0 0 chr17 6134579 6134882 -79303598 - AluY SINE Alu -8 303 1 193 294 0 0 chr17 6135398 6135449 -79303031 + L2 LINE L2 2487 2537 -777 2241 141 19 14 chr17 6135549 6135912 -79302568 - LTR45B LTR ERV1 -101 388 24 1824 147 7 3 chr17 6135912 6136205 -79302275 + AluSx SINE Alu 1 294 -18 889 237 163 50 chr17 6136247 6136419 -79302061 + L2 LINE L2 2536 2687 -626 2033 83 3 53 chr17 6136419 6136744 -79301736 + AluSp SINE Alu 1 310 0 889 237 163 50 chr17 6136744 6137169 -79301311 + L2 LINE L2 2687 3221 -92 316 260 10 0 chr17 6137241 6137341 -79301139 - L1MC4 LINE L1 -17 8025 7925 206 214 0 0 chr17 6137345 6137387 -79301093 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1926 141 3 10 chr17 6137410 6137722 -79300758 - AluSg SINE Alu 0 310 1 570 216 20 40 chr17 6137843 6138011 -79300469 - L1ME2 LINE L1 -5 6161 5997 463 259 0 28 chr17 6138012 6138120 -79300360 + L2 LINE L2 3209 3313 0 2138 121 0 0 chr17 6138565 6138863 -79299617 - AluSq SINE Alu -15 298 1 528 16 0 0 chr17 6139074 6139135 -79299345 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 327 144 26 chr17 6139504 6139657 -79298823 - L2 LINE L2 -1 3271 3101 242 321 47 0 chr17 6140229 6140335 -79298145 + L2 LINE L2 2550 2660 -654 333 0 0 0 chr17 6141348 6141385 -79297095 + (TG)n Simple_repeat Simple_repeat 2 38 0 2011 119 20 0 chr17 6142617 6142910 -79295570 - AluSx SINE Alu -13 299 1 1958 139 0 3 chr17 6142932 6143235 -79295245 - AluSx SINE Alu 0 312 11 1993 126 0 0 chr17 6143250 6143543 -79294937 - AluSx SINE Alu -11 301 9 1886 125 21 4 chr17 6143544 6143825 -79294655 - AluSx SINE Alu -26 286 1 629 304 65 42 chr17 6143866 6144221 -79294259 + L2 LINE L2 2910 3272 0 2448 81 0 0 chr17 6144222 6144520 -79293960 + AluY SINE Alu 1 298 -13 818 163 0 0 chr17 6144953 6145076 -79293404 - AluJo SINE Alu -22 290 168 816 134 0 0 chr17 6145078 6145190 -79293290 - AluJo SINE Alu -200 112 1 430 327 72 33 chr17 6146744 6147050 -79291430 + L1ME4a LINE L1 3459 3776 -2370 487 154 0 11 chr17 6147189 6147280 -79291200 + MLT1C LTR MaLR 1 90 -377 2323 113 3 0 chr17 6147298 6147607 -79290873 - AluSx SINE Alu -2 310 1 202 362 0 0 chr17 6147646 6147715 -79290765 + GA-rich Low_complexity Low_complexity 3 71 0 2097 50 0 12 chr17 6147887 6148146 -79290334 + L1PA8 LINE L1 5913 6168 -4 408 321 137 50 chr17 6148617 6149090 -79289390 + L1ME4a LINE L1 4726 5253 -893 255 301 83 68 chr17 6149091 6149228 -79289252 + L1ME4a LINE L1 5255 5388 -733 2188 118 16 3 chr17 6149228 6149534 -79288946 + AluSg SINE Alu 1 310 0 255 301 83 68 chr17 6149534 6149722 -79288758 + L1ME4a LINE L1 5388 5585 -536 262 300 74 33 chr17 6150363 6150876 -79287604 + L1ME4a LINE L1 5588 6121 0 898 283 118 30 chr17 6151740 6152118 -79286362 + L1MEd LINE L1 9 352 -5958 2196 120 0 13 chr17 6152118 6152434 -79286046 + AluSx SINE Alu 1 312 0 898 283 118 30 chr17 6152434 6152902 -79285578 + L1MEd LINE L1 352 777 -5533 2298 104 0 7 chr17 6152902 6153199 -79285281 + AluSp SINE Alu 1 295 -18 898 283 118 30 chr17 6153199 6153819 -79284661 + L1MEd LINE L1 777 1669 -4641 248 214 36 0 chr17 6154847 6154903 -79283577 + MER53 DNA DNA 132 189 0 250 235 49 25 chr17 6154916 6154997 -79283483 - MLT1K LTR MaLR -342 246 164 2096 76 11 4 chr17 6155086 6155349 -79283131 + AluSg SINE Alu 34 298 -12 834 185 93 6 chr17 6155626 6155788 -79282692 - MER5B DNA MER1_type -2 176 1 1461 127 162 4 chr17 6155935 6156188 -79282292 + AluSx SINE Alu 1 293 -19 2411 61 0 38 chr17 6156206 6156519 -79281961 + AluY SINE Alu 5 305 -6 306 201 71 32 chr17 6156580 6156734 -79281746 + L1ME4a LINE L1 5962 6121 0 558 290 51 19 chr17 6157758 6157972 -79280508 + MIR SINE MIR 25 245 -17 196 330 20 30 chr17 6158008 6158108 -79280372 + L2 LINE L2 3001 3099 -173 359 273 106 15 chr17 6159201 6159333 -79279147 + MIR3 SINE MIR 56 199 -9 1875 238 74 6 chr17 6159937 6160559 -79277921 + L1MEd LINE L1 2577 3240 -2889 645 165 0 31 chr17 6160560 6160687 -79277793 + MLT1A1 LTR MaLR 197 319 -46 3935 238 60 47 chr17 6160690 6161462 -79277018 + L1MEd LINE L1 3235 3996 -2149 2488 70 0 0 chr17 6161462 6161760 -79276720 + AluY SINE Alu 1 298 -13 3935 238 60 47 chr17 6161760 6162136 -79276344 + L1MEd LINE L1 3996 4366 -1779 1864 161 0 24 chr17 6162136 6162427 -79276053 - AluJb SINE Alu -14 298 15 3935 238 60 47 chr17 6162427 6163467 -79275013 + L1MEd LINE L1 4366 5449 -696 316 222 56 0 chr17 6163644 6163716 -79274764 - HERVL LTR ERVL -848 4806 4731 593 236 25 6 chr17 6163842 6163999 -79274481 + L1MB7 LINE L1 6007 6166 -18 2208 129 3 0 chr17 6164342 6164653 -79273827 + AluSx SINE Alu 1 312 0 1004 120 0 0 chr17 6164671 6164804 -79273676 + AluSg SINE Alu 1 133 -177 2129 138 3 3 chr17 6164804 6165115 -79273365 + AluSx SINE Alu 1 311 -1 403 213 13 20 chr17 6165115 6165265 -79273215 + GA-rich Low_complexity Low_complexity 2 150 0 385 225 96 53 chr17 6165830 6165992 -79272488 + L1M4 LINE L1 5069 5243 -903 4161 4 0 0 chr17 6165992 6166450 -79272030 + L1PA2 LINE L1 5698 6155 0 385 225 96 53 chr17 6166450 6166496 -79271984 + L1M4 LINE L1 5243 5286 -860 220 27 54 0 chr17 6166550 6166587 -79271893 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 539 186 155 0 chr17 6166600 6166793 -79271687 + L1ME1 LINE L1 5218 5440 -722 1355 112 0 0 chr17 6166793 6166963 -79271517 + AluSq SINE Alu 1 170 -143 735 273 62 32 chr17 6166964 6167305 -79271175 + L1ME1 LINE L1 5810 6160 -6 586 206 18 42 chr17 6167339 6167504 -79270976 - MLT1J1 LTR MaLR -285 161 1 240 309 41 24 chr17 6168376 6168499 -79269981 - MIR3 SINE MIR -48 160 36 2259 72 3 52 chr17 6168523 6168850 -79269630 + AluSq SINE Alu 2 313 0 2294 121 0 0 chr17 6169009 6169315 -79269165 + AluSx SINE Alu 1 306 -6 1140 157 0 5 chr17 6171069 6171266 -79267214 - MLT1D LTR MaLR 0 505 310 542 208 66 85 chr17 6171305 6171517 -79266963 - MLT1D LTR MaLR -295 210 3 1426 49 5 16 chr17 6171761 6171945 -79266535 - L1PA7 LINE L1 -1 6153 5972 291 297 93 0 chr17 6172695 6172813 -79265667 - MIR3 SINE MIR -46 162 34 267 54 0 0 chr17 6173843 6173880 -79264600 + (CAGGG)n Simple_repeat Simple_repeat 2 38 0 284 247 75 21 chr17 6174096 6174189 -79264291 + MIR3 SINE MIR 87 184 -24 233 351 9 0 chr17 6175140 6175251 -79263229 - L3 LINE CR1 -36 1541 1430 580 329 50 22 chr17 6175471 6175693 -79262787 - MIR SINE MIR -26 236 9 192 97 0 0 chr17 6176504 6176535 -79261945 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 416 59 0 0 chr17 6176668 6176719 -79261761 - AluSp/q SINE Alu -37 276 226 2383 100 0 0 chr17 6177402 6177702 -79260778 + AluSg SINE Alu 1 300 -10 2376 98 3 9 chr17 6177771 6178086 -79260394 + AluSp SINE Alu 1 313 0 3988 64 14 50 chr17 6178479 6178806 -79259674 + L1PA8 LINE L1 5619 5918 -254 2417 108 0 0 chr17 6178806 6179112 -79259368 + AluSc SINE Alu 1 306 -3 3988 64 14 50 chr17 6179112 6179359 -79259121 + L1PA8 LINE L1 5918 6172 0 2262 54 0 0 chr17 6180011 6180271 -79258209 - AluSc SINE Alu -49 260 1 2198 109 13 16 chr17 6181043 6181347 -79257133 + AluSg SINE Alu 1 303 -7 204 280 120 13 chr17 6182168 6182243 -79256237 - MIR SINE MIR -1 261 179 361 127 0 0 chr17 6182243 6182298 -79256182 + MSTD LTR MaLR 1 55 -341 2430 83 0 3 chr17 6182316 6182616 -79255864 - AluSq SINE Alu -14 299 1 447 311 61 25 chr17 6182634 6182830 -79255650 + L1ME3 LINE L1 5766 5968 -202 1012 172 27 11 chr17 6183012 6183198 -79255282 - AluJo SINE Alu -4 308 120 1763 138 32 0 chr17 6183311 6183622 -79254858 - L1MA5A LINE L1 0 6297 5977 249 105 0 0 chr17 6183628 6183666 -79254814 + MLT1A2 LTR MaLR 75 112 -262 2748 204 35 24 chr17 6184130 6184761 -79253719 + LTR9B LTR ERV1 7 644 0 248 241 46 22 chr17 6184849 6184918 -79253562 + L1ME3 LINE L1 6025 6091 -79 1057 175 5 63 chr17 6184918 6185090 -79253390 + MER6B DNA MER2_type 1 159 -706 2143 107 0 67 chr17 6185090 6185417 -79253063 - AluSq SINE Alu -8 305 1 1057 175 5 63 chr17 6185417 6185467 -79253013 + MER6B DNA MER2_type 159 210 0 248 241 46 22 chr17 6185467 6185533 -79252947 + L1ME3 LINE L1 6091 6163 -7 312 91 0 0 chr17 6185934 6185978 -79252502 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 2105 117 7 26 chr17 6185978 6186287 -79252193 - AluSx SINE Alu -9 303 1 299 320 0 13 chr17 6186290 6186368 -79252112 - L3 LINE CR1 -1269 308 232 2391 74 0 10 chr17 6186937 6187236 -79251244 - AluSg SINE Alu -13 297 2 551 308 128 4 chr17 6188476 6188710 -79249770 - L2 LINE L2 -95 3177 2915 566 204 71 0 chr17 6189289 6189402 -79249078 + L2 LINE L2 3193 3313 0 207 213 0 43 chr17 6190268 6190315 -79248165 - MIR SINE MIR -88 120 79 321 345 34 14 chr17 6190432 6190580 -79247900 - L2 LINE L2 -529 2785 2635 2366 95 0 13 chr17 6190905 6191221 -79247259 - AluSx SINE Alu 0 312 1 2439 83 3 0 chr17 6191807 6192108 -79246372 + AluSx SINE Alu 1 302 -10 302 344 32 8 chr17 6192390 6192515 -79245965 - MIR SINE MIR -96 166 39 362 206 54 11 chr17 6193378 6193470 -79245010 + MIR3 SINE MIR 65 160 -48 219 253 101 25 chr17 6194533 6194612 -79243868 + MIR3 SINE MIR 102 186 -22 1075 207 45 5 chr17 6196645 6196867 -79241613 - AluJo SINE Alu -81 231 1 465 224 164 55 chr17 6197026 6197191 -79241289 + MER5A DNA MER1_type 4 186 -3 215 358 94 35 chr17 6197194 6197596 -79240884 + L2 LINE L2 2263 2688 -626 * 346 336 114 57 chr17 6197595 6198032 -79240448 + L2 LINE L2 2811 3272 0 237 65 0 0 chr17 6198044 6198075 -79240405 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 207 100 0 0 chr17 6200172 6200202 -79238278 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 281 347 32 0 chr17 6200203 6200298 -79238182 - L2 LINE L2 -13 3300 3203 499 332 72 11 chr17 6200362 6200624 -79237856 + L2 LINE L2 2481 2758 -556 272 325 179 51 chr17 6200887 6201222 -79237258 + L3 LINE CR1 1180 1557 -20 443 242 147 19 chr17 6201658 6201815 -79236665 - MIR SINE MIR -70 192 16 929 258 141 42 chr17 6202111 6202665 -79235815 + L1MC4a LINE L1 5364 5972 -1836 314 316 15 0 chr17 6203678 6203811 -79234669 + LTR33 LTR ERVL 382 516 -5 331 316 129 59 chr17 6203848 6204322 -79234158 + L2 LINE L2 2807 3313 0 763 49 0 0 chr17 6205384 6205486 -79232994 - L1P3 LINE L1 -357 5797 5696 223 342 13 0 chr17 6205566 6205642 -79232838 + MIR3 SINE MIR 101 177 -31 352 142 0 57 chr17 6205731 6205808 -79232672 + MIR SINE MIR 103 172 -90 253 303 74 33 chr17 6206233 6206355 -79232125 + L2 LINE L2 3145 3271 -1 1990 95 29 0 chr17 6206391 6206716 -79231764 + AluSg SINE Alu 1 333 0 239 274 27 0 chr17 6206964 6207037 -79231443 + MIR SINE MIR 65 139 -69 876 73 0 0 chr17 6207809 6207918 -79230562 + AluSq/x SINE Alu 25 133 -180 2044 127 0 10 chr17 6207926 6208225 -79230255 + AluSx SINE Alu 1 296 -16 478 290 34 0 chr17 6208326 6208502 -79229978 - MLT1J2 LTR MaLR -259 191 10 1660 65 9 13 chr17 6209482 6209712 -79228768 + AluSc SINE Alu 1 229 -80 1322 175 77 17 chr17 6209920 6210217 -79228263 - MER58B DNA MER1_type 0 341 27 583 189 42 100 chr17 6210248 6210438 -79228042 - MER5A DNA MER1_type 0 189 11 232 279 76 25 chr17 6210508 6210587 -79227893 + L2 LINE L2 3187 3269 -3 261 229 157 0 chr17 6210637 6210720 -79227760 + MIR SINE MIR 87 182 -80 493 214 0 103 chr17 6211538 6211683 -79226797 + MIR SINE MIR 79 208 -54 209 307 113 31 chr17 6211717 6212079 -79226401 + L2 LINE L2 2669 3096 -176 231 291 74 40 chr17 6212204 6212379 -79226101 - MER5A DNA MER1_type -5 184 4 516 170 0 0 chr17 6212901 6213007 -79225473 + GA-rich Low_complexity Low_complexity 4 109 0 229 380 65 0 chr17 6213015 6213107 -79225373 - MIR SINE MIR -81 127 30 2072 96 24 10 chr17 6214489 6214831 -79223649 - AluSp SINE Alu 0 313 1 195 389 0 0 chr17 6214893 6214965 -79223515 + L2 LINE L2 2427 2498 -816 305 254 40 63 chr17 6214980 6215106 -79223374 - L1MC5 LINE L1 -29 7932 7810 2495 173 16 42 chr17 6215964 6216331 -79222149 + L1MB8 LINE L1 5375 5723 -455 1463 106 55 0 chr17 6216331 6216369 -79222111 + AluSg/x SINE Alu 82 116 -194 206 32 32 0 chr17 6216369 6216400 -79222080 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1463 106 55 0 chr17 6216400 6216578 -79221902 + AluSg/x SINE Alu 116 310 0 2495 173 16 42 chr17 6216578 6216781 -79221699 + L1MB8 LINE L1 5723 5930 -248 189 0 0 0 chr17 6216881 6216902 -79221578 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 700 183 137 0 chr17 6217166 6217297 -79221183 + AluSx SINE Alu 42 190 -122 470 317 128 32 chr17 6217345 6217815 -79220665 + L2 LINE L2 2350 2864 -450 253 323 40 32 chr17 6217970 6218094 -79220386 + L2 LINE L2 2677 2801 -513 201 264 0 85 chr17 6220085 6220214 -79218266 + L2 LINE L2 2932 3049 -223 334 393 9 5 chr17 6220940 6221159 -79217321 + L2 LINE L2 2871 3090 -182 2340 89 0 0 chr17 6221613 6221916 -79216564 + AluSx SINE Alu 1 303 -9 740 257 23 0 chr17 6222723 6222898 -79215582 - MER58A DNA MER1_type -1 223 45 2341 106 0 0 chr17 6223725 6224037 -79214443 - AluSx SINE Alu 0 312 1 255 277 62 39 chr17 6224920 6225050 -79213430 - L2 LINE L2 -219 3053 2921 337 264 20 81 chr17 6225559 6225707 -79212773 + L3b LINE CR1 1290 1428 -155 285 219 106 41 chr17 6225888 6226011 -79212469 + MER5A DNA MER1_type 29 159 -30 185 324 66 44 chr17 6225903 6226039 -79212441 - MER5B DNA MER1_type -37 141 3 * 666 294 108 5 chr17 6227219 6227423 -79211057 - MIR SINE MIR -22 240 16 2418 175 88 63 chr17 6227564 6228195 -79210285 + MER21B LTR ERV1 267 861 -2 2309 91 0 0 chr17 6228294 6228590 -79209890 - AluY SINE Alu -15 296 1 270 160 0 0 chr17 6229163 6229213 -79209267 + (CA)n Simple_repeat Simple_repeat 2 51 0 295 290 121 2 chr17 6229358 6229511 -79208969 - MIR3 SINE MIR -16 192 23 1874 192 32 68 chr17 6230032 6230498 -79207982 + MLT2B1 LTR ERVL 1 447 -73 2359 78 10 0 chr17 6230498 6230804 -79207676 - AluSp SINE Alu -4 309 1 1874 192 32 68 chr17 6230804 6230868 -79207612 + MLT2B1 LTR ERVL 447 512 -8 1157 195 32 18 chr17 6231146 6231367 -79207113 + MER58A DNA MER1_type 1 224 0 246 32 0 0 chr17 6232883 6232914 -79205566 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 398 20 20 0 chr17 6232913 6232964 -79205516 + (TA)n Simple_repeat Simple_repeat 1 52 0 2300 111 0 0 chr17 6233323 6233629 -79204851 - AluSg SINE Alu -4 306 1 300 191 236 0 chr17 6233826 6233915 -79204565 + LTR16A1 LTR ERVL 7 116 -341 * 995 146 18 0 chr17 6233914 6234085 -79204395 + MER58A DNA MER1_type 42 215 -9 679 309 52 4 chr17 6234130 6234399 -79204081 + LTR16A1 LTR ERVL 170 451 -6 2164 123 3 0 chr17 6234732 6235041 -79203439 - AluY SINE Alu -1 310 1 387 304 200 24 chr17 6235120 6235370 -79203110 - L2 LINE L2 0 3272 2979 204 350 47 47 chr17 6235521 6235795 -79202685 - L2 LINE L2 -169 3103 2830 255 344 64 57 chr17 6235841 6236123 -79202357 - L2 LINE L2 -569 2745 2462 292 268 57 32 chr17 6236150 6236273 -79202207 + MIR3 SINE MIR 72 197 -11 572 309 80 0 chr17 6236282 6236483 -79201997 - MIR SINE MIR -41 221 5 379 324 84 6 chr17 6236779 6236958 -79201522 - MLT1J2 LTR MaLR 0 450 258 2385 77 0 0 chr17 6236973 6237271 -79201209 - AluY SINE Alu -11 300 3 1896 141 3 10 chr17 6237273 6237579 -79200901 - AluSq SINE Alu -9 304 1 916 127 18 6 chr17 6237581 6237746 -79200734 - MER58A DNA MER1_type -8 216 50 328 253 11 23 chr17 6237753 6237840 -79200640 - MER58A DNA MER1_type -12 95 10 265 263 95 80 chr17 6238055 6238192 -79200288 - L2 LINE L2 0 3272 3134 1154 186 4 72 chr17 6238298 6238561 -79199919 + AluJo SINE Alu 55 299 -13 272 286 39 0 chr17 6238583 6238660 -79199820 + L2 LINE L2 3162 3241 -31 180 0 0 0 chr17 6238675 6238695 -79199785 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 2186 88 3 33 chr17 6238958 6239263 -79199217 - AluSx SINE Alu -16 296 1 330 327 6 42 chr17 6239335 6239500 -79198980 - MIR3 SINE MIR -35 173 15 2381 64 0 0 chr17 6239575 6239872 -79198608 - AluY SINE Alu -14 297 1 497 68 0 0 chr17 6239893 6239967 -79198513 - Alu SINE Alu 0 310 237 285 366 55 12 chr17 6240077 6240241 -79198239 - L2 LINE L2 -43 3270 3100 651 311 88 26 chr17 6240332 6240454 -79198026 - LTR33 LTR ERVL -3 518 405 4222 34 4 0 chr17 6240454 6240951 -79197529 + L1PA4 LINE L1 5657 6155 0 651 311 88 26 chr17 6240951 6241282 -79197198 - LTR33 LTR ERVL -116 405 37 2642 297 110 36 chr17 6241329 6242271 -79196209 + HAL1 LINE L1 26 897 -1610 2315 97 0 0 chr17 6242271 6242571 -79195909 + AluSx SINE Alu 1 300 -12 2642 297 110 36 chr17 6242571 6242892 -79195588 + HAL1 LINE L1 897 1193 -1314 2729 106 3 5 chr17 6242892 6243268 -79195212 - THE1C LTR MaLR 0 375 1 2642 297 110 36 chr17 6243268 6243369 -79195111 + HAL1 LINE L1 1193 1285 -1222 2692 154 12 51 chr17 6243369 6243787 -79194693 + MLT1C LTR MaLR 1 399 -68 1775 119 47 72 chr17 6243787 6244106 -79194374 - AluJo SINE Alu -1 311 1 2692 154 12 51 chr17 6244106 6244173 -79194307 + MLT1C LTR MaLR 399 467 0 2642 297 110 36 chr17 6244173 6244691 -79193789 + HAL1 LINE L1 1285 2050 -457 1070 282 102 15 chr17 6244691 6245092 -79193388 - L2 LINE L2 -26 3287 2852 1358 281 54 30 chr17 6245106 6245518 -79192962 - L2 LINE L2 -579 2735 2305 2184 201 24 72 chr17 6245518 6246100 -79192380 + MLT2B3 LTR ERVL 1 554 0 1358 281 54 30 chr17 6246100 6246225 -79192255 - L2 LINE L2 -1009 2305 2185 425 294 23 60 chr17 6246239 6246504 -79191976 + HAL1 LINE L1 2055 2309 -198 2345 133 72 8 chr17 6246855 6247255 -79191225 - MSTA LTR MaLR -2 426 1 405 70 0 0 chr17 6248171 6248228 -79190252 + (TC)n Simple_repeat Simple_repeat 2 58 0 1179 189 18 14 chr17 6248240 6248462 -79190018 - AluJo SINE Alu -16 296 74 2157 90 0 4 chr17 6248569 6248848 -79189632 - AluSx SINE Alu -34 278 1 2450 286 69 24 chr17 6249672 6250999 -79187481 - L1MEc LINE L1 -4410 1986 600 359 266 276 16 chr17 6251086 6251277 -79187203 - MLT1H1 LTR MaLR -189 366 126 1293 212 146 35 chr17 6251277 6251674 -79186806 + MLT2B1 LTR ERVL 1 441 -79 258 32 0 0 chr17 6251680 6251711 -79186769 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 69 0 0 chr17 6251716 6251745 -79186735 + (TATG)n Simple_repeat Simple_repeat 3 31 0 29 0 0 62 chr17 6251748 6251796 -79186684 + AT_rich Low_complexity Low_complexity 1 45 0 372 197 0 0 chr17 6251812 6251878 -79186602 - Tigger5 DNA MER2_type 0 2323 2258 270 141 0 109 chr17 6251933 6251997 -79186483 - Tigger5 DNA MER2_type 0 2323 2267 246 116 0 0 chr17 6252008 6252051 -79186429 + (TG)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr17 6252152 6252194 -79186286 + (TG)n Simple_repeat Simple_repeat 2 43 0 294 77 0 0 chr17 6252200 6252239 -79186241 + MLT2D LTR ERVL 376 414 0 * 402 240 117 13 chr17 6252239 6252377 -79186103 - MLT1H LTR MaLR -421 174 1 1162 152 165 9 chr17 6252383 6252692 -79185788 + MSTA LTR MaLR 1 406 -26 2108 108 3 3 chr17 6252701 6252987 -79185493 - AluSg SINE Alu -1 309 24 281 139 0 0 chr17 6252994 6253037 -79185443 + MSTA LTR MaLR 386 428 0 1412 251 101 6 chr17 6253039 6253545 -79184935 - MER20B DNA MER1_type -61 722 169 318 331 13 53 chr17 6255086 6255237 -79183243 + L2 LINE L2 2607 2751 -563 231 167 0 91 chr17 6255333 6255399 -79183081 + MIR SINE MIR 132 191 -71 555 85 0 0 chr17 6255444 6255526 -79182954 + (CAT)n Simple_repeat Simple_repeat 1 82 0 537 110 30 0 chr17 6256404 6256504 -79181976 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 263 306 153 8 chr17 6256504 6256628 -79181852 - L2 LINE L2 -4 3309 3168 197 341 57 16 chr17 6257248 6257371 -79181109 - MIR3 SINE MIR -78 130 3 827 200 107 19 chr17 6257464 6257669 -79180811 + MIR SINE MIR 16 238 -24 2205 130 0 13 chr17 6258187 6258495 -79179985 + AluSx SINE Alu 2 305 -7 356 206 66 110 chr17 6258849 6258985 -79179495 + MER91B DNA MER1_type 1 130 -60 342 218 0 12 chr17 6259000 6259081 -79179399 + MER91B DNA MER1_type 90 175 -21 193 148 0 148 chr17 6260125 6260186 -79178294 - MIR SINE MIR -56 206 155 379 211 11 0 chr17 6260193 6260283 -79178197 - MER69A DNA AcHobo -23 154 64 262 141 0 141 chr17 6260303 6260367 -79178113 - MIR SINE MIR -105 157 103 358 257 81 95 chr17 6260945 6261155 -79177325 - HAL1 LINE L1 -1 2506 2300 472 202 0 21 chr17 6261327 6261421 -79177059 - MER66B LTR ERV1 0 486 395 2481 89 0 6 chr17 6261441 6261754 -79176726 + AluSq SINE Alu 1 311 -2 1546 182 42 7 chr17 6261829 6262137 -79176343 - MER66B LTR ERV1 -141 345 27 2319 86 3 26 chr17 6262750 6263063 -79175417 - AluSx SINE Alu -6 306 1 298 211 88 70 chr17 6264254 6264368 -79174112 - MIR3 SINE MIR -6 202 87 626 0 14 0 chr17 6264399 6264473 -79174007 + (TTTTC)n Simple_repeat Simple_repeat 5 79 0 1874 181 65 65 chr17 6264840 6265267 -79173213 - MLT1D LTR MaLR -5 500 71 2408 94 0 0 chr17 6265267 6265566 -79172914 + AluSx SINE Alu 2 300 -12 1874 181 65 65 chr17 6265566 6265631 -79172849 - MLT1D LTR MaLR -433 72 8 418 248 10 10 chr17 6266533 6266634 -79171846 + L2 LINE L2 3209 3309 -4 194 304 18 0 chr17 6266675 6266731 -79171749 - MIR3 SINE MIR -31 177 121 1196 239 64 0 chr17 6266734 6267031 -79171449 + MER90 LTR ERV1 297 612 -2 310 363 73 0 chr17 6267258 6267462 -79171018 - L2 LINE L2 -522 2792 2574 2398 104 0 0 chr17 6268074 6268381 -79170099 - AluSq SINE Alu -6 307 1 1260 239 144 17 chr17 6268496 6268906 -79169574 - MLT1C LTR MaLR -5 462 1 203 357 123 7 chr17 6270041 6270195 -79168285 - L2 LINE L2 -544 2770 2599 579 193 36 94 chr17 6270275 6270467 -79168013 + MER91B DNA MER1_type 4 184 -6 558 254 75 10 chr17 6270999 6271200 -79167280 + LTR33 LTR ERVL 1 214 -307 238 290 122 36 chr17 6272297 6272576 -79165904 - L2 LINE L2 -653 2661 2359 409 306 31 83 chr17 6273329 6273443 -79165037 - MIR SINE MIR 0 262 164 2083 122 7 3 chr17 6273443 6273774 -79164706 - AluSx SINE Alu 0 312 2 409 306 31 83 chr17 6273774 6273888 -79164592 - MIR SINE MIR -98 164 46 2293 119 0 0 chr17 6274425 6274720 -79163760 - AluSx SINE Alu -17 295 1 1395 229 44 11 chr17 6275011 6275374 -79163106 + MER74B LTR ERVL 56 430 -192 336 239 11 34 chr17 6275542 6275630 -79162850 + MER74B LTR ERVL 447 532 -90 2023 135 0 20 chr17 6275916 6276219 -79162261 + AluSx SINE Alu 5 301 -11 874 245 5 33 chr17 6278473 6278637 -79159843 + MIR SINE MIR 45 212 -50 2346 99 3 7 chr17 6278637 6278940 -79159540 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr17 6278940 6278963 -79159517 + (TA)n Simple_repeat Simple_repeat 2 24 0 874 245 5 33 chr17 6278963 6279009 -79159471 + MIR SINE MIR 210 250 -12 203 218 141 39 chr17 6279465 6279543 -79158937 - L2 LINE L2 -3 3310 3225 239 222 0 0 chr17 6279829 6279874 -79158606 - MIR SINE MIR -68 140 96 2247 278 75 56 chr17 6279920 6280105 -79158375 - MER45C DNA AcHobo -628 953 773 2441 100 0 0 chr17 6280105 6280414 -79158066 - AluSc SINE Alu 0 309 1 2247 278 75 56 chr17 6280414 6281046 -79157434 - MER45C DNA AcHobo -808 773 115 2406 98 0 0 chr17 6281046 6281351 -79157129 + AluSx SINE Alu 1 305 -7 2247 278 75 56 chr17 6281351 6281429 -79157051 - MER45C DNA AcHobo -1466 115 40 271 167 114 68 chr17 6281692 6281824 -79156656 + (CTGGGG)n Simple_repeat Simple_repeat 4 141 0 2016 108 0 0 chr17 6282122 6282373 -79156107 - AluSq SINE Alu -62 251 1 1315 73 6 0 chr17 6282386 6282550 -79155930 - AluY SINE Alu -14 297 133 2855 32 0 0 chr17 6282550 6282865 -79155615 - AluYb8 SINE Alu -3 315 1 637 287 78 41 chr17 6283163 6283407 -79155073 - L1M4 LINE L1 -2868 3278 3026 305 197 14 0 chr17 6283529 6283600 -79154880 + MER69A DNA AcHobo 106 177 0 339 275 90 85 chr17 6283731 6283920 -79154560 - L1M4 LINE L1 -3309 2837 2648 1876 179 3 3 chr17 6284061 6284369 -79154111 + AluJo SINE Alu 1 308 -4 366 354 65 10 chr17 6284709 6285017 -79153463 - HAL1 LINE L1 -741 1766 1442 961 131 0 14 chr17 6285028 6285173 -79153307 - FLAM_C SINE Alu 0 143 1 2544 65 0 3 chr17 6285329 6285639 -79152841 - AluY SINE Alu -2 309 1 1169 170 43 0 chr17 6285834 6286022 -79152458 - AluJo SINE Alu -116 196 1 183 42 0 0 chr17 6286026 6286050 -79152430 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6519 181 52 17 chr17 6286369 6286492 -79151988 - L1MB7 LINE L1 -20 6164 6047 2374 104 0 13 chr17 6286492 6286808 -79151672 - AluSx SINE Alu 0 312 1 6519 181 52 17 chr17 6286808 6288973 -79149507 - L1MB7 LINE L1 -137 6047 3793 840 172 38 59 chr17 6289268 6289454 -79149026 + MER5A DNA MER1_type 7 188 -1 1516 107 158 12 chr17 6289967 6290220 -79148260 - AluSg SINE Alu -10 290 1 734 213 100 0 chr17 6290270 6290430 -79148050 + MER45A DNA AcHobo 3 178 0 196 321 12 37 chr17 6291282 6291363 -79147117 - L2 LINE L2 0 3272 3194 311 296 11 0 chr17 6291747 6291835 -79146645 + L1M4 LINE L1 3793 3881 -2265 2581 157 8 26 chr17 6292399 6292844 -79145636 + L1MB3 LINE L1 5695 6132 -51 2389 98 0 0 chr17 6292844 6293140 -79145340 + AluSx SINE Alu 1 296 -16 2581 157 8 26 chr17 6293140 6293190 -79145290 + L1MB3 LINE L1 6132 6181 -2 266 209 22 33 chr17 6293196 6293287 -79145193 + (TAA)n Simple_repeat Simple_repeat 3 92 0 24 0 0 0 chr17 6293327 6293351 -79145129 + AT_rich Low_complexity Low_complexity 1 24 0 232 329 76 55 chr17 6293603 6293986 -79144494 + L1MEd LINE L1 330 720 -5399 252 0 0 0 chr17 6294001 6294029 -79144451 + (CA)n Simple_repeat Simple_repeat 1 28 0 288 303 52 32 chr17 6294141 6294296 -79144184 - L2 LINE L2 -932 2382 2225 192 364 65 48 chr17 6294459 6294690 -79143790 + L2 LINE L2 3035 3269 -3 488 276 98 6 chr17 6294974 6295137 -79143343 - MIR SINE MIR -52 210 33 328 325 53 8 chr17 6295649 6295792 -79142688 + MIR SINE MIR 28 145 -63 202 220 40 90 chr17 6296122 6296222 -79142258 + MIR SINE MIR 45 139 -69 402 257 140 0 chr17 6297506 6297642 -79140838 + MIR SINE MIR 65 219 -43 709 236 85 19 chr17 6298697 6298909 -79139571 - MIR SINE MIR -9 253 28 411 309 157 5 chr17 6299276 6299486 -79138994 + MIR SINE MIR 2 243 -19 353 298 6 0 chr17 6300477 6300638 -79137842 + (TG)n Simple_repeat Simple_repeat 1 162 0 256 253 0 53 chr17 6300639 6300734 -79137746 + CT-rich Low_complexity Low_complexity 4 93 0 231 36 0 0 chr17 6300841 6300869 -79137611 + (CA)n Simple_repeat Simple_repeat 2 29 0 2100 112 3 3 chr17 6301351 6301646 -79136834 + AluSg SINE Alu 1 295 -15 342 266 52 32 chr17 6302076 6302225 -79136255 - MIR3 SINE MIR -52 156 33 210 298 181 0 chr17 6302967 6303061 -79135419 - MIR3 SINE MIR -52 156 46 463 252 54 77 chr17 6303797 6303863 -79134617 + L2 LINE L2 2848 2914 -399 2148 111 0 10 chr17 6303863 6304161 -79134319 + AluSq SINE Alu 5 299 -14 463 252 54 77 chr17 6304161 6304316 -79134164 + L2 LINE L2 2914 3064 -249 2530 239 61 28 chr17 6304366 6304607 -79133873 - L1ME1 LINE L1 -6 6160 5920 400 313 79 68 chr17 6304607 6305001 -79133479 - L1PB3 LINE L1 -229 5925 5537 2096 117 3 0 chr17 6305001 6305300 -79133180 - AluSp SINE Alu -13 300 1 400 313 79 68 chr17 6305300 6305488 -79132992 - L1PB3 LINE L1 -617 5537 5333 1973 124 24 7 chr17 6305488 6305786 -79132694 - AluSg SINE Alu -7 303 1 400 313 79 68 chr17 6305786 6305838 -79132642 - L1PB3 LINE L1 -821 5333 5283 283 295 54 54 chr17 6305847 6305976 -79132504 + L2 LINE L2 3185 3313 0 327 285 117 36 chr17 6305980 6306117 -79132363 + MIR3 SINE MIR 49 196 -12 256 281 27 96 chr17 6306568 6306714 -79131766 + MIR3 SINE MIR 19 154 -54 189 0 0 0 chr17 6307345 6307366 -79131114 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 1071 75 0 0 chr17 6307675 6307808 -79130672 + AluSq/x SINE Alu 1 133 -180 2110 135 0 19 chr17 6307814 6308132 -79130348 + AluSx SINE Alu 1 312 0 352 247 21 11 chr17 6308672 6308765 -79129715 - MIR SINE MIR -74 134 41 1897 65 47 127 chr17 6309285 6309624 -79128856 - AluSx SINE Alu 0 312 1 389 333 21 14 chr17 6309698 6309839 -79128641 + L2 LINE L2 3116 3257 -15 399 255 131 38 chr17 6310412 6310679 -79127801 - MLT1I LTR MaLR -1 408 117 207 286 29 14 chr17 6310743 6310813 -79127667 + MIR3 SINE MIR 118 188 -20 853 191 105 49 chr17 6311382 6311706 -79126774 + L1M4 LINE L1 4125 4466 -1680 207 300 55 9 chr17 6312117 6312227 -79126253 + L3 LINE CR1 1304 1418 -159 223 328 50 42 chr17 6312255 6312374 -79126106 - L2 LINE L2 -43 3229 3110 2380 84 0 0 chr17 6312699 6312997 -79125483 - AluSq SINE Alu -15 298 1 294 29 0 0 chr17 6313325 6313360 -79125120 + (TG)n Simple_repeat Simple_repeat 1 35 0 330 278 68 25 chr17 6313410 6313572 -79124908 - L2 LINE L2 -338 2975 2807 227 359 0 0 chr17 6313563 6313627 -79124853 + L3 LINE CR1 1505 1568 -9 * 339 338 26 7 chr17 6313899 6314050 -79124430 - MIR SINE MIR -3 259 106 510 294 114 5 chr17 6314536 6314747 -79123733 + MIR SINE MIR 3 236 -26 924 127 0 22 chr17 6314930 6315064 -79123416 - FLAM_C SINE Alu 0 133 3 201 121 0 0 chr17 6315389 6315422 -79123058 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1754 165 0 28 chr17 6316283 6316604 -79121876 + AluJo SINE Alu 1 312 0 270 0 0 0 chr17 6316666 6316696 -79121784 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 309 89 0 0 chr17 6316695 6316740 -79121740 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 89 0 0 chr17 6316888 6316933 -79121547 + (CA)n Simple_repeat Simple_repeat 1 45 0 626 280 60 10 chr17 6317112 6317312 -79121168 + MIR SINE MIR 39 248 -14 433 326 72 54 chr17 6317567 6317972 -79120508 + L2 LINE L2 2834 3245 -27 2151 98 0 7 chr17 6318771 6319066 -79119414 + AluSx SINE Alu 9 301 -11 248 329 0 15 chr17 6319123 6319236 -79119244 - MIR SINE MIR -68 140 76 258 32 0 0 chr17 6319761 6319792 -79118688 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 2148 70 29 0 chr17 6319794 6320067 -79118413 - AluSp SINE Alu -32 281 1 353 181 134 79 chr17 6322080 6322207 -79116273 - MIR3 SINE MIR -17 191 58 424 279 16 16 chr17 6322264 6322393 -79116087 + MIR SINE MIR 49 177 -85 2358 66 0 16 chr17 6323115 6323418 -79115062 + AluY SINE Alu 1 298 -13 728 202 0 16 chr17 6323634 6323763 -79114717 + FLAM_C SINE Alu 3 129 -4 27 0 0 0 chr17 6323764 6323791 -79114689 + AT_rich Low_complexity Low_complexity 1 27 0 225 304 44 22 chr17 6323986 6324121 -79114359 + MIR3 SINE MIR 61 198 -10 2383 82 0 13 chr17 6324793 6325108 -79113372 - AluY SINE Alu 0 311 1 266 204 19 0 chr17 6325527 6325581 -79112899 + MER91B DNA MER1_type 8 62 -128 284 305 42 0 chr17 6325883 6325978 -79112502 + MIR3 SINE MIR 110 208 0 2113 132 3 3 chr17 6326075 6326386 -79112094 + AluSx SINE Alu 1 311 -1 298 321 107 15 chr17 6326729 6326950 -79111530 + MIR SINE MIR 1 252 -10 183 42 0 0 chr17 6327008 6327032 -79111448 + (CA)n Simple_repeat Simple_repeat 1 24 0 263 200 14 71 chr17 6327688 6327758 -79110722 + L2 LINE L2 3206 3271 -1 23 54 0 0 chr17 6328383 6328420 -79110060 + GC_rich Low_complexity Low_complexity 1 37 0 180 125 36 18 chr17 6328549 6328605 -79109875 + (CCG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr17 6328624 6328678 -79109802 + GC_rich Low_complexity Low_complexity 1 54 0 226 217 33 22 chr17 6328697 6328789 -79109691 + (CCCCG)n Simple_repeat Simple_repeat 4 96 0 476 275 26 96 chr17 6329695 6329924 -79108556 - L3 LINE CR1 -72 1505 1293 218 180 16 0 chr17 6330624 6330685 -79107795 + (TG)n Simple_repeat Simple_repeat 1 62 0 501 353 101 37 chr17 6331604 6332117 -79106363 + L3 LINE CR1 272 817 -760 1058 110 6 0 chr17 6332543 6332716 -79105764 + (TCC)n Simple_repeat Simple_repeat 2 175 0 937 140 17 3 chr17 6332749 6333103 -79105377 + CT-rich Low_complexity Low_complexity 1 359 0 2062 107 43 0 chr17 6333674 6333973 -79104507 - AluSx SINE Alu 0 312 1 449 366 33 15 chr17 6334080 6334416 -79104064 - L1MC4a LINE L1 -1911 5897 5556 1974 114 9 52 chr17 6334503 6334828 -79103652 + AluSq SINE Alu 1 311 -2 2162 94 44 0 chr17 6334976 6335273 -79103207 + AluSx SINE Alu 1 310 -2 2302 85 3 0 chr17 6335626 6335933 -79102547 + AluSg SINE Alu 1 308 -2 187 349 92 0 chr17 6336000 6336109 -79102371 - L3b LINE CR1 -123 1460 1342 2474 67 0 3 chr17 6336140 6336452 -79102028 + AluY SINE Alu 1 311 0 764 244 15 79 chr17 6336474 6336740 -79101740 - MIR SINE MIR 0 262 14 198 344 76 30 chr17 6336803 6336934 -79101546 + MIR3 SINE MIR 65 201 -7 265 324 57 45 chr17 6337733 6337909 -79100571 - MIR3 SINE MIR -29 179 2 1998 138 13 0 chr17 6338219 6338341 -79100139 + AluSx SINE Alu 1 120 -192 189 0 0 0 chr17 6338341 6338362 -79100118 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1998 138 13 0 chr17 6338362 6338537 -79099943 + AluSx SINE Alu 120 302 -10 355 282 120 9 chr17 6339487 6339621 -79098859 + MIR SINE MIR 19 164 -60 2409 71 0 0 chr17 6339697 6340007 -79098473 - AluSg SINE Alu 0 310 1 2406 96 0 0 chr17 6341525 6341837 -79096643 - AluSx SINE Alu 0 312 1 965 279 56 37 chr17 6341926 6342303 -79096177 + MLT1K LTR MaLR 1 384 -204 269 310 95 0 chr17 6342695 6342811 -79095669 + MIR SINE MIR 92 218 -44 1127 96 30 0 chr17 6342977 6343170 -79095310 + AluSg/x SINE Alu 140 337 0 205 320 0 39 chr17 6343182 6343260 -79095220 + L2 LINE L2 3188 3262 -10 498 328 33 6 chr17 6343350 6343533 -79094947 + MIR SINE MIR 1 188 -74 559 243 40 20 chr17 6343820 6343968 -79094512 - MIR SINE MIR -2 260 110 212 220 9 119 chr17 6346602 6346711 -79091769 - L2 LINE L2 -1 3312 3216 677 239 55 0 chr17 6347306 6347469 -79091011 + MIR SINE MIR 91 262 0 2244 97 0 13 chr17 6349194 6349502 -79088978 + AluSx SINE Alu 1 304 -8 2553 50 0 7 chr17 6349656 6349955 -79088525 - AluY SINE Alu -14 297 1 288 0 0 0 chr17 6350239 6350271 -79088209 + (CA)n Simple_repeat Simple_repeat 2 33 0 5000 182 175 41 chr17 6350314 6351871 -79086609 - L1MC4 LINE L1 -216 7826 6032 1059 283 153 38 chr17 6351873 6353168 -79085312 - L1MEc LINE L1 -4074 2236 793 269 310 0 0 chr17 6353272 6353343 -79085137 - L1MEc LINE L1 -5488 631 561 2266 237 88 94 chr17 6353764 6354188 -79084292 - HAL1 LINE L1 -461 2046 1621 1529 153 42 0 chr17 6354188 6354429 -79084051 - AluJo SINE Alu -59 253 3 2266 237 88 94 chr17 6354429 6355242 -79083238 - HAL1 LINE L1 -886 1621 817 606 272 97 53 chr17 6355240 6355279 -79083201 - HAL1 LINE L1 -2150 357 321 * 2448 150 67 12 chr17 6355279 6355685 -79082795 + MSTA LTR MaLR 1 428 0 606 272 97 53 chr17 6355685 6355987 -79082493 - HAL1 LINE L1 -2186 321 1 2128 118 10 0 chr17 6356303 6356613 -79081867 + AluSx SINE Alu 12 312 0 679 316 51 40 chr17 6357079 6357548 -79080932 + HAL1 LINE L1 1 474 -2033 1031 267 119 38 chr17 6357549 6358070 -79080410 + HAL1 LINE L1 1585 2147 -360 1929 176 38 27 chr17 6358431 6358800 -79079680 + MLT1A2 LTR MaLR 1 373 -1 881 0 0 52 chr17 6360313 6360449 -79078031 + (GAA)n Simple_repeat Simple_repeat 1 129 0 194 315 61 88 chr17 6361186 6361516 -79076964 - L2 LINE L2 -26 3246 2926 906 253 36 44 chr17 6361897 6362261 -79076219 + L1ME2 LINE L1 4886 5246 -900 541 143 151 0 chr17 6362300 6362426 -79076054 + L1MB7 LINE L1 6040 6184 0 604 220 60 0 chr17 6362442 6362592 -79075888 + L1ME2 LINE L1 5232 5390 -756 349 227 77 56 chr17 6362593 6362945 -79075535 + AluSx SINE Alu 1 182 -120 1762 160 14 3 chr17 6362945 6363239 -79075241 + AluSx SINE Alu 1 297 -15 615 250 152 23 chr17 6363256 6363512 -79074968 + L1ME2 LINE L1 5440 5728 -2267 710 198 62 51 chr17 6363513 6363690 -79074790 + MLT1D LTR MaLR 305 483 -22 1041 190 144 9 chr17 6363743 6364035 -79074445 + L1ME2 LINE L1 5835 6164 0 344 266 53 39 chr17 6364073 6364280 -79074200 + L1MC4 LINE L1 7832 8041 -1 451 176 7 3 chr17 6364597 6364754 -79073726 + MER3 DNA MER1_type 1 203 -6 466 233 30 30 chr17 6364920 6365053 -79073427 + MIR3 SINE MIR 30 162 -46 243 266 76 38 chr17 6365327 6365406 -79073074 - MIR SINE MIR -147 115 34 223 170 0 21 chr17 6365688 6365735 -79072745 + (GGGTG)n Simple_repeat Simple_repeat 4 49 0 548 286 66 31 chr17 6366341 6366537 -79071943 + MIR SINE MIR 48 250 -12 263 256 0 12 chr17 6366571 6366657 -79071823 + L1P5 LINE L1 5346 5430 -721 289 286 29 0 chr17 6366754 6366859 -79071621 + L1MC4a LINE L1 5796 5903 -1905 368 273 11 0 chr17 6368886 6368974 -79069506 + MIR3 SINE MIR 79 167 -41 452 211 32 0 chr17 6369953 6370048 -79068432 - MER5A DNA MER1_type -80 109 12 421 220 214 29 chr17 6370125 6370298 -79068182 + HAL1 LINE L1 7 211 -2296 763 44 0 0 chr17 6370300 6370390 -79068090 - 5S rRNA rRNA -31 90 1 1214 268 82 31 chr17 6370390 6370901 -79067579 + HAL1 LINE L1 202 738 -1769 3306 216 65 22 chr17 6370908 6372142 -79066338 + L1ME2 LINE L1 4902 6333 -1 306 290 21 11 chr17 6372156 6372249 -79066231 + HAL1 LINE L1 776 869 -1638 1025 229 64 74 chr17 6372289 6372788 -79065692 + HAL1 LINE L1 971 1464 -1043 1961 199 43 21 chr17 6372832 6373250 -79065230 + L1MDa LINE L1 17 443 -6097 1366 165 30 33 chr17 6373280 6373583 -79064897 + L1MD1 LINE L1 5446 5747 -495 1087 121 0 0 chr17 6373583 6373724 -79064756 - AluJb SINE Alu -15 297 157 1971 172 135 31 chr17 6373726 6374179 -79064301 + L1MD1 LINE L1 5742 6241 -1 549 128 35 106 chr17 6374174 6374315 -79064165 + HAL1 LINE L1 1566 1696 -811 * 785 114 16 32 chr17 6374324 6374447 -79064033 + FLAM_C SINE Alu 19 139 -4 232 317 24 0 chr17 6374452 6374534 -79063946 + HAL1 LINE L1 1692 1775 -732 254 300 8 42 chr17 6375027 6375147 -79063333 + L1ME2 LINE L1 5966 6081 -83 326 376 143 8 chr17 6375257 6375515 -79062965 + L3 LINE CR1 1284 1576 -1 247 330 112 86 chr17 6377142 6377375 -79061105 + L2 LINE L2 2945 3183 -89 197 292 233 8 chr17 6378343 6378463 -79060017 + MIR3 SINE MIR 16 162 -46 372 233 68 53 chr17 6378923 6379056 -79059424 - L2 LINE L2 0 3313 3179 28 29 0 0 chr17 6379742 6379777 -79058703 + AT_rich Low_complexity Low_complexity 1 35 0 1708 134 4 8 chr17 6379845 6380099 -79058381 - AluJo SINE Alu 0 312 60 1907 146 31 0 chr17 6380642 6380929 -79057551 - AluJo SINE Alu -15 297 2 25 51 0 0 chr17 6381085 6381124 -79057356 + AT_rich Low_complexity Low_complexity 1 39 0 184 297 94 16 chr17 6381143 6381207 -79057273 + MIR SINE MIR 25 93 -169 277 345 75 51 chr17 6381662 6381924 -79056556 + L2 LINE L2 2444 2698 -616 2160 118 0 0 chr17 6381924 6382212 -79056268 + AluSq SINE Alu 1 288 -25 189 94 0 0 chr17 6382218 6382250 -79056230 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 277 345 75 51 chr17 6382250 6382313 -79056167 + L2 LINE L2 2702 2784 -530 997 285 142 34 chr17 6382313 6383900 -79054580 + L1ME3A LINE L1 4162 5929 -233 544 156 0 11 chr17 6384050 6384140 -79054340 + Tigger7 DNA MER2_type 22 110 -2377 2364 91 0 0 chr17 6384140 6384437 -79054043 - AluSx SINE Alu -15 297 1 1044 96 0 7 chr17 6384437 6384573 -79053907 - AluSq/x SINE Alu -177 135 1 1214 188 14 5 chr17 6384588 6384811 -79053669 + Tigger7 DNA MER2_type 201 425 -2062 1342 83 0 0 chr17 6384811 6384980 -79053500 + AluY SINE Alu 140 308 -3 330 248 102 80 chr17 6385839 6385881 -79052599 - MIR3 SINE MIR -52 156 116 2171 120 0 3 chr17 6385881 6386180 -79052300 + AluSx SINE Alu 1 298 -14 330 248 102 80 chr17 6386180 6386274 -79052206 - MIR3 SINE MIR -92 116 17 214 345 126 8 chr17 6386547 6386666 -79051814 - L2 LINE L2 -6 3266 3134 388 242 11 22 chr17 6386779 6386870 -79051610 + MER21B LTR ERV1 1 90 -773 3585 188 98 29 chr17 6386892 6387159 -79051321 + MER21B LTR ERV1 19 266 -597 2377 94 3 0 chr17 6387159 6387467 -79051013 + AluSp SINE Alu 1 309 -4 3585 188 98 29 chr17 6387467 6387988 -79050492 + MER21B LTR ERV1 266 861 -2 2281 111 0 3 chr17 6388285 6388583 -79049897 + AluSx SINE Alu 1 297 -15 2242 55 0 4 chr17 6388752 6389023 -79049457 - AluSg SINE Alu -40 270 1 2278 92 0 0 chr17 6389747 6390062 -79048418 + AluSx SINE Alu 1 315 0 2072 111 48 3 chr17 6390499 6390788 -79047692 + AluSx SINE Alu 1 302 -10 883 143 12 20 chr17 6390822 6391066 -79047414 + GA-rich Low_complexity Low_complexity 1 242 0 442 261 85 20 chr17 6391188 6391341 -79047139 + L1ME3A LINE L1 5989 6151 -19 1787 170 0 0 chr17 6391341 6391630 -79046850 - AluJo SINE Alu -19 293 5 342 185 46 0 chr17 6391758 6391823 -79046657 - HsTC2 DNA Tc2 -3 1895 1828 533 335 62 21 chr17 6391961 6392298 -79046182 + L1MC/D LINE L1 5292 5642 -2166 216 97 0 0 chr17 6392325 6392356 -79046124 + (TA)n Simple_repeat Simple_repeat 1 31 0 507 312 55 18 chr17 6395701 6395919 -79042561 - L2 LINE L2 -427 2887 2662 321 26 0 0 chr17 6396444 6396482 -79041998 + (CA)n Simple_repeat Simple_repeat 1 38 0 220 224 68 60 chr17 6396962 6397109 -79041371 - L3 LINE CR1 -16 1561 1338 2272 119 7 0 chr17 6397292 6397595 -79040885 + AluSx SINE Alu 1 305 -7 1705 149 91 0 chr17 6397632 6397908 -79040572 - AluSx SINE Alu -11 301 1 320 273 73 9 chr17 6398531 6398641 -79039839 + MER5C DNA MER1_type 5 121 -203 355 181 19 67 chr17 6398653 6398758 -79039722 + MER5C DNA MER1_type 225 324 0 255 345 6 6 chr17 6401330 6401504 -79036976 - L1ME LINE L1 -364 5757 5584 1494 156 0 13 chr17 6401803 6402055 -79036425 + AluSx SINE Alu 61 309 0 1059 211 97 20 chr17 6402067 6402365 -79036115 + L1MC4 LINE L1 5296 5616 -2192 342 186 72 10 chr17 6402370 6402467 -79036013 - MER50 LTR ERV1 -150 584 482 5326 201 71 76 chr17 6402467 6403792 -79034688 + L1MC4 LINE L1 5620 6951 -1044 225 0 0 0 chr17 6403792 6403817 -79034663 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1899 102 0 67 chr17 6403825 6404108 -79034372 - AluSx SINE Alu -48 264 1 5326 201 71 76 chr17 6404108 6405230 -79033250 + L1MC4 LINE L1 6958 7993 -2 2974 206 36 16 chr17 6405241 6405935 -79032545 + L1ME2 LINE L1 5431 6138 -26 2476 90 0 3 chr17 6405999 6406310 -79032170 - AluSx SINE Alu -2 310 1 622 321 62 35 chr17 6406555 6406895 -79031585 + L1MC4 LINE L1 7694 8042 0 201 74 0 0 chr17 6408406 6408433 -79030047 + (CA)n Simple_repeat Simple_repeat 2 28 0 440 258 101 22 chr17 6415524 6415703 -79022777 + MIR SINE MIR 49 256 -6 260 300 13 24 chr17 6416745 6416839 -79021641 - MIR SINE MIR -67 141 48 3001 220 131 12 chr17 6417007 6417968 -79020512 + L1MC4 LINE L1 6393 7467 -575 779 246 135 3 chr17 6417955 6418244 -79020236 + L1MD3 LINE L1 7657 7983 -12 * 4046 175 47 56 chr17 6418289 6419267 -79019213 + LTR5 LTR ERVK 1 969 0 271 233 0 0 chr17 6419271 6419331 -79019149 - MER113 DNA MER1_type? -458 63 4 443 262 248 0 chr17 6419342 6419483 -79018997 - MER5A DNA MER1_type 0 189 14 333 270 0 0 chr17 6419665 6419739 -79018741 + MIR SINE MIR 68 141 -121 581 267 154 60 chr17 6419816 6420296 -79018184 + L3 LINE CR1 726 1250 -327 545 272 28 11 chr17 6420356 6420536 -79017944 - Charlie8 DNA MER1_type -2187 230 48 529 267 191 11 chr17 6420571 6420844 -79017636 + L3 LINE CR1 1254 1575 -2 204 67 0 0 chr17 6421113 6421143 -79017337 + (T)n Simple_repeat Simple_repeat 1 30 0 295 234 0 0 chr17 6421250 6421314 -79017166 + MIR SINE MIR 185 248 -14 793 273 42 87 chr17 6421459 6421814 -79016666 - L2 LINE L2 -446 2868 2530 1969 51 0 8 chr17 6422810 6423047 -79015433 + AluY SINE Alu 67 301 -10 1079 267 89 23 chr17 6424841 6424875 -79013605 - L2 LINE L2 -17 3296 3266 2296 115 46 0 chr17 6424875 6425224 -79013256 - MER47A DNA MER2_type -1 365 1 1079 267 89 23 chr17 6425224 6425791 -79012689 - L2 LINE L2 -47 3266 2670 988 149 12 133 chr17 6425797 6426046 -79012434 + MER20 DNA MER1_type 1 219 0 205 103 0 0 chr17 6427407 6427436 -79011044 + MIR SINE MIR 224 252 -10 203 354 0 0 chr17 6427856 6427938 -79010542 + C-rich Low_complexity Low_complexity 6 87 0 209 103 0 0 chr17 6428228 6428257 -79010223 + MIR SINE MIR 224 252 -10 2367 100 0 0 chr17 6430098 6430389 -79008091 + AluSc SINE Alu 2 292 -17 430 284 2 24 chr17 6431161 6431313 -79007167 + MIR SINE MIR 16 160 -48 1824 146 3 48 chr17 6431326 6431635 -79006845 + AluJb SINE Alu 1 295 -17 446 0 19 0 chr17 6431701 6431755 -79006725 + (TC)n Simple_repeat Simple_repeat 2 56 0 205 214 233 10 chr17 6431926 6432029 -79006451 - MIR3 SINE MIR -75 133 8 205 284 0 15 chr17 6432951 6433018 -79005462 + G-rich Low_complexity Low_complexity 2 67 0 744 280 19 25 chr17 6433344 6433652 -79004828 - L1MEc LINE L1 -5966 430 44 980 149 14 0 chr17 6433907 6434114 -79004366 - AluSx SINE Alu 0 349 141 652 99 0 0 chr17 6434114 6434195 -79004285 - AluSx SINE Alu -231 82 2 455 178 140 46 chr17 6434342 6434598 -79003882 + LTR50 LTR ERVL 216 586 -209 280 244 99 45 chr17 6434614 6434815 -79003665 - L1M4 LINE L1 -747 5399 5188 421 187 75 0 chr17 6434948 6435055 -79003425 - MER112 DNA MER1_type -6 254 140 185 105 0 53 chr17 6435089 6435127 -79003353 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1945 91 76 0 chr17 6435141 6435433 -79003047 - AluSx SINE Alu 0 312 1 242 239 76 65 chr17 6436190 6436282 -79002198 - MIR3 SINE MIR -35 173 81 2406 94 0 0 chr17 6436407 6436705 -79001775 + AluSc SINE Alu 1 298 -11 2209 173 66 12 chr17 6436915 6437325 -79001155 + MSTB1 LTR MaLR 1 432 0 2157 118 0 37 chr17 6437553 6437874 -79000606 - AluSx SINE Alu -3 309 1 281 100 0 0 chr17 6437874 6437914 -79000566 - Alu SINE Alu -259 41 2 250 188 318 0 chr17 6437915 6438000 -79000480 - MER112 DNA MER1_type -141 119 8 1811 121 38 11 chr17 6438384 6438648 -78999832 - AluSx SINE Alu -41 271 1 680 245 159 14 chr17 6438674 6438882 -78999598 - MIR SINE MIR -10 252 15 248 254 208 25 chr17 6438953 6439150 -78999330 + L3 LINE CR1 1146 1378 -199 2334 98 0 0 chr17 6439181 6439476 -78999004 + AluSg SINE Alu 1 295 -15 2168 127 3 3 chr17 6440355 6440662 -78997818 - AluSg SINE Alu -3 307 1 553 258 108 27 chr17 6440667 6440853 -78997627 + L2 LINE L2 3113 3313 0 191 302 18 113 chr17 6440956 6441178 -78997302 + L2 LINE L2 2976 3176 -96 184 250 29 114 chr17 6441474 6441614 -78996866 - L2 LINE L2 -5 3267 3140 2384 97 13 0 chr17 6442195 6442494 -78995986 - AluSx SINE Alu -9 303 1 707 316 22 26 chr17 6442582 6442895 -78995585 - L1ME LINE L1 -426 5695 5384 186 194 14 97 chr17 6443923 6443978 -78994502 - MIR3 SINE MIR -6 202 153 2491 79 0 3 chr17 6443978 6444283 -78994197 - AluSg SINE Alu -6 304 1 186 194 14 97 chr17 6444283 6444299 -78994181 - MIR3 SINE MIR -55 153 137 245 234 65 19 chr17 6444329 6444436 -78994044 - L1ME4a LINE L1 -11 6110 5999 467 293 115 5 chr17 6444490 6444681 -78993799 - L1ME4a LINE L1 -218 5903 5692 2078 120 0 17 chr17 6444682 6444981 -78993499 + AluSx SINE Alu 1 294 -18 1018 125 0 80 chr17 6444983 6445159 -78993321 + AluSg/x SINE Alu 136 297 -13 318 266 126 14 chr17 6445159 6445302 -78993178 - L1ME4a LINE L1 -412 5709 5551 294 278 106 100 chr17 6445461 6445554 -78992926 - MIR SINE MIR -62 200 104 2419 74 0 35 chr17 6445554 6445865 -78992615 + AluSq SINE Alu 1 300 -13 294 278 106 100 chr17 6445865 6445951 -78992529 - MIR SINE MIR -158 104 20 302 259 82 83 chr17 6447231 6447428 -78991052 - MIR SINE MIR -37 225 35 183 284 198 0 chr17 6447784 6447865 -78990615 + L2 LINE L2 3162 3258 -14 183 294 103 0 chr17 6447975 6448043 -78990437 + L2 LINE L2 3149 3223 -49 216 97 0 0 chr17 6448098 6448129 -78990351 + (CA)n Simple_repeat Simple_repeat 1 31 0 494 262 70 60 chr17 6450499 6450791 -78987689 - L2 LINE L2 -69 3244 2947 1051 207 4 40 chr17 6450791 6451018 -78987462 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr17 6451075 6451095 -78987385 + (T)n Simple_repeat Simple_repeat 1 20 0 656 172 37 15 chr17 6451294 6451428 -78987052 + AluSg/x SINE Alu 135 271 -39 335 291 99 0 chr17 6451450 6451591 -78986889 + L1MC/D LINE L1 5655 5809 -1999 2396 47 0 7 chr17 6451593 6451871 -78986609 + AluY SINE Alu 17 292 -19 1598 216 100 10 chr17 6451899 6452381 -78986099 + L1ME2 LINE L1 5633 6157 -7 2005 65 4 0 chr17 6452402 6452649 -78985831 - AluY SINE Alu -63 248 1 2035 115 21 7 chr17 6453490 6453777 -78984703 - AluSg1 SINE Alu -18 291 1 259 183 133 0 chr17 6454484 6454544 -78983936 - MIR3 SINE MIR -29 179 112 810 282 103 46 chr17 6454771 6455335 -78983145 + MLT1L LTR MaLR 6 601 -14 223 337 32 11 chr17 6455356 6455451 -78983029 - MIR3 SINE MIR -102 106 10 441 315 22 28 chr17 6456312 6456490 -78981990 + MIR SINE MIR 20 196 -66 279 333 79 9 chr17 6458659 6458773 -78979707 - L3 LINE CR1 -1271 306 185 297 254 0 0 chr17 6459792 6459851 -78978629 - L2 LINE L2 -4 3309 3251 267 208 0 0 chr17 6460058 6460111 -78978369 + L2 LINE L2 3261 3313 0 420 245 7 0 chr17 6460171 6460311 -78978169 + L1ME4a LINE L1 5685 5828 -293 2435 76 0 3 chr17 6460392 6460683 -78977797 + AluSq SINE Alu 1 290 -23 686 269 108 11 chr17 6460824 6461110 -78977370 - L1ME4a LINE L1 -248 5873 5560 306 0 0 0 chr17 6461967 6462001 -78976479 + (A)n Simple_repeat Simple_repeat 1 34 0 442 336 36 38 chr17 6462868 6463285 -78975195 + L2 LINE L2 2097 2512 -802 373 310 66 10 chr17 6463377 6463574 -78974906 - L2 LINE L2 -1103 2211 2004 269 349 38 9 chr17 6463900 6464006 -78974474 + L2 LINE L2 3133 3241 -31 1368 105 4 0 chr17 6464011 6464261 -78974219 + (TGGA)n Simple_repeat Simple_repeat 1 251 0 226 296 102 11 chr17 6464261 6464349 -78974131 - L2 LINE L2 0 3313 3218 226 370 73 12 chr17 6464723 6464888 -78973592 - L2 LINE L2 0 3272 3098 468 0 0 0 chr17 6465084 6465136 -78973344 + (CA)n Simple_repeat Simple_repeat 2 53 0 629 313 103 17 chr17 6465165 6465698 -78972782 + L1ME4a LINE L1 5405 5983 -138 2271 92 24 3 chr17 6466242 6466534 -78971946 + AluSg SINE Alu 1 298 -12 2305 103 0 3 chr17 6467296 6467596 -78970884 - AluSx SINE Alu -13 299 1 830 292 4 26 chr17 6470487 6470661 -78967819 + MIR SINE MIR 35 204 -58 2117 122 0 25 chr17 6470661 6471027 -78967453 + AluSx SINE Alu 1 312 0 830 292 4 26 chr17 6471027 6471085 -78967395 + MIR SINE MIR 204 262 0 209 222 0 0 chr17 6471316 6471361 -78967119 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2384 94 0 0 chr17 6471379 6471676 -78966804 - AluSx SINE Alu -15 297 1 1138 82 0 0 chr17 6471676 6471811 -78966669 - AluSq/x SINE Alu -178 135 1 231 224 167 32 chr17 6472642 6472798 -78965682 - L2 LINE L2 -238 3034 2858 2249 104 3 0 chr17 6473335 6473634 -78964846 + AluSg SINE Alu 1 300 -10 237 180 0 0 chr17 6476122 6476172 -78962308 + CT-rich Low_complexity Low_complexity 2 51 0 293 270 73 73 chr17 6476607 6476907 -78961573 + L2 LINE L2 2949 3248 -24 573 308 59 0 chr17 6477741 6477957 -78960523 + MIR SINE MIR 7 246 -16 204 214 0 0 chr17 6479259 6479301 -78959179 + CT-rich Low_complexity Low_complexity 1 42 0 383 185 50 8 chr17 6479385 6479504 -78958976 + GA-rich Low_complexity Low_complexity 3 126 0 21 0 0 0 chr17 6479525 6479546 -78958934 + AT_rich Low_complexity Low_complexity 1 21 0 957 155 0 0 chr17 6479573 6479816 -78958664 + L1PB3 LINE L1 5859 6151 -3 2166 112 17 0 chr17 6479877 6480173 -78958307 - AluSq SINE Alu -12 301 1 3036 173 17 6 chr17 6480335 6480877 -78957603 - MER6A DNA MER2_type 0 605 58 713 151 0 0 chr17 6480888 6481007 -78957473 - AluJb SINE Alu -4 308 190 370 152 0 80 chr17 6481008 6481083 -78957397 - MER6 DNA MER2_type -82 62 -1 2285 96 0 0 chr17 6481150 6481473 -78957007 - AluSc SINE Alu 0 323 1 781 201 69 0 chr17 6481723 6481897 -78956583 - MER20 DNA MER1_type 0 219 34 677 236 55 0 chr17 6482078 6482243 -78956237 + MER97b DNA MER1_type? 5 178 -875 225 0 0 0 chr17 6482668 6482693 -78955787 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr17 6482851 6482886 -78955594 + AT_rich Low_complexity Low_complexity 1 35 0 264 59 0 0 chr17 6483334 6483368 -78955112 + (CA)n Simple_repeat Simple_repeat 2 35 0 825 122 0 20 chr17 6483392 6483641 -78954839 + (TG)n Simple_repeat Simple_repeat 1 243 0 305 221 126 11 chr17 6483977 6484072 -78954408 - MIR SINE MIR -62 146 41 23 68 0 0 chr17 6485348 6485392 -78953088 + GC_rich Low_complexity Low_complexity 1 44 0 218 307 13 0 chr17 6486152 6486227 -78952253 - L2 LINE L2 -11 3261 3186 766 143 33 91 chr17 6486669 6486800 -78951680 - L1MA6 LINE L1 0 6300 6184 2409 97 0 6 chr17 6486800 6487111 -78951369 - AluSx SINE Alu -3 309 1 766 143 33 91 chr17 6487111 6487189 -78951291 - L1MA6 LINE L1 -116 6184 6103 4754 54 29 2 chr17 6487337 6487966 -78950514 - L1PA8 LINE L1 0 6172 5527 564 292 75 18 chr17 6488010 6488236 -78950244 + MIR SINE MIR 21 259 -3 621 78 0 49 chr17 6488327 6488429 -78950051 + AluY SINE Alu 208 304 -7 596 273 116 29 chr17 6488553 6488898 -78949582 + L1M4 LINE L1 4495 4869 -1277 1315 181 24 74 chr17 6488912 6489037 -78949443 + Charlie2a DNA MER1_type 1011 1141 -1721 2410 77 0 48 chr17 6489037 6489349 -78949131 - AluSg SINE Alu -13 297 1 1315 181 24 74 chr17 6489349 6489644 -78948836 + Charlie2a DNA MER1_type 1141 1410 -1452 1855 174 106 26 chr17 6489663 6490088 -78948392 + LTR2B LTR ERV1 32 490 0 249 200 67 13 chr17 6490418 6490493 -78947987 + L1MD3 LINE L1 7905 7983 -12 22 0 0 0 chr17 6490555 6490577 -78947903 + AT_rich Low_complexity Low_complexity 1 22 0 2266 110 10 0 chr17 6490577 6490887 -78947593 - AluSq SINE Alu 0 313 1 1058 149 199 10 chr17 6490938 6491139 -78947341 + AluJb SINE Alu 1 239 -73 358 328 64 17 chr17 6491604 6491816 -78946664 - MLT1H LTR MaLR -150 264 65 1086 250 37 10 chr17 6492003 6492299 -78946181 + Charlie2a DNA MER1_type 1475 1778 -1084 705 145 0 0 chr17 6492299 6492416 -78946064 + FRAM SINE Alu 52 168 -8 25 0 0 0 chr17 6492563 6492588 -78945892 + AT_rich Low_complexity Low_complexity 1 25 0 2276 99 0 0 chr17 6493147 6493439 -78945041 - AluSc SINE Alu -16 293 2 3347 241 102 35 chr17 6493627 6494388 -78944092 + L2 LINE L2 1631 2340 -973 2100 106 29 4 chr17 6494388 6494662 -78943818 + AluSx SINE Alu 1 281 -31 3347 241 102 35 chr17 6494662 6494986 -78943494 + L2 LINE L2 2340 2641 -672 2493 115 20 54 chr17 6494986 6495229 -78943251 - MSTA LTR MaLR 0 428 178 2271 117 0 7 chr17 6495229 6495537 -78942943 - AluSg SINE Alu -4 306 1 2493 115 20 54 chr17 6495537 6495549 -78942931 - MSTA LTR MaLR -250 178 167 2530 71 0 3 chr17 6495549 6495858 -78942622 - AluY SINE Alu -3 308 1 2493 115 20 54 chr17 6495858 6496044 -78942436 - MSTA LTR MaLR -261 167 1 3347 241 102 35 chr17 6496044 6496284 -78942196 + L2 LINE L2 2641 2864 -449 2372 94 3 3 chr17 6496284 6496582 -78941898 + AluSx SINE Alu 1 298 -14 6874 45 7 2 chr17 6496583 6497773 -78940707 + L1PA6 LINE L1 4960 6152 -2 3347 241 102 35 chr17 6497773 6498023 -78940457 + L2 LINE L2 2863 3312 -1 300 137 0 0 chr17 6499354 6499405 -78939075 + (TA)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr17 6499413 6499442 -78939038 + AT_rich Low_complexity Low_complexity 1 29 0 203 232 62 0 chr17 6499444 6499556 -78938924 + (TA)n Simple_repeat Simple_repeat 2 120 0 910 220 11 0 chr17 6499556 6499733 -78938747 - AluJo SINE Alu -17 295 117 925 113 7 7 chr17 6499764 6499906 -78938574 - L1MB8 LINE L1 -11 6167 6026 354 137 0 0 chr17 6499906 6499957 -78938523 + L1 LINE L1 17 67 -7498 18819 165 48 38 chr17 6500111 6502070 -78936410 + L1 LINE L1 16 1954 -5611 340 60 0 8 chr17 6502070 6502121 -78936359 + MER4E LTR ERV1 653 692 -74 18819 165 48 38 chr17 6502121 6504867 -78933613 + L1 LINE L1 1954 4821 -2744 14525 157 94 84 chr17 6504870 6508925 -78929555 - HERVH LTR ERV1 -3619 4094 1 1226 171 129 89 chr17 6508932 6509358 -78929122 - LTR7 LTR ERV1 -7 443 1 3012 211 8 3 chr17 6509358 6510016 -78928464 + L1 LINE L1 5755 6415 -1150 933 88 0 0 chr17 6510017 6510130 -78928350 + AluY SINE Alu 1 113 -198 1824 186 121 38 chr17 6510347 6510794 -78927686 - LTR2B LTR ERV1 0 490 7 3208 246 192 42 chr17 6510813 6512650 -78925830 - HAL1 LINE L1 -145 2362 252 1895 251 76 44 chr17 6512660 6512978 -78925502 + L2 LINE L2 2286 2592 -721 2016 73 4 0 chr17 6512978 6513238 -78925242 + L1PA8 LINE L1 5912 6172 0 1895 251 76 44 chr17 6513238 6513847 -78924633 + L2 LINE L2 2592 3254 -59 5731 137 9 17 chr17 6513849 6515195 -78923285 + L1MA3 LINE L1 4333 5668 -637 3749 204 53 4 chr17 6515198 6515894 -78922586 + L1PA12 LINE L1 1 730 -6851 * 5647 144 24 19 chr17 6515890 6516839 -78921641 + L1PA13 LINE L1 4379 5342 -821 2427 96 0 0 chr17 6516839 6517151 -78921329 - AluSx SINE Alu 0 312 1 5647 144 24 19 chr17 6517151 6517958 -78920522 + L1PA13 LINE L1 5342 6143 -20 4243 109 15 14 chr17 6517972 6518466 -78920014 + L1MA3 LINE L1 5652 6152 -153 2274 67 3 11 chr17 6518466 6518792 -78919688 + AluY SINE Alu 1 324 0 4243 109 15 14 chr17 6518792 6518947 -78919533 + L1MA3 LINE L1 6152 6305 0 1911 221 81 109 chr17 6518996 6519447 -78919033 + L1ME LINE L1 503 965 -5575 642 151 0 0 chr17 6519447 6519553 -78918927 + L1MA4 LINE L1 6180 6285 -15 1911 221 81 109 chr17 6519553 6519602 -78918878 + L1ME LINE L1 965 1014 -5526 2355 91 0 0 chr17 6519602 6519900 -78918580 - AluSg SINE Alu -12 298 1 1911 221 81 109 chr17 6519900 6520913 -78917567 + L1ME LINE L1 1014 1970 -4570 1988 152 3 0 chr17 6520913 6521232 -78917248 + AluSx SINE Alu 1 312 0 300 214 18 0 chr17 6521325 6521381 -78917099 + MER77 LTR ERV1 292 348 -257 555 238 26 16 chr17 6521420 6521609 -78916871 + L1ME LINE L1 2397 2587 -3953 297 0 0 0 chr17 6522348 6522381 -78916099 + (CA)n Simple_repeat Simple_repeat 2 34 0 600 284 26 0 chr17 6522991 6523146 -78915334 + MER63 DNA MER1_type 1 785 -277 2341 110 0 0 chr17 6523150 6523489 -78914991 + AluSg1 SINE Alu 1 339 0 1265 219 64 0 chr17 6523841 6524106 -78914374 + AluJo SINE Alu 1 282 -30 2373 80 7 3 chr17 6526089 6526391 -78912089 - AluY SINE Alu -8 303 1 2482 86 0 0 chr17 6526392 6526693 -78911787 - AluSg SINE Alu -9 301 1 200 326 184 0 chr17 6526884 6526982 -78911498 + MIR SINE MIR 15 130 -132 205 248 171 19 chr17 6527030 6527135 -78911345 + MIR SINE MIR 116 236 -26 2296 93 3 37 chr17 6528884 6529208 -78909272 - AluSq SINE Alu 0 313 1 32 43 0 0 chr17 6529509 6529555 -78908925 + AT_rich Low_complexity Low_complexity 1 46 0 575 209 25 61 chr17 6529580 6529776 -78908704 - L1ME1 LINE L1 -6 6160 5972 252 0 0 0 chr17 6531668 6531696 -78906784 + (TG)n Simple_repeat Simple_repeat 2 29 0 2486 76 0 0 chr17 6532106 6532407 -78906073 + AluSg SINE Alu 1 301 -9 2408 72 3 0 chr17 6532911 6533202 -78905278 + AluSp SINE Alu 1 292 -21 243 0 0 0 chr17 6533759 6533786 -78904694 + (CACAA)n Simple_repeat Simple_repeat 3 29 0 295 221 147 22 chr17 6535040 6535176 -78903304 + Charlie8 DNA MER1_type 84 236 -2181 2081 107 4 4 chr17 6535978 6536283 -78902197 + AluSg SINE Alu 1 305 0 803 214 77 72 chr17 6536384 6536785 -78901695 - L1MC5 LINE L1 -54 7907 7505 24 0 0 0 chr17 6536995 6537019 -78901461 + AT_rich Low_complexity Low_complexity 1 24 0 7378 31 0 0 chr17 6537032 6538395 -78900085 - L1PA4 LINE L1 0 6155 4769 268 274 21 0 chr17 6538859 6538954 -78899526 + MIR SINE MIR 47 143 -119 623 256 53 19 chr17 6539021 6539228 -78899252 - MIR SINE MIR 0 262 49 3735 45 0 0 chr17 6539430 6539877 -78898603 - L1PA8 LINE L1 -5 6167 5721 422 302 105 12 chr17 6540754 6540926 -78897554 + MIR3 SINE MIR 19 206 -2 460 252 24 155 chr17 6541659 6542040 -78896440 + L2 LINE L2 2904 3234 -38 15661 152 15 24 chr17 6544152 6547270 -78891210 + L1MA3 LINE L1 2950 6007 -1717 225 0 0 0 chr17 6547270 6547295 -78891185 + (TG)n Simple_repeat Simple_repeat 2 26 0 15661 152 15 24 chr17 6547295 6548822 -78889658 + L1MA3 LINE L1 6007 7547 -177 1812 220 74 16 chr17 6549395 6549744 -78888736 - L1MB5 LINE L1 0 6174 5794 2051 84 0 15 chr17 6549744 6550017 -78888463 - AluSx SINE Alu -8 304 36 1812 220 74 16 chr17 6550017 6550099 -78888381 - L1MB5 LINE L1 -380 5794 5718 529 215 8 24 chr17 6550099 6550232 -78888248 + MER5A DNA MER1_type 4 119 -59 215 267 0 80 chr17 6550264 6550339 -78888141 - MER5B DNA MER1_type -4 174 106 227 198 264 24 chr17 6550512 6550604 -78887876 + MIR SINE MIR 40 150 -62 562 247 9 92 chr17 6550624 6550851 -78887629 + L2 LINE L2 1422 1629 -1685 2688 243 171 47 chr17 6551089 6551552 -78886928 + L2 LINE L2 1699 2104 -1209 2367 92 0 0 chr17 6551552 6551857 -78886623 + AluY SINE Alu 1 305 -6 2688 243 171 47 chr17 6551857 6552731 -78885749 + L2 LINE L2 2104 3186 -127 1412 222 66 36 chr17 6552754 6553255 -78885225 - HAL1 LINE L1 -78 2429 1914 703 222 30 30 chr17 6553298 6553465 -78885015 - HAL1 LINE L1 -706 1801 1635 464 208 0 28 chr17 6553519 6553625 -78884855 + L1MA5 LINE L1 6198 6300 0 302 374 17 0 chr17 6553812 6553927 -78884553 + HAL1 LINE L1 1464 1580 -927 336 287 93 20 chr17 6553958 6554108 -78884372 - L1MC5 LINE L1 -152 7809 7649 267 31 0 0 chr17 6554154 6554186 -78884294 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2149 135 3 3 chr17 6554531 6554843 -78883637 - AluSx SINE Alu 0 312 1 1551 247 74 108 chr17 6554883 6555702 -78882778 - L1MEd LINE L1 -744 1746 904 994 100 20 0 chr17 6555702 6555852 -78882628 + L1MA7 LINE L1 6135 6287 -4 1551 247 74 108 chr17 6555852 6556438 -78882042 - L1MEd LINE L1 -1586 904 300 1233 186 138 63 chr17 6556528 6556862 -78881618 - MLT1A1 LTR MaLR -6 359 1 324 248 71 9 chr17 6556893 6557006 -78881474 - L1MEd LINE L1 -5981 138 19 208 368 66 0 chr17 6557623 6557729 -78880751 + L2 LINE L2 3160 3272 0 * 316 295 57 0 chr17 6557721 6557826 -78880654 - MIR3 SINE MIR -30 178 68 219 258 297 45 chr17 6557926 6558081 -78880399 - MIR SINE MIR 0 262 69 688 142 219 19 chr17 6558643 6558798 -78879682 + MER53 DNA DNA 1 186 -3 2292 99 3 3 chr17 6558892 6559196 -78879284 - AluSx SINE Alu -7 305 2 6660 176 19 16 chr17 6559727 6561009 -78877471 + L1P4 LINE L1 3870 5155 -991 1169 139 0 0 chr17 6561005 6561185 -78877295 + L1P4 LINE L1 5603 5782 -383 * 949 103 0 0 chr17 6561185 6561311 -78877169 + AluSq/x SINE Alu 1 126 -187 218 316 18 44 chr17 6561506 6561620 -78876860 + MIR SINE MIR 151 261 -1 239 295 259 7 chr17 6562064 6562203 -78876277 + MIR3 SINE MIR 28 201 -7 331 262 144 55 chr17 6562695 6562897 -78875583 + MIR SINE MIR 12 231 -31 296 262 10 29 chr17 6563851 6563954 -78874526 - MIR SINE MIR -41 221 121 400 184 41 51 chr17 6563962 6564060 -78874420 + MIR SINE MIR 38 134 -128 2286 103 3 22 chr17 6565164 6565483 -78872997 + AluSq SINE Alu 1 313 0 324 243 10 29 chr17 6566537 6566640 -78871840 - MIR SINE MIR -41 221 121 367 179 44 45 chr17 6566648 6566746 -78871734 + MIR SINE MIR 39 135 -73 375 297 125 1 chr17 6567071 6567282 -78871198 + MIR SINE MIR 16 250 -12 2055 115 44 0 chr17 6567394 6567689 -78870791 + AluSq SINE Alu 3 310 -3 821 196 0 19 chr17 6567709 6567778 -78870702 - AluJb SINE Alu 0 361 292 1030 93 6 27 chr17 6567778 6567961 -78870519 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 821 196 0 19 chr17 6567961 6568098 -78870382 - AluJb SINE Alu -69 292 158 190 163 0 47 chr17 6568115 6568158 -78870322 - MIR SINE MIR 0 262 222 240 308 0 0 chr17 6568207 6568272 -78870208 - L2 LINE L2 -207 3065 3001 244 340 100 30 chr17 6568445 6568716 -78869764 - L2 LINE L2 -646 2668 2379 2131 123 13 3 chr17 6568736 6569037 -78869443 + AluSx SINE Alu 1 304 -8 331 88 0 32 chr17 6569441 6569504 -78868976 - FAM SINE Alu -8 171 116 2905 39 0 0 chr17 6569524 6569880 -78868600 - L1P LINE L1 -803 5343 4988 993 27 0 0 chr17 6569880 6569985 -78868495 + L1PA5 LINE L1 6040 6149 -5 545 284 142 0 chr17 6571191 6571402 -78867078 + MIR SINE MIR 10 250 -12 344 274 103 17 chr17 6571483 6571600 -78866880 + MIR SINE MIR 19 145 -63 317 313 45 0 chr17 6571660 6571772 -78866708 - MIR SINE MIR -123 139 23 2015 136 4 0 chr17 6572206 6572486 -78865994 + AluSx SINE Alu 1 281 -31 6014 65 22 12 chr17 6572486 6573243 -78865237 + MER4E LTR ERV1 2 766 0 38165 48 0 1 chr17 6573714 6578327 -78860153 - L1P LINE L1 -1535 4611 2 32 26 0 0 chr17 6578483 6578522 -78859958 + AT_rich Low_complexity Low_complexity 1 39 0 364 309 0 0 chr17 6578619 6578703 -78859777 + Cheshire DNA MER1_type 1 84 -2336 6060 131 45 38 chr17 6578704 6578936 -78859544 - L1MC2 LINE L1 -12 6332 6103 2182 130 10 0 chr17 6578936 6579244 -78859236 - AluSx SINE Alu -1 311 1 6060 131 45 38 chr17 6579244 6580149 -78858331 - L1MC2 LINE L1 -241 6103 5188 1064 248 90 3 chr17 6580152 6580442 -78858038 + Cheshire DNA MER1_type 77 391 -2029 2309 81 0 26 chr17 6580446 6580755 -78857725 - AluSq SINE Alu -12 301 1 225 0 0 0 chr17 6580938 6580963 -78857517 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 6581020 6581048 -78857432 + (TG)n Simple_repeat Simple_repeat 1 28 0 668 280 92 5 chr17 6581055 6581262 -78857218 - MIR SINE MIR -30 232 8 315 220 0 0 chr17 6581529 6581588 -78856892 - MER63 DNA MER1_type -89 747 689 2206 137 49 22 chr17 6581674 6582039 -78856441 + THE1C LTR MaLR 1 375 0 519 254 35 7 chr17 6582948 6583090 -78855390 - MIR SINE MIR -39 223 78 375 160 80 0 chr17 6583090 6583190 -78855290 + L1MC4 LINE L1 6982 7089 -953 510 231 162 48 chr17 6583219 6583265 -78855215 + L1ME3A LINE L1 5841 5880 -290 369 0 0 0 chr17 6583265 6583306 -78855174 + (CA)n Simple_repeat Simple_repeat 2 42 0 510 231 162 48 chr17 6583306 6583488 -78854992 + L1ME3A LINE L1 5880 6095 -75 495 184 10 19 chr17 6583495 6583598 -78854882 + MLT1E LTR MaLR 10 111 -482 6319 52 0 3 chr17 6584965 6585697 -78852783 - L1PA6 LINE L1 -5 6149 5420 22 0 0 0 chr17 6585731 6585753 -78852727 + AT_rich Low_complexity Low_complexity 1 22 0 2242 94 3 0 chr17 6585828 6586114 -78852366 + AluSp SINE Alu 5 291 -22 188 139 0 23 chr17 6586129 6586172 -78852308 + (TAA)n Simple_repeat Simple_repeat 3 44 0 329 248 256 15 chr17 6586185 6586318 -78852162 - MIR SINE MIR -19 243 79 638 240 69 6 chr17 6586423 6586598 -78851882 + MIR SINE MIR 63 248 -14 319 371 68 37 chr17 6586781 6587075 -78851405 - L2 LINE L2 -385 2929 2627 1422 212 156 47 chr17 6587272 6587702 -78850778 + MLT1J LTR MaLR 28 504 -7 231 250 0 0 chr17 6588343 6588403 -78850077 - HAL1 LINE L1 0 2507 2448 2291 77 0 3 chr17 6588433 6588718 -78849762 - AluY SINE Alu -27 284 1 596 221 107 50 chr17 6588737 6589035 -78849445 - HAL1 LINE L1 -182 2325 2011 24 0 0 0 chr17 6589101 6589125 -78849355 + AT_rich Low_complexity Low_complexity 1 24 0 2275 207 53 14 chr17 6589323 6589873 -78848607 - HAL1 LINE L1 -542 1965 1395 2206 154 30 14 chr17 6589915 6590284 -78848196 + THE1C LTR MaLR 1 375 0 3315 117 190 3 chr17 6590287 6590861 -78847619 + THE1C-int LTR MaLR 4 684 -896 1783 166 3 3 chr17 6590873 6591157 -78847323 - AluJo SINE Alu -18 294 11 1607 238 107 46 chr17 6591157 6591809 -78846671 - HAL1 LINE L1 -1226 1281 590 396 306 65 36 chr17 6591914 6592162 -78846318 - HAL1 LINE L1 -2139 368 114 272 333 67 0 chr17 6592245 6592335 -78846145 - HAL1 LINE L1 -2396 111 16 255 308 143 42 chr17 6592393 6592546 -78845934 + L2 LINE L2 1860 1996 -1318 2525 75 0 0 chr17 6592546 6592852 -78845628 - AluY SINE Alu -5 306 1 255 308 143 42 chr17 6592852 6593033 -78845447 + L2 LINE L2 1996 2228 -1086 197 308 55 22 chr17 6593406 6593497 -78844983 + L2 LINE L2 3177 3270 -2 525 341 64 47 chr17 6593506 6594022 -78844458 - L2 LINE L2 -898 2416 1892 221 305 98 12 chr17 6594123 6594205 -78844275 + L2 LINE L2 3141 3229 -43 2601 254 70 35 chr17 6594212 6595348 -78843132 - L1ME3A LINE L1 0 6170 5074 477 0 0 0 chr17 6595348 6595401 -78843079 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2601 254 70 35 chr17 6595401 6595430 -78843050 - L1ME3A LINE L1 -1096 5074 5047 2271 95 0 0 chr17 6595430 6595725 -78842755 - AluY SINE Alu -16 295 1 2601 254 70 35 chr17 6595725 6595988 -78842492 - L1ME3A LINE L1 -1123 5047 4794 2441 75 3 7 chr17 6595988 6596293 -78842187 - AluSq SINE Alu -9 304 1 2601 254 70 35 chr17 6596293 6596577 -78841903 - L1ME3A LINE L1 -1376 4794 4393 2203 123 0 0 chr17 6596671 6596972 -78841508 - AluY SINE Alu -8 303 3 1026 265 52 34 chr17 6597124 6597449 -78841031 + MER102b DNA MER1_type 11 341 0 2099 115 7 0 chr17 6597600 6597886 -78840594 + AluSx SINE Alu 1 288 -24 818 192 0 0 chr17 6598045 6598175 -78840305 + MER2 DNA MER2_type 6 135 -210 329 131 16 0 chr17 6598177 6598238 -78840242 + CT-rich Low_complexity Low_complexity 2 63 0 751 216 0 8 chr17 6598242 6598376 -78840104 - FLAM_A SINE Alu 0 133 1 612 83 0 0 chr17 6598378 6598462 -78840018 + MER2 DNA MER2_type 127 210 -135 198 297 142 39 chr17 6598555 6598710 -78839770 + L2 LINE L2 3143 3313 0 2087 203 115 12 chr17 6599182 6599694 -78838786 - L1ME3A LINE L1 -8 6162 5598 285 182 0 0 chr17 6599729 6599784 -78838696 + GA-rich Low_complexity Low_complexity 3 57 0 208 299 169 40 chr17 6599942 6600267 -78838213 - L3 LINE CR1 -162 1415 1049 293 301 96 15 chr17 6600694 6600830 -78837650 + MIR3 SINE MIR 29 175 -33 288 311 60 11 chr17 6601036 6601219 -78837261 + HAL1 LINE L1 1158 1349 -1158 828 175 19 31 chr17 6601278 6601438 -78837042 + MER2 DNA MER2_type 16 173 -172 188 46 0 161 chr17 6601477 6601564 -78836916 + (CAATA)n Simple_repeat Simple_repeat 2 74 0 369 250 0 0 chr17 6601660 6601736 -78836744 + MER2 DNA MER2_type 269 344 -1 421 315 160 18 chr17 6601841 6602184 -78836296 + HAL1 LINE L1 1526 1917 -590 601 183 76 8 chr17 6602286 6602417 -78836063 + FRAM SINE Alu 11 150 -26 22 35 0 0 chr17 6602417 6602446 -78836034 + AT_rich Low_complexity Low_complexity 1 29 0 869 154 0 0 chr17 6602486 6602616 -78835864 + FLAM_C SINE Alu 1 130 -3 263 310 70 20 chr17 6602866 6602966 -78835514 - L2 LINE L2 0 3272 3168 982 223 45 67 chr17 6602971 6603400 -78835080 + L1MC4a LINE L1 5593 6016 -105 446 296 133 26 chr17 6604689 6604915 -78833565 - MIR SINE MIR -4 258 9 791 218 19 28 chr17 6605563 6605774 -78832706 + L1MC4a LINE L1 5673 5881 -1927 278 53 0 26 chr17 6605784 6605822 -78832658 - FRAM/FAM SINE Alu -99 67 31 250 271 181 45 chr17 6605863 6606084 -78832396 + L1MC4a LINE L1 5918 6168 -1640 27 0 0 0 chr17 6606090 6606117 -78832363 + AT_rich Low_complexity Low_complexity 1 27 0 1432 153 12 81 chr17 6606660 6606980 -78831500 - AluJo SINE Alu -14 298 1 448 242 67 17 chr17 6606980 6607100 -78831380 + MIR SINE MIR 77 202 -60 1509 117 36 97 chr17 6607100 6607320 -78831160 - THE1C LTR MaLR 0 375 178 2408 96 0 0 chr17 6607320 6607621 -78830859 + AluSx SINE Alu 1 301 -11 1509 117 36 97 chr17 6607621 6607708 -78830772 - THE1C LTR MaLR -197 178 87 22 0 0 0 chr17 6608034 6608056 -78830424 + AT_rich Low_complexity Low_complexity 1 22 0 760 232 16 20 chr17 6608155 6608401 -78830079 - L1ME LINE L1 -5054 1016 772 1694 180 7 7 chr17 6608714 6609003 -78829477 - AluJb SINE Alu -23 289 1 22 35 0 0 chr17 6609389 6609418 -78829062 + AT_rich Low_complexity Low_complexity 1 29 0 2349 90 3 0 chr17 6609896 6610206 -78828274 + AluY SINE Alu 1 311 0 1189 249 28 82 chr17 6611162 6611732 -78826748 - MER34 LTR ERV1 -3 539 1 22 0 0 0 chr17 6612018 6612040 -78826440 + AT_rich Low_complexity Low_complexity 1 22 0 563 268 41 36 chr17 6612600 6612794 -78825686 - MIR SINE MIR -48 214 20 377 197 0 0 chr17 6613257 6613328 -78825152 - MIR SINE MIR -34 228 158 962 272 75 80 chr17 6613502 6614327 -78824153 + HAL1 LINE L1 2 1019 -1488 6891 53 10 0 chr17 6614333 6615671 -78822809 - L1PA7 LINE L1 0 6154 4801 2052 77 50 0 chr17 6615671 6615932 -78822548 + AluY SINE Alu 21 294 -17 13350 103 4 28 chr17 6615932 6618390 -78820090 - L1P3 LINE L1 -4009 2452 7 2420 145 36 19 chr17 6618892 6619089 -78819391 + MSTA LTR MaLR 1 193 -235 2570 144 44 2 chr17 6619089 6619500 -78818980 - MSTA LTR MaLR 0 428 1 2420 145 36 19 chr17 6619500 6619723 -78818757 + MSTA LTR MaLR 193 428 0 551 293 131 52 chr17 6620845 6620960 -78817520 - HAL1 LINE L1 -1709 798 693 2211 78 27 10 chr17 6620960 6621256 -78817224 - AluY SINE Alu -10 301 1 551 293 131 52 chr17 6621256 6621638 -78816842 - HAL1 LINE L1 -1814 693 262 2005 176 40 62 chr17 6621734 6621814 -78816666 - MSTB LTR MaLR 0 426 346 2083 87 4 0 chr17 6621814 6622080 -78816400 + AluSc SINE Alu 35 301 -8 2005 176 40 62 chr17 6622080 6622419 -78816061 - MSTB LTR MaLR -80 346 16 24 0 0 0 chr17 6622434 6622458 -78816022 + AT_rich Low_complexity Low_complexity 1 24 0 874 275 48 34 chr17 6622469 6622883 -78815597 + L1PBa LINE L1 135 554 -6309 904 226 43 4 chr17 6622909 6623139 -78815341 + L1PBa LINE L1 612 850 -6013 266 214 18 0 chr17 6623368 6623424 -78815056 - MER89-int LTR ERV1 -2166 2481 2425 641 147 121 17 chr17 6623437 6623553 -78814927 - FLAM_C SINE Alu -14 129 2 481 211 0 90 chr17 6624045 6624178 -78814302 - MER89-int LTR ERV1 -4076 860 740 385 304 52 55 chr17 6624622 6624911 -78813569 - MER89-int LTR ERV1 -3156 3645 3358 4142 133 44 5 chr17 6625613 6626250 -78812230 - L1PA15 LINE L1 -22 6143 5482 606 280 92 5 chr17 6626644 6626851 -78811629 + MIR SINE MIR 8 232 -30 252 0 0 0 chr17 6626858 6626886 -78811594 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 0 0 0 chr17 6626943 6626968 -78811512 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2648 24 7 0 chr17 6627151 6627447 -78811033 + AluY SINE Alu 1 298 -13 1151 151 5 11 chr17 6627452 6627638 -78810842 - Tigger3(Golem) DNA MER2_type -284 2745 2561 715 115 10 0 chr17 6627639 6627743 -78810737 + AluSg SINE Alu 2 106 -204 16021 215 27 29 chr17 6627843 6631624 -78806856 - L1PA13 LINE L1 -826 5971 2185 890 109 0 51 chr17 6631624 6631761 -78806719 - FLAM_C SINE Alu -3 130 1 16021 215 27 29 chr17 6631761 6632057 -78806423 - L1PA13 LINE L1 -4612 2185 1890 1756 123 88 0 chr17 6632057 6632206 -78806274 - AluSg1 SINE Alu -24 285 151 360 0 0 0 chr17 6632206 6632246 -78806234 + (TG)n Simple_repeat Simple_repeat 2 41 0 1756 123 88 0 chr17 6632246 6632356 -78806124 - AluSg1 SINE Alu -158 151 3 16021 215 27 29 chr17 6632356 6633029 -78805451 - L1PA13 LINE L1 -4907 1890 1180 1070 297 58 52 chr17 6633008 6633530 -78804950 - L1PA13 LINE L1 -5818 969 445 * 810 203 0 7 chr17 6633527 6633680 -78804800 - L1PA13 LINE L1 -6632 155 4 * 1350 226 69 64 chr17 6633777 6634359 -78804121 + LTR24B LTR ERV1 1 635 0 1104 262 46 40 chr17 6634359 6634959 -78803521 + LTR24B-int LTR ERV1 2 745 -4378 180 179 0 0 chr17 6635268 6635307 -78803173 + CT-rich Low_complexity Low_complexity 5 43 0 324 307 17 40 chr17 6635973 6636149 -78802331 + MER89-int LTR ERV1 3480 3651 -3440 1810 144 17 10 chr17 6636237 6636535 -78801945 - AluJo SINE Alu -12 300 1 327 277 43 11 chr17 6636605 6636699 -78801781 + MER89-int LTR ERV1 2538 2634 -4167 2524 4 0 15 chr17 6636866 6637140 -78801340 + AluYb8 SINE Alu 20 289 -29 2080 96 0 31 chr17 6637383 6637674 -78800806 + AluSq SINE Alu 1 282 -31 180 0 0 0 chr17 6637675 6637695 -78800785 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 205 182 0 0 chr17 6638386 6638419 -78800061 + polypurine Low_complexity Low_complexity 1 33 0 469 118 0 0 chr17 6638842 6638910 -78799570 + LTR24B LTR ERV1 501 568 -8 2353 92 0 3 chr17 6639127 6639422 -78799058 - AluSc SINE Alu -15 294 1 3689 198 106 15 chr17 6639422 6640229 -78798251 - L1MC2 LINE L1 -13 6331 5428 1707 167 23 13 chr17 6640229 6640535 -78797945 - AluJb SINE Alu -3 309 1 3689 198 106 15 chr17 6640535 6640651 -78797829 - L1MC2 LINE L1 -916 5428 5324 2402 92 0 0 chr17 6640651 6640956 -78797524 - AluSx SINE Alu -7 305 1 1016 125 60 50 chr17 6640981 6641181 -78797299 - L1MB2 LINE L1 -2 6169 5968 844 172 27 59 chr17 6641181 6641367 -78797113 - LTR57 LTR ERVL 0 411 232 2400 71 0 7 chr17 6641411 6641706 -78796774 - AluY SINE Alu -18 293 1 990 92 48 121 chr17 6641772 6641979 -78796501 - L1MA2 LINE L1 -18 6286 6095 2517 65 0 10 chr17 6641992 6642301 -78796179 - AluY SINE Alu -5 306 1 1415 129 37 0 chr17 6642301 6642518 -78795962 - LTR57 LTR ERVL -186 225 1 2438 106 0 0 chr17 6644101 6644413 -78794067 + AluSx SINE Alu 1 312 0 193 305 98 12 chr17 6644782 6644864 -78793616 + L2 LINE L2 3141 3229 -43 408 72 9 0 chr17 6644902 6644968 -78793512 - MER51A LTR ERV1 -308 69 1 238 278 130 17 chr17 6645000 6645115 -78793365 + L1M4 LINE L1 4902 5029 -1117 25 31 0 0 chr17 6645303 6645335 -78793145 + AT_rich Low_complexity Low_complexity 1 32 0 1524 108 33 21 chr17 6645532 6645879 -78792601 + LTR46 LTR ERV1 1 404 -56 354 23 0 0 chr17 6645883 6645926 -78792554 + (TC)n Simple_repeat Simple_repeat 2 44 0 2382 94 3 0 chr17 6645929 6646236 -78792244 - AluSp SINE Alu -5 308 1 563 82 0 0 chr17 6646245 6646317 -78792163 - MER4E LTR ERV1 -282 497 426 1934 148 26 58 chr17 6646317 6646695 -78791785 + MER66B LTR ERV1 1 366 -120 1636 112 13 0 chr17 6646701 6646925 -78791555 + AluSg/x SINE Alu 78 304 -8 1683 171 27 0 chr17 6646932 6647224 -78791256 + MER4D LTR ERV1 604 903 0 320 123 62 0 chr17 6647629 6647694 -78790786 + L1MC2 LINE L1 6267 6335 -9 7928 21 0 2 chr17 6648127 6649534 -78788946 + L1PA3 LINE L1 4752 6155 0 24 32 0 0 chr17 6649934 6649965 -78788515 + AT_rich Low_complexity Low_complexity 1 31 0 387 172 0 0 chr17 6650605 6650669 -78787811 - MSTD LTR MaLR 0 396 333 2253 92 3 0 chr17 6650677 6650959 -78787521 + AluY SINE Alu 2 284 -27 1262 234 97 6 chr17 6650979 6651299 -78787181 - MSTD LTR MaLR -47 349 1 21 36 0 0 chr17 6651987 6652015 -78786465 + AT_rich Low_complexity Low_complexity 1 28 0 1496 159 90 34 chr17 6652164 6652594 -78785886 + LTR54 LTR ERV1 1 493 -5 1184 268 45 59 chr17 6652993 6653486 -78784994 - LTR33A LTR ERVL 0 523 38 797 199 17 6 chr17 6653532 6653708 -78784772 + L1MC4 LINE L1 7438 7615 -427 556 138 0 47 chr17 6653717 6653963 -78784517 + AluJ SINE Alu 11 294 -18 1067 256 73 42 chr17 6653964 6654348 -78784132 + L1MC4 LINE L1 7620 8019 -23 2078 127 0 3 chr17 6654348 6654640 -78783840 - AluSg SINE Alu -17 293 3 1067 256 73 42 chr17 6654640 6654665 -78783815 + L1MC4 LINE L1 8019 8042 0 629 270 90 69 chr17 6654880 6655115 -78783365 + MLT1H LTR MaLR 1 230 -365 5533 45 1 1 chr17 6655115 6655781 -78782699 + L1PA7 LINE L1 5483 6148 -6 629 270 90 69 chr17 6655781 6656004 -78782476 + MLT1H LTR MaLR 230 447 -148 2478 42 19 13 chr17 6656004 6656313 -78782167 - AluY SINE Alu 0 311 1 629 270 90 69 chr17 6656313 6656356 -78782124 + MLT1H LTR MaLR 447 488 -107 2308 138 14 6 chr17 6656356 6656719 -78781761 + MER47A DNA MER2_type 1 366 0 629 270 90 69 chr17 6656719 6656736 -78781744 + MLT1H LTR MaLR 488 588 -7 9952 195 90 16 chr17 6656864 6657471 -78781009 - L1M3c LINE L1 -835 6730 6169 2411 196 16 43 chr17 6657471 6657728 -78780752 - MER70A LTR ERVL 0 472 233 1897 122 79 0 chr17 6657728 6658007 -78780473 - AluSg SINE Alu -9 301 1 2411 196 16 43 chr17 6658007 6658234 -78780246 - MER70A LTR ERVL -239 233 1 9952 195 90 16 chr17 6658234 6659702 -78778778 - L1M3c LINE L1 -1396 6169 4810 189 0 0 0 chr17 6659702 6659723 -78778757 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 9952 195 90 16 chr17 6659723 6660376 -78778104 - L1M3c LINE L1 -2755 4810 4206 2371 90 0 0 chr17 6660376 6660675 -78777805 + AluSg1 SINE Alu 1 299 -10 9952 195 90 16 chr17 6660675 6661065 -78777415 - L1M3c LINE L1 -3359 4206 3207 1454 202 37 118 chr17 6661066 6661663 -78776817 - L1 LINE L1 -4171 3395 2719 270 0 0 0 chr17 6661665 6661695 -78776785 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7353 11 2 0 chr17 6661695 6662511 -78775969 - L1PA3 LINE L1 -10 6145 5328 498 213 25 0 chr17 6662484 6662606 -78775874 - L1M3c LINE L1 -4555 2941 2817 * 537 306 117 20 chr17 6662711 6662959 -78775521 - L1M3c LINE L1 -5546 1950 1679 1540 250 32 5 chr17 6663033 6663409 -78775071 - L1M3c LINE L1 -5755 1741 1356 269 297 50 30 chr17 6663883 6663984 -78774496 - L2 LINE L2 -4 3309 3207 507 212 63 112 chr17 6664007 6664248 -78774232 - L1MC5 LINE L1 -126 7916 7665 1942 115 7 7 chr17 6664248 6664527 -78773953 + AluSx SINE Alu 1 279 -33 279 54 0 0 chr17 6664527 6664564 -78773916 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 507 212 63 112 chr17 6664564 6664660 -78773820 - L1MC5 LINE L1 -375 7667 7505 669 249 39 11 chr17 6664783 6664964 -78773516 - L1ME2 LINE L1 -158 6006 5821 1452 104 0 0 chr17 6664981 6665163 -78773317 + AluSg SINE Alu 1 182 -128 2200 97 3 23 chr17 6665171 6665480 -78773000 + AluSx SINE Alu 1 303 -9 284 83 21 0 chr17 6665480 6665528 -78772952 + L1PA16 LINE L1 6118 6166 0 2098 120 0 10 chr17 6665543 6665869 -78772611 + AluSx SINE Alu 5 312 0 300 345 117 19 chr17 6666449 6666655 -78771825 + L1ME LINE L1 598 823 -5573 387 210 313 25 chr17 6666684 6667059 -78771421 + L1ME LINE L1 776 1205 -5201 4091 243 52 37 chr17 6667080 6669407 -78769073 + L1PBa LINE L1 3 1644 -5219 1576 160 3 30 chr17 6669404 6669691 -78768789 + L1PB3 LINE L1 5889 6161 -5 * 1383 262 52 15 chr17 6669696 6670158 -78768322 + L1ME LINE L1 1217 1695 -4711 6110 78 29 19 chr17 6670158 6671062 -78767418 + L1PB1 LINE L1 5237 6148 -3 1403 194 9 34 chr17 6671072 6671422 -78767058 + L1ME LINE L1 1691 2031 -4375 180 0 0 0 chr17 6671659 6671679 -78766801 + (CA)n Simple_repeat Simple_repeat 2 21 0 439 231 46 0 chr17 6672154 6672262 -78766218 - L2 LINE L2 -2 3311 3199 261 258 114 135 chr17 6672850 6673183 -78765297 + L2 LINE L2 2943 3268 -4 1649 175 0 31 chr17 6673650 6673941 -78764539 + AluJo SINE Alu 1 282 -30 226 268 18 116 chr17 6673962 6674074 -78764406 - L2 LINE L2 -14 3258 3158 270 0 0 0 chr17 6674192 6674222 -78764258 + (TG)n Simple_repeat Simple_repeat 1 30 0 742 149 9 0 chr17 6674223 6674337 -78764143 - FLAM_C SINE Alu -28 115 1 2272 104 7 10 chr17 6675180 6675315 -78763165 + AluSx SINE Alu 1 135 -177 2377 95 0 7 chr17 6675315 6675621 -78762859 + AluSg SINE Alu 1 304 -6 2272 104 7 10 chr17 6675621 6675794 -78762686 + AluSx SINE Alu 135 308 -4 2344 76 0 3 chr17 6676450 6676741 -78761739 - AluY SINE Alu -21 290 1 338 67 0 0 chr17 6676822 6676867 -78761613 - MADE1 DNA Mariner -35 45 1 2767 215 77 58 chr17 6677610 6678291 -78760189 - HAL1 LINE L1 -604 1903 1196 2615 55 0 7 chr17 6678291 6678600 -78759880 - AluY SINE Alu -4 307 1 2767 215 77 58 chr17 6678600 6678914 -78759566 - HAL1 LINE L1 -1311 1196 889 2610 146 34 0 chr17 6679033 6679451 -78759029 + MSTB1 LTR MaLR 1 432 0 349 287 0 10 chr17 6679452 6679553 -78758927 + MIR SINE MIR 101 200 -62 1123 259 90 25 chr17 6679690 6680077 -78758403 + MLT1K LTR MaLR 108 588 0 871 295 16 28 chr17 6680173 6680536 -78757944 - L1ME LINE L1 -343 5778 5420 191 277 48 48 chr17 6680696 6680779 -78757701 + MIR SINE MIR 25 107 -101 387 248 48 0 chr17 6680960 6681085 -78757395 + L1ME1 LINE L1 6035 6165 -1 1460 76 0 0 chr17 6681091 6681263 -78757217 + AluY SINE Alu 1 172 -139 1757 196 124 28 chr17 6681366 6681628 -78756852 - L1MDa LINE L1 -4791 1749 1514 195 42 0 0 chr17 6681628 6681652 -78756828 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1757 196 124 28 chr17 6681652 6681890 -78756590 - L1MDa LINE L1 -5026 1514 1201 2174 136 0 7 chr17 6681891 6682200 -78756280 - AluSx SINE Alu -5 307 1 1910 240 27 27 chr17 6682219 6682665 -78755815 - L1MDa LINE L1 -6061 479 34 2448 169 62 102 chr17 6682666 6683489 -78754991 - L1ME1 LINE L1 -341 5825 5065 2073 88 0 4 chr17 6683489 6683750 -78754730 + AluSg SINE Alu 37 296 -14 2448 169 62 102 chr17 6683750 6684107 -78754373 - L1ME1 LINE L1 -1101 5065 4695 606 217 35 0 chr17 6684208 6684323 -78754157 - MER44D DNA MER2_type -220 389 1 412 225 75 116 chr17 6684331 6684470 -78754010 - HAL1 LINE L1 -2223 284 162 2418 89 3 3 chr17 6684470 6684783 -78753697 - AluSp SINE Alu 0 313 1 412 225 75 116 chr17 6684783 6684936 -78753544 - HAL1 LINE L1 -2345 162 4 348 276 95 65 chr17 6684910 6685178 -78753302 - L1MEd LINE L1 -4901 1235 945 * 2503 64 3 0 chr17 6685178 6685474 -78753006 - AluY SINE Alu -14 297 1 348 276 95 65 chr17 6685474 6685680 -78752800 - L1MEd LINE L1 -5191 945 747 26 30 0 0 chr17 6685826 6685859 -78752621 + AT_rich Low_complexity Low_complexity 1 33 0 461 104 0 0 chr17 6685860 6685927 -78752553 - L1PA10 LINE L1 -13 6155 6089 4460 91 15 7 chr17 6685927 6686540 -78751940 + L1PA10 LINE L1 5459 6076 -92 2387 73 7 3 chr17 6686541 6686844 -78751636 - AluY SINE Alu -7 304 1 962 197 126 74 chr17 6687077 6687426 -78751054 - MER66A LTR ERV1 -40 438 66 2251 113 7 0 chr17 6687426 6687736 -78750744 - AluSx SINE Alu 0 312 1 962 197 126 74 chr17 6687736 6687776 -78750704 - MER66A LTR ERV1 -412 66 29 25 0 0 0 chr17 6687854 6687879 -78750601 + AT_rich Low_complexity Low_complexity 1 25 0 2044 148 3 3 chr17 6687972 6688282 -78750198 - AluJo SINE Alu -2 310 1 251 179 0 36 chr17 6688542 6688598 -78749882 - MIR SINE MIR -21 241 188 1144 223 47 69 chr17 6688820 6689215 -78749265 + MLT1K LTR MaLR 165 586 -29 2146 120 3 13 chr17 6689245 6689554 -78748926 - AluSq SINE Alu -2 311 6 258 246 29 0 chr17 6689561 6689630 -78748850 + MLT1K LTR MaLR 514 584 -4 2429 77 3 22 chr17 6689814 6690125 -78748355 - AluSp SINE Alu -8 305 1 284 0 28 0 chr17 6690379 6690415 -78748065 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2346 152 44 12 chr17 6690467 6690875 -78747605 - MSTB LTR MaLR -4 422 2 2386 89 0 0 chr17 6691035 6691326 -78747154 - AluSx SINE Alu -21 291 1 434 110 0 0 chr17 6691648 6691721 -78746759 - L1MC3 LINE L1 -1 7784 7712 2001 82 74 0 chr17 6692407 6692677 -78745803 - AluSx SINE Alu -22 290 1 787 276 133 44 chr17 6692679 6693121 -78745359 - HAL1 LINE L1 -1656 851 357 2251 110 0 3 chr17 6693121 6693429 -78745051 - AluSq SINE Alu -6 307 1 787 276 133 44 chr17 6693429 6693489 -78744991 - HAL1 LINE L1 -2150 357 304 328 165 44 77 chr17 6693501 6693592 -78744888 - Tigger7 DNA MER2_type 0 2587 2500 471 171 0 0 chr17 6693729 6693799 -78744681 - AluJ/FLAM SINE Alu -240 72 3 216 0 0 0 chr17 6693812 6693836 -78744644 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1840 98 0 0 chr17 6693836 6694072 -78744408 - AluSx SINE Alu -32 280 45 5356 103 31 16 chr17 6694076 6694472 -78744008 - Tigger1 DNA MER2_type -948 1470 1081 2274 114 0 0 chr17 6694472 6694771 -78743709 - AluSg SINE Alu -10 300 2 5356 103 31 16 chr17 6694771 6695187 -78743293 - Tigger1 DNA MER2_type -1337 1081 646 1349 108 15 0 chr17 6695187 6695382 -78743098 - AluSc SINE Alu -13 296 99 530 161 0 76 chr17 6695493 6695611 -78742869 + AluJo SINE Alu 112 220 -92 195 167 136 0 chr17 6695653 6695719 -78742761 + MIR SINE MIR 127 201 -61 267 31 0 0 chr17 6695743 6695775 -78742705 + (CA)n Simple_repeat Simple_repeat 1 32 0 591 212 8 0 chr17 6696212 6696353 -78742127 + FLAM_A SINE Alu 1 142 0 905 169 17 11 chr17 6696398 6696576 -78741904 - MER96B DNA MER1_type? -237 180 2 2313 110 0 7 chr17 6697053 6697362 -78741118 + AluSx SINE Alu 1 307 -5 265 359 57 31 chr17 6697426 6697744 -78740736 + L2 LINE L2 1217 1542 -1772 623 165 65 88 chr17 6697744 6697793 -78740687 - MER106A DNA MER1_type -3 233 184 2362 95 3 7 chr17 6697793 6698099 -78740381 - AluSp SINE Alu -8 305 1 623 165 65 88 chr17 6698099 6698219 -78740261 - MER106A DNA MER1_type -52 184 68 659 149 0 0 chr17 6698249 6698343 -78740137 + 5S rRNA rRNA 1 94 -27 1141 150 86 0 chr17 6698730 6698960 -78739520 - L1MA9 LINE L1 0 6312 6064 1186 206 26 90 chr17 6698951 6699020 -78739460 + MSTB2 LTR MaLR 7 79 -378 1984 142 7 3 chr17 6699020 6699322 -78739158 + AluJb SINE Alu 9 311 -1 1186 206 26 90 chr17 6699322 6699597 -78738883 + MSTB2 LTR MaLR 79 329 -128 2186 88 3 3 chr17 6699698 6699994 -78738486 - AluSq SINE Alu -17 296 1 1549 150 52 21 chr17 6700281 6700294 -78738186 - AluJb SINE Alu -7 295 284 459 63 0 0 chr17 6700294 6700357 -78738123 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1549 150 52 21 chr17 6700357 6700629 -78737851 - AluJb SINE Alu -18 284 1 267 345 54 20 chr17 6700951 6701176 -78737304 + L2 LINE L2 2745 2969 -303 957 189 4 88 chr17 6701587 6701652 -78736828 + MIR SINE MIR 6 75 -187 4161 186 36 45 chr17 6701652 6702614 -78735866 - LTR13 LTR ERVK 0 954 1 957 189 4 88 chr17 6702614 6702786 -78735694 + MIR SINE MIR 75 223 -39 1852 151 0 19 chr17 6702823 6703135 -78735345 - AluSx SINE Alu -6 306 1 900 125 21 0 chr17 6703431 6703575 -78734905 + AluSp/q SINE Alu 163 309 -4 1061 92 12 0 chr17 6703575 6703738 -78734742 + Tigger1 DNA MER2_type 1584 1748 -670 1777 101 0 0 chr17 6703738 6703975 -78734505 + AluSq SINE Alu 1 237 -76 1945 126 0 26 chr17 6704246 6704555 -78733925 + AluJb SINE Alu 1 301 -11 2171 104 0 7 chr17 6704592 6704890 -78733590 + AluSx SINE Alu 1 296 -16 240 237 13 40 chr17 6704892 6704968 -78733512 + MER67C LTR ERV1 28 101 -609 2050 140 25 6 chr17 6705068 6705082 -78733398 + MER67C LTR ERV1 347 359 -351 2268 104 0 0 chr17 6705082 6705379 -78733101 + AluSx SINE Alu 1 297 -15 2050 140 25 6 chr17 6705379 6705721 -78732759 + MER67C LTR ERV1 359 710 0 200 282 84 0 chr17 6705883 6705954 -78732526 - MIR SINE MIR -1 261 185 207 0 0 0 chr17 6706344 6706367 -78732113 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2360 69 0 10 chr17 6709133 6709437 -78729043 - AluY SINE Alu -10 301 1 203 208 19 38 chr17 6710192 6710245 -78728235 + C-rich Low_complexity Low_complexity 2 53 0 207 310 129 9 chr17 6711664 6711780 -78726700 + MIR3 SINE MIR 36 165 -43 984 216 16 0 chr17 6712277 6712462 -78726018 - MER5A DNA MER1_type 0 189 2 1911 152 0 13 chr17 6712526 6712828 -78725652 - AluSx SINE Alu -14 298 1 838 174 0 0 chr17 6714084 6714216 -78724264 + FLAM_C SINE Alu 2 133 0 1714 182 0 3 chr17 6715010 6715306 -78723174 - AluJo SINE Alu -17 295 1 395 314 95 71 chr17 6715613 6716107 -78722373 - L1M4 LINE L1 -2640 3506 3001 404 342 67 53 chr17 6715656 6716092 -78722388 + HAL1b LINE L1 903 1344 -4 23 0 0 0 chr17 6716119 6716142 -78722338 + AT_rich Low_complexity Low_complexity 1 23 0 360 311 56 25 chr17 6716504 6716665 -78721815 - MIR SINE MIR -69 193 28 2179 73 0 0 chr17 6717051 6717326 -78721154 - AluSg SINE Alu -4 306 32 21 0 0 0 chr17 6717633 6717654 -78720826 + GC_rich Low_complexity Low_complexity 1 21 0 1332 207 74 45 chr17 6719150 6719183 -78719297 - MLT1A1 LTR MaLR -2 363 332 2368 73 3 0 chr17 6719183 6719483 -78718997 + AluSg SINE Alu 1 301 -9 1332 207 74 45 chr17 6719483 6719802 -78718678 - MLT1A1 LTR MaLR -33 332 1 316 339 54 0 chr17 6719920 6720032 -78718448 + MIR SINE MIR 30 147 -61 1913 109 8 0 chr17 6720073 6720338 -78718142 + AluSx SINE Alu 29 295 -17 240 279 149 11 chr17 6720357 6720626 -78717854 - HAL1 LINE L1 -1306 1201 896 1001 124 103 5 chr17 6720635 6720829 -78717651 - AluSg/x SINE Alu -15 295 83 453 89 0 0 chr17 6720948 6721004 -78717476 - AluJ/FLAM SINE Alu -247 65 10 2354 64 0 0 chr17 6721024 6721320 -78717160 - AluY SINE Alu -15 296 1 329 274 234 11 chr17 6721402 6721577 -78716903 - MIR SINE MIR 0 262 49 947 220 117 47 chr17 6722534 6722834 -78715646 - MER58B DNA MER1_type -2 339 19 1712 126 15 4 chr17 6723414 6723683 -78714797 - AluSx SINE Alu 0 312 41 1811 54 0 0 chr17 6724882 6725105 -78713375 + AluSg/x SINE Alu 75 297 -13 618 246 110 18 chr17 6725845 6726073 -78712407 + MIR SINE MIR 14 262 0 26 101 0 0 chr17 6726916 6727005 -78711475 + GC_rich Low_complexity Low_complexity 1 89 0 297 0 0 0 chr17 6736664 6736697 -78701783 + (CAG)n Simple_repeat Simple_repeat 1 33 0 767 212 53 6 chr17 6737250 6737420 -78701060 + MER5B DNA MER1_type 1 178 0 1165 173 0 20 chr17 6737518 6737720 -78700760 + AluJo SINE Alu 1 198 -114 233 289 56 22 chr17 6741865 6741955 -78696525 + MIR3 SINE MIR 106 198 -10 1762 183 112 23 chr17 6741955 6742250 -78696230 - MSTC LTR MaLR 0 428 88 2268 78 7 7 chr17 6742250 6742546 -78695934 - AluY SINE Alu -15 296 1 1762 183 112 23 chr17 6742546 6742643 -78695837 - MSTC LTR MaLR -340 88 1 5287 205 92 106 chr17 6742643 6742933 -78695547 - MSTC-int LTR MaLR 0 1735 1442 2236 82 7 0 chr17 6742933 6743227 -78695253 - AluSg SINE Alu -14 296 1 5287 205 92 106 chr17 6743227 6743828 -78694652 - MSTC-int LTR MaLR -293 1442 834 333 0 0 0 chr17 6743828 6743865 -78694615 + (CA)n Simple_repeat Simple_repeat 2 38 0 5287 205 92 106 chr17 6743865 6744504 -78693976 - MSTC-int LTR MaLR -901 834 230 2310 79 3 0 chr17 6744504 6744808 -78693672 - AluSg SINE Alu -5 305 1 5287 205 92 106 chr17 6744808 6745034 -78693446 - MSTC-int LTR MaLR -1505 230 2 933 135 88 31 chr17 6745044 6745237 -78693243 - MSTC LTR MaLR -4 424 221 281 140 0 53 chr17 6745383 6745440 -78693040 - MSTC LTR MaLR -250 178 125 647 165 108 19 chr17 6745440 6745598 -78692882 - MSTC LTR MaLR -256 172 1 2205 109 0 6 chr17 6745673 6745986 -78692494 + AluSq SINE Alu 1 311 -2 454 281 88 72 chr17 6746065 6746256 -78692224 - MIR SINE MIR -6 256 58 2115 95 0 0 chr17 6746256 6746570 -78691910 + AluSx SINE Alu 1 314 0 454 281 88 72 chr17 6746570 6746626 -78691854 - MIR SINE MIR -204 58 4 2457 43 27 0 chr17 6748821 6749122 -78689358 + AluSg SINE Alu 1 309 -1 2647 53 0 0 chr17 6749205 6749507 -78688973 + AluY SINE Alu 1 302 -9 273 230 206 40 chr17 6749524 6749650 -78688830 - MIR SINE MIR -93 169 23 * 440 319 80 5 chr17 6749638 6749826 -78688654 - MIR SINE MIR -38 224 23 328 294 39 10 chr17 6750690 6750792 -78687688 - MER91C DNA MER1_type -35 105 1 1394 39 0 0 chr17 6751084 6751239 -78687241 + AluY SINE Alu 147 301 -10 2190 80 0 104 chr17 6751921 6752259 -78686221 - AluSg SINE Alu -7 303 1 2453 92 0 0 chr17 6752666 6752972 -78685508 + AluSg SINE Alu 1 306 -4 2096 92 14 11 chr17 6756123 6756449 -78682031 + AluSx SINE Alu 1 327 0 699 243 26 30 chr17 6756589 6756856 -78681624 - LTR13 LTR ERVK -741 266 1 784 157 6 81 chr17 6756856 6757028 -78681452 + MIR SINE MIR 65 223 -39 2156 137 0 10 chr17 6757064 6757377 -78681103 - AluSx SINE Alu -2 310 1 2480 81 3 0 chr17 6757684 6757991 -78680489 + AluSp SINE Alu 1 308 -5 735 294 43 62 chr17 6758024 6758524 -78679956 - L2 LINE L2 0 3272 2778 2482 70 0 0 chr17 6758711 6759051 -78679429 - AluY SINE Alu 0 311 1 2383 86 3 0 chr17 6759617 6759908 -78678572 - AluSp SINE Alu -21 292 1 1412 122 0 0 chr17 6760416 6760605 -78677875 - AluSg/x SINE Alu -1 311 123 2382 84 0 0 chr17 6760846 6761157 -78677323 - AluSx SINE Alu 0 311 1 425 314 0 0 chr17 6761216 6761337 -78677143 - LTR67 LTR ERVL -8 549 429 239 266 0 16 chr17 6761505 6761569 -78676911 - LTR67 LTR ERVL -386 171 109 256 215 94 111 chr17 6761681 6761832 -78676648 - L1M4 LINE L1 -2976 3170 3024 1591 110 0 5 chr17 6761832 6762069 -78676411 + AluSq SINE Alu 78 313 0 256 215 94 111 chr17 6762069 6762214 -78676266 - L1M4 LINE L1 -3122 3024 2878 2318 95 0 3 chr17 6762621 6762915 -78675565 + AluSx SINE Alu 2 294 -18 224 280 53 27 chr17 6762983 6763058 -78675422 - MIR SINE MIR -137 125 49 494 122 52 17 chr17 6764346 6764518 -78673962 + (CA)n Simple_repeat Simple_repeat 2 179 0 1711 192 16 39 chr17 6765122 6765503 -78672977 - MLT1A2 LTR MaLR 0 374 3 2464 153 32 114 chr17 6765840 6766063 -78672417 - LTR9 LTR ERV1 -11 601 361 2316 75 4 0 chr17 6766063 6766372 -78672108 - AluSq SINE Alu 0 314 5 2464 153 32 114 chr17 6766372 6766802 -78671678 - LTR9 LTR ERV1 -251 361 1 864 88 0 0 chr17 6766952 6767065 -78671415 + AluSg/x SINE Alu 192 304 -5 3070 167 22 90 chr17 6767702 6768321 -78670159 + LTR8 LTR ERV1 1 661 -30 1204 170 83 104 chr17 6768321 6768781 -78669699 - LTR7 LTR ERV1 0 450 1 2240 100 0 7 chr17 6768781 6769072 -78669408 + AluSc SINE Alu 1 289 -20 3070 167 22 90 chr17 6769072 6769193 -78669287 + LTR8 LTR ERV1 659 691 0 1020 130 13 7 chr17 6769353 6769507 -78668973 + AluJo SINE Alu 12 166 -146 290 150 12 113 chr17 6769515 6769595 -78668885 - MER66A LTR ERV1 -12 466 395 2356 89 0 3 chr17 6769600 6769892 -78668588 + AluSx SINE Alu 15 305 -7 2565 62 0 7 chr17 6769892 6770201 -78668279 + AluSg SINE Alu 1 307 -3 2243 164 2 84 chr17 6770201 6770676 -78667804 - MER41B LTR ERV1 -68 567 132 868 132 0 23 chr17 6770697 6770855 -78667625 + AluJo SINE Alu 157 311 0 829 90 42 102 chr17 6771330 6771353 -78667127 + MER4A LTR ERV1 1 24 -640 1931 112 12 68 chr17 6771353 6771676 -78666804 + AluSx SINE Alu 1 305 -7 829 90 42 102 chr17 6771676 6771819 -78666661 + MER4A LTR ERV1 24 157 -507 * 1789 80 124 0 chr17 6771817 6772092 -78666388 + MER4A LTR ERV1 342 650 -14 2470 78 3 7 chr17 6772562 6772871 -78665609 - AluSx SINE Alu -4 308 1 2246 95 0 3 chr17 6773155 6773440 -78665040 - AluSg SINE Alu -24 286 3 2544 44 0 13 chr17 6774283 6774581 -78663899 + AluY SINE Alu 1 294 -17 1020 251 128 34 chr17 6774714 6775152 -78663328 + ERVL LTR ERVL 4320 4798 -966 1929 95 88 0 chr17 6775167 6775440 -78663040 - AluSg SINE Alu -13 297 1 827 280 37 8 chr17 6775474 6775717 -78662763 + ERVL LTR ERVL 4879 5128 -636 329 166 18 11 chr17 6775815 6775903 -78662577 - Alu SINE Alu -250 52 1 2440 98 3 9 chr17 6775934 6776249 -78662231 - AluSp SINE Alu 0 313 1 1596 179 34 0 chr17 6776324 6776586 -78661894 - AluJb SINE Alu -41 271 1 422 282 118 0 chr17 6776589 6776759 -78661721 - HAL1b LINE L1 -613 735 546 3588 145 7 16 chr17 6776764 6777015 -78661465 + L1MC2 LINE L1 5189 5441 -903 1402 184 63 19 chr17 6777015 6777323 -78661157 + AluJb SINE Alu 1 320 0 3588 145 7 16 chr17 6777323 6777777 -78660703 + L1MC2 LINE L1 5441 5891 -453 1312 118 0 0 chr17 6777778 6777956 -78660524 + AluSp SINE Alu 136 313 0 588 155 23 39 chr17 6777960 6778089 -78660391 + L1MC2 LINE L1 5880 6006 -338 408 305 53 64 chr17 6778110 6778387 -78660093 - HAL1b LINE L1 -840 508 235 700 176 0 37 chr17 6778387 6778523 -78659957 - FLAM_C SINE Alu -2 131 1 408 305 53 64 chr17 6778523 6778622 -78659858 - HAL1b LINE L1 -1113 235 136 2270 98 16 3 chr17 6778789 6779096 -78659384 - AluSp SINE Alu -2 311 1 2956 105 85 0 chr17 6779096 6779554 -78658926 - THE1B-int LTR MaLR -1083 497 1 2610 89 11 3 chr17 6779554 6779915 -78658565 - THE1B LTR MaLR 0 364 1 622 101 0 0 chr17 6779916 6780005 -78658475 + AluSg/x SINE Alu 215 303 -9 2291 112 0 0 chr17 6780617 6780920 -78657560 + AluSg SINE Alu 1 303 -7 2405 87 7 0 chr17 6780986 6781285 -78657195 + AluY SINE Alu 1 301 -10 395 106 15 0 chr17 6781648 6781714 -78656766 + (GA)n Simple_repeat Simple_repeat 2 68 0 2581 63 0 0 chr17 6782254 6782554 -78655926 + AluSc SINE Alu 1 300 -9 2828 115 0 58 chr17 6782782 6783172 -78655308 - L1PB3 LINE L1 -3 6151 5795 2329 117 3 0 chr17 6783172 6783479 -78655001 - AluSx SINE Alu 0 312 5 2828 115 0 58 chr17 6783479 6783592 -78654888 - L1PB3 LINE L1 -359 5795 5677 2505 83 3 3 chr17 6783592 6783905 -78654575 - AluSp SINE Alu 0 313 1 415 283 81 63 chr17 6784004 6784094 -78654386 - L1M4 LINE L1 -1310 4836 4749 4028 193 34 51 chr17 6784094 6785080 -78653400 + LTR5 LTR ERVK 1 969 0 415 283 81 63 chr17 6785080 6785344 -78653136 - L1M4 LINE L1 -1397 4749 4470 2508 43 26 10 chr17 6785344 6785648 -78652832 - AluY SINE Alu -2 309 1 415 283 81 63 chr17 6785648 6785734 -78652746 - L1M4 LINE L1 -1676 4470 4387 258 284 21 42 chr17 6785908 6786003 -78652477 + LTR16C LTR ERVL 96 188 -303 586 231 22 22 chr17 6786075 6786257 -78652223 + LTR16C LTR ERVL 310 491 0 2406 82 0 7 chr17 6786625 6786929 -78651551 + AluSx SINE Alu 1 302 -10 265 204 28 36 chr17 6787148 6787272 -78651208 - L1M LINE L1 -810 5336 5222 2177 119 24 3 chr17 6787288 6787583 -78650897 - AluJb SINE Alu -11 301 1 317 286 128 25 chr17 6787583 6787786 -78650694 - L1MC5 LINE L1 -470 7491 7268 2550 66 3 0 chr17 6787960 6788263 -78650217 - AluSg SINE Alu -6 304 1 294 314 85 8 chr17 6788321 6788439 -78650041 + MIR SINE MIR 130 256 -6 2180 112 3 3 chr17 6789506 6789800 -78648680 - AluSx SINE Alu -18 294 1 2464 67 0 3 chr17 6790435 6790735 -78647745 + AluY SINE Alu 1 299 -12 24 32 0 0 chr17 6790737 6790768 -78647712 + AT_rich Low_complexity Low_complexity 1 31 0 697 263 19 0 chr17 6790809 6790969 -78647511 + MIR SINE MIR 2 164 -98 1307 158 72 66 chr17 6790992 6791053 -78647427 + MLT1A1 LTR MaLR 1 60 -305 2534 73 0 7 chr17 6791053 6791355 -78647125 + AluSp SINE Alu 1 300 -13 1307 158 72 66 chr17 6791355 6791597 -78646883 + MLT1A1 LTR MaLR 60 306 -59 549 210 73 0 chr17 6791599 6791723 -78646757 - FLAM_C SINE Alu -10 133 1 341 191 15 0 chr17 6791724 6791792 -78646688 + MLT1A1 LTR MaLR 297 365 0 242 217 9 113 chr17 6791810 6791870 -78646610 + MIR SINE MIR 147 193 -69 2766 13 0 3 chr17 6791870 6792168 -78646312 - AluY SINE Alu -14 297 1 242 217 9 113 chr17 6792168 6792213 -78646267 + MIR SINE MIR 193 241 -21 2109 125 0 19 chr17 6792226 6792538 -78645942 - AluSg SINE Alu -4 306 1 709 179 0 15 chr17 6792538 6792672 -78645808 - AluJo SINE Alu -178 134 3 694 165 39 18 chr17 6792672 6792835 -78645645 - MLT1A1 LTR MaLR -207 167 1 * 868 316 88 10 chr17 6792835 6793242 -78645238 - MLT1L LTR MaLR -80 535 97 2285 92 10 3 chr17 6793356 6793659 -78644821 - AluSq SINE Alu -8 305 1 2024 78 4 0 chr17 6794589 6794834 -78643646 + AluY SINE Alu 1 246 -65 849 98 0 0 chr17 6794934 6795046 -78643434 - AluSg SINE Alu -198 112 1 4085 150 25 27 chr17 6795234 6796019 -78642461 + LTR1 LTR ERV1 1 784 -1 2169 85 6 63 chr17 6796073 6796404 -78642076 + AluSx SINE Alu 1 312 0 209 281 11 67 chr17 6796983 6797072 -78641408 + L2 LINE L2 2279 2362 -952 2466 96 3 0 chr17 6797103 6797415 -78641065 - AluSq SINE Alu 0 313 1 2250 80 0 40 chr17 6797603 6797905 -78640575 - AluSq SINE Alu -19 294 5 424 310 82 35 chr17 6797922 6798241 -78640239 + L2 LINE L2 2543 2876 -438 2550 91 0 0 chr17 6798967 6799276 -78639204 - AluSc SINE Alu 0 309 1 225 0 0 0 chr17 6799363 6799388 -78639092 + (A)n Simple_repeat Simple_repeat 1 25 0 598 293 35 20 chr17 6799388 6799586 -78638894 - MIR SINE MIR -38 224 24 422 273 115 34 chr17 6799753 6799962 -78638518 - L2 LINE L2 -5 3308 3083 2292 103 0 3 chr17 6800343 6800643 -78637837 - AluSx SINE Alu -13 299 1 5403 40 0 2 chr17 6801529 6802172 -78636308 - L1PA4 LINE L1 -3 6152 5511 8341 52 4 8 chr17 6802319 6803330 -78635150 - LTR13 LTR ERVK 0 1007 1 2319 93 7 0 chr17 6803565 6803856 -78634624 - AluSx SINE Alu -8 304 12 2090 48 0 24 chr17 6804008 6804258 -78634222 - AluY SINE Alu -17 294 51 553 41 0 41 chr17 6804258 6804331 -78634149 - AluY SINE Alu -164 147 78 655 165 10 0 chr17 6804543 6804646 -78633834 - AluJb SINE Alu -13 299 196 2099 108 11 7 chr17 6804650 6804937 -78633543 - AluSx SINE Alu -24 288 1 1720 176 78 22 chr17 6805457 6805983 -78632497 - MLT2A2 LTR ERVL 0 554 1 2208 111 3 0 chr17 6806477 6806775 -78631705 + AluSx SINE Alu 1 299 -13 282 263 5 88 chr17 6806930 6807135 -78631345 - HAL1 LINE L1 -310 2197 2010 256 216 189 0 chr17 6807340 6807414 -78631066 + LOR1a LTR ERV1 3 90 -407 2275 104 0 0 chr17 6807432 6807731 -78630749 - AluY SINE Alu -12 299 1 2376 94 3 0 chr17 6807863 6808161 -78630319 - AluSp SINE Alu -12 301 3 972 288 54 25 chr17 6808389 6808833 -78629647 - HAL1 LINE L1 -833 1674 1218 2494 83 0 3 chr17 6809254 6809566 -78628914 + AluSq SINE Alu 1 311 -2 527 295 90 18 chr17 6809810 6810173 -78628307 + L1M2 LINE L1 5262 5648 -643 588 111 0 0 chr17 6810175 6810265 -78628215 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 1054 149 12 6 chr17 6810273 6810441 -78628039 - FRAM SINE Alu -7 169 1 258 216 122 0 chr17 6810529 6810603 -78627877 + L1ME2 LINE L1 5729 5811 -1997 319 341 38 8 chr17 6810627 6810759 -78627721 + L1ME2 LINE L1 5811 5946 -218 1123 244 53 67 chr17 6810815 6811290 -78627190 - MLT1H LTR MaLR 0 549 82 2275 77 59 3 chr17 6811557 6811844 -78626636 + AluSq SINE Alu 1 303 -10 226 231 0 19 chr17 6812210 6812262 -78626218 - MER112 DNA MER1_type -6 254 204 307 247 148 0 chr17 6812342 6812423 -78626057 - L2 LINE L2 0 3313 3221 2478 78 7 0 chr17 6812828 6813137 -78625343 - AluSq SINE Alu -2 311 1 403 281 22 22 chr17 6813214 6813353 -78625127 + MIR SINE MIR 88 226 -36 207 171 0 0 chr17 6813668 6813703 -78624777 + GA-rich Low_complexity Low_complexity 2 36 0 241 120 53 13 chr17 6814396 6814471 -78624009 + (CCCCAG)n Simple_repeat Simple_repeat 6 83 0 438 159 40 23 chr17 6814899 6815075 -78623405 + (TG)n Simple_repeat Simple_repeat 2 180 0 663 116 56 0 chr17 6815094 6815432 -78623048 + (TG)n Simple_repeat Simple_repeat 1 357 0 1059 169 0 17 chr17 6815584 6815761 -78622719 - AluJo SINE Alu -55 257 84 238 343 40 0 chr17 6816084 6816183 -78622297 + L2 LINE L2 3146 3248 -24 425 246 217 11 chr17 6816448 6816623 -78621857 - L1MEc LINE L1 -5083 1313 1103 364 335 29 4 chr17 6816919 6817164 -78621316 - HAL1 LINE L1 -902 1605 1355 581 167 0 0 chr17 6817188 6817284 -78621196 + MSTB LTR MaLR 327 422 -4 4062 189 66 44 chr17 6817287 6818200 -78620280 - L1 LINE L1 -3752 3813 2921 1831 185 7 7 chr17 6818200 6818503 -78619977 + AluJb SINE Alu 2 304 -8 4062 189 66 44 chr17 6818503 6818659 -78619821 - L1 LINE L1 -4644 2921 2770 1622 138 120 22 chr17 6818659 6818934 -78619546 - AluSg SINE Alu -8 302 1 4062 189 66 44 chr17 6818934 6819242 -78619238 - L1 LINE L1 -4795 2770 2405 6538 222 16 7 chr17 6819268 6820596 -78617884 + L1PA13 LINE L1 1 1340 -5447 1595 219 20 122 chr17 6820597 6821195 -78617285 + L1ME1 LINE L1 5510 6046 -120 408 158 40 0 chr17 6821207 6821283 -78617197 + MLT1D LTR MaLR 28 106 -399 2218 102 7 3 chr17 6821292 6821595 -78616885 + AluSx SINE Alu 1 304 -8 1436 211 31 0 chr17 6821687 6821976 -78616504 + MLT2B3 LTR ERVL 210 507 -47 243 203 0 0 chr17 6821977 6822041 -78616439 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 255 118 0 0 chr17 6822046 6822093 -78616387 + MLT2B3 LTR ERVL 459 544 -10 481 284 109 40 chr17 6822274 6822590 -78615890 + L1MDa LINE L1 2365 2700 -3840 1947 88 0 16 chr17 6822627 6822877 -78615603 + AluSc SINE Alu 1 246 -63 481 123 32 52 chr17 6822978 6823133 -78615347 + C-rich Low_complexity Low_complexity 1 152 0 1528 151 14 76 chr17 6823146 6823437 -78615043 - AluJb SINE Alu -39 273 1 1466 205 57 40 chr17 6823437 6823494 -78614986 - L1MEc LINE L1 -5279 1117 1062 2548 71 0 0 chr17 6823494 6823804 -78614676 - AluY SINE Alu -1 310 1 1466 205 57 40 chr17 6823804 6824170 -78614310 - L1MEc LINE L1 -5334 1062 687 879 303 8 11 chr17 6824170 6824434 -78614046 - L1MEc LINE L1 -6054 342 80 625 287 28 17 chr17 6824491 6824672 -78613808 - MIR SINE MIR -50 212 30 194 104 0 62 chr17 6825308 6825356 -78613124 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 189 0 0 chr17 6825466 6825519 -78612961 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 179 26 26 chr17 6827360 6827477 -78611003 + (TG)n Simple_repeat Simple_repeat 1 117 0 416 131 51 23 chr17 6827536 6827711 -78610769 + (TG)n Simple_repeat Simple_repeat 1 180 0 187 91 61 45 chr17 6827701 6827767 -78610713 + (GTGTG)n Simple_repeat Simple_repeat 4 70 0 * 2310 88 0 3 chr17 6828275 6828572 -78609908 - AluY SINE Alu -15 296 1 325 215 0 0 chr17 6828716 6828781 -78609699 + MER116 DNA Mariner 16 80 0 391 320 59 40 chr17 6828790 6829012 -78609468 - L1M4 LINE L1 -3675 2471 2246 384 277 0 21 chr17 6829015 6829109 -78609371 - MER5B DNA MER1_type -1 177 86 407 42 0 0 chr17 6829110 6829158 -78609322 + AluY SINE Alu 2 49 -263 1464 171 0 13 chr17 6829258 6829497 -78608983 - AluSx SINE Alu -67 245 10 2358 95 0 3 chr17 6829910 6830205 -78608275 - AluSg SINE Alu -16 294 1 2248 118 3 0 chr17 6830226 6830530 -78607950 - AluSx SINE Alu -7 305 1 2377 99 3 0 chr17 6830530 6830831 -78607649 - AluSp SINE Alu -8 305 3 1317 19 0 0 chr17 6830964 6831118 -78607362 + L1PA4 LINE L1 6001 6154 -1 218 350 95 7 chr17 6832400 6832537 -78605943 + MIR SINE MIR 109 257 -5 2904 113 210 70 chr17 6833807 6834967 -78603513 + pTR5 LTR ERV1 743 2468 0 2258 106 0 0 chr17 6835249 6835541 -78602939 - AluSx SINE Alu -20 292 1 333 259 49 105 chr17 6835938 6836100 -78602380 + L1MC/D LINE L1 3808 3960 -2186 803 269 86 20 chr17 6836101 6836402 -78602078 - MLT1J LTR MaLR -148 363 43 2141 121 0 58 chr17 6836442 6836772 -78601708 - AluSx SINE Alu -1 311 1 1790 134 6 75 chr17 6836774 6837109 -78601371 - AluJb SINE Alu 0 312 1 832 215 49 0 chr17 6837109 6837272 -78601208 + MER58B DNA MER1_type 171 341 0 247 263 20 30 chr17 6837331 6837430 -78601050 + L1MC/D LINE L1 4101 4198 -1948 434 319 67 51 chr17 6837561 6837617 -78600863 + L1MC/D LINE L1 4557 4611 -1535 2151 124 3 0 chr17 6837617 6837908 -78600572 - AluSx SINE Alu -20 292 1 434 319 67 51 chr17 6837908 6838366 -78600114 + L1MC/D LINE L1 4611 5082 -1064 2273 112 3 0 chr17 6838366 6838671 -78599809 - AluSc SINE Alu -3 306 1 434 319 67 51 chr17 6838671 6838768 -78599712 + L1MC/D LINE L1 5082 5176 -970 608 211 181 20 chr17 6838768 6839189 -78599291 - LTR33 LTR ERVL 0 521 1 330 316 115 64 chr17 6839219 6839493 -78598987 + L1MC/D LINE L1 5306 5565 -2243 2384 88 0 0 chr17 6839493 6839787 -78598693 + AluSg SINE Alu 1 294 -16 330 316 115 64 chr17 6839787 6839798 -78598682 + L1MC/D LINE L1 5565 5574 -2234 2184 117 0 39 chr17 6839798 6840107 -78598373 + AluSq SINE Alu 1 297 -16 330 316 115 64 chr17 6840107 6840256 -78598224 + L1MC/D LINE L1 5574 5763 -2045 1306 133 20 5 chr17 6840298 6840494 -78597986 + AluSp SINE Alu 20 218 -95 227 287 0 52 chr17 6840833 6840969 -78597511 - L1MC/D LINE L1 -1923 5885 5757 1461 218 3 40 chr17 6841151 6841454 -78597026 + AluJo SINE Alu 1 292 -20 302 298 35 28 chr17 6841591 6841732 -78596748 - HAL1 LINE L1 -85 2422 2281 536 327 53 43 chr17 6841760 6842063 -78596417 - HAL1 LINE L1 -312 2195 1890 578 193 91 30 chr17 6842074 6842271 -78596209 - MER69 DNA AcHobo -10 2516 2308 320 214 0 0 chr17 6842281 6842337 -78596143 - L1MC4 LINE L1 -1339 6703 6648 1454 145 0 0 chr17 6842338 6842538 -78595942 - AluJo SINE Alu -13 299 100 447 134 0 0 chr17 6842589 6842656 -78595824 - AluJ/FLAM SINE Alu -224 88 22 327 248 138 18 chr17 6842664 6842773 -78595707 + MER50 LTR ERV1 10 131 -603 2114 93 0 4 chr17 6842774 6843044 -78595436 - AluSg1 SINE Alu -40 269 1 3334 170 7 38 chr17 6843045 6843621 -78594859 - L1MD2 LINE L1 -465 6288 5732 2196 89 7 0 chr17 6843621 6843924 -78594556 - AluSx SINE Alu 0 307 3 3334 170 7 38 chr17 6843924 6844073 -78594407 - L1MD2 LINE L1 -1021 5732 5580 2382 98 0 0 chr17 6844374 6844680 -78593800 - AluSx SINE Alu -6 306 1 286 301 44 0 chr17 6845459 6845596 -78592884 - LTR16A1 LTR ERVL -10 481 305 363 252 50 8 chr17 6845669 6845788 -78592692 - LTR16C LTR ERVL -164 327 204 2357 74 20 0 chr17 6845886 6846185 -78592295 + AluY SINE Alu 1 305 -6 3359 234 18 32 chr17 6846310 6846837 -78591643 - L1MD2 LINE L1 -2138 4402 3869 1583 133 20 119 chr17 6846837 6847182 -78591298 - AluJb SINE Alu -1 311 1 3359 234 18 32 chr17 6847182 6847211 -78591269 - L1MD2 LINE L1 -2671 3869 3841 2146 90 11 4 chr17 6847211 6847530 -78590950 - AluY SINE Alu 0 321 1 3359 234 18 32 chr17 6847530 6847706 -78590774 - L1MD2 LINE L1 -2699 3841 3664 4230 170 40 51 chr17 6847706 6848670 -78589810 + LTR13 LTR ERVK 1 954 0 3359 234 18 32 chr17 6848670 6848966 -78589514 - L1MD2 LINE L1 -2876 3664 3385 2000 124 60 0 chr17 6848966 6849248 -78589232 + AluSx SINE Alu 1 299 -13 1094 217 49 80 chr17 6849248 6849451 -78589029 - L1MD2 LINE L1 -5027 1516 1308 1835 163 0 40 chr17 6849451 6849776 -78588704 - AluJb SINE Alu 0 312 1 1094 217 49 80 chr17 6849776 6850014 -78588466 - L1MD2 LINE L1 -5235 1308 1064 205 40 0 0 chr17 6850014 6850039 -78588441 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1720 112 123 8 chr17 6850039 6850290 -78588190 - AluSg1 SINE Alu -29 280 1 1094 217 49 80 chr17 6850290 6850347 -78588133 - L1MD2 LINE L1 -5477 1066 1001 1296 161 39 84 chr17 6850360 6850535 -78587945 - LTR5 LTR ERVK 0 969 788 304 28 0 0 chr17 6850535 6850571 -78587909 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2263 54 18 4 chr17 6850571 6850849 -78587631 - AluY SINE Alu -1 317 1 4486 159 32 37 chr17 6850849 6851661 -78586819 - LTR5 LTR ERVK -161 808 1 1296 161 39 84 chr17 6850849 6850982 -78587498 - LTR5 LTR ERVK -179 790 674 325 288 8 8 chr17 6851665 6851783 -78586697 - L1MD2 LINE L1 -5511 1032 915 208 233 0 0 chr17 6852250 6852267 -78586213 + A-rich Low_complexity Low_complexity 4 20 -26 2378 94 7 0 chr17 6852267 6852574 -78585906 + AluSc SINE Alu 1 309 0 208 233 0 0 chr17 6852574 6852599 -78585881 + A-rich Low_complexity Low_complexity 19 46 0 307 394 49 39 chr17 6852664 6852948 -78585532 - L1MD2 LINE L1 -6234 306 20 1250 258 92 32 chr17 6852949 6853150 -78585330 + L1M4 LINE L1 2748 2935 -3211 2485 65 0 10 chr17 6853150 6853459 -78585021 + AluY SINE Alu 1 306 -5 1250 258 92 32 chr17 6853459 6853745 -78584735 + L1M4 LINE L1 2935 3202 -2944 1969 157 7 10 chr17 6853745 6853879 -78584601 + AluSx SINE Alu 1 134 -178 2387 57 47 0 chr17 6853879 6854175 -78584305 + AluY SINE Alu 1 310 -1 1969 157 7 10 chr17 6854175 6854340 -78584140 + AluSx SINE Alu 134 299 -13 1250 258 92 32 chr17 6854340 6854379 -78584101 + L1M4 LINE L1 3202 3237 -2909 2532 60 3 19 chr17 6854379 6854694 -78583786 + AluY SINE Alu 1 310 -1 1250 258 92 32 chr17 6854694 6854945 -78583535 + L1M4 LINE L1 3237 3574 -2572 284 155 357 0 chr17 6854939 6855068 -78583412 + L1M4 LINE L1 4878 5052 -1094 * 1210 176 14 5 chr17 6855068 6855278 -78583202 + AluJo SINE Alu 1 212 -100 250 306 72 0 chr17 6855285 6855396 -78583084 - L1M4 LINE L1 -1898 4248 4130 1175 246 81 48 chr17 6855887 6856427 -78582053 + L2 LINE L2 2473 3069 -244 2816 109 23 32 chr17 6856427 6856605 -78581875 + MSTA LTR MaLR 1 179 -249 2493 72 7 0 chr17 6856605 6856909 -78581571 - AluY SINE Alu -5 306 1 2816 109 23 32 chr17 6856909 6857162 -78581318 + MSTA LTR MaLR 179 428 0 1175 246 81 48 chr17 6857162 6857416 -78581064 + L2 LINE L2 3069 3313 0 3859 48 13 0 chr17 6857434 6857908 -78580572 + L1PA8 LINE L1 5691 6170 -2 248 294 22 0 chr17 6857946 6858038 -78580442 + L1MC4a LINE L1 4498 4591 -1555 261 333 152 0 chr17 6858246 6858411 -78580069 + LTR16A LTR ERVL 261 450 0 2186 103 33 0 chr17 6858463 6858765 -78579715 + AluSx SINE Alu 1 312 0 310 298 90 75 chr17 6858765 6858953 -78579527 + L1MC4a LINE L1 5719 5909 -1899 783 176 0 0 chr17 6860163 6860305 -78578175 + AluSp/q SINE Alu 172 313 0 1749 142 14 17 chr17 6860409 6860698 -78577782 - AluSx SINE Alu -21 291 4 258 398 6 0 chr17 6860708 6860869 -78577611 + (CCCCAA)n Simple_repeat Simple_repeat 2 163 0 223 369 23 17 chr17 6860948 6861124 -78577356 + (CCCCAA)n Simple_repeat Simple_repeat 1 177 0 221 209 76 51 chr17 6862700 6862858 -78575622 + (ATGGTG)n Simple_repeat Simple_repeat 3 164 0 580 311 47 0 chr17 6862861 6863073 -78575407 + MIR SINE MIR 12 233 -29 2380 83 6 10 chr17 6863493 6863805 -78574675 + AluSq SINE Alu 1 311 -2 541 231 125 25 chr17 6864416 6864576 -78573904 - MER5B DNA MER1_type -1 177 2 292 263 56 44 chr17 6865240 6865261 -78573219 - L1MA10 LINE L1 -2 6332 6312 597 243 30 82 chr17 6865261 6865528 -78572952 - L1ME2 LINE L1 -13 6151 5899 1423 227 101 55 chr17 6865799 6866324 -78572156 - MLT1H LTR MaLR 0 549 1 2318 95 3 3 chr17 6866346 6866652 -78571828 - AluSp SINE Alu -7 306 1 865 213 14 36 chr17 6866765 6866986 -78571494 - L2 LINE L2 -793 2521 2306 1897 161 11 0 chr17 6867131 6867410 -78571070 - AluJo SINE Alu -30 282 1 462 262 76 0 chr17 6867411 6867556 -78570924 - LTR33 LTR ERVL -40 481 326 272 324 11 45 chr17 6867948 6868124 -78570356 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 244 370 6 6 chr17 6868184 6868346 -78570134 + (CCCCAA)n Simple_repeat Simple_repeat 4 165 0 1161 52 8 0 chr17 6868497 6868631 -78569849 + AluSq/x SINE Alu 1 135 -178 2369 101 3 3 chr17 6868632 6868940 -78569540 + AluSc SINE Alu 1 308 -1 698 265 105 13 chr17 6869074 6869387 -78569093 - MER115 DNA AcHobo -313 380 39 906 47 0 58 chr17 6869428 6869599 -78568881 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 2128 95 29 0 chr17 6869601 6869874 -78568606 - AluSp SINE Alu -32 281 1 2400 146 57 5 chr17 6870752 6871157 -78567323 + MSTA LTR MaLR 1 426 -2 9531 164 20 4 chr17 6871160 6872779 -78565701 + MSTA-int LTR MaLR 7 1651 0 2437 125 62 34 chr17 6872779 6872966 -78565514 + MSTA LTR MaLR 1 181 -247 2096 138 0 3 chr17 6872966 6873262 -78565218 - AluSg SINE Alu -15 295 1 2437 125 62 34 chr17 6873262 6873490 -78564990 + MSTA LTR MaLR 181 428 0 543 337 25 10 chr17 6873627 6873826 -78564654 + MIR SINE MIR 32 233 -29 307 73 0 0 chr17 6875102 6875143 -78563337 + L1MA9 LINE L1 5910 5950 -362 2392 97 0 0 chr17 6875143 6875441 -78563039 + AluSg SINE Alu 1 298 -12 1106 78 0 0 chr17 6877222 6877363 -78561117 - AluSp/q SINE Alu -2 311 171 2192 108 0 7 chr17 6877365 6877661 -78560819 - AluSx SINE Alu -18 294 1 1248 192 0 5 chr17 6877745 6877964 -78560516 - AluJo SINE Alu -11 301 84 2465 67 7 0 chr17 6878271 6878570 -78559910 + AluSx SINE Alu 1 301 -11 876 159 62 40 chr17 6878660 6878836 -78559644 + MLT1C LTR MaLR 38 217 -250 1851 105 6 125 chr17 6878837 6879180 -78559300 + AluSx SINE Alu 1 302 0 2180 78 0 7 chr17 6880027 6880297 -78558183 - AluSc SINE Alu -41 268 1 364 253 95 56 chr17 6880467 6880729 -78557751 + MLT1J2 LTR MaLR 163 443 -7 315 317 56 21 chr17 6880908 6881050 -78557430 - L2 LINE L2 -1252 2062 1916 246 250 37 81 chr17 6881468 6881533 -78556947 - L1M LINE L1 -790 5390 5333 2233 107 0 20 chr17 6881533 6881832 -78556648 - AluSc SINE Alu -16 293 1 246 250 37 81 chr17 6881832 6881902 -78556578 - L1M LINE L1 -847 5333 5261 302 223 122 47 chr17 6881902 6882050 -78556430 - L1MEc LINE L1 -4807 1589 1431 236 347 42 21 chr17 6882747 6882842 -78555638 - MER91C DNA MER1_type -30 110 14 2319 121 0 13 chr17 6883230 6883544 -78554936 + AluSq SINE Alu 2 311 -2 2349 100 3 0 chr17 6883663 6883963 -78554517 - AluSx SINE Alu -11 301 1 2148 43 90 14 chr17 6884087 6884365 -78554115 - AluY SINE Alu -12 299 1 290 256 44 80 chr17 6885035 6885114 -78553366 + MIR SINE MIR 103 176 -86 2199 109 3 3 chr17 6885114 6885407 -78553073 - AluSq SINE Alu -18 295 3 290 256 44 80 chr17 6885407 6885464 -78553016 + MIR SINE MIR 176 234 -28 1496 290 100 19 chr17 6888341 6889092 -78549388 + L2 LINE L2 1562 2373 -941 189 195 0 0 chr17 6889365 6889406 -78549074 + (TG)n Simple_repeat Simple_repeat 2 42 0 1000 147 26 103 chr17 6890446 6890678 -78547802 + MER20 DNA MER1_type 6 219 0 2243 91 7 17 chr17 6893384 6893680 -78544800 - AluSx SINE Alu -16 296 4 228 191 0 21 chr17 6894390 6894437 -78544043 + MLT1K LTR MaLR 509 554 -34 528 243 53 32 chr17 6895572 6895761 -78542719 - LTR33 LTR ERVL -2 519 327 10184 144 35 39 chr17 6895857 6896831 -78541649 + L1MA3 LINE L1 2191 3168 -4397 1668 56 0 95 chr17 6896831 6897062 -78541418 - AluSc SINE Alu -100 209 1 10184 144 35 39 chr17 6897062 6899787 -78538693 + L1MA3 LINE L1 3168 5855 -1710 14253 34 5 11 chr17 6899788 6902908 -78535572 + L1PA4 LINE L1 3046 6154 -1 22 35 0 0 chr17 6902952 6902981 -78535499 + AT_rich Low_complexity Low_complexity 1 29 0 5219 123 21 25 chr17 6903107 6903288 -78535192 + L1MA3 LINE L1 5896 6076 -1648 444 19 0 0 chr17 6903288 6903341 -78535139 + (CA)n Simple_repeat Simple_repeat 2 54 0 5219 123 21 25 chr17 6903341 6904751 -78533729 + L1MA3 LINE L1 6076 7478 -246 3681 114 6 4 chr17 6904751 6905261 -78533219 + MER9 LTR ERVK 1 511 0 32807 58 19 18 chr17 6905261 6906018 -78532462 + HERVK9 LTR ERVK 1 755 -5161 187 233 0 83 chr17 6906018 6906078 -78532402 + MER5B DNA MER1_type 55 109 -69 32807 58 19 18 chr17 6906078 6909421 -78529059 + HERVK9 LTR ERVK 755 4166 -1750 6561 70 21 1 chr17 6909417 6910243 -78528237 + HERVK9 LTR ERVK 4793 5634 -282 * 2342 105 17 12 chr17 6910268 6910620 -78527860 + HERVK9 LTR ERVK 4936 5916 0 3817 93 0 10 chr17 6910620 6911136 -78527344 + MER9 LTR ERVK 1 511 0 1538 88 20 36 chr17 6911136 6911386 -78527094 + L1MA2 LINE L1 6057 6302 -2 555 329 44 16 chr17 6911582 6911831 -78526649 + MIR SINE MIR 7 262 0 402 57 0 0 chr17 6912003 6912056 -78526424 + (T)n Simple_repeat Simple_repeat 1 53 0 978 148 216 26 chr17 6912296 6912689 -78525791 + MER51A LTR ERV1 1 633 -1 1223 152 186 26 chr17 6912690 6912954 -78525526 + MER51A-int LTR ERV1 1 306 -7510 262 270 0 0 chr17 6913216 6913290 -78525190 + MER51A-int LTR ERV1 976 1049 -5480 1406 276 59 71 chr17 6913673 6914701 -78523779 + MER51A-int LTR ERV1 4779 5805 -1951 2487 44 0 0 chr17 6914754 6915052 -78523428 - AluY SINE Alu -13 298 1 1946 99 4 4 chr17 6915052 6915324 -78523156 - AluSp SINE Alu -19 294 23 363 303 47 38 chr17 6915530 6915741 -78522739 + MER51A-int LTR ERV1 4654 4866 -1810 225 0 0 0 chr17 6915812 6915837 -78522643 + (T)n Simple_repeat Simple_repeat 1 25 0 1791 186 58 0 chr17 6915909 6916221 -78522259 + MER51A-int LTR ERV1 7487 7816 0 820 128 195 46 chr17 6916223 6916418 -78522062 + MER51A LTR ERV1 1 224 -410 * 1175 128 78 25 chr17 6916415 6916619 -78521861 + MER51A LTR ERV1 420 634 0 353 224 56 37 chr17 6916620 6916727 -78521753 - L1M4 LINE L1 -1276 4870 4762 515 290 52 8 chr17 6916743 6916995 -78521485 - L1ME LINE L1 -3322 2758 2496 594 272 46 57 chr17 6916996 6917367 -78521113 - L1ME LINE L1 -5703 367 1 1357 125 0 42 chr17 6917549 6917606 -78520874 + L1PA15 LINE L1 5444 5502 -663 2298 53 0 7 chr17 6917606 6917922 -78520558 + AluY SINE Alu 1 314 0 1357 125 0 42 chr17 6917922 6918079 -78520401 + L1PA15 LINE L1 5502 5650 -515 2574 109 6 3 chr17 6918089 6918436 -78520044 - THE1B LTR MaLR -16 348 1 3590 116 4 0 chr17 6918436 6918952 -78519528 + L1PA15 LINE L1 5646 6163 -2 4272 144 57 54 chr17 6919168 6919461 -78519019 - L1MB5 LINE L1 0 6174 5883 207 0 0 0 chr17 6919461 6919484 -78518996 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2115 99 0 0 chr17 6919484 6919766 -78518714 - AluSg SINE Alu -28 282 1 4272 144 57 54 chr17 6919766 6920359 -78518121 - L1MB5 LINE L1 -290 5884 5284 266 295 115 105 chr17 6920471 6920656 -78517824 - MLT1K LTR MaLR -129 459 277 1048 65 0 7 chr17 6920656 6920794 -78517686 + L1PA7 LINE L1 6011 6147 -7 1762 166 0 23 chr17 6920798 6920970 -78517510 - AluJo SINE Alu -7 305 142 2088 60 4 4 chr17 6920970 6921235 -78517245 - AluY SINE Alu -5 306 42 1762 166 0 23 chr17 6921235 6921370 -78517110 - AluJo SINE Alu -170 142 5 266 295 115 105 chr17 6921370 6921569 -78516911 - MLT1K LTR MaLR -313 275 66 5539 155 31 21 chr17 6922341 6924132 -78514348 - L1MA4 LINE L1 -11 6289 4464 298 193 0 0 chr17 6924574 6924631 -78513849 - MLT1K LTR MaLR -8 580 524 4671 171 9 38 chr17 6925885 6926645 -78511835 - L1P LINE L1 -782 5364 4658 1981 138 0 3 chr17 6926645 6926950 -78511530 - AluSx SINE Alu -8 304 1 4671 171 9 38 chr17 6926950 6927203 -78511277 - L1P LINE L1 -1488 4658 4399 1628 173 68 0 chr17 6927190 6927526 -78510954 - L1MA4 LINE L1 -1983 4163 3805 * 4939 155 16 39 chr17 6927525 6928012 -78510468 + L1MA7 LINE L1 5341 5797 -494 2241 106 0 0 chr17 6928012 6928323 -78510157 + AluSx SINE Alu 1 311 -1 4939 155 16 39 chr17 6928323 6928807 -78509673 + L1MA7 LINE L1 5797 6290 -1 805 179 0 15 chr17 6928965 6929099 -78509381 + AluSq/x SINE Alu 4 135 -178 1862 124 3 28 chr17 6929099 6929185 -78509295 + AluSg SINE Alu 1 88 -223 6877 62 27 25 chr17 6929185 6930080 -78508400 + MER11D LTR ERVK 1 897 0 1862 124 3 28 chr17 6930080 6930311 -78508169 + AluSg SINE Alu 88 311 0 917 211 0 12 chr17 6930313 6930479 -78508001 + FRAM SINE Alu 1 164 -2 979 261 67 46 chr17 6930515 6930605 -78507875 - L1M4 LINE L1 -3382 2764 2677 656 224 0 8 chr17 6930605 6930730 -78507750 + FLAM_A SINE Alu 2 125 -8 979 261 67 46 chr17 6930730 6931058 -78507422 - L1M4 LINE L1 -3469 2677 2326 2162 99 0 16 chr17 6931058 6931371 -78507109 + AluSg1 SINE Alu 1 308 -1 979 261 67 46 chr17 6931371 6931564 -78506916 - L1M4 LINE L1 -3820 2326 2139 554 113 0 0 chr17 6931954 6932034 -78506446 + AluSg/x SINE Alu 218 297 -13 810 136 0 0 chr17 6933172 6933290 -78505190 - AluJo SINE Alu -108 204 87 1082 119 85 0 chr17 6933291 6933468 -78505012 - MER46B DNA MER2_type -169 67 1 1677 154 73 20 chr17 6933683 6933784 -78504696 - L1MB3 LINE L1 -7 6176 6082 2316 68 0 13 chr17 6933784 6934093 -78504387 - AluSc SINE Alu -4 305 1 1677 154 73 20 chr17 6934093 6934335 -78504145 - L1MB3 LINE L1 -101 6082 5815 630 128 11 0 chr17 6934337 6934431 -78504049 - AluJo/FRAM SINE Alu -25 287 193 2041 81 0 28 chr17 6934433 6934716 -78503764 - AluSq SINE Alu -38 275 1 695 188 0 7 chr17 6934720 6934858 -78503622 - L1PB4 LINE L1 0 6156 6020 357 213 22 4 chr17 6935087 6935322 -78503158 + (CA)n Simple_repeat Simple_repeat 1 239 0 452 261 6 6 chr17 6935333 6935513 -78502967 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 227 8 0 chr17 6935559 6935687 -78502793 + (CA)n Simple_repeat Simple_repeat 1 129 0 334 237 0 48 chr17 6935700 6935833 -78502647 + (CTCA)n Simple_repeat Simple_repeat 4 127 -53 219 103 0 0 chr17 6935833 6935872 -78502608 + (CA)n Simple_repeat Simple_repeat 1 39 0 334 237 0 48 chr17 6935872 6935924 -78502556 + (CTCA)n Simple_repeat Simple_repeat 127 180 0 * 393 273 12 0 chr17 6935915 6936295 -78502185 + (CA)n Simple_repeat Simple_repeat 1 384 0 339 208 0 0 chr17 6936316 6936441 -78502039 + (CA)n Simple_repeat Simple_repeat 1 125 0 284 0 28 0 chr17 6936560 6936596 -78501884 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 265 233 17 0 chr17 6938189 6938249 -78500231 + (CTGGGG)n Simple_repeat Simple_repeat 5 65 0 2026 112 7 3 chr17 6938348 6938653 -78499827 - AluSx SINE Alu -2 310 5 433 289 16 0 chr17 6939594 6939715 -78498765 - MIR SINE MIR -118 144 22 2216 89 3 0 chr17 6939894 6940214 -78498266 + AluSx SINE Alu 1 321 0 2351 86 0 0 chr17 6940219 6940520 -78497960 + AluSq SINE Alu 1 301 -12 2168 94 3 0 chr17 6940852 6941149 -78497331 + AluSq SINE Alu 1 298 -15 508 302 16 16 chr17 6941149 6941341 -78497139 + L1ME3A LINE L1 5974 6165 -5 654 198 0 9 chr17 6941443 6941589 -78496891 - FLAM_A SINE Alu 0 145 1 1461 130 153 11 chr17 6941802 6942063 -78496417 + AluJo SINE Alu 1 298 -4 2149 97 0 13 chr17 6942094 6942394 -78496086 + AluSg1 SINE Alu 1 296 -13 2271 71 0 34 chr17 6942484 6942806 -78495674 + AluY SINE Alu 1 311 0 1731 159 0 3 chr17 6942812 6943095 -78495385 + AluSx SINE Alu 1 282 -30 1023 54 0 0 chr17 6943098 6943264 -78495216 + AluSc SINE Alu 152 317 0 2003 107 3 7 chr17 6943936 6944234 -78494246 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr17 6944237 6944282 -78494198 + (TA)n Simple_repeat Simple_repeat 2 46 0 333 308 75 15 chr17 6944503 6944636 -78493844 + MIR SINE MIR 116 256 -6 2085 84 0 24 chr17 6945477 6945773 -78492707 - AluSg SINE Alu -21 289 1 559 256 98 6 chr17 6945881 6946045 -78492435 - MIR SINE MIR 0 262 84 389 290 233 40 chr17 6946220 6946624 -78491856 + L2 LINE L2 2827 3308 -5 2042 72 7 31 chr17 6946893 6947218 -78491262 + AluSq SINE Alu 1 318 0 2138 113 0 3 chr17 6947426 6947726 -78490754 + AluSq SINE Alu 1 299 -14 285 276 31 10 chr17 6947736 6947834 -78490646 - MER5B DNA MER1_type 0 178 79 2092 111 3 0 chr17 6948466 6948764 -78489716 + AluSq SINE Alu 1 299 -14 2197 98 3 0 chr17 6948846 6949153 -78489327 + AluSg SINE Alu 1 308 -2 235 209 0 0 chr17 6950510 6950553 -78487927 + MER91A DNA MER1_type 119 161 -35 1167 81 6 0 chr17 6950599 6950760 -78487720 - AluSq SINE Alu -4 309 148 266 62 0 0 chr17 6950760 6950792 -78487688 - Alu SINE Alu -266 37 6 388 241 11 59 chr17 6952007 6952194 -78486286 + GA-rich Low_complexity Low_complexity 2 179 0 290 256 0 80 chr17 6952384 6952560 -78485920 + GA-rich Low_complexity Low_complexity 5 166 0 2151 83 40 7 chr17 6954385 6954686 -78483794 + AluY SINE Alu 1 311 0 351 308 53 57 chr17 6955022 6955285 -78483195 - L2 LINE L2 -831 2483 2222 428 214 22 160 chr17 6956992 6957126 -78481354 - L1MC5 LINE L1 -428 7533 7467 1975 105 40 17 chr17 6957126 6957422 -78481058 - AluSx SINE Alu -9 303 1 428 214 22 160 chr17 6957422 6957605 -78480875 - L1MC5 LINE L1 -494 7467 7260 235 248 168 30 chr17 6957738 6957839 -78480641 - L1MC5 LINE L1 -741 7220 7106 2144 120 3 0 chr17 6957839 6958139 -78480341 + AluSx SINE Alu 1 301 -11 1228 126 12 89 chr17 6958144 6958206 -78480274 + AluSg/x SINE Alu 83 148 -162 2279 87 0 3 chr17 6958206 6958504 -78479976 + AluSg1 SINE Alu 1 297 -12 1228 126 12 89 chr17 6958504 6958688 -78479792 + AluSg/x SINE Alu 148 310 0 559 197 108 100 chr17 6958700 6958829 -78479651 - L1MC5 LINE L1 -861 7100 6973 2254 107 0 3 chr17 6958829 6959139 -78479341 - AluSq SINE Alu -4 309 1 559 197 108 100 chr17 6959139 6959335 -78479145 - L1MC5 LINE L1 -988 6973 6769 2490 58 0 6 chr17 6959335 6959648 -78478832 + AluY SINE Alu 1 311 0 559 197 108 100 chr17 6959648 6959711 -78478769 - L1MC5 LINE L1 -1192 6769 6708 780 320 62 52 chr17 6959715 6960177 -78478303 - L1M4 LINE L1 -1369 4777 4321 2355 87 3 10 chr17 6960177 6960488 -78477992 - AluSp SINE Alu -4 309 1 2192 99 0 13 chr17 6960490 6960804 -78477676 - AluSx SINE Alu -2 310 1 780 320 62 52 chr17 6960804 6960968 -78477512 - L1M4 LINE L1 -1825 4321 4160 814 254 78 10 chr17 6960968 6961173 -78477307 + MER20 DNA MER1_type 1 219 0 780 320 62 52 chr17 6961173 6961239 -78477241 - L1M4 LINE L1 -1986 4160 4096 2290 103 0 0 chr17 6961239 6961551 -78476929 + AluSq SINE Alu 1 312 -1 780 320 62 52 chr17 6961551 6961743 -78476737 - L1M4 LINE L1 -2050 4096 3879 1400 149 65 19 chr17 6961743 6962004 -78476476 - AluJo SINE Alu -39 273 1 393 356 115 0 chr17 6962016 6962328 -78476152 - L1M4 LINE L1 -2277 3869 3522 210 258 0 0 chr17 6964050 6964112 -78474368 + (CA)n Simple_repeat Simple_repeat 1 62 0 289 256 0 58 chr17 6965337 6965493 -78472987 + C-rich Low_complexity Low_complexity 4 150 0 1020 141 39 0 chr17 6965677 6965833 -78472647 - FRAM SINE Alu -16 160 1 253 352 6 22 chr17 6966654 6966833 -78471647 + GA-rich Low_complexity Low_complexity 2 177 0 207 0 0 0 chr17 6966932 6966955 -78471525 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 482 186 0 28 chr17 6967267 6967412 -78471068 + (CA)n Simple_repeat Simple_repeat 2 142 0 1753 134 7 22 chr17 6969091 6969366 -78469114 + AluJb SINE Alu 25 295 -17 1729 113 32 0 chr17 6969395 6969642 -78468838 + AluSx SINE Alu 46 300 -12 262 214 0 57 chr17 6971283 6971419 -78467061 + G-rich Low_complexity Low_complexity 1 128 0 492 165 0 0 chr17 6972245 6972324 -78466156 + FLAM SINE Alu 50 128 -15 2092 105 0 0 chr17 6972328 6972613 -78465867 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr17 6972613 6972634 -78465846 + AT_rich Low_complexity Low_complexity 1 21 0 2228 99 0 6 chr17 6972656 6972969 -78465511 - AluSx SINE Alu 0 312 2 249 288 0 0 chr17 6974427 6974486 -78463994 + L2 LINE L2 3252 3310 -3 189 187 40 13 chr17 6976842 6976917 -78461563 + G-rich Low_complexity Low_complexity 2 78 0 209 192 0 19 chr17 6977177 6977229 -78461251 + GA-rich Low_complexity Low_complexity 3 53 0 224 398 16 8 chr17 6977946 6978069 -78460411 + L3 LINE CR1 1448 1571 -6 21 36 0 0 chr17 6979734 6979762 -78458718 + GC_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 6984175 6984197 -78454283 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 569 222 74 37 chr17 6986381 6986570 -78451910 - MER91A DNA MER1_type 0 196 1 371 261 96 0 chr17 6987776 6987891 -78450589 + L1ME3 LINE L1 5837 5962 -208 303 235 0 121 chr17 6987925 6988091 -78450389 + L1ME3 LINE L1 5940 6085 -77 2054 118 0 3 chr17 6988153 6988450 -78450030 - AluSx SINE Alu -16 296 1 2071 92 64 0 chr17 6990750 6991032 -78447448 + AluSq SINE Alu 1 300 -13 2196 116 10 0 chr17 6991146 6991448 -78447032 + AluSx SINE Alu 1 305 -7 252 346 48 0 chr17 6992139 6992243 -78446237 - MIR SINE MIR -107 155 47 2446 55 7 3 chr17 6992373 6992683 -78445797 + AluY SINE Alu 1 311 0 2158 60 0 18 chr17 6993028 6993313 -78445167 - AluY SINE Alu -13 298 19 24 0 0 0 chr17 6994002 6994026 -78444454 + GC_rich Low_complexity Low_complexity 1 24 0 243 146 0 0 chr17 6995728 6995769 -78442711 + (TTC)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 6997479 6997500 -78440980 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 6997565 6997602 -78440878 + GC_rich Low_complexity Low_complexity 1 37 0 236 326 11 33 chr17 6997859 6998040 -78440440 + C-rich Low_complexity Low_complexity 2 178 0 25 31 0 0 chr17 6999045 6999077 -78439403 + GC_rich Low_complexity Low_complexity 1 32 0 294 98 33 16 chr17 6999082 6999143 -78439337 + CT-rich Low_complexity Low_complexity 1 62 0 2003 125 7 10 chr17 7004455 7004590 -78433890 + AluJo SINE Alu 1 135 -177 2217 108 0 3 chr17 7004590 7004895 -78433585 + AluSg SINE Alu 1 304 -6 2003 125 7 10 chr17 7004895 7005062 -78433418 + AluJo SINE Alu 135 302 -10 2311 87 0 3 chr17 7005067 7005377 -78433103 - AluSg SINE Alu -1 309 1 21 36 0 0 chr17 7005377 7005405 -78433075 + AT_rich Low_complexity Low_complexity 1 28 0 256 297 103 32 chr17 7006980 7007037 -78431443 - MIR SINE MIR 0 262 210 2195 112 0 0 chr17 7007037 7007340 -78431140 - AluSg SINE Alu -1 309 7 256 297 103 32 chr17 7007340 7007437 -78431043 - MIR SINE MIR -52 210 97 328 267 100 0 chr17 7007439 7007559 -78430921 + L2 LINE L2 3174 3305 -8 2395 81 0 0 chr17 7007560 7007867 -78430613 + AluSc SINE Alu 1 307 -2 2274 98 3 3 chr17 7007930 7008236 -78430244 - AluSg SINE Alu -4 306 1 2009 104 35 3 chr17 7009215 7009504 -78428976 + AluSx SINE Alu 1 298 -14 40 67 0 0 chr17 7010884 7010959 -78427521 + GC_rich Low_complexity Low_complexity 1 75 0 296 277 0 50 chr17 7011183 7011284 -78427196 + G-rich Low_complexity Low_complexity 3 98 0 196 321 0 0 chr17 7012647 7012703 -78425777 + L2 LINE L2 3258 3313 0 182 167 0 24 chr17 7012796 7012838 -78425642 - L2 LINE L2 -665 2649 2609 294 331 60 23 chr17 7012849 7012982 -78425498 - L2 LINE L2 -1 3312 3175 2381 64 7 3 chr17 7013293 7013591 -78424889 + AluSp SINE Alu 1 299 -14 352 296 301 10 chr17 7013826 7014022 -78424458 - MIR SINE MIR -2 260 8 224 241 0 0 chr17 7014490 7014544 -78423936 + T-rich Low_complexity Low_complexity 1 54 0 307 330 106 28 chr17 7014605 7014784 -78423696 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7014823 7015119 -78423361 + AluY SINE Alu 1 294 -17 2116 91 24 3 chr17 7015361 7015648 -78422832 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7015652 7015943 -78422537 + AluSg1 SINE Alu 3 300 -9 867 138 0 0 chr17 7016727 7016850 -78421630 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7016884 7016994 -78421486 - MIR SINE MIR -38 224 108 1568 193 10 20 chr17 7017011 7017316 -78421164 - AluJb SINE Alu -10 302 1 2070 123 0 0 chr17 7017369 7017653 -78420827 + AluSg SINE Alu 3 286 -24 437 87 0 0 chr17 7017662 7017731 -78420749 + MER41B LTR ERV1 480 548 -87 2245 114 0 0 chr17 7017746 7018044 -78420436 + AluSx SINE Alu 1 298 -14 24 32 0 0 chr17 7019486 7019517 -78418963 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr17 7021030 7021062 -78417418 + GC_rich Low_complexity Low_complexity 1 32 0 28 79 0 0 chr17 7022094 7022157 -78416323 + GC_rich Low_complexity Low_complexity 1 63 0 1667 164 13 10 chr17 7023182 7023486 -78414994 - AluJb SINE Alu -7 305 1 2234 102 0 10 chr17 7023867 7024170 -78414310 - AluSq SINE Alu -13 300 1 738 204 21 14 chr17 7024239 7024381 -78414099 - FRAM SINE Alu -25 151 9 2199 93 0 3 chr17 7024391 7024680 -78413800 - AluSx SINE Alu -16 296 9 2484 55 0 10 chr17 7024698 7025010 -78413470 - AluY SINE Alu 0 311 3 1836 114 8 4 chr17 7025010 7025264 -78413216 - AluSx SINE Alu -57 255 1 189 0 0 0 chr17 7025270 7025291 -78413189 + (T)n Simple_repeat Simple_repeat 1 21 0 2313 96 0 6 chr17 7025305 7025617 -78412863 - AluSg SINE Alu 0 310 1 715 136 9 0 chr17 7025635 7025745 -78412735 - HY1 scRNA scRNA 0 112 2 265 267 222 11 chr17 7025802 7025982 -78412498 + L2 LINE L2 2531 2748 -566 2082 43 43 43 chr17 7025983 7026298 -78412182 + AluY SINE Alu 1 315 0 532 250 89 72 chr17 7026352 7026712 -78411768 + L2 LINE L2 2869 3234 -79 2198 130 0 9 chr17 7026786 7027101 -78411379 - AluSx SINE Alu 0 312 1 347 273 176 91 chr17 7027102 7027143 -78411337 - L2 LINE L2 -10 3303 3267 1061 164 6 0 chr17 7027143 7027302 -78411178 + FRAM SINE Alu 1 160 -6 2135 109 0 3 chr17 7027308 7027601 -78410879 + AluSg SINE Alu 1 292 -18 2038 88 26 39 chr17 7027609 7027917 -78410563 + AluSg SINE Alu 1 304 -6 2335 94 0 0 chr17 7027917 7028216 -78410264 + AluSq SINE Alu 1 299 -14 347 273 176 91 chr17 7028216 7028443 -78410037 - L2 LINE L2 -56 3257 2982 2165 114 0 13 chr17 7028443 7028750 -78409730 + AluSq SINE Alu 1 303 -10 347 273 176 91 chr17 7028750 7028804 -78409676 - L2 LINE L2 -331 2982 2934 688 180 78 106 chr17 7028857 7029074 -78409406 - MER20 DNA MER1_type 0 219 9 2131 115 10 0 chr17 7029154 7029450 -78409030 + AluSp SINE Alu 1 299 -14 362 286 97 39 chr17 7029459 7029674 -78408806 - L2 LINE L2 -2167 1147 946 1805 148 0 43 chr17 7029674 7029979 -78408501 + AluJb SINE Alu 3 294 -18 2060 75 45 24 chr17 7029979 7030292 -78408188 + AluY SINE Alu 1 311 0 362 286 97 39 chr17 7030292 7030334 -78408146 - L2 LINE L2 -2367 947 874 799 168 29 92 chr17 7030374 7030547 -78407933 + AluSq SINE Alu 1 162 -151 511 66 0 0 chr17 7030549 7030625 -78407855 + Alu SINE Alu 226 301 0 855 164 0 0 chr17 7030636 7030770 -78407710 + AluSg/x SINE Alu 161 294 -18 1979 132 24 0 chr17 7030775 7031064 -78407416 + AluSx SINE Alu 2 297 -15 954 321 106 27 chr17 7031066 7031393 -78407087 - L2 LINE L2 -2474 840 540 2293 91 0 0 chr17 7031393 7031691 -78406789 + AluSg SINE Alu 1 298 -12 2177 76 10 16 chr17 7031691 7031995 -78406485 + AluY SINE Alu 1 302 -9 954 321 106 27 chr17 7031995 7032268 -78406212 - L2 LINE L2 -2773 541 191 284 316 20 7 chr17 7032602 7032754 -78405726 + L1M4 LINE L1 3605 3758 -2388 2107 123 0 16 chr17 7032754 7032891 -78405589 + AluSx SINE Alu 1 139 -173 2176 67 0 0 chr17 7032891 7033161 -78405319 + AluY SINE Alu 37 306 -5 2107 123 0 16 chr17 7033161 7033333 -78405147 + AluSx SINE Alu 139 305 -7 262 316 0 60 chr17 7033333 7033379 -78405101 + L1M4 LINE L1 3844 3891 -2255 2178 116 0 0 chr17 7033379 7033681 -78404799 + AluY SINE Alu 1 302 -9 2438 75 3 0 chr17 7033685 7033991 -78404489 + AluSp SINE Alu 1 307 -6 262 316 0 60 chr17 7033991 7034107 -78404373 + L1M4 LINE L1 3894 4001 -2145 309 264 27 78 chr17 7034137 7034269 -78404211 + L1M4 LINE L1 4075 4212 -1934 2143 118 3 0 chr17 7034269 7034575 -78403905 + AluSg SINE Alu 2 308 -2 309 264 27 78 chr17 7034575 7034628 -78403852 + L1M4 LINE L1 4212 4246 -1900 2114 112 10 0 chr17 7034628 7034933 -78403547 + AluSp SINE Alu 2 309 -4 309 264 27 78 chr17 7034933 7035004 -78403476 + L1M4 LINE L1 4246 4319 -1827 315 122 0 0 chr17 7035067 7035116 -78403364 + (A)n Simple_repeat Simple_repeat 1 49 0 1833 170 23 3 chr17 7035116 7035422 -78403058 + AluJb SINE Alu 1 312 0 1082 331 66 64 chr17 7035429 7035455 -78403025 + L1M4 LINE L1 4345 4369 -1777 1942 127 0 3 chr17 7035455 7035760 -78402720 + AluSg SINE Alu 1 304 0 1082 331 66 64 chr17 7035760 7035989 -78402491 + L1M4 LINE L1 4369 4596 -1550 2082 121 0 3 chr17 7035989 7036287 -78402193 + AluSq SINE Alu 1 297 -16 1082 331 66 64 chr17 7036287 7036438 -78402042 + L1M4 LINE L1 4596 4745 -1401 2221 108 3 6 chr17 7036438 7036752 -78401728 + AluSq SINE Alu 1 313 0 1082 331 66 64 chr17 7036752 7037160 -78401320 + L1M4 LINE L1 4745 5167 -979 2022 138 0 0 chr17 7037160 7037457 -78401023 + AluSx SINE Alu 1 297 -15 1082 331 66 64 chr17 7037457 7037543 -78400937 + L1M4 LINE L1 5167 5251 -895 2287 104 3 0 chr17 7037550 7037858 -78400622 - AluSp SINE Alu -4 309 1 2163 89 0 0 chr17 7037869 7038175 -78400305 - AluY SINE Alu 0 306 1 2148 113 7 0 chr17 7038267 7038569 -78399911 + AluSx SINE Alu 1 304 -8 730 225 33 0 chr17 7038665 7038816 -78399664 + AluJb SINE Alu 140 295 -17 2163 110 3 7 chr17 7038818 7039127 -78399353 + AluSp SINE Alu 2 309 -4 2072 118 10 0 chr17 7039301 7039597 -78398883 - AluSx SINE Alu -13 299 1 205 362 92 28 chr17 7039916 7040134 -78398346 - L2 LINE L2 -708 2606 2375 304 268 27 80 chr17 7042412 7042524 -78395956 - MIR SINE MIR -75 187 82 220 261 0 0 chr17 7046451 7046497 -78391983 + C-rich Low_complexity Low_complexity 2 47 0 2292 68 13 7 chr17 7046695 7047002 -78391478 - AluY SINE Alu -1 310 2 1911 118 28 14 chr17 7048446 7048735 -78389745 - AluSx SINE Alu -13 299 7 959 154 91 11 chr17 7051142 7051317 -78387163 - MER5A DNA MER1_type 0 189 1 376 306 11 17 chr17 7053937 7054117 -78384363 + (CCG)n Simple_repeat Simple_repeat 2 180 0 21 36 0 0 chr17 7054324 7054352 -78384128 + GC_rich Low_complexity Low_complexity 1 28 0 943 86 0 0 chr17 7054831 7054959 -78383521 - AluSg/x SINE Alu 0 312 185 1976 99 7 3 chr17 7055055 7055357 -78383123 - AluSx SINE Alu 0 303 1 243 215 32 75 chr17 7055482 7055575 -78382905 + L2 LINE L2 2910 2998 -315 319 298 144 21 chr17 7055605 7055793 -78382687 + L2 LINE L2 3102 3312 -1 258 56 0 0 chr17 7055865 7055914 -78382566 + Alu SINE Alu 1 34 -267 2316 112 0 3 chr17 7056590 7056904 -78381576 + AluSq SINE Alu 1 313 0 1935 106 6 45 chr17 7056918 7057055 -78381425 + AluSx SINE Alu 1 142 -170 2085 78 13 42 chr17 7057055 7057362 -78381118 + AluY SINE Alu 1 298 -13 1935 106 6 45 chr17 7057362 7057536 -78380944 + AluSx SINE Alu 142 300 -12 1509 74 79 0 chr17 7057538 7057741 -78380739 + AluY SINE Alu 1 219 -92 1891 141 0 0 chr17 7057841 7058117 -78380363 - AluSx SINE Alu -36 276 1 1809 149 17 7 chr17 7058194 7058496 -78379984 - AluJb SINE Alu -7 305 1 668 267 172 9 chr17 7058602 7058934 -78379546 + MLT1G3 LTR MaLR 8 357 -173 2426 57 0 0 chr17 7059072 7059368 -78379112 + AluY SINE Alu 1 296 -15 395 328 111 16 chr17 7059570 7059759 -78378721 - L2 LINE L2 0 3313 3107 1207 131 0 0 chr17 7059804 7059979 -78378501 - AluSg/x SINE Alu -4 308 134 1953 59 4 0 chr17 7059979 7060217 -78378263 - AluSx SINE Alu -15 297 59 1824 146 0 55 chr17 7060394 7060544 -78377936 + AluJo SINE Alu 1 125 -187 2268 90 7 0 chr17 7060544 7060844 -78377636 + AluSg SINE Alu 1 302 -8 1824 146 0 55 chr17 7060844 7061021 -78377459 + AluJo SINE Alu 125 310 -2 2017 108 4 0 chr17 7061180 7061481 -78376999 + AluSx SINE Alu 6 307 0 235 340 65 39 chr17 7061574 7061806 -78376674 - L2 LINE L2 -224 3048 2811 196 322 163 56 chr17 7061798 7062031 -78376449 - L2 LINE L2 -763 2551 2294 * 1843 87 4 12 chr17 7062122 7062375 -78376105 + AluSc SINE Alu 1 251 -58 545 302 42 0 chr17 7062490 7062679 -78375801 + MIR SINE MIR 6 202 -60 380 295 0 0 chr17 7062679 7062791 -78375689 + MLT1F LTR MaLR 1 112 -430 752 219 18 0 chr17 7062796 7062965 -78375515 + MLT1F LTR MaLR 65 236 -306 2143 97 7 0 chr17 7062965 7063254 -78375226 + AluSx SINE Alu 1 291 -21 268 379 0 24 chr17 7063295 7063419 -78375061 - MIR SINE MIR -108 154 34 2071 136 0 0 chr17 7063504 7063799 -78374681 + AluSx SINE Alu 1 295 -17 229 322 89 0 chr17 7063837 7063927 -78374553 - L2 LINE L2 -46 3226 3129 233 307 74 61 chr17 7063943 7064106 -78374374 + L2 LINE L2 3037 3201 -112 1951 141 10 13 chr17 7064975 7065109 -78373371 + AluJb SINE Alu 1 134 -178 2191 105 0 25 chr17 7065109 7065423 -78373057 + AluSx SINE Alu 1 306 -6 1951 141 10 13 chr17 7065423 7065600 -78372880 + AluJb SINE Alu 134 311 -1 2014 157 0 0 chr17 7066209 7066508 -78371972 + AluSx SINE Alu 1 299 -13 2578 174 32 100 chr17 7066508 7066627 -78371853 + L1ME1 LINE L1 5429 5555 -611 1602 211 0 13 chr17 7066627 7066931 -78371549 + AluJo SINE Alu 1 300 -12 2232 78 0 7 chr17 7066933 7067257 -78371223 + AluY SINE Alu 1 322 0 2168 111 0 0 chr17 7067257 7067545 -78370935 + AluSx SINE Alu 2 289 -23 2107 85 32 3 chr17 7067554 7067837 -78370643 + AluSq SINE Alu 1 291 -22 2578 174 32 100 chr17 7067837 7067928 -78370552 + L1ME1 LINE L1 5563 5659 -507 2346 70 0 13 chr17 7067928 7068230 -78370250 + AluY SINE Alu 1 298 -13 2578 174 32 100 chr17 7068230 7068790 -78369690 + L1ME1 LINE L1 5659 6161 -5 1826 100 85 18 chr17 7068908 7069189 -78369291 + AluSq SINE Alu 1 300 -13 1584 218 26 71 chr17 7069351 7069841 -78368639 + MER21B LTR ERV1 1 468 -395 207 100 0 0 chr17 7069846 7069876 -78368604 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 2136 136 7 0 chr17 7069876 7070185 -78368295 - AluSx SINE Alu -1 311 1 1053 99 0 0 chr17 7070191 7070333 -78368147 - AluJb SINE Alu -170 142 1 1222 210 48 12 chr17 7070333 7070666 -78367814 + MER21B LTR ERV1 461 805 -58 219 349 92 0 chr17 7070809 7070918 -78367562 + L2 LINE L2 2705 2823 -491 * 330 248 165 0 chr17 7070897 7071006 -78367474 + L2 LINE L2 3146 3272 0 217 215 0 159 chr17 7071185 7071292 -78367188 + L2 LINE L2 2946 3035 -237 2261 101 0 0 chr17 7071293 7071591 -78366889 - AluSq SINE Alu -15 298 1 290 179 0 0 chr17 7071778 7071834 -78366646 + FLAM_A SINE Alu 11 66 -67 299 302 32 16 chr17 7071910 7072036 -78366444 + L1MEd LINE L1 561 688 -5431 890 209 12 0 chr17 7072050 7072222 -78366258 + FAM SINE Alu 1 46 -3 241 182 121 0 chr17 7072225 7072291 -78366189 + L1MEd LINE L1 682 755 -5364 368 306 64 25 chr17 7072507 7072638 -78365842 + L1M4 LINE L1 2662 2801 -4048 1849 167 23 3 chr17 7072638 7072944 -78365536 + AluJb SINE Alu 1 312 0 368 306 64 25 chr17 7072944 7072969 -78365511 + L1M4 LINE L1 2801 2824 -4025 * 551 332 66 19 chr17 7072951 7072977 -78365503 + L1M4 LINE L1 5047 5070 -1778 1942 127 0 3 chr17 7072977 7073286 -78365194 + AluSg SINE Alu 1 308 0 551 332 66 19 chr17 7073286 7073514 -78364966 + L1M4 LINE L1 5070 5314 -1534 2068 124 0 3 chr17 7073515 7073813 -78364667 + AluSq SINE Alu 1 297 -16 2207 100 3 7 chr17 7073964 7074264 -78364216 + AluSq SINE Alu 1 299 -14 352 296 301 10 chr17 7074505 7074701 -78363779 - MIR SINE MIR -2 260 8 215 245 0 0 chr17 7075169 7075222 -78363258 + T-rich Low_complexity Low_complexity 1 53 0 307 330 106 28 chr17 7075283 7075462 -78363018 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7075501 7075797 -78362683 + AluY SINE Alu 1 294 -17 2081 90 24 7 chr17 7076039 7076327 -78362153 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7076331 7076622 -78361858 + AluSg1 SINE Alu 3 300 -9 841 146 0 0 chr17 7077406 7077529 -78360951 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7077563 7077673 -78360807 - MIR SINE MIR -38 224 108 1559 102 13 0 chr17 7077853 7078079 -78360401 - AluY SINE Alu -82 229 1 299 227 21 31 chr17 7078083 7078180 -78360300 - L1M4 LINE L1 -492 5682 5587 228 35 0 0 chr17 7078228 7078257 -78360223 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1228 199 12 72 chr17 7078381 7078702 -78359778 - AluJo SINE Alu -10 302 1 212 307 27 0 chr17 7078746 7078821 -78359659 - MIR SINE MIR -102 160 84 2249 96 3 3 chr17 7078858 7079170 -78359310 - AluSx SINE Alu 0 312 1 2213 62 10 16 chr17 7079377 7079683 -78358797 - AluSg SINE Alu -6 304 1 2184 85 23 3 chr17 7079697 7080004 -78358476 - AluSp SINE Alu 0 313 1 276 130 0 0 chr17 7080931 7080977 -78357503 + (CGG)n Simple_repeat Simple_repeat 3 48 0 327 341 93 48 chr17 7083673 7084108 -78354372 - L1M4c LINE L1 -4863 1256 814 180 0 0 0 chr17 7085461 7085481 -78352999 + (T)n Simple_repeat Simple_repeat 1 20 0 207 100 0 0 chr17 7085654 7085684 -78352796 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 182 256 0 0 chr17 7085868 7085907 -78352573 + L2 LINE L2 253 291 -3023 243 321 12 0 chr17 7087987 7088071 -78350409 + CT-rich Low_complexity Low_complexity 6 90 0 22 88 0 0 chr17 7088616 7088673 -78349807 + GC_rich Low_complexity Low_complexity 1 57 0 23 33 0 0 chr17 7088724 7088754 -78349726 + GC_rich Low_complexity Low_complexity 1 30 0 335 309 149 54 chr17 7089832 7090118 -78348362 + L2 LINE L2 2836 3166 -147 2259 67 27 3 chr17 7090118 7090418 -78348062 + AluSc SINE Alu 1 307 -2 335 309 149 54 chr17 7090418 7090500 -78347980 + L2 LINE L2 3166 3239 -74 1195 133 0 11 chr17 7092162 7092342 -78346138 - AluJo SINE Alu -132 180 3 1860 163 0 0 chr17 7094067 7094367 -78344113 - AluJb SINE Alu -12 300 1 423 349 43 30 chr17 7097775 7098007 -78340473 - MIR SINE MIR -11 251 17 186 278 97 0 chr17 7099444 7099516 -78338964 + MIR SINE MIR 128 206 -56 2109 105 0 3 chr17 7099532 7099828 -78338652 - AluSx SINE Alu -17 295 1 1575 153 41 57 chr17 7101297 7101611 -78336869 - AluJo SINE Alu -3 309 1 4329 183 36 46 chr17 7102214 7103177 -78335303 + LTR13 LTR ERVK 1 954 0 2203 110 0 3 chr17 7103907 7104216 -78334264 - AluSg SINE Alu -1 309 2 2155 119 0 0 chr17 7104227 7104530 -78333950 - AluSx SINE Alu -4 308 6 224 226 30 83 chr17 7106428 7106561 -78331919 + G-rich Low_complexity Low_complexity 6 131 0 1730 186 3 0 chr17 7107051 7107342 -78331138 + AluJo SINE Alu 1 292 -20 833 272 92 13 chr17 7107645 7108140 -78330340 - L2 LINE L2 -69 3244 2709 385 214 0 0 chr17 7108156 7108226 -78330254 - MER91B DNA MER1_type -1 189 120 1995 164 0 0 chr17 7108235 7108547 -78329933 - AluSx SINE Alu 0 312 1 2011 117 7 10 chr17 7108566 7108866 -78329614 - AluSx SINE Alu 0 312 14 340 302 69 25 chr17 7108867 7109026 -78329454 - MER91B DNA MER1_type -13 177 12 239 209 0 75 chr17 7111416 7111483 -78326997 - L2 LINE L2 -18 3254 3193 450 273 120 34 chr17 7112218 7112303 -78326177 + MIR SINE MIR 1 77 -185 2334 64 7 0 chr17 7112303 7112598 -78325882 - AluY SINE Alu -14 297 1 450 273 120 34 chr17 7112598 7112721 -78325759 + MIR SINE MIR 77 227 -35 2412 40 0 13 chr17 7113533 7113833 -78324647 - AluSc SINE Alu -13 296 1 270 247 12 49 chr17 7114014 7114095 -78324385 - L2 LINE L2 0 3313 3236 30 45 0 0 chr17 7114992 7115036 -78323444 + GC_rich Low_complexity Low_complexity 1 44 0 1012 177 21 0 chr17 7119896 7120088 -78318392 + MER20 DNA MER1_type 1 196 -23 730 120 16 0 chr17 7120108 7120233 -78318247 + GA-rich Low_complexity Low_complexity 3 129 0 434 259 28 0 chr17 7120449 7120557 -78317923 - MER5B DNA MER1_type -5 173 63 2343 99 3 0 chr17 7120660 7120972 -78317508 - AluSq SINE Alu 0 313 1 47 14 0 29 chr17 7120983 7121019 -78317461 + AT_rich Low_complexity Low_complexity 1 36 -31 2162 114 3 0 chr17 7121019 7121316 -78317164 - AluSx SINE Alu -14 298 1 47 14 0 29 chr17 7121316 7121348 -78317132 + AT_rich Low_complexity Low_complexity 36 67 0 717 217 0 0 chr17 7121348 7121468 -78317012 - FLAM_C SINE Alu -23 120 1 276 272 0 87 chr17 7121495 7121587 -78316893 - MIR3 SINE MIR -49 159 76 21 0 0 0 chr17 7172508 7172529 -78265951 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 7173518 7173546 -78264934 + AT_rich Low_complexity Low_complexity 1 28 0 33 56 0 0 chr17 7174163 7174217 -78264263 + AT_rich Low_complexity Low_complexity 1 54 0 1969 159 72 100 chr17 7174543 7175072 -78263408 - LTR8A LTR ERV1 0 727 214 1109 188 0 0 chr17 7175205 7175423 -78263057 + L1 LINE L1 3592 3809 -2337 22 35 0 0 chr17 7175748 7175777 -78262703 + AT_rich Low_complexity Low_complexity 1 29 0 613 240 134 6 chr17 7175945 7176124 -78262356 + MLT1D LTR MaLR 304 505 0 266 132 19 0 chr17 7176295 7176348 -78262132 + (TA)n Simple_repeat Simple_repeat 1 54 0 1850 171 68 11 chr17 7176355 7176706 -78261774 - MSTB LTR MaLR -55 371 1 678 169 16 0 chr17 7176706 7176830 -78261650 - MSTB-int LTR MaLR 0 1651 1526 380 296 45 0 chr17 7176937 7177069 -78261411 + MIR SINE MIR 121 258 -4 204 40 0 0 chr17 7177266 7177291 -78261189 + (T)n Simple_repeat Simple_repeat 1 25 0 360 293 108 24 chr17 7177697 7177864 -78260616 - MIR3 SINE MIR -3 205 25 31 26 0 0 chr17 7178171 7178209 -78260271 + AT_rich Low_complexity Low_complexity 1 38 0 241 265 44 0 chr17 7178690 7178758 -78259722 + MIR SINE MIR 129 199 -63 694 144 23 0 chr17 7178883 7179015 -78259465 - L1MD1 LINE L1 -1 6241 6107 870 95 0 0 chr17 7179115 7179255 -78259225 + AluSg/x SINE Alu 166 305 0 2151 105 4 0 chr17 7179470 7179747 -78258733 - AluSq SINE Alu -35 278 1 808 103 52 0 chr17 7180371 7180517 -78257963 + AluY SINE Alu 163 314 0 2260 105 10 0 chr17 7180582 7180878 -78257602 - AluSq SINE Alu -14 299 1 473 271 110 7 chr17 7180878 7181024 -78257456 + MIR SINE MIR 95 259 -3 656 273 34 59 chr17 7181043 7181281 -78257199 - MIR SINE MIR -14 248 17 604 94 0 24 chr17 7181347 7181432 -78257048 + AluS SINE Alu 2 84 -229 320 229 10 52 chr17 7181432 7181528 -78256952 - L2 LINE L2 -414 2900 2809 2262 118 0 13 chr17 7181700 7182015 -78256465 - AluSx SINE Alu -1 311 1 736 232 24 66 chr17 7182403 7182474 -78256006 - L2 LINE L2 -538 2776 2704 2277 118 0 6 chr17 7182474 7182788 -78255692 - AluSx SINE Alu 0 312 1 736 232 24 66 chr17 7182788 7182927 -78255553 - L2 LINE L2 -610 2704 2575 1229 172 98 8 chr17 7182927 7183171 -78255309 + MER66B LTR ERV1 1 266 -220 2026 137 7 3 chr17 7183171 7183464 -78255016 + AluSx SINE Alu 1 294 -18 266 175 79 0 chr17 7183471 7183534 -78254946 - L2 LINE L2 -907 2407 2340 2278 109 3 3 chr17 7183535 7183846 -78254634 - AluSq SINE Alu -2 311 1 1416 157 7 19 chr17 7183967 7184265 -78254215 + MER61C LTR ERV1 17 404 -30 875 258 40 6 chr17 7184266 7184363 -78254117 + L1M4 LINE L1 1368 1460 -5082 2351 89 0 43 chr17 7184363 7184689 -78253791 + AluSx SINE Alu 1 312 0 875 258 40 6 chr17 7184689 7184913 -78253567 + L1M4 LINE L1 1460 1700 -4842 * 1069 204 28 34 chr17 7184894 7184926 -78253554 + L1MB8 LINE L1 5709 5740 -438 2229 107 10 7 chr17 7184926 7185236 -78253244 + AluSx SINE Alu 1 311 -1 1069 204 28 34 chr17 7185236 7185527 -78252953 + L1MB8 LINE L1 5740 6030 -148 2284 102 10 13 chr17 7185527 7185832 -78252648 - AluSg SINE Alu -6 304 1 1850 120 25 11 chr17 7185832 7186114 -78252366 - AluSq SINE Alu -5 308 22 822 109 0 0 chr17 7186214 7186324 -78252156 + AluSg/x SINE Alu 195 304 -8 2070 94 3 74 chr17 7186340 7186649 -78251831 + AluSq SINE Alu 16 302 -11 727 243 36 61 chr17 7186672 7186772 -78251708 - MIR SINE MIR -20 242 141 1966 83 55 0 chr17 7186772 7187026 -78251454 - AluSq SINE Alu -45 268 1 727 243 36 61 chr17 7187026 7187172 -78251308 - MIR SINE MIR -121 141 2 291 328 94 43 chr17 7187258 7187655 -78250825 + L2 LINE L2 2457 2897 -375 771 204 0 0 chr17 7187655 7187787 -78250693 + FLAM_A SINE Alu 1 132 -1 291 328 94 43 chr17 7187787 7187985 -78250495 + L2 LINE L2 2897 3084 -188 787 268 43 16 chr17 7188190 7188444 -78250036 + MIR SINE MIR 2 262 0 183 129 32 0 chr17 7188580 7188611 -78249869 - MIR SINE MIR -112 150 119 257 289 33 8 chr17 7190815 7190885 -78247595 + C-rich Low_complexity Low_complexity 1 77 -47 204 40 0 0 chr17 7190885 7190910 -78247570 + (CCG)n Simple_repeat Simple_repeat 3 27 0 257 289 33 8 chr17 7190910 7190960 -78247520 + C-rich Low_complexity Low_complexity 77 124 0 180 0 0 0 chr17 7190979 7190999 -78247481 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2634 39 0 3 chr17 7191727 7192033 -78246447 + AluY SINE Alu 1 305 -6 2048 110 7 29 chr17 7192162 7192470 -78246010 + AluSp SINE Alu 1 301 -12 1222 145 0 6 chr17 7192470 7192649 -78245831 + AluSp SINE Alu 134 311 -2 780 280 85 63 chr17 7196508 7196727 -78241753 - L2 LINE L2 -13 3300 3087 1864 82 0 0 chr17 7196727 7196993 -78241487 - AluSx SINE Alu 0 319 54 752 101 14 79 chr17 7196999 7197138 -78241342 - FLAM_C SINE Alu 0 133 4 780 280 85 63 chr17 7197138 7197594 -78240886 - L2 LINE L2 -230 3083 2583 313 278 56 0 chr17 7197716 7197806 -78240674 + L1ME LINE L1 4959 5053 -1093 545 262 150 30 chr17 7197989 7198301 -78240179 + L1ME LINE L1 5209 5583 -833 2218 109 7 0 chr17 7198301 7198595 -78239885 - AluSq SINE Alu -17 296 1 545 262 150 30 chr17 7198595 7198672 -78239808 + L1ME LINE L1 5583 5649 -767 980 292 128 42 chr17 7198694 7199292 -78239188 + L2 LINE L2 2370 2916 -397 1458 104 54 117 chr17 7199292 7199408 -78239072 - AluJo SINE Alu -15 297 175 2048 129 7 0 chr17 7199408 7199688 -78238792 + AluSg SINE Alu 17 298 -12 2512 67 0 0 chr17 7199688 7199987 -78238493 + AluY SINE Alu 1 299 -12 1458 104 54 117 chr17 7199987 7200186 -78238294 - AluJo SINE Alu -135 177 1 980 292 128 42 chr17 7200186 7200451 -78238029 + L2 LINE L2 2916 3313 0 372 340 49 14 chr17 7200452 7200596 -78237884 + L1ME LINE L1 5653 5801 -320 1779 202 104 49 chr17 7200613 7201073 -78237407 + MER119 DNA MER1_type 5 501 -82 1949 138 7 10 chr17 7201073 7201363 -78237117 - AluSx SINE Alu -23 289 1 1779 202 104 49 chr17 7201363 7201451 -78237029 + MER119 DNA MER1_type 501 583 0 786 145 0 30 chr17 7201549 7201680 -78236800 + FLAM_C SINE Alu 9 135 -8 1451 186 0 0 chr17 7201682 7201918 -78236562 + AluSq SINE Alu 1 236 -77 2114 127 0 17 chr17 7202449 7202749 -78235731 - AluSg SINE Alu -15 295 1 1073 96 0 0 chr17 7202749 7202885 -78235595 - AluSq/x SINE Alu -176 136 1 711 290 125 8 chr17 7202981 7203229 -78235251 - L2 LINE L2 -4 3268 2992 2164 134 16 0 chr17 7203575 7203882 -78234598 + AluSx SINE Alu 1 312 0 562 298 110 44 chr17 7204468 7204787 -78233693 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr17 7204966 7205006 -78233474 + AT_rich Low_complexity Low_complexity 1 40 0 442 63 48 16 chr17 7205210 7205273 -78233207 + Alu SINE Alu 226 290 -20 213 405 46 6 chr17 7205503 7205676 -78232804 - L2 LINE L2 -905 2409 2230 549 163 163 57 chr17 7205683 7205824 -78232656 - Tigger1 DNA MER2_type 0 2418 2263 2322 89 0 7 chr17 7205827 7206130 -78232350 - AluSx SINE Alu -11 301 1 2226 84 20 0 chr17 7206296 7206595 -78231885 + AluSc SINE Alu 1 305 -4 293 245 70 77 chr17 7208424 7208567 -78229913 + MIR SINE MIR 47 188 -74 182 357 56 8 chr17 7209770 7209896 -78228584 + L2 LINE L2 3137 3268 -4 2064 111 0 26 chr17 7209935 7210241 -78228239 - AluSx SINE Alu -8 304 7 2481 50 0 3 chr17 7211182 7211483 -78226997 + AluY SINE Alu 1 300 -11 1874 146 7 0 chr17 7211491 7211778 -78226702 + AluSq SINE Alu 1 289 -24 310 346 19 43 chr17 7215208 7215462 -78223018 - MIR SINE MIR 0 262 16 1877 97 43 18 chr17 7215500 7215778 -78222702 + AluSg SINE Alu 1 285 -25 26 0 0 0 chr17 7215916 7215942 -78222538 + AT_rich Low_complexity Low_complexity 1 26 0 3398 180 48 24 chr17 7215950 7215997 -78222483 + L1MB7 LINE L1 4456 4500 -1646 2059 112 14 0 chr17 7215997 7216293 -78222187 + AluSp SINE Alu 1 300 -13 3398 180 48 24 chr17 7216293 7217118 -78221362 + L1MB7 LINE L1 4500 5349 -797 2218 105 3 0 chr17 7217120 7217426 -78221054 + AluSp SINE Alu 1 307 -6 1069 45 0 8 chr17 7217428 7217560 -78220920 + AluY SINE Alu 1 131 -180 1941 184 89 49 chr17 7217574 7218050 -78220430 + L1MB7 LINE L1 5338 5793 -391 1509 151 50 14 chr17 7218050 7218328 -78220152 + AluSx SINE Alu 8 295 -17 1704 159 28 14 chr17 7218337 7218627 -78219853 + AluJb SINE Alu 1 294 -18 1941 184 89 49 chr17 7218627 7218656 -78219824 + L1MB7 LINE L1 5800 5753 -431 697 207 0 0 chr17 7218656 7218772 -78219708 + FLAM_C SINE Alu 2 117 -16 1941 184 89 49 chr17 7218772 7218851 -78219629 + L1MB7 LINE L1 5752 5826 -358 2119 93 7 14 chr17 7218969 7219260 -78219220 + AluSx SINE Alu 1 289 -23 2115 127 0 3 chr17 7219811 7220119 -78218361 + AluSq SINE Alu 3 309 -4 1495 64 11 0 chr17 7221010 7221197 -78217283 + AluSp SINE Alu 1 189 -124 2198 96 10 0 chr17 7221630 7221931 -78216549 + AluSp SINE Alu 1 304 -9 672 144 0 18 chr17 7222254 7222365 -78216115 + AluSg/x SINE Alu 190 298 -14 383 276 0 42 chr17 7224462 7224781 -78213699 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 200 324 0 41 chr17 7225178 7225348 -78213132 + (CCCA)n Simple_repeat Simple_repeat 1 163 0 237 307 57 11 chr17 7226026 7226114 -78212366 - L2 LINE L2 -27 3286 3195 268 295 57 16 chr17 7226143 7226265 -78212215 - L1ME4a LINE L1 -28 6093 5967 1977 135 10 3 chr17 7226479 7226783 -78211697 - AluSx SINE Alu -6 306 1 372 186 21 52 chr17 7226785 7226882 -78211598 - L1MDa LINE L1 -4595 1945 1852 325 184 23 46 chr17 7226892 7226979 -78211501 - LTR9 LTR ERV1 -86 526 442 344 281 79 14 chr17 7226992 7227131 -78211349 - L1MDa LINE L1 -4707 1833 1686 248 185 37 0 chr17 7227131 7227185 -78211295 - MLT2B2 LTR ERVL 0 515 460 2230 189 23 63 chr17 7227279 7227754 -78210726 - MLT2B2 LTR ERVL -58 457 2 351 304 41 50 chr17 7227756 7227855 -78210625 - L1MDa LINE L1 -4853 1687 1589 2240 91 0 0 chr17 7227855 7228152 -78210328 - AluY SINE Alu -14 297 1 351 304 41 50 chr17 7228152 7228272 -78210208 - L1MDa LINE L1 -4951 1589 1470 1886 123 13 51 chr17 7228277 7228593 -78209887 - AluSq SINE Alu -9 304 1 192 40 0 0 chr17 7228603 7228628 -78209852 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2421 60 0 0 chr17 7228657 7228958 -78209522 - AluY SINE Alu -10 301 1 965 227 152 4 chr17 7228961 7229225 -78209255 + MER82 DNA MER2_type 351 653 0 1821 151 14 0 chr17 7229292 7229577 -78208903 - AluJb SINE Alu -23 289 1 1963 129 23 7 chr17 7229584 7229887 -78208593 - AluSc SINE Alu -1 308 1 381 43 0 0 chr17 7229990 7230037 -78208443 + (TA)n Simple_repeat Simple_repeat 1 47 0 1851 124 9 46 chr17 7230037 7230350 -78208130 - AluSx SINE Alu -8 304 2 520 245 86 48 chr17 7230414 7230505 -78207975 - L1M4 LINE L1 -3700 2446 2360 2207 114 0 0 chr17 7230505 7230811 -78207669 - AluSx SINE Alu -6 306 1 520 245 86 48 chr17 7230811 7231033 -78207447 - L1M4 LINE L1 -3786 2360 2121 32 67 0 0 chr17 7231189 7231249 -78207231 + AT_rich Low_complexity Low_complexity 1 60 0 857 226 6 0 chr17 7231268 7231432 -78207048 + AluJb SINE Alu 121 285 -27 21 0 0 0 chr17 7232088 7232109 -78206371 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 7232316 7232337 -78206143 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 7234412 7234440 -78204040 + GC_rich Low_complexity Low_complexity 1 28 0 206 175 0 18 chr17 7234459 7234516 -78203964 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr17 7234949 7234970 -78203510 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 30 27 0 0 chr17 7235959 7235996 -78202484 + GC_rich Low_complexity Low_complexity 1 37 0 237 33 0 0 chr17 7237083 7237113 -78201367 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr17 7237313 7237377 -78201103 + C-rich Low_complexity Low_complexity 5 68 0 875 143 0 0 chr17 7238451 7238584 -78199896 - AluSq/x SINE Alu -179 133 1 307 285 49 8 chr17 7242361 7242484 -78195996 + MER112 DNA MER1_type 34 161 -99 507 17 0 0 chr17 7242484 7242544 -78195936 + (TG)n Simple_repeat Simple_repeat 1 60 0 559 167 0 53 chr17 7242548 7242662 -78195818 - FLAM_C SINE Alu -34 109 2 297 268 12 0 chr17 7242663 7242745 -78195735 + MER112 DNA MER1_type 166 248 -12 368 348 6 25 chr17 7242750 7242908 -78195572 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr17 7243141 7243184 -78195296 + GC_rich Low_complexity Low_complexity 1 43 0 2190 97 16 3 chr17 7243967 7244275 -78194205 + AluSq SINE Alu 2 313 0 2267 83 3 3 chr17 7244276 7244577 -78193903 + AluSq SINE Alu 1 301 -12 2492 53 0 0 chr17 7245277 7245576 -78192904 - AluY SINE Alu -12 299 1 815 169 0 0 chr17 7245692 7245816 -78192664 + AluJb SINE Alu 162 285 -27 839 145 0 0 chr17 7245820 7245944 -78192536 - FLAM_C SINE Alu -19 124 1 2326 86 3 0 chr17 7246550 7246854 -78191626 - AluSq SINE Alu -8 305 1 2475 49 3 0 chr17 7247801 7248108 -78190372 - AluSx SINE Alu -4 308 1 407 276 32 32 chr17 7248751 7248790 -78189690 + L2 LINE L2 3190 3228 -85 2376 65 3 0 chr17 7248790 7249084 -78189396 + AluSp SINE Alu 1 295 -18 407 276 32 32 chr17 7249084 7249167 -78189313 + L2 LINE L2 3227 3312 -1 788 186 0 0 chr17 7249210 7249339 -78189141 + FLAM_C SINE Alu 2 130 -3 321 282 64 9 chr17 7249536 7249646 -78188834 + MIR SINE MIR 96 211 -51 2104 102 0 0 chr17 7249724 7250009 -78188471 - AluSg SINE Alu -9 301 17 850 142 0 0 chr17 7250112 7250232 -78188248 - FLAM_C SINE Alu -23 120 1 2203 103 7 0 chr17 7250261 7250562 -78187918 + AluSq SINE Alu 3 305 -8 247 303 63 42 chr17 7250565 7250707 -78187773 + MER102b DNA MER1_type 169 313 -28 210 200 20 0 chr17 7251746 7251796 -78186684 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 141 0 0 chr17 7254774 7254845 -78183635 + (TCC)n Simple_repeat Simple_repeat 2 72 0 740 83 28 0 chr17 7256098 7256206 -78182274 + AluSg/x SINE Alu 198 308 -1 2289 85 0 29 chr17 7256309 7256625 -78181855 + AluSx SINE Alu 1 307 -5 2557 50 0 0 chr17 7256629 7256931 -78181549 + AluY SINE Alu 2 303 -8 2053 97 13 32 chr17 7256932 7257243 -78181237 + AluSg SINE Alu 2 306 -4 615 152 20 0 chr17 7257243 7257342 -78181138 - AluJo/FLAM SINE Alu -187 125 25 432 161 0 0 chr17 7258221 7258302 -78180178 + GA-rich Low_complexity Low_complexity 3 83 0 2224 77 0 26 chr17 7259841 7260151 -78178329 + AluSq SINE Alu 1 302 -11 817 111 8 0 chr17 7260921 7261038 -78177442 - AluSg/x SINE Alu -13 299 182 1817 125 22 47 chr17 7261570 7261889 -78176591 + AluSx SINE Alu 1 311 -1 2182 103 3 0 chr17 7261891 7262192 -78176288 + AluSc SINE Alu 1 302 -7 2044 143 0 0 chr17 7262204 7262498 -78175982 + AluJo SINE Alu 1 294 -18 2159 109 0 7 chr17 7262500 7262802 -78175678 + AluSq SINE Alu 1 300 -13 439 353 0 0 chr17 7262806 7262928 -78175552 - MIR SINE MIR -136 126 5 322 331 190 0 chr17 7262981 7263123 -78175357 - MER91A DNA MER1_type -22 174 6 1271 152 0 14 chr17 7263279 7263489 -78174991 - AluJo SINE Alu -19 293 87 198 329 0 14 chr17 7263492 7263565 -78174915 - MIR SINE MIR -21 241 170 657 197 16 8 chr17 7263749 7263871 -78174609 + MIR SINE MIR 76 198 -64 425 295 98 6 chr17 7264095 7264278 -78174202 + L2 LINE L2 2942 3141 -172 2320 81 0 0 chr17 7264279 7264577 -78173903 - AluSg SINE Alu -12 298 1 926 135 0 14 chr17 7264578 7264719 -78173761 - AluSq/x SINE Alu -173 139 1 1840 166 3 10 chr17 7264720 7265033 -78173447 - AluJb SINE Alu -1 311 1 2055 78 0 32 chr17 7265040 7265200 -78173280 - AluSx SINE Alu -15 297 148 2413 56 0 10 chr17 7265200 7265503 -78172977 - AluY SINE Alu -11 300 1 2055 78 0 32 chr17 7265503 7265626 -78172854 - AluSx SINE Alu -164 148 23 1713 179 0 10 chr17 7265637 7265938 -78172542 - AluJb SINE Alu -14 298 1 2068 115 0 38 chr17 7265993 7266307 -78172173 - AluSx SINE Alu -8 304 3 1782 167 3 10 chr17 7266309 7266609 -78171871 - AluJb SINE Alu -14 298 1 332 241 0 80 chr17 7266610 7266722 -78171758 + L2 LINE L2 3210 3312 -1 821 93 0 0 chr17 7266821 7266928 -78171552 + AluSq/x SINE Alu 1 107 -205 430 341 0 0 chr17 7268967 7269143 -78169337 + (CTGGGG)n Simple_repeat Simple_repeat 3 178 0 214 278 17 17 chr17 7269183 7269298 -78169182 + (CTGGGG)n Simple_repeat Simple_repeat 1 115 0 356 309 6 23 chr17 7269318 7269493 -78168987 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 1857 100 55 52 chr17 7270817 7271023 -78167457 - AluSx SINE Alu -1 311 102 2321 89 0 7 chr17 7271023 7271327 -78167153 - AluY SINE Alu -9 302 1 1857 100 55 52 chr17 7271327 7271430 -78167050 - AluSx SINE Alu -210 102 1 237 178 0 0 chr17 7273012 7273057 -78165423 + (CGG)n Simple_repeat Simple_repeat 3 47 0 2012 123 18 0 chr17 7274517 7274802 -78163678 + AluSx SINE Alu 1 290 -22 609 14 0 0 chr17 7274803 7274873 -78163607 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 1781 110 88 0 chr17 7274877 7275175 -78163305 + AluSx SINE Alu 2 323 0 298 325 16 16 chr17 7275735 7275858 -78162622 + MIR SINE MIR 73 195 -67 2430 71 0 19 chr17 7275880 7276191 -78162289 - AluY SINE Alu -6 305 1 2039 78 13 49 chr17 7276191 7276498 -78161982 - AluY SINE Alu -15 296 1 971 155 25 6 chr17 7276782 7276943 -78161537 + AluJb SINE Alu 120 283 -29 1336 160 53 97 chr17 7276963 7277100 -78161380 + AluJo SINE Alu 3 144 -168 1983 129 0 7 chr17 7277100 7277394 -78161086 + AluSx SINE Alu 5 296 -16 1336 160 53 97 chr17 7277394 7277426 -78161054 + AluJo SINE Alu 144 176 -136 180 0 0 0 chr17 7277426 7277446 -78161034 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1336 160 53 97 chr17 7277446 7277594 -78160886 + AluJo SINE Alu 176 307 -5 224 208 21 0 chr17 7281170 7281218 -78157262 + G-rich Low_complexity Low_complexity 1 49 0 250 289 0 10 chr17 7281632 7281736 -78156744 + G-rich Low_complexity Low_complexity 3 105 0 290 287 22 39 chr17 7282556 7282737 -78155743 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 * 307 279 12 43 chr17 7282688 7282849 -78155631 + (CAGAGA)n Simple_repeat Simple_repeat 4 159 0 244 273 45 0 chr17 7283117 7283183 -78155297 + L2 LINE L2 3210 3278 -35 328 159 16 0 chr17 7285469 7285532 -78152948 - MER61-int LTR ERV1 -239 4978 4915 2006 99 64 3 chr17 7285532 7285814 -78152666 + AluSx SINE Alu 1 299 -13 1892 97 44 69 chr17 7285817 7286136 -78152344 + AluSq SINE Alu 3 313 0 6060 110 7 8 chr17 7286138 7287092 -78151388 - MER61-int LTR ERV1 -631 4586 3634 1973 114 61 7 chr17 7287100 7287397 -78151083 - AluSp SINE Alu 0 313 1 320 176 0 14 chr17 7287402 7287476 -78151004 + C-rich Low_complexity Low_complexity 1 73 0 1921 136 0 4 chr17 7287485 7287765 -78150715 - AluSx SINE Alu -33 279 1 5706 96 6 22 chr17 7287765 7288394 -78150086 - MER61-int LTR ERV1 -1586 3631 3018 2424 58 0 0 chr17 7288394 7288689 -78149791 - AluY SINE Alu -16 295 1 5706 96 6 22 chr17 7288689 7288966 -78149514 - MER61-int LTR ERV1 -2199 3018 2738 2899 55 3 31 chr17 7288966 7289081 -78149399 - L1PA8 LINE L1 -2 6170 6053 2066 101 7 7 chr17 7289081 7289096 -78149384 - AluSp SINE Alu -17 296 282 270 0 0 0 chr17 7289096 7289126 -78149354 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr17 7289125 7289147 -78149333 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 2066 101 7 7 chr17 7289126 7289427 -78149053 - AluSp SINE Alu -30 283 1 2899 55 3 31 chr17 7289427 7289692 -78148788 - L1PA8 LINE L1 -119 6053 5801 581 297 110 78 chr17 7340499 7340843 -78097637 + L2 LINE L2 1598 1929 -1385 2337 103 0 0 chr17 7340843 7341145 -78097335 - AluSx SINE Alu -9 303 2 581 297 110 78 chr17 7341145 7341671 -78096809 + L2 LINE L2 1929 2496 -818 755 212 29 0 chr17 7341782 7341952 -78096528 - Charlie8 DNA MER1_type -2157 260 86 2646 40 0 0 chr17 7342087 7342383 -78096097 - AluY SINE Alu -15 296 1 332 280 89 78 chr17 7342415 7342616 -78095864 + L1M4 LINE L1 4214 4420 -1726 315 0 0 0 chr17 7342616 7342651 -78095829 + (TG)n Simple_repeat Simple_repeat 2 36 0 332 280 89 78 chr17 7342651 7342706 -78095774 + L1M4 LINE L1 4420 4473 -1673 808 203 7 13 chr17 7342706 7342859 -78095621 + AluJb SINE Alu 134 285 -27 267 31 0 0 chr17 7342859 7342891 -78095589 + (CA)n Simple_repeat Simple_repeat 2 33 0 782 293 150 49 chr17 7342899 7343387 -78095093 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 7343387 7343416 -78095064 + AT_rich Low_complexity Low_complexity 1 29 0 595 156 0 2 chr17 7343419 7343695 -78094785 + AluSx SINE Alu 1 325 0 252 221 15 0 chr17 7344132 7344200 -78094280 + HAL1 LINE L1 840 908 -1599 837 204 171 24 chr17 7344214 7344548 -78093932 + HAL1 LINE L1 1581 1963 -544 538 133 7 156 chr17 7344629 7344764 -78093716 + AluSq/x SINE Alu 2 116 -196 207 100 0 0 chr17 7344765 7344795 -78093685 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2324 88 0 7 chr17 7344802 7345097 -78093383 - AluSg SINE Alu -17 293 1 400 290 49 11 chr17 7345098 7345281 -78093199 + HAL1 LINE L1 2029 2218 -289 2533 83 3 0 chr17 7345473 7345785 -78092695 - AluSp SINE Alu 0 313 1 1907 158 3 3 chr17 7346016 7346319 -78092161 + AluJb SINE Alu 1 303 -9 352 242 25 50 chr17 7347381 7347542 -78090938 + L1MC4a LINE L1 5734 5890 -1918 709 112 103 26 chr17 7347547 7347663 -78090817 + FLAM_C SINE Alu 5 129 -4 2551 79 0 0 chr17 7347798 7348102 -78090378 - AluSq SINE Alu -4 309 6 337 272 97 61 chr17 7348800 7348914 -78089566 - MIR SINE MIR -122 140 23 1861 125 96 0 chr17 7348992 7349272 -78089208 - AluJo SINE Alu 0 312 6 1107 80 12 19 chr17 7349286 7349448 -78089032 - L1PA13 LINE L1 0 6163 6003 2387 99 0 0 chr17 7349517 7349819 -78088661 + AluSx SINE Alu 1 302 -10 1845 77 0 0 chr17 7350493 7350714 -78087766 - AluSg/x SINE Alu -5 307 87 348 221 77 10 chr17 7350831 7350935 -78087545 + L2 LINE L2 3199 3309 -4 2103 124 7 0 chr17 7351130 7351428 -78087052 - AluJb SINE Alu -12 300 1 2180 132 0 3 chr17 7352361 7352664 -78085816 - AluSx SINE Alu -10 302 1 2441 85 7 0 chr17 7352849 7353155 -78085325 + AluSp SINE Alu 1 308 -5 2456 70 0 3 chr17 7353155 7353606 -78084874 + AluY SINE Alu 1 451 0 804 292 29 0 chr17 7354484 7354693 -78083787 - MIR SINE MIR -20 242 28 2384 79 0 0 chr17 7355384 7355688 -78082792 - AluSx SINE Alu -8 304 1 2293 76 0 19 chr17 7356183 7356500 -78081980 + AluY SINE Alu 1 311 0 2238 109 0 0 chr17 7357809 7358112 -78080368 - AluSq SINE Alu -10 303 1 792 125 117 0 chr17 7358639 7358759 -78079721 + AluJo SINE Alu 3 136 -176 2318 86 0 0 chr17 7358759 7359063 -78079417 + AluSx SINE Alu 1 304 -8 1903 139 36 3 chr17 7359073 7359375 -78079105 + AluJb SINE Alu 1 312 0 2235 94 3 22 chr17 7359382 7359700 -78078780 + AluSx SINE Alu 1 312 0 2351 90 0 3 chr17 7361035 7361345 -78077135 + AluSg SINE Alu 1 309 -1 418 226 59 0 chr17 7361926 7362028 -78076452 + L2 LINE L2 3205 3312 -1 2297 105 0 0 chr17 7362353 7362659 -78075821 - AluSx SINE Alu -6 306 1 2393 93 0 0 chr17 7362755 7363065 -78075415 - AluSp SINE Alu -3 310 1 1067 218 102 18 chr17 7363099 7363540 -78074940 - HAL1b LINE L1 0 1348 871 312 265 147 0 chr17 7363535 7363637 -78074843 - L1MC4 LINE L1 -359 7683 7567 * 2147 113 0 10 chr17 7363637 7363650 -78074830 - AluSx SINE Alu -5 307 295 257 0 30 0 chr17 7363650 7363683 -78074797 + (TTTAA)n Simple_repeat Simple_repeat 2 35 0 2147 113 0 10 chr17 7363683 7363979 -78074501 - AluSx SINE Alu -17 295 1 780 83 0 50 chr17 7363984 7364104 -78074376 - AluSg/x SINE Alu -9 300 187 433 256 7 29 chr17 7364104 7364241 -78074239 - L1MC4 LINE L1 -465 7577 7444 273 251 161 35 chr17 7364287 7364486 -78073994 - HAL1b LINE L1 -1055 293 70 2180 85 3 0 chr17 7365082 7365385 -78073095 + AluSp SINE Alu 1 304 0 741 177 0 8 chr17 7365405 7365535 -78072945 - FLAM_A SINE Alu -1 141 13 2110 124 0 0 chr17 7365798 7366097 -78072383 - AluJb SINE Alu -1 311 13 345 361 50 41 chr17 7366123 7366342 -78072138 - L1M4 LINE L1 -1593 4553 4333 334 209 77 11 chr17 7366373 7366464 -78072016 - U6 snRNA snRNA -9 98 2 326 278 40 48 chr17 7366492 7366618 -78071862 - L1MC4 LINE L1 0 8042 7918 347 330 86 40 chr17 7366804 7367030 -78071450 + L2 LINE L2 2934 3179 -93 2345 81 0 13 chr17 7367030 7367340 -78071140 - AluSc SINE Alu -3 306 1 347 330 86 40 chr17 7367340 7367416 -78071064 + L2 LINE L2 3179 3250 -22 225 0 0 0 chr17 7367884 7367909 -78070571 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2210 98 3 0 chr17 7368209 7368504 -78069976 + AluSx SINE Alu 1 296 -16 2092 109 0 0 chr17 7368506 7368817 -78069663 + AluSx SINE Alu 1 311 0 338 329 72 83 chr17 7368886 7369063 -78069417 + L1ME4a LINE L1 5640 5817 -304 2040 97 0 58 chr17 7369063 7369371 -78069109 + AluSg SINE Alu 1 290 -20 338 329 72 83 chr17 7369371 7369422 -78069058 + L1ME4a LINE L1 5817 5867 -254 2153 117 0 0 chr17 7369422 7369730 -78068750 + AluSx SINE Alu 1 308 -4 338 329 72 83 chr17 7369730 7369769 -78068711 + L1ME4a LINE L1 5867 5905 -216 2009 140 0 3 chr17 7369769 7370069 -78068411 + AluSx SINE Alu 1 299 -13 338 329 72 83 chr17 7370069 7370155 -78068325 + L1ME4a LINE L1 5905 5990 -131 2092 101 9 25 chr17 7370155 7370473 -78068007 - AluSq SINE Alu 0 313 1 338 329 72 83 chr17 7370473 7370587 -78067893 + L1ME4a LINE L1 5990 6105 -16 2206 106 3 0 chr17 7371240 7371543 -78066937 + AluSx SINE Alu 1 304 -8 2385 77 0 6 chr17 7371543 7371855 -78066625 + AluY SINE Alu 1 311 0 1690 210 75 5 chr17 7371874 7372274 -78066206 + L1MB5 LINE L1 5593 6020 -154 697 169 54 0 chr17 7372349 7372497 -78065983 + L1MB7 LINE L1 6029 6184 0 2054 110 3 23 chr17 7372507 7372817 -78065663 + AluSx SINE Alu 1 304 -8 2303 90 0 0 chr17 7373338 7373639 -78064841 + AluSx SINE Alu 1 301 -11 1153 142 0 0 chr17 7373639 7373815 -78064665 + AluSg/x SINE Alu 137 312 0 2257 102 0 3 chr17 7375383 7375686 -78062794 + AluSx SINE Alu 1 302 -10 222 347 7 20 chr17 7376823 7376970 -78061510 + C-rich Low_complexity Low_complexity 2 146 0 24 0 0 0 chr17 7377577 7377601 -78060879 + GC_rich Low_complexity Low_complexity 1 24 0 1762 89 155 4 chr17 7380321 7380592 -78057888 + AluSx SINE Alu 1 312 0 372 43 0 0 chr17 7380645 7380691 -78057789 + (CA)n Simple_repeat Simple_repeat 2 47 0 691 299 115 20 chr17 7381123 7381307 -78057173 + L2 LINE L2 2884 3049 -264 2021 94 0 14 chr17 7381307 7381630 -78056850 + AluSx SINE Alu 1 319 0 691 299 115 20 chr17 7381630 7381836 -78056644 + L2 LINE L2 3049 3312 -1 21 0 0 0 chr17 7383452 7383473 -78055007 + AT_rich Low_complexity Low_complexity 1 21 0 385 225 45 36 chr17 7388063 7388174 -78050306 - MIR SINE MIR -131 131 20 22 56 0 0 chr17 7389758 7389794 -78048686 + GC_rich Low_complexity Low_complexity 1 36 0 486 288 0 34 chr17 7390056 7390237 -78048243 - MIR3 SINE MIR -55 153 14 190 269 30 0 chr17 7392825 7392892 -78045588 + MIR SINE MIR 76 144 -118 1133 60 0 0 chr17 7393407 7393541 -78044939 + AluSx SINE Alu 1 134 -179 1969 129 14 0 chr17 7393543 7393837 -78044643 + AluSx SINE Alu 1 298 -14 1038 98 0 75 chr17 7394275 7394449 -78044031 - AluSx SINE Alu -151 161 1 1122 154 0 0 chr17 7394586 7394774 -78043706 + AluSx SINE Alu 124 311 -1 1826 148 20 3 chr17 7394779 7395083 -78043397 + AluJb SINE Alu 1 309 -3 796 66 0 16 chr17 7395272 7395394 -78043086 + (TA)n Simple_repeat Simple_repeat 2 121 0 795 315 89 40 chr17 7395932 7396000 -78042480 + L2 LINE L2 2826 2889 -424 2007 131 3 0 chr17 7396000 7396328 -78042152 - AluSx SINE Alu 0 329 1 1882 152 0 0 chr17 7396330 7396626 -78041854 - AluSx SINE Alu -16 296 1 795 315 89 40 chr17 7396626 7397001 -78041479 + L2 LINE L2 2889 3295 -18 2089 129 0 0 chr17 7397007 7397309 -78041171 + AluSx SINE Alu 1 302 -10 494 263 141 57 chr17 7399131 7399428 -78039052 - L2 LINE L2 -2 3311 2990 2696 211 99 40 chr17 7401289 7401519 -78036961 - L1ME2 LINE L1 0 6164 5949 2051 71 43 4 chr17 7401519 7401799 -78036681 + AluSq SINE Alu 1 291 -22 2696 211 99 40 chr17 7401799 7402791 -78035689 - L1ME2 LINE L1 -215 5949 4873 1663 161 37 3 chr17 7402841 7403139 -78035341 - AluJo SINE Alu -4 308 1 1417 224 56 105 chr17 7403185 7403245 -78035235 + L1M4 LINE L1 3554 3615 -2531 2114 130 3 0 chr17 7403245 7403552 -78034928 + AluSx SINE Alu 1 308 -4 1417 224 56 105 chr17 7403552 7403724 -78034756 + L1M4 LINE L1 3615 3794 -2352 2191 109 0 13 chr17 7403724 7403860 -78034620 + AluSx SINE Alu 1 137 -175 2241 79 14 0 chr17 7403860 7404151 -78034329 + AluSg SINE Alu 1 295 -15 2191 109 0 13 chr17 7404151 7404326 -78034154 + AluSx SINE Alu 137 308 -4 1417 224 56 105 chr17 7404326 7404385 -78034095 + L1M4 LINE L1 3794 3854 -2292 748 162 8 0 chr17 7404385 7404502 -78033978 + FLAM_C SINE Alu 1 118 -15 1417 224 56 105 chr17 7404502 7404742 -78033738 + L1M4 LINE L1 3854 4104 -2042 2385 60 6 19 chr17 7404742 7405056 -78033424 + AluY SINE Alu 2 311 0 1417 224 56 105 chr17 7405056 7405163 -78033317 + L1M4 LINE L1 4104 4215 -1931 2470 62 0 0 chr17 7405163 7405470 -78033010 + AluY SINE Alu 1 307 -4 1931 124 0 46 chr17 7405478 7405620 -78032860 + AluSq SINE Alu 6 153 -160 2360 74 0 3 chr17 7405620 7405917 -78032563 + AluSq SINE Alu 1 296 -17 1931 124 0 46 chr17 7405917 7406097 -78032383 + AluSq SINE Alu 153 313 0 1417 224 56 105 chr17 7406097 7406169 -78032311 + L1M4 LINE L1 4222 4296 -1850 1796 105 52 8 chr17 7406169 7406435 -78032045 + AluSq SINE Alu 1 278 -35 2100 102 12 46 chr17 7406435 7406758 -78031722 + AluSx SINE Alu 1 312 0 1417 224 56 105 chr17 7406436 7406836 -78031644 + L1M4 LINE L1 4296 4313 -1833 928 171 22 75 chr17 7406836 7407064 -78031416 + MER2 DNA MER2_type 2 217 -128 230 241 35 0 chr17 7407558 7407616 -78030864 - MIR SINE MIR -3 259 200 1927 124 14 3 chr17 7407643 7407977 -78030503 + AluSq SINE Alu 1 313 0 2355 73 13 0 chr17 7408039 7408340 -78030140 + AluSp SINE Alu 1 305 -8 1070 147 47 21 chr17 7408453 7408502 -78029978 + AluJo SINE Alu 88 134 -174 2165 114 0 16 chr17 7408502 7408819 -78029661 + AluSx SINE Alu 1 312 0 1070 147 47 21 chr17 7408819 7408985 -78029495 + AluJo SINE Alu 134 308 0 2107 112 6 3 chr17 7408992 7409304 -78029176 + AluSq SINE Alu 1 313 0 354 242 96 45 chr17 7409451 7409649 -78028831 - L2 LINE L2 -17 3296 3089 2108 118 3 0 chr17 7410020 7410317 -78028163 + AluSx SINE Alu 1 298 -14 210 285 134 45 chr17 7410318 7410497 -78027983 - L2 LINE L2 -1810 1504 1310 1941 146 0 13 chr17 7411558 7411867 -78026613 + AluJb SINE Alu 1 305 -7 218 280 21 54 chr17 7412489 7412582 -78025898 - MIR SINE MIR -70 192 103 2296 60 7 13 chr17 7412596 7412895 -78025585 + AluY SINE Alu 1 297 -14 844 112 0 0 chr17 7413986 7414111 -78024369 - MER47A DNA MER2_type 0 366 242 2165 82 0 51 chr17 7414111 7414427 -78024053 - AluSg SINE Alu -10 300 1 1121 179 28 14 chr17 7414439 7414657 -78023823 - AluJo SINE Alu -11 301 81 868 163 0 25 chr17 7414665 7414825 -78023655 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 7414825 7414863 -78023617 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2234 78 0 0 chr17 7414863 7415146 -78023334 - AluSg SINE Alu -27 283 1 1522 192 31 3 chr17 7415148 7415440 -78023040 - AluJo SINE Alu -12 300 1 923 116 0 26 chr17 7415440 7415595 -78022885 - MER47A DNA MER2_type -116 250 100 2271 80 7 0 chr17 7415656 7415955 -78022525 + AluSx SINE Alu 1 301 -11 735 176 0 24 chr17 7415958 7416083 -78022397 + FLAM_A SINE Alu 5 126 -7 2019 138 0 0 chr17 7416084 7416382 -78022098 + AluSx SINE Alu 1 298 -14 521 217 0 19 chr17 7416397 7416503 -78021977 - MER47A DNA MER2_type -259 107 4 2147 80 23 13 chr17 7417058 7417360 -78021120 + AluSp SINE Alu 1 305 -8 246 320 58 10 chr17 7418011 7418114 -78020366 + MIR SINE MIR 110 217 -45 1853 159 10 0 chr17 7418399 7418708 -78019772 - AluJb SINE Alu 0 312 1 25 0 0 0 chr17 7419982 7420007 -78018473 + AT_rich Low_complexity Low_complexity 1 25 0 810 213 23 74 chr17 7420007 7420223 -78018257 - L1MA9 LINE L1 -2 6310 6106 2119 113 3 0 chr17 7420386 7420688 -78017792 + AluSq SINE Alu 1 303 -10 238 258 118 21 chr17 7420794 7420887 -78017593 - L2 LINE L2 -3 3310 3209 1208 113 0 6 chr17 7421023 7421200 -78017280 + AluSg/x SINE Alu 137 312 0 537 134 0 72 chr17 7421341 7421438 -78017042 + AluJo/FLAM SINE Alu 22 111 -201 2428 75 0 0 chr17 7421439 7421746 -78016734 - AluY SINE Alu -4 307 1 36 77 0 0 chr17 7421761 7421839 -78016641 + AT_rich Low_complexity Low_complexity 1 78 0 1988 101 61 7 chr17 7421855 7422151 -78016329 - AluSx SINE Alu 0 312 1 324 272 57 57 chr17 7422151 7422309 -78016171 + L1M4 LINE L1 3820 3977 -2169 1938 122 7 7 chr17 7422378 7422673 -78015807 + AluSx SINE Alu 1 295 -17 703 241 41 20 chr17 7422673 7422773 -78015707 + AluJo SINE Alu 11 107 -205 921 16 24 0 chr17 7422773 7422896 -78015584 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 2142 100 0 7 chr17 7422900 7423200 -78015280 + AluSc SINE Alu 1 298 -11 703 241 41 20 chr17 7423200 7423289 -78015191 + AluJo SINE Alu 109 209 -103 24 22 0 43 chr17 7423317 7423338 -78015142 + AT_rich Low_complexity Low_complexity 1 21 -23 2103 99 7 0 chr17 7423338 7423632 -78014848 + AluSg SINE Alu 1 296 -14 24 22 0 43 chr17 7423632 7423656 -78014824 + AT_rich Low_complexity Low_complexity 21 44 0 1999 123 0 3 chr17 7423681 7423997 -78014483 - AluSg SINE Alu 0 310 1 244 0 27 27 chr17 7424087 7424124 -78014356 + (TTATA)n Simple_repeat Simple_repeat 5 41 0 544 292 92 71 chr17 7424158 7424332 -78014148 + L1M4 LINE L1 4217 4386 -1760 2011 144 7 0 chr17 7424332 7424637 -78013843 + AluSx SINE Alu 1 307 -5 544 292 92 71 chr17 7424637 7424910 -78013570 + L1M4 LINE L1 4386 4673 -1473 2030 100 4 4 chr17 7424947 7425226 -78013254 + AluSc SINE Alu 1 279 -30 1728 108 8 4 chr17 7425239 7425498 -78012982 + AluSx SINE Alu 44 303 -9 1937 145 0 3 chr17 7425505 7425816 -78012664 + AluSx SINE Alu 1 310 -2 23 54 0 0 chr17 7425817 7425854 -78012626 + AT_rich Low_complexity Low_complexity 1 37 0 2102 107 13 13 chr17 7425919 7426229 -78012251 + AluSq SINE Alu 4 313 0 2308 102 0 9 chr17 7426416 7426731 -78011749 - AluSp SINE Alu -1 312 1 2001 142 0 3 chr17 7426735 7427044 -78011436 - AluSx SINE Alu -4 308 1 1992 147 0 0 chr17 7427152 7427451 -78011029 + AluSx SINE Alu 1 299 -13 2068 132 0 0 chr17 7427523 7427833 -78010647 + AluSx SINE Alu 1 310 -2 2160 105 10 3 chr17 7428231 7428535 -78009945 - AluSq SINE Alu -7 306 1 2241 75 3 23 chr17 7428581 7428886 -78009594 - AluSq SINE Alu -14 299 1 295 341 117 40 chr17 7428975 7429248 -78009232 + L2 LINE L2 3003 3296 -17 22 0 0 0 chr17 7429495 7429517 -78008963 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr17 7429847 7429875 -78008605 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2120 77 0 74 chr17 7430275 7430601 -78007879 + AluSp SINE Alu 1 302 -11 204 208 0 0 chr17 7430975 7431023 -78007457 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 212 162 0 0 chr17 7431863 7431900 -78006580 + (TG)n Simple_repeat Simple_repeat 2 38 0 751 111 19 0 chr17 7432708 7432816 -78005664 + FLAM_A SINE Alu 22 131 -11 314 231 108 39 chr17 7437110 7437240 -78001240 - L2 LINE L2 -10 3262 3124 2167 105 0 13 chr17 7437264 7437398 -78001082 + AluSg SINE Alu 1 135 -175 2295 56 13 20 chr17 7437398 7437701 -78000779 + AluY SINE Alu 1 301 -10 2167 105 0 13 chr17 7437701 7437872 -78000608 + AluSg SINE Alu 135 302 -8 1909 101 10 68 chr17 7437882 7438190 -78000290 + AluSq SINE Alu 1 290 -23 198 0 0 0 chr17 7438200 7438222 -78000258 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 478 395 47 13 chr17 7438252 7438551 -77999929 - L2 LINE L2 -345 2969 2661 656 189 20 59 chr17 7438551 7438659 -77999821 - MER45 DNA AcHobo 0 1581 1479 1928 126 40 3 chr17 7438659 7438960 -77999520 - AluSx SINE Alu 0 312 1 656 189 20 59 chr17 7438960 7439004 -77999476 - MER45 DNA AcHobo -102 1479 1435 1875 143 0 27 chr17 7439004 7439305 -77999175 - AluSx SINE Alu -18 294 2 325 222 37 37 chr17 7439314 7439395 -77999085 - AluJ SINE Alu -102 200 120 2404 70 0 0 chr17 7439419 7439717 -77998763 - AluSg SINE Alu -12 298 1 643 140 28 9 chr17 7439760 7439867 -77998613 - AluJ SINE Alu -195 117 9 1347 199 41 8 chr17 7439867 7440133 -77998347 - MER45B DNA AcHobo -425 615 341 1018 143 82 152 chr17 7440133 7440448 -77998032 - AluJo SINE Alu -7 305 13 1158 211 97 100 chr17 7440519 7440870 -77997610 - MER45B DNA AcHobo -690 350 1 2064 134 3 0 chr17 7441030 7441328 -77997152 - AluSx SINE Alu -13 299 1 238 272 247 19 chr17 7441384 7441450 -77997030 - L2 LINE L2 -93 3220 3170 1917 128 11 0 chr17 7441450 7441774 -77996706 - AluSx SINE Alu 0 327 1 238 272 247 19 chr17 7441774 7441864 -77996616 - L2 LINE L2 -143 3170 3027 2019 120 13 0 chr17 7441864 7442164 -77996316 - AluSx SINE Alu -8 304 1 499 184 23 0 chr17 7442169 7442256 -77996224 - FRAM SINE Alu -17 159 71 1096 149 80 0 chr17 7442578 7442766 -77995714 + AluSx SINE Alu 1 203 -109 520 82 27 0 chr17 7442766 7442839 -77995641 + AluSq/x SINE Alu 69 143 -170 1782 117 68 7 chr17 7442839 7443120 -77995360 + AluSg SINE Alu 1 298 -12 2246 88 3 0 chr17 7443120 7443414 -77995066 + AluSp SINE Alu 1 297 -16 2051 65 79 0 chr17 7443415 7443692 -77994788 + AluY SINE Alu 1 299 -12 1877 96 40 63 chr17 7443695 7443786 -77994694 + AluSx SINE Alu 1 93 -219 2290 81 7 0 chr17 7443786 7444095 -77994385 + AluSp SINE Alu 2 312 -1 1877 96 40 63 chr17 7444095 7444305 -77994175 + AluSx SINE Alu 93 295 -17 7059 110 177 90 chr17 7444981 7446541 -77991939 - pTR5 LTR ERV1 0 2438 743 866 139 0 13 chr17 7446674 7446832 -77991648 + L1MB3 LINE L1 5987 6142 -41 893 112 0 0 chr17 7446833 7446958 -77991522 + AluSg/x SINE Alu 173 297 -13 633 128 128 9 chr17 7446970 7447079 -77991401 + AluJb SINE Alu 3 124 -188 365 109 0 47 chr17 7447079 7447091 -77991389 + L1MB2 LINE L1 6111 6122 -49 1866 164 0 10 chr17 7447091 7447226 -77991254 + AluSx SINE Alu 1 136 -176 2069 77 60 0 chr17 7447226 7447511 -77990969 + AluSx SINE Alu 1 302 -10 1866 164 0 10 chr17 7447511 7447674 -77990806 + AluSx SINE Alu 136 296 -16 365 109 0 47 chr17 7447674 7447725 -77990755 + L1MB2 LINE L1 6122 6171 0 901 193 0 23 chr17 7447768 7447944 -77990536 + AluJo SINE Alu 1 172 -140 212 169 34 51 chr17 7447991 7448026 -77990454 + A-rich Low_complexity Low_complexity 2 36 -23 2077 127 3 3 chr17 7448026 7448325 -77990155 + AluSx SINE Alu 1 299 -13 2216 116 0 0 chr17 7448325 7448635 -77989845 + AluY SINE Alu 1 310 -1 212 169 34 51 chr17 7448635 7448657 -77989823 + A-rich Low_complexity Low_complexity 34 59 0 445 282 65 24 chr17 7448914 7449084 -77989396 - MIR SINE MIR -12 250 74 2095 128 0 3 chr17 7449090 7449403 -77989077 - AluSx SINE Alu 0 312 1 2226 116 0 0 chr17 7449517 7449819 -77988661 + AluSx SINE Alu 1 302 -10 2154 122 0 0 chr17 7449819 7450115 -77988365 + AluSx SINE Alu 1 296 -16 2304 78 0 0 chr17 7450115 7450411 -77988069 + AluY SINE Alu 1 296 -15 457 272 117 31 chr17 7450965 7451222 -77987258 + L2 LINE L2 2951 3229 -84 1402 61 4 2 chr17 7451224 7451488 -77986992 - AluY SINE Alu 0 311 2 335 243 0 0 chr17 7451488 7451558 -77986922 + L2 LINE L2 3179 3248 -24 2203 98 0 10 chr17 7451939 7452259 -77986221 - AluSx SINE Alu 0 312 1 2321 69 0 10 chr17 7452966 7453272 -77985208 + AluSq SINE Alu 1 303 -10 513 308 68 43 chr17 7453276 7453338 -77985142 + L2 LINE L2 3028 3087 -226 2447 64 0 3 chr17 7453338 7453650 -77984830 - AluY SINE Alu 0 311 1 513 308 68 43 chr17 7453650 7453866 -77984614 + L2 LINE L2 3087 3313 0 1566 164 27 7 chr17 7454793 7455091 -77983389 - AluJo SINE Alu -8 304 1 241 287 37 28 chr17 7456197 7456305 -77982175 + MIR SINE MIR 99 207 -55 195 129 0 0 chr17 7457019 7457050 -77981430 + (CAG)n Simple_repeat Simple_repeat 3 33 0 531 213 66 29 chr17 7457511 7457647 -77980833 + MIR SINE MIR 74 214 -48 369 0 0 0 chr17 7457839 7457880 -77980600 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 1747 140 0 18 chr17 7457880 7458165 -77980315 - AluSx SINE Alu -32 280 1 2242 100 0 0 chr17 7458177 7458478 -77980002 - AluSq SINE Alu -8 305 5 992 136 0 30 chr17 7458495 7458510 -77979970 + AluSg/x SINE Alu 122 136 -180 2140 112 3 10 chr17 7458510 7458824 -77979656 + AluSx SINE Alu 1 312 0 992 136 0 30 chr17 7458824 7459008 -77979472 + AluSg/x SINE Alu 136 316 0 2002 107 40 0 chr17 7461036 7461334 -77977146 - AluSg SINE Alu 0 310 1 2001 114 3 29 chr17 7461339 7461647 -77976833 - AluSq SINE Alu -13 300 1 2309 88 3 0 chr17 7461652 7461959 -77976521 - AluY SINE Alu -3 308 1 2264 98 3 0 chr17 7462007 7462312 -77976168 + AluSq SINE Alu 1 306 -7 1405 174 10 30 chr17 7462312 7462616 -77975864 + AluJb SINE Alu 15 312 0 * 1410 179 0 39 chr17 7462615 7462716 -77975764 + AluJb SINE Alu 27 130 -182 1972 122 28 0 chr17 7462716 7463004 -77975476 + AluSx SINE Alu 1 296 -16 1995 123 19 10 chr17 7463005 7463313 -77975167 + AluSx SINE Alu 1 311 -1 1410 179 0 39 chr17 7463313 7463494 -77974986 + AluJb SINE Alu 129 300 -12 1587 191 3 7 chr17 7463496 7463789 -77974691 + AluJb SINE Alu 1 292 -20 2060 112 10 0 chr17 7463849 7464145 -77974335 - AluSp SINE Alu -14 299 1 2244 81 0 26 chr17 7464199 7464508 -77973972 - AluY SINE Alu -10 301 1 2287 90 0 0 chr17 7464683 7464982 -77973498 + AluSx SINE Alu 1 299 -13 2218 91 0 26 chr17 7465111 7465418 -77973062 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 7465571 7465610 -77972870 + AT_rich Low_complexity Low_complexity 1 39 0 2235 93 0 19 chr17 7465631 7465941 -77972539 - AluSx SINE Alu -8 304 1 572 122 0 0 chr17 7465943 7466025 -77972455 - AluSq/x SINE Alu -176 136 55 370 191 44 0 chr17 7466049 7466117 -77972363 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1647 148 3 66 chr17 7466132 7466327 -77972153 - AluJo SINE Alu -1 311 105 1942 156 0 0 chr17 7466327 7466629 -77971851 + AluSq SINE Alu 3 304 -9 2066 123 0 13 chr17 7466637 7466946 -77971534 + AluSx SINE Alu 3 307 -5 1647 148 3 66 chr17 7466946 7467073 -77971407 - AluJo SINE Alu -214 98 1 812 231 0 0 chr17 7467151 7467311 -77971169 - FRAM SINE Alu -16 160 1 243 182 0 0 chr17 7467322 7467366 -77971114 + Alu SINE Alu 211 254 -48 1547 246 110 35 chr17 7467464 7467522 -77970958 - HAL1 LINE L1 -260 2247 2195 2188 92 7 16 chr17 7467522 7467825 -77970655 - AluSq SINE Alu -8 305 6 1547 246 110 35 chr17 7467825 7467850 -77970630 - HAL1 LINE L1 -312 2195 2173 2260 98 3 0 chr17 7467850 7468147 -77970333 - AluSp SINE Alu -15 298 1 1547 246 110 35 chr17 7468147 7468649 -77969831 - HAL1 LINE L1 -334 2173 1609 1799 136 0 106 chr17 7468649 7468979 -77969501 + AluSx SINE Alu 1 295 -7 1547 246 110 35 chr17 7468979 7469020 -77969460 - HAL1 LINE L1 -898 1609 1572 2095 111 0 14 chr17 7469022 7469319 -77969161 - AluSx SINE Alu -19 293 1 831 170 0 0 chr17 7469319 7469454 -77969026 - AluJb SINE Alu -177 135 1 295 246 0 56 chr17 7469480 7469622 -77968858 - HAL1 LINE L1 -1214 1293 1160 2075 97 32 32 chr17 7469624 7469935 -77968545 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 7469943 7469978 -77968502 + AT_rich Low_complexity Low_complexity 1 35 0 2162 113 0 3 chr17 7470291 7470600 -77967880 - AluSg SINE Alu -2 308 1 2202 71 0 55 chr17 7470604 7470930 -77967550 - AluY SINE Alu -3 308 1 1602 121 16 52 chr17 7470931 7471236 -77967244 - AluSc SINE Alu -15 294 1 824 116 31 0 chr17 7471236 7471365 -77967115 - AluJb SINE Alu -176 136 4 2002 76 3 99 chr17 7471395 7471737 -77966743 - AluSx SINE Alu -3 309 1 200 208 19 19 chr17 7472364 7472417 -77966063 + (CGG)n Simple_repeat Simple_repeat 2 54 0 188 197 0 16 chr17 7472430 7472491 -77965989 + (CGG)n Simple_repeat Simple_repeat 2 61 0 27 49 0 0 chr17 7472518 7472559 -77965921 + GC_rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr17 7472577 7472617 -77965863 + GC_rich Low_complexity Low_complexity 1 40 0 2483 52 0 3 chr17 7474233 7474541 -77963939 - AluY SINE Alu -4 307 1 2130 124 0 0 chr17 7475559 7475866 -77962614 - AluSx SINE Alu -1 311 5 257 260 14 0 chr17 7475998 7476071 -77962409 - U13 snRNA snRNA -26 78 5 994 162 9 90 chr17 7477086 7477211 -77961269 - AluSx SINE Alu -87 225 124 1032 156 0 0 chr17 7477211 7477391 -77961089 + (TA)n Simple_repeat Simple_repeat 1 180 0 994 162 9 90 chr17 7477391 7477487 -77960993 - AluSx SINE Alu -188 124 22 1178 186 0 9 chr17 7478115 7478335 -77960145 - AluJb SINE Alu 0 312 95 542 232 27 21 chr17 7478349 7478527 -77959953 - L1MA10 LINE L1 0 6334 5998 1465 177 9 78 chr17 7478610 7478944 -77959536 - AluSx SINE Alu -1 311 1 244 148 93 0 chr17 7478945 7478999 -77959481 + L1M4 LINE L1 4889 4947 -1199 836 158 8 0 chr17 7479002 7479129 -77959351 + FLAM_C SINE Alu 2 129 -14 23 0 0 0 chr17 7479129 7479152 -77959328 + AT_rich Low_complexity Low_complexity 1 23 0 639 194 8 97 chr17 7479152 7479165 -77959315 + L1M4 LINE L1 4942 4955 -1191 2031 106 16 19 chr17 7479165 7479477 -77959003 + AluSp SINE Alu 1 311 -2 639 194 8 97 chr17 7479477 7479529 -77958951 + L1M4 LINE L1 4955 5010 -1136 2000 118 7 3 chr17 7479529 7479818 -77958662 + AluSx SINE Alu 1 290 -22 639 194 8 97 chr17 7479818 7479907 -77958573 + L1M4 LINE L1 5010 5070 -1076 2297 103 3 0 chr17 7479907 7480219 -77958261 - AluSq SINE Alu 0 313 1 639 194 8 97 chr17 7480219 7480310 -77958170 + L1M4 LINE L1 5070 5167 -979 2011 128 3 0 chr17 7481858 7482169 -77956311 - AluSx SINE Alu 0 312 1 2296 92 0 3 chr17 7482233 7482536 -77955944 + AluSq SINE Alu 1 302 -11 2006 120 17 0 chr17 7482551 7482842 -77955638 - AluSx SINE Alu -16 296 1 827 193 73 73 chr17 7482890 7483108 -77955372 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 7483698 7484010 -77954470 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 7484056 7484191 -77954289 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 7484507 7484675 -77953805 - AluSg SINE Alu -11 299 148 2249 78 0 14 chr17 7484675 7484971 -77953509 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 7484971 7485114 -77953366 - AluSg SINE Alu -162 148 1 2190 105 0 0 chr17 7485315 7485609 -77952871 - AluSc SINE Alu -15 294 1 2144 110 3 0 chr17 7486057 7486358 -77952122 - AluSx SINE Alu -10 302 1 2008 132 0 0 chr17 7486364 7486652 -77951828 - AluSg SINE Alu -22 288 1 473 203 0 0 chr17 7486653 7486732 -77951748 - AluJ/FLAM SINE Alu -225 87 9 1749 116 53 32 chr17 7486767 7487051 -77951429 + AluSp SINE Alu 5 294 -19 2335 71 0 3 chr17 7487057 7487352 -77951128 + AluSq SINE Alu 1 294 -19 2046 125 13 3 chr17 7487357 7487661 -77950819 - AluSx SINE Alu -5 307 1 1735 177 3 25 chr17 7487925 7488104 -77950376 - AluSx SINE Alu -2 310 139 1751 146 38 0 chr17 7488104 7488392 -77950088 - AluSx SINE Alu -13 299 1 1735 177 3 25 chr17 7488392 7488529 -77949951 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 7488532 7488624 -77949856 - AluSg/x SINE Alu -4 305 214 418 297 195 31 chr17 7488624 7488771 -77949709 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 7488771 7489087 -77949393 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 7489087 7489261 -77949219 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 7489270 7489547 -77948933 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 7489547 7489777 -77948703 + AluSx SINE Alu 1 305 -4 2020 122 3 0 chr17 7490149 7490435 -77948045 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 7490604 7490727 -77947753 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 7490798 7491096 -77947384 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 7491510 7491800 -77946680 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 7491806 7491974 -77946506 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 7491975 7492085 -77946395 - AluJo/FLAM SINE Alu -197 115 2 1574 148 3 96 chr17 7492111 7492455 -77946025 - AluSx SINE Alu 0 312 1 2252 72 24 0 chr17 7500801 7501091 -77937389 - AluSq SINE Alu -16 297 1 2115 124 0 3 chr17 7501703 7502001 -77936479 - AluSx SINE Alu -15 297 1 2382 71 0 3 chr17 7502237 7502545 -77935935 - AluSq SINE Alu -6 307 1 1839 77 26 89 chr17 7505301 7505614 -77932866 - AluSx SINE Alu -19 293 1 202 203 25 25 chr17 7507240 7507319 -77931161 + (TGG)n Simple_repeat Simple_repeat 1 79 0 1752 160 38 3 chr17 7510073 7510366 -77928114 - AluJo SINE Alu -9 303 1 798 247 34 38 chr17 7510412 7510472 -77928008 + L1M4 LINE L1 3554 3613 -2533 2051 129 23 3 chr17 7510472 7510774 -77927706 + AluSx SINE Alu 1 308 -4 798 247 34 38 chr17 7510774 7510946 -77927534 + L1M4 LINE L1 3613 3787 -2359 2325 109 0 13 chr17 7510946 7511082 -77927398 + AluSx SINE Alu 1 137 -175 2351 83 14 0 chr17 7511082 7511372 -77927108 + AluSg SINE Alu 1 294 -16 2325 109 0 13 chr17 7511372 7511547 -77926933 + AluSx SINE Alu 137 308 -4 798 247 34 38 chr17 7511547 7511605 -77926875 + L1M4 LINE L1 3787 3844 -2302 705 162 8 0 chr17 7511607 7511724 -77926756 + FLAM_C SINE Alu 2 119 -24 919 229 56 102 chr17 7511733 7511961 -77926519 + L1M4 LINE L1 3839 4076 -2070 2431 73 6 19 chr17 7511961 7512275 -77926205 + AluY SINE Alu 2 311 0 919 229 56 102 chr17 7512275 7512382 -77926098 + L1M4 LINE L1 4076 4186 -1960 2583 59 3 0 chr17 7512382 7512688 -77925792 + AluY SINE Alu 1 307 -4 1997 127 0 46 chr17 7512696 7512838 -77925642 + AluSq SINE Alu 6 153 -160 2436 78 3 3 chr17 7512838 7513134 -77925346 + AluSq SINE Alu 1 296 -17 1997 127 0 46 chr17 7513134 7513314 -77925166 + AluSq SINE Alu 153 313 0 919 229 56 102 chr17 7513314 7513388 -77925092 + L1M4 LINE L1 4193 4269 -1877 1787 106 64 8 chr17 7513388 7513651 -77924829 + AluSq SINE Alu 1 278 -35 2156 106 19 44 chr17 7513651 7513971 -77924509 + AluSx SINE Alu 1 312 0 919 229 56 102 chr17 7513652 7514048 -77924432 + L1M4 LINE L1 4269 4313 -1833 806 168 59 77 chr17 7514048 7514268 -77924212 + MER2 DNA MER2_type 2 217 -128 228 241 35 0 chr17 7514762 7514820 -77923660 - MIR SINE MIR -3 259 200 1992 128 14 3 chr17 7514847 7515179 -77923301 + AluSq SINE Alu 1 313 0 2443 80 13 0 chr17 7515243 7515544 -77922936 + AluSp SINE Alu 1 305 -8 1051 165 46 21 chr17 7515654 7515706 -77922774 + AluJo SINE Alu 85 134 -174 2258 117 0 16 chr17 7515706 7516023 -77922457 + AluSx SINE Alu 1 312 0 1051 165 46 21 chr17 7516023 7516189 -77922291 + AluJo SINE Alu 134 308 0 2165 125 6 0 chr17 7516196 7516507 -77921973 + AluSq SINE Alu 1 313 0 360 242 96 45 chr17 7516652 7516850 -77921630 - L2 LINE L2 -17 3296 3089 2216 118 3 0 chr17 7517221 7517517 -77920963 + AluSx SINE Alu 1 297 -15 199 268 134 45 chr17 7517518 7517697 -77920783 - L2 LINE L2 -1810 1504 1310 2024 143 0 16 chr17 7518740 7519047 -77919433 + AluJb SINE Alu 1 302 -10 184 283 33 54 chr17 7519669 7519761 -77918719 - MIR SINE MIR -70 192 103 2441 60 7 13 chr17 7519775 7520074 -77918406 + AluY SINE Alu 1 297 -14 729 108 15 54 chr17 7521164 7521294 -77917186 - MER47A DNA MER2_type 0 366 242 2252 95 0 47 chr17 7521294 7521611 -77916869 - AluSg SINE Alu -8 302 1 1204 179 28 14 chr17 7521623 7521841 -77916639 - AluJo SINE Alu -11 301 81 928 163 0 25 chr17 7521849 7522009 -77916471 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 7522009 7522047 -77916433 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2145 85 7 11 chr17 7522047 7522330 -77916150 - AluSg SINE Alu -28 282 1 1631 192 31 3 chr17 7522332 7522624 -77915856 - AluJo SINE Alu -12 300 1 884 136 0 26 chr17 7522624 7522779 -77915701 - MER47A DNA MER2_type -116 250 100 2327 84 14 0 chr17 7522841 7523138 -77915342 + AluSx SINE Alu 1 301 -11 693 176 0 24 chr17 7523141 7523266 -77915214 + FLAM_A SINE Alu 5 126 -7 1717 161 28 3 chr17 7523267 7523558 -77914922 + AluSx SINE Alu 1 298 -14 441 245 0 19 chr17 7523573 7523679 -77914801 - MER47A DNA MER2_type -259 107 4 2260 83 23 13 chr17 7524236 7524538 -77913942 + AluSp SINE Alu 1 305 -8 242 320 58 10 chr17 7525192 7525295 -77913185 + MIR SINE MIR 110 217 -45 1936 153 10 0 chr17 7525587 7525887 -77912593 - AluJb SINE Alu -2 310 8 507 133 88 0 chr17 7526548 7526661 -77911819 - AluSq/x SINE Alu -190 123 1 708 326 96 16 chr17 7526667 7527041 -77911439 - L2 LINE L2 -18 3295 2892 2124 125 7 3 chr17 7527041 7527344 -77911136 + AluSx SINE Alu 1 304 -8 255 321 104 25 chr17 7527356 7527448 -77911032 + L2 LINE L2 1826 1909 -1405 2375 54 44 7 chr17 7527448 7527742 -77910738 - AluY SINE Alu -6 305 1 255 321 104 25 chr17 7527742 7527889 -77910591 + L2 LINE L2 1909 2084 -1230 286 286 0 0 chr17 7527960 7528023 -77910457 - L2 LINE L2 -2069 1245 1183 501 221 21 97 chr17 7528043 7528138 -77910342 + MIR SINE MIR 122 204 -58 2315 107 7 3 chr17 7528138 7528446 -77910034 + AluSx SINE Alu 1 309 -3 501 221 21 97 chr17 7528446 7528495 -77909985 + MIR SINE MIR 204 255 -7 196 288 25 25 chr17 7528558 7528638 -77909842 - L2 LINE L2 -2227 1087 1008 1160 80 7 20 chr17 7528702 7528852 -77909628 + AluSq/x SINE Alu 1 148 -165 27 49 0 0 chr17 7528862 7528903 -77909577 + AT_rich Low_complexity Low_complexity 1 41 0 2166 121 13 19 chr17 7528927 7529241 -77909239 - AluSx SINE Alu 0 312 1 907 193 73 73 chr17 7529289 7529507 -77908973 - AluJo SINE Alu -94 218 1 2592 80 3 0 chr17 7530097 7530409 -77908071 - AluSp SINE Alu 0 313 1 796 170 0 15 chr17 7530455 7530590 -77907890 - FLAM_C SINE Alu 0 133 1 2412 74 0 42 chr17 7530906 7531074 -77907406 - AluSg SINE Alu -11 299 148 2399 74 0 14 chr17 7531074 7531370 -77907110 - AluSg SINE Alu -17 293 2 2412 74 0 42 chr17 7531370 7531513 -77906967 - AluSg SINE Alu -162 148 1 2173 128 3 3 chr17 7531714 7532011 -77906469 - AluSx SINE Alu -15 297 1 1855 177 3 25 chr17 7532275 7532454 -77906026 - AluSx SINE Alu -2 310 139 1857 146 38 0 chr17 7532454 7532741 -77905739 - AluSx SINE Alu -14 298 1 1855 177 3 25 chr17 7532741 7532878 -77905602 - AluSx SINE Alu -173 139 1 550 141 0 0 chr17 7532881 7532973 -77905507 - AluSg/x SINE Alu -4 305 214 399 288 198 34 chr17 7532973 7533120 -77905360 - L2 LINE L2 -430 2884 2762 2347 59 0 17 chr17 7533120 7533436 -77905044 - AluY SINE Alu 0 311 1 399 288 198 34 chr17 7533436 7533610 -77904870 - L2 LINE L2 -552 2762 2509 772 190 27 15 chr17 7533619 7533896 -77904584 + MER21B LTR ERV1 1 316 -547 566 110 26 3 chr17 7533896 7534126 -77904354 + AluSx SINE Alu 1 305 -4 2148 122 3 0 chr17 7534498 7534784 -77903696 - AluSc SINE Alu -22 287 1 203 252 89 98 chr17 7534953 7535076 -77903404 - MIR SINE MIR -64 144 23 2348 101 0 0 chr17 7535147 7535445 -77903035 + AluSx SINE Alu 1 298 -14 1298 159 110 69 chr17 7535859 7536149 -77902331 + AluJo SINE Alu 3 304 -8 680 163 52 99 chr17 7536151 7536323 -77902157 + AluJb SINE Alu 134 297 -15 507 236 36 0 chr17 7536324 7536434 -77902046 - AluJo/FLAM SINE Alu -197 115 2 1680 151 3 96 chr17 7536460 7536804 -77901676 - AluSx SINE Alu 0 312 1 1949 134 7 0 chr17 7537466 7537750 -77900730 - AluSx SINE Alu -26 286 1 1626 160 93 0 chr17 7537782 7538051 -77900429 + AluJo SINE Alu 6 299 -13 2467 54 0 10 chr17 7538166 7538461 -77900019 - AluY SINE Alu -19 292 1 274 315 35 54 chr17 7538909 7539112 -77899368 + L2 LINE L2 2431 2629 -685 324 293 32 75 chr17 7539265 7539453 -77899027 - L2 LINE L2 -189 3083 2904 2664 52 0 0 chr17 7539497 7539804 -77898676 - AluY SINE Alu -4 307 1 372 298 113 36 chr17 7539890 7540138 -77898342 - L2 LINE L2 -785 2529 2263 344 272 28 51 chr17 7540219 7540245 -77898235 + L1ME3A LINE L1 5278 5303 -2505 2453 97 3 0 chr17 7540245 7540556 -77897924 + AluSx SINE Alu 1 312 0 344 272 28 51 chr17 7540556 7540584 -77897896 + L1ME3A LINE L1 5303 5330 -2478 2181 134 7 3 chr17 7540584 7540891 -77897589 + AluSx SINE Alu 1 308 -4 344 272 28 51 chr17 7540891 7541052 -77897428 + L1ME3A LINE L1 5330 5489 -2319 1307 180 9 0 chr17 7541077 7541288 -77897192 - AluJo SINE Alu -15 297 85 419 324 99 17 chr17 7541288 7541581 -77896899 + L1ME3A LINE L1 5517 5833 -337 1549 163 19 70 chr17 7541656 7541802 -77896678 + AluJo SINE Alu 1 153 -159 2173 93 4 7 chr17 7541802 7542080 -77896400 + AluSg1 SINE Alu 1 277 -32 306 0 0 0 chr17 7542082 7542116 -77896364 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1549 163 19 70 chr17 7542116 7542279 -77896201 + AluJo SINE Alu 154 297 -15 2014 132 4 4 chr17 7542344 7542625 -77895855 + AluSx SINE Alu 1 281 -31 1991 124 3 26 chr17 7542974 7543280 -77895200 + AluSq SINE Alu 1 299 -14 2098 144 0 3 chr17 7543326 7543631 -77894849 + AluSx SINE Alu 1 304 -8 2359 88 0 26 chr17 7543639 7543946 -77894534 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 7544099 7544138 -77894342 + AT_rich Low_complexity Low_complexity 1 39 0 2277 110 0 16 chr17 7544159 7544467 -77894013 - AluSx SINE Alu -9 303 1 532 122 0 0 chr17 7544469 7544551 -77893929 - AluSq/x SINE Alu -177 136 55 363 191 44 0 chr17 7544575 7544643 -77893837 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1747 149 3 67 chr17 7544658 7544850 -77893630 - AluJo SINE Alu -4 308 105 2070 156 0 0 chr17 7544850 7545152 -77893328 + AluSq SINE Alu 3 304 -9 2197 123 0 13 chr17 7545160 7545469 -77893011 + AluSx SINE Alu 3 307 -5 1747 149 3 67 chr17 7545469 7545596 -77892884 - AluJo SINE Alu -214 98 1 207 209 0 0 chr17 7545616 7545659 -77892821 + T-rich Low_complexity Low_complexity 1 43 0 873 228 0 0 chr17 7545677 7545835 -77892645 - FRAM SINE Alu -18 158 1 238 182 0 0 chr17 7545846 7545890 -77892590 + Alu SINE Alu 211 254 -48 234 264 0 0 chr17 7545899 7545952 -77892528 - HAL1 LINE L1 -213 2294 2242 2324 92 7 16 chr17 7546046 7546349 -77892131 - AluSq SINE Alu -8 305 6 2420 91 3 0 chr17 7546374 7546671 -77891809 - AluSp SINE Alu -15 298 1 883 170 0 0 chr17 7546671 7546806 -77891674 - AluJb SINE Alu -177 135 1 335 228 0 102 chr17 7546807 7546974 -77891506 - HAL1 LINE L1 -1198 1309 1160 2217 97 32 32 chr17 7546976 7547287 -77891193 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 7547295 7547330 -77891150 + AT_rich Low_complexity Low_complexity 1 35 0 2300 94 0 3 chr17 7547665 7547952 -77890528 - AluSg SINE Alu -24 286 1 2367 71 0 43 chr17 7547956 7548278 -77890202 - AluY SINE Alu -3 308 1 1721 115 20 56 chr17 7548279 7548584 -77889896 - AluSc SINE Alu -15 294 1 713 119 56 0 chr17 7548584 7548710 -77889770 - AluJb SINE Alu -176 136 4 205 231 11 22 chr17 7548839 7548930 -77889550 + G-rich Low_complexity Low_complexity 5 94 0 405 174 0 0 chr17 7549504 7549573 -77888907 - AluS SINE Alu -239 70 2 207 191 44 0 chr17 7549666 7549734 -77888746 + (TA)n Simple_repeat Simple_repeat 2 72 0 328 300 94 65 chr17 7549744 7549904 -77888576 + L1M4 LINE L1 4225 4379 -1767 2147 144 7 0 chr17 7549904 7550210 -77888270 + AluSx SINE Alu 1 308 -4 328 300 94 65 chr17 7550210 7550436 -77888044 + L1M4 LINE L1 4379 4622 -1524 2159 100 4 4 chr17 7550520 7550799 -77887681 + AluSc SINE Alu 1 279 -30 1836 108 8 4 chr17 7550812 7551071 -77887409 + AluSx SINE Alu 44 303 -9 2117 129 0 3 chr17 7551078 7551373 -77887107 + AluSx SINE Alu 1 294 -18 1448 137 15 0 chr17 7551929 7552133 -77886347 - AluSx SINE Alu -105 207 1 948 49 21 0 chr17 7552137 7552280 -77886200 + (TCTA)n Simple_repeat Simple_repeat 1 146 0 413 190 60 0 chr17 7552280 7552380 -77886100 - FLAM_C SINE Alu -27 116 11 2194 116 0 3 chr17 7552382 7552676 -77885804 - AluSx SINE Alu -19 293 1 1427 239 106 20 chr17 7552676 7553178 -77885302 + HAL1 LINE L1 1600 2144 -363 477 139 0 13 chr17 7553180 7553259 -77885221 + AluS SINE Alu 2 79 -233 480 179 0 0 chr17 7553547 7553631 -77884849 + AluJ/FRAM SINE Alu 216 299 -13 1200 193 10 0 chr17 7553746 7553953 -77884527 - AluJo SINE Alu -19 293 85 212 286 236 11 chr17 7555392 7555574 -77882906 + L2 LINE L2 2492 2714 -600 1285 117 0 48 chr17 7555579 7555767 -77882713 + AluSc SINE Alu 1 179 -130 332 198 77 11 chr17 7755829 7755920 -77682560 - U6 snRNA snRNA -9 98 2 369 330 131 44 chr17 7755961 7756486 -77681994 + L2 LINE L2 2524 3182 -90 2239 119 0 13 chr17 7756486 7756796 -77681684 - AluSc SINE Alu -3 306 1 369 330 131 44 chr17 7756796 7756872 -77681608 + L2 LINE L2 3182 3250 -22 595 229 150 9 chr17 7757090 7757101 -77681379 + L1MB2 LINE L1 5892 5900 -271 1927 170 0 0 chr17 7757101 7757407 -77681073 + AluJb SINE Alu 1 306 -6 595 229 150 9 chr17 7757407 7757622 -77680858 + L1MB2 LINE L1 5900 6150 -21 2230 98 0 7 chr17 7757631 7757918 -77680562 - AluY SINE Alu -26 285 1 861 157 0 0 chr17 7758263 7758384 -77680096 - FLAM_C SINE Alu -22 121 1 702 253 54 5 chr17 7758575 7758761 -77679719 + MIR SINE MIR 67 261 -1 2130 126 7 0 chr17 7759019 7759312 -77679168 - AluSx SINE Alu -17 295 1 229 281 62 42 chr17 7759802 7759898 -77678582 - MIR SINE MIR -6 256 159 800 277 210 12 chr17 7760118 7760699 -77677781 + L2 LINE L2 1889 2584 -730 214 210 0 32 chr17 7761902 7761964 -77676516 + C-rich Low_complexity Low_complexity 6 65 0 22 56 0 0 chr17 7762069 7762105 -77676375 + AT_rich Low_complexity Low_complexity 1 36 0 2228 124 0 0 chr17 7762240 7762539 -77675941 + AluJb SINE Alu 13 311 -1 745 177 0 8 chr17 7762802 7762932 -77675548 + FLAM_A SINE Alu 13 141 -1 2305 85 3 0 chr17 7762952 7763255 -77675225 - AluSp SINE Alu 0 304 1 241 259 50 29 chr17 7763911 7764050 -77674430 + HAL1b LINE L1 152 293 -1055 328 270 0 11 chr17 7764096 7764185 -77674295 + L1MC4 LINE L1 7444 7531 -511 498 77 15 0 chr17 7764300 7764365 -77674115 - AluS SINE Alu -246 67 2 1647 194 41 6 chr17 7764366 7764711 -77673769 + MER21B LTR ERV1 447 803 -60 2070 99 59 6 chr17 7764717 7764784 -77673696 - MER2 DNA MER2_type 0 345 283 2319 74 0 42 chr17 7764784 7765096 -77673384 + AluSx SINE Alu 3 301 -11 2070 99 59 6 chr17 7765096 7765351 -77673129 - MER2 DNA MER2_type -62 283 6 225 184 0 0 chr17 7765354 7765392 -77673088 + MER21B LTR ERV1 815 852 -11 211 341 0 31 chr17 7765910 7766039 -77672441 + G-rich Low_complexity Low_complexity 4 128 0 619 303 101 0 chr17 7766332 7766550 -77671930 + MIR SINE MIR 3 242 -20 1972 163 0 0 chr17 7766582 7766888 -77671592 + AluJb SINE Alu 1 306 -6 2551 79 0 0 chr17 7767102 7767406 -77671074 - AluSq SINE Alu -4 309 6 337 272 97 61 chr17 7768104 7768218 -77670262 - MIR SINE MIR -122 140 23 1861 125 96 0 chr17 7768295 7768575 -77669905 - AluJo SINE Alu 0 312 6 1107 80 12 19 chr17 7768589 7768751 -77669729 - L1PA13 LINE L1 0 6163 6003 2045 114 4 4 chr17 7768820 7769100 -77669380 + AluSx SINE Alu 1 280 -32 2274 105 0 38 chr17 7769501 7769815 -77668665 + AluSx SINE Alu 1 302 -10 526 160 0 75 chr17 7771605 7771711 -77666769 + FLAM_A SINE Alu 1 98 -44 2082 93 0 25 chr17 7771879 7772159 -77666321 - AluSx SINE Alu -39 273 1 22 0 0 0 chr17 7772159 7772181 -77666299 + AT_rich Low_complexity Low_complexity 1 22 0 876 187 0 13 chr17 7772473 7772646 -77665834 - AluSg/x SINE Alu 0 304 134 2388 104 0 3 chr17 7772972 7773279 -77665201 - AluSx SINE Alu -6 306 1 524 218 88 41 chr17 7773417 7773564 -77664916 + MIR SINE MIR 20 173 -89 2091 119 25 0 chr17 7773850 7774136 -77664344 + AluSx SINE Alu 6 298 -14 1149 145 36 54 chr17 7775017 7775238 -77663242 - AluJo SINE Alu -5 307 91 2085 103 65 14 chr17 7775253 7775544 -77662936 - AluSx SINE Alu -6 306 1 487 229 109 18 chr17 7775740 7775920 -77662560 + MIR SINE MIR 17 212 -50 346 288 45 51 chr17 7776003 7776087 -77662393 - L2 LINE L2 -177 3095 3012 2487 75 3 0 chr17 7776087 7776393 -77662087 - AluY SINE Alu -4 307 1 346 288 45 51 chr17 7776393 7776485 -77661995 - L2 LINE L2 -260 3012 2920 467 273 12 62 chr17 7776559 7776720 -77661760 - MIR SINE MIR -62 200 48 2283 85 0 42 chr17 7776739 7776910 -77661570 - AluSg SINE Alu -16 294 117 180 0 0 0 chr17 7776910 7776930 -77661550 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2226 69 44 0 chr17 7776931 7777205 -77661275 - AluY SINE Alu -25 286 1 2283 85 0 42 chr17 7777205 7777338 -77661142 - AluSg SINE Alu -192 118 1 2029 159 0 3 chr17 7778213 7778521 -77659959 - AluSx SINE Alu -5 307 1 189 0 0 0 chr17 7778542 7778563 -77659917 + (T)n Simple_repeat Simple_repeat 1 21 0 1115 106 0 4 chr17 7778600 7778817 -77659663 - AluJb SINE Alu -10 302 2 2264 101 10 0 chr17 7779378 7779675 -77658805 + AluSx SINE Alu 1 300 -12 2181 83 0 0 chr17 7779933 7780199 -77658281 - AluSx SINE Alu -46 266 1 336 298 48 36 chr17 7780199 7780367 -77658113 - L1MC4a LINE L1 -1916 5892 5723 23 0 0 0 chr17 7780413 7780436 -77658044 + AT_rich Low_complexity Low_complexity 1 23 0 379 290 142 12 chr17 7780445 7780614 -77657866 - MIR3 SINE MIR -4 204 14 556 165 119 0 chr17 7781165 7781274 -77657206 - FLAM_C SINE Alu -17 126 5 277 121 0 35 chr17 7781283 7781341 -77657139 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 2189 134 0 3 chr17 7781341 7781654 -77656826 - AluJb SINE Alu 0 312 1 2203 109 0 0 chr17 7781666 7781978 -77656502 - AluSx SINE Alu 0 312 1 268 267 67 0 chr17 7782018 7782093 -77656387 + MER5B DNA MER1_type 61 140 -38 1704 208 58 3 chr17 7782767 7783113 -77655367 - MLT1A1 LTR MaLR 0 365 1 782 293 150 49 chr17 7783363 7783851 -77654629 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 7783851 7783880 -77654600 + AT_rich Low_complexity Low_complexity 1 29 0 595 155 0 2 chr17 7783883 7784147 -77654333 + AluSx SINE Alu 1 312 0 252 221 15 0 chr17 7784584 7784652 -77653828 + HAL1 LINE L1 840 908 -1599 824 197 152 26 chr17 7784666 7784975 -77653505 + HAL1 LINE L1 1581 1928 -579 529 133 13 0 chr17 7785081 7785156 -77653324 + AluS SINE Alu 2 77 -235 2311 92 0 7 chr17 7785254 7785549 -77652931 - AluSg SINE Alu -17 293 1 420 284 49 11 chr17 7785550 7785733 -77652747 + HAL1 LINE L1 2029 2218 -289 2540 81 3 0 chr17 7785916 7786226 -77652254 - AluSp SINE Alu -2 311 1 1907 158 3 3 chr17 7786457 7786760 -77651720 + AluJb SINE Alu 1 303 -9 352 242 25 50 chr17 7787822 7787983 -77650497 + L1MC4a LINE L1 5734 5890 -1918 709 112 103 26 chr17 7787988 7788104 -77650376 + FLAM_C SINE Alu 5 129 -4 1562 136 17 4 chr17 7788223 7788458 -77650022 - AluJb SINE Alu -74 238 1 347 160 140 0 chr17 7788461 7788561 -77649919 - Charlie5 DNA MER1_type -76 2536 2423 1952 134 35 0 chr17 7788573 7788856 -77649624 - AluSx SINE Alu -19 293 1 2306 141 19 8 chr17 7789551 7789912 -77648568 - MLT1A1 LTR MaLR 0 365 1 865 211 30 20 chr17 7789978 7790140 -77648340 - MER3 DNA MER1_type 0 209 43 406 101 159 0 chr17 7790140 7790209 -77648271 + MADE1 DNA Mariner 1 80 0 865 211 30 20 chr17 7790209 7790245 -77648235 - MER3 DNA MER1_type -166 43 9 332 281 88 77 chr17 7791846 7791904 -77646576 - L1M4 LINE L1 -1670 4476 4420 387 41 0 0 chr17 7791904 7791953 -77646527 + (CA)n Simple_repeat Simple_repeat 2 50 0 332 281 88 77 chr17 7791953 7792154 -77646326 - L1M4 LINE L1 -1726 4420 4214 2646 40 0 0 chr17 7792186 7792482 -77645998 + AluY SINE Alu 1 296 -15 756 194 35 6 chr17 7792617 7792787 -77645693 + Charlie8 DNA MER1_type 75 249 -2168 582 297 110 78 chr17 7792898 7793424 -77645056 - L2 LINE L2 -818 2496 1929 2337 103 0 0 chr17 7793424 7793726 -77644754 + AluSx SINE Alu 2 303 -9 582 297 110 78 chr17 7793726 7794070 -77644410 - L2 LINE L2 -1385 1929 1598 475 326 91 50 chr17 7794748 7795186 -77643294 - L2 LINE L2 -1756 1558 1103 2593 59 0 7 chr17 7796086 7796393 -77642087 - AluY SINE Alu -6 305 1 1661 103 0 4 chr17 7796436 7796678 -77641802 - Tigger5 DNA MER2_type -31 2292 2052 271 136 0 0 chr17 7796674 7796718 -77641762 - Tigger5 DNA MER2_type -2265 58 15 * 27 49 0 0 chr17 7796763 7796804 -77641676 + AT_rich Low_complexity Low_complexity 1 41 0 2045 138 3 10 chr17 7796899 7797199 -77641281 - AluJb SINE Alu -16 296 1 203 360 140 18 chr17 7797232 7797346 -77641134 + L2 LINE L2 3181 3308 -5 2357 81 0 0 chr17 7797908 7798205 -77640275 - AluSx SINE Alu -15 297 1 418 329 24 44 chr17 7798569 7798821 -77639659 + L2 LINE L2 2511 2757 -557 879 152 0 0 chr17 7798944 7799076 -77639404 - FLAM_C SINE Alu -1 132 1 2124 107 3 0 chr17 7799088 7799378 -77639102 - AluSx SINE Alu -19 293 3 1813 115 4 4 chr17 7799481 7799741 -77638739 - AluSq SINE Alu -53 260 1 1833 146 28 0 chr17 7800098 7800385 -77638095 - AluJb SINE Alu -17 295 1 1539 177 89 0 chr17 7800568 7800735 -77637745 - AluJb SINE Alu -5 307 156 189 0 0 0 chr17 7800735 7800756 -77637724 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1539 177 89 0 chr17 7800756 7800870 -77637610 - AluJb SINE Alu -156 156 1 2223 85 13 3 chr17 7800929 7801234 -77637246 - AluSq SINE Alu -5 308 1 332 313 55 0 chr17 7801246 7801485 -77636995 - L1ME3A LINE L1 -295 5875 5677 1048 26 45 7 chr17 7803297 7803451 -77635029 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 812 155 14 7 chr17 7803485 7803627 -77634853 - AluJo SINE Alu -169 143 1 421 220 10 10 chr17 7804509 7804609 -77633871 + MER96B DNA MER1_type? 1 100 -317 1837 135 0 0 chr17 7804612 7804879 -77633601 - AluSx SINE Alu -6 306 40 806 189 22 22 chr17 7805032 7805254 -77633226 - MER96B DNA MER1_type? -97 320 99 1674 154 0 4 chr17 7805254 7805513 -77632967 + AluJb SINE Alu 1 258 -54 313 70 35 0 chr17 7805514 7805571 -77632909 + (TA)n Simple_repeat Simple_repeat 2 60 0 1573 107 9 5 chr17 7805578 7805802 -77632678 + AluSp SINE Alu 1 225 -88 1150 148 0 0 chr17 7807262 7807438 -77631042 - AluSg/x SINE Alu 0 312 137 2327 90 0 0 chr17 7807438 7807739 -77630741 - AluSx SINE Alu -11 301 1 2132 108 3 10 chr17 7808260 7808566 -77629914 - AluSx SINE Alu -8 304 1 662 169 54 0 chr17 7808576 7808724 -77629756 - L1MB7 LINE L1 0 6184 6029 1566 220 72 2 chr17 7808799 7809199 -77629281 - L1MB5 LINE L1 -154 6020 5593 2455 74 0 3 chr17 7809218 7809530 -77628950 - AluY SINE Alu 0 311 1 2223 106 3 0 chr17 7809530 7809831 -77628649 - AluSx SINE Alu -9 303 1 1289 100 0 0 chr17 7810571 7810741 -77627739 - AluSx SINE Alu -142 170 1 390 271 23 97 chr17 7810742 7810801 -77627679 - L1MB5 LINE L1 -749 5397 5335 2049 96 0 59 chr17 7810801 7811104 -77627376 - AluSg SINE Alu -25 285 1 390 271 23 97 chr17 7811104 7811245 -77627235 - L1MB5 LINE L1 -811 5335 5244 2123 109 0 0 chr17 7811350 7811661 -77626819 - AluSx SINE Alu 0 311 1 2230 99 3 0 chr17 7811663 7811957 -77626523 - AluSx SINE Alu -17 295 1 225 0 0 0 chr17 7812257 7812282 -77626198 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 369 363 73 26 chr17 7812750 7812826 -77625654 - L2 LINE L2 -22 3250 3179 2363 81 0 13 chr17 7812826 7813136 -77625344 + AluSc SINE Alu 1 306 -3 369 363 73 26 chr17 7813136 7813362 -77625118 - L2 LINE L2 -93 3179 2934 683 189 0 0 chr17 7813522 7813633 -77624847 - FLAM_C SINE Alu -32 111 1 198 0 0 0 chr17 7813654 7813676 -77624804 + (T)n Simple_repeat Simple_repeat 1 22 0 1105 101 0 4 chr17 7813712 7813930 -77624550 - AluJb SINE Alu -10 302 1 2382 87 0 3 chr17 7814638 7814948 -77623532 - AluSc SINE Alu 0 309 1 3359 172 33 57 chr17 7815471 7815512 -77622968 - L1MB5 LINE L1 0 6174 6134 2196 113 0 7 chr17 7815512 7815821 -77622659 - AluSx SINE Alu -5 307 1 3359 172 33 57 chr17 7815821 7816600 -77621880 - L1MB5 LINE L1 -40 6134 5374 3486 149 35 20 chr17 7817291 7817893 -77620587 - L1MA8 LINE L1 -1 6290 5680 2032 133 0 13 chr17 7818025 7818333 -77620147 - AluSx SINE Alu -8 304 1 509 317 70 10 chr17 7818340 7818539 -77619941 - L1MB5 LINE L1 -964 5182 4972 23 33 0 0 chr17 7818570 7818600 -77619880 + AT_rich Low_complexity Low_complexity 1 30 0 484 211 16 32 chr17 7818739 7818862 -77619618 + MIR SINE MIR 100 220 -42 820 247 60 40 chr17 7820477 7820737 -77617743 + MIR SINE MIR 2 261 -1 240 263 47 23 chr17 7821000 7821171 -77617309 + (CAGAGA)n Simple_repeat Simple_repeat 1 175 0 468 77 0 0 chr17 7826346 7826411 -77612069 + (CCA)n Simple_repeat Simple_repeat 2 66 0 219 69 0 0 chr17 7826901 7826930 -77611550 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1335 82 0 0 chr17 7827350 7827521 -77610959 + AluSq SINE Alu 136 306 -7 671 267 108 0 chr17 7827538 7827714 -77610766 - MER91A DNA MER1_type 0 196 2 187 360 58 12 chr17 7829349 7829435 -77609045 + MIR SINE MIR 21 110 -152 2194 97 3 7 chr17 7829697 7829996 -77608484 + AluSq SINE Alu 1 298 -15 234 241 0 60 chr17 7831606 7831689 -77606791 + G-rich Low_complexity Low_complexity 3 80 0 201 39 0 0 chr17 7832102 7832128 -77606352 + (CGGGG)n Simple_repeat Simple_repeat 3 28 0 2404 94 0 0 chr17 7834069 7834377 -77604103 + AluSp SINE Alu 1 308 -5 2324 105 0 0 chr17 7834473 7834779 -77603701 + AluSx SINE Alu 1 306 -6 415 232 71 0 chr17 7835104 7835216 -77603264 - L2 LINE L2 -1 3312 3193 2363 93 0 3 chr17 7835787 7836097 -77602383 - AluSg SINE Alu -1 309 1 2260 94 3 22 chr17 7837432 7837750 -77600730 - AluSx SINE Alu 0 312 1 1936 139 36 3 chr17 7837757 7838059 -77600421 - AluJb SINE Alu 0 312 1 1147 143 94 25 chr17 7837974 7838069 -77600411 - AluJo SINE Alu -92 220 133 2458 86 0 0 chr17 7838069 7838373 -77600107 - AluSx SINE Alu -8 304 1 1147 143 94 25 chr17 7838373 7838493 -77599987 - AluJo SINE Alu -179 133 3 2375 109 0 0 chr17 7839020 7839323 -77599157 + AluSq SINE Alu 1 303 -10 2434 76 0 19 chr17 7840632 7840949 -77597531 - AluY SINE Alu 0 311 1 2524 79 0 0 chr17 7841444 7841748 -77596732 + AluSx SINE Alu 1 304 -8 762 292 29 0 chr17 7842440 7842649 -77595831 + MIR SINE MIR 28 242 -20 740 183 0 7 chr17 7843523 7843676 -77594804 + CT-rich Low_complexity Low_complexity 1 152 0 2472 70 0 3 chr17 7843676 7843975 -77594505 - AluY SINE Alu -13 298 1 1817 90 9 0 chr17 7843975 7844207 -77594273 - AluSp SINE Alu -6 307 74 2197 132 0 3 chr17 7844396 7844699 -77593781 + AluSx SINE Alu 1 302 -10 2123 124 7 0 chr17 7845632 7845930 -77592550 + AluJb SINE Alu 1 300 -12 317 231 74 9 chr17 7846121 7846229 -77592251 - L2 LINE L2 0 3313 3199 1846 77 0 0 chr17 7846346 7846567 -77591913 + AluSg/x SINE Alu 87 307 -5 391 103 0 0 chr17 7847241 7847299 -77591181 - Alu SINE Alu 0 301 244 2272 82 41 0 chr17 7847640 7847933 -77590547 + AluSg SINE Alu 1 305 -5 350 249 259 16 chr17 7848112 7848208 -77590272 + L1ME LINE L1 4373 4444 -1702 858 245 58 37 chr17 7848208 7848502 -77589978 + AluJo SINE Alu 1 300 -2 350 249 259 16 chr17 7848502 7848722 -77589758 + L1ME LINE L1 4444 4766 -1380 1376 189 66 4 chr17 7848738 7848997 -77589483 + AluJb SINE Alu 6 280 -32 216 0 0 0 chr17 7848998 7849022 -77589458 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1037 244 88 31 chr17 7849029 7849206 -77589274 + L1ME LINE L1 4773 4939 -1207 2291 123 0 0 chr17 7849206 7849516 -77588964 + AluSx SINE Alu 1 310 -2 1037 244 88 31 chr17 7849516 7849818 -77588662 + L1ME LINE L1 4939 5279 -867 231 267 19 29 chr17 7849808 7849913 -77588567 + L1ME LINE L1 5818 5921 -249 * 2469 79 3 3 chr17 7850112 7850416 -77588064 + AluSx SINE Alu 1 304 -8 1617 104 0 58 chr17 7850623 7850864 -77587616 + AluSx SINE Alu 1 227 -85 482 160 0 0 chr17 7850939 7851014 -77587466 - AluS SINE Alu -237 76 2 243 235 20 0 chr17 7851050 7851101 -77587379 - MLT1B LTR MaLR -295 95 44 668 198 28 55 chr17 7851881 7852063 -77586417 + MIR SINE MIR 86 262 0 269 118 20 0 chr17 7853570 7853621 -77584859 + CT-rich Low_complexity Low_complexity 1 52 0 2302 111 3 0 chr17 7853641 7853939 -77584541 - AluSq SINE Alu -14 299 1 815 240 102 79 chr17 7854163 7854634 -77583846 - L2 LINE L2 0 3313 2832 2010 107 0 18 chr17 7854681 7854961 -77583519 + AluJb SINE Alu 1 275 -37 736 240 158 58 chr17 7854973 7855335 -77583145 - L2 LINE L2 -1961 1353 956 2181 118 3 0 chr17 7855907 7856194 -77582286 - AluSq SINE Alu -25 288 1 276 263 50 12 chr17 7856233 7856313 -77582167 - L2 LINE L2 -15 3257 3175 753 158 0 0 chr17 7856844 7856971 -77581509 + FLAM_C SINE Alu 2 128 -5 399 198 31 0 chr17 7857143 7857239 -77581241 + MER5A DNA MER1_type 4 102 -87 278 278 93 0 chr17 7857312 7857420 -77581060 - L2 LINE L2 -1021 2293 2176 501 231 134 43 chr17 7860395 7860581 -77577899 + MIR SINE MIR 3 205 -57 869 135 8 15 chr17 7860852 7860985 -77577495 + AluJb SINE Alu 1 132 -180 497 308 0 15 chr17 7861181 7861451 -77577029 + (TG)n Simple_repeat Simple_repeat 1 265 0 629 97 11 0 chr17 7861838 7861931 -77576549 + AluSg1 SINE Alu 2 95 -214 347 324 15 93 chr17 7861970 7862082 -77576398 - HAL1 LINE L1 -13 2494 2404 1974 104 90 0 chr17 7862082 7862360 -77576120 - AluSp SINE Alu -10 303 1 347 324 15 93 chr17 7862360 7862451 -77576029 - HAL1 LINE L1 -103 2404 2307 469 300 104 58 chr17 7862478 7862708 -77575772 - L1MC5 LINE L1 -32 8010 7660 184 264 264 0 chr17 7862936 7863027 -77575453 + L2 LINE L2 3156 3270 -2 2387 97 0 0 chr17 7863027 7863326 -77575154 - AluSx SINE Alu -13 299 1 531 261 31 0 chr17 7863399 7863560 -77574920 - L1MC4a LINE L1 -1959 5849 5684 705 118 26 92 chr17 7863562 7863714 -77574766 + FLAM_C SINE Alu 2 143 0 1970 107 0 92 chr17 7863987 7864313 -77574167 - AluSq SINE Alu -17 296 1 938 191 0 0 chr17 7864313 7864465 -77574015 - FRAM SINE Alu -9 167 16 2455 88 3 7 chr17 7864884 7865192 -77573288 - AluSx SINE Alu -5 307 1 214 171 0 0 chr17 7865636 7865671 -77572809 + (CA)n Simple_repeat Simple_repeat 1 35 0 2262 124 0 3 chr17 7866315 7866622 -77571858 - AluSx SINE Alu -6 306 1 346 196 196 0 chr17 7868118 7868215 -77570265 + MIR SINE MIR 17 132 -130 422 293 32 16 chr17 7868256 7868379 -77570101 - L2 LINE L2 -6 3307 3183 312 192 88 16 chr17 7868624 7868672 -77569808 - L1MEd LINE L1 -3175 2954 2911 2435 68 0 29 chr17 7868672 7868980 -77569500 + AluSx SINE Alu 1 299 -13 312 192 88 16 chr17 7868980 7869056 -77569424 - L1MEd LINE L1 -3218 2911 2821 788 280 21 7 chr17 7869080 7869362 -77569118 - L1M4 LINE L1 -3531 2615 2330 931 222 54 102 chr17 7869468 7869511 -77568969 - L1MEd LINE L1 -3435 2694 2650 782 222 0 18 chr17 7869511 7869678 -77568802 - FRAM SINE Alu -2 164 1 931 222 54 102 chr17 7869678 7870153 -77568327 - L1MEd LINE L1 -3479 2650 2201 269 175 0 38 chr17 7870168 7870248 -77568232 - HAL1 LINE L1 -413 2094 2018 1470 186 91 11 chr17 7870249 7870534 -77567946 - AluJb SINE Alu -4 308 1 243 0 0 0 chr17 7870547 7870574 -77567906 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 736 263 91 51 chr17 7870583 7870698 -77567782 - HAL1 LINE L1 -481 2026 1917 2457 67 3 0 chr17 7870698 7871007 -77567473 + AluSp SINE Alu 1 310 0 736 263 91 51 chr17 7871007 7871221 -77567259 - HAL1 LINE L1 -590 1917 1683 901 183 35 6 chr17 7871221 7871390 -77567090 - AluJo SINE Alu -138 174 1 1417 279 79 47 chr17 7871396 7872171 -77566309 - L1MEd LINE L1 -5318 801 2 252 320 23 64 chr17 7872253 7872425 -77566055 - L2 LINE L2 -2299 1015 851 376 267 69 0 chr17 7872436 7872537 -77565943 - MIR SINE MIR -68 140 33 2114 142 0 10 chr17 7872572 7872882 -77565598 - AluJb SINE Alu -5 307 1 1992 103 0 0 chr17 7875206 7875459 -77563021 + AluSx SINE Alu 1 253 -59 198 0 0 0 chr17 7875461 7875483 -77562997 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 708 104 0 0 chr17 7876916 7877022 -77561458 - AluJo SINE Alu -1 311 206 1028 96 39 45 chr17 7877022 7877178 -77561302 - AluJo SINE Alu -157 155 1 2273 128 0 0 chr17 7877584 7877890 -77560590 - AluSx SINE Alu -6 306 1 2517 83 3 6 chr17 7878355 7878669 -77559811 - AluSp SINE Alu 0 313 1 3894 137 51 48 chr17 7879574 7880043 -77558437 + MER44D DNA MER2_type 1 346 -2141 2436 104 0 0 chr17 7880043 7880350 -77558130 + AluSx SINE Alu 1 307 -5 3894 137 51 48 chr17 7880350 7880611 -77557869 + MER44D DNA MER2_type 346 605 0 2152 112 3 3 chr17 7880999 7881320 -77557160 + AluSp SINE Alu 1 321 0 22 0 0 0 chr17 7881753 7881775 -77556705 + AT_rich Low_complexity Low_complexity 1 22 0 2028 138 7 0 chr17 7882057 7882347 -77556133 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr17 7882347 7882369 -77556111 + AT_rich Low_complexity Low_complexity 1 22 0 201 175 0 0 chr17 7883882 7883922 -77554558 + (CAG)n Simple_repeat Simple_repeat 1 40 0 306 50 0 0 chr17 7884482 7884522 -77553958 + (CCA)n Simple_repeat Simple_repeat 2 41 0 226 253 0 36 chr17 7884540 7884623 -77553857 + C-rich Low_complexity Low_complexity 2 81 0 21 0 0 0 chr17 7889327 7889348 -77549132 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 7889605 7889640 -77548840 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr17 7890349 7890380 -77548100 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 7890705 7890726 -77547754 + AT_rich Low_complexity Low_complexity 1 21 0 381 362 65 25 chr17 7896056 7896090 -77542390 - MIR SINE MIR -35 227 196 1528 137 23 46 chr17 7896090 7896353 -77542127 - AluJo SINE Alu -18 294 38 381 362 65 25 chr17 7896353 7896517 -77541963 - MIR SINE MIR -66 196 21 478 310 221 28 chr17 7897561 7898219 -77540261 + L2 LINE L2 2472 3267 -5 2330 101 0 13 chr17 7898398 7898714 -77539766 + AluSq SINE Alu 1 312 -1 1322 167 107 4 chr17 7900307 7900540 -77537940 - AluJo SINE Alu -55 257 1 437 148 206 77 chr17 7900540 7900565 -77537915 - Tigger4(Zombi) DNA MER2_type -186 2545 2525 2092 121 31 0 chr17 7900565 7900855 -77537625 + AluSx SINE Alu 1 299 -13 437 148 206 77 chr17 7900855 7900984 -77537496 - Tigger4(Zombi) DNA MER2_type -206 2525 1 438 248 38 15 chr17 7901128 7901261 -77537219 - MIR SINE MIR -62 200 65 374 197 0 0 chr17 7901341 7901402 -77537078 - MLT1G1 LTR MaLR -70 525 465 588 204 157 9 chr17 7901420 7901695 -77536785 - MLT1G1 LTR MaLR -194 348 3 365 237 119 17 chr17 7901840 7901958 -77536522 - L2 LINE L2 0 3272 3143 2506 43 0 68 chr17 7902027 7902350 -77536130 - AluY SINE Alu -10 301 1 2256 89 31 0 chr17 7902720 7903012 -77535468 - AluSg SINE Alu -7 303 3 304 320 107 0 chr17 7903196 7903318 -77535162 - L2 LINE L2 -7 3306 3172 603 334 218 22 chr17 7903603 7904955 -77533525 - L2 LINE L2 -1230 2084 469 2497 85 3 3 chr17 7904957 7905264 -77533216 + AluSq SINE Alu 1 307 -6 1860 160 3 3 chr17 7905267 7905574 -77532906 + AluJo SINE Alu 1 307 0 1761 165 10 13 chr17 7905679 7905982 -77532498 - AluJo SINE Alu -1 311 10 3020 135 56 4 chr17 7906008 7906564 -77531916 - L1MB7 LINE L1 -19 6165 5581 325 219 143 19 chr17 7907201 7907306 -77531174 - L1MC4a LINE L1 -1818 5990 5873 365 273 74 69 chr17 7907596 7907812 -77530668 - L1MC4a LINE L1 -1780 6028 5812 328 106 0 0 chr17 7907828 7907875 -77530605 - MER4E LTR ERV1 -69 710 664 498 313 30 20 chr17 7907900 7908101 -77530379 - L1MC4a LINE L1 -2032 5776 5574 329 344 46 7 chr17 7908228 7908379 -77530101 + MIR3 SINE MIR 16 172 -36 540 178 20 27 chr17 7908511 7908657 -77529823 - MER113 DNA MER1_type? -365 156 12 2016 93 0 15 chr17 7908819 7909088 -77529392 + AluSq SINE Alu 26 290 -23 24 53 0 0 chr17 7909089 7909127 -77529353 + AT_rich Low_complexity Low_complexity 1 38 0 351 178 48 27 chr17 7909270 7909416 -77529064 + (TA)n Simple_repeat Simple_repeat 2 150 0 32 0 0 0 chr17 7910035 7910067 -77528413 + AT_rich Low_complexity Low_complexity 1 32 0 253 186 29 29 chr17 7910355 7910425 -77528055 + GA-rich Low_complexity Low_complexity 2 71 0 245 307 18 18 chr17 7910555 7910747 -77527733 + GA-rich Low_complexity Low_complexity 1 192 0 348 309 24 18 chr17 7912178 7912343 -77526137 + (CAGG)n Simple_repeat Simple_repeat 2 167 0 244 306 8 32 chr17 7912319 7912443 -77526037 + GA-rich Low_complexity Low_complexity 6 126 0 * 234 0 0 0 chr17 7914426 7914452 -77524028 + (CA)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 7914803 7914850 -77523630 + (TA)n Simple_repeat Simple_repeat 1 47 0 360 0 0 0 chr17 7915052 7915092 -77523388 + (GGA)n Simple_repeat Simple_repeat 2 41 0 582 79 0 0 chr17 7915093 7915169 -77523311 + AluSg/x SINE Alu 153 228 -82 227 189 0 0 chr17 7915270 7915323 -77523157 + GA-rich Low_complexity Low_complexity 1 53 0 396 71 0 0 chr17 7915394 7915450 -77523030 + (CCG)n Simple_repeat Simple_repeat 2 57 0 240 35 0 0 chr17 7915676 7915705 -77522775 + (CCG)n Simple_repeat Simple_repeat 2 30 0 1976 99 21 14 chr17 8121321 8121603 -77316877 + AluSx SINE Alu 18 301 -11 2114 134 13 0 chr17 8121603 8121908 -77316572 + AluSx SINE Alu 1 309 -3 188 293 0 40 chr17 8121935 8122010 -77316470 - L2 LINE L2 0 3313 3242 634 124 10 0 chr17 8122013 8122110 -77316370 + MER4A LTR ERV1 1 98 -566 308 47 23 0 chr17 8122106 8122149 -77316331 + MER4A LTR ERV1 257 300 -364 * 2190 84 0 3 chr17 8122155 8122441 -77316039 + AluSc SINE Alu 5 289 -20 1958 152 0 3 chr17 8123240 8123549 -77314931 - AluSx SINE Alu -4 308 1 762 181 0 8 chr17 8123747 8123874 -77314606 + FLAM_C SINE Alu 1 126 -17 189 181 14 42 chr17 8124256 8124328 -77314152 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2055 134 0 0 chr17 8124438 8124737 -77313743 + AluSx SINE Alu 3 301 -11 421 224 51 0 chr17 8124820 8124918 -77313562 + MIR SINE MIR 28 130 -132 2367 85 0 0 chr17 8125160 8125467 -77313013 - AluSq SINE Alu -6 307 1 299 268 41 0 chr17 8125718 8125815 -77312665 - MLT1K LTR MaLR 0 588 488 2107 131 0 0 chr17 8125815 8126120 -77312360 + AluSx SINE Alu 1 305 -7 884 195 0 6 chr17 8126120 8126313 -77312167 + AluSg/x SINE Alu 134 312 0 269 245 137 50 chr17 8126313 8126452 -77312028 - MLT1K LTR MaLR -111 477 327 260 134 0 149 chr17 8126588 8126608 -77311872 + MER58 DNA MER1_type 2364 2385 -35 1944 98 12 67 chr17 8126608 8126935 -77311545 - AluSg SINE Alu -1 309 1 260 134 0 149 chr17 8126935 8126981 -77311499 + MER58 DNA MER1_type 2385 2420 0 277 200 50 40 chr17 8127225 8127325 -77311155 - HAL1 LINE L1 -347 2160 2060 369 175 9 85 chr17 8127401 8127497 -77310983 + AluJ/FLAM SINE Alu 1 75 -227 976 102 88 0 chr17 8127505 8127652 -77310828 + FRAM SINE Alu 1 40 0 235 284 31 16 chr17 8127846 8127973 -77310507 - L1ME3A LINE L1 -213 5957 5829 2224 91 0 7 chr17 8128016 8128323 -77310157 + AluSg SINE Alu 1 305 -5 2271 56 56 0 chr17 8128475 8128760 -77309720 + AluY SINE Alu 1 301 -10 453 318 95 0 chr17 8129260 8129439 -77309041 - MIR SINE MIR -4 258 63 1977 128 7 16 chr17 8129439 8129744 -77308736 + AluSq SINE Alu 1 302 -11 201 39 0 0 chr17 8129854 8129880 -77308600 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 206 213 0 43 chr17 8129953 8130000 -77308480 + A-rich Low_complexity Low_complexity 5 49 0 990 192 63 7 chr17 8130216 8130449 -77308031 - MSTB1 LTR MaLR 0 432 175 633 251 80 54 chr17 8130589 8130939 -77307541 + LTR45 LTR ERV1 266 525 0 869 134 78 66 chr17 8130939 8131144 -77307336 - MSTB1 LTR MaLR -229 203 3 318 211 0 0 chr17 8131394 8131451 -77307029 - AluS SINE Alu -238 62 6 254 159 16 32 chr17 8131454 8131517 -77306963 + MLT1J LTR MaLR 441 502 -9 2259 102 0 0 chr17 8131803 8132098 -77306382 - AluSx SINE Alu -17 295 1 1184 150 40 0 chr17 8132684 8132849 -77305631 - AluSg/x SINE Alu -20 292 116 195 69 0 0 chr17 8132849 8132878 -77305602 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 1184 150 40 0 chr17 8132878 8132912 -77305568 - AluSg/x SINE Alu -196 116 85 962 98 15 0 chr17 8132927 8133059 -77305421 - AluSg SINE Alu -176 134 1 507 257 47 34 chr17 8133063 8133211 -77305269 + L2 LINE L2 3164 3313 0 2161 98 0 3 chr17 8133432 8133727 -77304753 - AluSc SINE Alu -15 294 1 839 287 126 59 chr17 8134530 8135144 -77303336 - L2 LINE L2 -77 3195 2473 2129 103 0 0 chr17 8135144 8135425 -77303055 + AluSg SINE Alu 1 281 -29 839 287 126 59 chr17 8135425 8135705 -77302775 - L2 LINE L2 -799 2473 2213 1826 100 38 72 chr17 8136014 8136334 -77302146 + AluSp SINE Alu 1 309 -4 1235 195 167 39 chr17 8136471 8136802 -77301678 + LTR47A LTR ERVL 2 392 -60 2032 102 24 10 chr17 8136802 8137097 -77301383 - AluSx SINE Alu -4 308 10 1235 195 167 39 chr17 8137097 8137154 -77301326 + LTR47A LTR ERVL 392 440 -12 2150 89 31 0 chr17 8137778 8138069 -77300411 - AluSg SINE Alu 0 310 11 744 253 23 73 chr17 8138251 8138512 -77299968 - MER21B LTR ERV1 -151 712 465 984 112 0 0 chr17 8138522 8138656 -77299824 + AluSq/x SINE Alu 3 136 -177 2440 74 3 0 chr17 8138656 8138968 -77299512 + AluSp SINE Alu 1 313 0 460 72 58 0 chr17 8138989 8139058 -77299422 + Alu SINE Alu 230 302 -8 2274 92 0 3 chr17 8139058 8139363 -77299117 + AluY SINE Alu 1 304 -7 1655 148 30 11 chr17 8139365 8139636 -77298844 - AluJo SINE Alu -36 276 1 351 294 188 60 chr17 8139722 8140042 -77298438 - L2 LINE L2 -41 3231 2857 2221 83 3 3 chr17 8140042 8140343 -77298137 + AluSx SINE Alu 1 301 -11 351 294 188 60 chr17 8140343 8140390 -77298090 - L2 LINE L2 -415 2857 2817 317 78 0 0 chr17 8140769 8140820 -77297660 - AluSp/q SINE Alu 0 303 253 902 123 27 0 chr17 8140826 8140972 -77297508 - AluJb SINE Alu -26 286 137 1725 159 17 7 chr17 8140972 8141273 -77297207 - AluJb SINE Alu -8 304 1 828 244 53 8 chr17 8141274 8141536 -77296944 + Charlie4a DNA MER1_type 78 351 -157 1713 176 0 23 chr17 8141538 8141845 -77296635 - AluSx SINE Alu -12 300 1 814 187 33 0 chr17 8141848 8141998 -77296482 + AluJb SINE Alu 156 310 -2 321 266 0 0 chr17 8141998 8142077 -77296403 + Charlie4a DNA MER1_type 430 508 0 1020 83 0 0 chr17 8143256 8143389 -77295091 - AluSq/x SINE Alu -179 133 1 191 88 29 0 chr17 8143398 8143432 -77295048 - MIR SINE MIR -65 143 109 1707 156 6 41 chr17 8143684 8143998 -77294482 + AluJo SINE Alu 1 303 -9 2153 104 7 10 chr17 8144327 8144634 -77293846 + AluSp SINE Alu 1 306 -7 200 314 20 0 chr17 8144649 8144700 -77293780 - L2 LINE L2 -30 3242 3191 1429 132 29 50 chr17 8145147 8145428 -77293052 + AluJb SINE Alu 1 275 -37 252 0 0 0 chr17 8145430 8145458 -77293022 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2188 87 0 20 chr17 8148763 8148895 -77289585 + AluSx SINE Alu 4 137 -175 2152 93 0 0 chr17 8148895 8149200 -77289280 + AluSg SINE Alu 2 306 0 2188 87 0 20 chr17 8149200 8149366 -77289114 + AluSx SINE Alu 137 297 -15 328 257 0 0 chr17 8150143 8150213 -77288267 + MIR SINE MIR 61 130 -78 448 282 92 48 chr17 8150366 8150531 -77287949 - MIR SINE MIR 0 262 83 2442 52 3 0 chr17 8150531 8150841 -77287639 - AluY SINE Alu 0 311 1 448 282 92 48 chr17 8150841 8150902 -77287578 - MIR SINE MIR -179 83 26 2348 70 0 0 chr17 8150904 8151203 -77287277 - AluY SINE Alu -12 299 1 2360 60 23 0 chr17 8152903 8153204 -77285276 - AluY SINE Alu -3 308 1 1272 200 148 38 chr17 8153204 8153726 -77284754 - L1MC3 LINE L1 -892 7103 6640 2155 114 0 0 chr17 8153726 8154025 -77284455 + AluSx SINE Alu 1 299 -13 1272 200 148 38 chr17 8154025 8154299 -77284181 - L1MC3 LINE L1 -1355 6640 6149 25 0 0 0 chr17 8154317 8154342 -77284138 + AT_rich Low_complexity Low_complexity 1 25 0 2021 101 3 14 chr17 8154349 8154637 -77283843 + AluSp SINE Alu 3 287 -26 396 55 0 0 chr17 8154641 8154696 -77283784 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 921 100 0 50 chr17 8154698 8154838 -77283642 + AluSc SINE Alu 1 133 -176 2347 71 3 0 chr17 8154838 8155135 -77283345 + AluY SINE Alu 1 298 -13 2207 94 3 10 chr17 8155139 8155474 -77283006 + AluSx SINE Alu 1 312 0 672 142 0 0 chr17 8155486 8155613 -77282867 - L1M4 LINE L1 -1070 5076 4950 397 149 11 11 chr17 8155633 8155720 -77282760 + CT-rich Low_complexity Low_complexity 1 87 0 456 218 28 7 chr17 8155720 8155862 -77282618 - L1M4 LINE L1 -1251 4895 4751 847 213 197 8 chr17 8156368 8156607 -77281873 - MLT1K LTR MaLR -11 577 294 1940 171 47 75 chr17 8156607 8157058 -77281422 - LTR8 LTR ERV1 0 691 254 2207 105 0 3 chr17 8157060 8157364 -77281116 - AluSg SINE Alu -7 303 1 1698 183 146 84 chr17 8157364 8157422 -77281058 - LTR8 LTR ERV1 -109 582 529 2296 46 0 0 chr17 8157422 8157732 -77280748 - AluY SINE Alu 0 310 1 1698 183 146 84 chr17 8157732 8158220 -77280260 - LTR8 LTR ERV1 -162 529 1 207 0 0 0 chr17 8158234 8158257 -77280223 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1958 89 33 0 chr17 8158714 8159008 -77279472 + AluSg SINE Alu 1 303 0 2283 102 0 0 chr17 8159501 8159804 -77278676 - AluSq SINE Alu -10 303 1 1270 167 83 62 chr17 8159812 8159968 -77278512 - AluJo SINE Alu -16 296 130 2217 97 0 3 chr17 8159968 8160267 -77278213 - AluSq SINE Alu -15 298 1 1270 167 83 62 chr17 8160267 8160398 -77278082 - AluJo SINE Alu -182 130 3 414 0 0 0 chr17 8160498 8160544 -77277936 + (CA)n Simple_repeat Simple_repeat 2 47 0 553 286 12 12 chr17 8164044 8164131 -77274349 + MIR SINE MIR 13 102 -160 2169 101 0 3 chr17 8164131 8164429 -77274051 + AluSq SINE Alu 1 297 -16 553 286 12 12 chr17 8164429 8164509 -77273971 + MIR SINE MIR 101 180 -82 807 157 0 50 chr17 8165002 8165142 -77273338 + FLAM_C SINE Alu 1 133 0 420 195 0 0 chr17 8166775 8166857 -77271623 + MIR SINE MIR 43 124 -84 495 219 42 8 chr17 8166910 8167029 -77271451 + MER106A DNA MER1_type 1 123 -113 1999 110 21 0 chr17 8167264 8167546 -77270934 - AluSx SINE Alu -24 288 1 1345 166 24 20 chr17 8167614 8167861 -77270619 - AluJo SINE Alu -62 250 3 511 284 193 9 chr17 8167980 8168198 -77270282 - MIR SINE MIR -3 259 2 21 0 0 0 chr17 8168217 8168238 -77270242 + AT_rich Low_complexity Low_complexity 1 21 0 2234 80 13 7 chr17 8168248 8168547 -77269933 + AluSx SINE Alu 1 301 -11 711 244 11 22 chr17 8168550 8168730 -77269750 - MIR SINE MIR -14 248 71 2024 122 10 0 chr17 8170268 8170564 -77267916 - AluSx SINE Alu 0 312 14 927 102 0 36 chr17 8170587 8170724 -77267756 - FLAM_C SINE Alu -1 132 1 1276 238 84 27 chr17 8170731 8171298 -77267182 - L2 LINE L2 0 3313 2725 204 279 0 0 chr17 8172219 8172262 -77266218 + (TG)n Simple_repeat Simple_repeat 2 44 0 186 103 0 0 chr17 8173337 8173366 -77265114 + (TGG)n Simple_repeat Simple_repeat 2 30 0 2229 131 3 0 chr17 8173466 8173771 -77264709 + AluJb SINE Alu 1 306 -6 565 207 29 81 chr17 8173817 8173991 -77264489 - L2 LINE L2 -1 3312 3148 1101 96 0 0 chr17 8173993 8174129 -77264351 + AluSq/x SINE Alu 1 136 -177 2304 85 0 36 chr17 8174129 8174434 -77264046 + AluSx SINE Alu 1 294 -18 2550 70 3 0 chr17 8174438 8174740 -77263740 + AluSp SINE Alu 1 303 -10 282 306 38 50 chr17 8174832 8174992 -77263488 - L2 LINE L2 -236 3077 2920 1788 149 28 84 chr17 8176113 8176157 -77262323 - LTR56 LTR ERV1 0 445 400 2284 112 0 6 chr17 8176157 8176469 -77262011 + AluSx SINE Alu 1 310 -2 1788 149 28 84 chr17 8176469 8176827 -77261653 - LTR56 LTR ERV1 -45 400 70 1813 118 0 0 chr17 8176827 8177073 -77261407 - AluJo SINE Alu -13 299 54 1788 149 28 84 chr17 8177073 8177133 -77261347 - LTR56 LTR ERV1 -375 70 8 21 36 0 0 chr17 8177738 8177766 -77260714 + GC_rich Low_complexity Low_complexity 1 28 0 2079 124 10 3 chr17 8178393 8178692 -77259788 - AluSg SINE Alu -9 301 1 303 269 34 139 chr17 8178714 8179038 -77259442 + MLT1K LTR MaLR 188 477 -111 946 195 0 6 chr17 8179038 8179231 -77259249 - AluSg/x SINE Alu 0 310 132 2283 125 0 0 chr17 8179231 8179534 -77258946 - AluSx SINE Alu -7 305 3 189 181 14 42 chr17 8179644 8179716 -77258764 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 2176 89 3 51 chr17 8179987 8180179 -77258301 - AluSx SINE Alu -14 298 125 2604 66 0 0 chr17 8180179 8180484 -77257996 - AluY SINE Alu -6 305 1 2176 89 3 51 chr17 8180484 8180604 -77257876 - AluSx SINE Alu -187 125 1 2546 60 7 0 chr17 8180804 8181104 -77257376 + AluSp SINE Alu 2 303 -10 1241 276 40 13 chr17 8181249 8181647 -77256833 + MLT1I LTR MaLR 1 409 0 571 279 63 123 chr17 8181820 8182308 -77256172 - LTR67 LTR ERVL 0 557 99 2126 149 7 0 chr17 8182352 8182660 -77255820 - AluSx SINE Alu -2 310 1 286 206 21 103 chr17 8182971 8183045 -77255435 + MIR SINE MIR 75 142 -120 2527 39 0 0 chr17 8183045 8183369 -77255111 + AluY SINE Alu 1 324 0 286 206 21 103 chr17 8183369 8183390 -77255090 + MIR SINE MIR 142 163 -99 991 228 14 0 chr17 8183390 8183605 -77254875 - LTR16C LTR ERVL 0 491 274 2271 100 10 0 chr17 8184018 8184308 -77254172 - AluSx SINE Alu -18 294 2 1575 141 0 28 chr17 8184309 8184558 -77253922 + AluJo SINE Alu 67 308 -4 784 179 0 8 chr17 8185540 8185674 -77252806 + FLAM_A SINE Alu 1 133 0 2290 107 0 3 chr17 8185678 8185976 -77252504 + AluSp SINE Alu 1 297 -16 1058 146 5 47 chr17 8186250 8186442 -77252038 - AluJo SINE Alu -2 310 127 616 232 32 13 chr17 8186727 8186836 -77251644 - MIR SINE MIR -73 189 75 367 167 26 0 chr17 8186836 8186914 -77251566 + MER116 DNA Mariner 1 80 0 616 232 32 13 chr17 8186914 8186959 -77251521 - MIR SINE MIR -187 75 32 2263 95 9 25 chr17 8187007 8187322 -77251158 - AluSq SINE Alu -3 310 1 22 0 0 0 chr17 8187333 8187355 -77251125 + AT_rich Low_complexity Low_complexity 1 22 0 1669 161 13 33 chr17 8187500 8187804 -77250676 - AluJo SINE Alu -14 298 1 538 298 114 35 chr17 8187814 8187906 -77250574 - L1ME LINE L1 -297 5824 5741 2132 144 0 3 chr17 8187906 8188204 -77250276 - AluSx SINE Alu -15 297 1 538 298 114 35 chr17 8188204 8188453 -77250027 - L1ME LINE L1 -380 5741 5456 1034 91 0 8 chr17 8188453 8188585 -77249895 - AluSc SINE Alu -178 131 1 306 0 0 0 chr17 8188587 8188621 -77249859 + (TG)n Simple_repeat Simple_repeat 2 35 0 1699 116 5 0 chr17 8188635 8188859 -77249621 - AluSx SINE Alu -86 226 2 716 186 0 0 chr17 8188871 8188995 -77249485 - FLAM_C SINE Alu -9 124 1 323 245 72 10 chr17 8188999 8189146 -77249334 - L1M3 LINE L1 -741 5430 5287 375 315 0 93 chr17 8189180 8189260 -77249220 - L1ME LINE L1 -659 5462 5403 2200 101 37 3 chr17 8189260 8189557 -77248923 - AluSg SINE Alu -2 308 2 375 315 0 93 chr17 8189557 8189638 -77248842 - L1ME LINE L1 -718 5403 5316 184 206 59 59 chr17 8190631 8190699 -77247781 + L2 LINE L2 186 253 -3061 4596 140 19 29 chr17 8191565 8192445 -77246035 - pTR5 LTR ERV1 -604 1600 31 1918 109 0 0 chr17 8192498 8192746 -77245734 + AluSx SINE Alu 1 248 -64 2083 84 14 28 chr17 8192821 8193138 -77245342 - AluSp SINE Alu 0 313 1 365 117 67 0 chr17 8193483 8193543 -77244937 - Charlie8 DNA MER1_type -1 2416 2353 628 177 8 16 chr17 8193588 8193712 -77244768 - MLT1F LTR MaLR 0 542 420 26 0 0 0 chr17 8193716 8193742 -77244738 + AT_rich Low_complexity Low_complexity 1 26 0 2410 145 25 20 chr17 8193746 8193979 -77244501 - L1MA8 LINE L1 -20 6271 6041 2361 52 55 3 chr17 8193979 8194269 -77244211 - AluY SINE Alu -5 306 2 2284 110 0 3 chr17 8194270 8194569 -77243911 - AluSq SINE Alu -14 299 2 2410 145 25 20 chr17 8194569 8194780 -77243700 - L1MA8 LINE L1 -249 6042 5823 2215 145 0 0 chr17 8194780 8195090 -77243390 - AluSq SINE Alu -3 310 1 1627 131 41 28 chr17 8195454 8195744 -77242736 + AluSp SINE Alu 1 294 -19 431 239 80 75 chr17 8195860 8196061 -77242419 + LTR67 LTR ERVL 348 549 -8 254 216 40 14 chr17 8196070 8196144 -77242336 - Charlie8 DNA MER1_type -2254 163 88 1579 154 0 82 chr17 8196154 8196337 -77242143 - AluJo SINE Alu -10 292 96 2174 111 0 54 chr17 8196337 8196484 -77241996 + AluSx SINE Alu 1 154 -158 2361 68 4 0 chr17 8196484 8196764 -77241716 + AluSp SINE Alu 1 281 -32 273 29 0 0 chr17 8196765 8196799 -77241681 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 2174 111 0 54 chr17 8196799 8196965 -77241515 + AluSx SINE Alu 153 299 -13 1579 154 0 82 chr17 8196965 8197099 -77241381 - AluJo SINE Alu -206 96 1 1075 201 4 39 chr17 8197119 8197353 -77241127 - MLT1A1 LTR MaLR 0 365 140 1039 67 0 0 chr17 8197359 8197479 -77241001 + AluSq/x SINE Alu 1 120 -192 388 80 0 0 chr17 8197483 8197533 -77240947 - AluSp SINE Alu -43 260 211 1342 137 89 117 chr17 8197533 8197994 -77240486 - LTR7 LTR ERV1 -2 448 1 1800 74 5 0 chr17 8197994 8198209 -77240271 - AluSp SINE Alu -97 216 1 463 193 42 17 chr17 8198244 8198363 -77240117 + MLT2F LTR ERVL 12 133 -530 627 250 39 34 chr17 8198381 8198492 -77239988 + MLT1I LTR MaLR 201 315 -94 1349 224 15 64 chr17 8198492 8198885 -77239595 + MLT1A2 LTR MaLR 1 374 0 627 250 39 34 chr17 8198885 8198981 -77239499 + MLT1I LTR MaLR 315 409 0 1831 174 0 0 chr17 8199201 8199505 -77238975 + AluJb SINE Alu 9 312 0 331 170 0 0 chr17 8199680 8199733 -77238747 + Tigger7 DNA MER2_type 26 78 -2409 2377 102 3 0 chr17 8199737 8200040 -77238440 + AluSx SINE Alu 1 304 -8 438 177 0 0 chr17 8200279 8200358 -77238122 + FLAM_A SINE Alu 29 107 -35 4001 150 37 47 chr17 8200369 8200767 -77237713 + L1MC2 LINE L1 5186 5587 -757 1826 135 59 17 chr17 8200767 8201056 -77237424 - AluSg SINE Alu -9 301 1 4001 150 37 47 chr17 8201056 8201089 -77237391 + L1MC2 LINE L1 5587 5619 -725 2432 71 0 3 chr17 8201089 8201384 -77237096 - AluY SINE Alu -17 294 1 4001 150 37 47 chr17 8201384 8201881 -77236599 + L1MC2 LINE L1 5619 6106 -238 995 193 6 0 chr17 8201881 8202047 -77236433 + FRAM SINE Alu 1 162 -14 317 125 0 0 chr17 8202051 8202099 -77236381 + L1MC2 LINE L1 6103 6150 -194 983 85 0 0 chr17 8202099 8202228 -77236252 + AluSp/q SINE Alu 181 309 -4 2241 112 23 0 chr17 8202287 8202590 -77235890 - AluSx SINE Alu -2 310 1 2831 173 73 38 chr17 8203054 8203157 -77235323 - L1MC4 LINE L1 0 8322 8224 2447 72 7 0 chr17 8203157 8203449 -77235031 - AluSg SINE Alu -14 296 3 2831 173 73 38 chr17 8203449 8203504 -77234976 - L1MC4 LINE L1 -98 8224 8172 297 0 0 0 chr17 8203504 8203537 -77234943 + (CA)n Simple_repeat Simple_repeat 1 33 0 2831 173 73 38 chr17 8203537 8204059 -77234421 - L1MC4 LINE L1 -150 8172 7617 258 318 47 0 chr17 8204246 8204331 -77234149 + L2 LINE L2 3224 3312 -1 228 67 0 0 chr17 8205044 8205074 -77233406 + (TAA)n Simple_repeat Simple_repeat 2 31 0 234 330 23 23 chr17 8206068 8206156 -77232324 - MIR3 SINE MIR -22 186 99 1202 153 113 4 chr17 8206364 8206593 -77231887 - AluJo SINE Alu -58 254 1 2372 70 10 23 chr17 8206805 8207107 -77231373 + AluY SINE Alu 1 298 -13 2128 228 110 9 chr17 8207297 8207832 -77230648 - MLT1G1 LTR MaLR -5 590 2 2086 129 17 0 chr17 8208120 8208407 -77230073 - AluSx SINE Alu -20 292 1 402 192 14 68 chr17 8208535 8208630 -77229850 - L1MC4 LINE L1 -1339 6983 6884 2364 106 0 0 chr17 8208630 8208933 -77229547 - AluSx SINE Alu -9 303 1 402 192 14 68 chr17 8208933 8208960 -77229520 - L1MC4 LINE L1 -1438 6884 1974 331 267 82 22 chr17 8208972 8209107 -77229373 - L1M4 LINE L1 -1182 4964 4822 969 205 23 0 chr17 8209110 8209281 -77229199 - AluJb SINE Alu -1 311 137 659 275 24 29 chr17 8209376 8209517 -77228963 - Charlie8 DNA MER1_type -134 207 66 2347 113 0 0 chr17 8209517 8209819 -77228661 + AluSq SINE Alu 2 303 -10 659 275 24 29 chr17 8209819 8209884 -77228596 - Charlie8 DNA MER1_type -275 66 2 212 243 36 126 chr17 8210422 8210533 -77227947 - MIR SINE MIR -41 221 121 2235 84 6 22 chr17 8210611 8210922 -77227558 + AluSg SINE Alu 1 306 -4 292 301 58 19 chr17 8210965 8211068 -77227412 - L2 LINE L2 -2 3270 3164 2092 119 10 3 chr17 8211491 8211784 -77226696 - AluSx SINE Alu -17 295 1 2115 112 7 0 chr17 8212168 8212446 -77226034 - AluSg SINE Alu -30 280 1 2285 91 0 10 chr17 8212643 8212940 -77225540 + AluSc SINE Alu 1 294 -15 1200 117 0 6 chr17 8212940 8213103 -77225377 + AluSc SINE Alu 132 293 -16 1642 12 0 0 chr17 8213103 8213273 -77225207 - SVA Other Other -99 1287 1118 901 20 0 0 chr17 8213273 8213374 -77225106 + SVA Other Other 1284 1384 -2 696 152 80 16 chr17 8213405 8213530 -77224950 + FLAM_C SINE Alu 1 133 0 416 225 80 14 chr17 8213536 8213674 -77224806 + MLT1C LTR MaLR 27 173 -332 1080 217 34 49 chr17 8213837 8214061 -77224419 + MLT1C LTR MaLR 205 426 -41 2203 124 7 0 chr17 8214061 8214359 -77224121 - AluSx SINE Alu -12 300 1 1080 217 34 49 chr17 8214359 8214401 -77224079 + MLT1C LTR MaLR 426 467 0 2218 106 7 3 chr17 8216306 8216599 -77221881 + AluSx SINE Alu 1 294 -18 623 84 0 75 chr17 8217793 8217900 -77220580 - AluJb SINE Alu -179 133 35 * 666 180 0 9 chr17 8217899 8218010 -77220470 - AluSq/x SINE Alu -202 111 2 856 153 0 0 chr17 8218203 8218334 -77220146 + FLAM_C SINE Alu 3 133 0 10105 59 9 85 chr17 8218554 8220053 -77218427 + SVA Other Other 1 1386 0 2192 94 34 0 chr17 8220072 8220369 -77218111 + AluY SINE Alu 1 307 -4 474 292 20 64 chr17 8220381 8220420 -77218060 + MER102b DNA MER1_type 97 136 -1292 2394 81 0 0 chr17 8220420 8220715 -77217765 - AluY SINE Alu -16 295 1 474 292 20 64 chr17 8220715 8220925 -77217555 + MER102b DNA MER1_type 136 335 -6 1083 128 75 102 chr17 8220929 8221155 -77217325 - AluJb SINE Alu -6 306 87 397 284 123 25 chr17 8221670 8221832 -77216648 + MIR SINE MIR 46 223 -39 184 299 0 52 chr17 8221857 8221934 -77216546 + L2 LINE L2 2993 3065 -207 2081 133 0 16 chr17 8223452 8223761 -77214719 + AluSx SINE Alu 1 304 -8 839 126 8 8 chr17 8223781 8223908 -77214572 + AluSp/q SINE Alu 170 296 -17 277 262 177 26 chr17 8224104 8224368 -77214112 - L2 LINE L2 -56 3257 2920 478 230 119 0 chr17 8224387 8224513 -77213967 - MER5A DNA MER1_type -2 187 47 633 100 20 10 chr17 8224578 8224678 -77213802 - AluSp/q SINE Alu -1 312 212 1969 122 21 10 chr17 8224692 8224980 -77213500 + AluSx SINE Alu 1 291 -21 3271 145 46 55 chr17 8226094 8226791 -77211689 + LTR8 LTR ERV1 1 691 0 325 165 126 4 chr17 8226883 8227044 -77211436 + AluJo SINE Alu 70 282 -20 2355 73 0 10 chr17 8227044 8227346 -77211134 + AluSq SINE Alu 1 299 -14 2337 66 36 10 chr17 8229430 8229447 -77209033 - AluSq SINE Alu 0 313 298 558 0 0 0 chr17 8229447 8229509 -77208971 + (TG)n Simple_repeat Simple_repeat 2 63 0 2337 66 36 10 chr17 8229509 8229796 -77208684 - AluSq SINE Alu -15 298 1 608 265 64 23 chr17 8229904 8230123 -77208357 - MIR SINE MIR 0 262 35 785 171 16 0 chr17 8230284 8230413 -77208067 + FLAM_C SINE Alu 2 132 -11 2320 63 0 11 chr17 8230450 8230774 -77207706 + AluY SINE Alu 5 311 0 508 259 131 40 chr17 8230780 8231132 -77207348 + L1ME4a LINE L1 5613 5996 -125 22 0 0 0 chr17 8231444 8231466 -77207014 + AT_rich Low_complexity Low_complexity 1 22 0 747 158 6 11 chr17 8231483 8231660 -77206820 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 407 210 3 27 chr17 8231685 8231983 -77206497 + (TAGA)n Simple_repeat Simple_repeat 1 290 0 679 214 19 44 chr17 8231984 8232143 -77206337 - MIR SINE MIR -10 252 98 292 262 0 0 chr17 8232124 8232185 -77206295 - MIR SINE MIR -67 141 81 * 602 100 0 0 chr17 8232581 8232661 -77205819 + AluSc SINE Alu 202 281 -28 402 57 0 0 chr17 8233458 8233511 -77204969 + (CA)n Simple_repeat Simple_repeat 2 54 0 405 264 40 35 chr17 8233725 8233899 -77204581 + L3 LINE CR1 997 1171 -406 194 233 75 120 chr17 8234008 8234141 -77204339 + MER5A DNA MER1_type 3 129 -60 * 250 267 111 11 chr17 8234059 8234149 -77204331 - MER5A DNA MER1_type -27 162 64 2128 91 45 3 chr17 8234365 8234651 -77203829 + AluSx SINE Alu 1 298 -14 295 71 18 18 chr17 8234759 8234815 -77203665 + (CAAAAA)n Simple_repeat Simple_repeat 4 59 0 1256 171 24 0 chr17 8234829 8235075 -77203405 + L1M3 LINE L1 5483 5734 -449 335 295 124 47 chr17 8236464 8236593 -77201887 - MER91A DNA MER1_type -36 160 22 1822 104 0 50 chr17 8236861 8237121 -77201359 - AluSx SINE Alu -65 247 1 2192 107 0 26 chr17 8237401 8237709 -77200771 - AluSx SINE Alu -11 301 2 1535 146 31 8 chr17 8237748 8238002 -77200478 + AluSx SINE Alu 1 260 -52 1570 72 5 5 chr17 8238097 8238292 -77200188 + AluY SINE Alu 1 195 -116 460 171 0 0 chr17 8238619 8238695 -77199785 + MIR3 SINE MIR 87 162 -46 2241 157 122 9 chr17 8238936 8239387 -77199093 - MLT1D LTR MaLR 0 505 4 576 239 70 35 chr17 8240435 8240518 -77197962 - L1ME LINE L1 -331 5790 5711 2352 96 0 3 chr17 8240518 8240819 -77197661 + AluSp SINE Alu 1 300 -13 576 239 70 35 chr17 8240819 8240965 -77197515 - L1ME LINE L1 -410 5711 5553 2047 68 0 0 chr17 8240978 8241214 -77197266 + AluSg SINE Alu 61 296 -14 483 96 0 14 chr17 8241941 8242014 -77196466 - MER5A DNA MER1_type -83 106 35 247 175 41 124 chr17 8241943 8242040 -77196440 + MER5A DNA MER1_type 96 184 -5 * 815 243 17 6 chr17 8242176 8242353 -77196127 + MIR SINE MIR 76 254 -8 1999 120 14 0 chr17 8242454 8242730 -77195750 + AluSg1 SINE Alu 1 280 -29 212 257 168 26 chr17 8243148 8243261 -77195219 - L2 LINE L2 -10 3262 3134 776 63 9 0 chr17 8243999 8244110 -77194370 + (TAGA)n Simple_repeat Simple_repeat 2 113 0 261 0 0 0 chr17 8244175 8244204 -77194276 + (CA)n Simple_repeat Simple_repeat 2 30 0 2369 100 0 0 chr17 8244466 8244756 -77193724 + AluSg SINE Alu 3 292 -18 475 304 49 104 chr17 8244891 8245256 -77193224 + L2 LINE L2 2928 3272 0 2589 42 0 10 chr17 8245489 8245795 -77192685 + AluY SINE Alu 1 303 -8 1103 106 0 0 chr17 8245800 8245941 -77192539 + AluSq/x SINE Alu 1 141 -172 652 208 107 0 chr17 8246109 8246258 -77192222 - MIR SINE MIR -42 220 56 294 225 181 75 chr17 8246256 8246416 -77192064 - MIR3 SINE MIR -11 197 21 * 403 232 165 52 chr17 8246808 8247153 -77191327 + L1ME4a LINE L1 5738 6121 0 695 235 9 0 chr17 8247224 8247241 -77191239 + GA-rich Low_complexity Low_complexity 1 16 -529 1730 201 7 3 chr17 8247241 8247549 -77190931 + AluJb SINE Alu 1 309 -3 695 235 9 0 chr17 8247549 8247765 -77190715 + GA-rich Low_complexity Low_complexity 16 545 0 473 314 12 40 chr17 8247823 8248075 -77190405 + L1ME4a LINE L1 5309 5553 -2255 1377 260 72 100 chr17 8248095 8249023 -77189457 + HAL1 LINE L1 16 906 -1601 1437 148 186 11 chr17 8249023 8249286 -77189194 + AluSg1 SINE Alu 1 309 0 1377 260 72 100 chr17 8249286 8249537 -77188943 + HAL1 LINE L1 905 1162 -1345 1491 245 90 20 chr17 8249656 8250255 -77188225 + HAL1 LINE L1 1126 1766 -741 * 1613 115 0 8 chr17 8250247 8250500 -77187980 + L1MB3 LINE L1 5892 6142 -41 2173 96 0 4 chr17 8250500 8250780 -77187700 + AluSg SINE Alu 1 279 -31 1771 127 50 4 chr17 8250834 8251119 -77187361 + AluJb SINE Alu 11 307 0 1204 190 5 5 chr17 8251167 8251372 -77187108 + AluJb SINE Alu 100 304 -8 231 125 0 0 chr17 8251372 8251412 -77187068 + (GA)n Simple_repeat Simple_repeat 1 40 0 354 211 141 122 chr17 8251428 8251732 -77186748 + HAL1 LINE L1 1721 2030 -477 665 191 8 0 chr17 8251732 8251858 -77186622 + FLAM_A SINE Alu 5 131 -2 2525 58 0 0 chr17 8251869 8252161 -77186319 - AluY SINE Alu -19 292 1 935 266 64 10 chr17 8252162 8252553 -77185927 + L1ME4a LINE L1 5552 5963 -158 364 198 29 77 chr17 8253779 8253818 -77184662 + MIR SINE MIR 57 96 -139 2390 89 0 0 chr17 8253818 8254111 -77184369 + AluSx SINE Alu 3 295 -17 364 198 29 77 chr17 8254111 8254187 -77184293 + MIR SINE MIR 96 167 -68 597 92 92 0 chr17 8254287 8254374 -77184106 - AluJ/FLAM SINE Alu -216 96 2 1252 264 81 49 chr17 8254382 8254434 -77184046 - L1MC4a LINE L1 -1826 5982 5933 2486 88 0 0 chr17 8254434 8254739 -77183741 - AluSx SINE Alu -7 305 1 1252 264 81 49 chr17 8254739 8255293 -77183187 - L1MC4a LINE L1 -1875 5933 5357 2454 73 3 3 chr17 8255317 8255619 -77182861 - AluSg SINE Alu 0 310 9 2398 72 14 0 chr17 8256027 8256317 -77182163 - AluSg SINE Alu -16 294 1 203 56 83 0 chr17 8258111 8258147 -77180333 + (GCCTG)n Simple_repeat Simple_repeat 5 43 0 275 320 0 24 chr17 8258564 8258689 -77179791 + CT-rich Low_complexity Low_complexity 2 123 0 690 321 81 29 chr17 8259104 8259477 -77179003 - MARNA DNA Mariner -14 572 167 2200 110 0 13 chr17 8259477 8259778 -77178702 - AluSx SINE Alu -9 303 7 690 321 81 29 chr17 8259778 8259884 -77178596 - MARNA DNA Mariner -419 167 68 777 243 63 29 chr17 8260329 8260535 -77177945 + MIR SINE MIR 50 262 0 180 77 0 0 chr17 8260941 8260967 -77177513 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 393 257 119 9 chr17 8260974 8261083 -77177397 - L2 LINE L2 -6 3307 3187 345 336 36 7 chr17 8261200 8261340 -77177140 - MIR3 SINE MIR -16 192 49 224 227 0 67 chr17 8261748 8261823 -77176657 + CT-rich Low_complexity Low_complexity 4 73 0 25 0 0 0 chr17 8262055 8262080 -77176400 + AT_rich Low_complexity Low_complexity 1 25 0 404 261 162 0 chr17 8262080 8262222 -77176258 - MIR SINE MIR -1 261 97 216 111 0 0 chr17 8262606 8262642 -77175838 + (TC)n Simple_repeat Simple_repeat 1 36 0 330 292 104 10 chr17 8263403 8263605 -77174875 + L1ME4a LINE L1 5844 6064 -57 2059 138 7 14 chr17 8263650 8263947 -77174533 + AluSx SINE Alu 3 297 -15 2074 138 3 3 chr17 8264210 8264508 -77173972 + AluJb SINE Alu 1 298 -14 184 255 85 0 chr17 8264520 8264567 -77173913 - L2 LINE L2 -1 3312 3262 1481 235 7 0 chr17 8264694 8265000 -77173480 - AluJo SINE Alu -4 308 1 338 263 183 0 chr17 8265024 8265161 -77173319 + L2 LINE L2 3151 3312 -1 2226 114 0 22 chr17 8266329 8266646 -77171834 + AluSx SINE Alu 1 310 -2 218 280 0 0 chr17 8266725 8266775 -77171705 - L2 LINE L2 -3 3310 3261 434 266 50 50 chr17 8266981 8267180 -77171300 + L2 LINE L2 3114 3312 -1 383 0 21 0 chr17 8267225 8267272 -77171208 + (TG)n Simple_repeat Simple_repeat 2 49 0 2336 110 0 0 chr17 8267273 8267573 -77170907 - AluSg SINE Alu -10 300 1 2250 97 14 0 chr17 8267593 8267883 -77170597 - AluY SINE Alu -17 294 1 26 64 0 0 chr17 8267883 8267930 -77170550 + AT_rich Low_complexity Low_complexity 1 47 0 415 302 93 80 chr17 8268181 8268621 -77169859 - L2 LINE L2 -1 3271 2826 461 236 34 61 chr17 8270294 8270442 -77168038 + MIR SINE MIR 103 246 -16 538 283 71 49 chr17 8270460 8270686 -77167794 + MIR SINE MIR 2 232 -30 7172 122 23 60 chr17 8270686 8270788 -77167692 - HSMAR2 DNA Mariner 0 1302 1198 1873 140 49 11 chr17 8270788 8271074 -77167406 - AluSx SINE Alu -15 297 1 7172 122 23 60 chr17 8271074 8271216 -77167264 - HSMAR2 DNA Mariner -104 1198 1052 398 75 15 0 chr17 8271216 8271283 -77167197 + (TA)n Simple_repeat Simple_repeat 2 69 0 7172 122 23 60 chr17 8271283 8271308 -77167172 - HSMAR2 DNA Mariner -250 1052 1028 2498 59 0 0 chr17 8271308 8271595 -77166885 - AluY SINE Alu -24 287 1 7172 122 23 60 chr17 8271595 8272593 -77165887 - HSMAR2 DNA Mariner -274 1028 81 850 172 0 8 chr17 8272593 8272727 -77165753 - FLAM_C SINE Alu 0 133 1 7172 122 23 60 chr17 8272727 8272782 -77165698 - HSMAR2 DNA Mariner -1221 81 26 2540 28 7 0 chr17 8273176 8273459 -77165021 + AluSq SINE Alu 1 312 0 244 0 0 0 chr17 8273459 8273486 -77164994 + (CAAA)n Simple_repeat Simple_repeat 2 88 0 372 307 154 36 chr17 8273669 8273975 -77164505 - L2 LINE L2 0 3313 2972 23 0 0 0 chr17 8274536 8274559 -77163921 + GC_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr17 8275609 8275642 -77162838 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 8275738 8275760 -77162720 + AT_rich Low_complexity Low_complexity 1 22 0 2202 82 7 0 chr17 8276351 8276643 -77161837 - AluSg SINE Alu -16 294 1 501 268 80 74 chr17 8276848 8276900 -77161580 - MARNA DNA Mariner -201 385 335 1713 176 3 3 chr17 8276900 8277202 -77161278 - AluJb SINE Alu -10 302 1 501 268 80 74 chr17 8277202 8277312 -77161168 - MARNA DNA Mariner -251 335 227 2294 73 3 16 chr17 8277312 8277626 -77160854 - AluY SINE Alu -1 310 1 2058 99 6 41 chr17 8277626 8277940 -77160540 - AluSq SINE Alu -10 303 1 501 268 80 74 chr17 8277940 8278111 -77160369 - MARNA DNA Mariner -358 228 48 848 188 90 106 chr17 8278166 8278421 -77160059 - MIR SINE MIR -10 252 2 2148 107 7 0 chr17 8278622 8278922 -77159558 + AluSg SINE Alu 1 302 -8 273 242 44 0 chr17 8280156 8280247 -77158233 - HAL1 LINE L1 -698 1809 1715 848 128 5 138 chr17 8280804 8280992 -77157488 - FRAM SINE Alu -13 163 1 2318 57 33 10 chr17 8281164 8281465 -77157015 - AluY SINE Alu -3 308 1 206 214 107 71 chr17 8281536 8281620 -77156860 - L2 LINE L2 -5 3308 3222 239 328 121 35 chr17 8281727 8281925 -77156555 - L2 LINE L2 -215 3057 2843 1316 173 191 8 chr17 8283443 8283830 -77154650 - Charlie4a DNA MER1_type -3 505 48 2094 128 0 0 chr17 8285531 8285829 -77152651 - AluSx SINE Alu -14 298 1 535 70 14 0 chr17 8286389 8286460 -77152020 - MER51A LTR ERV1 -284 350 279 * 811 129 0 0 chr17 8286456 8286582 -77151898 - MER51A LTR ERV1 -501 133 18 1434 140 53 4 chr17 8287097 8287325 -77151155 - MER8 DNA MER2_type 0 239 1 2172 97 0 0 chr17 8287379 8287667 -77150813 - AluSg SINE Alu -22 288 1 608 228 16 0 chr17 8287692 8287815 -77150665 - FLAM_C SINE Alu -18 125 1 2691 164 50 2 chr17 8287815 8288296 -77150184 - L1MB2 LINE L1 -43 6128 5625 2280 82 0 20 chr17 8288387 8288690 -77149790 + AluSx SINE Alu 1 297 -15 403 262 162 26 chr17 8289602 8289831 -77148649 - L1ME4a LINE L1 -4 6117 5858 608 147 86 0 chr17 8290271 8290387 -77148093 - MER3 DNA MER1_type 0 209 84 346 19 75 0 chr17 8291056 8291109 -77147371 + CT-rich Low_complexity Low_complexity 2 58 0 2119 126 10 0 chr17 8291116 8291425 -77147055 - AluSq SINE Alu -1 312 1 507 293 61 12 chr17 8291569 8291733 -77146747 - L2 LINE L2 -24 3289 3118 367 224 370 5 chr17 8291744 8291936 -77146544 - MIR SINE MIR 0 262 1 386 293 77 28 chr17 8292013 8292300 -77146180 + L1ME LINE L1 4513 4813 -1333 254 308 94 6 chr17 8292361 8292520 -77145960 + L1ME LINE L1 4901 5073 -1073 367 331 70 6 chr17 8292589 8292746 -77145734 + L1ME LINE L1 5232 5398 -748 586 279 149 30 chr17 8292754 8293055 -77145425 + L1ME LINE L1 5456 5792 -329 2372 62 3 7 chr17 8293792 8294098 -77144382 + AluSq SINE Alu 1 305 -8 239 248 106 26 chr17 8294679 8294792 -77143688 - HAL1 LINE L1 -99 2408 2287 25 51 0 0 chr17 8294795 8294834 -77143646 + AT_rich Low_complexity Low_complexity 1 39 0 2287 101 0 0 chr17 8294880 8295186 -77143294 - AluSx SINE Alu -6 306 1 334 344 78 7 chr17 8295659 8295813 -77142667 - HAL1 LINE L1 -698 1809 1645 210 244 61 17 chr17 8296226 8296341 -77142139 + (TATATG)n Simple_repeat Simple_repeat 5 124 0 349 337 203 11 chr17 8296370 8296848 -77141632 + L2 LINE L2 1772 2341 -973 189 0 0 0 chr17 8296936 8296957 -77141523 + (TG)n Simple_repeat Simple_repeat 2 22 0 1880 148 0 16 chr17 8297108 8297419 -77141061 - AluSx SINE Alu -6 306 1 322 283 28 78 chr17 8299208 8299388 -77139092 - L1ME4a LINE L1 -189 5932 5762 770 109 78 16 chr17 8299802 8299930 -77138550 - AluJo SINE Alu -176 136 1 202 211 0 0 chr17 8301191 8301229 -77137251 + (TG)n Simple_repeat Simple_repeat 2 39 0 308 196 62 52 chr17 8304642 8304739 -77133741 + L1MC4 LINE L1 6608 6705 -1337 527 239 22 50 chr17 8304856 8305036 -77133444 - L1ME4a LINE L1 -206 5915 5741 1941 91 0 0 chr17 8307146 8307398 -77131082 + AluSg SINE Alu 36 287 -23 21 0 0 0 chr17 8308020 8308041 -77130439 + AT_rich Low_complexity Low_complexity 1 21 0 339 89 0 0 chr17 8308048 8308093 -77130387 - HY4 scRNA scRNA -3 90 46 1943 93 30 43 chr17 8308093 8308395 -77130085 - AluSx SINE Alu -14 298 1 344 129 106 129 chr17 8309447 8309532 -77128948 - HsTC2 DNA Tc2 -349 1549 1291 1255 104 6 0 chr17 8309532 8309715 -77128765 - AluSp SINE Alu -7 306 123 271 149 21 0 chr17 8309715 8309762 -77128718 - HsTC2 DNA Tc2 -595 1303 1256 235 176 98 0 chr17 8309763 8309814 -77128666 - HsTC2 DNA Tc2 -1763 135 80 1744 118 7 36 chr17 8310759 8311064 -77127416 + AluSx SINE Alu 1 296 -16 2054 114 3 10 chr17 8311575 8311873 -77126607 - AluSx SINE Alu -16 296 1 491 259 175 0 chr17 8314645 8314788 -77123692 - MER58C DNA MER1_type -29 186 19 467 284 8 8 chr17 8316367 8316494 -77121986 - L2 LINE L2 -7 3306 3180 2081 98 0 3 chr17 8317123 8317419 -77121061 - AluSx SINE Alu -17 295 1 625 257 163 33 chr17 8318969 8319331 -77119149 + L2 LINE L2 2405 2813 -501 397 278 103 8 chr17 8320514 8320640 -77117840 - MIR3 SINE MIR -64 144 7 693 271 50 13 chr17 8321410 8321709 -77116771 + L1MB8 LINE L1 2788 3097 -3049 513 263 80 6 chr17 8321754 8321929 -77116551 - L1MEd LINE L1 -5900 219 32 407 218 228 0 chr17 8322714 8322815 -77115665 - FLAM_C SINE Alu -9 124 1 313 188 43 29 chr17 8322840 8322909 -77115571 - L1ME4a LINE L1 0 6121 6052 3257 195 57 62 chr17 8322915 8323852 -77114628 + L1MB8 LINE L1 3689 4620 -1526 239 164 104 0 chr17 8323892 8323959 -77114521 + L1MB8 LINE L1 5229 5302 -844 3831 173 35 20 chr17 8323965 8324744 -77113736 + L1MB8 LINE L1 5389 6178 0 463 214 92 0 chr17 8324816 8324914 -77113566 + AluJb SINE Alu 199 305 -7 315 0 0 0 chr17 8324931 8324966 -77113514 + (A)n Simple_repeat Simple_repeat 1 35 0 242 159 45 102 chr17 8325187 8325275 -77113205 - L1ME LINE L1 -372 5749 5667 1504 229 28 30 chr17 8325641 8326068 -77112412 + L1MB8 LINE L1 5753 6178 0 331 247 93 41 chr17 8326141 8326238 -77112242 + FRAM SINE Alu 64 165 -1 318 303 81 66 chr17 8326260 8326458 -77112022 - L1ME4a LINE L1 -49 6072 5872 285 150 46 100 chr17 8326502 8326599 -77111881 - L1ME4a LINE L1 -372 5749 5667 1627 173 198 29 chr17 8328600 8329080 -77109400 + MLT1F1 LTR MaLR 5 565 -2 2126 108 0 0 chr17 8329132 8329419 -77109061 + AluSx SINE Alu 1 287 -25 342 0 0 0 chr17 8329419 8329457 -77109023 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr17 8329879 8329902 -77108578 + AT_rich Low_complexity Low_complexity 1 23 0 292 330 51 0 chr17 8331274 8331429 -77107051 - MIR SINE MIR -65 143 16 200 233 0 0 chr17 8332329 8332372 -77106108 + T-rich Low_complexity Low_complexity 1 43 0 1860 126 56 0 chr17 8332788 8333073 -77105407 + AluSx SINE Alu 1 301 -11 229 250 62 0 chr17 8334266 8334330 -77104150 + L2 LINE L2 3204 3271 -1 2103 89 7 3 chr17 8335426 8335719 -77102761 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 8335793 8335815 -77102665 + AT_rich Low_complexity Low_complexity 1 22 0 221 331 29 29 chr17 8336085 8336224 -77102256 + MIR SINE MIR 6 144 -118 2945 192 22 0 chr17 8336424 8336961 -77101519 + MER68 LTR ERV1 14 562 0 505 199 50 71 chr17 8337096 8337168 -77101312 - MER2 DNA MER2_type 0 345 276 2463 74 0 0 chr17 8337168 8337478 -77101002 + AluY SINE Alu 1 310 -1 505 199 50 71 chr17 8337478 8337546 -77100934 - MER2 DNA MER2_type -69 276 208 549 270 29 64 chr17 8337691 8337866 -77100614 - L1ME LINE L1 -397 5724 5555 2194 98 0 3 chr17 8337866 8338173 -77100307 + AluY SINE Alu 1 306 -5 549 270 29 64 chr17 8338173 8338201 -77100279 - L1ME LINE L1 -566 5555 5528 245 304 0 0 chr17 8338854 8338910 -77099570 + L2 LINE L2 3258 3313 0 810 289 44 8 chr17 8339206 8339455 -77099025 + MIR SINE MIR 4 261 -1 861 191 51 0 chr17 8340458 8340615 -77097865 + AluJb SINE Alu 144 308 -4 225 0 0 0 chr17 8341781 8341806 -77096674 + (TG)n Simple_repeat Simple_repeat 2 26 0 280 210 16 0 chr17 8341842 8341904 -77096576 - L3b LINE CR1 -350 1233 1171 2367 73 3 3 chr17 8342301 8342614 -77095866 + AluSp SINE Alu 1 313 0 227 250 42 108 chr17 8344361 8344481 -77093999 - MIR SINE MIR -97 111 12 2082 116 7 0 chr17 8344999 8345300 -77093180 + AluSx SINE Alu 1 303 -9 2202 107 3 3 chr17 8346990 8347300 -77091180 + AluSq SINE Alu 1 310 -3 591 200 25 0 chr17 8347347 8347467 -77091013 - AluJo/FRAM SINE Alu -14 298 176 1393 161 17 0 chr17 8347467 8347703 -77090777 - AluJo SINE Alu -72 240 1 269 284 71 43 chr17 8348079 8348113 -77090367 + L2 LINE L2 3125 3157 -115 3099 169 30 40 chr17 8348113 8348721 -77089759 + MER7C DNA MER2_type 1 602 0 269 284 71 43 chr17 8348721 8348827 -77089653 + L2 LINE L2 3157 3269 -3 21 0 0 0 chr17 8349051 8349072 -77089408 + AT_rich Low_complexity Low_complexity 1 21 0 311 288 121 44 chr17 8349312 8349341 -77089139 + L1ME4a LINE L1 5409 5434 -736 1887 78 0 16 chr17 8349341 8349599 -77088881 - AluY SINE Alu -14 297 44 311 288 121 44 chr17 8349599 8349818 -77088662 + L1ME4a LINE L1 5434 5683 -487 352 285 139 7 chr17 8349828 8349972 -77088508 + L1ME4a LINE L1 5710 5872 -249 609 150 0 9 chr17 8350243 8350316 -77088164 + L1MA2 LINE L1 6193 6266 -38 444 82 0 0 chr17 8350316 8350377 -77088103 + (TA)n Simple_repeat Simple_repeat 2 62 0 609 150 0 9 chr17 8350377 8350416 -77088064 + L1MA2 LINE L1 6266 6304 0 399 115 16 0 chr17 8350425 8350486 -77087994 + U7 snRNA snRNA 1 62 -1 2337 87 3 0 chr17 8350538 8350850 -77087630 + AluSq SINE Alu 1 313 0 782 228 14 27 chr17 8350993 8351212 -77087268 - L1MC5 LINE L1 -49 7912 7697 206 341 112 28 chr17 8354263 8354442 -77084038 + L2 LINE L2 3078 3271 -1 2280 93 0 3 chr17 8354835 8355145 -77083335 - AluSx SINE Alu -3 309 1 2388 56 0 10 chr17 8356158 8356461 -77082019 + AluY SINE Alu 1 300 -11 229 337 27 53 chr17 8356841 8357028 -77081452 + L2 LINE L2 2508 2689 -625 364 332 131 9 chr17 8357088 8357317 -77081163 + L2 LINE L2 2829 3085 -228 225 0 0 0 chr17 8357325 8357350 -77081130 + (TG)n Simple_repeat Simple_repeat 1 25 0 396 0 0 0 chr17 8357404 8357448 -77081032 + (TG)n Simple_repeat Simple_repeat 2 45 0 1753 154 0 3 chr17 8357448 8357733 -77080747 - AluJb SINE Alu -28 284 1 406 261 0 0 chr17 8358721 8358809 -77079671 + L1ME3 LINE L1 6075 6162 0 347 256 122 12 chr17 8359348 8359512 -77078968 + L1ME4a LINE L1 5936 6117 -4 2011 87 11 3 chr17 8359537 8359824 -77078656 + AluY SINE Alu 21 309 -2 230 299 112 10 chr17 8361559 8361701 -77076779 - MIR SINE MIR -36 226 59 200 322 58 11 chr17 8362562 8362649 -77075831 + L2 LINE L2 3223 3313 0 652 314 79 48 chr17 8362911 8363369 -77075111 - L2 LINE L2 -620 2694 2223 2249 103 0 28 chr17 8363458 8363779 -77074701 + AluSx SINE Alu 1 312 0 356 267 50 10 chr17 8364195 8364296 -77074184 + MIR SINE MIR 71 175 -87 1421 176 9 46 chr17 8364603 8364927 -77073553 + AluSx SINE Alu 1 312 0 363 250 77 10 chr17 8365341 8365445 -77073035 + MIR SINE MIR 71 181 -81 217 355 18 9 chr17 8365563 8365673 -77072807 + L2 LINE L2 2941 3051 -221 237 273 91 0 chr17 8365904 8365959 -77072521 + L2 LINE L2 3249 3308 -5 2193 107 0 0 chr17 8366236 8366536 -77071944 - AluSg SINE Alu -10 300 1 187 255 43 0 chr17 8367416 8367463 -77071017 + L2 LINE L2 3202 3250 -22 271 264 0 14 chr17 8369722 8369794 -77068686 - L2 LINE L2 -49 3223 3153 965 96 0 22 chr17 8372000 8372136 -77066344 - FLAM_C SINE Alu 0 133 1 239 281 0 0 chr17 8374005 8374062 -77064418 + MIR SINE MIR 206 262 0 2112 88 0 0 chr17 8376996 8377259 -77061221 + AluSg SINE Alu 33 295 -15 1107 183 18 9 chr17 8377263 8377487 -77060993 + L1MB7 LINE L1 5940 6165 -19 2269 105 0 13 chr17 8378640 8378955 -77059525 - AluSq SINE Alu -2 311 1 1730 197 53 26 chr17 8379280 8379697 -77058783 + MSTC LTR MaLR 1 428 0 1790 185 7 3 chr17 8380036 8380334 -77058146 - AluJo SINE Alu -13 299 1 2062 135 0 16 chr17 8380437 8380740 -77057740 - AluSx SINE Alu -14 298 1 204 231 41 99 chr17 8383185 8383306 -77055174 + L2 LINE L2 3137 3250 -22 226 283 17 0 chr17 8383752 8383812 -77054668 + L2 LINE L2 3168 3228 -44 2318 82 14 0 chr17 8383926 8384217 -77054263 - AluSg1 SINE Alu -14 295 1 484 255 31 46 chr17 8384463 8384659 -77053821 - L1MC4a LINE L1 -1926 5882 5690 458 346 42 4 chr17 8384689 8384929 -77053551 - L1MC4a LINE L1 -1610 4536 4288 356 285 242 29 chr17 8385411 8385853 -77052627 + L2 LINE L2 2781 3312 -1 2295 105 0 0 chr17 8386508 8386804 -77051676 - AluSx SINE Alu -16 296 1 1912 149 23 7 chr17 8387353 8387654 -77050826 - 7SLRNA srpRNA srpRNA -14 306 1 411 89 65 8 chr17 8388162 8388285 -77050195 + (TA)n Simple_repeat Simple_repeat 2 131 0 420 216 52 45 chr17 8388334 8388468 -77050012 + Charlie8 DNA MER1_type 87 221 -2196 210 37 0 0 chr17 8390141 8390168 -77048312 + (TCTCCC)n Simple_repeat Simple_repeat 3 29 0 6926 66 17 6 chr17 8390168 8391597 -77046883 + SVA Other Other 53 1380 -6 25 0 0 0 chr17 8391597 8391622 -77046858 + AT_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr17 8392242 8392273 -77046207 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr17 8392609 8392645 -77045835 + AT_rich Low_complexity Low_complexity 1 36 0 262 345 84 28 chr17 8392980 8393122 -77045358 - MIR SINE MIR -112 150 1 21 36 0 0 chr17 8394675 8394703 -77043777 + AT_rich Low_complexity Low_complexity 1 28 0 320 338 108 33 chr17 8394807 8395112 -77043368 + L1ME1 LINE L1 3364 3691 -2455 2194 104 0 10 chr17 8395114 8395413 -77043067 + AluSx SINE Alu 1 296 -16 971 73 0 0 chr17 8395456 8395579 -77042901 + AluSc SINE Alu 187 309 0 1846 223 40 29 chr17 8395712 8396263 -77042217 + L1ME1 LINE L1 4611 5167 -979 2489 234 50 18 chr17 8396372 8397095 -77041385 + L1ME1 LINE L1 5397 6142 -24 298 200 0 0 chr17 8397185 8397240 -77041240 + U6 snRNA snRNA 48 102 -5 194 79 0 26 chr17 8398820 8398858 -77039622 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 4523 182 74 19 chr17 8399012 8400149 -77038331 - Looper DNA T2_type -358 1200 1 237 196 0 0 chr17 8404222 8404273 -77034207 + A-rich Low_complexity Low_complexity 3 53 0 294 317 33 17 chr17 8404908 8405028 -77033452 + L2 LINE L2 3188 3309 -4 329 254 98 16 chr17 8405069 8405191 -77033289 - L2 LINE L2 -77 3236 3105 371 318 31 87 chr17 8405252 8405541 -77032939 - L2 LINE L2 -749 2565 2293 212 189 0 0 chr17 8405542 8405579 -77032901 + L2 LINE L2 3259 3295 -18 873 200 51 33 chr17 8406303 8406518 -77031962 - MER20 DNA MER1_type 0 219 1 1758 214 81 36 chr17 8406612 8407107 -77031373 + MLT1F LTR MaLR 26 542 0 1404 159 12 4 chr17 8407794 8408046 -77030434 + MLT1B LTR MaLR 1 254 -136 1150 247 47 14 chr17 8408178 8408538 -77029942 + MER87 LTR ERV1 168 539 -2 793 141 7 14 chr17 8408539 8408681 -77029799 + MLT1B LTR MaLR 250 390 0 295 211 0 0 chr17 8409260 8409312 -77029168 + AluJ/monomer SINE Alu 1 52 -250 2332 204 81 22 chr17 8409457 8410577 -77027903 + L1ME1 LINE L1 4330 5742 -424 1822 129 37 55 chr17 8410577 8410925 -77027555 + MER2 DNA MER2_type 3 344 0 2332 204 81 22 chr17 8410925 8411144 -77027336 + L1ME1 LINE L1 5742 5947 -219 2421 87 7 0 chr17 8411366 8411676 -77026804 - AluSp SINE Alu -1 312 1 2136 104 14 10 chr17 8412100 8412397 -77026083 - AluSx SINE Alu -14 298 1 216 214 0 0 chr17 8412576 8412632 -77025848 + GA-rich Low_complexity Low_complexity 4 59 0 322 229 43 0 chr17 8413059 8413129 -77025351 + HAL1 LINE L1 2030 2102 -405 343 116 0 29 chr17 8413237 8413306 -77025174 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 211 193 0 35 chr17 8413324 8413381 -77025099 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 2114 107 7 23 chr17 8413566 8413866 -77024614 - AluSg SINE Alu -15 295 1 1171 77 0 6 chr17 8413929 8414085 -77024395 - AluY SINE Alu -12 299 145 398 288 131 76 chr17 8414520 8414659 -77023821 - L1M4 LINE L1 -3060 3086 2956 2100 141 0 0 chr17 8414659 8414956 -77023524 - AluJb SINE Alu -15 297 1 398 288 131 76 chr17 8414956 8415435 -77023045 - L1M4 LINE L1 -3190 2956 2434 323 188 62 0 chr17 8415439 8415535 -77022945 + L2 LINE L2 1301 1402 -1912 484 342 131 47 chr17 8415874 8416937 -77021543 - L2 LINE L2 -1908 1406 255 378 60 0 0 chr17 8417676 8417726 -77020754 - L2 LINE L2 0 3313 3264 233 309 29 91 chr17 8417813 8417928 -77020552 + L3 LINE CR1 636 738 -839 2260 93 0 10 chr17 8417928 8418229 -77020251 - AluY SINE Alu -13 298 1 233 309 29 91 chr17 8418229 8418288 -77020192 + L3 LINE CR1 738 799 -778 1155 139 0 48 chr17 8418566 8418775 -77019705 + AluJo SINE Alu 98 296 -16 287 329 100 7 chr17 8418871 8419011 -77019469 - MIR SINE MIR -18 244 92 284 200 78 0 chr17 8419043 8419133 -77019347 + Charlie5 DNA MER1_type 2508 2604 -8 1972 48 0 0 chr17 8420712 8420940 -77017540 - AluY SINE Alu -6 305 78 1745 102 91 18 chr17 8421044 8421329 -77017151 + AluY SINE Alu 1 306 -5 291 28 0 0 chr17 8421772 8421808 -77016672 + (TG)n Simple_repeat Simple_repeat 1 36 0 234 0 0 0 chr17 8421807 8421833 -77016647 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 225 240 27 67 chr17 8421877 8421952 -77016528 + L2 LINE L2 3201 3272 0 1168 82 38 43 chr17 8421968 8422152 -77016328 - MER30B DNA MER1_type -4 186 4 3353 162 59 12 chr17 8423402 8424081 -77014399 + L1MB8 LINE L1 5451 6161 -17 888 210 25 0 chr17 8425515 8425677 -77012803 - FRAM SINE Alu 0 166 1 28 0 0 0 chr17 8425679 8425707 -77012773 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 8425958 8425979 -77012501 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 8426039 8426069 -77012411 + AT_rich Low_complexity Low_complexity 1 30 0 26 50 0 0 chr17 8426965 8427005 -77011475 + AT_rich Low_complexity Low_complexity 1 40 0 2082 148 0 0 chr17 8427070 8427367 -77011113 - AluSx SINE Alu -15 297 1 1857 141 4 4 chr17 8427767 8428036 -77010444 - AluSx SINE Alu 0 312 44 1607 176 31 7 chr17 8428540 8428829 -77009651 + AluJo SINE Alu 1 296 -16 299 269 59 17 chr17 8428961 8429080 -77009400 + MIR3 SINE MIR 71 194 -14 1168 125 0 0 chr17 8429513 8429673 -77008807 + AluSg/x SINE Alu 134 293 -19 347 325 81 61 chr17 8430256 8430755 -77007725 - L2 LINE L2 0 3272 2761 207 217 67 0 chr17 8431183 8431243 -77007237 + MIR SINE MIR 114 177 -85 470 257 193 23 chr17 8431366 8431584 -77006896 + MIR SINE MIR 1 255 -7 194 125 0 25 chr17 8431600 8431640 -77006840 + (ATG)n Simple_repeat Simple_repeat 1 39 0 243 138 36 6 chr17 8432954 8433010 -77005470 - LTR29 LTR ERV1 -66 556 513 1477 201 95 22 chr17 8433884 8434293 -77004187 - LTR56 LTR ERV1 0 445 7 2274 99 3 0 chr17 8434367 8434678 -77003802 - AluSp SINE Alu 0 312 1 215 170 21 0 chr17 8434702 8434749 -77003731 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 305 311 0 0 chr17 8434757 8434847 -77003633 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr17 8434847 8434870 -77003610 + (TA)n Simple_repeat Simple_repeat 1 23 0 319 96 164 45 chr17 8434880 8434977 -77003503 - LTR48B LTR ERV1 -38 749 499 317 225 110 38 chr17 8435236 8435402 -77003078 + L1ME2 LINE L1 5978 6154 -10 291 186 108 0 chr17 8435838 8435940 -77002540 + MER34 LTR ERV1 425 537 -5 329 275 75 0 chr17 8435973 8436093 -77002387 + L1MC4 LINE L1 7913 8041 -1 440 231 146 31 chr17 8436780 8436910 -77001570 + MLT1H LTR MaLR 405 549 0 961 324 109 31 chr17 8436968 8438263 -77000217 + L2 LINE L2 1328 2723 -591 361 314 35 30 chr17 8438948 8439117 -76999363 + MER5A DNA MER1_type 18 187 -2 402 236 14 56 chr17 8439430 8439574 -76998906 - MIR SINE MIR -108 154 17 2069 141 3 0 chr17 8439868 8440173 -76998307 - AluJb SINE Alu -6 306 1 2614 63 0 0 chr17 8440435 8440738 -76997742 - AluY SINE Alu -8 303 1 196 275 100 12 chr17 8440958 8441038 -76997442 + MIR SINE MIR 54 140 -68 3310 236 45 27 chr17 8441767 8442493 -76995987 + L1M4 LINE L1 3029 3782 -2364 459 0 0 0 chr17 8442493 8442544 -76995936 + (TA)n Simple_repeat Simple_repeat 1 51 0 3310 236 45 27 chr17 8442544 8442886 -76995594 + L1M4 LINE L1 3782 4116 -2030 1949 145 0 22 chr17 8443458 8443743 -76994737 + AluJo SINE Alu 1 280 -32 329 0 0 24 chr17 8443743 8443785 -76994695 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1949 145 0 22 chr17 8443785 8443817 -76994663 + AluJo SINE Alu 280 311 -1 274 257 18 55 chr17 8444205 8444314 -76994166 + L1ME4a LINE L1 5847 5951 -170 194 311 136 0 chr17 8444389 8444492 -76993988 + L2 LINE L2 3181 3297 -16 1107 175 28 0 chr17 8444947 8445158 -76993322 - MIR SINE MIR -23 239 23 207 69 0 0 chr17 8446507 8446536 -76991944 + (CACCC)n Simple_repeat Simple_repeat 3 31 0 408 254 129 40 chr17 8447692 8447893 -76990587 + MIR SINE MIR 38 256 -6 271 178 0 0 chr17 8447960 8448005 -76990475 - tRNA-Thr-ACT tRNA tRNA -32 45 1 601 258 107 24 chr17 8448011 8448302 -76990178 - L3 LINE CR1 -701 876 562 32 0 0 0 chr17 8449675 8449707 -76988773 + AT_rich Low_complexity Low_complexity 1 32 0 292 133 82 0 chr17 8449998 8450059 -76988421 - LTR41 LTR ERVL -2 793 712 185 289 13 40 chr17 8450165 8450241 -76988239 + MIR SINE MIR 109 182 -80 2073 165 36 65 chr17 8450290 8450433 -76988047 + Charlie1 DNA MER1_type 2207 2353 -408 2053 122 0 4 chr17 8450433 8450712 -76987768 + AluSg SINE Alu 1 278 -32 261 0 0 0 chr17 8450712 8450741 -76987739 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2073 165 36 65 chr17 8450741 8451116 -76987364 + Charlie1 DNA MER1_type 2351 2711 -50 185 357 12 0 chr17 8453683 8453767 -76984713 + L2 LINE L2 2898 2982 -290 2505 50 3 3 chr17 8453780 8454080 -76984400 - AluY SINE Alu -11 300 1 227 279 23 23 chr17 8454939 8455025 -76983455 + L1MC5 LINE L1 7132 7217 -744 189 0 0 0 chr17 8455241 8455262 -76983218 + (A)n Simple_repeat Simple_repeat 1 21 0 831 165 0 8 chr17 8455276 8455409 -76983071 + FLAM_C SINE Alu 1 132 -1 25 0 0 0 chr17 8456371 8456396 -76982084 + GC_rich Low_complexity Low_complexity 1 25 0 210 150 0 0 chr17 8456981 8457021 -76981459 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 24 0 0 0 chr17 8457229 8457253 -76981227 + AT_rich Low_complexity Low_complexity 1 24 0 309 151 0 0 chr17 8457894 8457947 -76980533 + (TA)n Simple_repeat Simple_repeat 1 53 0 2268 103 0 10 chr17 8457947 8458258 -76980222 - AluSc SINE Alu -1 308 1 348 98 34 28 chr17 8459082 8459191 -76979289 + L1MB8 LINE L1 5330 5440 -714 2300 105 0 0 chr17 8459195 8459491 -76978989 + AluSx SINE Alu 3 298 -14 185 0 40 0 chr17 8459521 8459546 -76978934 + (CAA)n Simple_repeat Simple_repeat 2 27 0 916 223 0 0 chr17 8459548 8459723 -76978757 + L1MB8 LINE L1 5433 5607 -577 883 116 31 0 chr17 8459766 8459895 -76978585 + AluSq/x SINE Alu 1 133 -179 315 211 157 64 chr17 8459921 8460125 -76978355 + L1MB8 LINE L1 5945 6167 -11 1955 93 12 0 chr17 8460158 8460406 -76978074 + AluSq SINE Alu 48 298 -15 1905 220 66 35 chr17 8460407 8460758 -76977722 + L1MB8 LINE L1 5599 5975 -203 2392 99 0 6 chr17 8460758 8461070 -76977410 + AluSg SINE Alu 1 310 0 1905 220 66 35 chr17 8461070 8461281 -76977199 + L1MB8 LINE L1 5975 6178 0 385 288 144 7 chr17 8461294 8461447 -76977033 + Charlie8 DNA MER1_type 104 277 -2140 2213 124 0 6 chr17 8461454 8461768 -76976712 - AluSx SINE Alu 0 312 1 1744 136 10 14 chr17 8462319 8462613 -76975867 + L1PB2 LINE L1 5858 6150 -1 2131 106 3 7 chr17 8462615 8462907 -76975573 + AluSx SINE Alu 1 291 -21 22 0 0 0 chr17 8462907 8462929 -76975551 + AT_rich Low_complexity Low_complexity 1 22 0 293 311 44 7 chr17 8462993 8463128 -76975352 - L2 LINE L2 -13 3300 3161 2363 80 3 0 chr17 8463442 8463729 -76974751 + AluSc SINE Alu 1 288 -21 441 0 0 0 chr17 8463729 8463778 -76974702 + (TA)n Simple_repeat Simple_repeat 1 49 0 380 313 38 84 chr17 8463791 8464241 -76974239 - L2 LINE L2 -343 2971 2543 1486 168 27 40 chr17 8464512 8464840 -76973640 - MER33 DNA MER1_type 0 324 1 313 242 15 0 chr17 8464876 8464942 -76973538 + L2 LINE L2 3201 3267 -5 785 163 6 0 chr17 8464951 8465129 -76973351 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 456 213 11 6 chr17 8465171 8465345 -76973135 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 482 209 7 85 chr17 8466257 8466340 -76972140 + MIR SINE MIR 81 149 -113 1554 167 3 60 chr17 8466340 8466729 -76971751 + AluJo SINE Alu 1 372 0 482 209 7 85 chr17 8466729 8466797 -76971683 + MIR SINE MIR 149 221 -41 2418 116 31 0 chr17 8467317 8467670 -76970810 + THE1B LTR MaLR 1 364 0 566 254 21 0 chr17 8467706 8467848 -76970632 + MIR SINE MIR 63 207 -55 1885 172 6 13 chr17 8467889 8468203 -76970277 - AluJo SINE Alu 0 312 1 1755 206 78 64 chr17 8468225 8468867 -76969613 + L1MC5 LINE L1 7308 7958 -3 1341 163 107 24 chr17 8469152 8469404 -76969076 + AluJb SINE Alu 1 273 -39 2329 143 30 21 chr17 8469866 8470293 -76968187 - L1MA6 LINE L1 0 6300 5870 2358 84 0 0 chr17 8470522 8470806 -76967674 - AluSx SINE Alu -24 288 5 1825 134 4 7 chr17 8471552 8471821 -76966659 - AluSx SINE Alu -44 268 1 2894 77 55 10 chr17 8472304 8472720 -76965760 + MLT2A1 LTR ERVL 1 435 -9 272 75 0 25 chr17 8472750 8472790 -76965690 + MLT2A2 LTR ERVL 415 453 0 2228 84 13 27 chr17 8473006 8473305 -76965175 - AluY SINE Alu -16 295 1 317 243 139 35 chr17 8473575 8473748 -76964732 - MIR3 SINE MIR 0 208 18 191 300 0 33 chr17 8473773 8473833 -76964647 - L2 LINE L2 -20 3293 3236 2291 98 10 0 chr17 8474125 8474422 -76964058 + AluSp SINE Alu 1 300 -13 276 248 118 34 chr17 8474514 8474700 -76963780 + MIR SINE MIR 14 260 -2 427 240 19 0 chr17 8475398 8475502 -76962978 - MIR SINE MIR 0 262 157 787 204 127 30 chr17 8475505 8475792 -76962688 - MLT1A2 LTR MaLR 0 374 1 2145 112 10 10 chr17 8475971 8476276 -76962204 + AluSq SINE Alu 1 305 -8 222 37 0 0 chr17 8476287 8476314 -76962166 + (A)n Simple_repeat Simple_repeat 1 27 0 711 232 34 58 chr17 8476993 8477286 -76961194 + L1MC5 LINE L1 5257 5542 -2266 1491 102 0 0 chr17 8477348 8477553 -76960927 - AluSg/x SINE Alu -4 306 102 698 260 29 10 chr17 8477553 8477757 -76960723 - Zaphod DNA AcHobo -3823 208 1 3227 215 93 81 chr17 8477760 8477836 -76960644 + L1MC5 LINE L1 5846 5920 -2041 1790 166 84 0 chr17 8477836 8478156 -76960324 + MER7A DNA MER2_type 1 345 -1 3227 215 93 81 chr17 8478156 8478783 -76959697 + L1MC5 LINE L1 5920 6538 -1423 2422 73 0 0 chr17 8478783 8479084 -76959396 + AluSg SINE Alu 1 301 -9 3227 215 93 81 chr17 8479084 8479963 -76958517 + L1MC5 LINE L1 6538 7405 -556 2036 125 0 10 chr17 8479963 8480266 -76958214 + AluSx SINE Alu 1 300 -12 1905 152 0 29 chr17 8480269 8480617 -76957863 + MER44D DNA MER2_type 1 608 -1 3227 215 93 81 chr17 8480617 8480834 -76957646 + L1MC5 LINE L1 7406 7692 -269 1365 191 0 0 chr17 8480835 8481076 -76957404 - AluJb SINE Alu -14 298 58 594 147 96 6 chr17 8481086 8481242 -76957238 + L1MC5 LINE L1 7681 7850 -111 668 183 15 23 chr17 8481568 8481699 -76956781 + L2 LINE L2 3182 3311 -2 1751 234 97 21 chr17 8481772 8482222 -76956258 + MLT1H1 LTR MaLR 1 496 -59 1668 159 14 3 chr17 8482222 8482518 -76955962 + AluJo SINE Alu 1 299 -13 1751 234 97 21 chr17 8482518 8482583 -76955897 + MLT1H1 LTR MaLR 496 555 0 257 339 49 81 chr17 8482879 8483170 -76955310 + L2 LINE L2 2935 3215 -57 2216 92 0 7 chr17 8483170 8483473 -76955007 + AluY SINE Alu 1 301 -10 257 339 49 81 chr17 8483473 8483526 -76954954 + L2 LINE L2 3215 3268 -4 268 164 29 173 chr17 8483606 8483710 -76954770 + MIR SINE MIR 104 192 -70 1382 266 64 37 chr17 8484088 8484602 -76953878 - MLT1K LTR MaLR -51 537 10 527 233 52 70 chr17 8485020 8485090 -76953390 + MLT1K LTR MaLR 420 490 -98 2271 184 22 11 chr17 8485090 8485552 -76952928 + MLT1C LTR MaLR 1 467 0 527 233 52 70 chr17 8485552 8485653 -76952827 + MLT1K LTR MaLR 490 588 0 201 283 75 0 chr17 8485662 8485715 -76952765 - L2 LINE L2 -47 3225 3169 1093 98 11 6 chr17 8486009 8486183 -76952297 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 510 118 29 10 chr17 8486195 8486297 -76952183 + CT-rich Low_complexity Low_complexity 4 107 0 228 125 0 0 chr17 8486304 8486336 -76952144 + (TC)n Simple_repeat Simple_repeat 1 32 0 1828 155 3 0 chr17 8486336 8486627 -76951853 - AluJb SINE Alu -20 292 1 214 358 74 34 chr17 8486692 8486818 -76951662 + L2 LINE L2 2866 3002 -270 2018 200 40 15 chr17 8486818 8487274 -76951206 - MLT1C LTR MaLR 0 467 1 214 358 74 34 chr17 8487274 8487323 -76951157 + L2 LINE L2 3002 3048 -224 190 317 17 0 chr17 8487424 8487484 -76950996 - MIR SINE MIR -180 82 22 1625 171 13 29 chr17 8487518 8487834 -76950646 + AluJo SINE Alu 1 311 -1 515 146 21 0 chr17 8487834 8487930 -76950550 + GA-rich Low_complexity Low_complexity 2 99 0 964 305 57 9 chr17 8488979 8489297 -76949183 + MLT1I LTR MaLR 59 391 -18 592 285 28 0 chr17 8489301 8489445 -76949035 - MIR SINE MIR -102 160 13 2122 92 27 0 chr17 8489627 8489921 -76948559 + AluSg SINE Alu 1 302 -8 2265 86 0 0 chr17 8490399 8490691 -76947789 - AluSc SINE Alu -16 293 2 474 291 47 0 chr17 8490785 8490799 -76947681 - L1MA10 LINE L1 0 6334 6321 468 305 30 11 chr17 8490799 8491055 -76947425 - L1ME1 LINE L1 -5 6161 5850 2155 84 17 7 chr17 8491633 8491930 -76946550 + AluSg SINE Alu 1 300 -10 908 98 13 173 chr17 8492395 8492493 -76945987 + MER53 DNA DNA 1 45 -144 2174 98 0 0 chr17 8492493 8492779 -76945701 - AluSg SINE Alu -24 286 1 908 98 13 173 chr17 8492779 8492905 -76945575 + MER53 DNA DNA 44 189 0 3483 158 42 56 chr17 8493244 8493932 -76944548 - L1MA7 LINE L1 0 6291 5614 2241 85 13 0 chr17 8493932 8494237 -76944243 - AluSp SINE Alu -4 309 1 3483 158 42 56 chr17 8494237 8494310 -76944170 - L1MA7 LINE L1 -677 5614 5541 420 134 0 0 chr17 8495262 8495344 -76943136 - AluSc SINE Alu 0 309 228 261 0 0 0 chr17 8495363 8495392 -76943088 + (TA)n Simple_repeat Simple_repeat 1 29 0 1939 107 41 0 chr17 8495403 8495693 -76942787 + AluSx SINE Alu 1 302 -10 1324 83 12 132 chr17 8495707 8495757 -76942723 - Tigger2a DNA MER2_type -2465 253 199 668 241 80 0 chr17 8495757 8495919 -76942561 + FAM SINE Alu 1 175 0 1324 83 12 132 chr17 8495919 8496146 -76942334 - Tigger2a DNA MER2_type -2519 199 1 2050 71 45 0 chr17 8496511 8496807 -76941673 - AluY SINE Alu 0 308 1 2609 168 86 19 chr17 8496860 8497385 -76941095 + L1MB3 LINE L1 5617 6176 -7 317 273 68 30 chr17 8497438 8497473 -76941007 - MER103 DNA DNA -11 155 123 288 0 0 0 chr17 8497473 8497505 -76940975 + (CA)n Simple_repeat Simple_repeat 2 33 0 317 273 68 30 chr17 8497505 8497601 -76940879 - MER103 DNA DNA -43 123 19 323 222 26 104 chr17 8497804 8497949 -76940531 - MIR SINE MIR -62 146 30 337 340 47 20 chr17 8498242 8498392 -76940088 - MER5A DNA MER1_type -24 165 1 218 330 18 46 chr17 8498401 8498510 -76939970 - MIR3 SINE MIR -27 181 76 327 257 102 136 chr17 8499366 8499572 -76938908 + MIR SINE MIR 20 218 -44 1313 142 0 5 chr17 8499812 8500023 -76938457 - AluJb SINE Alu -19 293 84 239 95 48 0 chr17 8500056 8500098 -76938382 + T-rich Low_complexity Low_complexity 4 47 0 1465 139 13 0 chr17 8500108 8500345 -76938135 - AluSg/x SINE Alu 0 310 71 496 246 58 105 chr17 8500371 8500482 -76937998 - L1ME LINE L1 -527 5594 5479 1648 112 164 6 chr17 8500482 8500794 -76937686 - MER46B DNA MER2_type 0 236 1 2021 107 52 0 chr17 8500803 8501094 -76937386 - AluSx SINE Alu -6 306 1 496 246 58 105 chr17 8501094 8501229 -76937251 - L1ME LINE L1 -650 5471 5354 2103 117 3 0 chr17 8501229 8501529 -76936951 - AluSq SINE Alu -12 301 1 496 246 58 105 chr17 8501529 8501596 -76936884 - L1ME LINE L1 -767 5354 5285 352 292 169 51 chr17 8501629 8501865 -76936615 - L1ME LINE L1 -852 5294 5031 785 193 28 40 chr17 8501920 8502096 -76936384 - MER3 DNA MER1_type -82 127 1 453 371 42 24 chr17 8502160 8502448 -76936032 - L1ME LINE L1 -1215 4931 4639 299 323 96 76 chr17 8502622 8502913 -76935567 + L2 LINE L2 2971 3267 -5 791 220 18 26 chr17 8503365 8503558 -76934922 + MIR SINE MIR 69 257 -5 1526 122 122 7 chr17 8503558 8503828 -76934652 - AluSg SINE Alu -9 301 1 2374 50 10 0 chr17 8505849 8506149 -76932331 - AluY SINE Alu -8 303 1 4999 68 6 6 chr17 8506269 8506915 -76931565 - L1PA7 LINE L1 0 6154 5509 21 36 0 0 chr17 8506959 8506987 -76931493 + AT_rich Low_complexity Low_complexity 1 28 0 1459 144 20 78 chr17 8506987 8507293 -76931187 - AluJo SINE Alu -24 288 1 743 215 151 13 chr17 8507672 8507959 -76930521 + L1MD3 LINE L1 7238 7484 -511 2011 112 0 0 chr17 8507959 8508235 -76930245 + AluSx SINE Alu 6 281 -31 743 215 151 13 chr17 8508235 8508587 -76929893 + L1MD3 LINE L1 7484 7984 -11 1569 53 0 0 chr17 8508754 8508943 -76929537 - AluSc SINE Alu -5 304 116 1823 60 0 4 chr17 8508944 8509178 -76929302 + AluY SINE Alu 79 311 0 2213 63 18 3 chr17 8509474 8509759 -76928721 + AluY SINE Alu 1 289 -22 1996 117 7 13 chr17 8510192 8510491 -76927989 - AluSx SINE Alu -15 297 1 2021 265 11 40 chr17 8510517 8511071 -76927409 - MER115 DNA AcHobo -5 688 151 425 170 9 38 chr17 8511089 8511195 -76927285 + C-rich Low_complexity Low_complexity 5 107 0 849 142 23 20 chr17 8511310 8511666 -76926814 + C-rich Low_complexity Low_complexity 1 357 0 696 316 22 4 chr17 8511760 8512029 -76926451 - L1M4 LINE L1 -2283 3863 3590 300 285 61 79 chr17 8512057 8512271 -76926209 - L1ME4a LINE L1 -12 6109 5900 286 133 56 33 chr17 8512297 8512387 -76926093 + CT-rich Low_complexity Low_complexity 2 93 0 925 146 38 195 chr17 8512389 8512407 -76926073 - AluJb SINE Alu -1 311 292 1903 158 7 0 chr17 8512407 8512717 -76925763 - AluSx SINE Alu 0 312 1 925 146 38 195 chr17 8512717 8513067 -76925413 - AluJb SINE Alu -20 292 1 271 271 54 42 chr17 8513078 8513244 -76925236 - L1ME4a LINE L1 -1926 5882 5715 509 230 54 108 chr17 8513244 8513466 -76925014 + L2 LINE L2 3104 3313 0 359 303 45 84 chr17 8513474 8513727 -76924753 - L1ME4a LINE L1 -421 5700 5439 971 161 6 12 chr17 8513727 8513888 -76924592 + FRAM SINE Alu 4 163 -3 2000 92 4 7 chr17 8513896 8514177 -76924303 + AluSx SINE Alu 1 280 -32 359 303 45 84 chr17 8514177 8514458 -76924022 - L1ME4a LINE L1 -689 5432 5175 2523 56 0 0 chr17 8514602 8514908 -76923572 - AluY SINE Alu -5 306 1 1471 161 80 18 chr17 8515316 8515590 -76922890 - AluJb SINE Alu -10 292 2 25 0 0 0 chr17 8515737 8515762 -76922718 + AT_rich Low_complexity Low_complexity 1 25 0 530 282 29 18 chr17 8515807 8515977 -76922503 + MER5B DNA MER1_type 1 172 -6 540 264 109 33 chr17 8516011 8516379 -76922101 + L1MC5 LINE L1 7371 7766 -195 2305 81 7 0 chr17 8516380 8516688 -76921792 + AluSx SINE Alu 3 312 0 1059 123 12 0 chr17 8516688 8516850 -76921630 + AluSg/x SINE Alu 131 294 -18 293 262 92 14 chr17 8516896 8517037 -76921443 + L1MC4 LINE L1 7891 8042 0 1803 167 0 3 chr17 8517543 8517855 -76920625 + AluJb SINE Alu 1 311 -1 2398 84 6 0 chr17 8518508 8518819 -76919661 - AluSq SINE Alu 0 313 1 469 277 0 0 chr17 8519315 8519427 -76919053 + MIR SINE MIR 48 159 -103 2047 117 0 10 chr17 8519585 8519885 -76918595 + AluSx SINE Alu 3 299 -13 280 266 130 32 chr17 8520093 8520247 -76918233 + MER5B DNA MER1_type 10 178 0 206 170 21 0 chr17 8520551 8520598 -76917882 - L2 LINE L2 -1035 2279 2232 297 0 0 0 chr17 8521966 8521999 -76916481 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 289 109 57 chr17 8522213 8522424 -76916056 - L2 LINE L2 -195 3077 2856 211 256 0 0 chr17 8522551 8522590 -76915890 + (CG)n Simple_repeat Simple_repeat 1 39 0 525 257 46 20 chr17 8523335 8523511 -76914969 - MLT1F LTR MaLR -376 191 1 369 118 0 0 chr17 8523511 8523561 -76914919 + MLT1F LTR MaLR 493 542 0 2094 102 0 0 chr17 8523681 8524014 -76914466 - AluSq SINE Alu 0 333 1 373 284 9 9 chr17 8524634 8524743 -76913737 + L2 LINE L2 3200 3308 -5 423 326 182 16 chr17 8524996 8525484 -76912996 + L2 LINE L2 1616 2184 -1130 1392 129 5 0 chr17 8525502 8525711 -76912769 - AluJb SINE Alu -17 295 86 360 254 161 51 chr17 8525835 8526052 -76912428 + MLT1I LTR MaLR 122 362 -47 195 100 0 0 chr17 8526054 8526084 -76912396 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 714 272 0 0 chr17 8526084 8526257 -76912223 - L1M4 LINE L1 -2463 3683 3511 193 93 0 47 chr17 8526259 8526302 -76912178 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 263 197 0 0 chr17 8526307 8526368 -76912112 - L1MA9 LINE L1 -7 6305 6245 1178 57 0 86 chr17 8526401 8526576 -76911904 - L1PA7 LINE L1 -7 6147 5988 413 186 106 9 chr17 8526577 8526690 -76911790 - L1MA9 LINE L1 -64 6248 6125 * 2108 211 122 34 chr17 8526684 8526885 -76911595 - L1M4 LINE L1 -2614 3532 3350 4712 138 96 59 chr17 8526885 8527869 -76910611 - LTR28 LTR ERV1 0 1020 1 2108 211 122 34 chr17 8527869 8528542 -76909938 - L1M4 LINE L1 -2796 3350 2585 1181 275 119 43 chr17 8528592 8528824 -76909656 + L2 LINE L2 2236 2449 -865 2373 93 17 0 chr17 8528824 8529114 -76909366 - AluSx SINE Alu -17 295 1 1181 275 119 43 chr17 8529114 8529571 -76908909 + L2 LINE L2 2449 2977 -337 2306 99 3 0 chr17 8529620 8529912 -76908568 - AluSq SINE Alu -20 293 1 321 278 0 11 chr17 8529971 8530061 -76908419 - LTR16B LTR ERVL 0 464 376 274 351 8 15 chr17 8530059 8530190 -76908290 - LTR16B LTR ERVL -285 179 50 * 452 261 21 28 chr17 8531016 8531158 -76907322 + MIR SINE MIR 17 157 -105 320 125 0 0 chr17 8531220 8531268 -76907212 - MER103 DNA DNA -66 100 53 436 287 25 25 chr17 8531610 8531767 -76906713 - MIR3 SINE MIR -3 205 49 2614 53 0 0 chr17 8532560 8532860 -76905620 + AluY SINE Alu 1 300 -11 222 257 95 0 chr17 8533347 8533421 -76905059 + MIR SINE MIR 61 141 -121 2247 87 0 68 chr17 8533431 8533752 -76904728 + AluY SINE Alu 1 299 -12 309 345 31 21 chr17 8533876 8534070 -76904410 + L2 LINE L2 2667 2862 -452 2183 160 15 5 chr17 8534074 8534473 -76904007 + MER57A LTR ERV1 1 403 0 211 214 0 0 chr17 8534601 8534643 -76903837 + MIR SINE MIR 70 111 -151 831 292 154 23 chr17 8534655 8535135 -76903345 + MLT1H LTR MaLR 7 549 0 544 236 8 8 chr17 8535138 8535261 -76903219 + MIR SINE MIR 126 248 -14 225 246 82 16 chr17 8535306 8535367 -76903113 + L2 LINE L2 3188 3252 -20 2315 99 7 0 chr17 8535610 8535903 -76902577 + AluSc SINE Alu 1 295 -14 2091 104 57 0 chr17 8536069 8536348 -76902132 - AluSx SINE Alu -17 295 1 346 308 15 23 chr17 8537596 8537729 -76900751 + MIR SINE MIR 129 260 -2 653 191 0 0 chr17 8537763 8537878 -76900602 + FLAM_A SINE Alu 1 115 -18 920 244 122 70 chr17 8538184 8538299 -76900181 - L2 LINE L2 -1 3312 3204 261 0 0 0 chr17 8538299 8538328 -76900152 + (TG)n Simple_repeat Simple_repeat 1 29 0 2288 71 14 0 chr17 8538329 8538611 -76899869 - AluY SINE Alu -25 286 1 920 244 122 70 chr17 8538611 8539037 -76899443 - L2 LINE L2 -108 3205 2736 1046 229 34 38 chr17 8539149 8539442 -76899038 + MLT1A2 LTR MaLR 1 292 -82 302 279 0 0 chr17 8539467 8539546 -76898934 + L1MC4 LINE L1 7822 7900 -142 1655 179 56 24 chr17 8539575 8539950 -76898530 + MLT1B LTR MaLR 1 387 -3 1687 228 63 31 chr17 8539951 8540008 -76898472 - MLT1F1 LTR MaLR -16 551 497 2198 116 3 0 chr17 8540008 8540300 -76898180 - AluSx SINE Alu -19 293 1 1687 228 63 31 chr17 8540300 8540461 -76898019 - MLT1F1 LTR MaLR -70 497 343 1934 127 3 7 chr17 8540461 8540745 -76897735 + AluSq SINE Alu 1 283 -30 282 29 0 0 chr17 8540748 8540783 -76897697 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1687 228 63 31 chr17 8540783 8541037 -76897443 - MLT1F1 LTR MaLR -225 342 59 6022 121 32 57 chr17 8541039 8542623 -76895857 - pTR5 LTR ERV1 0 2438 743 2270 123 0 0 chr17 8543171 8543472 -76895008 - AluSx SINE Alu -11 301 1 615 200 50 14 chr17 8543615 8543755 -76894725 - MIR SINE MIR -32 230 86 594 205 53 78 chr17 8544348 8544507 -76893973 + LTR37A LTR ERV1 189 341 -85 2206 129 0 10 chr17 8544507 8544817 -76893663 - AluSx SINE Alu -4 308 2 594 205 53 78 chr17 8544817 8544901 -76893579 + LTR37A LTR ERV1 341 426 0 273 340 0 10 chr17 8544927 8545030 -76893450 + L2 LINE L2 2640 2741 -573 1740 138 15 67 chr17 8545454 8545781 -76892699 + AluJb SINE Alu 2 311 -1 330 267 141 30 chr17 8545781 8545916 -76892564 + L2 LINE L2 2741 2890 -424 256 372 35 0 chr17 8546199 8546312 -76892168 + L2 LINE L2 3134 3250 -22 2501 58 0 29 chr17 8546318 8546627 -76891853 - AluY SINE Alu -11 300 1 2588 169 40 33 chr17 8546703 8547302 -76891178 + L1MB7 LINE L1 5573 6175 -9 2530 69 0 0 chr17 8547303 8547606 -76890874 - AluY SINE Alu -8 303 1 1803 156 45 7 chr17 8547886 8548174 -76890306 - AluJo SINE Alu -13 299 1 1894 217 70 4 chr17 8548334 8548794 -76889686 + MLT1E2 LTR MaLR 137 626 0 1734 236 29 87 chr17 8551070 8551723 -76886757 + MLT2F LTR ERVL 3 617 -46 638 109 46 17 chr17 8551745 8551920 -76886560 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 401 80 100 13 chr17 8551940 8552090 -76886390 + (TCTA)n Simple_repeat Simple_repeat 3 165 0 720 89 0 0 chr17 8552090 8552191 -76886289 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 435 19 0 0 chr17 8552191 8552243 -76886237 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 1006 158 27 0 chr17 8552346 8552530 -76885950 - MER5A DNA MER1_type 0 189 1 540 336 0 0 chr17 8552970 8553116 -76885364 - L3 LINE CR1 -719 858 713 312 255 69 44 chr17 8553318 8553339 -76885141 + L1M4 LINE L1 1230 1249 -5395 2105 98 46 0 chr17 8553339 8553624 -76884856 + AluSq SINE Alu 16 313 0 312 255 69 44 chr17 8553624 8553749 -76884731 + L1M4 LINE L1 1249 3695 -2949 2163 133 0 13 chr17 8554364 8554679 -76883801 - AluSx SINE Alu -1 311 1 267 213 21 117 chr17 8555121 8555215 -76883265 + MIR3 SINE MIR 88 172 -36 4707 106 13 4 chr17 8555224 8555923 -76882557 + L1PA13 LINE L1 5418 6122 -41 1201 59 0 0 chr17 8555925 8556060 -76882420 + AluY SINE Alu 1 135 -176 2768 26 3 0 chr17 8556061 8556366 -76882114 + AluY SINE Alu 1 306 -5 22 0 0 0 chr17 8556388 8556410 -76882070 + AT_rich Low_complexity Low_complexity 1 22 0 274 286 0 0 chr17 8556518 8556595 -76881885 - MIR SINE MIR -105 157 81 2320 88 7 0 chr17 8557548 8557831 -76880649 - AluSq SINE Alu -28 285 1 1780 194 53 45 chr17 8557902 8558371 -76880109 + Charlie1b DNA MER1_type 19 491 -32 636 100 0 0 chr17 8558608 8558698 -76879782 - AluS SINE Alu -222 91 2 449 180 56 0 chr17 8558699 8558788 -76879692 - MER113 DNA MER1_type? -203 318 225 722 232 73 6 chr17 8558863 8559040 -76879440 + MER5A DNA MER1_type 1 189 0 258 81 0 0 chr17 8559337 8559374 -76879106 + (TG)n Simple_repeat Simple_repeat 1 37 0 23 0 0 0 chr17 8559405 8559428 -76879052 + GC_rich Low_complexity Low_complexity 1 23 0 504 229 39 50 chr17 8559887 8560066 -76878414 - MER5B DNA MER1_type -1 177 1 262 319 18 98 chr17 8560108 8560271 -76878209 - L2 LINE L2 -8 3264 3115 459 209 5 53 chr17 8560953 8561140 -76877340 + GA-rich Low_complexity Low_complexity 3 180 0 560 185 105 136 chr17 8561320 8561644 -76876836 + L1MC5 LINE L1 6835 7148 -813 506 182 31 8 chr17 8561661 8561777 -76876703 - L1ME3 LINE L1 -177 5985 5883 * 708 234 99 73 chr17 8561772 8561877 -76876603 + L1MC5 LINE L1 7513 7614 -347 1764 165 0 34 chr17 8561877 8562168 -76876312 - AluJb SINE Alu -31 281 1 708 234 99 73 chr17 8562168 8562447 -76876033 + L1MC5 LINE L1 7614 7907 -54 2500 73 0 3 chr17 8562507 8562807 -76875673 - AluSg SINE Alu -11 299 1 227 282 119 30 chr17 8563155 8563357 -76875123 - L2 LINE L2 -639 2675 2456 2459 94 0 0 chr17 8563578 8563885 -76874595 - AluSq SINE Alu -6 307 1 2325 69 10 3 chr17 8564265 8564554 -76873926 + AluSq SINE Alu 15 305 -8 362 331 28 17 chr17 8564843 8565021 -76873459 + MIR SINE MIR 63 242 -20 266 293 16 8 chr17 8565142 8565265 -76873215 + (CA)n Simple_repeat Simple_repeat 2 125 0 315 348 56 28 chr17 8566730 8566908 -76871572 - MER5A DNA MER1_type 0 189 7 180 77 0 0 chr17 8567370 8567396 -76871084 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2449 87 0 0 chr17 8569416 8569725 -76868755 - AluSx SINE Alu -3 309 1 279 54 0 0 chr17 8570874 8570911 -76867569 + (TTCCC)n Simple_repeat Simple_repeat 4 40 0 333 187 47 65 chr17 8571054 8571133 -76867347 + Tigger2 DNA MER2_type 2614 2692 -26 181 0 33 33 chr17 8571133 8571163 -76867317 + (CCCCCG)n Simple_repeat Simple_repeat 4 33 0 333 187 47 65 chr17 8571163 8571190 -76867290 + Tigger2 DNA MER2_type 2692 2718 0 2375 93 3 10 chr17 8571851 8572163 -76866317 + AluSg SINE Alu 1 310 0 3308 163 38 52 chr17 8573118 8573191 -76865289 + L1MA7 LINE L1 5541 5614 -677 2403 88 13 0 chr17 8573191 8573497 -76864983 + AluSp SINE Alu 1 310 -3 3308 163 38 52 chr17 8573497 8574185 -76864295 + L1MA7 LINE L1 5614 6291 0 927 99 14 127 chr17 8574524 8574650 -76863830 - MER53 DNA DNA 0 189 95 2308 111 0 0 chr17 8574650 8574948 -76863532 + AluSg SINE Alu 1 298 -12 927 99 14 127 chr17 8574948 8575034 -76863446 - MER53 DNA DNA -94 95 1 2297 81 17 10 chr17 8575499 8575796 -76862684 - AluSg SINE Alu -11 299 1 489 298 28 18 chr17 8576358 8576631 -76861849 + L1ME1 LINE L1 5835 6161 -5 2417 86 0 0 chr17 8576739 8577031 -76861449 + AluSc SINE Alu 2 293 -16 2245 99 27 0 chr17 8577509 8577803 -76860677 - AluSg SINE Alu -8 302 1 592 285 28 0 chr17 8577985 8578129 -76860351 + MIR SINE MIR 13 160 -102 964 305 57 9 chr17 8578133 8578451 -76860029 - MLT1I LTR MaLR -18 391 59 1605 174 13 29 chr17 8579490 8579904 -76858576 - AluJo SINE Alu 0 409 1 190 317 17 0 chr17 8579938 8579998 -76858482 + MIR SINE MIR 22 82 -180 230 352 74 34 chr17 8580099 8580148 -76858332 - L2 LINE L2 -224 3048 3002 2018 200 40 15 chr17 8580148 8580604 -76857876 + MLT1C LTR MaLR 1 467 0 230 352 74 34 chr17 8580604 8580730 -76857750 - L2 LINE L2 -270 3002 2866 1828 155 3 0 chr17 8580795 8581086 -76857394 + AluJb SINE Alu 1 292 -20 228 125 0 0 chr17 8581086 8581118 -76857362 + (GA)n Simple_repeat Simple_repeat 1 32 0 474 122 31 10 chr17 8581125 8581223 -76857257 + GA-rich Low_complexity Low_complexity 4 103 0 1232 88 0 6 chr17 8581244 8581425 -76857055 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 201 283 75 0 chr17 8581719 8581772 -76856708 + L2 LINE L2 3169 3225 -47 527 233 52 70 chr17 8581781 8581882 -76856598 - MLT1K LTR MaLR 0 588 490 2271 184 22 11 chr17 8581882 8582344 -76856136 - MLT1C LTR MaLR 0 467 1 527 233 52 70 chr17 8582344 8582414 -76856066 - MLT1K LTR MaLR -98 490 420 1382 266 64 37 chr17 8582832 8583346 -76855134 + MLT1K LTR MaLR 10 537 -51 268 164 29 173 chr17 8583724 8583828 -76854652 - MIR SINE MIR -70 192 104 244 342 49 81 chr17 8583908 8583961 -76854519 - L2 LINE L2 -4 3268 3215 2216 92 0 7 chr17 8583961 8584264 -76854216 - AluY SINE Alu -10 301 1 244 342 49 81 chr17 8584264 8584555 -76853925 - L2 LINE L2 -57 3215 2935 1741 234 97 21 chr17 8584850 8584915 -76853565 - MLT1H1 LTR MaLR 0 555 496 1668 159 14 3 chr17 8584915 8585211 -76853269 - AluJo SINE Alu -13 299 1 1741 234 97 21 chr17 8585211 8585661 -76852819 - MLT1H1 LTR MaLR -59 496 1 668 183 15 23 chr17 8585734 8585865 -76852615 - L2 LINE L2 -2 3311 3182 594 147 96 6 chr17 8586191 8586347 -76852133 - L1MC5 LINE L1 -111 7850 7681 1365 191 0 0 chr17 8586357 8586598 -76851882 + AluJb SINE Alu 58 298 -14 429 190 156 83 chr17 8586599 8586804 -76851676 - L1MC5 LINE L1 -269 7692 7473 1893 155 0 29 chr17 8586816 8587164 -76851316 - MER44D DNA MER2_type -1 608 1 1232 114 5 35 chr17 8587167 8587368 -76851112 - AluSg/x SINE Alu -12 300 106 410 268 99 23 chr17 8587570 8587770 -76850710 - MIR SINE MIR -49 213 8 274 294 24 12 chr17 8588214 8588299 -76850181 - L2 LINE L2 -1 3271 3186 441 308 38 25 chr17 8588411 8588570 -76849910 + MIR SINE MIR 13 173 -89 960 96 0 15 chr17 8589274 8589409 -76849071 - FLAM_C SINE Alu 0 133 1 250 118 20 39 chr17 8590950 8591001 -76847479 - L2 LINE L2 -22 3250 3201 445 299 33 33 chr17 8591009 8591193 -76847287 + MIR3 SINE MIR 20 203 -5 2170 107 3 3 chr17 8591206 8591506 -76846974 + AluSp SINE Alu 1 300 -13 251 259 0 0 chr17 8591611 8591669 -76846811 - MIR3 SINE MIR -4 204 147 291 331 16 24 chr17 8591718 8591842 -76846638 + MARNA DNA Mariner 81 203 -383 311 317 61 43 chr17 8591981 8592145 -76846335 + HAL1b LINE L1 498 664 -684 1223 307 92 57 chr17 8592226 8593184 -76845296 + L1M4 LINE L1 4304 5294 -852 815 252 25 80 chr17 8593227 8593501 -76844979 + MIR SINE MIR 2 260 -2 4066 57 2 2 chr17 8593514 8594023 -76844457 + L1PA8 LINE L1 5660 6168 -4 265 247 26 26 chr17 8594566 8594643 -76843837 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 8594943 8595037 -76843443 + (GA)n Simple_repeat Simple_repeat 1 96 0 565 279 32 20 chr17 8595410 8595611 -76842869 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 8596292 8596884 -76841596 + (CA)n Simple_repeat Simple_repeat 1 588 0 878 302 20 24 chr17 8597744 8597999 -76840481 - MIR SINE MIR -6 256 3 2310 72 0 10 chr17 8598081 8598388 -76840092 + AluY SINE Alu 1 304 -7 1270 103 0 0 chr17 8598400 8598574 -76839906 + AluJb SINE Alu 134 307 -5 838 199 4 108 chr17 8599323 8599554 -76838926 + MIR SINE MIR 36 242 -20 1950 91 12 75 chr17 8599592 8599923 -76838557 - AluSx SINE Alu -2 310 1 373 241 0 36 chr17 8600587 8600670 -76837810 + L2 LINE L2 3185 3264 -49 261 200 20 0 chr17 8600675 8600725 -76837755 - L2 LINE L2 -38 3275 3225 251 239 45 102 chr17 8600722 8600761 -76837719 - L2 LINE L2 -248 3065 3025 * 2258 91 0 3 chr17 8600761 8601059 -76837421 - AluSc SINE Alu -12 297 1 251 239 45 102 chr17 8601059 8601107 -76837373 - L2 LINE L2 -288 3025 2983 1151 206 3 57 chr17 8601326 8601494 -76836986 + L1M4 LINE L1 2626 2773 -3373 2225 91 0 0 chr17 8601494 8601791 -76836689 - AluSx SINE Alu -15 297 1 1151 206 3 57 chr17 8601791 8601918 -76836562 + L1M4 LINE L1 2773 2905 -3241 1152 125 0 27 chr17 8603316 8603500 -76834980 + FRAM SINE Alu 1 176 0 1365 82 6 0 chr17 8603866 8604049 -76834431 - AluSp SINE Alu -129 184 1 514 158 0 0 chr17 8604049 8604218 -76834262 - L1M4 LINE L1 -1763 4383 4185 240 171 0 0 chr17 8604218 8604252 -76834228 - MLT1C LTR MaLR 0 467 434 388 118 0 0 chr17 8604252 8604303 -76834177 - Tigger5 DNA MER2_type 0 2323 2273 2240 93 0 10 chr17 8604311 8604613 -76833867 - AluSx SINE Alu -13 299 1 1622 238 36 19 chr17 8604648 8605110 -76833370 - MLT1C LTR MaLR -33 593 11 231 229 0 0 chr17 8605233 8605294 -76833186 + C-rich Low_complexity Low_complexity 5 65 0 229 339 12 24 chr17 8605304 8605469 -76833011 + L1M4 LINE L1 4497 4659 -1487 294 282 49 14 chr17 8605776 8605918 -76832562 + L1M4 LINE L1 4801 4947 -1199 1232 222 43 49 chr17 8606177 8606227 -76832253 + MLT1A1 LTR MaLR 1 50 -315 2483 106 17 0 chr17 8606227 8606576 -76831904 - THE1A LTR MaLR 0 355 1 1232 222 43 49 chr17 8606576 8606854 -76831626 + MLT1A1 LTR MaLR 50 327 -38 844 159 53 0 chr17 8606850 8607001 -76831479 + MLT1A1 LTR MaLR 207 365 0 * 289 185 96 25 chr17 8607001 8607186 -76831294 - L1MC/D LINE L1 -761 5410 5254 1743 141 7 33 chr17 8607500 8607670 -76830810 - AluJb SINE Alu -16 296 136 2057 94 0 24 chr17 8607670 8607968 -76830512 - AluSc SINE Alu -18 291 1 1743 141 7 33 chr17 8607968 8608101 -76830379 - AluJb SINE Alu -176 136 1 1717 127 0 0 chr17 8608517 8608769 -76829711 + AluSq SINE Alu 9 260 -53 207 0 0 0 chr17 8608792 8608815 -76829665 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2138 92 0 0 chr17 8608831 8609137 -76829343 + AluY SINE Alu 1 306 0 1119 155 5 0 chr17 8611212 8611412 -76827068 - AluJb SINE Alu -25 287 87 645 165 24 24 chr17 8612105 8612232 -76826248 + AluJo SINE Alu 2 128 -174 206 234 0 0 chr17 8612518 8612565 -76825915 + L2 LINE L2 3267 3313 0 1363 191 39 11 chr17 8612715 8612997 -76825483 + AluJo SINE Alu 11 300 -12 1012 163 0 0 chr17 8614475 8614641 -76823839 + AluJo SINE Alu 137 302 0 230 0 33 0 chr17 8615290 8615320 -76823160 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 791 229 0 0 chr17 8615320 8615464 -76823016 - FRAM SINE Alu -32 144 1 180 0 0 0 chr17 8616169 8616189 -76822291 + (TC)n Simple_repeat Simple_repeat 2 21 0 1724 122 0 8 chr17 8616189 8616443 -76822037 - AluSc SINE Alu -17 292 41 1413 207 7 0 chr17 8617748 8618033 -76820447 + AluJo SINE Alu 1 287 -25 545 350 66 34 chr17 8618172 8618609 -76819871 - L3 LINE CR1 -156 1421 971 998 195 0 0 chr17 8618662 8618852 -76819628 + AluJb SINE Alu 6 195 -117 277 245 21 0 chr17 8618894 8618973 -76819507 - MER5A DNA MER1_type -32 146 65 1495 175 3 7 chr17 8619217 8619503 -76818977 + AluJb SINE Alu 13 297 -15 383 340 72 30 chr17 8619570 8619805 -76818675 + L1 LINE L1 4538 4782 -1364 1509 174 57 63 chr17 8620416 8620462 -76818018 + MLT1A1 LTR MaLR 1 46 -319 2620 99 3 3 chr17 8620462 8620817 -76817663 - THE1A LTR MaLR 0 355 1 1509 174 57 63 chr17 8620817 8621137 -76817343 + MLT1A1 LTR MaLR 46 365 0 322 200 0 0 chr17 8621137 8621192 -76817288 - L1MC/D LINE L1 -2305 6001 5947 1881 145 7 0 chr17 8621629 8621925 -76816555 - AluJb SINE Alu -14 298 1 1979 129 0 7 chr17 8622337 8622631 -76815849 + AluSx SINE Alu 3 294 -18 2107 94 0 7 chr17 8622753 8623041 -76815439 - AluY SINE Alu -25 286 1 4089 153 11 25 chr17 8623177 8623299 -76815181 - L1MB2 LINE L1 -2 6169 6047 2355 73 0 3 chr17 8623299 8623602 -76814878 + AluY SINE Alu 1 302 -9 4089 153 11 25 chr17 8623602 8624226 -76814254 - L1MB2 LINE L1 -124 6047 5434 383 299 102 16 chr17 8624356 8624483 -76813997 - L2 LINE L2 -7 3306 3169 1419 191 0 47 chr17 8625722 8626052 -76812428 - AluJb SINE Alu 0 316 1 23 0 0 0 chr17 8626278 8626301 -76812179 + AT_rich Low_complexity Low_complexity 1 23 0 227 252 148 30 chr17 8626603 8626738 -76811742 - MIR3 SINE MIR -4 204 54 3947 67 12 2 chr17 8626874 8627382 -76811098 + LTR10D LTR ERV1 1 513 0 1684 162 28 99 chr17 8627591 8627985 -76810495 + MLT1A2 LTR MaLR 1 366 -8 488 322 91 91 chr17 8628196 8628809 -76809671 + L1MEd LINE L1 683 1420 -1070 822 285 142 19 chr17 8628848 8629321 -76809159 - L1MC4a LINE L1 -1661 6147 5617 417 262 88 59 chr17 8629324 8629510 -76808970 - L1MC/D LINE L1 -775 5869 5690 2639 58 0 0 chr17 8629510 8629819 -76808661 - AluY SINE Alu -2 309 1 1671 168 7 34 chr17 8629826 8630124 -76808356 - AluJb SINE Alu -22 290 1 417 262 88 59 chr17 8630124 8630269 -76808211 - L1MC/D LINE L1 -959 5685 5520 2130 118 7 3 chr17 8630274 8630571 -76807909 - AluJb SINE Alu -14 298 1 236 290 39 32 chr17 8630574 8630729 -76807751 - L1MC/D LINE L1 -1103 5541 5386 2356 114 0 3 chr17 8631031 8631337 -76807143 - AluSx SINE Alu -7 305 1 1636 110 24 12 chr17 8631358 8631613 -76806867 - L1MA2 LINE L1 0 6304 6047 287 243 0 9 chr17 8631613 8631720 -76806760 - L1MC/D LINE L1 -1641 5003 4898 510 246 130 19 chr17 8631735 8631950 -76806530 + HAL1 LINE L1 1431 1669 -838 3591 238 28 40 chr17 8631983 8633313 -76805167 - L1MC/D LINE L1 -4314 2511 1166 2438 80 0 0 chr17 8633313 8633614 -76804866 - AluY SINE Alu -10 301 1 3591 238 28 40 chr17 8633614 8633635 -76804845 - L1MC/D LINE L1 -5659 1166 1146 1494 175 46 103 chr17 8633635 8634020 -76804460 + MSTB1 LTR MaLR 1 357 -75 1798 188 0 3 chr17 8634020 8634323 -76804157 - AluJo SINE Alu -6 306 5 1494 175 46 103 chr17 8634323 8634395 -76804085 + MSTB1 LTR MaLR 357 432 0 3591 238 28 40 chr17 8634395 8634565 -76803915 - L1MC/D LINE L1 -5679 1146 880 2011 253 55 67 chr17 8634620 8635506 -76802974 - L1MC/D LINE L1 -5653 889 14 433 273 131 22 chr17 8636062 8636520 -76801960 + L1ME2 LINE L1 2113 2620 -3526 527 258 85 51 chr17 8636587 8637022 -76801458 + L1ME2 LINE L1 2750 3199 -2947 237 200 0 18 chr17 8637120 8637175 -76801305 - MLT1L LTR MaLR -205 410 357 247 171 12 110 chr17 8637297 8637379 -76801101 - MLT1L LTR MaLR -534 81 8 1208 279 98 83 chr17 8637379 8637830 -76800650 + L1ME2 LINE L1 3356 3799 -2347 2446 87 0 3 chr17 8637830 8638130 -76800350 + AluSq SINE Alu 1 299 -14 1208 279 98 83 chr17 8638130 8638319 -76800161 + L1ME2 LINE L1 3799 3984 -2162 1102 174 190 28 chr17 8638319 8638566 -76799914 + AluJo SINE Alu 2 288 -14 1208 279 98 83 chr17 8638566 8639059 -76799421 + L1ME2 LINE L1 3984 4468 -1678 2468 65 0 0 chr17 8639059 8639375 -76799105 + AluY SINE Alu 1 316 0 1208 279 98 83 chr17 8639375 8640188 -76798292 + L1ME2 LINE L1 4468 5334 -812 6501 142 42 85 chr17 8640313 8641518 -76796962 + L1MCa LINE L1 21 1162 -5264 2356 92 0 3 chr17 8641518 8641822 -76796658 + AluSg SINE Alu 1 303 -7 6501 142 42 85 chr17 8641822 8641965 -76796515 + L1MCa LINE L1 1162 1310 -5116 3187 138 7 41 chr17 8641964 8642285 -76796195 - L1M3 LINE L1 -363 5820 5531 * 1858 137 32 0 chr17 8642285 8642582 -76795898 - AluSx SINE Alu 0 306 1 3187 138 7 41 chr17 8642582 8642932 -76795548 - L1M3 LINE L1 -652 5531 5171 329 227 9 45 chr17 8644988 8645098 -76793382 - MIR3 SINE MIR -18 190 85 2665 114 62 0 chr17 8645130 8645533 -76792947 - MSTC LTR MaLR 0 428 1 2319 60 20 27 chr17 8645816 8645992 -76792488 - AluY SINE Alu -12 299 124 225 0 0 0 chr17 8645992 8646017 -76792463 + (TG)n Simple_repeat Simple_repeat 2 26 0 2319 60 20 27 chr17 8646017 8646141 -76792339 - AluY SINE Alu -187 124 1 351 258 42 42 chr17 8646606 8646726 -76791754 + MIR SINE MIR 32 151 -111 204 290 21 21 chr17 8647037 8647130 -76791350 + MIR SINE MIR 104 196 -66 448 275 22 0 chr17 8647339 8647477 -76791003 + MER103 DNA DNA 23 163 -3 2236 205 4 52 chr17 8649393 8649453 -76789027 + L1ME2 LINE L1 5382 5443 -723 1397 180 134 10 chr17 8649453 8649758 -76788722 - MER2 DNA MER2_type 0 344 2 2236 205 4 52 chr17 8649758 8650199 -76788281 + L1ME2 LINE L1 5443 5859 -307 994 211 119 144 chr17 8650209 8650938 -76787542 + MER21B LTR ERV1 9 719 -144 271 181 110 40 chr17 8650938 8651039 -76787441 + L1ME2 LINE L1 5870 5986 -180 300 127 55 0 chr17 8651098 8651153 -76787327 + L1MA10 LINE L1 6277 6334 0 2612 62 0 0 chr17 8651436 8651745 -76786735 + AluY SINE Alu 1 309 -2 22 0 0 0 chr17 8651746 8651768 -76786712 + AT_rich Low_complexity Low_complexity 1 22 0 335 41 20 0 chr17 8651906 8651955 -76786525 + (TG)n Simple_repeat Simple_repeat 2 51 0 206 288 27 41 chr17 8651971 8652044 -76786436 + L2 LINE L2 3151 3222 -50 728 241 80 44 chr17 8652469 8652718 -76785762 + MIR SINE MIR 2 259 -3 259 221 93 48 chr17 8652793 8652907 -76785573 - MER5A DNA MER1_type -14 165 39 195 256 150 25 chr17 8652952 8653094 -76785386 + MIR SINE MIR 29 189 -73 253 275 99 28 chr17 8653197 8653339 -76785141 + MLT1J LTR MaLR 5 156 -355 1820 146 11 7 chr17 8653370 8653677 -76784803 - AluJo SINE Alu 0 312 11 500 260 111 37 chr17 8653728 8653971 -76784509 + MLT1L LTR MaLR 224 560 -55 2093 101 0 28 chr17 8654040 8654374 -76784106 + AluSc SINE Alu 1 326 0 2343 87 0 0 chr17 8654978 8655264 -76783216 - AluSc SINE Alu -23 286 1 180 111 0 0 chr17 8657751 8657778 -76780702 + (CGGGGG)n Simple_repeat Simple_repeat 3 29 0 407 245 7 135 chr17 8658020 8658302 -76780178 + L2 LINE L2 2978 3223 -90 416 293 8 8 chr17 8658325 8658448 -76780032 - LTR16A LTR ERVL -264 186 64 2408 83 0 3 chr17 8658771 8659071 -76779409 + AluY SINE Alu 1 299 -12 984 104 7 14 chr17 8660383 8660527 -76777953 + FLAM_C SINE Alu 1 143 0 2270 96 13 22 chr17 8660539 8660851 -76777629 + AluSx SINE Alu 1 309 -3 764 176 21 21 chr17 8660855 8660997 -76777483 + AluJb SINE Alu 131 272 -40 201 366 42 0 chr17 8663202 8663273 -76775207 - L3b LINE CR1 0 1583 1510 * 325 217 245 35 chr17 8663259 8663402 -76775078 - MER5B DNA MER1_type -5 173 1 711 199 226 5 chr17 8663549 8663735 -76774745 + MIR SINE MIR 16 242 -20 2283 109 0 7 chr17 8664036 8664338 -76774142 + AluSx SINE Alu 1 300 -12 303 253 74 0 chr17 8665554 8665649 -76772831 + L3 LINE CR1 1342 1443 -134 299 285 21 90 chr17 8665928 8666072 -76772408 - L2 LINE L2 -219 3053 2920 646 180 9 0 chr17 8666308 8666419 -76772061 - MER81 DNA DNA 0 114 3 298 239 67 67 chr17 8666605 8666739 -76771741 - MIR SINE MIR -8 254 121 454 177 25 0 chr17 8666759 8666838 -76771642 - MER2 DNA MER2_type -264 81 1 535 224 80 0 chr17 8666840 8666965 -76771515 - MIR SINE MIR -116 146 12 202 380 107 10 chr17 8666977 8667285 -76771195 - L2 LINE L2 -957 2357 2020 2018 228 25 0 chr17 8667461 8667895 -76770585 + L1PA15-16 LINE L1 2445 2889 -3960 1224 142 0 71 chr17 8667899 8668111 -76770369 + AluJb SINE Alu 1 197 -115 1339 184 82 3 chr17 8668114 8668430 -76770050 + L1 LINE L1 2881 3221 -3628 2395 110 42 20 chr17 8668434 8668790 -76769690 - THE1B LTR MaLR 0 364 1 11908 78 25 5 chr17 8668790 8670339 -76768141 - THE1B-int LTR MaLR 0 1580 1 2357 94 50 20 chr17 8670347 8670688 -76767792 - THE1B LTR MaLR -13 351 1 8146 194 13 11 chr17 8670688 8672387 -76766093 + L1 LINE L1 3221 4922 -1927 2373 99 0 0 chr17 8672618 8672920 -76765560 - AluSg SINE Alu -8 302 1 1053 257 43 36 chr17 8672993 8673409 -76765071 + HAL1 LINE L1 1116 1534 -973 2209 90 0 0 chr17 8673644 8673923 -76764557 + AluSc SINE Alu 17 295 -14 1281 283 76 35 chr17 8674095 8674161 -76764319 + L1MEd LINE L1 330 392 -5727 186 43 0 0 chr17 8674161 8674184 -76764296 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 1281 283 76 35 chr17 8674184 8674658 -76763822 + L1MEd LINE L1 392 892 -5227 450 144 222 78 chr17 8674678 8674831 -76763649 + MER104 DNA Tc2 6 180 0 346 278 148 60 chr17 8675035 8675722 -76762758 + L1ME4a LINE L1 5330 6077 -44 2233 93 4 0 chr17 8675764 8676076 -76762404 + AluSg SINE Alu 1 313 0 207 100 0 0 chr17 8676311 8676341 -76762139 + (T)n Simple_repeat Simple_repeat 1 30 0 2199 128 0 0 chr17 8676769 8677065 -76761415 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 8678048 8678069 -76760411 + AT_rich Low_complexity Low_complexity 1 21 0 231 204 0 0 chr17 8678073 8678122 -76760358 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 228 200 18 0 chr17 8678122 8678177 -76760303 - L1MCa LINE L1 -4362 2064 2009 216 216 0 0 chr17 8678183 8678234 -76760246 + (TA)n Simple_repeat Simple_repeat 1 51 0 330 218 0 89 chr17 8678241 8678342 -76760138 + L1MC4 LINE L1 6614 6705 -1337 1379 83 10 42 chr17 8678357 8678550 -76759930 - AluSg/x SINE Alu -20 292 106 347 278 43 71 chr17 8678793 8678952 -76759528 - MIR SINE MIR -62 146 8 272 296 74 9 chr17 8679396 8679504 -76758976 - L2 LINE L2 -1 3312 3198 440 308 38 25 chr17 8679593 8679752 -76758728 + MIR SINE MIR 13 173 -89 975 96 0 15 chr17 8680455 8680590 -76757890 - FLAM_C SINE Alu 0 133 1 252 118 20 39 chr17 8682131 8682182 -76756298 - L2 LINE L2 -22 3250 3201 453 299 33 33 chr17 8682190 8682374 -76756106 + MIR3 SINE MIR 20 203 -5 2323 107 3 3 chr17 8682387 8682687 -76755793 + AluSp SINE Alu 1 300 -13 252 259 0 0 chr17 8682792 8682850 -76755630 - MIR3 SINE MIR -4 204 147 267 331 16 24 chr17 8682899 8683023 -76755457 + MARNA DNA Mariner 81 203 -383 316 317 61 43 chr17 8683162 8683326 -76755154 + HAL1b LINE L1 498 664 -684 1287 302 96 62 chr17 8683407 8684365 -76754115 + L1M4 LINE L1 4304 5294 -852 827 259 25 80 chr17 8684408 8684682 -76753798 + MIR SINE MIR 2 260 -2 4067 57 2 2 chr17 8684695 8685204 -76753276 + L1PA8 LINE L1 5660 6168 -4 266 247 26 26 chr17 8685747 8685824 -76752656 + MIR SINE MIR 60 136 -72 661 53 21 0 chr17 8686124 8686218 -76752262 + (GA)n Simple_repeat Simple_repeat 1 96 0 568 279 32 20 chr17 8686591 8686792 -76751688 + MIR SINE MIR 1 208 -54 629 218 0 5 chr17 8687473 8688065 -76750415 + (CA)n Simple_repeat Simple_repeat 1 588 0 887 302 20 24 chr17 8688925 8689180 -76749300 - MIR SINE MIR -6 256 3 2457 72 0 10 chr17 8689262 8689569 -76748911 + AluY SINE Alu 1 304 -7 1354 103 0 0 chr17 8689581 8689755 -76748725 + AluJb SINE Alu 134 307 -5 835 199 4 108 chr17 8690504 8690735 -76747745 + MIR SINE MIR 36 242 -20 2094 91 12 75 chr17 8690773 8691104 -76747376 - AluSx SINE Alu -2 310 1 374 241 0 36 chr17 8691768 8691851 -76746629 + L2 LINE L2 3185 3264 -49 257 196 22 0 chr17 8691856 8691902 -76746578 - L2 LINE L2 -38 3275 3229 717 232 20 111 chr17 8691903 8691942 -76746538 - L2 LINE L2 -248 3065 3024 2404 91 0 3 chr17 8691942 8692240 -76746240 - AluSc SINE Alu -12 297 1 717 232 20 111 chr17 8692240 8692287 -76746193 - L2 LINE L2 -289 3024 2974 2319 68 41 3 chr17 8692287 8692579 -76745901 + AluY SINE Alu 1 303 -8 717 232 20 111 chr17 8692579 8692793 -76745687 - L2 LINE L2 -339 2974 2810 1519 187 37 30 chr17 8692793 8693093 -76745387 - AluJo SINE Alu -10 302 1 717 232 20 111 chr17 8693093 8693154 -76745326 - L2 LINE L2 -503 2810 2745 2242 113 0 0 chr17 8693245 8693538 -76744942 - AluSx SINE Alu -19 293 1 231 207 184 23 chr17 8694022 8694109 -76744371 - Charlie8 DNA MER1_type -2141 276 176 184 153 0 68 chr17 8695330 8695389 -76743091 + GA-rich Low_complexity Low_complexity 2 56 0 675 212 16 22 chr17 8696675 8696859 -76741621 - MER113 DNA MER1_type? -304 217 35 2263 128 0 0 chr17 8697466 8697778 -76740702 + AluSx SINE Alu 1 312 0 375 219 27 0 chr17 8698305 8698378 -76740102 - MER113 DNA MER1_type? -5 516 442 410 167 2 98 chr17 8698418 8699093 -76739387 + (TA)n Simple_repeat Simple_repeat 1 610 0 260 57 0 0 chr17 8699101 8699136 -76739344 - MADE1 DNA Mariner 0 80 46 2377 88 0 0 chr17 8699136 8699152 -76739328 - AluY SINE Alu -14 297 282 180 0 0 0 chr17 8699152 8699172 -76739308 + (TG)n Simple_repeat Simple_repeat 1 20 0 2377 88 0 0 chr17 8699172 8699452 -76739028 - AluY SINE Alu -28 283 1 27 0 0 0 chr17 8699500 8699527 -76738953 + AT_rich Low_complexity Low_complexity 1 27 0 226 231 0 131 chr17 8699582 8699640 -76738840 - MER113 DNA MER1_type? -402 119 86 2017 171 72 22 chr17 8699640 8700084 -76738396 + MER31B LTR ERV1 1 466 0 226 231 0 131 chr17 8700084 8700155 -76738325 - MER113 DNA MER1_type? -435 86 7 357 276 117 41 chr17 8700156 8700237 -76738243 + LTR16B LTR ERVL 1 74 -390 2501 117 57 29 chr17 8700237 8700657 -76737823 + MSTB1 LTR MaLR 1 432 0 357 276 117 41 chr17 8700657 8700972 -76737508 + LTR16B LTR ERVL 74 464 0 209 140 0 40 chr17 8701475 8701525 -76736955 + (CGGGG)n Simple_repeat Simple_repeat 2 49 0 23 54 0 0 chr17 8701901 8701938 -76736542 + GC_rich Low_complexity Low_complexity 1 37 0 251 179 60 0 chr17 8702929 8702996 -76735484 + G-rich Low_complexity Low_complexity 4 74 0 1660 163 0 45 chr17 8702998 8703287 -76735193 - AluJb SINE Alu -36 276 1 361 293 63 26 chr17 8703339 8703530 -76734950 - HAL1b LINE L1 -669 679 482 181 313 47 0 chr17 8703548 8703612 -76734868 + MIR SINE MIR 166 232 -30 699 117 27 0 chr17 8703688 8703799 -76734681 - FRAM SINE Alu -6 170 57 800 177 61 61 chr17 8703880 8703950 -76734530 - AluJo SINE Alu -130 182 113 2304 85 6 38 chr17 8703950 8704266 -76734214 - AluY SINE Alu -5 306 1 800 177 61 61 chr17 8704266 8704376 -76734104 - AluJo SINE Alu -198 114 2 292 381 45 0 chr17 8704499 8704633 -76733847 + MIR3 SINE MIR 50 189 -19 3902 142 24 39 chr17 8704676 8705155 -76733325 + L1MB8 LINE L1 5432 5898 -280 2309 104 0 3 chr17 8705155 8705463 -76733017 + AluSc SINE Alu 1 307 -2 3902 142 24 39 chr17 8705463 8705736 -76732744 + L1MB8 LINE L1 5898 6173 -5 293 320 50 30 chr17 8705745 8705845 -76732635 - L2 LINE L2 -15 3298 3197 2406 85 3 0 chr17 8706007 8706301 -76732179 - AluSp SINE Alu -12 301 7 986 190 6 0 chr17 8706448 8706622 -76731858 - AluJb SINE Alu -5 307 133 462 261 171 25 chr17 8706622 8706821 -76731659 + MIR SINE MIR 8 235 -27 969 243 78 51 chr17 8707233 8707268 -76731212 - MER20B DNA MER1_type -31 752 719 2394 93 3 0 chr17 8707268 8707578 -76730902 + AluSx SINE Alu 1 311 -1 969 243 78 51 chr17 8707578 8707683 -76730797 - MER20B DNA MER1_type -64 719 618 2184 132 0 7 chr17 8707683 8707993 -76730487 + AluSx SINE Alu 1 308 -4 969 243 78 51 chr17 8707993 8708538 -76729942 - MER20B DNA MER1_type -165 618 2 684 306 40 99 chr17 8709536 8709941 -76728539 - L2 LINE L2 -1 3271 2891 * 800 248 25 95 chr17 8709937 8710211 -76728269 - MIR SINE MIR -1 261 7 2398 167 95 6 chr17 8710311 8710814 -76727666 + MER74A LTR ERVL 1 548 -10 2276 122 0 7 chr17 8710814 8711117 -76727363 - AluSq SINE Alu -12 301 1 1053 202 5 10 chr17 8711303 8711511 -76726969 - AluJo SINE Alu -21 291 85 751 272 25 20 chr17 8711666 8711868 -76726612 - MIR SINE MIR 0 262 60 1972 128 28 14 chr17 8711868 8712156 -76726324 - AluSc SINE Alu -17 292 1 1939 103 72 0 chr17 8712167 8712603 -76725877 - AluSx SINE Alu 0 455 1 1966 198 8 45 chr17 8713446 8713855 -76724625 + Charlie4a DNA MER1_type 39 462 -1499 2234 46 0 4 chr17 8713855 8714116 -76724364 + AluY SINE Alu 1 260 -51 200 35 35 0 chr17 8714116 8714145 -76724335 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 1966 198 8 45 chr17 8714145 8714219 -76724261 + Charlie4a DNA MER1_type 460 505 -3 2348 104 0 3 chr17 8714637 8714946 -76723534 - AluSg SINE Alu -2 308 1 375 319 94 47 chr17 8714980 8715171 -76723309 - L1ME3A LINE L1 -7 6443 6244 363 264 67 1 chr17 8715171 8715390 -76723090 - L1ME3A LINE L1 -728 5716 5482 2556 61 0 3 chr17 8715392 8715702 -76722778 - AluY SINE Alu -2 309 1 2084 106 4 0 chr17 8715741 8716006 -76722474 - AluSp SINE Alu -47 266 1 340 211 16 12 chr17 8716006 8716086 -76722394 - L1ME3A LINE L1 -1086 5340 5259 2854 75 3 24 chr17 8716162 8716534 -76721946 - THE1B LTR MaLR 0 364 1 2660 233 69 37 chr17 8716764 8717216 -76721264 + L1ME1 LINE L1 5325 5816 -350 1879 148 3 20 chr17 8717216 8717520 -76720960 - AluJo SINE Alu -13 299 1 2660 233 69 37 chr17 8717520 8717878 -76720602 + L1ME1 LINE L1 5816 6161 -5 482 243 14 28 chr17 8717874 8718018 -76720462 + L1M4 LINE L1 3483 3624 -2522 * 833 138 0 0 chr17 8718039 8718155 -76720325 - FLAM_C SINE Alu -27 116 1 1174 255 20 3 chr17 8718155 8718508 -76719972 + L1M4 LINE L1 3615 3973 -2173 288 287 33 39 chr17 8718528 8718709 -76719771 - L1ME3A LINE L1 -1142 5284 5105 893 118 141 0 chr17 8718816 8718951 -76719529 - AluJb SINE Alu -22 290 137 4039 191 125 47 chr17 8719078 8720241 -76718239 - L1M4 LINE L1 -5276 1266 14 229 266 133 8 chr17 8720257 8720385 -76718095 - L1ME3A LINE L1 -1553 4873 4730 214 182 30 0 chr17 8720555 8720621 -76717859 + CT-rich Low_complexity Low_complexity 1 68 0 749 0 33 0 chr17 8720627 8720718 -76717762 + (TTTCC)n Simple_repeat Simple_repeat 4 97 0 2144 124 0 0 chr17 8720720 8721002 -76717478 - AluSq SINE Alu -31 282 1 422 306 46 0 chr17 8721002 8721198 -76717282 - L1ME3A LINE L1 -1874 4552 4348 1431 173 73 6 chr17 8721276 8721589 -76716891 - L1MB8 LINE L1 -6 6172 5839 2091 93 11 4 chr17 8721617 8721921 -76716559 + AluSg SINE Alu 1 306 0 1190 283 212 39 chr17 8721949 8722680 -76715800 - L1ME3A LINE L1 -2105 4321 3717 2292 104 7 3 chr17 8722680 8722978 -76715502 - AluSx SINE Alu -13 299 1 1190 283 212 39 chr17 8722978 8723150 -76715330 - L1ME3A LINE L1 -2709 3717 3576 1107 149 0 12 chr17 8723150 8723318 -76715162 - FAM SINE Alu -9 166 1 1190 283 212 39 chr17 8723318 8723621 -76714859 - L1ME3A LINE L1 -2850 3576 3327 1975 145 20 3 chr17 8723621 8723924 -76714556 - AluSx SINE Alu -4 308 1 1190 283 212 39 chr17 8723924 8724262 -76714218 - L1ME3A LINE L1 -3099 3327 2508 2423 87 6 6 chr17 8724269 8724580 -76713900 + AluSx SINE Alu 1 311 -1 460 258 91 67 chr17 8724609 8724886 -76713594 - L1MCa LINE L1 -3948 2478 2227 660 91 0 0 chr17 8724915 8725003 -76713477 + AluSg/x SINE Alu 217 304 -5 658 298 70 66 chr17 8725062 8725502 -76712978 - L1M4 LINE L1 -1218 4928 4487 4123 168 29 50 chr17 8725528 8725798 -76712682 - L1MB8 LINE L1 -1 6177 5903 2340 90 16 19 chr17 8725798 8726109 -76712371 - AluSg SINE Alu 0 310 1 4123 168 29 50 chr17 8726109 8726179 -76712301 - L1MB8 LINE L1 -275 5903 5833 2583 63 0 0 chr17 8726179 8726478 -76712002 - AluY SINE Alu -12 299 1 4123 168 29 50 chr17 8726478 8727192 -76711288 - L1MB8 LINE L1 -345 5833 5155 2237 121 3 13 chr17 8727192 8727506 -76710974 - AluSx SINE Alu -1 311 1 4123 168 29 50 chr17 8727506 8727752 -76710728 - L1MB8 LINE L1 -1023 5155 4905 316 314 131 48 chr17 8727764 8728239 -76710241 - L1M4 LINE L1 -1782 4364 3851 1514 249 77 56 chr17 8728367 8729047 -76709433 + Charlie8 DNA MER1_type 1 694 -1723 313 216 157 147 chr17 8729721 8729810 -76708670 - L1M4 LINE L1 -2326 3820 3733 2211 105 3 3 chr17 8729810 8730142 -76708338 - AluSq SINE Alu 0 332 1 313 216 157 147 chr17 8730142 8730255 -76708225 - L1M4 LINE L1 -2413 3733 3615 1302 187 46 51 chr17 8730290 8730647 -76707833 - L1MD3 LINE L1 0 7995 7638 1245 169 72 41 chr17 8730647 8730937 -76707543 - AluJo SINE Alu -3 309 11 1401 163 71 44 chr17 8730654 8730948 -76707532 - AluJo SINE Alu 0 302 1 1302 187 46 51 chr17 8730948 8731159 -76707321 - L1MD3 LINE L1 -368 7627 7416 2123 110 0 0 chr17 8731159 8731451 -76707029 + AluSx SINE Alu 2 293 -19 1302 187 46 51 chr17 8731451 8731488 -76706992 - L1MD3 LINE L1 -579 7416 7380 1869 146 26 61 chr17 8731488 8731703 -76706777 - MLT1A1 LTR MaLR 0 365 167 2135 98 3 7 chr17 8731703 8731999 -76706481 - AluSc SINE Alu -14 295 1 1869 146 26 61 chr17 8731999 8732161 -76706319 - MLT1A1 LTR MaLR -198 167 1 1302 187 46 51 chr17 8732161 8732209 -76706271 - L1MD3 LINE L1 -615 7380 7333 2230 95 7 0 chr17 8732209 8732503 -76705977 - AluSx SINE Alu -16 296 1 1302 187 46 51 chr17 8732503 8733298 -76705182 - L1MD3 LINE L1 -662 7333 6366 192 40 0 0 chr17 8733341 8733366 -76705114 + (T)n Simple_repeat Simple_repeat 1 25 0 2496 123 31 39 chr17 8733379 8733613 -76704867 - MSTA LTR MaLR 0 428 197 2136 110 0 0 chr17 8733613 8733905 -76704575 - AluSc SINE Alu -17 292 1 2496 123 31 39 chr17 8733905 8734085 -76704395 - MSTA LTR MaLR -231 197 17 1792 172 28 53 chr17 8734093 8734530 -76703950 - L1MC4a LINE L1 -1481 6327 5902 258 244 79 43 chr17 8734546 8734710 -76703770 - L1M4 LINE L1 -2555 3591 3422 316 262 50 64 chr17 8734754 8734895 -76703585 - HAL1 LINE L1 -1202 1305 1167 771 187 0 0 chr17 8735430 8735553 -76702927 + FLAM_C SINE Alu 1 123 -20 414 0 0 0 chr17 8735554 8735600 -76702880 + (TAA)n Simple_repeat Simple_repeat 1 46 0 476 115 90 0 chr17 8735613 8735691 -76702789 + FRAM SINE Alu 46 130 -46 4095 194 29 18 chr17 8735723 8736620 -76701860 - L1ME3 LINE L1 -2 6160 5254 495 267 294 19 chr17 8736641 8737176 -76701304 - L2 LINE L2 -880 2434 1753 215 268 18 0 chr17 8738231 8738287 -76700193 - MIR SINE MIR -110 152 96 2454 49 10 0 chr17 8738638 8738943 -76699537 + AluSc SINE Alu 1 308 -1 261 0 0 0 chr17 8740078 8740107 -76698373 + (TG)n Simple_repeat Simple_repeat 1 29 0 252 272 120 68 chr17 8740561 8740697 -76697783 + MIR SINE MIR 26 188 -74 1794 153 3 3 chr17 8740697 8741000 -76697480 - AluJo SINE Alu 0 303 1 252 272 120 68 chr17 8741000 8741072 -76697408 + MIR SINE MIR 188 255 -7 827 163 0 0 chr17 8741435 8741582 -76696898 + FRAM SINE Alu 29 175 -1 847 180 58 17 chr17 8741960 8742132 -76696348 + FRAM SINE Alu 1 172 -4 681 166 0 126 chr17 8742316 8742515 -76695965 + MER104 DNA MER2_type 4 177 -3 508 224 303 0 chr17 8742855 8743020 -76695460 - MIR SINE MIR -33 229 15 2120 108 0 9 chr17 8743440 8743756 -76694724 - AluSq SINE Alu 0 313 1 293 286 40 16 chr17 8743876 8744002 -76694478 + L2 LINE L2 2925 3053 -219 295 281 7 89 chr17 8744410 8744556 -76693924 + MIR3 SINE MIR 61 194 -14 * 645 326 47 47 chr17 8744555 8744834 -76693646 - L2 LINE L2 0 3272 2994 198 0 0 0 chr17 8745668 8745690 -76692790 + (CA)n Simple_repeat Simple_repeat 1 22 0 2254 99 3 0 chr17 8746052 8746364 -76692116 + AluSp SINE Alu 1 313 0 451 303 50 48 chr17 8746555 8746812 -76691668 - L1M4 LINE L1 -2157 3989 3729 1705 98 117 0 chr17 8746812 8747077 -76691403 - AluSq SINE Alu -13 300 5 451 303 50 48 chr17 8747077 8747198 -76691282 - L1M4 LINE L1 -2417 3729 3610 696 319 99 28 chr17 8747483 8747878 -76690602 + L3 LINE CR1 1042 1464 -113 1689 133 0 22 chr17 8748926 8749196 -76689284 - AluJb SINE Alu -7 305 42 277 224 102 31 chr17 8749752 8749850 -76688630 + L2 LINE L2 3207 3311 -2 2220 106 0 3 chr17 8750152 8750455 -76688025 - AluSq SINE Alu -10 303 2 273 119 0 0 chr17 8751009 8751051 -76687429 + (T)n Simple_repeat Simple_repeat 1 42 0 1665 259 57 136 chr17 8752872 8753315 -76685165 - MLT1J LTR MaLR -38 473 1 2524 141 15 0 chr17 8753429 8753834 -76684646 + L1MB3 LINE L1 5723 6133 -50 5417 126 14 5 chr17 8753855 8754776 -76683704 + L1PA16 LINE L1 5202 6166 0 227 176 0 0 chr17 8754771 8754822 -76683658 + L1MB3 LINE L1 6127 6177 -6 * 484 296 182 76 chr17 8754830 8755202 -76683278 - L3 LINE CR1 -945 632 301 2126 94 52 10 chr17 8755202 8755511 -76682969 - L1PB1 LINE L1 -2 6149 5828 484 296 182 76 chr17 8755511 8755564 -76682916 - L3 LINE CR1 -1276 301 255 203 32 65 0 chr17 8755564 8755595 -76682885 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 484 296 182 76 chr17 8755595 8755684 -76682796 - L3 LINE CR1 -1322 255 62 230 410 37 4 chr17 8755761 8756034 -76682446 + L2 LINE L2 2649 2930 -384 1067 267 81 21 chr17 8756218 8756652 -76681828 - L1ME LINE L1 -427 5743 5284 292 221 26 39 chr17 8756709 8756786 -76681694 + L2 LINE L2 3237 3312 -1 2451 71 0 0 chr17 8757038 8757348 -76681132 - AluY SINE Alu -1 310 1 418 234 184 58 chr17 8758103 8758364 -76680116 - L2 LINE L2 -100 3213 2920 196 300 0 0 chr17 8758559 8758609 -76679871 + L3 LINE CR1 1523 1572 -5 1478 217 33 24 chr17 8758923 8759460 -76679020 - MLT1G LTR MaLR 0 590 7 232 338 0 0 chr17 8760546 8760620 -76677860 - MIR3 SINE MIR -5 203 130 3048 104 15 75 chr17 8760692 8761222 -76677258 + L1PA14 LINE L1 5664 6161 0 2202 97 0 7 chr17 8761311 8761619 -76676861 - AluSg SINE Alu -4 306 1 1747 136 0 79 chr17 8761715 8762045 -76676435 + AluJo SINE Alu 1 304 -8 240 35 0 0 chr17 8762120 8762149 -76676331 + (TG)n Simple_repeat Simple_repeat 1 29 0 2496 52 0 3 chr17 8762204 8762513 -76675967 + AluY SINE Alu 1 308 -3 2180 110 7 0 chr17 8764249 8764559 -76673921 + AluSq SINE Alu 1 312 -1 182 250 50 0 chr17 8764791 8764831 -76673649 - MIR SINE MIR -59 149 108 1932 209 53 9 chr17 8765371 8765820 -76672660 + Charlie4a DNA MER1_type 39 507 -1 336 281 58 16 chr17 8765872 8765993 -76672487 + MIR SINE MIR 28 153 -109 2037 184 13 0 chr17 8766352 8766737 -76671743 + L1MB7 LINE L1 5779 6168 -16 5175 227 42 28 chr17 8766737 8766999 -76671481 + L1M4 LINE L1 3297 3554 -2592 2033 101 0 4 chr17 8766999 8767275 -76671205 + AluSq SINE Alu 1 275 -38 5175 227 42 28 chr17 8767275 8768446 -76670034 + L1M4 LINE L1 3554 4750 -1396 2880 142 39 26 chr17 8768467 8769011 -76669469 + L1MC2 LINE L1 5780 6330 -14 2362 67 0 0 chr17 8769039 8769337 -76669143 - AluY SINE Alu -13 298 1 3593 227 58 61 chr17 8770389 8771651 -76666829 - L1MCa LINE L1 -1343 5197 3940 343 256 67 0 chr17 8771663 8771753 -76666727 - L1MEc LINE L1 -4684 1712 1617 181 233 0 23 chr17 8771773 8771816 -76666664 - L3b LINE CR1 -413 1170 1129 365 210 84 8 chr17 8771817 8771936 -76666544 - L1ME2 LINE L1 -19 6145 6018 1557 252 65 76 chr17 8771938 8772575 -76665905 - L1MEc LINE L1 -4759 1637 1013 2209 103 0 3 chr17 8772575 8772875 -76665605 + AluSx SINE Alu 1 299 -13 1557 252 65 76 chr17 8772875 8773228 -76665252 - L1MEc LINE L1 -5383 1013 658 517 356 18 12 chr17 8773447 8773776 -76664704 - L1MEc LINE L1 -6012 384 54 3481 166 8 13 chr17 8773988 8774625 -76663855 - L1MD1 LINE L1 0 6242 5609 3258 198 41 30 chr17 8774625 8775139 -76663341 - L1MCa LINE L1 -3117 3423 2916 2143 159 0 3 chr17 8775139 8775504 -76662976 - L1PB3 LINE L1 -1 6153 5790 3258 198 41 30 chr17 8775504 8776805 -76661675 - L1MCa LINE L1 -3624 2916 1544 343 155 0 124 chr17 8776849 8776946 -76661534 - L1MCa LINE L1 -4949 1591 1507 1843 178 52 42 chr17 8776993 8777402 -76661078 - MSTB1 LTR MaLR -4 419 17 3493 196 83 11 chr17 8777425 8778171 -76660309 - L1MCa LINE L1 -5712 828 29 24 0 0 0 chr17 8778175 8778199 -76660281 + AT_rich Low_complexity Low_complexity 1 24 0 33 43 0 0 chr17 8778230 8778277 -76660203 + AT_rich Low_complexity Low_complexity 1 47 0 2401 113 8 8 chr17 8778339 8778693 -76659787 + THE1A LTR MaLR 1 354 -1 548 261 234 3 chr17 8778787 8779283 -76659197 + L2 LINE L2 1757 2415 -899 950 73 46 5 chr17 8779540 8780096 -76658384 + (TCTA)n Simple_repeat Simple_repeat 1 578 0 1829 138 3 3 chr17 8780740 8781022 -76657458 + AluJb SINE Alu 11 292 -20 359 100 33 0 chr17 8781022 8781082 -76657398 + G-rich Low_complexity Low_complexity 1 62 0 467 155 0 0 chr17 8781120 8781191 -76657289 + AluJ/FRAM SINE Alu 217 287 -25 381 93 0 0 chr17 8781191 8781245 -76657235 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 609 210 101 0 chr17 8781638 8781776 -76656704 + MIR SINE MIR 111 262 0 259 325 132 10 chr17 8781846 8782043 -76656437 + MIR SINE MIR 34 254 -8 232 97 0 0 chr17 8782774 8782805 -76655675 + THE1-int LTR MaLR 551 581 -999 186 238 0 0 chr17 8782859 8782901 -76655579 + L2 LINE L2 3210 3251 -21 375 182 0 0 chr17 8782904 8782981 -76655499 + CT-rich Low_complexity Low_complexity 2 78 0 1329 182 48 9 chr17 8783015 8783350 -76655130 - L1M4 LINE L1 -830 5316 4969 437 290 158 22 chr17 8783352 8783624 -76654856 - L1M4 LINE L1 -1607 4539 4231 * 497 314 48 74 chr17 8783619 8783968 -76654512 + HAL1b LINE L1 464 821 -3204 2493 93 3 0 chr17 8783968 8784280 -76654200 + AluSq SINE Alu 1 313 0 497 314 48 74 chr17 8784280 8784511 -76653969 + HAL1b LINE L1 821 3483 -542 427 244 15 46 chr17 8784622 8784753 -76653727 + MIR3 SINE MIR 53 179 -29 2317 98 23 0 chr17 8784925 8785230 -76653250 + AluSx SINE Alu 1 312 0 224 122 24 0 chr17 8785237 8785278 -76653202 + GA-rich Low_complexity Low_complexity 2 43 0 6330 193 31 85 chr17 8785812 8787218 -76651262 - L1MC4a LINE L1 -62 7746 6464 2351 121 0 0 chr17 8787218 8787525 -76650955 - AluSx SINE Alu -5 307 1 6330 193 31 85 chr17 8787525 8787985 -76650495 - L1MC4a LINE L1 -1344 6464 5981 23 0 0 0 chr17 8788613 8788636 -76649844 + GC_rich Low_complexity Low_complexity 1 23 0 2144 87 36 4 chr17 8789674 8789951 -76648529 - AluSx SINE Alu -9 303 18 488 190 10 10 chr17 8790079 8790179 -76648301 + MIR SINE MIR 39 138 -124 308 264 22 11 chr17 8790823 8790914 -76647566 + MIR3 SINE MIR 90 181 -27 2247 113 0 16 chr17 8791373 8791684 -76646796 - AluSx SINE Alu -6 306 1 355 346 86 40 chr17 8791811 8792138 -76646342 + L2 LINE L2 2911 3252 -20 607 304 22 6 chr17 8792617 8792798 -76645682 - MIR SINE MIR -72 190 7 561 204 102 7 chr17 8794321 8794468 -76644012 + L2 LINE L2 2896 3056 -257 466 273 61 69 chr17 8794464 8794695 -76643785 + MIR SINE MIR 28 256 -6 * 228 203 14 54 chr17 8794711 8794785 -76643695 - MER69 DNA AcHobo -9 2517 2447 * 628 252 21 7 chr17 8794779 8794922 -76643558 - MER69 DNA AcHobo -1079 147 3 2452 72 3 0 chr17 8795522 8795812 -76642668 + AluSc SINE Alu 1 291 -18 441 0 0 0 chr17 8796535 8796584 -76641896 + (TG)n Simple_repeat Simple_repeat 2 50 0 381 262 74 125 chr17 8797048 8797177 -76641303 + L1ME LINE L1 5339 5473 -648 1929 146 11 4 chr17 8797177 8797457 -76641023 + AluJo SINE Alu 1 282 -30 381 262 74 125 chr17 8797457 8797785 -76640695 + L1ME LINE L1 5473 5770 -351 2241 102 0 33 chr17 8797785 8798089 -76640391 + AluSc SINE Alu 2 295 -14 381 262 74 125 chr17 8798089 8798142 -76640338 + L1ME LINE L1 5770 5824 -297 1421 129 0 0 chr17 8798327 8798513 -76639967 - AluSx SINE Alu -124 188 3 374 330 58 17 chr17 8798593 8798766 -76639714 + L1M4 LINE L1 5120 5299 -847 2217 38 7 7 chr17 8798840 8799129 -76639351 + L1PA8 LINE L1 5884 6172 0 495 338 87 10 chr17 8799596 8799895 -76638585 + MARNA DNA Mariner 90 411 -175 268 298 10 19 chr17 8799919 8800023 -76638457 + MARNA DNA Mariner 331 433 -153 232 217 11 43 chr17 8801091 8801183 -76637297 + L1ME4a LINE L1 3876 3964 -2182 1021 347 71 56 chr17 8801449 8802076 -76636404 + L1ME4a LINE L1 4330 4946 -1200 2317 94 3 28 chr17 8802076 8802395 -76636085 + AluSq SINE Alu 1 311 -2 1021 347 71 56 chr17 8802395 8802671 -76635809 + L1ME4a LINE L1 4946 5252 -894 2374 96 7 0 chr17 8802671 8802974 -76635506 + AluSc SINE Alu 1 305 -4 1021 347 71 56 chr17 8802974 8803055 -76635425 + L1ME4a LINE L1 5252 5330 -816 323 221 49 57 chr17 8803086 8803208 -76635272 + L1ME4a LINE L1 5385 5505 -616 456 284 84 38 chr17 8803227 8803547 -76634933 + L1ME4a LINE L1 5593 5927 -194 798 248 112 61 chr17 8804798 8805173 -76633307 - LTR37B LTR ERV1 -9 459 66 2478 82 0 0 chr17 8805173 8805465 -76633015 - AluSg SINE Alu -18 292 1 475 297 51 11 chr17 8805583 8805758 -76632722 + MIR SINE MIR 6 187 -75 276 228 127 0 chr17 8806420 8806499 -76631981 + MIR SINE MIR 65 153 -109 452 232 45 0 chr17 8806579 8806722 -76631758 - MIR SINE MIR -63 145 42 692 287 52 45 chr17 8807171 8807253 -76631227 - MLT1J LTR MaLR -3 508 428 341 58 19 0 chr17 8807253 8807305 -76631175 + (CA)n Simple_repeat Simple_repeat 2 54 0 692 287 52 45 chr17 8807305 8807490 -76630990 - MLT1J LTR MaLR -83 428 239 248 261 171 9 chr17 8807515 8807626 -76630854 - MLT1J LTR MaLR -382 129 1 373 216 182 57 chr17 8811049 8811225 -76627255 - MIR3 SINE MIR -8 200 3 434 246 49 8 chr17 8811915 8812037 -76626443 - MIR SINE MIR -116 146 20 241 233 33 0 chr17 8812067 8812127 -76626353 + MER112 DNA MER1_type 1 62 -198 297 0 0 0 chr17 8812131 8812164 -76626316 + (CA)n Simple_repeat Simple_repeat 2 34 0 322 287 155 0 chr17 8812167 8812296 -76626184 + MER112 DNA MER1_type 105 253 -7 416 224 140 9 chr17 8812649 8812756 -76625724 - MIR SINE MIR -36 226 106 245 322 83 17 chr17 8813122 8813302 -76625178 + L1MC5 LINE L1 7722 7913 -48 2404 74 0 29 chr17 8813307 8813619 -76624861 + AluY SINE Alu 1 303 -8 181 281 18 79 chr17 8814727 8814841 -76623639 + MIR SINE MIR 19 125 -83 474 279 60 71 chr17 8815289 8815670 -76622810 - MLT1J LTR MaLR -94 417 1 292 261 72 0 chr17 8815671 8815782 -76622698 - MIR SINE MIR -76 186 68 232 341 92 12 chr17 8815797 8815961 -76622519 + MIR3 SINE MIR 9 185 -23 267 79 0 0 chr17 8816384 8816422 -76622058 + (GGA)n Simple_repeat Simple_repeat 2 39 0 2057 115 0 28 chr17 8817150 8817496 -76620984 - AluSx SINE Alu 0 342 5 187 298 88 51 chr17 8820855 8821070 -76617410 - L2 LINE L2 -7 3306 3084 927 307 95 58 chr17 8821141 8821636 -76616844 - L2 LINE L2 -21 3251 2776 2201 118 3 3 chr17 8821636 8821942 -76616538 - AluSg SINE Alu -4 306 1 927 307 95 58 chr17 8821942 8822765 -76615715 - L2 LINE L2 -496 2776 1893 222 236 0 0 chr17 8823446 8823501 -76614979 + (TG)n Simple_repeat Simple_repeat 1 55 0 254 231 0 19 chr17 8824893 8824945 -76613535 + (CACG)n Simple_repeat Simple_repeat 1 51 0 231 317 108 36 chr17 8825104 8825271 -76613209 + MIR SINE MIR 77 255 -7 720 198 198 12 chr17 8827067 8827320 -76611160 + L1MD3 LINE L1 7526 7825 -170 285 29 0 0 chr17 8827329 8827363 -76611117 + (CA)n Simple_repeat Simple_repeat 2 35 0 266 225 59 70 chr17 8827372 8827559 -76610921 + L1MCa LINE L1 1441 1625 -4801 2445 60 0 0 chr17 8827615 8827921 -76610559 + AluY SINE Alu 1 306 0 516 203 23 170 chr17 8827925 8828442 -76610038 + L1MCa LINE L1 2500 2940 -3486 1870 94 0 12 chr17 8828442 8828687 -76609793 - AluSx SINE Alu -68 244 3 4164 35 8 4 chr17 8829608 8830129 -76608351 + LTR6B LTR ERV1 1 523 -35 506 60 5 2 chr17 8830330 8830401 -76608079 + LTR6B LTR ERV1 492 558 0 909 207 57 37 chr17 8831267 8831513 -76606967 - MIR SINE MIR -10 252 2 369 211 38 53 chr17 8832010 8832159 -76606321 - MIR3 SINE MIR -23 185 37 330 169 0 0 chr17 8832180 8832245 -76606235 + (TG)n Simple_repeat Simple_repeat 1 65 0 2284 123 0 0 chr17 8833065 8833375 -76605105 - AluSx SINE Alu -2 310 1 304 226 0 16 chr17 8833650 8833712 -76604768 - MER5A DNA MER1_type -128 61 1 204 376 55 28 chr17 8835662 8835771 -76602709 - L2 LINE L2 -65 3207 3096 526 162 46 104 chr17 8835950 8836123 -76602357 - MLT1K LTR MaLR -9 579 417 605 301 201 32 chr17 8836558 8837116 -76601364 - L2 LINE L2 -413 2901 2250 439 266 59 42 chr17 8837826 8838014 -76600466 - MIR SINE MIR -58 204 18 2090 107 7 17 chr17 8838471 8838770 -76599710 - AluY SINE Alu -15 296 1 516 222 32 16 chr17 8838789 8838915 -76599565 - MIR SINE MIR -45 217 90 2518 69 0 3 chr17 8840189 8840495 -76597985 + AluSc SINE Alu 1 305 -4 1602 224 120 21 chr17 8840554 8840988 -76597492 - LTR40a LTR ERVL -42 477 1 770 218 92 187 chr17 8840988 8841191 -76597289 + L2 LINE L2 2843 3064 -249 2376 59 3 10 chr17 8841191 8841481 -76596999 + AluSc SINE Alu 1 288 -21 770 218 92 187 chr17 8841481 8841497 -76596983 + L2 LINE L2 3064 3080 -233 1564 163 23 10 chr17 8841497 8841798 -76596682 + L1MA7 LINE L1 5987 6291 0 770 218 92 187 chr17 8841798 8842096 -76596384 + L2 LINE L2 3080 3312 -1 506 266 35 35 chr17 8842698 8842841 -76595639 - L2 LINE L2 0 3313 3171 2119 148 16 11 chr17 8842850 8843216 -76595264 - MER44D DNA MER2_type -2 603 364 228 278 0 0 chr17 8843215 8843269 -76595211 + MER44D DNA MER2_type 639 564 -41 * 2088 207 0 0 chr17 8843256 8843633 -76594847 - MER44D DNA MER2_type -328 377 1 2298 85 51 0 chr17 8843813 8844108 -76594372 - AluSg SINE Alu 0 310 1 779 199 47 31 chr17 8844241 8844432 -76594048 - Charlie8 DNA MER1_type -2170 247 54 1832 137 11 85 chr17 8844466 8844568 -76593912 - MER1B DNA MER1_type -2373 337 229 222 62 0 0 chr17 8844568 8844600 -76593880 + (CTGGGG)n Simple_repeat Simple_repeat 3 34 0 1832 137 11 85 chr17 8844600 8844861 -76593619 - MER1B DNA MER1_type -2481 229 1 2542 174 28 58 chr17 8845041 8845577 -76592903 - MLT2B1 LTR ERVL 0 520 1 188 372 23 12 chr17 8845707 8845793 -76592687 + L2 LINE L2 3151 3237 -35 2366 69 16 7 chr17 8846411 8846716 -76591764 + AluSq SINE Alu 1 308 -5 202 208 151 0 chr17 8846972 8847025 -76591455 + L2 LINE L2 3209 3269 -3 1989 106 11 4 chr17 8847096 8847370 -76591110 - AluSq SINE Alu -1 312 37 200 343 15 0 chr17 8847643 8847710 -76590770 + MIR SINE MIR 44 111 -97 * 814 292 101 36 chr17 8847709 8848065 -76590415 - L2 LINE L2 -1 3312 2934 875 187 32 41 chr17 8848336 8848404 -76590076 + L1MD2 LINE L1 6143 6210 -149 2184 126 3 0 chr17 8848404 8848706 -76589774 - AluSq SINE Alu -10 303 1 875 187 32 41 chr17 8848706 8848856 -76589624 + L1MD2 LINE L1 6210 6359 0 2552 293 25 49 chr17 8848877 8849321 -76589159 - L1ME1 LINE L1 -196 5970 5517 892 54 0 0 chr17 8849321 8849432 -76589048 + L1PA7 LINE L1 6044 6154 0 2552 293 25 49 chr17 8849432 8849752 -76588728 - L1ME1 LINE L1 -649 5517 5191 2172 131 3 10 chr17 8849752 8850114 -76588366 - AluSx SINE Alu 0 312 1 2552 293 25 49 chr17 8850114 8850579 -76587901 - L1ME1 LINE L1 -975 5191 4717 1935 114 4 0 chr17 8850579 8850834 -76587646 + AluSg SINE Alu 1 256 -54 2552 293 25 49 chr17 8850834 8851032 -76587448 - L1ME1 LINE L1 -1449 4717 4516 2269 108 0 3 chr17 8851032 8851328 -76587152 - AluSc SINE Alu -14 295 1 2552 293 25 49 chr17 8851328 8851484 -76586996 - L1ME1 LINE L1 -1650 4516 4428 2237 98 0 0 chr17 8851484 8851802 -76586678 - AluY SINE Alu 0 322 5 2552 293 25 49 chr17 8851802 8851855 -76586625 - L1ME1 LINE L1 -1738 4428 4375 607 275 93 55 chr17 8851887 8852256 -76586224 - L1ME LINE L1 -297 5824 5436 2350 95 0 3 chr17 8852256 8852552 -76585928 - AluSg SINE Alu -15 295 1 607 275 93 55 chr17 8852552 8852600 -76585880 - L1ME LINE L1 -685 5436 5391 3746 152 3 23 chr17 8852697 8853360 -76585120 - L1MB4 LINE L1 0 6180 5531 272 114 0 0 chr17 8853432 8853476 -76585004 - L1MB4 LINE L1 -660 5523 5480 221 53 53 0 chr17 8853476 8853514 -76584966 + T-rich Low_complexity Low_complexity 1 40 0 2362 50 4 4 chr17 8853515 8853794 -76584686 - AluY SINE Alu -32 279 1 180 97 0 0 chr17 8853796 8853827 -76584653 + (T)n Simple_repeat Simple_repeat 1 31 0 300 323 43 18 chr17 8853876 8854040 -76584440 - L1ME1 LINE L1 -2456 3690 3523 851 251 21 41 chr17 8854436 8854679 -76583801 + MIR SINE MIR 15 252 -10 2261 105 16 3 chr17 8854682 8854988 -76583492 - AluSq SINE Alu -3 310 1 674 345 26 0 chr17 8855504 8855733 -76582747 - MIR SINE MIR -5 257 23 667 247 6 41 chr17 8855768 8855938 -76582542 - MIR SINE MIR -83 179 16 228 35 0 0 chr17 8856150 8856179 -76582301 + (TCCA)n Simple_repeat Simple_repeat 2 30 0 1598 174 113 10 chr17 8856329 8856640 -76581840 + MER7A DNA MER2_type 1 341 -5 2298 101 0 7 chr17 8857192 8857490 -76580990 - AluSx SINE Alu -16 296 1 243 225 11 90 chr17 8857828 8857917 -76580563 + MIR SINE MIR 131 212 -50 339 257 30 0 chr17 8857931 8858032 -76580448 - MLT1J2 LTR MaLR -4 446 343 607 207 75 27 chr17 8858064 8858252 -76580228 - MLT1J2 LTR MaLR -239 211 15 5442 145 18 35 chr17 8858319 8859046 -76579434 + L1PA16 LINE L1 4427 5165 -1001 2054 138 34 0 chr17 8859046 8859344 -76579136 - AluSx SINE Alu -4 308 1 5442 145 18 35 chr17 8859344 8860382 -76578098 + L1PA16 LINE L1 5165 6160 -6 34 24 0 0 chr17 8860382 8860423 -76578057 + AT_rich Low_complexity Low_complexity 1 41 0 916 273 27 30 chr17 8861103 8861436 -76577044 - MER102b DNA MER1_type 0 341 10 247 143 18 18 chr17 8861676 8861732 -76576748 + GA-rich Low_complexity Low_complexity 4 59 0 304 273 12 31 chr17 8864248 8864409 -76574071 + G-rich Low_complexity Low_complexity 5 162 0 597 136 27 20 chr17 8864434 8864581 -76573899 + GA-rich Low_complexity Low_complexity 1 148 0 372 282 24 40 chr17 8864800 8864924 -76573556 + L2 LINE L2 3146 3267 -5 428 248 41 33 chr17 8865849 8865970 -76572510 - AluJo SINE Alu -70 242 121 375 274 34 8 chr17 8866120 8866237 -76572243 - L1ME LINE L1 -440 5722 5603 2255 111 7 0 chr17 8866314 8866621 -76571859 + AluSp SINE Alu 1 309 -4 1551 164 45 16 chr17 8866736 8867047 -76571433 + L1MA9 LINE L1 5993 6312 0 22 56 0 0 chr17 8868677 8868713 -76569767 + GC_rich Low_complexity Low_complexity 1 36 0 1255 129 0 6 chr17 8870411 8870589 -76567891 - AluSg/x SINE Alu -12 298 122 270 0 0 0 chr17 8870590 8870620 -76567860 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2302 88 3 0 chr17 8870620 8870904 -76567576 - AluSx SINE Alu -27 285 1 275 256 24 80 chr17 8871572 8871697 -76566783 - MARNA DNA Mariner -13 573 456 562 292 73 19 chr17 8871712 8871972 -76566508 + MARNA DNA Mariner 193 466 -120 450 258 78 8 chr17 8872130 8872258 -76566222 + MIR SINE MIR 9 145 -117 2199 110 10 3 chr17 8872261 8872569 -76565911 + AluSx SINE Alu 1 310 -2 23 33 0 0 chr17 8872570 8872600 -76565880 + AT_rich Low_complexity Low_complexity 1 30 0 192 243 0 0 chr17 8873225 8873299 -76565181 + C-rich Low_complexity Low_complexity 1 74 0 265 38 0 57 chr17 8873400 8873453 -76565027 + AluY SINE Alu 251 300 0 1150 292 181 35 chr17 8873487 8873725 -76564755 + L1 LINE L1 4281 4483 -1663 2348 101 13 3 chr17 8873725 8874033 -76564447 + AluSx SINE Alu 1 311 -1 1150 292 181 35 chr17 8874033 8874756 -76563724 + L1 LINE L1 4483 5382 -764 488 277 97 59 chr17 8874876 8875382 -76563098 - L1ME4a LINE L1 -215 5906 5382 435 369 110 19 chr17 8875437 8875800 -76562680 - L1ME4a LINE L1 -865 5281 4886 1913 164 0 19 chr17 8876853 8877171 -76561309 - AluJo SINE Alu 0 312 1 419 305 17 42 chr17 8877887 8878064 -76560416 + MIR SINE MIR 24 196 -62 432 55 0 0 chr17 8878543 8878598 -76559882 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 346 278 152 63 chr17 8878601 8878903 -76559577 - L2 LINE L2 -12 3260 2932 233 234 0 32 chr17 8879658 8879752 -76558728 + G-rich Low_complexity Low_complexity 3 93 0 630 270 98 14 chr17 8879938 8880153 -76558327 + MIR SINE MIR 30 262 0 1291 156 0 62 chr17 8880222 8880383 -76558097 - AluJb SINE Alu -18 294 149 2205 117 0 3 chr17 8880383 8880682 -76557798 - AluSq SINE Alu -15 298 1 1291 156 0 62 chr17 8880682 8880744 -76557736 - AluJb SINE Alu -163 149 85 1027 177 11 11 chr17 8880758 8880939 -76557541 - AluJo SINE Alu -12 300 120 503 331 62 0 chr17 8881029 8881207 -76557273 - MIR SINE MIR -42 220 32 2460 96 0 3 chr17 8881381 8881695 -76556785 + AluSp SINE Alu 1 313 0 501 300 69 55 chr17 8882085 8882575 -76555905 - L2 LINE L2 -386 2928 2432 309 278 220 57 chr17 8883167 8883536 -76554944 - L2 LINE L2 -1816 1498 1078 391 254 0 37 chr17 8883631 8883797 -76554683 - MER3 DNA MER1_type 0 209 5 2411 91 3 10 chr17 8884181 8884490 -76553990 - AluSq SINE Alu -6 307 1 185 0 0 39 chr17 8884494 8884520 -76553960 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2261 124 0 6 chr17 8884836 8885150 -76553330 - AluSx SINE Alu 0 312 1 736 270 42 21 chr17 8885165 8885402 -76553078 - MIR SINE MIR -6 256 15 200 217 22 18 chr17 8885697 8885764 -76552716 + MIR SINE MIR 52 119 -89 442 205 34 17 chr17 8885882 8885999 -76552481 + AluSg/x SINE Alu 169 287 -22 1514 192 136 41 chr17 8886002 8886309 -76552171 + MLT1D LTR MaLR 20 383 -122 2943 171 4 17 chr17 8886309 8886840 -76551640 + MER1A DNA MER1_type 4 527 0 1514 192 136 41 chr17 8886840 8886974 -76551506 + MLT1D LTR MaLR 383 503 -2 293 283 57 9 chr17 8887593 8887699 -76550781 - MIR3 SINE MIR -7 201 91 381 283 26 53 chr17 8888362 8888514 -76549966 - L2 LINE L2 -243 3070 2923 1369 119 0 0 chr17 8888520 8888733 -76549747 - AluSg/x SINE Alu 0 315 103 306 241 65 0 chr17 8888754 8888846 -76549634 + MIR SINE MIR 57 153 -62 2188 113 0 13 chr17 8888979 8889280 -76549200 + AluSx SINE Alu 7 303 -9 21 36 0 0 chr17 8889281 8889309 -76549171 + AT_rich Low_complexity Low_complexity 1 28 0 1565 202 3 37 chr17 8889553 8889875 -76548605 + AluJo SINE Alu 1 311 -1 833 102 34 23 chr17 8889883 8890059 -76548421 + GA-rich Low_complexity Low_complexity 1 178 0 675 157 5 38 chr17 8890082 8890267 -76548213 + GA-rich Low_complexity Low_complexity 2 180 0 1515 167 38 71 chr17 8890404 8890700 -76547780 + L1MB8 LINE L1 5825 6108 -70 2181 101 30 3 chr17 8890700 8890998 -76547482 - AluSq SINE Alu -7 306 1 1515 167 38 71 chr17 8890998 8891066 -76547414 + L1MB8 LINE L1 6108 6177 -1 652 247 23 11 chr17 8891069 8891243 -76547237 - MIR SINE MIR -69 193 18 2157 93 32 39 chr17 8891446 8891758 -76546722 - AluSg SINE Alu 0 310 1 230 333 29 0 chr17 8892804 8892909 -76545571 - MIR3 SINE MIR -25 183 76 189 0 0 0 chr17 8892909 8892930 -76545550 + (TGGG)n Simple_repeat Simple_repeat 2 22 0 2269 96 6 16 chr17 8894438 8894752 -76543728 - AluSx SINE Alu -1 311 1 290 282 11 39 chr17 8895091 8895328 -76543152 + (CGGGG)n Simple_repeat Simple_repeat 1 230 0 212 333 9 9 chr17 8895369 8895474 -76543006 + G-rich Low_complexity Low_complexity 1 105 0 341 305 20 9 chr17 8896091 8896243 -76542237 - MIR SINE MIR -62 146 42 266 326 50 39 chr17 8896590 8896771 -76541709 - L3 LINE CR1 -7 1570 1388 512 241 176 6 chr17 8896998 8897168 -76541312 + MIR SINE MIR 8 206 -56 407 278 87 0 chr17 8897320 8897435 -76541045 + L1ME4a LINE L1 5803 5927 -194 298 267 38 0 chr17 8897439 8897544 -76540936 + L1ME4a LINE L1 5967 6075 -46 2357 78 34 7 chr17 8898104 8898399 -76540081 - AluSx SINE Alu -9 303 1 296 342 76 6 chr17 8898743 8898901 -76539579 - L3 LINE CR1 -310 1267 1099 180 0 0 0 chr17 8899074 8899094 -76539386 + (TA)n Simple_repeat Simple_repeat 2 21 0 2308 77 52 0 chr17 8899094 8899380 -76539100 - AluSx SINE Alu -11 301 1 340 244 122 9 chr17 8899385 8899500 -76538980 - L1ME LINE L1 -315 5806 5679 827 254 21 5 chr17 8899747 8899936 -76538544 + MER82 DNA MER2_type 1 192 -461 2122 97 0 0 chr17 8899939 8900198 -76538282 + AluSg SINE Alu 1 259 -51 327 279 0 0 chr17 8900222 8900301 -76538179 + Charlie4 DNA MER1_type 1880 1958 -3 288 0 0 0 chr17 8900719 8900751 -76537729 + (T)n Simple_repeat Simple_repeat 1 32 0 414 283 68 60 chr17 8900864 8900946 -76537534 + L1ME4a LINE L1 5351 5431 -690 2550 84 0 0 chr17 8900946 8901254 -76537226 - AluSg SINE Alu -2 308 1 414 283 68 60 chr17 8901254 8901422 -76537058 + L1ME4a LINE L1 5431 5603 -518 242 237 13 0 chr17 8901471 8901547 -76536933 + (TA)n Simple_repeat Simple_repeat 2 78 0 448 327 33 19 chr17 8901551 8901765 -76536715 + L1ME4a LINE L1 5610 5826 -295 310 266 90 90 chr17 8901777 8901954 -76536526 + L1ME4a LINE L1 5859 6035 -86 2287 92 6 29 chr17 8901954 8902270 -76536210 - AluSx SINE Alu -3 309 1 1634 211 13 0 chr17 8902305 8902603 -76535877 + AluJb SINE Alu 3 304 -8 594 164 0 9 chr17 8902641 8902769 -76535711 + L1MB3 LINE L1 5665 5786 -385 1957 138 10 10 chr17 8902770 8902904 -76535576 + AluSx SINE Alu 1 134 -178 2576 63 0 0 chr17 8902904 8903203 -76535277 + AluY SINE Alu 1 299 -12 1957 138 10 10 chr17 8903203 8903358 -76535122 + AluSx SINE Alu 133 290 -22 1542 145 0 9 chr17 8903372 8903599 -76534881 + AluSx SINE Alu 1 225 -87 230 27 0 0 chr17 8903602 8903639 -76534841 + Alu SINE Alu 130 166 0 1798 138 75 11 chr17 8903649 8903773 -76534707 + L1MB3 LINE L1 5769 5884 -299 1750 76 5 0 chr17 8903773 8903983 -76534497 + AluSx SINE Alu 2 212 -100 1798 138 75 11 chr17 8903983 8904207 -76534273 + L1MB3 LINE L1 5884 6139 -44 2147 86 10 17 chr17 8904209 8904510 -76533970 + AluSp SINE Alu 1 299 -14 2134 106 0 4 chr17 8905021 8905294 -76533186 - AluSx SINE Alu -40 272 1 1000 265 89 84 chr17 8905301 8905466 -76533014 - L1M4 LINE L1 -3056 3090 2927 1035 149 0 12 chr17 8905466 8905634 -76532846 - FAM SINE Alu -9 166 1 1000 265 89 84 chr17 8905634 8905969 -76532511 - L1M4 LINE L1 -3219 2927 2595 1957 138 23 7 chr17 8905969 8906273 -76532207 - AluSx SINE Alu -3 309 1 1000 265 89 84 chr17 8906273 8906618 -76531862 - L1M4 LINE L1 -3551 2595 2236 2398 93 6 6 chr17 8906618 8906930 -76531550 + AluSx SINE Alu 1 312 0 1000 265 89 84 chr17 8906930 8907037 -76531443 - L1M4 LINE L1 -3910 2236 2131 219 253 11 11 chr17 8907086 8907177 -76531303 + T-rich Low_complexity Low_complexity 6 96 0 620 92 0 0 chr17 8907256 8907343 -76531137 + Alu SINE Alu 220 306 -6 310 349 103 18 chr17 8907402 8907683 -76530797 - L1M4 LINE L1 -1218 4928 4624 223 274 119 0 chr17 8908450 8908534 -76529946 + MIR SINE MIR 56 149 -113 228 184 214 41 chr17 8908765 8908863 -76529617 - MIR3 SINE MIR -23 185 71 195 42 0 0 chr17 8908945 8908969 -76529511 + (CA)n Simple_repeat Simple_repeat 2 25 0 297 305 0 11 chr17 8909002 8909097 -76529383 - MER5A DNA MER1_type -89 100 7 297 308 17 33 chr17 8909935 8910055 -76528425 + L3 LINE CR1 1446 1563 -14 24 53 0 0 chr17 8912097 8912135 -76526345 + AT_rich Low_complexity Low_complexity 1 38 0 2401 91 0 0 chr17 8912706 8913003 -76525477 + AluSq SINE Alu 1 297 -16 739 272 89 4 chr17 8913301 8913536 -76524944 - MIR SINE MIR -4 258 4 2441 81 10 0 chr17 8914789 8915084 -76523396 + AluSp SINE Alu 1 298 -15 1904 168 3 13 chr17 8915112 8915410 -76523070 + AluJb SINE Alu 1 295 -17 272 299 0 0 chr17 8915481 8915548 -76522932 - L2 LINE L2 0 3272 3206 436 171 136 0 chr17 8915568 8915656 -76522824 - FLAM_A SINE Alu -41 101 2 938 209 133 4 chr17 8916222 8916447 -76522033 + MER82 DNA MER2_type 361 614 -39 2412 122 54 33 chr17 8916807 8917232 -76521248 + Tigger2a DNA MER2_type 1 434 0 1399 215 65 63 chr17 8917404 8917529 -76520951 + MLT1C LTR MaLR 6 129 -338 2335 82 3 10 chr17 8917529 8917832 -76520648 + AluSg SINE Alu 1 301 -9 1399 215 65 63 chr17 8917832 8918167 -76520313 + MLT1C LTR MaLR 129 467 0 2290 108 0 10 chr17 8918191 8918488 -76519992 + AluSx SINE Alu 1 294 -18 1170 272 58 21 chr17 8918671 8919337 -76519143 + L1ME3A LINE L1 5174 5862 -308 2376 107 0 0 chr17 8919589 8919899 -76518581 + AluSg SINE Alu 1 310 0 312 241 135 21 chr17 8920536 8920677 -76517803 + LTR67 LTR ERVL 401 557 0 1219 186 5 5 chr17 8920891 8921111 -76517369 - MER58A DNA MER1_type 0 224 5 219 319 165 16 chr17 8921685 8921873 -76516607 + MIR SINE MIR 33 248 -14 195 42 0 0 chr17 8921885 8921909 -76516571 + (ATG)n Simple_repeat Simple_repeat 3 26 0 2254 89 0 4 chr17 8921949 8922230 -76516250 + AluSx SINE Alu 1 280 -32 717 12 0 0 chr17 8922232 8922314 -76516166 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 253 251 14 0 chr17 8922559 8922630 -76515850 + MIR SINE MIR 49 120 -88 531 205 0 27 chr17 8922672 8922784 -76515696 - MER5A DNA MER1_type -80 109 1 2621 44 10 0 chr17 8923450 8923745 -76514735 + AluY SINE Alu 1 298 -13 310 313 188 17 chr17 8923788 8923964 -76514516 + L3 LINE CR1 1020 1225 -352 2544 66 0 16 chr17 8925480 8925784 -76512696 - AluY SINE Alu -12 299 1 838 177 11 0 chr17 8925798 8925979 -76512501 + L1M4 LINE L1 5298 5480 -704 1682 188 22 4 chr17 8925985 8926296 -76512184 + AluJo SINE Alu 1 316 0 2297 75 7 0 chr17 8926296 8926617 -76511863 + AluSx SINE Alu 2 324 0 425 284 39 44 chr17 8926620 8926824 -76511656 + L2 LINE L2 2923 3125 -188 382 273 9 0 chr17 8927124 8927237 -76511243 + MER20B DNA MER1_type 81 197 -22 2548 80 3 0 chr17 8927267 8927579 -76510901 - AluSp SINE Alu 0 313 1 257 255 64 21 chr17 8928525 8928619 -76509861 - MIR SINE MIR -88 174 77 4141 165 57 25 chr17 8929273 8930080 -76508400 + MER21B LTR ERV1 1 833 -30 2277 114 0 3 chr17 8930842 8931149 -76507331 - AluSx SINE Alu -6 306 1 658 295 71 4 chr17 8931520 8931801 -76506679 + L3 LINE CR1 733 1032 -545 2152 130 10 0 chr17 8931884 8932184 -76506296 - AluSx SINE Alu -9 303 1 570 308 120 39 chr17 8932255 8932638 -76505842 + MLT1L LTR MaLR 171 584 -31 248 327 10 0 chr17 8932688 8932789 -76505691 + L3 LINE CR1 1066 1167 -410 988 103 0 0 chr17 8932932 8933058 -76505422 - AluSg/x SINE Alu -48 262 137 2266 86 17 0 chr17 8933432 8933733 -76504747 - AluY SINE Alu -5 306 1 752 287 88 35 chr17 8933891 8934344 -76504136 - MLT1J LTR MaLR -33 478 2 250 236 18 0 chr17 8934404 8934459 -76504021 + MIR SINE MIR 111 166 -96 509 221 30 8 chr17 8934539 8934670 -76503810 - L2 LINE L2 0 3313 3180 773 154 0 29 chr17 8935005 8935141 -76503339 + FLAM_A SINE Alu 1 132 -1 371 295 78 78 chr17 8935157 8935401 -76503079 - L2 LINE L2 -6 3266 3023 395 280 0 24 chr17 8935413 8935538 -76502942 + (CAT)n Simple_repeat Simple_repeat 2 123 0 375 212 15 15 chr17 8935564 8935701 -76502779 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 657 299 29 25 chr17 8935749 8935953 -76502527 - MIR SINE MIR -18 244 40 412 329 68 19 chr17 8936032 8936354 -76502126 - L2 LINE L2 -342 2972 2635 446 276 118 54 chr17 8937669 8937851 -76500629 - MIR SINE MIR -8 254 54 2218 95 7 0 chr17 8937851 8938155 -76500325 - AluSx SINE Alu -6 306 1 446 276 118 54 chr17 8938155 8938193 -76500287 - MIR SINE MIR -208 54 20 2456 68 0 3 chr17 8938268 8938578 -76499902 - AluY SINE Alu -2 309 1 2183 189 55 121 chr17 8938590 8939440 -76499040 - L1MC4a LINE L1 0 7811 7113 286 371 30 8 chr17 8939448 8939580 -76498900 - MER5A DNA MER1_type 0 189 55 2129 120 3 0 chr17 8939588 8939888 -76498592 + AluSx SINE Alu 2 302 -10 9771 95 31 33 chr17 8939888 8940547 -76497933 + Tigger1 DNA MER2_type 951 1610 -808 2237 89 0 3 chr17 8940547 8940850 -76497630 + AluSq SINE Alu 1 302 -11 9771 95 31 33 chr17 8940850 8941657 -76496823 + Tigger1 DNA MER2_type 1610 2414 -4 1716 188 23 53 chr17 8941661 8941727 -76496753 - L1M4 LINE L1 -538 5646 5580 1802 178 3 0 chr17 8941727 8942036 -76496444 - AluJb SINE Alu 0 312 3 1716 188 23 53 chr17 8942036 8942512 -76495968 - L1M4 LINE L1 -604 5580 5122 799 269 20 20 chr17 8942607 8942953 -76495527 - L1M4 LINE L1 -2768 3378 3033 2141 104 0 3 chr17 8944011 8944308 -76494172 + AluSx SINE Alu 5 300 -12 283 295 74 68 chr17 8944332 8944664 -76493816 + L1 LINE L1 2831 3159 -2987 2159 93 3 13 chr17 8944664 8944965 -76493515 + AluSp SINE Alu 2 299 -14 283 295 74 68 chr17 8944965 8945021 -76493459 + L1 LINE L1 3159 3213 -2933 348 273 91 59 chr17 8945021 8945274 -76493206 + MIR SINE MIR 2 262 0 283 295 74 68 chr17 8945274 8945741 -76492739 + L1 LINE L1 3213 3675 -2471 2217 85 7 0 chr17 8945741 8946034 -76492446 - AluSg SINE Alu -15 295 1 873 182 55 12 chr17 8946040 8946205 -76492275 - FAM SINE Alu -3 172 1 283 295 74 68 chr17 8946205 8946259 -76492221 + L1 LINE L1 3679 3755 -2391 862 261 132 17 chr17 8946380 8946530 -76491950 + L1ME3A LINE L1 5777 5908 -262 2460 62 0 0 chr17 8946530 8946837 -76491643 + AluY SINE Alu 3 309 -2 862 261 132 17 chr17 8946837 8947035 -76491445 + L1ME3A LINE L1 5908 6165 -5 2289 109 0 0 chr17 8947051 8947363 -76491117 + AluSx SINE Alu 1 312 0 409 214 11 0 chr17 8947371 8947460 -76491020 + MIR SINE MIR 162 251 -11 300 282 100 18 chr17 8947622 8947732 -76490748 - MIR SINE MIR -133 129 11 2410 71 3 3 chr17 8947828 8948139 -76490341 - AluSp SINE Alu -2 311 1 770 185 0 7 chr17 8948149 8948284 -76490196 - FLAM_C SINE Alu -8 135 2 198 0 0 0 chr17 8948373 8948395 -76490085 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2036 125 7 0 chr17 8948521 8948817 -76489663 + AluSx SINE Alu 1 298 -14 1863 122 15 61 chr17 8949785 8950112 -76488368 - AluSx SINE Alu 0 312 1 350 323 112 31 chr17 8950242 8950403 -76488077 + MER117 DNA MER1_type 1 174 -23 2271 89 13 0 chr17 8951006 8951310 -76487170 - AluSg SINE Alu -2 308 1 2024 106 10 0 chr17 8951766 8952058 -76486422 - AluSc SINE Alu -14 295 1 1212 112 28 6 chr17 8952059 8952238 -76486242 - MSTA LTR MaLR -229 199 17 1039 204 44 54 chr17 8952274 8952568 -76485912 + L1ME3A LINE L1 5827 6117 -53 1452 241 62 63 chr17 8952821 8953783 -76484697 + L1MD3 LINE L1 5338 6001 -1994 3195 181 67 44 chr17 8952894 8953096 -76485384 + L1MB8 LINE L1 5415 5611 -567 2114 114 7 0 chr17 8953096 8953394 -76485086 - AluSx SINE Alu -10 302 3 3195 181 67 44 chr17 8953394 8953938 -76484542 + L1MB8 LINE L1 5611 6178 0 1408 161 11 46 chr17 8954040 8954325 -76484155 + AluJo SINE Alu 33 307 -5 2808 240 77 38 chr17 8954341 8955616 -76482864 + L1ME1 LINE L1 3956 6161 -5 200 277 60 0 chr17 8955872 8955955 -76482525 + (TAAA)n Simple_repeat Simple_repeat 3 90 0 260 320 36 23 chr17 8956006 8956225 -76482255 + L1M4 LINE L1 4795 5016 -1130 516 265 28 22 chr17 8956227 8956408 -76482072 + L1MEd LINE L1 4 185 -5934 294 309 12 0 chr17 8956528 8956612 -76481868 + L1MEd LINE L1 244 328 -5791 203 191 24 0 chr17 8956612 8956654 -76481826 - L2 LINE L2 -5 3308 3266 292 88 35 0 chr17 8956856 8956913 -76481567 + GA-rich Low_complexity Low_complexity 1 59 0 665 277 145 21 chr17 8956916 8957347 -76481133 - L2 LINE L2 -214 3099 2610 744 315 56 45 chr17 8957358 8957872 -76480608 + L1MEd LINE L1 331 850 -5269 713 250 123 4 chr17 8957861 8958097 -76480383 + L1ME3 LINE L1 5859 6122 -40 * 353 154 46 0 chr17 8958434 8958499 -76479981 - MIR SINE MIR -55 153 86 972 150 6 6 chr17 8958570 8958737 -76479743 + FRAM SINE Alu 10 176 0 874 168 0 7 chr17 8958888 8959043 -76479437 + FRAM SINE Alu 1 151 -25 360 57 0 0 chr17 8959050 8959103 -76479377 + L1MB3 LINE L1 6127 6179 -4 2359 94 0 0 chr17 8959835 8960142 -76478338 + AluSc SINE Alu 1 307 -2 2229 84 0 7 chr17 8960878 8961177 -76477303 - AluSx SINE Alu -15 297 1 239 258 0 32 chr17 8961611 8961673 -76476807 + MIR SINE MIR 182 241 -21 1419 110 10 5 chr17 8962749 8962958 -76475522 - AluSg/x SINE Alu -18 292 83 183 42 0 0 chr17 8963202 8963226 -76475254 + (TATAA)n Simple_repeat Simple_repeat 4 27 0 246 156 0 0 chr17 8963333 8963378 -76475102 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 525 309 49 10 chr17 8963389 8963593 -76474887 + MIR SINE MIR 8 219 -43 197 244 0 0 chr17 8963656 8963701 -76474779 - L2 LINE L2 -15 3257 3213 219 229 0 21 chr17 8965892 8965940 -76472540 + GA-rich Low_complexity Low_complexity 4 50 0 21 36 0 0 chr17 8967439 8967467 -76471013 + GC_rich Low_complexity Low_complexity 1 28 0 3212 124 15 35 chr17 8969460 8969729 -76468751 - L1MB3 LINE L1 -8 6175 5902 2065 117 0 10 chr17 8969729 8970037 -76468443 - AluSx SINE Alu -7 305 1 3212 124 15 35 chr17 8970037 8970160 -76468320 - L1MB3 LINE L1 -281 5902 5778 2674 82 36 6 chr17 8970160 8970524 -76467956 - THE1C LTR MaLR 0 375 1 3212 124 15 35 chr17 8970524 8970677 -76467803 - L1MB3 LINE L1 -405 5778 5640 2464 221 90 37 chr17 8970687 8971277 -76467203 - L1ME3A LINE L1 0 6170 5530 2585 92 19 29 chr17 8971277 8971656 -76466824 + THE1C LTR MaLR 1 375 0 2464 221 90 37 chr17 8971656 8971822 -76466658 - L1ME3A LINE L1 -640 5530 5374 1501 140 49 18 chr17 8971835 8972120 -76466360 - AluJo SINE Alu -18 294 1 206 355 57 87 chr17 8972580 8972946 -76465534 - L2 LINE L2 -1 3271 2917 2005 109 0 20 chr17 8973239 8973543 -76464937 + AluSc SINE Alu 1 298 -11 314 193 28 92 chr17 8973613 8973722 -76464758 - L1MCa LINE L1 -4361 2065 1964 823 146 0 29 chr17 8973726 8973863 -76464617 + FLAM_C SINE Alu 1 133 0 310 245 128 20 chr17 8973879 8973981 -76464499 + HAL1b LINE L1 1232 1344 -4 238 227 91 18 chr17 8974159 8974269 -76464211 + L1ME4a LINE L1 5599 5716 -405 242 154 0 15 chr17 8974272 8974337 -76464143 + GA-rich Low_complexity Low_complexity 4 67 0 430 291 67 32 chr17 8974337 8974421 -76464059 + L1ME4a LINE L1 5724 5804 -317 2044 91 10 14 chr17 8974421 8974718 -76463762 - AluSq SINE Alu -17 296 1 430 291 67 32 chr17 8974718 8974977 -76463503 + L1ME4a LINE L1 5804 6079 -42 2087 121 7 7 chr17 8976188 8976494 -76461986 - AluSg SINE Alu -2 308 3 255 312 64 29 chr17 8976994 8977167 -76461313 + L1 LINE L1 4045 4223 -1923 2439 68 0 3 chr17 8977168 8977478 -76461002 + AluY SINE Alu 1 309 -2 1595 117 73 4 chr17 8978329 8978576 -76459904 - AluSx SINE Alu -15 297 34 2117 104 7 3 chr17 8978596 8978894 -76459586 - AluSx SINE Alu -13 299 1 2216 92 0 3 chr17 8978971 8979265 -76459215 - AluSg SINE Alu -17 293 1 839 182 0 0 chr17 8979338 8979470 -76459010 - FLAM_A SINE Alu 0 133 2 21 0 0 0 chr17 8979753 8979774 -76458706 + AT_rich Low_complexity Low_complexity 1 21 0 400 315 122 20 chr17 8979909 8980204 -76458276 - L2 LINE L2 -1 3312 2988 2068 120 0 0 chr17 8980375 8980667 -76457813 + AluSx SINE Alu 1 292 -20 900 161 62 0 chr17 8980676 8980837 -76457643 + AluJb SINE Alu 121 291 -21 239 336 182 21 chr17 8980839 8981372 -76457108 - L2 LINE L2 -618 2696 2078 200 170 19 0 chr17 8981372 8981425 -76457055 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 2164 53 11 7 chr17 8981773 8982056 -76456424 + AluY SINE Alu 12 295 -16 2192 88 7 3 chr17 8982212 8982507 -76455973 + AluSq SINE Alu 1 296 -17 21 0 0 0 chr17 8982711 8982732 -76455748 + AT_rich Low_complexity Low_complexity 1 21 0 2042 118 0 3 chr17 8983607 8983941 -76454539 + AluSg SINE Alu 1 310 0 610 192 245 0 chr17 8983966 8984117 -76454363 + MER5A DNA MER1_type 1 188 -1 2469 82 0 0 chr17 8984618 8984912 -76453568 - AluSc SINE Alu -13 296 3 2737 154 2 7 chr17 8985084 8985520 -76452960 - Tigger2a DNA MER2_type 0 434 1 3093 161 31 27 chr17 8985776 8986361 -76452119 - L1MB5 LINE L1 0 6174 5588 1034 242 8 4 chr17 8986506 8986746 -76451734 - MIR SINE MIR -16 246 6 306 73 0 0 chr17 8986925 8986966 -76451514 + (T)n Simple_repeat Simple_repeat 1 41 0 270 205 156 74 chr17 8986966 8987088 -76451392 - MIR SINE MIR -14 248 117 585 103 41 0 chr17 8987313 8987410 -76451070 + L1PB3 LINE L1 6053 6153 -1 2025 136 0 7 chr17 8987420 8987722 -76450758 + AluSx SINE Alu 1 300 -12 2204 101 10 0 chr17 8989253 8989541 -76448939 + AluSq SINE Alu 4 294 -19 1395 163 6 131 chr17 8989544 8989888 -76448592 + AluJb SINE Alu 2 302 0 523 289 41 5 chr17 8989929 8990147 -76448333 + L2 LINE L2 2843 3068 -245 322 165 12 12 chr17 8990346 8990431 -76448049 + (TGAA)n Simple_repeat Simple_repeat 1 85 0 258 339 59 0 chr17 8991923 8992041 -76446439 - L2 LINE L2 -4 3268 3144 1388 159 14 0 chr17 8992334 8992548 -76445932 - MER58A DNA MER1_type -1 223 7 3044 223 26 41 chr17 8992676 8992811 -76445669 - MSTD-int LTR MaLR -1013 722 586 743 126 0 0 chr17 8992811 8992914 -76445566 - U6 snRNA snRNA -2 105 3 3044 223 26 41 chr17 8992914 8993510 -76444970 - MSTD-int LTR MaLR -1149 586 2 739 179 30 65 chr17 8993513 8993681 -76444799 - MSTD LTR MaLR -1 395 234 401 227 21 0 chr17 8994912 8995009 -76443471 - AluSg SINE Alu -210 100 2 1758 153 0 53 chr17 8995070 8995390 -76443090 - AluSx SINE Alu -9 303 1 1485 176 66 4 chr17 8995542 8995815 -76442665 - Tigger3(Golem) DNA MER2_type -11 3018 2729 2110 121 0 0 chr17 8995815 8996095 -76442385 + AluSg SINE Alu 1 280 -30 225 287 46 0 chr17 8996325 8996412 -76442068 - Tigger5 DNA MER2_type -5 2318 2228 1714 155 76 10 chr17 8996512 8996815 -76441665 + MER31A LTR ERV1 158 480 -5 2307 112 0 0 chr17 8997884 8998187 -76440293 + AluSx SINE Alu 1 303 -9 479 241 102 89 chr17 8999008 8999402 -76439078 - HAL1 LINE L1 -740 1767 1369 445 262 22 142 chr17 8999391 8999568 -76438912 - HAL1 LINE L1 -1431 1076 964 * 1430 74 5 0 chr17 8999568 8999757 -76438723 + L1PA6 LINE L1 5960 6149 -5 445 262 22 142 chr17 8999757 8999946 -76438534 - HAL1 LINE L1 -1543 964 754 186 43 0 0 chr17 9000097 9000120 -76438360 + (T)n Simple_repeat Simple_repeat 1 23 0 1785 148 50 7 chr17 9000403 9000680 -76437800 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9000683 9000998 -76437482 + AluSg SINE Alu 1 309 -1 1267 120 0 11 chr17 9001469 9001652 -76436828 + AluSg/x SINE Alu 112 292 -18 455 295 76 9 chr17 9001672 9001896 -76436584 - MIR SINE MIR -1 261 23 23 0 0 0 chr17 9003252 9003275 -76435205 + AT_rich Low_complexity Low_complexity 1 23 0 1970 98 0 0 chr17 9003434 9003689 -76434791 + AluSc SINE Alu 41 295 -14 235 133 17 17 chr17 9003693 9003753 -76434727 + A-rich Low_complexity Low_complexity 1 60 0 1973 232 87 33 chr17 9003753 9004306 -76434174 + MER72 LTR ERV1 83 673 -49 2054 120 3 20 chr17 9004306 9004607 -76433873 + AluSx SINE Alu 5 300 -12 1973 232 87 33 chr17 9004607 9004660 -76433820 + MER72 LTR ERV1 673 722 0 665 236 28 0 chr17 9004780 9004924 -76433556 + MER21B LTR ERV1 5 152 -711 1023 108 0 0 chr17 9005033 9005163 -76433317 - AluSg SINE Alu -179 131 2 234 0 0 0 chr17 9006161 9006187 -76432293 + (A)n Simple_repeat Simple_repeat 1 26 0 2911 213 83 8 chr17 9007467 9008102 -76430378 + MER21B LTR ERV1 121 803 -60 2137 104 37 0 chr17 9008631 9008928 -76429552 + AluY SINE Alu 1 308 -3 953 155 19 25 chr17 9009331 9009492 -76428988 - FRAM SINE Alu -5 161 2 1369 196 29 29 chr17 9010018 9010329 -76428151 + AluJb SINE Alu 1 311 -1 307 235 61 10 chr17 9010346 9010444 -76428036 + AluSp SINE Alu 3 105 -198 244 53 0 0 chr17 9010544 9010582 -76427898 + Alu SINE Alu 265 302 0 2440 81 16 0 chr17 9010929 9011237 -76427243 + AluSq SINE Alu 1 313 0 2341 167 16 11 chr17 9011354 9011731 -76426749 + MER44D DNA MER2_type 1 379 -326 1136 153 0 26 chr17 9011740 9011930 -76426550 + AluJo SINE Alu 17 201 -111 1022 118 53 21 chr17 9011932 9012010 -76426470 + Tigger7 DNA MER2_type 2178 2252 -235 198 0 0 0 chr17 9012010 9012032 -76426448 + (GA)n Simple_repeat Simple_repeat 1 22 0 1022 118 53 21 chr17 9012032 9012140 -76426340 + Tigger7 DNA MER2_type 2252 2370 -117 2316 97 0 7 chr17 9012140 9012448 -76426032 + AluSq SINE Alu 1 306 -7 1571 138 12 0 chr17 9012623 9012870 -76425610 + LTR48B LTR ERV1 7 256 -388 2477 73 0 3 chr17 9012871 9013173 -76425307 + AluY SINE Alu 3 303 -8 1993 82 0 0 chr17 9013395 9013639 -76424841 + AluSq SINE Alu 62 305 -8 1168 184 58 51 chr17 9014304 9014598 -76423882 - AluJo SINE Alu -11 301 6 228 133 0 0 chr17 9014944 9015009 -76423471 - Alu SINE Alu 0 318 254 681 199 164 59 chr17 9015172 9015428 -76423052 - MER102a DNA MER1_type -14 316 34 230 217 43 0 chr17 9015507 9015576 -76422904 + CT-rich Low_complexity Low_complexity 3 74 0 2294 84 0 14 chr17 9015733 9016029 -76422451 + AluSq SINE Alu 1 292 -21 191 225 0 0 chr17 9017402 9017442 -76421038 + MIR3 SINE MIR 154 193 -15 2112 82 0 38 chr17 9017701 9018031 -76420449 - AluY SINE Alu 0 319 1 2014 128 21 0 chr17 9018229 9018519 -76419961 - AluSx SINE Alu -16 296 1 23 33 0 0 chr17 9018935 9018965 -76419515 + AT_rich Low_complexity Low_complexity 1 30 0 28 48 0 0 chr17 9019887 9019929 -76418551 + AT_rich Low_complexity Low_complexity 1 42 0 2230 84 0 7 chr17 9020042 9020340 -76418140 + AluSx SINE Alu 11 306 -6 1509 121 117 16 chr17 9020603 9020882 -76417598 + AluSx SINE Alu 1 305 0 3029 179 10 62 chr17 9021509 9021685 -76416795 + L1MC3 LINE L1 5892 6076 -1709 2172 61 6 98 chr17 9021685 9022012 -76416468 + AluSq SINE Alu 1 297 -16 3029 179 10 62 chr17 9022012 9022399 -76416081 + L1MC3 LINE L1 6076 6417 -1368 2357 86 0 3 chr17 9022399 9022703 -76415777 + AluSg SINE Alu 1 303 -7 3029 179 10 62 chr17 9022703 9022818 -76415662 + L1MC3 LINE L1 6417 6536 -1249 907 144 77 62 chr17 9022818 9022977 -76415503 + L1MC3 LINE L1 6857 7021 -764 1988 124 12 50 chr17 9022977 9023299 -76415181 + AluSx SINE Alu 1 310 -2 907 144 77 62 chr17 9023299 9023347 -76415133 + L1MC3 LINE L1 7021 7067 -718 230 301 24 24 chr17 9023362 9023445 -76415035 + MLT1F1 LTR MaLR 36 118 -449 2732 184 59 9 chr17 9023445 9024006 -76414474 + L1MC3 LINE L1 7184 7772 -13 461 216 26 92 chr17 9024005 9024050 -76414430 + L1M4 LINE L1 4718 4764 -1382 * 1913 154 3 3 chr17 9024050 9024349 -76414131 + AluSx SINE Alu 1 299 -13 461 216 26 92 chr17 9024349 9024456 -76414024 + L1M4 LINE L1 4764 4860 -1286 229 306 0 0 chr17 9024656 9024746 -76413734 - MIR SINE MIR -85 123 33 2481 97 0 0 chr17 9024867 9025177 -76413303 + AluSx SINE Alu 1 310 -2 813 210 0 3 chr17 9025389 9025704 -76412776 + (TGGA)n Simple_repeat Simple_repeat 1 313 0 210 147 0 0 chr17 9025719 9025753 -76412727 + (CATA)n Simple_repeat Simple_repeat 2 35 0 217 353 0 47 chr17 9026503 9026588 -76411892 + L2 LINE L2 3157 3237 -35 2447 81 3 0 chr17 9027018 9027315 -76411165 + AluSp SINE Alu 1 298 -15 537 198 0 0 chr17 9027350 9027451 -76411029 - L1MD3 LINE L1 -15 7980 7880 247 183 76 53 chr17 9027640 9027771 -76410709 - Charlie7 DNA MER1_type 0 2612 2479 282 254 0 0 chr17 9027800 9027859 -76410621 - Charlie7 DNA MER1_type -2518 94 36 216 365 0 0 chr17 9028618 9028681 -76409799 + L2 LINE L2 3210 3272 0 794 221 113 63 chr17 9029207 9029222 -76409258 + HAL1 LINE L1 1121 1134 -1373 1825 150 6 42 chr17 9029222 9029366 -76409114 + AluJo SINE Alu 1 149 -163 2567 52 0 23 chr17 9029366 9029673 -76408807 + AluSg SINE Alu 1 300 -10 1825 150 6 42 chr17 9029673 9029841 -76408639 + AluJo SINE Alu 149 302 -10 794 221 113 63 chr17 9029841 9030205 -76408275 + HAL1 LINE L1 1134 1519 -988 829 247 116 86 chr17 9030241 9030554 -76407926 + HAL1 LINE L1 1728 2030 -477 2355 100 0 0 chr17 9030554 9030855 -76407625 + AluSg SINE Alu 1 301 -9 829 247 116 86 chr17 9030855 9031293 -76407187 + HAL1 LINE L1 2030 2501 -6 2500 247 87 61 chr17 9031474 9031991 -76406489 + L1MC4 LINE L1 6349 6851 -957 1692 137 14 41 chr17 9031991 9032283 -76406197 + AluJo SINE Alu 17 300 -12 2500 247 87 61 chr17 9032283 9032412 -76406068 + L1MC4 LINE L1 6851 6975 -833 1899 34 24 119 chr17 9032412 9032707 -76405773 + AluYb8 SINE Alu 41 307 -11 2500 247 87 61 chr17 9032707 9032992 -76405488 + L1MC4 LINE L1 6975 7251 -557 1818 154 3 10 chr17 9032992 9033285 -76405195 - AluJb SINE Alu 0 312 22 2500 247 87 61 chr17 9033285 9033706 -76404774 + L1MC4 LINE L1 7251 7675 -133 2032 117 10 7 chr17 9033716 9034014 -76404466 + AluSx SINE Alu 1 299 -13 198 0 0 0 chr17 9034350 9034372 -76404108 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 571 285 44 33 chr17 9034484 9034754 -76403726 - L1ME1 LINE L1 -18 6148 5876 * 3450 209 119 36 chr17 9034730 9035834 -76402646 - L1MDb LINE L1 -4110 2296 1072 1614 192 4 0 chr17 9035834 9036110 -76402370 - AluJo SINE Alu -2 310 34 3450 209 119 36 chr17 9036110 9036436 -76402044 - L1MDb LINE L1 -5334 1072 775 298 225 51 87 chr17 9036805 9036943 -76401537 - L1MC4 LINE L1 0 8042 7910 26 0 0 0 chr17 9036984 9037010 -76401470 + AT_rich Low_complexity Low_complexity 1 26 0 2020 135 7 3 chr17 9037010 9037298 -76401182 - AluSx SINE Alu -23 289 1 378 288 66 47 chr17 9037397 9037609 -76400871 - L1MC4 LINE L1 -232 7810 7595 2437 65 0 36 chr17 9037610 9037918 -76400562 - AluSg SINE Alu -8 302 6 2275 109 0 0 chr17 9037933 9038227 -76400253 - AluSq SINE Alu -17 296 3 2358 101 0 0 chr17 9039639 9039945 -76398535 - AluSp SINE Alu -4 309 4 1567 174 6 59 chr17 9041326 9041419 -76397061 + AluJo SINE Alu 1 97 -215 2256 123 3 0 chr17 9041419 9041729 -76396751 + AluSq SINE Alu 1 311 -2 1567 174 6 59 chr17 9041729 9041957 -76396523 + AluJo SINE Alu 97 305 -7 2344 58 4 0 chr17 9043410 9043713 -76394767 - AluY SINE Alu 0 305 2 1134 182 81 8 chr17 9043826 9044062 -76394418 - MER33 DNA MER1_type -69 255 3 373 174 12 23 chr17 9044294 9044380 -76394100 - L1MB8 LINE L1 -1 6177 6093 432 117 62 0 chr17 9044449 9044594 -76393886 + (TA)n Simple_repeat Simple_repeat 1 154 0 2124 125 3 7 chr17 9044594 9044898 -76393582 + AluSq SINE Alu 1 303 -10 255 286 47 22 chr17 9044966 9045151 -76393329 - Charlie8 DNA MER1_type -2204 213 5 2302 99 0 0 chr17 9045495 9045787 -76392693 + AluSx SINE Alu 11 302 -10 2352 89 10 3 chr17 9047002 9047305 -76391175 - AluSg SINE Alu -5 305 1 2364 107 15 12 chr17 9047722 9048060 -76390420 + MER1B DNA MER1_type 1 339 0 2448 80 3 0 chr17 9048309 9048611 -76389869 + AluSx SINE Alu 1 303 -9 515 234 124 0 chr17 9048790 9048927 -76389553 - Charlie8 DNA MER1_type -2167 250 97 44 40 0 13 chr17 9048979 9049016 -76389464 + AT_rich Low_complexity Low_complexity 1 37 -38 188 35 35 0 chr17 9049016 9049045 -76389435 + (TA)n Simple_repeat Simple_repeat 1 30 0 44 40 0 13 chr17 9049045 9049083 -76389397 + AT_rich Low_complexity Low_complexity 37 75 0 2455 81 3 0 chr17 9049089 9049396 -76389084 + AluSp SINE Alu 1 308 -5 2204 91 0 27 chr17 9050375 9050673 -76387807 - AluY SINE Alu -21 290 1 349 279 48 30 chr17 9050941 9050954 -76387526 - MER5A DNA MER1_type -18 160 149 2460 72 0 0 chr17 9050954 9051245 -76387235 - AluY SINE Alu -9 302 12 349 279 48 30 chr17 9051245 9051398 -76387082 - MER5A DNA MER1_type -29 149 7 220 262 0 127 chr17 9051652 9051694 -76386786 + L2 LINE L2 2712 2758 -556 2428 92 0 0 chr17 9051694 9051997 -76386483 + AluSq SINE Alu 3 305 -8 220 262 0 127 chr17 9051997 9052080 -76386400 + L2 LINE L2 2758 2821 -493 2132 108 42 0 chr17 9052379 9052665 -76385815 + AluSx SINE Alu 1 298 -14 1743 157 3 7 chr17 9053312 9053606 -76384874 + AluSg SINE Alu 1 293 -17 228 151 14 55 chr17 9053618 9053691 -76384789 + GA-rich Low_complexity Low_complexity 3 72 0 264 111 0 0 chr17 9054188 9054233 -76384247 + (TG)n Simple_repeat Simple_repeat 1 45 0 301 216 169 14 chr17 9054355 9054503 -76383977 - L1ME4a LINE L1 -2 6119 5949 668 220 32 0 chr17 9054516 9054670 -76383810 + MSTD LTR MaLR 1 159 -237 3178 126 71 15 chr17 9054683 9055201 -76383279 - LTR10A LTR ERV1 -62 547 1 686 176 124 36 chr17 9055202 9055395 -76383085 + MSTD LTR MaLR 176 385 -11 4090 139 21 44 chr17 9055488 9056194 -76382286 + LTR8 LTR ERV1 2 691 0 2465 61 0 7 chr17 9056358 9056654 -76381826 + AluY SINE Alu 1 294 -17 1793 140 13 2 chr17 9056658 9056935 -76381545 + L1PA16 LINE L1 5867 6145 -21 251 177 190 25 chr17 9057181 9057260 -76381220 - L2 LINE L2 -39 3233 3142 21 0 0 0 chr17 9058771 9058792 -76379688 + AT_rich Low_complexity Low_complexity 1 21 0 1900 100 0 16 chr17 9060351 9060601 -76377879 + AluSc SINE Alu 1 246 -63 21 0 0 0 chr17 9060601 9060622 -76377858 + AT_rich Low_complexity Low_complexity 1 21 0 213 355 97 27 chr17 9060789 9060975 -76377505 + L3 LINE CR1 984 1182 -395 1334 164 35 87 chr17 9061015 9061191 -76377289 + MER58B DNA MER1_type 46 201 -2219 2278 70 3 67 chr17 9061191 9061522 -76376958 - AluY SINE Alu -1 310 1 1334 164 35 87 chr17 9061522 9061657 -76376823 + MER58B DNA MER1_type 201 341 0 478 237 164 13 chr17 9061667 9061819 -76376661 - MER5A DNA MER1_type -2 187 13 2260 88 17 7 chr17 9061909 9062204 -76376276 - AluSg SINE Alu -11 299 2 1818 80 0 36 chr17 9063807 9064057 -76374423 - AluY SINE Alu -15 296 56 373 196 107 0 chr17 9064271 9064383 -76374097 - L1MA8 LINE L1 -3 6288 6165 283 348 63 6 chr17 9064878 9065036 -76373444 + L2 LINE L2 2261 2427 -887 1243 213 115 37 chr17 9065126 9065539 -76372941 + MER66A LTR ERV1 100 448 -30 279 375 46 32 chr17 9065560 9065840 -76372640 + L2 LINE L2 2491 2774 -540 2272 86 0 7 chr17 9065866 9066157 -76372323 + AluSc SINE Alu 1 289 -20 226 313 12 12 chr17 9066327 9066410 -76372070 + L2 LINE L2 3017 3099 -173 454 179 12 0 chr17 9066546 9066630 -76371850 - L1MA10 LINE L1 -32 6302 6218 268 290 110 21 chr17 9066812 9066957 -76371523 - MIR SINE MIR -81 181 24 1068 62 8 0 chr17 9068574 9068704 -76369776 + AluSc SINE Alu 1 131 -178 230 73 24 0 chr17 9068704 9068745 -76369735 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1052 65 0 0 chr17 9068800 9068923 -76369557 + AluSc SINE Alu 1 123 -186 1010 89 0 0 chr17 9069013 9069136 -76369344 + AluSc SINE Alu 1 123 -186 2474 77 0 0 chr17 9069220 9069519 -76368961 + AluY SINE Alu 1 299 -12 1687 182 26 6 chr17 9069532 9069873 -76368607 + L1MB4 LINE L1 5738 6085 -95 1082 269 4 4 chr17 9070018 9070263 -76368217 - AluSq SINE Alu -68 245 1 2331 82 7 0 chr17 9070665 9070958 -76367522 + AluY SINE Alu 4 298 -13 254 275 38 69 chr17 9071299 9071400 -76367080 + MER5B DNA MER1_type 4 102 -76 2247 182 72 115 chr17 9071400 9071547 -76366933 + LTR8A LTR ERV1 1 153 -574 2381 92 0 0 chr17 9071547 9071839 -76366641 - AluSg1 SINE Alu -17 292 1 2247 182 72 115 chr17 9071839 9072450 -76366030 + LTR8A LTR ERV1 153 727 0 254 275 38 69 chr17 9072450 9072479 -76366001 + MER5B DNA MER1_type 102 130 -48 436 183 11 11 chr17 9072525 9072618 -76365862 - MER5B DNA MER1_type -6 172 80 479 221 11 0 chr17 9072618 9072713 -76365767 + MER21B LTR ERV1 1 96 -767 1922 259 77 37 chr17 9072766 9073438 -76365042 + MER21B LTR ERV1 98 796 -67 339 220 22 77 chr17 9073451 9073542 -76364938 - MER5B DNA MER1_type -89 89 4 210 37 0 0 chr17 9073687 9073714 -76364766 + (A)n Simple_repeat Simple_repeat 1 27 0 2405 65 10 0 chr17 9073717 9074008 -76364472 + AluY SINE Alu 1 294 -17 1639 170 13 32 chr17 9074081 9074393 -76364087 - AluJb SINE Alu -4 308 3 651 137 0 73 chr17 9074414 9074538 -76363942 - FLAM_A SINE Alu -18 124 10 251 335 49 27 chr17 9075782 9075967 -76362513 + L2 LINE L2 1755 1943 -1371 182 200 0 0 chr17 9076171 9076206 -76362274 + L2 LINE L2 2607 2641 -673 195 39 0 0 chr17 9076271 9076279 -76362201 + (T)n Simple_repeat Simple_repeat 1 8 -18 2433 76 3 0 chr17 9076279 9076581 -76361899 + AluSp SINE Alu 1 303 -10 195 39 0 0 chr17 9076581 9076598 -76361882 + (T)n Simple_repeat Simple_repeat 7 26 0 264 252 0 107 chr17 9076610 9076713 -76361767 + MER58A DNA MER1_type 27 118 0 2269 157 8 17 chr17 9076754 9076927 -76361553 - L1MB5 LINE L1 -8 6166 5993 1860 131 138 60 chr17 9076927 9077274 -76361206 + MSTA LTR MaLR 1 384 -44 2386 93 0 7 chr17 9077274 9077575 -76360905 - AluSq SINE Alu -14 299 1 1860 131 138 60 chr17 9077575 9077624 -76360856 + MSTA LTR MaLR 384 428 0 2269 157 8 17 chr17 9077624 9077852 -76360628 - L1MB5 LINE L1 -181 5993 5769 467 259 36 0 chr17 9077860 9077972 -76360508 + MER58A DNA MER1_type 108 223 -1 488 306 55 12 chr17 9078029 9078284 -76360196 + L1MC4a LINE L1 5697 5962 -1846 2216 112 0 7 chr17 9078488 9078792 -76359688 - AluSg SINE Alu -8 302 1 2227 116 7 0 chr17 9081168 9081461 -76357019 + AluSg SINE Alu 1 295 -15 2898 211 51 27 chr17 9081466 9082097 -76356383 - MER82 DNA MER2_type -6 647 2 22 0 0 0 chr17 9082192 9082214 -76356266 + AT_rich Low_complexity Low_complexity 1 22 0 2453 236 51 36 chr17 9082248 9082551 -76355929 + L1ME1 LINE L1 5467 5764 -402 2368 75 0 3 chr17 9082551 9082857 -76355623 + AluY SINE Alu 2 306 -5 2453 236 51 36 chr17 9082857 9083108 -76355372 + L1ME1 LINE L1 5764 6035 -131 766 139 0 36 chr17 9083108 9083245 -76355235 + FLAM_A SINE Alu 1 132 -1 2453 236 51 36 chr17 9083245 9083358 -76355122 + L1ME1 LINE L1 6035 6145 -21 2297 94 10 0 chr17 9083359 9083647 -76354833 - AluSx SINE Alu -21 291 1 347 187 135 54 chr17 9083766 9083877 -76354603 - FLAM_A SINE Alu -15 118 1 21 82 0 0 chr17 9083908 9083957 -76354523 + AT_rich Low_complexity Low_complexity 1 49 0 213 377 0 0 chr17 9084211 9084288 -76354192 - L2 LINE L2 -11 3261 3185 21 36 0 0 chr17 9084872 9084900 -76353580 + AT_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 9085062 9085083 -76353397 + (GA)n Simple_repeat Simple_repeat 2 22 0 2290 76 3 23 chr17 9086075 9086377 -76352103 - AluSx SINE Alu -16 296 1 2539 82 0 0 chr17 9086759 9087064 -76351416 - AluSx SINE Alu 0 312 1 517 139 13 0 chr17 9087414 9087493 -76350987 - Tigger7 DNA MER2_type 0 2487 2408 1442 181 3 60 chr17 9087496 9087668 -76350812 - Tigger7 DNA MER2_type -284 266 115 2562 40 7 7 chr17 9087668 9087970 -76350510 + AluY SINE Alu 1 302 -9 1442 181 3 60 chr17 9087970 9088079 -76350401 - Tigger7 DNA MER2_type -435 115 1 1785 148 50 7 chr17 9088209 9088486 -76349994 + AluJo SINE Alu 5 293 -19 2349 82 0 19 chr17 9088489 9088804 -76349676 + AluSg SINE Alu 1 309 -1 955 278 65 45 chr17 9090251 9090412 -76348068 - MLT1L LTR MaLR -8 607 451 2144 187 49 28 chr17 9090412 9090905 -76347575 - MLT1D LTR MaLR -2 503 1 955 278 65 45 chr17 9090905 9091192 -76347288 - MLT1L LTR MaLR -164 451 150 2409 75 0 0 chr17 9091425 9091718 -76346762 - AluY SINE Alu -18 293 1 468 232 118 63 chr17 9092049 9092098 -76346382 - LTR50 LTR ERVL -1 794 749 2562 53 0 10 chr17 9092098 9092401 -76346079 - AluY SINE Alu -11 300 1 468 232 118 63 chr17 9092401 9092790 -76345690 - LTR50 LTR ERVL -46 749 213 2118 115 0 0 chr17 9092806 9093084 -76345396 - AluY SINE Alu -33 278 1 684 199 70 0 chr17 9093195 9093351 -76345129 - LTR50 LTR ERVL -628 167 1 2345 107 0 0 chr17 9093660 9093968 -76344512 + AluSq SINE Alu 1 308 -5 797 253 5 5 chr17 9094026 9094224 -76344256 + MIR SINE MIR 11 208 -54 3788 112 6 6 chr17 9094887 9095414 -76343066 - MER1A DNA MER1_type 0 527 1 2143 112 0 3 chr17 9095709 9095994 -76342486 + AluSx SINE Alu 1 284 -28 444 256 52 47 chr17 9096436 9096608 -76341872 + MIR SINE MIR 74 246 -16 1948 105 36 39 chr17 9096761 9096895 -76341585 + AluSx SINE Alu 1 134 -178 2442 77 3 3 chr17 9096895 9097194 -76341286 + AluSp SINE Alu 1 299 -14 1948 105 36 39 chr17 9097194 9097364 -76341116 + AluSx SINE Alu 134 304 -8 2329 101 0 0 chr17 9097992 9098290 -76340190 - AluSg SINE Alu -12 298 1 387 319 103 25 chr17 9099032 9099236 -76339244 - MIR SINE MIR -37 225 6 2279 84 0 10 chr17 9099243 9099540 -76338940 - AluSg SINE Alu -16 294 1 228 296 38 32 chr17 9099958 9100144 -76338336 + L2 LINE L2 2493 2679 -635 2005 132 0 33 chr17 9100161 9100465 -76338015 - AluSx SINE Alu -18 294 1 718 144 8 8 chr17 9101924 9102042 -76336438 - FLAM_C SINE Alu -11 122 5 203 263 28 117 chr17 9102179 9102358 -76336122 - L3 LINE CR1 -514 1063 901 2303 80 6 13 chr17 9103584 9103897 -76334583 - AluY SINE Alu 0 311 1 419 224 84 9 chr17 9103941 9104048 -76334432 + L2 LINE L2 3193 3307 -6 2516 74 0 0 chr17 9105425 9105724 -76332756 - AluSx SINE Alu -13 299 1 2368 97 0 0 chr17 9106109 9106407 -76332073 + AluSc SINE Alu 1 298 -11 234 0 0 0 chr17 9106569 9106595 -76331885 + (A)n Simple_repeat Simple_repeat 1 26 0 333 130 13 117 chr17 9107833 9107910 -76330570 + AluY SINE Alu 119 187 -114 3999 173 44 33 chr17 9108011 9108416 -76330064 - L1P LINE L1 -924 5222 4823 2116 119 13 7 chr17 9108416 9108718 -76329762 - AluSx SINE Alu -8 304 1 3999 173 44 33 chr17 9108718 9108821 -76329659 - L1P LINE L1 -1323 4823 4723 2182 128 0 0 chr17 9108821 9109126 -76329354 - AluSx SINE Alu -7 305 1 3999 173 44 33 chr17 9109126 9109525 -76328955 - L1P LINE L1 -1423 4723 4304 671 227 8 105 chr17 9110014 9110261 -76328219 - L2 LINE L2 -5 3308 3086 1739 152 3 44 chr17 9110279 9110575 -76327905 + AluJb SINE Alu 1 284 -28 228 167 71 0 chr17 9110719 9110761 -76327719 + MER5A DNA MER1_type 143 187 -2 369 58 0 0 chr17 9110857 9110909 -76327571 + (GA)n Simple_repeat Simple_repeat 1 52 0 2382 88 0 13 chr17 9111456 9111763 -76326717 - AluSx SINE Alu -9 303 1 232 314 107 25 chr17 9111877 9111998 -76326482 - MIR SINE MIR -78 184 54 1637 148 10 40 chr17 9112275 9112572 -76325908 - AluJo SINE Alu -8 304 17 389 295 74 0 chr17 9112751 9112900 -76325580 - L1ME LINE L1 -334 5787 5628 2170 114 0 0 chr17 9113682 9113962 -76324518 - AluSq SINE Alu -33 280 1 1950 182 88 29 chr17 9114140 9114617 -76323863 + MLT1D LTR MaLR 1 505 0 1295 188 62 90 chr17 9114687 9115220 -76323260 + L1MC5 LINE L1 7408 7925 -36 2201 132 0 7 chr17 9115694 9116004 -76322476 + AluSx SINE Alu 3 310 -2 2258 108 0 0 chr17 9116502 9116789 -76321691 - AluSg SINE Alu -23 287 1 287 244 24 0 chr17 9116828 9116910 -76321570 - MIR SINE MIR -149 113 30 2438 25 0 11 chr17 9117841 9118120 -76320360 + AluY SINE Alu 28 303 -8 1630 157 36 11 chr17 9118409 9118689 -76319791 - AluJo SINE Alu -15 297 11 334 288 86 22 chr17 9118929 9119068 -76319412 + MIR SINE MIR 7 154 -108 296 209 122 43 chr17 9119166 9119281 -76319199 + MIR SINE MIR 89 212 -50 2154 130 0 0 chr17 9119684 9119976 -76318504 - AluSq SINE Alu -21 292 1 1204 83 0 0 chr17 9120165 9120321 -76318159 - AluY SINE Alu 0 311 156 2352 84 0 7 chr17 9120531 9120827 -76317653 - AluSg SINE Alu -16 294 1 236 290 93 19 chr17 9121277 9121384 -76317096 + MIR3 SINE MIR 68 182 -26 335 270 225 19 chr17 9122095 9122362 -76316118 - L1MC4a LINE L1 -1963 5845 5524 2259 122 0 0 chr17 9122364 9122675 -76315805 + AluSx SINE Alu 1 311 -1 1787 156 29 13 chr17 9122682 9122989 -76315491 + AluSx SINE Alu 1 312 0 1443 167 15 0 chr17 9123194 9123457 -76315023 - AluSx SINE Alu -45 267 1 27 73 0 0 chr17 9123580 9123635 -76314845 + AT_rich Low_complexity Low_complexity 1 55 0 1157 196 9 9 chr17 9123662 9123881 -76314599 - MER20 DNA MER1_type 0 219 1 231 67 0 0 chr17 9124277 9124307 -76314173 + MADE1 DNA Mariner 1 30 -50 1215 167 35 129 chr17 9124623 9124941 -76313539 - AluJo SINE Alu -16 296 9 22 35 0 0 chr17 9124951 9124980 -76313500 + AT_rich Low_complexity Low_complexity 1 29 0 43942 31 22 1 chr17 9124988 9130875 -76307605 + L1HS LINE L1 1 6017 -138 372 43 0 0 chr17 9131012 9131058 -76307422 + (CA)n Simple_repeat Simple_repeat 1 46 0 657 200 86 38 chr17 9131788 9131998 -76306482 + L2 LINE L2 3008 3227 -86 298 300 110 21 chr17 9132171 9132362 -76306118 - MIR3 SINE MIR -50 212 8 851 165 0 0 chr17 9132386 9132519 -76305961 + FLAM_C SINE Alu 1 133 0 2496 66 0 7 chr17 9133301 9133606 -76304874 + AluSg SINE Alu 1 303 -7 375 328 71 75 chr17 9133940 9134851 -76303629 + L2 LINE L2 2304 3259 -13 221 387 20 20 chr17 9135868 9136072 -76302408 - L2 LINE L2 -624 2690 2487 207 69 0 0 chr17 9136293 9136322 -76302158 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 308 240 125 10 chr17 9136330 9136434 -76302046 - L2 LINE L2 -23 3290 3175 1869 58 8 62 chr17 9137130 9137388 -76301092 + AluY SINE Alu 1 244 -67 27 0 0 0 chr17 9137504 9137531 -76300949 + AT_rich Low_complexity Low_complexity 1 27 0 229 248 0 62 chr17 9138323 9138436 -76300044 + L1ME3A LINE L1 4398 4503 -1643 681 215 0 8 chr17 9138437 9138567 -76299913 - MER44D DNA MER2_type -1 704 576 559 111 127 63 chr17 9138565 9138691 -76299789 - MER44D DNA MER2_type -197 412 9 * 2490 229 83 30 chr17 9138725 9139745 -76298735 + L1ME3A LINE L1 4512 5581 -583 252 139 0 0 chr17 9139786 9139822 -76298658 + L1ME3A LINE L1 5677 5712 -458 2388 66 0 13 chr17 9139822 9140125 -76298355 - AluY SINE Alu -12 299 1 915 185 6 0 chr17 9140136 9140298 -76298182 - FAM SINE Alu -4 45 1 1413 242 106 9 chr17 9140302 9140727 -76297753 + L1ME3A LINE L1 5696 6161 -9 314 322 8 8 chr17 9140739 9140857 -76297623 + (CATATA)n Simple_repeat Simple_repeat 6 123 0 234 0 0 0 chr17 9140876 9140902 -76297578 + (TC)n Simple_repeat Simple_repeat 2 27 0 250 298 0 12 chr17 9141191 9141275 -76297205 + T-rich Low_complexity Low_complexity 1 83 0 2106 74 7 44 chr17 9141542 9141839 -76296641 + AluSg SINE Alu 1 286 -24 811 301 93 23 chr17 9142008 9142479 -76296001 - L1MC4a LINE L1 -1868 5940 5437 1691 134 0 0 chr17 9142699 9142946 -76295534 - AluJo SINE Alu -23 289 43 2684 17 0 0 chr17 9142946 9143235 -76295245 - AluYb8 SINE Alu -12 306 18 2037 106 32 0 chr17 9143263 9143547 -76294933 - AluSq SINE Alu -7 306 14 314 303 121 0 chr17 9143852 9143951 -76294529 - MIR SINE MIR -68 140 30 2545 69 3 0 chr17 9144504 9144809 -76293671 + AluY SINE Alu 1 306 -5 207 225 169 14 chr17 9144936 9145007 -76293473 - MER5B DNA MER1_type 0 178 97 2097 136 0 3 chr17 9145040 9145335 -76293145 + AluSx SINE Alu 1 294 -18 243 79 0 0 chr17 9145354 9145392 -76293088 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 2076 188 17 8 chr17 9145549 9145911 -76292569 + MLT1A1 LTR MaLR 1 365 0 955 235 167 48 chr17 9146200 9146660 -76291820 + Tigger8 DNA MER2_type 2 516 -150 183 205 0 0 chr17 9146733 9146772 -76291708 + (TA)n Simple_repeat Simple_repeat 2 40 0 1965 143 30 33 chr17 9146772 9146820 -76291660 - L1MA5 LINE L1 -3 6297 6250 2361 91 0 0 chr17 9146820 9147118 -76291362 - AluY SINE Alu -13 298 1 1965 143 30 33 chr17 9147118 9147432 -76291048 - L1MA5 LINE L1 -50 6250 5936 1904 138 3 7 chr17 9147550 9147833 -76290647 - AluSx SINE Alu -30 282 1 205 308 0 31 chr17 9147928 9147993 -76290487 - L2 LINE L2 0 3313 3251 2348 75 0 7 chr17 9148154 9148449 -76290031 - AluSq SINE Alu -20 293 1 1362 174 114 0 chr17 9148453 9148734 -76289746 - L1MA7 LINE L1 -241 6050 5738 1218 139 32 5 chr17 9148735 9148951 -76289529 + L1MA8 LINE L1 6070 6291 0 2158 101 0 0 chr17 9148954 9149231 -76289249 + AluSc SINE Alu 1 277 -32 551 135 10 0 chr17 9149231 9149327 -76289153 + GA-rich Low_complexity Low_complexity 2 98 0 2103 127 10 0 chr17 9149911 9150210 -76288270 + AluSq SINE Alu 1 302 -11 1259 196 4 21 chr17 9150505 9150745 -76287735 - MER46A DNA MER2_type 0 236 1 2241 114 7 0 chr17 9151164 9151470 -76287010 - AluSp SINE Alu -5 308 1 2089 144 0 3 chr17 9151672 9151970 -76286510 - AluSx SINE Alu -13 299 3 1482 64 0 11 chr17 9151983 9152198 -76286282 - AluYa5 SINE Alu 0 310 98 231 37 0 0 chr17 9152376 9152403 -76286077 - L1P LINE L1 -1513 4633 4607 3983 34 2 0 chr17 9152403 9152851 -76285629 + L1PA4 LINE L1 5704 6152 -3 6611 52 16 4 chr17 9153555 9154367 -76284113 - L1PA7 LINE L1 0 6154 5333 189 0 0 0 chr17 9154511 9154532 -76283948 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2428 81 0 3 chr17 9154628 9154938 -76283542 - AluY SINE Alu -2 309 1 5987 191 45 50 chr17 9154944 9155128 -76283352 + L1MC1 LINE L1 4509 4692 -1641 835 105 0 53 chr17 9155128 9155261 -76283219 + L1PA8 LINE L1 6030 6155 -17 5987 191 45 50 chr17 9155261 9155915 -76282565 + L1MC1 LINE L1 4692 5347 -986 1908 98 68 0 chr17 9155915 9156235 -76282245 + AluSx SINE Alu 1 338 0 5987 191 45 50 chr17 9156235 9156859 -76281621 + L1MC1 LINE L1 5347 5964 -369 2094 105 54 7 chr17 9156859 9157153 -76281327 + AluSc SINE Alu 1 308 -1 5987 191 45 50 chr17 9157153 9157521 -76280959 + L1MC1 LINE L1 5964 6332 -1 1567 178 21 7 chr17 9157531 9157812 -76280668 + AluJo SINE Alu 3 287 -25 180 0 0 0 chr17 9157813 9157833 -76280647 + (CA)n Simple_repeat Simple_repeat 2 21 0 668 294 65 0 chr17 9157874 9158075 -76280405 - MIR SINE MIR -31 231 18 1966 152 0 0 chr17 9158492 9158781 -76279699 + AluSx SINE Alu 1 289 -23 15722 199 31 35 chr17 9159265 9161143 -76277337 + L1MA5A LINE L1 77 1962 -4826 1990 151 0 7 chr17 9161143 9161448 -76277032 - AluSx SINE Alu -9 303 1 15722 199 31 35 chr17 9161448 9161786 -76276694 + L1MA5A LINE L1 1962 2300 -4488 2215 115 0 13 chr17 9161786 9162100 -76276380 + AluSg SINE Alu 1 310 0 15722 199 31 35 chr17 9162100 9165286 -76273194 + L1MA5A LINE L1 2300 5484 -1304 1566 167 72 0 chr17 9165286 9165549 -76272931 - AluSg SINE Alu -15 295 14 15722 199 31 35 chr17 9165549 9166039 -76272441 + L1MA5A LINE L1 5484 5975 -813 656 174 191 0 chr17 9166039 9166154 -76272326 + FLAM_A SINE Alu 1 137 -5 6264 122 23 9 chr17 9166169 9167137 -76271343 + L1MA5A LINE L1 5958 6938 -1 2317 100 3 3 chr17 9167142 9167452 -76271028 + AluSq SINE Alu 1 310 -3 219 69 0 0 chr17 9168330 9168359 -76270121 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 1832 158 0 3 chr17 9168359 9168643 -76269837 - AluJo SINE Alu -29 283 1 1594 43 0 5 chr17 9168849 9169037 -76269443 + AluY SINE Alu 25 211 -100 706 97 0 39 chr17 9169037 9169140 -76269340 + L1MB5 LINE L1 6075 6173 -1 252 321 27 0 chr17 9169163 9169275 -76269205 + L1MC/D LINE L1 5797 5911 -1897 370 159 23 0 chr17 9169307 9169395 -76269085 + GA-rich Low_complexity Low_complexity 1 90 0 316 246 45 55 chr17 9169768 9169878 -76268602 + LTR67 LTR ERVL 443 551 -6 1126 289 66 23 chr17 9169953 9170431 -76268049 - L1ME LINE L1 -519 5645 5127 2180 128 0 0 chr17 9170431 9170727 -76267753 - AluSx SINE Alu -16 296 1 1126 289 66 23 chr17 9170727 9170938 -76267542 - L1ME LINE L1 -1037 5127 4927 21 0 0 0 chr17 9171209 9171230 -76267250 + AT_rich Low_complexity Low_complexity 1 21 0 289 335 45 28 chr17 9171252 9171607 -76266873 + L1M4 LINE L1 4390 4750 -1396 368 303 28 14 chr17 9171634 9171776 -76266704 - MER87 LTR ERV1 0 541 398 1051 163 33 23 chr17 9172201 9172399 -76266081 - L1MA9 LINE L1 -1 6311 6109 2279 96 3 10 chr17 9172399 9172712 -76265768 - AluSq SINE Alu -2 311 1 1051 163 33 23 chr17 9172712 9172728 -76265752 - L1MA9 LINE L1 -203 6109 6095 497 125 0 57 chr17 9172729 9172817 -76265663 + L1MB1 LINE L1 5806 5888 -301 439 231 231 8 chr17 9172954 9173084 -76265396 + MER5A DNA MER1_type 24 182 -7 2085 99 0 18 chr17 9173177 9173459 -76265021 + AluSg SINE Alu 1 277 -33 180 0 0 0 chr17 9173459 9173479 -76265001 + (CA)n Simple_repeat Simple_repeat 1 20 0 2317 89 3 10 chr17 9174071 9174385 -76264095 + AluSx SINE Alu 1 312 0 6089 122 14 2 chr17 9174654 9175608 -76262872 - L1PA13 LINE L1 0 6163 5195 488 214 10 10 chr17 9175705 9175808 -76262672 - MER5B DNA MER1_type -1 177 75 926 159 0 41 chr17 9175828 9175869 -76262611 - L1 LINE L1 -2018 4128 4087 2672 137 167 30 chr17 9175869 9176409 -76262071 + LTR18B LTR ERVL 1 614 0 926 159 0 41 chr17 9176409 9176537 -76261943 - L1 LINE L1 -2059 4087 3966 767 74 21 0 chr17 9176564 9176659 -76261821 - AluSp/q SINE Alu -15 298 202 1718 136 4 0 chr17 9176659 9176916 -76261564 + AluSx SINE Alu 50 307 -5 2422 96 3 0 chr17 9177240 9177552 -76260928 + AluSq SINE Alu 1 313 0 520 172 0 0 chr17 9178329 9178416 -76260064 - MER5B DNA MER1_type 0 178 92 250 325 35 9 chr17 9178629 9178743 -76259737 - MLT1K LTR MaLR -364 224 108 2335 98 3 3 chr17 9178820 9179127 -76259353 - AluSp SINE Alu -6 307 1 331 263 45 23 chr17 9179203 9179336 -76259144 - L1MC4a LINE L1 -1916 5892 5757 1893 138 7 7 chr17 9179386 9179677 -76258803 + AluJo SINE Alu 2 292 -20 2847 147 29 27 chr17 9179829 9179970 -76258510 - L1MB8 LINE L1 -15 6163 6024 2267 86 0 25 chr17 9179970 9180284 -76258196 + AluSq SINE Alu 1 306 -7 2847 147 29 27 chr17 9180284 9180658 -76257822 - L1MB8 LINE L1 -154 6024 5647 642 207 59 0 chr17 9181095 9181230 -76257250 + MER5A DNA MER1_type 7 149 -40 2282 114 0 0 chr17 9181239 9181545 -76256935 - AluSx SINE Alu -6 306 1 1647 123 0 0 chr17 9181549 9181785 -76256695 + AluSq SINE Alu 78 313 0 1728 110 8 0 chr17 9182683 9182919 -76255561 - AluSx SINE Alu -13 299 62 22 35 0 0 chr17 9183429 9183458 -76255022 + AT_rich Low_complexity Low_complexity 1 29 0 610 82 20 0 chr17 9183804 9183902 -76254578 + (TA)n Simple_repeat Simple_repeat 1 100 0 392 255 131 56 chr17 9184002 9184269 -76254211 - L1MC4a LINE L1 -375 5746 5460 2071 133 0 3 chr17 9184300 9184593 -76253887 - AluJb SINE Alu -14 298 7 1200 194 15 0 chr17 9184680 9184886 -76253594 - MER58A DNA MER1_type -15 209 1 2212 100 3 0 chr17 9185136 9185427 -76253053 + AluSx SINE Alu 1 292 -20 4058 131 63 44 chr17 9185863 9186156 -76252324 + MER49 LTR ERV1 1 287 -636 2056 109 41 10 chr17 9186156 9186450 -76252030 + AluSx SINE Alu 1 303 -9 4058 131 63 44 chr17 9186450 9186880 -76251600 + MER49 LTR ERV1 287 738 -185 2201 102 0 0 chr17 9186880 9187192 -76251288 - AluSx SINE Alu 0 312 1 321 233 189 0 chr17 9189602 9189692 -76248788 - MIR SINE MIR -57 151 45 2474 63 3 10 chr17 9190164 9190465 -76248015 + AluSp SINE Alu 1 299 -14 21 36 0 0 chr17 9190618 9190646 -76247834 + AT_rich Low_complexity Low_complexity 1 28 0 301 230 81 54 chr17 9190646 9190700 -76247780 - L1ME4a LINE L1 -249 5872 5821 2184 115 3 16 chr17 9190700 9191012 -76247468 - AluSx SINE Alu -4 308 1 301 230 81 54 chr17 9191012 9191105 -76247375 - L1ME4a LINE L1 -300 5821 5721 384 192 0 64 chr17 9191268 9191320 -76247160 - L1ME4a LINE L1 -483 5638 5591 4123 93 9 52 chr17 9191320 9191957 -76246523 - MER4B LTR ERV1 0 610 1 384 192 0 64 chr17 9191957 9191982 -76246498 - L1ME4a LINE L1 -530 5591 5566 181 315 54 45 chr17 9191993 9192104 -76246376 - MIR SINE MIR -55 153 42 2279 94 0 0 chr17 9192293 9192570 -76245910 + AluSg SINE Alu 1 277 -33 182 62 31 0 chr17 9192572 9192604 -76245876 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 286 209 48 38 chr17 9192960 9193065 -76245415 - L1MC5 LINE L1 -58 7903 7798 2330 88 3 7 chr17 9193068 9193362 -76245118 - AluSx SINE Alu -14 298 6 901 102 0 8 chr17 9193381 9193509 -76244971 - AluSg/x SINE Alu -10 302 176 568 206 23 39 chr17 9193604 9193769 -76244711 + MER5B DNA MER1_type 15 189 0 200 176 0 68 chr17 9194453 9194601 -76243879 + (TA)n Simple_repeat Simple_repeat 2 139 0 2259 101 7 3 chr17 9195026 9195334 -76243146 - AluSg SINE Alu -1 309 1 565 251 222 21 chr17 9195552 9195831 -76242649 + L2 LINE L2 2941 3275 -38 750 247 80 13 chr17 9195861 9196100 -76242380 + MIR SINE MIR 2 256 -6 2449 65 3 0 chr17 9196201 9196493 -76241987 + AluY SINE Alu 1 293 -18 294 194 118 91 chr17 9196873 9197014 -76241466 - MER58 DNA MER1_type 0 2420 2284 2171 125 3 0 chr17 9197014 9197309 -76241171 + AluSx SINE Alu 1 296 -16 294 194 118 91 chr17 9197309 9197362 -76241118 - MER58 DNA MER1_type -136 2284 28 451 277 91 29 chr17 9197423 9197697 -76240783 - L1MC4a LINE L1 -1237 6571 6281 * 4751 114 16 57 chr17 9197688 9198192 -76240288 - L1PA13 LINE L1 -2 6161 5701 2369 96 0 0 chr17 9198192 9198495 -76239985 - AluSq SINE Alu -10 303 1 4751 114 16 57 chr17 9198495 9198795 -76239685 - L1PA13 LINE L1 -462 5701 5390 212 229 33 33 chr17 9200583 9200644 -76237836 - MER5A DNA MER1_type -84 105 45 277 279 54 9 chr17 9200958 9201069 -76237411 - L3 LINE CR1 -1119 458 343 4755 112 48 36 chr17 9201524 9202294 -76236186 + MER4E LTR ERV1 1 779 0 810 118 0 8 chr17 9202410 9202529 -76235951 + FLAM_C SINE Alu 1 118 -15 23 0 0 0 chr17 9202687 9202710 -76235770 + AT_rich Low_complexity Low_complexity 1 23 0 16011 140 25 24 chr17 9202889 9204995 -76233485 + Tigger2 DNA MER2_type 28 2129 -589 2208 93 3 7 chr17 9204995 9205284 -76233196 + AluSc SINE Alu 3 290 -19 16011 140 25 24 chr17 9205284 9205802 -76232678 + Tigger2 DNA MER2_type 2129 2659 -59 2394 82 0 3 chr17 9205802 9206107 -76232373 + AluSg SINE Alu 1 304 -6 16011 140 25 24 chr17 9206107 9206168 -76232312 + Tigger2 DNA MER2_type 2659 2718 0 690 217 123 77 chr17 9206180 9206636 -76231844 - HAL1 LINE L1 -167 2340 1864 702 220 52 36 chr17 9206877 9207094 -76231386 - LTR41 LTR ERVL -553 242 1 21 57 0 0 chr17 9207293 9207328 -76231152 + AT_rich Low_complexity Low_complexity 1 35 0 2334 89 0 3 chr17 9207328 9207620 -76230860 + AluSp SINE Alu 1 291 -22 249 33 0 0 chr17 9207624 9207654 -76230826 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 278 281 68 52 chr17 9208142 9208359 -76230121 + MIR SINE MIR 3 224 -38 2430 82 0 7 chr17 9209046 9209351 -76229129 + AluSx SINE Alu 1 303 -9 2478 69 7 0 chr17 9209353 9209659 -76228821 + AluY SINE Alu 1 308 -3 1847 183 0 0 chr17 9210329 9210640 -76227840 - AluSq SINE Alu 0 313 3 2412 102 0 0 chr17 9212215 9212528 -76225952 - AluSq SINE Alu 0 313 1 1546 181 72 3 chr17 9212840 9213133 -76225347 + MER39 LTR ERV1 1 313 -394 459 172 21 0 chr17 9213133 9213226 -76225254 + FLAM_C SINE Alu 49 143 0 358 218 13 13 chr17 9213226 9213304 -76225176 + GA-rich Low_complexity Low_complexity 1 78 0 732 120 14 21 chr17 9213306 9213448 -76225032 + (GGAA)n Simple_repeat Simple_repeat 3 143 0 1122 157 6 0 chr17 9213449 9213621 -76224859 + AluJb SINE Alu 129 301 -11 1615 130 8 15 chr17 9213621 9213883 -76224597 + MER39 LTR ERV1 307 566 -141 672 92 49 37 chr17 9213884 9214048 -76224432 + CT-rich Low_complexity Low_complexity 4 169 0 213 57 0 94 chr17 9214059 9214112 -76224368 + (TTCTCC)n Simple_repeat Simple_repeat 4 51 0 2430 82 10 0 chr17 9214113 9214418 -76224062 - AluSp SINE Alu -5 308 1 835 200 7 7 chr17 9214419 9214574 -76223906 + MER39 LTR ERV1 553 707 0 440 275 87 115 chr17 9214728 9214874 -76223606 - LTR67 LTR ERVL 0 557 408 2031 145 30 0 chr17 9214874 9215171 -76223309 + AluJb SINE Alu 1 306 -6 440 275 87 115 chr17 9215171 9215563 -76222917 - LTR67 LTR ERVL -149 408 34 870 225 6 11 chr17 9215666 9215844 -76222636 - MER45A DNA AcHobo 0 178 2 974 148 0 7 chr17 9216026 9216175 -76222305 - Tigger5 DNA MER2_type 0 2323 2176 2566 40 0 0 chr17 9216275 9216571 -76221909 + AluY SINE Alu 16 311 0 386 286 41 7 chr17 9216589 9216736 -76221744 - L1ME4a LINE L1 -259 5862 5711 883 254 152 55 chr17 9216744 9217126 -76221354 - LTR41 LTR ERVL -9 764 346 1470 186 0 58 chr17 9217299 9217461 -76221019 - AluJo SINE Alu -19 293 156 2379 77 0 10 chr17 9217461 9217761 -76220719 - AluY SINE Alu -14 297 1 1470 186 0 58 chr17 9217761 9217909 -76220571 - AluJo SINE Alu -156 156 1 392 183 0 0 chr17 9217909 9217980 -76220500 - LTR41 LTR ERVL -702 71 1 255 309 21 0 chr17 9217987 9218084 -76220396 - L1ME4a LINE L1 -410 5711 5613 21 36 0 0 chr17 9218237 9218265 -76220215 + AT_rich Low_complexity Low_complexity 1 28 0 220 338 146 20 chr17 9219580 9219794 -76218686 - MIR3 SINE MIR -12 250 12 2118 106 21 3 chr17 9219914 9220198 -76218282 + AluSg SINE Alu 5 293 -17 2229 110 0 3 chr17 9220587 9220888 -76217592 + AluSg SINE Alu 1 300 -10 371 189 0 0 chr17 9221184 9221258 -76217222 + MER5B DNA MER1_type 2 75 -103 200 176 0 39 chr17 9221258 9221309 -76217171 + T-rich Low_complexity Low_complexity 2 50 0 1922 187 19 83 chr17 9221334 9221398 -76217082 - MLT1D LTR MaLR 0 505 438 2259 98 0 0 chr17 9221398 9221683 -76216797 + AluSx SINE Alu 1 285 -27 234 0 9 0 chr17 9221683 9221753 -76216727 + (CA)n Simple_repeat Simple_repeat 2 27 0 249 33 0 0 chr17 9221752 9221782 -76216698 + (TC)n Simple_repeat Simple_repeat 2 31 0 1922 187 19 83 chr17 9221753 9222231 -76216249 - MLT1D LTR MaLR -65 440 1 2368 92 3 0 chr17 9222235 9222530 -76215950 - AluSq SINE Alu -17 296 1 450 210 0 10 chr17 9222547 9222647 -76215833 + MER5B DNA MER1_type 80 178 0 1585 170 0 28 chr17 9223723 9224005 -76214475 - AluJb SINE Alu -37 275 2 875 219 136 24 chr17 9224192 9224443 -76214037 - L1MC4 LINE L1 -1037 7005 6727 530 234 226 13 chr17 9224455 9224690 -76213790 - HAL1 LINE L1 -1018 1489 1205 2310 108 0 0 chr17 9224691 9224979 -76213501 + AluSx SINE Alu 3 290 -22 254 313 67 13 chr17 9225022 9225172 -76213308 - L1M4 LINE L1 -1880 4266 4109 352 293 14 33 chr17 9225259 9225474 -76213006 - L1M4 LINE L1 -2248 3898 3688 2399 41 41 0 chr17 9225907 9226197 -76212283 - AluY SINE Alu -9 302 1 201 179 60 45 chr17 9226868 9226935 -76211545 + L3 LINE CR1 1296 1363 -214 506 63 13 0 chr17 9227930 9228009 -76210471 + (TA)n Simple_repeat Simple_repeat 2 81 0 2091 117 38 0 chr17 9228019 9228310 -76210170 + AluSx SINE Alu 1 302 -10 232 115 0 135 chr17 9228818 9228837 -76209643 - Alu SINE Alu -157 151 131 2508 67 0 0 chr17 9228837 9229135 -76209345 - AluY SINE Alu -13 298 1 232 115 0 135 chr17 9229135 9229167 -76209313 - Alu SINE Alu -177 131 107 2537 82 0 0 chr17 9229824 9230127 -76208353 - AluSx SINE Alu -9 303 1 2093 124 10 26 chr17 9230740 9231047 -76207433 - AluSx SINE Alu -10 302 1 2414 91 0 7 chr17 9231298 9231607 -76206873 - AluSg SINE Alu -3 307 1 27 0 0 0 chr17 9231609 9231636 -76206844 + AT_rich Low_complexity Low_complexity 1 27 0 2138 123 3 0 chr17 9231672 9231987 -76206493 - AluSg SINE Alu 0 310 1 2284 78 0 0 chr17 9232212 9232494 -76205986 - AluY SINE Alu -3 308 27 357 292 167 16 chr17 9232662 9232854 -76205626 - HAL1 LINE L1 -586 1921 1701 256 293 171 29 chr17 9233199 9233339 -76205141 - MIR3 SINE MIR -28 180 21 2258 90 0 3 chr17 9233683 9233971 -76204509 + AluSx SINE Alu 1 287 -25 2349 86 0 10 chr17 9234553 9234854 -76203626 - AluY SINE Alu -13 298 1 211 219 0 0 chr17 9235552 9235593 -76202887 - MER5B DNA MER1_type -137 41 1 2087 100 7 42 chr17 9235962 9236272 -76202208 + AluSx SINE Alu 3 301 -11 390 270 158 13 chr17 9236674 9236826 -76201654 + MER5A DNA MER1_type 10 183 -6 2361 60 7 0 chr17 9236851 9237167 -76201313 - AluY SINE Alu 0 318 1 2216 121 3 13 chr17 9237171 9237486 -76200994 - AluSx SINE Alu 0 312 1 233 315 47 24 chr17 9237552 9237679 -76200801 - MER5B DNA MER1_type -48 130 1 233 260 301 7 chr17 9237731 9237877 -76200603 - MIR SINE MIR -24 238 50 387 293 45 57 chr17 9241515 9241672 -76196808 - L2 LINE L2 -1 3271 3117 383 260 130 21 chr17 9242158 9242350 -76196130 - MLT1J2 LTR MaLR -234 216 4 2283 83 7 20 chr17 9242515 9242815 -76195665 + AluSq SINE Alu 1 296 -17 427 310 114 41 chr17 9243074 9243364 -76195116 - MLT1L LTR MaLR -5 610 300 1184 283 85 37 chr17 9243433 9243834 -76194646 - L1MC4a LINE L1 -1750 6058 5621 2695 50 0 0 chr17 9243834 9244137 -76194343 + AluY SINE Alu 5 307 -4 1184 283 85 37 chr17 9244137 9244297 -76194183 - L1MC4a LINE L1 -2187 5621 5470 296 299 130 54 chr17 9244384 9244764 -76193716 - L1MC4a LINE L1 -1071 5075 4644 2296 90 3 3 chr17 9244764 9245053 -76193427 - AluSc SINE Alu -20 289 1 296 299 130 54 chr17 9245053 9245187 -76193293 - L1MC4a LINE L1 -1502 4644 4522 279 0 0 0 chr17 9245195 9245226 -76193254 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 276 279 72 53 chr17 9245561 9245769 -76192711 - MLT1L LTR MaLR -398 217 6 2296 244 89 64 chr17 9246237 9246401 -76192079 + L1MC4a LINE L1 4993 5151 -995 2589 43 0 10 chr17 9246401 9246703 -76191777 + AluY SINE Alu 1 299 -12 2296 244 89 64 chr17 9246703 9247416 -76191064 + L1MC4a LINE L1 5151 5098 -1048 2333 78 0 3 chr17 9247416 9247763 -76190717 - AluSq SINE Alu 0 346 1 2296 244 89 64 chr17 9247763 9248074 -76190406 + L1MC4a LINE L1 5097 5399 -747 873 152 49 0 chr17 9248108 9248272 -76190208 + L1P LINE L1 3726 3897 -2249 304 247 0 0 chr17 9248727 9248804 -76189676 - L1PB4 LINE L1 -2 6154 6078 2241 120 0 0 chr17 9248843 9249143 -76189337 + AluSg SINE Alu 1 300 -10 2141 129 0 3 chr17 9249379 9249681 -76188799 - AluSg SINE Alu -9 301 1 854 119 0 0 chr17 9250163 9250281 -76188199 - AluSq/x SINE Alu -195 118 1 208 230 11 103 chr17 9250589 9250676 -76187804 + L2 LINE L2 3186 3264 -8 2395 77 0 7 chr17 9250947 9251247 -76187233 - AluSc SINE Alu -11 298 1 26 0 0 0 chr17 9251518 9251544 -76186936 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr17 9251583 9251627 -76186853 + AT_rich Low_complexity Low_complexity 1 44 0 2352 89 3 7 chr17 9251876 9252179 -76186301 + AluSx SINE Alu 1 302 -10 714 203 0 0 chr17 9252269 9252392 -76186088 + FLAM_C SINE Alu 2 124 -9 2010 222 13 57 chr17 9252449 9252812 -76185668 - L1ME1 LINE L1 -5 6230 5902 2376 91 3 10 chr17 9252812 9253119 -76185361 - AluSq SINE Alu -8 305 1 2010 222 13 57 chr17 9253119 9253355 -76185125 - L1ME1 LINE L1 -333 5902 5657 1842 162 74 16 chr17 9253366 9253743 -76184737 - L1MA8 LINE L1 -5 6286 5888 1277 132 55 9 chr17 9253732 9253951 -76184529 - L1MA8 LINE L1 -633 5658 5430 * 2355 81 14 0 chr17 9253953 9254248 -76184232 - AluY SINE Alu -12 299 1 2110 98 44 0 chr17 9254250 9254525 -76183955 - AluSx SINE Alu -19 293 7 1427 232 124 25 chr17 9254525 9254916 -76183564 - L1ME1 LINE L1 -1307 4908 4452 2322 82 7 10 chr17 9254916 9255219 -76183261 - AluY SINE Alu -9 302 1 1427 232 124 25 chr17 9255219 9255344 -76183136 - L1ME1 LINE L1 -1763 4452 4341 1410 206 61 43 chr17 9255354 9255747 -76182733 - L1ME1 LINE L1 -5968 428 29 2263 91 7 3 chr17 9256242 9256540 -76181940 + AluSc SINE Alu 1 299 -10 2025 87 4 0 chr17 9257219 9257471 -76181009 - AluSx SINE Alu -59 253 1 603 216 102 41 chr17 9257471 9257894 -76180586 - HAL1b LINE L1 -318 1030 531 2403 100 0 0 chr17 9257894 9258195 -76180285 - AluSx SINE Alu -11 301 1 603 216 102 41 chr17 9258195 9258302 -76180178 - HAL1b LINE L1 -817 531 432 515 222 7 42 chr17 9259058 9259202 -76179278 - MER5A DNA MER1_type -25 164 26 499 150 0 70 chr17 9259409 9259509 -76178971 + AluJo SINE Alu 69 161 -151 1220 185 15 102 chr17 9259532 9259857 -76178623 + AluJo SINE Alu 1 297 -15 4713 76 136 57 chr17 9260279 9261045 -76177435 - LTR12 LTR ERV1 0 826 1 492 314 52 16 chr17 9261204 9261395 -76177085 + MIR SINE MIR 8 205 -57 216 208 0 0 chr17 9261395 9261436 -76177044 + (TA)n Simple_repeat Simple_repeat 2 45 -9 361 82 262 0 chr17 9261436 9261497 -76176983 + MADE1 DNA Mariner 4 80 0 216 208 0 0 chr17 9261497 9261508 -76176972 + (TA)n Simple_repeat Simple_repeat 44 54 0 23 33 0 0 chr17 9261953 9261983 -76176497 + AT_rich Low_complexity Low_complexity 1 30 0 2420 92 3 3 chr17 9262072 9262376 -76176104 - AluSx SINE Alu -8 304 1 535 99 0 0 chr17 9262777 9262848 -76175632 + AluS SINE Alu 2 72 -241 540 200 17 8 chr17 9262950 9263070 -76175410 - MIR SINE MIR -90 172 52 2385 94 0 0 chr17 9263448 9263745 -76174735 - AluSg SINE Alu -13 297 1 369 288 114 8 chr17 9263865 9263997 -76174483 + MIR SINE MIR 3 148 -114 3640 139 70 23 chr17 9265800 9265957 -76172523 + MER39 LTR ERV1 1 149 -558 2340 93 7 3 chr17 9265957 9266259 -76172221 - AluSg SINE Alu -7 303 1 3640 139 70 23 chr17 9266259 9266712 -76171768 + MER39 LTR ERV1 149 640 -67 1377 135 64 8 chr17 9266706 9267036 -76171444 - MER39 LTR ERV1 -295 412 2 * 403 273 88 67 chr17 9267038 9267379 -76171101 - LTR33 LTR ERVL -127 394 47 2206 89 7 0 chr17 9267541 9267857 -76170623 - AluSg SINE Alu 0 319 2 1881 128 0 51 chr17 9267918 9268234 -76170246 - AluSx SINE Alu 0 301 1 1485 176 66 4 chr17 9268386 9268659 -76169821 - Tigger3(Golem) DNA MER2_type -10 3019 2730 2369 105 0 0 chr17 9268659 9268963 -76169517 + AluSg SINE Alu 1 304 -6 301 262 0 0 chr17 9268997 9269058 -76169422 - Tigger3(Golem) DNA MER2_type -2956 73 13 1644 148 48 90 chr17 9269093 9269311 -76169169 - MER47A DNA MER2_type -1958 365 168 2350 74 3 0 chr17 9269311 9269596 -76168884 + AluSg SINE Alu 1 286 -24 1644 148 48 90 chr17 9269596 9269754 -76168726 - MER47A DNA MER2_type -2155 168 5 186 43 0 0 chr17 9269754 9269777 -76168703 + (TA)n Simple_repeat Simple_repeat 2 24 0 479 291 67 22 chr17 9269891 9270048 -76168432 - L1MC/D LINE L1 -2211 5597 5430 453 152 13 0 chr17 9270048 9270127 -76168353 - MER116 DNA Mariner 0 80 1 479 291 67 22 chr17 9270127 9270148 -76168332 - L1MC/D LINE L1 -2378 5430 5411 2116 68 62 52 chr17 9270165 9270474 -76168006 - AluSp SINE Alu -1 312 1 436 265 74 55 chr17 9270479 9270984 -76167496 - L1MC/D LINE L1 -750 5396 4900 192 77 0 0 chr17 9271224 9271250 -76167230 + (CA)n Simple_repeat Simple_repeat 2 27 0 2401 72 3 0 chr17 9271397 9271687 -76166793 - AluSc SINE Alu -15 294 4 870 218 16 73 chr17 9271705 9271953 -76166527 - L1ME1 LINE L1 0 6166 5933 427 303 99 68 chr17 9272292 9272913 -76165567 + L1M4 LINE L1 3144 3744 -2402 2273 65 10 39 chr17 9272913 9273249 -76165231 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9273249 9273570 -76164910 + L1M4 LINE L1 3744 4054 -2092 2450 84 7 0 chr17 9273570 9273879 -76164601 + AluY SINE Alu 1 311 0 427 303 99 68 chr17 9273879 9274207 -76164273 + L1M4 LINE L1 4054 4472 -1674 2472 84 3 0 chr17 9274341 9274652 -76163828 - AluSp SINE Alu -1 312 1 2485 67 3 3 chr17 9274962 9275262 -76163218 + AluY SINE Alu 3 302 -9 2286 99 0 0 chr17 9275849 9276172 -76162308 - AluSq SINE Alu 0 323 1 1218 170 4 39 chr17 9276887 9277116 -76161364 - AluJo SINE Alu -91 221 1 189 205 26 0 chr17 9277116 9277155 -76161325 - L2 LINE L2 -12 3260 3221 246 62 0 0 chr17 9277428 9277460 -76161020 + (T)n Simple_repeat Simple_repeat 1 32 0 266 340 21 21 chr17 9277559 9277700 -76160780 - MIR SINE MIR 0 262 122 333 221 26 0 chr17 9277783 9277860 -76160620 - MIR SINE MIR -128 134 56 1390 136 47 101 chr17 9278186 9278503 -76159977 - AluSq SINE Alu -13 300 1 2423 66 0 0 chr17 9278505 9278793 -76159687 - AluY SINE Alu -23 288 1 1195 82 0 7 chr17 9278793 9278939 -76159541 - AluSq/x SINE Alu -167 145 1 2044 108 7 4 chr17 9278960 9279239 -76159241 - AluSg SINE Alu -30 280 1 194 327 159 9 chr17 9279291 9279404 -76159076 - L2 LINE L2 -10 3262 3133 1675 164 39 96 chr17 9279598 9280006 -76158474 - MLT1B LTR MaLR -3 387 3 2420 63 0 13 chr17 9280637 9280936 -76157544 + AluY SINE Alu 1 295 -16 406 324 54 14 chr17 9281342 9281564 -76156916 + MIR SINE MIR 32 262 0 1768 150 34 7 chr17 9283241 9283534 -76154946 - AluJb SINE Alu -11 301 1 3385 280 78 58 chr17 9284425 9284899 -76153581 - HAL1 LINE L1 -11 2496 2033 1764 71 0 18 chr17 9284899 9285125 -76153355 - AluY SINE Alu -7 304 83 3385 280 78 58 chr17 9285125 9285995 -76152485 - HAL1 LINE L1 -474 2033 1182 2433 43 0 3 chr17 9285995 9286322 -76152158 - AluY SINE Alu 0 326 1 3385 280 78 58 chr17 9286322 9286542 -76151938 - HAL1 LINE L1 -1325 1182 968 219 103 0 0 chr17 9286542 9286581 -76151899 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3385 280 78 58 chr17 9286581 9286654 -76151826 - HAL1 LINE L1 -1539 968 898 2191 112 7 0 chr17 9286654 9286949 -76151531 + AluSc SINE Alu 1 297 -12 3385 280 78 58 chr17 9286949 9287442 -76151038 - HAL1 LINE L1 -1609 898 317 297 188 40 114 chr17 9287467 9287616 -76150864 - HAL1 LINE L1 -2276 231 94 344 321 49 6 chr17 9287719 9287881 -76150599 - MIR SINE MIR -87 175 7 311 283 0 28 chr17 9289396 9289502 -76148978 + MER5A DNA MER1_type 36 138 -51 350 270 0 30 chr17 9289577 9289677 -76148803 + MER5A DNA MER1_type 37 133 -56 2191 104 3 0 chr17 9291133 9291431 -76147049 - AluSg SINE Alu -1 309 11 2060 99 0 7 chr17 9292268 9292572 -76145908 + AluY SINE Alu 1 302 0 2178 100 0 0 chr17 9292769 9293050 -76145430 - AluSx SINE Alu -31 281 1 554 382 60 3 chr17 9293244 9293597 -76144883 + L2 LINE L2 2333 2705 -609 250 269 45 0 chr17 9293834 9293901 -76144579 + MIR SINE MIR 100 169 -93 462 328 85 51 chr17 9293936 9294133 -76144347 - L1M4 LINE L1 -1555 4591 4402 1932 127 24 0 chr17 9294133 9294424 -76144056 - AluSq SINE Alu -15 298 1 462 328 85 51 chr17 9294424 9294446 -76144034 - L1M4 LINE L1 -1744 4402 4382 1566 167 50 20 chr17 9294446 9294745 -76143735 - AluJb SINE Alu 0 312 5 462 328 85 51 chr17 9294745 9294899 -76143581 - L1M4 LINE L1 -1764 4382 4204 312 320 22 108 chr17 9295217 9295315 -76143165 + MIR SINE MIR 48 153 -109 1970 78 27 96 chr17 9295315 9295647 -76142833 + AluSq SINE Alu 1 309 -4 312 320 22 108 chr17 9295647 9295779 -76142701 + MIR SINE MIR 153 258 -4 624 319 153 28 chr17 9295998 9296230 -76142250 + L2 LINE L2 2251 2453 -860 2216 95 3 7 chr17 9296230 9296536 -76141944 - AluSp SINE Alu -8 305 1 624 319 153 28 chr17 9296536 9297215 -76141265 + L2 LINE L2 2453 3282 -31 1157 168 0 6 chr17 9297590 9297763 -76140717 + FAM SINE Alu 1 172 -3 2285 93 0 6 chr17 9297766 9298077 -76140403 + AluSg SINE Alu 1 309 -1 256 306 229 0 chr17 9298734 9298806 -76139674 - MIR SINE MIR -14 248 194 2246 114 0 0 chr17 9298806 9299114 -76139366 - AluSg SINE Alu -2 308 1 256 306 229 0 chr17 9299114 9299185 -76139295 - MIR SINE MIR -68 194 72 2426 84 3 0 chr17 9299651 9299961 -76138519 + AluSx SINE Alu 1 311 -1 2149 71 0 40 chr17 9299985 9300319 -76138161 - AluY SINE Alu 0 322 1 217 221 81 47 chr17 9301400 9301486 -76136994 - MIR SINE MIR -17 245 157 238 264 207 14 chr17 9302852 9302923 -76135557 - MER5A DNA MER1_type -14 175 119 2373 87 0 0 chr17 9302923 9303232 -76135248 - AluSc SINE Alu 0 309 1 2070 125 3 0 chr17 9303235 9303530 -76134950 - AluSx SINE Alu -16 296 1 238 264 207 14 chr17 9303530 9303594 -76134886 - MER5A DNA MER1_type -71 118 9 210 118 0 0 chr17 9304013 9304047 -76134433 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 337 179 0 0 chr17 9304049 9304105 -76134375 - L2 LINE L2 -9 3304 3249 2190 67 3 35 chr17 9304148 9304460 -76134020 + AluY SINE Alu 1 302 -9 196 371 78 46 chr17 9304551 9304961 -76133519 - L2 LINE L2 -13 3300 2878 2536 47 0 0 chr17 9305495 9305796 -76132684 - AluY SINE Alu -10 301 1 2254 98 0 7 chr17 9306687 9306993 -76131487 - AluSq SINE Alu -7 306 3 263 363 166 14 chr17 9307351 9307574 -76130906 - MIR SINE MIR -2 260 4 487 202 31 175 chr17 9308793 9309016 -76129464 + L2 LINE L2 3118 3308 -5 1906 154 0 16 chr17 9309558 9309870 -76128610 - AluJo SINE Alu -5 307 1 1187 241 93 46 chr17 9310064 9310097 -76128383 - MLT1G1 LTR MaLR -2 588 558 1732 182 0 0 chr17 9310097 9310394 -76128086 + AluJo SINE Alu 1 297 -15 1187 241 93 46 chr17 9310394 9310910 -76127570 - MLT1G1 LTR MaLR -32 558 5 767 255 78 3 chr17 9310914 9311220 -76127260 + L1MC4a LINE L1 5587 5917 -249 2173 64 4 11 chr17 9311221 9311501 -76126979 - AluSp SINE Alu -29 284 7 377 123 0 0 chr17 9311512 9311569 -76126911 - Alu SINE Alu -3 299 243 2171 96 23 0 chr17 9311829 9312131 -76126349 + AluSc SINE Alu 1 309 0 2231 80 0 0 chr17 9314044 9314360 -76124120 - AluSx SINE Alu 0 316 1 1217 168 0 10 chr17 9314368 9314577 -76123903 - AluJo SINE Alu -19 293 87 802 138 0 51 chr17 9314603 9314764 -76123716 - FLAM_C SINE Alu 0 156 3 403 337 76 28 chr17 9315386 9315635 -76122845 - MIR SINE MIR 0 262 2 2136 118 0 3 chr17 9316690 9316996 -76121484 - AluSx SINE Alu -7 305 1 640 265 38 19 chr17 9318072 9318283 -76120197 + L1MC5 LINE L1 7710 7924 -37 433 359 82 5 chr17 9318477 9318672 -76119808 + MIR SINE MIR 44 253 -9 2174 95 0 0 chr17 9319111 9319457 -76119023 - AluSx SINE Alu 0 346 1 338 317 119 61 chr17 9319883 9320006 -76118474 - L2 LINE L2 -38 3234 3120 2197 86 24 0 chr17 9320006 9320296 -76118184 + AluSq SINE Alu 1 297 -16 338 317 119 61 chr17 9320296 9320705 -76117775 - L2 LINE L2 -152 3120 2654 213 121 0 0 chr17 9321384 9321417 -76117063 + (CA)n Simple_repeat Simple_repeat 1 33 0 333 0 0 0 chr17 9321457 9321494 -76116986 + (CA)n Simple_repeat Simple_repeat 1 37 0 399 268 24 65 chr17 9321505 9321673 -76116807 + L1MEd LINE L1 46 206 -5913 736 261 103 0 chr17 9321699 9321894 -76116586 - MER58C DNA MER1_type 0 215 1 2252 83 0 37 chr17 9322060 9322244 -76116236 - AluSq SINE Alu 0 313 145 2436 54 0 0 chr17 9322244 9322539 -76115941 - AluY SINE Alu -16 295 1 2252 83 0 37 chr17 9322539 9322679 -76115801 - AluSq SINE Alu -168 145 1 1056 78 0 0 chr17 9322691 9322820 -76115660 - AluSq/x SINE Alu -183 129 1 595 296 0 18 chr17 9322916 9323085 -76115395 + Charlie4 DNA MER1_type 12 177 -1784 189 250 0 0 chr17 9323273 9323309 -76115171 + MIR SINE MIR 219 254 -8 2242 96 0 10 chr17 9324268 9324581 -76113899 + AluSx SINE Alu 1 310 -2 270 268 188 22 chr17 9324994 9325132 -76113348 - MARNA DNA Mariner -149 437 277 594 294 130 4 chr17 9325678 9325909 -76112571 - MLT1I LTR MaLR -149 260 1 384 322 46 7 chr17 9325909 9326061 -76112419 + MIR SINE MIR 70 227 -35 1902 95 4 0 chr17 9326084 9326336 -76112144 + AluSp SINE Alu 45 297 -16 329 243 14 0 chr17 9327138 9327208 -76111272 + MIR SINE MIR 50 120 -88 1719 85 0 4 chr17 9328065 9328300 -76110180 + AluSg/x SINE Alu 70 303 -7 432 264 193 35 chr17 9332830 9333027 -76105453 + MIR SINE MIR 23 250 -12 24 32 0 0 chr17 9334492 9334523 -76103957 + GC_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr17 9334568 9334614 -76103866 + GC_rich Low_complexity Low_complexity 1 46 0 207 0 0 0 chr17 9334700 9334723 -76103757 + (CCCG)n Simple_repeat Simple_repeat 4 26 0 630 209 78 7 chr17 9335749 9335902 -76102578 - MER5A DNA MER1_type -6 183 20 436 141 26 0 chr17 9335980 9336058 -76102422 + MER103 DNA DNA 8 87 -79 1927 118 54 98 chr17 9337188 9337596 -76100884 + MLT1B LTR MaLR 1 390 0 1717 208 3 55 chr17 9338550 9338699 -76099781 + MLT1A1 LTR MaLR 7 162 -203 1485 101 187 30 chr17 9338699 9338966 -76099514 + AluSg1 SINE Alu 1 309 0 1717 208 3 55 chr17 9338966 9339195 -76099285 + MLT1A1 LTR MaLR 162 365 0 2403 79 0 6 chr17 9339437 9339752 -76098728 + AluSq SINE Alu 1 313 0 262 241 9 111 chr17 9343704 9343812 -76094668 + MIR3 SINE MIR 89 185 -23 224 337 92 0 chr17 9345228 9345326 -76093154 + MIR SINE MIR 86 192 -70 476 261 0 0 chr17 9345517 9345697 -76092783 + (CA)n Simple_repeat Simple_repeat 1 180 0 384 211 0 0 chr17 9345739 9345881 -76092599 + (CA)n Simple_repeat Simple_repeat 1 142 0 399 300 70 70 chr17 9346309 9346706 -76091774 + L2 LINE L2 2866 3262 -10 283 211 31 31 chr17 9346751 9346879 -76091601 + (TG)n Simple_repeat Simple_repeat 2 129 0 301 149 28 50 chr17 9346893 9347074 -76091406 + (TG)n Simple_repeat Simple_repeat 1 177 0 431 106 21 50 chr17 9347100 9347241 -76091239 + (TG)n Simple_repeat Simple_repeat 1 137 0 323 138 38 46 chr17 9347272 9347543 -76090937 + (TG)n Simple_repeat Simple_repeat 1 268 0 318 219 12 24 chr17 9348370 9348452 -76090028 - MIR3 SINE MIR -54 154 74 1869 107 27 4 chr17 9349426 9349688 -76088792 - AluSg SINE Alu -9 301 34 182 259 37 0 chr17 9350109 9350163 -76088317 + MIR SINE MIR 65 120 -88 2126 119 0 16 chr17 9351129 9351432 -76087048 - AluSx SINE Alu -14 298 1 257 297 0 0 chr17 9352211 9352275 -76086205 - MIR SINE MIR -112 150 87 287 343 28 0 chr17 9353101 9353209 -76085271 - MIR3 SINE MIR -49 159 49 449 308 38 19 chr17 9354388 9354577 -76083903 - MIR SINE MIR -40 222 32 315 204 187 12 chr17 9356373 9356500 -76081980 - MIR SINE MIR -62 146 16 502 231 17 8 chr17 9356515 9356632 -76081848 - MER5B DNA MER1_type -58 120 3 198 0 0 0 chr17 9356825 9356847 -76081633 + (T)n Simple_repeat Simple_repeat 1 22 0 2125 112 0 16 chr17 9357638 9357941 -76080539 - AluSg SINE Alu -12 298 1 484 250 2 51 chr17 9358138 9358316 -76080164 - MER58B DNA MER1_type 0 341 169 340 323 80 73 chr17 9358348 9358447 -76080033 + HAL1 LINE L1 1114 1211 -1296 1344 170 76 55 chr17 9358447 9358736 -76079744 + AluJo SINE Alu 1 295 -17 340 323 80 73 chr17 9358736 9358924 -76079556 + HAL1 LINE L1 1211 1403 -1104 614 293 22 31 chr17 9358925 9359259 -76079221 + HAL1b LINE L1 427 706 -642 402 21 0 0 chr17 9359404 9359451 -76079029 + (TG)n Simple_repeat Simple_repeat 2 48 0 688 316 105 69 chr17 9359454 9359870 -76078610 + L1ME LINE L1 1856 2255 -3960 2315 79 0 0 chr17 9359870 9360161 -76078319 - AluY SINE Alu -20 291 1 688 316 105 69 chr17 9360161 9361007 -76077473 + L1ME LINE L1 2255 3829 -2386 233 247 13 0 chr17 9361012 9361089 -76077391 + MER116 DNA Mariner 1 78 -2 264 271 105 30 chr17 9362754 9362988 -76075492 + L1ME LINE L1 5290 5541 -649 312 336 15 37 chr17 9362999 9363133 -76075347 + L1ME LINE L1 5589 5719 -471 241 335 159 6 chr17 9363424 9363606 -76074874 - L2 LINE L2 -339 2975 2766 2206 106 3 0 chr17 9363766 9364068 -76074412 - AluSx SINE Alu 0 312 10 339 169 0 0 chr17 9364234 9364305 -76074175 + (TG)n Simple_repeat Simple_repeat 1 71 0 552 323 74 2 chr17 9364353 9364677 -76073803 - L2 LINE L2 -225 3088 2740 2170 100 0 0 chr17 9366450 9366750 -76071730 - AluSg SINE Alu 0 300 1 415 293 28 29 chr17 9367077 9367276 -76071204 + MIR SINE MIR 16 216 -46 270 327 63 25 chr17 9367300 9367459 -76071021 + MARNA DNA Mariner 189 353 -233 393 248 261 13 chr17 9367462 9367615 -76070865 + L2 LINE L2 3119 3309 -4 1700 184 17 0 chr17 9369063 9369356 -76069124 - AluJo SINE Alu -14 298 1 229 111 0 0 chr17 9369843 9369879 -76068601 - MER117 DNA MER1_type -49 148 113 1906 138 17 3 chr17 9370119 9370415 -76068065 + AluSq SINE Alu 13 312 -1 320 133 17 0 chr17 9370418 9370478 -76068002 + GA-rich Low_complexity Low_complexity 2 62 0 393 22 0 0 chr17 9370479 9370525 -76067955 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 253 275 161 55 chr17 9370632 9370850 -76067630 - L3 LINE CR1 -214 1363 1123 2199 111 0 13 chr17 9370869 9371185 -76067295 - AluSx SINE Alu 0 312 1 2381 80 0 0 chr17 9371481 9371792 -76066688 + AluY SINE Alu 1 311 0 1944 116 0 88 chr17 9372441 9372645 -76065835 - AluSg SINE Alu -10 300 134 243 0 0 0 chr17 9372645 9372672 -76065808 + (TG)n Simple_repeat Simple_repeat 2 28 0 1944 116 0 88 chr17 9372672 9372796 -76065684 - AluSg SINE Alu -176 134 1 241 389 37 12 chr17 9373854 9374016 -76064464 + L2 LINE L2 3107 3272 0 1045 272 75 24 chr17 9374910 9375260 -76063220 + MLT1J2 LTR MaLR 14 390 -60 2337 103 3 0 chr17 9375260 9375572 -76062908 + AluSq SINE Alu 1 313 0 1045 272 75 24 chr17 9375572 9375637 -76062843 + MLT1J2 LTR MaLR 390 450 0 1268 244 81 56 chr17 9376199 9376645 -76061835 + LTR16A1 LTR ERVL 1 457 0 2167 121 0 3 chr17 9377012 9377325 -76061155 - AluSx SINE Alu 0 312 1 499 291 11 30 chr17 9377389 9377574 -76060906 + MIR3 SINE MIR 6 187 -21 905 189 20 31 chr17 9377608 9377804 -76060676 + MER63A DNA MER1_type 1 194 -16 202 382 36 6 chr17 9378142 9378307 -76060173 + L3 LINE CR1 1277 1446 -131 232 304 89 37 chr17 9378652 9378787 -76059693 - MIR3 SINE MIR -24 184 43 339 288 7 43 chr17 9379573 9379712 -76058768 + GA-rich Low_complexity Low_complexity 3 136 0 419 219 0 24 chr17 9379768 9379850 -76058630 - MER116 DNA Mariner 0 80 1 777 224 130 0 chr17 9380002 9380194 -76058286 + MER20 DNA MER1_type 1 217 -2 2249 102 0 0 chr17 9380455 9380748 -76057732 - AluSx SINE Alu -19 293 1 2294 89 7 0 chr17 9380757 9381061 -76057419 - AluSp SINE Alu -7 306 1 366 304 127 19 chr17 9381135 9381395 -76057085 + L1MC5 LINE L1 7616 7903 -58 2509 64 3 0 chr17 9381592 9381903 -76056577 - AluSx SINE Alu 0 312 1 786 213 197 0 chr17 9382044 9382227 -76056253 - MER20 DNA MER1_type 0 219 1 722 295 73 7 chr17 9382379 9382681 -76055799 - L1ME LINE L1 -325 5796 5475 443 82 0 0 chr17 9382713 9382774 -76055706 - AluJo SINE Alu -16 296 236 892 158 0 58 chr17 9382774 9382945 -76055535 - AluJo SINE Alu -140 172 12 369 329 76 29 chr17 9383014 9383232 -76055248 - L1ME LINE L1 -759 5387 5181 2261 79 3 0 chr17 9383232 9383523 -76054957 - AluSp SINE Alu -21 292 1 369 329 76 29 chr17 9383523 9383837 -76054643 - L1ME LINE L1 -965 5181 4883 2149 115 0 0 chr17 9383837 9384132 -76054348 - AluSx SINE Alu -17 295 1 369 329 76 29 chr17 9384132 9384692 -76053788 - L1ME LINE L1 -1263 4883 4243 2212 108 0 0 chr17 9385052 9385349 -76053131 + AluSg SINE Alu 1 297 -13 723 227 77 73 chr17 9385365 9385612 -76052868 + MIR SINE MIR 6 253 -9 1954 185 44 31 chr17 9386218 9386256 -76052224 - L1MB5 LINE L1 -1 6173 6137 2175 120 3 0 chr17 9386256 9386555 -76051925 - AluSq SINE Alu -13 300 1 1954 185 44 31 chr17 9386555 9386856 -76051624 - L1MB5 LINE L1 -37 6137 5824 1696 158 0 60 chr17 9386856 9387172 -76051308 - AluJb SINE Alu -15 297 1 1954 185 44 31 chr17 9387172 9387286 -76051194 - L1MB5 LINE L1 -350 5824 5713 415 234 90 0 chr17 9387625 9387736 -76050744 - MIR SINE MIR -54 208 88 606 273 52 5 chr17 9388400 9388594 -76049886 - MER63A DNA MER1_type 0 210 8 236 271 187 32 chr17 9388715 9388870 -76049610 - MIR3 SINE MIR -20 188 10 1418 255 46 26 chr17 9390874 9391333 -76047147 - Charlie4a DNA MER1_type -11 497 30 1752 154 0 20 chr17 9392418 9392711 -76045769 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr17 9392712 9392738 -76045742 + AT_rich Low_complexity Low_complexity 1 26 0 1990 136 0 7 chr17 9394363 9394657 -76043823 + AluSx SINE Alu 1 292 -20 312 355 47 6 chr17 9395473 9395645 -76042835 - MIR3 SINE MIR 0 208 30 2303 86 3 7 chr17 9396487 9396789 -76041691 - AluSq SINE Alu -12 301 1 229 283 166 28 chr17 9397869 9398014 -76040466 + MLT1J LTR MaLR 343 507 -4 269 301 0 0 chr17 9398413 9398516 -76039964 + (CA)n Simple_repeat Simple_repeat 2 104 0 228 371 9 9 chr17 9399056 9399172 -76039308 + MIR3 SINE MIR 86 201 -7 2055 170 20 59 chr17 9399890 9400296 -76038184 + MLT1B LTR MaLR 1 390 0 1010 76 0 0 chr17 9401771 9401902 -76036578 - AluSp/q SINE Alu -9 304 174 535 86 0 0 chr17 9401902 9401972 -76036508 - AluS SINE Alu -243 70 1 521 256 67 0 chr17 9401972 9402200 -76036280 - L1MC/D LINE L1 -758 5388 5199 2081 58 65 0 chr17 9402211 9402486 -76035994 - AluY SINE Alu -18 293 1 2231 102 3 0 chr17 9402514 9402818 -76035662 + AluSp SINE Alu 1 305 -8 405 336 108 9 chr17 9402910 9403234 -76035246 + L2 LINE L2 2859 3214 -99 291 28 0 0 chr17 9403804 9403840 -76034640 + (TG)n Simple_repeat Simple_repeat 2 37 0 459 281 105 7 chr17 9404389 9404542 -76033938 - MIR SINE MIR -1 261 94 2454 78 0 0 chr17 9404813 9405119 -76033361 - AluSx SINE Alu -6 306 1 382 264 47 0 chr17 9405456 9405562 -76032918 - MIR3 SINE MIR -6 202 92 2371 77 3 0 chr17 9406154 9406451 -76032029 - AluSp SINE Alu -15 298 1 25 0 0 0 chr17 9406454 9406479 -76032001 + AT_rich Low_complexity Low_complexity 1 25 0 999 171 11 23 chr17 9406639 9406815 -76031665 + MER5B DNA MER1_type 3 176 -2 2330 96 0 0 chr17 9408060 9408361 -76030119 + AluSx SINE Alu 1 301 -11 552 15 0 0 chr17 9408487 9408552 -76029928 + (TGG)n Simple_repeat Simple_repeat 2 66 0 580 140 13 140 chr17 9410132 9410236 -76028244 + MER45A DNA AcHobo 42 121 -1460 1943 108 0 37 chr17 9410236 9410531 -76027949 - AluSx SINE Alu 0 312 29 580 140 13 140 chr17 9410531 9410583 -76027897 + MER45A DNA AcHobo 121 178 0 399 41 0 0 chr17 9411175 9411224 -76027256 + (TG)n Simple_repeat Simple_repeat 2 50 0 342 0 0 0 chr17 9411516 9411554 -76026926 + (TG)n Simple_repeat Simple_repeat 2 39 0 1504 180 61 44 chr17 9412096 9412457 -76026023 + MLT1B LTR MaLR 19 385 -5 2171 111 0 3 chr17 9412897 9413204 -76025276 - AluSg SINE Alu -4 306 1 331 312 63 43 chr17 9413242 9413494 -76024986 + L2 LINE L2 2764 3034 -238 1734 157 0 17 chr17 9413722 9414031 -76024449 - AluJb SINE Alu 0 304 1 367 312 131 41 chr17 9414059 9414280 -76024200 - L1ME4a LINE L1 -55 6066 5826 1912 146 26 3 chr17 9414297 9414599 -76023881 + AluSx SINE Alu 1 309 -3 620 254 12 129 chr17 9414685 9414864 -76023616 - L1ME4a LINE L1 -369 5752 5554 2154 85 0 4 chr17 9414864 9415182 -76023298 - AluSg SINE Alu 0 317 1 620 254 12 129 chr17 9415182 9415514 -76022966 - L1ME4a LINE L1 -567 5554 5296 288 276 0 87 chr17 9415981 9416108 -76022372 - MIR SINE MIR -63 145 30 223 396 50 22 chr17 9417338 9417477 -76021003 - L2 LINE L2 -9 3263 3121 791 159 0 6 chr17 9417624 9417800 -76020680 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 266 284 0 0 chr17 9417800 9417867 -76020613 + (TAGG)n Simple_repeat Simple_repeat 2 68 0 1146 178 53 0 chr17 9418738 9418946 -76019534 + MER20 DNA MER1_type 1 219 0 2352 71 10 3 chr17 9419062 9419372 -76019108 + AluSp SINE Alu 2 313 0 193 303 160 8 chr17 9419394 9419513 -76018967 - L2 LINE L2 0 3272 3136 182 344 16 0 chr17 9419659 9419720 -76018760 - MER5A DNA MER1_type 0 189 128 438 269 0 37 chr17 9420355 9420463 -76018017 - L2 LINE L2 -7 3265 3162 1776 108 0 8 chr17 9421239 9421488 -76016992 - AluSx SINE Alu -16 296 50 1594 113 0 9 chr17 9421488 9421715 -76016765 - AluSc SINE Alu -82 227 1 506 294 43 16 chr17 9421782 9421969 -76016511 + MIR3 SINE MIR 15 206 -2 647 120 0 0 chr17 9422440 9422540 -76015940 - LTR12 LTR ERV1 0 714 615 296 261 11 0 chr17 9422542 9422634 -76015846 - LTR30 LTR ERV1 -79 643 551 263 182 91 15 chr17 9422645 9422711 -76015769 - LTR12 LTR ERV1 -439 275 205 1026 142 122 5 chr17 9422754 9422959 -76015521 - LTR12 LTR ERV1 -484 230 2 2087 135 0 3 chr17 9424470 9424782 -76013698 - AluSq SINE Alu -2 311 1 923 119 8 0 chr17 9424782 9424916 -76013564 - AluSq/x SINE Alu -178 135 1 432 156 104 0 chr17 9426081 9426177 -76012303 + MER53 DNA DNA 1 106 -83 342 305 156 32 chr17 9426953 9427107 -76011373 + L3 LINE CR1 1394 1566 -11 1939 57 4 38 chr17 9427179 9427441 -76011039 - AluY SINE Alu -21 290 38 2314 85 3 3 chr17 9428762 9429067 -76009413 - AluSx SINE Alu -7 305 1 186 279 49 90 chr17 9429963 9430085 -76008395 + MIR SINE MIR 31 147 -61 402 255 56 43 chr17 9430175 9430336 -76008144 + MIR SINE MIR 2 164 -98 2250 101 3 0 chr17 9430506 9430803 -76007677 + AluSq SINE Alu 1 298 -15 182 337 158 0 chr17 9430854 9430949 -76007531 + MIR3 SINE MIR 86 195 -13 340 278 16 16 chr17 9431625 9431751 -76006729 + L2 LINE L2 2996 3121 -192 447 241 35 47 chr17 9431888 9432058 -76006422 + L2 LINE L2 3146 3313 0 952 306 129 66 chr17 9432078 9432386 -76006094 + L2 LINE L2 1290 1577 -1737 2182 111 0 46 chr17 9432386 9432562 -76005918 - AluSx SINE Alu -3 309 153 1606 52 61 5 chr17 9432562 9432775 -76005705 - AluSg/x SINE Alu -17 293 69 2182 111 0 46 chr17 9432775 9432922 -76005558 - AluSx SINE Alu -159 153 1 952 306 129 66 chr17 9432922 9433847 -76004633 + L2 LINE L2 1577 2601 -713 238 376 11 34 chr17 9433867 9434045 -76004435 - L1MEd LINE L1 -5604 515 342 351 261 124 0 chr17 9434588 9434749 -76003731 - MER112 DNA MER1_type -12 248 68 619 141 27 13 chr17 9434752 9434901 -76003579 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 206 398 11 0 chr17 9435026 9435119 -76003361 + L2 LINE L2 3204 3297 -16 2357 83 0 3 chr17 9436890 9437191 -76001289 - AluSx SINE Alu -12 300 1 532 332 58 40 chr17 9437349 9437677 -76000803 - L2 LINE L2 -4 3268 2935 2359 95 0 9 chr17 9438095 9438410 -76000070 - AluSx SINE Alu 0 312 1 206 281 0 31 chr17 9438848 9438912 -75999568 - MIR SINE MIR -124 84 23 522 245 82 27 chr17 9440079 9440226 -75998254 - MER5B DNA MER1_type -3 175 21 2275 96 3 3 chr17 9440499 9440802 -75997678 + AluSg SINE Alu 1 303 -7 2077 97 10 48 chr17 9440802 9441113 -75997367 + AluSc SINE Alu 1 299 -10 2116 125 3 0 chr17 9441810 9442107 -75996373 - AluSp SINE Alu -15 298 1 219 278 77 102 chr17 9442132 9442579 -75995901 - L2 LINE L2 -8 3264 2771 1340 119 4 44 chr17 9442674 9442901 -75995579 + AluY SINE Alu 87 304 -7 1321 148 0 5 chr17 9442909 9443118 -75995362 + AluSg/x SINE Alu 92 299 -13 216 0 0 0 chr17 9443243 9443267 -75995213 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 982 278 78 38 chr17 9443268 9443668 -75994812 - L2 LINE L2 -14 3299 2884 2343 48 7 7 chr17 9444129 9444424 -75994056 + AluY SINE Alu 1 295 -16 318 337 116 32 chr17 9444459 9444649 -75993831 + L3 LINE CR1 1037 1242 -335 1172 106 0 0 chr17 9444703 9444864 -75993616 + AluSq SINE Alu 152 312 -1 355 312 100 48 chr17 9444875 9445106 -75993374 + L3 LINE CR1 1333 1575 -2 231 36 0 0 chr17 9445123 9445151 -75993329 + (CCTG)n Simple_repeat Simple_repeat 3 30 0 231 152 0 0 chr17 9445153 9445199 -75993281 + CT-rich Low_complexity Low_complexity 4 49 0 2483 213 77 25 chr17 9445250 9445659 -75992821 - L1ME2 LINE L1 -117 6116 5730 1782 112 44 20 chr17 9445659 9445954 -75992526 + AluSx SINE Alu 1 302 -10 2483 213 77 25 chr17 9445954 9446400 -75992080 - L1ME2 LINE L1 -503 5730 5214 240 378 150 0 chr17 9446459 9446586 -75991894 + L3 LINE CR1 1038 1183 -394 2052 218 48 155 chr17 9446586 9446901 -75991579 - L1ME2 LINE L1 -992 5223 4876 225 0 0 0 chr17 9446901 9446926 -75991554 + (CA)n Simple_repeat Simple_repeat 2 26 0 2052 218 48 155 chr17 9446926 9447045 -75991435 - L1ME2 LINE L1 -1339 4876 4746 2150 71 3 11 chr17 9447045 9447364 -75991116 - AluY SINE Alu 0 317 1 2052 218 48 155 chr17 9447364 9448366 -75990114 - L1ME2 LINE L1 -1469 4746 3939 577 254 46 0 chr17 9448366 9448472 -75990008 - L1ME2 LINE L1 -3089 3126 3026 1637 191 32 61 chr17 9448472 9448848 -75989632 - MLT1A1 LTR MaLR 0 365 1 577 254 46 0 chr17 9448848 9448938 -75989542 - L1ME2 LINE L1 -3189 3026 2921 399 196 21 21 chr17 9448966 9449063 -75989417 - L1ME2 LINE L1 -3732 2483 2387 347 250 61 86 chr17 9449079 9449136 -75989344 - L1ME2 LINE L1 -4037 2359 2302 1283 7 7 13 chr17 9449136 9449289 -75989191 + L1PA6 LINE L1 6003 6154 0 347 250 61 86 chr17 9449289 9449511 -75988969 - L1ME2 LINE L1 -4094 2302 2087 246 32 0 0 chr17 9449522 9449553 -75988927 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 0 0 0 chr17 9449721 9449743 -75988737 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2087 86 0 0 chr17 9449752 9450021 -75988459 - AluSg SINE Alu -31 279 11 189 352 0 0 chr17 9450060 9450114 -75988366 - L2 LINE L2 -31 3241 3188 247 274 162 17 chr17 9450240 9450357 -75988123 + L2 LINE L2 2925 3058 -214 1115 162 56 20 chr17 9450491 9450688 -75987792 - Tigger3(Golem) DNA MER2_type -1 3028 2825 734 208 11 71 chr17 9451029 9451094 -75987386 - MIR SINE MIR 0 262 195 2249 92 0 0 chr17 9451094 9451389 -75987091 - AluSq SINE Alu -18 295 1 734 208 11 71 chr17 9451389 9451506 -75986974 - MIR SINE MIR -67 195 91 2284 100 0 0 chr17 9452296 9452607 -75985873 - AluSq SINE Alu -1 312 2 1001 279 118 0 chr17 9452783 9453181 -75985299 + LTR16A LTR ERVL 1 445 -5 195 42 0 0 chr17 9453559 9453583 -75984897 + (CA)n Simple_repeat Simple_repeat 1 24 0 2336 71 0 23 chr17 9454922 9455231 -75983249 - AluY SINE Alu -9 302 1 722 82 20 0 chr17 9455231 9455329 -75983151 - AluSg/x SINE Alu -8 302 203 2306 74 7 3 chr17 9455350 9455649 -75982831 - AluSg SINE Alu -10 300 1 2268 173 44 22 chr17 9455652 9456101 -75982379 + MER68 LTR ERV1 34 492 -70 473 255 0 0 chr17 9456101 9456195 -75982285 + MER82 DNA MER2_type 1 94 -559 366 338 32 6 chr17 9456233 9456390 -75982090 - MIR SINE MIR -73 189 29 690 287 12 0 chr17 9456415 9456582 -75981898 + MER82 DNA MER2_type 447 615 -38 470 154 0 26 chr17 9456568 9456646 -75981834 + MER68 LTR ERV1 480 555 -7 * 1964 86 93 7 chr17 9457236 9457516 -75980964 - AluSq SINE Alu -9 304 1 1967 142 15 9 chr17 9457591 9457929 -75980551 + MER2 DNA MER2_type 2 341 -3 1002 200 45 155 chr17 9457933 9458313 -75980167 + MER21B LTR ERV1 15 352 -511 642 234 78 73 chr17 9458362 9458567 -75979913 + MER21B LTR ERV1 364 569 -294 1132 89 0 0 chr17 9458571 9458717 -75979763 - AluSg/x SINE Alu -13 299 154 647 240 58 23 chr17 9458717 9458888 -75979592 - MER21B LTR ERV1 -126 737 561 2177 101 0 3 chr17 9458888 9459194 -75979286 + AluSg SINE Alu 1 305 -5 2116 108 0 0 chr17 9460096 9460392 -75978088 + AluSg SINE Alu 1 296 -14 529 319 37 61 chr17 9460447 9460516 -75977964 + HAL1 LINE L1 811 880 -1627 1893 140 45 72 chr17 9460516 9460639 -75977841 - MLT1B LTR MaLR 0 390 265 2332 100 0 0 chr17 9460639 9460950 -75977530 - AluSx SINE Alu -1 311 1 1893 140 45 72 chr17 9460950 9461045 -75977435 - MLT1B LTR MaLR -125 265 169 1724 168 0 39 chr17 9461045 9461355 -75977125 - AluJb SINE Alu -14 298 1 1893 140 45 72 chr17 9461355 9461536 -75976944 - MLT1B LTR MaLR -221 169 1 529 319 37 61 chr17 9461536 9461792 -75976688 + HAL1 LINE L1 880 1128 -1379 356 302 86 40 chr17 9462097 9462319 -75976161 - L1MEd LINE L1 -5779 340 109 2266 87 0 0 chr17 9462334 9462632 -75975848 - AluSx SINE Alu -14 298 1 463 311 64 43 chr17 9463043 9463323 -75975157 + L2 LINE L2 3027 3312 -1 421 165 59 24 chr17 9463414 9463448 -75975032 + (TA)n Simple_repeat Simple_repeat 2 33 -144 1955 100 0 0 chr17 9463448 9463708 -75974772 + AluSx SINE Alu 1 260 -52 421 165 59 24 chr17 9463708 9463843 -75974637 + (TA)n Simple_repeat Simple_repeat 33 177 0 519 332 47 64 chr17 9464018 9464485 -75973995 + L2 LINE L2 2813 3271 -1 2085 92 3 3 chr17 9465071 9465380 -75973100 - AluY SINE Alu 0 309 1 2264 146 6 0 chr17 9465848 9466183 -75972297 + MER1B DNA MER1_type 1 337 0 905 190 0 0 chr17 9466223 9466381 -75972099 + FAM SINE Alu 1 158 -17 225 214 12 71 chr17 9466404 9466488 -75971992 + MER113 DNA MER1_type? 1 79 -442 2123 102 0 0 chr17 9466844 9467139 -75971341 + AluSp SINE Alu 16 310 -3 1773 214 70 37 chr17 9467253 9467739 -75970741 - MLT1D LTR MaLR -2 503 2 387 298 171 10 chr17 9468344 9468549 -75969931 - L2 LINE L2 0 3313 3076 2045 111 0 36 chr17 9468731 9469037 -75969443 + AluSx SINE Alu 1 295 -17 685 236 0 0 chr17 9469205 9469332 -75969148 + FLAM_A SINE Alu 1 127 -15 215 325 95 8 chr17 9469334 9469460 -75969020 - L2 LINE L2 -594 2720 2584 2173 102 3 0 chr17 9520071 9520365 -75918115 - AluSq SINE Alu -18 295 1 487 171 0 34 chr17 9520951 9521126 -75917354 + G-rich Low_complexity Low_complexity 1 169 0 432 300 38 33 chr17 9521307 9521517 -75916963 - MLT1K LTR MaLR -121 467 257 320 263 118 33 chr17 9521561 9521713 -75916767 - MLT1K LTR MaLR -411 177 13 278 326 50 35 chr17 9521803 9521944 -75916536 - MIR SINE MIR -65 197 55 802 306 60 16 chr17 9522368 9522751 -75915729 + LTR16C LTR ERVL 90 489 -2 1771 87 76 11 chr17 9523608 9523900 -75914580 + AluSg SINE Alu 1 309 0 2043 102 16 13 chr17 9524061 9524364 -75914116 + AluSx SINE Alu 1 304 -8 2263 86 7 0 chr17 9525047 9525350 -75913130 + AluSx SINE Alu 1 305 -7 1263 100 0 0 chr17 9525355 9525525 -75912955 + AluSg/x SINE Alu 121 290 -20 183 245 82 0 chr17 9526314 9526363 -75912117 + MIR SINE MIR 32 84 -124 214 300 20 0 chr17 9526375 9526425 -75912055 + MIR SINE MIR 3 53 -209 1964 87 20 17 chr17 9526578 9526876 -75911604 + AluSg SINE Alu 1 299 -11 678 258 146 0 chr17 9527019 9527232 -75911248 + MIR SINE MIR 19 262 0 188 176 27 162 chr17 9527252 9527289 -75911191 + MIR3 SINE MIR 124 148 -60 365 263 26 105 chr17 9527289 9527479 -75911001 + MER5B DNA MER1_type 1 175 -3 188 176 27 162 chr17 9527479 9527515 -75910965 + MIR3 SINE MIR 148 187 -21 3054 170 40 16 chr17 9527616 9528198 -75910282 - L1MB5 LINE L1 -6 6168 5573 566 165 19 10 chr17 9529232 9529335 -75909145 + MIR SINE MIR 1 104 -158 2011 115 0 7 chr17 9529713 9530020 -75908460 - AluSx SINE Alu 0 305 1 847 271 24 5 chr17 9530500 9530710 -75907770 - MIR SINE MIR -21 241 28 223 299 47 9 chr17 9530747 9530854 -75907626 + L3 LINE CR1 1143 1253 -324 333 306 69 28 chr17 9531141 9531285 -75907195 - L1ME3 LINE L1 -22 6140 5991 2083 73 62 3 chr17 9531698 9531987 -75906493 - AluSc SINE Alu -3 306 1 216 0 0 0 chr17 9532547 9532571 -75905909 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1732 149 0 11 chr17 9532571 9532852 -75905628 - AluJo SINE Alu -34 278 1 1272 38 0 6 chr17 9532864 9533022 -75905458 - AluY SINE Alu -4 307 151 1645 113 4 4 chr17 9533831 9534069 -75904411 - AluSq SINE Alu -41 272 35 912 155 16 36 chr17 9534145 9534338 -75904142 + MER53 DNA DNA 1 189 0 2218 105 3 0 chr17 9534857 9535161 -75903319 - AluSq SINE Alu -8 305 1 260 297 55 0 chr17 9535321 9535412 -75903068 + L1ME4a LINE L1 5596 5691 -430 243 252 0 54 chr17 9535551 9535662 -75902818 + L1ME4a LINE L1 5946 6050 -71 2044 114 7 0 chr17 9535806 9536113 -75902367 + AluY SINE Alu 1 309 -2 726 173 47 0 chr17 9536235 9536362 -75902118 - FLAM_C SINE Alu 0 133 1 291 253 114 0 chr17 9536637 9536716 -75901764 - L1P LINE L1 -1979 4167 4080 621 178 48 7 chr17 9537039 9537185 -75901295 + AluSg/x SINE Alu 70 221 -91 515 204 0 0 chr17 9537806 9537894 -75900586 + L2 LINE L2 3225 3312 -1 2193 113 37 53 chr17 9539306 9539346 -75899134 - THE1C LTR MaLR -1 374 335 2007 127 23 0 chr17 9539346 9539645 -75898835 + AluSx SINE Alu 1 306 -6 2193 113 37 53 chr17 9539645 9539984 -75898496 - THE1C LTR MaLR -40 335 1 304 299 21 21 chr17 9540529 9540626 -75897854 - MIR SINE MIR -147 115 19 234 231 39 13 chr17 9540694 9540772 -75897708 + L1ME4a LINE L1 5969 6048 -73 719 247 88 24 chr17 9540792 9541166 -75897314 - MLT1K LTR MaLR -4 584 149 262 225 132 70 chr17 9541458 9541587 -75896893 - MIR SINE MIR -105 157 21 397 197 0 0 chr17 9541855 9541921 -75896559 - MIR SINE MIR -149 113 48 541 187 57 167 chr17 9541938 9542184 -75896296 - MER20 DNA MER1_type 0 219 1 2163 107 0 0 chr17 9542279 9542570 -75895910 - AluSg SINE Alu -19 291 1 394 311 185 8 chr17 9542601 9542861 -75895619 + L2 LINE L2 2617 2922 -392 1856 140 7 10 chr17 9543466 9543773 -75894707 - AluJo SINE Alu 0 312 7 225 325 8 17 chr17 9544001 9544121 -75894359 - LTR67 LTR ERVL -11 546 428 196 304 72 14 chr17 9544873 9544942 -75893538 - MIR SINE MIR 0 262 190 2206 111 0 0 chr17 9544942 9545239 -75893241 - AluSx SINE Alu -15 297 1 437 237 9 26 chr17 9545243 9545357 -75893123 - MIR SINE MIR -54 208 97 2190 110 0 0 chr17 9545419 9545719 -75892761 - AluSx SINE Alu -12 300 1 2079 104 0 3 chr17 9545729 9546046 -75892434 - AluSq SINE Alu 0 316 1 283 232 71 18 chr17 9546263 9546375 -75892105 - L1MC4 LINE L1 -1 8041 7924 450 220 68 8 chr17 9546605 9546723 -75891757 + MER106A DNA MER1_type 112 236 0 2439 60 0 0 chr17 9546758 9547058 -75891422 - AluY SINE Alu -11 300 1 1699 227 42 34 chr17 9547330 9547397 -75891083 + MLT1D LTR MaLR 1 66 -439 2476 124 13 5 chr17 9547397 9547769 -75890711 - THE1C LTR MaLR 0 375 1 1699 227 42 34 chr17 9547769 9548195 -75890285 + MLT1D LTR MaLR 66 498 -7 1123 120 12 132 chr17 9549285 9549543 -75888937 + AluJb SINE Alu 86 312 0 270 193 0 0 chr17 9549886 9549943 -75888537 + (TG)n Simple_repeat Simple_repeat 2 58 0 181 133 67 0 chr17 9550059 9550089 -75888391 - MIR SINE MIR -176 86 55 2084 102 0 33 chr17 9550961 9551265 -75887215 - AluSg SINE Alu -16 294 1 645 299 101 50 chr17 9551597 9552161 -75886319 - L2 LINE L2 -2 3311 2677 2207 107 0 0 chr17 9552161 9552460 -75886020 - AluSx SINE Alu -13 299 1 645 299 101 50 chr17 9552460 9552633 -75885847 - L2 LINE L2 -636 2677 2514 237 266 18 101 chr17 9552772 9552881 -75885599 - L2 LINE L2 -170 3102 3003 189 0 0 0 chr17 9553401 9553422 -75885058 + (TG)n Simple_repeat Simple_repeat 1 21 0 2140 108 3 9 chr17 9554103 9554418 -75884062 - AluSq SINE Alu 0 313 1 16150 18 0 0 chr17 9555135 9557731 -75880749 + L1HS LINE L1 3544 6139 -16 183 42 0 0 chr17 9557731 9557755 -75880725 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 1220 189 59 42 chr17 9557995 9558302 -75880178 + AluJo SINE Alu 1 312 0 277 242 15 0 chr17 9558348 9558414 -75880066 - HAL1 LINE L1 -854 1653 1587 643 227 138 32 chr17 9558418 9558665 -75879815 - L1ME3A LINE L1 -1 6169 5897 1439 240 60 0 chr17 9558705 9559185 -75879295 - L1ME LINE L1 -3523 2557 2049 281 261 63 59 chr17 9559158 9559396 -75879084 - L1ME LINE L1 -4308 1772 1534 * 282 29 0 0 chr17 9559396 9559431 -75879049 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 847 204 6 0 chr17 9559431 9559588 -75878892 - FAM SINE Alu -26 159 2 1073 265 106 55 chr17 9559629 9560742 -75877738 - L1ME LINE L1 -4689 1393 321 251 350 12 25 chr17 9560985 9561145 -75877335 - L1ME LINE L1 -5625 445 288 240 331 36 55 chr17 9561185 9561547 -75876933 - L1ME LINE L1 -5665 405 51 2088 125 0 0 chr17 9561964 9562259 -75876221 - AluSq SINE Alu -18 295 1 21 57 0 0 chr17 9562379 9562414 -75876066 + AT_rich Low_complexity Low_complexity 1 35 0 1976 108 21 4 chr17 9562957 9563269 -75875211 + AluSx SINE Alu 1 317 0 356 212 35 0 chr17 9563347 9563432 -75875048 + L1MA10 LINE L1 6234 6321 -13 195 42 0 0 chr17 9563436 9563460 -75875020 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1534 157 3 45 chr17 9563477 9563763 -75874717 - AluJo SINE Alu -38 274 1 2219 91 3 0 chr17 9564008 9564304 -75874176 - AluSg SINE Alu -13 297 1 422 48 24 48 chr17 9565189 9565273 -75873207 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 1914 94 0 123 chr17 9565275 9565617 -75872863 - AluSq SINE Alu -3 300 1 1932 90 0 125 chr17 9566025 9566454 -75872026 + AluSq SINE Alu 1 386 0 2228 91 3 0 chr17 9567339 9567636 -75870844 + AluSg SINE Alu 1 298 -12 1579 157 0 45 chr17 9567882 9568169 -75870311 + AluJo SINE Alu 1 274 -38 195 42 0 0 chr17 9568186 9568210 -75870270 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 356 212 35 0 chr17 9568214 9568299 -75870181 - L1MA10 LINE L1 -13 6321 6234 1685 134 21 18 chr17 9568377 9568693 -75869787 - AluSx SINE Alu 0 317 1 1446 161 3 77 chr17 9568698 9569008 -75869472 - AluJo SINE Alu -12 300 14 806 244 104 37 chr17 9569027 9569355 -75869125 - L2 LINE L2 -569 2745 2396 1977 122 3 7 chr17 9569837 9570124 -75868356 - AluSx SINE Alu -26 286 1 2157 66 0 26 chr17 9570295 9570597 -75867883 - AluY SINE Alu -13 298 5 272 222 79 0 chr17 9570913 9570976 -75867504 + MER20B DNA MER1_type 516 583 -200 543 94 0 28 chr17 9570984 9571223 -75867257 + AluSx SINE Alu 1 292 -18 1191 119 0 0 chr17 9571223 9571391 -75867089 + AluSg/x SINE Alu 121 288 -24 644 213 52 6 chr17 9571411 9571585 -75866895 + MER20B DNA MER1_type 602 783 0 2146 91 0 3 chr17 9572512 9572882 -75865598 + AluSq SINE Alu 1 369 0 2249 85 0 0 chr17 9573387 9573692 -75864788 + AluSg SINE Alu 2 306 -4 400 253 63 11 chr17 9573769 9573864 -75864616 - MER5A DNA MER1_type -83 106 7 1793 108 0 4 chr17 9574248 9574497 -75863983 - AluSx SINE Alu -64 248 1 533 309 64 16 chr17 9575381 9575630 -75862850 + MIR SINE MIR 2 262 0 2059 124 0 3 chr17 9575769 9576067 -75862413 + AluSx SINE Alu 1 297 -15 318 296 77 61 chr17 9576250 9576547 -75861933 - L2 LINE L2 -130 3183 2882 3190 81 17 52 chr17 9576853 9577255 -75861225 - L1PA11 LINE L1 0 6174 5790 1779 155 0 32 chr17 9577255 9577565 -75860915 - AluSx SINE Alu -12 300 1 3190 81 17 52 chr17 9577565 9577644 -75860836 - L1PA11 LINE L1 -384 5790 5710 2014 104 14 0 chr17 9578963 9579271 -75859209 + AluSx SINE Alu 1 312 0 627 222 120 19 chr17 9579309 9579525 -75858955 + L1ME4a LINE L1 5882 6119 -2 404 281 67 15 chr17 9580239 9580374 -75858106 + MIR SINE MIR 87 228 -34 1979 65 59 52 chr17 9580720 9581026 -75857454 - AluSq SINE Alu -5 308 1 25 0 0 0 chr17 9582295 9582320 -75856160 + GC_rich Low_complexity Low_complexity 1 25 0 333 286 157 19 chr17 9583114 9583378 -75855102 - L2 LINE L2 -212 3060 2763 336 102 0 0 chr17 9583683 9583732 -75854748 + (A)n Simple_repeat Simple_repeat 1 49 0 640 182 297 21 chr17 9584006 9584198 -75854282 + MIR SINE MIR 2 246 -16 2368 49 0 52 chr17 9584344 9584671 -75853809 + AluY SINE Alu 1 310 -1 336 252 104 109 chr17 9584943 9585336 -75853144 - L2 LINE L2 -3 3310 2920 603 201 0 0 chr17 9585457 9585591 -75852889 + CT-rich Low_complexity Low_complexity 2 135 0 682 229 0 0 chr17 9585602 9585733 -75852747 - AluJo/FRAM SINE Alu -3 309 179 1557 101 0 0 chr17 9585734 9585943 -75852537 + AluSg/x SINE Alu 90 298 -14 1440 181 4 11 chr17 9585985 9586262 -75852218 - L1PA16 LINE L1 0 6166 5892 365 279 85 23 chr17 9586264 9586393 -75852087 - L1ME4a LINE L1 -4 6117 5981 300 258 141 31 chr17 9586421 9586584 -75851896 - L1ME4a LINE L1 -222 5899 5719 292 253 192 0 chr17 9586640 9586739 -75851741 + L1P LINE L1 4050 4167 -1979 * 318 265 61 30 chr17 9586738 9586870 -75851610 - L1ME4a LINE L1 -384 5737 5602 373 300 1 3 chr17 9586889 9587002 -75851478 - L1ME2 LINE L1 -2 6332 6059 1538 129 53 4 chr17 9587045 9587308 -75851172 - AluSx SINE Alu -36 276 1 538 170 86 0 chr17 9587309 9587424 -75851056 - L1MA8 LINE L1 -118 6173 6050 1242 144 36 0 chr17 9587464 9587658 -75850822 - L1PB1 LINE L1 -7 6144 5944 308 280 11 11 chr17 9587695 9587788 -75850692 - L1ME4a LINE L1 -693 5428 5336 2216 101 0 13 chr17 9587793 9588109 -75850371 - AluSx SINE Alu 0 312 1 503 308 64 20 chr17 9588992 9589242 -75849238 + MIR SINE MIR 2 262 0 2044 128 0 3 chr17 9589381 9589679 -75848801 + AluSx SINE Alu 1 297 -15 324 297 78 57 chr17 9589862 9590158 -75848322 - L2 LINE L2 -130 3183 2882 284 186 16 85 chr17 9590538 9590560 -75847920 + G-rich Low_complexity Low_complexity 6 28 -152 191 61 30 0 chr17 9590560 9590593 -75847887 + (TGGG)n Simple_repeat Simple_repeat 2 35 0 284 186 16 85 chr17 9590593 9590758 -75847722 + G-rich Low_complexity Low_complexity 28 180 0 * 291 228 30 42 chr17 9590621 9590788 -75847692 + (GGGTG)n Simple_repeat Simple_repeat 2 166 0 201 74 0 0 chr17 9591017 9591044 -75847436 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 380 336 91 16 chr17 9591044 9591473 -75847007 + HAL1 LINE L1 1153 1613 -894 316 291 77 50 chr17 9592014 9592234 -75846246 + L1MEc LINE L1 2161 2386 -4010 314 324 32 46 chr17 9592291 9592513 -75845967 + L1MEc LINE L1 2384 2599 -3616 1945 95 16 54 chr17 9592513 9592828 -75845652 + AluSq SINE Alu 1 303 -10 314 324 32 46 chr17 9592828 9593040 -75845440 + L1MEc LINE L1 2599 2812 -3403 288 86 0 0 chr17 9593054 9593089 -75845391 + tRNA-Trp tRNA tRNA 1 35 -40 357 276 98 0 chr17 9593181 9593304 -75845176 + L1MEc LINE L1 2943 3077 -3138 426 243 86 21 chr17 9593307 9593447 -75845033 + MER69 DNA AcHobo 1 149 -1077 401 255 23 42 chr17 9593623 9593762 -75844718 - MER20B DNA MER1_type -21 198 58 2236 88 3 0 chr17 9593762 9594057 -75844423 + AluSp SINE Alu 1 296 -17 1879 134 15 0 chr17 9594198 9594467 -75844013 - AluSx SINE Alu 0 312 40 2068 146 0 0 chr17 9594470 9594764 -75843716 - AluSx SINE Alu -17 295 2 1122 128 0 0 chr17 9595412 9595568 -75842912 - AluSp SINE Alu -21 292 137 2448 87 3 0 chr17 9595684 9595983 -75842497 - AluSp SINE Alu -5 308 9 2501 167 120 38 chr17 9596241 9596454 -75842026 - MER6A DNA MER2_type -261 604 410 2467 68 0 3 chr17 9596454 9596748 -75841732 + AluSc SINE Alu 1 293 -16 2501 167 120 38 chr17 9596748 9597092 -75841388 - MER6A DNA MER2_type -455 410 1 288 0 0 0 chr17 9597157 9597189 -75841291 + (CA)n Simple_repeat Simple_repeat 2 33 0 486 264 8 0 chr17 9597189 9597314 -75841166 + L1ME LINE L1 5617 5742 -428 2233 87 0 71 chr17 9597372 9597694 -75840786 - AluSg SINE Alu -11 299 1 216 0 0 0 chr17 9598255 9598279 -75840201 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1846 149 0 11 chr17 9598279 9598560 -75839920 - AluJo SINE Alu -34 278 1 1342 38 0 6 chr17 9598572 9598730 -75839750 - AluY SINE Alu -4 307 151 973 145 11 32 chr17 9599604 9599790 -75838690 - MER5A DNA MER1_type -6 183 2 401 46 81 46 chr17 9600041 9600214 -75838266 + (TA)n Simple_repeat Simple_repeat 2 180 0 464 75 69 29 chr17 9600229 9600402 -75838078 + (TA)n Simple_repeat Simple_repeat 1 180 0 2343 77 0 74 chr17 9600553 9600890 -75837590 - AluSx SINE Alu 0 312 1 2183 104 0 0 chr17 9601398 9601687 -75836793 + AluSq SINE Alu 18 306 -7 338 274 18 26 chr17 9601721 9601834 -75836646 + L2 LINE L2 3200 3311 -2 1365 208 46 14 chr17 9603368 9603715 -75834765 - MLT1A1 LTR MaLR -7 358 1 2024 90 4 22 chr17 9603949 9604216 -75834264 - AluSg SINE Alu -10 300 39 262 109 0 22 chr17 9604438 9604484 -75833996 + MADE1 DNA Mariner 2 46 -34 415 267 0 0 chr17 9604780 9604885 -75833595 + L2 LINE L2 3161 3265 -7 23 0 0 0 chr17 9606085 9606108 -75832372 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr17 9606529 9606559 -75831921 + AT_rich Low_complexity Low_complexity 1 30 0 195 42 0 0 chr17 9607097 9607121 -75831359 + (A)n Simple_repeat Simple_repeat 1 24 0 2266 100 7 3 chr17 9607217 9607518 -75830962 + AluSx SINE Alu 1 302 -10 2439 164 55 49 chr17 9608513 9608799 -75829681 - LTR22 LTR ERVK 0 509 217 1828 88 32 0 chr17 9608799 9609049 -75829431 + L1PA6 LINE L1 5891 6148 -6 2439 164 55 49 chr17 9609049 9609268 -75829212 - LTR22 LTR ERVK -292 217 1 4042 36 13 2 chr17 9609659 9610135 -75828345 + L1PA3 LINE L1 5672 6152 -3 1105 190 43 9 chr17 9610162 9610394 -75828086 - MIR SINE MIR -10 252 13 837 282 115 18 chr17 9610416 9610746 -75827734 - HERVL LTR ERVL -3035 2619 2258 2490 60 0 17 chr17 9610895 9611197 -75827283 - AluY SINE Alu -14 297 1 446 314 49 20 chr17 9611332 9611714 -75826766 - HERVL LTR ERVL -3544 2220 1763 2193 117 0 10 chr17 9611786 9612095 -75826385 + AluSp SINE Alu 1 306 -7 1821 139 3 24 chr17 9612338 9612652 -75825828 - AluJo SINE Alu 0 308 1 2193 127 0 0 chr17 9613040 9613347 -75825133 - AluSx SINE Alu -5 307 1 236 200 19 133 chr17 9613746 9613851 -75824629 - L1M4 LINE L1 -854 5292 5200 465 216 32 0 chr17 9613861 9613986 -75824494 - L1M4 LINE L1 -912 5234 5106 * 1272 250 71 47 chr17 9613966 9614364 -75824116 - L1M4 LINE L1 -2717 3429 3013 2243 101 19 7 chr17 9614364 9614543 -75823937 - AluSq SINE Alu -1 312 126 192 40 0 0 chr17 9614543 9614568 -75823912 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2243 101 19 7 chr17 9614568 9614696 -75823784 - AluSq SINE Alu -187 126 1 1272 250 71 47 chr17 9614696 9614845 -75823635 - L1M4 LINE L1 -3133 3013 2869 2065 126 0 0 chr17 9615229 9615523 -75822957 - AluSx SINE Alu -18 294 1 194 350 41 10 chr17 9615648 9615745 -75822735 + MIR SINE MIR 47 146 -116 335 241 58 0 chr17 9615750 9615837 -75822643 - MER63 DNA MER1_type 0 1060 969 * 465 186 137 0 chr17 9615822 9615924 -75822556 - MER63 DNA MER1_type -93 743 2 305 303 87 16 chr17 9616001 9616186 -75822294 + MIR SINE MIR 9 206 -56 2331 84 0 7 chr17 9616271 9616568 -75821912 + AluSx SINE Alu 1 295 -17 409 280 63 0 chr17 9616729 9616872 -75821608 - MIR SINE MIR -6 256 105 369 130 0 0 chr17 9616889 9616943 -75821537 + MER116 DNA Mariner 27 80 0 2190 134 0 0 chr17 9617053 9617360 -75821120 - AluSq SINE Alu -6 307 1 1499 174 4 0 chr17 9617483 9617736 -75820744 + L1PA16 LINE L1 5791 6044 -122 472 206 11 0 chr17 9617823 9617915 -75820565 + L1PB4 LINE L1 6050 6142 -14 1864 137 4 11 chr17 9617960 9618237 -75820243 + AluSx SINE Alu 1 275 -37 2183 98 17 3 chr17 9618690 9618977 -75819503 - AluY SINE Alu -20 291 1 1716 181 0 26 chr17 9619167 9619471 -75819009 - AluJb SINE Alu -16 296 1 2418 79 3 0 chr17 9619882 9620174 -75818306 - AluSg SINE Alu -17 293 1 268 278 79 63 chr17 9620493 9620619 -75817861 + MIR SINE MIR 19 146 -62 345 314 208 0 chr17 9620656 9620863 -75817617 + MIR SINE MIR 13 262 0 1520 195 182 90 chr17 9621235 9621395 -75817085 - LTR41 LTR ERVL -6 767 623 1780 122 107 7 chr17 9621395 9621666 -75816814 + AluSq SINE Alu 1 298 -15 1520 195 182 90 chr17 9621666 9622152 -75816328 - LTR41 LTR ERVL -150 623 61 2269 105 0 16 chr17 9622166 9622481 -75815999 - AluSg SINE Alu 0 310 1 324 164 96 14 chr17 9622481 9622554 -75815926 - LTR41 LTR ERVL -694 79 1 23 0 0 0 chr17 9623218 9623241 -75815239 + AT_rich Low_complexity Low_complexity 1 23 0 2177 103 4 0 chr17 9623241 9623522 -75814958 - AluSx SINE Alu -27 285 4 2063 133 0 20 chr17 9624017 9624319 -75814161 + AluSx SINE Alu 1 296 -16 26 30 0 0 chr17 9625230 9625263 -75813217 + AT_rich Low_complexity Low_complexity 1 33 0 1815 117 8 11 chr17 9625630 9625896 -75812584 + AluSg SINE Alu 45 309 -1 25 0 0 0 chr17 9625991 9626016 -75812464 + AT_rich Low_complexity Low_complexity 1 25 0 227 283 139 53 chr17 9626108 9626217 -75812263 + L1ME3 LINE L1 5276 5374 -747 2548 63 3 0 chr17 9626217 9626517 -75811963 + AluSp SINE Alu 6 306 -7 227 283 139 53 chr17 9626517 9626860 -75811620 + L1ME3 LINE L1 5374 5794 -327 6470 103 32 15 chr17 9627406 9628408 -75810072 - L1MA5 LINE L1 -2 6298 5280 291 203 0 0 chr17 9628647 9628711 -75809769 + (TG)n Simple_repeat Simple_repeat 2 65 0 2514 55 0 10 chr17 9629708 9630018 -75808462 - AluY SINE Alu -4 307 1 2417 82 0 0 chr17 9630089 9630380 -75808100 - AluSc SINE Alu -18 291 1 1722 164 10 17 chr17 9630422 9630720 -75807760 - AluJb SINE Alu -16 296 1 1875 159 0 17 chr17 9631144 9631445 -75807035 - AluJo SINE Alu -16 296 1 378 179 193 14 chr17 9632148 9632288 -75806192 - L1MB4 LINE L1 -6 6174 6010 2215 109 7 0 chr17 9632335 9632629 -75805851 + AluSx SINE Alu 2 297 -15 1837 182 22 25 chr17 9632629 9632840 -75805640 - L1MB4 LINE L1 -152 6028 5817 2212 111 7 10 chr17 9632840 9633147 -75805333 - AluSp SINE Alu -7 306 1 1837 182 22 25 chr17 9633147 9633303 -75805177 - L1MB4 LINE L1 -363 5817 5662 2250 111 0 10 chr17 9633941 9634248 -75804232 - AluSx SINE Alu -8 304 1 256 280 32 40 chr17 9634261 9634386 -75804094 + MIR SINE MIR 37 160 -102 1046 138 23 0 chr17 9635250 9635424 -75803056 + L1ME4a LINE L1 5301 5478 -700 2215 102 3 10 chr17 9635424 9635717 -75802763 - AluSx SINE Alu -21 291 1 2116 92 34 7 chr17 9635727 9636022 -75802458 - AluSg SINE Alu -7 303 1 2512 63 0 3 chr17 9636356 9636657 -75801823 + AluY SINE Alu 1 300 -11 2266 108 3 0 chr17 9636881 9637176 -75801304 - AluSx SINE Alu -16 296 1 263 217 169 21 chr17 9637411 9637600 -75800880 + L1ME4a LINE L1 5840 6056 -65 1692 81 190 8 chr17 9637833 9638080 -75800400 + AluSg1 SINE Alu 1 292 -17 1344 246 43 33 chr17 9638182 9638573 -75799907 + L1ME3 LINE L1 5768 6162 0 237 119 0 0 chr17 9638959 9639001 -75799479 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 26 30 0 0 chr17 9639001 9639034 -75799446 + AT_rich Low_complexity Low_complexity 1 33 0 589 151 27 16 chr17 9639034 9639517 -75798963 + (TA)n Simple_repeat Simple_repeat 1 488 0 304 224 20 51 chr17 9639517 9639615 -75798865 - L1MCa LINE L1 -4361 2065 1971 430 196 52 12 chr17 9639632 9639805 -75798675 + (TA)n Simple_repeat Simple_repeat 1 180 0 2042 104 0 0 chr17 9640669 9640939 -75797541 - AluSc SINE Alu -3 306 37 789 318 55 13 chr17 9642432 9642816 -75795664 - LTR16C LTR ERVL -2 489 90 212 340 50 35 chr17 9643241 9643382 -75795098 + MIR SINE MIR 55 197 -65 312 263 118 33 chr17 9643472 9643624 -75794856 + MLT1K LTR MaLR 13 177 -411 423 300 38 33 chr17 9643668 9643878 -75794602 + MLT1K LTR MaLR 257 467 -121 486 75 0 0 chr17 9644178 9644245 -75794235 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 189 0 0 0 chr17 9644243 9644264 -75794216 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 1054 127 13 0 chr17 9644264 9644414 -75794066 - AluSg/x SINE Alu -10 302 151 530 306 41 0 chr17 9644904 9644942 -75793538 - LTR33 LTR ERVL 0 521 486 1739 204 79 27 chr17 9644942 9645384 -75793096 - MLT1C LTR MaLR -2 465 1 530 306 41 0 chr17 9645384 9645541 -75792939 - LTR33 LTR ERVL -35 486 318 2107 93 10 0 chr17 9645883 9646185 -75792295 + AluSq SINE Alu 1 305 -8 196 111 0 0 chr17 9646509 9646536 -75791944 + MIR SINE MIR 118 144 -118 270 0 0 0 chr17 9646732 9646762 -75791718 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2152 83 3 0 chr17 9647708 9647997 -75790483 + AluY SINE Alu 1 290 -21 2041 111 9 19 chr17 9648172 9648487 -75789993 - AluSx SINE Alu 0 312 1 1024 80 13 13 chr17 9648729 9648879 -75789601 - AluSg SINE Alu -160 150 1 326 164 96 14 chr17 9648879 9648952 -75789528 - LTR41 LTR ERVL -694 79 1 372 253 22 101 chr17 9649558 9649736 -75788744 - L1ME4a LINE L1 -2 6119 5956 263 226 21 21 chr17 9650306 9650399 -75788081 - L1M4 LINE L1 -1701 4445 4353 1865 139 0 0 chr17 9650419 9650699 -75787781 - AluJb SINE Alu -32 280 1 318 326 156 28 chr17 9650797 9651079 -75787401 - L1M4 LINE L1 -1946 4200 3883 288 257 44 29 chr17 9651433 9651569 -75786911 - L1MEd LINE L1 -3896 2233 2096 813 222 51 34 chr17 9651763 9652056 -75786424 - L1M4 LINE L1 -1455 4691 4394 444 256 68 44 chr17 9652086 9652165 -75786315 - L1MEd LINE L1 -4938 1181 1105 2130 128 0 0 chr17 9652165 9652471 -75786009 + AluSx SINE Alu 1 306 -6 444 256 68 44 chr17 9652471 9652684 -75785796 - L1MEd LINE L1 -5014 1105 882 436 317 105 62 chr17 9653248 9653554 -75784926 - MLT1K LTR MaLR -257 331 13 2130 105 0 0 chr17 9654962 9655257 -75783223 - AluSg SINE Alu -15 295 1 2052 102 0 3 chr17 9656259 9656552 -75781928 + AluY SINE Alu 1 292 -19 839 60 0 26 chr17 9656581 9656698 -75781782 + L1PA5 LINE L1 6041 6154 0 729 144 20 0 chr17 9657620 9657766 -75780714 + (TCTA)n Simple_repeat Simple_repeat 4 152 0 378 0 0 0 chr17 9658059 9658101 -75780379 + (CA)n Simple_repeat Simple_repeat 2 43 0 2233 151 15 33 chr17 9658397 9658794 -75779686 - MLT1B LTR MaLR 0 390 1 2153 107 0 7 chr17 9659222 9659530 -75778950 - AluSg SINE Alu -4 306 1 2027 106 16 13 chr17 9660213 9660516 -75777964 - AluSx SINE Alu -8 304 1 1808 91 72 11 chr17 9660677 9660970 -75777510 - AluSg SINE Alu 0 309 1 1881 109 49 0 chr17 9661234 9661518 -75776962 - AluSx SINE Alu -14 298 1 2142 62 0 4 chr17 9661852 9662125 -75776355 + AluY SINE Alu 1 272 -39 1916 91 11 0 chr17 9662418 9662683 -75775797 + L1PA8 LINE L1 5905 6172 0 601 232 9 14 chr17 9662690 9662901 -75775579 - L1MCa LINE L1 -3132 3294 3085 336 278 158 23 chr17 9662948 9663081 -75775399 - L1MCa LINE L1 -4483 1943 1793 1113 274 117 22 chr17 9663662 9663742 -75774738 - LTR16C LTR ERVL -4 487 416 1986 116 7 13 chr17 9663742 9664052 -75774428 + AluSx SINE Alu 1 308 -4 1113 274 117 22 chr17 9664052 9664416 -75774064 - LTR16C LTR ERVL -75 416 1 734 247 88 18 chr17 9664613 9664823 -75773657 + L1MC/D LINE L1 5509 5738 -2070 2327 75 0 3 chr17 9664823 9665117 -75773363 + AluY SINE Alu 1 293 -18 967 148 24 0 chr17 9665117 9665286 -75773194 - L1M4 LINE L1 -700 5478 5306 308 268 28 63 chr17 9666146 9666288 -75772192 - MIR SINE MIR -89 173 37 2159 115 0 6 chr17 9666301 9666613 -75771867 + AluSx SINE Alu 1 310 -2 716 233 186 36 chr17 9667160 9667342 -75771138 + MER5C DNA MER1_type 8 162 -162 2010 105 0 3 chr17 9667342 9667671 -75770809 - AluSx SINE Alu 0 328 1 716 233 186 36 chr17 9667671 9667762 -75770718 + MER5C DNA MER1_type 162 323 -1 1930 176 14 39 chr17 9668050 9668090 -75770390 - L1MB3 LINE L1 0 6183 6144 1967 113 0 7 chr17 9668090 9668372 -75770108 - AluSc SINE Alu -21 288 9 1930 176 14 39 chr17 9668372 9668747 -75769733 - L1MB3 LINE L1 -39 6144 5778 442 327 133 26 chr17 9668790 9668871 -75769609 + L2 LINE L2 2090 2161 -1153 1982 129 3 3 chr17 9668871 9669181 -75769299 - AluSx SINE Alu -2 310 1 442 327 133 26 chr17 9669181 9669445 -75769035 + L2 LINE L2 2161 2472 -842 213 319 0 0 chr17 9669462 9669534 -75768946 + L2 LINE L2 2737 2808 -506 2129 113 0 0 chr17 9669682 9670005 -75768475 + AluSx SINE Alu 1 312 0 5054 160 21 7 chr17 9670084 9671128 -75767352 - L1PA16 LINE L1 -13 6153 5100 860 227 16 77 chr17 9673267 9673514 -75764966 - MIR SINE MIR -23 239 8 379 282 86 59 chr17 9673564 9673819 -75764661 - L2 LINE L2 -2 3270 3009 1413 173 67 28 chr17 9674827 9675111 -75763369 + AluJo SINE Alu 1 295 -17 248 219 0 55 chr17 9676490 9676563 -75761917 - MIR SINE MIR -174 88 20 991 226 107 53 chr17 9676635 9677047 -75761433 - HAL1 LINE L1 -779 1728 1295 1954 114 0 44 chr17 9677050 9677365 -75761115 - AluSx SINE Alu -11 301 1 1218 264 67 96 chr17 9677843 9678221 -75760259 - L1MC4a LINE L1 -748 5398 5721 2279 92 3 13 chr17 9678221 9678536 -75759944 + AluSx SINE Alu 1 312 0 1218 264 67 96 chr17 9678536 9679349 -75759131 - L1MC4a LINE L1 -424 5722 4887 2314 84 0 3 chr17 9679380 9679691 -75758789 - AluSg SINE Alu 0 310 1 2452 47 0 3 chr17 9680113 9680411 -75758069 + AluY SINE Alu 1 297 -14 30 45 0 0 chr17 9680413 9680457 -75758023 + AT_rich Low_complexity Low_complexity 1 44 0 881 351 93 13 chr17 9680540 9681312 -75757168 - L2 LINE L2 0 3272 2439 593 231 77 122 chr17 9681322 9681369 -75757111 + MER58C DNA MER1_type 3 51 -2369 2228 98 0 3 chr17 9681369 9681675 -75756805 - AluSg SINE Alu -5 305 1 593 231 77 122 chr17 9681675 9681848 -75756632 + MER58C DNA MER1_type 51 213 -2 2071 102 0 0 chr17 9682182 9682495 -75755985 + AluSx SINE Alu 1 313 0 1984 77 0 22 chr17 9683249 9683521 -75754959 - AluSc SINE Alu -7 302 37 491 258 92 7 chr17 9683824 9684070 -75754410 + LTR40a LTR ERVL 123 358 -104 2253 92 0 6 chr17 9684164 9684479 -75754001 - AluSq SINE Alu 0 313 1 1083 248 91 98 chr17 9685229 9685534 -75752946 - L2 LINE L2 -248 3065 2760 270 0 0 0 chr17 9685534 9685564 -75752916 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1083 248 91 98 chr17 9685564 9685596 -75752884 - L2 LINE L2 -553 2760 2729 1848 124 51 40 chr17 9685596 9685848 -75752632 - L1MA4 LINE L1 -11 6289 6030 2073 104 7 0 chr17 9685848 9686137 -75752343 - AluSx SINE Alu -21 291 1 1848 124 51 40 chr17 9686137 9686238 -75752242 - L1MA4 LINE L1 -270 6030 5932 1083 248 91 98 chr17 9686238 9686654 -75751826 - L2 LINE L2 -584 2729 2315 1982 126 11 0 chr17 9686656 9687025 -75751455 - Charlie3 DNA MER1_type -4 2706 1 891 291 96 14 chr17 9687054 9687149 -75751331 - L2 LINE L2 -1060 2254 2168 2372 70 0 10 chr17 9687149 9687451 -75751029 + AluSg SINE Alu 1 299 -11 891 291 96 14 chr17 9687451 9687784 -75750696 - L2 LINE L2 -1146 2168 1791 1614 177 29 0 chr17 9687944 9688221 -75750259 + AluJb SINE Alu 17 301 -11 839 164 3 0 chr17 9688242 9688878 -75749602 + (TG)n Simple_repeat Simple_repeat 1 638 0 23 54 0 0 chr17 9688970 9689007 -75749473 + AT_rich Low_complexity Low_complexity 1 37 0 314 195 130 0 chr17 9689099 9689176 -75749304 - L1ME3A LINE L1 -52 6118 6032 2050 84 3 71 chr17 9689604 9689927 -75748553 + AluSx SINE Alu 1 301 -11 192 309 29 0 chr17 9690312 9690380 -75748100 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 9690563 9690753 -75747727 + MIR3 SINE MIR 8 203 -5 977 245 69 35 chr17 9691289 9691607 -75746873 - MLT1I LTR MaLR -1 408 80 556 210 156 27 chr17 9691984 9692170 -75746310 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 9692201 9692317 -75746163 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 9692580 9693097 -75745383 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 9693904 9693937 -75744543 + MIR SINE MIR 73 105 -157 559 169 0 0 chr17 9694387 9694476 -75744004 - FLAM_A SINE Alu -49 93 5 392 303 103 9 chr17 9694984 9695161 -75743319 + MIR SINE MIR 47 249 -13 2711 167 53 46 chr17 9696004 9696530 -75741950 - LTR31 LTR ERV1 -15 604 75 2199 266 101 60 chr17 9696624 9698047 -75740433 - HAL1 LINE L1 -607 1900 420 291 267 44 0 chr17 9698267 9698357 -75740123 - HAL1 LINE L1 -2370 137 44 682 269 44 26 chr17 9698510 9698737 -75739743 + MIR SINE MIR 32 262 0 2362 96 3 0 chr17 9698988 9699290 -75739190 + AluSx SINE Alu 1 303 -9 739 281 25 34 chr17 9699351 9699586 -75738894 - MIR SINE MIR -29 233 1 21 0 0 0 chr17 9700521 9700542 -75737938 + AT_rich Low_complexity Low_complexity 1 21 0 2274 114 0 25 chr17 9700879 9701194 -75737286 + AluSx SINE Alu 5 311 -1 393 61 0 61 chr17 9701813 9701879 -75736601 - L1PA16 LINE L1 -2 6164 6103 2171 102 14 10 chr17 9701895 9702190 -75736290 + AluSq SINE Alu 2 297 -16 300 111 0 0 chr17 9702193 9702238 -75736242 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 507 207 9 9 chr17 9702435 9702551 -75735929 - L1ME3A LINE L1 -9 6161 6046 224 267 150 0 chr17 9702678 9702738 -75735742 + L2 LINE L2 3232 3300 -13 183 42 0 0 chr17 9702778 9702802 -75735678 + (CA)n Simple_repeat Simple_repeat 2 25 0 742 270 98 14 chr17 9702839 9702977 -75735503 + MIR SINE MIR 3 167 -95 2411 105 0 0 chr17 9702977 9703281 -75735199 - AluSx SINE Alu -8 304 1 742 270 98 14 chr17 9703281 9703357 -75735123 + MIR SINE MIR 167 235 -27 316 87 0 0 chr17 9704536 9704582 -75733898 + AluSq/x SINE Alu 90 135 -167 2297 108 0 0 chr17 9704582 9704877 -75733603 + AluSx SINE Alu 1 295 -17 804 156 0 8 chr17 9705086 9705214 -75733266 + FLAM_C SINE Alu 1 127 -16 1821 57 0 25 chr17 9705214 9705488 -75732992 + L1PA8 LINE L1 5929 6172 0 1615 137 128 9 chr17 9705749 9706086 -75732394 - L1MB2 LINE L1 0 6171 5795 2258 93 0 7 chr17 9706103 9706393 -75732087 - AluSc SINE Alu -21 288 1 1619 167 10 61 chr17 9706690 9706838 -75731642 + AluJo SINE Alu 1 126 -186 1875 139 0 77 chr17 9706838 9707161 -75731319 + AluSx SINE Alu 1 298 -14 1619 167 10 61 chr17 9707161 9707324 -75731156 + AluJo SINE Alu 126 296 -16 296 294 55 60 chr17 9707608 9707809 -75730671 - MIR SINE MIR -31 231 32 2488 77 7 3 chr17 9708280 9708590 -75729890 + AluSq SINE Alu 1 311 -2 285 97 0 48 chr17 9708594 9708656 -75729824 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 441 256 26 8 chr17 9709199 9709316 -75729164 + L2 LINE L2 1868 1986 -1328 2257 100 10 3 chr17 9709332 9709632 -75728848 + AluSc SINE Alu 1 302 -7 525 228 49 9 chr17 9709723 9709871 -75728609 + L1ME3A LINE L1 6001 6161 -3 672 168 0 0 chr17 9709943 9710068 -75728412 + (CA)n Simple_repeat Simple_repeat 1 125 0 262 209 4 0 chr17 9710347 9710405 -75728075 - MIR SINE MIR -59 149 90 276 321 0 0 chr17 9711473 9711554 -75726926 + Charlie8 DNA MER1_type 5 85 -2332 755 238 138 0 chr17 9711584 9711773 -75726707 + MIR SINE MIR 12 226 -36 348 298 71 0 chr17 9712188 9712356 -75726124 - MARNA DNA Mariner -78 508 329 326 316 88 0 chr17 9712863 9712977 -75725503 + L2 LINE L2 3147 3270 -2 452 330 109 0 chr17 9713043 9713264 -75725216 - L1M4 LINE L1 -3321 2825 2581 2309 97 0 0 chr17 9713884 9714172 -75724308 + AluSx SINE Alu 1 288 -24 27 0 0 0 chr17 9714172 9714199 -75724281 + AT_rich Low_complexity Low_complexity 1 27 0 252 291 19 19 chr17 9714270 9714373 -75724107 + HsTC2 DNA Tc2 1 103 -1795 1894 161 0 13 chr17 9714386 9714691 -75723789 + AluJb SINE Alu 8 308 -4 234 220 0 0 chr17 9714695 9714745 -75723735 + HsTC2 DNA Tc2 40 89 -1809 2383 95 0 0 chr17 9715145 9715439 -75723041 + AluSq SINE Alu 1 294 -19 361 324 0 9 chr17 9715560 9715671 -75722809 + MIR SINE MIR 32 141 -121 2414 59 0 14 chr17 9716023 9716350 -75722130 - AluSq SINE Alu 0 323 1 21 0 0 0 chr17 9717458 9717479 -75721001 + AT_rich Low_complexity Low_complexity 1 21 0 562 301 107 35 chr17 9717554 9717858 -75720622 - L1MC/D LINE L1 -764 5382 5147 2371 88 0 28 chr17 9717858 9717892 -75720588 - AluY SINE Alu -1 310 277 195 42 0 0 chr17 9717892 9717916 -75720564 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2371 88 0 28 chr17 9717916 9718200 -75720280 - AluY SINE Alu -34 277 1 562 301 107 35 chr17 9718200 9718377 -75720103 - L1MC/D LINE L1 -999 5147 4984 1785 129 98 0 chr17 9718451 9718707 -75719773 - AluSx SINE Alu -31 281 1 238 248 177 9 chr17 9718936 9719049 -75719431 - L1MC/D LINE L1 -1490 4656 4525 1147 212 81 90 chr17 9719634 9720091 -75718389 + LTR16A1 LTR ERVL 1 453 -4 206 200 0 60 chr17 9720096 9720146 -75718334 + MIR SINE MIR 159 205 -57 420 308 112 33 chr17 9720494 9720708 -75717772 + L3 LINE CR1 1344 1574 -3 229 279 143 68 chr17 9721225 9721490 -75716990 - MARNA DNA Mariner -42 544 260 632 205 39 32 chr17 9721552 9721708 -75716772 + MER103 DNA DNA 9 165 -1 326 169 0 17 chr17 9721849 9721908 -75716572 + L2 LINE L2 3254 3311 -2 367 350 51 6 chr17 9721919 9722096 -75716384 - MARNA DNA Mariner -343 243 59 1591 141 17 0 chr17 9723365 9723599 -75714881 + AluSg SINE Alu 55 292 -18 205 296 96 48 chr17 9723961 9724086 -75714394 + MIR3 SINE MIR 5 135 -73 2331 78 7 13 chr17 9724098 9724407 -75714073 - AluY SINE Alu -4 307 1 715 249 148 22 chr17 9724467 9724825 -75713655 + MER113 DNA MER1_type? 24 426 -95 355 175 12 9 chr17 9724864 9724946 -75713534 + L1PA16 LINE L1 6087 6166 0 210 296 148 28 chr17 9725479 9725587 -75712893 - L2 LINE L2 -20 3252 3132 1876 152 32 76 chr17 9726058 9726286 -75712194 - MLT1B LTR MaLR 0 390 186 2318 119 0 3 chr17 9726286 9726597 -75711883 - AluSx SINE Alu -2 310 1 1876 152 32 76 chr17 9726597 9726776 -75711704 - MLT1B LTR MaLR -204 186 1 454 194 104 22 chr17 9727099 9727233 -75711247 - MLT1J1 LTR MaLR -301 145 1 2031 143 4 0 chr17 9727933 9728233 -75710247 + AluSx SINE Alu 1 301 0 226 290 176 23 chr17 9728249 9728380 -75710100 + L2 LINE L2 3122 3272 0 2198 91 24 3 chr17 9728494 9728792 -75709688 + AluSx SINE Alu 2 305 -7 465 265 26 50 chr17 9729245 9729441 -75709039 - MIR SINE MIR -52 210 14 220 224 149 0 chr17 9729418 9729485 -75708995 + MIR3 SINE MIR 110 186 -22 * 398 255 0 149 chr17 9730109 9730297 -75708183 + MIR SINE MIR 29 188 -74 802 189 18 24 chr17 9731842 9732011 -75706469 + MER3 DNA MER1_type 23 190 -19 229 159 48 32 chr17 9732071 9732134 -75706346 + C-rich Low_complexity Low_complexity 6 69 0 2317 107 0 19 chr17 9732317 9732635 -75705845 + AluSx SINE Alu 1 312 0 1044 189 39 45 chr17 9732775 9732847 -75705633 - MLT1A1 LTR MaLR -81 284 213 1752 152 81 3 chr17 9732847 9733130 -75705350 - AluJo SINE Alu -7 305 1 1044 189 39 45 chr17 9733130 9733343 -75705137 - MLT1A1 LTR MaLR -152 213 1 335 180 0 0 chr17 9734055 9734116 -75704364 + MIR SINE MIR 95 155 -107 2322 84 7 3 chr17 9734165 9734461 -75704019 - AluSg SINE Alu -13 297 1 1782 92 0 17 chr17 9735334 9735572 -75702908 + AluSc SINE Alu 1 234 -75 268 164 18 36 chr17 9735573 9735628 -75702852 + MIR SINE MIR 90 143 -65 485 258 13 38 chr17 9735715 9735874 -75702606 + MER103 DNA DNA 3 157 -9 2319 156 48 24 chr17 9736021 9736439 -75702041 + MSTC LTR MaLR 1 428 0 831 156 0 0 chr17 9736586 9736765 -75701715 + (TG)n Simple_repeat Simple_repeat 1 179 0 902 151 6 0 chr17 9736803 9737170 -75701310 + (TG)n Simple_repeat Simple_repeat 1 369 0 2218 118 14 0 chr17 9737661 9737958 -75700522 - AluSx SINE Alu -11 301 1 247 347 82 12 chr17 9738133 9738303 -75700177 + L2 LINE L2 2902 3083 -189 2033 191 3 3 chr17 9738305 9738544 -75699936 - MSTA LTR MaLR 0 428 187 2088 93 3 74 chr17 9738544 9738885 -75699595 - AluSq SINE Alu 0 313 5 2033 191 3 3 chr17 9738885 9739016 -75699464 - MSTA LTR MaLR -240 188 58 252 193 0 53 chr17 9739291 9739348 -75699132 - MER5A DNA MER1_type -2 187 134 656 299 91 29 chr17 9739408 9739859 -75698621 + HAL1 LINE L1 2024 2502 -5 2016 108 73 3 chr17 9739860 9740146 -75698334 - AluSq SINE Alu -7 306 1 990 164 0 18 chr17 9740166 9740358 -75698122 + AluSp SINE Alu 129 317 0 267 333 29 39 chr17 9740359 9740461 -75698019 + MER5A DNA MER1_type 64 164 -25 1614 159 47 43 chr17 9740895 9741196 -75697284 - AluJb SINE Alu -10 302 1 1060 255 9 0 chr17 9741648 9741879 -75696601 - MIR SINE MIR -6 256 24 237 167 0 0 chr17 9741910 9741952 -75696528 - MIR SINE MIR -199 63 22 1919 125 11 4 chr17 9742543 9742855 -75695625 - AluSq SINE Alu 0 314 1 2399 132 55 38 chr17 9742866 9742916 -75695564 - L1MB3 LINE L1 -1 6182 6134 2307 107 3 0 chr17 9742916 9743215 -75695265 - AluSx SINE Alu -12 300 1 1828 83 0 9 chr17 9743224 9743454 -75695026 - AluSg/x SINE Alu -6 306 79 2399 132 55 38 chr17 9743454 9743863 -75694617 - L1MB3 LINE L1 -56 6127 5705 584 214 76 7 chr17 9745326 9745471 -75693009 + MIR SINE MIR 30 184 -78 496 296 104 19 chr17 9746532 9746839 -75691641 - L1ME4a LINE L1 -1 6120 5788 259 294 48 48 chr17 9746924 9747097 -75691383 - L1ME4a LINE L1 0 6121 5949 208 0 0 0 chr17 9747097 9747120 -75691360 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2273 89 11 0 chr17 9747120 9747402 -75691078 - AluSx SINE Alu -1 307 1 259 294 48 48 chr17 9747402 9747479 -75691001 - L1ME4a LINE L1 -170 5951 5870 424 299 40 45 chr17 9747488 9747689 -75690791 - MIR SINE MIR 0 262 63 1924 131 10 3 chr17 9747914 9748212 -75690268 + AluSg SINE Alu 1 300 -10 372 301 8 6 chr17 9748746 9748864 -75689616 - MIR SINE MIR -50 212 96 32 0 0 0 chr17 9749539 9749571 -75688909 + AT_rich Low_complexity Low_complexity 1 32 0 402 282 106 57 chr17 9749577 9750105 -75688375 + L1ME4a LINE L1 5567 6120 -1 1705 230 4 4 chr17 9750822 9751273 -75687207 + MER119 DNA MER1_type 2 549 -34 202 334 74 42 chr17 9751571 9751882 -75686598 - L2 LINE L2 -46 3226 2906 261 264 46 81 chr17 9752262 9752349 -75686131 + L2 LINE L2 3169 3252 -20 1676 179 0 28 chr17 9752387 9752522 -75685958 + AluJb SINE Alu 3 140 -172 1868 122 38 0 chr17 9752522 9752810 -75685670 + AluSg SINE Alu 1 299 -11 1676 179 0 28 chr17 9752810 9752993 -75685487 + AluJb SINE Alu 140 312 0 2142 113 0 10 chr17 9753210 9753520 -75684960 + AluSc SINE Alu 1 307 -2 805 254 119 20 chr17 9754133 9754570 -75683910 - MLT1G LTR MaLR 0 590 3 1909 74 0 0 chr17 9755254 9755498 -75682982 - AluSc SINE Alu -8 301 58 2144 126 7 0 chr17 9755987 9756297 -75682183 + AluSx SINE Alu 1 312 0 2524 61 28 56 chr17 9756869 9757052 -75681428 - L1MA1 LINE L1 0 6302 6115 258 32 0 0 chr17 9757052 9757083 -75681397 + (TTA)n Simple_repeat Simple_repeat 3 33 0 2074 75 3 20 chr17 9757090 9757382 -75681098 - AluY SINE Alu -24 287 1 2524 61 28 56 chr17 9757382 9757585 -75680895 - L1MA1 LINE L1 -193 6109 5919 394 293 55 30 chr17 9758396 9758560 -75679920 + MIR3 SINE MIR 14 181 -27 711 64 0 0 chr17 9759111 9759205 -75679275 + AluY SINE Alu 152 245 -66 191 381 42 5 chr17 9759412 9759601 -75678879 - L2 LINE L2 -660 2654 2459 228 111 0 0 chr17 9759618 9759654 -75678826 + (TCC)n Simple_repeat Simple_repeat 2 37 0 2096 103 17 0 chr17 9760212 9760503 -75677977 - AluSg SINE Alu -14 296 1 1070 287 96 37 chr17 9760677 9761247 -75677233 - L2 LINE L2 0 3313 2659 2171 84 3 36 chr17 9761247 9761555 -75676925 - AluSx SINE Alu -14 298 1 1070 287 96 37 chr17 9761555 9761958 -75676522 - L2 LINE L2 -654 2659 2281 319 248 95 48 chr17 9762145 9762355 -75676125 - MIR SINE MIR -30 232 13 451 291 64 61 chr17 9763080 9763376 -75675104 + L2 LINE L2 2932 3228 -85 413 315 82 0 chr17 9763525 9763709 -75674771 + MIR SINE MIR 40 238 -24 206 230 0 115 chr17 9763723 9763810 -75674670 + L2 LINE L2 3195 3271 -1 222 324 65 28 chr17 9764044 9764152 -75674328 - L2 LINE L2 -13 3300 3189 181 321 19 0 chr17 9764487 9764540 -75673940 - L2 LINE L2 -576 2738 2685 249 33 0 0 chr17 9764892 9764922 -75673558 + (T)n Simple_repeat Simple_repeat 1 30 0 2389 87 0 0 chr17 9765029 9765341 -75673139 - AluSx SINE Alu 0 312 1 1288 135 50 0 chr17 9765414 9765614 -75672866 - AluJb SINE Alu -17 295 86 319 306 109 7 chr17 9765771 9765918 -75672562 + MIR SINE MIR 98 259 -3 330 26 0 0 chr17 9766086 9766125 -75672355 + (TG)n Simple_repeat Simple_repeat 2 40 0 1840 162 0 10 chr17 9766684 9766993 -75671487 + AluJo SINE Alu 1 306 -6 320 228 40 39 chr17 9766997 9767099 -75671381 + L1MC4 LINE L1 7836 8040 -2 1401 204 85 53 chr17 9767302 9767618 -75670862 + MER63B DNA MER1_type 5 338 -724 2236 73 10 3 chr17 9767618 9767918 -75670562 - AluSq SINE Alu -11 302 1 1401 204 85 53 chr17 9767918 9767999 -75670481 + MER63B DNA MER1_type 338 415 -21 665 193 0 0 chr17 9768223 9768337 -75670143 + FLAM_C SINE Alu 6 119 -24 217 220 0 40 chr17 9768697 9768747 -75669733 + L2 LINE L2 3259 3306 -7 * 549 222 56 24 chr17 9768726 9768852 -75669628 - MER5B DNA MER1_type -46 132 3 252 0 0 0 chr17 9769218 9769246 -75669234 + (TG)n Simple_repeat Simple_repeat 1 28 0 37 29 0 43 chr17 9769406 9769476 -75669004 + AT_rich Low_complexity Low_complexity 1 67 0 722 242 104 15 chr17 9769504 9769764 -75668716 - L1MC4 LINE L1 -1 8041 7759 974 220 77 65 chr17 9769842 9769954 -75668526 - L1MC4a LINE L1 -1973 5835 5726 2503 55 0 3 chr17 9769954 9770263 -75668217 - AluY SINE Alu -3 308 1 974 220 77 65 chr17 9770263 9770473 -75668007 - L1MC4a LINE L1 -2082 5726 5509 1155 270 117 22 chr17 9770670 9771034 -75667446 + LTR16C LTR ERVL 1 416 -75 2008 116 3 13 chr17 9771034 9771345 -75667135 - AluSx SINE Alu -4 308 1 1155 270 117 22 chr17 9771345 9771425 -75667055 + LTR16C LTR ERVL 416 487 -4 336 278 158 23 chr17 9772006 9772139 -75666341 + L1MCa LINE L1 1793 1943 -4483 1049 226 19 36 chr17 9772186 9772404 -75666076 + L1MCa LINE L1 3085 3294 -3132 3327 62 0 5 chr17 9772404 9772825 -75665655 - L1PA8 LINE L1 0 6172 5754 1049 226 19 36 chr17 9772825 9773021 -75665459 + L1MCa LINE L1 3294 3492 -2934 282 143 0 0 chr17 9773128 9773191 -75665289 + (CAT)n Simple_repeat Simple_repeat 3 65 0 1262 242 50 50 chr17 9773755 9774292 -75664188 + L1MCa LINE L1 3477 4013 -2413 1482 121 13 121 chr17 9774991 9775304 -75663176 - Tigger7 DNA MER2_type -1 2586 2308 753 177 0 125 chr17 9775307 9775499 -75662981 - Tigger7 DNA MER2_type -534 171 4 355 233 29 105 chr17 9775562 9775734 -75662746 - MIR3 SINE MIR -11 197 39 263 278 213 35 chr17 9775751 9775920 -75662560 - MIR SINE MIR -17 245 47 639 206 15 121 chr17 9775960 9776159 -75662321 - MIR SINE MIR -46 216 39 205 343 14 0 chr17 9776664 9776734 -75661746 - L2 LINE L2 -73 3199 3129 196 277 12 84 chr17 9776934 9777017 -75661463 - MIR SINE MIR -41 221 145 554 310 26 47 chr17 9777045 9777277 -75661203 + MIR SINE MIR 31 257 -5 2119 99 3 0 chr17 9777277 9777569 -75660911 - AluSc SINE Alu -16 293 1 339 106 0 0 chr17 9777576 9777623 -75660857 - MIR SINE MIR -106 156 110 2267 145 0 6 chr17 9778219 9778564 -75659916 - MER2 DNA MER2_type -1 343 1 2431 249 90 23 chr17 9778604 9779661 -75658819 - L1M4 LINE L1 -2232 3914 2787 2100 110 0 13 chr17 9779861 9779987 -75658493 + AluSc SINE Alu 1 127 -182 201 74 0 0 chr17 9779987 9780014 -75658466 + (TA)n Simple_repeat Simple_repeat 2 28 0 2100 110 0 13 chr17 9780014 9780197 -75658283 + AluSc SINE Alu 127 306 -3 1512 189 73 25 chr17 9780725 9781079 -75657401 - MLT1A2 LTR MaLR 0 374 4 339 368 38 27 chr17 9781194 9781379 -75657101 + MIR3 SINE MIR 20 206 -2 378 270 50 115 chr17 9781795 9782050 -75656430 + L1MC4 LINE L1 5673 5819 -302 584 284 66 30 chr17 9783615 9783812 -75654668 - MIR SINE MIR -10 252 49 506 235 9 0 chr17 9784410 9784525 -75653955 - MER5B DNA MER1_type 0 178 63 629 221 153 18 chr17 9784549 9784712 -75653768 + MER5A DNA MER1_type 4 188 -1 328 144 114 111 chr17 9784727 9784823 -75653657 + MER5A DNA MER1_type 6 141 -48 1944 138 0 0 chr17 9784823 9785172 -75653308 - AluSx SINE Alu 0 312 1 328 144 114 111 chr17 9785172 9785222 -75653258 + MER5A DNA MER1_type 141 189 0 508 358 49 23 chr17 9785416 9785664 -75652816 + L2 LINE L2 2354 2619 -695 198 0 0 0 chr17 9785664 9785686 -75652794 + (TG)n Simple_repeat Simple_repeat 1 22 0 508 358 49 23 chr17 9785686 9785864 -75652616 + L2 LINE L2 2619 2791 -523 196 281 67 59 chr17 9786145 9786280 -75652200 + L3b LINE CR1 1277 1412 -171 437 216 128 8 chr17 9786493 9786618 -75651862 + MIR3 SINE MIR 20 159 -49 1186 160 9 61 chr17 9786619 9786850 -75651630 + MER20 DNA MER1_type 1 219 0 291 188 75 38 chr17 9786860 9786940 -75651540 + MER5B DNA MER1_type 17 99 -79 362 210 240 30 chr17 9787218 9787301 -75651179 + MLT1J2 LTR MaLR 274 383 -67 213 39 0 0 chr17 9787301 9787327 -75651153 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 362 210 240 30 chr17 9787327 9787343 -75651137 + MLT1J2 LTR MaLR 383 394 -56 248 374 0 0 chr17 9789072 9789163 -75649317 - L3b LINE CR1 -248 1335 1245 478 313 25 69 chr17 9789402 9789836 -75648644 + L2 LINE L2 2487 2901 -413 1578 215 67 29 chr17 9789849 9790078 -75648402 - MLT1F1 LTR MaLR -125 442 188 213 39 0 0 chr17 9790078 9790104 -75648376 + (GA)n Simple_repeat Simple_repeat 2 27 0 1578 215 67 29 chr17 9790104 9790292 -75648188 - MLT1F1 LTR MaLR -379 188 9 499 317 30 25 chr17 9790502 9790701 -75647779 + MIR SINE MIR 48 247 -15 264 59 0 0 chr17 9790723 9790757 -75647723 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1618 141 87 0 chr17 9791434 9791710 -75646770 + AluJb SINE Alu 1 300 -12 2364 90 6 0 chr17 9792062 9792373 -75646107 - AluSq SINE Alu 0 313 1 458 326 109 0 chr17 9792993 9793214 -75645266 + L1M4 LINE L1 2581 2825 -3321 324 316 88 0 chr17 9793280 9793394 -75645086 - L2 LINE L2 -2 3270 3147 371 298 71 0 chr17 9793901 9794069 -75644411 + MARNA DNA Mariner 329 508 -78 747 238 138 0 chr17 9794484 9794673 -75643807 - MIR SINE MIR -36 226 12 300 321 0 0 chr17 9794703 9794784 -75643696 - Charlie8 DNA MER1_type -2332 85 5 271 224 35 17 chr17 9795853 9795911 -75642569 + MIR SINE MIR 91 149 -59 672 168 0 0 chr17 9796190 9796315 -75642165 + (TG)n Simple_repeat Simple_repeat 1 125 0 571 215 97 14 chr17 9796387 9796531 -75641949 - L1ME3A LINE L1 -9 6161 6006 2109 100 10 3 chr17 9796627 9796927 -75641553 - AluSc SINE Alu -7 302 1 438 256 26 8 chr17 9796943 9797060 -75641420 - L2 LINE L2 -1328 1986 1868 285 97 0 48 chr17 9797603 9797665 -75640815 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2335 77 7 3 chr17 9797669 9797979 -75640501 - AluSq SINE Alu -2 311 1 287 294 55 60 chr17 9798450 9798651 -75639829 + MIR SINE MIR 32 231 -31 1472 167 10 61 chr17 9798935 9799098 -75639382 - AluJo SINE Alu -16 296 155 1727 139 0 77 chr17 9799098 9799421 -75639059 - AluSx SINE Alu -14 298 1 1472 167 10 61 chr17 9799421 9799569 -75638911 - AluJo SINE Alu -157 155 1 2120 93 0 7 chr17 9799866 9800156 -75638324 + AluSc SINE Alu 1 288 -21 1710 137 128 9 chr17 9800173 9800510 -75637970 + L1MB2 LINE L1 5795 6171 0 1813 57 0 25 chr17 9800771 9801045 -75637435 - L1PA8 LINE L1 0 6172 5929 783 151 0 8 chr17 9801045 9801171 -75637309 - FLAM_C SINE Alu -16 127 3 2077 112 3 0 chr17 9801382 9801676 -75636804 - AluSx SINE Alu -17 295 1 332 87 0 0 chr17 9801676 9801722 -75636758 - AluSq/x SINE Alu -168 135 90 743 270 98 14 chr17 9802901 9802977 -75635503 - MIR SINE MIR -27 235 167 2259 105 0 0 chr17 9802977 9803281 -75635199 + AluSx SINE Alu 1 304 -8 743 270 98 14 chr17 9803281 9803419 -75635061 - MIR SINE MIR -95 167 3 183 42 0 0 chr17 9803456 9803480 -75635000 + (TG)n Simple_repeat Simple_repeat 2 25 0 225 267 150 0 chr17 9803520 9803580 -75634900 - L2 LINE L2 -13 3300 3232 532 207 9 9 chr17 9803707 9803823 -75634657 + L1ME3A LINE L1 6046 6161 -9 300 111 0 0 chr17 9804020 9804065 -75634415 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 1954 105 17 10 chr17 9804068 9804362 -75634118 - AluSq SINE Alu -16 297 2 397 61 0 61 chr17 9804378 9804444 -75634036 + L1PA16 LINE L1 6103 6164 -2 2121 114 0 25 chr17 9805063 9805378 -75633102 - AluSx SINE Alu -1 311 5 21 0 0 0 chr17 9805715 9805736 -75632744 + AT_rich Low_complexity Low_complexity 1 21 0 717 272 39 15 chr17 9806670 9806876 -75631604 + MIR SINE MIR 1 211 -51 1022 117 13 0 chr17 9806965 9807119 -75631361 - AluSg/x SINE Alu -9 303 148 1310 195 44 41 chr17 9807578 9807791 -75630689 + MLT1A1 LTR MaLR 1 217 -148 1565 153 85 3 chr17 9807791 9808073 -75630407 + AluJo SINE Alu 1 305 -7 1310 195 44 41 chr17 9808073 9808202 -75630278 + MLT1A1 LTR MaLR 217 344 -21 192 309 29 0 chr17 9808614 9808682 -75629798 - MIR SINE MIR -42 220 151 431 279 53 21 chr17 9808865 9809055 -75629425 + MIR3 SINE MIR 8 203 -5 971 233 73 37 chr17 9809590 9809890 -75628590 - MLT1I LTR MaLR -1 408 98 556 210 156 27 chr17 9810285 9810471 -75628009 + MER63A DNA MER1_type 1 210 0 222 345 69 43 chr17 9810502 9810618 -75627862 + L2 LINE L2 3101 3219 -53 2232 139 43 114 chr17 9810881 9811398 -75627082 + LTR12 LTR ERV1 1 480 -234 198 182 0 0 chr17 9812205 9812238 -75626242 + MIR SINE MIR 73 105 -157 559 169 0 0 chr17 9812688 9812777 -75625703 - FLAM_A SINE Alu -49 93 5 392 303 103 9 chr17 9813285 9813462 -75625018 + MIR SINE MIR 47 249 -13 2711 167 53 46 chr17 9814305 9814831 -75623649 - LTR31 LTR ERV1 -15 604 75 2473 262 102 61 chr17 9814925 9816348 -75622132 - HAL1 LINE L1 -607 1900 420 291 233 56 11 chr17 9816568 9816658 -75621822 - HAL1 LINE L1 -2370 137 44 680 269 44 26 chr17 9816811 9817038 -75621442 + MIR SINE MIR 32 262 0 2180 112 0 0 chr17 9817289 9817592 -75620888 + AluSq SINE Alu 1 303 -10 259 281 61 26 chr17 9817715 9817829 -75620651 + MIR SINE MIR 86 203 -59 260 413 35 6 chr17 9818350 9818469 -75620011 - MER5B DNA MER1_type -1 177 50 1212 107 0 73 chr17 9818469 9818674 -75619806 - MER30B DNA MER1_type 0 190 1 260 413 35 6 chr17 9818674 9818726 -75619754 - MER5B DNA MER1_type -128 50 1 446 180 168 31 chr17 9818940 9819101 -75619379 - Charlie7 DNA MER1_type -5 2607 2425 598 217 17 0 chr17 9819370 9819485 -75618995 + FLAM_C SINE Alu 1 117 -16 21 0 0 0 chr17 9819485 9819506 -75618974 + AT_rich Low_complexity Low_complexity 1 21 0 229 229 73 42 chr17 9820320 9820416 -75618064 + Tigger3(Golem) DNA MER2_type 2218 2316 -713 2099 120 3 0 chr17 9820867 9821168 -75617312 - AluSp SINE Alu -11 302 1 1096 259 97 78 chr17 9821230 9821755 -75616725 - MER34 LTR ERV1 0 542 8 872 270 4 44 chr17 9821858 9822084 -75616396 - MIR SINE MIR 0 262 46 202 227 23 0 chr17 9822152 9822196 -75616284 + L2 LINE L2 3269 3313 0 1016 160 53 70 chr17 9822460 9822600 -75615880 + L1MD3 LINE L1 7756 7892 -103 2213 56 42 0 chr17 9822600 9822887 -75615593 + AluYa5 SINE Alu 2 300 -11 1016 160 53 70 chr17 9822887 9822990 -75615490 + L1MD3 LINE L1 7892 7995 0 923 251 97 28 chr17 9823089 9823408 -75615072 - MER102b DNA MER1_type 0 341 1 321 304 5 98 chr17 9824060 9824124 -75614356 - MER5B DNA MER1_type 0 178 110 1380 188 53 18 chr17 9824124 9824246 -75614234 + AluJo SINE Alu 1 117 -195 797 0 11 0 chr17 9824246 9824339 -75614141 + (TAAAA)n Simple_repeat Simple_repeat 5 98 0 1380 188 53 18 chr17 9824339 9824498 -75613982 + AluJo SINE Alu 117 292 -20 321 304 5 98 chr17 9824498 9824627 -75613853 - MER5B DNA MER1_type -68 110 3 230 273 115 18 chr17 9824843 9824956 -75613524 + MIR SINE MIR 30 153 -93 295 227 172 62 chr17 9825135 9825263 -75613217 - L2 LINE L2 0 3313 3172 482 233 169 97 chr17 9826036 9826370 -75612110 - MLT1G LTR MaLR -41 549 168 2685 3 0 0 chr17 9826370 9826667 -75611813 - AluYa5 SINE Alu -10 301 5 482 233 169 97 chr17 9826667 9826827 -75611653 - MLT1G LTR MaLR -422 168 21 289 294 100 48 chr17 9826931 9827200 -75611280 + L1M4 LINE L1 15 297 -6245 3079 237 53 73 chr17 9827350 9829256 -75609224 + L1M4 LINE L1 533 2555 -4270 413 261 163 38 chr17 9829273 9829457 -75609023 - MIR SINE MIR -54 208 2 314 254 0 0 chr17 9830073 9830140 -75608340 - MLT1G1 LTR MaLR 0 555 489 1161 112 0 6 chr17 9830140 9830365 -75608115 - AluSp SINE Alu 0 341 118 801 239 77 107 chr17 9830376 9830807 -75607673 - MLT1G1 LTR MaLR -113 454 37 1963 96 11 4 chr17 9832237 9832543 -75605937 + AluSq SINE Alu 1 308 0 293 377 27 6 chr17 9833225 9833399 -75605081 + MIR SINE MIR 9 184 -61 2074 129 0 16 chr17 9833448 9833758 -75604722 - AluSx SINE Alu -7 305 1 225 250 0 0 chr17 9834000 9834048 -75604432 + L2 LINE L2 3196 3243 -70 372 315 108 14 chr17 9834048 9834308 -75604172 + L2 LINE L2 2969 3308 -5 348 333 86 12 chr17 9835077 9835239 -75603241 - MER5A DNA MER1_type -15 174 1 397 198 105 0 chr17 9836100 9836186 -75602294 + MER53 DNA DNA 1 95 -94 313 185 99 12 chr17 9836116 9836197 -75602283 - MER53 DNA DNA -7 182 95 * 741 226 145 47 chr17 9836268 9836648 -75601832 - MER96B DNA MER1_type 0 417 1 228 240 27 53 chr17 9836824 9836899 -75601581 + L2 LINE L2 3194 3266 -6 481 213 27 53 chr17 9837393 9837432 -75601048 - MER5B DNA MER1_type -1 177 138 2039 110 3 19 chr17 9837432 9837749 -75600731 - AluSx SINE Alu 0 312 1 481 213 27 53 chr17 9837749 9837859 -75600621 - MER5B DNA MER1_type -40 138 32 4457 172 63 21 chr17 9837860 9837914 -75600566 - L1MB3 LINE L1 0 6183 6133 2213 93 3 0 chr17 9837914 9838215 -75600265 - AluSx SINE Alu -10 302 1 4457 172 63 21 chr17 9838215 9839191 -75599289 - L1MB3 LINE L1 -50 6133 5107 194 279 0 0 chr17 9839197 9839240 -75599240 - MER5B DNA MER1_type -130 48 6 208 261 0 62 chr17 9839975 9840040 -75598440 - MIR SINE MIR -60 148 88 1544 300 42 15 chr17 9840070 9840596 -75597884 + MLT1K LTR MaLR 41 580 -8 194 245 19 0 chr17 9841217 9841270 -75597210 + MIR SINE MIR 101 154 -108 268 265 48 12 chr17 9841659 9841742 -75596738 + MIR SINE MIR 66 151 -57 495 333 111 44 chr17 9841766 9842632 -75595848 + L2 LINE L2 2328 3238 -34 324 120 0 0 chr17 9842974 9843024 -75595456 + (TG)n Simple_repeat Simple_repeat 1 50 0 283 157 0 20 chr17 9844145 9844196 -75594284 + L2 LINE L2 3261 3310 -3 507 237 114 0 chr17 9844658 9844789 -75593691 + MER96 DNA MER1_type? 3 148 -27 248 229 93 73 chr17 9845010 9845215 -75593265 + Charlie8 DNA MER1_type 117 1426 -991 606 291 44 60 chr17 9845247 9845680 -75592800 + LTR16B LTR ERVL 36 461 -3 1363 214 4 4 chr17 9846155 9846436 -75592044 + L1 LINE L1 4958 5238 -908 401 250 0 20 chr17 9846809 9846909 -75591571 - MIR SINE MIR -88 120 23 375 207 43 24 chr17 9846981 9847145 -75591335 + CT-rich Low_complexity Low_complexity 3 169 0 656 240 139 35 chr17 9847593 9847707 -75590773 + L1ME4a LINE L1 5715 5816 -305 2155 76 31 0 chr17 9847707 9847995 -75590485 + AluSq SINE Alu 1 297 -16 656 240 139 35 chr17 9847995 9848246 -75590234 + L1ME4a LINE L1 5816 6118 -3 293 95 0 0 chr17 9848266 9848308 -75590172 + MADE1 DNA Mariner 3 44 -36 3138 156 44 29 chr17 9848664 9848949 -75589531 - MER7C DNA MER2_type -2427 601 322 2361 102 0 7 chr17 9848949 9849254 -75589226 + AluSx SINE Alu 1 303 -9 3138 156 44 29 chr17 9849254 9849558 -75588922 - MER7C DNA MER2_type -2706 322 3 462 248 35 9 chr17 9850602 9850715 -75587765 + MIR SINE MIR 5 120 -142 399 218 65 17 chr17 9850731 9850959 -75587521 + L2 LINE L2 2997 3310 -3 287 292 106 0 chr17 9850954 9851067 -75587413 + MIR SINE MIR 138 262 0 * 450 267 18 61 chr17 9851194 9851285 -75587195 - Charlie8 DNA MER1_type -175 166 84 2275 96 3 7 chr17 9851285 9851586 -75586894 + AluSg SINE Alu 11 310 0 450 267 18 61 chr17 9851586 9851659 -75586821 - Charlie8 DNA MER1_type -257 84 9 1663 111 40 28 chr17 9852002 9852255 -75586225 - AluSx SINE Alu -22 290 35 2296 117 3 0 chr17 9852517 9852824 -75585656 - AluSg SINE Alu 0 310 3 808 271 92 0 chr17 9853972 9854234 -75584246 + L2 LINE L2 2383 2668 -646 736 281 242 10 chr17 9854520 9854908 -75583572 + L2 LINE L2 2836 3313 0 2086 117 0 0 chr17 9854914 9855187 -75583293 + AluSx SINE Alu 1 273 -39 180 0 0 0 chr17 9855187 9855207 -75583273 + (TC)n Simple_repeat Simple_repeat 2 21 0 205 274 0 16 chr17 9856206 9856268 -75582212 - MIR SINE MIR -61 147 87 180 298 24 24 chr17 9857345 9857429 -75581051 - MIR3 SINE MIR -35 173 90 942 230 123 14 chr17 9857820 9858177 -75580303 + L1ME2 LINE L1 5760 6155 -9 2281 101 0 0 chr17 9859229 9859517 -75578963 - AluY SINE Alu -23 288 1 415 301 27 60 chr17 9863302 9863485 -75574995 - MIR SINE MIR -35 227 51 225 313 0 0 chr17 9864403 9864467 -75574013 - MIR SINE MIR -163 99 36 423 0 0 0 chr17 9864962 9865009 -75573471 + (TG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr17 9865175 9865196 -75573284 + (TG)n Simple_repeat Simple_repeat 1 21 0 284 326 10 0 chr17 9865529 9865627 -75572853 + MER5A DNA MER1_type 11 109 -80 2194 82 0 0 chr17 9866142 9866410 -75572070 - AluSg SINE Alu -5 305 38 759 233 18 54 chr17 9866619 9866670 -75571810 + MIR SINE MIR 5 56 -206 2647 43 0 0 chr17 9866670 9866969 -75571511 + AluY SINE Alu 1 299 -12 759 233 18 54 chr17 9866969 9867140 -75571340 + MIR SINE MIR 56 219 -43 348 64 0 0 chr17 9867175 9867222 -75571258 + (ATG)n Simple_repeat Simple_repeat 2 48 0 420 299 108 5 chr17 9867332 9867546 -75570934 + MIR SINE MIR 8 243 -19 2391 107 0 0 chr17 9867889 9868199 -75570281 - AluSg SINE Alu 0 310 1 188 119 0 24 chr17 9868210 9868252 -75570228 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 211 278 0 0 chr17 9868337 9868409 -75570071 + A-rich Low_complexity Low_complexity 1 72 0 512 288 128 44 chr17 9868484 9869050 -75569430 + L1MC4a LINE L1 5320 5819 -302 1770 163 17 10 chr17 9869175 9869464 -75569016 - AluJo SINE Alu -21 291 1 22 35 0 0 chr17 9869470 9869499 -75568981 + AT_rich Low_complexity Low_complexity 1 29 0 387 125 8 125 chr17 9872072 9872159 -75566321 - L1MA8 LINE L1 -22 6269 6198 2180 95 58 0 chr17 9872159 9872279 -75566201 + AluSx SINE Alu 1 113 -199 420 20 0 0 chr17 9872279 9872328 -75566152 + (CA)n Simple_repeat Simple_repeat 2 50 0 2180 95 58 0 chr17 9872328 9872502 -75565978 + AluSx SINE Alu 113 312 0 387 125 8 125 chr17 9872502 9872534 -75565946 - L1MA8 LINE L1 -93 6198 6164 299 319 87 36 chr17 9872559 9872697 -75565783 + L2 LINE L2 3125 3269 -3 184 301 205 0 chr17 9872728 9872811 -75565669 - L2 LINE L2 -19 3253 3154 2414 48 0 34 chr17 9873088 9873414 -75565066 - AluY SINE Alu 0 316 1 282 319 88 9 chr17 9874219 9874332 -75564148 - MER5A DNA MER1_type -1 188 67 2445 85 0 10 chr17 9874461 9874768 -75563712 - AluY SINE Alu -6 305 2 611 245 80 11 chr17 9875034 9875222 -75563258 - MER112 DNA MER1_type 0 260 60 537 270 15 7 chr17 9875307 9875444 -75563036 - MIR3 SINE MIR -41 167 30 2502 81 0 0 chr17 9877187 9877485 -75560995 - AluSc SINE Alu -11 298 1 346 211 77 67 chr17 9877730 9877834 -75560646 - L2 LINE L2 -1 3271 3167 2227 96 0 0 chr17 9877883 9878216 -75560264 + AluY SINE Alu 1 333 0 1337 182 128 66 chr17 9878401 9878553 -75559927 - MER63B DNA MER1_type -630 432 291 1906 166 0 16 chr17 9878553 9878866 -75559614 + AluJo SINE Alu 1 308 -4 1337 182 128 66 chr17 9878866 9879120 -75559360 - MER63B DNA MER1_type -771 291 1 2057 131 6 38 chr17 9879720 9880040 -75558440 - AluSx SINE Alu -2 310 1 556 287 76 9 chr17 9880953 9881176 -75557304 + L1M4 LINE L1 4793 5030 -1116 223 250 10 104 chr17 9882799 9882895 -75555585 + L3 LINE CR1 1491 1577 0 3287 153 6 65 chr17 9882900 9883050 -75555430 - L1MB5 LINE L1 0 6174 6017 1459 187 35 81 chr17 9883050 9883217 -75555263 + MLT1B LTR MaLR 4 177 -213 1734 112 138 11 chr17 9883217 9883486 -75554994 + AluSg SINE Alu 1 303 -7 1459 187 35 81 chr17 9883486 9883724 -75554756 + MLT1B LTR MaLR 177 390 0 3287 153 6 65 chr17 9883724 9884266 -75554214 - L1MB5 LINE L1 -157 6017 5523 2310 86 3 0 chr17 9884607 9884899 -75553581 - AluSg SINE Alu -17 293 1 282 204 0 0 chr17 9885330 9885379 -75553101 + L2 LINE L2 3265 3313 0 188 259 0 69 chr17 9885365 9885423 -75553057 + MIR SINE MIR 91 144 -118 * 250 167 0 0 chr17 9886831 9886873 -75551607 + 5S rRNA rRNA 1 42 -79 2283 116 0 3 chr17 9886963 9887266 -75551214 + AluSx SINE Alu 1 302 -10 245 246 0 14 chr17 9887318 9887387 -75551093 + (TG)n Simple_repeat Simple_repeat 1 68 0 845 243 66 12 chr17 9887731 9887990 -75550490 - Charlie8 DNA MER1_type -2141 276 4 22 35 0 0 chr17 9888039 9888068 -75550412 + GC_rich Low_complexity Low_complexity 1 29 0 513 264 50 28 chr17 9888805 9888987 -75549493 + MIR SINE MIR 75 260 -2 23 68 0 0 chr17 9889071 9889115 -75549365 + AT_rich Low_complexity Low_complexity 1 44 0 186 294 206 0 chr17 9889388 9889514 -75548966 + MIR3 SINE MIR 46 197 -11 296 367 42 0 chr17 9890296 9890416 -75548064 + L2 LINE L2 2707 2831 -483 2071 116 0 50 chr17 9890681 9890984 -75547496 + AluSx SINE Alu 1 288 -24 439 160 13 0 chr17 9891057 9891132 -75547348 - L1MB7 LINE L1 -54 6130 6055 734 171 0 46 chr17 9891233 9891408 -75547072 - L1MB3 LINE L1 0 6183 6017 369 277 61 7 chr17 9891425 9891573 -75546907 - MIR3 SINE MIR -6 202 47 597 307 60 52 chr17 9892136 9892455 -75546025 + L1ME4a LINE L1 5514 5838 -283 2146 87 3 62 chr17 9892455 9892776 -75545704 + AluSp SINE Alu 1 302 -11 597 307 60 52 chr17 9892776 9892837 -75545643 + L1ME4a LINE L1 5838 5897 -224 1859 152 56 9 chr17 9892879 9893221 -75545259 + Tigger2 DNA MER2_type 2361 2718 0 2410 95 0 0 chr17 9893395 9893690 -75544790 + AluSg SINE Alu 1 295 -15 586 248 56 87 chr17 9894202 9894468 -75544012 - Charlie8 DNA MER1_type -2159 258 1 619 161 0 15 chr17 9894734 9894864 -75543616 + CT-rich Low_complexity Low_complexity 1 128 0 2140 120 3 7 chr17 9894864 9895156 -75543324 - AluSx SINE Alu -21 291 1 1754 174 14 17 chr17 9895217 9895505 -75542975 + AluJb SINE Alu 1 287 -25 2316 96 0 0 chr17 9895568 9895860 -75542620 + AluSg SINE Alu 1 292 -18 2504 76 3 13 chr17 9896467 9896782 -75541698 + AluSp SINE Alu 1 312 -1 493 158 278 0 chr17 9897104 9897237 -75541243 - MER5A DNA MER1_type -16 173 4 3845 97 3 15 chr17 9897357 9897384 -75541096 + L1PA13 LINE L1 5320 5346 -817 2476 86 0 3 chr17 9897384 9897685 -75540795 - AluSq SINE Alu -13 300 1 3845 97 3 15 chr17 9897685 9898245 -75540235 + L1PA13 LINE L1 5346 5900 -263 356 287 78 0 chr17 9898459 9898607 -75539873 - MIR SINE MIR -37 225 64 253 324 35 35 chr17 9898743 9898888 -75539592 + L2 LINE L2 3158 3302 -11 1109 177 13 44 chr17 9899573 9899799 -75538681 + MER20 DNA MER1_type 1 219 0 322 219 178 11 chr17 9899969 9900109 -75538371 - MIR3 SINE MIR -49 159 1 1200 187 9 27 chr17 9900403 9900628 -75537852 - MIR SINE MIR -31 231 11 329 217 87 11 chr17 9902012 9902104 -75536376 + MIR SINE MIR 30 128 -80 242 338 30 38 chr17 9902117 9902250 -75536230 - MER5A DNA MER1_type -6 183 52 373 204 135 9 chr17 9902868 9902985 -75535495 + MIR SINE MIR 18 149 -68 641 251 100 56 chr17 9902994 9903225 -75535255 - MIR SINE MIR -20 242 2 2349 112 0 0 chr17 9905172 9905475 -75533005 - AluSx SINE Alu -9 303 1 319 261 50 50 chr17 9905854 9905932 -75532548 + MIR SINE MIR 74 151 -111 301 292 23 46 chr17 9905932 9906062 -75532418 - MER5A DNA MER1_type 0 189 63 478 285 85 28 chr17 9906625 9906858 -75531622 - MIR SINE MIR -14 248 6 690 240 167 17 chr17 9907202 9907225 -75531255 + L1MC4 LINE L1 6683 6701 -1341 278 49 0 24 chr17 9907225 9907266 -75531214 + (CA)n Simple_repeat Simple_repeat 2 41 0 690 240 167 17 chr17 9907266 9907529 -75530951 + L1MC4 LINE L1 6701 7012 -1030 515 289 44 42 chr17 9907533 9908110 -75530370 + L1MD3 LINE L1 7074 7749 -246 * 1559 146 134 12 chr17 9908105 9908448 -75530032 + L1MB8 LINE L1 5784 6168 -10 744 222 21 7 chr17 9908573 9908717 -75529763 + FRAM SINE Alu 1 146 -30 449 244 88 66 chr17 9908720 9909065 -75529415 + L1MC5 LINE L1 7603 7917 -44 426 271 134 71 chr17 9909344 9909851 -75528629 + L2 LINE L2 2730 3270 -2 4321 69 21 0 chr17 9910113 9910678 -75527802 + L1PA8 LINE L1 5596 6172 0 2554 59 0 0 chr17 9910980 9911283 -75527197 - AluY SINE Alu -8 303 1 195 293 158 37 chr17 9911349 9911431 -75527049 + MIR SINE MIR 19 110 -98 771 210 0 36 chr17 9911698 9911865 -75526615 + FAM SINE Alu 1 161 -14 21 36 0 0 chr17 9912158 9912186 -75526294 + AT_rich Low_complexity Low_complexity 1 28 0 247 185 99 12 chr17 9912198 9912279 -75526201 - L1ME4a LINE L1 -13 6108 6021 714 237 40 6 chr17 9912282 9912459 -75526021 - MER20 DNA MER1_type 0 219 37 671 287 62 29 chr17 9912468 9912809 -75525671 - L1ME4a LINE L1 -90 6031 5680 462 305 24 42 chr17 9913303 9913470 -75525010 + MER5A DNA MER1_type 17 180 -9 296 164 0 14 chr17 9913790 9913863 -75524617 + (CAT)n Simple_repeat Simple_repeat 3 74 0 2218 92 0 7 chr17 9915333 9915616 -75522864 + AluSq SINE Alu 1 281 -32 230 0 33 0 chr17 9915618 9915648 -75522832 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 330 286 20 0 chr17 9915732 9915830 -75522650 + MER63 DNA MER1_type 27 752 -84 300 300 31 71 chr17 9915865 9916043 -75522437 + MIR SINE MIR 32 198 -62 901 117 0 36 chr17 9916100 9916237 -75522243 + FLAM_C SINE Alu 1 132 -1 1580 177 10 31 chr17 9916264 9916558 -75521922 + AluJb SINE Alu 1 288 -24 251 295 37 69 chr17 9917607 9918099 -75520381 + L1M4 LINE L1 2703 3178 -2968 2415 72 3 0 chr17 9918242 9918533 -75519947 - AluSx SINE Alu -14 298 7 2111 112 10 3 chr17 9920058 9920362 -75518118 + AluSq SINE Alu 1 306 -7 272 235 23 15 chr17 9920408 9920540 -75517940 + CT-rich Low_complexity Low_complexity 1 133 0 1011 228 37 0 chr17 9921930 9922171 -75516309 + L1MD3 LINE L1 7723 7972 -23 639 241 14 0 chr17 9922188 9922333 -75516147 - MER3 DNA MER1_type -62 147 1 1825 178 7 10 chr17 9922916 9923214 -75515266 + AluJb SINE Alu 1 297 -15 224 284 45 0 chr17 9923257 9923324 -75515156 - MIR3 SINE MIR -54 154 85 1396 168 40 94 chr17 9923373 9923670 -75514810 + AluJb SINE Alu 9 289 -23 323 213 12 38 chr17 9923675 9923755 -75514725 - HsTC2 DNA Tc2 -1813 85 8 1076 168 20 5 chr17 9923865 9924062 -75514418 - MER20 DNA MER1_type -2 217 18 280 242 0 0 chr17 9924126 9924188 -75514292 + MER103 DNA DNA 39 100 -66 39 0 0 0 chr17 9925040 9925079 -75513401 + AT_rich Low_complexity Low_complexity 1 39 0 293 250 33 0 chr17 9925255 9925347 -75513133 - HAL1b LINE L1 -428 920 826 445 295 68 53 chr17 9925652 9925859 -75512621 - L2 LINE L2 -41 3231 3022 409 304 138 12 chr17 9925921 9925995 -75512485 - L3 LINE CR1 -10 1567 1504 2101 142 3 0 chr17 9925995 9926305 -75512175 + AluSx SINE Alu 1 311 -1 409 304 138 12 chr17 9926305 9926470 -75512010 - L3 LINE CR1 -73 1504 1298 2261 92 3 0 chr17 9927480 9927880 -75510600 + AluSx SINE Alu 1 401 0 376 236 71 11 chr17 9927961 9928116 -75510364 - HAL1b LINE L1 -4 6117 1194 1960 160 0 3 chr17 9928195 9928488 -75509992 + AluJb SINE Alu 3 294 -18 2256 116 3 3 chr17 9928490 9928800 -75509680 + AluSx SINE Alu 1 310 -2 589 238 33 55 chr17 9928836 9929017 -75509463 + MIR SINE MIR 2 178 -84 422 308 14 28 chr17 9929148 9929291 -75509189 + MIR3 SINE MIR 45 185 -23 476 313 48 6 chr17 9929610 9929776 -75508704 + MIR SINE MIR 69 241 -21 612 248 130 36 chr17 9930619 9930950 -75507530 + LTR16A LTR ERVL 83 444 -6 198 0 0 0 chr17 9931869 9931891 -75506589 + (CAGGC)n Simple_repeat Simple_repeat 4 25 0 698 175 75 0 chr17 9932491 9932611 -75505869 + FLAM_A SINE Alu 1 129 -4 26 0 0 0 chr17 9932714 9932740 -75505740 + AT_rich Low_complexity Low_complexity 1 26 0 853 114 0 0 chr17 9933569 9933683 -75504797 + AluSg/x SINE Alu 180 293 -19 240 236 28 28 chr17 9933799 9933830 -75504650 - MIR SINE MIR -82 180 150 2262 76 48 3 chr17 9933830 9934120 -75504360 - AluY SINE Alu -8 303 1 240 236 28 28 chr17 9934120 9934160 -75504320 - MIR SINE MIR -111 151 109 470 217 58 25 chr17 9934326 9934446 -75504034 - L2 LINE L2 -2 3311 3188 825 277 84 28 chr17 9934576 9934743 -75503737 - L2 LINE L2 -126 3187 3031 1670 246 87 12 chr17 9934743 9934973 -75503507 - MLT1F LTR MaLR 0 542 331 2561 69 0 0 chr17 9934973 9935278 -75503202 + AluY SINE Alu 1 305 -6 1670 246 87 12 chr17 9935278 9935551 -75502929 - MLT1F LTR MaLR -211 331 1 825 277 84 28 chr17 9935551 9935740 -75502740 - L2 LINE L2 -282 3031 2811 410 196 10 8 chr17 9935754 9935858 -75502622 + MER5A DNA MER1_type 1 185 -4 372 290 117 42 chr17 9935859 9936073 -75502407 + MIR SINE MIR 14 243 -19 232 305 30 73 chr17 9936917 9937081 -75501399 + MER5A DNA MER1_type 3 159 -30 * 322 291 58 29 chr17 9936942 9937097 -75501383 - MER5A DNA MER1_type -6 172 7 38 22 0 0 chr17 9937548 9937593 -75500887 + AT_rich Low_complexity Low_complexity 1 45 0 7168 17 0 0 chr17 9937593 9938433 -75500047 - L1PA3 LINE L1 -4 6151 5312 * 11628 26 1 1 chr17 9938424 9939848 -75498632 + L1PA3 LINE L1 3899 5323 -823 438 274 20 68 chr17 9940464 9940610 -75497870 + L1MC/D LINE L1 5318 5456 -2352 312 288 194 29 chr17 9940685 9940855 -75497625 + L1MC/D LINE L1 5564 5761 -2047 3953 40 22 4 chr17 9941070 9941565 -75496915 + L1PA4 LINE L1 5652 6155 0 219 220 0 0 chr17 9941569 9941619 -75496861 + (TA)n Simple_repeat Simple_repeat 1 50 0 2437 88 0 3 chr17 9941619 9941925 -75496555 - AluSx SINE Alu -7 305 1 389 279 153 87 chr17 9941983 9942441 -75496039 + L1M4 LINE L1 4762 5249 -897 4081 198 62 5 chr17 9942445 9943258 -75495222 - MER21B LTR ERV1 -1 862 4 657 121 30 68 chr17 9943490 9943622 -75494858 + FLAM_C SINE Alu 17 143 0 188 188 42 0 chr17 9943663 9943711 -75494769 + GA-rich Low_complexity Low_complexity 5 54 0 2266 122 0 0 chr17 9944221 9944516 -75493964 + AluSx SINE Alu 1 295 -17 352 164 33 0 chr17 9944973 9945034 -75493446 - MER5A DNA MER1_type -1 188 126 1061 169 0 0 chr17 9945137 9945303 -75493177 - MER5A DNA MER1_type -23 166 1 313 233 67 8 chr17 9946294 9946414 -75492066 - L1ME4a LINE L1 0 6121 5995 239 237 102 0 chr17 9946557 9946616 -75491864 - MIR3 SINE MIR -22 186 122 1585 184 103 56 chr17 9947071 9947396 -75491084 - MLT1C LTR MaLR 0 467 114 4938 42 0 0 chr17 9947396 9947975 -75490505 - L1PA5 LINE L1 0 6154 5576 1585 184 103 56 chr17 9947975 9948095 -75490385 - MLT1C LTR MaLR -353 114 1 2205 98 0 0 chr17 9949715 9949990 -75488490 + AluSg SINE Alu 1 275 -35 192 40 0 0 chr17 9949991 9950016 -75488464 + (TC)n Simple_repeat Simple_repeat 2 26 0 450 293 0 0 chr17 9950020 9950187 -75488293 + (CATG)n Simple_repeat Simple_repeat 1 167 0 274 259 0 0 chr17 9950187 9950241 -75488239 + (TG)n Simple_repeat Simple_repeat 1 54 0 321 250 14 0 chr17 9950249 9950321 -75488159 - L1MCa LINE L1 -4358 2068 1996 * 339 211 56 0 chr17 9950294 9950365 -75488115 - L1MC4 LINE L1 -1339 6983 6909 486 279 32 7 chr17 9950513 9950667 -75487813 - Charlie8 DNA MER1_type -2206 211 54 180 333 0 0 chr17 9951198 9951246 -75487234 + L2 LINE L2 3189 3236 -77 2705 55 0 0 chr17 9951303 9951614 -75486866 - AluY SINE Alu 0 311 1 2423 84 3 6 chr17 9952328 9952639 -75485841 + AluSx SINE Alu 1 310 -2 2648 183 34 21 chr17 9952696 9953255 -75485225 - L1MB7 LINE L1 0 6184 5619 204 125 0 0 chr17 9953771 9953803 -75484677 + (CA)n Simple_repeat Simple_repeat 1 32 0 2754 3 7 3 chr17 9954024 9954322 -75484158 + AluYa5 SINE Alu 1 299 -12 894 135 14 14 chr17 9954545 9954686 -75483794 + FLAM_C SINE Alu 3 143 0 479 253 0 0 chr17 9954709 9954792 -75483688 + AluJb SINE Alu 135 217 -95 25 0 0 0 chr17 9954793 9954818 -75483662 + AT_rich Low_complexity Low_complexity 1 25 0 258 372 9 18 chr17 9955011 9955124 -75483356 + MIR SINE MIR 40 151 -57 2384 77 0 10 chr17 9955127 9955437 -75483043 - AluY SINE Alu -4 307 1 435 193 12 0 chr17 9955455 9955537 -75482943 - MER58A DNA MER1_type 0 224 142 1353 168 8 0 chr17 9955537 9955781 -75482699 - Tigger5 DNA MER2_type 0 2323 2078 346 181 108 12 chr17 9955777 9955860 -75482620 - Tigger5 DNA MER2_type -2232 91 1 * 724 199 7 27 chr17 9955860 9956006 -75482474 - MER58A DNA MER1_type 0 143 1 2498 70 7 0 chr17 9956680 9956980 -75481500 + AluSp SINE Alu 1 302 -11 2084 142 3 0 chr17 9957269 9957572 -75480908 - AluJb SINE Alu -8 304 1 1597 198 39 36 chr17 9957660 9957806 -75480674 + MLT1A1 LTR MaLR 6 150 -215 2477 81 0 3 chr17 9957806 9958116 -75480364 + AluY SINE Alu 1 309 -2 1597 198 39 36 chr17 9958116 9958328 -75480152 + MLT1A1 LTR MaLR 150 365 0 273 365 60 35 chr17 9959604 9959804 -75478676 + L2 LINE L2 3030 3234 -38 2195 92 0 7 chr17 9959858 9960167 -75478313 + AluSc SINE Alu 1 307 0 408 290 57 73 chr17 9960815 9961060 -75477420 + L2 LINE L2 3030 3270 -2 2537 63 0 0 chr17 9961089 9961389 -75477091 + AluY SINE Alu 1 300 -11 1455 143 39 130 chr17 9961480 9961640 -75476840 + AluJb SINE Alu 1 121 -191 1689 160 32 11 chr17 9961640 9961737 -75476743 + AluJb SINE Alu 24 117 -195 414 0 0 0 chr17 9961737 9961783 -75476697 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1689 160 32 11 chr17 9961783 9961967 -75476513 + AluJb SINE Alu 117 311 -1 1455 143 39 130 chr17 9961967 9962114 -75476366 + AluJb SINE Alu 121 280 -32 435 19 0 0 chr17 9962114 9962166 -75476314 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 2332 88 3 13 chr17 9962309 9962614 -75475866 - AluSx SINE Alu -10 302 1 1084 239 4 0 chr17 9962614 9962840 -75475640 + MER58B DNA MER1_type 115 341 0 357 347 75 6 chr17 9962969 9963142 -75475338 + L1MC4a LINE L1 5749 5933 -1875 2346 105 0 3 chr17 9965615 9965928 -75472552 + AluSx SINE Alu 1 312 0 255 281 37 0 chr17 9965947 9966029 -75472451 + L1ME4a LINE L1 6009 6093 -28 207 204 0 0 chr17 9966808 9966852 -75471628 + (CGTG)n Simple_repeat Simple_repeat 1 44 0 1983 145 17 3 chr17 9966961 9967258 -75471222 + AluJo SINE Alu 1 301 -11 203 343 96 30 chr17 9967496 9967694 -75470786 + MIR SINE MIR 40 250 -12 2115 196 86 10 chr17 9968320 9968819 -75469661 + L1MB5 LINE L1 5638 6174 0 2431 109 0 0 chr17 9968827 9969139 -75469341 + AluSx SINE Alu 1 312 0 332 269 141 51 chr17 9969562 9969718 -75468762 - MER91A DNA MER1_type -18 178 9 407 300 67 33 chr17 9969895 9970075 -75468405 - MIR SINE MIR -1 261 76 789 163 0 8 chr17 9970111 9970229 -75468251 + FLAM_C SINE Alu 6 123 -16 198 0 0 0 chr17 9970229 9970251 -75468229 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 275 174 81 70 chr17 9970639 9970725 -75467755 + MER5A DNA MER1_type 1 87 -102 182 282 90 51 chr17 9972130 9972208 -75466272 + L2 LINE L2 3153 3233 -39 393 22 0 0 chr17 9972208 9972254 -75466226 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 939 199 49 135 chr17 9972409 9972736 -75465744 + MLT1A1 LTR MaLR 1 292 -73 1221 163 65 108 chr17 9972736 9972864 -75465616 + AluJo SINE Alu 1 133 -179 2281 86 6 65 chr17 9972864 9973188 -75465292 - AluSc SINE Alu -4 305 1 1221 163 65 108 chr17 9973188 9973365 -75465115 + AluJo SINE Alu 133 293 -19 939 199 49 135 chr17 9973365 9973423 -75465057 + MLT1A1 LTR MaLR 292 353 -12 301 267 139 64 chr17 9973553 9973755 -75464725 + HAL1 LINE L1 945 1161 -1346 260 320 135 36 chr17 9974059 9974422 -75464058 + HAL1b LINE L1 309 707 -641 1879 180 7 0 chr17 9974557 9974862 -75463618 + AluSx SINE Alu 1 307 -5 372 191 176 37 chr17 9977425 9977561 -75460919 + MIR3 SINE MIR 20 174 -34 426 269 90 28 chr17 9979119 9979264 -75459216 + MIR3 SINE MIR 23 176 -32 2318 91 7 0 chr17 9979298 9979594 -75458886 - AluSx SINE Alu -14 298 1 375 290 219 0 chr17 9980275 9980430 -75458050 + MER5A DNA MER1_type 1 189 0 210 245 0 20 chr17 9981950 9981999 -75456481 + (CCCCAG)n Simple_repeat Simple_repeat 2 49 0 443 266 104 72 chr17 9982577 9982799 -75455681 + MIR SINE MIR 34 262 0 2064 156 84 57 chr17 9982862 9983061 -75455419 + L1MB3 LINE L1 5286 5478 -702 1958 143 31 3 chr17 9983061 9983355 -75455125 + AluSx SINE Alu 1 302 -10 2064 156 84 57 chr17 9983355 9983681 -75454799 + L1MB3 LINE L1 5478 5825 -355 1446 81 0 0 chr17 9983681 9983854 -75454626 - AluSg/x SINE Alu -8 302 130 1727 208 6 8 chr17 9983854 9984220 -75454260 + L1MB3 LINE L1 5819 6183 0 2218 128 0 3 chr17 9984385 9984689 -75453791 + AluSx SINE Alu 1 303 -9 477 264 29 21 chr17 9985042 9985182 -75453298 - MIR SINE MIR -16 246 106 2249 123 7 0 chr17 9985865 9986175 -75452305 + AluSx SINE Alu 1 312 0 2281 121 7 0 chr17 9987000 9987306 -75451174 + AluSg SINE Alu 1 308 -2 1170 170 33 37 chr17 9988377 9988618 -75449862 - Tigger2 DNA MER2_type -10 2708 2469 1671 147 12 78 chr17 9988618 9988952 -75449528 + AluJb SINE Alu 1 312 0 3805 165 42 8 chr17 9989022 9989743 -75448737 - Tigger2 DNA MER2_type -1973 745 1 2244 83 45 0 chr17 9989758 9990046 -75448434 + AluY SINE Alu 1 301 -10 2330 103 0 0 chr17 9990400 9990690 -75447790 + AluSx SINE Alu 1 290 -22 270 247 10 41 chr17 9990789 9990886 -75447594 + MER113 DNA MER1_type? 15 108 -413 2257 114 3 0 chr17 9991443 9991751 -75446729 + AluSg SINE Alu 2 310 0 624 62 0 0 chr17 9991756 9991837 -75446643 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 311 0 0 25 chr17 9991847 9991887 -75446593 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr17 9992937 9992972 -75445508 + AT_rich Low_complexity Low_complexity 1 35 0 2048 116 0 50 chr17 9993005 9993323 -75445157 + AluSx SINE Alu 1 302 -10 352 167 115 0 chr17 9993423 9993501 -75444979 + L2 LINE L2 3187 3273 -40 44 35 0 0 chr17 9994518 9994576 -75443904 + AT_rich Low_complexity Low_complexity 1 58 0 2559 77 0 0 chr17 9994595 9994905 -75443575 - AluY SINE Alu -1 310 1 357 127 79 0 chr17 9995011 9995074 -75443406 + L1ME4a LINE L1 6039 6106 -15 378 259 12 0 chr17 9995332 9995417 -75443063 - MIR3 SINE MIR -12 196 111 355 343 80 29 chr17 9996036 9996211 -75442269 + MIR SINE MIR 52 235 -27 357 308 9 0 chr17 10046400 10046507 -75391973 - MER5A DNA MER1_type -80 109 2 774 253 116 67 chr17 10046585 10046989 -75391491 - Charlie8 DNA MER1_type -1956 461 38 448 269 85 28 chr17 10048107 10048248 -75390232 + MER112 DNA MER1_type 1 149 -111 674 161 136 8 chr17 10048548 10048666 -75389814 + AluJo SINE Alu 3 135 -177 1731 196 0 0 chr17 10048666 10048978 -75389502 + AluJo SINE Alu 1 312 0 1153 37 7 0 chr17 10049043 10049179 -75389301 + AluY SINE Alu 1 137 -174 182 36 0 36 chr17 10049179 10049207 -75389273 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 6862 69 6 13 chr17 10049211 10050747 -75387733 + SVA Other Other 2 1411 0 1294 77 6 0 chr17 10050751 10050921 -75387559 + AluY SINE Alu 127 297 -14 242 308 84 9 chr17 10051261 10051368 -75387112 - MIR SINE MIR -128 134 20 344 304 32 38 chr17 10051566 10051724 -75386756 + MIR3 SINE MIR 46 202 -6 258 228 114 38 chr17 10052715 10052794 -75385686 + MIR3 SINE MIR 70 154 -54 905 233 0 0 chr17 10053109 10053285 -75385195 + L1ME LINE L1 5457 5632 -534 381 189 11 21 chr17 10053294 10053389 -75385091 + MER20 DNA MER1_type 3 96 -123 422 194 10 10 chr17 10054390 10054493 -75383987 + MER20 DNA MER1_type 117 219 0 2102 138 0 0 chr17 10054656 10054968 -75383512 + AluSx SINE Alu 1 312 0 207 204 0 0 chr17 10055719 10055768 -75382712 + (TG)n Simple_repeat Simple_repeat 1 49 0 807 236 166 78 chr17 10056812 10057294 -75381186 + MLT1K LTR MaLR 11 546 -42 1587 172 41 4 chr17 10057294 10057562 -75380918 - AluJo SINE Alu -21 291 14 807 236 166 78 chr17 10057562 10057608 -75380872 + MLT1K LTR MaLR 546 586 -2 1514 232 71 25 chr17 10057766 10058205 -75380275 - MLT1D LTR MaLR -33 472 14 2185 83 4 0 chr17 10058668 10058933 -75379547 - AluSp SINE Alu -47 266 1 783 178 0 15 chr17 10058954 10059089 -75379391 - FLAM_C SINE Alu 0 133 1 391 292 74 60 chr17 10059289 10059505 -75378975 + MIR SINE MIR 6 224 -38 2244 101 10 0 chr17 10059705 10059993 -75378487 - AluSg SINE Alu -19 291 1 2663 202 23 44 chr17 10060833 10060927 -75377553 - MER68 LTR ERV1 0 562 468 1951 131 3 31 chr17 10060927 10061217 -75377263 + AluJo SINE Alu 1 282 -30 2663 202 23 44 chr17 10061217 10061695 -75376785 - MER68 LTR ERV1 -94 468 2 298 284 73 0 chr17 10061740 10061849 -75376631 - L3 LINE CR1 -58 1519 1403 251 254 103 29 chr17 10061980 10062094 -75376386 - MIR3 SINE MIR -42 166 49 617 263 31 5 chr17 10062152 10062526 -75375954 + MER113 DNA MER1_type? 31 479 -42 2435 79 0 13 chr17 10062802 10063118 -75375362 - AluSx SINE Alu 0 312 1 531 65 39 0 chr17 10063349 10063426 -75375054 - MADE1 DNA Mariner 0 80 1 290 284 246 8 chr17 10063643 10063777 -75374703 + MIR SINE MIR 18 183 -79 244 287 0 43 chr17 10063978 10064072 -75374408 + Charlie8 DNA MER1_type 16 105 -2312 2221 106 33 0 chr17 10064097 10064212 -75374268 + AluSx SINE Alu 1 111 -201 207 0 0 0 chr17 10064212 10064235 -75374245 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2221 106 33 0 chr17 10064235 10064421 -75374059 + AluSx SINE Alu 111 312 0 361 224 102 0 chr17 10064524 10064622 -75373858 + MER5B DNA MER1_type 1 108 -70 183 139 0 0 chr17 10065346 10065382 -75373098 + (A)n Simple_repeat Simple_repeat 1 36 0 350 220 291 35 chr17 10065971 10066112 -75372368 + MER5A DNA MER1_type 12 188 -1 306 178 228 30 chr17 10066423 10066524 -75371956 - L2 LINE L2 -14 3299 3179 318 284 71 10 chr17 10067015 10067212 -75371268 + L1ME3A LINE L1 3403 3611 -2535 429 292 105 24 chr17 10067339 10067530 -75370950 + L1ME3A LINE L1 3808 3982 -2164 2280 118 3 0 chr17 10067530 10067834 -75370646 + AluSg SINE Alu 1 305 -5 429 292 105 24 chr17 10067834 10067974 -75370506 + L1ME3A LINE L1 3982 4166 -1980 1777 162 0 18 chr17 10067987 10068271 -75370209 + AluJo SINE Alu 21 299 -13 1703 175 0 11 chr17 10068271 10068534 -75369946 + AluSx SINE Alu 1 260 -52 593 192 8 51 chr17 10068560 10068925 -75369555 + GA-rich Low_complexity Low_complexity 1 349 0 234 184 0 0 chr17 10068925 10068963 -75369517 + A-rich Low_complexity Low_complexity 2 39 0 698 291 43 75 chr17 10069106 10069636 -75368844 + MER34 LTR ERV1 1 513 -29 413 264 196 43 chr17 10069712 10070201 -75368279 + HAL1 LINE L1 2 565 -1942 654 244 95 8 chr17 10070223 10070465 -75368015 + HAL1 LINE L1 1680 1942 -565 216 0 0 0 chr17 10070508 10070532 -75367948 + (TG)n Simple_repeat Simple_repeat 1 24 0 1943 160 0 0 chr17 10070532 10070846 -75367634 - AluJb SINE Alu 0 314 1 319 287 78 61 chr17 10070988 10071218 -75367262 + HAL1 LINE L1 2105 2338 -169 1272 152 14 38 chr17 10071221 10071431 -75367049 + AluJo SINE Alu 1 205 -107 317 302 70 0 chr17 10071437 10071523 -75366957 + HAL1 LINE L1 1779 1870 -637 419 198 0 0 chr17 10071526 10071607 -75366873 + AluJ/FRAM SINE Alu 216 296 -16 2640 138 99 22 chr17 10071730 10072293 -75366187 + MER4B LTR ERV1 1 903 0 4143 103 19 19 chr17 10072416 10073046 -75365434 + MER41B LTR ERV1 6 635 0 660 328 78 17 chr17 10073047 10073613 -75364867 + L1ME3A LINE L1 4475 5094 -1052 2366 81 0 7 chr17 10073613 10073908 -75364572 - AluSg SINE Alu -17 293 1 660 328 78 17 chr17 10073908 10074045 -75364435 + L1ME3A LINE L1 5094 5221 -925 703 317 111 17 chr17 10074051 10074629 -75363851 + L1ME3A LINE L1 5313 5944 -226 2420 240 66 21 chr17 10074838 10075619 -75362861 + L1ME1 LINE L1 5364 6332 -2 24 0 0 0 chr17 10075667 10075691 -75362789 + AT_rich Low_complexity Low_complexity 1 24 0 765 189 8 0 chr17 10075700 10075832 -75362648 + AluJo/FLAM SINE Alu 1 133 -169 1063 157 0 34 chr17 10075832 10075879 -75362601 + AluSg/x SINE Alu 134 181 -131 6006 0 0 0 chr17 10075879 10076515 -75361965 - LTR27 LTR ERV1 0 636 1 1063 157 0 34 chr17 10076515 10076645 -75361835 + AluSg/x SINE Alu 181 305 -7 281 218 127 45 chr17 10076776 10076886 -75361594 - MIR3 SINE MIR -9 199 81 2357 104 0 0 chr17 10076923 10077221 -75361259 - AluSq SINE Alu -15 298 1 299 245 20 20 chr17 10077594 10077692 -75360788 + LTR67 LTR ERVL 460 557 0 2573 59 0 28 chr17 10077856 10078176 -75360304 + AluY SINE Alu 1 311 0 466 304 145 5 chr17 10078188 10078402 -75360078 - MIR SINE MIR -6 256 13 1579 96 0 0 chr17 10080478 10080713 -75357767 + AluSg/x SINE Alu 84 318 0 2311 109 3 10 chr17 10081330 10081643 -75356837 + AluSx SINE Alu 1 311 -1 2281 98 0 3 chr17 10082340 10082637 -75355843 + AluSx SINE Alu 1 296 -16 266 262 37 13 chr17 10083185 10083273 -75355207 - MIR3 SINE MIR -50 158 68 234 238 85 55 chr17 10083458 10083622 -75354858 + L2 LINE L2 2537 2705 -609 1030 171 44 15 chr17 10083628 10083833 -75354647 + L1MB5 LINE L1 5925 6135 -39 2227 115 0 10 chr17 10083836 10084140 -75354340 - AluSc SINE Alu -8 301 1 1499 144 0 13 chr17 10084144 10084373 -75354107 - AluJb SINE Alu -20 292 67 863 295 169 16 chr17 10084439 10084937 -75353543 + L2 LINE L2 2728 3313 0 1640 203 119 43 chr17 10085048 10085517 -75352963 - MLT1D LTR MaLR 0 505 1 2114 79 79 0 chr17 10085750 10086028 -75352452 + AluSc SINE Alu 1 300 -9 279 337 88 33 chr17 10086800 10086912 -75351568 + MIR SINE MIR 1 128 -134 2490 87 0 0 chr17 10086912 10087222 -75351258 - AluY SINE Alu -1 310 1 279 337 88 33 chr17 10087222 10087290 -75351190 + MIR SINE MIR 128 191 -71 396 271 294 0 chr17 10087481 10087651 -75350829 + MIR SINE MIR 18 237 -25 455 72 188 0 chr17 10087846 10087915 -75350565 - AluJb SINE Alu -229 83 2 2147 93 61 0 chr17 10087998 10088276 -75350204 + AluSc SINE Alu 5 299 -10 230 290 0 0 chr17 10089300 10089369 -75349111 + MLT1K LTR MaLR 509 577 -11 189 102 122 20 chr17 10089994 10090043 -75348437 - L3 LINE CR1 -944 633 580 2358 97 0 0 chr17 10090216 10090514 -75347966 + AluSx SINE Alu 1 298 -14 2512 66 10 0 chr17 10091132 10091433 -75347047 + AluY SINE Alu 1 304 -7 250 271 157 50 chr17 10091472 10091612 -75346868 + MIR3 SINE MIR 27 181 -27 266 140 140 0 chr17 10093303 10093360 -75345120 + MLT1K LTR MaLR 378 442 -146 879 226 243 58 chr17 10093376 10093442 -75345038 - MLT1E LTR MaLR -2 591 538 848 155 0 0 chr17 10093442 10093571 -75344909 + FLAM_A SINE Alu 1 129 -4 879 226 243 58 chr17 10093571 10094003 -75344477 - MLT1E LTR MaLR -55 538 1 296 213 32 64 chr17 10094160 10094254 -75344226 + L2 LINE L2 570 660 -2654 240 35 0 0 chr17 10094660 10094689 -75343791 + (A)n Simple_repeat Simple_repeat 1 29 0 193 240 20 0 chr17 10095021 10095071 -75343409 + L2 LINE L2 764 814 -2500 341 290 0 0 chr17 10095086 10095179 -75343301 + MER5B DNA MER1_type 7 99 -79 319 227 0 53 chr17 10095432 10095507 -75342973 + MER5A DNA MER1_type 5 75 -114 1598 181 31 24 chr17 10095524 10095811 -75342669 + AluJb SINE Alu 1 289 -23 2376 98 0 13 chr17 10095998 10096313 -75342167 + AluSx SINE Alu 1 311 -1 1428 277 182 37 chr17 10096450 10097526 -75340954 + L2 LINE L2 1658 2889 -425 330 174 0 81 chr17 10097534 10097620 -75340860 - MER3 DNA MER1_type 0 209 131 640 248 47 0 chr17 10097815 10097964 -75340516 - MER3 DNA MER1_type -53 156 1 647 304 59 45 chr17 10097972 10098327 -75340153 + L2 LINE L2 2898 3257 -56 222 309 11 11 chr17 10098886 10098980 -75339500 + MER5B DNA MER1_type 8 101 -77 311 59 0 0 chr17 10099052 10099103 -75339377 - L1MA4A LINE L1 -275 6028 5978 1637 207 92 36 chr17 10099216 10099694 -75338786 + MLT1D LTR MaLR 1 505 0 710 184 26 33 chr17 10099736 10099888 -75338592 - LTR32 LTR ERVL 0 471 321 246 83 0 0 chr17 10099899 10099935 -75338545 - LTR32 LTR ERVL -119 352 317 239 111 0 0 chr17 10099942 10099978 -75338502 - LTR32 LTR ERVL -119 352 317 228 139 0 0 chr17 10100025 10100061 -75338419 - LTR32 LTR ERVL -119 352 317 259 83 0 0 chr17 10100106 10100142 -75338338 - LTR32 LTR ERVL -119 352 317 235 111 0 0 chr17 10100353 10100389 -75338091 - LTR32 LTR ERVL -119 352 317 2135 149 3 3 chr17 10100589 10100931 -75337549 - LTR32 LTR ERVL -122 349 8 367 164 15 0 chr17 10100944 10101011 -75337469 - MER46A DNA MER2_type -131 105 38 3115 144 16 134 chr17 10101052 10102090 -75336390 + L1MA4A LINE L1 4755 5685 -627 1027 104 0 8 chr17 10102091 10102225 -75336255 + AluSq/x SINE Alu 1 133 -179 2415 87 0 0 chr17 10102228 10102528 -75335952 + AluSg SINE Alu 1 300 -10 3330 140 27 27 chr17 10102529 10102921 -75335559 + L1MA4A LINE L1 5670 6064 -239 2275 108 0 20 chr17 10102921 10103226 -75335254 - AluSx SINE Alu -13 299 1 3330 140 27 27 chr17 10103226 10103467 -75335013 + L1MA4A LINE L1 6063 6303 0 1674 131 91 7 chr17 10103573 10103707 -75334773 + AluSx SINE Alu 1 122 -190 1997 122 4 0 chr17 10103707 10104014 -75334466 + AluY SINE Alu 1 308 0 1674 131 91 7 chr17 10104014 10104152 -75334328 + AluSx SINE Alu 122 297 -15 493 240 222 0 chr17 10104389 10104560 -75333920 - MER3 DNA MER1_type 0 209 1 2252 114 3 13 chr17 10104908 10105339 -75333141 + AluSp SINE Alu 1 428 0 712 337 10 24 chr17 10105611 10105902 -75332578 + L1MC/D LINE L1 5464 5750 -2058 1965 139 0 42 chr17 10106367 10106676 -75331804 - AluJb SINE Alu -10 302 7 333 0 0 0 chr17 10107151 10107188 -75331292 + (CA)n Simple_repeat Simple_repeat 1 37 0 219 133 0 0 chr17 10107472 10107517 -75330963 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 2120 127 0 13 chr17 10108483 10108782 -75329698 + AluSx SINE Alu 1 295 -17 972 270 179 59 chr17 10109148 10109421 -75329059 - L2 LINE L2 0 3313 3074 2653 159 50 10 chr17 10109421 10109905 -75328575 - MLT1D LTR MaLR -2 503 1 972 270 179 59 chr17 10109905 10110441 -75328039 - L2 LINE L2 -239 3074 2389 199 208 0 42 chr17 10110478 10110526 -75327954 - L2 LINE L2 -1000 2314 2269 2247 107 24 0 chr17 10110883 10111181 -75327299 + AluSx SINE Alu 1 305 -7 549 247 18 120 chr17 10111441 10111724 -75326756 - L2 LINE L2 0 3313 3060 208 194 0 0 chr17 10111838 10111874 -75326606 - L2 LINE L2 -98 3215 3180 2039 103 0 4 chr17 10112923 10113196 -75325284 + AluSq SINE Alu 41 312 -1 888 247 49 21 chr17 10113530 10113553 -75324927 + MIR SINE MIR 13 34 -228 2346 92 0 19 chr17 10113553 10113870 -75324610 + AluSx SINE Alu 1 311 -1 888 247 49 21 chr17 10113870 10114089 -75324391 + MIR SINE MIR 34 262 0 1999 157 0 6 chr17 10115275 10115587 -75322893 - AluJb SINE Alu -2 310 1 706 179 13 64 chr17 10115696 10115852 -75322628 - MER5A DNA MER1_type -40 149 2 190 273 0 0 chr17 10115852 10115896 -75322584 - L3b LINE CR1 -6 1577 1534 459 225 154 115 chr17 10117058 10117088 -75321392 + L1ME4a LINE L1 5551 5578 -543 2250 93 13 19 chr17 10117088 10117399 -75321081 + AluSx SINE Alu 1 309 -3 459 225 154 115 chr17 10117399 10117690 -75320790 + L1ME4a LINE L1 5578 5890 -231 2210 118 3 25 chr17 10117690 10118004 -75320476 + AluSq SINE Alu 1 307 -6 459 225 154 115 chr17 10118004 10118037 -75320443 + L1ME4a LINE L1 5890 5920 -201 623 197 0 16 chr17 10118773 10119097 -75319383 + (CA)n Simple_repeat Simple_repeat 1 318 0 367 198 135 27 chr17 10119268 10119379 -75319101 + MIR SINE MIR 19 141 -121 2341 76 33 13 chr17 10121073 10121377 -75317103 - AluY SINE Alu -1 310 1 4160 171 25 59 chr17 10121534 10121706 -75316774 + L1MB7 LINE L1 4863 5039 -1145 1768 179 6 22 chr17 10121706 10122018 -75316462 + AluJo SINE Alu 1 307 -5 4160 171 25 59 chr17 10122018 10122346 -75316134 + L1MB7 LINE L1 5039 5377 -807 2416 88 10 0 chr17 10122346 10122651 -75315829 + AluSg SINE Alu 1 308 -2 4160 171 25 59 chr17 10122651 10123486 -75314994 + L1MB7 LINE L1 5377 6176 -8 2374 104 3 0 chr17 10123795 10124102 -75314378 + AluSx SINE Alu 1 308 -4 367 340 0 15 chr17 10124106 10124355 -75314125 + (CATG)n Simple_repeat Simple_repeat 1 245 0 1995 121 35 7 chr17 10124938 10125227 -75313253 + AluSx SINE Alu 1 297 -15 396 212 35 18 chr17 10125539 10125569 -75312911 - MER46A DNA MER2_type -2552 179 151 2211 117 13 10 chr17 10125569 10125877 -75312603 - AluSx SINE Alu -3 309 1 2621 129 61 30 chr17 10125880 10126375 -75312105 - L1MA8 LINE L1 -1 6290 5781 396 212 35 18 chr17 10126375 10126453 -75312027 - MER46A DNA MER2_type -2581 150 65 2385 65 0 7 chr17 10126480 10126774 -75311706 - AluY SINE Alu -8 303 12 1365 158 57 11 chr17 10126774 10127029 -75311451 - L1MA8 LINE L1 -513 5778 5509 2247 186 22 52 chr17 10127058 10127291 -75311189 - MER66B LTR ERV1 0 486 248 2278 102 0 3 chr17 10127291 10127586 -75310894 - AluSc SINE Alu -15 294 1 2247 186 22 52 chr17 10127586 10127853 -75310627 - MER66B LTR ERV1 -238 248 1 1313 225 132 78 chr17 10128980 10129291 -75309189 + L2 LINE L2 2494 2787 -526 1745 156 31 10 chr17 10129291 10129580 -75308900 + AluJb SINE Alu 1 295 -17 1313 225 132 78 chr17 10129580 10129990 -75308490 + L2 LINE L2 2787 3275 -38 2288 121 0 3 chr17 10129990 10130295 -75308185 - AluSp SINE Alu -9 304 1 1313 225 132 78 chr17 10130295 10130331 -75308149 + L2 LINE L2 3275 3308 -5 2459 67 0 29 chr17 10130405 10130719 -75307761 - AluY SINE Alu -6 305 1 200 150 25 113 chr17 10130772 10130852 -75307628 - MIR SINE MIR -66 196 124 2231 81 0 14 chr17 10130937 10131259 -75307221 + AluSg SINE Alu 1 318 0 209 339 0 16 chr17 10131260 10131322 -75307158 - MIR3 SINE MIR -143 65 5 265 200 13 40 chr17 10131384 10131459 -75307021 + L1M4 LINE L1 3876 3948 -2198 301 274 128 39 chr17 10131673 10131852 -75306628 + L1M4 LINE L1 4333 4527 -1619 213 264 264 14 chr17 10131920 10132060 -75306420 - MIR SINE MIR -59 203 29 1724 249 169 9 chr17 10132097 10132622 -75305858 + MLT2F LTR ERVL 1 609 -54 1701 199 10 0 chr17 10132634 10132936 -75305544 + AluJb SINE Alu 1 305 -7 183 232 0 0 chr17 10132952 10133008 -75305472 + (TG)n Simple_repeat Simple_repeat 1 56 0 2227 73 17 0 chr17 10133622 10133909 -75304571 + AluY SINE Alu 1 292 -19 429 299 32 25 chr17 10134093 10134250 -75304230 + MIR SINE MIR 31 188 -74 2353 59 42 0 chr17 10134401 10134690 -75303790 + AluY SINE Alu 1 301 -10 2076 104 59 0 chr17 10134818 10135106 -75303374 - AluSx SINE Alu -7 305 1 1833 153 37 79 chr17 10135314 10135363 -75303117 + MLT1B LTR MaLR 1 51 -339 1989 110 0 38 chr17 10135363 10135653 -75302827 + AluSx SINE Alu 21 299 -13 1833 153 37 79 chr17 10135653 10135713 -75302767 + MLT1B LTR MaLR 51 112 -278 2210 119 0 3 chr17 10135713 10136015 -75302465 + AluSq SINE Alu 1 301 -12 1833 153 37 79 chr17 10136015 10136310 -75302170 + MLT1B LTR MaLR 112 389 -1 1949 162 7 13 chr17 10136994 10137302 -75301178 - AluJo SINE Alu -6 306 1 830 211 6 0 chr17 10138918 10139084 -75299396 + MER5A DNA MER1_type 14 180 -9 2224 38 94 0 chr17 10139157 10139423 -75299057 + AluY SINE Alu 1 291 -20 225 292 82 103 chr17 10140323 10140566 -75297914 + MIR SINE MIR 20 257 -5 2031 116 20 30 chr17 10140783 10141084 -75297396 + AluSg SINE Alu 1 298 -12 2445 73 3 0 chr17 10141084 10141384 -75297096 + AluY SINE Alu 1 301 -10 2239 135 0 0 chr17 10141545 10141857 -75296623 - AluSx SINE Alu 0 312 1 2925 174 30 29 chr17 10141986 10142582 -75295898 + L1MB7 LINE L1 5573 6169 -15 269 292 11 11 chr17 10142769 10142858 -75295622 + CT-rich Low_complexity Low_complexity 1 89 0 333 0 0 0 chr17 10142870 10142907 -75295573 + (CA)n Simple_repeat Simple_repeat 2 38 0 2233 113 3 3 chr17 10143042 10143343 -75295137 - AluSx SINE Alu -11 301 1 636 173 133 27 chr17 10143381 10143531 -75294949 + MIR SINE MIR 83 248 -14 764 194 0 0 chr17 10143630 10143754 -75294726 - FLAM_A SINE Alu -5 128 5 192 40 0 0 chr17 10143775 10143800 -75294680 + (TTTTTG)n Simple_repeat Simple_repeat 3 27 0 1715 185 0 4 chr17 10144009 10144290 -75294190 - AluJo SINE Alu -22 290 11 299 261 54 36 chr17 10144412 10144523 -75293957 - MLT1K LTR MaLR -6 582 470 246 283 91 17 chr17 10144901 10145022 -75293458 - MIR3 SINE MIR -37 171 69 1852 125 20 59 chr17 10145370 10145674 -75292806 + AluSx SINE Alu 1 292 -20 2220 88 3 60 chr17 10145676 10145995 -75292485 + AluSg SINE Alu 3 303 -7 472 241 28 57 chr17 10146085 10146226 -75292254 - MIR SINE MIR -40 222 86 1356 152 4 52 chr17 10146239 10146469 -75292011 + AluJo SINE Alu 1 219 -93 29 28 0 0 chr17 10146624 10146660 -75291820 + AT_rich Low_complexity Low_complexity 1 36 0 1885 176 0 16 chr17 10146673 10146979 -75291501 + AluJb SINE Alu 3 303 -9 719 138 0 125 chr17 10146985 10147137 -75291343 + AluJo SINE Alu 1 133 -169 213 276 53 79 chr17 10147144 10147220 -75291260 - MIR SINE MIR -188 74 1 387 0 0 0 chr17 10147368 10147411 -75291069 + (CA)n Simple_repeat Simple_repeat 2 44 0 2406 74 0 7 chr17 10147473 10147770 -75290710 - AluSx SINE Alu -17 295 1 788 228 112 0 chr17 10148205 10148402 -75290078 - MIR SINE MIR -40 222 4 353 314 55 27 chr17 10148960 10149180 -75289300 + LTR33 LTR ERVL 1 226 -295 870 195 0 74 chr17 10150315 10150458 -75288022 + AluJo SINE Alu 137 264 -48 2441 74 0 10 chr17 10150458 10150767 -75287713 - AluY SINE Alu -5 306 1 870 195 0 74 chr17 10150767 10150813 -75287667 + AluJo SINE Alu 264 312 0 851 164 0 8 chr17 10150818 10150952 -75287528 + FLAM_C SINE Alu 1 133 0 262 172 130 83 chr17 10151026 10151195 -75287285 + L1MC4 LINE L1 7865 8041 -1 1850 151 0 17 chr17 10151227 10151519 -75286961 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr17 10151520 10151552 -75286928 + (TA)n Simple_repeat Simple_repeat 2 33 0 1667 253 88 49 chr17 10151569 10152238 -75286242 + L1ME3A LINE L1 5433 6127 -43 1899 158 24 0 chr17 10152241 10152533 -75285947 - AluJb SINE Alu -13 299 1 881 143 0 0 chr17 10152534 10152660 -75285820 - AluJb SINE Alu -186 126 1 547 317 55 11 chr17 10152845 10153028 -75285452 - MIR3 SINE MIR -1 207 17 871 213 6 0 chr17 10153169 10153333 -75285147 - FAM SINE Alu -9 166 2 357 24 0 0 chr17 10153391 10153433 -75285047 + (CA)n Simple_repeat Simple_repeat 1 42 0 730 289 45 42 chr17 10153450 10153782 -75284698 - MLT1K LTR MaLR -71 517 185 2610 52 0 10 chr17 10154237 10154543 -75283937 + AluY SINE Alu 1 303 -8 1474 174 36 3 chr17 10155176 10155481 -75282999 + L1MB3 LINE L1 5869 6183 0 1986 106 3 51 chr17 10155568 10155880 -75282600 - AluSx SINE Alu -15 297 1 30 0 0 0 chr17 10155880 10155910 -75282570 + AT_rich Low_complexity Low_complexity 1 30 0 351 302 128 39 chr17 10156256 10156435 -75282045 + MIR SINE MIR 68 262 0 247 227 359 16 chr17 10156477 10156605 -75281875 - MER5B DNA MER1_type 0 178 7 2459 77 0 3 chr17 10156615 10156914 -75281566 + AluSc SINE Alu 1 298 -11 989 194 0 28 chr17 10156971 10157321 -75281159 + FAM SINE Alu 1 209 0 1190 45 0 0 chr17 10157321 10157454 -75281026 + AluSq/x SINE Alu 1 133 -180 2327 91 0 25 chr17 10157457 10157776 -75280704 + AluY SINE Alu 1 311 0 2099 142 3 3 chr17 10158466 10158775 -75279705 - AluJo SINE Alu -1 311 3 320 345 45 34 chr17 10158998 10159175 -75279305 - L1ME4a LINE L1 -94 6027 5849 2502 72 23 0 chr17 10159499 10159805 -75278675 - AluSp SINE Alu 0 313 1 506 103 20 178 chr17 10160111 10160162 -75278318 - FLAM_A SINE Alu -169 142 85 1887 165 0 0 chr17 10160162 10160453 -75278027 - AluJb SINE Alu -21 291 1 506 103 20 178 chr17 10160453 10160547 -75277933 - FLAM_A SINE Alu -226 85 20 315 273 30 56 chr17 10160550 10160748 -75277732 + L1MC4a LINE L1 5695 5887 -1921 1178 209 0 8 chr17 10160867 10161101 -75277379 - MER106A DNA MER1_type -4 232 1 2421 81 3 0 chr17 10161145 10161440 -75277040 + AluSg SINE Alu 1 296 -14 2102 99 35 3 chr17 10161450 10161732 -75276748 + AluSg SINE Alu 1 291 -19 2499 230 120 43 chr17 10162060 10163220 -75275260 + L2 LINE L2 2035 3311 -2 310 221 197 33 chr17 10164186 10164308 -75274172 + MIR SINE MIR 70 211 -51 316 237 158 36 chr17 10164892 10165031 -75273449 + L1MCa LINE L1 1163 1318 -5108 2329 165 33 26 chr17 10165351 10165811 -75272669 + L1MB5 LINE L1 5711 6173 -1 2401 83 0 0 chr17 10165941 10166242 -75272238 + AluY SINE Alu 1 301 -10 205 280 140 28 chr17 10166515 10166622 -75271858 - L2 LINE L2 -25 3288 3170 2573 65 0 0 chr17 10166865 10167174 -75271306 + AluY SINE Alu 1 309 -2 241 296 48 64 chr17 10167285 10167311 -75271169 - L2 LINE L2 -95 3218 3193 2031 132 3 3 chr17 10167311 10167600 -75270880 - AluJb SINE Alu -23 289 1 241 296 48 64 chr17 10167600 10167698 -75270782 - L2 LINE L2 -120 3193 3096 1496 157 57 4 chr17 10167785 10168047 -75270433 - MLT1B LTR MaLR 0 390 115 246 32 0 0 chr17 10168047 10168078 -75270402 + (TTAG)n Simple_repeat Simple_repeat 2 32 0 783 180 16 0 chr17 10168125 10168253 -75270227 - AluJb SINE Alu -181 131 2 567 146 45 9 chr17 10168257 10168367 -75270113 - MLT1B LTR MaLR -272 118 5 279 216 59 20 chr17 10218685 10218787 -75219693 + L1MC5 LINE L1 7826 7931 -30 1529 179 4 8 chr17 10218788 10219056 -75219424 + AluJo SINE Alu 1 267 -45 4165 128 11 22 chr17 10219204 10219749 -75218731 - MER41B LTR ERV1 0 635 97 2450 69 0 0 chr17 10219749 10220054 -75218426 + AluY SINE Alu 1 305 -6 4165 128 11 22 chr17 10220054 10220150 -75218330 - MER41B LTR ERV1 -538 97 1 1225 128 41 0 chr17 10220517 10220713 -75217767 - LTR54 LTR ERV1 0 510 307 2018 118 0 19 chr17 10220716 10221029 -75217451 + AluSx SINE Alu 1 307 -5 1301 113 77 31 chr17 10221029 10221040 -75217440 - LTR54 LTR ERV1 -269 241 232 1558 159 20 33 chr17 10221040 10221342 -75217138 + AluJo SINE Alu 1 298 -14 1301 113 77 31 chr17 10221342 10221552 -75216928 - LTR54 LTR ERV1 -278 232 10 2219 88 3 7 chr17 10221647 10221942 -75216538 + AluSp SINE Alu 1 294 -19 2115 108 3 3 chr17 10222638 10222945 -75215535 - AluSx SINE Alu -5 307 1 287 331 129 7 chr17 10223111 10223250 -75215230 - MER5B DNA MER1_type -18 160 5 323 297 155 7 chr17 10223261 10223352 -75215128 - MER5B DNA MER1_type 0 178 102 1847 163 0 0 chr17 10223352 10223659 -75214821 - AluSx SINE Alu -5 307 1 323 297 155 7 chr17 10223659 10223722 -75214758 - MER5B DNA MER1_type -76 102 1 2092 93 0 59 chr17 10224304 10224625 -75213855 - AluSx SINE Alu -2 310 9 782 183 0 0 chr17 10225066 10225186 -75213294 - FLAM_A SINE Alu -13 120 1 2282 92 0 0 chr17 10225190 10225493 -75212987 - AluSc SINE Alu -6 303 1 1745 207 20 17 chr17 10225498 10225851 -75212629 - MLT1F LTR MaLR -62 480 127 1152 113 0 0 chr17 10225854 10226013 -75212467 - AluSp SINE Alu -18 295 137 575 225 17 8 chr17 10226022 10226142 -75212338 - MLT1F LTR MaLR -417 125 5 313 311 19 9 chr17 10226169 10226275 -75212205 + MER91A DNA MER1_type 6 112 -84 2164 97 0 0 chr17 10226303 10226593 -75211887 - AluSc SINE Alu -9 300 11 543 309 122 61 chr17 10226671 10227115 -75211365 - MLT1K LTR MaLR -8 580 110 1099 73 9 23 chr17 10227164 10227383 -75211097 + (GAAA)n Simple_repeat Simple_repeat 2 217 0 1414 195 51 48 chr17 10227476 10227871 -75210609 + MSTD LTR MaLR 1 396 0 1694 134 21 25 chr17 10228161 10228445 -75210035 - AluJo SINE Alu -19 293 11 2011 118 3 0 chr17 10228552 10228839 -75209641 + AluSx SINE Alu 5 292 -20 2213 97 3 0 chr17 10229152 10229450 -75209030 + AluSp SINE Alu 2 300 -13 309 135 0 19 chr17 10229677 10229729 -75208751 - MADE1 DNA Mariner 0 80 30 2185 100 3 3 chr17 10230035 10230346 -75208134 + AluSp SINE Alu 1 311 -2 303 240 48 39 chr17 10230444 10230522 -75207958 - MER113 DNA MER1_type? -414 107 31 2090 184 15 90 chr17 10230522 10230841 -75207639 - MLT1D LTR MaLR -2 503 240 243 0 0 0 chr17 10230847 10230874 -75207606 + (TG)n Simple_repeat Simple_repeat 2 28 0 1675 127 94 0 chr17 10230874 10231142 -75207338 - AluSx SINE Alu -5 307 11 2090 184 15 90 chr17 10231142 10231366 -75207114 - MLT1D LTR MaLR -265 240 1 303 240 48 39 chr17 10231366 10231391 -75207089 - MER113 DNA MER1_type? -490 31 3 2268 87 0 7 chr17 10231544 10231853 -75206627 + AluSc SINE Alu 3 309 0 246 323 75 30 chr17 10233322 10233455 -75205025 + MIR3 SINE MIR 3 141 -67 1881 184 52 0 chr17 10233516 10233863 -75204617 - MLT1A1 LTR MaLR 0 365 1 1813 154 0 0 chr17 10233938 10234217 -75204263 - AluSx SINE Alu -29 283 5 370 263 70 0 chr17 10234843 10234957 -75203523 + Charlie8 DNA MER1_type 52 173 -2244 * 660 143 9 36 chr17 10234955 10235067 -75203413 - Charlie3 DNA MER1_type -2601 109 1 346 287 9 9 chr17 10235072 10235187 -75203293 - L2 LINE L2 -654 2660 2546 2227 90 10 3 chr17 10235191 10235502 -75202978 + AluSp SINE Alu 1 313 0 2113 105 3 6 chr17 10235906 10236219 -75202261 - AluSx SINE Alu 0 312 1 232 304 179 9 chr17 10236223 10236335 -75202145 + L2 LINE L2 2924 3054 -218 575 192 128 0 chr17 10236408 10236533 -75201947 + MER96 DNA MER1_type? 35 175 0 2070 94 3 7 chr17 10237251 10237538 -75200942 - AluSx SINE Alu -26 286 1 439 271 63 58 chr17 10237541 10237576 -75200904 + L2 LINE L2 3106 3139 -174 2173 124 27 43 chr17 10237576 10237733 -75200747 + THE1B LTR MaLR 1 159 -205 2079 78 0 0 chr17 10237733 10238004 -75200476 - AluY SINE Alu -2 309 39 2173 124 27 43 chr17 10238004 10238216 -75200264 + THE1B LTR MaLR 159 364 0 439 271 63 58 chr17 10238216 10238387 -75200093 + L2 LINE L2 3139 3313 0 763 272 195 43 chr17 10238534 10239042 -75199438 + MLT1G1 LTR MaLR 11 595 0 754 159 8 45 chr17 10239076 10239208 -75199272 + FLAM_C SINE Alu 1 127 -6 296 315 99 33 chr17 10240191 10240372 -75198108 + MIR SINE MIR 32 224 -38 224 226 97 32 chr17 10240372 10240434 -75198046 + MIR SINE MIR 120 185 -77 1665 146 48 3 chr17 10240515 10240633 -75197847 + AluSx SINE Alu 1 112 -200 441 0 0 0 chr17 10240633 10240682 -75197798 + (CA)n Simple_repeat Simple_repeat 2 50 0 1665 146 48 3 chr17 10240682 10240857 -75197623 + AluSx SINE Alu 112 307 -5 579 236 93 80 chr17 10240959 10241184 -75197296 - MLT1L LTR MaLR -174 392 110 707 230 16 47 chr17 10241341 10241448 -75197032 - MIR SINE MIR -10 252 152 1995 104 35 0 chr17 10241448 10241736 -75196744 - AluSp SINE Alu -15 298 1 707 230 16 47 chr17 10241736 10241819 -75196661 - MIR SINE MIR -110 152 68 1632 53 0 19 chr17 10242703 10242912 -75195568 + AluY SINE Alu 97 301 -10 2002 111 3 29 chr17 10243184 10243490 -75194990 - AluSx SINE Alu -14 298 1 445 190 49 33 chr17 10243497 10243644 -75194836 - MER106B DNA MER1_type -82 977 3 1136 214 120 79 chr17 10243670 10243798 -75194682 - MLT1A1 LTR MaLR -2 363 242 2093 104 7 3 chr17 10243798 10244096 -75194384 + AluSq SINE Alu 1 299 -14 1136 214 120 79 chr17 10244096 10244309 -75194171 - MLT1A1 LTR MaLR -123 242 8 1031 242 133 32 chr17 10244473 10244812 -75193668 - MLT1E LTR MaLR 0 593 221 248 257 0 27 chr17 10244820 10244894 -75193586 + GA-rich Low_complexity Low_complexity 1 72 0 306 215 194 32 chr17 10244921 10245014 -75193466 - MLT1F LTR MaLR -466 76 3 2226 89 0 16 chr17 10245291 10245605 -75192875 - AluY SINE Alu 0 311 3 568 281 111 38 chr17 10245763 10245998 -75192482 + MIR SINE MIR 8 259 -3 572 339 27 14 chr17 10246172 10246393 -75192087 - MIR SINE MIR -11 251 28 458 220 135 64 chr17 10246908 10246959 -75191521 - LTR67 LTR ERVL -2 555 509 2231 112 0 0 chr17 10246959 10247262 -75191218 + AluSx SINE Alu 1 303 -9 458 220 135 64 chr17 10247262 10247351 -75191129 - LTR67 LTR ERVL -48 509 405 1563 177 50 0 chr17 10247412 10247695 -75190785 + AluJb SINE Alu 1 297 -15 307 202 79 11 chr17 10247696 10247785 -75190695 + L1MC5 LINE L1 7755 7849 -112 554 218 65 0 chr17 10247840 10247964 -75190516 + L1PB4 LINE L1 6022 6153 -3 3510 160 10 42 chr17 10247985 10248692 -75189788 - L1MB8 LINE L1 -6 6172 5489 25 0 0 0 chr17 10248696 10248721 -75189759 + AT_rich Low_complexity Low_complexity 1 25 0 1770 115 4 0 chr17 10248760 10249013 -75189467 - AluSx SINE Alu -17 295 42 4896 160 51 13 chr17 10249023 10250183 -75188297 - L1MB4 LINE L1 -38 6142 4930 2037 142 3 0 chr17 10250242 10250553 -75187927 + AluSx SINE Alu 1 312 0 415 249 54 95 chr17 10250672 10250893 -75187587 - MLT1J LTR MaLR -71 440 229 2473 55 6 10 chr17 10250986 10251298 -75187182 - AluY SINE Alu 0 311 1 502 246 47 47 chr17 10251504 10251698 -75186782 - Charlie8 DNA MER1_type -2233 184 1 774 247 114 0 chr17 10251709 10251936 -75186544 + L3 LINE CR1 1237 1489 -88 187 261 22 0 chr17 10251931 10251977 -75186503 + MIR3 SINE MIR 159 205 -3 * 774 234 35 0 chr17 10252334 10252505 -75185975 + MER45A DNA AcHobo 1 177 -1 1436 172 0 30 chr17 10252559 10252827 -75185653 - AluJb SINE Alu -37 275 16 1276 148 122 130 chr17 10253034 10253102 -75185378 - MLT1A2 LTR MaLR 0 374 307 2105 138 0 0 chr17 10253102 10253414 -75185066 - AluSx SINE Alu 0 312 1 1276 148 122 130 chr17 10253414 10253722 -75184758 - MLT1A2 LTR MaLR -67 307 1 1243 196 191 45 chr17 10253846 10254245 -75184235 + MSTB2 LTR MaLR 1 457 0 2206 112 0 0 chr17 10254388 10254693 -75183787 - AluSc SINE Alu -4 305 1 2310 106 0 25 chr17 10254733 10255070 -75183410 - AluSx SINE Alu 0 329 1 208 65 0 0 chr17 10255070 10255083 -75183397 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 234 0 0 0 chr17 10255210 10255236 -75183244 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1133 280 122 48 chr17 10255723 10256248 -75182232 + MLT1K LTR MaLR 2 565 -23 2190 119 10 6 chr17 10256300 10256683 -75181797 + AluSq SINE Alu 1 384 0 509 315 93 14 chr17 10257374 10257590 -75180890 - MIR SINE MIR -27 235 3 269 211 0 67 chr17 10257624 10257714 -75180766 - L1ME4a LINE L1 -207 5914 5831 472 220 151 5 chr17 10257716 10257902 -75180578 - L1MC5 LINE L1 -35 7926 7714 549 205 153 95 chr17 10258169 10258318 -75180162 - MER3 DNA MER1_type 0 209 45 1991 155 0 13 chr17 10258318 10258634 -75179846 - AluJb SINE Alu 0 312 1 549 205 153 95 chr17 10258634 10258674 -75179806 - MER3 DNA MER1_type -164 45 9 1539 166 111 31 chr17 10259919 10260280 -75178200 - MLT1F LTR MaLR 0 542 169 514 237 26 46 chr17 10260681 10260833 -75177647 - MLT1F LTR MaLR -393 149 1 329 283 54 24 chr17 10260990 10261156 -75177324 - L1ME4a LINE L1 0 6121 5951 606 250 8 0 chr17 10261177 10261309 -75177171 - FLAM_A SINE Alu 0 133 1 21 71 0 0 chr17 10261507 10261549 -75176931 + AT_rich Low_complexity Low_complexity 1 42 0 2345 100 0 3 chr17 10261711 10262020 -75176460 - AluSx SINE Alu -4 308 1 1535 189 70 0 chr17 10262044 10262158 -75176322 + AluJb SINE Alu 2 107 -205 399 41 0 0 chr17 10262158 10262207 -75176273 + (CA)n Simple_repeat Simple_repeat 2 50 0 1535 189 70 0 chr17 10262207 10262362 -75176118 + AluJb SINE Alu 107 290 -22 26 50 0 0 chr17 10262386 10262426 -75176054 + AT_rich Low_complexity Low_complexity 1 40 0 1783 142 0 1 chr17 10262563 10262605 -75175875 - L1P4 LINE L1 -464 5702 5661 2145 114 10 3 chr17 10262605 10262903 -75175577 - AluSx SINE Alu -12 300 1 1783 142 0 1 chr17 10262903 10263170 -75175310 - L1P4 LINE L1 -505 5661 5394 576 294 46 40 chr17 10263166 10263294 -75175186 - L1ME4a LINE L1 -219 5951 5825 * 2245 89 3 33 chr17 10263294 10263598 -75174882 - AluSg SINE Alu -15 295 1 576 294 46 40 chr17 10263598 10263772 -75174708 - L1ME4a LINE L1 -345 5825 5647 460 254 0 9 chr17 10263784 10263898 -75174582 - MER5B DNA MER1_type -15 163 51 885 147 0 0 chr17 10263919 10264048 -75174432 - FLAM_C SINE Alu -4 129 1 2337 104 3 0 chr17 10264076 10264383 -75174097 + AluSp SINE Alu 1 308 -5 6594 42 0 89 chr17 10264389 10265314 -75173166 + L1PA7 LINE L1 5312 6154 0 2050 102 11 18 chr17 10265338 10265622 -75172858 + AluSx SINE Alu 1 282 -30 452 283 170 22 chr17 10265672 10265853 -75172627 - L1ME4a LINE L1 -490 5672 5464 197 298 250 0 chr17 10267057 10267161 -75171319 + MIR SINE MIR 132 261 -1 23 33 0 0 chr17 10267162 10267192 -75171288 + AT_rich Low_complexity Low_complexity 1 30 0 577 245 0 14 chr17 10267234 10267373 -75171107 + L2 LINE L2 3176 3312 -1 818 263 84 20 chr17 10267447 10267838 -75170642 + L1ME4a LINE L1 5704 6119 -2 887 199 48 15 chr17 10267992 10268198 -75170282 - LTR67 LTR ERVL 0 557 345 622 275 17 0 chr17 10268266 10268444 -75170036 + MER5A DNA MER1_type 9 189 0 2099 144 0 16 chr17 10268512 10268857 -75169623 + AluSx SINE Alu 2 312 0 258 253 16 134 chr17 10268882 10269068 -75169412 - LTR67 LTR ERVL -387 170 7 475 310 6 44 chr17 10269133 10269220 -75169260 + L1ME4a LINE L1 4976 5065 -1081 2305 96 0 32 chr17 10269220 10269532 -75168948 - AluSq SINE Alu -11 302 1 475 310 6 44 chr17 10269532 10269805 -75168675 + L1ME4a LINE L1 5065 5322 -824 593 174 65 76 chr17 10269817 10269868 -75168612 - MLT1F1 LTR MaLR 0 567 517 1783 176 6 29 chr17 10269868 10270181 -75168299 - AluJo SINE Alu -6 306 1 593 174 65 76 chr17 10270181 10270313 -75168167 - MLT1F1 LTR MaLR -50 517 386 521 205 113 51 chr17 10270421 10270616 -75167864 + L1ME4a LINE L1 5522 5728 -393 2555 77 0 0 chr17 10270726 10271036 -75167444 + AluY SINE Alu 1 310 -1 238 224 45 83 chr17 10271050 10271159 -75167321 + L1ME4a LINE L1 5961 6064 -57 2484 87 0 3 chr17 10271159 10271468 -75167012 - AluSx SINE Alu -4 308 1 238 224 45 83 chr17 10271468 10271514 -75166966 + L1ME4a LINE L1 6064 6110 -11 402 327 53 19 chr17 10271687 10271950 -75166530 + L3 LINE CR1 1128 1399 -178 256 244 39 13 chr17 10271973 10272051 -75166429 - LTR67 LTR ERVL -2 555 476 2194 103 0 3 chr17 10272309 10272599 -75165881 - AluSg SINE Alu -21 289 1 205 256 0 0 chr17 10273499 10273542 -75164938 - L2 LINE L2 -22 3291 3249 726 245 67 114 chr17 10273546 10274011 -75164469 - LTR67 LTR ERVL -7 550 108 287 308 70 2 chr17 10274112 10274260 -75164220 - MIR SINE MIR -61 147 21 203 179 89 0 chr17 10274292 10274348 -75164132 - MIR SINE MIR -83 179 119 2473 111 5 45 chr17 10274509 10274724 -75163756 - THE1B LTR MaLR 0 364 169 2158 82 54 7 chr17 10274724 10275004 -75163476 + AluY SINE Alu 1 293 -18 2473 111 5 45 chr17 10275004 10275167 -75163313 - THE1B LTR MaLR -195 169 1 268 326 20 34 chr17 10275940 10276087 -75162393 + L2 LINE L2 2937 3081 -191 1656 185 24 0 chr17 10276465 10276752 -75161728 - AluJb SINE Alu -18 294 1 185 224 121 0 chr17 10276753 10276811 -75161669 - MIR SINE MIR -83 179 115 2574 77 0 0 chr17 10277052 10277363 -75161117 + AluY SINE Alu 1 311 0 465 206 0 0 chr17 10277621 10277728 -75160752 + (TGGA)n Simple_repeat Simple_repeat 4 110 0 2356 106 0 0 chr17 10278356 10278658 -75159822 - AluSx SINE Alu -10 302 1 552 242 88 33 chr17 10279081 10279343 -75159137 + MLT1L LTR MaLR 71 451 -164 1506 178 70 7 chr17 10279352 10279638 -75158842 + AluJo SINE Alu 1 304 -8 705 141 27 7 chr17 10279639 10279788 -75158692 + GA-rich Low_complexity Low_complexity 4 155 0 2318 110 3 0 chr17 10279796 10280105 -75158375 + AluSp SINE Alu 1 310 -3 261 237 40 13 chr17 10280155 10280231 -75158249 + MLT1L LTR MaLR 537 614 -1 2000 156 0 3 chr17 10280373 10280675 -75157805 - AluJb SINE Alu -11 301 1 1711 189 0 25 chr17 10280721 10281038 -75157442 - AluJo SINE Alu -3 309 1 552 214 8 8 chr17 10281144 10281270 -75157210 + L2 LINE L2 3188 3313 0 557 218 16 0 chr17 10281986 10282110 -75156370 - MIR SINE MIR -11 251 126 296 182 0 61 chr17 10282117 10282183 -75156297 - L2 LINE L2 -7 3306 3245 2118 110 7 26 chr17 10282204 10282512 -75155968 - AluSx SINE Alu -10 302 1 317 278 211 0 chr17 10283593 10283773 -75154707 + MIR SINE MIR 31 248 -14 1592 134 50 64 chr17 10284750 10284943 -75153537 - AluJb SINE Alu -5 307 118 2757 33 0 0 chr17 10284943 10285250 -75153230 + AluY SINE Alu 1 307 -4 1592 134 50 64 chr17 10285250 10285339 -75153141 - AluJb SINE Alu -194 118 29 222 174 0 0 chr17 10285428 10285474 -75153006 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 216 174 43 0 chr17 10285594 10285640 -75152840 + A-rich Low_complexity Low_complexity 2 49 0 294 84 37 19 chr17 10286186 10286248 -75152232 + L1MB2 LINE L1 6012 6074 -106 382 278 6 81 chr17 10286658 10286831 -75151649 - HAL1b LINE L1 -436 912 753 573 88 36 146 chr17 10286855 10286904 -75151576 - L1MB3 LINE L1 -11 6172 6119 2168 131 3 0 chr17 10286904 10287209 -75151271 - AluSx SINE Alu -6 306 1 573 88 36 146 chr17 10287209 10287296 -75151184 - L1MB3 LINE L1 -64 6119 6051 371 202 24 4 chr17 10287303 10287387 -75151093 + AluJo SINE Alu 1 56 -246 852 181 0 0 chr17 10287387 10287514 -75150966 - AluJb SINE Alu -55 257 131 1520 148 12 0 chr17 10287515 10287758 -75150722 + AluJo SINE Alu 66 311 -1 4086 170 27 29 chr17 10287765 10288908 -75149572 - L1MB3 LINE L1 -172 6011 4865 1798 154 73 20 chr17 10288908 10289264 -75149216 - THE1C LTR MaLR 0 375 1 4086 170 27 29 chr17 10289264 10289483 -75148997 - L1MB3 LINE L1 -1318 4865 4647 1844 186 112 23 chr17 10289599 10290028 -75148452 - MLT1C LTR MaLR 0 467 1 580 263 116 17 chr17 10290279 10290511 -75147969 + MIR SINE MIR 5 259 -3 1865 156 20 3 chr17 10290639 10290941 -75147539 - AluSq SINE Alu -6 307 1 286 227 0 13 chr17 10290946 10291021 -75147459 - L1MB3 LINE L1 -1460 4686 4613 291 182 0 0 chr17 10291021 10291098 -75147382 + GA-rich Low_complexity Low_complexity 2 78 0 374 221 115 25 chr17 10291125 10291247 -75147233 - L1MB3 LINE L1 -1526 4620 4488 921 174 79 0 chr17 10291509 10291687 -75146793 + LTR47A LTR ERVL 261 452 0 246 279 12 47 chr17 10291698 10291870 -75146610 - L1MB3 LINE L1 -1674 4472 4307 1683 171 0 45 chr17 10291886 10292195 -75146285 + AluJb SINE Alu 1 295 -17 1346 199 4 4 chr17 10292212 10292478 -75146002 - L1MD3 LINE L1 -1 7994 7729 1950 240 66 31 chr17 10292518 10293217 -75145263 - L1MB3 LINE L1 -1870 4276 3554 2450 87 3 0 chr17 10293258 10293567 -75144913 + AluSp SINE Alu 1 310 -3 1458 162 46 18 chr17 10294333 10294660 -75143820 - Charlie1 DNA MER1_type -6 2755 2420 1811 83 21 0 chr17 10294668 10294909 -75143571 - L1P4 LINE L1 -347 5819 5574 908 133 8 0 chr17 10294910 10295038 -75143442 - AluSq/x SINE Alu -184 129 1 5523 185 6 42 chr17 10295038 10295994 -75142486 - L1 LINE L1 -1890 4256 3350 1405 102 15 5 chr17 10295994 10296200 -75142280 - L1PB2 LINE L1 -1 6150 5943 5523 185 6 42 chr17 10296200 10296448 -75142032 - L1 LINE L1 -2796 3350 3095 201 278 69 0 chr17 10296455 10296527 -75141953 - L3 LINE CR1 -191 1386 1310 1043 176 11 0 chr17 10296536 10296723 -75141757 + MER5A DNA MER1_type 1 189 0 202 103 0 0 chr17 10296734 10296763 -75141717 - MER5C DNA MER1_type -4 320 292 2354 102 3 3 chr17 10296903 10297216 -75141264 + AluSq SINE Alu 1 313 0 331 272 39 10 chr17 10297222 10297325 -75141155 - MER5C DNA MER1_type -214 110 5 373 198 35 0 chr17 10297395 10297488 -75140992 - MER5A DNA MER1_type -89 100 4 378 274 33 26 chr17 10297497 10297650 -75140830 - L3 LINE CR1 -266 1311 1158 615 266 55 10 chr17 10298648 10298847 -75139633 + MIR SINE MIR 49 256 -6 2163 120 16 45 chr17 10299236 10299611 -75138869 + THE1B LTR MaLR 1 364 0 1031 249 99 78 chr17 10300340 10300765 -75137715 + MLT1K LTR MaLR 94 527 -61 2255 99 0 0 chr17 10301026 10301328 -75137152 - AluSx SINE Alu 0 302 1 2018 188 53 2 chr17 10301389 10301804 -75136676 + MER63B DNA MER1_type 1 436 0 909 226 157 63 chr17 10302101 10302143 -75136337 - LTR33 LTR ERVL 0 521 484 2173 116 162 8 chr17 10302143 10302514 -75135966 - MSTA LTR MaLR 0 428 1 909 226 157 63 chr17 10302514 10302931 -75135549 - LTR33 LTR ERVL -37 484 19 212 304 109 22 chr17 10303287 10303425 -75135055 + MIR3 SINE MIR 13 162 -46 183 80 0 0 chr17 10303643 10303668 -75134812 + (CAA)n Simple_repeat Simple_repeat 2 26 0 502 255 26 63 chr17 10304637 10304863 -75133617 - MIR SINE MIR -20 242 26 717 144 4 43 chr17 10305166 10305441 -75133039 + (ATGGTG)n Simple_repeat Simple_repeat 1 264 0 770 168 6 0 chr17 10305459 10305557 -75132923 + (ATG)n Simple_repeat Simple_repeat 3 164 0 408 111 0 0 chr17 10305557 10305620 -75132860 + (ATG)n Simple_repeat Simple_repeat 3 65 0 188 188 0 0 chr17 10305815 10305847 -75132633 + MIR SINE MIR 207 238 -24 746 195 43 16 chr17 10305880 10306065 -75132415 - L1MB8 LINE L1 -1 6177 5988 459 298 21 21 chr17 10306083 10306224 -75132256 - MIR SINE MIR -108 154 14 310 295 27 55 chr17 10306233 10306348 -75132132 - MIR SINE MIR -67 141 30 252 299 165 16 chr17 10306792 10306919 -75131561 + MIR3 SINE MIR 4 149 -59 186 133 0 0 chr17 10306997 10307027 -75131453 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 1804 191 23 29 chr17 10307038 10307544 -75130936 - L1MA9 LINE L1 -12 6172 5667 233 143 0 20 chr17 10307549 10307598 -75130882 + (TA)n Simple_repeat Simple_repeat 1 48 0 1699 121 60 93 chr17 10307598 10307730 -75130750 - L1M3 LINE L1 -541 5793 5658 2975 13 0 0 chr17 10307730 10308048 -75130432 + AluYb8 SINE Alu 1 318 0 1699 121 60 93 chr17 10308048 10308279 -75130201 - L1M3 LINE L1 -676 5658 5442 291 161 0 16 chr17 10310101 10310163 -75128317 - MER103 DNA DNA -87 79 19 215 330 21 0 chr17 10310334 10310431 -75128049 + (GGGTG)n Simple_repeat Simple_repeat 2 100 0 5261 64 18 0 chr17 10311210 10311886 -75126594 + L1PA7 LINE L1 5463 6150 -4 211 279 158 63 chr17 10312252 10312410 -75126070 + MIR SINE MIR 87 259 -3 224 222 37 0 chr17 10313178 10313232 -75125248 + CT-rich Low_complexity Low_complexity 3 58 0 441 0 0 0 chr17 10313833 10313882 -75124598 + (TG)n Simple_repeat Simple_repeat 2 50 0 229 301 68 8 chr17 10314356 10314489 -75123991 - MER117 DNA MER1_type -56 141 1 390 298 68 58 chr17 10315101 10315655 -75122825 + L1ME4a LINE L1 5287 5849 -272 2235 93 7 17 chr17 10315655 10315956 -75122524 + AluSx SINE Alu 1 298 -14 390 298 68 58 chr17 10315956 10316006 -75122474 + L1ME4a LINE L1 5849 5897 -224 24 32 0 0 chr17 10316024 10316055 -75122425 + AT_rich Low_complexity Low_complexity 1 31 0 538 162 152 0 chr17 10316056 10316161 -75122319 - FLAM_C SINE Alu -2 141 21 23 0 0 0 chr17 10316161 10316184 -75122296 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr17 10316286 10316317 -75122163 + AT_rich Low_complexity Low_complexity 1 31 0 832 187 19 0 chr17 10316326 10316481 -75121999 - FRAM SINE Alu -2 174 17 25 0 0 0 chr17 10317534 10317559 -75120921 + AT_rich Low_complexity Low_complexity 1 25 0 820 124 31 16 chr17 10317559 10317688 -75120792 - FLAM_C SINE Alu 0 133 3 2256 112 3 7 chr17 10317700 10318005 -75120475 - AluSx SINE Alu -8 304 1 255 268 71 62 chr17 10318007 10318119 -75120361 - MIR SINE MIR -98 164 52 413 350 7 0 chr17 10319121 10319258 -75119222 - MIR3 SINE MIR -4 204 67 1497 248 76 11 chr17 10321043 10321515 -75116965 + MER113 DNA MER1_type? 6 508 -13 2272 102 17 0 chr17 10321750 10322043 -75116437 + AluSp SINE Alu 1 298 -15 291 250 140 30 chr17 10322387 10322487 -75115993 - L2 LINE L2 -23 3249 3139 2083 120 7 13 chr17 10322906 10323206 -75115274 - AluSg1 SINE Alu -11 298 1 2431 88 0 0 chr17 10323791 10324085 -75114395 + AluSq SINE Alu 1 294 -19 303 180 49 0 chr17 10325294 10325355 -75113125 + MER69 DNA AcHobo 1 64 -1162 255 143 155 24 chr17 10325486 10325570 -75112910 + MER69 DNA AcHobo 2389 2483 -43 2204 91 0 0 chr17 10325572 10325847 -75112633 + AluSq SINE Alu 1 275 -38 1971 190 52 0 chr17 10325892 10326239 -75112241 + MLT1A1 LTR MaLR 1 365 0 1976 103 0 0 chr17 10326887 10327139 -75111341 + AluSx SINE Alu 49 300 -12 262 203 0 17 chr17 10327163 10327222 -75111258 + L1ME LINE L1 5725 5782 -380 407 299 30 48 chr17 10328903 10329070 -75109410 - MIR SINE MIR -89 173 10 2344 98 0 22 chr17 10329724 10330039 -75108441 + AluSc SINE Alu 2 309 0 183 184 0 82 chr17 10330073 10330122 -75108358 - L2 LINE L2 -190 3082 3038 2630 59 0 0 chr17 10330240 10330545 -75107935 - AluY SINE Alu -6 305 1 473 352 26 11 chr17 10330619 10330883 -75107597 - L1ME LINE L1 -352 5818 5551 2301 82 10 26 chr17 10331101 10331446 -75107034 + AluSx SINE Alu 14 353 0 230 287 0 35 chr17 10331987 10332065 -75106415 + (CA)n Simple_repeat Simple_repeat 1 77 -7 2047 122 3 7 chr17 10332065 10332359 -75106121 - AluSx SINE Alu -19 293 1 230 287 0 35 chr17 10332359 10332367 -75106113 + (CA)n Simple_repeat Simple_repeat 77 84 0 216 0 0 0 chr17 10332369 10332393 -75106087 + (T)n Simple_repeat Simple_repeat 1 24 0 1534 213 7 3 chr17 10332434 10332735 -75105745 - AluJo SINE Alu -10 302 1 23 0 0 0 chr17 10332934 10332957 -75105523 + AT_rich Low_complexity Low_complexity 1 23 0 840 183 0 0 chr17 10332960 10333091 -75105389 - FLAM_C SINE Alu -2 131 1 2413 61 0 0 chr17 10333280 10333587 -75104893 - AluSc SINE Alu 0 307 1 779 301 65 0 chr17 10333667 10333896 -75104584 - MIR SINE MIR -10 252 9 2339 102 0 25 chr17 10334074 10334389 -75104091 - AluSc SINE Alu -2 307 1 1739 153 0 67 chr17 10334434 10334602 -75103878 - AluJb SINE Alu -19 293 154 2898 13 0 0 chr17 10334602 10334913 -75103567 - AluYa5 SINE Alu 0 311 1 1739 153 0 67 chr17 10334913 10335058 -75103422 - AluJb SINE Alu -158 154 1 28 48 0 0 chr17 10335124 10335166 -75103314 + AT_rich Low_complexity Low_complexity 1 42 0 336 374 43 0 chr17 10335978 10336165 -75102315 + L2 LINE L2 1851 2045 -1269 2422 108 0 6 chr17 10336276 10336590 -75101890 - AluSx SINE Alu 0 312 1 2168 99 55 0 chr17 10337313 10337430 -75101050 + AluSx SINE Alu 1 110 -202 184 29 29 29 chr17 10337430 10337464 -75101016 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2168 99 55 0 chr17 10337464 10337638 -75100842 + AluSx SINE Alu 110 308 -4 311 282 162 0 chr17 10337777 10337894 -75100586 + L2 LINE L2 3136 3271 -1 2215 112 3 0 chr17 10338348 10338676 -75099804 + AluSx SINE Alu 1 329 0 337 287 107 56 chr17 10338968 10339184 -75099296 + MIR SINE MIR 31 257 -5 806 193 30 6 chr17 10339185 10339351 -75099129 - FRAM SINE Alu -7 169 1 651 200 33 44 chr17 10340281 10340461 -75098019 + MER20 DNA MER1_type 42 219 0 2206 117 0 3 chr17 10341237 10341537 -75096943 + AluSq SINE Alu 1 299 -14 288 247 116 7 chr17 10341961 10342107 -75096373 + MER3 DNA MER1_type 48 209 0 2217 96 4 0 chr17 10342210 10342527 -75095953 + AluSx SINE Alu 1 318 0 235 325 0 12 chr17 10342527 10342610 -75095870 - MIR3 SINE MIR -7 201 120 560 224 105 28 chr17 10342611 10342703 -75095777 + MIR SINE MIR 51 159 -103 1780 140 101 3 chr17 10342703 10343031 -75095449 + MER46B DNA MER2_type 2 236 0 560 224 105 28 chr17 10343031 10343081 -75095399 + MIR SINE MIR 159 204 -58 2204 123 0 7 chr17 10343083 10343392 -75095088 + AluSx SINE Alu 1 307 -5 278 300 40 0 chr17 10343588 10343688 -75094792 + MER91A DNA MER1_type 93 196 0 198 172 259 0 chr17 10343688 10343746 -75094734 - MIR SINE MIR -77 131 59 2143 212 21 60 chr17 10344041 10344534 -75093946 + MER74A LTR ERVL 2 470 -88 2134 108 24 0 chr17 10344534 10344821 -75093659 - AluSx SINE Alu -16 296 3 2143 212 21 60 chr17 10344821 10344907 -75093573 + MER74A LTR ERVL 470 558 0 198 327 129 10 chr17 10345140 10345241 -75093239 + MIR3 SINE MIR 60 172 -36 2379 92 0 0 chr17 10345385 10345679 -75092801 + AluSc SINE Alu 1 294 -15 180 0 0 0 chr17 10346087 10346107 -75092373 + (TAA)n Simple_repeat Simple_repeat 3 22 0 468 269 0 0 chr17 10346107 10346211 -75092269 - MIR SINE MIR -2 260 157 2687 48 0 3 chr17 10346302 10346613 -75091867 - AluY SINE Alu -1 310 1 273 351 13 0 chr17 10346613 10346690 -75091790 - MIR SINE MIR -114 148 71 307 276 61 10 chr17 10347002 10347100 -75091380 + MIR SINE MIR 110 212 -50 669 142 39 113 chr17 10347285 10347458 -75091022 - MER53 DNA DNA 0 189 32 805 159 0 0 chr17 10347458 10347603 -75090877 - L1MA4 LINE L1 -6 6294 6150 669 142 39 113 chr17 10347603 10347633 -75090847 - MER53 DNA DNA -157 32 1 1964 129 57 0 chr17 10348133 10348413 -75090067 - AluSg SINE Alu -14 296 1 2180 128 0 28 chr17 10348643 10348963 -75089517 - AluSx SINE Alu 0 312 2 31 26 0 0 chr17 10349523 10349561 -75088919 + AT_rich Low_complexity Low_complexity 1 38 0 1459 202 69 0 chr17 10349662 10349824 -75088656 - AluJb SINE Alu -16 296 106 255 61 0 0 chr17 10349824 10349857 -75088623 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1459 202 69 0 chr17 10349857 10349971 -75088509 - AluJb SINE Alu -206 106 1 2350 179 70 56 chr17 10349974 10350421 -75088059 + L1MB7 LINE L1 5557 5996 -188 2372 96 0 3 chr17 10350421 10350724 -75087756 + AluSc SINE Alu 1 302 -7 2350 179 70 56 chr17 10350724 10350817 -75087663 + L1MB7 LINE L1 5996 6109 -75 2031 139 7 7 chr17 10350817 10351112 -75087368 - AluSx SINE Alu -17 295 1 2350 179 70 56 chr17 10351112 10351180 -75087300 + L1MB7 LINE L1 6109 6175 -9 295 259 148 9 chr17 10351829 10351937 -75086543 + L2 LINE L2 3191 3313 0 230 234 258 8 chr17 10352010 10352138 -75086342 - MARNA DNA Mariner -17 569 410 2304 101 0 16 chr17 10352148 10352455 -75086025 + AluSg SINE Alu 1 302 -8 2589 78 0 0 chr17 10353325 10353634 -75084846 + AluSc SINE Alu 1 309 0 2175 118 17 0 chr17 10354700 10354988 -75083492 + AluSq SINE Alu 1 293 -20 2273 93 23 0 chr17 10355322 10355623 -75082857 - AluY SINE Alu -3 308 1 394 269 200 14 chr17 10355940 10356085 -75082395 + MIR SINE MIR 11 182 -80 571 86 0 21 chr17 10356598 10356691 -75081789 + (TTCCC)n Simple_repeat Simple_repeat 3 93 0 1958 148 23 7 chr17 10356707 10357012 -75081468 - AluSx SINE Alu -2 310 1 492 177 20 11 chr17 10357172 10357340 -75081140 + MLT1E1 LTR MaLR 1 231 -423 2213 116 0 3 chr17 10358552 10358853 -75079627 + AluSg SINE Alu 1 300 -10 196 284 90 0 chr17 10359045 10359112 -75079368 - MIR3 SINE MIR -10 198 126 300 230 0 4 chr17 10359802 10359906 -75078574 + MLT1E1 LTR MaLR 79 229 -425 2337 91 7 7 chr17 10359922 10360231 -75078249 + AluSg SINE Alu 1 309 -1 438 232 14 61 chr17 10360438 10360590 -75077890 + MER57A LTR ERV1 42 190 -244 886 173 81 132 chr17 10360619 10360914 -75077566 + MER57A LTR ERV1 124 403 0 2150 126 0 25 chr17 10361195 10361513 -75076967 + AluSx SINE Alu 1 310 -2 446 88 15 0 chr17 10361513 10361581 -75076899 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 473 238 116 11 chr17 10361585 10361766 -75076714 + MIR SINE MIR 63 262 0 351 0 0 0 chr17 10363441 10363480 -75075000 + (T)n Simple_repeat Simple_repeat 1 39 0 2232 108 0 3 chr17 10364575 10364872 -75073608 - AluSx SINE Alu -14 298 3 821 232 11 21 chr17 10366026 10366091 -75072389 + MER5A DNA MER1_type 2 66 -123 1607 174 30 27 chr17 10366091 10366390 -75072090 + AluJo SINE Alu 2 301 -11 821 232 11 21 chr17 10366390 10366514 -75071966 + MER5A DNA MER1_type 66 189 0 197 268 28 14 chr17 10366531 10366602 -75071878 - MIR SINE MIR -91 117 46 3525 228 36 19 chr17 10366635 10367433 -75071047 + MER21B LTR ERV1 1 812 -51 783 255 109 40 chr17 10368061 10368259 -75070221 - MER113 DNA MER1_type? -169 352 120 2506 168 19 28 chr17 10368259 10368724 -75069756 + MLT1C LTR MaLR 5 465 -2 783 255 109 40 chr17 10368724 10368854 -75069626 - MER113 DNA MER1_type? -401 120 1 2311 96 0 7 chr17 10368905 10369206 -75069274 - AluSq SINE Alu -14 299 1 1189 36 0 0 chr17 10370812 10370949 -75067531 + AluY SINE Alu 166 302 -9 2048 94 11 7 chr17 10372484 10372779 -75065701 - AluSq SINE Alu 0 304 9 1001 158 33 0 chr17 10372997 10373180 -75065300 - MER5A DNA MER1_type 0 189 1 275 276 217 7 chr17 10373195 10373347 -75065133 + MER5A DNA MER1_type 6 189 0 456 62 0 0 chr17 10373453 10373517 -75064963 + (TG)n Simple_repeat Simple_repeat 2 65 0 239 309 21 0 chr17 10373796 10373890 -75064590 + CT-rich Low_complexity Low_complexity 4 99 0 201 133 0 0 chr17 10373932 10373962 -75064518 + (CA)n Simple_repeat Simple_repeat 1 30 0 2318 110 0 0 chr17 10373994 10374293 -75064187 - AluSx SINE Alu -13 299 1 5809 184 116 17 chr17 10374764 10374959 -75063521 - Charlie1a DNA MER1_type -1306 1455 1281 2270 116 0 0 chr17 10374959 10375261 -75063219 - AluSx SINE Alu -10 302 1 5809 184 116 17 chr17 10375261 10376388 -75062092 - Charlie1a DNA MER1_type -1480 1281 1 257 156 219 94 chr17 10376730 10376890 -75061590 - MER104 DNA Tc2 0 180 1 252 268 0 14 chr17 10376992 10377063 -75061417 - MER5A DNA MER1_type -88 101 32 247 233 53 47 chr17 10377067 10377217 -75061263 - MER113 DNA MER1_type? -370 151 1 789 313 168 6 chr17 10377452 10377982 -75060498 - L3 LINE CR1 -182 1395 780 301 296 23 0 chr17 10379879 10379967 -75058513 + MIR3 SINE MIR 108 197 -11 24 0 0 0 chr17 10381272 10381296 -75057184 + AT_rich Low_complexity Low_complexity 1 24 0 1769 129 0 104 chr17 10381296 10381613 -75056867 - AluSx SINE Alu -18 284 1 753 85 0 0 chr17 10382106 10382212 -75056268 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 2349 87 3 0 chr17 10382217 10382516 -75055964 - AluSp SINE Alu 0 313 14 471 287 0 18 chr17 10382588 10382755 -75055725 - MER103 DNA DNA -1 165 2 227 125 0 104 chr17 10382898 10382946 -75055534 + L2 LINE L2 3230 3272 0 2078 143 0 10 chr17 10383065 10383379 -75055101 + AluSx SINE Alu 1 311 -1 540 299 103 0 chr17 10383416 10383590 -75054890 - MIR SINE MIR -54 208 17 200 248 133 26 chr17 10383617 10383730 -75054750 - L2 LINE L2 -25 3247 3123 22 35 0 0 chr17 10383968 10383997 -75054483 + AT_rich Low_complexity Low_complexity 1 29 0 403 317 21 14 chr17 10384028 10384179 -75054301 - MIR SINE MIR -73 135 7 306 106 0 0 chr17 10384481 10384528 -75053952 + (CA)n Simple_repeat Simple_repeat 2 48 0 2253 117 0 3 chr17 10384957 10385256 -75053224 + AluSx SINE Alu 1 298 -14 2560 60 0 22 chr17 10385395 10385709 -75052771 + AluY SINE Alu 1 307 -4 761 129 129 0 chr17 10386969 10387109 -75051371 - L1MA10 LINE L1 0 6334 6177 344 305 67 0 chr17 10388157 10388262 -75050218 - MIR SINE MIR -67 141 30 619 281 47 10 chr17 10388713 10388905 -75049575 + MIR SINE MIR 6 204 -58 327 284 86 0 chr17 10389254 10389335 -75049145 + MER81 DNA DNA 4 91 -23 612 134 0 0 chr17 10389446 10389543 -75048937 - AluSc SINE Alu 0 309 213 232 263 200 0 chr17 10389708 10389788 -75048692 - L2 LINE L2 0 3313 3218 471 267 159 4 chr17 10389861 10390097 -75048383 - L2 LINE L2 -262 3051 2770 674 51 19 10 chr17 10390366 10390623 -75047857 + AluSp SINE Alu 2 308 -5 2544 59 3 0 chr17 10391095 10391398 -75047082 - AluSq SINE Alu -9 304 1 682 273 65 29 chr17 10392299 10392347 -75046133 - L1ME4a LINE L1 -126 5995 5950 1664 114 0 4 chr17 10392347 10392584 -75045896 - AluSc SINE Alu -1 308 73 2308 95 7 0 chr17 10392585 10392880 -75045600 - AluSc SINE Alu -12 297 1 682 273 65 29 chr17 10392880 10393213 -75045267 - L1ME4a LINE L1 -170 5951 5598 2062 116 36 13 chr17 10393768 10394070 -75044410 + AluSc SINE Alu 1 309 0 770 239 46 35 chr17 10394089 10394191 -75044289 + L1M4 LINE L1 4317 4416 -1730 2423 92 0 0 chr17 10394191 10394494 -75043986 + AluSg SINE Alu 1 303 -7 770 239 46 35 chr17 10394494 10394675 -75043805 + L1M4 LINE L1 4416 4603 -1543 2658 218 83 42 chr17 10394777 10395883 -75042597 - L1ME1 LINE L1 -5 6161 5017 214 288 15 61 chr17 10396194 10396326 -75042154 + L2 LINE L2 2474 2599 -715 1991 132 0 32 chr17 10396353 10396664 -75041816 - AluJb SINE Alu -7 305 5 1286 260 58 31 chr17 10396668 10397146 -75041334 + L2 LINE L2 2589 3090 -223 2557 44 0 0 chr17 10397146 10397440 -75041040 + AluY SINE Alu 1 294 -17 1286 260 58 31 chr17 10397440 10397671 -75040809 + L2 LINE L2 3090 3313 0 2025 138 0 0 chr17 10399010 10399313 -75039167 + AluSx SINE Alu 1 303 0 394 288 121 0 chr17 10399829 10399961 -75038519 - MIR SINE MIR -109 153 6 423 239 52 58 chr17 10401284 10401439 -75037041 + MER20B DNA MER1_type 1 154 -629 261 0 0 0 chr17 10401604 10401633 -75036847 + (T)n Simple_repeat Simple_repeat 1 29 0 222 273 15 15 chr17 10402233 10402299 -75036181 + MIR SINE MIR 40 105 -103 682 301 64 4 chr17 10402308 10402544 -75035936 - MIR SINE MIR -12 250 1 26 30 0 0 chr17 10403277 10403310 -75035170 + AT_rich Low_complexity Low_complexity 1 33 0 260 208 145 38 chr17 10403412 10403571 -75034909 - L1ME4a LINE L1 0 6121 5946 444 271 231 8 chr17 10403627 10403878 -75034602 - L1ME4a LINE L1 -281 5840 5534 2141 86 22 59 chr17 10404682 10405006 -75033474 - AluSx SINE Alu 0 312 1 597 298 28 32 chr17 10405731 10405979 -75032501 + MIR SINE MIR 13 259 -3 381 162 0 0 chr17 10406563 10406631 -75031849 + (TA)n Simple_repeat Simple_repeat 1 68 0 1498 138 17 4 chr17 10406631 10406862 -75031618 - MER46A DNA MER2_type 0 236 3 227 53 0 26 chr17 10406862 10406900 -75031580 + (TG)n Simple_repeat Simple_repeat 2 38 0 2462 47 0 24 chr17 10407534 10407832 -75030648 + AluY SINE Alu 1 291 -20 407 319 76 32 chr17 10409655 10409840 -75028640 + MIR3 SINE MIR 15 207 -1 663 224 72 105 chr17 10410088 10410449 -75028031 - L1MC4 LINE L1 -1 8041 7693 21 0 0 0 chr17 10411101 10411122 -75027358 + AT_rich Low_complexity Low_complexity 1 21 0 252 86 0 0 chr17 10412339 10412374 -75026106 + (CA)n Simple_repeat Simple_repeat 2 36 0 194 300 210 0 chr17 10414914 10415014 -75023466 + MIR3 SINE MIR 65 185 -23 2035 129 0 0 chr17 10415171 10415485 -75022995 + AluSg SINE Alu 1 314 0 2263 105 7 0 chr17 10415556 10415851 -75022629 - AluSg SINE Alu -13 297 1 686 306 53 20 chr17 10416131 10416432 -75022048 + MARNA DNA Mariner 185 495 -91 1934 149 4 0 chr17 10417634 10417941 -75020539 + AluJb SINE Alu 1 308 0 24 32 0 0 chr17 10418027 10418058 -75020422 + AT_rich Low_complexity Low_complexity 1 31 0 2244 97 0 7 chr17 10418707 10419006 -75019474 + AluSc SINE Alu 1 297 -12 243 351 117 7 chr17 10419433 10419587 -75018893 - MIR3 SINE MIR -23 185 15 356 313 108 5 chr17 10419625 10419820 -75018660 + MIR SINE MIR 48 262 0 189 281 247 48 chr17 10420690 10420836 -75017644 + MIR3 SINE MIR 21 195 -13 4302 149 8 4 chr17 10423540 10424272 -75014208 - L1MB3 LINE L1 -2 6181 5447 703 206 37 16 chr17 10424300 10424489 -75013991 - L1MC5 LINE L1 -44 7917 7725 430 326 0 35 chr17 10424489 10424630 -75013850 - MIR3 SINE MIR -6 202 67 299 239 11 43 chr17 10425994 10426086 -75012394 + MIR SINE MIR 59 147 -61 2255 110 0 0 chr17 10426670 10426970 -75011510 - AluSq SINE Alu -13 300 1 22 0 0 0 chr17 10428880 10428902 -75009578 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 10430291 10430322 -75008158 + AT_rich Low_complexity Low_complexity 1 31 0 392 112 21 5 chr17 10430332 10430413 -75008067 - L1ME1 LINE L1 0 6184 6096 340 226 8 25 chr17 10430420 10430542 -75007938 - L1MD2 LINE L1 -26 6140 6040 23 54 0 0 chr17 10430796 10430833 -75007647 + AT_rich Low_complexity Low_complexity 1 37 0 601 191 33 33 chr17 10430913 10431065 -75007415 - L1MC5 LINE L1 -40 7921 7770 409 318 22 19 chr17 10431556 10431871 -75006609 - L1M4 LINE L1 -1490 4656 4341 299 224 13 26 chr17 10431963 10432039 -75006441 + MLT1J LTR MaLR 127 201 -310 330 284 90 15 chr17 10432316 10432517 -75005963 - L1M4 LINE L1 -1823 4323 4108 2683 161 30 34 chr17 10432695 10433229 -75005251 + L1MB7 LINE L1 5630 6161 -23 460 318 75 29 chr17 10433235 10433782 -75004698 - L1M4 LINE L1 -2202 3944 3373 246 251 0 62 chr17 10433850 10434029 -75004451 + T-rich Low_complexity Low_complexity 4 171 0 628 243 68 0 chr17 10434392 10434614 -75003866 - L1ME3A LINE L1 -215 5955 5719 1132 247 15 10 chr17 10434738 10435057 -75003423 - L1ME1 LINE L1 -5 6161 5841 824 214 48 24 chr17 10435186 10435434 -75003046 - L1ME1 LINE L1 -306 5860 5607 357 305 107 10 chr17 10435576 10436065 -75002415 + L1MC/D LINE L1 4724 5324 -846 477 0 0 0 chr17 10436065 10436118 -75002362 + (CA)n Simple_repeat Simple_repeat 2 54 0 357 305 107 10 chr17 10436118 10436375 -75002105 + L1MC/D LINE L1 5324 5555 -615 227 350 0 8 chr17 10437179 10437196 -75001284 - L1P4 LINE L1 -285 5878 5862 2489 231 120 25 chr17 10437196 10438401 -75000079 - L1MC4 LINE L1 -454 5708 4506 1008 232 23 26 chr17 10438403 10438713 -74999767 - L1MC4 LINE L1 -2057 4089 3781 2198 157 12 0 chr17 10438752 10439089 -74999391 + MER7A DNA MER2_type 8 346 0 354 189 81 0 chr17 10439100 10439174 -74999306 - L1M4c LINE L1 -2377 4580 4501 * 3779 210 41 33 chr17 10439165 10440294 -74998186 - L1M4c LINE L1 -2959 3998 2888 676 191 0 28 chr17 10440342 10440483 -74997997 - FLAM_C SINE Alu -2 141 5 388 268 56 82 chr17 10440496 10440727 -74997753 - L1M4c LINE L1 -4315 2823 2599 5391 257 63 39 chr17 10440784 10441129 -74997351 - L1M4c LINE L1 -4463 2675 2340 423 0 0 0 chr17 10441129 10441176 -74997304 + (TG)n Simple_repeat Simple_repeat 2 48 0 5391 257 63 39 chr17 10441176 10442095 -74996385 - L1M4c LINE L1 -4798 2340 1444 1282 167 0 12 chr17 10442095 10442341 -74996139 - L1MA4A LINE L1 -1 6302 6060 5391 257 63 39 chr17 10442341 10443554 -74994926 - L1M4c LINE L1 -5694 1444 1 5400 204 95 56 chr17 10443567 10444912 -74993568 - L1MDa LINE L1 -4149 2391 790 2327 126 25 3 chr17 10444912 10445268 -74993212 + THE1B LTR MaLR 1 364 0 5400 204 95 56 chr17 10445268 10445927 -74992553 - L1MDa LINE L1 -5750 790 158 1881 119 54 110 chr17 10445927 10446429 -74992051 - THE1C LTR MaLR 0 428 1 779 172 28 7 chr17 10446429 10446574 -74991906 - L1MDa LINE L1 -6378 162 15 1175 228 69 27 chr17 10446706 10447040 -74991440 - L2 LINE L2 0 3313 2966 212 324 165 23 chr17 10447182 10447358 -74991122 + MIR SINE MIR 61 261 -1 267 239 28 42 chr17 10447416 10447487 -74990993 - MIR3 SINE MIR -35 173 104 976 166 55 22 chr17 10447566 10447747 -74990733 + MER5A DNA MER1_type 3 189 0 2534 51 0 6 chr17 10448284 10448595 -74989885 - AluY SINE Alu -2 309 1 204 327 37 19 chr17 10450076 10450183 -74988297 + L2 LINE L2 2584 2692 -622 358 292 87 102 chr17 10450349 10450681 -74987799 + L2 LINE L2 2941 3267 -5 2142 117 30 3 chr17 10451253 10451551 -74986929 + AluSq SINE Alu 3 308 -5 283 229 33 16 chr17 10451859 10451920 -74986560 + MER69 DNA AcHobo 4 65 -112 497 191 167 0 chr17 10452059 10452185 -74986295 + MER69 DNA AcHobo 2380 2526 0 2570 62 0 0 chr17 10453359 10453665 -74984815 + AluY SINE Alu 1 306 -5 22 35 0 0 chr17 10453773 10453802 -74984678 + AT_rich Low_complexity Low_complexity 1 29 0 333 255 124 0 chr17 10454010 10454155 -74984325 - L1ME4a LINE L1 -204 5917 5755 273 362 0 9 chr17 10455061 10455177 -74983303 - MIR3 SINE MIR -13 195 81 367 338 60 15 chr17 10457156 10457289 -74981191 - MIR3 SINE MIR 0 208 70 21 0 0 0 chr17 10461183 10461204 -74977276 + AT_rich Low_complexity Low_complexity 1 21 0 288 350 25 17 chr17 10461712 10461832 -74976648 + MIR3 SINE MIR 38 158 -50 420 272 24 8 chr17 10464757 10464882 -74973598 + MIR3 SINE MIR 81 207 -1 2478 137 29 12 chr17 10471627 10472042 -74966438 - L1PA16 LINE L1 -11 6155 5734 2852 7 0 0 chr17 10473377 10473686 -74964794 - AluYa5 SINE Alu -2 309 1 23 0 0 0 chr17 10475166 10475189 -74963291 + AT_rich Low_complexity Low_complexity 1 23 0 419 301 23 29 chr17 10476291 10476464 -74962016 - MIR3 SINE MIR -9 199 28 190 314 47 12 chr17 10476493 10476579 -74961901 - MIR SINE MIR -142 120 32 23 54 0 0 chr17 10479383 10479420 -74959060 + AT_rich Low_complexity Low_complexity 1 37 0 1389 270 92 28 chr17 10479666 10480051 -74958429 - L2 LINE L2 0 3313 2954 2402 128 35 29 chr17 10480051 10480506 -74957974 + L1MA8 LINE L1 5831 6288 -3 1389 270 92 28 chr17 10480506 10480816 -74957664 - L2 LINE L2 -359 2954 2583 570 231 104 6 chr17 10480818 10481000 -74957480 - MLT1G LTR MaLR 0 590 391 1467 294 71 62 chr17 10481034 10481938 -74956542 - L2 LINE L2 -1541 1773 862 1320 254 35 0 chr17 10481940 10482314 -74956166 - L1M4 LINE L1 -2333 3813 3427 211 267 27 27 chr17 10482325 10482400 -74956080 - L2 LINE L2 -2448 866 792 332 296 159 56 chr17 10482665 10482935 -74955545 - L2 LINE L2 -67 3246 2949 591 303 32 23 chr17 10482973 10483191 -74955289 - MIR SINE MIR -18 244 25 405 167 0 0 chr17 10483203 10483281 -74955199 + CT-rich Low_complexity Low_complexity 3 80 0 1896 149 7 3 chr17 10483283 10483571 -74954909 - AluSx SINE Alu -21 291 3 253 184 41 0 chr17 10483589 10483638 -74954842 + L3 LINE CR1 1527 1577 0 263 237 36 65 chr17 10485084 10485223 -74953257 + (ATAGG)n Simple_repeat Simple_repeat 4 138 0 266 265 16 65 chr17 10485428 10485613 -74952867 + (ATAAG)n Simple_repeat Simple_repeat 2 177 0 244 326 54 31 chr17 10486045 10486174 -74952306 - L2 LINE L2 0 3313 3182 2041 299 129 40 chr17 10486306 10487498 -74950982 - L2 LINE L2 -529 2785 1488 23 33 0 0 chr17 10487587 10487617 -74950863 + AT_rich Low_complexity Low_complexity 1 30 0 482 120 100 0 chr17 10487617 10487717 -74950763 - L1MA9 LINE L1 -22 7709 7600 8345 228 36 73 chr17 10487720 10488558 -74949922 - L1MA9 LINE L1 -231 7500 6633 2799 91 8 3 chr17 10488558 10488931 -74949549 - THE1C LTR MaLR 0 375 1 9749 110 31 57 chr17 10488931 10490553 -74947927 - THE1C-int LTR MaLR 0 1580 1 2608 106 19 3 chr17 10490553 10490922 -74947558 - THE1C LTR MaLR 0 375 1 8345 228 36 73 chr17 10490922 10491388 -74947092 - L1MA9 LINE L1 -1096 6635 6153 1550 119 91 163 chr17 10491388 10491849 -74946631 - THE1C LTR MaLR 0 428 1 8345 228 36 73 chr17 10491849 10492188 -74946292 - L1MA9 LINE L1 -1578 6153 5803 2151 136 87 8 chr17 10492188 10492579 -74945901 - MSTA LTR MaLR 0 428 7 5519 131 38 46 chr17 10492579 10493659 -74944821 - MER11C LTR ERVK 0 1071 1 8345 228 36 73 chr17 10493659 10496398 -74942082 - L1MA9 LINE L1 -1926 5805 3033 1232 178 160 53 chr17 10496400 10496826 -74941654 - AluSx SINE Alu 0 456 1 2415 243 42 15 chr17 10496826 10497810 -74940670 - L1M2 LINE L1 -4194 2655 1646 615 330 137 33 chr17 10497812 10498549 -74939931 - L2 LINE L2 -2185 1129 316 23 0 0 0 chr17 10500319 10500342 -74938138 + AT_rich Low_complexity Low_complexity 1 23 0 216 86 0 0 chr17 10500455 10500490 -74937990 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 242 297 168 40 chr17 10500794 10500895 -74937585 - MIR3 SINE MIR -6 202 89 1121 293 165 25 chr17 10501167 10501802 -74936678 + L2 LINE L2 2250 2973 -341 2518 50 0 0 chr17 10503092 10503389 -74935091 + AluY SINE Alu 1 297 -14 21 0 0 0 chr17 10503431 10503452 -74935028 + AT_rich Low_complexity Low_complexity 1 21 0 276 305 76 0 chr17 10504424 10504529 -74933951 + L2 LINE L2 3167 3279 -34 23 33 0 0 chr17 10507374 10507404 -74931076 + AT_rich Low_complexity Low_complexity 1 30 0 191 254 169 51 chr17 10507740 10507858 -74930622 + MIR SINE MIR 90 221 -41 328 235 140 29 chr17 10507971 10508107 -74930373 + L1MC4 LINE L1 6609 6759 -1283 21 36 0 0 chr17 10510311 10510339 -74928141 + AT_rich Low_complexity Low_complexity 1 28 0 2392 110 0 0 chr17 10514095 10514405 -74924075 - AluSx SINE Alu -2 310 1 2149 135 3 0 chr17 10514678 10514975 -74923505 - AluSx SINE Alu -14 298 1 2286 92 30 3 chr17 10515619 10515924 -74922556 - AluSq SINE Alu 0 313 1 362 321 28 0 chr17 10516427 10516536 -74921944 - L2 LINE L2 -2 3311 3200 414 335 71 33 chr17 10516562 10516744 -74921736 + MER5A DNA MER1_type 1 189 0 1821 69 118 0 chr17 10517499 10517761 -74920719 + L1PA13 LINE L1 5852 6144 -19 673 320 74 4 chr17 10517909 10518140 -74920340 - MIR SINE MIR -3 259 13 1288 178 109 0 chr17 10518264 10518567 -74919913 + L1MB7 LINE L1 5849 6184 0 331 221 0 18 chr17 10519224 10519296 -74919184 - MIR SINE MIR -119 89 20 182 355 0 0 chr17 10521917 10521979 -74916501 - L2 LINE L2 -5 3267 3206 239 341 182 18 chr17 10523323 10523493 -74914987 + MIR3 SINE MIR 2 199 -9 264 289 62 39 chr17 10524658 10524786 -74913694 + L2 LINE L2 3137 3267 -5 204 179 0 0 chr17 10525303 10525342 -74913138 + (TG)n Simple_repeat Simple_repeat 2 40 0 210 71 0 0 chr17 10526596 10526624 -74911856 + (T)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 10527001 10527031 -74911449 + AT_rich Low_complexity Low_complexity 1 30 0 370 274 158 20 chr17 10527231 10527377 -74911103 - MIR3 SINE MIR -41 167 2 240 163 0 0 chr17 10529195 10529238 -74909242 + (CATA)n Simple_repeat Simple_repeat 2 44 0 235 326 7 7 chr17 10529641 10529779 -74908701 - L1 LINE L1 -2417 3729 3592 604 315 106 58 chr17 10529852 10530522 -74907958 - L1 LINE L1 -2709 3437 2736 887 260 166 19 chr17 10533602 10533975 -74904505 - L2 LINE L2 -1 3312 2885 349 312 43 0 chr17 10533989 10534130 -74904350 + L2 LINE L2 3161 3307 -6 1407 94 0 16 chr17 10535646 10535838 -74902642 - AluSc SINE Alu -1 308 120 284 337 20 92 chr17 10536039 10536235 -74902245 + MIR SINE MIR 29 210 -52 186 333 0 0 chr17 10537992 10538055 -74900425 - L2 LINE L2 -219 3053 2991 958 215 0 31 chr17 10539681 10539876 -74898604 - MER5A DNA MER1_type 0 189 1 252 260 23 68 chr17 10540128 10540305 -74898175 - MER112 DNA MER1_type -61 199 31 621 238 19 31 chr17 10541960 10542120 -74896360 + MIR SINE MIR 59 216 -46 22 35 0 0 chr17 10542210 10542239 -74896241 + AT_rich Low_complexity Low_complexity 1 29 0 2211 117 0 0 chr17 10542247 10542538 -74895942 + AluSx SINE Alu 1 291 -21 990 40 8 0 chr17 10543810 10543935 -74894545 + L1PB1 LINE L1 6025 6150 -1 2225 59 0 15 chr17 10546003 10546273 -74892207 + AluY SINE Alu 32 297 -14 229 228 193 9 chr17 10546274 10546388 -74892092 + L1ME4a LINE L1 5987 6121 0 6672 113 19 29 chr17 10548397 10549479 -74889001 + MER11C LTR ERVK 1 1071 0 1980 128 3 3 chr17 10549604 10549912 -74888568 + AluSx SINE Alu 1 308 0 631 249 72 37 chr17 10549949 10550350 -74888130 + L1ME4a LINE L1 5691 6105 -16 22 0 0 0 chr17 10550801 10550823 -74887657 + AT_rich Low_complexity Low_complexity 1 22 0 625 103 48 40 chr17 10550966 10551092 -74887388 + L1MA7 LINE L1 6165 6291 0 204 163 0 0 chr17 10552602 10552645 -74885835 + (TG)n Simple_repeat Simple_repeat 2 44 0 1347 158 0 14 chr17 10553188 10553403 -74885077 - AluJb SINE Alu -23 289 78 303 28 0 0 chr17 10553869 10553905 -74884575 + (TA)n Simple_repeat Simple_repeat 2 37 0 407 332 71 42 chr17 10554076 10554314 -74884166 - L2 LINE L2 -5 3267 3023 2057 113 0 36 chr17 10554410 10554712 -74883768 + AluSx SINE Alu 1 291 -21 345 307 20 0 chr17 10555806 10555907 -74882573 + MIR SINE MIR 44 146 -62 2318 91 0 3 chr17 10559228 10559526 -74878954 - AluY SINE Alu -14 297 1 525 212 123 47 chr17 10560312 10560482 -74877998 + MIR SINE MIR 47 229 -33 1533 109 0 0 chr17 10560866 10561067 -74877413 + AluSq SINE Alu 1 201 -112 22 0 0 0 chr17 10561067 10561089 -74877391 + AT_rich Low_complexity Low_complexity 1 22 0 7095 18 1 0 chr17 10561089 10561888 -74876592 - L1PA4 LINE L1 -3 6152 5353 776 93 9 19 chr17 10561888 10561996 -74876484 + AluSc SINE Alu 189 295 -14 230 224 24 12 chr17 10562630 10562715 -74875765 + (TA)n Simple_repeat Simple_repeat 2 87 0 278 293 37 70 chr17 10563856 10564071 -74874409 - L2 LINE L2 -215 3057 2850 863 138 23 8 chr17 10564539 10564669 -74873811 + AluJo SINE Alu 5 136 -176 260 164 87 135 chr17 10566113 10566171 -74872309 - Charlie4 DNA MER1_type -1692 269 217 2019 125 7 10 chr17 10566171 10566459 -74872021 + AluSx SINE Alu 13 299 -13 260 164 87 135 chr17 10566459 10566504 -74871976 - Charlie4 DNA MER1_type -1744 217 171 256 135 39 19 chr17 10566504 10566556 -74871924 + MLT2B1 LTR ERVL 1 53 -467 292 152 0 0 chr17 10566577 10566623 -74871857 + MLT2C1 LTR ERVL 350 395 -2 372 164 15 0 chr17 10566625 10566692 -74871788 - Charlie4 DNA MER1_type -1786 175 108 245 254 60 15 chr17 10566996 10567062 -74871418 + MER5B DNA MER1_type 1 69 -109 775 196 137 12 chr17 10567062 10567230 -74871250 + MER5A DNA MER1_type 1 189 0 347 322 9 9 chr17 10567301 10567416 -74871064 + L2 LINE L2 3198 3312 -1 2062 110 31 0 chr17 10567690 10567982 -74870498 - AluSq SINE Alu -12 301 1 201 297 139 59 chr17 10568366 10568568 -74869912 + L2 LINE L2 3093 3310 -3 2389 87 0 0 chr17 10568627 10568926 -74869554 + AluSg SINE Alu 2 300 -10 221 271 24 59 chr17 10568978 10569063 -74869417 + MIR SINE MIR 31 112 -150 1580 253 56 3 chr17 10569953 10570329 -74868151 + MSTD LTR MaLR 1 396 0 230 109 0 22 chr17 10570387 10570433 -74868047 - LTR66 LTR ERVL -175 435 391 4538 118 69 12 chr17 10570478 10571227 -74867253 - Tigger3(Golem) DNA MER2_type -1 3028 2237 614 128 24 128 chr17 10571222 10571268 -74867212 - Tigger3(Golem) DNA MER2_type -490 112 63 * 2192 96 0 57 chr17 10571268 10571582 -74866898 - AluSg SINE Alu -14 296 1 614 128 24 128 chr17 10571582 10571660 -74866820 - Tigger3(Golem) DNA MER2_type -539 63 1 1949 87 0 0 chr17 10572725 10572966 -74865514 + AluSq SINE Alu 1 241 -72 2458 212 56 18 chr17 10573006 10573611 -74864869 - L1ME1 LINE L1 -285 5881 5225 1092 196 0 6 chr17 10573611 10573790 -74864690 + MER45A DNA AcHobo 1 178 0 2458 212 56 18 chr17 10573790 10574050 -74864430 - L1ME1 LINE L1 -941 5225 4976 391 292 60 11 chr17 10574072 10574339 -74864141 - L1ME1 LINE L1 -1535 4611 4332 312 294 77 41 chr17 10574698 10574868 -74863612 - MLT1L LTR MaLR -2 613 438 2559 185 47 4 chr17 10574876 10575384 -74863096 - L1MD3 LINE L1 0 7995 7466 892 204 75 35 chr17 10575430 10575685 -74862795 - L1MC5 LINE L1 -36 7925 7661 316 318 45 68 chr17 10575703 10575967 -74862513 - MLT1J LTR MaLR -154 357 100 1925 117 7 21 chr17 10576347 10576629 -74861851 + AluSx SINE Alu 1 278 -34 653 215 7 0 chr17 10576833 10576968 -74861512 - MER104 DNA Tc2 -44 136 1 797 266 66 11 chr17 10577024 10577295 -74861185 - L1ME3 LINE L1 0 6164 5879 229 185 25 62 chr17 10577307 10577388 -74861092 + L1MC/D LINE L1 5853 5930 -1878 473 216 123 112 chr17 10577469 10577738 -74860742 + L2 LINE L2 3042 3313 0 2380 231 56 31 chr17 10577803 10578153 -74860327 - L1ME2 LINE L1 -70 6235 5895 2274 97 0 3 chr17 10578153 10578453 -74860027 + AluSx SINE Alu 1 299 -13 2380 231 56 31 chr17 10578453 10578918 -74859562 - L1ME2 LINE L1 -410 5895 5315 597 94 0 0 chr17 10578924 10579009 -74859471 + (TA)n Simple_repeat Simple_repeat 2 86 0 317 276 92 0 chr17 10579215 10579313 -74859167 - MIR SINE MIR -138 124 18 1522 166 92 142 chr17 10579521 10579962 -74858518 + LTR49 LTR ERV1 5 408 -187 2443 40 7 3 chr17 10579962 10580258 -74858222 + AluY SINE Alu 1 297 -14 1522 166 92 142 chr17 10580258 10580438 -74858042 + LTR49 LTR ERV1 408 595 0 727 273 151 61 chr17 10580915 10581175 -74857305 - MLT1K LTR MaLR -108 480 174 954 156 44 0 chr17 10581175 10581355 -74857125 - MER53 DNA DNA 0 189 2 727 273 151 61 chr17 10581355 10581472 -74857008 - MLT1K LTR MaLR -414 174 69 1726 158 103 41 chr17 10582107 10582415 -74856065 - MLT2D LTR ERVL -2 518 82 1861 140 13 13 chr17 10582415 10582715 -74855765 + AluJo SINE Alu 1 300 -12 1726 158 103 41 chr17 10582715 10582803 -74855677 - MLT2D LTR ERVL -438 82 1 1648 198 0 22 chr17 10583111 10583430 -74855050 + AluJo SINE Alu 1 312 0 2482 82 0 0 chr17 10584502 10584808 -74853672 - AluY SINE Alu -5 306 1 202 295 82 0 chr17 10584849 10584910 -74853570 - L3 LINE CR1 -4 1573 1508 582 104 125 0 chr17 10584923 10585019 -74853461 - L1MC2 LINE L1 -187 6157 6050 350 284 10 0 chr17 10585216 10585318 -74853162 + MER46C DNA MER2_type 235 337 -1 860 208 46 83 chr17 10585326 10585566 -74852914 - MER46C DNA MER2_type -106 232 2 446 77 0 0 chr17 10585615 10585680 -74852800 + Alu SINE Alu 246 310 -2 2301 105 20 0 chr17 10585681 10585987 -74852493 + AluSx SINE Alu 1 312 0 2373 81 3 0 chr17 10586125 10586423 -74852057 + AluSp SINE Alu 5 303 -10 274 335 36 24 chr17 10586449 10586616 -74851864 - MLT1K LTR MaLR -17 571 403 376 274 30 15 chr17 10587405 10587540 -74850940 - L1ME3A LINE L1 -5 6165 6029 2482 79 0 3 chr17 10588100 10588405 -74850075 - AluSx SINE Alu -8 304 1 3768 150 8 22 chr17 10589145 10589189 -74849291 - L1MB1 LINE L1 -5 6163 6120 2189 113 0 42 chr17 10589189 10589500 -74848980 - AluSx SINE Alu -14 298 1 3768 150 8 22 chr17 10589500 10590076 -74848404 - L1MB1 LINE L1 -48 6120 5552 422 333 33 22 chr17 10591838 10592114 -74846366 + L1ME LINE L1 5518 5796 -325 208 306 139 0 chr17 10592179 10592251 -74846229 + L2 LINE L2 3203 3284 -29 2080 97 35 3 chr17 10593664 10593953 -74844527 - AluSq SINE Alu -15 298 1 352 120 67 13 chr17 10593984 10594059 -74844421 - L1MC2 LINE L1 -11 6333 6255 1439 155 73 0 chr17 10594073 10594318 -74844162 - AluJo SINE Alu -44 268 6 283 142 0 0 chr17 10594318 10594375 -74844105 - Alu SINE Alu -261 40 2 8236 167 92 66 chr17 10594375 10594811 -74843669 - L1MC3 LINE L1 -109 7676 7253 264 269 21 11 chr17 10594811 10594904 -74843576 - MLT1F1 LTR MaLR -434 133 40 8236 167 92 66 chr17 10594904 10595095 -74843385 - L1MC3 LINE L1 -532 7253 7068 2151 117 7 0 chr17 10595095 10595395 -74843085 - AluSx SINE Alu -10 302 1 8236 167 92 66 chr17 10595395 10596652 -74841828 - L1MC3 LINE L1 -717 7068 5648 2130 86 7 0 chr17 10596796 10597102 -74841378 - AluY SINE Alu 0 308 1 1986 154 0 10 chr17 10597724 10598029 -74840451 + AluJb SINE Alu 1 302 -10 2370 86 3 0 chr17 10598499 10598801 -74839679 - AluY SINE Alu -8 303 1 2255 88 0 3 chr17 10598957 10599264 -74839216 - AluSq SINE Alu 0 306 1 2154 123 3 3 chr17 10599679 10599981 -74838499 + AluSx SINE Alu 1 302 -10 532 178 225 0 chr17 10600209 10600338 -74838142 + MER5A DNA MER1_type 3 160 -29 857 159 144 55 chr17 10601033 10601234 -74837246 - MER20 DNA MER1_type 0 219 1 3365 204 24 32 chr17 10601480 10602137 -74836343 - MER82 DNA MER2_type -1 652 1 2213 107 0 3 chr17 10602901 10603192 -74835288 - AluSg SINE Alu -20 290 1 339 283 133 6 chr17 10603420 10603600 -74834880 - MIR SINE MIR -13 249 47 613 264 29 23 chr17 10603834 10603894 -74834586 - MER5B DNA MER1_type -3 175 117 1848 110 8 0 chr17 10603894 10604164 -74834316 + AluSx SINE Alu 37 308 0 613 264 29 23 chr17 10604164 10604276 -74834204 - MER5B DNA MER1_type -61 117 1 919 239 27 0 chr17 10604322 10604506 -74833974 + MER5A DNA MER1_type 1 189 0 368 212 61 0 chr17 10604512 10604611 -74833869 + L1MC4a LINE L1 5337 5441 -918 2343 89 3 3 chr17 10604611 10604915 -74833565 + AluSx SINE Alu 1 304 -8 1276 110 0 0 chr17 10604915 10605078 -74833402 + AluSg/x SINE Alu 132 294 -16 400 312 59 86 chr17 10605081 10605316 -74833164 + L1MC4a LINE L1 5431 5648 -2160 1784 176 0 3 chr17 10605316 10605606 -74832874 + AluSx SINE Alu 20 308 -4 400 312 59 86 chr17 10605606 10605845 -74832635 + L1MC4a LINE L1 5648 5892 -1916 213 261 112 45 chr17 10607205 10607339 -74831141 + L2 LINE L2 2804 2946 -326 745 274 163 26 chr17 10607565 10607915 -74830565 - L2 LINE L2 -10 3303 2906 2255 122 0 0 chr17 10608914 10609217 -74829263 + AluSq SINE Alu 1 303 -10 269 315 86 50 chr17 10610809 10611088 -74827392 - L2 LINE L2 -159 3113 2825 391 328 25 66 chr17 10611239 10611483 -74826997 + MIR SINE MIR 20 253 -9 699 130 0 0 chr17 10612034 10612134 -74826346 + FLAM_C SINE Alu 26 125 -18 1338 142 49 4 chr17 10612156 10612382 -74826098 - L1MC1 LINE L1 -2 6331 6096 233 234 13 26 chr17 10613080 10613157 -74825323 + GA-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 10613578 10613609 -74824871 + AT_rich Low_complexity Low_complexity 1 31 0 1748 183 0 10 chr17 10613614 10613904 -74824576 + AluJo SINE Alu 1 287 -25 201 33 83 33 chr17 10613906 10613966 -74824514 + (TTAA)n Simple_repeat Simple_repeat 1 63 0 30 69 0 0 chr17 10614279 10614337 -74824143 + AT_rich Low_complexity Low_complexity 1 58 0 961 172 0 0 chr17 10614337 10614482 -74823998 - FRAM SINE Alu -31 145 1 256 268 52 10 chr17 10614696 10614793 -74823687 - L1MC4 LINE L1 -15 8027 7927 570 141 9 9 chr17 10614983 10615209 -74823271 + (TA)n Simple_repeat Simple_repeat 1 226 0 538 269 27 36 chr17 10615221 10615487 -74822993 - L1ME3 LINE L1 -303 5818 5599 2315 113 0 0 chr17 10616494 10616796 -74821684 + AluSx SINE Alu 1 302 -10 298 272 8 80 chr17 10616949 10617016 -74821464 + MIR3 SINE MIR 93 148 -60 344 261 5 116 chr17 10617016 10617150 -74821330 + MER5B DNA MER1_type 1 108 -70 2440 80 3 0 chr17 10617150 10617449 -74821031 - AluSp SINE Alu -13 300 1 344 261 5 116 chr17 10617449 10617513 -74820967 + MER5B DNA MER1_type 108 177 -1 298 272 8 80 chr17 10617513 10617570 -74820910 + MIR3 SINE MIR 148 208 0 444 222 77 26 chr17 10617690 10617807 -74820673 + L2 LINE L2 3148 3270 -2 2320 72 24 0 chr17 10618049 10618339 -74820141 - AluSx SINE Alu -15 297 1 818 286 241 32 chr17 10619038 10619888 -74818592 - L2 LINE L2 -402 2912 1885 418 273 26 11 chr17 10619897 10620051 -74818429 - MIR SINE MIR -62 146 36 1663 110 0 25 chr17 10620490 10620726 -74817754 - AluSg/x SINE Alu -7 303 74 1504 233 30 15 chr17 10621005 10621400 -74817080 - L1ME2 LINE L1 -13 6151 5751 22 35 0 0 chr17 10621403 10621432 -74817048 + AT_rich Low_complexity Low_complexity 1 29 0 376 250 14 56 chr17 10621522 10621666 -74816814 + MIR SINE MIR 17 154 -108 225 0 0 0 chr17 10622093 10622118 -74816362 + (TG)n Simple_repeat Simple_repeat 1 25 0 301 198 12 93 chr17 10622258 10622344 -74816136 + L2 LINE L2 3191 3269 -44 746 137 4 40 chr17 10622367 10622652 -74815828 + (GGGA)n Simple_repeat Simple_repeat 1 274 0 853 93 0 31 chr17 10622902 10623063 -74815417 + (GGGA)n Simple_repeat Simple_repeat 4 159 0 218 304 152 17 chr17 10623081 10623145 -74815335 - L2 LINE L2 -601 2713 2659 1210 184 108 54 chr17 10623145 10623514 -74814966 - MLT1B LTR MaLR -1 389 1 218 304 152 17 chr17 10623514 10623686 -74814794 - L2 LINE L2 -655 2659 2445 827 251 150 39 chr17 10623715 10624102 -74814378 + MLT1C LTR MaLR 36 465 -2 249 114 0 0 chr17 10624462 10624497 -74813983 + U2 snRNA snRNA 1 35 -153 495 277 14 20 chr17 10625083 10625231 -74813249 + MIR SINE MIR 90 236 -26 2422 92 0 7 chr17 10625469 10625775 -74812705 + AluSp SINE Alu 1 304 -9 1853 146 10 17 chr17 10626097 10626392 -74812088 - AluJo SINE Alu -19 293 1 266 311 101 14 chr17 10626492 10626701 -74811779 + L2 LINE L2 2554 2780 -534 2365 101 3 0 chr17 10626702 10626999 -74811481 - AluSx SINE Alu -14 298 1 328 358 17 0 chr17 10627334 10627454 -74811026 + L2 LINE L2 3151 3272 0 514 325 64 65 chr17 10629075 10629657 -74808823 - MLT1K LTR MaLR -6 582 2 2334 101 0 10 chr17 10629678 10629986 -74808494 + AluSg SINE Alu 1 305 -5 2309 141 34 18 chr17 10630095 10630479 -74808001 - MLT1B LTR MaLR 0 390 1 405 0 0 0 chr17 10631228 10631273 -74807207 + (CA)n Simple_repeat Simple_repeat 2 46 0 2347 60 13 13 chr17 10631311 10631613 -74806867 - AluSq SINE Alu -11 302 1 363 198 45 0 chr17 10631613 10631724 -74806756 + CT-rich Low_complexity Low_complexity 2 117 0 195 349 12 12 chr17 10632743 10632826 -74805654 + L2 LINE L2 3186 3268 -4 2231 111 0 13 chr17 10633335 10633651 -74804829 + AluSx SINE Alu 1 312 0 2411 96 3 0 chr17 10633766 10634067 -74804413 - AluSp SINE Alu -11 302 1 768 143 0 32 chr17 10634638 10634764 -74803716 + FLAM_A SINE Alu 1 122 -11 303 258 40 24 chr17 10636137 10636261 -74802219 - MLT1K LTR MaLR -3 585 460 2313 105 0 0 chr17 10637350 10637646 -74800834 - AluSg SINE Alu -14 296 1 1998 80 11 8 chr17 10638701 10638965 -74799515 + AluSc SINE Alu 35 299 -10 225 288 0 0 chr17 10639163 10639236 -74799244 + L1MEc LINE L1 1712 1784 -4612 359 310 7 13 chr17 10639301 10639456 -74799024 + L1MEc LINE L1 1919 2072 -4324 446 259 62 55 chr17 10639476 10639651 -74798829 + L1MEc LINE L1 2156 2335 -4061 2315 100 0 7 chr17 10639651 10639960 -74798520 + AluSx SINE Alu 1 307 -5 446 259 62 55 chr17 10639960 10640093 -74798387 + L1MEc LINE L1 2335 2466 -3930 21 57 0 0 chr17 10640130 10640165 -74798315 + AT_rich Low_complexity Low_complexity 1 35 0 427 186 29 20 chr17 10640166 10640268 -74798212 - L1MC5 LINE L1 -51 7910 7808 2413 94 13 0 chr17 10640311 10640619 -74797861 - AluSx SINE Alu 0 312 1 815 125 0 161 chr17 10640621 10640845 -74797635 - L1MC5 LINE L1 -1018 6943 6756 250 250 0 16 chr17 10640865 10640929 -74797551 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 2031 256 117 44 chr17 10641281 10642381 -74796099 - L1MC4a LINE L1 -749 5397 4985 2094 78 37 0 chr17 10642381 10642688 -74795792 + AluSg SINE Alu 1 317 0 2031 256 117 44 chr17 10642688 10642781 -74795699 - L1MC4a LINE L1 -1161 4985 4900 4972 250 68 28 chr17 10642788 10643824 -74794656 + L1MEc LINE L1 2448 3441 -2774 2250 87 10 17 chr17 10643824 10644124 -74794356 + AluSq SINE Alu 1 298 -15 4972 250 68 28 chr17 10644124 10645112 -74793368 + L1MEc LINE L1 3441 4585 -1630 447 287 72 38 chr17 10645124 10645361 -74793119 + L1MEc LINE L1 4852 5096 -1119 25 83 0 0 chr17 10645952 10646012 -74792468 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr17 10646323 10646345 -74792135 + AT_rich Low_complexity Low_complexity 1 22 0 1967 148 7 14 chr17 10647013 10647310 -74791170 - AluJb SINE Alu -17 295 1 1483 142 99 0 chr17 10647584 10647886 -74790594 + Charlie5 DNA MER1_type 2235 2566 -46 30 45 0 0 chr17 10648614 10648658 -74789822 + AT_rich Low_complexity Low_complexity 1 44 0 2362 104 0 0 chr17 10648659 10648957 -74789523 - AluSx SINE Alu -14 298 1 186 305 66 60 chr17 10649012 10649179 -74789301 + L2 LINE L2 2705 2872 -442 1869 213 57 32 chr17 10649467 10649959 -74788521 + MLT1D LTR MaLR 1 504 -1 2321 109 0 0 chr17 10651544 10651838 -74786642 + AluSx SINE Alu 1 294 -18 1484 224 56 44 chr17 10652324 10652805 -74785675 + L2 LINE L2 1962 2448 -866 411 275 56 7 chr17 10653059 10653201 -74785279 + MIR3 SINE MIR 36 184 -24 2499 70 7 0 chr17 10653495 10653797 -74784683 - AluSq SINE Alu -9 304 1 1401 118 5 25 chr17 10654539 10654773 -74783707 - AluSg/x SINE Alu 0 315 86 717 158 53 18 chr17 10654933 10655104 -74783376 + L1MD1 LINE L1 6066 6242 0 537 286 54 75 chr17 10655810 10656251 -74782229 + L2 LINE L2 2878 3309 -4 189 0 0 0 chr17 10657438 10657459 -74781021 + (T)n Simple_repeat Simple_repeat 1 21 0 822 154 23 0 chr17 10657753 10657883 -74780597 - FLAM_A SINE Alu 0 133 1 287 163 0 0 chr17 10658976 10659025 -74779455 + MER103 DNA DNA 74 122 -44 777 257 62 55 chr17 10659056 10659313 -74779167 + MLT1K LTR MaLR 2 260 -328 415 299 53 24 chr17 10659373 10659580 -74778900 + MLT1K LTR MaLR 376 588 0 1261 117 66 5 chr17 10659756 10659953 -74778527 - MER46A DNA MER2_type -1 235 27 2592 45 3 0 chr17 10660317 10660609 -74777871 + AluY SINE Alu 1 293 -18 23 0 0 0 chr17 10660974 10660997 -74777483 + AT_rich Low_complexity Low_complexity 1 23 0 1609 144 0 47 chr17 10661160 10661438 -74777042 - AluJb SINE Alu -8 304 40 484 97 0 14 chr17 10661488 10661560 -74776920 - AluJb SINE Alu -202 110 40 2131 103 0 37 chr17 10662114 10662435 -74776045 + AluSc SINE Alu 1 309 0 906 214 0 0 chr17 10662650 10662823 -74775657 - FRAM SINE Alu -3 173 1 28 0 0 0 chr17 10662848 10662876 -74775604 + AT_rich Low_complexity Low_complexity 1 28 0 2274 72 3 0 chr17 10665491 10665783 -74772697 - AluSq SINE Alu -20 293 1 237 33 0 0 chr17 10665848 10665878 -74772602 + (T)n Simple_repeat Simple_repeat 1 30 0 1264 174 41 0 chr17 10666282 10666524 -74771956 - L1MD3 LINE L1 -10 7985 7734 23 33 0 0 chr17 10667267 10667297 -74771183 + AT_rich Low_complexity Low_complexity 1 30 0 2408 223 224 64 chr17 10667305 10667491 -74770989 - L1MC4 LINE L1 -144 7898 7743 364 136 0 0 chr17 10667491 10667550 -74770930 - AluSp/q SINE Alu -2 301 243 2408 223 224 64 chr17 10667550 10668544 -74769936 - L1MC4 LINE L1 -299 7743 6461 2058 120 17 3 chr17 10670530 10670822 -74767658 + AluSx SINE Alu 1 296 -16 341 67 0 0 chr17 10670848 10670893 -74767587 - L1MA6 LINE L1 -7 6293 6249 4167 155 35 7 chr17 10670893 10672252 -74766228 - L1MA5 LINE L1 -284 6016 4623 490 242 94 1 chr17 10672612 10672791 -74765689 - L1MA10 LINE L1 -4 6330 5978 2861 10 0 0 chr17 10672806 10673111 -74765369 - AluYa5 SINE Alu -6 305 1 2214 197 56 5 chr17 10673155 10673897 -74764583 - L1ME LINE L1 -332 5834 5023 2198 99 31 7 chr17 10675345 10675639 -74762841 - AluSx SINE Alu -11 301 1 2039 119 0 44 chr17 10675681 10676000 -74762480 - AluSx SINE Alu -7 305 1 26 30 0 0 chr17 10678194 10678227 -74760253 + AT_rich Low_complexity Low_complexity 1 33 0 518 283 57 76 chr17 10678252 10678567 -74759913 + L1ME3 LINE L1 5351 5659 -2149 227 329 80 15 chr17 10681706 10681843 -74756637 - MER5A DNA MER1_type -37 152 7 1387 185 32 50 chr17 10681866 10682147 -74756333 + AluJo SINE Alu 2 277 -35 25 31 0 0 chr17 10682173 10682205 -74756275 + AT_rich Low_complexity Low_complexity 1 32 0 1715 155 72 35 chr17 10682528 10682698 -74755782 + MLT1B LTR MaLR 2 164 -226 2226 99 0 7 chr17 10682698 10682990 -74755490 + AluSx SINE Alu 1 290 -22 1715 155 72 35 chr17 10682990 10683194 -74755286 + MLT1B LTR MaLR 164 390 0 2518 73 7 0 chr17 10683808 10684111 -74754369 - AluSp SINE Alu -8 305 1 2215 102 3 13 chr17 10684608 10684921 -74753559 - AluSp SINE Alu -3 310 1 2277 99 26 0 chr17 10685555 10685859 -74752621 + AluSp SINE Alu 1 312 -1 745 221 55 51 chr17 10686260 10686477 -74752003 + L1ME3 LINE L1 5935 6152 -10 357 256 153 22 chr17 10687395 10687486 -74750994 + MER5A DNA MER1_type 14 131 -58 2206 84 0 40 chr17 10687486 10687814 -74750666 - AluSq SINE Alu 0 316 1 357 256 153 22 chr17 10687814 10687858 -74750622 + MER5A DNA MER1_type 131 168 -21 1992 94 0 0 chr17 10688698 10688953 -74749527 + AluSc SINE Alu 55 309 0 627 186 93 21 chr17 10689316 10689456 -74749024 + L1ME1 LINE L1 6012 6161 -5 2516 48 0 3 chr17 10690081 10690373 -74748107 + AluY SINE Alu 15 305 -6 394 255 147 105 chr17 10690507 10690753 -74747727 + L1ME4a LINE L1 5500 5767 -354 2281 92 3 13 chr17 10690753 10691058 -74747422 + AluSx SINE Alu 1 302 -10 394 255 147 105 chr17 10691058 10691164 -74747316 + L1ME4a LINE L1 5767 5867 -254 629 203 0 23 chr17 10691341 10691474 -74747006 + FLAM_A SINE Alu 4 133 0 265 150 0 208 chr17 10691970 10692006 -74746474 - MIR3 SINE MIR -1 207 165 1967 160 0 22 chr17 10692006 10692324 -74746156 - AluJo SINE Alu -1 311 1 265 150 0 208 chr17 10692324 10692361 -74746119 - MIR3 SINE MIR -43 165 165 2282 89 0 45 chr17 10692361 10692675 -74745805 - AluSx SINE Alu -12 300 1 265 150 0 208 chr17 10692675 10692720 -74745760 - MIR3 SINE MIR -42 166 113 204 292 33 50 chr17 10692839 10692959 -74745521 + MIR SINE MIR 79 196 -66 394 233 104 25 chr17 10693000 10693163 -74745317 + L1M LINE L1 5254 5429 -2379 277 241 21 50 chr17 10693231 10693372 -74745108 - L1MC5 LINE L1 -220 7741 7605 222 91 0 0 chr17 10693523 10693556 -74744924 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 2064 120 0 0 chr17 10693557 10693833 -74744647 - AluSx SINE Alu -36 276 1 423 220 114 59 chr17 10693835 10694071 -74744409 - L1MC4a LINE L1 -1452 6356 6108 1734 254 114 41 chr17 10694075 10694244 -74744236 - L1MC4a LINE L1 -1759 6049 5894 2137 129 3 3 chr17 10694244 10694546 -74743934 - AluSx SINE Alu -10 302 1 1734 254 114 41 chr17 10694546 10695112 -74743368 - L1MC4a LINE L1 -1914 5894 5260 1520 155 30 69 chr17 10695171 10695475 -74743005 - AluJo SINE Alu -9 303 12 942 202 35 0 chr17 10695475 10695648 -74742832 - AluJo SINE Alu -133 179 1 696 277 141 29 chr17 10695683 10696384 -74742096 - L1MC4a LINE L1 -979 5167 4390 192 250 21 0 chr17 10696418 10696466 -74742014 - MER5B DNA MER1_type -129 49 1 2372 110 0 0 chr17 10696505 10696815 -74741665 + AluSx SINE Alu 3 312 0 392 314 17 11 chr17 10697524 10697699 -74740781 + MIR SINE MIR 24 199 -63 2437 102 0 0 chr17 10697860 10698165 -74740315 - AluSx SINE Alu -7 305 1 2082 128 0 0 chr17 10698806 10699141 -74739339 - AluSx SINE Alu 0 335 1 356 292 99 69 chr17 10699183 10699618 -74738862 + L1MC4 LINE L1 7595 8042 0 2026 157 0 0 chr17 10699624 10699936 -74738544 + AluSx SINE Alu 1 312 0 261 0 0 0 chr17 10700627 10700656 -74737824 + (T)n Simple_repeat Simple_repeat 1 29 0 2285 116 0 0 chr17 10700669 10700963 -74737517 + AluSp SINE Alu 1 294 -19 2111 114 0 14 chr17 10700966 10701247 -74737233 - AluSx SINE Alu -35 277 1 2386 74 0 7 chr17 10701255 10701552 -74736928 - AluY SINE Alu -16 295 1 277 348 57 6 chr17 10701767 10701925 -74736555 - MIR SINE MIR -77 185 20 265 254 0 28 chr17 10704027 10704098 -74734382 + GA-rich Low_complexity Low_complexity 5 73 0 27 0 0 0 chr17 10704106 10704133 -74734347 + AT_rich Low_complexity Low_complexity 1 27 0 2210 113 0 35 chr17 10705384 10705702 -74732778 - AluSq SINE Alu -6 307 1 2216 108 7 0 chr17 10705996 10706284 -74732196 + AluSg SINE Alu 1 290 -20 564 141 25 8 chr17 10707689 10707810 -74730670 + GA-rich Low_complexity Low_complexity 2 124 0 643 91 0 30 chr17 10707886 10707985 -74730495 + AluY SINE Alu 198 293 -18 2709 55 0 0 chr17 10709025 10709336 -74729144 + AluY SINE Alu 1 311 0 197 285 152 18 chr17 10709738 10709903 -74728577 + MIR SINE MIR 21 207 -55 2436 78 3 0 chr17 10709905 10710198 -74728282 + AluSc SINE Alu 1 294 -15 2244 105 7 0 chr17 10710743 10711039 -74727441 - AluSg SINE Alu -12 298 1 1412 176 40 0 chr17 10711104 10711376 -74727104 + L1MA7 LINE L1 6009 6291 0 2380 82 0 16 chr17 10711670 10711986 -74726494 + AluY SINE Alu 1 311 0 2343 89 3 0 chr17 10712971 10713262 -74725218 + AluSp SINE Alu 1 292 -21 642 328 52 23 chr17 10713431 10714027 -74724453 - L2 LINE L2 -79 3234 2624 2464 54 0 0 chr17 10714104 10714417 -74724063 + AluSc SINE Alu 2 314 0 1903 164 0 7 chr17 10714870 10715174 -74723306 - AluJb SINE Alu -4 308 7 1454 99 26 0 chr17 10716323 10716515 -74721965 + AluSx SINE Alu 1 197 -115 2049 119 18 7 chr17 10716515 10716793 -74721687 - AluSx SINE Alu -31 281 1 731 130 19 0 chr17 10716793 10716901 -74721579 + AluSx SINE Alu 186 295 -17 2290 113 10 0 chr17 10717766 10718068 -74720412 - AluSx SINE Alu -7 305 1 2456 90 0 0 chr17 10718272 10718572 -74719908 + AluSc SINE Alu 1 300 -9 2343 108 0 0 chr17 10720132 10720437 -74718043 + AluY SINE Alu 1 305 -6 487 343 64 6 chr17 10721065 10721237 -74717243 + MIR3 SINE MIR 17 198 -10 185 279 29 29 chr17 10721218 10721286 -74717194 + L3 LINE CR1 450 517 -1060 * 199 273 0 0 chr17 10722670 10722714 -74715766 - L3 LINE CR1 -4 1573 1530 2497 78 0 0 chr17 10724586 10724882 -74713598 + AluSq SINE Alu 1 296 -17 2351 85 0 7 chr17 10725018 10725312 -74713168 - AluSg SINE Alu -18 292 1 189 0 0 0 chr17 10725636 10725657 -74712823 + (T)n Simple_repeat Simple_repeat 1 21 0 1863 101 8 0 chr17 10725665 10725903 -74712577 - AluSg SINE Alu -70 240 1 278 311 57 19 chr17 10725960 10726066 -74712414 + L2 LINE L2 3162 3271 -1 435 254 56 21 chr17 10727164 10727306 -74711174 + MIR3 SINE MIR 34 180 -28 2128 106 42 0 chr17 10728733 10729016 -74709464 - AluSq SINE Alu -18 295 1 1732 187 11 0 chr17 10729527 10729857 -74708623 + AluJb SINE Alu 1 333 0 2256 95 0 38 chr17 10731063 10731378 -74707102 - AluSq SINE Alu -10 303 1 294 302 206 0 chr17 10732401 10732527 -74705953 - MIR3 SINE MIR -25 183 32 3000 53 11 5 chr17 10732542 10732922 -74705558 + L1PA8 LINE L1 5781 6162 -10 213 333 128 10 chr17 10733783 10733885 -74704595 - L2 LINE L2 -8 3264 3151 783 223 53 57 chr17 10734182 10734366 -74704114 + L1MC5 LINE L1 7414 7598 -363 288 0 0 0 chr17 10734366 10734398 -74704082 + (CA)n Simple_repeat Simple_repeat 2 33 0 783 223 53 57 chr17 10734398 10734531 -74703949 + L1MC5 LINE L1 7598 7730 -231 2485 75 0 0 chr17 10734531 10734826 -74703654 + AluSc SINE Alu 1 295 -14 263 219 229 58 chr17 10735358 10735513 -74702967 - MIR SINE MIR -52 210 42 2208 132 0 6 chr17 10735918 10736229 -74702251 - AluSx SINE Alu -3 309 1 196 230 14 81 chr17 10737446 10737520 -74700960 + MIR SINE MIR 82 150 -58 186 279 81 35 chr17 10737792 10737878 -74700602 - L2 LINE L2 0 3272 3183 2142 117 0 0 chr17 10739660 10739963 -74698517 - AluSg SINE Alu 0 303 1 437 239 25 86 chr17 10740399 10740439 -74698041 - MER5A DNA MER1_type 0 189 148 2289 126 0 0 chr17 10740439 10740741 -74697739 - AluSg SINE Alu -8 302 1 437 239 25 86 chr17 10740741 10740863 -74697617 - MER5A DNA MER1_type -41 148 37 196 345 14 50 chr17 10740883 10741022 -74697458 - MER5A DNA MER1_type -35 154 21 402 295 181 0 chr17 10741046 10741195 -74697285 + MER5A DNA MER1_type 11 186 -3 845 218 16 27 chr17 10741206 10741394 -74697086 - MER5A DNA MER1_type 0 189 4 189 121 0 0 chr17 10741449 10741482 -74696998 + (T)n Simple_repeat Simple_repeat 1 33 0 2265 132 0 0 chr17 10741749 10742060 -74696420 + AluSx SINE Alu 1 311 -1 180 152 0 0 chr17 10742060 10742093 -74696387 + GA-rich Low_complexity Low_complexity 1 33 0 2164 104 37 0 chr17 10742159 10742456 -74696024 + AluSc SINE Alu 1 308 -1 271 0 51 0 chr17 10742489 10742528 -74695952 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2628 59 0 0 chr17 10742538 10742844 -74695636 + AluY SINE Alu 1 306 -5 2568 33 17 0 chr17 10742852 10743151 -74695329 + AluY SINE Alu 1 304 -7 304 28 0 0 chr17 10743605 10743641 -74694839 - AluY SINE Alu -254 47 12 678 169 38 172 chr17 10743781 10743967 -74694513 - MER96B DNA MER1_type? -182 235 94 2507 76 0 6 chr17 10743967 10744281 -74694199 - AluSx SINE Alu 0 312 1 678 169 38 172 chr17 10744281 10744361 -74694119 - MER96B DNA MER1_type? -323 94 5 710 204 34 40 chr17 10745023 10745199 -74693281 + MER5B DNA MER1_type 1 175 -3 1379 130 38 61 chr17 10745316 10745421 -74693059 - AluJb SINE Alu -57 255 149 237 33 0 0 chr17 10745421 10745451 -74693029 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2467 43 13 20 chr17 10745455 10745755 -74692725 - AluY SINE Alu -13 298 1 1379 130 38 61 chr17 10745755 10745905 -74692575 - AluJb SINE Alu -166 146 1 338 307 89 61 chr17 10745950 10746230 -74692250 - L3 LINE CR1 -111 1466 1179 503 69 14 0 chr17 10746468 10746540 -74691940 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 1648 145 7 35 chr17 10746540 10746830 -74691650 - AluJb SINE Alu -30 282 1 328 202 11 35 chr17 10746842 10746944 -74691536 + MIR SINE MIR 91 189 -64 253 167 62 0 chr17 10747640 10747688 -74690792 - L2 LINE L2 -6 3307 3257 1298 166 50 22 chr17 10748867 10749145 -74689335 + L1MB7 LINE L1 5888 6173 -11 432 0 0 0 chr17 10749606 10749654 -74688826 + (CA)n Simple_repeat Simple_repeat 2 49 0 2333 48 4 0 chr17 10749761 10750029 -74688451 - AluY SINE Alu -4 307 39 2340 72 24 0 chr17 10751219 10751510 -74686970 + AluSx SINE Alu 1 298 -14 494 222 77 26 chr17 10751752 10751869 -74686611 - L2 LINE L2 -2 3270 3148 350 272 8 80 chr17 10751989 10752046 -74686434 - MIR3 SINE MIR 0 208 163 371 261 5 116 chr17 10752046 10752110 -74686370 - MER5B DNA MER1_type -1 177 108 2454 80 3 0 chr17 10752110 10752409 -74686071 + AluSp SINE Alu 1 300 -13 371 261 5 116 chr17 10752409 10752543 -74685937 - MER5B DNA MER1_type -70 108 1 350 272 8 80 chr17 10752543 10752610 -74685870 - MIR3 SINE MIR -45 163 93 2107 138 44 0 chr17 10802886 10803183 -74635297 - AluSx SINE Alu -2 310 1 608 303 38 0 chr17 10803212 10803397 -74635083 + MIR SINE MIR 59 250 -12 445 286 67 6 chr17 10803454 10803632 -74634848 - MIR SINE MIR -32 230 42 2112 108 4 4 chr17 10803735 10804014 -74634466 - AluSp SINE Alu -16 297 19 1698 173 94 15 chr17 10804125 10804466 -74634014 + MLT1B LTR MaLR 23 390 0 228 245 78 59 chr17 10805063 10805165 -74633315 + MLT1L LTR MaLR 496 599 -16 1801 101 0 0 chr17 10806889 10807126 -74631354 + AluSg/x SINE Alu 74 310 0 1322 256 39 31 chr17 10807129 10807543 -74630937 - MLT1J2 LTR MaLR -33 417 1 427 306 29 99 chr17 10807559 10807578 -74630902 + MLT1J LTR MaLR 107 126 -385 2374 211 57 16 chr17 10807578 10808122 -74630358 - MLT1F1 LTR MaLR 0 567 2 427 306 29 99 chr17 10808122 10808517 -74629963 + MLT1J LTR MaLR 126 492 -19 214 136 45 23 chr17 10808549 10808593 -74629887 - L2 LINE L2 -23 3249 3205 2379 77 6 13 chr17 10808621 10808934 -74629546 + AluY SINE Alu 1 311 0 668 259 6 0 chr17 10810321 10810483 -74627997 - MER5A DNA MER1_type -14 175 13 930 169 28 5 chr17 10810508 10810521 -74627959 - MER5A DNA MER1_type -2 181 170 2455 155 57 0 chr17 10810521 10810927 -74627553 - MSTB1 LTR MaLR 0 432 4 930 169 28 5 chr17 10810927 10811100 -74627380 - MER5A DNA MER1_type -13 170 9 425 242 71 9 chr17 10811170 10811384 -74627096 + MER115 DNA AcHobo 136 435 -258 472 348 25 16 chr17 10811460 10811704 -74626776 + MIR SINE MIR 8 253 -9 792 250 9 24 chr17 10812299 10812511 -74625969 + MER3 DNA MER1_type 1 209 0 343 342 100 26 chr17 10812891 10813271 -74625209 + L1M4 LINE L1 4487 4894 -1252 872 135 0 8 chr17 10813500 10813633 -74624847 + AluSq/x SINE Alu 1 132 -180 317 142 15 5 chr17 10813735 10813799 -74624681 - Alu SINE Alu -256 46 3 * 2070 144 30 15 chr17 10813799 10814324 -74624156 - L1P4 LINE L1 -696 5470 4938 963 101 20 0 chr17 10814491 10814639 -74623841 - L1PB2 LINE L1 -2 6149 5999 720 109 0 0 chr17 10814641 10814742 -74623738 - L1PB2 LINE L1 -410 5741 5641 1865 222 100 16 chr17 10814842 10815412 -74623068 - MLT2F LTR ERVL -41 611 1 2580 23 0 0 chr17 10815637 10815937 -74622543 + L1P2 LINE L1 5275 5574 -580 226 242 10 61 chr17 10817073 10817172 -74621308 + HAL1b LINE L1 814 907 -441 717 158 53 18 chr17 10817468 10817639 -74620841 - L1MD1 LINE L1 0 6242 6066 1402 118 5 25 chr17 10817799 10818033 -74620447 + AluSg/x SINE Alu 86 315 0 2581 62 7 0 chr17 10818774 10819082 -74619398 + AluSq SINE Alu 1 310 -3 411 275 56 7 chr17 10819377 10819519 -74618961 - MIR3 SINE MIR -24 184 36 1524 227 56 44 chr17 10819773 10820254 -74618226 - L2 LINE L2 -866 2448 1962 22 0 0 0 chr17 10820354 10820376 -74618104 + AT_rich Low_complexity Low_complexity 1 22 0 2298 112 0 0 chr17 10820743 10821037 -74617443 - AluSx SINE Alu -18 294 1 1881 213 57 32 chr17 10822621 10823113 -74615367 - MLT1D LTR MaLR -1 504 1 186 305 66 60 chr17 10823401 10823568 -74614912 - L2 LINE L2 -442 2872 2705 2354 104 0 0 chr17 10823623 10823920 -74614560 + AluSx SINE Alu 1 297 -15 30 45 0 0 chr17 10823921 10823965 -74614515 + AT_rich Low_complexity Low_complexity 1 44 0 1465 146 99 0 chr17 10824694 10824996 -74613484 - Charlie5 DNA MER1_type -46 2566 2235 2030 140 7 13 chr17 10825270 10825570 -74612910 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr17 10826241 10826263 -74612217 + AT_rich Low_complexity Low_complexity 1 22 0 25 83 0 0 chr17 10826574 10826634 -74611846 + AT_rich Low_complexity Low_complexity 1 60 0 465 283 72 38 chr17 10827228 10827465 -74611015 - L1M4 LINE L1 -1119 5027 4783 4961 252 67 26 chr17 10827477 10828465 -74610015 - L1M4 LINE L1 -1630 4516 3569 2264 87 10 17 chr17 10828465 10828765 -74609715 - AluSq SINE Alu -15 298 1 4961 252 67 26 chr17 10828765 10829831 -74608649 - L1M4 LINE L1 -2577 3569 2330 292 276 33 109 chr17 10829814 10829895 -74608585 + L1MC4a LINE L1 4912 4998 -1148 * 2093 78 37 0 chr17 10829895 10830202 -74608278 - AluSg SINE Alu 0 317 1 292 276 33 109 chr17 10830202 10830478 -74608002 + L1MC4a LINE L1 4998 5243 -903 1969 256 136 8 chr17 10830568 10831302 -74607178 + L1MC4a LINE L1 5351 6178 -1630 235 246 0 18 chr17 10831657 10831714 -74606766 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 800 129 0 161 chr17 10831738 10831962 -74606518 + L1MC5 LINE L1 6756 6943 -1018 2434 91 13 0 chr17 10831964 10832272 -74606208 + AluSx SINE Alu 1 312 0 444 176 29 20 chr17 10832310 10832412 -74606068 + L1MC5 LINE L1 7808 7910 -51 22 56 0 0 chr17 10832413 10832449 -74606031 + AT_rich Low_complexity Low_complexity 1 36 0 480 274 52 48 chr17 10832486 10832620 -74605860 - L1MEc LINE L1 -3930 2466 2334 2351 94 0 7 chr17 10832620 10832928 -74605552 - AluSx SINE Alu -6 306 1 480 274 52 48 chr17 10832928 10833103 -74605377 - L1MEc LINE L1 -4062 2334 2156 359 310 7 13 chr17 10833123 10833278 -74605202 - L1MEc LINE L1 -4324 2072 1919 2006 79 11 8 chr17 10833614 10833879 -74604601 - AluSc SINE Alu -9 300 35 2305 105 0 0 chr17 10834931 10835226 -74603254 + AluSg SINE Alu 1 295 -15 303 258 40 24 chr17 10836315 10836439 -74602041 + MLT1K LTR MaLR 460 585 -3 759 151 0 32 chr17 10837812 10837938 -74600542 - FLAM_A SINE Alu -11 122 1 2411 96 3 0 chr17 10838509 10838810 -74599670 + AluSp SINE Alu 1 302 -11 2064 127 3 13 chr17 10838926 10839241 -74599239 - AluSx SINE Alu 0 312 1 205 337 12 12 chr17 10839750 10839833 -74598647 - L2 LINE L2 -4 3268 3186 384 189 45 0 chr17 10840901 10841012 -74597468 + GA-rich Low_complexity Low_complexity 2 117 0 2363 57 13 13 chr17 10841043 10841344 -74597136 + AluSq SINE Alu 1 301 -12 2309 141 34 18 chr17 10842151 10842535 -74595945 + MLT1B LTR MaLR 1 390 0 2334 101 0 10 chr17 10842644 10842952 -74595528 - AluSg SINE Alu -5 305 1 525 325 64 65 chr17 10842973 10843555 -74594925 + MLT1K LTR MaLR 2 582 -6 328 358 17 0 chr17 10845176 10845296 -74593184 - L2 LINE L2 0 3272 3151 2367 101 3 0 chr17 10845631 10845929 -74592551 + AluSx SINE Alu 1 299 -13 266 311 101 14 chr17 10845930 10846139 -74592341 - L2 LINE L2 -534 2780 2554 1853 146 10 17 chr17 10846239 10846534 -74591946 + AluJo SINE Alu 1 293 -19 2438 88 0 7 chr17 10846856 10847162 -74591318 - AluSp SINE Alu -9 304 1 495 277 14 20 chr17 10847400 10847548 -74590932 - MIR SINE MIR -26 236 90 249 114 0 0 chr17 10848134 10848169 -74590311 - U2 snRNA snRNA -153 35 1 827 251 150 39 chr17 10848529 10848916 -74589564 - MLT1C LTR MaLR -2 465 36 218 304 152 17 chr17 10848945 10849117 -74589363 + L2 LINE L2 2445 2659 -655 1210 184 108 54 chr17 10849117 10849486 -74588994 + MLT1B LTR MaLR 1 389 -1 218 304 152 17 chr17 10849486 10849550 -74588930 + L2 LINE L2 2659 2713 -601 189 0 0 0 chr17 10849568 10849589 -74588891 + (TCCC)n Simple_repeat Simple_repeat 3 23 0 381 143 0 51 chr17 10849746 10849844 -74588636 + (TCCC)n Simple_repeat Simple_repeat 1 93 0 301 198 12 93 chr17 10849857 10849943 -74588537 - L2 LINE L2 -44 3269 3191 234 0 0 0 chr17 10850086 10850112 -74588368 + (CA)n Simple_repeat Simple_repeat 2 27 0 395 243 14 56 chr17 10850537 10850681 -74587799 - MIR SINE MIR -108 154 17 22 35 0 0 chr17 10850771 10850800 -74587680 + AT_rich Low_complexity Low_complexity 1 29 0 1504 233 30 15 chr17 10850803 10851198 -74587282 + L1ME2 LINE L1 5751 6151 -13 1663 110 0 25 chr17 10851477 10851713 -74586767 + AluSg/x SINE Alu 74 303 -7 427 265 26 11 chr17 10852151 10852305 -74586175 + MIR SINE MIR 36 189 -62 900 290 217 28 chr17 10852314 10853287 -74585193 + L2 LINE L2 1885 3037 -276 456 119 0 0 chr17 10853291 10853358 -74585122 + THE1C LTR MaLR 309 375 0 442 348 38 24 chr17 10853822 10854109 -74584371 + L2 LINE L2 3023 3313 0 231 36 0 0 chr17 10854454 10854482 -74583998 + (TCCC)n Simple_repeat Simple_repeat 3 30 0 1020 88 24 12 chr17 10854482 10854652 -74583828 + (TTTC)n Simple_repeat Simple_repeat 3 174 0 1146 182 0 0 chr17 10854657 10854838 -74583642 - AluJo SINE Alu -34 278 98 254 140 60 0 chr17 10854914 10854964 -74583516 + Alu SINE Alu 250 302 0 294 29 0 0 chr17 10855371 10855406 -74583074 + (CA)n Simple_repeat Simple_repeat 2 36 0 334 184 0 41 chr17 10855421 10855519 -74582961 + GA-rich Low_complexity Low_complexity 1 94 0 1091 61 0 0 chr17 10856344 10856475 -74582005 + AluSg1 SINE Alu 1 131 -178 1904 142 3 27 chr17 10856479 10856774 -74581706 + AluSx SINE Alu 1 288 -24 201 74 0 0 chr17 10856774 10856801 -74581679 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 396 103 0 0 chr17 10856801 10856859 -74581621 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 365 259 253 17 chr17 10857192 10857366 -74581114 + MIR SINE MIR 8 222 -40 183 389 101 0 chr17 10857835 10857984 -74580496 + L2 LINE L2 3106 3269 -3 386 249 107 53 chr17 10858491 10858660 -74579820 + MLT1K LTR MaLR 404 581 -7 181 347 11 21 chr17 10859848 10859943 -74578537 - L2 LINE L2 -52 3261 3168 1047 283 16 18 chr17 10860859 10861224 -74577256 + LTR16A LTR ERVL 25 449 -1 389 210 50 10 chr17 10861225 10861325 -74577155 + MIR SINE MIR 85 188 -74 331 200 0 106 chr17 10861404 10861489 -74576991 - MER20 DNA MER1_type -143 76 1 1764 160 0 27 chr17 10861512 10861805 -74576675 + AluJb SINE Alu 5 289 -23 216 67 0 0 chr17 10862477 10862507 -74575973 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 2232 86 4 0 chr17 10862641 10862941 -74575539 - AluSx SINE Alu 0 301 1 2454 72 3 10 chr17 10864281 10864587 -74573893 + AluY SINE Alu 1 304 -7 718 182 80 45 chr17 10864816 10864992 -74573488 + MIR SINE MIR 12 192 -67 336 341 0 0 chr17 10865673 10865761 -74572719 + MIR SINE MIR 58 145 -117 456 226 43 86 chr17 10865819 10866005 -74572475 - MER5B DNA MER1_type 0 178 1 613 233 6 6 chr17 10866134 10866314 -74572166 + CT-rich Low_complexity Low_complexity 1 180 0 271 288 0 0 chr17 10866318 10866377 -74572103 + polypyrimidine Low_complexity Low_complexity 2 60 0 663 200 12 6 chr17 10866379 10866549 -74571931 + CT-rich Low_complexity Low_complexity 1 171 0 809 200 51 11 chr17 10866853 10867028 -74571452 - MER5A DNA MER1_type 0 189 8 1220 166 14 9 chr17 10867028 10867245 -74571235 - MER20 DNA MER1_type -1 218 1 1025 216 5 9 chr17 10867308 10867521 -74570959 + MER58A DNA MER1_type 12 223 -1 361 314 142 26 chr17 10867933 10868159 -74570321 - L2 LINE L2 -1 3271 3020 195 69 0 0 chr17 10868900 10868929 -74569551 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 282 247 111 47 chr17 10868999 10869114 -74569366 + MER112 DNA MER1_type 10 116 -144 2018 147 17 0 chr17 10869114 10869413 -74569067 + AluJb SINE Alu 1 304 -8 282 247 111 47 chr17 10869413 10869532 -74568948 + MER112 DNA MER1_type 116 259 -1 325 364 0 0 chr17 10869581 10869757 -74568723 + C-rich Low_complexity Low_complexity 4 179 0 389 347 0 0 chr17 10869779 10869955 -74568525 + C-rich Low_complexity Low_complexity 4 179 0 375 352 0 0 chr17 10869977 10870153 -74568327 + C-rich Low_complexity Low_complexity 4 179 0 2242 108 0 0 chr17 10870536 10870824 -74567656 - AluSg SINE Alu -12 298 11 22 70 0 0 chr17 10870990 10871033 -74567447 + AT_rich Low_complexity Low_complexity 1 43 0 2286 107 7 0 chr17 10871036 10871334 -74567146 - AluSx SINE Alu -12 300 1 1032 167 0 0 chr17 10871336 10871492 -74566988 - FRAM SINE Alu -15 161 6 407 327 54 10 chr17 10871528 10871733 -74566747 + LTR67 LTR ERVL 78 291 -266 237 279 15 52 chr17 10871828 10871964 -74566516 + LTR67 LTR ERVL 427 557 0 1420 277 66 20 chr17 10872627 10873114 -74565366 - LTR33 LTR ERVL -7 514 6 713 209 142 28 chr17 10873128 10873339 -74565141 - MIR SINE MIR -20 242 8 773 232 40 5 chr17 10873341 10873539 -74564941 - MER3 DNA MER1_type -4 205 1 2123 117 24 0 chr17 10873738 10873908 -74564572 - AluSx SINE Alu -8 304 123 324 0 0 0 chr17 10873908 10873944 -74564536 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 2123 117 24 0 chr17 10873944 10874064 -74564416 - AluSx SINE Alu -189 123 7 421 262 150 47 chr17 10874747 10874980 -74563500 - MIR SINE MIR -1 261 5 2438 72 3 0 chr17 10875242 10875533 -74562947 - AluSp SINE Alu -21 292 1 530 296 158 53 chr17 10875582 10875981 -74562499 - L1ME LINE L1 -412 5709 5269 23 0 0 0 chr17 10876173 10876196 -74562284 + AT_rich Low_complexity Low_complexity 1 23 0 731 161 0 8 chr17 10876228 10876346 -74562134 - FLAM_C SINE Alu -25 118 2 2380 106 0 0 chr17 10876417 10876728 -74561752 - AluSx SINE Alu -1 311 1 248 0 31 0 chr17 10876730 10876762 -74561718 + (TA)n Simple_repeat Simple_repeat 2 34 0 922 193 49 67 chr17 10876816 10877039 -74561441 + MER20 DNA MER1_type 1 219 0 361 285 112 65 chr17 10877396 10877610 -74560870 + MIR SINE MIR 20 243 -19 668 208 49 16 chr17 10877777 10877962 -74560518 - MIR SINE MIR -54 208 20 437 282 133 36 chr17 10878739 10878934 -74559546 - MIR SINE MIR -39 223 10 1879 233 122 20 chr17 10879202 10879742 -74558738 + MLT1G1 LTR MaLR 1 595 0 1762 194 0 10 chr17 10879983 10880293 -74558187 - AluJo SINE Alu -1 311 5 386 321 52 36 chr17 10880297 10880546 -74557934 - L3 LINE CR1 -193 1384 1132 935 162 181 0 chr17 10880908 10881118 -74557362 - L1MB5 LINE L1 -90 6084 5837 512 264 277 3 chr17 10881421 10881594 -74556886 + L2 LINE L2 2919 3043 -270 231 36 0 0 chr17 10881594 10881622 -74556858 + (TG)n Simple_repeat Simple_repeat 2 29 0 512 264 277 3 chr17 10881622 10881758 -74556722 + L2 LINE L2 3043 3313 0 237 207 0 0 chr17 10882374 10882456 -74556024 + (TG)n Simple_repeat Simple_repeat 1 82 0 718 265 6 6 chr17 10882626 10882792 -74555688 + MER5B DNA MER1_type 1 166 -12 275 312 10 67 chr17 10882845 10883012 -74555468 + MIR3 SINE MIR 44 196 -51 667 204 74 19 chr17 10883320 10883482 -74554998 + FRAM SINE Alu 1 168 -8 1165 157 25 20 chr17 10884888 10884905 -74553575 - AluJo SINE Alu 0 312 297 2202 115 0 37 chr17 10884905 10885226 -74553254 - AluSc SINE Alu 0 309 1 1165 157 25 20 chr17 10885226 10885405 -74553075 - AluJo SINE Alu -15 297 115 2253 93 0 17 chr17 10885579 10885879 -74552601 + AluSq SINE Alu 1 295 -18 258 324 75 30 chr17 10885910 10886077 -74552403 + L2 LINE L2 2865 3036 -236 466 309 146 20 chr17 10886299 10886600 -74551880 + MLT1H LTR MaLR 210 548 -1 433 245 29 7 chr17 10886628 10886767 -74551713 - LTR37B LTR ERV1 -111 357 216 573 144 0 0 chr17 10887173 10887263 -74551217 + AluS SINE Alu 222 311 -1 2306 95 0 0 chr17 10887471 10887780 -74550700 + AluSq SINE Alu 3 311 0 351 276 40 84 chr17 10887844 10888069 -74550411 + L2 LINE L2 3025 3239 -33 731 217 38 38 chr17 10888192 10888349 -74550131 - MER63A DNA MER1_type -1478 210 51 2204 113 3 7 chr17 10888349 10888642 -74549838 - AluSg SINE Alu -18 292 1 731 217 38 38 chr17 10888642 10888668 -74549812 - MER63A DNA MER1_type -1636 52 27 283 174 0 87 chr17 10888754 10888846 -74549634 + MER58 DNA MER1_type 45 128 -87 248 228 18 0 chr17 10888849 10888906 -74549574 + GA-rich Low_complexity Low_complexity 3 60 0 394 227 0 3 chr17 10888912 10888999 -74549481 + MER58 DNA MER1_type 257 2420 0 2319 86 7 0 chr17 10889049 10889340 -74549140 - AluSx SINE Alu -19 293 1 23 0 0 0 chr17 10889870 10889893 -74548587 + AT_rich Low_complexity Low_complexity 1 23 0 2503 247 76 21 chr17 10889893 10890707 -74547773 - L1ME1 LINE L1 -18 6217 5359 2255 123 7 3 chr17 10890733 10891043 -74547437 - AluSq SINE Alu -2 311 1 380 294 27 41 chr17 10891048 10891269 -74547211 - L1ME1 LINE L1 -2629 3586 3369 1375 185 0 16 chr17 10891270 10891513 -74546967 - AluJb SINE Alu -4 308 70 1849 231 122 15 chr17 10891513 10892149 -74546331 - L1M4 LINE L1 -953 5193 4480 297 75 0 0 chr17 10892149 10892189 -74546291 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1849 231 122 15 chr17 10892189 10892224 -74546256 - L1M4 LINE L1 -1666 4480 4450 252 260 13 0 chr17 10892226 10892303 -74546177 - L1M4 LINE L1 -2625 3521 3444 1246 224 42 70 chr17 10892370 10892994 -74545486 - L1M4 LINE L1 -2693 3453 2848 * 1314 272 48 45 chr17 10892969 10893546 -74544934 - L1ME1 LINE L1 -4346 1914 1388 2336 270 44 30 chr17 10893549 10894264 -74544216 - L1ME1 LINE L1 -5517 879 150 2415 88 3 0 chr17 10894264 10894561 -74543919 - AluSp SINE Alu -15 298 1 2336 270 44 30 chr17 10894561 10894670 -74543810 - L1ME1 LINE L1 -6246 150 44 180 286 71 14 chr17 10894696 10894766 -74543714 + MER5B DNA MER1_type 1 74 -104 * 211 272 163 11 chr17 10894716 10894808 -74543672 - MER5A DNA MER1_type -22 167 62 263 128 0 0 chr17 10895057 10895096 -74543384 + MIR SINE MIR 224 262 0 424 244 94 47 chr17 10895128 10895255 -74543225 - MIR3 SINE MIR -63 145 13 342 0 0 0 chr17 10895309 10895347 -74543133 + (TG)n Simple_repeat Simple_repeat 2 39 0 2464 84 10 0 chr17 10896274 10896584 -74541896 - AluSp SINE Alu 0 313 1 253 263 149 97 chr17 10897146 10897260 -74541220 + MIR SINE MIR 17 136 -72 2268 109 0 0 chr17 10897284 10897613 -74540867 + AluSx SINE Alu 1 329 0 785 144 36 93 chr17 10899197 10899242 -74539238 - MER5A DNA MER1_type 0 189 143 2384 90 0 3 chr17 10899242 10899542 -74538938 - AluSc SINE Alu -10 299 1 785 144 36 93 chr17 10899542 10899690 -74538790 - MER5A DNA MER1_type -46 143 7 448 190 40 30 chr17 10900199 10900299 -74538181 - MER5A DNA MER1_type -5 184 84 537 230 9 18 chr17 10900304 10900417 -74538063 + MER81 DNA DNA 1 112 -2 484 141 0 0 chr17 10900434 10900505 -74537975 - MER5A DNA MER1_type -118 71 1 2073 104 47 0 chr17 10902226 10902505 -74535975 - AluSp SINE Alu -9 304 13 181 260 60 0 chr17 10902617 10902667 -74535813 - MIR SINE MIR -110 98 46 456 291 30 0 chr17 10903105 10903239 -74535241 + MIR3 SINE MIR 15 152 -56 627 195 122 24 chr17 10903253 10903361 -74535119 + MER5A DNA MER1_type 7 138 -51 1838 172 3 3 chr17 10903361 10903652 -74534828 - AluJb SINE Alu -10 302 12 627 195 122 24 chr17 10903652 10903707 -74534773 + MER5A DNA MER1_type 138 186 -3 2101 112 0 0 chr17 10903727 10904004 -74534476 + AluSg SINE Alu 24 300 -10 2359 98 0 0 chr17 10905070 10905365 -74533115 - AluSc SINE Alu -10 299 5 431 303 114 37 chr17 10905774 10906045 -74532435 + L3 LINE CR1 780 1071 -506 377 315 82 35 chr17 10906640 10906872 -74531608 + MIR SINE MIR 14 256 -6 1185 225 9 0 chr17 10907489 10907711 -74530769 - MER58A DNA MER1_type 0 224 1 499 286 0 92 chr17 10907721 10907917 -74530563 + MIR SINE MIR 20 197 -65 453 189 0 0 chr17 10907960 10908055 -74530425 + CT-rich Low_complexity Low_complexity 3 97 0 275 196 26 0 chr17 10909210 10909363 -74529117 + (TG)n Simple_repeat Simple_repeat 1 157 0 220 157 39 0 chr17 10909389 10909440 -74529040 + (TG)n Simple_repeat Simple_repeat 2 54 0 2126 141 0 0 chr17 10909816 10910121 -74528359 - AluSx SINE Alu -7 305 1 2612 40 0 3 chr17 10910558 10910855 -74527625 - AluY SINE Alu -15 296 1 669 266 29 34 chr17 10911245 10911452 -74527028 - MIR SINE MIR -51 211 6 491 255 79 123 chr17 10911583 10911668 -74526812 + L2 LINE L2 2677 2764 -508 2424 58 41 0 chr17 10911668 10911961 -74526519 - AluYa5 SINE Alu -6 305 1 491 255 79 123 chr17 10911961 10912407 -74526073 + L2 LINE L2 2764 3185 -87 2044 144 3 3 chr17 10912407 10912706 -74525774 - AluSx SINE Alu -13 299 1 491 255 79 123 chr17 10912706 10912755 -74525725 + L2 LINE L2 3185 3235 -37 370 285 78 6 chr17 10912953 10913108 -74525372 - MIR SINE MIR -55 207 44 185 287 198 0 chr17 10913963 10914064 -74524416 - MIR3 SINE MIR 0 208 88 226 318 47 0 chr17 10915622 10915707 -74522773 + MIR SINE MIR 65 153 -109 2125 120 7 13 chr17 10915761 10916061 -74522419 - AluSq SINE Alu -15 298 1 261 303 0 0 chr17 10916539 10916605 -74521875 - MER81 DNA DNA -43 71 6 2311 141 59 26 chr17 10917124 10917573 -74520907 - MLT1C LTR MaLR -8 459 1 206 128 51 0 chr17 10917942 10917981 -74520499 - L2 LINE L2 -8 3305 3265 533 187 285 0 chr17 10918660 10918783 -74519697 + MIR SINE MIR 60 217 -45 1530 58 0 21 chr17 10919294 10919482 -74518998 + AluY SINE Alu 110 293 -18 243 247 79 11 chr17 10919507 10919596 -74518884 + MER113 DNA MER1_type? 149 243 -278 909 174 5 85 chr17 10919601 10919709 -74518771 - MER58A DNA MER1_type -2196 224 109 2173 107 54 48 chr17 10919709 10920082 -74518398 + THE1C LTR MaLR 1 375 0 909 174 5 85 chr17 10920082 10920145 -74518335 - MER58A DNA MER1_type -2311 109 43 1919 120 8 0 chr17 10920145 10920403 -74518077 + AluSx SINE Alu 23 282 -30 231 61 0 0 chr17 10920404 10920437 -74518043 + (CAAAC)n Simple_repeat Simple_repeat 3 35 0 909 174 5 85 chr17 10920437 10920474 -74518006 - MER58A DNA MER1_type -2376 44 30 362 281 100 19 chr17 10920484 10920644 -74517836 + MER113 DNA MER1_type? 247 419 -102 246 254 14 28 chr17 10921228 10921299 -74517181 - MIR SINE MIR -94 114 45 2157 121 3 17 chr17 10921426 10921723 -74516757 - AluSx SINE Alu -19 293 1 21 36 0 0 chr17 10921723 10921751 -74516729 + AT_rich Low_complexity Low_complexity 1 28 0 3668 165 12 49 chr17 10921751 10922338 -74516142 - L1MB3 LINE L1 0 6183 5629 2233 108 0 0 chr17 10922338 10922633 -74515847 - AluSx SINE Alu -17 295 1 3668 165 12 49 chr17 10922633 10922797 -74515683 - L1MB3 LINE L1 -554 5629 5460 2166 69 0 4 chr17 10923706 10923967 -74514513 + AluY SINE Alu 37 296 -15 228 329 38 13 chr17 10924115 10924273 -74514207 - L2 LINE L2 -225 3047 2886 45 0 0 0 chr17 10924359 10924404 -74514076 + AT_rich Low_complexity Low_complexity 1 45 0 2301 97 0 0 chr17 10924404 10924693 -74513787 + AluSg SINE Alu 1 289 -21 251 41 0 61 chr17 10924693 10924742 -74513738 - L1PA8 LINE L1 -1 6171 6126 * 1007 46 0 0 chr17 10924728 10924858 -74513622 + L1P3 LINE L1 5615 5744 -428 414 189 179 0 chr17 10925153 10925259 -74513221 - L1MB1 LINE L1 -38 6151 6027 678 280 75 51 chr17 10925533 10925905 -74512575 + L2 LINE L2 2933 3313 0 629 218 6 32 chr17 10926697 10926853 -74511627 - MLT1A1 LTR MaLR 0 365 214 198 288 41 0 chr17 10926855 10926928 -74511552 - MIR SINE MIR -158 104 29 2366 96 0 0 chr17 10926933 10927226 -74511254 - AluSg SINE Alu -17 293 1 595 264 86 84 chr17 10927762 10928250 -74510230 - MLT1J LTR MaLR -20 491 3 1863 171 37 100 chr17 10928410 10928519 -74509961 + MLT1D LTR MaLR 1 115 -390 2268 171 8 0 chr17 10928519 10928904 -74509576 + MLT1B LTR MaLR 1 388 -2 1863 171 37 100 chr17 10928904 10929332 -74509148 + MLT1D LTR MaLR 115 504 -1 209 351 34 34 chr17 10929352 10929500 -74508980 - L2 LINE L2 -1067 2247 2100 2143 126 0 0 chr17 10930938 10931239 -74507241 - AluSx SINE Alu -10 302 2 308 314 100 18 chr17 10931531 10931751 -74506729 + MIR SINE MIR 19 256 -6 550 285 168 14 chr17 10931948 10932162 -74506318 + MIR SINE MIR 16 262 0 2260 112 0 3 chr17 10936575 10936887 -74501593 - AluSx SINE Alu -1 311 1 670 297 38 0 chr17 10936916 10937101 -74501379 + MIR SINE MIR 59 250 -12 524 287 66 6 chr17 10937158 10937350 -74501130 - MIR SINE MIR -32 230 26 2298 112 3 0 chr17 10937439 10937735 -74500745 - AluSp SINE Alu -16 297 1 2511 96 0 0 chr17 10938085 10938398 -74500082 - AluSq SINE Alu 0 313 1 187 333 51 34 chr17 10939815 10939932 -74498548 + L3 LINE CR1 1222 1340 -237 195 297 47 0 chr17 10940100 10940164 -74498316 - MIR3 SINE MIR -50 158 92 450 29 44 0 chr17 10940581 10940649 -74497831 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 567 278 78 22 chr17 10940984 10941214 -74497266 + MIR SINE MIR 20 262 0 213 245 57 0 chr17 10941214 10941267 -74497213 + MIR SINE MIR 96 151 -57 748 207 5 92 chr17 10941414 10941631 -74496849 - MER20 DNA MER1_type 0 219 22 199 356 87 9 chr17 10941657 10941772 -74496708 + L2 LINE L2 3132 3255 -17 1427 209 95 50 chr17 10941909 10942350 -74496130 + MLT1C LTR MaLR 7 467 0 672 223 102 51 chr17 10942660 10942819 -74495661 + L1ME3A LINE L1 5881 6061 -109 2405 81 3 3 chr17 10942819 10943116 -74495364 - AluSp SINE Alu -16 297 1 672 223 102 51 chr17 10943116 10943230 -74495250 + L1ME3A LINE L1 6061 6168 -2 308 256 66 33 chr17 10943231 10943352 -74495128 + L1MC5 LINE L1 7508 7632 -329 2078 241 98 39 chr17 10943699 10944090 -74494390 + L1ME2 LINE L1 4846 5213 -951 2048 130 3 20 chr17 10944090 10944389 -74494091 + AluSx SINE Alu 1 294 -18 2078 241 98 39 chr17 10944389 10945210 -74493270 + L1ME2 LINE L1 5213 6127 -37 2394 93 3 0 chr17 10945210 10945512 -74492968 - AluY SINE Alu -7 304 2 787 260 12 53 chr17 10945879 10946148 -74492332 - MIR SINE MIR 0 262 7 261 267 93 0 chr17 10946431 10946506 -74491974 - MIR SINE MIR -70 192 111 2343 100 3 0 chr17 10946527 10946826 -74491654 - AluSq SINE Alu -13 300 1 772 214 21 11 chr17 10947012 10947199 -74491281 + MER53 DNA DNA 1 189 0 349 253 11 21 chr17 10950203 10950298 -74488182 - MIR SINE MIR -10 252 159 387 238 69 75 chr17 10950312 10950472 -74488008 + MIR SINE MIR 74 232 -30 590 239 9 0 chr17 10950841 10950954 -74487526 + MER81 DNA DNA 1 114 0 1926 131 7 30 chr17 10951068 10951366 -74487114 - AluJb SINE Alu -21 291 1 22 0 0 0 chr17 10951502 10951524 -74486956 + AT_rich Low_complexity Low_complexity 1 22 0 251 129 129 59 chr17 10951530 10951615 -74486865 - L1MC5 LINE L1 -44 7917 7827 1021 129 19 57 chr17 10951645 10951705 -74486775 + Tigger2 DNA MER2_type 1 62 -2656 1774 174 7 3 chr17 10951705 10951998 -74486482 - AluJo SINE Alu -18 294 1 1021 129 19 57 chr17 10951998 10952146 -74486334 + Tigger2 DNA MER2_type 62 201 -2517 1926 99 64 32 chr17 10952146 10952428 -74486052 + AluY SINE Alu 1 291 -20 694 229 14 0 chr17 10952460 10952604 -74485876 + Tigger2 DNA MER2_type 2564 2709 -9 2013 150 7 3 chr17 10952821 10953128 -74485352 - AluJo SINE Alu -4 308 1 321 327 34 14 chr17 10953140 10953348 -74485132 - L1MC5 LINE L1 -371 7590 7379 218 300 50 12 chr17 10953362 10953442 -74485038 + L2 LINE L2 3172 3254 -18 2375 87 7 3 chr17 10953633 10953973 -74484507 - AluY SINE Alu 0 341 1 2653 147 10 77 chr17 10953973 10954559 -74483921 + LTR36 LTR ERV1 9 555 -56 225 0 0 0 chr17 10955132 10955157 -74483323 + (T)n Simple_repeat Simple_repeat 1 25 0 979 193 0 0 chr17 10956441 10956612 -74481868 + AluJb SINE Alu 130 300 -12 1929 142 0 10 chr17 10956665 10956954 -74481526 + AluSq SINE Alu 26 311 -2 216 233 0 0 chr17 10957030 10957103 -74481377 + (TGG)n Simple_repeat Simple_repeat 3 75 0 747 209 0 0 chr17 10957115 10957641 -74480839 + (TGG)n Simple_repeat Simple_repeat 1 526 0 338 346 0 0 chr17 10957682 10957818 -74480662 + (TGG)n Simple_repeat Simple_repeat 3 138 0 250 202 11 11 chr17 10957836 10957925 -74480555 + (TGG)n Simple_repeat Simple_repeat 1 89 0 2455 56 0 20 chr17 10958540 10958843 -74479637 - AluY SINE Alu -14 297 1 665 160 9 0 chr17 10958888 10958994 -74479486 - U6 snRNA snRNA 0 107 1 2281 114 0 3 chr17 10959496 10959794 -74478686 - AluSq SINE Alu -16 297 1 241 247 32 112 chr17 10960693 10960812 -74477668 + MIR3 SINE MIR 7 108 -127 4529 46 0 0 chr17 10960812 10961352 -74477128 - L1PA5 LINE L1 0 6154 5615 241 247 32 112 chr17 10961352 10961397 -74477083 + MIR3 SINE MIR 108 155 -80 225 247 161 0 chr17 10962268 10962349 -74476131 + L2 LINE L2 2067 2160 -1154 321 248 106 21 chr17 10963302 10963443 -74475037 - L2 LINE L2 -1 3312 3160 1155 333 105 20 chr17 10963460 10963613 -74474867 + L2 LINE L2 1920 2059 -1255 2139 132 30 48 chr17 10963613 10963984 -74474496 - THE1B LTR MaLR 0 364 1 1155 333 105 20 chr17 10963984 10964571 -74473909 + L2 LINE L2 2059 2723 -591 266 150 25 38 chr17 10964815 10964895 -74473585 + CT-rich Low_complexity Low_complexity 2 80 0 2375 150 36 20 chr17 10964899 10965338 -74473142 - L1MA9 LINE L1 -4 6308 5863 2755 96 0 3 chr17 10965338 10965694 -74472786 + THE1A LTR MaLR 1 355 0 230 228 38 13 chr17 10965936 10966015 -74472465 + MLT1L LTR MaLR 535 615 0 321 346 107 27 chr17 10966127 10966500 -74471980 + L2 LINE L2 2866 3268 -4 250 324 0 29 chr17 10966506 10966611 -74471869 - L2 LINE L2 -177 3095 2994 263 181 11 64 chr17 10967588 10967682 -74470798 + GA-rich Low_complexity Low_complexity 2 90 0 1582 236 64 18 chr17 10968002 10968338 -74470142 - MLT1D LTR MaLR -45 460 98 2008 132 76 20 chr17 10968338 10968680 -74469800 + THE1B LTR MaLR 4 364 0 1582 236 64 18 chr17 10968680 10968779 -74469701 - MLT1D LTR MaLR -407 98 5 291 238 140 20 chr17 10968923 10969031 -74469449 + MIR SINE MIR 46 162 -46 186 224 0 0 chr17 10969087 10969136 -74469344 + T-rich Low_complexity Low_complexity 3 51 0 3629 61 2 7 chr17 10969568 10970030 -74468450 - L1PA8 LINE L1 -1 6171 5712 316 297 142 7 chr17 10970448 10970596 -74467884 + MIR SINE MIR 23 190 -72 435 297 97 7 chr17 10971667 10971822 -74466658 + MIR SINE MIR 20 188 -74 1265 218 65 58 chr17 10973286 10973699 -74464781 + L1ME2 LINE L1 5740 6155 -9 2636 80 3 6 chr17 10973759 10974109 -74464371 - L1PA8A LINE L1 0 6131 5783 217 336 87 0 chr17 10974923 10975027 -74463453 - L2 LINE L2 -13 3259 3147 2397 95 20 0 chr17 10975131 10975435 -74463045 + AluSg SINE Alu 1 310 0 1600 149 45 31 chr17 10975919 10976207 -74462273 + AluJb SINE Alu 1 292 -20 543 235 31 43 chr17 10976216 10976378 -74462102 - MIR SINE MIR -26 236 77 353 274 39 92 chr17 10976679 10976832 -74461648 + L2 LINE L2 3123 3267 -5 192 379 19 10 chr17 10977835 10977938 -74460542 + L2 LINE L2 2932 3035 -237 435 314 65 53 chr17 10978269 10978607 -74459873 - MLT1H LTR MaLR -205 344 3 314 278 41 21 chr17 10978731 10978828 -74459652 + L2 LINE L2 3174 3272 0 222 292 45 45 chr17 10978823 10978912 -74459568 - L2 LINE L2 -25 3288 3200 * 305 255 101 43 chr17 10979849 10980037 -74458443 + MIR SINE MIR 64 262 0 404 299 37 49 chr17 10980112 10980276 -74458204 + MIR3 SINE MIR 10 171 -37 285 221 8 102 chr17 10981013 10981140 -74457340 + MIR3 SINE MIR 43 157 -51 * 351 161 12 12 chr17 10981125 10981206 -74457274 - L2 LINE L2 -2506 808 728 2008 157 0 0 chr17 10982044 10982343 -74456137 - AluSx SINE Alu -13 299 1 204 319 0 0 chr17 10982406 10982453 -74456027 + L2 LINE L2 3134 3180 -92 740 288 134 11 chr17 10982548 10982877 -74455603 - L2 LINE L2 -220 3093 2725 354 61 0 0 chr17 10982879 10982928 -74455552 + (GA)n Simple_repeat Simple_repeat 2 50 0 3776 279 85 30 chr17 10982960 10984871 -74453609 - L2 LINE L2 -950 2364 349 407 293 62 47 chr17 10984981 10985237 -74453243 + MIR SINE MIR 1 260 -2 406 278 88 16 chr17 10985282 10985476 -74453004 - L2 LINE L2 -2955 359 152 225 0 0 0 chr17 10986281 10986306 -74452174 + (T)n Simple_repeat Simple_repeat 1 25 0 269 284 30 0 chr17 10986349 10986416 -74452064 + Charlie8 DNA MER1_type 175 243 -2174 2383 92 16 3 chr17 10986460 10986766 -74451714 - AluSq SINE Alu -3 310 1 2888 136 45 0 chr17 10986840 10987303 -74451177 - L1PA16 LINE L1 -3 6163 5680 647 99 0 0 chr17 10987304 10987385 -74451095 - 5S rRNA rRNA -34 87 7 5680 158 6 62 chr17 10987386 10989080 -74449400 - L1PA16 LINE L1 -481 5685 4098 234 0 0 0 chr17 10989527 10989553 -74448927 + (TG)n Simple_repeat Simple_repeat 2 27 0 341 257 44 9 chr17 10989677 10989790 -74448690 + MIR SINE MIR 73 189 -73 317 280 58 111 chr17 10990277 10990520 -74447960 - L2 LINE L2 -12 3260 3031 318 160 0 0 chr17 10990520 10990570 -74447910 + MLT1A1 LTR MaLR 1 50 -315 4079 83 0 0 chr17 10990583 10991115 -74447365 - L1PA13 LINE L1 -2 6161 5630 1718 208 24 15 chr17 10991122 10991454 -74447026 + MLT1A1 LTR MaLR 31 365 0 257 327 26 9 chr17 10991454 10991567 -74446913 - L2 LINE L2 -237 3035 2921 2152 131 0 22 chr17 10992532 10992844 -74445636 + AluSx SINE Alu 3 307 -5 308 103 0 0 chr17 10993655 10993694 -74444786 + MER77 LTR ERV1 105 143 -462 * 2046 165 12 20 chr17 10993692 10994038 -74444442 + MER77 LTR ERV1 263 605 0 210 259 0 0 chr17 10994502 10994556 -74443924 + MIR SINE MIR 179 232 -30 1361 196 310 11 chr17 10994595 10994972 -74443508 + MLT2B1 LTR ERVL 1 490 -64 321 113 25 62 chr17 10995059 10995139 -74443341 + MLT2B1 LTR ERVL 442 518 -2 565 206 0 128 chr17 10995884 10995963 -74442517 + MER5B DNA MER1_type 1 88 -90 2043 92 43 7 chr17 10995963 10996245 -74442235 + AluSx SINE Alu 12 303 -9 565 206 0 128 chr17 10996245 10996369 -74442111 + MER5B DNA MER1_type 88 178 0 1239 147 13 9 chr17 10996919 10997144 -74441336 + L1MB4 LINE L1 5955 6180 0 308 240 21 21 chr17 10997172 10997268 -74441212 - L2 LINE L2 -274 2998 2903 6503 150 15 33 chr17 10997619 10997769 -74440711 - Ricksha_b DNA DNA -1600 1254 1103 2256 104 3 0 chr17 10997769 10998067 -74440413 + AluSg SINE Alu 1 299 -11 6503 150 15 33 chr17 10998067 10999047 -74439433 - Ricksha_b DNA DNA -1751 1103 143 2061 141 29 35 chr17 10999047 10999424 -74439056 - THE1C LTR MaLR 0 375 1 6503 150 15 33 chr17 10999424 10999436 -74439044 - Ricksha_b DNA DNA -2711 143 132 326 346 0 0 chr17 10999444 10999545 -74438935 + MIR3 SINE MIR 54 154 -54 2444 75 0 0 chr17 10999731 11000023 -74438457 + AluY SINE Alu 1 292 -19 320 227 0 0 chr17 11000448 11000514 -74437966 - MER117 DNA MER1_type -47 150 85 277 250 0 0 chr17 11001561 11001625 -74436855 + L1P4 LINE L1 5533 5596 -569 1731 147 10 51 chr17 11003135 11003448 -74435032 + AluJo SINE Alu 1 300 -12 240 293 0 0 chr17 11003508 11003566 -74434914 + L2 LINE L2 2236 2293 -1021 1182 262 86 33 chr17 11003868 11004437 -74434043 - HAL1 LINE L1 -818 1689 1091 7759 31 6 0 chr17 11004469 11005530 -74432950 - L1PA3 LINE L1 -3 6152 5090 7027 26 39 0 chr17 11005530 11006367 -74432113 + L1PA3 LINE L1 4223 5092 -1054 3013 168 11 2 chr17 11006635 11007164 -74431316 - L1MB3 LINE L1 0 6183 5650 953 194 12 0 chr17 11007170 11007335 -74431145 - FAM SINE Alu -8 167 1 2317 103 3 0 chr17 11008095 11008395 -74430085 + AluSx SINE Alu 1 301 -11 2167 108 4 0 chr17 11009018 11009297 -74429183 + AluSp SINE Alu 1 280 -33 193 29 59 0 chr17 11009299 11009333 -74429147 + (CAA)n Simple_repeat Simple_repeat 1 36 0 559 204 72 28 chr17 11009583 11009764 -74428716 - L1ME2 LINE L1 -19 6145 5957 939 246 36 71 chr17 11009792 11010288 -74428192 - PABL_B LTR ERV1 -42 625 3 2478 81 0 3 chr17 11010393 11010702 -74427778 - AluY SINE Alu -1 310 3 910 219 108 14 chr17 11010713 11010992 -74427488 - L1ME2 LINE L1 -260 5904 5600 313 279 87 33 chr17 11010996 11011179 -74427301 - L1ME2 LINE L1 -1712 4434 4242 2083 78 4 0 chr17 11011424 11011679 -74426801 - AluY SINE Alu -55 256 1 412 260 32 52 chr17 11011720 11011874 -74426606 - L2 LINE L2 -15 3298 3148 2192 108 47 0 chr17 11011936 11012232 -74426248 + AluSx SINE Alu 1 310 -2 2313 147 65 161 chr17 11012766 11013571 -74424909 - LTR8A LTR ERV1 0 727 1 201 271 0 153 chr17 11014210 11014257 -74424223 + L2 LINE L2 3192 3212 -101 763 228 68 55 chr17 11014257 11014476 -74424004 + MER58A DNA MER1_type 3 224 0 201 271 0 153 chr17 11014476 11014546 -74423934 + L2 LINE L2 3212 3291 -22 288 331 70 7 chr17 11014778 11014920 -74423560 + L2 LINE L2 3121 3271 -1 24 0 0 0 chr17 11015235 11015259 -74423221 + AT_rich Low_complexity Low_complexity 1 24 0 2334 86 10 22 chr17 11015259 11015572 -74422908 + AluSq SINE Alu 1 309 -4 180 0 0 0 chr17 11015572 11015592 -74422888 + (TA)n Simple_repeat Simple_repeat 2 21 0 1034 137 122 20 chr17 11015597 11015794 -74422686 - L1PB3 LINE L1 -7 6147 5931 535 235 61 0 chr17 11016086 11016218 -74422262 + L1M4 LINE L1 5597 5736 -438 7523 168 60 28 chr17 11016218 11017742 -74420738 + MER4B-int LTR ERV1 3090 4662 -2096 2219 163 62 71 chr17 11017759 11018263 -74420217 + MER4B-int LTR ERV1 5264 5814 -944 5534 78 24 25 chr17 11018263 11018389 -74420091 + MER4E LTR ERV1 1 126 -640 2250 119 6 0 chr17 11018389 11018700 -74419780 - AluSq SINE Alu 0 313 1 5534 78 24 25 chr17 11018700 11019340 -74419140 + MER4E LTR ERV1 126 766 0 2219 163 62 71 chr17 11019340 11019589 -74418891 + MER4B-int LTR ERV1 5814 6064 -694 2458 162 92 0 chr17 11019599 11020013 -74418467 + LTR47A LTR ERVL 1 452 0 2201 123 0 0 chr17 11020135 11020435 -74418045 - AluSx SINE Alu -12 300 1 3861 288 110 14 chr17 11022432 11024036 -74414444 + L2 LINE L2 10 1766 -1548 323 223 143 54 chr17 11024034 11024122 -74414358 - L2 LINE L2 -1390 1924 1823 * 2029 111 4 0 chr17 11024122 11024392 -74414088 + AluSg SINE Alu 39 309 -1 323 223 143 54 chr17 11024392 11024415 -74414065 - L2 LINE L2 -1491 1823 1803 677 256 135 19 chr17 11025313 11025579 -74412901 - MER102b DNA MER1_type -25 316 20 812 205 6 0 chr17 11025963 11026320 -74412160 + (CTCA)n Simple_repeat Simple_repeat 1 358 0 1045 268 89 33 chr17 11026327 11027036 -74411444 - L2 LINE L2 -3 3310 2642 519 60 0 0 chr17 11027036 11027103 -74411377 + (TA)n Simple_repeat Simple_repeat 2 68 0 2207 84 11 0 chr17 11027105 11027391 -74411089 - AluSc SINE Alu -20 289 1 1045 268 89 33 chr17 11027391 11027434 -74411046 - L2 LINE L2 -671 2642 2504 2526 66 0 28 chr17 11028262 11028582 -74409898 - AluY SINE Alu 0 311 1 180 259 86 0 chr17 11028720 11028778 -74409702 + MIR SINE MIR 124 186 -76 267 246 0 14 chr17 11029058 11029127 -74409353 + GA-rich Low_complexity Low_complexity 4 71 0 205 345 0 0 chr17 11030433 11030488 -74407992 - L2 LINE L2 -97 3175 3121 1148 312 101 26 chr17 11030565 11030807 -74407673 - L2 LINE L2 -428 2886 2663 2280 85 0 19 chr17 11030807 11031123 -74407357 - AluY SINE Alu -1 310 1 1148 312 101 26 chr17 11031123 11031674 -74406806 - L2 LINE L2 -651 2663 2034 540 313 0 12 chr17 11032131 11032291 -74406189 + MER5B DNA MER1_type 21 178 0 441 316 59 0 chr17 11033786 11033938 -74404542 - MIR SINE MIR -14 248 88 386 125 0 0 chr17 11033938 11033994 -74404486 - MER20 DNA MER1_type -163 56 1 2279 129 92 32 chr17 11034168 11034572 -74403908 - MSTA LTR MaLR 0 428 1 2065 267 25 15 chr17 11034574 11035094 -74403386 - MER69 DNA AcHobo -698 528 4 1814 113 3 93 chr17 11035858 11036212 -74402268 - AluSx SINE Alu 0 326 1 252 0 0 0 chr17 11036343 11036371 -74402109 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 287 287 78 0 chr17 11037706 11037821 -74400659 + MIR SINE MIR 13 137 -71 270 235 0 44 chr17 11037825 11037893 -74400587 - L2 LINE L2 -1 3271 3207 405 0 0 0 chr17 11038503 11038548 -74399932 + (TG)n Simple_repeat Simple_repeat 2 46 0 2152 111 7 0 chr17 11038548 11038836 -74399644 - AluSg1 SINE Alu -19 290 1 23 54 0 0 chr17 11038840 11038877 -74399603 + AT_rich Low_complexity Low_complexity 1 37 0 382 263 45 39 chr17 11039064 11039243 -74399237 - L1MC/D LINE L1 -1988 5820 5641 585 216 9 26 chr17 11039611 11039727 -74398753 + MER81 DNA DNA 1 114 0 2207 95 0 3 chr17 11041601 11041906 -74396574 + AluSc SINE Alu 1 304 0 183 405 13 0 chr17 11042375 11042454 -74396026 + L3 LINE CR1 1497 1576 -1 1834 174 9 22 chr17 11044331 11044647 -74393833 + AluJb SINE Alu 1 312 0 2398 104 4 21 chr17 11044658 11045372 -74393108 + AluY SINE Alu 1 310 -1 270 343 57 0 chr17 11046358 11046463 -74392017 - L2 LINE L2 -4 3268 3158 967 224 91 118 chr17 11046590 11047054 -74391426 + MLT1K LTR MaLR 133 583 -5 192 344 53 46 chr17 11047150 11047281 -74391199 - L2 LINE L2 -193 3079 2948 1966 127 30 23 chr17 11047302 11047602 -74390878 - AluSx SINE Alu -10 302 1 290 281 226 20 chr17 11047864 11048010 -74390470 + MER5B DNA MER1_type 3 178 0 508 314 71 51 chr17 11048164 11048514 -74389966 - L2 LINE L2 -7 3306 2950 * 1622 263 112 16 chr17 11048508 11049087 -74389393 - L2 LINE L2 -810 2504 1870 6880 234 36 46 chr17 11049286 11050446 -74388034 - L1MCa LINE L1 -1530 4896 3726 2031 122 4 0 chr17 11050446 11050761 -74387719 - AluSg1 SINE Alu 0 316 1 6880 234 36 46 chr17 11050761 11052195 -74386285 - L1MCa LINE L1 -2700 3726 2393 772 196 80 18 chr17 11052193 11052638 -74385842 - L1MCa LINE L1 -4236 2190 1289 * 1898 116 55 10 chr17 11052640 11052932 -74385548 - AluSx SINE Alu -7 305 1 213 276 17 0 chr17 11053116 11053174 -74385306 + GA-rich Low_complexity Low_complexity 2 60 0 486 246 84 18 chr17 11053325 11053555 -74384925 + MIR SINE MIR 11 262 0 2133 132 3 0 chr17 11053730 11054040 -74384440 - AluSq SINE Alu -2 311 1 1727 192 17 59 chr17 11054095 11054502 -74383978 - MLT1B LTR MaLR 0 390 1 263 185 0 37 chr17 11055068 11055122 -74383358 - L2 LINE L2 0 3313 3262 316 291 76 32 chr17 11055723 11055881 -74382599 + L2 LINE L2 3118 3282 -31 375 269 50 62 chr17 11056279 11056439 -74382041 + MER117 DNA MER1_type 11 168 -29 1307 236 20 16 chr17 11056558 11056907 -74381573 - L1ME1 LINE L1 0 6166 5820 536 0 16 0 chr17 11057072 11057136 -74381344 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 494 294 59 11 chr17 11058457 11058644 -74379836 - MIR SINE MIR -38 224 29 1635 184 7 3 chr17 11058987 11059291 -74379189 - AluJo SINE Alu 0 305 1 455 286 78 10 chr17 11059299 11059491 -74378989 - L1ME3A LINE L1 -312 5858 5654 1200 279 74 24 chr17 11059500 11059526 -74378954 + MER20B DNA MER1_type 36 59 -724 2244 123 0 0 chr17 11059526 11059826 -74378654 - AluSx SINE Alu -12 300 1 1200 279 74 24 chr17 11059826 11060261 -74378219 + MER20B DNA MER1_type 59 520 -263 1756 150 18 47 chr17 11060293 11060708 -74377772 + L1MB3 LINE L1 5207 5609 -571 723 209 10 46 chr17 11060720 11060916 -74377564 + L1PBa LINE L1 6 194 -6669 9474 168 93 13 chr17 11060916 11064267 -74374213 + L1PBa LINE L1 906 4525 -2337 2098 161 6 8 chr17 11064270 11064605 -74373875 + L1MB3 LINE L1 5818 6153 -30 2489 66 0 3 chr17 11064605 11064908 -74373572 + AluY SINE Alu 1 302 -9 2098 161 6 8 chr17 11064908 11064927 -74373553 + L1MB3 LINE L1 6153 6171 -12 28 29 0 0 chr17 11064965 11065000 -74373480 + AT_rich Low_complexity Low_complexity 1 35 0 579 226 7 7 chr17 11065246 11065383 -74373097 + MER20B DNA MER1_type 647 783 0 444 313 28 28 chr17 11065383 11065597 -74372883 - L1ME3A LINE L1 -506 5656 5443 285 272 10 48 chr17 11065570 11065602 -74372878 - L1ME3A LINE L1 -1157 4989 4957 * 2088 166 82 20 chr17 11065602 11066005 -74372475 + MSTA LTR MaLR 1 428 0 285 272 10 48 chr17 11066005 11066075 -74372405 - L1ME3A LINE L1 -1189 4957 4891 1585 121 60 4 chr17 11066169 11066418 -74372062 - L1MA5A LINE L1 0 6297 6035 253 147 0 73 chr17 11066421 11066489 -74371991 - L1ME3A LINE L1 -1310 4836 4774 26 30 0 0 chr17 11066706 11066739 -74371741 + AT_rich Low_complexity Low_complexity 1 33 0 2047 191 14 19 chr17 11068019 11068386 -74370094 + MLT1A1 LTR MaLR 1 365 0 1080 256 78 80 chr17 11069041 11069565 -74368915 + L1MCa LINE L1 385 907 -5515 5906 160 49 14 chr17 11069598 11071529 -74366951 + L1PA16 LINE L1 1344 6961 0 2040 222 167 45 chr17 11071521 11072373 -74366107 + L1MCa LINE L1 2003 2958 -3983 * 557 141 0 0 chr17 11072365 11072450 -74366030 + L1PA11 LINE L1 6069 6153 -21 * 1068 299 53 14 chr17 11072492 11072980 -74365500 + L1MCa LINE L1 2960 3466 -3475 * 1633 174 317 27 chr17 11072976 11073499 -74364981 + L1MC3 LINE L1 5270 5944 -1841 216 23 23 47 chr17 11073523 11073566 -74364914 + (TA)n Simple_repeat Simple_repeat 1 42 0 199 0 0 61 chr17 11073636 11073669 -74364811 + (TA)n Simple_repeat Simple_repeat 2 32 0 23 0 0 0 chr17 11074218 11074241 -74364239 + AT_rich Low_complexity Low_complexity 1 23 0 2410 81 3 0 chr17 11074287 11074583 -74363897 - AluSp SINE Alu -16 297 1 235 333 39 0 chr17 11074620 11074698 -74363782 + HAL1 LINE L1 4 84 -2423 705 262 99 0 chr17 11074812 11075045 -74363435 + MLT1H1 LTR MaLR 293 548 -7 228 273 36 18 chr17 11075073 11075183 -74363297 + HAL1 LINE L1 2009 2120 -387 270 81 0 0 chr17 11075225 11075262 -74363218 + (TG)n Simple_repeat Simple_repeat 2 38 0 1309 229 114 35 chr17 11075317 11075789 -74362691 + MER39 LTR ERV1 21 707 0 2349 110 3 0 chr17 11075873 11076183 -74362297 - AluSx SINE Alu -1 311 1 347 349 8 0 chr17 11076447 11076576 -74361904 + MIR3 SINE MIR 48 177 -31 390 209 117 37 chr17 11076595 11076758 -74361722 + L1ME4a LINE L1 5718 5893 -228 191 268 18 0 chr17 11076938 11076994 -74361486 + L2 LINE L2 3035 3091 -181 1039 220 96 0 chr17 11077959 11078177 -74360303 + MER8 DNA MER2_type 1 239 0 2354 67 7 7 chr17 11078465 11078764 -74359716 - AluY SINE Alu -12 299 1 383 329 83 62 chr17 11078991 11079413 -74359067 + L2 LINE L2 2834 3264 -8 220 244 0 0 chr17 11079589 11079630 -74358850 - L2 LINE L2 -95 3177 3137 225 224 20 0 chr17 11080353 11080402 -74358078 + L2 LINE L2 3262 3311 -2 223 228 35 0 chr17 11081026 11081083 -74357397 + L2 LINE L2 2993 3051 -221 1124 201 14 151 chr17 11081485 11081547 -74356933 - MLT1A1 LTR MaLR 0 365 296 1959 138 3 0 chr17 11081547 11081864 -74356616 + AluSg SINE Alu 1 318 0 1124 201 14 151 chr17 11081864 11082223 -74356257 - MLT1A1 LTR MaLR -69 296 1 456 256 16 16 chr17 11083549 11083678 -74354802 + MLT1I LTR MaLR 275 403 -6 2675 165 4 29 chr17 11083733 11084212 -74354268 - MLT1C LTR MaLR 0 467 1 216 202 10 40 chr17 11084316 11084415 -74354065 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 228 111 0 0 chr17 11085568 11085604 -74352876 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 245 300 14 0 chr17 11085858 11085928 -74352552 - MIR SINE MIR -113 149 79 271 279 67 10 chr17 11085973 11086077 -74352403 - L3 LINE CR1 -205 1372 1263 251 281 68 5 chr17 11086661 11086800 -74351680 - MIR3 SINE MIR -44 164 12 189 309 12 12 chr17 11086899 11086980 -74351500 + MIR SINE MIR 164 244 -18 658 327 52 22 chr17 11087177 11087584 -74350896 + L2 LINE L2 1941 2359 -955 2231 113 3 0 chr17 11087594 11087887 -74350593 + AluSq SINE Alu 1 294 -19 331 325 18 43 chr17 11087955 11088118 -74350362 - L2 LINE L2 0 3313 3155 486 266 57 13 chr17 11088131 11088289 -74350191 + L2 LINE L2 2378 2542 -772 33 0 0 0 chr17 11088791 11088824 -74349656 + AT_rich Low_complexity Low_complexity 1 33 0 332 191 16 0 chr17 11089640 11089703 -74348777 + MER69 DNA AcHobo 4 67 -2459 2320 93 0 13 chr17 11089936 11090249 -74348231 + AluSc SINE Alu 1 309 0 333 186 0 0 chr17 11090963 11091022 -74347458 - MER69 DNA AcHobo -2461 65 7 291 246 212 0 chr17 11092184 11092302 -74346178 - MER5A DNA MER1_type -1 188 46 347 169 14 0 chr17 11092327 11092398 -74346082 + MER5A DNA MER1_type 4 75 -114 1503 150 3 88 chr17 11092398 11092704 -74345776 + AluJo SINE Alu 2 281 -31 2498 83 0 0 chr17 11092704 11093003 -74345477 - AluY SINE Alu -11 300 1 295 149 0 0 chr17 11093038 11093085 -74345395 + MER5A DNA MER1_type 67 113 -76 2350 81 13 7 chr17 11094712 11095010 -74343470 - AluSg1 SINE Alu -9 300 1 246 95 0 0 chr17 11095868 11095910 -74342570 + (T)n Simple_repeat Simple_repeat 1 42 0 585 259 44 60 chr17 11096383 11096634 -74341846 - LTR33A LTR ERVL -2 521 275 567 0 0 0 chr17 11096704 11096767 -74341713 + (CTG)n Simple_repeat Simple_repeat 1 63 0 221 297 16 78 chr17 11096974 11097102 -74341378 - L2 LINE L2 -3 3269 3150 387 0 0 0 chr17 11097119 11097162 -74341318 + (T)n Simple_repeat Simple_repeat 1 43 0 184 219 0 0 chr17 11097740 11097781 -74340699 + MIR SINE MIR 87 127 -81 182 264 207 11 chr17 11098867 11098923 -74339557 - MER5A DNA MER1_type -7 182 138 2234 118 0 0 chr17 11098923 11099219 -74339261 + AluSx SINE Alu 1 296 -16 182 264 207 11 chr17 11099219 11099249 -74339231 - MER5A DNA MER1_type -51 138 79 194 318 56 9 chr17 11099518 11099625 -74338855 - MIR3 SINE MIR -1 207 96 403 225 116 29 chr17 11099848 11099986 -74338494 - Charlie8 DNA MER1_type -2267 150 1 2283 110 7 0 chr17 11100129 11100428 -74338052 + AluSq SINE Alu 1 301 -12 2085 242 99 25 chr17 11100752 11100969 -74337511 - L1ME3A LINE L1 -9 6161 5961 309 26 0 0 chr17 11100969 11101007 -74337473 + (TG)n Simple_repeat Simple_repeat 1 38 0 2085 242 99 25 chr17 11101007 11101749 -74336731 - L1ME3A LINE L1 -209 5961 5030 533 263 166 0 chr17 11101854 11102071 -74336409 + MIR SINE MIR 10 262 0 208 231 0 0 chr17 11102100 11102139 -74336341 + polypurine Low_complexity Low_complexity 3 41 0 540 224 180 12 chr17 11102572 11102733 -74335747 - MER5A DNA MER1_type -1 188 1 1652 185 64 0 chr17 11102742 11103040 -74335440 + MER58B DNA MER1_type 2 318 -23 5488 143 33 11 chr17 11103310 11104213 -74334267 + MER49 LTR ERV1 1 923 0 248 170 0 0 chr17 11104962 11105009 -74333471 - MIR SINE MIR -65 143 97 783 286 122 20 chr17 11105843 11106235 -74332245 + MLT1K LTR MaLR 100 531 -57 907 133 12 75 chr17 11106327 11106500 -74331980 + FRAM SINE Alu 2 163 -13 926 279 30 70 chr17 11107989 11108415 -74330065 + MLT1I LTR MaLR 1 409 0 5585 145 7 29 chr17 11110381 11110641 -74327839 + MER49 LTR ERV1 2 266 -657 2438 53 0 0 chr17 11110641 11110965 -74327515 + AluY SINE Alu 1 324 0 5585 145 7 29 chr17 11110965 11111645 -74326835 + MER49 LTR ERV1 266 923 0 198 143 0 0 chr17 11111774 11111809 -74326671 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1755 274 101 21 chr17 11111814 11112387 -74326093 - L2 LINE L2 -7 3306 2780 2094 104 30 0 chr17 11112387 11112656 -74325824 + AluSc SINE Alu 1 277 -32 1755 274 101 21 chr17 11112656 11113313 -74325167 - L2 LINE L2 -533 2780 1969 529 332 114 7 chr17 11114112 11114401 -74324079 + L2 LINE L2 2471 2790 -524 209 340 83 33 chr17 11114416 11114657 -74323823 + L2 LINE L2 3001 3253 -60 427 235 44 37 chr17 11115461 11115597 -74322883 - MER5B DNA MER1_type -25 153 17 238 209 0 0 chr17 11115619 11115662 -74322818 - MIR SINE MIR -56 152 110 284 243 78 19 chr17 11115689 11115792 -74322688 - HAL1b LINE L1 -614 734 626 373 218 10 59 chr17 11115959 11116060 -74322420 - MER5A DNA MER1_type -85 104 9 320 296 114 50 chr17 11116203 11116423 -74322057 + MLT1K LTR MaLR 283 516 -72 987 256 102 71 chr17 11116968 11117362 -74321118 - MLT1F LTR MaLR 0 542 137 1511 199 7 28 chr17 11117553 11117835 -74320645 - AluJb SINE Alu -36 276 1 2184 100 0 21 chr17 11119057 11119347 -74319133 + AluSg SINE Alu 1 283 -27 190 94 0 0 chr17 11119347 11119379 -74319101 + (CAA)n Simple_repeat Simple_repeat 2 180 0 2158 93 0 0 chr17 11119496 11119764 -74318716 - AluSq SINE Alu -45 268 1 243 0 0 0 chr17 11120580 11120607 -74317873 + (TG)n Simple_repeat Simple_repeat 1 27 0 246 356 78 47 chr17 11120880 11121200 -74317280 + L2 LINE L2 2943 3272 0 488 191 95 0 chr17 11121901 11122006 -74316474 - L1MA10 LINE L1 -16 6318 6204 2343 113 0 0 chr17 11122175 11122484 -74315996 - AluSc SINE Alu 0 309 1 3944 105 11 2 chr17 11123443 11123985 -74314495 + L1PB2 LINE L1 5601 6147 -4 2277 122 3 0 chr17 11123999 11124311 -74314169 + AluSq SINE Alu 1 313 0 1986 159 83 28 chr17 11124495 11124892 -74313588 + MSTA LTR MaLR 1 419 -9 1679 239 97 42 chr17 11124901 11125428 -74313052 - MLT1G LTR MaLR -12 578 23 940 185 0 34 chr17 11125432 11125610 -74312870 - FRAM SINE Alu -5 171 1 203 402 68 0 chr17 11125922 11126039 -74312441 + L2 LINE L2 3140 3264 -8 261 359 0 0 chr17 11126160 11126263 -74312217 + L3 LINE CR1 1231 1333 -244 834 254 11 16 chr17 11126711 11126900 -74311580 + MER5A DNA MER1_type 2 189 0 563 207 71 64 chr17 11127191 11127331 -74311149 + FLAM_A SINE Alu 1 141 -1 553 246 7 25 chr17 11127598 11127741 -74310739 - MIR SINE MIR -62 146 29 23 68 0 0 chr17 11128295 11128339 -74310141 + AT_rich Low_complexity Low_complexity 1 44 0 468 306 30 8 chr17 11128352 11128486 -74309994 + MIR SINE MIR 9 145 -117 1834 243 94 11 chr17 11128489 11129063 -74309417 - MLT2F LTR ERVL -3 660 2 21 71 0 0 chr17 11129358 11129400 -74309080 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr17 11130165 11130187 -74308293 + AT_rich Low_complexity Low_complexity 1 22 0 883 282 24 12 chr17 11130438 11130693 -74307787 + MIR SINE MIR 2 259 -3 2890 7 0 0 chr17 11131694 11132003 -74306477 - AluYa5 SINE Alu -2 309 1 517 281 43 6 chr17 11132583 11132747 -74305733 + MIR SINE MIR 36 205 -57 321 305 26 26 chr17 11133651 11133805 -74304675 - MLT1I LTR MaLR -255 154 1 3540 157 21 116 chr17 11133934 11134152 -74304328 + L1MA10 LINE L1 5508 5745 -589 245 100 20 0 chr17 11134152 11134202 -74304278 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 3540 157 21 116 chr17 11134202 11134894 -74303586 + L1MA10 LINE L1 5745 6331 -3 2097 128 7 0 chr17 11134903 11135200 -74303280 + AluSq SINE Alu 1 299 -14 2139 120 3 0 chr17 11135201 11135493 -74302987 + AluSg SINE Alu 1 293 -17 5996 15 8 0 chr17 11135544 11136192 -74302288 + L1PA4 LINE L1 5503 6155 0 256 185 0 0 chr17 11136213 11136258 -74302222 + MIR SINE MIR 106 150 -58 570 312 94 40 chr17 11136483 11137145 -74301335 + L2 LINE L2 2608 3313 0 1830 152 14 7 chr17 11137843 11138140 -74300340 + AluJb SINE Alu 1 299 -13 2653 154 16 5 chr17 11138573 11138996 -74299484 - MSTA LTR MaLR 0 428 1 369 62 0 0 chr17 11139225 11139273 -74299207 + (TG)n Simple_repeat Simple_repeat 1 48 0 399 279 39 102 chr17 11139332 11139586 -74298894 - MLT1K LTR MaLR -3 585 348 3553 127 27 35 chr17 11140194 11140785 -74297695 - LTR60 LTR ERV1 0 586 1 4065 207 41 32 chr17 11141091 11141945 -74296535 - MER21B LTR ERV1 -1 862 1 3119 143 109 107 chr17 11142328 11143051 -74295429 + LTR8A LTR ERV1 1 725 -2 260 332 54 38 chr17 11143403 11143716 -74294764 - L1M4 LINE L1 -1315 4831 4514 426 307 91 24 chr17 11143791 11144078 -74294402 - L1M4 LINE L1 -1637 4509 4204 292 193 108 24 chr17 11144192 11144275 -74294205 - HAL1b LINE L1 -923 425 336 225 345 212 0 chr17 11144503 11144616 -74293864 + MIR SINE MIR 4 140 -122 1954 252 59 66 chr17 11144616 11145126 -74293354 + L1MB5 LINE L1 3813 4325 -1821 5287 47 0 0 chr17 11145126 11145717 -74292763 + LTR10C LTR ERV1 1 591 0 1954 252 59 66 chr17 11145717 11146003 -74292477 + L1MB5 LINE L1 4325 4612 -1534 2275 99 0 0 chr17 11146003 11146297 -74292183 + AluY SINE Alu 1 294 -17 1954 252 59 66 chr17 11146297 11146843 -74291637 + L1MB5 LINE L1 4612 5072 -1074 2254 206 57 66 chr17 11146843 11147402 -74291078 - MLT2B3 LTR ERVL 0 554 1 1954 252 59 66 chr17 11147402 11147595 -74290885 + L1MB5 LINE L1 5072 5265 -881 1059 146 34 96 chr17 11147596 11147835 -74290645 + L1MB5 LINE L1 5943 6166 -8 * 4683 154 52 19 chr17 11147833 11148709 -74289771 + L1MB5 LINE L1 5270 6174 0 361 224 52 17 chr17 11148711 11148827 -74289653 + MIR SINE MIR 143 262 0 842 263 157 23 chr17 11149250 11149763 -74288717 - MLT2E LTR ERVL 0 628 1 2120 126 3 0 chr17 11149872 11150165 -74288315 + AluSg SINE Alu 1 294 -16 1601 209 81 88 chr17 11150424 11150991 -74287489 - MLT1F1 LTR MaLR 0 567 1 2348 91 3 0 chr17 11151515 11151812 -74286668 - AluSc SINE Alu -11 298 1 1308 237 28 31 chr17 11152372 11152726 -74285754 - MLT1A1 LTR MaLR 0 365 13 256 269 147 58 chr17 11152915 11153071 -74285409 - HAL1b LINE L1 -463 885 716 2147 124 79 22 chr17 11153179 11153534 -74284946 - THE1C LTR MaLR 0 375 1 2311 101 0 21 chr17 11153581 11153818 -74284662 + MER47A DNA MER2_type 37 266 -2057 2426 171 18 37 chr17 11153818 11154252 -74284228 - MSTB LTR MaLR 0 426 1 2311 101 0 21 chr17 11154252 11154351 -74284129 + MER47A DNA MER2_type 266 366 0 382 209 9 48 chr17 11154406 11154511 -74283969 - HAL1b LINE L1 -867 481 381 1668 276 37 54 chr17 11154536 11154755 -74283725 + MLT1E LTR MaLR 7 228 -365 1180 103 43 16 chr17 11154755 11154939 -74283541 + MER53 DNA DNA 1 189 0 1668 276 37 54 chr17 11154939 11155316 -74283164 + MLT1E LTR MaLR 228 593 0 2060 107 3 55 chr17 11155515 11155825 -74282655 - AluSq SINE Alu -19 294 1 1988 140 0 7 chr17 11156637 11156930 -74281550 + AluSx SINE Alu 1 291 -21 303 28 0 0 chr17 11156937 11156973 -74281507 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 2380 61 7 0 chr17 11157431 11157550 -74280930 + AluY SINE Alu 1 118 -193 549 0 0 0 chr17 11157550 11157611 -74280869 + (CA)n Simple_repeat Simple_repeat 2 62 0 2380 61 7 0 chr17 11157611 11157787 -74280693 + AluY SINE Alu 118 298 -13 728 367 38 10 chr17 11157796 11158188 -74280292 + HERV16 LTR ERVL 728 1130 -3866 336 266 64 104 chr17 11158177 11158290 -74280190 + HERV16 LTR ERVL 1246 1362 -4402 * 2610 149 26 33 chr17 11158290 11158491 -74279989 + MSTB LTR MaLR 1 202 -224 2080 94 42 3 chr17 11158491 11158778 -74279702 + AluSg SINE Alu 1 298 -12 2610 149 26 33 chr17 11158778 11159005 -74279475 + MSTB LTR MaLR 202 426 0 336 266 64 104 chr17 11159005 11159237 -74279243 + HERV16 LTR ERVL 1362 1577 -4187 1319 335 36 42 chr17 11159291 11160144 -74278336 + HERV16 LTR ERVL 1570 2417 -2579 1872 175 66 95 chr17 11160145 11160586 -74277894 - MSTC LTR MaLR 0 428 1 4093 250 97 48 chr17 11160592 11162173 -74276307 - MSTC-int LTR MaLR -5 1730 2 2271 194 21 39 chr17 11162177 11162611 -74275869 - MSTC LTR MaLR -2 426 1 755 329 62 23 chr17 11162631 11163063 -74275417 + HERV16 LTR ERVL 2471 2919 -2845 570 289 14 0 chr17 11163094 11163236 -74275244 + MER5A DNA MER1_type 36 179 -10 1167 320 83 52 chr17 11163237 11163605 -74274875 + HERV16 LTR ERVL 3097 3452 -1953 1868 210 20 83 chr17 11163605 11163710 -74274770 - MLT1D LTR MaLR 0 505 395 2021 60 24 0 chr17 11163710 11163960 -74274520 + AluY SINE Alu 39 294 -17 1868 210 20 83 chr17 11163960 11164393 -74274087 - MLT1D LTR MaLR -110 395 1 1167 320 83 52 chr17 11164393 11164523 -74273957 + HERV16 LTR ERVL 3452 3577 -1828 2384 171 0 11 chr17 11164523 11164892 -74273588 - MLT1A1 LTR MaLR 0 365 1 1167 320 83 52 chr17 11164892 11165806 -74272674 + HERV16 LTR ERVL 3577 4527 -878 767 301 69 45 chr17 11165941 11166389 -74272091 + HERV16 LTR ERVL 4779 5237 -527 1053 281 41 0 chr17 11166750 11167042 -74271438 + LTR16C LTR ERVL 186 489 -2 246 32 0 0 chr17 11167710 11167741 -74270739 + (TG)n Simple_repeat Simple_repeat 2 32 0 301 308 55 20 chr17 11167915 11168061 -74270419 - HERV16 LTR ERVL -4483 513 363 4761 25 4 2 chr17 11168162 11168688 -74269792 - L1PA4 LINE L1 -3 6152 5626 7441 26 9 0 chr17 11168689 11169790 -74268690 + L1PA4 LINE L1 4521 5628 -527 341 261 125 88 chr17 11170159 11170304 -74268176 - L1ME LINE L1 -326 5795 5657 2115 156 55 8 chr17 11170304 11170446 -74268034 - L1MA10 LINE L1 -18 6316 6182 345 47 0 0 chr17 11170446 11170489 -74267991 + (TG)n Simple_repeat Simple_repeat 2 44 0 2115 156 55 8 chr17 11170489 11170731 -74267749 - L1MA10 LINE L1 -152 6182 5914 341 261 125 88 chr17 11170731 11170880 -74267600 - L1ME LINE L1 -464 5657 5490 609 294 124 40 chr17 11170898 11171448 -74267032 - L2 LINE L2 -1014 2300 1705 1901 156 71 3 chr17 11171631 11171970 -74266510 - MLT1A1 LTR MaLR 0 365 4 221 186 0 0 chr17 11172271 11172314 -74266166 - L2 LINE L2 0 3313 3271 3332 173 29 3 chr17 11172389 11172979 -74265501 + MER6A DNA MER2_type 1 605 0 1879 89 3 3 chr17 11173142 11173432 -74265048 - THE1B LTR MaLR 0 364 1 241 245 0 88 chr17 11173883 11173985 -74264495 + C-rich Low_complexity Low_complexity 2 94 0 2304 53 3 59 chr17 11176977 11177311 -74261169 - AluY SINE Alu 0 317 1 3402 183 86 55 chr17 11177311 11177921 -74260559 - L1MC3 LINE L1 -158 7627 6981 1919 138 3 7 chr17 11177921 11178203 -74260277 + AluJo SINE Alu 7 287 -25 3402 183 86 55 chr17 11178203 11178462 -74260018 - L1MC3 LINE L1 -804 6981 6731 2360 79 0 16 chr17 11179215 11179530 -74258950 - AluY SINE Alu -1 310 1 25 0 0 0 chr17 11180048 11180073 -74258407 + AT_rich Low_complexity Low_complexity 1 25 0 2182 82 4 0 chr17 11180092 11180362 -74258118 + AluSq SINE Alu 26 296 -17 1604 153 60 14 chr17 11180891 11181172 -74257308 - AluJo SINE Alu -12 300 7 185 143 14 57 chr17 11182756 11182826 -74255654 + GA-rich Low_complexity Low_complexity 3 69 0 1198 131 0 0 chr17 11184588 11184756 -74253724 - Charlie3 DNA MER1_type -2540 170 3 477 312 103 55 chr17 11186602 11187019 -74251461 - MLT1K LTR MaLR -31 557 121 497 241 12 80 chr17 11187851 11188013 -74250467 - MER117 DNA MER1_type -32 165 15 202 250 0 17 chr17 11189002 11189039 -74249441 + (TAA)n Simple_repeat Simple_repeat 3 40 -21 3502 123 111 2 chr17 11189039 11189625 -74248855 - MER39B LTR ERV1 0 653 4 202 250 0 17 chr17 11189625 11189647 -74248833 + (TAA)n Simple_repeat Simple_repeat 40 61 0 882 265 83 66 chr17 11191301 11191690 -74246790 - MLT1G LTR MaLR -190 400 4 926 271 69 45 chr17 11192210 11192760 -74245720 + HAL1 LINE L1 1070 1632 -875 507 109 40 10 chr17 11192761 11192862 -74245618 + GA-rich Low_complexity Low_complexity 1 104 0 277 211 0 0 chr17 11194111 11194163 -74244317 + LTR30 LTR ERV1 1 52 -670 1411 102 7 136 chr17 11194163 11194513 -74243967 + LTR12 LTR ERV1 53 289 -425 250 265 0 0 chr17 11194513 11194581 -74243899 + LTR30 LTR ERV1 556 623 -99 698 172 26 0 chr17 11194585 11194701 -74243779 + LTR12 LTR ERV1 362 480 -234 2758 99 0 0 chr17 11194957 11195320 -74243160 + THE1B LTR MaLR 2 364 0 180 0 0 0 chr17 11195673 11195693 -74242787 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2431 74 0 0 chr17 11195772 11196068 -74242412 + AluY SINE Alu 1 296 -15 243 125 0 0 chr17 11196737 11196777 -74241703 + (A)n Simple_repeat Simple_repeat 1 40 0 1018 263 36 65 chr17 11197295 11197838 -74240642 + MER50 LTR ERV1 1 577 -157 205 316 26 13 chr17 11197972 11198048 -74240432 - L2 LINE L2 -16 3297 3221 216 0 0 0 chr17 11198197 11198221 -74240259 + (T)n Simple_repeat Simple_repeat 1 24 0 182 318 82 59 chr17 11198387 11198557 -74239923 - L2 LINE L2 -505 2809 2636 1634 187 81 9 chr17 11198922 11199269 -74239211 + MLT1C LTR MaLR 1 372 -95 1611 84 0 24 chr17 11199269 11199482 -74238998 - AluSx SINE Alu -18 292 85 673 128 0 20 chr17 11199723 11199825 -74238655 - AluSx SINE Alu -212 101 2 551 206 0 0 chr17 11199825 11199932 -74238548 + MLT1C LTR MaLR 361 467 0 326 213 105 133 chr17 11199940 11200226 -74238254 + L2 LINE L2 3035 3312 -1 997 258 66 23 chr17 11200342 11200734 -74237746 - MLT1G LTR MaLR -200 390 13 192 323 101 30 chr17 11200783 11200882 -74237598 + MER5A DNA MER1_type 61 166 -23 2641 55 0 0 chr17 11201335 11201642 -74236838 + AluY SINE Alu 1 307 -4 1803 119 23 8 chr17 11202135 11202395 -74236085 + AluSx SINE Alu 35 298 -14 407 301 46 0 chr17 11203142 11203295 -74235185 - MIR3 SINE MIR -8 200 41 361 271 0 21 chr17 11203923 11204019 -74234461 - MIR3 SINE MIR -2 206 113 4404 67 0 21 chr17 11204194 11204760 -74233720 - MER41A LTR ERV1 0 554 1 317 246 0 0 chr17 11205573 11205634 -74232846 + L2 LINE L2 3193 3253 -19 336 24 0 0 chr17 11205634 11205675 -74232805 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 2704 215 21 66 chr17 11205779 11206487 -74231993 - LTR8 LTR ERV1 0 691 16 292 287 73 22 chr17 11206629 11206765 -74231715 + MIR3 SINE MIR 49 191 -17 265 294 28 0 chr17 11207295 11207404 -74231076 - MER103 DNA DNA -47 119 8 257 253 22 22 chr17 11208443 11208534 -74229946 - L1ME4a LINE L1 -67 6054 5964 297 291 73 24 chr17 11209399 11209564 -74228916 - L1ME4a LINE L1 -71 6050 5878 263 130 0 19 chr17 11209557 11209611 -74228869 - L1ME4a LINE L1 -2 6119 6067 * 287 248 126 29 chr17 11209697 11209903 -74228577 - L1ME4a LINE L1 -2 6119 5894 2221 125 0 6 chr17 11210117 11210429 -74228051 - AluSg SINE Alu 0 310 1 843 153 45 86 chr17 11210797 11211019 -74227461 - L1MA10 LINE L1 -2 6332 6120 2351 55 3 45 chr17 11211020 11211329 -74227151 - AluY SINE Alu -15 296 1 1167 60 0 0 chr17 11211329 11211463 -74227017 - AluSg SINE Alu -176 134 1 2704 164 17 29 chr17 11211463 11211764 -74226716 - L1MB1 LINE L1 -38 6130 5827 2416 86 0 0 chr17 11211764 11212055 -74226425 - AluSc SINE Alu -17 292 2 2704 164 17 29 chr17 11212055 11212244 -74226236 - L1MB1 LINE L1 -341 5827 5643 2044 119 3 7 chr17 11212244 11212564 -74225916 + AluSq SINE Alu 1 319 0 2704 164 17 29 chr17 11212564 11212589 -74225891 - L1MB1 LINE L1 -525 5643 5619 334 217 88 35 chr17 11212603 11212779 -74225701 - L1MB1 LINE L1 -721 5445 5255 2062 103 14 17 chr17 11213207 11213499 -74224981 - AluSx SINE Alu 0 312 22 2532 52 3 7 chr17 11213734 11214041 -74224439 + AluY SINE Alu 1 306 -5 2452 228 72 15 chr17 11214277 11214568 -74223912 - L1ME3A LINE L1 -2 6160 5887 2362 54 7 0 chr17 11214568 11214870 -74223610 - AluY SINE Alu 0 304 1 2452 228 72 15 chr17 11214870 11215337 -74223143 - L1ME3A LINE L1 -275 5887 5324 199 308 47 83 chr17 11215373 11215542 -74222938 - MIR SINE MIR -45 217 55 182 318 0 30 chr17 11215603 11215669 -74222811 - L2 LINE L2 -21 3251 3188 605 303 34 0 chr17 11215848 11216056 -74222424 + MIR SINE MIR 31 245 -17 714 285 55 40 chr17 11216676 11217079 -74221401 - MER113 DNA MER1_type? -43 478 70 332 330 131 5 chr17 11217216 11217422 -74221058 + MIR SINE MIR 19 250 -12 547 134 10 62 chr17 11217627 11217724 -74220756 - FRAM SINE Alu -62 114 23 548 144 0 0 chr17 11217900 11217990 -74220490 - AluSp/q SINE Alu -1 312 223 1254 54 6 18 chr17 11219514 11219681 -74218799 - L1PA5 LINE L1 -2 6152 5988 1250 76 0 0 chr17 11219682 11219840 -74218640 + L1PA6 LINE L1 5742 5899 -255 2313 84 0 7 chr17 11219979 11220297 -74218183 + AluY SINE Alu 3 311 0 715 267 20 0 chr17 11220369 11220564 -74217916 + MIR SINE MIR 64 262 0 508 283 26 125 chr17 11221460 11221497 -74216983 - L2 LINE L2 0 3313 3274 1467 176 68 102 chr17 11221497 11221890 -74216590 + MSTC LTR MaLR 1 379 -49 2368 66 0 23 chr17 11221890 11222194 -74216286 + AluY SINE Alu 1 297 -14 1467 176 68 102 chr17 11222194 11222243 -74216237 + MSTC LTR MaLR 379 428 0 508 283 26 125 chr17 11222243 11222808 -74215672 - L2 LINE L2 -39 3274 2760 209 321 112 98 chr17 11222850 11223074 -74215406 + L2 LINE L2 2971 3201 -71 2279 112 0 0 chr17 11223074 11223370 -74215110 - AluSx SINE Alu -16 296 1 209 321 112 98 chr17 11223370 11223441 -74215039 + L2 LINE L2 3201 3270 -2 317 320 20 0 chr17 11223985 11224085 -74214395 - L2 LINE L2 -14 3299 3198 226 343 29 29 chr17 11224270 11224407 -74214073 + MIR SINE MIR 16 152 -56 4076 79 2 2 chr17 11226189 11226718 -74211762 + MER41A LTR ERV1 1 529 -25 374 344 47 27 chr17 11227258 11227514 -74210966 - MIR SINE MIR 0 262 2 2338 77 0 0 chr17 11228107 11228394 -74210086 - AluY SINE Alu -1 310 24 1211 224 0 73 chr17 11229216 11229481 -74208999 - L1ME2 LINE L1 -260 5904 5666 2258 101 3 0 chr17 11229481 11229777 -74208703 - AluSc SINE Alu -12 297 1 1211 224 0 73 chr17 11229777 11229841 -74208639 - L1ME2 LINE L1 -498 5666 5599 277 200 12 50 chr17 11229842 11229922 -74208558 + LTR67 LTR ERVL 481 557 0 236 309 15 0 chr17 11229951 11230019 -74208461 - L2 LINE L2 -17 3255 3187 334 305 107 19 chr17 11230258 11230520 -74207960 + L1ME4a LINE L1 5766 6050 -71 2164 84 6 40 chr17 11230525 11230847 -74207633 - AluY SINE Alu 0 311 1 2531 58 0 3 chr17 11230956 11231268 -74207212 - AluY SINE Alu 0 311 1 2157 229 96 10 chr17 11231659 11232252 -74206228 - LTR48B LTR ERV1 0 644 1 1272 85 0 0 chr17 11233594 11233758 -74204722 + AluY SINE Alu 132 295 -16 625 287 45 0 chr17 11234223 11234425 -74204055 + MIR SINE MIR 46 256 -6 198 71 0 0 chr17 11234532 11234560 -74203920 + (T)n Simple_repeat Simple_repeat 1 28 0 12557 97 7 2 chr17 11234867 11237348 -74201132 - L1PA8 LINE L1 -2 6485 4009 540 0 0 0 chr17 11237348 11237408 -74201072 + (TA)n Simple_repeat Simple_repeat 2 61 0 12557 97 7 2 chr17 11237408 11237427 -74201053 - L1PA8 LINE L1 -2478 4009 3992 12722 146 9 25 chr17 11237427 11240084 -74198396 - L1PA8 LINE L1 -3301 3160 521 616 128 0 0 chr17 11240072 11240158 -74198322 - L1PA8 LINE L1 -6365 96 11 * 3721 141 26 38 chr17 11240224 11240886 -74197594 - L1MC1 LINE L1 -2 6331 5678 369 197 162 17 chr17 11240891 11241008 -74197472 + MIR3 SINE MIR 4 137 -71 826 118 15 7 chr17 11241062 11241197 -74197283 - MSTA-int LTR MaLR -1515 136 1 2302 161 51 5 chr17 11241197 11241493 -74196987 - MSTA LTR MaLR 0 428 108 4320 109 11 88 chr17 11241493 11242190 -74196290 - LTR9B LTR ERV1 0 644 1 2302 161 51 5 chr17 11242190 11242285 -74196195 - MSTA LTR MaLR -320 108 19 1458 252 26 26 chr17 11242418 11242842 -74195638 - L1ME3A LINE L1 -219 6020 5597 864 248 37 17 chr17 11242887 11243294 -74195186 - L1ME3A LINE L1 -628 5605 5191 180 111 0 0 chr17 11243337 11243364 -74195116 + (GA)n Simple_repeat Simple_repeat 1 27 0 1653 188 3 7 chr17 11243377 11243680 -74194800 + AluJb SINE Alu 3 304 -8 898 207 131 125 chr17 11243681 11243912 -74194568 - L1MEc LINE L1 -3578 2637 2409 2179 157 64 43 chr17 11243912 11244151 -74194329 - MSTB1 LTR MaLR 0 432 179 2268 117 0 0 chr17 11244151 11244459 -74194021 + AluSg SINE Alu 1 308 -2 2179 157 64 43 chr17 11244459 11244639 -74193841 - MSTB1 LTR MaLR -253 179 4 898 207 131 125 chr17 11244639 11244928 -74193552 - L1MEc LINE L1 -3806 2409 2149 24 0 0 0 chr17 11245125 11245149 -74193331 + AT_rich Low_complexity Low_complexity 1 24 0 1268 144 0 42 chr17 11245176 11245391 -74193089 + Tigger2a DNA MER2_type 1 206 -228 2457 91 0 0 chr17 11245453 11245762 -74192718 - AluY SINE Alu -2 309 1 1543 201 81 0 chr17 11245771 11246055 -74192425 - 7SLRNA srpRNA srpRNA -13 307 1 1585 161 0 0 chr17 11246055 11246297 -74192183 + Tigger2a DNA MER2_type 193 434 0 337 308 81 29 chr17 11246311 11246629 -74191851 - L1M2 LINE L1 -4304 1912 1512 585 288 70 41 chr17 11246639 11246865 -74191615 + MLT1I LTR MaLR 12 244 -165 329 244 30 92 chr17 11246865 11247029 -74191451 - LTR16B LTR ERVL 0 464 311 2306 97 0 10 chr17 11247099 11247398 -74191082 + AluSc SINE Alu 5 300 -9 2045 138 0 6 chr17 11247708 11248019 -74190461 - AluSx SINE Alu -3 309 1 325 303 53 5 chr17 11248290 11248478 -74190002 - L1MEd LINE L1 -5028 1091 895 2181 117 7 0 chr17 11248868 11249166 -74189314 + AluSq SINE Alu 1 300 -13 196 170 38 0 chr17 11249444 11249497 -74188983 + (TA)n Simple_repeat Simple_repeat 1 55 0 201 39 0 0 chr17 11249812 11249838 -74188642 + (TG)n Simple_repeat Simple_repeat 2 27 0 358 264 21 42 chr17 11249854 11249998 -74188482 - LTR67 LTR ERVL -10 547 407 874 249 57 10 chr17 11251389 11251598 -74186882 + MER20 DNA MER1_type 1 219 0 182 309 15 29 chr17 11251623 11251691 -74186789 - L2 LINE L2 -6 3307 3241 4038 144 53 40 chr17 11251942 11252620 -74185860 + LTR12 LTR ERV1 1 687 -1 1457 137 18 0 chr17 11252624 11252850 -74185630 + LTR12 LTR ERV1 485 714 0 201 260 0 55 chr17 11253244 11253317 -74185163 - L2 LINE L2 -207 3065 2997 2310 82 3 3 chr17 11254823 11255128 -74183352 - AluSq SINE Alu -8 305 1 22 0 0 0 chr17 11255133 11255155 -74183325 + AT_rich Low_complexity Low_complexity 1 22 0 1724 160 22 116 chr17 11256358 11256771 -74181709 + MLT1A2 LTR MaLR 1 374 0 1823 218 34 22 chr17 11256813 11257226 -74181254 - LTR52 LTR ERVL -3 418 1 792 282 61 43 chr17 11257292 11257735 -74180745 - LTR16B LTR ERVL -11 453 3 851 281 34 43 chr17 11257765 11258114 -74180366 + MARNA DNA Mariner 141 486 -100 518 238 0 0 chr17 11258245 11258350 -74180130 + MER69A DNA AcHobo 60 164 -13 288 271 131 25 chr17 11259019 11259141 -74179339 + MIR3 SINE MIR 40 174 -34 1041 193 33 20 chr17 11259315 11259559 -74178921 + L1MCa LINE L1 12 258 -6168 2190 178 67 13 chr17 11259560 11260026 -74178454 + L1MCa LINE L1 778 1268 -5158 309 102 20 0 chr17 11260754 11260803 -74177677 + MADE1 DNA Mariner 31 80 0 421 362 30 25 chr17 11260816 11261015 -74177465 + L2 LINE L2 2870 3069 -203 217 254 0 0 chr17 11261268 11261323 -74177157 + A-rich Low_complexity Low_complexity 1 55 0 2326 112 0 0 chr17 11261490 11261794 -74176686 + AluSx SINE Alu 3 306 -6 1743 204 20 14 chr17 11261854 11262211 -74176269 + MLT1A2 LTR MaLR 16 374 0 236 302 135 32 chr17 11262233 11262485 -74175995 - HAL1 LINE L1 -83 2424 2147 302 317 90 18 chr17 11262545 11262628 -74175852 - MLT1J LTR MaLR -106 405 329 315 71 0 0 chr17 11262628 11262670 -74175810 + (TG)n Simple_repeat Simple_repeat 2 43 0 302 317 90 18 chr17 11262670 11262753 -74175727 - MLT1J LTR MaLR -182 329 227 1180 236 108 87 chr17 11262943 11263634 -74174846 - HAL1 LINE L1 -344 2163 1458 2347 177 135 9 chr17 11263660 11264111 -74174369 - MLT2B2 LTR ERVL 0 515 8 328 278 98 46 chr17 11264117 11264311 -74174169 - HAL1 LINE L1 -1067 1440 1237 870 248 87 63 chr17 11264315 11264808 -74173672 - HAL1 LINE L1 -1323 1184 680 465 305 71 66 chr17 11264874 11265281 -74173199 - HAL1 LINE L1 -1938 569 161 1959 190 32 0 chr17 11266826 11267174 -74171306 + MLT1A1 LTR MaLR 6 364 -1 643 217 64 35 chr17 11267346 11267549 -74170931 - MLT1J2 LTR MaLR -241 209 1 568 302 21 21 chr17 11267667 11267856 -74170624 - MER5A DNA MER1_type 0 189 1 535 204 47 29 chr17 11268079 11268251 -74170229 + MER104 DNA MER2_type 3 177 -3 2150 88 10 17 chr17 11269797 11270124 -74168356 - AluY SINE Alu 0 311 1 2347 97 0 0 chr17 11270381 11270690 -74167790 + AluSg SINE Alu 1 309 -1 198 143 0 0 chr17 11270697 11270732 -74167748 + (A)n Simple_repeat Simple_repeat 1 35 0 193 128 43 0 chr17 11271065 11271112 -74167368 + (TA)n Simple_repeat Simple_repeat 2 50 0 241 163 23 47 chr17 11271141 11271201 -74167279 + (TA)n Simple_repeat Simple_repeat 2 82 0 23 0 0 0 chr17 11271201 11271224 -74167256 + AT_rich Low_complexity Low_complexity 1 23 0 5360 146 30 42 chr17 11271271 11271838 -74166642 + L1MA4 LINE L1 5254 5826 -474 1766 90 0 9 chr17 11271838 11272071 -74166409 + AluSc SINE Alu 79 309 0 5360 146 30 42 chr17 11272071 11272424 -74166056 + L1MA4 LINE L1 5826 6163 -137 540 98 0 24 chr17 11272424 11272506 -74165974 + MADE1 DNA Mariner 1 80 0 5360 146 30 42 chr17 11272506 11272640 -74165840 + L1MA4 LINE L1 6163 6297 -3 2074 141 144 5 chr17 11272804 11273179 -74165301 + MSTA LTR MaLR 2 428 0 3610 211 54 6 chr17 11273326 11274549 -74163931 - L1MB7 LINE L1 -9 6175 4896 3949 144 13 49 chr17 11274554 11274790 -74163690 - L1MB3 LINE L1 -3 6180 5937 1901 170 18 42 chr17 11274790 11275190 -74163290 + MLT1B LTR MaLR 1 390 0 3949 144 13 49 chr17 11275190 11275363 -74163117 - L1MB3 LINE L1 -246 5937 5759 4066 190 38 49 chr17 11275363 11276233 -74162247 + MER21B LTR ERV1 3 862 -1 3949 144 13 49 chr17 11276233 11276580 -74161900 - L1MB3 LINE L1 -424 5759 5450 222 37 0 0 chr17 11276593 11276620 -74161860 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 1225 73 17 0 chr17 11276632 11276809 -74161671 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2017 146 3 7 chr17 11276835 11277137 -74161343 - AluJb SINE Alu -11 301 1 1011 306 135 34 chr17 11277153 11277360 -74161120 + L2 LINE L2 1984 2169 -1144 2330 58 0 64 chr17 11277360 11277672 -74160808 - AluY SINE Alu -15 296 5 1011 306 135 34 chr17 11277672 11278641 -74159839 + L2 LINE L2 2169 3264 -49 1998 140 3 0 chr17 11278694 11278980 -74159500 + AluSx SINE Alu 1 287 -25 188 35 35 0 chr17 11279629 11279658 -74158822 + (TG)n Simple_repeat Simple_repeat 2 31 0 295 343 53 34 chr17 11279729 11279994 -74158486 - L2 LINE L2 -525 2789 2520 805 302 106 22 chr17 11280707 11281158 -74157322 + LTR33 LTR ERVL 25 513 -8 2600 138 10 0 chr17 11281746 11282145 -74156335 + MER57A LTR ERV1 1 403 0 452 165 11 0 chr17 11282815 11282906 -74155574 + (TA)n Simple_repeat Simple_repeat 2 93 0 2019 119 0 41 chr17 11282927 11283125 -74155355 - AluSx SINE Alu 0 323 141 2246 112 3 0 chr17 11283125 11283420 -74155060 - AluSx SINE Alu -16 296 1 2019 119 0 41 chr17 11283420 11283556 -74154924 - AluSx SINE Alu -182 141 1 26 0 0 0 chr17 11283730 11283756 -74154724 + AT_rich Low_complexity Low_complexity 1 26 0 2482 71 3 3 chr17 11284011 11284322 -74154158 - AluY SINE Alu 0 311 1 4750 157 8 22 chr17 11284323 11285128 -74153352 - MER54B LTR ERVL 0 793 1 716 301 66 38 chr17 11285222 11285541 -74152939 - MLT1J2 LTR MaLR -3 447 120 2194 105 10 3 chr17 11285542 11285837 -74152643 + AluSq SINE Alu 1 297 -16 1759 163 4 7 chr17 11286333 11286610 -74151870 - AluJo SINE Alu -32 280 5 1713 194 0 3 chr17 11286639 11286922 -74151558 + AluJo SINE Alu 1 282 -30 305 313 114 0 chr17 11287096 11287227 -74151253 + L2 LINE L2 2622 2767 -547 2431 68 7 0 chr17 11287250 11287543 -74150937 - AluSc SINE Alu -14 295 1 268 304 27 93 chr17 11287730 11287987 -74150493 + L2 LINE L2 2918 3157 -115 912 222 129 73 chr17 11288022 11288463 -74150017 - LTR50 LTR ERVL 0 795 330 2231 47 4 25 chr17 11288503 11288779 -74149701 + AluY SINE Alu 32 301 -10 277 247 353 0 chr17 11288780 11288930 -74149550 - LTR50 LTR ERVL -581 214 12 2419 93 0 0 chr17 11289019 11289357 -74149123 + AluSg SINE Alu 1 338 0 1640 166 0 42 chr17 11290471 11290807 -74147673 + AluJb SINE Alu 11 333 0 2387 73 0 0 chr17 11291067 11291354 -74147126 + AluY SINE Alu 1 287 -24 431 302 54 15 chr17 11291510 11291715 -74146765 + HAL1b LINE L1 293 505 -843 348 167 0 0 chr17 11291900 11291954 -74146526 - MLT1A1 LTR MaLR 0 365 312 32 33 0 33 chr17 11291954 11291979 -74146501 + AT_rich Low_complexity Low_complexity 1 25 -34 2305 127 0 0 chr17 11291979 11292287 -74146193 - AluSg SINE Alu -2 308 1 32 33 0 33 chr17 11292287 11292322 -74146158 + AT_rich Low_complexity Low_complexity 25 59 0 3010 69 13 2 chr17 11292325 11292718 -74145762 - L1PA8 LINE L1 -10 6162 5766 1341 205 94 7 chr17 11292720 11293018 -74145462 - MLT1A1 LTR MaLR -41 324 1 242 274 10 10 chr17 11293073 11293148 -74145332 + (TAA)n Simple_repeat Simple_repeat 3 80 -24 1956 88 3 100 chr17 11293148 11293467 -74145013 + AluSx SINE Alu 1 288 -24 242 274 10 10 chr17 11293467 11293493 -74144987 + (TAA)n Simple_repeat Simple_repeat 79 104 0 2582 49 3 3 chr17 11293670 11293978 -74144502 - AluY SINE Alu -3 308 1 409 240 182 0 chr17 11294098 11294252 -74144228 - MER5A DNA MER1_type -1 188 7 450 271 8 42 chr17 11296161 11296279 -74142201 + MER81 DNA DNA 1 114 0 1448 196 50 0 chr17 11296821 11297102 -74141378 - AluJo SINE Alu -2 310 16 21 0 0 0 chr17 11297885 11297906 -74140574 + AT_rich Low_complexity Low_complexity 1 21 0 256 217 98 22 chr17 11297911 11298003 -74140477 + L1MC4 LINE L1 7928 8026 -16 21 0 0 0 chr17 11298014 11298035 -74140445 + AT_rich Low_complexity Low_complexity 1 21 0 381 266 56 14 chr17 11298694 11298837 -74139643 - MLT1L LTR MaLR -2 613 465 808 22 0 0 chr17 11298837 11298929 -74139551 - L1PA4 LINE L1 -215 5940 5849 1406 18 18 0 chr17 11298929 11299097 -74139383 + L1PA4 LINE L1 5985 6155 0 330 303 174 0 chr17 11299103 11299235 -74139245 - MLT1L LTR MaLR -150 465 311 478 228 0 0 chr17 11299985 11300077 -74138403 + MLT2F LTR ERVL 17 108 -555 2905 140 18 8 chr17 11300160 11300667 -74137813 - L1MA7 LINE L1 -7 6284 5773 196 283 19 0 chr17 11300686 11300739 -74137741 - L2 LINE L2 0 3272 3219 2508 69 3 3 chr17 11300810 11301114 -74137366 - AluSg SINE Alu -6 304 1 1321 240 96 22 chr17 11301160 11301713 -74136767 - MLT2F LTR ERVL 0 663 1 234 247 0 104 chr17 11301837 11301914 -74136566 - MIR SINE MIR -3 259 191 * 636 276 168 14 chr17 11301904 11302300 -74136180 + L2 LINE L2 2616 2950 -363 225 94 0 0 chr17 11302300 11302332 -74136148 + (CA)n Simple_repeat Simple_repeat 2 33 0 636 276 168 14 chr17 11302332 11302543 -74135937 + L2 LINE L2 2950 3311 -2 326 303 27 24 chr17 11302553 11302710 -74135770 - MIR SINE MIR -58 150 33 1805 77 20 156 chr17 11302803 11303155 -74135325 + AluYb8 SINE Alu 5 308 -10 231 278 62 0 chr17 11303591 11303688 -74134792 + L1ME LINE L1 5809 5911 -210 319 196 54 62 chr17 11303877 11303989 -74134491 - L1MC5 LINE L1 -78 7883 7773 858 228 147 45 chr17 11303993 11304305 -74134175 - L1ME2 LINE L1 -15 6149 5806 * 1090 275 104 21 chr17 11304290 11304858 -74133622 - L1M4 LINE L1 -2535 3611 2997 647 349 121 32 chr17 11304861 11305039 -74133441 - L2 LINE L2 -1675 1639 1478 2589 68 0 0 chr17 11305039 11305346 -74133134 + AluY SINE Alu 1 307 -4 647 349 121 32 chr17 11305346 11306442 -74132038 - L2 LINE L2 -1836 1478 252 1723 212 88 51 chr17 11306594 11307006 -74131474 - MLT1D LTR MaLR -1 504 70 2093 107 3 13 chr17 11307006 11307305 -74131175 + AluSg SINE Alu 1 296 -14 1723 212 88 51 chr17 11307305 11307378 -74131102 - MLT1D LTR MaLR -435 70 1 577 251 56 17 chr17 11307572 11307751 -74130729 - MER5A DNA MER1_type 0 189 4 525 228 170 6 chr17 11307841 11308012 -74130468 + MIR SINE MIR 14 212 -50 2271 97 0 3 chr17 11308047 11308336 -74130144 - AluSx SINE Alu -24 288 1 395 141 0 0 chr17 11308400 11308464 -74130016 - LTR33A LTR ERVL -46 477 414 2335 91 3 3 chr17 11309788 11310086 -74128394 - AluSq SINE Alu -15 298 1 212 275 28 92 chr17 11310450 11310499 -74127981 - MER5A DNA MER1_type -68 121 80 2079 119 0 3 chr17 11310499 11310804 -74127676 - AluY SINE Alu 0 304 1 212 275 28 92 chr17 11310804 11310862 -74127618 - MER5A DNA MER1_type -109 80 20 1064 62 0 0 chr17 11311031 11311159 -74127321 + AluSg/x SINE Alu 178 305 -7 597 212 8 0 chr17 11311218 11311336 -74127144 + FLAM_A SINE Alu 2 120 -13 541 244 83 65 chr17 11311569 11311786 -74126694 + MIR SINE MIR 20 240 -22 22 0 0 0 chr17 11312882 11312904 -74125576 + AT_rich Low_complexity Low_complexity 1 22 0 2485 53 0 0 chr17 11312912 11313221 -74125259 + AluY SINE Alu 1 309 0 1647 219 64 26 chr17 11313467 11313919 -74124561 - LTR55 LTR ERV 0 548 80 216 0 0 0 chr17 11313958 11313982 -74124498 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2343 66 0 7 chr17 11313985 11314273 -74124207 - AluY SINE Alu -23 288 3 213 311 113 9 chr17 11314307 11314413 -74124067 + MIR SINE MIR 72 188 -74 1094 157 65 55 chr17 11315050 11315267 -74123213 - MER20 DNA MER1_type 0 219 1 2488 154 51 10 chr17 11315330 11315740 -74122740 + MSTA LTR MaLR 2 428 0 296 249 11 133 chr17 11317370 11317551 -74120929 + MLT1J LTR MaLR 6 164 -347 388 311 84 59 chr17 11317728 11317915 -74120565 + LTR16C LTR ERVL 94 292 -199 1752 141 198 41 chr17 11317915 11318284 -74120196 - MSTA LTR MaLR 0 428 2 388 311 84 59 chr17 11318284 11318382 -74120098 + LTR16C LTR ERVL 292 386 -105 190 229 0 21 chr17 11319186 11319234 -74119246 + MIR SINE MIR 210 256 -6 2130 261 7 22 chr17 11319379 11319922 -74118558 + MLT1F LTR MaLR 8 542 0 335 263 13 77 chr17 11319954 11320110 -74118370 + MIR SINE MIR 117 262 0 932 213 0 0 chr17 11321030 11321194 -74117286 + FRAM SINE Alu 1 159 -17 230 270 11 34 chr17 11321681 11321770 -74116710 + MIR SINE MIR 32 118 -90 180 278 165 0 chr17 11321867 11321982 -74116498 - MIR SINE MIR -18 244 111 1252 51 6 0 chr17 11322049 11322207 -74116273 - L1P LINE L1 -1050 5096 4938 2608 42 0 0 chr17 11322207 11322511 -74115969 + L1PA4 LINE L1 5845 6152 -3 206 283 257 0 chr17 11322628 11322741 -74115739 + L2 LINE L2 3116 3257 -15 270 136 0 0 chr17 11322997 11323041 -74115439 + (TA)n Simple_repeat Simple_repeat 1 44 0 228 270 0 40 chr17 11323050 11323150 -74115330 - L1MC4 LINE L1 -1339 6703 6608 479 239 83 22 chr17 11323178 11323358 -74115122 - L1MC4 LINE L1 -1896 5912 5722 956 214 0 5 chr17 11323615 11323802 -74114678 + MLT2C1 LTR ERVL 1 186 -211 547 285 77 72 chr17 11323803 11323841 -74114639 - HAL1 LINE L1 -766 1741 1705 1646 207 24 0 chr17 11323841 11324175 -74114305 - MER2 DNA MER2_type -1 343 2 547 285 77 72 chr17 11324175 11324993 -74113487 - HAL1 LINE L1 -802 1705 881 397 293 193 36 chr17 11325343 11325732 -74112748 - L1MC4 LINE L1 -1822 4324 3875 1981 179 53 16 chr17 11325738 11326112 -74112368 - MLT1C LTR MaLR 0 467 80 227 275 84 15 chr17 11326252 11326383 -74112097 - L1MC4 LINE L1 -2345 3801 3662 1179 103 0 6 chr17 11326391 11326566 -74111914 - AluSg/x SINE Alu -17 295 122 1235 120 0 6 chr17 11326566 11326741 -74111739 - AluSx SINE Alu -138 174 1 564 114 0 0 chr17 11326741 11326820 -74111660 + MER72 LTR ERV1 644 722 0 1120 166 106 119 chr17 11327027 11327233 -74111247 + MLT1A2 LTR MaLR 1 201 -173 1982 96 51 17 chr17 11327233 11327526 -74110954 + AluSc SINE Alu 1 303 -6 1120 166 106 119 chr17 11327526 11327698 -74110782 + MLT1A2 LTR MaLR 201 374 0 257 287 163 16 chr17 11328276 11328405 -74110075 + MIR3 SINE MIR 47 194 -14 257 286 19 57 chr17 11328905 11329010 -74109470 - MIR SINE MIR -50 212 112 1597 156 71 7 chr17 11329341 11329624 -74108856 + AluJb SINE Alu 1 301 -11 22 0 0 0 chr17 11331294 11331316 -74107164 + AT_rich Low_complexity Low_complexity 1 22 0 548 256 6 52 chr17 11331968 11332140 -74106340 + MER117 DNA MER1_type 8 171 -26 1669 177 30 74 chr17 11333443 11333849 -74104631 + MLT1B LTR MaLR 3 390 0 855 225 109 101 chr17 11333984 11334450 -74104030 - MLT1H LTR MaLR 0 549 80 374 296 57 23 chr17 11335388 11335564 -74102916 - MLT1K LTR MaLR 0 588 407 214 298 298 46 chr17 11335946 11336164 -74102316 + L3 LINE CR1 712 984 -593 275 352 47 16 chr17 11336164 11336292 -74102188 + L3 LINE CR1 1377 1508 -69 201 74 0 0 chr17 11336304 11336331 -74102149 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 729 275 129 39 chr17 11336376 11336685 -74101795 - LTR16A LTR ERVL -24 426 90 748 311 127 38 chr17 11336705 11337130 -74101350 - L2 LINE L2 -44 3269 2807 211 309 41 41 chr17 11337230 11337327 -74101153 - MIR SINE MIR -63 145 49 415 317 98 6 chr17 11337342 11337520 -74100960 - MLT1L LTR MaLR 0 615 421 314 200 71 0 chr17 11337520 11337590 -74100890 - MLT1I LTR MaLR 0 409 335 193 105 0 70 chr17 11337593 11337650 -74100830 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 223 193 35 0 chr17 11337652 11337709 -74100771 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 776 289 37 55 chr17 11337711 11338036 -74100444 - MLT1I LTR MaLR -85 324 6 2089 126 0 0 chr17 11338045 11338346 -74100134 + AluSx SINE Alu 1 301 -11 1110 66 11 22 chr17 11338438 11338620 -74099860 + (GAA)n Simple_repeat Simple_repeat 1 180 0 207 345 0 0 chr17 11339054 11339112 -74099368 + L3b LINE CR1 1522 1579 -4 181 354 98 12 chr17 11339407 11339571 -74098909 + L2 LINE L2 2218 2395 -919 313 295 140 83 chr17 11339576 11340231 -74098249 + L2 LINE L2 2565 3268 -4 291 104 0 0 chr17 11341622 11341670 -74096810 + (CCG)n Simple_repeat Simple_repeat 1 48 0 22 80 0 0 chr17 11341764 11341814 -74096666 + GC_rich Low_complexity Low_complexity 1 50 0 225 0 0 0 chr17 11342050 11342075 -74096405 + (CCG)n Simple_repeat Simple_repeat 2 26 0 201 203 29 29 chr17 11342240 11342309 -74096171 + (CCG)n Simple_repeat Simple_repeat 3 71 0 29 98 0 0 chr17 11342321 11342413 -74096067 + GC_rich Low_complexity Low_complexity 1 92 0 23 68 0 0 chr17 11342538 11342582 -74095898 + GC_rich Low_complexity Low_complexity 1 44 0 23 78 0 0 chr17 11342627 11342678 -74095802 + GC_rich Low_complexity Low_complexity 1 51 0 2135 109 0 0 chr17 11347200 11347503 -74090977 + AluY SINE Alu 2 304 -7 2076 119 0 0 chr17 11348762 11349064 -74089416 - AluY SINE Alu -9 302 1 319 326 16 8 chr17 11349320 11349449 -74089031 - MIR3 SINE MIR -46 162 33 2538 40 3 0 chr17 11349848 11350150 -74088330 + AluY SINE Alu 1 303 -8 366 143 0 0 chr17 11350274 11350337 -74088143 + (TG)n Simple_repeat Simple_repeat 1 63 0 738 290 131 24 chr17 11350583 11350966 -74087514 - MARNA DNA Mariner -85 501 78 539 198 108 25 chr17 11351914 11352071 -74086409 - MIR SINE MIR -18 244 75 242 271 0 0 chr17 11355210 11355269 -74083211 + MIR SINE MIR 57 115 -147 354 330 153 40 chr17 11355487 11355866 -74082614 - L3 LINE CR1 -4 1573 1152 468 252 67 8 chr17 11356049 11356168 -74082312 + L2 LINE L2 3182 3307 -6 226 225 25 12 chr17 11356302 11356382 -74082098 + GA-rich Low_complexity Low_complexity 3 83 0 213 204 0 20 chr17 11356863 11356912 -74081568 - L2 LINE L2 0 3313 3266 * 601 268 50 88 chr17 11356879 11357140 -74081340 - MIR SINE MIR -10 252 2 2074 118 0 3 chr17 11357203 11357508 -74080972 + AluSx SINE Alu 1 304 -8 1837 173 0 0 chr17 11358369 11358681 -74079799 + AluJb SINE Alu 1 312 0 183 184 0 0 chr17 11358683 11358721 -74079759 + GA-rich Low_complexity Low_complexity 3 40 0 26 0 0 0 chr17 11358982 11359008 -74079472 + AT_rich Low_complexity Low_complexity 1 26 0 349 197 7 26 chr17 11359920 11360072 -74078408 + (TGGA)n Simple_repeat Simple_repeat 1 149 0 192 182 0 0 chr17 11360128 11360172 -74078308 + GA-rich Low_complexity Low_complexity 1 44 0 678 319 40 12 chr17 11360191 11360439 -74078041 + MIR SINE MIR 6 260 -2 264 330 0 28 chr17 11361462 11361644 -74076836 + CT-rich Low_complexity Low_complexity 4 180 0 372 296 13 13 chr17 11361719 11361878 -74076602 + CT-rich Low_complexity Low_complexity 1 159 0 2635 171 45 25 chr17 11362485 11363034 -74075446 - L1MB7 LINE L1 -196 5988 5429 733 179 7 26 chr17 11363031 11363182 -74075298 - L1MB7 LINE L1 -1113 5033 4886 * 221 299 15 0 chr17 11365091 11365158 -74073322 - MIR SINE MIR -110 152 85 734 260 80 10 chr17 11365200 11365400 -74073080 - MIR SINE MIR -4 258 45 472 230 69 46 chr17 11366076 11366250 -74072230 + MER5B DNA MER1_type 1 178 0 816 163 16 79 chr17 11366301 11366491 -74071989 - MER5B DNA MER1_type 0 178 1 421 273 20 0 chr17 11367302 11367401 -74071079 + MER5A DNA MER1_type 9 109 -80 447 319 65 11 chr17 11367472 11367657 -74070823 + MIR SINE MIR 47 241 -21 269 237 0 66 chr17 11367952 11368028 -74070452 - MIR SINE MIR 0 262 192 624 199 127 0 chr17 11368247 11368404 -74070076 + MER5A DNA MER1_type 4 183 -6 503 287 33 0 chr17 11368418 11368540 -74069940 - MER5B DNA MER1_type 0 178 53 698 325 137 35 chr17 11369343 11369804 -74068676 + L2 LINE L2 2804 3311 -2 2062 123 3 3 chr17 11370021 11370330 -74068150 - AluSc SINE Alu 0 309 1 245 276 0 0 chr17 11370869 11370927 -74067553 + MER3 DNA MER1_type 40 97 -112 2101 119 0 10 chr17 11370951 11371262 -74067218 - AluSg SINE Alu 0 310 3 1048 195 0 79 chr17 11371505 11371746 -74066734 - MER58A DNA MER1_type -1 223 2 200 231 0 62 chr17 11372025 11372090 -74066390 - L2 LINE L2 -1501 1813 1753 477 266 26 45 chr17 11372242 11372396 -74066084 + L3 LINE CR1 615 765 -812 2015 103 0 67 chr17 11372421 11372750 -74065730 - AluSq SINE Alu -6 307 1 422 226 83 22 chr17 11373414 11373587 -74064893 + MIR SINE MIR 1 187 -63 554 299 41 15 chr17 11374047 11374244 -74064236 - MIR SINE MIR -40 222 21 472 270 152 53 chr17 11376467 11376961 -74061519 - L2 LINE L2 -56 3257 2670 2182 130 0 7 chr17 11376961 11377268 -74061212 - AluSx SINE Alu -7 305 1 472 270 152 53 chr17 11377268 11377398 -74061082 - L2 LINE L2 -643 2670 2554 303 233 117 42 chr17 11377428 11377548 -74060932 - L1MC4 LINE L1 0 8042 7914 644 212 0 17 chr17 11377591 11377770 -74060710 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 474 301 0 6 chr17 11377770 11377926 -74060554 - L1MC4 LINE L1 -146 7896 7742 370 190 0 13 chr17 11377953 11378032 -74060448 - L2 LINE L2 -803 2511 2434 393 22 0 0 chr17 11378226 11378272 -74060208 + (TC)n Simple_repeat Simple_repeat 1 46 0 351 0 0 0 chr17 11378271 11378310 -74060170 + (CA)n Simple_repeat Simple_repeat 1 39 0 * 409 248 31 62 chr17 11378409 11378538 -74059942 + L2 LINE L2 3148 3272 0 1236 259 161 20 chr17 11378576 11379024 -74059456 - MLT1J LTR MaLR 0 511 1 180 357 63 28 chr17 11380237 11380380 -74058100 + MIR SINE MIR 84 231 -31 245 333 21 0 chr17 11380555 11380648 -74057832 - MIR SINE MIR -89 173 79 228 67 0 0 chr17 11380792 11380822 -74057658 + (GA)n Simple_repeat Simple_repeat 2 31 0 2707 247 81 19 chr17 11381947 11382822 -74055658 - L1M4 LINE L1 -1779 4367 3439 2455 56 7 0 chr17 11383392 11383696 -74054784 - L1PA6 LINE L1 -1 6153 5848 207 433 8 8 chr17 11384320 11384440 -74054040 - MIR3 SINE MIR -86 122 3 205 310 0 0 chr17 11385051 11385109 -74053371 + (CA)n Simple_repeat Simple_repeat 1 58 0 788 236 20 86 chr17 11385153 11385445 -74053035 - MLT1J LTR MaLR -2 509 237 271 231 0 62 chr17 11385502 11385567 -74052913 - MLT1L LTR MaLR -554 61 1 1772 112 0 12 chr17 11386828 11387078 -74051402 - AluSx SINE Alu -13 299 53 606 187 0 0 chr17 11388096 11388203 -74050277 + FRAM SINE Alu 1 99 -77 623 93 0 10 chr17 11388204 11388301 -74050179 + (GGAA)n Simple_repeat Simple_repeat 3 98 0 1497 184 52 4 chr17 11388394 11388661 -74049819 + AluJb SINE Alu 1 280 -32 282 198 0 57 chr17 11388665 11388771 -74049709 + GA-rich Low_complexity Low_complexity 4 103 0 907 178 32 95 chr17 11388877 11389215 -74049265 - L1MC5 LINE L1 -31 7930 7614 271 246 56 56 chr17 11389219 11389345 -74049135 - L1MC/D LINE L1 -1991 5817 5692 400 120 13 40 chr17 11389491 11389566 -74048914 + FAM SINE Alu 104 176 -3 288 321 50 27 chr17 11389661 11389965 -74048515 - L1MC/D LINE L1 -1825 4321 4013 367 270 76 53 chr17 11390093 11390449 -74048031 - L1MC/D LINE L1 -2173 3973 3610 258 116 0 0 chr17 11390550 11390593 -74047887 + (TA)n Simple_repeat Simple_repeat 1 43 0 24 53 0 0 chr17 11390895 11390933 -74047547 + AT_rich Low_complexity Low_complexity 1 38 0 2458 85 0 0 chr17 11391335 11391640 -74046840 - AluY SINE Alu -6 305 1 300 168 30 20 chr17 11391957 11392058 -74046422 + (TTAA)n Simple_repeat Simple_repeat 4 105 0 1480 158 19 68 chr17 11392286 11392354 -74046126 - MLT1B LTR MaLR 0 390 320 2183 88 0 4 chr17 11392354 11392652 -74045828 + AluSc SINE Alu 11 307 0 1480 158 19 68 chr17 11392652 11392893 -74045587 - MLT1B LTR MaLR -70 320 95 1190 141 157 0 chr17 11392902 11393144 -74045336 - L1MA8 LINE L1 -19 6272 5993 669 128 0 9 chr17 11393146 11393255 -74045225 - MLT1B LTR MaLR -257 133 26 584 140 0 0 chr17 11393255 11393348 -74045132 - L1PA8 LINE L1 -146 6026 5934 722 107 0 0 chr17 11393348 11393449 -74045031 + L1PA8 LINE L1 6059 6161 -11 23 0 0 0 chr17 11393449 11393472 -74045008 + AT_rich Low_complexity Low_complexity 1 23 0 267 315 110 46 chr17 11393507 11393815 -74044665 - L2 LINE L2 -268 3045 2714 2327 103 0 0 chr17 11393815 11394115 -74044365 - AluSp SINE Alu -13 300 1 267 315 110 46 chr17 11394115 11394159 -74044321 - L2 LINE L2 -599 2714 2674 218 250 48 65 chr17 11394732 11394856 -74043624 + MIR SINE MIR 141 262 0 2404 96 0 0 chr17 11394872 11395174 -74043306 - AluSc SINE Alu -7 302 1 476 140 11 65 chr17 11395637 11395730 -74042750 - Tigger7 DNA MER2_type 0 2487 2400 2745 181 50 6 chr17 11395733 11396231 -74042249 - Tigger7 DNA MER2_type -1965 522 3 1420 284 99 58 chr17 11396289 11396672 -74041808 - L2 LINE L2 0 3313 2947 2484 76 0 3 chr17 11396672 11396975 -74041505 + AluY SINE Alu 1 302 -9 1420 284 99 58 chr17 11396975 11398224 -74040256 - L2 LINE L2 -366 2947 1611 838 309 73 33 chr17 11398257 11398710 -74039770 - MLT1J LTR MaLR 0 511 41 250 325 48 48 chr17 11398780 11399008 -74039472 - L2 LINE L2 -1741 1573 1346 448 303 166 0 chr17 11399031 11399242 -74039238 - MIR SINE MIR -15 247 2 444 322 82 14 chr17 11399308 11399600 -74038880 - L2 LINE L2 -2050 1264 953 386 111 0 0 chr17 11399970 11400024 -74038456 - MADE1 DNA Mariner 0 80 27 487 260 17 46 chr17 11400230 11400403 -74038077 - MIR SINE MIR 0 262 95 2076 153 44 114 chr17 11400403 11400854 -74037626 - MLT1D LTR MaLR 0 505 97 2383 107 0 0 chr17 11400854 11401162 -74037318 + AluY SINE Alu 1 308 -3 2076 153 44 114 chr17 11401162 11401253 -74037227 - MLT1D LTR MaLR -408 97 1 418 303 49 27 chr17 11401322 11401507 -74036973 - MER117 DNA MER1_type -3 194 6 228 67 0 0 chr17 11401645 11401675 -74036805 + (T)n Simple_repeat Simple_repeat 1 30 0 2827 70 3 3 chr17 11402832 11403187 -74035293 - THE1A LTR MaLR 0 355 1 271 278 191 19 chr17 11403293 11403455 -74035025 - MIR3 SINE MIR -5 203 14 180 0 0 0 chr17 11404042 11404062 -74034418 + (CAGTG)n Simple_repeat Simple_repeat 1 20 0 301 263 6 0 chr17 11404175 11404358 -74034122 + (TG)n Simple_repeat Simple_repeat 1 184 0 460 288 0 0 chr17 11404372 11404542 -74033938 + (TG)n Simple_repeat Simple_repeat 1 170 0 216 340 33 33 chr17 11406093 11406246 -74032234 + MIR SINE MIR 71 223 -39 270 153 0 0 chr17 11408103 11408162 -74030318 + T-rich Low_complexity Low_complexity 1 59 0 554 270 108 45 chr17 11408336 11408669 -74029811 - MLT1J LTR MaLR -147 364 11 278 275 83 0 chr17 11408691 11408800 -74029680 - L2 LINE L2 -88 3225 3108 217 257 114 0 chr17 11408830 11408900 -74029580 - MIR3 SINE MIR -12 196 119 272 289 44 0 chr17 11409090 11409180 -74029300 - MIR3 SINE MIR -10 198 105 197 311 30 53 chr17 11409521 11409653 -74028827 - L3 LINE CR1 -1113 464 336 1805 147 18 18 chr17 11409965 11410251 -74028229 - AluJo SINE Alu -22 290 5 350 266 101 24 chr17 11410955 11411136 -74027344 - MLT1J LTR MaLR -235 199 20 278 350 23 23 chr17 11411184 11411398 -74027082 - L2 LINE L2 -12 3301 3088 685 278 65 4 chr17 11411435 11411683 -74026797 - L2 LINE L2 -365 2949 2687 2279 96 7 13 chr17 11411683 11411817 -74026663 + AluSg SINE Alu 1 134 -176 2493 78 3 0 chr17 11411817 11412123 -74026357 + AluY SINE Alu 1 307 -4 2279 96 7 13 chr17 11412123 11412291 -74026189 + AluSg SINE Alu 134 301 -9 2142 118 0 0 chr17 11412751 11413064 -74025416 - AluSg SINE Alu 0 313 1 27 62 0 0 chr17 11413257 11413305 -74025175 + AT_rich Low_complexity Low_complexity 1 48 0 487 163 1 0 chr17 11413941 11414035 -74024445 + MER63 DNA MER1_type 656 751 -85 253 313 68 12 chr17 11414127 11414290 -74024190 - L1ME LINE L1 -540 5564 5393 266 269 0 0 chr17 11414608 11414675 -74023805 - L2 LINE L2 -262 3051 2985 21 0 0 0 chr17 11415444 11415465 -74023015 + AT_rich Low_complexity Low_complexity 1 21 0 2322 104 0 13 chr17 11415513 11415830 -74022650 - AluSq SINE Alu 0 313 1 751 311 107 24 chr17 11415846 11416801 -74021679 - L1ME LINE L1 -1389 4740 3707 360 329 120 48 chr17 11417092 11417380 -74021100 - L1ME LINE L1 -2744 3385 3119 246 32 0 0 chr17 11417380 11417411 -74021069 + (TC)n Simple_repeat Simple_repeat 2 32 0 2288 104 0 3 chr17 11417411 11417710 -74020770 - AluSg SINE Alu -12 298 1 360 329 120 48 chr17 11417710 11418104 -74020376 - L1ME LINE L1 -3009 3120 2653 267 306 0 16 chr17 11418600 11418724 -74019756 + CT-rich Low_complexity Low_complexity 3 124 0 27 87 0 0 chr17 11418796 11418865 -74019615 + AT_rich Low_complexity Low_complexity 1 69 0 429 177 44 99 chr17 11418995 11419176 -74019304 - L1MC5 LINE L1 -179 7782 7612 365 343 14 42 chr17 11419631 11419774 -74018706 + L2 LINE L2 3134 3272 0 257 301 10 10 chr17 11419852 11419955 -74018525 - L1ME LINE L1 -4972 1147 1045 2374 82 0 0 chr17 11420065 11420356 -74018124 - AluSx SINE Alu -8 304 14 2219 113 7 0 chr17 11421368 11421660 -74016820 + AluSq SINE Alu 1 294 -19 189 0 0 0 chr17 11421660 11421681 -74016799 + (GA)n Simple_repeat Simple_repeat 2 22 0 270 254 30 15 chr17 11422263 11422330 -74016150 - MLT1J LTR MaLR -333 178 111 1309 265 48 69 chr17 11422455 11422753 -74015727 - L1MEc LINE L1 -3998 2398 2095 1639 91 36 0 chr17 11422753 11422974 -74015506 - MER30 DNA MER1_type 0 230 2 1309 265 48 69 chr17 11422974 11423468 -74015012 - L1MEc LINE L1 -4301 2095 1623 258 179 54 0 chr17 11423500 11423556 -74014924 - L1MC3 LINE L1 0 7785 7727 233 225 84 14 chr17 11424251 11424322 -74014158 - MIR3 SINE MIR -46 162 87 2389 64 7 0 chr17 11424363 11424691 -74013789 + AluSp SINE Alu 1 292 -21 242 204 0 0 chr17 11424856 11424910 -74013570 - L1MB8 LINE L1 0 6178 6125 268 297 25 25 chr17 11425358 11425476 -74013004 - L2 LINE L2 0 3272 3155 183 349 20 59 chr17 11425799 11425951 -74012529 - MIR3 SINE MIR -60 148 3 380 266 44 0 chr17 11426735 11426848 -74011632 + MIR3 SINE MIR 87 204 -4 2337 71 10 7 chr17 11426979 11427274 -74011206 + AluY SINE Alu 1 296 -15 315 333 0 10 chr17 11428299 11428401 -74010079 + MIR3 SINE MIR 67 167 -41 1847 119 0 0 chr17 11428534 11428826 -74009654 + AluSx SINE Alu 30 321 0 405 54 0 0 chr17 11428896 11428952 -74009528 + (TC)n Simple_repeat Simple_repeat 1 56 0 27 29 0 0 chr17 11428975 11429009 -74009471 + AT_rich Low_complexity Low_complexity 1 34 0 209 243 149 14 chr17 11429048 11429122 -74009358 + MIR SINE MIR 65 148 -114 196 365 72 12 chr17 11429159 11429326 -74009154 + MIR SINE MIR 3 179 -83 847 271 21 21 chr17 11429337 11429573 -74008907 + MIR SINE MIR 14 249 -13 294 262 103 68 chr17 11429651 11429914 -74008566 - L2 LINE L2 -78 3235 2964 233 146 21 0 chr17 11430881 11430929 -74007551 + CT-rich Low_complexity Low_complexity 2 50 0 721 258 88 46 chr17 11431022 11431282 -74007198 - MLT1K LTR MaLR -220 368 98 240 35 0 0 chr17 11431477 11431506 -74006974 + (GA)n Simple_repeat Simple_repeat 2 30 0 240 276 11 23 chr17 11432967 11433054 -74005426 + CT-rich Low_complexity Low_complexity 4 89 0 535 214 28 20 chr17 11434247 11434461 -74004019 + MER21B LTR ERV1 12 265 -598 186 43 0 0 chr17 11434478 11434501 -74003979 + (TTC)n Simple_repeat Simple_repeat 2 24 0 1907 95 0 0 chr17 11434503 11434744 -74003736 - AluSx SINE Alu -10 302 62 515 133 0 0 chr17 11434744 11434819 -74003661 + AluS SINE Alu 2 76 -237 1430 251 39 78 chr17 11434822 11435359 -74003121 + MER21B LTR ERV1 297 812 -51 375 315 22 7 chr17 11436699 11436848 -74001632 + MIR SINE MIR 21 168 -49 1894 116 27 48 chr17 11436905 11437225 -74001255 + AluSx SINE Alu 1 314 0 581 261 202 44 chr17 11438108 11438449 -74000031 - LTR16C LTR ERVL 0 491 97 2171 77 0 57 chr17 11439380 11439706 -73998774 - AluSc SINE Alu 0 309 1 229 228 89 50 chr17 11439828 11439929 -73998551 + L1ME4a LINE L1 5676 5780 -341 755 62 0 0 chr17 11440072 11440168 -73998312 + L1PA5 LINE L1 6059 6154 0 231 293 49 32 chr17 11440369 11440492 -73997988 + L1ME4a LINE L1 5997 6121 0 766 236 151 46 chr17 11441194 11441654 -73996826 - MLT1H LTR MaLR -7 548 7 269 271 101 96 chr17 11442254 11442319 -73996161 - MIR SINE MIR -62 200 137 2166 128 3 0 chr17 11442319 11442624 -73995856 - AluSx SINE Alu -6 306 1 269 271 101 96 chr17 11442624 11442746 -73995734 - MIR SINE MIR -125 137 12 259 224 26 13 chr17 11443889 11443965 -73994515 - MIR3 SINE MIR -5 203 127 501 269 70 21 chr17 11444337 11444523 -73993957 - LTR16C LTR ERVL 0 491 297 846 139 0 0 chr17 11444864 11444979 -73993501 - AluSq/x SINE Alu -198 115 1 4185 243 74 40 chr17 11444979 11445635 -73992845 - L1M4 LINE L1 -693 5491 4859 4134 143 7 21 chr17 11445635 11446341 -73992139 - L1MA5 LINE L1 -6 6294 5599 4185 243 74 40 chr17 11446341 11447392 -73991088 - L1M4 LINE L1 -1325 4859 3712 468 299 70 0 chr17 11448449 11448636 -73989844 - MIR SINE MIR -14 248 49 201 209 30 0 chr17 11449459 11449526 -73988954 + (TTAA)n Simple_repeat Simple_repeat 2 70 0 227 217 22 0 chr17 11449644 11449690 -73988790 + CT-rich Low_complexity Low_complexity 1 47 0 556 122 0 0 chr17 11451066 11451148 -73987332 - AluSg/x SINE Alu -96 214 133 2381 53 0 3 chr17 11451148 11451470 -73987010 - AluY SINE Alu 0 321 1 4077 65 2 0 chr17 11451802 11452312 -73986168 + L1PA8 LINE L1 5662 6172 0 309 365 28 62 chr17 11452460 11452750 -73985730 + L2 LINE L2 2992 3271 -1 2310 85 3 0 chr17 11454167 11454461 -73984019 + AluSg SINE Alu 1 295 -15 878 200 42 33 chr17 11454955 11455170 -73983310 - MER20 DNA MER1_type -2 217 1 438 294 150 7 chr17 11455184 11455337 -73983143 - MER5A DNA MER1_type -6 183 9 381 306 21 37 chr17 11456489 11456799 -73981681 - LTR33 LTR ERVL -147 374 13 1951 75 0 57 chr17 11457919 11458222 -73980258 + AluY SINE Alu 39 325 0 256 219 0 16 chr17 11458371 11458435 -73980045 - L1ME4a LINE L1 -5 6116 6054 981 233 68 35 chr17 11458524 11458893 -73979587 - L1ME4a LINE L1 -195 5926 5546 2674 154 10 30 chr17 11459013 11459354 -73979126 - L1MB2 LINE L1 -2 6169 5823 2418 75 0 3 chr17 11459354 11459649 -73978831 - AluY SINE Alu -17 294 1 1643 155 44 30 chr17 11459653 11459950 -73978530 - AluSx SINE Alu -11 301 1 2674 154 10 30 chr17 11459950 11460097 -73978383 - L1MB2 LINE L1 -351 5820 5686 5402 48 1 12 chr17 11460828 11461268 -73977212 + L1PA8 LINE L1 5514 5946 -226 2356 101 0 7 chr17 11461268 11461576 -73976904 + AluSg SINE Alu 1 306 -4 5402 48 1 12 chr17 11461576 11461801 -73976679 + L1PA8 LINE L1 5946 6172 0 384 293 80 56 chr17 11462022 11462309 -73976171 - L1ME4a LINE L1 -1312 4834 4541 31 58 0 0 chr17 11462333 11462385 -73976095 + AT_rich Low_complexity Low_complexity 1 52 0 288 231 0 0 chr17 11462719 11462784 -73975696 - L2 LINE L2 -1 3271 3207 1758 177 0 23 chr17 11463131 11463431 -73975049 - AluJo SINE Alu -19 293 1 217 304 47 58 chr17 11463545 11463736 -73974744 + MIR SINE MIR 20 208 -54 2562 170 18 7 chr17 11464654 11465101 -73973379 + MER66A LTR ERV1 27 478 0 1816 203 27 33 chr17 11465120 11465915 -73972565 - L1ME3 LINE L1 -24 6138 5427 282 359 16 31 chr17 11465915 11466107 -73972373 + MIR SINE MIR 20 208 -54 183 184 0 0 chr17 11466147 11466185 -73972295 + (TTA)n Simple_repeat Simple_repeat 1 38 0 2167 127 0 0 chr17 11466264 11466568 -73971912 - AluSx SINE Alu 0 304 1 21 57 0 0 chr17 11466568 11466603 -73971877 + AT_rich Low_complexity Low_complexity 1 35 0 539 328 64 39 chr17 11466757 11467151 -73971329 - L2 LINE L2 -130 3183 2770 1766 165 29 0 chr17 11467151 11467430 -73971050 - AluJb SINE Alu -25 287 1 539 328 64 39 chr17 11467430 11467747 -73970733 - L2 LINE L2 -543 2770 2462 498 192 116 111 chr17 11467836 11468034 -73970446 + MLT1C LTR MaLR 1 199 -191 348 310 209 17 chr17 11468042 11468577 -73969903 - L2 LINE L2 -1470 1844 1207 216 171 0 0 chr17 11469533 11469568 -73968912 + (TAG)n Simple_repeat Simple_repeat 1 35 0 2396 97 0 0 chr17 11469647 11469945 -73968535 - AluSg SINE Alu -12 298 1 274 301 192 19 chr17 11469960 11470116 -73968364 - MIR SINE MIR -73 189 7 200 305 127 0 chr17 11470198 11470324 -73968156 + MIR SINE MIR 35 168 -85 304 371 29 6 chr17 11470927 11471097 -73967383 + MIR3 SINE MIR 30 203 -5 223 308 70 35 chr17 11471676 11471819 -73966661 + MIR3 SINE MIR 22 169 -39 345 280 34 8 chr17 11472486 11472604 -73965876 - MIR SINE MIR -12 250 130 523 280 171 47 chr17 11472989 11473604 -73964876 - L1MC4a LINE L1 -1854 5954 5264 258 314 49 0 chr17 11474206 11474308 -73964172 - HAL1b LINE L1 -752 596 490 221 139 23 0 chr17 11474335 11474378 -73964102 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1237 267 54 45 chr17 11474643 11475269 -73963211 - L1ME3A LINE L1 -268 5902 5271 230 187 0 67 chr17 11475713 11475788 -73962692 + (TAG)n Simple_repeat Simple_repeat 2 71 0 201 311 33 0 chr17 11475861 11475922 -73962558 - MIR SINE MIR -94 168 106 317 332 56 32 chr17 11476088 11476338 -73962142 - HAL1 LINE L1 -1098 1409 1154 2180 96 10 29 chr17 11477302 11477614 -73960866 - AluSc SINE Alu -3 306 1 770 217 56 22 chr17 11477756 11477936 -73960544 + MER5A DNA MER1_type 2 187 -2 291 145 0 11 chr17 11478214 11478270 -73960210 - Alu SINE Alu -264 44 1 838 194 35 0 chr17 11478427 11478597 -73959883 + MER5A DNA MER1_type 7 182 -7 443 250 23 15 chr17 11478756 11478888 -73959592 + MER5B DNA MER1_type 1 133 -45 876 195 11 26 chr17 11478889 11479079 -73959401 - L1PA11 LINE L1 -12 6162 5976 268 304 36 36 chr17 11479193 11479331 -73959149 - L1ME4a LINE L1 -24 6097 5960 533 136 22 49 chr17 11480081 11480265 -73958215 + (TA)n Simple_repeat Simple_repeat 1 179 0 1690 215 127 25 chr17 11481614 11482103 -73956377 - MLT1F LTR MaLR -3 539 1 314 248 211 0 chr17 11482307 11482416 -73956064 - L2 LINE L2 -5 3267 3136 193 330 20 10 chr17 11482526 11482626 -73955854 - L2 LINE L2 -408 2905 2805 1777 167 3 24 chr17 11483081 11483369 -73955111 - AluJo SINE Alu -30 282 1 2378 110 0 3 chr17 11483919 11484228 -73954252 - AluSx SINE Alu -4 308 1 304 341 127 0 chr17 11484965 11484997 -73953483 - MIR SINE MIR -13 249 222 282 29 0 0 chr17 11484997 11485032 -73953448 + (CATA)n Simple_repeat Simple_repeat 3 37 0 304 341 127 0 chr17 11485032 11485219 -73953261 - MIR SINE MIR -40 222 2 195 186 0 0 chr17 11485815 11485858 -73952622 + GA-rich Low_complexity Low_complexity 2 44 0 615 248 182 48 chr17 11485932 11486434 -73952046 - L2 LINE L2 0 3313 2752 1056 245 103 142 chr17 11486468 11487123 -73951357 - L2 LINE L2 -914 2400 1721 2008 101 4 8 chr17 11487123 11487390 -73951090 + AluSp SINE Alu 40 305 -8 1056 245 103 142 chr17 11487390 11487530 -73950950 - L2 LINE L2 -1593 1721 1577 204 40 0 0 chr17 11487530 11487555 -73950925 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1056 245 103 142 chr17 11487555 11487835 -73950645 - L2 LINE L2 -1737 1577 1366 644 179 18 0 chr17 11487838 11487950 -73950530 - MER81 DNA DNA 0 114 1 459 0 0 0 chr17 11489781 11489832 -73948648 + (TA)n Simple_repeat Simple_repeat 1 51 0 320 196 254 14 chr17 11491193 11491331 -73947149 + MIR SINE MIR 15 185 -77 532 216 136 19 chr17 11491423 11491585 -73946895 + MER5A DNA MER1_type 9 189 0 24 0 0 0 chr17 11491585 11491609 -73946871 + AT_rich Low_complexity Low_complexity 1 24 0 208 274 119 0 chr17 11492692 11492776 -73945704 + MIR3 SINE MIR 105 198 -10 1624 163 58 73 chr17 11493302 11493714 -73944766 + MSTB1 LTR MaLR 27 432 0 287 310 66 51 chr17 11494141 11494473 -73944007 + L2 LINE L2 2360 2696 -618 712 352 72 20 chr17 11494756 11495202 -73943278 + L2 LINE L2 2804 3272 0 191 311 200 0 chr17 11495233 11495323 -73943157 + MIR SINE MIR 33 140 -68 526 190 66 0 chr17 11495683 11495804 -73942676 - L1MC4 LINE L1 0 8042 7914 215 192 19 19 chr17 11495839 11495891 -73942589 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 275 189 0 81 chr17 11495900 11495974 -73942506 - L1MC4 LINE L1 -123 7919 7852 924 70 0 0 chr17 11495980 11496095 -73942385 - AluY SINE Alu 0 311 197 593 202 40 33 chr17 11496095 11496280 -73942200 - L1MC4 LINE L1 -95 7713 7584 1152 272 71 63 chr17 11496286 11496498 -73941982 - L1M4 LINE L1 -1717 4429 4220 2591 71 0 0 chr17 11496498 11496808 -73941672 - AluSq SINE Alu -3 310 1 1152 272 71 63 chr17 11496808 11497393 -73941087 - L1M4 LINE L1 -1926 4220 3625 * 1932 44 0 0 chr17 11497387 11497614 -73940866 - L1P3 LINE L1 -408 5746 5520 2309 66 3 10 chr17 11497614 11497912 -73940568 + L1PA8 LINE L1 5870 6169 -3 315 0 0 0 chr17 11498386 11498421 -73940059 + (TG)n Simple_repeat Simple_repeat 2 36 0 651 285 54 67 chr17 11498435 11498841 -73939639 - HAL1b LINE L1 -714 634 260 2277 104 7 0 chr17 11499583 11499881 -73938599 - AluSc SINE Alu -9 300 1 24 53 0 0 chr17 11500016 11500054 -73938426 + AT_rich Low_complexity Low_complexity 1 38 0 2280 111 0 13 chr17 11500396 11500712 -73937768 - AluSx SINE Alu 0 312 1 240 376 73 13 chr17 11501362 11501676 -73936804 + L2 LINE L2 2429 2761 -553 1732 190 0 10 chr17 11502179 11502479 -73936001 - AluJb SINE Alu -5 307 11 463 323 59 11 chr17 11503573 11503759 -73934721 - MLT1I LTR MaLR -196 213 19 252 329 71 0 chr17 11506092 11506177 -73932303 + MER5A DNA MER1_type 78 168 -21 253 241 101 0 chr17 11506243 11506322 -73932158 - MER5A DNA MER1_type -80 109 23 389 263 38 97 chr17 11506354 11506512 -73931968 - MER5B DNA MER1_type -3 175 28 2242 98 30 0 chr17 11506512 11506808 -73931672 + AluSg SINE Alu 1 305 -5 389 263 38 97 chr17 11506808 11506835 -73931645 - MER5B DNA MER1_type -150 28 1 244 232 56 99 chr17 11507576 11507718 -73930762 + L2 LINE L2 3137 3272 0 995 247 20 12 chr17 11508076 11508327 -73930153 - MIR SINE MIR 0 262 10 1284 149 5 0 chr17 11509266 11509454 -73929026 + MER5A DNA MER1_type 1 189 0 2206 104 37 0 chr17 11510425 11510724 -73927756 + AluSg SINE Alu 1 310 0 534 317 82 0 chr17 11511298 11511481 -73926999 - MIR SINE MIR -18 244 47 750 231 11 2 chr17 11511706 11511886 -73926594 + MER5A DNA MER1_type 5 178 0 2480 80 0 0 chr17 11511947 11512258 -73926222 - AluY SINE Alu 0 311 1 2417 93 0 0 chr17 11512387 11512687 -73925793 - AluSx SINE Alu -12 300 1 391 271 78 26 chr17 11513113 11513305 -73925175 + MIR SINE MIR 48 249 -13 1615 77 0 0 chr17 11513530 11513726 -73924754 - AluY SINE Alu -10 301 106 272 179 221 0 chr17 11514479 11514574 -73923906 - MLT1H LTR MaLR -13 536 421 837 238 35 53 chr17 11514643 11514925 -73923555 - MLT1H LTR MaLR -251 298 22 423 176 20 26 chr17 11515022 11515175 -73923305 + CT-rich Low_complexity Low_complexity 3 154 0 2326 80 26 7 chr17 11515796 11516098 -73922382 + AluSg SINE Alu 1 308 -2 403 247 73 7 chr17 11516131 11516281 -73922199 - MIR SINE MIR -1 261 102 205 219 16 16 chr17 11516687 11516751 -73921729 + (TTG)n Simple_repeat Simple_repeat 3 66 0 1387 225 21 56 chr17 11516823 11517201 -73921279 - MLT1A1 LTR MaLR 0 365 1 289 262 10 19 chr17 11517289 11517392 -73921088 + MER103 DNA DNA 54 155 -11 336 291 196 10 chr17 11517795 11517994 -73920486 - MIR SINE MIR -6 256 21 29 47 0 0 chr17 11517994 11518037 -73920443 + AT_rich Low_complexity Low_complexity 1 43 0 199 355 16 33 chr17 11519464 11519585 -73918895 + MIR SINE MIR 48 166 -96 1667 39 0 10 chr17 11520011 11520217 -73918263 + L1PA4 LINE L1 5949 6152 -3 195 167 0 0 chr17 11520220 11520262 -73918218 + A-rich Low_complexity Low_complexity 1 42 0 25 51 0 0 chr17 11520306 11520345 -73918135 + AT_rich Low_complexity Low_complexity 1 39 0 2264 115 0 0 chr17 11520912 11521216 -73917264 + AluSx SINE Alu 1 304 -8 259 350 83 6 chr17 11521682 11521839 -73916641 - LTR67 LTR ERVL -263 294 126 2055 119 0 39 chr17 11523460 11523771 -73914709 + AluSx SINE Alu 1 299 -13 254 206 16 0 chr17 11524197 11524260 -73914220 + (TA)n Simple_repeat Simple_repeat 2 65 0 390 21 0 0 chr17 11524313 11524360 -73914120 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 460 278 57 60 chr17 11524811 11525160 -73913320 + L1MEd LINE L1 862 1209 -4910 228 268 30 81 chr17 11525216 11525451 -73913029 + HAL1 LINE L1 1450 1672 -835 21 0 0 0 chr17 11525689 11525710 -73912770 + AT_rich Low_complexity Low_complexity 1 21 0 2336 75 7 19 chr17 11525712 11526019 -73912461 + AluY SINE Alu 1 303 -8 248 188 125 31 chr17 11526027 11526123 -73912357 + L1MC4 LINE L1 7938 8042 0 304 231 112 15 chr17 11526296 11526430 -73912050 + MIR3 SINE MIR 7 153 -55 793 328 42 56 chr17 11526537 11527111 -73911369 - MLT1K LTR MaLR -10 578 13 2115 109 0 3 chr17 11528117 11528423 -73910057 - AluSg SINE Alu 0 305 1 210 71 0 0 chr17 11528592 11528620 -73909860 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 414 274 122 17 chr17 11529022 11529259 -73909221 - MIR SINE MIR 0 262 1 1086 204 4 40 chr17 11529559 11529766 -73908714 - MLT1F LTR MaLR 0 542 342 2524 70 0 16 chr17 11529766 11530079 -73908401 - AluY SINE Alu -3 308 1 1086 204 4 40 chr17 11530079 11530096 -73908384 - MLT1F LTR MaLR -200 342 326 1862 151 29 0 chr17 11530217 11530495 -73907985 - ERVL LTR ERVL -849 4915 4630 713 169 0 24 chr17 11530497 11530621 -73907859 + MLT1A1 LTR MaLR 211 331 -34 * 1856 210 31 3 chr17 11530599 11530952 -73907528 - MLT2B2 LTR ERVL -152 363 1 549 196 0 6 chr17 11530952 11531095 -73907385 - MER89 LTR ERV1 -318 241 1 1480 227 106 31 chr17 11531801 11532188 -73906292 + MLT2B1 LTR ERVL 1 416 -104 523 271 151 9 chr17 11532721 11532939 -73905541 - MIR SINE MIR -13 249 1 351 0 0 0 chr17 11533319 11533358 -73905122 + (TA)n Simple_repeat Simple_repeat 1 39 0 411 21 0 0 chr17 11533455 11533503 -73904977 + (TA)n Simple_repeat Simple_repeat 2 49 0 2319 200 69 95 chr17 11533620 11534046 -73904434 - L1ME1 LINE L1 -5 6161 5768 930 138 0 0 chr17 11534046 11534220 -73904260 + (TA)n Simple_repeat Simple_repeat 1 174 0 2319 200 69 95 chr17 11534220 11534664 -73903816 - L1ME1 LINE L1 -398 5768 5314 221 234 26 13 chr17 11534668 11534745 -73903735 + T-rich Low_complexity Low_complexity 2 79 0 1836 157 0 20 chr17 11534840 11535140 -73903340 - AluJo SINE Alu -18 294 1 589 132 0 19 chr17 11535143 11535249 -73903231 - L1ME1 LINE L1 -852 5294 5191 649 211 8 0 chr17 11535250 11535378 -73903102 - L1MEc LINE L1 -6159 237 109 320 222 0 0 chr17 11535463 11535526 -73902954 + L1MEc LINE L1 36 98 -6298 198 0 0 0 chr17 11535526 11535548 -73902932 + (TA)n Simple_repeat Simple_repeat 2 23 0 560 249 75 0 chr17 11535740 11535913 -73902567 - MIR SINE MIR -8 254 69 4076 105 2 2 chr17 11536843 11537397 -73901083 - MER41A LTR ERV1 0 554 1 2341 96 7 0 chr17 11538719 11539020 -73899460 - AluSp SINE Alu -8 305 3 1599 144 8 8 chr17 11539649 11539912 -73898568 - Tigger5 DNA MER2_type 0 2323 2061 1121 238 33 0 chr17 11539923 11540133 -73898347 - Tigger5 DNA MER2_type -2105 218 2 200 227 0 0 chr17 11540328 11540372 -73898108 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 2372 86 0 0 chr17 11540535 11540827 -73897653 - AluSx SINE Alu -20 292 1 376 281 8 16 chr17 11541126 11541247 -73897233 + MIR SINE MIR 143 262 0 1598 195 27 27 chr17 11542051 11542420 -73896060 + Charlie1b DNA MER1_type 154 522 -1 728 306 73 38 chr17 11543671 11544066 -73894414 + MLT1I LTR MaLR 1 409 0 2360 69 0 20 chr17 11544364 11544667 -73893813 - AluSc SINE Alu -12 297 1 845 228 11 0 chr17 11544898 11545082 -73893398 - MER5A DNA MER1_type -3 186 1 425 345 0 24 chr17 11545756 11545921 -73892559 - MIR3 SINE MIR -25 183 23 274 175 88 25 chr17 11546063 11546143 -73892337 - MIR3 SINE MIR -13 195 111 204 40 0 0 chr17 11546960 11546985 -73891495 + (TG)n Simple_repeat Simple_repeat 2 26 0 399 91 0 0 chr17 11547661 11547716 -73890764 + MADE1 DNA Mariner 1 55 -25 351 20 0 59 chr17 11547734 11547785 -73890695 + MADE1 DNA Mariner 32 79 -1 498 271 63 24 chr17 11547873 11548080 -73890400 - L1MB8 LINE L1 -9 6169 5955 518 259 99 12 chr17 11549467 11549629 -73888851 - MIR3 SINE MIR -14 194 19 270 81 0 0 chr17 11551263 11551300 -73887180 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 201 214 14 43 chr17 11553834 11553904 -73884576 + (CCCCG)n Simple_repeat Simple_repeat 5 72 0 196 240 281 10 chr17 11554645 11554741 -73883739 + MER5A DNA MER1_type 42 163 -26 * 472 182 30 10 chr17 11554670 11554769 -73883711 - MER5A DNA MER1_type -80 109 9 188 240 20 0 chr17 11560835 11560885 -73877595 + MIR SINE MIR 27 77 -131 2231 111 0 7 chr17 11561856 11562153 -73876327 + AluSg SINE Alu 1 295 -15 268 196 0 0 chr17 11563048 11563094 -73875386 - L1MB8 LINE L1 -2095 5713 5668 238 287 11 23 chr17 11563139 11563226 -73875254 + L1MC/D LINE L1 5665 5750 -2058 213 39 0 0 chr17 11563744 11563770 -73874710 + (TA)n Simple_repeat Simple_repeat 2 27 0 578 316 19 5 chr17 11563976 11564182 -73874298 - MIR SINE MIR -39 223 15 792 316 41 49 chr17 11564389 11565261 -73873219 - L1M4 LINE L1 -2887 3259 2396 2202 103 3 29 chr17 11565261 11565572 -73872908 - AluSx SINE Alu -9 303 1 792 316 41 49 chr17 11565572 11565734 -73872746 - L1M4 LINE L1 -3750 2396 2234 1451 278 108 25 chr17 11566098 11566619 -73871861 + MLT1G1 LTR MaLR 4 567 -28 4893 182 36 33 chr17 11566620 11567228 -73871252 - L1MD1 LINE L1 -34 7019 6414 2398 86 0 3 chr17 11567228 11567532 -73870948 - AluY SINE Alu -8 303 1 4893 182 36 33 chr17 11567532 11568215 -73870265 - L1MD1 LINE L1 -639 6414 5733 1653 228 23 56 chr17 11568222 11568778 -73869702 - L1MB8 LINE L1 -1144 5002 4465 281 245 133 40 chr17 11568783 11568934 -73869546 - L1MD1 LINE L1 -4314 2824 2660 882 226 42 49 chr17 11569689 11569976 -73868504 - L1MD1 LINE L1 -4632 2506 2222 573 266 56 48 chr17 11570054 11570306 -73868174 - L1MD1 LINE L1 -6577 282 29 405 239 99 0 chr17 11571108 11571235 -73867245 - MIR3 SINE MIR -48 160 9 356 226 96 17 chr17 11571419 11571534 -73866946 - MER103 DNA DNA -9 157 34 928 318 98 13 chr17 11571558 11572030 -73866450 - LTR33 LTR ERVL -9 512 1 207 297 0 0 chr17 11572714 11572778 -73865702 + (TG)n Simple_repeat Simple_repeat 1 64 0 2139 117 0 3 chr17 11572969 11573295 -73865185 + AluSx SINE Alu 1 325 0 298 299 86 46 chr17 11573454 11573628 -73864852 - MER5A DNA MER1_type 0 189 9 2113 103 4 11 chr17 11573850 11574161 -73864319 + AluSg SINE Alu 1 309 0 348 272 0 22 chr17 11576189 11576281 -73862199 + L1MC4 LINE L1 6614 6703 -1339 337 299 0 0 chr17 11576206 11576293 -73862187 - L1MC4 LINE L1 -1340 6702 6616 * 414 181 0 0 chr17 11576281 11576293 -73862187 + (TA)n Simple_repeat Simple_repeat 3 106 0 248 0 31 0 chr17 11576293 11576325 -73862155 + (CA)n Simple_repeat Simple_repeat 2 34 0 375 292 200 31 chr17 11576352 11576547 -73861933 - MIR SINE MIR -34 228 1 2082 108 0 19 chr17 11577049 11577363 -73861117 - AluSc SINE Alu -1 308 1 281 357 36 36 chr17 11577457 11577625 -73860855 + L2 LINE L2 2948 3115 -157 191 184 143 41 chr17 11577835 11577884 -73860596 + L2 LINE L2 3256 3309 -4 1914 104 3 92 chr17 11577903 11578241 -73860239 + AluSq SINE Alu 1 308 -5 2340 69 3 0 chr17 11578320 11578623 -73859857 + AluY SINE Alu 1 304 -7 225 0 0 0 chr17 11579446 11579471 -73859009 + (A)n Simple_repeat Simple_repeat 1 25 0 217 267 0 0 chr17 11579692 11579737 -73858743 + (CA)n Simple_repeat Simple_repeat 2 46 0 1408 147 12 4 chr17 11580224 11580476 -73858004 - L1MA7 LINE L1 0 6291 6038 613 239 46 0 chr17 11580561 11580691 -73857789 - MIR SINE MIR -48 214 79 513 32 0 0 chr17 11580936 11580999 -73857481 + (CA)n Simple_repeat Simple_repeat 2 64 0 193 176 106 59 chr17 11581003 11581088 -73857392 - MIR SINE MIR -158 104 16 227 281 96 15 chr17 11581944 11582079 -73856401 - L1ME LINE L1 -347 5774 5629 371 241 112 101 chr17 11582149 11582562 -73855918 - L1ME LINE L1 -776 5370 5107 2226 92 0 19 chr17 11582984 11583300 -73855180 - AluSg SINE Alu 0 310 1 23 0 0 0 chr17 11583988 11584011 -73854469 + AT_rich Low_complexity Low_complexity 1 23 0 869 237 56 19 chr17 11584380 11584595 -73853885 - MER58A DNA MER1_type 0 224 2 495 128 8 96 chr17 11585231 11585274 -73853206 + L1MA4A LINE L1 6185 6230 -73 504 0 0 0 chr17 11585274 11585330 -73853150 + (TA)n Simple_repeat Simple_repeat 2 57 0 495 128 8 96 chr17 11585330 11585411 -73853069 + L1MA4A LINE L1 6230 6298 -5 1537 168 48 20 chr17 11586185 11586477 -73852003 - AluJb SINE Alu -12 300 1 2332 84 0 0 chr17 11586549 11586858 -73851622 - AluSc SINE Alu 0 309 1 354 261 57 76 chr17 11587358 11587412 -73851068 - L1ME4a LINE L1 -7 6114 6060 2260 99 3 6 chr17 11587412 11587726 -73850754 + AluSq SINE Alu 1 313 0 354 261 57 76 chr17 11587726 11587828 -73850652 - L1ME4a LINE L1 -61 6060 5961 2373 86 0 3 chr17 11588096 11588487 -73849993 - AluSp SINE Alu 0 390 1 402 102 0 0 chr17 11589491 11589550 -73848930 + AluJ SINE Alu 47 105 -207 864 172 12 24 chr17 11589755 11589924 -73848556 + AluJ SINE Alu 113 279 -33 22 0 0 54 chr17 11589927 11589946 -73848534 + AT_rich Low_complexity Low_complexity 1 19 -16 2370 81 0 0 chr17 11589946 11590256 -73848224 + AluY SINE Alu 1 310 -1 22 0 0 54 chr17 11590256 11590273 -73848207 + AT_rich Low_complexity Low_complexity 19 35 0 1655 150 6 67 chr17 11590392 11590706 -73847774 - AluJo SINE Alu -14 298 4 712 274 73 51 chr17 11591173 11591527 -73846953 - L2 LINE L2 -3 3310 2949 2003 294 145 49 chr17 11591726 11592535 -73845945 - L2 LINE L2 -677 2637 1907 2364 197 13 6 chr17 11592535 11593008 -73845472 - L1MB3 LINE L1 -2 6181 5706 2003 294 145 49 chr17 11593008 11593400 -73845080 - L2 LINE L2 -1407 1907 1554 599 210 27 75 chr17 11593400 11593586 -73844894 - MER5B DNA MER1_type -1 177 1 2003 294 145 49 chr17 11593586 11593698 -73844782 - L2 LINE L2 -1760 1554 1196 345 82 0 0 chr17 11593717 11593766 -73844714 + (TG)n Simple_repeat Simple_repeat 2 50 0 341 268 191 41 chr17 11593901 11594095 -73844385 - MIR SINE MIR -26 236 14 1620 148 4 11 chr17 11594406 11594684 -73843796 + AluJo SINE Alu 1 276 -36 2636 103 69 2 chr17 11594693 11595099 -73843381 + MER4C LTR ERV1 12 444 -21 180 242 66 66 chr17 11595122 11595213 -73843267 + L2 LINE L2 2193 2283 -1031 280 272 12 0 chr17 11595508 11595589 -73842891 - MER63 DNA MER1_type -2 1060 979 369 269 50 25 chr17 11595593 11595712 -73842768 - MER63 DNA MER1_type -88 748 1 839 260 59 0 chr17 11596525 11596779 -73841701 + LTR16A1 LTR ERVL 189 457 0 547 69 46 0 chr17 11596842 11596929 -73841551 + CT-rich Low_complexity Low_complexity 3 93 0 470 169 0 0 chr17 11596940 11597023 -73841457 - AluS SINE Alu -2 308 226 225 324 0 0 chr17 11597253 11597321 -73841159 - LTR16C LTR ERVL -16 475 408 194 333 17 0 chr17 11597855 11597915 -73840565 + L2 LINE L2 3203 3263 -9 196 250 141 16 chr17 11598574 11598638 -73839842 + L3b LINE CR1 1214 1285 -298 372 244 57 8 chr17 11598795 11598918 -73839562 + L1P4 LINE L1 5339 5467 -707 311 280 27 70 chr17 11598934 11599091 -73839389 - L1MC4 LINE L1 -1339 6983 1933 410 265 193 16 chr17 11599141 11599519 -73838961 + L1ME4a LINE L1 5555 5999 -122 21 57 0 0 chr17 11599609 11599644 -73838836 + AT_rich Low_complexity Low_complexity 1 35 0 329 271 193 29 chr17 11600122 11600262 -73838218 - MIR3 SINE MIR -16 192 30 241 164 66 16 chr17 11600642 11600703 -73837777 - L1M4 LINE L1 -396 5788 5725 2954 58 3 11 chr17 11600745 11601125 -73837355 - L1PA8 LINE L1 -3 6169 5793 644 284 70 23 chr17 11601129 11601344 -73837136 - MIR SINE MIR -36 226 2 230 320 68 19 chr17 11601467 11601570 -73836910 - MIR SINE MIR -150 112 5 216 273 15 30 chr17 11601966 11602032 -73836448 - L2 LINE L2 -219 3053 2989 243 235 274 20 chr17 11602729 11602831 -73835649 + MIR SINE MIR 85 212 -50 565 308 123 8 chr17 11603234 11603487 -73834993 + L2 LINE L2 3031 3312 -1 357 109 0 0 chr17 11603618 11603673 -73834807 + (GGGGA)n Simple_repeat Simple_repeat 5 59 0 1047 161 144 69 chr17 11603730 11604021 -73834459 + MLT1A1 LTR MaLR 53 365 0 228 281 34 45 chr17 11604021 11604110 -73834370 - MIR3 SINE MIR -118 90 3 496 345 82 0 chr17 11604992 11605186 -73833294 - MIR SINE MIR -2 260 51 279 267 20 30 chr17 11605893 11605994 -73832486 + GA-rich Low_complexity Low_complexity 2 101 0 650 209 7 27 chr17 11608979 11609127 -73829353 + MIR3 SINE MIR 45 189 -19 2119 118 3 0 chr17 11609459 11609765 -73828715 - AluSx SINE Alu -5 307 1 2722 10 0 0 chr17 11609778 11610083 -73828397 - AluY SINE Alu -6 305 1 251 71 24 0 chr17 11610480 11610522 -73827958 + (TC)n Simple_repeat Simple_repeat 2 44 0 2180 75 4 0 chr17 11610817 11611095 -73827385 + AluSq SINE Alu 19 297 -16 619 301 101 5 chr17 11611106 11611315 -73827165 + MIR SINE MIR 2 230 -32 913 194 91 0 chr17 11611395 11611581 -73826899 + MER3 DNA MER1_type 7 209 0 394 226 105 16 chr17 11611646 11611770 -73826710 + MIR3 SINE MIR 46 180 -28 238 308 60 60 chr17 11611772 11611889 -73826591 + MER91C DNA MER1_type 1 117 -23 1978 160 0 0 chr17 11612209 11612521 -73825959 + AluSx SINE Alu 1 312 0 364 238 117 67 chr17 11613270 11613505 -73824975 - MIR SINE MIR -3 259 3 216 218 0 36 chr17 11613509 11613546 -73824934 + CT-rich Low_complexity Low_complexity 5 41 -16 1402 166 12 0 chr17 11613546 11613793 -73824687 - L1MA4 LINE L1 -5 6295 6046 216 218 0 36 chr17 11613793 11613810 -73824670 + CT-rich Low_complexity Low_complexity 41 57 0 429 317 7 28 chr17 11614751 11614893 -73823587 + L2 LINE L2 2593 2731 -583 656 258 81 10 chr17 11615224 11615433 -73823047 + MER102a DNA MER1_type 79 302 -28 2376 75 0 3 chr17 11615445 11615753 -73822727 - AluSg SINE Alu -3 307 1 432 82 0 0 chr17 11616177 11616238 -73822242 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 195 189 44 103 chr17 11616906 11617011 -73821469 - MIR SINE MIR -73 135 40 373 292 0 0 chr17 11617109 11617198 -73821282 - MER81 DNA DNA -1 113 25 689 247 80 0 chr17 11617250 11617412 -73821068 - MER5B DNA MER1_type -2 176 2 204 40 0 0 chr17 11618604 11618629 -73819851 + (TG)n Simple_repeat Simple_repeat 1 25 0 2076 133 3 0 chr17 11618684 11618993 -73819487 + AluSx SINE Alu 1 310 -2 226 325 16 71 chr17 11619701 11619827 -73818653 - MIR3 SINE MIR -81 127 9 2185 94 3 3 chr17 11620142 11620440 -73818040 + AluSc SINE Alu 1 298 -11 1329 149 4 56 chr17 11620645 11620914 -73817566 + AluJo SINE Alu 39 293 -19 194 244 44 100 chr17 11621009 11621099 -73817381 - MIR SINE MIR -105 103 19 1008 158 12 122 chr17 11622263 11622509 -73815971 - MER20 DNA MER1_type 0 219 1 268 284 75 75 chr17 11622567 11622768 -73815712 + MIR SINE MIR 46 246 -16 1061 269 90 79 chr17 11623272 11623769 -73814711 + MLT1K LTR MaLR 26 588 0 340 244 8 87 chr17 11623829 11623956 -73814524 + MIR3 SINE MIR 89 205 -3 916 226 61 5 chr17 11625088 11625300 -73813180 - MER58A DNA MER1_type 0 224 1 306 296 64 40 chr17 11625748 11625873 -73812607 - L2 LINE L2 -9 3263 3136 2233 124 7 0 chr17 11627512 11627811 -73810669 + AluSx SINE Alu 1 301 -11 1625 149 8 0 chr17 11628271 11628513 -73809967 - AluJo SINE Alu -46 266 23 309 250 114 81 chr17 11628722 11628895 -73809585 - L1MDa LINE L1 -3890 2650 2484 2398 91 3 0 chr17 11628895 11629191 -73809289 - AluSp SINE Alu -16 297 1 309 250 114 81 chr17 11629191 11629349 -73809131 - L1MDa LINE L1 -4056 2484 2308 317 268 63 90 chr17 11629728 11630027 -73808453 - HAL1b LINE L1 -781 567 277 2291 111 0 0 chr17 11630420 11630717 -73807763 + AluSg SINE Alu 1 297 -13 23 54 0 0 chr17 11630729 11630766 -73807714 + AT_rich Low_complexity Low_complexity 1 37 0 279 0 0 0 chr17 11630823 11630843 -73807637 + (CA)n Simple_repeat Simple_repeat 1 51 0 279 0 0 0 chr17 11630843 11630874 -73807606 + (CA)n Simple_repeat Simple_repeat 2 32 0 1991 154 0 0 chr17 11630928 11631214 -73807266 - AluSx SINE Alu -26 286 1 189 107 0 0 chr17 11631793 11631821 -73806659 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 7847 208 76 68 chr17 11631843 11632438 -73806042 + L1MC1 LINE L1 1295 1884 -4542 203 88 29 0 chr17 11632438 11632472 -73806008 + (TA)n Simple_repeat Simple_repeat 1 35 0 7847 208 76 68 chr17 11632472 11632570 -73805910 + L1MC1 LINE L1 1884 1980 -4446 3054 59 0 0 chr17 11632570 11632945 -73805535 - L1PA8 LINE L1 0 6172 5798 7847 208 76 68 chr17 11632945 11632965 -73805515 + L1MC1 LINE L1 1980 1998 -4428 534 100 0 0 chr17 11632965 11633035 -73805445 - Alu SINE Alu -22 289 220 7847 208 76 68 chr17 11633035 11633236 -73805244 + L1MC1 LINE L1 1998 2196 -4230 7940 19 0 0 chr17 11633236 11634787 -73803693 + L1PA2 LINE L1 4600 6150 -5 7847 208 76 68 chr17 11634787 11637719 -73800761 + L1MC1 LINE L1 2196 5245 -1181 3001 86 3 4 chr17 11637721 11638466 -73800014 + L1PA8 LINE L1 5507 6448 -4 641 198 69 85 chr17 11638587 11638886 -73799594 + MLT1A1 LTR MaLR 37 349 -47 3521 159 40 12 chr17 11638886 11639712 -73798768 + L1MC1 LINE L1 5260 6108 -505 1273 208 0 8 chr17 11639716 11639952 -73798528 + AluJo SINE Alu 5 238 -74 2884 152 31 2 chr17 11639953 11640439 -73798041 + L1MC1 LINE L1 6114 6613 0 284 271 0 12 chr17 11640612 11640697 -73797783 - L2 LINE L2 -245 3068 2985 325 289 26 39 chr17 11640943 11640977 -73797503 + LTR33 LTR ERVL 303 336 -185 2399 98 3 0 chr17 11640977 11641283 -73797197 - AluSx SINE Alu -5 307 1 325 289 26 39 chr17 11641283 11641404 -73797076 + LTR33 LTR ERVL 336 456 -65 1449 179 50 64 chr17 11642011 11642368 -73796112 - MLT1B LTR MaLR -24 366 15 1984 177 174 0 chr17 11642662 11643092 -73795388 - MLT1D LTR MaLR 0 505 1 2351 87 16 10 chr17 11643163 11643472 -73795008 - AluSx SINE Alu -1 311 1 207 288 42 93 chr17 11644110 11644228 -73794252 + MIR3 SINE MIR 94 205 -3 308 282 13 0 chr17 11644938 11645016 -73793464 + L2 LINE L2 3189 3267 -5 515 196 122 0 chr17 11645672 11645779 -73792701 + MLT1D LTR MaLR 2 121 -384 720 163 47 0 chr17 11646666 11646795 -73791685 + AluJb SINE Alu 157 291 -21 2325 85 10 0 chr17 11647256 11647550 -73790930 - AluSq SINE Alu -16 297 1 2081 152 0 0 chr17 11647994 11648297 -73790183 + AluJo SINE Alu 1 303 -9 491 275 31 33 chr17 11648421 11648669 -73789811 + L1MC4a LINE L1 5734 5998 -123 578 280 48 0 chr17 11648888 11649056 -73789424 - MIR SINE MIR 0 262 87 2127 110 3 23 chr17 11649301 11649602 -73788878 + AluSx SINE Alu 18 312 0 2871 187 26 6 chr17 11650250 11650785 -73787695 + MER74A LTR ERVL 1 546 -12 2414 79 0 0 chr17 11650791 11651082 -73787398 - AluY SINE Alu -7 304 14 28 29 0 0 chr17 11651109 11651144 -73787336 + AT_rich Low_complexity Low_complexity 1 35 0 2198 92 4 0 chr17 11651532 11651825 -73786655 + AluSp SINE Alu 13 306 0 451 277 116 18 chr17 11651959 11652183 -73786297 - L3b LINE CR1 -199 1384 1139 333 273 7 148 chr17 11652664 11652961 -73785519 - L2 LINE L2 -9 3263 3009 2395 61 0 45 chr17 11652974 11653287 -73785193 - AluY SINE Alu -12 299 1 360 281 7 22 chr17 11653306 11653441 -73785039 - MIR SINE MIR -67 195 63 2423 90 0 0 chr17 11654108 11654407 -73784073 - AluY SINE Alu -12 299 1 2225 104 0 36 chr17 11654454 11654761 -73783719 - AluSg SINE Alu -14 296 1 185 359 148 0 chr17 11655657 11655785 -73782695 - MIR3 SINE MIR -48 160 14 381 223 97 10 chr17 11656816 11656919 -73781561 - MIR SINE MIR -11 251 140 202 287 83 89 chr17 11656992 11657010 -73781470 - L2 LINE L2 0 3313 3296 2220 104 0 0 chr17 11657010 11657323 -73781157 - AluY SINE Alu 0 313 1 202 287 83 89 chr17 11657323 11657460 -73781020 - L2 LINE L2 -17 3296 3158 628 286 100 46 chr17 11657494 11658094 -73780386 - L2 LINE L2 -254 3059 2423 590 188 17 7 chr17 11658159 11658309 -73780171 + L1MC/D LINE L1 5587 5697 -469 * 1012 206 15 0 chr17 11658307 11658506 -73779974 - L1ME1 LINE L1 -173 5993 5792 23 33 0 0 chr17 11658545 11658575 -73779905 + AT_rich Low_complexity Low_complexity 1 30 0 366 170 20 20 chr17 11659227 11659327 -73779153 + GA-rich Low_complexity Low_complexity 1 100 0 609 149 22 33 chr17 11659408 11659589 -73778891 + GA-rich Low_complexity Low_complexity 2 180 0 493 295 44 18 chr17 11660299 11660526 -73777954 - L3 LINE CR1 -48 1529 1297 287 307 132 39 chr17 11660564 11660844 -73777636 + L2 LINE L2 3008 3313 0 24 0 0 0 chr17 11661197 11661221 -73777259 + AT_rich Low_complexity Low_complexity 1 24 0 667 95 11 0 chr17 11661497 11661592 -73776888 - AluSp/q SINE Alu -11 302 207 1794 115 0 8 chr17 11661592 11661836 -73776644 - AluSq SINE Alu -71 242 1 1558 227 89 18 chr17 11661849 11662025 -73776455 + MLT1C LTR MaLR 1 163 -304 2508 57 0 7 chr17 11662025 11662325 -73776155 + AluY SINE Alu 1 298 -13 1558 227 89 18 chr17 11662325 11662584 -73775896 + MLT1C LTR MaLR 163 467 0 2134 129 3 19 chr17 11662734 11663051 -73775429 - AluSx SINE Alu 0 312 1 2135 104 11 0 chr17 11663385 11663664 -73774816 - AluSq SINE Alu -31 282 1 1705 155 14 17 chr17 11663666 11663962 -73774518 - AluJo SINE Alu -17 295 1 455 156 44 11 chr17 11665869 11665959 -73772521 - L1MD2 LINE L1 -208 6151 6059 410 353 32 64 chr17 11665969 11666093 -73772387 + L2 LINE L2 2932 3058 -214 2311 103 0 0 chr17 11666093 11666395 -73772085 + AluSg SINE Alu 9 310 0 410 353 32 64 chr17 11666395 11666616 -73771864 + L2 LINE L2 3058 3266 -6 844 234 18 31 chr17 11666849 11667075 -73771405 + MLT1A1 LTR MaLR 1 223 -142 191 86 0 29 chr17 11667604 11667639 -73770841 + (TTTTTG)n Simple_repeat Simple_repeat 6 39 0 2193 130 10 0 chr17 11667866 11668174 -73770306 - AluSx SINE Alu -1 311 1 278 200 40 40 chr17 11668352 11668427 -73770053 - L2 LINE L2 -4 3309 3235 192 77 0 0 chr17 11668463 11668489 -73769991 + (CTA)n Simple_repeat Simple_repeat 1 26 0 455 231 88 44 chr17 11668498 11668658 -73769822 - MIR SINE MIR -4 258 92 698 226 83 8 chr17 11669561 11669786 -73768694 - MIR SINE MIR -19 243 7 231 298 39 39 chr17 11672038 11672142 -73766338 + L2 LINE L2 3210 3313 0 224 277 15 15 chr17 11672631 11672696 -73765784 - MIR SINE MIR -164 98 34 617 225 135 52 chr17 11673075 11673342 -73765138 + LTR16A1 LTR ERVL 163 451 -6 1551 172 35 118 chr17 11673471 11673896 -73764584 + MLT1B LTR MaLR 1 390 0 215 265 229 18 chr17 11675496 11675662 -73762818 - L2 LINE L2 -1 3312 3112 950 208 15 15 chr17 11675826 11676023 -73762457 - MLT1A2 LTR MaLR 0 390 194 202 182 0 0 chr17 11676033 11676066 -73762414 + polypurine Low_complexity Low_complexity 1 33 0 276 111 0 0 chr17 11677056 11677101 -73761379 + (GA)n Simple_repeat Simple_repeat 2 46 0 1007 161 36 0 chr17 11677112 11677280 -73761200 - MLT1A2 LTR MaLR -200 174 1 2126 146 0 3 chr17 11677848 11678157 -73760323 + AluSg SINE Alu 1 308 -2 803 52 0 0 chr17 11678562 11678658 -73759822 - L1PA7 LINE L1 -479 5652 5557 * 3691 69 0 2 chr17 11678656 11679123 -73759357 + L1PA7 LINE L1 5683 6148 -6 2458 142 7 30 chr17 11679129 11679565 -73758915 - L1MB8 LINE L1 -5 6173 5748 334 286 0 20 chr17 11679597 11679695 -73758785 + LTR67 LTR ERVL 459 554 -3 203 0 37 0 chr17 11680388 11680415 -73758065 + (TTTTTG)n Simple_repeat Simple_repeat 5 32 0 786 263 129 54 chr17 11681648 11682021 -73756459 - MLT1I LTR MaLR -3 406 6 331 318 56 16 chr17 11682030 11682156 -73756324 + MIR SINE MIR 20 150 -58 222 37 0 0 chr17 11682369 11682396 -73756084 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 2051 108 0 34 chr17 11682397 11682712 -73755768 - AluSp SINE Alu 0 305 1 1767 234 106 48 chr17 11682783 11683122 -73755358 + MLT1E LTR MaLR 15 400 -193 2524 70 0 16 chr17 11683122 11683435 -73755045 + AluY SINE Alu 1 308 -3 1767 234 106 48 chr17 11683435 11683642 -73754838 + MLT1E LTR MaLR 400 593 0 414 274 122 17 chr17 11683942 11684179 -73754301 + MIR SINE MIR 1 262 0 210 71 0 0 chr17 11684581 11684609 -73753871 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 917 64 0 0 chr17 11684778 11684887 -73753593 + AluSg SINE Alu 1 109 -201 200 329 12 24 chr17 11685461 11685546 -73752934 + MIR SINE MIR 63 146 -62 256 335 60 22 chr17 11685604 11685789 -73752691 + MLT1J LTR MaLR 127 318 -193 2533 43 40 0 chr17 11686194 11686493 -73751987 + AluY SINE Alu 1 311 0 200 361 0 0 chr17 11686786 11686858 -73751622 - MIR SINE MIR 0 262 191 1300 206 35 45 chr17 11686858 11687242 -73751238 + L1ME1 LINE L1 5797 6333 -1 303 273 45 0 chr17 11687265 11687353 -73751127 + L1MB1 LINE L1 5746 5837 -333 2538 104 28 0 chr17 11687381 11687735 -73750745 + THE1B LTR MaLR 1 364 0 2182 100 0 23 chr17 11687935 11688234 -73750246 - AluSx SINE Alu -16 296 5 26 0 0 0 chr17 11688522 11688548 -73749932 + AT_rich Low_complexity Low_complexity 1 26 0 435 237 45 42 chr17 11688549 11688728 -73749752 - L1ME4a LINE L1 -158 5963 5784 898 137 0 0 chr17 11689492 11689623 -73748857 + AluSg/x SINE Alu 170 300 -12 22 0 0 0 chr17 11689757 11689779 -73748701 + AT_rich Low_complexity Low_complexity 1 22 0 47 78 0 0 chr17 11689810 11689913 -73748567 + AT_rich Low_complexity Low_complexity 1 103 0 762 299 23 23 chr17 11690014 11690275 -73748205 + MIR SINE MIR 2 262 0 2634 176 80 20 chr17 11690585 11690657 -73747823 - MER63 DNA MER1_type -37 1024 958 2255 106 0 7 chr17 11690657 11690959 -73747521 + AluSq SINE Alu 1 300 -13 2634 176 80 20 chr17 11690959 11691447 -73747033 - MER63 DNA MER1_type -103 958 430 368 243 87 27 chr17 11692279 11692418 -73746062 + MIR3 SINE MIR 34 181 -27 323 276 78 0 chr17 11694108 11694224 -73744256 + MIR3 SINE MIR 81 205 -3 2320 83 0 22 chr17 11695091 11695403 -73743077 - AluSg1 SINE Alu -4 305 1 209 281 0 18 chr17 11695654 11695711 -73742769 - MIR SINE MIR -136 72 17 477 279 25 6 chr17 11696929 11697087 -73741393 - MIR SINE MIR -59 203 43 869 168 8 107 chr17 11697127 11697371 -73741109 - L1MA10 LINE L1 0 6334 6115 1499 173 49 20 chr17 11697374 11697720 -73740760 + L1MB1 LINE L1 5812 6167 -22 2393 63 0 0 chr17 11699031 11699315 -73739165 + AluY SINE Alu 25 308 -3 2482 72 0 3 chr17 11701269 11701573 -73736907 + AluSc SINE Alu 2 304 -5 2994 139 4 44 chr17 11701832 11701967 -73736513 + L1PB4 LINE L1 5651 5790 -366 2219 121 0 13 chr17 11701967 11702100 -73736380 + AluSx SINE Alu 4 137 -175 2307 81 3 7 chr17 11702100 11702396 -73736084 + AluSc SINE Alu 1 295 -14 2219 121 0 13 chr17 11702396 11702568 -73735912 + AluSx SINE Alu 137 305 -7 2994 139 4 44 chr17 11702568 11702956 -73735524 + L1PB4 LINE L1 5790 6153 -3 326 175 0 0 chr17 11704785 11704842 -73733638 - AluS SINE Alu -246 57 1 1055 157 6 0 chr17 11704850 11705028 -73733452 - L1MB1 LINE L1 -70 6119 5941 2134 131 33 46 chr17 11705634 11705792 -73732688 + THE1B LTR MaLR 3 162 -202 2160 105 24 3 chr17 11705792 11706086 -73732394 - AluY SINE Alu -11 300 1 2134 131 33 46 chr17 11706086 11706294 -73732186 + THE1B LTR MaLR 162 364 0 258 32 0 0 chr17 11706375 11706406 -73732074 + (TG)n Simple_repeat Simple_repeat 2 32 0 6058 106 5 20 chr17 11706550 11708274 -73730206 + L1PA14 LINE L1 4439 6159 -2 2102 78 4 8 chr17 11708413 11708681 -73729799 - AluSq SINE Alu -24 289 23 221 56 0 28 chr17 11709386 11709422 -73729058 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1494 97 0 10 chr17 11709422 11709618 -73728862 - AluSc SINE Alu -32 277 84 957 283 86 52 chr17 11709886 11710773 -73727707 - L1M4 LINE L1 -1541 4605 3689 377 308 118 21 chr17 11710898 11711641 -73726839 - L1M4 LINE L1 -2683 3463 2649 804 174 0 8 chr17 11711803 11711935 -73726545 - FLAM_C SINE Alu -2 131 1 441 329 52 41 chr17 11712017 11712479 -73726001 + L1M4 LINE L1 4553 5019 -1127 2441 84 0 0 chr17 11712712 11713011 -73725469 + AluY SINE Alu 11 309 -2 2093 111 0 74 chr17 11713739 11714063 -73724417 - AluSg SINE Alu -10 300 1 233 354 120 6 chr17 11714710 11714868 -73723612 - L2 LINE L2 0 3272 3097 378 275 9 18 chr17 11715020 11715129 -73723351 - HAL1 LINE L1 -586 1921 1814 536 270 147 5 chr17 11715160 11715371 -73723109 - HAL1 LINE L1 -766 1741 1501 1080 82 94 13 chr17 11715412 11715571 -73722909 + THE1C LTR MaLR 1 172 -203 832 164 31 13 chr17 11715757 11715916 -73722564 + THE1C LTR MaLR 180 341 -34 254 269 71 91 chr17 11716245 11716553 -73721927 - HAL1 LINE L1 -1361 1146 845 2327 92 0 0 chr17 11717958 11718252 -73720228 + AluSg SINE Alu 1 294 -16 207 359 59 12 chr17 11718321 11718491 -73719989 - L2 LINE L2 -226 3046 2869 711 364 30 21 chr17 11718612 11719087 -73719393 - L2 LINE L2 -608 2706 2228 187 333 8 68 chr17 11720105 11720222 -73718258 - MIR SINE MIR -61 147 38 310 111 0 0 chr17 11720453 11720498 -73717982 + MADE1 DNA Mariner 1 45 -35 527 127 13 0 chr17 11720626 11720705 -73717775 + MADE1 DNA Mariner 1 80 0 349 186 186 29 chr17 11721020 11721160 -73717320 + L1ME4a LINE L1 5764 5925 -196 273 180 37 149 chr17 11721263 11721424 -73717056 + MIR SINE MIR 48 190 -72 1208 187 190 13 chr17 11721493 11721803 -73716677 + MLT1A1 LTR MaLR 1 365 0 1093 297 17 26 chr17 11722356 11722774 -73715706 + L1ME4a LINE L1 5457 5870 -251 2174 138 0 0 chr17 11723406 11723704 -73714776 + AluSx SINE Alu 2 299 -13 601 294 44 24 chr17 11723805 11724057 -73714423 - MIR SINE MIR 0 262 6 454 303 14 0 chr17 11725796 11725941 -73712539 - MIR SINE MIR 0 262 116 538 172 31 31 chr17 11725949 11726077 -73712403 + L1MD3 LINE L1 7858 7985 -10 319 309 0 11 chr17 11726089 11726183 -73712297 - MIR SINE MIR -157 105 13 2118 93 0 0 chr17 11726367 11726676 -73711804 + AluY SINE Alu 17 325 0 1051 186 14 41 chr17 11726699 11726919 -73711561 + MER20 DNA MER1_type 6 219 0 593 230 8 16 chr17 11727022 11727148 -73711332 + MER5A DNA MER1_type 65 189 0 580 282 0 12 chr17 11727621 11727791 -73710689 + MER5B DNA MER1_type 4 171 -7 499 131 0 0 chr17 11727862 11727946 -73710534 - MER5A DNA MER1_type -80 109 26 2359 73 0 32 chr17 11728200 11728516 -73709964 - AluY SINE Alu -5 306 1 5222 26 5 3 chr17 11730076 11730687 -73707793 + L1PA4 LINE L1 5544 6155 0 483 259 0 0 chr17 11730797 11730963 -73707517 + (CAT)n Simple_repeat Simple_repeat 2 167 0 918 188 0 0 chr17 11730994 11731356 -73707124 + (CAT)n Simple_repeat Simple_repeat 1 362 0 532 206 119 46 chr17 11731360 11731554 -73706926 - MIR SINE MIR -10 252 45 402 250 0 0 chr17 11731617 11731699 -73706781 + Charlie8 DNA MER1_type 106 187 -2230 648 243 0 14 chr17 11731699 11731839 -73706641 + MER63 DNA MER1_type 1 764 -298 209 308 77 56 chr17 11733161 11733356 -73705124 + MIR SINE MIR 50 248 -14 191 30 0 61 chr17 11734732 11734765 -73703715 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 2479 93 0 3 chr17 11735008 11735319 -73703161 - AluSg SINE Alu 0 310 1 320 270 54 9 chr17 11735635 11735746 -73702734 - MER103 DNA DNA -7 159 44 2263 117 0 0 chr17 11736199 11736497 -73701983 - AluSx SINE Alu -10 302 5 559 243 181 25 chr17 11736582 11736825 -73701655 - L2 LINE L2 -5 3308 3028 3504 133 21 6 chr17 11736861 11737380 -73701100 + MER1A DNA MER1_type 1 527 0 3377 104 22 85 chr17 11737462 11738088 -73700392 + L1MA4 LINE L1 5711 6297 -3 2450 65 0 19 chr17 11738113 11738420 -73700060 + AluY SINE Alu 1 301 -10 204 162 40 54 chr17 11740364 11740438 -73698042 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 231 36 0 0 chr17 11740447 11740475 -73698005 + (TC)n Simple_repeat Simple_repeat 1 28 0 290 73 0 36 chr17 11740771 11740826 -73697654 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 480 238 14 28 chr17 11740960 11741103 -73697377 + MARNA DNA Mariner 9 149 -437 1421 62 0 0 chr17 11741660 11741837 -73696643 + L1PA5 LINE L1 5978 6154 0 206 367 61 0 chr17 11742260 11742358 -73696122 - MIR3 SINE MIR -34 174 71 292 264 64 18 chr17 11743337 11743447 -73695033 + L2 LINE L2 3199 3313 0 2086 195 50 82 chr17 11743564 11743909 -73694571 + L1ME1 LINE L1 5584 5904 -262 1656 192 0 10 chr17 11743909 11744200 -73694280 + AluJb SINE Alu 1 288 -24 2086 195 50 82 chr17 11744200 11744449 -73694031 + L1ME1 LINE L1 5904 6159 -7 834 132 0 83 chr17 11744690 11744834 -73693646 - FLAM_C SINE Alu 0 133 2 256 216 13 90 chr17 11745537 11745626 -73692854 - MIR3 SINE MIR -13 195 102 2310 107 10 0 chr17 11745705 11746014 -73692466 + AluSx SINE Alu 1 312 0 237 302 42 10 chr17 11746225 11746321 -73692159 + MIR SINE MIR 24 122 -140 436 292 54 71 chr17 11746504 11746744 -73691736 - L3 LINE CR1 -8 1569 1334 2119 182 133 7 chr17 11747008 11747577 -73690903 - MLT1E2 LTR MaLR 0 626 1 472 319 60 5 chr17 11747694 11747910 -73690570 + L3 LINE CR1 716 943 -634 377 330 35 20 chr17 11747992 11748195 -73690285 - L3 LINE CR1 -348 1229 1024 2564 199 51 57 chr17 11748413 11748527 -73689953 + L1MB7 LINE L1 5076 5189 -995 4805 89 5 0 chr17 11748527 11749178 -73689302 + L1PA14 LINE L1 5499 6152 -9 2564 199 51 57 chr17 11749178 11749864 -73688616 + L1MB7 LINE L1 5189 5867 -317 85 11 0 0 chr17 11749869 11749961 -73688519 + AT_rich Low_complexity Low_complexity 1 92 0 987 113 0 0 chr17 11749961 11750221 -73688259 + (TA)n Simple_repeat Simple_repeat 1 260 0 641 309 140 38 chr17 11750781 11751251 -73687229 + MLT1K LTR MaLR 67 584 -4 341 337 84 15 chr17 11751374 11751635 -73686845 + L1ME4a LINE L1 5270 5548 -811 696 259 60 14 chr17 11751684 11751966 -73686514 + L1ME4a LINE L1 5629 5923 -198 355 333 68 0 chr17 11753147 11753279 -73685201 - L2 LINE L2 -3 3269 3129 371 328 139 27 chr17 11753835 11754029 -73684451 - L2 LINE L2 0 3313 3142 378 0 0 0 chr17 11754029 11754071 -73684409 + (TC)n Simple_repeat Simple_repeat 2 43 0 * 504 0 0 0 chr17 11754070 11754126 -73684354 + (TG)n Simple_repeat Simple_repeat 1 56 0 371 328 139 27 chr17 11754071 11754340 -73684140 - L2 LINE L2 -171 3142 2859 202 322 100 11 chr17 11755642 11755732 -73682748 + L2 LINE L2 3134 3231 -41 1697 139 43 7 chr17 11756212 11756514 -73681966 - L1MA4A LINE L1 -6 6297 5985 299 311 91 15 chr17 11756523 11756655 -73681825 - MIR SINE MIR -74 188 47 2265 73 4 0 chr17 11757230 11757503 -73680977 + AluSp SINE Alu 28 301 -12 2572 61 7 3 chr17 11758965 11759275 -73679205 - AluY SINE Alu 0 311 1 361 306 136 13 chr17 11759293 11759669 -73678811 + L2 LINE L2 1817 2238 -1076 2188 115 0 10 chr17 11760104 11760417 -73678063 + AluSx SINE Alu 1 310 -2 284 186 52 93 chr17 11760471 11760568 -73677912 + L2 LINE L2 3197 3289 -24 2439 87 0 0 chr17 11762817 11763117 -73675363 - AluSg SINE Alu -10 300 1 237 128 81 12 chr17 11763680 11763766 -73674714 + (TA)n Simple_repeat Simple_repeat 2 93 0 300 106 25 62 chr17 11763804 11763965 -73674515 + (TTATA)n Simple_repeat Simple_repeat 5 159 0 39 80 0 0 chr17 11764014 11764102 -73674378 + AT_rich Low_complexity Low_complexity 1 88 0 23 33 0 0 chr17 11764597 11764627 -73673853 + AT_rich Low_complexity Low_complexity 1 30 0 1700 146 56 8 chr17 11764939 11765207 -73673273 + AluJo SINE Alu 11 291 -21 2093 238 108 35 chr17 11765515 11766240 -73672240 + L1MC4a LINE L1 5520 6303 -1505 902 204 44 0 chr17 11766261 11766442 -73672038 + MER5A DNA MER1_type 1 189 0 212 295 101 36 chr17 11766472 11766611 -73671869 - MIR SINE MIR -65 197 50 1931 122 7 4 chr17 11766898 11767355 -73671125 + AluY SINE Alu 1 458 0 1288 84 0 0 chr17 11767177 11767484 -73670996 + (GAAA)n Simple_repeat Simple_repeat 1 307 0 1630 171 67 131 chr17 11768375 11768527 -73669953 - Charlie1b DNA MER1_type -2261 500 340 2099 109 0 44 chr17 11768527 11768848 -73669632 + AluSx SINE Alu 1 307 -5 1630 171 67 131 chr17 11768848 11768873 -73669607 - Charlie1b DNA MER1_type -2421 340 315 2133 93 0 31 chr17 11768873 11769164 -73669316 + AluSg SINE Alu 1 282 -28 1630 171 67 131 chr17 11769164 11769506 -73668974 - Charlie1b DNA MER1_type -2446 315 13 521 252 8 0 chr17 11769800 11769923 -73668557 - MIR SINE MIR -93 169 46 2466 81 3 0 chr17 11769985 11770292 -73668188 + AluSg SINE Alu 1 308 -2 2377 95 3 0 chr17 11772964 11773270 -73665210 - AluSg SINE Alu -3 307 1 495 246 106 0 chr17 11773347 11773489 -73664991 + MER5B DNA MER1_type 1 157 -21 1633 129 4 4 chr17 11773999 11774232 -73664248 - AluSc SINE Alu -76 233 1 213 214 0 0 chr17 11774511 11774553 -73663927 + (TG)n Simple_repeat Simple_repeat 2 43 0 2352 86 0 0 chr17 11775993 11776284 -73662196 + AluY SINE Alu 12 302 -9 2177 108 0 0 chr17 11778614 11778918 -73659562 + AluSg SINE Alu 1 304 0 515 295 123 4 chr17 11778986 11779213 -73659267 + MARNA DNA Mariner 244 497 -89 672 203 25 19 chr17 11779283 11779441 -73659039 - MER5B DNA MER1_type -2 176 18 284 243 122 0 chr17 11779538 11779612 -73658868 + L2 LINE L2 3188 3270 -2 842 183 0 7 chr17 11779685 11779822 -73658658 + FRAM SINE Alu 16 151 -25 280 71 0 24 chr17 11779965 11780007 -73658473 + MER5B DNA MER1_type 18 58 -120 711 297 22 5 chr17 11780049 11780271 -73658209 - MIR SINE MIR -26 236 11 349 228 61 26 chr17 11782505 11782619 -73655861 + L1MC4a LINE L1 7480 7597 -211 612 266 78 56 chr17 11782969 11783707 -73654773 + L1ME3 LINE L1 902 1719 -4677 1854 110 0 8 chr17 11783769 11784050 -73654430 + AluSg SINE Alu 40 318 0 4565 281 87 20 chr17 11784318 11785503 -73652977 + L1ME3 LINE L1 2108 3212 -3003 2434 87 3 3 chr17 11785503 11785813 -73652667 + AluSp SINE Alu 1 310 -3 4565 281 87 20 chr17 11785813 11787219 -73651261 + L1ME3 LINE L1 3212 4834 -1381 1151 273 88 47 chr17 11787257 11788143 -73650337 + L1ME3 LINE L1 5080 6001 -230 253 157 0 57 chr17 11788173 11788243 -73650237 + (CATATA)n Simple_repeat Simple_repeat 3 68 0 2243 293 174 30 chr17 11788444 11789964 -73648516 - L2 LINE L2 -1481 1833 95 24 32 0 0 chr17 11790014 11790045 -73648435 + AT_rich Low_complexity Low_complexity 1 31 0 243 265 20 82 chr17 11790103 11790201 -73648279 - MIR3 SINE MIR -6 202 111 2222 196 34 69 chr17 11790327 11790879 -73647601 + MER74A LTR ERVL 26 558 0 2207 115 3 0 chr17 11791083 11791379 -73647101 + AluSp SINE Alu 1 297 -16 2277 116 0 0 chr17 11793399 11793701 -73644779 - AluSg SINE Alu -8 302 1 404 251 67 130 chr17 11794124 11794439 -73644041 + MLT1J2 LTR MaLR 2 296 -154 226 191 24 0 chr17 11795291 11795333 -73643147 - MLT1J2 LTR MaLR -154 296 254 291 28 0 0 chr17 11797777 11797813 -73640667 + (TC)n Simple_repeat Simple_repeat 1 36 0 236 347 46 46 chr17 11798580 11798776 -73639704 + L1ME2 LINE L1 140 335 -6061 2842 13 0 0 chr17 11799031 11799338 -73639142 + AluYa5 SINE Alu 1 307 -4 351 246 50 68 chr17 11799338 11799558 -73638922 + L1ME2 LINE L1 677 892 -5504 3225 246 60 61 chr17 11799670 11801463 -73637017 + L1ME2 LINE L1 1256 3010 -3205 1954 176 0 0 chr17 11801463 11801770 -73636710 + AluSx SINE Alu 1 307 -5 3225 246 60 61 chr17 11801770 11802156 -73636324 + L1ME2 LINE L1 3010 3395 -2820 3267 103 50 95 chr17 11802163 11802784 -73635696 - LTR14B LTR ERVK 0 608 16 4844 261 64 20 chr17 11802790 11805499 -73632981 + L1ME2 LINE L1 3406 6233 0 3724 82 4 4 chr17 11805649 11806158 -73632322 + L1PB1 LINE L1 5282 5790 -361 267 189 0 0 chr17 11806158 11806211 -73632269 + (TATATG)n Simple_repeat Simple_repeat 3 55 0 1796 63 0 0 chr17 11806211 11806432 -73632048 - L1PB1 LINE L1 -148 6003 5783 213 255 20 0 chr17 11806433 11806484 -73631996 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 306 0 0 0 chr17 11806700 11806734 -73631746 + (CA)n Simple_repeat Simple_repeat 2 35 0 2148 59 4 0 chr17 11806734 11807006 -73631474 + L1PB1 LINE L1 5793 6065 -86 530 272 97 67 chr17 11807212 11807407 -73631073 + MIR SINE MIR 62 262 0 195 136 51 0 chr17 11807641 11807700 -73630780 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 2781 13 0 3 chr17 11807707 11808012 -73630468 - AluY SINE Alu -7 304 1 195 204 0 0 chr17 11808151 11808195 -73630285 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 2670 46 0 0 chr17 11809501 11809805 -73628675 + AluY SINE Alu 1 304 -7 298 264 83 42 chr17 11810156 11810300 -73628180 + L2 LINE L2 3077 3226 -87 625 310 80 15 chr17 11812214 11812606 -73625874 + L1ME LINE L1 5282 5726 -395 552 203 123 18 chr17 11812606 11812769 -73625711 - MER104 DNA MER2_type 0 180 1 625 310 80 15 chr17 11812769 11812826 -73625654 + L1ME LINE L1 5726 5778 -343 2355 99 0 3 chr17 11812940 11813242 -73625238 - AluSp SINE Alu -12 301 1 917 182 144 0 chr17 11814085 11814272 -73624208 - MER20 DNA MER1_type -4 215 2 225 282 21 134 chr17 11814361 11814503 -73623977 + L2 LINE L2 3144 3269 -3 948 92 0 0 chr17 11814688 11814808 -73623672 + AluSp/q SINE Alu 176 295 -18 2292 100 3 0 chr17 11815155 11815454 -73623026 - AluSp SINE Alu -13 300 1 183 296 169 14 chr17 11815625 11815696 -73622784 - L2 LINE L2 -2 3270 3189 919 81 0 0 chr17 11815789 11815900 -73622580 + AluSp SINE Alu 23 133 -180 2502 84 0 0 chr17 11815907 11816218 -73622262 + AluY SINE Alu 1 311 0 235 323 151 35 chr17 11816403 11816747 -73621733 - L2 LINE L2 -410 2904 2521 2269 189 39 11 chr17 11817839 11818300 -73620180 + MER7C DNA MER2_type 1 474 -128 663 190 190 0 chr17 11818448 11818585 -73619895 + MER7C DNA MER2_type 441 603 0 22 0 0 0 chr17 11818640 11818662 -73619818 + AT_rich Low_complexity Low_complexity 1 22 0 2236 72 3 46 chr17 11819524 11819829 -73618651 - AluSq SINE Alu -21 292 1 736 247 153 33 chr17 11819978 11820330 -73618150 + LTR16A LTR ERVL 59 450 0 332 298 8 41 chr17 11820490 11820611 -73617869 + MIR SINE MIR 30 146 -62 366 302 44 28 chr17 11821162 11821344 -73617136 - MER5A DNA MER1_type -4 185 1 343 148 30 178 chr17 11822019 11822087 -73616393 - MER5B DNA MER1_type -62 116 76 1841 137 30 4 chr17 11822087 11822358 -73616122 - AluSq SINE Alu -35 278 1 343 148 30 178 chr17 11822358 11822424 -73616056 - MER5B DNA MER1_type -102 76 2 319 289 8 66 chr17 11822425 11822546 -73615934 + MIR SINE MIR 89 202 -60 348 281 93 29 chr17 11822640 11822779 -73615701 + Charlie8 DNA MER1_type 79 226 -2191 1881 208 83 88 chr17 11822859 11823401 -73615079 + MLT1E2 LTR MaLR 3 544 -82 2102 123 0 7 chr17 11823401 11823694 -73614786 + AluSg SINE Alu 1 291 -19 1881 208 83 88 chr17 11823694 11823754 -73614726 + MLT1E2 LTR MaLR 544 603 -23 209 289 66 33 chr17 11824094 11824215 -73614265 + L2 LINE L2 2936 3060 -212 256 208 0 19 chr17 11824386 11824439 -73614041 - L2 LINE L2 -3 3310 3259 1007 169 6 0 chr17 11824474 11824634 -73613846 - FRAM SINE Alu -5 161 1 205 156 0 0 chr17 11824759 11824791 -73613689 + MIR SINE MIR 220 251 -11 2187 85 7 27 chr17 11825782 11826105 -73612375 + AluSg1 SINE Alu 1 317 0 338 266 31 47 chr17 11826561 11826605 -73611875 + MER58C DNA MER1_type 75 118 -2302 1927 137 3 47 chr17 11826605 11826927 -73611553 + AluSx SINE Alu 1 308 -4 338 266 31 47 chr17 11826927 11827010 -73611470 + MER58C DNA MER1_type 118 200 -15 544 296 148 17 chr17 11828587 11828884 -73609596 - L3 LINE CR1 -59 1518 1183 457 143 66 0 chr17 11830028 11830119 -73608361 + MER53 DNA DNA 2 98 -91 1570 104 19 5 chr17 11830431 11830643 -73607837 - AluSg/x SINE Alu -16 296 82 1386 98 0 45 chr17 11831129 11831353 -73607127 - L1MA9 LINE L1 0 6312 6099 2021 65 0 15 chr17 11831354 11831616 -73606864 - L1PA8 LINE L1 0 6172 5915 2144 79 0 0 chr17 11831635 11831933 -73606547 - AluSc SINE Alu 0 298 1 1379 151 17 0 chr17 11831933 11832172 -73606308 - L1MA9 LINE L1 -203 6109 5867 2399 31 14 0 chr17 11832698 11832984 -73605496 + L1PA4 LINE L1 5866 6155 0 312 299 85 28 chr17 11833534 11833711 -73604769 + MIR SINE MIR 65 251 -11 315 270 191 62 chr17 11834957 11835198 -73603282 + L2 LINE L2 3042 3313 0 467 322 139 27 chr17 11835223 11835459 -73603021 + L3 LINE CR1 1119 1412 -165 300 200 40 0 chr17 11835459 11835534 -73602946 + MER116 DNA Mariner 3 80 0 467 322 139 27 chr17 11835534 11835663 -73602817 + L3 LINE CR1 1412 1525 -52 485 253 71 93 chr17 11835949 11836131 -73602349 + MIR SINE MIR 5 182 -80 189 0 0 0 chr17 11836988 11837009 -73601471 + (TG)n Simple_repeat Simple_repeat 1 21 0 233 143 0 20 chr17 11837323 11837372 -73601108 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 301 254 69 95 chr17 11837392 11837554 -73600926 + MIR SINE MIR 1 159 -103 2139 112 0 0 chr17 11837554 11837859 -73600621 - AluSx SINE Alu -7 305 1 301 254 69 95 chr17 11837859 11837885 -73600595 + MIR SINE MIR 159 184 -78 2291 106 0 0 chr17 11838812 11839123 -73599357 + AluSp SINE Alu 1 311 -2 2254 73 3 20 chr17 11839985 11840286 -73598194 - AluSg SINE Alu -14 296 1 243 246 33 0 chr17 11840437 11840498 -73597982 + L2 LINE L2 3242 3304 -9 2258 90 0 0 chr17 11840657 11840958 -73597522 - AluSg SINE Alu -9 301 1 2112 113 3 7 chr17 11841553 11841855 -73596625 - AluSg SINE Alu -9 301 1 1614 151 10 36 chr17 11841856 11842160 -73596320 - AluJb SINE Alu -16 296 1 269 261 115 48 chr17 11842659 11842824 -73595656 + MLT1K LTR MaLR 122 297 -291 466 213 40 47 chr17 11842998 11843148 -73595332 + MLT1K LTR MaLR 438 586 -2 328 274 189 55 chr17 11843181 11843382 -73595098 + MIR SINE MIR 35 262 0 2460 57 0 0 chr17 11843484 11843780 -73594700 - AluSc SINE Alu -13 296 1 402 216 22 147 chr17 11843931 11844162 -73594318 - MIR SINE MIR -59 203 2 377 335 91 36 chr17 11844981 11845202 -73593278 + MIR SINE MIR 23 255 -7 561 93 0 1 chr17 11845252 11845331 -73593149 - L1PA6 LINE L1 -174 5980 5910 535 45 0 0 chr17 11845331 11845390 -73593090 + L1PA5 LINE L1 6076 6141 -13 216 295 102 60 chr17 11845761 11845927 -73592553 - MIR SINE MIR -3 259 87 2024 122 0 13 chr17 11846480 11846783 -73591697 - AluSx SINE Alu -13 299 1 565 194 45 65 chr17 11846839 11846994 -73591486 + MER63 DNA MER1_type 1 778 -58 1516 178 18 96 chr17 11847134 11847528 -73590952 + MLT1A1 LTR MaLR 1 363 -2 552 237 23 28 chr17 11848255 11848432 -73590048 + MER113 DNA MER1_type? 9 184 -337 1830 108 56 14 chr17 11848460 11848746 -73589734 - AluSc SINE Alu -11 298 1 197 289 0 0 chr17 11850061 11850106 -73588374 - MIR SINE MIR -83 125 81 213 146 24 0 chr17 11851695 11851736 -73586744 + A-rich Low_complexity Low_complexity 2 43 0 637 360 23 13 chr17 11851998 11852298 -73586182 - L3 LINE CR1 -63 1514 1212 351 227 150 72 chr17 11853015 11853222 -73585258 + L1MEd LINE L1 59 281 -5838 2371 219 19 27 chr17 11854068 11854216 -73584264 + LTR53 LTR ERVL 1 149 -370 2212 106 0 10 chr17 11854216 11854528 -73583952 + AluSx SINE Alu 1 309 -3 2371 219 19 27 chr17 11854528 11854899 -73583581 + LTR53 LTR ERVL 149 516 -3 437 314 157 21 chr17 11855088 11855324 -73583156 + MLT1K LTR MaLR 208 475 -113 1904 84 4 8 chr17 11855384 11855647 -73582833 + AluSc SINE Alu 47 308 -1 282 337 59 10 chr17 11856076 11856177 -73582303 + L2 LINE L2 3167 3272 0 1634 140 11 21 chr17 11856284 11856608 -73581872 + AluJo SINE Alu 1 321 0 6085 266 102 34 chr17 11856624 11857764 -73580716 - L2 LINE L2 0 3313 2253 2100 111 0 3 chr17 11857764 11858061 -73580419 + AluSg SINE Alu 1 296 -14 6085 266 102 34 chr17 11858061 11859731 -73578749 - L2 LINE L2 -1060 2253 297 206 367 61 0 chr17 11859750 11859848 -73578632 - MIR SINE MIR 0 262 159 312 211 0 0 chr17 11860692 11860763 -73577717 + CT-rich Low_complexity Low_complexity 4 74 0 1749 193 76 36 chr17 11860832 11861282 -73577198 + L1MB1 LINE L1 5701 6168 0 871 158 0 0 chr17 11861304 11861431 -73577049 + FLAM_C SINE Alu 1 127 -6 497 223 28 2 chr17 11861438 11861576 -73576904 - L1ME1 LINE L1 -334 5832 5689 229 351 79 12 chr17 11861650 11861815 -73576665 + L2 LINE L2 2889 3064 -208 726 169 174 0 chr17 11864067 11864245 -73574235 + MER3 DNA MER1_type 1 209 0 1598 174 14 4 chr17 11864357 11864638 -73573842 - AluJo SINE Alu -22 290 7 2829 191 11 15 chr17 11865783 11866327 -73572153 - MLT1F LTR MaLR 0 542 1 453 280 31 34 chr17 11866875 11867144 -73571336 + L1ME3A LINE L1 5676 5945 -219 324 236 121 80 chr17 11867206 11867369 -73571111 + L1ME3A LINE L1 5963 6137 -33 4306 117 11 3 chr17 11867369 11867976 -73570504 - LTR9 LTR ERV1 0 612 1 324 236 121 80 chr17 11867976 11868011 -73570469 + L1ME3A LINE L1 6137 6169 -1 1322 149 4 26 chr17 11868266 11868494 -73569986 - AluSx SINE Alu -89 223 1 262 236 0 0 chr17 11868504 11868559 -73569921 - HAL1b LINE L1 -916 432 378 2571 158 209 24 chr17 11869760 11870374 -73568106 + LTR8A LTR ERV1 1 727 0 2092 124 72 26 chr17 11870466 11870814 -73567666 + THE1B LTR MaLR 1 364 0 452 216 78 9 chr17 11870869 11870985 -73567495 - MLT2E LTR ERVL 0 628 505 494 221 39 44 chr17 11871196 11871377 -73567103 - MER53 DNA DNA -9 180 1 1548 183 9 56 chr17 11871560 11871883 -73566597 - MLT1B LTR MaLR 0 390 83 1472 186 11 11 chr17 11872165 11872445 -73566035 + LTR4 LTR ERV1 317 596 0 247 171 24 110 chr17 11872446 11872485 -73565995 - MLT1B LTR MaLR -305 85 55 4073 177 40 25 chr17 11872485 11873125 -73565355 - LTR39 LTR ERV1 0 783 128 2239 91 0 3 chr17 11873125 11873422 -73565058 - AluY SINE Alu -15 296 1 4073 177 40 25 chr17 11873422 11873550 -73564930 - LTR39 LTR ERV1 -655 128 3 247 171 24 110 chr17 11873550 11873592 -73564888 - MLT1B LTR MaLR -335 55 11 1435 214 148 30 chr17 11873653 11874153 -73564327 - MER89 LTR ERV1 0 559 1 1018 234 9 22 chr17 11874413 11874639 -73563841 + MER58A DNA MER1_type 1 223 -1 1060 288 52 57 chr17 11874752 11875173 -73563307 + MLT1K LTR MaLR 33 452 -136 1980 112 35 0 chr17 11875173 11875460 -73563020 - AluY SINE Alu -14 297 1 1060 288 52 57 chr17 11875460 11875580 -73562900 + MLT1K LTR MaLR 452 571 -17 554 311 12 12 chr17 11876471 11876638 -73561842 + MER5B DNA MER1_type 3 169 -9 752 199 39 11 chr17 11877102 11877283 -73561197 + MER5A DNA MER1_type 1 186 -3 1717 155 28 34 chr17 11877446 11877769 -73560711 - MER89 LTR ERV1 -1 558 238 1291 183 8 8 chr17 11877770 11878010 -73560470 + MLT2B1 LTR ERVL 1 240 -280 242 246 31 0 chr17 11878023 11878088 -73560392 + MER52A LTR ERV1 1 67 -1688 5666 188 80 42 chr17 11878653 11879962 -73558518 + MER52A LTR ERV1 319 1755 0 775 217 6 19 chr17 11879962 11880113 -73558367 + MLT2B3 LTR ERVL 240 388 -166 1758 156 0 0 chr17 11880113 11880370 -73558110 - ERVL LTR ERVL -878 4886 4630 714 169 0 24 chr17 11880372 11880496 -73557984 + MLT1A1 LTR MaLR 211 331 -34 * 1878 207 31 3 chr17 11880474 11880827 -73557653 - MLT2B2 LTR ERVL -152 363 1 550 196 0 6 chr17 11880827 11880970 -73557510 - MER89 LTR ERV1 -318 241 1 718 228 24 24 chr17 11881676 11881843 -73556637 + MLT2B1 LTR ERVL 1 167 -353 22 0 0 0 chr17 11882059 11882081 -73556399 + AT_rich Low_complexity Low_complexity 1 22 0 361 322 69 23 chr17 11882577 11882838 -73555642 - L2 LINE L2 -123 3190 2918 1070 87 0 27 chr17 11882853 11883003 -73555477 + AluSg/x SINE Alu 167 312 0 499 301 130 16 chr17 11883013 11883329 -73555151 - L2 LINE L2 -410 2904 2553 2276 114 3 0 chr17 11883368 11883667 -73554813 + AluSp SINE Alu 1 300 -13 21 0 0 0 chr17 11884468 11884489 -73553991 + AT_rich Low_complexity Low_complexity 1 21 0 419 213 66 33 chr17 11885299 11885421 -73553059 + MIR SINE MIR 97 222 -40 2442 92 0 0 chr17 11886196 11886502 -73551978 + AluSg SINE Alu 2 307 -3 499 311 196 3 chr17 11886830 11887171 -73551309 + L2 LINE L2 1146 1552 -1762 2193 124 3 7 chr17 11887258 11887564 -73550916 + AluSx SINE Alu 1 305 -7 302 372 88 20 chr17 11887615 11887737 -73550743 + L2 LINE L2 1802 1914 -1400 1532 59 5 30 chr17 11887737 11887939 -73550541 - MER107 DNA MER1_type 0 197 1 302 372 88 20 chr17 11887939 11888157 -73550323 + L2 LINE L2 1914 2165 -1149 429 339 43 5 chr17 11888559 11888745 -73549735 - MIR3 SINE MIR -14 194 2 226 316 61 35 chr17 11890336 11890450 -73548030 - MIR SINE MIR -63 145 29 244 157 214 0 chr17 11890883 11890953 -73547527 - MIR SINE MIR -73 189 105 220 307 68 0 chr17 11891004 11891092 -73547388 - L2 LINE L2 -408 2905 2812 466 209 144 7 chr17 11891126 11891265 -73547215 - MIR SINE MIR 0 262 105 2453 157 2 15 chr17 11891687 11892095 -73546385 - MER57A LTR ERV1 0 403 1 2449 97 14 8 chr17 11892292 11892643 -73545837 + THE1A LTR MaLR 3 355 0 661 248 75 75 chr17 11892983 11893290 -73545190 - L1ME3A LINE L1 -4 6235 5929 4112 255 79 37 chr17 11893332 11895440 -73543040 - L1MEc LINE L1 -1945 4270 2111 515 277 83 25 chr17 11895637 11895915 -73542565 - L1MEc LINE L1 -4561 1835 1542 1911 151 3 7 chr17 11896076 11896361 -73542119 + AluSx SINE Alu 4 287 -25 2226 95 28 0 chr17 11896643 11896928 -73541552 + AluSp SINE Alu 1 293 -20 256 299 95 14 chr17 11897490 11897637 -73540843 + MIR SINE MIR 69 227 -35 342 272 39 10 chr17 11897791 11897894 -73540586 - MIR SINE MIR -87 175 70 250 263 0 0 chr17 11898489 11898546 -73539934 - L3 LINE CR1 -5 1572 1516 2411 62 0 55 chr17 11898680 11899005 -73539475 - AluY SINE Alu -4 307 1 414 274 104 52 chr17 11899103 11899373 -73539107 - L3 LINE CR1 -298 1279 996 1706 40 0 0 chr17 11899523 11899724 -73538756 + L1PA5 LINE L1 5948 6148 -6 2236 105 3 7 chr17 11902795 11903101 -73535379 + AluSg SINE Alu 1 305 -5 201 39 0 0 chr17 11903101 11903127 -73535353 + (GA)n Simple_repeat Simple_repeat 2 27 0 949 285 93 118 chr17 11903184 11903998 -73534482 + L2 LINE L2 124 957 -2357 207 0 0 0 chr17 11903998 11904021 -73534459 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 760 91 0 0 chr17 11904023 11904122 -73534358 - AluSg/x SINE Alu -25 285 187 949 285 93 118 chr17 11904122 11904227 -73534253 + L2 LINE L2 958 1064 -2250 2098 120 10 3 chr17 11904227 11904528 -73533952 - AluSx SINE Alu -9 303 1 949 285 93 118 chr17 11904528 11905272 -73533208 + L2 LINE L2 1064 1845 -1469 205 239 0 0 chr17 11905477 11905523 -73532957 + L2 LINE L2 3207 3252 -20 218 315 63 16 chr17 11905529 11905656 -73532824 - L2 LINE L2 -160 3153 3021 677 241 74 19 chr17 11905684 11905900 -73532580 - MIR SINE MIR -29 233 6 338 277 71 18 chr17 11905920 11906032 -73532448 + L2 LINE L2 3137 3254 -18 2350 80 7 10 chr17 11906052 11906352 -73532128 + AluSq SINE Alu 2 300 -13 592 301 63 33 chr17 11906426 11906761 -73531719 - MARNA DNA Mariner -217 369 25 2221 115 0 13 chr17 11906993 11907306 -73531174 + AluSq SINE Alu 5 313 0 407 314 83 0 chr17 11907542 11907698 -73530782 + MIR SINE MIR 9 177 -85 189 0 0 0 chr17 11908023 11908044 -73530436 + (TG)n Simple_repeat Simple_repeat 1 21 0 253 269 103 21 chr17 11909094 11909239 -73529241 + L1ME4a LINE L1 5318 5474 -647 2284 78 14 0 chr17 11909240 11909533 -73528947 + AluY SINE Alu 1 297 -14 986 151 0 42 chr17 11909544 11909710 -73528770 + AluSg/x SINE Alu 137 295 -17 2074 124 6 22 chr17 11910179 11910494 -73527986 - AluSx SINE Alu 0 312 3 836 113 0 0 chr17 11910560 11910675 -73527805 - AluJb SINE Alu -197 115 1 533 251 60 95 chr17 11910915 11911285 -73527195 + L1ME4a LINE L1 5595 5951 -170 760 182 53 18 chr17 11913363 11913533 -73524947 - MER5B DNA MER1_type -2 176 1 2267 104 0 7 chr17 11913927 11914236 -73524244 + AluY SINE Alu 1 307 -4 2251 96 0 10 chr17 11915689 11915980 -73522500 + AluSx SINE Alu 16 303 -9 1190 102 0 0 chr17 11916506 11916663 -73521817 + AluSg/x SINE Alu 156 312 0 303 140 0 0 chr17 11916670 11916720 -73521760 + (TA)n Simple_repeat Simple_repeat 2 51 0 211 203 0 51 chr17 11919172 11919231 -73519249 - L2 LINE L2 0 3272 3217 1789 190 0 0 chr17 11920150 11920460 -73518020 + AluJb SINE Alu 1 310 -2 1574 68 16 0 chr17 11921518 11921710 -73516770 + AluY SINE Alu 98 292 -19 1067 208 28 0 chr17 11922084 11922300 -73516180 - MER58B DNA MER1_type -3 338 117 2429 97 0 0 chr17 11922792 11923100 -73515380 + AluSc SINE Alu 1 308 -1 303 28 0 0 chr17 11923521 11923557 -73514923 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1227 112 0 6 chr17 11924069 11924230 -73514250 - AluSc SINE Alu -20 289 130 439 86 0 0 chr17 11924230 11924288 -73514192 - AluSg1 SINE Alu -216 93 36 245 289 72 30 chr17 11924316 11924482 -73513998 + L1M4 LINE L1 4640 4812 -1334 405 309 143 21 chr17 11924486 11925004 -73513476 - L1M4 LINE L1 -1891 4255 3675 321 281 79 9 chr17 11925000 11925114 -73513366 - L1MC/D LINE L1 -2303 5505 5384 * 476 259 16 32 chr17 11925139 11925328 -73513152 - L1MC/D LINE L1 -2361 5447 5262 2385 94 0 13 chr17 11925643 11925951 -73512529 + AluSq SINE Alu 1 304 -9 2373 97 0 3 chr17 11928293 11928602 -73509878 + AluSc SINE Alu 1 308 -1 453 145 0 0 chr17 11929509 11929585 -73508895 + (TTCTCC)n Simple_repeat Simple_repeat 4 79 0 343 304 102 31 chr17 11930311 11930715 -73507765 - MER41B LTR ERV1 -62 450 148 217 346 20 10 chr17 11930948 11931049 -73507431 + L2 LINE L2 2397 2498 -816 2505 57 6 19 chr17 11931090 11931405 -73507075 - AluY SINE Alu 0 311 1 2369 110 0 0 chr17 11931460 11931768 -73506712 - AluSx SINE Alu -4 308 1 2214 205 22 5 chr17 11931878 11932293 -73506187 - MSTA LTR MaLR -6 422 1 938 227 21 65 chr17 11932299 11932328 -73506152 + L2 LINE L2 2439 2468 -846 1960 98 0 0 chr17 11932328 11932574 -73505906 - AluSx SINE Alu -11 301 56 938 227 21 65 chr17 11932574 11932835 -73505645 + L2 LINE L2 2468 2716 -598 229 170 0 64 chr17 11932823 11932835 -73505645 + Alu SINE Alu 127 135 -167 2351 95 3 0 chr17 11932835 11933131 -73505349 + AluSq SINE Alu 1 297 -16 277 140 20 0 chr17 11933132 11933182 -73505298 + L2 LINE L2 3263 3313 0 182 236 55 18 chr17 11933563 11933618 -73504862 + L2 LINE L2 3216 3272 0 2060 126 0 3 chr17 11934093 11934416 -73504064 - AluSx SINE Alu 0 322 1 297 289 20 92 chr17 11935304 11935456 -73503024 - MLT1K LTR MaLR -8 580 440 287 302 184 11 chr17 11935474 11935653 -73502827 - MLT1K LTR MaLR -369 219 10 2683 134 16 19 chr17 11935771 11936204 -73502276 - MSTB1 LTR MaLR 0 432 1 874 142 123 0 chr17 11937584 11937739 -73500741 - MER5A DNA MER1_type 0 189 16 2647 187 71 4 chr17 11937958 11938482 -73499998 - MER89 LTR ERV1 0 559 1 2273 131 0 0 chr17 11938690 11939002 -73499478 + AluSx SINE Alu 1 312 0 357 369 23 11 chr17 11939747 11939923 -73498557 - MIR3 SINE MIR -16 192 15 22 0 0 0 chr17 11940982 11941004 -73497476 + AT_rich Low_complexity Low_complexity 1 22 0 426 305 35 7 chr17 11941523 11941664 -73496816 + MIR SINE MIR 42 186 -76 215 208 0 42 chr17 11941926 11941974 -73496506 - L2 LINE L2 -18 3254 3209 1468 292 44 8 chr17 11942087 11942626 -73495854 + L2 LINE L2 2482 3039 -274 843 263 178 2 chr17 11942627 11943042 -73495438 + HAL1 LINE L1 2020 2507 0 2640 43 0 0 chr17 11943878 11944178 -73494302 + AluY SINE Alu 1 300 -11 858 176 48 6 chr17 11944389 11944554 -73493926 - L1MA9 LINE L1 -38 6274 6103 * 1754 195 151 5 chr17 11944551 11944941 -73493539 + L1MA8 LINE L1 5489 5935 -356 1996 189 103 13 chr17 11945181 11945637 -73492843 + MLT1D LTR MaLR 3 499 -6 2747 131 72 84 chr17 11945853 11946516 -73491964 - MER4A LTR ERV1 -9 655 1 1958 166 34 53 chr17 11947024 11947581 -73490899 - MLT2A2 LTR ERVL 0 554 1 310 265 0 0 chr17 11947582 11947665 -73490815 + L1ME4a LINE L1 3896 3978 -2168 328 295 110 18 chr17 11947991 11948218 -73490262 + L1ME4a LINE L1 4370 4617 -1529 359 269 106 24 chr17 11948278 11948486 -73489994 + L1ME4a LINE L1 5735 5959 -162 198 0 0 0 chr17 11948486 11948508 -73489972 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 264 59 0 0 chr17 11948507 11948541 -73489939 + (TA)n Simple_repeat Simple_repeat 1 34 0 2154 108 0 4 chr17 11949070 11949348 -73489132 - AluSg SINE Alu -33 277 1 752 83 8 75 chr17 11949355 11949488 -73488992 - L1PA13 LINE L1 -2 6161 6038 3381 120 21 53 chr17 11949490 11949647 -73488833 - L1PA13 LINE L1 -715 5459 5298 11177 20 3 1 chr17 11949647 11951695 -73486785 - L1PA3 LINE L1 0 6155 4106 3381 120 21 53 chr17 11951695 11952244 -73486236 - L1PA13 LINE L1 -876 5298 4770 443 301 24 43 chr17 11952356 11952565 -73485915 + LTR33 LTR ERVL 12 216 -305 273 304 9 0 chr17 11952859 11952971 -73485509 + L1P LINE L1 5293 5405 -763 23 0 0 0 chr17 11953046 11953069 -73485411 + AT_rich Low_complexity Low_complexity 1 23 0 231 183 37 24 chr17 11953146 11953228 -73485252 + (TTAA)n Simple_repeat Simple_repeat 1 83 0 349 316 63 15 chr17 11953228 11953434 -73485046 + L1ME LINE L1 5578 5793 -328 785 281 108 33 chr17 11953471 11953487 -73484993 + L2 LINE L2 2475 2488 -825 2531 58 0 0 chr17 11953487 11953779 -73484701 - AluY SINE Alu -19 292 1 785 281 108 33 chr17 11953779 11954532 -73483948 + L2 LINE L2 2488 3307 -6 541 296 80 75 chr17 11954557 11954946 -73483534 - L2 LINE L2 0 3313 2923 2166 116 3 10 chr17 11955010 11955311 -73483169 + AluSx SINE Alu 1 299 -13 313 358 142 21 chr17 11955473 11955732 -73482748 - L2 LINE L2 0 3313 3087 2006 124 3 24 chr17 11955732 11956060 -73482420 - AluSq SINE Alu 0 322 1 313 358 142 21 chr17 11956060 11956235 -73482245 - L2 LINE L2 -226 3087 2825 300 303 81 25 chr17 11956270 11956468 -73482012 + MLT1K LTR MaLR 377 585 -3 3057 187 75 67 chr17 11956925 11957458 -73481022 + MER54B LTR ERVL 3 546 -355 426 94 0 0 chr17 11957458 11957522 -73480958 + (TA)n Simple_repeat Simple_repeat 1 64 0 3057 187 75 67 chr17 11957522 11957882 -73480598 + MER54B LTR ERVL 546 901 0 186 317 17 0 chr17 11957981 11958041 -73480439 - MIR SINE MIR -61 147 87 380 286 71 7 chr17 11959158 11959298 -73479182 - Charlie8 DNA MER1_type -2268 149 1 3134 107 169 18 chr17 11959675 11959710 -73478770 - LTR24C LTR ERV1 0 635 607 920 118 0 15 chr17 11959710 11959845 -73478635 - FLAM_C SINE Alu 0 133 1 3134 107 169 18 chr17 11959845 11960361 -73478119 - LTR24C LTR ERV1 -28 607 1 473 365 40 0 chr17 11960432 11960654 -73477826 + MIR SINE MIR 6 236 -26 2146 112 0 23 chr17 11961061 11961365 -73477115 + AluY SINE Alu 1 297 -14 755 153 0 76 chr17 11961524 11961668 -73476812 - FLAM_C SINE Alu 0 133 1 2234 153 75 5 chr17 11962286 11962684 -73475796 + MSTA LTR MaLR 3 428 0 275 208 131 39 chr17 11962688 11962818 -73475662 + L1ME4a LINE L1 5980 6121 0 430 278 142 19 chr17 11962983 11963188 -73475292 + Charlie8 DNA MER1_type 36 265 -2152 351 134 0 175 chr17 11963401 11963446 -73475034 + MADE1 DNA Mariner 1 52 -28 2139 122 7 3 chr17 11963446 11963749 -73474731 + AluSq SINE Alu 1 304 -9 351 134 0 175 chr17 11963749 11963774 -73474706 + MADE1 DNA Mariner 52 52 -28 2268 116 3 0 chr17 11963774 11964076 -73474404 + AluSx SINE Alu 1 303 -9 351 134 0 175 chr17 11964076 11964101 -73474379 + MADE1 DNA Mariner 52 80 0 2737 135 29 0 chr17 11964172 11964586 -73473894 - MSTB LTR MaLR 0 426 1 225 203 32 114 chr17 11964594 11964717 -73473763 - HAL1b LINE L1 -490 858 746 423 298 18 75 chr17 11964995 11965197 -73473283 - HAL1 LINE L1 -780 1727 1556 2365 88 10 0 chr17 11965197 11965504 -73472976 - AluSp SINE Alu -3 310 1 423 298 18 75 chr17 11965504 11965687 -73472793 - HAL1 LINE L1 -951 1556 1364 * 45566 33 3 1 chr17 11965669 11971816 -73466664 - L1PA3 LINE L1 0 6155 2 790 269 84 44 chr17 11971841 11972391 -73466089 - HAL1 LINE L1 -1172 1335 764 257 320 50 10 chr17 11972785 11972885 -73465595 - HAL1 LINE L1 -2399 108 5 1676 266 79 19 chr17 11974412 11974930 -73463550 - MLT1H1 LTR MaLR 0 555 7 227 360 34 34 chr17 11975428 11975603 -73462877 + MIR3 SINE MIR 33 207 -1 193 318 12 0 chr17 11975905 11975990 -73462490 - MIR SINE MIR -36 226 141 2620 47 0 0 chr17 11977282 11977583 -73460897 + AluY SINE Alu 1 301 -10 732 201 14 0 chr17 11977912 11978051 -73460429 - Charlie4 DNA MER1_type -3 1958 1818 1464 193 42 3 chr17 11978245 11978556 -73459924 + L1MB5 LINE L1 5852 6174 0 2239 117 0 0 chr17 11978606 11978906 -73459574 + AluSx SINE Alu 1 300 -12 233 292 121 21 chr17 11980026 11980266 -73458214 - L3 LINE CR1 -37 1540 1277 217 313 0 0 chr17 11980688 11980752 -73457728 - MIR SINE MIR -110 152 89 1596 147 65 187 chr17 11980775 11980909 -73457571 + L1MB3 LINE L1 5680 5829 -354 973 122 45 0 chr17 11980909 11981065 -73457415 + L1MA2 LINE L1 6142 6304 0 1596 147 65 187 chr17 11981065 11981351 -73457129 + L1MB3 LINE L1 5829 6031 -152 2090 78 28 28 chr17 11981351 11981661 -73456819 - AluSg SINE Alu 0 310 1 1596 147 65 187 chr17 11981661 11981795 -73456685 + L1MB3 LINE L1 6031 6180 -3 21 36 0 0 chr17 11981795 11981823 -73456657 + AT_rich Low_complexity Low_complexity 1 28 0 2420 99 0 3 chr17 11981834 11982147 -73456333 + AluSq SINE Alu 1 312 -1 1837 102 8 4 chr17 11982433 11982677 -73455803 - AluSx SINE Alu -67 245 1 320 271 24 0 chr17 11982797 11982882 -73455598 + L2 LINE L2 3223 3309 -4 1712 152 7 52 chr17 11983171 11983184 -73455296 - AluJb SINE Alu 0 312 300 256 31 0 0 chr17 11983184 11983216 -73455264 + (TTTG)n Simple_repeat Simple_repeat 2 176 0 1712 152 7 52 chr17 11983216 11983511 -73454969 - AluJb SINE Alu -12 300 1 26 0 0 0 chr17 11983681 11983707 -73454773 + AT_rich Low_complexity Low_complexity 1 26 0 257 257 169 35 chr17 11984223 11984566 -73453914 + L1ME4a LINE L1 5716 6104 -17 510 275 88 6 chr17 11985494 11985665 -73452815 - MER91B DNA MER1_type -5 185 1 2184 112 3 16 chr17 11986270 11986573 -73451907 + AluSg SINE Alu 1 299 -11 1240 209 200 0 chr17 11986719 11987044 -73451436 - MLT1B LTR MaLR 0 390 1 971 279 91 17 chr17 11987170 11987579 -73450901 - L2 LINE L2 0 3313 2875 208 320 0 0 chr17 11989592 11989642 -73448838 - L2 LINE L2 -10 3262 3213 202 403 59 21 chr17 11989693 11989879 -73448601 - L2 LINE L2 0 3272 3080 470 260 59 35 chr17 11990092 11990346 -73448134 - L1MEd LINE L1 -5037 1082 823 2334 72 3 3 chr17 11990684 11991001 -73447479 + AluSq SINE Alu 1 313 0 309 68 0 0 chr17 11992366 11992410 -73446070 + (CA)n Simple_repeat Simple_repeat 1 44 0 2412 66 3 7 chr17 11992625 11992926 -73445554 - AluY SINE Alu -11 300 1 897 241 61 13 chr17 11993923 11994234 -73444246 + MER102a DNA MER1_type 5 330 0 230 266 31 0 chr17 11994290 11994354 -73444126 - L2 LINE L2 -2 3311 3246 1632 161 77 11 chr17 11995294 11995630 -73442850 - AluJo SINE Alu 0 355 1 2060 147 10 0 chr17 11996001 11996308 -73442172 - AluSx SINE Alu -2 310 1 560 250 31 0 chr17 11996774 11996902 -73441578 - MER117 DNA MER1_type -49 148 17 2167 117 0 10 chr17 11997199 11997497 -73440983 - AluSx SINE Alu -17 295 1 421 75 0 0 chr17 11997596 11997649 -73440831 - tRNA-Arg-CGC tRNA tRNA -23 53 1 3849 52 10 20 chr17 11998034 11998535 -73439945 + L1PA8 LINE L1 5677 6172 0 234 258 45 22 chr17 11999613 11999702 -73438778 - MIR SINE MIR -49 213 123 1711 184 66 8 chr17 12000115 12000495 -73437985 - L1MD1 LINE L1 0 6242 5841 276 291 7 68 chr17 12000499 12000647 -73437833 + MARNA DNA Mariner 45 183 -403 240 200 0 0 chr17 12000673 12000718 -73437762 - MER58A DNA MER1_type 0 224 180 937 196 58 27 chr17 12000720 12000944 -73437536 - MLT1B LTR MaLR -159 231 1 832 165 133 6 chr17 12000958 12001116 -73437364 - MER58A DNA MER1_type -46 178 1 1433 167 75 35 chr17 12001359 12001452 -73437028 - Charlie5 DNA MER1_type -1 2623 2535 1981 129 14 0 chr17 12001452 12001738 -73436742 + AluSq SINE Alu 1 290 -23 1433 167 75 35 chr17 12001738 12002015 -73436465 - Charlie5 DNA MER1_type -89 2535 2238 545 208 0 0 chr17 12002044 12002145 -73436335 - Charlie5 DNA MER1_type -2506 106 6 397 264 101 44 chr17 12002271 12002430 -73436050 + MIR SINE MIR 23 190 -72 1555 204 57 64 chr17 12002463 12002758 -73435722 - MLT1C LTR MaLR 0 467 175 2392 88 7 0 chr17 12002758 12003064 -73435416 - AluSc SINE Alu -1 308 1 1555 204 57 64 chr17 12003064 12003238 -73435242 - MLT1C LTR MaLR -292 175 1 209 149 43 0 chr17 12003524 12003571 -73434909 + (CTTTG)n Simple_repeat Simple_repeat 1 49 0 23 0 0 0 chr17 12003820 12003843 -73434637 + AT_rich Low_complexity Low_complexity 1 23 0 334 258 83 33 chr17 12004489 12004609 -73433871 - L2 LINE L2 -19 3253 3128 207 100 0 75 chr17 12005339 12005379 -73433101 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1553 202 91 33 chr17 12005545 12005941 -73432539 - LTR52 LTR ERVL 0 421 3 1390 111 16 74 chr17 12005971 12006057 -73432423 + MER30 DNA MER1_type 1 90 -140 2206 107 0 0 chr17 12006057 12006358 -73432122 + AluSx SINE Alu 1 301 0 1390 111 16 74 chr17 12006358 12006514 -73431966 + MER30 DNA MER1_type 90 230 0 189 237 79 13 chr17 12006940 12007016 -73431464 - L2 LINE L2 -769 2545 2465 2380 98 0 0 chr17 12007702 12008009 -73430471 + AluSg1 SINE Alu 1 307 -2 542 218 15 15 chr17 12008045 12008178 -73430302 + L1MB8 LINE L1 6040 6172 -6 2194 117 7 7 chr17 12008274 12008582 -73429898 + AluSx SINE Alu 3 310 -2 434 335 165 32 chr17 12008623 12008992 -73429488 - L2 LINE L2 -2369 945 626 2459 83 0 6 chr17 12008992 12009304 -73429176 + AluSg SINE Alu 1 310 0 434 335 165 32 chr17 12009304 12009523 -73428957 - L2 LINE L2 -2688 626 279 2306 92 0 7 chr17 12009595 12009899 -73428581 + AluSc SINE Alu 1 302 -7 280 302 23 0 chr17 12010154 12010240 -73428240 + MIR SINE MIR 41 128 -80 4002 89 30 27 chr17 12010772 12010988 -73427492 + L1PA11 LINE L1 5575 5789 -385 2376 108 0 0 chr17 12010988 12011295 -73427185 + AluSq SINE Alu 1 307 -6 4002 89 30 27 chr17 12011295 12011676 -73426804 + L1PA11 LINE L1 5789 6174 0 1911 100 38 14 chr17 12011719 12011832 -73426648 - MER4B LTR ERV1 -314 296 187 2125 103 35 0 chr17 12011832 12012114 -73426366 + AluSp SINE Alu 1 292 -21 1911 100 38 14 chr17 12012114 12012289 -73426191 - MER4B LTR ERV1 -423 187 1 293 269 0 0 chr17 12012641 12012708 -73425772 + MER74B LTR ERVL 1 67 -555 758 167 8 24 chr17 12012792 12012918 -73425562 + MER8 DNA MER2_type 116 239 0 534 184 0 0 chr17 12012950 12013048 -73425432 - L1MA5A LINE L1 -4 6293 6196 4111 133 74 1 chr17 12013048 12013697 -73424783 - LTR62 LTR ERVK -5 714 19 682 97 0 10 chr17 12013705 12013808 -73424672 - L1MA5A LINE L1 -94 6203 6102 1946 249 34 15 chr17 12013808 12014331 -73424149 + MER74B LTR ERVL 80 612 -10 6127 206 46 51 chr17 12014377 12014618 -73423862 - L1MB8 LINE L1 0 6178 5937 2472 65 3 0 chr17 12014618 12014911 -73423569 + AluY SINE Alu 1 294 -17 6127 206 46 51 chr17 12014911 12016666 -73421814 - L1MB8 LINE L1 -241 5937 4175 2046 92 4 8 chr17 12016666 12016928 -73421552 - AluSc SINE Alu -16 293 33 6127 206 46 51 chr17 12016928 12017529 -73420951 - L1MB8 LINE L1 -2003 4175 3595 2281 119 0 0 chr17 12017529 12017824 -73420656 + AluSx SINE Alu 1 295 -17 6127 206 46 51 chr17 12017824 12018049 -73420431 - L1MB8 LINE L1 -2583 3595 3370 2605 68 0 0 chr17 12018146 12018455 -73420025 + AluY SINE Alu 3 311 0 876 285 123 36 chr17 12018972 12019547 -73418933 - HAL1 LINE L1 -586 1921 1297 736 303 72 18 chr17 12019554 12019887 -73418593 + L2 LINE L2 2406 2756 -558 2152 108 7 0 chr17 12019887 12020209 -73418271 + AluSc SINE Alu 1 309 0 245 295 13 13 chr17 12021673 12021751 -73416729 + GA-rich Low_complexity Low_complexity 1 78 0 2425 89 0 9 chr17 12021785 12022100 -73416380 - AluSq SINE Alu -1 312 1 1768 161 7 4 chr17 12022849 12023174 -73415306 - AluJb SINE Alu 0 326 1 2273 95 3 7 chr17 12023347 12023641 -73414839 + AluSx SINE Alu 1 293 -19 2709 49 0 0 chr17 12023857 12024165 -73414315 + AluY SINE Alu 1 308 -3 2166 96 3 7 chr17 12024672 12024954 -73413526 - AluSp SINE Alu -7 306 26 2473 106 0 0 chr17 12024982 12025294 -73413186 + AluSx SINE Alu 1 312 0 2007 115 0 0 chr17 12025502 12025762 -73412718 + AluSq SINE Alu 1 260 -53 833 105 0 0 chr17 12025762 12025867 -73412613 + AluSg/x SINE Alu 157 261 -49 2178 77 0 15 chr17 12027696 12028011 -73410469 - AluSq SINE Alu 0 323 13 2013 73 0 0 chr17 12028011 12028254 -73410226 - AluYb8 SINE Alu -73 245 1 2503 88 0 0 chr17 12029260 12029567 -73408913 - AluSx SINE Alu -5 307 1 243 0 0 0 chr17 12030679 12030706 -73407774 + (A)n Simple_repeat Simple_repeat 1 27 0 319 241 135 15 chr17 12030743 12030876 -73407604 - MER103 DNA DNA -10 156 8 6909 76 9 3 chr17 12030885 12032219 -73406261 - L1PA11 LINE L1 0 6174 4834 468 51 0 0 chr17 12032735 12032794 -73405686 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 883 134 0 0 chr17 12032795 12032914 -73405566 - AluSq/x SINE Alu -194 119 1 376 280 11 0 chr17 12033499 12033592 -73404888 - MER5A DNA MER1_type -85 104 11 2635 62 0 0 chr17 12033668 12033977 -73404503 - AluY SINE Alu -2 309 1 972 176 6 0 chr17 12033986 12034162 -73404318 + MER5A DNA MER1_type 8 184 -5 470 120 60 40 chr17 12034297 12034397 -73404083 + L1MB3 LINE L1 6080 6181 -2 484 104 0 0 chr17 12035215 12035282 -73403198 + MER5A DNA MER1_type 9 75 -114 1191 70 0 0 chr17 12035283 12035426 -73403054 + AluY SINE Alu 157 299 -12 466 152 181 0 chr17 12035427 12035532 -73402948 + MER5A DNA MER1_type 66 189 0 237 281 56 11 chr17 12035750 12035839 -73402641 - MLT1E LTR MaLR -500 93 1 198 253 58 23 chr17 12036917 12037004 -73401476 + MER5A DNA MER1_type 97 186 -3 * 524 151 0 0 chr17 12036928 12037014 -73401466 - MER5A DNA MER1_type -96 93 8 398 237 11 0 chr17 12037088 12037181 -73401299 + MER5A DNA MER1_type 11 104 -85 2546 72 3 0 chr17 12038018 12038323 -73400157 - AluSp SINE Alu -7 306 1 2595 38 0 22 chr17 12039079 12039395 -73399085 - AluY SINE Alu -2 309 1 2207 97 13 7 chr17 12039605 12039905 -73398575 - AluSx SINE Alu -10 302 1 2575 63 0 0 chr17 12040017 12040317 -73398163 - AluSg SINE Alu -10 300 1 1414 193 7 48 chr17 12040991 12041286 -73397194 + AluJb SINE Alu 1 283 -29 198 0 0 0 chr17 12041295 12041317 -73397163 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 2292 73 10 3 chr17 12042836 12043124 -73395356 + AluSg SINE Alu 16 305 -5 1760 181 0 23 chr17 12043233 12043542 -73394938 - AluJo SINE Alu -10 302 1 717 97 35 14 chr17 12044451 12044595 -73393885 + (TGGA)n Simple_repeat Simple_repeat 4 150 0 21 0 0 0 chr17 12045109 12045130 -73393350 + AT_rich Low_complexity Low_complexity 1 21 0 215 259 141 12 chr17 12045452 12045537 -73392943 - MIR SINE MIR -123 139 44 217 143 0 24 chr17 12045956 12045998 -73392482 + (TCCC)n Simple_repeat Simple_repeat 1 41 0 619 38 19 38 chr17 12046338 12046444 -73392036 + (TAGA)n Simple_repeat Simple_repeat 3 106 0 206 255 10 20 chr17 12046445 12046543 -73391937 + (TA)n Simple_repeat Simple_repeat 1 97 0 2560 66 3 0 chr17 12047533 12047837 -73390643 - AluY SINE Alu -6 305 1 2371 83 3 0 chr17 12048040 12048342 -73390138 + AluY SINE Alu 1 303 -8 244 235 98 39 chr17 12049391 12049493 -73388987 + MER5A DNA MER1_type 80 187 -2 2107 124 0 3 chr17 12049899 12050197 -73388283 + AluSx SINE Alu 2 298 -14 1004 238 0 0 chr17 12050218 12050420 -73388060 + L1PB4 LINE L1 5927 6128 -28 1156 53 0 0 chr17 12050420 12050552 -73387928 + AluY SINE Alu 1 132 -179 2271 104 0 7 chr17 12050559 12050866 -73387614 + AluSx SINE Alu 1 305 -7 2366 96 0 3 chr17 12051025 12051337 -73387143 + AluY SINE Alu 1 311 0 1059 169 86 25 chr17 12052051 12052329 -73386151 + MER33 DNA MER1_type 7 301 -23 2196 82 58 7 chr17 12052416 12052708 -73385772 - AluSg SINE Alu -3 307 1 2382 85 3 3 chr17 12052868 12053173 -73385307 - AluSx SINE Alu -7 305 1 2212 114 10 0 chr17 12054125 12054422 -73384058 - AluSp SINE Alu -13 300 1 1753 161 6 22 chr17 12054699 12055021 -73383459 - L1MC1 LINE L1 0 6333 6017 260 242 16 0 chr17 12055039 12055101 -73383379 - AluSp/q SINE Alu -7 296 234 1161 155 24 24 chr17 12055103 12055309 -73383171 - AluJo SINE Alu -106 206 1 1097 146 0 0 chr17 12056042 12056193 -73382287 + AluSq/x SINE Alu 1 151 -162 440 172 0 35 chr17 12056196 12056283 -73382197 + FLAM_A SINE Alu 50 133 -9 2227 121 0 0 chr17 12056286 12056583 -73381897 + AluSg SINE Alu 1 297 -13 498 233 121 0 chr17 12056585 12056701 -73381779 - MER3 DNA MER1_type -71 138 9 1576 176 6 60 chr17 12056783 12057102 -73381378 - AluJo SINE Alu -10 302 1 448 143 26 0 chr17 12057102 12057179 -73381301 + MER3 DNA MER1_type 125 203 -6 302 222 0 0 chr17 12057142 12057196 -73381284 - MER3 DNA MER1_type -119 90 37 * 1350 187 16 89 chr17 12057438 12057834 -73380646 - MLT1A2 LTR MaLR 0 390 4 1722 61 223 4 chr17 12058173 12058420 -73380060 + AluY SINE Alu 1 301 -10 1020 233 75 19 chr17 12058424 12058797 -73379683 + L1MEc LINE L1 1195 1588 -5133 1140 267 35 41 chr17 12058812 12059322 -73379158 + L1MEc LINE L1 1535 2041 -4680 748 143 0 8 chr17 12059323 12059442 -73379038 + AluSg/x SINE Alu 191 308 -1 1161 243 53 9 chr17 12059442 12059779 -73378701 + L1MEc LINE L1 2042 2393 -4328 1063 203 18 57 chr17 12059781 12060008 -73378472 + MER58A DNA MER1_type 7 224 0 2005 251 54 30 chr17 12060055 12060160 -73378320 + L1MEc LINE L1 2521 2622 -3918 1711 238 50 53 chr17 12060160 12060724 -73377756 - MER68 LTR ERV1 0 562 1 2005 251 54 30 chr17 12060724 12061362 -73377118 + L1MEc LINE L1 2622 3282 -3258 1618 249 60 14 chr17 12061371 12062006 -73376474 + L1MEc LINE L1 3330 3993 -2547 * 1690 206 16 39 chr17 12062000 12062388 -73376092 + L1MEc LINE L1 20 398 -6142 1171 163 0 0 chr17 12062388 12062584 -73375896 + L1MD1 LINE L1 6042 6237 -5 2143 146 40 22 chr17 12062593 12062998 -73375482 + L1MC1 LINE L1 5673 6084 -249 242 184 0 20 chr17 12063013 12063062 -73375418 + L1MC2 LINE L1 6041 6088 -256 1692 135 10 24 chr17 12063117 12063405 -73375075 + L1MC1 LINE L1 6050 6333 0 1197 295 77 14 chr17 12063411 12063920 -73374560 + L1MEc LINE L1 4008 4548 -1992 301 288 16 40 chr17 12064351 12064476 -73374004 - MER117 DNA MER1_type -75 122 1 2534 87 0 0 chr17 12064797 12065106 -73373374 + AluSx SINE Alu 1 309 -3 2095 116 3 20 chr17 12065115 12065417 -73373063 + AluSx SINE Alu 1 297 -15 2399 96 0 0 chr17 12065676 12065978 -73372502 + AluSx SINE Alu 1 302 -10 703 235 149 5 chr17 12067088 12067309 -73371171 + MIR SINE MIR 2 254 -8 688 67 11 0 chr17 12067340 12067430 -73371050 - AluSg/x SINE Alu -45 267 177 684 167 127 0 chr17 12067639 12067789 -73370691 + MLT1C LTR MaLR 8 176 -291 2493 74 3 0 chr17 12067796 12068094 -73370386 + AluSp SINE Alu 1 299 -14 1012 146 52 38 chr17 12068110 12068323 -73370157 + L1PA16 LINE L1 5951 6166 0 1315 197 42 8 chr17 12068507 12068766 -73369714 + MLT1C LTR MaLR 200 467 0 6993 211 58 57 chr17 12069156 12071051 -73367429 + L1M4 LINE L1 5 1897 -4747 192 40 0 0 chr17 12071051 12071076 -73367404 + (GA)n Simple_repeat Simple_repeat 2 26 0 6993 211 58 57 chr17 12071076 12071422 -73367058 + L1M4 LINE L1 1897 2241 -4403 1931 116 94 0 chr17 12071422 12071698 -73366782 + AluSx SINE Alu 1 302 -10 6993 211 58 57 chr17 12071698 12071744 -73366736 + L1M4 LINE L1 2241 2285 -4359 1785 173 3 10 chr17 12071744 12072050 -73366430 - AluJo SINE Alu -8 304 1 6993 211 58 57 chr17 12072050 12072686 -73365794 + L1M4 LINE L1 2285 3050 -3594 795 211 0 0 chr17 12072698 12072840 -73365640 + L1MB7 LINE L1 6009 6150 -34 539 214 84 26 chr17 12073161 12073315 -73365165 + MER103 DNA DNA 2 164 -2 257 326 74 0 chr17 12073562 12073657 -73364823 + L2 LINE L2 3171 3272 0 222 215 31 15 chr17 12074562 12074627 -73363853 + MER5A DNA MER1_type 123 188 -1 800 263 5 10 chr17 12074636 12074834 -73363646 - MER58A DNA MER1_type 0 224 28 2318 98 0 0 chr17 12075029 12075325 -73363155 - AluSx SINE Alu -16 296 1 613 158 267 7 chr17 12075539 12075685 -73362795 - MER5A DNA MER1_type 0 189 6 2287 90 10 26 chr17 12076023 12076334 -73362146 + AluSc SINE Alu 1 306 -3 2700 90 58 21 chr17 12076399 12076831 -73361649 + LTR7 LTR ERV1 1 448 -2 16412 97 27 24 chr17 12076833 12079935 -73358545 + HERVH LTR ERV1 1 2987 -4726 878 129 20 7 chr17 12079929 12080076 -73358404 + HERVH LTR ERV1 3140 3288 -4425 * 974 142 0 7 chr17 12080068 12080216 -73358264 + HERVH LTR ERV1 3492 3638 -4075 * 1247 147 0 1 chr17 12080206 12080567 -73357913 + HERVH LTR ERV1 4744 5149 -2564 2634 92 50 35 chr17 12080568 12081157 -73357323 + HERVH LTR ERV1 5600 7713 0 2645 95 58 21 chr17 12081157 12081589 -73356891 + LTR7 LTR ERV1 1 448 -2 258 32 0 0 chr17 12083479 12083510 -73354970 + (T)n Simple_repeat Simple_repeat 1 31 0 452 234 78 52 chr17 12083734 12083965 -73354515 - L1ME4a LINE L1 -1 6120 5884 216 0 0 0 chr17 12084424 12084448 -73354032 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 695 288 97 59 chr17 12084480 12085018 -73353462 - L1ME4a LINE L1 -263 5858 5304 2198 88 14 7 chr17 12085073 12085357 -73353123 - AluSx SINE Alu -21 291 6 299 249 46 86 chr17 12085397 12085594 -73352886 - L1ME4a LINE L1 -1318 4828 4640 1409 85 5 35 chr17 12085962 12086161 -73352319 - AluSq SINE Alu -12 301 109 450 209 0 0 chr17 12086352 12086438 -73352042 + L1MC1 LINE L1 6248 6333 0 658 203 114 46 chr17 12086471 12086506 -73351974 + MER112 DNA MER1_type 8 39 -221 1136 183 72 113 chr17 12086506 12086894 -73351586 + MLT1A2 LTR MaLR 3 374 0 658 203 114 46 chr17 12086894 12087095 -73351385 + MER112 DNA MER1_type 39 260 0 378 0 0 0 chr17 12087301 12087343 -73351137 + (TG)n Simple_repeat Simple_repeat 2 43 0 480 290 107 18 chr17 12088350 12088574 -73349906 + MIR SINE MIR 3 246 -16 2115 102 20 16 chr17 12089145 12089450 -73349030 - AluSc SINE Alu -3 306 1 207 0 0 0 chr17 12089462 12089485 -73348995 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 585 280 86 11 chr17 12089950 12090136 -73348344 + MIR SINE MIR 4 203 -59 362 278 23 53 chr17 12090237 12090370 -73348110 + L2 LINE L2 3169 3297 -16 2313 124 33 28 chr17 12090615 12090977 -73347503 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr17 12091206 12091233 -73347247 + AT_rich Low_complexity Low_complexity 1 27 0 2168 185 92 184 chr17 12092777 12093475 -73345005 + L1MEc LINE L1 35 656 -5740 1060 157 42 60 chr17 12093475 12093520 -73344960 + AluJo SINE Alu 92 136 -176 2309 107 0 0 chr17 12093520 12093819 -73344661 + AluSx SINE Alu 1 299 -13 1060 157 42 60 chr17 12093819 12093989 -73344491 + AluJo SINE Alu 136 303 -9 2168 185 92 184 chr17 12093989 12094476 -73344004 + L1MEc LINE L1 656 1186 -5210 789 209 63 106 chr17 12094462 12094853 -73343627 + L1MEc LINE L1 1058 1383 -4832 * 394 264 42 16 chr17 12094897 12095065 -73343415 + L1ME2 LINE L1 5860 6035 -142 2456 254 65 45 chr17 12096215 12097002 -73341478 + MER21B LTR ERV1 1 803 -60 2525 61 0 13 chr17 12098182 12098493 -73339987 + AluY SINE Alu 1 307 -4 1666 163 101 88 chr17 12098999 12099203 -73339277 - Tigger2a DNA MER2_type -2274 434 234 2522 66 0 0 chr17 12099203 12099505 -73338975 + AluY SINE Alu 1 302 -9 1666 163 101 88 chr17 12099505 12099698 -73338782 - Tigger2a DNA MER2_type -2474 234 32 1729 123 0 20 chr17 12099772 12100023 -73338457 + AluSq SINE Alu 3 248 -65 2199 114 0 0 chr17 12100044 12100343 -73338137 + AluSx SINE Alu 1 299 -13 519 203 178 6 chr17 12100346 12100509 -73337971 + L1MEc LINE L1 2660 2850 -3365 651 197 107 26 chr17 12100662 12100896 -73337584 + L1MEc LINE L1 2850 3102 -3113 22 0 0 0 chr17 12100898 12100920 -73337560 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr17 12101168 12101206 -73337274 + AT_rich Low_complexity Low_complexity 1 38 0 208 271 94 24 chr17 12101371 12101456 -73337024 - MIR SINE MIR -4 258 168 247 171 92 26 chr17 12101549 12101625 -73336855 + MER20B DNA MER1_type 43 123 -660 234 222 0 0 chr17 12102361 12102406 -73336074 - L2 LINE L2 -19 3294 3250 203 0 37 0 chr17 12102688 12102715 -73335765 + (TC)n Simple_repeat Simple_repeat 1 28 0 31 0 0 0 chr17 12103069 12103100 -73335380 + AT_rich Low_complexity Low_complexity 1 31 0 354 182 0 69 chr17 12103107 12103266 -73335214 + (CATGT)n Simple_repeat Simple_repeat 3 150 0 278 346 85 11 chr17 12103275 12103463 -73335017 + L3 LINE CR1 1184 1385 -192 180 0 0 0 chr17 12103466 12103486 -73334994 + (T)n Simple_repeat Simple_repeat 1 20 0 1047 98 0 0 chr17 12103486 12103619 -73334861 - AluSq/x SINE Alu -179 133 1 808 300 102 20 chr17 12104223 12104566 -73333914 - L2 LINE L2 0 3313 2943 1841 158 28 0 chr17 12104569 12104860 -73333620 - AluSx SINE Alu -9 303 5 1445 227 159 34 chr17 12104886 12105071 -73333409 - L2 LINE L2 -1139 2175 2014 1685 143 14 38 chr17 12105071 12105358 -73333122 + AluSp SINE Alu 2 281 -32 231 36 0 0 chr17 12105358 12105386 -73333094 + (GAAA)n Simple_repeat Simple_repeat 4 31 0 1445 227 159 34 chr17 12105386 12105728 -73332752 - L2 LINE L2 -1299 2015 1581 1695 126 38 31 chr17 12105874 12105991 -73332489 + L1MA7 LINE L1 5997 6112 -179 2283 82 0 0 chr17 12105991 12106304 -73332176 + AluY SINE Alu 1 313 0 1695 126 38 31 chr17 12106304 12106478 -73332002 + L1MA7 LINE L1 6112 6291 0 210 263 18 0 chr17 12106657 12106714 -73331766 + GA-rich Low_complexity Low_complexity 1 58 0 2196 117 7 3 chr17 12106762 12107070 -73331410 + AluSc SINE Alu 1 309 0 212 356 34 39 chr17 12107135 12107289 -73331191 - MIR SINE MIR -63 145 3 2035 95 56 7 chr17 12107817 12108101 -73330379 + AluSg SINE Alu 1 298 -12 1208 257 39 81 chr17 12108442 12108594 -73329886 + Charlie7 DNA MER1_type 116 273 -2339 2420 75 0 7 chr17 12108594 12108889 -73329591 + AluSg SINE Alu 1 293 -17 1208 257 39 81 chr17 12108889 12109249 -73329231 + Charlie7 DNA MER1_type 273 604 -2008 2378 100 3 0 chr17 12109249 12109559 -73328921 + AluSp SINE Alu 1 311 -2 1208 257 39 81 chr17 12109559 12109614 -73328866 + Charlie7 DNA MER1_type 604 660 -1952 22 56 0 0 chr17 12109639 12109675 -73328805 + AT_rich Low_complexity Low_complexity 1 36 0 237 236 30 6 chr17 12109700 12109865 -73328615 + (TA)n Simple_repeat Simple_repeat 2 170 0 348 180 180 62 chr17 12109865 12109993 -73328487 + Charlie7 DNA MER1_type 733 875 -1737 * 1656 220 113 32 chr17 12109989 12110589 -73327891 + Charlie7 DNA MER1_type 1956 2604 -8 355 283 72 26 chr17 12110613 12110765 -73327715 - MER5A DNA MER1_type -6 183 25 530 265 0 15 chr17 12111005 12111137 -73327343 + MIR SINE MIR 107 236 -26 817 213 73 0 chr17 12111244 12111394 -73327086 + AluJb SINE Alu 133 293 -19 228 67 0 0 chr17 12111669 12111699 -73326781 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 239 176 235 29 chr17 12112875 12112943 -73325537 + Charlie8 DNA MER1_type 1 82 -2335 733 171 0 8 chr17 12112997 12113142 -73325338 - FLAM_A SINE Alu 0 144 1 2412 106 0 0 chr17 12114085 12114396 -73324084 - AluSx SINE Alu -1 311 1 2329 78 0 7 chr17 12115063 12115359 -73323121 - AluSc SINE Alu -15 294 1 2196 123 0 3 chr17 12116026 12116327 -73322153 - AluSc SINE Alu -9 300 1 2401 99 0 0 chr17 12116339 12116641 -73321839 - AluSg SINE Alu -7 303 2 1531 255 144 15 chr17 12116726 12117329 -73321151 - L1MC4a LINE L1 -1712 6096 5416 880 242 11 6 chr17 12117330 12117508 -73320972 - AluJb SINE Alu -22 290 112 407 290 28 46 chr17 12117508 12117599 -73320881 - L1MC4a LINE L1 -777 5369 5278 2297 99 0 0 chr17 12117599 12117893 -73320587 - AluSc SINE Alu -15 294 1 407 290 28 46 chr17 12117893 12118018 -73320462 - L1MC4a LINE L1 -868 5278 5157 3912 158 16 40 chr17 12118747 12119412 -73319068 + L1MB7 LINE L1 5457 6105 -79 2414 68 7 0 chr17 12119412 12119708 -73318772 + AluY SINE Alu 1 298 -13 3912 158 16 40 chr17 12119708 12119774 -73318706 + L1MB7 LINE L1 6105 6171 -13 243 185 19 0 chr17 12119774 12119828 -73318652 + MER113 DNA MER1_type? 210 264 -257 263 216 118 108 chr17 12120197 12120401 -73318079 - L1MC4 LINE L1 -1 8041 7836 2059 139 0 7 chr17 12120439 12120734 -73317746 - AluSx SINE Alu -19 293 1 681 244 13 0 chr17 12120759 12120915 -73317565 - L1ME2 LINE L1 -10 6154 5997 2097 132 0 0 chr17 12120977 12121273 -73317207 - AluSx SINE Alu -16 296 1 271 241 25 0 chr17 12121458 12121537 -73316943 - L1ME2 LINE L1 -383 5738 5658 1940 147 3 3 chr17 12121558 12121851 -73316629 + AluSx SINE Alu 1 293 -19 2323 94 3 0 chr17 12122239 12122536 -73315944 + AluSp SINE Alu 1 298 -15 1822 123 168 26 chr17 12122933 12123273 -73315207 - MLT1B LTR MaLR 0 390 3 195 114 0 0 chr17 12123572 12123607 -73314873 + (TA)n Simple_repeat Simple_repeat 2 36 0 2085 97 3 40 chr17 12123607 12123907 -73314573 - AluSx SINE Alu -23 289 1 387 0 0 0 chr17 12123938 12123981 -73314499 + (TG)n Simple_repeat Simple_repeat 2 44 0 226 273 246 0 chr17 12124869 12124979 -73313501 - MER5A DNA MER1_type -3 186 50 406 272 111 112 chr17 12125283 12126205 -73312275 + L1M2 LINE L1 530 1374 -5475 201 74 0 0 chr17 12126375 12126402 -73312078 + (A)n Simple_repeat Simple_repeat 1 27 0 294 280 13 0 chr17 12127526 12127601 -73310879 - L2 LINE L2 -301 2971 2896 194 263 70 18 chr17 12128229 12128286 -73310194 - L2 LINE L2 -5 3267 3208 449 290 161 18 chr17 12128360 12128584 -73309896 + MIR SINE MIR 7 262 0 481 276 39 54 chr17 12129789 12129992 -73308488 + MIR SINE MIR 17 216 -46 203 182 91 45 chr17 12131145 12131211 -73307269 - MIR SINE MIR -67 195 127 435 266 84 0 chr17 12132644 12132787 -73305693 - MIR SINE MIR -36 226 72 226 221 325 0 chr17 12133576 12133653 -73304827 - MIR SINE MIR -68 140 39 21 89 0 0 chr17 12133972 12134028 -73304452 + AT_rich Low_complexity Low_complexity 1 56 0 1449 143 129 49 chr17 12134300 12134586 -73303894 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 12135251 12135273 -73303207 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 12136638 12136666 -73301814 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 12137082 12137103 -73301377 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 12137347 12137375 -73301105 + AT_rich Low_complexity Low_complexity 1 28 0 1882 163 14 0 chr17 12137490 12137779 -73300701 - AluJo SINE Alu -19 293 1 1346 182 14 5 chr17 12138511 12138731 -73299749 - AluJo SINE Alu -90 222 1 222 336 84 8 chr17 12139188 12139307 -73299173 - L2 LINE L2 -4 3309 3182 2238 98 7 0 chr17 12139879 12140176 -73298304 + AluSp SINE Alu 1 299 -14 23 0 0 0 chr17 12140188 12140211 -73298269 + AT_rich Low_complexity Low_complexity 1 23 0 820 208 71 0 chr17 12143299 12143467 -73295013 - MIR SINE MIR -21 241 62 1295 230 88 41 chr17 12144030 12144669 -73293811 - L1MC5 LINE L1 -37 7924 7256 2260 96 48 0 chr17 12146542 12146834 -73291646 + AluSq SINE Alu 1 306 -7 1319 146 28 5 chr17 12147093 12147305 -73291175 + AluJb SINE Alu 87 303 -9 2527 51 0 0 chr17 12147409 12147703 -73290777 + AluY SINE Alu 1 294 -17 2162 187 49 130 chr17 12147997 12148806 -73289674 - MER21B LTR ERV1 -107 756 13 1482 143 47 53 chr17 12149186 12149508 -73288972 - MER21A LTR ERV1 -6 925 606 866 158 55 18 chr17 12149505 12149670 -73288810 - MER21B LTR ERV1 -692 171 1 * 1017 128 45 0 chr17 12152131 12152287 -73286193 - AluSq SINE Alu -17 296 134 1939 151 10 16 chr17 12152290 12152602 -73285878 - AluSq SINE Alu -3 310 1 2501 61 15 6 chr17 12153353 12153682 -73284798 + L1PA8 LINE L1 5841 6172 0 198 0 0 0 chr17 12153682 12153704 -73284776 + (GA)n Simple_repeat Simple_repeat 1 22 0 545 281 6 18 chr17 12154466 12154633 -73283847 - FRAM SINE Alu 0 166 2 290 252 32 16 chr17 12155616 12155739 -73282741 - MER113 DNA MER1_type? -393 128 4 436 285 136 24 chr17 12156276 12156658 -73281822 - L1ME4a LINE L1 -83 6038 5614 695 275 96 43 chr17 12156664 12156721 -73281759 - LTR16A LTR ERVL -7 443 390 2326 104 0 13 chr17 12156721 12157029 -73281451 + AluSx SINE Alu 1 304 -8 695 275 96 43 chr17 12157029 12157332 -73281148 - LTR16A LTR ERVL -60 390 79 3634 251 207 25 chr17 12157683 12159230 -73279250 + L2 LINE L2 1207 3056 -257 513 325 108 7 chr17 12159463 12159758 -73278722 + LTR16C LTR ERVL 167 491 0 454 294 23 34 chr17 12159857 12160034 -73278446 + L2 LINE L2 3132 3306 -7 366 248 79 0 chr17 12160090 12160191 -73278289 + MIR SINE MIR 37 145 -117 198 71 0 0 chr17 12161169 12161197 -73277283 + (CA)n Simple_repeat Simple_repeat 1 28 0 21 71 0 0 chr17 12161570 12161612 -73276868 + AT_rich Low_complexity Low_complexity 1 42 0 631 144 10 0 chr17 12161863 12161967 -73276513 + MER2 DNA MER2_type 1 105 -240 1464 172 38 91 chr17 12161974 12162180 -73276300 + THE1C LTR MaLR 1 216 -159 3430 98 226 2 chr17 12162180 12162742 -73275738 - LTR12 LTR ERV1 0 688 1 1464 172 38 91 chr17 12162742 12162860 -73275620 + THE1C LTR MaLR 216 304 -71 2270 81 0 7 chr17 12162860 12163194 -73275286 - AluY SINE Alu 0 333 2 1464 172 38 91 chr17 12163194 12163263 -73275217 + THE1C LTR MaLR 304 375 0 534 212 157 30 chr17 12163264 12163462 -73275018 + MER2 DNA MER2_type 123 345 0 213 185 0 154 chr17 12163523 12163588 -73274892 - MIR SINE MIR -122 140 86 311 301 77 42 chr17 12163716 12163859 -73274621 + L2 LINE L2 3124 3271 -1 4057 127 11 19 chr17 12163928 12164431 -73274049 + MER41B LTR ERV1 1 499 -136 2420 69 6 31 chr17 12164431 12164750 -73273730 - AluY SINE Alu 0 311 1 4057 127 11 19 chr17 12164750 12164886 -73273594 + MER41B LTR ERV1 499 635 0 502 274 54 54 chr17 12165178 12165437 -73273043 + L1M4 LINE L1 2995 3253 -2893 3854 151 41 76 chr17 12165504 12165850 -73272630 - MER4D LTR ERV1 0 866 509 2576 30 7 3 chr17 12165850 12166153 -73272327 + AluY SINE Alu 1 304 -7 3854 151 41 76 chr17 12166153 12166746 -73271734 - MER4D LTR ERV1 -357 509 1 1065 285 94 24 chr17 12166747 12167532 -73270948 + L1M4 LINE L1 3487 4332 -1814 240 214 0 0 chr17 12167532 12167574 -73270906 - L2 LINE L2 -12 3260 3219 342 319 14 28 chr17 12167669 12167810 -73270670 - L2 LINE L2 -202 3070 2932 190 222 0 0 chr17 12167888 12167924 -73270556 + L2 LINE L2 3274 3309 -4 722 176 0 0 chr17 12168065 12168196 -73270284 + MLT2B1 LTR ERVL 1 131 -389 805 216 9 105 chr17 12168244 12168329 -73270151 + L1ME3A LINE L1 5853 5945 -225 2559 59 0 0 chr17 12168329 12168632 -73269848 + AluY SINE Alu 1 303 -8 805 216 9 105 chr17 12168632 12168824 -73269656 + L1ME3A LINE L1 5945 6097 -73 3120 130 16 6 chr17 12168824 12169330 -73269150 - MER75 DNA T2_type -3 511 1 805 216 9 105 chr17 12169330 12169375 -73269105 + L1ME3A LINE L1 6097 6145 -25 2559 138 41 10 chr17 12169375 12169576 -73268904 + MER61B LTR ERV1 1 194 -231 303 28 0 0 chr17 12169576 12169612 -73268868 + (GCCTG)n Simple_repeat Simple_repeat 1 36 0 2559 138 41 10 chr17 12169612 12169822 -73268658 + MER61B LTR ERV1 194 425 0 219 57 0 75 chr17 12170441 12170494 -73267986 + (CCCCCT)n Simple_repeat Simple_repeat 1 49 0 243 125 0 0 chr17 12170502 12170542 -73267938 + (TC)n Simple_repeat Simple_repeat 1 40 0 414 268 75 85 chr17 12170649 12171086 -73267394 - L1MEd LINE L1 -5125 994 562 361 354 85 60 chr17 12171144 12171624 -73266856 - L1MEd LINE L1 -5617 502 11 544 301 24 5 chr17 12172028 12172382 -73266098 + L1 LINE L1 2127 2485 -3661 24 0 0 0 chr17 12172479 12172503 -73265977 + AT_rich Low_complexity Low_complexity 1 24 0 284 327 31 28 chr17 12172568 12172895 -73265585 + L1 LINE L1 2701 3028 -3118 23 33 0 0 chr17 12173360 12173390 -73265090 + AT_rich Low_complexity Low_complexity 1 30 0 358 308 93 6 chr17 12173392 12173564 -73264916 + L1 LINE L1 3681 3867 -2279 7956 128 16 10 chr17 12173677 12174971 -73263509 + HSMAR2 DNA Mariner 2 1302 0 914 185 0 0 chr17 12175670 12175827 -73262653 + Tigger7 DNA MER2_type 235 391 -2096 2257 92 0 0 chr17 12175828 12176160 -73262320 + AluSx SINE Alu 1 332 0 373 238 0 0 chr17 12176200 12176280 -73262200 + Tigger7 DNA MER2_type 2411 2490 -1 198 316 150 28 chr17 12176280 12176533 -73261947 + L2 LINE L2 2391 2674 -640 219 139 0 0 chr17 12176590 12176626 -73261854 + (CA)n Simple_repeat Simple_repeat 2 37 0 1306 156 90 11 chr17 12176634 12176963 -73261517 - Tigger4(Zombi) DNA MER2_type 0 2731 1 298 343 130 4 chr17 12176990 12177244 -73261236 - L2 LINE L2 -11 3302 3017 1846 128 6 56 chr17 12178113 12178432 -73260048 + AluSx SINE Alu 1 303 -9 21 71 0 0 chr17 12178722 12178764 -73259716 + AT_rich Low_complexity Low_complexity 1 42 0 559 133 40 77 chr17 12178864 12179027 -73259453 + L1MB8 LINE L1 6030 6183 -1 * 1157 183 50 27 chr17 12179012 12179313 -73259167 - L1MA9 LINE L1 -7 6305 5998 1843 161 0 16 chr17 12179650 12180009 -73258471 + AluJo SINE Alu 1 354 0 300 53 0 0 chr17 12180081 12180119 -73258361 + (TG)n Simple_repeat Simple_repeat 2 39 0 543 183 29 10 chr17 12181806 12181910 -73256570 + MER81 DNA DNA 1 106 -8 231 286 0 23 chr17 12181898 12181985 -73256495 + MLT1I LTR MaLR 81 146 -263 * 411 228 0 0 chr17 12182187 12182279 -73256201 + MLT1H LTR MaLR 458 549 0 1766 148 184 11 chr17 12182376 12182554 -73255926 + MSTA LTR MaLR 2 148 -280 525 16 0 0 chr17 12182554 12182616 -73255864 + (TC)n Simple_repeat Simple_repeat 1 62 0 1766 148 184 11 chr17 12182616 12182801 -73255679 + MSTA LTR MaLR 148 428 0 4873 134 9 31 chr17 12182989 12183208 -73255272 - MER54B LTR ERVL -3 790 568 2154 122 10 7 chr17 12183208 12183511 -73254969 + AluSq SINE Alu 1 304 -9 4873 134 9 31 chr17 12183511 12184099 -73254381 - MER54B LTR ERVL -225 568 1 2165 124 3 0 chr17 12184603 12184909 -73253571 + AluSx SINE Alu 1 307 -5 276 53 0 0 chr17 12185386 12185424 -73253056 + (TG)n Simple_repeat Simple_repeat 2 39 0 447 106 0 0 chr17 12186613 12186679 -73251801 + (CA)n Simple_repeat Simple_repeat 2 67 0 207 0 0 0 chr17 12188282 12188305 -73250175 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 284 196 71 0 chr17 12188851 12188907 -73249573 + L2 LINE L2 3252 3311 -2 435 0 0 0 chr17 12189059 12189111 -73249369 + MADE1 DNA Mariner 2 53 -27 1230 138 0 5 chr17 12189350 12189545 -73248935 + L1PB4 LINE L1 5954 6147 -9 770 239 151 48 chr17 12189873 12190271 -73248209 + MLT1J2 LTR MaLR 12 450 0 441 254 189 0 chr17 12190982 12191104 -73247376 + MER5A DNA MER1_type 39 183 -6 2074 133 133 13 chr17 12191340 12191722 -73246758 + MSTA LTR MaLR 1 428 0 351 285 84 9 chr17 12191951 12192165 -73246315 - L1ME4a LINE L1 -239 5882 5653 450 305 114 15 chr17 12192807 12193069 -73245411 - L1ME4a LINE L1 -1717 4429 4142 2392 89 0 0 chr17 12193765 12194058 -73244422 - AluSc SINE Alu -16 293 1 236 264 230 13 chr17 12194265 12194504 -73243976 - LTR33A LTR ERVL -7 516 226 1646 279 117 0 chr17 12194761 12195362 -73243118 + MER69 DNA AcHobo 5 675 -1851 303 322 0 0 chr17 12195363 12195450 -73243030 - L1MC4 LINE L1 -1341 6701 6615 225 226 0 0 chr17 12195457 12195510 -73242970 + (TA)n Simple_repeat Simple_repeat 1 53 0 234 273 0 0 chr17 12195520 12195608 -73242872 - L1MC4 LINE L1 -1340 6702 6615 288 243 0 0 chr17 12195610 12195684 -73242796 + (TA)n Simple_repeat Simple_repeat 1 74 0 388 224 47 0 chr17 12195695 12195780 -73242700 - L1MC4 LINE L1 -1339 6703 6615 2399 71 7 13 chr17 12195780 12196088 -73242392 - AluY SINE Alu -5 306 1 246 281 0 11 chr17 12196088 12196177 -73242303 + MER69 DNA AcHobo 686 773 -1753 249 245 213 38 chr17 12196467 12196630 -73241850 + MIR SINE MIR 13 190 -67 204 300 50 0 chr17 12197206 12197266 -73241214 + MER91C DNA MER1_type 32 94 -46 842 257 82 47 chr17 12197291 12197695 -73240785 + MLT1J1 LTR MaLR 21 438 -8 206 313 31 0 chr17 12198753 12198817 -73239663 + L2 LINE L2 2995 3060 -212 2398 89 3 0 chr17 12198884 12199188 -73239292 - AluY SINE Alu -6 305 1 387 0 0 0 chr17 12199190 12199233 -73239247 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2156 78 3 7 chr17 12199233 12199516 -73238964 - AluY SINE Alu -29 282 1 22 35 0 0 chr17 12199650 12199679 -73238801 + AT_rich Low_complexity Low_complexity 1 29 0 640 233 0 23 chr17 12199981 12200114 -73238366 + FLAM_A SINE Alu 1 130 -3 299 261 30 12 chr17 12200180 12200332 -73238148 - L1MC4 LINE L1 -690 5431 5310 482 240 36 77 chr17 12200457 12200653 -73237827 - MLT1K LTR MaLR -2 586 399 324 346 39 0 chr17 12200705 12200861 -73237619 - MLT1K LTR MaLR -303 285 124 448 286 33 16 chr17 12201709 12201954 -73236526 + L1MEc LINE L1 1877 2125 -4271 * 1737 230 30 26 chr17 12201935 12202475 -73236005 + L1MEc LINE L1 2342 2883 -3332 2325 92 10 0 chr17 12202531 12202825 -73235655 + AluSx SINE Alu 1 297 -15 198 0 0 0 chr17 12202825 12202847 -73235633 + (GA)n Simple_repeat Simple_repeat 2 23 0 673 247 74 23 chr17 12203881 12204218 -73234262 - LTR33A LTR ERVL -2 521 137 23 33 0 0 chr17 12204970 12205000 -73233480 + AT_rich Low_complexity Low_complexity 1 30 0 840 183 23 17 chr17 12205998 12206173 -73232307 + MLT1B LTR MaLR 1 176 -214 1796 174 0 17 chr17 12206175 12206469 -73232011 + AluJb SINE Alu 1 289 -23 211 250 47 107 chr17 12206507 12206689 -73231791 + MIR SINE MIR 27 191 -71 351 0 0 0 chr17 12207096 12207135 -73231345 + (CA)n Simple_repeat Simple_repeat 2 40 0 181 278 124 57 chr17 12207236 12207310 -73231170 - L2 LINE L2 -222 3050 2982 2481 89 0 0 chr17 12207310 12207612 -73230868 + AluSg SINE Alu 1 302 -8 181 278 124 57 chr17 12207612 12207731 -73230749 - L2 LINE L2 -290 2982 2844 197 178 22 0 chr17 12209019 12209064 -73229416 + (CA)n Simple_repeat Simple_repeat 2 47 0 14174 189 32 17 chr17 12209457 12216027 -73222453 + L1PB1 LINE L1 6 6867 0 313 117 48 179 chr17 12216438 12216583 -73221897 - MER103 DNA DNA -18 148 23 276 313 22 11 chr17 12217783 12217965 -73220515 + L1ME3 LINE L1 1279 1462 -4961 386 336 13 7 chr17 12217971 12218120 -73220360 + L1ME3 LINE L1 1656 1805 -5126 391 303 112 26 chr17 12218219 12218753 -73219727 + L1ME3 LINE L1 1926 2543 -4532 4410 260 91 54 chr17 12219017 12220790 -73217690 + L1ME3 LINE L1 3308 5014 -1951 2171 135 67 0 chr17 12220790 12221131 -73217349 + THE1B LTR MaLR 1 364 0 4410 260 91 54 chr17 12221131 12222280 -73216200 + L1ME3 LINE L1 5014 6367 -598 1626 172 14 21 chr17 12222280 12222600 -73215880 + AluJb SINE Alu 1 318 0 4410 260 91 54 chr17 12222600 12222910 -73215570 + L1ME3 LINE L1 6367 6664 -301 528 157 25 41 chr17 12222976 12223097 -73215383 + L1ME3 LINE L1 6671 6789 -168 504 228 164 32 chr17 12223109 12223298 -73215182 + MLT1K LTR MaLR 373 586 -2 1951 106 16 0 chr17 12223406 12223690 -73214790 - AluY SINE Alu 0 313 26 1114 253 93 30 chr17 12224006 12224123 -73214357 + MLT1C LTR MaLR 1 109 -358 1737 151 0 15 chr17 12224123 12224394 -73214086 - AluJo SINE Alu -11 301 35 1114 253 93 30 chr17 12224394 12224715 -73213765 + MLT1C LTR MaLR 109 467 0 2410 75 0 7 chr17 12225104 12225411 -73213069 + AluSc SINE Alu 1 305 -4 322 130 0 0 chr17 12225611 12225665 -73212815 - L1MA6 LINE L1 0 6300 6247 814 181 36 0 chr17 12225685 12225823 -73212657 - FRAM SINE Alu -34 142 1 771 138 119 0 chr17 12225843 12226002 -73212478 - L1MA6 LINE L1 -56 6244 6067 199 351 45 27 chr17 12226253 12226364 -73212116 - L2 LINE L2 -18 3254 3142 602 284 101 0 chr17 12226446 12226664 -73211816 - MIR SINE MIR -14 248 9 1902 162 0 26 chr17 12227174 12227215 -73211265 - AluJo SINE Alu 0 312 271 180 0 0 0 chr17 12227215 12227235 -73211245 + (TTGG)n Simple_repeat Simple_repeat 4 23 0 1902 162 0 26 chr17 12227235 12227531 -73210949 - AluJo SINE Alu -41 271 1 719 199 31 82 chr17 12228280 12228476 -73210004 - MER5A DNA MER1_type -3 186 1 402 301 77 64 chr17 12228608 12228996 -73209484 + MLT1K LTR MaLR 187 579 -9 258 276 148 49 chr17 12230448 12230814 -73207666 + MLT1J LTR MaLR 110 511 0 31 26 0 0 chr17 12231540 12231578 -73206902 + AT_rich Low_complexity Low_complexity 1 38 0 15885 198 19 28 chr17 12232078 12237916 -73200564 + L1PA16 LINE L1 1026 6811 -6 23 0 0 0 chr17 12238074 12238097 -73200383 + AT_rich Low_complexity Low_complexity 1 23 0 1931 149 31 0 chr17 12238238 12238526 -73199954 + AluSx SINE Alu 1 297 -15 270 0 0 0 chr17 12238529 12238559 -73199921 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 912 218 11 0 chr17 12238979 12239153 -73199327 + AluJb SINE Alu 137 312 0 304 151 0 27 chr17 12239153 12239226 -73199254 + GA-rich Low_complexity Low_complexity 2 72 0 202 246 31 15 chr17 12239237 12239302 -73199178 + GA-rich Low_complexity Low_complexity 1 66 0 305 262 19 37 chr17 12239309 12239416 -73199064 + L1M4 LINE L1 4316 4420 -1726 1120 101 11 6 chr17 12239423 12239601 -73198879 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 716 315 102 68 chr17 12239656 12240548 -73197932 + L1MC4a LINE L1 3447 4375 -1771 7460 32 6 1 chr17 12240665 12241562 -73196918 + L1PA3 LINE L1 5254 6154 -1 376 345 43 17 chr17 12241584 12241819 -73196661 - L1M4 LINE L1 -1053 5093 4853 269 286 78 55 chr17 12241928 12242455 -73196025 + L1MC4a LINE L1 4626 5164 -982 361 231 49 140 chr17 12242663 12242906 -73195574 + L1MC4a LINE L1 5409 5629 -2179 334 233 125 42 chr17 12242952 12243072 -73195408 - L2 LINE L2 -13 3300 3171 400 267 30 0 chr17 12243087 12243222 -73195258 + L1MC4a LINE L1 5768 5906 -1902 1626 179 15 57 chr17 12244001 12244408 -73194072 + MLT1B LTR MaLR 1 390 0 628 129 14 86 chr17 12244462 12244551 -73193929 + L1MB3 LINE L1 6054 6131 -52 2251 62 13 13 chr17 12244551 12244856 -73193624 + AluY SINE Alu 1 305 -6 628 129 14 86 chr17 12244856 12244906 -73193574 + L1MB3 LINE L1 6131 6183 0 1022 68 0 0 chr17 12245487 12245619 -73192861 - AluY SINE Alu -11 300 169 2978 61 80 0 chr17 12245719 12245760 -73192720 - MLT2A1 LTR ERVL 0 444 408 216 0 0 0 chr17 12245760 12245784 -73192696 + (TA)n Simple_repeat Simple_repeat 2 25 0 2978 61 80 0 chr17 12245784 12246153 -73192327 - MLT2A1 LTR ERVL -36 408 1 284 231 22 66 chr17 12246317 12246408 -73192072 + MIR SINE MIR 106 192 -70 644 304 42 17 chr17 12248223 12248460 -73190020 - MIR SINE MIR 0 262 20 189 301 38 60 chr17 12249053 12249186 -73189294 - L2 LINE L2 -180 3092 2963 2195 110 10 3 chr17 12249237 12249545 -73188935 + AluSx SINE Alu 1 310 -2 544 243 71 136 chr17 12250698 12251152 -73187328 - Charlie8 DNA MER1_type -2182 235 16 365 299 42 60 chr17 12251157 12251324 -73187156 - MIR3 SINE MIR -37 171 8 190 280 13 53 chr17 12251391 12251466 -73187014 + L2 LINE L2 3201 3272 0 231 36 0 0 chr17 12251473 12251501 -73186979 + (TGGA)n Simple_repeat Simple_repeat 1 28 0 376 309 82 60 chr17 12251743 12251976 -73186504 + L1MC4a LINE L1 5683 5920 -1888 2771 10 0 0 chr17 12253281 12253588 -73184892 - AluYa5 SINE Alu -4 307 1 2146 118 3 7 chr17 12253883 12254189 -73184291 + AluSg SINE Alu 1 305 -5 336 250 0 0 chr17 12254764 12254844 -73183636 - MER58 DNA MER1_type -2136 284 205 235 326 51 0 chr17 12254984 12255082 -73183398 - L2 LINE L2 -9 3263 3161 326 258 93 10 chr17 12255304 12255401 -73183079 - L2 LINE L2 -19 3294 3190 1397 203 39 36 chr17 12255706 12256070 -73182410 - MLT1A1 LTR MaLR 0 365 1 458 199 122 15 chr17 12256123 12256254 -73182226 - MER58C DNA MER1_type -2 213 69 303 293 98 39 chr17 12256435 12256673 -73181807 + MIR3 SINE MIR 2 255 -7 2275 91 0 14 chr17 12257336 12257633 -73180847 + AluSc SINE Alu 1 293 -16 1849 174 29 66 chr17 12257748 12258230 -73180250 + MLT1C LTR MaLR 4 467 0 847 330 119 38 chr17 12258755 12259721 -73178759 + L1M4 LINE L1 3425 4471 -1675 362 243 56 36 chr17 12259915 12260132 -73178348 - MLT1I LTR MaLR -140 269 79 417 286 64 36 chr17 12260590 12261121 -73177359 + L1M4 LINE L1 2596 3141 -3005 24 0 0 0 chr17 12261181 12261205 -73177275 + AT_rich Low_complexity Low_complexity 1 24 0 243 122 0 0 chr17 12261536 12261585 -73176895 + (T)n Simple_repeat Simple_repeat 1 49 0 360 0 0 0 chr17 12261585 12261625 -73176855 + (TG)n Simple_repeat Simple_repeat 1 40 0 2379 95 3 0 chr17 12262239 12262545 -73175935 + AluSx SINE Alu 1 307 -5 342 335 62 22 chr17 12262957 12263181 -73175299 + L1ME4a LINE L1 5743 5975 -146 2292 90 0 20 chr17 12263181 12263481 -73174999 + AluSq SINE Alu 1 294 -19 229 280 0 13 chr17 12263481 12263556 -73174924 + HAL1b LINE L1 1226 1299 -49 494 225 0 29 chr17 12264211 12264349 -73174131 + L1ME4a LINE L1 5979 6112 -9 315 205 145 24 chr17 12265073 12265156 -73173324 + MIR3 SINE MIR 67 159 -49 306 0 0 0 chr17 12265286 12265320 -73173160 + (TA)n Simple_repeat Simple_repeat 2 35 0 2479 46 0 23 chr17 12265320 12265626 -73172854 - AluY SINE Alu -12 299 1 2405 125 9 60 chr17 12266961 12267409 -73171071 + L1PA15 LINE L1 5740 6164 -1 2341 100 0 0 chr17 12267528 12267829 -73170651 - AluY SINE Alu -10 301 1 666 356 62 12 chr17 12269589 12269993 -73168487 + L2 LINE L2 88 511 -2803 2132 128 0 3 chr17 12270198 12270487 -73167993 + AluSx SINE Alu 1 288 -24 508 279 52 96 chr17 12270966 12271085 -73167395 - L1MEc LINE L1 -3559 2570 2447 2255 121 0 0 chr17 12271085 12271390 -73167090 - AluSx SINE Alu -7 305 1 508 279 52 96 chr17 12271390 12271763 -73166717 - L1MEc LINE L1 -3682 2447 2145 2393 140 35 21 chr17 12271763 12271992 -73166488 - Tigger2a DNA MER2_type -2274 434 195 2121 116 10 0 chr17 12271992 12272286 -73166194 + AluY SINE Alu 1 297 -14 2393 140 35 21 chr17 12272286 12272484 -73165996 - Tigger2a DNA MER2_type -2513 195 1 508 279 52 96 chr17 12272484 12272639 -73165841 - L1MEc LINE L1 -3984 2145 1985 2302 84 0 7 chr17 12272759 12273058 -73165422 - AluSg SINE Alu -13 297 1 319 266 64 18 chr17 12273248 12273466 -73165014 - L1MEc LINE L1 -4733 1577 1350 7127 53 9 0 chr17 12273613 12274604 -73163876 + L1PA8 LINE L1 5174 6172 0 434 259 99 53 chr17 12274608 12274983 -73163497 - L1MEc LINE L1 -4923 1196 805 2474 255 98 29 chr17 12275044 12275060 -73163420 - L2 LINE L2 -9 3304 3291 2582 52 3 0 chr17 12275060 12275368 -73163112 + AluY SINE Alu 1 309 -2 2474 255 98 29 chr17 12275368 12276227 -73162253 - L2 LINE L2 -22 3291 2332 1557 264 58 36 chr17 12276227 12276757 -73161723 - MLT1F LTR MaLR 0 542 1 2474 255 98 29 chr17 12276757 12276940 -73161540 - L2 LINE L2 -981 2332 2163 5569 282 162 12 chr17 12278454 12281105 -73157375 + L2 LINE L2 28 3123 -190 1618 174 138 31 chr17 12281105 12281524 -73156956 + MLT1C LTR MaLR 4 467 0 5569 282 162 12 chr17 12281524 12281613 -73156867 + L2 LINE L2 3123 3197 -116 428 0 19 0 chr17 12281665 12281717 -73156763 + (TC)n Simple_repeat Simple_repeat 2 54 0 390 200 0 38 chr17 12281808 12281888 -73156592 + L2 LINE L2 3237 3313 0 2534 47 7 0 chr17 12282174 12282470 -73156010 - AluSp SINE Alu -15 298 1 1939 48 8 0 chr17 12283304 12283556 -73154924 - L1PA4 LINE L1 -20 6135 5882 1620 25 5 0 chr17 12283552 12283752 -73154728 + L1PA4 LINE L1 5678 5878 -277 * 213 212 16 69 chr17 12284092 12284281 -73154199 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 353 99 123 31 chr17 12284260 12284480 -73154000 + (ATATG)n Simple_repeat Simple_repeat 1 240 0 246 83 102 9 chr17 12284591 12284699 -73153781 + (ATATG)n Simple_repeat Simple_repeat 3 120 0 263 164 0 97 chr17 12284714 12284909 -73153571 + (TA)n Simple_repeat Simple_repeat 2 177 0 * 359 131 89 30 chr17 12284769 12284937 -73153543 + (ATATG)n Simple_repeat Simple_repeat 3 180 0 211 205 103 13 chr17 12285142 12285298 -73153182 + (ATATG)n Simple_repeat Simple_repeat 2 171 0 293 204 72 24 chr17 12285309 12285528 -73152952 + (ATATG)n Simple_repeat Simple_repeat 1 229 0 1672 154 48 34 chr17 12285592 12285950 -73152530 + L1MB3 LINE L1 5814 6176 -7 2415 89 0 0 chr17 12286236 12286539 -73151941 + AluSq SINE Alu 1 303 -10 763 223 63 6 chr17 12287775 12287950 -73150530 - MIR SINE MIR -12 250 66 308 291 240 11 chr17 12288092 12288267 -73150213 + MIR SINE MIR 3 217 -45 441 346 33 5 chr17 12288720 12288922 -73149558 + MIR SINE MIR 20 228 -34 44 0 0 0 chr17 12289180 12289224 -73149256 + AT_rich Low_complexity Low_complexity 1 44 0 211 367 27 27 chr17 12290751 12290901 -73147579 - L2 LINE L2 -204 3068 2919 2023 124 0 29 chr17 12291892 12292199 -73146281 + AluSx SINE Alu 1 298 -14 325 195 35 13 chr17 12292368 12292481 -73145999 + MIR SINE MIR 70 147 -61 1236 268 118 8 chr17 12293114 12293614 -73144866 + MLT1H1 LTR MaLR 1 555 0 2456 181 40 11 chr17 12295494 12296023 -73142457 + MER74A LTR ERVL 3 546 -12 2230 108 3 25 chr17 12296905 12297220 -73141260 + AluSx SINE Alu 1 308 -4 886 207 73 17 chr17 12297243 12297422 -73141058 + AluJo SINE Alu 87 275 -37 1879 218 28 19 chr17 12297535 12298008 -73140472 - L1MEc LINE L1 -5880 516 40 2312 97 3 0 chr17 12298023 12298322 -73140158 - AluSg SINE Alu -10 300 1 2301 101 7 7 chr17 12299059 12299365 -73139115 + AluSq SINE Alu 1 306 -7 2576 53 3 0 chr17 12299625 12299927 -73138553 + AluY SINE Alu 1 303 -8 322 260 128 25 chr17 12300349 12300545 -73137935 - L2 LINE L2 -958 2356 2141 2202 129 3 0 chr17 12300910 12301220 -73137260 + AluSx SINE Alu 1 311 -1 965 292 113 24 chr17 12301835 12302515 -73135965 + L1ME4a LINE L1 5328 6080 -41 450 339 0 8 chr17 12304713 12304843 -73133637 + MIR SINE MIR 20 148 -60 2711 55 15 6 chr17 12304848 12305177 -73133303 + L1PA8 LINE L1 5841 6172 0 198 0 0 0 chr17 12305177 12305199 -73133281 + (GA)n Simple_repeat Simple_repeat 1 22 0 1061 150 6 12 chr17 12305955 12306128 -73132352 - FRAM SINE Alu -3 173 2 2202 214 137 9 chr17 12306289 12306844 -73131636 + L1MD3 LINE L1 7370 7995 0 3118 112 216 62 chr17 12307399 12307995 -73130485 + LTR12 LTR ERV1 1 688 0 2492 53 6 38 chr17 12308655 12308974 -73129506 - AluY SINE Alu -2 309 1 24 32 0 0 chr17 12309118 12309149 -73129331 + AT_rich Low_complexity Low_complexity 1 31 0 1178 218 45 37 chr17 12310740 12311120 -73127360 + LTR37A LTR ERV1 42 424 -2 2278 102 0 28 chr17 12312076 12312398 -73126082 - AluSq SINE Alu 0 313 1 345 322 70 0 chr17 12313074 12313189 -73125291 + MIR SINE MIR 8 130 -132 410 222 26 17 chr17 12313279 12313396 -73125084 + MIR SINE MIR 131 248 -14 1981 155 0 3 chr17 12313763 12314066 -73124414 - AluJb SINE Alu -10 302 1 505 294 113 5 chr17 12314963 12315184 -73123296 - MLT1L LTR MaLR -18 597 353 282 257 0 14 chr17 12315269 12315339 -73123141 - MLT1L LTR MaLR -379 236 168 1021 244 20 20 chr17 12315481 12315735 -73122745 - MIR SINE MIR -1 261 8 183 100 0 0 chr17 12315785 12315815 -73122665 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 554 186 0 0 chr17 12316536 12316633 -73121847 + MER53 DNA DNA 1 97 -92 273 281 11 34 chr17 12316787 12316876 -73121604 + MIR SINE MIR 20 106 -102 962 178 76 16 chr17 12317857 12318042 -73120438 + MLT2B2 LTR ERVL 1 196 -319 1307 168 86 53 chr17 12318228 12318532 -73119948 + MLT2B2 LTR ERVL 161 474 -41 204 216 0 0 chr17 12318543 12318594 -73119886 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 2443 202 115 18 chr17 12319277 12319823 -73118657 + L1MA10 LINE L1 5671 6281 -53 2207 110 3 3 chr17 12319823 12320122 -73118358 - AluSx SINE Alu -13 299 1 2443 202 115 18 chr17 12320122 12320174 -73118306 + L1MA10 LINE L1 6281 6327 -7 617 309 44 58 chr17 12320677 12321156 -73117324 + L2 LINE L2 2804 3275 -38 367 261 117 18 chr17 12322340 12322451 -73116029 - MLT1I LTR MaLR -6 403 282 308 320 25 8 chr17 12322505 12322627 -73115853 - MLT1J1 LTR MaLR -291 155 32 2473 86 0 6 chr17 12323604 12323919 -73114561 + AluSq SINE Alu 1 313 0 762 245 19 19 chr17 12324429 12324641 -73113839 + LTR9B LTR ERV1 7 218 -426 8164 109 161 28 chr17 12324646 12326143 -73112337 - pTR5 LTR ERV1 0 2438 743 2314 186 9 9 chr17 12326146 12326566 -73111914 + LTR9B LTR ERV1 225 644 0 195 42 0 0 chr17 12326839 12326863 -73111617 + (C)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr17 12327461 12327483 -73110997 + AT_rich Low_complexity Low_complexity 1 22 0 344 309 86 7 chr17 12328402 12328554 -73109926 - MIR SINE MIR -43 219 56 2264 105 0 0 chr17 12328972 12329267 -73109213 + AluSg SINE Alu 1 295 -15 186 191 0 0 chr17 12329268 12329310 -73109170 + (TA)n Simple_repeat Simple_repeat 1 42 0 23 0 0 0 chr17 12329658 12329681 -73108799 + AT_rich Low_complexity Low_complexity 1 23 0 2860 152 46 29 chr17 12329687 12330213 -73108267 - L1PB4 LINE L1 -14 6142 5608 5804 239 56 49 chr17 12330835 12333813 -73104667 - L1ME1 LINE L1 -6 6160 3161 180 0 0 0 chr17 12333814 12333834 -73104646 + (A)n Simple_repeat Simple_repeat 1 20 0 1578 175 0 25 chr17 12333836 12334121 -73104359 - AluJo SINE Alu -34 278 1 322 264 24 48 chr17 12334130 12334255 -73104225 - L1ME1 LINE L1 -2959 3187 3066 234 232 145 0 chr17 12334964 12335033 -73103447 - MLT1J LTR MaLR -201 310 232 226 242 73 40 chr17 12335209 12335333 -73103147 - L1P2 LINE L1 -658 5497 5370 275 320 0 0 chr17 12335712 12335809 -73102671 - L1P2 LINE L1 -1200 4946 4850 440 277 127 27 chr17 12335907 12336239 -73102241 - L1M4 LINE L1 -1447 4699 4335 196 228 41 98 chr17 12336345 12336468 -73102012 - L3 LINE CR1 -75 1502 1387 330 310 148 25 chr17 12336713 12336916 -73101564 - MIR SINE MIR -34 228 1 21 0 0 0 chr17 12337364 12337385 -73101095 + AT_rich Low_complexity Low_complexity 1 21 0 461 315 74 25 chr17 12337917 12338120 -73100360 - L2 LINE L2 -92 3221 3009 210 118 0 0 chr17 12338142 12338176 -73100304 + (T)n Simple_repeat Simple_repeat 1 34 0 35 71 0 0 chr17 12339563 12339633 -73098847 + AT_rich Low_complexity Low_complexity 1 70 0 503 316 156 5 chr17 12339776 12339994 -73098486 - MIR SINE MIR -1 261 11 1098 166 43 11 chr17 12340620 12340807 -73097673 + AluJo SINE Alu 1 193 -119 21 57 0 0 chr17 12340875 12340910 -73097570 + AT_rich Low_complexity Low_complexity 1 35 0 209 292 0 0 chr17 12342215 12342280 -73096200 + T-rich Low_complexity Low_complexity 1 65 0 239 243 87 19 chr17 12342497 12342600 -73095880 - MLT1L LTR MaLR -6 609 500 2222 112 3 10 chr17 12342956 12343260 -73095220 + AluSx SINE Alu 1 302 -10 270 0 0 0 chr17 12345162 12345192 -73093288 + (TG)n Simple_repeat Simple_repeat 2 31 0 1573 135 56 0 chr17 12346030 12346296 -73092184 - Tigger3b DNA MER2_type 0 1231 951 4291 126 152 2 chr17 12347013 12347854 -73090626 - Tigger3b DNA MER2_type -262 969 3 393 242 27 0 chr17 12347883 12348007 -73090473 - L1MC4 LINE L1 -152 7890 7654 16053 123 14 40 chr17 12348022 12349944 -73088536 + Tigger4(Zombi) DNA MER2_type 5 1974 -757 5421 110 30 29 chr17 12349944 12350944 -73087536 + L1PA13 LINE L1 5164 6161 -2 2135 121 3 34 chr17 12350953 12351275 -73087205 + AluSx SINE Alu 1 312 0 16053 123 14 40 chr17 12351275 12352140 -73086340 + Tigger4(Zombi) DNA MER2_type 1982 2731 0 1193 22 0 0 chr17 12352232 12352369 -73086111 + AluY SINE Alu 165 301 -10 364 298 101 22 chr17 12352421 12352599 -73085881 - L1MC4 LINE L1 -446 7596 7405 388 227 31 8 chr17 12352662 12352790 -73085690 - L1M4 LINE L1 -1623 4523 4393 2565 103 73 11 chr17 12352790 12353226 -73085254 + MER4C LTR ERV1 1 463 -2 272 237 8 59 chr17 12353257 12353375 -73085105 - L1M4 LINE L1 -1784 4362 4251 2909 259 102 16 chr17 12353398 12354787 -73083693 - L1M4 LINE L1 -1985 4161 2653 2361 79 0 7 chr17 12355444 12355748 -73082732 - AluY SINE Alu -8 303 2 1224 132 129 20 chr17 12356662 12356972 -73081508 - MSTA LTR MaLR 0 364 1 1717 163 22 47 chr17 12357146 12357509 -73080971 - MLT1A1 LTR MaLR -11 354 1 2376 80 0 0 chr17 12358849 12359151 -73079329 - AluY SINE Alu -9 302 1 238 325 12 24 chr17 12360384 12360467 -73078013 - MER5A DNA MER1_type -2 187 106 753 235 17 0 chr17 12361720 12361899 -73076581 + MER106A DNA MER1_type 2 183 -53 2080 124 16 7 chr17 12362012 12362319 -73076161 - AluSg SINE Alu 0 310 1 1571 250 75 36 chr17 12362406 12363323 -73075157 + L1ME3A LINE L1 5039 5987 -183 2668 109 55 63 chr17 12363429 12363845 -73074635 - MER84 LTR ERVI 0 507 93 2114 119 0 0 chr17 12363845 12364156 -73074324 - AluSx SINE Alu 0 311 1 2668 109 55 63 chr17 12364156 12364243 -73074237 - MER84 LTR ERVI -414 93 7 400 132 40 13 chr17 12364243 12364319 -73074161 - MER84 LTR ERVI -429 78 1 1717 158 0 85 chr17 12365672 12365850 -73072630 - AluJb SINE Alu -11 301 162 2209 101 16 0 chr17 12365850 12366158 -73072322 - AluSp SINE Alu 0 313 1 1717 158 0 85 chr17 12366158 12366308 -73072172 - AluJb SINE Alu -150 162 1 2117 121 0 0 chr17 12366331 12366620 -73071860 - AluSx SINE Alu -19 293 5 357 225 200 4 chr17 12366993 12367233 -73071247 + L1MEd LINE L1 739 1025 -5094 442 210 145 8 chr17 12367238 12367362 -73071118 + MER3 DNA MER1_type 10 150 -59 220 300 43 14 chr17 12367910 12367980 -73070500 + L2 LINE L2 3201 3272 0 534 302 119 41 chr17 12368141 12368528 -73069952 + L1MEd LINE L1 818 1234 -4885 29 28 0 0 chr17 12368575 12368611 -73069869 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr17 12368667 12368690 -73069790 + AT_rich Low_complexity Low_complexity 1 23 0 230 344 6 38 chr17 12368753 12368910 -73069570 + HAL1 LINE L1 1450 1601 -906 2485 137 51 12 chr17 12368985 12369400 -73069080 - Tigger2a DNA MER2_type -3 431 1 547 292 72 11 chr17 12369437 12369831 -73068649 - LTR16A LTR ERVL 0 450 1 23 54 0 0 chr17 12370286 12370323 -73068157 + AT_rich Low_complexity Low_complexity 1 37 0 292 319 83 25 chr17 12375384 12375541 -73062939 - MIR SINE MIR -54 208 43 1074 136 41 0 chr17 12375896 12376065 -73062415 - AluSp SINE Alu -4 309 134 2168 121 10 16 chr17 12376066 12376380 -73062100 - AluSq SINE Alu -1 312 1 2039 131 3 3 chr17 12377278 12377575 -73060905 - AluSq SINE Alu -16 297 1 250 268 54 18 chr17 12377753 12377865 -73060615 + MARNA DNA Mariner 240 355 -231 305 204 159 0 chr17 12378221 12378334 -73060146 - MIR SINE MIR -54 208 78 2847 71 23 18 chr17 12378370 12378766 -73059714 + L1PB1 LINE L1 5754 6151 0 270 350 127 27 chr17 12378790 12379090 -73059390 - L2 LINE L2 -455 2859 2530 233 344 43 54 chr17 12379172 12379358 -73059122 + L2 LINE L2 2867 3050 -222 2597 11 0 0 chr17 12379941 12380223 -73058257 + AluYa5 SINE Alu 24 305 -6 239 270 0 0 chr17 12380280 12380343 -73058137 + MARNA DNA Mariner 312 374 -212 624 278 80 57 chr17 12380501 12380890 -73057590 + L1MEd LINE L1 318 715 -5404 22406 179 20 17 chr17 12380896 12386310 -73052170 + L1P4 LINE L1 7 6537 -1075 1750 149 0 44 chr17 12386310 12386649 -73051831 + AluSx SINE Alu 1 326 0 22406 179 20 17 chr17 12386649 12387340 -73051140 + L1P4 LINE L1 6537 7224 -388 1172 100 77 18 chr17 12387340 12387510 -73050970 + AluSg/x SINE Alu 131 310 0 452 194 194 69 chr17 12387511 12387743 -73050737 + L1MEd LINE L1 701 961 -5158 6893 151 39 43 chr17 12388148 12388348 -73050132 - L1MA4 LINE L1 -4 6296 6097 2375 157 51 10 chr17 12388348 12388757 -73049723 + MSTB LTR MaLR 1 426 0 6893 151 39 43 chr17 12388757 12390505 -73047975 - L1MA4 LINE L1 -203 6097 4359 1952 142 4 0 chr17 12390505 12390817 -73047663 - AluSx SINE Alu 0 313 1 6893 151 39 43 chr17 12390817 12391319 -73047161 - L1MA4 LINE L1 -1941 4359 3856 934 268 100 63 chr17 12391414 12392089 -73046391 - L1ME LINE L1 -339 5823 5174 2342 79 3 0 chr17 12392089 12392381 -73046099 + AluSp SINE Alu 1 293 -20 934 268 100 63 chr17 12392381 12392450 -73046030 - L1ME LINE L1 -988 5174 5109 6039 117 15 0 chr17 12392450 12393098 -73045382 - L1PA16 LINE L1 -9 6157 5520 207 0 0 0 chr17 12393098 12393121 -73045359 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1904 117 34 0 chr17 12393122 12393388 -73045092 - AluSc SINE Alu -31 278 4 6039 117 15 0 chr17 12393388 12394076 -73044404 - L1PA16 LINE L1 -645 5521 4802 934 268 100 63 chr17 12394076 12394482 -73043998 - L1ME LINE L1 -1053 5109 4634 * 2612 191 44 68 chr17 12394475 12395154 -73043326 - L1MB8 LINE L1 -6 6983 6321 1137 236 94 45 chr17 12395160 12395512 -73042968 - L1MB8 LINE L1 -1096 5861 5493 2621 153 24 24 chr17 12395514 12395938 -73042542 - MSTB LTR MaLR 0 426 3 9052 165 51 24 chr17 12395939 12397543 -73040937 - MSTB-int LTR MaLR 0 1651 5 1960 148 62 72 chr17 12397547 12398014 -73040466 - MSTB LTR MaLR 0 457 12 3821 216 128 104 chr17 12398014 12398316 -73040164 - L1MB8 LINE L1 -1463 5494 5201 2033 152 0 9 chr17 12398316 12398631 -73039849 - AluSx SINE Alu 0 312 1 3821 216 128 104 chr17 12398631 12398672 -73039808 - L1MB8 LINE L1 -1756 5201 5162 732 74 0 0 chr17 12398672 12398780 -73039700 + (TTCC)n Simple_repeat Simple_repeat 4 111 0 1780 142 7 11 chr17 12398784 12399059 -73039421 - AluJb SINE Alu -38 274 1 3821 216 128 104 chr17 12399059 12399249 -73039231 - L1MB8 LINE L1 -1797 5160 4976 1747 171 0 21 chr17 12399249 12399567 -73038913 - AluSx SINE Alu 0 312 1 3821 216 128 104 chr17 12399567 12399639 -73038841 - L1MB8 LINE L1 -1981 4976 4907 991 89 0 0 chr17 12399639 12399763 -73038717 - AluSp SINE Alu -189 124 1 3821 216 128 104 chr17 12399763 12400992 -73037488 - L1MB8 LINE L1 -2050 4907 3480 423 203 93 17 chr17 12400996 12401114 -73037366 - L1MB8 LINE L1 -6659 200 74 * 2523 167 20 28 chr17 12401110 12401383 -73037097 - L1MA7 LINE L1 -237 6054 5780 908 92 43 0 chr17 12401383 12401547 -73036933 + CT-rich Low_complexity Low_complexity 2 172 0 1831 112 58 0 chr17 12401547 12401806 -73036674 - AluSc SINE Alu -35 274 1 2523 167 20 28 chr17 12401806 12402034 -73036446 - L1MA7 LINE L1 -509 5782 5556 2081 210 51 60 chr17 12402032 12403160 -73035320 - L1M4c LINE L1 -4694 2265 1182 * 553 219 0 19 chr17 12403160 12403265 -73035215 - FRAM SINE Alu -73 103 1 789 247 158 42 chr17 12403306 12403386 -73035094 - L1M4 LINE L1 -2700 3446 3377 2445 75 3 0 chr17 12403386 12403681 -73034799 - AluY SINE Alu -15 296 1 789 247 158 42 chr17 12403681 12404245 -73034235 - L1M4 LINE L1 -2769 3377 2695 2107 121 3 17 chr17 12404245 12404542 -73033938 + AluSp SINE Alu 1 293 -20 789 247 158 42 chr17 12404542 12404672 -73033808 - L1M4 LINE L1 -3451 2695 2581 830 149 0 8 chr17 12404713 12404847 -73033633 + L1PA16 LINE L1 5592 5724 -442 1858 177 16 0 chr17 12404850 12405160 -73033320 + L1PA16 LINE L1 5846 6160 -6 2109 110 11 0 chr17 12405499 12405781 -73032699 - AluSc SINE Alu -24 285 1 290 278 91 68 chr17 12405783 12406269 -73032211 + L1ME3A LINE L1 3121 3617 -2529 2462 70 3 0 chr17 12406285 12406583 -73031897 - AluY SINE Alu -12 299 1 341 300 95 42 chr17 12406598 12406861 -73031619 + L1ME3A LINE L1 4800 5076 -1070 628 239 81 140 chr17 12406862 12406955 -73031525 + L1ME3A LINE L1 5258 5355 -815 2062 113 27 7 chr17 12406955 12407247 -73031233 - AluSx SINE Alu -14 298 1 628 239 81 140 chr17 12407247 12407909 -73030571 + L1ME3A LINE L1 5355 5968 -202 1937 159 10 0 chr17 12408048 12408356 -73030124 - AluJb SINE Alu -1 311 1 555 128 23 0 chr17 12408488 12408574 -73029906 + L1M4c LINE L1 15 102 -6282 2065 112 14 0 chr17 12408579 12408865 -73029615 + AluSq SINE Alu 1 290 -23 800 128 0 40 chr17 12408874 12408999 -73029481 + Tigger1 DNA MER2_type 2299 2418 0 1714 165 0 21 chr17 12409014 12409299 -73029181 - AluJo SINE Alu -33 279 1 391 132 105 0 chr17 12409306 12409382 -73029098 + L1MB4 LINE L1 6097 6180 0 265 335 19 19 chr17 12410127 12410285 -73028195 + L1M4c LINE L1 309 466 -5906 235 253 108 0 chr17 12410289 12410372 -73028108 + L1MC3 LINE L1 6084 6175 -1610 195 352 44 0 chr17 12410382 12410473 -73028007 + MIR SINE MIR 20 114 -148 4028 24 20 0 chr17 12410480 12410932 -73027548 - L1PA4 LINE L1 -3 6152 5692 675 262 116 30 chr17 12411345 12411578 -73026902 + MIR SINE MIR 8 260 -2 404 341 43 7 chr17 12411721 12411859 -73026621 - MIR3 SINE MIR -29 179 37 1463 272 84 4 chr17 12412186 12412683 -73025797 + L2 LINE L2 2169 2705 -609 2029 102 0 64 chr17 12412693 12413007 -73025473 + AluSg SINE Alu 1 294 -16 1169 226 4 9 chr17 12413101 12413331 -73025149 + MLT1A1 LTR MaLR 1 229 -136 313 236 0 0 chr17 12413330 12413385 -73025095 - Tigger3b DNA MER2_type -1176 55 1 * 482 159 396 0 chr17 12413385 12413462 -73025018 - L1M4b LINE L1 -1982 4975 4930 1916 86 4 8 chr17 12413462 12413717 -73024763 - AluSx SINE Alu -58 254 1 482 159 396 0 chr17 12413717 12413821 -73024659 - L1M4b LINE L1 -2027 4930 4722 1600 275 60 7 chr17 12413857 12414322 -73024158 - MER21B LTR ERV1 -62 801 312 2167 89 18 4 chr17 12414325 12414625 -73023855 - AluSx SINE Alu 0 304 1 2400 83 3 0 chr17 12414729 12415029 -73023451 + AluSx SINE Alu 1 301 -11 1067 199 29 126 chr17 12415029 12415370 -73023110 - MER21B LTR ERV1 -555 308 1 3598 244 26 88 chr17 12415370 12415694 -73022786 - L1M4b LINE L1 -2234 4723 4380 333 0 0 0 chr17 12415694 12415731 -73022749 + (TG)n Simple_repeat Simple_repeat 2 38 0 3598 244 26 88 chr17 12415731 12417134 -73021346 - L1M4b LINE L1 -2577 4380 2891 1998 144 10 3 chr17 12417134 12417432 -73021048 - AluJb SINE Alu -12 300 1 3598 244 26 88 chr17 12417432 12417443 -73021037 - L1M4b LINE L1 -4066 2891 2881 1537 131 58 4 chr17 12417443 12417703 -73020777 - L1MA3 LINE L1 -2 6303 6030 3598 244 26 88 chr17 12417703 12418234 -73020246 - L1M4b LINE L1 -4076 2881 2471 6442 230 50 46 chr17 12418412 12420135 -73018345 - L1M4b LINE L1 -4543 2416 701 1557 171 80 85 chr17 12420135 12420533 -73017947 - MSTD LTR MaLR 0 396 1 6442 230 50 46 chr17 12420533 12420972 -73017508 - L1M4b LINE L1 -6258 701 208 2369 63 3 10 chr17 12420972 12421272 -73017208 + AluY SINE Alu 1 298 -13 6442 230 50 46 chr17 12421272 12421468 -73017012 - L1M4b LINE L1 -6751 208 14 279 93 0 0 chr17 12421532 12421575 -73016905 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 2086 142 0 3 chr17 12421654 12421965 -73016515 + AluSx SINE Alu 1 310 -2 838 312 73 30 chr17 12422005 12422594 -73015886 - L1M4 LINE L1 -1918 4228 3666 285 29 0 0 chr17 12422594 12422628 -73015852 + (TG)n Simple_repeat Simple_repeat 1 34 0 838 312 73 30 chr17 12422628 12423117 -73015363 - L1M4 LINE L1 -2480 3666 3103 439 194 271 21 chr17 12423418 12423562 -73014918 + MER5A DNA MER1_type 9 188 -1 322 329 12 0 chr17 12423562 12423638 -73014842 - MIR3 SINE MIR -50 158 82 239 226 0 48 chr17 12423668 12423730 -73014750 + GA-rich Low_complexity Low_complexity 2 60 0 213 295 118 114 chr17 12424562 12425095 -73013385 + L2 LINE L2 2245 2783 -531 3417 92 2 33 chr17 12425095 12425583 -73012897 + L1PB1 LINE L1 5679 6151 0 213 295 118 114 chr17 12425583 12425777 -73012703 + L2 LINE L2 2783 2975 -339 558 231 0 0 chr17 12426078 12426247 -73012233 + (TG)n Simple_repeat Simple_repeat 1 169 0 401 283 7 0 chr17 12426264 12426416 -73012064 + (TG)n Simple_repeat Simple_repeat 2 154 0 2563 62 0 0 chr17 12427080 12427384 -73011096 - AluY SINE Alu -7 304 1 194 243 0 0 chr17 12427646 12427683 -73010797 + L2 LINE L2 3005 3041 -272 2364 164 48 40 chr17 12427750 12428020 -73010460 + MER66B LTR ERV1 7 285 -201 1997 146 0 0 chr17 12428020 12428350 -73010130 + AluSx SINE Alu 1 330 0 2364 164 48 40 chr17 12428350 12428554 -73009926 + MER66B LTR ERV1 285 486 0 2399 91 0 3 chr17 12428672 12428981 -73009499 + AluSg SINE Alu 1 308 -2 349 239 46 55 chr17 12429219 12429328 -73009152 - L2 LINE L2 -2 3311 3204 979 237 30 92 chr17 12429393 12429731 -73008749 + MER102b DNA MER1_type 15 331 -10 2302 192 45 18 chr17 12430676 12431165 -73007315 + L1ME1 LINE L1 5538 6039 -127 754 212 30 30 chr17 12431163 12431263 -73007217 - L1M4 LINE L1 -1108 5038 4939 * 234 0 0 0 chr17 12431263 12431289 -73007191 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 754 212 30 30 chr17 12431289 12431391 -73007089 - L1M4 LINE L1 -1206 4940 4836 804 261 44 4 chr17 12431519 12431745 -73006735 - MIR SINE MIR -1 261 27 206 256 0 0 chr17 12431783 12431822 -73006658 + MIR SINE MIR 217 255 -7 198 307 27 13 chr17 12431942 12432017 -73006463 - L2 LINE L2 -15 3257 3182 205 281 0 67 chr17 12432151 12432240 -73006240 + MIR SINE MIR 109 191 -71 388 257 35 44 chr17 12432777 12432890 -73005590 - L2 LINE L2 0 3272 3161 2281 151 6 0 chr17 12433454 12433804 -73004676 + MLT1A1 LTR MaLR 14 365 0 930 161 39 39 chr17 12433822 12434027 -73004453 - L1MB4 LINE L1 0 6180 5976 1618 181 38 0 chr17 12434268 12434555 -73003925 - AluJo SINE Alu -3 309 12 1944 144 3 3 chr17 12434592 12434883 -73003597 - AluJb SINE Alu -21 291 1 1934 96 8 15 chr17 12435335 12435596 -73002884 - AluSc SINE Alu -11 298 40 180 111 0 0 chr17 12435596 12435623 -73002857 + (T)n Simple_repeat Simple_repeat 1 27 0 1833 189 3 0 chr17 12435623 12435956 -73002524 - L1MC3 LINE L1 0 7785 7452 2412 89 3 0 chr17 12435986 12436288 -73002192 + AluSp SINE Alu 1 303 -10 2423 97 0 0 chr17 12436634 12436945 -73001535 - AluSq SINE Alu -2 311 1 2387 69 0 13 chr17 12437897 12438200 -73000280 - AluY SINE Alu -11 300 2 560 308 87 21 chr17 12438490 12438779 -72999701 + L2 LINE L2 2852 3159 -154 271 160 13 40 chr17 12438786 12438861 -72999619 + (TA)n Simple_repeat Simple_repeat 1 73 0 894 211 97 0 chr17 12438861 12439046 -72999434 - AluJo SINE Alu -23 289 87 180 111 0 0 chr17 12439127 12439154 -72999326 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 221 330 68 10 chr17 12439351 12439454 -72999026 - L2 LINE L2 -227 3045 2937 2238 256 56 42 chr17 12439454 12440188 -72998292 + HsTC2a DNA MER2_type 1 744 0 542 242 0 6 chr17 12441165 12441322 -72997158 + CT-rich Low_complexity Low_complexity 1 156 0 411 276 26 0 chr17 12441654 12441771 -72996709 - MIR SINE MIR -56 152 23 2133 142 0 0 chr17 12442308 12442617 -72995863 - AluSx SINE Alu -3 309 1 802 158 7 7 chr17 12442718 12442857 -72995623 + MIR SINE MIR 65 203 -59 250 200 0 17 chr17 12442909 12442969 -72995511 - L1MEd LINE L1 -4868 1251 1193 2050 154 19 50 chr17 12443001 12443153 -72995327 + MLT1A1 LTR MaLR 1 156 -209 2273 113 0 3 chr17 12443153 12443455 -72995025 + AluSx SINE Alu 1 301 -11 2050 154 19 50 chr17 12443455 12443679 -72994801 + MLT1A1 LTR MaLR 156 365 0 362 265 60 11 chr17 12443854 12444001 -72994479 + MLT1J2 LTR MaLR 32 154 -296 180 297 69 30 chr17 12444057 12444158 -72994322 + MER5C DNA MER1_type 2 106 -218 201 200 43 14 chr17 12444197 12444267 -72994213 + MER5C DNA MER1_type 208 279 -45 297 254 46 31 chr17 12444312 12444442 -72994038 + MLT1J LTR MaLR 325 456 -55 23 54 0 0 chr17 12444554 12444591 -72993889 + AT_rich Low_complexity Low_complexity 1 37 0 1008 83 0 0 chr17 12444793 12444914 -72993566 + AluSp SINE Alu 103 223 -90 1666 171 42 90 chr17 12445185 12445450 -72993030 - MLT1C LTR MaLR -32 435 200 2089 142 0 3 chr17 12445450 12445746 -72992734 - AluSx SINE Alu -17 295 1 1666 171 42 90 chr17 12445746 12445937 -72992543 - MLT1C LTR MaLR -267 200 1 229 307 148 10 chr17 12446872 12446973 -72991507 + MIR3 SINE MIR 88 202 -6 306 77 0 0 chr17 12446998 12447037 -72991443 - AluSp SINE Alu -135 168 130 1562 168 119 6 chr17 12448122 12448450 -72990030 + MLT1A1 LTR MaLR 1 365 0 1842 78 0 47 chr17 12448516 12448774 -72989706 + AluSg SINE Alu 1 246 -64 198 103 0 0 chr17 12448774 12448803 -72989677 + (A)n Simple_repeat Simple_repeat 1 29 0 437 244 61 1 chr17 12449672 12449796 -72988684 + MIR3 SINE MIR 67 200 -8 182 227 152 30 chr17 12449810 12449876 -72988604 + L3b LINE CR1 1257 1330 -253 23 0 0 0 chr17 12450270 12450293 -72988187 + AT_rich Low_complexity Low_complexity 1 23 0 1687 203 98 21 chr17 12450314 12450783 -72987697 + MLT1D LTR MaLR 1 505 0 2149 186 9 9 chr17 12451072 12451492 -72986988 - LTR9B LTR ERV1 0 644 225 4028 122 60 35 chr17 12451495 12452324 -72986156 + pTR5 LTR ERV1 743 1592 -846 182 211 0 0 chr17 12452447 12452485 -72985995 - MIR SINE MIR -118 144 107 2443 58 0 0 chr17 12453828 12454119 -72984361 - AluY SINE Alu -20 291 1 23 33 0 0 chr17 12454636 12454666 -72983814 + AT_rich Low_complexity Low_complexity 1 30 0 2435 69 0 3 chr17 12457652 12457955 -72980525 + AluY SINE Alu 1 302 -9 265 68 120 0 chr17 12458249 12458366 -72980114 + (TA)n Simple_repeat Simple_repeat 2 132 0 197 114 49 57 chr17 12458336 12458459 -72980021 + (TTATA)n Simple_repeat Simple_repeat 3 124 0 * 198 0 0 0 chr17 12459225 12459247 -72979233 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 2090 106 7 3 chr17 12459716 12460037 -72978443 + AluSx SINE Alu 1 322 0 404 343 48 12 chr17 12465966 12466132 -72972348 - MER5B DNA MER1_type -6 172 1 722 255 6 6 chr17 12467287 12467448 -72971032 + MLT1E LTR MaLR 1 161 -432 384 213 14 72 chr17 12467643 12467801 -72970679 + L1MB8 LINE L1 6022 6176 -2 973 111 26 0 chr17 12468331 12468484 -72969996 + L1MA2 LINE L1 6148 6304 0 344 233 35 17 chr17 12468632 12468748 -72969732 + MLT1J LTR MaLR 1 118 -393 1139 200 61 61 chr17 12468751 12469111 -72969369 + MLT1B LTR MaLR 4 363 -27 607 266 65 47 chr17 12469209 12469487 -72968993 + MLT1J LTR MaLR 229 511 0 291 297 22 0 chr17 12469561 12469652 -72968828 + MER20B DNA MER1_type 65 157 -626 516 96 0 0 chr17 12469695 12469768 -72968712 + U3 snRNA snRNA 1 73 -144 229 143 41 0 chr17 12469972 12470021 -72968459 + (CA)n Simple_repeat Simple_repeat 2 52 0 423 0 0 0 chr17 12470537 12470584 -72967896 + (CA)n Simple_repeat Simple_repeat 2 48 0 2102 270 94 15 chr17 12471865 12472787 -72965693 + L1MEc LINE L1 56 1050 -5346 2233 103 0 3 chr17 12472792 12473093 -72965387 + AluSg SINE Alu 1 300 -10 635 201 28 14 chr17 12473104 12473248 -72965232 + L1MA10 LINE L1 6179 6324 -10 431 241 0 35 chr17 12474568 12474684 -72963796 - L3 LINE CR1 -1133 444 333 720 232 140 48 chr17 12475642 12476021 -72962459 + MLT1C LTR MaLR 54 467 0 490 175 38 8 chr17 12476031 12476205 -72962275 - MER58A DNA MER1_type 0 224 6 558 0 0 0 chr17 12476911 12476973 -72961507 + (TA)n Simple_repeat Simple_repeat 2 63 0 536 332 41 108 chr17 12477703 12479122 -72959358 + L2 LINE L2 1947 3271 -1 370 219 12 21 chr17 12479343 12479503 -72958977 + MER20 DNA MER1_type 1 214 -5 362 219 65 49 chr17 12479604 12479727 -72958753 + L1MC/D LINE L1 5685 5809 -1999 1769 140 16 42 chr17 12479746 12479887 -72958593 + AluSx SINE Alu 5 148 -164 2315 32 43 0 chr17 12479887 12480168 -72958312 + AluY SINE Alu 1 293 -18 1769 140 16 42 chr17 12480168 12480334 -72958146 + AluSx SINE Alu 148 304 -8 952 97 15 0 chr17 12481130 12481264 -72957216 + AluSq/x SINE Alu 1 136 -176 2281 106 0 3 chr17 12481264 12481567 -72956913 + AluSx SINE Alu 1 302 -10 306 0 0 0 chr17 12481571 12481605 -72956875 + (TAA)n Simple_repeat Simple_repeat 2 35 0 2716 231 42 27 chr17 12481640 12482481 -72955999 - L1ME2 LINE L1 -2 6162 5302 971 194 227 12 chr17 12482481 12482723 -72955757 + AluJo SINE Alu 1 294 -8 2716 231 42 27 chr17 12482723 12482817 -72955663 - L1ME2 LINE L1 -862 5302 5211 222 171 0 0 chr17 12482817 12482858 -72955622 + CT-rich Low_complexity Low_complexity 1 41 0 1917 157 4 0 chr17 12482893 12483173 -72955307 - AluSq SINE Alu -32 281 1 1393 213 73 60 chr17 12483173 12483802 -72954678 - L1ME2 LINE L1 -941 5205 4569 226 382 0 0 chr17 12483908 12483984 -72954496 + G-rich Low_complexity Low_complexity 5 80 0 638 235 84 112 chr17 12484001 12484237 -72954243 + HAL1 LINE L1 1408 1649 -858 1672 161 39 7 chr17 12484237 12484522 -72953958 + AluJo SINE Alu 1 294 -18 638 235 84 112 chr17 12484522 12484859 -72953621 + HAL1 LINE L1 1649 1965 -542 239 250 113 0 chr17 12484876 12484956 -72953524 + HAL1 LINE L1 2035 2123 -384 2277 170 20 27 chr17 12485583 12486070 -72952410 + L1MB3 LINE L1 5700 6183 0 270 81 0 0 chr17 12486098 12486135 -72952345 + (CA)n Simple_repeat Simple_repeat 1 37 0 1732 135 49 21 chr17 12486680 12486968 -72951512 - AluJb SINE Alu -16 296 1 537 198 147 30 chr17 12488044 12488241 -72950239 + L1MC5 LINE L1 7631 7850 -111 894 135 0 0 chr17 12488499 12488632 -72949848 + FLAM_C SINE Alu 1 133 0 203 209 30 104 chr17 12488704 12488771 -72949709 + MIR SINE MIR 20 81 -181 325 279 115 44 chr17 12489051 12489441 -72949039 + HAL1 LINE L1 1060 1477 -1030 293 152 0 0 chr17 12493742 12493788 -72944692 + MLT1D-int LTR MaLR 987 1032 -339 * 527 223 42 58 chr17 12493786 12493987 -72944493 + MLT1D-int LTR MaLR 1237 1371 0 375 256 34 26 chr17 12493987 12494104 -72944376 + MLT1D LTR MaLR 1 118 -387 191 260 41 55 chr17 12495434 12495507 -72942973 + L2 LINE L2 3200 3271 -1 252 239 0 0 chr17 12495548 12495594 -72942886 + LTR67 LTR ERVL 506 551 -6 204 289 0 67 chr17 12496511 12496601 -72941879 + L2 LINE L2 3185 3268 -4 1070 244 19 40 chr17 12496977 12497301 -72941179 + MLT1H LTR MaLR 3 319 -230 2199 98 0 0 chr17 12497907 12498226 -72940254 + AluSq SINE Alu 1 319 0 835 168 0 0 chr17 12498696 12498827 -72939653 + FLAM_C SINE Alu 1 131 -2 228 329 81 34 chr17 12498951 12499100 -72939380 + MIR SINE MIR 106 261 -1 483 249 40 35 chr17 12499320 12499486 -72938994 + MIR SINE MIR 18 179 -63 2414 62 3 0 chr17 12550918 12551206 -72887274 + AluY SINE Alu 13 301 -10 21 36 0 0 chr17 12551426 12551454 -72887026 + AT_rich Low_complexity Low_complexity 1 28 0 2135 82 37 10 chr17 12552293 12552587 -72885893 + AluSg1 SINE Alu 1 302 -7 2078 112 3 3 chr17 12552597 12552882 -72885598 + AluSp SINE Alu 1 285 -28 2149 110 4 0 chr17 12554098 12554426 -72884054 - AluSc SINE Alu 0 329 1 403 264 84 50 chr17 12554495 12554896 -72883584 + MLT1G1 LTR MaLR 39 482 -113 1633 214 97 7 chr17 12554903 12555324 -72883156 - MLT1C LTR MaLR -8 459 1 302 277 50 25 chr17 12555324 12555440 -72883040 + MLT1G1 LTR MaLR 477 595 0 247 263 20 20 chr17 12556909 12557008 -72881472 - LTR16A1 LTR ERVL 0 457 359 220 293 85 0 chr17 12557094 12557176 -72881304 + MIR SINE MIR 20 108 -100 802 269 81 27 chr17 12557762 12558060 -72880420 - L2 LINE L2 -1 3312 2999 423 0 0 0 chr17 12558076 12558123 -72880357 + (TG)n Simple_repeat Simple_repeat 1 47 0 837 205 54 0 chr17 12558229 12558395 -72880085 + MER5B DNA MER1_type 1 175 -3 1824 221 7 38 chr17 12558429 12558790 -72879690 + MLT2D LTR ERVL 3 351 -63 2209 116 3 0 chr17 12558790 12559091 -72879389 + AluSg SINE Alu 1 302 -8 1824 221 7 38 chr17 12559091 12559154 -72879326 + MLT2D LTR ERVL 351 414 0 494 276 71 34 chr17 12559154 12559229 -72879251 - L2 LINE L2 -569 2745 2674 1694 174 111 38 chr17 12559229 12559653 -72878827 + MSTB2 LTR MaLR 1 455 -2 494 276 71 34 chr17 12559653 12559816 -72878664 - L2 LINE L2 -640 2674 2498 1694 188 79 9 chr17 12560685 12561026 -72877454 + MLT1A1 LTR MaLR 1 365 0 256 265 44 0 chr17 12561184 12561252 -72877228 - L2 LINE L2 -7 3265 3195 328 169 12 12 chr17 12561643 12561726 -72876754 + (TA)n Simple_repeat Simple_repeat 1 83 0 1688 174 51 21 chr17 12561769 12562103 -72876377 + MER2 DNA MER2_type 1 344 0 35 54 0 0 chr17 12562192 12562248 -72876232 + AT_rich Low_complexity Low_complexity 1 56 0 2257 70 6 57 chr17 12562720 12563036 -72875444 + AluY SINE Alu 1 300 -11 492 332 79 30 chr17 12563073 12563678 -72874802 + L1M4 LINE L1 2765 3399 -2747 24 0 0 0 chr17 12564022 12564046 -72874434 + AT_rich Low_complexity Low_complexity 1 24 0 233 308 43 26 chr17 12565030 12565147 -72873333 - L2 LINE L2 -1 3271 3153 430 113 127 0 chr17 12565589 12565660 -72872820 + MADE1 DNA Mariner 1 80 0 2377 70 3 10 chr17 12566346 12566645 -72871835 - AluY SINE Alu -14 297 1 1557 106 0 5 chr17 12566674 12566881 -72871599 + AluSg/x SINE Alu 92 297 -15 475 286 16 81 chr17 12566881 12566981 -72871499 + MER5A DNA MER1_type 17 122 -67 1989 146 3 0 chr17 12566981 12567275 -72871205 + AluSx SINE Alu 1 295 -17 2269 72 23 20 chr17 12567275 12567579 -72870901 + AluY SINE Alu 1 305 -6 475 286 16 81 chr17 12567579 12567662 -72870818 + MER5A DNA MER1_type 120 189 0 414 283 0 0 chr17 12569011 12569170 -72869310 + (TG)n Simple_repeat Simple_repeat 1 159 0 2166 107 9 28 chr17 12570066 12570383 -72868097 - AluSx SINE Alu -1 311 1 2091 83 38 10 chr17 12571065 12571354 -72867126 + AluSg1 SINE Alu 1 297 -12 2466 84 3 3 chr17 12571364 12571672 -72866808 + AluSp SINE Alu 1 308 -5 2453 191 62 28 chr17 12571674 12571968 -72866512 - L1MA9 LINE L1 -38 6274 5991 2020 140 0 10 chr17 12571968 12572276 -72866204 - AluSx SINE Alu -7 305 1 2453 191 62 28 chr17 12572276 12572579 -72865901 - L1MA9 LINE L1 -321 5991 5657 1798 226 108 10 chr17 12572743 12573226 -72865254 + MER74A LTR ERVL 1 530 -28 21 0 0 0 chr17 12573434 12573455 -72865025 + AT_rich Low_complexity Low_complexity 1 21 0 2266 102 13 3 chr17 12573460 12573763 -72864717 + AluSg SINE Alu 1 306 -4 1274 103 6 0 chr17 12574564 12574729 -72863751 - AluSq SINE Alu -14 299 134 2238 113 0 13 chr17 12574729 12575039 -72863441 - AluSx SINE Alu -6 306 1 2016 88 4 0 chr17 12575039 12575311 -72863169 - L1PB1 LINE L1 -59 6092 5820 984 202 17 17 chr17 12575494 12575732 -72862748 - MER74A LTR ERVL -149 409 172 354 245 11 21 chr17 12576228 12576322 -72862158 + MER5B DNA MER1_type 1 93 -85 1701 186 21 53 chr17 12577420 12577643 -72860837 - MLT1A1 LTR MaLR 0 365 157 2141 138 0 7 chr17 12577643 12577941 -72860539 - AluSx SINE Alu -16 296 1 1701 186 21 53 chr17 12577941 12578094 -72860386 - MLT1A1 LTR MaLR -208 157 1 298 294 114 27 chr17 12578171 12578355 -72860125 - MIR SINE MIR -12 250 51 779 328 91 11 chr17 12578491 12579021 -72859459 - L2 LINE L2 -4 3309 2737 841 202 32 128 chr17 12579031 12579102 -72859378 - L1ME1 LINE L1 -5 6161 6085 2412 165 34 0 chr17 12579102 12579514 -72858966 - MSTB LTR MaLR 0 426 1 841 202 32 128 chr17 12579514 12579754 -72858726 - L1ME1 LINE L1 -81 6085 5880 * 2498 235 71 40 chr17 12579738 12580710 -72857770 - L1M4 LINE L1 -2107 4039 3038 1307 230 122 68 chr17 12580710 12580787 -72857693 - L1MEc LINE L1 -5831 565 494 2362 78 3 0 chr17 12580787 12581082 -72857398 + AluY SINE Alu 1 296 -15 1307 230 122 68 chr17 12581082 12581338 -72857142 - L1MEc LINE L1 -5902 494 196 2453 79 3 0 chr17 12581338 12581643 -72856837 + AluSp SINE Alu 1 306 -7 1307 230 122 68 chr17 12581643 12581790 -72856690 - L1MEc LINE L1 -6200 196 58 906 284 95 31 chr17 12581821 12582462 -72856018 - L2 LINE L2 -568 2746 2065 221 297 99 0 chr17 12582515 12582626 -72855854 + L2 LINE L2 3116 3237 -35 339 25 0 0 chr17 12582634 12582674 -72855806 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 183 152 0 0 chr17 12584422 12584468 -72854012 + (CA)n Simple_repeat Simple_repeat 1 46 0 1710 212 3 54 chr17 12585249 12585640 -72852840 - MLT1A2 LTR MaLR 0 374 4 393 286 143 60 chr17 12585743 12586176 -72852304 + L2 LINE L2 2841 3309 -4 216 256 35 58 chr17 12586828 12586914 -72851566 - L2 LINE L2 -3 3269 3186 1641 163 14 3 chr17 12587885 12588179 -72850301 + L1MC1 LINE L1 6037 6333 0 1498 160 113 35 chr17 12588403 12588721 -72849759 - MER2 DNA MER2_type 0 344 2 2134 111 13 7 chr17 12589346 12589652 -72848828 - AluSg SINE Alu -2 308 1 291 28 0 0 chr17 12589654 12589690 -72848790 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 850 164 8 0 chr17 12589706 12589840 -72848640 - FRAM SINE Alu -41 135 1 218 186 0 0 chr17 12589951 12589994 -72848486 - MIR SINE MIR -147 115 73 479 297 32 43 chr17 12591072 12591257 -72847223 + LTR33 LTR ERVL 1 183 -338 2567 48 0 7 chr17 12591408 12591702 -72846778 - AluY SINE Alu -14 297 6 224 216 54 68 chr17 12593196 12593270 -72845210 - L2 LINE L2 -5 3308 3236 2548 50 0 0 chr17 12594582 12594880 -72843600 + AluY SINE Alu 1 298 -13 1848 113 0 0 chr17 12594981 12595267 -72843213 - AluSx SINE Alu 0 321 36 1927 182 25 4 chr17 12596265 12596724 -72841756 + MLT2B1 LTR ERVL 2 515 0 2179 179 47 7 chr17 12596766 12597169 -72841311 + MSTB1 LTR MaLR 1 419 -13 294 247 118 0 chr17 12597180 12597265 -72841215 - MIR SINE MIR -99 163 69 2112 107 0 0 chr17 12597337 12597617 -72840863 + AluSx SINE Alu 1 280 -32 334 256 22 11 chr17 12597749 12597839 -72840641 - MIR SINE MIR -167 95 5 195 232 0 0 chr17 12598245 12598301 -72840179 + (TA)n Simple_repeat Simple_repeat 1 56 0 309 310 9 18 chr17 12598372 12598485 -72839995 - MIR3 SINE MIR -3 205 94 308 268 52 88 chr17 12598722 12598916 -72839564 + MIR SINE MIR 76 262 0 570 264 92 0 chr17 12599636 12599799 -72838681 - MIR SINE MIR -5 257 80 4116 120 20 16 chr17 12600919 12601560 -72836920 - LTR9B LTR ERV1 0 644 1 213 94 0 0 chr17 12601616 12601648 -72836832 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4951 143 39 1 chr17 12602814 12603694 -72834786 + L1 LINE L1 4125 5037 -1109 493 7 119 34 chr17 12603716 12604166 -72834314 + (TA)n Simple_repeat Simple_repeat 1 488 0 386 140 53 12 chr17 12604166 12604337 -72834143 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 419 204 57 18 chr17 12604352 12604689 -72833791 + (CATAT)n Simple_repeat Simple_repeat 1 350 0 188 127 66 60 chr17 12604702 12604868 -72833612 + (CATAT)n Simple_repeat Simple_repeat 4 170 0 286 125 64 64 chr17 12604882 12605167 -72833313 + (CATAT)n Simple_repeat Simple_repeat 1 285 0 226 106 56 56 chr17 12605170 12605349 -72833131 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 125 14 14 chr17 12605315 12605387 -72833093 + (TAA)n Simple_repeat Simple_repeat 3 74 0 2308 89 52 3 chr17 12605399 12605898 -72832582 - L1P2 LINE L1 -553 5601 5062 2884 53 8 11 chr17 12605898 12606260 -72832220 + L1PA8 LINE L1 5792 6165 -7 303 331 57 62 chr17 12606265 12606796 -72831684 + L1M4 LINE L1 3759 4286 -1860 355 269 11 0 chr17 12606861 12606954 -72831526 - MIR SINE MIR -2 260 167 565 235 136 4 chr17 12607039 12607222 -72831258 + MIR SINE MIR 58 262 0 22 0 0 0 chr17 12607330 12607352 -72831128 + AT_rich Low_complexity Low_complexity 1 22 0 3415 170 59 12 chr17 12607356 12608182 -72830298 - L1MC1 LINE L1 -346 5987 5122 684 202 62 28 chr17 12608191 12608369 -72830111 + MER21B LTR ERV1 626 809 -54 8311 220 46 41 chr17 12608401 12611235 -72827245 - L1M4c LINE L1 -1725 4245 1382 180 0 0 0 chr17 12611236 12611256 -72827224 + (T)n Simple_repeat Simple_repeat 1 20 0 307 100 0 0 chr17 12611256 12611296 -72827184 - AluY SINE Alu -196 105 66 43135 30 21 1 chr17 12611311 12617340 -72821140 - L1PA2 LINE L1 -1 6154 3 3457 279 68 17 chr17 12617346 12617762 -72820718 - L1M4c LINE L1 -4641 1250 856 249 33 0 0 chr17 12617762 12617792 -72820688 + (TC)n Simple_repeat Simple_repeat 1 30 0 3457 279 68 17 chr17 12617792 12619218 -72819262 - L1M4c LINE L1 -5035 856 7 647 282 17 4 chr17 12619215 12619456 -72819024 - L1M4 LINE L1 -1762 4384 4141 * 311 311 40 128 chr17 12619864 12620394 -72818086 - L3 LINE CR1 -2 1575 1093 340 250 135 10 chr17 12620960 12621064 -72817416 - MIR3 SINE MIR -4 204 88 231 36 0 0 chr17 12621461 12621489 -72816991 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 442 221 64 50 chr17 12621739 12621879 -72816601 + L1MC4a LINE L1 5622 5763 -2045 258 264 14 14 chr17 12621978 12622050 -72816430 + CT-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr17 12622101 12622125 -72816355 + AT_rich Low_complexity Low_complexity 1 24 0 1220 255 153 98 chr17 12622292 12622696 -72815784 - L1MC4 LINE L1 -127 7681 7301 1890 194 0 44 chr17 12622696 12623103 -72815377 + MLT1B LTR MaLR 1 389 -1 1220 255 153 98 chr17 12623103 12624051 -72814429 - L1MC4 LINE L1 -507 7301 6275 330 274 61 71 chr17 12624127 12624339 -72814141 + L1MC4a LINE L1 5851 6060 -1748 257 153 0 17 chr17 12624892 12624951 -72813529 + CT-rich Low_complexity Low_complexity 1 58 0 990 203 54 56 chr17 12625208 12625570 -72812910 + MSTB2 LTR MaLR 3 447 -10 180 77 0 0 chr17 12625585 12625611 -72812869 + (TG)n Simple_repeat Simple_repeat 1 26 0 6118 139 21 26 chr17 12625979 12626412 -72812068 - L1MC1 LINE L1 0 6333 5900 2234 100 0 20 chr17 12626412 12626713 -72811767 - AluSx SINE Alu -17 295 1 6118 139 21 26 chr17 12626713 12626831 -72811649 - L1MC1 LINE L1 -433 5900 5783 2188 221 25 10 chr17 12626831 12627310 -72811170 + MER66B LTR ERV1 1 486 0 6118 139 21 26 chr17 12627310 12627972 -72810508 - L1MC1 LINE L1 -550 5783 5122 867 254 102 25 chr17 12628137 12628412 -72810068 + MLT1I LTR MaLR 114 409 0 312 335 206 0 chr17 12628948 12629118 -72809362 - MIR SINE MIR -11 251 47 24 0 0 0 chr17 12629696 12629720 -72808760 + AT_rich Low_complexity Low_complexity 1 24 0 415 239 57 45 chr17 12630116 12630292 -72808188 - L1ME4a LINE L1 0 6121 5944 354 299 112 22 chr17 12630355 12630579 -72807901 + MIR SINE MIR 17 260 -2 2416 74 0 0 chr17 12630651 12630947 -72807533 - AluSg1 SINE Alu -13 296 1 452 283 136 29 chr17 12630954 12631226 -72807254 - L1ME4a LINE L1 -297 5824 5524 1177 204 37 69 chr17 12631471 12631848 -72806632 - MLT1A1 LTR MaLR 0 365 1 938 186 39 20 chr17 12632145 12632349 -72806131 + MER3 DNA MER1_type 1 208 -1 264 216 0 0 chr17 12632307 12632358 -72806122 - MER3 DNA MER1_type -119 90 40 * 217 309 0 0 chr17 12632403 12632458 -72806022 + MIR SINE MIR 90 144 -64 188 385 0 0 chr17 12632447 12632512 -72805968 - MIR SINE MIR -92 116 52 * 1667 172 24 10 chr17 12632610 12632901 -72805579 - AluJo SINE Alu -17 295 1 517 299 120 25 chr17 12632953 12633194 -72805286 + L2 LINE L2 3050 3313 0 299 311 68 0 chr17 12633556 12633659 -72804821 + MIR SINE MIR 132 241 -21 183 80 0 0 chr17 12633923 12633948 -72804532 + (CCCTAA)n Simple_repeat Simple_repeat 1 25 0 26 64 0 0 chr17 12635067 12635114 -72803366 + AT_rich Low_complexity Low_complexity 1 47 0 3415 191 8 33 chr17 12635450 12635554 -72802926 - L1 LINE L1 -2299 3847 3742 2463 63 0 3 chr17 12635554 12635853 -72802627 - AluY SINE Alu -13 298 1 3415 191 8 33 chr17 12635853 12636595 -72801885 - L1 LINE L1 -2404 3742 3022 244 88 0 0 chr17 12636618 12636652 -72801828 - L1 LINE L1 -1374 4772 4739 2482 159 66 15 chr17 12636666 12637138 -72801342 + L1PA16 LINE L1 5669 6164 -2 22 35 0 0 chr17 12637138 12637167 -72801313 + AT_rich Low_complexity Low_complexity 1 29 0 1610 213 49 62 chr17 12637172 12637684 -72800796 + MLT1D LTR MaLR 1 505 0 269 143 14 57 chr17 12637854 12637924 -72800556 - L1ME LINE L1 -233 5888 5822 366 304 118 29 chr17 12637992 12638374 -72800106 - L1ME LINE L1 -439 5682 5267 219 69 0 0 chr17 12638624 12638653 -72799827 + (CA)n Simple_repeat Simple_repeat 1 29 0 180 77 0 0 chr17 12638654 12638680 -72799800 + (TATATG)n Simple_repeat Simple_repeat 5 30 0 328 205 12 118 chr17 12638959 12639120 -72799360 - MIR SINE MIR -30 232 89 1790 144 35 78 chr17 12639281 12639318 -72799162 - L1MA9 LINE L1 -346 5945 5908 1985 130 40 0 chr17 12639318 12639617 -72798863 + AluSx SINE Alu 1 311 -1 1790 144 35 78 chr17 12639617 12639953 -72798527 - L1MA9 LINE L1 -383 5908 5588 1315 180 57 70 chr17 12639951 12640062 -72798418 + L1MA9 LINE L1 5946 6057 -255 * 2316 101 0 3 chr17 12640062 12640368 -72798112 + AluSx SINE Alu 1 305 -7 1315 180 57 70 chr17 12640368 12640628 -72797852 + L1MA9 LINE L1 6057 6312 0 213 94 0 0 chr17 12640814 12640846 -72797634 + (CA)n Simple_repeat Simple_repeat 1 32 0 305 224 12 118 chr17 12641120 12641281 -72797199 - MIR SINE MIR -30 232 89 644 238 136 88 chr17 12642136 12642409 -72796071 + MER69 DNA AcHobo 283 568 -658 * 1044 175 99 21 chr17 12642407 12642790 -72795690 + MER69 DNA AcHobo 2010 2522 -4 2028 140 0 10 chr17 12643374 12643682 -72794798 - AluSx SINE Alu -7 305 1 325 38 0 38 chr17 12644050 12644103 -72794377 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 610 211 6 75 chr17 12644451 12644612 -72793868 - L2 LINE L2 0 3313 3164 1773 234 57 7 chr17 12644623 12645146 -72793334 + HsTC2 DNA Tc2 2 591 -1307 861 125 21 0 chr17 12645146 12645290 -72793190 + L1MA9 LINE L1 6162 6308 -4 1150 153 129 0 chr17 12645899 12646108 -72792372 + MER46A DNA MER2_type 1 236 0 448 255 40 20 chr17 12647433 12647582 -72790898 - L2 LINE L2 0 3313 3162 195 296 0 0 chr17 12647627 12647681 -72790799 + MIR SINE MIR 139 192 -70 258 375 46 13 chr17 12647911 12648063 -72790417 + MLT1K LTR MaLR 166 322 -266 2132 155 32 34 chr17 12648093 12648652 -72789828 - MLT2A2 LTR ERVL 0 554 1 519 273 160 0 chr17 12648751 12648901 -72789579 - MIR SINE MIR -73 189 16 2004 133 10 0 chr17 12649624 12649918 -72788562 - AluSg SINE Alu -13 297 1 223 400 69 12 chr17 12651196 12651356 -72787124 - L2 LINE L2 -4 3268 3100 206 254 51 0 chr17 12652196 12652255 -72786225 + MER5A DNA MER1_type 128 189 0 735 235 9 50 chr17 12652396 12652596 -72785884 + L1MD2 LINE L1 5080 5266 -891 2229 99 0 13 chr17 12652596 12652900 -72785580 - AluSq SINE Alu -13 300 1 735 235 9 50 chr17 12652900 12652968 -72785512 + L1MD2 LINE L1 5266 5335 -822 1090 128 17 22 chr17 12652969 12653148 -72785332 + MLT1B LTR MaLR 1 178 -212 2106 108 20 7 chr17 12653148 12653453 -72785027 + AluSc SINE Alu 1 309 0 209 122 49 0 chr17 12653456 12653497 -72784983 + A-rich Low_complexity Low_complexity 3 45 0 435 145 12 0 chr17 12653546 12653629 -72784851 + MLT1B LTR MaLR 192 275 -115 660 164 35 0 chr17 12653665 12653781 -72784699 + MLT1B LTR MaLR 269 388 -2 3947 186 67 38 chr17 12653782 12654763 -72783717 + L1MD2 LINE L1 5331 6340 -19 2273 129 72 33 chr17 12655004 12655508 -72782972 + MLT2A2 LTR ERVL 1 547 -7 2274 89 3 32 chr17 12655574 12655889 -72782591 + AluSp SINE Alu 3 308 -5 453 228 32 3 chr17 12656232 12656346 -72782134 + L1MC/D LINE L1 5528 5643 -522 2223 108 3 3 chr17 12656394 12656700 -72781780 + AluSq SINE Alu 3 308 -5 1827 198 20 2 chr17 12658241 12658640 -72779840 - L1MB5 LINE L1 -9 6165 5760 278 307 33 39 chr17 12658746 12658899 -72779581 - L1M4 LINE L1 -6275 267 116 1085 269 45 8 chr17 12660951 12661352 -72777128 + L1ME2 LINE L1 2417 2832 -3314 426 279 32 19 chr17 12661391 12661545 -72776935 + AluJo SINE Alu 74 229 -83 183 129 0 0 chr17 12661545 12661576 -72776904 + (A)n Simple_repeat Simple_repeat 1 31 0 1583 274 89 52 chr17 12661576 12662581 -72775899 + L1ME2 LINE L1 2814 3855 -2291 246 228 0 0 chr17 12662893 12662950 -72775530 + L1 LINE L1 4255 4311 -1835 8653 173 11 17 chr17 12663263 12665536 -72772944 + L1PB3 LINE L1 3537 5789 -365 241 180 33 16 chr17 12665537 12665598 -72772882 + (TA)n Simple_repeat Simple_repeat 1 62 0 340 130 0 4 chr17 12665599 12665656 -72772824 - L1MB5 LINE L1 -374 5780 5735 261 0 0 0 chr17 12665684 12665713 -72772767 + (CA)n Simple_repeat Simple_repeat 1 29 0 2408 115 14 0 chr17 12665713 12666070 -72772410 + L1PB3 LINE L1 5793 6154 0 2211 255 71 1 chr17 12666076 12666755 -72771725 + L1ME2 LINE L1 3841 4566 -1580 21 0 0 0 chr17 12666885 12666906 -72771574 + AT_rich Low_complexity Low_complexity 1 21 0 305 233 0 58 chr17 12667056 12667142 -72771338 - L2 LINE L2 0 3313 3233 1663 230 53 13 chr17 12667414 12667888 -72770592 + L1ME2 LINE L1 5499 5991 -173 405 226 0 17 chr17 12667909 12668024 -72770456 + L1MA10 LINE L1 6220 6332 -2 42 0 0 0 chr17 12669378 12669420 -72769060 + AT_rich Low_complexity Low_complexity 1 42 0 2242 86 0 0 chr17 12669599 12669879 -72768601 + AluSg1 SINE Alu 21 300 -9 1696 94 123 7 chr17 12670244 12670520 -72767960 + AluSg1 SINE Alu 1 308 -1 241 299 176 25 chr17 12671153 12671397 -72767083 - L2 LINE L2 -525 2789 2509 1605 229 16 8 chr17 12671410 12671781 -72766699 - MLT1A2 LTR MaLR 0 374 1 195 69 0 0 chr17 12671789 12671818 -72766662 + (CA)n Simple_repeat Simple_repeat 2 30 0 503 355 65 48 chr17 12672320 12672839 -72765641 - L2 LINE L2 -23 3249 2738 448 202 183 47 chr17 12673144 12673357 -72765123 - MLT1K LTR MaLR -2 586 345 988 176 136 10 chr17 12673754 12673953 -72764527 - MER58A DNA MER1_type 0 224 1 2195 105 3 7 chr17 12675334 12675629 -72762851 + AluSx SINE Alu 1 294 -18 266 293 98 8 chr17 12676475 12676608 -72761872 + L2 LINE L2 2836 2980 -292 200 327 40 20 chr17 12676635 12676736 -72761744 + MIR SINE MIR 90 192 -70 415 145 66 0 chr17 12676897 12676973 -72761507 - L1MA9 LINE L1 -147 6165 6085 321 336 72 28 chr17 12677145 12677505 -72760975 + HAL1b LINE L1 399 774 -574 716 189 182 0 chr17 12678941 12679100 -72759380 + MER5A DNA MER1_type 1 188 -1 188 295 16 109 chr17 12679278 12679461 -72759019 + MIR3 SINE MIR 41 206 -2 311 272 35 58 chr17 12680168 12680341 -72758139 + L1MEd LINE L1 913 1081 -5038 329 284 28 8 chr17 12680428 12680598 -72757882 - L1MEc LINE L1 -3403 2812 2640 694 262 66 44 chr17 12680651 12681019 -72757461 - L1MEc LINE L1 -3708 2507 2172 264 310 25 30 chr17 12681030 12681230 -72757250 - L1MEc LINE L1 -4322 2074 1876 1801 146 0 0 chr17 12682559 12682834 -72755646 + MER57A LTR ERV1 1 275 -128 445 154 0 22 chr17 12682904 12682995 -72755485 + MER53 DNA DNA 98 186 -3 1240 198 83 22 chr17 12683355 12683718 -72754762 - MER3 DNA MER1_type 0 2624 2240 305 204 45 11 chr17 12683714 12683816 -72754664 - MER3 DNA MER1_type -86 123 81 * 2122 138 29 9 chr17 12684800 12685141 -72753339 - MER7A DNA MER2_type 0 346 1 362 292 21 0 chr17 12685543 12685639 -72752841 + MIR SINE MIR 57 154 -108 21 0 0 0 chr17 12685899 12685920 -72752560 + AT_rich Low_complexity Low_complexity 1 21 0 3092 199 73 34 chr17 12686688 12687819 -72750661 - L1MB7 LINE L1 0 6184 4977 1786 191 0 0 chr17 12687819 12688117 -72750363 - AluSx SINE Alu -14 298 1 3092 199 73 34 chr17 12688117 12688453 -72750027 - L1MB7 LINE L1 -1207 4977 4656 22 35 0 0 chr17 12688526 12688555 -72749925 + AT_rich Low_complexity Low_complexity 1 29 0 1452 40 51 0 chr17 12688727 12688904 -72749576 - AluY SINE Alu -5 306 121 2256 105 10 0 chr17 12689224 12689520 -72748960 - AluSp SINE Alu -14 299 1 274 327 97 14 chr17 12689533 12689750 -72748730 - L1ME LINE L1 -306 5847 5613 296 314 31 31 chr17 12689798 12690021 -72748459 - L1ME LINE L1 -3375 2754 2532 1773 135 66 3 chr17 12690148 12690437 -72748043 - AluSx SINE Alu -5 307 1 304 306 20 34 chr17 12690438 12690585 -72747895 - L1ME LINE L1 -3956 2173 2029 25 51 0 0 chr17 12690585 12690624 -72747856 + AT_rich Low_complexity Low_complexity 1 39 0 1662 265 131 16 chr17 12690624 12691420 -72747060 - L1ME3A LINE L1 -19 6545 5659 1108 206 56 28 chr17 12691526 12691985 -72746495 - MLT1E2 LTR MaLR -54 571 89 316 268 135 48 chr17 12692048 12692447 -72746033 - L1ME3A LINE L1 -968 5572 5139 403 297 115 21 chr17 12692528 12692955 -72745525 - L1ME3A LINE L1 -4531 2009 1543 379 308 57 63 chr17 12693162 12694233 -72744247 - L1MEd LINE L1 -860 1630 592 315 335 39 68 chr17 12694487 12694678 -72743802 - HAL1 LINE L1 -1129 1378 1196 2328 101 10 0 chr17 12694678 12694985 -72743495 - AluSx SINE Alu -2 310 1 315 335 39 68 chr17 12694985 12695074 -72743406 - HAL1 LINE L1 -1311 1196 1106 2229 78 14 10 chr17 12695406 12695702 -72742778 - AluSq SINE Alu -16 297 1 639 240 47 0 chr17 12696414 12696543 -72741937 + MLT1E LTR MaLR 1 135 -458 1462 251 60 48 chr17 12696602 12697065 -72741415 + MLT1E LTR MaLR 119 587 -6 2420 80 0 16 chr17 12697108 12697419 -72741061 + AluSc SINE Alu 3 308 -1 327 300 106 0 chr17 12697702 12697861 -72740619 - MIR SINE MIR -56 206 20 2164 98 0 36 chr17 12698391 12698697 -72739783 + AluSg SINE Alu 1 295 -15 445 209 76 9 chr17 12699007 12699112 -72739368 + MLT1E2 LTR MaLR 397 508 -118 3698 268 95 64 chr17 12699118 12700801 -72737679 - L2 LINE L2 -780 2534 800 2459 93 3 0 chr17 12701079 12701390 -72737090 - AluSx SINE Alu 0 312 1 309 105 250 13 chr17 12701445 12701521 -72736959 - L1ME2 LINE L1 -1 6163 6070 537 89 0 0 chr17 12701537 12701616 -72736864 - Alu SINE Alu 0 312 234 2779 224 74 33 chr17 12701620 12702170 -72736310 - L1ME2 LINE L1 -85 6079 5553 1304 190 42 48 chr17 12702170 12702506 -72735974 - AluJo SINE Alu 0 312 1 2779 224 74 33 chr17 12702506 12703257 -72735223 - L1ME2 LINE L1 -611 5553 4695 2465 81 0 7 chr17 12703257 12703564 -72734916 + AluSq SINE Alu 1 305 -8 2779 224 74 33 chr17 12703564 12703893 -72734587 - L1ME2 LINE L1 -1469 4695 4381 2152 173 46 0 chr17 12703894 12704263 -72734217 - MSTB LTR MaLR 0 426 41 2428 81 0 0 chr17 12704264 12704571 -72733909 + AluY SINE Alu 2 308 -3 1291 94 0 6 chr17 12704603 12704773 -72733707 + AluSc SINE Alu 125 293 -16 313 192 0 0 chr17 12704773 12704825 -72733655 - MSTB LTR MaLR -374 52 1 5818 213 115 50 chr17 12704835 12705451 -72733029 - L1MC3 LINE L1 -8 7777 7202 2380 88 3 0 chr17 12705451 12705748 -72732732 + AluSp SINE Alu 1 298 -15 5818 213 115 50 chr17 12705748 12706919 -72731561 - L1MC3 LINE L1 -583 7202 5874 232 195 0 0 chr17 12707486 12707527 -72730953 + LTR50 LTR ERVL 122 162 -633 278 256 83 8 chr17 12707976 12708097 -72730383 + LTR33A LTR ERVL 392 521 -2 2348 112 0 0 chr17 12708169 12708482 -72729998 + AluSq SINE Alu 1 313 0 305 181 32 85 chr17 12709025 12709119 -72729361 - MIR SINE MIR -113 149 61 426 239 246 7 chr17 12710141 12710283 -72728197 + MER5B DNA MER1_type 1 176 -2 257 182 15 76 chr17 12710283 12710338 -72728142 - MIR3 SINE MIR -50 158 108 236 277 96 0 chr17 12710758 12710852 -72727628 - MER94 DNA DNA -31 103 1 300 234 129 16 chr17 12711659 12711783 -72726697 + MIR SINE MIR 66 203 -59 531 204 54 54 chr17 12712439 12712586 -72725894 + MIR SINE MIR 51 197 -65 449 299 68 7 chr17 12713334 12713481 -72724999 + MIR3 SINE MIR 7 162 -46 420 265 75 20 chr17 12713514 12713661 -72724819 + MIR SINE MIR 35 189 -73 480 179 0 63 chr17 12713947 12714042 -72724438 - MER58C DNA MER1_type 0 215 127 323 263 90 8 chr17 12714158 12714291 -72724189 - MLT1J2 LTR MaLR -44 406 263 446 257 0 0 chr17 12714322 12714427 -72724053 - MER58C DNA MER1_type -110 105 1 1554 206 124 33 chr17 12714656 12714723 -72723757 - MLT1C LTR MaLR 0 467 408 2399 59 0 0 chr17 12714723 12715012 -72723468 + AluY SINE Alu 1 289 -22 1554 206 124 33 chr17 12715012 12715372 -72723108 - MLT1C LTR MaLR -59 408 1 215 336 29 7 chr17 12716230 12716367 -72722113 - L2 LINE L2 -1651 1663 1524 536 266 0 28 chr17 12716500 12716643 -72721837 + MIR SINE MIR 92 230 -32 209 160 0 40 chr17 12716829 12716879 -72721601 + (CAT)n Simple_repeat Simple_repeat 3 50 0 286 321 104 8 chr17 12718112 12718246 -72720234 - MLT1J2 LTR MaLR -55 395 249 347 283 113 0 chr17 12718327 12718433 -72720047 - MLT1J2 LTR MaLR -332 118 1 659 240 87 15 chr17 12718956 12719152 -72719328 - MIR SINE MIR -2 260 51 1399 261 40 29 chr17 12719808 12720260 -72718220 - L1MDa LINE L1 -1994 4546 4090 1930 161 3 16 chr17 12720260 12720571 -72717909 - AluJb SINE Alu -5 307 1 914 149 0 6 chr17 12720585 12720753 -72717727 + (TTCC)n Simple_repeat Simple_repeat 1 167 0 3512 232 74 39 chr17 12720753 12722151 -72716329 - L1MDa LINE L1 -2452 4088 2642 6652 85 13 0 chr17 12722187 12723324 -72715156 - L1PB1 LINE L1 0 6151 5004 2594 223 92 55 chr17 12723368 12724559 -72713921 - L1MDa LINE L1 -3894 2646 1412 2821 237 25 15 chr17 12724577 12725412 -72713068 + L1M4 LINE L1 4573 5420 -743 2412 74 0 0 chr17 12726043 12726341 -72712139 + AluY SINE Alu 1 298 -13 520 240 161 65 chr17 12726484 12726701 -72711779 + MIR SINE MIR 11 248 -14 302 341 79 64 chr17 12727223 12727490 -72710990 - L2 LINE L2 -2844 470 200 306 311 88 37 chr17 12728215 12728488 -72709992 - L1MDa LINE L1 -5767 763 477 364 248 67 0 chr17 12730717 12730822 -72707658 + MIR SINE MIR 37 148 -114 465 138 53 32 chr17 12730855 12730913 -72707567 - MER53 DNA DNA 0 189 127 2397 93 0 3 chr17 12730913 12731226 -72707254 - AluSq SINE Alu -1 312 1 465 138 53 32 chr17 12731226 12731261 -72707219 - MER53 DNA DNA -62 127 94 875 264 67 57 chr17 12731778 12731984 -72706496 - L1ME4a LINE L1 -1 6120 5917 2396 88 0 0 chr17 12731984 12732281 -72706199 - AluSc SINE Alu -12 297 1 875 264 67 57 chr17 12732281 12732487 -72705993 - L1ME4a LINE L1 -204 5917 5700 2694 35 0 7 chr17 12732487 12732797 -72705683 + AluY SINE Alu 1 308 -3 875 264 67 57 chr17 12732797 12732894 -72705586 - L1ME4a LINE L1 -421 5700 5605 5059 118 18 3 chr17 12732907 12733635 -72704845 - L1MA2 LINE L1 -5 6299 5561 490 241 30 106 chr17 12733652 12733889 -72704591 - MIR SINE MIR -7 255 37 268 311 109 0 chr17 12734137 12734256 -72704224 - MIR SINE MIR -98 164 33 226 232 0 18 chr17 12734524 12734580 -72703900 + (CATA)n Simple_repeat Simple_repeat 3 57 0 323 342 117 23 chr17 12734958 12735353 -72703127 - L1ME4a LINE L1 -1316 4830 4399 230 329 77 31 chr17 12735895 12736117 -72702363 - L1ME4a LINE L1 -2339 3807 3576 894 350 76 35 chr17 12736126 12737321 -72701159 - L1ME4a LINE L1 -2591 3555 2312 201 359 8 0 chr17 12737392 12737509 -72700971 + MIR SINE MIR 132 249 -13 2262 85 0 3 chr17 12737544 12737826 -72700654 - AluSx SINE Alu -14 298 18 182 278 264 0 chr17 12737993 12738065 -72700415 - L2 LINE L2 -43 3270 3180 607 283 36 0 chr17 12738468 12738634 -72699846 - MER20 DNA MER1_type 0 219 48 2085 212 79 0 chr17 12738636 12739127 -72699353 + MER74A LTR ERVL 2 531 -27 2232 96 0 0 chr17 12739145 12739457 -72699023 - AluSc SINE Alu 0 312 1 186 305 12 73 chr17 12739522 12739604 -72698876 - MER5A DNA MER1_type -105 84 8 268 345 220 11 chr17 12739981 12740158 -72698322 + L2 LINE L2 3059 3272 0 192 152 0 0 chr17 12740736 12740769 -72697711 + T-rich Low_complexity Low_complexity 1 33 0 211 284 0 42 chr17 12741598 12741693 -72696787 + CT-rich Low_complexity Low_complexity 3 93 0 1864 198 118 82 chr17 12742071 12742790 -72695690 + LTR1B LTR ERV1 1 745 -81 558 178 17 106 chr17 12743275 12743455 -72695025 - L1MA10 LINE L1 -3 6331 6168 1536 189 60 0 chr17 12743459 12743760 -72694720 - L1MC1 LINE L1 0 6333 6015 289 316 53 27 chr17 12744214 12744401 -72694079 + L2 LINE L2 2845 3036 -277 834 247 46 0 chr17 12744475 12744669 -72693811 - MER3 DNA MER1_type -1 208 6 2229 115 3 0 chr17 12746782 12747077 -72691403 + AluSp SINE Alu 1 296 -17 725 212 34 50 chr17 12747198 12747377 -72691103 + FRAM SINE Alu 1 40 0 2341 60 0 7 chr17 12747382 12747687 -72690793 + AluY SINE Alu 1 303 0 637 249 56 60 chr17 12748199 12748468 -72690012 + L2 LINE L2 3046 3313 0 469 130 0 0 chr17 12748889 12748966 -72689514 + L1P4 LINE L1 5456 5532 -631 206 116 23 0 chr17 12749247 12749290 -72689190 + GA-rich Low_complexity Low_complexity 2 45 0 2197 95 20 0 chr17 12749356 12749651 -72688829 + AluSg SINE Alu 1 301 -9 752 332 100 0 chr17 12749789 12750129 -72688351 - MLT1I LTR MaLR 0 409 36 513 323 156 23 chr17 12750248 12750521 -72687959 - L2 LINE L2 -803 2511 2276 470 278 37 0 chr17 12750521 12750629 -72687851 - MER81 DNA DNA -1 113 2 513 323 156 23 chr17 12750629 12750876 -72687604 - L2 LINE L2 -1038 2276 1922 8694 196 65 69 chr17 12751357 12752386 -72686094 - L1 LINE L1 -830 5316 4284 225 0 0 0 chr17 12752386 12752411 -72686069 + (TG)n Simple_repeat Simple_repeat 2 26 0 8694 196 65 69 chr17 12752411 12753028 -72685452 - L1 LINE L1 -1862 4284 3666 180 0 0 0 chr17 12753028 12753048 -72685432 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 8694 196 65 69 chr17 12753048 12753286 -72685194 - L1 LINE L1 -2480 3666 3429 2568 50 0 0 chr17 12753286 12753587 -72684893 - AluYa5 SINE Alu -9 302 2 8694 196 65 69 chr17 12753587 12753920 -72684560 - L1 LINE L1 -2717 3429 3096 186 43 0 0 chr17 12753920 12753943 -72684537 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 8694 196 65 69 chr17 12753943 12754374 -72684106 - L1 LINE L1 -3050 3096 2676 297 216 0 0 chr17 12754377 12754428 -72684052 + Tigger1 DNA MER2_type 2368 2418 0 3469 185 86 31 chr17 12754429 12755339 -72683141 - L1MDa LINE L1 -4318 2222 1263 2187 102 0 7 chr17 12755348 12755642 -72682838 - AluSx SINE Alu -7 305 14 2031 262 65 68 chr17 12755680 12755985 -72682495 - L1MDa LINE L1 -5445 1095 790 2392 94 3 0 chr17 12755985 12756283 -72682197 - AluSp SINE Alu -14 299 1 2031 262 65 68 chr17 12756283 12756890 -72681590 - L1MDa LINE L1 -5750 790 22 23 68 0 0 chr17 12757062 12757106 -72681374 + AT_rich Low_complexity Low_complexity 1 44 0 819 301 68 51 chr17 12757181 12758023 -72680457 + L1ME4a LINE L1 5265 6120 -1 523 318 73 17 chr17 12758057 12758290 -72680190 - MLT1L LTR MaLR -129 486 241 403 295 29 43 chr17 12758838 12759045 -72679435 + MIR3 SINE MIR 3 206 -2 454 232 43 29 chr17 12759531 12759669 -72678811 + MIR SINE MIR 50 189 -73 366 317 72 41 chr17 12760227 12760646 -72677834 + L1MC/D LINE L1 4881 5312 -834 23 0 0 0 chr17 12760693 12760716 -72677764 + AT_rich Low_complexity Low_complexity 1 23 0 307 330 76 39 chr17 12760765 12760888 -72677592 + L1MC/D LINE L1 5442 5559 -2249 2296 110 0 0 chr17 12760888 12761196 -72677284 + AluSq SINE Alu 1 308 -5 307 330 76 39 chr17 12761196 12761427 -72677053 + L1MC/D LINE L1 5559 5809 -1999 1183 219 76 17 chr17 12761600 12761902 -72676578 + L1MD3 LINE L1 7640 7959 -36 2523 69 0 3 chr17 12761932 12762235 -72676245 + AluSx SINE Alu 1 302 -10 258 239 0 28 chr17 12763379 12763450 -72675030 - L1MD3 LINE L1 -76 7919 7851 249 287 67 62 chr17 12763669 12763878 -72674602 - L2 LINE L2 -337 2977 2768 1994 187 23 41 chr17 12763885 12764046 -72674434 + MLT1B LTR MaLR 1 163 -227 2259 100 3 7 chr17 12764046 12764346 -72674134 - AluSx SINE Alu -13 299 1 1994 187 23 41 chr17 12764346 12764575 -72673905 + MLT1B LTR MaLR 163 384 -6 258 365 19 9 chr17 12764740 12764800 -72673680 + MER91C DNA MER1_type 5 63 -77 16261 125 14 24 chr17 12764800 12764981 -72673499 - Tigger1 DNA MER2_type 0 2418 2237 2215 108 3 0 chr17 12764981 12765278 -72673202 + AluSx SINE Alu 1 298 -14 16261 125 14 24 chr17 12765278 12766544 -72671936 - Tigger1 DNA MER2_type -181 2237 960 2214 91 7 0 chr17 12766544 12766873 -72671607 - AluSp SINE Alu 0 331 1 16261 125 14 24 chr17 12766873 12767629 -72670851 - Tigger1 DNA MER2_type -1458 960 236 2382 90 0 3 chr17 12767629 12767928 -72670552 + AluSg SINE Alu 1 298 -12 16261 125 14 24 chr17 12767928 12768161 -72670319 - Tigger1 DNA MER2_type -2182 236 2 258 365 19 9 chr17 12768161 12768207 -72670273 + MER91C DNA MER1_type 63 112 -28 281 353 55 35 chr17 12768253 12768542 -72669938 - L2 LINE L2 -741 2573 2279 2162 134 0 7 chr17 12768664 12768993 -72669487 + AluSx SINE Alu 1 312 0 213 283 75 0 chr17 12769187 12769240 -72669240 - L2 LINE L2 -2 3311 3255 368 225 297 7 chr17 12771349 12771487 -72666993 - MER5A DNA MER1_type 0 189 12 440 291 77 39 chr17 12771883 12772065 -72666415 + MIR3 SINE MIR 15 203 -5 330 235 34 141 chr17 12772188 12772377 -72666103 + MIR SINE MIR 8 169 -93 573 221 9 0 chr17 12772377 12772490 -72665990 + MER81 DNA DNA 1 114 0 330 235 34 141 chr17 12772490 12772534 -72665946 + MIR SINE MIR 169 216 -46 2371 74 3 0 chr17 12772597 12772882 -72665598 - AluSp SINE Alu -15 298 13 495 260 31 0 chr17 12773684 12773811 -72664669 - MER94 DNA DNA -3 131 1 193 220 40 0 chr17 12774640 12774690 -72663790 + L3 LINE CR1 1524 1575 -2 422 326 56 69 chr17 12775902 12776135 -72662345 + L2 LINE L2 3024 3253 -19 180 0 0 0 chr17 12776843 12776863 -72661617 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6908 79 44 0 chr17 12776868 12778012 -72660468 - L1PA8A LINE L1 -13 6118 4955 2012 191 17 0 chr17 12778012 12778357 -72660123 - MER82 DNA MER2_type -302 351 1 708 197 77 11 chr17 12778357 12778540 -72659940 + L1MC5 LINE L1 7732 7926 -35 315 0 0 0 chr17 12779373 12779408 -72659072 + (TG)n Simple_repeat Simple_repeat 2 36 0 186 404 0 0 chr17 12779635 12779739 -72658741 - MIR SINE MIR 0 262 159 3586 151 76 0 chr17 12780031 12780668 -72657812 - L1MC3 LINE L1 -14 7771 5609 373 263 0 0 chr17 12780677 12780757 -72657723 + L2 LINE L2 3234 3313 0 772 166 47 64 chr17 12781824 12782059 -72656421 - Charlie5 DNA MER1_type -29 2583 2353 667 239 13 0 chr17 12782062 12782217 -72656263 - Charlie5 DNA MER1_type -2416 196 40 403 288 63 21 chr17 12782226 12782417 -72656063 - L2 LINE L2 -198 3115 2917 2764 155 34 8 chr17 12783494 12783965 -72654515 + L1MA8 LINE L1 5799 6281 -10 1185 123 0 0 chr17 12784161 12784331 -72654149 + AluSg/x SINE Alu 127 296 -16 584 105 0 11 chr17 12784331 12784426 -72654054 + (GGGGA)n Simple_repeat Simple_repeat 3 96 0 238 313 188 10 chr17 12784861 12785069 -72653411 + L3 LINE CR1 1310 1554 -23 2199 115 0 13 chr17 12785240 12785552 -72652928 - AluSx SINE Alu -4 308 1 1612 173 39 3 chr17 12785720 12786004 -72652476 - AluJo SINE Alu -18 294 1 2214 98 14 0 chr17 12786248 12786545 -72651935 - AluSp SINE Alu -12 301 1 799 254 96 96 chr17 12787906 12788304 -72650176 - MLT1J LTR MaLR -2 509 112 2208 126 7 0 chr17 12788534 12788843 -72649637 + AluSx SINE Alu 1 311 -1 2347 82 10 0 chr17 12791312 12791615 -72646865 + AluSp SINE Alu 1 306 -7 885 261 68 5 chr17 12791619 12791841 -72646639 - MIR SINE MIR -21 241 6 542 260 64 64 chr17 12792749 12792968 -72645512 + LTR16A LTR ERVL 61 279 -171 931 175 58 153 chr17 12792969 12793130 -72645350 - MER96B DNA MER1_type? 0 417 242 2218 97 0 0 chr17 12793130 12793409 -72645071 - AluSc SINE Alu -29 280 2 931 175 58 153 chr17 12793409 12793431 -72645049 - MER96B DNA MER1_type? -175 242 220 1481 185 3 60 chr17 12793431 12793733 -72644747 + AluJo SINE Alu 5 289 -23 931 175 58 153 chr17 12793733 12793994 -72644486 - MER96B DNA MER1_type? -197 220 14 278 313 18 37 chr17 12794008 12794171 -72644309 + LTR16A1 LTR ERVL 298 457 0 228 336 71 71 chr17 12794215 12794426 -72644054 + MIR SINE MIR 48 258 -4 6665 88 17 0 chr17 12795340 12796311 -72642169 - L1PA13 LINE L1 0 6163 5170 411 113 0 0 chr17 12796805 12796867 -72641613 + (TTCTCC)n Simple_repeat Simple_repeat 4 65 0 1681 162 4 0 chr17 12796867 12797205 -72641275 - AluSx SINE Alu 0 445 45 616 214 81 35 chr17 12797311 12797484 -72640996 - MIR SINE MIR -66 196 16 452 274 32 16 chr17 12797948 12798072 -72640408 - MIR3 SINE MIR -48 160 35 245 193 70 0 chr17 12798348 12798405 -72640075 + MIR SINE MIR 81 141 -121 494 175 68 10 chr17 12799023 12799126 -72639354 - MIR3 SINE MIR -48 160 52 2469 132 5 70 chr17 12800137 12800554 -72637926 - MLT1B LTR MaLR 0 390 1 904 202 14 69 chr17 12800668 12800886 -72637594 + MER63A DNA MER1_type 1 206 -4 339 233 91 62 chr17 12801530 12801706 -72636774 + HAL1 LINE L1 1208 1388 -1119 324 376 49 0 chr17 12802243 12802448 -72636032 + L2 LINE L2 2525 2739 -575 2285 75 0 7 chr17 12802604 12802885 -72635595 - AluSc SINE Alu -14 295 17 449 275 16 28 chr17 12803125 12803307 -72635173 - MER104 DNA MER2_type 0 180 1 317 330 104 0 chr17 12803330 12803445 -72635035 - L2 LINE L2 -5 3308 3182 191 296 67 89 chr17 12803459 12803594 -72634886 + L2 LINE L2 3141 3272 0 6162 41 0 0 chr17 12804367 12805229 -72633251 + L1PA5 LINE L1 5236 6154 0 577 232 58 0 chr17 12805730 12805868 -72632612 - MLT1A1 LTR MaLR -77 288 143 344 284 101 0 chr17 12805868 12805977 -72632503 - MIR SINE MIR -71 137 18 2347 99 0 0 chr17 12807211 12807514 -72630966 - AluY SINE Alu 0 311 9 284 298 93 40 chr17 12807904 12808055 -72630425 + MIR SINE MIR 85 243 -19 2280 97 3 0 chr17 12808337 12808635 -72629845 - AluSq SINE Alu -14 299 1 212 250 0 0 chr17 12808854 12808898 -72629582 + MIR3 SINE MIR 117 160 -48 376 339 205 7 chr17 12808913 12809323 -72629157 - L2 LINE L2 -10 3303 2813 438 284 23 51 chr17 12809548 12809763 -72628717 - LTR33 LTR ERVL -294 227 19 637 312 35 9 chr17 12809806 12810037 -72628443 - L2 LINE L2 -541 2773 2537 243 96 0 0 chr17 12811056 12811108 -72627372 - LTR66 LTR ERVL -165 445 394 309 211 22 33 chr17 12811132 12811222 -72627258 + L1MC4 LINE L1 6616 6704 -1338 462 31 132 0 chr17 12811239 12811398 -72627082 + (TA)n Simple_repeat Simple_repeat 1 180 0 436 24 100 41 chr17 12811412 12811582 -72626898 + (TA)n Simple_repeat Simple_repeat 1 180 0 42 36 0 0 chr17 12811582 12811638 -72626842 + AT_rich Low_complexity Low_complexity 1 56 0 424 34 134 0 chr17 12811638 12811787 -72626693 + (TA)n Simple_repeat Simple_repeat 2 170 0 444 282 67 7 chr17 12812252 12812401 -72626079 + MIR SINE MIR 105 262 0 351 167 0 0 chr17 12813160 12813226 -72625254 + (CAT)n Simple_repeat Simple_repeat 1 66 0 720 267 51 51 chr17 12813232 12813468 -72625012 - MIR SINE MIR -12 250 15 4400 29 8 0 chr17 12814239 12814759 -72623721 - L1P LINE L1 -855 5291 4768 4280 11 0 0 chr17 12814752 12815225 -72623255 + L1HS LINE L1 5682 6154 -1 * 910 256 160 0 chr17 12816600 12816838 -72621642 + AluYa8 SINE Alu 3 278 -32 485 35 35 35 chr17 12816838 12816923 -72621557 + (TAAAA)n Simple_repeat Simple_repeat 1 85 0 2138 112 16 3 chr17 12816962 12817317 -72621163 + AluSq SINE Alu 1 359 0 524 346 41 68 chr17 12817317 12817981 -72620499 - L2 LINE L2 -438 2876 2231 265 304 112 0 chr17 12818870 12818995 -72619485 + L2 LINE L2 3170 3308 -5 469 256 44 0 chr17 12819396 12819533 -72618947 + MER69 DNA AcHobo 2384 2526 0 2382 101 0 0 chr17 12819580 12819887 -72618593 - AluSg SINE Alu -3 307 1 404 299 51 43 chr17 12819901 12820135 -72618345 + MER102a DNA MER1_type 92 327 -3 2054 131 19 25 chr17 12820213 12820400 -72618080 - AluJb SINE Alu 0 312 126 402 21 0 0 chr17 12820400 12820447 -72618033 + (TG)n Simple_repeat Simple_repeat 2 48 0 2054 131 19 25 chr17 12820447 12820573 -72617907 - AluJb SINE Alu -186 126 1 1207 169 86 12 chr17 12821004 12821247 -72617233 + MLT1E1 LTR MaLR 1 261 -393 2294 95 7 0 chr17 12821255 12821560 -72616920 + AluSp SINE Alu 1 307 -6 1172 213 17 9 chr17 12821601 12821831 -72616649 + MLT1E1 LTR MaLR 405 636 -18 1982 131 6 22 chr17 12821957 12822271 -72616209 + AluSx SINE Alu 1 309 -3 296 326 35 21 chr17 12822280 12822421 -72616059 - MIR SINE MIR -42 220 78 448 81 27 0 chr17 12822896 12822970 -72615510 + (CA)n Simple_repeat Simple_repeat 2 77 0 1769 208 66 37 chr17 12823412 12823894 -72614586 + MLT1D LTR MaLR 7 502 -3 216 308 15 0 chr17 12827653 12827718 -72610762 + CT-rich Low_complexity Low_complexity 1 66 0 558 235 111 51 chr17 12828083 12828317 -72610163 + MIR SINE MIR 15 262 0 261 281 97 0 chr17 12828328 12828442 -72610038 + MIR3 SINE MIR 81 205 -3 469 179 234 7 chr17 12828895 12829040 -72609440 + MER53 DNA DNA 12 189 0 1964 63 0 0 chr17 12829057 12829294 -72609186 - AluY SINE Alu -8 303 67 209 385 0 0 chr17 12830097 12830201 -72608279 + MIR3 SINE MIR 98 201 -7 348 243 146 73 chr17 12830416 12830622 -72607858 + L2 LINE L2 3045 3265 -48 220 200 0 0 chr17 12830657 12830702 -72607778 + L2 LINE L2 3265 3309 -4 214 143 0 0 chr17 12831531 12831566 -72606914 + MIR SINE MIR 110 144 -64 356 314 57 33 chr17 12832821 12833066 -72605414 - L1ME4a LINE L1 -188 5933 5683 338 198 198 0 chr17 12833524 12833610 -72604870 - MIR SINE MIR -64 198 96 207 300 0 0 chr17 12834060 12834110 -72604370 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 404 308 93 31 chr17 12834164 12834485 -72603995 + L1MC4a LINE L1 4910 5250 -896 231 274 101 16 chr17 12834531 12834731 -72603749 + L1MC4a LINE L1 5327 5542 -579 301 276 20 66 chr17 12834793 12834945 -72603535 + L1MC4a LINE L1 5722 5866 -1942 2079 96 0 4 chr17 12835019 12835299 -72603181 + AluY SINE Alu 1 279 -32 243 0 0 0 chr17 12835299 12835326 -72603154 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 447 19 0 0 chr17 12835684 12835736 -72602744 + (CA)n Simple_repeat Simple_repeat 1 52 0 371 181 101 94 chr17 12835839 12835988 -72602492 + L1ME4a LINE L1 5954 6103 -18 373 326 27 45 chr17 12836243 12836464 -72602016 + MIR SINE MIR 42 258 -4 3012 66 14 0 chr17 12836502 12836865 -72601615 + L1PA12 LINE L1 5801 6168 0 2480 65 0 0 chr17 12836873 12837166 -72601314 + AluY SINE Alu 1 293 -18 2425 82 0 0 chr17 12837328 12837633 -72600847 - AluSc SINE Alu -4 305 1 1745 97 0 9 chr17 12838094 12838380 -72600100 - AluY SINE Alu 0 343 60 276 259 62 12 chr17 12838414 12838495 -72599985 - MIR SINE MIR -66 142 58 29 0 0 0 chr17 12838641 12838670 -72599810 + AT_rich Low_complexity Low_complexity 1 29 0 211 175 16 16 chr17 12838982 12839045 -72599435 + (TA)n Simple_repeat Simple_repeat 2 64 0 363 270 121 66 chr17 12839184 12839473 -72599007 + L1ME4a LINE L1 5813 6117 -4 369 271 71 27 chr17 12839750 12839913 -72598567 - MIR SINE MIR -67 141 19 598 296 15 29 chr17 12840398 12840604 -72597876 - MIR SINE MIR -58 204 2 228 167 0 0 chr17 12842908 12842956 -72595524 + CT-rich Low_complexity Low_complexity 2 49 0 222 150 0 0 chr17 12842994 12843034 -72595446 + (CA)n Simple_repeat Simple_repeat 1 40 0 495 353 6 18 chr17 12843166 12843328 -72595152 + L2 LINE L2 3096 3256 -12 212 83 0 28 chr17 12843328 12843364 -72595116 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 231 88 0 0 chr17 12843527 12843561 -72594919 + (TC)n Simple_repeat Simple_repeat 1 34 0 741 222 11 72 chr17 12843928 12844007 -72594473 - MER45A DNA AcHobo -1412 169 87 2201 120 0 3 chr17 12844007 12844308 -72594172 + AluSg SINE Alu 1 300 -10 741 222 11 72 chr17 12844308 12844408 -72594072 - MER45A DNA AcHobo -1494 87 1 1820 170 0 13 chr17 12844456 12844756 -72593724 + AluSx SINE Alu 1 296 -16 2151 104 7 7 chr17 12844765 12845064 -72593416 + AluSx SINE Alu 1 299 -13 435 236 155 35 chr17 12845665 12845839 -72592641 - MIR3 SINE MIR -12 196 2 194 295 13 64 chr17 12846676 12846754 -72591726 - MIR3 SINE MIR -39 169 96 21 0 0 0 chr17 12847069 12847090 -72591390 + AT_rich Low_complexity Low_complexity 1 21 0 391 72 62 31 chr17 12847869 12847966 -72590514 + CT-rich Low_complexity Low_complexity 1 100 0 776 91 8 54 chr17 12847972 12848216 -72590264 + (TTCC)n Simple_repeat Simple_repeat 1 232 0 227 245 0 61 chr17 12848478 12848576 -72589904 + T-rich Low_complexity Low_complexity 5 96 0 2227 94 3 0 chr17 12848992 12849278 -72589202 + AluSx SINE Alu 1 287 -25 351 292 112 62 chr17 12849573 12849878 -72588602 + L1ME LINE L1 5255 5574 -2234 291 294 54 29 chr17 12850098 12850240 -72588240 + MER5A DNA MER1_type 27 172 -6 247 351 18 18 chr17 12850245 12850356 -72588124 - MIR3 SINE MIR -44 164 54 224 240 93 0 chr17 12851309 12851384 -72587096 + MIR SINE MIR 142 223 -39 2030 128 0 0 chr17 12852770 12853128 -72585352 + AluSx SINE Alu 1 358 0 542 280 76 15 chr17 12854061 12854325 -72584155 + L1ME LINE L1 5510 5789 -332 207 100 0 0 chr17 12854325 12854355 -72584125 + (A)n Simple_repeat Simple_repeat 1 30 0 1904 185 40 8 chr17 12854553 12854905 -72583575 - MLT1A1 LTR MaLR -2 363 1 2065 126 90 0 chr17 12855134 12855490 -72582990 - L1MB3 LINE L1 0 6183 5796 234 0 0 0 chr17 12855491 12855517 -72582963 + (TTG)n Simple_repeat Simple_repeat 2 27 0 553 92 0 4 chr17 12855519 12855720 -72582760 - AluSc SINE Alu -31 278 1 1919 186 14 0 chr17 12855720 12856069 -72582411 - L1MB3 LINE L1 -386 5797 5444 225 0 0 0 chr17 12856778 12856803 -72581677 + (TA)n Simple_repeat Simple_repeat 2 26 0 2248 76 38 3 chr17 12856803 12857094 -72581386 - AluY SINE Alu -10 301 1 289 289 107 0 chr17 12857900 12858021 -72580459 + L2 LINE L2 3179 3312 -1 2745 39 0 0 chr17 12858173 12858484 -72579996 - AluY SINE Alu 0 311 1 2042 119 7 0 chr17 12858580 12858866 -72579614 - AluSx SINE Alu -24 288 1 197 333 42 28 chr17 12858933 12859077 -72579403 + L2 LINE L2 2226 2371 -943 2294 95 3 19 chr17 12859336 12859651 -72578829 - AluSg SINE Alu 0 310 1 2401 66 0 13 chr17 12859842 12860144 -72578336 - AluY SINE Alu -1 310 13 3700 242 83 92 chr17 12860387 12860606 -72577874 - L1ME LINE L1 -2669 3411 3191 1917 105 0 0 chr17 12860606 12860885 -72577595 + AluSx SINE Alu 35 313 0 3700 242 83 92 chr17 12860885 12863674 -72574806 - L1ME LINE L1 -2889 3191 494 21 36 0 0 chr17 12863794 12863822 -72574658 + AT_rich Low_complexity Low_complexity 1 28 0 732 263 45 31 chr17 12863999 12864223 -72574257 - MIR SINE MIR -1 261 35 241 325 72 12 chr17 12864675 12864758 -72573722 - L3b LINE CR1 -7 1576 1489 214 301 12 48 chr17 12866726 12866809 -72571671 - L2 LINE L2 -8 3264 3185 2238 70 0 36 chr17 12866866 12867194 -72571286 + AluY SINE Alu 1 311 0 198 209 0 0 chr17 12867390 12867433 -72571047 + (TA)n Simple_repeat Simple_repeat 1 43 0 2320 79 7 0 chr17 12867841 12868133 -72570347 - AluY SINE Alu -17 294 1 210 303 30 0 chr17 12868249 12868315 -72570165 - MIR3 SINE MIR -134 74 7 192 368 132 0 chr17 12869430 12869536 -72568944 - L2 LINE L2 -9 3263 3144 21 0 0 0 chr17 12870623 12870644 -72567836 + AT_rich Low_complexity Low_complexity 1 21 0 248 294 55 46 chr17 12870700 12870809 -72567671 - MIR SINE MIR -118 144 35 602 177 53 0 chr17 12871238 12871351 -72567129 - MER5A DNA MER1_type 0 189 71 808 92 0 0 chr17 12871356 12871465 -72567015 - AluY SINE Alu -2 309 201 * 1154 86 0 0 chr17 12871464 12871603 -72566877 - AluSg1 SINE Alu -170 139 1 303 224 45 0 chr17 12871604 12871671 -72566809 - MER5A DNA MER1_type -114 75 6 351 0 0 0 chr17 12873766 12873805 -72564675 + (CA)n Simple_repeat Simple_repeat 1 39 0 359 294 49 25 chr17 12874281 12874444 -72564036 + MIR3 SINE MIR 42 208 0 1915 142 22 38 chr17 12876141 12876458 -72562022 + AluJb SINE Alu 1 312 0 265 244 163 0 chr17 12877049 12877135 -72561345 + MIR SINE MIR 13 113 -95 339 293 97 63 chr17 12877541 12877872 -72560608 - L2 LINE L2 0 3272 2931 2421 93 0 3 chr17 12878334 12878647 -72559833 + AluSx SINE Alu 1 312 0 966 246 69 4 chr17 12878715 12878975 -72559505 + L1ME LINE L1 5519 5795 -326 1705 224 50 87 chr17 12878982 12879013 -72559467 + LTR9 LTR ERV1 1 32 -580 2489 50 0 47 chr17 12879013 12879331 -72559149 + AluSx SINE Alu 1 303 -9 1705 224 50 87 chr17 12879331 12879934 -72558546 + LTR9 LTR ERV1 32 612 0 235 307 50 10 chr17 12879934 12880035 -72558445 + L1ME LINE L1 5799 5903 -218 2589 53 0 3 chr17 12880182 12880486 -72557994 + AluY SINE Alu 1 303 -8 185 191 0 64 chr17 12881902 12881949 -72556531 - L2 LINE L2 -11 3261 3218 21 0 0 0 chr17 12883667 12883688 -72554792 + AT_rich Low_complexity Low_complexity 1 21 0 334 316 76 33 chr17 12883931 12884206 -72554274 - L1M4 LINE L1 -924 5222 4936 288 269 61 35 chr17 12884325 12884522 -72553958 - L1M4 LINE L1 -1501 4645 4444 24 85 0 0 chr17 12884732 12884791 -72553689 + AT_rich Low_complexity Low_complexity 1 59 0 257 173 58 40 chr17 12884811 12885032 -72553448 + (TA)n Simple_repeat Simple_repeat 1 224 0 215 139 14 42 chr17 12885096 12885168 -72553312 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 286 291 164 8 chr17 12885263 12885507 -72552973 - L1M4 LINE L1 -2150 3996 3715 315 258 115 60 chr17 12885507 12885658 -72552822 - MLT1J2 LTR MaLR -2 448 307 890 203 156 0 chr17 12885658 12885850 -72552630 - MER58A DNA MER1_type -2 222 1 315 258 115 60 chr17 12885850 12885996 -72552484 - MLT1J2 LTR MaLR -143 307 101 2350 99 3 0 chr17 12887918 12888221 -72550259 - AluSp SINE Alu -9 304 1 1837 83 25 8 chr17 12889024 12889265 -72549215 - AluSg SINE Alu -18 292 48 1426 164 0 0 chr17 12889388 12889608 -72548872 + AluJo SINE Alu 82 301 -11 2207 101 13 7 chr17 12889608 12889906 -72548574 + AluSq SINE Alu 1 300 -13 713 292 33 21 chr17 12890973 12891213 -72547267 - MIR SINE MIR 0 262 20 501 307 23 28 chr17 12892007 12892183 -72546297 - L3 LINE CR1 -405 1172 998 2276 109 0 0 chr17 12892471 12892765 -72545715 + AluY SINE Alu 1 294 -17 2291 113 7 0 chr17 12893028 12893338 -72545142 + AluSx SINE Alu 1 312 0 2409 89 0 0 chr17 12893947 12894251 -72544229 - AluSg SINE Alu -6 304 1 322 306 16 33 chr17 12896031 12896152 -72542328 - MIR SINE MIR -91 171 53 2349 96 0 0 chr17 12896415 12896718 -72541762 + AluSq SINE Alu 1 303 -10 250 333 56 21 chr17 12896751 12896895 -72541585 - MIR SINE MIR -16 246 98 194 156 0 0 chr17 12897641 12897673 -72540807 - MIR SINE MIR -67 141 110 320 299 6 0 chr17 12897890 12898067 -72540413 + (CA)n Simple_repeat Simple_repeat 1 178 0 460 244 8 17 chr17 12898278 12898397 -72540083 - MER94 DNA DNA -6 128 11 375 235 0 0 chr17 12898397 12898495 -72539985 + (TA)n Simple_repeat Simple_repeat 2 99 0 3232 84 7 28 chr17 12899301 12899368 -72539112 - L1PB2 LINE L1 -2 6149 6082 2238 100 0 0 chr17 12899368 12899677 -72538803 - AluY SINE Alu -2 309 1 3232 84 7 28 chr17 12899677 12900073 -72538407 - L1PB2 LINE L1 -69 6082 5696 2185 104 3 0 chr17 12900183 12900480 -72538000 - AluSp SINE Alu -15 298 1 2186 83 0 7 chr17 12900872 12901173 -72537307 + AluSx SINE Alu 5 303 -9 2122 98 0 3 chr17 12902019 12902314 -72536166 - AluSx SINE Alu -18 294 1 232 278 0 0 chr17 12902492 12902546 -72535934 - MIR SINE MIR -111 151 98 2250 89 0 19 chr17 12902926 12903241 -72535239 - AluSq SINE Alu -4 309 1 186 43 0 0 chr17 12903817 12903840 -72534640 + (CAG)n Simple_repeat Simple_repeat 1 23 0 1713 182 15 12 chr17 12904079 12904408 -72534072 - MER44D DNA MER2_type -8 601 2 2310 66 3 20 chr17 12904622 12904951 -72533529 - AluSp SINE Alu 0 313 1 673 214 96 45 chr17 12905686 12905864 -72532616 - MSTD LTR MaLR 0 396 210 2206 100 3 0 chr17 12906170 12906470 -72532010 - AluSx SINE Alu -11 301 1 25 0 0 0 chr17 12906476 12906501 -72531979 + AT_rich Low_complexity Low_complexity 1 25 0 232 366 87 37 chr17 12906531 12906692 -72531788 - MIR SINE MIR -74 188 20 853 184 40 67 chr17 12907275 12907326 -72531154 + L1MC5 LINE L1 7535 7586 -375 2135 111 7 0 chr17 12907326 12907633 -72530847 + AluSc SINE Alu 1 309 0 853 184 40 67 chr17 12907633 12907983 -72530497 + L1MC5 LINE L1 7586 7925 -36 308 319 44 31 chr17 12908142 12908302 -72530178 + L1MC4 LINE L1 5357 5518 -2267 24 32 0 0 chr17 12908570 12908601 -72529879 + AT_rich Low_complexity Low_complexity 1 31 0 2094 98 3 3 chr17 12908689 12908975 -72529505 + AluSx SINE Alu 1 286 -26 330 241 149 0 chr17 12908984 12909071 -72529409 - L1MC4 LINE L1 -1339 6703 6604 241 311 0 0 chr17 12909071 12909161 -72529319 + L1MC4 LINE L1 6614 6703 -1339 * 252 255 0 43 chr17 12909089 12909183 -72529297 - L1MC4 LINE L1 -1339 6703 6614 333 255 115 64 chr17 12909193 12909285 -72529195 - L1ME LINE L1 -425 5696 5590 2104 44 44 0 chr17 12909285 12909579 -72528901 - AluY SINE Alu 0 306 1 333 255 115 64 chr17 12909579 12909642 -72528838 - L1ME LINE L1 -531 5590 5532 633 215 166 6 chr17 12909652 12909815 -72528665 - MER5A DNA MER1_type 0 189 1 2231 89 0 0 chr17 12909849 12910140 -72528340 + AluSx SINE Alu 1 291 -21 302 311 72 48 chr17 12910269 12910520 -72527960 - L1ME LINE L1 -768 5378 5122 395 270 51 71 chr17 12910654 12910965 -72527515 - L1ME4a LINE L1 -110 6011 5707 609 249 144 10 chr17 12911004 12911218 -72527262 - MIR SINE MIR -2 260 20 477 208 257 0 chr17 12911278 12911422 -72527058 + MER5A DNA MER1_type 3 183 -6 235 191 14 22 chr17 12911530 12911635 -72526845 + MIR3 SINE MIR 123 202 -6 1125 232 0 0 chr17 12912974 12913198 -72525282 - MER58A DNA MER1_type 0 224 1 882 301 104 19 chr17 12913315 12913504 -72524976 - L2 LINE L2 -14 3299 3128 285 29 0 0 chr17 12913504 12913538 -72524942 + (TG)n Simple_repeat Simple_repeat 2 35 0 882 301 104 19 chr17 12913538 12913558 -72524922 - L2 LINE L2 -185 3128 3111 2248 77 3 0 chr17 12913558 12913844 -72524636 - AluSg SINE Alu -23 287 1 882 301 104 19 chr17 12913844 12914065 -72524415 - L2 LINE L2 -202 3111 2831 438 253 66 24 chr17 12914222 12914388 -72524092 - MIR SINE MIR -6 256 84 1236 120 5 5 chr17 12914771 12914955 -72523525 + AluSg SINE Alu 1 184 -126 642 98 0 0 chr17 12914955 12915037 -72523443 + AluSg SINE Alu 53 134 -176 2043 118 10 0 chr17 12915037 12915343 -72523137 + AluSg SINE Alu 1 309 -1 748 93 0 0 chr17 12916058 12916165 -72522315 + AluSg/x SINE Alu 203 309 -3 2129 105 10 0 chr17 12916930 12917236 -72521244 - AluSx SINE Alu -3 309 1 232 219 148 76 chr17 12917837 12917954 -72520526 + MIR SINE MIR 14 151 -93 2184 119 3 0 chr17 12918209 12918519 -72519961 + AluSq SINE Alu 1 311 -2 268 337 61 17 chr17 12918717 12918898 -72519582 + MER102a DNA MER1_type 127 315 -15 2669 172 12 10 chr17 12919485 12919980 -72518500 + L1MB3 LINE L1 5688 6183 0 244 357 64 0 chr17 12920670 12920827 -72517653 - L2 LINE L2 -1089 2225 2059 262 343 0 0 chr17 12920854 12920924 -72517556 - L2 LINE L2 -85 3228 3159 * 1159 319 202 30 chr17 12920919 12921030 -72517450 - L2 LINE L2 -1789 1525 1434 429 20 0 0 chr17 12921030 12921080 -72517400 + (CA)n Simple_repeat Simple_repeat 1 50 0 2244 63 0 3 chr17 12921080 12921365 -72517115 - AluSc SINE Alu -25 284 1 1159 319 202 30 chr17 12921365 12922434 -72516046 - L2 LINE L2 -1879 1435 141 271 275 25 0 chr17 12924961 12925041 -72513439 + (TA)n Simple_repeat Simple_repeat 2 83 0 380 217 0 29 chr17 12926394 12926532 -72511948 + GA-rich Low_complexity Low_complexity 3 136 0 199 400 23 42 chr17 12927516 12927776 -72510704 + L3 LINE CR1 913 1167 -410 38 75 0 0 chr17 12928331 12928411 -72510069 + AT_rich Low_complexity Low_complexity 1 80 0 782 274 26 22 chr17 12928423 12928653 -72509827 - MIR SINE MIR -31 231 1 858 293 105 38 chr17 12929009 12929408 -72509072 - MLT1K LTR MaLR -153 435 10 286 326 18 80 chr17 12929557 12929781 -72508699 - L2 LINE L2 -212 3060 2851 1423 160 54 164 chr17 12929782 12929812 -72508668 - MLT1B LTR MaLR -11 379 347 1992 92 64 0 chr17 12929812 12930094 -72508386 + AluSg SINE Alu 1 300 -10 1423 160 54 164 chr17 12930094 12930361 -72508119 - MLT1B LTR MaLR -43 347 139 2096 106 3 0 chr17 12930361 12930682 -72507798 - AluSp SINE Alu 0 322 1 1423 160 54 164 chr17 12930682 12930808 -72507672 - MLT1B LTR MaLR -251 139 1 332 345 34 27 chr17 12930819 12930967 -72507513 - L2 LINE L2 -492 2822 2674 2128 106 0 0 chr17 12931112 12931404 -72507076 + AluSx SINE Alu 1 292 -20 876 323 191 31 chr17 12931416 12932901 -72505579 - L2 LINE L2 -650 2664 943 184 315 0 0 chr17 12933000 12933054 -72505426 - L2 LINE L2 -1368 1946 1893 1490 85 0 5 chr17 12933093 12933293 -72505187 + AluSc SINE Alu 100 298 -11 4475 125 11 0 chr17 12933298 12933964 -72504516 + L1PA16 LINE L1 5485 6157 -9 488 159 0 34 chr17 12934203 12934291 -72504189 + AluS SINE Alu 2 86 -227 2199 100 10 0 chr17 12934747 12935056 -72503424 + AluSx SINE Alu 1 312 0 2048 127 0 0 chr17 12935678 12935977 -72502503 - AluSc SINE Alu -10 299 1 2343 86 0 0 chr17 12937102 12937404 -72501076 - AluSx SINE Alu -10 302 1 256 250 12 0 chr17 12937474 12937554 -72500926 + (TG)n Simple_repeat Simple_repeat 1 81 0 244 311 48 90 chr17 12937751 12937909 -72500571 + L2 LINE L2 3035 3187 -85 2549 39 7 0 chr17 12937909 12938218 -72500262 - AluY SINE Alu 0 311 1 1917 135 24 9 chr17 12938485 12938585 -72499895 + MER44D DNA MER2_type 1 98 -2393 2179 108 0 0 chr17 12938585 12938882 -72499598 + AluSx SINE Alu 1 297 -15 1917 135 24 9 chr17 12938882 12939115 -72499365 + MER44D DNA MER2_type 98 609 0 276 282 134 7 chr17 12940137 12940279 -72498201 + MIR3 SINE MIR 47 206 -2 2259 88 0 0 chr17 12940774 12941069 -72497411 + AluY SINE Alu 1 295 -16 2279 91 0 0 chr17 12941071 12941369 -72497111 - AluSq SINE Alu -15 298 1 204 211 0 0 chr17 12943302 12943340 -72495140 + CT-rich Low_complexity Low_complexity 3 40 0 1410 155 4 0 chr17 12943340 12943566 -72494914 - AluJb SINE Alu -1 311 85 314 335 66 11 chr17 12944163 12944345 -72494135 + MIR SINE MIR 23 214 -48 2322 93 0 0 chr17 12944666 12944976 -72493504 + AluY SINE Alu 1 310 -1 490 305 14 0 chr17 12945641 12945782 -72492698 - MIR SINE MIR -21 241 99 686 108 9 18 chr17 12946374 12946485 -72491995 + FLAM_A SINE Alu 33 142 0 200 170 43 0 chr17 12946661 12946708 -72491772 + GA-rich Low_complexity Low_complexity 6 54 0 1549 192 0 10 chr17 12947562 12947864 -72490616 - AluJb SINE Alu -13 299 1 376 259 58 36 chr17 12947988 12948127 -72490353 - MER103 DNA DNA -15 151 10 2224 95 0 20 chr17 12948940 12949236 -72489244 - AluSx SINE Alu -22 290 1 245 163 70 0 chr17 12949917 12949960 -72488520 - MLT1H1 LTR MaLR 0 555 510 * 303 226 226 20 chr17 12949929 12950031 -72488449 - MLT1G1 LTR MaLR -15 580 458 798 292 63 35 chr17 12950197 12950564 -72487916 - MLT1G1 LTR MaLR -168 413 11 725 244 182 62 chr17 12950598 12950664 -72487816 - MLT1D LTR MaLR 0 505 448 2371 88 3 3 chr17 12950664 12950971 -72487509 - AluSp SINE Alu -6 307 1 725 244 182 62 chr17 12950971 12951355 -72487125 - MLT1D LTR MaLR -57 448 1 28 29 0 0 chr17 12951629 12951664 -72486816 + AT_rich Low_complexity Low_complexity 1 35 0 2227 102 7 0 chr17 12951989 12952282 -72486198 - AluSp SINE Alu -18 295 1 2038 115 0 11 chr17 12952871 12953150 -72485330 + AluSx SINE Alu 1 276 -36 2348 92 7 0 chr17 12953152 12953447 -72485033 - AluSg SINE Alu -13 297 1 287 285 131 40 chr17 12955150 12955448 -72483032 + L1M4 LINE L1 3847 4171 -1975 354 283 54 38 chr17 12955970 12956154 -72482326 + MARNA DNA Mariner 43 229 -357 199 284 90 0 chr17 12956297 12956364 -72482116 + MIR3 SINE MIR 127 199 -9 2083 98 7 27 chr17 12956477 12956772 -72481708 + AluSp SINE Alu 1 289 -24 225 180 0 0 chr17 12956818 12956868 -72481612 + (TG)n Simple_repeat Simple_repeat 2 51 0 184 277 0 0 chr17 12957233 12957280 -72481200 + MIR SINE MIR 103 149 -113 2715 184 38 10 chr17 12958316 12958892 -72479588 + L1MB7 LINE L1 5593 6184 0 2649 169 60 44 chr17 12959388 12959537 -72478943 - L1MB3 LINE L1 -28 6155 6010 2097 116 0 35 chr17 12959537 12959855 -72478625 + AluSx SINE Alu 1 307 -5 2649 169 60 44 chr17 12959855 12960272 -72478208 - L1MB3 LINE L1 -173 6010 5580 1280 79 37 0 chr17 12960848 12961012 -72477468 + AluY SINE Alu 141 310 -1 316 324 0 9 chr17 12961870 12961975 -72476505 + MER5B DNA MER1_type 75 178 0 701 300 17 17 chr17 12962329 12962566 -72475914 + MIR SINE MIR 14 250 -12 343 370 16 48 chr17 12963713 12963964 -72474516 - L1ME LINE L1 -352 5818 5575 296 336 49 0 chr17 12964731 12964874 -72473606 + L2 LINE L2 3164 3313 0 303 28 0 0 chr17 12964983 12965019 -72473461 + (TG)n Simple_repeat Simple_repeat 2 37 0 2153 121 3 3 chr17 12965040 12965347 -72473133 - AluSx SINE Alu -5 307 1 212 309 41 10 chr17 12965993 12966090 -72472390 - L2 LINE L2 -784 2530 2431 519 198 8 132 chr17 12966866 12966924 -72471556 + L1MC5 LINE L1 7623 7687 -274 2297 95 0 7 chr17 12966924 12967218 -72471262 - AluSx SINE Alu -20 292 1 519 198 8 132 chr17 12967218 12967241 -72471239 + L1MC5 LINE L1 7687 7711 -250 945 108 15 0 chr17 12967241 12967371 -72471109 - FLAM_C SINE Alu -1 132 1 519 198 8 132 chr17 12967371 12967531 -72470949 + L1MC5 LINE L1 7711 7835 -126 1711 123 108 0 chr17 12967676 12967931 -72470549 + AluSx SINE Alu 1 284 -24 207 0 0 0 chr17 12967931 12967954 -72470526 + (CTAAG)n Simple_repeat Simple_repeat 2 24 0 2312 104 3 0 chr17 12968425 12968723 -72469757 + AluSx SINE Alu 1 299 -13 216 228 0 0 chr17 12968874 12968931 -72469549 + GA-rich Low_complexity Low_complexity 2 58 0 2261 96 0 17 chr17 12968946 12969247 -72469233 + AluSc SINE Alu 1 296 -13 852 168 0 0 chr17 12970529 12970660 -72467820 + FLAM_A SINE Alu 1 131 -2 2134 124 0 3 chr17 12971291 12971590 -72466890 + AluSg SINE Alu 3 300 -10 1136 188 9 23 chr17 12972172 12972390 -72466090 - MER20 DNA MER1_type -4 215 1 2506 74 0 3 chr17 12973969 12974280 -72464200 + AluY SINE Alu 1 310 -1 211 269 172 21 chr17 12974383 12974476 -72464004 + L2 LINE L2 3166 3272 0 189 0 0 0 chr17 12975131 12975152 -72463328 + (T)n Simple_repeat Simple_repeat 1 21 0 2012 110 11 0 chr17 12975652 12975916 -72462564 - AluSx SINE Alu -45 267 1 3710 188 81 26 chr17 12976028 12976841 -72461639 + L1MCa LINE L1 20 877 -5549 4881 163 19 9 chr17 12976841 12977712 -72460768 + L1MC1 LINE L1 5454 6333 0 2180 125 14 0 chr17 12978147 12978443 -72460037 - AluSx SINE Alu -12 300 1 948 175 26 10 chr17 12978899 12979093 -72459387 - L1MC1 LINE L1 -146 6187 5991 2524 60 3 0 chr17 12979588 12979888 -72458592 + AluY SINE Alu 1 301 -10 345 267 82 51 chr17 12980747 12981142 -72457338 + L1P LINE L1 4639 5060 -1086 682 276 46 86 chr17 12981314 12981854 -72456626 + L1MC4a LINE L1 5263 5823 -1985 351 0 0 0 chr17 12981854 12981893 -72456587 + (TG)n Simple_repeat Simple_repeat 2 40 0 682 276 46 86 chr17 12981893 12981936 -72456544 + L1MC4a LINE L1 5823 5866 -1942 2534 59 0 10 chr17 12981936 12982243 -72456237 + AluY SINE Alu 1 304 -7 682 276 46 86 chr17 12982243 12982353 -72456127 + L1MC4a LINE L1 5866 5929 -1879 2155 121 0 0 chr17 12982363 12982683 -72455797 + AluSx SINE Alu 1 320 0 2187 127 0 13 chr17 12983197 12983513 -72454967 + AluSq SINE Alu 1 312 -1 319 315 11 0 chr17 12984966 12985058 -72453422 + Charlie8 DNA MER1_type 163 255 -2162 772 127 33 104 chr17 12985132 12985344 -72453136 - L1MA7 LINE L1 -2 6289 6093 21 0 0 0 chr17 12985790 12985811 -72452669 + AT_rich Low_complexity Low_complexity 1 21 0 455 254 78 74 chr17 12985979 12986263 -72452217 - Charlie8 DNA MER1_type -2132 285 1 25 75 0 0 chr17 12987147 12987200 -72451280 + AT_rich Low_complexity Low_complexity 1 53 0 346 200 11 42 chr17 12987211 12987306 -72451174 - L1MC4 LINE L1 -1339 6703 6612 263 56 74 0 chr17 12987306 12987360 -72451120 + (TA)n Simple_repeat Simple_repeat 1 58 0 2207 117 0 0 chr17 12987361 12987652 -72450828 - AluSx SINE Alu -21 291 1 1494 181 93 34 chr17 12988825 12989178 -72449302 - MLT1B LTR MaLR -13 377 4 2276 81 13 32 chr17 12990218 12990526 -72447954 + AluSq SINE Alu 1 302 -11 1030 73 0 0 chr17 12990908 12991031 -72447449 + AluSq SINE Alu 73 195 -118 740 278 82 28 chr17 12991300 12991688 -72446792 - MER113 DNA MER1_type? -7 514 106 298 302 16 40 chr17 12991965 12992091 -72446389 - MIR3 SINE MIR -72 136 14 1455 150 0 26 chr17 12992161 12992394 -72446086 + AluJo SINE Alu 74 300 -12 1922 117 0 0 chr17 12992396 12992692 -72445788 + AluSq SINE Alu 29 324 0 610 281 128 40 chr17 12993072 12993340 -72445140 + L2 LINE L2 2825 3149 -164 2530 60 3 3 chr17 12993340 12993640 -72444840 - AluY SINE Alu -11 300 1 610 281 128 40 chr17 12993640 12993816 -72444664 + L2 LINE L2 3149 3308 -5 2391 102 0 0 chr17 12994049 12994353 -72444127 + AluSx SINE Alu 1 304 -8 1521 155 21 14 chr17 12994446 12994737 -72443743 - L1MA9 LINE L1 -11 6301 6009 690 215 85 60 chr17 12995854 12996032 -72442448 - MER3 DNA MER1_type -4 205 20 1511 182 109 121 chr17 12996032 12996593 -72441887 + MLT2B3 LTR ERVL 1 554 0 690 215 85 60 chr17 12996593 12996614 -72441866 - MER3 DNA MER1_type -189 20 1 1248 142 83 9 chr17 12996628 12996846 -72441634 - MER46A DNA MER2_type -1 235 2 2312 103 0 3 chr17 12997050 12997350 -72441130 + AluSx SINE Alu 1 299 -13 240 209 58 70 chr17 12998326 12998412 -72440068 + L1M4 LINE L1 4488 4572 -1574 1387 160 0 0 chr17 12998477 12998702 -72439778 + AluSg/x SINE Alu 80 304 -6 2355 68 0 17 chr17 12998906 12999202 -72439278 - AluSq SINE Alu -2 311 21 445 285 165 16 chr17 12999204 12999647 -72438833 - L1MC4a LINE L1 -616 5546 5267 2153 127 0 3 chr17 12999744 13000036 -72438444 - AluSx SINE Alu -8 304 14 498 119 0 0 chr17 13000036 13000103 -72438377 - AluS SINE Alu -246 67 1 404 230 251 15 chr17 13000111 13000437 -72438043 - HAL1 LINE L1 -134 2373 1971 24 0 0 0 chr17 13000563 13000587 -72437893 + AT_rich Low_complexity Low_complexity 1 24 0 3473 253 89 59 chr17 13000604 13002480 -72436000 - HAL1 LINE L1 -564 1943 11 353 288 94 67 chr17 13002518 13002889 -72435591 - L1MDa LINE L1 -3907 2633 2253 599 165 45 38 chr17 13002920 13003006 -72435474 + MER34B LTR ERV1 294 378 -164 2098 106 11 0 chr17 13003006 13003288 -72435192 + AluSx SINE Alu 18 302 -10 599 165 45 38 chr17 13003288 13003442 -72435038 + MER34B LTR ERV1 378 512 -30 249 252 91 14 chr17 13003623 13003823 -72434657 - HAL1b LINE L1 -861 1646 428 272 288 111 73 chr17 13003899 13004608 -72433872 - L1MDa LINE L1 -4880 1650 915 2319 92 0 25 chr17 13005230 13005547 -72432933 + AluSq SINE Alu 1 309 -4 2999 191 78 21 chr17 13005633 13006390 -72432090 + L1MB5 LINE L1 5349 6148 -26 1945 165 0 16 chr17 13006766 13007082 -72431398 - AluJo SINE Alu -1 311 1 1716 173 76 31 chr17 13007125 13007507 -72430973 + MER21B LTR ERV1 412 810 -53 1285 153 24 5 chr17 13007594 13007803 -72430677 + MER20 DNA MER1_type 4 216 -3 2089 95 0 41 chr17 13008543 13008837 -72429643 + AluSg SINE Alu 21 302 -8 382 314 60 69 chr17 13008868 13009202 -72429278 - L1MC4a LINE L1 -1731 6077 5747 2192 95 7 13 chr17 13009329 13009635 -72428845 + AluSc SINE Alu 1 304 -5 1607 50 5 0 chr17 13009930 13010129 -72428351 + L1PB1 LINE L1 5948 6147 -4 21 0 0 0 chr17 13010129 13010150 -72428330 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 13010548 13010594 -72427886 + (CA)n Simple_repeat Simple_repeat 2 47 0 * 482 0 17 0 chr17 13010593 13010651 -72427829 + (TC)n Simple_repeat Simple_repeat 1 59 0 577 303 27 27 chr17 13010829 13011050 -72427430 - MIR SINE MIR -11 251 31 635 314 106 20 chr17 13011250 13011931 -72426549 - L2 LINE L2 -148 3165 2424 233 350 21 14 chr17 13011946 13012089 -72426391 + L2 LINE L2 2066 2209 -1105 418 326 130 47 chr17 13012114 13012511 -72425969 + L2 LINE L2 2466 2829 -443 2471 93 0 7 chr17 13012511 13012821 -72425659 + AluSq SINE Alu 1 308 -5 418 326 130 47 chr17 13012821 13013146 -72425334 + L2 LINE L2 2829 3266 -6 2345 101 3 0 chr17 13013308 13013616 -72424864 + AluSg SINE Alu 1 309 -1 2290 89 0 0 chr17 13014466 13014778 -72423702 + AluSc SINE Alu 1 312 0 280 274 0 0 chr17 13015070 13015143 -72423337 + MLT1L LTR MaLR 322 394 -221 1749 185 143 17 chr17 13015268 13015738 -72422742 + MER74A LTR ERVL 3 531 -27 180 0 0 0 chr17 13016004 13016024 -72422456 + (A)n Simple_repeat Simple_repeat 1 20 0 5530 48 3 13 chr17 13017464 13018165 -72420315 - L1PA5 LINE L1 -3 6151 5458 1170 55 0 0 chr17 13018169 13018334 -72420146 + L1PA5 LINE L1 5281 5445 -709 951 118 0 0 chr17 13018575 13018711 -72419769 - AluSc SINE Alu 0 309 174 282 95 0 0 chr17 13019407 13019449 -72419031 + (TC)n Simple_repeat Simple_repeat 2 43 0 252 188 0 0 chr17 13019459 13019528 -72418952 + (CA)n Simple_repeat Simple_repeat 2 70 0 5824 207 85 66 chr17 13019671 13021645 -72416835 + L1ME1 LINE L1 1 2017 -4523 2099 93 24 10 chr17 13021645 13021936 -72416544 + AluSx SINE Alu 1 295 -17 5824 207 85 66 chr17 13021936 13021986 -72416494 + L1ME1 LINE L1 2017 2065 -4475 375 178 0 0 chr17 13021989 13022062 -72416418 + L1ME1 LINE L1 2277 2349 -4191 1370 254 46 6 chr17 13022078 13022444 -72416036 + MSTD LTR MaLR 3 383 -13 5948 227 78 50 chr17 13022447 13024133 -72414347 + MSTD-int LTR MaLR 3 1735 0 1349 207 134 9 chr17 13024143 13024486 -72413994 + MSTD LTR MaLR 11 396 0 6766 232 75 40 chr17 13024486 13026195 -72412285 + L1ME1 LINE L1 2387 4034 -2526 1461 176 10 52 chr17 13026195 13026485 -72411995 + AluJb SINE Alu 1 278 -34 186 103 0 0 chr17 13026485 13026514 -72411966 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 6766 232 75 40 chr17 13026514 13028176 -72410304 + L1ME1 LINE L1 4034 5635 -925 249 57 0 0 chr17 13028176 13028211 -72410269 + (CA)n Simple_repeat Simple_repeat 2 36 0 6766 232 75 40 chr17 13028211 13028382 -72410098 + L1ME1 LINE L1 5635 5798 -762 252 0 0 0 chr17 13028382 13028410 -72410070 + (CA)n Simple_repeat Simple_repeat 2 29 0 6766 232 75 40 chr17 13028410 13028537 -72409943 + L1ME1 LINE L1 5798 5919 -641 2216 100 0 0 chr17 13028537 13028841 -72409639 + AluSg SINE Alu 2 305 0 6766 232 75 40 chr17 13028841 13029189 -72409291 + L1ME1 LINE L1 5919 6542 -18 343 342 150 18 chr17 13029294 13029627 -72408853 + L1ME3A LINE L1 2022 2398 -3998 321 293 108 48 chr17 13029655 13029904 -72408576 + L1ME3A LINE L1 2421 2684 -3531 297 248 93 30 chr17 13029961 13030231 -72408249 + L1ME3A LINE L1 2785 3071 -3144 443 268 116 80 chr17 13030290 13031734 -72406746 + L1ME3A LINE L1 3190 4719 -1496 1439 199 16 32 chr17 13031734 13032050 -72406430 + AluJo SINE Alu 1 311 -1 443 268 116 80 chr17 13032050 13032481 -72405999 + L1ME3A LINE L1 4719 5133 -1082 390 316 68 25 chr17 13032621 13033281 -72405199 + L1ME3A LINE L1 5335 6013 -226 1038 158 72 7 chr17 13033696 13033977 -72404503 + Tigger2a DNA MER2_type 34 422 -22 271 226 20 0 chr17 13034000 13034102 -72404378 + (TA)n Simple_repeat Simple_repeat 1 104 0 3852 65 27 0 chr17 13034236 13034747 -72403733 + L1PB1 LINE L1 5625 6149 -2 258 280 13 0 chr17 13034963 13035038 -72403442 - L3 LINE CR1 -20 1557 1482 373 250 71 14 chr17 13035509 13035649 -72402831 - MER103 DNA DNA -1 165 18 1794 51 0 0 chr17 13035973 13036187 -72402293 - AluY SINE Alu -18 293 80 2311 102 7 3 chr17 13036798 13037103 -72401377 - AluSc SINE Alu -3 306 1 1134 246 82 40 chr17 13037253 13037704 -72400776 - MER74A LTR ERVL 0 558 89 2397 78 0 0 chr17 13037779 13038073 -72400407 - AluSq SINE Alu -19 294 1 1831 159 13 10 chr17 13038120 13038422 -72400058 - AluJo SINE Alu -7 305 3 1035 168 40 6 chr17 13038488 13038661 -72399819 + MER5A DNA MER1_type 11 189 0 2189 119 0 3 chr17 13038990 13039284 -72399196 - AluSq SINE Alu -18 295 3 398 279 66 35 chr17 13039417 13039626 -72398854 + MLT1L LTR MaLR 112 392 -202 2181 115 0 19 chr17 13039760 13040119 -72398361 - AluSx SINE Alu 0 312 1 200 302 52 42 chr17 13040368 13040464 -72398016 - L2 LINE L2 -209 3063 2967 237 281 117 31 chr17 13041057 13041253 -72397227 + HAL1 LINE L1 1425 1637 -870 2638 116 7 30 chr17 13041723 13042020 -72396460 - MSTA LTR MaLR 0 428 143 2126 142 131 8 chr17 13042020 13042401 -72396079 + MSTA LTR MaLR 1 428 0 2638 116 7 30 chr17 13042401 13042541 -72395939 - MSTA LTR MaLR -285 143 1 352 252 0 37 chr17 13042720 13042827 -72395653 + A-rich Low_complexity Low_complexity 4 106 0 329 279 55 62 chr17 13042932 13043222 -72395258 + HAL1 LINE L1 2210 2497 -10 465 244 24 0 chr17 13043233 13043360 -72395120 + L1ME4a LINE L1 5479 5608 -513 1794 164 34 10 chr17 13043393 13043686 -72394794 + AluJo SINE Alu 1 300 -12 326 243 208 7 chr17 13043864 13044008 -72394472 + L1ME4a LINE L1 5843 6015 -106 960 171 25 20 chr17 13044079 13044278 -72394202 + L1MB3 LINE L1 5972 6171 -12 26 0 0 0 chr17 13044282 13044308 -72394172 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr17 13044749 13044781 -72393699 + AT_rich Low_complexity Low_complexity 1 32 0 2302 89 3 10 chr17 13044784 13045087 -72393393 + AluSg SINE Alu 5 305 -5 391 86 14 14 chr17 13045087 13045157 -72393323 + (TA)n Simple_repeat Simple_repeat 2 71 0 1715 176 29 13 chr17 13045310 13045691 -72392789 + MLT1B LTR MaLR 1 387 -3 698 224 126 85 chr17 13046684 13047224 -72391256 + MER34B LTR ERV1 1 562 -3 2509 69 3 0 chr17 13047923 13048227 -72390253 - AluY SINE Alu -6 305 1 258 303 124 21 chr17 13048470 13048615 -72389865 - HAL1 LINE L1 -957 1550 1391 879 242 166 5 chr17 13049573 13049994 -72388486 + MLT1G1 LTR MaLR 1 587 -8 23 0 0 0 chr17 13050225 13050248 -72388232 + AT_rich Low_complexity Low_complexity 1 23 0 289 385 44 7 chr17 13050420 13050555 -72387925 + MIR3 SINE MIR 30 169 -39 42 0 0 0 chr17 13050555 13050597 -72387883 + AT_rich Low_complexity Low_complexity 1 42 0 901 140 0 22 chr17 13050593 13050729 -72387751 - FLAM_C SINE Alu 0 133 1 1771 133 68 31 chr17 13050729 13051022 -72387458 - AluJb SINE Alu -8 304 1 187 220 0 60 chr17 13051112 13051162 -72387318 - MIR3 SINE MIR -54 154 108 473 297 171 24 chr17 13051366 13051612 -72386868 - MLT1K LTR MaLR -70 518 237 2194 164 28 89 chr17 13051612 13051800 -72386680 + MLT1D LTR MaLR 1 199 -306 2155 110 21 0 chr17 13051800 13052090 -72386390 + AluSx SINE Alu 1 296 -16 2194 164 28 89 chr17 13052090 13052439 -72386041 + MLT1D LTR MaLR 199 505 0 821 156 7 15 chr17 13052444 13052579 -72385901 + AluSq/x SINE Alu 2 135 -177 2036 139 20 0 chr17 13052579 13052881 -72385599 + AluSx SINE Alu 1 308 -4 536 336 137 0 chr17 13052901 13053112 -72385368 - MLT1K LTR MaLR -346 242 3 233 158 0 26 chr17 13053180 13053218 -72385262 - Alu SINE Alu -181 121 85 1226 254 61 80 chr17 13053515 13054054 -72384426 + MER74A LTR ERVL 1 529 -29 2021 182 70 22 chr17 13054328 13054639 -72383841 - MLT1C LTR MaLR 0 467 127 2372 117 45 28 chr17 13054639 13054997 -72383483 + THE1B LTR MaLR 1 364 0 2021 182 70 22 chr17 13054997 13055129 -72383351 - MLT1C LTR MaLR -340 127 3 180 250 0 135 chr17 13055249 13055345 -72383135 - L3 LINE CR1 -23 1554 1472 432 0 0 0 chr17 13055921 13055969 -72382511 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 1031 209 94 94 chr17 13056128 13056502 -72381978 + MSTD LTR MaLR 19 392 -4 600 281 115 5 chr17 13056903 13057120 -72381360 - MIR SINE MIR -17 245 5 238 193 70 0 chr17 13058379 13058436 -72380044 + L1 LINE L1 5201 5261 -885 207 100 0 0 chr17 13058460 13058490 -72379990 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 428 121 15 15 chr17 13058493 13058559 -72379921 - FLAM_A SINE Alu -23 119 54 2508 81 3 0 chr17 13058749 13059058 -72379422 - AluSp SINE Alu -3 310 1 304 370 86 19 chr17 13059068 13059325 -72379155 - L1MC4a LINE L1 -1875 5933 5660 1168 130 60 27 chr17 13060452 13060773 -72377707 + MLT2A2 LTR ERVL 205 452 -1 440 284 31 67 chr17 13060846 13060894 -72377586 + L1M4 LINE L1 3061 3109 -3037 2363 79 7 0 chr17 13060894 13061186 -72377294 + AluY SINE Alu 1 294 -17 440 284 31 67 chr17 13061186 13061391 -72377089 + L1M4 LINE L1 3109 3305 -2841 1917 78 127 4 chr17 13062000 13062268 -72376212 + AluSp SINE Alu 1 301 -2 231 312 142 7 chr17 13062656 13062797 -72375683 - MIR3 SINE MIR -4 204 45 495 224 65 0 chr17 13062882 13062989 -72375491 - L2 LINE L2 0 3313 3200 193 272 39 107 chr17 13063028 13063131 -72375349 - L2 LINE L2 -3204 110 15 297 324 35 35 chr17 13063469 13063614 -72374866 + MIR3 SINE MIR 57 201 -7 234 0 0 0 chr17 13064140 13064166 -72374314 + (A)n Simple_repeat Simple_repeat 1 26 0 2408 77 3 3 chr17 13064670 13064969 -72373511 - AluSp SINE Alu -14 299 1 187 184 61 0 chr17 13065027 13065076 -72373404 - L2 LINE L2 -80 3233 3182 2400 31 41 14 chr17 13065930 13066222 -72372258 + AluY SINE Alu 1 300 -11 262 344 40 55 chr17 13068096 13068204 -72370276 - L2 LINE L2 -27 3286 3178 2445 89 0 0 chr17 13068204 13068507 -72369973 - AluSc SINE Alu -6 303 1 262 344 40 55 chr17 13068507 13068651 -72369829 - L2 LINE L2 -135 3178 3038 1788 249 45 79 chr17 13068825 13069176 -72369304 + L1ME LINE L1 6 367 -5703 2006 208 26 0 chr17 13069176 13069560 -72368920 + MSTD LTR MaLR 1 394 -2 1788 249 45 79 chr17 13069560 13069778 -72368702 + L1ME LINE L1 367 591 -5479 2146 125 3 3 chr17 13069778 13070083 -72368397 + AluSx SINE Alu 1 305 -7 1788 249 45 79 chr17 13070083 13070364 -72368116 + L1ME LINE L1 591 828 -5242 823 181 163 0 chr17 13071058 13071218 -72367262 + MER5A DNA MER1_type 2 187 -2 1692 143 7 22 chr17 13071290 13071562 -72366918 - AluJb SINE Alu 0 312 45 253 245 326 0 chr17 13071582 13071680 -72366800 + MER5B DNA MER1_type 46 175 -3 304 203 14 14 chr17 13071880 13071949 -72366531 + MER69 DNA AcHobo 2456 2524 -2 395 270 87 0 chr17 13071950 13072065 -72366415 - MIR SINE MIR -112 150 26 423 52 0 0 chr17 13072082 13072140 -72366340 + (TG)n Simple_repeat Simple_repeat 1 58 0 1518 166 72 8 chr17 13072153 13072418 -72366062 - AluSx SINE Alu -30 282 1 220 276 52 0 chr17 13072548 13072606 -72365874 - MER91 DNA MER1_type -3 187 127 23 0 0 0 chr17 13073554 13073577 -72364903 + AT_rich Low_complexity Low_complexity 1 23 0 1927 119 0 107 chr17 13074728 13075064 -72363416 + AluSq SINE Alu 1 300 -3 390 318 62 47 chr17 13076007 13076281 -72362199 - L3 LINE CR1 -1077 500 223 784 114 0 0 chr17 13076320 13076425 -72362055 - L1MA3 LINE L1 -7 6298 6194 2735 217 39 24 chr17 13076425 13077053 -72361427 - L1M4 LINE L1 -3108 3038 2396 2259 104 0 29 chr17 13077053 13077369 -72361111 - AluSx SINE Alu -5 307 1 2735 217 39 24 chr17 13077369 13077454 -72361026 - L1M4 LINE L1 -3750 2396 2314 3506 121 22 15 chr17 13077558 13078096 -72360384 + L1MB2 LINE L1 5623 6164 -7 21 0 0 0 chr17 13078096 13078117 -72360363 + AT_rich Low_complexity Low_complexity 1 21 0 230 170 0 21 chr17 13079019 13079066 -72359414 + L2 LINE L2 3190 3235 -78 550 111 0 81 chr17 13079193 13079292 -72359188 - AluJ/FRAM SINE Alu 0 312 222 3044 149 39 16 chr17 13079582 13080168 -72358312 + MER4B LTR ERV1 3 779 0 476 141 0 59 chr17 13080925 13080969 -72357511 + MER67A LTR ERV1 1 39 -504 3859 162 5 70 chr17 13080969 13081708 -72356772 + LTR8 LTR ERV1 1 691 0 476 141 0 59 chr17 13081708 13081748 -72356732 + MER67A LTR ERV1 39 80 -463 2598 197 71 47 chr17 13081748 13082393 -72356087 + MER67B LTR ERV1 1 661 0 413 270 158 23 chr17 13082430 13082645 -72355835 + MIR SINE MIR 3 246 -16 405 296 22 37 chr17 13083023 13083158 -72355322 - MIR3 SINE MIR -26 182 50 701 304 140 22 chr17 13083725 13084126 -72354354 - L2 LINE L2 -1 3312 2865 648 282 118 66 chr17 13084595 13084785 -72353695 + L1ME2 LINE L1 3543 3722 -2424 2427 75 0 28 chr17 13084785 13085105 -72353375 + AluY SINE Alu 1 311 0 648 282 118 66 chr17 13085105 13085567 -72352913 + L1ME2 LINE L1 3722 4229 -1917 272 173 49 62 chr17 13085567 13085648 -72352832 - MER116 DNA Mariner 0 80 1 1828 104 40 0 chr17 13085684 13085933 -72352547 - AluSx SINE Alu -8 304 46 237 269 69 35 chr17 13086216 13086361 -72352119 - L1M4 LINE L1 -2326 3820 3671 1393 91 17 65 chr17 13087438 13087670 -72350810 + L1PA13 LINE L1 5939 6159 -4 398 315 55 65 chr17 13087842 13087937 -72350543 - L2 LINE L2 -4 3309 3215 2139 144 76 30 chr17 13087937 13088294 -72350186 + MLT2D LTR ERVL 1 379 -35 246 32 0 0 chr17 13088294 13088325 -72350155 + (CA)n Simple_repeat Simple_repeat 1 31 0 2139 144 76 30 chr17 13088325 13088363 -72350117 + MLT2D LTR ERVL 379 414 0 398 315 55 65 chr17 13088363 13088398 -72350082 - L2 LINE L2 -98 3215 3181 1922 142 3 7 chr17 13088398 13088687 -72349793 + AluJb SINE Alu 1 288 -24 398 315 55 65 chr17 13088687 13089149 -72349331 - L2 LINE L2 -132 3181 2649 654 254 36 6 chr17 13089295 13089460 -72349020 + L2 LINE L2 2573 2742 -572 1070 321 132 43 chr17 13089517 13090551 -72347929 - L2 LINE L2 -1061 2253 1129 1134 236 164 0 chr17 13091334 13091626 -72346854 + MER58B DNA MER1_type 1 340 -1 187 313 156 21 chr17 13093116 13093212 -72345268 + L2 LINE L2 3136 3244 -28 21 36 0 0 chr17 13093388 13093416 -72345064 + AT_rich Low_complexity Low_complexity 1 28 0 455 113 0 0 chr17 13093420 13093491 -72344989 + L1MA5A LINE L1 6226 6296 -1 2211 241 78 20 chr17 13093494 13094559 -72343921 + L1ME2 LINE L1 4794 5928 -236 7780 242 77 23 chr17 13094560 13096317 -72342163 - L1M4 LINE L1 -1250 4896 2968 740 105 30 75 chr17 13096317 13096450 -72342030 - L1MA3 LINE L1 0 6305 6179 7780 242 77 23 chr17 13096450 13097143 -72341337 - L1M4 LINE L1 -3178 2968 2314 290 234 113 32 chr17 13097149 13097273 -72341207 - L1M4 LINE L1 -1851 4295 4162 236 241 89 36 chr17 13098059 13098171 -72340309 + MIR SINE MIR 28 145 -117 2532 66 0 0 chr17 13099194 13099499 -72338981 + AluSx SINE Alu 1 305 -7 221 329 0 0 chr17 13100182 13100258 -72338222 + (TA)n Simple_repeat Simple_repeat 2 77 0 303 247 68 89 chr17 13101534 13101680 -72336800 + L2 LINE L2 3124 3266 -6 912 244 68 24 chr17 13101702 13101997 -72336483 + MLT1C LTR MaLR 4 311 -156 392 246 55 0 chr17 13102018 13102128 -72336352 - MER21B LTR ERV1 -124 739 624 473 159 0 0 chr17 13102134 13102203 -72336277 + Tigger2 DNA MER2_type 1 69 -2649 * 2719 127 39 7 chr17 13102192 13102388 -72336092 + Tigger2 DNA MER2_type 2273 2461 -257 2587 57 0 16 chr17 13102388 13102704 -72335776 - AluY SINE Alu 0 311 1 2719 127 39 7 chr17 13102704 13102939 -72335541 + Tigger2 DNA MER2_type 2461 2718 0 1072 270 67 47 chr17 13102944 13103374 -72335106 - MER21B LTR ERV1 -406 457 19 855 194 11 12 chr17 13103381 13103552 -72334928 + MLT1C LTR MaLR 307 467 0 2417 103 54 14 chr17 13104065 13104415 -72334065 + THE1B LTR MaLR 1 364 0 10372 112 32 34 chr17 13104415 13105999 -72332481 + THE1B-int LTR MaLR 1 1580 0 2696 115 0 6 chr17 13105999 13106365 -72332115 + THE1B LTR MaLR 1 364 0 1671 182 21 52 chr17 13106578 13106963 -72331517 + MER93b LTR ERV1 1 373 0 523 301 7 13 chr17 13106963 13107116 -72331364 - MIR SINE MIR -96 166 15 286 228 193 18 chr17 13107205 13107319 -72331161 - MER94 DNA DNA 0 134 1 1243 253 119 13 chr17 13107650 13108029 -72330451 + LTR16A LTR ERVL 26 444 -6 371 274 28 78 chr17 13109201 13109380 -72329100 + MLT1L LTR MaLR 8 177 -438 378 267 120 42 chr17 13109610 13109801 -72328679 + MLT1L LTR MaLR 410 615 0 386 157 56 22 chr17 13109811 13109900 -72328580 + MER103 DNA DNA 52 143 -23 566 198 0 9 chr17 13110113 13110219 -72328261 + FRAM SINE Alu 42 146 -30 2046 146 0 19 chr17 13110328 13110463 -72328017 + AluSx SINE Alu 1 137 -175 2436 73 10 7 chr17 13110463 13110764 -72327716 + AluSx SINE Alu 1 302 -10 387 0 0 0 chr17 13110764 13110807 -72327673 + (TA)n Simple_repeat Simple_repeat 1 43 0 2046 146 0 19 chr17 13110807 13110985 -72327495 + AluSx SINE Alu 135 309 -3 342 176 15 15 chr17 13111444 13111512 -72326968 + LTR67 LTR ERVL 487 554 -3 367 253 182 52 chr17 13111856 13112180 -72326300 - L1ME4a LINE L1 -22 6099 5734 227 341 60 33 chr17 13112204 13112386 -72326094 + MIR SINE MIR 2 188 -74 267 315 18 9 chr17 13112969 13113080 -72325400 + MIR SINE MIR 117 228 -34 258 262 60 48 chr17 13113148 13113232 -72325248 + MLT1I LTR MaLR 128 212 -197 284 200 14 14 chr17 13113309 13113379 -72325101 + MLT1I LTR MaLR 340 409 0 395 294 9 0 chr17 13113612 13113721 -72324759 - MIR SINE MIR -2 260 151 1776 105 4 0 chr17 13113806 13114035 -72324445 + AluSq SINE Alu 1 230 -83 511 266 39 98 chr17 13114185 13114490 -72323990 + MLT1I LTR MaLR 116 402 -7 248 263 207 34 chr17 13114811 13115168 -72323312 + L1ME4a LINE L1 3427 3845 -2301 276 276 76 80 chr17 13115461 13115946 -72322534 + L1ME4a LINE L1 4077 4559 -1587 2340 90 0 29 chr17 13116830 13117141 -72321339 + AluY SINE Alu 1 302 -9 511 174 11 11 chr17 13117173 13117265 -72321215 + FRAM SINE Alu 1 92 -84 334 221 0 53 chr17 13117293 13117388 -72321092 + L1ME4a LINE L1 5583 5672 -449 683 253 134 17 chr17 13117422 13117567 -72320913 + L1ME4a LINE L1 5790 5917 -204 279 0 0 0 chr17 13117567 13117598 -72320882 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 683 253 134 17 chr17 13117598 13117744 -72320736 + L1ME4a LINE L1 5917 6115 -6 195 288 41 41 chr17 13119897 13119970 -72318510 - L2 LINE L2 -93 3179 3107 2453 74 0 0 chr17 13120010 13120309 -72318171 - AluSx SINE Alu -13 299 1 346 313 30 0 chr17 13120309 13120408 -72318072 + L2 LINE L2 3192 3293 -20 246 318 45 39 chr17 13120470 13120624 -72317856 - MIR SINE MIR -5 257 103 351 353 74 23 chr17 13121573 13121831 -72316649 - L2 LINE L2 -358 2956 2686 2416 90 0 0 chr17 13124962 13125272 -72313208 + AluSg SINE Alu 1 310 0 226 286 0 0 chr17 13125406 13125476 -72313004 + MIR SINE MIR 70 139 -123 983 182 0 76 chr17 13126046 13126126 -72312354 - MER3 DNA MER1_type 0 209 125 4525 59 30 71 chr17 13126126 13126800 -72311680 + L1PA8 LINE L1 5525 6170 -2 983 182 0 76 chr17 13126800 13126944 -72311536 - MER3 DNA MER1_type -84 125 2 355 273 15 45 chr17 13127492 13127624 -72310856 + MLT1I LTR MaLR 85 212 -197 238 215 200 0 chr17 13127678 13127743 -72310737 + MLT1I LTR MaLR 332 409 0 227 246 31 15 chr17 13128226 13128291 -72310189 + GA-rich Low_complexity Low_complexity 3 68 0 252 295 0 13 chr17 13128322 13128400 -72310080 + MLT1I LTR MaLR 58 134 -275 830 214 96 5 chr17 13128537 13128724 -72309756 - MER3 DNA MER1_type -5 204 1 2209 138 3 34 chr17 13128751 13128842 -72309638 - MER7A DNA MER2_type -2695 343 251 2370 98 0 0 chr17 13128842 13129139 -72309341 + AluSx SINE Alu 1 297 -15 2209 138 3 34 chr17 13129139 13129403 -72309077 - MER7A DNA MER2_type -2787 251 1 477 280 50 20 chr17 13129828 13130028 -72308452 + MLT1H LTR MaLR 57 262 -287 2324 105 0 3 chr17 13130359 13130672 -72307808 - AluSx SINE Alu 0 312 1 301 342 26 33 chr17 13130757 13130976 -72307504 + L1M4 LINE L1 3504 3722 -2424 2165 110 7 7 chr17 13130976 13131277 -72307203 + AluSx SINE Alu 1 301 -11 301 342 26 33 chr17 13131277 13131329 -72307151 + L1M4 LINE L1 3722 3773 -2373 712 312 51 26 chr17 13131499 13131954 -72306526 - L1ME LINE L1 -382 5739 5272 2475 75 0 3 chr17 13131958 13132263 -72306217 + AluY SINE Alu 1 304 -7 2262 114 3 0 chr17 13132381 13132678 -72305802 - AluSq SINE Alu -15 298 1 348 290 140 21 chr17 13133236 13133429 -72305051 - MIR SINE MIR -28 234 19 254 280 42 49 chr17 13133536 13133679 -72304801 + HAL1 LINE L1 968 1109 -1398 1495 113 137 16 chr17 13133903 13134189 -72304291 + AluSg1 SINE Alu 1 316 0 237 324 45 0 chr17 13134466 13134577 -72303903 + HAL1 LINE L1 1577 1692 -815 511 212 37 69 chr17 13134611 13134794 -72303686 + L1ME3A LINE L1 5029 5205 -941 1642 167 9 49 chr17 13134794 13135118 -72303362 + AluJb SINE Alu 1 311 -1 511 212 37 69 chr17 13135118 13135151 -72303329 + L1ME3A LINE L1 5205 5238 -908 1764 123 46 39 chr17 13135212 13135496 -72302984 + AluJb SINE Alu 5 290 -22 601 0 56 0 chr17 13135496 13135585 -72302895 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 372 200 0 0 chr17 13135585 13135665 -72302815 + (TG)n Simple_repeat Simple_repeat 2 81 0 2188 116 0 13 chr17 13135686 13135997 -72302483 + AluSx SINE Alu 1 307 -5 2223 243 27 91 chr17 13135998 13136926 -72301554 + L1ME3A LINE L1 5280 6148 -22 346 307 115 47 chr17 13136961 13137211 -72301269 + L1M4 LINE L1 2850 3082 -3064 2327 111 0 0 chr17 13137211 13137517 -72300963 + AluSp SINE Alu 1 306 -7 346 307 115 47 chr17 13137517 13137709 -72300771 + L1M4 LINE L1 3082 3322 -2824 1790 97 4 0 chr17 13138687 13138915 -72299565 - AluSp SINE Alu -21 292 64 3404 133 28 3 chr17 13139363 13139900 -72298580 - MER34B LTR ERV1 -29 536 2 570 258 240 37 chr17 13139900 13140647 -72297833 + L2 LINE L2 1755 2349 -964 1585 209 70 9 chr17 13140647 13140991 -72297489 - MLT1A1 LTR MaLR 0 365 1 570 258 240 37 chr17 13140991 13141184 -72297296 + L2 LINE L2 2349 2501 -812 2283 187 31 78 chr17 13141184 13141451 -72297029 - MER89 LTR ERV1 0 559 281 360 0 0 0 chr17 13141451 13141491 -72296989 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 2164 114 0 4 chr17 13141497 13141778 -72296702 - AluSx SINE Alu -31 281 2 2283 187 31 78 chr17 13141778 13142065 -72296415 - MER89 LTR ERV1 -283 276 25 2255 104 7 0 chr17 13142065 13142362 -72296118 - AluSp SINE Alu -12 301 3 2283 187 31 78 chr17 13142362 13142386 -72296094 - MER89 LTR ERV1 -534 25 1 570 258 240 37 chr17 13142386 13142527 -72295953 + L2 LINE L2 2501 3068 -245 730 287 78 67 chr17 13142650 13143127 -72295353 + MER34 LTR ERV1 13 494 -48 2297 96 3 22 chr17 13143132 13143445 -72295035 - AluSp SINE Alu -6 307 1 1871 188 76 45 chr17 13143999 13144183 -72294297 + MLT1C LTR MaLR 3 180 -287 2084 115 0 30 chr17 13144183 13144488 -72293992 + AluSg SINE Alu 1 296 -14 1871 188 76 45 chr17 13144488 13144751 -72293729 + MLT1C LTR MaLR 180 464 -3 1713 151 13 55 chr17 13144890 13145202 -72293278 + AluJb SINE Alu 1 299 -13 1932 147 3 3 chr17 13145208 13145494 -72292986 + AluSq SINE Alu 1 286 -27 412 274 110 96 chr17 13145610 13146037 -72292443 + MLT1K LTR MaLR 140 572 -16 23 33 0 0 chr17 13146600 13146630 -72291850 + AT_rich Low_complexity Low_complexity 1 30 0 478 321 42 0 chr17 13146831 13146999 -72291481 + MIR SINE MIR 56 230 -32 1288 200 48 54 chr17 13148471 13148897 -72289583 + MER39 LTR ERV1 1 633 -74 263 229 16 0 chr17 13148993 13149054 -72289426 - LTR16C LTR ERVL -1 490 429 554 303 43 5 chr17 13149097 13149282 -72289198 - LTR16C LTR ERVL -203 288 97 1496 169 103 0 chr17 13149622 13149895 -72288585 + AluJb SINE Alu 1 301 -11 2608 122 59 2 chr17 13150546 13150955 -72287525 + MSTB1 LTR MaLR 1 432 0 240 111 0 0 chr17 13151287 13151323 -72287157 + (CA)n Simple_repeat Simple_repeat 1 36 0 1683 161 23 23 chr17 13152489 13152799 -72285681 - AluJo SINE Alu -2 310 1 183 162 0 0 chr17 13152892 13152929 -72285551 + (CA)n Simple_repeat Simple_repeat 1 37 0 213 304 13 51 chr17 13152993 13153072 -72285408 - MER91A DNA MER1_type -3 193 118 246 380 48 18 chr17 13153084 13153250 -72285230 - MER91A DNA MER1_type -25 171 1 227 258 15 15 chr17 13153643 13153709 -72284771 - L2 LINE L2 -2 3270 3205 286 280 30 20 chr17 13154950 13155050 -72283430 + MIR3 SINE MIR 108 208 0 679 286 16 4 chr17 13155057 13155259 -72283221 + L1ME LINE L1 5567 5770 -351 186 171 24 0 chr17 13155440 13155481 -72282999 + L2 LINE L2 3271 3312 -1 1628 190 28 0 chr17 13155537 13155699 -72282781 - AluJb SINE Alu -19 293 118 258 32 0 0 chr17 13155699 13155730 -72282750 + (TG)n Simple_repeat Simple_repeat 2 32 0 1628 190 28 0 chr17 13155730 13155851 -72282629 - AluJb SINE Alu -194 118 2 2433 88 3 0 chr17 13155929 13156235 -72282245 + AluSg SINE Alu 1 307 -3 755 229 57 57 chr17 13156807 13157051 -72281429 - MIR SINE MIR 0 262 19 813 287 55 10 chr17 13157140 13157429 -72281051 - L1ME3A LINE L1 -57 6113 5812 1359 217 45 0 chr17 13157432 13157722 -72280758 + MER58B DNA MER1_type 36 338 -3 657 252 124 68 chr17 13157722 13157988 -72280492 - L1ME3A LINE L1 -359 5811 5531 649 209 103 143 chr17 13157990 13158240 -72280240 - L1ME3A LINE L1 -1273 4873 4651 1542 164 21 0 chr17 13158240 13158508 -72279972 - AluSx SINE Alu 0 312 40 649 209 103 143 chr17 13158508 13158768 -72279712 - L1ME3A LINE L1 -1495 4651 4382 1436 161 30 79 chr17 13158968 13159272 -72279208 + AluJo SINE Alu 1 289 -23 2469 160 36 2 chr17 13159320 13159732 -72278748 + MSTB LTR MaLR 1 426 0 2477 97 0 0 chr17 13161147 13161457 -72277023 + AluSq SINE Alu 1 310 -3 1677 185 74 35 chr17 13162443 13162837 -72275643 + LTR52 LTR ERVL 10 418 -3 1182 247 10 24 chr17 13162866 13163162 -72275318 - MLT1D LTR MaLR -35 470 179 527 164 10 0 chr17 13163165 13163269 -72275211 + CT-rich Low_complexity Low_complexity 1 105 0 715 258 11 50 chr17 13163279 13163461 -72275019 - MLT1D LTR MaLR -426 200 26 180 77 0 0 chr17 13163481 13163507 -72274973 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 225 0 0 0 chr17 13163625 13163650 -72274830 + (GGGAA)n Simple_repeat Simple_repeat 2 26 0 905 199 29 24 chr17 13163745 13163951 -72274529 - MER6B DNA MER2_type -3 207 1 2431 250 79 42 chr17 13164075 13164160 -72274320 + MER21B LTR ERV1 13 93 -770 2343 97 0 10 chr17 13164160 13164460 -72274020 + AluSx SINE Alu 1 297 -15 2431 250 79 42 chr17 13164460 13165145 -72273335 + MER21B LTR ERV1 93 812 -51 757 134 37 159 chr17 13165203 13165382 -72273098 + LTR28 LTR ERV1 1 139 -286 1346 212 44 36 chr17 13165447 13165965 -72272515 + LTR28 LTR ERV1 416 953 -39 237 311 0 14 chr17 13166012 13166086 -72272394 + LTR28 LTR ERV1 948 1020 0 354 267 0 0 chr17 13166089 13166175 -72272305 + MIR SINE MIR 66 151 -111 228 346 17 15 chr17 13166309 13166424 -72272056 + MIR SINE MIR 61 177 -31 2129 121 3 3 chr17 13166774 13167079 -72271401 + AluSx SINE Alu 1 305 -7 299 327 108 50 chr17 13167411 13167671 -72270809 - L3 LINE CR1 -870 707 433 188 108 0 54 chr17 13169774 13169811 -72268669 + L2 LINE L2 3279 3313 0 311 206 48 0 chr17 13170005 13170068 -72268412 + L1ME4a LINE L1 4088 4153 -1993 505 284 73 14 chr17 13170083 13170301 -72268179 - MIR SINE MIR -30 232 2 1813 165 34 3 chr17 13170514 13170805 -72267675 + AluJb SINE Alu 1 300 -12 1623 164 33 33 chr17 13170948 13171253 -72267227 - AluJo SINE Alu -5 307 3 243 306 106 31 chr17 13171344 13171703 -72266777 + L1ME4a LINE L1 4457 4871 -1275 360 0 0 0 chr17 13171703 13171743 -72266737 + (TA)n Simple_repeat Simple_repeat 1 40 0 243 306 106 31 chr17 13171743 13171922 -72266558 + L1ME4a LINE L1 4871 5035 -1111 2229 116 3 0 chr17 13172137 13172431 -72266049 + AluSx SINE Alu 1 295 -17 801 110 0 0 chr17 13172774 13172883 -72265597 + AluSp/q SINE Alu 183 291 -22 501 266 90 62 chr17 13172900 13172972 -72265508 + L1ME4a LINE L1 5714 5783 -338 2274 110 0 0 chr17 13172972 13173271 -72265209 + AluSc SINE Alu 1 299 -10 501 266 90 62 chr17 13173271 13173400 -72265080 + L1ME4a LINE L1 5783 5907 -214 761 221 67 15 chr17 13173400 13173595 -72264885 + MER3 DNA MER1_type 5 209 0 501 266 90 62 chr17 13173595 13173715 -72264765 + L1ME4a LINE L1 5907 6045 -76 23 0 0 0 chr17 13173739 13173762 -72264718 + AT_rich Low_complexity Low_complexity 1 23 0 2201 103 3 0 chr17 13173762 13174053 -72264427 - AluSg SINE Alu -18 292 1 2385 83 3 0 chr17 13174792 13175094 -72263386 - AluSq SINE Alu -10 303 1 2190 126 93 18 chr17 13175614 13175794 -72262686 + MSTA LTR MaLR 1 166 -262 2111 109 0 3 chr17 13175794 13176077 -72262403 + AluSq SINE Alu 24 305 -8 2190 126 93 18 chr17 13176077 13176294 -72262186 + MSTA LTR MaLR 166 428 0 2122 123 0 0 chr17 13176488 13176764 -72261716 + AluSx SINE Alu 1 276 -36 180 0 0 0 chr17 13176767 13176787 -72261693 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1058 262 27 46 chr17 13177107 13177403 -72261077 - L1ME1 LINE L1 -51 6115 5826 2394 95 0 0 chr17 13177403 13177709 -72260771 - AluSx SINE Alu -6 306 1 1058 262 27 46 chr17 13177709 13177779 -72260701 - L1ME1 LINE L1 -340 5826 5756 856 233 32 60 chr17 13179110 13179275 -72259205 + MIR SINE MIR 13 170 -92 2114 124 7 0 chr17 13179275 13179573 -72258907 + AluSc SINE Alu 1 300 -9 856 233 32 60 chr17 13179573 13179656 -72258824 + MIR SINE MIR 170 254 -8 2355 101 0 19 chr17 13179765 13180081 -72258399 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr17 13180552 13180573 -72257907 + AT_rich Low_complexity Low_complexity 1 21 0 1803 213 17 8 chr17 13180997 13181359 -72257121 - MLT1A1 LTR MaLR 0 365 1 278 363 31 38 chr17 13181749 13181909 -72256571 + MIR3 SINE MIR 38 196 -12 1870 179 3 0 chr17 13181973 13182280 -72256200 - AluJo SINE Alu -3 309 2 2337 72 28 0 chr17 13182461 13182752 -72255728 + AluY SINE Alu 1 299 -12 211 227 0 0 chr17 13182904 13182948 -72255532 + T-rich Low_complexity Low_complexity 6 49 0 2150 110 24 0 chr17 13183634 13183925 -72254555 + AluSq SINE Alu 1 298 -15 337 344 0 16 chr17 13184079 13184204 -72254276 - MIR SINE MIR -95 167 45 1935 153 10 13 chr17 13184448 13184749 -72253731 + AluJo SINE Alu 1 300 -12 698 278 43 16 chr17 13184903 13185158 -72253322 + MIR SINE MIR 1 262 0 233 222 63 0 chr17 13185204 13185267 -72253213 - L2 LINE L2 -74 3239 3173 1033 189 39 0 chr17 13185306 13185486 -72252994 - MER5A DNA MER1_type -1 188 2 463 200 9 9 chr17 13187152 13187262 -72251218 - MER5A DNA MER1_type -77 112 3 2228 116 0 0 chr17 13187941 13188235 -72250245 - AluSg SINE Alu -15 295 2 2329 97 10 3 chr17 13189615 13189925 -72248555 + AluSq SINE Alu 1 312 -1 2443 146 13 87 chr17 13190261 13190721 -72247759 + MSTB LTR MaLR 1 426 0 601 216 42 28 chr17 13191093 13191268 -72247212 - MER21B LTR ERV1 -85 804 621 * 2891 153 46 4 chr17 13191266 13191744 -72246736 + MER41E LTR ERV1 15 512 0 1691 249 71 35 chr17 13191745 13192266 -72246214 - MER21B LTR ERV1 -323 540 1 347 215 8 85 chr17 13192276 13192406 -72246074 - MER112 DNA MER1_type -136 124 5 2348 161 5 22 chr17 13192476 13192881 -72245599 - MER57A LTR ERV1 -4 399 2 660 195 23 8 chr17 13192889 13193017 -72245463 + MLT2E LTR ERVL 452 581 -47 252 254 18 0 chr17 13193162 13193217 -72245263 - L2 LINE L2 -220 3052 2997 341 161 65 0 chr17 13193433 13193495 -72244985 + L1MCc LINE L1 857 922 -5501 674 303 60 23 chr17 13193584 13193950 -72244530 - LTR16A LTR ERVL -9 441 16 1056 331 34 27 chr17 13194230 13194674 -72243806 + MLT1K LTR MaLR 7 453 -135 2559 152 27 0 chr17 13194674 13195082 -72243398 - MSTB1 LTR MaLR -13 419 1 2285 118 0 13 chr17 13195449 13195764 -72242716 + AluSx SINE Alu 1 311 -1 1282 214 78 96 chr17 13195819 13195936 -72242544 - MER34 LTR ERV1 -2 540 422 1926 160 3 31 chr17 13195936 13196254 -72242226 - AluSx SINE Alu -3 309 1 1282 214 78 96 chr17 13196254 13196686 -72241794 - MER34 LTR ERV1 -120 422 1 642 269 17 6 chr17 13196801 13196976 -72241504 + MIR SINE MIR 56 232 -30 1026 201 110 3 chr17 13197186 13197602 -72240878 + MLT1D LTR MaLR 21 505 0 435 294 43 2 chr17 13197640 13197831 -72240649 + L1ME2 LINE L1 5966 6161 -5 295 311 36 36 chr17 13197931 13197974 -72240506 - MIR3 SINE MIR -39 169 127 2093 194 71 20 chr17 13197974 13198412 -72240068 - LOR1b LTR ERV1 0 461 2 295 311 36 36 chr17 13198412 13198535 -72239945 - MIR3 SINE MIR -80 128 3 2327 120 14 3 chr17 13198731 13199082 -72239398 + THE1A LTR MaLR 1 355 0 524 154 0 0 chr17 13200644 13200735 -72237745 + MER5A DNA MER1_type 43 133 -56 2185 106 21 0 chr17 13200738 13201021 -72237459 - AluSg SINE Alu -21 289 1 297 0 0 0 chr17 13201558 13201591 -72236889 + (T)n Simple_repeat Simple_repeat 1 33 0 325 254 111 55 chr17 13201795 13202012 -72236468 + MER102a DNA MER1_type 100 328 -2 323 318 68 0 chr17 13202301 13202389 -72236091 + L2 LINE L2 3138 3231 -41 314 192 19 19 chr17 13202407 13202511 -72235969 + GA-rich Low_complexity Low_complexity 3 106 0 420 220 105 0 chr17 13202518 13202639 -72235841 - MER117 DNA MER1_type -54 143 11 298 286 0 0 chr17 13204279 13204356 -72234124 + MIR SINE MIR 186 262 0 1835 187 29 3 chr17 13204556 13204903 -72233577 + MLT2D LTR ERVL 1 356 -58 2072 103 0 77 chr17 13204927 13205238 -72233242 + AluSx SINE Alu 1 287 -25 23 0 0 0 chr17 13205251 13205274 -72233206 + AT_rich Low_complexity Low_complexity 1 23 0 280 135 27 0 chr17 13205280 13205354 -72233126 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 238 311 14 0 chr17 13205580 13205654 -72232826 + MER117 DNA MER1_type 2 76 -121 2022 141 0 0 chr17 13205699 13206009 -72232471 + AluSx SINE Alu 1 310 0 1331 304 80 31 chr17 13206130 13206929 -72231551 + L2 LINE L2 1949 2786 -528 331 205 25 16 chr17 13207060 13207182 -72231298 + GA-rich Low_complexity Low_complexity 1 123 0 2053 135 0 0 chr17 13207183 13207643 -72230837 + AluSx SINE Alu 1 460 0 471 256 12 17 chr17 13207644 13208049 -72230431 + GA-rich Low_complexity Low_complexity 1 403 0 196 294 0 0 chr17 13208097 13208148 -72230332 - MIR SINE MIR -134 128 78 887 149 7 7 chr17 13208396 13208702 -72229778 + (CA)n Simple_repeat Simple_repeat 1 306 0 440 329 67 33 chr17 13209258 13209498 -72228982 + MIR SINE MIR 11 258 -4 186 387 51 15 chr17 13209511 13209648 -72228832 + L2 LINE L2 2913 3054 -218 1832 59 18 0 chr17 13209652 13209872 -72228608 - AluSg/x SINE Alu -6 304 81 1758 167 17 47 chr17 13209872 13210231 -72228249 + MLT1B LTR MaLR 27 374 -16 2138 174 34 15 chr17 13210435 13210725 -72227755 - Tigger3(Golem) DNA MER2_type 0 3028 2725 2209 102 0 7 chr17 13210725 13211142 -72227338 + AluSp SINE Alu 3 417 0 2138 174 34 15 chr17 13211142 13211257 -72227223 - Tigger3(Golem) DNA MER2_type -303 2725 2614 2376 94 0 0 chr17 13211257 13211554 -72226926 - AluSx SINE Alu -15 297 1 387 214 0 41 chr17 13212244 13212342 -72226138 + MLT1H LTR MaLR 58 151 -398 389 245 59 0 chr17 13212965 13213067 -72225413 - L2 LINE L2 -16 3297 3190 1747 135 0 97 chr17 13213434 13213682 -72224798 - AluJo SINE Alu -2 310 102 2327 107 0 0 chr17 13213682 13213981 -72224499 - AluSx SINE Alu -13 299 1 1747 135 0 97 chr17 13213981 13214073 -72224407 - AluJo SINE Alu -210 102 3 338 281 135 60 chr17 13214764 13214949 -72223531 - MIR SINE MIR -8 254 56 914 130 7 0 chr17 13215003 13215166 -72223314 - AluSg/x SINE Alu 0 306 143 21 36 0 0 chr17 13216441 13216469 -72222011 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 13216911 13216933 -72221547 + (T)n Simple_repeat Simple_repeat 1 22 0 1507 153 33 12 chr17 13216935 13217176 -72221304 - AluJo SINE Alu -66 246 1 240 227 227 0 chr17 13217564 13217639 -72220841 - MER96 DNA MER1_type? -81 94 3 487 228 67 83 chr17 13218061 13218254 -72220226 + MIR SINE MIR 73 262 0 454 292 197 28 chr17 13218371 13219057 -72219423 + L2 LINE L2 2503 3311 -2 2092 97 4 4 chr17 13219365 13219633 -72218847 - AluSc SINE Alu -7 302 35 2284 106 7 0 chr17 13223210 13223502 -72214978 + AluSg SINE Alu 1 294 -16 2257 110 7 7 chr17 13223670 13223970 -72214510 - AluSx SINE Alu -12 300 1 30 59 0 0 chr17 13224573 13224624 -72213856 + AT_rich Low_complexity Low_complexity 1 51 0 2408 84 0 7 chr17 13225151 13225449 -72213031 - AluSc SINE Alu -13 296 1 2170 135 3 0 chr17 13225449 13225760 -72212720 - AluSx SINE Alu 0 312 1 2091 121 0 0 chr17 13225771 13226079 -72212401 - AluSx SINE Alu 0 312 5 2263 87 37 3 chr17 13226541 13226839 -72211641 - AluY SINE Alu -3 308 1 2415 86 7 0 chr17 13227286 13227590 -72210890 - AluSp SINE Alu -7 306 1 257 268 0 37 chr17 13229573 13229655 -72208825 + L1ME4a LINE L1 5966 6044 -77 526 269 133 45 chr17 13229669 13229978 -72208502 - LTR16B LTR ERVL -9 455 120 677 230 23 17 chr17 13231442 13231616 -72206864 - MER58A DNA MER1_type -3 221 47 276 207 52 0 chr17 13231749 13231807 -72206673 - L1ME4a LINE L1 -82 6039 5979 387 305 70 5 chr17 13231907 13232107 -72206373 - L1ME4a LINE L1 -374 5747 5535 2260 65 18 4 chr17 13232136 13232465 -72206015 - AluSq SINE Alu 0 333 1 355 273 112 19 chr17 13232700 13232861 -72205619 + MER5B DNA MER1_type 1 176 -2 186 323 16 0 chr17 13232880 13232942 -72205538 + MER5A DNA MER1_type 38 100 -89 558 239 103 22 chr17 13233011 13233195 -72205285 + MER20 DNA MER1_type 4 202 -17 195 244 35 81 chr17 13233696 13233722 -72204758 + MER5B DNA MER1_type 38 64 -114 2447 65 3 0 chr17 13233722 13234013 -72204467 + AluY SINE Alu 1 292 -19 195 244 35 81 chr17 13234013 13234072 -72204408 + MER5B DNA MER1_type 64 119 -59 243 231 0 62 chr17 13234225 13234290 -72204190 + MIR SINE MIR 22 82 -180 2080 191 43 5 chr17 13234658 13235098 -72203382 - MSTB2 LTR MaLR 0 457 1 368 314 66 0 chr17 13235534 13235671 -72202809 - MIR SINE MIR -65 197 52 182 230 40 70 chr17 13235945 13236045 -72202435 - L2 LINE L2 -111 3202 3106 231 333 80 22 chr17 13236362 13236500 -72201980 + MER5B DNA MER1_type 1 146 -32 248 0 0 30 chr17 13241526 13241559 -72196921 + (CAAT)n Simple_repeat Simple_repeat 3 34 0 287 24 0 24 chr17 13241791 13241832 -72196648 + (TAAG)n Simple_repeat Simple_repeat 2 41 0 2303 85 0 67 chr17 13244553 13244882 -72193598 - AluSq SINE Alu -6 307 1 300 244 143 25 chr17 13245297 13245416 -72193064 + MIR SINE MIR 19 151 -111 1247 87 50 3 chr17 13246976 13247197 -72191283 - AluSc SINE Alu -1 308 2 200 111 28 0 chr17 13247767 13247803 -72190677 + (TG)n Simple_repeat Simple_repeat 2 38 0 2500 78 3 0 chr17 13249848 13250156 -72188324 - AluSp SINE Alu -4 309 1 2544 76 0 0 chr17 13250392 13250695 -72187785 - AluY SINE Alu -8 303 1 226 351 149 12 chr17 13250859 13251027 -72187453 + MIR SINE MIR 20 210 -52 24 0 0 0 chr17 13251345 13251369 -72187111 + AT_rich Low_complexity Low_complexity 1 24 0 2047 130 7 3 chr17 13251658 13251950 -72186530 - AluSq SINE Alu -20 293 1 2476 88 0 0 chr17 13251981 13252278 -72186202 + AluSq SINE Alu 1 297 -16 2317 97 10 0 chr17 13254691 13255000 -72183480 + AluSx SINE Alu 1 312 0 537 105 12 0 chr17 13255622 13255708 -72182772 - Alu SINE Alu -3 307 221 2357 237 53 33 chr17 13256051 13256365 -72182115 - L1ME2 LINE L1 -108 6056 5750 1795 147 136 16 chr17 13256365 13256806 -72181674 + LTR54B LTR ERV1 1 494 -4 2357 237 53 33 chr17 13256806 13257296 -72181184 - L1ME2 LINE L1 -414 5750 5236 2321 99 0 3 chr17 13257308 13257611 -72180869 - AluSg SINE Alu -8 302 1 677 315 134 39 chr17 13258713 13259094 -72179386 + L1M4 LINE L1 2353 2696 -3450 2406 57 7 3 chr17 13259094 13259394 -72179086 - AluY SINE Alu -10 301 1 677 315 134 39 chr17 13259394 13259746 -72178734 + L1M4 LINE L1 2696 3013 -3133 1753 205 0 0 chr17 13259746 13260058 -72178422 + AluJo SINE Alu 1 312 0 677 315 134 39 chr17 13260058 13260355 -72178125 + L1M4 LINE L1 3013 3482 -2664 328 198 87 0 chr17 13260634 13260760 -72177720 + L1MC/D LINE L1 5295 5431 -2377 31 58 0 0 chr17 13260850 13260902 -72177578 + AT_rich Low_complexity Low_complexity 1 52 0 2347 71 3 0 chr17 13260973 13261279 -72177201 - AluSp SINE Alu 0 307 1 754 313 111 48 chr17 13261388 13262117 -72176363 - L2 LINE L2 -2 3311 2522 23 0 0 0 chr17 13262139 13262162 -72176318 + AT_rich Low_complexity Low_complexity 1 23 0 3223 150 16 3 chr17 13262164 13262729 -72175751 - L1MA6 LINE L1 0 6300 5729 2039 159 42 16 chr17 13262730 13263108 -72175372 - MER61D LTR ERV1 0 501 114 4508 32 0 0 chr17 13263160 13263904 -72174576 - L1PA4 LINE L1 -342 5813 5070 2924 45 0 0 chr17 13263904 13264253 -72174227 + L1PA4 LINE L1 5802 6155 0 10996 116 14 12 chr17 13264254 13266332 -72172148 - MER61D-int LTR ERV1 -11 5206 3055 2756 160 63 49 chr17 13266316 13267935 -72170545 - MER61D-int LTR ERV1 -2791 2426 511 * 2328 149 63 0 chr17 13268031 13268267 -72170213 - L1MA6 LINE L1 -566 5734 5514 272 27 27 0 chr17 13268267 13268304 -72170176 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2328 149 63 0 chr17 13268304 13268564 -72169916 - L1MA6 LINE L1 -786 5514 5196 343 299 33 33 chr17 13268580 13268791 -72169689 - L1MC4a LINE L1 -1885 5923 5713 385 285 47 101 chr17 13268975 13269099 -72169381 + L1M4 LINE L1 3918 4047 -2099 2243 98 7 0 chr17 13269099 13269278 -72169202 - AluY SINE Alu -3 308 125 279 0 0 0 chr17 13269278 13269309 -72169171 + (TG)n Simple_repeat Simple_repeat 2 32 0 2243 98 7 0 chr17 13269309 13269435 -72169045 - AluY SINE Alu -186 125 1 385 285 47 101 chr17 13269435 13269587 -72168893 + L1M4 LINE L1 4047 4179 -1967 29 28 0 0 chr17 13269709 13269745 -72168735 + AT_rich Low_complexity Low_complexity 1 36 0 1855 162 11 0 chr17 13270044 13270361 -72168119 - AluSx SINE Alu 0 322 3 22 0 0 0 chr17 13270403 13270425 -72168055 + AT_rich Low_complexity Low_complexity 1 22 0 338 311 114 8 chr17 13270430 13270562 -72167918 - L1M4b LINE L1 -5916 943 798 539 185 0 0 chr17 13270579 13270671 -72167809 - FLAM SINE Alu -13 130 39 3224 196 25 56 chr17 13270722 13270759 -72167721 + L1MB7 LINE L1 5314 5351 -833 216 0 0 0 chr17 13270759 13270783 -72167697 + (ATATG)n Simple_repeat Simple_repeat 2 25 0 3224 196 25 56 chr17 13270783 13271632 -72166848 + L1MB7 LINE L1 5351 6172 -12 2237 198 120 112 chr17 13271652 13272073 -72166407 + L1MD3 LINE L1 6675 7091 -904 261 266 0 43 chr17 13272073 13272167 -72166313 + MLT1F1 LTR MaLR 35 124 -443 2237 198 120 112 chr17 13272167 13272746 -72165734 + L1MD3 LINE L1 7091 7989 -6 412 294 67 53 chr17 13272823 13273201 -72165279 + L1MC4a LINE L1 3595 3966 -2180 180 0 0 0 chr17 13273201 13273221 -72165259 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 3877 97 21 0 chr17 13273221 13273789 -72164691 - L1MA2 LINE L1 -10 6294 5715 412 294 67 53 chr17 13273789 13273899 -72164581 + L1MC4a LINE L1 3965 4091 -2055 324 270 31 55 chr17 13273921 13273982 -72164498 + L1MC4a LINE L1 5733 5794 -2014 2143 191 109 27 chr17 13273982 13274506 -72163974 - MLT1F1 LTR MaLR 0 567 1 324 270 31 55 chr17 13274506 13274607 -72163873 + L1MC4a LINE L1 5794 5891 -1917 1862 108 194 19 chr17 13274865 13275225 -72163255 + MSTA LTR MaLR 5 427 -1 236 263 12 25 chr17 13275901 13275981 -72162499 - MLT1J2 LTR MaLR -314 136 58 1127 229 123 54 chr17 13276349 13276811 -72161669 + MLT1D LTR MaLR 3 496 -9 650 277 62 32 chr17 13277523 13277765 -72160715 + MIR SINE MIR 10 256 -6 363 302 79 16 chr17 13278338 13278527 -72159953 - L2 LINE L2 -39 3274 3074 472 275 0 14 chr17 13279433 13279575 -72158905 - MER117 DNA MER1_type -51 146 7 1172 199 146 12 chr17 13279802 13280124 -72158356 + MLT1A1 LTR MaLR 1 365 0 1586 149 15 79 chr17 13280211 13280540 -72157940 - AluJo SINE Alu -3 309 2 343 284 60 49 chr17 13280570 13280753 -72157727 + MIR3 SINE MIR 17 201 -7 1919 9 5 14 chr17 13281872 13282093 -72156387 + AluYa5 SINE Alu 93 311 0 1581 218 88 38 chr17 13282263 13282740 -72155740 + MLT1D LTR MaLR 5 505 0 2781 245 81 92 chr17 13282770 13284617 -72153863 + Charlie2b DNA MER1_type 2 1828 -954 3812 173 82 47 chr17 13284826 13285610 -72152870 + L1MC1 LINE L1 20 844 -5582 202 0 91 0 chr17 13285610 13285643 -72152837 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3812 173 82 47 chr17 13285643 13285803 -72152677 + L1MC1 LINE L1 844 997 -5429 5351 191 37 14 chr17 13285877 13287181 -72151299 + L1MC1 LINE L1 4700 6070 -543 2174 95 0 3 chr17 13287181 13287516 -72150964 + AluSg SINE Alu 1 334 0 5351 191 37 14 chr17 13287516 13288073 -72150407 + L1MC1 LINE L1 6070 6613 0 2435 243 89 21 chr17 13288110 13289107 -72149373 - L1M4 LINE L1 -1622 4524 3451 1882 168 3 7 chr17 13289107 13289410 -72149070 - AluJo SINE Alu -8 304 3 2435 243 89 21 chr17 13289410 13289462 -72149018 - L1M4 LINE L1 -2695 3451 3404 362 378 27 11 chr17 13289718 13289906 -72148574 + L2 LINE L2 1037 1227 -2087 1110 100 0 0 chr17 13289976 13290164 -72148316 + AluSp SINE Alu 134 321 0 384 355 63 37 chr17 13290172 13290555 -72147925 + L2 LINE L2 1297 1689 -1625 764 150 0 0 chr17 13290948 13291081 -72147399 + L1MA5 LINE L1 6166 6298 -2 303 286 104 54 chr17 13291412 13291692 -72146788 + L1 LINE L1 3006 3299 -2847 316 274 14 68 chr17 13291952 13292098 -72146382 + L1 LINE L1 3647 3784 -2362 977 204 56 0 chr17 13292263 13292459 -72146021 + Tigger7 DNA MER2_type 3 209 -2278 1506 119 211 54 chr17 13292461 13292831 -72145649 - MSTA LTR MaLR 0 428 1 837 168 63 0 chr17 13292837 13293027 -72145453 + Tigger7 DNA MER2_type 2322 2523 -64 306 272 76 0 chr17 13293027 13293119 -72145361 + Tigger7 DNA MER2_type 2383 2481 -6 23 33 0 0 chr17 13293196 13293226 -72145254 + AT_rich Low_complexity Low_complexity 1 30 0 1998 92 4 11 chr17 13293266 13293539 -72144941 - AluSx SINE Alu -5 307 37 1267 256 20 10 chr17 13293586 13293883 -72144597 + AluJo SINE Alu 1 300 -12 218 328 0 0 chr17 13293955 13294019 -72144461 + (TATG)n Simple_repeat Simple_repeat 4 67 0 399 335 53 29 chr17 13294050 13294259 -72144221 + MIR SINE MIR 36 249 -13 26 30 0 0 chr17 13294440 13294473 -72144007 + AT_rich Low_complexity Low_complexity 1 33 0 484 341 105 11 chr17 13294532 13294884 -72143596 + L1ME4a LINE L1 5560 5944 -177 272 231 48 39 chr17 13296181 13296285 -72142195 + MER103 DNA DNA 2 106 -60 215 185 0 19 chr17 13296889 13296943 -72141537 + GA-rich Low_complexity Low_complexity 4 56 0 2648 99 16 11 chr17 13298360 13298733 -72139747 - THE1C LTR MaLR 0 375 1 9401 125 62 9 chr17 13298733 13300231 -72138249 - THE1C-int LTR MaLR 0 1580 3 2613 98 16 19 chr17 13300233 13300609 -72137871 - THE1C LTR MaLR 0 375 1 347 266 29 54 chr17 13301189 13301328 -72137152 + MIR SINE MIR 16 149 -59 23 0 0 0 chr17 13301422 13301445 -72137035 + AT_rich Low_complexity Low_complexity 1 23 0 235 275 142 40 chr17 13301533 13301692 -72136788 - MER5A DNA MER1_type 0 189 3 332 122 47 19 chr17 13303160 13303267 -72135213 + (CA)n Simple_repeat Simple_repeat 2 111 0 198 0 0 0 chr17 13303327 13303349 -72135131 + (CA)n Simple_repeat Simple_repeat 2 23 0 330 239 40 23 chr17 13303397 13303573 -72134907 + (CA)n Simple_repeat Simple_repeat 2 180 0 464 227 7 97 chr17 13304162 13304316 -72134164 + MIR SINE MIR 72 211 -51 299 360 47 7 chr17 13304374 13304524 -72133956 + L3 LINE CR1 1210 1365 -212 201 320 0 0 chr17 13304544 13304594 -72133886 - L2 LINE L2 -13 3259 3210 266 354 58 35 chr17 13304634 13304974 -72133506 - L2 LINE L2 -236 3036 2694 468 311 171 4 chr17 13305948 13306199 -72132281 - MLT1L LTR MaLR -8 607 315 619 175 9 35 chr17 13306381 13306495 -72131985 - MER81 DNA DNA -1 113 3 812 214 287 62 chr17 13306719 13307120 -72131360 - MLT1E2 LTR MaLR -51 603 52 220 154 39 0 chr17 13307180 13307232 -72131248 + (TG)n Simple_repeat Simple_repeat 2 55 0 2196 115 0 0 chr17 13307258 13307546 -72130934 - AluSg1 SINE Alu -21 288 1 6528 100 12 0 chr17 13307553 13308649 -72129831 - L1PA14 LINE L1 0 6161 5070 450 351 96 0 chr17 13308690 13308878 -72129602 + L3 LINE CR1 1370 1575 -2 278 294 20 20 chr17 13310004 13310106 -72128374 - MIR SINE MIR -146 116 15 553 303 56 54 chr17 13310215 13310428 -72128052 - L3 LINE CR1 -11 1566 1350 2193 110 0 3 chr17 13310428 13310728 -72127752 - AluSg SINE Alu -7 303 5 553 303 56 54 chr17 13310728 13310904 -72127576 - L3 LINE CR1 -227 1350 1176 1612 128 21 21 chr17 13311033 13311275 -72127205 - AluSx SINE Alu -70 242 1 3862 214 42 74 chr17 13311275 13312530 -72125950 + L1MC4a LINE L1 6554 7707 -101 2039 131 10 0 chr17 13312640 13312931 -72125549 + AluSx SINE Alu 1 294 -18 207 100 0 0 chr17 13312956 13312986 -72125494 + (T)n Simple_repeat Simple_repeat 1 30 0 2460 77 3 0 chr17 13313004 13313304 -72125176 - AluSp SINE Alu -12 301 1 25 51 0 0 chr17 13313314 13313353 -72125127 + AT_rich Low_complexity Low_complexity 1 39 0 33 56 0 0 chr17 13313694 13313748 -72124732 + AT_rich Low_complexity Low_complexity 1 54 0 28 29 0 0 chr17 13313940 13313975 -72124505 + AT_rich Low_complexity Low_complexity 1 35 0 2226 118 0 0 chr17 13313986 13314282 -72124198 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 13315159 13315180 -72123300 + AT_rich Low_complexity Low_complexity 1 21 0 2481 53 3 3 chr17 13315181 13315483 -72122997 + AluY SINE Alu 1 302 -9 180 0 0 0 chr17 13316324 13316344 -72122136 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 258 32 0 0 chr17 13316343 13316374 -72122106 + (CA)n Simple_repeat Simple_repeat 1 31 0 247 200 20 0 chr17 13316445 13316495 -72121985 + CT-rich Low_complexity Low_complexity 2 52 0 22 0 0 0 chr17 13316586 13316608 -72121872 + AT_rich Low_complexity Low_complexity 1 22 0 2009 132 4 0 chr17 13316657 13316966 -72121514 - AluSx SINE Alu 0 310 1 238 282 87 26 chr17 13316966 13317128 -72121352 - L1ME LINE L1 -297 5873 5705 538 271 8 0 chr17 13317218 13317347 -72121133 - MER58B DNA MER1_type -31 310 181 1563 208 10 7 chr17 13318282 13318590 -72119890 + AluJo SINE Alu 2 310 -2 696 56 0 0 chr17 13318610 13318699 -72119781 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 374 304 47 14 chr17 13318750 13318837 -72119643 + MIR SINE MIR 66 161 -101 2316 97 7 0 chr17 13318837 13319137 -72119343 + AluSp SINE Alu 1 302 -11 374 304 47 14 chr17 13319137 13319197 -72119283 + MIR SINE MIR 161 218 -44 203 355 190 8 chr17 13319344 13319465 -72119015 + L2 LINE L2 3128 3270 -2 345 278 142 6 chr17 13319520 13319689 -72118791 + HAL1 LINE L1 1606 1797 -710 698 109 9 0 chr17 13319689 13319799 -72118681 + (GAAA)n Simple_repeat Simple_repeat 4 114 0 24 32 0 0 chr17 13320212 13320243 -72118237 + AT_rich Low_complexity Low_complexity 1 31 0 1674 172 0 34 chr17 13320452 13320749 -72117731 + AluJo SINE Alu 5 291 -21 25 31 0 0 chr17 13320887 13320919 -72117561 + AT_rich Low_complexity Low_complexity 1 32 0 1774 131 73 7 chr17 13321136 13321410 -72117070 + AluSx SINE Alu 3 294 -18 2295 104 0 0 chr17 13321797 13322106 -72116374 - AluSc SINE Alu 0 309 1 2573 58 0 3 chr17 13322509 13322818 -72115662 - AluY SINE Alu -3 308 1 376 297 65 19 chr17 13322819 13322974 -72115506 + L3 LINE CR1 1192 1353 -224 279 270 27 0 chr17 13325482 13325556 -72112924 - MIR SINE MIR -94 168 93 872 259 78 53 chr17 13325643 13326077 -72112403 + MER39 LTR ERV1 69 706 -1 1810 142 3 86 chr17 13326202 13326539 -72111941 + AluSx SINE Alu 1 309 -3 2214 88 21 0 chr17 13326821 13327104 -72111376 + AluSc SINE Alu 1 289 -20 398 174 128 0 chr17 13327164 13327248 -72111232 - MER34 LTR ERV1 -3 539 445 577 169 92 39 chr17 13327248 13327378 -72111102 + Tigger1 DNA MER2_type 1 137 -2281 * 1267 143 14 5 chr17 13327376 13327592 -72110888 + Tigger1 DNA MER2_type 2200 2417 -1 1499 211 145 8 chr17 13327594 13327703 -72110777 - MER34 LTR ERV1 -95 447 354 3843 53 0 7 chr17 13327703 13328158 -72110322 + L1PA5 LINE L1 5703 6154 0 1499 211 145 8 chr17 13328158 13328441 -72110039 - MER34 LTR ERV1 -188 354 1 1946 112 95 0 chr17 13328463 13328748 -72109732 + AluSx SINE Alu 1 312 0 3971 159 28 14 chr17 13328919 13329638 -72108842 + L1MA7 LINE L1 5558 6286 -5 1436 219 0 32 chr17 13329639 13329950 -72108530 + AluJo SINE Alu 1 301 -11 2027 111 7 14 chr17 13329963 13330252 -72108228 - AluSc SINE Alu -22 287 1 2122 125 0 14 chr17 13330955 13331250 -72107230 - AluSx SINE Alu -21 291 1 1801 161 27 3 chr17 13331501 13331800 -72106680 - AluJo SINE Alu -1 311 6 2132 134 0 10 chr17 13332680 13332987 -72105493 + AluSx SINE Alu 1 304 -8 2150 116 3 0 chr17 13333754 13334048 -72104432 + AluSq SINE Alu 1 295 -18 1325 186 25 41 chr17 13334132 13334449 -72104031 + L1MB4 LINE L1 5671 5982 -202 1043 250 87 40 chr17 13334454 13334959 -72103521 + MER39 LTR ERV1 4 565 0 697 179 150 0 chr17 13334961 13335134 -72103346 + L1MB4 LINE L1 5982 6180 0 377 328 58 11 chr17 13335335 13335509 -72102971 + MIR SINE MIR 36 217 -45 1692 144 24 10 chr17 13335578 13335875 -72102605 + MER89 LTR ERV1 1 301 -258 380 209 55 86 chr17 13335875 13336038 -72102442 - MER34C LTR ERV1 0 585 428 1909 151 37 37 chr17 13336143 13336520 -72101960 - MER66B LTR ERV1 -1 485 109 226 245 0 0 chr17 13336517 13336566 -72101914 - MER89 LTR ERV1 -214 345 297 * 835 184 162 43 chr17 13336565 13336843 -72101637 + MER34C LTR ERV1 37 347 -238 943 247 134 59 chr17 13336854 13336870 -72101610 + MER34 LTR ERV1 9 22 -520 2625 137 46 19 chr17 13336870 13337287 -72101193 - MSTA LTR MaLR 0 428 1 943 247 134 59 chr17 13337287 13337748 -72100732 + MER34 LTR ERV1 22 522 -20 440 195 13 0 chr17 13337754 13337831 -72100649 + MER66B LTR ERV1 27 104 -382 445 153 0 0 chr17 13337838 13337910 -72100570 + MER89 LTR ERV1 476 547 -12 21 57 0 0 chr17 13338569 13338604 -72099876 + AT_rich Low_complexity Low_complexity 1 35 0 1660 139 4 54 chr17 13339357 13339571 -72098909 + MER57A LTR ERV1 1 200 -203 1861 143 21 0 chr17 13339571 13339880 -72098600 - AluJb SINE Alu 0 315 1 1660 139 4 54 chr17 13339880 13339944 -72098536 + MER57A LTR ERV1 200 266 -137 2092 94 59 3 chr17 13340289 13340576 -72097904 + AluSg1 SINE Alu 1 303 -6 3065 131 6 17 chr17 13340590 13341033 -72097447 + MER31A LTR ERV1 1 440 -45 2186 122 35 67 chr17 13341033 13341409 -72097071 + THE1B LTR MaLR 1 364 0 3065 131 6 17 chr17 13341409 13341447 -72097033 + MER31A LTR ERV1 440 477 -8 482 278 99 40 chr17 13341465 13341688 -72096792 + MIR SINE MIR 17 252 -10 262 244 73 12 chr17 13341693 13341775 -72096705 - MIR3 SINE MIR -1 207 121 21 95 0 0 chr17 13343379 13343442 -72095038 + AT_rich Low_complexity Low_complexity 1 63 0 2783 153 16 23 chr17 13343909 13344346 -72094134 - Tigger2a DNA MER2_type 0 434 1 458 294 91 38 chr17 13344687 13345027 -72093453 + L1M4 LINE L1 3071 3428 -2718 2480 85 0 0 chr17 13345295 13345600 -72092880 + AluSg SINE Alu 1 305 -5 26 74 0 0 chr17 13345760 13345814 -72092666 + AT_rich Low_complexity Low_complexity 1 54 0 347 188 12 0 chr17 13346250 13346330 -72092150 - L2 LINE L2 -1618 1696 1616 663 279 140 52 chr17 13346333 13346946 -72091534 - L2 LINE L2 -1117 2197 1531 204 376 66 33 chr17 13348190 13348461 -72090019 + L2 LINE L2 2219 2498 -816 2474 91 0 0 chr17 13348504 13348811 -72089669 + AluSq SINE Alu 1 307 -6 1287 324 94 26 chr17 13349461 13350550 -72087930 - L2 LINE L2 -4 3309 2149 1583 240 67 74 chr17 13350822 13351041 -72087439 + MER77 LTR ERV1 53 272 -333 3496 108 2 0 chr17 13351041 13351493 -72086987 - MLT2A2 LTR ERVL 0 453 1 1583 240 67 74 chr17 13351493 13351824 -72086656 + MER77 LTR ERV1 272 599 -6 2270 154 46 14 chr17 13351827 13352177 -72086303 + THE1B LTR MaLR 3 363 -1 1776 144 9 72 chr17 13352848 13353194 -72085286 + MER33 DNA MER1_type 1 324 0 1601 156 23 0 chr17 13355663 13355920 -72082560 - L1PA16 LINE L1 0 6166 5904 4416 147 20 0 chr17 13355671 13356378 -72082102 - L1PA16 LINE L1 -6 6160 5440 1253 191 70 0 chr17 13356378 13356650 -72081830 + L1 LINE L1 4644 4934 -1212 * 1676 182 33 14 chr17 13356637 13357000 -72081480 + L1 LINE L1 3963 4332 -1814 367 253 80 60 chr17 13357669 13357819 -72080661 + MIR3 SINE MIR 41 193 -15 2269 181 50 83 chr17 13357936 13358786 -72079694 - MER21A LTR ERV1 0 931 1 242 217 14 0 chr17 13358922 13358991 -72079489 + CT-rich Low_complexity Low_complexity 27 96 0 571 199 18 18 chr17 13359014 13359185 -72079295 + CT-rich Low_complexity Low_complexity 1 171 0 215 121 0 0 chr17 13359185 13359218 -72079262 + (TTCC)n Simple_repeat Simple_repeat 2 34 0 670 179 7 7 chr17 13359218 13359363 -72079117 + CT-rich Low_complexity Low_complexity 2 146 0 276 30 0 0 chr17 13359578 13359611 -72078869 + (TG)n Simple_repeat Simple_repeat 1 33 0 357 109 0 0 chr17 13359732 13359787 -72078693 - MLT1F LTR MaLR 0 542 488 * 414 280 0 20 chr17 13359786 13359886 -72078594 - MLT1E LTR MaLR -485 108 11 698 239 81 113 chr17 13359899 13360234 -72078246 - MSTD-int LTR MaLR -7 1364 1041 775 287 42 7 chr17 13360501 13360790 -72077690 - MSTD-int LTR MaLR -765 606 308 1481 150 0 0 chr17 13360794 13361021 -72077459 - AluSg/x SINE Alu 0 310 84 287 322 171 20 chr17 13362109 13362401 -72076079 - L2 LINE L2 -5 3308 2973 203 303 49 49 chr17 13362448 13362590 -72075890 - L2 LINE L2 -419 2895 2754 1302 177 49 115 chr17 13362636 13362878 -72075602 - MER69 DNA AcHobo 0 2526 2270 2109 111 7 0 chr17 13362878 13363167 -72075313 + AluSq SINE Alu 2 292 -21 1302 177 49 115 chr17 13363167 13363335 -72075145 - MER69 DNA AcHobo -256 2270 2162 1702 173 4 4 chr17 13363335 13363612 -72074868 - AluJo SINE Alu -23 289 13 1302 177 49 115 chr17 13363612 13363776 -72074704 - MER69 DNA AcHobo -364 2162 1989 359 341 29 0 chr17 13363766 13363904 -72074576 - MER69 DNA AcHobo -2379 147 6 * 606 299 68 101 chr17 13364675 13365519 -72072961 - L1MEd LINE L1 -5228 891 76 4826 129 29 26 chr17 13365728 13365838 -72072642 - L1PA15 LINE L1 0 6165 6057 2982 93 12 12 chr17 13365838 13366269 -72072211 - MER57B LTR ERV1 -3 431 1 4826 129 29 26 chr17 13366269 13366973 -72071507 - L1PA15 LINE L1 -108 6057 5348 264 299 126 9 chr17 13367015 13367246 -72071234 - HAL1 LINE L1 -678 1829 1572 3370 201 125 153 chr17 13367258 13368915 -72069565 + L1MC3 LINE L1 4 1770 -4794 25 31 0 0 chr17 13368922 13368954 -72069526 + AT_rich Low_complexity Low_complexity 1 32 0 9248 159 6 9 chr17 13368958 13370825 -72067655 - L1PA13 LINE L1 -630 5531 3667 4265 87 52 5 chr17 13370825 13371443 -72067037 + L1PA13 LINE L1 5512 6160 -3 1903 274 60 18 chr17 13371451 13372742 -72065738 + L1MC3 LINE L1 1989 3284 -3280 809 218 27 32 chr17 13372746 13372934 -72065546 - MSTD LTR MaLR 0 396 210 348 24 0 0 chr17 13372983 13373024 -72065456 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1645 266 13 11 chr17 13373024 13373566 -72064914 + L1MC3 LINE L1 3598 4140 -2424 2227 211 55 0 chr17 13373602 13374061 -72064419 + MLT1D LTR MaLR 22 505 0 9332 210 96 28 chr17 13374061 13375336 -72063144 + L1MC3 LINE L1 4137 5324 -2879 303 28 0 0 chr17 13375336 13375372 -72063108 + (TA)n Simple_repeat Simple_repeat 2 37 0 9332 210 96 28 chr17 13375372 13377906 -72060574 + L1MC3 LINE L1 5324 8203 0 518 281 71 129 chr17 13377907 13378229 -72060251 - HAL1 LINE L1 -939 1568 1229 963 123 6 17 chr17 13378229 13378408 -72060072 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 1650 188 33 7 chr17 13378416 13378720 -72059760 - AluSx SINE Alu 0 312 1 518 281 71 129 chr17 13378720 13378737 -72059743 - HAL1 LINE L1 -1285 1222 1206 387 0 0 0 chr17 13378737 13378780 -72059700 + (TG)n Simple_repeat Simple_repeat 2 44 0 1490 63 0 0 chr17 13378788 13378977 -72059503 - L1PA5 LINE L1 0 6154 5966 518 281 71 129 chr17 13378977 13379207 -72059273 - HAL1 LINE L1 -1308 1199 1045 2698 132 27 2 chr17 13379207 13379648 -72058832 - L1PA13 LINE L1 0 6163 5712 518 281 71 129 chr17 13379648 13379943 -72058537 - HAL1 LINE L1 -1462 1045 735 2381 90 6 0 chr17 13380286 13380597 -72057883 + AluSp SINE Alu 1 313 0 1174 142 78 5 chr17 13380614 13380833 -72057647 + L1PA13 LINE L1 5929 6163 0 492 298 45 30 chr17 13381432 13381630 -72056850 + MIR SINE MIR 32 232 -30 207 111 28 0 chr17 13382973 13383009 -72055471 + (TA)n Simple_repeat Simple_repeat 2 38 0 1453 187 32 32 chr17 13383095 13383411 -72055069 + MER2 DNA MER2_type 28 343 -2 387 0 0 0 chr17 13383411 13383454 -72055026 + (TG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr17 13384000 13384021 -72054459 + AT_rich Low_complexity Low_complexity 1 21 0 270 250 38 8 chr17 13384139 13384271 -72054209 + (TA)n Simple_repeat Simple_repeat 2 137 0 409 288 109 8 chr17 13384312 13384569 -72053911 + L1ME4a LINE L1 5838 6120 -1 413 286 93 37 chr17 13384999 13385160 -72053320 - MIR SINE MIR -70 192 23 379 385 11 35 chr17 13385445 13385793 -72052687 - L1M4 LINE L1 -1850 4296 3957 1618 228 49 41 chr17 13385821 13386352 -72052128 + L1MC5 LINE L1 6996 7530 -431 613 211 51 24 chr17 13386634 13386824 -72051656 + MER63 DNA MER1_type 27 1688 0 203 364 21 57 chr17 13387515 13387655 -72050825 - MER5A DNA MER1_type -48 141 7 1629 193 145 0 chr17 13387670 13388002 -72050478 - MER57A LTR ERV1 -9 394 15 283 325 0 12 chr17 13388899 13388979 -72049501 + MIR SINE MIR 14 92 -170 1378 43 0 0 chr17 13389003 13389166 -72049314 - AluY SINE Alu -12 299 137 357 75 0 0 chr17 13389579 13389632 -72048848 + (TG)n Simple_repeat Simple_repeat 2 54 0 212 216 175 31 chr17 13390124 13390221 -72048259 - MIR SINE MIR -3 259 149 367 295 105 16 chr17 13391184 13391374 -72047106 + MIR SINE MIR 1 207 -55 315 314 0 0 chr17 13391607 13391693 -72046787 - L1MC4 LINE L1 -1343 6699 6614 625 331 65 41 chr17 13391723 13392282 -72046198 - L2 LINE L2 -20 3252 2683 308 284 139 16 chr17 13392329 13392523 -72045957 - L1MEc LINE L1 -4987 1397 1180 817 200 47 0 chr17 13392546 13392716 -72045764 + MER58A DNA MER1_type 47 224 0 414 295 118 20 chr17 13392718 13392972 -72045508 - L1MEc LINE L1 -5301 1262 984 2041 93 15 0 chr17 13393088 13393357 -72045123 - AluSx SINE Alu -1 311 39 2028 141 3 3 chr17 13394261 13394573 -72043907 + AluSx SINE Alu 1 312 0 324 0 0 0 chr17 13394585 13394621 -72043859 + (TG)n Simple_repeat Simple_repeat 2 37 0 421 295 174 0 chr17 13395089 13395279 -72043201 - MIR SINE MIR -6 256 34 225 0 0 0 chr17 13395458 13395483 -72042997 + (A)n Simple_repeat Simple_repeat 1 25 0 32 101 0 0 chr17 13396056 13396165 -72042315 + AT_rich Low_complexity Low_complexity 1 109 0 2270 90 0 0 chr17 13396667 13396955 -72041525 - AluSc SINE Alu -13 296 9 2497 265 69 26 chr17 13396997 13397778 -72040702 - L1MD2 LINE L1 -17 6342 5528 784 297 117 26 chr17 13398002 13398430 -72040050 - LTR33A LTR ERVL 0 523 57 266 225 18 108 chr17 13398521 13398632 -72039848 - L1ME LINE L1 -439 5682 5582 2132 116 30 0 chr17 13398752 13399053 -72039427 + AluSx SINE Alu 1 310 -2 2130 213 59 68 chr17 13399167 13399877 -72038603 - L1ME1 LINE L1 -5 6161 5458 544 345 83 5 chr17 13401038 13401440 -72037040 - L2 LINE L2 -227 3045 2612 571 334 76 23 chr17 13401454 13401888 -72036592 - L2 LINE L2 -926 2388 1932 515 159 24 87 chr17 13402369 13402396 -72036084 - FRAM SINE Alu -136 176 149 716 91 9 0 chr17 13402396 13402506 -72035974 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 515 159 24 87 chr17 13402506 13402604 -72035876 - FRAM SINE Alu -163 149 59 32 0 0 0 chr17 13402693 13402725 -72035755 + AT_rich Low_complexity Low_complexity 1 32 0 198 324 0 0 chr17 13404290 13404358 -72034122 + L2 LINE L2 2228 2295 -1019 207 146 0 0 chr17 13405006 13405047 -72033433 + (CA)n Simple_repeat Simple_repeat 1 41 0 5430 238 85 55 chr17 13405607 13405795 -72032685 + L1M4 LINE L1 1748 1929 -4529 1597 103 60 4 chr17 13405795 13406027 -72032453 + AluSx SINE Alu 50 294 -18 5430 238 85 55 chr17 13406027 13409662 -72028818 + L1M4 LINE L1 1929 5769 -689 2527 52 7 3 chr17 13409662 13409971 -72028509 + AluY SINE Alu 1 310 -1 5430 238 85 55 chr17 13409971 13410091 -72028389 + L1M4 LINE L1 5769 5884 -574 308 228 63 39 chr17 13410095 13410222 -72028258 + L1ME1 LINE L1 4176 4305 -1841 475 266 63 14 chr17 13410244 13410451 -72028029 + L1ME1 LINE L1 5637 5853 -313 284 379 29 29 chr17 13410501 13410675 -72027805 + MIR3 SINE MIR 17 190 -18 22 56 0 0 chr17 13410676 13410712 -72027768 + AT_rich Low_complexity Low_complexity 1 36 0 280 287 106 70 chr17 13410809 13411178 -72027302 + MLT1K LTR MaLR 187 568 -20 301 193 70 0 chr17 13411480 13411537 -72026943 + L2 LINE L2 3212 3272 0 1940 128 54 0 chr17 13414525 13414629 -72023851 + AluSq SINE Alu 1 98 -342 185 0 0 39 chr17 13414629 13414655 -72023825 + (CTACT)n Simple_repeat Simple_repeat 1 25 0 1940 128 54 0 chr17 13414655 13414974 -72023506 + AluSq SINE Alu 98 440 0 210 71 0 0 chr17 13415775 13415803 -72022677 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 366 148 50 79 chr17 13415900 13416001 -72022479 + MER53 DNA DNA 1 98 -91 2311 210 43 2 chr17 13416020 13416505 -72021975 - LTR53 LTR ERVL -14 505 1 293 239 0 0 chr17 13416505 13416565 -72021915 + MER53 DNA DNA 125 184 -5 1032 156 0 0 chr17 13417154 13417334 -72021146 + CT-rich Low_complexity Low_complexity 1 180 0 294 143 0 0 chr17 13417334 13417383 -72021097 + (TCC)n Simple_repeat Simple_repeat 3 51 0 321 115 0 33 chr17 13417388 13417449 -72021031 - Alu SINE Alu -6 296 238 695 123 48 7 chr17 13417450 13417596 -72020884 + CT-rich Low_complexity Low_complexity 1 152 0 1171 189 13 34 chr17 13417596 13417829 -72020651 - AluJo SINE Alu -3 309 82 212 227 0 0 chr17 13418248 13418292 -72020188 - L2 LINE L2 -2 3311 3268 2201 119 3 0 chr17 13418526 13418819 -72019661 - AluSq SINE Alu -19 294 1 202 331 72 14 chr17 13418876 13419015 -72019465 + L2 LINE L2 2851 2997 -275 898 185 113 0 chr17 13419018 13419240 -72019240 + MER33 DNA MER1_type 2 248 -76 1024 133 129 63 chr17 13419378 13419525 -72018955 - L1MA8 LINE L1 -3 6288 6152 1525 226 0 7 chr17 13419525 13419822 -72018658 - AluJo SINE Alu -15 297 3 1024 133 129 63 chr17 13419822 13419960 -72018520 - L1MA8 LINE L1 -139 6152 5984 2394 70 0 13 chr17 13419987 13420287 -72018193 + AluY SINE Alu 1 296 -15 323 211 0 0 chr17 13420288 13420359 -72018121 + MER33 DNA MER1_type 254 324 0 284 314 53 92 chr17 13420381 13420588 -72017892 + L2 LINE L2 3030 3228 -44 * 938 333 118 35 chr17 13420582 13421267 -72017213 + L3 LINE CR1 621 1380 -197 2188 107 17 3 chr17 13421267 13421565 -72016915 - AluSq SINE Alu -11 302 1 938 333 118 35 chr17 13421565 13421662 -72016818 + L3 LINE CR1 1380 1468 -109 833 295 24 10 chr17 13421976 13422264 -72016216 - MER45C DNA AcHobo -626 327 36 2389 69 0 26 chr17 13422323 13422629 -72015851 - AluY SINE Alu -13 298 1 21 0 0 0 chr17 13423286 13423307 -72015173 + AT_rich Low_complexity Low_complexity 1 21 0 30 45 0 0 chr17 13424394 13424438 -72014042 + AT_rich Low_complexity Low_complexity 1 44 0 2200 104 14 0 chr17 13425189 13425476 -72013004 - AluSx SINE Alu -21 291 1 264 231 83 37 chr17 13426577 13426685 -72011795 + L1ME LINE L1 5518 5630 -491 384 22 0 0 chr17 13427209 13427254 -72011226 + (CA)n Simple_repeat Simple_repeat 1 45 0 747 226 42 6 chr17 13428120 13428288 -72010192 + MER5B DNA MER1_type 5 178 0 2267 82 0 0 chr17 13430025 13430345 -72008135 + AluSg SINE Alu 1 320 0 2592 49 0 13 chr17 13431043 13431351 -72007129 - AluY SINE Alu -7 304 1 465 295 32 32 chr17 13431427 13431644 -72006836 - MLT2F LTR ERVL -9 654 438 399 251 128 16 chr17 13431793 13431980 -72006500 - MLT2F LTR ERVL -455 208 1 510 204 0 0 chr17 13432296 13432409 -72006071 + GA-rich Low_complexity Low_complexity 4 116 0 212 258 150 42 chr17 13432957 13433077 -72005403 - MIR SINE MIR -10 252 120 1981 157 11 19 chr17 13433784 13434147 -72004333 + MLT1A1 LTR MaLR 1 360 -5 1976 124 17 3 chr17 13436441 13436732 -72001748 + AluSc SINE Alu 1 295 -14 2284 114 0 0 chr17 13437196 13437495 -72000985 + AluSx SINE Alu 4 302 -10 1101 191 69 3 chr17 13437903 13438325 -72000155 + MLT1D LTR MaLR 2 497 -8 183 333 0 0 chr17 13438572 13438620 -71999860 + L2 LINE L2 3242 3289 -24 729 211 0 0 chr17 13438629 13438762 -71999718 + FLAM_C SINE Alu 1 133 0 33 0 0 0 chr17 13438762 13438795 -71999685 + AT_rich Low_complexity Low_complexity 1 33 0 766 233 26 60 chr17 13440597 13440863 -71997617 - MER102b DNA MER1_type 0 341 85 241 337 0 42 chr17 13441624 13441719 -71996761 + MIR SINE MIR 37 127 -81 393 240 68 52 chr17 13441873 13441927 -71996553 - MLT1K LTR MaLR -10 578 526 194 62 31 0 chr17 13441927 13441959 -71996521 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 393 240 68 52 chr17 13441959 13442096 -71996384 - MLT1K LTR MaLR -62 526 384 1052 217 16 8 chr17 13442642 13442886 -71995594 - L1MB7 LINE L1 -16 6168 5923 2442 211 51 8 chr17 13442891 13443417 -71995063 + MER74A LTR ERVL 1 549 -9 1948 156 18 42 chr17 13443421 13443503 -71994977 - L1MB7 LINE L1 -251 5933 5851 3073 139 29 62 chr17 13443503 13443959 -71994521 - MER4B LTR ERV1 0 610 179 2007 130 4 0 chr17 13443959 13444236 -71994244 - AluSx SINE Alu -34 278 1 3073 139 29 62 chr17 13444236 13444410 -71994070 - MER4B LTR ERV1 -431 179 1 1948 156 18 42 chr17 13444410 13444831 -71993649 - L1MB7 LINE L1 -333 5851 5362 348 221 0 44 chr17 13444838 13444951 -71993529 - L1MB7 LINE L1 -1295 4851 4744 1305 247 28 42 chr17 13445039 13445472 -71993008 + MER39 LTR ERV1 259 685 -22 694 178 30 93 chr17 13446002 13446238 -71992242 - L1MB8 LINE L1 -12 6166 5946 1328 200 7 102 chr17 13446325 13446735 -71991745 + MLT1A2 LTR MaLR 4 374 0 284 164 15 60 chr17 13446845 13446912 -71991568 - LTR8A LTR ERV1 0 727 664 2496 191 63 44 chr17 13446962 13447627 -71990853 - LTR8A LTR ERV1 -49 678 1 590 248 12 81 chr17 13447657 13447915 -71990565 - L1M4b LINE L1 -5643 1216 977 933 235 45 87 chr17 13448091 13448556 -71989924 - LTR56 LTR ERV1 0 437 1 1236 202 72 35 chr17 13448710 13449087 -71989393 - LTR56-int LTR ERV1 -211 4912 4522 851 284 69 32 chr17 13449091 13449159 -71989321 - Charlie7 DNA MER1_type -2126 486 422 2238 114 0 3 chr17 13449159 13449465 -71989015 - AluSx SINE Alu -7 305 1 851 284 69 32 chr17 13449465 13449861 -71988619 - Charlie7 DNA MER1_type -2190 422 5 1095 176 22 57 chr17 13449883 13450110 -71988370 - MER20 DNA MER1_type 0 219 1 2000 77 91 11 chr17 13450431 13450716 -71987764 - AluSp SINE Alu -5 308 1 393 271 86 58 chr17 13451214 13451575 -71986905 + L1ME4a LINE L1 5513 5883 -238 2080 99 0 26 chr17 13452175 13452477 -71986003 - AluSg1 SINE Alu -15 294 1 281 365 21 0 chr17 13452640 13452736 -71985744 + L2 LINE L2 3173 3270 -2 291 300 0 27 chr17 13452971 13453081 -71985399 + CT-rich Low_complexity Low_complexity 1 107 0 682 162 28 22 chr17 13453093 13453272 -71985208 + CT-rich Low_complexity Low_complexity 1 180 0 645 300 162 40 chr17 13453551 13453921 -71984559 + L3 LINE CR1 656 1097 -480 2163 102 3 0 chr17 13453921 13454231 -71984249 - AluSp SINE Alu 0 311 1 645 300 162 40 chr17 13454231 13454329 -71984151 + L3 LINE CR1 1097 1182 -395 412 226 110 34 chr17 13454409 13454555 -71983925 - MLT1J1 LTR MaLR -38 408 252 2303 82 0 0 chr17 13454709 13455017 -71983463 - AluY SINE Alu 0 308 1 2205 125 0 3 chr17 13455402 13455715 -71982765 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 13455782 13455804 -71982676 + AT_rich Low_complexity Low_complexity 1 22 0 959 156 0 72 chr17 13455858 13456038 -71982442 - AluJb SINE Alu -12 300 134 417 304 23 39 chr17 13456157 13456347 -71982133 - MIR SINE MIR -34 228 43 218 196 0 20 chr17 13456588 13456639 -71981841 + CT-rich Low_complexity Low_complexity 2 51 0 2274 109 0 0 chr17 13458040 13458344 -71980136 - AluSg1 SINE Alu -3 306 3 264 380 80 16 chr17 13458561 13458748 -71979732 + MIR SINE MIR 20 218 -44 238 305 201 0 chr17 13460237 13460391 -71978089 + MIR SINE MIR 22 206 -56 2461 94 0 0 chr17 13460406 13460713 -71977767 + AluSc SINE Alu 1 307 -2 2245 114 27 0 chr17 13461233 13461532 -71976948 + AluSg SINE Alu 1 307 -3 2119 112 11 0 chr17 13463039 13463326 -71975154 - AluSx SINE Alu -22 290 1 27 49 0 0 chr17 13463694 13463735 -71974745 + AT_rich Low_complexity Low_complexity 1 41 0 199 298 117 0 chr17 13463765 13463859 -71974621 + MIR SINE MIR 77 181 -81 2257 60 7 11 chr17 13466416 13466745 -71971735 - AluY SINE Alu 0 328 1 3518 137 46 37 chr17 13467536 13467723 -71970757 - L1PA16 LINE L1 -2 6164 5980 2400 89 0 0 chr17 13467723 13468016 -71970464 - AluSc SINE Alu -16 293 1 3518 137 46 37 chr17 13468016 13468505 -71969975 - L1PA16 LINE L1 -186 5980 5482 352 316 22 29 chr17 13468621 13468760 -71969720 + HAL1 LINE L1 1227 1364 -1143 364 347 143 48 chr17 13468789 13469821 -71968659 - L2 LINE L2 -21 3251 2136 416 295 105 50 chr17 13470273 13470531 -71967949 + HAL1b LINE L1 303 574 -774 3757 261 135 42 chr17 13472294 13473968 -71964512 - HAL1 LINE L1 -6 2501 983 2158 110 14 0 chr17 13473968 13474259 -71964221 + AluSc SINE Alu 1 295 -14 3757 261 135 42 chr17 13474259 13474345 -71964135 - HAL1 LINE L1 -1524 983 906 2060 143 21 19 chr17 13474345 13474717 -71963763 - THE1C LTR MaLR -2 373 1 3757 261 135 42 chr17 13474717 13474902 -71963578 - HAL1 LINE L1 -1601 906 740 1861 152 28 0 chr17 13474902 13475185 -71963295 - AluJb SINE Alu -21 291 1 3757 261 135 42 chr17 13475185 13475525 -71962955 - HAL1 LINE L1 -1767 740 2 346 292 88 102 chr17 13475612 13475985 -71962495 - MLT1I LTR MaLR 0 409 42 1364 173 153 3 chr17 13476033 13476333 -71962147 + MER7A DNA MER2_type 1 343 -3 2835 7 0 0 chr17 13476621 13476930 -71961550 - AluYa5 SINE Alu -2 309 1 1770 116 59 98 chr17 13477427 13477816 -71960664 - THE1C LTR MaLR 0 375 2 1986 136 7 0 chr17 13478589 13478875 -71959605 - AluSq SINE Alu -16 297 10 338 293 32 64 chr17 13479469 13479657 -71958823 - MIR SINE MIR -61 201 20 23 54 0 0 chr17 13479820 13479857 -71958623 + AT_rich Low_complexity Low_complexity 1 37 0 2159 102 3 0 chr17 13480702 13480985 -71957495 - AluSq SINE Alu -17 296 13 595 333 38 0 chr17 13481048 13481258 -71957222 + MER90 LTR ERV1 10 227 -387 837 236 8 62 chr17 13481289 13481548 -71956932 + MER90 LTR ERV1 370 614 0 274 263 5 134 chr17 13482002 13482211 -71956269 - MER102a DNA MER1_type -3 327 146 503 130 10 0 chr17 13482211 13482311 -71956169 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 210 203 27 14 chr17 13482301 13482349 -71956131 + CT-rich Low_complexity Low_complexity 2 53 -23 * 2239 136 0 0 chr17 13482349 13482659 -71955821 - AluSg SINE Alu 0 310 1 210 203 27 14 chr17 13482659 13482684 -71955796 + CT-rich Low_complexity Low_complexity 53 76 0 558 187 0 0 chr17 13482712 13482819 -71955661 + MLT2B2 LTR ERVL 409 515 0 3360 224 77 41 chr17 13482828 13483789 -71954691 - L1M4 LINE L1 -5543 999 4 1875 122 0 0 chr17 13484123 13484378 -71954102 + AluSg SINE Alu 45 299 -11 265 270 84 51 chr17 13484393 13484608 -71953872 + L1ME4a LINE L1 5712 5933 -188 882 242 148 48 chr17 13487158 13487177 -71951303 - L2 LINE L2 -6 3307 3291 2170 110 0 17 chr17 13487177 13487476 -71951004 + AluSg SINE Alu 1 294 -16 882 242 148 48 chr17 13487476 13488114 -71950366 - L2 LINE L2 -22 3291 2576 197 175 0 25 chr17 13488237 13488277 -71950203 + L2 LINE L2 3263 3301 -12 307 270 98 76 chr17 13488941 13489138 -71949342 - MIR SINE MIR -21 187 14 323 291 129 9 chr17 13489555 13489765 -71948715 - L1ME LINE L1 -648 5522 5288 341 312 164 15 chr17 13489779 13490109 -71948371 - L1ME LINE L1 -908 5238 4860 189 0 0 0 chr17 13490574 13490595 -71947885 + (A)n Simple_repeat Simple_repeat 1 21 0 491 101 13 13 chr17 13490966 13491045 -71947435 + MADE1 DNA Mariner 2 80 0 1142 179 59 106 chr17 13491078 13491503 -71946977 + MLT1D LTR MaLR 1 405 -100 4733 166 8 4 chr17 13491506 13492520 -71945960 - L1PA16 LINE L1 -14 6152 5138 313 303 167 54 chr17 13492612 13492929 -71945551 + L2 LINE L2 1899 2251 -1063 665 82 10 0 chr17 13493264 13493361 -71945119 + (CAT)n Simple_repeat Simple_repeat 1 98 0 2073 86 32 11 chr17 13494579 13494901 -71943579 + AluSq SINE Alu 1 328 0 2361 103 0 3 chr17 13495223 13495525 -71942955 + AluSx SINE Alu 3 303 -9 570 297 138 67 chr17 13497909 13498922 -71939558 + L1MC/D LINE L1 3950 5034 -1112 537 278 60 43 chr17 13499092 13499595 -71938885 + L1MC/D LINE L1 5258 5780 -477 1776 177 6 6 chr17 13500087 13500415 -71938065 + MLT1A1 LTR MaLR 1 328 -37 230 98 0 24 chr17 13500589 13500630 -71937850 - MLT2C1 LTR ERVL -8 389 350 887 158 19 0 chr17 13500636 13500794 -71937686 - MLT1A2 LTR MaLR -213 161 1 1919 166 0 3 chr17 13501117 13501413 -71937067 - AluJb SINE Alu -17 295 1 244 248 23 39 chr17 13501818 13501947 -71936533 + L1P LINE L1 5293 5419 -735 39 0 0 0 chr17 13502450 13502489 -71935991 + AT_rich Low_complexity Low_complexity 1 39 0 341 286 129 34 chr17 13502630 13503152 -71935328 + L1ME3A LINE L1 5315 5890 -280 1035 171 0 0 chr17 13503364 13503528 -71934952 - AluSg/x SINE Alu -12 300 137 528 328 149 9 chr17 13503674 13504124 -71934356 + L1ME4a LINE L1 5320 5831 -290 253 221 39 13 chr17 13504173 13504250 -71934230 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 1568 223 55 26 chr17 13504608 13504993 -71933487 - MSTD LTR MaLR 0 396 1 553 146 0 0 chr17 13504997 13505086 -71933394 - MSTD LTR MaLR -307 89 1 2523 190 42 15 chr17 13505378 13505484 -71932996 - MER74A LTR ERVL 0 558 456 180 0 0 0 chr17 13505484 13505504 -71932976 + (CACAC)n Simple_repeat Simple_repeat 1 20 0 2523 190 42 15 chr17 13505504 13505938 -71932542 - MER74A LTR ERVL -102 456 3 228 197 82 0 chr17 13506394 13506455 -71932025 - L1MB4 LINE L1 -13 6167 6102 1693 154 226 37 chr17 13506817 13507278 -71931202 - LTR10A LTR ERV1 -61 548 1 2488 63 3 0 chr17 13507431 13507730 -71930750 - AluY SINE Alu -11 300 1 1914 156 13 19 chr17 13507829 13508136 -71930344 - AluJo SINE Alu -7 305 1 2086 137 0 0 chr17 13508429 13508721 -71929759 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 13508737 13508758 -71929722 + AT_rich Low_complexity Low_complexity 1 21 0 1126 224 7 31 chr17 13508758 13508793 -71929687 - L1MB7 LINE L1 -19 6165 6131 1990 118 0 7 chr17 13508793 13509065 -71929415 - AluSx SINE Alu -9 303 34 1126 224 7 31 chr17 13509065 13509315 -71929165 - L1MB7 LINE L1 -53 6131 5887 644 250 85 24 chr17 13509632 13509844 -71928636 + MIR SINE MIR 20 244 -18 2294 115 0 0 chr17 13511663 13511967 -71926513 + AluSq SINE Alu 2 305 -8 305 348 40 45 chr17 13512043 13512244 -71926236 - L2 LINE L2 0 3272 3073 302 286 118 53 chr17 13512404 13512761 -71925719 + L2 LINE L2 2934 3313 0 288 290 14 0 chr17 13513680 13513770 -71924710 - MIR SINE MIR -78 130 35 399 264 62 23 chr17 13514575 13514704 -71923776 + MIR SINE MIR 11 144 -118 2196 100 3 0 chr17 13514961 13515252 -71923228 - AluSg SINE Alu -18 292 1 2498 53 0 3 chr17 13515259 13515562 -71922918 - AluY SINE Alu -6 305 4 2158 117 15 3 chr17 13516125 13516458 -71922022 - L1MC1 LINE L1 0 6333 5997 1957 148 0 13 chr17 13516687 13516985 -71921495 + AluSx SINE Alu 1 294 -18 468 235 31 19 chr17 13517015 13517338 -71921142 + (TA)n Simple_repeat Simple_repeat 1 327 0 249 303 43 19 chr17 13517453 13517615 -71920865 - L1MB7 LINE L1 -2073 5735 5570 597 209 36 75 chr17 13517722 13517978 -71920502 + MER57B LTR ERV1 10 266 -137 402 211 11 0 chr17 13518092 13518182 -71920298 + MER57A LTR ERV1 313 403 0 1869 155 11 3 chr17 13518581 13518865 -71919615 + AluJo SINE Alu 9 294 -18 322 279 132 23 chr17 13520093 13520222 -71918258 - MIR SINE MIR -71 191 49 1642 234 24 53 chr17 13520544 13520853 -71917627 + L1M4 LINE L1 2627 2944 -3202 2229 100 10 6 chr17 13520853 13521164 -71917316 + AluSx SINE Alu 1 312 0 1642 234 24 53 chr17 13521164 13521373 -71917107 + L1M4 LINE L1 2944 3125 -3021 718 172 13 25 chr17 13521373 13521530 -71916950 + L1PB4 LINE L1 5999 6153 -3 1642 234 24 53 chr17 13521530 13521648 -71916832 + L1M4 LINE L1 3125 3245 -2901 21 0 0 0 chr17 13522601 13522622 -71915858 + AT_rich Low_complexity Low_complexity 1 21 0 239 217 17 9 chr17 13523795 13523866 -71914614 - Charlie8 DNA MER1_type -989 1428 1372 455 299 94 40 chr17 13523901 13524252 -71914228 - Charlie8 DNA MER1_type -1976 441 72 244 250 116 9 chr17 13524635 13524747 -71913733 + L1ME LINE L1 5748 5871 -250 21 57 0 0 chr17 13524834 13524869 -71913611 + AT_rich Low_complexity Low_complexity 1 35 0 371 235 175 49 chr17 13525119 13525302 -71913178 + MLT1J LTR MaLR 3 208 -303 319 263 20 10 chr17 13526029 13526128 -71912352 - L1MCa LINE L1 -6320 106 7 1021 181 87 46 chr17 13526362 13526737 -71911743 + MSTC LTR MaLR 1 428 0 275 311 0 0 chr17 13527012 13527086 -71911394 - MIR SINE MIR -93 115 42 269 373 79 17 chr17 13527117 13527294 -71911186 - MER5A DNA MER1_type -1 188 1 2211 95 7 0 chr17 13527420 13527704 -71910776 + AluSg SINE Alu 1 286 -24 1740 71 0 0 chr17 13527978 13528217 -71910263 + L1PB1 LINE L1 5553 5791 -360 442 61 0 101 chr17 13528217 13528415 -71910065 + (TA)n Simple_repeat Simple_repeat 1 178 0 436 62 10 93 chr17 13528436 13528630 -71909850 + (TA)n Simple_repeat Simple_repeat 2 179 0 332 153 0 0 chr17 13528745 13528804 -71909676 + L1PB1 LINE L1 5793 5851 -300 203 196 22 0 chr17 13528920 13528966 -71909514 + GA-rich Low_complexity Low_complexity 2 48 0 1997 78 85 0 chr17 13528967 13529250 -71909230 + L1PB1 LINE L1 5838 6144 -7 482 282 206 10 chr17 13529273 13529482 -71908998 - MIR SINE MIR -5 257 8 482 290 50 54 chr17 13529574 13529833 -71908647 + MIR SINE MIR 3 260 -2 25 31 0 0 chr17 13529835 13529867 -71908613 + AT_rich Low_complexity Low_complexity 1 32 0 978 117 0 0 chr17 13530060 13530205 -71908275 - L1PB1 LINE L1 -138 6013 5869 217 174 22 0 chr17 13530436 13530482 -71907998 + GA-rich Low_complexity Low_complexity 2 48 0 22 0 0 0 chr17 13530612 13530634 -71907846 + AT_rich Low_complexity Low_complexity 1 22 0 367 323 82 56 chr17 13530678 13531179 -71907301 + L1 LINE L1 4757 5276 -870 2177 109 0 45 chr17 13531179 13531492 -71906988 + AluSc SINE Alu 1 299 -10 367 323 82 56 chr17 13531492 13531548 -71906932 + L1 LINE L1 5276 5329 -817 32 57 0 0 chr17 13531646 13531699 -71906781 + AT_rich Low_complexity Low_complexity 1 53 0 277 211 32 11 chr17 13531736 13531831 -71906649 + L1ME4a LINE L1 6023 6119 -2 290 329 77 43 chr17 13532990 13533224 -71905256 + MIR SINE MIR 6 247 -15 661 298 143 40 chr17 13533318 13533738 -71904742 + L2 LINE L2 2851 3313 0 1420 166 10 30 chr17 13534889 13535185 -71903295 - L1MB8 LINE L1 -5 6173 5884 2252 89 0 0 chr17 13535545 13535867 -71902613 + AluSx SINE Alu 1 322 0 214 239 28 28 chr17 13536390 13536461 -71902019 + L2 LINE L2 2447 2517 -797 205 303 37 37 chr17 13536468 13536577 -71901903 + MIR SINE MIR 80 188 -74 190 267 285 24 chr17 13536629 13536794 -71901686 + MIR SINE MIR 19 226 -36 534 332 81 14 chr17 13538352 13538635 -71899845 - L2 LINE L2 -75 3197 2896 214 381 102 0 chr17 13538723 13538899 -71899581 - L2 LINE L2 -568 2746 2553 462 269 72 0 chr17 13539150 13539317 -71899163 - L1M4 LINE L1 -1341 4805 4627 246 310 43 0 chr17 13539364 13539480 -71899000 + HAL1 LINE L1 1646 1766 -741 504 241 45 0 chr17 13539943 13540076 -71898404 - MIR SINE MIR -60 202 64 334 307 12 60 chr17 13540202 13540368 -71898112 + HAL1b LINE L1 754 911 -437 380 235 62 67 chr17 13540579 13540758 -71897722 - MER5B DNA MER1_type 0 178 1 1768 62 0 0 chr17 13540778 13540988 -71897492 + AluY SINE Alu 1 210 -101 2047 126 36 7 chr17 13541171 13541473 -71897007 - AluSx SINE Alu -1 311 1 1761 68 106 0 chr17 13541495 13541732 -71896748 - AluY SINE Alu -11 300 39 189 426 40 0 chr17 13542457 13542558 -71895922 - MIR SINE MIR -110 152 48 2547 74 0 0 chr17 13542877 13543188 -71895292 - AluY SINE Alu 0 311 1 420 228 0 0 chr17 13543213 13543292 -71895188 + FRAM SINE Alu 66 144 -32 1292 183 8 24 chr17 13543515 13543761 -71894719 + AluJo SINE Alu 39 280 -32 689 186 0 7 chr17 13543767 13543912 -71894568 + GA-rich Low_complexity Low_complexity 1 144 0 2306 249 74 30 chr17 13546055 13546809 -71891671 - MER21B LTR ERV1 -58 805 19 373 220 18 46 chr17 13546807 13546916 -71891564 - MER21B LTR ERV1 -757 106 1 * 2012 97 24 14 chr17 13547090 13547380 -71891100 - AluSq SINE Alu -20 293 1 22 0 0 0 chr17 13547382 13547404 -71891076 + AT_rich Low_complexity Low_complexity 1 22 0 460 345 45 42 chr17 13547435 13547882 -71890598 + HAL1b LINE L1 381 802 -546 2378 86 0 0 chr17 13548379 13548671 -71889809 + AluSx SINE Alu 1 292 -20 326 331 83 0 chr17 13548695 13548949 -71889531 + L1MEc LINE L1 1538 1812 -4584 429 210 74 40 chr17 13548968 13549144 -71889336 + L1MEc LINE L1 1909 2090 -4306 * 1296 248 146 6 chr17 13549132 13549757 -71888723 + L1MEc LINE L1 3194 3905 -2310 1231 105 0 0 chr17 13550307 13550479 -71888001 - AluSc SINE Alu -17 292 121 225 0 0 0 chr17 13550480 13550505 -71887975 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2054 97 0 53 chr17 13550505 13550805 -71887675 - AluSp SINE Alu -29 284 1 3608 188 143 116 chr17 13550901 13551422 -71887058 - L1MD3 LINE L1 -3 7992 7486 583 217 8 0 chr17 13551422 13551542 -71886938 - MLT1F1 LTR MaLR -442 125 5 3608 188 143 116 chr17 13551542 13552467 -71886013 - L1MD3 LINE L1 -509 7486 6385 346 252 105 59 chr17 13552586 13552824 -71885656 - HAL1b LINE L1 -872 476 228 2361 92 13 0 chr17 13552915 13553221 -71885259 + AluSx SINE Alu 1 310 -2 304 189 144 0 chr17 13554288 13554378 -71884102 + MIR SINE MIR 27 129 -133 306 375 81 6 chr17 13554692 13554852 -71883628 - MIR3 SINE MIR -21 187 16 237 368 66 9 chr17 13555462 13555674 -71882806 - MLT1K LTR MaLR -224 364 141 2206 92 0 41 chr17 13556036 13556211 -71882269 - AluSx SINE Alu -9 303 145 2370 66 0 3 chr17 13556211 13556499 -71881981 - AluY SINE Alu -16 295 9 2206 92 0 41 chr17 13556499 13556639 -71881841 - AluSx SINE Alu -167 145 1 218 276 17 0 chr17 13556963 13557021 -71881459 + MIR3 SINE MIR 126 184 -24 260 225 88 61 chr17 13558106 13558221 -71880259 + MIR SINE MIR 19 151 -57 724 233 93 35 chr17 13558906 13559152 -71879328 - MIR SINE MIR -12 250 10 586 256 156 74 chr17 13559386 13559439 -71879041 - MLT1L LTR MaLR -77 538 491 2163 126 0 0 chr17 13559439 13559763 -71878717 - AluSq SINE Alu 0 324 1 586 256 156 74 chr17 13559763 13560087 -71878393 - MLT1L LTR MaLR -124 491 129 234 0 0 0 chr17 13560298 13560324 -71878156 + (CA)n Simple_repeat Simple_repeat 2 27 0 198 196 39 20 chr17 13560379 13560430 -71878050 + MIR SINE MIR 96 147 -115 207 174 0 43 chr17 13560430 13560476 -71878004 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 2527 55 0 3 chr17 13560756 13561067 -71877413 + AluY SINE Alu 1 310 -1 2510 71 0 3 chr17 13562253 13562563 -71875917 - AluSc SINE Alu 0 309 1 180 0 0 0 chr17 13562568 13562588 -71875892 + (T)n Simple_repeat Simple_repeat 1 20 0 186 325 62 25 chr17 13563220 13563300 -71875180 - MIR SINE MIR -90 118 36 694 286 188 14 chr17 13563700 13564286 -71874194 - L2 LINE L2 -3 3310 2614 302 345 36 36 chr17 13564577 13564771 -71873709 - L1ME LINE L1 -394 5727 5534 22 35 0 0 chr17 13564874 13564903 -71873577 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 0 0 chr17 13565200 13565221 -71873259 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 187 397 43 0 chr17 13565319 13565435 -71873045 - L2 LINE L2 -16 3256 3136 545 236 74 83 chr17 13565685 13565901 -71872579 + MER58C DNA MER1_type 1 214 -1 431 180 328 32 chr17 13568102 13568291 -71870189 - MLT1G LTR MaLR -24 566 322 323 241 96 24 chr17 13568374 13568457 -71870023 - MLT1G LTR MaLR -381 168 80 410 175 25 0 chr17 13568528 13568608 -71869872 + MER31B LTR ERV1 1 82 -384 2424 230 38 44 chr17 13568608 13569273 -71869207 + MER67B LTR ERV1 1 661 0 525 352 146 12 chr17 13569274 13569768 -71868712 - L2 LINE L2 -700 2614 2055 198 246 119 32 chr17 13569865 13569991 -71868489 - L2 LINE L2 -1883 1431 1295 2178 99 3 40 chr17 13571366 13571689 -71866791 + AluY SINE Alu 1 311 0 234 62 0 0 chr17 13571696 13571728 -71866752 + (TA)n Simple_repeat Simple_repeat 2 33 0 1563 63 0 0 chr17 13571732 13571922 -71866558 - L1P4 LINE L1 -456 5712 5523 240 163 0 0 chr17 13571923 13571966 -71866514 + (TA)n Simple_repeat Simple_repeat 1 43 0 301 286 55 0 chr17 13571972 13572063 -71866417 + L1MC4 LINE L1 6607 6702 -1340 2239 92 0 10 chr17 13572293 13572585 -71865895 + AluSc SINE Alu 1 289 -20 406 295 6 60 chr17 13572646 13572812 -71865668 - MIR SINE MIR -2 260 104 202 283 11 144 chr17 13572980 13573167 -71865313 - L2 LINE L2 -186 3086 2925 552 237 71 12 chr17 13573200 13573369 -71865111 - MER104 DNA MER2_type -1 179 1 2152 107 21 3 chr17 13573395 13573684 -71864796 - AluSq SINE Alu -19 294 1 1914 110 4 18 chr17 13573949 13574221 -71864259 - L1PA10 LINE L1 0 6168 5901 2892 53 68 35 chr17 13574221 13574264 -71864216 + L1PA10 LINE L1 5451 5491 -677 2040 127 7 0 chr17 13574264 13574555 -71863925 + AluSx SINE Alu 3 295 -17 2892 53 68 35 chr17 13574555 13574907 -71863573 + L1PA10 LINE L1 5491 5859 -309 308 227 43 43 chr17 13574907 13575048 -71863432 - MER113 DNA MER1_type? -349 172 32 213 313 10 10 chr17 13575074 13575173 -71863307 - L2 LINE L2 -1052 2262 2164 192 191 0 24 chr17 13575519 13575561 -71862919 - L2 LINE L2 -6 3307 3267 584 215 6 0 chr17 13576276 13576439 -71862041 + (TAGA)n Simple_repeat Simple_repeat 2 165 0 195 290 29 0 chr17 13576535 13576604 -71861876 + MIR SINE MIR 79 149 -113 328 313 124 39 chr17 13576646 13576879 -71861601 - MIR SINE MIR 0 262 10 584 113 0 0 chr17 13577470 13577550 -71860930 + MADE1 DNA Mariner 1 80 0 237 132 0 0 chr17 13577786 13577824 -71860656 + (TATG)n Simple_repeat Simple_repeat 3 40 0 2255 94 6 38 chr17 13578002 13578321 -71860159 - AluSp SINE Alu -4 309 1 372 273 68 37 chr17 13579804 13579965 -71858515 - MIR SINE MIR -89 173 8 1792 172 48 12 chr17 13580471 13580803 -71857677 - MER7A DNA MER2_type -3 343 2 258 376 106 35 chr17 13580806 13581061 -71857419 + L2 LINE L2 2999 3271 -1 641 280 95 13 chr17 13581776 13582011 -71856469 - MIR SINE MIR 0 262 5 2434 80 3 6 chr17 13582154 13582466 -71856014 + AluY SINE Alu 1 311 0 180 154 0 0 chr17 13583200 13583226 -71855254 - L3b LINE CR1 -264 1319 1294 309 290 122 19 chr17 13584461 13584568 -71853912 + MIR SINE MIR 6 123 -139 21 71 0 0 chr17 13585344 13585386 -71853094 + AT_rich Low_complexity Low_complexity 1 42 0 2282 108 0 3 chr17 13585676 13585982 -71852498 + AluSx SINE Alu 1 305 -7 711 179 16 65 chr17 13586289 13586473 -71852007 + MER53 DNA DNA 1 175 -14 994 87 0 16 chr17 13587175 13587301 -71851179 - AluSq/x SINE Alu -189 124 1 27 0 0 0 chr17 13587302 13587329 -71851151 + AT_rich Low_complexity Low_complexity 1 27 0 209 254 51 0 chr17 13589436 13589495 -71848985 + L3 LINE CR1 1516 1577 0 524 143 0 11 chr17 13590057 13590148 -71848332 - L1MA3 LINE L1 0 6305 6216 300 268 37 0 chr17 13590163 13590245 -71848235 - MIR SINE MIR -108 154 70 2289 80 23 7 chr17 13590498 13590800 -71847680 - AluY SINE Alu -4 307 1 291 28 0 0 chr17 13590991 13591027 -71847453 + (TG)n Simple_repeat Simple_repeat 1 36 0 1239 216 79 16 chr17 13591175 13591480 -71847000 + MER2 DNA MER2_type 22 345 0 250 300 112 58 chr17 13591634 13591947 -71846533 - L1MC/D LINE L1 -2150 5658 5329 5243 235 90 10 chr17 13592092 13594287 -71844193 - L1ME3 LINE L1 -2 6160 3690 370 225 44 131 chr17 13594296 13594331 -71844149 + LTR41 LTR ERVL 549 585 -188 324 48 0 0 chr17 13594331 13594373 -71844107 + (TG)n Simple_repeat Simple_repeat 2 43 0 370 225 44 131 chr17 13594373 13594497 -71843983 + LTR41 LTR ERVL 585 694 -79 743 246 11 6 chr17 13594729 13594904 -71843576 - MER58A DNA MER1_type -12 212 37 2350 84 3 0 chr17 13595224 13595521 -71842959 - AluSp SINE Alu -15 298 1 480 266 130 16 chr17 13595546 13595730 -71842750 + MIR SINE MIR 7 211 -51 22 0 0 0 chr17 13595810 13595832 -71842648 + AT_rich Low_complexity Low_complexity 1 22 0 361 193 53 70 chr17 13596258 13596271 -71842209 - L1MC4 LINE L1 -124 7918 7906 396 0 0 0 chr17 13596271 13596315 -71842165 + (CTATT)n Simple_repeat Simple_repeat 1 44 0 361 193 53 70 chr17 13596315 13596415 -71842065 - L1MC4 LINE L1 -136 7906 7807 2297 64 0 3 chr17 13596416 13596734 -71841746 + AluY SINE Alu 1 317 0 675 167 54 40 chr17 13596742 13596923 -71841557 - MER31B LTR ERV1 -250 235 7 2296 106 0 3 chr17 13596989 13597300 -71841180 + AluSg SINE Alu 1 310 0 1350 198 156 70 chr17 13598551 13598980 -71839500 - MER31B LTR ERV1 0 466 1 271 309 29 51 chr17 13599250 13599425 -71839055 - MLT1K LTR MaLR -6 582 412 2491 61 3 0 chr17 13599811 13600108 -71838372 + AluY SINE Alu 1 298 -13 2444 80 0 0 chr17 13600662 13600963 -71837517 + AluY SINE Alu 1 301 -10 2007 192 14 11 chr17 13602826 13603185 -71835295 + MLT1A1 LTR MaLR 4 363 -2 772 227 23 0 chr17 13604446 13604622 -71833858 + MER5A DNA MER1_type 7 186 -3 228 295 36 86 chr17 13604791 13604930 -71833550 - MER5A DNA MER1_type -2 187 56 312 48 0 0 chr17 13605257 13605299 -71833181 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 1737 139 15 7 chr17 13605310 13605584 -71832896 - AluJb SINE Alu -36 276 1 180 200 29 0 chr17 13607491 13607526 -71830954 + MER5A DNA MER1_type 151 186 -3 309 200 148 17 chr17 13608051 13608166 -71830314 - MER113 DNA MER1_type? -349 172 43 3904 200 24 48 chr17 13608505 13608685 -71829795 + L1MB8 LINE L1 5145 5328 -850 2130 138 0 0 chr17 13608685 13608989 -71829491 + AluSx SINE Alu 3 306 -6 3904 200 24 48 chr17 13608989 13609852 -71828628 + L1MB8 LINE L1 5328 6178 0 6136 129 14 9 chr17 13610091 13611584 -71826896 + L1PB1 LINE L1 4667 6170 0 234 377 74 0 chr17 13611720 13611842 -71826638 + L2 LINE L2 3137 3267 -5 2153 129 126 0 chr17 13612799 13613179 -71825301 + MSTA LTR MaLR 1 428 0 3246 178 32 16 chr17 13613208 13613887 -71824593 - L1MB5 LINE L1 -9 6165 5476 409 121 0 30 chr17 13613919 13613985 -71824495 - L1PA8A LINE L1 -6 6125 6062 1591 65 0 0 chr17 13613985 13614200 -71824280 + L1PA8A LINE L1 5845 6059 -72 1391 187 70 6 chr17 13614197 13614683 -71823797 - L1MB5 LINE L1 -709 5471 4961 * 2430 229 18 42 chr17 13614686 13615465 -71823015 - L1MB5 LINE L1 -1616 4530 3771 1649 108 0 0 chr17 13615707 13615919 -71822561 + AluSq SINE Alu 1 212 -101 384 232 33 93 chr17 13616116 13616267 -71822213 - MLT1G LTR MaLR -7 583 442 966 303 22 38 chr17 13617927 13618376 -71820104 + LTR16B LTR ERVL 23 464 0 253 313 12 12 chr17 13619074 13619154 -71819326 + MIR SINE MIR 58 137 -71 217 227 0 0 chr17 13620959 13621003 -71817477 + (CA)n Simple_repeat Simple_repeat 2 45 0 182 302 93 47 chr17 13621064 13621193 -71817287 - L2 LINE L2 0 3313 3179 467 279 0 62 chr17 13622879 13623040 -71815440 + MER63A DNA MER1_type 60 210 0 1985 148 48 31 chr17 13623446 13623804 -71814676 + THE1B LTR MaLR 1 364 0 2281 79 4 0 chr17 13624673 13624972 -71813508 + AluSp SINE Alu 6 305 0 232 190 152 25 chr17 13625536 13625615 -71812865 + MIR SINE MIR 164 252 -10 479 360 50 4 chr17 13625689 13625931 -71812549 + MIR SINE MIR 2 254 -8 364 150 0 83 chr17 13626662 13626855 -71811625 + (TA)n Simple_repeat Simple_repeat 2 178 0 542 155 0 64 chr17 13626894 13627081 -71811399 + (TA)n Simple_repeat Simple_repeat 2 176 0 328 195 0 77 chr17 13627118 13627313 -71811167 + (TA)n Simple_repeat Simple_repeat 1 180 0 310 181 0 106 chr17 13627353 13627552 -71810928 + (TA)n Simple_repeat Simple_repeat 1 178 0 358 151 0 80 chr17 13627557 13627848 -71810632 + (TATATG)n Simple_repeat Simple_repeat 1 267 0 319 204 0 68 chr17 13627856 13628047 -71810433 + (TA)n Simple_repeat Simple_repeat 1 178 0 547 158 0 86 chr17 13628089 13628490 -71809990 + (TA)n Simple_repeat Simple_repeat 1 366 0 520 131 0 106 chr17 13628527 13628726 -71809754 + (TA)n Simple_repeat Simple_repeat 1 178 0 619 177 0 32 chr17 13628762 13628948 -71809532 + (TA)n Simple_repeat Simple_repeat 1 180 0 2614 55 0 0 chr17 13629880 13630191 -71808289 + AluY SINE Alu 1 311 0 2099 130 3 0 chr17 13630439 13630724 -71807756 - AluSx SINE Alu -21 291 6 231 336 112 15 chr17 13634336 13634470 -71804010 - MIR SINE MIR 0 262 116 306 363 0 0 chr17 13634693 13634839 -71803641 + MER117 DNA MER1_type 1 146 -51 1947 164 73 168 chr17 13635128 13635931 -71802549 + LTR8A LTR ERV1 1 727 0 222 62 0 0 chr17 13636154 13636186 -71802294 + (TG)n Simple_repeat Simple_repeat 2 33 0 255 286 26 0 chr17 13636847 13636924 -71801556 - MIR3 SINE MIR -6 202 124 1510 211 76 110 chr17 13636925 13637479 -71801001 + MLT1E LTR MaLR 1 535 -58 1669 246 47 11 chr17 13637602 13638050 -71800430 + MLT1C LTR MaLR 1 464 -3 258 136 0 0 chr17 13638171 13638215 -71800265 + (GA)n Simple_repeat Simple_repeat 1 44 0 1024 221 64 15 chr17 13638420 13638923 -71799557 + L1MEc LINE L1 2101 2587 -3628 325 283 28 14 chr17 13638921 13639066 -71799414 + L1MA10 LINE L1 6180 6326 -8 * 2053 153 129 0 chr17 13639205 13639584 -71798896 + MSTA LTR MaLR 1 428 0 7899 173 34 36 chr17 13639586 13641168 -71797312 + MSTA-int LTR MaLR 3 1580 0 2190 152 123 0 chr17 13641168 13641549 -71796931 + MSTA LTR MaLR 1 428 0 21 89 0 0 chr17 13641581 13641637 -71796843 + AT_rich Low_complexity Low_complexity 1 56 0 304 289 133 16 chr17 13643444 13643572 -71794908 - MIR3 SINE MIR -21 187 45 1807 220 0 8 chr17 13643781 13644149 -71794331 + MLT1A1 LTR MaLR 1 365 0 791 217 111 24 chr17 13644444 13644651 -71793829 - MIR SINE MIR -26 236 12 1866 182 3 3 chr17 13645032 13645334 -71793146 + AluJb SINE Alu 1 302 -10 2338 95 0 3 chr17 13645401 13645705 -71792775 + AluSq SINE Alu 1 303 -10 336 261 59 8 chr17 13645748 13645867 -71792613 - MER69A DNA AcHobo -26 151 27 1159 142 75 12 chr17 13646551 13646791 -71791689 + L1MB3 LINE L1 5929 6183 0 488 142 26 9 chr17 13647923 13647935 -71790545 + (TA)n Simple_repeat Simple_repeat 2 12 -104 1958 123 11 7 chr17 13647935 13648219 -71790261 + AluSx SINE Alu 1 285 -27 488 142 26 9 chr17 13648219 13648319 -71790161 + (TA)n Simple_repeat Simple_repeat 12 116 0 2453 79 13 0 chr17 13649183 13649486 -71788994 + AluY SINE Alu 1 307 -4 817 78 66 6 chr17 13651975 13652142 -71786338 + GA-rich Low_complexity Low_complexity 2 178 0 647 250 61 25 chr17 13652304 13652500 -71785980 - MER20 DNA MER1_type -16 203 1 200 373 0 13 chr17 13652828 13652903 -71785577 + L3 LINE CR1 1497 1570 -7 324 218 0 26 chr17 13655031 13655109 -71783371 + MIR SINE MIR 86 161 -101 34 42 0 0 chr17 13655588 13655636 -71782844 + AT_rich Low_complexity Low_complexity 1 48 0 578 281 51 18 chr17 13656321 13656538 -71781942 + MIR SINE MIR 17 240 -22 372 263 53 74 chr17 13657442 13657632 -71780848 - L1MC5 LINE L1 -48 7913 7728 3863 154 16 3 chr17 13657725 13658366 -71780114 + MER39B LTR ERV1 4 652 -1 493 68 96 0 chr17 13659698 13659771 -71778709 + MADE1 DNA Mariner 1 80 0 295 70 0 0 chr17 13659772 13659815 -71778665 + MADE1 DNA Mariner 38 80 0 233 331 103 22 chr17 13660088 13660272 -71778208 + L3b LINE CR1 1114 1312 -271 2522 161 54 2 chr17 13660283 13660706 -71777774 + L1MB2 LINE L1 5712 6156 -15 664 149 52 45 chr17 13660706 13660832 -71777648 + L1MB2 LINE L1 6037 6171 0 2263 99 13 0 chr17 13662340 13662643 -71775837 + AluSc SINE Alu 1 307 -2 1709 122 15 4 chr17 13662759 13663022 -71775458 + L1MA5 LINE L1 6035 6300 0 2070 269 80 15 chr17 13663024 13663474 -71775006 + L1ME3A LINE L1 5352 5873 -297 2114 109 3 17 chr17 13663474 13663776 -71774704 + AluSg SINE Alu 1 298 -12 2070 269 80 15 chr17 13663776 13664090 -71774390 + L1ME3A LINE L1 5873 6165 -5 268 235 35 47 chr17 13664467 13664552 -71773928 - MIR SINE MIR -95 167 84 2397 76 3 13 chr17 13665185 13665488 -71772992 + AluSg SINE Alu 1 300 -10 21 0 0 0 chr17 13665520 13665541 -71772939 + AT_rich Low_complexity Low_complexity 1 21 0 478 321 74 0 chr17 13665659 13665821 -71772659 + MIR3 SINE MIR 23 196 -12 2057 94 6 44 chr17 13666216 13666536 -71771944 + AluSx SINE Alu 1 308 -4 511 258 73 28 chr17 13666699 13666877 -71771603 - MIR SINE MIR -61 201 16 182 337 11 11 chr17 13668001 13668093 -71770387 + L2 LINE L2 2130 2221 -1093 253 232 0 110 chr17 13668380 13668462 -71770018 + MER96 DNA MER1_type? 103 175 0 254 185 0 19 chr17 13668705 13668759 -71769721 + HAL1 LINE L1 1630 1682 -825 211 184 40 40 chr17 13669027 13669103 -71769377 + GA-rich Low_complexity Low_complexity 1 76 0 451 344 59 27 chr17 13669165 13669351 -71769129 - MIR3 SINE MIR -14 194 3 1127 121 0 0 chr17 13670150 13670307 -71768173 - AluSg/x SINE Alu -16 296 140 3140 220 105 30 chr17 13670553 13671461 -71767019 + Zaphod DNA AcHobo 15 990 -3041 2297 8 0 0 chr17 13671522 13671769 -71766711 + AluYb8 SINE Alu 64 310 -8 958 191 6 0 chr17 13671770 13671943 -71766537 + L1MB5 LINE L1 5908 6081 -93 655 271 47 0 chr17 13671946 13672116 -71766364 + MER58A DNA MER1_type 47 224 0 1937 189 50 12 chr17 13672124 13672543 -71765937 + Zaphod DNA AcHobo 3595 4029 -2 452 316 92 9 chr17 13672877 13673212 -71765268 - L1ME4a LINE L1 -29 6092 5730 24 0 0 0 chr17 13673339 13673363 -71765117 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 13673819 13673840 -71764640 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 13673870 13673893 -71764587 + AT_rich Low_complexity Low_complexity 1 23 0 480 135 0 27 chr17 13674044 13674118 -71764362 + AluS SINE Alu 2 73 -245 326 256 128 43 chr17 13674152 13674316 -71764164 + L1ME1 LINE L1 5971 6148 -18 1958 136 7 0 chr17 13674615 13674901 -71763579 - AluSx SINE Alu -24 288 1 2172 215 47 41 chr17 13674923 13675470 -71763010 - L1MC/D LINE L1 -743 5403 5275 2034 114 0 4 chr17 13675470 13675782 -71762698 + AluSg SINE Alu 1 311 0 2172 215 47 41 chr17 13675782 13675998 -71762482 - L1MC/D LINE L1 -871 5275 5062 1590 69 0 0 chr17 13676239 13676427 -71762053 - AluY SINE Alu -123 188 1 278 336 108 42 chr17 13676719 13676933 -71761547 - L2 LINE L2 -5 3267 3040 2076 133 27 0 chr17 13677084 13677385 -71761095 - AluSx SINE Alu -3 309 1 272 317 57 54 chr17 13677563 13677897 -71760583 + L1MC4a LINE L1 5617 5951 -1857 1013 255 143 74 chr17 13677945 13678420 -71760060 + MLT1H LTR MaLR 29 536 -13 265 266 43 11 chr17 13678445 13678539 -71759941 + L1ME4a LINE L1 5941 6037 -84 273 57 0 0 chr17 13678985 13679020 -71759460 + (ATG)n Simple_repeat Simple_repeat 2 36 0 237 289 117 23 chr17 13679424 13679552 -71758928 + MIR SINE MIR 50 189 -73 2049 113 11 11 chr17 13680044 13680326 -71758154 - AluSx SINE Alu -3 309 28 931 174 35 91 chr17 13681271 13681501 -71756979 - MER20 DNA MER1_type -2 217 1 328 196 49 84 chr17 13681502 13681645 -71756835 - MER112 DNA MER1_type -57 203 66 428 48 16 0 chr17 13682261 13682324 -71756156 + (CA)n Simple_repeat Simple_repeat 1 64 0 22 80 0 0 chr17 13683511 13683561 -71754919 + AT_rich Low_complexity Low_complexity 1 50 0 1701 143 44 0 chr17 13683714 13683987 -71754493 - AluJb SINE Alu -27 285 1 706 212 13 7 chr17 13684113 13684264 -71754216 + L1MD2 LINE L1 6191 6342 -17 240 326 37 37 chr17 13684294 13684484 -71753996 - L1M4 LINE L1 -3641 2505 2316 369 0 0 0 chr17 13685916 13685957 -71752523 + (TA)n Simple_repeat Simple_repeat 2 42 0 2485 72 3 19 chr17 13686076 13686394 -71752086 - AluSp SINE Alu 0 313 1 330 246 35 35 chr17 13687721 13687835 -71750645 + LTR16A LTR ERVL 1 114 -336 392 268 174 6 chr17 13687923 13688100 -71750380 + LTR16A LTR ERVL 191 439 -11 192 291 70 92 chr17 13688144 13688415 -71750065 - L2 LINE L2 -188 3084 2820 21 71 0 0 chr17 13688868 13688910 -71749570 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr17 13689448 13689482 -71748998 + (CA)n Simple_repeat Simple_repeat 2 35 0 432 311 68 6 chr17 13689802 13689979 -71748501 - MIR SINE MIR -56 206 19 189 0 0 0 chr17 13692349 13692370 -71746110 + (CA)n Simple_repeat Simple_repeat 2 22 0 238 277 27 89 chr17 13692446 13692558 -71745922 + MIR SINE MIR 103 207 -55 203 341 23 11 chr17 13692717 13692805 -71745675 - MIR SINE MIR -6 256 168 3133 204 42 25 chr17 13693815 13693866 -71744614 + MER82 DNA MER2_type 1 50 -603 1581 158 0 79 chr17 13693866 13694182 -71744298 + AluJb SINE Alu 3 293 -19 2234 102 0 0 chr17 13694186 13694498 -71743982 + AluSp SINE Alu 1 312 0 3133 204 42 25 chr17 13694498 13695082 -71743398 + MER82 DNA MER2_type 52 653 0 651 230 5 97 chr17 13696159 13696355 -71742125 + MER45A DNA AcHobo 1 178 0 180 0 0 0 chr17 13696524 13696544 -71741936 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 1065 272 139 25 chr17 13698302 13698740 -71739740 - MLT1H1 LTR MaLR -7 548 61 208 233 0 0 chr17 13699878 13699921 -71738559 + MIR3 SINE MIR 162 204 -4 1549 196 40 61 chr17 13701378 13701488 -71736992 + MLT1B LTR MaLR 5 116 -274 2047 139 3 7 chr17 13701488 13701790 -71736690 + AluSx SINE Alu 1 301 -11 1549 196 40 61 chr17 13701790 13702057 -71736423 + MLT1B LTR MaLR 116 374 -16 3560 192 52 28 chr17 13702094 13702809 -71735671 + MER21B LTR ERV1 19 750 -113 476 293 28 42 chr17 13702922 13702993 -71735487 + L3 LINE CR1 1207 1277 -300 697 62 0 0 chr17 13702993 13703073 -71735407 + MADE1 DNA Mariner 1 80 0 476 293 28 42 chr17 13703073 13703213 -71735267 + L3 LINE CR1 1277 1415 -162 228 267 17 0 chr17 13703365 13703425 -71735055 + MIR SINE MIR 68 128 -134 1871 123 7 18 chr17 13705161 13705437 -71733043 + AluSx SINE Alu 25 297 -15 2239 114 7 7 chr17 13705700 13706008 -71732472 - AluSc SINE Alu -1 308 1 277 173 77 0 chr17 13706222 13706274 -71732206 + L2 LINE L2 3216 3271 -1 311 290 100 0 chr17 13706342 13706442 -71732038 + MER103 DNA DNA 57 166 0 3091 218 56 22 chr17 13706666 13707378 -71731102 + MER21B LTR ERV1 21 756 -107 1457 237 31 20 chr17 13707579 13707933 -71730547 - MLT1A2 LTR MaLR -12 362 5 6614 84 11 2 chr17 13708050 13708869 -71729611 + LTR12 LTR ERV1 1 826 0 283 194 117 48 chr17 13709417 13709520 -71728960 + MER103 DNA DNA 2 111 -55 216 0 0 0 chr17 13709598 13709622 -71728858 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 897 256 104 42 chr17 13709687 13710073 -71728407 + MLT1J2 LTR MaLR 3 412 -38 368 224 55 91 chr17 13710078 13710150 -71728330 - MER96B DNA MER1_type? 0 417 344 261 0 0 0 chr17 13710150 13710179 -71728301 + (CAA)n Simple_repeat Simple_repeat 2 30 0 368 224 55 91 chr17 13710179 13710229 -71728251 - MER96B DNA MER1_type? -73 344 300 2361 71 3 0 chr17 13710229 13710525 -71727955 + AluY SINE Alu 1 297 -14 368 224 55 91 chr17 13710525 13710566 -71727914 - MER96B DNA MER1_type? -117 300 259 1630 104 0 9 chr17 13710568 13710790 -71727690 + AluSc SINE Alu 60 279 -30 859 83 0 0 chr17 13710681 13710790 -71727690 + AluSc SINE Alu 171 335 0 439 36 0 0 chr17 13710790 13710846 -71727634 + (TAAA)n Simple_repeat Simple_repeat 3 124 0 2416 88 0 10 chr17 13711516 13711823 -71726657 - AluSg SINE Alu -6 304 1 2288 76 0 3 chr17 13715668 13716000 -71722480 + AluY SINE Alu 1 331 0 2336 88 0 0 chr17 13716014 13716309 -71722171 + AluSg SINE Alu 1 295 -15 368 331 7 0 chr17 13717396 13717544 -71720936 + HAL1b LINE L1 381 529 -819 858 217 6 6 chr17 13717574 13717749 -71720731 + FAM SINE Alu 1 175 0 22 0 0 0 chr17 13717808 13717830 -71720650 + AT_rich Low_complexity Low_complexity 1 22 0 494 293 33 22 chr17 13718355 13718536 -71719944 + MIR SINE MIR 4 186 -76 321 177 30 67 chr17 13718887 13719051 -71719429 + (TTATA)n Simple_repeat Simple_repeat 2 159 0 261 0 0 0 chr17 13719258 13719287 -71719193 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 620 222 72 57 chr17 13719394 13719450 -71719030 - L1MC4 LINE L1 0 8042 7988 2478 80 3 0 chr17 13719450 13719761 -71718719 + AluSx SINE Alu 1 312 0 620 222 72 57 chr17 13719761 13719983 -71718497 - L1MC4 LINE L1 -54 7988 7760 466 294 17 28 chr17 13720485 13720665 -71717815 + MER5B DNA MER1_type 1 178 0 2107 124 0 23 chr17 13720828 13721134 -71717346 - AluSg SINE Alu -11 299 1 22 56 0 0 chr17 13723379 13723415 -71715065 + AT_rich Low_complexity Low_complexity 1 36 0 1396 146 0 5 chr17 13723823 13724036 -71714444 + MER2 DNA MER2_type 1 212 -133 240 225 0 0 chr17 13724087 13724127 -71714353 + MER2 DNA MER2_type 296 335 -10 2181 130 7 7 chr17 13724154 13724462 -71714018 - AluSx SINE Alu -2 310 3 2091 119 19 19 chr17 13724698 13725010 -71713470 + AluJb SINE Alu 1 312 0 512 291 53 102 chr17 13725285 13725480 -71713000 - L1MEd LINE L1 -4967 1152 949 15329 125 28 15 chr17 13725480 13727866 -71710614 + Tigger1 DNA MER2_type 1 2418 0 512 291 53 102 chr17 13727866 13728540 -71709940 - L1MEd LINE L1 -5170 949 326 1514 190 44 3 chr17 13729917 13730212 -71708268 - AluJb SINE Alu -5 307 1 180 0 0 0 chr17 13730297 13730317 -71708163 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 403 312 53 32 chr17 13730626 13730815 -71707665 - MARNA DNA Mariner -358 228 36 1959 152 3 0 chr17 13731199 13731501 -71706979 - AluSx SINE Alu -9 303 1 194 325 50 0 chr17 13731670 13731750 -71706730 - MIR3 SINE MIR -38 170 87 246 256 22 44 chr17 13732174 13732264 -71706216 - L2 LINE L2 -8 3305 3218 1239 228 70 31 chr17 13733140 13733495 -71704985 + MLT1A2 LTR MaLR 5 373 -1 2096 96 64 3 chr17 13733577 13733859 -71704621 - AluSx SINE Alu -13 299 1 2280 109 0 0 chr17 13733879 13734183 -71704297 + AluY SINE Alu 1 304 -7 821 239 28 0 chr17 13735371 13735547 -71702933 + MER5A DNA MER1_type 9 189 0 1535 250 109 42 chr17 13735574 13736098 -71702382 - MLT1F1 LTR MaLR -8 559 1 2707 118 0 0 chr17 13736338 13736702 -71701778 - THE1B LTR MaLR 0 364 1 232 340 26 26 chr17 13737037 13737190 -71701290 - MIR3 SINE MIR -5 203 51 198 0 0 0 chr17 13737310 13737332 -71701148 + (TG)n Simple_repeat Simple_repeat 2 23 0 819 288 39 10 chr17 13737374 13737680 -71700800 + L1ME4a LINE L1 5513 5827 -294 2083 104 3 50 chr17 13737708 13738025 -71700455 + AluSx SINE Alu 1 302 -10 192 328 78 0 chr17 13738102 13738166 -71700314 + L2 LINE L2 3204 3272 0 21 0 0 0 chr17 13738451 13738472 -71700008 + AT_rich Low_complexity Low_complexity 1 21 0 514 236 69 58 chr17 13738581 13738819 -71699661 + L1ME LINE L1 5505 5745 -376 2236 119 3 3 chr17 13738861 13739171 -71699309 + AluSx SINE Alu 1 310 -2 1216 103 139 5 chr17 13739222 13739416 -71699064 + AluSg/x SINE Alu 92 311 -1 266 104 0 119 chr17 13739889 13739956 -71698524 + L1MA7 LINE L1 6231 6289 -2 26 0 0 0 chr17 13739957 13739983 -71698497 + AT_rich Low_complexity Low_complexity 1 26 0 2297 103 7 0 chr17 13740053 13740355 -71698125 + AluSp SINE Alu 1 304 -9 23 0 0 0 chr17 13740538 13740561 -71697919 + AT_rich Low_complexity Low_complexity 1 23 0 1854 121 0 0 chr17 13740678 13740926 -71697554 + AluSx SINE Alu 52 299 -13 181 167 19 111 chr17 13741218 13741272 -71697208 + L3 LINE CR1 1523 1571 -6 989 98 0 7 chr17 13743894 13744047 -71694433 + (GGAA)n Simple_repeat Simple_repeat 4 155 0 2595 80 0 0 chr17 13744630 13744942 -71693538 - AluSx SINE Alu 0 312 1 2322 85 7 7 chr17 13745283 13745589 -71692891 - AluSc SINE Alu -3 306 1 1277 196 21 55 chr17 13745927 13746028 -71692452 + MER33 DNA MER1_type 10 113 -2472 2506 58 0 10 chr17 13746028 13746340 -71692140 + AluY SINE Alu 1 309 -2 1277 196 21 55 chr17 13746340 13746564 -71691916 + MER33 DNA MER1_type 113 324 0 2377 90 0 0 chr17 13746616 13746906 -71691574 + AluSc SINE Alu 1 290 -19 923 193 6 33 chr17 13747557 13747738 -71690742 + MER58A DNA MER1_type 49 224 0 275 224 6 138 chr17 13747947 13748121 -71690359 + MER112 DNA MER1_type 8 158 -102 2029 62 82 4 chr17 13748132 13748389 -71690091 - AluY SINE Alu -18 293 17 348 216 152 32 chr17 13748640 13748765 -71689715 + Charlie8 DNA MER1_type 116 255 -2162 204 40 0 0 chr17 13749109 13749134 -71689346 + (CA)n Simple_repeat Simple_repeat 2 26 0 2172 125 3 3 chr17 13750477 13750789 -71687691 - AluSx SINE Alu 0 312 1 2171 135 0 3 chr17 13751091 13751402 -71687078 - AluSx SINE Alu -2 310 1 386 248 44 24 chr17 13751600 13751734 -71686746 + MIR SINE MIR 26 162 -65 180 0 0 0 chr17 13752676 13752696 -71685784 + (A)n Simple_repeat Simple_repeat 1 20 0 2185 200 52 40 chr17 13753149 13753724 -71684756 - L1MD3 LINE L1 -11 7984 7403 279 0 0 0 chr17 13755289 13755320 -71683160 + (TTG)n Simple_repeat Simple_repeat 1 31 0 279 0 0 0 chr17 13755861 13755892 -71682588 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 283 0 0 chr17 13756632 13756685 -71681795 + (TA)n Simple_repeat Simple_repeat 1 53 0 24 0 0 0 chr17 13760256 13760280 -71678200 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr17 13761279 13761299 -71677181 + (GGCTG)n Simple_repeat Simple_repeat 1 20 0 23 0 0 0 chr17 13762179 13762202 -71676278 + AT_rich Low_complexity Low_complexity 1 23 0 270 0 0 0 chr17 13762273 13762303 -71676177 + (TG)n Simple_repeat Simple_repeat 1 30 0 211 172 259 0 chr17 13763173 13763231 -71675249 + MIR3 SINE MIR 118 190 -18 1295 162 14 22 chr17 13763423 13763645 -71674835 - AluJb SINE Alu -12 300 81 1036 187 66 19 chr17 13763652 13763909 -71674571 - MER33 DNA MER1_type -54 270 2 423 289 144 26 chr17 13763937 13764131 -71674349 - LTR33 LTR ERVL 0 521 305 330 146 0 0 chr17 13764528 13764583 -71673897 - MLT2B2 LTR ERVL -2 513 459 2324 182 69 52 chr17 13764607 13764913 -71673567 - MLT2B3 LTR ERVL -22 532 212 2325 104 0 0 chr17 13764913 13765211 -71673269 + AluSx SINE Alu 1 298 -14 2324 182 69 52 chr17 13765211 13765427 -71673053 - MLT2B3 LTR ERVL -342 212 1 285 243 18 45 chr17 13766198 13766309 -71672171 - LTR33 LTR ERVL -338 183 76 2412 93 3 0 chr17 13766506 13766816 -71671664 - AluSp SINE Alu -2 311 1 301 285 96 105 chr17 13766839 13767172 -71671308 + L2 LINE L2 2938 3267 -5 2017 113 39 0 chr17 13767231 13767515 -71670965 + AluSp SINE Alu 6 300 -13 2326 95 20 0 chr17 13768028 13768332 -71670148 + AluSg SINE Alu 1 310 0 240 111 0 0 chr17 13768739 13768775 -71669705 + (A)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr17 13768901 13768931 -71669549 + AT_rich Low_complexity Low_complexity 1 30 0 445 291 16 8 chr17 13768996 13769123 -71669357 + MER91B DNA MER1_type 50 177 -13 760 302 178 10 chr17 13769262 13769679 -71668801 + MLT1K LTR MaLR 40 526 -62 1873 176 0 0 chr17 13769748 13770054 -71668426 - AluJb SINE Alu -6 306 1 1044 113 0 0 chr17 13770121 13770262 -71668218 - AluY SINE Alu -9 302 162 182 390 55 20 chr17 13770916 13771116 -71667364 - L2 LINE L2 -657 2657 2451 482 191 162 7 chr17 13771926 13772062 -71666418 - MER103 DNA DNA -7 159 3 1738 225 69 29 chr17 13774860 13775309 -71663171 - MLT1C LTR MaLR 0 467 1 2222 87 3 7 chr17 13775355 13775671 -71662809 + AluSp SINE Alu 1 315 0 620 308 44 24 chr17 13775696 13775946 -71662534 - MIR SINE MIR 0 262 8 1258 225 25 74 chr17 13776509 13776833 -71661647 + AluJb SINE Alu 1 308 -4 1239 201 146 17 chr17 13777285 13777573 -71660907 + MLT1A2 LTR MaLR 3 327 -47 676 316 110 51 chr17 13777591 13778517 -71659963 - L1M4 LINE L1 -1451 4695 3715 263 275 12 12 chr17 13779292 13779372 -71659108 - MER116 DNA Mariner 0 80 1 543 278 96 13 chr17 13779992 13780317 -71658163 + L1MC4a LINE L1 5563 5778 -343 710 83 0 0 chr17 13780410 13780523 -71657957 - AluSp/q SINE Alu 0 313 201 304 353 38 50 chr17 13780833 13781071 -71657409 - L1M4 LINE L1 -2967 3179 2945 387 286 29 14 chr17 13781072 13781212 -71657268 - MIR SINE MIR -5 257 116 942 305 59 53 chr17 13781215 13781720 -71656760 + MLT1K LTR MaLR 71 578 -10 256 238 0 16 chr17 13781831 13781894 -71656586 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1243 296 65 100 chr17 13781991 13782528 -71655952 - L2 LINE L2 -566 2748 2193 2017 161 0 0 chr17 13782528 13782832 -71655648 - AluSx SINE Alu -8 304 1 1243 296 65 100 chr17 13782832 13782972 -71655508 - L2 LINE L2 -1121 2193 2050 1211 178 73 128 chr17 13782972 13783214 -71655266 - MLT1A1 LTR MaLR 0 365 150 1471 94 13 73 chr17 13783214 13783447 -71655033 - AluSc SINE Alu -16 293 75 1211 178 73 128 chr17 13783447 13783587 -71654893 - MLT1A1 LTR MaLR -215 150 4 1243 296 65 100 chr17 13783587 13784008 -71654472 - L2 LINE L2 -1264 2050 1688 2250 163 75 2 chr17 13784117 13784517 -71653963 - LTR47A LTR ERVL -23 429 1 279 290 173 43 chr17 13784517 13784679 -71653801 - L2 LINE L2 -1725 1589 1407 194 360 79 14 chr17 13784658 13784797 -71653683 + L2 LINE L2 833 980 -2334 * 449 307 113 65 chr17 13784846 13785204 -71653276 - L2 LINE L2 -1944 1370 990 2317 90 0 28 chr17 13785204 13785526 -71652954 + AluSq SINE Alu 1 313 0 449 307 113 65 chr17 13785526 13785564 -71652916 - L2 LINE L2 -2324 990 955 2482 84 0 0 chr17 13785703 13786012 -71652468 - AluSx SINE Alu -2 310 2 482 210 84 118 chr17 13786013 13786251 -71652229 + MER112 DNA MER1_type 29 258 -2 375 276 24 16 chr17 13786253 13786376 -71652104 - L2 LINE L2 -2511 803 680 243 150 0 0 chr17 13786412 13786452 -71652028 - MER3 DNA MER1_type -14 195 156 1526 215 109 36 chr17 13786461 13786991 -71651489 - L1ME1 LINE L1 -4 6162 5594 557 239 182 0 chr17 13787492 13787651 -71650829 - MER5A DNA MER1_type -1 188 1 232 274 137 29 chr17 13787676 13787778 -71650702 + MIR SINE MIR 47 159 -103 2466 86 0 0 chr17 13787786 13788088 -71650392 + AluSc SINE Alu 1 302 -7 342 115 0 0 chr17 13788088 13788140 -71650340 + (TA)n Simple_repeat Simple_repeat 2 53 0 2029 125 7 33 chr17 13788796 13789101 -71649379 + AluSx SINE Alu 1 297 -15 201 74 0 0 chr17 13789183 13789210 -71649270 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2310 89 0 10 chr17 13789288 13789591 -71648889 + AluSg SINE Alu 1 300 -10 1981 161 49 122 chr17 13789710 13790099 -71648381 + LTR32 LTR ERVL 15 362 -109 2811 63 0 0 chr17 13790099 13790433 -71648047 + L1PA5 LINE L1 5818 6151 -3 1981 161 49 122 chr17 13790433 13790533 -71647947 + LTR32 LTR ERVL 362 468 -3 275 320 79 28 chr17 13790602 13790780 -71647700 - MIR SINE MIR -14 248 62 288 252 61 87 chr17 13791551 13791630 -71646850 - MIR SINE MIR -55 207 130 2337 95 7 0 chr17 13791630 13791926 -71646554 + AluSc SINE Alu 1 298 -11 288 252 61 87 chr17 13791926 13791961 -71646519 - MIR SINE MIR -132 130 96 1921 90 83 21 chr17 13792493 13792783 -71645697 - AluSc SINE Alu 0 309 2 2395 77 0 0 chr17 13793063 13793360 -71645120 - AluY SINE Alu -14 297 1 2148 123 3 0 chr17 13794107 13794407 -71644073 + AluSp SINE Alu 1 301 -12 2009 121 7 4 chr17 13794753 13795034 -71643446 + AluSc SINE Alu 1 282 -27 414 0 0 0 chr17 13795034 13795080 -71643400 + (CA)n Simple_repeat Simple_repeat 2 47 0 358 256 37 26 chr17 13795149 13795319 -71643161 + HAL1b LINE L1 343 1597 -864 204 214 14 29 chr17 13795357 13795418 -71643062 + (TA)n Simple_repeat Simple_repeat 2 63 -7 2585 169 58 9 chr17 13795418 13795863 -71642617 - LTR24 LTR ERV1 0 467 1 204 214 14 29 chr17 13795863 13795871 -71642609 + (TA)n Simple_repeat Simple_repeat 63 70 0 32 0 0 0 chr17 13795944 13795976 -71642504 + AT_rich Low_complexity Low_complexity 1 32 0 228 163 0 0 chr17 13796206 13796249 -71642231 + A-rich Low_complexity Low_complexity 1 43 0 2593 173 86 49 chr17 13796300 13796890 -71641590 - LTR9 LTR ERV1 0 612 1 2169 109 26 0 chr17 13797107 13797409 -71641071 + AluSp SINE Alu 3 312 -1 22 35 0 0 chr17 13797512 13797541 -71640939 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr17 13797920 13797962 -71640518 + AT_rich Low_complexity Low_complexity 1 42 0 752 258 26 82 chr17 13798220 13798423 -71640057 + MIR SINE MIR 10 196 -66 4422 129 9 5 chr17 13798423 13799053 -71639427 + MER41B LTR ERV1 3 635 0 752 258 26 82 chr17 13799053 13799117 -71639363 + MIR SINE MIR 196 262 0 21 36 0 0 chr17 13799631 13799659 -71638821 + AT_rich Low_complexity Low_complexity 1 28 0 1822 198 101 60 chr17 13799892 13800559 -71637921 + LTR48 LTR ERV1 3 644 0 246 32 0 0 chr17 13800943 13800974 -71637506 + (TG)n Simple_repeat Simple_repeat 2 32 0 339 207 37 24 chr17 13801618 13801700 -71636780 + MER5A DNA MER1_type 86 168 -21 762 183 39 0 chr17 13803315 13803468 -71635012 + MER5A DNA MER1_type 3 161 -28 613 208 57 0 chr17 13803592 13803698 -71634782 + MER81 DNA DNA 3 114 0 1783 90 113 19 chr17 13803936 13804220 -71634260 + AluSc SINE Alu 1 308 0 552 299 116 9 chr17 13804882 13805106 -71633374 + MIR SINE MIR 5 252 -10 219 334 32 60 chr17 13805968 13806123 -71632357 - MIR SINE MIR -79 183 35 275 231 0 0 chr17 13806339 13806391 -71632089 - MIR SINE MIR 0 262 211 969 164 7 0 chr17 13806406 13806558 -71631922 + FRAM SINE Alu 2 154 -22 259 224 121 5 chr17 13806597 13806699 -71631781 - MIR SINE MIR -47 161 52 1538 199 70 64 chr17 13808209 13808478 -71630002 - MLT1B LTR MaLR 0 390 117 1918 173 0 0 chr17 13808478 13808778 -71629702 - AluJb SINE Alu -12 300 1 1538 199 70 64 chr17 13808778 13808896 -71629584 - MLT1B LTR MaLR -273 117 1 211 315 22 0 chr17 13809764 13809853 -71628627 + MIR SINE MIR 30 120 -88 289 337 21 11 chr17 13810011 13810106 -71628374 - L2 LINE L2 -30 3242 3147 2219 255 62 35 chr17 13810240 13811258 -71627222 + L1ME3 LINE L1 5029 6083 -79 1358 97 44 117 chr17 13811258 13811327 -71627153 + MER30 DNA MER1_type 1 73 -157 1825 122 0 43 chr17 13811327 13811605 -71626875 + AluSg SINE Alu 31 296 -14 1358 97 44 117 chr17 13811605 13811783 -71626697 + MER30 DNA MER1_type 73 230 0 2219 255 62 35 chr17 13811783 13811835 -71626645 + L1ME3 LINE L1 6083 6132 -30 2471 69 0 3 chr17 13811937 13812242 -71626238 + AluY SINE Alu 1 304 -7 1869 178 57 9 chr17 13812357 13812689 -71625791 - MER7A DNA MER2_type 0 346 1 228 191 0 21 chr17 13812727 13812774 -71625706 + CT-rich Low_complexity Low_complexity 2 47 0 225 250 0 0 chr17 13812774 13812818 -71625662 - MER5B DNA MER1_type -134 44 1 662 311 56 15 chr17 13813052 13813319 -71625161 + MLT1F LTR MaLR 36 313 -229 22 56 0 0 chr17 13813763 13813799 -71624681 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr17 13813893 13813922 -71624558 + AT_rich Low_complexity Low_complexity 1 29 0 2518 149 49 8 chr17 13814634 13815104 -71623376 - L1MB3 LINE L1 -16 6167 5679 2558 133 26 14 chr17 13815310 13815731 -71622749 + MSTB LTR MaLR 1 426 0 237 250 22 11 chr17 13816307 13816399 -71622081 + (TATATG)n Simple_repeat Simple_repeat 4 96 0 1073 247 84 77 chr17 13816502 13816956 -71621524 - L2 LINE L2 -32 3281 2825 335 104 0 0 chr17 13817057 13817105 -71621375 + MER74B LTR ERVL 1 48 -574 263 316 5 31 chr17 13817882 13818078 -71620402 + L1ME4a LINE L1 5830 6020 -101 * 2033 236 57 35 chr17 13818067 13818348 -71620132 + L1ME LINE L1 272 545 -5525 2337 78 3 16 chr17 13818348 13818657 -71619823 + AluY SINE Alu 3 307 -4 2033 236 57 35 chr17 13818657 13819116 -71619364 + L1ME LINE L1 545 1028 -5042 2239 107 0 0 chr17 13819175 13819475 -71619005 + AluSg SINE Alu 1 300 -10 302 179 164 8 chr17 13819672 13819806 -71618674 - L1ME LINE L1 -375 5746 5592 235 218 26 26 chr17 13819794 13819872 -71618608 - L1ME3A LINE L1 0 6170 6093 * 270 319 22 0 chr17 13819902 13820037 -71618443 - L1M4 LINE L1 -1481 4665 4528 412 180 16 0 chr17 13820037 13820159 -71618321 + (TA)n Simple_repeat Simple_repeat 2 125 0 1921 264 96 29 chr17 13820224 13821559 -71616921 - L1ME2 LINE L1 -3 6161 4744 738 192 14 70 chr17 13821724 13821938 -71616542 - L1MA9 LINE L1 -30 6282 6081 257 336 47 19 chr17 13821971 13822078 -71616402 + L2 LINE L2 3199 3308 -5 26 0 0 0 chr17 13822376 13822402 -71616078 + AT_rich Low_complexity Low_complexity 1 26 0 304 308 105 21 chr17 13822472 13822615 -71615865 + MIR3 SINE MIR 5 159 -49 235 300 15 15 chr17 13823431 13823524 -71614956 + (TA)n Simple_repeat Simple_repeat 1 96 -34 8988 102 16 12 chr17 13823524 13823873 -71614607 + HSMAR1 DNA Mariner 3 349 -938 2295 74 0 20 chr17 13823873 13824172 -71614308 + AluY SINE Alu 1 293 -18 8988 102 16 12 chr17 13824172 13825103 -71613377 + HSMAR1 DNA Mariner 349 1287 0 235 300 15 15 chr17 13825103 13825139 -71613341 + (TA)n Simple_repeat Simple_repeat 95 130 0 22 56 0 0 chr17 13825568 13825604 -71612876 + AT_rich Low_complexity Low_complexity 1 36 0 1703 146 60 27 chr17 13825690 13826059 -71612421 - SVA Other Other -573 813 433 27 0 0 0 chr17 13826135 13826162 -71612318 + AT_rich Low_complexity Low_complexity 1 27 0 279 0 0 0 chr17 13826185 13826216 -71612264 + (GA)n Simple_repeat Simple_repeat 2 32 0 2093 112 0 0 chr17 13826217 13826494 -71611986 - AluSx SINE Alu -35 277 1 12694 192 50 46 chr17 13826775 13829666 -71608814 + L1M2 LINE L1 1 2902 -3947 4781 186 18 24 chr17 13829664 13830774 -71607706 + L1M2 LINE L1 3775 4877 -1971 * 13173 217 32 56 chr17 13830803 13833162 -71605318 + L1P5 LINE L1 3 2418 -4449 653 147 0 0 chr17 13833162 13833257 -71605223 - AluSp/q SINE Alu -31 282 188 13173 217 32 56 chr17 13833257 13833949 -71604531 + L1P5 LINE L1 2418 3125 -3742 1811 128 23 56 chr17 13833949 13834255 -71604225 - AluSq SINE Alu 0 313 18 13173 217 32 56 chr17 13834255 13834320 -71604160 + L1P5 LINE L1 3125 3190 -3677 1306 73 12 0 chr17 13834320 13834484 -71603996 + AluY SINE Alu 130 295 -16 13173 217 32 56 chr17 13834484 13836092 -71602388 + L1P5 LINE L1 3190 4646 -2221 731 179 0 0 chr17 13836092 13836209 -71602271 + FLAM_C SINE Alu 1 117 -16 13173 217 32 56 chr17 13836209 13837766 -71600714 + L1P5 LINE L1 4646 6240 -627 483 278 42 21 chr17 13838370 13838514 -71599966 + MIR3 SINE MIR 58 204 -4 183 200 0 0 chr17 13838651 13838686 -71599794 - MIR SINE MIR -2 260 226 2468 32 0 3 chr17 13839780 13840064 -71598416 - AluY SINE Alu 0 311 29 231 0 50 25 chr17 13840234 13840274 -71598206 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 1409 213 26 3 chr17 13841030 13841340 -71597140 - L1ME2 LINE L1 -8 6550 6234 2225 253 96 53 chr17 13841348 13842607 -71595873 - L1ME2 LINE L1 -1062 5478 4166 22 35 0 0 chr17 13842897 13842926 -71595554 + AT_rich Low_complexity Low_complexity 1 29 0 873 288 81 28 chr17 13842926 13843347 -71595133 - L1ME2 LINE L1 -4549 1991 1627 2197 279 93 29 chr17 13843361 13843682 -71594798 - L1MEc LINE L1 -2365 3850 3551 306 0 0 0 chr17 13843682 13843716 -71594764 + (TG)n Simple_repeat Simple_repeat 1 34 0 2197 279 93 29 chr17 13843716 13845122 -71593358 - L1MEc LINE L1 -2664 3551 1958 1368 225 15 0 chr17 13845132 13845403 -71593077 + AluJo SINE Alu 21 295 -17 6231 191 59 50 chr17 13845521 13846562 -71591918 - L1MC3 LINE L1 -8 7777 6747 2106 153 0 6 chr17 13846562 13846876 -71591604 + AluSx SINE Alu 1 312 0 6231 191 59 50 chr17 13846876 13847205 -71591275 - L1MC3 LINE L1 -1038 6747 6389 2336 154 50 21 chr17 13847205 13847627 -71590853 + Tigger2a DNA MER2_type 1 434 0 6231 191 59 50 chr17 13847627 13847804 -71590676 - L1MC3 LINE L1 -1396 6389 6215 1819 158 40 3 chr17 13847805 13848102 -71590378 - AluJb SINE Alu -4 308 1 361 237 18 9 chr17 13848177 13848291 -71590189 - L1P LINE L1 -1045 5101 4987 * 1144 235 131 70 chr17 13848283 13848695 -71589785 - L1P3 LINE L1 -6015 446 10 3741 222 46 39 chr17 13848710 13848822 -71589658 - L1MC3 LINE L1 -743 5403 5293 7073 46 14 1 chr17 13848822 13850237 -71588243 + L1PA7 LINE L1 4719 6146 -8 3741 222 46 39 chr17 13850237 13852026 -71586454 - L1MC3 LINE L1 -853 5293 4313 1302 244 152 18 chr17 13852027 13852421 -71586059 - MER82 DNA MER2_type -1 652 206 636 190 8 0 chr17 13852733 13852854 -71585626 - MER82 DNA MER2_type -451 202 81 644 118 0 9 chr17 13852887 13852997 -71585483 + (TTCC)n Simple_repeat Simple_repeat 3 111 0 723 191 109 0 chr17 13853066 13853213 -71585267 + MER5A DNA MER1_type 2 164 -25 259 230 240 20 chr17 13853309 13853409 -71585071 - MIR SINE MIR -100 162 41 2192 69 0 41 chr17 13853409 13853699 -71584781 + AluY SINE Alu 28 305 -6 2348 97 0 3 chr17 13853869 13854180 -71584300 + AluSg SINE Alu 1 310 0 260 140 228 18 chr17 13855878 13855935 -71582545 + Tigger2 DNA MER2_type 1 69 -2649 * 2574 148 25 9 chr17 13855925 13856363 -71582117 + Tigger2 DNA MER2_type 2273 2717 -1 345 238 89 20 chr17 13856650 13856794 -71581686 - MIR SINE MIR -57 151 39 359 169 13 26 chr17 13856929 13857006 -71581474 - MER116 DNA Mariner -1 79 4 2549 7 0 0 chr17 13857181 13857456 -71581024 + AluY SINE Alu 37 311 0 1727 183 3 0 chr17 13857975 13858285 -71580195 + AluJo SINE Alu 1 311 0 602 241 84 66 chr17 13858907 13859151 -71579329 - MLT1J2 LTR MaLR -2 444 194 1159 217 42 42 chr17 13859151 13859354 -71579126 + MER58B DNA MER1_type 5 210 -2210 2212 89 0 10 chr17 13859354 13859645 -71578835 - AluSx SINE Alu -24 288 1 1159 217 42 42 chr17 13859645 13859778 -71578702 + MER58B DNA MER1_type 209 341 0 602 241 84 66 chr17 13859778 13859920 -71578560 - MLT1J2 LTR MaLR -252 194 56 2267 89 14 0 chr17 13860033 13860326 -71578154 - AluSx SINE Alu -15 297 1 201 74 0 0 chr17 13860402 13860429 -71578051 + (TG)n Simple_repeat Simple_repeat 2 28 0 585 158 110 8 chr17 13860491 13860618 -71577862 - MLT1B LTR MaLR -222 168 29 471 229 27 3 chr17 13861219 13862115 -71576365 + (TATATG)n Simple_repeat Simple_repeat 1 916 0 267 31 0 0 chr17 13862292 13862324 -71576156 + (TG)n Simple_repeat Simple_repeat 1 32 0 221 271 21 0 chr17 13862375 13862423 -71576057 - L2 LINE L2 -90 3182 3134 1127 226 5 0 chr17 13863586 13863807 -71574673 + MER58A DNA MER1_type 1 222 -2 925 232 94 3 chr17 13864622 13864919 -71573561 - MER33 DNA MER1_type 0 324 1 2333 100 0 10 chr17 13865081 13865391 -71573089 - AluSc SINE Alu -2 307 1 23 0 0 0 chr17 13865400 13865423 -71573057 + AT_rich Low_complexity Low_complexity 1 23 0 1446 131 16 0 chr17 13865423 13865668 -71572812 - L1MA2 LINE L1 0 6304 6056 512 296 31 23 chr17 13865691 13865948 -71572532 - MIR SINE MIR 0 262 4 2122 112 34 0 chr17 13866472 13866766 -71571714 - AluSc SINE Alu -5 304 1 23 68 0 0 chr17 13866971 13867015 -71571465 + AT_rich Low_complexity Low_complexity 1 44 0 280 309 83 25 chr17 13867104 13867420 -71571060 - L1ME4a LINE L1 -104 6017 5684 784 299 5 5 chr17 13867663 13867877 -71570603 + MIR SINE MIR 23 236 -26 305 271 85 65 chr17 13867940 13868413 -71570067 - L1ME4a LINE L1 -1823 4323 3842 280 286 41 67 chr17 13868697 13869085 -71569395 - L1ME4a LINE L1 -2686 3460 3083 1659 200 67 9 chr17 13869212 13869557 -71568923 - MLT1A1 LTR MaLR 0 365 1 270 56 0 0 chr17 13869647 13869683 -71568797 + (CA)n Simple_repeat Simple_repeat 1 36 0 183 238 0 24 chr17 13869843 13869885 -71568595 - MIR3 SINE MIR -24 184 144 21 0 0 0 chr17 13869887 13869908 -71568572 + AT_rich Low_complexity Low_complexity 1 21 0 412 253 235 12 chr17 13870635 13870801 -71567679 - MIR SINE MIR -3 259 57 368 353 87 71 chr17 13870963 13871652 -71566828 + L2 LINE L2 2490 3196 -76 277 311 139 7 chr17 13873835 13873986 -71564494 + MIR3 SINE MIR 31 201 -7 193 146 42 0 chr17 13874563 13874611 -71563869 + (TA)n Simple_repeat Simple_repeat 2 51 0 319 272 0 22 chr17 13874616 13874708 -71563772 + L1MC4 LINE L1 6614 6703 -1339 308 150 16 102 chr17 13874684 13874811 -71563669 - L1MC4 LINE L1 -1339 6983 1995 * 308 115 26 115 chr17 13874838 13874916 -71563564 - L1MC4 LINE L1 -4361 2065 1995 308 115 26 115 chr17 13874943 13875021 -71563459 - L1MC4 LINE L1 -4361 2065 1995 308 115 26 115 chr17 13875048 13875126 -71563354 - L1MC4 LINE L1 -4361 2065 1995 308 115 26 115 chr17 13875153 13875231 -71563249 - L1MC4 LINE L1 -4361 2065 1995 320 118 26 92 chr17 13875258 13875334 -71563146 - L1MC4 LINE L1 -4361 2065 1995 619 190 17 11 chr17 13875338 13875517 -71562963 + (TA)n Simple_repeat Simple_repeat 1 180 0 523 216 11 17 chr17 13875536 13875717 -71562763 + (TA)n Simple_repeat Simple_repeat 1 180 0 472 229 17 11 chr17 13875736 13876080 -71562400 + (TA)n Simple_repeat Simple_repeat 1 345 0 527 224 23 0 chr17 13876093 13876267 -71562213 + (TA)n Simple_repeat Simple_repeat 1 178 0 1716 106 0 21 chr17 13876267 13876502 -71561978 - AluSg/x SINE Alu -14 296 67 282 289 58 58 chr17 13876503 13876728 -71561752 - L1ME LINE L1 -422 5699 5475 865 143 0 36 chr17 13876788 13876928 -71561552 + AluJo SINE Alu 1 135 -177 2435 127 5 19 chr17 13877335 13877704 -71560776 + THE1B LTR MaLR 1 364 0 1013 194 148 26 chr17 13877865 13878169 -71560311 + MER2 DNA MER2_type 3 343 -1 239 197 13 40 chr17 13878190 13878266 -71560214 + T-rich Low_complexity Low_complexity 2 75 0 552 232 72 0 chr17 13878504 13878629 -71559851 + MIR SINE MIR 104 237 -25 684 287 141 17 chr17 13878935 13879290 -71559190 - MLT1J LTR MaLR -44 467 69 207 0 0 0 chr17 13880330 13880353 -71558127 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 182 36 0 36 chr17 13880592 13880620 -71557860 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 336 24 0 0 chr17 13882067 13882108 -71556372 + (TG)n Simple_repeat Simple_repeat 2 42 0 358 276 0 75 chr17 13882573 13882707 -71555773 + MIR SINE MIR 1 124 -84 287 298 62 56 chr17 13882733 13882911 -71555569 + MIR SINE MIR 73 251 -11 252 351 58 39 chr17 13882911 13883065 -71555415 - MIR SINE MIR -86 176 20 184 239 0 22 chr17 13883384 13883430 -71555050 + L2 LINE L2 3266 3310 -3 194 320 97 29 chr17 13884200 13884303 -71554177 + L2 LINE L2 3204 3313 0 651 177 65 0 chr17 13884331 13884455 -71554025 - AluSp/q SINE Alu -9 304 173 339 229 38 38 chr17 13884851 13884956 -71553524 - L1M4 LINE L1 -2091 4055 3951 265 231 98 92 chr17 13885503 13885676 -71552804 - MLT1H LTR MaLR 0 549 376 979 298 23 33 chr17 13886052 13886441 -71552039 + LTR16C LTR ERVL 97 481 -10 354 336 67 44 chr17 13887039 13887122 -71551358 - L2 LINE L2 -40 3273 3193 2300 103 10 68 chr17 13887122 13887289 -71551191 + THE1C LTR MaLR 1 176 -199 2013 78 4 4 chr17 13887289 13887545 -71550935 - AluY SINE Alu -1 310 55 2300 103 10 68 chr17 13887545 13887775 -71550705 + THE1C LTR MaLR 176 375 0 8194 151 36 32 chr17 13887775 13889348 -71549132 + THE1C-int LTR MaLR 1 1580 0 2473 105 21 16 chr17 13889348 13889721 -71548759 + THE1C LTR MaLR 1 375 0 354 336 67 44 chr17 13889721 13890040 -71548440 - L2 LINE L2 -119 3194 2860 368 227 18 18 chr17 13890151 13890261 -71548219 + L1ME LINE L1 5511 5620 -501 207 87 0 65 chr17 13890268 13890314 -71548166 + (TTTAA)n Simple_repeat Simple_repeat 1 43 0 1566 126 0 34 chr17 13890334 13890603 -71547877 - L1PB4 LINE L1 -24 6132 5873 759 319 133 24 chr17 13892522 13893126 -71545354 + L2 LINE L2 2578 3262 -51 2134 156 71 22 chr17 13893126 13893537 -71544943 + Tigger2a DNA MER2_type 4 434 0 759 319 133 24 chr17 13893537 13893596 -71544884 + L2 LINE L2 3262 3313 0 255 350 30 26 chr17 13893819 13893992 -71544488 - MER5A DNA MER1_type 0 189 1 525 252 15 28 chr17 13894007 13894154 -71544326 + MER5B DNA MER1_type 49 177 -1 338 304 174 0 chr17 13894163 13894301 -71544179 - MER5A DNA MER1_type 0 189 28 2784 163 125 37 chr17 13894413 13894617 -71543863 + MER39 LTR ERV1 2 187 -520 2348 107 0 3 chr17 13894617 13894926 -71543554 + AluSg SINE Alu 3 310 0 2784 163 125 37 chr17 13894926 13895370 -71543110 + MER39 LTR ERV1 187 707 0 2498 77 0 0 chr17 13895595 13895906 -71542574 + AluY SINE Alu 1 311 0 230 346 142 0 chr17 13896754 13896881 -71541599 + MIR3 SINE MIR 61 205 -3 211 150 0 25 chr17 13899196 13899236 -71539244 + (TAA)n Simple_repeat Simple_repeat 2 40 0 708 189 31 0 chr17 13899301 13899428 -71539052 + MER5A DNA MER1_type 56 186 -3 479 294 56 11 chr17 13899547 13899727 -71538753 + MIR3 SINE MIR 18 205 -3 26 30 0 0 chr17 13900194 13900227 -71538253 + AT_rich Low_complexity Low_complexity 1 33 0 411 232 249 28 chr17 13900519 13900696 -71537784 - MIR SINE MIR -39 223 8 189 268 122 12 chr17 13900704 13900786 -71537694 - MIR3 SINE MIR -36 172 82 383 213 63 63 chr17 13900821 13900835 -71537645 + MER5B DNA MER1_type 51 64 -114 1930 116 6 77 chr17 13900835 13901007 -71537473 + AluSx SINE Alu 2 142 -170 690 65 0 0 chr17 13901007 13901099 -71537381 + (TAAAA)n Simple_repeat Simple_repeat 4 95 0 1930 116 6 77 chr17 13901099 13901253 -71537227 + AluSx SINE Alu 142 305 -7 383 213 63 63 chr17 13901253 13901365 -71537115 + MER5B DNA MER1_type 63 177 -1 239 235 31 71 chr17 13901876 13901974 -71536506 + L3 LINE CR1 1223 1316 -261 219 231 31 31 chr17 13902623 13902688 -71535792 - MIR SINE MIR -65 143 79 813 157 7 59 chr17 13902711 13902864 -71535616 - AluJb SINE Alu -133 179 35 2026 141 16 0 chr17 13902892 13903197 -71535283 + AluSx SINE Alu 3 312 0 211 256 0 0 chr17 13903199 13903238 -71535242 + polypurine Low_complexity Low_complexity 4 42 0 745 208 122 28 chr17 13903377 13903665 -71534815 + MER39 LTR ERV1 393 707 0 238 284 66 25 chr17 13903686 13903883 -71534597 - L1MC5 LINE L1 -170 7791 7587 240 111 0 0 chr17 13904860 13904896 -71533584 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr17 13905029 13905051 -71533429 + AT_rich Low_complexity Low_complexity 1 22 0 1817 94 0 12 chr17 13905561 13905806 -71532674 - AluSg/x SINE Alu -2 308 67 451 286 75 53 chr17 13905890 13906208 -71532272 + Charlie8 DNA MER1_type 85 409 -2008 2334 77 0 46 chr17 13906391 13906715 -71531765 - AluSc SINE Alu 0 309 1 255 329 27 0 chr17 13906981 13907054 -71531426 + L2 LINE L2 3193 3267 -5 783 206 138 5 chr17 13907596 13907785 -71530695 - MER58A DNA MER1_type -10 214 1 200 322 22 11 chr17 13907918 13908008 -71530472 - L2 LINE L2 -8 3264 3174 212 305 58 58 chr17 13908663 13908837 -71529643 - L2 LINE L2 -221 3051 2878 302 224 153 10 chr17 13908947 13909045 -71529435 + L2 LINE L2 3155 3266 -6 601 267 11 0 chr17 13909254 13909434 -71529046 + MLT1H LTR MaLR 2 183 -366 1374 219 99 39 chr17 13909441 13909933 -71528547 - MER39 LTR ERV1 0 682 6 531 238 119 75 chr17 13909910 13910271 -71528209 + MLT1H LTR MaLR 173 549 0 * 269 136 0 0 chr17 13911246 13911290 -71527190 - L2 LINE L2 -1 3312 3269 287 302 16 24 chr17 13912685 13912815 -71525665 + MER5A DNA MER1_type 16 155 -34 2082 134 76 8 chr17 13913016 13913412 -71525068 - MSTA LTR MaLR 0 428 6 475 256 100 43 chr17 13913412 13913693 -71524787 - L2 LINE L2 -28 3285 2989 669 161 115 35 chr17 13913700 13913725 -71524755 - MER53 DNA DNA 0 189 167 1761 178 39 34 chr17 13913725 13914113 -71524367 + MLT1B LTR MaLR 1 390 0 669 161 115 35 chr17 13914113 13914261 -71524219 - MER53 DNA DNA -22 167 2 292 267 58 12 chr17 13914264 13914350 -71524130 - L2 LINE L2 -322 2991 2902 2123 189 36 5 chr17 13914377 13914822 -71523658 + MER65C LTR ERV1 1 459 -2 1813 127 0 18 chr17 13914826 13915102 -71523378 - AluSx SINE Alu 0 312 42 2454 74 0 0 chr17 13915905 13916201 -71522279 + AluY SINE Alu 1 296 -15 1937 121 0 0 chr17 13916292 13916557 -71521923 + AluSg SINE Alu 32 296 -14 24 77 0 0 chr17 13917949 13918001 -71520479 + AT_rich Low_complexity Low_complexity 1 52 0 182 125 0 50 chr17 13919665 13919705 -71518775 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 509 252 18 0 chr17 13921798 13921909 -71516571 + MER81 DNA DNA 1 113 -1 494 250 58 24 chr17 13922645 13922853 -71515627 - LTR33 LTR ERVL -2 519 305 2223 161 6 11 chr17 13923843 13924209 -71514271 - THE1B LTR MaLR 0 364 1 9290 122 36 31 chr17 13924209 13925698 -71512782 - THE1B-int LTR MaLR 0 1580 80 2524 88 48 119 chr17 13925698 13926176 -71512304 + MLT2A1 LTR ERVL 1 444 0 9290 122 36 31 chr17 13926176 13926257 -71512223 - THE1B-int LTR MaLR -1500 80 1 2535 119 6 3 chr17 13926257 13926618 -71511862 - THE1B LTR MaLR 0 364 3 599 345 72 48 chr17 13926680 13927155 -71511325 - HAL1 LINE L1 -906 1601 1116 614 287 169 35 chr17 13927415 13927812 -71510668 + LTR16A LTR ERVL 8 457 0 975 225 165 42 chr17 13928106 13928554 -71509926 - MLT1D LTR MaLR 0 505 3 2091 130 7 10 chr17 13928638 13928946 -71509534 - AluSx SINE Alu -5 307 1 3124 151 35 14 chr17 13930328 13930905 -71507575 + L1MA8 LINE L1 5698 6286 -5 1166 191 100 67 chr17 13931221 13931531 -71506949 + MER66A LTR ERV1 108 360 -118 4139 121 11 2 chr17 13931531 13932159 -71506321 + MER41B LTR ERV1 1 634 -1 1166 191 100 67 chr17 13932159 13932282 -71506198 + MER66A LTR ERV1 360 478 0 2201 130 3 0 chr17 13932366 13932673 -71505807 - AluSx SINE Alu -4 308 1 591 256 56 104 chr17 13932995 13933389 -71505091 + L2 LINE L2 2939 3313 0 21 71 0 0 chr17 13933529 13933571 -71504909 + AT_rich Low_complexity Low_complexity 1 42 0 1970 116 11 0 chr17 13933944 13934221 -71504259 + AluSx SINE Alu 1 280 -32 224 29 0 29 chr17 13934223 13934257 -71504223 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr17 13934257 13934282 -71504198 + AT_rich Low_complexity Low_complexity 1 25 0 2235 99 0 3 chr17 13934408 13934712 -71503768 - AluY SINE Alu -8 303 1 468 373 65 37 chr17 13937455 13937806 -71500674 - L2 LINE L2 -1 3271 2911 247 376 122 0 chr17 13937872 13938119 -71500361 - L2 LINE L2 -460 2854 2578 401 275 12 44 chr17 13938201 13938361 -71500119 + MIR SINE MIR 63 217 -45 1665 128 4 0 chr17 13938515 13938749 -71499731 - AluSx SINE Alu -25 287 53 2749 10 0 3 chr17 13938749 13939054 -71499426 + AluYa5 SINE Alu 1 305 -6 434 133 0 0 chr17 13939054 13939114 -71499366 - AluSx SINE Alu -250 60 1 269 240 125 48 chr17 13939673 13939777 -71498703 - MIR3 SINE MIR 0 208 97 225 276 66 0 chr17 13939984 13940060 -71498420 + MLT1H LTR MaLR 8 88 -461 3325 196 59 29 chr17 13940064 13940854 -71497626 - L1MB5 LINE L1 0 6174 5312 2330 50 40 20 chr17 13940854 13941154 -71497326 - AluY SINE Alu -5 306 1 3325 196 59 29 chr17 13941154 13941723 -71496757 - L1MB5 LINE L1 -862 5312 4761 253 289 96 24 chr17 13941759 13941925 -71496555 + MLT1H LTR MaLR 114 291 -258 440 385 27 11 chr17 13942281 13942468 -71496012 + MIR SINE MIR 39 228 -34 192 77 0 0 chr17 13942494 13942520 -71495960 + (TTG)n Simple_repeat Simple_repeat 2 27 0 475 87 87 3 chr17 13943166 13943478 -71495002 + (TA)n Simple_repeat Simple_repeat 1 338 0 486 102 72 0 chr17 13943492 13943659 -71494821 + (TA)n Simple_repeat Simple_repeat 1 179 0 333 162 37 7 chr17 13943694 13943830 -71494650 + (TA)n Simple_repeat Simple_repeat 1 140 0 2215 97 3 3 chr17 13943830 13944118 -71494362 - AluSc SINE Alu -21 288 1 1568 254 5 10 chr17 13944121 13944534 -71493946 + L1ME3A LINE L1 5582 5992 -174 1720 167 7 11 chr17 13944774 13945061 -71493419 - AluJo SINE Alu -22 290 5 189 350 52 10 chr17 13945182 13945279 -71493201 + L3 LINE CR1 1448 1548 -29 1960 145 7 0 chr17 13945279 13945568 -71492912 - AluJb SINE Alu -21 291 1 229 360 0 16 chr17 13946270 13946395 -71492085 + CT-rich Low_complexity Low_complexity 5 127 0 222 171 0 0 chr17 13947012 13947053 -71491427 + (CA)n Simple_repeat Simple_repeat 2 42 0 260 325 13 13 chr17 13947103 13947180 -71491300 - MIR SINE MIR -94 114 38 350 211 35 111 chr17 13947265 13947359 -71491121 + L1ME3A LINE L1 6009 6086 -84 1842 167 22 30 chr17 13947359 13947725 -71490755 - MLT1A1 LTR MaLR -2 363 1 350 211 35 111 chr17 13947725 13947801 -71490679 + L1ME3A LINE L1 6086 6166 -4 301 217 42 8 chr17 13947801 13947921 -71490559 + (TA)n Simple_repeat Simple_repeat 1 124 0 574 292 116 58 chr17 13948139 13948215 -71490265 + MLT1J LTR MaLR 1 71 -440 2562 47 0 0 chr17 13948215 13948513 -71489967 + AluY SINE Alu 1 298 -13 574 292 116 58 chr17 13948513 13948919 -71489561 + MLT1J LTR MaLR 71 511 0 487 350 48 21 chr17 13949294 13949480 -71489000 + MIR SINE MIR 15 205 -57 182 340 150 0 chr17 13950169 13950269 -71488211 - MIR SINE MIR -69 139 25 502 208 32 32 chr17 13950270 13950395 -71488085 - Tigger2 DNA MER2_type -38 2680 2556 2165 153 26 81 chr17 13951455 13951640 -71486840 + Tigger2a DNA MER2_type 1 195 -2513 2309 113 0 0 chr17 13951640 13951949 -71486531 - AluY SINE Alu -2 309 1 2165 153 26 81 chr17 13951949 13952222 -71486258 + Tigger2a DNA MER2_type 195 434 0 2254 200 77 35 chr17 13952514 13952584 -71485896 + L1MB5 LINE L1 5544 5610 -564 1940 161 0 0 chr17 13952584 13952875 -71485605 + AluSx SINE Alu 5 295 -17 2254 200 77 35 chr17 13952875 13953404 -71485076 + L1MB5 LINE L1 5610 6168 -6 244 309 24 63 chr17 13954501 13954627 -71483853 + L2 LINE L2 2926 3046 -226 571 186 68 114 chr17 13954732 13954952 -71483528 - MER58C DNA MER1_type 0 215 6 423 0 0 0 chr17 13955154 13955201 -71483279 + (CA)n Simple_repeat Simple_repeat 1 47 0 1013 109 32 4 chr17 13955337 13955584 -71482896 + CT-rich Low_complexity Low_complexity 1 254 0 237 369 0 0 chr17 13956502 13956586 -71481894 - MIR3 SINE MIR -35 173 90 224 341 33 11 chr17 13956870 13956961 -71481519 + MIR SINE MIR 22 114 -148 259 291 126 31 chr17 13956994 13957121 -71481359 + MIR SINE MIR 106 244 -18 227 235 86 25 chr17 13957616 13957697 -71480783 - MIR SINE MIR -54 208 123 14625 135 106 7 chr17 13958650 13961921 -71476559 + L1PBa LINE L1 5 3601 -3261 1646 213 50 2 chr17 13961921 13962358 -71476122 - L1 LINE L1 -1362 4784 4327 4799 247 61 43 chr17 13962367 13962520 -71475960 + L1MCa LINE L1 2062 2211 -4215 596 133 0 0 chr17 13962520 13962625 -71475855 + L1MA9 LINE L1 6207 6311 -1 4799 247 61 43 chr17 13962625 13962775 -71475705 + L1MCa LINE L1 2211 2357 -4069 2450 78 3 3 chr17 13962775 13963083 -71475397 + AluY SINE Alu 1 308 -3 4799 247 61 43 chr17 13963083 13965193 -71473287 + L1MCa LINE L1 2357 4580 -1846 1033 215 5 0 chr17 13965208 13965408 -71473072 + MER82 DNA MER2_type 2 202 -451 1340 239 152 18 chr17 13965720 13966114 -71472366 + MER82 DNA MER2_type 206 652 -1 1665 244 61 48 chr17 13966115 13966787 -71471693 + L1MCa LINE L1 4593 5273 -1153 588 296 78 50 chr17 13966894 13967292 -71471188 - MARNA DNA Mariner -29 557 149 246 322 222 0 chr17 13967340 13967511 -71470969 - MIR SINE MIR -19 243 35 816 203 70 0 chr17 13967885 13968043 -71470437 + MER82 DNA MER2_type 1 169 -484 1477 169 0 24 chr17 13968061 13968191 -71470289 + Tigger2a DNA MER2_type 2 134 -2574 2062 95 40 0 chr17 13968191 13968487 -71469993 - AluSp SINE Alu -5 308 1 1477 169 0 24 chr17 13968487 13968723 -71469757 + Tigger2a DNA MER2_type 134 434 0 1253 164 99 34 chr17 13968723 13968832 -71469648 + MER82 DNA MER2_type 199 299 -354 2563 47 3 0 chr17 13968832 13969133 -71469347 + AluY SINE Alu 3 304 -7 1253 164 99 34 chr17 13969133 13969192 -71469288 + MER82 DNA MER2_type 299 353 -300 1981 143 48 38 chr17 13969192 13969563 -71468917 + THE1C LTR MaLR 1 375 0 1253 164 99 34 chr17 13969563 13969654 -71468826 + MER82 DNA MER2_type 353 476 -177 183 80 0 0 chr17 13970417 13970442 -71468038 + (CA)n Simple_repeat Simple_repeat 2 26 0 316 293 100 41 chr17 13970581 13971291 -71467189 + L1MC/D LINE L1 2386 3137 -3009 23 86 0 0 chr17 13971303 13971361 -71467119 + AT_rich Low_complexity Low_complexity 1 58 0 1247 77 0 0 chr17 13971371 13971527 -71466953 - AluY SINE Alu -4 307 152 975 289 82 13 chr17 13971694 13972157 -71466323 + L1MC/D LINE L1 5264 5758 -2050 2429 65 0 0 chr17 13972212 13972504 -71465976 - AluSx SINE Alu -17 295 4 255 305 34 51 chr17 13973390 13973508 -71464972 + MIR SINE MIR 3 118 -144 2099 150 40 29 chr17 13973601 13973981 -71464499 + L1MA7 LINE L1 5902 6285 -6 2116 113 3 10 chr17 13974071 13974371 -71464109 + AluSx SINE Alu 1 298 -14 2413 78 0 7 chr17 13974932 13975240 -71463240 - AluY SINE Alu -5 306 1 2467 84 0 13 chr17 13975686 13975997 -71462483 + AluY SINE Alu 1 307 -4 1240 213 65 76 chr17 13976051 13976072 -71462408 - MLT2C2 LTR ERVL -9 455 435 180 0 0 0 chr17 13976072 13976092 -71462388 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1240 213 65 76 chr17 13976092 13976530 -71461950 - MLT2C2 LTR ERVL -29 435 1 267 221 12 58 chr17 13977109 13977190 -71461290 - L2 LINE L2 -1061 2253 2177 310 376 67 18 chr17 13977190 13977355 -71461125 - MER5B DNA MER1_type 0 178 6 588 299 197 13 chr17 13977448 13977839 -71460641 - L2 LINE L2 -1292 2022 1560 2241 118 0 3 chr17 13977855 13978161 -71460319 + AluSg SINE Alu 1 305 -5 2398 72 0 3 chr17 13978325 13978616 -71459864 + AluSg1 SINE Alu 1 290 -19 2529 240 20 30 chr17 13978791 13979350 -71459130 - MLT2B3 LTR ERVL 0 554 2 22 88 0 0 chr17 13979471 13979528 -71458952 + AT_rich Low_complexity Low_complexity 1 57 0 23 0 0 0 chr17 13979576 13979599 -71458881 + AT_rich Low_complexity Low_complexity 1 23 0 315 355 149 12 chr17 13980107 13980607 -71457873 + L2 LINE L2 2688 3266 -47 1348 208 10 31 chr17 13980812 13981105 -71457375 - AluJo SINE Alu -25 287 1 1093 171 0 18 chr17 13981242 13981412 -71457068 + FAM SINE Alu 1 167 -8 2276 115 0 10 chr17 13981526 13981840 -71456640 - AluY SINE Alu 0 311 1 363 164 0 16 chr17 13982777 13982838 -71455642 + AluJ/FRAM SINE Alu 233 292 -10 194 366 183 0 chr17 13982978 13983071 -71455409 - L2 LINE L2 -2 3270 3161 744 333 50 36 chr17 13983159 13983600 -71454880 - L2 LINE L2 -4 3309 2863 1346 178 99 14 chr17 13983616 13983909 -71454571 - MLT1C LTR MaLR -5 462 145 979 353 73 24 chr17 13983918 13984578 -71453902 - L2 LINE L2 -501 2813 2122 1213 151 31 62 chr17 13984820 13985045 -71453435 - MER20 DNA MER1_type -1 218 1 239 167 198 4 chr17 13986176 13986262 -71452218 - MLT1G1 LTR MaLR 0 590 501 787 356 17 34 chr17 13986302 13986653 -71451827 - MLT1G1 LTR MaLR -175 420 76 5566 58 8 0 chr17 13987012 13987667 -71450813 - L1PA8 LINE L1 -2 6170 5511 2415 69 7 0 chr17 13988633 13988922 -71449558 - AluSc SINE Alu -17 292 2 2168 196 21 128 chr17 13989257 13989921 -71448559 + MLT1E LTR MaLR 1 593 0 2277 112 3 0 chr17 13990088 13990383 -71448097 + AluSp SINE Alu 1 296 -17 196 367 40 7 chr17 13990628 13990778 -71447702 - MIR3 SINE MIR 0 208 54 223 324 98 0 chr17 13990786 13990888 -71447592 - MIR SINE MIR -11 251 140 2168 112 0 0 chr17 13991215 13991501 -71446979 - AluSg SINE Alu -12 298 13 658 173 54 54 chr17 13991620 13991788 -71446692 - MLT1H LTR MaLR 0 549 382 1674 277 9 18 chr17 13991815 13992262 -71446218 + MLT1E2 LTR MaLR 1 443 -183 1871 200 50 74 chr17 13992412 13992497 -71445983 + MLT1D LTR MaLR 3 88 -417 2337 107 0 0 chr17 13992497 13992796 -71445684 + AluSc SINE Alu 1 299 -10 1871 200 50 74 chr17 13992796 13993225 -71445255 + MLT1D LTR MaLR 88 505 0 491 188 80 36 chr17 13993425 13993563 -71444917 - MLT1H LTR MaLR -394 155 12 286 282 106 12 chr17 13993978 13994063 -71444417 - MIR SINE MIR -67 141 49 731 298 113 73 chr17 13994137 13994327 -71444153 + MLT1L LTR MaLR 8 189 -426 2366 164 55 26 chr17 13994327 13994749 -71443731 + Tigger2a DNA MER2_type 1 434 0 731 298 113 73 chr17 13994749 13994770 -71443710 + MLT1L LTR MaLR 189 208 -407 707 280 54 0 chr17 13994770 13994938 -71443542 + MER45A DNA AcHobo 1 177 -1 731 298 113 73 chr17 13994938 13995276 -71443204 + MLT1L LTR MaLR 208 580 -35 254 324 83 0 chr17 13995311 13995419 -71443061 + MIR SINE MIR 75 191 -71 2626 139 21 32 chr17 13995437 13995870 -71442610 - MSTA LTR MaLR 0 428 1 2626 217 107 49 chr17 13996315 13996509 -71441971 + L1MDa LINE L1 18 199 -6341 2270 81 35 0 chr17 13996509 13996793 -71441687 - AluSc SINE Alu -15 294 1 2626 217 107 49 chr17 13996793 13997388 -71441092 + L1MDa LINE L1 199 758 -5782 2072 102 0 68 chr17 13997388 13997711 -71440769 + AluSc SINE Alu 1 301 -8 2626 217 107 49 chr17 13997711 13998232 -71440248 + L1MDa LINE L1 758 1561 -4979 2328 81 0 3 chr17 13998237 13998534 -71439946 + AluY SINE Alu 1 296 -15 275 256 116 0 chr17 13998598 13998684 -71439796 + MER5A DNA MER1_type 7 102 -87 907 147 0 0 chr17 13998710 13998839 -71439641 + FLAM_C SINE Alu 1 129 -4 198 0 0 0 chr17 14000163 14000185 -71438295 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2190 67 0 0 chr17 14000527 14000794 -71437686 + AluY SINE Alu 39 305 -6 377 339 73 17 chr17 14000907 14001084 -71437396 + L2 LINE L2 2857 3043 -229 2107 84 84 0 chr17 14001151 14001435 -71437045 + AluSp SINE Alu 1 308 -5 357 276 0 13 chr17 14001608 14001684 -71436796 + L2 LINE L2 3196 3270 -2 1837 133 37 4 chr17 14001693 14001964 -71436516 + AluSx SINE Alu 1 280 -32 470 247 100 27 chr17 14002667 14002817 -71435663 + MIR SINE MIR 81 241 -21 198 214 0 114 chr17 14002831 14002901 -71435579 - L2 LINE L2 -5 3267 3206 772 286 78 27 chr17 14003165 14003535 -71434945 - L2 LINE L2 -542 2772 2384 496 286 71 16 chr17 14004800 14004982 -71433498 + MIR3 SINE MIR 3 194 -14 814 307 73 16 chr17 14006666 14007050 -71431430 - L1ME3A LINE L1 -1239 4907 4502 1219 256 86 66 chr17 14007058 14008243 -71430237 + L1ME3A LINE L1 4929 6162 -2 2708 199 12 4 chr17 14008329 14008841 -71429639 + MER34 LTR ERV1 27 542 0 1510 178 42 11 chr17 14010029 14010316 -71428164 - L1MC1 LINE L1 0 6333 6038 21 36 0 0 chr17 14010328 14010356 -71428124 + AT_rich Low_complexity Low_complexity 1 28 0 551 286 98 54 chr17 14010640 14010955 -71427525 + MLT1I LTR MaLR 81 409 0 405 244 38 38 chr17 14010990 14011121 -71427359 - L1 LINE L1 -1530 4616 4486 307 304 47 52 chr17 14011221 14011412 -71427068 - L1 LINE L1 -1845 4301 4112 695 241 14 0 chr17 14011449 14011594 -71426886 - MER58B DNA MER1_type 0 341 195 2250 113 0 7 chr17 14011892 14012201 -71426279 - AluSx SINE Alu -5 307 1 823 280 92 48 chr17 14012225 14012618 -71425862 - L2 LINE L2 -5 3308 2899 2270 204 105 11 chr17 14012687 14013119 -71425361 + MLT2B1 LTR ERVL 1 483 -37 255 61 0 0 chr17 14013119 14013152 -71425328 + (CA)n Simple_repeat Simple_repeat 2 34 0 2270 204 105 11 chr17 14013152 14013194 -71425286 + MLT2B1 LTR ERVL 483 520 0 1206 227 64 72 chr17 14013691 14014232 -71424248 - MER39 LTR ERV1 0 707 8 612 238 176 33 chr17 14014455 14014757 -71423723 + L2 LINE L2 2930 3274 -39 281 257 110 9 chr17 14014750 14014859 -71423621 + L2 LINE L2 3150 3269 -3 * 35212 72 14 10 chr17 14014941 14021042 -71417438 + L1PA5 LINE L1 11 6145 -9 531 178 11 0 chr17 14021042 14021132 -71417348 - MER58B DNA MER1_type -250 91 1 243 147 59 29 chr17 14021132 14021200 -71417280 - L1MEc LINE L1 -4121 2275 2206 37 0 0 0 chr17 14021200 14021237 -71417243 + AT_rich Low_complexity Low_complexity 1 37 0 334 314 46 27 chr17 14021468 14021789 -71416691 - L1MDa LINE L1 -3769 2771 2483 1518 195 51 43 chr17 14021800 14022170 -71416310 - MLT1A2 LTR MaLR -1 373 1 404 179 179 19 chr17 14022580 14022686 -71415794 - MER63 DNA MER1_type -313 749 1 207 100 0 0 chr17 14022708 14022738 -71415742 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 194 377 0 0 chr17 14023538 14023615 -71414865 - L2 LINE L2 -553 2761 2685 601 270 48 59 chr17 14025298 14025388 -71413092 + LTR16A LTR ERVL 88 177 -273 812 201 32 37 chr17 14025388 14025577 -71412903 - MER53 DNA DNA -1 188 1 601 270 48 59 chr17 14025577 14025756 -71412724 + LTR16A LTR ERVL 177 354 -96 786 292 135 24 chr17 14026004 14026559 -71411921 + L1ME4a LINE L1 5323 5947 -174 21 0 0 0 chr17 14026565 14026586 -71411894 + AT_rich Low_complexity Low_complexity 1 21 0 714 267 11 6 chr17 14027282 14027458 -71411022 - MER5B DNA MER1_type -1 177 1 500 269 50 31 chr17 14028100 14028288 -71410192 + MIR SINE MIR 16 204 -58 26 0 0 0 chr17 14028288 14028314 -71410166 + AT_rich Low_complexity Low_complexity 1 26 0 614 91 45 23 chr17 14028314 14028490 -71409990 + (TA)n Simple_repeat Simple_repeat 1 180 0 584 262 63 74 chr17 14029297 14029648 -71408832 + L2 LINE L2 1577 1923 -1391 1362 287 137 33 chr17 14029992 14030468 -71408012 - Zaphod DNA AcHobo -3370 661 236 2094 49 38 4 chr17 14030468 14030731 -71407749 - AluY SINE Alu -1 310 39 1362 287 137 33 chr17 14030731 14030794 -71407686 - Zaphod DNA AcHobo -3795 236 181 604 208 286 28 chr17 14030794 14030972 -71407508 - MER58A DNA MER1_type 0 224 1 1362 287 137 33 chr17 14030972 14031030 -71407450 - Zaphod DNA AcHobo -3850 181 1 462 354 52 31 chr17 14031056 14031347 -71407133 + L2 LINE L2 2510 2806 -508 300 278 67 67 chr17 14031790 14031954 -71406526 + L3 LINE CR1 1214 1380 -197 1981 132 0 10 chr17 14031954 14032249 -71406231 + AluSc SINE Alu 1 292 -17 300 278 67 67 chr17 14032249 14032293 -71406187 + L3 LINE CR1 1379 1422 -155 1048 200 69 103 chr17 14032534 14032668 -71405812 + MLT1C LTR MaLR 1 138 -329 2000 115 11 0 chr17 14032668 14032947 -71405533 + AluSx SINE Alu 21 302 -10 1048 200 69 103 chr17 14032947 14033172 -71405308 + MLT1C LTR MaLR 138 348 -119 2142 166 23 43 chr17 14033178 14033576 -71404904 + MLT1B LTR MaLR 1 390 0 688 319 11 7 chr17 14033641 14033911 -71404569 - L1ME3A LINE L1 -208 5962 5692 246 363 35 18 chr17 14034115 14034228 -71404252 - L2 LINE L2 -11 3261 3147 180 331 66 37 chr17 14034630 14034766 -71403714 + L3 LINE CR1 1413 1552 -25 2186 92 0 60 chr17 14035337 14035653 -71402827 - AluSg SINE Alu -13 297 1 294 319 14 35 chr17 14035883 14036027 -71402453 + MIR SINE MIR 4 144 -118 332 316 53 9 chr17 14036191 14036305 -71402175 + MER5A DNA MER1_type 63 181 -8 366 264 70 87 chr17 14037954 14038196 -71400284 + MLT1L LTR MaLR 157 394 -221 532 279 0 7 chr17 14038241 14038381 -71400099 + MLT1L LTR MaLR 477 615 0 2420 80 0 0 chr17 14038585 14038884 -71399596 + AluSc SINE Alu 1 299 -10 367 247 11 3 chr17 14039290 14039383 -71399097 + MER5A DNA MER1_type 3 109 -80 455 129 71 0 chr17 14039759 14039844 -71398636 + AluY SINE Alu 218 308 -3 12067 161 15 28 chr17 14039844 14040288 -71398192 + L1P LINE L1 2591 3039 -3107 2229 100 0 0 chr17 14040288 14040609 -71397871 - AluSc SINE Alu 0 321 1 12067 161 15 28 chr17 14040609 14042419 -71396061 + L1P LINE L1 3039 4818 -1328 887 272 45 47 chr17 14042522 14042992 -71395488 + HAL1b LINE L1 74 542 -806 186 71 0 0 chr17 14043306 14043334 -71395146 + (CA)n Simple_repeat Simple_repeat 1 28 0 2325 93 7 3 chr17 14043511 14043812 -71394668 - AluSc SINE Alu -7 302 1 921 206 51 55 chr17 14044399 14044430 -71394050 + MIR SINE MIR 8 38 -224 2555 65 0 0 chr17 14044430 14044738 -71393742 + AluY SINE Alu 4 311 0 921 206 51 55 chr17 14044738 14044959 -71393521 + MIR SINE MIR 38 259 -3 345 333 15 15 chr17 14047960 14048095 -71390385 + MER5A DNA MER1_type 27 161 -28 186 43 0 0 chr17 14048775 14048798 -71389682 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1431 161 83 12 chr17 14048803 14048940 -71389540 - AluJb SINE Alu -40 272 146 264 59 0 0 chr17 14048940 14048974 -71389506 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 1431 161 83 12 chr17 14048974 14049090 -71389390 - AluJb SINE Alu -166 146 1 1268 193 55 29 chr17 14049368 14049643 -71388837 - AluJo SINE Alu -30 282 1 2096 208 28 63 chr17 14050190 14050880 -71387600 + L1MC/D LINE L1 5146 5818 -743 1831 263 10 14 chr17 14050875 14051380 -71387100 + L1ME1 LINE L1 22 524 -5872 * 1131 203 35 61 chr17 14051377 14051752 -71386728 - L1MEc LINE L1 -4126 2270 1906 * 710 202 86 34 chr17 14051749 14052016 -71386464 - L1M4 LINE L1 -1556 4590 4310 * 254 203 29 29 chr17 14052015 14052084 -71386396 - L1M4 LINE L1 -1556 4590 4522 * 1085 263 48 0 chr17 14052083 14052395 -71386085 - L1MEc LINE L1 -4492 1904 1578 4577 227 66 28 chr17 14052404 14054586 -71383894 + L1ME1 LINE L1 3968 6230 -5 684 249 27 27 chr17 14054598 14054823 -71383657 + L1ME1 LINE L1 5813 6037 -129 694 262 110 4 chr17 14054849 14055086 -71383394 + L1MC/D LINE L1 5555 5816 -1992 1114 215 72 54 chr17 14055235 14055570 -71382910 + MER2 DNA MER2_type 2 342 -2 333 47 0 0 chr17 14056515 14056558 -71381922 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2204 83 0 4 chr17 14056563 14056839 -71381641 - AluSc SINE Alu -34 275 1 235 319 43 69 chr17 14057028 14057144 -71381336 + L2 LINE L2 3138 3250 -22 1326 213 211 38 chr17 14057453 14057899 -71380581 + L1ME3A LINE L1 5422 5789 -381 1832 164 0 3 chr17 14057899 14058186 -71380294 + AluJo SINE Alu 7 292 -20 1326 213 211 38 chr17 14058186 14058356 -71380124 + L1ME3A LINE L1 5789 6169 -1 336 278 165 0 chr17 14058657 14058790 -71379690 + MER5A DNA MER1_type 1 155 -34 2676 187 10 55 chr17 14058791 14059373 -71379107 + MER74A LTR ERVL 3 558 0 2212 123 0 0 chr17 14059377 14059677 -71378803 + AluSg SINE Alu 1 300 -10 1795 167 0 14 chr17 14060148 14060442 -71378038 + AluJo SINE Alu 1 290 -22 2202 116 3 7 chr17 14060837 14061138 -71377342 + AluSx SINE Alu 1 300 -12 2180 132 3 0 chr17 14061272 14061582 -71376898 + AluSx SINE Alu 1 311 -1 229 341 154 10 chr17 14061592 14061800 -71376680 - MIR SINE MIR -12 250 13 1327 212 72 80 chr17 14062057 14062447 -71376033 + LTR26E LTR ERV1 1 456 -166 2430 76 7 0 chr17 14062447 14062751 -71375729 + AluSc SINE Alu 1 306 -3 1327 212 72 80 chr17 14062751 14062917 -71375563 + LTR26E LTR ERV1 456 622 0 261 172 52 0 chr17 14063711 14063769 -71374711 + L2 LINE L2 2995 3055 -217 1667 93 0 0 chr17 14063788 14064002 -71374478 - AluSc SINE Alu -5 304 91 2254 107 0 38 chr17 14064737 14065056 -71373424 - AluSx SINE Alu -5 307 1 413 273 27 27 chr17 14065787 14065937 -71372543 + MER103 DNA DNA 2 151 -15 2295 90 0 0 chr17 14066100 14066414 -71372066 + AluY SINE Alu 1 311 0 244 250 25 150 chr17 14066462 14066622 -71371858 + MIR SINE MIR 28 167 -95 655 303 48 20 chr17 14066633 14066884 -71371596 - MIR SINE MIR 0 262 5 577 276 126 20 chr17 14066888 14067087 -71371393 - L2 LINE L2 0 3313 3094 1899 215 11 23 chr17 14067472 14068051 -71370429 + L1MB8 LINE L1 5092 5666 -518 1648 190 13 10 chr17 14068051 14068362 -71370118 + AluJo SINE Alu 1 312 0 21 36 0 0 chr17 14068374 14068402 -71370078 + AT_rich Low_complexity Low_complexity 1 28 0 2366 125 15 7 chr17 14068448 14068464 -71370016 + THE1A LTR MaLR 1 15 -340 2419 107 56 3 chr17 14068464 14068801 -71369679 + THE1A LTR MaLR 1 355 0 11938 102 23 0 chr17 14068801 14070345 -71368135 + THE1A-int LTR MaLR 1 1580 0 2366 125 15 7 chr17 14070345 14070690 -71367790 + THE1A LTR MaLR 14 348 -7 1560 181 0 21 chr17 14070690 14070972 -71367508 + AluJo SINE Alu 26 301 -11 673 179 65 16 chr17 14070988 14071111 -71367369 + FLAM_C SINE Alu 2 130 -13 1882 194 71 26 chr17 14071112 14071565 -71366915 + L1MB8 LINE L1 5669 6141 -37 3888 129 14 21 chr17 14071565 14072061 -71366419 + MER39B LTR ERV1 1 494 -159 2334 79 0 13 chr17 14072061 14072365 -71366115 + AluY SINE Alu 1 300 -11 3888 129 14 21 chr17 14072365 14072490 -71365990 + MER39B LTR ERV1 494 618 -35 2631 111 19 11 chr17 14072499 14072859 -71365621 + THE1B LTR MaLR 1 363 -1 264 65 0 43 chr17 14072859 14072896 -71365584 + L1MB8 LINE L1 6142 6178 0 679 78 0 0 chr17 14072958 14073048 -71365432 + L1MA8 LINE L1 6002 6091 -200 3162 106 38 100 chr17 14073048 14073374 -71365106 + MER4B LTR ERV1 1 273 -337 2347 76 7 0 chr17 14073374 14073662 -71364818 - AluSq SINE Alu -23 290 1 3162 106 38 100 chr17 14073662 14073947 -71364533 + MER4B LTR ERV1 273 574 -36 1093 135 26 0 chr17 14073971 14074164 -71364316 + L1MA8 LINE L1 6082 6279 -12 1956 170 63 35 chr17 14074171 14074600 -71363880 + LTR56 LTR ERV1 5 445 0 1885 168 128 97 chr17 14074630 14075206 -71363274 + LTR49 LTR ERV1 2 595 0 301 253 13 0 chr17 14075208 14075283 -71363197 + L1ME LINE L1 5473 5548 -618 304 238 67 9 chr17 14075290 14075395 -71363085 - MER113 DNA MER1_type? -405 116 6 273 249 65 77 chr17 14075526 14075695 -71362785 - MIR SINE MIR 0 262 96 2526 62 0 10 chr17 14076110 14076416 -71362064 - AluY SINE Alu -8 303 1 1895 201 62 28 chr17 14076451 14076888 -71361592 + LTR2B LTR ERV1 32 483 -7 378 61 0 0 chr17 14077592 14077641 -71360839 + (CA)n Simple_repeat Simple_repeat 2 50 0 205 316 176 0 chr17 14077999 14078135 -71360345 - MIR SINE MIR -31 231 72 615 280 57 0 chr17 14078144 14078301 -71360179 - MER63A DNA MER1_type -29 181 16 4358 146 15 14 chr17 14078318 14078601 -71359879 + MER50 LTR ERV1 1 282 -452 2180 139 124 21 chr17 14078601 14078989 -71359491 + MSTA LTR MaLR 1 428 0 4358 146 15 14 chr17 14078989 14079426 -71359054 + MER50 LTR ERV1 282 722 -12 482 191 22 52 chr17 14079642 14079778 -71358702 + MER113 DNA MER1_type? 14 145 -376 3468 173 17 3 chr17 14079892 14080481 -71357999 - LTR59 LTR ERV1 0 597 1 2854 202 42 78 chr17 14080485 14081272 -71357208 - LTR59-int LTR ERV1 -5 6753 5995 4446 170 21 33 chr17 14081273 14082067 -71356413 + LTR1 LTR ERV1 1 785 0 1582 202 56 24 chr17 14082067 14082558 -71355922 + HUERS-P2 LTR ERV1 1 572 -2516 25710 164 15 15 chr17 14082596 14087719 -71350761 + HUERS-P2 LTR ERV1 540 5869 -425 467 203 0 0 chr17 14087718 14087815 -71350665 - LTR49-int LTR ERV1 -3222 2724 851 * 1926 99 65 41 chr17 14087822 14088008 -71350472 - AluSx SINE Alu -12 300 103 2053 174 50 21 chr17 14088008 14088445 -71350035 - LTR7 LTR ERV1 0 450 1 1926 99 65 41 chr17 14088445 14088551 -71349929 - AluSx SINE Alu -209 103 1 1737 207 75 44 chr17 14088553 14089070 -71349410 - LTR49-int LTR ERV1 -4050 2281 1670 394 170 10 10 chr17 14089087 14089187 -71349293 + (TA)n Simple_repeat Simple_repeat 1 100 0 1624 168 73 75 chr17 14089198 14089762 -71348718 - LTR49-int LTR ERV1 -4681 1650 886 203 399 101 0 chr17 14089864 14090012 -71348468 - L3 LINE CR1 -1193 384 222 321 26 0 0 chr17 14090085 14090123 -71348357 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 232 85 37 chr17 14090185 14090267 -71348213 - MIR SINE MIR -69 193 108 889 264 109 81 chr17 14090473 14091067 -71347413 + MLT1L LTR MaLR 1 611 -4 1068 176 11 5 chr17 14091270 14091457 -71347023 + MER5A DNA MER1_type 1 188 -1 201 235 123 25 chr17 14092419 14092500 -71345980 + MIR SINE MIR 118 206 -56 2220 116 0 7 chr17 14092658 14092961 -71345519 - AluSq SINE Alu -12 301 1 258 279 74 74 chr17 14093173 14093417 -71345063 - L2 LINE L2 -212 3060 2817 1661 263 63 30 chr17 14095314 14096082 -71342398 + L1MDb LINE L1 775 1538 -4868 2172 112 3 23 chr17 14096082 14096386 -71342094 + AluSx SINE Alu 1 298 -14 1661 263 63 30 chr17 14096386 14096477 -71342003 + L1MDb LINE L1 1538 1624 -4782 1433 202 52 14 chr17 14096530 14096843 -71341637 + AluJo SINE Alu 13 312 0 2625 255 102 22 chr17 14097189 14098168 -71340312 + L1MDb LINE L1 1733 2632 -3774 4700 149 34 18 chr17 14098168 14098940 -71339540 + LTR1 LTR ERV1 2 785 0 2625 255 102 22 chr17 14098940 14099684 -71338796 + L1MDb LINE L1 2632 3591 -2815 988 300 72 22 chr17 14099808 14100208 -71338272 - MLT1J LTR MaLR -91 420 1 888 201 66 105 chr17 14100635 14101058 -71337422 - MER66A LTR ERV1 -143 435 97 287 230 11 11 chr17 14101058 14101145 -71337335 + L2 LINE L2 2473 2559 -755 1224 181 31 44 chr17 14101235 14101462 -71337018 - MER58A DNA MER1_type 0 224 1 448 336 47 44 chr17 14102025 14102299 -71336181 + Charlie8 DNA MER1_type 2 276 -2141 264 119 24 0 chr17 14102469 14102511 -71335969 + Charlie8 DNA MER1_type 1376 1418 -999 252 373 63 16 chr17 14102522 14102648 -71335832 + MIR SINE MIR 16 147 -61 2125 182 3 42 chr17 14104211 14104591 -71333889 + MLT1A1 LTR MaLR 1 365 0 342 309 117 40 chr17 14105044 14105267 -71333213 + MIR SINE MIR 23 262 0 315 267 100 87 chr17 14105313 14105429 -71333051 + MER5B DNA MER1_type 2 122 -56 378 61 0 0 chr17 14105429 14105478 -71333002 + (TG)n Simple_repeat Simple_repeat 2 50 0 315 267 100 87 chr17 14105478 14105511 -71332969 + MER5B DNA MER1_type 122 153 -25 386 339 51 57 chr17 14106171 14106284 -71332196 - MER5B DNA MER1_type -2 176 63 2284 104 0 0 chr17 14106284 14106581 -71331899 - AluSg SINE Alu -13 297 1 386 339 51 57 chr17 14106581 14106644 -71331836 - MER5B DNA MER1_type -115 63 1 374 206 32 2 chr17 14106771 14106919 -71331561 - MER53 DNA DNA 0 189 5 740 317 39 12 chr17 14107034 14107378 -71331102 + MLT1K LTR MaLR 59 439 -149 1632 168 104 43 chr17 14107388 14107561 -71330919 + L1 LINE L1 4920 5081 -1065 1988 152 3 22 chr17 14107561 14107876 -71330604 - AluSx SINE Alu -3 309 1 1632 168 104 43 chr17 14107876 14108078 -71330402 + L1 LINE L1 5081 5318 -828 430 223 58 43 chr17 14108078 14108217 -71330263 + MLT1K LTR MaLR 448 588 0 220 297 125 0 chr17 14108471 14108535 -71329945 + L2 LINE L2 3196 3267 -5 231 307 179 21 chr17 14110096 14110236 -71328244 - L3 LINE CR1 -1 1576 1415 832 224 33 0 chr17 14110260 14110412 -71328068 + FRAM SINE Alu 1 156 -20 406 298 63 58 chr17 14110437 14110642 -71327838 - L3 LINE CR1 -178 1399 1194 2038 82 14 25 chr17 14110921 14111202 -71327278 + AluSx SINE Alu 1 278 -34 317 215 49 0 chr17 14112602 14112746 -71325734 + (TA)n Simple_repeat Simple_repeat 2 152 0 22 0 0 0 chr17 14112768 14112790 -71325690 + AT_rich Low_complexity Low_complexity 1 22 0 198 277 0 46 chr17 14112889 14112954 -71325526 + L2 LINE L2 3244 3305 -8 207 100 0 100 chr17 14113937 14113987 -71324493 + L2 LINE L2 3269 3313 0 234 243 7 143 chr17 14113990 14114130 -71324350 + L3 LINE CR1 1146 1266 -311 573 250 51 6 chr17 14114130 14114306 -71324174 + MER96B DNA MER1_type? 232 415 -2 3018 85 0 5 chr17 14114612 14114999 -71323481 + MLT2A1 LTR ERVL 1 385 -59 974 130 16 120 chr17 14115009 14115254 -71323226 + MLT1B LTR MaLR 177 388 -2 2061 134 3 7 chr17 14115862 14116169 -71322311 + AluSg SINE Alu 1 306 -4 516 291 32 13 chr17 14117281 14117439 -71321041 + MIR SINE MIR 5 165 -97 218 350 97 0 chr17 14117546 14117649 -71320831 + MIR SINE MIR 34 146 -116 320 252 246 29 chr17 14118463 14118804 -71319676 - L1ME4a LINE L1 0 6121 5707 316 312 58 33 chr17 14118946 14119266 -71319214 - L1ME4a LINE L1 -681 5440 5255 949 295 44 33 chr17 14119546 14120084 -71318396 - L1MC4a LINE L1 -297 5824 5441 212 271 71 0 chr17 14120290 14120375 -71318105 - MER5C DNA MER1_type -1 323 233 322 233 47 0 chr17 14120401 14120487 -71317993 - MER5C DNA MER1_type -200 124 35 2118 113 17 7 chr17 14121041 14121333 -71317147 + AluSx SINE Alu 3 297 -15 701 105 0 76 chr17 14121341 14121446 -71317034 + (GGAA)n Simple_repeat Simple_repeat 3 93 -67 2095 125 0 0 chr17 14121446 14121897 -71316583 + AluSg SINE Alu 1 451 0 701 105 0 76 chr17 14121897 14121961 -71316519 + (GGAA)n Simple_repeat Simple_repeat 93 160 0 334 362 14 50 chr17 14122707 14122852 -71315628 + HAL1 LINE L1 386 522 -1985 1056 224 23 0 chr17 14122852 14123071 -71315409 - MER58A DNA MER1_type 0 224 1 334 362 14 50 chr17 14123071 14123143 -71315337 + HAL1 LINE L1 522 595 -1912 392 297 34 71 chr17 14123302 14123625 -71314855 - L1 LINE L1 -2679 3467 3157 291 304 156 56 chr17 14123642 14124053 -71314427 - L2 LINE L2 -1071 2243 1792 261 242 58 58 chr17 14124764 14124884 -71313596 - LTR28 LTR ERV1 -1 1019 900 526 260 109 71 chr17 14124980 14125419 -71313061 - LTR1B LTR ERV1 -328 498 43 2925 177 35 3 chr17 14125442 14126012 -71312468 - HUERS-P2 LTR ERV1 0 3088 2467 * 3588 213 25 25 chr17 14126011 14126777 -71311703 - HUERS-P2 LTR ERV1 -1707 1381 616 516 194 14 76 chr17 14126748 14126892 -71311588 - HUERS-P2 LTR ERV1 -2952 136 2 * 866 237 120 60 chr17 14127098 14127552 -71310928 - LTR1B LTR ERV1 -38 1240 39 225 131 49 0 chr17 14127771 14127832 -71310648 + L1MCa LINE L1 2005 2068 -4358 403 244 0 21 chr17 14128909 14129010 -71309470 + MER51-int LTR ERV1 154 271 -4640 2335 110 49 9 chr17 14129471 14130002 -71308478 + MER51A LTR ERV1 2 625 -9 1316 149 39 71 chr17 14130036 14130317 -71308163 + MER51A-int LTR ERV1 1 272 -7544 1272 206 24 65 chr17 14130330 14130670 -71307810 + MER51A-int LTR ERV1 247 572 -7244 440 210 0 65 chr17 14130687 14130811 -71307669 + MER51-int LTR ERV1 2472 2587 -2428 341 234 16 62 chr17 14130881 14131009 -71307471 + MER51-int LTR ERV1 693 814 -7002 503 261 39 65 chr17 14131085 14131388 -71307092 + MER51-int LTR ERV1 1434 1630 -5046 313 309 65 0 chr17 14131667 14131790 -71306690 + MER51-int LTR ERV1 1900 2030 -1058 524 341 8 11 chr17 14132007 14132274 -71306206 + MER51-int LTR ERV1 2342 2607 -4069 959 128 63 11 chr17 14132417 14132596 -71305884 + MER51A LTR ERV1 143 426 -208 627 87 76 0 chr17 14133154 14133246 -71305234 - AluSg/x SINE Alu -46 266 168 2412 167 31 31 chr17 14133246 14133694 -71304786 + MER70A LTR ERVL 25 472 0 846 219 17 6 chr17 14133985 14134163 -71304317 - MLT2B3 LTR ERVL -374 180 1 290 276 0 26 chr17 14134209 14134285 -71304195 - L2 LINE L2 -1 3312 3239 23 54 0 0 chr17 14134309 14134346 -71304134 + AT_rich Low_complexity Low_complexity 1 37 0 1915 191 82 32 chr17 14134390 14134851 -71303629 - LTR2B LTR ERV1 0 490 7 1059 142 26 21 chr17 14134851 14135041 -71303439 - L1MA7 LINE L1 -44 6247 6057 241 281 26 98 chr17 14135387 14135540 -71302940 + MER5A DNA MER1_type 35 176 -13 2466 33 40 10 chr17 14135983 14136285 -71302195 + AluY SINE Alu 1 311 0 340 309 53 20 chr17 14137222 14137374 -71301106 - MARNA DNA Mariner -350 236 80 1387 159 5 9 chr17 14137953 14138173 -71300307 + MSTB LTR MaLR 1 219 -207 330 245 75 123 chr17 14138684 14138788 -71299692 + L1ME1 LINE L1 5955 6062 -104 1794 158 34 14 chr17 14138788 14139080 -71299400 + AluJb SINE Alu 1 298 -14 2342 68 0 0 chr17 14139083 14139378 -71299102 + L1PA5 LINE L1 5856 6150 -4 330 245 75 123 chr17 14139378 14139481 -71298999 + L1ME1 LINE L1 6064 6156 -10 245 172 47 16 chr17 14139735 14139799 -71298681 - MER103 DNA DNA -9 157 92 22 0 0 0 chr17 14139884 14139906 -71298574 + AT_rich Low_complexity Low_complexity 1 22 0 189 74 0 0 chr17 14139916 14139943 -71298537 + (CA)n Simple_repeat Simple_repeat 2 28 0 804 211 89 117 chr17 14139948 14140317 -71298163 - MLT2D LTR ERVL -50 364 6 397 193 24 12 chr17 14140328 14140411 -71298069 - MER33 DNA MER1_type -230 94 11 464 193 0 0 chr17 14140420 14140508 -71297972 - MER103 DNA DNA -69 97 10 207 171 49 0 chr17 14140530 14140571 -71297909 + (ATTG)n Simple_repeat Simple_repeat 2 44 0 668 260 35 40 chr17 14140664 14140864 -71297616 + Charlie8 DNA MER1_type 39 237 -2180 262 325 8 43 chr17 14141022 14141139 -71297341 - MIR SINE MIR -56 152 40 387 0 0 0 chr17 14141717 14141760 -71296720 + (TG)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr17 14144173 14144193 -71294287 + (A)n Simple_repeat Simple_repeat 1 20 0 1135 207 43 57 chr17 14146564 14146606 -71291874 - MER58B DNA MER1_type -2079 341 300 2301 109 0 0 chr17 14146606 14146908 -71291572 - AluSx SINE Alu -10 302 1 1135 207 43 57 chr17 14146908 14147165 -71291315 - MER58B DNA MER1_type -2120 300 46 265 250 12 0 chr17 14147282 14147362 -71291118 + (TGAA)n Simple_repeat Simple_repeat 4 84 0 349 304 71 36 chr17 14147485 14147653 -71290827 - L2 LINE L2 0 3313 3140 1392 159 0 21 chr17 14147732 14147965 -71290515 + AluJb SINE Alu 73 300 -12 1170 220 75 12 chr17 14148124 14148447 -71290033 + MLT1A1 LTR MaLR 9 365 0 453 260 86 40 chr17 14149186 14149582 -71288898 + L1ME LINE L1 4928 5341 -805 215 247 82 14 chr17 14149601 14149674 -71288806 - L2 LINE L2 0 3313 3236 397 283 12 64 chr17 14149708 14149754 -71288726 + LTR16A LTR ERVL 99 146 -304 2545 138 41 5 chr17 14149754 14150167 -71288313 + MSTA LTR MaLR 1 428 0 397 283 12 64 chr17 14150167 14150293 -71288187 + LTR16A LTR ERVL 146 262 -188 276 313 103 36 chr17 14150421 14150616 -71287864 + L1ME LINE L1 5386 5593 -528 861 142 0 8 chr17 14150867 14150994 -71287486 - FLAM_C SINE Alu -16 127 2 2119 56 44 7 chr17 14151751 14152049 -71286431 - AluY SINE Alu 0 310 3 225 319 44 9 chr17 14152059 14152172 -71286308 + L2 LINE L2 1933 2049 -1265 1897 147 20 3 chr17 14152177 14152476 -71286004 - AluJb SINE Alu -8 304 1 182 311 67 52 chr17 14152555 14152822 -71285658 - L2 LINE L2 -1265 2049 1779 557 186 10 0 chr17 14152959 14153061 -71285419 - MER58B DNA MER1_type 0 341 239 1054 146 38 16 chr17 14153108 14153293 -71285187 - MER5A DNA MER1_type 0 189 1 751 282 0 5 chr17 14153568 14153777 -71284703 + MER63A DNA MER1_type 1 208 -2 259 289 94 57 chr17 14154221 14154380 -71284100 - MER5B DNA MER1_type -5 173 9 2014 137 0 49 chr17 14154470 14154798 -71283682 + AluJo SINE Alu 1 312 0 256 379 8 15 chr17 14154875 14155007 -71283473 - MIR3 SINE MIR -73 135 5 191 319 28 0 chr17 14156380 14156452 -71282028 + MIR SINE MIR 57 130 -78 687 101 0 0 chr17 14156622 14156721 -71281759 - L1PA8 LINE L1 -2 6170 6072 2275 117 0 0 chr17 14156893 14157201 -71281279 - AluSc SINE Alu -1 308 1 246 304 14 0 chr17 14157202 14157271 -71281209 - MIR SINE MIR -114 148 79 2357 100 0 3 chr17 14157763 14158073 -71280407 + AluSx SINE Alu 1 309 -3 262 203 54 27 chr17 14158750 14158824 -71279656 + L1MC5 LINE L1 7849 7924 -37 2328 105 0 3 chr17 14159216 14159521 -71278959 + AluSg SINE Alu 1 304 -6 2174 172 50 12 chr17 14159853 14159898 -71278582 + MSTA LTR MaLR 1 43 -385 1622 197 14 3 chr17 14159898 14160187 -71278293 + AluJb SINE Alu 6 297 -15 2174 172 50 12 chr17 14160187 14160567 -71277913 + MSTA LTR MaLR 43 428 0 464 289 185 35 chr17 14161095 14161441 -71277039 + MLT1L LTR MaLR 210 607 -8 335 295 33 16 chr17 14162026 14162148 -71276332 + L1ME1 LINE L1 6043 6166 0 462 304 104 66 chr17 14162148 14162290 -71276190 + L1M4 LINE L1 2235 2370 -3776 1980 112 0 25 chr17 14162290 14162576 -71275904 + AluSx SINE Alu 34 312 0 462 304 104 66 chr17 14162576 14163343 -71275137 + L1M4 LINE L1 2370 3179 -2967 596 215 40 105 chr17 14163437 14163665 -71274815 - MER58C DNA MER1_type -1 214 2 460 290 28 23 chr17 14163665 14163841 -71274639 + MER5B DNA MER1_type 2 178 0 884 185 45 6 chr17 14163849 14164027 -71274453 + MER5A DNA MER1_type 1 185 -4 21 36 0 0 chr17 14164252 14164280 -71274200 + AT_rich Low_complexity Low_complexity 1 28 0 2240 127 0 0 chr17 14165114 14165414 -71273066 + AluSg SINE Alu 1 300 -10 2067 121 0 4 chr17 14166858 14167220 -71271260 - AluSc SINE Alu 0 361 1 1541 174 61 0 chr17 14167749 14168050 -71270430 - AluJb SINE Alu 0 319 3 666 266 138 56 chr17 14168370 14168746 -71269734 - MLT1I LTR MaLR -2 407 1 345 216 11 23 chr17 14168782 14168870 -71269610 - LTR67 LTR ERVL -13 544 458 524 234 41 29 chr17 14169932 14170081 -71268399 - MLT1H LTR MaLR -15 609 384 473 302 58 50 chr17 14170137 14170415 -71268065 - MLT1H LTR MaLR -258 291 12 1149 269 72 75 chr17 14171493 14172218 -71266262 + Charlie7 DNA MER1_type 2 724 -1888 586 243 91 66 chr17 14172628 14172721 -71265759 - MIR SINE MIR -6 256 167 1984 147 54 48 chr17 14172721 14173000 -71265480 + MER1B DNA MER1_type 2 278 -2432 2162 95 0 11 chr17 14173000 14173283 -71265197 + AluSq SINE Alu 1 280 -33 411 21 0 0 chr17 14173283 14173331 -71265149 + (CA)n Simple_repeat Simple_repeat 1 48 0 1984 147 54 48 chr17 14173331 14173384 -71265096 + MER1B DNA MER1_type 277 337 0 586 243 91 66 chr17 14173384 14173395 -71265085 - MIR SINE MIR -95 167 158 2175 206 127 39 chr17 14173395 14173940 -71264540 + MLT1E LTR MaLR 1 593 0 586 243 91 66 chr17 14173940 14174077 -71264403 - MIR SINE MIR -104 158 8 513 316 0 13 chr17 14174426 14174584 -71263896 + MIR3 SINE MIR 20 175 -33 301 246 109 58 chr17 14175599 14175737 -71262743 + L2 LINE L2 2872 3016 -297 367 223 80 27 chr17 14175865 14175977 -71262503 + LTR16C LTR ERVL 371 488 -3 412 199 133 60 chr17 14176072 14176223 -71262257 + L2 LINE L2 3152 3313 0 207 0 0 0 chr17 14176585 14176608 -71261872 + (A)n Simple_repeat Simple_repeat 1 23 0 603 252 63 19 chr17 14177631 14177837 -71260643 + L2 LINE L2 2684 2898 -416 4073 154 24 63 chr17 14177901 14178429 -71260051 + L1MB3 LINE L1 5379 5863 -320 1761 114 0 4 chr17 14178429 14178665 -71259815 + AluSg SINE Alu 1 235 -75 4073 154 24 63 chr17 14178665 14178974 -71259506 + L1MB3 LINE L1 5863 6183 0 647 241 57 88 chr17 14179328 14179392 -71259088 + L1ME2 LINE L1 5812 5876 -288 2487 63 0 0 chr17 14179392 14179692 -71258788 + AluY SINE Alu 1 300 -11 647 241 57 88 chr17 14179692 14179979 -71258501 + L1ME2 LINE L1 5876 6152 -12 606 89 38 0 chr17 14180288 14180367 -71258113 + AluY SINE Alu 2 83 -228 2214 96 24 0 chr17 14180479 14180771 -71257709 + AluSp SINE Alu 1 299 -14 1131 166 9 23 chr17 14180943 14181160 -71257320 - AluSg/x SINE Alu -14 298 85 938 158 33 0 chr17 14181180 14181364 -71257116 - L1MA8 LINE L1 -244 6047 5858 349 291 30 15 chr17 14181505 14181639 -71256841 + LTR37A LTR ERV1 146 281 -145 592 137 11 0 chr17 14182474 14182569 -71255911 - MER83 LTR ERV1 0 448 353 2431 141 37 5 chr17 14182608 14183042 -71255438 + Tigger3b DNA MER2_type 209 656 -575 759 224 13 7 chr17 14183044 14183196 -71255284 - AluJb SINE Alu -12 300 148 1009 259 34 17 chr17 14185120 14185414 -71253066 - MER89-int LTR ERV1 -5142 1659 1361 1577 196 63 9 chr17 14185423 14185754 -71252726 - MLT1A1 LTR MaLR -4 361 13 339 244 0 22 chr17 14185766 14185856 -71252624 - MER89-int LTR ERV1 -5444 1357 1270 203 376 10 0 chr17 14186950 14187051 -71251429 + (CA)n Simple_repeat Simple_repeat 2 103 0 1402 181 67 38 chr17 14187945 14188541 -71249939 + L1MC/D LINE L1 2350 2961 -3579 * 1704 240 106 44 chr17 14188539 14189244 -71249236 + L1MC/D LINE L1 3369 4117 -2423 2717 162 27 17 chr17 14189274 14189593 -71248887 + Tigger7 DNA MER2_type 17 344 -389 2491 133 5 19 chr17 14189593 14189961 -71248519 + THE1B LTR MaLR 1 363 -1 2717 162 27 17 chr17 14189961 14190115 -71248365 + Tigger7 DNA MER2_type 344 495 -238 2292 78 7 7 chr17 14190115 14190410 -71248070 + AluY SINE Alu 1 295 -16 716 256 111 87 chr17 14190412 14191543 -71246937 + L1MC/D LINE L1 4950 5722 -818 920 224 45 5 chr17 14191669 14191870 -71246610 + MIR SINE MIR 28 236 -26 198 224 0 0 chr17 14191883 14191932 -71246548 + (CAT)n Simple_repeat Simple_repeat 2 50 0 22 35 0 0 chr17 14192511 14192540 -71245940 + AT_rich Low_complexity Low_complexity 1 29 0 986 277 113 38 chr17 14192708 14193232 -71245248 - MLT1L LTR MaLR -12 603 41 377 282 149 22 chr17 14193346 14193527 -71244953 + MLT1L LTR MaLR 1 204 -411 564 252 20 7 chr17 14193695 14193846 -71244634 + MLT1L LTR MaLR 455 607 -8 2445 68 0 0 chr17 14194349 14194642 -71243838 + AluY SINE Alu 15 307 -4 22 0 0 0 chr17 14195234 14195256 -71243224 + AT_rich Low_complexity Low_complexity 1 22 0 1452 147 56 56 chr17 14195256 14195562 -71242918 - L1MA9 LINE L1 -22 6290 5985 2579 117 28 53 chr17 14195626 14195670 -71242810 - MSTA LTR MaLR -2 426 382 2063 103 48 0 chr17 14195670 14195960 -71242520 + AluSc SINE Alu 1 304 -5 2579 117 28 53 chr17 14195960 14196352 -71242128 - MSTA LTR MaLR -46 382 1 1269 194 104 7 chr17 14196442 14196731 -71241749 + L1MD3 LINE L1 7655 7971 -24 915 179 124 79 chr17 14197275 14197695 -71240785 - L1MC5 LINE L1 -30 7931 7493 344 247 0 0 chr17 14197713 14197790 -71240690 - L1MC5 LINE L1 -518 7443 7367 917 326 32 58 chr17 14197897 14198355 -71240125 + L2 LINE L2 2270 2707 -607 2192 121 7 0 chr17 14198355 14198662 -71239818 + AluSq SINE Alu 1 309 -4 917 326 32 58 chr17 14198662 14198880 -71239600 + L2 LINE L2 2707 2929 -385 238 313 72 0 chr17 14199086 14199169 -71239311 - L2 LINE L2 -27 3286 3198 3024 183 19 42 chr17 14199212 14199779 -71238701 + MLT2B3 LTR ERVL 1 554 0 2166 114 13 0 chr17 14199902 14200209 -71238271 + AluSq SINE Alu 1 311 -2 639 184 0 88 chr17 14200678 14200741 -71237739 + AluJb SINE Alu 2 48 -264 2249 100 13 0 chr17 14200741 14201040 -71237440 - AluSp SINE Alu -10 303 1 639 184 0 88 chr17 14201040 14201112 -71237368 + AluJb SINE Alu 48 125 -187 469 57 11 114 chr17 14201112 14201200 -71237280 + MLT2B2 LTR ERVL 437 515 0 215 219 0 0 chr17 14201202 14201243 -71237237 + (TGAA)n Simple_repeat Simple_repeat 2 42 0 1041 183 0 0 chr17 14201279 14201443 -71237037 + AluJb SINE Alu 134 297 -15 277 271 105 60 chr17 14202585 14202851 -71235629 - HAL1b LINE L1 -650 698 421 5853 182 22 12 chr17 14203109 14204526 -71233954 - L1MC2 LINE L1 -8 6336 4906 229 308 19 65 chr17 14204822 14204929 -71233551 - MER94 DNA DNA -27 107 6 378 225 12 0 chr17 14205097 14205177 -71233303 - MIR SINE MIR -71 191 111 1711 151 7 22 chr17 14205433 14205711 -71232769 + AluJb SINE Alu 1 274 -38 315 0 0 0 chr17 14205711 14205746 -71232734 + (TC)n Simple_repeat Simple_repeat 1 35 0 * 378 0 0 0 chr17 14205745 14205787 -71232693 + (CA)n Simple_repeat Simple_repeat 1 42 0 433 223 23 0 chr17 14206399 14206505 -71231975 + MER5A DNA MER1_type 4 112 -77 693 106 0 0 chr17 14207802 14207906 -71230574 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 1952 94 91 14 chr17 14207906 14208193 -71230287 - AluSc SINE Alu 0 309 1 255 240 0 0 chr17 14208195 14208245 -71230235 + MER91 DNA MER1_type 144 193 -3 1989 121 0 3 chr17 14209636 14209918 -71228562 + AluSx SINE Alu 1 281 -31 891 316 10 10 chr17 14209940 14210253 -71228227 - LTR16B LTR ERVL -114 350 38 1960 110 24 17 chr17 14210395 14210687 -71227793 + L1MA8 LINE L1 5995 6288 -3 2230 119 0 6 chr17 14210698 14211009 -71227471 + AluSx SINE Alu 1 309 -3 234 226 172 61 chr17 14211813 14211937 -71226543 - MIR SINE MIR -66 142 35 353 105 0 132 chr17 14212002 14212078 -71226402 - L1PA10 LINE L1 0 6168 6103 284 186 32 186 chr17 14212123 14212279 -71226201 + L1MC5 LINE L1 7786 7917 -44 587 272 146 22 chr17 14213349 14213713 -71224767 - L1ME LINE L1 -365 5756 5348 799 168 8 0 chr17 14213801 14213932 -71224548 - FLAM_A SINE Alu -1 132 1 441 317 95 35 chr17 14214253 14214591 -71223889 - L1ME LINE L1 -1301 4845 4488 488 269 65 104 chr17 14214656 14214965 -71223515 + MLT1J2 LTR MaLR 85 422 -28 2544 153 37 58 chr17 14215366 14215881 -71222599 + MLT1D LTR MaLR 1 504 -1 531 266 53 53 chr17 14216114 14216340 -71222140 - MIR SINE MIR -29 233 8 202 0 29 57 chr17 14216880 14216915 -71221565 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 358 250 136 7 chr17 14217572 14217712 -71220768 - HAL1b LINE L1 -718 630 473 220 245 50 145 chr17 14217934 14217988 -71220492 + MIR SINE MIR 47 105 -157 1212 191 130 77 chr17 14217988 14218058 -71220422 + MLT1C LTR MaLR 2 67 -400 1808 176 3 3 chr17 14218058 14218370 -71220110 - AluJo SINE Alu 0 312 1 1212 191 130 77 chr17 14218370 14218738 -71219742 + MLT1C LTR MaLR 67 463 -4 220 245 50 145 chr17 14218738 14218842 -71219638 + MIR SINE MIR 105 190 -72 184 265 15 73 chr17 14219047 14219115 -71219365 - MER5A DNA MER1_type -45 144 81 355 303 42 42 chr17 14219407 14219526 -71218954 + MIR SINE MIR 16 134 -128 * 504 127 57 0 chr17 14219525 14219633 -71218847 - AluYb8 SINE Alu -186 132 2 2090 90 0 0 chr17 14219847 14220114 -71218366 + AluY SINE Alu 37 303 -8 568 320 29 39 chr17 14220939 14221320 -71217160 - MLT1L LTR MaLR -112 503 127 917 192 210 0 chr17 14221963 14222254 -71216226 + LTR50 LTR ERVL 444 795 0 22 35 0 0 chr17 14223037 14223066 -71215414 + AT_rich Low_complexity Low_complexity 1 29 0 600 206 103 3 chr17 14223359 14223633 -71214847 - MLT1J LTR MaLR -27 484 93 3805 171 15 18 chr17 14223744 14224483 -71213997 - L1MB8 LINE L1 -6 6172 5436 224 278 135 48 chr17 14225182 14225308 -71213172 + L2 LINE L2 2957 3093 -179 181 164 18 91 chr17 14226812 14226867 -71211613 - L2 LINE L2 0 3272 3222 291 310 255 17 chr17 14230237 14230813 -71207667 + L2 LINE L2 2561 3286 -27 494 260 64 35 chr17 14230891 14231064 -71207416 - MIR SINE MIR -79 183 6 2677 218 74 35 chr17 14231112 14231905 -71206575 - L1ME1 LINE L1 -16 6150 5305 1844 154 20 10 chr17 14231905 14232203 -71206277 - AluJo SINE Alu -11 301 1 2677 218 74 35 chr17 14232203 14232446 -71206034 - L1ME1 LINE L1 -861 5305 5073 685 237 58 10 chr17 14232493 14232700 -71205780 - L1ME1 LINE L1 -1818 4328 4112 299 299 26 0 chr17 14233178 14233255 -71205225 + L2 LINE L2 3191 3269 -44 531 118 41 84 chr17 14233256 14233397 -71205083 + L1 LINE L1 5232 5366 -780 880 113 0 0 chr17 14233398 14233513 -71204967 + FLAM_C SINE Alu 11 125 -18 1386 194 99 0 chr17 14233528 14233812 -71204668 + AluJb SINE Alu 1 312 0 2116 140 8 21 chr17 14233812 14234198 -71204282 + L1P5 LINE L1 5352 5732 -424 181 338 162 32 chr17 14234242 14234742 -71203738 - L2 LINE L2 -616 2698 2134 414 333 57 50 chr17 14234757 14235036 -71203444 + L2 LINE L2 2987 3267 -5 1752 179 7 10 chr17 14235550 14235847 -71202633 - AluJo SINE Alu -16 296 1 2573 151 32 0 chr17 14236173 14236610 -71201870 - MSTB2 LTR MaLR -4 453 3 673 124 9 0 chr17 14236778 14236883 -71201597 + THE1C LTR MaLR 270 375 0 9811 115 21 45 chr17 14236885 14238501 -71199979 + THE1C-int LTR MaLR 3 1580 0 1792 149 58 25 chr17 14238501 14238864 -71199616 + THE1C LTR MaLR 1 375 0 12158 130 26 7 chr17 14238875 14239463 -71199017 - Tigger1 DNA MER2_type -373 2045 1470 2010 75 13 79 chr17 14239463 14239768 -71198712 + AluSg SINE Alu 17 301 -9 12158 130 26 7 chr17 14239768 14241185 -71197295 - Tigger1 DNA MER2_type -948 1470 1 370 208 119 0 chr17 14241336 14241437 -71197043 + MER94 DNA DNA 3 115 -19 13846 125 16 15 chr17 14241757 14242825 -71195655 - Ricksha DNA DNA -10 3236 2170 2082 103 7 7 chr17 14242825 14243144 -71195336 + AluSx SINE Alu 1 319 0 13846 125 16 15 chr17 14243144 14244410 -71194070 - Ricksha DNA DNA -1076 2170 905 869 166 28 93 chr17 14244410 14244657 -71193823 - MLT2B3 LTR ERVL 0 554 324 2285 141 14 0 chr17 14244658 14244921 -71193559 - Ricksha DNA DNA -2632 614 347 643 158 44 0 chr17 14244921 14245035 -71193445 - ERVL LTR ERVL -3 5761 5643 537 155 146 0 chr17 14245041 14245144 -71193336 - Ricksha DNA DNA -1928 118 1 189 94 0 0 chr17 14246652 14246684 -71191796 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 949 209 67 27 chr17 14246769 14246994 -71191486 + MER8 DNA MER2_type 6 239 0 366 280 72 8 chr17 14247176 14247301 -71191179 - MER94 DNA DNA -1 133 1 370 255 0 0 chr17 14247631 14247729 -71190751 - MER103 DNA DNA -67 99 2 253 288 163 12 chr17 14248783 14248943 -71189537 - L1ME LINE L1 -302 5819 5636 251 304 63 144 chr17 14249044 14249156 -71189324 - L2 LINE L2 -2 3270 3150 1445 205 49 9 chr17 14249156 14249483 -71188997 + MER58B DNA MER1_type 1 340 -1 251 304 63 144 chr17 14249483 14249752 -71188728 - L2 LINE L2 -122 3150 2920 370 292 154 60 chr17 14249786 14249853 -71188627 + MIR SINE MIR 2 61 -201 2187 72 10 17 chr17 14249853 14250146 -71188334 + AluY SINE Alu 1 291 -20 370 292 154 60 chr17 14250146 14250311 -71188169 + MIR SINE MIR 61 256 -6 239 246 0 0 chr17 14250498 14250555 -71187925 - L2 LINE L2 -704 2610 2554 2559 84 0 0 chr17 14250636 14250947 -71187533 - AluY SINE Alu 0 311 1 312 353 61 49 chr17 14250983 14251329 -71187151 + L2 LINE L2 2249 2598 -716 183 152 30 0 chr17 14251584 14251617 -71186863 + MIR SINE MIR 117 150 -112 418 227 20 47 chr17 14252065 14252082 -71186398 - L1MA10 LINE L1 -2 6332 6316 1525 229 49 82 chr17 14252082 14252754 -71185726 - L1ME1 LINE L1 -5 6161 5512 778 287 68 24 chr17 14252784 14253209 -71185271 + ERVL-F LTR ERVL 5278 5721 -43 1346 249 74 75 chr17 14253243 14253847 -71184633 + MLT2F LTR ERVL 3 607 -56 1982 132 39 39 chr17 14253847 14254211 -71184269 + THE1B LTR MaLR 1 364 0 1346 249 74 75 chr17 14254211 14254268 -71184212 + MLT2F LTR ERVL 607 663 0 22 0 0 0 chr17 14254427 14254449 -71184031 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr17 14254484 14254519 -71183961 + AT_rich Low_complexity Low_complexity 1 35 0 432 0 0 0 chr17 14254806 14254854 -71183626 + (TG)n Simple_repeat Simple_repeat 2 49 0 1994 145 3 7 chr17 14256089 14256392 -71182088 - AluJb SINE Alu -10 302 1 558 292 93 19 chr17 14256498 14256755 -71181725 - MLT1K LTR MaLR 0 588 313 360 199 46 26 chr17 14257338 14257489 -71180991 + (TTATA)n Simple_repeat Simple_repeat 5 158 0 244 180 16 16 chr17 14258449 14258510 -71179970 + L1ME4a LINE L1 5965 6025 -96 6953 111 20 20 chr17 14258598 14260296 -71178184 - L1MA2 LINE L1 0 6304 4609 754 352 52 28 chr17 14260493 14260919 -71177561 + L2 LINE L2 2527 2962 -352 198 103 0 0 chr17 14261562 14261591 -71176889 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr17 14263109 14263138 -71175342 + AT_rich Low_complexity Low_complexity 1 29 0 1847 143 37 3 chr17 14264823 14265123 -71173357 - AluJo SINE Alu -2 310 1 322 268 126 65 chr17 14265847 14266078 -71172402 + L1ME4a LINE L1 5628 5872 -249 761 219 96 14 chr17 14267249 14267468 -71171012 - MIR SINE MIR -13 249 13 242 260 68 73 chr17 14268007 14268199 -71170281 + L1ME4a LINE L1 5733 5923 -198 189 0 0 0 chr17 14268409 14268430 -71170050 + (A)n Simple_repeat Simple_repeat 1 21 0 329 287 88 29 chr17 14268936 14269072 -71169408 - L1ME4a LINE L1 -208 5913 5770 402 252 76 38 chr17 14269076 14269314 -71169166 - L1ME4a LINE L1 -388 5733 5487 571 263 21 21 chr17 14270792 14270978 -71167502 + MER5A DNA MER1_type 2 187 -2 21 0 0 0 chr17 14271068 14271089 -71167391 + AT_rich Low_complexity Low_complexity 1 21 0 866 137 13 13 chr17 14271443 14271596 -71166884 + L1MD1 LINE L1 6090 6242 0 26 30 0 0 chr17 14272963 14272996 -71165484 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 14273537 14273559 -71164921 + AT_rich Low_complexity Low_complexity 1 22 0 35 78 0 0 chr17 14273788 14273865 -71164615 + AT_rich Low_complexity Low_complexity 1 77 0 27 0 0 0 chr17 14274903 14274930 -71163550 + AT_rich Low_complexity Low_complexity 1 27 0 293 320 87 23 chr17 14275770 14275942 -71162538 - MIR SINE MIR -74 188 6 30 69 0 0 chr17 14277036 14277094 -71161386 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr17 14277213 14277235 -71161245 + AT_rich Low_complexity Low_complexity 1 22 0 2040 109 7 10 chr17 14277235 14277539 -71160941 + AluSx SINE Alu 1 303 -9 402 21 0 0 chr17 14278415 14278462 -71160018 + (CA)n Simple_repeat Simple_repeat 1 47 0 193 288 180 36 chr17 14283115 14283226 -71155254 + MIR3 SINE MIR 12 138 -70 460 171 76 38 chr17 14284761 14284866 -71153614 - MIR SINE MIR -98 164 56 1251 320 159 27 chr17 14285762 14287029 -71151451 + L2 LINE L2 1851 3272 0 3454 157 57 72 chr17 14288063 14288860 -71149620 + LTR1 LTR ERV1 1 785 0 1144 263 80 62 chr17 14289463 14289704 -71148776 - L2 LINE L2 -558 2756 2521 198 0 0 0 chr17 14289704 14289726 -71148754 + (TG)n Simple_repeat Simple_repeat 2 23 0 1144 263 80 62 chr17 14289726 14289982 -71148498 - L2 LINE L2 -793 2521 2250 580 172 52 0 chr17 14290065 14290181 -71148299 - Tigger7 DNA MER2_type -2349 138 17 3672 162 30 3 chr17 14290366 14291039 -71147441 - L1PB4 LINE L1 -13 6143 5453 245 260 0 0 chr17 14291274 14291324 -71147156 - L2 LINE L2 -1 3271 3222 180 231 0 0 chr17 14291965 14292017 -71146463 + A-rich Low_complexity Low_complexity 6 57 0 223 361 83 0 chr17 14293278 14293386 -71145094 - L2 LINE L2 -452 2862 2746 268 321 43 51 chr17 14293397 14293640 -71144840 + L2 LINE L2 2735 2978 -294 250 188 0 31 chr17 14296088 14296152 -71142328 + (CATA)n Simple_repeat Simple_repeat 2 63 0 234 230 0 95 chr17 14298080 14298154 -71140326 + MIR SINE MIR 186 252 -10 536 321 30 0 chr17 14298386 14298554 -71139926 + L3 LINE CR1 1262 1434 -143 239 0 32 0 chr17 14298679 14298710 -71139770 + (TG)n Simple_repeat Simple_repeat 2 33 0 192 77 0 0 chr17 14298837 14298863 -71139617 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 371 181 219 0 chr17 14298952 14299057 -71139423 + MER94 DNA DNA 7 134 0 781 249 34 10 chr17 14299178 14299387 -71139093 + MER20 DNA MER1_type 1 214 -5 304 293 36 50 chr17 14299544 14299684 -71138796 + L1ME4a LINE L1 5299 5436 -897 473 273 68 70 chr17 14299887 14300064 -71138416 + L1ME4a LINE L1 5634 5810 -311 2100 126 0 10 chr17 14300064 14300373 -71138107 + AluSq SINE Alu 1 306 -7 473 273 68 70 chr17 14300373 14300595 -71137885 + L1ME4a LINE L1 5810 6032 -89 253 315 90 0 chr17 14300597 14300686 -71137794 + L2 LINE L2 3205 3301 -12 230 286 0 0 chr17 14300988 14301044 -71137436 + L1ME4a LINE L1 5622 5677 -444 323 296 26 0 chr17 14301054 14301169 -71137311 + L1ME4a LINE L1 5731 5848 -273 31 58 0 0 chr17 14301717 14301769 -71136711 + AT_rich Low_complexity Low_complexity 1 52 0 208 266 38 63 chr17 14304529 14304608 -71133872 - L2 LINE L2 0 3272 3196 532 336 169 18 chr17 14305171 14305317 -71133163 + L2 LINE L2 2422 2545 -727 1102 187 48 5 chr17 14305317 14305526 -71132954 + MER20 DNA MER1_type 1 218 -1 532 336 169 18 chr17 14305526 14306087 -71132393 + L2 LINE L2 2545 3240 -32 1133 159 26 10 chr17 14308303 14308498 -71129982 - MER2 DNA MER2_type -8 337 140 216 0 0 0 chr17 14309678 14309702 -71128778 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1723 171 23 0 chr17 14309712 14310016 -71128464 + AluJo SINE Alu 2 312 0 2297 144 81 0 chr17 14310066 14310461 -71128019 + MSTC LTR MaLR 2 428 0 1478 213 22 6 chr17 14310537 14310851 -71127629 + MLT1E3 LTR MaLR 304 622 -2 258 341 88 0 chr17 14310872 14311054 -71127426 - L2 LINE L2 -609 2705 2508 640 333 123 12 chr17 14311121 14311520 -71126960 - L3 LINE CR1 -19 1558 1116 222 255 0 0 chr17 14311525 14311576 -71126904 + MIR SINE MIR 197 247 -15 225 179 30 15 chr17 14312041 14312108 -71126372 + (TA)n Simple_repeat Simple_repeat 1 68 0 773 180 0 37 chr17 14312313 14312474 -71126006 - FRAM SINE Alu -21 155 1 611 340 45 47 chr17 14315416 14315775 -71122705 - L2 LINE L2 -1 3271 2914 21 0 0 0 chr17 14315918 14315939 -71122541 + AT_rich Low_complexity Low_complexity 1 21 0 185 306 65 65 chr17 14316516 14316640 -71121840 - MER5A DNA MER1_type -18 171 48 * 290 264 116 31 chr17 14316537 14316666 -71121814 + MER5A DNA MER1_type 49 188 -1 410 324 64 62 chr17 14317340 14317729 -71120751 + MLT1J LTR MaLR 116 505 -6 458 219 35 9 chr17 14318863 14318977 -71119503 - L2 LINE L2 -3 3310 3194 312 309 32 32 chr17 14319171 14319297 -71119183 + L2 LINE L2 3183 3308 -5 35 41 0 0 chr17 14320062 14320111 -71118369 + AT_rich Low_complexity Low_complexity 1 49 0 411 281 120 20 chr17 14320215 14320541 -71117939 + L1ME4a LINE L1 5161 5513 -657 516 290 124 19 chr17 14320544 14320803 -71117677 + L1ME4a LINE L1 5537 5822 -299 416 272 16 89 chr17 14320783 14321109 -71117371 + L1MC4a LINE L1 5643 5822 -340 * 748 234 77 30 chr17 14321124 14321359 -71117121 - MIR SINE MIR 0 262 17 2336 92 7 0 chr17 14321421 14321716 -71116764 + AluSq SINE Alu 1 297 -16 347 261 28 28 chr17 14321911 14322087 -71116393 + L1ME4a LINE L1 5944 6119 -2 437 294 7 7 chr17 14323461 14323607 -71114873 + MER5A DNA MER1_type 7 152 -37 25 0 0 0 chr17 14323677 14323702 -71114778 + AT_rich Low_complexity Low_complexity 1 25 0 28 48 0 0 chr17 14323898 14323940 -71114540 + AT_rich Low_complexity Low_complexity 1 42 0 468 338 68 28 chr17 14324065 14324535 -71113945 + L2 LINE L2 1963 2451 -863 821 231 49 0 chr17 14324633 14324836 -71113644 - MIR SINE MIR -31 231 19 210 174 0 0 chr17 14325016 14325062 -71113418 + CT-rich Low_complexity Low_complexity 1 46 0 793 186 106 6 chr17 14325164 14325325 -71113155 - MER58A DNA MER1_type -4 220 44 186 43 0 0 chr17 14325540 14325563 -71112917 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 2464 61 34 0 chr17 14325868 14326165 -71112315 + AluY SINE Alu 1 307 -4 493 278 99 10 chr17 14326170 14326474 -71112006 + L1ME4a LINE L1 5521 5857 -264 252 86 0 0 chr17 14326501 14326536 -71111944 + (CATA)n Simple_repeat Simple_repeat 2 36 0 534 274 114 20 chr17 14327152 14327353 -71111127 - MIR SINE MIR -21 241 22 189 0 0 0 chr17 14328437 14328458 -71110022 + (A)n Simple_repeat Simple_repeat 1 21 0 1357 155 159 7 chr17 14330006 14330277 -71108203 + AluJb SINE Alu 1 312 0 2469 69 0 7 chr17 14330368 14330672 -71107808 - AluY SINE Alu -9 302 1 229 330 32 0 chr17 14330872 14330966 -71107514 - MIR SINE MIR -60 148 52 631 85 24 0 chr17 14333775 14333857 -71104623 + AluSq/x SINE Alu 50 133 -179 2196 121 0 0 chr17 14333863 14334160 -71104320 + AluSq SINE Alu 4 300 -13 2100 118 0 56 chr17 14334457 14334779 -71103701 - AluSx SINE Alu -8 304 1 231 270 87 26 chr17 14335371 14335486 -71102994 - L1MC5 LINE L1 -44 7917 7796 395 234 0 11 chr17 14335499 14335593 -71102887 - MIR3 SINE MIR -34 174 82 660 289 45 28 chr17 14335855 14336146 -71102334 - L2 LINE L2 -3 3310 3015 1973 119 26 13 chr17 14337164 14337466 -71101014 + AluJo SINE Alu 1 306 -6 300 303 48 28 chr17 14337680 14337825 -71100655 + MIR SINE MIR 46 193 -69 1730 46 0 9 chr17 14338346 14338565 -71099915 + L1PA5 LINE L1 5938 6154 0 264 316 0 13 chr17 14338732 14338808 -71099672 - MIR SINE MIR -138 124 50 293 272 22 11 chr17 14338902 14338994 -71099486 + MER5B DNA MER1_type 2 94 -84 2274 105 0 0 chr17 14339316 14339612 -71098868 + AluSx SINE Alu 1 296 -16 227 256 12 37 chr17 14340067 14340149 -71098331 - MIR3 SINE MIR -35 173 94 1911 178 0 3 chr17 14340530 14340839 -71097641 - AluJo SINE Alu -4 308 1 516 168 43 54 chr17 14341200 14341385 -71097095 + L1M4 LINE L1 5304 5495 -671 2255 104 10 0 chr17 14342880 14343187 -71095293 + AluSp SINE Alu 4 313 0 26 0 0 0 chr17 14343676 14343702 -71094778 + AT_rich Low_complexity Low_complexity 1 26 0 501 184 7 52 chr17 14345050 14345186 -71093294 + L1PA13 LINE L1 6026 6155 -8 2067 129 0 10 chr17 14345227 14345537 -71092943 + AluSq SINE Alu 1 307 -6 3296 167 4 51 chr17 14345550 14346158 -71092322 + L1MA7 LINE L1 5620 6194 -97 2480 78 0 3 chr17 14346158 14346465 -71092015 - AluSc SINE Alu -3 306 1 3296 167 4 51 chr17 14346465 14346539 -71091941 + L1MA7 LINE L1 6194 6270 -21 671 317 33 12 chr17 14346622 14346865 -71091615 + MIR SINE MIR 15 262 0 473 291 64 43 chr17 14347761 14347995 -71090485 + MIR SINE MIR 23 261 -1 2573 147 40 27 chr17 14348524 14348544 -71089936 - MER31A LTR ERV1 0 485 467 2388 97 0 0 chr17 14348544 14348844 -71089636 + AluSx SINE Alu 1 300 -12 2573 147 40 27 chr17 14348844 14349300 -71089180 - MER31A LTR ERV1 -18 467 3 211 301 29 48 chr17 14349791 14349921 -71088559 - MIR SINE MIR -72 136 40 2155 138 0 0 chr17 14350684 14350995 -71087485 + AluSp SINE Alu 1 311 -2 2132 115 3 3 chr17 14351003 14351289 -71087191 + AluSc SINE Alu 1 286 -23 327 261 106 37 chr17 14351316 14351477 -71087003 + MER5B DNA MER1_type 6 177 -1 2099 115 3 33 chr17 14351790 14352094 -71086386 + AluSx SINE Alu 1 295 -17 823 157 27 0 chr17 14352424 14352571 -71085909 + MSTC LTR MaLR 228 378 -50 191 146 24 0 chr17 14352571 14352612 -71085868 + GA-rich Low_complexity Low_complexity 1 42 0 528 199 45 58 chr17 14353435 14353591 -71084889 - L1ME1 LINE L1 -2 6164 6011 2274 109 3 0 chr17 14353711 14354014 -71084466 - AluSx SINE Alu -8 304 1 243 150 0 0 chr17 14354113 14354153 -71084327 + MIR SINE MIR 106 145 -63 243 108 0 0 chr17 14354235 14354272 -71084208 + MIR SINE MIR 109 145 -63 1657 168 43 40 chr17 14354630 14354912 -71083568 + L1MC1 LINE L1 5981 6266 -67 750 207 35 12 chr17 14354912 14355081 -71083399 + FAM SINE Alu 1 173 -2 1657 168 43 40 chr17 14355081 14355150 -71083330 + L1MC1 LINE L1 6266 6333 0 1097 161 39 222 chr17 14355182 14355366 -71083114 + MER31A LTR ERV1 4 36 -430 1829 83 29 4 chr17 14355366 14355607 -71082873 + AluSp SINE Alu 1 247 -66 1097 161 39 222 chr17 14355607 14355936 -71082544 + MER31A LTR ERV1 36 423 -43 2278 88 0 7 chr17 14355936 14356241 -71082239 - AluSg SINE Alu -7 303 1 234 62 0 0 chr17 14356572 14356604 -71081876 + (A)n Simple_repeat Simple_repeat 1 32 0 306 0 0 0 chr17 14358842 14358876 -71079604 + (CA)n Simple_repeat Simple_repeat 2 35 0 242 288 135 12 chr17 14358924 14359087 -71079393 + MIR3 SINE MIR 5 187 -21 299 141 90 13 chr17 14359347 14359425 -71079055 + MIR SINE MIR 80 163 -99 506 127 25 34 chr17 14359842 14359960 -71078520 + T-rich Low_complexity Low_complexity 3 119 0 * 936 136 0 27 chr17 14359949 14360133 -71078347 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 759 181 0 21 chr17 14360563 14360707 -71077773 - FLAM_C SINE Alu 0 143 3 203 132 53 0 chr17 14361661 14361699 -71076781 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2433 84 0 7 chr17 14362477 14362787 -71075693 - AluSq SINE Alu -2 311 4 197 32 0 32 chr17 14362905 14362936 -71075544 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 315 161 0 0 chr17 14363365 14363421 -71075059 + (CA)n Simple_repeat Simple_repeat 1 56 0 1331 204 57 52 chr17 14363778 14364185 -71074295 + LTR37A LTR ERV1 18 426 0 1762 166 7 7 chr17 14364523 14364800 -71073680 + AluJo SINE Alu 11 287 -25 614 164 0 9 chr17 14364909 14365019 -71073461 + FLAM_A SINE Alu 33 141 -1 2411 94 0 7 chr17 14366221 14366528 -71071952 + AluSg SINE Alu 1 305 -5 232 328 0 31 chr17 14367079 14367207 -71071273 - MIR SINE MIR -61 147 24 21 0 0 0 chr17 14367418 14367439 -71071041 + AT_rich Low_complexity Low_complexity 1 21 0 303 93 0 0 chr17 14367441 14367484 -71070996 + (ATG)n Simple_repeat Simple_repeat 1 43 0 181 274 91 35 chr17 14368947 14369144 -71069336 + L2 LINE L2 2843 3050 -222 188 320 70 10 chr17 14369257 14369357 -71069123 + L2 LINE L2 2639 2744 -570 1413 67 52 5 chr17 14369450 14369644 -71068836 + L1PB1 LINE L1 5949 6151 0 310 147 15 59 chr17 14369742 14369810 -71068670 + L2 LINE L2 3156 3220 -93 227 182 0 23 chr17 14373516 14373560 -71064920 + MER103 DNA DNA 57 99 -67 2192 99 7 0 chr17 14373591 14373884 -71064596 - AluSq SINE Alu -16 297 3 304 202 182 10 chr17 14373925 14374024 -71064456 + MER5C DNA MER1_type 9 124 -200 407 306 62 0 chr17 14374724 14374868 -71063612 - Charlie8 DNA MER1_type -2211 206 54 824 225 50 46 chr17 14374875 14375137 -71063343 + L1ME3A LINE L1 5906 6168 -2 2351 77 3 0 chr17 14375148 14375458 -71063022 + AluSp SINE Alu 1 311 -2 2210 94 3 0 chr17 14375557 14375856 -71062624 + AluSq SINE Alu 1 300 -13 992 94 0 0 chr17 14376159 14376286 -71062194 + AluSg SINE Alu 1 127 -183 308 127 18 0 chr17 14376291 14376346 -71062134 + (CA)n Simple_repeat Simple_repeat 2 57 0 1188 117 0 11 chr17 14376346 14376525 -71061955 + AluSg SINE Alu 127 303 -9 265 241 188 80 chr17 14377148 14377260 -71061220 + MIR SINE MIR 69 192 -70 1548 182 35 10 chr17 14377734 14378047 -71060433 + L1MC1 LINE L1 6004 6324 -9 1417 122 94 73 chr17 14378048 14378336 -71060144 + AluJo SINE Alu 1 294 -18 24 0 0 0 chr17 14379853 14379877 -71058603 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 14381150 14381179 -71057301 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr17 14381850 14381871 -71056609 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 14381988 14382016 -71056464 + AT_rich Low_complexity Low_complexity 1 28 0 1035 216 82 9 chr17 14383414 14383645 -71054835 + MIR SINE MIR 10 257 -5 211 259 19 0 chr17 14385848 14385902 -71052578 - MIR SINE MIR -196 66 12 28 61 0 0 chr17 14386712 14386761 -71051719 + GC_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr17 14387823 14387846 -71050634 + GC_rich Low_complexity Low_complexity 1 23 0 378 0 0 0 chr17 14388951 14388993 -71049487 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 333 133 8 chr17 14391463 14391583 -71046897 + MIR3 SINE MIR 68 202 -6 326 239 160 41 chr17 14392554 14392847 -71045633 + LTR33 LTR ERVL 194 521 0 200 316 160 47 chr17 14392941 14393197 -71045283 + L2 LINE L2 1050 1334 -1980 733 249 161 42 chr17 14393447 14393801 -71044679 + LTR16A LTR ERVL 52 447 -3 225 0 0 0 chr17 14393849 14393874 -71044606 + (T)n Simple_repeat Simple_repeat 1 25 0 634 277 88 56 chr17 14394382 14394426 -71044054 - HAL1b LINE L1 -346 1002 961 2231 82 3 3 chr17 14394426 14394729 -71043751 + AluSc SINE Alu 1 303 -6 634 277 88 56 chr17 14394729 14395240 -71043240 - HAL1b LINE L1 -387 961 429 1821 148 7 3 chr17 14395606 14395903 -71042577 - AluJo SINE Alu -10 302 5 1752 158 74 6 chr17 14396383 14396454 -71042026 + MER7A DNA MER2_type 3 68 -2970 3437 57 0 0 chr17 14396454 14396877 -71041603 + L1PA5 LINE L1 5730 6152 -2 1752 158 74 6 chr17 14396877 14397128 -71041352 + MER7A DNA MER2_type 68 345 -1 4290 137 95 16 chr17 14397492 14397569 -71040911 - L1MC2 LINE L1 -12 6332 6262 417 54 0 0 chr17 14397569 14397625 -71040855 + (CA)n Simple_repeat Simple_repeat 2 57 0 1714 142 91 34 chr17 14397625 14397977 -71040503 - THE1C LTR MaLR 0 375 4 342 0 0 0 chr17 14397977 14398015 -71040465 + (TC)n Simple_repeat Simple_repeat 1 38 0 255 79 0 0 chr17 14398014 14398052 -71040428 + (CA)n Simple_repeat Simple_repeat 1 38 0 4290 137 95 16 chr17 14398015 14398334 -71040146 - L1MC2 LINE L1 -82 6262 5970 1139 206 56 80 chr17 14398334 14398708 -71039772 + MLT1A1 LTR MaLR 1 365 0 4290 137 95 16 chr17 14398708 14399131 -71039349 - L1MC2 LINE L1 -374 5970 5485 23 0 0 0 chr17 14399144 14399167 -71039313 + AT_rich Low_complexity Low_complexity 1 23 0 1575 166 21 14 chr17 14399301 14399623 -71038857 - AluJo SINE Alu 0 324 1 362 271 118 65 chr17 14399672 14399934 -71038546 - L1M4c LINE L1 -3992 2392 2117 241 235 0 0 chr17 14399959 14400010 -71038470 + MLT1I LTR MaLR 93 143 -266 303 216 224 0 chr17 14400192 14400298 -71038182 + MLT1H1 LTR MaLR 421 555 0 532 345 99 30 chr17 14400398 14400760 -71037720 - HAL1 LINE L1 -1009 1498 1112 2131 108 3 0 chr17 14400850 14401156 -71037324 + AluSp SINE Alu 1 307 -6 1257 328 127 33 chr17 14401738 14401876 -71036604 + L2 LINE L2 1921 2045 -1268 5417 134 22 43 chr17 14401876 14402057 -71036423 + MER49 LTR ERV1 1 184 -739 1867 154 3 3 chr17 14402057 14402362 -71036118 - AluJb SINE Alu -7 305 1 5417 134 22 43 chr17 14402362 14402435 -71036045 + MER49 LTR ERV1 184 257 -666 1541 163 3 49 chr17 14402435 14402742 -71035738 + AluJo SINE Alu 1 293 -19 5417 134 22 43 chr17 14402742 14403429 -71035051 + MER49 LTR ERV1 257 923 0 1257 328 127 33 chr17 14403429 14403493 -71034987 + L2 LINE L2 2045 2102 -1211 1052 110 87 83 chr17 14403493 14403711 -71034769 + MER20 DNA MER1_type 1 219 0 1257 328 127 33 chr17 14403711 14404667 -71033813 + L2 LINE L2 2102 3196 -117 189 274 41 41 chr17 14404719 14404792 -71033688 + MIR SINE MIR 175 247 -15 522 147 343 28 chr17 14404917 14405060 -71033420 + MER5A DNA MER1_type 1 188 -1 207 204 0 0 chr17 14405069 14405113 -71033367 + T-rich Low_complexity Low_complexity 1 44 0 3621 180 19 22 chr17 14405129 14405517 -71032963 - L1MB2 LINE L1 -53 6118 5731 2132 63 0 88 chr17 14405517 14405848 -71032632 - AluY SINE Alu -9 302 1 3621 180 19 22 chr17 14405848 14406176 -71032304 - L1MB2 LINE L1 -440 5731 5404 2126 104 0 0 chr17 14407881 14408179 -71030301 - AluSx SINE Alu -14 298 1 252 276 69 0 chr17 14408236 14408323 -71030157 + MIR SINE MIR 61 153 -109 298 203 81 0 chr17 14408743 14408817 -71029663 - Charlie8 DNA MER1_type -2235 182 103 2134 98 3 3 chr17 14409042 14409338 -71029142 - AluSc SINE Alu -13 296 1 194 303 132 0 chr17 14409852 14409928 -71028552 - L2 LINE L2 0 3272 3187 1009 295 103 49 chr17 14410471 14411047 -71027433 + L2 LINE L2 2079 2622 -691 2222 72 0 56 chr17 14411047 14411368 -71027112 + AluY SINE Alu 1 303 -8 1009 295 103 49 chr17 14411368 14411909 -71026571 + L2 LINE L2 2622 3300 -13 281 341 9 33 chr17 14411954 14412168 -71026312 + L1MB4 LINE L1 14 222 -6320 2598 213 38 55 chr17 14412458 14413604 -71024876 + L1MB4 LINE L1 583 1692 -4862 6208 202 50 38 chr17 14413607 14413832 -71024648 + L1MB4 LINE L1 1826 2047 -4631 2045 130 0 0 chr17 14413832 14414133 -71024347 + AluSc SINE Alu 1 301 -8 6208 202 50 38 chr17 14414133 14417281 -71021199 + L1MB4 LINE L1 2047 5969 -709 2055 119 0 3 chr17 14417281 14417574 -71020906 - AluSq SINE Alu -21 292 1 6208 202 50 38 chr17 14417574 14418294 -71020186 + L1MB4 LINE L1 5969 6678 0 1264 207 52 83 chr17 14419513 14419966 -71018514 + MLT1C LTR MaLR 16 467 0 292 235 163 0 chr17 14421174 14421272 -71017208 + MLT1D LTR MaLR 1 114 -391 1963 152 101 29 chr17 14421345 14421720 -71016760 - MSTB LTR MaLR -24 402 1 2030 112 0 0 chr17 14421814 14422092 -71016388 - AluSg SINE Alu -32 278 1 1094 204 56 111 chr17 14422099 14422423 -71016057 + MLT1D LTR MaLR 162 505 0 3102 197 70 85 chr17 14422996 14423868 -71014612 + MER21B LTR ERV1 2 860 -3 280 192 77 92 chr17 14423923 14424053 -71014427 - MIR SINE MIR -110 152 25 1585 195 112 97 chr17 14424926 14424974 -71013506 - MLT2B2 LTR ERVL 0 515 469 207 0 0 0 chr17 14424974 14424997 -71013483 + (TG)n Simple_repeat Simple_repeat 2 24 0 1585 195 112 97 chr17 14424997 14425045 -71013435 - MLT2B2 LTR ERVL -46 469 423 4014 140 24 16 chr17 14425045 14425679 -71012801 - L1PB4 LINE L1 -1 6155 5517 1585 195 112 97 chr17 14425679 14426088 -71012392 - MLT2B2 LTR ERVL -92 423 1 294 194 194 0 chr17 14426387 14426454 -71012026 + MLT2B2 LTR ERVL 28 107 -408 647 253 5 11 chr17 14426455 14426645 -71011835 + L1MA4 LINE L1 6106 6294 -6 984 270 113 21 chr17 14426685 14427118 -71011362 - MLT1K LTR MaLR -3 473 1 1195 158 48 5 chr17 14427254 14427463 -71011017 + MER20 DNA MER1_type 1 218 -1 314 229 83 0 chr17 14428027 14428123 -71010357 - MLT1L LTR MaLR -2 613 510 564 215 22 22 chr17 14428236 14428371 -71010109 - MLT1L LTR MaLR -339 276 142 2102 125 0 3 chr17 14428940 14429243 -71009237 + AluSc SINE Alu 1 302 -7 487 342 30 20 chr17 14429611 14429810 -71008670 + MLT1I LTR MaLR 130 330 -79 2204 118 3 3 chr17 14429879 14430184 -71008296 + AluSg SINE Alu 1 305 -5 278 196 0 0 chr17 14430195 14430241 -71008239 + MLT1I LTR MaLR 358 403 -6 1632 244 86 15 chr17 14430376 14430852 -71007628 + MLT1E LTR MaLR 82 591 -2 2989 268 94 37 chr17 14430897 14431551 -71006929 - L2 LINE L2 -5 3308 2693 2355 110 0 0 chr17 14431551 14431861 -71006619 + AluSx SINE Alu 1 310 -2 2989 268 94 37 chr17 14431861 14432307 -71006173 - L2 LINE L2 -620 2693 2274 1900 96 36 66 chr17 14432307 14432609 -71005871 + AluSq SINE Alu 13 305 -8 2989 268 94 37 chr17 14432609 14432944 -71005536 - L2 LINE L2 -1039 2274 1808 703 204 105 135 chr17 14432944 14433099 -71005381 + MLT1A2 LTR MaLR 7 150 -240 1378 152 122 26 chr17 14433099 14433369 -71005111 + AluJb SINE Alu 1 296 -16 703 204 105 135 chr17 14433369 14433517 -71004963 + MLT1A2 LTR MaLR 150 301 -89 247 250 0 0 chr17 14433519 14433571 -71004909 - L2 LINE L2 -760 2554 2503 536 189 0 0 chr17 14433596 14433686 -71004794 + MLT1A2 LTR MaLR 301 390 0 850 262 49 65 chr17 14433686 14434071 -71004409 - L2 LINE L2 -1495 1819 1441 188 311 49 30 chr17 14434145 14434309 -71004171 - L2 LINE L2 -2144 1170 1004 225 0 0 0 chr17 14435173 14435198 -71003282 + (CA)n Simple_repeat Simple_repeat 1 25 0 2075 144 28 6 chr17 14435605 14435958 -71002522 - MER46B DNA MER2_type 0 236 1 2382 156 117 5 chr17 14436063 14436492 -71001988 - MER61D LTR ERV1 0 501 25 251 172 0 17 chr17 14436463 14436521 -71001959 - LTR28 LTR ERV1 -963 57 1 * 557 293 156 33 chr17 14436612 14436946 -71001534 + L2 LINE L2 2938 3312 -1 313 298 143 30 chr17 14437079 14437247 -71001233 + L1ME4a LINE L1 5319 5505 -657 547 279 107 30 chr17 14437284 14437649 -71000831 + L1ME4a LINE L1 5586 5978 -143 812 229 143 73 chr17 14437725 14438014 -71000466 + HAL1 LINE L1 1979 2247 -260 1513 172 4 0 chr17 14438014 14438252 -71000228 + AluJb SINE Alu 43 281 -31 369 43 0 0 chr17 14438259 14438306 -71000174 + (CA)n Simple_repeat Simple_repeat 2 48 0 812 229 143 73 chr17 14438306 14438498 -70999982 + HAL1 LINE L1 2252 2502 -5 1458 179 6 116 chr17 14438509 14438844 -70999636 + AluJb SINE Alu 1 298 -4 240 254 45 30 chr17 14439325 14439336 -70999144 - L2 LINE L2 -9 3263 3254 2215 109 0 19 chr17 14439336 14439647 -70998833 - AluSc SINE Alu -4 305 1 240 254 45 30 chr17 14439647 14439702 -70998778 - L2 LINE L2 -18 3254 3196 361 331 58 14 chr17 14439870 14440009 -70998471 + MIR SINE MIR 16 160 -102 699 162 176 28 chr17 14440074 14440216 -70998264 + FRAM SINE Alu 1 161 -15 2068 87 69 4 chr17 14440818 14441095 -70997385 + AluSg1 SINE Alu 1 295 -14 314 274 76 61 chr17 14441810 14442007 -70996473 + L1ME2 LINE L1 2 201 -5918 743 288 162 48 chr17 14442093 14443116 -70995364 + L1ME2 LINE L1 385 1625 -865 414 252 99 90 chr17 14443608 14443906 -70994574 + L1ME2 LINE L1 2126 2433 -3696 2917 138 23 19 chr17 14443906 14444378 -70994102 + MER101 LTR ERV1 1 474 0 414 252 99 90 chr17 14444378 14444655 -70993825 + L1ME2 LINE L1 2433 2706 -3423 963 151 0 7 chr17 14444675 14444821 -70993659 + FAM SINE Alu 18 162 -23 21 36 0 0 chr17 14444823 14444851 -70993629 + AT_rich Low_complexity Low_complexity 1 28 0 349 272 142 18 chr17 14444851 14445020 -70993460 + L1ME2 LINE L1 2700 2889 -3240 697 189 65 47 chr17 14445141 14445310 -70993170 + MER63A DNA MER1_type 39 210 0 823 266 94 63 chr17 14445323 14446047 -70992433 + L1ME2 LINE L1 2989 3748 -2381 1209 153 19 14 chr17 14446047 14446262 -70992218 - L1PA16 LINE L1 0 6166 5951 823 266 94 63 chr17 14446262 14446428 -70992052 + L1ME2 LINE L1 3748 3907 -2222 1773 49 0 0 chr17 14446428 14446632 -70991848 + L1PA3 LINE L1 5949 6152 -3 815 155 0 47 chr17 14446789 14446937 -70991543 + FLAM_C SINE Alu 2 142 -1 648 173 8 23 chr17 14447072 14447205 -70991275 + L1ME2 LINE L1 5691 5821 -345 1029 113 0 0 chr17 14447208 14447350 -70991130 + AluSg/x SINE Alu 170 311 -1 859 274 33 21 chr17 14447355 14447687 -70990793 + L1ME2 LINE L1 5828 6163 -1 411 279 212 28 chr17 14447694 14448025 -70990455 + L1ME2 LINE L1 4141 4537 -1592 2500 66 0 0 chr17 14448034 14448336 -70990144 + AluY SINE Alu 1 302 -9 491 264 67 63 chr17 14448340 14448624 -70989856 + L1ME2 LINE L1 5851 6135 -12 606 89 38 0 chr17 14448933 14449012 -70989468 + AluY SINE Alu 2 83 -228 2196 97 24 0 chr17 14449124 14449414 -70989066 + AluSp SINE Alu 1 297 -16 1138 152 18 37 chr17 14449586 14449803 -70988677 - AluSg/x SINE Alu -15 295 83 938 158 33 0 chr17 14449823 14450007 -70988473 - L1MA8 LINE L1 -244 6047 5858 337 299 30 15 chr17 14450148 14450282 -70988198 + LTR37A LTR ERV1 146 281 -145 592 137 11 0 chr17 14451117 14451212 -70987268 - MER83 LTR ERV1 0 448 353 2428 141 37 5 chr17 14451251 14451685 -70986795 + Tigger3b DNA MER2_type 209 656 -575 759 224 13 7 chr17 14451687 14451839 -70986641 - AluJb SINE Alu -12 300 148 1041 255 34 17 chr17 14453757 14454051 -70984429 - MER89-int LTR ERV1 -5142 1659 1361 1595 196 63 9 chr17 14454060 14454391 -70984089 - MLT1A1 LTR MaLR -4 361 13 339 244 0 22 chr17 14454403 14454493 -70983987 - MER89-int LTR ERV1 -5444 1357 1270 1391 183 67 38 chr17 14456580 14457175 -70981305 + L1MDa LINE L1 2350 2960 -3580 1709 241 107 44 chr17 14457177 14457879 -70980601 + L1MDa LINE L1 3372 4117 -2423 2717 175 26 16 chr17 14457909 14458228 -70980252 + Tigger7 DNA MER2_type 17 331 -2156 2467 136 5 19 chr17 14458228 14458596 -70979884 + THE1B LTR MaLR 1 363 -1 2717 175 26 16 chr17 14458596 14458752 -70979728 + Tigger7 DNA MER2_type 331 500 -1987 2286 110 0 7 chr17 14458752 14459062 -70979418 + AluSc SINE Alu 1 308 -1 2717 175 26 16 chr17 14459062 14459081 -70979399 + Tigger7 DNA MER2_type 500 517 -1970 296 336 8 0 chr17 14459351 14459473 -70979007 - MER20B DNA MER1_type -628 155 33 189 370 50 10 chr17 14461063 14461158 -70977322 + MIR SINE MIR 50 149 -109 2167 105 0 52 chr17 14461158 14461482 -70976998 + AluSx SINE Alu 1 307 -5 2048 119 3 14 chr17 14461939 14462233 -70976247 + AluSc SINE Alu 1 291 -18 225 348 22 0 chr17 14464328 14464417 -70974063 - L2 LINE L2 0 3313 3223 230 398 11 0 chr17 14464519 14464612 -70973868 - L2 LINE L2 -3107 207 114 471 288 36 36 chr17 14465245 14465467 -70973013 + L1MC4a LINE L1 6441 6662 -1146 692 230 132 62 chr17 14465486 14465678 -70972802 + MLT1K LTR MaLR 290 506 -82 2137 99 44 3 chr17 14465678 14465972 -70972508 - AluSc SINE Alu -3 306 1 692 230 132 62 chr17 14465972 14466036 -70972444 + MLT1K LTR MaLR 506 564 -24 1582 275 128 36 chr17 14466162 14467136 -70971344 - L2 LINE L2 -3 3310 2256 1934 224 45 25 chr17 14467304 14467665 -70970815 + Charlie1b DNA MER1_type 1 376 -2385 2196 101 0 14 chr17 14467665 14467961 -70970519 - AluSx SINE Alu -16 296 5 1934 224 45 25 chr17 14467961 14468108 -70970372 + Charlie1b DNA MER1_type 376 519 -4 2094 126 0 0 chr17 14469005 14469298 -70969182 + AluSx SINE Alu 1 293 -19 2311 122 0 0 chr17 14469611 14469922 -70968558 + AluSq SINE Alu 1 311 -2 277 241 5 151 chr17 14470047 14470246 -70968234 + L1ME4a LINE L1 5546 5715 -406 899 282 115 6 chr17 14470692 14471032 -70967448 + L1MC4 LINE L1 6690 7066 -976 291 267 133 15 chr17 14471286 14471421 -70967059 + L1ME4a LINE L1 5966 6116 -5 1014 241 92 15 chr17 14471761 14472097 -70966383 - MARNA DNA Mariner -148 438 77 231 310 76 44 chr17 14473472 14473630 -70964850 - L2 LINE L2 -190 3082 2920 228 195 0 0 chr17 14473637 14473678 -70964802 - L2 LINE L2 -16 3297 3257 383 208 0 13 chr17 14475098 14475175 -70963305 + L2 LINE L2 3206 3281 -32 441 261 22 15 chr17 14475258 14475392 -70963088 + MLT1K LTR MaLR 454 588 0 291 339 90 16 chr17 14476218 14476540 -70961940 + L2 LINE L2 2632 2977 -337 282 292 109 15 chr17 14478126 14478328 -70960152 - L2 LINE L2 -49 3264 3044 722 277 123 42 chr17 14478594 14478775 -70959705 - L2 LINE L2 -1 3312 3147 1884 70 25 0 chr17 14478775 14479016 -70959464 + AluSg/x SINE Alu 66 312 0 722 277 123 42 chr17 14479016 14479496 -70958984 - L2 LINE L2 -166 3147 2544 2122 185 65 7 chr17 14479844 14480260 -70958220 + Tigger7 DNA MER2_type 1 440 -2047 1327 191 70 30 chr17 14480260 14480631 -70957849 + L1MA7 LINE L1 5906 6291 0 22 0 0 0 chr17 14482053 14482075 -70956405 + AT_rich Low_complexity Low_complexity 1 22 0 295 232 61 0 chr17 14482900 14482999 -70955481 - MER20B DNA MER1_type -626 157 53 377 298 81 86 chr17 14483833 14484192 -70954288 - L2 LINE L2 -11 3261 2905 1557 165 4 23 chr17 14484346 14484607 -70953873 - AluJo SINE Alu -56 256 1 216 264 0 0 chr17 14484673 14484726 -70953754 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 353 61 19 chr17 14484767 14485127 -70953353 - L2 LINE L2 -635 2679 2305 33 56 0 0 chr17 14486152 14486206 -70952274 + AT_rich Low_complexity Low_complexity 1 54 0 214 311 78 0 chr17 14486441 14486544 -70951936 - L2 LINE L2 -234 3079 2969 180 298 0 0 chr17 14486773 14486830 -70951650 - L2 LINE L2 -957 2357 2301 193 246 70 0 chr17 14486870 14486927 -70951553 - MIR SINE MIR -77 185 125 1078 167 61 10 chr17 14487005 14487203 -70951277 + AluJo SINE Alu 92 299 -13 375 237 0 13 chr17 14488481 14488557 -70949923 - L2 LINE L2 -191 3081 3007 319 151 0 0 chr17 14490615 14490668 -70947812 + L2 LINE L2 3261 3313 0 191 216 0 62 chr17 14492900 14492997 -70945483 + L2 LINE L2 2888 2978 -294 1096 183 5 0 chr17 14493575 14493761 -70944719 + MER5A DNA MER1_type 3 189 0 882 216 50 0 chr17 14493868 14494067 -70944413 + MER3 DNA MER1_type 1 209 0 2449 61 0 3 chr17 14494702 14494995 -70943485 + AluSc SINE Alu 1 292 -17 449 293 79 13 chr17 14496025 14496254 -70942226 - MIR SINE MIR -17 245 2 8800 101 18 23 chr17 14499693 14501001 -70937479 + HSMAR2 DNA Mariner 1 1301 -1 189 107 0 0 chr17 14501305 14501333 -70937147 + (A)n Simple_repeat Simple_repeat 1 28 0 978 279 33 42 chr17 14501897 14502355 -70936125 - L1ME4a LINE L1 -182 5939 5486 196 220 20 20 chr17 14502476 14502526 -70935954 - MIR SINE MIR -62 146 97 410 302 69 35 chr17 14502792 14503080 -70935400 - L2 LINE L2 -72 3200 2903 26 64 0 0 chr17 14504241 14504288 -70934192 + AT_rich Low_complexity Low_complexity 1 47 0 324 103 138 0 chr17 14504479 14504537 -70933943 + MER5A DNA MER1_type 4 69 -120 365 323 62 0 chr17 14505053 14505183 -70933297 + MIR3 SINE MIR 2 139 -69 441 223 108 57 chr17 14505282 14505439 -70933041 + MIR SINE MIR 70 234 -28 198 0 0 0 chr17 14505448 14505470 -70933010 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 193 240 20 0 chr17 14505491 14505541 -70932939 - L2 LINE L2 -44 3269 3219 21 36 0 0 chr17 14506994 14507022 -70931458 + AT_rich Low_complexity Low_complexity 1 28 0 423 0 0 0 chr17 14507120 14507167 -70931313 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 430 229 12 0 chr17 14507196 14507279 -70931201 - 7SLRNA srpRNA srpRNA -236 84 1 21 0 0 0 chr17 14507292 14507313 -70931167 + AT_rich Low_complexity Low_complexity 1 21 0 953 112 17 17 chr17 14507528 14507706 -70930774 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1440 190 95 0 chr17 14507708 14507971 -70930509 - AluJo SINE Alu -24 288 1 277 192 144 29 chr17 14508740 14508844 -70929636 + L1MC4 LINE L1 7927 8042 0 331 270 65 100 chr17 14509268 14509527 -70928953 + HAL1 LINE L1 782 1048 -1459 1857 102 14 53 chr17 14509527 14509669 -70928811 + AluSp SINE Alu 2 129 -184 2352 71 16 16 chr17 14509669 14509978 -70928502 + AluSp SINE Alu 1 309 -4 1857 102 14 53 chr17 14509978 14510119 -70928361 + AluSp SINE Alu 129 274 -39 331 270 65 100 chr17 14510119 14510441 -70928039 + HAL1 LINE L1 1048 1343 -1164 693 270 39 80 chr17 14511167 14511556 -70926924 + L1ME4a LINE L1 5661 6033 -88 339 65 0 0 chr17 14511561 14511607 -70926873 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2302 105 3 0 chr17 14511640 14511945 -70926535 - AluSp SINE Alu -7 306 1 423 319 24 43 chr17 14513365 14513471 -70925009 + MIR SINE MIR 55 157 -105 2505 129 95 5 chr17 14513471 14513914 -70924566 + L1MA9 LINE L1 5830 6312 0 423 319 24 43 chr17 14513914 14514017 -70924463 + MIR SINE MIR 157 260 -2 208 205 0 0 chr17 14514105 14514144 -70924336 - MIR SINE MIR -138 70 32 2135 113 0 7 chr17 14514458 14514809 -70923671 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 14515094 14515115 -70923365 + AT_rich Low_complexity Low_complexity 1 21 0 193 56 28 28 chr17 14515184 14515220 -70923260 + (CATATA)n Simple_repeat Simple_repeat 1 36 0 193 208 21 21 chr17 14515269 14515317 -70923163 - L2 LINE L2 -2 3270 3223 426 177 0 0 chr17 14515541 14515620 -70922860 - AluJ/FRAM SINE Alu -15 297 219 212 174 38 98 chr17 14515632 14515764 -70922716 + (ATATG)n Simple_repeat Simple_repeat 5 128 0 406 144 17 56 chr17 14515764 14515944 -70922536 + (TATG)n Simple_repeat Simple_repeat 3 175 0 256 97 97 10 chr17 14516018 14516121 -70922359 + (TA)n Simple_repeat Simple_repeat 1 112 0 402 132 84 24 chr17 14516163 14516546 -70921934 + (TA)n Simple_repeat Simple_repeat 1 406 0 2820 19 0 0 chr17 14516782 14517089 -70921391 - AluYb8 SINE Alu -11 307 1 2095 114 0 0 chr17 14517634 14517957 -70920523 + AluSc SINE Alu 1 323 0 1182 166 9 19 chr17 14518170 14518381 -70920099 - AluJo SINE Alu -20 292 84 343 325 110 7 chr17 14519705 14519859 -70918621 + L3 LINE CR1 1302 1471 -106 195 341 78 23 chr17 14519984 14520113 -70918367 + MIR3 SINE MIR 15 150 -58 398 339 27 22 chr17 14520228 14520411 -70918069 - MIR3 SINE MIR -21 187 4 192 289 58 41 chr17 14520468 14520589 -70917891 - L2 LINE L2 -17 3255 3133 210 270 0 27 chr17 14521189 14521263 -70917217 + MIR SINE MIR 90 161 -101 225 65 0 0 chr17 14521638 14521669 -70916811 + (TG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr17 14521744 14521768 -70916712 + AT_rich Low_complexity Low_complexity 1 24 0 2479 57 10 3 chr17 14521768 14522068 -70916412 - AluY SINE Alu -7 304 3 2192 125 3 6 chr17 14522407 14522719 -70915761 + AluSx SINE Alu 1 311 -1 226 245 0 39 chr17 14522916 14523018 -70915462 + GA-rich Low_complexity Low_complexity 3 100 0 547 328 36 41 chr17 14523544 14523907 -70914573 - L2 LINE L2 -601 2713 2353 690 180 31 0 chr17 14523932 14524060 -70914420 + MER20 DNA MER1_type 70 201 -18 2195 118 0 3 chr17 14524061 14524358 -70914122 + AluSg SINE Alu 1 296 -14 21 36 0 0 chr17 14524457 14524485 -70913995 + AT_rich Low_complexity Low_complexity 1 28 0 2375 146 33 15 chr17 14524497 14524956 -70913524 - L1MA8 LINE L1 -22 6269 5803 930 352 56 43 chr17 14524967 14525732 -70912748 - L2 LINE L2 -1638 1676 898 2127 145 0 3 chr17 14525732 14526042 -70912438 + AluSx SINE Alu 1 309 -3 930 352 56 43 chr17 14526042 14526113 -70912367 - L2 LINE L2 -2416 898 829 213 108 0 0 chr17 14526215 14526252 -70912228 + (T)n Simple_repeat Simple_repeat 1 37 0 380 338 29 15 chr17 14526643 14526847 -70911633 - HAL1b LINE L1 -781 567 361 273 189 0 27 chr17 14527007 14527081 -70911399 + (TAA)n Simple_repeat Simple_repeat 2 73 0 433 248 0 0 chr17 14527545 14527646 -70910834 - MIR SINE MIR -6 256 156 540 246 29 29 chr17 14528554 14528692 -70909788 + L2 LINE L2 2009 2146 -1168 2466 159 21 21 chr17 14528746 14529179 -70909301 - Tigger2a DNA MER2_type 0 434 2 421 264 116 36 chr17 14529279 14529529 -70908951 + MARNA DNA Mariner 174 443 -143 822 163 67 161 chr17 14529827 14530188 -70908292 + MER57A LTR ERV1 77 403 0 437 279 35 35 chr17 14530194 14530366 -70908114 + MER57A-int LTR ERV1 6 177 -7360 586 183 0 35 chr17 14531349 14531574 -70906906 + L1PB4 LINE L1 6029 6249 0 720 115 34 33 chr17 14531464 14531898 -70906582 + GA-rich Low_complexity Low_complexity 1 434 0 1124 176 116 12 chr17 14531941 14532277 -70906203 + MER57A-int LTR ERV1 1078 1448 -3488 2570 49 0 0 chr17 14532489 14532793 -70905687 - AluY SINE Alu -7 304 1 390 161 86 43 chr17 14532934 14533027 -70905453 + MER34 LTR ERV1 141 237 -305 307 206 0 15 chr17 14533027 14533095 -70905385 + MER34 LTR ERV1 476 542 0 2261 100 13 7 chr17 14533193 14533503 -70904977 + AluSx SINE Alu 1 312 0 2000 224 64 84 chr17 14533541 14534613 -70903867 + MER57A-int LTR ERV1 1997 3047 -1889 2357 192 22 53 chr17 14534615 14534983 -70903497 + MER57-int LTR ERV1 5201 5542 -1995 2530 65 3 0 chr17 14534983 14535293 -70903187 + AluY SINE Alu 1 311 0 2357 192 22 53 chr17 14535293 14535565 -70902915 + MER57-int LTR ERV1 5542 5821 -1716 1157 257 34 68 chr17 14535721 14536296 -70902184 + MER57-int LTR ERV1 2450 6387 -1361 736 291 57 47 chr17 14536769 14537590 -70900890 + MER57-int LTR ERV1 6256 7147 -390 445 217 55 132 chr17 14537633 14537647 -70900833 + MER57A LTR ERV1 67 81 -322 2330 108 19 35 chr17 14537647 14538017 -70900463 + THE1B LTR MaLR 1 364 0 445 217 55 132 chr17 14538017 14538376 -70900104 + MER57A LTR ERV1 81 385 -18 190 344 52 31 chr17 14538470 14538566 -70899914 + MIR SINE MIR 63 160 -102 281 233 70 0 chr17 14539648 14539734 -70898746 + MIR SINE MIR 157 248 -14 237 244 0 110 chr17 14539784 14539866 -70898614 + MIR3 SINE MIR 10 83 -125 396 328 93 34 chr17 14540196 14540464 -70898016 + L1MC/D LINE L1 4771 5054 -1092 259 259 86 22 chr17 14540697 14540836 -70897644 + L1MC/D LINE L1 5318 5465 -2343 356 191 0 0 chr17 14541022 14541085 -70897395 + L1PB2 LINE L1 5718 5780 -371 359 165 10 29 chr17 14541099 14541202 -70897278 + (TA)n Simple_repeat Simple_repeat 1 101 0 2041 111 105 3 chr17 14541219 14541551 -70896929 + L1PB2 LINE L1 5783 6148 -3 2353 80 0 29 chr17 14541568 14541882 -70896598 + AluY SINE Alu 1 305 -6 207 283 159 35 chr17 14541937 14542050 -70896430 - MIR3 SINE MIR -47 161 35 253 349 92 46 chr17 14542344 14542496 -70895984 + MIR SINE MIR 38 196 -66 975 128 0 0 chr17 14542732 14542873 -70895607 + AluSg/x SINE Alu 170 310 0 380 195 13 13 chr17 14543163 14543240 -70895240 + MIR SINE MIR 54 130 -78 329 235 0 51 chr17 14543424 14543522 -70894958 + MER103 DNA DNA 54 146 -20 379 309 14 29 chr17 14543724 14543863 -70894617 + LTR33 LTR ERVL 103 239 -282 1682 158 51 46 chr17 14543870 14544243 -70894237 - THE1C LTR MaLR 0 375 1 9042 132 40 34 chr17 14544243 14545812 -70892668 - THE1C-int LTR MaLR 0 1580 3 1677 178 52 25 chr17 14545814 14546179 -70892301 - THE1C LTR MaLR 0 375 1 1094 234 105 47 chr17 14546242 14546486 -70891994 + Charlie4a DNA MER1_type 28 256 -1705 2173 124 3 0 chr17 14546486 14546792 -70891688 + AluSq SINE Alu 1 307 -6 1094 234 105 47 chr17 14546792 14546995 -70891485 + Charlie4a DNA MER1_type 256 501 -7 719 154 70 32 chr17 14547005 14547062 -70891418 + L1MB3 LINE L1 5328 5381 -797 231 88 0 0 chr17 14547062 14547096 -70891384 + (CA)n Simple_repeat Simple_repeat 2 35 0 719 154 70 32 chr17 14547096 14547194 -70891286 + L1MB3 LINE L1 5381 5489 -689 720 188 8 0 chr17 14547194 14547322 -70891158 + AluSq/x SINE Alu 1 129 -184 2158 99 27 3 chr17 14547803 14548117 -70890363 + AluSp SINE Alu 1 313 0 219 257 14 14 chr17 14548189 14548263 -70890217 + GA-rich Low_complexity Low_complexity 2 75 0 2467 181 43 2 chr17 14548350 14548858 -70889622 + L1MB3 LINE L1 5652 6180 -3 23 0 0 0 chr17 14548858 14548881 -70889599 + AT_rich Low_complexity Low_complexity 1 23 0 971 74 0 0 chr17 14549031 14549152 -70889328 + AluSc SINE Alu 180 300 -9 351 0 0 0 chr17 14549440 14549479 -70889001 + (CA)n Simple_repeat Simple_repeat 2 40 0 248 269 211 10 chr17 14549652 14549756 -70888724 - L2 LINE L2 -2 3270 3146 505 86 49 0 chr17 14549939 14550020 -70888460 + L1MB3 LINE L1 5884 5968 -215 195 162 0 0 chr17 14550118 14550155 -70888325 + (TTA)n Simple_repeat Simple_repeat 1 37 0 225 0 0 0 chr17 14550220 14550245 -70888235 + (CA)n Simple_repeat Simple_repeat 1 25 0 691 198 6 64 chr17 14550268 14550331 -70888149 - MIR SINE MIR -100 162 97 2217 87 35 3 chr17 14550331 14550620 -70887860 + AluSc SINE Alu 1 298 -11 691 198 6 64 chr17 14550620 14550713 -70887767 - MIR SINE MIR -165 97 15 304 307 13 0 chr17 14550896 14550971 -70887509 - MER5C DNA MER1_type -248 76 1 277 304 294 0 chr17 14551716 14551900 -70886580 + MIR SINE MIR 1 238 -24 330 263 0 0 chr17 14552010 14552143 -70886337 + (CCA)n Simple_repeat Simple_repeat 2 134 0 530 209 7 0 chr17 14552179 14552318 -70886162 + (CCA)n Simple_repeat Simple_repeat 2 141 0 459 330 66 19 chr17 14552707 14552919 -70885561 + MIR SINE MIR 25 246 -16 584 249 5 85 chr17 14552982 14553183 -70885297 - MER5A DNA MER1_type -2 187 3 2413 72 0 0 chr17 14553285 14553578 -70884902 + AluSc SINE Alu 1 293 -16 245 348 83 20 chr17 14553805 14554058 -70884422 + LTR16C LTR ERVL 155 423 -68 4584 173 51 23 chr17 14554069 14555563 -70882917 - L1MA5 LINE L1 0 7719 6180 207 69 0 0 chr17 14555563 14555592 -70882888 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2431 233 60 70 chr17 14555592 14556542 -70881938 - L1MA5 LINE L1 -4637 2928 1989 364 273 153 38 chr17 14556626 14556809 -70881671 + MIR SINE MIR 56 259 -3 2762 160 12 36 chr17 14558137 14558640 -70879840 + L1MB4 LINE L1 5632 6122 -58 2377 88 0 0 chr17 14558640 14558936 -70879544 + AluSq SINE Alu 1 296 -17 2762 160 12 36 chr17 14558936 14558994 -70879486 + L1MB4 LINE L1 6122 6180 0 206 129 0 0 chr17 14559121 14559152 -70879328 + L2 LINE L2 3263 3293 -20 195 129 0 0 chr17 14559249 14559280 -70879200 + (T)n Simple_repeat Simple_repeat 1 31 0 2146 109 7 3 chr17 14561035 14561329 -70877151 + AluSg SINE Alu 1 295 -15 840 318 30 17 chr17 14561624 14562027 -70876453 + L1MC4a LINE L1 5518 5925 -1883 25 31 0 0 chr17 14562218 14562250 -70876230 + AT_rich Low_complexity Low_complexity 1 32 0 236 30 30 0 chr17 14562321 14562354 -70876126 + (TCTA)n Simple_repeat Simple_repeat 2 35 0 2307 96 3 0 chr17 14562681 14562982 -70875498 - AluSp SINE Alu -11 302 1 2124 110 3 47 chr17 14563474 14563792 -70874688 + AluSx SINE Alu 1 304 -8 394 187 310 0 chr17 14563839 14563994 -70874486 - L2 LINE L2 0 3313 3111 1735 153 34 20 chr17 14564665 14564959 -70873521 + AluJo SINE Alu 2 299 -13 286 271 83 15 chr17 14565267 14565400 -70873080 - HAL1b LINE L1 -983 365 224 564 289 70 10 chr17 14566661 14566862 -70871618 + MIR SINE MIR 25 237 -25 2184 110 0 10 chr17 14567019 14567319 -70871161 + AluSq SINE Alu 1 297 -16 1476 145 121 0 chr17 14567822 14568104 -70870376 + L1MB3 LINE L1 5866 6181 -2 503 291 66 92 chr17 14568688 14568874 -70869606 + L1ME4a LINE L1 5516 5705 -416 2056 148 0 13 chr17 14568874 14569185 -70869295 + AluSx SINE Alu 1 307 -5 503 291 66 92 chr17 14569185 14569199 -70869281 + L1ME4a LINE L1 5705 5718 -403 1878 174 6 13 chr17 14569199 14569510 -70868970 + AluJb SINE Alu 1 309 -3 503 291 66 92 chr17 14569510 14569569 -70868911 + L1ME4a LINE L1 5718 5777 -344 2256 108 0 13 chr17 14569569 14569876 -70868604 + AluSg SINE Alu 1 303 -7 503 291 66 92 chr17 14569876 14570103 -70868377 + L1ME4a LINE L1 5777 5990 -131 2480 59 0 0 chr17 14570103 14570407 -70868073 + AluY SINE Alu 2 305 -6 503 291 66 92 chr17 14570407 14570481 -70867999 + L1ME4a LINE L1 5990 6064 -57 251 315 11 11 chr17 14570602 14570691 -70867789 + Charlie1 DNA MER1_type 1 89 -2672 2089 168 70 17 chr17 14570711 14571182 -70867298 + Charlie1 DNA MER1_type 1783 2278 -483 2716 148 49 10 chr17 14571182 14571361 -70867119 + L1MB3 LINE L1 5573 5744 -439 234 62 0 0 chr17 14571361 14571393 -70867087 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2716 148 49 10 chr17 14571393 14571727 -70866753 + L1MB3 LINE L1 5744 6106 -77 1973 102 10 33 chr17 14571740 14572044 -70866436 + AluSc SINE Alu 1 297 -12 202 143 29 0 chr17 14572048 14572083 -70866397 + GA-rich Low_complexity Low_complexity 1 36 0 264 122 0 0 chr17 14572084 14572125 -70866355 + (GGGA)n Simple_repeat Simple_repeat 2 42 0 2076 173 21 21 chr17 14572147 14572621 -70865859 + Charlie1 DNA MER1_type 2272 2745 -16 227 184 0 0 chr17 14572633 14572671 -70865809 + L2 LINE L2 3269 3306 -7 1142 266 61 18 chr17 14573480 14573874 -70864606 + LTR16C LTR ERVL 80 490 -1 612 238 60 24 chr17 14575046 14575214 -70863266 + FAM SINE Alu 1 174 -1 2308 93 33 0 chr17 14575439 14575741 -70862739 + AluSx SINE Alu 1 312 0 25 0 0 0 chr17 14575864 14575889 -70862591 + AT_rich Low_complexity Low_complexity 1 25 0 2277 113 3 10 chr17 14575945 14576255 -70862225 + AluSx SINE Alu 2 309 -3 2442 85 0 3 chr17 14576421 14576727 -70861753 + AluY SINE Alu 1 305 -6 605 298 70 26 chr17 14576792 14577178 -70861302 + L1ME4a LINE L1 5562 5964 -157 232 216 0 0 chr17 14577155 14577206 -70861274 - L1MC4 LINE L1 -1339 6703 6653 * 273 57 0 0 chr17 14577219 14577254 -70861226 + (TG)n Simple_repeat Simple_repeat 1 35 0 255 247 99 25 chr17 14577700 14577781 -70860699 + L2 LINE L2 3165 3251 -21 464 274 7 7 chr17 14578060 14578206 -70860274 + LTR16C LTR ERVL 345 490 -1 2303 105 3 0 chr17 14578223 14578529 -70859951 - AluSx SINE Alu -5 307 1 800 228 33 0 chr17 14579496 14579676 -70858804 + L1MB2 LINE L1 5640 5825 -346 1787 132 3 47 chr17 14579676 14579994 -70858486 + AluJo SINE Alu 1 305 0 2389 132 16 24 chr17 14580363 14580741 -70857739 + THE1C LTR MaLR 1 375 0 389 297 84 19 chr17 14580752 14580907 -70857573 + MIR3 SINE MIR 31 195 -13 2700 139 7 19 chr17 14581493 14581909 -70856571 + MSTC LTR MaLR 1 411 -17 431 365 75 11 chr17 14582062 14582328 -70856152 - L2 LINE L2 -348 2966 2684 1398 128 0 15 chr17 14582513 14582717 -70855763 - AluSg/x SINE Alu -14 296 96 2301 96 3 0 chr17 14583037 14583330 -70855150 + AluSg SINE Alu 1 294 -16 386 266 55 0 chr17 14583355 14583483 -70854997 + L1ME4a LINE L1 5695 5829 -292 509 254 61 87 chr17 14583519 14583596 -70854884 + L1ME4a LINE L1 5815 5892 -229 2186 120 0 7 chr17 14583596 14583904 -70854576 + AluSg SINE Alu 1 306 -4 509 254 61 87 chr17 14583904 14584137 -70854343 + L1ME4a LINE L1 5892 6117 -4 24 0 0 0 chr17 14584576 14584600 -70853880 + AT_rich Low_complexity Low_complexity 1 24 0 342 138 0 0 chr17 14584690 14584748 -70853732 + (GGGGA)n Simple_repeat Simple_repeat 4 61 0 1709 68 12 92 chr17 14584748 14584998 -70853482 + MER30 DNA MER1_type 1 230 0 209 299 17 86 chr17 14585318 14585435 -70853045 + MIR SINE MIR 33 141 -67 507 224 145 22 chr17 14585560 14585739 -70852741 - L2 LINE L2 0 3313 3113 296 248 137 20 chr17 14585744 14585897 -70852583 + L1ME3A LINE L1 5732 5902 -262 1144 183 15 10 chr17 14585904 14586106 -70852374 + AluJo SINE Alu 87 289 -23 312 247 71 0 chr17 14586133 14586218 -70852262 + L1MC4 LINE L1 6615 6705 -1337 285 114 0 0 chr17 14586228 14586272 -70852208 + L1ME3A LINE L1 5910 5953 -217 3152 157 13 50 chr17 14586885 14587037 -70851443 + MLT2B1 LTR ERVL 1 157 -363 1941 96 6 87 chr17 14587037 14587372 -70851108 + AluSp SINE Alu 1 308 -5 3152 157 13 50 chr17 14587372 14587759 -70850721 + MLT2B1 LTR ERVL 157 520 0 445 360 40 9 chr17 14588814 14589039 -70849441 - MIR SINE MIR -6 256 25 1783 93 93 50 chr17 14589061 14589339 -70849141 + AluSg SINE Alu 1 290 -20 1992 212 151 0 chr17 14589741 14590132 -70848348 + MLT2B2 LTR ERVL 5 472 -43 270 0 0 0 chr17 14590132 14590162 -70848318 + (TG)n Simple_repeat Simple_repeat 2 31 0 1992 212 151 0 chr17 14590162 14590214 -70848266 + MLT2B2 LTR ERVL 472 515 0 33 66 0 0 chr17 14590398 14590459 -70848021 + AT_rich Low_complexity Low_complexity 1 61 0 2069 129 0 7 chr17 14590659 14590961 -70847519 - AluSg SINE Alu -10 300 1 224 340 121 14 chr17 14591090 14591305 -70847175 + L2 LINE L2 2468 2705 -609 993 200 71 42 chr17 14591649 14591949 -70846531 + MLT1B LTR MaLR 1 256 -134 309 253 135 39 chr17 14592293 14592471 -70846009 - L2 LINE L2 0 3313 3119 828 239 150 69 chr17 14592527 14593006 -70845474 - MLT1G1 LTR MaLR 0 595 26 1019 325 123 22 chr17 14593102 14593751 -70844729 - L2 LINE L2 -351 2963 2249 2197 80 3 7 chr17 14593804 14594091 -70844389 - AluSg SINE Alu -24 286 1 214 305 226 11 chr17 14594298 14594488 -70843992 + L2 LINE L2 3083 3313 0 2572 63 0 0 chr17 14594816 14595118 -70843362 - AluY SINE Alu -9 302 1 798 296 125 16 chr17 14595313 14595736 -70842744 + Tigger8 DNA MER2_type 198 666 0 665 200 200 0 chr17 14595946 14596101 -70842379 - MER5A DNA MER1_type -2 187 2 438 301 0 48 chr17 14596108 14596232 -70842248 - MER5B DNA MER1_type -1 177 63 1669 170 24 0 chr17 14596232 14596526 -70841954 - AluJb SINE Alu -11 301 1 438 301 0 48 chr17 14596526 14596587 -70841893 - MER5B DNA MER1_type -115 63 1 2204 82 20 17 chr17 14596624 14596917 -70841563 + AluSp SINE Alu 2 295 -18 430 256 134 73 chr17 14597229 14597705 -70840775 - MER113 DNA MER1_type? -2 519 15 360 0 0 0 chr17 14598129 14598169 -70840311 + (TG)n Simple_repeat Simple_repeat 1 40 0 389 264 72 82 chr17 14601318 14601610 -70836870 + L1ME3A LINE L1 758 1046 -5159 371 281 0 89 chr17 14601610 14601756 -70836724 + L2 LINE L2 3181 3313 0 433 284 41 41 chr17 14601763 14602006 -70836474 + L1ME3A LINE L1 1047 1289 -4916 347 269 63 6 chr17 14602001 14602176 -70836304 + L1ME3A LINE L1 5326 5510 -2344 * 566 208 0 0 chr17 14602182 14602278 -70836202 + FLAM_A SINE Alu 6 101 -41 617 311 81 28 chr17 14602300 14602734 -70835746 + L1ME3A LINE L1 5497 5953 -286 22 56 0 0 chr17 14603019 14603055 -70835425 + AT_rich Low_complexity Low_complexity 1 36 0 238 238 48 12 chr17 14603055 14603139 -70835341 + HAL1 LINE L1 1602 1688 -819 302 247 129 87 chr17 14603520 14603749 -70834731 + L1MEd LINE L1 2111 2356 -4040 876 142 8 15 chr17 14603749 14603883 -70834597 + FLAM_C SINE Alu 1 133 0 302 247 129 87 chr17 14603883 14603940 -70834540 + L1MEd LINE L1 2356 2409 -3987 204 237 17 51 chr17 14603997 14604115 -70834365 + A-rich Low_complexity Low_complexity 2 115 0 709 216 9 0 chr17 14604194 14604343 -70834137 - FLAM_A SINE Alu 0 150 1 378 230 58 43 chr17 14604409 14604548 -70833932 - L1ME LINE L1 -317 5804 5664 2076 128 0 7 chr17 14605219 14605517 -70832963 + AluSg SINE Alu 1 296 -14 217 338 44 50 chr17 14606303 14606463 -70832017 + L2 LINE L2 3058 3216 -56 1948 174 58 0 chr17 14607102 14607447 -70831033 - MLT1A1 LTR MaLR 0 365 1 1806 214 118 16 chr17 14608729 14609464 -70829016 - L1ME1 LINE L1 -3 6163 5312 228 320 74 42 chr17 14609472 14609642 -70828838 + MIR3 SINE MIR 8 184 -24 242 324 169 7 chr17 14609719 14609855 -70828625 - MIR3 SINE MIR -13 195 38 2364 80 0 0 chr17 14611046 14611332 -70827148 + AluSc SINE Alu 1 286 -23 950 254 48 121 chr17 14611460 14612082 -70826398 + L2 LINE L2 2729 3313 0 2232 91 0 10 chr17 14612089 14612386 -70826094 - AluSq SINE Alu -19 294 1 290 26 26 0 chr17 14612445 14612484 -70825996 + (CATA)n Simple_repeat Simple_repeat 1 40 0 362 215 99 16 chr17 14612558 14612679 -70825801 - LTR67 LTR ERVL -1 556 426 401 338 0 15 chr17 14613179 14613312 -70825168 - MIR SINE MIR -55 207 77 435 272 256 5 chr17 14613346 14613537 -70824943 - MIR SINE MIR -22 240 2 213 94 0 0 chr17 14613688 14613720 -70824760 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2184 76 23 36 chr17 14614442 14614769 -70823711 + AluSq SINE Alu 1 313 0 184 139 0 28 chr17 14614930 14614966 -70823514 + L2 LINE L2 3264 3298 -15 973 250 70 13 chr17 14616413 14616725 -70821755 - MARNA DNA Mariner -88 498 169 837 276 172 37 chr17 14617063 14617498 -70820982 - MLT1J LTR MaLR -17 494 1 2326 109 0 0 chr17 14618211 14618522 -70819958 - AluY SINE Alu 0 311 1 21 71 0 0 chr17 14619906 14619948 -70818532 + AT_rich Low_complexity Low_complexity 1 42 0 231 339 60 42 chr17 14620238 14620792 -70817688 + L1M4 LINE L1 3340 3903 -2243 444 243 14 142 chr17 14620792 14620852 -70817628 - L2 LINE L2 -5 3308 3242 2099 113 0 14 chr17 14620852 14621144 -70817336 + AluSc SINE Alu 1 288 -21 444 243 14 142 chr17 14621144 14621379 -70817101 - L2 LINE L2 -71 3242 3051 7584 200 50 14 chr17 14621386 14622769 -70815711 + L1MB8 LINE L1 3421 4753 -1425 2266 119 0 0 chr17 14622769 14623064 -70815416 - AluSx SINE Alu -15 297 3 7584 200 50 14 chr17 14623064 14623257 -70815223 + L1MB8 LINE L1 4753 4938 -1240 1364 249 51 33 chr17 14623257 14623646 -70814834 + MSTD LTR MaLR 1 396 0 7584 200 50 14 chr17 14623646 14624730 -70813750 + L1MB8 LINE L1 4938 6178 0 7084 61 2 3 chr17 14624865 14625721 -70812759 + L1PA8 LINE L1 5318 6172 0 342 285 43 31 chr17 14625726 14625982 -70812498 + L1M4 LINE L1 4448 4706 -1440 2279 76 14 3 chr17 14626305 14626593 -70811887 - AluSc SINE Alu -18 291 1 248 276 0 0 chr17 14627090 14627148 -70811332 + L2 LINE L2 3214 3271 -1 1802 137 0 58 chr17 14628195 14628220 -70810260 - AluJo SINE Alu -3 309 284 198 0 0 0 chr17 14628220 14628242 -70810238 + (CAT)n Simple_repeat Simple_repeat 2 23 0 1802 137 0 58 chr17 14628242 14628544 -70809936 - AluJo SINE Alu -28 284 1 421 273 95 50 chr17 14628692 14629065 -70809415 + L2 LINE L2 2722 3077 -236 2130 120 3 0 chr17 14629065 14629357 -70809123 - AluSq SINE Alu -20 293 1 421 273 95 50 chr17 14629357 14629395 -70809085 + L2 LINE L2 3077 3112 -201 204 97 0 0 chr17 14629395 14629426 -70809054 + (TATG)n Simple_repeat Simple_repeat 2 32 0 421 273 95 50 chr17 14629426 14629544 -70808936 + L2 LINE L2 3112 3305 -8 573 197 67 91 chr17 14629928 14630136 -70808344 - MER102a DNA MER1_type -20 310 108 2370 86 3 10 chr17 14630152 14630456 -70808024 - AluSc SINE Alu -6 303 2 2294 251 57 56 chr17 14630818 14630951 -70807529 - L1ME3A LINE L1 -40 6130 5999 2286 116 0 0 chr17 14630951 14631262 -70807218 - AluSp SINE Alu -2 311 1 2294 251 57 56 chr17 14631262 14631661 -70806819 - L1ME3A LINE L1 -171 5999 5602 1375 221 83 94 chr17 14631661 14632040 -70806440 - MER34 LTR ERV1 -4 538 165 2471 80 0 0 chr17 14632040 14632339 -70806141 - AluSx SINE Alu -13 299 1 1375 221 83 94 chr17 14632339 14632503 -70805977 - MER34 LTR ERV1 -377 165 1 2294 251 57 56 chr17 14632503 14633218 -70805262 - L1ME3A LINE L1 -568 5602 4885 647 289 71 68 chr17 14633238 14633632 -70804848 - L3 LINE CR1 -622 955 561 1062 152 6 22 chr17 14634140 14634318 -70804162 - MER58B DNA MER1_type 0 341 167 228 220 121 98 chr17 14635090 14635263 -70803217 + MLT1L LTR MaLR 1 177 -438 306 283 78 39 chr17 14635327 14635507 -70802973 + MLT1L LTR MaLR 205 391 -224 509 290 0 0 chr17 14636183 14636307 -70802173 + MER94 DNA DNA 1 124 -10 1865 176 8 17 chr17 14638293 14638652 -70799828 - L1MB5 LINE L1 -7 6167 5812 7061 69 46 0 chr17 14638659 14639819 -70798661 - L1PA8 LINE L1 0 6172 4991 1356 158 4 23 chr17 14639819 14640085 -70798395 - L1MB5 LINE L1 -347 5827 5567 22 35 0 0 chr17 14640132 14640161 -70798319 + AT_rich Low_complexity Low_complexity 1 29 0 1622 184 39 39 chr17 14641807 14642171 -70796309 + MLT1A1 LTR MaLR 1 364 -1 3798 148 22 53 chr17 14642200 14642937 -70795543 + L1MC1 LINE L1 5615 6328 -5 485 313 129 17 chr17 14642948 14643400 -70795080 + L1ME LINE L1 5319 5820 -301 7384 49 0 1 chr17 14643410 14644452 -70794028 + L1PA7 LINE L1 5112 6152 -2 302 262 73 37 chr17 14645776 14645940 -70792540 - MIR3 SINE MIR -6 202 33 272 255 29 59 chr17 14645969 14646071 -70792409 + MER5A DNA MER1_type 16 114 -75 603 249 50 33 chr17 14646124 14646262 -70792218 - MER5A DNA MER1_type 0 189 46 1568 199 51 14 chr17 14646262 14646614 -70791866 + MLT1A1 LTR MaLR 1 365 0 603 249 50 33 chr17 14646614 14646656 -70791824 - MER5A DNA MER1_type -143 46 6 201 293 158 15 chr17 14647022 14647155 -70791325 - MIR3 SINE MIR -29 179 28 2359 113 105 10 chr17 14647800 14648191 -70790289 + MSTA LTR MaLR 1 428 0 608 189 39 128 chr17 14648630 14648821 -70789659 + HAL1 LINE L1 928 1088 -1419 2113 124 3 0 chr17 14648821 14649119 -70789361 - AluSq SINE Alu -12 301 3 608 189 39 128 chr17 14649119 14649208 -70789272 + HAL1 LINE L1 1088 1183 -1324 441 230 39 34 chr17 14649471 14649649 -70788831 + MER113 DNA MER1_type? 1 179 -342 1470 200 128 19 chr17 14649681 14650041 -70788439 + MLT1F1 LTR MaLR 169 567 0 647 255 53 85 chr17 14650047 14650288 -70788192 + MER113 DNA MER1_type? 209 439 -82 2197 113 3 7 chr17 14650288 14650590 -70787890 - AluSq SINE Alu -7 306 6 647 255 53 85 chr17 14650590 14650666 -70787814 + MER113 DNA MER1_type? 439 516 -5 407 273 35 14 chr17 14650703 14650846 -70787634 + MIR3 SINE MIR 54 199 -9 25 31 0 0 chr17 14651758 14651790 -70786690 + AT_rich Low_complexity Low_complexity 1 32 0 1712 179 23 10 chr17 14651922 14652223 -70786257 + AluJo SINE Alu 1 305 -7 435 337 103 0 chr17 14653293 14653468 -70785012 + MER91A DNA MER1_type 1 193 -3 2435 144 12 27 chr17 14653517 14653919 -70784561 + MSTB LTR MaLR 1 396 -30 2372 84 7 3 chr17 14653919 14654228 -70784252 - AluSx SINE Alu -2 310 1 261 33 0 0 chr17 14654229 14654259 -70784221 + MSTB LTR MaLR 382 411 -17 2356 105 3 3 chr17 14656351 14656657 -70781823 + AluSx SINE Alu 1 306 -6 382 229 12 0 chr17 14656741 14656824 -70781656 + MER5A DNA MER1_type 26 109 -80 233 314 0 0 chr17 14656919 14657005 -70781475 + GA-rich Low_complexity Low_complexity 3 88 0 313 290 30 91 chr17 14657329 14657560 -70780920 + HAL1 LINE L1 1 217 -2290 390 291 33 14 chr17 14657612 14657825 -70780655 + HAL1 LINE L1 1687 1903 -604 1016 271 108 85 chr17 14657914 14658625 -70779855 + HAL1 LINE L1 308 1055 -1452 2161 126 3 3 chr17 14658625 14658934 -70779546 + AluSg SINE Alu 2 310 0 1016 271 108 85 chr17 14658934 14659346 -70779134 + HAL1 LINE L1 1055 1456 -1051 1195 265 21 13 chr17 14659356 14659729 -70778751 + HAL1 LINE L1 1528 1903 -604 1940 137 0 0 chr17 14659767 14660044 -70778436 - AluSx SINE Alu -8 304 28 440 259 130 78 chr17 14660063 14660500 -70777980 + HAL1 LINE L1 2042 2501 -6 435 204 8 15 chr17 14660514 14660646 -70777834 + GA-rich Low_complexity Low_complexity 2 132 0 432 321 67 5 chr17 14661300 14661493 -70776987 + MIR SINE MIR 14 218 -44 2208 103 3 28 chr17 14661514 14661834 -70776646 + AluSp SINE Alu 1 312 -1 339 322 17 40 chr17 14662378 14662555 -70775925 - MIR SINE MIR -70 192 20 206 237 0 88 chr17 14663618 14663732 -70774748 + A-rich Low_complexity Low_complexity 5 108 0 849 210 5 11 chr17 14665065 14665258 -70773222 + MER33 DNA MER1_type 1 185 -88 725 193 77 11 chr17 14665268 14665449 -70773031 + MER33 DNA MER1_type 144 336 -27 504 335 24 5 chr17 14665749 14665961 -70772519 + MIR SINE MIR 9 224 -38 901 139 58 52 chr17 14665982 14666154 -70772326 - MLT2C2 LTR ERVL -40 424 252 623 105 0 0 chr17 14666154 14666240 -70772240 - AluY SINE Alu -15 296 211 1501 138 53 0 chr17 14666240 14666486 -70771994 - MLT2C2 LTR ERVL -205 259 1 342 304 72 56 chr17 14666629 14667043 -70771437 - L2 LINE L2 -10 3303 2883 261 210 0 0 chr17 14667539 14667601 -70770879 + (TG)n Simple_repeat Simple_repeat 1 62 0 2380 93 3 10 chr17 14667936 14668246 -70770234 + AluSx SINE Alu 1 308 -4 867 283 33 39 chr17 14668864 14669284 -70769196 - MLT1K LTR MaLR -27 561 76 524 287 28 0 chr17 14669710 14669853 -70768627 - MER103 DNA DNA -2 164 18 1188 229 77 61 chr17 14669940 14670347 -70768133 + HAL1 LINE L1 1571 1970 -537 198 0 0 0 chr17 14670347 14670369 -70768111 + (TA)n Simple_repeat Simple_repeat 2 23 0 2082 77 0 0 chr17 14670370 14670618 -70767862 - AluY SINE Alu -25 286 39 1188 229 77 61 chr17 14670618 14670718 -70767762 + HAL1 LINE L1 1969 2088 -419 332 324 68 52 chr17 14670776 14671262 -70767218 + MLT1H LTR MaLR 15 549 0 226 189 90 72 chr17 14671262 14671373 -70767107 + HAL1 LINE L1 2191 2303 -204 232 274 0 27 chr17 14671373 14671384 -70767096 + GA-rich Low_complexity Low_complexity 2 12 -60 2638 58 0 7 chr17 14671384 14671694 -70766786 + AluY SINE Alu 1 308 -3 232 274 0 27 chr17 14671694 14671755 -70766725 + GA-rich Low_complexity Low_complexity 12 72 0 360 287 69 76 chr17 14671919 14672077 -70766403 + HAL1 LINE L1 1074 1231 -1276 2419 57 0 10 chr17 14672077 14672376 -70766104 - AluY SINE Alu -15 296 1 360 287 69 76 chr17 14672376 14672492 -70765988 + HAL1 LINE L1 1231 1346 -1161 373 322 71 19 chr17 14672677 14672944 -70765536 + HAL1 LINE L1 1524 1804 -703 411 192 64 16 chr17 14673082 14673207 -70765273 + HAL1 LINE L1 2023 2153 -354 2376 89 0 10 chr17 14673306 14673609 -70764871 - AluSg SINE Alu -9 301 2 515 298 82 20 chr17 14673763 14674055 -70764425 + HAL1 LINE L1 2193 2502 -5 570 280 115 50 chr17 14675751 14675838 -70762642 + MLT1J2 LTR MaLR 69 149 -301 192 97 0 0 chr17 14675838 14675869 -70762611 + (TG)n Simple_repeat Simple_repeat 2 32 0 570 280 115 50 chr17 14675869 14676138 -70762342 + MLT1J2 LTR MaLR 149 448 -2 264 30 0 0 chr17 14676508 14676541 -70761939 + (TG)n Simple_repeat Simple_repeat 2 34 0 389 277 65 26 chr17 14677587 14677742 -70760738 - MLT1L LTR MaLR -6 609 449 2306 107 0 0 chr17 14678573 14678871 -70759609 + AluSc SINE Alu 1 298 -11 2057 79 0 72 chr17 14679389 14679725 -70758755 - AluY SINE Alu 0 314 1 1256 112 28 0 chr17 14680213 14680392 -70758088 - L1PA13 LINE L1 -7 6156 5973 595 81 69 0 chr17 14680392 14680479 -70758001 + L1P4 LINE L1 5513 5605 -558 665 130 0 0 chr17 14680627 14680727 -70757753 + L1P4 LINE L1 5608 5707 -461 2298 94 7 0 chr17 14681296 14681594 -70756886 + AluSx SINE Alu 2 301 -11 2309 113 3 0 chr17 14681594 14681979 -70756501 + AluSp SINE Alu 1 386 0 2487 148 56 2 chr17 14681993 14682406 -70756074 - LTR47A LTR ERVL -17 435 1 4277 152 64 54 chr17 14682413 14683881 -70754599 - LTR49-int LTR ERV1 -687 6071 4569 10024 158 50 21 chr17 14683896 14685287 -70753193 - LTR49-int LTR ERV1 -1905 4853 3504 3795 148 68 42 chr17 14685287 14685994 -70752486 + LTR8A LTR ERV1 3 727 0 10024 158 50 21 chr17 14685994 14686380 -70752100 - LTR49-int LTR ERV1 -3254 3504 3046 2090 107 3 32 chr17 14686380 14686689 -70751791 - AluSp SINE Alu -13 300 1 10024 158 50 21 chr17 14686689 14686795 -70751685 - LTR49-int LTR ERV1 -3712 3046 2945 940 104 8 0 chr17 14686827 14686961 -70751519 - AluSp/q SINE Alu -4 309 175 1449 160 79 49 chr17 14686961 14687458 -70751022 - LTR49-int LTR ERV1 -2770 3561 1181 493 188 0 0 chr17 14687485 14687582 -70750898 - LTR49-int LTR ERV1 -3220 2726 854 * 1056 229 23 36 chr17 14687575 14687883 -70750597 - LTR49-int LTR ERV1 -4060 2271 1984 268 286 32 64 chr17 14687920 14687990 -70750490 - L1M4 LINE L1 -1635 4511 4440 1995 114 4 4 chr17 14687990 14688310 -70750170 - AluSg SINE Alu 0 320 1 268 286 32 64 chr17 14688310 14688358 -70750122 - L1M4 LINE L1 -1706 4440 4392 198 0 0 0 chr17 14688358 14688380 -70750100 + (TG)n Simple_repeat Simple_repeat 2 23 0 268 286 32 64 chr17 14688380 14688479 -70750001 - L1M4 LINE L1 -1754 4392 4299 1011 266 145 18 chr17 14688495 14688894 -70749586 - MLT1J2 LTR MaLR 0 450 1 345 275 60 57 chr17 14689084 14689470 -70749010 - L1M4 LINE L1 -2207 3939 3553 27777 59 3 6 chr17 14689564 14693924 -70744556 - L1PA6 LINE L1 -1 6468 2124 800 157 0 0 chr17 14693922 14694043 -70744437 - L1PA6 LINE L1 -6331 130 10 * 2815 227 67 47 chr17 14694051 14694746 -70743734 - L1ME1 LINE L1 -63 6103 5358 1958 133 0 20 chr17 14694746 14694907 -70743573 - AluY SINE Alu -15 296 142 279 0 0 0 chr17 14694907 14694938 -70743542 + (TA)n Simple_repeat Simple_repeat 2 32 0 1958 133 0 20 chr17 14694938 14695076 -70743404 - AluY SINE Alu -169 142 3 2815 227 67 47 chr17 14695076 14695479 -70743001 - L1ME1 LINE L1 -808 5358 4965 766 238 34 55 chr17 14695499 14695678 -70742802 - MIR SINE MIR -18 244 70 2524 60 3 0 chr17 14695678 14695980 -70742500 + AluY SINE Alu 1 303 -8 766 238 34 55 chr17 14695980 14696035 -70742445 - MIR SINE MIR -192 70 15 354 262 84 5 chr17 14696081 14696295 -70742185 - L1ME1 LINE L1 -2838 3308 3078 273 284 74 78 chr17 14696557 14696828 -70741652 + L1MC4a LINE L1 6530 6799 -1009 293 331 28 48 chr17 14698299 14698444 -70740036 + L2 LINE L2 2909 3050 -222 1678 148 7 14 chr17 14698524 14698808 -70739672 + Tigger2 DNA MER2_type 1 282 -2436 765 162 8 0 chr17 14698809 14698926 -70739554 + AluSq/x SINE Alu 2 119 -194 2732 162 32 4 chr17 14698954 14699418 -70739062 + Tigger2 DNA MER2_type 268 744 -1974 1161 148 22 0 chr17 14699539 14699722 -70738758 - MER50 LTR ERV1 -12 722 536 1290 101 11 0 chr17 14699740 14699919 -70738561 - AluSg/x SINE Alu 0 310 130 3080 153 24 22 chr17 14699920 14700471 -70738009 - MER50 LTR ERV1 -182 552 1 1617 157 4 15 chr17 14700496 14700757 -70737723 + Tigger2 DNA MER2_type 2451 2708 -10 273 103 0 0 chr17 14701119 14701158 -70737322 + (TCCC)n Simple_repeat Simple_repeat 4 42 0 332 236 17 28 chr17 14701161 14701339 -70737141 + CT-rich Low_complexity Low_complexity 4 179 0 323 192 13 0 chr17 14701388 14701466 -70737014 + CT-rich Low_complexity Low_complexity 2 80 0 784 135 5 43 chr17 14701483 14701668 -70736812 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 340 277 145 32 chr17 14702029 14702278 -70736202 - L1ME LINE L1 -459 5662 5386 343 281 111 50 chr17 14702316 14703034 -70735446 - L1ME LINE L1 -795 5351 4590 30 45 0 0 chr17 14703173 14703217 -70735263 + AT_rich Low_complexity Low_complexity 1 44 0 2343 104 0 0 chr17 14703761 14704070 -70734410 - AluSg1 SINE Alu 0 309 1 28 0 0 0 chr17 14704293 14704321 -70734159 + AT_rich Low_complexity Low_complexity 1 28 0 308 154 0 0 chr17 14705309 14705361 -70733119 - L1MB3 LINE L1 -1 6182 6131 241 123 31 0 chr17 14705361 14705426 -70733054 + (TA)n Simple_repeat Simple_repeat 2 68 0 2035 179 16 44 chr17 14705433 14705456 -70733024 - L1MB3 LINE L1 -17 6166 6144 2091 114 3 7 chr17 14705456 14705754 -70732726 - AluY SINE Alu -14 297 1 2035 179 16 44 chr17 14705754 14706079 -70732401 - L1MB3 LINE L1 -39 6144 5830 2591 71 0 0 chr17 14706079 14706390 -70732090 - AluY SINE Alu 0 311 1 2035 179 16 44 chr17 14706390 14706471 -70732009 - L1MB3 LINE L1 -353 5830 5748 1293 159 0 0 chr17 14706565 14706754 -70731726 - MER5A DNA MER1_type 0 189 1 1224 15 0 0 chr17 14708113 14708244 -70730236 - L1PA5 LINE L1 -9 6145 6015 2887 6 0 0 chr17 14709294 14709605 -70728875 - AluYa5 SINE Alu 0 311 1 251 292 0 15 chr17 14709831 14709896 -70728584 - L2 LINE L2 0 3313 3250 2131 188 27 17 chr17 14709920 14710325 -70728155 - MLT2D LTR ERVL 0 414 6 585 229 21 7 chr17 14710330 14710470 -70728010 - MER5B DNA MER1_type -35 143 2 456 316 72 8 chr17 14710470 14710718 -70727762 - L2 LINE L2 -51 3262 2999 351 0 0 0 chr17 14710863 14710902 -70727578 + (CA)n Simple_repeat Simple_repeat 2 40 0 395 136 21 78 chr17 14711344 14711535 -70726945 + (TA)n Simple_repeat Simple_repeat 1 180 0 1210 174 17 17 chr17 14711564 14711805 -70726675 - L1MC3 LINE L1 -21 7764 7524 2291 106 23 0 chr17 14712408 14712711 -70725769 - AluSg SINE Alu 0 310 1 310 321 36 0 chr17 14712729 14712841 -70725639 - L2 LINE L2 -3 3269 3154 290 312 29 59 chr17 14713293 14713463 -70725017 + MIR SINE MIR 86 250 -12 464 60 30 0 chr17 14714269 14714336 -70724144 + (TTTTC)n Simple_repeat Simple_repeat 2 70 0 262 299 0 26 chr17 14715162 14715239 -70723241 + L2 LINE L2 3232 3306 -7 228 203 149 40 chr17 14715307 14715381 -70723099 - L3b LINE CR1 -4 1579 1498 1977 123 10 17 chr17 14715724 14716049 -70722431 + AluSq SINE Alu 1 313 0 26 64 0 0 chr17 14716470 14716517 -70721963 + AT_rich Low_complexity Low_complexity 1 47 0 2363 143 43 13 chr17 14716676 14716693 -70721787 - MER57A LTR ERV1 0 403 388 2227 112 13 0 chr17 14716693 14716998 -70721482 + AluSc SINE Alu 1 309 0 2363 143 43 13 chr17 14716998 14717371 -70721109 - MER57A LTR ERV1 -15 388 1 273 256 31 78 chr17 14718003 14718061 -70720419 - L1ME LINE L1 -454 5667 5608 2312 85 0 0 chr17 14718061 14718370 -70720110 - AluY SINE Alu 0 309 1 273 256 31 78 chr17 14718370 14718439 -70720041 - L1ME LINE L1 -513 5608 5545 2312 82 0 57 chr17 14719920 14719953 -70718527 - AluSx SINE Alu 0 312 279 414 0 0 0 chr17 14719953 14719999 -70718481 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2312 82 0 57 chr17 14719999 14720296 -70718184 - AluSx SINE Alu -33 279 1 333 338 83 30 chr17 14720768 14721034 -70717446 + MLT1L LTR MaLR 1 280 -335 2410 101 0 0 chr17 14721056 14721362 -70717118 - AluSx SINE Alu -6 306 1 2167 84 0 25 chr17 14722639 14722981 -70715499 + AluSg SINE Alu 2 336 0 235 263 97 42 chr17 14723742 14723959 -70714521 - L1ME4a LINE L1 -16 6105 5877 317 223 150 86 chr17 14724033 14724253 -70714227 - L1ME4a LINE L1 -382 5739 5506 27 49 0 0 chr17 14724262 14724303 -70714177 + AT_rich Low_complexity Low_complexity 1 41 0 2164 83 31 3 chr17 14724340 14724630 -70713850 - AluY SINE Alu -13 298 1 21 36 0 0 chr17 14724707 14724735 -70713745 + AT_rich Low_complexity Low_complexity 1 28 0 1960 132 3 0 chr17 14725040 14725329 -70713151 - AluSx SINE Alu 0 312 23 885 236 16 68 chr17 14725704 14726014 -70712466 + L2 LINE L2 3020 3313 0 1915 149 0 32 chr17 14726302 14726610 -70711870 - AluJb SINE Alu -13 299 2 371 320 80 20 chr17 14727545 14727745 -70710735 + L3 LINE CR1 1347 1558 -19 2195 123 3 0 chr17 14728019 14728327 -70710153 + AluSx SINE Alu 1 309 -3 1800 217 50 28 chr17 14728359 14728796 -70709684 - MLT1C LTR MaLR 0 467 41 2560 151 51 12 chr17 14728796 14729206 -70709274 - MSTB LTR MaLR 0 426 1 9933 156 6 41 chr17 14729206 14730572 -70707908 - MSTB-int LTR MaLR 0 1651 356 2276 114 0 0 chr17 14730572 14730879 -70707601 - AluY SINE Alu -4 307 1 9933 156 6 41 chr17 14730879 14731223 -70707257 - MSTB-int LTR MaLR -1295 356 1 2345 188 28 26 chr17 14731223 14731648 -70706832 - MSTB LTR MaLR 0 426 1 1800 217 50 28 chr17 14731648 14731665 -70706815 - MLT1C LTR MaLR -425 42 1 251 300 11 11 chr17 14732230 14732320 -70706160 + MLT1F1 LTR MaLR 136 225 -324 388 250 62 0 chr17 14732407 14732534 -70705946 + MLT1F1 LTR MaLR 327 409 0 730 250 7 7 chr17 14732680 14732832 -70705648 + MER5A DNA MER1_type 38 189 0 301 176 0 0 chr17 14732926 14732977 -70705503 - MER5B DNA MER1_type -126 52 2 2329 62 3 10 chr17 14733222 14733512 -70704968 + AluY SINE Alu 1 288 -23 871 149 8 15 chr17 14733940 14734100 -70704380 - FLAM_C SINE Alu 0 159 1 212 332 121 30 chr17 14734104 14734336 -70704144 + L2 LINE L2 2149 2401 -913 583 264 57 44 chr17 14735820 14736135 -70702345 - L1ME4a LINE L1 0 6121 5803 2486 75 3 0 chr17 14736376 14736681 -70701799 - AluY SINE Alu -5 306 1 370 251 120 23 chr17 14737074 14737249 -70701231 + L1MB8 LINE L1 5986 6177 -1 295 310 54 22 chr17 14737572 14737713 -70700767 + MIR3 SINE MIR 63 208 0 2265 103 13 0 chr17 14738006 14738307 -70700173 - AluSp SINE Alu -8 305 1 2114 122 3 25 chr17 14738689 14739008 -70699472 + AluSx SINE Alu 1 312 0 243 0 0 0 chr17 14740036 14740063 -70698417 + (CA)n Simple_repeat Simple_repeat 2 28 0 317 208 14 28 chr17 14740521 14740593 -70697887 - L2 LINE L2 -1 3271 3201 5316 147 147 44 chr17 14740931 14741132 -70697348 + Tigger3b DNA MER2_type 1 180 -2848 2176 91 3 46 chr17 14741132 14741439 -70697041 + AluSp SINE Alu 2 295 -18 5316 147 147 44 chr17 14741439 14741467 -70697013 + Tigger3b DNA MER2_type 180 204 -2824 279 0 0 0 chr17 14741467 14741498 -70696982 + (CA)n Simple_repeat Simple_repeat 2 32 0 5316 147 147 44 chr17 14741498 14742007 -70696473 + Tigger3b DNA MER2_type 204 659 -2369 2238 84 10 13 chr17 14742007 14742306 -70696174 + AluSc SINE Alu 1 298 -11 5316 147 147 44 chr17 14742306 14742681 -70695799 + Tigger3b DNA MER2_type 659 1231 0 2271 148 81 26 chr17 14743479 14743640 -70694840 - MER39 LTR ERV1 -2 705 554 2371 92 0 0 chr17 14743640 14743935 -70694545 - AluSg SINE Alu -15 295 1 2271 148 81 26 chr17 14743935 14744417 -70694063 - MER39 LTR ERV1 -153 554 4 777 254 150 52 chr17 14745102 14745448 -70693032 - L2 LINE L2 -1 3312 2933 433 324 37 0 chr17 14745481 14745617 -70692863 - L2 LINE L2 -529 2785 2645 187 134 59 34 chr17 14745967 14746086 -70692394 + (TA)n Simple_repeat Simple_repeat 2 123 0 192 40 0 0 chr17 14746086 14746111 -70692369 + (GA)n Simple_repeat Simple_repeat 2 26 0 1231 217 29 53 chr17 14747480 14747983 -70690497 + L1M4 LINE L1 2289 2856 -3290 587 113 12 0 chr17 14747983 14748063 -70690417 + AluS SINE Alu 220 300 -12 269 278 59 25 chr17 14748064 14748256 -70690224 - L1MC/D LINE L1 -286 5884 5724 2118 131 0 0 chr17 14749690 14749995 -70688485 + AluSq SINE Alu 1 305 -8 461 289 19 19 chr17 14750251 14750407 -70688073 - MIR SINE MIR 0 262 107 225 217 17 0 chr17 14750915 14750975 -70687505 + (TA)n Simple_repeat Simple_repeat 1 61 0 267 235 78 39 chr17 14751085 14751187 -70687293 - MLT1I LTR MaLR -20 389 284 2490 35 0 0 chr17 14751207 14751527 -70686953 + AluY SINE Alu 1 320 0 207 0 0 0 chr17 14752037 14752060 -70686420 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3547 164 55 36 chr17 14753727 14754465 -70684015 + LTR1B LTR ERV1 1 771 -14 1972 125 69 19 chr17 14754474 14754835 -70683645 + L1MB3 LINE L1 5805 6183 0 1989 168 116 13 chr17 14755781 14756162 -70682318 + MER83 LTR ERV1 23 442 -6 188 317 0 0 chr17 14756766 14756826 -70681654 + L2 LINE L2 2590 2649 -665 30 27 0 0 chr17 14756894 14756931 -70681549 + AT_rich Low_complexity Low_complexity 1 37 0 31761 113 13 58 chr17 14756935 14763397 -70675083 + L1PA8 LINE L1 12 6172 0 2157 108 162 7 chr17 14763561 14763995 -70674485 + MER4B LTR ERV1 5 788 -84 301 54 0 0 chr17 14763995 14764032 -70674448 + MER4A LTR ERV1 628 664 0 261 0 0 0 chr17 14764067 14764096 -70674384 + (TG)n Simple_repeat Simple_repeat 2 30 0 3090 113 21 0 chr17 14764261 14764686 -70673794 + MER57B LTR ERV1 1 434 0 456 299 176 49 chr17 14764707 14765115 -70673365 + L2 LINE L2 2812 3271 -1 1054 294 83 41 chr17 14765141 14765366 -70673114 + L2 LINE L2 2429 2643 -670 309 26 0 0 chr17 14765366 14765404 -70673076 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2113 95 0 11 chr17 14765408 14765693 -70672787 - AluSx SINE Alu -30 282 1 1054 294 83 41 chr17 14765693 14766313 -70672167 + L2 LINE L2 2645 3313 0 239 330 79 49 chr17 14766322 14766525 -70671955 + MIR SINE MIR 1 209 -53 216 200 0 0 chr17 14766739 14766779 -70671701 + GA-rich Low_complexity Low_complexity 3 42 0 299 295 87 51 chr17 14767790 14767948 -70670532 - L1ME4a LINE L1 -123 5998 5847 2350 90 0 3 chr17 14767948 14768248 -70670232 + AluSq SINE Alu 5 303 -10 299 295 87 51 chr17 14768248 14768482 -70669998 - L1ME4a LINE L1 -274 5847 5592 344 308 150 23 chr17 14768560 14768826 -70669654 - L1ME4a LINE L1 -1082 5064 4765 360 278 35 42 chr17 14768849 14768993 -70669487 - L2 LINE L2 -5 3267 3125 472 309 198 45 chr17 14769071 14769849 -70668631 - L2 LINE L2 -561 2753 2095 2449 95 0 0 chr17 14769849 14770155 -70668325 + AluSx SINE Alu 1 306 -6 472 309 198 45 chr17 14770155 14770330 -70668150 - L2 LINE L2 -1219 2095 1948 192 77 0 0 chr17 14770330 14770356 -70668124 + (TTG)n Simple_repeat Simple_repeat 2 27 0 472 309 198 45 chr17 14770356 14770668 -70667812 - L2 LINE L2 -1366 1948 1293 305 318 16 51 chr17 14770729 14770944 -70667536 - L1 LINE L1 -1419 4727 4519 2611 117 14 3 chr17 14770950 14771310 -70667170 - THE1B LTR MaLR 0 364 1 755 212 0 27 chr17 14772047 14772193 -70666287 - FLAM_A SINE Alu 0 142 1 2140 92 0 76 chr17 14772515 14772843 -70665637 - AluSq SINE Alu -10 303 1 22 0 0 0 chr17 14772852 14772874 -70665606 + AT_rich Low_complexity Low_complexity 1 22 0 1231 41 0 0 chr17 14773133 14773279 -70665201 - AluY SINE Alu -10 301 156 1827 173 0 7 chr17 14773809 14774109 -70664371 - AluJb SINE Alu -14 298 1 239 100 0 0 chr17 14774205 14774235 -70664245 - U6 snRNA snRNA -77 30 1 253 284 30 0 chr17 14774573 14774640 -70663840 + MLT1L LTR MaLR 219 287 -328 2840 181 29 64 chr17 14774695 14775247 -70663233 - L1MC2 LINE L1 0 6344 5819 2189 91 0 0 chr17 14775247 14775523 -70662957 - AluSp SINE Alu -1 312 37 2840 181 29 64 chr17 14775523 14775654 -70662826 - L1MC2 LINE L1 -525 5819 5685 578 285 106 12 chr17 14775656 14775912 -70662568 + MLT1L LTR MaLR 329 608 -7 527 349 35 23 chr17 14776623 14776881 -70661599 - L3 LINE CR1 -236 1341 1081 932 265 27 31 chr17 14776892 14777186 -70661294 - LTR16C LTR ERVL 0 491 199 218 145 16 48 chr17 14777380 14777442 -70661038 + (TTTA)n Simple_repeat Simple_repeat 3 62 0 250 188 62 16 chr17 14778742 14778806 -70659674 + MLT1I LTR MaLR 319 385 -24 1629 173 83 67 chr17 14779175 14779621 -70658859 + MLT1C LTR MaLR 1 453 -14 459 230 71 8 chr17 14780483 14780609 -70657871 + MIR SINE MIR 86 219 -43 236 348 0 22 chr17 14780737 14780842 -70657638 - MIR SINE MIR -63 145 49 1868 162 7 10 chr17 14780901 14781210 -70657270 + AluJb SINE Alu 5 312 0 649 162 40 29 chr17 14782716 14782889 -70655591 - L1MB3 LINE L1 -2 6181 6007 1292 161 56 14 chr17 14782919 14783015 -70655465 - L1MB2 LINE L1 -149 6022 5931 505 123 0 12 chr17 14783015 14783096 -70655384 - MADE1 DNA Mariner 0 80 1 1292 161 56 14 chr17 14783096 14783285 -70655195 - L1MB2 LINE L1 -240 5931 5725 574 329 25 16 chr17 14783903 14784155 -70654325 - MIR SINE MIR -6 256 3 377 202 17 17 chr17 14785522 14785641 -70652839 + CT-rich Low_complexity Low_complexity 1 119 0 526 131 84 82 chr17 14785996 14786189 -70652291 + MER21B LTR ERV1 680 861 -2 1969 239 18 22 chr17 14786943 14787450 -70651030 - LTR31 LTR ERV1 0 619 115 2122 129 0 3 chr17 14787851 14788161 -70650319 - AluSc SINE Alu 0 309 1 415 200 29 7 chr17 14788428 14788568 -70649912 + (TG)n Simple_repeat Simple_repeat 2 144 0 430 339 107 43 chr17 14788725 14789285 -70649195 + L3 LINE CR1 981 1576 -1 185 343 86 29 chr17 14790503 14790608 -70647872 + L2 LINE L2 3154 3264 -8 217 292 0 0 chr17 14791318 14791366 -70647114 + L2 LINE L2 3185 3232 -40 405 0 0 0 chr17 14791874 14791919 -70646561 + (CA)n Simple_repeat Simple_repeat 2 46 0 512 339 131 30 chr17 14792106 14792438 -70646042 + L2 LINE L2 2059 2356 -958 1811 132 0 33 chr17 14792438 14792710 -70645770 - AluSx SINE Alu -16 296 34 512 339 131 30 chr17 14792710 14793176 -70645304 + L2 LINE L2 2356 2938 -376 257 270 0 14 chr17 14793318 14793392 -70645088 + MER63 DNA MER1_type 984 1056 -5 592 296 62 33 chr17 14793476 14793750 -70644730 + L2 LINE L2 3029 3310 -3 1118 89 0 6 chr17 14793997 14794155 -70644325 + L1MA1 LINE L1 6146 6302 0 322 262 60 0 chr17 14795675 14795759 -70642721 + MIR SINE MIR 60 148 -60 305 231 231 0 chr17 14795866 14795987 -70642493 + Charlie8 DNA MER1_type 61 209 -2208 398 145 14 0 chr17 14796216 14796285 -70642195 - MIR SINE MIR -10 252 183 189 250 59 59 chr17 14796388 14796456 -70642024 + MIR SINE MIR 33 100 -162 295 23 45 0 chr17 14796497 14796541 -70641939 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1315 212 60 106 chr17 14796551 14797069 -70641411 - L1ME2 LINE L1 -10 6154 5661 323 303 28 28 chr17 14797070 14797215 -70641265 + MIR SINE MIR 118 262 0 358 283 39 11 chr17 14798459 14798639 -70639841 - L1ME4a LINE L1 -227 5894 5710 1756 201 44 16 chr17 14798972 14799427 -70639053 + L1MB7 LINE L1 5693 6159 -25 234 160 0 0 chr17 14800377 14800427 -70638053 + (CAT)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr17 14801037 14801057 -70637423 + (GGA)n Simple_repeat Simple_repeat 1 20 0 1080 158 16 0 chr17 14801241 14801425 -70637055 + MSTA LTR MaLR 242 428 0 5591 150 9 5 chr17 14801531 14803194 -70635286 + L1PB1 LINE L1 4126 5792 -359 246 173 0 53 chr17 14803194 14803269 -70635211 + (TA)n Simple_repeat Simple_repeat 1 71 0 2542 104 3 3 chr17 14803278 14803633 -70634847 + L1PB1 LINE L1 5791 6145 -6 24 67 0 0 chr17 14804719 14804764 -70633716 + AT_rich Low_complexity Low_complexity 1 45 0 326 70 0 53 chr17 14804840 14804897 -70633583 + L1PB1 LINE L1 6098 6151 0 22 56 0 0 chr17 14805069 14805105 -70633375 + AT_rich Low_complexity Low_complexity 1 36 0 503 306 0 0 chr17 14805152 14805276 -70633204 + MER5B DNA MER1_type 1 124 -54 2500 47 0 7 chr17 14805276 14805573 -70632907 - AluY SINE Alu -16 295 1 804 45 0 36 chr17 14805599 14805710 -70632770 + AluY SINE Alu 204 310 -1 222 196 0 43 chr17 14805712 14805758 -70632722 - MER5B DNA MER1_type -134 44 1 710 279 45 38 chr17 14805976 14806395 -70632085 - L1MDa LINE L1 -3558 2982 2561 390 235 43 71 chr17 14806401 14806656 -70631824 - L1MDa LINE L1 -4026 2514 2267 2457 79 0 0 chr17 14806675 14806978 -70631502 - AluY SINE Alu -8 303 1 183 254 0 0 chr17 14807133 14807196 -70631284 + T-rich Low_complexity Low_complexity 2 64 0 785 207 101 24 chr17 14807232 14807440 -70631040 + MIR SINE MIR 8 231 -31 327 296 105 17 chr17 14807907 14808079 -70630401 - HAL1 LINE L1 -847 1660 1474 204 179 0 0 chr17 14808415 14808454 -70630026 + (ATG)n Simple_repeat Simple_repeat 1 39 0 242 233 82 0 chr17 14808664 14808737 -70629743 + MIR3 SINE MIR 87 165 -43 822 227 55 81 chr17 14808884 14809281 -70629199 - L1ME1 LINE L1 -9 6157 5768 206 293 69 0 chr17 14809338 14809396 -70629084 + L2 LINE L2 3211 3272 0 306 356 34 7 chr17 14809722 14809871 -70628609 + MIR3 SINE MIR 45 197 -11 260 299 140 19 chr17 14811028 14811135 -70627345 + MIR3 SINE MIR 67 186 -22 447 19 0 0 chr17 14811258 14811310 -70627170 + (TG)n Simple_repeat Simple_repeat 2 53 0 317 276 105 86 chr17 14811603 14811928 -70626552 + HAL1b LINE L1 1 257 -1091 245 175 16 79 chr17 14811975 14812049 -70626431 + HAL1 LINE L1 1425 1489 -1018 2034 152 3 0 chr17 14812049 14812345 -70626135 + AluSq SINE Alu 1 297 -16 245 175 16 79 chr17 14812345 14812396 -70626084 + HAL1 LINE L1 1489 1542 -965 2194 152 106 2 chr17 14812451 14812933 -70625547 - L1MA9 LINE L1 0 6312 5781 456 51 0 0 chr17 14812944 14813003 -70625477 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1752 233 31 12 chr17 14813036 14813624 -70624856 - L1 LINE L1 -2802 3232 2634 1296 99 6 0 chr17 14813633 14813804 -70624676 + AluSp SINE Alu 130 301 -12 2420 264 56 31 chr17 14813804 14814822 -70623658 - L1 LINE L1 -3397 2637 1646 2206 88 10 14 chr17 14814822 14815119 -70623361 + AluSg SINE Alu 1 296 -14 2420 264 56 31 chr17 14815119 14817394 -70621086 - L1 LINE L1 -4388 1646 13 283 268 10 21 chr17 14817403 14817500 -70620980 + HAL1 LINE L1 1578 1673 -834 2292 106 0 3 chr17 14817531 14817833 -70620647 - AluSq SINE Alu -12 301 1 336 245 69 31 chr17 14818138 14818297 -70620183 + L1MDa LINE L1 2471 2635 -3905 337 325 56 25 chr17 14818358 14818555 -70619925 + L1MDa LINE L1 3996 4198 -2342 24 53 0 0 chr17 14818640 14818678 -70619802 + AT_rich Low_complexity Low_complexity 1 38 0 553 272 120 51 chr17 14818686 14819002 -70619478 + L1MDa LINE L1 4271 4608 -1932 566 294 104 40 chr17 14819126 14819613 -70618867 + L1MDa LINE L1 5160 5615 -949 839 133 0 44 chr17 14819613 14819748 -70618732 + FLAM_C SINE Alu 1 129 -4 566 294 104 40 chr17 14819748 14820366 -70618114 + L1MDa LINE L1 5615 6324 -240 240 250 0 0 chr17 14820603 14820655 -70617825 + GA-rich Low_complexity Low_complexity 3 54 0 487 220 10 0 chr17 14820805 14820905 -70617575 + MER5A DNA MER1_type 9 109 -80 251 152 87 0 chr17 14821679 14821725 -70616755 - L2 LINE L2 0 3313 3264 320 307 63 0 chr17 14821729 14821856 -70616624 + MIR SINE MIR 72 206 -56 2736 89 23 105 chr17 14822270 14822754 -70615726 - MLT2A1 LTR ERVL 0 444 1 2182 110 0 0 chr17 14822803 14823109 -70615371 - AluSx SINE Alu 0 306 1 208 195 0 46 chr17 14823140 14823227 -70615253 + GA-rich Low_complexity Low_complexity 2 84 0 342 0 0 0 chr17 14823465 14823503 -70614977 + (CA)n Simple_repeat Simple_repeat 2 39 0 232 154 31 46 chr17 14823549 14823614 -70614866 + CT-rich Low_complexity Low_complexity 4 67 0 426 301 59 7 chr17 14824710 14824863 -70613617 + MIR SINE MIR 24 184 -78 275 290 60 30 chr17 14825188 14825288 -70613192 + MIR SINE MIR 17 119 -89 343 295 16 52 chr17 14826331 14826534 -70611946 + MIR SINE MIR 38 231 -31 464 294 153 24 chr17 14828058 14828398 -70610082 + L2 LINE L2 1729 2112 -1202 239 275 162 18 chr17 14828424 14828590 -70609890 - MIR SINE MIR -40 222 25 459 270 20 83 chr17 14829056 14829217 -70609263 - MIR SINE MIR -21 241 94 2000 112 24 17 chr17 14829217 14829233 -70609247 - AluSx SINE Alu -14 298 284 199 0 0 0 chr17 14829233 14829255 -70609225 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2000 112 24 17 chr17 14829255 14829534 -70608946 - AluSx SINE Alu -28 284 1 459 270 20 83 chr17 14829534 14829576 -70608904 - MIR SINE MIR -168 94 51 2061 136 3 0 chr17 14830022 14830317 -70608163 - AluSx SINE Alu -16 296 1 311 385 63 25 chr17 14831531 14831770 -70606710 - L2 LINE L2 -21 3251 3004 298 339 43 9 chr17 14832713 14832828 -70605652 - MIR3 SINE MIR -14 194 76 2326 91 3 0 chr17 14833094 14833390 -70605090 - AluSc SINE Alu -12 297 1 215 211 28 42 chr17 14833517 14833588 -70604892 - L2 LINE L2 0 3272 3203 269 273 264 8 chr17 14833632 14833753 -70604727 - LTR67 LTR ERVL -396 161 10 1140 310 71 51 chr17 14834966 14836436 -70602044 + L1MEd LINE L1 5 1540 -4770 6052 102 22 1 chr17 14836451 14837940 -70600540 - L1PA8 LINE L1 -1 6171 4660 2609 102 31 26 chr17 14837940 14838362 -70600118 + L1PA8 LINE L1 4208 4631 -1515 329 298 16 0 chr17 14838363 14838484 -70599996 + L1MEd LINE L1 1532 1654 -4656 228 250 0 0 chr17 14838859 14838911 -70599569 + A-rich Low_complexity Low_complexity 4 55 0 237 367 76 26 chr17 14838921 14839185 -70599295 - LTR16C LTR ERVL -11 480 204 338 346 147 0 chr17 14839745 14839901 -70598579 - MIR3 SINE MIR -15 193 15 864 231 84 5 chr17 14839914 14840117 -70598363 - MER58A DNA MER1_type -5 219 1 183 80 0 0 chr17 14840966 14840991 -70597489 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 250 86 0 0 chr17 14841694 14841729 -70596751 + MLT1F1 LTR MaLR 68 102 -465 2569 188 13 44 chr17 14841729 14842346 -70596134 + L1MD3 LINE L1 7390 7987 -8 2285 86 3 3 chr17 14842350 14842642 -70595838 + AluSc SINE Alu 1 292 -17 1284 290 114 52 chr17 14843400 14843502 -70594978 + L2 LINE L2 2467 2561 -752 4356 97 12 54 chr17 14843502 14844190 -70594290 - L1PA13 LINE L1 -4 6159 5501 1284 290 114 52 chr17 14844190 14844885 -70593595 + L2 LINE L2 2561 3312 -1 330 355 19 0 chr17 14845664 14845771 -70592709 + MIR SINE MIR 6 114 -148 494 332 64 57 chr17 14847203 14847610 -70590870 - MLT1J LTR MaLR 0 511 102 180 255 39 20 chr17 14847665 14847716 -70590764 - L3 LINE CR1 -1078 499 448 12246 213 61 35 chr17 14848059 14849581 -70588899 - L1M2 LINE L1 -743 5227 3747 459 0 0 0 chr17 14849581 14849632 -70588848 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 12246 213 61 35 chr17 14849632 14853198 -70585282 - L1M2 LINE L1 -2223 3747 316 242 29 29 0 chr17 14853846 14853881 -70584599 + (TG)n Simple_repeat Simple_repeat 1 36 0 252 130 0 0 chr17 14853881 14853927 -70584553 + (GA)n Simple_repeat Simple_repeat 2 47 0 2295 87 3 13 chr17 14854154 14854454 -70584026 + AluY SINE Alu 1 297 -14 303 289 168 13 chr17 14854949 14855098 -70583382 + HAL1 LINE L1 2250 2421 -86 407 298 60 42 chr17 14855314 14855482 -70582998 + MIR SINE MIR 86 256 -6 391 130 29 0 chr17 14857269 14857338 -70581142 + L1PA10 LINE L1 6096 6166 -2 947 260 64 57 chr17 14857387 14857791 -70580689 - MLT1I LTR MaLR -2 407 1 1581 230 38 53 chr17 14861315 14861784 -70576696 - MLT1C LTR MaLR 0 467 6 2313 115 0 0 chr17 14861949 14862261 -70576219 - AluSx SINE Alu 0 312 1 640 199 0 38 chr17 14862834 14862965 -70575515 - FLAM_A SINE Alu -7 126 1 2920 97 0 42 chr17 14862993 14863157 -70575323 - MER57B LTR ERV1 0 434 265 2055 110 3 7 chr17 14863157 14863447 -70575033 + AluSx SINE Alu 3 291 -21 2920 97 0 42 chr17 14863447 14863734 -70574746 - MER57B LTR ERV1 -169 265 2 288 236 48 91 chr17 14865278 14865443 -70573037 - L1MC5 LINE L1 -562 7399 7242 227 274 63 53 chr17 14865628 14865818 -70572662 - L1MC5 LINE L1 -770 7191 7000 2003 122 0 0 chr17 14866132 14866403 -70572077 + AluSx SINE Alu 35 305 -7 946 222 87 64 chr17 14866500 14867032 -70571448 - L1MC5 LINE L1 -89 7872 7329 251 109 0 0 chr17 14867069 14867115 -70571365 + LTR66 LTR ERVL 394 439 -171 1286 214 19 89 chr17 14867127 14867612 -70570868 - L1MC5 LINE L1 -661 7300 6850 2248 144 75 8 chr17 14867628 14868030 -70570450 - LTR47A LTR ERVL -23 429 1 755 217 58 5 chr17 14868052 14868241 -70570239 - L1MC5 LINE L1 -1129 6832 6634 21 0 0 0 chr17 14868378 14868399 -70570081 + AT_rich Low_complexity Low_complexity 1 21 0 228 313 0 52 chr17 14868411 14868526 -70569954 - L1M4 LINE L1 -2014 4132 4024 30 0 0 0 chr17 14868574 14868604 -70569876 + AT_rich Low_complexity Low_complexity 1 30 0 36 0 0 0 chr17 14868630 14868666 -70569814 + AT_rich Low_complexity Low_complexity 1 36 0 1690 130 35 7 chr17 14868917 14869202 -70569278 - L1PA16 LINE L1 -9 6157 5865 2274 116 3 3 chr17 14869687 14869998 -70568482 - AluSq SINE Alu -2 311 1 21 36 0 0 chr17 14870315 14870343 -70568137 + AT_rich Low_complexity Low_complexity 1 28 0 197 256 0 13 chr17 14870476 14870554 -70567926 + T-rich Low_complexity Low_complexity 4 80 0 258 316 18 0 chr17 14870948 14871062 -70567418 - MER103 DNA DNA -49 117 2 684 0 0 0 chr17 14871718 14871794 -70566686 + (CAATA)n Simple_repeat Simple_repeat 4 79 0 195 344 244 0 chr17 14871827 14871917 -70566563 + MIR SINE MIR 36 147 -61 479 241 46 73 chr17 14872059 14872320 -70566160 - MER112 DNA MER1_type -5 255 2 533 284 87 41 chr17 14872329 14873051 -70565429 - L1ME LINE L1 -515 5649 4890 1465 264 109 28 chr17 14873408 14874132 -70564348 - MER20B DNA MER1_type -1 783 1 1266 179 167 32 chr17 14875778 14876103 -70562377 - MLT1A1 LTR MaLR -1 389 1 1675 153 80 58 chr17 14877902 14878267 -70560213 - MLT1A2 LTR MaLR -1 373 1 537 275 87 45 chr17 14878717 14879004 -70559476 + HAL1 LINE L1 2206 2504 -3 1495 218 97 47 chr17 14879651 14880096 -70558384 - MLT1C LTR MaLR 0 467 1 21 0 0 0 chr17 14880361 14880382 -70558098 + AT_rich Low_complexity Low_complexity 1 21 0 3110 55 3 13 chr17 14880408 14880792 -70557688 + L1PA5 LINE L1 5769 6148 -6 7557 167 29 17 chr17 14880798 14882297 -70556183 + L1PA14 LINE L1 3890 5422 -739 1976 158 0 10 chr17 14882297 14882600 -70555880 + AluSx SINE Alu 1 300 -12 7557 167 29 17 chr17 14882600 14883349 -70555131 + L1PA14 LINE L1 5422 6160 -1 225 0 0 0 chr17 14884074 14884099 -70554381 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 688 296 109 17 chr17 14885236 14885648 -70552832 + L1ME4a LINE L1 5603 6052 -69 328 337 112 0 chr17 14885926 14886095 -70552385 + MIR SINE MIR 67 254 -8 274 259 83 19 chr17 14887384 14887492 -70550988 - MIR3 SINE MIR -6 202 88 239 246 33 0 chr17 14887620 14887681 -70550799 - L2 LINE L2 -5 3308 3246 338 326 38 27 chr17 14887698 14887882 -70550598 + MIR SINE MIR 6 191 -71 181 362 0 0 chr17 14887963 14888010 -70550470 - L2 LINE L2 -86 3186 3140 2525 64 0 16 chr17 14888580 14888891 -70549589 - AluY SINE Alu -5 306 1 25 51 0 0 chr17 14889402 14889441 -70549039 + AT_rich Low_complexity Low_complexity 1 39 0 222 118 59 0 chr17 14889511 14889562 -70548918 + (TA)n Simple_repeat Simple_repeat 2 55 0 1515 208 88 67 chr17 14889625 14889817 -70548663 + L1MC4 LINE L1 6646 6833 -1209 2183 82 32 3 chr17 14889817 14890099 -70548381 - AluY SINE Alu -21 290 1 1515 208 88 67 chr17 14890099 14890440 -70548040 + L1MC4 LINE L1 6833 7190 -852 959 296 79 7 chr17 14890461 14890866 -70547614 - L1MC4a LINE L1 -178 7630 7197 301 365 68 10 chr17 14891589 14891781 -70546699 - MIR SINE MIR -9 253 51 312 363 20 27 chr17 14892162 14892308 -70546172 - MIR3 SINE MIR -28 180 36 23 54 0 0 chr17 14892461 14892498 -70545982 + AT_rich Low_complexity Low_complexity 1 37 0 403 235 135 0 chr17 14892543 14892678 -70545802 - L1MB7 LINE L1 -10 6174 6015 598 278 47 71 chr17 14892683 14892938 -70545542 - MIR SINE MIR -1 261 13 249 237 17 0 chr17 14894362 14894421 -70544059 - MIR SINE MIR -6 256 197 784 182 8 0 chr17 14894467 14894588 -70543892 + FLAM_C SINE Alu 1 122 -11 27 29 0 0 chr17 14894589 14894623 -70543857 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr17 14894821 14894844 -70543636 + AT_rich Low_complexity Low_complexity 1 23 0 705 278 65 42 chr17 14894913 14895317 -70543163 + L1ME LINE L1 5276 5685 -436 2659 45 0 0 chr17 14895563 14895871 -70542609 - AluY SINE Alu -3 308 1 1573 203 28 19 chr17 14898043 14898364 -70540116 + Tigger7 DNA MER2_type 2 325 -2162 329 193 145 0 chr17 14898354 14898437 -70540043 + Tigger7 DNA MER2_type 2393 2487 0 * 1890 186 19 38 chr17 14898519 14898889 -70539591 + MLT1A1 LTR MaLR 1 363 -2 1882 159 67 14 chr17 14900421 14900766 -70537714 - MLT1A1 LTR MaLR -2 363 1 28 91 0 0 chr17 14901331 14901408 -70537072 + AT_rich Low_complexity Low_complexity 1 77 0 234 289 173 56 chr17 14901514 14901695 -70536785 - L1MB7 LINE L1 -198 5923 5765 2043 113 0 3 chr17 14901695 14902013 -70536467 - AluSg SINE Alu 0 317 1 234 289 173 56 chr17 14902013 14902172 -70536308 - L1MB7 LINE L1 -356 5765 5542 578 230 103 0 chr17 14902712 14902838 -70535642 + Tigger3(Golem) DNA MER2_type 4 142 -2887 1572 151 8 12 chr17 14902850 14903109 -70535371 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 218 307 102 57 chr17 14903269 14903357 -70535123 + L2 LINE L2 3174 3265 -7 555 170 0 20 chr17 14903432 14903532 -70534948 - Tigger7 DNA MER2_type 0 2487 2390 1207 191 0 109 chr17 14903538 14903699 -70534781 - Tigger7 DNA MER2_type -472 261 145 2291 113 3 0 chr17 14903699 14904010 -70534470 + AluSx SINE Alu 1 312 0 1207 191 0 109 chr17 14904010 14904141 -70534339 - Tigger7 DNA MER2_type -588 145 1 1145 209 33 2 chr17 14904257 14904609 -70533871 + Charlie1 DNA MER1_type 1 2761 0 298 300 11 22 chr17 14904687 14904777 -70533703 - L2 LINE L2 0 3272 3184 189 326 97 28 chr17 14904851 14904995 -70533485 - L2 LINE L2 -333 2980 2827 1469 179 71 0 chr17 14905091 14905387 -70533093 - L1MB3 LINE L1 -2 6181 5865 29 28 0 0 chr17 14905684 14905720 -70532760 + AT_rich Low_complexity Low_complexity 1 36 0 851 234 27 5 chr17 14906074 14906258 -70532222 - MER5A DNA MER1_type 0 189 2 296 216 64 105 chr17 14907291 14907418 -70531062 - MER67D LTR ERV1 -2 541 421 2206 110 0 0 chr17 14907418 14907717 -70530763 - AluSc SINE Alu -10 299 1 296 216 64 105 chr17 14907717 14907760 -70530720 - MER67D LTR ERV1 -122 421 378 180 0 0 0 chr17 14907761 14907781 -70530699 + (A)n Simple_repeat Simple_repeat 1 20 0 303 331 16 16 chr17 14907884 14908008 -70530472 - MER67B LTR ERV1 -500 161 38 243 178 0 110 chr17 14908042 14908115 -70530365 - MIR SINE MIR -155 107 43 253 403 52 0 chr17 14909045 14909179 -70529301 - MIR SINE MIR -38 224 84 264 288 44 79 chr17 14909201 14909430 -70529050 + L2 LINE L2 2991 3211 -102 2082 133 0 3 chr17 14909448 14909741 -70528739 + AluSx SINE Alu 1 292 -20 521 214 61 46 chr17 14909750 14909881 -70528599 - MER5A DNA MER1_type -53 136 4 268 291 35 12 chr17 14909945 14910031 -70528449 + L2 LINE L2 3185 3272 0 4532 116 317 36 chr17 14910394 14911392 -70527088 + MER52C LTR ERV1 1 1278 0 192 331 127 28 chr17 14911614 14911756 -70526724 + L2 LINE L2 3117 3272 0 234 250 12 48 chr17 14911829 14911913 -70526567 + MIR SINE MIR 172 252 -10 204 341 91 23 chr17 14912201 14912289 -70526191 - MIR SINE MIR -116 146 53 1062 247 80 21 chr17 14913079 14913456 -70525024 + HAL1b LINE L1 211 609 -739 314 286 36 36 chr17 14913606 14913718 -70524762 + MIR SINE MIR 34 145 -63 233 182 0 0 chr17 14914938 14914982 -70523498 - MIR SINE MIR -13 249 206 349 182 111 30 chr17 14916713 14916812 -70521668 - MIR SINE MIR 0 262 156 203 136 45 0 chr17 14916938 14916982 -70521498 + GA-rich Low_complexity Low_complexity 3 48 0 4912 225 47 40 chr17 14918331 14918835 -70519645 - L1MB5 LINE L1 -7 6665 6166 1950 143 0 29 chr17 14918835 14919142 -70519338 - AluSx SINE Alu -14 298 1 4912 225 47 40 chr17 14919142 14920018 -70518462 - L1MB5 LINE L1 -506 6166 5298 2768 150 16 41 chr17 14920018 14920531 -70517949 - L1MA7 LINE L1 -1 6290 5791 4912 225 47 40 chr17 14920531 14920715 -70517765 - L1MB5 LINE L1 -1374 5298 5117 623 186 8 54 chr17 14920715 14920844 -70517636 + AluJo/FLAM SINE Alu 1 123 -179 2293 114 0 0 chr17 14920844 14921142 -70517338 + AluSx SINE Alu 1 298 -14 4912 225 47 40 chr17 14921142 14921970 -70516510 - L1MB5 LINE L1 -1554 5118 4248 3986 241 27 46 chr17 14921957 14923652 -70514828 - L1MB5 LINE L1 -4479 2167 498 * 344 289 44 92 chr17 14923835 14924108 -70514372 - L1MB5 LINE L1 -6275 267 8 738 286 18 0 chr17 14924507 14924734 -70513746 + L1ME3A LINE L1 5815 6045 -125 725 213 165 9 chr17 14925422 14925652 -70512828 + L1MB7 LINE L1 5919 6184 0 213 121 0 0 chr17 14925720 14925753 -70512727 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 238 308 0 13 chr17 14926206 14926284 -70512196 - L2 LINE L2 -3 3310 3234 987 200 148 37 chr17 14926432 14926757 -70511723 + MER93b LTR ERV1 12 372 -1 245 324 67 0 chr17 14926764 14926869 -70511611 - HAL1b LINE L1 -785 563 452 28 0 0 0 chr17 14928367 14928395 -70510085 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr17 14928689 14928729 -70509751 + AT_rich Low_complexity Low_complexity 1 40 0 1014 117 56 6 chr17 14928730 14928892 -70509588 + MSTA LTR MaLR 1 170 -258 501 78 0 65 chr17 14928924 14929001 -70509479 - L1PA8A LINE L1 -224 5907 5836 * 1317 100 21 0 chr17 14929000 14929190 -70509290 + L1P LINE L1 5148 5341 -805 1231 174 54 9 chr17 14929190 14929414 -70509066 + MSTA LTR MaLR 195 428 0 2180 99 0 30 chr17 14929805 14930109 -70508371 - AluSg SINE Alu -15 295 1 21 0 0 0 chr17 14933808 14933829 -70504651 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 14934846 14934867 -70503613 + AT_rich Low_complexity Low_complexity 1 21 0 796 293 96 9 chr17 14936033 14936357 -70502123 - MLT1K LTR MaLR -29 559 208 29 78 0 0 chr17 14936520 14936584 -70501896 + AT_rich Low_complexity Low_complexity 1 64 0 2223 123 0 0 chr17 14936629 14936929 -70501551 + AluY SINE Alu 1 300 -11 27 49 0 0 chr17 14937369 14937410 -70501070 + AT_rich Low_complexity Low_complexity 1 41 0 310 264 61 27 chr17 14937697 14937845 -70500635 + L1M4 LINE L1 3726 3878 -2268 350 57 19 0 chr17 14938267 14938320 -70500160 + (TC)n Simple_repeat Simple_repeat 1 54 0 579 310 114 53 chr17 14938566 14938927 -70499553 - MLT1K LTR MaLR -17 571 189 4379 159 47 34 chr17 14939300 14940867 -70497613 + L1PB4 LINE L1 4558 6154 -2 311 250 29 93 chr17 14941038 14941236 -70497244 - L1ME3A LINE L1 -25 6137 5955 2220 232 47 82 chr17 14941324 14942412 -70496068 - L1MC5 LINE L1 -432 7529 6476 45 62 0 0 chr17 14942596 14942676 -70495804 + AT_rich Low_complexity Low_complexity 1 80 0 2120 114 3 7 chr17 14942795 14943117 -70495363 + AluSx SINE Alu 1 312 0 437 249 69 40 chr17 14943137 14943310 -70495170 - HAL1b LINE L1 -744 604 427 1869 130 20 0 chr17 14943468 14943768 -70494712 - L1PA13 LINE L1 0 6163 5858 3066 247 56 24 chr17 14943959 14945108 -70493372 - L1MDa LINE L1 -2998 3542 2329 182 37 37 0 chr17 14945108 14945135 -70493345 + (TA)n Simple_repeat Simple_repeat 1 28 0 3066 247 56 24 chr17 14945135 14945413 -70493067 - L1MDa LINE L1 -4211 2329 2061 438 333 41 54 chr17 14945821 14946136 -70492344 + L1MEc LINE L1 114 424 -5972 233 224 26 40 chr17 14946473 14946549 -70491931 + L1MEc LINE L1 656 730 -5475 22 0 0 0 chr17 14946587 14946609 -70491871 + AT_rich Low_complexity Low_complexity 1 22 0 1188 251 64 103 chr17 14946659 14948390 -70490090 + L1MEc LINE L1 956 2538 -3677 249 108 0 0 chr17 14948390 14948427 -70490053 + (TG)n Simple_repeat Simple_repeat 2 38 0 1188 251 64 103 chr17 14948427 14948971 -70489509 + L1MEc LINE L1 2538 3102 -3113 11115 158 13 7 chr17 14948981 14951461 -70487019 + L1PA15-16 LINE L1 5 2723 -4126 2426 103 35 16 chr17 14951461 14951829 -70486651 + THE1C LTR MaLR 1 375 0 7255 115 198 44 chr17 14951829 14953198 -70485282 + THE1C-int LTR MaLR 1 1580 0 2456 128 8 8 chr17 14953198 14953573 -70484907 + THE1C LTR MaLR 1 375 0 12319 211 23 21 chr17 14953573 14956861 -70481619 + L1PA15-16 LINE L1 2719 6014 -835 2406 103 0 0 chr17 14956883 14957194 -70481286 + AluSq SINE Alu 1 311 -2 459 120 0 0 chr17 14957407 14957482 -70480998 - L1MB8 LINE L1 0 6178 6104 3724 224 50 13 chr17 14957511 14958691 -70479789 - L1MB4 LINE L1 -6 6174 5038 180 0 0 0 chr17 14958691 14958711 -70479769 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 3724 224 50 13 chr17 14958711 14959042 -70479438 - L1MB4 LINE L1 -1142 5038 4588 2098 116 0 0 chr17 14959042 14959351 -70479129 + AluSg SINE Alu 1 309 0 3724 224 50 13 chr17 14959351 14959543 -70478937 - L1MB4 LINE L1 -1592 4588 4404 962 251 138 3 chr17 14959565 14959943 -70478537 + L1ME LINE L1 4902 5330 -816 4177 213 56 43 chr17 14959950 14960099 -70478381 + L1M4 LINE L1 2 148 -6394 405 0 0 0 chr17 14960099 14960144 -70478336 + (CA)n Simple_repeat Simple_repeat 1 45 0 4177 213 56 43 chr17 14960144 14961068 -70477412 + L1M4 LINE L1 148 1089 -5453 2381 91 0 0 chr17 14961647 14961944 -70476536 + AluSp SINE Alu 1 297 -16 29 28 0 0 chr17 14963094 14963130 -70475350 + AT_rich Low_complexity Low_complexity 1 36 0 501 347 62 39 chr17 14963741 14964260 -70474220 - L2 LINE L2 -9 3304 2770 229 229 0 16 chr17 14964688 14964749 -70473731 + GA-rich Low_complexity Low_complexity 2 61 0 204 125 0 0 chr17 14964753 14964785 -70473695 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 354 278 68 15 chr17 14965476 14965609 -70472871 + MLT1I LTR MaLR 3 142 -267 4721 203 71 28 chr17 14965611 14966016 -70472464 - L1M4 LINE L1 -516 5662 5276 2339 159 20 32 chr17 14966016 14966455 -70472025 + Tigger2a DNA MER2_type 1 434 0 4721 203 71 28 chr17 14966455 14966567 -70471913 - L1M4 LINE L1 -902 5276 5170 2195 97 0 10 chr17 14966567 14966856 -70471624 - AluSx SINE Alu -26 286 1 4721 203 71 28 chr17 14966856 14967586 -70470894 - L1M4 LINE L1 -1008 5170 4324 1615 170 0 42 chr17 14967586 14967897 -70470583 - AluSx SINE Alu -14 298 1 4721 203 71 28 chr17 14967897 14968345 -70470135 - L1M4 LINE L1 -1854 4324 3897 242 164 55 36 chr17 14968730 14968785 -70469695 - MER20B DNA MER1_type -640 143 88 424 276 98 6 chr17 14969989 14970152 -70468328 + L1ME LINE L1 5531 5708 -413 247 318 79 32 chr17 14971168 14971294 -70467186 - MIR SINE MIR -50 212 81 1864 147 35 7 chr17 14971523 14971809 -70466671 - AluJb SINE Alu -16 296 3 242 143 78 91 chr17 14972706 14972783 -70465697 - L1ME LINE L1 -291 5830 5755 349 304 44 23 chr17 14972788 14972978 -70465502 - L1ME LINE L1 -467 5654 5455 1817 230 101 12 chr17 14974499 14974995 -70463485 - MLT1F LTR MaLR 0 542 3 255 237 13 53 chr17 14975065 14975141 -70463339 - MIR SINE MIR -177 85 13 9027 84 13 0 chr17 14977053 14978294 -70460186 - L1PA7 LINE L1 -1135 5011 3755 6928 52 9 1 chr17 14978295 14979429 -70459051 + L1PA7 LINE L1 5017 6158 0 390 282 127 48 chr17 14980891 14981342 -70457138 + L1ME LINE L1 5308 5804 -317 211 253 108 36 chr17 14981675 14981758 -70456722 - L2 LINE L2 -21 3251 3163 323 279 266 34 chr17 14982495 14983134 -70455346 + L2 LINE L2 1436 2222 -1092 258 266 115 78 chr17 14983178 14983370 -70455110 - MIR SINE MIR -56 206 8 365 276 112 88 chr17 14983381 14983577 -70454903 + L2 LINE L2 2222 2427 -887 2064 168 80 15 chr17 14983577 14983977 -70454503 + MSTB LTR MaLR 1 426 0 365 276 112 88 chr17 14983977 14984030 -70454450 + L2 LINE L2 2427 2477 -837 234 128 0 0 chr17 14984061 14984100 -70454380 + (CA)n Simple_repeat Simple_repeat 2 40 0 261 378 49 5 chr17 14984136 14984321 -70454159 + L2 LINE L2 2720 2912 -402 320 381 32 0 chr17 14984549 14984675 -70453805 + L2 LINE L2 3143 3272 0 198 133 0 0 chr17 14984740 14984770 -70453710 + MER5A DNA MER1_type 4 33 -156 191 327 142 18 chr17 14984812 14984925 -70453555 + MIR SINE MIR 129 255 -7 207 0 0 0 chr17 14985122 14985145 -70453335 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 655 322 74 36 chr17 14986221 14986334 -70452146 - L2 LINE L2 -6 3307 3200 264 59 0 0 chr17 14986334 14986368 -70452112 + (TG)n Simple_repeat Simple_repeat 2 35 0 655 322 74 36 chr17 14986368 14986617 -70451863 - L2 LINE L2 -113 3200 2931 24 32 0 0 chr17 14987781 14987812 -70450668 + AT_rich Low_complexity Low_complexity 1 31 0 306 284 142 39 chr17 14987841 14988123 -70450357 - L1MC4a LINE L1 -1916 5892 5582 1122 189 38 14 chr17 14988124 14988336 -70450144 + AluJo SINE Alu 86 302 -10 252 59 0 0 chr17 14988353 14988387 -70450093 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 808 273 48 17 chr17 14988491 14988722 -70449758 - MIR SINE MIR -11 251 14 1007 150 21 27 chr17 14989058 14989245 -70449235 + L1PA16 LINE L1 5980 6165 -1 413 134 0 0 chr17 14989509 14989576 -70448904 - L1MB7 LINE L1 -64 6120 6054 195 266 65 129 chr17 14991035 14991159 -70447321 + MER5B DNA MER1_type 1 116 -62 * 409 233 87 10 chr17 14991139 14991242 -70447238 + MIR SINE MIR 35 145 -63 184 212 30 15 chr17 14991397 14991463 -70447017 + CT-rich Low_complexity Low_complexity 2 68 0 549 244 81 9 chr17 14991554 14991904 -70446576 + MLT1G1 LTR MaLR 135 590 -5 2798 16 0 0 chr17 14992076 14992384 -70446096 + AluYa5 SINE Alu 1 308 -3 2218 107 0 7 chr17 14992581 14992872 -70445608 - AluSc SINE Alu -20 289 1 2735 128 46 51 chr17 14994263 14994714 -70443766 + L1MA5A LINE L1 5732 6181 -116 2464 83 0 3 chr17 14994714 14995026 -70443454 + AluY SINE Alu 1 311 0 2735 128 46 51 chr17 14995026 14995143 -70443337 + L1MA5A LINE L1 6181 6297 0 794 198 71 19 chr17 14996026 14996238 -70442242 - MLT1A1 LTR MaLR -3 362 140 1071 152 74 0 chr17 14996273 14996490 -70441990 - L1MA8 LINE L1 -54 6237 6005 315 141 127 0 chr17 14996497 14996568 -70441912 - MLT1A1 LTR MaLR -211 154 75 27 73 0 0 chr17 14996676 14996731 -70441749 + AT_rich Low_complexity Low_complexity 1 55 0 2528 124 8 0 chr17 14996809 14997179 -70441301 - THE1C LTR MaLR -2 373 1 490 286 78 19 chr17 14998948 14999102 -70439378 - MER5B DNA MER1_type -15 163 1 1901 203 123 0 chr17 14999715 15000163 -70438317 - MLT1D LTR MaLR 0 505 3 1856 189 31 83 chr17 15000517 15000561 -70437919 + LTR32 LTR ERVL 15 60 -411 2466 81 0 0 chr17 15000561 15000869 -70437611 + AluY SINE Alu 1 308 -3 1856 189 31 83 chr17 15000869 15000977 -70437503 + LTR32 LTR ERVL 60 172 -299 1757 83 147 4 chr17 15000977 15001229 -70437251 - AluSg SINE Alu -22 288 1 1856 189 31 83 chr17 15001229 15001557 -70436923 + LTR32 LTR ERVL 172 471 0 2724 141 44 96 chr17 15001674 15002291 -70436189 - LTR12 LTR ERV1 -129 585 1 452 245 10 0 chr17 15002538 15002636 -70435844 - MER5A DNA MER1_type -84 105 7 904 201 17 0 chr17 15002650 15002824 -70435656 + MER45A DNA AcHobo 1 177 -1 189 293 61 40 chr17 15002841 15002940 -70435540 + MIR SINE MIR 50 150 -112 2270 88 3 31 chr17 15003762 15004080 -70434400 + AluSg SINE Alu 1 309 -1 695 279 6 12 chr17 15004138 15004310 -70434170 - MER5B DNA MER1_type 0 178 8 901 250 17 30 chr17 15004352 15004588 -70433892 + MIR SINE MIR 8 240 -22 797 167 119 0 chr17 15005108 15005276 -70433204 + MER5A DNA MER1_type 1 188 -1 2119 93 4 4 chr17 15005460 15005739 -70432741 + AluSg SINE Alu 1 279 -31 451 301 41 0 chr17 15007514 15007660 -70430820 + MIR SINE MIR 1 152 -110 837 193 0 101 chr17 15007668 15007886 -70430594 - MER63A DNA MER1_type -7 203 8 418 300 8 0 chr17 15008576 15008696 -70429784 - MIR3 SINE MIR -18 190 70 977 168 5 41 chr17 15009596 15009792 -70428688 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr17 15010935 15010963 -70427517 + AT_rich Low_complexity Low_complexity 1 28 0 2660 146 17 0 chr17 15011240 15011659 -70426821 - MSTB LTR MaLR 0 426 1 1168 238 140 53 chr17 15011857 15012349 -70426131 - MLT1F LTR MaLR 0 542 8 412 267 88 47 chr17 15012526 15013100 -70425380 + L1MEc LINE L1 1239 1728 -4487 386 252 70 68 chr17 15013132 15013561 -70424919 + L1MEc LINE L1 2840 3269 -2946 1709 207 42 42 chr17 15013609 15014179 -70424301 - L1 LINE L1 -1387 4759 4190 880 145 54 6 chr17 15014174 15014340 -70424140 - L1 LINE L1 -2173 3973 3800 * 1385 238 3 20 chr17 15014338 15014695 -70423785 + L1 LINE L1 4766 5116 -1030 416 259 158 20 chr17 15014715 15015042 -70423438 + L1MC4a LINE L1 5547 5648 -473 2003 88 4 0 chr17 15015610 15015871 -70422609 - AluSg SINE Alu -12 298 37 6667 153 97 10 chr17 15015932 15016831 -70421649 + L1PA15 LINE L1 3507 4327 -1838 1964 156 3 10 chr17 15016831 15017145 -70421335 + AluSx SINE Alu 1 312 0 6667 153 97 10 chr17 15017145 15018390 -70420090 + L1PA15 LINE L1 4327 5937 -228 2030 88 0 19 chr17 15018390 15018650 -70419830 - AluSg SINE Alu -17 293 39 6667 153 97 10 chr17 15018650 15018857 -70419623 + L1PA15 LINE L1 5937 6125 -40 430 294 91 34 chr17 15019680 15020174 -70418306 - L1ME3 LINE L1 -335 5827 5306 30 27 0 0 chr17 15020243 15020280 -70418200 + AT_rich Low_complexity Low_complexity 1 37 0 195 143 71 48 chr17 15020446 15020488 -70417992 - MIR SINE MIR -68 194 152 566 316 72 29 chr17 15020562 15021145 -70417335 - L1ME3 LINE L1 -979 5167 4560 371 282 45 86 chr17 15021187 15021432 -70417048 - L2 LINE L2 0 3313 3079 275 282 47 0 chr17 15021530 15021615 -70416865 - LTR33A LTR ERVL -89 434 346 319 261 45 6 chr17 15021769 15021897 -70416583 - HERVL LTR ERVL -663 4822 4685 1809 154 67 14 chr17 15021907 15022278 -70416202 + L1MC1 LINE L1 5943 6333 0 779 268 21 70 chr17 15022385 15022758 -70415722 - LTR41 LTR ERVL -10 763 409 379 196 142 20 chr17 15022889 15022965 -70415515 - LTR41 LTR ERVL -607 166 101 993 155 0 0 chr17 15022965 15023146 -70415334 + L1MA4 LINE L1 6117 6297 -3 379 196 142 20 chr17 15023146 15023217 -70415263 - LTR41 LTR ERVL -672 101 1 497 294 50 0 chr17 15023579 15023759 -70414721 - LTR33A LTR ERVL -14 509 321 288 282 51 68 chr17 15024149 15024266 -70414214 + L2 LINE L2 3199 3313 0 255 335 55 30 chr17 15024438 15024602 -70413878 - L2 LINE L2 -617 2697 2530 214 270 95 16 chr17 15024627 15024690 -70413790 - L2 LINE L2 -58 3214 3147 747 100 9 0 chr17 15025142 15025252 -70413228 - AluSg/x SINE Alu -15 297 187 4132 261 80 50 chr17 15026209 15028489 -70409991 - L1M4 LINE L1 -972 5174 2820 1738 178 3 7 chr17 15028489 15028792 -70409688 - AluJb SINE Alu -10 302 1 4132 261 80 50 chr17 15028792 15028833 -70409647 - L1M4 LINE L1 -3326 2820 2782 3402 144 32 18 chr17 15029253 15029871 -70408609 - L1MB3 LINE L1 0 6183 5557 332 301 102 34 chr17 15030882 15030965 -70407515 + HAL1b LINE L1 278 354 -994 1108 133 133 15 chr17 15030965 15031160 -70407320 - MER20 DNA MER1_type -1 218 1 332 301 102 34 chr17 15031160 15031312 -70407168 + HAL1b LINE L1 354 529 -819 336 239 114 42 chr17 15031725 15031892 -70406588 + L1ME4a LINE L1 5908 6086 -35 21 0 0 0 chr17 15031919 15031940 -70406540 + AT_rich Low_complexity Low_complexity 1 21 0 572 252 75 0 chr17 15032843 15033002 -70405478 + MLT1I LTR MaLR 239 409 0 199 250 0 78 chr17 15033050 15033114 -70405366 + L2 LINE L2 3252 3310 -3 1776 108 46 81 chr17 15033116 15033439 -70405041 + AluJo SINE Alu 1 312 0 463 351 0 0 chr17 15033726 15033891 -70404589 + MIR3 SINE MIR 34 198 -10 2037 142 134 11 chr17 15034074 15034455 -70404025 + MSTA LTR MaLR 1 428 0 1821 289 42 20 chr17 15035239 15035769 -70402711 - MLT1H LTR MaLR -2 565 1 586 290 38 6 chr17 15035769 15035952 -70402528 + LTR33 LTR ERVL 23 211 -310 358 282 32 51 chr17 15036043 15036199 -70402281 - L2 LINE L2 -216 3097 2945 3227 29 3 5 chr17 15036600 15036979 -70401501 + L1PA3 LINE L1 5775 6152 -3 3123 167 59 26 chr17 15037091 15037511 -70400969 + MER39B LTR ERV1 6 410 -243 231 36 0 0 chr17 15037511 15037539 -70400941 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 2216 109 3 0 chr17 15037542 15037826 -70400654 - AluSx SINE Alu -27 285 1 3123 167 59 26 chr17 15037826 15037932 -70400548 + MER39B LTR ERV1 411 512 -141 2363 75 0 0 chr17 15037932 15038266 -70400214 + AluSc SINE Alu 1 334 0 3123 167 59 26 chr17 15038266 15038356 -70400124 + MER39B LTR ERV1 512 649 -4 710 316 82 28 chr17 15038383 15038849 -70399631 + LTR16C LTR ERVL 1 491 0 250 282 70 35 chr17 15039179 15039321 -70399159 - HAL1b LINE L1 -437 911 765 288 311 68 17 chr17 15039797 15039974 -70398506 + L1MC5 LINE L1 7302 7487 -474 198 0 0 0 chr17 15040623 15040645 -70397835 + (TG)n Simple_repeat Simple_repeat 2 23 0 1041 157 0 6 chr17 15040647 15040806 -70397674 - AluJb SINE Alu -30 282 125 220 340 21 21 chr17 15040956 15041050 -70397430 + MIR SINE MIR 54 147 -115 446 240 125 68 chr17 15041659 15041851 -70396629 - MER63A DNA MER1_type -4 206 4 484 319 77 39 chr17 15041960 15042349 -70396131 - L2 LINE L2 -2 3311 2908 2073 135 16 97 chr17 15042349 15042653 -70395827 - MER57A LTR ERV1 0 403 143 1570 180 7 11 chr17 15042653 15042936 -70395544 + AluJb SINE Alu 7 288 -24 2073 135 16 97 chr17 15042936 15043062 -70395418 - MER57A LTR ERV1 -260 143 8 190 375 14 0 chr17 15043076 15043148 -70395332 - L2 LINE L2 -500 2814 2742 249 318 0 0 chr17 15043229 15043317 -70395163 + MIR SINE MIR 175 262 0 180 0 0 0 chr17 15045191 15045211 -70393269 + (TC)n Simple_repeat Simple_repeat 2 21 0 680 214 10 57 chr17 15046390 15046582 -70391898 + MER5A DNA MER1_type 7 189 0 339 306 102 51 chr17 15047272 15047507 -70390973 - L2 LINE L2 -25 3247 3001 274 342 21 12 chr17 15047791 15048031 -70390449 + L1 LINE L1 4392 4633 -1513 1793 116 4 8 chr17 15048092 15048372 -70390108 + AluSx SINE Alu 33 311 0 354 231 36 159 chr17 15048487 15048738 -70389742 + L1MC4 LINE L1 5727 5946 -1862 1097 252 84 83 chr17 15048800 15050000 -70388480 + L1MC4 LINE L1 6428 7625 -417 2223 121 0 0 chr17 15050000 15050297 -70388183 + AluSx SINE Alu 1 297 -15 1097 252 84 83 chr17 15050297 15050624 -70387856 + L1MC4 LINE L1 7625 7950 -92 7024 188 176 19 chr17 15051304 15052821 -70385659 - MER52A LTR ERV1 0 1755 1 294 149 0 0 chr17 15052822 15052869 -70385611 + L1ME1 LINE L1 5397 5443 -735 764 193 40 0 chr17 15052870 15053020 -70385460 + FRAM SINE Alu 4 159 -17 3213 141 40 51 chr17 15053061 15053712 -70384768 + LTR48B LTR ERV1 1 644 0 321 160 50 26 chr17 15053753 15054058 -70384422 + (TA)n Simple_repeat Simple_repeat 1 312 0 373 137 10 75 chr17 15054060 15054370 -70384110 + (TATATG)n Simple_repeat Simple_repeat 1 289 0 1900 210 117 49 chr17 15054412 15055044 -70383436 + L1ME1 LINE L1 5471 6145 -21 261 298 39 19 chr17 15057308 15057412 -70381068 + MIR3 SINE MIR 102 207 -1 826 204 11 11 chr17 15058638 15058814 -70379666 - FRAM SINE Alu -1 175 1 363 294 78 80 chr17 15058880 15059278 -70379202 - L2 LINE L2 -61 3252 2856 1901 209 93 28 chr17 15059411 15059917 -70378563 - MLT1F LTR MaLR -3 539 1 314 265 114 8 chr17 15060858 15060990 -70377490 + MIR SINE MIR 47 192 -70 376 234 172 0 chr17 15061131 15061259 -70377221 - MER5A DNA MER1_type -3 186 37 500 240 24 16 chr17 15061296 15061421 -70377059 + MER5B DNA MER1_type 1 126 -52 2255 136 128 8 chr17 15061826 15062208 -70376272 - MSTA LTR MaLR 0 428 1 774 252 36 65 chr17 15064310 15064588 -70373892 - L2 LINE L2 -512 2802 2533 857 300 108 50 chr17 15064716 15064993 -70373487 + ERVL LTR ERVL 4430 4690 -1074 702 236 44 6 chr17 15064993 15065175 -70373305 + MER5A DNA MER1_type 1 189 0 857 300 108 50 chr17 15065175 15065245 -70373235 + ERVL LTR ERVL 4690 4755 -1009 2253 92 7 23 chr17 15065245 15065381 -70373099 + AluSq SINE Alu 1 138 -175 2250 78 4 0 chr17 15065381 15065686 -70372794 + AluY SINE Alu 1 306 0 2253 92 7 23 chr17 15065686 15065854 -70372626 + AluSq SINE Alu 138 301 -12 857 300 108 50 chr17 15065854 15066081 -70372399 + ERVL LTR ERVL 4755 5038 -726 250 388 0 0 chr17 15066731 15066811 -70371669 + LTR16C LTR ERVL 274 353 -138 272 242 15 0 chr17 15066813 15066879 -70371601 - LTR41 LTR ERVL -1 772 706 1161 239 135 88 chr17 15066968 15067603 -70370877 - LTR41 LTR ERVL -78 695 31 1088 205 146 10 chr17 15067695 15067997 -70370483 + MER2 DNA MER2_type 1 343 -1 531 237 0 0 chr17 15068046 15068160 -70370320 - L2 LINE L2 -777 2537 2424 815 233 60 104 chr17 15068243 15068300 -70370180 - L1M4 LINE L1 -1712 4434 4376 2110 144 0 7 chr17 15068300 15068606 -70369874 - AluJo SINE Alu -8 304 1 815 233 60 104 chr17 15068606 15069136 -70369344 - L1M4 LINE L1 -1770 4376 3873 2409 55 3 52 chr17 15069346 15069672 -70368808 - AluY SINE Alu -1 310 1 1884 174 0 3 chr17 15069962 15070272 -70368208 - AluJb SINE Alu -3 309 1 385 346 108 38 chr17 15070393 15070873 -70367607 - L2 LINE L2 -680 2634 2121 21 57 0 0 chr17 15070876 15070911 -70367569 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 15070939 15070960 -70367520 + AT_rich Low_complexity Low_complexity 1 21 0 2337 104 0 0 chr17 15070970 15071279 -70367201 + AluSc SINE Alu 1 309 0 269 250 159 0 chr17 15071416 15071504 -70366976 + L1ME4a LINE L1 5964 6065 -56 212 278 70 61 chr17 15071611 15071726 -70366754 + MER5B DNA MER1_type 7 122 -56 1222 183 32 57 chr17 15071866 15072145 -70366335 - AluJo SINE Alu -22 290 19 402 290 90 7 chr17 15072764 15072909 -70365571 + MER5B DNA MER1_type 17 173 -5 3465 203 97 14 chr17 15073051 15073776 -70364704 + MER45B DNA AcHobo 1 785 -255 6831 114 13 4 chr17 15073780 15074912 -70363568 - L1MA5A LINE L1 0 6297 5156 1031 188 121 21 chr17 15074913 15075153 -70363327 + MER45B DNA AcHobo 777 1040 0 234 269 45 60 chr17 15075663 15075797 -70362683 + MIR3 SINE MIR 3 134 -74 601 215 35 113 chr17 15076499 15076741 -70361739 - MER106B DNA MER1_type 0 236 2 398 268 39 0 chr17 15076868 15076995 -70361485 + MIR SINE MIR 118 249 -13 512 184 76 89 chr17 15077031 15077189 -70361291 - MLT1F1 LTR MaLR 0 567 412 593 40 40 0 chr17 15077314 15077390 -70361090 - MADE1 DNA Mariner -1 79 1 2298 85 34 3 chr17 15077393 15077686 -70360794 - AluY SINE Alu -9 302 1 206 278 19 0 chr17 15077861 15077915 -70360565 + L2 LINE L2 3189 3243 -29 547 40 0 26 chr17 15077915 15077991 -70360489 - AluY SINE Alu -234 75 2 2203 246 75 27 chr17 15078429 15079245 -70359235 + L1ME LINE L1 4361 5215 -931 1232 169 44 32 chr17 15079306 15079555 -70358925 + L1ME LINE L1 5526 5777 -389 503 263 75 38 chr17 15079587 15079800 -70358680 + LTR16C LTR ERVL 271 491 0 206 303 15 0 chr17 15080167 15080233 -70358247 - L2 LINE L2 -16 3297 3231 2618 49 0 3 chr17 15080410 15080716 -70357764 + AluY SINE Alu 1 305 -6 202 214 0 24 chr17 15081895 15081937 -70356543 + CT-rich Low_complexity Low_complexity 1 41 0 237 246 203 0 chr17 15082084 15082202 -70356278 + MER5A DNA MER1_type 42 183 -6 205 284 0 102 chr17 15082417 15082505 -70355975 + MIR SINE MIR 22 100 -108 601 198 9 0 chr17 15082566 15082677 -70355803 - MER5A DNA MER1_type -74 115 4 2144 76 10 24 chr17 15082712 15083000 -70355480 + AluSp SINE Alu 1 284 -29 709 122 10 0 chr17 15082902 15083000 -70355480 + AluSp/q SINE Alu 186 340 0 456 0 0 18 chr17 15083000 15083056 -70355424 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1888 152 0 26 chr17 15083096 15083267 -70355213 - AluSx SINE Alu -11 301 127 275 80 40 0 chr17 15083267 15083317 -70355163 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 2258 89 0 4 chr17 15083317 15083597 -70354883 - AluSg SINE Alu -31 279 1 1888 152 0 26 chr17 15083597 15083733 -70354747 - AluSx SINE Alu -183 129 1 1628 84 0 9 chr17 15083882 15084096 -70354384 + AluY SINE Alu 76 287 -24 778 250 6 0 chr17 15084097 15084265 -70354215 + LTR39 LTR ERV1 615 783 0 345 333 169 11 chr17 15084500 15084689 -70353791 + MIR SINE MIR 22 240 -22 644 336 42 8 chr17 15084731 15084969 -70353511 + L2 LINE L2 2682 2927 -387 599 280 136 18 chr17 15085788 15086153 -70352327 - LTR16C LTR ERVL -37 454 9 306 148 0 0 chr17 15086721 15086775 -70351705 + (GA)n Simple_repeat Simple_repeat 1 54 0 2537 68 0 0 chr17 15086791 15087099 -70351381 + AluY SINE Alu 1 308 -3 207 88 0 0 chr17 15087658 15087692 -70350788 + (T)n Simple_repeat Simple_repeat 1 34 0 2402 87 0 0 chr17 15087745 15088056 -70350424 + AluY SINE Alu 1 311 0 487 308 11 39 chr17 15088348 15088530 -70349950 + MIR SINE MIR 15 191 -71 2294 95 7 0 chr17 15089203 15089498 -70348982 - AluSx SINE Alu -15 297 1 560 186 0 62 chr17 15089612 15089741 -70348739 - MER103 DNA DNA -44 122 2 2093 161 45 34 chr17 15090021 15090563 -70347917 - MLT2A2 LTR ERVL 0 554 1 950 189 21 31 chr17 15091381 15091572 -70346908 + MER5A DNA MER1_type 1 189 0 2170 114 0 0 chr17 15091717 15092006 -70346474 - AluY SINE Alu -14 297 9 597 261 6 51 chr17 15092105 15092281 -70346199 + MER5B DNA MER1_type 1 168 -10 32 0 0 0 chr17 15092543 15092575 -70345905 + AT_rich Low_complexity Low_complexity 1 32 0 2052 135 7 7 chr17 15092575 15092878 -70345602 - AluSx SINE Alu -9 303 1 1886 223 135 24 chr17 15093143 15093609 -70344871 - MLT2B1 LTR ERVL 0 520 3 300 266 236 15 chr17 15094050 15094249 -70344231 - LTR33 LTR ERVL -99 422 180 190 340 68 49 chr17 15095380 15095542 -70342938 - MIR3 SINE MIR -2 206 42 319 323 38 8 chr17 15095640 15095773 -70342707 - MLT1K LTR MaLR -114 474 338 245 350 12 12 chr17 15095862 15095942 -70342538 - MLT1K LTR MaLR -429 159 80 206 311 16 0 chr17 15096973 15097034 -70341446 + MER5A DNA MER1_type 60 121 -68 923 250 62 102 chr17 15097573 15097993 -70340487 + L2 LINE L2 2911 3313 0 375 286 36 77 chr17 15098958 15098997 -70339483 - MIR SINE MIR -66 196 157 2390 95 0 0 chr17 15098997 15099302 -70339178 - AluSp SINE Alu -7 306 2 375 286 36 77 chr17 15099302 15099458 -70339022 - MIR SINE MIR -105 157 9 354 250 42 42 chr17 15100027 15100171 -70338309 + MER103 DNA DNA 10 153 -13 183 250 23 0 chr17 15101640 15101684 -70336796 - L2 LINE L2 -18 3295 3251 2333 170 36 0 chr17 15101877 15102288 -70336192 - MSTB1 LTR MaLR -6 426 1 4167 200 35 17 chr17 15103017 15104201 -70334279 - L1MB8 LINE L1 -23 6155 4961 186 71 0 0 chr17 15104395 15104423 -70334057 + (A)n Simple_repeat Simple_repeat 1 28 0 185 152 30 0 chr17 15104501 15104534 -70333946 - MIR SINE MIR -130 78 45 186 344 117 16 chr17 15104662 15104790 -70333690 + L2 LINE L2 3165 3305 -8 704 259 150 74 chr17 15105108 15105595 -70332885 - MLT1H1 LTR MaLR 0 555 32 2419 80 7 0 chr17 15106551 15106850 -70331630 + AluY SINE Alu 1 301 -10 261 0 0 0 chr17 15106850 15106879 -70331601 + (CTA)n Simple_repeat Simple_repeat 1 29 0 304 173 0 0 chr17 15107104 15107156 -70331324 - L1MC4 LINE L1 -1339 6703 6652 2144 99 3 41 chr17 15107706 15108020 -70330460 + AluSg SINE Alu 1 302 -8 267 31 0 0 chr17 15108703 15108735 -70329745 + (GGA)n Simple_repeat Simple_repeat 2 33 0 182 333 114 0 chr17 15108761 15108893 -70329587 + L2 LINE L2 2873 3019 -253 2216 105 0 10 chr17 15109270 15109566 -70328914 - AluSc SINE Alu -16 293 1 236 300 73 84 chr17 15110318 15110985 -70327495 + HAL1 LINE L1 1057 1716 -791 186 43 0 0 chr17 15110985 15111008 -70327472 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 242 175 0 0 chr17 15111299 15111339 -70327141 + L1MC4 LINE L1 7930 7969 -73 229 268 47 24 chr17 15111410 15111537 -70326943 - L2 LINE L2 -1477 1837 1708 1018 213 121 114 chr17 15111664 15112109 -70326371 + MER39 LTR ERV1 67 682 -25 263 317 10 29 chr17 15112237 15112341 -70326139 - L2 LINE L2 -1862 1452 1351 327 244 144 25 chr17 15112366 15112422 -70326058 - L1ME1 LINE L1 -15 6151 6103 318 26 0 0 chr17 15112422 15112461 -70326019 + (CA)n Simple_repeat Simple_repeat 2 40 0 327 244 144 25 chr17 15112461 15112564 -70325916 - L1ME1 LINE L1 -63 6103 5973 866 271 106 61 chr17 15112668 15113093 -70325387 - L1ME1 LINE L1 -172 5994 5551 875 300 114 24 chr17 15113157 15113620 -70324860 + LTR33 LTR ERVL 10 514 -7 260 356 0 0 chr17 15113696 15113797 -70324683 - L2 LINE L2 -2068 1246 1146 226 309 164 7 chr17 15113957 15114109 -70324371 + L2 LINE L2 3118 3293 -20 23 33 0 0 chr17 15114803 15114833 -70323647 + AT_rich Low_complexity Low_complexity 1 30 0 2383 38 41 7 chr17 15114875 15115166 -70323314 - AluY SINE Alu -10 301 1 242 292 64 43 chr17 15115199 15115365 -70323115 + MIR SINE MIR 12 177 -31 757 222 108 0 chr17 15116818 15117003 -70321477 + L2 LINE L2 3109 3313 0 386 221 107 41 chr17 15117419 15117541 -70320939 + LTR16C LTR ERVL 362 491 0 471 78 0 0 chr17 15117658 15117722 -70320758 + (TTC)n Simple_repeat Simple_repeat 1 64 0 180 0 0 0 chr17 15117751 15117771 -70320709 + (T)n Simple_repeat Simple_repeat 1 20 0 2157 113 3 13 chr17 15118061 15118371 -70320109 - AluSx SINE Alu -5 307 1 1674 126 69 11 chr17 15118409 15118686 -70319794 - Tigger2a DNA MER2_type 0 444 152 789 87 0 56 chr17 15118810 15118936 -70319544 - Tigger2a DNA MER2_type -311 123 5 2191 62 0 122 chr17 15119151 15119487 -70318993 + AluY SINE Alu 1 295 -6 209 253 25 38 chr17 15121347 15121426 -70317054 + MIR SINE MIR 74 151 -111 2079 301 168 8 chr17 15121455 15122527 -70315953 + L2 LINE L2 1145 2388 -926 491 335 42 0 chr17 15122554 15122799 -70315681 + L2 LINE L2 2751 3003 -310 292 340 32 27 chr17 15122864 15123049 -70315431 - L2 LINE L2 -132 3181 2996 23 33 0 0 chr17 15123312 15123342 -70315138 + AT_rich Low_complexity Low_complexity 1 30 0 555 344 44 59 chr17 15123470 15123611 -70314869 - L1M4 LINE L1 -2179 3967 3825 1804 148 62 45 chr17 15123611 15123969 -70314511 - MLT1A1 LTR MaLR -1 364 1 555 344 44 59 chr17 15123969 15124556 -70313924 - L1M4 LINE L1 -2321 3825 3250 390 139 14 14 chr17 15124960 15125032 -70313448 + L1MD3 LINE L1 7729 7800 -195 * 4141 236 72 19 chr17 15125027 15126228 -70312252 + L1MC3 LINE L1 5548 6811 -974 344 207 0 69 chr17 15126275 15126362 -70312118 + MLT1F1 LTR MaLR 45 125 -442 2674 210 24 15 chr17 15126362 15126947 -70311533 + L1MD3 LINE L1 7405 7994 -1 284 257 57 0 chr17 15128514 15128584 -70309896 + L2 LINE L2 3239 3312 -1 2057 112 3 11 chr17 15130200 15130516 -70307964 + AluSq SINE Alu 1 314 0 257 306 14 0 chr17 15130843 15130915 -70307565 - MIR SINE MIR -2 260 188 522 258 139 43 chr17 15131787 15131993 -70306487 + MER34 LTR ERV1 1 226 -316 2988 164 27 36 chr17 15131993 15132548 -70305932 + MER50 LTR ERV1 1 550 -184 3183 172 3 5 chr17 15132553 15133135 -70305345 - L1M4 LINE L1 -3113 3033 2453 * 8449 174 15 7 chr17 15133133 15134596 -70303884 + L1PB1 LINE L1 3025 4518 -1633 2203 114 0 0 chr17 15134596 15134886 -70303594 + AluSg SINE Alu 5 294 -16 8449 174 15 7 chr17 15134886 15136172 -70302308 + L1PB1 LINE L1 4518 5791 -360 297 66 55 44 chr17 15136173 15136264 -70302216 + (TA)n Simple_repeat Simple_repeat 2 93 0 2285 144 5 5 chr17 15136264 15136632 -70301848 + L1PB1 LINE L1 5776 6143 -8 848 99 7 70 chr17 15136651 15136793 -70301687 + MER50 LTR ERV1 537 669 -65 1189 201 64 18 chr17 15136819 15137102 -70301378 + MER39 LTR ERV1 412 707 0 1379 174 0 0 chr17 15137742 15137955 -70300525 - AluJb SINE Alu -16 296 84 22 35 0 0 chr17 15138172 15138201 -70300279 + AT_rich Low_complexity Low_complexity 1 29 0 330 306 16 16 chr17 15138511 15138635 -70299845 + MIR3 SINE MIR 49 172 -36 3056 39 3 0 chr17 15138666 15139028 -70299452 + L1PA5 LINE L1 5792 6154 0 680 321 65 6 chr17 15139127 15139553 -70298927 - L2 LINE L2 -309 3004 2535 1767 149 28 0 chr17 15139559 15139841 -70298639 + MER49 LTR ERV1 2 291 -632 1383 219 30 16 chr17 15139843 15140189 -70298291 + MER4D LTR ERV1 392 862 -41 2146 118 0 13 chr17 15140204 15140508 -70297972 - AluSx SINE Alu -12 300 1 192 200 0 0 chr17 15140571 15140621 -70297859 + (TA)n Simple_repeat Simple_repeat 2 51 0 225 191 0 0 chr17 15140623 15140665 -70297815 - L2 LINE L2 -846 2468 2427 449 185 12 12 chr17 15140955 15141036 -70297444 - MER90 LTR ERV1 0 614 534 385 278 184 31 chr17 15142578 15142833 -70295647 - MLT1L LTR MaLR -174 441 148 716 203 98 6 chr17 15142833 15142996 -70295484 + MER5B DNA MER1_type 1 178 0 249 167 0 0 chr17 15143230 15143284 -70295196 + (TA)n Simple_repeat Simple_repeat 2 55 0 1981 145 7 16 chr17 15143521 15143825 -70294655 - AluJb SINE Alu -9 303 3 717 186 70 6 chr17 15143826 15143982 -70294498 - MER5A DNA MER1_type -4 185 20 591 212 20 86 chr17 15144008 15144206 -70294274 + MER5A DNA MER1_type 5 189 0 180 259 111 0 chr17 15144212 15144266 -70294214 - MER5B DNA MER1_type -14 164 105 * 228 271 35 12 chr17 15144243 15144328 -70294152 + MER5B DNA MER1_type 87 173 -5 307 265 10 31 chr17 15144387 15144485 -70293995 - MER5A DNA MER1_type -85 104 9 305 164 99 81 chr17 15145005 15145086 -70293394 - MER8 DNA MER2_type -163 76 1 1956 116 0 34 chr17 15146899 15147214 -70291266 + AluSg SINE Alu 1 305 0 198 266 165 13 chr17 15147252 15147331 -70291149 + L2 LINE L2 3175 3265 -7 194 0 39 0 chr17 15147706 15147732 -70290748 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2267 116 0 0 chr17 15147739 15148032 -70290448 + AluSg SINE Alu 1 293 -17 2408 192 84 6 chr17 15149100 15149590 -70288890 + MER74A LTR ERVL 1 528 -30 580 239 33 33 chr17 15149722 15149906 -70288574 - MLT1F LTR MaLR -5 537 354 435 263 59 13 chr17 15149917 15150069 -70288411 - MIR SINE MIR -35 227 69 390 301 13 26 chr17 15150169 15150322 -70288158 + L2 LINE L2 3158 3308 -5 2350 106 0 0 chr17 15150634 15150936 -70287544 + AluSg SINE Alu 1 302 -8 198 0 0 0 chr17 15150939 15150961 -70287519 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 203 245 20 0 chr17 15150988 15151037 -70287443 + CT-rich Low_complexity Low_complexity 1 50 0 297 340 58 47 chr17 15151889 15152080 -70286400 - MIR3 SINE MIR -5 203 11 305 278 93 13 chr17 15153475 15153626 -70284854 + Charlie7 DNA MER1_type 2 164 -2448 2170 119 10 0 chr17 15153679 15153981 -70284499 - AluSx SINE Alu -7 305 1 248 327 30 0 chr17 15154227 15154328 -70284152 - MIR SINE MIR 0 262 159 3385 224 46 20 chr17 15154350 15155117 -70283363 - MER21B LTR ERV1 -58 805 19 312 329 0 67 chr17 15155142 15155291 -70283189 - MIR SINE MIR -119 143 5 2291 201 64 100 chr17 15157845 15158181 -70280299 - L1MC5 LINE L1 -416 7545 7199 1048 213 52 0 chr17 15158181 15158392 -70280088 + MER58A DNA MER1_type 1 222 -2 2291 201 64 100 chr17 15158392 15158606 -70279874 - L1MC5 LINE L1 -762 7199 6979 2165 119 0 0 chr17 15158606 15158923 -70279557 + AluSx SINE Alu 1 317 0 2291 201 64 100 chr17 15158923 15159402 -70279078 - L1MC5 LINE L1 -982 6979 6546 21 36 0 0 chr17 15159815 15159843 -70278637 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr17 15160046 15160070 -70278410 + (CA)n Simple_repeat Simple_repeat 2 25 0 2296 109 0 3 chr17 15160103 15160407 -70278073 - AluSq SINE Alu -10 303 1 25 0 0 0 chr17 15160593 15160618 -70277862 + AT_rich Low_complexity Low_complexity 1 25 0 2236 205 49 107 chr17 15161545 15162074 -70276406 - MER21B LTR ERV1 -127 736 178 213 39 0 0 chr17 15162074 15162100 -70276380 + (TA)n Simple_repeat Simple_repeat 2 27 0 2345 97 0 7 chr17 15162100 15162399 -70276081 - AluSx SINE Alu -15 297 1 2236 205 49 107 chr17 15162399 15162624 -70275856 - MER21B LTR ERV1 -683 180 25 233 128 21 0 chr17 15164302 15164349 -70274131 + CT-rich Low_complexity Low_complexity 3 50 0 441 75 25 25 chr17 15164367 15164447 -70274033 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 1400 191 37 58 chr17 15164456 15164750 -70273730 - AluJo SINE Alu -24 288 1 280 320 51 19 chr17 15165063 15165080 -70273400 - MIR3 SINE MIR -38 170 155 640 212 49 87 chr17 15165080 15165264 -70273216 - MER5B DNA MER1_type 0 178 2 280 320 51 19 chr17 15165264 15165402 -70273078 - MIR3 SINE MIR -53 155 10 456 263 136 24 chr17 15165960 15166173 -70272307 - MIR SINE MIR -3 259 23 580 251 84 48 chr17 15166381 15166608 -70271872 + LTR16A1 LTR ERVL 222 456 -1 503 271 43 21 chr17 15166610 15166798 -70271682 + HERV16 LTR ERVL 2 193 -4803 969 354 18 11 chr17 15166813 15167254 -70271226 + HERVL LTR ERVL 1856 2299 -3355 3610 342 78 25 chr17 15167286 15169834 -70268646 + HERVL LTR ERVL 2422 5103 -661 460 355 58 24 chr17 15170687 15171101 -70267379 - HERV16 LTR ERVL -4396 600 173 23 0 0 0 chr17 15171708 15171731 -70266749 + AT_rich Low_complexity Low_complexity 1 23 0 2518 57 0 0 chr17 15173142 15173439 -70265041 - AluY SINE Alu -14 297 1 2155 141 0 0 chr17 15174203 15174501 -70263979 - AluSx SINE Alu -14 298 1 227 140 20 0 chr17 15174977 15175027 -70263453 + CT-rich Low_complexity Low_complexity 2 52 0 682 291 78 48 chr17 15175276 15175684 -70262796 - HAL1 LINE L1 -7 2500 2073 2311 62 38 0 chr17 15175684 15175972 -70262508 - AluY SINE Alu -12 299 1 682 291 78 48 chr17 15175972 15176065 -70262415 - HAL1 LINE L1 -434 2073 1984 201 308 12 136 chr17 15176167 15176336 -70262144 + L2 LINE L2 3038 3185 -87 192 333 45 0 chr17 15176578 15176644 -70261836 - MIR SINE MIR -182 80 12 234 261 56 50 chr17 15177520 15177681 -70260799 - MIR3 SINE MIR -8 200 39 384 343 105 18 chr17 15178003 15178468 -70260012 + L2 LINE L2 2764 3264 -49 225 369 0 0 chr17 15179328 15179412 -70259068 - MIR SINE MIR -2 260 177 475 132 0 0 chr17 15179412 15179480 -70259000 - AluS SINE Alu -241 69 2 3530 132 37 70 chr17 15179482 15179876 -70258604 - LTR39 LTR ERV1 -158 625 220 1923 142 0 27 chr17 15179876 15180172 -70258308 + AluSx SINE Alu 1 288 -24 198 0 0 0 chr17 15180182 15180204 -70258276 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 3530 132 37 70 chr17 15180204 15180222 -70258258 - LTR39 LTR ERV1 -572 211 194 2446 129 56 8 chr17 15180222 15180618 -70257862 + L1PA15 LINE L1 5745 6159 -6 3530 132 37 70 chr17 15180618 15180839 -70257641 - LTR39 LTR ERV1 -589 194 1 2461 70 7 0 chr17 15181504 15181804 -70256676 + AluY SINE Alu 1 302 -9 253 298 0 0 chr17 15181877 15181934 -70256546 + MLT1K LTR MaLR 126 182 -406 744 187 8 0 chr17 15181973 15182096 -70256384 + FLAM_A SINE Alu 2 125 -8 211 26 0 53 chr17 15182951 15182989 -70255491 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 245 95 0 143 chr17 15183024 15183087 -70255393 - L1PA6 LINE L1 -1 6153 6100 1879 175 94 52 chr17 15183374 15183831 -70254649 - MER66B LTR ERV1 -10 476 1 2317 79 6 38 chr17 15184276 15184592 -70253888 - AluY SINE Alu -5 306 1 24 53 0 0 chr17 15184827 15184865 -70253615 + AT_rich Low_complexity Low_complexity 1 38 0 382 254 103 48 chr17 15185460 15185968 -70252512 + L1ME LINE L1 5294 5822 -299 21 0 0 0 chr17 15186054 15186075 -70252405 + AT_rich Low_complexity Low_complexity 1 21 0 655 266 38 76 chr17 15186492 15186755 -70251725 - MIR SINE MIR 0 262 10 822 223 16 21 chr17 15188410 15188652 -70249828 + MER33 DNA MER1_type 1 241 -83 590 295 79 27 chr17 15188645 15189052 -70249428 + LTR33 LTR ERVL 32 459 -62 * 805 222 0 0 chr17 15189562 15189715 -70248765 + FRAM SINE Alu 10 162 -14 25 0 0 0 chr17 15190037 15190062 -70248418 + AT_rich Low_complexity Low_complexity 1 25 0 670 309 21 0 chr17 15190086 15190274 -70248206 - MIR SINE MIR -67 195 4 543 276 19 0 chr17 15190834 15190990 -70247490 - MER63A DNA MER1_type -8 202 44 321 223 75 11 chr17 15191323 15191417 -70247063 + MLT1K LTR MaLR 455 554 -34 209 492 0 0 chr17 15191903 15192025 -70246455 + L2 LINE L2 2844 2965 -349 1230 248 46 39 chr17 15192806 15193238 -70245242 - LTR16A LTR ERVL 0 450 16 243 211 18 35 chr17 15193514 15193571 -70244909 - MER115 DNA AcHobo 0 693 638 396 301 37 0 chr17 15193672 15193808 -70244672 - MER115 DNA AcHobo -437 256 116 2096 98 41 0 chr17 15193865 15194160 -70244320 + AluSx SINE Alu 1 307 -5 1998 121 10 17 chr17 15194200 15194497 -70243983 + AluSg SINE Alu 1 295 -15 2483 259 77 44 chr17 15194553 15194640 -70243840 - L1ME LINE L1 -4880 1200 1117 2399 74 7 3 chr17 15194640 15194950 -70243530 - AluY SINE Alu 0 311 1 2483 259 77 44 chr17 15194950 15196038 -70242442 - L1ME LINE L1 -4963 1117 8 266 240 325 5 chr17 15196862 15197062 -70241418 - LTR33A LTR ERVL -136 387 124 720 226 0 0 chr17 15197235 15197368 -70241112 + FLAM_C SINE Alu 1 133 0 292 216 20 10 chr17 15198620 15198722 -70239758 + GA-rich Low_complexity Low_complexity 2 104 0 2414 76 0 13 chr17 15200585 15200888 -70237592 - AluY SINE Alu -11 300 2 772 308 9 0 chr17 15201100 15201314 -70237166 + MIR SINE MIR 46 261 -1 203 279 59 0 chr17 15201403 15201471 -70237009 + MIR SINE MIR 118 189 -73 2492 65 0 0 chr17 15202997 15203304 -70235176 + AluY SINE Alu 1 307 -4 2215 88 3 3 chr17 15203314 15203620 -70234860 + AluSx SINE Alu 1 306 0 440 314 71 53 chr17 15203624 15204130 -70234350 + L2 LINE L2 2292 2806 -508 2184 115 3 3 chr17 15204175 15204479 -70234001 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr17 15204636 15204657 -70233823 + AT_rich Low_complexity Low_complexity 1 21 0 251 286 102 62 chr17 15205193 15205281 -70233199 - L1MEd LINE L1 -2965 3164 3081 1549 134 85 19 chr17 15205281 15205588 -70232892 - L1MA4 LINE L1 -6 6294 5968 251 286 102 62 chr17 15205588 15205636 -70232844 - L1MEd LINE L1 -3048 3081 3036 2546 72 0 0 chr17 15205636 15205942 -70232538 - AluY SINE Alu -5 306 1 251 286 102 62 chr17 15205942 15206799 -70231681 - L1MEd LINE L1 -3093 3036 2130 300 345 76 48 chr17 15207095 15207593 -70230887 - L1MEd LINE L1 -5340 779 268 583 336 42 29 chr17 15210126 15210438 -70228042 - MER115 DNA AcHobo -376 317 2 182 357 0 0 chr17 15210472 15210542 -70227938 - L2 LINE L2 0 3313 3244 237 203 0 54 chr17 15210545 15210619 -70227861 - MARNA DNA Mariner -14 572 503 233 254 18 0 chr17 15210702 15210757 -70227723 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 222 310 60 40 chr17 15210761 15210861 -70227619 - MIR3 SINE MIR -39 169 68 2552 33 0 3 chr17 15211889 15212191 -70226289 + L1PA5 LINE L1 5845 6145 -9 220 122 61 0 chr17 15212206 15212255 -70226225 + A-rich Low_complexity Low_complexity 2 53 0 300 325 64 32 chr17 15212531 15212719 -70225761 + L1ME LINE L1 1053 1246 -4959 181 364 0 0 chr17 15212933 15212988 -70225492 - L2 LINE L2 -18 3254 3200 1508 186 0 24 chr17 15213149 15213401 -70225079 + AluJo SINE Alu 28 273 -39 337 256 54 50 chr17 15213782 15213883 -70224597 - MER97c DNA MER1_type? -2 1088 989 2214 122 0 3 chr17 15213883 15214186 -70224294 + AluSx SINE Alu 1 302 -10 337 256 54 50 chr17 15214186 15214342 -70224138 - MER97c DNA MER1_type? -101 989 830 6267 173 36 28 chr17 15214363 15215486 -70222994 + L1MC3 LINE L1 6380 7519 -266 2255 80 3 14 chr17 15215486 15215805 -70222675 - AluSp SINE Alu 0 316 1 6267 173 36 28 chr17 15215805 15216060 -70222420 + L1MC3 LINE L1 7519 7770 -15 583 263 63 5 chr17 15216129 15216319 -70222161 - MER97a DNA MER1_type? -322 572 372 1426 169 27 4 chr17 15216346 15216607 -70221873 - Tigger3(Golem) DNA MER2_type 0 3029 2763 3582 82 8 34 chr17 15216612 15216805 -70221675 + L1PA8 LINE L1 5644 5841 -331 2295 63 3 3 chr17 15216805 15217112 -70221368 - AluY SINE Alu 0 307 1 3582 82 8 34 chr17 15217112 15217452 -70221028 + L1PA8 LINE L1 5841 6164 -8 344 269 156 19 chr17 15217472 15217632 -70220848 + L1ME LINE L1 1823 2004 -4392 281 178 178 44 chr17 15217990 15218170 -70220310 + L1ME LINE L1 2026 2229 -4167 3568 267 33 28 chr17 15218561 15219086 -70219394 + L1ME LINE L1 2387 2908 -3307 2826 16 0 0 chr17 15219086 15219399 -70219081 + AluYb8 SINE Alu 1 313 -5 3568 267 33 28 chr17 15219399 15220224 -70218256 + L1ME LINE L1 2908 3747 -2468 1734 166 0 46 chr17 15220224 15220369 -70218111 + AluJb SINE Alu 1 126 -186 2357 67 0 3 chr17 15220369 15220668 -70217812 + AluY SINE Alu 2 299 -12 1734 166 0 46 chr17 15220668 15220829 -70217651 + AluJb SINE Alu 126 293 -19 3568 267 33 28 chr17 15220829 15221003 -70217477 + L1ME LINE L1 3747 3919 -2296 1622 246 98 12 chr17 15221008 15221386 -70217094 + L1MD2 LINE L1 5733 6176 -183 318 26 0 0 chr17 15221386 15221425 -70217055 + (CA)n Simple_repeat Simple_repeat 2 40 0 1622 246 98 12 chr17 15221425 15221610 -70216870 + L1MD2 LINE L1 6176 6344 -15 370 114 14 0 chr17 15221648 15221718 -70216762 - Charlie4 DNA MER1_type -110 1851 1781 1955 237 60 47 chr17 15221727 15222584 -70215896 + L1ME LINE L1 3916 4783 -1432 1061 254 20 0 chr17 15222585 15222931 -70215549 + L1M4 LINE L1 2583 2935 -3211 380 306 33 25 chr17 15222951 15223072 -70215408 - MIR SINE MIR -113 149 28 934 251 35 0 chr17 15223218 15223421 -70215059 - MIR SINE MIR -51 211 2 23 86 0 0 chr17 15223511 15223569 -70214911 + AT_rich Low_complexity Low_complexity 1 58 0 1661 194 6 20 chr17 15223671 15224016 -70214464 + MER2 DNA MER2_type 6 345 0 2172 112 0 3 chr17 15224471 15224766 -70213714 + AluSc SINE Alu 1 294 -15 226 273 70 0 chr17 15224800 15224928 -70213552 + L1ME LINE L1 5703 5839 -351 1027 157 27 196 chr17 15227425 15227766 -70210714 - MLT1A1 LTR MaLR 0 365 113 2096 88 0 0 chr17 15227766 15228029 -70210451 - AluSc SINE Alu -33 276 14 1027 157 27 196 chr17 15228029 15228126 -70210354 - MLT1A1 LTR MaLR -252 113 1 325 319 149 37 chr17 15228239 15228741 -70209739 - L2 LINE L2 0 3313 2764 2321 113 0 0 chr17 15231018 15231329 -70207151 - AluSx SINE Alu -1 311 1 310 257 79 10 chr17 15231475 15231576 -70206904 + L2 LINE L2 3186 3293 -20 1181 170 166 106 chr17 15231696 15232146 -70206334 + MER39 LTR ERV1 4 561 -146 973 202 18 9 chr17 15232146 15232364 -70206116 - L1PA16 LINE L1 0 6166 5947 1181 170 166 106 chr17 15232364 15232521 -70205959 + MER39 LTR ERV1 561 707 0 1556 210 0 31 chr17 15234067 15234386 -70204094 + AluJb SINE Alu 1 309 -3 2498 78 0 0 chr17 15234391 15234700 -70203780 + AluY SINE Alu 1 309 -2 2024 129 0 14 chr17 15234709 15235035 -70203445 + AluSq SINE Alu 3 324 0 1336 155 12 85 chr17 15235616 15235810 -70202670 - MER33 DNA MER1_type -2261 324 164 2082 134 0 10 chr17 15235810 15236102 -70202378 + AluSx SINE Alu 1 289 -23 1336 155 12 85 chr17 15236102 15236248 -70202232 - MER33 DNA MER1_type -2421 164 9 628 207 0 57 chr17 15237896 15238036 -70200444 + FLAM_A SINE Alu 2 133 0 23 0 0 0 chr17 15238505 15238528 -70199952 + AT_rich Low_complexity Low_complexity 1 23 0 244 360 43 19 chr17 15238571 15238732 -70199748 - L2 LINE L2 -181 3091 2927 1764 181 55 5 chr17 15238918 15239362 -70199118 - MLT2B1 LTR ERVL 0 515 1 634 323 65 34 chr17 15239501 15240005 -70198475 - L2 LINE L2 -923 2391 1872 1144 103 0 36 chr17 15240054 15240241 -70198239 + AluSg/x SINE Alu 140 312 0 877 224 44 19 chr17 15240385 15240590 -70197890 + MER63A DNA MER1_type 1 210 0 196 306 45 27 chr17 15240944 15241055 -70197425 + L2 LINE L2 3199 3311 -2 2510 67 0 3 chr17 15241193 15241493 -70196987 + AluY SINE Alu 1 299 -12 314 262 131 91 chr17 15242490 15242887 -70195593 - MLT1K LTR MaLR -1 587 175 282 329 21 0 chr17 15242982 15243122 -70195358 - MIR SINE MIR -33 229 87 1987 226 110 17 chr17 15243144 15243568 -70194912 + LTR48B LTR ERV1 1 497 -147 4190 108 8 26 chr17 15243568 15243836 -70194644 - MER4A LTR ERV1 0 600 329 2136 101 3 58 chr17 15243836 15244163 -70194317 - AluSc SINE Alu 0 309 1 4190 108 8 26 chr17 15244163 15244505 -70193975 - MER4A LTR ERV1 -271 329 1 1987 226 110 17 chr17 15244505 15244669 -70193811 + LTR48B LTR ERV1 497 644 0 25 51 0 0 chr17 15245203 15245242 -70193238 + AT_rich Low_complexity Low_complexity 1 39 0 670 208 29 20 chr17 15247217 15247403 -70191077 - MER5A DNA MER1_type -1 177 1 300 250 52 52 chr17 15247407 15247523 -70190957 + MER5B DNA MER1_type 2 117 -61 2212 108 14 7 chr17 15248031 15248328 -70190152 - AluSx SINE Alu -13 299 1 509 286 105 64 chr17 15248639 15250110 -70188370 + L1P5 LINE L1 3913 5456 -700 249 139 0 0 chr17 15250146 15250189 -70188291 + (ATG)n Simple_repeat Simple_repeat 3 45 0 410 234 11 0 chr17 15250235 15250329 -70188151 - MIR SINE MIR -46 216 122 619 224 92 6 chr17 15250330 15250504 -70187976 + MER112 DNA MER1_type 71 259 -1 533 236 242 53 chr17 15251421 15251760 -70186720 + MLT1I LTR MaLR 5 407 -2 740 202 31 103 chr17 15252345 15252449 -70186031 - MER63A DNA MER1_type -1481 207 126 1559 194 27 3 chr17 15252449 15252742 -70185738 - AluJo SINE Alu -12 300 1 740 202 31 103 chr17 15252742 15252860 -70185620 - MER63A DNA MER1_type -1562 126 1 203 292 22 56 chr17 15253068 15253157 -70185323 - L2 LINE L2 -50 3263 3178 696 280 95 85 chr17 15253308 15253770 -70184710 + MLT1K LTR MaLR 66 535 -53 1331 99 103 24 chr17 15253770 15253891 -70184589 + MER30 DNA MER1_type 1 111 -119 234 0 0 0 chr17 15253891 15253917 -70184563 + (TA)n Simple_repeat Simple_repeat 2 27 0 1331 99 103 24 chr17 15253917 15254008 -70184472 + MER30 DNA MER1_type 111 230 0 696 280 95 85 chr17 15254008 15254063 -70184417 + MLT1K LTR MaLR 535 588 0 226 302 42 10 chr17 15255528 15255624 -70182856 - L1MC4 LINE L1 -1327 6715 6617 195 42 0 0 chr17 15255624 15255648 -70182832 + (TG)n Simple_repeat Simple_repeat 2 25 0 231 219 164 52 chr17 15255868 15255986 -70182494 + MIR SINE MIR 22 146 -62 281 270 126 6 chr17 15256779 15256938 -70181542 - MIR SINE MIR -24 238 61 198 307 164 0 chr17 15257087 15257227 -70181253 - MIR SINE MIR -21 241 79 2407 90 0 10 chr17 15257438 15257750 -70180730 + AluSg SINE Alu 1 309 -1 377 167 26 0 chr17 15258647 15258725 -70179755 - MER116 DNA Mariner 0 80 1 349 270 36 105 chr17 15259086 15259334 -70179146 + L2 LINE L2 2233 2463 -851 327 145 66 13 chr17 15261178 15261254 -70177226 - MER116 DNA Mariner 0 80 1 350 54 36 0 chr17 15262417 15262473 -70176007 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2214 120 0 10 chr17 15262649 15262957 -70175523 + AluSx SINE Alu 1 305 -7 2049 141 3 7 chr17 15263475 15263781 -70174699 - AluSx SINE Alu -7 305 1 736 277 96 38 chr17 15263846 15264293 -70174187 + LTR16C LTR ERVL 19 491 0 376 226 60 0 chr17 15264977 15265110 -70173370 + L1ME4a LINE L1 5965 6105 -16 334 305 52 46 chr17 15265185 15265359 -70173121 - L2 LINE L2 -36 3277 3103 1592 183 16 65 chr17 15265401 15265773 -70172707 - MLT1A1 LTR MaLR -8 357 4 2298 109 6 3 chr17 15267120 15267432 -70171048 + AluSq SINE Alu 1 313 0 2553 48 13 10 chr17 15267579 15267764 -70170716 - AluY SINE Alu 0 311 123 315 0 0 0 chr17 15267764 15267799 -70170681 + (TG)n Simple_repeat Simple_repeat 2 36 0 2553 48 13 10 chr17 15267799 15267923 -70170557 - AluY SINE Alu -188 123 1 544 241 56 12 chr17 15268111 15268273 -70170207 + L1ME1 LINE L1 5994 6162 -4 370 241 0 68 chr17 15269176 15269367 -70169113 + C-rich Low_complexity Low_complexity 2 179 0 740 287 75 47 chr17 15269503 15269667 -70168813 - LTR33 LTR ERVL -2 519 361 997 156 21 11 chr17 15269667 15269853 -70168627 + MER53 DNA DNA 1 188 -1 740 287 75 47 chr17 15269853 15270179 -70168301 - LTR33 LTR ERVL -160 361 15 2416 67 0 3 chr17 15270618 15270915 -70167565 + AluY SINE Alu 3 298 -13 200 95 0 71 chr17 15271171 15271213 -70167267 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 2453 82 0 0 chr17 15271623 15271927 -70166553 + AluSg SINE Alu 1 304 -6 1552 189 102 23 chr17 15274139 15274493 -70163987 + MLT1B LTR MaLR 1 382 -8 1544 211 50 21 chr17 15274548 15274885 -70163595 - MLT1C LTR MaLR -9 458 112 298 164 33 0 chr17 15274889 15274950 -70163530 - L1MA9 LINE L1 -10 6302 6240 2081 124 7 0 chr17 15274959 15275279 -70163201 - AluSp SINE Alu 0 322 1 414 163 35 12 chr17 15275323 15275404 -70163076 - MLT1C LTR MaLR -343 124 42 2259 177 71 8 chr17 15275404 15275879 -70162601 + LTR27 LTR ERV1 3 574 -149 227 299 0 15 chr17 15275944 15276011 -70162469 + LTR28 LTR ERV1 954 1019 -1 279 0 0 0 chr17 15277153 15277184 -70161296 + (TG)n Simple_repeat Simple_repeat 1 31 0 213 94 0 0 chr17 15278120 15278152 -70160328 + (CAT)n Simple_repeat Simple_repeat 2 33 0 286 265 62 62 chr17 15278337 15278548 -70159932 + L1MC4a LINE L1 5719 5929 -1879 813 158 8 0 chr17 15279011 15279138 -70159342 + FLAM_A SINE Alu 1 128 -5 540 231 20 27 chr17 15279920 15280067 -70158413 + MER103 DNA DNA 1 146 -20 433 206 10 0 chr17 15280354 15280456 -70158024 + MER5A DNA MER1_type 7 109 -80 422 206 219 19 chr17 15284205 15284360 -70154120 + MER5A DNA MER1_type 4 189 0 3666 204 95 51 chr17 15284521 15284886 -70153594 + L1MD2 LINE L1 5079 5426 -933 2542 38 0 0 chr17 15284886 15285176 -70153304 + AluY SINE Alu 1 290 -21 3666 204 95 51 chr17 15285176 15285189 -70153291 + L1MD2 LINE L1 5426 5437 -922 1975 165 94 13 chr17 15285189 15285583 -70152897 + MSTB LTR MaLR 1 426 0 3666 204 95 51 chr17 15285583 15286424 -70152056 + L1MD2 LINE L1 5437 6346 -13 467 241 28 88 chr17 15286481 15286697 -70151783 + MER63A DNA MER1_type 8 210 0 209 271 47 156 chr17 15286715 15286773 -70151707 + MER5A DNA MER1_type 18 81 -108 2524 60 0 0 chr17 15286773 15287074 -70151406 + AluSc SINE Alu 1 301 -8 209 271 47 156 chr17 15287074 15287085 -70151395 + MER5A DNA MER1_type 81 92 -97 2109 88 70 0 chr17 15287085 15287369 -70151111 + AluSg SINE Alu 1 304 -6 209 271 47 156 chr17 15287369 15287490 -70150990 + MER5A DNA MER1_type 92 188 -1 865 200 28 39 chr17 15287876 15288056 -70150424 - MER5B DNA MER1_type 0 178 1 207 250 36 0 chr17 15288348 15288432 -70150048 + (TA)n Simple_repeat Simple_repeat 2 88 0 192 274 20 0 chr17 15290389 15290440 -70148040 - MIR3 SINE MIR -52 156 105 303 28 0 0 chr17 15290841 15290877 -70147603 + (A)n Simple_repeat Simple_repeat 1 36 0 183 295 90 57 chr17 15290932 15291054 -70147426 + MIR3 SINE MIR 67 192 -16 782 226 62 35 chr17 15291229 15291455 -70147025 - MER41E LTR ERV1 0 512 281 1320 172 85 108 chr17 15291476 15291979 -70146501 + MER66A LTR ERV1 99 478 0 861 270 0 14 chr17 15291979 15292169 -70146311 - MER41E LTR ERV1 -231 281 95 2115 123 47 37 chr17 15292489 15293042 -70145438 - MER51A LTR ERV1 -2 632 1 221 271 0 0 chr17 15293087 15293157 -70145323 + C-rich Low_complexity Low_complexity 1 70 0 1213 173 126 73 chr17 15293272 15293653 -70144827 + MER57A LTR ERV1 3 403 0 27 49 0 0 chr17 15294191 15294232 -70144248 + AT_rich Low_complexity Low_complexity 1 41 0 258 116 0 0 chr17 15294605 15294648 -70143832 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 389 255 18 44 chr17 15296182 15296319 -70142161 + MIR3 SINE MIR 56 193 -15 253 273 0 0 chr17 15296935 15296990 -70141490 + (TG)n Simple_repeat Simple_repeat 2 56 0 308 259 25 25 chr17 15298456 15298537 -70139943 + LTR67 LTR ERVL 92 172 -385 * 674 240 53 104 chr17 15298480 15298924 -70139556 + MLT1L LTR MaLR 110 614 -1 258 291 150 0 chr17 15299134 15299261 -70139219 + MIR SINE MIR 117 262 0 339 319 63 42 chr17 15299606 15299891 -70138589 - HAL1b LINE L1 -532 816 526 1616 248 116 60 chr17 15299911 15300427 -70138053 - L2 LINE L2 -443 2871 2310 493 175 0 0 chr17 15300427 15300507 -70137973 + MADE1 DNA Mariner 1 80 0 1616 248 116 60 chr17 15300507 15300636 -70137844 - L2 LINE L2 -1004 2310 2190 2623 42 0 10 chr17 15302157 15302468 -70136012 + AluY SINE Alu 1 308 -3 2267 112 0 0 chr17 15303461 15303765 -70134715 - AluY SINE Alu -7 304 1 1109 122 59 115 chr17 15304037 15304192 -70134288 + L1MA9 LINE L1 5958 6091 -221 2575 55 3 0 chr17 15304192 15304500 -70133980 + AluY SINE Alu 1 309 -2 1109 122 59 115 chr17 15304500 15304630 -70133850 + L1MA9 LINE L1 6091 6227 -85 2478 154 31 3 chr17 15304631 15305021 -70133459 + MER57A LTR ERV1 3 403 0 5284 138 10 9 chr17 15305036 15305826 -70132654 + MER57A-int LTR ERV1 16 806 -6731 2015 110 4 0 chr17 15305819 15306083 -70132397 + MER57A-int LTR ERV1 361 625 -5321 * 5121 138 42 10 chr17 15306072 15306905 -70131575 + MER57A-int LTR ERV1 1081 1940 -4006 * 20606 79 11 5 chr17 15306898 15309589 -70128891 + MER57A-int LTR ERV1 4411 7118 -419 660 142 50 8 chr17 15309601 15309721 -70128759 + LTR54B LTR ERV1 5 129 -369 1816 97 4 37 chr17 15309723 15309992 -70128488 + MER57A-int LTR ERV1 7278 7537 0 2491 162 18 0 chr17 15309992 15310388 -70128092 + MER57A LTR ERV1 1 403 0 1970 252 69 28 chr17 15311425 15311929 -70126551 + MER21B LTR ERV1 2 526 -337 1031 318 87 20 chr17 15312084 15312717 -70125763 + L2 LINE L2 1686 2360 -954 356 252 15 59 chr17 15312722 15312857 -70125623 - LTR33 LTR ERVL 0 521 393 * 635 264 121 0 chr17 15312854 15313036 -70125444 - LTR33 LTR ERVL -315 206 3 2467 145 35 40 chr17 15313043 15313471 -70125009 - MSTB LTR MaLR 0 426 1 367 293 16 16 chr17 15313750 15313873 -70124607 + L2 LINE L2 3179 3301 -12 368 309 39 55 chr17 15314815 15314996 -70123484 - MIR SINE MIR -64 198 21 395 19 19 0 chr17 15315507 15315559 -70122921 + (CA)n Simple_repeat Simple_repeat 2 54 0 21 0 0 0 chr17 15315830 15315851 -70122629 + AT_rich Low_complexity Low_complexity 1 21 0 270 274 48 12 chr17 15315877 15315961 -70122519 - MIR SINE MIR -117 145 59 409 284 28 0 chr17 15316265 15316374 -70122106 - L2 LINE L2 -8 3305 3194 1660 232 213 89 chr17 15316382 15316964 -70121516 - MLT1E2 LTR MaLR 0 626 1 610 350 150 20 chr17 15317043 15317328 -70121152 - L2 LINE L2 -296 3017 2771 2133 125 0 0 chr17 15317328 15317617 -70120863 - AluSg1 SINE Alu -20 289 1 610 350 150 20 chr17 15317617 15317817 -70120663 - L2 LINE L2 -542 2771 2496 411 327 60 44 chr17 15318644 15319259 -70119221 - L1M4 LINE L1 -2598 3548 2914 2611 26 3 13 chr17 15319259 15319563 -70118917 + AluY SINE Alu 1 301 -10 411 327 60 44 chr17 15319563 15319796 -70118684 - L1M4 LINE L1 -3232 2914 2686 310 269 50 28 chr17 15320117 15320258 -70118222 + L1MC/D LINE L1 4903 5046 -1100 3368 134 81 10 chr17 15320573 15321065 -70117415 - MER1A DNA MER1_type 0 527 1 796 319 57 24 chr17 15321713 15322253 -70116227 + L1MC/D LINE L1 5272 5829 -302 6074 115 13 9 chr17 15322339 15323280 -70115200 + L1PA14 LINE L1 5209 6161 0 2359 98 0 0 chr17 15323780 15324075 -70114405 + AluSx SINE Alu 1 295 -17 309 318 184 21 chr17 15324575 15324686 -70113794 + L1ME LINE L1 5391 5483 -638 703 160 38 46 chr17 15324686 15324817 -70113663 + FLAM_A SINE Alu 4 133 0 309 318 184 21 chr17 15324817 15324938 -70113542 + L1ME LINE L1 5483 5661 -460 21 0 0 0 chr17 15324996 15325017 -70113463 + AT_rich Low_complexity Low_complexity 1 21 0 1783 55 0 18 chr17 15325167 15325542 -70112938 + AluY SINE Alu 70 440 0 23 0 0 0 chr17 15325959 15325982 -70112498 + AT_rich Low_complexity Low_complexity 1 23 0 323 290 143 36 chr17 15326074 15326326 -70112154 - L1M4 LINE L1 -1550 4596 4318 198 0 0 0 chr17 15326432 15326454 -70112026 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1904 97 3 80 chr17 15326454 15326754 -70111726 - AluSc SINE Alu -32 277 1 374 345 31 63 chr17 15326870 15327189 -70111291 - L1M4 LINE L1 -2244 3902 3594 403 297 36 0 chr17 15327445 15327583 -70110897 + L1ME4a LINE L1 5974 6116 -5 202 225 0 0 chr17 15328662 15328702 -70109778 + CT-rich Low_complexity Low_complexity 1 40 0 381 252 26 73 chr17 15328987 15329138 -70109342 - MIR SINE MIR -55 207 64 229 342 26 9 chr17 15329149 15329263 -70109217 + L2 LINE L2 3148 3263 -9 180 281 101 73 chr17 15329407 15329567 -70108913 + L2 LINE L2 3130 3297 -16 2186 93 0 7 chr17 15329567 15329857 -70108623 + AluSq SINE Alu 1 288 -25 180 281 101 73 chr17 15329857 15329874 -70108606 + L2 LINE L2 3297 3312 -1 2349 64 3 10 chr17 15329980 15330277 -70108203 + AluSg SINE Alu 1 295 -15 251 266 133 58 chr17 15330641 15330829 -70107651 - MIR3 SINE MIR -4 204 3 482 273 84 26 chr17 15331902 15332056 -70106424 - MLT1L LTR MaLR -43 572 410 417 223 36 18 chr17 15332093 15332205 -70106275 - MLT1L LTR MaLR -298 317 204 274 191 48 16 chr17 15332178 15332241 -70106239 - MLT1J LTR MaLR -344 167 103 * 189 171 0 0 chr17 15332476 15332511 -70105969 + (CA)n Simple_repeat Simple_repeat 2 36 0 241 133 0 0 chr17 15332515 15332560 -70105920 - L1MC4 LINE L1 -1339 6703 6659 564 174 11 49 chr17 15332588 15332772 -70105708 + (CATATA)n Simple_repeat Simple_repeat 1 177 0 406 344 31 0 chr17 15332783 15332911 -70105569 - L2 LINE L2 0 3313 3182 211 233 0 0 chr17 15334165 15334208 -70104272 + MIR SINE MIR 88 130 -132 2434 59 0 23 chr17 15334208 15334574 -70103906 - AluY SINE Alu 0 359 1 204 293 61 30 chr17 15335325 15335424 -70103056 + L2 LINE L2 3150 3251 -62 215 169 0 68 chr17 15335686 15335745 -70102735 + A-rich Low_complexity Low_complexity 3 57 0 527 281 106 21 chr17 15335775 15336202 -70102278 + L1MC/D LINE L1 5265 5723 -689 1821 125 0 55 chr17 15336362 15336651 -70101829 + AluSx SINE Alu 39 311 -1 736 251 6 27 chr17 15337239 15337422 -70101058 + MER63A DNA MER1_type 24 202 -8 910 253 71 65 chr17 15337558 15338098 -70100382 + MER39 LTR ERV1 6 707 0 1762 175 0 7 chr17 15338259 15338567 -70099913 + AluJb SINE Alu 1 306 -6 189 0 0 0 chr17 15339384 15339405 -70099075 + (A)n Simple_repeat Simple_repeat 1 21 0 210 339 12 29 chr17 15339997 15340135 -70098345 + MIR SINE MIR 5 140 -68 2313 53 9 40 chr17 15340199 15340520 -70097960 - AluY SINE Alu 0 311 1 2733 140 37 18 chr17 15341119 15341576 -70096904 + LTR39 LTR ERV1 3 468 -315 461 169 0 36 chr17 15341578 15341661 -70096819 + LTR39 LTR ERV1 704 783 0 192 40 0 0 chr17 15341680 15341705 -70096775 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1015 197 106 8 chr17 15341928 15342065 -70096415 - L1MA9 LINE L1 -3 6309 6187 339 78 0 0 chr17 15342065 15342116 -70096364 + (TG)n Simple_repeat Simple_repeat 2 52 0 1015 197 106 8 chr17 15342116 15342242 -70096238 - L1MA9 LINE L1 -125 6187 6020 2743 145 18 35 chr17 15342549 15342836 -70095644 + MER31A LTR ERV1 1 278 -207 2244 58 41 3 chr17 15342836 15343128 -70095352 - AluY SINE Alu -8 303 1 2743 145 18 35 chr17 15343128 15343329 -70095151 + MER31A LTR ERV1 278 481 -4 1558 183 31 9 chr17 15343770 15344087 -70094393 + L1MA3 LINE L1 5978 6301 -4 21 0 0 0 chr17 15344151 15344172 -70094308 + AT_rich Low_complexity Low_complexity 1 21 0 265 211 0 0 chr17 15344603 15344655 -70093825 + MER72 LTR ERV1 410 461 -261 549 192 103 51 chr17 15344697 15344911 -70093569 + LTR45B LTR ERV1 264 488 -1 634 267 41 23 chr17 15344920 15345092 -70093388 + LTR33 LTR ERVL 101 275 -246 273 208 0 0 chr17 15345198 15345251 -70093229 + LTR33 LTR ERVL 469 521 0 330 347 67 51 chr17 15345251 15345582 -70092898 - L1M4 LINE L1 -2489 3657 3322 826 336 59 29 chr17 15345698 15346145 -70092335 + LTR67 LTR ERVL 9 476 -81 1895 191 18 25 chr17 15346145 15346538 -70091942 + MLT1B LTR MaLR 1 390 0 826 336 59 29 chr17 15346538 15346617 -70091863 + LTR67 LTR ERVL 476 551 -6 2408 252 49 60 chr17 15346645 15347029 -70091451 + L1ME LINE L1 6 393 -5677 2306 81 0 7 chr17 15347029 15347339 -70091141 + AluY SINE Alu 1 308 -3 2408 252 49 60 chr17 15347339 15347850 -70090630 + L1ME LINE L1 393 891 -5179 2297 87 3 3 chr17 15347971 15348280 -70090200 + AluSg1 SINE Alu 1 309 0 881 118 0 37 chr17 15350417 15350500 -70087980 - FLAM_C SINE Alu -181 131 53 4630 138 35 17 chr17 15350500 15351271 -70087209 - LTR1 LTR ERV1 0 785 1 881 118 0 37 chr17 15351271 15351323 -70087157 - FLAM_C SINE Alu -259 53 1 504 262 89 76 chr17 15351514 15351976 -70086504 + MLT1K LTR MaLR 5 472 -4 329 278 21 10 chr17 15352163 15352260 -70086220 - MIR SINE MIR 0 262 165 229 211 88 0 chr17 15352263 15352320 -70086160 - MIR SINE MIR -75 187 126 195 374 30 30 chr17 15352789 15352861 -70085619 - L2 LINE L2 -220 3052 2978 321 47 0 0 chr17 15352861 15352904 -70085576 + (TG)n Simple_repeat Simple_repeat 2 44 0 195 374 30 30 chr17 15352904 15352962 -70085518 - L2 LINE L2 -293 2979 2922 2445 56 3 0 chr17 15352969 15353272 -70085208 - AluY SINE Alu -7 304 1 1294 222 52 48 chr17 15353276 15353794 -70084686 + MLT1F1 LTR MaLR 1 593 0 463 323 24 12 chr17 15353860 15354027 -70084453 - MER5A DNA MER1_type -13 176 8 369 327 19 19 chr17 15354346 15354505 -70083975 + MARNA DNA Mariner 40 198 -388 202 284 45 0 chr17 15354585 15354652 -70083828 - MIR3 SINE MIR -41 167 98 2072 116 7 7 chr17 15355147 15355448 -70083032 - AluSx SINE Alu -11 301 1 1173 219 17 41 chr17 15355680 15355972 -70082508 + LTR16C LTR ERVL 207 491 0 589 256 152 105 chr17 15356270 15356699 -70081781 + L2 LINE L2 2725 3132 -181 2236 85 0 3 chr17 15356699 15357004 -70081476 + AluY SINE Alu 1 304 -7 589 256 152 105 chr17 15357004 15357054 -70081426 + L2 LINE L2 3132 3178 -135 2023 90 20 17 chr17 15357054 15357353 -70081127 - AluSq SINE Alu -1 312 13 589 256 152 105 chr17 15357353 15357447 -70081033 + L2 LINE L2 3178 3309 -4 418 274 83 6 chr17 15357537 15357694 -70080786 - L1MC4a LINE L1 -1945 5863 5695 296 378 0 0 chr17 15357737 15357848 -70080632 - L1MC4a LINE L1 -529 5592 5482 * 2172 56 0 6 chr17 15357834 15357852 -70080628 + L1PA8 LINE L1 5698 5715 -457 995 61 7 41 chr17 15357852 15357999 -70080481 - L1PA8 LINE L1 -5 6167 6026 2172 56 0 6 chr17 15357999 15358267 -70080213 + L1PA8 LINE L1 5715 5981 -191 1706 66 4 85 chr17 15358267 15358322 -70080158 + L1P LINE L1 5132 5190 -956 1777 79 12 8 chr17 15358322 15358563 -70079917 + AluY SINE Alu 16 257 -54 1706 66 4 85 chr17 15358563 15358576 -70079904 + L1P LINE L1 5190 5202 -944 198 0 0 0 chr17 15358576 15358598 -70079882 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1706 66 4 85 chr17 15358598 15358799 -70079681 + L1P LINE L1 5202 5380 -766 856 308 76 50 chr17 15358854 15359509 -70078971 - L1MC4a LINE L1 -752 5394 4723 395 252 25 17 chr17 15361246 15361365 -70077115 - MIR SINE MIR -14 248 129 651 235 44 49 chr17 15361434 15361617 -70076863 - MER63A DNA MER1_type -2 208 27 2294 61 0 3 chr17 15361719 15362012 -70076468 - AluY SINE Alu -17 294 3 2098 119 0 0 chr17 15362092 15362386 -70076094 + AluSx SINE Alu 3 296 -16 264 329 102 22 chr17 15364066 15364203 -70074277 + L3 LINE CR1 1427 1574 -3 216 263 105 79 chr17 15364362 15364514 -70073966 + L2 LINE L2 3126 3281 -32 1534 182 40 85 chr17 15366330 15366731 -70071749 + MLT1B LTR MaLR 8 390 0 27 0 0 0 chr17 15367659 15367686 -70070794 + AT_rich Low_complexity Low_complexity 1 27 0 1614 165 26 10 chr17 15367829 15368132 -70070348 - AluJb SINE Alu -4 308 1 325 280 120 47 chr17 15368210 15368360 -70070120 - HAL1b LINE L1 0 1348 1188 246 32 0 0 chr17 15369710 15369741 -70068739 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2598 136 56 21 chr17 15370269 15370314 -70068166 - L1MB3 LINE L1 -7 6176 6134 1830 151 3 22 chr17 15370314 15370632 -70067848 - 7SLRNA srpRNA srpRNA -8 312 1 2598 136 56 21 chr17 15370632 15370915 -70067565 - L1MB3 LINE L1 -49 6134 5823 2161 106 7 0 chr17 15370915 15371218 -70067262 - AluSx SINE Alu -6 306 2 2598 136 56 21 chr17 15371218 15371367 -70067113 - L1MB3 LINE L1 -360 5823 5681 316 109 0 0 chr17 15371379 15371425 -70067055 - L1MD2 LINE L1 -25 6334 6289 500 180 150 0 chr17 15371430 15371530 -70066950 - L1MD2 LINE L1 -208 6151 6037 838 206 66 66 chr17 15371927 15372228 -70066252 - MER33 DNA MER1_type 0 324 24 341 227 80 0 chr17 15373199 15373274 -70065206 + Tigger3(Golem) DNA MER2_type 1 81 -2948 * 581 202 0 0 chr17 15373272 15373366 -70065114 + Tigger3(Golem) DNA MER2_type 2919 3012 -17 441 252 10 0 chr17 15373374 15373477 -70065003 + Charlie5 DNA MER1_type 2481 2584 -28 517 274 60 35 chr17 15373496 15373645 -70064835 + MIR3 SINE MIR 17 169 -39 203 275 14 29 chr17 15374664 15374733 -70063747 - MIR SINE MIR -187 75 8 2288 117 17 50 chr17 15374808 15375211 -70063269 - MLT1B LTR MaLR 0 390 1 365 343 161 16 chr17 15376005 15376428 -70062052 + L2 LINE L2 2371 2854 -460 273 384 75 31 chr17 15376488 15376589 -70061891 + L2 LINE L2 2966 3061 -211 8238 111 9 46 chr17 15376589 15377741 -70060739 + HSMAR2 DNA Mariner 2 1195 -107 2308 88 7 3 chr17 15377741 15378048 -70060432 + AluSx SINE Alu 1 308 -4 8238 111 9 46 chr17 15378048 15378088 -70060392 + HSMAR2 DNA Mariner 1195 1235 -67 2422 58 0 19 chr17 15378088 15378399 -70060081 - AluY SINE Alu -6 305 1 8238 111 9 46 chr17 15378399 15378554 -70059926 + HSMAR2 DNA Mariner 1235 1300 -2 273 384 75 31 chr17 15378554 15378746 -70059734 + L2 LINE L2 3061 3272 0 333 0 0 0 chr17 15378863 15378900 -70059580 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1738 138 4 14 chr17 15378916 15379191 -70059289 - AluSx SINE Alu -28 284 13 1320 261 80 39 chr17 15379950 15380437 -70058043 + HAL1 LINE L1 1 507 -2000 2046 125 3 3 chr17 15381423 15381775 -70056705 - AluSx SINE Alu 0 352 1 268 98 0 273 chr17 15382098 15382174 -70056306 - L1MB3 LINE L1 0 6183 6156 2404 70 0 10 chr17 15382174 15382487 -70055993 - AluY SINE Alu -1 310 1 268 98 0 273 chr17 15382487 15382542 -70055938 - L1MB3 LINE L1 -27 6156 6088 1407 107 5 0 chr17 15383010 15383227 -70055253 + AluSq SINE Alu 87 304 0 301 174 174 0 chr17 15383265 15383334 -70055146 + MIR SINE MIR 110 190 -72 669 278 55 93 chr17 15384355 15384643 -70053837 + MLT1J LTR MaLR 33 307 -204 2146 107 0 0 chr17 15384643 15384933 -70053547 - AluSg SINE Alu -20 290 1 669 278 55 93 chr17 15384933 15384989 -70053491 + MLT1J LTR MaLR 307 364 -147 183 353 82 55 chr17 15385115 15385370 -70053110 - L2 LINE L2 -337 2977 2716 272 311 39 0 chr17 15386355 15386458 -70052022 + MIR3 SINE MIR 99 205 -3 2366 187 24 2 chr17 15386951 15387368 -70051112 - MSTB LTR MaLR 0 426 1 295 344 30 23 chr17 15388518 15388649 -70049831 + L2 LINE L2 2965 3096 -176 1305 232 87 65 chr17 15389530 15390022 -70048458 - MLT1J LTR MaLR -8 503 1 314 204 174 23 chr17 15391045 15391130 -70047350 - L1MA10 LINE L1 -5 6329 6245 1408 197 51 120 chr17 15391130 15391662 -70046818 - L1ME1 LINE L1 -101 6065 5571 * 4894 176 69 26 chr17 15391644 15392359 -70046121 - L1MD2 LINE L1 -2 6357 5575 2339 64 37 0 chr17 15392359 15392654 -70045826 + AluSc SINE Alu 1 306 -3 4894 176 69 26 chr17 15392654 15393062 -70045418 - L1MD2 LINE L1 -784 5575 5186 1595 192 46 8 chr17 15393064 15393454 -70045026 - L1ME1 LINE L1 -562 5604 5206 236 229 106 59 chr17 15393779 15393949 -70044531 - L1M4 LINE L1 -765 5381 5204 642 145 0 86 chr17 15393971 15394088 -70044392 - AluJo SINE Alu -177 135 29 258 105 0 0 chr17 15394097 15394135 -70044345 + (T)n Simple_repeat Simple_repeat 1 38 0 327 314 47 52 chr17 15394320 15394492 -70043988 + MIR3 SINE MIR 20 190 -18 391 273 62 3 chr17 15394746 15394881 -70043599 + MIR SINE MIR 2 142 -66 664 269 63 47 chr17 15395052 15395353 -70043127 + L1ME4a LINE L1 5521 5826 -295 461 272 82 6 chr17 15395356 15395514 -70042966 + MIR SINE MIR 3 172 -90 506 272 71 28 chr17 15395911 15396136 -70042344 - MIR SINE MIR 0 262 31 245 266 101 9 chr17 15396366 15396475 -70042005 - MER117 DNA MER1_type -78 119 1 717 319 76 0 chr17 15397479 15397717 -70040763 - MIR SINE MIR -6 256 1 1903 225 67 44 chr17 15397748 15397828 -70040652 - MER82 DNA MER2_type 0 653 576 2235 85 0 36 chr17 15397828 15398133 -70040347 + AluY SINE Alu 1 294 -17 1903 225 67 44 chr17 15398133 15398603 -70039877 - MER82 DNA MER2_type -77 576 90 2281 108 0 9 chr17 15398740 15399056 -70039424 + AluSq SINE Alu 1 313 0 2448 65 0 23 chr17 15399316 15399622 -70038858 - AluY SINE Alu -12 299 1 204 306 115 87 chr17 15400373 15400556 -70037924 - MIR SINE MIR -33 229 42 349 244 118 17 chr17 15400623 15400742 -70037738 + MIR SINE MIR 34 164 -98 2340 94 3 0 chr17 15402209 15402518 -70035962 + AluSp SINE Alu 1 310 -3 2701 139 45 9 chr17 15402822 15403269 -70035211 - L1MB3 LINE L1 -4 6179 5717 237 301 4 111 chr17 15403719 15403981 -70034499 + HAL1 LINE L1 105 338 -2169 1022 247 113 111 chr17 15404309 15404759 -70033721 + HAL1 LINE L1 767 1220 -1287 2368 99 3 0 chr17 15404759 15405062 -70033418 - AluSx SINE Alu -8 304 1 1022 247 113 111 chr17 15405062 15405491 -70032989 + HAL1 LINE L1 1220 1647 -860 734 226 14 7 chr17 15405492 15405638 -70032842 + Tigger3(Golem) DNA MER2_type 1 147 -2882 * 5791 122 39 34 chr17 15405610 15405978 -70032502 + Tigger3(Golem) DNA MER2_type 2041 2406 -623 2315 101 3 0 chr17 15405978 15406275 -70032205 - AluSp SINE Alu -15 298 1 5791 122 39 34 chr17 15406275 15406404 -70032076 + Tigger3(Golem) DNA MER2_type 2406 2533 -496 2393 62 0 16 chr17 15406404 15406712 -70031768 - AluY SINE Alu -8 303 1 5791 122 39 34 chr17 15406712 15407196 -70031284 + Tigger3(Golem) DNA MER2_type 2533 3028 -1 317 271 26 65 chr17 15407210 15407365 -70031115 + HAL1 LINE L1 1660 1808 -699 24 0 0 0 chr17 15407558 15407582 -70030898 + AT_rich Low_complexity Low_complexity 1 24 0 268 261 106 43 chr17 15407584 15407772 -70030708 + HAL1 LINE L1 2099 2298 -209 24 50 0 33 chr17 15407833 15407868 -70030612 + AT_rich Low_complexity Low_complexity 1 35 -23 2054 109 51 0 chr17 15407868 15408162 -70030318 + AluSq SINE Alu 1 309 -4 24 50 0 33 chr17 15408162 15408186 -70030294 + AT_rich Low_complexity Low_complexity 35 58 0 267 294 77 0 chr17 15408192 15408335 -70030145 + L1MC4a LINE L1 3821 3974 -2172 1831 154 62 22 chr17 15408354 15408678 -70029802 + MER1B DNA MER1_type 1 337 0 383 254 175 87 chr17 15408885 15409515 -70028965 + L1MC4a LINE L1 5269 5418 -733 1981 93 0 0 chr17 15409635 15409883 -70028597 - AluY SINE Alu -21 290 43 442 311 50 31 chr17 15410494 15410655 -70027825 + MIR3 SINE MIR 36 199 -9 2210 100 3 7 chr17 15411055 15411356 -70027124 + AluSx SINE Alu 1 300 -12 2176 115 3 3 chr17 15411551 15411856 -70026624 + AluSx SINE Alu 1 305 -7 3168 239 9 24 chr17 15411862 15412660 -70025820 - L1M4 LINE L1 -1681 4465 3680 401 306 61 5 chr17 15413014 15413078 -70025402 - MER5A DNA MER1_type -1 188 129 2161 70 56 0 chr17 15413078 15413363 -70025117 + AluYa5 SINE Alu 1 301 -10 401 306 61 5 chr17 15413363 15413470 -70025010 - MER5A DNA MER1_type -60 129 6 1896 108 31 83 chr17 15413549 15413874 -70024606 + AluSg SINE Alu 1 308 -2 2405 94 0 0 chr17 15414727 15415025 -70023455 - AluSg SINE Alu -12 298 1 463 121 0 0 chr17 15415477 15415543 -70022937 - L1MA3 LINE L1 -1 6304 6239 1004 113 0 0 chr17 15415543 15415693 -70022787 - L1MA2 LINE L1 -109 6195 6046 2195 206 93 65 chr17 15415696 15415877 -70022603 - Charlie2 DNA MER1_type -72 2790 2616 2147 54 8 0 chr17 15415877 15416162 -70022318 + AluY SINE Alu 22 308 0 2195 206 93 65 chr17 15416162 15416888 -70021592 - Charlie2 DNA MER1_type -246 2616 1856 350 288 204 12 chr17 15416888 15417138 -70021342 - Charlie2 DNA MER1_type -2536 326 29 270 256 51 0 chr17 15417891 15417969 -70020511 - MIR SINE MIR -70 192 111 205 171 0 0 chr17 15417969 15418004 -70020476 + T-rich Low_complexity Low_complexity 3 37 0 38857 46 4 1 chr17 15418140 15418151 -70020329 - L1PA5 LINE L1 -4 6150 6141 486 49 0 0 chr17 15418151 15418212 -70020268 + (TA)n Simple_repeat Simple_repeat 2 62 0 38857 46 4 1 chr17 15418212 15423715 -70014765 - L1PA5 LINE L1 -13 6141 623 693 70 0 0 chr17 15423715 15423801 -70014679 - L1PA5 LINE L1 -6050 96 11 244 313 9 61 chr17 15423807 15423922 -70014558 - MIR3 SINE MIR -90 118 10 185 193 0 35 chr17 15424706 15424763 -70013717 + (TATG)n Simple_repeat Simple_repeat 2 56 0 430 215 65 9 chr17 15425186 15425293 -70013187 + MIR3 SINE MIR 87 199 -9 399 295 11 0 chr17 15425663 15425758 -70012722 + MER5A DNA MER1_type 70 165 -24 832 305 60 42 chr17 15427056 15427538 -70010942 - LTR16C LTR ERVL 0 491 1 4034 182 78 3 chr17 15428181 15428562 -70009918 + MER63C DNA MER1_type 16 367 -693 198 0 0 0 chr17 15428562 15428584 -70009896 + (TG)n Simple_repeat Simple_repeat 1 22 0 4034 182 78 3 chr17 15428584 15429054 -70009426 + MER63C DNA MER1_type 367 930 0 528 223 122 32 chr17 15430289 15430477 -70008003 + MIR SINE MIR 20 224 -38 259 340 21 31 chr17 15430491 15430588 -70007892 - L2 LINE L2 -72 3200 3105 236 277 15 15 chr17 15430670 15430735 -70007745 + MIR SINE MIR 84 148 -114 225 266 16 64 chr17 15431415 15431603 -70006877 + C-rich Low_complexity Low_complexity 1 179 0 1440 193 92 13 chr17 15431610 15431926 -70006554 - MER2 DNA MER2_type -3 342 2 237 33 0 0 chr17 15431985 15432015 -70006465 + (CA)n Simple_repeat Simple_repeat 1 30 0 330 291 0 0 chr17 15432315 15432418 -70006062 - MER103 DNA DNA -63 103 1 653 286 34 50 chr17 15433251 15433513 -70004967 + MIR SINE MIR 5 262 0 326 245 22 86 chr17 15434538 15434606 -70003874 - L2 LINE L2 -367 2947 2890 2085 108 3 11 chr17 15434606 15434924 -70003556 + AluSp SINE Alu 1 316 0 326 245 22 86 chr17 15434924 15434993 -70003487 - L2 LINE L2 -424 2890 2818 435 259 9 9 chr17 15435384 15435492 -70002988 - L2 LINE L2 -5 3267 3160 348 258 114 34 chr17 15436675 15436860 -70001620 + MIR SINE MIR 31 226 -36 1972 73 48 48 chr17 15438459 15438748 -69999732 - AluSg SINE Alu -21 289 1 746 248 112 10 chr17 15438780 15439074 -69999406 - L1ME3A LINE L1 -326 5913 5590 1964 195 50 8 chr17 15439654 15440034 -69998446 - MSTD LTR MaLR 0 396 1 2133 61 13 55 chr17 15440200 15440511 -69997969 + AluY SINE Alu 1 298 -13 934 259 4 4 chr17 15440587 15440826 -69997654 - L1ME3A LINE L1 -2561 3654 3416 * 1278 251 113 34 chr17 15440814 15441146 -69997334 - L1MDa LINE L1 -3518 2697 2331 2384 94 0 0 chr17 15441146 15441454 -69997026 - AluSg1 SINE Alu -1 308 1 1278 251 113 34 chr17 15441454 15441698 -69996782 - L1MDa LINE L1 -3884 2331 2108 1580 188 141 44 chr17 15441743 15442217 -69996263 - Charlie1b DNA MER1_type 0 523 4 1929 266 65 27 chr17 15442217 15442873 -69995607 - L1MDa LINE L1 -4328 2068 1318 267 103 0 0 chr17 15442873 15442912 -69995568 + (TG)n Simple_repeat Simple_repeat 2 40 0 1929 266 65 27 chr17 15442912 15443103 -69995377 - L1MDa LINE L1 -5078 1318 1136 1531 301 117 22 chr17 15443130 15444130 -69994350 - L1MDa LINE L1 -5300 1096 2 1658 152 48 24 chr17 15444661 15444951 -69993529 + AluJb SINE Alu 1 297 -15 2215 74 0 14 chr17 15444953 15445293 -69993187 + AluY SINE Alu 1 336 0 233 238 24 24 chr17 15445902 15445986 -69992494 + L1MC/D LINE L1 5799 5882 -1926 184 291 47 23 chr17 15446255 15446341 -69992139 - MIR SINE MIR -10 252 165 565 209 0 26 chr17 15446536 15446651 -69991829 - MIR SINE MIR -81 181 70 349 274 130 7 chr17 15446653 15446799 -69991681 - L1MEc LINE L1 -6194 202 39 195 42 0 0 chr17 15446799 15446823 -69991657 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1414 120 9 60 chr17 15446826 15447059 -69991421 - AluSx SINE Alu -31 281 61 2797 135 29 5 chr17 15448301 15448717 -69989763 - MSTA LTR MaLR 0 428 3 617 319 72 16 chr17 15449732 15450052 -69988428 + L1ME LINE L1 5333 5670 -451 230 280 121 8 chr17 15450087 15450219 -69988261 - L1ME LINE L1 -205 5916 5770 657 253 39 91 chr17 15451396 15451485 -69986995 - L1ME4a LINE L1 -196 5925 5833 2274 108 7 0 chr17 15451485 15451780 -69986700 - AluSq SINE Alu -16 297 1 657 253 39 91 chr17 15451780 15452074 -69986406 - L1ME4a LINE L1 -288 5833 5562 737 246 18 12 chr17 15453385 15453556 -69984924 - MER5B DNA MER1_type -1 177 6 2995 206 51 19 chr17 15453567 15454289 -69984191 + L1MB8 LINE L1 4458 5202 -944 684 279 91 29 chr17 15454283 15454797 -69983683 + L1PB1 LINE L1 5248 5880 -271 * 3408 196 30 22 chr17 15454362 15455096 -69983384 + L1MB8 LINE L1 5433 6172 -6 205 312 65 13 chr17 15456690 15456767 -69981713 - MIR SINE MIR -162 100 20 498 281 39 6 chr17 15456796 15456974 -69981506 - L1PB4 LINE L1 -12 6144 5961 2457 75 0 0 chr17 15457707 15458002 -69980478 + AluY SINE Alu 1 295 -16 418 286 106 42 chr17 15458431 15458788 -69979692 + L1ME LINE L1 5024 5403 -743 327 276 103 39 chr17 15458841 15458997 -69979483 + L1ME LINE L1 5455 5620 -501 752 129 8 32 chr17 15460065 15460189 -69978291 + L1MA3 LINE L1 6180 6300 -5 1495 172 8 27 chr17 15460210 15460471 -69978009 + AluJo SINE Alu 35 290 -22 25 0 0 0 chr17 15460508 15460533 -69977947 + AT_rich Low_complexity Low_complexity 1 25 0 2618 64 0 0 chr17 15460727 15461038 -69977442 + AluY SINE Alu 1 311 0 647 246 34 6 chr17 15462401 15462580 -69975900 - L1PB4 LINE L1 -12 6144 5961 199 333 45 10 chr17 15462974 15463075 -69975405 - MIR SINE MIR -65 143 53 203 203 25 101 chr17 15463077 15463156 -69975324 - L2 LINE L2 0 3272 3200 1362 274 165 18 chr17 15463167 15463725 -69974755 + L2 LINE L2 2187 2826 -488 577 298 130 14 chr17 15463712 15463997 -69974483 + L2 LINE L2 2991 3308 -5 * 2287 102 10 0 chr17 15465209 15465512 -69972968 + AluSx SINE Alu 1 306 -6 234 163 102 0 chr17 15465700 15465749 -69972731 - L1MB8 LINE L1 -8 6170 6117 664 293 96 43 chr17 15465784 15466224 -69972256 - L1ME4a LINE L1 -280 5841 5379 1220 109 20 30 chr17 15467361 15467562 -69970918 - L1MA5A LINE L1 -4 6293 6095 826 93 0 19 chr17 15467562 15467670 -69970810 - U6 snRNA snRNA 0 107 2 202 134 119 104 chr17 15468254 15468284 -69970196 - L2 LINE L2 -1 3271 3243 2298 127 7 74 chr17 15468284 15468702 -69969778 - MLT1B LTR MaLR 0 390 1 202 134 119 104 chr17 15468702 15468738 -69969742 - L2 LINE L2 -29 3243 3204 412 182 98 53 chr17 15469568 15469700 -69968780 - MER69A DNA AcHobo -32 145 8 619 238 14 24 chr17 15469819 15470019 -69968461 + MER63 DNA MER1_type 1 1678 -10 1022 120 57 31 chr17 15470463 15470655 -69967825 + L1MB3 LINE L1 5986 6182 -1 228 328 0 0 chr17 15470909 15470970 -69967510 - L3b LINE CR1 -242 1341 1281 243 213 0 49 chr17 15471441 15471502 -69966978 + (ATG)n Simple_repeat Simple_repeat 2 59 0 377 295 40 10 chr17 15471561 15471710 -69966770 - MIR SINE MIR -48 160 4 360 0 0 0 chr17 15472886 15472926 -69965554 + (CA)n Simple_repeat Simple_repeat 1 40 0 257 344 28 56 chr17 15474026 15474276 -69964204 - L2 LINE L2 -132 3140 2898 323 245 11 32 chr17 15474488 15474582 -69963898 + MIR3 SINE MIR 112 203 -5 21 36 0 0 chr17 15474697 15474725 -69963755 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 15475943 15475964 -69962516 + AT_rich Low_complexity Low_complexity 1 21 0 233 341 11 0 chr17 15477446 15477534 -69960946 + MER117 DNA MER1_type 1 89 -108 1497 176 0 4 chr17 15477637 15477881 -69960599 + AluJo SINE Alu 32 274 -38 996 252 231 9 chr17 15478790 15479247 -69959233 + MLT1G LTR MaLR 35 587 -3 2881 10 0 3 chr17 15479401 15479714 -69958766 - AluYb8 SINE Alu -6 312 1 309 326 136 16 chr17 15479969 15480153 -69958327 - MIR SINE MIR -55 207 2 21 0 0 0 chr17 15480263 15480284 -69958196 + AT_rich Low_complexity Low_complexity 1 21 0 553 277 130 28 chr17 15480647 15480900 -69957580 + MLT1I LTR MaLR 131 409 0 2293 98 3 13 chr17 15481060 15481367 -69957113 + AluSp SINE Alu 1 304 -9 26 50 0 0 chr17 15482750 15482790 -69955690 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr17 15482825 15482853 -69955627 + AT_rich Low_complexity Low_complexity 1 28 0 449 331 73 59 chr17 15483417 15483758 -69954722 - L2 LINE L2 0 3272 2927 735 140 158 117 chr17 15483794 15483878 -69954602 + MER45A DNA AcHobo 1 80 -1501 2129 131 3 0 chr17 15483878 15484176 -69954304 - AluSx SINE Alu -13 299 1 735 140 158 117 chr17 15484176 15484262 -69954218 + MER45A DNA AcHobo 80 178 0 223 270 81 27 chr17 15484269 15484380 -69954100 - L2 LINE L2 -549 2765 2649 1750 73 162 4 chr17 15484657 15484916 -69953564 + AluYa8 SINE Alu 1 300 0 566 188 10 0 chr17 15485285 15485381 -69953099 + MER3 DNA MER1_type 1 97 -112 200 358 37 9 chr17 15485405 15485514 -69952966 - MIR SINE MIR -78 130 19 202 345 11 23 chr17 15485926 15486013 -69952467 - MIR SINE MIR -148 114 29 2141 151 89 25 chr17 15486470 15486874 -69951606 - MSTB1 LTR MaLR 0 432 3 231 228 88 0 chr17 15487517 15487574 -69950906 + L1M4 LINE L1 4785 4846 -1300 807 172 0 8 chr17 15488302 15488436 -69950044 + FLAM_C SINE Alu 1 133 -10 2289 96 0 3 chr17 15488700 15488992 -69949488 - AluSc SINE Alu -18 291 1 833 271 207 18 chr17 15489383 15489726 -69948754 - MLT1I LTR MaLR -1 408 1 620 244 49 19 chr17 15491318 15491523 -69946957 + L1M4 LINE L1 5111 5321 -825 2436 143 16 0 chr17 15491935 15492314 -69946166 + MLT1B LTR MaLR 6 390 0 1716 161 29 0 chr17 15492385 15492659 -69945821 + AluJo SINE Alu 1 282 -30 507 33 0 0 chr17 15492662 15492723 -69945757 + (TAAAA)n Simple_repeat Simple_repeat 2 62 0 1189 228 71 15 chr17 15493655 15493980 -69944500 + MER2 DNA MER2_type 2 344 0 279 193 117 105 chr17 15494447 15494618 -69943862 - L2 LINE L2 0 3313 3141 4098 243 88 33 chr17 15495241 15495580 -69942900 + L1MEc LINE L1 36 355 -6041 180 0 0 0 chr17 15495580 15495600 -69942880 + (GA)n Simple_repeat Simple_repeat 1 20 0 4098 243 88 33 chr17 15495600 15496347 -69942133 + L1MEc LINE L1 355 1060 -5336 1778 145 0 0 chr17 15496347 15496623 -69941857 + AluSx SINE Alu 29 304 -8 4098 243 88 33 chr17 15496623 15496659 -69941821 + L1MEc LINE L1 1060 1093 -5303 351 0 0 0 chr17 15496659 15496698 -69941782 + (TG)n Simple_repeat Simple_repeat 2 40 0 4098 243 88 33 chr17 15496698 15496955 -69941525 + L1MEc LINE L1 1093 1335 -5061 827 233 23 6 chr17 15496955 15497127 -69941353 + MER45A DNA AcHobo 1 175 -3 4098 243 88 33 chr17 15497127 15497283 -69941197 + L1MEc LINE L1 1335 1658 -4738 233 256 0 39 chr17 15497273 15497351 -69941129 + L1MA10 LINE L1 6258 6332 -2 * 436 262 65 0 chr17 15497522 15497629 -69940851 + LTR16C LTR ERVL 120 233 -258 838 210 0 0 chr17 15497730 15497892 -69940588 + L1MEc LINE L1 650 811 -5585 332 313 6 62 chr17 15497944 15498123 -69940357 + LTR16C LTR ERVL 323 491 0 1052 212 51 10 chr17 15498325 15498636 -69939844 + MER33 DNA MER1_type 1 319 -5 540 258 74 46 chr17 15499518 15499851 -69938629 + MLT1J2 LTR MaLR 70 450 0 540 309 49 45 chr17 15499864 15500087 -69938393 - Charlie8 DNA MER1_type -2190 227 4 551 267 6 72 chr17 15500357 15500596 -69937884 - LTR16A1 LTR ERVL 0 457 251 197 283 0 0 chr17 15500961 15501007 -69937473 + MIR SINE MIR 78 123 -139 1297 194 89 31 chr17 15501021 15501346 -69937134 + MER2 DNA MER2_type 1 344 0 2084 95 0 14 chr17 15501687 15502008 -69936472 + AluSx SINE Alu 1 312 0 3628 55 0 0 chr17 15503122 15503559 -69934921 + L1PA5 LINE L1 5710 6146 -8 28 0 0 0 chr17 15503708 15503736 -69934744 + AT_rich Low_complexity Low_complexity 1 28 0 2214 130 22 33 chr17 15503882 15504250 -69934230 + THE1B LTR MaLR 1 364 0 408 244 32 41 chr17 15504417 15504540 -69933940 + MER5C DNA MER1_type 1 122 -202 294 224 15 0 chr17 15504616 15504683 -69933797 + MER5C DNA MER1_type 256 323 -1 840 240 81 51 chr17 15505037 15505525 -69932955 - MLT1H LTR MaLR 0 549 15 200 244 0 0 chr17 15505564 15505605 -69932875 + L2 LINE L2 3269 3309 -4 1906 211 55 45 chr17 15506395 15506926 -69931554 - LTR55 LTR ERV -10 538 3 254 290 21 11 chr17 15507360 15507453 -69931027 - MER103 DNA DNA 0 166 73 205 225 12 12 chr17 15507646 15507726 -69930754 + GA-rich Low_complexity Low_complexity 3 82 0 322 285 87 14 chr17 15508460 15508639 -69929841 + MIR SINE MIR 12 249 -13 491 278 24 47 chr17 15508662 15508917 -69929563 - L1ME4a LINE L1 -256 5865 5617 526 190 18 18 chr17 15510044 15510207 -69928273 + CT-rich Low_complexity Low_complexity 1 163 0 341 321 23 38 chr17 15510508 15510639 -69927841 + MIR SINE MIR 16 144 -64 916 252 28 24 chr17 15511111 15511361 -69927119 + MIR SINE MIR 11 261 -1 354 123 0 0 chr17 15512218 15512275 -69926205 + (CA)n Simple_repeat Simple_repeat 1 57 0 264 285 42 56 chr17 15512405 15512549 -69925931 + MER5B DNA MER1_type 11 152 -26 319 148 33 16 chr17 15514423 15514484 -69923996 + L1ME3A LINE L1 6104 6165 -5 192 215 76 63 chr17 15514519 15514598 -69923882 + MIR SINE MIR 178 257 -5 398 81 32 0 chr17 15514745 15514807 -69923673 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 611 295 84 9 chr17 15514906 15515133 -69923347 - MIR SINE MIR -17 245 2 196 171 57 0 chr17 15515163 15515198 -69923282 + L2 LINE L2 3218 3254 -18 210 143 0 0 chr17 15515411 15515446 -69923034 + (TG)n Simple_repeat Simple_repeat 1 35 0 211 211 19 0 chr17 15516323 15516375 -69922105 + CT-rich Low_complexity Low_complexity 1 53 0 2014 81 39 36 chr17 15519047 15519356 -69919124 - AluSg SINE Alu 0 310 1 204 214 24 0 chr17 15519750 15519792 -69918688 + CT-rich Low_complexity Low_complexity 4 46 0 1781 84 8 0 chr17 15522412 15522650 -69915830 - AluSq SINE Alu -68 245 6 842 293 20 33 chr17 15523357 15523661 -69914819 - MLT1J LTR MaLR -7 504 205 698 347 113 21 chr17 15523997 15524054 -69914426 + L2 LINE L2 2151 2201 -1113 2204 80 0 3 chr17 15524054 15524340 -69914140 - AluSp SINE Alu -28 285 1 698 347 113 21 chr17 15524340 15524934 -69913546 + L2 LINE L2 2201 2862 -452 525 304 293 0 chr17 15525011 15525370 -69913110 - L2 LINE L2 -2 3311 2848 333 269 92 15 chr17 15525566 15525696 -69912784 + L1ME4a LINE L1 5981 6120 -1 375 23 0 0 chr17 15526581 15526625 -69911855 + (CAG)n Simple_repeat Simple_repeat 1 44 0 341 272 139 51 chr17 15527381 15527539 -69910941 - L3 LINE CR1 -24 1553 1382 998 266 95 105 chr17 15527542 15528774 -69909706 - L2 LINE L2 0 3313 2035 2393 48 0 10 chr17 15528798 15529093 -69909387 + AluY SINE Alu 1 292 -19 180 0 0 0 chr17 15530157 15530177 -69908303 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 2373 60 7 0 chr17 15531627 15531928 -69906552 - AluY SINE Alu -8 303 1 2250 94 3 0 chr17 15531928 15532226 -69906254 - AluSc SINE Alu -10 299 1 803 210 39 100 chr17 15532595 15532824 -69905656 + MER58A DNA MER1_type 1 215 -9 2271 41 6 47 chr17 15532970 15533290 -69905190 - AluY SINE Alu -4 307 1 279 197 54 35 chr17 15534339 15534455 -69904025 - L1MC/D LINE L1 -287 5834 5768 270 186 17 0 chr17 15534577 15534636 -69903844 + MADE1 DNA Mariner 21 80 0 26 0 0 0 chr17 15534670 15534696 -69903784 + AT_rich Low_complexity Low_complexity 1 26 0 314 274 27 45 chr17 15534740 15534936 -69903544 - L1MC/D LINE L1 -668 5494 5293 369 344 119 9 chr17 15534943 15535170 -69903310 - L1MC/D LINE L1 -1154 4992 4741 255 191 17 69 chr17 15535202 15535375 -69903105 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 305 302 0 0 chr17 15535619 15535725 -69902755 - L1MC/D LINE L1 -1537 4609 4504 253 291 114 34 chr17 15535777 15536489 -69901991 - L1MC/D LINE L1 -2935 3211 2443 341 309 92 28 chr17 15536596 15536740 -69901740 - L1MC/D LINE L1 -3784 2362 2198 1771 125 7 7 chr17 15536740 15537012 -69901468 - AluSx SINE Alu -6 306 35 341 309 92 28 chr17 15537012 15537084 -69901396 - L1MC/D LINE L1 -3948 2198 2132 242 337 0 35 chr17 15537135 15537221 -69901259 + L2 LINE L2 3226 3308 -5 278 237 17 0 chr17 15537949 15538008 -69900472 + L3 LINE CR1 1504 1563 -14 189 0 0 0 chr17 15538589 15538610 -69899870 + (A)n Simple_repeat Simple_repeat 1 21 0 315 255 0 71 chr17 15539034 15539132 -69899348 - L1MC4 LINE L1 -1339 6703 6613 198 191 0 0 chr17 15539150 15539197 -69899283 + (TA)n Simple_repeat Simple_repeat 1 47 0 443 172 35 0 chr17 15541142 15541229 -69897251 + U13 snRNA snRNA 13 102 -2 234 251 43 12 chr17 15541247 15541342 -69897138 - MIR3 SINE MIR -46 162 61 459 240 129 88 chr17 15542888 15542956 -69895524 - MER5B DNA MER1_type 0 178 114 2214 101 6 28 chr17 15542956 15543273 -69895207 + AluSx SINE Alu 1 310 -2 459 240 129 88 chr17 15543273 15543375 -69895105 - MER5B DNA MER1_type -64 114 1 212 245 21 75 chr17 15543618 15543712 -69894768 + L2 LINE L2 3225 3313 0 1669 174 3 29 chr17 15543896 15544206 -69894274 + AluJo SINE Alu 1 302 -10 394 330 112 28 chr17 15544759 15545080 -69893400 + L2 LINE L2 2415 2762 -552 229 316 42 42 chr17 15545301 15545396 -69893084 + L2 LINE L2 3169 3263 -9 184 29 29 29 chr17 15548415 15548449 -69890031 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 203 262 0 0 chr17 15549481 15549523 -69888957 - MIR3 SINE MIR -24 184 143 454 288 78 33 chr17 15549973 15550216 -69888264 + MIR SINE MIR 5 258 -4 180 274 55 27 chr17 15550357 15550430 -69888050 + MER5B DNA MER1_type 104 178 0 439 243 135 0 chr17 15550438 15550599 -69887881 - MER5A DNA MER1_type 0 189 4 569 275 46 85 chr17 15551120 15551509 -69886971 - L1MC4a LINE L1 -1883 5925 5552 6504 212 35 51 chr17 15551702 15554450 -69884030 + L1MB7 LINE L1 3292 6101 -83 8748 99 14 5 chr17 15554454 15555655 -69882825 + L1P3 LINE L1 5 1216 -5245 7306 52 17 16 chr17 15555655 15557286 -69881194 + L1PA7 LINE L1 4521 6154 0 541 133 0 0 chr17 15557287 15557377 -69881103 + L1MB8 LINE L1 6089 6178 0 2676 45 0 3 chr17 15557458 15557767 -69880713 + AluY SINE Alu 1 308 -3 21 0 0 0 chr17 15557797 15557818 -69880662 + AT_rich Low_complexity Low_complexity 1 21 0 2167 113 0 13 chr17 15558836 15559137 -69879343 - AluSx SINE Alu -15 297 1 576 326 97 59 chr17 15559453 15559680 -69878800 - L1M4 LINE L1 -2213 3933 3716 2432 65 0 10 chr17 15559680 15559989 -69878491 - AluY SINE Alu -5 306 1 576 326 97 59 chr17 15559989 15560579 -69877901 - L1M4 LINE L1 -2430 3716 3085 305 278 52 63 chr17 15560576 15560828 -69877652 - L1M4 LINE L1 -3623 2523 2275 * 2135 105 3 3 chr17 15560828 15561122 -69877358 - AluSc SINE Alu -11 298 5 1626 206 0 31 chr17 15561381 15561702 -69876778 + AluJo SINE Alu 1 311 -1 1990 143 36 15 chr17 15561739 15562074 -69876406 - MER39 LTR ERV1 -5 702 361 497 246 103 10 chr17 15562042 15562212 -69876268 - MER39 LTR ERV1 -355 187 1 * 271 318 112 16 chr17 15562374 15562616 -69875864 - HAL1 LINE L1 -789 1718 1454 828 153 0 0 chr17 15562692 15562810 -69875670 + FLAM_C SINE Alu 1 118 -15 761 265 38 74 chr17 15563046 15563099 -69875381 + L1ME4a LINE L1 5546 5599 -522 2279 81 11 0 chr17 15563099 15563382 -69875098 + AluSx SINE Alu 12 297 -15 761 265 38 74 chr17 15563382 15563720 -69874760 + L1ME4a LINE L1 5599 5923 -198 414 0 0 0 chr17 15564093 15564139 -69874341 + (TG)n Simple_repeat Simple_repeat 2 47 0 507 33 0 0 chr17 15564437 15564498 -69873982 + (TC)n Simple_repeat Simple_repeat 2 62 0 2344 94 7 0 chr17 15565879 15566178 -69872302 + AluSg SINE Alu 3 303 -7 239 202 326 0 chr17 15566303 15566392 -69872088 + MIR SINE MIR 145 262 0 2477 74 3 0 chr17 15566703 15567012 -69871468 + AluSp SINE Alu 1 310 -3 299 109 47 62 chr17 15567461 15567525 -69870955 + LTR29 LTR ERV1 137 199 -423 * 1516 231 114 33 chr17 15567511 15568030 -69870450 + LTR48B LTR ERV1 84 644 0 22 35 0 0 chr17 15568030 15568059 -69870421 + AT_rich Low_complexity Low_complexity 1 29 0 569 200 44 37 chr17 15569938 15570073 -69868407 + MER3 DNA MER1_type 35 123 -86 2175 198 69 27 chr17 15570137 15571090 -69867390 - L1ME1 LINE L1 -324 5842 4842 757 41 31 0 chr17 15571092 15571189 -69867291 - L1P4 LINE L1 -677 5484 5385 1900 250 26 30 chr17 15571194 15571459 -69867021 - L1ME1 LINE L1 -1312 4834 4570 2391 78 0 0 chr17 15571459 15571752 -69866728 + AluY SINE Alu 1 293 -18 1900 250 26 30 chr17 15571752 15572062 -69866418 - L1ME1 LINE L1 -1576 4570 4261 7162 114 8 1 chr17 15572063 15575123 -69863357 - L1PA10 LINE L1 0 6483 3340 6790 51 1 0 chr17 15575298 15576081 -69862399 + L1PA6 LINE L1 5371 6154 0 11085 207 22 39 chr17 15577417 15580819 -69857661 - L1PA10 LINE L1 -3103 3358 10 1968 242 17 13 chr17 15580834 15581363 -69857117 - L1ME1 LINE L1 -1880 4266 3736 260 244 13 51 chr17 15581371 15581449 -69857031 - MLT2C1 LTR ERVL -54 343 269 664 146 15 44 chr17 15581580 15581717 -69856763 - MLT1E3 LTR MaLR -420 204 72 323 121 24 24 chr17 15581858 15581941 -69856539 + GA-rich Low_complexity Low_complexity 1 83 0 2444 148 43 45 chr17 15581992 15582438 -69856042 - MER65A LTR ERV1 0 445 1 189 246 29 58 chr17 15582538 15582607 -69855873 + MIR3 SINE MIR 131 197 -11 891 305 95 49 chr17 15582758 15583012 -69855468 + L2 LINE L2 2779 3020 -293 2142 135 0 0 chr17 15583012 15583309 -69855171 - AluSq SINE Alu -16 297 1 891 305 95 49 chr17 15583309 15583563 -69854917 + L2 LINE L2 3020 3312 -1 228 67 0 0 chr17 15584949 15584979 -69853501 + (CA)n Simple_repeat Simple_repeat 2 31 0 189 225 0 0 chr17 15585009 15585049 -69853431 - L2 LINE L2 0 3313 3274 2680 215 28 12 chr17 15585708 15585782 -69852698 + L1M4 LINE L1 2562 2633 -3513 2034 115 31 0 chr17 15585782 15586069 -69852411 + AluSx SINE Alu 2 297 -15 2680 215 28 12 chr17 15586069 15586681 -69851799 + L1M4 LINE L1 2633 3259 -2887 376 216 0 78 chr17 15587038 15587140 -69851340 + MIR SINE MIR 154 247 -15 247 152 152 30 chr17 15587346 15587412 -69851068 - MER57A LTR ERV1 0 403 330 1542 129 57 6 chr17 15587439 15587749 -69850731 - LTR54 LTR ERV1 -134 376 1 310 305 23 0 chr17 15588246 15588349 -69850131 - MIR SINE MIR -48 160 55 241 293 101 10 chr17 15588596 15588695 -69849785 + MIR SINE MIR 5 112 -150 501 280 45 25 chr17 15588712 15588869 -69849611 - MIR SINE MIR -66 196 37 201 74 0 0 chr17 15588986 15589013 -69849467 + (CA)n Simple_repeat Simple_repeat 1 27 0 1856 179 23 20 chr17 15589014 15589361 -69849119 - MLT2C1 LTR ERVL -49 348 1 337 343 9 0 chr17 15589375 15589480 -69849000 + L2 LINE L2 3197 3302 -11 21 0 0 0 chr17 15590408 15590429 -69848051 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 15590569 15590615 -69847865 + (CA)n Simple_repeat Simple_repeat 2 47 0 254 297 0 0 chr17 15590615 15590679 -69847801 + L2 LINE L2 2862 2925 -347 2572 47 7 0 chr17 15590766 15591065 -69847415 + AluY SINE Alu 1 301 -10 2332 86 13 0 chr17 15591071 15591374 -69847106 + AluSx SINE Alu 1 307 -5 2064 106 20 3 chr17 15591374 15591666 -69846814 + AluSx SINE Alu 1 297 -15 1118 125 6 0 chr17 15591758 15591918 -69846562 - AluSx SINE Alu -151 161 1 383 338 18 5 chr17 15592035 15592257 -69846223 - L1M4 LINE L1 -1098 5048 4824 268 290 117 6 chr17 15592372 15592534 -69845946 - L1M4 LINE L1 -1005 5141 4962 580 295 41 37 chr17 15592636 15592931 -69845549 + MLT1I LTR MaLR 91 386 -23 290 316 11 0 chr17 15592986 15593160 -69845320 - L1M4 LINE L1 -1231 4915 4740 2121 101 3 3 chr17 15593160 15593456 -69845024 - AluY SINE Alu -15 296 1 538 280 66 18 chr17 15593466 15594002 -69844478 - L1M4 LINE L1 -1497 4649 4027 712 329 63 4 chr17 15594026 15594281 -69844199 + L1MEc LINE L1 36 305 -6091 947 316 82 14 chr17 15594288 15594702 -69843778 + L3 LINE CR1 1130 1571 -6 2147 83 28 0 chr17 15594760 15595050 -69843430 - AluY SINE Alu -13 298 1 243 0 0 0 chr17 15595170 15595197 -69843283 + (TG)n Simple_repeat Simple_repeat 2 28 0 864 189 6 6 chr17 15595200 15595369 -69843111 - AluJo SINE Alu -23 289 121 1630 156 84 39 chr17 15595495 15595854 -69842626 - THE1C LTR MaLR 0 375 1 365 217 33 158 chr17 15595904 15596088 -69842392 - MER117 DNA MER1_type -34 163 3 2118 110 0 13 chr17 15596486 15596794 -69841686 - AluSc SINE Alu -5 304 1 337 392 38 0 chr17 15596827 15597036 -69841444 + MIR SINE MIR 5 221 -41 773 298 57 20 chr17 15597045 15597290 -69841190 - MIR SINE MIR 0 262 9 217 254 0 36 chr17 15597337 15597392 -69841088 - L2 LINE L2 -19 3253 3201 2254 145 13 16 chr17 15597947 15598333 -69840147 + MLT1B LTR MaLR 3 387 -3 2331 137 65 2 chr17 15598478 15598881 -69839599 - MSTA LTR MaLR 0 428 1 298 277 104 73 chr17 15599286 15599575 -69838905 - LTR16A1 LTR ERVL 0 457 160 247 111 0 0 chr17 15600412 15600448 -69838032 + MLT1B LTR MaLR 333 368 -22 328 318 3 23 chr17 15601645 15601763 -69836717 - MIR3 SINE MIR -20 188 71 806 201 19 6 chr17 15602541 15602700 -69835780 + MER5A DNA MER1_type 1 161 -28 2217 100 10 0 chr17 15603602 15603902 -69834578 - AluSg SINE Alu -7 303 1 1534 120 31 0 chr17 15604142 15604401 -69834079 - L1P4 LINE L1 -619 5547 5281 410 326 73 54 chr17 15604513 15604591 -69833889 - L2 LINE L2 -15 3257 3182 490 229 69 51 chr17 15604591 15604766 -69833714 + MER104 DNA MER2_type 1 178 -2 410 326 73 54 chr17 15604766 15604948 -69833532 - L2 LINE L2 -90 3182 2992 844 191 0 0 chr17 15604962 15605098 -69833382 - FRAM SINE Alu -40 136 1 248 226 96 9 chr17 15605598 15605713 -69832767 - Charlie7 DNA MER1_type -48 2564 2440 515 262 47 0 chr17 15606645 15606794 -69831686 - MIR SINE MIR -2 260 105 2458 46 0 3 chr17 15606820 15607122 -69831358 - AluY SINE Alu -10 301 1 1595 89 9 0 chr17 15607826 15608040 -69830440 - LTR12 LTR ERV1 -19 695 480 317 245 31 20 chr17 15608041 15608139 -69830341 - LTR30 LTR ERV1 -80 642 544 4526 155 72 32 chr17 15608145 15609166 -69829314 - pTR5 LTR ERV1 -419 2019 741 358 294 28 9 chr17 15609198 15609307 -69829173 - MIR SINE MIR -150 112 2 1333 168 111 8 chr17 15609848 15610110 -69828370 + AluJb SINE Alu 5 293 -19 1570 143 17 34 chr17 15611265 15611559 -69826921 - AluJo SINE Alu -23 289 1 599 87 47 8 chr17 15611847 15611974 -69826506 + GA-rich Low_complexity Low_complexity 1 132 0 210 240 20 0 chr17 15613133 15613183 -69825297 + L3 LINE CR1 900 950 -627 2142 98 7 3 chr17 15613389 15613686 -69824794 + AluSg SINE Alu 1 298 -12 275 242 106 83 chr17 15613943 15614075 -69824405 + MIR SINE MIR 9 143 -119 2160 106 7 10 chr17 15614288 15614591 -69823889 + AluSg SINE Alu 1 302 -8 214 286 200 0 chr17 15614984 15615089 -69823391 - MIR SINE MIR -122 140 15 825 246 56 20 chr17 15615812 15616064 -69822416 + MIR SINE MIR 2 262 0 1078 267 101 33 chr17 15616240 15616637 -69821843 + MLT1J2 LTR MaLR 1 424 -26 24 0 0 0 chr17 15616663 15616687 -69821793 + AT_rich Low_complexity Low_complexity 1 24 0 234 192 0 0 chr17 15616738 15616790 -69821690 + (TA)n Simple_repeat Simple_repeat 1 52 0 261 75 0 0 chr17 15617051 15617091 -69821389 + (T)n Simple_repeat Simple_repeat 1 40 0 414 355 53 12 chr17 15617122 15617291 -69821189 + MIR3 SINE MIR 32 207 -1 1713 191 97 0 chr17 15618633 15618973 -69819507 - MER93b LTR ERV1 0 373 1 985 192 27 49 chr17 15619700 15619924 -69818556 - MER20 DNA MER1_type 0 219 1 2203 60 46 0 chr17 15620298 15620582 -69817898 - AluY SINE Alu 0 311 15 380 226 129 0 chr17 15620705 15620798 -69817682 - MLT1A1 LTR MaLR 0 374 270 506 169 17 59 chr17 15621233 15621351 -69817129 - MLT1A1 LTR MaLR -188 177 65 459 52 0 0 chr17 15622384 15622442 -69816038 + (ATG)n Simple_repeat Simple_repeat 1 58 0 301 281 24 0 chr17 15622512 15622594 -69815886 - MIR SINE MIR -107 155 72 1402 167 112 65 chr17 15622720 15623103 -69815377 + MER57A LTR ERV1 1 401 -2 204 349 104 9 chr17 15623467 15623573 -69814907 - MIR SINE MIR -62 146 31 2337 82 0 0 chr17 15624552 15624857 -69813623 + AluSc SINE Alu 1 305 -4 264 370 110 32 chr17 15624926 15625080 -69813400 - MIR3 SINE MIR -21 187 22 673 190 0 8 chr17 15625263 15625384 -69813096 + FLAM_C SINE Alu 2 121 -22 1497 108 0 13 chr17 15625433 15625665 -69812815 + AluY SINE Alu 83 311 0 332 244 8 107 chr17 15626646 15626777 -69811703 - L1ME4a LINE L1 -1 6120 6003 854 306 66 39 chr17 15626790 15627346 -69811134 - L2 LINE L2 -13 3300 2734 3037 129 179 78 chr17 15627356 15627731 -69810749 + MER44D DNA MER2_type 1 346 -2141 2077 102 3 3 chr17 15627731 15628024 -69810456 + AluSc SINE Alu 17 309 0 3037 129 179 78 chr17 15628024 15628313 -69810167 + MER44D DNA MER2_type 346 604 -1 1382 226 129 0 chr17 15628313 15628662 -69809818 - L1MB7 LINE L1 -17 6167 5774 575 226 102 0 chr17 15628666 15628843 -69809637 - L2 LINE L2 -563 2751 2557 404 227 93 0 chr17 15628840 15628937 -69809543 + L2 LINE L2 2113 2218 -1096 * 893 107 0 0 chr17 15628991 15629112 -69809368 + AluSq/x SINE Alu 5 125 -188 374 159 77 104 chr17 15629194 15629542 -69808938 - MER34 LTR ERV1 -24 739 323 * 562 247 51 9 chr17 15629541 15629761 -69808719 - LTR48 LTR ERV1 -411 131 1 1875 276 114 22 chr17 15629762 15630661 -69807819 + L2 LINE L2 2331 3313 0 379 260 31 97 chr17 15630892 15631088 -69807392 + MLT1K LTR MaLR 257 439 -149 2124 181 61 11 chr17 15631121 15631563 -69806917 - MLT1C LTR MaLR 0 467 4 324 236 0 56 chr17 15631760 15631849 -69806631 - L1MC4 LINE L1 -1339 6703 6620 320 350 10 0 chr17 15632217 15632317 -69806163 - L2 LINE L2 -27 3286 3186 231 224 17 17 chr17 15633250 15633308 -69805172 + MIR SINE MIR 119 176 -86 527 266 32 83 chr17 15633559 15633619 -69804861 + MIR SINE MIR 50 111 -151 2006 96 7 0 chr17 15633619 15633940 -69804540 - AluSx SINE Alu 0 323 1 527 266 32 83 chr17 15633940 15634096 -69804384 + MIR SINE MIR 111 256 -6 257 311 29 19 chr17 15634570 15634673 -69803807 - MIR SINE MIR -96 166 63 1536 199 32 67 chr17 15635922 15636036 -69802444 - LTR52 LTR ERVL -3 418 302 1559 91 30 35 chr17 15636036 15636267 -69802213 - MER30 DNA MER1_type 0 230 1 1536 199 32 67 chr17 15636267 15636373 -69802107 - LTR52 LTR ERVL -119 302 194 1015 106 0 0 chr17 15636373 15636505 -69801975 - FLAM_C SINE Alu -1 132 1 1536 199 32 67 chr17 15636505 15636516 -69801964 - LTR52 LTR ERVL -227 194 184 2721 13 0 0 chr17 15636516 15636822 -69801658 - AluYb8 SINE Alu -12 306 1 1536 199 32 67 chr17 15636822 15636981 -69801499 - LTR52 LTR ERVL -237 184 40 1391 203 34 14 chr17 15636981 15637108 -69801372 + AluJo SINE Alu 1 124 -188 245 29 29 0 chr17 15637108 15637142 -69801338 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1391 203 34 14 chr17 15637142 15637309 -69801171 + AluJo SINE Alu 124 301 -11 1536 199 32 67 chr17 15637309 15637348 -69801132 - LTR52 LTR ERVL -381 40 1 4168 159 55 37 chr17 15637429 15638236 -69800244 - L1MA7 LINE L1 -157 6134 5314 719 145 26 13 chr17 15638236 15638380 -69800100 + L1MA7 LINE L1 6136 6289 -2 217 367 10 10 chr17 15638449 15638547 -69799933 + MER5B DNA MER1_type 51 148 -30 2194 69 0 21 chr17 15639452 15639803 -69798677 - AluY SINE Alu 0 345 1 1505 161 37 22 chr17 15639899 15640223 -69798257 - L1MB8 LINE L1 0 6178 5850 1077 225 7 44 chr17 15640434 15640705 -69797775 + MIR SINE MIR 2 262 0 2095 103 13 0 chr17 15641110 15641410 -69797070 - AluY SINE Alu -7 304 1 4195 185 72 15 chr17 15641538 15642354 -69796126 - MER21B LTR ERV1 0 863 1 409 244 36 54 chr17 15642530 15642698 -69795782 - L1MC5 LINE L1 -26 7935 7771 469 229 103 16 chr17 15642711 15642902 -69795578 - L1MC4a LINE L1 -379 5799 5693 2130 96 3 0 chr17 15642924 15643217 -69795263 - AluY SINE Alu -17 294 1 248 387 57 8 chr17 15643374 15643498 -69794982 - L2 LINE L2 -2 3270 3141 301 206 63 0 chr17 15643539 15643602 -69794878 - MLT1J LTR MaLR 0 511 445 1110 242 130 54 chr17 15643607 15644145 -69794335 + L1MC5 LINE L1 6959 7537 -424 514 254 26 69 chr17 15644716 15644905 -69793575 + MIR SINE MIR 48 228 -34 693 171 34 0 chr17 15646696 15646813 -69791667 + MER5A DNA MER1_type 48 168 -21 317 288 53 30 chr17 15646698 15646830 -69791650 - MER5A DNA MER1_type -39 150 16 * 248 137 20 0 chr17 15646923 15646974 -69791506 + (TG)n Simple_repeat Simple_repeat 2 53 0 339 232 60 108 chr17 15647500 15647685 -69790795 - MER5B DNA MER1_type -1 177 2 1366 122 18 140 chr17 15647948 15648277 -69790203 + AluJo SINE Alu 17 305 -7 283 213 98 0 chr17 15648588 15648649 -69789831 + MIR SINE MIR 16 82 -180 213 213 0 0 chr17 15648725 15648772 -69789708 + C-rich Low_complexity Low_complexity 2 48 0 305 209 25 0 chr17 15649103 15649266 -69789214 + (TG)n Simple_repeat Simple_repeat 2 168 0 596 152 25 8 chr17 15649337 15649868 -69788612 + (TG)n Simple_repeat Simple_repeat 1 540 0 392 273 66 8 chr17 15650627 15650748 -69787732 - MIR SINE MIR -132 130 3 827 207 30 114 chr17 15651862 15652229 -69786251 - L1ME3A LINE L1 -50 6120 5785 2417 59 3 0 chr17 15652349 15652653 -69785827 - AluY SINE Alu -6 305 1 755 224 24 30 chr17 15653122 15653287 -69785193 + MER5A DNA MER1_type 3 166 -23 249 234 31 16 chr17 15653363 15653427 -69785053 + L2 LINE L2 3017 3081 -191 187 253 80 27 chr17 15653470 15653545 -69784935 + L2 LINE L2 3159 3237 -35 * 655 289 76 32 chr17 15653544 15654186 -69784294 - L2 LINE L2 -51 3262 2589 514 289 34 7 chr17 15654212 15654361 -69784119 + MIR SINE MIR 56 208 -54 526 282 163 37 chr17 15654457 15654911 -69783569 - L2 LINE L2 -783 2531 2021 2460 64 0 6 chr17 15655055 15655368 -69783112 + AluY SINE Alu 1 311 0 743 224 21 36 chr17 15655817 15656009 -69782471 - MER5A DNA MER1_type 0 189 1 197 188 42 21 chr17 15657681 15657729 -69780751 - MIR SINE MIR -115 147 99 306 0 0 0 chr17 15658203 15658237 -69780243 + (TG)n Simple_repeat Simple_repeat 2 35 0 2130 257 40 29 chr17 15658800 15659379 -69779101 - MLT1E LTR MaLR -2 591 7 407 301 72 25 chr17 15659895 15660079 -69778401 - MIR SINE MIR -56 206 8 213 333 0 0 chr17 15660283 15660346 -69778134 + (TG)n Simple_repeat Simple_repeat 1 63 0 382 285 68 68 chr17 15660836 15661057 -69777423 - MIR SINE MIR -19 243 23 312 91 0 0 chr17 15661906 15661950 -69776530 + (GA)n Simple_repeat Simple_repeat 1 44 0 441 202 42 99 chr17 15662478 15662640 -69775840 - MIR SINE MIR -63 145 34 1347 297 137 30 chr17 15662863 15663412 -69775068 - L2 LINE L2 -61 3252 2763 2799 85 6 3 chr17 15663412 15663775 -69774705 - THE1B LTR MaLR 0 364 1 1347 297 137 30 chr17 15663775 15664614 -69773866 - L2 LINE L2 -550 2763 1707 3248 176 15 3 chr17 15664625 15665233 -69773247 + L1PB4 LINE L1 5538 6152 -4 813 256 20 32 chr17 15665361 15665607 -69772873 + MIR SINE MIR 20 262 0 308 350 17 17 chr17 15665611 15665731 -69772749 - L2 LINE L2 -2100 1214 1095 583 335 70 17 chr17 15665740 15666143 -69772337 - L2 LINE L2 -2447 867 444 199 236 36 36 chr17 15667513 15667568 -69770912 + L2 LINE L2 3136 3190 -82 365 274 82 20 chr17 15669296 15669442 -69769038 - MER103 DNA DNA -2 164 10 288 0 0 0 chr17 15670054 15670086 -69768394 + (TC)n Simple_repeat Simple_repeat 2 33 0 1011 113 7 0 chr17 15670087 15670228 -69768252 - AluSq/x SINE Alu -168 144 3 22 0 0 0 chr17 15670250 15670272 -69768208 + AT_rich Low_complexity Low_complexity 1 22 0 574 267 41 6 chr17 15670303 15670475 -69768005 + MER5B DNA MER1_type 1 178 0 1757 156 16 25 chr17 15671218 15671533 -69766947 + AluJo SINE Alu 1 312 0 211 281 35 0 chr17 15671573 15671630 -69766850 - MIR SINE MIR -116 146 88 2200 116 3 0 chr17 15672361 15672672 -69765808 - AluSx SINE Alu 0 312 1 225 265 265 15 chr17 15672672 15672804 -69765676 + L3 LINE CR1 1374 1538 -39 827 259 5 5 chr17 15673342 15673531 -69764949 + MER5A DNA MER1_type 1 189 0 368 180 0 0 chr17 15673542 15673603 -69764877 + MER5A DNA MER1_type 4 64 -125 526 146 67 0 chr17 15673867 15673956 -69764524 + MER5A DNA MER1_type 94 188 -1 3740 32 2 2 chr17 15674704 15675144 -69763336 - L1PA5 LINE L1 -8 6146 5707 313 234 315 0 chr17 15675877 15675988 -69762492 + MIR SINE MIR 46 191 -71 629 292 50 5 chr17 15676018 15676237 -69762243 - MIR SINE MIR -33 229 1 197 303 219 0 chr17 15676237 15676349 -69762131 - MIR SINE MIR -47 215 78 1641 209 171 48 chr17 15677306 15677995 -69760485 - LTR50 LTR ERVL -7 788 15 2043 122 3 3 chr17 15679026 15679330 -69759150 - AluSx SINE Alu -7 305 2 2144 90 10 16 chr17 15680586 15680896 -69757584 + AluSq SINE Alu 1 308 -5 189 0 0 0 chr17 15681106 15681127 -69757353 + (T)n Simple_repeat Simple_repeat 1 21 0 288 327 45 0 chr17 15682729 15682839 -69755641 + L2 LINE L2 3197 3311 -2 275 167 26 64 chr17 15684119 15684197 -69754283 + CT-rich Low_complexity Low_complexity 3 77 0 23 54 0 0 chr17 15684217 15684254 -69754226 + AT_rich Low_complexity Low_complexity 1 37 0 662 202 6 0 chr17 15685232 15685410 -69753070 + (CCA)n Simple_repeat Simple_repeat 2 180 0 261 185 0 0 chr17 15685397 15685462 -69753018 + (CACCAT)n Simple_repeat Simple_repeat 4 68 0 * 2186 81 0 66 chr17 15685497 15685831 -69752649 + AluSx SINE Alu 1 312 0 1328 207 90 16 chr17 15686142 15686509 -69751971 + Charlie4a DNA MER1_type 21 414 -94 349 237 113 73 chr17 15686628 15686928 -69751552 - L1ME4a LINE L1 -104 6017 5697 261 248 40 120 chr17 15687259 15687384 -69751096 - MER91C DNA MER1_type 0 140 26 245 319 59 7 chr17 15687439 15687574 -69750906 - L1MC4a LINE L1 -1879 5929 5788 1870 155 3 3 chr17 15687670 15687960 -69750520 - MLT1A1 LTR MaLR -75 290 1 400 319 9 9 chr17 15688468 15688584 -69749896 - MER91B DNA MER1_type -74 116 1 195 374 30 30 chr17 15688584 15688643 -69749837 - L2 LINE L2 -233 3039 2978 321 47 0 0 chr17 15688643 15688686 -69749794 + (TG)n Simple_repeat Simple_repeat 2 44 0 195 374 30 30 chr17 15688686 15688744 -69749736 - L2 LINE L2 -293 2979 2922 2445 56 3 0 chr17 15688751 15689054 -69749426 - AluY SINE Alu -7 304 1 1294 222 52 48 chr17 15689058 15689576 -69748904 + MLT1F1 LTR MaLR 1 593 0 463 323 24 12 chr17 15689642 15689809 -69748671 - MER5A DNA MER1_type -13 176 8 349 331 19 19 chr17 15690128 15690285 -69748195 + MARNA DNA Mariner 40 196 -390 257 108 96 18 chr17 15690418 15690584 -69747896 + (TA)n Simple_repeat Simple_repeat 1 179 0 256 97 97 10 chr17 15690626 15690729 -69747751 + (TA)n Simple_repeat Simple_repeat 1 112 0 260 172 78 26 chr17 15690732 15690848 -69747632 + (CATA)n Simple_repeat Simple_repeat 4 125 0 308 257 30 50 chr17 15690848 15690949 -69747531 - L1MC4 LINE L1 -1339 6703 6605 274 166 89 32 chr17 15690950 15691107 -69747373 + (TA)n Simple_repeat Simple_repeat 2 167 0 414 190 0 0 chr17 15691127 15691206 -69747274 + AluJ/FRAM SINE Alu 219 297 -15 212 208 21 21 chr17 15691430 15691478 -69747002 + L2 LINE L2 3223 3270 -2 193 56 28 28 chr17 15691527 15691563 -69746917 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr17 15691632 15691653 -69746827 + AT_rich Low_complexity Low_complexity 1 21 0 2013 113 0 7 chr17 15691938 15692289 -69746191 + AluSg SINE Alu 1 310 0 221 205 0 0 chr17 15692603 15692642 -69745838 + MIR SINE MIR 32 70 -138 500 319 24 43 chr17 15692730 15692833 -69745647 - MIR SINE MIR -2 260 162 2473 129 95 5 chr17 15692833 15693276 -69745204 - L1MA9 LINE L1 0 6312 5830 500 319 24 43 chr17 15693276 15693382 -69745098 - MIR SINE MIR -100 162 55 2293 105 3 0 chr17 15694802 15695107 -69743373 + AluSp SINE Alu 1 306 -7 339 65 0 0 chr17 15695140 15695186 -69743294 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 588 290 52 21 chr17 15695290 15695580 -69742900 - L1ME4a LINE L1 -162 5959 5661 853 279 63 95 chr17 15696298 15696628 -69741852 - HAL1 LINE L1 -1156 1351 1047 1834 102 14 53 chr17 15696628 15696769 -69741711 - AluSp SINE Alu -39 274 148 2323 71 16 16 chr17 15696769 15697078 -69741402 - AluSp SINE Alu -4 309 1 1834 102 14 53 chr17 15697078 15697220 -69741260 - AluSp SINE Alu -165 148 2 853 279 63 95 chr17 15697220 15697487 -69740993 - HAL1 LINE L1 -1460 1047 773 244 214 0 0 chr17 15697951 15698007 -69740473 - L1MC4 LINE L1 -60 7982 7927 185 204 41 20 chr17 15698324 15698373 -69740107 - L2 LINE L2 -1 3312 3263 1491 199 87 0 chr17 15698776 15699245 -69739235 + AluJo SINE Alu 1 312 0 267 108 31 31 chr17 15699245 15699299 -69739181 + GA-rich Low_complexity Low_complexity 10 66 0 2975 47 0 0 chr17 15700245 15700608 -69737872 - L1PA5 LINE L1 -2 6152 5790 460 275 74 25 chr17 15701207 15701451 -69737029 - HAL1 LINE L1 -7 2500 2245 2365 89 0 10 chr17 15701651 15701955 -69736525 + AluSg SINE Alu 2 302 -8 364 192 64 16 chr17 15702054 15702179 -69736301 - HAL1 LINE L1 -354 2153 2023 297 322 71 19 chr17 15702317 15702584 -69735896 - HAL1 LINE L1 -703 1804 1524 231 232 0 49 chr17 15702769 15702851 -69735629 - HAL1 LINE L1 -1161 1346 1269 2370 60 0 10 chr17 15702885 15703184 -69735296 + AluY SINE Alu 1 296 -15 235 258 0 16 chr17 15703506 15703568 -69734912 + CT-rich Low_complexity Low_complexity 3 63 0 959 231 20 26 chr17 15703576 15703879 -69734601 - AluY SINE Alu 0 301 1 291 259 9 56 chr17 15704201 15704309 -69734171 + GA-rich Low_complexity Low_complexity 6 108 0 329 261 22 0 chr17 15704310 15704444 -69734036 + G-rich Low_complexity Low_complexity 1 137 0 1781 216 50 29 chr17 15704548 15705093 -69733387 - L1M4 LINE L1 -2170 3976 3421 444 275 7 131 chr17 15705100 15705335 -69733145 + L2 LINE L2 3051 3243 -70 2102 113 0 14 chr17 15705335 15705627 -69732853 - AluSc SINE Alu -21 288 1 444 275 7 131 chr17 15705627 15705689 -69732791 + L2 LINE L2 3243 3311 -2 662 356 50 39 chr17 15705699 15706337 -69732143 - L1M4 LINE L1 -2255 3891 3247 21 71 0 0 chr17 15706531 15706573 -69731907 + AT_rich Low_complexity Low_complexity 1 42 0 2365 103 0 0 chr17 15707957 15708268 -69730212 + AluY SINE Alu 1 311 0 686 273 161 39 chr17 15708982 15709392 -69729088 + MLT1J LTR MaLR 1 460 -51 845 250 70 13 chr17 15709755 15710067 -69728413 + MARNA DNA Mariner 169 498 -88 187 139 0 28 chr17 15711514 15711550 -69726930 - L2 LINE L2 -15 3298 3264 2184 76 23 36 chr17 15711711 15712039 -69726441 - AluSq SINE Alu 0 313 1 213 94 0 0 chr17 15712746 15712778 -69725702 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 459 267 256 5 chr17 15712929 15713120 -69725360 + MIR SINE MIR 2 240 -22 409 338 0 15 chr17 15713154 15713287 -69725193 + MIR SINE MIR 77 207 -55 316 215 99 16 chr17 15713787 15713908 -69724572 + LTR67 LTR ERVL 426 556 -1 290 26 26 0 chr17 15713982 15714021 -69724459 + (TATG)n Simple_repeat Simple_repeat 1 40 0 2235 91 0 10 chr17 15714080 15714378 -69724102 + AluSq SINE Alu 1 295 -18 974 254 48 121 chr17 15714385 15715007 -69723473 - L2 LINE L2 0 3313 2729 2365 77 0 0 chr17 15715135 15715421 -69723059 - AluSc SINE Alu -23 286 1 271 294 176 15 chr17 15716614 15716750 -69721730 + MIR3 SINE MIR 38 195 -13 196 258 75 67 chr17 15716813 15716933 -69721547 - MIR3 SINE MIR -9 199 79 1543 204 120 17 chr17 15717005 15717738 -69720742 + L1ME2 LINE L1 5312 6161 -5 1787 171 58 0 chr17 15719022 15719367 -69719113 + MLT1A1 LTR MaLR 1 365 0 222 338 44 50 chr17 15720006 15720166 -69718314 - L2 LINE L2 -56 3216 3058 2092 127 0 7 chr17 15720952 15721251 -69717229 - AluSg SINE Alu -13 297 1 312 230 58 43 chr17 15721923 15722062 -69716418 + L1ME LINE L1 5664 5804 -317 671 216 9 0 chr17 15722128 15722277 -69716203 + FLAM_A SINE Alu 1 150 0 204 237 17 51 chr17 15722356 15722474 -69716006 + T-rich Low_complexity Low_complexity 2 115 0 310 247 129 87 chr17 15722531 15722588 -69715892 - L1MEc LINE L1 -3987 2409 2356 819 142 8 15 chr17 15722588 15722722 -69715758 - FLAM_C SINE Alu 0 133 1 310 247 129 87 chr17 15722722 15722951 -69715529 - L1MEc LINE L1 -4040 2356 2111 26 64 0 0 chr17 15723405 15723452 -69715028 + AT_rich Low_complexity Low_complexity 1 47 0 467 311 81 28 chr17 15723737 15724171 -69714309 - L1ME3A LINE L1 -286 5867 5411 531 208 0 0 chr17 15724193 15724289 -69714191 - FLAM_A SINE Alu -41 101 6 290 239 76 18 chr17 15724295 15724470 -69714010 - L1ME3A LINE L1 -752 5401 5240 319 263 47 47 chr17 15724493 15724706 -69713774 - L1ME3A LINE L1 -4944 1175 963 394 281 0 89 chr17 15724715 15724861 -69713619 - L2 LINE L2 0 3313 3181 2549 7 0 0 chr17 15724921 15725198 -69713282 - AluYb8 SINE Alu -3 315 39 349 254 102 23 chr17 15725264 15725441 -69713039 - L1ME3A LINE L1 -5257 862 672 187 356 24 89 chr17 15726224 15726808 -69711672 + L2 LINE L2 2191 2736 -578 471 289 112 48 chr17 15726895 15726982 -69711498 + MLT1J2 LTR MaLR 69 149 -301 192 97 0 0 chr17 15726982 15727013 -69711467 + (TG)n Simple_repeat Simple_repeat 2 32 0 471 289 112 48 chr17 15727013 15727282 -69711198 + MLT1J2 LTR MaLR 149 448 -2 264 30 0 0 chr17 15727652 15727685 -69710795 + (TG)n Simple_repeat Simple_repeat 2 34 0 327 277 65 26 chr17 15728731 15728886 -69709594 - MLT1L LTR MaLR -6 609 449 2311 107 0 0 chr17 15729718 15730016 -69708464 + AluSc SINE Alu 1 298 -11 2005 82 3 73 chr17 15730534 15730869 -69707611 - AluY SINE Alu 0 314 1 1167 112 28 0 chr17 15731357 15731536 -69706944 - L1PA13 LINE L1 -7 6156 5973 548 81 69 0 chr17 15731536 15731623 -69706857 + L1P4 LINE L1 5513 5605 -558 614 130 0 0 chr17 15731771 15731871 -69706609 + L1P4 LINE L1 5608 5707 -461 2293 94 7 0 chr17 15732440 15732739 -69705741 + AluSx SINE Alu 2 302 -10 2321 113 3 0 chr17 15732739 15733123 -69705357 + AluSp SINE Alu 1 386 0 2296 148 56 2 chr17 15733137 15733550 -69704930 - LTR47A LTR ERVL -17 435 1 3867 154 64 52 chr17 15733557 15735025 -69703455 - LTR49-int LTR ERV1 -687 6071 4569 9149 159 50 21 chr17 15735040 15736431 -69702049 - LTR49-int LTR ERV1 -1905 4853 3504 3461 147 68 42 chr17 15736431 15737138 -69701342 + LTR8A LTR ERV1 3 727 0 9149 159 50 21 chr17 15737138 15737524 -69700956 - LTR49-int LTR ERV1 -3254 3504 3046 2096 107 3 32 chr17 15737524 15737833 -69700647 - AluSp SINE Alu -13 300 1 9149 159 50 21 chr17 15737833 15737939 -69700541 - LTR49-int LTR ERV1 -3712 3046 2945 941 104 8 0 chr17 15737971 15738105 -69700375 - AluSp/q SINE Alu -4 309 175 1271 159 81 51 chr17 15738105 15738602 -69699878 - LTR49-int LTR ERV1 -2770 3561 1181 463 188 0 0 chr17 15738629 15738726 -69699754 - LTR49-int LTR ERV1 -3220 2726 854 * 940 229 23 36 chr17 15738719 15739027 -69699453 - LTR49-int LTR ERV1 -4060 2271 1984 344 332 35 66 chr17 15739064 15739134 -69699346 - L1 LINE L1 -1635 4511 4440 1995 114 4 4 chr17 15739134 15739454 -69699026 - AluSg SINE Alu 0 320 1 344 332 35 66 chr17 15739454 15739502 -69698978 - L1 LINE L1 -1706 4440 4392 198 0 0 0 chr17 15739502 15739524 -69698956 + (TG)n Simple_repeat Simple_repeat 2 23 0 344 332 35 66 chr17 15739524 15739639 -69698841 - L1 LINE L1 -1754 4392 4284 849 266 145 18 chr17 15739639 15740038 -69698442 - MLT1J2 LTR MaLR 0 450 1 344 332 35 66 chr17 15740038 15740087 -69698393 - L1 LINE L1 -1862 4284 4235 256 327 52 13 chr17 15740228 15740534 -69697946 - L1 LINE L1 -2207 3939 3622 22674 58 3 7 chr17 15740708 15745068 -69693412 - L1PA6 LINE L1 -1 6153 1809 747 119 0 0 chr17 15745079 15745188 -69693292 - L1PA6 LINE L1 -6027 119 11 2465 227 67 47 chr17 15745195 15745890 -69692590 - L1ME1 LINE L1 -63 6103 5358 1962 133 0 20 chr17 15745890 15746051 -69692429 - AluY SINE Alu -15 296 142 279 0 0 0 chr17 15746051 15746082 -69692398 + (TA)n Simple_repeat Simple_repeat 1 31 0 1962 133 0 20 chr17 15746082 15746220 -69692260 - AluY SINE Alu -169 142 3 2465 227 67 47 chr17 15746220 15746623 -69691857 - L1ME1 LINE L1 -808 5358 4965 777 238 34 55 chr17 15746643 15746822 -69691658 - MIR SINE MIR -18 244 70 2507 60 3 0 chr17 15746822 15747124 -69691356 + AluY SINE Alu 1 303 -8 777 238 34 55 chr17 15747124 15747179 -69691301 - MIR SINE MIR -192 70 15 262 259 85 5 chr17 15747227 15747439 -69691041 - L1ME1 LINE L1 -2840 3306 3078 386 305 73 76 chr17 15747670 15747972 -69690508 + L1MC4a LINE L1 6499 6799 -1009 285 349 24 42 chr17 15749422 15749588 -69688892 + L2 LINE L2 2888 3050 -222 1535 148 7 14 chr17 15749668 15749952 -69688528 + Tigger2 DNA MER2_type 1 282 -2436 718 161 8 0 chr17 15749952 15750070 -69688410 + AluSq/x SINE Alu 1 119 -193 2507 162 32 4 chr17 15750098 15750562 -69687918 + Tigger2 DNA MER2_type 268 744 -1974 901 161 17 6 chr17 15750685 15750859 -69687621 - MER50 LTR ERV1 -23 711 536 1285 101 11 0 chr17 15750877 15751056 -69687424 - AluSg/x SINE Alu 0 312 132 2846 153 24 22 chr17 15751057 15751608 -69686872 - MER50 LTR ERV1 -182 552 1 1485 157 4 15 chr17 15751633 15751894 -69686586 + Tigger2 DNA MER2_type 2451 2708 -10 2060 114 0 0 chr17 15752709 15753032 -69685448 + AluSc SINE Alu 1 323 0 1199 175 5 14 chr17 15753245 15753456 -69685024 - AluJo SINE Alu -20 292 84 374 294 145 48 chr17 15754785 15755013 -69683467 + L3 LINE CR1 1302 1551 -26 243 307 133 35 chr17 15755057 15755232 -69683248 + MIR3 SINE MIR 2 191 -58 461 339 27 22 chr17 15755308 15755491 -69682989 - MIR3 SINE MIR -21 187 4 234 289 58 41 chr17 15755548 15755669 -69682811 - L2 LINE L2 -17 3255 3133 236 270 0 27 chr17 15756269 15756343 -69682137 + MIR SINE MIR 90 161 -101 225 65 0 0 chr17 15756718 15756749 -69681731 + (TG)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr17 15756825 15756849 -69681631 + AT_rich Low_complexity Low_complexity 1 24 0 2321 79 3 7 chr17 15756849 15757154 -69681326 - AluY SINE Alu -7 304 1 211 208 21 21 chr17 15757614 15757662 -69680818 - L2 LINE L2 -2 3270 3223 423 177 0 0 chr17 15757886 15757965 -69680515 - AluJ/FRAM SINE Alu -15 297 219 212 174 38 98 chr17 15757977 15758109 -69680371 + (ATATG)n Simple_repeat Simple_repeat 5 128 0 406 144 17 56 chr17 15758109 15758289 -69680191 + (TATG)n Simple_repeat Simple_repeat 3 175 0 439 150 0 62 chr17 15758504 15758531 -69679949 - AluJo SINE Alu -237 75 48 4532 131 35 17 chr17 15758531 15759302 -69679178 - LTR1 LTR ERV1 0 785 1 439 150 0 62 chr17 15759302 15759354 -69679126 - AluJo SINE Alu -264 48 1 444 260 89 76 chr17 15759545 15760007 -69678473 + MLT1K LTR MaLR 5 472 -4 313 283 11 11 chr17 15760199 15760291 -69678189 - MIR SINE MIR -6 256 165 225 211 88 0 chr17 15760294 15760351 -69678129 - MIR SINE MIR -75 187 126 192 225 0 0 chr17 15761442 15761482 -69676998 + L2 LINE L2 3274 3313 0 210 71 0 0 chr17 15761512 15761540 -69676940 + (TG)n Simple_repeat Simple_repeat 2 29 0 936 303 95 49 chr17 15762926 15763180 -69675300 - L2 LINE L2 -1 3312 3071 2138 120 14 0 chr17 15763180 15763472 -69675008 + AluSq SINE Alu 1 296 -17 936 303 95 49 chr17 15763472 15763726 -69674754 - L2 LINE L2 -242 3071 2779 188 246 29 58 chr17 15763877 15763946 -69674534 - MIR3 SINE MIR -11 197 131 2241 148 43 45 chr17 15764046 15764492 -69673988 + MER65A LTR ERV1 1 445 0 323 121 24 24 chr17 15764543 15764626 -69673854 + CT-rich Low_complexity Low_complexity 1 83 0 601 146 15 44 chr17 15764767 15764904 -69673576 + MLT1E3 LTR MaLR 72 204 -420 232 244 13 51 chr17 15765035 15765113 -69673367 + MLT2C1 LTR ERVL 269 343 -54 1734 242 17 13 chr17 15765121 15765650 -69672830 + L1ME1 LINE L1 3736 4266 -1880 10128 207 22 39 chr17 15765665 15769067 -69669413 + L1PA10 LINE L1 10 3358 -3103 6101 51 1 0 chr17 15770403 15771186 -69667294 - L1PA6 LINE L1 0 6154 5371 6537 116 8 2 chr17 15771361 15774412 -69664068 + L1PA10 LINE L1 3340 6479 -4 1671 249 26 29 chr17 15774416 15774733 -69663747 + L1ME1 LINE L1 4254 4570 -1576 2403 75 0 0 chr17 15774733 15775026 -69663454 - AluY SINE Alu -18 293 1 1671 249 26 29 chr17 15775026 15775291 -69663189 + L1ME1 LINE L1 4570 4834 -1312 702 52 31 0 chr17 15775296 15775393 -69663087 + L1PA8A LINE L1 5385 5484 -647 1928 197 70 27 chr17 15775395 15776347 -69662133 + L1ME1 LINE L1 4842 5842 -324 508 208 50 0 chr17 15776426 15776546 -69661934 - MER3 DNA MER1_type -49 160 35 456 149 149 0 chr17 15877626 15877720 -69560760 - MIR SINE MIR -82 180 73 2090 128 0 0 chr17 15877733 15878046 -69560434 - AluSq SINE Alu 0 313 1 456 19 0 0 chr17 15878075 15878128 -69560352 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 1673 184 3 19 chr17 15878128 15878443 -69560037 - AluJo SINE Alu 0 312 3 203 313 62 23 chr17 15878749 15878877 -69559603 - MIR SINE MIR -44 218 86 2283 82 0 0 chr17 15879013 15879304 -69559176 + AluSg SINE Alu 1 291 -19 408 250 80 9 chr17 15879308 15879420 -69559060 + MIR SINE MIR 72 191 -71 1970 111 0 14 chr17 15879420 15879739 -69558741 + AluSx SINE Alu 1 315 0 681 120 19 9 chr17 15879766 15879874 -69558606 + FRAM SINE Alu 6 114 -62 1233 151 5 32 chr17 15879874 15880093 -69558387 + AluJo SINE Alu 85 297 -15 34 34 0 17 chr17 15880134 15880164 -69558316 + AT_rich Low_complexity Low_complexity 1 31 -27 1259 192 51 11 chr17 15880164 15880288 -69558192 + AluJb SINE Alu 2 120 -192 369 0 0 0 chr17 15880288 15880329 -69558151 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1259 192 51 11 chr17 15880329 15880480 -69558000 + AluJb SINE Alu 120 288 -24 34 34 0 17 chr17 15880480 15880508 -69557972 + AT_rich Low_complexity Low_complexity 31 58 0 2264 99 0 0 chr17 15880510 15880804 -69557676 + AluSx SINE Alu 1 294 -18 1919 124 3 13 chr17 15880963 15881278 -69557202 - AluSx SINE Alu 0 312 1 995 249 83 18 chr17 15881286 15881612 -69556868 + L2 LINE L2 2830 3176 -137 1503 203 26 7 chr17 15881612 15881918 -69556562 - AluJo SINE Alu 0 312 1 1980 115 42 0 chr17 15882008 15882296 -69556184 - AluSx SINE Alu -12 300 1 305 89 22 0 chr17 15883523 15883568 -69554912 - MLT1K LTR MaLR -108 480 435 656 208 13 26 chr17 15883577 15883731 -69554749 - L2 LINE L2 -1 3312 3161 1698 111 0 4 chr17 15883742 15883977 -69554503 + AluSx SINE Alu 9 242 -70 1886 63 4 0 chr17 15884078 15884316 -69554164 - AluY SINE Alu -72 239 1 537 302 44 0 chr17 15884322 15884504 -69553976 - L2 LINE L2 -609 2705 2516 2209 169 127 2 chr17 15884579 15885028 -69553452 + MLT1D LTR MaLR 1 505 0 898 263 0 0 chr17 15885100 15885159 -69553321 - MER3 DNA MER1_type 0 209 151 1815 135 0 96 chr17 15885159 15885492 -69552988 + AluJo SINE Alu 1 301 -1 898 263 0 0 chr17 15885492 15885641 -69552839 - MER3 DNA MER1_type -57 152 1 1639 159 0 18 chr17 15885695 15885978 -69552502 + AluJb SINE Alu 1 278 -34 207 0 0 0 chr17 15885982 15886005 -69552475 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 473 295 84 32 chr17 15886046 15886236 -69552244 - MIR SINE MIR -51 211 12 294 170 0 0 chr17 15886242 15886295 -69552185 + L2 LINE L2 3004 3056 -216 180 97 0 0 chr17 15886392 15886423 -69552057 + (TTTAA)n Simple_repeat Simple_repeat 3 33 0 2195 84 3 0 chr17 15886423 15886708 -69551772 - AluSx SINE Alu -26 286 1 747 88 26 0 chr17 15886708 15886821 -69551659 - MER41A LTR ERV1 -438 116 1 1168 118 0 0 chr17 15886821 15886991 -69551489 - MER41A-int LTR ERV1 -2 5944 5775 2430 60 0 25 chr17 15886994 15887308 -69551172 - AluSp SINE Alu -7 306 1 1473 152 7 67 chr17 15887414 15887511 -69550969 + MER66B LTR ERV1 1 102 -384 2177 105 3 10 chr17 15887511 15887824 -69550656 - AluSx SINE Alu -1 311 1 1473 152 7 67 chr17 15887824 15888009 -69550471 + MER66B LTR ERV1 102 266 -220 2243 103 0 6 chr17 15888057 15888369 -69550111 + AluY SINE Alu 1 310 -1 180 125 0 0 chr17 15888374 15888406 -69550074 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 398 141 14 14 chr17 15888426 15888497 -69549983 + MER66B LTR ERV1 400 470 -16 22 0 0 0 chr17 15888930 15888952 -69549528 + AT_rich Low_complexity Low_complexity 1 22 0 2053 106 3 3 chr17 15888959 15889280 -69549200 - AluSq SINE Alu 0 321 1 661 239 45 0 chr17 15889390 15889566 -69548914 + L2 LINE L2 2282 2465 -849 2347 57 7 0 chr17 15889591 15889888 -69548592 + AluY SINE Alu 1 299 -12 1684 162 7 30 chr17 15889891 15890194 -69548286 - AluJb SINE Alu -16 296 1 1895 149 7 0 chr17 15890341 15890636 -69547844 + AluSx SINE Alu 1 297 -15 215 267 313 8 chr17 15891563 15891694 -69546786 + MIR SINE MIR 34 204 -58 835 185 0 6 chr17 15891916 15892073 -69546407 + AluJb SINE Alu 140 295 -17 2281 77 7 0 chr17 15892077 15892376 -69546104 - AluSp SINE Alu -12 301 1 1202 97 0 51 chr17 15892823 15893018 -69545462 - AluY SINE Alu 0 311 127 318 106 0 0 chr17 15893020 15893067 -69545413 + Alu SINE Alu 248 294 -7 232 271 164 8 chr17 15893066 15893188 -69545292 - MLT1K LTR MaLR -43 545 405 * 511 342 48 42 chr17 15893277 15893610 -69544870 - MLT1K LTR MaLR -243 345 11 293 299 58 109 chr17 15893773 15894047 -69544433 + L2 LINE L2 3004 3263 -9 2005 147 3 6 chr17 15894050 15894363 -69544117 + AluJo SINE Alu 1 312 0 264 240 67 0 chr17 15895452 15895527 -69542953 + L1MC/D LINE L1 5575 5654 -2154 2203 93 0 0 chr17 15895733 15896024 -69542456 - AluSx SINE Alu -21 291 1 415 222 16 79 chr17 15896073 15896199 -69542281 + MIR SINE MIR 144 261 -1 350 239 14 2 chr17 15896292 15896377 -69542103 - MIR SINE MIR -95 113 27 2366 80 0 10 chr17 15896403 15896715 -69541765 - AluSp SINE Alu -4 309 1 366 199 98 64 chr17 15897286 15897328 -69541152 - MLT1J LTR MaLR -1 476 437 2345 81 0 13 chr17 15897328 15897635 -69540845 + AluY SINE Alu 1 303 -8 366 199 98 64 chr17 15897635 15897772 -69540708 - MLT1J LTR MaLR -40 437 257 1318 164 23 0 chr17 15897772 15897986 -69540494 - MER20 DNA MER1_type 0 219 1 366 199 98 64 chr17 15897986 15898002 -69540478 - MLT1J LTR MaLR -220 257 243 2074 130 7 0 chr17 15898111 15898418 -69540062 + AluSg SINE Alu 1 309 -1 1944 112 47 0 chr17 15898433 15898710 -69539770 + AluSx SINE Alu 1 290 -22 768 163 8 0 chr17 15898748 15898877 -69539603 - FLAM_C SINE Alu -1 142 13 419 311 13 13 chr17 15898990 15899141 -69539339 - L1ME3A LINE L1 -8 6162 6012 1247 171 24 0 chr17 15899210 15899421 -69539059 + MER20 DNA MER1_type 4 219 0 265 311 56 0 chr17 15899429 15899519 -69538961 + MLT1J2 LTR MaLR 266 360 -90 393 219 24 0 chr17 15899986 15900068 -69538412 - MIR SINE MIR -162 100 17 492 241 97 28 chr17 15900068 15900213 -69538267 - MER58B DNA MER1_type 0 341 187 1294 170 12 47 chr17 15900218 15900379 -69538101 - AluJo SINE Alu -15 297 147 2245 97 0 3 chr17 15900379 15900677 -69537803 - AluSx SINE Alu -15 297 1 1294 170 12 47 chr17 15900677 15900768 -69537712 - AluJo SINE Alu -165 147 54 1788 176 10 0 chr17 15900944 15901239 -69537241 + AluJb SINE Alu 1 298 -14 2210 79 0 0 chr17 15901264 15901542 -69536938 + AluSx SINE Alu 4 281 -31 875 212 36 18 chr17 15901940 15902162 -69536318 - MER46A DNA MER2_type -3 233 8 640 312 84 26 chr17 15902200 15902431 -69536049 + L2 LINE L2 2891 3147 -166 1787 109 72 0 chr17 15902431 15902731 -69535749 - AluSx SINE Alu 0 319 1 640 312 84 26 chr17 15902731 15902803 -69535677 + L2 LINE L2 3147 3213 -100 269 256 207 0 chr17 15902803 15902924 -69535556 + MIR SINE MIR 2 147 -115 1994 159 0 6 chr17 15902937 15903251 -69535229 + AluJb SINE Alu 1 312 0 2240 92 23 10 chr17 15903259 15903565 -69534915 + AluSq SINE Alu 2 311 -2 517 241 37 0 chr17 15903603 15903711 -69534769 + L2 LINE L2 3201 3312 -1 1756 131 69 10 chr17 15903764 15904054 -69534426 + AluJb SINE Alu 1 307 -5 1658 169 0 44 chr17 15904521 15904707 -69533773 - AluJo SINE Alu 0 311 142 2122 97 0 19 chr17 15904707 15905015 -69533465 - AluSc SINE Alu -7 302 1 1658 169 0 44 chr17 15905015 15905152 -69533328 - AluJo SINE Alu -169 142 1 2173 113 3 3 chr17 15905297 15905599 -69532881 + AluSx SINE Alu 1 302 -10 647 292 88 7 chr17 15905829 15906113 -69532367 - MLT1J2 LTR MaLR -143 307 1 1827 146 14 14 chr17 15906218 15906512 -69531968 + AluJo SINE Alu 2 295 -17 455 299 44 0 chr17 15906514 15906651 -69531829 - MIR SINE MIR -93 169 27 250 306 20 61 chr17 15906890 15906988 -69531492 - MER5B DNA MER1_type 0 178 85 2130 127 0 0 chr17 15907014 15907314 -69531166 - AluSx SINE Alu -12 300 1 300 253 0 0 chr17 15907623 15907698 -69530782 - MLT1K LTR MaLR 0 588 514 2152 109 0 0 chr17 15908030 15908343 -69530137 - AluSx SINE Alu 0 313 1 2009 89 28 18 chr17 15908354 15908636 -69529844 - AluSx SINE Alu -27 285 1 762 253 71 49 chr17 15909028 15909336 -69529144 - L2 LINE L2 -19 3294 2980 2113 101 7 26 chr17 15909371 15909677 -69528803 + AluSx SINE Alu 1 300 -12 437 222 35 7 chr17 15909777 15909921 -69528559 - MER33 DNA MER1_type -73 251 104 371 211 13 0 chr17 15909918 15909994 -69528486 - MER33 DNA MER1_type -247 77 1 * 430 203 73 0 chr17 15910004 15910127 -69528353 - L2 LINE L2 -343 2970 2839 2378 75 3 0 chr17 15910161 15910468 -69528012 - AluSp SINE Alu -5 308 1 210 366 0 0 chr17 15910549 15910620 -69527860 - L2 LINE L2 -524 2790 2720 207 283 0 19 chr17 15910654 15910707 -69527773 - MIR SINE MIR -185 77 26 1776 135 0 18 chr17 15910747 15911028 -69527452 + AluSx SINE Alu 1 276 -36 630 213 22 0 chr17 15911028 15911164 -69527316 + ERVL LTR ERVL 1478 1616 -4148 1916 128 10 3 chr17 15911165 15911454 -69527026 + AluJo SINE Alu 1 291 -21 198 235 103 22 chr17 15911544 15911680 -69526800 - L2 LINE L2 -211 3061 2915 1985 349 57 3 chr17 15911774 15912444 -69526036 - L1MB8 LINE L1 0 6178 5473 428 69 0 83 chr17 15912447 15912519 -69525961 + L1PA4 LINE L1 6088 6153 -2 1081 190 28 0 chr17 15912519 15912730 -69525750 + MER41-int LTR ERV1 452 668 -5278 1749 138 21 48 chr17 15912736 15912913 -69525567 - AluSx SINE Alu 0 309 129 180 0 0 0 chr17 15912913 15912933 -69525547 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1910 116 22 0 chr17 15912942 15913209 -69525271 - AluSx SINE Alu -39 273 1 1749 138 21 48 chr17 15913209 15913338 -69525142 - AluSx SINE Alu -188 121 1 813 170 0 0 chr17 15913338 15913473 -69525007 - AluSq/x SINE Alu -178 135 1 774 305 82 10 chr17 15913473 15913765 -69524715 - L2 LINE L2 -7 3306 2994 1973 122 14 3 chr17 15914695 15915005 -69523475 - AluSx SINE Alu 0 312 1 256 309 122 16 chr17 15915067 15915190 -69523290 - MIR SINE MIR -10 252 117 386 377 23 9 chr17 15915383 15915598 -69522882 - MIR SINE MIR -24 238 21 1780 112 0 4 chr17 15915626 15915876 -69522604 - AluSx SINE Alu -8 304 56 250 368 0 8 chr17 15916115 15916240 -69522240 + CT-rich Low_complexity Low_complexity 1 124 0 259 299 169 47 chr17 15916514 15916641 -69521839 - MIR SINE MIR -62 146 32 228 271 35 12 chr17 15917131 15917216 -69521264 - L2 LINE L2 -321 2951 2865 616 289 30 64 chr17 15917242 15917540 -69520940 - L2 LINE L2 -8 3264 2977 456 288 15 15 chr17 15918056 15918188 -69520292 + MIR SINE MIR 32 163 -99 2162 103 10 0 chr17 15918188 15918489 -69519991 + AluSq SINE Alu 1 304 -9 202 211 0 0 chr17 15918854 15918892 -69519588 + (CA)n Simple_repeat Simple_repeat 1 38 0 291 326 35 35 chr17 15918996 15919137 -69519343 - MER5A DNA MER1_type -4 185 45 548 262 81 65 chr17 15920187 15920435 -69518045 - L2 LINE L2 -49 3223 2972 417 289 151 50 chr17 15921397 15921815 -69516665 - L2 LINE L2 0 3272 2813 226 301 98 24 chr17 15922020 15922143 -69516337 - MIR3 SINE MIR -63 145 14 278 273 10 40 chr17 15922335 15922434 -69516046 - L2 LINE L2 -47 3266 3171 1802 132 0 24 chr17 15922594 15922881 -69515599 + AluJo SINE Alu 15 294 -18 2133 108 7 0 chr17 15922881 15923175 -69515305 + AluSx SINE Alu 1 297 -15 228 245 20 0 chr17 15923555 15923604 -69514876 + L2 LINE L2 3226 3275 -38 388 271 51 0 chr17 15924122 15924240 -69514240 - MIR SINE MIR -126 136 13 441 230 26 0 chr17 15924733 15924846 -69513634 - MLT1K LTR MaLR -76 512 397 203 77 0 51 chr17 15925577 15925616 -69512864 + (TCTCTG)n Simple_repeat Simple_repeat 2 38 0 218 200 0 75 chr17 15925744 15925824 -69512656 + (TCTCTG)n Simple_repeat Simple_repeat 1 74 0 2283 99 0 3 chr17 15926730 15927033 -69511447 + AluSq SINE Alu 1 302 -11 1778 126 4 7 chr17 15927035 15927305 -69511175 + AluSx SINE Alu 44 312 0 930 273 121 13 chr17 15927432 15927881 -69510599 + L1M4 LINE L1 3391 3885 -2261 1726 184 0 3 chr17 15927881 15928175 -69510305 + AluJo SINE Alu 1 293 -19 895 121 66 0 chr17 15928176 15928342 -69510138 + LOR1a LTR ERV1 321 497 0 1400 114 19 84 chr17 15928370 15928632 -69509848 - AluJb SINE Alu 0 312 68 563 116 53 0 chr17 15928639 15928734 -69509746 - LOR1a LTR ERV1 -77 420 321 1074 181 0 0 chr17 15928735 15928906 -69509574 - AluSx SINE Alu -19 291 121 476 138 0 0 chr17 15928906 15928971 -69509509 - AluSx SINE Alu -247 65 1 2172 101 3 7 chr17 15928983 15929289 -69509191 - AluSp SINE Alu -8 305 1 403 288 76 36 chr17 15929322 15929470 -69509010 - L1ME3A LINE L1 -32 6133 5992 2163 105 3 0 chr17 15929470 15929764 -69508716 - AluSq SINE Alu -18 295 1 403 288 76 36 chr17 15929764 15929897 -69508583 - L1ME3A LINE L1 -173 5992 5833 181 264 91 16 chr17 15930010 15930131 -69508349 - L2 LINE L2 -211 3061 2932 2208 65 0 83 chr17 15930293 15930411 -69508069 + AluSp SINE Alu 1 127 -186 2219 48 0 4 chr17 15930411 15930684 -69507796 + AluY SINE Alu 39 310 -1 2208 65 0 83 chr17 15930684 15930890 -69507590 + AluSp SINE Alu 127 298 -15 2246 114 0 0 chr17 15930900 15931206 -69507274 + AluSg SINE Alu 1 306 -4 350 198 12 0 chr17 15931206 15931292 -69507188 - L1M4 LINE L1 -868 5278 5192 862 133 0 30 chr17 15931297 15931432 -69507048 - FLAM_C SINE Alu -12 131 1 1903 145 0 10 chr17 15931474 15931770 -69506710 - AluJb SINE Alu -19 293 1 1156 194 19 59 chr17 15931775 15931812 -69506668 - L1M4 LINE L1 -946 5200 5163 1800 154 11 4 chr17 15931812 15932113 -69506367 - AluJo SINE Alu 0 305 3 1156 194 19 59 chr17 15932113 15932445 -69506035 - L1M4 LINE L1 -983 5163 4845 2177 116 3 0 chr17 15932445 15932748 -69505732 + AluSx SINE Alu 1 304 -8 1156 107 0 30 chr17 15932748 15932917 -69505563 + AluSg/x SINE Alu 134 297 -15 1551 138 3 105 chr17 15932928 15933232 -69505248 - AluSx SINE Alu -39 273 1 390 340 40 13 chr17 15933390 15933540 -69504940 + MIR SINE MIR 104 257 -5 1985 132 0 7 chr17 15933738 15934025 -69504455 - AluSx SINE Alu -27 285 1 2154 123 0 0 chr17 15934152 15934453 -69504027 - AluSx SINE Alu -11 301 1 493 245 221 16 chr17 15934556 15934805 -69503675 - MLT1B LTR MaLR -24 366 67 269 48 24 0 chr17 15934916 15934958 -69503522 + HERVH LTR ERV1 3951 3993 -3720 3955 132 30 2 chr17 15934960 15935604 -69502876 + HERVH LTR ERV1 4488 5149 -2564 1247 134 18 5 chr17 15935605 15935822 -69502658 + HERVH LTR ERV1 5600 5819 -1894 * 2183 82 50 18 chr17 15935820 15936200 -69502280 + HERVH LTR ERV1 7322 7713 0 3221 77 25 9 chr17 15936200 15936641 -69501839 + LTR7 LTR ERV1 1 448 -2 3881 115 12 10 chr17 15936643 15937692 -69500788 + HERVH LTR ERV1 1 1239 -6474 882 72 30 48 chr17 15937792 15937958 -69500522 + HERVH LTR ERV1 7551 7713 0 3214 82 25 9 chr17 15937958 15938399 -69500081 + LTR7 LTR ERV1 1 448 -2 1307 184 90 17 chr17 15939179 15939467 -69499013 + AluJo SINE Alu 1 309 -3 2053 120 0 7 chr17 15939470 15939782 -69498698 + AluSx SINE Alu 1 310 0 1713 92 9 0 chr17 15939825 15940052 -69498428 + AluSq SINE Alu 1 229 -84 604 295 19 0 chr17 15940166 15940322 -69498158 + MIR SINE MIR 77 235 -27 1763 124 84 0 chr17 15940407 15940680 -69497800 - AluSx SINE Alu -16 296 1 2101 86 3 54 chr17 15940722 15941036 -69497444 - AluSx SINE Alu -14 298 1 247 289 0 0 chr17 15941064 15941140 -69497340 + (TG)n Simple_repeat Simple_repeat 1 76 0 2286 95 0 16 chr17 15941533 15941848 -69496632 + AluSx SINE Alu 1 310 -2 450 338 30 10 chr17 15942025 15942226 -69496254 - MIR SINE MIR -19 243 39 327 254 0 0 chr17 16042413 16042480 -69396000 + MER117 DNA MER1_type 97 163 -34 1385 151 91 47 chr17 16042530 16042848 -69395632 + THE1C LTR MaLR 1 332 -43 1038 124 7 7 chr17 16042948 16043101 -69395379 - AluSx SINE Alu -159 153 1 391 338 18 5 chr17 16043218 16043440 -69395040 - L1M4 LINE L1 -1098 5048 4824 282 290 117 6 chr17 16043555 16043717 -69394763 - L1M4 LINE L1 -1005 5141 4962 583 290 29 36 chr17 16043819 16044136 -69394344 + MLT1I LTR MaLR 91 450 0 299 316 11 0 chr17 16044169 16044343 -69394137 - L1M4 LINE L1 -1231 4915 4740 2225 105 3 3 chr17 16044343 16044639 -69393841 - AluY SINE Alu -15 296 1 552 278 68 18 chr17 16044649 16045185 -69393295 - L1M4 LINE L1 -1497 4649 4027 493 342 6 6 chr17 16045306 16045464 -69393016 + L1MEc LINE L1 148 305 -6091 782 315 83 15 chr17 16045471 16045880 -69392600 + L3 LINE CR1 1130 1566 -11 2271 83 28 0 chr17 16045943 16046233 -69392247 - AluY SINE Alu -13 298 1 243 0 0 0 chr17 16046353 16046380 -69392100 + (TG)n Simple_repeat Simple_repeat 2 28 0 927 189 6 6 chr17 16046383 16046552 -69391928 - AluJo SINE Alu -23 289 121 2090 106 20 3 chr17 16046757 16047049 -69391431 - AluSx SINE Alu -15 297 1 2348 86 13 0 chr17 16047049 16047352 -69391128 - AluSx SINE Alu -5 307 1 2599 47 7 0 chr17 16047358 16047657 -69390823 - AluY SINE Alu -10 301 1 233 297 0 0 chr17 16047744 16047808 -69390672 - L2 LINE L2 -347 2925 2862 414 0 0 0 chr17 16047808 16047854 -69390626 + (TG)n Simple_repeat Simple_repeat 2 47 0 21 0 0 0 chr17 16047994 16048015 -69390465 + AT_rich Low_complexity Low_complexity 1 21 0 310 343 9 0 chr17 16048943 16049048 -69389432 - L2 LINE L2 -11 3302 3197 1847 179 23 20 chr17 16049062 16049409 -69389071 + MLT2C1 LTR ERVL 1 348 -49 201 74 0 0 chr17 16049410 16049437 -69389043 + (TG)n Simple_repeat Simple_repeat 1 27 0 456 280 45 25 chr17 16049554 16049711 -69388769 + MIR SINE MIR 37 196 -66 212 292 101 11 chr17 16049728 16049817 -69388663 - MIR SINE MIR -150 112 16 284 305 23 0 chr17 16050074 16050177 -69388303 + MIR SINE MIR 55 160 -48 1542 130 59 6 chr17 16050674 16050984 -69387496 + LTR54 LTR ERV1 1 376 -134 241 152 152 30 chr17 16051011 16051077 -69387403 + MER57A LTR ERV1 330 403 0 346 219 0 0 chr17 16051283 16051356 -69387124 - MIR SINE MIR -15 247 175 552 126 41 84 chr17 16051836 16051977 -69386503 - L1 LINE L1 -780 5366 5232 271 185 19 0 chr17 16052001 16052055 -69386425 - L2 LINE L2 -68 3245 3191 180 111 0 0 chr17 16052088 16052115 -69386365 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 762 241 58 10 chr17 16052537 16052744 -69385736 + L1ME1 LINE L1 4112 4328 -1818 3079 206 76 43 chr17 16052791 16053034 -69385446 + L1ME1 LINE L1 5073 5307 -859 1775 164 20 10 chr17 16053034 16053327 -69385153 + AluJo SINE Alu 1 296 -16 3079 206 76 43 chr17 16053327 16054127 -69384353 + L1ME1 LINE L1 5307 6151 -15 444 286 43 31 chr17 16054186 16054347 -69384133 + MIR SINE MIR 21 183 -79 224 272 310 19 chr17 16054740 16055001 -69383479 - L2 LINE L2 -417 2897 2561 243 286 20 51 chr17 16059963 16060061 -69378419 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 16060974 16060995 -69377485 + AT_rich Low_complexity Low_complexity 1 21 0 424 181 14 0 chr17 16061019 16061091 -69377389 + 7SLRNA srpRNA srpRNA 12 84 -236 279 0 0 0 chr17 16061120 16061151 -69377329 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 21 36 0 0 chr17 16061249 16061277 -69377203 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 16062471 16062506 -69375974 + AT_rich Low_complexity Low_complexity 1 35 0 257 233 105 0 chr17 16062741 16062827 -69375653 + L2 LINE L2 3219 3313 0 461 219 110 55 chr17 16062839 16063003 -69375477 - MIR SINE MIR -28 234 62 362 293 9 17 chr17 16063093 16063209 -69375271 - MIR SINE MIR -69 139 25 324 103 138 0 chr17 16063742 16063800 -69374680 - MER5A DNA MER1_type -120 69 4 410 302 69 35 chr17 16065200 16065488 -69372992 + L2 LINE L2 2903 3200 -72 192 180 40 40 chr17 16065754 16065804 -69372676 + MIR SINE MIR 97 146 -62 950 287 30 43 chr17 16065917 16066377 -69372103 + L1ME4a LINE L1 5486 5939 -182 216 97 0 0 chr17 16066940 16066971 -69371509 + (T)n Simple_repeat Simple_repeat 1 31 0 8694 100 21 25 chr17 16067274 16068579 -69369901 - HSMAR2 DNA Mariner -1 1301 1 467 289 88 18 chr17 16072019 16072247 -69366233 + MIR SINE MIR 2 245 -17 2176 106 7 0 chr17 16073277 16073570 -69364910 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 16073675 16073703 -69364777 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 216 0 0 0 chr17 16074278 16074302 -69364178 + (T)n Simple_repeat Simple_repeat 1 24 0 2294 89 0 3 chr17 16074805 16075098 -69363382 + AluSg1 SINE Alu 1 292 -17 2137 136 0 0 chr17 16075610 16075911 -69362569 - AluSq SINE Alu -12 301 1 2453 81 3 0 chr17 16076173 16076470 -69362010 + AluY SINE Alu 1 298 -13 2326 107 0 0 chr17 16077042 16077351 -69361129 + AluSc SINE Alu 1 309 0 1745 101 8 36 chr17 16077920 16078168 -69360312 - AluSq SINE Alu -72 241 1 2247 98 0 23 chr17 16079329 16079636 -69358844 + AluSc SINE Alu 2 301 -8 747 201 6 13 chr17 16079836 16079995 -69358485 - MIR SINE MIR -98 164 7 215 338 0 0 chr17 16080277 16080345 -69358135 + L2 LINE L2 3205 3272 0 303 150 0 0 chr17 16080346 16080406 -69358074 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 519 234 37 107 chr17 16080753 16080877 -69357603 + MIR SINE MIR 34 165 -97 2302 115 0 0 chr17 16080877 16081173 -69357307 + AluSc SINE Alu 1 296 -13 519 234 37 107 chr17 16081173 16081220 -69357260 + MIR SINE MIR 165 186 -76 1164 184 14 5 chr17 16081220 16081437 -69357043 + MER20 DNA MER1_type 1 219 0 519 234 37 107 chr17 16081437 16081508 -69356972 + MIR SINE MIR 186 260 -2 642 232 16 54 chr17 16081765 16081917 -69356563 + MIR SINE MIR 8 153 -109 2597 50 0 0 chr17 16081917 16082214 -69356266 + AluY SINE Alu 1 297 -14 642 232 16 54 chr17 16082214 16082246 -69356234 + MIR SINE MIR 153 185 -77 1006 281 100 75 chr17 16082495 16082750 -69355730 + L1ME4a LINE L1 3947 4194 -1952 2330 86 3 13 chr17 16082750 16083053 -69355427 + AluSc SINE Alu 1 300 -9 1006 281 100 75 chr17 16083053 16083110 -69355370 + L1ME4a LINE L1 4194 4248 -1898 2636 61 0 0 chr17 16083110 16083421 -69355059 + AluY SINE Alu 1 311 0 1006 281 100 75 chr17 16083421 16083813 -69354667 + L1ME4a LINE L1 4248 4629 -1517 2491 73 0 0 chr17 16083813 16084115 -69354365 + AluY SINE Alu 1 302 -9 1006 281 100 75 chr17 16084115 16084507 -69353973 + L1ME4a LINE L1 4629 5072 -1074 2636 23 7 3 chr17 16084607 16084908 -69353572 - AluY SINE Alu -8 303 2 1880 85 101 4 chr17 16084908 16085166 -69353314 - AluSp SINE Alu -30 283 1 927 196 20 20 chr17 16085235 16085434 -69353046 + MLT2D LTR ERVL 216 414 0 1107 296 68 43 chr17 16085434 16085773 -69352707 + L1ME4a LINE L1 5380 5740 -430 2234 91 0 26 chr17 16085773 16086080 -69352400 + AluY SINE Alu 1 299 -12 1107 296 68 43 chr17 16086080 16086298 -69352182 + L1ME4a LINE L1 5740 5951 -219 2441 55 0 10 chr17 16086528 16086819 -69351661 - AluY SINE Alu -23 288 1 270 284 0 0 chr17 16087661 16087728 -69350752 + MER103 DNA DNA 98 164 -2 280 217 17 0 chr17 16087990 16088050 -69350430 + MER94 DNA DNA 2 62 -72 868 178 13 13 chr17 16088050 16088207 -69350273 - FRAM SINE Alu -16 160 4 1254 177 5 9 chr17 16088299 16088519 -69349961 + AluSg/x SINE Alu 72 290 -20 308 264 0 22 chr17 16088572 16088663 -69349817 + L1MC4 LINE L1 6615 6703 -1339 329 310 46 23 chr17 16089098 16089272 -69349208 + L1ME4a LINE L1 5944 6121 0 2434 81 0 3 chr17 16090145 16090442 -69348038 - AluSc SINE Alu -13 296 1 2217 114 0 0 chr17 16090446 16090736 -69347744 - AluSq SINE Alu -23 290 1 191 328 0 0 chr17 16090828 16090886 -69347594 - MIR SINE MIR -60 148 91 184 183 0 42 chr17 16090918 16090989 -69347491 + CT-rich Low_complexity Low_complexity 4 71 0 299 304 45 9 chr17 16091494 16091606 -69346874 + MIR SINE MIR 32 147 -61 2367 104 0 13 chr17 16091828 16092144 -69346336 - AluSx SINE Alu 0 312 1 3614 106 66 2 chr17 16092163 16092708 -69345772 - LTR19B LTR ERV1 0 580 1 281 130 8 4 chr17 16092903 16092957 -69345523 + MIR SINE MIR 103 158 -50 2421 86 3 0 chr17 16093001 16093304 -69345176 - AluY SINE Alu -7 304 1 707 241 37 87 chr17 16093307 16093606 -69344874 + MER102a DNA MER1_type 33 316 -14 2390 56 0 33 chr17 16094208 16094512 -69343968 + AluY SINE Alu 1 294 -17 191 88 29 0 chr17 16094810 16094844 -69343636 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2482 44 0 20 chr17 16096180 16096476 -69342004 - AluY SINE Alu -21 290 1 410 258 11 86 chr17 16096556 16096742 -69341738 + L1MC5 LINE L1 7742 7913 -48 2314 68 37 3 chr17 16097300 16097595 -69340885 - AluY SINE Alu -6 305 1 2146 120 16 0 chr17 16098144 16098452 -69340028 - AluSq SINE Alu 0 313 1 2431 72 0 25 chr17 16098505 16098823 -69339657 + AluY SINE Alu 1 310 -1 202 353 8 17 chr17 16099019 16099138 -69339342 + MIR3 SINE MIR 83 200 -8 2230 167 38 40 chr17 16099453 16099879 -69338601 + MSTB1 LTR MaLR 1 425 -7 698 199 58 89 chr17 16099955 16100030 -69338450 + MER5A DNA MER1_type 3 79 -110 2230 85 17 10 chr17 16100030 16100323 -69338157 + AluSg SINE Alu 1 295 -15 698 199 58 89 chr17 16100323 16100438 -69338042 + MER5A DNA MER1_type 79 187 -2 385 228 0 148 chr17 16102176 16102325 -69336155 + MIR SINE MIR 48 174 -88 2332 104 3 0 chr17 16102856 16103163 -69335317 - AluSx SINE Alu -4 308 1 2464 44 10 17 chr17 16103569 16103867 -69334613 + AluY SINE Alu 1 296 -15 277 365 60 18 chr17 16104380 16104547 -69333933 + MIR SINE MIR 20 193 -69 2583 52 0 13 chr17 16104682 16104992 -69333488 + AluY SINE Alu 1 306 -5 2118 94 4 7 chr17 16106382 16106657 -69331823 - AluSg SINE Alu -19 291 18 405 71 0 0 chr17 16106657 16106703 -69331777 - Alu SINE Alu -263 50 2 735 128 8 0 chr17 16106962 16107079 -69331401 - MSTB1 LTR MaLR 0 432 315 698 147 9 0 chr17 16107080 16107196 -69331284 - MSTB1 LTR MaLR -308 118 2 920 307 111 51 chr17 16107196 16107462 -69331018 + L3 LINE CR1 156 404 -1173 2082 118 31 0 chr17 16107462 16107750 -69330730 - AluSx SINE Alu -15 297 1 920 307 111 51 chr17 16107750 16107975 -69330505 + L3 LINE CR1 404 694 -883 2524 58 0 0 chr17 16107975 16108267 -69330213 + AluY SINE Alu 1 292 -19 920 307 111 51 chr17 16108267 16108386 -69330094 + L3 LINE CR1 694 804 -773 294 293 155 60 chr17 16108662 16108997 -69329483 + L3 LINE CR1 1128 1494 -83 2442 57 0 0 chr17 16109081 16109395 -69329085 + AluY SINE Alu 1 314 0 748 277 41 67 chr17 16109401 16109433 -69329047 + MIR SINE MIR 2 33 -229 2844 13 0 0 chr17 16109433 16109737 -69328743 + AluY SINE Alu 1 304 -7 748 277 41 67 chr17 16109737 16109971 -69328509 + MIR SINE MIR 33 261 -1 2406 77 0 3 chr17 16110110 16110408 -69328072 + AluSg SINE Alu 1 297 -13 225 108 0 0 chr17 16111445 16111482 -69326998 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 505 318 131 32 chr17 16111642 16112409 -69326071 + L2 LINE L2 2371 3207 -106 1456 175 15 41 chr17 16112536 16112804 -69325676 + AluJb SINE Alu 28 288 -24 745 196 110 0 chr17 16112835 16112998 -69325482 + Tigger2 DNA MER2_type 2528 2708 -10 1375 232 41 6 chr17 16113102 16113443 -69325037 + L1MD3 LINE L1 7633 7985 -10 2254 97 47 0 chr17 16114089 16114387 -69324093 + AluSx SINE Alu 1 312 0 2298 100 0 7 chr17 16115523 16115822 -69322658 - AluSg SINE Alu -13 297 1 2348 88 0 28 chr17 16115895 16116030 -69322450 + AluSg1 SINE Alu 1 138 -171 2431 77 0 3 chr17 16116030 16116328 -69322152 + AluY SINE Alu 1 297 -14 2523 76 0 3 chr17 16116330 16116644 -69321836 + AluSp SINE Alu 1 313 0 2348 88 0 28 chr17 16116644 16116822 -69321658 + AluSg1 SINE Alu 139 308 -1 354 222 182 0 chr17 16117014 16117113 -69321367 + L1ME4a LINE L1 5990 6106 -15 280 311 11 11 chr17 16117162 16117252 -69321228 - MIR3 SINE MIR -15 193 104 228 359 82 18 chr17 16117631 16117851 -69320629 + L2 LINE L2 2826 3059 -213 280 236 0 42 chr17 16118448 16118520 -69319960 + L3 LINE CR1 1504 1572 -5 7035 66 29 50 chr17 16119015 16120254 -69318226 + SVA Other Other 432 1386 0 2105 71 8 0 chr17 16120273 16120526 -69317954 + AluY SINE Alu 1 255 -56 189 107 0 0 chr17 16120683 16120711 -69317769 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 1677 174 28 0 chr17 16121028 16121310 -69317170 - AluJb SINE Alu -4 308 19 695 241 231 0 chr17 16121943 16122155 -69316325 - MIR SINE MIR 0 262 2 203 88 29 0 chr17 16123730 16123764 -69314716 + (TGGA)n Simple_repeat Simple_repeat 2 36 0 2170 141 0 3 chr17 16123829 16124126 -69314354 - AluSx SINE Alu -16 296 1 3059 118 45 19 chr17 16125092 16125689 -69312791 + MER4B LTR ERV1 1 779 0 469 235 154 0 chr17 16125885 16126034 -69312446 - MER21B LTR ERV1 -11 852 681 * 1667 190 18 70 chr17 16126028 16126166 -69312314 - MER21B LTR ERV1 -423 440 296 2257 109 0 13 chr17 16126166 16126469 -69312011 - AluSx SINE Alu -10 302 4 1667 190 18 70 chr17 16126469 16126772 -69311708 - MER21B LTR ERV1 -567 296 22 2277 116 0 0 chr17 16126777 16127096 -69311384 - AluSg SINE Alu 0 319 1 386 279 19 62 chr17 16127112 16127273 -69311207 + MIR SINE MIR 102 255 -7 180 111 0 0 chr17 16127542 16127569 -69310911 + (A)n Simple_repeat Simple_repeat 1 27 0 196 302 83 52 chr17 16128463 16128559 -69309921 + MIR SINE MIR 37 135 -127 2382 79 7 23 chr17 16128949 16129254 -69309226 - AluSx SINE Alu -12 300 1 321 26 0 0 chr17 16129796 16129834 -69308646 + (CA)n Simple_repeat Simple_repeat 1 38 0 2398 52 0 7 chr17 16129926 16130260 -69308220 + AluY SINE Alu 1 311 0 2200 105 3 0 chr17 16131273 16131568 -69306912 - AluY SINE Alu -15 296 1 207 190 17 35 chr17 16132817 16132875 -69305605 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 2339 79 6 41 chr17 16134119 16134435 -69304045 - AluSg SINE Alu -1 309 5 2305 98 10 0 chr17 16134438 16134743 -69303737 - AluSx SINE Alu -4 308 1 199 237 102 0 chr17 16134847 16134906 -69303574 - L3 LINE CR1 -936 641 577 2170 153 31 26 chr17 16134944 16135361 -69303119 + MSTB1 LTR MaLR 1 419 -13 2059 141 91 16 chr17 16135378 16135741 -69302739 - MLT1B LTR MaLR 0 390 1 3273 80 19 14 chr17 16136418 16136903 -69301577 + LTR15 LTR ERV1 1 487 -6 2518 55 0 0 chr17 16137562 16137852 -69300628 - AluY SINE Alu -17 294 5 408 306 105 15 chr17 16138346 16138689 -69299791 + L2 LINE L2 309 682 -2632 1757 149 6 78 chr17 16138713 16139048 -69299432 - AluJb SINE Alu -1 311 1 252 171 0 0 chr17 16139175 16139216 -69299264 - FAM SINE Alu -13 166 126 1050 181 0 0 chr17 16139217 16139383 -69299097 - FRAM SINE Alu 0 166 1 1918 136 12 6 chr17 16139384 16139707 -69298773 - L1MB3 LINE L1 -41 6142 5818 2707 52 0 0 chr17 16142599 16142908 -69295572 + AluY SINE Alu 1 309 -2 400 250 78 23 chr17 16143054 16143182 -69295298 + MIR SINE MIR 32 166 -96 303 359 0 0 chr17 16144729 16144821 -69293659 - MIR SINE MIR -122 140 49 181 294 64 55 chr17 16145262 16145371 -69293109 - L2 LINE L2 -1 3312 3203 373 313 123 6 chr17 16145453 16145632 -69292848 + MLT1L LTR MaLR 363 562 -53 606 114 0 0 chr17 16146406 16146485 -69291995 + AluS SINE Alu 5 83 -229 2326 103 10 0 chr17 16146735 16147036 -69291444 + AluSx SINE Alu 1 304 -8 2316 104 10 0 chr17 16147213 16147521 -69290959 + AluY SINE Alu 1 311 0 1192 324 77 26 chr17 16147568 16148219 -69290261 + L2 LINE L2 2019 2702 -612 829 178 0 0 chr17 16148231 16148360 -69290120 - FLAM_C SINE Alu 0 133 5 355 259 24 41 chr17 16148375 16148395 -69290085 - L1MA10 LINE L1 -2 6332 6313 1736 221 14 18 chr17 16148395 16148835 -69289645 - L1ME2 LINE L1 -9 6155 5718 355 256 41 25 chr17 16148835 16148956 -69289524 - L1MEc LINE L1 -3846 2369 2247 1680 215 87 34 chr17 16149078 16149525 -69288955 + Charlie1a DNA MER1_type 1 471 -984 679 150 39 20 chr17 16149767 16149920 -69288560 - L1MC3 LINE L1 -97 7688 7533 891 295 23 9 chr17 16150043 16150385 -69288095 - L1MEc LINE L1 -6014 382 36 484 306 126 22 chr17 16150400 16150622 -69287858 + L2 LINE L2 2702 2946 -368 387 264 187 31 chr17 16150856 16151436 -69287044 + L1MC4a LINE L1 5224 5568 -756 1203 165 9 5 chr17 16151760 16151972 -69286508 - MER20 DNA MER1_type -5 214 2 276 360 40 0 chr17 16152533 16152633 -69285847 + MIR3 SINE MIR 94 197 -11 1592 172 18 14 chr17 16154435 16154735 -69283745 + AluJo SINE Alu 2 302 0 2449 72 0 0 chr17 16156072 16156363 -69282117 + AluSc SINE Alu 1 291 -18 617 221 116 88 chr17 16156424 16156777 -69281703 + LTR52 LTR ERVL 1 363 -58 504 193 15 7 chr17 16157714 16157849 -69280631 + (TA)n Simple_repeat Simple_repeat 1 136 0 590 290 34 85 chr17 16157918 16158076 -69280404 + L2 LINE L2 2174 2339 -975 984 156 177 0 chr17 16158076 16158262 -69280218 - MER20 DNA MER1_type 0 219 1 590 290 34 85 chr17 16158262 16158407 -69280073 + L2 LINE L2 2339 2453 -861 2538 68 0 3 chr17 16158407 16158717 -69279763 - AluY SINE Alu -2 309 1 590 290 34 85 chr17 16158717 16158822 -69279658 + L2 LINE L2 2453 2562 -752 2478 70 0 7 chr17 16159918 16160219 -69278261 + AluY SINE Alu 1 299 -12 1020 233 137 32 chr17 16160334 16160707 -69277773 + MLT1J1 LTR MaLR 15 426 -20 2094 100 20 23 chr17 16160861 16161161 -69277319 - AluSx SINE Alu -13 299 1 2662 45 0 0 chr17 16161638 16161946 -69276534 + AluY SINE Alu 1 308 -3 225 286 29 14 chr17 16163226 16163296 -69275184 - MIR3 SINE MIR -17 191 121 342 193 80 23 chr17 16163469 16163557 -69274923 + L2 LINE L2 3180 3272 0 508 261 182 20 chr17 16163939 16164142 -69274338 + MIR SINE MIR 22 257 -5 242 296 141 3 chr17 16165414 16165541 -69272939 + MIR3 SINE MIR 4 144 -78 405 247 69 23 chr17 16165560 16165734 -69272746 - MIR SINE MIR 0 262 81 283 216 62 21 chr17 16166288 16166385 -69272095 + AluYb8 SINE Alu 208 308 0 2247 77 7 14 chr17 16166424 16166721 -69271759 - AluSx SINE Alu -17 295 1 5359 232 36 28 chr17 16166721 16166961 -69271519 - L1M2c LINE L1 -4824 1965 1728 2340 67 0 54 chr17 16166961 16167275 -69271205 - AluY SINE Alu -14 297 1 5359 232 36 28 chr17 16167275 16167380 -69271100 - L1M2c LINE L1 -5061 1728 1625 559 13 26 13 chr17 16167380 16167456 -69271024 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 1874 125 18 14 chr17 16167457 16167736 -69270744 - AluSx SINE Alu -32 280 1 5359 232 36 28 chr17 16167736 16167928 -69270552 - L1M2c LINE L1 -5164 1625 1436 2119 124 0 0 chr17 16167928 16168218 -69270262 + AluSg SINE Alu 1 290 -20 5359 232 36 28 chr17 16168218 16169931 -69268549 - L1M2c LINE L1 -5353 1436 14 775 309 121 62 chr17 16169998 16170154 -69268326 - L1MDa LINE L1 -2196 4344 4199 2320 102 7 0 chr17 16170154 16170458 -69268022 + AluSx SINE Alu 1 306 -6 775 309 121 62 chr17 16170458 16170469 -69268011 - L1MDa LINE L1 -2341 4199 4190 2239 94 0 29 chr17 16170469 16170776 -69267704 + AluY SINE Alu 1 298 -13 2042 52 135 0 chr17 16170778 16171045 -69267435 + AluY SINE Alu 1 303 -8 775 309 121 62 chr17 16171045 16171588 -69266892 - L1MDa LINE L1 -2350 4190 3540 2189 114 0 0 chr17 16171588 16171869 -69266611 - AluSx SINE Alu -31 281 1 775 309 121 62 chr17 16171869 16172253 -69266227 - L1MDa LINE L1 -3000 3540 3180 1147 181 48 48 chr17 16172259 16172519 -69265961 + MER33 DNA MER1_type 1 263 -2322 2541 50 0 3 chr17 16172519 16172821 -69265659 + AluY SINE Alu 1 301 -10 1147 181 48 48 chr17 16172821 16172870 -69265610 + MER33 DNA MER1_type 262 310 -14 273 290 43 38 chr17 16172927 16173151 -69265329 - L1MDa LINE L1 -3404 3136 2911 3465 219 74 56 chr17 16173203 16175123 -69263357 + L1MDb LINE L1 16 2004 -4402 2365 98 0 0 chr17 16175166 16175461 -69263019 - AluSg SINE Alu -15 295 1 23 0 0 0 chr17 16175461 16175484 -69262996 + AT_rich Low_complexity Low_complexity 1 23 0 2425 87 0 0 chr17 16175627 16175927 -69262553 - AluSc SINE Alu -9 300 1 321 239 68 68 chr17 16175938 16176101 -69262379 - L1MDa LINE L1 -3937 2603 2441 2206 115 10 0 chr17 16176138 16176442 -69262038 - AluSx SINE Alu -5 307 1 2542 84 0 0 chr17 16176615 16176926 -69261554 - AluSx SINE Alu -1 311 1 2068 109 0 82 chr17 16176926 16177103 -69261377 - AluSx SINE Alu -16 296 154 2200 119 13 13 chr17 16177103 16177415 -69261065 - AluSx SINE Alu 0 312 1 2068 109 0 82 chr17 16177415 16177558 -69260922 - AluSx SINE Alu -158 154 1 4271 134 54 0 chr17 16177559 16178223 -69260257 + L1MA4A LINE L1 5594 6293 -10 190 304 0 0 chr17 16178266 16178322 -69260158 - L2 LINE L2 0 3313 3258 2555 56 3 0 chr17 16179030 16179332 -69259148 - AluY SINE Alu -8 303 1 356 313 154 5 chr17 16179488 16179696 -69258784 - HAL1 LINE L1 -1013 1494 1256 1389 240 105 12 chr17 16180160 16180646 -69257834 - MLT1E LTR MaLR -3 590 21 519 338 84 26 chr17 16180692 16181035 -69257445 - L2 LINE L2 -561 2753 2391 260 264 83 58 chr17 16182718 16182839 -69255641 - MER5A DNA MER1_type -22 167 44 2085 131 3 0 chr17 16183823 16184121 -69254359 + AluY SINE Alu 1 299 -12 2258 101 13 0 chr17 16184215 16184513 -69253967 + AluSx SINE Alu 1 302 -10 537 299 118 88 chr17 16184719 16185244 -69253236 - MLT1K LTR MaLR -2 586 46 28 0 0 0 chr17 16186034 16186062 -69252418 + AT_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr17 16186887 16186920 -69251560 + GC_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 16186937 16186959 -69251521 + GC_rich Low_complexity Low_complexity 1 22 0 611 233 55 25 chr17 16187122 16187324 -69251156 - L1MC4a LINE L1 -2 7806 7599 337 277 153 36 chr17 16187327 16187601 -69250879 - L1M4 LINE L1 -2997 3149 2844 314 339 62 0 chr17 16187868 16187998 -69250482 - HAL1b LINE L1 -620 728 591 256 136 51 51 chr17 16188668 16188727 -69249753 - MLT1K LTR MaLR -8 580 522 603 270 176 30 chr17 16188797 16189030 -69249450 - MLT1K LTR MaLR -176 412 146 2440 56 20 7 chr17 16189141 16189443 -69249037 + AluY SINE Alu 1 306 -5 901 133 0 22 chr17 16189852 16189987 -69248493 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 16189990 16190015 -69248465 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr17 16190322 16190346 -69248134 + AT_rich Low_complexity Low_complexity 1 24 0 2281 261 52 3 chr17 16190487 16191135 -69247345 - L1ME3A LINE L1 -51 6119 5440 2333 108 0 6 chr17 16191190 16191504 -69246976 + AluSx SINE Alu 1 312 0 349 247 55 55 chr17 16191650 16191796 -69246684 - L1ME3A LINE L1 -271 5899 5754 485 237 78 63 chr17 16191852 16192229 -69246251 - L1ME3A LINE L1 -517 5653 5189 362 342 107 4 chr17 16192371 16192596 -69245884 - L1ME3A LINE L1 -1158 4988 4741 2239 88 7 7 chr17 16192900 16193194 -69245286 - AluSg SINE Alu -16 294 1 360 287 33 16 chr17 16193448 16193568 -69244912 - MER102b DNA MER1_type -2 339 218 683 255 60 0 chr17 16193568 16193752 -69244728 - MER58A DNA MER1_type 0 224 30 2422 74 0 3 chr17 16193856 16194153 -69244327 - AluY SINE Alu -14 297 2 635 339 125 34 chr17 16194269 16194923 -69243557 + L2 LINE L2 2165 2878 -436 4913 201 91 26 chr17 16194926 16195091 -69243389 - Charlie1 DNA MER1_type -1 2760 2607 829 180 0 0 chr17 16195091 16195219 -69243261 + FLAM_C SINE Alu 1 128 -5 4913 201 91 26 chr17 16195219 16196397 -69242083 - Charlie1 DNA MER1_type -154 2607 5 636 257 33 71 chr17 16196449 16196659 -69241821 - MIR SINE MIR -5 257 56 288 254 15 0 chr17 16196713 16196780 -69241700 + L2 LINE L2 3237 3304 -9 893 294 43 29 chr17 16197116 16197531 -69240949 - L1MC4a LINE L1 -1741 6067 5647 2429 82 0 7 chr17 16199913 16200216 -69238264 - AluY SINE Alu -9 302 2 2382 158 80 5 chr17 16200717 16201115 -69237365 - MSTA LTR MaLR 0 428 1 216 97 0 0 chr17 16201121 16201152 -69237328 + (A)n Simple_repeat Simple_repeat 1 31 0 643 279 6 36 chr17 16201211 16201376 -69237104 + MER58A DNA MER1_type 1 160 0 1698 169 55 23 chr17 16201389 16201696 -69236784 - MLT1A1 LTR MaLR -30 335 19 377 194 0 14 chr17 16201705 16201777 -69236703 + MER58A DNA MER1_type 154 224 0 492 261 124 56 chr17 16202005 16202224 -69236256 + MIR SINE MIR 10 236 -26 2408 89 3 0 chr17 16203098 16203400 -69235080 + AluSp SINE Alu 1 303 -10 2155 77 70 0 chr17 16203620 16203892 -69234588 + AluSc SINE Alu 1 291 -18 539 298 80 46 chr17 16204333 16204682 -69233798 - MLT1K LTR MaLR -153 435 75 2464 75 3 7 chr17 16204851 16205156 -69233324 + AluY SINE Alu 1 304 -7 2608 63 0 0 chr17 16205558 16205861 -69232619 - AluY SINE Alu -8 303 1 311 238 24 24 chr17 16205877 16205961 -69232519 - MLT1K LTR MaLR -92 496 413 459 0 0 0 chr17 16206397 16206448 -69232032 + (TA)n Simple_repeat Simple_repeat 1 51 0 23 68 0 0 chr17 16206604 16206648 -69231832 + AT_rich Low_complexity Low_complexity 1 44 0 3177 176 16 13 chr17 16206901 16207457 -69231023 - MER68 LTR ERV1 -4 558 1 3796 243 66 24 chr17 16207653 16208943 -69229537 + L1MC4 LINE L1 6694 8037 -5 2141 100 0 0 chr17 16209107 16209420 -69229060 - AluY SINE Alu 0 313 1 2059 65 34 74 chr17 16209447 16209770 -69228710 - AluY SINE Alu -1 310 1 1224 79 12 12 chr17 16209940 16210105 -69228375 - AluSp SINE Alu -7 306 142 2013 114 0 14 chr17 16210105 16210386 -69228094 - AluSq SINE Alu -36 277 1 430 298 73 29 chr17 16210391 16210596 -69227884 + L1ME3A LINE L1 5360 5573 -589 944 122 47 122 chr17 16210602 16210644 -69227836 - L1MA8 LINE L1 -7 6284 6240 186 43 0 0 chr17 16210644 16210667 -69227813 + (CA)n Simple_repeat Simple_repeat 2 24 0 944 122 47 122 chr17 16210667 16210902 -69227578 - L1MA8 LINE L1 -51 6240 6028 1154 262 62 62 chr17 16210921 16211146 -69227334 + L1ME3A LINE L1 5600 5824 -346 2421 80 0 7 chr17 16211146 16211447 -69227033 + AluY SINE Alu 1 299 -12 1154 262 62 62 chr17 16211447 16211782 -69226698 + L1ME3A LINE L1 5823 6160 -10 578 242 96 19 chr17 16212370 16212656 -69225824 - MLT2F LTR ERVL -86 577 202 248 0 31 0 chr17 16212656 16212688 -69225792 + (TG)n Simple_repeat Simple_repeat 1 33 0 214 329 14 0 chr17 16214068 16214138 -69224342 + (CACG)n Simple_repeat Simple_repeat 2 72 0 242 145 16 65 chr17 16214438 16214500 -69223980 - SN5 Other centromeric -77 378 320 265 195 0 23 chr17 16214949 16215036 -69223444 - HSAT5 Satellite Satellite -1 85 1 298 230 0 29 chr17 16215067 16215168 -69223312 - HSAT5 Satellite Satellite -1 98 1 258 165 10 134 chr17 16215930 16216027 -69222453 - SN5 Other centromeric -77 378 294 989 321 38 21 chr17 16221162 16221829 -69216651 + L1MC3 LINE L1 5479 6156 -1629 192 158 0 0 chr17 16225589 16225627 -69212853 + CT-rich Low_complexity Low_complexity 2 39 0 2227 83 10 3 chr17 16225663 16225951 -69212529 + AluY SINE Alu 5 294 -17 3424 161 17 3 chr17 16227583 16228246 -69210234 - L1 LINE L1 -1306 4840 4169 581 164 24 212 chr17 16228266 16228431 -69210049 - MLT1E2 LTR MaLR -189 465 284 340 217 61 75 chr17 16228606 16228772 -69209708 - MLT1-int LTR MaLR -69 1666 1140 2870 102 64 115 chr17 16228781 16229406 -69209074 - LTR14B LTR ERVK 0 608 16 2013 100 79 0 chr17 16229477 16229757 -69208723 + AluSp SINE Alu 1 302 -11 345 47 0 0 chr17 16229757 16229800 -69208680 + (TA)n Simple_repeat Simple_repeat 1 43 0 507 118 97 0 chr17 16230593 16230686 -69207794 - AluSp/q SINE Alu 0 313 212 244 60 113 151 chr17 16231893 16232078 -69206402 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 28 0 0 0 chr17 16233177 16233205 -69205275 + AT_rich Low_complexity Low_complexity 1 28 0 789 212 20 6 chr17 16233304 16233606 -69204874 - MLT1A2 LTR MaLR 0 374 1 602 174 87 31 chr17 16234140 16234301 -69204179 + MER3 DNA MER1_type 19 188 -21 2272 109 23 0 chr17 16234504 16234806 -69203674 + AluSg SINE Alu 1 309 -1 1153 92 7 0 chr17 16234890 16235042 -69203438 - AluSg/x SINE Alu -1 309 157 1670 198 0 3 chr17 16235123 16235421 -69203059 - AluJb SINE Alu -15 297 1 22 70 0 0 chr17 16235664 16235707 -69202773 + AT_rich Low_complexity Low_complexity 1 43 0 2265 101 7 0 chr17 16235713 16236009 -69202471 - AluSx SINE Alu -14 298 1 333 47 0 0 chr17 16236278 16236321 -69202159 + (CA)n Simple_repeat Simple_repeat 2 44 0 1157 127 0 0 chr17 16237038 16237196 -69201284 + AluSp SINE Alu 138 295 -18 218 56 28 0 chr17 16237854 16237890 -69200590 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1577 95 5 9 chr17 16238119 16238330 -69200150 - AluSq SINE Alu -17 296 87 295 305 130 25 chr17 16238696 16238896 -69199584 - MER69 DNA AcHobo -1989 537 317 364 285 28 39 chr17 16238931 16239110 -69199370 - MER69 DNA AcHobo -2319 207 31 218 286 95 0 chr17 16239822 16239885 -69198595 + L2 LINE L2 3148 3216 -56 315 250 143 0 chr17 16239997 16240081 -69198399 - MIR SINE MIR -117 145 50 316 228 39 47 chr17 16240683 16240704 -69197776 + L1MC4 LINE L1 7913 7933 -109 2056 157 0 7 chr17 16240704 16241010 -69197470 + AluSx SINE Alu 1 304 -8 316 228 39 47 chr17 16241010 16241115 -69197365 + L1MC4 LINE L1 7933 8038 -4 411 302 86 56 chr17 16241281 16241619 -69196861 - L1ME4a LINE L1 -224 5897 5550 1618 131 4 0 chr17 16241663 16241892 -69196588 + AluSq SINE Alu 68 297 -16 675 269 105 19 chr17 16241964 16242335 -69196145 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 16242418 16242441 -69196039 + AT_rich Low_complexity Low_complexity 1 23 0 1389 48 0 4 chr17 16242934 16243144 -69195336 - AluY SINE Alu -11 300 1 207 68 23 45 chr17 16243229 16243273 -69195207 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 462 222 68 12 chr17 16243334 16243496 -69194984 - L1ME4a LINE L1 -1 6120 5950 359 226 97 86 chr17 16243601 16243787 -69194693 - L1M4c LINE L1 -2984 3660 3473 4062 132 20 11 chr17 16244274 16244931 -69193549 + THE1C-int LTR MaLR 918 1580 0 1958 154 52 22 chr17 16244931 16245295 -69193185 + THE1C LTR MaLR 1 375 0 1554 213 0 19 chr17 16245621 16245936 -69192544 - AluJo SINE Alu -1 311 3 290 146 0 0 chr17 16246757 16246798 -69191682 - Alu SINE Alu -254 45 5 2924 212 74 37 chr17 16246812 16248484 -69189996 - L1M4c LINE L1 -4738 1908 14 980 251 84 38 chr17 16248826 16249276 -69189204 - MER20B DNA MER1_type -1 782 312 1708 255 49 19 chr17 16249334 16249864 -69188616 - MER90 LTR ERV1 0 614 69 390 269 42 17 chr17 16249895 16250014 -69188466 - MER20B DNA MER1_type -542 241 120 268 200 80 40 chr17 16250016 16250091 -69188389 - MLT1J2 LTR MaLR -306 144 67 256 237 99 84 chr17 16250125 16250256 -69188224 + MIR SINE MIR 75 207 -55 306 0 0 0 chr17 16250338 16250372 -69188108 + (CA)n Simple_repeat Simple_repeat 2 35 0 2268 113 3 0 chr17 16250446 16250746 -69187734 + AluSp SINE Alu 1 301 -12 1290 243 70 14 chr17 16250881 16251239 -69187241 + MLT1G1 LTR MaLR 1 378 -217 402 219 86 0 chr17 16251281 16251386 -69187094 + MLT1G1 LTR MaLR 465 578 -12 981 277 126 52 chr17 16251563 16251670 -69186810 - MLT1J LTR MaLR 0 511 413 2163 123 7 3 chr17 16251670 16251962 -69186518 + AluSq SINE Alu 2 294 -19 981 277 126 52 chr17 16251962 16252330 -69186150 - MLT1J LTR MaLR -98 413 1 2440 79 0 3 chr17 16254068 16254373 -69184107 + AluY SINE Alu 1 304 -7 301 349 9 28 chr17 16254723 16254832 -69183648 + MIR3 SINE MIR 15 121 -87 839 225 56 11 chr17 16254832 16255010 -69183470 + MER5A DNA MER1_type 4 189 0 2504 37 14 0 chr17 16255085 16255380 -69183100 + AluY SINE Alu 1 299 -12 2271 110 0 0 chr17 16255571 16255870 -69182610 + AluY SINE Alu 1 299 -12 410 156 0 52 chr17 16256521 16256598 -69181882 - L2 LINE L2 -2 3270 3198 1220 184 82 0 chr17 16257053 16257260 -69181220 - MER58A DNA MER1_type 0 224 1 2428 72 3 3 chr17 16258226 16258530 -69179950 - AluY SINE Alu -2 309 6 1156 72 0 0 chr17 16258540 16258679 -69179801 + MER85 DNA T2_type 1 139 0 253 290 172 32 chr17 16259346 16259567 -69178913 + L2 LINE L2 3038 3289 -24 332 280 88 29 chr17 16259575 16259814 -69178666 + HAL1b LINE L1 62 314 -1034 533 248 78 0 chr17 16259869 16260022 -69178458 + HAL1b LINE L1 401 565 -783 379 258 69 73 chr17 16260053 16260286 -69178194 + HAL1b LINE L1 666 897 -451 826 231 152 18 chr17 16260796 16261294 -69177186 + MLT1F LTR MaLR 2 542 0 401 321 179 4 chr17 16263383 16263645 -69174835 - L2 LINE L2 -1 3312 3005 829 185 55 120 chr17 16263665 16263914 -69174566 + Charlie4 DNA MER1_type 1 230 -278 2306 103 7 0 chr17 16263914 16264224 -69174256 - AluSp SINE Alu -1 312 1 829 185 55 120 chr17 16264224 16264266 -69174214 + Charlie4 DNA MER1_type 230 273 -235 * 1338 176 125 27 chr17 16264263 16264473 -69174007 + Charlie4a DNA MER1_type 104 292 -1669 1627 140 110 16 chr17 16264473 16264781 -69173699 - MER44D DNA MER2_type -1 608 2 1338 176 125 27 chr17 16264781 16264939 -69173541 + Charlie4a DNA MER1_type 292 508 0 249 326 90 28 chr17 16265030 16265208 -69173272 - L2 LINE L2 -801 2513 2325 1500 154 0 5 chr17 16265232 16265453 -69173027 + AluSg/x SINE Alu 75 294 -16 271 373 51 28 chr17 16265455 16265710 -69172770 - L2 LINE L2 -978 2336 2076 392 313 130 28 chr17 16265769 16266232 -69172248 - L1M4 LINE L1 -2966 3180 2671 2040 71 67 32 chr17 16266882 16267165 -69171315 - AluY SINE Alu -18 293 1 1603 73 60 18 chr17 16267328 16267546 -69170934 - MER30 DNA MER1_type 0 230 4 2392 81 0 7 chr17 16268159 16268457 -69170023 + AluSp SINE Alu 1 296 -17 194 156 22 0 chr17 16268675 16268720 -69169760 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 1185 198 9 22 chr17 16268774 16268996 -69169484 - MER20 DNA MER1_type 0 219 1 27 0 0 0 chr17 16269404 16269431 -69169049 + AT_rich Low_complexity Low_complexity 1 27 0 2557 71 0 0 chr17 16269988 16270296 -69168184 - AluY SINE Alu -3 308 1 1793 150 14 10 chr17 16270305 16270598 -69167882 - L1MB8 LINE L1 0 6178 5885 207 307 21 118 chr17 16271537 16271676 -69166804 + L2 LINE L2 1516 1616 -1698 2236 113 3 0 chr17 16271676 16271976 -69166504 - AluSx SINE Alu -11 301 1 207 307 21 118 chr17 16271976 16272116 -69166364 + L2 LINE L2 1616 1768 -1546 2036 103 31 7 chr17 16272123 16272413 -69166067 - AluY SINE Alu -14 297 1 339 350 92 25 chr17 16272508 16272834 -69165646 + L2 LINE L2 2628 2975 -339 1948 143 0 26 chr17 16273050 16273358 -69165122 - AluSx SINE Alu -12 300 1 356 236 8 134 chr17 16273759 16273886 -69164594 - MER5B DNA MER1_type -1 177 67 335 272 134 18 chr17 16273943 16274136 -69164344 + L2 LINE L2 2644 2866 -406 1506 208 84 45 chr17 16274136 16274563 -69163917 + MLT1D LTR MaLR 1 444 -61 289 274 8 94 chr17 16274607 16274626 -69163854 + L2 LINE L2 2871 2890 -423 1235 175 156 0 chr17 16274626 16274883 -69163597 - AluJo SINE Alu -13 299 3 289 274 8 94 chr17 16274883 16274980 -69163500 + L2 LINE L2 2890 2977 -336 370 237 36 45 chr17 16275008 16275202 -69163278 - L2 LINE L2 -2 3311 2337 1018 230 35 83 chr17 16275243 16275591 -69162889 - L2 LINE L2 -552 2762 2432 2296 271 115 38 chr17 16275592 16275820 -69162660 - L2 LINE L2 -1154 2160 1951 2273 83 3 20 chr17 16275820 16276122 -69162358 - AluSc SINE Alu -12 297 1 2296 271 115 38 chr17 16276122 16276314 -69162166 - L2 LINE L2 -1363 1951 1775 2306 67 37 0 chr17 16276314 16276613 -69161867 - AluY SINE Alu -1 310 1 2296 271 115 38 chr17 16276613 16277076 -69161404 - L2 LINE L2 -1539 1775 1349 2289 85 0 0 chr17 16277076 16277426 -69161054 + AluSq SINE Alu 1 350 0 2296 271 115 38 chr17 16277426 16277487 -69160993 - L2 LINE L2 -1965 1349 1294 3952 96 35 11 chr17 16277487 16277981 -69160499 + MER41A LTR ERV1 1 511 -43 2223 78 14 14 chr17 16277981 16278276 -69160204 - AluSc SINE Alu -14 295 1 3952 96 35 11 chr17 16278276 16278322 -69160158 + MER41A LTR ERV1 511 554 0 2296 271 115 38 chr17 16278322 16278338 -69160142 - L2 LINE L2 -2020 1294 1122 310 265 20 20 chr17 16278540 16278642 -69159838 + L2 LINE L2 3211 3312 -1 435 181 0 0 chr17 16279362 16279478 -69159002 + (CGGGG)n Simple_repeat Simple_repeat 4 119 0 22 56 0 0 chr17 16279660 16279696 -69158784 + AT_rich Low_complexity Low_complexity 1 36 0 212 242 81 0 chr17 16279924 16279986 -69158494 + MIR SINE MIR 106 172 -90 963 131 7 0 chr17 16280505 16280642 -69157838 - AluSq/x SINE Alu -174 138 1 2479 64 0 13 chr17 16282311 16282623 -69155857 - AluY SINE Alu -3 308 1 2386 70 0 3 chr17 16282749 16283047 -69155433 + AluY SINE Alu 1 297 -14 325 257 47 27 chr17 16283162 16283310 -69155170 - L1MC4a LINE L1 -1925 5883 5733 813 171 0 0 chr17 16283344 16283467 -69155013 + FRAM SINE Alu 38 160 -16 394 337 57 50 chr17 16283983 16284262 -69154218 - L2 LINE L2 -5 3267 2987 2324 132 21 13 chr17 16284821 16285199 -69153281 - L1P5 LINE L1 -424 5732 5352 1427 187 99 0 chr17 16285210 16285494 -69152986 - AluJb SINE Alu 0 312 1 910 122 0 0 chr17 16285501 16285624 -69152856 - FLAM_C SINE Alu -10 133 11 562 126 41 84 chr17 16285625 16285766 -69152714 - L1 LINE L1 -780 5366 5232 289 185 19 0 chr17 16285790 16285844 -69152636 - L2 LINE L2 -68 3245 3191 180 111 0 0 chr17 16285877 16285904 -69152576 + (TGGA)n Simple_repeat Simple_repeat 4 30 0 792 237 58 10 chr17 16286326 16286533 -69151947 + L1ME1 LINE L1 4112 4328 -1818 3118 206 76 44 chr17 16286580 16286823 -69151657 + L1ME1 LINE L1 5073 5307 -859 1760 164 20 10 chr17 16286823 16287116 -69151364 + AluJo SINE Alu 1 296 -16 3118 206 76 44 chr17 16287116 16287917 -69150563 + L1ME1 LINE L1 5307 6151 -15 521 272 58 29 chr17 16287964 16288137 -69150343 + MIR SINE MIR 6 183 -79 301 331 206 26 chr17 16288212 16288791 -69149689 - L2 LINE L2 -24 3248 2561 186 317 195 0 chr17 16291096 16291260 -69147220 + L2 LINE L2 1599 1794 -1520 180 164 18 91 chr17 16292161 16292216 -69146264 + L2 LINE L2 3222 3272 0 256 296 20 51 chr17 16293748 16293846 -69144634 - L2 LINE L2 -221 3051 2957 21 0 0 0 chr17 16294760 16294781 -69143699 + AT_rich Low_complexity Low_complexity 1 21 0 458 232 12 0 chr17 16294795 16294877 -69143603 + 7SLRNA srpRNA srpRNA 2 84 -236 243 0 0 0 chr17 16294906 16294933 -69143547 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 21 36 0 0 chr17 16295031 16295059 -69143421 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 16296253 16296288 -69142192 + AT_rich Low_complexity Low_complexity 1 35 0 283 264 240 0 chr17 16296486 16296607 -69141873 + L2 LINE L2 3123 3272 0 510 219 110 55 chr17 16296619 16296783 -69141697 - MIR SINE MIR -28 234 62 401 293 9 17 chr17 16296873 16296989 -69141491 - MIR SINE MIR -69 139 25 346 103 138 0 chr17 16297522 16297580 -69140900 - MER5A DNA MER1_type -120 69 4 21 82 0 0 chr17 16297771 16297820 -69140660 + AT_rich Low_complexity Low_complexity 1 49 0 496 297 135 32 chr17 16298778 16299269 -69139211 + L2 LINE L2 2652 3200 -72 209 184 71 40 chr17 16299535 16299608 -69138872 + MIR SINE MIR 96 146 -62 1027 279 33 42 chr17 16299698 16300156 -69138324 + L1ME4a LINE L1 5486 5939 -182 189 107 0 0 chr17 16300719 16300747 -69137733 + (T)n Simple_repeat Simple_repeat 1 28 0 9145 100 21 25 chr17 16301050 16302355 -69136125 - HSMAR2 DNA Mariner -1 1301 1 234 271 258 19 chr17 16304233 16304388 -69134092 - MIR SINE MIR -63 199 8 571 297 83 18 chr17 16305795 16306024 -69132456 + MIR SINE MIR 2 245 -17 2195 106 7 0 chr17 16307054 16307347 -69131133 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 16307452 16307480 -69131000 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 16308055 16308077 -69130403 + (T)n Simple_repeat Simple_repeat 1 22 0 2310 89 0 3 chr17 16308580 16308873 -69129607 + AluSg1 SINE Alu 1 292 -17 2164 136 0 0 chr17 16309385 16309686 -69128794 - AluSq SINE Alu -12 301 1 5818 50 1 3 chr17 16360043 16360761 -69077719 - L1PA6 LINE L1 -6 6148 5432 944 206 0 0 chr17 16361909 16362074 -69076406 - FRAM SINE Alu 0 166 2 212 357 57 0 chr17 16362246 16362316 -69076164 - L2 LINE L2 -16 3256 3183 2249 117 3 0 chr17 16362954 16363253 -69075227 + AluSx SINE Alu 1 300 -12 210 37 0 0 chr17 16363254 16363281 -69075199 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 261 14 14 chr17 16363881 16363894 -69074586 + A-rich Low_complexity Low_complexity 3 15 -129 656 205 31 0 chr17 16363894 16364021 -69074459 + FLAM_C SINE Alu 1 131 -2 239 261 14 14 chr17 16364021 16364037 -69074443 + A-rich Low_complexity Low_complexity 15 30 -114 2122 151 0 0 chr17 16364037 16364348 -69074132 + AluSx SINE Alu 1 311 -1 239 261 14 14 chr17 16364348 16364459 -69074021 + A-rich Low_complexity Low_complexity 29 144 0 180 0 0 0 chr17 16365342 16365362 -69073118 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 215 298 32 21 chr17 16365622 16365716 -69072764 - L3 LINE CR1 -170 1407 1313 2150 114 3 3 chr17 16365860 16366157 -69072323 - AluSq SINE Alu -16 297 1 23 78 0 0 chr17 16366393 16366444 -69072036 + AT_rich Low_complexity Low_complexity 1 51 0 2461 82 3 0 chr17 16367014 16367317 -69071163 + AluSp SINE Alu 1 304 -9 2151 90 31 7 chr17 16367723 16368013 -69070467 - AluSx SINE Alu -15 297 1 293 195 24 37 chr17 16368047 16368129 -69070351 + MIR SINE MIR 128 208 -54 361 281 21 10 chr17 16368179 16368275 -69070205 + L2 LINE L2 3213 3309 -4 2027 132 3 3 chr17 16368391 16368680 -69069800 + AluSx SINE Alu 1 289 -23 283 95 48 0 chr17 16368764 16368806 -69069674 + MER57A LTR ERV1 295 338 -65 29 0 0 0 chr17 16368807 16368836 -69069644 + AT_rich Low_complexity Low_complexity 1 29 0 372 22 0 0 chr17 16369099 16369144 -69069336 + (CA)n Simple_repeat Simple_repeat 1 45 0 2225 90 3 22 chr17 16369155 16369467 -69069013 - AluSq SINE Alu -7 306 1 24 32 0 0 chr17 16369509 16369540 -69068940 + AT_rich Low_complexity Low_complexity 1 31 0 218 295 85 62 chr17 16369733 16369862 -69068618 - MIR SINE MIR -19 243 112 21 0 0 0 chr17 16369960 16369981 -69068499 + AT_rich Low_complexity Low_complexity 1 21 0 552 270 95 22 chr17 16369998 16370313 -69068167 + L1MEd LINE L1 1193 1530 -4886 386 273 156 60 chr17 16370314 16370739 -69067741 + L1MEd LINE L1 1381 1986 -4440 3616 188 49 8 chr17 16370904 16371976 -69066504 + L1MB7 LINE L1 4997 6108 -76 1024 108 0 20 chr17 16371983 16372131 -69066349 + AluSc SINE Alu 152 296 -13 289 280 150 39 chr17 16372357 16372564 -69065916 + L1ME3A LINE L1 5426 5655 -511 331 235 206 35 chr17 16372617 16372787 -69065693 + L1ME3A LINE L1 5751 5949 -221 2263 110 0 3 chr17 16374271 16374571 -69063909 + AluSg SINE Alu 1 299 -11 185 219 0 49 chr17 16375003 16375044 -69063436 - MER5B DNA MER1_type -126 52 14 187 200 0 0 chr17 16375012 16375042 -69063438 + MER5A DNA MER1_type 145 174 -15 229 204 0 37 chr17 16375137 16375191 -69063289 - L2 LINE L2 -69 3244 3193 315 305 26 111 chr17 16375196 16375452 -69063028 + L1ME LINE L1 4918 5138 -1008 2342 93 0 0 chr17 16375452 16375752 -69062728 + AluSx SINE Alu 3 302 -10 315 305 26 111 chr17 16375752 16375846 -69062634 + L1ME LINE L1 5138 5238 -908 389 271 102 62 chr17 16375854 16376070 -69062410 + L1ME LINE L1 5283 5522 -599 2395 86 0 0 chr17 16376070 16376373 -69062107 - AluSq SINE Alu -10 303 1 389 271 102 62 chr17 16376373 16376540 -69061940 + L1ME LINE L1 5522 5681 -440 2241 97 24 0 chr17 16376561 16376851 -69061629 + AluSx SINE Alu 1 297 -15 272 148 37 19 chr17 16377081 16377135 -69061345 + MER66A LTR ERV1 282 336 -142 202 238 50 20 chr17 16377138 16377239 -69061241 + A-rich Low_complexity Low_complexity 2 105 0 257 270 159 24 chr17 16377453 16377579 -69060901 + MIR3 SINE MIR 15 157 -51 402 237 128 13 chr17 16377869 16377980 -69060500 - L1MC4 LINE L1 -4 8038 7903 279 0 0 0 chr17 16377980 16378011 -69060469 + (TG)n Simple_repeat Simple_repeat 2 32 0 402 237 128 13 chr17 16378011 16378055 -69060425 - L1MC4 LINE L1 -139 7903 7865 262 270 34 34 chr17 16378317 16378406 -69060074 - L2 LINE L2 0 3313 3225 2378 71 0 26 chr17 16378425 16378734 -69059746 + AluSg SINE Alu 1 301 -9 898 99 123 105 chr17 16378880 16379119 -69059361 + L1MA7 LINE L1 6064 6307 -5 1297 90 6 0 chr17 16380077 16380243 -69058237 + AluSq SINE Alu 132 298 -15 1607 148 87 0 chr17 16380816 16381093 -69057387 - AluSq SINE Alu -12 301 1 1869 224 42 28 chr17 16381212 16381521 -69056959 + L1M4 LINE L1 4072 4375 -1771 2042 116 3 7 chr17 16381521 16381815 -69056665 + AluSp SINE Alu 2 294 -19 1869 224 42 28 chr17 16381815 16382189 -69056291 + L1M4 LINE L1 4375 4765 -1381 24 32 0 0 chr17 16382517 16382548 -69055932 + AT_rich Low_complexity Low_complexity 1 31 0 1169 160 21 21 chr17 16382672 16382909 -69055571 + L1M4 LINE L1 5549 5785 -393 1812 119 13 36 chr17 16382958 16383260 -69055220 + AluSx SINE Alu 1 295 -17 1107 206 33 5 chr17 16383482 16383696 -69054784 + AluJo SINE Alu 2 221 -91 21 0 0 0 chr17 16383703 16383724 -69054756 + AT_rich Low_complexity Low_complexity 1 21 0 1170 252 98 46 chr17 16383725 16383807 -69054673 - HAL1b LINE L1 -636 712 636 2370 109 0 6 chr17 16383807 16384119 -69054361 + AluSp SINE Alu 1 310 -3 1170 252 98 46 chr17 16384119 16384131 -69054349 - HAL1b LINE L1 -712 636 626 2034 124 0 0 chr17 16384131 16384441 -69054039 - AluSx SINE Alu 0 310 1 1170 252 98 46 chr17 16384441 16384955 -69053525 - HAL1b LINE L1 -722 626 70 2095 108 24 0 chr17 16385801 16386088 -69052392 + AluSq SINE Alu 2 295 -18 2337 108 0 0 chr17 16386090 16386427 -69052053 + AluY SINE Alu 1 337 0 21 0 0 31 chr17 16386677 16386695 -69051785 + AT_rich Low_complexity Low_complexity 1 19 -12 1670 177 17 10 chr17 16386695 16386983 -69051497 + AluSx SINE Alu 1 290 -22 21 0 0 31 chr17 16386983 16386996 -69051484 + AT_rich Low_complexity Low_complexity 19 31 0 1625 224 12 29 chr17 16387124 16387606 -69050874 + L1MA9 LINE L1 3271 3744 -2402 750 60 4 2 chr17 16387606 16387856 -69050624 + AluY SINE Alu 1 307 -4 667 199 0 13 chr17 16387856 16388007 -69050473 + L1MA9 LINE L1 3735 3883 -2263 * 3368 188 69 42 chr17 16387997 16388345 -69050135 + L1MA9 LINE L1 5336 5673 -639 1912 164 10 0 chr17 16388345 16388637 -69049843 + AluJb SINE Alu 5 299 -13 3368 188 69 42 chr17 16388637 16388749 -69049731 + L1MA9 LINE L1 5673 5780 -532 2256 125 0 0 chr17 16388749 16389053 -69049427 + AluSx SINE Alu 1 304 -8 453 116 0 0 chr17 16389058 16389127 -69049353 + (TG)n Simple_repeat Simple_repeat 2 70 0 3368 188 69 42 chr17 16389127 16389573 -69048907 + L1MA9 LINE L1 5783 6274 -38 349 204 21 65 chr17 16389592 16389685 -69048795 - MER58 DNA MER1_type -2331 89 1 1473 240 82 26 chr17 16389801 16390315 -69048165 + Charlie2 DNA MER1_type 1882 2445 -417 2385 87 7 0 chr17 16390315 16390624 -69047856 - AluY SINE Alu 0 311 1 1473 240 82 26 chr17 16390624 16390788 -69047692 + Charlie2 DNA MER1_type 2445 2598 -264 5448 178 31 56 chr17 16390796 16393259 -69045221 + L1MA9 LINE L1 3881 6276 -36 2134 148 3 3 chr17 16393274 16393585 -69044895 + AluSx SINE Alu 1 311 -1 1418 137 121 20 chr17 16393591 16393839 -69044641 + AluJb SINE Alu 36 308 -4 196 313 16 16 chr17 16393955 16394019 -69044461 - MIR SINE MIR -96 166 103 506 219 164 27 chr17 16394021 16394167 -69044313 - MER5B DNA MER1_type 0 178 13 21 36 0 0 chr17 16394337 16394365 -69044115 + AT_rich Low_complexity Low_complexity 1 28 0 180 264 56 42 chr17 16394908 16394980 -69043500 - MIR3 SINE MIR -25 183 111 2076 198 40 60 chr17 16395141 16395494 -69042986 + L1MB7 LINE L1 5601 5939 -245 1802 167 30 16 chr17 16395494 16395799 -69042681 + AluJo SINE Alu 1 309 -3 2076 198 40 60 chr17 16395799 16396041 -69042439 + L1MB7 LINE L1 5939 6184 0 2062 130 0 3 chr17 16396202 16396495 -69041985 + AluSg SINE Alu 1 292 -18 2212 114 0 0 chr17 16396615 16396914 -69041566 + AluSx SINE Alu 1 299 -13 481 311 95 49 chr17 16396948 16396984 -69041496 + L1MDa LINE L1 1281 1314 -1587 1962 164 0 0 chr17 16396984 16397283 -69041197 + AluSx SINE Alu 1 299 -13 481 311 95 49 chr17 16397283 16397823 -69040657 + L1MDa LINE L1 1314 2010 -891 1767 199 10 0 chr17 16397823 16398129 -69040351 + AluJo SINE Alu 1 309 -3 481 311 95 49 chr17 16398129 16398211 -69040269 + L1MDa LINE L1 2010 2087 -814 2287 77 10 23 chr17 16398213 16398513 -69039967 - AluY SINE Alu -15 296 1 439 312 85 54 chr17 16398596 16399352 -69039128 + L1MEc LINE L1 37 815 -5581 437 258 76 55 chr17 16399343 16399704 -69038776 + L1MEc LINE L1 1038 1411 -4985 * 1698 172 3 68 chr17 16399704 16400042 -69038438 + 7SLRNA srpRNA srpRNA 1 316 -4 437 258 76 55 chr17 16400042 16400102 -69038378 + L1MEc LINE L1 1411 1468 -4928 890 155 0 7 chr17 16400104 16400246 -69038234 + AluSq/x SINE Alu 1 141 -171 2194 110 0 0 chr17 16400246 16400537 -69037943 + AluSx SINE Alu 1 291 -21 803 239 170 46 chr17 16400612 16401068 -69037412 + L1ME1 LINE L1 5658 6140 -26 2287 101 0 7 chr17 16401107 16401405 -69037075 - AluSq SINE Alu -17 296 1 485 214 65 18 chr17 16401490 16401658 -69036822 + L1M4 LINE L1 3927 4102 -2044 185 365 122 41 chr17 16401665 16401936 -69036544 + L2 LINE L2 1222 1514 -1800 206 289 19 0 chr17 16402760 16402812 -69035668 + L2 LINE L2 3217 3269 -3 2321 110 3 0 chr17 16403062 16403372 -69035108 + AluSx SINE Alu 1 311 -1 327 340 57 64 chr17 16403427 16403724 -69034756 - L1M4 LINE L1 -1343 4803 4509 21 57 0 0 chr17 16403828 16403863 -69034617 + AT_rich Low_complexity Low_complexity 1 35 0 200 191 29 15 chr17 16403977 16404045 -69034435 + (TA)n Simple_repeat Simple_repeat 1 69 0 21 0 0 0 chr17 16404199 16404220 -69034260 + AT_rich Low_complexity Low_complexity 1 21 0 1420 158 15 125 chr17 16404260 16404416 -69034064 + AluJb SINE Alu 1 102 -200 2510 77 0 0 chr17 16404416 16404727 -69033753 + AluY SINE Alu 1 311 0 1097 171 29 0 chr17 16404731 16404906 -69033574 + AluJb SINE Alu 120 299 -13 1866 123 46 3 chr17 16404925 16405210 -69033270 + AluSg SINE Alu 1 297 -13 28 0 0 0 chr17 16405234 16405262 -69033218 + AT_rich Low_complexity Low_complexity 1 28 0 201 296 104 9 chr17 16405410 16405525 -69032955 - MIR3 SINE MIR -42 166 41 261 284 162 45 chr17 16405792 16405948 -69032532 - L1MC4a LINE L1 -1775 6033 5842 2515 69 0 3 chr17 16405948 16406251 -69032229 + AluY SINE Alu 1 302 -9 261 284 162 45 chr17 16406251 16406316 -69032164 - L1MC4a LINE L1 -1966 5842 5786 2522 67 7 0 chr17 16406316 16406613 -69031867 + AluSp SINE Alu 1 299 -14 252 0 0 0 chr17 16407089 16407117 -69031363 + (CA)n Simple_repeat Simple_repeat 2 29 0 2213 111 0 35 chr17 16408078 16408394 -69030086 + AluSc SINE Alu 1 305 -4 1922 157 3 0 chr17 16409189 16409476 -69029004 + AluSx SINE Alu 1 288 -24 2290 104 0 16 chr17 16409680 16409817 -69028663 + AluSx SINE Alu 1 139 -173 2345 98 3 0 chr17 16409817 16410124 -69028356 + AluSg SINE Alu 1 308 -2 2290 104 0 16 chr17 16410124 16410295 -69028185 + AluSx SINE Alu 139 304 -8 288 0 0 0 chr17 16410913 16410945 -69027535 + (CA)n Simple_repeat Simple_repeat 2 33 0 607 267 110 48 chr17 16410972 16411536 -69026944 + L2 LINE L2 2588 3204 -109 286 205 80 152 chr17 16411731 16412145 -69026335 + L1MC/D LINE L1 4549 4932 -1214 280 228 8 94 chr17 16412113 16412240 -69026240 + L1P LINE L1 4901 5016 -1130 * 406 185 0 37 chr17 16412638 16412719 -69025761 - MIR SINE MIR -105 157 80 2179 121 3 0 chr17 16412811 16413118 -69025362 + AluSp SINE Alu 1 308 -5 563 319 74 30 chr17 16413121 16413213 -69025267 + L1MC/D LINE L1 5265 5351 -2457 2328 109 6 0 chr17 16413213 16413524 -69024956 + AluSq SINE Alu 1 313 0 2443 93 3 0 chr17 16413528 16413838 -69024642 + AluSp SINE Alu 1 311 -2 563 319 74 30 chr17 16413838 16414147 -69024333 + L1MC/D LINE L1 5353 5689 -2119 2297 111 0 0 chr17 16414260 16414557 -69023923 - AluSx SINE Alu -14 298 2 2558 65 7 0 chr17 16415332 16415641 -69022839 + AluY SINE Alu 1 311 0 2450 68 0 58 chr17 16415904 16416230 -69022250 - AluSc SINE Alu -2 307 1 1533 181 52 7 chr17 16416443 16416730 -69021750 + AluJo SINE Alu 3 302 -10 754 148 7 49 chr17 16417313 16417455 -69021025 + FLAM_C SINE Alu 2 137 -6 2137 128 10 0 chr17 16417542 16417832 -69020648 + AluSx SINE Alu 1 293 -19 21 0 0 0 chr17 16417943 16417964 -69020516 + AT_rich Low_complexity Low_complexity 1 21 0 2212 97 3 3 chr17 16417974 16418262 -69020218 + AluSp SINE Alu 1 288 -25 21 36 0 0 chr17 16418268 16418296 -69020184 + AT_rich Low_complexity Low_complexity 1 28 0 2443 76 0 7 chr17 16418602 16418903 -69019577 - AluY SINE Alu -12 299 1 195 305 84 42 chr17 16418995 16419090 -69019390 + MIR3 SINE MIR 67 165 -43 1433 170 101 17 chr17 16419117 16419405 -69019075 - AluJb SINE Alu 0 312 1 2217 91 37 7 chr17 16419868 16420164 -69018316 + AluSg SINE Alu 1 305 -5 1734 147 56 3 chr17 16420662 16420947 -69017533 + AluJb SINE Alu 1 300 -12 2403 72 10 3 chr17 16421083 16421389 -69017091 + AluY SINE Alu 1 308 -3 392 227 57 43 chr17 16421543 16421684 -69016796 - MIR SINE MIR -43 219 77 202 159 0 45 chr17 16423353 16423397 -69015083 + (CCG)n Simple_repeat Simple_repeat 2 43 0 2004 115 10 0 chr17 16424091 16424386 -69014094 + AluSx SINE Alu 1 298 -14 2398 56 28 0 chr17 16424387 16424674 -69013806 + AluSg SINE Alu 1 295 -15 401 206 56 9 chr17 16425975 16426082 -69012398 + L1MB7 LINE L1 6071 6182 -2 386 294 37 0 chr17 16426200 16426309 -69012171 - L2 LINE L2 -1 3312 3200 2280 103 7 3 chr17 16426550 16426852 -69011628 - AluSx SINE Alu -9 303 1 1970 85 68 48 chr17 16426938 16427232 -69011248 - AluY SINE Alu -11 300 1 1956 151 17 0 chr17 16427436 16427735 -69010745 - AluSx SINE Alu -8 304 1 2318 84 0 0 chr17 16427940 16428225 -69010255 + AluSc SINE Alu 1 285 -24 2262 101 7 3 chr17 16428353 16428660 -69009820 - AluSx SINE Alu -4 308 1 1041 124 0 0 chr17 16428660 16428805 -69009675 - AluSq/x SINE Alu -168 145 1 604 174 9 9 chr17 16429223 16429323 -69009157 - AluJo/FRAM SINE Alu -75 237 135 2001 132 27 10 chr17 16429323 16429489 -69008991 - AluSx SINE Alu -11 301 126 2242 96 20 3 chr17 16429489 16429791 -69008689 - AluSg SINE Alu -3 307 1 2001 132 27 10 chr17 16429791 16429920 -69008560 - AluSx SINE Alu -186 126 1 417 248 54 16 chr17 16430316 16430445 -69008035 - MIR SINE MIR -70 192 59 2128 144 0 0 chr17 16430602 16430914 -69007566 + AluSx SINE Alu 1 312 0 181 319 14 0 chr17 16431099 16431168 -69007312 - L2 LINE L2 -557 2757 2688 2234 110 0 0 chr17 16431169 16431459 -69007021 + AluSg SINE Alu 1 290 -20 935 126 0 15 chr17 16431470 16431605 -69006875 + FLAM_C SINE Alu 1 133 0 2107 104 0 28 chr17 16431807 16432095 -69006385 + AluSc SINE Alu 1 280 -29 1750 127 4 4 chr17 16432235 16432479 -69006001 - AluSx SINE Alu -68 244 1 2173 106 0 0 chr17 16432545 16432828 -69005652 - AluY SINE Alu -28 283 1 317 232 46 53 chr17 16432833 16432984 -69005496 - L1M4 LINE L1 -1538 4608 4459 242 218 152 30 chr17 16433071 16433236 -69005244 - L1MEd LINE L1 -5235 884 700 1609 80 0 14 chr17 16433252 16433464 -69005016 - AluY SINE Alu -3 308 100 269 59 0 0 chr17 16433466 16433500 -69004980 - AluY SINE Alu -274 34 1 193 28 0 56 chr17 16433500 16433536 -69004944 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 286 323 75 8 chr17 16433579 16433712 -69004768 - L1MEd LINE L1 -5501 618 477 239 217 0 0 chr17 16433714 16433760 -69004720 - MLT1G1 LTR MaLR -16 526 481 1042 183 59 9 chr17 16433777 16433996 -69004484 + AluJo SINE Alu 7 236 -76 845 265 217 12 chr17 16434089 16434492 -69003988 - MLT1G1 LTR MaLR -124 466 1 337 291 47 12 chr17 16434772 16434944 -69003536 - L1MEd LINE L1 -5936 183 6 2349 84 3 19 chr17 16434971 16435281 -69003199 - AluSx SINE Alu -5 307 3 2455 90 7 0 chr17 16435441 16435751 -69002729 - AluSp SINE Alu -1 312 1 3996 160 44 46 chr17 16435881 16435923 -69002557 - L1MB4 LINE L1 -6 6174 6133 2283 95 0 20 chr17 16435923 16436229 -69002251 - AluSq SINE Alu -12 301 2 262 24 71 0 chr17 16436230 16436272 -69002208 + T-rich Low_complexity Low_complexity 2 46 0 2452 38 0 14 chr17 16436272 16436559 -69001921 - AluY SINE Alu -27 284 2 3996 160 44 46 chr17 16436559 16436861 -69001619 - L1MB4 LINE L1 -46 6134 5833 1821 168 0 20 chr17 16436861 16437158 -69001322 + AluJo SINE Alu 1 291 -21 3996 160 44 46 chr17 16437158 16437197 -69001283 - L1MB4 LINE L1 -347 5833 5795 240 111 0 0 chr17 16437197 16437233 -69001247 + (TA)n Simple_repeat Simple_repeat 1 36 0 3996 160 44 46 chr17 16437233 16437708 -69000772 - L1MB4 LINE L1 -385 5795 5313 2470 83 0 3 chr17 16437731 16438033 -69000447 - AluSc SINE Alu -8 301 1 622 307 58 0 chr17 16438090 16438331 -69000149 + LTR33A LTR ERVL 262 516 -7 1005 151 0 42 chr17 16438495 16438661 -68999819 - AluSc SINE Alu -16 293 135 27 49 0 0 chr17 16438734 16438775 -68999705 + AT_rich Low_complexity Low_complexity 1 41 0 632 149 52 67 chr17 16438947 16439081 -68999399 - FLAM_C SINE Alu 0 133 2 1868 170 0 22 chr17 16439095 16439412 -68999068 - AluJo SINE Alu -2 310 1 23 33 0 0 chr17 16439459 16439489 -68998991 + AT_rich Low_complexity Low_complexity 1 30 0 289 199 185 7 chr17 16439706 16439852 -68998628 - Charlie7 DNA MER1_type -1 2611 2440 2317 114 0 0 chr17 16439868 16440174 -68998306 + AluSq SINE Alu 1 306 -7 2103 102 28 0 chr17 16440711 16440996 -68997484 + AluSg SINE Alu 2 294 -16 287 238 8 16 chr17 16441001 16441092 -68997388 - MIR SINE MIR -62 146 63 1801 124 84 0 chr17 16442060 16442333 -68996147 + AluSg SINE Alu 1 296 -14 2171 111 0 3 chr17 16442354 16442642 -68995838 + AluSx SINE Alu 1 287 -25 543 251 75 139 chr17 16442776 16443305 -68995175 - L1MC5 LINE L1 -51 7910 7470 2184 116 0 28 chr17 16443305 16443625 -68994855 - AluSx SINE Alu -1 311 1 543 251 75 139 chr17 16443625 16444068 -68994412 - L1MC5 LINE L1 -491 7470 7000 758 244 17 74 chr17 16444127 16444444 -68994036 - L1MC5 LINE L1 -998 7001 6717 2267 104 0 3 chr17 16444444 16444741 -68993739 - AluSx SINE Alu -16 296 1 758 244 17 74 chr17 16444741 16444804 -68993676 - L1MC5 LINE L1 -1282 6717 6652 971 179 27 0 chr17 16444804 16444974 -68993506 - AluJo SINE Alu -4 308 131 2389 101 0 0 chr17 16444974 16445280 -68993200 - AluSx SINE Alu -6 306 1 971 179 27 0 chr17 16445280 16445293 -68993187 - AluJo SINE Alu -181 131 120 1928 166 7 3 chr17 16445391 16445698 -68992782 + AluJb SINE Alu 1 308 -4 2485 76 0 0 chr17 16445788 16446089 -68992391 + AluSg SINE Alu 1 301 -9 1547 88 5 0 chr17 16446298 16446502 -68991978 - AluSx SINE Alu -2 310 106 2291 100 0 3 chr17 16446502 16446801 -68991679 + AluSg SINE Alu 2 299 -11 843 114 0 0 chr17 16446801 16446915 -68991565 - AluSx SINE Alu -198 114 1 734 193 0 22 chr17 16446925 16447060 -68991420 + FLAM_A SINE Alu 1 132 -1 2422 84 3 3 chr17 16447075 16447385 -68991095 + AluSg SINE Alu 1 310 0 1286 165 121 40 chr17 16447664 16447838 -68990642 - AluJo SINE Alu -18 294 89 2508 128 43 19 chr17 16447838 16448253 -68990227 + MSTA LTR MaLR 1 425 -3 1286 165 121 40 chr17 16448253 16448350 -68990130 - AluJo SINE Alu -223 89 1 1670 171 19 13 chr17 16448362 16448672 -68989808 - AluJo SINE Alu 0 312 1 2423 73 3 19 chr17 16448699 16449012 -68989468 + AluSp SINE Alu 1 308 -5 1940 104 79 0 chr17 16449179 16449457 -68989023 + AluSp SINE Alu 1 300 -13 594 271 111 0 chr17 16449629 16449916 -68988564 - L1ME4a LINE L1 -194 5927 5603 1475 203 33 13 chr17 16449916 16450221 -68988259 - AluJo SINE Alu -1 311 1 594 271 111 0 chr17 16450221 16450239 -68988241 - L1ME4a LINE L1 -518 5603 5588 239 28 0 0 chr17 16450524 16450560 -68987920 - AluSx SINE Alu 0 308 273 1479 136 47 5 chr17 16450567 16450780 -68987700 - AluSx SINE Alu -90 222 1 2202 121 3 0 chr17 16450924 16451222 -68987258 - AluSx SINE Alu -13 299 1 312 280 56 9 chr17 16451416 16451523 -68986957 + MIR SINE MIR 28 139 -123 4933 71 48 5 chr17 16451645 16452307 -68986173 - LTR8 LTR ERV1 0 691 1 297 214 0 0 chr17 16452473 16452529 -68985951 - Tigger5 DNA MER2_type -6 2317 2262 1990 159 0 10 chr17 16452540 16452848 -68985632 - AluJb SINE Alu -5 307 3 2160 128 7 0 chr17 16452859 16453163 -68985317 - AluSq SINE Alu -7 306 1 1045 118 0 0 chr17 16453164 16453299 -68985181 - AluSq/x SINE Alu -177 135 1 370 231 0 0 chr17 16453302 16453380 -68985100 + Tigger5 DNA MER2_type 2243 2320 -3 356 48 0 0 chr17 16453395 16453437 -68985043 - AluSc SINE Alu -17 282 241 1086 94 0 7 chr17 16453437 16453575 -68984905 - AluSc SINE Alu -172 137 1 579 195 0 0 chr17 16453575 16453693 -68984787 + (CATATA)n Simple_repeat Simple_repeat 3 120 0 2204 86 0 40 chr17 16453693 16453995 -68984485 - AluY SINE Alu -21 290 1 2383 67 21 0 chr17 16454110 16454394 -68984086 + AluSc SINE Alu 1 290 -19 1370 193 55 55 chr17 16454440 16454545 -68983935 - MLT1B LTR MaLR -4 386 282 2877 6 0 13 chr17 16454545 16454861 -68983619 - AluYb8 SINE Alu -6 312 1 1370 193 55 55 chr17 16454861 16455138 -68983342 - MLT1B LTR MaLR -107 283 4 1552 185 229 0 chr17 16455141 16455482 -68982998 - MLT1B-int LTR MaLR 0 1735 1317 359 228 65 11 chr17 16455458 16455550 -68982930 - MLT1B-int LTR MaLR -953 782 686 * 3216 194 35 21 chr17 16455647 16455754 -68982726 - MLT1B-int LTR MaLR -655 716 612 2424 92 0 0 chr17 16455754 16456058 -68982422 - AluSg SINE Alu -6 304 1 3216 194 35 21 chr17 16456058 16456656 -68981824 - MLT1B-int LTR MaLR -759 612 1 1089 196 36 46 chr17 16456656 16456937 -68981543 - MLT1A2 LTR MaLR 0 374 97 811 163 16 0 chr17 16456939 16457068 -68981412 + Tigger7 DNA MER2_type 1 131 -602 1891 120 0 7 chr17 16457068 16457344 -68981136 + AluSx SINE Alu 1 274 -38 1991 189 176 22 chr17 16457344 16457357 -68981123 - MLT2B3 LTR ERVL -22 532 522 207 0 0 0 chr17 16457357 16457380 -68981100 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1991 189 176 22 chr17 16457380 16457816 -68980664 - MLT2B3 LTR ERVL -32 522 14 1854 145 0 10 chr17 16457825 16458122 -68980358 - AluSq SINE Alu -19 294 1 964 164 0 7 chr17 16458145 16458297 -68980183 + Tigger7 DNA MER2_type 2337 2487 0 406 188 115 31 chr17 16458297 16458393 -68980087 - MLT1A2 LTR MaLR -286 104 1 592 237 160 12 chr17 16458587 16458756 -68979724 - MIR SINE MIR -58 204 11 395 313 41 27 chr17 16458800 16458947 -68979533 - MIR SINE MIR -70 192 44 1897 153 10 0 chr17 16459016 16459311 -68979169 + AluJb SINE Alu 1 298 -14 199 246 87 72 chr17 16459581 16459650 -68978830 - L2 LINE L2 -10 3303 3234 2291 88 0 0 chr17 16459939 16460244 -68978236 - AluSc SINE Alu -4 305 1 44 63 0 0 chr17 16460418 16460497 -68977983 + AT_rich Low_complexity Low_complexity 1 79 0 1226 163 26 115 chr17 16460808 16461157 -68977323 + AluYb8 SINE Alu 1 318 0 636 163 23 0 chr17 16461269 16461398 -68977082 + L1MA7 LINE L1 6154 6285 -6 1522 185 17 14 chr17 16461534 16461831 -68976649 + AluJo SINE Alu 1 298 -14 213 279 67 117 chr17 16461890 16462069 -68976411 + L2 LINE L2 2893 3062 -210 2332 93 3 0 chr17 16462129 16462439 -68976041 - AluSp SINE Alu -1 312 2 183 114 0 0 chr17 16462450 16462485 -68975995 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2255 77 7 0 chr17 16462487 16462774 -68975706 - AluY SINE Alu -22 289 1 350 230 3 24 chr17 16463996 16464106 -68974374 + L1MC/D LINE L1 5664 5768 -353 1867 99 3 51 chr17 16464197 16464522 -68973958 - AluSg SINE Alu 0 311 1 1474 165 53 4 chr17 16464540 16464855 -68973625 - AluJb SINE Alu 0 333 6 533 144 41 41 chr17 16464884 16464981 -68973499 + AluJb SINE Alu 194 290 -22 2296 93 0 10 chr17 16465007 16465319 -68973161 + AluSq SINE Alu 1 309 -4 2039 101 7 0 chr17 16465657 16465934 -68972546 + AluSq SINE Alu 3 281 -32 768 52 0 0 chr17 16465934 16466031 -68972449 + (GA)n Simple_repeat Simple_repeat 2 98 0 2197 102 0 0 chr17 16466047 16466350 -68972130 - AluSg SINE Alu -7 303 1 1976 121 11 0 chr17 16466353 16466673 -68971807 - AluSp SINE Alu 0 323 1 668 106 97 0 chr17 16467182 16467295 -68971185 + L1MD3 LINE L1 4832 4955 -1191 598 143 0 36 chr17 16467296 16467408 -68971072 + FLAM_C SINE Alu 36 143 0 626 188 72 0 chr17 16467408 16467546 -68970934 + L1MD3 LINE L1 4943 5090 -1056 4164 184 81 64 chr17 16467546 16468710 -68969770 + MER52A LTR ERV1 1 1226 -529 2189 107 0 3 chr17 16468710 16469009 -68969471 + AluSg SINE Alu 1 298 -12 4164 184 81 64 chr17 16469009 16469109 -68969371 + MER52A LTR ERV1 1226 1323 -432 735 177 0 8 chr17 16469114 16469238 -68969242 + MER52A LTR ERV1 1633 1755 0 927 196 10 0 chr17 16469238 16469437 -68969043 + L1MD3 LINE L1 5087 5287 -859 366 202 9 132 chr17 16469437 16469559 -68968921 + AluJ/FLAM SINE Alu 1 93 -209 1160 147 0 21 chr17 16469575 16469766 -68968714 - AluJb SINE Alu -115 197 11 22 0 0 0 chr17 16469783 16469805 -68968675 + AT_rich Low_complexity Low_complexity 1 22 0 2031 133 0 0 chr17 16469813 16470106 -68968374 + AluSx SINE Alu 1 293 -19 1407 196 26 191 chr17 16470107 16470421 -68968059 + L1MD3 LINE L1 5306 5544 -2451 688 181 24 16 chr17 16470421 16470548 -68967932 + FLAM_A SINE Alu 12 139 -3 2429 167 41 24 chr17 16470548 16471058 -68967422 + L1MB7 LINE L1 5604 6122 -62 1515 169 53 3 chr17 16471059 16471343 -68967137 - AluJo SINE Alu -14 298 1 2106 110 7 3 chr17 16471392 16471693 -68966787 - AluSc SINE Alu -7 302 1 2186 79 0 64 chr17 16471706 16471883 -68966597 - AluSq SINE Alu -5 308 160 2042 106 25 0 chr17 16471883 16472167 -68966313 - AluSx SINE Alu -8 304 14 2186 79 0 64 chr17 16472167 16472318 -68966162 - AluSq SINE Alu -153 160 1 1723 72 83 51 chr17 16472472 16472799 -68965681 - AluSq SINE Alu 0 336 1 2139 96 3 3 chr17 16473333 16473626 -68964854 + AluSg SINE Alu 1 293 -17 1772 111 93 0 chr17 16474005 16474284 -68964196 + AluSx SINE Alu 1 305 -7 2241 65 0 10 chr17 16474471 16474764 -68963716 - AluY SINE Alu -16 295 6 2132 135 85 50 chr17 16474886 16475323 -68963157 - Tigger2 DNA MER2_type 0 2718 2267 478 72 29 14 chr17 16475305 16475374 -68963106 + MER8 DNA MER2_type 170 239 0 * 911 188 53 0 chr17 16475427 16475597 -68962883 + FRAM SINE Alu 1 176 0 327 288 40 107 chr17 16475834 16476133 -68962347 - L2 LINE L2 -68 3204 2926 212 0 36 0 chr17 16476306 16476334 -68962146 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2090 109 0 3 chr17 16476336 16476621 -68961859 - AluSq SINE Alu -28 285 2 2039 119 0 10 chr17 16476622 16476934 -68961546 - AluSc SINE Alu 0 309 1 538 224 98 7 chr17 16476940 16477083 -68961397 - MIR SINE MIR -26 236 81 2095 103 7 10 chr17 16477238 16477539 -68960941 + AluSx SINE Alu 1 300 -12 380 305 46 40 chr17 16477539 16477690 -68960790 - MER5B DNA MER1_type -26 152 1 2201 87 0 7 chr17 16477877 16478176 -68960304 + AluSq SINE Alu 1 297 -16 210 100 80 0 chr17 16478297 16478347 -68960133 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 2234 86 20 0 chr17 16478487 16478789 -68959691 + AluSx SINE Alu 1 308 -4 339 299 97 19 chr17 16479117 16479271 -68959209 + MIR3 SINE MIR 40 205 -3 585 101 54 88 chr17 16479311 16479409 -68959071 - MER53 DNA DNA 0 189 96 2246 99 0 0 chr17 16479409 16479702 -68958778 - AluSg SINE Alu -17 293 1 585 101 54 88 chr17 16479702 16479751 -68958729 - MER53 DNA DNA -93 96 47 180 0 0 0 chr17 16479751 16479771 -68958709 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 541 195 31 39 chr17 16479774 16479902 -68958578 - FLAM_C SINE Alu -16 127 1 489 271 93 74 chr17 16480320 16480741 -68957739 + L2 LINE L2 1685 2113 -1201 483 320 174 12 chr17 16480914 16481161 -68957319 - L2 LINE L2 -1 3271 2985 186 398 68 31 chr17 16481206 16481621 -68956859 - L2 LINE L2 -454 2860 2431 216 97 0 0 chr17 16482248 16482279 -68956201 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3135 120 30 52 chr17 16482280 16482313 -68956167 - MER41B LTR ERV1 -88 547 515 2252 87 0 0 chr17 16482313 16482611 -68955869 + AluSq SINE Alu 1 298 -15 3135 120 30 52 chr17 16482611 16482622 -68955858 - MER41B LTR ERV1 -120 515 505 2169 114 0 0 chr17 16482622 16482930 -68955550 + AluSx SINE Alu 1 308 -4 3135 120 30 52 chr17 16482930 16483443 -68955037 - MER41B LTR ERV1 -130 505 1 13023 93 21 18 chr17 16483443 16483614 -68954866 - MER41B-int LTR ERV1 0 5946 5777 1998 144 0 0 chr17 16483614 16483913 -68954567 + AluSx SINE Alu 1 299 -13 13023 93 21 18 chr17 16483913 16484323 -68954157 - MER41B-int LTR ERV1 -169 5777 5370 1991 121 0 14 chr17 16484323 16484632 -68953848 + AluSq SINE Alu 1 305 0 13023 93 21 18 chr17 16484632 16485928 -68952552 - MER41B-int LTR ERV1 -576 5370 2430 1493 132 0 0 chr17 16485928 16486141 -68952339 - AluSx SINE Alu -12 298 86 632 119 0 0 chr17 16486175 16486259 -68952221 - AluSx SINE Alu -226 86 3 2780 73 35 12 chr17 16486261 16486683 -68951797 - MER41A-int LTR ERV1 -2227 3719 3288 1653 119 65 18 chr17 16486669 16486946 -68951534 - MER41A-int LTR ERV1 -3025 2921 2632 * 532 165 35 0 chr17 16486945 16487030 -68951450 - MER41A-int LTR ERV1 -5858 88 1 * 1004 105 26 7 chr17 16487030 16487182 -68951298 - MER41A LTR ERV1 0 554 400 1054 148 76 52 chr17 16488355 16488565 -68949915 - L1MC1 LINE L1 -1 6332 6118 2054 111 0 0 chr17 16488567 16488875 -68949605 - AluSg1 SINE Alu 0 308 1 215 250 0 0 chr17 16490458 16490502 -68947978 + MIR3 SINE MIR 156 199 -9 1674 131 27 44 chr17 16490758 16490879 -68947601 + AluJb SINE Alu 1 123 -189 2118 118 0 0 chr17 16490879 16491175 -68947305 - AluSx SINE Alu -16 296 1 1674 131 27 44 chr17 16491175 16491351 -68947129 + AluJb SINE Alu 123 293 -19 739 203 0 0 chr17 16491411 16491544 -68946936 + FLAM_C SINE Alu 1 133 0 2287 91 0 3 chr17 16491842 16492149 -68946331 - AluSq SINE Alu -7 306 1 411 186 2 16 chr17 16492168 16492251 -68946229 - AluS SINE Alu -236 67 1 * 3923 83 2 63 chr17 16492251 16492834 -68945646 + LTR8 LTR ERV1 145 691 0 663 169 8 32 chr17 16492868 16492992 -68945488 - FLAM_C SINE Alu -21 122 2 1932 93 58 0 chr17 16493177 16493455 -68945025 + AluSg SINE Alu 1 294 -16 313 354 23 23 chr17 16494804 16494934 -68943546 + L2 LINE L2 3141 3270 -2 470 228 158 38 chr17 16495793 16495951 -68942529 - L1ME LINE L1 -452 5669 5493 195 42 0 0 chr17 16496050 16496074 -68942406 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2113 112 7 0 chr17 16496074 16496377 -68942103 - AluSq SINE Alu -8 305 1 2316 90 3 3 chr17 16496399 16496711 -68941769 - AluSp SINE Alu -1 312 1 2201 100 3 0 chr17 16497648 16497948 -68940532 - AluSp SINE Alu -12 301 1 1704 97 43 8 chr17 16497952 16498209 -68940271 - AluSx SINE Alu 0 312 47 206 136 23 0 chr17 16498226 16498270 -68940210 + C-rich Low_complexity Low_complexity 1 45 0 1396 182 52 21 chr17 16498270 16498556 -68939924 - AluJb SINE Alu -17 295 1 186 43 0 0 chr17 16498565 16498588 -68939892 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1561 149 11 8 chr17 16498590 16498852 -68939628 - AluJb SINE Alu -49 263 1 2164 122 3 0 chr17 16499098 16499409 -68939071 + AluSx SINE Alu 1 312 0 2206 99 3 0 chr17 16499456 16499759 -68938721 + AluSx SINE Alu 1 304 -8 504 165 0 0 chr17 16499762 16499841 -68938639 + FLAM SINE Alu 45 123 -20 1885 116 4 0 chr17 16499905 16500173 -68938307 - AluSx SINE Alu -10 302 34 217 336 57 16 chr17 16500237 16500359 -68938121 + L2 LINE L2 1662 1788 -1526 483 243 62 11 chr17 16500384 16500561 -68937919 + L1ME LINE L1 5615 5800 -321 2259 66 0 13 chr17 16501115 16501416 -68937064 + AluY SINE Alu 1 297 -14 222 274 201 62 chr17 16502006 16502185 -68936295 - MIR3 SINE MIR -2 206 3 428 268 51 29 chr17 16502527 16502665 -68935815 + LTR33A LTR ERVL 40 180 -343 655 222 54 45 chr17 16502721 16502942 -68935538 + LTR33A LTR ERVL 298 520 -3 2105 87 4 0 chr17 16503014 16503291 -68935189 + AluSx SINE Alu 21 298 -14 1018 156 6 0 chr17 16503369 16503529 -68934951 + AluJb SINE Alu 133 293 -19 2048 119 10 0 chr17 16503534 16503837 -68934643 + AluSq SINE Alu 1 306 -7 417 213 49 55 chr17 16503882 16504046 -68934434 - Charlie7 DNA MER1_type -1 2611 2449 302 284 25 0 chr17 16504053 16504134 -68934346 - Charlie7 DNA MER1_type -2521 91 9 2298 101 0 0 chr17 16504202 16504509 -68933971 + AluSg SINE Alu 1 307 -3 2193 50 4 14 chr17 16504612 16504891 -68933589 - AluY SINE Alu -35 276 1 1855 132 138 0 chr17 16505711 16506007 -68932473 + MER1B DNA MER1_type 1 337 0 199 308 39 0 chr17 16506073 16506125 -68932355 + L2 LINE L2 2717 2770 -544 2217 125 3 10 chr17 16506618 16506931 -68931549 + AluSx SINE Alu 1 311 -1 1050 118 0 0 chr17 16506931 16507067 -68931413 + AluSg/x SINE Alu 134 269 -43 2032 97 40 4 chr17 16507068 16507346 -68931134 + AluSx SINE Alu 25 312 0 2228 128 3 0 chr17 16508271 16508575 -68929905 + AluSx SINE Alu 1 305 -7 276 222 74 12 chr17 16508579 16508660 -68929820 - MIR SINE MIR -120 142 57 351 106 0 30 chr17 16509009 16509075 -68929405 - FAM SINE Alu 0 179 116 1068 171 21 36 chr17 16509075 16509132 -68929348 - AluJo SINE Alu -122 190 134 2405 96 3 0 chr17 16509132 16509434 -68929046 - AluSg SINE Alu -7 303 1 2475 79 7 0 chr17 16509436 16509741 -68928739 - AluY SINE Alu -4 307 1 1068 171 21 36 chr17 16509741 16509873 -68928607 - AluJo SINE Alu -179 133 1 2263 113 3 0 chr17 16510465 16510767 -68927713 - AluSc SINE Alu -4 305 3 1276 118 0 0 chr17 16511407 16511576 -68926904 - AluSg/x SINE Alu -8 302 134 2644 62 0 0 chr17 16511578 16511886 -68926594 - AluY SINE Alu -3 308 1 838 141 0 44 chr17 16512352 16512487 -68925993 + FLAM_C SINE Alu 5 133 0 396 266 28 46 chr17 16512608 16512717 -68925763 - L2 LINE L2 -5 3308 3202 927 168 39 39 chr17 16512731 16512877 -68925603 - MER20 DNA MER1_type -16 203 55 1592 150 49 65 chr17 16512877 16513184 -68925296 + AluJo SINE Alu 1 302 -10 927 168 39 39 chr17 16513184 16513240 -68925240 - MER20 DNA MER1_type -163 56 1 949 162 0 42 chr17 16513656 16513823 -68924657 - AluJo/FRAM SINE Alu -19 293 134 2180 107 3 7 chr17 16513823 16514121 -68924359 - AluSg SINE Alu -13 297 1 200 269 17 131 chr17 16514143 16514318 -68924162 - MIR SINE MIR -62 146 43 2406 85 3 3 chr17 16514395 16514701 -68923779 - AluSp SINE Alu -7 306 1 231 146 21 62 chr17 16515475 16515523 -68922957 + MIR SINE MIR 217 262 0 1587 172 47 37 chr17 16515557 16515853 -68922627 + AluJo SINE Alu 1 299 -13 186 43 0 0 chr17 16515882 16515905 -68922575 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 2312 102 0 0 chr17 16515925 16516218 -68922262 + AluSg1 SINE Alu 1 293 -16 446 220 28 46 chr17 16516320 16516429 -68922051 - L2 LINE L2 -5 3308 3202 890 184 0 7 chr17 16516481 16516622 -68921858 + AluJo SINE Alu 19 158 -154 1626 168 47 37 chr17 16516665 16516963 -68921517 - AluJo SINE Alu -11 301 1 714 173 0 0 chr17 16517045 16517155 -68921325 + AluJo SINE Alu 164 273 -39 2140 129 3 10 chr17 16517353 16517664 -68920816 + AluSg SINE Alu 1 309 -1 2281 125 3 0 chr17 16517669 16517980 -68920500 + AluSx SINE Alu 1 312 0 342 0 0 0 chr17 16518159 16518197 -68920283 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 371 48 57 chr17 16518317 16518414 -68920066 - MIR SINE MIR -69 139 42 2056 89 8 0 chr17 16518414 16518671 -68919809 - AluSq SINE Alu -18 295 37 188 371 48 57 chr17 16518671 16518697 -68919783 - MIR SINE MIR -166 42 17 288 329 63 14 chr17 16518718 16518861 -68919619 + MIR SINE MIR 5 154 -108 210 276 0 48 chr17 16519071 16519176 -68919304 + T-rich Low_complexity Low_complexity 2 101 0 315 221 92 53 chr17 16519187 16519318 -68919162 - MIR SINE MIR -64 198 63 11198 36 3 84 chr17 16519331 16520830 -68917650 - SVA Other Other 0 1386 9 2197 76 65 3 chr17 16523557 16523868 -68914612 - AluSg SINE Alu 0 329 1 420 264 52 21 chr17 16525162 16525334 -68913146 - MIR SINE MIR -59 203 32 22 35 0 0 chr17 16525966 16525995 -68912485 + AT_rich Low_complexity Low_complexity 1 29 0 615 243 91 61 chr17 16525997 16526138 -68912342 - L1ME4a LINE L1 -3 6118 5983 2317 102 3 3 chr17 16526138 16526443 -68912037 - AluSq SINE Alu -8 305 1 615 243 91 61 chr17 16526443 16526523 -68911957 - L1ME4a LINE L1 -138 5983 5907 2249 117 3 0 chr17 16526523 16526822 -68911658 + AluSg SINE Alu 1 300 -10 615 243 91 61 chr17 16526822 16526844 -68911636 - L1ME4a LINE L1 -214 5907 5887 1686 150 107 0 chr17 16526844 16527124 -68911356 + AluJo SINE Alu 1 310 -2 615 243 91 61 chr17 16527124 16527273 -68911207 - L1ME4a LINE L1 -234 5887 5712 2270 94 3 3 chr17 16527345 16527644 -68910836 + AluSx SINE Alu 1 299 -13 517 206 0 0 chr17 16527877 16527979 -68910501 + FLAM_A SINE Alu 1 102 -40 850 150 8 21 chr17 16528015 16528256 -68910224 + GA-rich Low_complexity Low_complexity 1 237 0 634 189 6 23 chr17 16528270 16528445 -68910035 + GA-rich Low_complexity Low_complexity 1 172 0 2249 123 0 19 chr17 16528490 16528807 -68909673 - AluSx SINE Alu -1 311 1 2374 113 0 0 chr17 16528808 16529110 -68909370 - AluSx SINE Alu -10 302 1 2221 116 3 0 chr17 16529110 16529412 -68909068 - AluSp SINE Alu -10 303 1 206 274 145 0 chr17 16529432 16529494 -68908986 - L2 LINE L2 -11 3261 3191 234 91 0 0 chr17 16529579 16529612 -68908868 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 2390 78 6 34 chr17 16529633 16529955 -68908525 - AluSp SINE Alu 0 313 1 2245 119 0 3 chr17 16529957 16530267 -68908213 - AluSx SINE Alu -3 309 1 317 311 0 0 chr17 16530339 16530471 -68908009 - L1M4 LINE L1 -3129 3017 2886 2554 195 106 12 chr17 16530497 16531065 -68907415 - MER82 DNA MER2_type -2 651 31 2225 111 3 3 chr17 16531108 16531406 -68907074 - AluSq SINE Alu -15 298 1 21 36 0 0 chr17 16531418 16531446 -68907034 + AT_rich Low_complexity Low_complexity 1 28 0 2170 114 0 19 chr17 16531482 16531789 -68906691 - AluSg SINE Alu -9 301 1 2056 123 0 27 chr17 16531823 16532137 -68906343 - AluSq SINE Alu 0 306 1 2067 84 15 96 chr17 16532196 16532530 -68905950 - AluSx SINE Alu -4 308 2 2404 71 40 0 chr17 16532936 16533232 -68905248 + AluY SINE Alu 1 308 -3 368 282 124 64 chr17 16533235 16533437 -68905043 + MIR SINE MIR 28 241 -21 231 219 0 135 chr17 16533985 16534081 -68904399 + MIR SINE MIR 144 226 -36 573 222 169 11 chr17 16534579 16534768 -68903712 + MIR SINE MIR 13 231 -31 421 299 171 19 chr17 16535080 16535233 -68903247 + L1ME LINE L1 5501 5696 -425 2045 133 17 0 chr17 16535233 16535527 -68902953 + AluSx SINE Alu 1 299 -13 421 299 171 19 chr17 16535527 16535584 -68902896 + L1ME LINE L1 5696 5743 -378 222 222 0 0 chr17 16535676 16535730 -68902750 + (TA)n Simple_repeat Simple_repeat 2 55 0 2255 88 3 0 chr17 16535876 16536161 -68902319 + AluSc SINE Alu 3 288 -21 1980 169 7 0 chr17 16536170 16536472 -68902008 + AluJb SINE Alu 1 304 -8 306 0 0 0 chr17 16536472 16536506 -68901974 + (TA)n Simple_repeat Simple_repeat 2 35 0 1172 119 18 0 chr17 16536640 16536808 -68901672 + AluSg/x SINE Alu 140 310 0 324 337 78 48 chr17 16537052 16537218 -68901262 - MER91A DNA MER1_type -23 173 3 500 317 160 13 chr17 16537788 16538088 -68900392 + HAL1 LINE L1 1113 1456 -1051 2366 107 0 0 chr17 16538099 16538398 -68900082 + AluSx SINE Alu 1 299 -13 2496 68 7 0 chr17 16538401 16538696 -68899784 + AluSc SINE Alu 1 297 -12 324 328 89 39 chr17 16538822 16539081 -68899399 + L1 LINE L1 2859 3130 -3016 * 463 289 117 63 chr17 16539051 16539401 -68899079 + L1M4 LINE L1 2248 2616 -3530 1021 160 35 25 chr17 16539465 16539630 -68898850 - AluJo SINE Alu 0 302 140 2133 107 17 14 chr17 16539630 16539938 -68898542 - AluSx SINE Alu 0 312 1 1021 160 35 25 chr17 16539938 16539951 -68898529 - AluJo SINE Alu -162 140 129 198 0 0 0 chr17 16539951 16539973 -68898507 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1021 160 35 25 chr17 16539973 16540013 -68898467 - AluJo SINE Alu -173 129 81 765 274 188 50 chr17 16540059 16540595 -68897885 + L1M4 LINE L1 2745 3354 -2792 780 135 326 6 chr17 16540602 16540780 -68897700 + AluSg/x SINE Alu 65 299 -10 2557 177 51 26 chr17 16540780 16541094 -68897386 + L1MB5 LINE L1 5496 5830 -344 2339 108 0 7 chr17 16541094 16541400 -68897080 + AluSg SINE Alu 1 304 -6 2557 177 51 26 chr17 16541400 16541617 -68896863 + L1MB5 LINE L1 5830 6040 -134 24 32 0 0 chr17 16541617 16541648 -68896832 + AT_rich Low_complexity Low_complexity 1 31 0 1160 186 21 0 chr17 16541648 16541836 -68896644 - AluJo SINE Alu -26 286 95 335 149 60 0 chr17 16541865 16541932 -68896548 + L1MB7 LINE L1 6095 6165 -19 2553 47 7 0 chr17 16542016 16542313 -68896167 + AluY SINE Alu 2 300 -11 335 271 111 49 chr17 16542448 16542592 -68895888 + L1M4 LINE L1 4458 4610 -1536 22 70 0 0 chr17 16542596 16542639 -68895841 + AT_rich Low_complexity Low_complexity 1 43 0 378 320 29 23 chr17 16542654 16542826 -68895654 + L1M4 LINE L1 4570 4742 -1404 2370 86 3 0 chr17 16542826 16543118 -68895362 + AluSg SINE Alu 1 293 -17 266 330 12 53 chr17 16543255 16543439 -68895041 + L1MC4a LINE L1 4504 4669 -1477 2118 93 7 4 chr17 16543439 16543718 -68894762 + AluSx SINE Alu 1 280 -32 266 330 12 53 chr17 16543718 16543872 -68894608 + L1MC4a LINE L1 4669 4828 -1318 2192 104 0 4 chr17 16544048 16544361 -68894119 + AluSg SINE Alu 1 312 0 1602 163 3 74 chr17 16544424 16544589 -68893891 - AluJo SINE Alu -10 302 127 2276 95 3 38 chr17 16544589 16544906 -68893574 - AluSp SINE Alu -1 312 7 1602 163 3 74 chr17 16544906 16544917 -68893563 - AluJo SINE Alu -185 127 117 2442 73 0 3 chr17 16544917 16545217 -68893263 - AluY SINE Alu -12 299 1 1602 163 3 74 chr17 16545217 16545364 -68893116 - AluJo SINE Alu -195 117 1 2473 91 0 0 chr17 16545398 16545707 -68892773 + AluSg SINE Alu 1 309 -1 491 256 118 31 chr17 16545805 16545834 -68892646 + L1MC4a LINE L1 5573 5598 -2210 2281 99 10 16 chr17 16545834 16546147 -68892333 + AluSq SINE Alu 1 311 -2 491 256 118 31 chr17 16546147 16546406 -68892074 + L1MC4a LINE L1 5598 5886 -1922 1136 175 101 9 chr17 16546406 16546623 -68891857 + AluJo SINE Alu 3 239 -73 1371 149 193 28 chr17 16546642 16546802 -68891678 - AluSg SINE Alu -10 290 158 299 65 22 0 chr17 16546802 16546848 -68891632 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2061 126 7 7 chr17 16546848 16547133 -68891347 - AluSx SINE Alu -27 285 1 1371 149 193 28 chr17 16547133 16547220 -68891260 - AluSg SINE Alu -141 159 1 32 0 0 0 chr17 16547224 16547256 -68891224 + AT_rich Low_complexity Low_complexity 1 32 0 754 178 7 22 chr17 16547399 16547534 -68890946 - AluJo SINE Alu -178 134 2 2356 113 0 0 chr17 16547547 16547857 -68890623 - AluSx SINE Alu -1 311 2 26 0 0 0 chr17 16547857 16547883 -68890597 + AT_rich Low_complexity Low_complexity 1 26 0 914 171 49 6 chr17 16548300 16548464 -68890016 - FRAM SINE Alu -6 170 1 228 35 0 0 chr17 16548535 16548564 -68889916 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2242 83 11 0 chr17 16548564 16548842 -68889638 - AluSq SINE Alu -32 281 1 827 131 8 0 chr17 16548873 16549003 -68889477 + L1MB3 LINE L1 6008 6138 -45 1465 181 54 7 chr17 16549003 16549279 -68889201 + AluJo SINE Alu 1 289 -23 2464 95 0 0 chr17 16549489 16549794 -68888686 - AluSx SINE Alu -7 305 1 2277 114 0 3 chr17 16549794 16550092 -68888388 - AluSx SINE Alu -15 297 1 877 171 95 0 chr17 16550151 16550309 -68888171 - AluJb SINE Alu -2 310 138 21 0 0 0 chr17 16550416 16550437 -68888043 + AT_rich Low_complexity Low_complexity 1 21 0 1886 105 8 4 chr17 16551205 16551462 -68887018 - AluSp SINE Alu -13 300 43 805 138 9 0 chr17 16551903 16552019 -68886461 - FLAM_C SINE Alu -26 117 1 2138 103 0 7 chr17 16552625 16552943 -68885537 - AluSg SINE Alu 0 316 1 1431 54 0 43 chr17 16552986 16553161 -68885319 + AluY SINE Alu 134 302 -9 1599 155 8 8 chr17 16553161 16553406 -68885074 + AluJb SINE Alu 1 245 -67 1003 279 125 24 chr17 16553841 16554341 -68884139 + L1MC4a LINE L1 5322 5883 -1925 2323 93 7 0 chr17 16554341 16554630 -68883850 + AluSx SINE Alu 1 291 -21 1003 279 125 24 chr17 16554630 16554673 -68883807 + L1MC4a LINE L1 5883 5920 -1888 1831 175 3 3 chr17 16554714 16555023 -68883457 - AluJb SINE Alu 0 309 1 254 89 133 0 chr17 16555403 16555448 -68883032 - MER66B LTR ERV1 -141 345 295 312 248 53 44 chr17 16555458 16555571 -68882909 + L1ME4a LINE L1 5634 5747 -374 345 180 30 30 chr17 16555861 16555961 -68882519 + L1ME4a LINE L1 5963 6062 -59 2314 121 3 0 chr17 16556022 16556329 -68882151 - AluSx SINE Alu -4 308 1 349 275 117 0 chr17 16557627 16557747 -68880733 - L1MC5 LINE L1 -62 7899 7766 2062 122 7 0 chr17 16558217 16558512 -68879968 - AluSg SINE Alu -13 297 1 2320 82 7 0 chr17 16558810 16559103 -68879377 - AluSp SINE Alu -18 295 1 227 325 0 0 chr17 16559412 16559495 -68878985 - L1ME4a LINE L1 -76 6045 5963 22 0 0 0 chr17 16560871 16560893 -68877587 + GC_rich Low_complexity Low_complexity 1 22 0 200 135 0 58 chr17 16561027 16561079 -68877401 + (CGG)n Simple_repeat Simple_repeat 1 49 0 354 274 121 88 chr17 16561239 16561578 -68876902 + L1M2 LINE L1 776 1125 -5724 2271 80 3 7 chr17 16561977 16562276 -68876204 - AluSq SINE Alu -15 298 1 842 40 64 8 chr17 16562284 16562409 -68876071 - AluSc SINE Alu -1 308 177 1341 147 72 44 chr17 16562487 16562639 -68875841 - AluJo SINE Alu -7 305 159 183 42 0 0 chr17 16562639 16562663 -68875817 + (C)n Simple_repeat Simple_repeat 1 24 0 1341 147 72 44 chr17 16562663 16562803 -68875677 - AluJo SINE Alu -153 159 5 501 211 280 0 chr17 16562837 16563012 -68875468 - L1ME3 LINE L1 -14 6148 5925 884 168 17 89 chr17 16563029 16563208 -68875272 + FRAM SINE Alu 1 166 0 372 209 22 137 chr17 16563224 16563290 -68875190 + L1ME3 LINE L1 5975 6018 -144 1958 121 46 4 chr17 16563290 16563571 -68874909 + AluSg SINE Alu 1 293 -17 372 209 22 137 chr17 16563571 16563643 -68874837 + L1ME3 LINE L1 6018 6097 -65 2334 100 10 0 chr17 16563689 16563999 -68874481 + AluSp SINE Alu 1 313 0 2039 79 79 0 chr17 16564127 16564404 -68874076 + AluSq SINE Alu 1 299 -14 2146 107 0 26 chr17 16564406 16564714 -68873766 + AluSx SINE Alu 1 300 -12 877 225 29 12 chr17 16564943 16565183 -68873297 + L1M4 LINE L1 4615 4858 -1288 2255 92 3 0 chr17 16565183 16565495 -68872985 - AluSp SINE Alu 0 314 2 1922 133 9 43 chr17 16565505 16565828 -68872652 - AluSx SINE Alu 0 312 1 2408 89 7 0 chr17 16565882 16566186 -68872294 - AluSq SINE Alu -7 306 1 206 206 191 15 chr17 16566586 16566654 -68871826 + L2 LINE L2 3229 3308 -5 1918 140 0 14 chr17 16566737 16567055 -68871425 - AluSx SINE Alu 0 314 1 1826 107 8 0 chr17 16567096 16567338 -68871142 - AluSq SINE Alu -17 296 53 1815 157 14 3 chr17 16567414 16567701 -68870779 + AluJo SINE Alu 1 290 -22 306 256 154 17 chr17 16567812 16567929 -68870551 - L2 LINE L2 -1 3312 3180 267 250 54 27 chr17 16568251 16568363 -68870117 - L1M4 LINE L1 -1487 4659 4545 1132 249 99 26 chr17 16568363 16568789 -68869691 - MLT1L LTR MaLR -6 609 153 975 160 58 11 chr17 16569076 16569264 -68869216 + MER46A DNA MER2_type 40 236 0 695 195 92 0 chr17 16570127 16570272 -68868208 + MIR SINE MIR 33 189 -64 2246 204 99 7 chr17 16570437 16571045 -68867435 - L1M4 LINE L1 -2912 3234 2571 2312 108 0 0 chr17 16571046 16571351 -68867129 - AluSx SINE Alu -7 305 1 1074 90 0 0 chr17 16571354 16571487 -68866993 - AluSq/x SINE Alu -180 133 1 1421 73 0 0 chr17 16571787 16571964 -68866516 + AluY SINE Alu 127 303 -8 2322 95 0 3 chr17 16571971 16572275 -68866205 + AluSq SINE Alu 1 303 -10 1934 167 0 3 chr17 16572990 16573301 -68865179 - AluJb SINE Alu -2 310 1 2209 112 0 3 chr17 16573545 16573840 -68864640 + AluSx SINE Alu 2 295 -17 325 222 11 11 chr17 16573861 16573951 -68864529 - L1ME3A LINE L1 -230 5940 5851 648 265 169 48 chr17 16574157 16574338 -68864142 - L1ME3A LINE L1 -355 5807 5649 1650 143 0 16 chr17 16574338 16574590 -68863890 + AluSq SINE Alu 1 248 -65 648 265 169 48 chr17 16574590 16575030 -68863450 - L1ME3A LINE L1 -513 5649 5100 1478 173 10 70 chr17 16575180 16575480 -68863000 - AluJo SINE Alu -30 282 1 554 302 108 50 chr17 16575502 16575599 -68862881 - L2 LINE L2 -1 3312 3222 2307 88 7 13 chr17 16575599 16575906 -68862574 + AluSg SINE Alu 1 305 -5 554 302 108 50 chr17 16575906 16576225 -68862255 - L2 LINE L2 -91 3222 2872 296 292 77 31 chr17 16576236 16576366 -68862114 - L1MEd LINE L1 -5328 791 656 383 259 170 0 chr17 16576714 16576849 -68861631 - L1MEd LINE L1 -5919 200 43 239 214 169 34 chr17 16577178 16577267 -68861213 - L1ME3A LINE L1 -2305 3841 3741 2949 105 28 5 chr17 16577878 16578306 -68860174 + MER75 DNA T2_type 72 509 -5 2482 63 0 31 chr17 16578781 16579098 -68859382 - AluY SINE Alu -4 307 1 194 357 206 0 chr17 16582740 16582866 -68855614 + MER5B DNA MER1_type 7 158 -20 252 0 0 0 chr17 16583312 16583340 -68855140 + (A)n Simple_repeat Simple_repeat 1 28 0 25 0 0 0 chr17 16583664 16583689 -68854791 + AT_rich Low_complexity Low_complexity 1 25 0 3069 114 33 2 chr17 16584447 16584868 -68853612 - Tigger2a DNA MER2_type 0 434 1 232 266 216 10 chr17 16585169 16585298 -68853182 + MIR SINE MIR 2 155 -53 2324 68 38 0 chr17 16587557 16587849 -68850631 + AluSp SINE Alu 1 303 -10 916 132 0 132 chr17 16588301 16588490 -68849990 - AluSg/x SINE Alu -14 298 135 1543 159 24 64 chr17 16588810 16589105 -68849375 + AluJb SINE Alu 7 289 -23 12503 121 91 5 chr17 16589604 16590021 -68848459 - Tigger1 DNA MER2_type -223 2195 1815 1930 150 6 29 chr17 16590021 16590335 -68848145 - AluJb SINE Alu -5 307 1 12503 121 91 5 chr17 16590335 16591939 -68846541 - Tigger1 DNA MER2_type -603 1815 1 261 157 112 56 chr17 16592623 16592712 -68845768 - HAL1b LINE L1 -256 1092 999 1825 143 4 7 chr17 16592929 16593208 -68845272 - AluJb SINE Alu -11 301 24 2316 81 0 0 chr17 16593279 16593562 -68844918 - AluSc SINE Alu -26 283 1 2209 89 7 10 chr17 16594290 16594583 -68843897 - AluSx SINE Alu -20 292 1 193 237 0 0 chr17 16594842 16594880 -68843600 + L2 LINE L2 3267 3304 -9 334 70 0 0 chr17 16595142 16595193 -68843287 - Alu SINE Alu -8 294 253 662 170 14 71 chr17 16595242 16595383 -68843097 + FLAM_A SINE Alu 1 133 0 2252 112 0 13 chr17 16595895 16596208 -68842272 - AluSq SINE Alu -4 309 1 186 71 0 0 chr17 16596217 16596245 -68842235 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2247 82 7 0 chr17 16596245 16596527 -68841953 - AluY SINE Alu -27 284 1 184 111 0 0 chr17 16596986 16597013 -68841467 + MER5B DNA MER1_type 21 47 -131 941 318 76 12 chr17 16597229 16597729 -68840751 - L2 LINE L2 -894 2420 1889 2302 104 3 0 chr17 16598381 16598690 -68839790 + AluSx SINE Alu 1 310 -2 857 246 79 4 chr17 16599749 16599977 -68838503 + MIR SINE MIR 18 262 0 2048 141 10 7 chr17 16599992 16600297 -68838183 - AluSx SINE Alu -4 308 3 1624 164 22 7 chr17 16600312 16600586 -68837894 - AluJo SINE Alu -14 298 21 209 138 69 52 chr17 16600833 16600891 -68837589 + L3 LINE CR1 939 997 -580 412 287 170 65 chr17 16600979 16601362 -68837118 + L3 LINE CR1 1135 1557 -20 190 297 9 63 chr17 16602548 16602659 -68835821 + MIR SINE MIR 20 124 -138 280 195 98 65 chr17 16602915 16603038 -68835442 + MIR SINE MIR 130 256 -6 21 36 0 0 chr17 16603133 16603161 -68835319 + AT_rich Low_complexity Low_complexity 1 28 0 2034 96 41 24 chr17 16604079 16604370 -68834110 - AluSx SINE Alu -16 296 1 1408 133 44 121 chr17 16604390 16604705 -68833775 - AluJo SINE Alu -17 295 5 2128 138 0 0 chr17 16604719 16605016 -68833464 - AluSx SINE Alu -15 297 1 273 276 76 21 chr17 16605158 16605303 -68833177 - HAL1 LINE L1 -117 2390 2238 1781 168 3 19 chr17 16605317 16605626 -68832854 - AluJo SINE Alu -2 310 7 307 228 114 81 chr17 16605698 16605821 -68832659 - HAL1b LINE L1 -473 875 749 10785 163 57 16 chr17 16605843 16606127 -68832353 + L1PA13 LINE L1 2825 3096 -3050 2071 100 7 4 chr17 16606127 16606436 -68832044 + AluSp SINE Alu 5 314 0 10785 163 57 16 chr17 16606436 16606505 -68831975 + L1PA13 LINE L1 3096 3161 -2985 2289 67 0 51 chr17 16606505 16606817 -68831663 - AluY SINE Alu -15 296 1 10785 163 57 16 chr17 16606817 16608884 -68829596 + L1PA13 LINE L1 3161 5331 -815 742 190 0 15 chr17 16608884 16609021 -68829459 + AluJb SINE Alu 139 273 -39 5673 81 7 24 chr17 16609021 16609141 -68829339 + L1PA13 LINE L1 5316 5437 -726 2073 147 0 7 chr17 16609141 16609441 -68829039 + AluSx SINE Alu 1 298 -14 5673 81 7 24 chr17 16609441 16610183 -68828297 + L1PA13 LINE L1 5437 6159 -4 544 241 0 38 chr17 16610394 16610552 -68827928 + L1MC5 LINE L1 7756 7907 -54 2083 98 25 35 chr17 16610794 16611109 -68827371 - AluSx SINE Alu 0 312 1 330 206 0 0 chr17 16611341 16611414 -68827066 + (TA)n Simple_repeat Simple_repeat 1 73 0 906 160 0 0 chr17 16611502 16611627 -68826853 - FLAM_C SINE Alu -18 125 1 2422 87 3 10 chr17 16613258 16613570 -68824910 + AluSp SINE Alu 1 310 -3 30 0 0 0 chr17 16617655 16617685 -68820795 + AT_rich Low_complexity Low_complexity 1 30 0 1604 182 3 17 chr17 16617685 16617976 -68820504 - AluJo SINE Alu -25 287 1 275 203 0 14 chr17 16617978 16618047 -68820433 - L1ME LINE L1 -454 5667 5600 229 182 0 0 chr17 16618602 16618646 -68819834 + CT-rich Low_complexity Low_complexity 3 46 0 2123 130 0 9 chr17 16618811 16619126 -68819354 + AluSx SINE Alu 1 312 0 221 121 0 0 chr17 16619888 16619921 -68818559 - L2 LINE L2 -2 3311 3279 936 233 18 18 chr17 16620647 16620870 -68817610 - MER58A DNA MER1_type 0 224 2 573 209 37 0 chr17 16622198 16622332 -68816148 + L1ME3A LINE L1 6032 6170 0 2195 104 7 13 chr17 16623209 16623508 -68814972 - AluSc SINE Alu -12 297 1 623 115 0 26 chr17 16623517 16623630 -68814850 - L1MB3 LINE L1 0 6183 6074 793 290 45 9 chr17 16624093 16624314 -68814166 - MIR SINE MIR -3 259 31 21 0 0 0 chr17 16624597 16624618 -68813862 + AT_rich Low_complexity Low_complexity 1 21 0 1902 105 4 0 chr17 16625241 16625489 -68812991 + AluSp SINE Alu 1 249 -64 1721 143 15 8 chr17 16625492 16625758 -68812722 + AluJb SINE Alu 1 268 -44 490 122 138 49 chr17 16626161 16626284 -68812196 + L1MB3 LINE L1 6048 6181 -2 23 0 0 0 chr17 16628146 16628169 -68810311 + AT_rich Low_complexity Low_complexity 1 23 0 519 350 72 45 chr17 16628218 16628661 -68809819 - L2 LINE L2 -1 3271 2817 2351 64 0 32 chr17 16629359 16629670 -68808810 - AluY SINE Alu -10 301 1 279 331 83 6 chr17 16629789 16629946 -68808534 - MIR SINE MIR -5 257 89 6819 99 45 26 chr17 16630532 16631601 -68806879 + HSMAR1 DNA Mariner 1 1089 -198 1970 142 6 22 chr17 16631608 16631925 -68806555 + AluSx SINE Alu 1 312 0 835 171 0 11 chr17 16631939 16632114 -68806366 + G-rich Low_complexity Low_complexity 5 177 0 200 154 77 0 chr17 16632114 16632153 -68806327 + A-rich Low_complexity Low_complexity 4 45 0 1257 100 42 0 chr17 16632153 16632343 -68806137 + HSMAR1 DNA Mariner 1090 1287 0 2461 72 0 0 chr17 16633074 16633367 -68805113 - AluSg SINE Alu -17 293 1 320 229 21 42 chr17 16633494 16633590 -68804890 - MER5A DNA MER1_type -83 106 13 264 313 28 56 chr17 16633590 16633734 -68804746 + MER5A DNA MER1_type 27 166 -23 * 745 252 6 0 chr17 16633609 16633768 -68804712 - MER5A DNA MER1_type -29 160 1 24 53 0 0 chr17 16634821 16634859 -68803621 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr17 16635311 16635333 -68803147 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 16635395 16635418 -68803062 + AT_rich Low_complexity Low_complexity 1 23 0 330 182 40 50 chr17 16635568 16635667 -68802813 + L1ME2 LINE L1 2 99 -6443 820 127 0 0 chr17 16635689 16635807 -68802673 - AluSg/x SINE Alu 0 309 192 4466 205 70 42 chr17 16635807 16636926 -68801554 + L1ME2 LINE L1 83 1241 -5301 1462 211 32 23 chr17 16636926 16637234 -68801246 + AluJo SINE Alu 1 311 -1 4466 205 70 42 chr17 16637234 16637340 -68801140 + L1ME2 LINE L1 1241 1343 -5199 416 296 38 13 chr17 16637355 16637514 -68800966 + L1ME2 LINE L1 4455 4617 -2027 1748 87 0 13 chr17 16637519 16637748 -68800732 + AluSc SINE Alu 76 301 -8 613 141 0 0 chr17 16637748 16637834 -68800646 + AluJo/FRAM SINE Alu 163 248 -64 400 220 165 11 chr17 16637876 16638058 -68800422 + L1ME2 LINE L1 4897 5106 -1538 207 100 0 0 chr17 16638420 16638450 -68800030 + (GAAAA)n Simple_repeat Simple_repeat 3 32 0 2575 210 109 18 chr17 16638948 16640317 -68798163 + L1ME2 LINE L1 5121 6607 -55 350 340 77 6 chr17 16642922 16643078 -68795402 - L1M4 LINE L1 -1824 4322 4156 392 201 227 46 chr17 16643147 16643341 -68795139 - MIR SINE MIR -33 229 1 488 256 29 17 chr17 16645796 16645937 -68792543 - MIR SINE MIR -64 144 45 1653 137 30 19 chr17 16646709 16646972 -68791508 + AluSx SINE Alu 9 274 -38 441 0 0 0 chr17 16647141 16647190 -68791290 + (TA)n Simple_repeat Simple_repeat 1 49 0 2159 128 0 16 chr17 16647190 16647496 -68790984 - AluSx SINE Alu -10 302 2 600 274 102 30 chr17 16647497 16647800 -68790680 + L2 LINE L2 2184 2508 -806 1587 153 33 43 chr17 16648397 16648698 -68789782 - AluJo SINE Alu -14 298 1 5336 79 24 60 chr17 16649039 16649929 -68788551 + SVA Other Other 9 866 -520 5700 46 45 25 chr17 16650192 16650928 -68787552 + SVA Other Other 635 1385 -1 1119 152 52 0 chr17 16651452 16651663 -68786817 + L1MB2 LINE L1 5707 5928 -255 526 241 53 23 chr17 16651724 16651857 -68786623 + MER21B LTR ERV1 60 196 -667 370 150 39 127 chr17 16651881 16651991 -68786489 - FLAM_A SINE Alu -27 106 21 2107 204 51 62 chr17 16651992 16652625 -68785855 + MER21B LTR ERV1 184 809 -54 749 199 51 51 chr17 16652642 16652878 -68785602 + L1MB2 LINE L1 5929 6164 -7 567 188 30 0 chr17 16653310 16653411 -68785069 + U6 snRNA snRNA 1 104 -3 372 357 13 9 chr17 16653580 16653835 -68784645 + Charlie8 DNA MER1_type 38 1390 -1027 21 0 0 0 chr17 16654826 16654847 -68783633 + AT_rich Low_complexity Low_complexity 1 21 0 2167 115 7 0 chr17 16654966 16655261 -68783219 + AluSx SINE Alu 2 298 -14 406 184 31 0 chr17 16656779 16656877 -68781603 - MER33 DNA MER1_type 0 324 224 1279 95 0 22 chr17 16656881 16657060 -68781420 - AluSp SINE Alu -9 304 130 810 155 38 66 chr17 16657070 16657205 -68781275 - MER33 DNA MER1_type -2373 212 84 2162 112 0 0 chr17 16657205 16657500 -68780980 - AluSx SINE Alu -17 295 1 810 155 38 66 chr17 16657500 16657577 -68780903 - MER33 DNA MER1_type -2501 84 6 591 315 162 43 chr17 16657691 16658340 -68780140 + L2 LINE L2 2292 3100 -213 1806 121 61 0 chr17 16658340 16658604 -68779876 + AluSp SINE Alu 1 280 -33 591 315 162 43 chr17 16658604 16658838 -68779642 + L2 LINE L2 3100 3305 -8 24 32 0 0 chr17 16658883 16658914 -68779566 + AT_rich Low_complexity Low_complexity 1 31 0 1037 279 118 23 chr17 16658942 16659095 -68779385 - L2 LINE L2 0 3313 3176 1717 170 7 17 chr17 16659095 16659395 -68779085 + AluJo SINE Alu 1 297 -15 1037 279 118 23 chr17 16659395 16659840 -68778640 - L2 LINE L2 -137 3176 2662 1147 178 0 33 chr17 16659842 16660056 -68778424 + AluJo SINE Alu 106 312 0 431 279 32 25 chr17 16660158 16660316 -68778164 - L2 LINE L2 -900 2414 2256 279 0 0 0 chr17 16660327 16660358 -68778122 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2169 106 0 0 chr17 16660424 16660736 -68777744 + AluSq SINE Alu 1 312 0 270 0 0 0 chr17 16661461 16661491 -68776989 + (TA)n Simple_repeat Simple_repeat 2 31 0 2512 48 7 10 chr17 16661491 16661801 -68776679 - AluY SINE Alu -2 309 1 1451 207 35 29 chr17 16661833 16662209 -68776271 + MLT1B LTR MaLR 1 378 -12 221 196 0 0 chr17 16663196 16663242 -68775238 + L2 LINE L2 3268 3313 0 23 68 0 0 chr17 16663839 16663883 -68774597 + AT_rich Low_complexity Low_complexity 1 44 0 436 266 82 88 chr17 16663909 16664263 -68774217 - L1ME4a LINE L1 -79 6042 5691 2299 102 0 0 chr17 16664343 16664638 -68773842 - AluSg1 SINE Alu -14 295 1 1680 180 14 3 chr17 16664693 16664988 -68773492 + AluJb SINE Alu 15 312 0 341 221 0 0 chr17 16665576 16665653 -68772827 - FLAM_A SINE Alu 0 133 57 2144 112 0 31 chr17 16665926 16666248 -68772232 + AluSx SINE Alu 1 312 0 512 243 29 86 chr17 16666248 16666458 -68772022 + MLT2D LTR ERVL 217 414 0 2328 100 0 0 chr17 16666465 16666775 -68771705 - AluY SINE Alu -1 310 1 4364 190 49 65 chr17 16667041 16667103 -68771377 - Charlie1a DNA MER1_type -1312 1449 1388 2263 92 17 0 chr17 16667103 16667395 -68771085 - AluSc SINE Alu -12 297 1 4364 190 49 65 chr17 16667395 16667519 -68770961 - Charlie1a DNA MER1_type -1373 1388 1264 2269 89 0 17 chr17 16667519 16667821 -68770659 - AluY SINE Alu -14 297 1 4364 190 49 65 chr17 16667821 16668217 -68770263 - Charlie1a DNA MER1_type -1497 1264 863 2360 108 0 0 chr17 16668217 16668523 -68769957 + AluSx SINE Alu 1 306 -6 4364 190 49 65 chr17 16668523 16668593 -68769887 - Charlie1a DNA MER1_type -1898 863 793 2284 101 32 61 chr17 16668593 16668968 -68769512 - THE1B LTR MaLR 0 364 1 11609 95 14 0 chr17 16668968 16670526 -68767954 - THE1B-int LTR MaLR 0 1580 2 2248 121 30 28 chr17 16670527 16670890 -68767590 - THE1B LTR MaLR 0 364 1 4364 190 49 65 chr17 16670890 16671658 -68766822 - Charlie1a DNA MER1_type -1966 795 45 180 0 0 0 chr17 16672121 16672141 -68766339 + (A)n Simple_repeat Simple_repeat 1 20 0 2129 116 3 0 chr17 16672147 16672431 -68766049 + AluSx SINE Alu 1 285 -27 218 311 14 0 chr17 16673185 16673259 -68765221 + (TA)n Simple_repeat Simple_repeat 2 76 0 296 252 0 28 chr17 16673486 16673574 -68764906 - MIR SINE MIR -115 93 9 225 0 0 0 chr17 16674592 16674617 -68763863 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 299 327 93 23 chr17 16674748 16675048 -68763432 + L2 LINE L2 2550 2870 -444 444 304 75 60 chr17 16675127 16675393 -68763087 + L1ME1 LINE L1 5550 5819 -302 218 297 40 54 chr17 16676241 16676315 -68762165 + MIR3 SINE MIR 105 177 -31 936 234 63 13 chr17 16676438 16676677 -68761803 + MIR SINE MIR 12 262 0 334 319 143 49 chr17 16677038 16677232 -68761248 + L2 LINE L2 1883 2057 -1257 1700 174 41 10 chr17 16677232 16677525 -68760955 - AluJb SINE Alu -4 308 7 334 319 143 49 chr17 16677525 16678029 -68760451 + L2 LINE L2 2057 2647 -667 1262 203 95 16 chr17 16678845 16679160 -68759320 + L1ME1 LINE L1 5810 6149 -17 2190 122 3 0 chr17 16679688 16679992 -68758488 + AluSx SINE Alu 1 305 -7 2378 83 7 0 chr17 16680029 16680329 -68758151 + AluY SINE Alu 1 302 -9 1814 125 69 10 chr17 16680334 16680637 -68757843 + L1PB4 LINE L1 5834 6154 -2 25 65 0 0 chr17 16680637 16680683 -68757797 + AT_rich Low_complexity Low_complexity 1 46 0 408 200 0 0 chr17 16680694 16680794 -68757686 + CT-rich Low_complexity Low_complexity 2 101 0 1044 170 43 25 chr17 16681483 16681718 -68756762 + MER44D DNA MER2_type 1 509 -100 423 194 0 0 chr17 16681718 16681811 -68756669 + (TA)n Simple_repeat Simple_repeat 1 93 0 995 143 11 0 chr17 16681820 16681995 -68756485 + (TATG)n Simple_repeat Simple_repeat 2 178 0 307 292 0 0 chr17 16681995 16682075 -68756405 + L1MC4 LINE L1 6621 6703 -1339 241 315 0 0 chr17 16682095 16682184 -68756296 - L1MC4 LINE L1 -1339 6703 6615 339 300 0 0 chr17 16682215 16682305 -68756175 + L1MC4 LINE L1 6614 6703 -1339 273 197 0 0 chr17 16682306 16682367 -68756113 + (TA)n Simple_repeat Simple_repeat 1 61 0 599 124 11 0 chr17 16682371 16682460 -68756020 + MER44D DNA MER2_type 614 703 -2 830 183 0 14 chr17 16682460 16682602 -68755878 - AluJo/FRAM SINE Alu -16 296 157 465 193 12 0 chr17 16682602 16682685 -68755795 - AluS SINE Alu -228 84 1 232 338 95 65 chr17 16682770 16683170 -68755310 + L2 LINE L2 2856 3267 -5 1994 151 0 22 chr17 16685276 16685593 -68752887 - AluJb SINE Alu 0 312 3 1514 145 6 116 chr17 16685595 16685932 -68752548 - AluJb SINE Alu -2 300 1 298 300 70 45 chr17 16686412 16686614 -68751866 - MIR SINE MIR 0 262 55 342 138 0 38 chr17 16687483 16687563 -68750917 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 2041 167 0 0 chr17 16687563 16687875 -68750605 - AluSx SINE Alu 0 312 1 1640 230 108 38 chr17 16688228 16688749 -68749731 + L2 LINE L2 2235 2791 -523 2507 66 0 0 chr17 16689484 16689789 -68748691 + AluY SINE Alu 1 305 -6 270 291 166 20 chr17 16690026 16690301 -68748179 + L2 LINE L2 1658 2015 -1299 1861 146 0 23 chr17 16690795 16691096 -68747384 - AluJo SINE Alu -16 296 3 2429 74 0 10 chr17 16691131 16691443 -68747037 + AluSc SINE Alu 1 309 0 26 88 0 0 chr17 16691718 16691786 -68746694 + AT_rich Low_complexity Low_complexity 1 68 0 22 35 0 0 chr17 16692057 16692086 -68746394 + AT_rich Low_complexity Low_complexity 1 29 0 754 68 29 10 chr17 16692376 16692479 -68746001 - U6 snRNA snRNA -2 105 1 2180 130 0 0 chr17 16692909 16693210 -68745270 + AluSx SINE Alu 1 301 -11 352 296 70 14 chr17 16693254 16693396 -68745084 - MER5B DNA MER1_type -27 151 2 21 0 0 0 chr17 16693592 16693613 -68744867 + AT_rich Low_complexity Low_complexity 1 21 0 1597 162 6 88 chr17 16694989 16695138 -68743342 + AluJb SINE Alu 2 112 -200 2061 121 0 0 chr17 16695138 16695447 -68743033 + AluSx SINE Alu 1 309 0 1597 162 6 88 chr17 16695447 16695624 -68742856 + AluJb SINE Alu 112 302 -10 374 304 39 0 chr17 16696305 16696407 -68742073 + L2 LINE L2 3204 3309 -4 626 286 65 23 chr17 16696418 16696635 -68741845 + MIR SINE MIR 3 228 -34 21 0 0 0 chr17 16698977 16698998 -68739482 + AT_rich Low_complexity Low_complexity 1 21 0 1296 91 29 38 chr17 16699051 16699261 -68739219 - L1PA13 LINE L1 -4 6159 5952 231 114 57 29 chr17 16699315 16699385 -68739095 + CT-rich Low_complexity Low_complexity 2 73 0 8702 84 21 67 chr17 16699480 16700930 -68737550 + SVA Other Other 3 1386 0 251 175 48 0 chr17 16701599 16701662 -68736818 - L1ME LINE L1 -350 5771 5706 2188 99 48 0 chr17 16701735 16702029 -68736451 + AluSg SINE Alu 1 308 -2 2177 105 7 0 chr17 16702429 16702723 -68735757 - AluSp SINE Alu -17 296 1 243 0 0 0 chr17 16703270 16703297 -68735183 + (A)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr17 16703899 16703923 -68734557 + (TA)n Simple_repeat Simple_repeat 2 25 0 39 22 0 0 chr17 16705628 16705674 -68732806 + AT_rich Low_complexity Low_complexity 1 46 0 23 0 0 0 chr17 16705802 16705825 -68732655 + AT_rich Low_complexity Low_complexity 1 23 0 5868 46 1 3 chr17 16706765 16707483 -68730997 - L1PA6 LINE L1 -6 6148 5432 973 200 0 0 chr17 16708631 16708796 -68729684 - FRAM SINE Alu 0 166 2 212 357 57 0 chr17 16708968 16709038 -68729442 - L2 LINE L2 -16 3256 3183 2260 117 3 0 chr17 16709676 16709976 -68728504 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 16709977 16710004 -68728476 + (CA)n Simple_repeat Simple_repeat 2 28 0 239 261 14 14 chr17 16710604 16710617 -68727863 + A-rich Low_complexity Low_complexity 3 15 -129 661 205 31 0 chr17 16710617 16710744 -68727736 + FLAM_C SINE Alu 1 131 -2 239 261 14 14 chr17 16710744 16710760 -68727720 + A-rich Low_complexity Low_complexity 15 30 -114 2117 151 0 0 chr17 16710760 16711071 -68727409 + AluSx SINE Alu 1 311 -1 239 261 14 14 chr17 16711071 16711182 -68727298 + A-rich Low_complexity Low_complexity 29 144 0 233 237 145 61 chr17 16711668 16711799 -68726681 + Charlie8 DNA MER1_type 6 147 -2270 180 0 0 0 chr17 16712065 16712085 -68726395 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 191 298 32 21 chr17 16712345 16712439 -68726041 - L3 LINE CR1 -170 1407 1313 2183 118 0 3 chr17 16712583 16712880 -68725600 - AluSx SINE Alu -16 296 1 23 78 0 0 chr17 16713116 16713167 -68725313 + AT_rich Low_complexity Low_complexity 1 51 0 2486 82 3 0 chr17 16713738 16714042 -68724438 + AluSp SINE Alu 1 305 -8 2178 90 31 7 chr17 16714448 16714738 -68723742 - AluSx SINE Alu -15 297 1 261 195 24 37 chr17 16714772 16714854 -68723626 + MIR SINE MIR 128 208 -54 330 281 21 10 chr17 16714904 16715000 -68723480 + L2 LINE L2 3213 3309 -4 2043 132 3 3 chr17 16715116 16715405 -68723075 + AluSx SINE Alu 1 289 -23 304 95 48 0 chr17 16715489 16715531 -68722949 + MER57A LTR ERV1 295 338 -65 29 0 0 0 chr17 16715532 16715561 -68722919 + AT_rich Low_complexity Low_complexity 1 29 0 435 19 0 0 chr17 16715827 16715879 -68722601 + (CA)n Simple_repeat Simple_repeat 2 53 0 2242 93 3 22 chr17 16715890 16716202 -68722278 - AluSq SINE Alu -7 306 1 24 32 0 0 chr17 16716244 16716275 -68722205 + AT_rich Low_complexity Low_complexity 1 31 0 203 100 0 25 chr17 16716574 16716614 -68721866 + (GAAAA)n Simple_repeat Simple_repeat 4 42 0 21 0 0 0 chr17 16716695 16716716 -68721764 + AT_rich Low_complexity Low_complexity 1 21 0 675 267 95 22 chr17 16716733 16717048 -68721432 + L1MEd LINE L1 982 1319 -4886 267 255 57 85 chr17 16717266 16717478 -68721002 + L1MEd LINE L1 1615 1820 -4576 3937 186 51 9 chr17 16717639 16718717 -68719763 + L1MB7 LINE L1 4997 6115 -69 1042 102 0 20 chr17 16718718 16718865 -68719615 + AluSc SINE Alu 152 295 -14 337 298 196 27 chr17 16719012 16719318 -68719162 + L1ME LINE L1 5319 5681 -481 2271 110 0 3 chr17 16721005 16721305 -68717175 + AluSg SINE Alu 1 299 -11 180 200 0 0 chr17 16721746 16721776 -68716704 + MER5A DNA MER1_type 145 174 -15 209 204 0 37 chr17 16721871 16721925 -68716555 - L2 LINE L2 -69 3244 3193 21 0 0 0 chr17 16722060 16722081 -68716399 + AT_rich Low_complexity Low_complexity 1 21 0 2363 93 0 0 chr17 16722186 16722486 -68715994 + AluSx SINE Alu 3 302 -10 497 271 102 62 chr17 16722588 16722804 -68715676 + L1ME LINE L1 5283 5522 -599 2428 86 0 0 chr17 16722804 16723107 -68715373 - AluSq SINE Alu -10 303 1 497 271 102 62 chr17 16723107 16723274 -68715206 + L1ME LINE L1 5522 5681 -440 2261 97 24 0 chr17 16723295 16723585 -68714895 + AluSx SINE Alu 1 297 -15 1192 133 0 0 chr17 16723764 16723937 -68714543 + AluSg/x SINE Alu 134 306 -4 286 235 103 37 chr17 16724063 16724199 -68714281 + HAL1 LINE L1 2007 2151 -356 414 194 121 16 chr17 16724213 16724337 -68714143 + HAL1 LINE L1 2248 2384 -123 2324 76 7 0 chr17 16724338 16724627 -68713853 + AluY SINE Alu 1 291 -20 2505 80 0 10 chr17 16724638 16724949 -68713531 + AluSc SINE Alu 1 308 -1 312 251 167 26 chr17 16725082 16725309 -68713171 - L1ME4a LINE L1 -41 6080 5822 773 306 76 48 chr17 16726011 16726574 -68711906 - L2 LINE L2 -1 3312 2736 1590 269 169 15 chr17 16726574 16727228 -68711252 - L2 LINE L2 -712 2602 1838 2667 191 109 44 chr17 16727228 16727915 -68710565 + MER44D DNA MER2_type 1 604 -1 1590 269 169 15 chr17 16727915 16727940 -68710540 - L2 LINE L2 -1476 1838 1818 220 302 16 0 chr17 16727957 16728020 -68710460 + L2 LINE L2 3233 3296 -17 2400 105 0 0 chr17 16728669 16728982 -68709498 - AluSq SINE Alu 0 313 1 258 263 0 53 chr17 16731545 16731621 -68706859 + MLT1J LTR MaLR 1 72 -439 1182 177 40 0 chr17 16731621 16731654 -68706826 + AluJb SINE Alu 87 117 -195 297 0 0 0 chr17 16731654 16731687 -68706793 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 1182 177 40 0 chr17 16731687 16731851 -68706629 + AluJb SINE Alu 117 292 -20 464 241 194 61 chr17 16731877 16732222 -68706258 + MLT1J LTR MaLR 121 511 0 2149 128 7 0 chr17 16732633 16732937 -68705543 + AluSx SINE Alu 1 306 -6 236 224 0 0 chr17 16733301 16733350 -68705130 - L2 LINE L2 -4 3268 3220 498 237 65 7 chr17 16733371 16733510 -68704970 + MLT1J LTR MaLR 115 261 -250 706 316 113 40 chr17 16733606 16734452 -68704028 - L2 LINE L2 -219 3053 2148 217 135 19 39 chr17 16735021 16735073 -68703407 + C-rich Low_complexity Low_complexity 3 53 0 21 36 0 0 chr17 16735192 16735220 -68703260 + GC_rich Low_complexity Low_complexity 1 28 0 2533 63 0 3 chr17 16736054 16736354 -68702126 + AluSq SINE Alu 1 299 -14 2235 105 3 0 chr17 16736995 16737289 -68701191 - AluSg SINE Alu -15 295 1 1233 263 80 51 chr17 16737477 16737940 -68700540 - HAL1 LINE L1 -291 2216 1768 1745 164 27 17 chr17 16737940 16738233 -68700247 - AluJo SINE Alu -16 296 1 1519 136 0 0 chr17 16738242 16738455 -68700025 - AluJb SINE Alu -13 299 87 1233 263 80 51 chr17 16738455 16738529 -68699951 - HAL1 LINE L1 -746 1761 1653 412 162 0 0 chr17 16738529 16738597 -68699883 - AluJo SINE Alu -13 299 232 856 153 14 0 chr17 16738601 16738745 -68699735 - AluJo SINE Alu -166 146 1 1528 81 27 27 chr17 16738780 16739001 -68699479 - AluSp SINE Alu -7 306 86 2985 217 123 119 chr17 16739015 16739512 -68698968 - HAL1 LINE L1 -864 1643 1149 700 127 0 97 chr17 16739512 16739549 -68698931 - FLAM_A SINE Alu -169 142 103 2388 79 21 0 chr17 16739549 16739839 -68698641 + AluSp SINE Alu 2 297 -16 700 127 0 97 chr17 16739839 16739935 -68698545 - FLAM_A SINE Alu -208 103 22 2985 217 123 119 chr17 16739935 16740857 -68697623 - HAL1 LINE L1 -1358 1149 83 2155 128 0 13 chr17 16740857 16741161 -68697319 + AluSx SINE Alu 1 300 -12 2985 217 123 119 chr17 16741161 16741231 -68697249 - HAL1 LINE L1 -2424 83 15 2207 106 0 3 chr17 16741444 16741773 -68696707 + AluSc SINE Alu 1 328 0 754 153 0 16 chr17 16741786 16741910 -68696570 + FLAM_C SINE Alu 3 124 -19 1956 151 10 10 chr17 16741932 16742236 -68696244 + AluSx SINE Alu 1 304 -8 2284 110 3 0 chr17 16742371 16742670 -68695810 + AluSp SINE Alu 1 300 -13 2341 81 0 3 chr17 16742883 16743211 -68695269 + AluSx SINE Alu 1 327 0 685 143 29 0 chr17 16743217 16743322 -68695158 + FRAM SINE Alu 52 159 -17 21 36 0 0 chr17 16743419 16743447 -68695033 + AT_rich Low_complexity Low_complexity 1 28 0 534 234 52 75 chr17 16743681 16743988 -68694492 + L1ME4a LINE L1 5598 5897 -224 1058 151 235 8 chr17 16743989 16744227 -68694253 - AluSg1 SINE Alu -17 292 1 326 122 0 14 chr17 16744546 16744609 -68693871 + Alu SINE Alu 1 44 -258 1002 130 0 0 chr17 16744609 16744772 -68693708 + AluSg/x SINE Alu 144 306 0 315 240 48 122 chr17 16744797 16744872 -68693608 - L1ME4a LINE L1 -68 6053 5974 2493 74 0 0 chr17 16744872 16745171 -68693309 - AluY SINE Alu -12 299 1 315 240 48 122 chr17 16745171 16745202 -68693278 - L1ME4a LINE L1 -147 5974 5942 1373 183 90 24 chr17 16745202 16745492 -68692988 + AluJo SINE Alu 1 309 -3 2026 128 3 3 chr17 16745492 16745788 -68692692 + AluSx SINE Alu 1 296 -16 315 240 48 122 chr17 16745788 16745950 -68692530 - L1ME4a LINE L1 -177 5944 5803 2305 97 7 3 chr17 16746065 16746373 -68692107 - AluSx SINE Alu -3 309 1 891 154 0 0 chr17 16746444 16746574 -68691906 - FLAM_C SINE Alu 0 133 4 315 241 139 30 chr17 16746581 16746901 -68691579 + L1MB8 LINE L1 5564 5924 -254 182 233 17 0 chr17 16746972 16747032 -68691448 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 31 20 0 20 chr17 16747180 16747200 -68691280 + AT_rich Low_complexity Low_complexity 1 20 -28 2325 90 3 0 chr17 16747200 16747488 -68690992 + AluSp SINE Alu 1 289 -24 31 20 0 20 chr17 16747488 16747516 -68690964 + AT_rich Low_complexity Low_complexity 20 48 0 2147 124 24 73 chr17 16748009 16748198 -68690282 - L1MA8 LINE L1 -1 6290 6093 819 146 8 15 chr17 16748198 16748328 -68690152 - FLAM_C SINE Alu -1 132 4 2147 124 24 73 chr17 16748328 16748495 -68689985 - L1MA8 LINE L1 -198 6093 5958 899 132 0 22 chr17 16748495 16748631 -68689849 - FLAM_C SINE Alu 0 133 1 2147 124 24 73 chr17 16748631 16748723 -68689757 - L1MA8 LINE L1 -333 5958 5863 2233 96 7 0 chr17 16748766 16749079 -68689401 + AluSq SINE Alu 1 315 0 2239 114 3 0 chr17 16749788 16750087 -68688393 - AluSx SINE Alu -12 300 1 756 264 41 15 chr17 16750124 16750436 -68688044 - MLT1I LTR MaLR 0 409 63 181 313 16 16 chr17 16750761 16750825 -68687655 + MIR3 SINE MIR 124 187 -21 2144 133 0 0 chr17 16751223 16751516 -68686964 + AluSx SINE Alu 1 293 -19 2424 102 0 0 chr17 16751741 16752045 -68686435 - AluSg SINE Alu -6 304 1 1769 176 3 13 chr17 16752157 16752464 -68686016 + AluJo SINE Alu 1 304 -8 1704 146 24 37 chr17 16753189 16753484 -68684996 - AluJb SINE Alu -21 291 1 680 40 0 10 chr17 16754958 16755059 -68683421 + SVA Other Other 767 866 -520 6662 63 5 94 chr17 16755076 16756134 -68682346 + SVA Other Other 433 1386 0 28 0 0 0 chr17 16756134 16756162 -68682318 + AT_rich Low_complexity Low_complexity 1 28 0 2195 123 7 0 chr17 16756494 16756794 -68681686 - AluSx SINE Alu -10 302 1 2394 76 0 17 chr17 16757390 16757692 -68680788 - AluY SINE Alu -14 297 1 404 274 115 37 chr17 16757730 16758000 -68680480 + L3 LINE CR1 761 1051 -526 193 332 133 20 chr17 16758028 16758374 -68680106 + L3 LINE CR1 1154 1538 -39 390 21 0 0 chr17 16758964 16759011 -68679469 + (TA)n Simple_repeat Simple_repeat 1 47 0 2140 116 33 3 chr17 16759014 16759315 -68679165 - AluSg SINE Alu 0 310 1 546 160 50 57 chr17 16760713 16760792 -68677688 + MER6 DNA MER2_type -63 15 -850 2222 145 9 52 chr17 16760792 16761213 -68677267 + MER57A LTR ERV1 1 403 0 546 160 50 57 chr17 16761213 16761292 -68677188 + MER6 DNA MER2_type 15 843 -22 1674 112 146 3 chr17 16761362 16761657 -68676823 - MER1B DNA MER1_type 0 337 1 390 260 169 45 chr17 16761657 16761899 -68676581 - L2 LINE L2 -52 3261 2990 1518 139 0 34 chr17 16762124 16762361 -68676119 + AluJb SINE Alu 76 304 -8 385 255 49 0 chr17 16763064 16763166 -68675314 + L2 LINE L2 3185 3291 -22 2240 122 0 10 chr17 16763177 16763480 -68675000 + AluSx SINE Alu 1 300 -12 1040 285 88 35 chr17 16764000 16764453 -68674027 + MLT1L LTR MaLR 121 597 -18 195 214 54 36 chr17 16764453 16764509 -68673971 - MIR3 SINE MIR -27 181 125 198 267 307 0 chr17 16764893 16764968 -68673512 - L2 LINE L2 -38 3234 3137 626 314 163 6 chr17 16765220 16765564 -68672916 - L2 LINE L2 -559 2755 2358 2207 102 3 13 chr17 16765628 16765941 -68672539 - AluY SINE Alu -1 310 1 259 339 107 8 chr17 16766325 16766446 -68672034 - MIR SINE MIR -96 166 34 1020 184 153 0 chr17 16766726 16766922 -68671558 + MER8 DNA MER2_type 14 239 0 1321 218 92 30 chr17 16766926 16767425 -68671055 + MER39 LTR ERV1 24 512 -195 377 112 2 0 chr17 16767426 16767491 -68670989 - Alu SINE Alu 0 301 244 2307 97 7 13 chr17 16767579 16767878 -68670602 + AluSx SINE Alu 1 297 -15 209 279 183 10 chr17 16769693 16769797 -68668683 + L2 LINE L2 3137 3258 -14 2506 60 3 0 chr17 16770032 16770330 -68668150 - AluY SINE Alu -12 299 1 376 216 31 74 chr17 16770417 16770472 -68668008 + L1M4 LINE L1 3437 3493 -2653 2394 86 0 26 chr17 16770472 16770785 -68667695 - AluSq SINE Alu -8 305 1 376 216 31 74 chr17 16770785 16770891 -68667589 + L1M4 LINE L1 3493 3591 -2555 1180 202 49 2 chr17 16771723 16772001 -68666479 - L1MC4 LINE L1 -674 7368 7049 2139 196 184 55 chr17 16772008 16772292 -68666188 + L1MC4 LINE L1 6705 6951 -1091 2144 110 50 3 chr17 16772292 16772591 -68665889 + AluSq SINE Alu 1 313 0 2139 196 184 55 chr17 16772591 16772758 -68665722 + L1MC4 LINE L1 6951 7095 -947 2237 103 0 0 chr17 16772758 16773089 -68665391 - AluSx SINE Alu 0 331 1 2139 196 184 55 chr17 16773089 16773119 -68665361 + L1MC4 LINE L1 7095 7120 -922 2095 157 10 55 chr17 16773119 16773534 -68664946 + MSTD LTR MaLR 1 396 0 2139 196 184 55 chr17 16773534 16773816 -68664664 + L1MC4 LINE L1 7120 7570 -472 399 203 0 0 chr17 16773816 16773885 -68664595 - AluJ/FRAM SINE Alu -2 300 232 2441 77 7 0 chr17 16773925 16774222 -68664258 - AluY SINE Alu -10 301 3 2432 68 0 17 chr17 16774224 16774520 -68663960 - AluY SINE Alu -20 291 1 2942 3 0 0 chr17 16774530 16774837 -68663643 - AluY SINE Alu -4 307 1 291 130 37 0 chr17 16774837 16774891 -68663589 + MADE1 DNA Mariner 24 79 -1 1417 160 55 0 chr17 16774891 16775110 -68663370 - AluJo SINE Alu -79 233 3 396 168 144 104 chr17 16775113 16775286 -68663194 + L1MC4 LINE L1 7561 7740 -302 2392 114 0 0 chr17 16775309 16775615 -68662865 + AluSx SINE Alu 1 306 -6 296 271 0 0 chr17 16775653 16775738 -68662742 + L1MC4 LINE L1 7925 8009 -33 204 343 125 21 chr17 16776393 16776720 -68661760 - L2 LINE L2 -337 2977 2617 2403 90 7 0 chr17 16776792 16777091 -68661389 + AluSp SINE Alu 1 301 -12 245 222 162 17 chr17 16777515 16777632 -68660848 + L2 LINE L2 2385 2518 -796 2348 100 7 13 chr17 16778210 16778519 -68659961 + AluSq SINE Alu 1 307 -6 2268 107 0 3 chr17 16779101 16779392 -68659088 + AluSx SINE Alu 12 301 -11 2144 119 3 28 chr17 16779402 16779721 -68658759 + AluSx SINE Alu 1 311 -1 591 268 101 42 chr17 16779721 16779776 -68658704 + HAL1 LINE L1 1236 1286 -1221 1140 211 13 4 chr17 16779776 16780013 -68658467 + MER8 DNA MER2_type 1 239 0 591 268 101 42 chr17 16780013 16780334 -68658146 + HAL1 LINE L1 1286 1634 -873 1094 153 0 0 chr17 16780335 16780492 -68657988 - AluJb SINE Alu -22 290 134 2486 81 0 0 chr17 16780831 16781126 -68657354 + AluSx SINE Alu 1 295 -17 410 315 136 5 chr17 16782600 16782784 -68655696 + MIR SINE MIR 10 217 -45 299 298 106 7 chr17 16784339 16784490 -68653990 - L2 LINE L2 -500 2814 2649 209 301 26 44 chr17 16784520 16784633 -68653847 - L2 LINE L2 -1348 1966 1856 409 220 65 68 chr17 16784720 16785120 -68653360 - MLT1D LTR MaLR -5 500 2 2162 88 70 0 chr17 16785235 16785520 -68652960 - AluSq SINE Alu -8 305 1 2114 149 0 0 chr17 16785581 16785877 -68652603 - AluSx SINE Alu -14 298 3 2474 85 0 0 chr17 16785889 16786184 -68652296 - AluSq SINE Alu -18 295 1 225 209 60 30 chr17 16787267 16787334 -68651146 + MER5A DNA MER1_type 74 142 -47 * 275 269 43 0 chr17 16787274 16787367 -68651113 - MER5A DNA MER1_type -69 120 24 282 318 100 21 chr17 16788284 16788518 -68649962 + MIR SINE MIR 1 250 -12 213 311 105 39 chr17 16790764 16791050 -68647430 + L2 LINE L2 2228 2532 -782 649 190 40 58 chr17 16791305 16791479 -68647001 + L1MB7 LINE L1 6006 6176 -8 1793 144 0 33 chr17 16791489 16791794 -68646686 + AluJo SINE Alu 13 307 -5 2173 153 59 2 chr17 16792585 16792990 -68645490 - MSTA LTR MaLR 0 428 1 209 104 0 62 chr17 16793262 16793310 -68645170 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1952 163 3 7 chr17 16793363 16793664 -68644816 - AluJo SINE Alu -12 300 1 395 296 126 0 chr17 16793699 16793834 -68644646 + MIR SINE MIR 21 172 -90 616 220 71 0 chr17 16794120 16794261 -68644219 - MLT1L LTR MaLR -144 471 321 2506 71 7 10 chr17 16795224 16795532 -68642948 - AluY SINE Alu -4 307 1 793 227 76 62 chr17 16795637 16795769 -68642711 + HAL1 LINE L1 1796 1925 -582 2037 131 0 7 chr17 16795769 16796075 -68642405 + AluSg SINE Alu 1 304 -6 793 227 76 62 chr17 16796075 16796312 -68642168 + HAL1 LINE L1 1925 2170 -337 372 273 40 60 chr17 16796312 16796462 -68642018 + MER20B DNA MER1_type 19 165 -618 2271 125 0 0 chr17 16796508 16796819 -68641661 + AluY SINE Alu 1 311 0 374 78 0 31 chr17 16796860 16796924 -68641556 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 448 238 82 0 chr17 16796924 16797046 -68641434 - FLAM_C SINE Alu 0 133 2 4313 215 45 63 chr17 16797106 16797237 -68641243 + L1M4 LINE L1 472 604 -6042 2346 113 7 0 chr17 16797237 16797547 -68640933 + AluSq SINE Alu 1 312 -1 4313 215 45 63 chr17 16797547 16798122 -68640358 + L1M4 LINE L1 604 1188 -5458 1760 180 6 13 chr17 16798122 16798433 -68640047 - AluJo SINE Alu 0 312 4 4313 215 45 63 chr17 16798433 16798490 -68639990 + L1M4 LINE L1 1188 1245 -5401 2090 136 7 7 chr17 16798490 16798800 -68639680 + AluSx SINE Alu 1 310 -2 4313 215 45 63 chr17 16798800 16798926 -68639554 + L1M4 LINE L1 1245 1372 -5274 1888 138 37 24 chr17 16798926 16799054 -68639426 + AluSx SINE Alu 1 126 -186 198 0 0 0 chr17 16799054 16799076 -68639404 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1888 138 37 24 chr17 16799076 16799243 -68639237 + AluSx SINE Alu 126 300 -12 4313 215 45 63 chr17 16799243 16800003 -68638477 + L1M4 LINE L1 1372 2231 -4415 1990 160 3 3 chr17 16800003 16800309 -68638171 + AluSx SINE Alu 1 306 -6 4313 215 45 63 chr17 16800309 16800458 -68638022 + L1M4 LINE L1 2231 2381 -4265 2255 120 10 0 chr17 16800586 16800887 -68637593 + AluSg SINE Alu 1 304 -6 4224 213 50 86 chr17 16800892 16801855 -68636625 + L1 LINE L1 3788 4784 -1377 2497 82 0 0 chr17 16801855 16802158 -68636322 + AluY SINE Alu 1 303 -8 4224 213 50 86 chr17 16802158 16802593 -68635887 + L1 LINE L1 4784 5233 -928 2415 92 7 0 chr17 16802593 16802897 -68635583 - AluSg SINE Alu -4 306 1 4224 213 50 86 chr17 16802897 16803079 -68635401 + L1 LINE L1 5233 5309 -852 2204 125 13 0 chr17 16803079 16803384 -68635096 + AluSq SINE Alu 1 309 -4 4224 213 50 86 chr17 16803384 16803457 -68635023 + L1 LINE L1 5309 5383 -778 233 250 21 73 chr17 16803482 16803578 -68634902 - MIR SINE MIR -73 135 45 980 136 0 0 chr17 16803943 16804075 -68634405 - FLAM_C SINE Alu -11 132 1 2053 152 3 0 chr17 16804514 16804823 -68633657 + AluJb SINE Alu 1 310 -2 24 0 0 0 chr17 16804873 16804897 -68633583 + AT_rich Low_complexity Low_complexity 1 24 0 2466 137 20 24 chr17 16805095 16805548 -68632932 - L1MB3 LINE L1 -43 6140 5690 1131 282 62 36 chr17 16805910 16806541 -68631939 + L2 LINE L2 260 906 -2408 336 247 253 58 chr17 16806684 16806992 -68631488 + L2 LINE L2 1635 2002 -1312 1397 51 80 0 chr17 16807002 16807178 -68631302 + AluY SINE Alu 1 190 -121 224 306 14 0 chr17 16807191 16807263 -68631217 + L2 LINE L2 2260 2332 -982 953 281 89 56 chr17 16807361 16807441 -68631039 + L2 LINE L2 2560 2636 -677 2446 84 0 16 chr17 16807441 16807612 -68630868 - AluSq SINE Alu -9 304 139 2298 101 0 3 chr17 16807612 16807908 -68630572 - AluSc SINE Alu -14 295 1 2446 84 0 16 chr17 16807908 16808045 -68630435 - AluSq SINE Alu -174 139 1 953 281 89 56 chr17 16808045 16808111 -68630369 + L2 LINE L2 2636 2698 -615 1607 173 7 18 chr17 16808111 16808383 -68630097 - AluJo SINE Alu -5 307 39 953 281 89 56 chr17 16808383 16808918 -68629562 + L2 LINE L2 2698 3281 -32 1910 115 0 11 chr17 16809130 16809391 -68629089 - AluSg1 SINE Alu -20 289 32 419 304 21 75 chr17 16809568 16809661 -68628819 + HAL1 LINE L1 2277 2373 -134 1486 178 81 34 chr17 16809661 16809774 -68628706 + AluJo SINE Alu 1 107 -205 2405 97 0 0 chr17 16809774 16810073 -68628407 + AluSx SINE Alu 1 299 -13 1486 178 81 34 chr17 16810073 16810257 -68628223 + AluJo SINE Alu 107 312 0 419 304 21 75 chr17 16810257 16810353 -68628127 + HAL1 LINE L1 2373 2453 -54 1997 90 0 34 chr17 16810353 16810619 -68627861 - AluY SINE Alu -18 293 37 419 304 21 75 chr17 16810619 16810668 -68627812 + HAL1 LINE L1 2453 2503 -4 2148 133 0 19 chr17 16810892 16811175 -68627305 + AluSq SINE Alu 1 279 -34 214 0 26 51 chr17 16811175 16811214 -68627266 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 2148 133 0 19 chr17 16811214 16811245 -68627235 + AluSq SINE Alu 279 309 -4 2463 70 0 7 chr17 16811399 16811697 -68626783 + AluY SINE Alu 1 296 -15 183 42 0 0 chr17 16811724 16811748 -68626732 + (GA)n Simple_repeat Simple_repeat 2 25 0 2127 96 0 63 chr17 16811753 16812086 -68626394 + AluSx SINE Alu 1 312 0 1629 258 80 52 chr17 16812088 16812488 -68625992 + L1MC4a LINE L1 5315 5743 -2065 600 242 15 0 chr17 16812488 16812620 -68625860 - MER94 DNA DNA 0 134 1 1629 258 80 52 chr17 16812620 16812908 -68625572 + L1MC4a LINE L1 5743 6022 -1786 674 251 77 51 chr17 16813108 16813468 -68625012 + MLT1J LTR MaLR 65 510 -1 2317 87 0 0 chr17 16814362 16814660 -68623820 - AluSc SINE Alu -11 298 1 1645 140 4 8 chr17 16814719 16814984 -68623496 - L1PB4 LINE L1 0 6156 5893 31 0 0 0 chr17 16815231 16815262 -68623218 + AT_rich Low_complexity Low_complexity 1 31 0 240 244 41 89 chr17 16815482 16815605 -68622875 - L2 LINE L2 -56 3216 3100 679 179 36 77 chr17 16816225 16816332 -68622148 + MER53 DNA DNA 27 126 -63 2085 101 10 0 chr17 16816332 16816630 -68621850 + AluSg SINE Alu 1 301 -9 679 179 36 77 chr17 16816630 16816690 -68621790 + MER53 DNA DNA 126 187 -2 817 220 134 24 chr17 16816794 16817085 -68621395 + MLT1A1 LTR MaLR 10 332 -33 1298 159 68 4 chr17 16817798 16818062 -68620418 - AluJo SINE Alu -31 281 1 605 282 0 0 chr17 16818137 16818268 -68620212 + MIR SINE MIR 13 143 -119 1667 203 81 47 chr17 16818326 16818770 -68619710 + LTR2B LTR ERV1 32 490 0 1267 201 49 43 chr17 16819142 16819555 -68618925 + MLT2B1 LTR ERVL 1 414 0 2368 177 28 26 chr17 16819631 16820135 -68618345 + MLT1D LTR MaLR 1 505 0 1434 194 7 27 chr17 16820596 16820890 -68617590 + AluJo SINE Alu 1 288 -24 203 321 0 0 chr17 16822364 16822420 -68616060 + (TG)n Simple_repeat Simple_repeat 1 56 0 1699 152 0 48 chr17 16822706 16822870 -68615610 - AluJo SINE Alu -13 299 155 2103 116 0 7 chr17 16822870 16823172 -68615308 - AluSx SINE Alu -12 300 1 1699 152 0 48 chr17 16823172 16823317 -68615163 - AluJo SINE Alu -157 155 5 395 275 96 42 chr17 16824029 16824196 -68614284 - MER5B DNA MER1_type -1 177 2 1369 95 77 45 chr17 16824364 16824504 -68613976 + MER30 DNA MER1_type 3 154 -76 2059 115 0 3 chr17 16824504 16824800 -68613680 + AluSx SINE Alu 1 295 -17 1369 95 77 45 chr17 16824800 16824880 -68613600 + MER30 DNA MER1_type 154 230 0 616 226 25 50 chr17 16825879 16826064 -68612416 - FRAM SINE Alu 0 178 1 853 163 36 60 chr17 16826856 16827022 -68611458 + AluJb SINE Alu 139 300 -12 5971 218 55 43 chr17 16828350 16829153 -68609327 + L1MC/D LINE L1 3491 4283 -1991 2061 121 0 0 chr17 16829153 16829443 -68609037 + AluSg SINE Alu 1 290 -20 5971 218 55 43 chr17 16829443 16829464 -68609016 + L1MC/D LINE L1 4283 4302 -1972 1730 133 4 7 chr17 16829464 16829735 -68608745 + AluSc SINE Alu 38 307 -2 5971 218 55 43 chr17 16829735 16830431 -68608049 + L1MC/D LINE L1 4302 4988 -1286 2071 64 60 0 chr17 16830431 16830713 -68607767 + AluY SINE Alu 1 299 -12 5971 218 55 43 chr17 16830713 16830825 -68607655 + L1MC/D LINE L1 4988 5097 -1177 809 153 0 0 chr17 16830825 16830943 -68607537 + FLAM_C SINE Alu 1 118 -15 5971 218 55 43 chr17 16830943 16831328 -68607152 + L1MC/D LINE L1 5097 5529 -745 341 307 48 12 chr17 16832024 16832190 -68606290 - L1ME3A LINE L1 -4 6166 5995 2088 132 32 64 chr17 16832522 16832604 -68605876 + L1MB3 LINE L1 5758 5841 -342 1772 102 58 4 chr17 16832604 16832878 -68605602 + AluSx SINE Alu 7 295 -17 2088 132 32 64 chr17 16832878 16833233 -68605247 + L1MB3 LINE L1 5841 6181 -2 294 292 343 11 chr17 16833395 16833573 -68604907 + MIR SINE MIR 15 251 -11 2252 93 7 0 chr17 16833611 16833912 -68604568 - AluSp SINE Alu -10 303 1 4696 107 7 34 chr17 16834309 16834346 -68604134 + L1PA16 LINE L1 5448 5484 -682 1616 180 16 22 chr17 16834346 16834657 -68603823 + AluJo SINE Alu 1 309 -3 4696 107 7 34 chr17 16834657 16834966 -68603514 + L1PA16 LINE L1 5484 5800 -366 2172 112 0 0 chr17 16834966 16835270 -68603210 + AluSc SINE Alu 1 304 -5 4696 107 7 34 chr17 16835270 16835661 -68602819 + L1PA16 LINE L1 5800 6166 0 2192 110 0 0 chr17 16835849 16836148 -68602332 - AluSx SINE Alu -13 299 1 1361 85 0 0 chr17 16836429 16836606 -68601874 + AluSg SINE Alu 1 177 -133 892 129 7 0 chr17 16836664 16836811 -68601669 + AluSg/q SINE Alu 165 312 -1 374 305 42 3 chr17 16837284 16837488 -68600992 - L1M3 LINE L1 -683 5497 5289 1711 175 0 0 chr17 16837511 16837808 -68600672 - AluJo SINE Alu -15 297 1 548 225 59 36 chr17 16837814 16838075 -68600405 - L1MEd LINE L1 -4863 1342 1162 378 301 121 35 chr17 16838193 16838475 -68600005 + MLT1L LTR MaLR 201 506 -109 636 233 82 61 chr17 16838522 16838900 -68599580 - L1MEd LINE L1 -5034 1171 786 315 310 66 88 chr17 16838973 16839247 -68599233 - L1MEd LINE L1 -5592 613 346 425 268 53 75 chr17 16839248 16839359 -68599121 + L2 LINE L2 2115 2227 -1087 806 184 95 16 chr17 16839359 16839549 -68598931 - MER3 DNA MER1_type 0 209 5 425 268 53 75 chr17 16839549 16839702 -68598778 + L2 LINE L2 2227 2373 -941 1723 170 28 81 chr17 16839784 16840214 -68598266 + MLT2D LTR ERVL 1 407 -7 363 314 116 6 chr17 16840328 16840500 -68597980 + L2 LINE L2 2394 2584 -730 853 231 61 5 chr17 16841043 16841255 -68597225 + MER58A DNA MER1_type 1 224 0 361 211 40 0 chr17 16841314 16841390 -68597090 + MER103 DNA DNA 28 106 -60 399 127 0 0 chr17 16841566 16841629 -68596851 + (GGAA)n Simple_repeat Simple_repeat 4 66 0 225 94 0 0 chr17 16842429 16842461 -68596019 + (A)n Simple_repeat Simple_repeat 1 32 0 1720 145 23 26 chr17 16842511 16842624 -68595856 + AluSx SINE Alu 1 113 -199 1945 122 3 3 chr17 16842624 16842910 -68595570 + AluSq SINE Alu 1 286 -27 1720 145 23 26 chr17 16842910 16842932 -68595548 + AluSx SINE Alu 113 134 -178 2057 105 0 38 chr17 16842932 16843246 -68595234 + AluSx SINE Alu 1 302 -10 1720 145 23 26 chr17 16843246 16843413 -68595067 + AluSx SINE Alu 134 303 -9 2126 88 3 3 chr17 16843779 16844090 -68594390 - AluSx SINE Alu 0 311 1 271 377 58 9 chr17 16844225 16844448 -68594032 - L1MEd LINE L1 -6014 382 149 405 0 0 0 chr17 16844575 16844620 -68593860 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 581 238 23 57 chr17 16844681 16844872 -68593608 - MER6 DNA MER2_type -1 864 -52 287 317 37 0 chr17 16844985 16845067 -68593413 + MIR3 SINE MIR 76 160 -48 2211 109 0 0 chr17 16845128 16845432 -68593048 - AluSx SINE Alu -8 304 1 6043 94 21 19 chr17 16845572 16846463 -68592017 + L1PA11 LINE L1 5278 6170 -4 731 177 82 0 chr17 16846463 16846610 -68591870 - MER3 DNA MER1_type -50 159 1 557 318 114 4 chr17 16846723 16846959 -68591521 + MIR SINE MIR 1 262 0 275 211 34 6 chr17 16847025 16847096 -68591384 - L1ME LINE L1 -421 5749 5679 2126 88 3 3 chr17 16847636 16847949 -68590531 - AluSx SINE Alu 0 313 1 262 381 58 9 chr17 16848084 16848307 -68590173 - L1MEc LINE L1 -6014 382 149 351 0 0 0 chr17 16848434 16848473 -68590007 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 584 303 112 18 chr17 16848536 16849014 -68589466 + L1MC/D LINE L1 5237 5763 -490 1987 119 0 14 chr17 16849014 16849322 -68589158 - AluSx SINE Alu 0 304 1 584 303 112 18 chr17 16849322 16849336 -68589144 + L1MC/D LINE L1 5763 5774 -479 21 0 0 0 chr17 16849339 16849360 -68589120 + AT_rich Low_complexity Low_complexity 1 21 0 193 335 6 89 chr17 16849473 16849652 -68588828 + L3 LINE CR1 646 809 -768 2199 104 3 16 chr17 16849766 16850083 -68588397 + AluSq SINE Alu 1 313 0 396 0 0 0 chr17 16850083 16850127 -68588353 + (TA)n Simple_repeat Simple_repeat 2 45 0 570 222 66 101 chr17 16850341 16850746 -68587734 + MLT1H1 LTR MaLR 1 595 0 2233 75 7 23 chr17 16850953 16851261 -68587219 - AluY SINE Alu -8 303 1 581 238 23 57 chr17 16852744 16852935 -68585545 - MER6 DNA MER2_type -1 864 -52 287 317 37 0 chr17 16853048 16853130 -68585350 + MIR3 SINE MIR 76 160 -48 2211 109 0 0 chr17 16853191 16853495 -68584985 - AluSx SINE Alu -8 304 1 6067 93 21 19 chr17 16853635 16854527 -68583953 + L1PA11 LINE L1 5278 6171 -3 731 177 82 0 chr17 16854527 16854674 -68583806 - MER3 DNA MER1_type -50 159 1 557 318 114 4 chr17 16854787 16855023 -68583457 + MIR SINE MIR 1 262 0 275 196 36 0 chr17 16855089 16855145 -68583335 - L1MC/D LINE L1 -2061 5747 5690 259 247 130 13 chr17 16855267 16855344 -68583136 - L1MB3 LINE L1 -268 5915 5830 884 209 0 0 chr17 16856334 16856497 -68581983 - FRAM SINE Alu -16 160 1 1437 204 50 23 chr17 16857173 16857516 -68580964 + L1MB3 LINE L1 5830 6181 -2 2185 110 0 0 chr17 16857526 16857835 -68580645 + AluY SINE Alu 1 309 -2 2386 63 0 0 chr17 16859090 16859391 -68579089 + AluY SINE Alu 1 301 -10 1645 175 7 13 chr17 16859455 16859758 -68578722 - AluJo SINE Alu -11 301 1 720 314 95 57 chr17 16859874 16860368 -68578112 + L1ME LINE L1 3694 4206 -1940 2392 213 163 86 chr17 16860912 16861874 -68576606 + HAL1 LINE L1 14 900 -1607 2374 114 41 3 chr17 16861874 16862243 -68576237 + L1MB2 LINE L1 5785 6167 -4 2392 213 163 86 chr17 16862243 16862543 -68575937 + HAL1 LINE L1 900 1175 -1332 237 132 0 0 chr17 16862543 16862581 -68575899 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 2392 213 163 86 chr17 16862581 16863115 -68575365 + HAL1 LINE L1 1175 1666 -841 2256 101 10 0 chr17 16863115 16863413 -68575067 + AluSx SINE Alu 1 301 -11 2392 213 163 86 chr17 16863413 16863757 -68574723 + HAL1 LINE L1 1666 2398 -109 314 300 100 16 chr17 16864060 16864250 -68574230 + L1ME LINE L1 5487 5692 -429 1488 217 0 14 chr17 16864304 16864590 -68573890 - AluJo SINE Alu -30 282 1 3459 144 10 3 chr17 16864705 16865492 -68572988 - L1P5 LINE L1 -388 5763 4970 4443 169 50 18 chr17 16865496 16866441 -68572039 + L1 LINE L1 3835 4809 -1337 1603 180 40 15 chr17 16866456 16866783 -68571697 - L1MB5 LINE L1 -38 6136 5802 2309 185 69 14 chr17 16866787 16867296 -68571184 - MER68 LTR ERV1 -25 537 1 1374 155 109 0 chr17 16868119 16868358 -68570122 - AluJb SINE Alu -47 265 1 375 62 250 0 chr17 16868419 16868483 -68569997 + MADE1 DNA Mariner 1 80 0 806 219 10 42 chr17 16868500 16868692 -68569788 - MER58A DNA MER1_type -9 215 30 923 179 0 0 chr17 16869373 16869539 -68568941 - AluSg/x SINE Alu 0 302 137 821 118 0 8 chr17 16869640 16869759 -68568721 - AluSq/x SINE Alu -195 118 1 32 81 0 0 chr17 16869762 16869836 -68568644 + AT_rich Low_complexity Low_complexity 1 74 0 26 0 0 0 chr17 16869907 16869933 -68568547 + AT_rich Low_complexity Low_complexity 1 26 0 2330 80 0 29 chr17 16869996 16870307 -68568173 - AluY SINE Alu -9 302 1 1573 347 56 8 chr17 16870314 16870416 -68568064 + L1ME3A LINE L1 5083 5179 -991 4829 22 0 0 chr17 16870416 16870926 -68567554 - SVA Other Other -7 1379 870 1573 347 56 8 chr17 16870926 16871580 -68566900 + L1ME3A LINE L1 5179 5884 -286 574 129 0 0 chr17 16871580 16871673 -68566807 + LTR9B LTR ERV1 468 560 -84 2211 112 0 7 chr17 16871954 16872259 -68566221 + AluSx SINE Alu 1 303 -9 3316 133 31 26 chr17 16872544 16873122 -68565358 + LTR35 LTR ERV1 38 618 0 209 327 97 18 chr17 16873122 16873235 -68565245 - MER91A DNA MER1_type -27 169 48 1665 170 61 4 chr17 16873868 16873980 -68564500 + AluJo SINE Alu 7 111 -201 234 0 0 0 chr17 16873980 16874006 -68564474 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1665 170 61 4 chr17 16874006 16874170 -68564310 + AluJo SINE Alu 111 299 -13 413 113 32 0 chr17 16874619 16874681 -68563799 + AluSg/x SINE Alu 166 229 -83 1993 137 26 16 chr17 16875004 16875311 -68563169 + AluSg SINE Alu 1 310 0 404 145 0 0 chr17 16876895 16876957 -68561523 - MER45A DNA AcHobo -52 126 65 1252 322 62 83 chr17 16877195 16877664 -68560816 - LTR2B LTR ERV1 0 490 32 729 158 0 47 chr17 16877763 16877890 -68560590 - FLAM_A SINE Alu -10 132 12 200 367 100 0 chr17 16877918 16878038 -68560442 - MIR3 SINE MIR -7 201 70 647 176 59 17 chr17 16878449 16878568 -68559912 + FLAM_C SINE Alu 1 124 -9 3258 141 17 33 chr17 16879177 16879753 -68558727 + L1MB1 LINE L1 5367 5933 -235 8922 125 50 8 chr17 16879774 16881127 -68557353 - THE1C-int LTR MaLR -170 1410 1 1467 126 53 148 chr17 16881129 16881541 -68556939 - THE1C LTR MaLR -2 373 1 1090 109 81 101 chr17 16881542 16881674 -68556806 + L1MB1 LINE L1 5926 6052 -116 1248 103 56 5 chr17 16881674 16881868 -68556612 + L1PA16 LINE L1 5953 6157 -9 1090 109 81 101 chr17 16881868 16881983 -68556497 + L1MB1 LINE L1 6052 6168 0 629 217 25 84 chr17 16882204 16882335 -68556145 + MIR SINE MIR 69 185 -77 2230 115 3 3 chr17 16882335 16882639 -68555841 + AluSx SINE Alu 1 304 -8 629 217 25 84 chr17 16882639 16882710 -68555770 + MIR SINE MIR 185 259 -3 1868 243 69 59 chr17 16882968 16883311 -68555169 - L1MCa LINE L1 -2030 4396 4058 2289 84 3 0 chr17 16883311 16883623 -68554857 + AluSp SINE Alu 1 313 0 1868 243 69 59 chr17 16883623 16884188 -68554292 - L1MCa LINE L1 -2368 4058 3478 655 299 82 49 chr17 16884190 16885096 -68553384 - L1MCa LINE L1 -4669 1938 988 248 261 136 45 chr17 16886212 16886388 -68552092 + LTR67 LTR ERVL 358 549 -8 340 276 0 75 chr17 16886583 16886717 -68551763 - L2 LINE L2 -1 3312 3189 231 61 0 0 chr17 16886789 16886822 -68551658 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 270 0 0 chr17 16886822 16886885 -68551595 + L1ME4a LINE L1 5955 6017 -104 2451 68 3 0 chr17 16887436 16887729 -68550751 - AluY SINE Alu -13 298 5 486 75 0 0 chr17 16890636 16890703 -68547777 + (TG)n Simple_repeat Simple_repeat 2 68 0 2087 135 13 13 chr17 16890772 16891084 -68547396 + AluSx SINE Alu 1 312 0 395 105 0 7 chr17 16891092 16891153 -68547327 + Alu SINE Alu 3 55 -245 1530 186 19 0 chr17 16891154 16891412 -68547068 - AluJb SINE Alu -49 263 1 2129 135 78 66 chr17 16891560 16891892 -68546588 + MSTA LTR MaLR 1 328 -100 2327 97 0 7 chr17 16891892 16892191 -68546289 - AluY SINE Alu -13 298 2 2129 135 78 66 chr17 16892191 16892238 -68546242 + MSTA LTR MaLR 328 373 -55 2135 141 0 0 chr17 16892238 16892537 -68545943 - AluSx SINE Alu -13 299 1 2129 135 78 66 chr17 16892537 16892579 -68545901 + MSTA LTR MaLR 373 428 0 183 281 288 13 chr17 16892593 16892746 -68545734 - MIR SINE MIR -30 232 38 21 0 0 0 chr17 16892832 16892853 -68545627 + AT_rich Low_complexity Low_complexity 1 21 0 864 173 0 0 chr17 16893291 16893424 -68545056 - AluSq/x SINE Alu -180 133 1 2116 123 10 10 chr17 16894667 16894975 -68543505 - AluSx SINE Alu -4 308 1 237 83 0 0 chr17 16895395 16895431 -68543049 + (TG)n Simple_repeat Simple_repeat 1 36 0 1550 200 24 0 chr17 16895630 16895925 -68542555 + AluJb SINE Alu 1 302 -10 446 295 113 43 chr17 16895962 16896224 -68542256 + L1ME4a LINE L1 5257 5499 -622 2647 52 0 3 chr17 16896224 16896534 -68541946 + AluY SINE Alu 1 309 -2 446 295 113 43 chr17 16896534 16896979 -68541501 + L1ME4a LINE L1 5499 6019 -102 2880 3 0 0 chr17 16897189 16897491 -68540989 + AluYa5 SINE Alu 1 302 -9 2259 111 7 0 chr17 16897730 16898037 -68540443 + AluY SINE Alu 1 309 -2 3494 91 20 14 chr17 16898800 16899308 -68539172 - MER9 LTR ERVK 0 511 1 184 316 13 13 chr17 16901248 16901327 -68537153 - MIR3 SINE MIR -12 196 118 204 40 0 0 chr17 16903370 16903395 -68535085 + (TTCTCC)n Simple_repeat Simple_repeat 6 30 0 281 336 0 40 chr17 16904411 16904560 -68533920 + MER5B DNA MER1_type 3 145 -33 230 318 56 9 chr17 16904732 16904839 -68533641 - MER5B DNA MER1_type -17 161 50 1327 246 58 78 chr17 16905897 16906294 -68532186 + MER82 DNA MER2_type 199 587 -66 2043 88 84 4 chr17 16906294 16906568 -68531912 + AluSp SINE Alu 1 296 -17 1327 246 58 78 chr17 16906568 16906634 -68531846 + MER82 DNA MER2_type 587 653 0 2296 120 3 0 chr17 16906718 16907019 -68531461 - AluSq SINE Alu -11 302 1 728 239 12 6 chr17 16907561 16907724 -68530756 + FRAM SINE Alu 1 164 -2 359 114 0 14 chr17 16908266 16908336 -68530144 + L1PA16 LINE L1 6080 6148 -18 363 145 12 48 chr17 16909333 16909416 -68529064 + L1 LINE L1 5174 5253 -893 1929 107 40 20 chr17 16909417 16909554 -68528926 + AluSq SINE Alu 1 134 -179 2300 110 0 0 chr17 16909554 16909853 -68528627 + AluSc SINE Alu 1 299 -10 1929 107 40 20 chr17 16909853 16910015 -68528465 + AluSq SINE Alu 134 306 -7 5632 226 38 52 chr17 16910024 16911165 -68527315 + L1MB7 LINE L1 2425 3580 -2566 2415 95 7 0 chr17 16911165 16911469 -68527011 + AluSp SINE Alu 1 306 -7 5632 226 38 52 chr17 16911469 16911838 -68526642 + L1MB7 LINE L1 3580 3908 -2238 2391 99 0 6 chr17 16911838 16912150 -68526330 + AluY SINE Alu 1 310 -1 5632 226 38 52 chr17 16912150 16912492 -68525988 + L1MB7 LINE L1 3908 4253 -1893 1306 207 48 40 chr17 16912490 16912843 -68525637 + L1MB7 LINE L1 4879 5234 -912 * 3946 178 65 48 chr17 16913153 16914074 -68524406 + L1MB7 LINE L1 5256 6174 -10 514 171 143 0 chr17 16914814 16914919 -68523561 + MER103 DNA DNA 1 120 -46 380 269 40 62 chr17 16915618 16915845 -68522635 + L2 LINE L2 2882 3103 -169 580 281 52 13 chr17 16915851 16916082 -68522398 + MIR SINE MIR 7 246 -16 23 33 0 0 chr17 16916473 16916503 -68521977 + AT_rich Low_complexity Low_complexity 1 30 0 2433 62 3 20 chr17 16916625 16916929 -68521551 + AluY SINE Alu 1 299 -12 330 279 77 48 chr17 16916932 16917140 -68521340 + L1M4 LINE L1 3723 3936 -2210 2508 71 3 6 chr17 16917191 16917502 -68520978 + AluSp SINE Alu 1 310 -3 2404 91 0 0 chr17 16917512 16917809 -68520671 + AluSq SINE Alu 1 297 -16 308 314 57 19 chr17 16917814 16918024 -68520456 + L1M4 LINE L1 3208 3425 -2721 1219 140 36 5 chr17 16918026 16918219 -68520261 + AluSx SINE Alu 1 199 -113 691 98 62 18 chr17 16918219 16918410 -68520070 + AluSx SINE Alu 67 307 -3 579 277 69 52 chr17 16918427 16918893 -68519587 + L1M4 LINE L1 3441 3914 -2232 2270 178 60 7 chr17 16920348 16920935 -68517545 - L1PB4 LINE L1 0 6161 5514 938 221 10 0 chr17 16920922 16921126 -68517354 - L1PB4 LINE L1 -1067 5079 4874 * 546 270 52 37 chr17 16921142 16921412 -68517068 - L1MCa LINE L1 -1983 4443 4170 22 0 0 0 chr17 16922821 16922843 -68515637 + AT_rich Low_complexity Low_complexity 1 22 0 1260 57 0 40 chr17 16923132 16923309 -68515171 - L1PB1 LINE L1 0 6151 5982 1745 230 82 37 chr17 16924157 16925015 -68513465 - L1MCa LINE L1 -3223 3203 2316 816 261 13 42 chr17 16925025 16925225 -68513255 - L1MA10 LINE L1 -14 6320 6116 273 75 0 0 chr17 16925225 16925265 -68513215 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2091 118 0 4 chr17 16925267 16925546 -68512934 - AluSc SINE Alu -31 278 1 816 261 13 42 chr17 16925546 16925649 -68512831 - L1MA10 LINE L1 -219 6115 6023 295 169 68 0 chr17 16925663 16925722 -68512758 - L1MA9 LINE L1 0 6312 6250 727 239 49 51 chr17 16925735 16926058 -68512422 - L1M4 LINE L1 -3849 2533 2209 2376 110 0 0 chr17 16926058 16926367 -68512113 - AluSg1 SINE Alu 0 309 1 727 239 49 51 chr17 16926367 16926476 -68512004 - L1M4 LINE L1 -4173 2209 2101 2290 109 0 0 chr17 16926482 16926775 -68511705 + AluSp SINE Alu 1 293 -20 345 47 0 0 chr17 16926776 16926809 -68511671 + (TG)n Simple_repeat Simple_repeat 1 76 0 345 47 0 0 chr17 16926809 16926852 -68511628 + (TG)n Simple_repeat Simple_repeat 2 44 0 272 244 51 0 chr17 16926970 16927048 -68511432 + MIR3 SINE MIR 83 164 -44 252 276 26 0 chr17 16927060 16927136 -68511344 + MER116 DNA Mariner 2 79 -1 1461 108 0 0 chr17 16927479 16927664 -68510816 - AluSq SINE Alu -128 185 1 2337 97 0 0 chr17 16929722 16930011 -68508469 + AluSc SINE Alu 1 289 -20 208 323 15 0 chr17 16930964 16931029 -68507451 + L2 LINE L2 3187 3252 -20 189 107 0 0 chr17 16931118 16931146 -68507334 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 2415 87 0 3 chr17 16931149 16931448 -68507032 + AluY SINE Alu 1 298 -13 2554 61 0 0 chr17 16931448 16931743 -68506737 + AluY SINE Alu 1 296 -15 2128 127 23 7 chr17 16932119 16932426 -68506054 + AluSx SINE Alu 1 312 0 681 114 0 0 chr17 16932438 16932543 -68505937 + (GGAA)n Simple_repeat Simple_repeat 4 108 0 189 121 0 0 chr17 16932546 16932579 -68505901 + (CAAAG)n Simple_repeat Simple_repeat 3 35 0 2504 48 7 0 chr17 16933200 16933495 -68504985 - AluY SINE Alu -14 297 1 2311 75 14 0 chr17 16933506 16933801 -68504679 - AluY SINE Alu -10 301 3 3316 38 15 0 chr17 16933852 16934250 -68504230 - L1PA7 LINE L1 0 6154 5751 377 312 110 41 chr17 16934361 16935023 -68503457 + L2 LINE L2 2317 3056 -257 332 277 18 0 chr17 16935331 16935443 -68503037 + L2 LINE L2 3154 3267 -5 203 176 59 39 chr17 16936442 16936493 -68501987 + MER5A DNA MER1_type 1 52 -137 2835 32 0 0 chr17 16937116 16937427 -68501053 - AluY SINE Alu 0 311 1 1068 135 0 0 chr17 16937427 16937574 -68500906 - AluSc SINE Alu -15 294 145 2481 77 0 0 chr17 16937586 16937897 -68500583 - AluY SINE Alu 0 311 1 2221 79 3 61 chr17 16937967 16938297 -68500183 + AluY SINE Alu 1 311 0 2452 93 0 0 chr17 16938319 16938629 -68499851 + AluSg SINE Alu 1 310 0 19961 47 6 2 chr17 16939052 16942297 -68496183 + L1PA5 LINE L1 2933 6154 0 2081 98 14 3 chr17 16942574 16942871 -68495609 + AluSc SINE Alu 1 300 -9 216 0 0 0 chr17 16943062 16943086 -68495394 + (TA)n Simple_repeat Simple_repeat 2 25 0 1470 171 3 51 chr17 16943358 16943651 -68494829 + AluJb SINE Alu 1 279 -33 796 170 55 83 chr17 16943745 16943963 -68494517 - L1MA8 LINE L1 -25 6266 6055 2629 47 0 0 chr17 16944179 16944480 -68494000 - AluY SINE Alu -10 301 1 676 268 84 41 chr17 16945042 16945481 -68492999 + L1ME3A LINE L1 2681 3100 -3046 2663 43 0 3 chr17 16945481 16945786 -68492694 + AluY SINE Alu 1 304 -7 676 268 84 41 chr17 16945786 16945936 -68492544 + L1ME3A LINE L1 3100 5093 -1053 198 0 0 0 chr17 16945936 16945958 -68492522 + (T)n Simple_repeat Simple_repeat 1 22 0 284 91 0 0 chr17 16948826 16948870 -68489610 - Alu SINE Alu 0 300 257 21 0 0 0 chr17 16949317 16949338 -68489142 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr17 16951201 16951245 -68487235 + GC_rich Low_complexity Low_complexity 1 44 0 42 57 0 0 chr17 16951300 16951370 -68487110 + GC_rich Low_complexity Low_complexity 1 70 0 495 0 0 0 chr17 16951447 16951502 -68486978 + (TG)n Simple_repeat Simple_repeat 2 56 0 2363 79 0 10 chr17 16951763 16952067 -68486413 + AluY SINE Alu 1 301 -10 201 368 0 13 chr17 16954350 16954426 -68484054 - MIR SINE MIR -168 94 20 29 0 0 0 chr17 16954747 16954776 -68483704 + AT_rich Low_complexity Low_complexity 1 29 0 2103 92 11 7 chr17 16954778 16955059 -68483421 - AluSq SINE Alu -17 296 15 504 108 135 0 chr17 16955200 16955274 -68483206 - 5S rRNA rRNA -36 85 2 1416 237 98 24 chr17 16955277 16955779 -68482701 + L1ME3A LINE L1 5254 5792 -378 359 179 39 62 chr17 16955850 16956016 -68482464 + L1ME3A LINE L1 5773 5948 -214 2239 51 0 51 chr17 16956072 16956387 -68482093 + AluY SINE Alu 1 299 -12 422 299 73 20 chr17 16956428 16956632 -68481848 + L1ME3A LINE L1 5930 6144 -26 622 172 0 13 chr17 16956755 16956868 -68481612 + Tigger3(Golem) DNA MER2_type 11 109 -2920 2568 105 37 19 chr17 16956873 16957301 -68481179 + Tigger3(Golem) DNA MER2_type 2300 2735 -294 2005 144 42 33 chr17 16957301 16957662 -68480818 + THE1B LTR MaLR 1 364 0 10685 110 22 20 chr17 16957662 16958928 -68479552 + THE1B-int LTR MaLR 1 1273 -307 2474 73 0 7 chr17 16958928 16959229 -68479251 + AluY SINE Alu 13 311 0 10685 110 22 20 chr17 16959229 16959532 -68478948 + THE1B-int LTR MaLR 1273 1574 -6 2068 150 33 30 chr17 16959537 16959898 -68478582 + THE1B LTR MaLR 1 362 -2 1708 123 26 62 chr17 16959900 16960208 -68478272 + Tigger3(Golem) DNA MER2_type 2731 3027 -2 234 296 40 16 chr17 16960495 16960621 -68477859 + L1MC/D LINE L1 5692 5819 -302 27 22 0 22 chr17 16960849 16960861 -68477619 + AT_rich Low_complexity Low_complexity 1 12 -32 1575 189 0 26 chr17 16960861 16961163 -68477317 + AluSx SINE Alu 1 294 -18 27 22 0 22 chr17 16961163 16961195 -68477285 + AT_rich Low_complexity Low_complexity 12 44 0 1836 232 80 90 chr17 16961203 16961685 -68476795 + L1ME LINE L1 33 518 -5552 2296 158 44 7 chr17 16961685 16962096 -68476384 - MSTB LTR MaLR 0 426 1 1836 232 80 90 chr17 16962096 16962681 -68475799 + L1ME LINE L1 518 1089 -4981 753 222 71 45 chr17 16963097 16963427 -68475053 + L1ME LINE L1 794 1429 -4572 1208 288 59 31 chr17 16963549 16964095 -68474385 - L1ME3A LINE L1 -10 6160 5600 758 125 23 120 chr17 16964115 16964191 -68474289 + L1MA8 LINE L1 6028 6110 -181 2462 70 3 0 chr17 16964191 16964489 -68473991 + AluY SINE Alu 1 299 -12 758 125 23 120 chr17 16964489 16964567 -68473913 + L1MA8 LINE L1 6110 6158 -133 2080 113 41 3 chr17 16964567 16964860 -68473620 + AluSg SINE Alu 1 304 -6 758 125 23 120 chr17 16964860 16964920 -68473560 + L1MA8 LINE L1 6158 6222 -69 426 303 72 43 chr17 16965040 16965248 -68473232 - L1ME3A LINE L1 -589 5573 5360 1889 111 0 28 chr17 16965259 16965548 -68472932 + AluSq SINE Alu 5 285 -28 396 55 0 0 chr17 16965548 16965603 -68472877 + (CCAA)n Simple_repeat Simple_repeat 1 55 0 651 120 74 0 chr17 16965618 16965726 -68472754 + AluSp/q SINE Alu 174 289 -24 180 0 0 0 chr17 16965732 16965752 -68472728 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1165 100 12 19 chr17 16965794 16965954 -68472526 - AluSc SINE Alu -19 290 132 2314 91 0 10 chr17 16965954 16966262 -68472218 - AluY SINE Alu -6 305 1 233 362 16 0 chr17 16969843 16969970 -68468510 + (TG)n Simple_repeat Simple_repeat 1 129 0 1477 206 54 12 chr17 16971215 16971550 -68466930 + MLT1A1 LTR MaLR 13 361 -4 897 260 34 24 chr17 16971559 16971855 -68466625 + MER89-int LTR ERV1 1361 1659 -5142 1537 212 0 22 chr17 16973784 16974100 -68464380 + AluJo SINE Alu 3 311 -1 1910 156 52 27 chr17 16974427 16974793 -68463687 - THE1C LTR MaLR 0 375 1 3999 133 20 15 chr17 16974793 16975453 -68463027 - THE1C-int LTR MaLR 0 1580 918 359 226 97 86 chr17 16975941 16976127 -68462353 + L1 LINE L1 2975 3162 -2984 462 222 68 12 chr17 16976232 16976394 -68462086 + L1ME4a LINE L1 5950 6120 -1 207 68 23 45 chr17 16976455 16976499 -68461981 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1389 48 0 4 chr17 16976584 16976794 -68461686 + AluY SINE Alu 1 300 -11 22 42 0 0 chr17 16977289 16977313 -68461167 + AT_rich Low_complexity Low_complexity 1 24 0 589 282 96 29 chr17 16977396 16977811 -68460669 + L1ME4a LINE L1 5457 5899 -222 1584 130 4 4 chr17 16977842 16978072 -68460408 - AluSq SINE Alu -16 297 68 330 276 74 84 chr17 16978102 16978305 -68460175 + L1ME3 LINE L1 5535 5735 -386 2306 99 3 6 chr17 16978915 16979229 -68459251 - AluSq SINE Alu 0 313 1 825 49 65 8 chr17 16979233 16979356 -68459124 - AluSc SINE Alu -3 306 177 1397 139 35 82 chr17 16979434 16979750 -68458730 - AluJo SINE Alu -7 305 5 463 223 280 0 chr17 16979784 16979959 -68458521 - L1ME3 LINE L1 -14 6148 5925 853 168 17 89 chr17 16979976 16980155 -68458325 + FRAM SINE Alu 1 166 0 338 209 22 137 chr17 16980171 16980237 -68458243 + L1ME3 LINE L1 5975 6018 -144 2001 121 46 4 chr17 16980237 16980518 -68457962 + AluSg SINE Alu 1 293 -17 338 209 22 137 chr17 16980518 16980590 -68457890 + L1ME3 LINE L1 6018 6097 -65 2385 97 10 0 chr17 16980636 16980945 -68457535 + AluSp SINE Alu 1 312 -1 2087 79 79 0 chr17 16981073 16981352 -68457128 + AluSq SINE Alu 1 301 -12 2193 120 0 10 chr17 16981354 16981662 -68456818 + AluSx SINE Alu 1 305 -7 820 229 29 12 chr17 16981891 16982131 -68456349 + L1M4 LINE L1 4615 4858 -1288 2290 92 3 0 chr17 16982131 16982443 -68456037 - AluSp SINE Alu 0 314 2 2087 139 10 0 chr17 16982453 16982762 -68455718 - AluSx SINE Alu 0 312 1 2431 89 7 0 chr17 16982816 16983119 -68455361 - AluSq SINE Alu -8 305 1 209 206 191 15 chr17 16983519 16983587 -68454893 + L2 LINE L2 3229 3308 -5 1955 140 0 14 chr17 16983670 16983988 -68454492 - AluSx SINE Alu 0 314 1 2267 109 7 0 chr17 16984029 16984323 -68454157 - AluSq SINE Alu -17 296 1 1308 181 47 43 chr17 16984440 16984717 -68453763 - AluJo SINE Alu -21 291 14 1756 147 73 0 chr17 16984717 16984989 -68453491 - AluSx SINE Alu -14 298 7 2206 119 0 0 chr17 16985003 16985323 -68453157 - AluSg SINE Alu 0 320 1 913 136 0 0 chr17 16985702 16985827 -68452653 - FRAM SINE Alu -14 162 38 1209 126 0 0 chr17 16985985 16986152 -68452328 + AluSq SINE Alu 132 298 -15 1090 121 73 47 chr17 16986165 16986238 -68452242 + L1MB4 LINE L1 5943 6013 -167 2261 99 3 0 chr17 16986238 16986546 -68451934 - AluSp SINE Alu 0 309 1 1090 121 73 47 chr17 16986546 16986703 -68451777 + L1MB4 LINE L1 6013 6180 0 1021 154 41 18 chr17 16986842 16986919 -68451561 + L1MB3 LINE L1 5930 6004 -179 2069 136 0 7 chr17 16986919 16987228 -68451252 - AluSx SINE Alu -5 307 1 1021 154 41 18 chr17 16987228 16987370 -68451110 + L1MB3 LINE L1 6004 6154 -29 2163 132 0 10 chr17 16987381 16987692 -68450788 - AluSx SINE Alu 0 312 5 1714 174 28 0 chr17 16987739 16988021 -68450459 - AluJb SINE Alu -22 290 1 2272 96 7 0 chr17 16988024 16988316 -68450164 - AluSp SINE Alu -19 294 1 202 256 209 0 chr17 16989065 16989151 -68449329 - MER91A DNA MER1_type 0 196 93 2865 124 28 6 chr17 16989165 16989631 -68448849 - MER31A LTR ERV1 -9 476 1 617 237 83 18 chr17 16989694 16989863 -68448617 - MIR SINE MIR -19 243 64 1151 123 0 0 chr17 16990215 16990369 -68448111 - AluSg/x SINE Alu -24 286 133 298 0 0 45 chr17 16990371 16990415 -68448065 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1978 120 0 31 chr17 16990415 16990706 -68447774 - AluSx SINE Alu -30 282 1 379 270 128 11 chr17 16990706 16990971 -68447509 - L1ME3 LINE L1 -222 5948 5646 1791 171 0 31 chr17 16990992 16991314 -68447166 + AluJb SINE Alu 1 312 0 2099 104 61 0 chr17 16991594 16991873 -68446607 + AluSg SINE Alu 1 296 -14 1507 203 11 7 chr17 16991905 16992186 -68446294 - AluJo SINE Alu -30 282 1 512 241 129 0 chr17 16992278 16992448 -68446032 - L1ME3 LINE L1 -504 5660 5469 675 222 24 8 chr17 16992453 16992579 -68445901 - FLAM_C SINE Alu -4 129 2 2103 120 10 0 chr17 16992647 16992946 -68445534 - AluSx SINE Alu -10 302 1 386 165 0 25 chr17 16992949 16993028 -68445452 - L1ME3 LINE L1 -1448 4698 4622 1541 213 10 19 chr17 16993039 16993349 -68445131 + AluJo SINE Alu 1 307 -5 2191 117 7 0 chr17 16993352 16993651 -68444829 + AluSp SINE Alu 1 301 -12 870 97 0 0 chr17 16993661 16993774 -68444706 + AluSx SINE Alu 1 113 -200 1608 70 35 9 chr17 16993774 16994004 -68444476 + MLT2A1 LTR ERVL 1 236 -208 1369 138 10 0 chr17 16994004 16994207 -68444273 - AluSg/x SINE Alu -14 298 94 1274 111 16 3 chr17 16994324 16994519 -68443961 + MLT2A1 LTR ERVL 216 475 -40 322 96 0 19 chr17 16994555 16994607 -68443873 + MLT2A2 LTR ERVL 403 453 0 1392 103 16 0 chr17 16994607 16994791 -68443689 + AluSx SINE Alu 109 295 -17 30 27 0 0 chr17 16994814 16994851 -68443629 + AT_rich Low_complexity Low_complexity 1 37 0 1196 238 28 35 chr17 16994958 16995130 -68443350 - L1ME1 LINE L1 -5 6161 5990 313 294 43 47 chr17 16995130 16995362 -68443118 - L1MA5 LINE L1 -296 6004 5773 2447 95 0 0 chr17 16995362 16995668 -68442812 - AluSc SINE Alu 0 309 4 192 40 0 0 chr17 16995670 16995695 -68442785 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2142 134 0 0 chr17 16995695 16995978 -68442502 - AluSx SINE Alu -29 283 1 313 294 43 47 chr17 16995978 16995996 -68442484 - L1MA5 LINE L1 -526 5774 5751 29 28 0 0 chr17 16996194 16996230 -68442250 + AT_rich Low_complexity Low_complexity 1 36 0 2446 96 0 3 chr17 16996277 16996590 -68441890 + AluSx SINE Alu 1 312 0 197 349 93 8 chr17 16996697 16996826 -68441654 + L2 LINE L2 2594 2733 -581 720 280 85 78 chr17 16996884 16996909 -68441571 - L2 LINE L2 -1 3312 3289 1790 159 32 38 chr17 16996909 16997223 -68441257 + AluJb SINE Alu 1 312 0 720 280 85 78 chr17 16997223 16997401 -68441079 - L2 LINE L2 -24 3289 3114 2363 65 0 26 chr17 16997401 16997707 -68440773 - AluY SINE Alu -13 298 1 1533 164 13 80 chr17 16997709 16998021 -68440459 - AluSg SINE Alu -19 291 1 720 280 85 78 chr17 16998021 16998273 -68440207 - L2 LINE L2 -199 3114 2850 316 222 192 0 chr17 16998566 16998665 -68439815 - MIR SINE MIR -4 258 141 2129 117 0 7 chr17 16998678 16998986 -68439494 + AluSx SINE Alu 12 317 0 250 217 50 0 chr17 16998992 16999052 -68439428 - MIR SINE MIR -59 203 141 191 281 169 11 chr17 16999091 16999180 -68439300 + L2 LINE L2 3170 3272 0 364 304 0 20 chr17 16999385 16999487 -68438993 + L1MC4 LINE L1 6604 6703 -1339 1955 126 4 4 chr17 16999548 16999819 -68438661 - AluSx SINE Alu -38 274 4 1524 155 4 9 chr17 16999848 17000080 -68438400 - AluJb SINE Alu -81 231 1 183 302 0 0 chr17 17000283 17000326 -68438154 - MIR3 SINE MIR -47 161 119 1386 133 15 41 chr17 17000327 17000345 -68438135 + L1MB2 LINE L1 5812 5829 -342 2125 117 3 38 chr17 17000345 17000661 -68437819 + AluSg SINE Alu 1 305 -5 1386 133 15 41 chr17 17000661 17000724 -68437756 + L1MB2 LINE L1 5829 5892 -279 1882 163 3 13 chr17 17000724 17001031 -68437449 + AluJb SINE Alu 3 306 -6 1386 133 15 41 chr17 17001031 17001219 -68437261 + L1MB2 LINE L1 5892 6075 -96 2373 56 0 11 chr17 17001220 17001535 -68436945 + AluY SINE Alu 1 312 0 2202 94 9 41 chr17 17001536 17001855 -68436625 - AluSq SINE Alu -4 309 1 825 194 50 22 chr17 17001950 17002130 -68436350 + AluJo SINE Alu 127 311 -1 2134 133 0 0 chr17 17002154 17002448 -68436032 - AluSx SINE Alu -10 302 9 241 216 118 0 chr17 17002939 17002990 -68435490 - L2 LINE L2 -1 3271 3215 1464 164 52 14 chr17 17004136 17004269 -68434211 + AluJo SINE Alu 2 128 -184 2238 111 3 3 chr17 17004269 17004575 -68433905 + AluSx SINE Alu 1 306 -6 1464 164 52 14 chr17 17004575 17004727 -68433753 + AluJo SINE Alu 128 298 -14 2272 93 3 7 chr17 17004752 17005053 -68433427 - AluSg1 SINE Alu -9 300 1 835 50 0 10 chr17 17005160 17005260 -68433220 + AluSq/x SINE Alu 35 133 -180 1881 94 4 0 chr17 17007507 17007752 -68430728 + AluSc SINE Alu 39 284 -25 434 198 81 0 chr17 17007767 17007853 -68430627 - FRAM SINE Alu -25 151 59 1903 116 54 0 chr17 17008255 17008531 -68429949 - AluSx SINE Alu -21 291 1 824 187 166 6 chr17 17009092 17009483 -68428997 + MER21B LTR ERV1 20 492 -371 576 164 90 8 chr17 17009484 17009606 -68428874 + AluJb SINE Alu 2 133 -179 1208 179 56 96 chr17 17009615 17009917 -68428563 + AluSx SINE Alu 5 294 -8 22 0 0 0 chr17 17010030 17010052 -68428428 + AT_rich Low_complexity Low_complexity 1 22 0 847 166 90 0 chr17 17010052 17010197 -68428283 - FRAM SINE Alu -23 153 1 2319 84 7 3 chr17 17010217 17010526 -68427954 - AluSx SINE Alu -2 310 1 2308 91 0 3 chr17 17010526 17010823 -68427657 - AluY SINE Alu -14 297 2 802 158 8 8 chr17 17010863 17010996 -68427484 + AluJo SINE Alu 3 135 -177 435 59 0 0 chr17 17010996 17011047 -68427433 + AluSp/q SINE Alu 200 250 -63 1243 148 0 48 chr17 17011047 17011277 -68427203 + AluJo SINE Alu 85 303 -9 313 145 0 66 chr17 17011559 17011635 -68426845 + AluJ/FRAM SINE Alu 231 301 -1 2195 28 0 0 chr17 17011654 17011903 -68426577 + AluY SINE Alu 1 249 -62 210 37 0 0 chr17 17012003 17012030 -68426450 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2491 84 0 7 chr17 17012041 17012351 -68426129 + AluSq SINE Alu 1 308 -5 291 183 0 0 chr17 17012564 17012624 -68425856 - L1ME4a LINE L1 -2 6119 6060 381 284 124 20 chr17 17012908 17012957 -68425523 - L1MB8 LINE L1 -237 5941 5893 823 239 57 17 chr17 17012957 17013254 -68425226 - L1MC4a LINE L1 -1946 5862 5554 285 44 44 0 chr17 17013249 17013294 -68425186 + L1M3 LINE L1 5783 5829 -351 * 2301 74 14 14 chr17 17013337 17013633 -68424847 + AluSc SINE Alu 3 298 -11 2265 113 0 7 chr17 17013635 17013935 -68424545 + AluSx SINE Alu 2 299 -13 1135 82 6 31 chr17 17013935 17014094 -68424386 + AluSq SINE Alu 83 237 -76 929 196 12 6 chr17 17214106 17215631 -68222849 + ALR/Alpha Satellite centromeric 1 1534 -26 1131 156 6 0 chr17 17215733 17222385 -68216095 - ALR/Alpha Satellite centromeric 0 6692 1 1131 160 8 1 chr17 17222485 17238271 -68200209 - ALR/Alpha Satellite centromeric 0 15893 1 948 173 4 2 chr17 17238373 17241108 -68197372 - ALR/Alpha Satellite centromeric 0 2742 1 6824 64 11 41 chr17 17241128 17242838 -68195642 - SVA Other Other -683 1386 1 982 166 8 2 chr17 17242840 17244567 -68193913 - ALR/Alpha Satellite centromeric 0 1738 1 1019 168 5 2 chr17 17244669 17252685 -68185795 - ALR/Alpha Satellite centromeric 0 8045 1 917 173 2 3 chr17 17252696 17253529 -68184951 - ALR/Alpha Satellite centromeric -2 832 1 14864 46 7 1 chr17 17253529 17256159 -68182321 + L1PA4 LINE L1 3511 6146 -9 230 243 35 14 chr17 17256159 17256303 -68182177 + (TTATA)n Simple_repeat Simple_repeat 4 150 0 1077 161 3 1 chr17 17257146 17260464 -68178016 - ALR/Alpha Satellite centromeric 0 3324 1 826 196 2 16 chr17 17260568 17261591 -68176889 - ALR/Alpha Satellite centromeric -1 1008 1 10730 34 0 0 chr17 17261591 17262959 -68175521 - L1P LINE L1 -1875 4271 2904 364 220 164 13 chr17 17263673 17263832 -68174648 + L1MC4 LINE L1 7444 7626 -416 1101 159 9 4 chr17 17263832 17264221 -68174259 - ALR/Alpha Satellite centromeric -6 390 1 936 283 158 18 chr17 17264345 17264953 -68173527 - L2 LINE L2 -2027 1287 595 2038 184 32 117 chr17 17265016 17265614 -68172866 - MER7C DNA MER2_type -55 547 1 332 268 143 62 chr17 17265624 17265896 -68172584 - L2 LINE L2 -2802 512 219 547 117 0 0 chr17 17266317 17266394 -68172086 - AluSc SINE Alu -12 297 221 353 293 16 16 chr17 17266878 17267001 -68171479 - L2 LINE L2 -55 3258 3136 701 216 8 0 chr17 17267004 17267129 -68171351 + FLAM_C SINE Alu 5 130 -13 289 249 147 102 chr17 17267313 17267490 -68170990 + MER5A DNA MER1_type 3 187 -2 386 258 23 23 chr17 17267566 17267698 -68170782 + L2 LINE L2 2927 3058 -214 311 305 12 10 chr17 17268034 17268154 -68170326 + MIR SINE MIR 33 152 -65 25 31 0 0 chr17 17269249 17269281 -68169199 + AT_rich Low_complexity Low_complexity 1 32 0 310 229 184 87 chr17 17269614 17269832 -68168648 - MLT1L LTR MaLR -225 390 152 404 323 39 8 chr17 17270019 17270149 -68168331 - L2 LINE L2 -2 3270 3137 397 306 6 12 chr17 17270286 17270446 -68168034 - L1ME LINE L1 -324 5797 5639 493 303 0 0 chr17 17270454 17270576 -68167904 + FLAM_A SINE Alu 2 123 -10 279 244 0 0 chr17 17270628 17270743 -68167737 + (CAT)n Simple_repeat Simple_repeat 1 115 0 687 106 5 80 chr17 17270765 17270953 -68167527 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 570 229 0 0 chr17 17270963 17271142 -68167338 + (CAT)n Simple_repeat Simple_repeat 1 179 0 229 296 145 69 chr17 17271814 17272118 -68166362 + L2 LINE L2 2578 2904 -410 311 281 31 0 chr17 17273458 17273554 -68164926 - MIR SINE MIR -66 142 44 345 186 0 0 chr17 17273567 17273626 -68164854 + MIR SINE MIR 61 119 -89 375 241 146 63 chr17 17273746 17273904 -68164576 - MIR SINE MIR -63 145 12 444 219 0 0 chr17 17274328 17274451 -68164029 + (TGGA)n Simple_repeat Simple_repeat 3 125 0 574 245 94 43 chr17 17275322 17275555 -68162925 - MIR SINE MIR -1 261 17 567 226 39 32 chr17 17275558 17275713 -68162767 + MIR SINE MIR 8 163 -99 2100 101 3 14 chr17 17276342 17276669 -68161811 - AluY SINE Alu 0 311 1 231 201 394 50 chr17 17280505 17280784 -68157696 + L2 LINE L2 2361 2735 -579 1931 198 24 46 chr17 17281073 17281569 -68156911 - L1MA8 LINE L1 -25 6968 6484 317 234 80 7 chr17 17281736 17281873 -68156607 - L1MA8 LINE L1 -816 6032 5886 878 226 141 7 chr17 17281879 17282176 -68156304 - L1MA8 LINE L1 -1082 5766 5430 416 262 48 8 chr17 17282189 17282315 -68156165 - L1MA8 LINE L1 -4311 2538 2408 400 263 177 27 chr17 17282321 17282559 -68155921 - L1M3 LINE L1 -391 5771 5509 914 266 38 42 chr17 17282587 17283011 -68155469 - L1ME1 LINE L1 -4 6162 5741 * 1170 253 72 75 chr17 17283007 17283891 -68154589 - L1M3 LINE L1 -815 5331 4450 293 287 0 32 chr17 17283901 17283995 -68154485 - L1M3 LINE L1 -1796 4350 4260 640 345 36 33 chr17 17284054 17284510 -68153970 + L1MA8 LINE L1 1 1658 -5838 1910 281 35 27 chr17 17284595 17285616 -68152864 + L1MA8 LINE L1 2213 3255 -4311 1611 247 57 14 chr17 17285629 17286213 -68152267 + L1MA8 LINE L1 6147 6755 -810 1925 197 8 50 chr17 17286369 17286871 -68151609 + L1MA8 LINE L1 7195 7675 -35 296 191 407 33 chr17 17287169 17287442 -68151038 - L2 LINE L2 -579 2735 2361 250 287 93 28 chr17 17287803 17287911 -68150569 + MIR SINE MIR 31 145 -63 382 315 35 35 chr17 17290079 17290368 -68148112 - SST1 Satellite centromeric -961 602 314 665 304 102 33 chr17 17291048 17291684 -68146796 - SST1 Satellite centromeric -847 716 37 1021 189 10 16 chr17 17291711 17292899 -68145581 + ALR/Alpha Satellite centromeric 1 1194 -1241 2179 105 3 13 chr17 17292899 17293212 -68145268 + AluSp SINE Alu 2 311 -2 1021 189 10 16 chr17 17293212 17294142 -68144338 + ALR/Alpha Satellite centromeric 1194 2417 -18 964 198 12 4 chr17 17294250 17295557 -68142923 + ALR/Alpha Satellite centromeric 1 1318 -83 1022 198 7 7 chr17 17295664 17301061 -68137419 + ALR/Alpha Satellite centromeric 1 5398 -1 740 222 12 33 chr17 17301164 17301663 -68136817 + ALR/Alpha Satellite centromeric 1 488 -10 976 194 8 9 chr17 17301678 17301732 -68136748 + ALR/Alpha Satellite centromeric 1 54 -4038 2314 100 0 0 chr17 17301732 17302032 -68136448 + AluY SINE Alu 2 301 -10 976 194 8 9 chr17 17302032 17305741 -68132739 + ALR/Alpha Satellite centromeric 54 4058 -34 1002 200 8 6 chr17 17305854 17309108 -68129372 + ALR/Alpha Satellite centromeric 1 3261 0 976 198 0 0 chr17 17309122 17309422 -68129058 + ALR/Alpha Satellite centromeric 1 300 -31 294 98 0 0 chr17 17310053 17310104 -68128376 + (CA)n Simple_repeat Simple_repeat 2 52 0 571 291 110 71 chr17 17310152 17311504 -68126976 - SST1 Satellite centromeric -27 1536 132 257 293 64 13 chr17 17312661 17312818 -68125662 - SST1 Satellite centromeric -9 1554 1390 432 304 99 38 chr17 17313008 17313594 -68124886 - SST1 Satellite centromeric -810 753 132 917 198 3 8 chr17 17313704 17315142 -68123338 + ALR/Alpha Satellite centromeric 1 1430 -48 874 202 9 12 chr17 17315280 17320413 -68118067 + ALR/Alpha Satellite centromeric 1 5418 -515 2403 92 0 3 chr17 17320413 17320717 -68117763 + AluY SINE Alu 1 303 -8 874 202 9 12 chr17 17320717 17321182 -68117298 + ALR/Alpha Satellite centromeric 5418 5883 -50 24 0 0 0 chr17 17373731 17373755 -68064725 + AT_rich Low_complexity Low_complexity 1 24 0 222 62 0 0 chr17 17374726 17374758 -68063722 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 831 192 0 7 chr17 17374911 17375057 -68063423 + FRAM SINE Alu 2 146 -30 223 216 119 172 chr17 17375067 17375201 -68063279 + MER5B DNA MER1_type 50 176 -2 319 274 65 32 chr17 17375348 17375472 -68063008 + L1MB1 LINE L1 4966 5093 -1053 22 94 0 0 chr17 17375490 17375554 -68062926 + AT_rich Low_complexity Low_complexity 1 64 0 4026 180 54 18 chr17 17375570 17376231 -68062249 + L1MB1 LINE L1 5266 5967 -201 2399 63 7 3 chr17 17376231 17376532 -68061948 + AluY SINE Alu 1 302 -9 4026 180 54 18 chr17 17376532 17376742 -68061738 + L1MB1 LINE L1 5967 6168 0 511 292 29 0 chr17 17376739 17377033 -68061447 + L1ME3 LINE L1 5191 5493 -669 * 763 134 0 17 chr17 17377034 17377153 -68061327 + FRAM SINE Alu 41 157 -19 1430 271 45 37 chr17 17377171 17377817 -68060663 + L1ME3 LINE L1 5495 6145 -17 387 234 201 33 chr17 17377858 17378042 -68060438 + L2 LINE L2 2522 2736 -578 740 208 19 16 chr17 17378166 17378625 -68059855 + ALR/Alpha Satellite centromeric 1 460 -18 929 191 0 0 chr17 17378668 17378825 -68059655 + AluJb SINE Alu 137 293 -19 2016 133 0 3 chr17 17378828 17379146 -68059334 + AluY SINE Alu 1 317 0 4668 176 34 10 chr17 17379151 17380091 -68058389 - L1MC2 LINE L1 -21 6323 5361 283 280 96 57 chr17 17380605 17380762 -68057718 - MIR SINE MIR -88 174 12 2003 142 3 3 chr17 17381411 17381714 -68056766 - AluSg SINE Alu -7 303 1 2158 99 3 0 chr17 17382049 17382369 -68056111 - AluSp SINE Alu 0 321 1 390 293 49 62 chr17 17382960 17383185 -68055295 + MIR SINE MIR 41 262 0 21 57 0 0 chr17 17383223 17383258 -68055222 + AT_rich Low_complexity Low_complexity 1 35 0 2616 87 30 5 chr17 17383433 17383801 -68054679 - L1PA7 LINE L1 -14 6140 5764 1317 263 96 27 chr17 17384555 17384993 -68053487 + LTR40a LTR ERVL 1 468 -51 360 0 0 0 chr17 17385029 17385069 -68053411 + (TA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr17 17385976 17386004 -68052476 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr17 17386877 17386900 -68051580 + AT_rich Low_complexity Low_complexity 1 23 0 7568 26 0 0 chr17 17387015 17388477 -68050003 - L1PA2 LINE L1 0 6155 4690 * 19528 34 2 1 chr17 17388474 17391630 -68046850 + L1PA3 LINE L1 2994 6150 -5 867 230 126 44 chr17 17391850 17392167 -68046313 - MLT1A2 LTR MaLR -47 343 1 * 948 184 39 30 chr17 17392167 17392400 -68046080 + Charlie1b DNA MER1_type 97 331 -192 1720 260 69 57 chr17 17392418 17392521 -68045959 + L1M4 LINE L1 3154 3254 -2892 2043 133 7 0 chr17 17392521 17392815 -68045665 + AluSq SINE Alu 3 298 -15 1720 260 69 57 chr17 17392815 17393695 -68044785 + L1M4 LINE L1 3254 4149 -1997 572 226 151 14 chr17 17393708 17393728 -68044752 + L1M4 LINE L1 4349 4365 -1781 1310 202 10 46 chr17 17393728 17394030 -68044450 + AluJo SINE Alu 1 291 -11 572 226 151 14 chr17 17394030 17394221 -68044259 + L1M4 LINE L1 4365 4589 -1557 473 254 65 82 chr17 17395072 17395704 -68042776 + HSREP522 Satellite telomeric 1 621 -388 217 303 16 16 chr17 17396904 17397026 -68041454 + CT-rich Low_complexity Low_complexity 2 123 0 847 108 69 0 chr17 17397186 17397316 -68041164 - MER85 DNA T2_type 0 139 1 1145 205 29 36 chr17 17398346 17398624 -68039856 + LOR1-int LTR ERV1 2079 2354 -3592 876 129 75 20 chr17 17398623 17398824 -68039656 + LOR1-int LTR ERV1 1839 2050 -6070 * 2133 184 61 4 chr17 17398833 17399306 -68039174 + LOR1-int LTR ERV1 2731 3230 -2716 1662 222 13 33 chr17 17400186 17400646 -68037834 + L1MB8 LINE L1 4132 4582 -1564 2120 205 45 53 chr17 17400646 17401349 -68037131 + L1MB8 LINE L1 4852 6178 0 2560 121 27 20 chr17 17401393 17401841 -68036639 - L1PB1 LINE L1 -3 6148 5698 33 25 0 0 chr17 17402097 17402137 -68036343 + AT_rich Low_complexity Low_complexity 1 40 0 738 211 0 32 chr17 17402946 17403102 -68035378 + MLT2B3 LTR ERVL 384 534 -20 333 147 0 67 chr17 17403106 17403132 -68035348 + Ricksha DNA DNA 840 866 -2380 279 0 0 0 chr17 17403132 17403163 -68035317 + (CA)n Simple_repeat Simple_repeat 2 32 0 333 147 0 67 chr17 17403163 17403211 -68035269 + Ricksha DNA DNA 866 909 -2337 959 247 121 53 chr17 17403515 17403895 -68034585 + MLT2B1 LTR ERVL 113 518 -2 24 67 0 0 chr17 17404705 17404750 -68033730 + AT_rich Low_complexity Low_complexity 1 45 0 473 296 30 56 chr17 17404860 17405093 -68033387 + MLT1E LTR MaLR 30 256 -337 505 180 20 20 chr17 17405156 17405256 -68033224 + MLT1E1 LTR MaLR 504 603 -51 25 31 0 0 chr17 17405286 17405318 -68033162 + AT_rich Low_complexity Low_complexity 1 32 0 1385 209 20 26 chr17 17405727 17406033 -68032447 + AluJo SINE Alu 1 304 -8 2048 115 11 0 chr17 17406194 17406504 -68031976 + AluSg SINE Alu 1 313 0 23 0 0 0 chr17 17407213 17407236 -68031244 + AT_rich Low_complexity Low_complexity 1 23 0 368 265 87 39 chr17 17408413 17408645 -68029835 - LTR33A LTR ERVL -176 347 66 21 0 0 0 chr17 17409121 17409142 -68029338 + AT_rich Low_complexity Low_complexity 1 21 0 7550 26 0 1 chr17 17409142 17410713 -68027767 - L1PA3 LINE L1 -8 6147 4579 11764 34 1 1 chr17 17410713 17412139 -68026341 + L1PA3 LINE L1 3177 4602 -1544 376 190 10 20 chr17 17413733 17413833 -68024647 + CT-rich Low_complexity Low_complexity 1 99 0 714 161 42 0 chr17 17417552 17417670 -68020810 + FLAM_C SINE Alu 1 123 -20 650 64 56 36 chr17 17417672 17418024 -68020456 + (TA)n Simple_repeat Simple_repeat 1 358 0 1583 123 16 118 chr17 17418227 17418600 -68019880 - MER1B DNA MER1_type 0 337 3 29 0 0 0 chr17 17419044 17419073 -68019407 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 17419127 17419155 -68019325 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 17419178 17419207 -68019273 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 17420063 17420087 -68018393 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 17420246 17420269 -68018211 + AT_rich Low_complexity Low_complexity 1 23 0 253 318 65 55 chr17 17420318 17420535 -68017945 - MIR SINE MIR -26 236 18 323 310 184 0 chr17 17421206 17421364 -68017116 + MIR SINE MIR 48 234 -28 223 288 14 27 chr17 17422939 17423085 -68015395 + (TTATA)n Simple_repeat Simple_repeat 3 146 0 389 156 0 0 chr17 17423086 17423150 -68015330 - MLT2B2 LTR ERVL -451 64 1 243 0 0 0 chr17 17423364 17423391 -68015089 + (T)n Simple_repeat Simple_repeat 1 27 0 240 377 8 8 chr17 17423745 17423867 -68014613 + Charlie8 DNA MER1_type 126 247 -2170 1138 188 17 77 chr17 17424023 17424310 -68014170 - AluJo SINE Alu -32 280 11 2175 74 40 10 chr17 17424763 17425060 -68013420 - AluYa5 SINE Alu -5 306 1 2230 79 3 0 chr17 17426061 17426352 -68012128 - AluY SINE Alu -1 310 19 698 64 0 0 chr17 17427082 17427176 -68011304 + AluY SINE Alu 217 310 -1 4000 175 12 33 chr17 17427880 17428726 -68009754 - L1MA7 LINE L1 -5 6286 5459 609 195 132 42 chr17 17428834 17429024 -68009456 - L1MA7 LINE L1 -933 5213 5007 223 217 0 0 chr17 17429042 17429088 -68009392 + L3 LINE CR1 1530 1575 -2 24 0 0 0 chr17 17431783 17431807 -68006673 + AT_rich Low_complexity Low_complexity 1 24 0 30 69 0 0 chr17 17431909 17431967 -68006513 + AT_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr17 17438853 17438874 -67999606 + AT_rich Low_complexity Low_complexity 1 21 0 7212 51 0 0 chr17 17441432 17442331 -67996149 - L1P LINE L1 -1111 5035 4137 488 291 55 25 chr17 17442332 17442531 -67995949 + L2 LINE L2 3109 3313 0 219 260 14 0 chr17 17442848 17442921 -67995559 + T-rich Low_complexity Low_complexity 2 75 0 21 0 0 0 chr17 17443139 17443160 -67995320 + AT_rich Low_complexity Low_complexity 1 21 0 1966 202 53 29 chr17 17443867 17444424 -67994056 + L1MB4 LINE L1 5710 6171 -9 357 125 0 0 chr17 17444427 17444483 -67993997 + (CA)n Simple_repeat Simple_repeat 2 57 0 270 225 56 0 chr17 17444484 17444573 -67993907 + (TA)n Simple_repeat Simple_repeat 2 95 0 308 200 0 105 chr17 17444583 17444678 -67993802 - MLT1C LTR MaLR -330 137 53 7595 30 0 0 chr17 17444874 17445905 -67992575 + L1PA3 LINE L1 5118 6155 0 234 188 0 0 chr17 17445916 17445964 -67992516 + A-rich Low_complexity Low_complexity 1 48 0 1440 239 68 14 chr17 17446350 17446522 -67991958 - MLT1A2 LTR MaLR -4 370 209 366 42 0 0 chr17 17446522 17446570 -67991910 + (GA)n Simple_repeat Simple_repeat 2 49 0 1440 239 68 14 chr17 17446570 17446748 -67991732 - MLT1A2 LTR MaLR -165 209 1 848 253 150 22 chr17 17446986 17447046 -67991434 - MLT1C LTR MaLR -3 464 413 258 32 0 0 chr17 17447046 17447077 -67991403 + (TAA)n Simple_repeat Simple_repeat 2 32 0 848 253 150 22 chr17 17447077 17447383 -67991097 - MLT1C LTR MaLR -54 413 51 22 70 0 0 chr17 17448284 17448327 -67990153 + AT_rich Low_complexity Low_complexity 1 43 0 31 68 0 0 chr17 17449634 17449693 -67988787 + AT_rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr17 17449887 17449910 -67988570 + AT_rich Low_complexity Low_complexity 1 23 0 654 286 17 0 chr17 17449977 17450155 -67988325 + MIR SINE MIR 58 238 -24 29 47 0 0 chr17 17450157 17450200 -67988280 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr17 17450266 17450294 -67988186 + AT_rich Low_complexity Low_complexity 1 28 0 266 210 0 32 chr17 17451216 17451278 -67987202 - L2 LINE L2 0 3313 3254 949 261 44 41 chr17 17451787 17452105 -67986375 + L1MCa LINE L1 7 325 -6101 907 278 20 12 chr17 17452109 17452451 -67986029 + L1MCa LINE L1 2566 2910 -3516 390 275 18 18 chr17 17452515 17452624 -67985856 + MER5B DNA MER1_type 64 172 -6 25 51 0 0 chr17 17452759 17452798 -67985682 + AT_rich Low_complexity Low_complexity 1 39 0 380 80 16 277 chr17 17452819 17453007 -67985473 + L1MA8 LINE L1 6010 6148 -143 21 57 0 0 chr17 17453765 17453800 -67984680 + AT_rich Low_complexity Low_complexity 1 35 0 2053 133 0 0 chr17 17454579 17454914 -67983566 + AluSq SINE Alu 1 313 0 21 36 0 0 chr17 17456426 17456454 -67982026 + AT_rich Low_complexity Low_complexity 1 28 0 681 293 43 34 chr17 17456968 17457320 -67981160 - L1ME1 LINE L1 -2 6164 5810 * 4046 217 62 13 chr17 17457319 17458595 -67979885 - L1MC2 LINE L1 -8 6336 4901 1427 271 73 44 chr17 17458616 17459432 -67979048 - L1ME1 LINE L1 -363 5803 4967 23 33 0 0 chr17 17459446 17459476 -67979004 + AT_rich Low_complexity Low_complexity 1 30 0 1557 75 4 18 chr17 17459917 17460144 -67978336 - L1PA6 LINE L1 -7 6147 5924 1967 93 14 4 chr17 17460753 17461060 -67977420 - AluY SINE Alu 0 310 1 24 77 0 0 chr17 17461195 17461247 -67977233 + AT_rich Low_complexity Low_complexity 1 52 0 272 203 0 0 chr17 17461445 17461509 -67976971 + L1MA2 LINE L1 6241 6304 0 2916 97 0 35 chr17 17461639 17462103 -67976377 - LTR7 LTR ERV1 -2 448 1 819 142 0 0 chr17 17462794 17462921 -67975559 - AluSg/x SINE Alu -18 292 166 2374 128 3 10 chr17 17463011 17463395 -67975085 - L1PA13 LINE L1 -6 6157 5777 217 228 33 11 chr17 17463474 17463566 -67974914 + (TAGA)n Simple_repeat Simple_repeat 2 95 0 235 250 11 11 chr17 17463585 17463673 -67974807 - L1MC4 LINE L1 -1340 6702 6615 457 214 0 16 chr17 17463683 17463865 -67974615 + (TA)n Simple_repeat Simple_repeat 1 179 0 180 27 81 0 chr17 17463887 17463924 -67974556 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1200 280 81 41 chr17 17463956 17464386 -67974094 + L1ME3A LINE L1 2292 2703 -3443 508 29 29 0 chr17 17464386 17464456 -67974024 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 1200 280 81 41 chr17 17464456 17465195 -67973285 + L1ME3A LINE L1 2703 3508 -2638 560 277 100 59 chr17 17465272 17465901 -67972579 + L1ME3A LINE L1 4422 5076 -1070 1423 175 34 20 chr17 17466127 17466419 -67972061 + AluJb SINE Alu 1 296 -16 22 56 0 0 chr17 17466493 17466529 -67971951 + AT_rich Low_complexity Low_complexity 1 36 0 323 325 84 40 chr17 17466550 17466799 -67971681 + L1ME3A LINE L1 5417 5676 -494 221 200 0 36 chr17 17466799 17466854 -67971626 + (TATG)n Simple_repeat Simple_repeat 3 55 0 277 301 53 15 chr17 17466863 17466996 -67971484 + L1ME3A LINE L1 5657 5794 -376 310 316 92 31 chr17 17467036 17467232 -67971248 + L1ME3A LINE L1 5963 6170 0 444 322 62 5 chr17 17467274 17467482 -67970998 + MIR SINE MIR 32 251 -11 21 57 0 0 chr17 17467482 17467517 -67970963 + AT_rich Low_complexity Low_complexity 1 35 0 180 399 22 29 chr17 17467847 17467985 -67970495 - L2 LINE L2 -209 3063 2927 297 0 0 0 chr17 17468184 17468217 -67970263 + (CA)n Simple_repeat Simple_repeat 2 34 0 1259 256 55 39 chr17 17469248 17469760 -67968720 + L1ME3A LINE L1 5651 6170 0 1689 189 7 0 chr17 17469814 17470121 -67968359 + AluJb SINE Alu 4 312 0 251 106 21 21 chr17 17470262 17470309 -67968171 - HERVL LTR ERVL -3762 1892 1846 517 375 37 17 chr17 17470418 17470826 -67967654 - HERVL LTR ERVL -4011 1753 1338 224 333 0 12 chr17 17471542 17471623 -67966857 + L2 LINE L2 3234 3313 0 198 262 49 0 chr17 17471727 17471788 -67966692 - L2 LINE L2 -1497 1817 1754 421 66 16 0 chr17 17471860 17471921 -67966559 - L1MA9 LINE L1 -167 6145 6084 245 318 88 0 chr17 17474353 17474523 -67963957 + L1M4 LINE L1 3805 3989 -2157 1680 201 54 44 chr17 17475093 17475502 -67962978 + MSTC LTR MaLR 16 428 0 1015 368 49 76 chr17 17475989 17476383 -67962097 + L2 LINE L2 1345 1748 -1566 687 78 10 0 chr17 17476383 17476486 -67961994 - L1PA13 LINE L1 0 6163 6060 1015 368 49 76 chr17 17476486 17477144 -67961336 + L2 LINE L2 1748 2369 -945 1085 121 0 0 chr17 17477146 17477295 -67961185 - AluY SINE Alu -162 149 1 190 27 0 81 chr17 17478222 17478259 -67960221 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 750 231 160 53 chr17 17478713 17479050 -67959430 + MLT1A2 LTR MaLR 2 374 0 2133 97 10 0 chr17 17479422 17479710 -67958770 - AluSq SINE Alu -22 291 1 1286 176 81 18 chr17 17479809 17480081 -67958399 + MER7A DNA MER2_type 4 290 -56 1226 139 23 19 chr17 17480076 17480292 -67958188 + MER67C LTR ERV1 494 710 0 * 22 0 0 0 chr17 17480706 17480728 -67957752 + AT_rich Low_complexity Low_complexity 1 22 0 195 400 88 0 chr17 17481716 17481841 -67956639 + L2 LINE L2 3137 3272 0 265 177 42 21 chr17 17481845 17481941 -67956539 + (TA)n Simple_repeat Simple_repeat 2 99 0 207 69 0 0 chr17 17481944 17481973 -67956507 + (CA)n Simple_repeat Simple_repeat 2 30 0 2102 129 0 13 chr17 17482920 17483230 -67955250 - AluSx SINE Alu -6 306 1 30 27 0 0 chr17 17483238 17483275 -67955205 + AT_rich Low_complexity Low_complexity 1 37 0 237 358 30 15 chr17 17483340 17483474 -67955006 + L2 LINE L2 2231 2366 -948 572 227 17 160 chr17 17483524 17483762 -67954718 - MER20 DNA MER1_type -15 204 1 186 182 23 23 chr17 17484232 17484276 -67954204 + MIR SINE MIR 216 259 -3 22 56 0 0 chr17 17485214 17485250 -67953230 + AT_rich Low_complexity Low_complexity 1 36 0 301 295 0 0 chr17 17486448 17486509 -67951971 + MER45 DNA AcHobo 12 72 -1509 422 233 44 0 chr17 17486801 17486891 -67951589 + MER58B DNA MER1_type 245 338 -3 387 238 67 113 chr17 17487038 17487278 -67951202 + MLT1C LTR MaLR 8 236 -231 704 266 49 45 chr17 17487301 17487568 -67950912 + MLT1C LTR MaLR 192 459 -8 243 103 0 0 chr17 17488997 17489036 -67949444 + (TG)n Simple_repeat Simple_repeat 2 40 0 2322 70 3 19 chr17 17489659 17489972 -67948508 - AluY SINE Alu -3 308 1 734 86 138 0 chr17 17490390 17490506 -67947974 + MER39 LTR ERV1 1 132 -575 2091 132 81 51 chr17 17490506 17490915 -67947565 - MER4B LTR ERV1 -186 424 4 566 193 187 36 chr17 17490936 17491102 -67947378 + MER34C LTR ERV1 4 194 -391 3173 159 40 10 chr17 17491104 17491126 -67947354 + LTR49 LTR ERV1 1 21 -574 1693 170 43 32 chr17 17491126 17491497 -67946983 - THE1C LTR MaLR 0 375 1 3173 159 40 10 chr17 17491497 17492052 -67946428 + LTR49 LTR ERV1 21 595 0 266 220 127 17 chr17 17492101 17492219 -67946261 + LTR48 LTR ERV1 356 486 -301 318 219 101 17 chr17 17492251 17492370 -67946110 + LTR48 LTR ERV1 609 737 -50 1577 198 52 6 chr17 17492540 17492868 -67945612 + MER61A LTR ERV1 1 343 0 991 159 6 0 chr17 17492908 17493065 -67945415 + AluJo SINE Alu 12 169 -143 577 274 84 26 chr17 17493276 17493466 -67945014 - MER67D LTR ERV1 -8 506 306 1191 239 6 61 chr17 17493513 17493840 -67944640 - MER67D LTR ERV1 -203 311 3 3720 101 18 2 chr17 17493873 17494418 -67944062 + MER41A LTR ERV1 1 554 0 23 54 0 0 chr17 17495732 17495769 -67942711 + AT_rich Low_complexity Low_complexity 1 37 0 1851 153 19 7 chr17 17496632 17496939 -67941541 + MER7A DNA MER2_type 2 310 -36 2308 70 7 3 chr17 17496957 17497256 -67941224 - AluY SINE Alu -5 306 7 1507 80 0 15 chr17 17497266 17497466 -67941014 - AluSc SINE Alu -20 289 93 375 265 68 14 chr17 17498203 17498350 -67940130 - MER106B DNA MER1_type -1 1058 904 208 310 42 0 chr17 17499291 17499362 -67939118 + L2 LINE L2 2996 3069 -203 193 135 39 0 chr17 17499527 17499579 -67938901 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 225 218 39 13 chr17 17500552 17500630 -67937850 + A-rich Low_complexity Low_complexity 5 84 0 21 82 0 0 chr17 17501595 17501644 -67936836 + AT_rich Low_complexity Low_complexity 1 49 0 198 0 0 0 chr17 17501849 17501871 -67936609 + (TA)n Simple_repeat Simple_repeat 1 22 0 230 210 48 0 chr17 17505212 17505274 -67933206 - L1ME LINE L1 -237 5929 5865 2159 80 17 10 chr17 17505476 17505764 -67932716 + AluY SINE Alu 1 290 -21 423 184 80 16 chr17 17505782 17505907 -67932573 + L1 LINE L1 5191 5323 -823 210 375 0 0 chr17 17506820 17506916 -67931564 + CT-rich Low_complexity Low_complexity 4 99 0 1678 214 3 3 chr17 17508051 17508354 -67930126 + AluJo SINE Alu 2 304 -8 966 96 0 22 chr17 17508638 17508773 -67929707 - FLAM_C SINE Alu 0 133 2 809 295 76 28 chr17 17510067 17510565 -67927915 + MER90 LTR ERV1 70 591 -23 320 204 75 11 chr17 17510923 17511016 -67927464 + L1MD3 LINE L1 7897 7995 0 303 279 84 58 chr17 17511423 17511577 -67926903 - L1ME LINE L1 -5591 479 322 535 157 14 29 chr17 17511584 17511724 -67926756 + C-rich Low_complexity Low_complexity 5 142 0 1207 165 10 0 chr17 17511724 17511918 -67926562 - AluJo SINE Alu -45 267 72 3599 43 39 2 chr17 17513188 17513630 -67924850 + L1PA6 LINE L1 5693 6150 -4 256 320 16 25 chr17 17514635 17514757 -67923723 + G-rich Low_complexity Low_complexity 1 121 0 290 302 11 44 chr17 17514894 17515076 -67923404 + G-rich Low_complexity Low_complexity 2 177 0 209 270 0 59 chr17 17515134 17515286 -67923194 + GA-rich Low_complexity Low_complexity 3 145 0 21 36 0 0 chr17 17517397 17517425 -67921055 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 17517940 17517969 -67920511 + AT_rich Low_complexity Low_complexity 1 29 0 187 337 163 12 chr17 17518759 17518845 -67919635 + MIR SINE MIR 156 254 -8 240 235 0 0 chr17 17519007 17519058 -67919422 - MLT1E1 LTR MaLR 0 593 543 1112 217 37 51 chr17 17519118 17519208 -67919272 - MLT1E1 LTR MaLR -303 351 261 1767 141 79 7 chr17 17519208 17519499 -67918981 - AluJb SINE Alu 0 312 1 1112 217 37 51 chr17 17519499 17519763 -67918717 - MLT1E1 LTR MaLR -393 261 2 2803 136 7 15 chr17 17522065 17522522 -67915958 + L1PA16 LINE L1 5705 6157 -9 39040 73 9 1 chr17 17524063 17529609 -67908871 + L1P2 LINE L1 11 5595 -559 262 221 39 26 chr17 17529723 17529877 -67908603 + (TGGG)n Simple_repeat Simple_repeat 1 156 0 * 377 197 0 83 chr17 17529788 17529981 -67908499 + G-rich Low_complexity Low_complexity 2 178 0 5344 78 0 1 chr17 17530008 17530700 -67907780 + L1PA5 LINE L1 5462 6152 -2 794 208 72 5 chr17 17531728 17531935 -67906545 - L1M4 LINE L1 -5144 1398 1178 1621 156 8 4 chr17 17531937 17532194 -67906286 + AluSq SINE Alu 1 258 -55 1698 153 39 0 chr17 17532298 17532576 -67905904 + AluJo SINE Alu 21 308 0 1721 274 93 28 chr17 17532578 17533319 -67905161 - L1M4 LINE L1 -5731 811 23 494 276 136 5 chr17 17533329 17533550 -67904930 + Charlie2 DNA MER1_type 69 318 -2464 1357 218 57 35 chr17 17533569 17534059 -67904421 + Charlie2 DNA MER1_type 1866 2366 -496 266 307 24 24 chr17 17535124 17535251 -67903229 + MLT1J2 LTR MaLR 80 206 -244 462 276 50 50 chr17 17535678 17535764 -67902716 - MIR SINE MIR -21 241 156 1978 158 3 13 chr17 17535764 17536075 -67902405 - AluJo SINE Alu -4 308 1 462 276 50 50 chr17 17536075 17536209 -67902271 - MIR SINE MIR -105 157 21 743 175 8 0 chr17 17536569 17536689 -67901791 - FLAM_C SINE Alu -21 122 2 275 317 50 0 chr17 17536735 17536836 -67901644 - MIR SINE MIR -148 114 9 1490 150 4 77 chr17 17537153 17537427 -67901053 - AluJo SINE Alu -54 258 5 972 210 38 0 chr17 17538171 17538238 -67900242 - AluJo SINE Alu -117 195 132 180 0 0 0 chr17 17538238 17538258 -67900222 + (TTA)n Simple_repeat Simple_repeat 2 21 0 972 210 38 0 chr17 17538258 17538376 -67900104 - AluJo SINE Alu -180 132 3 406 290 101 34 chr17 17538395 17538633 -67899847 + MIR SINE MIR 2 255 -7 316 343 35 0 chr17 17538643 17538815 -67899665 + L1ME3A LINE L1 5988 6165 -5 579 281 65 84 chr17 17541214 17541737 -67896743 + MER34 LTR ERV1 1 513 -29 1514 224 45 65 chr17 17542213 17542890 -67895590 + LTR49-int LTR ERV1 368 1452 -4494 331 246 96 141 chr17 17543569 17543845 -67894635 + L1MEc LINE L1 1994 2281 -3934 1919 175 3 0 chr17 17543845 17544153 -67894327 + AluSx SINE Alu 1 309 -3 331 246 96 141 chr17 17544153 17544360 -67894120 + L1MEc LINE L1 2281 3341 -2874 1352 153 5 5 chr17 17544689 17544911 -67893569 + L1M2 LINE L1 5527 5748 -543 595 216 88 68 chr17 17544911 17545161 -67893319 - LTR48B LTR ERV1 0 644 390 351 278 51 17 chr17 17545213 17545415 -67893065 - LTR48 LTR ERV1 -375 279 9 813 180 6 35 chr17 17545440 17545612 -67892868 + L1MA9 LINE L1 5740 5906 -406 428 162 0 0 chr17 17545613 17545681 -67892799 + Tigger2 DNA MER2_type 2 69 -2649 * 2445 157 25 11 chr17 17545679 17546112 -67892368 + Tigger2 DNA MER2_type 2280 2718 0 1674 146 65 63 chr17 17546141 17546255 -67892225 + L1MA9 LINE L1 5921 6033 -279 2058 138 3 0 chr17 17546255 17546568 -67891912 + AluSx SINE Alu 1 314 0 1674 146 65 63 chr17 17546568 17546835 -67891645 + L1MA9 LINE L1 6033 6304 -8 554 299 68 21 chr17 17547016 17547354 -67891126 + L1MEd LINE L1 897 1250 -4869 1578 235 70 79 chr17 17547430 17548171 -67890309 + L1MC4 LINE L1 7267 8013 -29 2773 53 0 0 chr17 17548171 17548512 -67889968 - L1PA4 LINE L1 -3 6152 5812 1932 128 8 0 chr17 17548513 17548779 -67889701 - AluSx SINE Alu -44 268 1 1578 235 70 79 chr17 17548779 17548817 -67889663 + L1MC4 LINE L1 8012 8041 -1 1869 167 3 10 chr17 17548886 17549186 -67889294 - AluSx SINE Alu -14 298 1 2660 198 92 2 chr17 17549353 17549899 -67888581 + LTR49 LTR ERV1 1 595 0 2064 178 34 36 chr17 17549901 17550373 -67888107 + LTR49-int LTR ERV1 1 472 -5474 1811 145 40 14 chr17 17550373 17550670 -67887810 + AluSx SINE Alu 1 305 -7 2064 178 34 36 chr17 17550670 17551084 -67887396 + LTR49-int LTR ERV1 472 1472 -4474 2430 77 31 0 chr17 17551084 17551408 -67887072 + L1PA10 LINE L1 5835 6168 0 429 188 0 24 chr17 17551510 17551595 -67886885 + LTR49-int LTR ERV1 760 842 -5489 2723 177 16 36 chr17 17551631 17552006 -67886474 + LTR49-int LTR ERV1 841 1203 -5128 2120 126 0 7 chr17 17552006 17552300 -67886180 - AluSc SINE Alu -17 292 1 2723 177 16 36 chr17 17552300 17552472 -67886008 + LTR49-int LTR ERV1 1203 1377 -4954 1011 138 36 6 chr17 17552601 17552768 -67885712 + LTR49-int LTR ERV1 1372 1543 -4788 1880 138 4 4 chr17 17552785 17553061 -67885419 + AluJb SINE Alu 22 297 -15 1483 188 63 0 chr17 17553067 17553228 -67885252 - AluSx SINE Alu -13 299 113 225 0 0 0 chr17 17553228 17553253 -67885227 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1483 188 63 0 chr17 17553253 17553362 -67885118 - AluSx SINE Alu -199 113 12 1294 163 107 63 chr17 17553413 17553562 -67884918 + AluJo SINE Alu 1 169 -143 2375 84 7 0 chr17 17553562 17553858 -67884622 + AluSp SINE Alu 1 298 -15 1294 163 107 63 chr17 17553858 17553978 -67884502 + AluJo SINE Alu 169 282 -30 207 114 0 0 chr17 17553981 17554016 -67884464 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 432 194 41 10 chr17 17554016 17554114 -67884366 + LTR49-int LTR ERV1 3124 3224 -3107 6477 155 45 32 chr17 17554131 17555457 -67883023 + LTR49-int LTR ERV1 3703 5045 -1286 6663 125 16 10 chr17 17555557 17556586 -67881894 + LTR49-int LTR ERV1 5013 6047 -284 894 111 25 25 chr17 17556578 17556740 -67881740 + LTR49-int LTR ERV1 6169 6330 -1 * 575 85 0 12 chr17 17556823 17556905 -67881575 + LTR49 LTR ERV1 38 118 -477 1359 158 54 170 chr17 17556957 17557405 -67881075 - MSTD LTR MaLR 0 396 1 1368 233 119 2 chr17 17557510 17557956 -67880524 - MLT1D LTR MaLR -7 498 1 499 208 9 9 chr17 17559941 17560047 -67878433 + MER70B LTR ERVL 472 577 -1 1996 200 60 74 chr17 17561247 17561816 -67876664 + MER72 LTR ERV1 3 563 -159 1273 131 48 0 chr17 17561826 17562032 -67876448 - MER2 DNA MER2_type 0 345 130 1067 93 50 0 chr17 17562057 17562218 -67876262 - MER30 DNA MER1_type -61 169 1 529 183 11 0 chr17 17562218 17562309 -67876171 - MER2 DNA MER2_type -206 139 48 4328 189 24 15 chr17 17562402 17563186 -67875294 - MER21B LTR ERV1 -72 791 1 1696 171 10 24 chr17 17563340 17563658 -67874822 - AluJo SINE Alu 0 314 1 952 162 279 9 chr17 17563703 17563925 -67874555 + MER49 LTR ERV1 1 282 -641 1524 188 32 20 chr17 17563957 17564298 -67874182 + MER4D LTR ERV1 549 893 -10 1493 222 172 0 chr17 17564860 17565302 -67873178 - L1MB7 LINE L1 -7 6177 5660 300 83 0 0 chr17 17565868 17565916 -67872564 + (TG)n Simple_repeat Simple_repeat 2 49 0 1842 205 73 62 chr17 17566386 17566937 -67871543 - MER89 LTR ERV1 -2 557 1 227 247 0 27 chr17 17569056 17569129 -67869351 + (TTA)n Simple_repeat Simple_repeat 3 73 0 233 250 0 0 chr17 17569298 17569354 -67869126 - L1MB7 LINE L1 -574 5668 5613 2575 191 53 4 chr17 17569359 17569866 -67868614 - MER34 LTR ERV1 0 542 11 1067 241 59 46 chr17 17569897 17570159 -67868321 - L1MB7 LINE L1 -751 5395 5138 2358 199 18 64 chr17 17570159 17570756 -67867724 - MER101B LTR ERV1 0 570 1 1067 241 59 46 chr17 17570756 17570904 -67867576 - L1MB7 LINE L1 -1008 5138 5175 2161 128 0 0 chr17 17570904 17571201 -67867279 + AluSg SINE Alu 1 297 -13 1067 241 59 46 chr17 17571201 17571416 -67867064 - L1MB7 LINE L1 -970 5176 4965 4784 130 113 11 chr17 17571430 17572237 -67866243 - MER49 LTR ERV1 -21 902 14 325 258 156 16 chr17 17572292 17572478 -67866002 - L1MB7 LINE L1 -1212 4934 4723 3106 164 28 5 chr17 17572690 17573256 -67865224 - L1MA7 LINE L1 -1 6290 5712 29 98 0 0 chr17 17574745 17574837 -67863643 + AT_rich Low_complexity Low_complexity 1 92 0 281 220 30 23 chr17 17575388 17575520 -67862960 + (TA)n Simple_repeat Simple_repeat 1 133 0 228 111 0 0 chr17 17575592 17575628 -67862852 + (TAG)n Simple_repeat Simple_repeat 1 36 0 670 197 130 14 chr17 17575799 17575918 -67862562 + MER89 LTR ERV1 218 322 -237 1249 236 67 98 chr17 17575918 17576549 -67861931 + LTR9 LTR ERV1 2 612 0 670 197 130 14 chr17 17576549 17576652 -67861828 + MER89 LTR ERV1 322 466 -93 2387 147 11 69 chr17 17576664 17576924 -67861556 + L1MC1 LINE L1 5846 6067 -266 4508 138 19 38 chr17 17576924 17577718 -67860762 + MER4E LTR ERV1 1 779 0 2387 147 11 69 chr17 17577718 17577933 -67860547 + L1MC1 LINE L1 6067 6293 -40 881 241 30 31 chr17 17577945 17578435 -67860045 - MER34B LTR ERV1 -12 530 1 951 241 128 48 chr17 17578499 17579029 -67859451 + MER34C LTR ERV1 1 786 -1 1240 176 39 19 chr17 17579202 17579265 -67859215 + LTR54 LTR ERV1 1 61 -449 4459 157 15 18 chr17 17579265 17580050 -67858430 + LTR39 LTR ERV1 1 783 0 1240 176 39 19 chr17 17580050 17580427 -67858053 + LTR54 LTR ERV1 61 510 0 489 227 0 9 chr17 17581076 17581186 -67857294 - L1MC/D LINE L1 -586 5773 5665 291 229 43 0 chr17 17581274 17581344 -67857136 - MER77 LTR ERV1 -366 239 167 184 303 61 10 chr17 17581489 17581588 -67856892 - L3 LINE CR1 -106 1471 1368 1804 172 3 14 chr17 17581841 17582138 -67856342 - AluJb SINE Alu -13 299 6 1909 137 28 0 chr17 17582183 17582467 -67856013 + AluSx SINE Alu 1 292 -20 250 218 10 0 chr17 17582730 17582807 -67855673 + MER5A DNA MER1_type 4 81 -108 2155 131 0 0 chr17 17583373 17583664 -67854816 - AluSx SINE Alu -21 291 1 2503 81 0 0 chr17 17584463 17584772 -67853708 + AluY SINE Alu 1 309 -2 214 265 41 10 chr17 17585509 17585607 -67852873 + MER5A DNA MER1_type 9 109 -80 316 257 27 112 chr17 17585669 17585856 -67852624 - MER5A DNA MER1_type 0 189 19 547 113 12 0 chr17 17585967 17586047 -67852433 + AluJ/FLAM SINE Alu 11 91 -221 29 0 0 0 chr17 17586767 17586796 -67851684 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 17587353 17587381 -67851099 + AT_rich Low_complexity Low_complexity 1 28 0 327 85 0 0 chr17 17587479 17587526 -67850954 + (CA)n Simple_repeat Simple_repeat 1 47 0 1231 178 14 0 chr17 17587993 17588201 -67850279 - HERVL74 LTR ERVL -3657 2028 1818 863 150 0 0 chr17 17588201 17588334 -67850146 + AluJb SINE Alu 159 291 -21 201 132 0 0 chr17 17588362 17588400 -67850080 + (CA)n Simple_repeat Simple_repeat 1 38 0 213 247 124 22 chr17 17588767 17588856 -67849624 + MIR SINE MIR 149 246 -16 1633 173 11 0 chr17 17588987 17589265 -67849215 - AluJb SINE Alu -30 282 2 231 212 91 15 chr17 17590196 17590262 -67848218 - L1P LINE L1 -3329 2817 2747 463 239 58 85 chr17 17590609 17590939 -67847541 - L2 LINE L2 -539 2775 2455 252 270 27 47 chr17 17590977 17591179 -67847301 - L2 LINE L2 -1083 2231 1959 1099 208 5 0 chr17 17591629 17591826 -67846654 + AluJo SINE Alu 10 207 -105 269 213 37 0 chr17 17593073 17593181 -67845299 + (CGGGG)n Simple_repeat Simple_repeat 3 114 0 234 231 0 0 chr17 17594572 17594637 -67843843 - MIR SINE MIR -34 228 164 21 0 0 0 chr17 17594924 17594945 -67843535 + AT_rich Low_complexity Low_complexity 1 21 0 1976 67 0 8 chr17 17595129 17595367 -67843113 + AluY SINE Alu 69 304 -7 289 313 99 8 chr17 17595524 17595655 -67842825 + L1MEd LINE L1 554 696 -5509 306 274 26 8 chr17 17595864 17595981 -67842499 + L1M3de LINE L1 1784 1902 -4751 * 1532 225 69 14 chr17 17595980 17596416 -67842064 + L1MEd LINE L1 1640 2099 -4297 3612 84 2 8 chr17 17596420 17596920 -67841560 + L1PB1 LINE L1 5294 5790 -361 241 152 0 0 chr17 17596946 17596992 -67841488 + LTR66 LTR ERVL 394 439 -171 2636 91 14 6 chr17 17597017 17597381 -67841099 + L1PB1 LINE L1 5783 6149 -2 1499 293 84 11 chr17 17597389 17597996 -67840484 - L2 LINE L2 -1213 2101 1451 2411 97 0 0 chr17 17598656 17598954 -67839526 + AluY SINE Alu 1 298 -13 4183 232 42 24 chr17 17598978 17599567 -67838913 + L1MEd LINE L1 2111 2688 -3527 2111 128 3 3 chr17 17599567 17599883 -67838597 + AluSx SINE Alu 2 312 0 4183 232 42 24 chr17 17599883 17600756 -67837724 + L1MEd LINE L1 2688 3557 -2658 232 143 0 0 chr17 17600763 17600798 -67837682 - U2 snRNA snRNA -153 35 1 1451 155 0 30 chr17 17600827 17601059 -67837421 + AluSq SINE Alu 1 225 -88 1166 149 0 11 chr17 17600951 17601051 -67837429 + AluSg/x SINE Alu 119 218 -94 6422 116 30 19 chr17 17601051 17602108 -67836372 + MER11C LTR ERVK 1 1069 -2 1166 149 0 11 chr17 17602108 17602188 -67836292 + AluSg/x SINE Alu 218 297 -15 1951 136 6 29 chr17 17602189 17602505 -67835975 + AluSx SINE Alu 3 311 -1 3742 239 27 16 chr17 17602506 17603340 -67835140 + L1MEd LINE L1 3571 4423 -1792 492 165 18 0 chr17 17603340 17603449 -67835031 + L1MA8 LINE L1 6177 6287 -4 3742 239 27 16 chr17 17603449 17603708 -67834772 + L1MEd LINE L1 4423 4677 -1538 3445 150 39 18 chr17 17603966 17604638 -67833842 - L1MB3 LINE L1 -202 5981 5296 1019 246 123 3 chr17 17604752 17604932 -67833548 - L1ME3A LINE L1 -8 6162 5983 1139 257 86 29 chr17 17604932 17605730 -67832750 - L1MB1 LINE L1 -242 5947 5079 427 270 14 54 chr17 17606592 17606740 -67831740 + L1ME1 LINE L1 5946 6087 -79 1445 223 45 34 chr17 17607805 17608251 -67830229 - LTR43 LTR ERV1 0 634 120 2866 134 4 2 chr17 17609015 17609477 -67829003 - MER4C LTR ERV1 -2 463 1 3061 134 24 26 chr17 17609766 17610341 -67828139 - MER4B LTR ERV1 -36 574 1 3680 159 21 3 chr17 17610341 17611342 -67827138 - MER4B-int LTR ERV1 0 6758 5705 6473 133 25 3 chr17 17611346 17612340 -67826140 - L1P LINE L1 -1456 4690 3668 324 0 0 0 chr17 17612340 17612376 -67826104 + (TG)n Simple_repeat Simple_repeat 2 37 0 6473 133 25 3 chr17 17612376 17612468 -67826012 - L1P LINE L1 -2478 3668 3580 3728 120 11 5 chr17 17612457 17613467 -67825013 + L1PA8A LINE L1 4693 5709 -422 * 333 0 0 0 chr17 17614155 17614192 -67824288 + (CA)n Simple_repeat Simple_repeat 2 38 0 2925 269 48 36 chr17 17614282 17615817 -67822663 - SST1 Satellite centromeric -11 1552 1 336 24 0 0 chr17 17616517 17616558 -67821922 + (CA)n Simple_repeat Simple_repeat 2 42 0 2910 269 48 36 chr17 17616654 17618184 -67820296 - SST1 Satellite centromeric -15 1548 1 423 0 0 0 chr17 17618883 17618930 -67819550 + (CA)n Simple_repeat Simple_repeat 2 48 0 2909 269 48 36 chr17 17619026 17620556 -67817924 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 17621256 17621309 -67817171 + (CA)n Simple_repeat Simple_repeat 2 54 0 2906 270 50 35 chr17 17621405 17622931 -67815549 - SST1 Satellite centromeric -15 1548 1 444 19 0 0 chr17 17623631 17623684 -67814796 + (CA)n Simple_repeat Simple_repeat 2 54 0 2351 262 56 42 chr17 17623780 17625092 -67813388 - SST1 Satellite centromeric -15 1548 219 2694 168 63 26 chr17 17626841 17627284 -67811196 + MER4B-int LTR ERV1 5099 5571 -1187 1270 179 124 43 chr17 17627284 17627631 -67810849 - THE1C LTR MaLR 0 375 1 2694 168 63 26 chr17 17627631 17627790 -67810690 + MER4B-int LTR ERV1 5571 5723 -1035 5749 97 4 0 chr17 17627792 17628614 -67809866 - L1PA8A LINE L1 -2 6129 5305 1680 135 17 7 chr17 17628714 17629003 -67809477 + L1PA8A LINE L1 5838 6129 -2 3310 152 55 31 chr17 17629005 17629164 -67809316 - MER4B-int LTR ERV1 -1035 5723 5569 1270 179 124 43 chr17 17629164 17629511 -67808969 + THE1C LTR MaLR 1 375 0 3310 152 55 31 chr17 17629511 17630054 -67808426 - MER4B-int LTR ERV1 -1189 5569 5004 834 178 25 0 chr17 17630044 17630201 -67808279 - MER4B-int LTR ERV1 -2277 4481 4321 * 855 214 44 15 chr17 17630205 17630411 -67808069 - MER4B-int LTR ERV1 -2572 4186 3975 1119 282 28 23 chr17 17630425 17630815 -67807665 - SST1 Satellite centromeric -1171 392 1 191 125 25 0 chr17 17631546 17631586 -67806894 + GA-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 17631593 17631634 -67806846 + (CA)n Simple_repeat Simple_repeat 2 42 0 1852 273 89 38 chr17 17631667 17632760 -67805720 - SST1 Satellite centromeric -21 1542 395 438 259 56 35 chr17 17632783 17632980 -67805500 - SST1 Satellite centromeric -1362 201 1 243 103 0 0 chr17 17633677 17633716 -67804764 + (CA)n Simple_repeat Simple_repeat 2 40 0 2585 286 55 40 chr17 17633806 17635335 -67803145 - SST1 Satellite centromeric -11 1552 1 459 0 0 0 chr17 17636035 17636086 -67802394 + (CA)n Simple_repeat Simple_repeat 2 52 0 2846 270 51 36 chr17 17636182 17637707 -67800773 - SST1 Satellite centromeric -15 1548 1 477 0 0 0 chr17 17638407 17638460 -67800020 + (CA)n Simple_repeat Simple_repeat 2 54 0 2863 269 48 36 chr17 17638556 17640085 -67798395 - SST1 Satellite centromeric -15 1548 1 731 306 92 33 chr17 17640488 17641155 -67797325 - SST1 Satellite centromeric -11 1552 847 951 259 4 16 chr17 17641156 17641403 -67797077 - AluJo SINE Alu -54 258 15 1049 210 55 107 chr17 17642658 17643043 -67795437 - MLT1A1 LTR MaLR 0 365 1 758 261 78 52 chr17 17643402 17643724 -67794756 - L1P4 LINE L1 -364 5804 5492 2398 92 5 43 chr17 17643724 17644093 -67794387 + THE1A LTR MaLR 1 355 0 10779 117 2 1 chr17 17644093 17645672 -67792808 + THE1A-int LTR MaLR 1 1580 0 2038 156 23 0 chr17 17645672 17646019 -67792461 + THE1A LTR MaLR 1 355 0 758 261 78 52 chr17 17646019 17646330 -67792150 - L1P4 LINE L1 -676 5492 5190 1683 146 107 7 chr17 17646330 17646611 -67791869 - AluSx SINE Alu -1 311 3 758 261 78 52 chr17 17646611 17647102 -67791378 - L1P4 LINE L1 -978 5190 4647 27 0 0 0 chr17 17647113 17647140 -67791340 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr17 17647140 17647162 -67791318 + (GA)n Simple_repeat Simple_repeat 2 23 0 1465 189 0 42 chr17 17647162 17647447 -67791033 - AluJo SINE Alu -39 273 1 21 36 0 0 chr17 17648208 17648236 -67790244 + AT_rich Low_complexity Low_complexity 1 28 0 2156 121 0 0 chr17 17648413 17648720 -67789760 - AluSq SINE Alu 0 307 1 321 284 37 9 chr17 17648764 17648873 -67789607 - HAL1b LINE L1 -1 1347 1236 1889 162 3 3 chr17 17648947 17649244 -67789236 - AluSx SINE Alu -13 299 3 761 197 0 0 chr17 17649469 17649601 -67788879 - FLAM_C SINE Alu -1 132 1 1615 177 7 17 chr17 17650060 17650360 -67788120 + AluJb SINE Alu 1 297 -15 4263 141 46 4 chr17 17650362 17651042 -67787438 + Tigger1 DNA MER2_type 1066 1773 -645 2072 120 41 0 chr17 17651042 17651333 -67787147 - AluSp SINE Alu -10 303 1 770 258 36 10 chr17 17651390 17651584 -67786896 + MER115 DNA AcHobo 445 643 -50 305 99 50 20 chr17 17651765 17651866 -67786614 + (TTATA)n Simple_repeat Simple_repeat 2 105 0 3739 131 14 44 chr17 17651887 17652389 -67786091 + Tigger1 DNA MER2_type 1802 2283 -135 1940 126 40 0 chr17 17652389 17652667 -67785813 - AluSx SINE Alu -22 290 2 3739 131 14 44 chr17 17652667 17652800 -67785680 + Tigger1 DNA MER2_type 2283 2418 0 468 314 103 35 chr17 17652803 17653173 -67785307 - LTR16C LTR ERVL -17 474 80 1126 274 112 26 chr17 17653280 17653828 -67784652 + MER115 DNA AcHobo 10 643 -50 1715 120 14 18 chr17 17654229 17654513 -67783967 - L1MA4 LINE L1 0 6300 6018 378 246 112 93 chr17 17654800 17655015 -67783465 - MIR SINE MIR 0 262 44 1898 139 0 14 chr17 17655119 17655434 -67783046 + AluSx SINE Alu 7 317 0 288 307 50 0 chr17 17655528 17655629 -67782851 - L2 LINE L2 -15 3298 3193 312 378 32 0 chr17 17656236 17656392 -67782088 - MIR SINE MIR -74 188 28 24 32 0 0 chr17 17656537 17656568 -67781912 + AT_rich Low_complexity Low_complexity 1 31 0 282 306 32 19 chr17 17656798 17656955 -67781525 + L1M4 LINE L1 3707 3865 -2281 602 89 0 11 chr17 17657051 17657141 -67781339 - L1PA16 LINE L1 -9 6157 6069 630 232 0 43 chr17 17657379 17657517 -67780963 + FLAM_A SINE Alu 1 132 -1 1521 200 31 9 chr17 17657518 17657857 -67780623 - MER93a LTR ERV1 -7 395 4 21 0 0 0 chr17 17658300 17658321 -67780159 + AT_rich Low_complexity Low_complexity 1 21 0 4632 174 44 24 chr17 17658333 17658822 -67779658 + L1MB3 LINE L1 5099 5577 -606 1992 132 0 4 chr17 17658822 17659146 -67779334 + AluSg SINE Alu 1 323 0 4632 174 44 24 chr17 17659146 17659722 -67778758 + L1MB3 LINE L1 5577 6180 -3 28 79 0 0 chr17 17659730 17659793 -67778687 + AT_rich Low_complexity Low_complexity 1 63 0 27 0 0 0 chr17 17660274 17660301 -67778179 + AT_rich Low_complexity Low_complexity 1 27 0 2227 100 7 3 chr17 17660303 17660602 -67777878 - AluSg SINE Alu -10 300 1 2080 141 0 0 chr17 17661166 17661463 -67777017 + AluSq SINE Alu 1 297 -16 2024 123 4 0 chr17 17661479 17661756 -67776724 + AluSp SINE Alu 4 281 -32 240 43 43 21 chr17 17661757 17661804 -67776676 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 1458 162 4 0 chr17 17661838 17662085 -67776395 - L1M2 LINE L1 -498 5793 5546 1055 157 0 0 chr17 17662255 17662437 -67776043 - AluSg/x SINE Alu 0 312 131 1871 159 0 7 chr17 17662562 17662852 -67775628 + AluJb SINE Alu 1 288 -24 2122 120 3 23 chr17 17663692 17664000 -67774480 + AluSq SINE Alu 5 306 -7 505 304 60 16 chr17 17664131 17664478 -67774002 + L1ME3A LINE L1 5421 5784 -389 46 33 0 0 chr17 17664480 17664540 -67773940 + AT_rich Low_complexity Low_complexity 1 60 0 1895 151 0 0 chr17 17664540 17664825 -67773655 - AluSx SINE Alu -25 287 3 1901 127 16 52 chr17 17664827 17664988 -67773492 - AluSx SINE Alu -16 296 150 1871 133 7 7 chr17 17664988 17665266 -67773214 - AluSc SINE Alu -20 289 12 1901 127 16 52 chr17 17665266 17665411 -67773069 - AluSx SINE Alu -162 150 1 254 237 54 21 chr17 17665451 17665544 -67772936 + L1ME3A LINE L1 5852 5947 -223 1578 130 4 29 chr17 17665590 17665836 -67772644 + AluSg/x SINE Alu 65 304 -8 1479 93 6 0 chr17 17666185 17666367 -67772113 + AluSq SINE Alu 1 183 -130 232 206 162 0 chr17 17666368 17666436 -67772044 + AluSq SINE Alu 223 301 -2 788 182 6 3 chr17 17666705 17666869 -67771611 + L1MA9 LINE L1 5803 5969 -331 2166 135 0 3 chr17 17666869 17667180 -67771300 + AluSg SINE Alu 1 310 0 228 338 76 14 chr17 17667826 17667971 -67770509 + MIR SINE MIR 21 174 -88 4895 174 39 10 chr17 17668482 17669418 -67769062 + L1MC2 LINE L1 5361 6323 -21 2019 134 0 0 chr17 17669423 17669736 -67768744 - AluY SINE Alu 0 313 1 978 185 0 0 chr17 17669739 17669896 -67768584 - AluJb SINE Alu -19 293 137 1303 208 44 6 chr17 17669901 17670211 -67768269 + L1MC/D LINE L1 5370 5626 -718 33 25 0 0 chr17 17670211 17670251 -67768229 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr17 17670430 17670453 -67768027 + AT_rich Low_complexity Low_complexity 1 23 0 1125 140 5 50 chr17 17670723 17670923 -67767557 + AluSx SINE Alu 1 191 -121 542 187 24 24 chr17 17671004 17671127 -67767353 - L2 LINE L2 -4 3309 3187 1080 115 0 0 chr17 17671165 17671304 -67767176 + AluSq/x SINE Alu 3 141 -172 2106 107 3 27 chr17 17671304 17671603 -67766877 + AluSx SINE Alu 1 292 -20 843 127 14 28 chr17 17671744 17671886 -67766594 - AluSp/q SINE Alu -2 311 172 2179 136 0 0 chr17 17671924 17672232 -67766248 + AluSg SINE Alu 1 308 -2 529 28 0 0 chr17 17672614 17672686 -67765794 + AluY SINE Alu 240 311 0 2339 221 115 6 chr17 17672714 17673234 -67765246 - MER77 LTR ERV1 -28 577 1 1787 183 3 3 chr17 17673340 17673641 -67764839 - AluJb SINE Alu -11 301 1 482 119 0 0 chr17 17673675 17673742 -67764738 + AluJ/FLAM SINE Alu 2 68 -244 1944 147 7 0 chr17 17673742 17674041 -67764439 + AluSx SINE Alu 1 301 -11 260 243 14 0 chr17 17674042 17674112 -67764368 + (TA)n Simple_repeat Simple_repeat 1 71 0 1544 175 53 23 chr17 17674412 17674715 -67763765 - MER44D DNA MER2_type -1 604 421 359 0 43 0 chr17 17674716 17674762 -67763718 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 6267 16 0 0 chr17 17674763 17675461 -67763019 - L1PA2 LINE L1 0 6155 5458 2657 33 0 3 chr17 17675461 17675792 -67762688 + L1P1 LINE L1 4980 5309 -837 1070 16 0 0 chr17 17675945 17676069 -67762411 + L1P1 LINE L1 5404 5527 -628 894 46 39 0 chr17 17676069 17676199 -67762281 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 1849 171 3 0 chr17 17676221 17676508 -67761972 - AluSx SINE Alu -24 288 1 266 276 57 8 chr17 17676563 17676686 -67761794 + HAL1b LINE L1 1215 1343 -5 1863 151 11 0 chr17 17676829 17677100 -67761380 + AluSx SINE Alu 11 284 -28 1982 126 7 0 chr17 17677189 17677467 -67761013 + AluSx SINE Alu 1 280 -32 198 0 0 0 chr17 17677468 17677490 -67760990 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 285 29 0 0 chr17 17679063 17679097 -67759383 + (TG)n Simple_repeat Simple_repeat 1 34 0 1555 198 3 7 chr17 17679436 17679724 -67758756 - AluJb SINE Alu -21 291 5 583 155 0 3 chr17 17679854 17680092 -67758388 + AluSx SINE Alu 1 312 0 1528 174 47 19 chr17 17680186 17680508 -67757972 - L1MB8 LINE L1 0 6178 5848 839 260 48 70 chr17 17680943 17681425 -67757055 - PABL_B LTR ERV1 -42 625 1 2057 145 3 0 chr17 17681674 17681984 -67756496 - AluSq SINE Alu -2 311 1 2146 110 3 0 chr17 17681986 17682276 -67756204 - AluSx SINE Alu -21 291 1 1101 144 0 6 chr17 17682284 17682458 -67756022 - AluSq SINE Alu -10 303 131 23 0 0 0 chr17 17682460 17682483 -67755997 + AT_rich Low_complexity Low_complexity 1 23 0 587 98 0 0 chr17 17682733 17682815 -67755665 + AluY SINE Alu 217 298 -13 21 0 0 0 chr17 17682908 17682929 -67755551 + AT_rich Low_complexity Low_complexity 1 21 0 2073 122 3 13 chr17 17683101 17683404 -67755076 + AluSx SINE Alu 1 300 -12 2174 142 7 0 chr17 17683696 17684006 -67754474 + AluSx SINE Alu 1 312 0 1864 169 3 22 chr17 17684832 17685145 -67753335 - AluJb SINE Alu -5 307 1 2190 109 3 14 chr17 17685213 17685527 -67752953 + AluSp SINE Alu 1 311 0 2023 157 0 25 chr17 17685602 17685921 -67752559 + AluJo SINE Alu 1 311 -1 2217 119 0 0 chr17 17685921 17686216 -67752264 + AluSc SINE Alu 1 295 -14 1581 154 30 4 chr17 17686216 17686483 -67751997 - MER54A LTR ERVL -627 274 1 1468 153 141 0 chr17 17686660 17686922 -67751558 - AluSx SINE Alu -3 299 1 2288 114 3 0 chr17 17687521 17687819 -67750661 - AluSp SINE Alu -14 299 1 330 243 0 0 chr17 17687955 17688025 -67750455 + AluS SINE Alu 226 295 -6 1021 156 0 54 chr17 17688027 17688042 -67750438 + AluSg/x SINE Alu 120 134 -178 2322 104 3 0 chr17 17688042 17688351 -67750129 + AluSq SINE Alu 2 311 -2 1021 156 0 54 chr17 17688351 17688521 -67749959 + AluSg/x SINE Alu 134 295 -17 705 188 0 0 chr17 17688730 17688847 -67749633 + FLAM_C SINE Alu 1 117 -16 267 54 0 0 chr17 17688850 17688887 -67749593 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 443 147 0 0 chr17 17688913 17688981 -67749499 + AluJ/FRAM SINE Alu 225 292 -20 288 102 0 0 chr17 17689230 17689279 -67749201 + (T)n Simple_repeat Simple_repeat 1 49 0 504 16 0 0 chr17 17689280 17689343 -67749137 - L1PA2 LINE L1 -1 6154 6092 1240 217 4 0 chr17 17689545 17689789 -67748691 + AluJb SINE Alu 1 245 -67 1795 124 0 8 chr17 17689789 17690038 -67748442 + AluSx SINE Alu 34 280 -32 777 76 0 0 chr17 17690038 17690143 -67748337 + (GAAA)n Simple_repeat Simple_repeat 3 107 0 1245 222 20 20 chr17 17690152 17690458 -67748022 + AluJo SINE Alu 6 311 -1 3856 169 72 37 chr17 17690512 17691243 -67747237 - MER21B LTR ERV1 0 863 98 2163 108 16 32 chr17 17691243 17691558 -67746922 + AluSx SINE Alu 3 312 0 3856 169 72 37 chr17 17691558 17691660 -67746820 - MER21B LTR ERV1 -765 98 1 1467 172 22 52 chr17 17691961 17692429 -67746051 - LTR25 LTR ERV1 -47 747 362 803 141 263 29 chr17 17692429 17692741 -67745739 + LTR46 LTR ERV1 1 460 0 627 198 26 0 chr17 17692741 17692845 -67745635 - LTR25 LTR ERV1 -438 356 250 459 136 30 121 chr17 17692839 17692971 -67745509 - MER61E LTR ERV1 -417 152 33 * 1390 113 0 0 chr17 17693609 17693794 -67744686 + AluSg/x SINE Alu 114 298 -14 394 269 132 53 chr17 17693795 17694152 -67744328 - L2 LINE L2 -82 3231 2847 274 158 0 0 chr17 17694204 17694242 -67744238 - Alu SINE Alu -262 38 1 2447 93 3 0 chr17 17694607 17694917 -67743563 - AluSx SINE Alu -1 311 1 1693 168 14 0 chr17 17694966 17695258 -67743222 - AluSx SINE Alu -16 296 1 1973 135 10 13 chr17 17695468 17695780 -67742700 + AluSx SINE Alu 1 311 -1 1089 179 168 19 chr17 17695809 17696077 -67742403 - MER106B DNA MER1_type -535 524 217 1929 145 7 7 chr17 17696081 17696377 -67742103 - AluSx SINE Alu -16 296 1 544 153 0 0 chr17 17696388 17696473 -67742007 - AluJ/FLAM SINE Alu -226 86 2 699 232 9 73 chr17 17696473 17696693 -67741787 + L1MC4a LINE L1 6687 6892 -916 2013 116 9 44 chr17 17696695 17697013 -67741467 - AluSq SINE Alu -6 307 1 1329 113 4 74 chr17 17697363 17697592 -67740888 - AluSp SINE Alu -3 310 98 1915 147 0 7 chr17 17697592 17697877 -67740603 - AluSg SINE Alu -16 294 12 2023 136 0 7 chr17 17697896 17698183 -67740297 - AluSg SINE Alu -24 286 2 258 224 0 40 chr17 17698236 17698312 -67740168 - MER89 LTR ERV1 0 559 487 2232 225 9 18 chr17 17698327 17698453 -67740027 - L1P LINE L1 -858 5288 5162 1653 136 11 0 chr17 17698453 17698718 -67739762 - AluSg SINE Alu -1 309 42 2232 225 9 18 chr17 17698718 17699155 -67739325 - L1P LINE L1 -984 5162 4730 2345 158 19 9 chr17 17699164 17699583 -67738897 + L1PA16 LINE L1 5744 6166 0 2109 129 3 0 chr17 17699655 17699964 -67738516 + AluSg SINE Alu 1 310 0 2112 104 0 3 chr17 17700098 17700396 -67738084 + AluY SINE Alu 1 297 -14 2634 200 105 4 chr17 17700659 17701183 -67737297 - MER77 LTR ERV1 -28 577 1 232 277 24 0 chr17 17701185 17701268 -67737212 + L1ME LINE L1 5492 5576 -545 1499 201 7 0 chr17 17701308 17701597 -67736883 - AluJb SINE Alu -21 291 1 221 229 57 19 chr17 17701597 17701630 -67736850 + (TATATG)n Simple_repeat Simple_repeat 6 36 -78 1734 168 7 0 chr17 17701630 17701928 -67736552 + AluSq SINE Alu 1 300 -13 221 229 57 19 chr17 17701928 17701999 -67736481 + (TATATG)n Simple_repeat Simple_repeat 36 114 0 1539 201 17 3 chr17 17702293 17702592 -67735888 - MER44D DNA MER2_type -1 604 430 1604 200 0 0 chr17 17702595 17702989 -67735491 - AluSx SINE Alu 0 394 1 296 274 48 8 chr17 17703042 17703166 -67735314 + HAL1b LINE L1 1215 1343 -5 1995 143 0 0 chr17 17703294 17703594 -67734886 + AluSx SINE Alu 1 300 -12 1904 127 7 7 chr17 17703723 17704015 -67734465 + AluSx SINE Alu 2 293 -19 285 29 0 0 chr17 17705618 17705652 -67732828 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr17 17705968 17705996 -67732484 + AT_rich Low_complexity Low_complexity 1 28 0 1265 187 4 30 chr17 17705996 17706258 -67732222 - AluJb SINE Alu -57 255 1 469 138 4 17 chr17 17706385 17706639 -67731841 + AluSx SINE Alu 1 312 0 1344 181 72 10 chr17 17706698 17707002 -67731478 - L1MB8 LINE L1 0 6178 5856 1556 129 6 129 chr17 17707102 17707428 -67731052 - AluSx SINE Alu -16 286 1 798 141 15 30 chr17 17707430 17707565 -67730915 - AluJo/FLAM SINE Alu -169 133 1 325 250 0 34 chr17 17707565 17707653 -67730827 - MER33 DNA MER1_type -201 123 39 1804 153 11 0 chr17 17707996 17708278 -67730202 - AluSx SINE Alu -17 295 11 2004 106 11 3 chr17 17708397 17708771 -67729709 - AluSq SINE Alu 0 376 1 868 150 7 0 chr17 17708774 17708914 -67729566 - AluYa5 SINE Alu -170 141 1 220 133 22 22 chr17 17709896 17709941 -67728539 + GA-rich Low_complexity Low_complexity 2 46 0 1225 180 131 14 chr17 17709985 17710268 -67728212 - SST1 Satellite centromeric -10 1553 1238 844 158 0 13 chr17 17710274 17710426 -67728054 + AluSg/x SINE Alu 157 306 -6 7611 140 34 27 chr17 17710499 17711895 -67726585 - SST1 Satellite centromeric -157 1406 1 1454 312 48 39 chr17 17712446 17713273 -67725207 - SST1 Satellite centromeric -312 1251 417 492 320 59 0 chr17 17713288 17713507 -67724973 - SST1 Satellite centromeric -1331 232 1 203 265 0 24 chr17 17714210 17714293 -67724187 + (CAGAGA)n Simple_repeat Simple_repeat 2 82 0 * 249 210 16 0 chr17 17714245 17714307 -67724173 + GA-rich Low_complexity Low_complexity 1 63 0 261 0 0 0 chr17 17714307 17714336 -67724144 + (CA)n Simple_repeat Simple_repeat 2 30 0 2526 259 56 42 chr17 17714340 17715713 -67722767 - SST1 Satellite centromeric -1315 1392 1 201 154 0 0 chr17 17716405 17716444 -67722036 + (CA)n Simple_repeat Simple_repeat 2 40 0 219 170 21 0 chr17 17716448 17716495 -67721985 + GA-rich Low_complexity Low_complexity 1 48 0 294 29 0 0 chr17 17716500 17716535 -67721945 + (CA)n Simple_repeat Simple_repeat 2 36 0 1011 243 62 55 chr17 17716572 17717135 -67721345 - SST1 Satellite centromeric -21 1542 976 291 319 97 21 chr17 17717731 17717875 -67720605 + MIR SINE MIR 58 212 -50 369 0 0 0 chr17 17719112 17719153 -67719327 + (TC)n Simple_repeat Simple_repeat 2 42 0 21 57 0 0 chr17 17719417 17719452 -67719028 + AT_rich Low_complexity Low_complexity 1 35 0 671 296 63 35 chr17 17719727 17720045 -67718435 + L1M4 LINE L1 2841 3167 -2979 470 127 13 0 chr17 17720295 17720374 -67718106 - MADE1 DNA Mariner 0 80 1 220 309 82 36 chr17 17720496 17720606 -67717874 - L2 LINE L2 -959 2355 2241 267 324 52 29 chr17 17721575 17721711 -67716769 - L2 LINE L2 0 3272 3134 21 36 0 0 chr17 17722708 17722736 -67715744 + AT_rich Low_complexity Low_complexity 1 28 0 211 269 103 0 chr17 17722961 17723039 -67715441 - L2 LINE L2 -5 3308 3223 21 36 0 0 chr17 17724248 17724276 -67714204 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr17 17724512 17724537 -67713943 + AT_rich Low_complexity Low_complexity 1 25 0 21 82 0 0 chr17 17724722 17724771 -67713709 + AT_rich Low_complexity Low_complexity 1 49 0 1746 143 57 0 chr17 17725085 17725364 -67713116 - AluSq SINE Alu -18 295 1 2173 88 7 3 chr17 17725587 17725894 -67712586 - AluY SINE Alu -3 308 1 2045 133 0 0 chr17 17726061 17726355 -67712125 + AluSx SINE Alu 1 294 -18 3280 164 43 31 chr17 17726881 17727259 -67711221 - L1MA5 LINE L1 -2 6298 5907 2276 77 0 10 chr17 17727259 17727571 -67710909 - AluY SINE Alu -2 309 1 3280 164 43 31 chr17 17727571 17727840 -67710640 - L1MA5 LINE L1 -393 5907 5643 2822 221 30 1 chr17 17727843 17728537 -67709943 + L1MA8 LINE L1 3884 4597 -1549 1703 169 18 32 chr17 17728681 17729019 -67709461 - MER52A LTR ERV1 -1373 382 50 243 240 72 48 chr17 17729255 17729380 -67709100 - MER52A LTR ERV1 -1627 128 1 29 0 0 0 chr17 17729969 17729998 -67708482 + AT_rich Low_complexity Low_complexity 1 29 0 1686 203 0 0 chr17 17730385 17730696 -67707784 + AluSx SINE Alu 1 311 -1 434 238 40 7 chr17 17731551 17731702 -67706778 - L1MA8 LINE L1 -4 6287 6132 * 4252 158 44 45 chr17 17731685 17731984 -67706496 + L1MA8 LINE L1 5254 5552 -739 483 127 13 0 chr17 17731984 17732063 -67706417 + MADE1 DNA Mariner 1 80 0 4252 158 44 45 chr17 17732063 17732694 -67705786 + L1MA8 LINE L1 5552 6183 -108 30 72 0 12 chr17 17733090 17733125 -67705355 + AT_rich Low_complexity Low_complexity 1 35 -47 1798 138 4 0 chr17 17733125 17733401 -67705079 - AluSq SINE Alu -35 278 2 30 72 0 12 chr17 17733401 17733448 -67705032 + AT_rich Low_complexity Low_complexity 35 82 0 191 344 33 27 chr17 17734314 17734451 -67704029 - MIR SINE MIR -42 166 28 524 176 92 11 chr17 17734660 17734841 -67703639 + L1MA8 LINE L1 6104 6291 0 2133 69 24 3 chr17 17735726 17736015 -67702465 - AluY SINE Alu -16 295 1 323 345 115 20 chr17 17738299 17738551 -67699929 - L2 LINE L2 -39 3274 2999 496 275 7 27 chr17 17738589 17738738 -67699742 - L2 LINE L2 -939 2375 2230 581 311 32 32 chr17 17738738 17738989 -67699491 - L2 LINE L2 -2114 1200 950 1742 176 10 0 chr17 17739245 17739541 -67698939 + AluJo SINE Alu 1 299 -13 352 187 8 41 chr17 17739553 17739676 -67698804 + GA-rich Low_complexity Low_complexity 1 119 0 213 231 0 15 chr17 17739682 17739747 -67698733 + A-rich Low_complexity Low_complexity 4 67 0 889 184 0 80 chr17 17740086 17740298 -67698182 + AluJb SINE Alu 90 284 -28 508 296 100 37 chr17 17740312 17740691 -67697789 + L1 LINE L1 2204 2606 -3540 329 309 57 0 chr17 17740804 17740927 -67697553 + L1 LINE L1 2644 2773 -3373 191 86 0 29 chr17 17741213 17741248 -67697232 + (CATAT)n Simple_repeat Simple_repeat 3 36 0 183 376 172 0 chr17 17741270 17741363 -67697117 + L2 LINE L2 3125 3233 -39 258 256 35 23 chr17 17742743 17742829 -67695651 + MIR SINE MIR 41 127 -81 276 290 129 11 chr17 17742913 17743006 -67695474 + L2 LINE L2 3147 3250 -22 200 278 48 24 chr17 17744353 17744455 -67694025 - MIR SINE MIR -77 131 56 189 324 235 12 chr17 17745171 17745341 -67693139 - MIR SINE MIR -34 228 21 184 122 146 24 chr17 17745423 17745464 -67693016 + L2 LINE L2 3221 3266 -6 216 167 0 0 chr17 17746325 17746373 -67692107 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 314 58 45 chr17 17747268 17747807 -67690673 - SST1 Satellite centromeric -952 611 66 261 0 0 0 chr17 17748572 17748601 -67689879 + (T)n Simple_repeat Simple_repeat 1 29 0 207 184 0 0 chr17 17748796 17748834 -67689646 + (CA)n Simple_repeat Simple_repeat 2 39 0 397 289 56 56 chr17 17749745 17750316 -67688164 - SST1 Satellite centromeric -962 601 31 397 152 0 0 chr17 17750331 17750410 -67688070 + ALR/Alpha Satellite centromeric 9 87 -85 897 200 8 2 chr17 17750496 17752632 -67685848 + ALR/Alpha Satellite centromeric 1 2149 -1 891 211 14 5 chr17 17752647 17753499 -67684981 + ALR/Alpha Satellite centromeric 1 860 -8 969 200 10 3 chr17 17753513 17763176 -67675304 + ALR/Alpha Satellite centromeric 1 9727 0 994 196 8 4 chr17 17763191 17764296 -67674184 + ALR/Alpha Satellite centromeric 1 1101 -11460 2182 112 0 10 chr17 17764296 17764631 -67673849 + AluY SINE Alu 1 332 0 994 196 8 4 chr17 17764631 17769214 -67669266 + ALR/Alpha Satellite centromeric 1101 5667 -6894 1896 149 7 17 chr17 17769214 17769510 -67668970 + AluSx SINE Alu 1 293 -19 994 196 8 4 chr17 17769510 17775659 -67662821 + ALR/Alpha Satellite centromeric 5667 12511 -50 3943 107 47 2 chr17 17775677 17776256 -67662224 - LTR14B LTR ERVK 0 608 4 873 213 0 0 chr17 17776263 17776662 -67661818 + ALR/Alpha Satellite centromeric 1 399 -1 1025 193 5 5 chr17 17776679 17781131 -67657349 + ALR/Alpha Satellite centromeric 1 4451 -29 2056 106 3 14 chr17 17781135 17781417 -67657063 + AluY SINE Alu 6 284 -27 931 192 4 2 chr17 17781558 17784527 -67653953 + ALR/Alpha Satellite centromeric 1 2976 -9 763 152 30 23 chr17 17784628 17784760 -67653720 - FLAM_C SINE Alu 0 133 1 506 86 0 0 chr17 17784765 17784835 -67653645 - Alu SINE Alu -12 299 230 547 284 21 103 chr17 17784914 17785238 -67653242 - L1MEd LINE L1 -4902 1217 868 2218 75 0 14 chr17 17785238 17785518 -67652962 - AluY SINE Alu 0 311 36 2836 202 78 100 chr17 17785518 17786508 -67651972 - LTR5 LTR ERVK 0 969 1 2214 111 7 0 chr17 17786561 17786858 -67651622 - AluSp SINE Alu -13 300 2 2427 93 0 0 chr17 17786871 17787181 -67651299 - AluSx SINE Alu -2 310 1 3095 125 4 47 chr17 17788430 17788704 -67649776 - MER4B LTR ERV1 -30 749 465 2044 124 3 0 chr17 17788704 17789002 -67649478 + AluSx SINE Alu 6 304 -8 3095 125 4 47 chr17 17789002 17789334 -67649146 - MER4B LTR ERV1 -314 465 1 247 167 17 17 chr17 17789681 17789741 -67648739 - FLAM SINE Alu 0 133 74 1938 138 0 0 chr17 17790462 17790775 -67647705 - AluSx SINE Alu 0 313 1 863 269 29 66 chr17 17790778 17790913 -67647567 - L1MC/D LINE L1 -2079 5729 5590 1879 110 28 48 chr17 17790913 17791227 -67647253 - AluSx SINE Alu 0 308 1 863 269 29 66 chr17 17791227 17791467 -67647013 - L1MC/D LINE L1 -2218 5590 5370 2295 70 0 27 chr17 17791467 17791768 -67646712 + AluY SINE Alu 1 293 -18 863 269 29 66 chr17 17791768 17791844 -67646636 - L1MC/D LINE L1 -2438 5370 5293 1580 210 17 3 chr17 17791894 17792194 -67646286 + AluJo SINE Alu 5 308 -4 1188 123 0 6 chr17 17792206 17792368 -67646112 + AluSx SINE Alu 1 161 -151 1562 183 3 34 chr17 17792415 17792710 -67645770 + AluJo SINE Alu 1 286 -26 408 20 0 0 chr17 17792711 17792760 -67645720 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 269 131 34 chr17 17792802 17792977 -67645503 + L1ME4a LINE L1 5743 5934 -187 2088 104 0 63 chr17 17793070 17793241 -67645239 - AluSq SINE Alu -14 299 156 2235 100 3 10 chr17 17793241 17793541 -67644939 - AluSp SINE Alu -15 298 1 2088 104 0 63 chr17 17793541 17793687 -67644793 - AluSq SINE Alu -157 156 2 2171 117 0 16 chr17 17793867 17794176 -67644304 - AluSg SINE Alu -6 304 1 189 0 0 0 chr17 17795256 17795277 -67643203 + (ATG)n Simple_repeat Simple_repeat 2 22 0 1157 133 12 0 chr17 17795277 17795450 -67643030 - AluJb SINE Alu -29 283 109 2061 116 60 0 chr17 17795514 17795798 -67642682 + AluSx SINE Alu 1 301 -11 931 286 46 40 chr17 17795881 17796130 -67642350 + L1MC4a LINE L1 5317 5563 -2245 2196 106 25 43 chr17 17796130 17796478 -67642002 - L1MB3 LINE L1 -7 6176 5823 1648 97 5 0 chr17 17796478 17796694 -67641786 - AluSq SINE Alu -16 297 81 2252 112 0 13 chr17 17796694 17796998 -67641482 - AluSx SINE Alu -11 301 2 2243 87 0 13 chr17 17797002 17797301 -67641179 - AluSc SINE Alu -14 295 1 2196 106 25 43 chr17 17797301 17797344 -67641136 - L1MB3 LINE L1 -362 5821 5786 931 286 46 40 chr17 17797344 17797637 -67640843 + L1MC4a LINE L1 5563 5862 -1946 2214 87 10 10 chr17 17798216 17798514 -67639966 - AluSq SINE Alu -15 298 1 334 123 0 62 chr17 17798531 17798612 -67639868 - AluJ/FRAM SINE Alu 0 302 227 1239 134 13 31 chr17 17798891 17799074 -67639406 - AluJo SINE Alu -8 304 124 303 85 0 0 chr17 17799074 17799121 -67639359 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1239 134 13 31 chr17 17799121 17799161 -67639319 - AluJo SINE Alu -188 124 85 416 39 0 0 chr17 17799161 17799212 -67639268 - AluSg/x SINE Alu -62 250 200 858 117 8 8 chr17 17799217 17799345 -67639135 - FLAM_C SINE Alu -13 130 3 2334 76 0 7 chr17 17799386 17799687 -67638793 + AluY SINE Alu 1 299 -12 2001 100 62 3 chr17 17799687 17799977 -67638503 + AluSx SINE Alu 1 307 -5 978 166 0 0 chr17 17799984 17800141 -67638339 + FRAM SINE Alu 1 152 -24 2033 101 59 7 chr17 17800278 17800565 -67637915 - AluSg SINE Alu -8 302 1 1541 181 46 3 chr17 17800643 17800925 -67637555 + AluSx SINE Alu 1 294 -18 1629 132 77 18 chr17 17800934 17801051 -67637429 + AluSx SINE Alu 1 110 -202 2148 133 3 3 chr17 17801051 17801352 -67637128 + AluSx SINE Alu 1 301 -11 1629 132 77 18 chr17 17801352 17801507 -67636973 + AluSx SINE Alu 110 289 -23 544 152 0 0 chr17 17801508 17801587 -67636893 + AluSg/x SINE Alu 210 288 -22 1099 97 0 7 chr17 17801624 17801769 -67636711 + AluSg SINE Alu 1 144 -166 2042 134 14 0 chr17 17801770 17802062 -67636418 + AluSx SINE Alu 2 297 -15 685 177 15 15 chr17 17802155 17802285 -67636195 + AluJo/FLAM SINE Alu 3 132 -170 1447 114 0 68 chr17 17802287 17802507 -67635973 + AluSx SINE Alu 1 205 -107 456 270 28 24 chr17 17802507 17802718 -67635762 - LTR4 LTR ERV1 0 596 385 496 185 0 0 chr17 17803121 17803202 -67635278 + AluSx SINE Alu 199 279 -30 1845 139 49 0 chr17 17803247 17803558 -67634922 - AluSx SINE Alu 0 312 1 1496 117 5 0 chr17 17803761 17803958 -67634522 + AluSc SINE Alu 1 198 -111 362 224 14 6 chr17 17804085 17804243 -67634237 + MIR SINE MIR 18 261 -1 472 156 0 0 chr17 17804275 17804352 -67634128 + AluSg/x SINE Alu 190 266 -44 1895 174 0 0 chr17 17804366 17804647 -67633833 + AluSx SINE Alu 2 282 -30 2204 113 3 7 chr17 17804666 17804967 -67633513 + AluSp SINE Alu 1 300 -13 392 198 0 12 chr17 17804991 17805077 -67633403 + MER103 DNA DNA 21 105 -61 2401 98 3 0 chr17 17805342 17805648 -67632832 + AluSq SINE Alu 1 307 -6 2248 113 0 0 chr17 17805658 17805958 -67632522 + AluSq SINE Alu 1 300 -13 1071 111 0 0 chr17 17805982 17806126 -67632354 + AluSg/x SINE Alu 163 306 -4 576 184 37 9 chr17 17806781 17806890 -67631590 - AluJ SINE Alu -16 296 185 840 156 0 16 chr17 17806898 17807026 -67631454 - AluJ SINE Alu -186 126 1 785 191 26 42 chr17 17807096 17807285 -67631195 - AluJo SINE Alu -7 305 120 426 201 129 14 chr17 17807315 17807454 -67631026 - MIR SINE MIR -96 166 12 1358 108 0 5 chr17 17807525 17807711 -67630769 - AluSg/x SINE Alu -5 305 121 2109 123 3 0 chr17 17807916 17808201 -67630279 + AluSx SINE Alu 1 286 -26 1077 187 57 5 chr17 17808514 17808723 -67629757 - AluJo SINE Alu -92 220 1 964 161 161 3 chr17 17808723 17809115 -67629365 - MER21B LTR ERV1 -371 492 20 1985 123 30 7 chr17 17809690 17809991 -67628489 + AluSx SINE Alu 1 308 -4 374 241 58 0 chr17 17810387 17810474 -67628006 + FRAM SINE Alu 60 151 -15 1761 116 21 0 chr17 17810489 17810730 -67627750 - AluSc SINE Alu -25 284 39 1878 90 11 19 chr17 17813322 17813588 -67624892 - AluSp SINE Alu -17 296 33 1959 96 32 7 chr17 17813695 17813976 -67624504 + AluSq SINE Alu 2 289 -24 763 182 52 13 chr17 17814072 17814226 -67624254 + FRAM SINE Alu 1 159 -17 2238 125 0 0 chr17 17814673 17814984 -67623496 + AluSx SINE Alu 1 311 -1 716 158 7 43 chr17 17814996 17815135 -67623345 + AluJo SINE Alu 1 134 -178 32 0 0 0 chr17 17815279 17815311 -67623169 + AT_rich Low_complexity Low_complexity 1 32 0 1256 154 0 22 chr17 17815318 17815405 -67623075 + AluJb SINE Alu 1 88 -224 2001 130 7 7 chr17 17815405 17815743 -67622737 + AluSx SINE Alu 1 338 0 1256 154 0 22 chr17 17815743 17815900 -67622580 + AluJb SINE Alu 88 291 -21 1161 187 91 9 chr17 17815916 17816135 -67622345 - AluJo SINE Alu -73 239 3 421 265 103 20 chr17 17816135 17816395 -67622085 - L1MC4a LINE L1 -341 5780 5598 2164 85 10 17 chr17 17816395 17816690 -67621790 - AluSq SINE Alu -20 293 1 421 265 103 20 chr17 17816690 17816718 -67621762 - L1MC4a LINE L1 -523 5598 5574 2236 99 6 6 chr17 17816772 17817084 -67621396 - AluSx SINE Alu 0 312 1 678 188 7 22 chr17 17817120 17817258 -67621222 + AluJo SINE Alu 3 138 -174 2161 111 7 3 chr17 17817265 17817563 -67620917 + AluY SINE Alu 1 299 -12 2228 98 3 0 chr17 17817574 17817860 -67620620 + AluSp SINE Alu 7 293 -20 22 0 0 0 chr17 17817860 17817882 -67620598 + AT_rich Low_complexity Low_complexity 1 22 0 981 160 30 0 chr17 17817882 17818051 -67620429 + AluJo SINE Alu 123 296 -16 1983 134 0 4 chr17 17818114 17818427 -67620053 - AluSg SINE Alu 0 316 5 1946 203 10 0 chr17 17818462 17818867 -67619613 + L1PA15-16 LINE L1 2278 2686 -4163 781 274 30 6 chr17 17818873 17819205 -67619275 + L1PA15-16 LINE L1 3476 3815 -3034 * 4491 227 26 8 chr17 17819183 17820330 -67618150 + L1PA15-16 LINE L1 4465 5632 -1217 472 356 91 9 chr17 17820501 17820720 -67617760 + HAL1 LINE L1 119 355 -2152 360 279 97 47 chr17 17820943 17821345 -67617135 + HAL1 LINE L1 700 1121 -1386 180 188 25 12 chr17 17821413 17821493 -67616987 + (TA)n Simple_repeat Simple_repeat 1 81 0 420 240 62 122 chr17 17821502 17821806 -67616674 - MER93a LTR ERV1 0 402 117 282 235 43 0 chr17 17821952 17822067 -67616413 + (CATATA)n Simple_repeat Simple_repeat 5 124 0 242 193 42 60 chr17 17822071 17822237 -67616243 + (TATAA)n Simple_repeat Simple_repeat 5 167 0 858 277 75 12 chr17 17822290 17822719 -67615761 + HAL1 LINE L1 1323 1778 -729 368 228 35 18 chr17 17822749 17822863 -67615617 + LTR16A LTR ERVL 20 135 -315 1362 203 19 0 chr17 17823099 17823410 -67615070 - L1MA4 LINE L1 -81 6219 5903 21 0 0 0 chr17 17823416 17823437 -67615043 + AT_rich Low_complexity Low_complexity 1 21 0 267 31 0 0 chr17 17824337 17824369 -67614111 + (TG)n Simple_repeat Simple_repeat 2 33 0 28 29 0 0 chr17 17825511 17825546 -67612934 + AT_rich Low_complexity Low_complexity 1 35 0 1214 177 23 0 chr17 17825966 17826231 -67612249 + L1MA6 LINE L1 6030 6300 0 23 33 0 0 chr17 17826872 17826902 -67611578 + AT_rich Low_complexity Low_complexity 1 30 0 1445 259 41 43 chr17 17827412 17828045 -67610435 - L1ME1 LINE L1 -116 6050 5419 3968 178 19 41 chr17 17828045 17828926 -67609554 + L1MA3 LINE L1 5443 6304 -1 30 59 0 0 chr17 17828956 17829007 -67609473 + AT_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr17 17829286 17829324 -67609156 + AT_rich Low_complexity Low_complexity 1 38 0 1307 153 4 0 chr17 17829724 17829952 -67608528 + L1MA3 LINE L1 6077 6305 0 1949 128 7 30 chr17 17830041 17830338 -67608142 + AluSc SINE Alu 1 290 -19 22 35 0 0 chr17 17830707 17830736 -67607744 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr17 17831977 17832013 -67606467 + AT_rich Low_complexity Low_complexity 1 36 0 1227 92 82 0 chr17 17832665 17832849 -67605631 - THE1B LTR MaLR -165 199 1 11494 101 4 5 chr17 17832850 17834431 -67604049 - THE1B-int LTR MaLR -1 1579 1 1927 122 49 35 chr17 17834440 17834784 -67603696 - THE1B LTR MaLR -15 349 1 210 37 0 0 chr17 17834836 17834863 -67603617 + (TG)n Simple_repeat Simple_repeat 1 27 0 2348 90 0 10 chr17 17835091 17835392 -67603088 - AluSp SINE Alu -15 298 1 225 169 85 0 chr17 17835996 17836055 -67602425 + LTR66 LTR ERVL 376 439 -171 33 56 0 0 chr17 17836262 17836316 -67602164 + AT_rich Low_complexity Low_complexity 1 54 0 1838 184 0 0 chr17 17837273 17837572 -67600908 + AluSx SINE Alu 1 299 -13 191 296 93 0 chr17 17838096 17838150 -67600330 + L3b LINE CR1 1278 1336 -247 1053 128 26 0 chr17 17839602 17839758 -67598722 + AluSp SINE Alu 135 294 -19 2413 55 3 0 chr17 17839769 17840062 -67598418 + AluY SINE Alu 1 294 -17 1614 145 65 11 chr17 17840285 17840561 -67597919 + AluSx SINE Alu 14 304 -8 48 67 0 0 chr17 17840811 17840901 -67597579 + AT_rich Low_complexity Low_complexity 1 90 0 1496 248 69 17 chr17 17841700 17842180 -67596300 + MLT1D LTR MaLR 1 505 0 305 278 165 42 chr17 17842193 17842696 -67595784 - L1ME3A LINE L1 -241 5929 5362 476 198 123 14 chr17 18042959 18043168 -67395312 - L1ME3A LINE L1 0 6170 5925 692 289 11 27 chr17 18043191 18043416 -67395064 - L1ME3A LINE L1 -302 5868 5646 455 143 13 0 chr17 18043416 18043493 -67394987 - MER116 DNA Mariner 0 80 3 692 289 11 27 chr17 18043493 18043530 -67394950 - L1ME3A LINE L1 -524 5646 5610 1686 149 4 15 chr17 18046051 18046320 -67392160 + AluJb SINE Alu 1 266 -46 226 292 28 0 chr17 18046622 18046694 -67391786 - MLT1K LTR MaLR -3 585 512 2504 59 0 3 chr17 18047878 18048185 -67390295 - AluY SINE Alu -5 306 1 21 0 0 0 chr17 18048188 18048209 -67390271 + AT_rich Low_complexity Low_complexity 1 21 0 2233 95 0 0 chr17 18050080 18050375 -67388105 - AluY SINE Alu -16 295 1 185 311 14 27 chr17 18050719 18050793 -67387687 - MIR SINE MIR -97 165 93 243 329 40 0 chr17 18051132 18051208 -67387272 - L2 LINE L2 -1 3271 3193 202 320 148 16 chr17 18052014 18052136 -67386344 + MIR3 SINE MIR 15 152 -56 212 286 62 124 chr17 18052657 18052930 -67385550 - L2 LINE L2 -18 3254 2999 251 271 129 0 chr17 18053026 18053096 -67385384 - MIR SINE MIR -81 181 103 293 273 118 35 chr17 18053614 18053800 -67384680 - MIR3 SINE MIR -3 205 2 274 228 114 63 chr17 18054375 18054533 -67383947 - L1ME4a LINE L1 0 6121 5956 188 298 177 32 chr17 18056823 18056981 -67381499 - L3 LINE CR1 -15 1562 1382 187 386 34 0 chr17 18057042 18057130 -67381350 + MIR SINE MIR 60 150 -58 509 230 79 7 chr17 18057203 18057342 -67381138 - L3 LINE CR1 -187 1390 1242 306 356 44 31 chr17 18057457 18057682 -67380798 - L3 LINE CR1 -642 935 708 450 256 142 62 chr17 18058010 18058299 -67380181 + L3b LINE CR1 1116 1427 -156 2233 113 3 0 chr17 18058505 18058815 -67379665 - AluSx SINE Alu -1 311 1 2210 106 0 0 chr17 18059219 18059503 -67378977 + AluSx SINE Alu 1 284 -28 222 37 0 0 chr17 18059508 18059535 -67378945 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2241 100 3 3 chr17 18059536 18059846 -67378634 + AluY SINE Alu 1 310 -1 193 293 35 0 chr17 18060005 18060063 -67378417 - MIR3 SINE MIR -52 156 97 314 338 21 48 chr17 18060456 18060601 -67377879 + L1MC4 LINE L1 7898 8038 -4 231 295 47 47 chr17 18060601 18060730 -67377750 - L2 LINE L2 -233 3039 2911 2034 147 0 3 chr17 18062095 18062402 -67376078 - AluSx SINE Alu -6 306 1 2269 69 0 3 chr17 18062411 18062701 -67375779 - AluY SINE Alu -22 289 1 191 304 18 0 chr17 18062778 18062834 -67375646 - L2 LINE L2 -79 3193 3137 563 319 18 33 chr17 18063687 18063960 -67374520 + L1ME LINE L1 5532 5800 -321 214 394 38 8 chr17 18065510 18065642 -67372838 - MIR3 SINE MIR -63 145 10 2246 96 10 0 chr17 18067748 18068051 -67370429 + AluSx SINE Alu 1 306 -6 1946 90 26 8 chr17 18068135 18068403 -67370077 + AluSx SINE Alu 25 297 -15 404 259 211 24 chr17 18068415 18068581 -67369899 + MER117 DNA MER1_type 1 197 0 2031 126 0 0 chr17 18068996 18069281 -67369199 + AluSx SINE Alu 19 303 -9 2453 57 0 0 chr17 18069281 18069577 -67368903 + AluY SINE Alu 1 297 -14 1918 152 0 10 chr17 18069621 18069931 -67368549 + AluJo SINE Alu 1 307 -5 1612 163 75 14 chr17 18069943 18070225 -67368255 + AluJb SINE Alu 3 301 -1 194 362 124 37 chr17 18070364 18070582 -67367898 + L2 LINE L2 3077 3313 0 203 302 0 47 chr17 18071970 18072056 -67366424 - MIR SINE MIR -93 115 34 230 349 36 46 chr17 18072466 18072661 -67365819 - MIR SINE MIR -60 202 10 2039 128 0 0 chr17 18073901 18074190 -67364290 - AluSx SINE Alu -23 289 1 2138 107 7 0 chr17 18074414 18074714 -67363766 + AluSp SINE Alu 1 302 -11 1953 98 59 18 chr17 18074790 18074908 -67363572 + AluSg1 SINE Alu 1 113 -196 2266 107 0 0 chr17 18074908 18075206 -67363274 + AluSc SINE Alu 1 298 -11 1953 98 59 18 chr17 18075206 18075373 -67363107 + AluSg1 SINE Alu 113 298 -11 619 168 0 20 chr17 18075373 18075474 -67363006 + FLAM_A SINE Alu 24 122 -20 2291 104 0 0 chr17 18076536 18076834 -67361646 + AluSc SINE Alu 1 298 -11 1927 141 0 30 chr17 18078956 18079292 -67359188 + AluSx SINE Alu 1 327 0 327 356 13 10 chr17 18079299 18079434 -67359046 - MIR3 SINE MIR -5 203 63 237 200 108 0 chr17 18079871 18079936 -67358544 - MIR3 SINE MIR -23 185 114 244 264 73 36 chr17 18080022 18080132 -67358348 - MIR SINE MIR -74 134 21 2328 90 3 0 chr17 18080896 18081206 -67357274 - AluSp SINE Alu -2 311 1 219 103 0 0 chr17 18083271 18083310 -67355170 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 359 309 40 27 chr17 18083987 18084136 -67354344 - MIR3 SINE MIR -55 153 3 248 349 89 12 chr17 18085063 18085278 -67353202 - MIR SINE MIR -20 242 9 917 146 0 7 chr17 18090302 18090453 -67348027 - L1MB8 LINE L1 0 6178 6029 274 248 62 54 chr17 18090740 18090884 -67347596 - MIR3 SINE MIR -35 173 25 193 281 157 0 chr17 18091393 18091482 -67346998 - L2 LINE L2 -21 3251 3149 199 308 15 0 chr17 18091939 18092004 -67346476 + MIR SINE MIR 78 143 -119 24 0 0 0 chr17 18093133 18093157 -67345323 + GC_rich Low_complexity Low_complexity 1 24 0 480 241 120 44 chr17 18093276 18093434 -67345046 + MIR SINE MIR 80 249 -13 1946 151 0 0 chr17 18093924 18094246 -67344234 + AluSx SINE Alu 1 322 0 2007 115 11 4 chr17 18094251 18094562 -67343918 + AluSx SINE Alu 1 313 0 291 276 58 0 chr17 18094637 18094724 -67343756 - MIR SINE MIR -113 149 58 257 125 0 0 chr17 18095291 18095331 -67343149 - L3 LINE CR1 -112 1465 1426 264 264 81 26 chr17 18095830 18095988 -67342492 - MIR SINE MIR -63 145 19 186 269 0 0 chr17 18096072 18096124 -67342356 - MIR SINE MIR -76 132 81 195 289 201 29 chr17 18097388 18097627 -67340853 - L2 LINE L2 -225 3088 2809 239 333 91 15 chr17 18098231 18098363 -67340117 + MIR3 SINE MIR 3 144 -64 207 0 0 0 chr17 18098432 18098455 -67340025 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2003 69 0 0 chr17 18098457 18098704 -67339776 - AluY SINE Alu -64 247 1 278 256 50 16 chr17 18098962 18099047 -67339433 - L1ME4a LINE L1 0 6121 6029 1665 168 18 3 chr17 18099047 18099333 -67339147 + AluJo SINE Alu 1 290 -22 278 256 50 16 chr17 18099333 18099368 -67339112 - L1ME4a LINE L1 -92 6029 5997 189 0 0 0 chr17 18099388 18099409 -67339071 + (TC)n Simple_repeat Simple_repeat 2 22 0 1786 124 50 7 chr17 18099454 18099736 -67338744 - AluSx SINE Alu -18 294 1 472 286 84 5 chr17 18099745 18099948 -67338532 - L1MB7 LINE L1 0 6184 5966 228 135 0 0 chr17 18099949 18099986 -67338494 + (TA)n Simple_repeat Simple_repeat 2 38 0 2423 62 10 3 chr17 18099986 18100295 -67338185 - AluY SINE Alu 0 311 1 350 390 16 37 chr17 18100399 18100486 -67337994 - L1MB7 LINE L1 -347 5774 5687 2490 64 0 3 chr17 18100486 18100798 -67337682 - AluY SINE Alu 0 311 1 350 390 16 37 chr17 18100798 18100897 -67337583 - L1MB7 LINE L1 -434 5687 5592 681 251 142 5 chr17 18101121 18101332 -67337148 - MIR SINE MIR -10 252 13 368 280 166 6 chr17 18102936 18103093 -67335387 + MIR SINE MIR 81 262 0 728 184 7 29 chr17 18103109 18103245 -67335235 + FLAM_C SINE Alu 1 133 -10 218 241 17 52 chr17 18103249 18103307 -67335173 + MIR SINE MIR 199 254 -8 1860 131 37 20 chr17 18103499 18103796 -67334684 + AluJo SINE Alu 2 303 -9 300 288 0 0 chr17 18104134 18104200 -67334280 + L1MC4 LINE L1 6638 6703 -1339 261 0 0 0 chr17 18104202 18104231 -67334249 + (TA)n Simple_repeat Simple_repeat 1 29 0 2162 106 0 0 chr17 18104231 18104513 -67333967 - AluSc SINE Alu -15 294 13 1624 200 7 0 chr17 18104514 18104804 -67333676 - AluJo SINE Alu -20 292 1 209 304 160 28 chr17 18105130 18105311 -67333169 - L2 LINE L2 -238 3034 2830 267 283 75 19 chr17 18105658 18105764 -67332716 + MIR SINE MIR 20 131 -131 356 225 196 0 chr17 18106257 18106430 -67332050 + L2 LINE L2 2867 3073 -240 188 222 0 0 chr17 18106432 18106468 -67332012 + L2 LINE L2 3262 3297 -16 255 196 18 0 chr17 18107070 18107126 -67331354 + MER96 DNA MER1_type? 119 175 0 241 321 89 18 chr17 18107163 18107275 -67331205 - L3 LINE CR1 -96 1481 1362 2251 84 3 29 chr17 18107527 18107838 -67330642 + AluSx SINE Alu 6 308 -4 1630 109 26 0 chr17 18109103 18109332 -67329148 - AluSg SINE Alu -75 235 1 205 333 163 41 chr17 18109332 18109455 -67329025 + MER5B DNA MER1_type 41 178 0 2139 123 0 7 chr17 18110682 18110984 -67327496 - AluSx SINE Alu 0 312 13 2191 111 0 7 chr17 18110999 18111305 -67327175 - AluSq SINE Alu -9 304 1 615 271 122 18 chr17 18112154 18112526 -67325954 - L1MC4a LINE L1 -104 6017 5624 252 339 77 15 chr17 18112875 18113005 -67325475 + MIR3 SINE MIR 4 141 -67 2339 90 0 0 chr17 18113010 18113311 -67325169 + AluSg SINE Alu 1 301 -9 500 318 46 15 chr17 18113313 18113508 -67324972 - MIR SINE MIR -5 257 57 346 298 106 14 chr17 18115347 18115488 -67322992 + MIR SINE MIR 89 242 -20 254 308 62 72 chr17 18115602 18115797 -67322683 + MIR SINE MIR 66 258 -4 552 316 68 46 chr17 18116175 18116232 -67322248 - MIR SINE MIR 0 262 208 465 66 0 0 chr17 18116238 18116299 -67322181 + (TATG)n Simple_repeat Simple_repeat 4 64 0 2042 134 3 0 chr17 18116299 18116584 -67321896 - AluSx SINE Alu -23 289 1 552 316 68 46 chr17 18116584 18116763 -67321717 - MIR SINE MIR -54 208 21 426 263 29 64 chr17 18117948 18118119 -67320361 - L2 LINE L2 -208 3064 2900 1230 197 78 7 chr17 18118120 18118568 -67319912 - MLT1F1 LTR MaLR 0 567 3 185 353 133 0 chr17 18118616 18118766 -67319714 - L2 LINE L2 -454 2860 2691 243 319 17 42 chr17 18119039 18119158 -67319322 - MIR3 SINE MIR -53 155 40 199 307 80 23 chr17 18119358 18119446 -67319034 - MIR SINE MIR -122 140 48 245 291 154 43 chr17 18119578 18119695 -67318785 + MIR SINE MIR 17 146 -62 424 335 51 6 chr17 18119714 18119890 -67318590 + MIR SINE MIR 3 186 -76 309 51 0 0 chr17 18120618 18120657 -67317823 + (TG)n Simple_repeat Simple_repeat 1 39 0 245 289 133 0 chr17 18120775 18120865 -67317615 + L2 LINE L2 3171 3272 0 219 339 73 0 chr17 18120919 18121028 -67317452 + MIR SINE MIR 3 119 -143 379 356 49 49 chr17 18122978 18123326 -67315154 - L2 LINE L2 -49 3264 2917 211 322 56 7 chr17 18123560 18123703 -67314777 + (CCCCAG)n Simple_repeat Simple_repeat 5 154 0 232 279 257 7 chr17 18124161 18124297 -67314183 - MIR3 SINE MIR -18 190 21 197 266 78 0 chr17 18127819 18127883 -67310597 + MIR3 SINE MIR 109 177 -31 618 163 62 47 chr17 18128623 18128752 -67309728 + FLAM_C SINE Alu 1 131 -2 250 85 21 21 chr17 18130608 18130655 -67307825 + (TA)n Simple_repeat Simple_repeat 2 48 0 265 344 45 40 chr17 18133657 18133881 -67304599 + L2 LINE L2 3086 3310 -3 286 274 74 21 chr17 18133917 18134012 -67304468 + MIR SINE MIR 107 206 -56 1833 147 4 0 chr17 18134026 18134298 -67304182 + AluJb SINE Alu 9 281 -31 746 9 60 26 chr17 18134301 18134417 -67304063 + (TAAAA)n Simple_repeat Simple_repeat 5 124 0 775 271 147 0 chr17 18135857 18136130 -67302350 + MLT1H LTR MaLR 39 351 -198 258 268 0 0 chr17 18136533 18136589 -67301891 + L2 LINE L2 3004 3059 -213 419 310 26 0 chr17 18137474 18137587 -67300893 - MIR SINE MIR -65 197 82 2208 93 0 0 chr17 18137604 18137932 -67300548 + AluSc SINE Alu 1 309 0 869 206 7 0 chr17 18137947 18138102 -67300378 + AluJb SINE Alu 142 297 -15 183 377 0 0 chr17 18138211 18138272 -67300208 + MIR SINE MIR 89 149 -113 212 265 20 0 chr17 18138312 18138361 -67300119 + L2 LINE L2 3264 3313 0 1678 139 45 14 chr17 18139079 18139392 -67299088 + AluJb SINE Alu 1 312 0 2129 124 0 7 chr17 18139656 18139963 -67298517 - AluSx SINE Alu -7 305 1 2432 63 0 0 chr17 18139970 18140270 -67298210 - AluY SINE Alu -11 300 1 238 207 52 17 chr17 18140283 18140341 -67298139 - MIR SINE MIR -86 176 117 321 261 254 0 chr17 18140811 18140941 -67297539 - MIR SINE MIR -24 238 76 196 261 87 0 chr17 18141314 18141383 -67297097 - MIR SINE MIR -85 177 103 226 323 43 0 chr17 18141843 18141922 -67296558 - MIR SINE MIR -104 104 31 187 321 76 30 chr17 18142337 18142574 -67295906 - L2 LINE L2 -1460 1854 1607 214 162 0 0 chr17 18142574 18142611 -67295869 + GA-rich Low_complexity Low_complexity 1 37 0 218 356 48 0 chr17 18143484 18143588 -67294892 - MIR SINE MIR -74 188 80 369 0 0 0 chr17 18148948 18148989 -67289491 + (CTG)n Simple_repeat Simple_repeat 1 41 0 268 80 0 40 chr17 18149849 18149899 -67288581 + (GGGA)n Simple_repeat Simple_repeat 4 51 0 22 0 0 0 chr17 18150172 18150194 -67288286 + GC_rich Low_complexity Low_complexity 1 22 0 297 128 0 0 chr17 18150420 18150467 -67288013 + (CA)n Simple_repeat Simple_repeat 1 47 0 276 295 0 27 chr17 18151264 18151376 -67287104 + GA-rich Low_complexity Low_complexity 3 111 0 219 69 0 0 chr17 18152664 18152693 -67285787 + (GGCTG)n Simple_repeat Simple_repeat 3 31 0 257 224 17 0 chr17 18153990 18154048 -67284432 + GA-rich Low_complexity Low_complexity 6 64 0 1746 84 133 0 chr17 18155697 18155975 -67282505 - AluSp SINE Alu 0 311 1 201 191 21 21 chr17 18156105 18156152 -67282328 + MIR SINE MIR 67 113 -95 * 408 261 235 41 chr17 18156141 18156409 -67282071 + L2 LINE L2 2946 3265 -48 288 243 21 111 chr17 18156581 18156816 -67281664 - Charlie8 DNA MER1_type -2138 279 66 290 322 107 8 chr17 18157279 18157400 -67281080 + L2 LINE L2 3180 3312 -1 224 261 57 89 chr17 18158192 18158349 -67280131 - MIR3 SINE MIR -29 179 28 207 254 0 0 chr17 18158731 18158794 -67279686 + GA-rich Low_complexity Low_complexity 1 63 0 24 0 0 0 chr17 18160279 18160303 -67278177 + GC_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 18160577 18160605 -67277875 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr17 18160791 18160815 -67277665 + GC_rich Low_complexity Low_complexity 1 24 0 208 300 40 20 chr17 18162099 18162199 -67276281 - MIR SINE MIR -60 148 88 2097 113 3 3 chr17 18162392 18162683 -67275797 + AluSq SINE Alu 1 291 -22 2267 66 7 10 chr17 18162685 18162986 -67275494 + AluY SINE Alu 3 302 -9 474 284 111 24 chr17 18164187 18164395 -67274085 + MIR SINE MIR 29 254 -8 220 322 44 0 chr17 18164621 18164711 -67273769 - MER5A DNA MER1_type -80 109 16 240 220 44 99 chr17 18164954 18165045 -67273435 + MIR3 SINE MIR 81 166 -42 406 297 174 0 chr17 18165224 18165379 -67273101 - MIR SINE MIR -31 231 50 315 318 16 16 chr17 18165454 18165580 -67272900 + L1MC4a LINE L1 5495 5620 -2188 237 263 140 64 chr17 18165592 18165793 -67272687 + L1MC4a LINE L1 5680 5864 -1944 1825 148 20 3 chr17 18165793 18166097 -67272383 + AluJo SINE Alu 1 309 -3 1824 134 54 0 chr17 18166100 18166377 -67272103 + AluSx SINE Alu 1 292 -20 237 263 140 64 chr17 18166377 18166407 -67272073 + L1MC4a LINE L1 5865 5933 -1875 279 265 145 16 chr17 18166470 18166594 -67271886 + MIR SINE MIR 7 145 -63 218 163 47 0 chr17 18166660 18166703 -67271777 - MIR SINE MIR -60 148 104 1364 125 125 18 chr17 18166950 18167231 -67271249 + Tigger2 DNA MER2_type 2270 2580 -138 1616 187 4 0 chr17 18167253 18167521 -67270959 + AluJb SINE Alu 1 269 -43 453 315 13 34 chr17 18168167 18168316 -67270164 + MIR SINE MIR 67 212 -50 402 199 0 0 chr17 18168384 18168474 -67270006 - MIR SINE MIR -52 156 66 35 24 0 0 chr17 18168538 18168580 -67269900 + AT_rich Low_complexity Low_complexity 1 42 0 207 356 123 14 chr17 18168888 18169034 -67269446 - MIR SINE MIR -74 188 27 538 193 21 0 chr17 18169343 18169488 -67268992 + (TCCA)n Simple_repeat Simple_repeat 1 148 0 283 328 34 0 chr17 18169488 18169607 -67268873 + (CCCA)n Simple_repeat Simple_repeat 1 123 0 315 330 166 27 chr17 18169607 18170320 -67268160 - L2 LINE L2 0 3272 2425 234 0 0 0 chr17 18171204 18171230 -67267250 + (TGGA)n Simple_repeat Simple_repeat 3 28 0 729 250 17 11 chr17 18174096 18174272 -67264208 - MER45A DNA AcHobo -1 177 1 185 360 40 30 chr17 18174305 18174405 -67264075 - MIR SINE MIR -21 241 141 294 317 248 6 chr17 18174423 18174584 -67263896 - MIR SINE MIR -14 248 49 315 309 8 57 chr17 18174859 18175102 -67263378 + L1ME4a LINE L1 5824 6093 -28 638 122 143 0 chr17 18177348 18177446 -67261034 - FLAM_C SINE Alu -22 121 10 434 228 81 0 chr17 18177462 18177585 -67260895 + L1ME3A LINE L1 5734 5866 -304 870 117 70 0 chr17 18177599 18177727 -67260753 + AluSq/x SINE Alu 1 137 -175 1866 152 30 0 chr17 18177730 18178027 -67260453 + AluSx SINE Alu 6 311 -1 620 202 84 17 chr17 18178076 18178254 -67260226 + L1ME3A LINE L1 5981 6170 0 203 300 43 0 chr17 18178255 18178325 -67260155 + L2 LINE L2 2701 2773 -541 368 343 122 0 chr17 18178439 18178710 -67259770 + MLT1I LTR MaLR 98 401 -8 245 276 79 0 chr17 18179898 18179974 -67258506 - MIR SINE MIR -86 122 41 550 277 171 28 chr17 18180068 18180389 -67258091 + L2 LINE L2 2827 3193 -79 195 314 149 35 chr17 18180842 18181103 -67257377 + L2 LINE L2 2966 3256 -16 832 247 31 26 chr17 18181248 18181475 -67257005 - MIR SINE MIR -3 259 32 214 343 112 15 chr17 18182324 18182458 -67256022 + L2 LINE L2 3126 3272 0 269 328 16 49 chr17 18182673 18182795 -67255685 - L2 LINE L2 -5 3308 3191 339 293 143 62 chr17 18182846 18183105 -67255375 + L1ME4a LINE L1 5834 6113 -8 188 333 0 0 chr17 18183377 18183434 -67255046 + MIR SINE MIR 91 147 -61 * 271 362 162 10 chr17 18183411 18183912 -67254568 + L2 LINE L2 2669 3251 -21 207 279 0 49 chr17 18184510 18184571 -67253909 - MIR3 SINE MIR -52 156 99 359 304 67 7 chr17 18185711 18185846 -67252634 + L2 LINE L2 3162 3304 -9 2181 94 7 0 chr17 18185997 18186294 -67252186 + AluSp SINE Alu 2 300 -13 193 273 50 93 chr17 18187270 18187431 -67251049 - L2 LINE L2 -89 3183 3030 224 254 0 16 chr17 18187554 18187617 -67250863 + MIR SINE MIR 96 157 -105 1761 111 26 102 chr17 18187956 18188300 -67250180 + AluYb8 SINE Alu 1 318 0 237 274 0 0 chr17 18188395 18188446 -67250034 - MER91A DNA MER1_type -144 52 2 244 320 72 61 chr17 18188739 18188920 -67249560 + MER5A DNA MER1_type 7 189 0 194 175 25 0 chr17 18189535 18189575 -67248905 - L2 LINE L2 -7 3265 3225 22 0 0 0 chr17 18190036 18190058 -67248422 + GC_rich Low_complexity Low_complexity 1 22 0 206 155 14 84 chr17 18190091 18190162 -67248318 + (CCCCG)n Simple_repeat Simple_repeat 2 67 0 24 0 0 0 chr17 18190272 18190296 -67248184 + GC_rich Low_complexity Low_complexity 1 24 0 666 272 72 96 chr17 18190435 18190894 -67247586 - L2 LINE L2 0 3313 2866 383 220 101 9 chr17 18191154 18191263 -67247217 + L2 LINE L2 2926 3044 -228 2026 72 118 0 chr17 18191773 18192052 -67246428 - AluSp SINE Alu -1 312 1 564 227 45 0 chr17 18192277 18192409 -67246071 + MLT1J2 LTR MaLR 24 161 -289 430 280 6 64 chr17 18192603 18192760 -67245720 - L2 LINE L2 0 3313 3166 201 298 35 26 chr17 18192804 18192918 -67245562 - L2 LINE L2 -337 2977 2863 223 252 23 28 chr17 18192926 18193039 -67245441 + MIR SINE MIR 101 211 -51 328 348 32 19 chr17 18193890 18194048 -67244432 + MIR SINE MIR 91 250 -12 229 219 0 208 chr17 18194098 18194290 -67244190 + L2 LINE L2 3028 3179 -93 432 133 48 12 chr17 18194352 18194435 -67244045 + THE1A LTR MaLR 194 279 -76 * 1755 150 7 4 chr17 18194435 18194709 -67243771 - AluJb SINE Alu -37 275 1 691 135 183 29 chr17 18194709 18194908 -67243572 + LTR8A LTR ERV1 349 583 -144 2501 70 3 0 chr17 18195557 18195869 -67242611 + AluSp SINE Alu 1 313 0 249 264 134 73 chr17 18196618 18196795 -67241685 + L2 LINE L2 2545 2710 -604 1577 99 149 11 chr17 18196795 18197057 -67241423 + AluSg1 SINE Alu 1 298 -11 228 35 0 0 chr17 18197057 18197086 -67241394 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 264 134 73 chr17 18197086 18197153 -67241327 + L2 LINE L2 2709 2805 -509 2413 70 3 13 chr17 18197672 18197985 -67240495 - AluSg SINE Alu 0 310 1 202 346 20 20 chr17 18198701 18198802 -67239678 - MER5A DNA MER1_type -42 147 47 1589 171 0 4 chr17 18199235 18199498 -67238982 + AluJb SINE Alu 34 295 -17 462 65 0 0 chr17 18200014 18200076 -67238404 + (TTCA)n Simple_repeat Simple_repeat 1 62 0 212 209 0 0 chr17 18200138 18200181 -67238299 - L2 LINE L2 -1 3312 3270 257 228 0 0 chr17 18250230 18250287 -67188193 - L2 LINE L2 -215 3057 3001 2019 141 16 10 chr17 18250681 18250807 -67187673 + AluJb SINE Alu 2 126 -231 225 0 0 0 chr17 18250807 18250832 -67187648 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2019 141 16 10 chr17 18250832 18251059 -67187421 + AluJb SINE Alu 126 357 0 420 20 0 0 chr17 18251158 18251207 -67187273 + (CA)n Simple_repeat Simple_repeat 2 50 0 301 240 70 20 chr17 18251484 18251584 -67186896 - MIR3 SINE MIR -46 162 58 227 247 51 4 chr17 18251748 18251816 -67186664 - MIR SINE MIR -47 161 92 196 310 87 43 chr17 18251875 18252048 -67186432 + MIR SINE MIR 30 211 -51 1397 165 0 119 chr17 18252326 18252653 -67185827 - AluSc SINE Alu -21 288 1 1787 212 7 30 chr17 18252968 18253008 -67185472 + MSTD LTR MaLR 1 40 -356 2042 163 0 0 chr17 18253008 18253321 -67185159 - AluSq SINE Alu 0 313 1 1787 212 7 30 chr17 18253321 18253685 -67184795 + MSTD LTR MaLR 40 396 0 576 272 73 27 chr17 18254231 18254535 -67183945 + MLT1K LTR MaLR 1 511 0 663 222 101 5 chr17 18254603 18254792 -67183688 + MLT1K LTR MaLR 374 580 -8 444 274 133 33 chr17 18254812 18255053 -67183427 + L3 LINE CR1 1209 1473 -104 250 267 12 47 chr17 18255657 18255743 -67182737 + MIR SINE MIR 180 262 0 501 303 48 68 chr17 18256022 18256359 -67182121 + L2 LINE L2 2870 3199 -73 292 284 29 0 chr17 18256398 18256500 -67181980 - MIR SINE MIR -42 220 116 747 207 67 31 chr17 18256505 18256898 -67181582 - MLT1D LTR MaLR 0 505 19 181 233 0 0 chr17 18256924 18256967 -67181513 - MIR SINE MIR -188 74 32 223 306 126 0 chr17 18257352 18257463 -67181017 - MIR SINE MIR -21 241 117 279 264 0 0 chr17 18257834 18257963 -67180517 + G-rich Low_complexity Low_complexity 4 132 0 225 154 0 0 chr17 18258619 18258658 -67179822 + (TG)n Simple_repeat Simple_repeat 1 39 0 618 265 225 14 chr17 18258745 18259468 -67179012 - L2 LINE L2 0 3313 2434 285 340 51 6 chr17 18260191 18260347 -67178133 + MIR SINE MIR 20 182 -80 1019 257 74 43 chr17 18260697 18261184 -67177296 + MLT1D LTR MaLR 3 504 -1 2387 97 3 6 chr17 18261589 18261900 -67176580 - AluSx SINE Alu -2 310 1 333 247 0 0 chr17 18262181 18262262 -67176218 - MER3 DNA MER1_type 0 209 129 189 0 0 0 chr17 18262262 18262283 -67176197 + (TG)n Simple_repeat Simple_repeat 2 22 0 2103 116 0 4 chr17 18262291 18262566 -67175914 - AluSg SINE Alu -36 274 1 202 243 68 27 chr17 18262716 18262790 -67175690 - MIR SINE MIR -58 150 74 311 350 56 12 chr17 18262990 18263150 -67175330 + MIR SINE MIR 88 254 -8 337 248 161 15 chr17 18263301 18263438 -67175042 + MLT1K LTR MaLR 321 477 -111 295 316 103 26 chr17 18263495 18263612 -67174868 - L3 LINE CR1 -39 1538 1413 429 289 0 39 chr17 18263741 18263944 -67174536 + MIR SINE MIR 40 233 -29 222 225 31 39 chr17 18264292 18264421 -67174059 + (TG)n Simple_repeat Simple_repeat 2 129 0 185 226 172 11 chr17 18264485 18264578 -67173902 + MIR SINE MIR 45 152 -56 466 262 200 23 chr17 18264639 18265024 -67173456 - L2 LINE L2 -6 3307 2855 1135 258 5 15 chr17 18265074 18265170 -67173310 + L1ME1 LINE L1 5728 5823 -343 2347 95 7 0 chr17 18265170 18265466 -67173014 + AluSp SINE Alu 1 298 -15 1135 258 5 15 chr17 18265466 18265759 -67172721 + L1ME1 LINE L1 5823 6159 -7 2414 101 0 9 chr17 18265940 18266256 -67172224 - AluSq SINE Alu 0 313 1 306 180 0 0 chr17 18266380 18266441 -67172039 + (TG)n Simple_repeat Simple_repeat 1 61 0 649 259 82 27 chr17 18266513 18266807 -67171673 + MLT1I LTR MaLR 35 344 -65 5674 151 43 18 chr17 18266822 18267149 -67171331 - L1MC1 LINE L1 0 6333 6016 2314 108 3 3 chr17 18267149 18267454 -67171026 - AluSg SINE Alu -5 305 1 5674 151 43 18 chr17 18267454 18267851 -67170629 - L1MC1 LINE L1 -317 6016 5630 1386 181 23 85 chr17 18267851 18268250 -67170230 - MLT1A2 LTR MaLR 0 374 1 5674 151 43 18 chr17 18268250 18268498 -67169982 - L1MC1 LINE L1 -703 5630 5390 690 198 0 0 chr17 18268498 18268624 -67169856 - FLAM_A SINE Alu -4 129 4 5674 151 43 18 chr17 18268624 18268875 -67169605 - L1MC1 LINE L1 -943 5390 5082 1815 154 0 11 chr17 18268898 18269177 -67169303 - AluJo SINE Alu -24 288 13 1871 124 44 7 chr17 18269213 18269486 -67168994 + AluSx SINE Alu 1 283 -29 250 302 35 0 chr17 18269596 18269682 -67168798 - LTR67 LTR ERVL -373 184 96 340 164 148 82 chr17 18269985 18270107 -67168373 + MLT1C LTR MaLR 1 130 -337 691 117 28 151 chr17 18270111 18270290 -67168190 + FRAM SINE Alu 20 176 0 631 213 63 31 chr17 18270295 18270545 -67167935 + MLT1C LTR MaLR 171 467 0 416 159 0 0 chr17 18270554 18270623 -67167857 + MSTB LTR MaLR 1 69 -357 2019 159 0 3 chr17 18270623 18270924 -67167556 + AluJo SINE Alu 1 300 -12 195 69 0 0 chr17 18271095 18271124 -67167356 + (TA)n Simple_repeat Simple_repeat 1 29 0 2494 46 0 0 chr17 18271126 18271433 -67167047 - AluY SINE Alu 0 307 1 180 0 0 0 chr17 18271447 18271467 -67167013 + (CA)n Simple_repeat Simple_repeat 2 21 0 189 0 0 0 chr17 18271467 18271488 -67166992 + (TG)n Simple_repeat Simple_repeat 1 21 0 802 191 31 13 chr17 18271500 18271766 -67166714 + MSTB LTR MaLR 55 362 -64 200 94 0 31 chr17 18271766 18271798 -67166682 + (TCCC)n Simple_repeat Simple_repeat 1 31 0 752 121 13 25 chr17 18271798 18271955 -67166525 + (TTTC)n Simple_repeat Simple_repeat 4 158 0 2259 83 4 0 chr17 18271955 18272231 -67166249 - AluSp SINE Alu -36 277 1 461 72 14 0 chr17 18272231 18272300 -67166180 + MSTB LTR MaLR 363 432 0 8163 174 7 25 chr17 18272302 18272667 -67165813 + MSTB-int LTR MaLR 5 375 -1276 2043 152 10 0 chr17 18272667 18272970 -67165510 - AluJb SINE Alu -6 306 1 8163 174 7 25 chr17 18272970 18273294 -67165186 + MSTB-int LTR MaLR 375 704 -947 2226 109 0 0 chr17 18273294 18273587 -67164893 + AluSx SINE Alu 20 312 0 8163 174 7 25 chr17 18273587 18274389 -67164091 + MSTB-int LTR MaLR 704 1469 -182 336 176 0 0 chr17 18274389 18274440 -67164040 - Alu SINE Alu -248 51 1 1320 148 43 4 chr17 18274443 18274673 -67163807 + MSTB1 LTR MaLR 179 417 -15 310 335 0 66 chr17 18274817 18274869 -67163611 + LTR16B LTR ERVL 323 377 -87 2396 94 10 3 chr17 18274869 18275177 -67163303 - AluSq SINE Alu -3 310 1 310 335 0 66 chr17 18275177 18275276 -67163204 + LTR16B LTR ERVL 377 464 0 2192 249 86 66 chr17 18275276 18275404 -67163076 - HAL1 LINE L1 -345 2162 2038 252 0 0 0 chr17 18275404 18275432 -67163048 + (GTTTG)n Simple_repeat Simple_repeat 3 30 0 2192 249 86 66 chr17 18275432 18275866 -67162614 - HAL1 LINE L1 -469 2038 1614 1958 144 20 34 chr17 18275866 18275899 -67162581 - MER7A DNA MER2_type -2692 346 314 2821 10 0 0 chr17 18275899 18276218 -67162262 + AluY SINE Alu 1 319 0 1958 144 20 34 chr17 18276218 18276536 -67161944 - MER7A DNA MER2_type -2724 314 1 2192 249 86 66 chr17 18276536 18276847 -67161633 - HAL1 LINE L1 -893 1614 1311 2505 81 0 3 chr17 18276847 18277154 -67161326 - AluY SINE Alu -5 306 1 2192 249 86 66 chr17 18277154 18277288 -67161192 - HAL1 LINE L1 -1196 1311 1129 2222 131 10 0 chr17 18277288 18277594 -67160886 - AluSg SINE Alu -1 309 1 2192 249 86 66 chr17 18277594 18277637 -67160843 - HAL1 LINE L1 -1378 1129 1088 37 52 0 0 chr17 18277691 18277749 -67160731 + AT_rich Low_complexity Low_complexity 1 58 0 478 167 37 9 chr17 18277754 18277862 -67160618 - HAL1 LINE L1 -1433 1074 964 1584 173 0 64 chr17 18277879 18278191 -67160289 - AluJo SINE Alu -20 292 1 2217 128 0 0 chr17 18278301 18278606 -67159874 + AluSq SINE Alu 1 305 -8 303 222 69 0 chr17 18278612 18278684 -67159796 - HAL1 LINE L1 -1581 926 850 1888 204 19 0 chr17 18278731 18279108 -67159372 - MLT1B LTR MaLR -6 384 1 208 325 34 45 chr17 18279118 18279386 -67159094 + L2 LINE L2 1831 2095 -1219 1968 165 0 0 chr17 18279517 18279808 -67158672 + AluJb SINE Alu 5 295 -17 326 290 0 10 chr17 18279810 18279910 -67158570 + MER5A DNA MER1_type 63 161 -28 841 278 48 0 chr17 18279937 18280164 -67158316 - MIR SINE MIR 0 262 25 238 302 19 38 chr17 18280535 18280694 -67157786 + C-rich Low_complexity Low_complexity 6 161 0 2297 85 16 31 chr17 18281030 18281347 -67157133 - AluSx SINE Alu 0 312 1 2822 174 82 62 chr17 18281358 18281685 -67156795 - L1MB5 LINE L1 0 6174 5855 2344 90 3 10 chr17 18281685 18281986 -67156494 - AluSq SINE Alu -14 299 1 2822 174 82 62 chr17 18281986 18282011 -67156469 - L1MB5 LINE L1 -319 5855 5832 2072 123 3 7 chr17 18282011 18282326 -67156154 + AluSq SINE Alu 1 313 0 2822 174 82 62 chr17 18282326 18282700 -67155780 - L1MB5 LINE L1 -342 5832 5432 196 364 0 0 chr17 18282702 18282768 -67155712 + L2 LINE L2 2989 3054 -218 254 228 130 0 chr17 18283285 18283377 -67155103 + MIR SINE MIR 37 140 -68 1367 172 17 92 chr17 18283416 18283765 -67154715 - MLT1B LTR MaLR 0 390 68 1137 185 64 54 chr17 18283777 18283987 -67154493 - MER2 DNA MER2_type -28 317 111 207 0 0 0 chr17 18283987 18284010 -67154470 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2242 108 0 0 chr17 18284012 18284298 -67154182 - AluSq SINE Alu -27 286 1 1137 185 64 54 chr17 18284298 18284397 -67154083 - MER2 DNA MER2_type -234 111 2 328 125 0 18 chr17 18284397 18284447 -67154033 - MLT1B LTR MaLR -320 70 22 1798 179 13 19 chr17 18284451 18284763 -67153717 + AluJo SINE Alu 3 312 0 311 133 150 0 chr17 18284780 18284840 -67153640 + LTR16C LTR ERVL 413 481 -10 442 277 8 8 chr17 18285052 18285171 -67153309 - L2 LINE L2 -252 3061 2943 269 240 53 0 chr17 18285445 18285520 -67152960 + L3 LINE CR1 1424 1502 -75 290 224 66 0 chr17 18285942 18286018 -67152462 + MIR SINE MIR 60 140 -68 1662 110 80 67 chr17 18286425 18286724 -67151756 - AluSx SINE Alu -9 303 1 2544 78 0 0 chr17 18286888 18287197 -67151283 - AluY SINE Alu -2 309 1 199 344 96 8 chr17 18287281 18287406 -67151074 - L2 LINE L2 -1 3271 3136 1256 191 73 73 chr17 18287463 18287769 -67150711 - MLT1D LTR MaLR 0 505 197 2281 110 0 13 chr17 18287769 18287941 -67150539 - AluSq SINE Alu -8 305 137 2480 87 0 0 chr17 18287941 18288239 -67150241 - AluSg SINE Alu -12 298 1 2281 110 0 13 chr17 18288239 18288375 -67150105 - AluSq SINE Alu -176 137 1 1256 191 73 73 chr17 18288375 18288508 -67149972 - MLT1D LTR MaLR -307 198 66 862 254 91 53 chr17 18288512 18288721 -67149759 - MSTD LTR MaLR -8 388 157 1621 175 7 34 chr17 18288721 18289018 -67149462 - AluJb SINE Alu -23 289 1 862 254 91 53 chr17 18289018 18289182 -67149298 - MSTD LTR MaLR -239 157 1 5542 213 92 47 chr17 18289183 18289533 -67148947 - MSTC-int LTR MaLR -1 1734 1401 2222 76 0 0 chr17 18289533 18289795 -67148685 - AluSc SINE Alu -45 264 3 5542 213 92 47 chr17 18289795 18290428 -67148052 - MSTC-int LTR MaLR -334 1401 798 2224 103 0 4 chr17 18290428 18290745 -67147735 - AluSg SINE Alu 0 316 1 5542 213 92 47 chr17 18290745 18291416 -67147064 - MSTC-int LTR MaLR -937 798 2 1046 172 88 78 chr17 18291418 18291738 -67146742 - MSTC LTR MaLR 0 428 52 818 141 0 25 chr17 18291762 18291883 -67146597 - FLAM_C SINE Alu -25 118 1 1929 64 64 24 chr17 18291894 18292144 -67146336 - AluY SINE Alu -12 299 40 300 122 20 0 chr17 18292145 18292194 -67146286 - MSTC LTR MaLR -346 50 1 235 231 19 0 chr17 18292200 18292252 -67146228 - MLT1D LTR MaLR -443 62 10 181 209 0 119 chr17 18292341 18292408 -67146072 + L2 LINE L2 3214 3272 0 1969 144 3 10 chr17 18292447 18292746 -67145734 + AluJb SINE Alu 1 297 -15 443 293 33 0 chr17 18293123 18293273 -67145207 + L2 LINE L2 2919 3073 -240 2010 135 7 4 chr17 18293321 18293635 -67144845 + AluSq SINE Alu 1 315 0 3151 153 93 8 chr17 18294512 18295575 -67142905 + LTR12 LTR ERV1 1 714 0 1849 156 3 36 chr17 18295682 18295844 -67142636 - AluSg SINE Alu -18 292 143 1987 130 0 10 chr17 18295844 18296136 -67142344 - AluSx SINE Alu -19 293 5 1849 156 3 36 chr17 18296136 18296275 -67142205 - AluSg SINE Alu -167 143 1 1225 178 20 24 chr17 18296637 18296870 -67141610 + L1MB5 LINE L1 5184 5418 -756 2168 104 17 3 chr17 18296870 18297167 -67141313 + AluSx SINE Alu 1 301 -11 1225 178 20 24 chr17 18297167 18297267 -67141213 + L1MB5 LINE L1 5418 5517 -657 2167 146 0 0 chr17 18297275 18297584 -67140896 + AluSx SINE Alu 1 309 -3 2045 185 28 59 chr17 18297584 18297797 -67140683 + L1MB5 LINE L1 5669 5887 -287 2473 78 0 7 chr17 18297797 18298106 -67140374 + AluSq SINE Alu 2 308 -5 2045 185 28 59 chr17 18298106 18298369 -67140111 + L1MB5 LINE L1 5887 6131 -43 1866 126 81 3 chr17 18298369 18298654 -67139826 + AluJo SINE Alu 1 307 -5 2045 185 28 59 chr17 18298654 18298684 -67139796 + L1MB5 LINE L1 6131 6160 -14 332 392 18 18 chr17 18298684 18298855 -67139625 + L1M4 LINE L1 5232 5402 -744 2361 75 6 43 chr17 18299114 18299436 -67139044 - AluSg SINE Alu 0 310 1 1294 205 6 116 chr17 18299462 18299610 -67138870 + AluSp SINE Alu 1 164 -149 2327 108 0 0 chr17 18299610 18299905 -67138575 + AluSg SINE Alu 1 295 -15 1294 205 6 116 chr17 18299905 18299917 -67138563 + AluSp SINE Alu 164 176 -137 2312 104 0 13 chr17 18299917 18300224 -67138256 + AluSx SINE Alu 1 303 -9 1294 205 6 116 chr17 18300224 18300408 -67138072 + AluSp SINE Alu 176 308 -5 182 262 0 0 chr17 18300812 18300854 -67137626 - MIR SINE MIR -109 153 112 246 319 44 0 chr17 18300909 18301000 -67137480 + MIR3 SINE MIR 93 187 -21 2336 85 7 16 chr17 18301849 18302154 -67136326 + AluSq SINE Alu 7 308 -5 234 136 0 0 chr17 18302165 18302209 -67136271 + (TG)n Simple_repeat Simple_repeat 2 45 0 457 224 26 72 chr17 18302280 18302432 -67136048 - MIR3 SINE MIR -37 171 27 357 346 31 15 chr17 18302962 18303092 -67135388 + MER91C DNA MER1_type 9 140 0 2234 97 19 16 chr17 18303146 18303457 -67135023 - AluSx SINE Alu 0 312 1 269 280 79 9 chr17 18303744 18303958 -67134522 + L2 LINE L2 2380 2608 -706 2232 122 3 0 chr17 18304023 18304326 -67134154 + AluSx SINE Alu 1 304 -8 1996 106 64 0 chr17 18304326 18304614 -67133866 + AluSx SINE Alu 1 305 0 1179 145 92 46 chr17 18304633 18304691 -67133789 + L1MB5 LINE L1 5879 5933 -241 1760 149 45 14 chr17 18304691 18304980 -67133500 + AluJb SINE Alu 1 298 -14 2342 122 0 0 chr17 18304982 18305294 -67133186 + AluSx SINE Alu 1 312 0 1179 145 92 46 chr17 18305294 18305515 -67132965 + L1MB5 LINE L1 5933 6174 0 210 362 28 35 chr17 18305826 18305967 -67132513 + L2 LINE L2 3123 3262 -51 638 135 0 35 chr17 18306198 18306339 -67132141 + (TTCTCC)n Simple_repeat Simple_repeat 4 139 0 2381 107 0 0 chr17 18306343 18306652 -67131828 - AluSx SINE Alu -3 309 1 434 216 155 0 chr17 18306669 18306785 -67131695 - L1MEc LINE L1 -2984 3231 3098 231 43 106 0 chr17 18306787 18306834 -67131646 + CT-rich Low_complexity Low_complexity 1 52 0 2065 153 0 0 chr17 18306834 18307129 -67131351 - AluSx SINE Alu -17 295 1 422 237 13 94 chr17 18307131 18307221 -67131259 - L1MEc LINE L1 -3106 3109 3013 1922 182 3 6 chr17 18307221 18307534 -67130946 - AluJb SINE Alu 0 312 1 422 237 13 94 chr17 18307534 18307558 -67130922 - L1MEc LINE L1 -3202 3013 2989 2059 108 59 0 chr17 18307558 18307845 -67130635 - AluSq SINE Alu -9 304 1 422 237 13 94 chr17 18307845 18308455 -67130025 - L1MEc LINE L1 -3226 2989 2331 2405 106 3 0 chr17 18308455 18308767 -67129713 - AluSp SINE Alu 0 313 1 422 237 13 94 chr17 18308767 18308849 -67129631 - L1MEc LINE L1 -3884 2331 2244 2305 116 0 0 chr17 18308849 18309152 -67129328 + AluSx SINE Alu 1 303 -9 1086 119 30 0 chr17 18309252 18309633 -67128847 + (CACCAT)n Simple_repeat Simple_repeat 1 392 0 606 93 0 0 chr17 18309693 18309779 -67128701 + HY3 scRNA scRNA 14 99 -2 21 0 0 0 chr17 18309779 18309800 -67128680 + AT_rich Low_complexity Low_complexity 1 21 0 185 339 17 0 chr17 18309919 18309978 -67128502 - MIR3 SINE MIR -48 160 101 322 327 72 14 chr17 18310216 18310494 -67127986 + L1M4 LINE L1 3966 4259 -1887 2422 69 13 10 chr17 18310547 18310853 -67127627 + AluY SINE Alu 1 307 -4 896 194 0 0 chr17 18310890 18311050 -67127430 + FRAM SINE Alu 1 160 -6 668 247 186 30 chr17 18311747 18312119 -67126361 - MLT1G LTR MaLR 0 590 161 2163 104 0 0 chr17 18312160 18312468 -67126012 + AluSx SINE Alu 5 312 0 452 355 36 7 chr17 18312513 18312820 -67125660 - MERVL LTR ERVL -1261 4224 3909 853 153 51 0 chr17 18312910 18313087 -67125393 - MER53 DNA DNA -3 186 1 1134 312 109 55 chr17 18313093 18314019 -67124461 - MERVL LTR ERVL -1841 3923 2948 216 111 0 0 chr17 18314028 18314064 -67124416 + (TC)n Simple_repeat Simple_repeat 1 36 0 34 42 0 0 chr17 18314864 18314912 -67123568 + AT_rich Low_complexity Low_complexity 1 48 0 434 305 98 11 chr17 18315135 18315283 -67123197 + L1ME4a LINE L1 5812 5979 -142 2263 131 0 0 chr17 18315283 18315589 -67122891 + AluSx SINE Alu 1 306 -6 434 305 98 11 chr17 18315589 18315614 -67122866 + L1ME4a LINE L1 5979 6000 -121 357 295 0 9 chr17 18315614 18315719 -67122761 - MLT1L LTR MaLR -390 225 122 204 258 0 48 chr17 18316679 18316741 -67121739 + L2 LINE L2 3243 3301 -12 265 325 12 0 chr17 18317123 18317216 -67121264 - MIR SINE MIR -61 147 58 2214 149 3 11 chr17 18317420 18317788 -67120692 - MLT1A1 LTR MaLR 0 365 1 2378 112 0 0 chr17 18318272 18318584 -67119896 - AluSx SINE Alu 0 312 1 1681 176 105 34 chr17 18318777 18318882 -67119598 - MSTB LTR MaLR -48 378 282 2197 136 0 0 chr17 18318882 18319176 -67119304 + AluSx SINE Alu 1 294 -18 1681 176 105 34 chr17 18319176 18319422 -67119058 - MSTB LTR MaLR -144 282 2 325 284 101 0 chr17 18319427 18319536 -67118944 + MIR3 SINE MIR 67 186 -22 1052 178 47 5 chr17 18320518 18320732 -67117748 - AluJo SINE Alu 0 306 85 412 167 0 0 chr17 18320732 18320798 -67117682 - AluSp/q SINE Alu -63 250 185 2414 99 0 13 chr17 18320905 18321219 -67117261 + AluSq SINE Alu 1 310 -3 848 238 22 2 chr17 18322265 18322492 -67115988 - MIR SINE MIR 0 262 34 1292 188 41 10 chr17 18322825 18323056 -67115424 + MER33 DNA MER1_type 1 244 -2341 2148 131 47 0 chr17 18323056 18323354 -67115126 - AluSx SINE Alu 0 312 1 1292 188 41 10 chr17 18323354 18323414 -67115066 + MER33 DNA MER1_type 244 301 -23 275 276 51 0 chr17 18323616 18323714 -67114766 - MIR SINE MIR -148 114 12 231 326 10 20 chr17 18324313 18324411 -67114069 + MIR SINE MIR 51 147 -115 2639 40 3 0 chr17 18325719 18326015 -67112465 + AluSp SINE Alu 1 297 -16 231 260 0 31 chr17 18326355 18326451 -67112029 + (CCG)n Simple_repeat Simple_repeat 2 94 0 314 265 39 0 chr17 18326573 18326675 -67111805 - MIR3 SINE MIR -21 187 82 238 226 81 0 chr17 18326791 18326853 -67111627 + MIR SINE MIR 85 151 -111 1459 147 0 0 chr17 18327248 18327459 -67111021 - AluJb SINE Alu -16 296 86 2338 92 10 0 chr17 18327826 18328121 -67110359 + AluSq SINE Alu 1 298 -15 308 333 8 16 chr17 18328411 18328534 -67109946 + MIR SINE MIR 21 142 -120 329 270 110 0 chr17 18328555 18328680 -67109800 + MIR SINE MIR 44 181 -63 1658 175 87 11 chr17 18328794 18329080 -67109400 + AluJo SINE Alu 4 311 -1 1456 231 127 60 chr17 18329167 18329751 -67108729 + HAL1 LINE L1 265 887 -1620 678 238 24 24 chr17 18329754 18329922 -67108558 + FRAM SINE Alu 1 168 -8 542 272 165 25 chr17 18330709 18331114 -67107366 - L1MC4a LINE L1 -86 6035 5574 393 324 22 11 chr17 18331319 18331501 -67106979 - L1MC/D LINE L1 -1999 5809 5626 374 344 136 34 chr17 18331766 18332289 -67106191 - L1MC/D LINE L1 -898 5248 4673 2525 71 0 0 chr17 18332905 18333201 -67105279 + AluSc SINE Alu 1 296 -13 1083 136 4 110 chr17 18334247 18334475 -67104005 - AluSg/x SINE Alu -5 305 102 511 100 236 143 chr17 18334484 18334624 -67103856 - AluSx SINE Alu -150 162 10 392 286 31 21 chr17 18335233 18335431 -67103049 + L1ME4a LINE L1 5484 5681 -460 4072 129 15 124 chr17 18335431 18336965 -67101515 + pTR5 LTR ERV1 755 2606 0 304 357 54 39 chr17 18337060 18337340 -67101140 + L1ME4a LINE L1 5835 6118 -3 2490 79 10 0 chr17 18337800 18338104 -67100376 + AluSp SINE Alu 1 307 -6 24 32 0 0 chr17 18338731 18338762 -67099718 + AT_rich Low_complexity Low_complexity 1 31 0 2415 80 0 20 chr17 18339402 18339704 -67098776 + AluSx SINE Alu 1 296 -16 332 281 44 0 chr17 18340160 18340274 -67098206 - L2 LINE L2 0 3272 3154 189 292 26 44 chr17 18340293 18340406 -67098074 - L2 LINE L2 -26 3246 3136 263 320 118 17 chr17 18342853 18343031 -67095449 - MIR SINE MIR -2 260 65 24 32 0 0 chr17 18343691 18343722 -67094758 + AT_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr17 18344507 18344530 -67093950 + (CCG)n Simple_repeat Simple_repeat 1 23 0 203 59 0 29 chr17 18345575 18345609 -67092871 + (GGCTG)n Simple_repeat Simple_repeat 4 36 0 210 254 17 0 chr17 18347373 18347432 -67091048 + MER91A DNA MER1_type 14 73 -123 1119 111 0 0 chr17 18349501 18349654 -67088826 - AluSg/x SINE Alu -38 274 122 441 244 142 24 chr17 18349655 18349860 -67088620 + L2 LINE L2 2926 3154 -159 2356 78 3 3 chr17 18349929 18350238 -67088242 - AluSc SINE Alu 0 309 1 382 330 103 0 chr17 18350306 18350500 -67087980 - L1ME3 LINE L1 -12 6150 5937 2318 96 0 3 chr17 18350871 18351185 -67087295 + AluSq SINE Alu 1 313 0 2231 229 33 33 chr17 18351197 18351834 -67086646 + L1MB8 LINE L1 5540 6176 -2 216 271 34 59 chr17 18352342 18352460 -67086020 + L2 LINE L2 2929 3043 -270 372 94 0 0 chr17 18352649 18352702 -67085778 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 207 0 0 0 chr17 18353472 18353495 -67084985 + (CTGGGG)n Simple_repeat Simple_repeat 6 28 0 256 100 20 20 chr17 18356456 18356506 -67081974 + (GGGA)n Simple_repeat Simple_repeat 4 53 0 185 252 163 8 chr17 18357244 18357367 -67081113 - L2 LINE L2 -192 3080 2939 600 293 39 14 chr17 18358221 18358429 -67080051 + MER58 DNA MER1_type 56 268 -73 195 186 0 0 chr17 18361038 18361081 -67077399 + C-rich Low_complexity Low_complexity 6 48 0 434 313 42 6 chr17 18362092 18362258 -67076222 - Charlie8 DNA MER1_type -2244 173 2 2033 110 48 0 chr17 18362564 18362854 -67075626 + AluSx SINE Alu 3 306 -6 426 191 22 0 chr17 18363219 18363355 -67075125 + (TCCA)n Simple_repeat Simple_repeat 1 139 0 229 339 85 25 chr17 18363511 18363629 -67074851 + L2 LINE L2 3143 3267 -5 933 203 286 0 chr17 18366167 18366562 -67071918 + MLT1E1 LTR MaLR 147 654 0 692 237 105 23 chr17 18368035 18368254 -67070226 + L1MB5 LINE L1 5928 6164 -10 184 299 104 0 chr17 18368943 18369020 -67069460 - L2 LINE L2 -787 2527 2443 253 302 38 38 chr17 18369646 18369752 -67068728 + MIR SINE MIR 36 141 -121 2272 63 0 11 chr17 18371075 18371361 -67067119 - AluSx SINE Alu -29 283 1 2269 201 55 72 chr17 18373343 18373978 -67064502 - L1MB7 LINE L1 -95 6089 5465 1191 204 134 19 chr17 18373978 18374247 -67064233 + AluJo SINE Alu 3 302 0 2269 201 55 72 chr17 18374247 18374304 -67064176 - L1MB7 LINE L1 -719 5465 5409 2341 88 3 0 chr17 18374322 18374627 -67063853 + AluSc SINE Alu 1 306 -3 251 314 70 26 chr17 18375172 18375207 -67063273 - MER53 DNA DNA -26 163 131 2101 101 0 4 chr17 18375207 18375485 -67062995 + AluSg SINE Alu 1 277 -33 194 0 39 0 chr17 18375487 18375513 -67062967 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 251 314 70 26 chr17 18375513 18375630 -67062850 - MER53 DNA DNA -58 131 1 186 254 102 0 chr17 18376021 18376080 -67062400 + L2 LINE L2 3127 3191 -81 2366 73 3 0 chr17 18376526 18376829 -67061651 - AluSp SINE Alu -7 306 3 668 276 33 38 chr17 18376934 18377144 -67061336 + MIR SINE MIR 25 233 -29 606 292 51 36 chr17 18379296 18379632 -67058848 + L1MC4a LINE L1 5700 6040 -1768 2137 114 10 0 chr17 18379708 18380014 -67058466 + AluSx SINE Alu 1 309 -3 476 333 123 35 chr17 18380059 18380377 -67058103 + L1MC4a LINE L1 6277 6622 -1186 1350 81 0 0 chr17 18380383 18380556 -67057924 + AluSg/x SINE Alu 129 301 -11 487 228 51 30 chr17 18380579 18380782 -67057698 + L1MC5 LINE L1 6673 6978 -1064 954 239 14 40 chr17 18380948 18381564 -67056916 + L1M4 LINE L1 4651 5333 -830 * 1836 207 49 36 chr17 18381560 18382240 -67056240 + L1ME2 LINE L1 4013 4683 -1481 2133 125 3 0 chr17 18382240 18382545 -67055935 + AluSx SINE Alu 1 306 -6 1836 207 49 36 chr17 18382545 18383223 -67055257 + L1ME2 LINE L1 4683 5351 -813 2147 108 20 3 chr17 18383223 18383520 -67054960 - AluSx SINE Alu -10 302 1 1836 207 49 36 chr17 18383520 18384041 -67054439 + L1ME2 LINE L1 5351 6096 -68 1469 156 53 32 chr17 18384041 18384324 -67054156 + AluJo SINE Alu 1 289 -23 1836 207 49 36 chr17 18384324 18384385 -67054095 + L1ME2 LINE L1 6096 6155 -9 1880 118 44 0 chr17 18384390 18384703 -67053777 - AluSx SINE Alu 0 325 1 524 181 45 196 chr17 18384712 18384780 -67053700 + L1MC5 LINE L1 7640 7717 -244 2201 108 3 0 chr17 18384780 18385077 -67053403 + AluSg SINE Alu 1 298 -12 524 181 45 196 chr17 18385077 18385345 -67053135 + L1MC5 LINE L1 7717 7925 -36 250 331 74 16 chr17 18385354 18385475 -67053005 + MIR SINE MIR 55 182 -80 216 333 287 0 chr17 18385624 18385798 -67052682 - MIR SINE MIR -6 256 33 230 191 16 16 chr17 18386910 18386973 -67051507 + (CAGCC)n Simple_repeat Simple_repeat 1 63 0 1378 162 0 0 chr17 18387850 18388066 -67050414 + AluJo SINE Alu 86 301 -11 820 180 0 0 chr17 18388630 18388769 -67049711 - FLAM_C SINE Alu 0 143 5 473 282 163 28 chr17 18388773 18389092 -67049388 - L1ME2 LINE L1 -56 6108 5747 201 191 0 48 chr17 18390357 18390399 -67048081 + L2 LINE L2 3229 3268 -4 182 318 32 0 chr17 18391158 18391221 -67047259 - MIR SINE MIR -108 154 90 2314 109 0 0 chr17 18391462 18391773 -67046707 - AluSx SINE Alu -1 311 1 246 311 0 75 chr17 18392175 18392281 -67046199 - MIR SINE MIR -47 215 118 308 176 95 14 chr17 18392532 18392606 -67045874 + MER5A DNA MER1_type 14 93 -96 2076 133 0 0 chr17 18393061 18393355 -67045125 - AluSq SINE Alu -19 294 1 298 301 66 7 chr17 18393623 18393759 -67044721 - MIR SINE MIR -62 200 57 208 413 10 20 chr17 18393711 18393762 -67044718 + MIR3 SINE MIR 7 57 -151 * 2220 78 58 0 chr17 18393762 18394056 -67044424 - AluSq SINE Alu -2 311 1 208 413 10 20 chr17 18394056 18394205 -67044275 + MIR3 SINE MIR 57 205 -3 249 346 19 0 chr17 18396971 18397078 -67041402 - L2 LINE L2 -238 3034 2926 372 59 0 0 chr17 18397139 18397190 -67041290 + (TCC)n Simple_repeat Simple_repeat 3 53 0 2275 69 14 0 chr17 18398046 18398337 -67040143 - AluSp SINE Alu -18 295 1 1503 162 33 53 chr17 18398513 18398675 -67039805 - AluJo SINE Alu -16 296 132 186 43 0 0 chr17 18398675 18398698 -67039782 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2155 83 0 0 chr17 18398698 18398964 -67039516 - AluSg SINE Alu -28 282 17 1503 162 33 53 chr17 18398964 18399102 -67039378 - AluJo SINE Alu -178 134 1 439 287 23 0 chr17 18399118 18399247 -67039233 - L1MD3 LINE L1 -11 7984 7853 1896 198 100 0 chr17 18400005 18400445 -67038035 - MER6 DNA MER2_type -350 515 32 233 324 36 9 chr17 18400471 18400582 -67037898 + L1MC/D LINE L1 5654 5767 -2041 1695 91 5 0 chr17 18401413 18401634 -67036846 + AluSx SINE Alu 1 222 -90 1388 82 0 0 chr17 18401634 18401816 -67036664 + AluSg/x SINE Alu 113 294 -18 2259 103 0 6 chr17 18404096 18404408 -67034072 - AluSx SINE Alu -2 310 1 541 316 13 0 chr17 18404544 18404702 -67033778 - MIR SINE MIR -39 223 64 180 276 40 26 chr17 18405469 18405545 -67032935 - L2 LINE L2 -15 3257 3181 2194 112 0 0 chr17 18405871 18406166 -67032314 - AluSx SINE Alu -17 295 1 257 284 0 15 chr17 18407077 18407144 -67031336 + L2 LINE L2 3206 3271 -1 1489 176 39 20 chr17 18407552 18407669 -67030811 + AluJo SINE Alu 1 114 -198 252 59 0 0 chr17 18407669 18407703 -67030777 + (CA)n Simple_repeat Simple_repeat 1 34 0 1489 176 39 20 chr17 18407703 18407717 -67030763 + AluJo SINE Alu 114 126 -186 2264 112 0 3 chr17 18407717 18408029 -67030451 + AluSq SINE Alu 1 311 -2 1489 176 39 20 chr17 18408029 18408202 -67030278 + AluJo SINE Alu 126 312 0 285 269 13 13 chr17 18408580 18408658 -67029822 - MIR SINE MIR -59 149 72 354 241 161 0 chr17 18408809 18408921 -67029559 - MIR SINE MIR -109 153 24 264 331 95 41 chr17 18409235 18409404 -67029076 - MIR3 SINE MIR -13 195 18 222 366 90 0 chr17 18410681 18410815 -67027665 - MIR SINE MIR -6 256 111 220 351 14 0 chr17 18411124 18411198 -67027282 - MIR SINE MIR -124 138 64 2118 129 7 0 chr17 18412021 18412323 -67026157 + AluSx SINE Alu 1 304 -8 245 267 92 23 chr17 18413893 18414024 -67024456 - MIR3 SINE MIR -12 196 57 333 109 0 0 chr17 18417513 18417568 -67020912 + (CA)n Simple_repeat Simple_repeat 2 56 0 310 282 126 0 chr17 18417994 18418097 -67020383 - MIR3 SINE MIR -8 200 85 237 132 0 0 chr17 18418310 18418348 -67020132 + (TCC)n Simple_repeat Simple_repeat 1 38 0 321 204 34 23 chr17 18418552 18418640 -67019840 + MER81 DNA DNA 1 89 -25 190 321 19 0 chr17 18419585 18419638 -67018842 - L2 LINE L2 -11 3261 3208 397 268 63 0 chr17 18419861 18419988 -67018492 + MER20 DNA MER1_type 27 161 -58 268 264 0 0 chr17 18420685 18420738 -67017742 + L2 LINE L2 3219 3271 -1 545 255 240 19 chr17 18421142 18421190 -67017290 + L2 LINE L2 2245 2281 -1032 1667 177 33 3 chr17 18421190 18421490 -67016990 - AluJb SINE Alu -3 309 1 545 255 240 19 chr17 18421490 18422091 -67016389 + L2 LINE L2 2281 3059 -254 230 278 237 0 chr17 18422239 18422336 -67016144 + MIR SINE MIR 106 225 -37 2308 95 0 0 chr17 18422397 18422693 -67015787 + AluSx SINE Alu 1 296 -16 1874 118 61 17 chr17 18422693 18422990 -67015490 + AluSg SINE Alu 1 310 0 999 194 45 0 chr17 18423016 18423217 -67015263 - MER2 DNA MER2_type -135 210 1 1652 141 0 0 chr17 18423272 18423521 -67014959 - AluJb SINE Alu -12 300 52 189 0 0 0 chr17 18423735 18423756 -67014724 + (A)n Simple_repeat Simple_repeat 1 21 0 2379 88 0 3 chr17 18423804 18424111 -67014369 - AluSx SINE Alu -6 306 1 988 228 186 42 chr17 18424500 18424930 -67013550 - MLT1D LTR MaLR -7 498 7 249 265 31 0 chr17 18426854 18426958 -67011522 + L1ME LINE L1 5355 5459 -705 2583 37 0 0 chr17 18427225 18427524 -67010956 + AluY SINE Alu 1 299 -12 736 85 0 0 chr17 18427663 18427757 -67010723 - AluJo/FRAM SINE Alu -16 296 203 1487 115 115 4 chr17 18427757 18427992 -67010488 + AluJo SINE Alu 35 295 -17 33 0 0 0 chr17 18427992 18428025 -67010455 + AT_rich Low_complexity Low_complexity 1 33 0 34 60 0 24 chr17 18428077 18428120 -67010360 + AT_rich Low_complexity Low_complexity 1 43 -39 846 73 0 18 chr17 18428120 18428229 -67010251 + U6 snRNA snRNA 1 107 0 1493 72 16 0 chr17 18428229 18428423 -67010057 + L1PA7 LINE L1 5953 6149 -5 34 60 0 24 chr17 18428423 18428462 -67010018 + AT_rich Low_complexity Low_complexity 41 82 0 2236 97 10 0 chr17 18428885 18429185 -67009295 + AluSx SINE Alu 1 303 -9 198 103 0 0 chr17 18429569 18429598 -67008882 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 2120 96 3 0 chr17 18429707 18429989 -67008491 + AluSg SINE Alu 21 303 -7 2259 103 0 0 chr17 18432271 18432572 -67005908 + AluSg SINE Alu 1 301 -9 2185 102 3 3 chr17 18432583 18432888 -67005592 + AluSq SINE Alu 1 305 -8 218 293 83 45 chr17 18432982 18433115 -67005365 + MIR SINE MIR 15 152 -110 2450 68 0 7 chr17 18433641 18433950 -67004530 - AluY SINE Alu -4 307 1 816 172 0 21 chr17 18433954 18434099 -67004381 - AluJb SINE Alu -170 142 1 297 369 60 0 chr17 18434302 18434470 -67004010 + MIR SINE MIR 81 258 -4 2324 94 0 0 chr17 18434545 18434854 -67003626 + AluSx SINE Alu 1 309 -3 386 217 22 0 chr17 18434866 18434958 -67003522 + L1M4 LINE L1 2482 2575 -3571 2376 57 3 7 chr17 18435290 18435588 -67002892 + AluY SINE Alu 1 297 -14 1150 56 25 0 chr17 18435628 18435789 -67002691 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 2148 259 139 17 chr17 18435896 18436210 -67002270 + L1M4 LINE L1 2711 2985 -3161 2270 119 0 0 chr17 18436210 18436522 -67001958 + AluSx SINE Alu 1 312 0 2148 259 139 17 chr17 18436522 18437069 -67001411 + L1M4 LINE L1 2985 3733 -2413 1745 123 41 38 chr17 18437069 18437193 -67001287 + AluSx SINE Alu 1 123 -189 216 0 0 0 chr17 18437193 18437217 -67001263 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1745 123 41 38 chr17 18437217 18437385 -67001095 + AluSx SINE Alu 123 294 -18 2148 259 139 17 chr17 18437385 18437601 -67000879 + L1M4 LINE L1 3733 3921 -2225 2236 100 0 3 chr17 18438450 18438751 -66999729 - AluSp SINE Alu -13 300 1 25 0 0 0 chr17 18438761 18438786 -66999694 + AT_rich Low_complexity Low_complexity 1 25 0 322 167 26 135 chr17 18438927 18439083 -66999397 + Charlie5 DNA MER1_type 2484 2622 0 231 278 65 19 chr17 18439614 18439722 -66998758 + L1ME3A LINE L1 6053 6165 -5 345 291 299 11 chr17 18441729 18442103 -66996377 - L2 LINE L2 -1 3312 2831 2293 92 3 0 chr17 18442133 18442427 -66996053 + AluSx SINE Alu 1 295 -17 2045 89 0 0 chr17 18443270 18443517 -66994963 + AluSg SINE Alu 13 259 -51 2366 88 14 0 chr17 18443519 18443814 -66994666 + AluSg SINE Alu 1 299 -11 430 346 80 31 chr17 18443888 18444177 -66994303 - L3 LINE CR1 -37 1540 1238 221 264 149 0 chr17 18444417 18444504 -66993976 + MIR SINE MIR 152 251 -11 1910 147 3 29 chr17 18444507 18444819 -66993661 + AluJo SINE Alu 1 304 -8 435 293 98 53 chr17 18445443 18445765 -66992715 + L2 LINE L2 2883 3222 -91 2336 105 0 3 chr17 18445765 18446069 -66992411 - AluSx SINE Alu -9 303 1 435 293 98 53 chr17 18446069 18446084 -66992396 + L2 LINE L2 3222 3235 -78 524 167 0 0 chr17 18446099 18446183 -66992297 - FRAM/FAM SINE Alu -95 81 1 2246 95 3 20 chr17 18446196 18446491 -66991989 - AluSx SINE Alu -22 290 1 326 250 73 10 chr17 18446492 18446588 -66991892 + L2 LINE L2 3208 3309 -4 303 205 84 12 chr17 18446593 18446676 -66991804 + MIR SINE MIR 64 152 -56 2260 112 3 3 chr17 18446730 18447026 -66991454 + AluSq SINE Alu 1 296 -17 1955 145 3 3 chr17 18447039 18447364 -66991116 + AluJb SINE Alu 1 325 0 509 268 89 16 chr17 18447377 18447567 -66990913 - MIR SINE MIR 0 262 59 373 204 242 6 chr17 18447596 18447753 -66990727 + L2 LINE L2 2782 2975 -339 446 213 55 102 chr17 18447842 18447929 -66990551 + L1MEc LINE L1 1541 1631 -4765 2274 84 24 7 chr17 18447929 18448225 -66990255 + AluSc SINE Alu 1 301 -8 446 213 55 102 chr17 18448225 18448236 -66990244 + L1MEc LINE L1 1631 1641 -4755 2427 108 0 0 chr17 18448236 18448543 -66989937 + AluSx SINE Alu 1 307 -5 446 213 55 102 chr17 18448543 18448697 -66989783 + L1MEc LINE L1 1641 1782 -4614 587 267 128 0 chr17 18448779 18448974 -66989506 + L1MEc LINE L1 2628 2847 -3368 1307 69 52 0 chr17 18448984 18449157 -66989323 - AluSp SINE Alu -18 295 114 622 196 0 23 chr17 18449196 18449329 -66989151 - FLAM_C SINE Alu -3 130 1 232 250 31 10 chr17 18449628 18449724 -66988756 + MLT1K LTR MaLR 142 239 -349 1939 149 14 10 chr17 18449756 18450051 -66988429 + AluJb SINE Alu 1 296 -16 320 207 81 46 chr17 18450051 18450138 -66988342 - L1M4 LINE L1 -3273 2873 2784 2197 100 30 0 chr17 18450138 18450437 -66988043 + AluSx SINE Alu 1 308 -4 2127 76 65 0 chr17 18450444 18450721 -66987759 + AluSp SINE Alu 1 295 -18 2333 87 0 3 chr17 18451138 18451458 -66987022 + AluY SINE Alu 1 311 0 2087 115 0 17 chr17 18451555 18451691 -66986789 + AluSx SINE Alu 2 139 -173 2317 108 0 13 chr17 18451691 18452041 -66986439 + AluSc SINE Alu 1 309 0 2087 115 0 17 chr17 18452041 18452191 -66986289 + AluSx SINE Alu 139 283 -29 1422 228 134 29 chr17 18452204 18452718 -66985762 - L1MC4 LINE L1 0 8042 7475 203 303 15 0 chr17 18453225 18453291 -66985189 + MIR3 SINE MIR 104 170 -38 259 279 29 0 chr17 18453320 18453388 -66985092 - MER20B DNA MER1_type -605 178 109 238 310 142 9 chr17 18453556 18453669 -66984811 - MIR SINE MIR -119 143 16 229 356 134 31 chr17 18453793 18453987 -66984493 + MLT1I LTR MaLR 82 295 -114 243 221 10 125 chr17 18454065 18454169 -66984311 + MLT1H LTR MaLR 456 547 -2 558 303 76 0 chr17 18454176 18454374 -66984106 + MIR SINE MIR 47 259 -3 257 330 6 6 chr17 18454806 18454982 -66983498 + (TG)n Simple_repeat Simple_repeat 2 177 0 664 102 92 0 chr17 18455070 18455168 -66983312 - AluSq/x SINE Alu -204 109 3 2669 144 34 32 chr17 18455170 18455704 -66982776 - L1MB7 LINE L1 -357 5827 5293 229 295 36 36 chr17 18456461 18456573 -66981907 + L2 LINE L2 2715 2826 -488 215 180 90 90 chr17 18456584 18456673 -66981807 - L2 LINE L2 -2 3270 3182 183 345 94 34 chr17 18456750 18456985 -66981495 + L2 LINE L2 2852 3100 -172 2321 125 0 0 chr17 18457025 18457328 -66981152 - AluSx SINE Alu -9 303 1 844 131 25 131 chr17 18457512 18457532 -66980948 + MER20 DNA MER1_type 4 25 -194 2293 93 0 3 chr17 18457532 18457822 -66980658 - AluSg SINE Alu -14 296 8 844 131 25 131 chr17 18457822 18457837 -66980643 + MER20 DNA MER1_type 25 40 -179 297 0 0 0 chr17 18457837 18457870 -66980610 + (CA)n Simple_repeat Simple_repeat 1 33 0 844 131 25 131 chr17 18457870 18457993 -66980487 + MER20 DNA MER1_type 40 133 -86 2549 81 0 0 chr17 18457993 18458301 -66980179 + AluY SINE Alu 1 308 -3 844 131 25 131 chr17 18458301 18458377 -66980103 + MER20 DNA MER1_type 133 215 -4 1027 255 95 26 chr17 18458755 18459135 -66979345 + MLT1J2 LTR MaLR 44 449 -1 619 181 0 9 chr17 18459576 18459692 -66978788 - AluJo/FRAM SINE Alu -15 297 183 1267 164 91 17 chr17 18459695 18459927 -66978553 - AluJo SINE Alu -59 253 5 583 290 79 38 chr17 18460117 18460407 -66978073 - MLT1L LTR MaLR -180 435 134 8582 44 12 0 chr17 18460416 18461373 -66977107 - LTR5 LTR ERVK 0 969 1 395 338 19 7 chr17 18462017 18462171 -66976309 - MIR SINE MIR 0 262 107 550 277 7 14 chr17 18462247 18462395 -66976085 + MIR SINE MIR 105 251 -11 296 211 42 42 chr17 18462395 18462490 -66975990 - MIR SINE MIR -104 158 64 402 82 0 16 chr17 18462491 18462545 -66975935 + Alu SINE Alu 1 55 -248 2239 76 35 10 chr17 18462545 18462834 -66975646 + AluSq SINE Alu 11 306 -7 859 253 37 72 chr17 18463315 18463770 -66974710 + L1MC5 LINE L1 7221 7659 -302 1679 182 34 0 chr17 18463771 18464062 -66974418 - AluJb SINE Alu -11 301 1 935 201 5 27 chr17 18464083 18464267 -66974213 + AluJo SINE Alu 117 296 -16 2321 101 16 3 chr17 18464267 18464575 -66973905 + AluSq SINE Alu 1 312 -1 4862 111 4 21 chr17 18464608 18465044 -66973436 - L1PB3 LINE L1 -38 6116 5674 2150 143 7 0 chr17 18465044 18465352 -66973128 - AluSx SINE Alu -2 310 1 4862 111 4 21 chr17 18465352 18465436 -66973044 - L1PB3 LINE L1 -480 5674 5590 2394 97 0 3 chr17 18465436 18465747 -66972733 - AluSp SINE Alu -3 310 1 4862 111 4 21 chr17 18465747 18465988 -66972492 - L1PB3 LINE L1 -564 5590 5367 4802 120 6 45 chr17 18465996 18466495 -66971985 - L1MC1 LINE L1 -13 6320 5803 2161 71 43 11 chr17 18466495 18466775 -66971705 - AluSx SINE Alu -7 305 17 4802 120 6 45 chr17 18466775 18466796 -66971684 - L1MC1 LINE L1 -530 5803 5783 2233 107 4 0 chr17 18466796 18467101 -66971379 - AluSp SINE Alu 0 306 1 4802 120 6 45 chr17 18467101 18467409 -66971071 - L1MC1 LINE L1 -550 5783 5522 644 113 15 88 chr17 18467409 18467440 -66971040 + L1MCa LINE L1 2223 2255 -4171 727 106 68 68 chr17 18467440 18467572 -66970908 + FLAM_C SINE Alu 1 132 -1 644 113 15 88 chr17 18467572 18467633 -66970847 + L1MCa LINE L1 2255 2319 -4107 2361 101 0 0 chr17 18467633 18467921 -66970559 + AluSg SINE Alu 1 288 -22 644 113 15 88 chr17 18467921 18468031 -66970449 + L1MCa LINE L1 2319 2411 -4015 310 318 61 20 chr17 18468140 18468288 -66970192 - L1ME LINE L1 -373 5748 5595 2430 79 16 7 chr17 18468860 18469164 -66969316 - AluSg SINE Alu -3 307 1 2264 88 0 42 chr17 18469698 18470005 -66968475 - AluSg SINE Alu -16 294 1 2393 89 3 0 chr17 18470757 18471049 -66967431 + AluSp SINE Alu 1 293 -20 547 291 31 20 chr17 18472375 18472571 -66965909 - L2 LINE L2 -11 3302 3105 2135 138 0 13 chr17 18473555 18473867 -66964613 - AluSx SINE Alu -4 308 1 272 282 78 49 chr17 18474135 18474277 -66964203 - L2 LINE L2 -32 3281 3136 803 254 47 13 chr17 18474313 18474549 -66963931 + MLT1J LTR MaLR 1 244 -267 288 149 0 104 chr17 18474556 18474623 -66963857 - Alu SINE Alu -2 300 241 2370 82 10 7 chr17 18474623 18474929 -66963551 - AluSx SINE Alu -5 307 1 413 233 0 0 chr17 18474929 18475002 -66963478 + MLT1J LTR MaLR 237 309 -202 293 300 67 0 chr17 18475086 18475176 -66963304 + MIR SINE MIR 73 168 -94 657 227 80 12 chr17 18475189 18475352 -66963128 - MER5A DNA MER1_type -2 187 14 387 172 115 159 chr17 18476245 18476402 -66962078 + MIR SINE MIR 12 161 -101 366 188 47 12 chr17 18476408 18476493 -66961987 - LTR67 LTR ERVL -1 556 469 1441 237 139 16 chr17 18476503 18476941 -66961539 + L1ME3A LINE L1 5676 6167 -3 2447 92 0 0 chr17 18477040 18477343 -66961137 - AluSq SINE Alu -10 303 1 422 261 35 0 chr17 18477394 18477509 -66960971 + MIR SINE MIR 27 145 -117 445 228 26 26 chr17 18477734 18477848 -66960632 - MER5B DNA MER1_type -64 114 1 194 103 0 26 chr17 18478037 18478076 -66960404 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 1271 222 125 23 chr17 18478478 18478892 -66959588 - MLT1C LTR MaLR -4 622 6 419 222 19 28 chr17 18479048 18479156 -66959324 - MER5A DNA MER1_type -80 109 3 193 248 339 8 chr17 18480580 18480701 -66957779 + L3 LINE CR1 1314 1474 -103 2170 93 43 0 chr17 18481615 18481894 -66956586 - AluSx SINE Alu -21 291 1 2621 183 58 6 chr17 18482088 18482601 -66955879 - MLT1F LTR MaLR 0 542 3 230 331 33 58 chr17 18482872 18482993 -66955487 + MLT1K LTR MaLR 103 220 -368 338 211 110 158 chr17 18483039 18483248 -66955232 + MLT1K LTR MaLR 383 581 -7 1247 59 0 30 chr17 18483278 18483481 -66954999 + SVA Other Other 670 866 -520 6453 56 52 47 chr17 18483628 18484636 -66953844 + SVA Other Other 433 1444 0 544 280 63 11 chr17 18485022 18485197 -66953283 - MIR SINE MIR -2 260 77 24 0 0 0 chr17 18486232 18486256 -66952224 + AT_rich Low_complexity Low_complexity 1 24 0 2166 128 11 14 chr17 18486258 18486626 -66951854 - L1MB3 LINE L1 -3 6180 5814 250 152 0 0 chr17 18486639 18486685 -66951795 - L1MB3 LINE L1 -348 5832 5787 670 87 11 0 chr17 18486685 18486777 -66951703 - MER4A LTR ERV1 0 664 572 * 1762 127 74 63 chr17 18486772 18487069 -66951411 - MER4B LTR ERV1 -224 386 83 2484 91 0 0 chr17 18487069 18487376 -66951104 - AluSx SINE Alu -5 307 1 1762 127 74 63 chr17 18487376 18487457 -66951023 - MER4B LTR ERV1 -527 83 4 976 161 55 46 chr17 18487458 18487641 -66950839 - L1MB3 LINE L1 -390 5793 5606 2381 81 7 0 chr17 18487641 18487939 -66950541 - AluSp SINE Alu -13 300 1 976 161 55 46 chr17 18487939 18487972 -66950508 - L1MB3 LINE L1 -577 5606 5575 2231 134 37 17 chr17 18487985 18488395 -66950085 - L1MA4 LINE L1 -6 6294 5877 1399 143 151 12 chr17 18488642 18488901 -66949579 + AluSq SINE Alu 1 295 -8 1169 107 47 18 chr17 18489584 18489753 -66948727 + AluSq SINE Alu 1 174 -139 2053 128 7 7 chr17 18489854 18490152 -66948328 - AluSx SINE Alu -9 303 6 528 336 27 16 chr17 18491477 18491733 -66946747 + MLT1L LTR MaLR 352 610 -5 231 61 0 0 chr17 18491893 18491926 -66946554 + (ATG)n Simple_repeat Simple_repeat 2 34 0 493 265 103 40 chr17 18491928 18492131 -66946349 - MIR SINE MIR -9 253 33 1769 134 22 73 chr17 18492131 18492445 -66946035 - AluJo SINE Alu -14 298 1 493 265 103 40 chr17 18492445 18492464 -66946016 - MIR SINE MIR -229 33 17 434 319 7 0 chr17 18492608 18492752 -66945728 + L1MC4a LINE L1 5674 5818 -1990 1889 110 82 25 chr17 18492755 18493110 -66945370 - THE1C LTR MaLR 0 375 1 250 335 60 33 chr17 18493172 18493354 -66945126 + L1MC4a LINE L1 5822 6008 -1800 1046 261 29 54 chr17 18493644 18494122 -66944358 - L1MC5 LINE L1 -25 7936 7471 5944 36 0 0 chr17 18494690 18495413 -66943067 - L1PA5 LINE L1 -6 6148 5426 2043 60 0 0 chr17 18495413 18495678 -66942802 + L1P LINE L1 4714 4978 -1168 584 217 0 0 chr17 18495821 18495927 -66942553 - MER52A LTR ERV1 0 1755 1650 4957 168 70 61 chr17 18495958 18498063 -66940417 - MER52A-int LTR ERV1 -1679 5739 2085 2079 87 0 8 chr17 18498063 18498329 -66940151 - AluSc SINE Alu -8 301 38 4957 168 70 61 chr17 18498329 18498440 -66940040 - MER52A-int LTR ERV1 -5333 2085 1977 7391 116 13 1 chr17 18498522 18499580 -66938900 - MER52A-int LTR ERV1 -4260 2831 1761 3346 123 21 26 chr17 18499723 18499804 -66938676 - MER52A-int LTR ERV1 -6520 571 491 2118 113 24 7 chr17 18499804 18500096 -66938384 - AluSx SINE Alu -14 298 2 3346 123 21 26 chr17 18500096 18500543 -66937937 - MER52A-int LTR ERV1 -6600 491 46 279 65 0 0 chr17 18500543 18500589 -66937891 + L1PA3 LINE L1 6110 6155 0 323 213 16 0 chr17 18500590 18500651 -66937829 - MER52A-int LTR ERV1 -7029 62 1 8065 186 111 12 chr17 18500651 18502246 -66936234 - MER52A LTR ERV1 0 1755 3 313 328 70 5 chr17 18504207 18504393 -66934087 + L1ME LINE L1 5550 5747 -423 918 194 6 6 chr17 18504802 18504962 -66933518 + AluJb SINE Alu 137 296 -16 204 318 0 0 chr17 18505400 18505463 -66933017 + L2 LINE L2 2979 3041 -231 1229 249 158 10 chr17 18505651 18506350 -66932130 + L2 LINE L2 2494 3292 -21 1819 132 79 7 chr17 18506530 18506810 -66931670 - MER1B DNA MER1_type 0 339 40 1939 141 20 27 chr17 18506904 18507202 -66931278 - AluSx SINE Alu -16 296 1 773 167 57 97 chr17 18507371 18507599 -66930881 - MLT1H LTR MaLR -266 283 65 3330 150 92 34 chr17 18507602 18508275 -66930205 - LTR62 LTR ERVK -5 714 3 328 248 203 21 chr17 18508428 18508708 -66929772 + MLT1H1 LTR MaLR 201 554 -1 1332 219 105 26 chr17 18509748 18510213 -66928267 + MLT1J LTR MaLR 2 503 -8 1644 127 11 93 chr17 18510276 18510339 -66928141 - L1MB7 LINE L1 -8 6176 6109 1782 202 3 3 chr17 18510339 18510651 -66927829 + AluJo SINE Alu 1 312 0 1644 127 11 93 chr17 18510651 18510964 -66927516 - L1MB7 LINE L1 -75 6109 5831 701 300 115 22 chr17 18512401 18512801 -66925679 + L1ME3A LINE L1 5398 5834 -336 431 291 127 32 chr17 18512811 18513000 -66925480 - MLT1K LTR MaLR -327 261 55 407 247 78 19 chr17 18513203 18513357 -66925123 + LTR16A1 LTR ERVL 217 379 -78 209 209 0 0 chr17 18513509 18513552 -66924928 + MIR SINE MIR 91 133 -75 1217 279 54 56 chr17 18513558 18513666 -66924814 + L1ME4a LINE L1 5326 5433 -688 1896 166 3 25 chr17 18513666 18513985 -66924495 + AluJb SINE Alu 1 312 0 1217 279 54 56 chr17 18513985 18514590 -66923890 + L1ME4a LINE L1 5433 6039 -82 2169 122 0 25 chr17 18514590 18514910 -66923570 - AluSx SINE Alu 0 312 1 1217 279 54 56 chr17 18514910 18514977 -66923503 + L1ME4a LINE L1 6039 6105 -16 419 291 148 15 chr17 18515013 18515216 -66923264 - MIR SINE MIR -17 245 16 348 24 0 0 chr17 18515739 18515780 -66922700 + (CA)n Simple_repeat Simple_repeat 1 41 0 270 174 248 28 chr17 18515780 18515889 -66922591 + L2 LINE L2 3159 3291 -22 188 67 33 0 chr17 18515895 18515925 -66922555 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 2264 62 4 7 chr17 18516541 18516814 -66921666 + AluSc SINE Alu 21 292 -17 3219 219 29 7 chr17 18516844 18517614 -66920866 + L1MC4a LINE L1 6736 7522 -286 561 208 0 0 chr17 18517660 18517756 -66920724 + MER58A DNA MER1_type 1 96 -11 337 145 26 13 chr17 18517756 18517832 -66920648 + CT-rich Low_complexity Low_complexity 3 79 0 1267 178 0 54 chr17 18517834 18518076 -66920404 - AluJb SINE Alu 0 312 84 983 159 15 0 chr17 18518161 18518362 -66920118 + L1MD3 LINE L1 7779 7982 -13 429 197 39 28 chr17 18518674 18518852 -66919628 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 208 357 0 13 chr17 18518858 18519012 -66919468 + CT-rich Low_complexity Low_complexity 2 153 0 195 234 78 0 chr17 18519059 18519123 -66919357 - MIR3 SINE MIR -25 183 115 277 298 99 14 chr17 18520610 18520751 -66917729 - MIR SINE MIR -14 248 96 1985 146 72 57 chr17 18520801 18521220 -66917260 - MSTC LTR MaLR -3 425 1 382 301 43 41 chr17 18521316 18521498 -66916982 + MIR SINE MIR 33 219 -43 1594 195 0 30 chr17 18522949 18523252 -66915228 - AluJb SINE Alu -3 309 16 1608 205 79 0 chr17 18523254 18523620 -66914860 - L1MB5 LINE L1 0 6174 5780 324 325 33 0 chr17 18523669 18523789 -66914691 - MIR SINE MIR -75 187 64 942 187 18 37 chr17 18523790 18523914 -66914566 - L1MB5 LINE L1 -389 5789 5670 2649 47 0 0 chr17 18523914 18524211 -66914269 - AluY SINE Alu -14 297 1 942 187 18 37 chr17 18524211 18524329 -66914151 - L1MB5 LINE L1 -508 5670 5551 521 272 60 5 chr17 18524655 18524839 -66913641 + MER91A DNA MER1_type 1 194 -2 1882 169 240 0 chr17 18525574 18526024 -66912456 - LTR64 LTR ERVK 0 558 1 385 243 188 28 chr17 18526251 18526624 -66911856 - L2 LINE L2 -250 3063 2628 218 294 76 17 chr17 18526774 18526893 -66911587 + MIR SINE MIR 16 141 -67 215 348 11 0 chr17 18527084 18527176 -66911304 - L3b LINE CR1 -359 1224 1132 237 309 12 0 chr17 18528182 18528263 -66910217 - L2 LINE L2 -334 2979 2898 2341 103 0 0 chr17 18528360 18528650 -66909830 + AluSc SINE Alu 1 290 -19 366 315 9 0 chr17 18529158 18529269 -66909211 - LTR16C LTR ERVL 0 491 380 1192 264 131 14 chr17 18529278 18529739 -66908741 - MLT1F LTR MaLR -8 534 1 683 275 93 59 chr17 18530159 18530262 -66908218 + MLT1E LTR MaLR 40 138 -488 1579 178 13 32 chr17 18530262 18530576 -66907904 - AluJo SINE Alu -4 308 1 683 275 93 59 chr17 18530576 18530836 -66907644 + MLT1E LTR MaLR 138 463 -163 467 250 98 12 chr17 18530907 18531071 -66907409 + L1MC5 LINE L1 7773 7950 -11 560 282 127 27 chr17 18531162 18531681 -66906799 - L2 LINE L2 0 3313 2746 324 249 104 6 chr17 18531681 18531853 -66906627 + MIR SINE MIR 3 196 -63 2075 122 31 0 chr17 18532421 18532715 -66905765 - AluSc SINE Alu -6 303 1 25 0 0 0 chr17 18532731 18532756 -66905724 + AT_rich Low_complexity Low_complexity 1 25 0 547 263 139 12 chr17 18532767 18533018 -66905462 - LTR16C LTR ERVL 0 491 209 1856 100 66 8 chr17 18533138 18533397 -66905083 + AluSx SINE Alu 14 287 -25 1312 216 22 11 chr17 18533416 18533685 -66904795 - AluJo SINE Alu -36 276 5 3190 157 68 9 chr17 18533714 18534602 -66903878 - LTR12 LTR ERV1 0 714 2 1360 279 46 22 chr17 18534602 18535103 -66903377 + MER97a DNA MER1_type? 93 605 -289 2277 95 10 0 chr17 18535219 18535513 -66902967 + AluSp SINE Alu 1 297 -16 509 238 16 57 chr17 18535936 18535994 -66902486 + MER97b DNA MER1_type? 869 928 -125 2302 113 0 0 chr17 18535994 18536296 -66902184 - AluSq SINE Alu -11 302 1 509 238 16 57 chr17 18536296 18536430 -66902050 + MER97b DNA MER1_type? 928 1053 0 201 121 0 0 chr17 18536588 18536621 -66901859 + (CA)n Simple_repeat Simple_repeat 2 34 0 28 0 0 0 chr17 18536629 18536657 -66901823 + AT_rich Low_complexity Low_complexity 1 28 0 331 202 0 0 chr17 18536657 18536741 -66901739 - MER53 DNA DNA -30 159 76 410 293 0 0 chr17 18536741 18536857 -66901623 + AluJo SINE Alu 120 235 -77 363 141 0 0 chr17 18536913 18536977 -66901503 - AluJ/FRAM SINE Alu -15 287 224 548 269 62 39 chr17 18537279 18537487 -66900993 - MIR SINE MIR -19 243 31 240 326 10 41 chr17 18538452 18538550 -66899930 - MIR3 SINE MIR -53 155 61 758 275 155 3 chr17 18539144 18539688 -66898792 - L1MC4 LINE L1 -673 7369 6513 208 0 62 0 chr17 18540091 18540123 -66898357 + (TC)n Simple_repeat Simple_repeat 1 34 0 185 262 131 0 chr17 18540315 18540399 -66898081 + MIR3 SINE MIR 61 155 -53 530 199 16 9 chr17 18540683 18540860 -66897620 + L1MB3 LINE L1 5882 6183 0 467 194 276 0 chr17 18541401 18541535 -66896945 + MER45A DNA AcHobo 7 177 -1 252 0 0 0 chr17 18542915 18542943 -66895537 + (A)n Simple_repeat Simple_repeat 1 28 0 1156 199 87 70 chr17 18542945 18543274 -66895206 + L1MB5 LINE L1 5596 5933 -241 2192 108 0 10 chr17 18543274 18543580 -66894900 + AluSx SINE Alu 1 303 -9 1156 199 87 70 chr17 18543580 18543606 -66894874 + L1MB5 LINE L1 5933 5957 -217 534 284 87 22 chr17 18543615 18543798 -66894682 + MIR SINE MIR 60 254 -8 504 281 28 1 chr17 18543960 18544117 -66894363 - MIR SINE MIR -63 145 24 187 211 14 14 chr17 18544214 18544285 -66894195 + CT-rich Low_complexity Low_complexity 2 72 0 1695 248 44 39 chr17 18544306 18544846 -66893634 + L1ME2 LINE L1 5622 6164 0 293 263 0 53 chr17 18545429 18545524 -66892956 - MIR3 SINE MIR -5 203 114 199 282 223 19 chr17 18545628 18545731 -66892749 - MIR SINE MIR -95 167 44 244 315 81 9 chr17 18546188 18546299 -66892181 - MIR SINE MIR -116 146 28 2087 181 28 5 chr17 18546478 18546903 -66891577 + L1MB7 LINE L1 5686 6120 -64 2005 117 0 27 chr17 18546906 18547236 -66891244 - AluSx SINE Alu 0 329 8 455 226 151 13 chr17 18547357 18547449 -66891031 + MER5A DNA MER1_type 9 87 -102 2072 100 24 0 chr17 18547449 18547740 -66890740 - AluY SINE Alu -13 298 1 455 226 151 13 chr17 18547740 18547806 -66890674 + MER5A DNA MER1_type 87 189 0 439 221 181 0 chr17 18547856 18547983 -66890497 - MER5A DNA MER1_type -39 150 1 463 293 42 0 chr17 18548111 18548278 -66890202 + MER5B DNA MER1_type 1 174 -4 441 276 191 0 chr17 18549204 18549356 -66889124 - MER91A DNA MER1_type -7 189 9 7568 114 66 21 chr17 18549740 18550342 -66888138 - Tigger1 DNA MER2_type 0 2418 1844 1665 164 14 7 chr17 18550342 18550634 -66887846 + AluJb SINE Alu 1 294 -18 7568 114 66 21 chr17 18550634 18551308 -66887172 - Tigger1 DNA MER2_type -574 1844 1085 1460 220 35 9 chr17 18551410 18551756 -66886724 - Tigger6 DNA MER2_type -1233 364 10 185 91 0 30 chr17 18553309 18553342 -66885138 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 69 0 0 chr17 18553370 18553399 -66885081 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 1225 204 62 16 chr17 18553869 18554177 -66884303 - MER33 DNA MER1_type -2 322 1 628 309 62 21 chr17 18554177 18554420 -66884060 + L3 LINE CR1 1306 1558 -19 282 242 42 21 chr17 18555504 18555599 -66882881 + MER103 DNA DNA 59 155 -11 317 291 29 22 chr17 18555734 18555886 -66882594 + MER5B DNA MER1_type 23 186 -3 180 152 0 0 chr17 18556552 18556585 -66881895 + T-rich Low_complexity Low_complexity 1 33 0 825 232 145 56 chr17 18556808 18557201 -66881279 - MLT1C LTR MaLR -34 433 6 191 333 48 24 chr17 18557438 18557522 -66880958 + MIR SINE MIR 107 192 -70 6000 111 22 65 chr17 18557774 18558363 -66880117 - Tigger1 DNA MER2_type -1381 1037 424 862 170 85 0 chr17 18558363 18558516 -66879964 + FAM SINE Alu 3 168 -7 6000 111 22 65 chr17 18558516 18558930 -66879550 - Tigger1 DNA MER2_type -1994 424 80 2289 100 0 0 chr17 18558930 18559240 -66879240 - AluSx SINE Alu -2 310 1 6000 111 22 65 chr17 18559240 18559303 -66879177 - Tigger1 DNA MER2_type -2338 80 16 2634 106 118 137 chr17 18559571 18560080 -66878400 - MER4A LTR ERV1 0 664 147 1191 55 0 0 chr17 18560080 18560226 -66878254 - L1PA11 LINE L1 -1 6173 6028 2634 106 118 137 chr17 18560226 18560244 -66878236 - MER4A LTR ERV1 -517 147 130 2295 74 7 3 chr17 18560244 18560542 -66877938 + AluSc SINE Alu 1 299 -10 2634 106 118 137 chr17 18560542 18560690 -66877790 - MER4A LTR ERV1 -534 130 1 323 262 0 36 chr17 18560692 18560776 -66877704 - MIR SINE MIR -117 145 65 213 280 88 48 chr17 18560858 18560983 -66877497 - L2 LINE L2 -221 3051 2922 948 98 0 0 chr17 18561037 18561169 -66877311 - MER41B LTR ERV1 -398 237 106 853 55 0 0 chr17 18561284 18561393 -66877087 - MER41A LTR ERV1 -445 109 1 260 224 177 20 chr17 18561556 18561703 -66876777 - LTR67 LTR ERVL -1 556 387 2075 100 24 7 chr17 18562268 18562557 -66875923 + AluSx SINE Alu 1 294 -18 210 37 0 0 chr17 18562851 18562878 -66875602 + (GA)n Simple_repeat Simple_repeat 2 28 0 1618 161 0 15 chr17 18562878 18563145 -66875335 - AluJo SINE Alu -34 278 16 1971 212 11 43 chr17 18563148 18563704 -66874776 - L1 LINE L1 -2579 3567 3032 2380 50 0 10 chr17 18563704 18564003 -66874477 - AluY SINE Alu -15 296 1 1971 212 11 43 chr17 18564003 18564077 -66874403 - L1 LINE L1 -3114 3032 2957 1911 123 25 44 chr17 18564077 18564119 -66874361 - AluSx SINE Alu -1 311 270 405 0 0 0 chr17 18564119 18564164 -66874316 + (TTTTA)n Simple_repeat Simple_repeat 2 46 0 1911 123 25 44 chr17 18564164 18564438 -66874042 - AluSx SINE Alu -42 270 1 1199 282 24 16 chr17 18565741 18566113 -66872367 + LTR16C LTR ERVL 98 472 -19 466 150 0 0 chr17 18566225 18566305 -66872175 - MLT1I LTR MaLR 0 409 330 240 218 0 18 chr17 18566440 18566495 -66871985 - MLT1I LTR MaLR -241 168 115 283 214 97 19 chr17 18566591 18566694 -66871786 - MLT1G LTR MaLR -5 550 440 339 242 212 32 chr17 18566730 18566920 -66871560 - MLT1G LTR MaLR -265 330 104 2277 66 14 0 chr17 18567334 18567643 -66870837 + AluSp SINE Alu 1 313 0 353 293 30 0 chr17 18567917 18568050 -66870430 - MIR3 SINE MIR -47 161 25 341 218 204 0 chr17 18569385 18569527 -66868953 - L2 LINE L2 -519 2795 2625 1655 87 22 4 chr17 18569548 18569800 -66868680 + AluSx SINE Alu 51 306 0 752 294 107 9 chr17 18569802 18570139 -66868341 + L1MB2 LINE L1 5802 6171 0 367 244 274 30 chr17 18570769 18570970 -66867510 + MIR SINE MIR 5 254 -8 199 177 21 50 chr17 18571050 18571191 -66867289 + (CCCTG)n Simple_repeat Simple_repeat 4 140 0 279 0 0 0 chr17 18571447 18571478 -66867002 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 2270 101 0 9 chr17 18571560 18571876 -66866604 + AluSq SINE Alu 1 313 0 520 317 85 31 chr17 18571903 18572162 -66866318 + L1MEc LINE L1 2061 2333 -4063 478 302 38 36 chr17 18572193 18572637 -66865843 - L1MEd LINE L1 -3572 2643 2199 390 354 50 61 chr17 18572638 18572980 -66865500 - L1MEd LINE L1 -4159 2237 1900 1820 165 0 0 chr17 18573058 18573349 -66865131 - AluJo SINE Alu -21 291 1 375 297 187 30 chr17 18573435 18573970 -66864510 - L1MEd LINE L1 -928 1648 980 279 0 0 0 chr17 18574307 18574338 -66864142 + (TG)n Simple_repeat Simple_repeat 1 31 0 2095 81 7 7 chr17 18574768 18575077 -66863403 + AluY SINE Alu 1 309 0 2168 101 0 7 chr17 18575086 18575384 -66863096 + AluSx SINE Alu 1 296 -16 203 259 250 17 chr17 18577792 18577908 -66860572 - MIR3 SINE MIR -61 147 5 * 213 333 31 0 chr17 18577891 18577987 -66860493 + MIR SINE MIR 31 129 -133 2165 102 3 0 chr17 18582303 18582597 -66855883 - AluSx SINE Alu -17 295 1 22 35 0 0 chr17 18582961 18582990 -66855490 + AT_rich Low_complexity Low_complexity 1 29 0 235 284 78 28 chr17 18586704 18586845 -66851635 + MLT1K LTR MaLR 378 525 -63 1544 176 3 51 chr17 18586861 18587173 -66851307 - AluJb SINE Alu -13 299 3 814 99 91 0 chr17 18587174 18587295 -66851185 - AluJo SINE Alu -176 136 5 273 298 105 0 chr17 18587475 18587599 -66850881 - MIR3 SINE MIR -39 169 33 226 241 139 13 chr17 18588285 18588364 -66850116 - L2 LINE L2 -46 3226 3138 197 365 35 0 chr17 18589289 18589404 -66849076 + L2 LINE L2 2856 2974 -340 201 147 0 0 chr17 18589419 18589453 -66849027 + (CA)n Simple_repeat Simple_repeat 1 34 0 382 346 48 10 chr17 18589918 18590126 -66848354 - L2 LINE L2 -266 3047 2832 232 211 42 28 chr17 18590116 18590187 -66848293 - MER5C DNA MER1_type -25 299 228 * 244 251 17 0 chr17 18590362 18590429 -66848051 - MIR SINE MIR -70 138 64 668 184 57 13 chr17 18590430 18590588 -66847892 - L1M4 LINE L1 -830 5316 5152 2318 97 7 7 chr17 18590640 18590940 -66847540 - AluSg SINE Alu -10 300 1 256 282 27 94 chr17 18591073 18591222 -66847258 + MIR SINE MIR 110 248 -14 271 265 271 18 chr17 18591254 18591424 -66847056 + MIR SINE MIR 49 261 -1 11154 158 47 41 chr17 18591449 18591865 -66846615 + L1MA3 LINE L1 2771 3183 -2963 2339 104 3 0 chr17 18591865 18592174 -66846306 + AluSg SINE Alu 1 310 0 11154 158 47 41 chr17 18592174 18593662 -66844818 + L1MA3 LINE L1 3183 4661 -1485 2567 63 0 3 chr17 18593662 18593962 -66844518 + AluY SINE Alu 1 299 -12 11154 158 47 41 chr17 18593962 18594196 -66844284 + L1MA3 LINE L1 4661 4892 -1254 2329 101 0 0 chr17 18594196 18594493 -66843987 + AluSx SINE Alu 1 297 -15 11154 158 47 41 chr17 18594493 18594995 -66843485 + L1MA3 LINE L1 4892 5364 -782 1780 165 53 3 chr17 18594999 18595284 -66843196 + AluJb SINE Alu 1 299 -13 985 176 0 0 chr17 18595287 18595446 -66843034 + AluJo/FRAM SINE Alu 141 299 -13 4883 108 76 43 chr17 18595446 18595869 -66842611 + L1MA3 LINE L1 5359 5766 -539 2091 105 7 0 chr17 18595869 18596146 -66842334 + AluSg SINE Alu 30 308 -2 4883 108 76 43 chr17 18596146 18596387 -66842093 + L1MA3 LINE L1 5766 5997 -308 2620 66 0 0 chr17 18596387 18596691 -66841789 + AluY SINE Alu 1 304 -7 4883 108 76 43 chr17 18596691 18596757 -66841723 + L1MA3 LINE L1 5997 6059 -246 2310 103 3 0 chr17 18596757 18597049 -66841431 + AluSx SINE Alu 1 293 -19 4883 108 76 43 chr17 18597049 18597232 -66841248 + L1MA3 LINE L1 6059 6305 0 1348 91 0 0 chr17 18597259 18597424 -66841056 + AluY SINE Alu 128 292 -19 31 0 0 0 chr17 18597535 18597566 -66840914 + AT_rich Low_complexity Low_complexity 1 31 0 997 218 97 21 chr17 18597580 18597915 -66840565 + L1MC1 LINE L1 4397 4705 -1575 2434 75 10 0 chr17 18597915 18598210 -66840270 + AluSc SINE Alu 1 298 -11 997 218 97 21 chr17 18598210 18598422 -66840058 + L1MC1 LINE L1 4705 4899 -1381 2048 113 7 27 chr17 18598422 18598558 -66839922 + AluSq SINE Alu 1 138 -175 2566 76 0 0 chr17 18598558 18598862 -66839618 + AluY SINE Alu 3 306 -5 2048 113 7 27 chr17 18598862 18599025 -66839455 + AluSq SINE Alu 138 294 -19 997 218 97 21 chr17 18599025 18599097 -66839383 + L1MC1 LINE L1 4899 4964 -1316 1707 182 7 24 chr17 18599097 18599393 -66839087 + AluJo SINE Alu 20 310 -2 997 218 97 21 chr17 18599393 18599715 -66838765 + L1MC1 LINE L1 4964 5537 -743 763 123 25 8 chr17 18599721 18599843 -66838637 - L1MC1 LINE L1 0 6333 6210 437 264 18 0 chr17 18599843 18599953 -66838527 + L1MC1 LINE L1 6099 6210 -123 2413 104 0 0 chr17 18600609 18600918 -66837562 + AluY SINE Alu 1 309 -2 554 157 11 0 chr17 18600997 18601086 -66837394 + FRAM SINE Alu 68 157 -19 848 167 0 6 chr17 18601220 18601376 -66837104 - L1MB7 LINE L1 -16 6168 6014 2212 116 6 6 chr17 18601647 18601958 -66836522 + AluY SINE Alu 1 311 0 2266 112 7 0 chr17 18602013 18602309 -66836171 + AluSq SINE Alu 1 298 -15 2520 69 7 0 chr17 18602367 18602670 -66835810 - AluY SINE Alu -6 305 1 1842 164 14 0 chr17 18602680 18602995 -66835485 - AluJb SINE Alu 0 319 1 519 244 72 69 chr17 18603262 18603411 -66835069 + MIR SINE MIR 7 157 -105 2444 72 0 3 chr17 18603411 18603717 -66834763 + AluY SINE Alu 1 305 -6 519 244 72 69 chr17 18603717 18603777 -66834703 + MIR SINE MIR 157 215 -47 2026 142 10 20 chr17 18604736 18604874 -66833606 + AluSx SINE Alu 1 139 -173 2300 117 3 0 chr17 18604874 18605181 -66833299 + AluSg SINE Alu 1 308 -2 2026 142 10 20 chr17 18605181 18605344 -66833136 + AluSx SINE Alu 139 299 -13 278 224 100 116 chr17 18605344 18605477 -66833003 + L1ME4a LINE L1 5820 5949 -172 2066 113 7 14 chr17 18605477 18605759 -66832721 + AluSg SINE Alu 1 280 -30 278 224 100 116 chr17 18605759 18605866 -66832614 + L1ME4a LINE L1 5949 6056 -65 226 222 19 0 chr17 18605902 18605956 -66832524 + MLT1K LTR MaLR 41 95 -493 231 314 24 8 chr17 18606143 18606267 -66832213 + LTR67 LTR ERVL 425 550 -7 344 313 116 31 chr17 18606334 18606558 -66831922 + MIR SINE MIR 8 250 -12 214 347 170 22 chr17 18606607 18606918 -66831562 - L2 LINE L2 0 3313 2957 188 326 204 50 chr17 18606975 18607294 -66831186 - L2 LINE L2 -510 2804 2437 730 218 77 0 chr17 18607548 18607718 -66830762 - MER5A DNA MER1_type -6 183 1 931 154 0 41 chr17 18607845 18608014 -66830466 + FAM SINE Alu 1 162 -13 2172 117 0 28 chr17 18608170 18608487 -66829993 - AluSx SINE Alu -4 308 1 2020 109 17 24 chr17 18608514 18608807 -66829673 + AluSq SINE Alu 1 291 -22 403 162 5 189 chr17 18612434 18612471 -66826009 - L1MA10 LINE L1 0 6334 6298 588 267 10 106 chr17 18612471 18612547 -66825933 - L1ME1 LINE L1 -16 6150 6068 2253 109 6 10 chr17 18612547 18612859 -66825621 + AluSx SINE Alu 1 311 -1 588 267 10 106 chr17 18612859 18613167 -66825313 - L1ME1 LINE L1 -98 6068 5802 2590 190 134 50 chr17 18613217 18613459 -66825021 - L1MB7 LINE L1 -9 6175 5955 2157 116 10 10 chr17 18613459 18613760 -66824720 - AluSq SINE Alu -12 301 1 2590 190 134 50 chr17 18613760 18613879 -66824601 - L1MB7 LINE L1 -229 5955 5847 2425 92 3 0 chr17 18613879 18614183 -66824297 - AluSp SINE Alu -6 307 3 2118 110 7 16 chr17 18614185 18614493 -66823987 - AluSq SINE Alu -7 306 2 2590 190 134 50 chr17 18614493 18614705 -66823775 - L1MB7 LINE L1 -337 5847 5654 2251 106 10 3 chr17 18614705 18615006 -66823474 - AluSx SINE Alu -9 303 1 2590 190 134 50 chr17 18615006 18615090 -66823390 - L1MB7 LINE L1 -530 5654 5578 423 205 116 18 chr17 18615090 18615202 -66823278 - FLAM_A SINE Alu -10 123 1 2590 190 134 50 chr17 18615202 18615331 -66823149 - L1MB7 LINE L1 -606 5578 5315 2529 77 0 0 chr17 18615340 18615651 -66822829 + AluY SINE Alu 1 311 0 2190 93 4 0 chr17 18615675 18616003 -66822477 + AluY SINE Alu 1 329 0 2227 106 0 0 chr17 18616013 18616319 -66822161 + AluSq SINE Alu 1 306 0 1750 165 0 26 chr17 18616331 18616634 -66821846 + AluSg SINE Alu 1 295 -15 2311 90 16 13 chr17 18616634 18616944 -66821536 + AluY SINE Alu 1 311 0 576 295 39 73 chr17 18616992 18617433 -66821047 + L2 LINE L2 2842 3267 -5 24 0 0 0 chr17 18617539 18617563 -66820917 + AT_rich Low_complexity Low_complexity 1 24 0 804 303 125 16 chr17 18617594 18618170 -66820310 - L2 LINE L2 -2 3311 2669 2367 84 0 3 chr17 18618354 18618651 -66819829 + AluSx SINE Alu 1 296 -16 187 306 42 49 chr17 18618811 18618955 -66819525 + L2 LINE L2 2925 3067 -205 198 371 90 22 chr17 18619008 18619097 -66819383 + L2 LINE L2 3201 3295 -18 2280 82 9 32 chr17 18619384 18619699 -66818781 - AluSp SINE Alu -5 308 1 1791 143 3 48 chr17 18619708 18620002 -66818478 - AluJo SINE Alu -21 291 11 2492 79 0 7 chr17 18620026 18620329 -66818151 - AluSp SINE Alu -12 301 1 259 275 33 17 chr17 18620334 18620454 -66818026 - MER103 DNA DNA -13 153 32 279 208 0 19 chr17 18620522 18620575 -66817905 - L2 LINE L2 -11 3261 3210 281 291 142 31 chr17 18620581 18620708 -66817772 - MIR SINE MIR -113 149 9 1139 182 4 54 chr17 18621122 18621337 -66817143 + L1MB7 LINE L1 4822 5023 -1123 2502 54 0 10 chr17 18621337 18621634 -66816846 - AluY SINE Alu -17 294 1 1139 182 4 54 chr17 18621634 18621676 -66816804 + L1MB7 LINE L1 5023 5066 -1080 1097 96 0 0 chr17 18621676 18621812 -66816668 - AluSq/x SINE Alu -177 136 1 1688 142 3 82 chr17 18621817 18622134 -66816346 - AluSx SINE Alu -20 292 1 365 175 39 10 chr17 18622137 18622240 -66816240 - L1M LINE L1 -789 5395 5290 886 132 39 0 chr17 18622293 18622422 -66816058 - AluJo SINE Alu -178 134 1 808 202 12 57 chr17 18622422 18622565 -66815915 - L1M4 LINE L1 -844 5302 5173 2488 74 0 0 chr17 18622565 18622863 -66815617 + AluY SINE Alu 1 298 -13 808 202 12 57 chr17 18622863 18622966 -66815514 - L1M4 LINE L1 -973 5173 5067 3676 150 25 59 chr17 18623009 18623282 -66815198 + L1MB7 LINE L1 5386 5667 -517 1671 191 3 7 chr17 18623282 18623575 -66814905 + AluJo SINE Alu 19 310 -2 3676 150 25 59 chr17 18623575 18624086 -66814394 + L1MB7 LINE L1 5667 6143 -41 2427 76 0 0 chr17 18624086 18624377 -66814103 - AluSg SINE Alu -19 291 1 3676 150 25 59 chr17 18624377 18624418 -66814062 + L1MB7 LINE L1 6143 6184 0 2281 89 0 36 chr17 18624628 18624815 -66813665 - AluSq SINE Alu -20 293 120 2083 133 3 10 chr17 18624815 18625115 -66813365 - AluSx SINE Alu -14 298 1 2281 89 0 36 chr17 18625115 18625231 -66813249 - AluSq SINE Alu -193 120 1 971 78 0 0 chr17 18625231 18625347 -66813133 - AluSq/x SINE Alu -196 116 1 420 250 88 22 chr17 18625349 18625485 -66812995 + L2 LINE L2 3167 3311 -2 2415 67 0 0 chr17 18625487 18625771 -66812709 - AluSp SINE Alu -27 286 3 425 258 0 0 chr17 18626745 18626842 -66811638 - MIR SINE MIR -61 147 51 22 0 0 0 chr17 18627275 18627297 -66811183 + GC_rich Low_complexity Low_complexity 1 22 0 340 217 225 43 chr17 18627881 18628019 -66810461 + MIR SINE MIR 1 163 -99 266 274 14 0 chr17 18628348 18628421 -66810059 + MIR SINE MIR 50 123 -85 24 0 0 0 chr17 18628839 18628863 -66809617 + GC_rich Low_complexity Low_complexity 1 24 0 34 55 0 0 chr17 18629032 18629087 -66809393 + GC_rich Low_complexity Low_complexity 1 55 0 305 222 0 62 chr17 18629575 18629656 -66808824 - L2 LINE L2 -75 3238 3163 1537 142 83 31 chr17 18629810 18630098 -66808382 - AluJo SINE Alu -9 303 1 2305 133 40 3 chr17 18630098 18630473 -66808007 - L1PA15 LINE L1 -6 6159 5771 2311 91 13 0 chr17 18630476 18630774 -66807706 - AluSq SINE Alu -11 302 1 1105 58 0 36 chr17 18630775 18630914 -66807566 - AluSq/x SINE Alu -179 134 1 4446 161 118 27 chr17 18630914 18631882 -66806598 - MER52A LTR ERV1 -522 1233 217 2398 55 7 0 chr17 18631928 18632218 -66806262 + AluSp SINE Alu 1 292 -21 1639 207 65 2 chr17 18632230 18632446 -66806034 - L1M4 LINE L1 -1302 4844 4643 405 0 0 0 chr17 18632446 18632491 -66805989 + (CA)n Simple_repeat Simple_repeat 2 46 0 1639 207 65 2 chr17 18632491 18632689 -66805791 - L1M4 LINE L1 -1503 4643 4404 2222 87 3 24 chr17 18632689 18633008 -66805472 - AluSp SINE Alu 0 315 3 24 0 0 0 chr17 18633012 18633036 -66805444 + AT_rich Low_complexity Low_complexity 1 24 0 274 238 14 77 chr17 18633051 18633158 -66805322 + L1MEc LINE L1 1406 1503 -4893 2519 70 0 0 chr17 18633158 18633459 -66805021 + AluY SINE Alu 1 301 -10 274 238 14 77 chr17 18633459 18633494 -66804986 + L1MEc LINE L1 1503 1539 -4857 2326 105 0 0 chr17 18633517 18633811 -66804669 + AluSx SINE Alu 1 294 -18 3695 150 32 14 chr17 18633811 18634526 -66803954 + L1MB3 LINE L1 5323 6050 -133 939 219 31 25 chr17 18634529 18634562 -66803918 + AluJo SINE Alu 85 116 -196 198 0 0 0 chr17 18634562 18634584 -66803896 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2103 120 23 16 chr17 18634587 18634896 -66803584 + AluSx SINE Alu 1 311 -1 939 219 31 25 chr17 18634896 18635054 -66803426 + AluJo SINE Alu 117 281 -31 3131 224 51 46 chr17 18635067 18636230 -66802250 + L1MEc LINE L1 2597 3764 -2451 1248 154 0 62 chr17 18636232 18636270 -66802210 + AluJo SINE Alu 97 136 -176 2320 105 3 6 chr17 18636270 18636583 -66801897 + AluSx SINE Alu 1 312 0 2382 67 14 14 chr17 18636589 18636886 -66801594 + AluY SINE Alu 3 299 -12 1248 154 0 62 chr17 18636886 18637067 -66801413 + AluJo SINE Alu 141 309 -3 1249 207 43 7 chr17 18637068 18637348 -66801132 + L1MB7 LINE L1 5730 6019 -165 1121 153 118 25 chr17 18637349 18637539 -66800941 + AluJb SINE Alu 87 299 -13 2556 77 0 0 chr17 18637539 18637849 -66800631 + AluY SINE Alu 1 310 -1 1121 153 118 25 chr17 18637849 18637861 -66800619 + AluJb SINE Alu 299 308 -4 262 212 256 15 chr17 18637862 18637999 -66800481 + L1MB8 LINE L1 5988 6157 -21 1576 238 22 24 chr17 18638136 18638195 -66800285 + L1ME2 LINE L1 2497 2555 -3591 2139 122 3 10 chr17 18638195 18638490 -66799990 + AluSx SINE Alu 1 293 -19 1576 238 22 24 chr17 18638490 18638889 -66799591 + L1ME2 LINE L1 2555 2954 -3192 2079 115 3 3 chr17 18638909 18639197 -66799283 + AluSx SINE Alu 1 288 -24 23 0 0 0 chr17 18639197 18639220 -66799260 + AT_rich Low_complexity Low_complexity 1 23 0 2222 196 20 32 chr17 18639270 18639547 -66798933 + L1ME2 LINE L1 5330 5600 -566 2541 88 0 0 chr17 18639547 18639854 -66798626 + AluY SINE Alu 1 307 -4 2222 196 20 32 chr17 18639854 18640072 -66798408 + L1ME2 LINE L1 5600 5819 -347 2195 120 0 3 chr17 18640077 18640368 -66798112 + AluSx SINE Alu 1 290 -22 1071 169 10 33 chr17 18640328 18640372 -66798108 + AluJo SINE Alu 85 128 -184 2250 89 0 67 chr17 18640372 18640699 -66797781 + AluSg SINE Alu 1 305 -5 1071 169 10 33 chr17 18640699 18640876 -66797604 + AluJo SINE Alu 128 306 -6 664 238 29 79 chr17 18640889 18641229 -66797251 + L1ME2 LINE L1 5841 6163 -1 1928 107 7 11 chr17 18641255 18641527 -66796953 + AluSx SINE Alu 35 305 -7 1283 178 108 37 chr17 18641549 18641848 -66796632 + AluJo SINE Alu 1 318 0 307 287 74 8 chr17 18641926 18642048 -66796432 + MLT1K LTR MaLR 459 588 0 2230 111 14 0 chr17 18642142 18642439 -66796041 + AluSg SINE Alu 1 301 -9 302 260 58 0 chr17 18642631 18642735 -66795745 + MIR3 SINE MIR 57 166 -42 629 212 0 40 chr17 18643082 18643233 -66795247 + FRAM SINE Alu 1 145 -31 189 74 0 0 chr17 18643234 18643261 -66795219 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 393 274 51 17 chr17 18643266 18643383 -66795097 + MIR SINE MIR 30 149 -80 358 158 134 0 chr17 18643387 18643469 -66795011 - MLT1I LTR MaLR 0 409 317 806 107 0 0 chr17 18643498 18643601 -66794879 + AluSg/x SINE Alu 189 291 -18 2171 79 4 4 chr17 18643607 18643874 -66794606 + AluSp SINE Alu 14 280 -33 2187 103 0 39 chr17 18643884 18644194 -66794286 + AluSc SINE Alu 11 308 -1 456 293 21 4 chr17 18644211 18644384 -66794096 + MLT1E LTR MaLR 17 195 -372 216 213 0 0 chr17 18644385 18644446 -66794034 + C-rich Low_complexity Low_complexity 5 65 0 1081 245 52 42 chr17 18644452 18644811 -66793669 + MLT1E LTR MaLR 193 569 -24 182 162 54 0 chr17 18644817 18644891 -66793589 + (TA)n Simple_repeat Simple_repeat 1 78 0 372 286 0 0 chr17 18644989 18645087 -66793393 - MLT1I LTR MaLR -231 178 81 1067 133 0 0 chr17 18645192 18645335 -66793145 + AluSq/x SINE Alu 1 143 -170 2671 45 0 10 chr17 18645335 18645648 -66792832 + AluY SINE Alu 1 310 -1 2177 112 0 14 chr17 18645650 18645958 -66792522 + AluSx SINE Alu 1 304 0 719 281 188 15 chr17 18646155 18646553 -66791927 + L2 LINE L2 2846 3312 -1 2364 83 0 17 chr17 18646673 18646974 -66791506 + AluY SINE Alu 1 296 -15 2222 116 7 0 chr17 18646985 18647279 -66791201 + AluSx SINE Alu 1 296 -16 2629 61 0 0 chr17 18647279 18647589 -66790891 + AluY SINE Alu 1 310 -1 254 224 45 0 chr17 18647748 18647815 -66790665 - MER5A DNA MER1_type -5 184 115 1158 157 0 6 chr17 18647816 18647988 -66790492 - AluSg/x SINE Alu -17 293 123 503 273 0 8 chr17 18648005 18648126 -66790354 - MER5A DNA MER1_type -69 120 1 1386 167 0 14 chr17 18648471 18648686 -66789794 - AluJo SINE Alu -30 282 71 2095 138 3 0 chr17 18648825 18649130 -66789350 - AluSg SINE Alu -4 306 1 452 298 128 49 chr17 18649131 18649569 -66788911 + L2 LINE L2 2701 3194 -78 1830 151 3 11 chr17 18649569 18649878 -66788602 - AluSx SINE Alu 0 307 1 452 298 128 49 chr17 18649878 18649959 -66788521 + L2 LINE L2 3194 3267 -5 188 317 69 30 chr17 18649977 18650078 -66788402 - L2 LINE L2 -19 3253 3149 2861 130 62 42 chr17 18650096 18650690 -66787790 - MER4B LTR ERV1 -4 606 1 524 259 17 2 chr17 18650889 18651073 -66787407 - MIR SINE MIR -6 256 29 2010 77 0 49 chr17 18652136 18652275 -66786205 - AluSq SINE Alu -40 273 154 2193 78 39 0 chr17 18652275 18652559 -66785921 - AluSx SINE Alu -17 295 1 2010 77 0 49 chr17 18652559 18652706 -66785774 - AluSq SINE Alu -159 154 1 411 256 120 8 chr17 18652843 18652976 -66785504 + MIR SINE MIR 104 251 -11 199 282 14 28 chr17 18653020 18653091 -66785389 + MIR SINE MIR 81 150 -58 181 306 41 0 chr17 18653329 18653378 -66785102 + MIR SINE MIR 91 141 -67 2481 81 3 0 chr17 18653515 18653822 -66784658 + AluSx SINE Alu 1 308 -4 2012 109 0 63 chr17 18654523 18654825 -66783655 - AluSg SINE Alu -15 295 13 578 136 0 0 chr17 18654827 18654915 -66783565 - AluS SINE Alu -224 88 1 2059 132 3 10 chr17 18654969 18655273 -66783207 + AluJo SINE Alu 1 302 -10 229 330 150 21 chr17 18655631 18655862 -66782618 - L2 LINE L2 -431 2883 2593 1820 106 4 16 chr17 18655862 18656116 -66782364 + AluSg SINE Alu 44 294 -16 229 330 150 21 chr17 18656116 18656223 -66782257 - L2 LINE L2 -721 2593 2501 255 325 53 18 chr17 18656296 18656410 -66782070 + MIR SINE MIR 32 149 -59 2307 100 7 3 chr17 18656717 18657027 -66781453 - AluY SINE Alu 0 311 1 28 0 0 0 chr17 18657032 18657060 -66781420 + AT_rich Low_complexity Low_complexity 1 28 0 552 78 26 0 chr17 18657214 18657291 -66781189 + AluSg/x SINE Alu 216 294 -18 2041 123 20 0 chr17 18657302 18657594 -66780886 + AluSx SINE Alu 1 298 -14 2334 106 0 7 chr17 18657966 18658267 -66780213 + AluSg SINE Alu 1 299 -11 1514 156 118 15 chr17 18658665 18658822 -66779658 - AluJo SINE Alu -21 291 152 1851 178 0 13 chr17 18658822 18659120 -66779360 - AluJb SINE Alu -18 294 1 1514 156 118 15 chr17 18659120 18659225 -66779255 - AluJo SINE Alu -160 152 2 645 204 188 6 chr17 18659274 18659450 -66779030 + MER3 DNA MER1_type 1 208 -1 1696 204 21 0 chr17 18659774 18660063 -66778417 - AluJo SINE Alu -17 295 1 2247 106 3 0 chr17 18660256 18660548 -66777932 - AluSx SINE Alu -19 293 1 902 121 0 57 chr17 18660548 18660689 -66777791 - AluSg SINE Alu -177 133 1 302 326 45 0 chr17 18660769 18660858 -66777622 + L1MC4 LINE L1 6610 6702 -1340 2181 72 28 21 chr17 18660860 18661151 -66777329 - AluSp SINE Alu -20 293 1 1921 150 17 10 chr17 18661240 18661540 -66776940 - AluJo SINE Alu -10 302 1 840 236 50 117 chr17 18662242 18662520 -66775960 - L1MC4 LINE L1 0 8042 7812 2187 95 7 7 chr17 18662520 18662814 -66775666 - AluSx SINE Alu -18 294 1 840 236 50 117 chr17 18662814 18663039 -66775441 - L1MC4 LINE L1 -230 7812 7573 1950 157 0 22 chr17 18663070 18663242 -66775238 - AluSx SINE Alu -7 305 142 2103 94 0 0 chr17 18663242 18663507 -66774973 - AluSx SINE Alu -8 304 40 1950 157 0 22 chr17 18663507 18663646 -66774834 - AluSx SINE Alu -170 142 1 2250 102 0 3 chr17 18663839 18664149 -66774331 - AluSc SINE Alu 0 310 2 2760 45 0 0 chr17 18665499 18665807 -66772673 + AluY SINE Alu 1 308 -3 1131 190 146 13 chr17 18666154 18666470 -66772010 - L1MB7 LINE L1 0 6184 5827 686 81 61 0 chr17 18666571 18666670 -66771810 + L1MB3 LINE L1 5880 5984 -199 192 366 32 8 chr17 18667676 18667799 -66770681 + L3 LINE CR1 1251 1376 -201 225 0 0 0 chr17 18668740 18668765 -66769715 + (T)n Simple_repeat Simple_repeat 1 25 0 5073 232 71 22 chr17 18668849 18669614 -66768866 - L1MC3 LINE L1 -2 7783 7057 2105 156 26 21 chr17 18669614 18670044 -66768436 - MSTB1 LTR MaLR 0 432 1 5073 232 71 22 chr17 18670044 18670710 -66767770 - L1MC3 LINE L1 -728 7057 6281 2596 74 0 0 chr17 18670875 18671184 -66767296 + AluY SINE Alu 1 309 -2 4349 105 24 6 chr17 18671196 18671870 -66766610 + L1PA13 LINE L1 5478 6163 0 278 341 41 8 chr17 18672002 18672125 -66766355 - MIR SINE MIR -34 228 102 1153 230 20 8 chr17 18672165 18672413 -66766067 + Tigger3(Golem) DNA MER2_type 2788 3038 0 269 284 0 27 chr17 18672413 18672487 -66765993 - MIR SINE MIR -160 102 31 203 310 194 8 chr17 18673875 18674004 -66764476 - MIR SINE MIR -5 257 105 367 252 58 0 chr17 18675599 18675702 -66762778 + MIR SINE MIR 47 155 -107 2313 171 44 26 chr17 18675712 18676209 -66762271 + L1MB5 LINE L1 5545 6050 -124 30 59 0 0 chr17 18677437 18677488 -66760992 + AT_rich Low_complexity Low_complexity 1 51 0 541 250 31 16 chr17 18677771 18677973 -66760507 + L1MB7 LINE L1 5904 6129 -53 2523 189 80 37 chr17 18678934 18679364 -66759116 + L1MB4 LINE L1 4969 5379 -801 1659 142 24 45 chr17 18679364 18679652 -66758828 + AluJo SINE Alu 30 311 -1 2523 189 80 37 chr17 18679652 18680114 -66758366 + L1MB4 LINE L1 5379 5885 -295 1424 145 0 23 chr17 18680298 18680519 -66757961 - AluSg/x SINE Alu -15 295 80 1311 54 109 11 chr17 18680518 18680702 -66757778 - AluY SINE Alu -16 295 94 * 2140 109 3 23 chr17 18682488 18682812 -66755668 + AluSx SINE Alu 2 312 0 415 244 87 23 chr17 18684610 18684782 -66753698 + MER53 DNA DNA 3 185 -4 21 0 0 0 chr17 18686980 18687001 -66751479 + GC_rich Low_complexity Low_complexity 1 21 0 333 158 33 87 chr17 18687208 18687392 -66751088 + (CACGT)n Simple_repeat Simple_repeat 4 177 0 1027 186 48 8 chr17 18688107 18688355 -66750125 + L1MD3 LINE L1 7736 7993 -2 1026 218 128 26 chr17 18688343 18688551 -66749929 + L1ME1 LINE L1 5585 5770 -396 * 1710 168 7 45 chr17 18688551 18688860 -66749620 + AluJb SINE Alu 1 297 -15 1026 218 128 26 chr17 18688860 18689100 -66749380 + L1ME1 LINE L1 5770 6098 -68 250 215 156 30 chr17 18689015 18689150 -66749330 + L1MA10 LINE L1 6169 6320 -14 * 2404 78 0 0 chr17 18689151 18689447 -66749033 - AluSg1 SINE Alu -13 296 1 2261 99 3 20 chr17 18689447 18689750 -66748730 - AluY SINE Alu -12 299 2 324 235 34 67 chr17 18689774 18689893 -66748587 + MIR3 SINE MIR 42 156 -52 929 117 7 0 chr17 18690072 18690217 -66748263 - L1MA3 LINE L1 0 6305 6160 237 83 0 0 chr17 18690218 18690254 -66748226 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2335 67 0 11 chr17 18690254 18690538 -66747942 - AluY SINE Alu -30 281 1 2141 104 45 0 chr17 18690541 18690830 -66747650 - AluSx SINE Alu -10 302 1 2031 110 3 10 chr17 18690831 18691139 -66747341 - AluSq SINE Alu -7 306 1 245 182 23 57 chr17 18691140 18691228 -66747252 + L1MA9 LINE L1 6209 6293 -19 1537 75 5 28 chr17 18691271 18691483 -66746997 - AluJb SINE Alu -105 207 1 2014 102 13 13 chr17 18691775 18692078 -66746402 + AluSg SINE Alu 1 303 -7 1461 219 0 0 chr17 18692672 18692969 -66745511 - AluY SINE Alu -14 297 1 623 126 0 21 chr17 18693102 18693197 -66745283 - AluS SINE Alu -215 97 5 1146 226 0 25 chr17 18693213 18693487 -66744993 - L1M4 LINE L1 -1114 5032 4766 1980 138 0 3 chr17 18693487 18693785 -66744695 - AluSx SINE Alu -15 297 1 236 252 204 14 chr17 18693811 18693958 -66744522 - MER112 DNA MER1_type -48 212 38 262 269 125 0 chr17 18694031 18694135 -66744345 - Charlie2 DNA MER1_type -2429 353 237 2023 103 45 3 chr17 18694222 18694343 -66744137 + AluSx SINE Alu 1 116 -196 243 0 0 0 chr17 18694343 18694370 -66744110 + (CA)n Simple_repeat Simple_repeat 2 28 0 2023 103 45 3 chr17 18694370 18694539 -66743941 + AluSx SINE Alu 116 303 -9 1726 177 3 0 chr17 18694581 18694875 -66743605 + AluJo SINE Alu 15 309 -3 1951 93 36 4 chr17 18694875 18695155 -66743325 + AluY SINE Alu 1 289 -22 2271 92 0 3 chr17 18698447 18698751 -66739729 + AluY SINE Alu 1 303 -8 1561 152 0 22 chr17 18700364 18700634 -66737846 + AluSx SINE Alu 11 274 -38 180 97 0 0 chr17 18700644 18700675 -66737805 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2112 99 3 13 chr17 18700863 18701167 -66737313 + AluSq SINE Alu 12 312 -1 1089 177 4 65 chr17 18701177 18701257 -66737223 - AluJb SINE Alu -88 224 141 2165 87 0 10 chr17 18701257 18701556 -66736924 - AluY SINE Alu -6 305 10 1089 177 4 65 chr17 18701556 18701707 -66736773 - AluJb SINE Alu -171 141 7 21 0 0 0 chr17 18703670 18703691 -66734789 + AT_rich Low_complexity Low_complexity 1 21 0 1942 121 7 17 chr17 18703693 18703990 -66734490 - AluSx SINE Alu -18 294 1 1235 195 0 111 chr17 18703992 18704326 -66734154 - AluJb SINE Alu -4 298 2 1965 128 3 0 chr17 18704348 18704638 -66733842 - AluSx SINE Alu -1 311 21 239 172 86 0 chr17 18704682 18704740 -66733740 + MER3 DNA MER1_type 144 206 -3 660 203 0 8 chr17 18705226 18705349 -66733131 - L1MB3 LINE L1 -8 6175 6054 928 221 14 14 chr17 18705352 18705565 -66732915 - L1MB3 LINE L1 -176 6007 5795 364 347 57 11 chr17 18705855 18706120 -66732360 + L2 LINE L2 2579 2855 -459 1898 100 11 7 chr17 18707192 18707493 -66730987 - AluSq SINE Alu 0 312 11 379 329 37 6 chr17 18708262 18708426 -66730054 + MIR SINE MIR 89 257 -5 1483 171 29 41 chr17 18709048 18709229 -66729251 - AluJo SINE Alu -1 311 134 1666 151 0 33 chr17 18709229 18709534 -66728946 - AluSg SINE Alu -11 299 5 1483 171 29 41 chr17 18709534 18709667 -66728813 - AluJo SINE Alu -178 134 1 1848 130 0 43 chr17 18710140 18710463 -66728017 + AluSx SINE Alu 1 309 -3 320 297 128 0 chr17 18711451 18711599 -66726881 - MLT1I LTR MaLR -15 394 228 2145 101 3 10 chr17 18711612 18711919 -66726561 + AluSx SINE Alu 1 305 -7 1453 100 0 19 chr17 18712747 18712957 -66725523 - AluSq SINE Alu -103 210 5 248 311 114 21 chr17 18713201 18713394 -66725086 - L1MC5 LINE L1 -492 7469 7259 267 286 57 29 chr17 18714598 18714703 -66723777 + MIR SINE MIR 122 229 -33 1640 148 7 11 chr17 18714703 18714986 -66723494 + AluJo SINE Alu 13 294 -18 709 186 0 131 chr17 18714986 18715207 -66723273 + L1PA16 LINE L1 5964 6155 -11 1914 82 0 32 chr17 18715209 18715488 -66722992 + AluSg SINE Alu 41 310 0 2004 86 16 23 chr17 18716373 18716676 -66721804 + AluSg SINE Alu 1 301 -9 297 242 44 81 chr17 18717246 18717395 -66721085 + L1MC4 LINE L1 7458 7675 -207 390 270 61 17 chr17 18719413 18719528 -66718952 + MIR SINE MIR 93 212 -50 2265 100 6 0 chr17 18720461 18720772 -66717708 - AluSq SINE Alu 0 313 1 2016 104 17 0 chr17 18722301 18722589 -66715891 - AluSq SINE Alu -20 293 1 874 141 0 0 chr17 18724375 18724503 -66713977 - AluJb SINE Alu -27 285 158 240 122 0 0 chr17 18725482 18725523 -66712957 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 183 205 0 0 chr17 18726079 18726118 -66712362 + (TAA)n Simple_repeat Simple_repeat 1 39 0 219 69 0 0 chr17 18726327 18726356 -66712124 + (CCGGA)n Simple_repeat Simple_repeat 5 33 0 2434 40 0 3 chr17 18727581 18727878 -66710602 + AluY SINE Alu 1 296 -15 2055 87 4 11 chr17 18731635 18731912 -66706568 - AluSg SINE Alu -35 275 1 1048 75 0 0 chr17 18731912 18732045 -66706435 - AluSg SINE Alu -177 133 1 1619 161 3 47 chr17 18732049 18732139 -66706341 - 7SLRNA srpRNA srpRNA -12 308 216 1848 157 3 13 chr17 18732139 18732445 -66706035 - AluJb SINE Alu -9 303 1 1619 161 3 47 chr17 18732445 18732652 -66705828 - 7SLRNA srpRNA srpRNA -104 216 24 1883 138 20 7 chr17 18732856 18733153 -66705327 + AluJb SINE Alu 1 301 -11 250 71 0 0 chr17 18736262 18736304 -66702176 - AluY SINE Alu -2 299 258 1691 78 5 0 chr17 18736304 18736522 -66701958 - AluY SINE Alu -90 221 3 35 0 0 0 chr17 18740860 18740895 -66697585 + AT_rich Low_complexity Low_complexity 1 35 0 713 126 0 0 chr17 18740893 18740996 -66697484 - U6 snRNA snRNA -4 103 1 1168 126 135 0 chr17 18748174 18748381 -66690099 - MER46A DNA MER2_type 0 236 2 186 301 140 44 chr17 18748772 18748908 -66689572 - MIR3 SINE MIR -23 185 37 192 319 195 26 chr17 18748975 18749088 -66689392 + L2 LINE L2 3151 3282 -31 270 303 18 18 chr17 18749258 18749367 -66689113 + MIR SINE MIR 49 157 -105 2358 95 3 0 chr17 18750697 18750992 -66687488 - AluSc SINE Alu -13 296 1 272 269 67 10 chr17 18751101 18751205 -66687275 + Tigger8 DNA MER2_type 232 341 -325 186 217 22 0 chr17 18751936 18751982 -66686498 + L2 LINE L2 3136 3182 -90 2384 81 24 0 chr17 18753224 18753519 -66684961 - AluSp SINE Alu -11 302 1 2193 114 31 0 chr17 18755528 18755818 -66682662 + AluSx SINE Alu 1 299 -13 182 246 188 0 chr17 18757290 18757359 -66681121 - L2 LINE L2 -668 2646 2565 2321 102 3 0 chr17 18757654 18757948 -66680532 + AluSx SINE Alu 3 297 -15 942 175 113 5 chr17 18758023 18758217 -66680263 + MER46A DNA MER2_type 14 228 -8 218 336 44 26 chr17 18758761 18758874 -66679606 + MIR3 SINE MIR 51 165 -43 2586 76 0 0 chr17 18759540 18759844 -66678636 + AluSp SINE Alu 3 306 -7 1943 117 26 39 chr17 18759851 18760048 -66678432 + AluSq SINE Alu 1 194 -119 2490 75 0 0 chr17 18760048 18760342 -66678138 - AluY SINE Alu -17 294 1 1943 117 26 39 chr17 18760342 18760451 -66678029 + AluSq SINE Alu 194 303 -10 1658 148 0 123 chr17 18760453 18760608 -66677872 + AluJo SINE Alu 1 91 -221 2490 65 0 3 chr17 18760608 18760901 -66677579 - AluY SINE Alu -19 292 1 1658 148 0 123 chr17 18760901 18761096 -66677384 + AluJo SINE Alu 91 308 -4 769 165 0 0 chr17 18761638 18761771 -66676709 - FLAM_C SINE Alu 0 133 1 2268 103 0 10 chr17 18761771 18762108 -66676372 - AluSc SINE Alu 0 309 1 2258 115 6 6 chr17 18762519 18762831 -66675649 - AluSp SINE Alu -1 312 1 1917 163 3 0 chr17 18763440 18763741 -66674739 - AluJb SINE Alu -10 302 1 1291 117 0 0 chr17 18764882 18765045 -66673435 + AluSg/x SINE Alu 126 288 -22 227 207 35 17 chr17 18765090 18765148 -66673332 - MLT1J LTR MaLR -112 399 341 2718 51 0 0 chr17 18765527 18765838 -66672642 - AluY SINE Alu 0 311 1 2332 115 0 0 chr17 18765968 18766272 -66672208 - AluSx SINE Alu -8 304 1 271 220 0 0 chr17 18766273 18766323 -66672157 - AluJo SINE Alu -168 134 85 1529 184 57 21 chr17 18766463 18766745 -66671735 + AluJo SINE Alu 1 292 -20 21 71 0 0 chr17 18766983 18767025 -66671455 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr17 18767088 18767110 -66671370 + AT_rich Low_complexity Low_complexity 1 22 0 2382 86 0 32 chr17 18767152 18767466 -66671014 - AluY SINE Alu -7 304 1 1956 145 3 0 chr17 18767472 18767804 -66670676 - AluSx SINE Alu 0 333 1 1226 114 0 45 chr17 18767866 18768042 -66670438 - AluSg/x SINE Alu -11 299 132 2259 117 3 7 chr17 18768042 18768351 -66670129 - AluSc SINE Alu -1 308 1 2416 91 7 3 chr17 18768533 18768842 -66669638 - AluSg SINE Alu 0 310 1 1732 169 20 17 chr17 18769051 18769347 -66669133 - AluJb SINE Alu -15 297 1 1075 131 0 0 chr17 18769356 18769509 -66668971 - AluSg/x SINE Alu -5 305 153 216 0 0 0 chr17 18770124 18770148 -66668332 + (ATTG)n Simple_repeat Simple_repeat 4 27 0 1621 194 0 14 chr17 18770148 18770432 -66668048 - AluJo SINE Alu -32 280 1 921 179 45 6 chr17 18770761 18770940 -66667540 + MER20 DNA MER1_type 1 186 -33 298 208 14 0 chr17 18771004 18771076 -66667404 + MER20 DNA MER1_type 146 218 -1 1007 226 107 76 chr17 18771123 18771292 -66667188 - L1ME3A LINE L1 -10 6160 5998 2380 51 58 0 chr17 18771292 18771568 -66666912 - AluY SINE Alu -19 292 1 1007 226 107 76 chr17 18771568 18771781 -66666699 - L1ME3A LINE L1 -172 5998 5793 2217 98 24 10 chr17 18771781 18772076 -66666404 + AluSq SINE Alu 1 299 -14 2329 96 0 13 chr17 18772078 18772380 -66666100 + AluY SINE Alu 1 298 -13 1007 226 107 76 chr17 18772380 18772440 -66666040 - L1ME3A LINE L1 -377 5793 5700 1522 124 0 5 chr17 18772900 18773117 -66665363 + AluSg/x SINE Alu 83 298 -12 319 305 38 19 chr17 18773154 18773167 -66665313 + L2 LINE L2 3193 3204 -109 1548 131 40 44 chr17 18773167 18773444 -66665036 + L1MB5 LINE L1 5855 6133 -41 2092 113 7 14 chr17 18773444 18773580 -66664900 + AluSx SINE Alu 1 136 -173 2386 100 3 0 chr17 18773580 18773881 -66664599 + AluSp SINE Alu 1 302 -11 2092 113 7 14 chr17 18773881 18774055 -66664425 + AluSx SINE Alu 136 309 0 1548 131 40 44 chr17 18774055 18774097 -66664383 + L1MB5 LINE L1 6133 6174 0 319 305 38 19 chr17 18774097 18774188 -66664292 + L2 LINE L2 3204 3299 -14 644 182 16 0 chr17 18774605 18774726 -66663754 + AluSg/x SINE Alu 189 311 -1 2134 114 3 14 chr17 18774755 18775052 -66663428 + AluSx SINE Alu 1 294 -18 691 224 152 19 chr17 18775459 18775723 -66662757 + MER46C DNA MER2_type 39 337 -1 703 115 31 46 chr17 18776750 18776880 -66661600 + FLAM_C SINE Alu 4 131 -2 22 0 0 0 chr17 18776907 18776929 -66661551 + AT_rich Low_complexity Low_complexity 1 22 0 1158 170 50 9 chr17 18776985 18777203 -66661277 - AluJb SINE Alu -8 304 78 2147 116 13 3 chr17 18777565 18777867 -66660613 + AluSq SINE Alu 1 305 -8 255 237 0 140 chr17 18777943 18777988 -66660492 - MER58A DNA MER1_type -257 84 57 2444 92 7 0 chr17 18777988 18778292 -66660188 + AluSq SINE Alu 1 306 -7 255 237 0 140 chr17 18778292 18778339 -66660141 - MER58A DNA MER1_type -284 57 5 251 227 76 0 chr17 18778777 18778843 -66659637 + LTR50 LTR ERVL 25 95 -700 377 252 30 23 chr17 18779031 18779142 -66659338 + LTR50 LTR ERVL 540 654 -141 1952 138 10 3 chr17 18779142 18779433 -66659047 - AluSx SINE Alu -19 293 1 377 252 30 23 chr17 18779433 18779452 -66659028 + LTR50 LTR ERVL 654 671 -124 2509 70 0 3 chr17 18780113 18780411 -66658069 - AluY SINE Alu -14 297 1 1129 139 57 53 chr17 18781351 18781560 -66656920 - THE1B LTR MaLR 0 364 155 2025 127 0 14 chr17 18781560 18781877 -66656603 + AluY SINE Alu 1 313 0 2250 85 54 0 chr17 18782465 18782760 -66655720 + AluY SINE Alu 1 311 0 2202 90 38 0 chr17 18782777 18783066 -66655414 + AluSg SINE Alu 1 300 -10 632 60 0 0 chr17 18784296 18784401 -66654079 + AluSg/x SINE Alu 196 300 0 2300 71 7 17 chr17 18784617 18784914 -66653566 - AluSc SINE Alu -15 294 1 2321 57 3 27 chr17 18785228 18785528 -66652952 + AluSq SINE Alu 1 293 -20 1349 156 3 122 chr17 18787874 18788222 -66650258 - AluJb SINE Alu 0 310 1 2436 70 7 3 chr17 18788222 18788521 -66649959 - AluY SINE Alu -10 301 1 608 51 0 0 chr17 18788521 18788599 -66649881 - AluSg SINE Alu -176 134 57 1335 132 5 0 chr17 18788599 18788788 -66649692 - AluSx SINE Alu -121 191 2 2224 124 0 9 chr17 18788836 18789151 -66649329 + AluSx SINE Alu 1 312 0 2412 113 3 0 chr17 18789328 18789639 -66648841 + AluSq SINE Alu 1 312 -1 2472 76 0 7 chr17 18789727 18790031 -66648449 - AluY SINE Alu -9 302 1 935 123 0 36 chr17 18790032 18790170 -66648310 - AluJo SINE Alu -173 139 7 2042 119 7 10 chr17 18792138 18792432 -66646048 - AluSx SINE Alu -19 293 1 1279 195 0 108 chr17 18792434 18792767 -66645713 - AluJb SINE Alu -4 298 2 203 61 30 0 chr17 18792773 18792806 -66645674 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1934 119 4 0 chr17 18792809 18793078 -66645402 - AluSx SINE Alu -22 290 21 21 0 0 0 chr17 18793122 18793143 -66645337 + AT_rich Low_complexity Low_complexity 1 21 0 680 203 0 8 chr17 18793662 18793785 -66644695 - L1MB3 LINE L1 -8 6175 6054 848 224 24 9 chr17 18793788 18793998 -66644482 - L1MB3 LINE L1 -176 6007 5795 377 351 49 30 chr17 18794242 18794547 -66643933 + L2 LINE L2 2545 2855 -459 2047 104 11 0 chr17 18795604 18795912 -66642568 - AluSq SINE Alu 0 311 1 403 335 37 6 chr17 18796650 18796814 -66641666 + MIR SINE MIR 89 257 -5 1635 174 29 29 chr17 18797434 18797614 -66640866 - AluJo SINE Alu -1 311 129 1955 132 7 7 chr17 18797614 18797909 -66640571 - AluSg SINE Alu -11 299 5 1635 174 29 29 chr17 18797909 18798039 -66640441 - AluJo SINE Alu -182 130 1 2065 122 3 10 chr17 18798506 18798817 -66639663 + AluSx SINE Alu 1 309 -3 290 310 129 0 chr17 18799783 18799938 -66638542 - MLT1I LTR MaLR -7 402 228 2276 102 3 0 chr17 18799950 18800254 -66638226 + AluSx SINE Alu 1 305 -7 1645 94 0 0 chr17 18801075 18801288 -66637192 - AluSq SINE Alu -100 213 1 251 312 122 5 chr17 18801524 18801713 -66636767 - L1MC5 LINE L1 -492 7469 7259 419 253 27 47 chr17 18804724 18804874 -66633606 + MER77 LTR ERV1 54 200 -405 563 274 135 41 chr17 18805032 18805339 -66633141 + MER77 LTR ERV1 303 711 -62 1546 190 60 3 chr17 18805339 18805459 -66633021 + AluJo SINE Alu 1 113 -199 348 24 0 0 chr17 18805459 18805500 -66632980 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1546 190 60 3 chr17 18805500 18805663 -66632817 + AluJo SINE Alu 113 300 -12 563 274 135 41 chr17 18805663 18805728 -66632752 + MER77 LTR ERV1 711 768 -5 198 0 0 0 chr17 18805790 18805812 -66632668 + (T)n Simple_repeat Simple_repeat 1 22 0 3379 202 128 60 chr17 18806587 18807003 -66631477 - Charlie1 DNA MER1_type 0 2761 2375 2230 99 3 0 chr17 18807003 18807296 -66631184 - AluSx SINE Alu -16 296 3 3379 202 128 60 chr17 18807296 18808131 -66630349 - Charlie1 DNA MER1_type -386 2375 1425 397 227 52 10 chr17 18808135 18808232 -66630248 - Charlie1 DNA MER1_type -2647 114 14 335 333 56 28 chr17 18808391 18808571 -66629909 - L1ME LINE L1 -345 5776 5592 2368 68 0 0 chr17 18811641 18811934 -66626546 - AluSc SINE Alu -16 293 1 212 267 67 13 chr17 18813058 18813133 -66625347 - MIR SINE MIR -90 118 40 294 308 79 26 chr17 18816466 18816672 -66621808 + MIR SINE MIR 24 241 -21 1771 132 0 0 chr17 18818854 18819097 -66619383 - AluSx SINE Alu -69 243 1 315 0 0 0 chr17 18820046 18820081 -66618399 + (CTG)n Simple_repeat Simple_repeat 1 35 0 1940 156 99 3 chr17 18820530 18820863 -66617617 + MLT1A1 LTR MaLR 1 365 0 221 325 0 0 chr17 18820885 18820965 -66617515 + (CA)n Simple_repeat Simple_repeat 1 80 0 187 387 28 9 chr17 18823922 18824028 -66614452 - MIR SINE MIR -71 191 84 275 324 88 15 chr17 18825311 18825447 -66613033 + MIR3 SINE MIR 18 163 -45 260 244 0 8 chr17 18825869 18825999 -66612481 + GA-rich Low_complexity Low_complexity 1 128 0 279 240 120 0 chr17 18831954 18832054 -66606426 - Charlie7 DNA MER1_type -2500 112 1 307 91 0 0 chr17 18832225 18832269 -66606211 + MIR SINE MIR 104 147 -61 1982 96 0 119 chr17 18832419 18832772 -66605708 - AluSx SINE Alu -1 311 1 2463 192 94 16 chr17 18832781 18833395 -66605085 - L1MB7 LINE L1 0 6184 5523 1816 129 0 23 chr17 18833635 18833937 -66604543 + AluSg SINE Alu 1 295 -15 3694 183 59 24 chr17 18833937 18834222 -66604258 + L1MB7 LINE L1 4766 5039 -1145 1938 119 39 3 chr17 18834222 18834507 -66603973 + AluSx SINE Alu 1 295 -17 3694 183 59 24 chr17 18834507 18834704 -66603776 + L1MB7 LINE L1 5039 5228 -956 1426 150 82 75 chr17 18834704 18834998 -66603482 - AluJo SINE Alu -16 296 1 3694 183 59 24 chr17 18834998 18835893 -66602587 + L1MB7 LINE L1 5228 6184 0 2490 58 0 6 chr17 18836243 18836554 -66601926 - AluY SINE Alu -2 309 1 2257 94 0 0 chr17 18837020 18837317 -66601163 + AluSg SINE Alu 1 297 -13 1844 125 0 39 chr17 18837347 18837659 -66600821 + AluSp SINE Alu 1 300 -13 497 66 0 0 chr17 18888087 18888148 -66550332 - Alu SINE Alu -256 62 2 464 239 141 27 chr17 18888339 18888523 -66549957 + L2 LINE L2 3098 3302 -11 309 230 18 97 chr17 18888532 18888645 -66549835 - MIR SINE MIR -147 115 12 659 237 158 28 chr17 18889363 18889585 -66548895 - MIR SINE MIR -12 250 1 188 57 0 57 chr17 18889628 18889663 -66548817 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 2373 93 0 10 chr17 18889766 18890068 -66548412 + AluSq SINE Alu 1 299 -14 591 255 32 0 chr17 18890447 18890635 -66547845 + L1M4 LINE L1 2840 3033 -3113 836 209 22 44 chr17 18891360 18891390 -66547090 - L1 LINE L1 -2404 3742 3713 5245 194 14 0 chr17 18891390 18892568 -66545912 - L1PA16 LINE L1 -1 6165 4981 836 209 22 44 chr17 18892568 18892762 -66545718 - L1 LINE L1 -2433 3713 3523 1884 167 0 0 chr17 18892879 18893185 -66545295 + AluSx SINE Alu 7 312 0 26 0 0 0 chr17 18893185 18893211 -66545269 + AT_rich Low_complexity Low_complexity 1 26 0 227 179 0 0 chr17 18893624 18893663 -66544817 - MLT1H LTR MaLR -2 547 509 613 244 81 53 chr17 18893699 18893945 -66544535 - MLT1H LTR MaLR -218 331 79 299 292 67 42 chr17 18894226 18894346 -66544134 - MIR SINE MIR -119 143 21 332 303 184 0 chr17 18895245 18895397 -66543083 + MIR SINE MIR 22 201 -61 439 289 37 0 chr17 18895608 18895743 -66542737 - LTR52 LTR ERVL -3 418 279 403 211 92 14 chr17 18896324 18896466 -66542014 - MLT1C LTR MaLR -203 264 112 247 286 117 62 chr17 18896497 18896805 -66541675 - MLT1H LTR MaLR -102 447 123 217 301 133 0 chr17 18897176 18897289 -66541191 + MIR3 SINE MIR 70 197 -11 2550 212 55 9 chr17 18897473 18898054 -66540426 + L1MB7 LINE L1 5559 6166 -18 228 286 66 22 chr17 18898320 18898411 -66540069 - MER94 DNA DNA 0 134 40 2046 184 6 3 chr17 18898413 18898756 -66539724 - MER2 DNA MER2_type 0 344 1 720 204 10 3 chr17 18900130 18900429 -66538051 + GA-rich Low_complexity Low_complexity 1 301 0 582 209 0 0 chr17 18900926 18901060 -66537420 + (TG)n Simple_repeat Simple_repeat 2 135 0 1620 167 34 78 chr17 18901430 18901838 -66536642 - MLT1B LTR MaLR 0 390 1 408 301 98 0 chr17 18902398 18902551 -66535929 + L2 LINE L2 2494 2661 -653 896 239 8 51 chr17 18902553 18902787 -66535693 - MER58A DNA MER1_type 0 224 1 1317 211 11 18 chr17 18902842 18903126 -66535354 + AluJo SINE Alu 1 282 -30 321 118 0 0 chr17 18903133 18903184 -66535296 + (TA)n Simple_repeat Simple_repeat 1 51 0 213 65 0 0 chr17 18903183 18903214 -66535266 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 303 248 119 28 chr17 18903221 18903330 -66535150 - L1MEc LINE L1 -4339 2057 1939 354 206 6 26 chr17 18903970 18904201 -66534279 - HSAT5 Satellite Satellite -2 226 1 199 331 49 68 chr17 18905019 18905182 -66533298 - MIR SINE MIR -19 243 84 260 355 45 26 chr17 18905835 18905990 -66532490 - MIR SINE MIR -21 241 84 2072 122 0 0 chr17 18909850 18910146 -66528334 + AluSq SINE Alu 1 296 -17 186 143 0 0 chr17 18914431 18914466 -66524014 + (TCC)n Simple_repeat Simple_repeat 2 36 0 189 0 0 0 chr17 18916020 18916041 -66522439 + (CAGC)n Simple_repeat Simple_repeat 4 24 0 253 376 18 0 chr17 18916433 18916542 -66521938 + ERVL LTR ERVL 4243 4353 -1411 21 36 0 0 chr17 18916905 18916933 -66521547 + AT_rich Low_complexity Low_complexity 1 28 0 2177 146 6 0 chr17 18917073 18917423 -66521057 + MER41B LTR ERV1 1 352 -283 1308 110 5 5 chr17 18917423 18917623 -66520857 - MER4E LTR ERV1 0 766 567 530 62 38 12 chr17 18917622 18917702 -66520778 - MER4B LTR ERV1 -358 252 171 * 2704 74 11 3 chr17 18917707 18918084 -66520396 - MER41A LTR ERV1 -174 380 1 438 279 130 0 chr17 18919206 18919367 -66519113 + MER5A DNA MER1_type 6 187 -2 484 138 28 10 chr17 18919746 18919992 -66518488 + AluSx SINE Alu 1 296 -13 2347 68 0 7 chr17 18920509 18920805 -66517675 - AluY SINE Alu -16 295 2 959 77 23 0 chr17 18920824 18920954 -66517526 - AluSq/x SINE Alu -179 133 1 714 279 135 16 chr17 18921067 18921563 -66516917 + L2 LINE L2 2544 3103 -210 390 224 18 109 chr17 18921931 18922051 -66516429 - L1MD3 LINE L1 0 7995 7892 1549 71 0 0 chr17 18922051 18922248 -66516232 + AluY SINE Alu 103 299 -12 390 224 18 109 chr17 18922248 18922292 -66516188 - L1MD3 LINE L1 -103 7892 7846 1575 140 3 129 chr17 18922294 18922651 -66515829 + AluJo SINE Alu 1 312 0 539 181 7 81 chr17 18922909 18923058 -66515422 + MER20 DNA MER1_type 30 167 -52 492 275 8 8 chr17 18923721 18923852 -66514628 + MIR SINE MIR 20 150 -58 1100 177 0 5 chr17 18924050 18924248 -66514232 - AluJo SINE Alu -18 294 98 2045 108 0 3 chr17 18924296 18924582 -66513898 - AluSq SINE Alu -7 306 22 3291 227 41 18 chr17 18924594 18924813 -66513667 - L1M4 LINE L1 -1227 4919 4707 1374 174 15 67 chr17 18924813 18925141 -66513339 - AluJo SINE Alu -1 311 1 3291 227 41 18 chr17 18925141 18925825 -66512655 - L1M4 LINE L1 -1439 4707 3995 977 132 13 0 chr17 18925834 18925986 -66512494 + AluJb SINE Alu 11 164 -148 * 1033 161 6 0 chr17 18925985 18926146 -66512334 - AluSx SINE Alu -150 162 1 2361 175 50 19 chr17 18926146 18926609 -66511871 + L1MB7 LINE L1 5698 6174 -10 421 135 48 127 chr17 18927340 18927389 -66511091 + MER103 DNA DNA 4 55 -111 2335 84 7 0 chr17 18927389 18927698 -66510782 + AluSq SINE Alu 1 311 -2 421 135 48 127 chr17 18927698 18927774 -66510706 + MER103 DNA DNA 55 119 -47 402 278 31 52 chr17 18928514 18928705 -66509775 + L2 LINE L2 2917 3103 -169 665 297 12 40 chr17 18928711 18928960 -66509520 + MIR SINE MIR 7 248 -14 362 380 63 11 chr17 18929218 18929489 -66508991 + L1ME LINE L1 5355 5639 -531 3920 133 33 18 chr17 18929684 18930314 -66508166 - MER51C LTR ERV1 0 640 1 294 106 0 0 chr17 18930352 18930399 -66508081 + (CA)n Simple_repeat Simple_repeat 1 47 0 278 244 148 0 chr17 18931298 18931413 -66507067 - MLT1E2 LTR MaLR -269 357 226 604 277 83 22 chr17 18932135 18932413 -66506067 + L2 LINE L2 3019 3313 0 5266 155 29 10 chr17 18932427 18932954 -66505526 + L1PA16 LINE L1 4475 4991 -1175 2083 84 0 0 chr17 18932954 18933227 -66505253 + AluY SINE Alu 37 309 -2 5266 155 29 10 chr17 18933227 18934337 -66504143 + L1PA16 LINE L1 4991 6145 -21 360 0 0 0 chr17 18934704 18934744 -66503736 + (CA)n Simple_repeat Simple_repeat 1 40 0 834 122 0 0 chr17 18935246 18935369 -66503111 - FRAM SINE Alu -8 168 46 598 253 130 0 chr17 18935701 18935962 -66502518 + L1M4 LINE L1 5011 5305 -841 2305 103 0 0 chr17 18935985 18936297 -66502183 - AluSx SINE Alu 0 312 1 8536 102 6 5 chr17 18936370 18938196 -66500284 - L1PA8A LINE L1 -258 5873 4052 1237 255 25 68 chr17 18938182 18938770 -66499710 + L1MC/D LINE L1 5219 5780 -746 * 1707 307 108 73 chr17 18939349 18940073 -66498407 + L1M4 LINE L1 2972 3669 -2477 2095 80 3 21 chr17 18940073 18940396 -66498084 + AluY SINE Alu 1 318 0 1707 307 108 73 chr17 18940396 18940661 -66497819 + L1M4 LINE L1 3669 3923 -2223 2294 97 3 0 chr17 18940661 18940972 -66497508 + AluSp SINE Alu 1 312 -1 2192 103 3 0 chr17 18940982 18941282 -66497198 + AluSq SINE Alu 1 301 -12 1707 307 108 73 chr17 18941282 18941686 -66496794 + L1M4 LINE L1 3931 4427 -1719 360 282 90 43 chr17 18943272 18943501 -66494979 + L1M4 LINE L1 2962 3179 -2967 2348 64 0 3 chr17 18943501 18943796 -66494684 + AluY SINE Alu 1 294 -17 360 282 90 43 chr17 18943796 18944009 -66494471 + L1M4 LINE L1 3179 3425 -2721 938 85 0 8 chr17 18944011 18944140 -66494340 + AluSq/x SINE Alu 1 128 -185 2176 116 0 0 chr17 18944140 18944450 -66494030 + AluSg SINE Alu 1 310 0 849 305 50 17 chr17 18944452 18945095 -66493385 + L1M4 LINE L1 3422 4085 -2061 205 241 0 0 chr17 18945205 18945259 -66493221 + (TAAG)n Simple_repeat Simple_repeat 1 54 0 431 274 72 20 chr17 18945259 18945412 -66493068 + L1M4 LINE L1 4211 4371 -1775 3066 183 43 13 chr17 18946809 18947433 -66491047 - L1PB4 LINE L1 0 6156 5514 854 219 6 0 chr17 18947441 18947624 -66490856 - L1PB4 LINE L1 -1089 5057 4874 605 260 52 34 chr17 18947640 18947909 -66490571 - L1MCa LINE L1 -1983 4443 4170 380 344 32 14 chr17 18948514 18948732 -66489748 + HERVL74 LTR ERVL 1835 2056 -3629 25 51 0 0 chr17 18949315 18949354 -66489126 + AT_rich Low_complexity Low_complexity 1 39 0 1204 73 0 51 chr17 18949631 18949808 -66488672 - L1PB1 LINE L1 -2 6149 5982 287 385 32 5 chr17 18950225 18950412 -66488068 + HERVL74 LTR ERVL 2580 2771 -785 870 297 99 18 chr17 18953328 18953712 -66484768 - MER57B LTR ERV1 -10 424 10 1495 241 83 36 chr17 18954469 18955328 -66483152 - L1MCa LINE L1 -3223 3203 2316 749 266 19 53 chr17 18955324 18955541 -66482939 - L1MA10 LINE L1 0 6334 6130 * 2204 100 0 3 chr17 18955541 18955840 -66482640 - AluSc SINE Alu -9 300 3 749 266 19 53 chr17 18955840 18955945 -66482535 - L1MA10 LINE L1 -204 6130 6023 261 177 63 0 chr17 18955959 18956038 -66482442 - L1MA9 LINE L1 0 6312 6229 603 268 68 27 chr17 18956076 18956337 -66482143 - L1M4c LINE L1 -3898 2486 2204 2245 106 0 0 chr17 18956337 18956640 -66481840 - AluSg1 SINE Alu -6 303 1 603 268 68 27 chr17 18956640 18956747 -66481733 - L1M4c LINE L1 -4180 2204 2103 186 143 0 0 chr17 18957318 18957353 -66481127 + (TCC)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr17 18958837 18958862 -66479618 + AT_rich Low_complexity Low_complexity 1 25 0 696 325 55 13 chr17 18959510 18960061 -66478419 + HERVL74 LTR ERVL 3963 4624 -1140 3418 102 13 83 chr17 18962057 18962658 -66475822 - LTR8 LTR ERV1 -1 690 132 1879 141 7 3 chr17 18962677 18962974 -66475506 + AluJb SINE Alu 5 302 -10 1811 151 3 16 chr17 18963076 18963380 -66475100 - AluSx SINE Alu -12 300 1 1332 209 18 7 chr17 18963473 18963755 -66474725 + AluJo SINE Alu 12 296 -16 505 323 19 15 chr17 18963877 18963968 -66474512 + L1ME4a LINE L1 5615 5704 -417 2042 107 33 0 chr17 18963968 18964267 -66474213 - AluSq SINE Alu -3 310 2 505 323 19 15 chr17 18964267 18964435 -66474045 + L1ME4a LINE L1 5704 5875 -246 760 220 122 16 chr17 18965448 18965703 -66472777 + MLT1C LTR MaLR 1 282 -185 235 232 150 13 chr17 18965713 18965803 -66472677 + MLT1C LTR MaLR 225 419 -47 598 130 84 97 chr17 18966684 18966838 -66471642 + FRAM SINE Alu 17 168 -8 188 255 78 0 chr17 18966844 18966895 -66471585 + MIR SINE MIR 20 74 -188 785 270 70 7 chr17 18966909 18967209 -66471271 - LTR16C LTR ERVL -18 473 155 224 233 14 41 chr17 18967343 18967416 -66471064 + MIR SINE MIR 65 135 -127 186 300 17 0 chr17 18967521 18967581 -66470899 - MIR SINE MIR -117 145 85 394 339 145 8 chr17 18967818 18968066 -66470414 - L1MC/D LINE L1 -2090 5718 5437 263 224 17 0 chr17 18969682 18969740 -66468740 - L2 LINE L2 -15 3298 3240 399 309 48 5 chr17 18969751 18969939 -66468541 - LTR16B LTR ERVL -1 463 268 260 231 154 0 chr17 18970030 18970108 -66468372 - LTR16A LTR ERVL -351 99 10 1096 143 49 90 chr17 18970233 18970478 -66468002 + AluJo SINE Alu 1 235 -77 521 238 130 61 chr17 18970513 18970744 -66467736 + MLT1J LTR MaLR 219 465 -46 2223 99 3 0 chr17 18970789 18971091 -66467389 - AluSx SINE Alu -9 303 1 1010 155 52 3 chr17 18971115 18971490 -66466990 - L1MB3 LINE L1 -28 6155 5706 576 115 0 0 chr17 18971490 18971568 -66466912 + AluSg/x SINE Alu 219 296 -16 539 130 0 104 chr17 18971568 18971683 -66466797 - L1MB3 LINE L1 -474 5709 5607 1527 190 150 34 chr17 18972279 18972632 -66465848 + MSTD LTR MaLR 3 396 0 434 262 63 0 chr17 18972857 18972983 -66465497 + MER5A DNA MER1_type 7 140 -49 1084 253 54 39 chr17 18973145 18973477 -66465003 - L1ME3 LINE L1 -25 6137 5801 266 286 41 31 chr17 18974594 18974692 -66463788 + L3b LINE CR1 1345 1443 -140 444 303 117 0 chr17 18975053 18975241 -66463239 - MIR SINE MIR -10 252 43 222 301 96 12 chr17 18975250 18975333 -66463147 - MIR SINE MIR -3 259 170 521 353 59 28 chr17 18975528 18975882 -66462598 + L1ME4a LINE L1 5533 5897 -224 342 248 29 19 chr17 18976048 18976153 -66462327 - L1MC4 LINE L1 -4 8038 7933 1811 171 10 7 chr17 18976154 18976464 -66462016 - AluSx SINE Alu -1 311 1 311 272 132 9 chr17 18977056 18977170 -66461310 + MIR SINE MIR 18 145 -117 202 286 95 0 chr17 18977282 18977345 -66461135 - L2 LINE L2 -56 3216 3148 447 263 51 40 chr17 18978057 18978232 -66460248 + MER69 DNA AcHobo 31 207 -2319 392 295 130 25 chr17 18978267 18978467 -66460013 + MER69 DNA AcHobo 317 537 -1989 300 291 119 0 chr17 18978830 18978964 -66459516 + MIR SINE MIR 13 162 -100 261 314 88 22 chr17 18979259 18979396 -66459084 - LTR16C LTR ERVL -281 210 65 1399 266 69 47 chr17 18979540 18980163 -66458317 - L1MC4a LINE L1 -1916 5892 5256 222 319 52 7 chr17 18980714 18980849 -66457631 - MIR3 SINE MIR -17 191 51 180 145 161 32 chr17 18981056 18981118 -66457362 - L2 LINE L2 -360 2953 2884 256 278 14 0 chr17 18981907 18981979 -66456501 + MIR SINE MIR 62 134 -74 388 316 15 8 chr17 18982076 18982209 -66456271 - L2 LINE L2 0 3313 3180 250 178 314 8 chr17 18982255 18982373 -66456107 - L2 LINE L2 -265 3048 2895 195 286 0 16 chr17 18982487 18982550 -66455930 - L3b LINE CR1 -200 1383 1322 262 280 227 29 chr17 18982967 18983310 -66455170 + L2 LINE L2 2553 2963 -351 531 257 66 0 chr17 18983404 18983556 -66454924 + MER3 DNA MER1_type 1 162 -47 2169 113 6 0 chr17 18983728 18984039 -66454441 + AluSp SINE Alu 1 313 0 1788 101 4 0 chr17 18984434 18984681 -66453799 - AluSx SINE Alu -12 300 53 2158 91 0 7 chr17 18985869 18986165 -66452315 - AluY SINE Alu -17 294 1 306 188 38 38 chr17 18986166 18986246 -66452234 + MER3 DNA MER1_type 125 204 -5 525 288 76 0 chr17 18986273 18986457 -66452023 + L2 LINE L2 3116 3313 0 221 240 27 40 chr17 18986507 18986582 -66451898 + MIR SINE MIR 56 129 -133 1386 47 0 134 chr17 18986650 18986882 -66451598 + LTR14A LTR ERVK 1 201 -143 2087 165 35 2 chr17 18986882 18987282 -66451198 - L1PB4 LINE L1 -205 5951 5539 23 0 0 0 chr17 18988197 18988220 -66450260 + AT_rich Low_complexity Low_complexity 1 23 0 333 301 96 7 chr17 18988247 18988383 -66450097 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 18988998 18989022 -66449458 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 312 292 118 21 chr17 18989353 18989497 -66448983 - MIR3 SINE MIR -7 201 44 335 383 37 10 chr17 18990532 18990934 -66447546 - L2 LINE L2 -404 2910 2498 190 286 71 24 chr17 18993173 18993257 -66445223 + MIR3 SINE MIR 100 187 -21 233 234 9 103 chr17 18999182 18999289 -66439191 + MIR SINE MIR 52 148 -60 203 326 22 56 chr17 19000573 19000662 -66437818 - MIR SINE MIR -62 146 61 347 269 108 38 chr17 19002100 19002286 -66436194 + L2 LINE L2 3103 3301 -12 443 266 65 0 chr17 19002311 19002435 -66436045 - MIR SINE MIR -43 219 88 5801 130 26 35 chr17 19003811 19004789 -66433691 + LTR5 LTR ERVK 1 969 0 301 226 28 75 chr17 19005223 19005329 -66433151 + MIR SINE MIR 44 144 -64 243 316 90 13 chr17 19005361 19005510 -66432970 + MIR SINE MIR 11 167 -72 420 268 39 0 chr17 19006029 19006156 -66432324 - MIR SINE MIR -111 151 20 350 276 118 7 chr17 19006235 19006387 -66432093 - MIR3 SINE MIR -7 201 33 215 280 0 0 chr17 19007174 19007249 -66431231 + (TGG)n Simple_repeat Simple_repeat 1 75 0 467 298 13 20 chr17 19010074 19010246 -66428234 - MIR SINE MIR -88 174 3 208 355 45 35 chr17 19010499 19010699 -66427781 + L2 LINE L2 2564 2765 -549 27 0 0 0 chr17 19010835 19010862 -66427618 + AT_rich Low_complexity Low_complexity 1 27 0 2267 88 0 10 chr17 19010888 19011184 -66427296 - AluY SINE Alu -18 293 1 3580 58 0 9 chr17 19011189 19011637 -66426843 - L1PA6 LINE L1 0 6154 5711 4285 256 101 45 chr17 19011704 19012930 -66425550 - HAL1 LINE L1 -123 2384 1228 1898 169 0 0 chr17 19012930 19013226 -66425254 + AluJb SINE Alu 1 296 -16 4285 256 101 45 chr17 19013226 19013893 -66424587 - HAL1 LINE L1 -1279 1228 353 2326 83 0 3 chr17 19013893 19014193 -66424287 - AluY SINE Alu -12 299 1 4285 256 101 45 chr17 19014193 19014460 -66424020 - HAL1 LINE L1 -2154 353 102 437 272 31 63 chr17 19016216 19016407 -66422073 - MIR SINE MIR -50 212 28 211 302 0 0 chr17 19017413 19017499 -66420981 + (TGG)n Simple_repeat Simple_repeat 2 87 0 500 312 40 13 chr17 19017902 19018052 -66420428 - MIR3 SINE MIR -42 166 33 343 308 115 45 chr17 19018565 19018735 -66419745 - MIR3 SINE MIR -20 188 8 226 319 166 47 chr17 19019067 19019236 -66419244 + MER5A DNA MER1_type 1 189 0 830 155 23 0 chr17 19019779 19019908 -66418572 + FLAM_A SINE Alu 2 133 0 241 169 153 0 chr17 19021942 19022001 -66416479 - L2 LINE L2 -1 3271 3204 265 268 28 0 chr17 19022453 19022524 -66415956 - MIR SINE MIR -28 234 162 2174 117 0 0 chr17 19022531 19022830 -66415650 - AluSx SINE Alu -13 299 1 560 290 139 57 chr17 19022876 19023242 -66415238 + L2 LINE L2 2857 3252 -20 346 269 126 8 chr17 19023255 19023374 -66415106 - MIR SINE MIR -123 139 7 2415 64 0 0 chr17 19024427 19024722 -66413758 - AluY SINE Alu -3 308 14 888 264 90 0 chr17 19025556 19025890 -66412590 + MER113 DNA MER1_type? 46 409 -112 725 129 10 0 chr17 19025891 19025992 -66412488 + AluJ/FLAM SINE Alu 1 102 -210 256 358 156 12 chr17 19026329 19026572 -66411908 + L2 LINE L2 3030 3307 -6 284 302 324 0 chr17 19026716 19026895 -66411585 + MIR SINE MIR 6 242 -20 314 248 171 0 chr17 19027311 19027416 -66411064 - L2 LINE L2 -1 3271 3149 732 220 111 89 chr17 19027516 19027976 -66410504 - MER113 DNA MER1_type? -51 470 1 520 232 93 93 chr17 19028206 19028603 -66409877 - L1ME4a LINE L1 0 6121 5725 243 0 0 0 chr17 19028649 19028676 -66409804 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 757 241 6 13 chr17 19028679 19028837 -66409643 - AluJo SINE Alu -31 281 125 383 259 86 26 chr17 19028844 19028960 -66409520 - L1ME4a LINE L1 -440 5681 5559 1851 143 0 7 chr17 19029198 19029477 -66409003 + AluSx SINE Alu 1 277 -35 276 364 93 12 chr17 19029969 19030131 -66408349 - MIR SINE MIR -75 187 13 457 265 244 17 chr17 19030719 19030957 -66407523 - L2 LINE L2 -1 3312 3021 188 266 0 62 chr17 19031050 19031114 -66407366 - MIR SINE MIR -110 152 93 311 245 192 6 chr17 19031148 19031311 -66407169 - MIR SINE MIR -53 209 16 1981 123 37 0 chr17 19031369 19031669 -66406811 - AluY SINE Alu 0 311 1 484 241 221 0 chr17 19031863 19032008 -66406472 + MER5A DNA MER1_type 13 189 0 275 275 12 12 chr17 19032366 19032446 -66406034 - L2 LINE L2 -5 3308 3229 228 195 0 0 chr17 19032590 19032631 -66405849 - L2 LINE L2 -216 3056 3016 199 262 6 6 chr17 19032685 19032853 -66405627 + (CA)n Simple_repeat Simple_repeat 1 168 0 243 250 12 6 chr17 19032880 19033040 -66405440 + (CA)n Simple_repeat Simple_repeat 1 161 0 339 332 95 43 chr17 19033838 19034049 -66404431 + MIR SINE MIR 28 249 -13 325 327 9 9 chr17 19034316 19034429 -66404051 + L2 LINE L2 2251 2363 -951 1065 229 9 0 chr17 19034456 19034670 -66403810 + MER20 DNA MER1_type 4 219 0 1697 131 6 68 chr17 19034728 19035064 -66403416 - MER1B DNA MER1_type -24 315 1 21 71 0 0 chr17 19036071 19036113 -66402367 + AT_rich Low_complexity Low_complexity 1 42 0 2081 107 0 4 chr17 19037654 19037966 -66400514 - AluSc SINE Alu 0 311 1 2244 96 0 29 chr17 19038022 19038334 -66400146 - AluSx SINE Alu -9 303 1 1561 170 52 4 chr17 19038868 19039151 -66399329 - AluJo SINE Alu -26 286 3 228 250 52 73 chr17 19040078 19040174 -66398306 - MIR SINE MIR -7 255 162 466 183 54 0 chr17 19040210 19040303 -66398177 - Charlie1 DNA MER1_type -30 2731 2634 704 212 65 54 chr17 19040317 19040456 -66398024 - Charlie1 DNA MER1_type -2544 217 73 1909 132 0 21 chr17 19040456 19040779 -66397701 + AluJb SINE Alu 1 317 0 704 212 65 54 chr17 19040779 19040822 -66397658 - Charlie1 DNA MER1_type -2688 73 32 361 306 148 27 chr17 19040863 19041046 -66397434 - MIR SINE MIR -24 238 34 397 229 0 26 chr17 19041853 19041967 -66396513 + L1ME2 LINE L1 6053 6163 -1 2178 96 0 54 chr17 19041979 19042292 -66396188 + AluY SINE Alu 1 296 -15 2229 132 0 3 chr17 19042488 19042799 -66395681 + AluSx SINE Alu 1 310 -2 1687 151 60 17 chr17 19043760 19044059 -66394421 + AluJo SINE Alu 1 312 0 1610 140 0 0 chr17 19045955 19046183 -66392297 - AluJb SINE Alu 0 312 85 814 282 91 35 chr17 19046263 19046749 -66391731 - L1ME4a LINE L1 -1 6120 5608 2157 119 8 72 chr17 19047076 19047436 -66391044 + MER1B DNA MER1_type 1 337 0 210 248 238 9 chr17 19047832 19047937 -66390543 + MIR SINE MIR 117 245 -17 2245 95 14 0 chr17 19048093 19048387 -66390093 + AluSp SINE Alu 1 298 -15 1975 146 13 16 chr17 19048511 19048819 -66389661 - AluJb SINE Alu -5 307 1 1240 167 9 32 chr17 19048852 19049068 -66389412 + AluJb SINE Alu 77 287 -25 541 276 132 63 chr17 19049532 19049851 -66388629 - MER102b DNA MER1_type 0 341 1 192 192 10 162 chr17 19050314 19050413 -66388067 - MER5A DNA MER1_type -105 84 1 2240 91 3 7 chr17 19050897 19051241 -66387239 - AluSp SINE Alu 0 343 1 1023 104 0 0 chr17 19051249 19051384 -66387096 - AluSp/q SINE Alu -22 291 157 413 143 0 0 chr17 19052692 19052748 -66385732 + AluJ/FLAM SINE Alu 2 57 -255 2432 130 29 11 chr17 19052748 19053374 -66385106 + L1P4 LINE L1 5000 5636 -529 807 206 0 0 chr17 19053375 19053545 -66384935 - L1P LINE L1 -1253 4893 4724 492 191 0 0 chr17 19053542 19053636 -66384844 + L1 LINE L1 4595 4688 -1458 * 863 205 44 44 chr17 19053636 19053841 -66384639 + Tigger2 DNA MER2_type 2511 2715 -3 2112 246 101 113 chr17 19053842 19055399 -66383081 + L1MC4a LINE L1 6515 7995 0 777 126 42 48 chr17 19055489 19055656 -66382824 + L1MC4 LINE L1 7242 7407 -635 10100 224 18 20 chr17 19055669 19058396 -66380084 + L1PA11 LINE L1 1122 4652 -2932 14433 180 17 18 chr17 19058401 19060132 -66378348 - L1PB1 LINE L1 -2 6865 5133 180 0 0 0 chr17 19060132 19060152 -66378328 + (TTA)n Simple_repeat Simple_repeat 2 21 0 14433 180 17 18 chr17 19060152 19060937 -66377543 - L1PB1 LINE L1 -1734 5133 4348 2272 153 22 30 chr17 19060937 19061304 -66377176 - THE1B LTR MaLR 0 364 1 14433 180 17 18 chr17 19061304 19062865 -66375615 - L1PB1 LINE L1 -2519 4348 2801 8319 149 17 15 chr17 19062866 19064987 -66373493 + L1PA11 LINE L1 5484 7611 -1 1404 235 119 9 chr17 19065006 19065435 -66373045 + L1MC4 LINE L1 7417 7892 -150 1547 201 7 3 chr17 19066198 19066506 -66371974 - AluJb SINE Alu 0 309 1 255 285 124 73 chr17 19066710 19067209 -66371271 - L2 LINE L2 0 3272 2745 327 274 53 26 chr17 19069031 19069144 -66369336 - MIR3 SINE MIR -48 160 45 2426 90 0 0 chr17 19069224 19069535 -66368945 + AluY SINE Alu 1 311 0 2245 120 0 0 chr17 19069549 19069857 -66368623 + AluSg SINE Alu 3 310 0 5091 75 29 15 chr17 19071149 19071800 -66366680 + PABL_A LTR ERV1 1 660 0 2350 103 0 0 chr17 19072358 19072660 -66365820 - AluSx SINE Alu -9 303 2 2190 110 6 31 chr17 19072897 19073214 -66365266 - AluSx SINE Alu -3 309 1 615 124 21 10 chr17 19073286 19073383 -66365097 + MER4A LTR ERV1 1 98 -566 1859 131 3 82 chr17 19073383 19073758 -66364722 + MER4A LTR ERV1 261 664 0 946 196 0 46 chr17 19074253 19074426 -66364054 - FAM SINE Alu -9 166 2 554 184 9 0 chr17 19076065 19076174 -66362306 + L1MA9 LINE L1 6164 6273 -39 2153 78 19 42 chr17 19078326 19078634 -66359846 - AluY SINE Alu -10 301 1 1200 283 142 20 chr17 19079383 19079876 -66358604 + MLT1G1 LTR MaLR 2 595 0 357 250 0 25 chr17 19080252 19080332 -66358148 + Tigger5 DNA MER2_type 2 79 -2244 251 282 0 14 chr17 19080350 19080421 -66358059 - Tigger5 DNA MER2_type -5 2318 2249 869 235 5 0 chr17 19081579 19081789 -66356691 + L1MA5 LINE L1 13 581 -6628 6661 234 84 27 chr17 19081881 19083818 -66354662 + L1MA5 LINE L1 841 2667 -4541 1935 162 0 13 chr17 19083818 19084133 -66354347 + AluSx SINE Alu 1 311 -1 6661 234 84 27 chr17 19084133 19084658 -66353822 + L1MA5 LINE L1 2667 3161 -4047 182 37 37 0 chr17 19084658 19084685 -66353795 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 6661 234 84 27 chr17 19084685 19085920 -66352560 + L1MA5 LINE L1 3161 4809 -2399 1667 175 29 79 chr17 19085911 19086390 -66352090 + L1MA5 LINE L1 5218 5672 -1536 * 1026 346 33 23 chr17 19086411 19086986 -66351494 + L1PA16 LINE L1 1 581 -6206 280 329 6 49 chr17 19087023 19087187 -66351293 + L1PA16 LINE L1 1363 1519 -5268 2385 130 0 12 chr17 19087286 19087624 -66350856 - MER1B DNA MER1_type 0 337 4 9932 240 45 48 chr17 19088363 19090674 -66347806 + L1PA16 LINE L1 1495 3812 -2985 294 29 0 0 chr17 19090674 19090709 -66347771 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 9932 240 45 48 chr17 19090709 19091498 -66346982 + L1PA16 LINE L1 3812 4602 -2195 712 188 0 40 chr17 19091498 19091647 -66346833 + FLAM_C SINE Alu 1 143 0 9932 240 45 48 chr17 19091647 19092768 -66345712 + L1PA16 LINE L1 4602 5799 -998 196 54 0 89 chr17 19092771 19092827 -66345653 + (GGGA)n Simple_repeat Simple_repeat 1 51 0 210 176 0 59 chr17 19093291 19093342 -66345138 + GA-rich Low_complexity Low_complexity 2 49 0 195 186 0 0 chr17 19093371 19093414 -66345066 + A-rich Low_complexity Low_complexity 1 43 0 4924 152 22 29 chr17 19094967 19096002 -66342478 + L1PA16 LINE L1 5792 6816 -1 3865 166 29 46 chr17 19096044 19097577 -66340903 + L1MA5 LINE L1 5662 7166 -196 1167 122 0 6 chr17 19097580 19097744 -66340736 - AluSg/x SINE Alu -14 296 134 914 140 12 7 chr17 19097754 19097929 -66340551 + L1MA5 LINE L1 7180 7360 -7 606 242 0 0 chr17 19097939 19098063 -66340417 + FLAM_A SINE Alu 1 124 -18 919 255 101 25 chr17 19098106 19098533 -66339947 + MLT1G1 LTR MaLR 45 593 -2 1198 208 143 5 chr17 19099898 19100277 -66338203 + L1MB8 LINE L1 4771 5201 -945 851 142 8 0 chr17 19100279 19100399 -66338081 + FLAM_C SINE Alu 1 121 -22 28 29 0 0 chr17 19100399 19100434 -66338046 + AT_rich Low_complexity Low_complexity 1 35 0 3685 166 24 17 chr17 19100441 19101363 -66337117 + L1MB8 LINE L1 5188 6177 -1 27 62 0 0 chr17 19101864 19101912 -66336568 + AT_rich Low_complexity Low_complexity 1 48 0 2850 0 0 0 chr17 19102219 19102523 -66335957 + AluYa5 SINE Alu 1 304 -7 405 320 59 0 chr17 19102857 19103010 -66335470 + L2 LINE L2 2722 2883 -431 1093 81 0 0 chr17 19103274 19103410 -66335070 + AluSq/x SINE Alu 1 136 -176 198 0 0 0 chr17 19103429 19103451 -66335029 + (A)n Simple_repeat Simple_repeat 1 22 0 1901 149 3 13 chr17 19105528 19105830 -66332650 - AluJb SINE Alu -13 299 1 2014 81 0 11 chr17 19106155 19106427 -66332053 - AluY SINE Alu -3 308 40 261 0 0 0 chr17 19106890 19106919 -66331561 + (TG)n Simple_repeat Simple_repeat 2 30 0 3683 194 68 4 chr17 19108672 19108922 -66329558 + L1PB3 LINE L1 4109 4341 -1805 207 114 0 0 chr17 19108922 19108957 -66329523 + (CAA)n Simple_repeat Simple_repeat 3 37 0 3683 194 68 4 chr17 19108957 19109546 -66328934 + L1PB3 LINE L1 4341 5002 -1144 853 144 0 0 chr17 19109556 19109681 -66328799 + FLAM_C SINE Alu 12 136 -7 387 0 0 0 chr17 19109699 19109742 -66328738 + (TA)n Simple_repeat Simple_repeat 1 43 0 574 125 0 11 chr17 19109743 19109831 -66328649 + L1PB3 LINE L1 6025 6111 -43 455 71 0 0 chr17 19109837 19109893 -66328587 - Alu SINE Alu -19 292 237 1692 113 13 0 chr17 19109893 19110152 -66328328 + AluSp SINE Alu 42 303 0 5635 114 20 10 chr17 19110152 19111118 -66327362 + L1PB3 LINE L1 5162 6154 0 1061 226 63 19 chr17 19111365 19111635 -66326845 + AluJo SINE Alu 1 282 -30 479 292 187 30 chr17 19112260 19112592 -66325888 - L2 LINE L2 -1 3312 2929 1673 295 69 15 chr17 19112598 19113263 -66325217 + L1ME LINE L1 40 740 -5656 2550 48 0 10 chr17 19113294 19113608 -66324872 - AluY SINE Alu 0 311 1 227 233 28 72 chr17 19113635 19113815 -66324665 + L1ME LINE L1 1028 1199 -5197 1386 257 41 38 chr17 19113874 19113926 -66324554 + L1ME LINE L1 1944 1994 -4221 1741 120 0 4 chr17 19113926 19114193 -66324287 - L1PB1 LINE L1 -7 6144 5879 1386 257 41 38 chr17 19114193 19114704 -66323776 + L1ME LINE L1 1994 2469 -3746 1069 76 0 0 chr17 19114752 19114884 -66323596 + AluY SINE Alu 1 132 -179 306 0 0 0 chr17 19114884 19114918 -66323562 + (A)n Simple_repeat Simple_repeat 1 34 0 3634 220 96 81 chr17 19114938 19115175 -66323305 + L1ME LINE L1 2507 2739 -3476 2173 51 98 0 chr17 19115175 19115450 -66323030 - AluY SINE Alu -9 302 1 3634 220 96 81 chr17 19115450 19115864 -66322616 + L1ME LINE L1 2739 3145 -3070 1822 179 43 6 chr17 19115864 19116216 -66322264 + MLT1A1 LTR MaLR 1 365 0 3634 220 96 81 chr17 19116216 19116845 -66321635 + L1ME LINE L1 3145 3824 -2391 2641 168 14 14 chr17 19116845 19117357 -66321123 + L1MC1 LINE L1 5821 6332 -1 3634 220 96 81 chr17 19117357 19117834 -66320646 + L1ME LINE L1 3824 4292 -1923 709 260 68 0 chr17 19117834 19118011 -66320469 + MER58A DNA MER1_type 2 190 -34 911 214 8 41 chr17 19118135 19118378 -66320102 + L1ME LINE L1 5430 5664 -571 387 248 149 14 chr17 19118379 19118520 -66319960 + L1MA10 LINE L1 6166 6325 -9 233 313 53 91 chr17 19118599 19118807 -66319673 - L2 LINE L2 -529 2785 2586 711 264 32 37 chr17 19119973 19120189 -66318291 - MIR SINE MIR -25 237 23 214 189 0 0 chr17 19120404 19120441 -66318039 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr17 19120548 19120569 -66317911 + AT_rich Low_complexity Low_complexity 1 21 0 2416 100 0 0 chr17 19120576 19120886 -66317594 + AluSg SINE Alu 1 310 0 420 287 179 31 chr17 19121352 19121575 -66316905 + L2 LINE L2 1652 1907 -1407 2320 86 16 0 chr17 19122319 19122623 -66315857 + AluSc SINE Alu 1 309 0 2375 45 42 0 chr17 19122629 19122918 -66315562 + AluY SINE Alu 1 301 -10 200 35 35 0 chr17 19123480 19123509 -66314971 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 198 103 0 0 chr17 19124391 19124420 -66314060 + (T)n Simple_repeat Simple_repeat 1 29 0 2811 274 135 45 chr17 19124476 19125869 -66312611 - L2 LINE L2 -6 3307 1778 356 315 11 0 chr17 19126440 19126529 -66311951 + MER58A DNA MER1_type 1 90 -17 302 261 0 0 chr17 19126535 19126600 -66311880 + MER58A DNA MER1_type 160 224 0 322 202 61 53 chr17 19127030 19127144 -66311336 - L1MCa LINE L1 -4320 2106 1992 500 281 94 49 chr17 19127160 19127488 -66310992 - L1MC/D LINE L1 -2079 5729 5387 2167 132 6 0 chr17 19127570 19127881 -66310599 - AluSp SINE Alu 0 313 1 27 0 0 0 chr17 19128220 19128247 -66310233 + AT_rich Low_complexity Low_complexity 1 27 0 261 0 0 0 chr17 19128573 19128602 -66309878 + (T)n Simple_repeat Simple_repeat 1 29 0 2154 140 0 12 chr17 19129359 19129681 -66308799 - 7SLRNA srpRNA srpRNA 0 320 3 21 36 0 0 chr17 19132045 19132073 -66306407 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr17 19132770 19132805 -66305675 + AT_rich Low_complexity Low_complexity 1 35 0 224 200 22 0 chr17 19133020 19133065 -66305415 - L2 LINE L2 -5 3308 3263 2055 110 0 21 chr17 19133638 19133929 -66304551 - AluSg SINE Alu -10 300 16 23 54 0 0 chr17 19134990 19135027 -66303453 + AT_rich Low_complexity Low_complexity 1 37 0 2495 53 0 7 chr17 19135268 19135570 -66302910 - AluY SINE Alu -11 300 1 631 234 126 0 chr17 19135699 19135866 -66302614 + Charlie1 DNA MER1_type 12 199 -2562 2412 65 3 0 chr17 19135913 19136219 -66302261 - AluY SINE Alu -4 307 1 376 221 0 0 chr17 19136228 19136323 -66302157 + Charlie1 DNA MER1_type 2622 2716 -45 22 0 0 0 chr17 19136324 19136346 -66302134 + AT_rich Low_complexity Low_complexity 1 22 0 597 161 0 0 chr17 19137060 19137153 -66301327 + Tigger7 DNA MER2_type 2399 2491 0 2070 169 19 19 chr17 19138136 19138550 -66299930 + L1MC1 LINE L1 5906 6319 -14 336 180 34 22 chr17 19138477 19138566 -66299914 + L1MC3 LINE L1 7694 7783 -2 23 0 0 0 chr17 19139076 19139099 -66299381 + AT_rich Low_complexity Low_complexity 1 23 0 2743 172 17 50 chr17 19139134 19139715 -66298765 + MER68 LTR ERV1 1 562 0 530 259 9 0 chr17 19140076 19140184 -66298296 + FAM SINE Alu 1 109 -76 2447 61 0 13 chr17 19140200 19140510 -66297970 + AluY SINE Alu 1 306 -5 681 264 155 0 chr17 19142434 19142627 -66295853 + MER58A DNA MER1_type 2 224 0 668 308 125 9 chr17 19142700 19143028 -66295452 + MLT1L LTR MaLR 5 370 -245 283 261 0 0 chr17 19143099 19143164 -66295316 + MLT1L LTR MaLR 546 610 -5 2228 112 3 19 chr17 19143211 19143525 -66294955 - AluSc SINE Alu 0 309 1 2063 128 3 0 chr17 19143561 19143850 -66294630 + AluSx SINE Alu 1 290 -22 1797 160 3 39 chr17 19144256 19144568 -66293912 - AluJo SINE Alu -11 301 1 1640 176 33 10 chr17 19145274 19145575 -66292905 - AluJo SINE Alu -4 308 1 2305 167 21 28 chr17 19145684 19146120 -66292360 + Tigger2a DNA MER2_type 2 434 0 21 0 0 0 chr17 19146150 19146171 -66292309 + AT_rich Low_complexity Low_complexity 1 21 0 2480 47 10 0 chr17 19146260 19146557 -66291923 + AluY SINE Alu 1 300 -11 553 146 0 64 chr17 19147969 19148079 -66290401 - U6 snRNA snRNA -1 106 4 2198 74 0 14 chr17 19148080 19148396 -66290084 - AluY SINE Alu 0 312 1 905 80 0 0 chr17 19148695 19148808 -66289672 - AluSg SINE Alu -197 113 1 2331 97 7 0 chr17 19150382 19150681 -66287799 + AluSx SINE Alu 1 301 -11 344 132 29 0 chr17 19150681 19150749 -66287731 + GA-rich Low_complexity Low_complexity 1 70 0 1465 145 16 21 chr17 19150831 19151073 -66287407 - LOR1b LTR ERV1 0 461 221 2334 110 0 3 chr17 19151088 19151398 -66287082 + AluSc SINE Alu 1 309 0 21 71 0 0 chr17 19151776 19151818 -66286662 + AT_rich Low_complexity Low_complexity 1 42 0 435 19 0 0 chr17 19153090 19153142 -66285338 + (TG)n Simple_repeat Simple_repeat 1 52 0 470 161 62 0 chr17 19153145 19153226 -66285254 + AluSg/x SINE Alu 208 293 -17 887 139 0 8 chr17 19153226 19153355 -66285125 - AluJo/FLAM SINE Alu -184 128 1 570 89 0 11 chr17 19153706 19153796 -66284684 + Alu SINE Alu 222 310 0 2006 139 0 31 chr17 19153797 19154120 -66284360 + AluSq SINE Alu 1 313 0 447 211 0 98 chr17 19154153 19154218 -66284262 + L1M4 LINE L1 4063 4112 -2034 2040 102 7 17 chr17 19154218 19154511 -66283969 + AluSx SINE Alu 23 312 0 447 211 0 98 chr17 19154511 19154568 -66283912 + L1M4 LINE L1 4112 4173 -1973 1446 174 55 4 chr17 19154575 19154823 -66283657 + AluSx SINE Alu 24 285 -23 207 0 0 0 chr17 19154823 19154846 -66283634 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 1675 190 10 0 chr17 19154901 19155196 -66283284 - AluJb SINE Alu -14 298 1 2068 112 3 30 chr17 19155201 19155505 -66282975 - AluSg SINE Alu -14 296 1 1213 157 164 0 chr17 19156559 19156852 -66281628 - L1MA8 LINE L1 -4 6287 5947 944 101 0 0 chr17 19156860 19156989 -66281491 + AluSg/x SINE Alu 182 310 0 464 233 35 47 chr17 19157035 19157207 -66281273 + L2 LINE L2 1841 2010 -1304 1389 206 4 7 chr17 19157335 19157607 -66280873 - MLT1A1 LTR MaLR -94 271 1 1430 230 143 65 chr17 19157612 19158021 -66280459 - L1M4 LINE L1 -3013 3133 2650 2205 55 98 0 chr17 19158021 19158296 -66280184 + AluY SINE Alu 1 302 -9 1430 230 143 65 chr17 19158296 19158559 -66279921 - L1M4 LINE L1 -3496 2650 2409 234 0 0 0 chr17 19158559 19158585 -66279895 + (T)n Simple_repeat Simple_repeat 1 26 0 578 208 0 15 chr17 19158585 19158715 -66279765 - AluY SINE Alu -179 132 5 252 0 0 0 chr17 19158771 19158799 -66279681 + (T)n Simple_repeat Simple_repeat 1 28 0 265 270 117 29 chr17 19210654 19210961 -66227519 - L1M4 LINE L1 -816 5330 4997 525 274 58 90 chr17 19211013 19211664 -66226816 + L1ME4a LINE L1 5379 6025 -96 324 251 64 106 chr17 19211692 19211927 -66226553 + L1ME4a LINE L1 5895 6119 -2 231 278 0 0 chr17 19211945 19211999 -66226481 - L2 LINE L2 -18 3295 3242 1065 238 94 18 chr17 19213031 19213601 -66224879 - L1M3 LINE L1 -736 5444 4827 405 275 41 45 chr17 19213655 19213670 -66224810 - L1M3 LINE L1 -1411 4735 4721 2514 138 65 14 chr17 19213670 19214083 -66224397 - Tigger2a DNA MER2_type 0 434 1 405 275 41 45 chr17 19214083 19214311 -66224169 - L1M3 LINE L1 -1425 4721 4493 1232 124 142 31 chr17 19214334 19214559 -66223921 - AluSx SINE Alu -10 302 53 207 0 0 0 chr17 19216094 19216117 -66222363 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1090 229 155 28 chr17 19216551 19216669 -66221811 - L1M3 LINE L1 -1703 4443 4341 411 21 0 0 chr17 19216669 19216717 -66221763 + (TA)n Simple_repeat Simple_repeat 2 49 0 1090 229 155 28 chr17 19216717 19217134 -66221346 - L1M3 LINE L1 -1805 4341 3840 1604 121 78 53 chr17 19217146 19217271 -66221209 - L1MB3 LINE L1 -7 6176 6056 2407 71 0 0 chr17 19217271 19217568 -66220912 + AluY SINE Alu 1 297 -14 1604 121 78 53 chr17 19217568 19217764 -66220716 - L1MB3 LINE L1 -127 6056 5847 763 284 91 54 chr17 19217769 19218625 -66219855 - L1M3 LINE L1 -2299 3847 2960 2971 230 59 21 chr17 19218629 19219288 -66219192 - L1ME1 LINE L1 -5 6161 5447 2123 107 0 23 chr17 19219288 19219598 -66218882 - AluSc SINE Alu -6 303 1 2971 230 59 21 chr17 19219598 19220085 -66218395 - L1ME1 LINE L1 -719 5447 4980 1019 227 36 73 chr17 19220097 19220268 -66218212 - L1M3 LINE L1 -3186 2960 2784 1989 136 0 11 chr17 19220268 19220609 -66217871 - AluSx SINE Alu 0 338 1 1019 227 36 73 chr17 19220609 19220820 -66217660 - L1M3 LINE L1 -3362 2784 2591 1985 121 21 3 chr17 19220820 19221109 -66217371 - AluY SINE Alu -17 294 1 684 121 64 70 chr17 19221111 19221232 -66217248 + Charlie1 DNA MER1_type 2600 2721 -40 2413 79 7 7 chr17 19221232 19221536 -66216944 + AluSp SINE Alu 1 304 -9 684 121 64 70 chr17 19221536 19221571 -66216909 + Charlie1 DNA MER1_type 2721 2755 -6 852 291 120 48 chr17 19221591 19222000 -66216480 - L1MEc LINE L1 -4347 2049 1671 2514 54 0 16 chr17 19222000 19222316 -66216164 - AluY SINE Alu 0 311 1 852 291 120 48 chr17 19222316 19223019 -66215461 - L1MEc LINE L1 -4725 1671 856 383 161 0 0 chr17 19223164 19223220 -66215260 + Tigger5 DNA MER2_type 1 56 -2267 428 212 59 0 chr17 19223225 19223310 -66215170 + Tigger5 DNA MER2_type 2234 2323 0 1160 259 150 13 chr17 19224059 19224438 -66214042 + LTR16A LTR ERVL 15 445 -5 403 282 117 29 chr17 19224500 19224706 -66213774 - L1ME LINE L1 -379 5742 5519 328 238 119 19 chr17 19226713 19226873 -66211607 + L1ME4a LINE L1 5709 5884 -237 257 191 0 107 chr17 19226901 19226985 -66211495 - L1MC/D LINE L1 -601 5758 5684 * 5781 138 52 13 chr17 19226978 19228892 -66209588 + L1MA8 LINE L1 4120 6176 -115 2436 84 0 0 chr17 19228892 19229189 -66209291 + AluSp SINE Alu 1 297 -16 5781 138 52 13 chr17 19229189 19229305 -66209175 + L1MA8 LINE L1 6176 6286 -5 894 143 11 53 chr17 19229342 19229544 -66208936 + L1MB3 LINE L1 5293 5490 -690 * 2735 108 5 0 chr17 19229542 19229929 -66208551 - L1PB3 LINE L1 -326 5828 5440 3326 159 12 2 chr17 19229946 19230506 -66207974 + L1MB3 LINE L1 5573 6138 -45 1983 153 17 11 chr17 19230523 19230876 -66207604 - L1MC1 LINE L1 -190 6143 5789 2040 154 102 0 chr17 19233038 19233401 -66205079 - MSTC LTR MaLR 0 428 29 2135 74 49 7 chr17 19233543 19233828 -66204652 + AluSg SINE Alu 1 297 -13 1535 154 122 0 chr17 19233878 19234164 -66204316 - MSTB1 LTR MaLR -13 419 99 708 180 43 7 chr17 19235819 19235958 -66202522 + MSTD LTR MaLR 4 147 -249 1934 130 28 87 chr17 19235985 19236228 -66202252 - L1MB5 LINE L1 -17 6157 5944 2388 88 0 3 chr17 19236228 19236536 -66201944 - AluSc SINE Alu -2 307 1 1934 130 28 87 chr17 19236536 19236684 -66201796 - L1MB5 LINE L1 -230 5944 5789 316 231 20 68 chr17 19236686 19236752 -66201728 - L1M4 LINE L1 -850 5296 5228 1597 183 111 63 chr17 19236752 19236792 -66201688 + MSTD LTR MaLR 1 38 -358 2174 100 0 7 chr17 19236792 19237098 -66201382 - AluSg SINE Alu 0 304 1 1597 183 111 63 chr17 19237098 19237434 -66201046 + MSTD LTR MaLR 38 396 0 316 231 20 68 chr17 19237434 19237514 -66200966 - L1M4 LINE L1 -918 5228 5157 1297 132 0 44 chr17 19237520 19237724 -66200756 - AluSg/x SINE Alu -17 295 101 5910 226 38 78 chr17 19237761 19238154 -66200326 - L1M4 LINE L1 -985 5161 4754 4687 136 32 73 chr17 19238154 19239085 -66199395 - L1MA4 LINE L1 0 6300 5408 5910 226 38 78 chr17 19239085 19239212 -66199268 - L1M4 LINE L1 -1392 4754 4623 1549 181 3 66 chr17 19239212 19239532 -66198948 - AluJo SINE Alu -7 305 6 5910 226 38 78 chr17 19239532 19239785 -66198695 - L1M4 LINE L1 -1523 4623 4361 1738 156 3 7 chr17 19239785 19240111 -66198369 - AluJb SINE Alu 0 327 3 5910 226 38 78 chr17 19240111 19241068 -66197412 - L1M4 LINE L1 -1785 4361 3367 2429 90 0 0 chr17 19241068 19241368 -66197112 + AluSg SINE Alu 1 300 -10 5910 226 38 78 chr17 19241368 19241437 -66197043 - L1M4 LINE L1 -2779 3367 3297 1908 84 0 24 chr17 19241437 19241688 -66196792 + AluSc SINE Alu 39 283 -26 5910 226 38 78 chr17 19241688 19242054 -66196426 - L1M4 LINE L1 -2849 3297 3129 2146 161 66 21 chr17 19242054 19242433 -66196047 - MSTD LTR MaLR 0 396 1 5910 226 38 78 chr17 19242433 19242889 -66195591 - L1M4 LINE L1 -3017 3129 2656 1018 98 0 0 chr17 19242936 19243069 -66195411 + AluSq/x SINE Alu 1 133 -180 1459 97 14 5 chr17 19243728 19243935 -66194545 + AluSc SINE Alu 86 294 -15 222 118 0 0 chr17 19244638 19244672 -66193808 + (A)n Simple_repeat Simple_repeat 1 34 0 222 306 20 51 chr17 19245569 19245667 -66192813 - L2 LINE L2 -897 2417 2323 2067 143 3 0 chr17 19245975 19246276 -66192204 - AluSx SINE Alu -9 303 2 314 248 168 29 chr17 19246696 19246833 -66191647 - L1ME LINE L1 -5580 490 335 28 61 0 0 chr17 19247014 19247063 -66191417 + AT_rich Low_complexity Low_complexity 1 49 0 2484 70 0 3 chr17 19247151 19247453 -66191027 + AluSg SINE Alu 2 302 -8 721 126 47 0 chr17 19247779 19247906 -66190574 - FLAM_C SINE Alu 0 133 1 738 266 43 3 chr17 19248347 19248629 -66189851 - L1 LINE L1 -2746 3400 3108 2275 77 7 3 chr17 19248847 19249145 -66189335 - AluSq SINE Alu -13 300 2 392 271 42 17 chr17 19249284 19249402 -66189078 + MIR SINE MIR 19 139 -123 1293 218 61 58 chr17 19249664 19250027 -66188453 - MLT1A1 LTR MaLR 0 365 2 2215 100 13 0 chr17 19250347 19250646 -66187834 - AluSc SINE Alu -6 303 1 267 103 0 0 chr17 19250927 19250966 -66187514 + (CA)n Simple_repeat Simple_repeat 2 40 0 581 266 63 36 chr17 19250970 19251304 -66187176 - L1MC4 LINE L1 -139 7903 7561 318 301 44 0 chr17 19251393 19251506 -66186974 - L1MC4 LINE L1 -529 7513 7396 1940 155 100 50 chr17 19251509 19251681 -66186799 + MSTB1 LTR MaLR 1 163 -269 2462 35 0 3 chr17 19251681 19252021 -66186459 - AluY SINE Alu 0 339 1 1940 155 100 50 chr17 19252021 19252246 -66186234 + MSTB1 LTR MaLR 163 419 -13 578 283 30 34 chr17 19252250 19252487 -66185993 - L1MC4a LINE L1 -491 7317 7082 6288 141 8 15 chr17 19252617 19253437 -66185043 + L1MA7 LINE L1 4959 5764 -527 2253 101 10 0 chr17 19253437 19253734 -66184746 + AluSc SINE Alu 1 300 -9 6288 141 8 15 chr17 19253734 19254259 -66184221 + L1MA7 LINE L1 5764 6291 0 2617 312 80 34 chr17 19254476 19254905 -66183575 - HERVL LTR ERVL -1252 4402 3994 1986 157 105 14 chr17 19254905 19255268 -66183212 + MSTD LTR MaLR 1 396 0 2617 312 80 34 chr17 19255268 19255721 -66182759 - HERVL LTR ERVL -1660 3994 3563 2487 152 55 123 chr17 19255721 19256061 -66182419 + MER74A LTR ERVL 1 284 -274 2320 95 0 3 chr17 19256061 19256357 -66182123 + AluSg SINE Alu 1 295 -15 2487 152 55 123 chr17 19256357 19256615 -66181865 + MER74A LTR ERVL 284 558 0 2617 312 80 34 chr17 19256615 19257132 -66181348 - HERVL LTR ERVL -2091 3563 2920 2200 108 3 7 chr17 19257132 19257428 -66181052 + AluSg SINE Alu 1 295 -15 2617 312 80 34 chr17 19257428 19257602 -66180878 - HERVL LTR ERVL -2734 2920 2755 1805 265 76 38 chr17 19257706 19258162 -66180318 - HERVL LTR ERVL -2565 2431 1941 2463 72 0 3 chr17 19258162 19258466 -66180014 - AluY SINE Alu -8 303 1 1805 265 76 38 chr17 19258466 19258665 -66179815 - HERVL LTR ERVL -3055 1941 1751 1890 304 67 47 chr17 19258746 19259306 -66179174 - HERVL LTR ERVL -3420 1576 1029 2383 99 0 3 chr17 19259306 19259620 -66178860 - AluSq SINE Alu 0 313 1 1890 304 67 47 chr17 19259620 19260145 -66178335 - HERVL LTR ERVL -3967 1029 469 688 286 19 66 chr17 19260236 19260508 -66177972 - HERVL LTR ERVL -4693 303 47 2067 109 0 7 chr17 19260508 19260793 -66177687 + AluSx SINE Alu 13 295 -17 688 286 19 66 chr17 19260793 19260838 -66177642 - HERVL LTR ERVL -4949 47 1 940 342 23 12 chr17 19260838 19261265 -66177215 - LTR16A LTR ERVL 0 450 19 346 265 113 55 chr17 19261290 19261485 -66176995 - L1M4 LINE L1 -3600 2546 2364 1330 233 51 36 chr17 19261485 19261876 -66176604 - MLT2C1 LTR ERVL 0 397 1 2324 84 0 32 chr17 19261885 19262196 -66176284 - AluSx SINE Alu -11 301 1 346 265 113 55 chr17 19262196 19262228 -66176252 - L1M4 LINE L1 -3789 2357 2295 1595 261 102 6 chr17 19262281 19262752 -66175728 + MLT1G LTR MaLR 75 590 0 938 81 0 0 chr17 19262878 19263001 -66175479 + AluSg/x SINE Alu 188 310 -2 444 266 146 26 chr17 19266358 19266591 -66171889 + MIR SINE MIR 2 262 0 2094 122 0 0 chr17 19266664 19266952 -66171528 - AluSx SINE Alu -24 288 1 228 143 0 0 chr17 19267196 19267238 -66171242 + (TA)n Simple_repeat Simple_repeat 1 42 0 889 129 8 8 chr17 19267460 19267584 -66170896 - FLAM_C SINE Alu -9 124 1 453 109 0 6 chr17 19267637 19267885 -66170595 + AluSx SINE Alu 1 305 -6 1659 191 3 7 chr17 19268155 19268438 -66170042 + AluJo SINE Alu 1 282 -30 230 217 0 0 chr17 19268502 19268548 -66169932 + Alu SINE Alu 82 127 -175 228 337 35 23 chr17 19268656 19268742 -66169738 + L3 LINE CR1 1484 1570 -7 28 102 0 0 chr17 19269940 19270038 -66168442 + AT_rich Low_complexity Low_complexity 1 98 0 538 234 113 11 chr17 19270283 19270465 -66168015 - L1ME3A LINE L1 -223 5947 5741 2620 243 141 74 chr17 19270500 19271319 -66167161 - L1MC4 LINE L1 -2 8040 7277 2239 105 7 0 chr17 19271319 19271623 -66166857 - AluSq SINE Alu -7 306 1 2620 243 141 74 chr17 19271623 19271635 -66166845 - L1MC4 LINE L1 -765 7277 7267 2368 97 0 0 chr17 19271635 19271935 -66166545 - AluYa5 SINE Alu -11 300 1 2620 243 141 74 chr17 19271935 19272009 -66166471 - L1MC4 LINE L1 -775 7267 7199 2338 92 0 0 chr17 19272009 19272302 -66166178 + AluSg SINE Alu 1 293 -17 2620 243 141 74 chr17 19272302 19272323 -66166157 - L1MC4 LINE L1 -843 7199 7181 207 0 0 0 chr17 19272323 19272346 -66166134 + (TA)n Simple_repeat Simple_repeat 2 24 0 2620 243 141 74 chr17 19272346 19272395 -66166085 - L1MC4 LINE L1 -861 7181 7137 2157 121 0 30 chr17 19272395 19272700 -66165780 + AluSx SINE Alu 1 296 -16 2620 243 141 74 chr17 19272700 19273052 -66165428 - L1MC4 LINE L1 -905 7137 6810 324 0 0 0 chr17 19273052 19273088 -66165392 + (TG)n Simple_repeat Simple_repeat 2 37 0 2620 243 141 74 chr17 19273088 19273345 -66165135 - L1MC4 LINE L1 -1232 6810 6345 619 220 245 17 chr17 19273391 19273632 -66164848 - L1MC4a LINE L1 -1634 6174 5879 260 0 57 0 chr17 19273640 19273675 -66164805 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 1761 166 14 0 chr17 19273682 19273960 -66164520 - AluJo SINE Alu -28 284 3 1608 168 27 27 chr17 19274061 19274358 -66164122 + AluJb SINE Alu 1 297 -15 493 280 100 87 chr17 19274616 19275087 -66163393 - L1MEd LINE L1 -5531 588 112 249 309 49 25 chr17 19275277 19275358 -66163122 + L2 LINE L2 3002 3084 -188 2429 75 7 0 chr17 19275515 19275809 -66162671 + AluSp SINE Alu 1 296 -17 23 97 0 0 chr17 19276064 19276136 -66162344 + AT_rich Low_complexity Low_complexity 1 72 0 270 73 0 0 chr17 19276468 19276509 -66161971 + (TG)n Simple_repeat Simple_repeat 2 42 0 360 0 0 0 chr17 19277019 19277059 -66161421 + (TG)n Simple_repeat Simple_repeat 2 41 0 830 226 139 62 chr17 19277270 19277593 -66160887 + MER7A DNA MER2_type 1 346 0 423 158 12 37 chr17 19277635 19277717 -66160763 + MER116 DNA Mariner 1 80 0 1971 153 0 3 chr17 19277723 19278024 -66160456 - AluSx SINE Alu -12 300 1 1730 137 107 0 chr17 19278187 19278458 -66160022 + AluSx SINE Alu 1 300 -12 600 251 89 34 chr17 19278587 19278766 -66159714 - MER5A DNA MER1_type 0 189 1 23 0 0 0 chr17 19279208 19279231 -66159249 + AT_rich Low_complexity Low_complexity 1 23 0 1234 199 34 21 chr17 19281091 19281327 -66157153 + MER8 DNA MER2_type 1 239 0 206 259 164 43 chr17 19282575 19282691 -66155789 + L2 LINE L2 3184 3313 0 1526 236 157 108 chr17 19283492 19283846 -66154634 - L1MC4 LINE L1 0 8042 7707 2329 74 0 10 chr17 19283846 19284143 -66154337 - AluY SINE Alu -15 296 3 1526 236 157 108 chr17 19284143 19285034 -66153446 - L1MC4 LINE L1 -335 7707 6737 195 357 71 0 chr17 19285757 19285855 -66152625 - MIR SINE MIR -125 137 33 3344 109 57 24 chr17 19286034 19286574 -66151906 - LTR9B LTR ERV1 -86 558 1 14574 87 24 16 chr17 19286575 19289063 -66149417 - HUERS-P3b LTR ERV1 -7 7411 4832 2286 86 3 0 chr17 19289063 19289365 -66149115 - AluSp SINE Alu -10 303 1 14574 87 24 16 chr17 19289365 19289487 -66148993 - HUERS-P3b LTR ERV1 -2586 4832 4713 6070 79 10 9 chr17 19289478 19290276 -66148204 - HUERS-P3b LTR ERV1 -3544 3874 3076 * 1801 122 0 0 chr17 19290276 19290530 -66147950 - AluSg SINE Alu -4 306 53 2082 209 31 3 chr17 19290543 19290931 -66147549 + LTR8 LTR ERV1 1 399 -292 6890 118 15 7 chr17 19290931 19292692 -66145788 - HUERS-P3b LTR ERV1 -4760 2658 747 444 135 360 0 chr17 19292704 19292815 -66145665 - HUERS-P3b LTR ERV1 -6859 559 409 354 216 41 52 chr17 19292818 19292915 -66145565 - HUERS-P3b LTR ERV1 -7322 96 1 1228 122 0 58 chr17 19292915 19293120 -66145360 - LTR9B LTR ERV1 0 644 452 243 304 87 17 chr17 19293457 19293572 -66144908 + L3 LINE CR1 979 1101 -476 1170 122 22 63 chr17 19293578 19293800 -66144680 + MER2 DNA MER2_type 2 214 -131 2110 84 3 16 chr17 19293848 19294156 -66144324 + AluSc SINE Alu 1 304 -5 200 133 0 0 chr17 19294188 19294218 -66144262 + L2 LINE L2 3277 3306 -7 * 259 239 28 42 chr17 19294194 19294265 -66144215 - L2 LINE L2 -7 3265 3196 507 165 16 58 chr17 19294730 19294851 -66143629 + FAM SINE Alu 70 185 0 910 143 243 14 chr17 19295159 19295369 -66143111 + MER58B DNA MER1_type 79 336 -5 1607 85 0 0 chr17 19295926 19296138 -66142342 - AluSg/x SINE Alu -10 300 89 2128 89 0 10 chr17 19296141 19296474 -66142006 - AluSc SINE Alu 0 309 1 1203 256 92 63 chr17 19297154 19297967 -66140513 - L1MC5 LINE L1 -881 6927 6166 1492 222 126 28 chr17 19297967 19298427 -66140053 + MLT1D LTR MaLR 1 505 0 1203 256 92 63 chr17 19298427 19298879 -66139601 - L1MC5 LINE L1 -1642 6166 5729 935 248 99 40 chr17 19298878 19299420 -66139060 + L1MEc LINE L1 2156 2687 -3528 * 1515 152 4 37 chr17 19299428 19299697 -66138783 + AluJo SINE Alu 1 260 -52 1783 139 11 0 chr17 19299703 19299977 -66138503 - AluSg SINE Alu -33 277 1 1049 8 25 0 chr17 19299977 19300095 -66138385 + MER107 DNA MER1_type 25 145 -52 236 75 0 25 chr17 19300095 19300135 -66138345 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2024 90 45 3 chr17 19300183 19300471 -66138009 - AluSg SINE Alu -10 300 1 2082 99 14 3 chr17 19300620 19300914 -66137566 - AluSx SINE Alu -15 297 1 1025 215 0 6 chr17 19300945 19301122 -66137358 + MER41D LTR ERV1 382 557 0 279 0 0 0 chr17 19301284 19301315 -66137165 + (TG)n Simple_repeat Simple_repeat 1 31 0 2237 79 0 26 chr17 19301757 19302061 -66136419 + AluY SINE Alu 1 296 -15 796 113 0 0 chr17 19302763 19302869 -66135611 - AluSq/x SINE Alu -206 107 2 2728 151 14 12 chr17 19303319 19303803 -66134677 - MER31A LTR ERV1 0 485 1 493 195 81 16 chr17 19304563 19304686 -66133794 - L1MA9 LINE L1 -1 6311 6181 267 247 67 0 chr17 19304689 19304778 -66133702 - L1MA9 LINE L1 -231 6081 5987 1775 187 31 72 chr17 19304895 19305382 -66133098 + MLT1C LTR MaLR 1 467 0 2155 101 0 3 chr17 19305438 19305736 -66132744 + AluSx SINE Alu 1 297 -15 333 0 0 0 chr17 19306205 19306242 -66132238 + (TG)n Simple_repeat Simple_repeat 2 38 0 4392 162 18 36 chr17 19306246 19306734 -66131746 - L1MB5 LINE L1 -19 6155 5687 1394 196 0 58 chr17 19306734 19306954 -66131526 + AluJo SINE Alu 1 199 -113 2113 88 3 3 chr17 19306954 19307238 -66131242 + AluSp SINE Alu 20 303 -10 1394 196 0 58 chr17 19307238 19307329 -66131151 + AluJo SINE Alu 199 294 -18 4392 162 18 36 chr17 19307329 19307678 -66130802 - L1MB5 LINE L1 -487 5687 5333 2138 108 10 3 chr17 19307688 19307995 -66130485 - AluSx SINE Alu -3 309 1 701 176 8 8 chr17 19308086 19308217 -66130263 - FLAM_C SINE Alu 0 133 3 1696 115 0 0 chr17 19308570 19308805 -66129675 - AluSq SINE Alu -65 248 14 1871 159 18 0 chr17 19308842 19309175 -66129305 + L1MB3 LINE L1 5838 6176 -7 1327 215 37 100 chr17 19309199 19309338 -66129142 + MER67B LTR ERV1 1 147 -514 1506 165 0 46 chr17 19309338 19309641 -66128839 + AluJo SINE Alu 1 289 -23 1327 215 37 100 chr17 19309641 19310043 -66128437 + MER67B LTR ERV1 147 409 -252 491 253 70 22 chr17 19310012 19310234 -66128246 + MER67D LTR ERV1 273 537 -6 * 1441 189 46 4 chr17 19310558 19310839 -66127641 - AluJo SINE Alu -19 293 1 198 291 51 43 chr17 19311873 19311990 -66126490 - MIR3 SINE MIR -83 125 8 738 278 44 9 chr17 19312085 19312312 -66126168 + MIR SINE MIR 16 250 -12 3792 191 41 50 chr17 19312350 19312391 -66126089 + L1MB2 LINE L1 5295 5335 -836 1979 120 0 7 chr17 19312391 19312699 -66125781 + AluY SINE Alu 1 306 -5 3792 191 41 50 chr17 19312699 19312966 -66125514 + L1MB2 LINE L1 5335 5603 -568 1515 173 55 0 chr17 19312966 19313238 -66125242 + AluJo SINE Alu 1 287 -25 3792 191 41 50 chr17 19313238 19313813 -66124667 + L1MB2 LINE L1 5603 6171 0 2216 88 3 0 chr17 19313819 19314114 -66124366 + AluSx SINE Alu 1 296 -16 929 299 170 22 chr17 19314361 19314496 -66123984 - L2 LINE L2 -1 3312 3198 1545 106 184 0 chr17 19314496 19314618 -66123862 + AluSq SINE Alu 1 99 -204 180 0 0 0 chr17 19314618 19314638 -66123842 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1545 106 184 0 chr17 19314638 19314771 -66123709 + AluSq SINE Alu 99 303 0 929 299 170 22 chr17 19314771 19315040 -66123440 - L2 LINE L2 -115 3198 2848 198 233 0 82 chr17 19315192 19315246 -66123234 + MIR SINE MIR 47 95 -167 701 174 102 12 chr17 19315246 19315413 -66123067 - MER5A DNA MER1_type -4 185 4 198 233 0 82 chr17 19315413 19315431 -66123049 + MIR SINE MIR 95 113 -149 502 208 48 40 chr17 19316080 19316205 -66122275 - L2 LINE L2 0 3313 3188 1187 228 116 4 chr17 19316474 19316750 -66121730 + MLT1B-int LTR MaLR 1060 1366 -5 2225 130 28 33 chr17 19316756 19317147 -66121333 + MLT1B LTR MaLR 2 390 0 2151 109 7 0 chr17 19317362 19317664 -66120816 + AluSq SINE Alu 1 304 -9 2117 97 0 0 chr17 19317815 19318094 -66120386 + AluSg SINE Alu 1 279 -31 216 0 0 0 chr17 19318098 19318122 -66120358 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 419 277 38 25 chr17 19319081 19319240 -66119240 - L2 LINE L2 -40 3273 3113 2361 81 3 0 chr17 19319241 19319549 -66118931 + AluSp SINE Alu 1 309 -4 2112 118 0 7 chr17 19319557 19319861 -66118619 + AluSx SINE Alu 1 302 -10 373 258 121 93 chr17 19320358 19320606 -66117874 + MLT1K LTR MaLR 312 566 -22 1601 221 104 27 chr17 19320606 19320643 -66117837 - MLT2B1 LTR ERVL 0 520 487 402 21 0 0 chr17 19320643 19320690 -66117790 + (TG)n Simple_repeat Simple_repeat 2 48 0 1601 221 104 27 chr17 19320690 19321132 -66117348 - MLT2B1 LTR ERVL -33 487 4 769 255 166 18 chr17 19321401 19321738 -66116742 - MLT1J2 LTR MaLR -2 448 62 1056 196 19 19 chr17 19321861 19322070 -66116410 - MER20 DNA MER1_type 0 219 11 1691 155 0 51 chr17 19322397 19322545 -66115935 + AluJo SINE Alu 1 126 -186 2218 92 3 0 chr17 19322545 19322838 -66115642 + AluSx SINE Alu 2 295 -17 1691 155 0 51 chr17 19322838 19323005 -66115475 + AluJo SINE Alu 126 300 -12 1804 158 7 3 chr17 19323697 19324000 -66114480 + AluJo SINE Alu 1 304 -8 277 305 84 108 chr17 19324299 19324764 -66113716 + L2 LINE L2 2809 3262 -10 1563 191 34 0 chr17 19324764 19325058 -66113422 + AluJo SINE Alu 1 304 -8 757 171 0 68 chr17 19325137 19325230 -66113250 - L1MB3 LINE L1 0 6183 6106 2157 83 35 0 chr17 19325230 19325518 -66112962 - AluSx SINE Alu -14 298 1 757 171 0 68 chr17 19325518 19325600 -66112880 - L1MB3 LINE L1 -77 6106 6020 376 216 51 25 chr17 19325600 19325718 -66112762 - L1MB2 LINE L1 -108 6063 5940 797 184 0 0 chr17 19325719 19325844 -66112636 - FLAM_C SINE Alu -17 126 2 3198 132 6 0 chr17 19325844 19326336 -66112144 - L1MB3 LINE L1 -208 5975 5481 2214 203 56 8 chr17 19326384 19326863 -66111617 + MLT1D LTR MaLR 2 503 -2 294 255 20 10 chr17 19326864 19326966 -66111514 + L1ME3A LINE L1 5305 5407 -763 1214 192 89 47 chr17 19326967 19327326 -66111154 - MLT1A2 LTR MaLR 0 374 1 1960 155 3 40 chr17 19327326 19327680 -66110800 - MLT1A2-int LTR MaLR 0 1735 1395 371 262 180 61 chr17 19327744 19327940 -66110540 + L1ME3A LINE L1 5470 5641 -529 2185 92 0 3 chr17 19327940 19328232 -66110248 + AluSc SINE Alu 1 291 -18 371 262 180 61 chr17 19328232 19328462 -66110018 + L1ME3A LINE L1 5641 5947 -223 333 270 75 44 chr17 19328507 19328666 -66109814 + L1MC5 LINE L1 7767 7930 -31 211 302 0 0 chr17 19329214 19329277 -66109203 - L3 LINE CR1 -717 860 798 1935 137 0 3 chr17 19329333 19329659 -66108821 + AluSx SINE Alu 1 312 0 2954 82 40 72 chr17 19329756 19329774 -66108706 - MER31A LTR ERV1 0 485 468 2384 47 7 13 chr17 19329774 19330074 -66108406 + AluY SINE Alu 1 298 -13 2954 82 40 72 chr17 19330074 19330093 -66108387 - MER31A LTR ERV1 -17 468 450 2090 152 76 17 chr17 19330093 19330501 -66107979 + MSTB1 LTR MaLR 1 432 0 2954 82 40 72 chr17 19330501 19330963 -66107517 - MER31A LTR ERV1 -35 450 1 354 143 0 0 chr17 19330987 19331064 -66107416 + (TG)n Simple_repeat Simple_repeat 2 78 0 739 157 114 24 chr17 19331214 19331380 -66107100 + MER5A DNA MER1_type 7 187 -2 2173 69 0 69 chr17 19331822 19332156 -66106324 - AluY SINE Alu 0 311 1 1876 144 0 14 chr17 19332348 19332640 -66105840 - AluJo SINE Alu -24 288 1 330 309 43 29 chr17 19332695 19332834 -66105646 + MIR SINE MIR 49 189 -73 2066 117 0 3 chr17 19332863 19333162 -66105318 - AluSc SINE Alu -11 298 1 1919 104 11 0 chr17 19333190 19333468 -66105012 - AluSq SINE Alu -32 281 1 22 35 0 0 chr17 19333547 19333576 -66104904 + AT_rich Low_complexity Low_complexity 1 29 0 244 275 25 50 chr17 19333949 19334029 -66104451 + L2 LINE L2 1866 1943 -1371 349 332 115 46 chr17 19334117 19334421 -66104059 - L2 LINE L2 -5 3267 2943 321 290 104 37 chr17 19334503 19334908 -66103572 - L2 LINE L2 -222 3050 2563 2118 99 0 7 chr17 19334932 19335226 -66103254 + AluSc SINE Alu 1 292 -17 1651 185 0 3 chr17 19335236 19335528 -66102952 + AluJb SINE Alu 1 291 -21 716 304 15 0 chr17 19335554 19335755 -66102725 + MIR SINE MIR 47 250 -12 2177 194 57 5 chr17 19335935 19336358 -66102122 + LTR40c LTR ERVL 1 445 -20 204 167 0 0 chr17 19336361 19336397 -66102083 - L2 LINE L2 -1081 2233 2198 774 150 79 7 chr17 19336415 19336555 -66101925 + FRAM SINE Alu 1 149 -27 516 261 40 86 chr17 19336636 19336939 -66101541 - L2 LINE L2 -1214 2100 1812 1790 152 7 14 chr17 19336950 19337246 -66101234 + AluJb SINE Alu 1 294 -18 336 143 0 0 chr17 19337271 19337327 -66101153 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 2746 114 10 22 chr17 19338079 19338319 -66100161 + MER31A LTR ERV1 1 242 -243 4309 128 71 6 chr17 19338319 19338993 -66099487 - LTR62 LTR ERVK -1 718 1 2746 114 10 22 chr17 19338993 19339243 -66099237 + MER31A LTR ERV1 242 485 0 473 305 23 11 chr17 19339897 19340071 -66098409 - MER5A DNA MER1_type -7 182 7 195 114 0 0 chr17 19340408 19340443 -66098037 + (CGGGG)n Simple_repeat Simple_repeat 5 39 0 29 47 0 0 chr17 19340443 19340486 -66097994 + GC_rich Low_complexity Low_complexity 1 43 0 29 28 0 0 chr17 19340520 19340556 -66097924 + GC_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr17 19340719 19340744 -66097736 + GC_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr17 19340795 19340817 -66097663 + GC_rich Low_complexity Low_complexity 1 22 0 37 62 0 0 chr17 19340926 19340991 -66097489 + GC_rich Low_complexity Low_complexity 1 65 0 185 333 16 0 chr17 19344049 19344112 -66094368 + MIR SINE MIR 84 147 -115 1566 162 29 11 chr17 19344933 19345205 -66093275 + AluJb SINE Alu 1 277 -35 525 58 0 0 chr17 19346966 19347035 -66091445 + (CA)n Simple_repeat Simple_repeat 1 69 0 1811 156 22 33 chr17 19347071 19347431 -66091049 - MLT1A1 LTR MaLR 0 365 10 21 36 0 0 chr17 19347686 19347714 -66090766 + AT_rich Low_complexity Low_complexity 1 28 0 2241 89 0 0 chr17 19348292 19348611 -66089869 - AluSc SINE Alu 0 319 1 232 315 101 0 chr17 19348753 19348842 -66089638 - L2 LINE L2 -2 3311 3214 451 265 94 39 chr17 19348910 19349091 -66089389 + MIR3 SINE MIR 4 194 -14 2332 88 3 0 chr17 19352011 19352317 -66086163 - AluSq SINE Alu -4 309 3 2420 126 25 0 chr17 19352318 19352794 -66085686 - MER1A DNA MER1_type 0 529 1 435 231 294 0 chr17 19353098 19353241 -66085239 - MER91A DNA MER1_type -11 185 1 213 345 95 0 chr17 19353724 19353840 -66084640 - L3b LINE CR1 -355 1228 1102 2156 132 7 0 chr17 19354181 19354491 -66083989 + AluSx SINE Alu 1 312 0 1937 114 33 127 chr17 19355369 19355482 -66082998 + MLT2D LTR ERVL 1 123 -291 1860 138 0 51 chr17 19355482 19355629 -66082851 + AluSx SINE Alu 1 125 -187 2588 49 0 0 chr17 19355629 19355934 -66082546 + AluY SINE Alu 1 305 -6 1860 138 0 51 chr17 19355934 19356098 -66082382 + AluSx SINE Alu 125 296 -16 1937 114 33 127 chr17 19356098 19356156 -66082324 + MLT2D LTR ERVL 123 185 -229 1502 142 9 139 chr17 19356156 19356288 -66082192 + AluJo SINE Alu 2 150 -152 2065 117 0 46 chr17 19356288 19356447 -66082033 - AluSx SINE Alu -19 293 128 183 42 0 0 chr17 19356447 19356471 -66082009 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2122 91 3 11 chr17 19356471 19356756 -66081724 - AluY SINE Alu -28 283 1 2065 117 0 46 chr17 19356756 19356902 -66081578 - AluSx SINE Alu -182 130 1 1502 142 9 139 chr17 19356902 19357115 -66081365 + AluJo SINE Alu 150 302 0 1937 114 33 127 chr17 19357115 19357398 -66081082 + MLT2D LTR ERVL 185 413 -1 181 228 158 79 chr17 19357424 19357525 -66080955 + MIR SINE MIR 37 145 -63 2424 62 3 10 chr17 19357647 19357954 -66080526 - AluY SINE Alu -6 305 1 302 273 68 0 chr17 19358384 19358472 -66080008 - MIR3 SINE MIR -41 167 74 198 0 0 0 chr17 19359515 19359537 -66078943 + (CA)n Simple_repeat Simple_repeat 1 22 0 307 326 23 30 chr17 19360439 19360571 -66077909 - L3 LINE CR1 -19 1558 1428 1487 164 44 49 chr17 19360573 19360938 -66077542 - L1MB3 LINE L1 -1 6182 5820 877 256 150 34 chr17 19361257 19361671 -66076809 - MLT1C LTR MaLR 0 467 6 446 252 0 19 chr17 19361752 19361859 -66076621 + MLT1C LTR MaLR 312 416 -51 805 191 0 0 chr17 19363783 19363924 -66074556 - FRAM SINE Alu -35 141 1 3905 160 22 25 chr17 19363927 19364615 -66073865 - L1MB2 LINE L1 -3 6168 5483 1045 131 0 0 chr17 19365359 19365512 -66072968 + FRAM SINE Alu 11 163 -13 807 204 45 23 chr17 19365523 19365743 -66072737 - Charlie1 DNA MER1_type -190 2571 2347 329 259 78 0 chr17 19367276 19367392 -66071088 - MIR3 SINE MIR -51 157 33 313 340 82 0 chr17 19368119 19368266 -66070214 - MIR SINE MIR -24 238 80 230 192 77 77 chr17 19369521 19369599 -66068881 - LTR48B LTR ERV1 -562 82 5 517 256 155 14 chr17 19370574 19370747 -66067733 + Charlie8 DNA MER1_type 41 249 -92 583 248 38 105 chr17 19370747 19370957 -66067523 + MER91A DNA MER1_type 1 196 0 517 256 155 14 chr17 19370957 19370990 -66067490 + Charlie8 DNA MER1_type 249 276 -65 232 382 32 0 chr17 19371926 19372049 -66066431 - MIR SINE MIR -107 155 29 1739 184 92 9 chr17 19372357 19372694 -66065786 - MLT1A1 LTR MaLR 0 365 1 487 305 85 36 chr17 19373084 19373503 -66064977 + L2 LINE L2 2797 3237 -76 975 204 160 85 chr17 19373713 19373897 -66064583 - MLT1F1 LTR MaLR -8 559 390 2198 80 3 20 chr17 19373897 19374198 -66064282 + AluSp SINE Alu 2 297 -16 975 204 160 85 chr17 19374198 19374332 -66064148 - MLT1F1 LTR MaLR -177 390 267 2157 119 6 6 chr17 19374332 19374644 -66063836 - AluSx SINE Alu 0 312 1 975 204 160 85 chr17 19374644 19374664 -66063816 - MLT1F1 LTR MaLR -300 267 250 1724 160 0 26 chr17 19374664 19374970 -66063510 - AluJo SINE Alu -1 311 14 975 204 160 85 chr17 19374970 19375151 -66063329 - MLT1F1 LTR MaLR -317 250 8 611 239 91 5 chr17 19375166 19375363 -66063117 - LTR33 LTR ERVL -307 214 1 1083 139 0 5 chr17 19376160 19376633 -66061847 + (TCC)n Simple_repeat Simple_repeat 1 650 0 227 286 32 0 chr17 19376772 19376835 -66061645 - MLT1K LTR MaLR -10 578 514 646 268 49 0 chr17 19376854 19377018 -66061462 + MIR SINE MIR 11 182 -80 1788 100 8 15 chr17 19377039 19377300 -66061180 + AluSx SINE Alu 34 292 -20 799 134 27 13 chr17 19377301 19377450 -66061030 - MER39 LTR ERV1 0 707 557 2257 96 0 16 chr17 19377460 19377772 -66060708 + AluSx SINE Alu 6 312 0 554 224 0 9 chr17 19377789 19377905 -66060575 + FLAM_A SINE Alu 25 139 -3 2176 112 3 6 chr17 19377965 19378278 -66060202 - AluSp SINE Alu -1 312 1 2129 114 7 3 chr17 19378280 19378579 -66059901 - AluSx SINE Alu -12 300 1 1137 180 167 0 chr17 19378582 19379009 -66059471 - MER39 LTR ERV1 -158 495 3 213 303 0 45 chr17 19379015 19379081 -66059399 + MIR SINE MIR 199 261 -1 214 256 37 49 chr17 19379128 19379210 -66059270 - MIR SINE MIR -65 197 117 468 91 0 0 chr17 19379324 19379390 -66059090 + (TG)n Simple_repeat Simple_repeat 2 67 0 2099 88 0 0 chr17 19379406 19379679 -66058801 - AluSg SINE Alu -37 273 1 409 157 92 105 chr17 19379891 19379954 -66058526 + MER5B DNA MER1_type 1 63 -115 2181 96 10 3 chr17 19379954 19380255 -66058225 + AluSg SINE Alu 1 303 -7 409 157 92 105 chr17 19380255 19380309 -66058171 + MER5B DNA MER1_type 63 118 -60 1503 175 32 23 chr17 19380309 19380618 -66057862 - AluJb SINE Alu 0 312 1 409 157 92 105 chr17 19380618 19380652 -66057828 + MER5B DNA MER1_type 118 151 -27 2179 52 38 10 chr17 19380652 19380942 -66057538 + AluY SINE Alu 1 298 -13 2239 105 0 6 chr17 19381036 19381350 -66057130 - AluSx SINE Alu 0 312 1 328 301 0 0 chr17 19382460 19382543 -66055937 + MIR SINE MIR 109 191 -71 2210 82 7 0 chr17 19382773 19383053 -66055427 + AluSx SINE Alu 3 284 -28 186 71 0 0 chr17 19383053 19383081 -66055399 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 799 269 66 4 chr17 19383186 19383413 -66055067 - MIR SINE MIR -20 242 2 1589 200 51 3 chr17 19383760 19384127 -66054353 - MLT1B LTR MaLR -4 424 1 321 258 129 16 chr17 19384253 19384377 -66054103 + L2 LINE L2 3176 3313 0 1789 109 28 0 chr17 19385102 19385350 -66053130 + AluSq SINE Alu 13 267 -46 855 264 199 13 chr17 19386091 19386478 -66052002 + L2 LINE L2 2814 3272 0 2194 122 0 0 chr17 19386479 19386782 -66051698 + AluSx SINE Alu 1 303 -9 227 279 29 15 chr17 19386804 19386872 -66051608 - MIR SINE MIR -154 108 40 1000 134 0 0 chr17 19587264 19587406 -65851074 + AluSg/x SINE Alu 156 297 -15 218 357 87 8 chr17 19587660 19587786 -65850694 - MIR SINE MIR -8 254 119 342 229 125 62 chr17 19587967 19588111 -65850369 - MIR SINE MIR -107 155 3 1590 118 9 64 chr17 19588290 19588619 -65849861 - AluSx SINE Alu -1 311 1 364 276 31 0 chr17 19589300 19589398 -65849082 - MIR SINE MIR -122 140 40 1678 127 39 18 chr17 19589988 19590297 -65848183 - AluSx SINE Alu 0 315 1 270 212 71 12 chr17 19591111 19591196 -65847284 + MLT1C LTR MaLR 17 106 -399 1023 145 100 104 chr17 19591212 19591325 -65847155 + AluJo SINE Alu 1 113 -199 2185 68 10 14 chr17 19591325 19591618 -65846862 - AluSq SINE Alu -21 292 1 2398 62 3 3 chr17 19591624 19591929 -65846551 - AluY SINE Alu -6 305 1 1023 145 100 104 chr17 19591929 19592077 -65846403 + AluJo SINE Alu 118 268 -44 941 207 12 0 chr17 19592123 19592287 -65846193 + FRAM SINE Alu 1 166 0 423 194 231 36 chr17 19592287 19592534 -65845946 + MLT1C LTR MaLR 173 467 0 22 56 0 0 chr17 19592658 19592694 -65845786 + AT_rich Low_complexity Low_complexity 1 36 0 1803 128 7 11 chr17 19592697 19592978 -65845502 + AluSg SINE Alu 1 280 -30 21 57 0 0 chr17 19593528 19593563 -65844917 + GC_rich Low_complexity Low_complexity 1 35 0 222 310 0 60 chr17 19593715 19593815 -65844665 + MIR SINE MIR 60 153 -109 226 333 29 29 chr17 19594599 19594704 -65843776 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 19594722 19594800 -65843680 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 19595132 19595184 -65843296 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 19595718 19595810 -65842670 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 19595944 19596048 -65842432 + MIR SINE MIR 17 121 -141 290 282 78 0 chr17 19596439 19596542 -65841938 - L2 LINE L2 -245 3027 2917 225 267 47 12 chr17 19597517 19597603 -65840877 - L2 LINE L2 -261 3011 2923 2123 103 3 7 chr17 19599021 19599312 -65839168 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 19599319 19599623 -65838857 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 19602322 19602427 -65836053 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 19603194 19603255 -65835225 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 19604277 19604320 -65834160 + AT_rich Low_complexity Low_complexity 1 43 0 2279 82 7 7 chr17 19604594 19604900 -65833580 + AluY SINE Alu 1 306 -5 483 285 66 86 chr17 19605759 19606127 -65832353 - L1MCa LINE L1 -2732 3694 2194 488 180 0 50 chr17 19606137 19606237 -65832243 + AluSg/x SINE Alu 194 288 -22 1787 116 0 4 chr17 19606327 19606569 -65831911 - AluSx SINE Alu -71 241 1 269 194 113 0 chr17 19606595 19606657 -65831823 + MIR3 SINE MIR 86 154 -54 2356 85 0 0 chr17 19607007 19607301 -65831179 - AluSg SINE Alu -16 294 1 1702 145 76 0 chr17 19607305 19607581 -65830899 - AluJb SINE Alu -15 297 1 1662 78 9 0 chr17 19607590 19607807 -65830673 - AluSg/x SINE Alu -9 303 85 2258 95 0 3 chr17 19607810 19608115 -65830365 - AluSg SINE Alu -6 304 1 187 333 156 0 chr17 19608700 19608790 -65829690 + L2 LINE L2 3189 3292 -21 1384 164 25 12 chr17 19608790 19609034 -65829446 - AluSx SINE Alu -11 301 55 233 322 116 39 chr17 19611492 19611725 -65826755 + L2 LINE L2 2804 3054 -218 2246 71 3 3 chr17 19611737 19612032 -65826448 - AluY SINE Alu -16 295 1 316 312 136 16 chr17 19614121 19614246 -65824234 + MIR3 SINE MIR 55 194 -14 1492 154 56 25 chr17 19614347 19614633 -65823847 - AluJo SINE Alu -17 295 1 1665 185 48 0 chr17 19614643 19614935 -65823545 - AluSx SINE Alu -6 306 1 2061 126 10 0 chr17 19614943 19615244 -65823236 - AluSp SINE Alu -9 304 1 729 185 0 8 chr17 19616268 19616387 -65822093 + FLAM_C SINE Alu 1 118 -25 2229 107 3 0 chr17 19616394 19616694 -65821786 - AluSc SINE Alu -8 301 1 29 0 0 0 chr17 19616695 19616724 -65821756 + AT_rich Low_complexity Low_complexity 1 29 0 2310 77 3 7 chr17 19617152 19617462 -65821018 - AluY SINE Alu -2 309 1 847 178 41 0 chr17 19617472 19617618 -65820862 - AluJb SINE Alu -23 289 138 868 9 0 18 chr17 19617626 19617737 -65820743 + (TCTA)n Simple_repeat Simple_repeat 1 109 0 1753 130 50 11 chr17 19617737 19618005 -65820475 - AluSx SINE Alu -30 282 1 1924 128 31 0 chr17 19619364 19619653 -65818827 - AluSx SINE Alu -14 298 1 2152 153 239 29 chr17 19622497 19622956 -65815524 + L1MC3 LINE L1 6906 7267 -518 1812 141 10 35 chr17 19622956 19623268 -65815212 + AluSx SINE Alu 1 304 -8 2152 153 239 29 chr17 19623268 19623527 -65814953 + L1MC3 LINE L1 7267 7775 -10 190 299 52 41 chr17 19623554 19623651 -65814829 + MIR SINE MIR 21 118 -90 799 227 0 0 chr17 19623652 19623802 -65814678 + AluJo SINE Alu 114 263 -49 2100 90 22 4 chr17 19625026 19625303 -65813177 + AluSx SINE Alu 1 282 -30 2291 33 0 60 chr17 19625802 19626103 -65812377 - AluY SINE Alu -28 283 1 802 141 0 8 chr17 19626106 19626234 -65812246 - AluJo/FLAM SINE Alu -181 131 5 234 282 239 8 chr17 19626236 19626353 -65812127 + MIR SINE MIR 119 262 0 194 320 100 10 chr17 19626417 19626517 -65811963 + L2 LINE L2 3186 3294 -19 263 278 56 0 chr17 19626565 19626655 -65811825 - MIR3 SINE MIR -53 155 61 266 319 11 0 chr17 19629744 19629838 -65808642 + MIR SINE MIR 58 152 -56 191 175 75 0 chr17 19629893 19629933 -65808547 - MIR SINE MIR -73 135 93 2212 104 0 0 chr17 19632377 19632674 -65805806 + AluSc SINE Alu 1 297 -12 813 128 0 0 chr17 19632681 19632988 -65805492 + AluSp SINE Alu 1 307 0 1595 209 36 25 chr17 19633010 19633369 -65805111 - MLT1A1 LTR MaLR -2 363 1 2217 85 0 7 chr17 19633545 19633839 -65804641 - AluSc SINE Alu -17 292 1 337 243 93 28 chr17 19634361 19634468 -65804012 + MIR SINE MIR 113 226 -36 1166 188 58 0 chr17 19635405 19635628 -65802852 + AluJo SINE Alu 1 236 -76 495 160 0 0 chr17 19635642 19635717 -65802763 - AluJ/FLAM SINE Alu -220 92 18 1836 152 10 10 chr17 19635736 19636038 -65802442 - AluSx SINE Alu -10 302 1 2236 179 63 72 chr17 19636336 19636895 -65801585 - MLT2B3 LTR ERVL 0 554 1 2299 64 0 0 chr17 19637283 19637598 -65800882 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 19640172 19640539 -65797941 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 19641660 19641953 -65796527 - AluSx SINE Alu -21 291 1 425 243 19 10 chr17 19643319 19643422 -65795058 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 19644129 19644183 -65794297 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 19646406 19646439 -65792041 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 19648719 19649024 -65789456 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 19649051 19649165 -65789315 - MIR3 SINE MIR -54 154 63 241 256 61 12 chr17 19650818 19650900 -65787580 + MIR SINE MIR 59 144 -118 214 333 14 0 chr17 19651768 19651837 -65786643 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 19652072 19652293 -65786187 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 19652294 19652640 -65785840 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 19652983 19653279 -65785201 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 19653710 19653762 -65784718 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 19654062 19654107 -65784373 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 19654151 19654180 -65784300 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 19654364 19654533 -65783947 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 268 207 44 44 chr17 19654762 19654897 -65783583 + (CCCGG)n Simple_repeat Simple_repeat 2 136 0 41 83 0 23 chr17 19655010 19655142 -65783338 + GC_rich Low_complexity Low_complexity 1 129 0 185 342 40 0 chr17 19655446 19655522 -65782958 + MIR SINE MIR 90 168 -94 212 352 48 0 chr17 19655552 19655677 -65782803 + L2 LINE L2 2894 3024 -248 398 317 32 0 chr17 19656215 19656338 -65782142 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 19656421 19656474 -65782006 + MIR SINE MIR 16 72 -136 1647 136 13 53 chr17 19656501 19656803 -65781677 + AluJb SINE Alu 1 290 -22 1683 123 105 7 chr17 19656803 19657088 -65781392 + AluSq SINE Alu 1 313 0 705 190 0 14 chr17 19657092 19657234 -65781246 + MIR SINE MIR 51 190 -72 2740 83 33 7 chr17 19657234 19657620 -65780860 + MER41A LTR ERV1 1 400 -154 2107 110 7 0 chr17 19657620 19657912 -65780568 + AluSp SINE Alu 1 294 -19 2740 83 33 7 chr17 19657912 19657944 -65780536 + MER41A LTR ERV1 400 430 -124 2205 132 0 0 chr17 19657947 19658258 -65780222 - AluSx SINE Alu 0 312 2 2136 114 0 25 chr17 19658270 19658585 -65779895 - AluY SINE Alu -4 307 1 220 228 166 48 chr17 19658885 19659030 -65779450 + MER5A DNA MER1_type 5 166 -23 405 290 39 91 chr17 19659582 19659725 -65778755 + MIR SINE MIR 31 159 -103 2135 93 0 3 chr17 19659725 19660016 -65778464 + AluY SINE Alu 1 290 -21 405 290 39 91 chr17 19660016 19660103 -65778377 + MIR SINE MIR 159 249 -13 1971 109 23 46 chr17 19660120 19660424 -65778056 + AluSg SINE Alu 1 297 -13 2115 103 6 58 chr17 19660440 19660575 -65777905 + AluSx SINE Alu 1 141 -171 1810 147 23 3 chr17 19660575 19660881 -65777599 + AluSq SINE Alu 2 313 0 2115 103 6 58 chr17 19660881 19661074 -65777406 + AluSx SINE Alu 141 312 0 274 295 66 43 chr17 19661843 19662014 -65776466 - MIR3 SINE MIR -17 191 16 249 180 33 16 chr17 19662226 19662287 -65776193 + MIR SINE MIR 102 163 -99 * 524 170 36 40 chr17 19662276 19662457 -65776023 - MIR SINE MIR -2 260 33 2292 75 0 40 chr17 19663182 19663504 -65774976 - AluSc SINE Alu 0 309 1 305 107 0 36 chr17 19663504 19663560 -65774920 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 2063 133 10 0 chr17 19663570 19663872 -65774608 - AluSq SINE Alu -8 305 1 199 185 169 0 chr17 19663903 19663968 -65774512 + L2 LINE L2 2671 2746 -568 1135 157 129 11 chr17 19663977 19664263 -65774217 - MER63 DNA MER1_type -1 1061 742 442 186 23 23 chr17 19664268 19664354 -65774126 - FRAM/FAM SINE Alu -90 86 1 387 184 29 0 chr17 19664371 19664474 -65774006 - Charlie5 DNA MER1_type -27 2585 2480 931 79 0 8 chr17 19664476 19664603 -65773877 - AluSg/x SINE Alu -8 304 179 731 152 74 29 chr17 19664628 19664650 -65773830 - MER33 DNA MER1_type -97 65 45 1664 139 65 24 chr17 19664650 19664944 -65773536 - AluSx SINE Alu -6 306 1 731 152 74 29 chr17 19664944 19665128 -65773352 - MER33 DNA MER1_type -117 45 1 227 140 18 0 chr17 19665121 19665148 -65773332 - MER63 DNA MER1_type -405 656 631 * 2195 96 20 3 chr17 19665148 19665449 -65773031 + AluY SINE Alu 1 306 -5 227 140 18 0 chr17 19665449 19665478 -65773002 - MER63 DNA MER1_type -430 631 599 799 133 25 0 chr17 19665764 19665884 -65772596 - AluSq/x SINE Alu -190 123 1 238 349 57 9 chr17 19666883 19666989 -65771491 + MIR SINE MIR 82 192 -70 2196 112 3 0 chr17 19666999 19667304 -65771176 - AluSx SINE Alu -6 306 1 298 308 108 15 chr17 19667808 19667938 -65770542 - MIR SINE MIR -73 189 48 2244 73 0 42 chr17 19668163 19668476 -65770004 - AluY SINE Alu -11 300 1 2152 122 0 0 chr17 19668482 19668785 -65769695 - AluSg SINE Alu -7 303 1 803 224 93 24 chr17 19669969 19670174 -65768306 + MER20 DNA MER1_type 1 219 0 349 371 114 15 chr17 19670305 19670577 -65767903 + L2 LINE L2 2969 3267 -5 291 326 155 5 chr17 19670572 19670759 -65767721 - MIR SINE MIR -1 261 47 * 28 0 0 0 chr17 19672155 19672183 -65766297 + AT_rich Low_complexity Low_complexity 1 28 0 327 121 0 0 chr17 19673183 19673241 -65765239 + (CGG)n Simple_repeat Simple_repeat 1 58 0 1767 115 42 11 chr17 19674701 19674988 -65763492 + AluJb SINE Alu 2 297 -15 201 147 0 0 chr17 19675284 19675318 -65763162 + (CCCCCT)n Simple_repeat Simple_repeat 5 38 0 1661 135 31 24 chr17 19675321 19675610 -65762870 - AluJb SINE Alu -21 291 1 916 237 66 0 chr17 19675635 19675846 -65762634 - MIR SINE MIR -15 247 23 197 328 103 60 chr17 19676479 19676781 -65761699 + L2 LINE L2 2466 2780 -534 2092 128 0 0 chr17 19676782 19677078 -65761402 - AluSx SINE Alu -16 296 1 2006 131 13 0 chr17 19677091 19677397 -65761083 - AluSx SINE Alu -2 310 1 180 359 16 0 chr17 19677592 19677656 -65760824 + L2 LINE L2 3249 3313 0 361 238 0 12 chr17 19677793 19677877 -65760603 - L2 LINE L2 -1 3312 3230 235 279 49 66 chr17 19677876 19677998 -65760482 + L2 LINE L2 2940 3059 -213 * 209 266 89 13 chr17 19678607 19678686 -65759794 - MIR SINE MIR -69 139 55 490 281 7 40 chr17 19678973 19679185 -65759295 + MIR SINE MIR 3 206 -56 2438 67 0 0 chr17 19679185 19679482 -65758998 - AluSc SINE Alu -12 297 1 611 294 92 0 chr17 19679754 19679938 -65758542 - MIR SINE MIR -19 243 43 246 250 40 50 chr17 19680115 19680215 -65758265 - MIR SINE MIR -65 143 45 311 299 255 10 chr17 19680235 19680439 -65758041 + L2 LINE L2 3019 3272 0 1089 275 154 16 chr17 19680560 19680682 -65757798 - L2 LINE L2 0 3313 3209 2298 144 52 80 chr17 19680682 19680736 -65757744 + MSTB LTR MaLR 1 55 -371 1958 120 40 3 chr17 19680736 19681035 -65757445 + AluSx SINE Alu 1 310 -2 2298 144 52 80 chr17 19681035 19681418 -65757062 + MSTB LTR MaLR 55 426 0 1089 275 154 16 chr17 19681418 19681731 -65756749 - L2 LINE L2 -104 3209 2818 1934 151 0 16 chr17 19681976 19682281 -65756199 + AluSx SINE Alu 1 300 -12 915 140 0 22 chr17 19682353 19682489 -65755991 + FLAM_C SINE Alu 1 133 0 1538 133 80 39 chr17 19682943 19683229 -65755251 - AluJo SINE Alu -11 301 4 525 174 37 37 chr17 19683877 19683986 -65754494 + MIR SINE MIR 34 142 -66 274 172 0 78 chr17 19683984 19684048 -65754432 - L2 LINE L2 -4 3309 3251 * 642 178 23 31 chr17 19684122 19684251 -65754229 - BC200 scRNA scRNA -60 140 13 1324 223 68 8 chr17 19684261 19684628 -65753852 + LTR16C LTR ERVL 100 488 -3 1797 141 67 48 chr17 19684646 19685022 -65753458 + MLT1B LTR MaLR 1 383 -7 616 302 6 12 chr17 19685026 19685195 -65753285 - MIR SINE MIR -40 222 55 367 287 11 0 chr17 19686123 19686217 -65752263 - MIR SINE MIR -97 165 71 451 309 179 0 chr17 19686621 19686822 -65751658 + MIR SINE MIR 16 252 -10 1673 146 3 44 chr17 19686901 19687242 -65751238 + AluJb SINE Alu 1 329 0 758 198 79 0 chr17 19687360 19687537 -65750943 + Charlie1b DNA MER1_type 72 262 -261 1148 114 0 34 chr17 19687574 19687750 -65750730 - AluJb SINE Alu -3 309 140 593 97 164 12 chr17 19687755 19687920 -65750560 + Charlie1b DNA MER1_type 277 466 -57 1134 137 0 0 chr17 19687922 19688083 -65750397 - AluSg/x SINE Alu -17 293 133 1968 118 3 14 chr17 19688093 19688407 -65750073 - AluSq SINE Alu 0 311 1 435 19 0 0 chr17 19688407 19688459 -65750021 + (TTA)n Simple_repeat Simple_repeat 2 53 0 2062 98 0 37 chr17 19688459 19688755 -65749725 - AluSq SINE Alu -28 285 1 282 125 107 0 chr17 19688757 19688813 -65749667 + Charlie1b DNA MER1_type 462 523 0 766 149 7 84 chr17 19688869 19688981 -65749499 + AluJo SINE Alu 1 99 -213 2330 77 3 13 chr17 19688981 19689291 -65749189 - AluY SINE Alu -4 307 1 766 149 7 84 chr17 19689291 19689332 -65749148 + AluJo SINE Alu 99 142 -170 217 176 20 0 chr17 19689378 19689429 -65749051 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 351 318 16 0 chr17 19689438 19689564 -65748916 - L1ME LINE L1 -340 5781 5654 371 285 32 81 chr17 19690284 19690470 -65748010 - MER5A DNA MER1_type -3 186 10 225 340 45 0 chr17 19691278 19691378 -65747102 + MIR SINE MIR 40 147 -61 610 212 30 86 chr17 19691823 19691854 -65746626 + MIR SINE MIR 74 105 -157 2821 151 44 42 chr17 19691854 19692358 -65746122 + MLT1D LTR MaLR 1 505 0 610 212 30 86 chr17 19692358 19692464 -65746016 + MIR SINE MIR 105 215 -47 1490 111 194 0 chr17 19692464 19692717 -65745763 - AluSp SINE Alu -11 302 1 1997 139 27 3 chr17 19692717 19693017 -65745463 - AluSx SINE Alu -4 308 1 610 212 30 86 chr17 19693017 19693075 -65745405 + MIR SINE MIR 213 260 -2 219 258 48 0 chr17 19693607 19693669 -65744811 - L2 LINE L2 -214 3058 2994 359 319 106 0 chr17 19693993 19694134 -65744346 + MIR SINE MIR 20 175 -87 2433 83 0 0 chr17 19694545 19694857 -65743623 - AluSx SINE Alu 0 312 1 431 239 80 0 chr17 19695066 19695204 -65743276 - MIR SINE MIR -65 197 49 1297 230 144 45 chr17 19696843 19697335 -65741145 + MLT1K LTR MaLR 48 588 0 252 302 0 0 chr17 19697335 19697402 -65741078 - MIR SINE MIR -64 144 86 215 83 0 0 chr17 19698532 19698567 -65739913 - MIR SINE MIR -115 147 114 338 329 16 13 chr17 19699938 19700102 -65738378 - MIR SINE MIR -33 175 27 263 293 22 89 chr17 19701074 19701232 -65737248 - L2 LINE L2 -284 2988 2841 390 250 67 0 chr17 19701906 19702010 -65736470 + MIR SINE MIR 35 145 -63 231 240 60 70 chr17 19703096 19703196 -65735284 + MIR3 SINE MIR 109 207 -1 29 0 0 0 chr17 19703842 19703871 -65734609 + AT_rich Low_complexity Low_complexity 1 29 0 2209 80 0 3 chr17 19703871 19704160 -65734320 - AluSq SINE Alu -25 288 1 1193 97 0 0 chr17 19704298 19704453 -65734027 - AluSc SINE Alu -154 155 1 621 278 167 29 chr17 19704455 19705029 -65733451 - L2 LINE L2 -27 3286 2658 * 684 261 22 0 chr17 19705020 19705200 -65733280 + MIR SINE MIR 9 192 -70 277 320 30 14 chr17 19707282 19707431 -65731049 - MIR SINE MIR -44 218 67 1144 146 12 0 chr17 19707599 19707770 -65730710 - FRAM SINE Alu -5 171 1 191 271 17 0 chr17 19708186 19708245 -65730235 + MIR SINE MIR 79 138 -70 205 321 45 75 chr17 19709898 19710032 -65728448 + MIR SINE MIR 14 143 -119 596 272 71 0 chr17 19710283 19710467 -65728013 - MIR SINE MIR -29 233 37 437 224 10 0 chr17 19710536 19710634 -65727846 - MIR SINE MIR -21 241 143 1838 155 0 17 chr17 19710635 19710932 -65727548 - AluJo SINE Alu -20 292 1 370 267 0 0 chr17 19710933 19711023 -65727457 - U13 snRNA snRNA -14 90 1 727 234 0 0 chr17 19711024 19711169 -65727311 - MIR SINE MIR -115 147 3 259 333 28 35 chr17 19711210 19711351 -65727129 - L3b LINE CR1 -170 1413 1274 1825 157 14 3 chr17 19711857 19712143 -65726337 - AluJb SINE Alu -23 289 1 391 276 92 51 chr17 19712511 19712728 -65725752 + L2 LINE L2 2967 3192 -80 21 0 0 0 chr17 19712753 19712774 -65725706 + AT_rich Low_complexity Low_complexity 1 21 0 215 310 86 0 chr17 19713167 19713284 -65725196 - MIR SINE MIR -62 146 44 219 328 0 0 chr17 19714184 19714245 -65724235 + GA-rich Low_complexity Low_complexity 6 66 0 363 305 202 15 chr17 19714467 19714670 -65723810 - MIR SINE MIR -2 260 20 348 205 13 13 chr17 19714954 19715032 -65723448 - MIR SINE MIR -79 129 52 261 152 0 0 chr17 19715205 19715251 -65723229 - L3 LINE CR1 -106 1471 1426 296 247 0 13 chr17 19716048 19716125 -65722355 - MER91B DNA MER1_type -28 162 87 226 321 71 27 chr17 19716138 19716250 -65722230 - MER91B DNA MER1_type -60 130 14 257 133 0 22 chr17 19716304 19716349 -65722131 - MER91B DNA MER1_type -152 44 1 275 307 0 59 chr17 19716595 19716696 -65721784 - MIR SINE MIR -88 174 80 190 258 91 30 chr17 19717199 19717265 -65721215 - L3 LINE CR1 -102 1475 1406 192 216 0 0 chr17 19718244 19718281 -65720199 - MIR SINE MIR -114 148 112 628 247 18 30 chr17 19718410 19718576 -65719904 - MIR SINE MIR -79 183 20 300 349 34 51 chr17 19719069 19719244 -65719236 + L2 LINE L2 3007 3178 -94 180 274 71 12 chr17 19719265 19719349 -65719131 - MIR SINE MIR -74 134 46 260 192 0 0 chr17 19719559 19719611 -65718869 - L3 LINE CR1 -111 1466 1415 1014 261 70 0 chr17 19720163 19720404 -65718076 + MIR SINE MIR 1 258 -4 196 282 109 55 chr17 19720618 19720728 -65717752 + L2 LINE L2 3197 3312 -1 554 268 78 52 chr17 19721356 19721587 -65716893 - L2 LINE L2 -117 3155 2919 2307 82 3 10 chr17 19721934 19722238 -65716242 + AluSp SINE Alu 1 302 -11 1293 95 0 0 chr17 19722238 19722407 -65716073 + AluSq SINE Alu 135 303 -10 1699 138 49 23 chr17 19722409 19722713 -65715767 + AluJo SINE Alu 1 312 0 875 139 0 53 chr17 19722823 19722974 -65715506 - FLAM_C SINE Alu 0 143 1 231 294 76 8 chr17 19723004 19723123 -65715357 + L1P LINE L1 4918 5044 -1102 21 36 0 0 chr17 19723188 19723216 -65715264 + AT_rich Low_complexity Low_complexity 1 28 0 2249 80 0 3 chr17 19723286 19723609 -65714871 + AluSc SINE Alu 1 322 0 1935 99 0 51 chr17 19723617 19723909 -65714571 + AluSx SINE Alu 1 277 -35 369 313 16 49 chr17 19723927 19724122 -65714358 + L1M4 LINE L1 5171 5367 -779 791 220 13 0 chr17 19724590 19724749 -65713731 - MIR SINE MIR 0 262 102 1174 288 40 19 chr17 19725472 19725899 -65712581 - L2 LINE L2 -25 3288 2853 453 19 0 0 chr17 19726699 19726753 -65711727 + (CA)n Simple_repeat Simple_repeat 2 55 0 456 265 262 16 chr17 19726992 19727377 -65711103 + L2 LINE L2 2833 3312 -1 2048 123 7 3 chr17 19727392 19727700 -65710780 + AluSc SINE Alu 1 309 0 531 226 153 15 chr17 19727767 19727904 -65710576 - MIR SINE MIR -18 244 89 242 280 11 75 chr17 19728074 19728167 -65710313 - MIR3 SINE MIR -47 161 75 275 290 253 20 chr17 19728301 19728598 -65709882 + MLT1K LTR MaLR 142 507 -81 363 328 46 0 chr17 19728786 19728917 -65709563 + MIR SINE MIR 108 244 -18 565 303 160 33 chr17 19729245 19729699 -65708781 + L2 LINE L2 2248 2643 -670 186 103 0 0 chr17 19729699 19729728 -65708752 + (TA)n Simple_repeat Simple_repeat 2 30 0 565 303 160 33 chr17 19729728 19729875 -65708605 + L2 LINE L2 2643 3313 0 2258 65 3 46 chr17 19731824 19732147 -65706333 - AluY SINE Alu -2 309 1 488 244 16 24 chr17 19732487 19732614 -65705866 + MIR SINE MIR 46 171 -91 463 297 152 12 chr17 19732679 19732844 -65705636 - MIR SINE MIR -44 218 31 194 295 114 48 chr17 19734968 19735073 -65703407 - MIR SINE MIR -70 192 81 22 0 0 0 chr17 19736306 19736328 -65702152 + GC_rich Low_complexity Low_complexity 1 22 0 330 244 28 44 chr17 19736652 19736832 -65701648 + G-rich Low_complexity Low_complexity 2 178 0 224 315 0 0 chr17 19738685 19738758 -65699722 + CT-rich Low_complexity Low_complexity 1 73 0 241 381 24 8 chr17 19739132 19739258 -65699222 - MIR SINE MIR -88 174 47 426 259 50 22 chr17 19739507 19739646 -65698834 + MIR3 SINE MIR 15 157 -51 266 341 77 0 chr17 19740111 19740202 -65698278 + MIR SINE MIR 51 148 -114 237 313 12 0 chr17 19740262 19740342 -65698138 + CT-rich Low_complexity Low_complexity 2 82 0 2157 121 3 0 chr17 19740613 19740919 -65697561 - AluSx SINE Alu -5 307 1 458 256 135 25 chr17 19741019 19741195 -65697285 - MIR SINE MIR -65 143 3 488 249 165 17 chr17 19741456 19741693 -65696787 - L2 LINE L2 0 3313 3042 1344 279 168 44 chr17 19741748 19741928 -65696552 - L2 LINE L2 -412 2902 2746 2106 123 3 0 chr17 19741928 19742221 -65696259 - AluSx SINE Alu -18 294 1 1344 279 168 44 chr17 19742221 19742997 -65695483 - L2 LINE L2 -568 2746 1827 2228 113 0 3 chr17 19743006 19743316 -65695164 + AluSq SINE Alu 1 309 -4 313 167 61 53 chr17 19743319 19743433 -65695047 + L1MB8 LINE L1 6064 6178 0 411 286 40 0 chr17 19743546 19743672 -65694808 + L1MC4a LINE L1 5768 5898 -1910 432 0 0 0 chr17 19743714 19743762 -65694718 + (TG)n Simple_repeat Simple_repeat 2 49 0 1784 150 66 0 chr17 19743792 19744078 -65694402 - AluSx SINE Alu -2 310 6 1352 176 83 7 chr17 19744128 19744406 -65694074 + AluJo SINE Alu 1 299 -13 2021 155 0 3 chr17 19744412 19744722 -65693758 + AluSx SINE Alu 2 310 -2 1703 163 0 41 chr17 19744850 19745144 -65693336 + AluSx SINE Alu 1 282 -30 222 328 144 8 chr17 19745650 19745775 -65692705 + MIR SINE MIR 86 227 -35 819 296 96 42 chr17 19746036 19746187 -65692293 - L2 LINE L2 0 3272 3131 1639 197 17 3 chr17 19746187 19746482 -65691998 - AluJo SINE Alu -9 303 5 819 296 96 42 chr17 19746482 19746823 -65691657 - L2 LINE L2 -141 3131 2776 244 260 27 0 chr17 19746834 19746907 -65691573 - MIR SINE MIR -12 250 176 544 239 142 13 chr17 19747030 19747185 -65691295 - MIR SINE MIR -75 187 13 189 128 21 43 chr17 19749037 19749084 -65689396 + L2 LINE L2 3016 3061 -211 204 171 0 0 chr17 19749163 19749198 -65689282 + L2 LINE L2 3254 3288 -25 1774 147 33 13 chr17 19750562 19750868 -65687612 + AluJo SINE Alu 1 312 0 192 267 100 40 chr17 19752358 19752508 -65685972 + L2 LINE L2 2922 3080 -192 2264 85 20 0 chr17 19754898 19755193 -65683287 - AluSg SINE Alu -9 301 1 183 42 0 0 chr17 19755815 19755839 -65682641 + (AGGTG)n Simple_repeat Simple_repeat 4 27 0 235 305 211 0 chr17 19756344 19756439 -65682041 - L3 LINE CR1 -32 1545 1431 573 265 19 49 chr17 19758139 19758341 -65680139 - MIR SINE MIR -25 237 41 333 306 77 15 chr17 19759800 19759959 -65678521 + MIR SINE MIR 31 196 -63 312 314 58 22 chr17 19760733 19760870 -65677610 + L2 LINE L2 2572 2713 -601 4197 181 113 2 chr17 19760870 19761832 -65676648 + L1MC3 LINE L1 6711 7779 -6 2262 90 0 19 chr17 19761833 19762145 -65676335 + AluSq SINE Alu 1 306 -7 1665 104 13 0 chr17 19762220 19762450 -65676030 + AluSq SINE Alu 2 234 -79 2501 70 3 0 chr17 19762528 19762840 -65675640 - AluSp SINE Alu 0 313 1 826 262 182 31 chr17 19762844 19763347 -65675133 + L2 LINE L2 2737 3313 0 186 361 25 58 chr17 19763852 19763915 -65674565 + L2 LINE L2 2724 2788 -526 2264 91 7 0 chr17 19763915 19764212 -65674268 + AluSp SINE Alu 1 299 -14 186 361 25 58 chr17 19764212 19764251 -65674229 + L2 LINE L2 2788 2827 -487 2635 242 67 27 chr17 19764251 19765002 -65673478 + MER20B DNA MER1_type 1 781 -3 186 361 25 58 chr17 19765002 19765066 -65673414 + L2 LINE L2 2827 2883 -431 1312 184 88 32 chr17 19765066 19765349 -65673131 - AluJo SINE Alu -13 299 1 186 361 25 58 chr17 19765349 19765421 -65673059 + L2 LINE L2 2883 2956 -358 23 0 0 0 chr17 19965541 19965564 -65472916 + AT_rich Low_complexity Low_complexity 1 23 0 2389 98 0 0 chr17 19965564 19965860 -65472620 + AluSg SINE Alu 1 296 -14 2770 201 41 60 chr17 19965903 19966800 -65471680 - L1MDa LINE L1 -4402 2138 1259 2974 0 0 0 chr17 19966822 19967162 -65471318 + AluY SINE Alu 1 340 0 21 0 0 0 chr17 19967364 19967385 -65471095 + AT_rich Low_complexity Low_complexity 1 21 0 1966 103 0 94 chr17 19967542 19967672 -65470808 + AluSx SINE Alu 14 155 -157 2289 114 13 0 chr17 19967672 19967980 -65470500 + AluSx SINE Alu 1 312 0 1966 103 0 94 chr17 19967980 19968160 -65470320 + AluSx SINE Alu 155 296 -16 2526 93 0 0 chr17 19968160 19968471 -65470009 + AluSx SINE Alu 1 311 -1 2332 100 10 0 chr17 19968644 19968953 -65469527 + AluSp SINE Alu 1 312 -1 302 245 68 68 chr17 19968981 19969144 -65469336 + L1MDa LINE L1 2441 2603 -3937 1480 101 10 10 chr17 19969155 19969362 -65469118 + AluSc SINE Alu 1 207 -102 2530 63 0 0 chr17 19969467 19969766 -65468714 - AluY SINE Alu -12 299 1 322 250 24 24 chr17 19969782 19969866 -65468614 - MLT1K LTR MaLR -92 496 413 507 33 0 0 chr17 19970302 19970363 -65468117 + (TA)n Simple_repeat Simple_repeat 2 62 0 3226 178 13 7 chr17 19970817 19971372 -65467108 - MER68 LTR ERV1 -4 558 1 2899 226 76 25 chr17 19971568 19972400 -65466080 + L1MC4 LINE L1 6694 7567 -475 480 77 0 0 chr17 19973312 19973377 -65465103 + (TA)n Simple_repeat Simple_repeat 1 65 0 2380 69 3 20 chr17 19973752 19974058 -65464422 - AluY SINE Alu -6 305 5 629 289 83 49 chr17 19974230 19974579 -65463901 + MLT1K LTR MaLR 75 435 -153 2161 74 70 0 chr17 19975023 19975294 -65463186 - AluSc SINE Alu -19 290 1 2226 102 7 0 chr17 19975513 19975808 -65462672 - AluSp SINE Alu -16 297 1 410 269 77 66 chr17 19976700 19976882 -65461598 - MIR SINE MIR -56 206 23 2314 86 0 10 chr17 19977090 19977392 -65461088 - AluSq SINE Alu -14 299 1 2310 100 25 0 chr17 19977392 19977713 -65460767 - L1P4 LINE L1 -394 5772 5444 306 289 283 11 chr17 19978131 19978318 -65460162 - MIR SINE MIR -11 251 14 949 222 93 15 chr17 19978389 19978659 -65459821 - L1M4 LINE L1 -1736 4410 4120 206 118 0 0 chr17 19978661 19978695 -65459785 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 211 157 56 56 chr17 19979002 19979110 -65459370 + (GCTTG)n Simple_repeat Simple_repeat 4 111 0 948 62 0 0 chr17 19979858 19979971 -65458509 + AluSg SINE Alu 1 113 -197 355 310 0 0 chr17 19980147 19980309 -65458171 + AluY SINE Alu 173 334 0 1487 254 114 36 chr17 19980309 19980832 -65457648 - L1MDb LINE L1 -5293 1116 635 420 37 0 0 chr17 19980832 19980886 -65457594 + (TG)n Simple_repeat Simple_repeat 2 55 0 1487 254 114 36 chr17 19980886 19981316 -65457164 - L1MDb LINE L1 -5774 635 16 265 290 43 38 chr17 19981368 19981592 -65456888 + L1MC4a LINE L1 2517 2742 -3404 1082 177 51 55 chr17 19981649 19981698 -65456782 - MER33 DNA MER1_type -2275 310 262 2467 60 0 3 chr17 19981698 19981996 -65456484 - AluY SINE Alu -14 297 1 1082 177 51 55 chr17 19981996 19982257 -65456223 - MER33 DNA MER1_type -2323 262 1 501 297 148 58 chr17 19982263 19982647 -65455833 + L1MC4a LINE L1 2786 3134 -3012 2177 109 0 7 chr17 19982647 19982930 -65455550 + AluSx SINE Alu 1 281 -31 501 297 148 58 chr17 19982930 19983464 -65455016 + L1MC4a LINE L1 3134 3759 -2387 1975 47 0 8 chr17 19983501 19983737 -65454743 - AluY SINE Alu -77 234 1 2154 104 0 57 chr17 19983739 19984055 -65454425 - AluY SINE Alu -13 298 1 1669 140 4 0 chr17 19984066 19984309 -65454171 - AluSx SINE Alu -8 304 61 2326 85 7 26 chr17 19984891 19985197 -65453283 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr17 19989646 19989667 -65448813 + GC_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr17 19989751 19989773 -65448707 + (CCG)n Simple_repeat Simple_repeat 2 23 0 622 233 27 53 chr17 19989899 19989995 -65448485 + Charlie1 DNA MER1_type 2506 2603 -158 783 188 0 0 chr17 19989995 19990128 -65448352 - FLAM_C SINE Alu 0 133 1 622 233 27 53 chr17 19990128 19990293 -65448187 + Charlie1 DNA MER1_type 2603 2760 -1 382 330 142 42 chr17 19990296 19990945 -65447535 - L2 LINE L2 -436 2878 2165 2473 64 0 3 chr17 19991061 19991356 -65447124 + AluY SINE Alu 2 295 -16 715 239 61 0 chr17 19991456 19991636 -65446844 + MER58A DNA MER1_type 30 220 -4 399 279 33 16 chr17 19991638 19991760 -65446720 + MER102a DNA MER1_type 205 328 -2 315 325 105 4 chr17 19992305 19992533 -65445947 + L1MC4a LINE L1 4738 4988 -1158 25 51 0 0 chr17 19992617 19992656 -65445824 + AT_rich Low_complexity Low_complexity 1 39 0 462 233 96 44 chr17 19992674 19992983 -65445497 + L1MC4a LINE L1 5189 5503 -661 351 256 15 58 chr17 19993120 19993257 -65445223 + L1ME3A LINE L1 5769 5899 -271 1138 96 0 13 chr17 19993403 19993560 -65444920 - AluSg/x SINE Alu 0 312 158 358 167 0 15 chr17 19993761 19993827 -65444653 - MER58 DNA MER1_type 0 2420 2356 1719 163 55 23 chr17 19993842 19994149 -65444331 + MLT1A1 LTR MaLR 19 335 -30 659 273 6 36 chr17 19994162 19994327 -65444153 - MER58A DNA MER1_type 0 160 1 225 94 0 0 chr17 19994386 19994418 -65444062 + (T)n Simple_repeat Simple_repeat 1 32 0 2249 158 80 5 chr17 19994424 19994822 -65443658 + MSTA LTR MaLR 1 428 0 2443 82 0 7 chr17 19995323 19995626 -65442854 + AluY SINE Alu 2 302 -9 870 284 48 34 chr17 19998008 19998423 -65440057 + L1MC4a LINE L1 5647 6067 -1741 295 250 0 0 chr17 19998755 19998827 -65439653 - L2 LINE L2 -5 3308 3237 566 262 33 71 chr17 19998881 19999091 -65439389 + MIR SINE MIR 56 257 -5 3224 207 65 10 chr17 19999143 20000244 -65438236 + Charlie1a DNA MER1_type 5 1228 -227 29 0 0 0 chr17 20001193 20001222 -65437258 + AT_rich Low_complexity Low_complexity 1 29 0 1738 75 5 0 chr17 20001321 20001535 -65436945 - AluSp SINE Alu -14 299 85 1133 75 0 0 chr17 20004104 20004237 -65434243 - AluSq/x SINE Alu -180 133 1 647 286 35 5 chr17 20004292 20004495 -65433985 + L1ME LINE L1 5440 5648 -514 213 121 0 0 chr17 20005146 20005179 -65433301 + (A)n Simple_repeat Simple_repeat 1 33 0 575 306 120 73 chr17 20005964 20006481 -65431999 + MLT1K LTR MaLR 46 586 -2 2243 102 14 0 chr17 20006687 20006982 -65431498 - AluSx SINE Alu -13 299 1 2129 128 3 0 chr17 20007076 20007373 -65431107 - AluY SINE Alu -13 298 1 223 264 83 58 chr17 20008359 20008480 -65430000 + MER5A DNA MER1_type 44 167 -22 453 347 76 18 chr17 20010163 20010506 -65427974 + L2 LINE L2 2391 2753 -561 1410 233 108 12 chr17 20010552 20011026 -65427454 + MLT1E LTR MaLR 21 578 -15 360 290 180 5 chr17 20011490 20011707 -65426773 + HAL1 LINE L1 1240 1494 -1013 2674 43 3 0 chr17 20011861 20012166 -65426314 + AluY SINE Alu 1 306 -5 190 286 0 0 chr17 20012875 20012931 -65425549 + L2 LINE L2 3258 3313 0 2134 147 70 0 chr17 20012974 20013348 -65425132 - L1MA4A LINE L1 -10 6293 5894 1894 128 23 7 chr17 20013476 20013782 -65424698 + AluY SINE Alu 1 311 0 973 327 72 28 chr17 20013828 20014483 -65423997 + L2 LINE L2 2019 2702 -612 794 186 0 0 chr17 20014495 20014624 -65423856 - FLAM_C SINE Alu 0 133 5 401 253 24 41 chr17 20014639 20014659 -65423821 - L1MA10 LINE L1 -2 6332 6313 1809 211 18 23 chr17 20014659 20015099 -65423381 - L1ME2 LINE L1 -9 6224 5787 332 248 43 34 chr17 20015102 20015219 -65423261 - L1ME2 LINE L1 -3992 2404 2287 1721 224 89 36 chr17 20015344 20015791 -65422689 + Charlie1a DNA MER1_type 1 471 -984 434 179 73 24 chr17 20015802 20015925 -65422555 - MER69 DNA AcHobo -206 2320 2192 770 138 40 13 chr17 20016033 20016185 -65422295 - L1MC3 LINE L1 -97 7688 7533 894 299 24 6 chr17 20016308 20016649 -65421831 - L1ME2 LINE L1 -6014 382 36 546 279 128 23 chr17 20016664 20016883 -65421597 + L2 LINE L2 2702 2943 -371 248 252 89 0 chr17 20017150 20017285 -65421195 + L1P LINE L1 5255 5401 -750 38 22 0 0 chr17 20017302 20017347 -65421133 + AT_rich Low_complexity Low_complexity 1 45 0 262 214 143 0 chr17 20017350 20017420 -65421060 + L1MC4a LINE L1 5482 5561 -560 304 259 56 5 chr17 20017505 20017702 -65420778 + L1MC4a LINE L1 5707 5824 -297 1138 170 9 5 chr17 20018026 20018238 -65420242 - MER20 DNA MER1_type -5 214 2 274 360 40 0 chr17 20018802 20018902 -65419578 + MIR3 SINE MIR 94 197 -11 1587 194 11 7 chr17 20020694 20020997 -65417483 + AluJo SINE Alu 2 305 0 2474 76 0 0 chr17 20022328 20022619 -65415861 + AluSc SINE Alu 3 293 -16 568 229 113 85 chr17 20022680 20023033 -65415447 + LTR52 LTR ERVL 1 363 -58 326 263 50 40 chr17 20023976 20024075 -65414405 - L1MC4 LINE L1 -1339 6703 6604 605 312 50 74 chr17 20024107 20024316 -65414164 + L2 LINE L2 2113 2325 -989 1009 145 177 0 chr17 20024316 20024502 -65413978 - MER20 DNA MER1_type 0 219 1 605 312 50 74 chr17 20024502 20024647 -65413833 + L2 LINE L2 2325 2456 -858 2668 42 0 3 chr17 20024647 20024954 -65413526 - AluY SINE Alu -5 306 1 605 312 50 74 chr17 20024954 20025059 -65413421 + L2 LINE L2 2456 2562 -752 2572 56 0 7 chr17 20026155 20026457 -65412023 + AluY SINE Alu 1 300 -11 953 256 120 21 chr17 20026572 20026947 -65411533 + MLT1J1 LTR MaLR 15 426 -20 2733 48 0 0 chr17 20027496 20027807 -65410673 + AluY SINE Alu 1 311 0 249 271 29 14 chr17 20029101 20029171 -65409309 - MIR3 SINE MIR -17 191 121 350 193 80 23 chr17 20029344 20029432 -65409048 + L2 LINE L2 3180 3272 0 555 265 176 20 chr17 20029811 20030015 -65408465 + MIR SINE MIR 22 257 -5 193 0 472 0 chr17 20030740 20030776 -65407704 - MIR SINE MIR -123 139 87 236 296 141 3 chr17 20031288 20031415 -65407065 + MIR3 SINE MIR 4 144 -78 435 253 71 18 chr17 20031434 20031604 -65406876 - MIR SINE MIR 0 262 84 314 159 32 0 chr17 20032198 20032261 -65406219 + AluYb8 SINE Alu 244 308 0 2175 82 14 10 chr17 20032300 20032593 -65405887 - AluSx SINE Alu -18 294 1 1246 122 56 49 chr17 20032593 20032833 -65405647 - L1M2c LINE L1 -4824 1965 1721 2404 65 0 62 chr17 20032833 20033156 -65405324 - AluY SINE Alu -8 303 1 1246 122 56 49 chr17 20033156 20033203 -65405277 - L1M2c LINE L1 -5068 1721 1676 1414 104 5 5 chr17 20033303 20033496 -65404984 + AluSq SINE Alu 104 296 -17 4943 238 20 52 chr17 20033497 20035208 -65403272 - L1M2c LINE L1 -5353 1436 14 338 270 71 48 chr17 20035275 20035401 -65403079 - L1M4 LINE L1 -2196 3950 3822 2380 102 3 0 chr17 20035431 20035734 -65402746 + AluSx SINE Alu 1 304 -8 2079 99 0 64 chr17 20035745 20036059 -65402421 + AluY SINE Alu 1 294 -17 1017 278 47 23 chr17 20037614 20038085 -65400395 + L1MC4 LINE L1 7556 8037 -5 2251 78 0 0 chr17 20038249 20038565 -65399915 - AluY SINE Alu 0 316 1 2064 65 34 71 chr17 20038592 20038915 -65399565 - AluY SINE Alu 0 311 1 1297 78 0 12 chr17 20039085 20039252 -65399228 - AluSp SINE Alu -7 306 142 1999 114 0 14 chr17 20039252 20039533 -65398947 - AluSq SINE Alu -36 277 1 430 298 73 29 chr17 20039538 20039743 -65398737 + L1ME3A LINE L1 5360 5573 -589 1002 122 37 16 chr17 20039857 20040046 -65398434 - L1MA8 LINE L1 -71 6220 6028 1130 282 50 43 chr17 20040065 20040290 -65398190 + L1ME3A LINE L1 5600 5822 -348 2425 82 0 7 chr17 20040290 20040595 -65397885 + AluY SINE Alu 1 303 -8 1130 282 50 43 chr17 20040595 20040926 -65397554 + L1ME3A LINE L1 5822 6160 -10 569 245 98 16 chr17 20041514 20041800 -65396680 - MLT2F LTR ERVL -86 577 204 297 0 0 0 chr17 20041803 20041836 -65396644 + (TG)n Simple_repeat Simple_repeat 1 33 0 239 314 14 0 chr17 20043219 20043289 -65395191 + (CACG)n Simple_repeat Simple_repeat 2 72 0 242 145 16 65 chr17 20043589 20043651 -65394829 - SN5 Other centromeric -77 378 320 265 195 0 23 chr17 20044100 20044187 -65394293 - HSAT5 Satellite Satellite -1 85 1 298 230 0 29 chr17 20044218 20044319 -65394161 - HSAT5 Satellite Satellite -1 98 1 198 0 0 0 chr17 20049721 20049743 -65388737 + (TTCC)n Simple_repeat Simple_repeat 1 22 0 907 322 43 27 chr17 20050293 20050960 -65387520 + L1MC3 LINE L1 5479 6156 -1629 212 314 13 33 chr17 20052881 20053034 -65385446 + (CGGG)n Simple_repeat Simple_repeat 3 152 0 28 0 0 0 chr17 20054082 20054110 -65384370 + AT_rich Low_complexity Low_complexity 1 28 0 789 212 20 6 chr17 20054209 20054511 -65383969 - MLT1A2 LTR MaLR 0 374 1 651 172 83 30 chr17 20055045 20055214 -65383266 + MER3 DNA MER1_type 19 196 -13 2218 119 23 0 chr17 20055409 20055711 -65382769 + AluSg SINE Alu 1 309 -1 1116 98 7 0 chr17 20055784 20055937 -65382543 - AluSg/x SINE Alu 0 312 159 1635 201 0 3 chr17 20056018 20056312 -65382168 - AluJb SINE Alu -15 297 5 22 70 0 0 chr17 20056559 20056602 -65381878 + AT_rich Low_complexity Low_complexity 1 43 0 2195 105 7 3 chr17 20056608 20056904 -65381576 - AluSx SINE Alu -15 297 1 189 74 0 0 chr17 20057173 20057200 -65381280 + (CA)n Simple_repeat Simple_repeat 2 28 0 1131 133 0 0 chr17 20057928 20058086 -65380394 + AluSp SINE Alu 138 295 -18 194 0 39 0 chr17 20058750 20058776 -65379704 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1813 99 0 12 chr17 20060227 20060469 -65378011 - AluSq SINE Alu -74 239 1 1812 130 47 0 chr17 20063988 20064264 -65374216 + AluY SINE Alu 13 301 -10 712 294 17 0 chr17 20064889 20065066 -65373414 - MIR SINE MIR -3 259 80 213 346 86 25 chr17 20065129 20065291 -65373189 + MER5B DNA MER1_type 7 178 0 185 355 58 16 chr17 20065443 20065564 -65372916 + L2 LINE L2 3143 3268 -4 1197 211 132 19 chr17 20065911 20066176 -65372304 + AluJo SINE Alu 1 295 -7 1551 182 0 14 chr17 20066190 20066470 -65372010 + AluJb SINE Alu 16 291 -21 322 256 13 32 chr17 20066649 20066805 -65371675 + GA-rich Low_complexity Low_complexity 2 154 0 1801 130 3 42 chr17 20068532 20068840 -65369640 - AluY SINE Alu -5 306 11 23 0 0 0 chr17 20068996 20069019 -65369461 + AT_rich Low_complexity Low_complexity 1 23 0 409 295 15 25 chr17 20069096 20069296 -65369184 - L1ME4a LINE L1 -194 5927 5730 225 0 0 0 chr17 20069349 20069374 -65369106 + (TG)n Simple_repeat Simple_repeat 2 26 0 743 239 6 19 chr17 20069377 20069536 -65368944 - AluJo SINE Alu -31 281 125 241 208 104 31 chr17 20069542 20069638 -65368842 - L1ME4a LINE L1 -439 5682 5580 1417 184 0 12 chr17 20069898 20070153 -65368327 + AluSx SINE Alu 1 252 -60 469 230 0 0 chr17 20070263 20070350 -65368130 - AluJb SINE Alu -90 222 136 926 147 40 6 chr17 20070353 20070530 -65367950 - L1MA5 LINE L1 0 6300 6118 1124 130 0 6 chr17 20070540 20070702 -65367778 + AluSg/x SINE Alu 136 296 -16 2781 141 23 51 chr17 20070702 20071233 -65367247 - L1MA5 LINE L1 -192 6108 5593 3827 178 27 47 chr17 20071625 20072657 -65365823 - L1MA5 LINE L1 -692 5608 4600 5078 144 14 20 chr17 20072699 20074335 -65364145 - L1PA16 LINE L1 -1 6816 5200 180 0 0 0 chr17 20074335 20074355 -65364125 + (T)n Simple_repeat Simple_repeat 1 20 0 412 245 182 0 chr17 20075267 20075426 -65363054 + LTR50 LTR ERVL 1 188 -607 312 241 126 11 chr17 20075513 20075687 -65362793 + LTR33A LTR ERVL 323 516 -7 7744 243 48 53 chr17 20076158 20076694 -65361786 - L1PA16 LINE L1 -1575 5222 4685 749 195 0 47 chr17 20076694 20076843 -65361637 - FLAM_C SINE Alu 0 143 2 7744 243 48 53 chr17 20076843 20077633 -65360847 - L1PA16 LINE L1 -2112 4685 3893 222 37 0 0 chr17 20077633 20077660 -65360820 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 7744 243 48 53 chr17 20077660 20080046 -65358434 - L1PA16 LINE L1 -2904 3893 1362 2428 127 0 12 chr17 20080709 20081047 -65357433 + MER1B DNA MER1_type 4 337 0 309 323 6 49 chr17 20081146 20081310 -65357170 - L1PA16 LINE L1 -5268 1519 1363 * 1016 332 31 38 chr17 20081308 20081922 -65356558 - L1PA16 LINE L1 -6177 610 1 1329 200 33 87 chr17 20081943 20082424 -65356056 - L1MDa LINE L1 -1536 5004 4550 * 6640 233 85 26 chr17 20082415 20083650 -65354830 - L1 LINE L1 -2399 4809 3648 182 37 37 0 chr17 20083650 20083677 -65354803 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 6640 233 85 26 chr17 20083677 20084202 -65354278 - L1 LINE L1 -3560 3648 3155 1935 162 0 13 chr17 20084202 20084517 -65353963 - AluSx SINE Alu -1 311 1 6640 233 85 26 chr17 20084517 20086454 -65352026 - L1 LINE L1 -4053 3155 841 869 235 5 0 chr17 20086546 20086756 -65351724 - L1 LINE L1 -6628 581 13 251 282 0 14 chr17 20087916 20087987 -65350493 + Tigger5 DNA MER2_type 2249 2318 -5 357 250 0 25 chr17 20088005 20088085 -65350395 - Tigger5 DNA MER2_type -2244 79 2 1200 283 142 20 chr17 20088461 20088954 -65349526 - MLT1G1 LTR MaLR 0 595 2 2123 81 19 42 chr17 20089703 20090011 -65348469 + AluY SINE Alu 1 301 -10 1196 188 48 45 chr17 20091978 20092292 -65346188 - L1MDa LINE L1 -2148 5060 4746 1153 111 7 0 chr17 20092312 20092465 -65346015 - AluSq SINE Alu -159 154 1 365 239 23 0 chr17 20092520 20092608 -65345872 - MER66A LTR ERV1 -141 337 248 639 232 0 7 chr17 20092608 20092746 -65345734 - L1MDa LINE L1 -2506 4702 4566 1725 230 99 48 chr17 20092935 20093415 -65345065 - L1MDa LINE L1 -2652 4556 4027 2060 104 20 7 chr17 20093415 20093713 -65344767 - AluSg SINE Alu -8 302 1 1725 230 99 48 chr17 20093713 20093942 -65344538 - L1MDa LINE L1 -3181 4027 3811 864 195 29 75 chr17 20093942 20094183 -65344297 - L1MB8 LINE L1 0 6178 5949 * 912 220 41 8 chr17 20094163 20094408 -65344072 - L1MDa LINE L1 -3391 3817 3565 9186 180 98 73 chr17 20094418 20094570 -65343910 - L1MDa LINE L1 -3890 3499 3352 1872 140 17 20 chr17 20094570 20094870 -65343610 - AluSx SINE Alu -13 299 1 9186 180 98 73 chr17 20094870 20096259 -65342221 - L1MDa LINE L1 -4037 3352 1998 2256 77 3 27 chr17 20096259 20096556 -65341924 - AluSp SINE Alu -23 290 1 9186 180 98 73 chr17 20096556 20096634 -65341846 - L1MDa LINE L1 -5391 1998 1923 2338 76 13 7 chr17 20096634 20096938 -65341542 - AluY SINE Alu -5 306 1 9186 180 98 73 chr17 20096938 20098035 -65340445 - L1MDa LINE L1 -5466 1923 669 330 353 72 7 chr17 20098092 20098245 -65340235 - L1MC4 LINE L1 -478 7564 7402 1390 278 88 8 chr17 20098281 20098778 -65339702 - L1MC4 LINE L1 -722 7320 6784 225 360 80 8 chr17 20098927 20099052 -65339428 + L2 LINE L2 3125 3258 -14 461 261 118 17 chr17 20100238 20100505 -65337975 - L1MB8 LINE L1 -303 5881 5576 714 187 8 8 chr17 20101135 20101258 -65337222 - FLAM_A SINE Alu -10 123 1 30 45 0 0 chr17 20101268 20101312 -65337168 + AT_rich Low_complexity Low_complexity 1 44 0 893 293 180 20 chr17 20101428 20102063 -65336417 - L2 LINE L2 -1 3312 2574 438 305 112 34 chr17 20102192 20102619 -65335861 - HAL1b LINE L1 -772 576 107 2059 73 0 0 chr17 20102619 20102867 -65335613 - AluY SINE Alu -21 290 43 438 305 112 34 chr17 20102867 20102911 -65335569 - HAL1b LINE L1 -1241 107 68 2524 64 0 0 chr17 20103149 20103445 -65335035 - AluY SINE Alu -15 296 1 1839 131 60 0 chr17 20103637 20103920 -65334560 + AluJo SINE Alu 1 300 -12 925 244 47 73 chr17 20104074 20104330 -65334150 - L1MC4 LINE L1 -2156 5652 5410 565 170 198 0 chr17 20104330 20104436 -65334044 + FLAM_A SINE Alu 1 127 -6 925 244 47 73 chr17 20104436 20104588 -65333892 - L1MC4 LINE L1 -2398 5410 5255 356 281 119 73 chr17 20104702 20104819 -65333661 - L1MC4 LINE L1 -1014 5132 5022 2212 97 23 7 chr17 20104819 20105127 -65333353 - AluSp SINE Alu 0 313 1 356 281 119 73 chr17 20105127 20105149 -65333331 - L1MC4 LINE L1 -1124 5022 5002 633 121 0 10 chr17 20105149 20105248 -65333232 + L1PA5 LINE L1 6057 6154 0 356 281 119 73 chr17 20105248 20105492 -65332988 - L1MC4 LINE L1 -1144 5002 4730 1025 45 15 0 chr17 20106058 20106192 -65332288 + (TTTC)n Simple_repeat Simple_repeat 4 139 0 2047 124 7 0 chr17 20106194 20106477 -65332003 - AluSq SINE Alu -28 285 1 465 249 202 0 chr17 20106608 20106781 -65331699 - L2 LINE L2 0 3313 3106 613 292 43 36 chr17 20106843 20107090 -65331390 + MIR SINE MIR 3 249 -13 324 343 217 10 chr17 20108319 20108402 -65330078 + L2 LINE L2 2281 2346 -968 2388 197 100 28 chr17 20108402 20108931 -65329549 + MLT1F1 LTR MaLR 1 567 0 324 343 217 10 chr17 20108931 20109238 -65329242 + L2 LINE L2 2346 2752 -562 1286 150 68 18 chr17 20109668 20109888 -65328592 - AluJb SINE Alu -14 298 68 872 178 6 24 chr17 20109888 20109904 -65328576 - L1M3 LINE L1 -552 5616 5601 2465 150 11 56 chr17 20109904 20110372 -65328108 - L1MB1 LINE L1 -1 6167 5721 872 178 6 24 chr17 20110372 20110524 -65327956 - L1M3 LINE L1 -567 5601 5451 37 0 0 0 chr17 20111223 20111260 -65327220 + AT_rich Low_complexity Low_complexity 1 37 0 30 45 0 0 chr17 20111825 20111869 -65326611 + AT_rich Low_complexity Low_complexity 1 44 0 2482 67 0 13 chr17 20112162 20112477 -65326003 + AluY SINE Alu 1 311 0 1801 176 10 3 chr17 20112492 20112794 -65325686 - AluJo SINE Alu -8 304 1 1747 144 0 91 chr17 20113350 20113670 -65324810 + AluJb SINE Alu 1 291 -21 2949 134 126 21 chr17 20113716 20113830 -65324650 - MER1A DNA MER1_type -2174 526 425 2427 74 6 10 chr17 20113830 20114142 -65324338 - AluY SINE Alu 0 311 1 2949 134 126 21 chr17 20114142 20114503 -65323977 - MER1A DNA MER1_type -2275 425 1 1219 123 28 6 chr17 20114685 20114894 -65323586 + AluJo SINE Alu 100 312 0 866 170 0 0 chr17 20115367 20115502 -65322978 + AluJo SINE Alu 1 135 -177 2314 109 0 0 chr17 20116071 20116374 -65322106 - AluSx SINE Alu -9 303 1 321 162 0 0 chr17 20116751 20116804 -65321676 - L2 LINE L2 -1 3312 3219 2142 78 27 10 chr17 20116980 20117275 -65321205 + AluY SINE Alu 1 300 -11 1474 184 14 18 chr17 20117384 20117666 -65320814 - AluJo SINE Alu -31 281 1 2067 119 3 0 chr17 20117695 20117990 -65320490 - AluSx SINE Alu -16 296 1 335 228 90 16 chr17 20118073 20118314 -65320166 - L1MB1 LINE L1 -617 5547 5285 291 247 74 37 chr17 20118369 20118559 -65319921 - L1MB1 LINE L1 -2828 3318 3122 4258 169 97 29 chr17 20120101 20120940 -65317540 - MER21A LTR ERV1 0 931 36 209 120 40 0 chr17 20120979 20121029 -65317451 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 1352 181 37 50 chr17 20121755 20122054 -65316426 - AluJb SINE Alu -17 295 1 328 221 77 0 chr17 20122072 20122176 -65316304 - L1ME4a LINE L1 -11 6110 5999 1608 123 8 0 chr17 20122211 20122446 -65316034 - AluSx SINE Alu -75 237 1 211 212 24 24 chr17 20122616 20122701 -65315779 + (TA)n Simple_repeat Simple_repeat 1 85 0 4379 202 133 27 chr17 20122702 20122987 -65315493 - L1MB7 LINE L1 -6 6178 5925 1560 159 76 4 chr17 20122987 20123264 -65315216 - AluJb SINE Alu -15 297 1 4379 202 133 27 chr17 20123264 20123967 -65314513 - L1MB7 LINE L1 -259 5925 5298 2261 108 50 9 chr17 20123967 20124310 -65314170 - L1PA14 LINE L1 -1 6160 5804 4379 202 133 27 chr17 20124310 20125530 -65312950 - L1MB7 LINE L1 -886 5298 3729 432 300 52 14 chr17 20125570 20125780 -65312700 - L1ME4a LINE L1 -298 5823 5606 985 167 11 39 chr17 20126023 20126203 -65312277 - FAM SINE Alu 0 175 1 249 57 0 0 chr17 20126372 20126407 -65312073 + (TG)n Simple_repeat Simple_repeat 2 36 0 249 217 150 17 chr17 20126749 20126869 -65311611 - L1ME4a LINE L1 -11 6110 5975 537 266 73 52 chr17 20127142 20127390 -65311090 + MLT1K LTR MaLR 335 587 -1 211 173 39 0 chr17 20128467 20128519 -65309961 + GA-rich Low_complexity Low_complexity 2 55 0 1907 144 0 3 chr17 20129914 20130206 -65308274 - AluSx SINE Alu -21 291 1 510 322 38 6 chr17 20130253 20130436 -65308044 - MIR SINE MIR -53 209 21 1119 178 48 117 chr17 20130525 20130669 -65307811 + AluJo SINE Alu 2 115 -187 1536 208 0 3 chr17 20130669 20130963 -65307517 + AluJo SINE Alu 3 295 -17 1119 178 48 117 chr17 20130963 20131127 -65307353 + AluJo SINE Alu 115 289 -13 1813 163 0 0 chr17 20131214 20131503 -65306977 - AluSx SINE Alu -23 289 1 568 284 12 31 chr17 20131514 20131771 -65306709 - L1ME4a LINE L1 -301 5820 5569 240 280 40 20 chr17 20131893 20131993 -65306487 - L1ME4a LINE L1 -669 5452 5351 2037 129 6 0 chr17 20132457 20132768 -65305712 - AluSq SINE Alu 0 313 1 448 199 7 103 chr17 20132871 20133007 -65305473 + MIR SINE MIR 103 225 -37 521 325 44 15 chr17 20133318 20133660 -65304820 + L1ME LINE L1 5270 5621 -500 26 98 0 0 chr17 20133714 20133796 -65304684 + AT_rich Low_complexity Low_complexity 1 82 0 1591 159 43 4 chr17 20134314 20134591 -65303889 - AluJo SINE Alu -24 288 1 306 282 104 31 chr17 20134642 20134805 -65303675 - L2 LINE L2 -2 3311 3137 333 337 60 5 chr17 20136149 20136333 -65302147 + L2 LINE L2 3120 3313 0 400 298 93 28 chr17 20136406 20136654 -65301826 - L2 LINE L2 -427 2887 2624 499 183 9 43 chr17 20137238 20137353 -65301127 - MLT1B LTR MaLR 0 390 280 1428 146 24 8 chr17 20137354 20137600 -65300880 + AluJo SINE Alu 36 285 -27 1335 140 13 31 chr17 20137625 20137854 -65300626 - MLT1B LTR MaLR -164 226 2 447 19 0 0 chr17 20137959 20138011 -65300469 + (TTCG)n Simple_repeat Simple_repeat 2 53 0 224 291 114 0 chr17 20138130 20138209 -65300271 - L2 LINE L2 -1 3312 3225 2436 175 26 113 chr17 20138480 20139149 -65299331 - L1ME1 LINE L1 -263 5903 5353 2083 108 3 20 chr17 20139149 20139455 -65299025 + AluSq SINE Alu 1 301 -12 2436 175 26 113 chr17 20139455 20139780 -65298700 - L1ME1 LINE L1 -813 5353 5001 664 246 117 88 chr17 20142651 20143247 -65295233 - L2 LINE L2 -4 3309 2707 413 84 0 56 chr17 20143247 20143318 -65295162 - L1MB2 LINE L1 -4 6167 6101 664 246 117 88 chr17 20143318 20143465 -65295015 - L2 LINE L2 -606 2707 2566 1897 178 28 3 chr17 20143746 20144101 -65294379 + MLT1A1 LTR MaLR 1 364 -1 266 359 57 13 chr17 20144168 20144327 -65294153 + MIR SINE MIR 91 256 -6 1675 170 7 7 chr17 20144345 20144639 -65293841 + AluJb SINE Alu 1 294 -18 249 227 72 41 chr17 20144852 20144949 -65293531 - L2 LINE L2 -838 2476 2377 273 193 34 76 chr17 20145319 20145438 -65293042 + LTR33 LTR ERVL 377 490 -31 180 179 0 0 chr17 20145438 20145477 -65293003 - L2 LINE L2 -314 2958 2920 546 233 129 0 chr17 20146420 20146583 -65291897 - MER20 DNA MER1_type -4 215 32 393 305 115 35 chr17 20147948 20148083 -65290397 + MIR SINE MIR 12 170 -92 1672 175 126 3 chr17 20148083 20148408 -65290072 - MLT1A1 LTR MaLR 0 365 1 393 305 115 35 chr17 20148408 20148472 -65290008 + MIR SINE MIR 170 227 -35 1839 147 13 3 chr17 20148722 20149029 -65289451 - AluSx SINE Alu -2 310 1 21 0 0 0 chr17 20149676 20149697 -65288783 + AT_rich Low_complexity Low_complexity 1 21 0 1285 136 0 0 chr17 20149722 20149899 -65288581 - AluJo SINE Alu -133 179 3 279 287 0 23 chr17 20150833 20150920 -65287560 - MIR3 SINE MIR -20 188 104 225 265 38 46 chr17 20152098 20152323 -65286157 + L2 LINE L2 1887 2180 -1134 334 216 34 11 chr17 20152351 20152439 -65286041 - MER20B DNA MER1_type -54 729 640 1342 263 35 61 chr17 20152495 20153016 -65285464 - MER20B DNA MER1_type -276 507 1 1265 240 206 59 chr17 20153030 20153708 -65284772 + L2 LINE L2 2191 2968 -346 468 291 78 44 chr17 20153741 20153947 -65284533 + L2 LINE L2 3095 3307 -6 382 339 85 2 chr17 20153963 20154138 -65284342 + MIR SINE MIR 1 190 -61 1810 113 38 69 chr17 20154404 20154722 -65283758 + AluSx SINE Alu 1 308 -4 1362 132 29 0 chr17 20154866 20155070 -65283410 + MER2 DNA MER2_type 1 210 -135 6824 49 2 4 chr17 20155646 20156479 -65282001 - L1PA8 LINE L1 0 6172 5341 265 263 26 13 chr17 20156657 20156733 -65281747 - MLT1K LTR MaLR -2 586 510 302 211 0 0 chr17 20156776 20156828 -65281652 + MER5A DNA MER1_type 132 183 -6 207 255 20 0 chr17 20157668 20157719 -65280761 - MIR SINE MIR -68 140 89 991 251 46 13 chr17 20157881 20158120 -65280360 - MIR SINE MIR -14 248 2 2321 93 7 0 chr17 20159462 20159772 -65278708 + AluSx SINE Alu 1 312 0 1303 168 34 21 chr17 20160117 20160355 -65278125 - AluJo SINE Alu -30 282 42 2438 94 54 17 chr17 20161473 20161824 -65276656 + THE1B LTR MaLR 1 364 0 1918 110 53 13 chr17 20161876 20162176 -65276304 + AluSx SINE Alu 1 312 0 727 140 18 0 chr17 20162331 20162445 -65276035 + AluJo SINE Alu 2 117 -195 1535 116 17 0 chr17 20162452 20162684 -65275796 - AluSg/x SINE Alu -2 310 75 1055 113 0 0 chr17 20162685 20162827 -65275653 - AluSq/x SINE Alu -170 142 1 901 177 54 27 chr17 20162831 20163017 -65275463 + AluJo SINE Alu 106 296 -16 838 129 92 0 chr17 20163049 20163212 -65275268 + L1MB4 LINE L1 6000 6177 -3 1697 206 106 33 chr17 20163330 20163840 -65274640 - L1ME3 LINE L1 -2 6160 5614 604 232 60 7 chr17 20163974 20164125 -65274355 - L1ME3 LINE L1 -560 5602 5444 1270 160 115 52 chr17 20164850 20165138 -65273342 - AluJo SINE Alu -6 306 1 258 238 229 25 chr17 20165645 20165767 -65272713 - L2 LINE L2 0 3313 3167 2409 97 0 6 chr17 20169180 20169491 -65268989 - AluSc SINE Alu 0 309 1 2233 97 7 0 chr17 20170194 20170510 -65267970 + AluSg SINE Alu 1 310 0 332 286 43 52 chr17 20170518 20170749 -65267731 + L1MC4a LINE L1 3741 3969 -2177 2518 74 0 3 chr17 20171077 20171389 -65267091 - AluY SINE Alu 0 311 1 748 161 45 149 chr17 20171735 20171977 -65266503 + MER20 DNA MER1_type 3 219 0 329 289 190 13 chr17 20172195 20172506 -65265974 + L1MC4a LINE L1 4943 5308 -838 1242 133 41 26 chr17 20172506 20172701 -65265779 + AluJo SINE Alu 1 198 -114 543 279 164 35 chr17 20172701 20172823 -65265657 + L1MC4a LINE L1 5279 5384 -2424 1841 156 7 3 chr17 20172823 20173139 -65265341 + AluJb SINE Alu 1 317 0 543 279 164 35 chr17 20173139 20173581 -65264899 + L1MC4a LINE L1 5384 5918 -1890 2195 86 40 10 chr17 20174232 20174533 -65263947 - AluSp SINE Alu -3 310 1 815 248 140 71 chr17 20174557 20174841 -65263639 + Tigger8 DNA MER2_type 4 267 -399 1598 129 13 0 chr17 20174841 20175074 -65263406 + MER46A DNA MER2_type 1 236 0 815 248 140 71 chr17 20175074 20175108 -65263372 + Tigger8 DNA MER2_type 267 297 -369 2067 111 14 7 chr17 20175108 20175397 -65263083 + AluSx SINE Alu 2 292 -20 815 248 140 71 chr17 20175397 20175541 -65262939 + Tigger8 DNA MER2_type 297 499 -167 1545 119 165 4 chr17 20176370 20176630 -65261850 - AluJo SINE Alu 0 302 1 463 221 44 0 chr17 20176907 20177020 -65261460 - L2 LINE L2 0 3313 3196 700 298 131 13 chr17 20177091 20177464 -65261016 - L2 LINE L2 -386 2928 2512 3134 156 45 0 chr17 20177480 20178018 -65260462 - L1MB3 LINE L1 -1 6182 5621 188 289 79 0 chr17 20178584 20178660 -65259820 - MIR SINE MIR -98 164 83 595 265 30 18 chr17 20178768 20178934 -65259546 - MIR SINE MIR -5 257 90 1435 189 26 42 chr17 20179618 20179900 -65258580 - Tigger5 DNA MER2_type -1 2322 2037 2651 52 0 0 chr17 20179900 20180209 -65258271 + AluY SINE Alu 1 309 -2 1435 189 26 42 chr17 20180209 20180374 -65258106 - Tigger5 DNA MER2_type -286 2037 1 241 171 0 0 chr17 20180430 20180471 -65258009 - L1MB1 LINE L1 -28 6140 6100 1349 207 44 0 chr17 20180508 20180803 -65257677 - L1MB3 LINE L1 -153 6030 5723 216 182 0 0 chr17 20181261 20181305 -65257175 + CT-rich Low_complexity Low_complexity 3 46 0 511 188 0 0 chr17 20181390 20181475 -65257005 - U6 snRNA snRNA -1 106 22 1005 183 0 0 chr17 20182439 20182608 -65255872 - FRAM SINE Alu -7 169 1 1565 239 94 16 chr17 20182919 20183421 -65255059 - MER20B DNA MER1_type -8 775 235 225 231 19 0 chr17 20183480 20183532 -65254948 - MER115 DNA AcHobo 0 693 641 501 197 44 22 chr17 20183538 20183675 -65254805 - Zaphod DNA AcHobo -2678 1353 1214 269 174 138 56 chr17 20183696 20183892 -65254588 - Zaphod DNA AcHobo -2950 1081 870 1593 155 76 11 chr17 20183899 20184176 -65254304 - AluJo SINE Alu -17 295 1 2490 58 3 13 chr17 20184178 20184489 -65253991 - AluY SINE Alu -3 308 1 6416 215 45 71 chr17 20184491 20184727 -65253753 - L1MB3 LINE L1 -839 5307 5067 212 0 36 0 chr17 20184727 20184755 -65253725 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6416 215 45 71 chr17 20184755 20184769 -65253711 - L1MB3 LINE L1 -1079 5067 5054 2134 129 0 0 chr17 20184769 20185055 -65253425 - AluSx SINE Alu -26 286 1 6416 215 45 71 chr17 20185055 20185276 -65253204 - L1MB3 LINE L1 -1092 5054 4829 1590 164 80 14 chr17 20185276 20185551 -65252929 + AluJo SINE Alu 1 293 -19 6416 215 45 71 chr17 20185551 20186188 -65252292 - L1MB3 LINE L1 -1317 4829 4177 1902 134 51 7 chr17 20186188 20186480 -65252000 - AluSx SINE Alu -7 305 1 6416 215 45 71 chr17 20186480 20186638 -65251842 - L1MB3 LINE L1 -1969 4177 4017 2371 89 3 13 chr17 20186638 20186953 -65251527 - AluSx SINE Alu 0 312 1 6416 215 45 71 chr17 20186953 20187518 -65250962 - L1MB3 LINE L1 -2129 4017 3439 216 0 0 0 chr17 20187518 20187542 -65250938 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6416 215 45 71 chr17 20187542 20187714 -65250766 - L1MB3 LINE L1 -2707 3439 3358 2349 71 0 0 chr17 20187714 20188040 -65250440 - AluY SINE Alu 0 326 1 6416 215 45 71 chr17 20188040 20188273 -65250207 - L1MB3 LINE L1 -2788 3358 3121 1594 264 62 9 chr17 20188538 20189003 -65249477 - Zaphod DNA AcHobo -3384 647 158 596 248 12 52 chr17 20189062 20189312 -65249168 - L1MC4 LINE L1 -1342 6700 6461 852 152 0 0 chr17 20189619 20189751 -65248729 - FLAM_A SINE Alu -1 132 1 1700 156 14 14 chr17 20190468 20190750 -65247730 - AluJb SINE Alu -27 285 4 198 211 0 0 chr17 20190910 20190948 -65247532 + MIR SINE MIR 65 102 -160 2208 94 0 39 chr17 20191138 20191445 -65247035 + AluSg SINE Alu 3 297 -13 306 240 24 56 chr17 20191664 20191789 -65246691 - L1MC4 LINE L1 -1871 5937 5817 345 319 56 0 chr17 20192324 20192468 -65246012 + MIR SINE MIR 82 233 -29 2078 140 7 3 chr17 20192658 20192966 -65245514 - AluSx SINE Alu -3 309 1 1822 162 24 0 chr17 20192967 20193263 -65245217 - AluJo SINE Alu -9 303 1 3832 104 38 0 chr17 20193283 20193607 -65244873 - L1MC1 LINE L1 -67 6266 5943 452 289 26 23 chr17 20193607 20193873 -65244607 - L1PB4 LINE L1 -235 5921 5655 591 172 35 9 chr17 20194358 20194474 -65244006 - L2 LINE L2 0 3313 3195 2117 105 0 7 chr17 20194668 20194975 -65243505 - AluSg SINE Alu 0 305 1 190 292 28 28 chr17 20195804 20195876 -65242604 + L2 LINE L2 2686 2757 -557 810 253 39 9 chr17 20196535 20196764 -65241716 - L1MB7 LINE L1 0 6184 5949 2778 153 59 8 chr17 20197275 20197783 -65240697 + L1MB3 LINE L1 5599 6132 -51 1353 128 4 66 chr17 20197783 20198011 -65240469 + AluSg/x SINE Alu 74 288 -22 306 151 0 0 chr17 20198011 20198064 -65240416 + L1MB3 LINE L1 6130 6182 -1 1353 128 4 66 chr17 20198064 20198077 -65240403 + AluSg/x SINE Alu 288 300 -10 1429 146 0 5 chr17 20198190 20198403 -65240077 + AluJb SINE Alu 87 298 -14 2072 99 57 3 chr17 20198405 20198688 -65239792 + AluSx SINE Alu 3 300 -12 2160 123 0 19 chr17 20199174 20199492 -65238988 - AluJo SINE Alu 0 312 1 661 250 0 0 chr17 20199642 20199770 -65238710 - FLAM_A SINE Alu -5 128 1 272 320 29 20 chr17 20200142 20200297 -65238183 + MIR SINE MIR 3 155 -78 848 263 131 42 chr17 20200386 20200843 -65237637 - MLT1L LTR MaLR -117 498 1 5178 130 50 24 chr17 20200895 20201627 -65236853 - L1MC2 LINE L1 -2 6342 5581 2213 99 7 3 chr17 20201627 20201930 -65236550 + AluSq SINE Alu 2 305 0 5178 130 50 24 chr17 20201930 20202074 -65236406 - L1MC2 LINE L1 -763 5581 5442 1215 115 71 0 chr17 20202083 20202266 -65236214 - AluSp SINE Alu -11 302 107 2245 94 0 7 chr17 20202557 20202855 -65235625 - AluSq SINE Alu -17 296 1 341 234 9 19 chr17 20202917 20203024 -65235456 - L1MB7 LINE L1 -1994 5814 5709 199 256 0 0 chr17 20203041 20203084 -65235396 + MIR SINE MIR 13 55 -207 1662 174 48 1 chr17 20203086 20203579 -65234901 + MER68 LTR ERV1 3 552 -10 430 272 147 0 chr17 20203582 20203766 -65234714 + MIR SINE MIR 51 261 -1 2381 67 0 35 chr17 20203801 20204116 -65234364 - AluY SINE Alu -7 304 1 479 170 0 116 chr17 20204143 20204218 -65234262 - AluSp SINE Alu -78 235 176 2235 64 11 0 chr17 20204218 20204485 -65233995 + AluSp SINE Alu 28 297 -16 479 170 0 116 chr17 20204485 20204521 -65233959 - AluSp SINE Alu -137 176 137 1289 204 97 7 chr17 20204984 20205263 -65233217 + Tigger5 DNA MER2_type 1 304 -2019 436 153 28 0 chr17 20205260 20205332 -65233148 + Tigger5 DNA MER2_type 2250 2323 0 * 1776 79 0 0 chr17 20205600 20205814 -65232666 + AluSq SINE Alu 1 214 -99 1990 132 11 0 chr17 20205852 20206155 -65232325 + AluSx SINE Alu 1 306 0 1376 219 24 57 chr17 20206273 20206482 -65231998 - MLT1A2 LTR MaLR -4 370 178 2129 87 18 0 chr17 20206482 20206790 -65231690 - AluSc SINE Alu 0 309 9 1376 219 24 57 chr17 20206790 20206963 -65231517 - MLT1A2 LTR MaLR -196 178 1 189 337 134 47 chr17 20207035 20207483 -65230997 - L2 LINE L2 -369 2945 2459 2339 251 147 19 chr17 20208006 20209158 -65229322 - L2 LINE L2 -92 3221 1924 218 186 0 0 chr17 20210909 20210952 -65227528 - MIR SINE MIR -75 133 91 642 221 0 0 chr17 20211672 20211794 -65226686 - FLAM_A SINE Alu -11 122 1 521 300 45 50 chr17 20212245 20212585 -65225895 - LTR16B LTR ERVL -83 367 54 1501 160 51 74 chr17 20212585 20212779 -65225701 - AluJb SINE Alu -5 307 121 2014 135 44 0 chr17 20212779 20213075 -65225405 - AluSx SINE Alu -2 310 2 1501 160 51 74 chr17 20213075 20213192 -65225288 - AluJb SINE Alu -191 121 3 521 300 45 50 chr17 20213192 20213237 -65225243 - LTR16B LTR ERVL -396 54 10 230 348 0 0 chr17 20213676 20213745 -65224735 + MER91A DNA MER1_type 1 69 -127 872 249 120 9 chr17 20213966 20214300 -65224180 - MLT1J1 LTR MaLR 0 446 76 282 216 27 63 chr17 20214560 20214671 -65223809 - HAL1 LINE L1 -152 2355 2249 1696 93 9 0 chr17 20214837 20215053 -65223427 + AluSg/x SINE Alu 78 295 -17 2350 106 0 0 chr17 20215615 20215926 -65222554 - AluSx SINE Alu -1 311 1 2294 97 0 3 chr17 20215967 20216277 -65222203 - AluY SINE Alu -2 309 1 449 287 64 0 chr17 20216279 20216436 -65222044 + MIR SINE MIR 94 260 -2 2314 97 3 3 chr17 20216577 20216876 -65221604 + AluSp SINE Alu 1 299 -14 21 36 0 0 chr17 20217311 20217339 -65221141 + AT_rich Low_complexity Low_complexity 1 28 0 1891 151 0 7 chr17 20217396 20217694 -65220786 - AluJo SINE Alu -16 296 1 1359 139 90 45 chr17 20218001 20218289 -65220191 - AluJo SINE Alu -11 301 1 40 21 0 0 chr17 20218832 20218879 -65219601 + AT_rich Low_complexity Low_complexity 1 47 0 6529 92 25 0 chr17 20218885 20219825 -65218655 - L1PA10 LINE L1 -12 6156 5202 308 301 96 6 chr17 20219961 20220117 -65218363 + L1M4 LINE L1 2381 2550 -3596 955 151 70 38 chr17 20220666 20220852 -65217628 + AluJo SINE Alu 1 192 -120 320 117 67 17 chr17 20220945 20221065 -65217415 + (TA)n Simple_repeat Simple_repeat 1 126 0 2168 111 7 3 chr17 20221228 20221526 -65216954 + AluSp SINE Alu 1 299 -14 293 194 31 101 chr17 20221768 20221897 -65216583 - MER113 DNA MER1_type? -400 121 2 299 308 108 32 chr17 20221972 20222381 -65216099 + L1M4 LINE L1 3656 4095 -2051 223 305 11 11 chr17 20222572 20222667 -65215813 + (TATATG)n Simple_repeat Simple_repeat 5 99 0 2001 146 0 0 chr17 20222705 20222993 -65215487 - AluJb SINE Alu -13 299 12 192 333 9 29 chr17 20223395 20223500 -65214980 + MIR3 SINE MIR 105 207 -1 762 181 0 0 chr17 20223507 20223634 -65214846 - FLAM_C SINE Alu -6 127 1 1351 160 0 9 chr17 20225388 20225601 -65212879 - AluJo SINE Alu -21 291 81 221 250 31 52 chr17 20226000 20226096 -65212384 + L2 LINE L2 2885 2978 -335 258 279 70 31 chr17 20226117 20226246 -65212234 - MER94 DNA DNA 0 134 1 221 186 23 0 chr17 20226255 20226298 -65212182 + L2 LINE L2 3008 3051 -262 1986 140 13 0 chr17 20227760 20228060 -65210420 - AluSq SINE Alu -9 304 1 34 0 0 0 chr17 20228137 20228171 -65210309 + AT_rich Low_complexity Low_complexity 1 34 0 457 264 77 5 chr17 20228219 20228427 -65210053 - LTR16A LTR ERVL -14 436 214 247 134 60 75 chr17 20229252 20229319 -65209161 - L1MEd LINE L1 -4973 1146 1081 255 290 114 8 chr17 20229900 20230031 -65208449 + MIR SINE MIR 32 176 -86 2194 178 101 13 chr17 20230306 20230762 -65207718 - MLT1D LTR MaLR 0 505 10 380 355 73 17 chr17 20230849 20231083 -65207397 - L2 LINE L2 -182 3090 2844 644 262 151 0 chr17 20231194 20231518 -65206962 - L1ME4a LINE L1 -1 6120 5748 2344 91 0 3 chr17 20231533 20231840 -65206640 - AluSg SINE Alu -4 306 1 1047 149 0 23 chr17 20231843 20232017 -65206463 - AluJb SINE Alu -7 305 136 230 296 90 37 chr17 20232502 20232691 -65205789 + HAL1 LINE L1 1155 1353 -1154 900 295 58 66 chr17 20232887 20233402 -65205078 - LTR67 LTR ERVL -2 555 45 254 233 8 142 chr17 20234389 20234509 -65203971 - MER102b DNA MER1_type -6 335 232 303 244 24 49 chr17 20234515 20234597 -65203883 - MER102b DNA MER1_type -261 80 1 327 280 125 16 chr17 20234897 20235208 -65203272 + L1ME4a LINE L1 2880 3224 -2922 1672 203 0 9 chr17 20235932 20236247 -65202233 - AluJb SINE Alu 0 312 1 529 207 147 7 chr17 20236662 20236812 -65201668 - MLT1J LTR MaLR -336 175 5 387 285 112 39 chr17 20236943 20237332 -65201148 + L1ME4a LINE L1 5365 5790 -331 1871 172 20 35 chr17 20237332 20237680 -65200800 + MER2 DNA MER2_type 1 343 -1 387 285 112 39 chr17 20237680 20237719 -65200761 + L1ME4a LINE L1 5790 5825 -296 2162 105 0 35 chr17 20237722 20238035 -65200445 + AluSx SINE Alu 3 304 -8 663 247 132 11 chr17 20238343 20238533 -65199947 + MIR SINE MIR 8 220 -42 23 54 0 0 chr17 20238573 20238610 -65199870 + AT_rich Low_complexity Low_complexity 1 37 0 691 265 137 13 chr17 20238995 20239326 -65199154 + MLT1G LTR MaLR 5 354 -241 364 270 45 0 chr17 20239366 20239477 -65199003 + MLT1G LTR MaLR 428 543 -12 2319 109 0 0 chr17 20239658 20239969 -65198511 - AluSx SINE Alu -1 311 1 1142 144 104 15 chr17 20240008 20240209 -65198271 - Tigger1 DNA MER2_type 0 2418 2200 842 169 22 0 chr17 20240205 20240341 -65198139 - Tigger1 DNA MER2_type -2279 139 1 * 1638 170 0 37 chr17 20240411 20240705 -65197775 - AluJb SINE Alu -29 283 1 1236 132 96 23 chr17 20240817 20241037 -65197443 - MER46A DNA MER2_type 0 236 1 562 284 118 30 chr17 20241174 20241547 -65196933 + MLT1K LTR MaLR 177 582 -6 1119 273 71 47 chr17 20241556 20242062 -65196418 + L3 LINE CR1 1059 1576 -1 2225 88 3 59 chr17 20242088 20242408 -65196072 - AluSx SINE Alu -10 302 1 327 199 96 83 chr17 20242431 20242587 -65195893 + MIR SINE MIR 84 241 -21 258 224 37 127 chr17 20244154 20244288 -65194192 - HAL1 LINE L1 -8 2499 2378 1078 176 126 21 chr17 20244313 20244551 -65193929 - L1MC1 LINE L1 -5 6328 6066 560 131 12 0 chr17 20244553 20244637 -65193843 - FLAM SINE Alu -18 125 41 3392 126 54 118 chr17 20244689 20245328 -65193152 - L1MC1 LINE L1 -317 6016 5338 2109 90 12 50 chr17 20245328 20245649 -65192831 - L1PA7 LINE L1 0 6154 5846 3392 126 54 118 chr17 20245649 20245772 -65192708 - L1MC1 LINE L1 -995 5338 5313 1659 156 3 117 chr17 20245772 20246106 -65192374 - AluJb SINE Alu -6 296 1 3392 126 54 118 chr17 20246106 20246232 -65192248 - L1MC1 LINE L1 -1020 5313 5181 4577 73 15 0 chr17 20246702 20247248 -65191232 - MER41A LTR ERV1 0 554 1 12613 100 32 10 chr17 20247248 20248334 -65190146 - MER41A-int LTR ERV1 -2 5944 4883 2306 90 7 3 chr17 20248334 20248635 -65189845 - AluSc SINE Alu -7 302 1 12613 100 32 10 chr17 20248635 20249388 -65189092 - MER41A-int LTR ERV1 -1063 4883 2434 1419 126 0 5 chr17 20249392 20249591 -65188889 - AluSg/x SINE Alu -15 297 100 5263 135 63 55 chr17 20249591 20251000 -65187480 - MER57-int LTR ERV1 -2942 4874 3355 317 96 58 0 chr17 20250996 20251048 -65187432 - MER57-int LTR ERV1 -3725 2221 2167 * 855 91 144 9 chr17 20251024 20251179 -65187301 - MER57-int LTR ERV1 -3929 2017 1505 * 4478 150 91 15 chr17 20251166 20251972 -65186508 - MER57-int LTR ERV1 -4171 1775 909 3506 128 26 1 chr17 20251939 20252534 -65185946 - MER57-int LTR ERV1 -5263 683 226 * 1009 240 156 6 chr17 20252550 20252871 -65185609 - HAL1 LINE L1 -612 1895 1527 * 1479 143 56 28 chr17 20252856 20252912 -65185568 - L1M2 LINE L1 -628 5663 5610 2263 120 0 0 chr17 20252912 20253212 -65185268 - AluSx SINE Alu -6 306 7 1587 137 0 36 chr17 20253215 20253493 -65184987 - AluJo SINE Alu -1 311 44 1479 143 56 28 chr17 20253493 20253623 -65184857 - L1M2 LINE L1 -682 5609 5460 1925 88 0 15 chr17 20253623 20253885 -65184595 - AluSc SINE Alu -14 295 38 1479 143 56 28 chr17 20253885 20253980 -65184500 - L1M2 LINE L1 -831 5460 5369 2038 104 6 67 chr17 20255010 20255338 -65183142 + AluSq SINE Alu 1 308 -5 4029 161 59 16 chr17 20255630 20256374 -65182106 + Tigger2 DNA MER2_type 3 778 -1940 1665 136 24 0 chr17 20256405 20256656 -65181824 + Tigger2 DNA MER2_type 2461 2717 -1 184 245 57 19 chr17 20257192 20257245 -65181235 - MER5B DNA MER1_type -55 123 69 440 339 38 11 chr17 20257577 20257760 -65180720 - MLT1L LTR MaLR -2 613 426 322 284 27 47 chr17 20257851 20257999 -65180481 - MLT1L LTR MaLR -357 258 114 278 241 9 102 chr17 20260041 20260149 -65178331 - L2 LINE L2 -188 3084 2987 230 162 0 0 chr17 20260149 20260186 -65178294 - MLT1L LTR MaLR -3 612 576 753 278 130 44 chr17 20260188 20260710 -65177770 - L1ME4a LINE L1 -83 6038 5472 489 231 96 13 chr17 20261425 20261581 -65176899 - L1ME4a LINE L1 -1 6120 5952 333 275 140 31 chr17 20261668 20261861 -65176619 - L1ME4a LINE L1 -2932 3214 3001 280 314 44 15 chr17 20262476 20262613 -65175867 - L1M4 LINE L1 -2023 4123 3983 970 159 13 6 chr17 20262641 20262798 -65175682 - FRAM SINE Alu -20 156 1 369 189 11 33 chr17 20264398 20264488 -65173992 - MLT1L LTR MaLR -501 114 27 2025 125 107 24 chr17 20266167 20266503 -65171977 - THE1B LTR MaLR 0 364 1 183 283 0 50 chr17 20266566 20266626 -65171854 + L2 LINE L2 3216 3272 0 29 60 0 0 chr17 20266664 20266714 -65171766 + AT_rich Low_complexity Low_complexity 1 50 0 1653 158 40 30 chr17 20266921 20267224 -65171256 - AluJo SINE Alu -4 308 3 1087 199 92 8 chr17 20267714 20267965 -65170515 - L1MB7 LINE L1 0 6184 5913 793 189 5 32 chr17 20268016 20268201 -65170279 - L1MB7 LINE L1 -864 5282 5103 2143 112 7 7 chr17 20268335 20268639 -65169841 - AluSx SINE Alu -8 304 1 493 171 28 185 chr17 20270119 20270330 -65168150 - LTR34 LTR ERV1 -521 178 1 705 122 75 0 chr17 20270731 20270838 -65167642 + FLAM_A SINE Alu 21 135 -7 1290 185 66 28 chr17 20271599 20271886 -65166594 + AluJo SINE Alu 1 298 -14 332 251 217 49 chr17 20272039 20272242 -65166238 - MIR SINE MIR -11 251 15 262 331 68 8 chr17 20272256 20272389 -65166091 + MER112 DNA MER1_type 2 142 -118 210 258 45 0 chr17 20272406 20272472 -65166008 + CT-rich Low_complexity Low_complexity 5 73 0 13770 155 28 25 chr17 20272474 20275883 -65162597 - L1MA3 LINE L1 0 7724 4177 2152 109 3 3 chr17 20275883 20276176 -65162304 + AluSx SINE Alu 1 293 -19 13770 155 28 25 chr17 20276176 20276375 -65162105 - L1MA3 LINE L1 -3547 4177 3980 * 17569 152 75 11 chr17 20276354 20277225 -65161255 - L1MA3 LINE L1 -4322 3243 2429 2429 71 3 0 chr17 20277225 20277519 -65160961 + AluSg SINE Alu 1 295 -15 17569 152 75 11 chr17 20277519 20279682 -65158798 - L1MA3 LINE L1 -5136 2429 16 526 272 26 0 chr17 20279757 20279871 -65158609 - L2 LINE L2 0 3313 3197 419 141 0 0 chr17 20281101 20281172 -65157308 - L1PA16 LINE L1 -16 6150 6080 2013 69 4 4 chr17 20281465 20281712 -65156768 + AluSq SINE Alu 2 248 -65 805 182 54 0 chr17 20282026 20282174 -65156306 - FRAM SINE Alu -11 165 10 1770 251 61 5 chr17 20282777 20283204 -65155276 - MER82 DNA MER2_type 0 653 203 1757 163 0 43 chr17 20283213 20283538 -65154942 + AluJb SINE Alu 1 311 -1 592 252 52 0 chr17 20283984 20284119 -65154361 - MER82 DNA MER2_type -510 143 2 219 293 20 30 chr17 20284713 20284812 -65153668 + MER5B DNA MER1_type 64 161 -17 337 329 0 46 chr17 20284983 20285135 -65153345 - MER5B DNA MER1_type -30 148 4 714 183 16 8 chr17 20287365 20287491 -65150989 - FLAM_A SINE Alu -4 138 12 21 0 0 0 chr17 20290487 20290508 -65147972 + AT_rich Low_complexity Low_complexity 1 21 0 2413 92 7 0 chr17 20291104 20291442 -65147038 - AluSq SINE Alu 0 313 3 1911 145 3 0 chr17 20291591 20291873 -65146607 - AluSq SINE Alu -30 283 1 465 326 100 27 chr17 20293246 20293713 -65144767 - L1ME4a LINE L1 -215 5906 5389 1922 140 0 69 chr17 20293713 20294048 -65144432 - AluJb SINE Alu 0 312 1 465 326 100 27 chr17 20294048 20294191 -65144289 - L1ME4a LINE L1 -732 5389 5258 23 33 0 0 chr17 20294642 20294672 -65143808 + AT_rich Low_complexity Low_complexity 1 30 0 181 267 17 17 chr17 20295672 20295732 -65142748 - L2 LINE L2 -332 2981 2922 328 281 274 0 chr17 20296544 20296697 -65141783 + MIR SINE MIR 38 232 -30 223 154 0 0 chr17 20297380 20297419 -65141061 + (CA)n Simple_repeat Simple_repeat 1 39 0 1916 130 0 39 chr17 20297766 20298073 -65140407 + AluSx SINE Alu 1 295 -17 30 0 0 0 chr17 20298228 20298258 -65140222 + AT_rich Low_complexity Low_complexity 1 30 0 232 298 0 24 chr17 20301161 20301245 -65137235 - L1ME4a LINE L1 -104 6017 5936 409 244 15 89 chr17 20301315 20301450 -65137030 + L2 LINE L2 3189 3313 0 238 194 194 65 chr17 20301647 20301817 -65136663 - LTR67 LTR ERVL -8 549 358 300 265 173 49 chr17 20302395 20302580 -65135900 - L1ME4a LINE L1 -2336 5472 5265 2070 129 0 0 chr17 20302969 20303273 -65135207 + AluSg SINE Alu 1 304 0 832 263 90 73 chr17 20303274 20304162 -65134318 + L1MC/D LINE L1 817 1683 -4532 1243 268 83 39 chr17 20304164 20304776 -65133704 + L1MC/D LINE L1 3267 3965 -2250 1956 145 14 7 chr17 20304776 20305073 -65133407 + AluSx SINE Alu 1 299 -13 1243 268 83 39 chr17 20305073 20305305 -65133175 + L1MC/D LINE L1 3965 4185 -2030 313 239 130 0 chr17 20305465 20305557 -65132923 + L1MC/D LINE L1 5747 5850 -2027 706 232 49 22 chr17 20305562 20305747 -65132733 - MIR SINE MIR -3 259 70 4363 166 23 24 chr17 20306003 20306093 -65132387 - L1MB1 LINE L1 -13 6155 6066 1268 104 74 15 chr17 20306093 20306295 -65132185 - L1PA16 LINE L1 0 6166 5953 4363 166 23 24 chr17 20306295 20306994 -65131486 - L1MB1 LINE L1 -102 6066 5367 899 144 0 0 chr17 20307665 20307797 -65130683 - FLAM_C SINE Alu 0 133 2 378 0 0 0 chr17 20307966 20308008 -65130472 + (TG)n Simple_repeat Simple_repeat 2 43 0 523 298 84 0 chr17 20308153 20308331 -65130149 + MIR SINE MIR 49 241 -21 264 280 91 38 chr17 20308768 20308900 -65129580 - MIR3 SINE MIR -33 175 37 380 103 0 0 chr17 20309261 20309319 -65129161 - L1MB2 LINE L1 -7 6164 6107 1632 174 10 24 chr17 20309409 20309703 -65128777 - AluJo SINE Alu -22 290 1 2490 68 0 0 chr17 20309712 20310008 -65128472 - AluY SINE Alu -15 296 1 275 256 149 14 chr17 20310409 20310550 -65127930 + MIR3 SINE MIR 43 205 -3 644 211 23 23 chr17 20310563 20310696 -65127784 + FLAM_A SINE Alu 1 133 0 501 235 195 0 chr17 20310970 20311119 -65127361 + MER45A DNA AcHobo 1 178 0 1709 185 3 19 chr17 20313334 20313642 -65124838 - AluJo SINE Alu -9 303 1 418 315 54 7 chr17 20314256 20314405 -65124075 + MER91A DNA MER1_type 1 156 -40 3435 137 37 54 chr17 20314415 20315044 -65123436 - LTR35 LTR ERV1 0 618 1 2582 44 0 0 chr17 20315061 20315354 -65123126 + AluY SINE Alu 10 302 -9 2204 255 45 58 chr17 20315604 20316404 -65122076 - L1ME3A LINE L1 -2 6168 5379 464 232 0 0 chr17 20316720 20316819 -65121661 + FRAM SINE Alu 26 124 -52 1874 50 0 0 chr17 20317136 20317355 -65121125 + L1PA5 LINE L1 5928 6146 -8 198 0 0 0 chr17 20317717 20317739 -65120741 + (TG)n Simple_repeat Simple_repeat 1 22 0 1131 166 15 0 chr17 20318066 20318265 -65120215 - L1PA16 LINE L1 -3 6163 5962 2192 96 0 0 chr17 20318291 20318582 -65119898 - AluSx SINE Alu 0 312 22 4144 167 44 8 chr17 20318650 20320084 -65118396 - L1PA16 LINE L1 -204 5962 4479 2268 59 0 3 chr17 20320133 20320421 -65118059 + AluY SINE Alu 1 287 -24 609 259 97 22 chr17 20320431 20320659 -65117821 - L2 LINE L2 -50 3263 3019 538 206 227 16 chr17 20321337 20321531 -65116949 + MLT1E2 LTR MaLR 137 371 -255 1388 170 112 4 chr17 20322988 20323265 -65115215 + MER68 LTR ERV1 1 307 -255 1096 92 13 2 chr17 20323265 20323504 -65114976 - AluSp SINE Alu -21 292 2 1162 184 29 21 chr17 20323505 20323744 -65114736 + MER68 LTR ERV1 297 537 -25 1793 186 8 32 chr17 20323748 20324124 -65114356 + L1MB5 LINE L1 5802 6168 -6 1368 176 3 88 chr17 20324149 20324468 -65114012 + AluJo SINE Alu 4 295 -17 320 288 102 33 chr17 20324541 20324902 -65113578 - L1ME LINE L1 -461 5660 5270 1024 261 144 35 chr17 20324916 20325521 -65112959 - HAL1 LINE L1 0 2507 1837 2240 233 139 59 chr17 20325535 20326203 -65112277 - HAL1 LINE L1 -714 1793 1180 2336 151 8 8 chr17 20326203 20326601 -65111879 - L1MB2 LINE L1 -1 6170 5773 2240 233 139 59 chr17 20326601 20327033 -65111447 - HAL1 LINE L1 -1327 1180 587 1751 125 68 0 chr17 20327033 20327312 -65111168 + AluSx SINE Alu 1 298 -14 2240 233 139 59 chr17 20327312 20327404 -65111076 - HAL1 LINE L1 -1920 587 504 1280 253 24 24 chr17 20327428 20327807 -65110673 - HAL1 LINE L1 -2114 393 15 355 314 82 44 chr17 20328282 20328327 -65110153 - L1ME LINE L1 -1908 4238 4196 1719 130 92 3 chr17 20328327 20328611 -65109869 - AluSc SINE Alu 0 309 1 355 314 82 44 chr17 20328611 20328724 -65109756 - L1ME LINE L1 -1950 4196 4074 41 0 0 0 chr17 20328746 20328787 -65109693 + AT_rich Low_complexity Low_complexity 1 41 0 466 355 22 33 chr17 20328787 20329060 -65109420 - L1ME LINE L1 -2100 4046 3777 1483 182 3 38 chr17 20329935 20330253 -65108227 - AluJo SINE Alu -5 307 1 1492 203 37 23 chr17 20331385 20331734 -65106746 - L1MB3 LINE L1 0 6183 5830 821 228 0 0 chr17 20332386 20332531 -65105949 + FRAM SINE Alu 1 142 -34 189 0 0 0 chr17 20332531 20332552 -65105928 + (TC)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr17 20332649 20332670 -65105810 + AT_rich Low_complexity Low_complexity 1 21 0 2402 80 3 0 chr17 20333141 20333453 -65105027 - AluSp SINE Alu 0 313 1 302 294 12 0 chr17 20333724 20333809 -65104671 + L1MB3 LINE L1 5830 5915 -268 226 222 19 0 chr17 20333844 20333898 -65104582 + L1MC/D LINE L1 5541 5595 -526 292 243 0 0 chr17 20333909 20333987 -65104493 + L1MC/D LINE L1 5670 5747 -374 589 311 119 4 chr17 20334057 20334292 -65104188 - MIR SINE MIR 0 262 1 986 186 72 0 chr17 20334404 20334598 -65103882 + MER3 DNA MER1_type 1 208 -1 356 220 22 44 chr17 20334734 20334825 -65103655 - MIR3 SINE MIR -48 160 72 607 207 44 58 chr17 20334930 20335118 -65103362 + MER6 DNA MER2_type -52 864 -1 378 261 7 29 chr17 20336292 20336430 -65102050 + L1M4 LINE L1 4565 4699 -1447 1779 150 0 29 chr17 20336724 20337037 -65101443 + AluJo SINE Alu 1 304 -8 358 224 140 14 chr17 20337268 20337411 -65101069 - L1MB3 LINE L1 -2331 5477 5317 1642 192 0 7 chr17 20337418 20337720 -65100760 - AluJb SINE Alu -12 300 1 310 291 22 93 chr17 20337781 20337963 -65100517 - L1MB3 LINE L1 -985 5161 4993 338 357 54 9 chr17 20337971 20338195 -65100285 + L1MEc LINE L1 149 382 -6014 250 138 35 17 chr17 20339574 20339632 -65098848 + CT-rich Low_complexity Low_complexity 4 62 0 1623 175 30 3 chr17 20339635 20339932 -65098548 - AluJo SINE Alu -1 311 7 2774 16 0 0 chr17 20340967 20341285 -65097195 + AluYb8 SINE Alu 1 318 0 3764 88 46 12 chr17 20341622 20342189 -65096291 - L1PA11 LINE L1 -1 6173 5588 1876 94 0 109 chr17 20342189 20342472 -65096008 + L1PA11 LINE L1 5268 5580 -585 2674 71 3 38 chr17 20342472 20342600 -65095880 - THE1A LTR MaLR 0 355 224 2274 83 0 19 chr17 20342600 20342914 -65095566 - AluSg SINE Alu -2 308 1 2674 71 3 38 chr17 20342914 20343152 -65095328 - THE1A LTR MaLR -131 224 2 1861 123 0 14 chr17 20343152 20343437 -65095043 - AluSx SINE Alu -31 281 1 1876 94 0 109 chr17 20343437 20343502 -65094978 + L1P4 LINE L1 5578 5579 -586 352 259 0 0 chr17 20344088 20344173 -65094307 + U6 snRNA snRNA 1 85 -22 769 214 65 0 chr17 20344176 20344330 -65094150 - AluJo/FRAM SINE Alu -15 297 134 1666 149 0 24 chr17 20344330 20344619 -65093861 - AluSx SINE Alu -1 311 30 264 304 252 0 chr17 20345246 20345361 -65093119 + MIR SINE MIR 107 250 -12 1768 158 10 0 chr17 20345384 20345675 -65092805 - AluSx SINE Alu -18 294 1 1561 129 8 23 chr17 20346156 20346419 -65092061 - AluSx SINE Alu -11 301 43 1987 128 30 0 chr17 20347816 20348113 -65090367 - AluSq SINE Alu -7 306 1 377 250 0 18 chr17 20348394 20348562 -65089918 + (ATGGTG)n Simple_repeat Simple_repeat 5 169 0 270 256 0 56 chr17 20348565 20348655 -65089825 + MER103 DNA DNA 4 88 -78 216 0 0 0 chr17 20348846 20348870 -65089610 + (TTA)n Simple_repeat Simple_repeat 3 26 0 8641 53 4 1 chr17 20348870 20350704 -65087776 - L1PA5 LINE L1 -18 6136 4299 396 258 61 8 chr17 20351187 20351319 -65087161 - MER103 DNA DNA 0 166 28 844 214 92 5 chr17 20351377 20351583 -65086897 - MER58A DNA MER1_type 0 224 1 1975 99 75 0 chr17 20351901 20352183 -65086297 + AluSx SINE Alu 1 303 -9 450 296 112 0 chr17 20352441 20352610 -65085870 - L2 LINE L2 -733 2581 2394 2018 186 32 22 chr17 20352723 20352753 -65085727 - MLT2D LTR ERVL -7 407 379 252 0 0 0 chr17 20352753 20352781 -65085699 + (GA)n Simple_repeat Simple_repeat 2 29 0 231 36 0 0 chr17 20352780 20352808 -65085672 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 2018 186 32 22 chr17 20352781 20352808 -65085672 - MLT2D LTR ERVL -35 379 354 180 0 0 0 chr17 20352808 20352828 -65085652 + (GA)n Simple_repeat Simple_repeat 2 21 0 2018 186 32 22 chr17 20352828 20353103 -65085377 - MLT2D LTR ERVL -60 354 94 1700 157 26 32 chr17 20353103 20353416 -65085064 + AluJo SINE Alu 1 311 -1 2018 186 32 22 chr17 20353416 20353511 -65084969 - MLT2D LTR ERVL -320 94 1 511 250 54 81 chr17 20353593 20353746 -65084734 - L2 LINE L2 -941 2373 2217 751 197 104 6 chr17 20353746 20353929 -65084551 + MER3 DNA MER1_type 5 205 -4 511 250 54 81 chr17 20353929 20354107 -65084373 - L2 LINE L2 -1097 2217 2051 22 0 0 0 chr17 20355240 20355262 -65083218 + AT_rich Low_complexity Low_complexity 1 22 0 1910 153 0 3 chr17 20355531 20355838 -65082642 - AluSx SINE Alu -6 306 1 406 162 0 15 chr17 20356465 20356533 -65081947 - FLAM_A SINE Alu -65 67 1 566 179 89 8 chr17 20356606 20356729 -65081751 + FLAM_A SINE Alu 1 133 0 281 256 12 24 chr17 20356905 20356987 -65081493 + L1ME LINE L1 5524 5604 -517 1936 134 0 0 chr17 20357502 20357794 -65080686 + AluSx SINE Alu 1 292 -20 1609 170 0 58 chr17 20357821 20358133 -65080347 + AluSx SINE Alu 1 294 -18 23 54 0 0 chr17 20358182 20358219 -65080261 + AT_rich Low_complexity Low_complexity 1 37 0 508 311 60 0 chr17 20358335 20358502 -65079978 + HAL1 LINE L1 1517 1693 -814 325 258 133 13 chr17 20359296 20359521 -65078959 + HAL1 LINE L1 2248 2499 -8 398 282 47 41 chr17 20360125 20360295 -65078185 + L1ME LINE L1 6 176 -5943 334 268 102 44 chr17 20360660 20361022 -65077458 + L1ME LINE L1 700 1082 -5037 498 261 116 78 chr17 20361023 20361407 -65077073 - MLT1L LTR MaLR -6 609 108 418 215 62 84 chr17 20361503 20361768 -65076712 + L1ME LINE L1 1076 1372 -4903 347 269 45 0 chr17 20361780 20361936 -65076544 + L1ME LINE L1 5272 5434 -713 2291 92 0 3 chr17 20361937 20362243 -65076237 + AluSq SINE Alu 1 305 -8 4485 113 20 47 chr17 20363221 20363642 -65074838 - L1PA16 LINE L1 0 6166 5772 2178 106 3 13 chr17 20363642 20363953 -65074527 - AluSq SINE Alu -5 308 1 4485 113 20 47 chr17 20363953 20364274 -65074206 - L1PA16 LINE L1 -394 5772 5444 239 352 267 0 chr17 20364700 20364876 -65073604 - MIR SINE MIR -26 236 14 3081 211 90 39 chr17 20364898 20365209 -65073271 - L1M4 LINE L1 -1704 4442 4148 1978 113 0 10 chr17 20365209 20365502 -65072978 - AluSx SINE Alu 0 312 23 3081 211 90 39 chr17 20365502 20366105 -65072375 - L1M4 LINE L1 -1998 4148 3482 998 167 0 0 chr17 20368322 20368478 -65070002 + FRAM SINE Alu 1 153 -23 234 296 81 52 chr17 20369648 20369820 -65068660 + MER5B DNA MER1_type 2 178 0 2077 129 0 10 chr17 20370190 20370501 -65067979 - AluSq SINE Alu -5 308 1 533 100 0 11 chr17 20370516 20370606 -65067874 - Alu SINE Alu 0 311 223 1752 170 0 41 chr17 20370964 20371091 -65067389 + AluJo SINE Alu 1 132 -180 2025 134 23 10 chr17 20371091 20371390 -65067090 - AluSx SINE Alu -9 303 1 1752 170 0 41 chr17 20371390 20371579 -65066901 + AluJo SINE Alu 132 304 -8 21 71 0 0 chr17 20372823 20372865 -65065615 + AT_rich Low_complexity Low_complexity 1 42 0 2378 93 0 10 chr17 20373229 20373541 -65064939 - AluSc SINE Alu 0 309 1 1366 141 16 21 chr17 20373556 20373798 -65064682 + LOR1b LTR ERV1 221 461 0 335 115 33 0 chr17 20373880 20373941 -65064539 + CT-rich Low_complexity Low_complexity 4 66 0 2375 88 0 0 chr17 20373944 20374240 -65064240 - AluSx SINE Alu -16 296 1 340 323 73 106 chr17 20374337 20375105 -65063375 - L1M2 LINE L1 -5450 1399 657 2384 31 42 0 chr17 20375749 20376037 -65062443 + AluY SINE Alu 1 300 -11 885 64 0 0 chr17 20376115 20376225 -65062255 + AluSg SINE Alu 1 110 -200 2249 82 0 10 chr17 20376527 20376831 -65061649 + AluY SINE Alu 1 301 -10 553 136 0 64 chr17 20376831 20376941 -65061539 + U6 snRNA snRNA 4 106 -1 227 325 83 38 chr17 20377603 20377760 -65060720 - MIR SINE MIR -41 221 58 2393 61 7 3 chr17 20378351 20378646 -65059834 - AluY SINE Alu -15 296 1 21 0 0 0 chr17 20378735 20378756 -65059724 + AT_rich Low_complexity Low_complexity 1 21 0 2199 167 21 28 chr17 20378786 20379222 -65059258 - Tigger2a DNA MER2_type 0 434 2 1680 169 34 10 chr17 20379327 20379623 -65058857 + AluJo SINE Alu 1 303 -9 1841 154 3 39 chr17 20380340 20380652 -65057828 + AluJo SINE Alu 1 301 -11 2088 118 3 0 chr17 20381058 20381347 -65057133 - AluSx SINE Alu -22 290 1 2195 115 3 19 chr17 20381383 20381697 -65056783 + AluSc SINE Alu 1 309 0 580 305 125 9 chr17 20381879 20382207 -65056273 - MLT1L LTR MaLR -245 370 5 633 259 155 0 chr17 20382280 20382473 -65056007 - MER58A DNA MER1_type 0 224 2 366 309 130 57 chr17 20382841 20383388 -65055092 - L2 LINE L2 -787 2527 1941 2345 68 0 13 chr17 20384395 20384706 -65053774 - AluY SINE Alu -4 307 1 523 269 9 0 chr17 20384722 20384830 -65053650 - FAM SINE Alu -76 109 1 2708 172 17 50 chr17 20385191 20385772 -65052708 - MER68 LTR ERV1 0 562 1 2073 167 19 19 chr17 20386357 20386771 -65051709 - L1MC1 LINE L1 -14 6319 5906 604 140 0 0 chr17 20387749 20387842 -65050638 - Tigger7 DNA MER2_type 0 2487 2395 22 0 0 0 chr17 20388556 20388578 -65049902 + AT_rich Low_complexity Low_complexity 1 22 0 348 221 0 0 chr17 20388579 20388674 -65049806 - Charlie1 DNA MER1_type -45 2716 2622 2460 43 3 16 chr17 20388683 20388986 -65049494 + AluY SINE Alu 1 299 -12 23 54 0 0 chr17 20389227 20389264 -65049216 + AT_rich Low_complexity Low_complexity 1 37 0 2100 116 0 10 chr17 20390325 20390619 -65047861 + AluSg SINE Alu 16 306 -4 224 200 22 0 chr17 20391191 20391236 -65047244 + L2 LINE L2 3263 3308 -5 28 29 0 0 chr17 20391456 20391491 -65046989 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 20392183 20392211 -65046269 + AT_rich Low_complexity Low_complexity 1 28 0 2181 137 0 12 chr17 20394576 20394898 -65043582 + 7SLRNA srpRNA srpRNA 3 320 0 189 74 0 0 chr17 20395647 20395674 -65042806 + (A)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr17 20395994 20396021 -65042459 + AT_rich Low_complexity Low_complexity 1 27 0 2231 129 7 0 chr17 20396360 20396670 -65041810 + AluSp SINE Alu 1 312 -1 446 277 105 49 chr17 20396762 20397087 -65041393 + L1MC/D LINE L1 5387 5659 -462 302 324 73 29 chr17 20397160 20397296 -65041184 + L1MC/D LINE L1 5679 5820 -1988 295 261 0 0 chr17 20397645 20397710 -65040770 - MER58A DNA MER1_type 0 224 160 328 315 11 0 chr17 20397716 20397805 -65040675 - MER58A DNA MER1_type -17 90 1 2973 289 99 29 chr17 20398377 20399793 -65038687 + L2 LINE L2 1778 3307 -6 186 43 0 0 chr17 20400757 20400780 -65037700 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2438 41 41 0 chr17 20401347 20401641 -65036839 - AluY SINE Alu -5 306 1 2241 96 17 0 chr17 20401646 20401947 -65036533 - AluSc SINE Alu -3 306 1 451 283 179 31 chr17 20402707 20402930 -65035550 - L2 LINE L2 -1407 1907 1652 2302 123 0 0 chr17 20403390 20403700 -65034780 - AluSg SINE Alu 0 310 1 21 0 0 0 chr17 20403707 20403728 -65034752 + AT_rich Low_complexity Low_complexity 1 21 0 183 162 0 0 chr17 20403835 20403872 -65034608 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 736 255 32 37 chr17 20404086 20404302 -65034178 + MIR SINE MIR 23 237 -25 231 303 36 85 chr17 20405470 20405635 -65032845 + L2 LINE L2 2586 2742 -572 359 241 149 14 chr17 20405757 20405898 -65032582 - L1MA10 LINE L1 -9 6325 6166 855 226 4 32 chr17 20405905 20406153 -65032327 - L1MC/D LINE L1 -2192 5662 5422 624 271 68 0 chr17 20406266 20406443 -65032037 - MER58A DNA MER1_type -34 190 2 3146 230 94 70 chr17 20406443 20406927 -65031553 - L1MC/D LINE L1 -1923 4292 3821 2701 160 14 14 chr17 20406927 20407439 -65031041 - L1MC1 LINE L1 -1 6332 5821 3146 230 94 70 chr17 20407439 20408045 -65030435 - L1MC/D LINE L1 -2394 3821 3231 1867 173 43 6 chr17 20408045 20408397 -65030083 - MLT1A1 LTR MaLR 0 365 1 3146 230 94 70 chr17 20408397 20408811 -65029669 - L1MC/D LINE L1 -2984 3231 2737 2189 48 100 0 chr17 20408811 20409082 -65029398 + AluY SINE Alu 1 298 -13 3146 230 94 70 chr17 20409082 20409312 -65029168 - L1MC/D LINE L1 -3478 2737 2514 1157 61 0 0 chr17 20409351 20409483 -65028997 - AluY SINE Alu -179 132 1 1291 253 42 48 chr17 20409504 20410029 -65028451 - L1MC/D LINE L1 -3879 2517 1995 1676 114 19 4 chr17 20410029 20410291 -65028189 + L1PB1 LINE L1 5879 6144 -7 1291 253 42 48 chr17 20410291 20410343 -65028137 - L1MC/D LINE L1 -4401 1995 1944 312 221 19 10 chr17 20410478 20410582 -65027898 - L1MC/D LINE L1 -5264 1132 1028 1475 303 68 12 chr17 20410626 20411290 -65027190 - L1MC/D LINE L1 -5656 740 40 437 307 184 27 chr17 20411296 20411628 -65026852 + L2 LINE L2 2929 3312 -1 1095 226 63 19 chr17 20412257 20412527 -65025953 - AluJo SINE Alu -30 282 1 5377 112 26 10 chr17 20412774 20413742 -65024738 - L1PB3 LINE L1 0 6154 5157 1823 123 11 0 chr17 20413745 20414014 -65024466 - AluSp SINE Alu 0 313 42 493 62 0 0 chr17 20414016 20414081 -65024399 + Alu SINE Alu 240 304 -8 234 0 0 0 chr17 20414081 20414107 -65024373 + (TA)n Simple_repeat Simple_repeat 2 27 0 610 103 0 10 chr17 20414107 20414204 -65024276 - L1PB3 LINE L1 -34 6120 6025 813 165 0 0 chr17 20414224 20414345 -65024135 - FLAM_C SINE Alu -11 132 12 3406 191 68 6 chr17 20414355 20414946 -65023534 - L1PB3 LINE L1 -1144 5002 4342 207 114 0 0 chr17 20414946 20414981 -65023499 + (TTG)n Simple_repeat Simple_repeat 3 37 0 3406 191 68 6 chr17 20414981 20415231 -65023249 - L1PB3 LINE L1 -1804 4342 4109 351 0 0 0 chr17 20416980 20417019 -65021461 + (CA)n Simple_repeat Simple_repeat 2 40 0 2024 81 0 11 chr17 20417482 20417753 -65020727 + AluY SINE Alu 40 307 -4 1852 154 3 13 chr17 20418079 20418378 -65020102 + AluJb SINE Alu 1 296 -16 225 0 0 0 chr17 20420454 20420479 -65018001 + (T)n Simple_repeat Simple_repeat 1 25 0 1095 73 0 0 chr17 20420498 20420634 -65017846 - AluSq/x SINE Alu -177 136 1 406 327 59 0 chr17 20420896 20421049 -65017431 - L2 LINE L2 -431 2883 2722 27 62 0 0 chr17 20421679 20421727 -65016753 + AT_rich Low_complexity Low_complexity 1 48 0 699 147 7 33 chr17 20422231 20422381 -65016099 - L1MB8 LINE L1 -1 6177 6032 3511 163 27 14 chr17 20422386 20423153 -65015327 - L1MB8 LINE L1 -208 5970 5188 28 29 0 0 chr17 20423160 20423195 -65015285 + AT_rich Low_complexity Low_complexity 1 35 0 864 142 8 0 chr17 20423195 20423315 -65015165 - FLAM_C SINE Alu -22 121 1 1180 196 146 5 chr17 20423317 20423695 -65014785 - L1MB8 LINE L1 -945 5201 4771 832 262 104 17 chr17 20425060 20425487 -65012993 - MLT1G1 LTR MaLR -2 593 45 603 246 0 0 chr17 20425530 20425656 -65012824 - FLAM_A SINE Alu -16 126 1 915 138 17 6 chr17 20425660 20425841 -65012639 - L1MA5 LINE L1 0 6300 6118 1160 118 0 6 chr17 20425851 20426012 -65012468 + AluSg/x SINE Alu 136 295 -17 3569 172 30 45 chr17 20426012 20427546 -65010934 - L1MA5 LINE L1 -192 6108 4600 4615 151 22 30 chr17 20427588 20428624 -65009856 - L1PA16 LINE L1 -1 6816 5792 180 111 0 0 chr17 20428626 20428653 -65009827 + (T)n Simple_repeat Simple_repeat 1 27 0 392 241 12 56 chr17 20430134 20430296 -65008184 + CT-rich Low_complexity Low_complexity 2 156 0 8775 239 44 51 chr17 20430791 20431917 -65006563 - L1PA16 LINE L1 -998 5799 4666 735 181 0 40 chr17 20431917 20432066 -65006414 - FLAM_C SINE Alu 0 143 1 8775 239 44 51 chr17 20432066 20432856 -65005624 - L1PA16 LINE L1 -2131 4666 3872 258 32 0 0 chr17 20432856 20432887 -65005593 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 8775 239 44 51 chr17 20432887 20435197 -65003283 - L1PA16 LINE L1 -2925 3872 1495 2263 124 0 12 chr17 20435936 20436274 -65002206 + MER1B DNA MER1_type 4 337 0 270 335 7 40 chr17 20436385 20436537 -65001943 - L1PA16 LINE L1 -5278 1509 1363 931 343 33 23 chr17 20436574 20437149 -65001331 - L1PA16 LINE L1 -6206 581 1 1524 177 28 64 chr17 20437170 20437640 -65000840 - L1 LINE L1 -1536 5672 5220 * 5986 235 80 28 chr17 20437633 20439423 -64999057 - L1 LINE L1 -2399 4809 3112 1922 168 0 10 chr17 20439423 20439733 -64998747 - AluSx SINE Alu -5 307 1 5986 235 80 28 chr17 20439733 20441669 -64996811 - L1 LINE L1 -4096 3112 841 787 240 5 0 chr17 20441761 20441971 -64996509 - L1 LINE L1 -6628 581 13 234 268 0 14 chr17 20443131 20443202 -64995278 + Tigger5 DNA MER2_type 2249 2318 -5 322 250 0 25 chr17 20443220 20443300 -64995180 - Tigger5 DNA MER2_type -2244 79 2 981 279 131 24 chr17 20443704 20444170 -64994310 - MLT1G1 LTR MaLR -37 558 2 2197 67 19 48 chr17 20444922 20445234 -64993246 + AluY SINE Alu 1 303 -8 504 184 9 0 chr17 20447386 20447495 -64990985 - L1MA9 LINE L1 -39 6273 6164 894 196 0 46 chr17 20449139 20449312 -64989168 + FAM SINE Alu 2 166 -9 1710 131 3 79 chr17 20449807 20450181 -64988299 - MER4A LTR ERV1 0 664 261 569 124 21 10 chr17 20450181 20450278 -64988202 - MER4A LTR ERV1 -566 98 1 2095 118 9 32 chr17 20450350 20450665 -64987815 + AluSx SINE Alu 1 308 -4 2203 104 0 0 chr17 20450907 20451196 -64987284 + AluSx SINE Alu 6 294 -18 2302 114 0 0 chr17 20452185 20452493 -64985987 - AluSg SINE Alu 0 310 3 2341 76 0 0 chr17 20452506 20452821 -64985659 - AluY SINE Alu 0 311 1 341 266 53 26 chr17 20452901 20453014 -64985466 + MIR3 SINE MIR 45 160 -48 279 289 159 72 chr17 20454833 20455332 -64983148 + L2 LINE L2 2745 3272 0 1597 194 7 3 chr17 20455532 20455864 -64982616 + AluJb SINE Alu 1 333 0 1225 235 119 12 chr17 20456627 20457057 -64981423 - L1MC4 LINE L1 -150 7892 7417 7701 145 10 1 chr17 20457076 20459194 -64979286 - L1PA11 LINE L1 -1 7611 5484 13036 182 13 20 chr17 20459195 20460761 -64977719 + L1PB1 LINE L1 2801 4377 -2490 2107 150 22 30 chr17 20460761 20461128 -64977352 + THE1B LTR MaLR 1 364 0 13036 182 13 20 chr17 20461128 20463665 -64974815 + L1PB1 LINE L1 4377 6865 -2 9009 226 16 17 chr17 20463670 20466385 -64972095 - L1PA11 LINE L1 -2932 4652 1130 700 126 42 48 chr17 20466408 20466575 -64971905 - L1MC4 LINE L1 -635 7407 7242 986 201 48 92 chr17 20466666 20467057 -64971423 - L1MD3 LINE L1 0 8041 7682 407 221 2 4 chr17 20467105 20467212 -64971268 - L1PA13 LINE L1 -5073 1388 1283 2141 254 107 70 chr17 20467214 20468221 -64970259 - L1MC4a LINE L1 -250 7558 6515 850 205 44 44 chr17 20468222 20468427 -64970053 - Tigger2 DNA MER2_type -3 2715 2511 484 191 0 0 chr17 20468427 20468521 -64969959 - L1 LINE L1 -1458 4688 4595 * 800 206 0 0 chr17 20468518 20468688 -64969792 + L1P LINE L1 4724 4893 -1253 2483 127 27 11 chr17 20468689 20469316 -64969164 - L1P4 LINE L1 -529 5636 5000 395 143 0 0 chr17 20469316 20469372 -64969108 - AluJ/FLAM SINE Alu -245 57 2 1031 104 0 0 chr17 20470678 20470813 -64967667 + AluSp/q SINE Alu 157 291 -22 2269 98 3 0 chr17 20470821 20471159 -64967321 + AluSp SINE Alu 1 339 0 307 287 66 29 chr17 20472205 20472341 -64966139 + Charlie8 DNA MER1_type 1 141 -2276 1259 166 9 37 chr17 20472988 20473205 -64965275 - AluJb SINE Alu -25 287 77 1721 154 0 4 chr17 20473238 20473497 -64964983 + AluJb SINE Alu 1 258 -54 281 121 0 17 chr17 20473597 20473655 -64964825 + AluSp/q SINE Alu 243 299 -4 225 233 240 53 chr17 20474072 20474222 -64964258 + MIR SINE MIR 70 247 -15 2332 185 73 14 chr17 20475988 20476507 -64961973 + MER68 LTR ERV1 1 550 -12 677 138 14 51 chr17 20477279 20477417 -64961063 + FLAM_C SINE Alu 1 133 0 413 279 157 34 chr17 20477913 20478207 -64960273 + L1MC4a LINE L1 5630 5959 -1849 285 69 103 0 chr17 20478208 20478295 -64960185 + (TA)n Simple_repeat Simple_repeat 2 97 0 304 251 48 36 chr17 20478462 20478629 -64959851 + L1MC4a LINE L1 6116 6284 -1524 2213 117 0 0 chr17 20478644 20478935 -64959545 - AluSg SINE Alu -18 292 2 1046 167 97 147 chr17 20479482 20479677 -64958803 + L1MC5 LINE L1 6732 6935 -1026 1737 183 6 6 chr17 20479677 20479989 -64958491 + AluJb SINE Alu 1 312 0 1046 167 97 147 chr17 20479989 20480277 -64958203 + L1MC5 LINE L1 6935 7191 -770 669 186 174 12 chr17 20480292 20480453 -64958027 - MER20 DNA MER1_type 0 219 33 757 179 201 22 chr17 20480470 20480502 -64957978 + L1MC5 LINE L1 7203 7228 -733 333 0 0 0 chr17 20480502 20480539 -64957941 + (CA)n Simple_repeat Simple_repeat 2 38 0 757 179 201 22 chr17 20480539 20480774 -64957706 + L1MC5 LINE L1 7228 7518 -443 2344 102 0 0 chr17 20480976 20481269 -64957211 + AluSp SINE Alu 1 293 -20 417 39 0 0 chr17 20481287 20481338 -64957142 + (TG)n Simple_repeat Simple_repeat 2 52 0 223 269 51 0 chr17 20481456 20481534 -64956946 + MIR3 SINE MIR 83 164 -44 252 276 26 0 chr17 20481546 20481622 -64956858 + MER116 DNA Mariner 2 79 -1 1452 108 0 0 chr17 20481965 20482150 -64956330 - AluSq SINE Alu -128 185 1 285 75 0 0 chr17 20483558 20483598 -64954882 + (T)n Simple_repeat Simple_repeat 1 40 0 21 36 0 0 chr17 20484510 20484538 -64953942 + AT_rich Low_complexity Low_complexity 1 28 0 199 349 16 0 chr17 20484975 20485038 -64953442 - MIR SINE MIR -185 77 14 2310 95 0 3 chr17 20485189 20485485 -64952995 - AluY SINE Alu -14 297 3 1587 160 46 0 chr17 20485489 20485752 -64952728 - AluSx SINE Alu -18 294 20 202 332 61 19 chr17 20485772 20485986 -64952494 + L2 LINE L2 1864 2086 -1228 251 256 26 0 chr17 20486212 20486290 -64952190 - L1MC4 LINE L1 -141 7901 7822 1856 140 46 0 chr17 20486294 20486579 -64951901 - AluSx SINE Alu -14 298 1 411 237 126 26 chr17 20486582 20486772 -64951708 - L1MC4 LINE L1 -724 7318 7110 2296 100 3 3 chr17 20486786 20487086 -64951394 - AluSc SINE Alu -9 300 1 2137 142 0 0 chr17 20487104 20487399 -64951081 - AluSg SINE Alu -15 295 1 606 140 10 0 chr17 20487408 20487508 -64950972 - AluJo/FRAM SINE Alu -9 303 203 1257 153 5 10 chr17 20487510 20487713 -64950767 - AluSx SINE Alu -78 234 33 1107 129 16 5 chr17 20487758 20487944 -64950536 - AluSg/x SINE Alu -4 305 118 864 162 7 26 chr17 20488045 20488199 -64950281 - AluJb SINE Alu -159 153 3 325 181 0 83 chr17 20488241 20488313 -64950167 - AluJ/FLAM SINE Alu -245 57 1 2701 169 17 117 chr17 20488613 20489209 -64949271 + LTR34 LTR ERV1 4 507 -192 2305 92 3 0 chr17 20489209 20489503 -64948977 - AluSp SINE Alu -18 295 1 2701 169 17 117 chr17 20489503 20489677 -64948803 + LTR34 LTR ERV1 507 697 -2 25 31 0 0 chr17 20489702 20489734 -64948746 + AT_rich Low_complexity Low_complexity 1 32 0 442 187 19 47 chr17 20489755 20489862 -64948618 + L1MC/D LINE L1 5158 5261 -885 699 224 19 9 chr17 20489915 20490129 -64948351 + L1MC/D LINE L1 5259 5474 -2311 1202 202 40 78 chr17 20490224 20490595 -64947885 - MSTD LTR MaLR -39 357 1 385 77 10 34 chr17 20490744 20490810 -64947670 - AluSp/q SINE Alu -7 296 240 2616 152 23 9 chr17 20490923 20491364 -64947116 + MLT1C LTR MaLR 21 467 0 1954 150 6 13 chr17 20491571 20491885 -64946595 + AluJb SINE Alu 1 312 0 1298 169 0 5 chr17 20491977 20492178 -64946302 - AluJo SINE Alu -108 204 5 2184 116 10 0 chr17 20492635 20492937 -64945543 + AluSx SINE Alu 1 305 -7 2104 104 0 10 chr17 20492976 20493264 -64945216 + AluSx SINE Alu 21 305 -7 590 195 47 39 chr17 20493681 20493809 -64944671 - FLAM_A SINE Alu -4 129 1 614 267 33 30 chr17 20495054 20495324 -64943156 + L1M4 LINE L1 4195 4465 -1681 2411 74 0 0 chr17 20496144 20496442 -64942038 - AluY SINE Alu -12 299 2 1965 143 6 16 chr17 20496599 20496914 -64941566 + AluSx SINE Alu 1 312 0 2053 111 0 81 chr17 20496934 20497075 -64941405 + AluSx SINE Alu 1 152 -160 2447 68 3 3 chr17 20497075 20497386 -64941094 + AluY SINE Alu 1 311 0 2053 111 0 81 chr17 20497386 20497578 -64940902 + AluSx SINE Alu 152 307 -5 216 333 16 0 chr17 20497732 20497795 -64940685 + MIR SINE MIR 14 77 -185 1912 156 0 7 chr17 20498918 20499219 -64939261 + AluJb SINE Alu 5 303 -9 2089 121 10 22 chr17 20499345 20499659 -64938821 - AluSx SINE Alu -2 310 1 225 279 0 33 chr17 20501132 20501193 -64937287 - Charlie6 DNA MER1_type -1185 2315 2257 2667 35 0 13 chr17 20501700 20502015 -64936465 + AluY SINE Alu 1 311 0 2932 160 45 37 chr17 20502431 20502695 -64935785 + L1MC4 LINE L1 6976 7236 -806 2266 117 0 0 chr17 20502695 20503003 -64935477 + AluSx SINE Alu 1 308 -4 2932 160 45 37 chr17 20503003 20503387 -64935093 + L1MC4 LINE L1 7236 7629 -413 452 172 0 0 chr17 20503393 20503480 -64935000 + L1MC4 LINE L1 7754 7840 -202 1466 82 16 0 chr17 20503482 20503666 -64934814 + AluSq SINE Alu 1 187 -126 642 96 0 11 chr17 20503666 20503760 -64934720 + AluSg/x SINE Alu 217 309 0 377 169 5 244 chr17 20503760 20503973 -64934507 + L1MC4 LINE L1 7824 7985 -57 2029 134 0 0 chr17 20503973 20504257 -64934223 - AluSg SINE Alu -12 298 15 1941 102 12 65 chr17 20504784 20505107 -64933373 + AluY SINE Alu 6 311 0 2424 100 0 0 chr17 20505126 20505436 -64933044 + AluSg SINE Alu 1 310 0 20149 44 2 2 chr17 20505855 20509103 -64929377 + L1PA5 LINE L1 2933 6154 0 2145 88 14 3 chr17 20509381 20509678 -64928802 + AluSc SINE Alu 1 300 -9 1489 178 0 45 chr17 20510155 20510447 -64928033 + AluJb SINE Alu 1 279 -33 920 158 36 81 chr17 20510545 20510767 -64927713 - L1MA8 LINE L1 -25 6266 6055 2608 53 0 0 chr17 20510980 20511281 -64927199 - AluY SINE Alu -10 301 1 474 284 7 0 chr17 20511843 20511984 -64926496 + L1ME3A LINE L1 2681 2822 -3324 566 245 155 23 chr17 20512009 20512274 -64926206 + L1ME3A LINE L1 4647 4946 -1200 1379 143 113 0 chr17 20512638 20512869 -64925611 - AluJb SINE Alu -55 257 1 375 62 250 0 chr17 20512930 20512994 -64925486 - MADE1 DNA Mariner 0 80 1 806 219 10 42 chr17 20513011 20513203 -64925277 - MER58A DNA MER1_type -9 215 30 2043 131 0 0 chr17 20513884 20514188 -64924292 - AluSx SINE Alu 0 304 1 25 95 0 0 chr17 20514191 20514265 -64924215 + AT_rich Low_complexity Low_complexity 1 74 0 26 0 0 0 chr17 20514336 20514362 -64924118 + AT_rich Low_complexity Low_complexity 1 26 0 2355 76 0 41 chr17 20514425 20514740 -64923740 - AluY SINE Alu -9 302 1 366 237 10 0 chr17 20514747 20514844 -64923636 + L1ME3A LINE L1 5083 5180 -966 10033 22 4 205 chr17 20514849 20516535 -64921945 - SVA Other Other -5 1381 35 392 225 49 21 chr17 20516627 20516769 -64921711 + L1ME3A LINE L1 5187 5332 -814 1594 287 38 9 chr17 20516821 20517371 -64921109 + L1ME3A LINE L1 5319 5884 -286 579 129 0 0 chr17 20517371 20517464 -64921016 + LTR9B LTR ERV1 468 560 -84 2070 118 4 0 chr17 20517744 20518049 -64920431 + AluSx SINE Alu 1 282 -30 3377 128 31 26 chr17 20518334 20518912 -64919568 + LTR35 LTR ERV1 38 618 0 283 353 60 9 chr17 20518912 20519028 -64919452 - MER91A DNA MER1_type -27 169 48 1521 164 73 4 chr17 20519663 20519775 -64918705 + AluJo SINE Alu 7 110 -202 306 0 0 0 chr17 20519775 20519809 -64918671 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1521 164 73 4 chr17 20519809 20519970 -64918510 + AluJo SINE Alu 110 299 -13 440 120 15 158 chr17 20520198 20520258 -64918222 - L1MA8 LINE L1 -69 6222 6190 1957 116 41 0 chr17 20520258 20520550 -64917930 - AluSg SINE Alu -6 304 1 440 120 15 158 chr17 20520550 20520622 -64917858 - L1MA8 LINE L1 -101 6190 6109 2310 78 0 0 chr17 20520629 20520924 -64917556 - AluY SINE Alu -16 295 1 261 0 0 0 chr17 20521185 20521214 -64917266 + (CA)n Simple_repeat Simple_repeat 2 30 0 41 21 0 0 chr17 20521313 20521361 -64917119 + GC_rich Low_complexity Low_complexity 1 48 0 22 70 0 0 chr17 20521416 20521459 -64917021 + GC_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr17 20523337 20523358 -64915122 + AT_rich Low_complexity Low_complexity 1 21 0 295 47 0 0 chr17 20523805 20523848 -64914632 + AluY SINE Alu 257 299 -1 658 205 0 8 chr17 20526991 20527118 -64911362 + AluJb SINE Alu 87 212 -100 3127 175 56 24 chr17 20527207 20527491 -64910989 - L1MB3 LINE L1 -2 6182 5909 2312 91 7 0 chr17 20527491 20527798 -64910682 - AluSx SINE Alu -3 309 1 3127 175 56 24 chr17 20527798 20528211 -64910269 - L1MB3 LINE L1 -275 5909 5443 1325 273 138 24 chr17 20528664 20528716 -64909764 - L1ME2 LINE L1 -12 6152 6107 1658 163 10 7 chr17 20528716 20529011 -64909469 - AluJo SINE Alu -16 296 1 1325 273 138 24 chr17 20529011 20529470 -64909010 - L1ME2 LINE L1 -57 6107 5561 1805 142 6 22 chr17 20529470 20529787 -64908693 - AluJb SINE Alu 0 312 1 1325 273 138 24 chr17 20529787 20529868 -64908612 - L1ME2 LINE L1 -603 5561 5491 364 210 74 0 chr17 20530651 20530732 -64907748 + MIR3 SINE MIR 68 154 -54 201 224 171 13 chr17 20531537 20531613 -64906867 + MIR SINE MIR 9 96 -166 2542 46 0 0 chr17 20532488 20532793 -64905687 + AluY SINE Alu 1 305 -6 1655 164 7 32 chr17 20532859 20533169 -64905311 - AluJo SINE Alu -10 302 1 723 310 88 56 chr17 20533285 20533782 -64904698 + L1ME LINE L1 3694 4206 -1940 249 33 0 0 chr17 20534125 20534155 -64904325 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 0 0 0 chr17 20534168 20534193 -64904287 + (CA)n Simple_repeat Simple_repeat 2 26 0 3905 227 163 70 chr17 20534273 20535244 -64903236 + HAL1 LINE L1 14 894 -1613 2358 103 42 3 chr17 20535244 20535604 -64902876 + L1MB2 LINE L1 5794 6167 -4 3905 227 163 70 chr17 20535604 20536472 -64902008 + HAL1 LINE L1 894 2088 -419 2096 111 10 0 chr17 20536472 20536770 -64901710 + AluSx SINE Alu 1 301 -11 3905 227 163 70 chr17 20536770 20537113 -64901367 + HAL1 LINE L1 2088 2398 -109 313 295 100 16 chr17 20537416 20537606 -64900874 + L1ME LINE L1 5487 5692 -429 1353 208 0 24 chr17 20537660 20537949 -64900531 - AluJo SINE Alu -30 282 1 3693 146 11 22 chr17 20538004 20539099 -64899381 - L1MA4A LINE L1 -284 6019 4970 1008 182 27 23 chr17 20539103 20539323 -64899157 + L1 LINE L1 3835 4055 -2091 222 91 0 0 chr17 20539655 20539688 -64898792 + (CTTTG)n Simple_repeat Simple_repeat 3 35 0 641 113 0 9 chr17 20539691 20539797 -64898683 + (TTCC)n Simple_repeat Simple_repeat 4 108 0 1947 141 6 10 chr17 20539809 20540122 -64898358 - AluSx SINE Alu 0 312 1 2424 57 0 0 chr17 20540502 20540801 -64897679 - AluY SINE Alu -12 299 1 2180 107 0 3 chr17 20540801 20541101 -64897379 - AluY SINE Alu -12 299 1 244 308 15 0 chr17 20541220 20541285 -64897195 - L2 LINE L2 -20 3252 3187 2153 87 7 0 chr17 20542240 20542526 -64895954 - AluSc SINE Alu -21 288 1 1624 150 29 29 chr17 20543747 20543859 -64894621 + AluJo SINE Alu 1 112 -200 2668 130 34 0 chr17 20543859 20544273 -64894207 - MSTA LTR MaLR 0 428 1 1624 150 29 29 chr17 20544273 20544467 -64894013 + AluJo SINE Alu 111 307 -5 296 236 0 34 chr17 20547481 20547570 -64890910 + MIR SINE MIR 81 166 -96 261 0 0 0 chr17 20548104 20548133 -64890347 + (A)n Simple_repeat Simple_repeat 1 29 0 458 81 32 0 chr17 20549069 20549131 -64889349 + AluSg/x SINE Alu 164 227 -83 180 0 0 0 chr17 20549143 20549163 -64889317 + (A)n Simple_repeat Simple_repeat 1 20 0 1802 147 26 16 chr17 20549459 20549766 -64888714 + AluSg SINE Alu 1 310 0 180 243 0 0 chr17 20550602 20550639 -64887841 - L2 LINE L2 -87 3185 3149 447 200 67 0 chr17 20551331 20551421 -64887059 - MER45A DNA AcHobo -52 126 31 1732 185 119 29 chr17 20551634 20552055 -64886425 - LTR2B LTR ERV1 0 490 32 719 165 0 47 chr17 20552154 20552281 -64886199 - FLAM_A SINE Alu -10 132 12 224 358 108 8 chr17 20552309 20552429 -64886051 - MIR3 SINE MIR -7 201 70 660 176 59 17 chr17 20552840 20552959 -64885521 + FLAM_C SINE Alu 1 124 -9 3319 138 14 31 chr17 20553566 20554139 -64884341 + L1MB1 LINE L1 5367 5929 -239 8892 127 51 8 chr17 20554165 20555517 -64882963 - THE1C-int LTR MaLR -170 1410 1 1582 117 53 148 chr17 20555519 20555931 -64882549 - THE1C LTR MaLR -2 373 1 1100 109 81 101 chr17 20555932 20556064 -64882416 + L1MB1 LINE L1 5926 6052 -116 1291 98 57 0 chr17 20556064 20556257 -64882223 + L1PA16 LINE L1 5953 6157 -9 1100 109 81 101 chr17 20556257 20556372 -64882108 + L1MB1 LINE L1 6052 6168 0 733 226 28 77 chr17 20556572 20556721 -64881759 + MIR SINE MIR 51 186 -76 2165 108 3 3 chr17 20556721 20557028 -64881452 + AluSx SINE Alu 1 307 -5 733 226 28 77 chr17 20557028 20557099 -64881381 + MIR SINE MIR 186 259 -3 1814 247 68 56 chr17 20557357 20557698 -64880782 - L1MCa LINE L1 -2030 4396 4061 2141 78 7 0 chr17 20557698 20558009 -64880471 + AluSp SINE Alu 1 313 0 1814 247 68 56 chr17 20558009 20558574 -64879906 - L1MCa LINE L1 -2365 4061 3478 673 306 74 50 chr17 20558576 20559571 -64878909 - L1MCa LINE L1 -4669 1938 829 261 248 68 30 chr17 20559833 20559966 -64878514 + L1M4 LINE L1 5262 5399 -747 256 261 136 45 chr17 20560608 20560784 -64877696 + LTR67 LTR ERVL 358 549 -8 390 254 15 90 chr17 20560979 20561113 -64877367 - L2 LINE L2 -1 3312 3189 195 69 0 0 chr17 20561185 20561214 -64877266 + (CA)n Simple_repeat Simple_repeat 2 30 0 2387 69 3 0 chr17 20561828 20562131 -64876349 - AluY SINE Alu -7 304 1 558 67 0 0 chr17 20565041 20565116 -64873364 + (TG)n Simple_repeat Simple_repeat 2 76 0 1958 126 19 13 chr17 20565185 20565495 -64872985 + AluSx SINE Alu 1 312 0 402 105 0 7 chr17 20565503 20565564 -64872916 + Alu SINE Alu 3 55 -246 1336 201 0 19 chr17 20565565 20565833 -64872647 - AluJb SINE Alu -49 263 1 2131 135 78 66 chr17 20565981 20566313 -64872167 + MSTA LTR MaLR 1 328 -100 2217 93 0 7 chr17 20566313 20566614 -64871866 - AluY SINE Alu -11 300 2 2131 135 78 66 chr17 20566614 20566661 -64871819 + MSTA LTR MaLR 328 373 -55 2044 137 0 0 chr17 20566661 20566961 -64871519 - AluSx SINE Alu -12 300 1 2131 135 78 66 chr17 20566961 20567003 -64871477 + MSTA LTR MaLR 373 428 0 242 281 288 13 chr17 20567017 20567170 -64871310 - MIR SINE MIR -30 232 38 885 165 0 0 chr17 20567715 20567848 -64870632 - AluSq/x SINE Alu -180 133 1 188 246 16 16 chr17 20568106 20568167 -64870313 + L2 LINE L2 2921 2981 -332 26 30 0 0 chr17 20569254 20569287 -64869193 + AT_rich Low_complexity Low_complexity 1 33 0 2090 108 10 10 chr17 20569287 20569575 -64868905 - AluSx SINE Alu -24 288 1 306 87 0 0 chr17 20569995 20570041 -64868439 + (TG)n Simple_repeat Simple_repeat 1 46 0 1536 211 13 0 chr17 20570238 20570536 -64867944 + AluJb SINE Alu 1 302 -10 349 311 108 37 chr17 20570573 20570837 -64867643 + L1ME4a LINE L1 5257 5501 -620 2518 62 0 3 chr17 20570837 20571143 -64867337 + AluY SINE Alu 1 305 -6 349 311 108 37 chr17 20571143 20571587 -64866893 + L1ME4a LINE L1 5501 6024 -97 2388 81 7 0 chr17 20572025 20572320 -64866160 + AluY SINE Alu 1 297 -14 3535 83 26 14 chr17 20573076 20573581 -64864899 - MER9 LTR ERVK 0 511 1 184 316 13 13 chr17 20575525 20575604 -64862876 - MIR3 SINE MIR -12 196 118 204 40 0 0 chr17 20577648 20577673 -64860807 + (TCC)n Simple_repeat Simple_repeat 1 25 0 272 342 0 40 chr17 20578688 20578837 -64859643 + MER5B DNA MER1_type 3 145 -33 215 307 10 30 chr17 20579009 20579110 -64859370 - MER5B DNA MER1_type -17 161 63 1452 254 59 61 chr17 20580182 20580571 -64857909 + MER82 DNA MER2_type 199 588 -65 1982 95 84 4 chr17 20580571 20580844 -64857636 + AluSp SINE Alu 1 295 -18 1452 254 59 61 chr17 20580844 20580910 -64857570 + MER82 DNA MER2_type 588 653 0 2281 119 3 0 chr17 20580994 20581296 -64857184 - AluSq SINE Alu -10 303 1 753 233 12 6 chr17 20581836 20581999 -64856481 + FRAM SINE Alu 1 164 -2 307 143 0 14 chr17 20582540 20582610 -64855870 + L1PA16 LINE L1 6080 6148 -18 363 145 12 48 chr17 20583605 20583688 -64854792 + L1 LINE L1 5174 5253 -893 2027 119 3 19 chr17 20583689 20583826 -64854654 + AluSq SINE Alu 1 139 -174 2206 124 0 0 chr17 20583826 20584125 -64854355 + AluSc SINE Alu 1 299 -10 2027 119 3 19 chr17 20584125 20584298 -64854182 + AluSq SINE Alu 139 306 -7 5626 221 41 56 chr17 20584307 20585451 -64853029 + L1MB7 LINE L1 2425 3585 -2561 2394 99 7 0 chr17 20585451 20585755 -64852725 + AluSp SINE Alu 1 306 -7 5626 221 41 56 chr17 20585755 20586124 -64852356 + L1MB7 LINE L1 3585 3907 -2239 2367 103 0 6 chr17 20586124 20586435 -64852045 + AluY SINE Alu 1 309 -2 5626 221 41 56 chr17 20586435 20586777 -64851703 + L1MB7 LINE L1 3907 4253 -1893 1612 215 36 34 chr17 20586775 20587193 -64851287 + L1MB7 LINE L1 4879 5297 -849 * 3943 178 66 41 chr17 20587485 20588402 -64850078 + L1MB7 LINE L1 5256 6177 -7 307 306 56 28 chr17 20588413 20588557 -64849923 + L1MC4a LINE L1 6058 6205 -1603 496 181 143 0 chr17 20589137 20589242 -64849238 + MER103 DNA DNA 1 120 -46 370 273 39 54 chr17 20589963 20590168 -64848312 + L2 LINE L2 2902 3103 -169 555 290 52 13 chr17 20590174 20590405 -64848075 + MIR SINE MIR 7 246 -16 23 33 0 0 chr17 20590796 20590826 -64847654 + AT_rich Low_complexity Low_complexity 1 30 0 2415 60 7 17 chr17 20590948 20591250 -64847230 + AluY SINE Alu 1 299 -12 235 269 77 48 chr17 20591253 20591461 -64847019 + L1M4 LINE L1 3723 3936 -2210 1207 63 7 0 chr17 20591513 20591655 -64846825 + AluSp SINE Alu 1 143 -170 2190 99 3 3 chr17 20591655 20591947 -64846533 + AluSq SINE Alu 12 303 -10 323 286 139 54 chr17 20591949 20592302 -64846178 + L1M4 LINE L1 3982 4364 -1782 402 269 86 46 chr17 20593934 20594162 -64844318 + L1M4 LINE L1 2963 3209 -2937 2415 81 0 0 chr17 20594162 20594457 -64844023 + AluY SINE Alu 1 295 -16 402 269 86 46 chr17 20594457 20594552 -64843928 + L1M4 LINE L1 3209 3299 -2847 921 108 8 8 chr17 20594674 20594803 -64843677 + AluSq/x SINE Alu 1 129 -184 2077 104 30 10 chr17 20594805 20595103 -64843377 + AluSg SINE Alu 4 307 -3 628 284 54 31 chr17 20595120 20595567 -64842913 + L1M4 LINE L1 3441 3897 -2249 2271 178 60 8 chr17 20597058 20597647 -64840833 - L1PB4 LINE L1 0 6161 5514 908 206 20 10 chr17 20597634 20597838 -64840642 - L1PB4 LINE L1 -1067 5079 4874 * 536 275 52 34 chr17 20597854 20598123 -64840357 - L1MCa LINE L1 -1983 4443 4170 25 51 0 0 chr17 20599532 20599571 -64838909 + AT_rich Low_complexity Low_complexity 1 39 0 1220 71 0 30 chr17 20599857 20600025 -64838455 - L1PB1 LINE L1 -7 6144 5982 1843 224 81 35 chr17 20600872 20601729 -64836751 - L1MCa LINE L1 -3223 3203 2316 786 256 13 58 chr17 20601739 20601939 -64836541 - L1MA10 LINE L1 -14 6320 6113 222 37 0 0 chr17 20601939 20601966 -64836514 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 2251 106 0 3 chr17 20601973 20602266 -64836214 - AluSc SINE Alu -17 292 1 786 256 13 58 chr17 20602266 20602369 -64836111 - L1MA10 LINE L1 -227 6107 6023 295 169 68 0 chr17 20602383 20602442 -64836038 - L1MA9 LINE L1 0 6312 6250 749 231 62 54 chr17 20602455 20602774 -64835706 - L1M4 LINE L1 -3849 3108 2783 2276 117 0 0 chr17 20602774 20603083 -64835397 - AluSg1 SINE Alu 0 309 1 749 231 62 54 chr17 20603083 20603192 -64835288 - L1M4 LINE L1 -4174 2783 2676 315 153 68 0 chr17 20603198 20603257 -64835223 + AluS SINE Alu 1 63 -245 844 199 41 0 chr17 20603357 20603528 -64834952 - L1M4 LINE L1 -6675 184 7 317 127 16 16 chr17 20603531 20603594 -64834886 + MLT1E1 LTR MaLR 587 649 -5 2331 87 7 3 chr17 20603765 20604065 -64834415 - AluSp SINE Alu -12 301 1 180 248 238 9 chr17 20604221 20604326 -64834154 - MIR SINE MIR -17 245 117 2056 117 8 72 chr17 20604722 20605082 -64833398 - MER1B DNA MER1_type 0 337 1 774 280 91 35 chr17 20605409 20605895 -64832585 + L1ME4a LINE L1 5608 6120 -1 1560 149 0 0 chr17 20605975 20606203 -64832277 + AluJb SINE Alu 85 312 0 1665 163 48 17 chr17 20608088 20608383 -64830097 - AluJo SINE Alu -7 305 2 2205 141 0 3 chr17 20609341 20609654 -64828826 - AluSx SINE Alu 0 312 1 2214 105 0 54 chr17 20609850 20610165 -64828315 - AluY SINE Alu -13 298 1 416 236 0 0 chr17 20610185 20610291 -64828189 - L1ME2 LINE L1 -6 6156 6053 331 278 146 35 chr17 20611137 20611281 -64827199 + MIR SINE MIR 79 238 -24 2006 133 0 20 chr17 20611382 20611682 -64826798 - AluJb SINE Alu -18 294 1 522 226 73 0 chr17 20611682 20611819 -64826661 + Charlie1 DNA MER1_type 71 217 -2544 468 172 54 0 chr17 20611833 20611926 -64826554 + Charlie1 DNA MER1_type 2634 2731 -30 203 250 52 73 chr17 20611962 20612058 -64826422 + MIR SINE MIR 162 255 -7 1568 173 52 4 chr17 20612989 20613260 -64825220 + AluJo SINE Alu 3 286 -26 2262 101 0 29 chr17 20613806 20614113 -64824367 + AluSx SINE Alu 1 298 -14 2126 111 0 4 chr17 20614171 20614483 -64823997 + AluSc SINE Alu 1 311 0 21 71 0 0 chr17 20616024 20616066 -64822414 + AT_rich Low_complexity Low_complexity 1 42 0 1889 119 6 68 chr17 20617072 20617408 -64821072 + MER1B DNA MER1_type 1 315 -24 1053 224 9 0 chr17 20617466 20617680 -64820800 - MER20 DNA MER1_type 0 219 4 284 327 9 9 chr17 20617707 20617820 -64820660 - L2 LINE L2 -951 2363 2251 325 320 50 50 chr17 20618117 20618298 -64820182 - MIR SINE MIR -54 208 28 180 200 0 0 chr17 20619118 20619163 -64819317 + (TG)n Simple_repeat Simple_repeat 1 45 0 480 277 12 0 chr17 20619205 20619371 -64819109 + (TG)n Simple_repeat Simple_repeat 1 168 0 204 229 16 0 chr17 20619391 20619452 -64819028 + (TG)n Simple_repeat Simple_repeat 1 62 0 224 195 0 0 chr17 20619495 20619536 -64818944 + L2 LINE L2 3016 3056 -216 270 304 0 13 chr17 20619682 20619761 -64818719 + L2 LINE L2 3190 3267 -5 479 202 0 0 chr17 20620170 20620264 -64818216 - MER5A DNA MER1_type -83 106 13 1981 117 37 0 chr17 20620458 20620758 -64817722 + AluY SINE Alu 1 311 0 281 212 188 12 chr17 20620816 20620953 -64817527 + MIR SINE MIR 16 183 -62 182 266 0 62 chr17 20621013 20621077 -64817403 + MIR SINE MIR 93 149 -59 405 286 235 8 chr17 20621170 20621408 -64817072 + L2 LINE L2 3021 3312 -1 263 359 96 13 chr17 20621996 20622152 -64816328 + MIR SINE MIR 13 181 -81 1862 133 0 7 chr17 20622649 20622928 -64815552 - AluSx SINE Alu -35 277 1 358 248 86 34 chr17 20623166 20623283 -64815197 + L1ME4a LINE L1 5559 5681 -440 773 241 6 13 chr17 20623290 20623448 -64815032 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 20623451 20623478 -64815002 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 586 227 94 94 chr17 20623529 20623921 -64814559 + L1ME4a LINE L1 5730 6121 0 828 222 104 83 chr17 20624151 20624611 -64813869 + MER113 DNA MER1_type? 1 470 -51 331 229 171 0 chr17 20624711 20624816 -64813664 + L2 LINE L2 3149 3271 -1 348 283 294 6 chr17 20625239 20625416 -64813064 - MIR SINE MIR -29 233 6 238 331 115 14 chr17 20625560 20625699 -64812781 - L2 LINE L2 -6 3307 3155 382 274 105 20 chr17 20626330 20626483 -64811997 + MIR3 SINE MIR 20 185 -23 447 265 38 0 chr17 20627517 20627649 -64810831 + MIR SINE MIR 56 192 -70 194 261 46 0 chr17 20628546 20628611 -64809869 + L2 LINE L2 3145 3212 -60 263 325 111 0 chr17 20629437 20629554 -64808926 - MIR SINE MIR -1 261 132 760 239 211 28 chr17 20629660 20630020 -64808460 - L2 LINE L2 0 3313 2888 571 258 7 26 chr17 20630078 20630233 -64808247 + MER103 DNA DNA 2 153 -13 362 281 21 0 chr17 20631903 20631999 -64806481 - MER5A DNA MER1_type -77 112 15 676 158 9 0 chr17 20632427 20632541 -64805939 - THE1-int LTR MaLR -527 1053 939 998 155 12 0 chr17 20632590 20632751 -64805729 - AluSg/x SINE Alu -6 306 144 1985 123 3 0 chr17 20632773 20633084 -64805396 - AluSp SINE Alu 0 312 1 204 40 0 0 chr17 20634026 20634051 -64804429 + (TCCC)n Simple_repeat Simple_repeat 2 26 0 182 247 180 34 chr17 20634241 20634330 -64804150 + L2 LINE L2 2605 2706 -608 772 270 17 0 chr17 20634344 20634522 -64803958 - MIR SINE MIR -3 259 79 432 304 83 24 chr17 20634576 20634744 -64803736 - MER5B DNA MER1_type 0 178 1 343 354 40 18 chr17 20634796 20635022 -64803458 + L2 LINE L2 3083 3313 0 251 267 128 0 chr17 20635042 20635128 -64803352 + MIR SINE MIR 44 140 -122 264 333 10 0 chr17 20637872 20637968 -64800512 - MIR SINE MIR -129 133 37 290 280 57 105 chr17 20638314 20638646 -64799834 - L2 LINE L2 -51 3221 2906 221 307 54 18 chr17 20638673 20638839 -64799641 - L2 LINE L2 -464 2850 2679 353 217 50 159 chr17 20639575 20639729 -64798751 - MER102b DNA MER1_type -2187 230 114 701 219 0 0 chr17 20639729 20639848 -64798632 - FLAM_A SINE Alu -13 120 2 353 217 50 159 chr17 20639848 20639951 -64798529 - MER102b DNA MER1_type -2303 114 1 596 266 17 17 chr17 20639962 20640135 -64798345 - MIR SINE MIR -70 192 20 1554 125 129 21 chr17 20640860 20641139 -64797341 - AluSg SINE Alu -1 309 1 2136 107 101 3 chr17 20641141 20641469 -64797011 - L1PA11 LINE L1 -10 6164 5805 612 282 33 33 chr17 20642435 20642680 -64795800 + Tigger8 DNA MER2_type 236 480 -186 1581 160 0 63 chr17 20642683 20643001 -64795479 + AluJo SINE Alu 1 298 -14 265 252 81 27 chr17 20644402 20644513 -64793967 - L2 LINE L2 -46 3226 3110 557 295 72 10 chr17 20645054 20645261 -64793219 + MIR SINE MIR 32 251 -11 641 251 53 48 chr17 20645458 20645665 -64792815 - MER102b DNA MER1_type -7 334 127 1860 165 0 3 chr17 20645739 20646030 -64792450 + AluJb SINE Alu 1 290 -22 522 198 69 45 chr17 20646047 20646249 -64792231 + L1MC5 LINE L1 7711 7917 -44 252 338 0 0 chr17 20646262 20646333 -64792147 - MER102b DNA MER1_type -267 74 4 225 354 24 0 chr17 20646484 20646566 -64791914 + MIR SINE MIR 47 130 -132 1386 191 0 41 chr17 20647024 20647352 -64791128 - AluJo SINE Alu 0 316 1 359 275 62 62 chr17 20647385 20647709 -64790771 + L1MC4a LINE L1 5685 5801 -320 1814 173 86 45 chr17 20647716 20647947 -64790533 + MLT1D LTR MaLR 19 276 -229 1981 141 0 10 chr17 20647947 20648260 -64790220 - AluJb SINE Alu 0 312 3 1814 173 86 45 chr17 20648260 20648449 -64790031 + MLT1D LTR MaLR 276 456 -49 364 241 75 23 chr17 20648578 20648711 -64789769 + MIR SINE MIR 46 185 -77 253 170 73 4 chr17 20649179 20649249 -64789231 + MLT1D LTR MaLR 356 456 -39 576 180 0 2 chr17 20649324 20649433 -64789047 - MIR SINE MIR -56 152 45 213 153 153 0 chr17 20650659 20650718 -64787762 + L2 LINE L2 2985 3052 -220 565 273 164 9 chr17 20650734 20650954 -64787526 - MIR SINE MIR 0 262 9 376 184 26 0 chr17 20651776 20651852 -64786628 - MIR SINE MIR -63 145 68 1250 288 149 15 chr17 20652636 20652717 -64785763 + L1ME3 LINE L1 5491 5560 -602 1868 164 0 16 chr17 20652717 20653034 -64785446 + AluJb SINE Alu 1 312 0 1250 288 149 15 chr17 20653034 20653495 -64784985 + L1ME3 LINE L1 5560 6121 -41 1575 178 7 10 chr17 20653495 20653813 -64784667 + AluJo SINE Alu 1 312 0 1250 288 149 15 chr17 20653813 20653859 -64784621 + L1ME3 LINE L1 6121 6159 -3 928 283 127 36 chr17 20654303 20655117 -64783363 + L1MD1 LINE L1 5446 5996 -246 2593 175 52 25 chr17 20654357 20654716 -64783764 + L1MB3 LINE L1 5534 5915 -268 2301 107 0 0 chr17 20654716 20655026 -64783454 + AluSx SINE Alu 1 310 -2 2593 175 52 25 chr17 20655026 20655227 -64783253 + L1MB3 LINE L1 5915 6109 -74 1201 258 102 17 chr17 20655227 20655580 -64782900 - MLT1G3 LTR MaLR -212 383 1 200 323 94 0 chr17 20655589 20655685 -64782795 - L2 LINE L2 -36 3236 3132 2151 97 3 3 chr17 20655724 20656024 -64782456 - AluSx SINE Alu -12 300 1 702 286 68 5 chr17 20656055 20656261 -64782219 - MIR SINE MIR -30 232 14 517 332 45 9 chr17 20656657 20656877 -64781603 + MIR SINE MIR 20 247 -15 419 305 108 15 chr17 20656898 20657101 -64781379 - L3 LINE CR1 -471 1106 885 232 365 43 0 chr17 20657725 20657840 -64780640 - MIR SINE MIR -44 218 99 1102 158 49 0 chr17 20657864 20658067 -64780413 + L1MB3 LINE L1 5970 6182 -1 391 243 27 74 chr17 20658277 20658365 -64780115 + MER113 DNA MER1_type? 233 324 -197 1002 205 0 6 chr17 20658365 20658536 -64779944 + FAM SINE Alu 2 171 -4 2011 112 39 0 chr17 20658539 20658824 -64779656 + AluSg SINE Alu 1 296 -14 391 243 27 74 chr17 20658824 20658879 -64779601 + MER113 DNA MER1_type? 326 373 -148 230 0 0 32 chr17 20658887 20658918 -64779562 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 813 130 0 0 chr17 20658922 20659037 -64779443 - FLAM_C SINE Alu -18 115 1 431 202 53 0 chr17 20659038 20659132 -64779348 + MER113 DNA MER1_type? 361 459 -62 396 316 71 0 chr17 20659571 20659726 -64778754 + Charlie8 DNA MER1_type 1 166 -2251 1929 116 11 0 chr17 20659734 20660040 -64778440 + AluSq SINE Alu 9 317 0 22 35 0 0 chr17 20660058 20660087 -64778393 + AT_rich Low_complexity Low_complexity 1 29 0 2075 106 3 10 chr17 20660143 20660446 -64778034 - AluSq SINE Alu -12 301 1 850 202 35 6 chr17 20661006 20661179 -64777301 + MER45A DNA AcHobo 1 178 0 352 292 45 45 chr17 20661614 20661768 -64776712 - MIR SINE MIR -5 257 104 840 273 206 5 chr17 20661772 20662179 -64776301 + L2 LINE L2 2053 2541 -773 2273 146 28 0 chr17 20662197 20662553 -64775927 - MER47A DNA MER2_type 0 366 1 392 137 0 0 chr17 20662586 20662659 -64775821 + L1M4 LINE L1 5128 5200 -946 1950 154 0 3 chr17 20662661 20662973 -64775507 + AluSx SINE Alu 1 311 -1 581 285 109 18 chr17 20662973 20663257 -64775223 - L2 LINE L2 -857 2457 2148 195 42 0 0 chr17 20663323 20663347 -64775133 + (TCTCC)n Simple_repeat Simple_repeat 2 25 0 1721 178 10 0 chr17 20663347 20663712 -64774768 - AluJb SINE Alu -4 400 7 201 268 37 0 chr17 20663797 20663879 -64774601 - L2 LINE L2 -1189 2125 2041 231 36 0 0 chr17 20664495 20664523 -64773957 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 1543 158 7 58 chr17 20664528 20664820 -64773660 - AluSx SINE Alu -35 277 1 189 121 0 0 chr17 20666693 20666726 -64771754 + (CAT)n Simple_repeat Simple_repeat 2 34 0 190 225 25 0 chr17 20668266 20668346 -64770134 + (CTTA)n Simple_repeat Simple_repeat 2 83 0 431 128 0 26 chr17 20670124 20670202 -64768278 - L1MD1 LINE L1 -4 6238 6163 903 168 12 6 chr17 20670202 20670363 -64768117 + FRAM SINE Alu 10 171 -5 1338 171 101 0 chr17 20670382 20670668 -64767812 + Tigger1 DNA MER2_type 1 315 -2103 651 138 0 0 chr17 20670669 20670763 -64767717 - AluJb SINE Alu -13 299 206 6193 133 21 4 chr17 20670765 20671770 -64766710 + Tigger1 DNA MER2_type 1006 2027 -391 1966 131 6 3 chr17 20672049 20672361 -64766119 - AluSq SINE Alu 0 313 1 1805 129 3 41 chr17 20672556 20672836 -64765644 + AluSx SINE Alu 1 269 -43 2437 46 3 3 chr17 20672836 20673138 -64765342 - AluY SINE Alu -9 302 1 1805 129 3 41 chr17 20673138 20673175 -64765305 + AluSx SINE Alu 269 306 -6 1969 118 6 34 chr17 20673184 20673323 -64765157 + AluSx SINE Alu 1 142 -170 2263 75 13 0 chr17 20673323 20673630 -64764850 + AluY SINE Alu 1 311 0 1969 118 6 34 chr17 20673630 20673811 -64764669 + AluSx SINE Alu 142 312 0 216 333 16 0 chr17 20673970 20674033 -64764447 + MIR SINE MIR 14 77 -185 190 214 145 99 chr17 20674036 20674167 -64764313 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20675236 20675264 -64763216 + AT_rich Low_complexity Low_complexity 1 28 0 202 229 145 99 chr17 20675563 20675694 -64762786 - MIR SINE MIR -82 180 44 193 250 23 0 chr17 20675697 20675741 -64762739 - MIR SINE MIR -185 77 33 340 261 126 8 chr17 20676313 20676432 -64762048 + MIR SINE MIR 7 139 -123 536 279 142 60 chr17 20676445 20676811 -64761669 - L2 LINE L2 -20 3252 2857 508 298 53 27 chr17 20677069 20677219 -64761261 + MIR3 SINE MIR 33 185 -42 393 272 31 63 chr17 20678713 20678904 -64759576 + MIR SINE MIR 28 212 -50 4719 263 100 38 chr17 20680628 20680918 -64757562 + HAL1 LINE L1 64 335 -2172 2319 80 0 3 chr17 20680918 20681219 -64757261 + AluY SINE Alu 1 300 -11 4719 263 100 38 chr17 20681219 20681888 -64756592 + HAL1 LINE L1 335 962 -1545 1877 166 0 0 chr17 20681888 20682184 -64756296 - AluJb SINE Alu -16 296 1 4719 263 100 38 chr17 20682184 20683410 -64755070 + HAL1 LINE L1 962 2384 -123 3648 59 0 0 chr17 20683475 20683919 -64754561 + L1PA6 LINE L1 5711 6154 0 2261 84 0 10 chr17 20683924 20684220 -64754260 + AluY SINE Alu 1 293 -18 27 0 0 0 chr17 20684246 20684273 -64754207 + AT_rich Low_complexity Low_complexity 1 27 0 450 298 13 20 chr17 20684862 20685034 -64753446 + MIR SINE MIR 3 174 -88 320 276 118 7 chr17 20688721 20688873 -64749607 + MIR3 SINE MIR 33 201 -7 396 268 39 0 chr17 20688952 20689079 -64749401 + MIR SINE MIR 20 151 -111 213 349 73 0 chr17 20689598 20689707 -64748773 - MIR SINE MIR -95 167 51 291 208 38 85 chr17 20689779 20689885 -64748595 - MIR SINE MIR -64 144 44 5650 128 26 25 chr17 20690319 20691256 -64747224 - LTR5 LTR ERVK 0 969 32 436 258 65 0 chr17 20692669 20692793 -64745687 + MIR SINE MIR 88 219 -43 301 274 108 38 chr17 20692818 20693004 -64745476 - L2 LINE L2 -12 3301 3103 182 326 22 56 chr17 20694441 20694530 -64743950 + MIR SINE MIR 61 146 -62 224 250 48 77 chr17 20695814 20695918 -64742562 - MIR SINE MIR -60 148 48 277 314 43 31 chr17 20704176 20704434 -64734046 + L2 LINE L2 2498 2758 -556 294 303 110 0 chr17 20705648 20705757 -64732723 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 20706088 20706112 -64732368 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 347 309 88 0 chr17 20706720 20706856 -64731624 + MIR SINE MIR 81 228 -34 2135 160 35 2 chr17 20707818 20708218 -64730262 + L1PB4 LINE L1 5539 5951 -205 1405 43 0 134 chr17 20708218 20708450 -64730030 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 20708517 20708592 -64729888 - MIR SINE MIR -133 129 56 510 294 76 0 chr17 20708642 20708826 -64729654 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 20708853 20708933 -64729547 - MER3 DNA MER1_type -5 204 125 2354 77 3 3 chr17 20708934 20709244 -64729236 + AluY SINE Alu 1 310 -1 216 333 16 0 chr17 20709341 20709404 -64729076 + MIR SINE MIR 14 77 -185 223 221 145 99 chr17 20709407 20709538 -64728942 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20709837 20709865 -64728615 + AT_rich Low_complexity Low_complexity 1 28 0 183 214 145 99 chr17 20710935 20711066 -64727414 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 20711069 20711132 -64727348 - MIR SINE MIR -185 77 14 2004 142 3 0 chr17 20711287 20711598 -64726882 - AluSx SINE Alu 0 312 1 1739 218 30 28 chr17 20711598 20711662 -64726818 - MLT1C-int LTR MaLR -752 619 557 1499 167 37 27 chr17 20711662 20711956 -64726524 - AluSx SINE Alu -15 297 1 1739 218 30 28 chr17 20711956 20712326 -64726154 - MLT1C-int LTR MaLR -814 557 184 1965 145 10 0 chr17 20712575 20712878 -64725602 + AluSq SINE Alu 1 306 -7 232 359 33 0 chr17 20713010 20713102 -64725378 + L2 LINE L2 3192 3286 -27 1205 241 87 34 chr17 20713738 20714174 -64724306 - MLT1C LTR MaLR 0 467 9 2082 63 4 7 chr17 20714599 20714896 -64723584 + AluY SINE Alu 17 312 0 2154 92 3 0 chr17 20715344 20715639 -64722841 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 20715658 20715816 -64722664 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 20715872 20715923 -64722557 + (CGG)n Simple_repeat Simple_repeat 2 52 0 243 365 14 7 chr17 20716294 20716442 -64722038 + G-rich Low_complexity Low_complexity 2 150 0 296 285 38 13 chr17 20716467 20716723 -64721757 + GA-rich Low_complexity Low_complexity 1 262 0 450 309 11 28 chr17 20716971 20717152 -64721328 + G-rich Low_complexity Low_complexity 3 180 0 402 317 0 38 chr17 20717204 20717390 -64721090 + G-rich Low_complexity Low_complexity 2 180 0 805 203 6 0 chr17 20718348 20718506 -64719974 + AluJb SINE Alu 1 159 -153 2155 76 45 0 chr17 20720167 20720455 -64718025 - AluY SINE Alu -10 301 1 402 68 17 0 chr17 20721518 20721577 -64716903 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 20722030 20722329 -64716151 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 20722349 20722373 -64716107 + AT_rich Low_complexity Low_complexity 1 24 0 383 327 45 71 chr17 20722822 20723059 -64715421 + HAL1 LINE L1 904 1135 -1372 1848 89 4 0 chr17 20723059 20723307 -64715173 + AluY SINE Alu 1 249 -62 383 327 45 71 chr17 20723307 20723335 -64715145 + HAL1 LINE L1 1135 1162 -1345 219 381 77 5 chr17 20723343 20723537 -64714943 + L2 LINE L2 2542 2749 -565 3471 112 27 24 chr17 20723551 20724300 -64714180 - L1PA13 LINE L1 0 6154 5384 411 273 13 67 chr17 20724560 20724792 -64713688 + LTR41 LTR ERVL 469 712 -61 935 83 91 224 chr17 20724792 20724878 -64713602 - MER30 DNA MER1_type -1 229 133 1879 130 7 13 chr17 20724878 20725177 -64713303 + AluSx SINE Alu 1 297 -15 1981 115 27 14 chr17 20725179 20725474 -64713006 + AluSc SINE Alu 1 299 -10 935 83 91 224 chr17 20725474 20725648 -64712832 - MER30 DNA MER1_type -98 132 1 411 273 13 67 chr17 20725648 20725739 -64712741 + LTR41 LTR ERVL 712 761 -12 230 335 185 28 chr17 20725750 20726208 -64712272 + L2 LINE L2 2787 3312 -1 520 293 60 24 chr17 20726262 20726511 -64711969 + MIR SINE MIR 2 259 -3 1376 293 39 21 chr17 20730488 20731154 -64707326 - L1MC3 LINE L1 -1629 6156 5479 203 349 28 46 chr17 20735878 20735987 -64702493 + MIR SINE MIR 82 188 -74 1444 176 111 29 chr17 20736381 20736722 -64701758 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 20737270 20737295 -64701185 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 204 163 0 0 chr17 20737782 20737825 -64700655 + C-rich Low_complexity Low_complexity 4 46 0 246 273 0 34 chr17 20738124 20738212 -64700268 + GA-rich Low_complexity Low_complexity 6 90 0 683 292 36 24 chr17 20738267 20738517 -64699963 + MER89-int LTR ERV1 1407 1659 -5142 296 266 93 29 chr17 20739941 20740080 -64698400 + L1MEc LINE L1 1910 2057 -4339 291 54 0 0 chr17 20740108 20740145 -64698335 + (TA)n Simple_repeat Simple_repeat 2 38 0 1479 189 3 14 chr17 20740160 20740445 -64698035 - AluJb SINE Alu -30 282 1 882 241 13 47 chr17 20740500 20740732 -64697748 + MER58A DNA MER1_type 1 224 0 415 278 95 18 chr17 20740734 20740903 -64697577 - L2 LINE L2 -653 2661 2480 2364 73 0 16 chr17 20740974 20741289 -64697191 + AluY SINE Alu 1 310 -1 1785 157 29 76 chr17 20741751 20742160 -64696320 + MLT1B LTR MaLR 1 390 0 296 209 12 31 chr17 20743090 20743253 -64695227 + CT-rich Low_complexity Low_complexity 2 161 0 1877 144 0 13 chr17 20743425 20743723 -64694757 - AluJb SINE Alu -16 296 3 1629 133 133 15 chr17 20743724 20743988 -64694492 - AluJo SINE Alu -7 295 1 422 241 76 21 chr17 20743989 20744134 -64694346 - MER106A DNA MER1_type -79 157 5 2099 107 0 0 chr17 20744185 20744475 -64694005 - AluSx SINE Alu -15 297 8 238 211 13 40 chr17 20744712 20744788 -64693692 + (CCCCG)n Simple_repeat Simple_repeat 1 74 0 232 239 87 76 chr17 20746116 20746300 -64692180 + L2 LINE L2 2870 3055 -217 828 283 36 12 chr17 20748163 20748410 -64690070 + MIR SINE MIR 9 261 -1 491 283 51 0 chr17 20748397 20748535 -64689945 + L2 LINE L2 3169 3313 0 * 1827 151 0 13 chr17 20749079 20749377 -64689103 - AluJb SINE Alu -16 296 3 1400 150 135 22 chr17 20749378 20749645 -64688835 - AluJo SINE Alu -15 297 1 2229 97 0 0 chr17 20750927 20751225 -64687255 - AluSx SINE Alu -14 298 1 2274 103 0 0 chr17 20752167 20752477 -64686003 - AluSx SINE Alu -2 310 1 1342 181 46 46 chr17 20752545 20752871 -64685609 + MLT1D LTR MaLR 180 505 0 1826 107 38 0 chr17 20753139 20753400 -64685080 - AluSx SINE Alu -9 303 33 1011 76 8 0 chr17 20753400 20753531 -64684949 - AluSq/x SINE Alu -181 132 1 1399 202 4 4 chr17 20753550 20753807 -64684673 + AluJo SINE Alu 43 299 -13 1880 222 30 14 chr17 20753816 20754249 -64684231 - MLT1D LTR MaLR -53 452 13 242 108 27 0 chr17 20754251 20754288 -64684192 - MLT1D LTR MaLR -467 38 1 2562 58 0 0 chr17 20754345 20754656 -64683824 - AluY SINE Alu 0 311 1 953 118 0 7 chr17 20754656 20754792 -64683688 - AluSq/x SINE Alu -177 135 1 1829 136 25 0 chr17 20754792 20755078 -64683402 - AluSq SINE Alu -9 304 12 2061 132 3 0 chr17 20755098 20755394 -64683086 - AluSq SINE Alu -10 303 7 307 276 92 43 chr17 20755410 20755595 -64682885 + MLT1K LTR MaLR 349 542 -46 729 297 52 0 chr17 20755617 20755849 -64682631 - MIR SINE MIR -11 251 8 623 274 18 50 chr17 20755858 20755923 -64682557 - LTR16C LTR ERVL -10 481 415 2124 120 10 0 chr17 20755923 20756224 -64682256 - AluSx SINE Alu 0 312 9 623 274 18 50 chr17 20756224 20756377 -64682103 - LTR16C LTR ERVL -76 415 270 743 222 149 0 chr17 20756596 20756790 -64681690 - MLT1G3 LTR MaLR -230 300 78 257 204 0 20 chr17 20756790 20756839 -64681641 + polypyrimidine Low_complexity Low_complexity 1 48 0 2158 129 0 0 chr17 20756839 20757148 -64681332 - AluSg SINE Alu -1 309 1 501 206 28 0 chr17 20757149 20757290 -64681190 + CT-rich Low_complexity Low_complexity 2 146 0 659 196 22 73 chr17 20757308 20757487 -64680993 + L1 LINE L1 4821 4990 -1156 1623 180 27 13 chr17 20757508 20757808 -64680672 - AluJb SINE Alu -8 304 1 2109 126 0 7 chr17 20757820 20758130 -64680350 - AluSx SINE Alu 0 312 5 225 279 59 0 chr17 20758159 20758227 -64680253 - MLT1H LTR MaLR -408 141 70 357 235 17 59 chr17 20758231 20758350 -64680130 + MLT1J LTR MaLR 388 501 -10 2095 78 7 11 chr17 20758587 20758893 -64679587 + AluSg SINE Alu 1 305 0 800 150 7 43 chr17 20759103 20759243 -64679237 + AluJo SINE Alu 1 135 -177 1764 176 3 22 chr17 20759243 20759556 -64678924 + AluJo SINE Alu 1 307 -5 909 246 55 123 chr17 20759581 20759729 -64678751 + L1MEc LINE L1 2152 2309 -3906 2332 91 0 0 chr17 20759729 20760038 -64678442 + AluY SINE Alu 1 309 -2 909 246 55 123 chr17 20760038 20760248 -64678232 + L1MEc LINE L1 2309 2402 -3813 1799 143 14 0 chr17 20760248 20760528 -64677952 + AluSx SINE Alu 29 312 0 909 246 55 123 chr17 20760528 20760853 -64677627 + L1MEc LINE L1 2402 2748 -3467 785 197 0 7 chr17 20760890 20761032 -64677448 - AluJo SINE Alu -52 260 120 815 151 14 43 chr17 20761075 20761214 -64677266 - AluJo SINE Alu -176 136 2 2364 85 0 0 chr17 20761233 20761538 -64676942 + AluSc SINE Alu 1 305 -4 1849 125 12 60 chr17 20761552 20761871 -64676609 + AluSx SINE Alu 1 304 -8 417 270 133 0 chr17 20761877 20762006 -64676474 + L1MC/D LINE L1 5488 5634 -522 2074 132 0 0 chr17 20762026 20762322 -64676158 + AluSx SINE Alu 1 296 -16 1989 126 0 40 chr17 20762324 20762469 -64676011 + AluSx SINE Alu 1 150 -162 2313 73 3 0 chr17 20762469 20762772 -64675708 + AluY SINE Alu 1 304 -7 1989 126 0 40 chr17 20762772 20762951 -64675529 + AluSx SINE Alu 150 312 0 2132 101 0 10 chr17 20762973 20763108 -64675372 + AluSx SINE Alu 1 136 -176 2249 88 0 0 chr17 20763108 20763404 -64675076 + AluY SINE Alu 1 296 -15 2132 101 0 10 chr17 20763404 20763566 -64674914 + AluSx SINE Alu 136 295 -17 1811 149 16 13 chr17 20763569 20763878 -64674602 - AluJb SINE Alu 0 312 3 681 124 0 0 chr17 20764025 20764130 -64674350 - AluSg/x SINE Alu -3 307 203 347 139 4 2 chr17 20764143 20764212 -64674268 + Alu SINE Alu 244 302 0 342 271 200 21 chr17 20765135 20765275 -64673205 - MIR SINE MIR -80 182 18 2188 114 0 9 chr17 20765549 20765864 -64672616 + AluSx SINE Alu 1 312 0 258 247 234 0 chr17 20765985 20766062 -64672418 + MIR SINE MIR 52 146 -116 1566 164 13 7 chr17 20766367 20766666 -64671814 - AluY SINE Alu -10 301 1 2187 106 0 13 chr17 20766669 20766844 -64671636 - AluSx SINE Alu -5 307 136 2056 112 23 3 chr17 20766844 20767149 -64671331 - AluSx SINE Alu -1 311 1 2187 106 0 13 chr17 20767149 20767284 -64671196 - AluSx SINE Alu -176 136 1 346 204 11 11 chr17 20767287 20767375 -64671105 - FLAM_A SINE Alu 0 133 46 261 233 159 91 chr17 20767383 20767559 -64670921 + L2 LINE L2 2886 3073 -240 1827 156 0 9 chr17 20767582 20767897 -64670583 - AluJb SINE Alu 0 312 1 1139 196 115 63 chr17 20767762 20767904 -64670576 - AluJo SINE Alu -1 301 168 2118 113 0 3 chr17 20767904 20768206 -64670274 - AluSx SINE Alu -11 301 1 2045 133 0 0 chr17 20768212 20768506 -64669974 - AluSc SINE Alu -15 294 1 1556 157 88 7 chr17 20768506 20768780 -64669700 - AluSx SINE Alu -16 296 1 1139 196 115 63 chr17 20768780 20768915 -64669565 - AluJo SINE Alu -137 165 1 1929 113 57 0 chr17 20768916 20769198 -64669282 - AluSg SINE Alu -12 298 1 1817 154 0 4 chr17 20769272 20769552 -64668928 - AluJb SINE Alu -33 279 1 2097 103 7 0 chr17 20769671 20769962 -64668518 - AluSc SINE Alu -16 293 1 1852 73 114 15 chr17 20769978 20770251 -64668229 + AluY SINE Alu 1 300 -11 594 161 331 0 chr17 20770261 20770391 -64668089 - AluJo SINE Alu -138 174 2 2198 107 0 3 chr17 20770805 20771114 -64667366 - AluSc SINE Alu -1 308 1 1968 107 38 3 chr17 20771481 20771770 -64666710 + AluSx SINE Alu 1 299 -13 1766 117 53 0 chr17 20771776 20772073 -64666407 + AluY SINE Alu 5 315 0 1245 113 0 5 chr17 20772544 20772723 -64665757 - AluSq SINE Alu -1 312 134 2474 59 0 3 chr17 20772723 20773026 -64665454 - AluY SINE Alu -9 302 1 2390 65 0 37 chr17 20773033 20773356 -64665124 - AluY SINE Alu 0 311 1 2149 102 0 13 chr17 20773499 20773668 -64664812 - AluSq SINE Alu -12 301 136 2363 71 3 7 chr17 20773668 20773978 -64664502 - AluSp SINE Alu -4 309 1 2149 102 0 13 chr17 20773978 20774113 -64664367 - AluSq SINE Alu -177 136 1 216 123 18 35 chr17 20775184 20775241 -64663239 + CT-rich Low_complexity Low_complexity 1 56 0 1639 160 33 26 chr17 20775270 20775576 -64662904 - AluJb SINE Alu -4 308 1 2353 50 7 3 chr17 20775668 20775966 -64662514 + AluY SINE Alu 1 299 -12 1612 175 7 17 chr17 20775969 20776266 -64662214 + AluJo SINE Alu 1 294 -18 2035 100 0 55 chr17 20776326 20776637 -64661843 - AluSc SINE Alu -15 294 1 2224 83 6 19 chr17 20776668 20776980 -64661500 + AluY SINE Alu 1 308 -3 25 31 0 0 chr17 20777000 20777032 -64661448 + AT_rich Low_complexity Low_complexity 1 32 0 2302 93 0 0 chr17 20777081 20777382 -64661098 + AluSx SINE Alu 1 301 -11 1490 188 33 0 chr17 20777479 20777750 -64660730 - AluJo SINE Alu -32 280 1 2343 39 0 11 chr17 20777750 20778067 -64660413 - AluY SINE Alu 0 314 1 2217 108 3 0 chr17 20778069 20778375 -64660105 - AluSp SINE Alu -6 307 1 1471 213 3 3 chr17 20778382 20778669 -64659811 - AluJo SINE Alu -17 295 9 2253 76 0 0 chr17 20778685 20778976 -64659504 - AluSx SINE Alu -21 291 1 764 134 7 42 chr17 20778976 20779118 -64659362 - L1MB2 LINE L1 -220 5951 5815 1745 148 43 13 chr17 20779118 20779421 -64659059 - AluJo SINE Alu 0 312 1 2254 79 3 10 chr17 20779894 20780198 -64658282 + AluSp SINE Alu 1 302 -11 1681 184 29 9 chr17 20781162 20781504 -64656976 + MER47A DNA MER2_type 18 366 0 499 260 92 23 chr17 20781958 20782131 -64656349 - Zaphod DNA AcHobo -2146 1885 1701 2004 137 0 3 chr17 20782131 20782438 -64656042 + AluSq SINE Alu 1 306 -7 992 87 0 0 chr17 20782438 20782565 -64655915 + AluSg SINE Alu 1 127 -183 2087 110 3 0 chr17 20782566 20782856 -64655624 + AluSx SINE Alu 11 301 -11 198 0 0 0 chr17 20783514 20783536 -64654944 + (T)n Simple_repeat Simple_repeat 1 22 0 838 152 0 8 chr17 20783595 20783727 -64654753 - FLAM_C SINE Alu 0 133 3 2011 135 0 0 chr17 20784173 20784476 -64654004 - AluJb SINE Alu -9 303 1 2132 121 3 0 chr17 20784482 20784787 -64653693 - AluSq SINE Alu -7 306 1 2177 144 30 62 chr17 20784900 20785135 -64653345 - L1MA7 LINE L1 0 6291 6050 198 0 0 0 chr17 20785135 20785157 -64653323 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2225 104 0 0 chr17 20785160 20785459 -64653021 - AluSx SINE Alu -12 300 2 2177 144 30 62 chr17 20785459 20785500 -64652980 - L1MA7 LINE L1 -243 6048 6007 1969 122 10 0 chr17 20785500 20785788 -64652692 + AluJb SINE Alu 1 291 -21 2177 144 30 62 chr17 20785788 20786088 -64652392 - L1MA7 LINE L1 -284 6007 5621 441 310 111 18 chr17 20786091 20786317 -64652163 - L1M4 LINE L1 -1155 4991 4745 357 271 85 20 chr17 20786395 20786439 -64652041 - L1M4 LINE L1 -1768 4378 4338 2392 70 0 25 chr17 20786439 20786755 -64651725 - AluY SINE Alu -3 308 1 357 271 85 20 chr17 20786755 20786980 -64651500 - L1M4 LINE L1 -1808 4338 4072 2328 97 0 0 chr17 20788254 20788564 -64649916 + AluY SINE Alu 1 310 -1 10104 39 15 105 chr17 20789047 20790570 -64647910 - SVA Other Other 0 1386 1 852 226 34 34 chr17 20790811 20791045 -64647435 + MIR SINE MIR 28 261 -1 1653 159 0 4 chr17 20791157 20791428 -64647052 - AluJb SINE Alu -19 293 24 2031 138 0 0 chr17 20791433 20791730 -64646750 - AluSq SINE Alu -16 297 1 2410 79 0 0 chr17 20791814 20792117 -64646363 - AluSg SINE Alu -7 303 1 198 323 83 10 chr17 20793422 20793518 -64644962 - L3 LINE CR1 -453 1124 1022 1786 144 0 50 chr17 20793725 20793872 -64644608 + AluJb SINE Alu 1 125 -187 2156 95 0 10 chr17 20793872 20794167 -64644313 + AluSx SINE Alu 1 292 -20 1786 144 0 50 chr17 20794167 20794338 -64644142 + AluJb SINE Alu 125 303 -9 2121 120 3 13 chr17 20794345 20794661 -64643819 + AluSq SINE Alu 1 313 0 272 267 68 48 chr17 20795480 20795626 -64642854 + MER91B DNA MER1_type 37 185 -5 1902 98 29 138 chr17 20795962 20796340 -64642140 + MER1B DNA MER1_type 1 337 0 367 290 91 45 chr17 20796603 20796779 -64641701 - MIR SINE MIR -33 229 46 2149 116 0 0 chr17 20797678 20797972 -64640508 + AluSx SINE Alu 1 294 -18 1711 127 81 3 chr17 20797975 20798258 -64640222 + AluSc SINE Alu 1 305 -4 2254 71 3 10 chr17 20802039 20802336 -64636144 - AluSq SINE Alu -18 295 1 2315 95 0 0 chr17 20805803 20806107 -64632373 + AluY SINE Alu 1 304 -7 380 190 134 145 chr17 20806183 20806268 -64632212 + MIR SINE MIR 65 149 -113 1627 172 29 0 chr17 20806268 20806547 -64631933 - AluJo SINE Alu -16 296 10 380 190 134 145 chr17 20806547 20806640 -64631840 + MIR SINE MIR 149 241 -21 184 280 40 90 chr17 20806693 20806793 -64631687 + L2 LINE L2 3169 3263 -50 200 344 62 31 chr17 20807008 20807168 -64631312 - L2 LINE L2 -8 3264 3100 295 227 52 31 chr17 20807900 20807997 -64630483 - MIR SINE MIR -126 136 38 1710 154 42 0 chr17 20808120 20808405 -64630075 + AluSg SINE Alu 14 310 0 184 246 109 80 chr17 20808627 20808765 -64629715 - L3 LINE CR1 -109 1468 1327 256 308 0 13 chr17 20809332 20809410 -64629070 + MER5B DNA MER1_type 64 140 -38 2248 104 0 0 chr17 20809410 20809718 -64628762 + AluSq SINE Alu 1 308 -5 399 256 44 29 chr17 20809756 20809893 -64628587 - MIR3 SINE MIR -33 175 37 189 264 19 0 chr17 20813622 20813675 -64624805 + L2 LINE L2 2586 2639 -675 2070 109 26 3 chr17 20814975 20815279 -64623201 - AluSq SINE Alu -2 311 1 389 283 68 61 chr17 20816233 20816512 -64621968 + L2 LINE L2 3017 3297 -16 2000 127 0 0 chr17 20816520 20816811 -64621669 + AluSx SINE Alu 1 291 -21 2376 81 0 0 chr17 20816814 20817112 -64621368 + AluY SINE Alu 1 298 -13 2907 162 34 68 chr17 20817328 20817660 -64620820 - L1MB5 LINE L1 -13 6161 5819 2172 107 0 10 chr17 20817660 20817969 -64620511 - AluSg SINE Alu -4 306 1 2907 162 34 68 chr17 20817969 20818105 -64620375 - L1MB5 LINE L1 -355 5819 5680 2435 60 0 3 chr17 20818105 20818407 -64620073 + AluY SINE Alu 2 302 -9 2907 162 34 68 chr17 20818407 20818447 -64620033 - L1MB5 LINE L1 -494 5680 5640 1875 114 7 4 chr17 20818447 20818719 -64619761 - AluSx SINE Alu -5 307 35 2907 162 34 68 chr17 20818719 20819050 -64619430 - L1MB5 LINE L1 -534 5640 5343 263 266 0 0 chr17 20819047 20819111 -64619369 - L1MB5 LINE L1 -1025 5121 5058 * 2180 103 0 28 chr17 20819863 20820182 -64618298 - AluSx SINE Alu 0 312 3 1663 165 24 0 chr17 20820182 20820473 -64618007 - AluSx SINE Alu -9 303 6 2106 106 0 0 chr17 20820479 20820795 -64617685 - AluY SINE Alu 0 317 2 1438 170 24 34 chr17 20821447 20821741 -64616739 + AluJb SINE Alu 1 291 -21 2046 127 3 0 chr17 20821872 20822193 -64616287 - AluSq SINE Alu 0 313 1 2292 64 0 0 chr17 20822246 20822556 -64615924 - AluY SINE Alu 0 310 1 207 182 0 0 chr17 20822599 20822632 -64615848 + (CGTG)n Simple_repeat Simple_repeat 1 33 0 350 346 25 31 chr17 20823109 20823271 -64615209 + MIR SINE MIR 59 219 -43 180 0 0 0 chr17 20823344 20823364 -64615116 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2186 96 7 0 chr17 20823844 20824135 -64614345 + AluSx SINE Alu 1 293 -19 3631 178 43 54 chr17 20824179 20825145 -64613335 - LTR5 LTR ERVK -13 956 1 196 284 91 34 chr17 20826522 20826610 -64611870 - MIR3 SINE MIR -11 197 105 209 274 42 42 chr17 20826796 20826891 -64611589 - MIR3 SINE MIR -106 102 8 363 265 130 25 chr17 20827050 20827212 -64611268 - MIR SINE MIR -21 241 63 1232 188 9 0 chr17 20827338 20827561 -64610919 + AluJb SINE Alu 84 308 -4 2100 124 7 0 chr17 20827686 20827992 -64610488 - AluSc SINE Alu 0 309 2 465 172 0 43 chr17 20828067 20828160 -64610320 + FLAM_A SINE Alu 53 141 -1 1218 192 0 22 chr17 20828736 20828965 -64609515 - AluJo SINE Alu -88 224 1 23 0 0 0 chr17 20828978 20829001 -64609479 + AT_rich Low_complexity Low_complexity 1 23 0 7074 64 24 19 chr17 20829038 20830687 -64607793 - SVA Other Other -683 1386 5 2106 93 4 0 chr17 20830687 20830965 -64607515 - AluSp SINE Alu -34 279 1 2175 89 0 0 chr17 20831504 20831809 -64606671 - AluSc SINE Alu 0 305 1 2281 71 3 3 chr17 20832043 20832338 -64606142 + AluY SINE Alu 1 295 -16 2048 103 17 0 chr17 20832350 20832641 -64605839 + AluSq SINE Alu 1 296 -17 2055 104 21 0 chr17 20832661 20832948 -64605532 + AluSx SINE Alu 1 293 -19 705 157 0 0 chr17 20832960 20833062 -64605418 + FLAM_C SINE Alu 2 103 -40 2215 114 0 0 chr17 20833480 20833788 -64604692 + AluSc SINE Alu 1 308 -1 450 207 63 0 chr17 20834072 20834183 -64604297 + MER33 DNA MER1_type 34 151 -173 2201 86 0 0 chr17 20834214 20834493 -64603987 + AluSg SINE Alu 2 280 -30 1643 191 7 3 chr17 20834521 20834825 -64603655 + AluJb SINE Alu 1 305 -7 306 183 0 33 chr17 20836074 20836096 -64602384 - L1ME4a LINE L1 -2 6119 6098 2079 120 3 0 chr17 20836096 20836387 -64602093 + AluSc SINE Alu 1 292 -17 306 183 0 33 chr17 20836387 20836424 -64602056 - L1ME4a LINE L1 -23 6098 6062 267 301 166 16 chr17 20836453 20836646 -64601834 - L1ME LINE L1 -314 5807 5586 421 249 195 32 chr17 20837569 20837790 -64600690 - MIR SINE MIR -5 257 1 231 244 191 9 chr17 20837898 20838013 -64600467 + Charlie8 DNA MER1_type 86 221 -2196 789 174 0 0 chr17 20838415 20838530 -64599950 + AluJo/FLAM SINE Alu 1 115 -187 453 139 0 15 chr17 20838531 20838784 -64599696 + AluSq SINE Alu 2 317 0 2124 106 0 7 chr17 20838793 20839085 -64599395 + AluSx SINE Alu 1 290 -22 289 188 130 0 chr17 20839103 20839172 -64599308 + AluSp SINE Alu 149 226 -77 35 33 0 17 chr17 20839628 20839666 -64598814 + AT_rich Low_complexity Low_complexity 1 39 -20 1900 134 31 0 chr17 20839666 20839956 -64598524 + AluSg SINE Alu 1 299 -11 35 33 0 17 chr17 20839956 20839977 -64598503 + AT_rich Low_complexity Low_complexity 39 59 0 374 194 126 10 chr17 20839977 20840080 -64598400 - L1MB8 LINE L1 -1 6177 6063 2100 102 6 19 chr17 20840081 20840395 -64598085 - AluSq SINE Alu -3 310 1 1210 178 87 73 chr17 20840405 20840554 -64597926 - AluJo SINE Alu -12 290 134 2103 116 26 0 chr17 20840554 20840856 -64597624 - AluSx SINE Alu -2 310 1 1210 178 87 73 chr17 20840856 20840992 -64597488 - AluJo SINE Alu -168 134 1 1585 190 33 2 chr17 20841012 20841024 -64597456 - L1MB8 LINE L1 -430 5754 5744 1668 106 0 0 chr17 20841024 20841250 -64597230 + AluSq SINE Alu 1 226 -87 1585 190 33 2 chr17 20841250 20841561 -64596919 - L1MB8 LINE L1 -440 5744 5428 1871 121 6 46 chr17 20841561 20841884 -64596596 - AluY SINE Alu -1 310 1 1585 190 33 2 chr17 20841884 20841905 -64596575 - L1MB8 LINE L1 -756 5428 5409 1607 115 7 33 chr17 20842011 20842102 -64596378 + AluSx SINE Alu 49 141 -171 2362 64 3 10 chr17 20842102 20842415 -64596065 + AluY SINE Alu 1 311 0 1607 115 7 33 chr17 20842415 20842593 -64595887 + AluSx SINE Alu 141 311 -1 216 333 16 0 chr17 20842746 20842809 -64595671 + MIR SINE MIR 14 77 -185 214 206 145 99 chr17 20842812 20842943 -64595537 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20844013 20844041 -64594439 + AT_rich Low_complexity Low_complexity 1 28 0 223 221 145 99 chr17 20844340 20844471 -64594009 - MIR SINE MIR -82 180 44 193 250 23 0 chr17 20844474 20844518 -64593962 - MIR SINE MIR -185 77 33 340 261 126 8 chr17 20845090 20845209 -64593271 + MIR SINE MIR 7 139 -123 524 281 142 60 chr17 20845222 20845588 -64592892 - L2 LINE L2 -20 3252 2857 503 291 53 27 chr17 20845846 20845996 -64592484 + MIR3 SINE MIR 33 185 -42 202 306 0 0 chr17 20846398 20846483 -64591997 + (CCA)n Simple_repeat Simple_repeat 3 87 0 372 278 31 63 chr17 20847494 20847685 -64590795 + MIR SINE MIR 28 212 -50 4760 260 94 40 chr17 20849448 20849715 -64588765 + HAL1 LINE L1 102 353 -2154 2300 83 0 3 chr17 20849715 20850016 -64588464 + AluY SINE Alu 1 300 -11 4760 260 94 40 chr17 20850016 20850685 -64587795 + HAL1 LINE L1 353 984 -1523 1872 166 0 0 chr17 20850685 20850981 -64587499 - AluJb SINE Alu -16 296 1 4760 260 94 40 chr17 20850981 20852209 -64586271 + HAL1 LINE L1 984 2384 -123 3570 58 0 5 chr17 20852275 20852720 -64585760 + L1PA6 LINE L1 5711 6153 -1 2197 88 10 10 chr17 20852725 20853030 -64585450 + AluY SINE Alu 1 305 -6 27 0 0 0 chr17 20853056 20853083 -64585397 + AT_rich Low_complexity Low_complexity 1 27 0 450 298 13 20 chr17 20853672 20853844 -64584636 + MIR SINE MIR 3 174 -88 320 276 118 7 chr17 20857531 20857683 -64580797 + MIR3 SINE MIR 33 201 -7 392 258 39 8 chr17 20857762 20857890 -64580590 + MIR SINE MIR 20 151 -111 213 349 73 0 chr17 20858409 20858518 -64579962 - MIR SINE MIR -95 167 51 291 208 38 85 chr17 20858590 20858696 -64579784 - MIR SINE MIR -64 144 44 5650 128 26 25 chr17 20859130 20860067 -64578413 - LTR5 LTR ERVK 0 969 32 436 258 65 0 chr17 20861480 20861604 -64576876 + MIR SINE MIR 88 219 -43 301 274 108 38 chr17 20861629 20861815 -64576665 - L2 LINE L2 -12 3301 3103 182 326 22 56 chr17 20863252 20863341 -64575139 + MIR SINE MIR 61 146 -62 224 250 48 77 chr17 20864625 20864729 -64573751 - MIR SINE MIR -60 148 48 296 306 43 31 chr17 20872991 20873249 -64565231 + L2 LINE L2 2498 2758 -556 283 312 110 0 chr17 20874463 20874572 -64563908 + MIR3 SINE MIR 81 201 -7 216 0 0 0 chr17 20874904 20874928 -64563552 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 355 309 88 0 chr17 20875543 20875679 -64562801 + MIR SINE MIR 81 228 -34 192 269 0 0 chr17 20876503 20876555 -64561925 + L2 LINE L2 3007 3058 -214 2141 158 35 2 chr17 20876644 20877044 -64561436 + L1PB4 LINE L1 5539 5951 -205 1418 39 0 134 chr17 20877044 20877276 -64561204 - LTR14A LTR ERVK -143 201 1 198 253 27 40 chr17 20877344 20877419 -64561061 - MIR SINE MIR -133 129 56 534 288 76 0 chr17 20877469 20877653 -64560827 - L2 LINE L2 0 3313 3116 306 188 38 38 chr17 20877680 20877760 -64560720 - MER3 DNA MER1_type -5 204 125 2332 78 3 3 chr17 20877761 20878069 -64560411 + AluY SINE Alu 1 308 -3 216 333 16 0 chr17 20878161 20878224 -64560256 + MIR SINE MIR 14 77 -185 223 223 146 92 chr17 20878227 20878357 -64560123 + MIR SINE MIR 44 180 -82 21 36 0 0 chr17 20878657 20878685 -64559795 + AT_rich Low_complexity Low_complexity 1 28 0 190 214 145 99 chr17 20879757 20879888 -64558592 - MIR SINE MIR -82 180 44 216 333 16 0 chr17 20879891 20879954 -64558526 - MIR SINE MIR -185 77 14 2027 138 3 0 chr17 20880117 20880428 -64558052 - AluSx SINE Alu 0 312 1 1676 230 29 27 chr17 20880428 20880492 -64557988 - MLT1C-int LTR MaLR -749 622 560 1483 174 37 27 chr17 20880492 20880786 -64557694 - AluSx SINE Alu -15 297 1 1676 230 29 27 chr17 20880786 20881156 -64557324 - MLT1C-int LTR MaLR -811 560 184 1979 144 10 0 chr17 20881411 20881716 -64556764 + AluSq SINE Alu 1 308 -5 232 359 33 0 chr17 20881848 20881940 -64556540 + L2 LINE L2 3192 3286 -27 1218 239 87 34 chr17 20882583 20883019 -64555461 - MLT1C LTR MaLR 0 467 9 2168 62 10 7 chr17 20883445 20883734 -64554746 + AluY SINE Alu 17 306 -5 2119 91 3 3 chr17 20884206 20884502 -64553978 - AluSg SINE Alu -14 296 1 269 342 0 51 chr17 20884521 20884679 -64553801 + C-rich Low_complexity Low_complexity 2 151 0 208 274 0 0 chr17 20884735 20884786 -64553694 + (CGG)n Simple_repeat Simple_repeat 2 52 0 222 292 22 11 chr17 20885216 20885305 -64553175 + G-rich Low_complexity Low_complexity 1 90 0 248 322 11 35 chr17 20885391 20885565 -64552915 + G-rich Low_complexity Low_complexity 2 171 0 261 349 17 11 chr17 20885681 20885856 -64552624 + GA-rich Low_complexity Low_complexity 4 179 0 367 287 0 48 chr17 20885858 20886096 -64552384 + G-rich Low_complexity Low_complexity 1 226 0 342 339 6 18 chr17 20886041 20886212 -64552268 + GA-rich Low_complexity Low_complexity 1 169 0 * 879 184 6 0 chr17 20887194 20887352 -64551128 + AluJb SINE Alu 1 159 -153 2190 83 41 0 chr17 20889009 20889299 -64549181 - AluYa5 SINE Alu -9 302 1 402 68 17 0 chr17 20890362 20890421 -64548059 + HY3 scRNA scRNA 18 77 -24 1993 124 23 0 chr17 20890878 20891177 -64547303 + AluSx SINE Alu 3 308 -4 24 0 0 0 chr17 20891197 20891221 -64547259 + AT_rich Low_complexity Low_complexity 1 24 0 382 332 45 68 chr17 20891669 20891906 -64546574 + HAL1 LINE L1 904 1136 -1371 1872 85 4 0 chr17 20891906 20892154 -64546326 + AluY SINE Alu 1 249 -62 382 332 45 68 chr17 20892154 20892181 -64546299 + HAL1 LINE L1 1136 1162 -1345 202 380 77 10 chr17 20892190 20892385 -64546095 + L2 LINE L2 2542 2749 -565 4028 137 71 18 chr17 20892408 20893152 -64545328 - L1PA10 LINE L1 0 6168 5385 422 250 9 81 chr17 20893413 20893646 -64544834 + LTR41 LTR ERVL 469 717 -78 1012 75 90 232 chr17 20893646 20893732 -64544748 - MER30 DNA MER1_type -1 229 132 1900 127 7 13 chr17 20893732 20894031 -64544449 + AluSx SINE Alu 1 297 -15 1991 115 27 10 chr17 20894033 20894328 -64544152 + AluSc SINE Alu 1 300 -9 1012 75 90 232 chr17 20894328 20894505 -64543975 - MER30 DNA MER1_type -99 131 1 422 250 9 81 chr17 20894505 20894607 -64543873 + LTR41 LTR ERVL 717 791 -4 259 326 186 33 chr17 20894609 20895068 -64543412 + L2 LINE L2 2787 3312 -1 576 285 43 24 chr17 20895122 20895375 -64543105 + MIR SINE MIR 2 259 -3 1376 293 39 21 chr17 20899354 20900020 -64538460 - L1MC3 LINE L1 -1629 6156 5479 203 349 28 46 chr17 20904748 20904857 -64533623 + MIR SINE MIR 82 188 -74 1421 179 111 29 chr17 20905251 20905592 -64532888 - THE1C LTR MaLR 0 375 7 183 80 0 0 chr17 20906140 20906165 -64532315 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 223 167 24 0 chr17 20906652 20906694 -64531786 + C-rich Low_complexity Low_complexity 4 46 0 228 318 0 11 chr17 20906993 20907081 -64531399 + GA-rich Low_complexity Low_complexity 2 88 0 711 292 36 24 chr17 20907134 20907384 -64531096 + MER89-int LTR ERV1 1407 1659 -5142 323 261 134 32 chr17 20908812 20908969 -64529511 + L1MEc LINE L1 1916 2088 -4308 435 63 0 0 chr17 20908972 20909035 -64529445 + (TA)n Simple_repeat Simple_repeat 2 64 0 1474 193 3 14 chr17 20909048 20909333 -64529147 - AluJb SINE Alu -30 282 1 1322 6 0 6 chr17 20909360 20909516 -64528964 + (TCTCCC)n Simple_repeat Simple_repeat 1 155 0 5667 66 62 9 chr17 20909538 20910650 -64527830 + SVA Other Other 2 1386 0 23 0 0 0 chr17 20910685 20910708 -64527772 + AT_rich Low_complexity Low_complexity 1 23 0 831 245 13 52 chr17 20910748 20910981 -64527499 + MER58A DNA MER1_type 1 224 0 496 255 98 0 chr17 20910983 20911136 -64527344 - L2 LINE L2 -653 2661 2494 2301 89 0 13 chr17 20911226 20911540 -64526940 + AluY SINE Alu 1 310 -1 1722 158 29 78 chr17 20912006 20912416 -64526064 + MLT1B LTR MaLR 1 390 0 361 209 7 27 chr17 20913337 20913485 -64524995 + CT-rich Low_complexity Low_complexity 1 145 0 180 156 16 47 chr17 20913531 20913595 -64524885 + CT-rich Low_complexity Low_complexity 5 66 0 2039 179 13 98 chr17 20913693 20914018 -64524462 + L1MB5 LINE L1 5380 5644 -530 1815 115 0 7 chr17 20914018 20914285 -64524195 + L1PB1 LINE L1 5883 6150 -1 2039 179 13 98 chr17 20914285 20914489 -64523991 + L1MB5 LINE L1 5644 5864 -310 1248 229 6 16 chr17 20914518 20914832 -64523648 + AluJo SINE Alu 1 311 -1 2055 129 0 0 chr17 20914839 20915134 -64523346 + AluSc SINE Alu 7 301 -8 2345 71 19 84 chr17 20915738 20916105 -64522375 - LTR14A LTR ERVK -1 343 1 187 189 68 81 chr17 20916173 20916247 -64522233 - MIR SINE MIR -78 130 58 511 288 76 0 chr17 20916298 20916482 -64521998 - L2 LINE L2 0 3313 3116 324 203 38 25 chr17 20916509 20916588 -64521892 - MER3 DNA MER1_type -5 204 125 1110 60 0 0 chr17 20916589 20916723 -64521757 + AluY SINE Alu 1 134 -177 1882 129 24 3 chr17 20916723 20917017 -64521463 + AluY SINE Alu 1 300 -11 1793 116 4 0 chr17 20918185 20918435 -64520045 + AluSx SINE Alu 55 303 -9 2215 119 6 0 chr17 20918812 20919123 -64519357 - AluSp SINE Alu 0 313 1 495 224 80 0 chr17 20919292 20919448 -64519032 - MER3 DNA MER1_type -55 154 1 300 283 214 26 chr17 20919541 20919887 -64518593 - L2 LINE L2 -351 2963 2553 261 178 314 8 chr17 20920482 20920600 -64517880 + L2 LINE L2 2895 3048 -265 378 323 15 8 chr17 20920643 20920773 -64517707 + L2 LINE L2 3136 3266 -6 262 278 14 0 chr17 20920875 20920947 -64517533 - MIR SINE MIR -74 134 62 203 94 0 0 chr17 20921766 20921798 -64516682 + L2 LINE L2 2922 2953 -360 202 364 68 17 chr17 20921966 20922142 -64516338 + MIR3 SINE MIR 7 191 -17 1309 266 69 47 chr17 20922687 20923310 -64515170 + L1MC4a LINE L1 5256 5892 -1916 346 291 113 0 chr17 20923883 20924024 -64514456 - MIR SINE MIR -101 161 5 331 285 254 29 chr17 20924374 20924788 -64513692 - MER69 DNA AcHobo -1019 207 31 227 270 95 0 chr17 20925501 20925564 -64512916 + L2 LINE L2 3148 3216 -56 315 250 143 0 chr17 20925676 20925760 -64512720 - MIR SINE MIR -117 145 50 316 228 39 47 chr17 20926361 20926382 -64512098 + L1MC4 LINE L1 7913 7933 -109 2040 163 0 7 chr17 20926382 20926689 -64511791 + AluSx SINE Alu 1 305 -7 316 228 39 47 chr17 20926689 20926794 -64511686 + L1MC4 LINE L1 7933 8038 -4 434 302 83 53 chr17 20926960 20927298 -64511182 - L1ME4a LINE L1 -224 5897 5550 1626 130 4 0 chr17 20927342 20927572 -64510908 + AluSq SINE Alu 68 298 -15 703 276 105 16 chr17 20927644 20928014 -64510466 - L1ME4a LINE L1 -262 5859 5457 23 0 0 0 chr17 20928097 20928120 -64510360 + AT_rich Low_complexity Low_complexity 1 23 0 1346 62 0 4 chr17 20928613 20928826 -64509654 - AluY SINE Alu -8 303 1 229 25 0 50 chr17 20928911 20928951 -64509529 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 462 222 68 12 chr17 20929016 20929178 -64509302 - L1ME4a LINE L1 -1 6120 5950 352 226 97 86 chr17 20929283 20929469 -64509011 - L1 LINE L1 -2984 3162 2975 3886 124 50 19 chr17 20929956 20930599 -64507881 + THE1C-int LTR MaLR 918 1580 0 2014 146 52 22 chr17 20930599 20930963 -64507517 + THE1C LTR MaLR 1 375 0 1564 209 0 22 chr17 20931289 20931605 -64506875 - AluJo SINE Alu -1 311 3 1654 146 20 0 chr17 20933366 20933619 -64504861 - AluJb SINE Alu -52 260 3 670 124 0 0 chr17 20933766 20933871 -64504609 - AluSg/x SINE Alu -3 306 202 339 109 0 0 chr17 20933898 20933953 -64504527 + Alu SINE Alu 248 302 0 354 250 200 21 chr17 20934876 20935016 -64503464 - MIR SINE MIR -80 182 18 2321 94 0 10 chr17 20935290 20935589 -64502891 + AluSx SINE Alu 1 296 -16 2163 133 0 0 chr17 20935589 20935883 -64502597 + AluSc SINE Alu 1 294 -15 2236 113 0 3 chr17 20935889 20936191 -64502289 + AluSx SINE Alu 1 301 -11 1941 153 0 10 chr17 20936198 20936511 -64501969 + AluJb SINE Alu 1 310 -2 286 234 169 85 chr17 20936511 20936712 -64501768 - L2 LINE L2 -210 3103 2886 321 120 15 32 chr17 20936720 20936809 -64501671 + AluJo/FLAM SINE Alu 72 133 -169 2320 106 0 13 chr17 20936811 20936946 -64501534 + AluSx SINE Alu 1 136 -176 2178 112 23 3 chr17 20936946 20937251 -64501229 + AluSx SINE Alu 1 311 -1 2320 106 0 13 chr17 20937251 20937426 -64501054 + AluSx SINE Alu 136 307 -5 2532 50 7 3 chr17 20937429 20937730 -64500750 + AluY SINE Alu 1 302 -9 255 266 78 0 chr17 20938029 20938093 -64500387 - MIR SINE MIR -110 152 84 1494 103 0 28 chr17 20938228 20938442 -64500038 - AluY SINE Alu 0 311 104 251 108 0 0 chr17 20938542 20938605 -64499875 + Alu SINE Alu 246 308 0 414 272 43 52 chr17 20938606 20938952 -64499528 - L1M1 LINE L1 -4291 3274 2932 * 497 259 36 49 chr17 20938938 20939162 -64499318 - L1M4 LINE L1 -5868 674 454 554 278 34 11 chr17 20939171 20939434 -64499046 - L1M4 LINE L1 -3098 3048 2780 403 253 13 12 chr17 20939432 20939446 -64499034 - L1PBa LINE L1 -5072 1791 1779 * 895 111 7 0 chr17 20939446 20939581 -64498899 - L1PB2 LINE L1 -1 6150 6015 403 253 13 12 chr17 20939581 20940247 -64498233 - L1PBa LINE L1 -5084 1779 1012 762 203 32 101 chr17 20940251 20940468 -64498012 - AluJo SINE Alu -6 306 105 2268 108 3 19 chr17 20940607 20940921 -64497559 + AluSp SINE Alu 1 309 -4 196 306 111 14 chr17 20940947 20941019 -64497461 - MIR SINE MIR -106 102 24 324 312 63 63 chr17 20941125 20941243 -64497237 - MER5A DNA MER1_type 0 189 69 2359 74 14 0 chr17 20941243 20941526 -64496954 - AluSp SINE Alu -11 302 16 324 312 63 63 chr17 20941526 20941596 -64496884 - MER5A DNA MER1_type -119 70 1 1997 134 44 7 chr17 20941882 20942180 -64496300 - AluJb SINE Alu -3 309 1 279 0 0 0 chr17 20942610 20942620 -64495860 + (TG)n Simple_repeat Simple_repeat 1 41 0 279 0 0 0 chr17 20942620 20942651 -64495829 + (TG)n Simple_repeat Simple_repeat 2 32 0 2330 103 3 3 chr17 20942668 20942968 -64495512 - AluSp SINE Alu -13 300 1 26 0 0 0 chr17 20942979 20943005 -64495475 + AT_rich Low_complexity Low_complexity 1 26 0 1237 260 59 17 chr17 20943368 20943776 -64494704 - L1ME3A LINE L1 -115 6055 5631 2471 87 0 0 chr17 20944244 20944544 -64493936 + AluSq SINE Alu 1 300 -13 2543 68 0 0 chr17 20944672 20944983 -64493497 + AluY SINE Alu 1 311 0 1013 144 0 0 chr17 20944992 20945138 -64493342 + AluSc SINE Alu 145 290 -19 2598 44 3 0 chr17 20945138 20945432 -64493048 + AluY SINE Alu 1 295 -16 223 176 59 39 chr17 20946054 20946105 -64492375 - MER5A DNA MER1_type -137 52 1 381 286 18 0 chr17 20947104 20947216 -64491264 - L2 LINE L2 -5 3267 3154 509 308 153 31 chr17 20947499 20948186 -64490294 - L2 LINE L2 -231 3082 2317 3239 40 10 7 chr17 20948296 20948699 -64489781 + L1PA7 LINE L1 5751 6154 0 2446 73 3 0 chr17 20948747 20949049 -64489431 + AluY SINE Alu 1 303 -8 2588 50 3 0 chr17 20949058 20949358 -64489122 + AluY SINE Alu 1 301 -10 962 262 34 17 chr17 20950207 20950501 -64487979 - MER89-int LTR ERV1 -5142 1659 1361 1513 207 54 6 chr17 20950510 20950843 -64487637 - MLT1A1 LTR MaLR -4 361 13 309 219 0 37 chr17 20950848 20950930 -64487550 - MER89-int LTR ERV1 -5438 1363 1285 268 356 15 0 chr17 20952052 20952187 -64486293 + (CA)n Simple_repeat Simple_repeat 1 137 0 2438 77 0 3 chr17 20955747 20956047 -64482433 + AluY SINE Alu 1 299 -12 1216 92 12 18 chr17 20956047 20956210 -64482270 + AluSc SINE Alu 132 293 -16 180 0 0 0 chr17 20956252 20956272 -64482208 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 639 130 74 0 chr17 20956278 20956386 -64482094 - AluSp/q SINE Alu -24 289 174 255 93 0 0 chr17 20956401 20956444 -64482036 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 2068 115 0 10 chr17 20956444 20956732 -64481748 - AluSq SINE Alu -28 285 1 1114 202 0 9 chr17 20957060 20957278 -64481202 - U3 snRNA snRNA -1 216 1 23 54 0 0 chr17 20957453 20957490 -64480990 + AT_rich Low_complexity Low_complexity 1 37 0 1053 157 22 101 chr17 20957616 20957883 -64480597 + AluJo SINE Alu 45 290 -22 1623 154 20 26 chr17 20957899 20958243 -64480237 - L1MB4 LINE L1 -16 6164 5823 1528 162 8 19 chr17 20958254 20958513 -64479967 - AluJb SINE Alu -55 257 2 1244 63 6 19 chr17 20958513 20958665 -64479815 - AluYa5 SINE Alu -7 304 153 593 133 33 33 chr17 20958765 20958885 -64479595 + AluSp/q SINE Alu 193 312 -1 1734 251 54 8 chr17 20958885 20959386 -64479094 - L1M4 LINE L1 -1819 4327 3804 871 124 0 0 chr17 20959386 20959515 -64478965 + LOR1a LTR ERV1 369 497 0 422 241 83 0 chr17 20959515 20959641 -64478839 + MLT1C LTR MaLR 268 404 -63 2170 128 7 0 chr17 20959652 20959942 -64478538 - AluSx SINE Alu -20 292 1 1027 206 67 18 chr17 20959959 20960202 -64478278 - L1MD2 LINE L1 -15 6344 6023 1724 170 0 44 chr17 20960202 20960382 -64478098 - AluJo SINE Alu -9 303 141 2358 60 10 17 chr17 20960382 20960680 -64477800 - AluY SINE Alu -15 296 1 1724 170 0 44 chr17 20960680 20960816 -64477664 - AluJo SINE Alu -171 141 1 1027 206 67 18 chr17 20960816 20960960 -64477520 - L1MD2 LINE L1 -336 6023 5887 1951 114 0 0 chr17 20960962 20961217 -64477263 - AluSx SINE Alu -12 300 46 2967 162 99 25 chr17 20961562 20961844 -64476636 + MER67C LTR ERV1 3 262 -448 2426 62 14 0 chr17 20961844 20962136 -64476344 + AluSp SINE Alu 1 296 -17 2967 162 99 25 chr17 20962136 20962507 -64475973 + MER67C LTR ERV1 262 705 -5 2121 85 4 0 chr17 20962507 20962766 -64475714 + AluSp SINE Alu 1 260 -53 2503 83 0 6 chr17 20962766 20963077 -64475403 + AluSg SINE Alu 1 310 0 1115 162 0 0 chr17 20963079 20963252 -64475228 + AluSg/x SINE Alu 135 307 -5 1733 173 27 20 chr17 20963260 20963560 -64474920 + AluJb SINE Alu 1 302 -10 652 196 22 73 chr17 20963581 20963760 -64474720 - L1 LINE L1 -1156 4990 4821 501 206 28 0 chr17 20963778 20963919 -64474561 + GA-rich Low_complexity Low_complexity 2 146 0 2275 129 0 0 chr17 20963920 20964229 -64474251 + AluSg SINE Alu 1 309 -1 257 204 0 20 chr17 20964229 20964278 -64474202 + polypurine Low_complexity Low_complexity 1 48 0 691 222 149 0 chr17 20964278 20964472 -64474008 + MLT1G3 LTR MaLR 78 300 -230 576 260 23 55 chr17 20964691 20964844 -64473636 + LTR16C LTR ERVL 270 415 -76 2252 120 10 0 chr17 20964844 20965145 -64473335 + AluSx SINE Alu 9 312 0 576 260 23 55 chr17 20965145 20965210 -64473270 + LTR16C LTR ERVL 415 481 -10 777 297 52 0 chr17 20965219 20965451 -64473029 + MIR SINE MIR 8 251 -11 272 264 96 45 chr17 20965473 20965651 -64472829 - MLT1K LTR MaLR -46 542 356 2193 132 3 0 chr17 20965674 20965970 -64472510 + AluSq SINE Alu 7 303 -10 1938 137 25 0 chr17 20965990 20966275 -64472205 + AluSq SINE Alu 12 303 -10 1015 118 0 7 chr17 20966275 20966411 -64472069 + AluSq/x SINE Alu 1 135 -177 2266 54 0 0 chr17 20966411 20966669 -64471811 + AluY SINE Alu 1 258 -53 243 250 12 6 chr17 20967001 20967161 -64471319 + (TG)n Simple_repeat Simple_repeat 1 161 0 199 262 6 6 chr17 20967188 20967356 -64471124 + (TG)n Simple_repeat Simple_repeat 1 168 0 234 195 0 0 chr17 20967410 20967451 -64471029 + L2 LINE L2 3016 3056 -216 296 275 12 12 chr17 20967595 20967675 -64470805 + L2 LINE L2 3229 3308 -5 491 232 252 0 chr17 20968033 20968184 -64470296 - MER5A DNA MER1_type 0 189 1 2056 103 35 35 chr17 20968372 20968683 -64469797 + AluY SINE Alu 1 311 0 319 245 192 6 chr17 20968730 20968893 -64469587 + MIR SINE MIR 16 209 -53 190 266 0 62 chr17 20968927 20968991 -64469489 + MIR SINE MIR 93 149 -59 457 265 244 17 chr17 20969084 20969322 -64469158 + L2 LINE L2 3021 3312 -1 276 364 93 12 chr17 20969910 20970072 -64468408 + MIR SINE MIR 13 187 -75 1851 143 0 7 chr17 20970564 20970843 -64467637 - AluSx SINE Alu -35 277 1 383 259 86 26 chr17 20971081 20971197 -64467283 + L1ME4a LINE L1 5559 5681 -440 757 241 6 13 chr17 20971204 20971362 -64467118 + AluJo SINE Alu 125 281 -31 243 0 0 0 chr17 20971365 20971392 -64467088 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 506 234 93 93 chr17 20971438 20971835 -64466645 + L1ME4a LINE L1 5725 6121 0 707 226 104 83 chr17 20972065 20972525 -64465955 + MER113 DNA MER1_type? 1 470 -51 314 248 171 0 chr17 20972625 20972730 -64465750 + L2 LINE L2 3149 3271 -1 278 263 352 0 chr17 20973177 20973356 -64465124 - MIR SINE MIR -20 242 1 263 362 156 12 chr17 20973500 20973743 -64464737 - L2 LINE L2 -6 3307 3030 725 129 10 0 chr17 20974080 20974181 -64464299 - AluJ/FLAM SINE Alu -210 102 1 888 264 90 0 chr17 20974182 20974516 -64463964 - MER113 DNA MER1_type? -112 409 46 2431 64 0 0 chr17 20975350 20975647 -64462833 + AluY SINE Alu 14 310 -1 346 269 126 8 chr17 20976700 20976819 -64461661 + MIR SINE MIR 7 139 -123 560 290 139 57 chr17 20976832 20977198 -64461282 - L2 LINE L2 -20 3252 2857 2159 120 0 0 chr17 20977244 20977543 -64460937 + AluSx SINE Alu 1 299 -13 270 211 42 14 chr17 20977550 20977621 -64460859 + MIR SINE MIR 162 234 -28 241 169 153 0 chr17 20978073 20978132 -64460348 + L2 LINE L2 3204 3271 -1 801 171 23 0 chr17 20980162 20980291 -64458189 - FLAM_A SINE Alu 0 133 2 226 319 166 47 chr17 20980834 20981003 -64457477 - MER5A DNA MER1_type 0 189 1 333 315 115 45 chr17 20981335 20981505 -64456975 + MIR3 SINE MIR 8 188 -20 500 312 40 13 chr17 20982016 20982166 -64456314 + MIR3 SINE MIR 33 185 -42 220 299 0 0 chr17 20982569 20982656 -64455824 + (CCA)n Simple_repeat Simple_repeat 1 87 0 417 278 31 63 chr17 20983661 20983852 -64454628 + MIR SINE MIR 28 212 -50 1340 274 106 63 chr17 20985608 20985875 -64452605 + HAL1 LINE L1 102 356 -2151 1723 104 119 11 chr17 20985875 20986143 -64452337 + AluSc SINE Alu 1 297 -12 1340 274 106 63 chr17 20986143 20986749 -64451731 + HAL1 LINE L1 356 1013 -1494 22 56 0 0 chr17 20987213 20987249 -64451231 + GC_rich Low_complexity Low_complexity 1 36 0 222 310 0 60 chr17 20987401 20987501 -64450979 + MIR SINE MIR 60 153 -109 250 340 19 28 chr17 20988286 20988392 -64450088 - L2 LINE L2 -41 3231 3127 272 295 26 0 chr17 20988410 20988488 -64449992 - MIR SINE MIR -110 152 73 182 250 0 0 chr17 20988820 20988872 -64449608 + L3 LINE CR1 1423 1474 -103 308 261 65 0 chr17 20989409 20989501 -64448979 - MIR3 SINE MIR -49 159 62 346 289 19 10 chr17 20989635 20989739 -64448741 + MIR SINE MIR 17 121 -141 299 272 78 0 chr17 20990130 20990233 -64448247 - L2 LINE L2 -245 3027 2917 371 242 117 25 chr17 20990466 20990635 -64447845 - MIR SINE MIR -63 145 11 364 276 31 0 chr17 20991736 20991834 -64446646 - MIR SINE MIR -122 140 40 1974 108 39 0 chr17 20992424 20992728 -64445752 - AluSx SINE Alu 0 315 1 225 267 47 12 chr17 20993973 20994059 -64444421 - L2 LINE L2 -261 3011 2923 2154 106 0 7 chr17 20995478 20995770 -64442710 - AluSx SINE Alu -22 290 1 2091 100 0 7 chr17 20995777 20996081 -64442399 - AluSp SINE Alu 0 313 19 303 314 0 0 chr17 20998690 20998795 -64439685 + GA-rich Low_complexity Low_complexity 1 105 0 202 229 16 16 chr17 20999562 20999623 -64438857 + (CAGG)n Simple_repeat Simple_repeat 4 64 0 22 70 0 0 chr17 21000645 21000688 -64437792 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr17 21000852 21000881 -64437599 + GC_rich Low_complexity Low_complexity 1 29 0 2353 81 0 7 chr17 21001056 21001364 -64437116 + AluY SINE Alu 1 306 -5 2230 68 4 0 chr17 21002192 21002506 -64435974 + AluY SINE Alu 1 315 0 185 289 218 27 chr17 21005090 21005457 -64433023 + L2 LINE L2 2084 2520 -794 2176 78 7 14 chr17 21006579 21006872 -64431608 - AluSx SINE Alu -21 291 1 401 262 19 10 chr17 21008239 21008342 -64430138 - L2 LINE L2 -1 3271 3168 203 259 0 37 chr17 21009044 21009098 -64429382 - L2 LINE L2 0 3272 3221 221 30 61 0 chr17 21011321 21011354 -64427126 + (CAGG)n Simple_repeat Simple_repeat 4 38 0 2094 125 0 7 chr17 21013636 21013941 -64424539 + AluSg1 SINE Alu 3 305 -4 229 301 64 16 chr17 21013968 21014082 -64424398 - MIR3 SINE MIR -54 154 63 1112 53 0 0 chr17 21014900 21015032 -64423448 - AluY SINE Alu -179 132 1 2099 135 7 0 chr17 21015033 21015336 -64423144 - AluSx SINE Alu -7 305 1 828 113 9 0 chr17 21016130 21016245 -64422235 - FLAM_C SINE Alu -15 118 3 2946 198 99 19 chr17 21016656 21016942 -64421538 + MER21B LTR ERV1 5 267 -596 1964 123 6 44 chr17 21016942 21017260 -64421220 + AluSg SINE Alu 1 306 -4 2946 198 99 19 chr17 21017260 21017757 -64420723 + MER21B LTR ERV1 267 851 -12 2069 91 45 0 chr17 21017867 21018154 -64420326 - AluSp SINE Alu -13 300 1 446 294 106 49 chr17 21018822 21019067 -64419413 + MIR SINE MIR 4 262 0 229 330 46 55 chr17 21019229 21019338 -64419142 - MIR SINE MIR -6 256 149 206 304 20 39 chr17 21020168 21020270 -64418210 + MIR SINE MIR 50 149 -59 34 0 0 22 chr17 21021064 21021096 -64417384 + AT_rich Low_complexity Low_complexity 1 33 -11 2036 132 7 0 chr17 21021096 21021384 -64417096 - AluSx SINE Alu -22 290 1 34 0 0 22 chr17 21021384 21021396 -64417084 + AT_rich Low_complexity Low_complexity 33 44 0 883 185 6 6 chr17 21021396 21021558 -64416922 + AluJb SINE Alu 131 292 -20 1016 90 0 0 chr17 21021564 21021697 -64416783 + AluY SINE Alu 1 133 -178 2320 79 0 0 chr17 21021697 21021989 -64416491 + AluY SINE Alu 1 292 -19 1039 216 112 14 chr17 21021990 21022268 -64416212 - Charlie1b DNA MER1_type -2380 381 61 2247 94 0 0 chr17 21022268 21022555 -64415925 - AluSc SINE Alu -22 287 1 1039 216 112 14 chr17 21022555 21022623 -64415857 - Charlie1b DNA MER1_type -2700 61 1 317 324 117 45 chr17 21023778 21024000 -64414480 - MIR SINE MIR -5 257 20 2212 101 10 3 chr17 21024042 21024349 -64414131 - AluSp SINE Alu -4 309 1 216 246 28 39 chr17 21024352 21024442 -64414038 - MIR SINE MIR -62 146 61 261 202 146 22 chr17 21024607 21024696 -64413784 + MIR SINE MIR 79 178 -84 2269 68 3 7 chr17 21025298 21025590 -64412890 + AluY SINE Alu 1 291 -20 2398 44 3 38 chr17 21025590 21025907 -64412573 + AluY SINE Alu 1 306 -5 1802 122 90 0 chr17 21025934 21026212 -64412268 - AluJb SINE Alu -7 305 3 1963 95 43 23 chr17 21027014 21027319 -64411161 + AluSx SINE Alu 1 311 -1 1567 169 36 11 chr17 21027328 21027606 -64410874 + AluJo SINE Alu 1 285 -27 212 364 74 11 chr17 21027902 21028078 -64410402 - MIR SINE MIR -41 221 35 2819 191 32 49 chr17 21028213 21028296 -64410184 - L1MB5 LINE L1 -184 5990 5907 1655 111 118 11 chr17 21028296 21028567 -64409913 + AluSg1 SINE Alu 1 300 -9 2819 191 32 49 chr17 21028567 21029155 -64409325 - L1MB5 LINE L1 -267 5907 5331 2214 104 3 13 chr17 21029155 21029471 -64409009 - AluSq SINE Alu 0 313 1 2819 191 32 49 chr17 21029471 21029548 -64408932 - L1MB5 LINE L1 -843 5331 5254 226 267 25 83 chr17 21029620 21029740 -64408740 + MIR SINE MIR 27 139 -69 2249 177 63 72 chr17 21030777 21031336 -64407144 + MLT2B3 LTR ERVL 1 554 0 1881 152 7 10 chr17 21031634 21031937 -64406543 + AluSx SINE Alu 1 302 -10 560 165 0 0 chr17 21031948 21032033 -64406447 + AluJ/FLAM SINE Alu 8 92 -220 1166 188 58 0 chr17 21032047 21032270 -64406210 - AluJo SINE Alu -76 236 1 337 243 93 28 chr17 21033208 21033315 -64405165 - MIR SINE MIR -36 226 113 2252 85 0 3 chr17 21033862 21034155 -64404325 + AluSc SINE Alu 1 292 -17 1595 209 36 25 chr17 21034333 21034692 -64403788 + MLT1A1 LTR MaLR 1 363 -2 2046 112 0 7 chr17 21034714 21035021 -64403459 - AluSp SINE Alu 0 305 1 2212 104 0 0 chr17 21035028 21035325 -64403155 - AluSc SINE Alu -12 297 1 191 175 75 0 chr17 21037766 21037806 -64400674 + MIR SINE MIR 93 135 -73 266 319 11 0 chr17 21037861 21037955 -64400525 - MIR SINE MIR -56 152 58 263 278 56 0 chr17 21041051 21041141 -64397339 + MIR3 SINE MIR 61 155 -53 193 297 69 76 chr17 21041188 21041333 -64397147 - L2 LINE L2 -18 3254 3111 234 282 239 8 chr17 21041355 21041472 -64397008 - MIR SINE MIR 0 262 119 802 141 0 8 chr17 21041474 21041602 -64396878 + AluJo/FLAM SINE Alu 5 131 -181 2255 39 13 46 chr17 21041605 21041911 -64396569 + AluY SINE Alu 1 296 -15 1424 172 65 38 chr17 21042043 21042177 -64396303 + AluJo SINE Alu 1 130 -172 2105 84 6 47 chr17 21042177 21042499 -64395981 + AluY SINE Alu 1 309 -2 1424 172 65 38 chr17 21042499 21042654 -64395826 + AluJo SINE Alu 130 298 -4 241 256 61 12 chr17 21044339 21044421 -64394059 + MIR SINE MIR 59 144 -118 237 319 14 0 chr17 21045290 21045359 -64393121 + MIR SINE MIR 62 131 -77 369 253 312 5 chr17 21045594 21045815 -64392665 + L2 LINE L2 2472 2760 -554 824 263 121 26 chr17 21045816 21046162 -64392318 + L2 LINE L2 2913 3291 -22 1840 145 14 17 chr17 21046505 21046801 -64391679 + AluJb SINE Alu 1 295 -17 222 289 0 0 chr17 21047232 21047284 -64391196 + MIR SINE MIR 87 138 -70 244 200 0 0 chr17 21047584 21047629 -64390851 - MIR SINE MIR -62 146 102 198 103 0 0 chr17 21047673 21047702 -64390778 + (CAGGG)n Simple_repeat Simple_repeat 3 31 0 358 243 30 30 chr17 21047886 21048055 -64390425 + (CAGAGA)n Simple_repeat Simple_repeat 2 170 0 186 342 40 0 chr17 21048453 21048529 -64389951 + MIR SINE MIR 90 168 -94 210 340 40 27 chr17 21048534 21048684 -64389796 + L2 LINE L2 2873 3024 -248 398 317 32 0 chr17 21049223 21049346 -64389134 - MIR SINE MIR -19 243 117 194 245 75 0 chr17 21049429 21049482 -64388998 + MIR SINE MIR 16 72 -136 661 164 0 0 chr17 21049509 21049619 -64388861 + AluJb SINE Alu 1 110 -202 332 209 230 97 chr17 21099630 21099826 -64338654 + MLT1K LTR MaLR 367 588 0 348 242 140 4 chr17 21100540 21100674 -64337806 - MIR SINE MIR -58 204 57 1886 118 17 17 chr17 21100685 21100973 -64337507 - AluSx SINE Alu -24 288 1 2314 76 3 0 chr17 21100989 21101290 -64337190 - AluSp SINE Alu -11 302 1 21 0 0 0 chr17 21101316 21101337 -64337143 + AT_rich Low_complexity Low_complexity 1 21 0 326 308 67 0 chr17 21101417 21101521 -64336959 + L2 LINE L2 3203 3313 0 2081 108 0 31 chr17 21101586 21101909 -64336571 - AluSq SINE Alu 0 313 1 470 256 129 3 chr17 21101960 21102133 -64336347 + L1ME LINE L1 5468 5661 -460 665 268 48 0 chr17 21102283 21102451 -64336029 - MIR SINE MIR -67 195 20 826 132 7 0 chr17 21102675 21102811 -64335669 + AluSg/x SINE Alu 161 297 -15 2165 128 0 0 chr17 21102861 21103173 -64335307 + AluSx SINE Alu 1 312 0 273 266 74 106 chr17 21103364 21103586 -64334894 - MIR3 SINE MIR -46 216 8 578 216 116 25 chr17 21103929 21104128 -64334352 - MLT1F LTR MaLR -19 523 307 260 253 22 99 chr17 21104129 21104311 -64334169 + HAL1 LINE L1 101 268 -2239 866 149 58 0 chr17 21104367 21104521 -64333959 + AluJo SINE Alu 120 282 -30 295 183 0 17 chr17 21104547 21104607 -64333873 - MER63 DNA MER1_type -230 830 772 271 287 113 105 chr17 21104619 21104999 -64333481 - L2 LINE L2 -3 3269 2887 369 253 222 45 chr17 21105027 21105383 -64333097 - MLT1K LTR MaLR -24 564 146 636 244 86 38 chr17 21105767 21105976 -64332504 + MIR SINE MIR 5 223 -39 2241 82 0 3 chr17 21106126 21106420 -64332060 + AluSx SINE Alu 1 293 -19 629 282 117 24 chr17 21106535 21106577 -64331903 - MIR SINE MIR -17 245 208 2161 62 0 28 chr17 21106577 21106891 -64331589 - AluSg SINE Alu 0 306 1 629 282 117 24 chr17 21106891 21107053 -64331427 - MIR SINE MIR -54 208 21 225 196 22 0 chr17 21107388 21107434 -64331046 + (CTGGGG)n Simple_repeat Simple_repeat 2 48 0 202 293 12 0 chr17 21107393 21107475 -64331005 + G-rich Low_complexity Low_complexity 6 88 0 * 283 330 43 0 chr17 21108618 21108733 -64329747 + MIR SINE MIR 66 185 -77 2161 88 10 3 chr17 21108915 21109211 -64329269 - AluSg SINE Alu -8 302 5 1965 120 17 3 chr17 21109227 21109527 -64328953 - AluSx SINE Alu -8 304 1 310 252 101 34 chr17 21109604 21109723 -64328757 - L2 LINE L2 -3 3310 3184 2360 87 3 0 chr17 21110354 21110665 -64327815 + AluSp SINE Alu 1 312 -1 651 331 89 23 chr17 21110824 21111055 -64327425 + L3 LINE CR1 1119 1333 -244 1888 128 7 0 chr17 21111055 21111359 -64327121 - AluSx SINE Alu 0 306 1 651 331 89 23 chr17 21111359 21111555 -64326925 + L3 LINE CR1 1333 1575 -2 255 330 123 47 chr17 21111704 21111916 -64326564 - MIR SINE MIR -21 241 14 2133 85 3 0 chr17 21111964 21112290 -64326190 - AluY SINE Alu 0 328 2 797 232 185 31 chr17 21112303 21112562 -64325918 - AluSg SINE Alu -1 299 1 2156 98 0 3 chr17 21112655 21112998 -64325482 - AluSx SINE Alu 0 349 8 2034 109 12 43 chr17 21113003 21113325 -64325155 - AluSq SINE Alu -1 312 1 2078 109 3 0 chr17 21113468 21113762 -64324718 - AluSg SINE Alu -15 295 1 2122 103 0 3 chr17 21114025 21114316 -64324164 - AluSc SINE Alu -19 290 1 29 28 0 0 chr17 21115218 21115254 -64323226 + AT_rich Low_complexity Low_complexity 1 36 0 302 265 0 0 chr17 21115357 21115425 -64323055 - L2 LINE L2 -4 3268 3201 2073 98 18 0 chr17 21115454 21115740 -64322740 + AluY SINE Alu 1 291 -20 860 252 139 54 chr17 21115799 21116244 -64322236 - L2 LINE L2 -4 3309 2827 1490 153 81 0 chr17 21117028 21117310 -64321170 + AluJb SINE Alu 3 305 0 2230 90 0 13 chr17 21117363 21117674 -64320806 + AluSq SINE Alu 1 307 -6 295 258 79 0 chr17 21117777 21117866 -64320614 + MIR SINE MIR 167 262 0 742 187 8 15 chr17 21117896 21118030 -64320450 - FLAM_C SINE Alu 0 133 1 1324 184 0 107 chr17 21118510 21118847 -64319633 - AluJb SINE Alu -1 301 1 565 174 15 53 chr17 21118847 21118899 -64319581 - AluSp SINE Alu -183 130 84 1805 106 17 0 chr17 21119001 21119237 -64319243 - AluSp SINE Alu -73 240 1 1658 174 3 10 chr17 21119626 21119914 -64318566 - AluJo SINE Alu -4 308 23 1973 157 0 3 chr17 21121013 21121313 -64317167 + AluSx SINE Alu 1 299 -13 2116 118 28 0 chr17 21121313 21121602 -64316878 + AluSg SINE Alu 1 297 -13 2143 92 3 3 chr17 21121602 21121886 -64316594 + AluSp SINE Alu 21 304 -9 825 260 82 30 chr17 21122217 21122655 -64315825 - L2 LINE L2 -1 3312 2852 382 238 228 10 chr17 21122660 21122866 -64315614 - L2 LINE L2 -1054 2260 2010 1548 212 20 0 chr17 21123645 21123947 -64314533 - AluJo SINE Alu -4 308 1 336 272 25 0 chr17 21123983 21124064 -64314416 + AluJ/FLAM SINE Alu 1 83 -219 329 235 191 0 chr17 21124043 21124111 -64314369 - FRAM/FAM SINE Alu -92 83 3 * 2161 70 52 0 chr17 21124282 21124575 -64313905 - AluSp SINE Alu 0 307 1 1970 169 0 0 chr17 21124594 21124901 -64313579 - AluSx SINE Alu -5 307 1 1240 129 0 0 chr17 21125014 21125185 -64313295 - AluSg/x SINE Alu -10 300 130 1946 102 26 0 chr17 21125192 21125457 -64313023 - AluSx SINE Alu -12 300 29 1899 178 3 0 chr17 21125570 21125874 -64312606 + AluJo SINE Alu 1 305 -7 445 174 96 0 chr17 21126488 21126604 -64311876 - L1 LINE L1 -2195 3951 3805 1877 96 82 34 chr17 21126734 21127026 -64311454 - AluSg SINE Alu -4 306 1 2817 212 32 14 chr17 21127304 21127416 -64311064 + L1M4 LINE L1 2521 2630 -3516 2115 108 31 0 chr17 21127416 21127703 -64310777 + AluSx SINE Alu 2 297 -15 2817 212 32 14 chr17 21127703 21128316 -64310164 + L1M4 LINE L1 2630 3259 -2887 338 219 0 0 chr17 21128699 21128772 -64309708 + MIR SINE MIR 175 247 -15 249 143 159 32 chr17 21128978 21129041 -64309439 - MER57A LTR ERV1 -3 400 330 1471 137 61 6 chr17 21129068 21129377 -64309103 - LTR54 LTR ERV1 -134 376 1 296 294 23 0 chr17 21129873 21129976 -64308504 - MIR SINE MIR -48 160 55 212 292 101 11 chr17 21130233 21130322 -64308158 + MIR SINE MIR 16 112 -150 451 271 58 26 chr17 21130339 21130494 -64307986 - MIR SINE MIR -66 196 37 366 23 0 0 chr17 21130621 21130664 -64307816 + (CA)n Simple_repeat Simple_repeat 1 43 0 1806 184 23 20 chr17 21130665 21131012 -64307468 - MLT2C1 LTR ERVL -49 348 1 310 343 9 0 chr17 21131026 21131131 -64307349 + L2 LINE L2 3197 3302 -11 21 0 0 0 chr17 21132060 21132081 -64306399 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr17 21132222 21132246 -64306234 + (CA)n Simple_repeat Simple_repeat 2 25 0 240 290 0 0 chr17 21132246 21132308 -64306172 + L2 LINE L2 2864 2925 -347 2732 42 0 0 chr17 21132395 21132701 -64305779 + AluY SINE Alu 1 306 -5 2293 96 13 0 chr17 21132707 21133010 -64305470 + AluSx SINE Alu 1 307 -5 2089 109 20 3 chr17 21133010 21133303 -64305177 + AluSx SINE Alu 1 298 -14 1078 138 6 0 chr17 21133395 21133555 -64304925 - AluSx SINE Alu -151 161 1 423 339 18 4 chr17 21133671 21133898 -64304582 - L1M4 LINE L1 -1093 5053 4824 271 305 93 7 chr17 21134024 21134175 -64304305 - L1M4 LINE L1 -1021 5125 4962 687 272 30 41 chr17 21134246 21134595 -64303885 + MLT1I LTR MaLR 60 450 0 269 299 23 11 chr17 21134628 21134802 -64303678 - L1M4 LINE L1 -1231 4915 4740 2310 95 3 3 chr17 21134802 21135097 -64303383 - AluY SINE Alu -16 295 1 705 272 177 15 chr17 21135107 21135643 -64302837 - L1M4 LINE L1 -1497 4649 4027 520 323 6 12 chr17 21135764 21135928 -64302552 + L1MEc LINE L1 148 310 -6086 779 315 83 15 chr17 21135929 21136338 -64302142 + L3 LINE CR1 1130 1566 -11 2398 64 7 3 chr17 21136400 21136697 -64301783 - AluY SINE Alu -13 298 1 21 0 0 0 chr17 21136786 21136807 -64301673 + AT_rich Low_complexity Low_complexity 1 21 0 2239 174 21 28 chr17 21136837 21137273 -64301207 - Tigger2a DNA MER2_type 0 434 2 1595 179 34 10 chr17 21137382 21137678 -64300802 + AluJo SINE Alu 1 303 -9 201 269 0 0 chr17 21137946 21137998 -64300482 - MER91B DNA MER1_type -60 130 79 1839 154 3 39 chr17 21138395 21138707 -64299773 + AluJo SINE Alu 1 301 -11 408 245 69 73 chr17 21139343 21139576 -64298904 - HAL1b LINE L1 -451 897 666 542 242 78 0 chr17 21139607 21139760 -64298720 - HAL1b LINE L1 -783 565 401 335 287 93 28 chr17 21139807 21140054 -64298426 - HAL1b LINE L1 -1024 324 62 194 272 206 22 chr17 21140103 21140283 -64298197 - L2 LINE L2 -63 3250 3038 1114 72 0 0 chr17 21140950 21141089 -64297391 - MER85 DNA T2_type 0 139 1 2420 85 0 3 chr17 21141099 21141405 -64297075 + AluY SINE Alu 6 310 -1 1185 174 82 0 chr17 21142353 21142560 -64295920 + MER58A DNA MER1_type 1 224 0 379 154 0 64 chr17 21143015 21143093 -64295387 + L2 LINE L2 3198 3270 -2 2299 107 0 0 chr17 21143743 21144041 -64294439 - AluY SINE Alu -13 298 1 2625 39 13 0 chr17 21144232 21144537 -64293943 - AluY SINE Alu -2 309 1 888 281 126 52 chr17 21146276 21146644 -64291836 + MLT1J LTR MaLR 1 413 -98 2086 123 10 7 chr17 21146644 21146936 -64291544 - AluSq SINE Alu -19 294 2 888 281 126 52 chr17 21146936 21147043 -64291437 + MLT1J LTR MaLR 413 511 0 1407 241 73 14 chr17 21147220 21147725 -64290755 - MLT1G1 LTR MaLR -12 578 1 2251 110 3 0 chr17 21147860 21148160 -64290320 - AluSp SINE Alu -12 301 1 465 19 0 0 chr17 21148234 21148288 -64290192 + (TG)n Simple_repeat Simple_repeat 2 55 0 208 237 99 84 chr17 21148370 21148501 -64289979 - MIR SINE MIR -55 207 75 297 200 80 40 chr17 21148535 21148610 -64289870 + MLT1J2 LTR MaLR 67 144 -306 427 269 42 17 chr17 21148612 21148731 -64289749 + MER20B DNA MER1_type 120 241 -542 1852 251 49 19 chr17 21148762 21149292 -64289188 + MER90 LTR ERV1 69 614 0 1096 247 84 38 chr17 21149350 21149800 -64288680 + MER20B DNA MER1_type 312 782 -1 3844 227 84 29 chr17 21150108 21151800 -64286680 + L1M4 LINE L1 14 1612 -5213 1754 170 35 0 chr17 21151800 21152082 -64286398 + AluJb SINE Alu 5 296 -16 3844 227 84 29 chr17 21152082 21152740 -64285740 + L1M4 LINE L1 1612 2233 -4592 2168 108 7 10 chr17 21152740 21153037 -64285443 + AluSx SINE Alu 1 296 -16 3844 227 84 29 chr17 21153037 21153235 -64285245 + L1M4 LINE L1 2233 2936 -3889 1575 169 29 38 chr17 21153628 21153941 -64284539 + AluJb SINE Alu 1 310 -2 542 149 93 0 chr17 21153973 21154080 -64284400 - AluSg/x SINE Alu 0 312 196 2426 86 3 0 chr17 21154094 21154398 -64284082 - AluSp SINE Alu -8 305 1 939 154 0 0 chr17 21154398 21154534 -64283946 - AluSq/x SINE Alu -176 136 1 413 219 53 18 chr17 21154615 21154729 -64283751 - HsTC2 DNA Tc2 -4 1894 1777 254 128 0 0 chr17 21154733 21154772 -64283708 - HsTC2 DNA Tc2 -595 1303 1265 273 247 14 0 chr17 21154780 21154853 -64283627 - HsTC2 DNA Tc2 -1204 694 621 2461 64 0 10 chr17 21154871 21155169 -64283311 - AluY SINE Alu -16 295 1 1156 196 85 91 chr17 21155169 21155435 -64283045 - HsTC2 DNA Tc2 -1331 567 302 2371 93 6 3 chr17 21155435 21155747 -64282733 - AluSp SINE Alu 0 313 1 1156 196 85 91 chr17 21155747 21155822 -64282658 - HsTC2 DNA Tc2 -1596 302 228 1283 136 48 19 chr17 21155834 21156040 -64282440 - AluSx SINE Alu -100 212 1 318 295 108 35 chr17 21156093 21156351 -64282129 - L1MEd LINE L1 -4969 1150 874 7170 59 6 48 chr17 21156351 21157719 -64280761 - SVA Other Other -520 1386 433 21 0 0 0 chr17 21158210 21158231 -64280249 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 21159004 21159027 -64279453 + AT_rich Low_complexity Low_complexity 1 23 0 2463 97 0 0 chr17 21159027 21159338 -64279142 - AluSp SINE Alu -2 311 1 738 151 7 50 chr17 21159340 21159479 -64279001 - AluJo SINE Alu -178 134 2 904 161 32 63 chr17 21160443 21160740 -64277740 - L1MB5 LINE L1 -6 6666 6361 2148 127 0 0 chr17 21160740 21161023 -64277457 - AluSg SINE Alu -27 283 1 904 161 32 63 chr17 21161023 21161460 -64277020 - L1MB5 LINE L1 -311 6361 5890 574 130 0 22 chr17 21161460 21161552 -64276928 - FLAM_A SINE Alu -10 132 43 378 0 0 0 chr17 21161557 21161599 -64276881 + (TG)n Simple_repeat Simple_repeat 2 43 0 1261 68 0 0 chr17 21161598 21161770 -64276710 - AluSx SINE Alu 0 305 134 1268 182 42 29 chr17 21161770 21162018 -64276462 - L1MB5 LINE L1 -747 5897 5643 1978 73 23 8 chr17 21162018 21162279 -64276201 - AluSg SINE Alu -5 305 41 1268 182 42 29 chr17 21162279 21162337 -64276143 - L1MB5 LINE L1 -1001 5643 5587 1547 190 0 0 chr17 21162343 21162590 -64275890 + AluJb SINE Alu 1 247 -65 936 118 14 35 chr17 21162590 21162734 -64275746 - AluSx SINE Alu -172 141 1 1709 124 80 29 chr17 21162742 21163017 -64275463 - AluSq SINE Alu -18 295 7 2258 100 3 7 chr17 21163030 21163329 -64275151 - AluSp SINE Alu -15 298 1 1338 181 38 52 chr17 21163331 21163350 -64275130 - L1MB5 LINE L1 -1390 5254 5236 2291 92 3 23 chr17 21163350 21163654 -64274826 - AluSg1 SINE Alu -11 298 1 1338 181 38 52 chr17 21163654 21163953 -64274527 - L1MB5 LINE L1 -1408 5236 4939 1415 172 67 50 chr17 21163953 21164250 -64274230 - AluJo SINE Alu -10 302 1 1338 181 38 52 chr17 21164250 21164295 -64274185 - L1MB5 LINE L1 -1705 4939 4895 646 200 39 0 chr17 21164299 21164454 -64274026 - L1MB5 LINE L1 -5303 1239 1079 27 49 0 0 chr17 21164458 21164499 -64273981 + AT_rich Low_complexity Low_complexity 1 41 0 2209 124 0 3 chr17 21164499 21164798 -64273682 - AluSx SINE Alu -14 298 1 610 224 9 9 chr17 21164825 21164941 -64273539 - FLAM_C SINE Alu -26 117 2 2054 189 32 18 chr17 21164941 21165381 -64273099 - L1MB5 LINE L1 -5445 1097 652 1249 118 0 0 chr17 21165539 21165709 -64272771 + AluSg/x SINE Alu 141 310 0 297 246 0 0 chr17 21165755 21165820 -64272660 - MLT1L LTR MaLR -5 610 546 462 306 128 19 chr17 21165927 21166192 -64272288 - MLT1L LTR MaLR -317 298 5 706 259 155 0 chr17 21166265 21166458 -64272022 - MER58A DNA MER1_type 0 224 2 2345 74 0 13 chr17 21168378 21168688 -64269792 - AluY SINE Alu -5 306 1 518 269 9 0 chr17 21168704 21168812 -64269668 - FAM SINE Alu -76 109 1 2652 178 17 50 chr17 21169173 21169753 -64268727 - MER68 LTR ERV1 -1 561 1 23 0 0 0 chr17 21169789 21169812 -64268668 + AT_rich Low_complexity Low_complexity 1 23 0 2073 167 19 19 chr17 21170338 21170752 -64267728 - L1MC1 LINE L1 -14 6319 5906 538 153 0 0 chr17 21171735 21171820 -64266660 - Tigger7 DNA MER2_type 0 2587 2503 22 0 0 0 chr17 21172541 21172563 -64265917 + AT_rich Low_complexity Low_complexity 1 22 0 373 211 0 0 chr17 21172564 21172659 -64265821 - Charlie1 DNA MER1_type -45 2716 2622 2406 62 3 0 chr17 21172668 21172976 -64265504 + AluY SINE Alu 1 309 -2 557 235 129 0 chr17 21173021 21173191 -64265289 - Charlie1 DNA MER1_type -2562 199 8 2539 54 0 0 chr17 21173317 21173615 -64264865 + AluY SINE Alu 1 298 -13 23 54 0 0 chr17 21173855 21173892 -64264588 + AT_rich Low_complexity Low_complexity 1 37 0 2110 119 0 10 chr17 21174952 21175246 -64263234 + AluSg SINE Alu 16 306 -4 224 200 22 0 chr17 21175819 21175864 -64262616 + L2 LINE L2 3263 3308 -5 28 29 0 0 chr17 21176084 21176119 -64262361 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 21176811 21176839 -64261641 + AT_rich Low_complexity Low_complexity 1 28 0 2223 123 0 19 chr17 21179204 21179528 -64258952 + 7SLRNA srpRNA srpRNA 3 320 0 27 0 0 0 chr17 21180617 21180644 -64257836 + AT_rich Low_complexity Low_complexity 1 27 0 2245 119 10 0 chr17 21180983 21181293 -64257187 + AluSp SINE Alu 1 313 0 384 284 94 24 chr17 21181386 21181640 -64256840 + L1MC2 LINE L1 5388 5659 -462 238 198 35 23 chr17 21181726 21181812 -64256668 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 288 277 0 0 chr17 21182275 21182340 -64256140 - MER58A DNA MER1_type 0 224 160 280 348 11 0 chr17 21182346 21182435 -64256045 - MER58A DNA MER1_type -17 90 1 2890 284 91 20 chr17 21183007 21184057 -64254423 + L2 LINE L2 1778 2901 -413 632 296 154 46 chr17 21184083 21184536 -64253944 + L2 LINE L2 2806 3307 -6 237 65 0 0 chr17 21184592 21184623 -64253857 + (A)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr17 21185505 21185532 -64252948 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2362 42 42 0 chr17 21186100 21186386 -64252094 - AluY SINE Alu -13 298 1 2244 90 20 0 chr17 21186391 21186692 -64251788 - AluSx SINE Alu -5 307 1 2395 77 0 16 chr17 21186696 21187008 -64251472 - AluSq SINE Alu -6 307 1 1086 155 0 12 chr17 21187582 21187750 -64250730 + FRAM SINE Alu 1 166 0 299 145 0 48 chr17 21187790 21187852 -64250628 - L1M4 LINE L1 -884 5262 5204 2215 120 3 3 chr17 21188000 21188308 -64250172 + AluSx SINE Alu 2 309 -3 606 197 57 0 chr17 21188430 21188598 -64249882 - AluY SINE Alu 0 328 154 1296 119 0 6 chr17 21188683 21188859 -64249621 - AluJb SINE Alu -137 175 1 1106 157 0 0 chr17 21238881 21239047 -64199433 + AluSg/x SINE Alu 130 295 -17 2971 179 24 8 chr17 21239047 21239632 -64198848 + L1MC2 LINE L1 5742 6335 -9 1389 181 126 4 chr17 21239634 21239783 -64198697 - AluJb SINE Alu -9 303 174 240 35 0 0 chr17 21239783 21239812 -64198668 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1389 181 126 4 chr17 21239812 21239932 -64198548 - AluJb SINE Alu -138 174 1 185 156 0 44 chr17 21239971 21240016 -64198464 + CT-rich Low_complexity Low_complexity 3 45 0 1855 145 3 3 chr17 21240752 21241054 -64197426 - AluJo SINE Alu 0 302 1 419 241 90 28 chr17 21241054 21241266 -64197214 + MER113 DNA MER1_type? 121 345 -176 2664 45 0 6 chr17 21241508 21241821 -64196659 - AluY SINE Alu 0 311 1 272 250 56 56 chr17 21242016 21242095 -64196385 + MER20B DNA MER1_type 674 755 -28 2350 100 0 7 chr17 21242095 21242396 -64196084 + AluSx SINE Alu 1 299 -13 272 250 56 56 chr17 21242396 21242424 -64196056 + MER20B DNA MER1_type 754 781 -2 2106 144 0 0 chr17 21242491 21242803 -64195677 + AluSx SINE Alu 1 312 0 357 200 0 0 chr17 21242803 21242873 -64195607 + L1M4 LINE L1 5049 5118 -1028 1972 149 7 3 chr17 21242966 21243261 -64195219 + AluSx SINE Alu 1 296 -16 395 157 0 0 chr17 21243262 21243332 -64195148 + L1M4 LINE L1 5362 5431 -753 1817 145 13 44 chr17 21243764 21244081 -64194399 - AluJb SINE Alu -5 307 1 197 269 185 76 chr17 21244836 21244955 -64193525 - MIR3 SINE MIR -37 171 40 1925 135 48 0 chr17 21245215 21245504 -64192976 - AluSx SINE Alu -9 303 1 2372 97 0 13 chr17 21245511 21245820 -64192660 - AluSx SINE Alu -7 305 1 2656 106 3 13 chr17 21246002 21246381 -64192099 - THE1C LTR MaLR 0 375 1 210 37 0 0 chr17 21246948 21246975 -64191505 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1797 141 14 40 chr17 21247339 21247636 -64190844 - AluJb SINE Alu -10 302 14 257 301 54 0 chr17 21247964 21248057 -64190423 + MER94 DNA DNA 2 99 -35 210 250 83 0 chr17 21248348 21248396 -64190084 - L2 LINE L2 -14 3258 3207 319 356 17 8 chr17 21248528 21248646 -64189834 + MIR3 SINE MIR 70 188 -20 2090 197 101 32 chr17 21248650 21249157 -64189323 - MLT1F LTR MaLR 0 542 1 1944 139 9 22 chr17 21249629 21249945 -64188535 - AluSx SINE Alu 0 312 1 269 128 0 0 chr17 21250195 21250234 -64188246 + Alu SINE Alu 6 44 -258 2277 86 0 43 chr17 21250555 21250880 -64187600 + AluY SINE Alu 1 311 0 700 101 16 78 chr17 21250884 21251013 -64187467 - FLAM_C SINE Alu -21 122 2 288 307 117 22 chr17 21251015 21251152 -64187328 - MIR SINE MIR -68 194 45 194 211 0 0 chr17 21251573 21251611 -64186869 + MIR SINE MIR 108 145 -117 2381 93 0 17 chr17 21251893 21252193 -64186287 + AluSg SINE Alu 1 295 -15 1116 159 59 44 chr17 21252323 21252594 -64185886 - L1MB7 LINE L1 -16 6168 5894 2582 64 0 0 chr17 21252595 21252906 -64185574 + AluY SINE Alu 1 311 0 629 160 48 0 chr17 21252906 21253031 -64185449 - L1MB7 LINE L1 -475 5709 5579 253 204 0 0 chr17 21254161 21254205 -64184275 + L2 LINE L2 3251 3294 -19 204 133 17 96 chr17 21254999 21255051 -64183429 - MIR SINE MIR -65 143 91 267 253 46 11 chr17 21255274 21255361 -64183119 - L2 LINE L2 -36 3236 3147 1592 182 64 0 chr17 21255592 21255872 -64182608 + AluJo SINE Alu 1 298 -14 2458 66 3 10 chr17 21256355 21256657 -64181823 - AluY SINE Alu -11 300 1 335 312 39 13 chr17 21257012 21257166 -64181314 - L2 LINE L2 -215 3057 2900 263 248 184 28 chr17 21257503 21257644 -64180836 + MER5B DNA MER1_type 21 172 -6 22 56 0 0 chr17 21258056 21258092 -64180388 + AT_rich Low_complexity Low_complexity 1 36 0 1734 137 61 4 chr17 21258473 21258736 -64179744 - AluJb SINE Alu -34 278 1 1996 146 13 3 chr17 21258897 21259199 -64179281 + AluSx SINE Alu 8 312 0 268 184 0 40 chr17 21259201 21259277 -64179203 + GA-rich Low_complexity Low_complexity 3 75 0 2265 102 3 0 chr17 21259311 21259604 -64178876 + AluSx SINE Alu 15 308 -4 437 33 0 17 chr17 21260461 21260521 -64177959 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 218 208 0 75 chr17 21260548 21260601 -64177879 + MER5B DNA MER1_type 1 49 -129 21 0 0 0 chr17 21260601 21260622 -64177858 + AT_rich Low_complexity Low_complexity 1 21 0 1144 179 71 17 chr17 21260794 21261030 -64177450 + L1MB5 LINE L1 5893 6131 -52 1633 164 3 38 chr17 21261030 21261323 -64177157 + AluJb SINE Alu 1 283 -29 1144 179 71 17 chr17 21261323 21261378 -64177102 + L1MB5 LINE L1 6131 6182 -1 326 190 150 10 chr17 21261449 21261549 -64176931 + L1MC5 LINE L1 7691 7804 -157 2208 147 0 11 chr17 21261890 21262251 -64176229 + MER46B DNA MER2_type 5 236 0 1944 119 0 0 chr17 21262297 21262549 -64175931 + AluSx SINE Alu 1 252 -60 187 292 62 15 chr17 21262761 21262826 -64175654 + L2 LINE L2 417 484 -2830 * 247 282 42 14 chr17 21262806 21262877 -64175603 + L2 LINE L2 3194 3266 -6 408 319 28 6 chr17 21263338 21263520 -64174960 - Charlie8 DNA MER1_type -2141 276 91 1537 194 74 62 chr17 21263529 21263635 -64174845 + MLT1D LTR MaLR 13 116 -389 2209 104 0 7 chr17 21263635 21263934 -64174546 + AluSx SINE Alu 1 297 -15 1537 194 74 62 chr17 21263934 21264312 -64174168 + MLT1D LTR MaLR 116 503 -2 192 262 0 0 chr17 21264422 21264464 -64174016 + L2 LINE L2 3199 3240 -32 348 266 89 13 chr17 21265005 21265163 -64173317 + L2 LINE L2 2893 3062 -210 348 43 0 0 chr17 21265588 21265634 -64172846 + (TTAA)n Simple_repeat Simple_repeat 1 46 0 194 226 0 75 chr17 21265661 21265714 -64172766 + MER5B DNA MER1_type 1 49 -129 21 0 0 0 chr17 21265714 21265735 -64172745 + AT_rich Low_complexity Low_complexity 1 21 0 1627 181 7 11 chr17 21265782 21266063 -64172417 - AluJo SINE Alu -22 290 11 2573 72 0 0 chr17 21266080 21266387 -64172093 - AluY SINE Alu -4 307 1 272 254 9 146 chr17 21266395 21266455 -64172025 - MER5B DNA MER1_type -83 95 55 828 188 0 0 chr17 21266455 21266588 -64171892 + FLAM_A SINE Alu 1 133 0 272 254 9 146 chr17 21266588 21266637 -64171843 - MER5B DNA MER1_type -123 55 1 2139 119 10 3 chr17 21267674 21267968 -64170512 - AluSx SINE Alu -16 296 1 401 235 17 61 chr17 21268430 21268545 -64169935 + MIR3 SINE MIR 94 203 -5 2593 66 0 0 chr17 21269459 21269762 -64168718 - AluY SINE Alu -8 303 1 263 212 61 71 chr17 21270188 21270287 -64168193 + L2 LINE L2 3144 3241 -31 1086 340 88 69 chr17 21270802 21271685 -64166795 - L1MC4a LINE L1 -1644 6164 5265 403 294 68 0 chr17 21271935 21272081 -64166399 - MLT1I LTR MaLR -8 401 246 201 74 0 0 chr17 21272092 21272119 -64166361 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2238 111 3 0 chr17 21272131 21272420 -64166060 + AluSx SINE Alu 1 290 -22 2264 87 3 11 chr17 21272422 21272732 -64165748 + AluSp SINE Alu 1 308 0 505 115 29 29 chr17 21272776 21272880 -64165600 - L1MB8 LINE L1 -100 6078 5975 2057 190 47 2 chr17 21272893 21273320 -64165160 - L1MB7 LINE L1 -104 6080 5635 325 303 115 0 chr17 21273394 21273516 -64164964 - MLT1I LTR MaLR -256 153 18 227 246 0 43 chr17 21274158 21274227 -64164253 - MER5A DNA MER1_type -110 79 14 338 318 148 40 chr17 21275279 21275603 -64162877 - MLT1K LTR MaLR -90 498 140 1819 142 6 77 chr17 21276129 21276440 -64162040 - AluJb SINE Alu -23 289 1 2168 133 3 0 chr17 21277049 21277358 -64161122 + AluSq SINE Alu 3 312 -1 1751 57 0 9 chr17 21277719 21277929 -64160551 + AluY SINE Alu 1 208 -103 963 144 6 44 chr17 21278421 21278581 -64159899 - FRAM SINE Alu -21 155 2 22 0 0 0 chr17 21278627 21278649 -64159831 + AT_rich Low_complexity Low_complexity 1 22 0 401 350 45 22 chr17 21278658 21278948 -64159532 + L1ME3A LINE L1 5609 5910 -252 747 296 10 5 chr17 21280062 21280268 -64158212 + MIR SINE MIR 8 214 -48 207 175 0 0 chr17 21281144 21281184 -64157296 - MIR SINE MIR -14 248 209 763 148 0 0 chr17 21283448 21283563 -64154917 - FLAM_C SINE Alu -18 115 1 2678 82 3 0 chr17 21283572 21283926 -64154554 - THE1A LTR MaLR 0 355 1 1803 164 41 0 chr17 21283932 21284224 -64154256 - AluSx SINE Alu -8 304 1 2432 77 10 0 chr17 21284724 21285021 -64153459 - AluY SINE Alu -10 301 2 2135 147 0 6 chr17 21285113 21285426 -64153054 - AluSx SINE Alu -1 311 1 3448 159 138 21 chr17 21285932 21286703 -64151777 - MER21B LTR ERV1 0 863 3 192 250 0 0 chr17 21287169 21287213 -64151267 + L2 LINE L2 3143 3186 -86 214 273 156 0 chr17 21287225 21287302 -64151178 - L2 LINE L2 0 3272 3184 26 30 0 0 chr17 21287743 21287776 -64150704 + AT_rich Low_complexity Low_complexity 1 33 0 462 204 136 10 chr17 21287776 21287879 -64150601 - FLAM_C SINE Alu -25 118 3 589 266 229 8 chr17 21293562 21293916 -64144564 - L2 LINE L2 -18 3295 2864 190 214 0 71 chr17 21294147 21294203 -64144277 - L2 LINE L2 -509 2805 2754 949 271 87 28 chr17 21294241 21294362 -64144118 - L2 LINE L2 -656 2658 2546 2668 65 0 0 chr17 21294362 21294671 -64143809 - AluY SINE Alu -2 309 1 949 271 87 28 chr17 21294671 21294985 -64143495 - L2 LINE L2 -768 2546 2197 2141 117 23 3 chr17 21295013 21295312 -64143168 - AluSx SINE Alu -7 305 1 211 298 48 0 chr17 21295474 21295558 -64142922 - MIR SINE MIR -72 136 49 282 56 0 0 chr17 21295992 21296028 -64142452 + (A)n Simple_repeat Simple_repeat 1 36 0 2518 52 23 10 chr17 21296724 21297034 -64141446 - AluYb8 SINE Alu -4 314 1 2146 102 38 7 chr17 21298391 21298684 -64139796 + AluSq SINE Alu 1 302 -11 1539 161 0 97 chr17 21298687 21298998 -64139482 - AluJb SINE Alu -31 281 1 2268 106 3 10 chr17 21299103 21299406 -64139074 + AluSx SINE Alu 1 301 -11 1815 178 0 10 chr17 21299433 21299731 -64138749 + AluJo SINE Alu 1 295 -17 202 239 28 56 chr17 21300024 21300095 -64138385 + MER5B DNA MER1_type 50 118 -60 392 306 98 16 chr17 21300353 21300546 -64137934 + L2 LINE L2 3102 3310 -3 1458 130 8 71 chr17 21300574 21300640 -64137840 + AluSq SINE Alu 61 130 -178 252 0 0 0 chr17 21300640 21300668 -64137812 + (CA)n Simple_repeat Simple_repeat 2 29 0 1458 130 8 71 chr17 21300668 21300864 -64137616 + AluSq SINE Alu 130 308 0 209 217 29 58 chr17 21301058 21301127 -64137353 + MER5B DNA MER1_type 50 116 -62 2386 95 0 13 chr17 21301452 21301757 -64136723 - AluSx SINE Alu -11 301 1 508 308 100 54 chr17 21301766 21301907 -64136573 - L1ME4a LINE L1 -5 6116 5983 1739 175 13 7 chr17 21301907 21302215 -64136265 - AluJo SINE Alu -2 310 1 508 308 100 54 chr17 21302215 21302404 -64136076 - L1ME4a LINE L1 -138 5983 5771 2236 90 45 0 chr17 21303191 21303480 -64135000 - AluSg SINE Alu -8 302 1 2060 138 0 25 chr17 21303491 21303809 -64134671 - AluSx SINE Alu -2 310 1 747 213 0 18 chr17 21303811 21303975 -64134505 - FRAM SINE Alu -5 161 1 309 344 38 0 chr17 21303997 21304154 -64134326 + MIR SINE MIR 88 250 -12 397 240 61 87 chr17 21304185 21304414 -64134066 - L1ME4a LINE L1 -382 5739 5517 2060 157 93 21 chr17 21305404 21305729 -64132751 - LTR47A LTR ERVL -1 451 88 2488 63 10 3 chr17 21305729 21306030 -64132450 - AluSq SINE Alu -9 304 2 2060 157 93 21 chr17 21306030 21306125 -64132355 - LTR47A LTR ERVL -364 88 1 219 336 47 35 chr17 21306128 21306398 -64132082 - L2 LINE L2 -23 3249 2907 757 181 145 108 chr17 21306436 21306686 -64131794 - MLT1C LTR MaLR -185 205 2 257 271 0 0 chr17 21306788 21306847 -64131633 + L2 LINE L2 2531 2589 -725 260 189 19 19 chr17 21307118 21307171 -64131309 + L2 LINE L2 3171 3223 -90 193 211 88 0 chr17 21307417 21307474 -64131006 + MIR SINE MIR 78 139 -69 308 268 72 0 chr17 21307554 21307651 -64130829 - MIR SINE MIR -70 192 89 3186 86 12 7 chr17 21307676 21308108 -64130372 + MER1A DNA MER1_type 96 529 0 289 278 44 11 chr17 21308115 21308205 -64130275 - MIR SINE MIR -168 94 2 245 246 49 84 chr17 21308438 21308580 -64129900 - L1MC4 LINE L1 -142 7900 7764 2223 107 0 0 chr17 21309127 21309430 -64129050 + AluSg SINE Alu 3 305 0 219 326 32 21 chr17 21310001 21310096 -64128384 - MIR SINE MIR -112 150 55 2043 139 7 19 chr17 21310424 21310734 -64127746 - AluSx SINE Alu -6 306 1 1979 103 0 97 chr17 21312620 21312949 -64125531 - AluSx SINE Alu -15 297 1 2165 119 3 0 chr17 21313384 21313679 -64124801 - AluSq SINE Alu -16 297 2 2221 77 49 7 chr17 21314457 21314743 -64123737 - AluSc SINE Alu -11 298 1 200 0 100 0 chr17 21315837 21315867 -64122613 + T-rich Low_complexity Low_complexity 3 35 0 2336 112 0 0 chr17 21315879 21316191 -64122289 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 21316649 21316670 -64121810 + AT_rich Low_complexity Low_complexity 1 21 0 622 215 0 0 chr17 21316670 21316791 -64121689 + 7SLRNA srpRNA srpRNA 200 320 0 38 0 0 0 chr17 21316798 21316836 -64121644 + AT_rich Low_complexity Low_complexity 1 38 0 302 263 50 40 chr17 21316950 21317049 -64121431 + L1ME4a LINE L1 6016 6115 -6 329 296 25 50 chr17 21317649 21317808 -64120672 + MIR SINE MIR 102 256 -6 2025 159 88 14 chr17 21320780 21320805 -64117675 - L1MB7 LINE L1 -20 6164 6142 2150 112 20 0 chr17 21320805 21321100 -64117380 - AluSx SINE Alu -11 301 1 2025 159 88 14 chr17 21321100 21321496 -64116984 - L1MB7 LINE L1 -42 6142 5712 364 271 66 26 chr17 21321501 21321652 -64116828 - Charlie8 DNA MER1_type -2259 158 2 278 260 130 42 chr17 21321855 21322047 -64116433 - L1ME4a LINE L1 -81 6040 5832 2497 77 0 10 chr17 21323583 21323895 -64114585 + AluSc SINE Alu 1 309 0 2179 116 7 3 chr17 21324253 21324546 -64113934 + AluSx SINE Alu 1 294 -18 2223 95 0 36 chr17 21324663 21324969 -64113511 - AluSg SINE Alu -15 295 1 2157 109 17 0 chr17 21324974 21325268 -64113212 - AluSq SINE Alu 0 313 15 441 205 114 48 chr17 21325832 21325998 -64112482 + MER5B DNA MER1_type 1 177 -1 190 358 92 17 chr17 21326251 21326371 -64112109 - L2 LINE L2 -5 3308 3180 1518 149 0 0 chr17 21327877 21328098 -64110382 + AluJo SINE Alu 81 301 -11 701 284 60 44 chr17 21328681 21329329 -64109151 + L1ME3A LINE L1 1358 2012 -4516 * 2139 266 96 64 chr17 21329324 21329688 -64108792 + L1ME3A LINE L1 2842 3193 -3233 2201 113 3 0 chr17 21329688 21329972 -64108508 - AluSp SINE Alu -28 285 1 2139 266 96 64 chr17 21329972 21331675 -64106805 + L1ME3A LINE L1 3193 4975 -1451 2598 65 0 3 chr17 21331741 21332048 -64106432 + AluY SINE Alu 1 306 -5 694 296 65 37 chr17 21332207 21332558 -64105922 + L1ME3A LINE L1 5602 5962 -492 455 259 15 8 chr17 21332600 21332731 -64105749 + L1ME3A LINE L1 6091 6222 -228 1819 147 11 11 chr17 21332736 21333022 -64105458 + AluJb SINE Alu 6 291 -21 221 267 0 17 chr17 21333025 21333085 -64105395 + (CATATA)n Simple_repeat Simple_repeat 4 62 0 1500 129 4 33 chr17 21336059 21336299 -64102181 + AluJo SINE Alu 6 238 -74 215 0 67 0 chr17 21336332 21336362 -64102118 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 508 258 19 7 chr17 21336520 21336675 -64101805 - L1ME LINE L1 -371 5750 5594 256 354 37 19 chr17 21337976 21338137 -64100343 + L2 LINE L2 2887 3050 -222 229 288 45 0 chr17 21338779 21338845 -64099635 + MER103 DNA DNA 16 84 -82 306 256 26 60 chr17 21338994 21339111 -64099369 + MIR SINE MIR 35 147 -115 305 250 25 67 chr17 21339109 21339229 -64099251 - L2 LINE L2 0 3272 3158 * 244 250 0 0 chr17 21343007 21343055 -64095425 - MLT1J2 LTR MaLR -139 311 264 558 287 207 0 chr17 21343956 21344280 -64094200 + MLT1G1 LTR MaLR 205 595 0 402 259 42 0 chr17 21345121 21345264 -64093216 - MLT1J1 LTR MaLR -277 169 21 1155 77 0 0 chr17 21345504 21345647 -64092833 - AluSg/x SINE Alu -21 291 149 1552 108 0 43 chr17 21345647 21345878 -64092602 + AluSg/x SINE Alu 84 304 -8 361 255 27 40 chr17 21346035 21346184 -64092296 + L1MC5 LINE L1 7782 7928 -33 329 283 183 26 chr17 21346791 21347173 -64091307 - L2 LINE L2 -2157 1157 716 384 243 178 30 chr17 21347174 21347376 -64091104 - L2 LINE L2 -2854 460 229 232 169 0 0 chr17 21348596 21348638 -64089842 + MIR SINE MIR 113 153 -109 219 341 11 11 chr17 21350368 21350456 -64088024 - L2 LINE L2 -573 2741 2654 406 215 125 69 chr17 21350456 21350600 -64087880 + MLT1D LTR MaLR 5 156 -349 716 206 96 27 chr17 21350619 21350838 -64087642 + MLT1D LTR MaLR 272 505 0 214 271 155 43 chr17 21351732 21351939 -64086541 + L2 LINE L2 2813 3042 -271 270 244 39 5 chr17 21353555 21353651 -64084829 + MIR SINE MIR 90 254 -8 1093 310 158 25 chr17 21353779 21354418 -64084062 - L1ME3A LINE L1 -219 5951 5148 2147 123 13 28 chr17 21354418 21354735 -64083745 - AluJo SINE Alu 0 312 1 1093 310 158 25 chr17 21354735 21355027 -64083453 - L1ME3A LINE L1 -1022 5148 4896 1303 48 0 0 chr17 21355030 21355177 -64083303 + AluY SINE Alu 147 293 -18 1543 132 4 18 chr17 21355182 21355317 -64083163 + AluSx SINE Alu 1 133 -179 2330 110 10 0 chr17 21355317 21355625 -64082855 + AluSx SINE Alu 1 311 -1 1543 132 4 18 chr17 21355625 21355717 -64082763 + AluSx SINE Alu 133 225 -87 1546 232 102 95 chr17 21355724 21355888 -64082592 - L1ME3A LINE L1 -2089 4057 3896 2337 115 0 0 chr17 21355888 21356193 -64082287 - AluSx SINE Alu -7 305 1 1546 232 102 95 chr17 21356193 21356227 -64082253 - L1ME3A LINE L1 -2250 3896 3864 550 144 183 0 chr17 21356227 21356331 -64082149 - FLAM_C SINE Alu -10 123 1 1546 232 102 95 chr17 21356331 21356933 -64081547 - L1ME3A LINE L1 -2282 3864 3268 2024 169 0 0 chr17 21356933 21357240 -64081240 - AluJo SINE Alu -5 307 1 1546 232 102 95 chr17 21357240 21357402 -64081078 - L1ME3A LINE L1 -2878 3268 3109 2010 118 3 57 chr17 21357402 21357569 -64080911 - AluSq SINE Alu -15 298 154 2308 76 55 0 chr17 21357569 21357860 -64080620 - AluSp SINE Alu -6 307 1 2010 118 3 57 chr17 21357860 21358007 -64080473 - AluSq SINE Alu -159 154 1 2202 121 7 3 chr17 21358007 21358313 -64080167 - AluSg SINE Alu -3 307 1 1546 232 102 95 chr17 21358313 21358350 -64080130 - L1ME3A LINE L1 -3036 3110 3047 526 239 27 38 chr17 21358691 21358763 -64079717 + MER5A DNA MER1_type 5 76 -113 2076 119 6 48 chr17 21358763 21358908 -64079572 + AluSx SINE Alu 2 129 -183 2564 49 7 7 chr17 21358908 21359216 -64079264 + AluY SINE Alu 1 308 -3 2076 119 6 48 chr17 21359216 21359381 -64079099 + AluSx SINE Alu 129 299 -13 526 239 27 38 chr17 21359381 21359492 -64078988 + MER5A DNA MER1_type 76 186 -3 231 268 110 0 chr17 21359507 21359589 -64078891 - MIR SINE MIR -95 167 77 1801 142 62 17 chr17 21360159 21360447 -64078033 - AluSx SINE Alu -11 301 1 267 272 191 17 chr17 21360697 21360858 -64077622 + MIR SINE MIR 15 196 -66 2529 73 0 10 chr17 21360997 21361300 -64077180 - AluSc SINE Alu -8 301 2 379 198 0 25 chr17 21361530 21361611 -64076869 + MIR SINE MIR 71 149 -113 229 323 104 0 chr17 21361724 21361820 -64076660 - L2 LINE L2 -13 3259 3154 2271 108 3 3 chr17 21362058 21362353 -64076127 + AluSx SINE Alu 1 295 -17 2415 66 13 13 chr17 21363152 21363456 -64075024 + AluSx SINE Alu 1 304 -8 412 204 31 10 chr17 21363925 21364023 -64074457 + MIR SINE MIR 37 136 -72 1930 259 49 8 chr17 21365629 21366242 -64072238 + L1ME1 LINE L1 2318 2955 -3191 1972 94 13 82 chr17 21366242 21366560 -64071920 + AluSx SINE Alu 1 296 -16 189 107 0 0 chr17 21367267 21367295 -64071185 + (TTTCC)n Simple_repeat Simple_repeat 3 30 0 379 179 114 0 chr17 21367386 21367526 -64070954 + L1ME1 LINE L1 3126 3281 -2865 * 2271 236 50 43 chr17 21367524 21367628 -64070852 + L1ME1 LINE L1 5479 5581 -585 2435 70 0 10 chr17 21367628 21367930 -64070550 - AluY SINE Alu -12 299 1 2271 236 50 43 chr17 21367930 21368033 -64070447 + L1ME1 LINE L1 5581 5682 -484 1849 116 60 0 chr17 21368033 21368307 -64070173 + AluSx SINE Alu 25 313 0 2271 236 50 43 chr17 21368307 21368523 -64069957 + L1ME1 LINE L1 5682 5895 -271 2108 139 0 16 chr17 21368523 21368832 -64069648 + AluSx SINE Alu 1 304 -8 2271 236 50 43 chr17 21368832 21369084 -64069396 + L1ME1 LINE L1 5895 6162 -4 435 322 80 67 chr17 21369783 21370156 -64068324 + L1ME4a LINE L1 5527 5904 -217 1360 185 80 74 chr17 21370162 21370286 -64068194 - MLT1A1 LTR MaLR 0 365 243 2470 80 3 0 chr17 21370286 21370587 -64067893 + AluSp SINE Alu 1 302 -11 1360 185 80 74 chr17 21370587 21370825 -64067655 - MLT1A1 LTR MaLR -122 243 1 3136 208 87 124 chr17 21370825 21371139 -64067341 - MLT1A1-int LTR MaLR 0 1735 1411 519 186 0 0 chr17 21371139 21371225 -64067255 + AluJ/FLAM SINE Alu 2 87 -225 3136 208 87 124 chr17 21371225 21371924 -64066556 - MLT1A1-int LTR MaLR -324 1411 688 2147 135 20 0 chr17 21371924 21372228 -64066252 - AluJb SINE Alu -2 310 1 3136 208 87 124 chr17 21372228 21372279 -64066201 - MLT1A1-int LTR MaLR -1047 688 637 2177 117 0 23 chr17 21372279 21372588 -64065892 + AluSc SINE Alu 1 302 -7 3136 208 87 124 chr17 21372588 21372628 -64065852 - MLT1A1-int LTR MaLR -1098 637 597 1928 149 3 16 chr17 21372628 21372944 -64065536 - AluJo SINE Alu 0 312 1 3136 208 87 124 chr17 21372944 21373086 -64065394 - MLT1A1-int LTR MaLR -1138 597 450 2142 138 0 3 chr17 21373114 21373411 -64065069 - AluSx SINE Alu -16 296 1 2126 146 0 3 chr17 21373411 21373712 -64064768 - AluJb SINE Alu -12 300 1 1171 181 39 24 chr17 21373712 21373806 -64064674 - MLT1A1-int LTR MaLR -1477 258 167 1808 175 26 79 chr17 21373806 21374209 -64064271 - MSTB1 LTR MaLR 0 432 54 2270 92 10 3 chr17 21374209 21374504 -64063976 - AluSx SINE Alu -15 297 1 1808 175 26 79 chr17 21374504 21374556 -64063924 - MSTB1 LTR MaLR -378 54 1 1171 181 39 24 chr17 21374556 21374715 -64063765 - MLT1A1-int LTR MaLR -1568 167 1 1892 159 50 31 chr17 21374715 21374763 -64063717 - MLT1A1 LTR MaLR 0 365 319 2460 79 0 20 chr17 21374763 21375068 -64063412 - AluSp SINE Alu -14 299 1 1892 159 50 31 chr17 21375068 21375377 -64063103 - MLT1A1 LTR MaLR -46 319 1 1093 116 79 195 chr17 21375781 21376099 -64062381 - AluJo SINE Alu -12 300 20 243 171 0 0 chr17 21376364 21376405 -64062075 - MER34C LTR ERV1 -484 101 61 226 246 15 31 chr17 21376595 21376660 -64061820 + MIR SINE MIR 42 105 -157 959 227 106 0 chr17 21377101 21377374 -64061106 + MER33 DNA MER1_type 1 302 -22 1740 159 14 37 chr17 21377465 21377608 -64060872 + AluJo SINE Alu 1 135 -177 2237 112 0 3 chr17 21377608 21377902 -64060578 + AluSg SINE Alu 1 293 -17 1740 159 14 37 chr17 21377902 21378054 -64060426 + AluJo SINE Alu 135 289 -23 227 252 215 56 chr17 21378086 21378234 -64060246 - MIR SINE MIR -65 143 8 233 277 31 0 chr17 21378694 21378759 -64059721 + MIR3 SINE MIR 114 180 -28 826 141 16 0 chr17 21379374 21379495 -64058985 - AluJb SINE Alu -12 300 178 397 321 107 7 chr17 21379499 21379770 -64058710 - L1ME4a LINE L1 -294 5827 5530 229 264 0 0 chr17 21379888 21379941 -64058539 - L1MC4 LINE L1 -385 7657 7605 829 249 20 10 chr17 21379942 21380139 -64058341 + MER20 DNA MER1_type 1 199 -20 3809 163 87 50 chr17 21380201 21381050 -64057430 - L1MB5 LINE L1 -6 6168 5272 2031 148 0 16 chr17 21381050 21381360 -64057120 - AluJb SINE Alu -7 305 1 3809 163 87 50 chr17 21381360 21381456 -64057024 - L1MB5 LINE L1 -902 5272 5181 1569 226 48 10 chr17 21381441 21381461 -64057019 - L1MB5 LINE L1 -1734 4412 4394 * 2344 86 0 52 chr17 21381461 21381786 -64056694 - AluY SINE Alu -2 309 2 1569 226 48 10 chr17 21381786 21382244 -64056236 - L1MB5 LINE L1 -1752 4394 3916 198 0 0 0 chr17 21382417 21382439 -64056041 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 2203 101 7 0 chr17 21382444 21382721 -64055759 - AluSx SINE Alu -33 279 1 2114 136 3 3 chr17 21382868 21383169 -64055311 + AluJb SINE Alu 1 301 -11 2313 119 0 0 chr17 21383219 21383522 -64054958 + AluSx SINE Alu 1 303 -9 447 290 236 3 chr17 21383799 21384168 -64054312 - L1ME3A LINE L1 -223 5947 5493 2271 66 45 0 chr17 21384211 21384497 -64053983 + AluY SINE Alu 1 299 -12 342 0 0 0 chr17 21384618 21384656 -64053824 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2347 89 0 7 chr17 21384659 21384952 -64053528 - AluSg SINE Alu -19 291 1 549 246 66 6 chr17 21384961 21385144 -64053336 - L1MD2 LINE L1 -1 6358 6165 309 82 0 0 chr17 21385152 21385201 -64053279 + (TG)n Simple_repeat Simple_repeat 1 49 0 2495 189 58 14 chr17 21385202 21385339 -64053141 - L1MD2 LINE L1 -233 6126 5996 1372 179 110 71 chr17 21385339 21385720 -64052760 - MSTD LTR MaLR 0 396 1 2495 189 58 14 chr17 21385720 21386136 -64052344 - L1MD2 LINE L1 -363 5996 5549 1887 150 3 17 chr17 21386176 21386470 -64052010 - AluJb SINE Alu -22 290 1 24 53 0 0 chr17 21386650 21386688 -64051792 + AT_rich Low_complexity Low_complexity 1 38 0 265 246 9 45 chr17 21386722 21386832 -64051648 - L1ME4a LINE L1 -25 6096 5991 2220 102 0 3 chr17 21387461 21387778 -64050702 + AluSx SINE Alu 1 316 0 3151 182 32 24 chr17 21387778 21388455 -64050025 - L1MB7 LINE L1 -61 6123 5441 2216 82 0 7 chr17 21388477 21388783 -64049697 + AluY SINE Alu 1 304 0 2905 10 0 0 chr17 21390015 21390322 -64048158 - AluYa5 SINE Alu -4 307 1 860 107 0 0 chr17 21392201 21392313 -64046167 + AluSg/x SINE Alu 177 288 -22 366 180 0 0 chr17 21392372 21392433 -64046047 + AluSc SINE Alu 230 290 -9 2515 191 111 49 chr17 21392474 21392910 -64045570 + L1MB5 LINE L1 4462 4870 -1276 2194 110 0 58 chr17 21392910 21393237 -64045243 - AluSx SINE Alu -4 308 1 2515 191 111 49 chr17 21393237 21393583 -64044897 + L1MB5 LINE L1 4870 5193 -953 2016 154 0 3 chr17 21393583 21393876 -64044604 - AluJb SINE Alu -20 292 1 213 39 0 0 chr17 21393885 21393911 -64044569 + (TA)n Simple_repeat Simple_repeat 2 27 0 2434 82 0 0 chr17 21393912 21394206 -64044274 - AluSg SINE Alu -16 294 1 2515 191 111 49 chr17 21394206 21394264 -64044216 + L1MB5 LINE L1 5199 5368 -778 1773 174 43 0 chr17 21394274 21394573 -64043907 + AluSx SINE Alu 1 312 0 495 179 17 60 chr17 21394580 21394738 -64043742 + L1MB5 LINE L1 5339 5500 -666 864 156 0 7 chr17 21394745 21394880 -64043600 + FLAM_A SINE Alu 8 141 -1 2166 190 37 61 chr17 21394880 21395167 -64043313 + L1MB5 LINE L1 5496 5788 -392 1743 151 4 22 chr17 21395167 21395463 -64043017 + AluSx SINE Alu 19 309 0 2166 190 37 61 chr17 21395463 21395694 -64042786 + L1MB5 LINE L1 5788 6023 -157 1993 110 107 19 chr17 21395694 21396004 -64042476 - MER1B DNA MER1_type 0 337 1 2166 190 37 61 chr17 21396004 21396037 -64042443 + L1MB5 LINE L1 6023 6055 -125 2239 129 0 3 chr17 21396037 21396339 -64042141 - AluSg SINE Alu -9 301 1 2166 190 37 61 chr17 21396339 21396460 -64042020 + L1MB5 LINE L1 6055 6122 -58 2115 138 7 0 chr17 21396460 21396764 -64041716 - AluJb SINE Alu -6 306 1 2166 190 37 61 chr17 21396764 21396807 -64041673 + L1MB5 LINE L1 6122 6165 -15 6751 137 114 100 chr17 21396819 21397728 -64040752 + L1MCa LINE L1 30 924 -5502 2267 123 0 0 chr17 21397728 21398030 -64040450 - AluSx SINE Alu -10 302 1 2137 123 3 10 chr17 21398040 21398340 -64040140 - AluSx SINE Alu -14 298 1 6751 137 114 100 chr17 21398340 21398564 -64039916 + L1MCa LINE L1 932 1151 -5275 2340 107 0 0 chr17 21398564 21398862 -64039618 - AluSx SINE Alu -14 298 1 6751 137 114 100 chr17 21398862 21399481 -64038999 + L1MCa LINE L1 1151 1825 -4601 2021 141 3 19 chr17 21399481 21399793 -64038687 - AluJb SINE Alu -5 307 1 6751 137 114 100 chr17 21399793 21399883 -64038597 + L1MCa LINE L1 1825 1912 -4514 1933 67 0 28 chr17 21399942 21400195 -64038285 - AluY SINE Alu -21 290 45 739 125 0 31 chr17 21400234 21400362 -64038118 + AluSp/q SINE Alu 189 312 -1 3273 171 51 48 chr17 21400376 21400735 -64037745 + L1MC1 LINE L1 4802 5158 -1175 1818 164 0 26 chr17 21400735 21401045 -64037435 + AluJb SINE Alu 1 302 -10 3273 171 51 48 chr17 21401045 21401156 -64037324 + L1MC1 LINE L1 5158 5267 -1066 2163 122 0 25 chr17 21401156 21401475 -64037005 + AluY SINE Alu 1 311 0 3273 171 51 48 chr17 21401475 21401741 -64036739 + L1MC1 LINE L1 5267 5531 -802 2050 95 18 21 chr17 21401741 21402055 -64036425 - AluSx SINE Alu 0 313 1 185 0 40 0 chr17 21402057 21402082 -64036398 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2139 120 3 0 chr17 21402082 21402366 -64036114 - AluSx SINE Alu -27 285 1 3273 171 51 48 chr17 21402366 21403129 -64035351 + L1MC1 LINE L1 5530 6244 -89 715 154 0 64 chr17 21403133 21403289 -64035191 + L1P2 LINE L1 5342 5487 -667 1217 182 5 14 chr17 21403291 21403505 -64034975 + AluJb SINE Alu 86 297 -15 933 177 44 2 chr17 21403507 21403706 -64034774 + L1MB4 LINE L1 5485 5687 -481 1620 168 69 14 chr17 21403727 21404018 -64034462 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr17 21404020 21404046 -64034434 + AT_rich Low_complexity Low_complexity 1 26 0 1056 224 22 18 chr17 21404046 21404318 -64034162 + L1MB4 LINE L1 5661 5933 -247 2649 181 115 95 chr17 21404318 21405230 -64033250 - MER21A LTR ERV1 0 931 2 658 226 31 67 chr17 21405250 21405400 -64033080 + L1MB5 LINE L1 5897 6045 -129 2443 108 0 0 chr17 21405400 21405707 -64032773 + AluSx SINE Alu 1 307 -5 658 226 31 67 chr17 21405707 21405825 -64032655 + L1MB5 LINE L1 6045 6166 -8 273 310 142 0 chr17 21406027 21406140 -64032340 - L2 LINE L2 -171 3101 2973 480 311 7 12 chr17 21406686 21406851 -64031629 + MIR SINE MIR 2 163 -45 1878 143 48 17 chr17 21407392 21407686 -64030794 + AluJb SINE Alu 1 303 -9 351 282 80 0 chr17 21407802 21407965 -64030515 - L1MC4a LINE L1 -1911 5897 5722 2053 140 3 13 chr17 21409104 21409418 -64029062 - AluSx SINE Alu -1 311 1 281 336 44 0 chr17 21410881 21410994 -64027486 + MIR3 SINE MIR 52 169 -39 265 200 30 130 chr17 21411115 21411215 -64027265 + MER5A DNA MER1_type 70 159 -30 2300 98 10 13 chr17 21411564 21411871 -64026609 - AluSg SINE Alu -4 306 1 208 259 0 0 chr17 21411934 21411988 -64026492 + MIR SINE MIR 93 146 -62 212 244 0 0 chr17 21412066 21412107 -64026373 + (TGG)n Simple_repeat Simple_repeat 3 43 0 1094 202 15 0 chr17 21412161 21412364 -64026116 + MER46A DNA MER2_type 31 236 0 319 212 176 0 chr17 21412400 21412485 -64025995 + MIR SINE MIR 33 132 -76 2208 82 9 48 chr17 21413227 21413543 -64024937 + AluSq SINE Alu 1 304 -9 383 229 203 0 chr17 21413730 21413848 -64024632 + MIR SINE MIR 46 187 -75 262 240 0 0 chr17 21414044 21414094 -64024386 - MER91 DNA MER1_type -90 50 1 716 197 24 0 chr17 21414213 21414340 -64024140 + FLAM_A SINE Alu 2 131 -2 2431 60 3 0 chr17 21414342 21414672 -64023808 + AluSp SINE Alu 1 331 0 2082 156 3 0 chr17 21414883 21415191 -64023289 - AluJb SINE Alu -1 311 3 507 294 15 50 chr17 21415268 21415322 -64023158 - MIR SINE MIR -47 215 161 1855 121 8 4 chr17 21415322 21415586 -64022894 + AluSx SINE Alu 39 303 -9 507 294 15 50 chr17 21415586 21415732 -64022748 - MIR SINE MIR -101 161 22 2899 153 55 76 chr17 21415820 21415872 -64022608 - L1MB5 LINE L1 0 6174 6122 217 0 61 0 chr17 21415872 21415905 -64022575 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 2326 52 11 0 chr17 21415905 21416176 -64022304 - AluSc SINE Alu -30 279 6 2899 153 55 76 chr17 21416176 21416491 -64021989 - L1MB5 LINE L1 -51 6123 5824 1593 181 39 0 chr17 21416491 21416773 -64021707 - AluJb SINE Alu -15 297 5 2899 153 55 76 chr17 21416773 21417078 -64021402 - L1MB5 LINE L1 -350 5824 5514 233 333 56 0 chr17 21417858 21417966 -64020514 - MIR3 SINE MIR -87 121 8 211 279 107 55 chr17 21418499 21418771 -64019709 + L2 LINE L2 2459 2744 -570 463 229 19 19 chr17 21419129 21419234 -64019246 - MIR3 SINE MIR -27 181 77 503 299 57 0 chr17 21419566 21419723 -64018757 - MIR3 SINE MIR -16 192 27 189 343 29 66 chr17 21419760 21419897 -64018583 + MIR SINE MIR 50 181 -81 202 298 88 61 chr17 21420535 21420716 -64017764 - L2 LINE L2 -40 3232 3047 1427 145 31 4 chr17 21421354 21421581 -64016899 + AluSx SINE Alu 1 233 -79 327 213 246 8 chr17 21421626 21421748 -64016732 - MIR3 SINE MIR -24 184 34 715 177 63 7 chr17 21422288 21422505 -64015975 + L2 LINE L2 2784 3016 -297 557 240 0 32 chr17 21422676 21422830 -64015650 - MER58B DNA MER1_type 0 341 193 184 195 49 0 chr17 21422861 21422902 -64015578 - MIR SINE MIR -3 259 217 * 191 231 0 0 chr17 21422869 21422908 -64015572 - L2 LINE L2 -19 3253 3215 1744 81 0 5 chr17 21423278 21423500 -64014980 + AluSx SINE Alu 1 221 -91 203 328 92 0 chr17 21423598 21423717 -64014763 - L2 LINE L2 -728 2586 2457 287 363 9 18 chr17 21424285 21424398 -64014082 + MIR SINE MIR 70 181 -81 196 333 14 0 chr17 21424825 21424894 -64013586 + MIR3 SINE MIR 90 159 -49 2218 69 49 0 chr17 21424899 21425187 -64013293 + AluSx SINE Alu 1 302 -10 305 313 9 18 chr17 21425355 21425467 -64013013 - MIR SINE MIR -116 146 36 201 158 26 0 chr17 21425755 21425793 -64012687 + GA-rich Low_complexity Low_complexity 1 39 0 209 255 19 85 chr17 21425865 21425971 -64012509 - L2 LINE L2 -304 2968 2870 288 316 103 7 chr17 21426126 21426262 -64012218 + MIR3 SINE MIR 60 208 0 211 209 105 35 chr17 21427351 21427437 -64011043 - MIR SINE MIR -60 148 57 275 247 41 0 chr17 21428339 21428412 -64010068 + L3 LINE CR1 1413 1488 -89 454 305 53 7 chr17 21430236 21430387 -64008093 + MIR SINE MIR 25 182 -80 2310 68 0 23 chr17 21430998 21431305 -64007175 + AluY SINE Alu 1 300 -11 209 121 0 0 chr17 21431342 21431375 -64007105 + MIR SINE MIR 114 146 -62 1977 112 3 41 chr17 21432119 21432291 -64006189 - AluSx SINE Alu -16 296 138 2305 92 0 22 chr17 21432291 21432608 -64005872 - AluSg SINE Alu 0 310 1 1977 112 3 41 chr17 21432608 21432729 -64005751 - AluSx SINE Alu -174 138 14 288 318 0 36 chr17 21432846 21432956 -64005524 + MIR3 SINE MIR 93 198 -10 198 209 141 18 chr17 21433153 21433231 -64005249 - MIR SINE MIR -56 152 90 312 255 43 21 chr17 21433577 21433671 -64004809 - MIR3 SINE MIR -53 155 60 2315 70 0 17 chr17 21433825 21434127 -64004353 + AluSp SINE Alu 1 297 -16 534 121 71 30 chr17 21434213 21434312 -64004168 + L1MB8 LINE L1 6076 6178 0 2319 48 7 7 chr17 21434324 21434614 -64003866 + AluY SINE Alu 1 290 -21 220 195 35 138 chr17 21434629 21434716 -64003764 - MIR3 SINE MIR -6 202 125 304 238 12 25 chr17 21435604 21435684 -64002796 + MIR SINE MIR 68 146 -116 216 268 90 10 chr17 21439208 21439311 -63999169 - MER5A DNA MER1_type -47 131 25 * 229 346 43 43 chr17 21439265 21439453 -63999027 - L3 LINE CR1 -71 1506 1319 189 319 29 0 chr17 21440555 21440624 -63997856 + MIR SINE MIR 59 129 -79 223 200 33 17 chr17 21440925 21440985 -63997495 + MIR SINE MIR 90 150 -58 207 259 48 102 chr17 21441172 21441319 -63997161 + MIR3 SINE MIR 3 141 -67 * 306 352 28 42 chr17 21441287 21441429 -63997051 + MIR SINE MIR 109 248 -14 192 286 39 13 chr17 21441545 21441622 -63996858 - MIR SINE MIR -88 120 42 210 291 175 0 chr17 21441671 21441774 -63996706 - MIR SINE MIR -73 189 69 508 253 209 6 chr17 21442292 21442474 -63996006 - MER20 DNA MER1_type 0 219 1 2351 53 30 0 chr17 21442478 21442777 -63995703 + AluY SINE Alu 1 308 -3 426 267 67 18 chr17 21443643 21443788 -63994692 - MIR SINE MIR -62 146 41 230 293 110 61 chr17 21444386 21444550 -63993930 - MIR SINE MIR -51 211 40 299 309 65 22 chr17 21444840 21444979 -63993501 + MIR3 SINE MIR 50 194 -14 485 309 65 0 chr17 21445699 21445838 -63992642 + MIR SINE MIR 114 261 -1 307 259 99 15 chr17 21445950 21446081 -63992399 - MIR3 SINE MIR -65 143 2 578 302 22 16 chr17 21446203 21446385 -63992095 + L3 LINE CR1 1316 1498 -79 292 255 53 21 chr17 21446457 21446551 -63991929 + L3 LINE CR1 1416 1512 -65 234 329 0 25 chr17 21446540 21446619 -63991861 + L2 LINE L2 3196 3272 0 * 201 239 57 68 chr17 21447629 21447717 -63990763 - MIR SINE MIR -84 124 38 378 228 54 0 chr17 21447907 21447999 -63990481 + MIR SINE MIR 42 138 -70 201 294 35 24 chr17 21448199 21448284 -63990196 - MIR SINE MIR -118 144 59 378 329 146 0 chr17 21448447 21448666 -63989814 + L3 LINE CR1 1231 1481 -96 411 307 26 0 chr17 21449445 21449559 -63988921 - MIR SINE MIR -55 207 91 186 397 0 0 chr17 21449560 21449623 -63988857 + L2 LINE L2 3125 3187 -85 258 333 0 0 chr17 21449734 21449824 -63988656 + MIR3 SINE MIR 102 191 -17 195 305 0 0 chr17 21450700 21450759 -63987721 - MIR SINE MIR -61 147 89 341 273 61 0 chr17 21451082 21451181 -63987299 + MIR3 SINE MIR 88 192 -16 254 210 20 90 chr17 21452061 21452161 -63986319 + MIR3 SINE MIR 95 187 -21 418 230 248 0 chr17 21452175 21452336 -63986144 + MIR SINE MIR 11 211 -51 3687 256 73 40 chr17 21452561 21453151 -63985329 + L1MEc LINE L1 37 606 -5790 694 270 93 0 chr17 21453151 21453355 -63985125 - MER58A DNA MER1_type 0 224 2 3687 256 73 40 chr17 21453355 21454042 -63984438 + L1MEc LINE L1 606 1382 -5014 2230 115 0 0 chr17 21454042 21454346 -63984134 + AluSx SINE Alu 1 304 -8 3687 256 73 40 chr17 21454346 21454677 -63983803 + L1MEc LINE L1 1382 1700 -4696 468 280 51 17 chr17 21455294 21455469 -63983011 + MIR3 SINE MIR 25 205 -3 293 226 95 12 chr17 21456032 21456116 -63982364 - MIR SINE MIR -101 107 17 237 200 0 0 chr17 21456125 21456170 -63982310 - L3 LINE CR1 -109 1468 1424 363 298 53 72 chr17 21456249 21456457 -63982023 - MIR SINE MIR -12 250 47 222 200 226 0 chr17 21456712 21456798 -63981682 - MIR SINE MIR -115 147 37 302 316 17 42 chr17 21456835 21456980 -63981500 + MIR SINE MIR 38 183 -64 2349 92 0 0 chr17 21457415 21457718 -63980762 + AluSg SINE Alu 2 304 -6 509 276 47 75 chr17 21457841 21458055 -63980425 + MIR SINE MIR 40 247 -15 224 195 221 13 chr17 21458224 21458301 -63980179 + MIR3 SINE MIR 87 179 -29 440 339 94 0 chr17 21458714 21458885 -63979595 - MIR3 SINE MIR 0 208 22 231 298 120 38 chr17 21459416 21459574 -63978906 + MIR3 SINE MIR 19 189 -19 347 327 115 6 chr17 21459637 21459793 -63978687 + MIR3 SINE MIR 3 175 -33 186 280 108 65 chr17 21460306 21460399 -63978081 + MIR3 SINE MIR 89 185 -23 219 69 0 0 chr17 21460525 21460554 -63977926 + (TCC)n Simple_repeat Simple_repeat 2 30 0 195 333 90 62 chr17 21460563 21460707 -63977773 - MIR SINE MIR -55 207 60 253 242 0 15 chr17 21460979 21461045 -63977435 - MER117 DNA MER1_type -91 106 42 37 52 0 0 chr17 21462606 21462664 -63975816 + GC_rich Low_complexity Low_complexity 1 58 0 189 0 0 0 chr17 21462688 21462709 -63975771 + (CTGGGG)n Simple_repeat Simple_repeat 2 22 0 25 65 0 0 chr17 21463155 21463201 -63975279 + GC_rich Low_complexity Low_complexity 1 46 0 200 306 0 0 chr17 21463390 21463439 -63975041 - MIR SINE MIR -90 118 70 4281 173 50 32 chr17 21464539 21464647 -63973833 - L1MD2 LINE L1 -88 6271 6166 1517 123 60 96 chr17 21464647 21464949 -63973531 - AluJo SINE Alu -15 297 7 4281 173 50 32 chr17 21464949 21465813 -63972667 - L1MD2 LINE L1 -193 6166 5281 1257 176 0 9 chr17 21465814 21466035 -63972445 - AluJo SINE Alu -7 305 87 1386 235 0 26 chr17 21466037 21466255 -63972225 - L1MD2 LINE L1 -850 5296 5091 2274 206 15 13 chr17 21466255 21466715 -63971765 - MER65C LTR ERV1 0 461 1 1386 235 0 26 chr17 21466715 21466875 -63971605 - L1MD2 LINE L1 -1055 5091 4928 2339 71 0 0 chr17 21466918 21467214 -63971266 - AluY SINE Alu -14 297 2 1938 151 3 3 chr17 21467218 21467529 -63970951 - AluSx SINE Alu -1 311 1 1534 160 15 105 chr17 21467594 21467937 -63970543 - AluJb SINE Alu 0 312 1 197 195 40 121 chr17 21468344 21468493 -63969987 - L2 LINE L2 -292 2980 2844 691 351 34 37 chr17 21469433 21469843 -63968637 - L2 LINE L2 0 3272 2864 182 332 193 25 chr17 21470804 21471006 -63967474 - L2 LINE L2 -1 3312 3077 518 329 6 6 chr17 21472013 21472174 -63966306 + MIR SINE MIR 67 227 -35 340 264 19 0 chr17 21473015 21473113 -63965367 + MIR SINE MIR 64 165 -63 1458 88 5 51 chr17 21474295 21474465 -63964015 - L1PB1 LINE L1 -17 6134 5975 1950 125 35 0 chr17 21474465 21474754 -63963726 - AluSx SINE Alu -13 299 1 1458 88 5 51 chr17 21474754 21474800 -63963680 - L1PB1 LINE L1 -176 5975 5928 223 297 0 0 chr17 21475570 21475634 -63962846 + MIR SINE MIR 80 143 -119 258 401 154 7 chr17 21476742 21477014 -63961466 + L2 LINE L2 2961 3272 0 261 336 123 0 chr17 21477208 21477354 -63961126 - L2 LINE L2 -262 3010 2847 504 281 99 26 chr17 21477355 21477547 -63960933 - L2 LINE L2 0 3313 3108 208 114 0 68 chr17 21478516 21478560 -63959920 + (CCCCCA)n Simple_repeat Simple_repeat 4 44 0 202 244 106 65 chr17 21480220 21480343 -63958137 + MIR3 SINE MIR 14 141 -67 180 328 147 17 chr17 21480792 21480908 -63957572 + MIR3 SINE MIR 8 138 -70 306 239 91 0 chr17 21481053 21481141 -63957339 + MIR SINE MIR 45 140 -68 364 228 13 0 chr17 21482158 21482237 -63956243 + MIR SINE MIR 73 152 -110 377 250 154 0 chr17 21482302 21482406 -63956074 - L2 LINE L2 -1 3312 3193 319 215 63 0 chr17 21483015 21483094 -63955386 + MIR SINE MIR 50 133 -75 2417 77 0 3 chr17 21483596 21483908 -63954572 - AluY SINE Alu 0 311 1 2529 54 0 6 chr17 21484017 21484330 -63954150 - AluY SINE Alu 0 311 1 2163 69 34 10 chr17 21484658 21484949 -63953531 + AluY SINE Alu 1 298 -13 270 304 16 48 chr17 21485087 21485212 -63953268 - MIR SINE MIR -97 165 45 207 318 55 0 chr17 21485420 21485536 -63952944 + MIR SINE MIR 60 182 -61 369 0 0 0 chr17 21485901 21485942 -63952538 + (CA)n Simple_repeat Simple_repeat 1 41 0 1486 126 20 157 chr17 21486302 21486652 -63951828 - AluYb8 SINE Alu -16 302 1 257 347 123 6 chr17 21486670 21486840 -63951640 + L2 LINE L2 2923 3112 -160 205 175 25 0 chr17 21487757 21487797 -63950683 + L2 LINE L2 3214 3254 -18 330 26 0 0 chr17 21488644 21488683 -63949797 + (CAG)n Simple_repeat Simple_repeat 3 41 0 268 253 24 36 chr17 21488799 21488882 -63949598 + MIR3 SINE MIR 74 155 -53 398 273 43 29 chr17 21488976 21489115 -63949365 + MIR3 SINE MIR 5 145 -63 530 275 109 24 chr17 21489180 21489391 -63949089 + L2 LINE L2 3064 3292 -21 430 231 48 101 chr17 21490067 21490215 -63948265 - MIR SINE MIR -65 143 5 471 282 26 6 chr17 21490564 21490720 -63947760 + L2 LINE L2 2893 3051 -221 189 250 0 0 chr17 21491421 21491465 -63947015 - MIR SINE MIR -56 152 109 1880 176 126 8 chr17 21491615 21491996 -63946484 + MSTB LTR MaLR 1 426 0 2307 110 0 0 chr17 21492363 21492673 -63945807 - AluSx SINE Alu -2 310 1 809 270 131 29 chr17 21492890 21493545 -63944935 + L2 LINE L2 2539 3272 0 766 237 153 0 chr17 21493768 21493958 -63944522 - MIR SINE MIR -29 233 15 513 269 28 7 chr17 21494593 21494738 -63943742 - MIR SINE MIR -108 154 7 602 198 8 40 chr17 21494854 21494980 -63943500 + FLAM_A SINE Alu 3 124 -9 2212 84 3 3 chr17 21494987 21495285 -63943195 + AluY SINE Alu 1 298 -13 1930 102 7 62 chr17 21495288 21495592 -63942888 - AluSc SINE Alu -21 288 2 1937 162 64 9 chr17 21495891 21496237 -63942243 + MLT1A1 LTR MaLR 1 365 0 255 186 0 0 chr17 21496307 21496350 -63942130 - MIR3 SINE MIR -54 154 112 363 261 166 51 chr17 21496685 21496938 -63941542 + LTR16C LTR ERVL 204 485 -6 281 261 52 78 chr17 21497519 21497634 -63940846 - MIR3 SINE MIR -39 169 58 374 318 52 0 chr17 21497692 21497846 -63940634 + MIR SINE MIR 33 194 -68 245 290 65 36 chr17 21497881 21498019 -63940461 + L2 LINE L2 2949 3090 -182 234 273 34 11 chr17 21498746 21498834 -63939646 - MIR SINE MIR -146 116 27 386 264 61 18 chr17 21499161 21499324 -63939156 + L2 LINE L2 2884 3053 -219 288 248 89 30 chr17 21499863 21499964 -63938516 - MIR3 SINE MIR -54 154 48 21 0 0 0 chr17 21501047 21501068 -63937412 + GC_rich Low_complexity Low_complexity 1 21 0 300 296 78 0 chr17 21501137 21501252 -63937228 - MIR SINE MIR -76 186 63 2089 107 3 13 chr17 21501748 21502048 -63936432 + AluSx SINE Alu 1 297 -15 1956 65 0 4 chr17 21502346 21502592 -63935888 - AluSc SINE Alu 0 309 65 963 278 99 50 chr17 21502810 21503253 -63935227 - L2 LINE L2 -10 3303 2839 213 357 54 0 chr17 21503280 21503392 -63935088 - L2 LINE L2 -626 2688 2571 270 236 0 0 chr17 21504280 21504335 -63934145 + MIR SINE MIR 93 147 -115 281 270 27 0 chr17 21504477 21504551 -63933929 - MIR3 SINE MIR -44 164 89 202 200 0 25 chr17 21504857 21504937 -63933543 + CT-rich Low_complexity Low_complexity 1 78 0 532 269 15 13 chr17 21505004 21505157 -63933323 - MIR SINE MIR -44 164 48 334 349 47 8 chr17 21505922 21506051 -63932429 + L2 LINE L2 2906 3039 -233 1691 115 0 4 chr17 21506107 21506342 -63932138 + AluSx SINE Alu 1 234 -78 1027 136 0 12 chr17 21506349 21506511 -63931969 - AluJb SINE Alu -103 209 50 552 92 0 0 chr17 21506511 21506587 -63931893 + AluSx SINE Alu 229 304 -5 477 263 49 49 chr17 21506588 21506831 -63931649 + L1MC4a LINE L1 6353 6595 -1213 905 183 15 0 chr17 21506847 21507044 -63931436 - L1MC4 LINE L1 -958 7084 6885 803 117 0 0 chr17 21507045 21507156 -63931324 + AluSg/x SINE Alu 189 299 -13 255 242 158 21 chr17 21507569 21507664 -63930816 - MIR SINE MIR -146 116 9 2245 91 0 49 chr17 21507929 21508064 -63930416 + AluSq SINE Alu 1 141 -172 2258 94 3 0 chr17 21508064 21508352 -63930128 + AluSq SINE Alu 1 289 -24 2245 91 0 49 chr17 21508352 21508545 -63929935 + AluSq SINE Alu 141 313 0 1457 133 78 0 chr17 21508545 21508815 -63929665 - MER4B LTR ERV1 -317 293 3 494 231 41 0 chr17 21508923 21509044 -63929436 + MLT1D LTR MaLR 1 126 -379 585 138 0 0 chr17 21509195 21509275 -63929205 - AluSp/q SINE Alu -23 290 211 1232 144 51 0 chr17 21509275 21509470 -63929010 + AluSg/x SINE Alu 106 310 0 1624 176 7 29 chr17 21509490 21509796 -63928684 + AluJo SINE Alu 1 299 -13 3784 236 48 92 chr17 21509797 21510511 -63927969 + L1M4 LINE L1 137 881 -5995 1935 72 4 4 chr17 21510511 21510762 -63927718 - AluSq SINE Alu -62 251 1 3784 236 48 92 chr17 21510762 21511058 -63927422 + L1M4 LINE L1 881 1188 -5688 2258 95 0 25 chr17 21511058 21511375 -63927105 + AluSg1 SINE Alu 1 309 0 3784 236 48 92 chr17 21511375 21511917 -63926563 + L1M4 LINE L1 1188 1752 -5124 2135 102 0 46 chr17 21511917 21512240 -63926240 + AluSg SINE Alu 2 309 -1 3784 236 48 92 chr17 21512240 21512281 -63926199 + L1M4 LINE L1 1752 1633 -5243 1674 79 169 8 chr17 21512281 21512547 -63925933 + AluSg1 SINE Alu 1 309 0 3784 236 48 92 chr17 21512547 21512603 -63925877 + L1M4 LINE L1 1632 1689 -5187 250 246 0 0 chr17 21512579 21512648 -63925832 + L1M4 LINE L1 5430 5498 -1459 * 873 240 0 0 chr17 21512648 21512848 -63925632 + AluJb SINE Alu 113 312 0 1086 190 29 33 chr17 21512873 21513296 -63925184 + L1M4 LINE L1 5854 6282 -713 2262 94 0 16 chr17 21513543 21513851 -63924629 + AluSx SINE Alu 1 303 -9 2184 95 0 7 chr17 21514162 21514458 -63924022 + AluSc SINE Alu 1 294 -15 2330 75 3 0 chr17 21514474 21514768 -63923712 + AluSp SINE Alu 1 295 -18 818 125 0 0 chr17 21514798 21514910 -63923570 + AluJo SINE Alu 14 125 -187 2332 89 0 16 chr17 21514977 21515293 -63923187 + AluY SINE Alu 1 311 0 800 164 0 0 chr17 21515302 21515430 -63923050 + AluJo SINE Alu 130 257 -55 1132 235 67 28 chr17 21515470 21515751 -63922729 - L1MCa LINE L1 -3467 2959 2690 1803 143 30 10 chr17 21515751 21516052 -63922428 - AluSx SINE Alu -5 307 1 1132 235 67 28 chr17 21516052 21516395 -63922085 - L1MCa LINE L1 -3736 2690 2308 2061 131 30 0 chr17 21516422 21516720 -63921760 - AluSc SINE Alu -2 307 1 2088 113 0 19 chr17 21516724 21517043 -63921437 - AluSq SINE Alu 0 313 1 675 208 8 0 chr17 21517052 21517177 -63921303 - FLAM_A SINE Alu -7 126 1 606 148 52 0 chr17 21517178 21517293 -63921187 - L1MC/D LINE L1 -586 5758 5638 428 95 0 0 chr17 21517295 21517358 -63921122 + AluSp/q SINE Alu 244 306 -7 2067 124 7 0 chr17 21517362 21517652 -63920828 + AluSx SINE Alu 1 292 -20 247 208 0 0 chr17 21517652 21517700 -63920780 - MLT1B LTR MaLR -65 325 278 773 142 0 0 chr17 21517761 21517888 -63920592 - LOR1a LTR ERV1 0 497 371 1507 250 65 48 chr17 21517888 21518200 -63920280 + L1M4 LINE L1 3802 4107 -2039 2155 114 0 16 chr17 21518200 21518515 -63919965 - AluSg SINE Alu 0 310 1 1507 250 65 48 chr17 21518515 21518711 -63919769 + L1M4 LINE L1 4107 4323 -1823 1986 112 20 0 chr17 21518711 21519006 -63919474 - AluSq SINE Alu -12 301 1 1507 250 65 48 chr17 21519006 21519061 -63919419 + L1M4 LINE L1 4323 4376 -1770 1495 156 0 23 chr17 21519062 21519325 -63919155 + AluJb SINE Alu 2 258 -54 1885 146 30 35 chr17 21519325 21519695 -63918785 + L1MB4 LINE L1 5813 6180 0 1253 156 12 132 chr17 21519699 21520026 -63918454 - AluJo SINE Alu -12 290 3 1980 14 0 0 chr17 21520307 21520524 -63917956 + U3 snRNA snRNA 1 217 0 1452 128 22 25 chr17 21520814 21521088 -63917392 - AluSx SINE Alu -39 273 1 871 98 0 23 chr17 21521089 21521222 -63917258 - AluSq/x SINE Alu -182 130 1 350 111 42 0 chr17 21521223 21521295 -63917185 + MLT1B LTR MaLR 308 382 -8 801 159 80 0 chr17 21521295 21521458 -63917022 + L1ME3A LINE L1 5583 5758 -586 591 230 0 24 chr17 21521459 21521585 -63916895 + FLAM_A SINE Alu 1 123 -10 21 89 0 0 chr17 21521719 21521775 -63916705 + GC_rich Low_complexity Low_complexity 1 56 0 402 246 138 18 chr17 21522125 21522292 -63916188 + L1ME3A LINE L1 5984 6170 0 372 248 28 28 chr17 21522691 21522800 -63915680 + MIR3 SINE MIR 66 174 -34 553 247 16 6 chr17 21522844 21523026 -63915454 - L1 LINE L1 -2724 3422 3239 1057 216 5 10 chr17 21523435 21523643 -63914837 + MER3 DNA MER1_type 1 207 -2 2217 109 0 0 chr17 21523679 21523981 -63914499 - AluSg SINE Alu -7 303 2 181 280 20 0 chr17 21524004 21524054 -63914426 - MIR SINE MIR -65 143 93 245 264 69 0 chr17 21524369 21524441 -63914039 - MIR SINE MIR -70 192 116 349 274 29 0 chr17 21524929 21525031 -63913449 + MIR SINE MIR 70 174 -88 589 249 96 11 chr17 21525372 21525549 -63912931 - MIR SINE MIR -40 222 31 2001 116 13 17 chr17 21525555 21525719 -63912761 - AluSq SINE Alu -12 301 137 1792 119 45 14 chr17 21525719 21526029 -63912451 - AluSx SINE Alu 0 312 1 2001 116 13 17 chr17 21526029 21526166 -63912314 - AluSq SINE Alu -176 137 1 900 108 8 0 chr17 21526167 21526296 -63912184 - AluSq/x SINE Alu -183 130 1 249 33 0 0 chr17 21526299 21526329 -63912151 + (TG)n Simple_repeat Simple_repeat 1 30 0 1463 157 56 22 chr17 21526334 21526602 -63911878 - AluJb SINE Alu -30 282 6 492 212 38 53 chr17 21526671 21526803 -63911677 + MLT1K LTR MaLR 163 292 -296 2200 95 3 3 chr17 21526806 21527100 -63911380 + AluSq SINE Alu 1 294 -19 1147 101 24 24 chr17 21527101 21527270 -63911210 + AluSp SINE Alu 134 302 -11 656 211 144 39 chr17 21527272 21527480 -63911000 + MLT1K LTR MaLR 289 518 -70 2102 129 0 3 chr17 21527513 21527823 -63910657 + AluSc SINE Alu 1 309 0 1584 186 13 31 chr17 21527837 21528155 -63910325 + AluJb SINE Alu 1 312 0 301 268 160 28 chr17 21528161 21528374 -63910106 - MLT1L LTR MaLR -27 588 348 1946 106 0 0 chr17 21528405 21528659 -63909821 + AluSg SINE Alu 3 256 -54 1662 113 0 0 chr17 21528759 21528990 -63909490 - AluSg SINE Alu -79 231 1 378 164 82 119 chr17 21528995 21529129 -63909351 - MER53 DNA DNA -60 129 1 231 235 0 0 chr17 21529129 21529178 -63909302 + LTR16C LTR ERVL 105 153 -338 466 265 61 0 chr17 21529284 21529391 -63909089 + LTR16C LTR ERVL 352 470 -21 2086 103 0 10 chr17 21529391 21529683 -63908797 - AluSc SINE Alu -20 289 1 466 265 61 0 chr17 21529683 21529707 -63908773 + LTR16C LTR ERVL 470 491 0 460 327 119 0 chr17 21529805 21530007 -63908473 - MIR SINE MIR 0 262 37 2269 64 0 3 chr17 21530090 21530397 -63908083 - AluY SINE Alu 0 306 1 861 137 0 0 chr17 21530403 21530527 -63907953 - FRAM SINE Alu -20 156 33 274 264 199 26 chr17 21530582 21530857 -63907623 + L2 LINE L2 2780 3097 -175 388 259 15 30 chr17 21531000 21531131 -63907349 - L2 LINE L2 -12 3301 3173 368 277 100 42 chr17 21531247 21531312 -63907168 + L2 LINE L2 3029 3089 -224 2407 78 0 0 chr17 21531312 21531620 -63906860 - AluSx SINE Alu -4 308 1 2174 98 3 0 chr17 21531620 21531914 -63906566 - AluSp SINE Alu -17 296 1 368 277 100 42 chr17 21531914 21532107 -63906373 + L2 LINE L2 3088 3303 -10 284 350 24 8 chr17 21532112 21532235 -63906245 - MIR SINE MIR -65 143 19 418 288 88 0 chr17 21532515 21532675 -63905805 - L2 LINE L2 -177 3095 2922 1591 160 7 4 chr17 21532833 21533108 -63905372 + AluJo SINE Alu 28 303 -9 297 128 0 0 chr17 21533111 21533158 -63905322 + MSTB2 LTR MaLR 411 457 0 303 182 42 61 chr17 21533802 21534455 -63904025 + (TGGG)n Simple_repeat Simple_repeat 1 640 0 246 225 70 14 chr17 21534502 21534573 -63903907 + MIR3 SINE MIR 109 183 -25 497 275 31 12 chr17 21534730 21534890 -63903590 - MIR SINE MIR -26 236 74 669 247 12 29 chr17 21535156 21535326 -63903154 + MIR SINE MIR 46 212 -50 1001 105 0 33 chr17 21535374 21535526 -63902954 - AluSq/x SINE Alu -165 147 1 1720 161 25 0 chr17 21535527 21535812 -63902668 - AluJb SINE Alu -20 292 1 182 125 0 0 chr17 21535853 21535885 -63902595 + MIR SINE MIR 106 137 -125 267 213 14 15 chr17 21536205 21536272 -63902208 + MLT1H LTR MaLR 65 160 -273 442 208 62 84 chr17 21536414 21536584 -63901896 + MLT1H LTR MaLR 406 549 0 22 0 0 0 chr17 21536662 21536684 -63901796 + AT_rich Low_complexity Low_complexity 1 22 0 2316 74 6 13 chr17 21537118 21537429 -63901051 + AluSc SINE Alu 1 309 0 1816 122 51 14 chr17 21537450 21537746 -63900734 + AluSx SINE Alu 1 307 -5 2154 84 0 3 chr17 21537752 21538077 -63900403 + AluY SINE Alu 1 324 0 194 128 26 0 chr17 21538083 21538122 -63900358 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 1725 158 10 6 chr17 21538443 21538754 -63899726 - AluJo SINE Alu 0 312 1 1438 133 0 5 chr17 21539064 21539274 -63899206 - AluJb SINE Alu -34 278 70 2294 74 0 22 chr17 21539480 21539791 -63898689 + AluSq SINE Alu 1 304 -9 1082 156 0 6 chr17 21539791 21539970 -63898510 + AluSg/x SINE Alu 132 309 -1 1903 123 3 54 chr17 21540729 21541046 -63897434 + AluJo SINE Alu 1 301 -11 187 304 117 85 chr17 21541360 21541607 -63896873 - L2 LINE L2 -85 3187 2933 518 261 26 10 chr17 21541614 21541809 -63896671 + L1MEd LINE L1 871 1068 -5051 744 135 0 26 chr17 21541850 21542006 -63896474 + (GGA)n Simple_repeat Simple_repeat 3 154 0 287 299 35 0 chr17 21542393 21542480 -63896000 + Charlie8 DNA MER1_type 135 224 -2193 1439 155 23 111 chr17 21542481 21542704 -63895776 - AluJo SINE Alu 0 312 128 2275 98 10 0 chr17 21542704 21543010 -63895470 + AluSg SINE Alu 2 310 0 1439 155 23 111 chr17 21543010 21543128 -63895352 - AluJo SINE Alu -184 128 1 182 222 0 22 chr17 21543141 21543186 -63895294 + L2 LINE L2 2698 2741 -573 548 307 24 10 chr17 21543287 21543588 -63894892 - L1MEd LINE L1 -4896 1488 1175 630 142 0 28 chr17 21543588 21543729 -63894751 + (TCC)n Simple_repeat Simple_repeat 3 139 0 525 256 26 10 chr17 21543770 21543965 -63894515 - L1MEd LINE L1 -5051 1321 1124 187 304 117 85 chr17 21543972 21544219 -63894261 + L2 LINE L2 2933 3187 -85 1903 123 3 54 chr17 21544532 21544849 -63893631 - AluJo SINE Alu -11 301 1 1117 157 0 0 chr17 21545608 21545786 -63892694 - AluSg/x SINE Alu -1 311 134 1886 59 0 8 chr17 21545786 21546025 -63892455 - AluSc SINE Alu -8 301 65 910 278 99 50 chr17 21546243 21546686 -63891794 - L2 LINE L2 -10 3303 2839 261 236 0 0 chr17 21547714 21547769 -63890711 + MIR SINE MIR 94 148 -60 1164 139 6 0 chr17 21548063 21548236 -63890244 - AluSx SINE Alu -138 174 1 228 294 132 37 chr17 21548285 21548421 -63890059 - MIR SINE MIR -113 149 1 1442 119 0 47 chr17 21548657 21548892 -63889588 + AluSg/x SINE Alu 83 306 -6 2093 79 14 7 chr17 21549162 21549462 -63889018 - AluSx SINE Alu 0 304 3 1732 128 0 0 chr17 21549464 21549713 -63888767 - AluSx SINE Alu -8 304 56 2164 98 3 3 chr17 21549728 21550023 -63888457 - AluSx SINE Alu -17 295 1 1032 109 0 0 chr17 21550024 21550161 -63888319 - AluSq/x SINE Alu -175 137 1 2131 110 0 0 chr17 21550553 21550845 -63887635 + AluSx SINE Alu 1 292 -20 2300 39 14 0 chr17 21550847 21551153 -63887327 + AluY SINE Alu 1 310 0 1025 146 12 0 chr17 21551224 21551389 -63887091 - FRAM SINE Alu -4 172 6 2293 93 0 6 chr17 21551564 21551876 -63886604 + AluSg SINE Alu 1 310 0 1265 48 30 6 chr17 21551879 21552044 -63886436 + AluSq SINE Alu 1 169 -144 445 133 24 12 chr17 21552044 21552127 -63886353 - LTR25 LTR ERV1 -686 108 25 1059 61 0 0 chr17 21552141 21552273 -63886207 + AluSg/x SINE Alu 168 299 -13 1515 144 21 103 chr17 21552579 21552918 -63885562 + AluJb SINE Alu 1 311 -1 207 100 0 0 chr17 21552948 21552978 -63885502 + (GA)n Simple_repeat Simple_repeat 1 30 0 449 265 8 23 chr17 21553115 21553247 -63885233 + MIR SINE MIR 4 133 -129 276 276 26 0 chr17 21553689 21553765 -63884715 + CT-rich Low_complexity Low_complexity 3 80 0 440 327 62 64 chr17 21553971 21554408 -63884072 + L2 LINE L2 2837 3272 0 1655 157 27 33 chr17 21554429 21554550 -63883930 + AluJo SINE Alu 5 125 -187 234 0 0 0 chr17 21554550 21554576 -63883904 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1655 157 27 33 chr17 21554576 21554754 -63883726 + AluJo SINE Alu 125 302 -10 262 338 55 21 chr17 21554898 21555043 -63883437 + MIR SINE MIR 48 197 -65 600 295 145 9 chr17 21555194 21555519 -63882961 + L2 LINE L2 2944 3312 -1 200 297 63 9 chr17 21555902 21556013 -63882467 - MIR3 SINE MIR -82 126 10 275 284 46 17 chr17 21556311 21556453 -63882027 + MIR SINE MIR 25 173 -35 596 238 52 43 chr17 21556492 21556733 -63881747 - MIR SINE MIR 0 262 20 677 296 15 10 chr17 21556747 21556953 -63881527 - MIR SINE MIR -6 256 50 180 0 0 0 chr17 21557186 21557206 -63881274 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2165 95 20 0 chr17 21557210 21557506 -63880974 - AluY SINE Alu -9 302 1 2176 88 34 0 chr17 21557506 21557800 -63880680 - AluSx SINE Alu -6 306 1 391 271 86 29 chr17 21557808 21557948 -63880532 + MIR SINE MIR 49 196 -66 537 342 58 26 chr17 21558233 21558575 -63879905 + L2 LINE L2 2920 3272 0 481 285 165 66 chr17 21558578 21559002 -63879478 - LTR16C LTR ERVL 0 491 26 257 338 13 0 chr17 21559094 21559171 -63879309 + MIR3 SINE MIR 81 158 -50 233 296 136 0 chr17 21559594 21559682 -63878798 + MIR SINE MIR 52 151 -111 238 313 0 0 chr17 21559783 21559850 -63878630 + L2 LINE L2 3206 3272 0 262 246 14 0 chr17 21559865 21559934 -63878546 + L2 LINE L2 3000 3069 -203 213 227 31 41 chr17 21560200 21560297 -63878183 + (CGGG)n Simple_repeat Simple_repeat 4 99 0 245 320 141 6 chr17 21560614 21560770 -63877710 - L2 LINE L2 -173 3099 2923 1450 126 20 157 chr17 21560788 21561138 -63877342 + AluYb8 SINE Alu 1 302 -16 450 94 0 0 chr17 21561498 21561562 -63876918 + (TG)n Simple_repeat Simple_repeat 2 65 0 184 313 60 0 chr17 21561939 21562022 -63876458 - MIR SINE MIR -61 147 60 230 251 22 19 chr17 21562229 21562336 -63876144 + MIR SINE MIR 45 146 -62 2141 69 34 10 chr17 21562492 21562783 -63875697 - AluY SINE Alu -13 298 1 2441 55 7 7 chr17 21563110 21563420 -63875060 + AluY SINE Alu 1 310 -1 2446 68 0 6 chr17 21563531 21563842 -63874638 + AluSg1 SINE Alu 1 309 0 1994 139 0 3 chr17 21563963 21564258 -63874222 + AluSg SINE Alu 1 294 -16 2261 72 0 33 chr17 21564265 21564572 -63873908 + AluSx SINE Alu 1 297 -15 558 167 208 17 chr17 21564616 21564736 -63873744 + FLAM_C SINE Alu 1 143 0 1767 102 0 0 chr17 21564869 21565104 -63873376 - AluSx SINE Alu -45 267 33 1955 117 7 17 chr17 21565225 21565525 -63872955 + AluSq SINE Alu 1 297 -16 2172 108 3 6 chr17 21565528 21565842 -63872638 + AluSp SINE Alu 1 313 0 650 210 36 31 chr17 21565857 21566081 -63872399 - L1MEc LINE L1 -3140 3075 2851 344 205 24 12 chr17 21566308 21566391 -63872089 - L1ME2 LINE L1 -10 6154 6071 517 248 133 39 chr17 21566391 21566417 -63872063 - L1MEc LINE L1 -4930 1466 1444 2215 103 0 3 chr17 21566417 21566718 -63871762 + AluSg1 SINE Alu 1 300 -9 517 248 133 39 chr17 21566718 21567098 -63871382 - L1MEc LINE L1 -4952 1444 1022 1698 153 20 7 chr17 21567116 21567416 -63871064 + AluSx SINE Alu 1 304 -8 2341 61 0 17 chr17 21567418 21567714 -63870766 + AluY SINE Alu 1 291 -20 1910 163 0 0 chr17 21567962 21568262 -63870218 - AluJb SINE Alu -12 300 1 3223 255 135 16 chr17 21570027 21571587 -63866893 + L2 LINE L2 1537 3261 -52 304 175 0 0 chr17 21571612 21571669 -63866811 - MIR SINE MIR -109 153 97 504 292 161 25 chr17 21572453 21572727 -63865753 + L2 LINE L2 2924 3234 -38 3276 98 44 6 chr17 21572753 21573231 -63865249 + MER1A DNA MER1_type 34 529 0 25 0 0 0 chr17 21573605 21573630 -63864850 + AT_rich Low_complexity Low_complexity 1 25 0 254 231 0 0 chr17 21573725 21573777 -63864703 + MIR SINE MIR 124 175 -87 224 286 0 71 chr17 21575100 21575184 -63863296 - MIR3 SINE MIR -22 186 109 243 207 308 5 chr17 21575333 21575460 -63863020 - MIR SINE MIR -58 150 1 373 157 255 10 chr17 21577593 21577695 -63860785 + MIR SINE MIR 81 207 -55 22 0 0 0 chr17 21577717 21577739 -63860741 + AT_rich Low_complexity Low_complexity 1 22 0 265 318 45 8 chr17 21577810 21577942 -63860538 + L2 LINE L2 2914 3050 -222 235 300 22 11 chr17 21577988 21578078 -63860402 - L3 LINE CR1 -95 1482 1392 465 242 68 8 chr17 21578376 21578523 -63859957 - MIR SINE MIR -55 153 28 1148 180 57 2 chr17 21578758 21579107 -63859373 - LTR47A LTR ERVL -8 444 1 261 172 11 97 chr17 21579147 21579178 -63859302 - L1MB5 LINE L1 -9 6165 6133 2340 85 0 0 chr17 21579178 21579483 -63858997 - AluSq SINE Alu -8 305 1 261 172 11 97 chr17 21579483 21579544 -63858936 - L1MB5 LINE L1 -41 6133 6081 227 344 45 26 chr17 21579544 21579698 -63858782 + L2 LINE L2 2942 3098 -174 318 359 14 0 chr17 21579990 21580132 -63858348 + MIR3 SINE MIR 23 166 -42 420 215 48 39 chr17 21580264 21580399 -63858081 + MIR SINE MIR 38 173 -62 1306 150 29 20 chr17 21580534 21580780 -63857700 + AluJo SINE Alu 1 248 -64 460 313 42 38 chr17 21580916 21581178 -63857302 - L2 LINE L2 -140 3173 2911 681 200 17 74 chr17 21581198 21581373 -63857107 - MER63B DNA MER1_type -271 165 1 214 262 12 36 chr17 21581375 21581459 -63857021 - L2 LINE L2 -464 2850 2769 235 111 0 0 chr17 21581530 21581566 -63856914 + MER53 DNA DNA 1 36 -153 * 435 138 11 46 chr17 21581565 21581652 -63856828 - MER53 DNA DNA -83 106 23 * 504 92 11 46 chr17 21581577 21581664 -63856816 + MER53 DNA DNA 106 189 0 266 214 214 17 chr17 21582015 21582132 -63856348 - L2 LINE L2 -502 2812 2673 200 306 5 48 chr17 21583040 21583226 -63855254 + (TG)n Simple_repeat Simple_repeat 2 179 0 300 180 105 22 chr17 21583323 21583425 -63855055 - MIR SINE MIR -61 147 34 258 327 37 9 chr17 21584072 21584179 -63854301 - MIR SINE MIR -35 227 118 208 312 225 12 chr17 21584220 21584566 -63853914 + L2 LINE L2 2804 3223 -49 413 304 170 9 chr17 21584782 21585012 -63853468 + MLT1K LTR MaLR 7 273 -315 2005 114 26 23 chr17 21585255 21585561 -63852919 - AluSx SINE Alu -5 307 1 1047 83 0 0 chr17 21585561 21585693 -63852787 - AluSq/x SINE Alu -177 136 5 280 295 54 0 chr17 21585921 21586033 -63852447 - Charlie8 DNA MER1_type -1926 491 374 482 279 197 0 chr17 21586113 21586296 -63852184 - Charlie8 DNA MER1_type -2152 265 47 845 276 63 11 chr17 21586298 21586584 -63851896 + L1MC/D LINE L1 5522 5822 -1986 3924 131 66 84 chr17 21586588 21586886 -63851594 + L1MB7 LINE L1 5088 5390 -794 1880 162 7 0 chr17 21586886 21587176 -63851304 + AluSx SINE Alu 9 300 -12 3924 131 66 84 chr17 21587176 21587346 -63851134 + L1MB7 LINE L1 5390 5561 -623 1774 139 57 0 chr17 21587346 21587626 -63850854 + AluSx SINE Alu 1 296 -16 3924 131 66 84 chr17 21587626 21588108 -63850372 + L1MB7 LINE L1 5561 6011 -173 3006 120 61 113 chr17 21588108 21588361 -63850119 + MER4B LTR ERV1 1 266 -344 1600 87 39 97 chr17 21588361 21588707 -63849773 + AluSx SINE Alu 1 312 0 3006 120 61 113 chr17 21588707 21589097 -63849383 + MER4B LTR ERV1 266 610 0 3924 131 66 84 chr17 21589097 21589235 -63849245 + L1MB7 LINE L1 6011 6150 -34 180 188 0 0 chr17 21589512 21589544 -63848936 + L2 LINE L2 3281 3312 -1 426 348 76 0 chr17 21591355 21591539 -63846941 + MIR SINE MIR 64 261 -1 237 260 29 29 chr17 21591989 21592020 -63846460 - MIR3 SINE MIR -18 190 160 553 275 42 16 chr17 21592020 21592209 -63846271 - MER117 DNA MER1_type -3 194 1 237 260 29 29 chr17 21592209 21592281 -63846199 - MIR3 SINE MIR -47 161 87 213 291 0 64 chr17 21593688 21593798 -63844682 + G-rich Low_complexity Low_complexity 1 103 0 218 213 0 13 chr17 21593884 21593959 -63844521 + (CCCCAG)n Simple_repeat Simple_repeat 2 75 0 26 30 0 0 chr17 21595306 21595339 -63843141 + AT_rich Low_complexity Low_complexity 1 33 0 307 139 155 0 chr17 21597592 21597683 -63840797 + MIR SINE MIR 77 196 -66 2096 110 0 10 chr17 21597691 21597992 -63840488 + AluSx SINE Alu 1 298 -14 314 219 157 0 chr17 21598051 21598172 -63840308 - MIR SINE MIR -62 146 8 243 387 73 8 chr17 21599894 21600142 -63838338 + L2 LINE L2 2636 2899 -415 264 327 84 0 chr17 21600176 21600283 -63838197 + L2 LINE L2 3127 3242 -30 1309 144 95 23 chr17 21600341 21600604 -63837876 - AluJo SINE Alu -30 282 1 203 293 69 0 chr17 21600605 21600663 -63837817 - L2 LINE L2 -13 3300 3239 967 262 27 0 chr17 21600902 21601123 -63837357 + MIR SINE MIR 32 258 -4 1259 237 159 34 chr17 21601194 21601641 -63836839 + MLT1J LTR MaLR 1 503 -8 386 320 92 40 chr17 21602056 21602306 -63836174 + LTR67 LTR ERVL 14 276 -281 795 301 158 8 chr17 21602812 21603174 -63835306 + LTR33 LTR ERVL 106 521 0 1263 220 108 74 chr17 21603414 21603914 -63834566 + LTR33 LTR ERVL 1 517 -4 687 216 20 0 chr17 21604435 21604583 -63833897 - MLT1B LTR MaLR -239 151 1 413 242 168 11 chr17 21605223 21605413 -63833067 - HAL1 LINE L1 -1107 1400 1181 * 4050 167 31 32 chr17 21605407 21606112 -63832368 - L1MC2 LINE L1 -303 6435 5713 1871 148 3 0 chr17 21606112 21606403 -63832077 - AluJb SINE Alu -17 295 4 4050 167 31 32 chr17 21606403 21606746 -63831734 - L1MC2 LINE L1 -1025 5713 5371 2459 221 27 30 chr17 21606771 21606979 -63831501 - L1MC2 LINE L1 -1886 4654 4447 1059 157 0 0 chr17 21606979 21607138 -63831342 + FRAM SINE Alu 1 159 -7 2459 221 27 30 chr17 21607138 21607603 -63830877 - L1MC2 LINE L1 -2093 4447 3983 825 234 0 0 chr17 21607614 21607789 -63830691 - AluJb SINE Alu -1 311 137 268 235 0 0 chr17 21607792 21607860 -63830620 - L1MC2 LINE L1 -2569 3971 3904 * 2955 189 40 43 chr17 21607843 21608071 -63830409 - L1MC2 LINE L1 -4660 1880 1653 2273 66 0 54 chr17 21608071 21608388 -63830092 - AluY SINE Alu -11 300 1 2955 189 40 43 chr17 21608388 21609036 -63829444 - L1MC2 LINE L1 -4887 1653 1007 1183 127 0 0 chr17 21609036 21609235 -63829245 - AluSx SINE Alu 0 314 116 358 91 152 0 chr17 21609235 21609301 -63829179 + MADE1 DNA Mariner 5 80 0 774 175 0 0 chr17 21609301 21609421 -63829059 - AluSx SINE Alu -192 121 2 3109 217 58 8 chr17 21609437 21610150 -63828330 - L1MC2 LINE L1 -5774 766 19 225 360 0 0 chr17 21610263 21610349 -63828131 - L2 LINE L2 -584 2730 2645 296 223 125 27 chr17 21610832 21610987 -63827493 + MIR SINE MIR 91 262 0 2225 102 3 0 chr17 21611237 21611541 -63826939 + AluSc SINE Alu 1 305 -4 246 238 110 43 chr17 21611546 21611729 -63826751 - MIR SINE MIR -8 254 23 248 202 37 138 chr17 21612472 21612581 -63825899 + MIR SINE MIR 91 188 -74 1078 148 0 16 chr17 21612594 21612763 -63825717 + AluSc SINE Alu 130 297 -12 2395 84 0 0 chr17 21612763 21613073 -63825407 + AluSg SINE Alu 1 310 0 1078 148 0 16 chr17 21613073 21613085 -63825395 + AluSc SINE Alu 297 308 -1 335 281 177 37 chr17 21613406 21613799 -63824681 + L2 LINE L2 2658 3091 -181 1456 124 49 17 chr17 21613896 21614330 -63824150 - LTR54 LTR ERV1 0 510 1 234 268 209 43 chr17 21614624 21614810 -63823670 + MIR SINE MIR 30 257 -5 502 258 139 88 chr17 21615298 21615628 -63822852 + L2 LINE L2 2926 3272 0 368 301 19 0 chr17 21615628 21615784 -63822696 + (TGGA)n Simple_repeat Simple_repeat 2 160 0 180 252 18 9 chr17 21615784 21615815 -63822665 + (TGAA)n Simple_repeat Simple_repeat 2 31 -82 2009 120 0 69 chr17 21615815 21616149 -63822331 + AluSx SINE Alu 1 311 -1 180 252 18 9 chr17 21616149 21616228 -63822252 + (TGAA)n Simple_repeat Simple_repeat 31 113 0 315 264 23 0 chr17 21616250 21616337 -63822143 + (TGGA)n Simple_repeat Simple_repeat 3 91 0 1718 154 137 20 chr17 21616353 21616703 -63821777 + MSTD LTR MaLR 5 395 -1 373 252 59 7 chr17 21616797 21616932 -63821548 - MIR3 SINE MIR -31 177 36 953 211 34 5 chr17 21617080 21617288 -63821192 + MIR SINE MIR 12 225 -37 278 306 0 0 chr17 21617389 21617487 -63820993 + (TG)n Simple_repeat Simple_repeat 1 98 0 204 200 0 0 chr17 21617644 21617689 -63820791 + (TG)n Simple_repeat Simple_repeat 1 45 0 1478 160 101 0 chr17 21618757 21618907 -63819573 - AluJb SINE Alu -17 295 162 420 20 0 0 chr17 21618907 21618956 -63819524 + (TG)n Simple_repeat Simple_repeat 2 50 0 1478 160 101 0 chr17 21618956 21619073 -63819407 - AluJb SINE Alu -150 162 1 438 209 11 0 chr17 21619098 21619189 -63819291 + L2 LINE L2 3178 3269 -3 226 200 36 0 chr17 21619686 21619741 -63818739 + L2 LINE L2 2637 2693 -621 976 295 113 13 chr17 21619745 21620287 -63818193 + MER45C DNA AcHobo 3 633 -320 1778 173 0 7 chr17 21620334 21620617 -63817863 + AluJb SINE Alu 1 305 0 217 0 0 0 chr17 21620617 21620641 -63817839 + (CAA)n Simple_repeat Simple_repeat 1 180 0 2209 104 10 0 chr17 21620645 21620926 -63817554 + AluSp SINE Alu 1 309 -4 201 33 0 33 chr17 21620926 21620956 -63817524 + (TAA)n Simple_repeat Simple_repeat 2 180 0 233 337 36 0 chr17 21621348 21621431 -63817049 + L2 LINE L2 3209 3294 -19 218 367 92 0 chr17 21621474 21621583 -63816897 - MIR SINE MIR -74 134 16 250 209 0 0 chr17 21622657 21622700 -63815780 + L2 LINE L2 3230 3272 0 208 214 54 0 chr17 21622874 21622930 -63815550 + CT-rich Low_complexity Low_complexity 5 63 0 204 282 0 58 chr17 21623655 21623758 -63814722 + L3 LINE CR1 1304 1400 -177 411 327 65 9 chr17 21623909 21624126 -63814354 - MIR SINE MIR -32 230 2 248 341 123 14 chr17 21629625 21629763 -63808717 - MIR3 SINE MIR -54 154 2 378 358 58 9 chr17 21630298 21630524 -63807956 - MIR SINE MIR -4 258 22 1720 238 81 40 chr17 21631142 21631523 -63806957 - MER67C LTR ERV1 0 710 287 2309 93 0 3 chr17 21631523 21631814 -63806666 + AluSg SINE Alu 1 290 -20 1720 238 81 40 chr17 21631814 21632114 -63806366 - MER67C LTR ERV1 -423 287 1 2105 68 0 8 chr17 21632152 21632415 -63806065 - AluY SINE Alu -25 286 26 2321 71 7 0 chr17 21632433 21632749 -63805731 - AluY SINE Alu 0 318 1 1778 164 29 15 chr17 21632859 21633201 -63805279 - MLT1A1 LTR MaLR -9 356 10 2398 104 3 0 chr17 21633506 21633813 -63804667 - AluSp SINE Alu -5 308 1 2077 85 0 39 chr17 21634366 21634476 -63804004 + AluSq SINE Alu 34 147 -166 2190 103 0 3 chr17 21634476 21634758 -63803722 + AluSc SINE Alu 15 295 -14 2077 85 0 39 chr17 21634758 21634928 -63803552 + AluSq SINE Alu 147 303 -10 2139 132 0 0 chr17 21636221 21636524 -63801956 + AluSx SINE Alu 1 303 -9 885 186 23 17 chr17 21636679 21636851 -63801629 - AluJb SINE Alu -3 309 137 2446 149 41 43 chr17 21637145 21637656 -63800824 - LTR54 LTR ERV1 0 510 1 2344 131 50 69 chr17 21637729 21638165 -63800315 - MSTA LTR MaLR 0 428 1 3565 134 31 22 chr17 21638371 21638919 -63799561 - LTR49 LTR ERV1 -2 593 38 2306 76 28 0 chr17 21638919 21639045 -63799435 + AluY SINE Alu 1 122 -189 381 43 0 0 chr17 21639045 21639092 -63799388 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 2306 76 28 0 chr17 21639092 21639253 -63799227 + AluY SINE Alu 122 296 -15 3565 134 31 22 chr17 21639253 21639292 -63799188 - LTR49 LTR ERV1 -557 38 1 1163 145 17 54 chr17 21639314 21639349 -63799131 - LTR49-int LTR ERV1 -15 6316 6281 1990 142 7 7 chr17 21639349 21639645 -63798835 + AluSx SINE Alu 1 296 -16 1163 145 17 54 chr17 21639645 21639850 -63798630 - LTR49-int LTR ERV1 -50 6281 6085 1859 126 0 4 chr17 21639856 21640111 -63798369 - AluSx SINE Alu -58 254 1 1773 109 10 6 chr17 21640111 21640504 -63797976 - LTR49-int LTR ERV1 -391 5940 5503 1225 139 0 25 chr17 21640504 21640705 -63797775 + AluSg/x SINE Alu 115 310 0 3584 197 64 60 chr17 21640705 21640767 -63797713 - LTR49-int LTR ERV1 -3805 2526 2466 2165 120 0 13 chr17 21640767 21641067 -63797413 - AluSq SINE Alu -17 296 1 3584 197 64 60 chr17 21641067 21641132 -63797348 - LTR49-int LTR ERV1 -3865 2466 2403 2375 71 27 0 chr17 21641132 21641427 -63797053 - AluSp SINE Alu -10 303 1 3584 197 64 60 chr17 21641427 21641986 -63796494 - LTR49-int LTR ERV1 -3928 2403 1848 2128 103 65 0 chr17 21641986 21642278 -63796202 + AluSx SINE Alu 1 311 -1 3584 197 64 60 chr17 21642278 21642380 -63796100 - LTR49-int LTR ERV1 -4483 1848 1748 325 70 35 0 chr17 21642380 21642437 -63796043 + (CA)n Simple_repeat Simple_repeat 2 60 0 3584 197 64 60 chr17 21642437 21642659 -63795821 - LTR49-int LTR ERV1 -4583 1748 1509 1983 137 12 63 chr17 21642660 21642886 -63795594 - LTR49-int LTR ERV1 -4989 1342 1145 2082 132 3 0 chr17 21642886 21643174 -63795306 - AluSx SINE Alu -21 291 3 1983 137 12 63 chr17 21643174 21643362 -63795118 - LTR49-int LTR ERV1 -5186 1145 949 1470 114 76 15 chr17 21643359 21643623 -63794857 - LTR49-int LTR ERV1 -6030 301 22 * 250 289 130 48 chr17 21643736 21643855 -63794625 + LTR34 LTR ERV1 274 382 -317 3263 116 94 27 chr17 21643855 21643979 -63794501 - LTR24C LTR ERV1 0 635 521 2188 94 3 13 chr17 21643979 21644277 -63794203 + AluSc SINE Alu 1 295 -14 3263 116 94 27 chr17 21644277 21644747 -63793733 - LTR24C LTR ERV1 -114 521 1 250 289 130 48 chr17 21644747 21644835 -63793645 + LTR34 LTR ERV1 382 498 -201 2918 167 53 6 chr17 21645040 21645606 -63792874 - LTR49 LTR ERV1 -2 651 1 3738 184 56 54 chr17 21645613 21646470 -63792010 + MER21B LTR ERV1 3 861 -2 4628 98 29 5 chr17 21646622 21646851 -63791629 + PABL_B LTR ERV1 1 223 -444 2082 136 3 10 chr17 21646851 21647152 -63791328 - AluSx SINE Alu -13 299 1 4628 98 29 5 chr17 21647152 21647170 -63791310 + PABL_B LTR ERV1 223 239 -428 2487 90 0 3 chr17 21647170 21647480 -63791000 - AluSq SINE Alu -4 309 1 4628 98 29 5 chr17 21647480 21647882 -63790598 + PABL_B LTR ERV1 239 667 0 2065 152 7 0 chr17 21647995 21648297 -63790183 + AluSx SINE Alu 1 304 -8 2151 145 87 79 chr17 21648389 21648894 -63789586 + LTR54 LTR ERV1 1 509 -1 1328 130 5 9 chr17 21649185 21649401 -63789079 + MER4D LTR ERV1 1 215 -688 1275 118 0 22 chr17 21649402 21649580 -63788900 - AluSg/x SINE Alu -16 296 123 3722 146 59 9 chr17 21649580 21650061 -63788419 + MER4D LTR ERV1 206 731 -172 2216 126 0 0 chr17 21650061 21650354 -63788126 - AluSg SINE Alu -17 293 1 3722 146 59 9 chr17 21650354 21650537 -63787943 + MER4D LTR ERV1 731 903 0 1345 235 51 24 chr17 21651358 21651911 -63786569 - L1MEc LINE L1 -3451 2931 2364 613 319 75 59 chr17 21651923 21652229 -63786251 - L1MEc LINE L1 -4944 1619 1319 2173 138 151 0 chr17 21652229 21652599 -63785881 + MSTA LTR MaLR 3 428 0 9528 164 28 13 chr17 21652599 21652645 -63785835 + MSTA-int LTR MaLR 1 45 -1606 6942 79 7 52 chr17 21652645 21654383 -63784097 + SVA Other Other 2 1385 -1 9528 164 28 13 chr17 21654383 21655960 -63782520 + MSTA-int LTR MaLR 45 1651 0 2226 119 132 26 chr17 21655960 21656274 -63782206 + MSTA LTR MaLR 1 365 -63 2379 105 3 0 chr17 21656274 21656578 -63781902 - AluSq SINE Alu -8 305 1 2226 119 132 26 chr17 21656578 21656650 -63781830 + MSTA LTR MaLR 365 428 0 613 319 75 59 chr17 21656650 21656714 -63781766 - L1MEc LINE L1 -5243 1320 1241 289 284 12 12 chr17 21656715 21656877 -63781603 - L1MEc LINE L1 -5423 1140 979 1407 117 8 17 chr17 21656883 21657123 -63781357 - L1MB3 LINE L1 0 6183 5946 1818 226 80 42 chr17 21657170 21657876 -63780604 - L1M4 LINE L1 -4521 1792 993 709 286 0 30 chr17 21658844 21659110 -63779370 - L1M3d LINE L1 -4958 1173 916 818 341 62 15 chr17 21659513 21659915 -63778565 - L1M3d LINE L1 -5720 421 1 1468 153 112 70 chr17 21660035 21660259 -63778221 - MSTB1 LTR MaLR -12 420 172 1206 179 75 101 chr17 21660259 21660567 -63777913 - AluJo SINE Alu -2 300 1 1468 153 112 70 chr17 21660567 21660727 -63777753 - MSTB1 LTR MaLR -260 172 20 1852 232 9 27 chr17 21660763 21661212 -63777268 + LTR47B LTR ERVL 1 441 -2 1805 183 55 48 chr17 21661359 21661817 -63776663 + MLT1C LTR MaLR 1 461 -6 265 335 1 0 chr17 21661859 21661972 -63776508 + L1ME LINE L1 5481 5594 -527 2055 96 59 40 chr17 21662287 21662590 -63775890 + AluSg SINE Alu 1 309 -1 2407 109 0 3 chr17 21662597 21662910 -63775570 + AluSx SINE Alu 1 312 0 1587 203 17 3 chr17 21663249 21663365 -63775115 + AluJo SINE Alu 1 114 -198 216 0 0 0 chr17 21663365 21663389 -63775091 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1587 203 17 3 chr17 21663389 21663572 -63774908 + AluJo SINE Alu 114 304 -8 2228 72 7 4 chr17 21663652 21663988 -63774492 - AluY SINE Alu 0 338 2 2240 169 57 2 chr17 21664765 21665167 -63773313 + MSTB LTR MaLR 3 426 0 737 136 48 136 chr17 21666139 21666356 -63772124 + LTR34 LTR ERV1 1 198 -390 509 166 194 22 chr17 21666377 21666516 -63771964 - MER4C LTR ERV1 0 465 303 1778 122 21 77 chr17 21666585 21666963 -63771517 - MER4A LTR ERV1 -307 357 1 2540 147 42 14 chr17 21666982 21667464 -63771016 + LTR34 LTR ERV1 205 699 0 4249 114 34 44 chr17 21667546 21667682 -63770798 - LTR8A LTR ERV1 0 727 591 2163 123 0 22 chr17 21667682 21668000 -63770480 + AluSx SINE Alu 1 311 -1 4249 114 34 44 chr17 21668000 21668597 -63769883 - LTR8A LTR ERV1 -136 591 1 1244 222 4 4 chr17 21668702 21668941 -63769539 - MER8 DNA MER2_type 0 239 1 1987 106 8 98 chr17 21668971 21669357 -63769123 - MER4B LTR ERV1 -259 351 1 2345 92 10 0 chr17 21669449 21669742 -63768738 - AluSx SINE Alu -16 296 1 2220 74 26 3 chr17 21670297 21670687 -63767793 - LTR7 LTR ERV1 -7 443 1 5287 108 14 14 chr17 21670854 21671633 -63766847 + MER4E LTR ERV1 1 779 0 1947 141 25 0 chr17 21672073 21672357 -63766123 - AluJo SINE Alu -16 296 6 223 361 52 10 chr17 21672762 21672859 -63765621 + MIR SINE MIR 48 148 -114 2885 162 56 192 chr17 21672986 21673998 -63764482 + MSTB-int LTR MaLR 397 1271 -309 1114 162 0 22 chr17 21673998 21674177 -63764303 - AluJb SINE Alu 0 312 138 532 132 60 6 chr17 21674179 21674346 -63764134 + (TA)n Simple_repeat Simple_repeat 1 176 0 793 185 0 0 chr17 21674346 21674465 -63764015 - FLAM_C SINE Alu -23 120 2 1819 123 14 80 chr17 21674466 21674733 -63763747 + MSTB-int LTR MaLR 1325 1565 -86 2004 144 3 0 chr17 21674733 21675025 -63763455 + AluSx SINE Alu 1 293 -19 1819 123 14 80 chr17 21675025 21675107 -63763373 + MSTB-int LTR MaLR 1565 1651 0 1968 153 79 27 chr17 21675107 21675456 -63763024 + MSTB LTR MaLR 1 375 -51 427 136 12 25 chr17 21675456 21675537 -63762943 - MADE1 DNA Mariner 0 80 1 1968 153 79 27 chr17 21675537 21675592 -63762888 + MSTB LTR MaLR 375 426 0 2432 102 0 0 chr17 21675692 21675996 -63762484 + AluSp SINE Alu 2 305 -8 881 251 95 3 chr17 21676362 21676657 -63761823 - L1ME2 LINE L1 -171 5993 5672 2187 101 18 0 chr17 21676987 21677273 -63761207 + AluSx SINE Alu 1 291 -21 1264 176 63 102 chr17 21677336 21677797 -63760683 - LTR47B LTR ERVL 0 443 1 181 333 78 0 chr17 21677806 21677896 -63760584 + MIR3 SINE MIR 101 197 -11 1513 174 17 53 chr17 21678052 21678142 -63760338 - MER74A LTR ERVL 0 558 466 2094 126 3 13 chr17 21678142 21678444 -63760036 + AluSq SINE Alu 5 303 -10 1513 174 17 53 chr17 21678444 21678455 -63760025 - MER74A LTR ERVL -92 466 456 1710 132 83 31 chr17 21678455 21678744 -63759736 + AluJb SINE Alu 1 304 -8 1513 174 17 53 chr17 21678744 21678997 -63759483 - MER74A LTR ERVL -102 456 216 2474 74 0 0 chr17 21679497 21679794 -63758686 - AluSg SINE Alu -13 297 1 2050 118 54 0 chr17 21679797 21680076 -63758404 - AluSx SINE Alu -18 294 1 1660 128 23 122 chr17 21680076 21680420 -63758060 - AluYb8 SINE Alu -7 311 1 854 121 0 32 chr17 21680423 21680547 -63757933 - AluSq/x SINE Alu -179 133 14 2208 94 10 26 chr17 21680662 21680971 -63757509 + AluSc SINE Alu 1 304 -5 291 302 86 0 chr17 21680985 21681101 -63757379 - MIR3 SINE MIR -35 173 48 2108 124 3 7 chr17 21681131 21681430 -63757050 - AluSq SINE Alu -15 298 1 2539 48 3 0 chr17 21681666 21681961 -63756519 - AluY SINE Alu -15 296 1 1841 155 0 0 chr17 21681966 21682244 -63756236 - AluJo SINE Alu -21 291 14 283 355 0 45 chr17 21682248 21682358 -63756122 + L2 LINE L2 3209 3313 0 3489 175 42 61 chr17 21683343 21683367 -63755113 - L1MB8 LINE L1 -7 6407 6384 2578 61 0 13 chr17 21683367 21683679 -63754801 + AluSp SINE Alu 1 308 -5 3489 175 42 61 chr17 21683679 21683920 -63754560 - L1MB8 LINE L1 -30 6384 6140 2107 118 4 0 chr17 21683920 21684199 -63754281 + AluSq SINE Alu 1 280 -33 279 0 0 0 chr17 21684199 21684230 -63754250 + (CA)n Simple_repeat Simple_repeat 1 31 0 3489 175 42 61 chr17 21684230 21684782 -63753698 - L1MB8 LINE L1 -273 6141 5580 231 114 0 0 chr17 21684782 21684817 -63753663 + (TA)n Simple_repeat Simple_repeat 1 35 0 2174 86 3 33 chr17 21684817 21685118 -63753362 - AluSq SINE Alu -21 292 1 3489 175 42 61 chr17 21685118 21685220 -63753260 - L1MB8 LINE L1 -832 5582 5501 1930 156 33 0 chr17 21685225 21685558 -63752922 + MSTB LTR MaLR 83 426 0 6335 209 64 54 chr17 21685558 21686481 -63751999 - L1MB8 LINE L1 -877 5505 4593 840 128 30 30 chr17 21686481 21686614 -63751866 - FLAM_C SINE Alu 0 133 1 6335 209 64 54 chr17 21686614 21686645 -63751835 - L1MB8 LINE L1 -1789 4593 4564 2550 78 0 0 chr17 21686645 21686953 -63751527 + AluSc SINE Alu 1 308 -1 6335 209 64 54 chr17 21686953 21687266 -63751214 - L1MB8 LINE L1 -1818 4564 4256 12089 32 1 18 chr17 21687266 21688676 -63749804 + SVA Other Other 1 1386 0 6335 209 64 54 chr17 21688676 21689326 -63749154 - L1MB8 LINE L1 -2126 4256 3567 704 183 106 95 chr17 21689380 21689511 -63748969 - L1MB8 LINE L1 -3453 2929 2801 2228 112 3 0 chr17 21689511 21689807 -63748673 + AluSp SINE Alu 1 297 -16 704 183 106 95 chr17 21689807 21689948 -63748532 - L1MB8 LINE L1 -3581 2801 2654 1747 144 17 50 chr17 21689957 21690405 -63748075 - Tigger5 DNA MER2_type 0 2323 1 732 165 8 15 chr17 21690440 21690573 -63747907 - FRAM SINE Alu -1 175 44 2066 119 7 0 chr17 21690599 21690877 -63747603 - AluSx SINE Alu -32 280 1 292 200 42 11 chr17 21690888 21690983 -63747497 - L1MB8 LINE L1 -4028 2356 2259 321 189 0 0 chr17 21691005 21691079 -63747401 - L1MA9 LINE L1 -176 6136 6063 * 3015 134 19 74 chr17 21691077 21691232 -63747248 - L1M2 LINE L1 -743 5403 5241 1886 155 13 13 chr17 21691232 21691535 -63746945 - AluSx SINE Alu -9 303 1 3015 134 19 74 chr17 21691535 21691596 -63746884 - L1M2 LINE L1 -905 5241 5178 1853 132 46 30 chr17 21691596 21691899 -63746581 + AluSx SINE Alu 1 308 -4 3015 134 19 74 chr17 21691899 21692482 -63745998 - L1M2 LINE L1 -968 5178 4734 1183 200 59 0 chr17 21692484 21692704 -63745776 - AluJo SINE Alu -8 304 72 799 118 30 0 chr17 21692704 21692839 -63745641 - L1M2 LINE L1 -1401 4745 4607 2207 113 36 3 chr17 21692840 21693141 -63745339 + AluSq SINE Alu 1 311 -2 2474 72 0 20 chr17 21693151 21693457 -63745023 + AluY SINE Alu 1 300 -11 2216 119 19 10 chr17 21693459 21693580 -63744900 + AluSp SINE Alu 1 119 -194 237 98 0 0 chr17 21693580 21693621 -63744859 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 2216 119 19 10 chr17 21693621 21693809 -63744671 + AluSp SINE Alu 119 313 0 2380 99 0 3 chr17 21693908 21694212 -63744268 + AluSx SINE Alu 1 303 -9 993 172 0 23 chr17 21694215 21694389 -63744091 + LTR39 LTR ERV1 614 783 0 1939 256 52 25 chr17 21694390 21694594 -63743886 - L1 LINE L1 -2981 3165 2968 5619 127 16 25 chr17 21694594 21695146 -63743334 + MER4D LTR ERV1 1 543 -360 2163 121 13 10 chr17 21695146 21695451 -63743029 - AluSx SINE Alu -6 306 1 5619 127 16 25 chr17 21695451 21695809 -63742671 + MER4D LTR ERV1 543 903 0 2167 117 17 10 chr17 21695814 21696113 -63742367 - AluSx SINE Alu -11 301 1 1939 256 52 25 chr17 21696113 21696440 -63742040 - L1 LINE L1 -3181 2965 2600 2355 86 10 0 chr17 21696440 21696743 -63741737 - AluSp SINE Alu -7 306 1 1939 256 52 25 chr17 21696743 21696959 -63741521 - L1 LINE L1 -3546 2600 2391 2155 270 56 62 chr17 21697067 21697370 -63741110 - HERV16 LTR ERVL -3642 1354 1051 2457 90 0 0 chr17 21697370 21697671 -63740809 - AluSc SINE Alu -8 301 1 2155 270 56 62 chr17 21697671 21698229 -63740251 - HERV16 LTR ERVL -3945 1051 497 2098 95 3 7 chr17 21698229 21698512 -63739968 - AluSp SINE Alu -2 311 30 2155 270 56 62 chr17 21698512 21698680 -63739800 - HERV16 LTR ERVL -4499 497 330 542 268 32 13 chr17 21698776 21698933 -63739547 - HERV16 LTR ERVL -4828 168 9 661 198 80 0 chr17 21698941 21699103 -63739377 - LTR16A LTR ERVL -1 449 275 363 280 10 0 chr17 21699159 21699259 -63739221 - LTR16A LTR ERVL -324 126 26 343 239 34 148 chr17 21699543 21699585 -63738895 - MER5B DNA MER1_type -3 175 130 2333 105 0 3 chr17 21699585 21699898 -63738582 - AluSx SINE Alu 0 312 1 343 239 34 148 chr17 21699898 21700031 -63738449 - MER5B DNA MER1_type -48 130 20 295 292 21 10 chr17 21700067 21700163 -63738317 - MIR SINE MIR -61 147 51 965 152 6 62 chr17 21700827 21701005 -63737475 + FAM SINE Alu 1 168 -7 2477 42 0 3 chr17 21701016 21701304 -63737176 + AluY SINE Alu 1 287 -24 585 42 0 0 chr17 21701313 21701385 -63737095 + (GA)n Simple_repeat Simple_repeat 2 73 0 357 117 83 0 chr17 21702086 21702146 -63736334 - MSTB1 LTR MaLR 0 432 368 1804 137 0 0 chr17 21702151 21702400 -63736080 + AluSx SINE Alu 1 249 -63 776 102 0 0 chr17 21702400 21702498 -63735982 - AluSg SINE Alu -211 99 2 2413 64 0 68 chr17 21702533 21702859 -63735621 - AluY SINE Alu -7 304 1 2479 68 14 0 chr17 21703314 21703608 -63734872 - AluSp SINE Alu -15 298 1 725 116 192 27 chr17 21703822 21703968 -63734512 + MLT1B LTR MaLR 1 170 -220 1499 191 62 35 chr17 21704190 21704530 -63733950 + MSTD LTR MaLR 1 349 -47 797 299 88 52 chr17 21704602 21705183 -63733297 + L1M4 LINE L1 3 604 -5938 2389 101 0 0 chr17 21705183 21705490 -63732990 + AluSc SINE Alu 1 307 -2 2164 101 30 0 chr17 21705499 21705795 -63732685 + AluSx SINE Alu 1 305 -7 259 73 24 0 chr17 21705799 21705840 -63732640 + L1MB7 LINE L1 5738 5779 -399 1860 74 22 0 chr17 21705840 21706070 -63732410 + AluSx SINE Alu 1 235 -77 514 198 0 0 chr17 21706070 21706161 -63732319 + L1MB7 LINE L1 5898 5988 -190 818 204 131 80 chr17 21706175 21706592 -63731888 + MLT2B1 LTR ERVL 1 414 0 535 139 243 7 chr17 21706593 21706737 -63731743 + L1MB7 LINE L1 5998 6175 -9 426 96 0 0 chr17 21707351 21707424 -63731056 + (CTG)n Simple_repeat Simple_repeat 3 75 0 840 174 0 0 chr17 21708219 21708351 -63730129 + FLAM_C SINE Alu 2 133 0 2288 105 3 0 chr17 21708429 21708725 -63729755 + AluSx SINE Alu 1 297 -15 1265 223 97 35 chr17 21710120 21710493 -63727987 + MSTD LTR MaLR 1 396 0 596 256 48 1 chr17 21710563 21710729 -63727751 - MIR SINE MIR -37 171 30 2067 135 0 0 chr17 21710818 21711132 -63727348 - AluSx SINE Alu 0 314 1 2119 113 61 0 chr17 21711184 21711477 -63727003 + AluSx SINE Alu 1 311 -1 2205 93 0 4 chr17 21712363 21712668 -63725812 - AluSc SINE Alu 0 304 1 2291 120 3 0 chr17 21713663 21713972 -63724508 + AluJb SINE Alu 1 310 -2 915 140 14 14 chr17 21714001 21714144 -63724336 + AluJo SINE Alu 1 143 -169 1468 94 0 0 chr17 21714147 21714328 -63724152 + AluSg SINE Alu 4 184 -126 238 97 0 0 chr17 21714329 21714360 -63724120 + AluSg SINE Alu 219 249 -52 1043 191 33 9 chr17 21714360 21714570 -63723910 + AluJo SINE Alu 85 299 -13 383 320 44 61 chr17 21714979 21715160 -63723320 - L1ME LINE L1 -521 5600 5423 2383 71 40 0 chr17 21715169 21715465 -63723015 + AluY SINE Alu 1 308 -3 609 190 61 25 chr17 21715531 21715694 -63722786 + MER96B DNA MER1_type? 1 169 -248 887 146 8 0 chr17 21715787 21715917 -63722563 - AluSq/x SINE Alu -181 131 1 1760 166 16 50 chr17 21716129 21716448 -63722032 + AluJo SINE Alu 1 308 -4 282 137 39 0 chr17 21716466 21716517 -63721963 - Alu SINE Alu -255 53 1 214 29 57 0 chr17 21716522 21716557 -63721923 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 2416 84 3 7 chr17 21716561 21716869 -63721611 - AluSq SINE Alu -1 312 6 8470 54 4 0 chr17 21716916 21717881 -63720599 - LTR5 LTR ERVK 0 969 1 928 169 19 6 chr17 21717961 21718121 -63720359 - FRAM SINE Alu -14 162 1 1910 150 7 0 chr17 21718166 21718460 -63720020 + AluSx SINE Alu 1 296 -16 2234 112 3 0 chr17 21718597 21718892 -63719588 + AluSx SINE Alu 1 296 -16 2204 84 0 39 chr17 21718892 21719200 -63719280 + AluSx SINE Alu 1 297 -15 23 33 0 0 chr17 21719315 21719345 -63719135 + GC_rich Low_complexity Low_complexity 1 30 0 245 207 0 103 chr17 21719454 21719570 -63718910 + C-rich Low_complexity Low_complexity 2 105 0 627 42 0 0 chr17 21720139 21720211 -63718269 + tRNA-Trp tRNA tRNA 1 72 -3 702 277 70 52 chr17 21720832 21721334 -63717146 + L1MEd LINE L1 505 1015 -5104 1673 135 82 7 chr17 21721413 21721695 -63716785 + AluJo SINE Alu 1 303 -9 1876 83 4 4 chr17 21721697 21721951 -63716529 + AluSp SINE Alu 50 303 -10 1207 155 103 94 chr17 21721951 21722078 -63716402 - MER4D LTR ERV1 -576 327 203 1840 100 86 10 chr17 21722078 21722369 -63716111 - AluSq SINE Alu 0 313 1 1207 155 103 94 chr17 21722369 21722545 -63715935 - MER4D LTR ERV1 -700 203 26 2333 60 17 0 chr17 21722545 21722845 -63715635 - AluY SINE Alu -6 305 1 1207 155 103 94 chr17 21722845 21722872 -63715608 - MER4D LTR ERV1 -877 26 1 258 287 40 20 chr17 21723409 21723510 -63714970 + L1ME4a LINE L1 5970 6072 -49 735 252 22 82 chr17 21723520 21723790 -63714690 + MIR SINE MIR 1 254 -8 4275 133 53 105 chr17 21723810 21723832 -63714648 + MER4D LTR ERV1 1 23 -880 1757 161 0 31 chr17 21723832 21724154 -63714326 + AluJo SINE Alu 1 312 0 4275 133 53 105 chr17 21724154 21724346 -63714134 + MER4D LTR ERV1 23 224 -679 2305 94 0 0 chr17 21724346 21724655 -63713825 + AluSq SINE Alu 1 309 -4 4275 133 53 105 chr17 21724655 21724795 -63713685 + MER4D LTR ERV1 224 370 -533 216 0 0 0 chr17 21724795 21724819 -63713661 + (TA)n Simple_repeat Simple_repeat 2 25 0 2239 116 0 0 chr17 21724819 21725129 -63713351 - AluSq SINE Alu -3 310 1 4275 133 53 105 chr17 21725129 21725721 -63712759 + MER4D LTR ERV1 368 900 -3 1612 158 79 93 chr17 21726119 21726690 -63711790 - Charlie2 DNA MER1_type -16 2846 2284 1959 103 3 28 chr17 21726865 21727156 -63711324 - AluSx SINE Alu -15 297 14 1704 129 47 4 chr17 21727569 21727847 -63710633 - AluSx SINE Alu -22 290 1 579 213 0 9 chr17 21727980 21728088 -63710392 + FLAM_C SINE Alu 2 108 -35 1311 202 18 3 chr17 21728109 21728391 -63710089 - AluJo SINE Alu -26 286 1 47 0 0 0 chr17 21728394 21728441 -63710039 + AT_rich Low_complexity Low_complexity 1 47 0 1345 167 49 24 chr17 21728441 21728728 -63709752 + AluJo SINE Alu 12 305 -7 2841 91 42 16 chr17 21779088 21779517 -63658963 - L1PB3 LINE L1 -2 6152 5713 24 0 0 0 chr17 21780062 21780086 -63658394 + AT_rich Low_complexity Low_complexity 1 24 0 38 0 0 0 chr17 21780679 21780717 -63657763 + AT_rich Low_complexity Low_complexity 1 38 0 733 150 65 39 chr17 21780724 21780877 -63657603 - FRAM SINE Alu -19 157 1 1749 110 4 0 chr17 21781116 21781362 -63657118 - AluSx SINE Alu -10 302 56 1740 161 17 3 chr17 21781575 21781867 -63656613 - AluSx SINE Alu -16 296 1 277 132 75 0 chr17 21783131 21783184 -63655296 + Alu SINE Alu 245 301 0 2071 86 0 35 chr17 21783755 21784068 -63654412 - AluSq SINE Alu -11 302 1 811 201 7 0 chr17 21784160 21784304 -63654176 + AluJo SINE Alu 4 148 -164 2249 32 0 76 chr17 21784406 21784721 -63653759 - AluY SINE Alu -20 291 1 1888 60 124 0 chr17 21784774 21785039 -63653441 - AluSq SINE Alu -10 303 6 1830 137 0 39 chr17 21785514 21785820 -63652660 - AluJb SINE Alu -12 300 7 183 129 0 0 chr17 21785902 21785933 -63652547 + (TC)n Simple_repeat Simple_repeat 1 31 0 229 222 0 0 chr17 21786041 21786095 -63652385 - L1MCa LINE L1 -3323 3103 3050 2004 117 50 0 chr17 21786103 21786401 -63652079 - AluSp SINE Alu 0 313 1 2215 97 3 0 chr17 21786449 21786747 -63651733 - AluSp SINE Alu -14 299 1 1250 259 100 20 chr17 21786747 21787061 -63651419 - L1MCa LINE L1 -3366 3060 2690 1591 126 42 27 chr17 21787061 21787323 -63651157 + AluJb SINE Alu 33 298 -14 1250 259 100 20 chr17 21787323 21787506 -63650974 - L1MCa LINE L1 -3736 2690 2523 266 0 29 0 chr17 21787510 21787544 -63650936 + (TTA)n Simple_repeat Simple_repeat 2 36 0 763 155 9 0 chr17 21787548 21787664 -63650816 - FLAM_C SINE Alu -25 118 2 1210 112 0 37 chr17 21787670 21787885 -63650595 - L1MCa LINE L1 -4175 2251 2045 1708 169 7 0 chr17 21788251 21788553 -63649927 + AluJb SINE Alu 1 304 -8 853 174 0 13 chr17 21788575 21788724 -63649756 + AluSq/x SINE Alu 1 147 -166 1795 119 18 3 chr17 21788830 21789115 -63649365 - AluSp SINE Alu -22 291 3 1318 163 203 49 chr17 21789603 21789676 -63648804 + Tigger7 DNA MER2_type 1 61 -2426 2424 57 0 3 chr17 21789676 21789977 -63648503 - AluY SINE Alu -9 302 3 1318 163 203 49 chr17 21789977 21790209 -63648271 + Tigger7 DNA MER2_type 61 353 -2134 2112 106 3 0 chr17 21790346 21790639 -63647841 + AluSp SINE Alu 3 296 -17 2106 122 3 0 chr17 21790648 21790951 -63647529 + AluSx SINE Alu 1 304 -8 1068 92 0 13 chr17 21790959 21791112 -63647368 + AluJb SINE Alu 1 151 -161 714 115 0 0 chr17 21792577 21792673 -63645807 - AluSg SINE Alu -213 97 2 2223 175 27 23 chr17 21792674 21792924 -63645556 - L1MB5 LINE L1 -314 5860 5606 2285 72 0 3 chr17 21792924 21793217 -63645263 - AluY SINE Alu 0 311 20 2223 175 27 23 chr17 21793217 21793440 -63645040 - L1MB5 LINE L1 -568 5606 5385 1270 212 86 3 chr17 21793440 21793878 -63644602 + L1MC/D LINE L1 1851 2381 -4045 2486 61 0 0 chr17 21793878 21794188 -63644292 + AluY SINE Alu 1 310 -1 1270 212 86 3 chr17 21794188 21794237 -63644243 + L1MC/D LINE L1 2381 2424 -4002 5031 225 68 45 chr17 21794257 21795284 -63643196 + L1MB4 LINE L1 3951 4953 -1227 1636 170 50 0 chr17 21795284 21795408 -63643072 + AluJb SINE Alu 3 119 -193 405 0 0 0 chr17 21795408 21795453 -63643027 + (CA)n Simple_repeat Simple_repeat 2 46 0 1636 170 50 0 chr17 21795453 21795610 -63642870 + AluJb SINE Alu 119 298 -14 5031 225 68 45 chr17 21795610 21795921 -63642559 + L1MB4 LINE L1 4953 5255 -925 2285 96 0 0 chr17 21795921 21796223 -63642257 + AluSx SINE Alu 1 302 -10 5031 225 68 45 chr17 21796223 21796719 -63641761 + L1MB4 LINE L1 5255 5860 -320 1694 164 0 14 chr17 21796719 21797005 -63641475 + AluJb SINE Alu 12 293 -19 5031 225 68 45 chr17 21797005 21797332 -63641148 + L1MB4 LINE L1 5860 6178 -2 2582 7 3 3 chr17 21797332 21797626 -63640854 + AluYb8 SINE Alu 19 312 -6 4153 212 64 13 chr17 21797661 21799261 -63639219 + L1MC/D LINE L1 4285 5957 -667 1351 117 33 58 chr17 21799295 21799554 -63638926 - L1MB4 LINE L1 -34 6146 5892 416 213 21 0 chr17 21800055 21800149 -63638331 + L1M4 LINE L1 5357 5452 -726 1355 201 33 27 chr17 21800149 21800448 -63638032 + AluSx SINE Alu 1 301 -11 1207 114 0 0 chr17 21800581 21800748 -63637732 + AluSq SINE Alu 132 298 -15 2205 75 0 0 chr17 21801069 21801381 -63637099 - AluY SINE Alu 0 312 1 2112 84 0 11 chr17 21802715 21803036 -63635444 + AluY SINE Alu 1 318 0 2364 49 10 33 chr17 21803654 21803960 -63634520 + AluY SINE Alu 1 299 -12 1333 93 0 0 chr17 21804531 21804713 -63633767 - AluY SINE Alu -11 300 119 815 187 13 7 chr17 21804827 21804982 -63633498 + Tigger7 DNA MER2_type 2326 2481 -10 2141 93 10 0 chr17 21805128 21805417 -63633063 - AluSx SINE Alu -20 292 1 22 0 0 0 chr17 21806937 21806959 -63631521 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr17 21807087 21807124 -63631356 + AT_rich Low_complexity Low_complexity 1 37 0 396 108 0 0 chr17 21807227 21807292 -63631188 - L1MA7 LINE L1 -4 6287 6223 1685 99 11 75 chr17 21807404 21807868 -63630612 - SVA Other Other -520 866 433 5247 62 36 54 chr17 21807881 21808847 -63629633 - SVA Other Other -518 868 57 618 26 0 0 chr17 21808847 21808923 -63629557 + (GGGAGA)n Simple_repeat Simple_repeat 1 76 0 706 309 86 52 chr17 21808923 21809305 -63629175 - L1M4 LINE L1 -2377 3769 3375 392 286 195 43 chr17 21809977 21810393 -63628087 + L2 LINE L2 2825 3303 -10 741 151 0 17 chr17 21810976 21811095 -63627385 + FLAM_C SINE Alu 1 117 -16 1745 102 0 51 chr17 21811341 21811616 -63626864 - AluSg SINE Alu -8 302 42 317 234 191 14 chr17 21811973 21812114 -63626366 + MIR3 SINE MIR 33 198 -10 360 217 217 0 chr17 21812129 21812267 -63626213 + MER5A DNA MER1_type 4 171 -18 435 341 58 5 chr17 21812597 21812802 -63625678 + MIR SINE MIR 32 247 -15 458 148 20 40 chr17 21813181 21813205 -63625275 - AluS SINE Alu -213 100 77 225 0 0 0 chr17 21813215 21813240 -63625240 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1639 86 5 0 chr17 21813240 21813451 -63625029 - AluSp SINE Alu -29 284 70 1360 161 119 75 chr17 21813455 21813884 -63624596 - LTR7 LTR ERV1 -2 448 1 458 148 20 40 chr17 21813884 21813955 -63624525 - AluS SINE Alu -239 74 2 1425 151 0 4 chr17 21813960 21814192 -63624288 - AluJb SINE Alu -16 296 66 4046 172 23 63 chr17 21814551 21815551 -63622929 + LTR5 LTR ERVK 1 960 -9 1399 183 5 46 chr17 21815882 21816249 -63622231 - L1M4 LINE L1 -2929 3217 2866 404 57 19 0 chr17 21816249 21816302 -63622178 + Alu SINE Alu 1 54 -246 232 248 0 48 chr17 21817071 21817196 -63621284 + C-rich Low_complexity Low_complexity 5 123 0 1954 104 3 3 chr17 21817612 21817901 -63620579 + AluJo SINE Alu 3 291 -21 2204 95 0 13 chr17 21817908 21818224 -63620256 + AluSx SINE Alu 1 312 0 1535 127 0 28 chr17 21820312 21820564 -63617916 - AluSg/x SINE Alu 0 312 68 990 136 0 7 chr17 21820759 21820921 -63617559 + AluSg/x SINE Alu 142 295 -15 1188 247 116 65 chr17 21820941 21821955 -63616525 - HAL1 LINE L1 -637 1870 818 2225 110 3 22 chr17 21822702 21823020 -63615460 - AluSx SINE Alu 0 312 1 249 197 82 49 chr17 21823476 21823537 -63614943 - MIR SINE MIR -25 237 175 289 333 78 0 chr17 21823756 21823846 -63614634 - MIR3 SINE MIR -102 106 10 1708 95 0 5 chr17 21824257 21824467 -63614013 - AluSx SINE Alu -103 209 1 342 200 0 0 chr17 21824574 21824639 -63613841 + L1MEc LINE L1 265 329 -6278 309 182 78 26 chr17 21824669 21824746 -63613734 + L1MC4 LINE L1 1992 2072 -4354 344 194 80 20 chr17 21824774 21824883 -63613597 + L1MC4 LINE L1 1983 6983 -1339 339 242 40 40 chr17 21824804 21824903 -63613577 - L1MC4 LINE L1 -1340 6702 6604 * 1328 171 63 0 chr17 21824927 21825149 -63613331 + AluJo SINE Alu 60 295 -17 3398 247 67 25 chr17 21825149 21825385 -63613095 + L1MEc LINE L1 340 565 -6042 2352 101 3 0 chr17 21825385 21825681 -63612799 + AluSx SINE Alu 1 297 -15 3398 247 67 25 chr17 21825681 21826621 -63611859 + L1MEc LINE L1 565 1566 -5041 701 315 250 18 chr17 21826635 21827343 -63611137 - L3 LINE CR1 -42 1535 664 739 313 156 30 chr17 21827344 21828041 -63610439 + L2 LINE L2 606 1390 -1924 5924 200 53 52 chr17 21828041 21828538 -63609942 - L1M4 LINE L1 -4870 1672 1177 1800 137 10 83 chr17 21828538 21828852 -63609628 + AluJo SINE Alu 1 291 -21 5924 200 53 52 chr17 21828852 21829272 -63609208 - L1M4 LINE L1 -5365 1177 759 2312 109 0 3 chr17 21829272 21829576 -63608904 - AluSx SINE Alu -9 303 1 5924 200 53 52 chr17 21829576 21830220 -63608260 - L1M4 LINE L1 -5783 759 105 1751 171 0 33 chr17 21830220 21830519 -63607961 - AluJo SINE Alu -23 289 1 5924 200 53 52 chr17 21830519 21830562 -63607918 - L1M4 LINE L1 -6437 105 64 643 232 39 24 chr17 21830536 21830743 -63607737 - L1M4 LINE L1 -5407 1135 926 * 236 186 0 0 chr17 21830754 21830797 -63607683 - L1M4 LINE L1 -5684 596 554 369 291 110 50 chr17 21830854 21831191 -63607289 - L1M4 LINE L1 -5987 397 41 239 267 79 40 chr17 21831982 21832083 -63606397 - L3 LINE CR1 -393 1184 1080 241 308 132 0 chr17 21832753 21832844 -63605636 - L2 LINE L2 -2 3270 3168 2407 93 0 10 chr17 21833081 21833393 -63605087 + AluSg SINE Alu 1 309 -1 1884 137 10 7 chr17 21833521 21833813 -63604667 + AluJb SINE Alu 3 295 -17 233 200 0 0 chr17 21833941 21833986 -63604494 + Alu SINE Alu 87 131 -171 242 289 0 44 chr17 21833988 21834078 -63604402 - MLT1L LTR MaLR -387 228 143 2333 99 17 0 chr17 21834149 21834451 -63604029 + AluSg SINE Alu 1 307 -3 2266 108 17 0 chr17 21834460 21834756 -63603724 + AluSx SINE Alu 1 301 -11 2402 77 0 32 chr17 21834766 21835077 -63603403 + AluSx SINE Alu 1 301 -11 1942 184 105 5 chr17 21835293 21835732 -63602748 + MLT1D LTR MaLR 9 491 -14 25 31 0 0 chr17 21835826 21835858 -63602622 + AT_rich Low_complexity Low_complexity 1 32 0 946 128 0 7 chr17 21835969 21836110 -63602370 + FLAM_C SINE Alu 1 140 -3 261 295 46 17 chr17 21836110 21836283 -63602197 + L1M4 LINE L1 3734 3911 -2235 22 0 0 0 chr17 21836283 21836305 -63602175 + AT_rich Low_complexity Low_complexity 1 22 0 1808 146 0 67 chr17 21836305 21836440 -63602040 + AluJb SINE Alu 5 147 -165 2162 109 26 26 chr17 21836440 21836752 -63601728 + AluSp SINE Alu 1 312 -1 1808 146 0 67 chr17 21836752 21836932 -63601548 + AluJb SINE Alu 147 299 -13 212 182 23 0 chr17 21837043 21837087 -63601393 + L2 LINE L2 1274 1318 -1996 934 193 0 0 chr17 21837219 21837385 -63601095 - FRAM SINE Alu 0 40 1 403 173 0 0 chr17 21837602 21837673 -63600807 - L1MC3 LINE L1 -589 7406 7121 516 316 61 58 chr17 21837688 21837861 -63600619 - L1M4 LINE L1 -1736 4410 4234 934 118 0 8 chr17 21837861 21837988 -63600492 - FLAM_C SINE Alu -7 126 1 516 316 61 58 chr17 21837988 21838140 -63600340 - L1M4 LINE L1 -1912 4234 4084 2303 68 34 0 chr17 21838599 21838895 -63599585 - AluSc SINE Alu -3 306 1 190 239 22 0 chr17 21839150 21839196 -63599284 - MIR SINE MIR -68 140 94 34 55 0 0 chr17 21839731 21839786 -63598694 + GC_rich Low_complexity Low_complexity 1 55 0 2302 118 0 0 chr17 21841116 21841420 -63597060 + AluSx SINE Alu 1 304 -8 2052 66 0 52 chr17 21841428 21841699 -63596781 + AluSc SINE Alu 1 257 -52 290 216 26 121 chr17 21841781 21841897 -63596583 + MIR SINE MIR 79 183 -79 1450 136 148 4 chr17 21841912 21842189 -63596291 - AluJo SINE Alu 0 313 1 347 60 20 0 chr17 21842200 21842250 -63596230 + (TAA)n Simple_repeat Simple_repeat 1 51 0 200 252 16 130 chr17 21843817 21843940 -63594540 + L2 LINE L2 2951 3059 -213 262 119 269 15 chr17 21844018 21844085 -63594395 - Tigger5 DNA MER2_type 0 2323 2240 1666 244 47 2 chr17 21844092 21844494 -63593986 - Tigger5 DNA MER2_type -1884 439 20 251 284 23 11 chr17 21844627 21844715 -63593765 + MIR3 SINE MIR 93 181 -27 1434 149 112 22 chr17 21844909 21845178 -63593302 - AluJo SINE Alu -19 293 1 2257 102 0 7 chr17 21845460 21845754 -63592726 - AluSx SINE Alu -20 292 1 273 29 0 0 chr17 21846813 21846847 -63591633 + (CA)n Simple_repeat Simple_repeat 2 35 0 2421 88 0 0 chr17 21847814 21848108 -63590372 + AluSg SINE Alu 1 294 -16 624 202 16 0 chr17 21848502 21848631 -63589849 - MLT1D LTR MaLR 0 505 375 362 236 22 0 chr17 21848641 21848730 -63589750 - MLT1D LTR MaLR -414 91 1 2168 120 0 0 chr17 21848738 21849060 -63589420 - AluSx SINE Alu 0 322 1 2443 97 0 0 chr17 21849070 21849378 -63589102 - AluSx SINE Alu -4 308 1 2046 124 37 3 chr17 21849913 21850211 -63588269 - AluSg SINE Alu -1 309 2 1918 148 42 42 chr17 21850843 21851169 -63587311 - LTR26B LTR ERV1 0 531 206 2333 92 3 0 chr17 21851169 21851461 -63587019 - AluSg SINE Alu -17 293 1 1854 174 7 3 chr17 21851466 21851759 -63586721 - AluJb SINE Alu -18 294 1 1918 148 42 42 chr17 21851759 21851804 -63586676 - LTR26B LTR ERV1 -328 203 154 432 196 57 48 chr17 21851906 21852051 -63586429 - L1 LINE L1 -873 5273 5111 2894 3 0 0 chr17 21852100 21852404 -63586076 + AluY SINE Alu 1 304 -7 183 281 203 47 chr17 21853097 21853225 -63585255 - MIR3 SINE MIR -60 148 1 2234 135 0 0 chr17 21853241 21853553 -63584927 - AluSx SINE Alu 0 312 1 2003 137 0 26 chr17 21853858 21854165 -63584315 - AluJb SINE Alu -13 299 1 653 312 64 9 chr17 21854634 21854852 -63583628 + MIR SINE MIR 3 232 -30 446 317 49 31 chr17 21854910 21855021 -63583459 - L2 LINE L2 -96 3217 3109 2242 116 7 0 chr17 21855021 21855323 -63583157 + AluSq SINE Alu 1 304 -9 446 317 49 31 chr17 21855323 21855435 -63583045 - L2 LINE L2 -204 3109 2990 366 313 92 36 chr17 21855587 21855836 -63582644 - L2 LINE L2 -621 2693 2431 208 50 0 50 chr17 21855899 21855939 -63582541 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 423 0 0 0 chr17 21855993 21856040 -63582440 + (CA)n Simple_repeat Simple_repeat 2 48 0 385 164 14 14 chr17 21858775 21858848 -63579632 - MER5A DNA MER1_type -2 187 115 485 261 30 42 chr17 21858848 21859013 -63579467 + MER63 DNA MER1_type 1 789 -273 1813 168 28 0 chr17 21859041 21859327 -63579153 - AluJo SINE Alu -18 294 1 706 96 0 0 chr17 21859331 21859425 -63579055 - AluY SINE Alu -11 300 207 229 273 124 50 chr17 21859518 21859639 -63578841 - MER5B DNA MER1_type -45 133 4 1359 102 0 0 chr17 21859698 21859874 -63578606 - AluSg/x SINE Alu -3 309 134 704 198 11 39 chr17 21860396 21860478 -63578002 - MER5B DNA MER1_type -1 177 94 1989 121 48 3 chr17 21860478 21860768 -63577712 - AluSx SINE Alu -9 303 1 704 198 11 39 chr17 21860768 21860867 -63577613 - MER5B DNA MER1_type -84 94 1 704 175 129 29 chr17 21860919 21861090 -63577390 + MER20 DNA MER1_type 32 219 0 2079 126 10 0 chr17 21861182 21861475 -63577005 - AluSg SINE Alu -14 296 1 1287 163 10 0 chr17 21862093 21862302 -63576178 - AluJo SINE Alu -2 310 100 1805 184 3 0 chr17 21862303 21862596 -63575884 - AluJb SINE Alu -18 294 1 1497 169 111 14 chr17 21862635 21862985 -63575495 - MLT1B LTR MaLR 0 390 7 840 142 0 24 chr17 21864197 21864324 -63574156 - AluJo SINE Alu -188 124 1 188 253 93 13 chr17 21864674 21864749 -63573731 - L2 LINE L2 -3036 278 198 2433 92 13 0 chr17 21865515 21865820 -63572660 - AluSx SINE Alu -3 309 1 2380 227 61 37 chr17 21865991 21866642 -63571838 - LTR65 LTR ERV1 0 669 3 743 196 98 5 chr17 21868488 21868538 -63569942 + L1MB2 LINE L1 5632 5676 -495 2356 94 7 0 chr17 21868538 21868837 -63569643 - AluSq SINE Alu -12 301 1 743 196 98 5 chr17 21868837 21868970 -63569510 + L1MB2 LINE L1 5676 5832 -339 244 259 72 50 chr17 21869278 21869540 -63568940 - L1ME LINE L1 -222 5899 5632 208 220 100 80 chr17 21869586 21869686 -63568794 + MIR SINE MIR 82 183 -79 1655 168 13 69 chr17 21870158 21870432 -63568048 - L1MC4 LINE L1 -407 7635 7386 1597 176 79 3 chr17 21870432 21870722 -63567758 - AluJo SINE Alu 0 312 1 1655 168 13 69 chr17 21870722 21870823 -63567657 - L1MC4 LINE L1 -656 7386 7281 984 249 40 20 chr17 21871022 21871271 -63567209 - MIR SINE MIR 0 262 9 1030 141 0 76 chr17 21871354 21871502 -63566978 + FRAM SINE Alu 1 134 -178 2346 107 0 3 chr17 21871502 21871811 -63566669 - AluSx SINE Alu -4 308 1 1030 141 0 76 chr17 21871811 21871846 -63566634 + FRAM SINE Alu 134 170 -6 478 131 24 12 chr17 21872522 21872606 -63565874 + LTR65 LTR ERV1 164 248 -421 2008 96 57 0 chr17 21872606 21872886 -63565594 + AluSx SINE Alu 16 311 -1 2027 110 0 17 chr17 21872953 21873254 -63565226 + AluSx SINE Alu 1 296 -16 2500 53 0 0 chr17 21873340 21873641 -63564839 + AluY SINE Alu 1 301 -10 2026 120 3 10 chr17 21874259 21874558 -63563922 + AluSx SINE Alu 1 297 -15 1651 137 18 0 chr17 21874766 21875043 -63563437 + AluSx SINE Alu 11 292 -20 214 224 30 45 chr17 21875301 21875368 -63563112 + MER5A DNA MER1_type 38 103 -86 826 213 6 0 chr17 21875628 21875797 -63562683 + FRAM SINE Alu 1 170 -6 2461 201 40 6 chr17 21875921 21876452 -63562028 - MER89 LTR ERV1 0 559 11 902 127 35 0 chr17 21877680 21877822 -63560658 + FRAM SINE Alu 11 157 -19 190 218 73 18 chr17 21878064 21878119 -63560361 + MIR SINE MIR 121 178 -84 1850 100 18 36 chr17 21878123 21878404 -63560076 - AluSx SINE Alu -36 276 1 198 0 0 0 chr17 21878529 21878551 -63559929 + (TCCC)n Simple_repeat Simple_repeat 4 25 0 804 190 0 0 chr17 21878566 21878703 -63559777 - AluJb SINE Alu -39 273 137 346 248 26 59 chr17 21878706 21878859 -63559621 - HAL1 LINE L1 -932 1575 1428 1846 171 0 3 chr17 21878870 21879169 -63559311 - AluJo SINE Alu -14 298 1 867 220 63 29 chr17 21879236 21879587 -63558893 - LTR48B LTR ERV1 0 644 259 225 244 0 128 chr17 21879646 21879732 -63558748 - LTR48 LTR ERV1 -702 85 11 1798 154 20 3 chr17 21879809 21880114 -63558366 - AluJo SINE Alu 0 312 3 2107 101 3 26 chr17 21880209 21880517 -63557963 - AluSp SINE Alu -12 301 1 946 153 0 23 chr17 21881443 21881620 -63556860 - FRAM SINE Alu -4 172 1 1218 153 51 5 chr17 21881751 21881967 -63556513 - AluJo SINE Alu -86 226 1 964 78 8 0 chr17 21882186 21882314 -63556166 + AluSq SINE Alu 101 229 -84 276 79 0 0 chr17 21882905 21882943 -63555537 - L1MA5A LINE L1 -116 6181 6144 1310 141 0 75 chr17 21882943 21883123 -63555357 - AluJo SINE Alu -3 309 150 2089 99 39 0 chr17 21883123 21883406 -63555074 - AluSx SINE Alu -18 294 1 1310 141 0 75 chr17 21883406 21883466 -63555014 - AluJo SINE Alu -162 150 87 720 191 34 0 chr17 21883472 21883619 -63554861 - L1MA5A LINE L1 -155 6142 5991 1932 137 7 0 chr17 21883630 21883922 -63554558 - AluSx SINE Alu -18 294 1 432 278 247 0 chr17 21884401 21884595 -63553885 + MIR SINE MIR 21 262 0 2103 119 3 0 chr17 21884660 21884962 -63553518 - AluSx SINE Alu -9 303 1 1704 168 47 26 chr17 21885448 21885787 -63552693 + MER47A DNA MER2_type 20 365 -1 645 152 0 0 chr17 21885803 21885908 -63552572 - FLAM_A SINE Alu -17 125 21 2134 108 0 9 chr17 21885957 21886272 -63552208 + AluSx SINE Alu 1 312 0 2236 80 0 7 chr17 21887367 21887700 -63550780 + AluSq SINE Alu 1 331 0 902 155 0 19 chr17 21888216 21888371 -63550109 + FRAM SINE Alu 1 152 -24 26 0 0 0 chr17 21888372 21888398 -63550082 + AT_rich Low_complexity Low_complexity 1 26 0 2373 72 0 0 chr17 21888737 21889041 -63549439 + AluY SINE Alu 1 304 -7 193 304 58 14 chr17 21890557 21890626 -63547854 - L2 LINE L2 -8 3264 3193 683 143 10 38 chr17 21891517 21891665 -63546815 - L1M LINE L1 -758 5420 5274 2157 87 0 7 chr17 21891666 21891976 -63546504 - AluSx SINE Alu 0 308 1 600 246 73 45 chr17 21892488 21892708 -63545772 + MIR SINE MIR 14 239 -23 1970 78 67 7 chr17 21893087 21893369 -63545111 + AluSc SINE Alu 1 299 -10 469 231 169 46 chr17 21893480 21893769 -63544711 + L1ME4a LINE L1 5165 5489 -770 397 290 70 65 chr17 21893803 21894017 -63544463 + L1ME4a LINE L1 5679 5893 -228 2468 40 0 0 chr17 21894262 21894558 -63543922 + AluY SINE Alu 1 296 -15 2257 52 0 17 chr17 21894651 21894967 -63543513 + AluY SINE Alu 1 311 0 23 0 0 0 chr17 21895173 21895196 -63543284 + AT_rich Low_complexity Low_complexity 1 23 0 283 292 109 7 chr17 21895301 21895438 -63543042 - L1MEc LINE L1 -4722 1674 1524 2309 197 71 27 chr17 21895442 21895716 -63542764 - L1M4 LINE L1 -1424 4722 4462 2051 80 0 0 chr17 21895716 21896010 -63542470 - AluY SINE Alu 0 311 36 2309 197 71 27 chr17 21896010 21896325 -63542155 - L1M4 LINE L1 -1684 4462 4107 482 92 0 0 chr17 21896446 21896511 -63541969 + AluSq SINE Alu 2 66 -247 270 139 0 0 chr17 21896638 21896681 -63541799 + MIR SINE MIR 211 253 -9 203 354 0 0 chr17 21897101 21897183 -63541297 + C-rich Low_complexity Low_complexity 6 87 0 191 138 0 0 chr17 21897473 21897502 -63540978 + MIR SINE MIR 224 252 -10 593 154 0 77 chr17 21899477 21899672 -63538808 + CT-rich Low_complexity Low_complexity 1 180 0 282 262 213 25 chr17 21901115 21901237 -63537243 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 21901237 21901259 -63537221 + AT_rich Low_complexity Low_complexity 1 22 0 1747 128 0 4 chr17 21902005 21902278 -63536202 + AluSq SINE Alu 42 313 0 5251 205 25 3 chr17 21902278 21903478 -63535002 + L1PB3 LINE L1 4163 5388 -758 2713 158 12 79 chr17 21903483 21903657 -63534823 + L1PB3 LINE L1 5611 5795 -359 2015 101 4 4 chr17 21903657 21903935 -63534545 + AluSg SINE Alu 1 278 -32 2713 158 12 79 chr17 21903935 21904341 -63534139 + L1PB3 LINE L1 5795 6152 -2 1121 102 0 0 chr17 21904351 21904498 -63533982 + AluSq/x SINE Alu 1 147 -166 228 307 209 42 chr17 21904755 21905061 -63533419 + L3 LINE CR1 243 599 -978 673 195 0 0 chr17 21905062 21905185 -63533295 + FLAM_A SINE Alu 4 126 -7 190 340 75 11 chr17 21905300 21905394 -63533086 + L3 LINE CR1 794 893 -684 201 356 0 0 chr17 21906063 21906122 -63532358 - L2 LINE L2 -9 3304 3246 203 203 47 16 chr17 21906211 21906275 -63532205 - L2 LINE L2 -1018 2296 2231 596 232 158 20 chr17 21906763 21907017 -63531463 + L2 LINE L2 3025 3313 0 1637 98 62 4 chr17 21907654 21907898 -63530582 + AluSp SINE Alu 52 309 -4 26 30 0 0 chr17 21907923 21907956 -63530524 + AT_rich Low_complexity Low_complexity 1 33 0 789 172 0 0 chr17 21908072 21908194 -63530286 + FLAM_C SINE Alu 2 123 -20 186 43 0 0 chr17 21908195 21908218 -63530262 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 321 200 24 47 chr17 21908222 21908307 -63530173 - MLT1H1 LTR MaLR -77 478 396 704 278 163 10 chr17 21908495 21908790 -63529690 - L1ME3A LINE L1 -274 5896 5557 1183 167 21 103 chr17 21908797 21908961 -63529519 - AluSq SINE Alu 0 303 178 2009 125 0 3 chr17 21908961 21909264 -63529216 - AluSc SINE Alu -7 302 1 1183 167 21 103 chr17 21909264 21909429 -63529051 - AluSq SINE Alu -125 178 1 236 285 0 73 chr17 21909487 21909624 -63528856 + L1MEc LINE L1 1731 1857 -4539 12928 146 109 16 chr17 21909637 21911938 -63526542 + L1M4 LINE L1 21 2537 -5028 4773 161 51 30 chr17 21911924 21912112 -63526368 + L1M4 LINE L1 3133 3316 -4249 * 2104 115 0 0 chr17 21912112 21912408 -63526072 + AluSq SINE Alu 1 296 -17 4773 161 51 30 chr17 21912408 21913247 -63525233 + L1M4 LINE L1 3316 4217 -3348 1598 143 46 55 chr17 21913247 21913384 -63525096 + AluSx SINE Alu 3 140 -172 1980 137 0 0 chr17 21913384 21913677 -63524803 + AluSx SINE Alu 5 297 -15 1598 143 46 55 chr17 21913677 21913846 -63524634 + AluSx SINE Alu 140 306 -6 4773 161 51 30 chr17 21913846 21914337 -63524143 + L1M4 LINE L1 4217 4696 -2869 966 179 62 12 chr17 21914337 21914567 -63523913 + MSTD LTR MaLR 114 396 0 668 101 0 0 chr17 21914630 21914729 -63523751 + AluY SINE Alu 213 311 0 1457 223 32 52 chr17 21914748 21914963 -63523517 + L1M4 LINE L1 6042 6245 -1320 2274 115 27 27 chr17 21914963 21915338 -63523142 - THE1C LTR MaLR 0 375 1 1457 223 32 52 chr17 21915338 21915562 -63522918 + L1M4 LINE L1 6245 6472 -1093 3111 154 53 68 chr17 21915568 21916219 -63522261 + L1MCb LINE L1 724 1374 -5190 320 79 0 0 chr17 21916219 21916257 -63522223 + tRNA-Lys-AAG tRNA tRNA 1 38 -38 3111 154 53 68 chr17 21916257 21916607 -63521873 + L1MCb LINE L1 1374 1728 -4836 258 282 53 92 chr17 21916730 21916801 -63521679 - MER5A DNA MER1_type -1 188 123 2000 79 0 11 chr17 21916801 21917068 -63521412 + AluY SINE Alu 30 293 -18 258 282 53 92 chr17 21917068 21917127 -63521353 - MER5A DNA MER1_type -66 123 63 225 0 0 0 chr17 21917325 21917350 -63521130 + (A)n Simple_repeat Simple_repeat 1 25 0 524 185 0 0 chr17 21917460 21917552 -63520928 + MLT1D LTR MaLR 414 505 0 2042 150 211 19 chr17 21918357 21918784 -63519696 + LTR22 LTR ERVK 1 509 0 365 246 236 49 chr17 21918785 21918988 -63519492 + MIR SINE MIR 22 262 0 1988 142 0 10 chr17 21918990 21919292 -63519188 + AluSx SINE Alu 3 301 -11 23 33 0 0 chr17 21920786 21920816 -63517664 + AT_rich Low_complexity Low_complexity 1 30 0 2252 98 0 0 chr17 21920857 21921154 -63517326 + AluSg SINE Alu 1 297 -13 1308 276 58 15 chr17 21921878 21922288 -63516192 + LTR16B LTR ERVL 37 464 0 1860 152 3 37 chr17 21923268 21923591 -63514889 + AluJb SINE Alu 1 312 0 307 305 131 34 chr17 21924001 21924237 -63514243 - L1MC4a LINE L1 -1649 6159 5901 4792 187 122 19 chr17 21924244 21925556 -63512924 - Charlie1 DNA MER1_type -6 2755 1 422 329 61 26 chr17 21925560 21925788 -63512692 - L1MC4a LINE L1 -1905 5903 5668 954 104 0 15 chr17 21926077 21926212 -63512268 + FLAM_C SINE Alu 1 133 0 311 284 57 11 chr17 21926235 21926323 -63512157 - HAL1 LINE L1 -2379 128 37 253 169 28 28 chr17 21926411 21926482 -63511998 + (TA)n Simple_repeat Simple_repeat 1 71 0 447 270 45 34 chr17 21927495 21927673 -63510807 + MLT1J LTR MaLR 1 180 -331 312 244 35 23 chr17 21929752 21929838 -63508642 + MER119 DNA MER1_type 1 87 -496 1999 86 8 4 chr17 21929838 21930093 -63508387 + AluSq SINE Alu 38 293 -20 5171 174 18 11 chr17 21930103 21931422 -63507058 + L1MB2 LINE L1 4839 6168 -3 2362 95 3 3 chr17 21931427 21931732 -63506748 + AluSx SINE Alu 1 305 -7 1141 131 0 0 chr17 21931732 21931892 -63506588 + AluSg/x SINE Alu 134 293 -19 2385 98 3 0 chr17 21931926 21932233 -63506247 + AluY SINE Alu 1 308 -3 24 67 0 0 chr17 21932304 21932349 -63506131 + AT_rich Low_complexity Low_complexity 1 45 0 814 142 8 0 chr17 21932949 21933076 -63505404 + FLAM_C SINE Alu 1 128 -5 204 301 0 32 chr17 21933077 21933170 -63505310 - L2 LINE L2 -159 3154 3065 319 303 122 52 chr17 21933199 21933409 -63505071 + L1MC4a LINE L1 6051 6288 -1520 2366 107 0 7 chr17 21933409 21933718 -63504762 - AluSx SINE Alu -5 307 1 319 303 122 52 chr17 21933718 21933794 -63504686 + L1MC4a LINE L1 6288 6357 -1451 1114 233 52 0 chr17 21933932 21934202 -63504278 + HAL1 LINE L1 92 375 -2132 266 317 49 7 chr17 21934200 21934342 -63504138 + L1MA9 LINE L1 6083 6230 -82 * 1974 196 18 25 chr17 21934342 21934735 -63503745 - MER47B DNA MER2_type -1 417 28 1069 263 93 55 chr17 21934811 21935263 -63503217 + HAL1 LINE L1 352 820 -1687 308 174 210 18 chr17 21935279 21935446 -63503034 + HAL1 LINE L1 995 1193 -1314 410 204 124 9 chr17 21935555 21935668 -63502812 - L2 LINE L2 -1315 1999 1874 510 257 65 36 chr17 21935671 21935978 -63502502 + L1M4 LINE L1 4382 4697 -1449 294 29 0 0 chr17 21936381 21936416 -63502064 + (TA)n Simple_repeat Simple_repeat 1 35 0 1355 169 135 4 chr17 21936421 21936687 -63501793 - AluJo SINE Alu 0 302 2 694 215 0 8 chr17 21936692 21936822 -63501658 - FLAM_C SINE Alu -3 130 2 827 193 93 0 chr17 21936931 21937092 -63501388 - MER46A DNA MER2_type -60 176 1 2262 82 3 70 chr17 21937225 21937556 -63500924 - AluSg SINE Alu 0 310 2 813 36 18 27 chr17 21937733 21937845 -63500635 + L1PA4 LINE L1 6045 6155 0 180 273 18 0 chr17 21939934 21939989 -63498491 - MIR SINE MIR -3 259 204 243 69 0 0 chr17 21940008 21940037 -63498443 + AluY SINE Alu 14 42 -261 2397 54 0 4 chr17 21940037 21940316 -63498164 + AluY SINE Alu 21 298 -13 210 308 0 0 chr17 21940370 21940422 -63498058 - MIR SINE MIR -157 105 54 383 319 97 59 chr17 21940459 21940767 -63497713 + L2 LINE L2 1428 1723 -1591 2342 95 0 0 chr17 21940767 21941062 -63497418 - AluSg SINE Alu -2 308 14 383 319 97 59 chr17 21941062 21941665 -63496815 + L2 LINE L2 1723 2373 -941 2535 70 0 0 chr17 21942022 21942323 -63496157 - AluSc SINE Alu -8 301 1 809 211 0 0 chr17 21942479 21942635 -63495845 + MER3 DNA MER1_type 19 127 -82 2308 93 0 0 chr17 21943001 21943290 -63495190 + AluSx SINE Alu 1 289 -23 558 116 35 0 chr17 21943732 21943818 -63494662 - AluJ SINE Alu -25 287 199 1053 132 0 0 chr17 21943818 21943962 -63494518 - AluJ SINE Alu -168 144 1 1921 145 35 0 chr17 21943971 21944261 -63494219 - AluSx SINE Alu -12 300 1 2064 142 0 19 chr17 21944328 21944644 -63493836 - AluSx SINE Alu -2 310 1 2213 123 0 0 chr17 21944653 21944962 -63493518 - AluY SINE Alu -2 309 1 248 118 0 39 chr17 21944966 21945017 -63493463 - Alu SINE Alu 0 133 85 807 204 0 39 chr17 21945017 21945198 -63493282 - AluJo SINE Alu -92 220 47 190 204 23 0 chr17 21945550 21945594 -63492886 - MIR SINE MIR 0 262 218 208 228 148 40 chr17 21945927 21946028 -63492452 - MIR SINE MIR -27 235 124 2078 101 50 7 chr17 21946154 21946451 -63492029 + AluSx SINE Alu 1 310 -2 195 302 75 19 chr17 21946835 21946941 -63491539 - MIR SINE MIR -77 131 20 1979 116 58 0 chr17 21947404 21947679 -63490801 + AluSx SINE Alu 1 291 -21 2328 77 3 0 chr17 21947681 21948002 -63490478 + AluSp SINE Alu 1 322 0 35 63 0 0 chr17 21948330 21948393 -63490087 + AT_rich Low_complexity Low_complexity 1 63 0 2546 53 0 7 chr17 21948650 21948952 -63489528 + AluY SINE Alu 1 300 -11 234 331 96 22 chr17 21949225 21949361 -63489119 - MIR SINE MIR -80 182 37 2301 95 7 0 chr17 21949606 21949902 -63488578 + AluSp SINE Alu 1 298 -15 2379 185 105 40 chr17 21949919 21950804 -63487676 + L1M4c LINE L1 1393 2219 -4163 1304 171 167 8 chr17 21950804 21951067 -63487413 + AluSx SINE Alu 1 305 -7 2379 185 105 40 chr17 21951067 21951230 -63487250 + L1M4c LINE L1 2219 2370 -4012 1613 193 10 7 chr17 21951230 21951525 -63486955 + AluJb SINE Alu 1 296 -16 2403 90 0 10 chr17 21951532 21951833 -63486647 + AluSg SINE Alu 1 298 -12 2379 185 105 40 chr17 21951833 21952179 -63486301 + L1M4c LINE L1 2375 2697 -3685 1534 197 7 27 chr17 21952179 21952478 -63486002 - AluJo SINE Alu -19 293 1 2379 185 105 40 chr17 21952478 21952553 -63485927 + L1M4c LINE L1 2697 3058 -3324 250 132 29 29 chr17 21952612 21952680 -63485800 + L1M4c LINE L1 3045 3112 -3270 1193 153 129 69 chr17 21952682 21952722 -63485758 - THE1C LTR MaLR 0 375 339 2087 128 3 0 chr17 21952722 21953020 -63485460 + AluSx SINE Alu 1 299 -13 1193 153 129 69 chr17 21953020 21953352 -63485128 - THE1C LTR MaLR -36 339 1 1033 192 39 32 chr17 21953353 21953519 -63484961 + L1M4c LINE L1 3111 3274 -3108 2123 130 0 7 chr17 21953519 21953818 -63484662 + AluSx SINE Alu 1 297 -15 2088 134 7 13 chr17 21953820 21954125 -63484355 + AluSx SINE Alu 1 303 -9 1033 192 39 32 chr17 21954125 21954236 -63484244 + L1M4c LINE L1 3274 3393 -2989 1736 161 4 0 chr17 21954238 21954517 -63483963 - AluJb SINE Alu -5 307 28 593 235 0 0 chr17 21954551 21954670 -63483810 + AluJb SINE Alu 142 260 -52 2240 110 7 0 chr17 21955668 21955968 -63482512 + AluSg SINE Alu 1 302 -8 198 0 0 0 chr17 21956602 21956624 -63481856 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 859 287 120 28 chr17 21956624 21957166 -63481314 - L2 LINE L2 -13 3300 2715 271 164 36 0 chr17 21957221 21957276 -63481204 - LTR33A LTR ERVL -8 515 459 423 239 182 25 chr17 21957523 21957682 -63480798 - LTR50 LTR ERVL -594 201 18 1947 130 3 23 chr17 21957710 21958018 -63480462 + AluJo SINE Alu 1 302 -10 2548 114 88 26 chr17 21958054 21958741 -63479739 - MER4C-int LTR ERV1 -5752 846 1 2658 103 98 14 chr17 21958744 21959163 -63479317 - MER4C LTR ERV1 0 465 12 481 257 95 29 chr17 21959283 21959524 -63478956 - L2 LINE L2 -1123 2191 1935 328 279 34 20 chr17 21960844 21960991 -63477489 - L1M4 LINE L1 -801 5345 5197 538 128 0 23 chr17 21960996 21961082 -63477398 - HY4 scRNA scRNA -9 84 1 395 274 183 13 chr17 21961198 21961351 -63477129 - MER5A DNA MER1_type 0 189 11 2250 101 3 16 chr17 21961389 21961705 -63476775 - AluSx SINE Alu 0 312 1 879 148 7 21 chr17 21961778 21961920 -63476560 - FRAM SINE Alu -17 159 20 2407 87 0 0 chr17 21961937 21962247 -63476233 - AluY SINE Alu -1 310 1 194 222 0 0 chr17 21962718 21962754 -63475726 - L2 LINE L2 -219 3053 3018 2209 113 0 0 chr17 21964540 21964833 -63473647 - AluSx SINE Alu -15 297 5 4872 91 24 122 chr17 21964834 21965745 -63472735 - LTR12 LTR ERV1 0 826 5 2386 205 23 25 chr17 21965760 21966364 -63472116 - pTR5 LTR ERV1 -1093 1345 743 532 216 32 8 chr17 21967291 21967416 -63471064 - MIR SINE MIR -126 136 9 2167 103 0 70 chr17 21969935 21970264 -63468216 + AluSx SINE Alu 1 306 -6 2054 150 3 0 chr17 21970442 21970735 -63467745 + AluSx SINE Alu 1 294 -18 1934 165 0 3 chr17 21970756 21971053 -63467427 + AluJo SINE Alu 9 304 -8 1825 161 13 10 chr17 21971055 21971359 -63467121 + AluJb SINE Alu 1 305 -7 217 235 371 23 chr17 21971672 21971804 -63466676 - MER5B DNA MER1_type 0 178 1 * 226 337 63 11 chr17 21971804 21971889 -63466591 + MER5A DNA MER1_type 99 188 -1 604 243 29 0 chr17 21972141 21972277 -63466203 - MER58B DNA MER1_type 0 341 202 304 279 47 76 chr17 21973330 21973502 -63464978 - MLT1L LTR MaLR -2 613 447 300 247 12 37 chr17 21973647 21973728 -63464752 - MLT1L LTR MaLR -405 210 132 1636 74 5 5 chr17 21974292 21974508 -63463972 + AluSp SINE Alu 78 293 -20 347 0 23 0 chr17 21976869 21976912 -63461568 + (TG)n Simple_repeat Simple_repeat 2 45 0 407 223 121 15 chr17 21977540 21977746 -63460734 - L2 LINE L2 -653 2661 2434 225 280 75 37 chr17 21977874 21977981 -63460499 + L2 LINE L2 1893 2003 -1311 2111 106 0 3 chr17 21977987 21978328 -63460152 + AluSx SINE Alu 1 312 0 338 133 117 0 chr17 21978389 21978449 -63460031 - L1MA9 LINE L1 -174 6138 6072 25 0 0 0 chr17 21978449 21978474 -63460006 + AT_rich Low_complexity Low_complexity 1 25 0 667 236 141 19 chr17 21978612 21978925 -63459555 - L1ME4a LINE L1 -157 5964 5614 1899 154 7 0 chr17 21979046 21979351 -63459129 - AluSx SINE Alu -5 307 1 299 259 98 0 chr17 21979375 21979487 -63458993 - L1ME4a LINE L1 -516 5605 5483 380 245 245 37 chr17 21979497 21979660 -63458820 - L1ME4a LINE L1 -656 5465 5269 1925 143 0 0 chr17 21979746 21980040 -63458440 - AluSx SINE Alu -18 294 1 1669 112 124 8 chr17 21980135 21980402 -63458078 + AluSg SINE Alu 1 298 -2 22 0 0 0 chr17 21980402 21980424 -63458056 + AT_rich Low_complexity Low_complexity 1 22 0 306 308 144 53 chr17 21980452 21980507 -63457973 - L1ME4a LINE L1 -1086 5060 5011 2030 125 0 19 chr17 21980507 21980819 -63457661 + AluSx SINE Alu 1 306 -6 306 308 144 53 chr17 21980819 21981062 -63457418 - L1ME4a LINE L1 -1135 5011 4735 225 238 0 0 chr17 21981062 21981104 -63457376 - MIR SINE MIR -4 258 217 1881 151 10 26 chr17 21981120 21981432 -63457048 - AluJb SINE Alu -5 307 1 239 356 0 0 chr17 21981452 21981525 -63456955 - MIR SINE MIR -175 87 15 323 245 58 19 chr17 21981699 21981854 -63456626 - L1ME4a LINE L1 -1530 4616 4456 882 124 0 15 chr17 21981864 21982001 -63456479 - FRAM SINE Alu -6 170 36 2413 63 0 3 chr17 21982053 21982353 -63456127 - AluSc SINE Alu -10 299 1 574 284 52 26 chr17 21982740 21982969 -63455511 + MIR SINE MIR 6 240 -22 819 201 169 0 chr17 21983554 21983743 -63454737 + MER58A DNA MER1_type 4 224 0 2154 104 3 0 chr17 21984254 21984553 -63453927 + AluSg SINE Alu 1 300 -10 398 20 20 0 chr17 21984839 21984890 -63453590 + (TTTTTG)n Simple_repeat Simple_repeat 1 52 0 2187 111 0 0 chr17 21984928 21985234 -63453246 + AluSx SINE Alu 1 306 -6 305 298 0 53 chr17 21986016 21986130 -63452350 + MIR3 SINE MIR 78 185 -23 1830 158 7 3 chr17 21987864 21988161 -63450319 + AluJb SINE Alu 1 298 -14 322 352 14 7 chr17 21991062 21991207 -63447273 + MIR SINE MIR 3 148 -114 1906 142 0 7 chr17 21991688 21991983 -63446497 + AluSx SINE Alu 1 293 -19 2297 65 0 0 chr17 21992441 21992731 -63445749 + AluY SINE Alu 18 307 -4 283 317 81 12 chr17 21993210 21993371 -63445109 - MIR SINE MIR -20 242 71 2073 151 134 50 chr17 21993507 21993576 -63444904 - MLT1D LTR MaLR 0 505 443 1564 95 136 0 chr17 21993576 21993818 -63444662 + AluSx SINE Alu 1 275 -37 324 0 0 0 chr17 21993822 21993858 -63444622 + (CA)n Simple_repeat Simple_repeat 1 36 0 2073 151 134 50 chr17 21993858 21994247 -63444233 - MLT1D LTR MaLR -64 441 3 913 108 36 92 chr17 21994679 21994874 -63443606 + MER20 DNA MER1_type 36 219 0 275 320 45 26 chr17 21995168 21995324 -63443156 + L1M4 LINE L1 716 874 -5668 229 326 11 11 chr17 21995402 21995494 -63442986 + L1M4 LINE L1 875 966 -5576 * 10877 168 51 56 chr17 21995473 21995579 -63442901 + L1MA3 LINE L1 2216 2321 -4482 719 216 0 0 chr17 21995579 21995704 -63442776 - FLAM_A SINE Alu -8 125 1 10877 168 51 56 chr17 21995704 21996071 -63442409 + L1MA3 LINE L1 2321 2688 -4115 922 135 0 0 chr17 21996071 21996204 -63442276 + FLAM_C SINE Alu 1 133 0 10877 168 51 56 chr17 21996204 21996305 -63442175 + L1MA3 LINE L1 2688 2788 -4015 4442 95 21 12 chr17 21996305 21997320 -63441160 + SVA Other Other 1 1396 0 10877 168 51 56 chr17 21997320 21997471 -63441009 + L1MA3 LINE L1 2788 2938 -3865 1981 122 3 7 chr17 21997471 21997766 -63440714 + AluSq SINE Alu 1 294 -19 10877 168 51 56 chr17 21997766 21999350 -63439130 + L1MA3 LINE L1 2938 4528 -2275 303 81 0 0 chr17 21999350 21999387 -63439093 + U2 snRNA snRNA 1 37 -151 10877 168 51 56 chr17 21999387 22000083 -63438397 + L1MA3 LINE L1 4528 5226 -1577 1385 139 162 34 chr17 22000083 22000349 -63438131 - AluSx SINE Alu -1 301 2 1646 143 0 126 chr17 22000357 22000699 -63437781 - AluJo SINE Alu -3 299 1 10877 168 51 56 chr17 22000699 22000907 -63437573 + L1MA3 LINE L1 5233 5440 -1363 1976 160 0 0 chr17 22000907 22001214 -63437266 + AluJb SINE Alu 1 307 -5 10877 168 51 56 chr17 22001214 22002329 -63436151 + L1MA3 LINE L1 5440 6042 -761 2201 74 3 17 chr17 22002329 22002628 -63435852 + AluSp SINE Alu 1 295 -18 10877 168 51 56 chr17 22002628 22003387 -63435093 + L1MA3 LINE L1 6042 6803 0 6056 219 52 56 chr17 22003376 22003445 -63435035 + L1M4 LINE L1 3161 3229 -2917 * 2177 107 0 0 chr17 22003445 22003745 -63434735 + AluSg SINE Alu 6 305 -5 6056 219 52 56 chr17 22003745 22004343 -63434137 + L1M4 LINE L1 3229 3828 -2318 2140 108 0 0 chr17 22004343 22004631 -63433849 + AluSc SINE Alu 1 288 -21 6056 219 52 56 chr17 22004631 22004983 -63433497 + L1M4 LINE L1 3828 4180 -1966 1907 119 14 0 chr17 22004983 22005100 -63433380 + AluSx SINE Alu 1 115 -197 237 33 0 0 chr17 22005100 22005130 -63433350 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1907 119 14 0 chr17 22005130 22005307 -63433173 + AluSx SINE Alu 115 299 -13 6056 219 52 56 chr17 22005307 22006128 -63432352 + L1M4 LINE L1 4180 4998 -1148 2260 88 0 0 chr17 22006128 22006424 -63432056 + AluSg SINE Alu 1 296 -14 6056 219 52 56 chr17 22006424 22006624 -63431856 + L1M4 LINE L1 4998 5197 -949 1009 115 142 40 chr17 22006599 22006825 -63431655 + L1MA8 LINE L1 6017 6265 -26 * 926 158 35 6 chr17 22006833 22007004 -63431476 + FRAM SINE Alu 1 40 0 23 0 0 0 chr17 22007056 22007079 -63431401 + AT_rich Low_complexity Low_complexity 1 23 0 559 83 94 10 chr17 22007079 22007175 -63431305 + L1M4 LINE L1 5195 5298 -848 1803 165 74 85 chr17 22007175 22007220 -63431260 + MLT1C LTR MaLR 1 45 -422 1934 138 3 3 chr17 22007220 22007516 -63430964 - AluSq SINE Alu -17 296 1 1803 165 74 85 chr17 22007516 22007663 -63430817 + MLT1C LTR MaLR 45 192 -275 2038 104 3 39 chr17 22007663 22007971 -63430509 + AluSc SINE Alu 1 297 -12 1803 165 74 85 chr17 22007971 22008237 -63430243 + MLT1C LTR MaLR 192 455 -12 1477 189 26 8 chr17 22008237 22008502 -63429978 - MSTD LTR MaLR 0 396 127 2142 81 0 24 chr17 22008502 22008800 -63429680 + AluY SINE Alu 1 291 -20 610 193 0 0 chr17 22008847 22008956 -63429524 + FLAM_C SINE Alu 35 143 0 305 172 234 0 chr17 22008956 22009020 -63429460 - MSTD LTR MaLR -317 79 1 1399 204 0 32 chr17 22009074 22009387 -63429093 - AluJo SINE Alu -9 303 1 480 293 64 0 chr17 22009395 22009552 -63428928 + L1M4 LINE L1 5315 5481 -693 688 233 43 0 chr17 22009562 22009725 -63428755 + L1ME1 LINE L1 4606 4775 -1371 1804 144 7 13 chr17 22009841 22010147 -63428333 - AluSx SINE Alu -8 304 1 404 158 61 0 chr17 22010185 22010267 -63428213 - L1MB2 LINE L1 0 6171 6085 1208 171 21 1 chr17 22010267 22010563 -63427917 - MER2 DNA MER2_type -1 344 2 999 215 93 23 chr17 22010564 22010866 -63427614 + L1ME1 LINE L1 4774 5096 -1050 1474 151 0 76 chr17 22010867 22011171 -63427309 - AluJo SINE Alu -7 305 25 2156 213 75 9 chr17 22011210 22011759 -63426721 + L1ME1 LINE L1 5578 6162 -4 1871 139 7 13 chr17 22011972 22012274 -63426206 + AluJo SINE Alu 1 300 -12 2311 92 0 7 chr17 22012376 22012681 -63425799 + AluSx SINE Alu 1 303 -9 607 168 0 0 chr17 22013191 22013286 -63425194 + AluJo SINE Alu 1 95 -217 1392 111 0 39 chr17 22013408 22013616 -63424864 + AluJo SINE Alu 98 297 -15 216 191 235 0 chr17 22013961 22014029 -63424451 - MIR SINE MIR -18 244 161 798 179 49 22 chr17 22014875 22015059 -63423421 + MER5A DNA MER1_type 1 189 0 531 198 95 86 chr17 22016172 22016315 -63422165 - Charlie8 DNA MER1_type -2122 295 148 2096 110 10 3 chr17 22016315 22016614 -63421866 - AluSg SINE Alu -9 301 1 531 198 95 86 chr17 22016614 22016702 -63421778 - Charlie8 DNA MER1_type -2269 148 62 1936 133 7 3 chr17 22017090 22017391 -63421089 - AluJb SINE Alu -10 302 1 261 307 80 7 chr17 22017533 22017670 -63420810 + MIR3 SINE MIR 2 148 -60 334 280 160 0 chr17 22018817 22018942 -63419538 + MIR SINE MIR 91 235 -27 727 236 52 82 chr17 22020931 22021198 -63417282 + MIR SINE MIR 2 260 -2 348 298 189 45 chr17 22021842 22021951 -63416529 + L1ME4a LINE L1 4975 5067 -1079 2363 78 0 0 chr17 22021951 22022245 -63416235 - AluSq SINE Alu -19 294 1 348 298 189 45 chr17 22022245 22022307 -63416173 + L1ME4a LINE L1 5067 5119 -1027 2131 99 20 0 chr17 22022307 22022601 -63415879 - AluSp SINE Alu -13 300 1 348 298 189 45 chr17 22022601 22022740 -63415740 + L1ME4a LINE L1 5119 5331 -815 334 292 165 34 chr17 22022759 22022802 -63415678 + L1ME4a LINE L1 5379 5415 -706 2343 94 10 0 chr17 22022802 22023111 -63415369 + AluSx SINE Alu 1 312 0 334 292 165 34 chr17 22023111 22023597 -63414883 + L1ME4a LINE L1 5415 6013 -108 2247 86 3 3 chr17 22023597 22023887 -63414593 + AluSx SINE Alu 1 290 -22 334 292 165 34 chr17 22023887 22024010 -63414470 + L1ME4a LINE L1 6013 6118 -3 29 0 0 0 chr17 22024566 22024595 -63413885 + AT_rich Low_complexity Low_complexity 1 29 0 2248 82 0 3 chr17 22024600 22024908 -63413572 + AluSc SINE Alu 1 307 0 269 250 52 9 chr17 22027040 22027156 -63411324 + L1ME4a LINE L1 5966 6086 -35 2197 89 3 3 chr17 22027186 22027499 -63410981 - AluSq SINE Alu 0 313 1 197 262 33 0 chr17 22028488 22028549 -63409931 - MIR SINE MIR -104 104 42 294 278 117 43 chr17 22031780 22031942 -63406538 - MLT1H LTR MaLR -374 181 8 204 173 58 0 chr17 22031946 22031998 -63406482 + CT-rich Low_complexity Low_complexity 2 56 0 256 286 13 0 chr17 22032795 22032872 -63405608 + CT-rich Low_complexity Low_complexity 2 79 0 2698 142 69 32 chr17 22033091 22033626 -63404854 + L1MC2 LINE L1 5789 6343 -1 2407 145 10 64 chr17 22033723 22034179 -63404301 + L1MB8 LINE L1 5703 6131 -47 2329 52 0 45 chr17 22034179 22034487 -63403993 + AluY SINE Alu 1 294 -17 2407 145 10 64 chr17 22034487 22034527 -63403953 + L1MB8 LINE L1 6131 6172 -6 303 93 0 0 chr17 22034917 22034960 -63403520 + (A)n Simple_repeat Simple_repeat 1 43 0 2847 6 0 0 chr17 22035031 22035345 -63403135 - AluYb8 SINE Alu -4 314 1 788 234 65 9 chr17 22035353 22035567 -63402913 - L1ME3A LINE L1 0 6170 5945 226 258 112 0 chr17 22035634 22035723 -63402757 - MLT1L LTR MaLR -476 139 41 335 314 111 34 chr17 22036905 22036999 -63401481 + MIR SINE MIR 40 125 -137 3136 156 26 26 chr17 22036999 22037519 -63400961 + L1MB2 LINE L1 5604 6126 -45 2149 103 0 17 chr17 22037519 22037821 -63400659 - AluSx SINE Alu -15 297 1 3136 156 26 26 chr17 22037821 22037865 -63400615 + L1MB2 LINE L1 6125 6168 -3 335 314 111 34 chr17 22037865 22037977 -63400503 + MIR SINE MIR 125 262 0 237 180 0 0 chr17 22038166 22038216 -63400264 + GA-rich Low_complexity Low_complexity 3 52 0 583 270 75 17 chr17 22038348 22038568 -63399912 - MIR SINE MIR -20 242 16 310 250 0 0 chr17 22038666 22038734 -63399746 + MER117 DNA MER1_type 112 179 -18 311 346 148 0 chr17 22040068 22040230 -63398250 - MIR SINE MIR 0 262 77 2206 93 0 19 chr17 22040395 22040705 -63397775 + AluSg SINE Alu 1 304 -6 2185 99 3 0 chr17 22040853 22041147 -63397333 - AluSq SINE Alu -18 295 1 579 87 0 29 chr17 22041685 22041788 -63396692 + MLT1A1 LTR MaLR 1 100 -265 811 91 0 50 chr17 22041824 22041945 -63396535 + AluSq/x SINE Alu 21 135 -177 2286 113 0 0 chr17 22041945 22042255 -63396225 + AluSx SINE Alu 1 310 -2 183 265 118 0 chr17 22042274 22042342 -63396138 + MER5B DNA MER1_type 59 134 -44 1975 122 7 0 chr17 22043537 22043824 -63394656 - AluSx SINE Alu 0 312 24 213 336 21 86 chr17 22044325 22044465 -63394015 - L3b LINE CR1 -276 1307 1177 184 268 36 0 chr17 22044545 22044601 -63393879 + MIR SINE MIR 88 145 -63 1767 148 38 0 chr17 22044604 22044895 -63393585 + AluJb SINE Alu 7 308 -4 210 346 115 8 chr17 22045090 22045220 -63393260 - L3 LINE CR1 -532 1045 902 2025 142 0 13 chr17 22045222 22045532 -63392948 + AluSx SINE Alu 1 306 -6 454 300 66 40 chr17 22045622 22045849 -63392631 - L2 LINE L2 -1 3312 3080 202 244 146 12 chr17 22045928 22046010 -63392470 - L2 LINE L2 -474 2840 2748 1727 193 10 0 chr17 22046018 22046324 -63392156 - AluJb SINE Alu -3 309 1 1464 172 97 30 chr17 22046325 22046652 -63391828 - MER67C LTR ERV1 -321 389 34 1766 171 3 20 chr17 22046652 22046957 -63391523 - AluJo SINE Alu -11 301 2 1464 172 97 30 chr17 22046957 22046990 -63391490 - MER67C LTR ERV1 -676 34 5 759 320 123 5 chr17 22046996 22047279 -63391201 - L2 LINE L2 -601 2713 2360 2235 107 0 0 chr17 22047279 22047578 -63390902 + AluSg SINE Alu 1 299 -11 759 320 123 5 chr17 22047578 22047725 -63390755 - L2 LINE L2 -954 2360 2232 203 337 102 44 chr17 22047731 22048075 -63390405 - L2 LINE L2 -1251 2063 1700 1888 144 16 16 chr17 22048076 22048388 -63390092 - AluJo SINE Alu 0 312 1 339 234 144 9 chr17 22050201 22050312 -63388168 + MIR3 SINE MIR 52 177 -31 463 353 0 0 chr17 22050836 22050969 -63387511 - MIR SINE MIR -102 160 28 281 229 49 49 chr17 22052045 22052140 -63386340 + L1ME4a LINE L1 5999 6096 -25 1760 157 0 47 chr17 22052140 22052458 -63386022 - AluJo SINE Alu -9 303 1 281 229 49 49 chr17 22052458 22052484 -63385996 + L1ME4a LINE L1 6095 6120 -1 245 294 261 5 chr17 22053219 22053437 -63385043 + L2 LINE L2 2951 3224 -48 2097 107 3 19 chr17 22055608 22055925 -63382555 + AluSx SINE Alu 1 312 0 213 200 11 78 chr17 22056227 22056317 -63382163 + G-rich Low_complexity Low_complexity 4 87 0 1864 91 0 30 chr17 22057595 22057858 -63380622 + AluSq SINE Alu 1 255 -58 239 73 49 0 chr17 22058026 22058067 -63380413 + GA-rich Low_complexity Low_complexity 2 44 0 867 140 0 0 chr17 22058097 22058240 -63380240 + (TG)n Simple_repeat Simple_repeat 1 143 0 388 277 41 82 chr17 22059279 22059474 -63379006 - MIR SINE MIR -74 188 2 206 331 69 23 chr17 22060594 22060724 -63377756 + L2 LINE L2 2750 2885 -429 215 290 142 30 chr17 22060741 22060910 -63377570 + L2 LINE L2 3126 3313 0 183 248 74 83 chr17 22061786 22061907 -63376573 - L2 LINE L2 -2583 731 612 1751 132 61 0 chr17 22062009 22062289 -63376191 - AluJb SINE Alu 0 312 16 666 324 108 27 chr17 22062313 22062913 -63375567 + L2 LINE L2 2560 3207 -65 225 0 0 0 chr17 22063039 22063064 -63375416 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1143 129 43 69 chr17 22063149 22063203 -63375277 + AluJo SINE Alu 87 141 -171 2367 79 3 10 chr17 22063203 22063508 -63374972 + AluSx SINE Alu 1 303 -9 1143 129 43 69 chr17 22063508 22063685 -63374795 + AluJo SINE Alu 141 312 0 911 165 16 6 chr17 22063736 22063918 -63374562 + L1MA4 LINE L1 5893 6076 -224 1495 172 4 4 chr17 22063918 22064174 -63374306 + AluJo SINE Alu 1 256 -56 446 293 234 32 chr17 22065528 22065905 -63372575 - L1M4 LINE L1 -757 5389 4942 2311 107 0 0 chr17 22065907 22066216 -63372264 - AluSg1 SINE Alu 0 309 1 861 211 66 9 chr17 22066269 22066482 -63371998 - MIR SINE MIR 0 262 38 406 359 53 19 chr17 22067961 22068167 -63370313 - L1M4 LINE L1 -3532 2614 2402 1158 110 62 73 chr17 22069938 22069978 -63368502 + L1MB3 LINE L1 5787 5826 -357 1337 179 126 8 chr17 22069978 22070240 -63368240 + AluJo SINE Alu 1 293 -9 2186 124 3 0 chr17 22070247 22070553 -63367927 + AluSx SINE Alu 1 307 -5 1158 110 62 73 chr17 22070553 22070776 -63367704 + L1MB3 LINE L1 5832 6055 -128 767 101 0 9 chr17 22070780 22070889 -63367591 + AluSp SINE Alu 1 108 -205 187 284 218 3 chr17 22071532 22071835 -63366645 + L2 LINE L2 207 574 -2740 3477 164 48 5 chr17 22072132 22072801 -63365679 - L1MB3 LINE L1 -1 6182 5485 2300 103 0 7 chr17 22073002 22073303 -63365177 + AluSx SINE Alu 1 299 -13 330 26 0 0 chr17 22073419 22073458 -63365022 + (TCC)n Simple_repeat Simple_repeat 2 40 0 297 299 20 13 chr17 22074136 22074355 -63364125 - ERVL LTR ERVL -1438 4326 4032 264 304 99 56 chr17 22074590 22074751 -63363729 + LTR67 LTR ERVL 121 288 -269 271 160 85 85 chr17 22074822 22074916 -63363564 + LTR67 LTR ERVL 434 527 -30 901 213 167 62 chr17 22074935 22075419 -63363061 + MLT1H LTR MaLR 15 549 0 2276 106 3 0 chr17 22075625 22075927 -63362553 + AluSx SINE Alu 1 303 -9 553 219 0 0 chr17 22076125 22076239 -63362241 + MIR SINE MIR 19 132 -130 2225 101 14 0 chr17 22076285 22076581 -63361899 + AluSq SINE Alu 1 300 -13 498 239 62 34 chr17 22076637 22076813 -63361667 - L2 LINE L2 -14 3299 3119 2393 106 0 0 chr17 22077260 22077563 -63360917 - AluSq SINE Alu -10 303 1 334 276 122 30 chr17 22078659 22078834 -63359646 - MIR SINE MIR -8 254 65 2197 111 13 3 chr17 22078935 22079242 -63359238 + AluSx SINE Alu 1 310 -2 754 194 69 7 chr17 22079248 22079392 -63359088 + Tigger7 DNA MER2_type 77 229 -321 501 211 9 26 chr17 22079397 22079511 -63358969 + Tigger7 DNA MER2_type 2376 2487 0 373 235 37 0 chr17 22079511 22079591 -63358889 + MER58B DNA MER1_type 259 341 0 213 363 30 0 chr17 22080038 22080173 -63358307 - MIR SINE MIR -38 224 86 2261 92 18 0 chr17 22080440 22080724 -63357756 + AluSx SINE Alu 1 289 -23 225 0 0 0 chr17 22080725 22080750 -63357730 + (CA)n Simple_repeat Simple_repeat 2 26 0 1003 149 6 40 chr17 22080750 22080924 -63357556 + AluSg/x SINE Alu 131 298 -14 1854 131 4 11 chr17 22080991 22081265 -63357215 + AluSx SINE Alu 22 293 -19 228 254 189 41 chr17 22082675 22082797 -63355683 + MIR SINE MIR 59 198 -64 393 291 140 0 chr17 22083083 22083262 -63355218 - MIR SINE MIR -15 247 44 2436 50 20 3 chr17 22084194 22084493 -63353987 + AluY SINE Alu 3 306 -5 1866 121 68 11 chr17 22084506 22084787 -63353693 + AluSg SINE Alu 1 297 -13 189 283 43 33 chr17 22085850 22085942 -63352538 + MIR SINE MIR 55 147 -115 25 0 0 0 chr17 22086029 22086054 -63352426 + AT_rich Low_complexity Low_complexity 1 25 0 238 200 55 0 chr17 22088447 22088502 -63349978 - MIR SINE MIR -51 211 154 480 170 0 0 chr17 22088506 22088612 -63349868 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 2056 129 0 0 chr17 22088618 22088897 -63349583 - AluSx SINE Alu -33 279 1 284 252 193 8 chr17 22088898 22089017 -63349463 - MIR SINE MIR -114 148 8 285 127 18 18 chr17 22089650 22089705 -63348775 - L2 LINE L2 0 3313 3259 786 187 0 0 chr17 22090123 22090246 -63348234 - FLAM_A SINE Alu -10 123 1 2277 122 0 3 chr17 22090742 22091053 -63347427 + AluSx SINE Alu 2 311 -1 2297 114 7 0 chr17 22091384 22091691 -63346789 + AluSx SINE Alu 1 309 -3 1928 148 6 31 chr17 22092726 22093044 -63345436 - AluJb SINE Alu -2 310 1 2201 110 0 0 chr17 22094126 22094452 -63344028 + AluSx SINE Alu 1 326 0 2334 79 0 3 chr17 22094677 22094967 -63343513 + AluSg SINE Alu 15 303 -7 25 0 0 0 chr17 22095723 22095748 -63342732 + AT_rich Low_complexity Low_complexity 1 25 0 2169 135 6 6 chr17 22096006 22096318 -63342162 - AluJb SINE Alu 0 312 1 26 0 0 0 chr17 22096679 22096705 -63341775 + AT_rich Low_complexity Low_complexity 1 26 0 2107 120 7 17 chr17 22096709 22097009 -63341471 - AluSq SINE Alu -16 297 1 286 270 29 27 chr17 22097185 22097367 -63341113 - MIR SINE MIR -9 253 75 2429 98 0 0 chr17 22097929 22098235 -63340245 + AluSx SINE Alu 6 311 -1 500 237 9 7 chr17 22098236 22098371 -63340109 + L1MEc LINE L1 1656 1790 -4594 2308 82 34 0 chr17 22098487 22098779 -63339701 - AluSc SINE Alu -7 302 1 953 163 6 6 chr17 22098783 22098943 -63339537 - FRAM SINE Alu -16 160 1 241 285 0 73 chr17 22099002 22099139 -63339341 + L1MEc LINE L1 1898 2024 -4539 12862 146 109 16 chr17 22099152 22101453 -63337027 + L1M4 LINE L1 21 2537 -5028 4842 161 51 30 chr17 22101439 22101627 -63336853 + L1M4 LINE L1 3133 3316 -4249 * 2231 115 0 0 chr17 22101627 22101923 -63336557 + AluSq SINE Alu 1 296 -17 4842 161 51 30 chr17 22101923 22102762 -63335718 + L1M4 LINE L1 3316 4217 -3348 1712 143 46 55 chr17 22102762 22102899 -63335581 + AluSx SINE Alu 3 140 -172 2100 137 0 0 chr17 22102899 22103192 -63335288 + AluSx SINE Alu 5 297 -15 1712 143 46 55 chr17 22103192 22103361 -63335119 + AluSx SINE Alu 140 306 -6 4842 161 51 30 chr17 22103361 22103852 -63334628 + L1M4 LINE L1 4217 4696 -2869 967 180 62 12 chr17 22103852 22104082 -63334398 + MSTD LTR MaLR 114 396 0 667 101 0 0 chr17 22104145 22104244 -63334236 + AluY SINE Alu 213 311 0 1473 221 32 52 chr17 22104263 22104478 -63334002 + L1M4 LINE L1 6042 6245 -1320 2275 115 27 27 chr17 22104478 22104853 -63333627 - THE1C LTR MaLR 0 375 1 1473 221 32 52 chr17 22104853 22105077 -63333403 + L1M4 LINE L1 6245 6472 -1093 3153 154 53 68 chr17 22105083 22105734 -63332746 + L1MCb LINE L1 724 1374 -5190 319 79 0 0 chr17 22105734 22105772 -63332708 + tRNA-Lys-AAG tRNA tRNA 1 38 -38 3153 154 53 68 chr17 22105772 22106122 -63332358 + L1MCb LINE L1 1374 1728 -4836 215 282 53 92 chr17 22106245 22106316 -63332164 - MER5A DNA MER1_type -1 188 123 2116 79 0 11 chr17 22106316 22106583 -63331897 + AluY SINE Alu 30 293 -18 215 282 53 92 chr17 22106583 22106642 -63331838 - MER5A DNA MER1_type -66 123 63 234 0 0 0 chr17 22106840 22106866 -63331614 + (A)n Simple_repeat Simple_repeat 1 26 0 529 185 0 0 chr17 22106976 22107068 -63331412 + MLT1D LTR MaLR 414 505 0 2039 150 211 19 chr17 22107873 22108300 -63330180 + LTR22 LTR ERVK 1 509 0 319 186 127 85 chr17 22108301 22108419 -63330061 + MIR SINE MIR 22 144 -118 2113 142 0 10 chr17 22108506 22108808 -63329672 + AluSx SINE Alu 3 301 -11 23 33 0 0 chr17 22110302 22110332 -63328148 + AT_rich Low_complexity Low_complexity 1 30 0 2382 98 0 0 chr17 22110373 22110670 -63327810 + AluSg SINE Alu 1 297 -13 1308 276 58 15 chr17 22111394 22111804 -63326676 + LTR16B LTR ERVL 37 464 0 1860 152 3 37 chr17 22112784 22113107 -63325373 + AluJb SINE Alu 1 312 0 307 305 131 34 chr17 22113517 22113753 -63324727 - L1MC4a LINE L1 -1649 6159 5901 4792 187 122 19 chr17 22113760 22115072 -63323408 - Charlie1 DNA MER1_type -6 2755 1 422 329 61 26 chr17 22115076 22115304 -63323176 - L1MC4a LINE L1 -1905 5903 5668 954 104 0 15 chr17 22115593 22115728 -63322752 + FLAM_C SINE Alu 1 133 0 311 284 57 11 chr17 22115751 22115839 -63322641 - HAL1 LINE L1 -2379 128 37 253 169 28 28 chr17 22115927 22115998 -63322482 + (TA)n Simple_repeat Simple_repeat 1 71 0 447 270 45 34 chr17 22117011 22117189 -63321291 + MLT1J LTR MaLR 1 180 -331 312 244 35 23 chr17 22119268 22119354 -63319126 + MER119 DNA MER1_type 1 87 -496 1999 86 8 4 chr17 22119354 22119609 -63318871 + AluSq SINE Alu 38 293 -20 5171 174 18 11 chr17 22119619 22120938 -63317542 + L1MB2 LINE L1 4839 6168 -3 2362 95 3 3 chr17 22120943 22121248 -63317232 + AluSx SINE Alu 1 305 -7 1141 131 0 0 chr17 22121248 22121408 -63317072 + AluSg/x SINE Alu 134 293 -19 2393 97 3 0 chr17 22121442 22121750 -63316730 + AluY SINE Alu 1 309 -2 24 67 0 0 chr17 22121820 22121865 -63316615 + AT_rich Low_complexity Low_complexity 1 45 0 868 142 8 0 chr17 22122465 22122592 -63315888 + FLAM_C SINE Alu 1 128 -5 224 301 0 32 chr17 22122593 22122686 -63315794 - L2 LINE L2 -159 3154 3065 226 272 138 59 chr17 22122739 22122925 -63315555 + L1MC4a LINE L1 6075 6288 -1520 2350 107 0 7 chr17 22122925 22123234 -63315246 - AluSx SINE Alu -5 307 1 226 272 138 59 chr17 22123234 22123301 -63315179 + L1MC4a LINE L1 6288 6348 -1460 1125 233 52 0 chr17 22123448 22123718 -63314762 + HAL1 LINE L1 92 375 -2132 279 317 49 7 chr17 22123716 22123858 -63314622 + L1MA9 LINE L1 6083 6230 -82 * 1981 196 18 25 chr17 22123858 22124251 -63314229 - MER47B DNA MER2_type -1 417 28 1083 263 93 55 chr17 22124327 22124779 -63313701 + HAL1 LINE L1 352 820 -1687 326 174 210 18 chr17 22124795 22124962 -63313518 + HAL1 LINE L1 995 1193 -1314 446 204 124 9 chr17 22125071 22125184 -63313296 - L2 LINE L2 -1315 1999 1874 533 257 65 36 chr17 22125187 22125494 -63312986 + L1M4 LINE L1 4382 4697 -1449 294 29 0 0 chr17 22125897 22125932 -63312548 + (TA)n Simple_repeat Simple_repeat 1 35 0 1448 173 135 4 chr17 22125937 22126203 -63312277 - AluJo SINE Alu 0 302 2 746 215 0 8 chr17 22126208 22126338 -63312142 - FLAM_C SINE Alu -3 130 2 835 193 93 0 chr17 22126447 22126608 -63311872 - MER46A DNA MER2_type -60 176 1 2244 82 3 70 chr17 22126741 22127072 -63311408 - AluSg SINE Alu 0 310 2 851 36 18 27 chr17 22127249 22127361 -63311119 + L1PA4 LINE L1 6045 6155 0 195 273 18 0 chr17 22129450 22129505 -63308975 - MIR SINE MIR -3 259 204 241 69 0 0 chr17 22129524 22129553 -63308927 + AluY SINE Alu 14 42 -258 2372 54 0 4 chr17 22129553 22129832 -63308648 + AluY SINE Alu 21 298 -13 224 300 138 0 chr17 22129858 22129938 -63308542 - MIR SINE MIR -118 144 54 608 317 94 57 chr17 22129975 22130283 -63308197 + L2 LINE L2 1428 1723 -1591 2328 95 0 0 chr17 22130283 22130578 -63307902 - AluSg SINE Alu -2 308 14 608 317 94 57 chr17 22130578 22131181 -63307299 + L2 LINE L2 1723 2373 -941 2512 70 0 0 chr17 22131538 22131839 -63306641 - AluSc SINE Alu -8 301 1 817 211 0 0 chr17 22131995 22132151 -63306329 + MER3 DNA MER1_type 19 127 -82 196 303 123 41 chr17 22132394 22132516 -63305964 + L2 LINE L2 3182 3313 0 2286 93 0 0 chr17 22132517 22132806 -63305674 + AluSx SINE Alu 1 289 -23 596 116 35 0 chr17 22133248 22133334 -63305146 - AluJ SINE Alu -25 287 199 1047 132 0 0 chr17 22133334 22133478 -63305002 - AluJ SINE Alu -168 144 1 1910 145 35 0 chr17 22133487 22133777 -63304703 - AluSx SINE Alu -12 300 1 2048 142 0 19 chr17 22133844 22134160 -63304320 - AluSx SINE Alu -2 310 1 2196 123 0 0 chr17 22134169 22134478 -63304002 - AluY SINE Alu -2 309 1 250 118 0 39 chr17 22134482 22134533 -63303947 - FLAM_A SINE Alu 0 133 85 802 204 0 39 chr17 22134533 22134714 -63303766 - AluJo SINE Alu -92 220 47 205 321 168 10 chr17 22135066 22135262 -63303218 - MIR SINE MIR 0 262 36 236 228 148 40 chr17 22135443 22135544 -63302936 - MIR SINE MIR -27 235 124 2062 101 50 7 chr17 22135670 22135967 -63302513 + AluSx SINE Alu 1 310 -2 228 303 75 30 chr17 22136294 22136457 -63302023 - MIR SINE MIR -77 131 20 1966 116 58 0 chr17 22136920 22137195 -63301285 + AluSx SINE Alu 1 291 -21 2304 77 3 0 chr17 22137197 22137518 -63300962 + AluSp SINE Alu 1 322 0 35 63 0 0 chr17 22137846 22137909 -63300571 + AT_rich Low_complexity Low_complexity 1 63 0 2514 53 0 7 chr17 22138166 22138468 -63300012 + AluY SINE Alu 1 300 -11 277 331 74 51 chr17 22138741 22138916 -63299564 - MIR SINE MIR -80 182 4 2280 95 7 0 chr17 22139122 22139418 -63299062 + AluSp SINE Alu 1 298 -15 2407 185 105 40 chr17 22139435 22140320 -63298160 + L1M4c LINE L1 1393 2219 -4163 1297 171 167 8 chr17 22140320 22140583 -63297897 + AluSx SINE Alu 1 305 -7 2407 185 105 40 chr17 22140583 22140746 -63297734 + L1M4c LINE L1 2219 2370 -4012 1595 193 10 7 chr17 22140746 22141041 -63297439 + AluJb SINE Alu 1 296 -16 2385 90 0 10 chr17 22141048 22141349 -63297131 + AluSg SINE Alu 1 298 -12 2407 185 105 40 chr17 22141349 22141695 -63296785 + L1M4c LINE L1 2375 2697 -3685 1528 197 7 27 chr17 22141695 22141994 -63296486 - AluJo SINE Alu -19 293 1 2407 185 105 40 chr17 22141994 22142069 -63296411 + L1M4c LINE L1 2697 3058 -3324 254 132 29 29 chr17 22142128 22142196 -63296284 + L1M4c LINE L1 3045 3112 -3270 1191 153 129 69 chr17 22142198 22142238 -63296242 - THE1C LTR MaLR 0 375 339 2074 128 3 0 chr17 22142238 22142536 -63295944 + AluSx SINE Alu 1 299 -13 1191 153 129 69 chr17 22142536 22142868 -63295612 - THE1C LTR MaLR -36 339 1 1056 192 39 32 chr17 22142869 22143035 -63295445 + L1M4c LINE L1 3111 3274 -3108 2098 130 0 7 chr17 22143035 22143334 -63295146 + AluSx SINE Alu 1 297 -15 2075 134 7 13 chr17 22143336 22143641 -63294839 + AluSx SINE Alu 1 303 -9 1056 192 39 32 chr17 22143641 22143752 -63294728 + L1M4c LINE L1 3274 3393 -2989 1909 152 17 0 chr17 22143754 22144056 -63294424 - AluJb SINE Alu -5 307 1 890 256 39 32 chr17 22144268 22144333 -63294147 + L1M4b LINE L1 1232 1295 -5564 2329 123 0 0 chr17 22144333 22144643 -63293837 + AluSx SINE Alu 1 310 -2 890 256 39 32 chr17 22144643 22144858 -63293622 + L1M4b LINE L1 1295 1514 -5345 316 26 0 0 chr17 22144860 22144898 -63293582 - AluY SINE Alu -8 292 255 1397 113 0 5 chr17 22144919 22145114 -63293366 + AluSq SINE Alu 1 194 -119 2008 214 96 45 chr17 22145126 22145794 -63292686 + L1M4b LINE L1 1572 2273 -4686 263 198 81 12 chr17 22146030 22146116 -63292364 + L1M4b LINE L1 2324 2415 -4544 1664 199 10 0 chr17 22146122 22146423 -63292057 + AluJb SINE Alu 1 304 -8 630 168 134 28 chr17 22146774 22146953 -63291527 + L1M4b LINE L1 2863 3060 -3899 451 149 241 0 chr17 22146953 22147040 -63291440 + AluJb SINE Alu 2 109 -203 253 248 79 0 chr17 22147040 22147141 -63291339 - MSTA LTR MaLR -319 109 1 725 196 25 6 chr17 22147142 22147305 -63291175 + L1M4b LINE L1 3686 3851 -3106 2439 55 0 3 chr17 22147308 22147601 -63290879 + AluY SINE Alu 1 292 -19 1674 181 0 74 chr17 22147712 22147857 -63290623 + AluJo SINE Alu 1 155 -147 1953 102 0 102 chr17 22147857 22148000 -63290480 + AluSq SINE Alu 1 92 -221 2394 99 0 0 chr17 22148000 22148304 -63290176 + AluSg SINE Alu 1 304 -6 1953 102 0 102 chr17 22148304 22148494 -63289986 + AluSq SINE Alu 92 300 -13 2243 85 0 4 chr17 22148496 22148806 -63289674 + AluSg1 SINE Alu 1 309 0 1674 181 0 74 chr17 22148806 22148982 -63289498 + AluJo SINE Alu 156 302 0 1852 152 0 11 chr17 22149012 22149323 -63289157 + AluJb SINE Alu 6 313 0 1990 222 97 19 chr17 22149327 22150251 -63288229 + L2 LINE L2 2223 3312 -1 2421 81 0 13 chr17 22150617 22150927 -63287553 + AluY SINE Alu 1 306 -5 320 294 70 48 chr17 22151234 22151254 -63287226 + L1MC/D LINE L1 5347 5365 -2443 2189 126 10 0 chr17 22151254 22151563 -63286917 + AluSx SINE Alu 1 312 0 320 294 70 48 chr17 22151563 22151729 -63286751 + L1MC/D LINE L1 5365 5537 -2271 294 243 278 28 chr17 22151759 22151828 -63286652 + L1MC/D LINE L1 5609 5660 -2148 267 31 0 0 chr17 22151828 22151860 -63286620 + (CA)n Simple_repeat Simple_repeat 2 33 0 294 243 278 28 chr17 22151860 22151934 -63286546 + L1MC/D LINE L1 5659 5788 -2020 21 36 0 0 chr17 22152428 22152456 -63286024 + AT_rich Low_complexity Low_complexity 1 28 0 2047 117 0 39 chr17 22152466 22152774 -63285706 + AluSx SINE Alu 1 296 -16 2687 51 3 0 chr17 22154057 22154369 -63284111 - AluSp SINE Alu 0 313 1 2340 95 0 3 chr17 22155526 22155831 -63282649 - AluSg SINE Alu -6 304 1 302 255 31 10 chr17 22155854 22155952 -63282528 + L1MC4 LINE L1 7925 8024 -18 549 220 59 8 chr17 22156179 22156297 -63282183 - FLAM_A SINE Alu -9 124 1 40 0 0 0 chr17 22156420 22156460 -63282020 + AT_rich Low_complexity Low_complexity 1 40 0 186 384 41 14 chr17 22157589 22157632 -63280848 + L3b LINE CR1 1481 1555 -28 188 200 0 0 chr17 22157632 22157662 -63280818 + MIR3 SINE MIR 147 176 -32 2114 100 0 53 chr17 22157700 22158021 -63280459 + AluSx SINE Alu 1 304 -8 2292 104 0 0 chr17 22158231 22158528 -63279952 + AluSx SINE Alu 1 297 -15 1913 138 10 3 chr17 22159429 22159719 -63278761 - AluSx SINE Alu -20 292 1 445 246 126 24 chr17 22159751 22159918 -63278562 + MIR SINE MIR 8 191 -71 458 71 0 0 chr17 22159941 22159997 -63278483 + U6 snRNA snRNA 1 56 -51 27 29 0 0 chr17 22159997 22160031 -63278449 + AT_rich Low_complexity Low_complexity 1 34 0 2309 95 0 0 chr17 22160380 22160674 -63277806 + AluSg SINE Alu 12 305 -5 22 0 0 0 chr17 22161410 22161432 -63277048 + AT_rich Low_complexity Low_complexity 1 22 0 21 57 0 0 chr17 22161556 22161591 -63276889 + AT_rich Low_complexity Low_complexity 1 35 0 2261 61 10 31 chr17 22162416 22162709 -63275771 + AluY SINE Alu 1 287 -24 822 196 0 0 chr17 22162769 22162902 -63275578 + AluJo SINE Alu 2 134 -178 2207 103 0 42 chr17 22162902 22163212 -63275268 + AluSx SINE Alu 1 297 -15 2211 121 0 6 chr17 22163215 22163529 -63274951 + AluSx SINE Alu 1 312 0 2171 96 3 63 chr17 22163602 22163934 -63274546 + AluSx SINE Alu 1 312 0 1128 135 0 0 chr17 22163934 22164097 -63274383 + AluY SINE Alu 133 295 -16 2373 81 7 0 chr17 22164100 22164395 -63274085 + AluY SINE Alu 3 299 -12 25 51 0 0 chr17 22164467 22164506 -63273974 + AT_rich Low_complexity Low_complexity 1 39 0 2434 67 0 7 chr17 22164727 22164896 -63273584 - AluY SINE Alu -15 296 128 180 0 0 0 chr17 22164896 22164916 -63273564 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2434 67 0 7 chr17 22164916 22165044 -63273436 - AluY SINE Alu -183 128 1 1930 148 0 25 chr17 22165214 22165532 -63272948 - AluJb SINE Alu -2 310 1 2427 67 0 3 chr17 22165667 22165964 -63272516 - AluY SINE Alu -15 296 1 474 154 0 55 chr17 22165964 22166055 -63272425 - MLT1A2 LTR MaLR -279 87 1 1835 129 87 0 chr17 22166110 22166397 -63272083 + AluSx SINE Alu 1 312 0 2088 120 0 3 chr17 22166916 22167208 -63271272 + AluSg SINE Alu 5 295 -15 2624 46 0 0 chr17 22167215 22167517 -63270963 + AluY SINE Alu 1 302 -9 1501 122 0 0 chr17 22167517 22167722 -63270758 + AluSg/x SINE Alu 106 310 0 874 160 0 77 chr17 22167963 22168144 -63270336 + FRAM SINE Alu 2 168 -8 1120 207 48 27 chr17 22168144 22168394 -63270086 - L1ME2 LINE L1 -52 6112 5854 2487 60 0 0 chr17 22168394 22168693 -63269787 + AluY SINE Alu 1 299 -12 1120 207 48 27 chr17 22168693 22168737 -63269743 - L1ME2 LINE L1 -310 5854 5812 2412 76 0 16 chr17 22168784 22169098 -63269382 + AluY SINE Alu 1 309 -2 2234 106 0 7 chr17 22169117 22169420 -63269060 + AluSx SINE Alu 1 301 -11 299 280 48 16 chr17 22169553 22169678 -63268802 - L1 LINE L1 -1130 5016 4888 549 255 107 79 chr17 22169788 22170213 -63268267 + L2 LINE L2 2688 3119 -153 1949 163 0 0 chr17 22170213 22170514 -63267966 + AluJb SINE Alu 3 303 -9 549 255 107 79 chr17 22170514 22170607 -63267873 + L2 LINE L2 3119 3208 -64 2178 109 3 0 chr17 22170781 22171088 -63267392 + AluSq SINE Alu 1 308 0 848 121 17 0 chr17 22171101 22171217 -63267263 + AluJb SINE Alu 1 118 -194 23 68 0 0 chr17 22171217 22171261 -63267219 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr17 22171272 22171295 -63267185 + AT_rich Low_complexity Low_complexity 1 23 0 1872 116 8 19 chr17 22171325 22171593 -63266887 + AluSq SINE Alu 1 265 -48 468 267 54 64 chr17 22171613 22171777 -63266703 + L1ME LINE L1 5600 5760 -406 1561 185 17 31 chr17 22171777 22172069 -63266411 - AluJo SINE Alu -24 288 1 468 267 54 64 chr17 22172069 22172145 -63266335 + L1ME LINE L1 5760 5835 -331 2235 90 3 0 chr17 22172638 22172937 -63265543 - AluSp SINE Alu -13 300 1 593 70 0 0 chr17 22172975 22173046 -63265434 + tRNA-Gly-GGG tRNA tRNA 1 71 -3 922 133 7 0 chr17 22173056 22173199 -63265281 + AluSp/q SINE Alu 161 304 -9 2364 64 3 0 chr17 22173378 22173676 -63264804 + AluY SINE Alu 1 299 -12 2084 115 7 0 chr17 22174205 22174500 -63263980 - AluSx SINE Alu -7 305 9 2044 124 7 3 chr17 22174581 22174879 -63263601 - AluSp SINE Alu -14 299 1 487 206 43 85 chr17 22174924 22175045 -63263435 + L2 LINE L2 3179 3295 -18 1967 122 7 3 chr17 22175045 22175340 -63263140 + AluSq SINE Alu 1 296 -17 487 206 43 85 chr17 22175340 22175359 -63263121 + L2 LINE L2 3295 3313 0 1035 161 0 6 chr17 22175610 22175790 -63262690 - AluJo SINE Alu -11 301 123 21 71 0 0 chr17 22176066 22176108 -63262372 + AT_rich Low_complexity Low_complexity 1 42 0 872 159 0 0 chr17 22176137 22176269 -63262211 + FLAM_C SINE Alu 1 132 -1 1920 117 7 23 chr17 22176298 22176597 -63261883 + AluSx SINE Alu 1 294 -18 38 22 0 0 chr17 22176864 22176909 -63261571 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr17 22177007 22177035 -63261445 + AT_rich Low_complexity Low_complexity 1 28 0 439 299 25 13 chr17 22177233 22177390 -63261090 + MER103 DNA DNA 2 160 -6 1989 74 0 44 chr17 22178324 22178643 -63259837 + AluSx SINE Alu 1 306 0 27 29 0 0 chr17 22179401 22179435 -63259045 + GC_rich Low_complexity Low_complexity 1 34 0 2137 125 3 0 chr17 22181189 22181493 -63256987 - AluSx SINE Alu -7 305 1 1990 129 0 3 chr17 22181495 22181789 -63256691 - AluSx SINE Alu -19 293 1 2281 53 0 7 chr17 22181801 22182108 -63256372 - AluY SINE Alu 0 305 1 2071 113 0 17 chr17 22182530 22182831 -63255649 - AluSx SINE Alu -16 296 1 1995 124 0 0 chr17 22183253 22183535 -63254945 + AluSq SINE Alu 1 282 -31 507 33 0 0 chr17 22183535 22183596 -63254884 + (CA)n Simple_repeat Simple_repeat 1 61 0 1020 147 6 0 chr17 22183596 22183752 -63254728 + AluSg/x SINE Alu 135 291 -21 2427 77 0 0 chr17 22184286 22184597 -63253883 + AluY SINE Alu 1 311 0 2403 75 0 0 chr17 22184611 22184917 -63253563 + AluY SINE Alu 1 306 -5 871 194 0 29 chr17 22184928 22185103 -63253377 + AluJo SINE Alu 1 170 -142 541 217 0 0 chr17 22185184 22185276 -63253204 + MER21B LTR ERV1 323 414 -449 414 78 0 0 chr17 22185276 22185327 -63253153 + AluSq/x SINE Alu 59 109 -203 198 317 32 49 chr17 22185327 22185450 -63253030 - L2 LINE L2 -189 3083 2963 510 217 9 17 chr17 22185751 22185866 -63252614 - MER21B LTR ERV1 -427 436 323 2156 129 0 0 chr17 22185956 22186266 -63252214 + AluSx SINE Alu 1 310 -2 368 281 128 20 chr17 22186360 22186563 -63251917 - LTR16A LTR ERVL -7 443 219 23 33 0 0 chr17 22186802 22186832 -63251648 + AT_rich Low_complexity Low_complexity 1 30 0 1829 128 4 0 chr17 22186955 22187228 -63251252 + AluSx SINE Alu 21 294 -18 306 133 0 0 chr17 22187378 22187423 -63251057 + AluSg/x SINE Alu 173 217 -83 965 115 0 38 chr17 22187423 22187580 -63250900 - AluSq/x SINE Alu -161 151 1 1221 209 59 14 chr17 22187585 22187872 -63250608 - AluJo SINE Alu -12 300 1 580 201 15 30 chr17 22187872 22188006 -63250474 + Charlie1 DNA MER1_type 2629 2760 -1 364 248 50 10 chr17 22188077 22188178 -63250302 + MIR SINE MIR 49 153 -109 2141 107 3 0 chr17 22188296 22188605 -63249875 + AluSq SINE Alu 1 310 -3 277 114 0 0 chr17 22189397 22189441 -63249039 + L1M4 LINE L1 3911 3954 -2192 1286 167 11 57 chr17 22189462 22189725 -63248755 + L1MC1 LINE L1 6083 6333 0 4150 163 17 30 chr17 22189725 22190169 -63248311 + L1PB4 LINE L1 5391 5822 -334 2145 98 0 10 chr17 22190169 22190465 -63248015 + AluSg SINE Alu 1 293 -17 4150 163 17 30 chr17 22190465 22190794 -63247686 + L1PB4 LINE L1 5822 6154 -2 922 298 54 17 chr17 22190834 22191310 -63247170 + L2 LINE L2 2702 3244 -69 203 172 52 0 chr17 22191314 22191372 -63247108 + (TA)n Simple_repeat Simple_repeat 2 62 0 512 191 109 18 chr17 22191376 22191486 -63246994 - FLAM_C SINE Alu -12 121 2 939 201 12 0 chr17 22191839 22192003 -63246477 - FRAM SINE Alu 0 166 1 1884 138 31 0 chr17 22192013 22192302 -63246178 - AluSg SINE Alu -10 300 3 308 125 0 0 chr17 22192347 22192387 -63246093 + Alu SINE Alu 2 41 -267 1645 130 47 14 chr17 22192642 22192918 -63245562 + AluSq SINE Alu 13 297 -16 2084 116 3 0 chr17 22192922 22193223 -63245257 + AluSx SINE Alu 1 302 -10 1123 125 0 0 chr17 22193223 22193383 -63245097 + AluSq SINE Alu 134 293 -20 742 188 0 8 chr17 22193383 22193511 -63244969 - FRAM SINE Alu -22 154 28 3347 146 15 58 chr17 22193515 22193684 -63244796 + MER49 LTR ERV1 341 516 -407 1731 88 0 92 chr17 22193684 22193784 -63244696 + AluSx SINE Alu 38 146 -166 1875 72 0 34 chr17 22193784 22194048 -63244432 + AluY SINE Alu 55 309 -2 1731 88 0 92 chr17 22194048 22194230 -63244250 + AluSx SINE Alu 146 294 -18 3347 146 15 58 chr17 22194230 22194613 -63243867 + MER49 LTR ERV1 516 867 -56 2307 40 34 10 chr17 22194613 22194911 -63243569 + AluY SINE Alu 1 305 -6 3347 146 15 58 chr17 22194911 22194966 -63243514 + MER49 LTR ERV1 867 923 0 2529 40 0 0 chr17 22194972 22195275 -63243205 + AluY SINE Alu 1 303 -8 1131 79 6 0 chr17 22195275 22195440 -63243040 + AluY SINE Alu 136 301 -10 704 278 163 10 chr17 22195447 22195742 -63242738 + L1ME3A LINE L1 5557 5896 -274 321 200 24 47 chr17 22195930 22196015 -63242465 + MLT1H1 LTR MaLR 396 478 -77 186 43 0 0 chr17 22196019 22196042 -63242438 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 753 197 0 0 chr17 22196043 22196165 -63242315 - FLAM_C SINE Alu -20 123 2 2144 102 7 0 chr17 22196190 22196483 -63241997 + AluSx SINE Alu 1 295 -17 21 71 0 0 chr17 22196646 22196688 -63241792 + AT_rich Low_complexity Low_complexity 1 42 0 2361 77 0 0 chr17 22196774 22197073 -63241407 - AluY SINE Alu -12 299 1 26 30 0 0 chr17 22197188 22197221 -63241259 + AT_rich Low_complexity Low_complexity 1 33 0 2027 102 51 3 chr17 22197246 22197541 -63240939 - AluSp SINE Alu -4 309 1 1601 153 57 3 chr17 22197543 22197825 -63240655 - AluJo SINE Alu -13 299 3 933 218 9 18 chr17 22197887 22198116 -63240364 - AluJb SINE Alu -1 311 85 205 118 59 0 chr17 22198123 22198157 -63240323 + CT-rich Low_complexity Low_complexity 1 36 0 1579 160 22 41 chr17 22198157 22198657 -63239823 - AluJb SINE Alu 0 494 1 2219 86 6 19 chr17 22198669 22198984 -63239496 - AluSq SINE Alu -2 311 1 1967 143 0 0 chr17 22199113 22199407 -63239073 - AluSx SINE Alu -18 294 1 1211 177 110 0 chr17 22199439 22199749 -63238731 - Charlie1a DNA MER1_type -98 1357 1014 1893 142 7 0 chr17 22199765 22200067 -63238413 - AluSg SINE Alu -6 304 1 2306 76 0 13 chr17 22200100 22200415 -63238065 - AluY SINE Alu 0 311 1 306 50 0 0 chr17 22200417 22200457 -63238023 + (TG)n Simple_repeat Simple_repeat 1 40 0 894 162 107 54 chr17 22200457 22200798 -63237682 - LTR7 LTR ERV1 -48 402 1 3921 95 7 9 chr17 22200798 22201356 -63237124 - HERVH LTR ERV1 0 7713 7157 1442 161 28 0 chr17 22201349 22201603 -63236877 - HERVH LTR ERV1 -1697 6016 5756 * 3561 167 2 21 chr17 22201594 22202242 -63236238 - HERVH LTR ERV1 -2735 4616 3949 * 4010 148 0 5 chr17 22202228 22202868 -63235612 - HERVH LTR ERV1 -3720 3993 3357 13150 136 6 8 chr17 22202868 22204901 -63233579 - HERVH LTR ERV1 -4883 2830 801 1877 203 27 55 chr17 22204871 22205397 -63233083 - HERVH LTR ERV1 -7191 522 12 * 750 103 0 19 chr17 22205409 22205516 -63232964 - LTR7 LTR ERV1 0 450 346 2218 102 10 0 chr17 22205517 22205822 -63232658 - AluSp SINE Alu -5 308 1 1072 148 38 63 chr17 22205831 22205985 -63232495 - Charlie1a DNA MER1_type -1798 963 807 729 191 0 8 chr17 22205985 22206111 -63232369 + FLAM_C SINE Alu 1 125 -8 1819 123 47 36 chr17 22206119 22206420 -63232060 + AluSx SINE Alu 1 304 -8 1072 148 38 63 chr17 22206420 22206493 -63231987 - Charlie1a DNA MER1_type -1961 800 733 1604 144 67 3 chr17 22206498 22206782 -63231698 + AluJo SINE Alu 7 308 -4 2136 235 64 10 chr17 22206782 22207051 -63231429 - Charlie1a DNA MER1_type -2214 547 294 2094 111 3 3 chr17 22207051 22207348 -63231132 - AluSx SINE Alu -14 298 2 2136 235 64 10 chr17 22207348 22207597 -63230883 - Charlie1a DNA MER1_type -2467 294 1 1842 93 3 80 chr17 22208082 22208383 -63230097 + AluSx SINE Alu 1 278 -34 23 0 0 0 chr17 22208436 22208459 -63230021 + AT_rich Low_complexity Low_complexity 1 23 0 25 65 0 0 chr17 22208547 22208593 -63229887 + AT_rich Low_complexity Low_complexity 1 46 0 393 278 119 0 chr17 22209516 22209642 -63228838 + L2 LINE L2 3173 3313 0 334 164 134 30 chr17 22210201 22210268 -63228212 + MER5A DNA MER1_type 1 74 -115 786 108 18 0 chr17 22210270 22210381 -63228099 + FLAM_C SINE Alu 21 133 -10 188 232 313 30 chr17 22210388 22210487 -63227993 + MIR SINE MIR 136 262 0 2214 78 3 10 chr17 22211003 22211298 -63227182 - AluY SINE Alu -18 293 1 243 219 154 81 chr17 22211333 22211456 -63227024 + L2 LINE L2 3178 3309 -4 2291 86 3 0 chr17 22212761 22213062 -63225418 + AluSp SINE Alu 1 302 -11 1669 108 100 18 chr17 22213277 22213556 -63224924 - AluSq SINE Alu -11 302 1 2217 98 0 0 chr17 22213560 22213855 -63224625 - AluY SINE Alu -16 295 1 1918 149 0 3 chr17 22213858 22214154 -63224326 - AluSx SINE Alu -17 295 1 2112 111 3 7 chr17 22214159 22214466 -63224014 - AluSx SINE Alu -6 306 1 24 85 0 0 chr17 22215709 22215768 -63222712 + AT_rich Low_complexity Low_complexity 1 59 0 189 74 0 0 chr17 22215955 22215982 -63222498 + (TA)n Simple_repeat Simple_repeat 1 27 0 21 36 0 0 chr17 22216292 22216320 -63222160 + AT_rich Low_complexity Low_complexity 1 28 0 318 272 179 19 chr17 22217261 22217423 -63221057 - MIR SINE MIR -7 255 68 326 353 49 0 chr17 22217443 22217565 -63220915 + L1ME LINE L1 5577 5704 -417 219 300 67 50 chr17 22217797 22217917 -63220563 - MIR3 SINE MIR -3 205 84 2213 92 3 7 chr17 22217965 22218269 -63220211 - AluSp SINE Alu -10 303 1 1381 279 76 56 chr17 22218279 22218347 -63220133 - L1MEc LINE L1 -5348 1048 983 1847 114 42 39 chr17 22218347 22218655 -63219825 - AluSg SINE Alu -1 309 1 1381 279 76 56 chr17 22218655 22218816 -63219664 - L1MEc LINE L1 -5413 983 827 2133 107 0 3 chr17 22218816 22219115 -63219365 - AluSq SINE Alu -15 298 1 1381 279 76 56 chr17 22219115 22219599 -63218881 - L1MEc LINE L1 -5569 827 314 1985 81 77 0 chr17 22219599 22219871 -63218609 - AluSq SINE Alu -20 293 1 1381 279 76 56 chr17 22219871 22219928 -63218552 - L1MEc LINE L1 -6082 314 260 256 286 12 0 chr17 22219937 22220021 -63218459 - L1MEc LINE L1 -6235 161 77 1985 131 7 0 chr17 22220996 22221293 -63217187 + AluSx SINE Alu 1 299 -13 183 359 21 47 chr17 22222264 22222456 -63216024 + L2 LINE L2 2490 2676 -638 2449 74 13 0 chr17 22222507 22222816 -63215664 + AluSp SINE Alu 1 313 0 2082 107 17 33 chr17 22223083 22223225 -63215255 + AluSx SINE Alu 1 144 -168 1914 146 0 7 chr17 22223225 22223519 -63214961 + AluSx SINE Alu 21 312 0 2082 107 17 33 chr17 22223519 22223675 -63214805 + AluSx SINE Alu 144 294 -18 218 264 0 143 chr17 22223859 22223920 -63214560 + MIR SINE MIR 69 114 -94 1834 138 6 44 chr17 22223920 22224104 -63214376 - AluSx SINE Alu -4 308 139 2251 94 3 3 chr17 22224104 22224402 -63214078 - AluSg SINE Alu -12 298 1 1834 138 6 44 chr17 22224402 22224535 -63213945 - AluSx SINE Alu -173 139 3 218 264 0 143 chr17 22224535 22224564 -63213916 + MIR SINE MIR 114 146 -62 496 316 81 60 chr17 22224816 22224952 -63213528 - L2 LINE L2 -4 3309 3177 1655 178 13 10 chr17 22224952 22225250 -63213230 - AluJo SINE Alu -13 299 1 496 316 81 60 chr17 22225250 22225319 -63213161 - L2 LINE L2 -136 3177 3111 1603 176 76 0 chr17 22225319 22225608 -63212872 + AluJb SINE Alu 1 311 -1 496 316 81 60 chr17 22225608 22225885 -63212595 - L2 LINE L2 -202 3111 2816 273 294 101 0 chr17 22226192 22226301 -63212179 + L1MC5 LINE L1 7323 7442 -519 336 294 109 0 chr17 22226356 22226448 -63212032 + L2 LINE L2 3171 3272 0 1228 252 136 31 chr17 22226641 22227364 -63211116 + L2 LINE L2 2509 3313 0 2289 84 0 7 chr17 22227606 22227930 -63210550 + AluY SINE Alu 1 311 0 2328 96 0 3 chr17 22227933 22228245 -63210235 + AluY SINE Alu 1 311 0 675 270 0 38 chr17 22228426 22228585 -63209895 - AluJb SINE Alu -18 294 142 1408 117 132 49 chr17 22228617 22228883 -63209597 + AluSx SINE Alu 15 302 -10 2428 91 0 7 chr17 22228889 22229198 -63209282 + AluSg SINE Alu 1 307 -3 1382 110 57 24 chr17 22229208 22229417 -63209063 + AluSx SINE Alu 1 216 -96 1077 114 67 0 chr17 22229421 22229570 -63208910 - AluSc SINE Alu -150 159 1 3393 45 2 8 chr17 22229876 22230273 -63208207 - L1PA6 LINE L1 -2 6152 5758 34 0 0 22 chr17 22230327 22230352 -63208128 + AT_rich Low_complexity Low_complexity 1 26 -18 2042 156 3 0 chr17 22230352 22230659 -63207821 + AluSx SINE Alu 1 308 -4 34 0 0 22 chr17 22230659 22230678 -63207802 + AT_rich Low_complexity Low_complexity 26 44 0 256 242 70 39 chr17 22231314 22231442 -63207038 + L1MC4a LINE L1 4626 4757 -1389 2309 105 0 40 chr17 22231511 22231836 -63206644 + AluSx SINE Alu 1 312 0 366 309 50 7 chr17 22231944 22232083 -63206397 + L1MC4a LINE L1 5263 5407 -757 2213 88 35 0 chr17 22232122 22232406 -63206074 - AluSc SINE Alu -15 294 1 854 147 0 0 chr17 22232504 22232620 -63205860 + FLAM_C SINE Alu 1 116 -27 26 50 0 0 chr17 22232620 22232660 -63205820 + AT_rich Low_complexity Low_complexity 1 40 0 523 169 0 0 chr17 22233078 22233155 -63205325 + AluS SINE Alu 2 78 -235 853 113 65 0 chr17 22233370 22233494 -63204986 - AluSq/x SINE Alu -178 134 3 2196 119 0 0 chr17 22233570 22233873 -63204607 + AluY SINE Alu 2 304 -7 2356 84 3 3 chr17 22234019 22234328 -63204152 - AluSx SINE Alu -3 309 1 2389 78 0 3 chr17 22234481 22234776 -63203704 - AluY SINE Alu -17 294 1 598 204 144 0 chr17 22235099 22235231 -63203249 - MIR SINE MIR -110 152 2 30 59 0 0 chr17 22235256 22235307 -63203173 + AT_rich Low_complexity Low_complexity 1 51 0 638 235 0 0 chr17 22235706 22235825 -63202655 - AluJb SINE Alu -52 260 142 1745 154 0 0 chr17 22235859 22236119 -63202361 + AluSx SINE Alu 28 287 -25 180 0 0 0 chr17 22236123 22236143 -63202337 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 521 268 62 64 chr17 22236446 22236753 -63201727 + L1MC4a LINE L1 5598 5777 -407 299 177 32 16 chr17 22236747 22236809 -63201671 + L1MB7 LINE L1 3606 3668 -2478 * 688 170 0 111 chr17 22236811 22236982 -63201498 + L1M4 LINE L1 4716 4867 -1279 2854 216 93 19 chr17 22237005 22237787 -63200693 + L1MB7 LINE L1 3723 4562 -1584 1461 98 0 10 chr17 22237789 22237983 -63200497 + AluSq SINE Alu 1 192 -121 1477 202 15 4 chr17 22238016 22238311 -63200169 + AluJb SINE Alu 12 309 0 558 182 45 8 chr17 22238335 22238467 -63200013 + L1MB7 LINE L1 5196 5332 -814 779 142 0 0 chr17 22238468 22238574 -63199906 + FLAM_C SINE Alu 2 107 -36 2298 105 3 0 chr17 22238579 22238884 -63199596 + AluSq SINE Alu 1 306 -7 2142 123 0 16 chr17 22238888 22239204 -63199276 + AluSx SINE Alu 1 311 -1 3153 169 100 42 chr17 22239205 22239545 -63198935 + L1MB7 LINE L1 5318 5637 -547 2194 98 24 10 chr17 22239545 22239842 -63198638 + AluSx SINE Alu 1 301 -11 3153 169 100 42 chr17 22239842 22240310 -63198170 + L1MB7 LINE L1 5637 6173 -11 986 209 44 29 chr17 22240315 22240588 -63197892 + L1ME3A LINE L1 5894 6170 0 2245 102 0 37 chr17 22240647 22240969 -63197511 + AluSg SINE Alu 1 310 0 241 297 145 36 chr17 22241228 22241366 -63197114 + MIR SINE MIR 59 211 -51 830 129 0 16 chr17 22241462 22241586 -63196894 + AluJo/FLAM SINE Alu 12 133 -179 866 177 186 53 chr17 22241589 22241672 -63196808 + AluJo SINE Alu 44 115 -197 2146 104 3 0 chr17 22241672 22241959 -63196521 - AluSg SINE Alu -22 288 1 866 177 186 53 chr17 22241959 22242101 -63196379 + AluJo SINE Alu 115 299 -13 2298 119 0 0 chr17 22242330 22242641 -63195839 - AluSx SINE Alu -1 311 1 2214 112 7 7 chr17 22243119 22243422 -63195058 + AluSx SINE Alu 1 303 -9 290 321 113 12 chr17 22243574 22243742 -63194738 - L1MC/D LINE L1 -2116 5692 5508 25 31 0 0 chr17 22243793 22243825 -63194655 + AT_rich Low_complexity Low_complexity 1 32 0 2325 108 0 0 chr17 22243962 22244269 -63194211 - AluSq SINE Alu -6 307 1 295 276 204 0 chr17 22244286 22244384 -63194096 + L2 LINE L2 3151 3268 -4 24 0 0 0 chr17 22244860 22244884 -63193596 + AT_rich Low_complexity Low_complexity 1 24 0 2357 84 3 0 chr17 22244884 22245171 -63193309 - AluSp SINE Alu -25 288 1 1036 156 0 0 chr17 22245317 22245471 -63193009 - AluJb SINE Alu -31 281 128 472 273 30 30 chr17 22245516 22245681 -63192799 - MIR SINE MIR 0 262 98 1893 152 4 0 chr17 22245683 22245960 -63192520 + AluSx SINE Alu 3 280 -32 261 0 0 0 chr17 22245960 22245989 -63192491 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 5968 84 63 1 chr17 22246001 22246859 -63191621 - Tigger3b DNA MER2_type -46 1185 275 245 143 0 0 chr17 22246861 22246896 -63191584 - Tigger3b DNA MER2_type -1132 99 65 227 295 0 0 chr17 22246896 22246991 -63191489 + T-rich Low_complexity Low_complexity 1 95 0 380 194 83 0 chr17 22247007 22247079 -63191401 - Tigger3b DNA MER2_type -1153 78 1 2441 99 0 0 chr17 22248170 22248482 -63189998 + AluSx SINE Alu 1 312 0 562 283 45 7 chr17 22248673 22248840 -63189640 + MIR3 SINE MIR 18 186 -39 314 328 8 33 chr17 22248812 22248934 -63189546 + MER5A DNA MER1_type 21 139 -50 * 1553 108 0 9 chr17 22248956 22249168 -63189312 - AluSq SINE Alu -94 219 10 2266 110 0 0 chr17 22249188 22249487 -63188993 - AluSx SINE Alu -13 299 1 184 235 24 129 chr17 22249488 22249573 -63188907 - MER5A DNA MER1_type -113 76 1 1891 131 16 20 chr17 22249677 22249982 -63188498 - AluJb SINE Alu -8 304 1 209 267 279 0 chr17 22250556 22250642 -63187838 + L2 LINE L2 3155 3264 -8 520 308 121 21 chr17 22253208 22253581 -63184899 + L1ME LINE L1 5305 5714 -407 425 272 103 0 chr17 22253663 22253799 -63184681 + L2 LINE L2 1164 1313 -2001 4614 161 28 28 chr17 22253807 22253845 -63184635 + MER21B LTR ERV1 1 38 -825 1674 170 41 0 chr17 22253845 22254139 -63184341 - AluJo SINE Alu -6 306 1 4614 161 28 28 chr17 22254139 22254914 -63183566 + MER21B LTR ERV1 37 814 -49 969 239 97 10 chr17 22254962 22255271 -63183209 + L2 LINE L2 1331 1666 -1648 1965 83 11 23 chr17 22255338 22255627 -63182853 + AluSc SINE Alu 19 304 0 404 196 9 37 chr17 22255630 22255737 -63182743 + L2 LINE L2 2453 2556 -758 252 259 35 0 chr17 22255977 22256035 -63182445 - MIR SINE MIR -74 134 75 320 197 122 48 chr17 22256914 22257061 -63181419 + MER112 DNA MER1_type 6 163 -97 309 219 10 62 chr17 22257109 22257205 -63181275 - L1MC4 LINE L1 -1338 6704 6614 198 0 0 0 chr17 22257205 22257227 -63181253 + (TA)n Simple_repeat Simple_repeat 2 23 0 * 216 0 0 0 chr17 22257226 22257250 -63181230 + (T)n Simple_repeat Simple_repeat 1 24 0 812 270 108 0 chr17 22257310 22257532 -63180948 + MIR SINE MIR 6 251 -11 189 0 0 0 chr17 22257608 22257629 -63180851 + (T)n Simple_repeat Simple_repeat 1 21 0 1937 117 24 0 chr17 22258626 22258917 -63179563 + HSMAR2 DNA Mariner 4 301 -1001 272 28 0 0 chr17 22258915 22258951 -63179529 + AluY SINE Alu 261 296 -5 * 1285 264 77 39 chr17 22259813 22260437 -63178043 + L1ME LINE L1 938 1555 -4988 2362 81 7 7 chr17 22260440 22260747 -63177733 + AluSc SINE Alu 1 307 -2 417 218 38 97 chr17 22260824 22260971 -63177509 + L1ME LINE L1 2262 2416 -4124 1497 104 5 10 chr17 22260971 22261172 -63177308 + AluSx SINE Alu 1 200 -112 194 61 0 30 chr17 22261173 22261206 -63177274 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 417 218 38 97 chr17 22261206 22261249 -63177231 + L1ME LINE L1 2416 2460 -4080 9198 48 11 165 chr17 22261249 22262863 -63175617 + SVA Other Other 19 1384 -2 417 218 38 97 chr17 22262863 22262958 -63175522 + L1ME LINE L1 2460 2533 -4007 21 57 0 0 chr17 22262968 22263003 -63175477 + AT_rich Low_complexity Low_complexity 1 35 0 3722 222 78 44 chr17 22263039 22263132 -63175348 + L1ME LINE L1 2565 2653 -3887 2067 117 3 3 chr17 22263132 22263456 -63175024 + AluSq SINE Alu 1 324 0 3722 222 78 44 chr17 22263456 22264701 -63173779 + L1ME LINE L1 2653 3910 -2630 2059 147 0 3 chr17 22264701 22265000 -63173480 + AluSx SINE Alu 2 299 -13 3722 222 78 44 chr17 22265000 22265144 -63173336 + L1ME LINE L1 3910 4048 -2492 1402 213 67 53 chr17 22265137 22265438 -63173042 + L1ME LINE L1 5115 5425 -1115 * 2333 88 0 30 chr17 22265438 22265743 -63172737 - AluY SINE Alu -15 296 1 1402 213 67 53 chr17 22265743 22265877 -63172603 + L1ME LINE L1 5425 5556 -984 327 247 118 17 chr17 22265879 22265892 -63172588 + L1ME1 LINE L1 5928 5938 -246 2354 100 0 7 chr17 22265892 22266202 -63172278 + AluSx SINE Alu 5 312 0 327 247 118 17 chr17 22266202 22266390 -63172090 + L1ME1 LINE L1 5938 6152 -32 2056 109 0 0 chr17 22266530 22266795 -63171685 + AluSg SINE Alu 26 290 -20 489 264 44 13 chr17 22266944 22267103 -63171377 - MER46C DNA MER2_type -12 326 163 307 314 69 32 chr17 22267134 22267481 -63170999 + L1MEd LINE L1 541 900 -5219 741 189 0 15 chr17 22267510 22267642 -63170838 - FLAM_A SINE Alu -3 130 1 1397 104 6 0 chr17 22267674 22267856 -63170624 + AluSq SINE Alu 2 184 -129 225 94 0 0 chr17 22267859 22267891 -63170589 + (GGGA)n Simple_repeat Simple_repeat 3 34 0 303 274 25 83 chr17 22268131 22268212 -63170268 + MIR SINE MIR 70 139 -123 2336 56 25 3 chr17 22268212 22268496 -63169984 + AluY SINE Alu 3 292 -19 303 274 25 83 chr17 22268496 22268571 -63169909 + MIR SINE MIR 139 217 -45 29 0 0 0 chr17 22268593 22268622 -63169858 + AT_rich Low_complexity Low_complexity 1 29 0 2227 105 10 13 chr17 22269790 22270103 -63168377 - AluSq SINE Alu -1 312 1 612 285 97 31 chr17 22270164 22270483 -63167997 + L1ME LINE L1 5772 6111 -404 26 64 0 0 chr17 22270538 22270585 -63167895 + AT_rich Low_complexity Low_complexity 1 47 0 281 162 73 0 chr17 22270847 22270915 -63167565 - L1MD2 LINE L1 0 6359 6287 855 135 8 0 chr17 22270915 22271041 -63167439 + AluJb SINE Alu 1 127 -185 3383 168 91 15 chr17 22271041 22271694 -63166786 - L1MD2 LINE L1 -60 6299 5697 1903 114 40 4 chr17 22271694 22272004 -63166476 + AluSq SINE Alu 1 320 0 2013 128 9 40 chr17 22272010 22272331 -63166149 + AluJb SINE Alu 1 311 -1 3383 168 91 15 chr17 22272331 22272395 -63166085 - L1MD2 LINE L1 -666 5693 5519 346 303 70 35 chr17 22272688 22272786 -63165694 - L1ME4a LINE L1 -205 5916 5823 1841 184 0 0 chr17 22272786 22273091 -63165389 + AluJo SINE Alu 3 307 -5 346 303 70 35 chr17 22273091 22273220 -63165260 - L1ME4a LINE L1 -298 5823 5681 390 129 0 0 chr17 22273220 22273282 -63165198 + (CA)n Simple_repeat Simple_repeat 2 63 0 335 288 124 20 chr17 22273283 22273594 -63164886 - L1ME4a LINE L1 -586 5580 5335 1165 125 0 0 chr17 22274162 22274330 -63164150 - AluSg/x SINE Alu -8 304 137 2166 120 0 3 chr17 22274563 22274872 -63163608 + AluSq SINE Alu 1 308 -5 2061 109 0 16 chr17 22275560 22275872 -63162608 + AluSg SINE Alu 1 307 -3 432 277 52 105 chr17 22276744 22276984 -63161496 - MIR SINE MIR 0 262 37 329 372 18 6 chr17 22277133 22277297 -63161183 + L2 LINE L2 2429 2594 -720 361 364 25 0 chr17 22277315 22277433 -63161047 + L2 LINE L2 3134 3254 -18 449 258 86 25 chr17 22277589 22277752 -63160728 - MIR3 SINE MIR -1 207 35 23 33 0 0 chr17 22278251 22278281 -63160199 + AT_rich Low_complexity Low_complexity 1 30 0 2179 107 3 0 chr17 22278551 22278859 -63159621 + AluSq SINE Alu 1 309 -4 2348 72 0 3 chr17 22278869 22279173 -63159307 + AluY SINE Alu 1 303 -8 221 238 0 0 chr17 22279558 22279600 -63158880 - L2 LINE L2 -255 3058 3017 769 287 36 9 chr17 22279640 22279863 -63158617 + MIR SINE MIR 34 262 0 2100 99 3 7 chr17 22280012 22280315 -63158165 + AluSx SINE Alu 1 302 -10 307 272 161 12 chr17 22280643 22280805 -63157675 - L2 LINE L2 -10 3303 3118 853 277 127 17 chr17 22280882 22281293 -63157187 + L2 LINE L2 2110 2565 -749 2088 135 0 0 chr17 22281491 22281802 -63156678 + AluSx SINE Alu 1 311 -1 1245 156 204 0 chr17 22281851 22282101 -63156379 - AluJo SINE Alu -1 301 1 2158 111 0 0 chr17 22282177 22282475 -63156005 + AluSx SINE Alu 1 298 -14 565 271 164 14 chr17 22282599 22282784 -63155696 - L1ME LINE L1 -376 5794 5638 1887 111 56 0 chr17 22282784 22283072 -63155408 + AluSx SINE Alu 1 304 -8 565 271 164 14 chr17 22283072 22283306 -63155174 - L1ME LINE L1 -532 5638 5312 2316 57 0 0 chr17 22283397 22283704 -63154776 - AluY SINE Alu 0 308 2 971 157 65 109 chr17 22283892 22283939 -63154541 + MER58A DNA MER1_type 1 49 -2371 1645 142 38 0 chr17 22283939 22284200 -63154280 - AluSx SINE Alu -11 301 31 971 157 65 109 chr17 22284200 22284382 -63154098 + MER58A DNA MER1_type 49 220 -4 196 359 39 10 chr17 22284589 22284692 -63153788 + L2 LINE L2 2963 3068 -245 963 257 59 64 chr17 22284693 22284872 -63153608 - L2 LINE L2 -711 2603 2425 2005 100 45 0 chr17 22284872 22285163 -63153317 + AluSq SINE Alu 1 304 -9 963 257 59 64 chr17 22285163 22285264 -63153216 - L2 LINE L2 -889 2425 2325 1295 72 169 0 chr17 22285264 22285459 -63153021 - MER30 DNA MER1_type -1 229 2 963 257 59 64 chr17 22285459 22285581 -63152899 - L2 LINE L2 -989 2325 2202 696 270 155 60 chr17 22285592 22285657 -63152823 + L2 LINE L2 2627 2684 -629 1235 163 139 4 chr17 22285657 22285915 -63152565 - AluJo SINE Alu -15 297 5 696 270 155 60 chr17 22285915 22285976 -63152504 + L2 LINE L2 2684 2738 -575 1481 202 27 0 chr17 22285976 22286268 -63152212 - AluJo SINE Alu -11 301 2 696 270 155 60 chr17 22286268 22286751 -63151729 + L2 LINE L2 2738 3308 -5 225 287 233 13 chr17 22286991 22287141 -63151339 - MIR3 SINE MIR -6 202 20 2015 98 20 20 chr17 22287155 22287460 -63151020 + AluSq SINE Alu 1 305 -8 2262 55 10 0 chr17 22287478 22287767 -63150713 - AluSp SINE Alu -21 292 1 186 263 105 0 chr17 22289672 22289729 -63148751 - MIR SINE MIR -64 144 82 3447 89 126 18 chr17 22289731 22290302 -63148178 - LTR10E LTR ERV1 0 633 1 1933 100 38 0 chr17 22290429 22290718 -63147762 + AluSx SINE Alu 1 300 -12 272 295 241 6 chr17 22290769 22290935 -63147545 - MIR SINE MIR -5 257 53 526 271 42 92 chr17 22291671 22291933 -63146547 - MIR SINE MIR -1 261 13 2316 80 3 0 chr17 22292357 22292659 -63145821 - AluSq SINE Alu -10 303 1 1835 126 39 18 chr17 22292833 22293119 -63145361 - AluSx SINE Alu -20 292 1 349 291 26 56 chr17 22293151 22293396 -63145084 + L1MEc LINE L1 1260 1511 -4885 1779 114 96 0 chr17 22293396 22293667 -63144813 + AluSx SINE Alu 1 297 -15 2405 53 0 3 chr17 22293669 22293971 -63144509 + AluY SINE Alu 1 301 -10 349 291 26 56 chr17 22293971 22294062 -63144418 + L1MEc LINE L1 1512 1589 -4807 1441 188 0 4 chr17 22294076 22294355 -63144125 + AluJb SINE Alu 30 307 0 287 196 98 18 chr17 22294355 22294439 -63144041 + L1MEc LINE L1 1587 1684 -4712 2087 113 0 10 chr17 22294439 22294741 -63143739 + AluSq SINE Alu 1 299 -14 287 196 98 18 chr17 22294741 22294768 -63143712 + L1MEc LINE L1 1684 1707 -4689 1979 127 0 10 chr17 22294779 22295078 -63143402 + AluSx SINE Alu 1 296 -16 1697 63 0 5 chr17 22295081 22295303 -63143177 + L1MA1 LINE L1 6077 6297 -5 27 0 0 0 chr17 22295306 22295333 -63143147 + AT_rich Low_complexity Low_complexity 1 27 0 1911 210 94 74 chr17 22295545 22295704 -63142776 - MER77 LTR ERV1 -4 601 447 1923 111 11 4 chr17 22295704 22295984 -63142496 + AluY SINE Alu 1 282 -29 1911 210 94 74 chr17 22295984 22296399 -63142081 - MER77 LTR ERV1 -158 447 41 645 290 47 0 chr17 22296431 22296600 -63141880 - HERV16 LTR ERVL -2127 2869 2693 2210 92 0 0 chr17 22296612 22296907 -63141573 - AluSx SINE Alu -13 299 5 2007 84 20 37 chr17 22296912 22297210 -63141270 - AluSx SINE Alu -14 298 6 436 186 9 69 chr17 22297227 22297339 -63141141 + MER33 DNA MER1_type 1 99 -97 1254 99 0 0 chr17 22297418 22297589 -63140891 - AluSc SINE Alu -6 303 133 2419 62 0 3 chr17 22297589 22297894 -63140586 - AluY SINE Alu -7 304 1 635 190 141 0 chr17 22297902 22298065 -63140415 - LTR10D LTR ERV1 -327 186 1 3524 143 76 7 chr17 22298208 22298802 -63139678 + MER41B LTR ERV1 1 635 0 586 111 0 0 chr17 22299704 22299785 -63138695 - AluSg SINE Alu -228 82 2 372 258 11 0 chr17 22300035 22300053 -63138427 - MIR3 SINE MIR -2 206 190 2082 121 14 0 chr17 22300053 22300350 -63138130 + AluSx SINE Alu 1 301 -11 372 258 11 0 chr17 22300350 22300420 -63138060 - MIR3 SINE MIR -18 190 117 598 251 37 60 chr17 22300812 22301027 -63137453 - MIR SINE MIR 0 262 53 2044 92 21 7 chr17 22301037 22301318 -63137162 + AluSx SINE Alu 1 285 -27 238 269 75 21 chr17 22301334 22301427 -63137053 + L2 LINE L2 2957 3054 -218 437 272 133 15 chr17 22301482 22301554 -63136926 - MIR SINE MIR -6 256 194 1899 116 3 3 chr17 22301554 22301838 -63136642 - AluSx SINE Alu -13 299 16 437 272 133 15 chr17 22301838 22301960 -63136520 - MIR SINE MIR -68 194 39 955 254 9 18 chr17 22301972 22302189 -63136291 + MER58A DNA MER1_type 1 215 -9 995 207 91 11 chr17 22302995 22303270 -63135210 - LTR65 LTR ERV1 -7 662 366 2048 133 0 0 chr17 22303270 22303571 -63134909 - AluSx SINE Alu -11 301 1 814 184 11 35 chr17 22303571 22303745 -63134735 - L1MB2 LINE L1 -344 5827 5658 642 133 0 0 chr17 22303745 22303850 -63134630 - AluSg/x SINE Alu 0 310 206 572 167 127 7 chr17 22303927 22304077 -63134403 + FAM SINE Alu 6 173 -12 1724 127 14 0 chr17 22304088 22304390 -63134090 + AluJo SINE Alu 6 311 0 1543 149 48 39 chr17 22304433 22304700 -63133780 - AluJo SINE Alu 0 407 134 2477 40 7 3 chr17 22304700 22305004 -63133476 - AluY SINE Alu -6 305 1 1543 149 48 39 chr17 22305004 22305140 -63133340 - AluJo SINE Alu -273 134 1 2216 98 3 0 chr17 22305184 22305491 -63132989 - AluSg SINE Alu -2 308 1 2336 85 0 0 chr17 22305756 22306063 -63132417 - AluSg SINE Alu -3 307 1 2332 78 0 3 chr17 22306072 22306378 -63132102 - AluSq SINE Alu -8 305 1 331 136 0 159 chr17 22306521 22306573 -63131907 - LTR67 LTR ERVL 0 557 523 2304 65 0 14 chr17 22306573 22306867 -63131613 - AluY SINE Alu -21 290 1 331 136 0 159 chr17 22306867 22306902 -63131578 - LTR67 LTR ERVL -34 523 484 2449 150 70 0 chr17 22306933 22307333 -63131147 - MSTC LTR MaLR 0 428 1 35 54 0 0 chr17 22307362 22307418 -63131062 + AT_rich Low_complexity Low_complexity 1 56 0 273 285 89 76 chr17 22307931 22308071 -63130409 - L1M4 LINE L1 -2050 4096 3959 2141 107 0 0 chr17 22308071 22308362 -63130118 - AluSx SINE Alu -21 291 1 273 285 89 76 chr17 22308362 22308512 -63129968 - L1M4 LINE L1 -2187 3959 3802 370 148 8 205 chr17 22308522 22308644 -63129836 - L2 LINE L2 -2 3311 3214 619 108 0 0 chr17 22308644 22308727 -63129753 + 5S rRNA rRNA 7 89 -32 4528 253 116 35 chr17 22308731 22308862 -63129618 - L2 LINE L2 -90 3223 3104 2174 108 0 7 chr17 22308862 22309169 -63129311 - AluSx SINE Alu -7 305 1 4528 253 116 35 chr17 22309169 22309911 -63128569 - L2 LINE L2 -209 3104 2424 2291 77 0 3 chr17 22309911 22310210 -63128270 + AluY SINE Alu 1 298 -13 4528 253 116 35 chr17 22310210 22310314 -63128166 - L2 LINE L2 -889 2424 2330 2052 113 7 0 chr17 22310314 22310607 -63127873 + AluSg SINE Alu 1 295 -15 4528 253 116 35 chr17 22310607 22310734 -63127746 - L2 LINE L2 -983 2330 2215 1817 142 17 0 chr17 22310734 22311023 -63127457 - AluJb SINE Alu -18 294 1 4528 253 116 35 chr17 22311023 22311823 -63126657 - L2 LINE L2 -1098 2215 1152 2158 109 0 0 chr17 22311885 22312187 -63126293 + AluSx SINE Alu 1 302 -10 2180 99 0 13 chr17 22312286 22312465 -63126015 - AluY SINE Alu -1 310 135 2155 81 3 36 chr17 22312465 22312773 -63125707 - AluSq SINE Alu -15 298 1 2180 99 0 13 chr17 22312773 22312907 -63125573 - AluY SINE Alu -176 135 1 798 126 0 70 chr17 22313028 22313171 -63125309 - FLAM_C SINE Alu 0 133 1 2020 122 0 0 chr17 22313196 22313483 -63124997 + AluSx SINE Alu 5 291 -21 2066 99 7 3 chr17 22313513 22313797 -63124683 - AluSg SINE Alu -17 293 9 300 310 0 11 chr17 22313865 22313952 -63124528 - L1M4 LINE L1 -3319 2827 2742 2093 114 0 7 chr17 22314066 22314374 -63124106 + AluSg SINE Alu 1 306 -4 372 287 23 8 chr17 22314768 22314897 -63123583 - MER94 DNA DNA 0 134 4 1797 162 3 0 chr17 22314926 22315222 -63123258 + AluJo SINE Alu 1 297 -15 1006 84 0 28 chr17 22315222 22315365 -63123115 + AluSg/x SINE Alu 147 285 -27 252 0 0 0 chr17 22315369 22315397 -63123083 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2228 102 7 0 chr17 22315538 22315843 -63122637 + AluSx SINE Alu 2 308 -4 1905 96 100 0 chr17 22316057 22316328 -63122152 + AluSx SINE Alu 1 298 -14 821 263 82 68 chr17 22316329 22316464 -63122016 + HAL1b LINE L1 245 377 -971 2302 88 0 0 chr17 22316464 22316770 -63121710 - AluY SINE Alu -5 306 1 821 263 82 68 chr17 22316770 22316989 -63121491 + HAL1b LINE L1 377 591 -757 1682 166 0 7 chr17 22316989 22317273 -63121207 - AluJo SINE Alu -30 282 1 821 263 82 68 chr17 22317273 22317477 -63121003 + HAL1b LINE L1 591 812 -536 232 189 14 81 chr17 22318028 22318102 -63120378 + L1MEc LINE L1 2449 2517 -3879 437 296 90 86 chr17 22318256 22318735 -63119745 + L1MEc LINE L1 3237 3697 -2518 573 132 19 28 chr17 22318735 22318841 -63119639 - FLAM_C SINE Alu -1 142 38 276 297 27 27 chr17 22318843 22318991 -63119489 + L1MEc LINE L1 3703 3850 -2365 687 180 41 67 chr17 22319254 22319448 -63119032 - MER20 DNA MER1_type -29 190 2 714 181 32 64 chr17 22319865 22320053 -63118427 - MER5A DNA MER1_type -3 186 5 23 33 0 0 chr17 22320385 22320415 -63118065 + GC_rich Low_complexity Low_complexity 1 30 0 345 276 106 54 chr17 22321773 22322672 -63115808 - L1MEc LINE L1 -2145 4395 3439 409 283 116 17 chr17 22322818 22322991 -63115489 - L1MEc LINE L1 -4583 2138 1949 329 240 40 40 chr17 22323013 22323028 -63115452 - L1MEc LINE L1 -6008 522 508 24 32 0 0 chr17 22323028 22323059 -63115421 + AT_rich Low_complexity Low_complexity 1 31 0 329 240 40 40 chr17 22323059 22323113 -63115367 - L1MEc LINE L1 -6021 509 423 252 257 88 59 chr17 22323185 22323647 -63114833 - L1MDa LINE L1 -3476 3064 2580 3756 156 46 46 chr17 22323647 22324361 -63114119 - L1MB2 LINE L1 -8 6163 5450 252 257 88 59 chr17 22324361 22324445 -63114035 - L1MDa LINE L1 -3960 2580 2500 1923 166 0 3 chr17 22324445 22324753 -63113727 - AluSx SINE Alu -5 307 1 1406 231 78 5 chr17 22324754 22325152 -63113328 - L1ME3A LINE L1 -343 5827 5401 652 260 113 71 chr17 22325452 22325715 -63112765 - HAL1 LINE L1 -838 1669 1379 2131 118 10 3 chr17 22325715 22326003 -63112477 - AluSx SINE Alu -20 292 3 652 260 113 71 chr17 22326003 22326174 -63112306 - HAL1 LINE L1 -1128 1379 1217 530 191 48 40 chr17 22326229 22326355 -63112125 - FRAM SINE Alu 0 176 50 2395 77 0 0 chr17 22326535 22326834 -63111646 - AluY SINE Alu -12 299 1 2255 85 3 26 chr17 22326880 22327186 -63111294 + AluY SINE Alu 1 299 -12 4021 127 83 40 chr17 22327242 22328509 -63109971 + LTR12 LTR ERV1 6 714 0 284 297 41 32 chr17 22328517 22328736 -63109744 - L1MC4a LINE L1 -1747 6061 5841 801 223 0 0 chr17 22329347 22329504 -63108976 - FRAM SINE Alu -18 158 2 2897 156 51 18 chr17 22329529 22330043 -63108437 - MER68 LTR ERV1 0 562 32 661 223 9 0 chr17 22330046 22330158 -63108322 + FLAM_C SINE Alu 2 114 -29 519 17 0 0 chr17 22330158 22330218 -63108262 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 289 81 0 0 chr17 22330223 22330260 -63108220 - MER68 LTR ERV1 -523 39 3 2188 119 7 0 chr17 22331280 22331582 -63106898 - AluSg SINE Alu -6 304 1 2581 137 45 33 chr17 22331802 22332227 -63106253 - Tigger2a DNA MER2_type 0 434 5 504 316 76 8 chr17 22332351 22332601 -63105879 - L1MC4a LINE L1 -375 5787 5521 267 0 70 0 chr17 22332611 22332654 -63105826 + (TA)n Simple_repeat Simple_repeat 2 47 0 1044 84 0 0 chr17 22332655 22332786 -63105694 - AluSc SINE Alu -178 131 1 2295 87 0 0 chr17 22332872 22333190 -63105290 - AluY SINE Alu 0 319 2 252 235 25 42 chr17 22333203 22333322 -63105158 - L1P4 LINE L1 -735 5431 5315 377 172 0 0 chr17 22333512 22333576 -63104904 + Charlie8 DNA MER1_type 82 145 -2272 621 226 15 8 chr17 22334034 22334167 -63104313 - MER58B DNA MER1_type -1 340 207 372 277 97 75 chr17 22334292 22334570 -63103910 - L2 LINE L2 -16 3256 2973 316 308 58 41 chr17 22334859 22335031 -63103449 + L1M4 LINE L1 3663 3837 -2309 657 278 96 32 chr17 22335469 22335912 -63102568 + LTR33A LTR ERVL 25 514 -9 1106 167 4 108 chr17 22336079 22336319 -63102161 + MLT1B LTR MaLR 173 387 -3 3951 170 20 14 chr17 22336325 22337134 -63101346 - L1MB7 LINE L1 -186 5998 5188 1754 145 15 5 chr17 22337143 22338023 -63100457 - L1MA5 LINE L1 -5 6295 5366 571 139 29 44 chr17 22338029 22338166 -63100314 + L1M4 LINE L1 4660 4794 -1352 * 3624 148 71 1 chr17 22338163 22338824 -63099656 - L1MA5 LINE L1 -776 5370 4664 1245 225 9 9 chr17 22338816 22339131 -63099349 - L1MB7 LINE L1 -941 5205 4891 * 242 214 0 0 chr17 22339155 22339197 -63099283 + AluJ/monomer SINE Alu 1 42 -260 286 244 12 24 chr17 22339197 22339279 -63099201 - L1M4c LINE L1 -1175 5207 5127 914 168 0 0 chr17 22339303 22339446 -63099034 + FLAM_C SINE Alu 1 143 0 2391 223 27 30 chr17 22339461 22339711 -63098769 - L1M4c LINE L1 -1298 5084 4835 2345 103 3 0 chr17 22339711 22340012 -63098468 - AluSp SINE Alu -11 302 1 2391 223 27 30 chr17 22340012 22340425 -63098055 - L1M4c LINE L1 -1547 4835 4423 1437 266 52 4 chr17 22340411 22340893 -63097587 - L1M4c LINE L1 -2534 3848 3344 * 883 264 18 9 chr17 22340894 22341121 -63097359 + MLT1C LTR MaLR 239 467 0 360 335 78 16 chr17 22341123 22341368 -63097112 - L1M4c LINE L1 -4271 2292 2033 22 0 0 0 chr17 22341368 22341390 -63097090 + AT_rich Low_complexity Low_complexity 1 22 0 387 278 104 26 chr17 22341492 22341772 -63096708 - L1M4c LINE L1 -4471 2092 1645 235 65 109 0 chr17 22341787 22341833 -63096647 - L1MB4 LINE L1 -1 6179 6129 2137 137 3 0 chr17 22341938 22342244 -63096236 - AluSx SINE Alu -5 307 1 3047 211 38 40 chr17 22342250 22342265 -63096215 - L1MB3 LINE L1 -36 6958 6944 1661 80 0 9 chr17 22342265 22342477 -63096003 - AluSq SINE Alu -8 305 96 3047 211 38 40 chr17 22342477 22343829 -63094651 - L1MB3 LINE L1 -50 6944 1379 213 196 0 0 chr17 22343829 22343875 -63094605 + (TATG)n Simple_repeat Simple_repeat 3 48 0 * 216 97 0 0 chr17 22343874 22343905 -63094575 + (CA)n Simple_repeat Simple_repeat 2 32 0 2272 98 7 0 chr17 22343919 22344214 -63094266 - AluSq SINE Alu -16 297 1 1229 231 148 37 chr17 22344214 22344360 -63094120 - L1MB3 LINE L1 -5463 1396 1268 2571 137 43 28 chr17 22344360 22344782 -63093698 - MSTB1 LTR MaLR 0 432 5 1229 231 148 37 chr17 22344782 22345041 -63093439 - L1MB3 LINE L1 -5591 1268 946 2321 95 0 7 chr17 22345043 22345347 -63093133 - AluSg SINE Alu -8 302 1 395 182 26 0 chr17 22345358 22345435 -63093045 - L1MC4 LINE L1 0 8042 7964 299 119 0 0 chr17 22345439 22345481 -63092999 - Alu SINE Alu -260 42 1 2456 239 49 12 chr17 22345494 22345543 -63092937 - L1MDa LINE L1 -1038 5502 5456 2321 109 3 0 chr17 22345543 22345855 -63092625 - AluSp SINE Alu 0 313 1 2456 239 49 12 chr17 22345855 22346561 -63091919 - L1MDa LINE L1 -1084 5456 4719 751 172 0 25 chr17 22346561 22346683 -63091797 - FAM SINE Alu -13 172 54 266 192 13 90 chr17 22346694 22346772 -63091708 - L1MDa LINE L1 -1819 4721 4650 1912 101 76 4 chr17 22346784 22347061 -63091419 - AluSg SINE Alu -13 297 1 1902 150 17 0 chr17 22347086 22347380 -63091100 - AluSx SINE Alu -13 299 1 1429 143 136 0 chr17 22347391 22347664 -63090816 - L1MA8 LINE L1 -4 6287 5978 2284 198 37 36 chr17 22347666 22348228 -63090252 - L1MDa LINE L1 -1900 4640 4078 1153 111 7 0 chr17 22348248 22348401 -63090079 - AluSq SINE Alu -159 154 1 365 239 23 0 chr17 22348456 22348544 -63089936 - MER66B LTR ERV1 -141 345 256 639 232 0 7 chr17 22348544 22348682 -63089798 - L1MDa LINE L1 -2506 4034 3898 1725 230 99 48 chr17 22348871 22349351 -63089129 - L1MDa LINE L1 -2652 3888 3359 2069 104 20 7 chr17 22349351 22349650 -63088830 - AluSg SINE Alu -7 303 1 1725 230 99 48 chr17 22349650 22349879 -63088601 - L1MDa LINE L1 -3181 3359 3143 864 195 29 75 chr17 22349879 22350120 -63088360 - L1MB8 LINE L1 0 6178 5949 * 912 220 41 8 chr17 22350100 22350345 -63088135 - L1MDa LINE L1 -3391 3149 2897 9186 180 98 73 chr17 22350355 22350507 -63087973 - L1MDa LINE L1 -3890 2831 2684 1872 140 17 20 chr17 22350507 22350807 -63087673 - AluSx SINE Alu -13 299 1 9186 180 98 73 chr17 22350807 22352196 -63086284 - L1MDa LINE L1 -4037 2684 1330 2256 77 3 27 chr17 22352196 22352493 -63085987 - AluSp SINE Alu -23 290 1 9186 180 98 73 chr17 22352493 22352571 -63085909 - L1MDa LINE L1 -5391 1330 1255 2338 76 13 7 chr17 22352571 22352875 -63085605 - AluY SINE Alu -5 306 1 9186 180 98 73 chr17 22352875 22353972 -63084508 - L1MDa LINE L1 -5466 1255 1 330 353 72 7 chr17 22354029 22354182 -63084298 - L1MC4 LINE L1 -478 7564 7402 1390 278 88 8 chr17 22354218 22354715 -63083765 - L1MC4 LINE L1 -722 7320 6784 225 360 80 8 chr17 22354864 22354989 -63083491 + L2 LINE L2 3125 3258 -14 461 261 118 17 chr17 22356175 22356442 -63082038 - L1MB8 LINE L1 -303 5881 5576 714 187 8 8 chr17 22357072 22357195 -63081285 - FLAM_A SINE Alu -10 123 1 30 45 0 0 chr17 22357205 22357249 -63081231 + AT_rich Low_complexity Low_complexity 1 44 0 893 294 180 20 chr17 22357365 22358000 -63080480 - L2 LINE L2 -1 3312 2574 438 305 112 34 chr17 22358129 22358556 -63079924 - HAL1b LINE L1 -772 576 107 2068 72 0 0 chr17 22358556 22358805 -63079675 - AluY SINE Alu -20 291 43 438 305 112 34 chr17 22358805 22358849 -63079631 - HAL1b LINE L1 -1241 107 68 2524 64 0 0 chr17 22359087 22359383 -63079097 - AluY SINE Alu -15 296 1 1883 133 53 0 chr17 22359575 22359860 -63078620 + AluJo SINE Alu 1 300 -12 925 244 47 73 chr17 22360014 22360270 -63078210 - L1MC4 LINE L1 -2156 5652 5410 565 170 198 0 chr17 22360270 22360376 -63078104 + FLAM_A SINE Alu 1 127 -6 925 244 47 73 chr17 22360376 22360528 -63077952 - L1MC4 LINE L1 -2398 5410 5255 356 281 119 73 chr17 22360642 22360759 -63077721 - L1MC4 LINE L1 -1014 5132 5022 2212 97 23 7 chr17 22360759 22361067 -63077413 - AluSp SINE Alu 0 313 1 356 281 119 73 chr17 22361067 22361089 -63077391 - L1MC4 LINE L1 -1124 5022 5002 633 121 0 10 chr17 22361089 22361188 -63077292 + L1PA5 LINE L1 6057 6154 0 356 281 119 73 chr17 22361188 22361432 -63077048 - L1MC4 LINE L1 -1144 5002 4730 1097 42 14 0 chr17 22361998 22362140 -63076340 + (TTTC)n Simple_repeat Simple_repeat 4 147 0 2047 124 7 0 chr17 22362142 22362425 -63076055 - AluSq SINE Alu -28 285 1 465 249 202 0 chr17 22362556 22362729 -63075751 - L2 LINE L2 0 3313 3106 613 292 43 36 chr17 22362791 22363038 -63075442 + MIR SINE MIR 3 249 -13 324 343 217 10 chr17 22364267 22364350 -63074130 + L2 LINE L2 2281 2346 -968 2388 197 100 28 chr17 22364350 22364879 -63073601 + MLT1F1 LTR MaLR 1 567 0 324 343 217 10 chr17 22364879 22365186 -63073294 + L2 LINE L2 2346 2752 -562 1286 150 68 18 chr17 22365616 22365836 -63072644 - AluJb SINE Alu -14 298 68 872 178 6 24 chr17 22365836 22365852 -63072628 - L1M3 LINE L1 -552 5616 5601 2465 150 11 56 chr17 22365852 22366320 -63072160 - L1MB1 LINE L1 -1 6167 5721 872 178 6 24 chr17 22366320 22366472 -63072008 - L1M3 LINE L1 -567 5601 5451 37 0 0 0 chr17 22367171 22367208 -63071272 + AT_rich Low_complexity Low_complexity 1 37 0 30 45 0 0 chr17 22367773 22367817 -63070663 + AT_rich Low_complexity Low_complexity 1 44 0 2482 67 0 13 chr17 22368110 22368425 -63070055 + AluY SINE Alu 1 311 0 1801 176 10 3 chr17 22368440 22368742 -63069738 - AluJo SINE Alu -8 304 1 1747 144 0 91 chr17 22369298 22369618 -63068862 + AluJb SINE Alu 1 291 -21 2949 134 126 21 chr17 22369664 22369778 -63068702 - MER1A DNA MER1_type -2174 526 425 2427 74 6 10 chr17 22369778 22370090 -63068390 - AluY SINE Alu 0 311 1 2949 134 126 21 chr17 22370090 22370451 -63068029 - MER1A DNA MER1_type -2275 425 1 1219 123 28 6 chr17 22370633 22370842 -63067638 + AluJo SINE Alu 100 312 0 866 170 0 0 chr17 22371315 22371450 -63067030 + AluJo SINE Alu 1 135 -177 2314 109 0 0 chr17 22372019 22372322 -63066158 - AluSx SINE Alu -9 303 1 1802 142 15 4 chr17 22572349 22572617 -62865863 - AluSx SINE Alu -39 273 3 2150 155 23 51 chr17 22572632 22572909 -62865571 + LOR1b LTR ERV1 41 303 -158 1962 131 4 0 chr17 22572909 22573184 -62865296 - AluSq SINE Alu -15 298 23 2150 155 23 51 chr17 22573184 22573339 -62865141 + LOR1b LTR ERV1 303 461 0 461 252 17 8 chr17 22573341 22573460 -62865020 - MLT1G1 LTR MaLR -74 521 402 1927 155 17 0 chr17 22573580 22573877 -62864603 - AluJb SINE Alu -10 302 1 1001 107 0 21 chr17 22573877 22574017 -62864463 - AluSq/x SINE Alu -175 137 1 1883 139 0 58 chr17 22574039 22574369 -62864111 - AluJb SINE Alu -1 311 1 404 267 78 0 chr17 22574377 22574493 -62863987 + L1ME3A LINE L1 6041 6165 -5 713 115 0 0 chr17 22574501 22574597 -62863883 + AluSq/x SINE Alu 40 135 -178 299 299 13 0 chr17 22574821 22574898 -62863582 - L2 LINE L2 -33 3239 3162 658 218 97 28 chr17 22574905 22575140 -62863340 + MLT1F1 LTR MaLR 208 503 -64 207 0 0 0 chr17 22575140 22575163 -62863317 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 658 218 97 28 chr17 22575163 22575232 -62863248 + MLT1F1 LTR MaLR 503 566 -1 427 253 99 39 chr17 22575298 22575386 -62863094 - MIR SINE MIR -6 256 175 2407 94 0 0 chr17 22575386 22575683 -62862797 + AluY SINE Alu 1 297 -14 427 253 99 39 chr17 22575683 22575776 -62862704 - MIR SINE MIR -87 175 64 1971 154 29 61 chr17 22575889 22576266 -62862214 - MLT1A1 LTR MaLR 0 365 1 1075 191 86 120 chr17 22576401 22576737 -62861743 + MLT1G LTR MaLR 3 313 -277 1903 85 4 0 chr17 22576859 22577095 -62861385 + AluSq SINE Alu 66 302 -11 475 219 25 34 chr17 22577095 22577214 -62861266 + L1ME1 LINE L1 6047 6164 -2 1926 151 0 46 chr17 22577215 22577540 -62860940 + AluJo SINE Alu 2 311 -1 1129 230 29 89 chr17 22577973 22578484 -62859996 - MLT1G3 LTR MaLR 0 595 5 2131 119 0 7 chr17 22578610 22578904 -62859576 - AluSx SINE Alu -20 292 1 906 256 120 3 chr17 22579250 22579558 -62858922 + LTR16C LTR ERVL 146 489 -2 2129 136 118 20 chr17 22579643 22580033 -62858447 - MSTA LTR MaLR 0 428 1 647 283 97 90 chr17 22580106 22580541 -62857939 + L2 LINE L2 2812 3249 -23 1674 64 0 86 chr17 22580622 22580855 -62857625 + AluSq SINE Alu 18 230 -83 684 160 84 0 chr17 22580956 22581087 -62857393 + MSTA LTR MaLR 286 427 -1 235 246 18 0 chr17 22581113 22581170 -62857310 - MLT1G1 LTR MaLR -537 58 1 1277 254 150 13 chr17 22581203 22581656 -62856824 + LTR33A LTR ERVL 9 523 0 2263 204 107 6 chr17 22581972 22582458 -62856022 + MLT1F LTR MaLR 1 535 -7 22 0 0 0 chr17 22582601 22582623 -62855857 + AT_rich Low_complexity Low_complexity 1 22 0 934 153 0 0 chr17 22582720 22582851 -62855629 + FLAM_A SINE Alu 1 131 -2 462 274 44 38 chr17 22583313 22583686 -62854794 + L1ME LINE L1 5255 5668 -453 256 186 382 0 chr17 22583703 22583805 -62854675 - L2 LINE L2 -3 3310 3170 806 176 138 0 chr17 22584005 22584164 -62854316 + REP3 LTR ERV 3 183 -379 1935 155 10 52 chr17 22584170 22584570 -62853910 - MLT1B LTR MaLR -6 384 2 1660 199 25 53 chr17 22584570 22584845 -62853635 + REP3 LTR ERV 178 440 -122 2296 123 0 0 chr17 22584845 22585154 -62853326 - AluSx SINE Alu -3 309 1 1660 199 25 53 chr17 22585154 22585274 -62853206 + REP3 LTR ERV 440 562 0 1707 111 0 0 chr17 22585927 22586152 -62852328 - AluY SINE Alu -86 225 1 257 340 64 43 chr17 22586212 22586353 -62852127 + L2 LINE L2 3098 3241 -31 2420 149 55 73 chr17 22586360 22586614 -62851866 + L1MC2 LINE L1 5782 6039 -305 2115 100 7 4 chr17 22586614 22586922 -62851558 - AluSc SINE Alu 0 309 1 2420 149 55 73 chr17 22586922 22587229 -62851251 + L1MC2 LINE L1 6039 6334 -10 207 0 0 0 chr17 22587255 22587278 -62851202 + (TG)n Simple_repeat Simple_repeat 2 24 0 264 30 0 0 chr17 22587294 22587327 -62851153 + (GA)n Simple_repeat Simple_repeat 2 34 0 1204 189 19 5 chr17 22587457 22587669 -62850811 + AluJb SINE Alu 86 300 -12 2241 105 0 0 chr17 22588039 22588325 -62850155 + AluSx SINE Alu 11 296 -16 354 246 123 23 chr17 22588862 22588992 -62849488 + L3b LINE CR1 1150 1292 -291 960 246 69 58 chr17 22588995 22589443 -62849037 - LTR16A1 LTR ERVL 0 457 5 895 231 10 26 chr17 22589773 22589968 -62848512 - MIR SINE MIR -35 227 36 217 278 0 19 chr17 22590091 22590145 -62848335 - MER5A DNA MER1_type -6 183 131 430 189 31 49 chr17 22590186 22590303 -62848177 + MIR SINE MIR 34 148 -61 748 133 0 0 chr17 22590305 22590410 -62848070 + FLAM_C SINE Alu 3 107 -36 1404 87 0 0 chr17 22590511 22590684 -62847796 - AluSc SINE Alu -136 173 1 4655 247 90 53 chr17 22590732 22590847 -62847633 - HAL1 LINE L1 -520 1987 1878 2065 97 55 17 chr17 22590847 22591137 -62847343 - AluSx SINE Alu -11 301 1 4655 247 90 53 chr17 22591137 22591584 -62846896 - HAL1 LINE L1 -629 1878 1449 1700 194 0 14 chr17 22591584 22591878 -62846602 - AluJo SINE Alu -22 290 1 4655 247 90 53 chr17 22591878 22592057 -62846423 - HAL1 LINE L1 -1058 1449 1278 1966 167 0 0 chr17 22592057 22592356 -62846124 - AluJb SINE Alu -13 299 1 4655 247 90 53 chr17 22592356 22592594 -62845886 - HAL1 LINE L1 -1229 1278 1050 297 0 0 0 chr17 22592594 22592627 -62845853 + (TG)n Simple_repeat Simple_repeat 1 33 0 4655 247 90 53 chr17 22592627 22592838 -62845642 - HAL1 LINE L1 -1457 1050 848 963 228 0 0 chr17 22592838 22593027 -62845453 + MER5A DNA MER1_type 1 189 0 4655 247 90 53 chr17 22593027 22593661 -62844819 - HAL1 LINE L1 -1659 848 82 2253 78 0 7 chr17 22593661 22593955 -62844525 + AluY SINE Alu 1 292 -19 4655 247 90 53 chr17 22593955 22594037 -62844443 - HAL1 LINE L1 -2425 82 5 2344 59 0 74 chr17 22594438 22594762 -62843718 + AluY SINE Alu 1 300 -11 986 141 4 137 chr17 22597660 22597782 -62840698 + MLT1B LTR MaLR 1 138 -252 2304 103 0 3 chr17 22597782 22598082 -62840398 + AluSq SINE Alu 1 299 -14 986 141 4 137 chr17 22598082 22598204 -62840276 + MLT1B LTR MaLR 138 210 -180 2257 108 26 0 chr17 22598204 22598509 -62839971 + AluSq SINE Alu 1 313 0 986 141 4 137 chr17 22598509 22598526 -62839954 + MLT1B LTR MaLR 210 228 -162 296 71 0 0 chr17 22598510 22598552 -62839928 - MADE1 DNA Mariner -37 43 2 * 1948 150 3 23 chr17 22598833 22599140 -62839340 + AluJb SINE Alu 5 305 -7 563 223 23 46 chr17 22599281 22599456 -62839024 - MLT2E LTR ERVL 0 628 458 1107 246 46 4 chr17 22599520 22599801 -62838679 - MLT2E LTR ERVL -326 302 10 231 125 0 0 chr17 22600084 22600116 -62838364 + MLT1G1 LTR MaLR 1 32 -563 904 179 55 55 chr17 22600116 22600334 -62838146 + MLT1B LTR MaLR 1 218 -172 1553 136 0 30 chr17 22600503 22600738 -62837742 - AluSx SINE Alu -84 228 1 2219 107 0 0 chr17 22600821 22601126 -62837354 - AluSc SINE Alu 0 305 1 1255 103 11 27 chr17 22601129 22601314 -62837166 - AluSg/x SINE Alu -11 301 120 1707 164 66 0 chr17 22601352 22601638 -62836842 - AluJb SINE Alu -7 305 1 2003 157 0 3 chr17 22601900 22602200 -62836280 + AluJo SINE Alu 1 299 -13 1074 145 30 15 chr17 22602201 22602401 -62836079 - L1MB5 LINE L1 -10 6164 5962 2633 160 28 2 chr17 22602420 22602890 -62835590 - L1MB3 LINE L1 -2 6181 5700 2638 50 0 0 chr17 22603063 22603363 -62835117 - AluY SINE Alu -11 300 1 2172 114 14 0 chr17 22603365 22603662 -62834818 - AluSx SINE Alu -11 301 1 826 157 0 8 chr17 22603777 22603911 -62834569 - FLAM_A SINE Alu 0 133 1 401 134 15 0 chr17 22605069 22605136 -62833344 - MLT1H1 LTR MaLR 0 555 488 279 79 0 0 chr17 22605170 22605208 -62833272 + (T)n Simple_repeat Simple_repeat 1 38 0 225 162 0 0 chr17 22605308 22605345 -62833135 - Alu SINE Alu -265 37 1 241 296 83 9 chr17 22605350 22605458 -62833022 - Charlie8 DNA MER1_type -2301 116 1 783 169 8 0 chr17 22605494 22605624 -62832856 - FLAM_C SINE Alu 0 133 3 2244 124 3 3 chr17 22605708 22606014 -62832466 - AluSx SINE Alu -6 306 1 1615 145 46 86 chr17 22606247 22606572 -62831908 - AluJo SINE Alu 0 312 1 1826 163 0 67 chr17 22606578 22606774 -62831706 - AluJb SINE Alu 0 312 145 2369 106 6 3 chr17 22606774 22607085 -62831395 - AluSx SINE Alu 0 312 1 1826 163 0 67 chr17 22607085 22607219 -62831261 - AluJb SINE Alu -167 145 4 355 248 26 60 chr17 22607867 22607984 -62830496 - MIR SINE MIR -1 261 149 499 289 113 4 chr17 22608406 22608645 -62829835 - L1ME4a LINE L1 0 6121 5857 1539 185 30 27 chr17 22608689 22608986 -62829494 + AluJo SINE Alu 1 298 -14 291 54 0 0 chr17 22609314 22609351 -62829129 + (TG)n Simple_repeat Simple_repeat 2 38 0 2558 64 0 13 chr17 22609730 22610043 -62828437 + AluY SINE Alu 1 309 -2 336 203 54 0 chr17 22610130 22610204 -62828276 + MIR SINE MIR 41 118 -90 208 293 35 0 chr17 22610221 22610279 -62828201 + L2 LINE L2 3201 3260 -12 464 186 20 20 chr17 22610450 22610552 -62827928 - U13 snRNA snRNA -2 102 1 235 294 0 0 chr17 22611333 22611384 -62827096 - MIR3 SINE MIR -8 200 150 261 255 105 6 chr17 22611549 22611690 -62826790 + MIR3 SINE MIR 54 176 -32 * 1071 215 33 16 chr17 22611628 22611870 -62826610 - MIR SINE MIR -15 247 2 249 175 0 53 chr17 22611870 22611916 -62826564 + L3 LINE CR1 1509 1551 -26 723 176 25 35 chr17 22613010 22613209 -62825271 + LTR37B LTR ERV1 272 468 0 484 207 240 40 chr17 22613605 22613755 -62824725 - MER5A DNA MER1_type -1 188 9 510 258 11 59 chr17 22613904 22614090 -62824390 - MIR SINE MIR -6 256 80 4016 85 3 38 chr17 22614381 22614856 -62823624 - MER41A LTR ERV1 0 554 101 2692 48 0 0 chr17 22614856 22615165 -62823315 + AluY SINE Alu 1 309 -2 4016 85 3 38 chr17 22615165 22615263 -62823217 - MER41A LTR ERV1 -453 101 1 360 257 71 64 chr17 22616309 22616449 -62822031 + MIR3 SINE MIR 6 146 -62 511 47 0 0 chr17 22616970 22617034 -62821446 - MLT1A1 LTR MaLR -28 337 274 743 32 11 0 chr17 22617348 22617442 -62821038 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 946 262 58 92 chr17 22617442 22617794 -62820686 + L2 LINE L2 2690 3052 -261 2519 76 0 0 chr17 22617794 22618098 -62820382 - AluY SINE Alu -7 304 1 946 262 58 92 chr17 22618098 22618109 -62820371 + L2 LINE L2 3052 3062 -251 2300 95 0 0 chr17 22618109 22618417 -62820063 - AluSx SINE Alu 0 308 1 946 262 58 92 chr17 22618417 22618703 -62819777 + L2 LINE L2 3062 3312 -1 528 285 145 1 chr17 22620075 22620261 -62818219 - MIR SINE MIR -10 252 42 180 250 9 121 chr17 22620335 22620451 -62818029 + MIR SINE MIR 109 211 -51 263 250 67 0 chr17 22620698 22620758 -62817722 - MER91C DNA MER1_type -38 102 39 24 0 0 0 chr17 22621002 22621026 -62817454 + GC_rich Low_complexity Low_complexity 1 24 0 234 314 85 8 chr17 22622270 22622388 -62816092 + MIR SINE MIR 96 222 -40 642 210 80 84 chr17 22622474 22622546 -62815934 - MLT1J LTR MaLR -3 508 437 271 0 0 0 chr17 22622546 22622576 -62815904 + (TTTTG)n Simple_repeat Simple_repeat 2 130 0 2228 88 0 34 chr17 22622576 22622871 -62815609 - AluSx SINE Alu -1 314 1 642 210 80 84 chr17 22622871 22623083 -62815397 - MLT1J LTR MaLR -72 439 224 1069 276 97 66 chr17 22623626 22623865 -62814615 + MER115 DNA AcHobo 20 250 -443 1773 189 25 11 chr17 22623865 22624224 -62814256 - MLT1A1 LTR MaLR 0 365 2 1069 276 97 66 chr17 22624224 22624572 -62813908 + MER115 DNA AcHobo 250 625 -68 296 175 10 134 chr17 22624711 22624733 -62813747 + Zaphod DNA AcHobo 3947 3970 -61 2296 97 3 7 chr17 22624733 22625033 -62813447 + AluSq SINE Alu 1 299 -14 296 175 10 134 chr17 22625033 22625107 -62813373 + Zaphod DNA AcHobo 3970 4031 0 2586 59 7 0 chr17 22625337 22625641 -62812839 + AluY SINE Alu 1 306 -5 1521 114 0 18 chr17 22626179 22626398 -62812082 - AluSg/x SINE Alu -15 297 83 2249 171 7 23 chr17 22626499 22626926 -62811554 + MLT1F LTR MaLR 100 519 -23 2068 195 39 17 chr17 22626925 22627386 -62811094 + MER110 LTR ERV1 21 491 0 * 2365 67 0 3 chr17 22627425 22627731 -62810749 - AluY SINE Alu 0 305 1 1396 186 84 7 chr17 22627733 22628008 -62810472 - AluJo SINE Alu -16 296 1 616 106 0 0 chr17 22628036 22628121 -62810359 - AluJ/FLAM SINE Alu -226 86 2 1015 157 56 0 chr17 22628170 22628348 -62810132 - MER3 DNA MER1_type -21 188 1 2378 85 0 0 chr17 22630057 22630350 -62808130 - AluSg SINE Alu -17 293 1 427 217 83 33 chr17 22630407 22630527 -62807953 - MER5B DNA MER1_type -48 130 5 911 119 0 8 chr17 22630603 22630737 -62807743 - FLAM_C SINE Alu 0 133 1 419 257 9 9 chr17 22630760 22630865 -62807615 + MIR SINE MIR 47 151 -111 921 176 43 32 chr17 22630876 22631063 -62807417 - MER5A DNA MER1_type 0 189 1 2129 110 40 20 chr17 22631620 22631920 -62806560 - AluSx SINE Alu -6 306 1 882 141 115 45 chr17 22632077 22632233 -62806247 + AluJb SINE Alu 9 175 -137 364 262 27 47 chr17 22632679 22632828 -62805652 + L2 LINE L2 3131 3276 -37 524 136 0 10 chr17 22632837 22632940 -62805540 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 1587 201 44 34 chr17 22632993 22633177 -62805303 - Charlie1 DNA MER1_type 0 2761 2580 1911 182 115 43 chr17 22633177 22633683 -62804797 + MLT1F LTR MaLR 1 542 0 1587 201 44 34 chr17 22633683 22633974 -62804506 - Charlie1 DNA MER1_type -181 2580 1 2326 81 0 71 chr17 22636096 22636283 -62802197 - AluSx SINE Alu -12 300 144 2033 107 29 0 chr17 22636283 22636555 -62801925 - AluSx SINE Alu -32 280 1 2326 81 0 71 chr17 22636555 22636690 -62801790 - AluSx SINE Alu -168 144 1 2562 66 0 0 chr17 22637078 22637383 -62801097 + AluY SINE Alu 1 305 -6 299 274 166 17 chr17 22637456 22637631 -62800849 - LTR67 LTR ERVL -5 552 352 360 0 0 0 chr17 22637792 22637832 -62800648 + (CA)n Simple_repeat Simple_repeat 2 41 0 423 284 164 0 chr17 22638014 22638130 -62800350 - MIR SINE MIR -120 142 8 205 272 114 26 chr17 22638262 22638376 -62800104 - MIR3 SINE MIR -82 126 3 809 266 78 78 chr17 22638493 22639007 -62799473 + LTR67 LTR ERVL 44 557 0 307 263 12 12 chr17 22640307 22640387 -62798093 + MIR SINE MIR 20 99 -163 228 164 0 110 chr17 22640423 22640496 -62797984 + MLT1G1 LTR MaLR 98 162 -387 665 194 185 58 chr17 22640546 22640876 -62797604 + MLT1G1 LTR MaLR 224 595 0 211 293 158 0 chr17 22640882 22640964 -62797516 + MIR SINE MIR 106 200 -62 531 301 82 6 chr17 22641258 22641441 -62797039 + MIR SINE MIR 49 245 -17 469 263 144 16 chr17 22641607 22641800 -62796680 + LTR16A LTR ERVL 25 242 -208 2273 164 62 31 chr17 22641800 22642282 -62796198 + MLT1D LTR MaLR 1 497 -8 652 188 122 35 chr17 22642296 22642493 -62795987 + LTR16A LTR ERVL 237 450 0 321 218 0 13 chr17 22642522 22642600 -62795880 - L1MC5 LINE L1 -46 7915 7839 2465 74 0 13 chr17 22642633 22642944 -62795536 - AluSp SINE Alu -6 307 1 393 320 7 20 chr17 22643354 22643504 -62794976 - MIR SINE MIR -34 228 81 1422 233 63 20 chr17 22643509 22643951 -62794529 - MLT1C LTR MaLR -1 466 6 1252 246 13 7 chr17 22644059 22644360 -62794120 + MLT1G LTR MaLR 1 303 -287 1264 107 17 6 chr17 22644363 22644541 -62793939 - AluSg/x SINE Alu -2 308 129 1124 175 106 22 chr17 22644546 22644820 -62793660 + MLT1G LTR MaLR 294 590 0 182 33 67 0 chr17 22644909 22644939 -62793541 + A-rich Low_complexity Low_complexity 3 34 0 453 215 74 54 chr17 22645863 22646188 -62792292 - MER34 LTR ERV1 0 542 265 943 174 56 0 chr17 22646221 22646399 -62792081 - MER34C LTR ERV1 -397 188 1 963 295 63 25 chr17 22647316 22647401 -62791079 - LTR16C LTR ERVL -79 412 332 2500 131 13 8 chr17 22647401 22647789 -62790691 + MLT1B LTR MaLR 1 390 0 963 295 63 25 chr17 22647789 22648100 -62790380 - LTR16C LTR ERVL -159 332 1 311 250 169 0 chr17 22648482 22648606 -62789874 - LTR67 LTR ERVL -4 553 409 864 208 147 94 chr17 22649110 22649452 -62789028 - MLT1G LTR MaLR -8 582 198 2360 91 0 0 chr17 22649452 22649767 -62788713 + AluSq SINE Alu 1 315 0 864 208 147 94 chr17 22649767 22649976 -62788504 - MLT1G LTR MaLR -392 198 1 954 96 0 15 chr17 22649985 22650121 -62788359 + FLAM_C SINE Alu 9 142 -1 435 266 73 51 chr17 22651250 22651392 -62787088 - MIR SINE MIR -21 241 93 2492 139 56 15 chr17 22651392 22651801 -62786679 - MSTB LTR MaLR 0 426 1 435 266 73 51 chr17 22651801 22651835 -62786645 - MIR SINE MIR -169 93 61 1652 144 70 0 chr17 22651933 22652203 -62786277 + AluJo SINE Alu 1 289 -23 271 307 30 0 chr17 22652225 22652326 -62786154 - MLT1J LTR MaLR -101 410 307 523 98 43 22 chr17 22652327 22652419 -62786061 - MER53 DNA DNA 0 189 96 1331 188 5 5 chr17 22652435 22652658 -62785822 - AluJb SINE Alu -13 299 77 37 52 0 0 chr17 22652666 22652724 -62785756 + AT_rich Low_complexity Low_complexity 1 58 0 836 224 142 29 chr17 22652745 22653026 -62785454 - MLT1J LTR MaLR -198 313 1 710 294 62 11 chr17 22653243 22653518 -62784962 + LTR16A1 LTR ERVL 138 426 -31 259 286 45 36 chr17 22653776 22653888 -62784592 - LTR33A LTR ERVL 0 523 411 259 256 26 77 chr17 22654066 22654107 -62784373 - MLT2E LTR ERVL -486 142 100 3395 188 17 21 chr17 22654107 22654500 -62783980 - MER82 DNA MER2_type 0 653 263 2270 114 0 22 chr17 22654500 22654816 -62783664 + AluSx SINE Alu 1 309 -3 3395 188 17 21 chr17 22654816 22655075 -62783405 - MER82 DNA MER2_type -390 263 4 259 256 26 77 chr17 22655075 22655150 -62783330 - MLT2E LTR ERVL -528 100 32 2108 267 75 29 chr17 22655262 22656322 -62782158 - L1MCb LINE L1 -4327 2795 1485 441 233 51 51 chr17 22656341 22656517 -62781963 - L1MCb LINE L1 -6228 195 20 998 224 77 112 chr17 22656750 22657312 -62781168 + MLT1H LTR MaLR 1 542 -7 861 244 0 15 chr17 22657313 22657510 -62780970 + MLT1J LTR MaLR 5 198 -313 2506 77 0 0 chr17 22658579 22658878 -62779602 + AluSx SINE Alu 1 299 -13 1024 50 0 0 chr17 22659139 22659259 -62779221 - AluY SINE Alu -190 121 2 585 300 45 0 chr17 22659260 22659460 -62779020 - L2 LINE L2 -1881 1433 1225 462 299 32 13 chr17 22659716 22659870 -62778610 - MIR SINE MIR -2 260 104 390 279 27 0 chr17 22660095 22660206 -62778274 + MER81 DNA DNA 1 114 0 1991 144 0 19 chr17 22660265 22660577 -62777903 - AluSq SINE Alu -7 306 1 281 167 0 0 chr17 22660741 22660789 -62777691 - MLT2B1 LTR ERVL 0 520 473 836 114 0 16 chr17 22660799 22660922 -62777558 - MLT2B1 LTR ERVL -242 278 158 1924 148 148 5 chr17 22660922 22661295 -62777185 - MSTB LTR MaLR 0 426 1 937 140 32 6 chr17 22661295 22661452 -62777028 - MLT2B1 LTR ERVL -358 162 2 413 306 35 29 chr17 22661595 22661765 -62776715 - MIR SINE MIR -47 215 45 415 240 43 70 chr17 22662352 22662571 -62775909 - LTR16A1 LTR ERVL -115 342 155 219 277 169 0 chr17 22662780 22662845 -62775635 + L2 LINE L2 3155 3230 -42 533 193 118 0 chr17 22663404 22663523 -62774957 + FLAM_C SINE Alu 1 133 0 2514 183 127 33 chr17 22663738 22664437 -62774043 - LTR50 LTR ERVL -24 771 7 2073 107 11 0 chr17 22664437 22664761 -62773719 + AluSx SINE Alu 1 327 0 2411 109 0 0 chr17 22665486 22665798 -62772682 + AluSx SINE Alu 1 312 0 234 41 41 41 chr17 22665821 22665870 -62772610 + (CAAAAA)n Simple_repeat Simple_repeat 4 52 0 294 276 95 57 chr17 22665880 22665985 -62772495 - L2 LINE L2 -38 3234 3126 437 118 0 0 chr17 22666108 22666176 -62772304 - MER53 DNA DNA 0 189 122 960 187 176 80 chr17 22666512 22666847 -62771633 + MLT2D LTR ERVL 2 479 -41 314 182 0 13 chr17 22666853 22666930 -62771550 + (TA)n Simple_repeat Simple_repeat 1 76 0 201 39 0 0 chr17 22666941 22666967 -62771513 + (TG)n Simple_repeat Simple_repeat 2 27 0 251 48 0 48 chr17 22666967 22667004 -62771476 + MLT2C1 LTR ERVL 355 389 -8 1901 166 27 27 chr17 22667882 22668256 -62770224 + MLT1A2 LTR MaLR 1 374 0 422 219 15 22 chr17 22668349 22668366 -62770114 - L1MA10 LINE L1 -2 6332 6316 1375 188 25 100 chr17 22668366 22668797 -62769683 - L1ME2 LINE L1 -9 6155 5757 777 291 83 28 chr17 22668852 22669689 -62768791 - L1ME3 LINE L1 -279 5883 5004 1057 48 0 0 chr17 22669766 22669891 -62768589 - AluY SINE Alu -11 300 176 2616 63 0 0 chr17 22670002 22670305 -62768175 - AluSg SINE Alu -7 303 1 249 298 141 53 chr17 22670305 22670604 -62767876 + L1ME2 LINE L1 3912 4236 -1910 769 233 81 91 chr17 22670607 22671224 -62767256 + L1ME2 LINE L1 4342 4952 -1194 1628 118 0 0 chr17 22671233 22671475 -62767005 + AluSq SINE Alu 63 304 0 1765 216 120 21 chr17 22671477 22671921 -62766559 + L1ME2 LINE L1 5280 5803 -367 2013 117 17 0 chr17 22671921 22672212 -62766268 + AluSx SINE Alu 1 296 -16 1765 216 120 21 chr17 22672212 22672382 -62766098 + L1ME2 LINE L1 5803 5955 -215 277 167 0 0 chr17 22672568 22672610 -62765870 - FLAM_A SINE Alu -15 118 77 230 242 15 30 chr17 22672621 22672687 -62765793 + L1ME2 LINE L1 6052 6116 -48 273 159 232 0 chr17 22672702 22672771 -62765709 - L1MB8 LINE L1 -1 6177 6093 1174 123 18 112 chr17 22672781 22673057 -62765423 - L1MB4 LINE L1 0 6180 5931 916 196 0 0 chr17 22675438 22675601 -62762879 - L1MB4 LINE L1 -237 5943 5781 331 229 29 0 chr17 22675601 22675671 -62762809 - MER2 DNA MER2_type 0 345 274 704 189 16 16 chr17 22675676 22675803 -62762677 + FLAM_A SINE Alu 7 133 -9 1227 102 87 15 chr17 22675843 22676039 -62762441 - MER2 DNA MER2_type -135 210 1 941 166 14 51 chr17 22676039 22676263 -62762217 - L1MB4 LINE L1 -398 5782 5548 824 209 121 47 chr17 22676271 22676330 -62762150 - L2 LINE L2 -1480 1834 1781 608 146 182 0 chr17 22676330 22676440 -62762040 - FLAM_A SINE Alu -3 130 1 824 209 121 47 chr17 22676440 22676677 -62761803 - L2 LINE L2 -1533 1781 1516 241 297 0 0 chr17 22676802 22676866 -62761614 - MIR3 SINE MIR -31 177 114 269 156 0 0 chr17 22676959 22677004 -62761476 + (TG)n Simple_repeat Simple_repeat 1 45 0 884 151 5 113 chr17 22677159 22677371 -62761109 - MER53 DNA DNA 0 189 1 224 370 56 6 chr17 22677907 22678069 -62760411 + MIR SINE MIR 64 233 -29 1877 103 88 0 chr17 22678240 22678512 -62759968 + AluSq SINE Alu 1 296 -17 2720 184 90 52 chr17 22678812 22679432 -62759048 + MLT1E1 LTR MaLR 3 646 -8 2135 127 0 6 chr17 22679585 22679899 -62758581 - AluSx SINE Alu 0 312 1 267 314 54 72 chr17 22680194 22680417 -62758063 + MLT1L LTR MaLR 1 219 -369 * 366 303 60 22 chr17 22680409 22680594 -62757886 + MLT1L LTR MaLR 424 615 0 323 226 141 63 chr17 22680626 22680680 -62757800 - MLT1J LTR MaLR -24 487 439 186 43 0 0 chr17 22680680 22680703 -62757777 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 323 226 141 63 chr17 22680703 22680969 -62757511 - MLT1J LTR MaLR -72 439 111 231 247 41 27 chr17 22680912 22680985 -62757495 - LTR67 LTR ERVL -385 172 99 * 184 366 10 0 chr17 22681171 22681272 -62757208 + L2 LINE L2 2213 2314 -1000 498 196 0 0 chr17 22681824 22681926 -62756554 + GA-rich Low_complexity Low_complexity 3 104 0 392 271 37 0 chr17 22681993 22682100 -62756380 + MIR3 SINE MIR 97 207 -1 2278 86 7 0 chr17 22682357 22682649 -62755831 + AluSg SINE Alu 1 294 -16 665 306 28 7 chr17 22682673 22682957 -62755523 - L1M4 LINE L1 -1095 5051 4762 332 216 93 55 chr17 22682986 22683222 -62755258 - L1M4 LINE L1 -1724 4422 4178 2295 133 109 122 chr17 22683235 22683703 -62754777 + MLT2D LTR ERVL 3 464 0 415 265 63 97 chr17 22683704 22683846 -62754634 - L1M4 LINE L1 -1977 4169 4024 1897 160 0 0 chr17 22683846 22684146 -62754334 - AluSx SINE Alu -12 300 1 415 265 63 97 chr17 22684146 22684392 -62754088 - L1M4 LINE L1 -2122 4024 3771 2374 68 0 0 chr17 22684392 22684685 -62753795 - AluY SINE Alu -18 293 1 415 265 63 97 chr17 22684685 22684814 -62753666 - L1M4 LINE L1 -2375 3771 3639 1704 124 70 24 chr17 22684814 22685112 -62753368 - AluSx SINE Alu 0 312 1 415 265 63 97 chr17 22685112 22685155 -62753325 - L1M4 LINE L1 -2507 3639 3596 3336 64 2 9 chr17 22685155 22685591 -62752889 + L1PA8 LINE L1 5738 6170 -2 415 265 63 97 chr17 22685591 22685713 -62752767 - L1M4 LINE L1 -2550 3596 3471 2285 64 10 0 chr17 22685713 22686010 -62752470 - AluY SINE Alu -11 300 1 415 265 63 97 chr17 22686010 22686143 -62752337 - L1M4 LINE L1 -2675 3471 3335 2408 58 3 0 chr17 22686143 22686437 -62752043 - AluY SINE Alu -16 295 1 415 265 63 97 chr17 22686437 22686572 -62751908 - L1M4 LINE L1 -2811 3335 3142 1669 260 29 14 chr17 22687671 22688114 -62750366 - LTR16A LTR ERVL 0 450 1 757 330 41 34 chr17 22688238 22688769 -62749711 - HERV16 LTR ERVL -381 5383 4849 2326 60 0 32 chr17 22688782 22689097 -62749383 - AluY SINE Alu -6 305 1 2133 119 3 0 chr17 22689150 22689460 -62749020 - AluSx SINE Alu -1 311 1 3437 207 39 13 chr17 22689654 22690506 -62747974 - L1M4 LINE L1 -989 5393 4520 1838 150 0 29 chr17 22690524 22690603 -62747877 - AluJo SINE Alu -8 304 224 7977 116 50 10 chr17 22690603 22691831 -62746649 + MER52C LTR ERV1 1 1278 0 1838 150 0 29 chr17 22691831 22692064 -62746416 - AluJo SINE Alu -88 224 1 764 211 0 32 chr17 22692094 22692250 -62746230 - MLT1D LTR MaLR -42 463 313 3069 217 42 10 chr17 22692352 22693136 -62745344 - L1M4 LINE L1 -2028 4354 3546 4860 83 0 29 chr17 22693156 22693852 -62744628 + L1PB1 LINE L1 5475 6150 -1 485 271 0 0 chr17 22693861 22693979 -62744501 + L1M4 LINE L1 3775 3892 -2254 501 212 20 0 chr17 22693984 22694135 -62744345 - L1M4 LINE L1 -2852 3530 3377 692 326 27 30 chr17 22694144 22694504 -62743976 - HERV16 LTR ERVL -1593 3694 3162 1266 281 92 19 chr17 22694511 22694757 -62743723 - HERV16 LTR ERVL -3546 1450 1223 1808 172 30 60 chr17 22694757 22695159 -62743321 - MLT1B LTR MaLR 0 390 1 1266 281 92 19 chr17 22695159 22695379 -62743101 - HERV16 LTR ERVL -3773 1223 950 1936 186 49 55 chr17 22695389 22695858 -62742622 - MLT1C LTR MaLR 0 467 2 785 275 73 29 chr17 22695860 22696133 -62742347 - HERV16 LTR ERVL -4053 943 659 2049 198 37 28 chr17 22696133 22696584 -62741896 - L1PA15-16 LINE L1 -3805 2577 2132 1794 170 0 13 chr17 22696584 22696890 -62741590 - AluJo SINE Alu -10 302 1 2049 198 37 28 chr17 22696890 22697081 -62741399 - L1PA15-16 LINE L1 -4250 2132 1944 2061 134 0 3 chr17 22697081 22697388 -62741092 - AluSx SINE Alu -6 306 1 2049 198 37 28 chr17 22697388 22697599 -62740881 - L1PA15-16 LINE L1 -4438 1944 1646 2039 182 96 15 chr17 22697636 22698031 -62740449 - L1M4 LINE L1 -5656 886 460 1097 184 19 10 chr17 22698030 22698237 -62740243 - L1M4 LINE L1 -6331 211 3 * 964 295 7 18 chr17 22698237 22698515 -62739965 - HERV16 LTR ERVL -4335 661 387 278 232 14 14 chr17 22698515 22698584 -62739896 + HERV16 LTR ERVL 171 239 -4757 929 126 14 34 chr17 22698592 22698799 -62739681 + L1MA7 LINE L1 6087 6289 -2 463 247 52 17 chr17 22699124 22699298 -62739182 + L1M4 LINE L1 2316 2495 -3651 228 111 0 0 chr17 22699340 22699376 -62739104 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 739 236 7 0 chr17 22699378 22699522 -62738958 - FRAM SINE Alu -31 145 1 656 280 40 24 chr17 22699529 22699858 -62738622 + L1M4 LINE L1 2539 2872 -3274 1353 107 51 5 chr17 22699865 22700257 -62738223 - L1PA16 LINE L1 -9 6157 5708 * 1560 255 18 4 chr17 22700256 22700391 -62738089 + L1M4 LINE L1 2913 3045 -3101 2274 66 3 0 chr17 22700391 22700679 -62737801 + AluY SINE Alu 1 289 -22 1560 255 18 4 chr17 22700679 22701053 -62737427 + L1M4 LINE L1 3045 3429 -2717 818 173 0 0 chr17 22701059 22701192 -62737288 + FLAM_C SINE Alu 1 133 -10 856 282 23 80 chr17 22701193 22701717 -62736763 + L1M4 LINE L1 3432 3925 -2221 1712 162 0 0 chr17 22701728 22702036 -62736444 - AluSg SINE Alu -2 308 1 6169 101 13 4 chr17 22702255 22703686 -62734794 - L1PA16 LINE L1 -11 6155 4716 222 37 0 0 chr17 22703853 22703880 -62734600 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 381 258 118 0 chr17 22703880 22703973 -62734507 - L2 LINE L2 -16 3297 3194 201 349 128 20 chr17 22703948 22704097 -62734383 + L2 LINE L2 3101 3265 -7 * 2725 109 33 19 chr17 22704310 22704732 -62733748 - MSTA LTR MaLR 0 428 1 622 307 68 0 chr17 22704985 22705177 -62733303 + MIR SINE MIR 20 224 -38 701 180 35 23 chr17 22705177 22705349 -62733131 + L1MA8 LINE L1 5931 6104 -187 469 179 13 0 chr17 22705433 22705511 -62732969 - Tigger5 DNA MER2_type -2244 79 1 656 229 66 0 chr17 22705518 22705684 -62732796 + L1MA8 LINE L1 6112 6288 -3 2335 143 121 5 chr17 22705696 22706116 -62732364 - MER31A LTR ERV1 -16 469 1 829 161 161 0 chr17 22706116 22706277 -62732203 + MER5A DNA MER1_type 3 189 0 561 192 8 46 chr17 22706375 22706505 -62731975 + MER5B DNA MER1_type 18 142 -36 886 183 39 0 chr17 22706505 22706685 -62731795 - MER5A DNA MER1_type -2 187 1 768 143 30 23 chr17 22707173 22707306 -62731174 - FLAM_C SINE Alu -1 142 9 469 188 119 10 chr17 22707383 22707484 -62730996 + L2 LINE L2 3196 3307 -6 262 327 29 0 chr17 22707668 22707772 -62730708 - L2 LINE L2 -214 3058 2952 357 253 13 0 chr17 22708200 22708279 -62730201 - MIR SINE MIR -70 192 113 493 155 54 70 chr17 22708716 22708845 -62729635 + MIR3 SINE MIR 61 187 -21 2206 115 0 3 chr17 22708999 22709311 -62729169 - AluSx SINE Alu -1 311 1 1506 133 25 4 chr17 22709923 22710164 -62728316 + AluJb SINE Alu 34 279 -33 301 231 123 0 chr17 22710508 22710573 -62727907 + L2 LINE L2 3193 3265 -7 300 263 95 11 chr17 22710583 22710678 -62727802 - MIR SINE MIR -79 183 81 312 306 0 0 chr17 22710844 22711017 -62727463 + (TG)n Simple_repeat Simple_repeat 2 174 0 211 225 0 0 chr17 22711019 22711059 -62727421 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 578 246 3 0 chr17 22711066 22711400 -62727080 + (TG)n Simple_repeat Simple_repeat 1 335 0 1655 192 24 87 chr17 22711683 22712106 -62726374 + MLT2C2 LTR ERVL 1 391 -73 1969 121 0 0 chr17 22712106 22712419 -62726061 - AluSx SINE Alu 0 315 3 1655 192 24 87 chr17 22712419 22712488 -62725992 + MLT2C2 LTR ERVL 391 463 -1 1534 230 16 29 chr17 22712879 22713258 -62725222 - MLT1A2 LTR MaLR 0 374 1 1173 117 99 33 chr17 22713700 22713758 -62724722 - L1MC2 LINE L1 -340 6004 5951 2111 115 0 3 chr17 22713758 22714063 -62724417 - AluSq SINE Alu -9 304 1 1173 117 99 33 chr17 22714063 22714217 -62724263 - L1MC2 LINE L1 -393 5951 5778 420 146 0 104 chr17 22714526 22714583 -62723897 + MER94 DNA DNA 26 72 -62 1999 131 0 0 chr17 22714583 22714899 -62723581 + AluSx SINE Alu 1 316 0 420 146 0 104 chr17 22714899 22714936 -62723544 + MER94 DNA DNA 72 111 -23 423 221 32 11 chr17 22715163 22715258 -62723222 - MLT1J1 LTR MaLR -108 338 242 * 424 216 23 0 chr17 22715252 22715340 -62723140 + MER81 DNA DNA 22 111 -3 814 251 62 41 chr17 22715343 22715586 -62722894 - MLT1J1 LTR MaLR -192 254 7 1728 193 134 43 chr17 22716569 22717009 -62721471 - MLT1D LTR MaLR 0 505 26 517 272 95 0 chr17 22717186 22717344 -62721136 - MIR SINE MIR -70 192 20 786 170 14 20 chr17 22717943 22718090 -62720390 - AluJb SINE Alu -165 147 2 198 0 0 0 chr17 22718151 22718173 -62720307 + (T)n Simple_repeat Simple_repeat 1 22 0 459 253 117 19 chr17 22718401 22718555 -62719925 - MLT1J2 LTR MaLR -22 428 260 403 189 0 0 chr17 22718618 22718708 -62719772 - AluSc SINE Alu -1 308 219 393 315 0 9 chr17 22718729 22718840 -62719640 - MLT1I LTR MaLR -270 139 30 2454 193 27 17 chr17 22718844 22719287 -62719193 + MER82 DNA MER2_type 1 451 -202 5354 149 38 1 chr17 22719287 22720154 -62718326 - MER54A LTR ERVL 0 901 3 2454 193 27 17 chr17 22720154 22720193 -62718287 + MER82 DNA MER2_type 451 488 -165 1089 135 79 0 chr17 22720194 22720372 -62718108 - LTR47A LTR ERVL 0 452 261 756 262 24 0 chr17 22720592 22720756 -62717724 + MER82 DNA MER2_type 485 652 -1 1755 211 89 77 chr17 22720763 22721345 -62717135 - MLT1G1 LTR MaLR -6 589 1 1102 243 94 45 chr17 22721562 22722010 -62716470 + MLT1H LTR MaLR 58 527 -22 1840 152 0 29 chr17 22722283 22722598 -62715882 - AluJo SINE Alu -6 306 1 1957 115 3 16 chr17 22723195 22723500 -62714980 - AluSq SINE Alu -12 301 1 252 196 0 20 chr17 22723516 22723567 -62714913 - MLT1I LTR MaLR 0 409 360 757 209 0 50 chr17 22723693 22723875 -62714605 - MLT1J1 LTR MaLR -253 193 21 1394 235 66 47 chr17 22724658 22725083 -62713397 + MLT2F LTR ERVL 1 433 -230 578 143 0 41 chr17 22725117 22725215 -62713265 + FRAM SINE Alu 68 161 -15 2193 185 26 11 chr17 22725243 22725621 -62712859 + MLT1F1 LTR MaLR 179 562 -5 621 261 39 0 chr17 22725629 22725809 -62712671 + MLT2F LTR ERVL 476 662 -1 296 129 113 32 chr17 22725866 22725928 -62712552 - MER5B DNA MER1_type 0 178 112 2344 81 0 0 chr17 22725929 22726236 -62712244 + AluY SINE Alu 1 307 -4 245 98 24 0 chr17 22726236 22726277 -62712203 + (GA)n Simple_repeat Simple_repeat 1 42 0 649 211 16 0 chr17 22726278 22726406 -62712074 - MER5B DNA MER1_type -48 130 1 194 319 0 0 chr17 22726713 22726760 -62711720 + L3 LINE CR1 1521 1567 -10 * 338 290 46 23 chr17 22726751 22726882 -62711598 + MIR3 SINE MIR 44 177 -31 1355 262 55 8 chr17 22726901 22727283 -62711197 - LTR16A LTR ERVL -21 429 30 2122 158 7 9 chr17 22727293 22727645 -62710835 - MLT1A1 LTR MaLR -11 446 1 2065 109 17 3 chr17 22728538 22728831 -62709649 + AluSx SINE Alu 1 297 -15 190 294 153 0 chr17 22729127 22729212 -62709268 - L2 LINE L2 -31 3241 3144 2228 160 11 6 chr17 22729220 22729583 -62708897 - MLT1A1 LTR MaLR 0 365 1 256 248 15 98 chr17 22731305 22731438 -62707042 - MIR SINE MIR -51 211 90 1744 214 98 37 chr17 22731448 22731930 -62706550 - MLT1J LTR MaLR 0 511 1 917 100 31 8 chr17 22731998 22732128 -62706352 - FLAM_C SINE Alu 0 133 1 2096 71 0 0 chr17 22732195 22732464 -62706016 - AluY SINE Alu -1 310 42 538 333 101 43 chr17 22732494 22732869 -62705611 - L3 LINE CR1 -1 1576 1180 237 222 0 0 chr17 22733216 22733261 -62705219 - MLT1J LTR MaLR -1 510 466 576 230 42 118 chr17 22733276 22733452 -62705028 - MLT1J LTR MaLR -119 496 308 2090 129 0 0 chr17 22733452 22733755 -62704725 - AluSx SINE Alu -8 304 2 576 230 42 118 chr17 22733755 22733887 -62704593 - MLT1J LTR MaLR -307 308 111 246 320 51 0 chr17 22733972 22734050 -62704430 + MIR3 SINE MIR 115 196 -12 2198 98 3 0 chr17 22734098 22734405 -62704075 + AluSq SINE Alu 1 308 -5 672 253 53 16 chr17 22734433 22734623 -62703857 + MIR SINE MIR 46 242 -20 1009 166 0 11 chr17 22735390 22735565 -62702915 + MLT1B LTR MaLR 1 173 -217 1258 141 0 0 chr17 22735565 22735756 -62702724 + AluJo SINE Alu 1 191 -121 236 77 26 0 chr17 22735777 22735816 -62702664 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1311 175 5 0 chr17 22735818 22736041 -62702439 + MLT1B LTR MaLR 167 390 0 3396 153 83 3 chr17 22736226 22736802 -62701678 + LTR26E LTR ERV1 1 622 0 1616 196 58 13 chr17 22736809 22737202 -62701278 - MER69 DNA AcHobo -27 2499 2089 * 2372 223 131 30 chr17 22737201 22737340 -62701140 - MER69 DNA AcHobo -1288 1238 1114 234 0 0 0 chr17 22737340 22737366 -62701114 + (TG)n Simple_repeat Simple_repeat 1 26 0 2372 223 131 30 chr17 22737366 22737926 -62700554 - MER69 DNA AcHobo -1412 1114 468 1098 228 123 9 chr17 22737928 22738426 -62700054 + MLT1G1 LTR MaLR 3 586 -9 534 262 49 43 chr17 22738435 22738599 -62699881 - MER69 DNA AcHobo -2054 472 308 1815 238 65 26 chr17 22738739 22739273 -62699207 - MLT1H1 LTR MaLR 0 555 1 1171 250 73 18 chr17 22739656 22739984 -62698496 - LTR16C LTR ERVL 0 491 146 392 320 129 6 chr17 22740620 22740798 -62697682 + MIR3 SINE MIR 9 208 0 554 128 13 0 chr17 22740940 22741018 -62697462 - Tigger7 DNA MER2_type -3 2484 2406 2356 173 41 3 chr17 22741038 22741425 -62697055 - Tigger7 DNA MER2_type -2085 402 1 287 185 0 0 chr17 22741804 22741829 -62696651 - MSTA LTR MaLR 0 428 404 2726 80 11 0 chr17 22741829 22742178 -62696302 - THE1A LTR MaLR -2 353 1 287 185 0 0 chr17 22742178 22742206 -62696274 - MSTA LTR MaLR -23 405 375 2324 124 59 8 chr17 22742234 22742605 -62695875 - MSTA LTR MaLR -38 390 1 419 270 217 17 chr17 22742716 22742946 -62695534 - MLT1L LTR MaLR -10 605 330 267 231 106 39 chr17 22743107 22743211 -62695269 - MLT1L LTR MaLR -356 259 149 200 296 0 0 chr17 22744200 22744254 -62694226 + GA-rich Low_complexity Low_complexity 2 55 0 2690 251 45 21 chr17 22744274 22745050 -62693430 + L1ME3A LINE L1 5371 6165 -5 501 155 62 21 chr17 22745261 22745358 -62693122 - MER69 DNA AcHobo -1125 101 1 531 220 47 33 chr17 22745358 22745508 -62692972 - MIR SINE MIR -5 257 106 1463 128 90 45 chr17 22745663 22745952 -62692528 - AluJo SINE Alu -10 302 1 215 309 0 0 chr17 22746303 22746358 -62692122 - L2 LINE L2 -10 3262 3208 423 297 100 17 chr17 22746446 22746646 -62691834 - MIR SINE MIR -37 225 15 1702 227 58 13 chr17 22746923 22747386 -62691094 - L1M4 LINE L1 -1721 4425 3942 547 218 44 92 chr17 22747841 22747922 -62690558 - L1MC4 LINE L1 -2 8040 7957 1153 198 40 125 chr17 22747922 22748321 -62690159 + MLT1A1 LTR MaLR 1 365 0 547 218 44 92 chr17 22748321 22748382 -62690098 - L1MC4 LINE L1 -85 7957 7895 387 165 13 0 chr17 22748382 22748461 -62690019 - MER116 DNA Mariner 0 80 1 547 218 44 92 chr17 22748461 22748610 -62689870 - L1MC4 LINE L1 -147 7895 7762 3156 179 7 11 chr17 22748620 22749157 -62689323 + MLT1F LTR MaLR 1 535 -7 597 222 9 0 chr17 22749408 22749516 -62688964 - MIR SINE MIR -153 109 1 580 218 123 74 chr17 22749964 22750032 -62688448 + LTR16C LTR ERVL 3 66 -425 1347 123 15 0 chr17 22750032 22750236 -62688244 + MER3 DNA MER1_type 3 209 0 580 218 123 74 chr17 22750236 22750600 -62687880 + LTR16C LTR ERVL 66 491 0 1541 185 3 23 chr17 22751258 22751566 -62686914 - AluJb SINE Alu -5 307 6 255 350 48 19 chr17 22752406 22752509 -62685971 - MIR SINE MIR -61 147 42 1584 198 91 39 chr17 22752640 22753049 -62685431 - LTR16C LTR ERVL 0 491 62 585 342 119 32 chr17 22753840 22754211 -62684269 - L2 LINE L2 -6 3266 2864 690 147 92 65 chr17 22754572 22754658 -62683822 + MER53 DNA DNA 1 83 -106 2101 102 7 0 chr17 22754658 22754953 -62683527 + AluSx SINE Alu 1 297 -15 690 147 92 65 chr17 22754953 22755050 -62683430 + MER53 DNA DNA 83 189 0 294 315 0 0 chr17 22755055 22755144 -62683336 + MLT1K LTR MaLR 144 232 -356 232 232 37 37 chr17 22755331 22755413 -62683067 + MLT1K LTR MaLR 468 549 -39 554 103 0 35 chr17 22755762 22755849 -62682631 - AluJo SINE Alu -8 304 221 1172 176 0 9 chr17 22755950 22756166 -62682314 - AluJo SINE Alu -98 214 1 312 206 11 98 chr17 22756321 22756413 -62682067 - MIR3 SINE MIR -17 191 108 441 289 177 10 chr17 22757437 22757658 -62680822 - MIR SINE MIR -6 256 3 1710 269 92 12 chr17 22757802 22758304 -62680176 - MLT1H1 LTR MaLR -2 553 12 1753 172 0 3 chr17 22758526 22758823 -62679657 - AluJo SINE Alu -16 296 1 1051 233 85 89 chr17 22759482 22759988 -62678492 - MLT1H1 LTR MaLR -11 544 41 1293 188 31 27 chr17 22760135 22760391 -62678089 - MIR SINE MIR 0 262 6 250 320 20 30 chr17 22760410 22760467 -62678013 - L2 LINE L2 -33 3239 3182 1383 255 45 55 chr17 22760467 22760981 -62677499 + MLT1J LTR MaLR 1 509 -2 250 320 20 30 chr17 22760981 22761023 -62677457 - L2 LINE L2 -90 3182 3141 5248 162 19 3 chr17 22762471 22763838 -62674642 - L1MB5 LINE L1 -8 6166 4778 5994 127 26 40 chr17 22763849 22764011 -62674469 - L1MC1 LINE L1 -88 6245 6082 902 133 0 22 chr17 22764011 22764146 -62674334 - FLAM_C SINE Alu 0 133 2 5994 127 26 40 chr17 22764146 22765053 -62673427 - L1MC1 LINE L1 -251 6082 5185 482 237 0 0 chr17 22765043 22765140 -62673340 - L1MC1 LINE L1 -1771 4375 4279 * 1957 120 0 33 chr17 22765201 22765502 -62672978 + AluSx SINE Alu 5 295 -17 570 243 269 36 chr17 22765502 22765807 -62672673 - MLT1K LTR MaLR -50 538 163 204 125 0 0 chr17 22765949 22765981 -62672499 + L2 LINE L2 3282 3313 0 2261 69 7 0 chr17 22766146 22766435 -62672045 - AluY SINE Alu -20 291 1 1740 224 89 14 chr17 22766944 22767315 -62671165 + MLT1G1 LTR MaLR 1 399 -196 296 164 180 0 chr17 22767327 22767388 -62671092 + MLT1F LTR MaLR 3 74 -468 259 282 129 0 chr17 22767554 22767639 -62670841 + MLT1F1 LTR MaLR 71 166 -401 1355 192 143 54 chr17 22767718 22768067 -62670413 + MLT1F1 LTR MaLR 188 567 0 650 253 13 26 chr17 22768082 22768236 -62670244 + MLT1G1 LTR MaLR 438 589 -6 1944 144 0 26 chr17 22768260 22768572 -62669908 + AluSx SINE Alu 1 304 -8 1425 157 5 0 chr17 22768647 22768870 -62669610 - MLT1B LTR MaLR 0 390 167 2114 80 0 0 chr17 22768895 22769159 -62669321 + THE1A LTR MaLR 1 264 -91 212 288 144 27 chr17 22770150 22770261 -62668219 + MIR SINE MIR 23 146 -62 332 264 91 77 chr17 22770313 22770359 -62668121 - MLT1L LTR MaLR -56 559 515 2011 128 0 25 chr17 22770359 22770678 -62667802 + AluJo SINE Alu 1 311 -1 332 264 91 77 chr17 22770678 22771032 -62667448 - MLT1L LTR MaLR -100 515 120 936 108 0 0 chr17 22771047 22771205 -62667275 + AluSg/x SINE Alu 153 310 0 180 309 12 48 chr17 22771938 22772022 -62666458 - MIR SINE MIR -77 185 105 724 209 7 0 chr17 22772547 22772700 -62665780 - MER74A LTR ERVL -124 434 281 407 277 173 14 chr17 22772884 22773104 -62665376 + LTR16A LTR ERVL 12 266 -184 2442 179 18 7 chr17 22773104 22773557 -62664923 - LTR32 LTR ERVL 0 471 14 477 256 158 6 chr17 22773575 22773739 -62664741 + LTR16A LTR ERVL 262 450 0 1926 182 81 74 chr17 22774903 22775439 -62663041 - MER74A LTR ERVL 0 558 16 1818 97 0 0 chr17 22775439 22775667 -62662813 + AluSg/x SINE Alu 77 304 -6 1926 182 81 74 chr17 22775667 22775684 -62662796 - MER74A LTR ERVL -542 16 1 408 247 60 23 chr17 22775764 22776005 -62662475 + L1MC4a LINE L1 5695 5821 -357 438 258 38 16 chr17 22776178 22776364 -62662116 - LTR16B LTR ERVL -144 320 131 223 313 179 0 chr17 22777016 22777128 -62661352 - L2 LINE L2 -216 3056 2925 2507 90 0 0 chr17 22777129 22777439 -62661041 + AluSq SINE Alu 1 310 -3 356 264 72 45 chr17 22777624 22777834 -62660646 - MLT1K LTR MaLR -229 386 183 360 250 190 67 chr17 22778656 22778904 -62659576 + MER5C DNA MER1_type 5 294 -30 207 0 0 0 chr17 22778904 22778927 -62659553 + (TA)n Simple_repeat Simple_repeat 1 23 0 360 250 190 67 chr17 22778927 22778962 -62659518 + MER5C DNA MER1_type 294 323 -1 361 298 57 117 chr17 22779062 22779431 -62659049 + L2 LINE L2 2918 3264 -8 2149 137 7 0 chr17 22779468 22779767 -62658713 + AluJb SINE Alu 1 301 -11 2056 109 43 31 chr17 22779772 22780121 -62658359 - L1MB3 LINE L1 -19 6164 5812 431 242 129 62 chr17 22780417 22780614 -62657866 + MIR SINE MIR 1 214 -48 1323 170 21 118 chr17 22780819 22781149 -62657331 + AluY SINE Alu 1 298 -13 658 249 55 67 chr17 22781379 22781797 -62656683 + LTR33 LTR ERVL 8 420 -101 288 208 13 13 chr17 22782393 22782470 -62656010 + MLT1K LTR MaLR 183 259 -329 203 278 0 0 chr17 22782534 22782588 -62655892 - L2 LINE L2 -34 3279 3226 664 241 37 7 chr17 22784155 22784499 -62653981 - MLT1J2 LTR MaLR 0 450 61 1509 165 0 21 chr17 22784641 22784884 -62653596 + AluJb SINE Alu 1 238 -74 1120 142 6 11 chr17 22784906 22785089 -62653391 + MLT1C LTR MaLR 283 464 -3 481 292 72 74 chr17 22785132 22785330 -62653150 - HAL1 LINE L1 -273 2234 2037 2004 120 39 11 chr17 22785330 22785613 -62652867 - AluSx SINE Alu -21 291 1 481 292 72 74 chr17 22785613 22785928 -62652552 - HAL1 LINE L1 -470 2037 1722 249 192 39 44 chr17 22785929 22786007 -62652473 - MLT1F1 LTR MaLR -2 585 496 1001 235 77 81 chr17 22786018 22786562 -62651918 - HAL1 LINE L1 -1965 542 1 11302 82 7 5 chr17 22787343 22788876 -62649604 + THE1A-int LTR MaLR 45 1580 0 2391 73 117 0 chr17 22788878 22789194 -62649286 + THE1A LTR MaLR 3 355 0 518 237 0 0 chr17 22789194 22789287 -62649193 - FLAM_A SINE Alu -49 93 1 785 208 22 17 chr17 22789287 22789465 -62649015 - MLT1B LTR MaLR -211 179 1 1008 207 0 0 chr17 22789533 22789702 -62648778 + FAM SINE Alu 2 170 -5 201 269 58 19 chr17 22790503 22790555 -62647925 - L2 LINE L2 -9 3304 3251 2239 117 7 0 chr17 22790847 22791146 -62647334 - AluSx SINE Alu -11 301 1 2276 108 0 0 chr17 22792593 22792889 -62645591 - AluJb SINE Alu -16 296 1 348 272 78 0 chr17 22793033 22793136 -62645344 - MIR SINE MIR -8 254 144 1469 186 35 22 chr17 22793140 22793592 -62644888 + MLT2B1 LTR ERVL 5 501 -19 282 96 0 137 chr17 22793604 22793677 -62644803 + MLT2B3 LTR ERVL 458 554 0 9844 181 33 12 chr17 22793678 22795342 -62643138 + ERVL-B3 LTR ERVL 2 1708 -4056 3900 74 10 10 chr17 22795342 22795855 -62642625 - LTR10D LTR ERV1 0 513 1 9844 181 33 12 chr17 22795855 22796032 -62642448 + ERVL-B3 LTR ERVL 1708 1880 -3884 243 109 43 22 chr17 22796032 22796078 -62642402 + MLT2B1 LTR ERVL 474 520 0 284 189 311 19 chr17 22796078 22796184 -62642296 - MIR SINE MIR -114 148 12 301 290 203 14 chr17 22796435 22796573 -62641907 + MIR3 SINE MIR 36 199 -9 1217 125 111 0 chr17 22796679 22796895 -62641585 - MSTB1 LTR MaLR -1 431 192 1092 126 0 0 chr17 22796896 22797093 -62641387 - AluSq SINE Alu 0 336 140 310 50 0 0 chr17 22797093 22797133 -62641347 - MSTB1 LTR MaLR -386 40 1 402 287 116 0 chr17 22797161 22797325 -62641155 + MIR SINE MIR 52 234 -28 221 368 0 43 chr17 22797730 22797915 -62640565 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 1018 194 0 0 chr17 22797996 22798166 -62640314 + FRAM SINE Alu 1 170 -6 3332 200 46 47 chr17 22798379 22799167 -62639313 + L1MD2 LINE L1 4505 5292 -1067 2267 107 13 7 chr17 22799167 22799475 -62639005 + AluSg SINE Alu 1 310 0 3332 200 46 47 chr17 22799475 22800304 -62638176 + L1MD2 LINE L1 5292 6141 -218 240 35 0 0 chr17 22800364 22800393 -62638087 + (CA)n Simple_repeat Simple_repeat 1 29 0 494 272 122 9 chr17 22801023 22801236 -62637244 + L1ME4a LINE L1 5789 6025 -96 593 221 74 42 chr17 22802568 22802758 -62635722 - MLT1H1 LTR MaLR -350 205 10 400 277 36 0 chr17 22803206 22803318 -62635162 + MIR3 SINE MIR 87 202 -6 1454 236 102 63 chr17 22803977 22804544 -62633936 + MLT1G1 LTR MaLR 2 590 -5 517 294 27 38 chr17 22804576 22804760 -62633720 + MER5A DNA MER1_type 8 189 0 753 237 56 103 chr17 22804956 22805365 -62633115 + MLT1J LTR MaLR 122 511 0 406 284 153 27 chr17 22805775 22805958 -62632522 - MIR SINE MIR -29 233 28 1151 309 18 15 chr17 22806991 22807382 -62631098 + MLT1I LTR MaLR 1 392 -17 1422 116 50 12 chr17 22807603 22807862 -62630618 - L1MA4 LINE L1 -7 6293 6025 2371 130 0 12 chr17 22807864 22808202 -62630278 + MER1B DNA MER1_type 4 337 0 1990 140 0 0 chr17 22809221 22809500 -62628980 - AluJo SINE Alu -28 284 6 582 255 62 6 chr17 22809658 22809819 -62628661 - MIR SINE MIR -41 221 52 572 257 81 88 chr17 22809916 22810108 -62628372 + L2 LINE L2 2555 2747 -525 2140 118 7 23 chr17 22810108 22810413 -62628067 - AluSx SINE Alu -12 300 1 572 257 81 88 chr17 22810413 22810688 -62627792 + L2 LINE L2 2747 3019 -253 301 70 0 0 chr17 22810758 22810801 -62627679 - MADE1 DNA Mariner -37 43 1 2255 116 0 10 chr17 22811185 22811495 -62626985 - AluSx SINE Alu -5 307 1 249 209 0 0 chr17 22811664 22811707 -62626773 - L2 LINE L2 -17 3255 3213 1656 177 115 100 chr17 22811726 22811976 -62626504 - MLT1F1 LTR MaLR -2 565 320 2683 125 29 10 chr17 22811976 22812392 -62626088 - MSTB LTR MaLR -2 424 1 1656 177 115 100 chr17 22812392 22812673 -62625807 - MLT1F1 LTR MaLR -247 320 1 222 309 111 0 chr17 22812681 22812762 -62625718 - MIR SINE MIR -70 192 103 2451 140 12 31 chr17 22812762 22813125 -62625355 + MLT2C2 LTR ERVL 1 357 -107 2028 141 0 45 chr17 22813125 22813437 -62625043 + AluSx SINE Alu 1 298 -14 2451 140 12 31 chr17 22813437 22813486 -62624994 + MLT2C2 LTR ERVL 357 405 -59 246 62 0 0 chr17 22813490 22813522 -62624958 + (TCTA)n Simple_repeat Simple_repeat 3 34 0 1275 241 100 39 chr17 22813525 22814036 -62624444 + MER34 LTR ERV1 1 542 0 210 37 0 0 chr17 22814040 22814067 -62624413 + (CA)n Simple_repeat Simple_repeat 2 28 0 284 119 0 0 chr17 22814068 22814110 -62624370 + MLT2C2 LTR ERVL 356 397 0 196 261 22 0 chr17 22814112 22814158 -62624322 - MIR SINE MIR -157 105 59 1572 233 128 41 chr17 22814218 22814751 -62623729 + MLT1G1 LTR MaLR 1 579 -16 447 321 172 17 chr17 22814752 22814820 -62623660 - L2 LINE L2 -43 3270 3214 1952 174 49 3 chr17 22814820 22815165 -62623315 - MLT1A1 LTR MaLR -4 361 1 447 321 172 17 chr17 22815165 22815392 -62623088 - L2 LINE L2 -99 3214 2929 1580 149 54 0 chr17 22815516 22815757 -62622723 - AluJb SINE Alu -15 297 44 1700 179 0 43 chr17 22815757 22816080 -62622400 - AluJb SINE Alu -2 310 1 1607 217 32 11 chr17 22816972 22817345 -62621135 + L1ME3 LINE L1 5754 6134 -28 501 250 68 8 chr17 22817345 22817477 -62621003 + FLAM_A SINE Alu 2 141 -1 1626 204 6 12 chr17 22817685 22818013 -62620467 - MLT1A1 LTR MaLR 0 365 40 197 184 0 0 chr17 22918464 22918502 -62519978 + MIR SINE MIR 80 117 -145 522 233 136 17 chr17 22919191 22919367 -62519113 - MIR SINE MIR -26 236 40 263 312 11 11 chr17 22920175 22920268 -62518212 + (CGTG)n Simple_repeat Simple_repeat 2 94 0 381 93 0 0 chr17 22920285 22920339 -62518141 + (TG)n Simple_repeat Simple_repeat 1 54 0 201 39 0 0 chr17 22920450 22920476 -62518004 + (CGCGG)n Simple_repeat Simple_repeat 1 26 0 457 219 126 0 chr17 22920677 22920796 -62517684 + MIR3 SINE MIR 45 178 -30 192 333 11 33 chr17 22920961 22921051 -62517429 - MIR SINE MIR -126 136 49 303 284 53 0 chr17 22921119 22921214 -62517266 - MIR SINE MIR -78 184 85 203 321 62 0 chr17 22921427 22921508 -62516972 - MIR SINE MIR -93 169 84 181 255 0 20 chr17 22921979 22922030 -62516450 + MIR SINE MIR 99 148 -60 265 203 38 38 chr17 22922766 22922845 -62515635 + MIR SINE MIR 54 132 -76 194 311 104 47 chr17 22923078 22923184 -62515296 + MIR SINE MIR 6 117 -145 587 242 30 0 chr17 22923450 22923582 -62514898 + MIR SINE MIR 32 167 -95 585 294 82 5 chr17 22923852 22924036 -62514444 - MIR SINE MIR -1 261 64 254 250 91 11 chr17 22924474 22924562 -62513918 - MIR3 SINE MIR -52 156 62 347 324 94 0 chr17 22925034 22925204 -62513276 + LTR16C LTR ERVL 37 222 -269 530 208 113 0 chr17 22925236 22925395 -62513085 + LTR16C LTR ERVL 281 457 -34 232 157 0 48 chr17 22925484 22925567 -62512913 + CT-rich Low_complexity Low_complexity 1 79 0 255 347 0 10 chr17 22925774 22925872 -62512608 + (TGGA)n Simple_repeat Simple_repeat 2 98 0 333 230 19 14 chr17 22925885 22926104 -62512376 + (TGGA)n Simple_repeat Simple_repeat 1 220 0 456 313 23 0 chr17 22926510 22926638 -62511842 - MIR SINE MIR 0 262 132 854 177 9 0 chr17 22926756 22926998 -62511482 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 204 238 0 0 chr17 22927552 22927594 -62510886 - MIR SINE MIR 0 262 221 1750 144 10 0 chr17 22927613 22927918 -62510562 - Tigger3(Golem) DNA MER2_type -1 3028 2721 261 289 53 0 chr17 22927916 22927992 -62510488 - Tigger3(Golem) DNA MER2_type -2947 82 3 * 229 196 161 0 chr17 22927997 22928053 -62510427 - MIR SINE MIR -91 171 107 253 172 35 0 chr17 22928857 22928914 -62509566 + MIR SINE MIR 98 155 -62 242 240 192 34 chr17 22930288 22930434 -62508046 - L2 LINE L2 -913 2401 2233 186 43 0 0 chr17 22930503 22930526 -62507954 + (GGA)n Simple_repeat Simple_repeat 1 23 0 204 302 70 31 chr17 22931149 22931278 -62507202 + L2 LINE L2 3174 3307 -6 194 328 15 0 chr17 22932349 22932416 -62506064 + MIR3 SINE MIR 88 155 -53 322 297 83 28 chr17 22932485 22932639 -62505841 - MIR3 SINE MIR -62 146 1 258 362 9 9 chr17 22932809 22932914 -62505566 + MIR SINE MIR 158 262 0 346 331 25 38 chr17 22933936 22934093 -62504387 - MIR SINE MIR -90 172 18 2292 44 4 0 chr17 22934103 22934378 -62504102 - AluY SINE Alu -1 310 35 1194 70 0 0 chr17 22934387 22934543 -62503937 - AluY SINE Alu 0 311 156 207 100 0 0 chr17 22934851 22934881 -62503599 + (TG)n Simple_repeat Simple_repeat 2 31 0 250 260 0 0 chr17 22934974 22935024 -62503456 - L2 LINE L2 -6 3307 3258 212 351 27 0 chr17 22935642 22935716 -62502764 - L2 LINE L2 0 3313 3238 186 314 0 0 chr17 22935733 22935784 -62502696 - MIR SINE MIR -112 150 100 766 279 105 3 chr17 22937601 22937934 -62500546 - MLT1K LTR MaLR -119 469 103 210 310 42 49 chr17 22939297 22939439 -62499041 - L2 LINE L2 -324 2989 2849 305 294 157 7 chr17 22940577 22940730 -62497750 - L2 LINE L2 -5 3267 3092 729 259 202 5 chr17 22940783 22941284 -62497196 + L2 LINE L2 2696 3311 -2 225 339 0 0 chr17 22941602 22941667 -62496813 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 688 200 12 0 chr17 22941669 22941834 -62496646 + (TGGA)n Simple_repeat Simple_repeat 3 169 0 739 178 11 0 chr17 22941855 22942029 -62496451 + (TGGA)n Simple_repeat Simple_repeat 3 178 0 764 195 8 0 chr17 22942045 22942301 -62496179 + (TGGA)n Simple_repeat Simple_repeat 1 258 0 209 210 16 0 chr17 22942313 22942375 -62496105 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 659 223 0 11 chr17 22942406 22942581 -62495899 + (TGGA)n Simple_repeat Simple_repeat 3 175 0 752 190 0 22 chr17 22942618 22942802 -62495678 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 283 280 0 0 chr17 22942814 22942889 -62495591 + (TGGA)n Simple_repeat Simple_repeat 1 75 0 462 301 58 22 chr17 22942908 22943147 -62495333 - MIR SINE MIR 0 262 13 570 260 82 82 chr17 22943587 22943918 -62494562 - L2 LINE L2 -171 3142 2812 203 219 0 0 chr17 22944828 22944869 -62493611 - L3 LINE CR1 -114 1463 1423 274 224 93 19 chr17 22945347 22945461 -62493019 + MIR SINE MIR 25 144 -64 566 348 97 13 chr17 22946235 22946626 -62491854 - Charlie4a DNA MER1_type -59 449 26 837 243 6 6 chr17 22946747 22946920 -62491560 - MIR SINE MIR -70 192 20 267 141 0 0 chr17 22948368 22948416 -62490064 + MIR SINE MIR 100 148 -60 390 294 24 35 chr17 22949093 22949263 -62489217 + Charlie4a DNA MER1_type 280 447 -61 228 339 131 0 chr17 22949418 22949548 -62488932 - L2 LINE L2 -1 3271 3125 355 311 0 10 chr17 22950118 22950221 -62488259 - MIR SINE MIR -64 144 43 229 149 64 0 chr17 22950296 22950343 -62488137 + L2 LINE L2 3006 3055 -217 280 290 149 0 chr17 22951019 22951126 -62487354 + MIR SINE MIR 112 234 -28 639 265 93 0 chr17 22951274 22951478 -62487002 - LTR16C LTR ERVL -14 477 255 321 26 0 0 chr17 22951871 22951909 -62486571 + (CA)n Simple_repeat Simple_repeat 2 39 0 533 292 13 5 chr17 22952717 22952902 -62485578 - MIR SINE MIR -57 205 20 468 191 145 33 chr17 22952904 22953056 -62485424 - MIR SINE MIR -73 189 21 199 240 40 0 chr17 22953470 22953520 -62484960 + MIR SINE MIR 109 160 -102 226 356 0 0 chr17 22953651 22953738 -62484742 + MIR SINE MIR 61 147 -115 598 217 132 0 chr17 22954184 22954336 -62484144 + MIR SINE MIR 65 236 -26 879 124 147 23 chr17 22954390 22954567 -62483913 - AluSg/x SINE Alu 0 310 112 479 195 8 0 chr17 22954577 22954695 -62483785 + (TCCA)n Simple_repeat Simple_repeat 3 121 0 224 313 16 0 chr17 22957290 22957354 -62481126 + (CAG)n Simple_repeat Simple_repeat 3 67 0 288 261 14 0 chr17 22958356 22958425 -62480055 + L2 LINE L2 3200 3269 -3 1158 267 99 15 chr17 22959593 22960085 -62478395 + L2 LINE L2 2776 3310 -3 308 262 75 19 chr17 22960138 22960245 -62478235 - MIR SINE MIR -99 163 51 197 247 135 34 chr17 22961974 22962063 -62476417 - L2 LINE L2 -60 3253 3156 2558 45 0 10 chr17 22962946 22963258 -62475222 - AluY SINE Alu -2 309 1 193 200 0 0 chr17 22964071 22964106 -62474374 + MIR SINE MIR 117 151 -111 767 215 80 16 chr17 22964253 22964504 -62473976 - MLT1C LTR MaLR 0 467 201 736 178 178 7 chr17 22964530 22964682 -62473798 - AluJo SINE Alu -18 294 117 2165 121 0 0 chr17 22964682 22964987 -62473493 - AluSc SINE Alu -2 307 3 225 125 42 21 chr17 22964988 22965036 -62473444 - MLT1C LTR MaLR -218 172 124 270 258 26 53 chr17 22966131 22966282 -62472198 + (TCTG)n Simple_repeat Simple_repeat 2 148 0 1083 316 83 16 chr17 22966528 22967104 -62471376 - L1ME1 LINE L1 -9 6157 5543 202 200 0 55 chr17 22967364 22967419 -62471061 + (CCCCAG)n Simple_repeat Simple_repeat 2 53 0 272 154 123 31 chr17 22967584 22967649 -62470831 - MIR SINE MIR -105 157 87 392 230 9 0 chr17 22968292 22968405 -62470075 + Charlie4 DNA MER1_type 1780 1893 -68 373 225 18 45 chr17 22968658 22968769 -62469711 - L2 LINE L2 -15 3298 3191 306 359 44 0 chr17 22968901 22969060 -62469420 + L2 LINE L2 2914 3079 -193 228 242 242 0 chr17 22969568 22969663 -62468817 - MIR SINE MIR -61 147 30 408 302 171 16 chr17 22969956 22970478 -62468002 - L2 LINE L2 -14 3258 2657 193 308 125 14 chr17 22970704 22970851 -62467629 + MIR3 SINE MIR 1 160 -63 392 325 43 27 chr17 22971148 22971336 -62467144 - MIR SINE MIR -25 237 47 312 27 0 0 chr17 22972949 22972986 -62465494 + (CA)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr17 22973204 22973224 -62465256 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 220 279 266 28 chr17 22977117 22977575 -62460905 + L2 LINE L2 2361 2927 -387 2054 112 0 6 chr17 22977677 22977989 -62460491 - MER9 LTR ERVK -201 310 1 237 328 123 8 chr17 22979772 22979894 -62458586 - MIR SINE MIR -60 202 67 2927 127 4 15 chr17 22980438 22980896 -62457584 - L1PA16 LINE L1 -9 6157 5705 191 319 52 52 chr17 22981134 22981250 -62457230 - L2 LINE L2 -15 3298 3183 996 222 36 64 chr17 22983284 22983548 -62454932 + MLT1E1 LTR MaLR 2 255 -399 1766 127 79 7 chr17 22983548 22983839 -62454641 + AluJb SINE Alu 1 312 0 996 222 36 64 chr17 22983839 22983934 -62454546 + MLT1E1 LTR MaLR 255 351 -303 222 345 138 0 chr17 22984196 22984283 -62454197 - MIR SINE MIR -8 254 156 181 338 62 0 chr17 22984271 22984351 -62454129 - MIR3 SINE MIR -12 196 112 * 21 36 0 0 chr17 22985618 22985646 -62452834 + AT_rich Low_complexity Low_complexity 1 28 0 327 274 0 62 chr17 22987969 22988148 -62450332 + C-rich Low_complexity Low_complexity 5 172 0 304 262 11 78 chr17 22988209 22988400 -62450080 + C-rich Low_complexity Low_complexity 1 178 0 280 207 0 24 chr17 22989267 22989349 -62449131 + (CGGGG)n Simple_repeat Simple_repeat 4 83 0 3620 57 4 2 chr17 22989439 22989896 -62448584 - L1PA6 LINE L1 -5 6149 5692 1035 155 39 6 chr17 22991174 22991355 -62447125 + AluJo SINE Alu 81 267 -45 373 175 25 33 chr17 22991357 22991477 -62447003 + GA-rich Low_complexity Low_complexity 2 120 0 307 216 68 11 chr17 22992021 22992133 -62446347 - L1MD3 LINE L1 0 8041 7897 904 324 56 12 chr17 22992480 22992980 -62445500 - MER90 LTR ERV1 -23 591 70 828 156 0 22 chr17 22994279 22994414 -62444066 + FLAM_C SINE Alu 2 133 0 26 30 0 0 chr17 22994468 22994501 -62443979 + AT_rich Low_complexity Low_complexity 1 33 0 1739 169 13 26 chr17 22994691 22995004 -62443476 - AluJo SINE Alu -2 310 2 305 341 116 57 chr17 22995118 22995505 -62442975 - L1M4 LINE L1 -1485 4661 4252 441 202 10 0 chr17 22998695 22998794 -62439686 - MER65C LTR ERV1 0 461 362 185 297 261 28 chr17 23001534 23002005 -62436475 + L2 LINE L2 2347 2927 -387 2105 134 0 0 chr17 23002215 23002513 -62435967 - AluSq SINE Alu 0 313 16 244 359 26 8 chr17 23003394 23003511 -62434969 - MIR SINE MIR -117 145 27 333 257 0 0 chr17 23003801 23003871 -62434609 - MIR SINE MIR -142 120 51 369 301 56 14 chr17 23004962 23005105 -62433375 - MIR3 SINE MIR -4 204 56 585 294 82 5 chr17 23005739 23005923 -62432557 - MIR SINE MIR -1 261 64 269 242 66 22 chr17 23006361 23006452 -62432028 - MIR3 SINE MIR -52 156 62 329 306 116 0 chr17 23006970 23007091 -62431389 + LTR16C LTR ERVL 88 222 -269 528 208 113 0 chr17 23007123 23007282 -62431198 + LTR16C LTR ERVL 281 457 -34 228 86 0 0 chr17 23007419 23007454 -62431026 + (TCC)n Simple_repeat Simple_repeat 1 35 0 344 239 17 17 chr17 23007744 23007992 -62430488 + (TGGA)n Simple_repeat Simple_repeat 1 248 0 456 320 23 0 chr17 23008398 23008526 -62429954 - MIR SINE MIR 0 262 132 844 166 6 12 chr17 23008649 23008994 -62429486 + (TGGA)n Simple_repeat Simple_repeat 1 343 0 778 191 5 5 chr17 23009006 23009228 -62429252 + (TGGA)n Simple_repeat Simple_repeat 1 222 0 579 209 11 6 chr17 23009242 23009419 -62429061 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 830 184 6 0 chr17 23009441 23009620 -62428860 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 457 219 126 0 chr17 23010061 23010180 -62428300 + MIR3 SINE MIR 45 178 -30 306 125 0 0 chr17 23010324 23010372 -62428108 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 282 295 53 0 chr17 23010520 23010615 -62427865 - MIR SINE MIR -78 184 85 182 371 52 9 chr17 23010853 23010969 -62427511 - MIR SINE MIR -66 142 22 287 193 26 97 chr17 23012131 23012245 -62426235 + MIR SINE MIR 27 132 -76 208 302 104 47 chr17 23012478 23012584 -62425896 + MIR SINE MIR 6 117 -145 697 264 24 0 chr17 23012850 23013017 -62425463 + MIR SINE MIR 32 202 -60 309 318 93 23 chr17 23013386 23013515 -62424965 + L1M4 LINE L1 5194 5331 -815 273 196 0 0 chr17 23014550 23014606 -62423874 + (CA)n Simple_repeat Simple_repeat 1 56 0 339 290 32 0 chr17 23014922 23015015 -62423465 + MIR SINE MIR 122 217 -45 489 313 218 2 chr17 23015413 23015812 -62422668 + L2 LINE L2 2829 3313 0 233 143 0 0 chr17 23016715 23016757 -62421723 - ORSL DNA AcHobo -20 255 214 897 198 5 0 chr17 23017067 23017513 -62420967 + (TGGA)n Simple_repeat Simple_repeat 1 448 0 234 128 0 0 chr17 23017551 23017590 -62420890 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 244 293 37 0 chr17 23017614 23017696 -62420784 + (TGGA)n Simple_repeat Simple_repeat 2 86 0 1343 56 0 0 chr17 23017753 23017947 -62420533 - AluY SINE Alu 0 314 121 287 224 53 0 chr17 23017951 23018027 -62420453 - ORSL DNA AcHobo -195 80 1 206 264 0 0 chr17 23018120 23018173 -62420307 + L2 LINE L2 2918 2970 -302 301 274 21 11 chr17 23018638 23018733 -62419747 + MIR SINE MIR 58 153 -109 261 0 0 0 chr17 23019190 23019219 -62419261 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 620 305 116 42 chr17 23019220 23019755 -62418725 - L2 LINE L2 -20 3293 2706 2213 111 3 0 chr17 23019767 23020073 -62418407 - AluSg SINE Alu -2 308 2 239 193 0 0 chr17 23020081 23020138 -62418342 - L1MB5 LINE L1 0 6174 6118 777 186 0 0 chr17 23020138 23020256 -62418224 + FLAM_C SINE Alu 1 118 -25 864 145 112 0 chr17 23020260 23020439 -62418041 - L1MB5 LINE L1 -31 6143 5945 539 206 92 0 chr17 23020460 23020591 -62417889 + L2 LINE L2 3171 3313 0 822 311 28 6 chr17 23020608 23020926 -62417554 - L1MB5 LINE L1 -237 5937 5613 190 327 77 0 chr17 23021662 23021766 -62416714 + MIR3 SINE MIR 82 193 -15 256 276 59 74 chr17 23022115 23022318 -62416162 + L2 LINE L2 2858 3057 -215 318 335 58 19 chr17 23022610 23022816 -62415664 + L1MC4a LINE L1 5734 5947 -1861 1685 152 0 37 chr17 23022820 23023142 -62415338 + AluJo SINE Alu 3 312 0 215 264 11 23 chr17 23023827 23023914 -62414566 + (TATG)n Simple_repeat Simple_repeat 4 89 0 268 284 4 8 chr17 23023915 23024177 -62414303 + (TG)n Simple_repeat Simple_repeat 1 261 0 180 426 0 0 chr17 23024701 23024769 -62413711 - L2 LINE L2 -91 3181 3114 395 276 118 8 chr17 23024794 23025124 -62413356 - LTR33A LTR ERVL -3 792 152 292 238 0 0 chr17 23025614 23025677 -62412803 - MIR SINE MIR -110 152 90 617 254 270 18 chr17 23026220 23026550 -62411930 + L2 LINE L2 2898 3310 -3 283 315 36 0 chr17 23026637 23026748 -62411732 + MIR SINE MIR 36 150 -58 232 323 125 0 chr17 23027445 23027541 -62410939 + MIR SINE MIR 29 136 -72 1533 240 83 36 chr17 23027738 23028227 -62410253 + L1MB5 LINE L1 5621 6138 -36 2381 85 0 0 chr17 23028227 23028534 -62409946 + AluSx SINE Alu 1 307 -5 1533 240 83 36 chr17 23028534 23028573 -62409907 + L1MB5 LINE L1 6138 6174 0 557 309 76 34 chr17 23029101 23029337 -62409143 + MIR SINE MIR 6 251 -11 446 275 0 0 chr17 23029569 23029736 -62408744 + (CA)n Simple_repeat Simple_repeat 1 167 0 455 325 26 0 chr17 23030361 23030515 -62407965 + MIR SINE MIR 27 184 -78 186 238 270 0 chr17 23030528 23030591 -62407889 + MIR SINE MIR 65 144 -118 506 315 21 0 chr17 23031063 23031206 -62407274 - MIR SINE MIR -22 240 95 457 280 217 6 chr17 23031347 23031522 -62406958 + MIR SINE MIR 39 250 -12 641 293 37 33 chr17 23031922 23032137 -62406343 + MIR SINE MIR 8 223 -39 514 261 114 23 chr17 23032195 23032371 -62406109 + MIR SINE MIR 37 228 -34 2164 108 3 0 chr17 23033100 23033396 -62405084 - AluSq SINE Alu -16 297 1 583 272 86 8 chr17 23033635 23033891 -62404589 + MLT1H LTR MaLR 15 328 -221 350 206 147 0 chr17 23033916 23034018 -62404462 + MLT1H LTR MaLR 433 549 0 2009 107 0 0 chr17 23034123 23034394 -62404086 + AluSc SINE Alu 1 271 -38 2315 74 0 7 chr17 23034439 23034735 -62403745 + AluSx SINE Alu 1 294 -18 257 261 52 43 chr17 23035077 23035192 -62403288 + L2 LINE L2 2889 3004 -268 228 338 60 26 chr17 23035266 23035417 -62403063 + L2 LINE L2 3028 3183 -89 255 317 139 34 chr17 23035675 23035883 -62402597 + MIR SINE MIR 33 262 0 689 201 45 13 chr17 23035913 23036067 -62402413 - MIR SINE MIR -81 181 23 459 0 0 0 chr17 23036835 23036886 -62401594 + (CA)n Simple_repeat Simple_repeat 1 51 0 550 276 96 62 chr17 23036918 23037018 -62401462 + MLT1L LTR MaLR 4 99 -516 777 274 41 0 chr17 23037018 23037215 -62401265 - MER3 DNA MER1_type 0 209 5 550 276 96 62 chr17 23037215 23037530 -62400950 + MLT1L LTR MaLR 99 433 -182 421 356 150 10 chr17 23037685 23037991 -62400489 + L2 LINE L2 2924 3272 0 2293 137 78 12 chr17 23038198 23038606 -62399874 + L1MB3 LINE L1 5747 6181 -2 2428 188 115 28 chr17 23038629 23039237 -62399243 + MER21B LTR ERV1 1 661 -202 4206 128 5 82 chr17 23039237 23040085 -62398395 - LTR39 LTR ERV1 0 783 2 760 139 191 6 chr17 23040087 23040260 -62398220 + MER21B LTR ERV1 659 863 0 2241 75 0 0 chr17 23040712 23041037 -62397443 + AluY SINE Alu 1 325 0 347 271 118 26 chr17 23041298 23041527 -62396953 + L1MC5 LINE L1 5530 5779 -342 2399 74 3 0 chr17 23041565 23041875 -62396605 + AluY SINE Alu 1 311 0 696 309 11 28 chr17 23041885 23042247 -62396233 + L1PB1 LINE L1 5479 5834 -317 * 1900 207 152 26 chr17 23041922 23042502 -62395978 + L1ME1 LINE L1 5509 6161 -5 2264 78 0 0 chr17 23042551 23042861 -62395619 + AluSq SINE Alu 1 310 0 419 294 38 16 chr17 23042907 23043091 -62395389 - MLT1J2 LTR MaLR 0 450 263 1929 138 37 0 chr17 23044234 23044531 -62393949 + AluJb SINE Alu 1 308 -4 253 282 0 42 chr17 23044593 23044664 -62393816 + polypurine Low_complexity Low_complexity 3 70 0 514 327 94 72 chr17 23044795 23045472 -62393008 + HAL1b LINE L1 710 1105 -945 273 350 45 12 chr17 23045473 23045719 -62392761 + HAL1 LINE L1 1451 1704 -803 372 342 38 93 chr17 23045740 23046326 -62392154 + HAL1b LINE L1 1367 4158 -386 1563 169 37 4 chr17 23046355 23046653 -62391827 + AluJo SINE Alu 11 317 0 267 283 65 0 chr17 23046658 23046796 -62391684 + L1MC5 LINE L1 5846 5992 -1816 1817 251 48 6 chr17 23046797 23047319 -62391161 - MLT1H1 LTR MaLR 0 555 12 2233 253 106 86 chr17 23047367 23047543 -62390937 + L1MC5 LINE L1 6041 6212 -1749 2221 103 3 0 chr17 23047543 23047835 -62390645 - AluSg SINE Alu -17 293 1 2233 253 106 86 chr17 23047835 23048199 -62390281 + L1MC5 LINE L1 6212 6567 -1394 1845 173 7 3 chr17 23048199 23048506 -62389974 + AluSx SINE Alu 1 308 -4 2233 253 106 86 chr17 23048506 23049811 -62388669 + L1MC5 LINE L1 6567 7917 -44 337 280 62 83 chr17 23050015 23050208 -62388272 + L1ME LINE L1 5528 5716 -405 349 218 13 0 chr17 23050962 23051040 -62387440 + MLT1J LTR MaLR 98 176 -335 233 220 51 0 chr17 23051120 23051179 -62387301 + MLT1J LTR MaLR 413 474 -37 2133 77 3 7 chr17 23051181 23051492 -62386988 - AluSx SINE Alu 0 310 1 611 252 81 13 chr17 23051583 23051817 -62386663 - LTR16A1 LTR ERVL 0 457 208 246 270 0 14 chr17 23052289 23052363 -62386117 - MIR SINE MIR -76 132 60 466 212 71 0 chr17 23052629 23052742 -62385738 - LTR16C LTR ERVL -74 417 297 410 294 149 0 chr17 23053230 23053424 -62385056 - MIR SINE MIR -9 253 31 253 344 74 0 chr17 23053509 23053631 -62384849 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23053666 23053703 -62384777 + AT_rich Low_complexity Low_complexity 1 37 0 190 294 29 15 chr17 23053882 23053950 -62384530 + L2 LINE L2 3224 3292 -21 191 240 80 48 chr17 23054281 23054406 -62384074 + MIR3 SINE MIR 3 131 -77 278 305 29 0 chr17 23054652 23054757 -62383723 + L3 LINE CR1 1427 1534 -43 1179 179 54 68 chr17 23054856 23054907 -62383573 - MSTD LTR MaLR 0 396 346 1687 160 48 10 chr17 23054907 23055201 -62383279 - AluJo SINE Alu -7 305 1 1179 179 54 68 chr17 23055201 23055502 -62382978 - MSTD LTR MaLR -50 346 49 2207 111 0 9 chr17 23056347 23056662 -62381818 - AluSx SINE Alu 0 312 1 195 341 73 0 chr17 23057529 23057611 -62380869 - L2 LINE L2 0 3313 3226 515 268 61 48 chr17 23057620 23057851 -62380629 - L2 LINE L2 -193 3120 2887 325 243 91 44 chr17 23058420 23058573 -62379907 + MIR SINE MIR 31 189 -19 27 0 0 0 chr17 23058921 23058948 -62379532 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr17 23059011 23059039 -62379441 + AT_rich Low_complexity Low_complexity 1 28 0 498 234 154 37 chr17 23060140 23060354 -62378126 + L2 LINE L2 2815 3053 -219 2242 70 7 20 chr17 23061213 23061512 -62376968 - AluSg SINE Alu -15 295 1 421 356 31 22 chr17 23061550 23061772 -62376708 - L1M4 LINE L1 -3472 2674 2451 284 240 13 0 chr17 23062282 23062357 -62376123 + Charlie8 DNA MER1_type 108 183 -2234 405 0 0 0 chr17 23062493 23062538 -62375942 + (CA)n Simple_repeat Simple_repeat 2 46 0 2132 121 3 13 chr17 23063836 23064151 -62374329 + AluSp SINE Alu 1 312 -1 22 35 0 0 chr17 23064200 23064229 -62374251 + AT_rich Low_complexity Low_complexity 1 29 0 2004 118 31 0 chr17 23064241 23064530 -62373950 + AluSg SINE Alu 1 298 -12 39 50 0 0 chr17 23064555 23064615 -62373865 + AT_rich Low_complexity Low_complexity 1 60 0 796 255 166 9 chr17 23064796 23065232 -62373248 + MLT1H1 LTR MaLR 7 555 0 22 35 0 0 chr17 23065523 23065552 -62372928 + AT_rich Low_complexity Low_complexity 1 29 0 2230 103 7 0 chr17 23065696 23065988 -62372492 + AluSx SINE Alu 1 294 -18 2238 109 3 0 chr17 23065988 23066299 -62372181 + AluSx SINE Alu 1 312 0 1235 119 0 0 chr17 23066299 23066475 -62372005 + AluSg/x SINE Alu 135 310 -2 182 257 195 0 chr17 23066547 23066660 -62371820 + L2 LINE L2 2813 2947 -367 1900 232 102 43 chr17 23066801 23067061 -62371419 + MER21B LTR ERV1 17 260 -603 1839 168 0 0 chr17 23067061 23067347 -62371133 + AluJo SINE Alu 5 290 -22 1900 232 102 43 chr17 23067347 23067360 -62371120 + MER21B LTR ERV1 260 271 -592 2037 127 14 0 chr17 23067360 23067651 -62370829 + AluSx SINE Alu 1 295 -17 1900 232 102 43 chr17 23067651 23068069 -62370411 + MER21B LTR ERV1 271 750 -113 390 276 103 37 chr17 23070446 23070660 -62367820 + L1ME2 LINE L1 5926 6153 -11 228 35 0 0 chr17 23072060 23072089 -62366391 + (CCCCAG)n Simple_repeat Simple_repeat 6 34 0 247 376 0 0 chr17 23072905 23072998 -62365482 - MIR SINE MIR -71 191 99 375 319 57 0 chr17 23073694 23073835 -62364645 + MIR SINE MIR 48 196 -66 406 304 99 6 chr17 23073917 23074078 -62364402 - L2 LINE L2 -2 3311 3136 2102 116 3 0 chr17 23074138 23074431 -62364049 - AluSq SINE Alu -19 294 1 1834 143 10 7 chr17 23074431 23074731 -62363749 - AluJb SINE Alu -11 301 1 266 309 146 8 chr17 23075894 23076017 -62362463 + MIR3 SINE MIR 4 143 -65 246 32 0 0 chr17 23077191 23077222 -62361258 + (CAG)n Simple_repeat Simple_repeat 1 31 0 363 280 77 0 chr17 23077426 23077572 -62360908 - MIR SINE MIR -62 146 30 205 331 55 69 chr17 23077826 23077971 -62360509 + MIR SINE MIR 77 219 -43 254 297 94 31 chr17 23078868 23079060 -62359420 + L2 LINE L2 2821 3024 -248 448 237 141 0 chr17 23079189 23079324 -62359156 + MIR SINE MIR 22 175 -87 466 229 28 0 chr17 23081027 23081197 -62357283 - MIR SINE MIR -7 255 111 872 158 0 0 chr17 23081337 23081470 -62357010 + AluJo/FLAM SINE Alu 1 133 -169 1416 144 98 46 chr17 23081471 23081756 -62356724 + AluJb SINE Alu 13 312 0 348 358 15 15 chr17 23082296 23082430 -62356050 + MIR SINE MIR 85 218 -44 809 93 8 0 chr17 23082745 23082874 -62355606 + (TATTG)n Simple_repeat Simple_repeat 2 131 0 2212 66 3 7 chr17 23082876 23083163 -62355317 - AluY SINE Alu -25 286 1 1517 144 38 15 chr17 23083166 23083429 -62355051 - AluJb SINE Alu -17 295 27 433 279 109 0 chr17 23085118 23085265 -62353215 - MIR SINE MIR -53 209 47 359 237 101 9 chr17 23085495 23085612 -62352868 - MIR SINE MIR -68 140 13 370 225 111 1 chr17 23087028 23087149 -62351331 + MIR SINE MIR 30 162 -46 324 302 33 70 chr17 23087919 23088134 -62350346 - MIR SINE MIR -19 243 37 303 130 0 0 chr17 23089313 23089367 -62349113 + (CGG)n Simple_repeat Simple_repeat 3 56 0 228 235 110 22 chr17 23092985 23093121 -62345359 - L1ME1 LINE L1 -30 6136 5989 318 264 9 52 chr17 23093136 23093252 -62345228 - L1ME1 LINE L1 -222 5946 5834 2281 79 7 0 chr17 23093430 23093733 -62344747 + AluY SINE Alu 1 305 -6 228 186 0 0 chr17 23093733 23093776 -62344704 + L1 LINE L1 5162 5204 -942 2002 100 0 7 chr17 23093776 23094066 -62344414 + AluY SINE Alu 1 288 -23 435 242 0 0 chr17 23094094 23094218 -62344262 + L1 LINE L1 5199 5322 -824 1141 125 0 0 chr17 23095016 23095176 -62343304 - AluSx SINE Alu -147 165 6 1824 81 0 0 chr17 23095950 23096186 -62342294 + AluY SINE Alu 2 237 -74 504 212 7 157 chr17 23096340 23096403 -62342077 - L1ME1 LINE L1 -949 5197 5126 2015 126 0 7 chr17 23096403 23096697 -62341783 - AluSx SINE Alu -20 292 1 504 212 7 157 chr17 23096697 23096813 -62341667 - L1ME1 LINE L1 -1020 5126 5080 2236 94 0 22 chr17 23096813 23097131 -62341349 - AluY SINE Alu 0 311 1 504 212 7 157 chr17 23097131 23097256 -62341224 - L1ME1 LINE L1 -1066 5080 4938 2241 87 3 0 chr17 23097326 23097615 -62340865 - AluSx SINE Alu -22 290 1 619 140 0 11 chr17 23097615 23097708 -62340772 - AluSq/x SINE Alu -172 141 50 480 258 11 34 chr17 23097932 23098110 -62340370 + L1MC4 LINE L1 7865 8038 -4 249 302 151 16 chr17 23098393 23098519 -62339961 - MIR3 SINE MIR -51 157 15 302 0 0 26 chr17 23098781 23098820 -62339660 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 325 151 38 0 chr17 23098856 23098909 -62339571 - MER66B LTR ERV1 -142 344 290 608 302 88 74 chr17 23098924 23099141 -62339339 - L1ME4a LINE L1 -202 5919 5692 2010 126 24 0 chr17 23099141 23099435 -62339045 - AluSq SINE Alu -12 301 1 608 302 88 74 chr17 23099435 23099624 -62338856 - L1ME4a LINE L1 -429 5692 5507 2240 68 3 59 chr17 23099752 23100075 -62338405 - AluSc SINE Alu -4 305 1 1529 188 49 0 chr17 23100287 23100574 -62337906 + AluJo SINE Alu 3 303 -9 778 150 7 54 chr17 23101170 23101317 -62337163 + FLAM_C SINE Alu 2 141 -2 1857 130 32 0 chr17 23101394 23101678 -62336802 + AluSx SINE Alu 1 293 -19 921 104 0 0 chr17 23101816 23101941 -62336539 + AluSp SINE Alu 1 125 -188 877 164 77 5 chr17 23101946 23102141 -62336339 - MER41-int LTR ERV1 -2998 2948 2740 * 882 138 66 18 chr17 23102139 23102364 -62336116 - MER41-int LTR ERV1 -2443 2572 1835 * 1250 223 21 13 chr17 23102359 23102664 -62335816 - MER41-int LTR ERV1 -3592 2354 1235 893 85 78 0 chr17 23103693 23103822 -62334658 + MER85 DNA T2_type 1 139 0 237 282 18 18 chr17 23103997 23104107 -62334373 + GA-rich Low_complexity Low_complexity 2 111 0 535 264 65 87 chr17 23105295 23105946 -62332534 - HSREP522 Satellite telomeric -99 636 1 2509 238 100 96 chr17 23107057 23107397 -62331083 + L1MC5 LINE L1 6278 6615 -1346 1847 161 7 0 chr17 23107397 23107695 -62330785 + AluSx SINE Alu 3 302 -10 2509 238 100 96 chr17 23107695 23109007 -62329473 + L1MC5 LINE L1 6615 7917 -44 243 245 85 101 chr17 23109216 23109404 -62329076 + L1ME LINE L1 5532 5716 -405 397 205 13 0 chr17 23110158 23110236 -62328244 + MLT1J LTR MaLR 98 176 -335 233 222 28 130 chr17 23110316 23110377 -62328103 + MLT1J LTR MaLR 413 461 -50 2102 67 7 7 chr17 23110377 23110683 -62327797 - AluSx SINE Alu 0 306 1 233 222 28 130 chr17 23110683 23110728 -62327752 + MLT1J LTR MaLR 461 509 -2 672 261 77 13 chr17 23110774 23111008 -62327472 - LTR16A1 LTR ERVL 0 457 209 255 267 0 13 chr17 23111483 23111558 -62326922 - MIR SINE MIR -131 131 58 543 232 195 22 chr17 23111775 23111960 -62326520 - LTR16C LTR ERVL -9 482 266 374 271 115 36 chr17 23112430 23112622 -62325858 - MIR SINE MIR -9 253 47 249 336 74 0 chr17 23112710 23112832 -62325648 + L2 LINE L2 2710 2840 -474 23 54 0 0 chr17 23112867 23112904 -62325576 + AT_rich Low_complexity Low_complexity 1 37 0 191 290 29 14 chr17 23113083 23113152 -62325328 + L2 LINE L2 3224 3293 -20 197 224 80 48 chr17 23113486 23113611 -62324869 + MIR3 SINE MIR 3 131 -77 276 295 29 0 chr17 23113857 23113962 -62324518 + L3 LINE CR1 1427 1534 -43 1238 187 54 68 chr17 23114061 23114112 -62324368 - MSTD LTR MaLR 0 396 346 1622 165 47 10 chr17 23114112 23114409 -62324071 - AluJo SINE Alu -4 308 1 1238 187 54 68 chr17 23114409 23114710 -62323770 - MSTD LTR MaLR -50 346 49 2170 111 0 9 chr17 23115572 23115887 -62322593 - AluSx SINE Alu 0 312 1 228 67 0 0 chr17 23116713 23116743 -62321737 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 193 312 78 0 chr17 23116760 23116837 -62321643 - L2 LINE L2 -5 3308 3226 491 268 61 48 chr17 23116849 23117077 -62321403 - L2 LINE L2 -196 3117 2887 316 301 44 9 chr17 23117646 23117759 -62320721 + MIR SINE MIR 31 147 -115 22 0 0 0 chr17 23118147 23118169 -62320311 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 23118232 23118260 -62320220 + AT_rich Low_complexity Low_complexity 1 28 0 478 211 189 11 chr17 23119405 23119585 -62318895 + L2 LINE L2 2842 3053 -219 227 175 0 0 chr17 23120317 23120357 -62318123 - Alu SINE Alu -268 40 1 2132 87 7 20 chr17 23120444 23120742 -62317738 - AluSg SINE Alu -16 294 1 385 337 41 25 chr17 23120786 23120982 -62317498 - L1M4 LINE L1 -3478 2668 2470 273 240 13 0 chr17 23121513 23121588 -62316892 + Charlie8 DNA MER1_type 97 172 -2245 297 0 0 0 chr17 23121727 23121760 -62316720 + (CA)n Simple_repeat Simple_repeat 2 34 0 2105 132 3 13 chr17 23123062 23123366 -62315114 + AluSp SINE Alu 1 301 -12 22 35 0 0 chr17 23123404 23123433 -62315047 + AT_rich Low_complexity Low_complexity 1 29 0 2097 125 28 0 chr17 23123445 23123734 -62314746 + AluSg SINE Alu 1 297 -13 180 109 36 18 chr17 23123764 23123819 -62314661 + (TATAA)n Simple_repeat Simple_repeat 1 56 0 765 231 193 64 chr17 23123962 23124433 -62314047 + MLT1H1 LTR MaLR 19 555 0 2295 119 7 0 chr17 23124895 23125197 -62313283 + AluSx SINE Alu 1 304 -8 2285 116 0 0 chr17 23125197 23125499 -62312981 + AluSx SINE Alu 1 302 -10 1276 125 0 0 chr17 23125501 23125677 -62312803 + AluSg/x SINE Alu 135 310 -2 1940 229 100 49 chr17 23126003 23126267 -62312213 + MER21B LTR ERV1 17 266 -597 1816 170 3 0 chr17 23126267 23126550 -62311930 + AluJo SINE Alu 7 290 -22 1940 229 100 49 chr17 23126550 23126563 -62311917 + MER21B LTR ERV1 266 277 -586 2123 128 14 0 chr17 23126563 23126851 -62311629 + AluSx SINE Alu 1 292 -20 1940 229 100 49 chr17 23126851 23127270 -62311210 + MER21B LTR ERV1 277 750 -113 183 320 27 0 chr17 23128881 23128956 -62309524 - MIR SINE MIR -107 155 79 22 0 0 0 chr17 23130275 23130297 -62308183 + AT_rich Low_complexity Low_complexity 1 22 0 452 348 61 7 chr17 23130309 23130592 -62307888 + L2 LINE L2 2748 3047 -266 2420 212 40 7 chr17 23130653 23131256 -62307224 - L1MB7 LINE L1 0 6184 5562 3871 268 58 18 chr17 23131272 23132939 -62305541 - L1MB7 LINE L1 -729 5445 3715 1180 69 0 14 chr17 23133054 23133199 -62305281 - AluSq/x SINE Alu -169 143 1 521 224 67 0 chr17 23133287 23133452 -62305028 + L1M4 LINE L1 3927 4102 -2044 246 347 124 44 chr17 23133453 23133727 -62304753 + L2 LINE L2 1214 1509 -1805 217 228 0 53 chr17 23134555 23134612 -62303868 + L2 LINE L2 3217 3270 -2 2294 98 7 0 chr17 23134867 23135163 -62303317 + AluSx SINE Alu 12 309 -3 435 332 53 68 chr17 23135180 23135520 -62302960 - L1M4 LINE L1 -1313 4833 4499 28 29 0 0 chr17 23135620 23135655 -62302825 + AT_rich Low_complexity Low_complexity 1 35 0 26 101 0 0 chr17 23135755 23135844 -62302636 + AT_rich Low_complexity Low_complexity 1 89 0 22 0 0 0 chr17 23135963 23135985 -62302495 + AT_rich Low_complexity Low_complexity 1 22 0 1610 178 3 66 chr17 23136055 23136211 -62302269 + AluJo SINE Alu 1 128 -184 2470 88 0 0 chr17 23136211 23136518 -62301962 + AluY SINE Alu 1 307 -4 1610 178 3 66 chr17 23136518 23136681 -62301799 + AluJo SINE Alu 128 300 -12 1964 115 45 7 chr17 23136700 23136987 -62301493 + AluSg SINE Alu 1 298 -12 29 0 0 0 chr17 23137013 23137042 -62301438 + AT_rich Low_complexity Low_complexity 1 29 0 242 325 84 19 chr17 23137161 23137315 -62301165 - MIR3 SINE MIR -4 204 41 182 120 0 0 chr17 23137380 23137405 -62301075 + MER5B DNA MER1_type 24 48 -130 272 244 39 26 chr17 23137664 23137742 -62300738 - L1MC4a LINE L1 -1873 5935 5857 2201 97 0 20 chr17 23137744 23138042 -62300438 + AluY SINE Alu 1 292 -19 2251 103 3 0 chr17 23138109 23138399 -62300081 + AluSp SINE Alu 1 291 -22 2294 99 3 22 chr17 23139838 23140152 -62298328 + AluSc SINE Alu 1 308 -1 1983 157 3 0 chr17 23140938 23141232 -62297248 + AluSx SINE Alu 1 295 -17 2056 147 0 16 chr17 23141422 23141559 -62296921 + AluSx SINE Alu 1 139 -173 2305 113 3 0 chr17 23141559 23141861 -62296619 + AluSg SINE Alu 1 303 -7 2056 147 0 16 chr17 23141861 23142037 -62296443 + AluSx SINE Alu 139 309 -3 219 312 13 26 chr17 23142180 23142257 -62296223 - MIR SINE MIR -3 259 184 312 70 0 0 chr17 23142661 23142704 -62295776 + (CA)n Simple_repeat Simple_repeat 2 44 0 719 281 123 37 chr17 23142731 23143304 -62295176 + L2 LINE L2 2584 3209 -104 227 233 148 79 chr17 23143372 23143853 -62294627 + L1M4 LINE L1 4419 4932 -1214 * 232 244 8 94 chr17 23143821 23143948 -62294532 + L1P LINE L1 4901 5016 -1130 410 261 108 25 chr17 23144296 23144453 -62294027 - MIR SINE MIR -59 203 34 2372 97 3 0 chr17 23144516 23144824 -62293656 + AluSp SINE Alu 5 313 0 1559 167 11 8 chr17 23144927 23145191 -62293289 + AluSq SINE Alu 1 265 -48 657 209 29 3 chr17 23145994 23146148 -62292332 + MIR SINE MIR 25 181 -63 250 291 63 47 chr17 23146259 23146386 -62292094 - MIR SINE MIR -101 161 33 219 244 41 174 chr17 23146644 23146984 -62291496 - L2 LINE L2 -89 3183 2889 2312 94 0 7 chr17 23147326 23147623 -62290857 - AluSx SINE Alu -17 295 1 2123 89 4 0 chr17 23147668 23147939 -62290541 - AluSg SINE Alu -38 272 1 372 196 147 0 chr17 23148044 23148146 -62290334 - MLT1H LTR MaLR 0 549 433 657 231 97 21 chr17 23148171 23148409 -62290071 - MLT1H LTR MaLR -221 328 73 2244 112 3 0 chr17 23148666 23148961 -62289519 + AluSq SINE Alu 1 296 -17 494 264 118 1 chr17 23149692 23149845 -62288635 - MIR SINE MIR -34 228 60 614 282 57 19 chr17 23149928 23150137 -62288343 - MIR SINE MIR -33 229 13 437 280 217 6 chr17 23150542 23150717 -62287763 - MIR SINE MIR -12 250 39 485 315 21 0 chr17 23150858 23151001 -62287479 + MIR SINE MIR 95 240 -22 183 238 270 0 chr17 23151473 23151536 -62286944 - MIR SINE MIR -118 144 65 452 267 35 41 chr17 23151549 23151721 -62286759 - MIR SINE MIR -78 184 14 446 275 0 0 chr17 23152324 23152491 -62285989 + (TG)n Simple_repeat Simple_repeat 1 167 0 524 256 99 37 chr17 23152732 23152923 -62285557 - MIR SINE MIR -20 242 40 1575 236 83 36 chr17 23153485 23153524 -62284956 - L1MB5 LINE L1 0 6174 6138 2412 89 7 0 chr17 23153524 23153828 -62284652 - AluSx SINE Alu -6 306 1 1575 236 83 36 chr17 23153828 23154317 -62284163 - L1MB5 LINE L1 -36 6138 5621 226 276 89 106 chr17 23154514 23154637 -62283843 - MIR SINE MIR -72 136 16 241 315 36 0 chr17 23155307 23155418 -62283062 - MIR SINE MIR -58 150 36 758 259 232 18 chr17 23155505 23155845 -62282635 - L2 LINE L2 -3 3310 2898 291 238 0 0 chr17 23156388 23156451 -62282029 + MIR SINE MIR 90 152 -110 373 273 118 8 chr17 23156941 23157271 -62281209 + LTR33A LTR ERVL 152 792 -3 268 283 4 8 chr17 23157888 23158148 -62280332 + (CA)n Simple_repeat Simple_repeat 1 259 0 215 264 11 23 chr17 23158149 23158236 -62280244 + (CATA)n Simple_repeat Simple_repeat 4 89 0 1804 145 0 35 chr17 23158921 23159231 -62279249 - AluJo SINE Alu 0 312 14 348 179 36 12 chr17 23162244 23162328 -62276152 - MER65C LTR ERV1 0 461 376 5864 96 26 15 chr17 23162431 23162620 -62275860 + L1PA14 LINE L1 4815 5000 -1161 2192 162 0 23 chr17 23162620 23162965 -62275515 + MER1B DNA MER1_type 1 337 0 5864 96 26 15 chr17 23162965 23164110 -62274370 + L1PA14 LINE L1 5000 6152 -9 886 226 21 8 chr17 23164117 23164352 -62274128 - MER65C LTR ERV1 -124 337 100 3586 235 85 41 chr17 23165510 23165723 -62272757 - L1M4 LINE L1 -5140 1402 1200 1834 156 14 3 chr17 23165723 23166011 -62272469 + AluSx SINE Alu 1 291 -21 3586 235 85 41 chr17 23166011 23166359 -62272121 - L1M4 LINE L1 -5342 1200 869 1733 161 38 0 chr17 23166359 23166626 -62271854 + AluJo SINE Alu 1 277 -35 208 0 62 0 chr17 23166632 23166664 -62271816 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 3586 235 85 41 chr17 23166664 23167416 -62271064 - L1M4 LINE L1 -5677 865 23 459 281 140 9 chr17 23167426 23167647 -62270833 + Charlie2 DNA MER1_type 69 318 -2544 1435 200 61 47 chr17 23167666 23168160 -62270320 + Charlie2 DNA MER1_type 1866 2366 -496 297 274 112 17 chr17 23169175 23169354 -62269126 + MLT1J2 LTR MaLR 21 216 -234 403 296 47 52 chr17 23169774 23169860 -62268620 - MIR SINE MIR -22 240 155 2149 132 0 13 chr17 23169860 23170171 -62268309 - AluJo SINE Alu -5 307 1 403 296 47 52 chr17 23170171 23170317 -62268163 - MIR SINE MIR -107 155 9 1546 178 0 19 chr17 23170635 23170894 -62267586 - AluJo SINE Alu -54 258 5 914 165 14 104 chr17 23171632 23171844 -62266636 - AluJo SINE Alu -117 195 3 392 291 89 28 chr17 23171862 23172075 -62266405 + MIR SINE MIR 1 226 -36 266 274 12 0 chr17 23172202 23172286 -62266194 + L1ME3A LINE L1 6081 6165 -5 2088 102 0 42 chr17 23173414 23173747 -62264733 + L1PA13 LINE L1 5845 6163 0 603 249 22 11 chr17 23173749 23173934 -62264546 - MER65C LTR ERV1 -133 328 142 14678 115 35 7 chr17 23174613 23176610 -62261870 + Tigger1 DNA MER2_type 42 2114 -304 1936 150 22 29 chr17 23176610 23176924 -62261556 + AluJo SINE Alu 1 312 0 14678 115 35 7 chr17 23176924 23177238 -62261242 + Tigger1 DNA MER2_type 2114 2418 0 2199 163 71 19 chr17 23177787 23178198 -62260282 - MSTB1 LTR MaLR 0 432 1 1301 140 0 5 chr17 23178677 23178870 -62259610 + AluJo SINE Alu 121 312 0 1757 125 84 6 chr17 23178870 23179181 -62259299 + Tigger1 DNA MER2_type 2083 2417 -1 2197 163 71 19 chr17 23179732 23180143 -62258337 - MSTB1 LTR MaLR 0 432 1 447 305 144 11 chr17 23181742 23182096 -62256384 - MLT1H1 LTR MaLR -121 434 34 431 331 43 23 chr17 23182605 23183164 -62255316 - L1M4 LINE L1 -839 5307 4735 219 69 0 0 chr17 23183179 23183208 -62255272 + (TG)n Simple_repeat Simple_repeat 2 30 0 1077 258 103 64 chr17 23184981 23185551 -62252929 - L1M4 LINE L1 -849 5297 4698 1810 165 50 0 chr17 23185551 23185848 -62252632 - AluSx SINE Alu 0 312 1 1077 258 103 64 chr17 23185848 23185906 -62252574 - L1M4 LINE L1 -1448 4698 4644 269 20 80 0 chr17 23186605 23186655 -62251825 + (TTTG)n Simple_repeat Simple_repeat 4 57 0 184 271 0 71 chr17 23186924 23186994 -62251486 - L2 LINE L2 -1916 1398 1334 2841 168 4 15 chr17 23188724 23189266 -62249214 + L1MB4 LINE L1 5389 5924 -256 2693 152 19 2 chr17 23189281 23189703 -62248777 - MSTB1 LTR MaLR -3 429 1 257 146 0 0 chr17 23189705 23189746 -62248734 + L1M4 LINE L1 3534 3574 -2572 258 216 10 72 chr17 23189753 23189850 -62248630 - MLT1E1 LTR MaLR -278 376 286 * 276 244 100 0 chr17 23189829 23189919 -62248561 - MLT1E1 LTR MaLR -487 167 69 1470 214 127 37 chr17 23190459 23190922 -62247558 - MLT1D LTR MaLR 0 505 1 1132 263 30 0 chr17 23191086 23191386 -62247094 - ERVL LTR ERVL -1122 4642 4334 1282 158 54 15 chr17 23191402 23191661 -62246819 - MLT1B LTR MaLR -121 269 1 240 184 0 0 chr17 23192119 23192168 -62246312 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 235 116 23 23 chr17 23192213 23192256 -62246224 - L2 LINE L2 -75 3238 3196 756 199 102 42 chr17 23192256 23192472 -62246008 - MER58B DNA MER1_type 0 341 113 950 112 0 0 chr17 23192737 23192862 -62245618 + FLAM_C SINE Alu 1 125 -8 233 56 0 28 chr17 23194034 23194070 -62244410 + (CA)n Simple_repeat Simple_repeat 2 36 0 282 309 20 26 chr17 23195224 23195376 -62243104 + (TCTG)n Simple_repeat Simple_repeat 2 152 0 887 298 98 24 chr17 23195621 23196194 -62242286 - L1ME1 LINE L1 -9 6157 5543 180 0 0 0 chr17 23196453 23196473 -62242007 + (CCCCAG)n Simple_repeat Simple_repeat 2 21 0 283 154 123 31 chr17 23196671 23196736 -62241744 - MIR SINE MIR -105 157 87 425 221 9 0 chr17 23197379 23197492 -62240988 + Charlie4 DNA MER1_type 1780 1893 -68 330 194 28 65 chr17 23197749 23197857 -62240623 - L2 LINE L2 -19 3294 3191 289 350 50 0 chr17 23197990 23198130 -62240350 + L2 LINE L2 2915 3061 -211 224 237 247 0 chr17 23198659 23198752 -62239728 - MIR SINE MIR -63 145 30 293 292 89 30 chr17 23199227 23199566 -62238914 - L2 LINE L2 -297 3016 2657 355 301 45 23 chr17 23200286 23200419 -62238061 - MIR SINE MIR -80 182 47 3784 125 22 16 chr17 23201735 23202054 -62236426 + L1PA14 LINE L1 4687 5003 -1158 2239 154 0 23 chr17 23202054 23202399 -62236081 + MER1B DNA MER1_type 1 337 0 3784 125 22 16 chr17 23202399 23203271 -62235209 + L1PA14 LINE L1 5003 5882 -279 279 243 14 14 chr17 23203403 23203473 -62235007 + L2 LINE L2 3180 3249 -64 21 0 0 0 chr17 23203507 23203528 -62234952 + AT_rich Low_complexity Low_complexity 1 21 0 2229 117 0 3 chr17 23204038 23204337 -62234143 - AluSg SINE Alu -12 298 1 333 279 143 37 chr17 23206012 23206239 -62232241 - L1ME LINE L1 -481 5681 5426 316 271 47 28 chr17 23206240 23206347 -62232133 - L1ME LINE L1 -2405 5403 5295 953 106 0 0 chr17 23206473 23206596 -62231884 - AluSg/x SINE Alu -36 276 154 3590 189 53 6 chr17 23206603 23207673 -62230807 - L1MB7 LINE L1 -76 6108 4997 445 294 154 48 chr17 23207832 23208230 -62230250 - L1MDa LINE L1 -4440 1689 1254 540 265 118 19 chr17 23208252 23208565 -62229915 - L1MDa LINE L1 -4880 1239 896 263 289 94 62 chr17 23208698 23208826 -62229654 + MIR SINE MIR 112 243 -19 358 330 126 15 chr17 23208828 23209089 -62229391 + L1M4 LINE L1 4376 4665 -1481 2124 108 10 7 chr17 23209092 23209407 -62229073 + AluY SINE Alu 1 311 0 485 241 71 14 chr17 23210026 23210167 -62228313 - MIR SINE MIR -99 163 15 545 241 121 54 chr17 23210186 23210410 -62228070 + MIR SINE MIR 23 261 -1 423 234 0 0 chr17 23211274 23211398 -62227082 + (TCCA)n Simple_repeat Simple_repeat 3 126 0 184 288 225 0 chr17 23211593 23211673 -62226807 - MIR SINE MIR -64 144 47 281 293 0 0 chr17 23211822 23211897 -62226583 + MIR SINE MIR 19 93 -115 330 203 0 0 chr17 23212071 23212130 -62226350 - MIR SINE MIR -89 119 61 360 248 20 94 chr17 23212144 23212293 -62226187 + MIR3 SINE MIR 44 181 -27 227 320 231 15 chr17 23213492 23213886 -62224594 - L2 LINE L2 -214 3058 2579 609 213 0 0 chr17 23214555 23214724 -62223756 + (ATG)n Simple_repeat Simple_repeat 2 170 0 566 220 6 0 chr17 23214770 23214947 -62223533 + (ATG)n Simple_repeat Simple_repeat 3 180 0 219 106 45 45 chr17 23214949 23215015 -62223465 + (ATGGTG)n Simple_repeat Simple_repeat 1 66 0 630 246 0 0 chr17 23215067 23215193 -62223287 - FLAM_A SINE Alu -7 126 1 406 251 38 44 chr17 23215199 23215382 -62223098 + L1ME LINE L1 5638 5819 -302 496 269 35 7 chr17 23215492 23215633 -62222847 + L2 LINE L2 3167 3311 -2 286 263 161 76 chr17 23215785 23216021 -62222459 + MLT1L LTR MaLR 135 390 -225 303 334 38 10 chr17 23217401 23217596 -62220884 - MIR SINE MIR -29 233 33 234 0 0 0 chr17 23220652 23220678 -62217802 + (TA)n Simple_repeat Simple_repeat 1 26 0 495 48 0 0 chr17 23222057 23222119 -62216361 + (GA)n Simple_repeat Simple_repeat 2 63 0 243 0 0 0 chr17 23222129 23222156 -62216324 + (A)n Simple_repeat Simple_repeat 1 27 0 907 287 71 2 chr17 23223470 23223934 -62214546 - L1M4 LINE L1 -3404 2742 2247 38 61 0 0 chr17 23223935 23224001 -62214479 + AT_rich Low_complexity Low_complexity 1 66 0 832 160 183 6 chr17 23224143 23224312 -62214168 - AluSg/x SINE Alu -27 282 84 1007 194 94 43 chr17 23224312 23224641 -62213839 + MER119 DNA MER1_type 75 420 -163 1997 244 66 47 chr17 23224642 23225699 -62212781 - L1ME1 LINE L1 -79 6087 4997 257 314 39 0 chr17 23225724 23225826 -62212654 - MLT1K LTR MaLR -104 484 379 959 152 52 9 chr17 23226942 23227152 -62211328 + MER33 DNA MER1_type 1 219 -105 1099 244 155 40 chr17 23227169 23227640 -62210840 + L1MC4 LINE L1 7278 7802 -240 593 294 58 17 chr17 23227644 23227937 -62210543 + HERVL LTR ERVL 4077 4381 -1273 362 178 0 74 chr17 23228423 23228586 -62209894 + (ATGGTG)n Simple_repeat Simple_repeat 1 151 0 374 227 64 27 chr17 23228977 23229087 -62209393 - MIR SINE MIR -13 249 136 2527 174 16 4 chr17 23229089 23229578 -62208902 - L1MB2 LINE L1 -7 6164 5670 204 290 32 0 chr17 23229888 23229950 -62208530 - L2 LINE L2 -1 3312 3249 613 294 64 5 chr17 23230093 23230311 -62208169 - MIR SINE MIR -1 261 31 357 290 19 0 chr17 23231868 23231975 -62206505 - L2 LINE L2 -18 3254 3146 2351 119 0 0 chr17 23232674 23232984 -62205496 - AluSg SINE Alu 0 310 1 282 288 42 8 chr17 23233278 23233396 -62205084 - MER94 DNA DNA -2 132 11 1774 217 82 16 chr17 23233494 23233983 -62204497 - MER90 LTR ERV1 0 614 94 507 261 128 15 chr17 23234753 23234956 -62203524 + MIR SINE MIR 30 255 -7 344 221 48 77 chr17 23235486 23235590 -62202890 - MIR SINE MIR -70 192 92 190 405 9 0 chr17 23235804 23235915 -62202565 + L2 LINE L2 2748 2859 -455 207 0 0 0 chr17 23236111 23236134 -62202346 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1983 120 0 27 chr17 23236156 23236448 -62202032 - AluSq SINE Alu -19 294 11 2039 121 17 10 chr17 23236563 23236860 -62201620 - AluSq SINE Alu -14 299 1 957 148 7 0 chr17 23236861 23237003 -62201477 - AluY SINE Alu -168 143 1 1288 159 120 33 chr17 23238023 23238324 -62200156 - SST1 Satellite centromeric 0 1563 1237 887 163 13 0 chr17 23238329 23238482 -62199998 + AluSg/x SINE Alu 157 311 -1 7334 162 16 17 chr17 23238548 23239963 -62198517 - SST1 Satellite centromeric -150 1413 1 1951 298 61 40 chr17 23240512 23241473 -62197007 - SST1 Satellite centromeric -324 1239 245 345 75 0 0 chr17 23241473 23241526 -62196954 + (CCCCAG)n Simple_repeat Simple_repeat 5 57 0 1951 298 61 40 chr17 23241526 23241777 -62196703 - SST1 Satellite centromeric -1318 245 1 217 259 25 0 chr17 23242520 23242601 -62195879 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 * 239 173 19 0 chr17 23242558 23242610 -62195870 + GA-rich Low_complexity Low_complexity 2 54 0 219 103 0 0 chr17 23242617 23242656 -62195824 + (CA)n Simple_repeat Simple_repeat 2 40 0 2618 280 57 51 chr17 23242658 23251213 -62187267 - SST1 Satellite centromeric -45 8605 1 252 293 10 11 chr17 23251459 23251562 -62186918 + MIR SINE MIR 49 144 -64 362 286 81 37 chr17 23252412 23252573 -62185907 - Charlie4a DNA MER1_type -61 447 280 253 150 0 0 chr17 23253205 23253245 -62185235 - MIR SINE MIR -60 148 109 414 205 79 55 chr17 23254355 23254482 -62183998 - L1M4 LINE L1 -2991 3155 3026 576 266 118 63 chr17 23254499 23254778 -62183702 + MER77 LTR ERV1 323 599 -6 1599 208 18 0 chr17 23255405 23255746 -62182734 - MER7A DNA MER2_type 0 346 2 26 0 0 0 chr17 23255804 23255830 -62182650 + AT_rich Low_complexity Low_complexity 1 26 0 206 282 24 24 chr17 23256023 23256108 -62182372 + (TATG)n Simple_repeat Simple_repeat 3 87 0 24 0 0 0 chr17 23257019 23257043 -62181437 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr17 23259015 23259043 -62179437 + AT_rich Low_complexity Low_complexity 1 28 0 239 343 89 20 chr17 23260937 23261733 -62176747 + L1MEd LINE L1 506 1398 -4867 237 234 43 21 chr17 23262126 23262220 -62176260 + MIR SINE MIR 48 143 -119 504 310 107 9 chr17 23263038 23263254 -62175226 + MIR SINE MIR 20 256 -6 413 324 29 29 chr17 23263427 23263631 -62174849 + L2 LINE L2 2848 3051 -262 376 256 0 0 chr17 23263728 23263810 -62174670 + L2 LINE L2 3231 3312 -1 344 330 48 24 chr17 23263998 23264207 -62174273 - L2 LINE L2 -177 3095 2882 228 253 253 0 chr17 23265067 23265166 -62173314 + L2 LINE L2 3174 3297 -16 199 250 0 0 chr17 23265132 23265172 -62173308 + MIR SINE MIR 219 258 -4 * 1019 269 106 10 chr17 23265223 23265370 -62173110 - L2 LINE L2 -1 3312 3181 1601 148 74 35 chr17 23265370 23265654 -62172826 + AluJb SINE Alu 1 295 -17 1019 269 106 10 chr17 23265654 23265923 -62172557 - L2 LINE L2 -132 3181 2856 231 325 98 35 chr17 23266436 23266691 -62171789 + L2 LINE L2 2917 3187 -85 300 248 228 0 chr17 23266989 23267090 -62171390 + L2 LINE L2 3189 3312 -1 301 238 90 66 chr17 23267096 23267218 -62171262 - MIR SINE MIR -85 177 53 274 314 51 22 chr17 23267576 23267713 -62170767 - MIR SINE MIR -80 182 42 238 185 49 74 chr17 23267789 23267870 -62170610 - MIR SINE MIR -107 155 77 2579 71 0 3 chr17 23268157 23268465 -62170015 - AluSg SINE Alu -3 307 1 402 269 37 0 chr17 23268518 23268626 -62169854 - L2 LINE L2 0 3272 3161 410 297 79 60 chr17 23268920 23269078 -62169402 + HAL1 LINE L1 1 155 -2352 1856 171 0 0 chr17 23269078 23269370 -62169110 - AluJo SINE Alu -20 292 1 410 297 79 60 chr17 23269370 23269592 -62168888 + HAL1 LINE L1 155 388 -2119 368 192 26 13 chr17 23269587 23269665 -62168815 + HAL1 LINE L1 1304 1382 -1125 * 626 272 70 32 chr17 23269648 23269964 -62168516 + HAL1 LINE L1 2022 2349 -158 1592 80 0 55 chr17 23271366 23271604 -62166876 + AluSx SINE Alu 1 225 -87 321 276 47 39 chr17 23271900 23272027 -62166453 + L1ME4a LINE L1 5979 6106 -15 30 27 0 0 chr17 23272067 23272104 -62166376 + AT_rich Low_complexity Low_complexity 1 37 0 191 310 84 0 chr17 23272123 23272194 -62166286 + L2 LINE L2 2991 3067 -205 1178 139 11 5 chr17 23272587 23272774 -62165706 - AluSx SINE Alu -124 188 1 376 89 56 22 chr17 23272774 23272864 -62165616 - Charlie5 DNA MER1_type -77 2535 2443 1634 78 13 13 chr17 23272864 23273094 -62165386 + L1PA6 LINE L1 5922 6151 -3 2209 125 0 0 chr17 23273119 23273431 -62165049 - AluSx SINE Alu 0 312 1 256 45 0 45 chr17 23273443 23273487 -62164993 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 1216 104 16 6 chr17 23273499 23273682 -62164798 - AluSg/x SINE Alu -25 285 101 2308 102 0 3 chr17 23274061 23274374 -62164106 - AluSx SINE Alu 0 312 1 240 213 0 0 chr17 23274528 23274575 -62163905 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 289 240 130 0 chr17 23274577 23274677 -62163803 - L2 LINE L2 0 3313 3201 1774 145 31 3 chr17 23274708 23274997 -62163483 + AluJb SINE Alu 1 297 -15 658 111 154 17 chr17 23275136 23275253 -62163227 + FLAM_C SINE Alu 1 133 0 2022 90 25 0 chr17 23275274 23275597 -62162883 - AluSp SINE Alu 0 330 1 241 303 0 0 chr17 23275828 23275904 -62162576 + C-rich Low_complexity Low_complexity 1 76 0 423 196 0 0 chr17 23275917 23276050 -62162430 + C-rich Low_complexity Low_complexity 1 133 0 225 139 0 0 chr17 23276189 23276232 -62162248 + (TC)n Simple_repeat Simple_repeat 1 43 0 1796 146 0 10 chr17 23276287 23276618 -62161862 - AluSx SINE Alu 0 328 1 1414 182 128 0 chr17 23276620 23276878 -62161602 - AluJb SINE Alu -11 291 1 455 235 83 78 chr17 23276880 23277110 -62161370 + MER102b DNA MER1_type 88 318 -23 2232 73 10 3 chr17 23277146 23277447 -62161033 - AluSq SINE Alu -10 303 1 276 354 101 25 chr17 23277573 23277771 -62160709 + MIR SINE MIR 15 227 -35 347 109 36 0 chr17 23278113 23278168 -62160312 - Alu SINE Alu -246 57 1 1612 251 37 9 chr17 23278451 23278906 -62159574 - L1MB5 LINE L1 0 6174 5707 1097 251 117 3 chr17 23279391 23279725 -62158755 + MLT1B LTR MaLR 1 372 -18 315 131 10 172 chr17 23280049 23280148 -62158332 - MLT1B LTR MaLR -307 83 1 919 162 7 0 chr17 23280174 23280328 -62158152 + FRAM SINE Alu 2 156 -20 924 248 133 0 chr17 23280772 23281058 -62157422 + MLT1G LTR MaLR 1 324 -266 447 233 60 45 chr17 23281054 23281187 -62157293 + MLT1G LTR MaLR 454 588 -2 * 554 239 0 0 chr17 23281722 23281831 -62156649 + MER81 DNA DNA 2 110 -4 676 241 100 26 chr17 23282487 23282738 -62155742 - MLT1G LTR MaLR -288 242 1 442 298 85 0 chr17 23283605 23283746 -62154734 + MIR SINE MIR 2 154 -108 250 317 69 57 chr17 23283890 23284072 -62154408 + MIR SINE MIR 6 193 -49 482 214 22 116 chr17 23284522 23284629 -62153851 + L1ME2 LINE L1 5214 5289 -877 2307 83 26 0 chr17 23284629 23284931 -62153549 + AluSg SINE Alu 1 310 0 482 214 22 116 chr17 23284931 23285062 -62153418 + L1ME2 LINE L1 5289 5431 -735 768 65 19 9 chr17 23285170 23285278 -62153202 + AluSp/q SINE Alu 188 296 -17 192 77 0 0 chr17 23285317 23285343 -62153137 + (T)n Simple_repeat Simple_repeat 1 26 0 1779 52 4 21 chr17 23285343 23285576 -62152904 - AluY SINE Alu -82 229 1 2852 102 11 9 chr17 23285576 23286015 -62152465 + MER4D LTR ERV1 204 643 -260 1272 136 15 157 chr17 23286045 23286383 -62152097 + AluJo SINE Alu 11 300 -12 1569 76 84 12 chr17 23286385 23286634 -62151846 + MER4D LTR ERV1 637 903 0 688 252 106 57 chr17 23286634 23286736 -62151744 + L1ME2 LINE L1 5792 5887 -277 1960 138 0 0 chr17 23286736 23287032 -62151448 + AluSx SINE Alu 1 296 -16 688 252 106 57 chr17 23287032 23287211 -62151269 + L1ME2 LINE L1 5887 6087 -77 281 283 98 0 chr17 23287385 23287477 -62151003 + MIR3 SINE MIR 82 182 -26 306 242 26 108 chr17 23287623 23287817 -62150663 + MIR SINE MIR 79 256 -6 25 0 0 0 chr17 23287927 23287952 -62150528 + GC_rich Low_complexity Low_complexity 1 25 0 340 299 62 67 chr17 23288246 23288440 -62150040 - L1MDa LINE L1 -3965 2575 2383 514 266 34 17 chr17 23288852 23289029 -62149451 + MIR SINE MIR 72 251 -11 1928 110 20 14 chr17 23289090 23289382 -62149098 - AluSx SINE Alu -18 294 1 257 308 89 7 chr17 23289494 23289640 -62148840 - MIR3 SINE MIR -16 192 35 270 189 38 42 chr17 23289767 23289865 -62148615 - MIR SINE MIR -58 150 81 216 135 0 0 chr17 23290095 23290132 -62148348 + (T)n Simple_repeat Simple_repeat 1 37 0 405 321 70 5 chr17 23290657 23290844 -62147636 - MIR SINE MIR -14 248 50 * 717 266 258 16 chr17 23290836 23291396 -62147084 - L2 LINE L2 -4 3309 2605 190 349 16 0 chr17 23291535 23291598 -62146882 - MIR SINE MIR -113 149 86 190 104 21 21 chr17 23291698 23291746 -62146734 + (TGGGGG)n Simple_repeat Simple_repeat 1 48 0 544 163 0 22 chr17 23291761 23291945 -62146535 + G-rich Low_complexity Low_complexity 1 180 0 186 222 0 0 chr17 23291969 23292023 -62146457 + G-rich Low_complexity Low_complexity 1 54 0 2010 130 7 3 chr17 23292140 23292447 -62146033 + AluSg SINE Alu 1 308 -2 353 327 60 24 chr17 23292459 23292710 -62145770 + L1MC4 LINE L1 7623 7882 -160 736 183 0 0 chr17 23292752 23292867 -62145613 - FLAM_C SINE Alu -18 115 1 2361 86 0 0 chr17 23292892 23293196 -62145284 + AluY SINE Alu 1 304 -7 237 180 49 33 chr17 23293420 23293481 -62144999 - MIR3 SINE MIR -46 162 101 317 269 55 0 chr17 23293607 23293731 -62144749 - MIR SINE MIR -63 145 43 237 256 144 0 chr17 23293749 23293839 -62144641 + MIR SINE MIR 16 118 -144 307 369 65 28 chr17 23294139 23294353 -62144127 + L2 LINE L2 2940 3161 -111 269 326 39 31 chr17 23294431 23294560 -62143920 + MIR SINE MIR 21 150 -112 2700 209 46 24 chr17 23294621 23295277 -62143203 - L1ME1 LINE L1 -5 6161 5488 2199 67 46 0 chr17 23295277 23295560 -62142920 - AluSg SINE Alu -14 296 1 2700 209 46 24 chr17 23295560 23295579 -62142901 - L1ME1 LINE L1 -678 5488 5471 1218 136 4 78 chr17 23295580 23295759 -62142721 - AluJo SINE Alu -3 309 151 2349 68 3 0 chr17 23295759 23296053 -62142427 - AluSx SINE Alu -17 295 1 1218 136 4 78 chr17 23296053 23296115 -62142365 - AluJo SINE Alu -161 151 86 608 227 31 43 chr17 23296115 23296372 -62142108 - L1ME1 LINE L1 -670 5492 5254 523 188 0 0 chr17 23296536 23296616 -62141864 + AluS SINE Alu 13 92 -220 2340 64 0 0 chr17 23296867 23297162 -62141318 - AluY SINE Alu -16 295 1 869 173 53 62 chr17 23297306 23297498 -62140982 - L1MD3 LINE L1 0 7995 7804 2262 100 0 13 chr17 23297498 23297807 -62140673 - AluSg SINE Alu -5 305 1 869 173 53 62 chr17 23297807 23297840 -62140640 - L1MD3 LINE L1 -191 7804 7772 1005 259 174 32 chr17 23297860 23298296 -62140184 + L1MC4a LINE L1 5436 5933 -1875 317 262 179 0 chr17 23298752 23298836 -62139644 + LTR33A LTR ERVL 59 157 -366 198 266 62 0 chr17 23299127 23299191 -62139289 - MIR SINE MIR -66 142 75 436 328 129 34 chr17 23299201 23299370 -62139110 + L2 LINE L2 2863 3015 -298 1765 183 0 0 chr17 23299370 23299665 -62138815 - AluJo SINE Alu -17 295 1 436 328 129 34 chr17 23299665 23299907 -62138573 + L2 LINE L2 3015 3313 0 376 296 61 109 chr17 23300321 23300477 -62138003 + MIR SINE MIR 9 152 -110 2013 112 7 0 chr17 23300477 23300762 -62137718 - AluSx SINE Alu -25 287 1 376 296 61 109 chr17 23300762 23300835 -62137645 + MIR SINE MIR 152 227 -35 241 272 97 10 chr17 23300840 23300943 -62137537 - MIR SINE MIR -58 204 93 523 92 0 13 chr17 23301172 23301248 -62137232 + Alu SINE Alu 1 75 -243 297 189 32 84 chr17 23301791 23301886 -62136594 + MIR SINE MIR 27 116 -146 184 284 91 11 chr17 23302000 23302088 -62136392 + L2 LINE L2 2634 2728 -586 882 44 0 26 chr17 23302158 23302272 -62136208 - L1PA6 LINE L1 0 6154 6044 1607 171 4 0 chr17 23302272 23302536 -62135944 - AluJo SINE Alu -20 292 28 277 306 45 9 chr17 23302540 23302651 -62135829 + L1ME1 LINE L1 6043 6157 -9 2063 145 0 0 chr17 23302652 23302955 -62135525 - AluSx SINE Alu -9 303 1 706 80 97 0 chr17 23303111 23303224 -62135256 - MER41B LTR ERV1 0 635 512 2175 102 0 7 chr17 23303224 23303528 -62134952 + AluSg SINE Alu 1 302 -8 1309 113 0 10 chr17 23303850 23304044 -62134436 + AluSg/x SINE Alu 121 312 0 2903 126 38 34 chr17 23304044 23304374 -62134106 - MER41B LTR ERV1 -126 509 175 2205 66 3 20 chr17 23304374 23304675 -62133805 - AluY SINE Alu -15 296 1 2903 126 38 34 chr17 23304675 23304851 -62133629 - MER41B LTR ERV1 -460 175 1 781 247 207 31 chr17 23304876 23305067 -62133413 + L2 LINE L2 2764 2920 -393 2221 98 3 0 chr17 23305067 23305364 -62133116 - AluSx SINE Alu -14 298 1 781 247 207 31 chr17 23305364 23305646 -62132834 + L2 LINE L2 2920 3308 -5 224 226 0 0 chr17 23306046 23306099 -62132381 - L2 LINE L2 -323 2949 2897 2227 55 21 7 chr17 23306107 23306397 -62132083 + AluY SINE Alu 6 299 -12 919 254 101 10 chr17 23306672 23307038 -62131442 + L1ME LINE L1 5237 5629 -535 793 239 17 11 chr17 23307040 23307216 -62131264 + AluJo SINE Alu 2 178 -134 544 172 11 0 chr17 23307210 23307303 -62131177 + AluJo/FRAM SINE Alu 137 230 -82 * 180 186 47 23 chr17 23307414 23307457 -62131023 - MIR SINE MIR -55 153 110 192 253 169 0 chr17 23308151 23308234 -62130246 - MIR SINE MIR -71 137 41 185 285 63 32 chr17 23308465 23308623 -62129857 - L2 LINE L2 -253 3060 2898 220 206 82 27 chr17 23309486 23309559 -62128921 + MIR SINE MIR 108 184 -78 547 258 101 0 chr17 23310009 23310210 -62128270 + L2 LINE L2 2767 2984 -329 918 181 0 7 chr17 23310332 23310487 -62127993 - AluJo/FRAM SINE Alu -22 290 137 2321 100 0 0 chr17 23310487 23310796 -62127684 - AluSq SINE Alu -4 309 1 398 308 31 25 chr17 23310797 23310956 -62127524 + L2 LINE L2 3151 3310 -3 281 223 157 57 chr17 23311327 23311496 -62126984 + MIR SINE MIR 11 195 -58 567 203 250 0 chr17 23311650 23311912 -62126568 + L2 LINE L2 2676 3016 -297 372 291 111 41 chr17 23311913 23312085 -62126395 + L2 LINE L2 3130 3313 0 205 267 0 0 chr17 23312085 23312130 -62126350 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 520 250 16 0 chr17 23312559 23312683 -62125797 - MIR SINE MIR -32 230 105 235 296 0 0 chr17 23315543 23315614 -62122866 + C-rich Low_complexity Low_complexity 1 71 0 259 229 288 0 chr17 23316209 23316327 -62122153 + MIR3 SINE MIR 32 183 -25 1972 114 35 0 chr17 23316400 23316689 -62121791 + AluSx SINE Alu 12 310 -2 2021 137 12 19 chr17 23317059 23317381 -62121099 - 7SLRNA srpRNA srpRNA 0 320 1 182 222 22 0 chr17 23317437 23317482 -62120998 - L2 LINE L2 -2 3270 3225 422 54 0 0 chr17 23317498 23317554 -62120926 - Alu SINE Alu -10 302 247 2449 64 0 3 chr17 23317841 23318152 -62120328 - AluY SINE Alu -1 310 1 483 216 48 128 chr17 23318686 23318773 -62119707 + MER113 DNA MER1_type? 62 154 -367 1857 158 0 0 chr17 23318773 23319065 -62119415 + AluJo SINE Alu 1 292 -20 483 216 48 128 chr17 23319065 23319227 -62119253 + MER113 DNA MER1_type? 154 291 -230 185 354 0 15 chr17 23319590 23319655 -62118825 + MIR SINE MIR 30 93 -115 377 241 23 0 chr17 23319658 23319745 -62118735 - L2 LINE L2 0 3313 3225 365 316 87 20 chr17 23319773 23319969 -62118511 - L2 LINE L2 -61 3252 3044 630 274 43 11 chr17 23319983 23320169 -62118311 + MLT1L LTR MaLR 347 538 -77 601 281 177 3 chr17 23320226 23320555 -62117925 - L2 LINE L2 -297 3016 2633 337 285 43 126 chr17 23320714 23320882 -62117598 + L2 LINE L2 2543 2681 -633 767 177 0 0 chr17 23320882 23321012 -62117468 - FLAM_C SINE Alu 0 133 4 337 285 43 126 chr17 23321012 23321120 -62117360 + L2 LINE L2 2681 2796 -518 308 310 29 29 chr17 23321121 23321292 -62117188 - MLT1J2 LTR MaLR 0 450 280 2344 99 0 0 chr17 23322396 23322689 -62115791 - AluSc SINE Alu -16 293 1 318 327 88 56 chr17 23322928 23323179 -62115301 - MLT1J2 LTR MaLR -1 449 191 248 329 120 6 chr17 23323317 23323484 -62114996 + L2 LINE L2 2807 2992 -280 299 207 0 0 chr17 23323486 23323544 -62114936 + (CCCA)n Simple_repeat Simple_repeat 3 60 0 839 204 8 4 chr17 23323545 23324082 -62114398 + (TCCA)n Simple_repeat Simple_repeat 1 539 0 236 286 0 0 chr17 23324083 23324139 -62114341 + (CCCA)n Simple_repeat Simple_repeat 2 57 0 803 192 6 0 chr17 23324140 23324317 -62114163 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1480 241 48 38 chr17 23324331 23324808 -62113672 - L2 LINE L2 -3 3310 2829 259 237 21 0 chr17 23325601 23325694 -62112786 + (TCCA)n Simple_repeat Simple_repeat 4 98 0 247 294 72 33 chr17 23326094 23326274 -62112206 + LTR33A LTR ERVL 335 521 -2 381 348 24 20 chr17 23326582 23326847 -62111633 + ERVL LTR ERVL 384 628 -5026 209 289 99 28 chr17 23327136 23327258 -62111222 + MIR SINE MIR 77 212 -50 2357 79 3 3 chr17 23327258 23327548 -62110932 + AluSx SINE Alu 1 290 -22 209 289 99 28 chr17 23327548 23327567 -62110913 + MIR SINE MIR 212 228 -34 1342 83 22 0 chr17 23329169 23329349 -62109131 + AluSg/x SINE Alu 115 298 -14 21 36 0 0 chr17 23330676 23330704 -62107776 + GC_rich Low_complexity Low_complexity 1 28 0 1133 155 5 10 chr17 23333491 23333691 -62104789 - MER3 DNA MER1_type -10 199 1 473 223 121 18 chr17 23335110 23335211 -62103269 + MER3 DNA MER1_type 1 90 -119 1892 160 3 7 chr17 23335211 23335517 -62102963 - AluJb SINE Alu -7 305 1 473 223 121 18 chr17 23335517 23335581 -62102899 + MER3 DNA MER1_type 90 183 -26 309 283 38 9 chr17 23335614 23335761 -62102719 - MIR SINE MIR -66 142 34 201 322 167 0 chr17 23336190 23336280 -62102200 - L2 LINE L2 -9 3304 3200 360 256 93 8 chr17 23336681 23336708 -62101772 - L1ME4a LINE L1 -2 6119 6096 2602 57 0 0 chr17 23336708 23337007 -62101473 + AluY SINE Alu 1 299 -12 360 256 93 8 chr17 23337007 23337095 -62101385 - L1ME4a LINE L1 -25 6096 5990 2327 101 3 0 chr17 23337095 23337393 -62101087 - AluSq SINE Alu -14 299 1 360 256 93 8 chr17 23337393 23337405 -62101075 - L1ME4a LINE L1 -131 5990 5980 2074 133 7 0 chr17 23337466 23337751 -62100729 - AluSx SINE Alu -25 287 1 1177 242 77 3 chr17 23337814 23338140 -62100340 + L1MB8 LINE L1 5825 6174 -4 1983 136 58 0 chr17 23338179 23338474 -62100006 + AluSq SINE Alu 1 312 -1 1951 159 20 3 chr17 23338482 23338784 -62099696 + AluSg SINE Alu 1 307 -3 3540 140 31 25 chr17 23338784 23339468 -62099012 + L1MB3 LINE L1 5496 6183 0 2394 107 3 0 chr17 23340541 23340849 -62097631 - AluSx SINE Alu -3 309 1 201 74 0 0 chr17 23340851 23340878 -62097602 + (T)n Simple_repeat Simple_repeat 1 27 0 210 71 0 0 chr17 23341022 23341050 -62097430 + (A)n Simple_repeat Simple_repeat 1 28 0 1893 132 73 0 chr17 23341277 23341566 -62096914 - AluSx SINE Alu -2 310 1 1795 122 20 56 chr17 23343068 23343372 -62095108 + AluJb SINE Alu 1 293 -19 2349 88 3 25 chr17 23345643 23345960 -62092520 - AluSg SINE Alu 0 310 1 1289 86 77 32 chr17 23347613 23347833 -62090647 + MER30 DNA MER1_type 1 230 0 1872 151 14 0 chr17 23347964 23348267 -62090213 - AluSx SINE Alu 0 307 1 1696 184 3 27 chr17 23349240 23349539 -62088941 + AluJb SINE Alu 1 292 -20 1704 122 118 0 chr17 23349539 23349801 -62088679 - AluSx SINE Alu -19 293 1 473 241 72 24 chr17 23350758 23350924 -62087556 - MER113 DNA MER1_type? -147 374 201 1025 113 19 50 chr17 23351140 23351300 -62087180 + AluSp SINE Alu 135 289 -24 2154 91 53 0 chr17 23351302 23351587 -62086893 + AluY SINE Alu 1 300 -11 392 113 0 0 chr17 23351591 23351644 -62086836 + Alu SINE Alu 1 53 -250 207 69 0 0 chr17 23351650 23351679 -62086801 + (A)n Simple_repeat Simple_repeat 1 29 0 2378 90 0 13 chr17 23352452 23352764 -62085716 + AluSg SINE Alu 1 308 -2 1936 162 7 0 chr17 23354818 23355114 -62083366 - AluJo SINE Alu -14 298 1 490 168 126 0 chr17 23356407 23356502 -62081978 - FLAM_A SINE Alu -35 107 1 797 144 97 166 chr17 23356526 23356846 -62081634 + L1MC4 LINE L1 7744 8041 -1 2352 60 3 26 chr17 23356850 23357186 -62081294 + AluY SINE Alu 1 311 0 441 226 0 0 chr17 23357292 23357438 -62081042 + G-rich Low_complexity Low_complexity 1 146 0 316 264 62 98 chr17 23357651 23357761 -62080719 - L1ME4a LINE L1 -49 6072 5960 2413 81 0 28 chr17 23357761 23358081 -62080399 - AluY SINE Alu 0 311 1 594 222 6 53 chr17 23358081 23358252 -62080228 - FRAM SINE Alu -2 164 2 316 264 62 98 chr17 23358252 23358333 -62080147 - L1ME4a LINE L1 -159 5962 5887 198 428 14 0 chr17 23359147 23359285 -62079195 - MIR SINE MIR -33 229 90 326 191 53 38 chr17 23359404 23359437 -62079043 - L1MC4 LINE L1 -31 8011 7980 2324 112 0 0 chr17 23359437 23359733 -62078747 + AluSq SINE Alu 1 296 -17 326 191 53 38 chr17 23359733 23359830 -62078650 - L1MC4 LINE L1 -62 7980 7879 215 331 24 48 chr17 23359898 23360022 -62078458 - MIR SINE MIR -98 164 44 296 283 140 49 chr17 23360286 23360598 -62077882 + L1MC4a LINE L1 5671 6015 -106 456 310 38 0 chr17 23360680 23360838 -62077642 - MIR SINE MIR -81 181 18 6325 196 108 68 chr17 23361909 23362736 -62075744 + L1M3 LINE L1 3044 3837 -2343 840 101 0 36 chr17 23362736 23362874 -62075606 + AluJo/FLAM SINE Alu 1 133 -169 2402 87 3 7 chr17 23362876 23363185 -62075295 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 23363185 23363737 -62074743 + L1M3 LINE L1 3837 4366 -1814 928 174 214 86 chr17 23363737 23364039 -62074441 + MSTD LTR MaLR 1 356 -40 1700 213 3 0 chr17 23364039 23364349 -62074131 + AluJo SINE Alu 1 311 -1 928 174 214 86 chr17 23364349 23364397 -62074083 + MSTD LTR MaLR 356 396 0 6325 196 108 68 chr17 23364397 23365052 -62073428 + L1M3 LINE L1 4366 4994 -1186 2265 119 0 3 chr17 23365052 23365355 -62073125 + AluSc SINE Alu 1 302 -7 2424 88 3 3 chr17 23365358 23365666 -62072814 + AluSp SINE Alu 1 308 -5 6325 196 108 68 chr17 23365666 23365811 -62072669 + L1M3 LINE L1 4995 5133 -1047 2099 130 3 13 chr17 23365811 23366110 -62072370 - AluSx SINE Alu -16 296 1 6325 196 108 68 chr17 23366110 23366213 -62072267 + L1M3 LINE L1 5133 5440 -740 1527 158 19 31 chr17 23366213 23366472 -62072008 + AluJo SINE Alu 42 297 -15 2185 105 21 0 chr17 23366482 23366767 -62071713 + AluSx SINE Alu 11 301 -11 266 226 0 0 chr17 23368016 23368078 -62070402 - MLT1K LTR MaLR -13 575 514 190 196 29 214 chr17 23368593 23368766 -62069714 + MIR SINE MIR 95 235 -27 1897 179 3 3 chr17 23368814 23369105 -62069375 - AluJo SINE Alu -21 291 1 1891 163 3 3 chr17 23369136 23369419 -62069061 + AluJo SINE Alu 1 283 -29 1722 139 53 7 chr17 23369586 23369867 -62068613 + AluJb SINE Alu 1 294 -18 1886 154 37 0 chr17 23369918 23370216 -62068264 - AluJb SINE Alu -3 309 1 186 224 35 17 chr17 23372550 23372608 -62065872 + MIR SINE MIR 174 232 -30 196 250 91 23 chr17 23372705 23372793 -62065687 + L2 LINE L2 3153 3246 -26 313 270 11 11 chr17 23373264 23373353 -62065127 + Charlie8 DNA MER1_type 34 122 -2295 231 36 0 0 chr17 23373407 23373435 -62065045 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 279 318 73 11 chr17 23376275 23376454 -62062026 + MIR SINE MIR 8 197 -65 1981 172 0 0 chr17 23377202 23377505 -62060975 + AluJb SINE Alu 1 303 -9 2147 95 49 0 chr17 23379936 23380221 -62058259 - AluSg SINE Alu -11 299 1 1644 158 68 4 chr17 23380250 23380529 -62057951 + AluJo SINE Alu 4 300 -12 284 212 15 30 chr17 23380854 23380920 -62057560 - MARNA DNA Mariner -387 199 135 384 266 46 17 chr17 23381029 23381202 -62057278 - L2 LINE L2 0 3313 3136 1955 142 0 10 chr17 23381544 23381840 -62056640 + AluJo SINE Alu 6 298 -14 1605 169 0 0 chr17 23381882 23382124 -62056356 + AluJb SINE Alu 1 242 -70 2371 83 6 13 chr17 23382643 23382957 -62055523 - AluSx SINE Alu 0 312 1 22 0 0 0 chr17 23382994 23383016 -62055464 + AT_rich Low_complexity Low_complexity 1 22 0 645 253 93 27 chr17 23384264 23384489 -62053991 - L1M4c LINE L1 -4594 1790 1551 5729 151 44 2 chr17 23384491 23385483 -62052997 - L1MC1 LINE L1 0 6613 5573 2247 96 0 26 chr17 23385485 23385797 -62052683 - AluSg SINE Alu -6 304 1 1048 111 7 0 chr17 23385797 23385932 -62052548 - AluSq/x SINE Alu -176 136 1 6233 223 73 63 chr17 23385936 23385986 -62052494 - L1MC1 LINE L1 -846 5580 5532 1693 166 42 7 chr17 23385986 23386270 -62052210 - AluJb SINE Alu -8 304 11 6233 223 73 63 chr17 23386270 23386316 -62052164 - L1MC1 LINE L1 -894 5532 5488 2338 94 0 28 chr17 23386316 23386634 -62051846 + AluSg SINE Alu 1 309 -1 6233 223 73 63 chr17 23386634 23387915 -62050565 - L1MC1 LINE L1 -938 5488 4220 1140 174 38 2 chr17 23387915 23388151 -62050329 - AluJb SINE Alu -19 293 1 6233 223 73 63 chr17 23388151 23388163 -62050317 - L1MC1 LINE L1 -2206 4220 4210 1608 191 17 7 chr17 23388163 23388456 -62050024 - AluJo SINE Alu -16 296 1 6233 223 73 63 chr17 23388456 23388941 -62049539 - L1MC1 LINE L1 -2216 4210 3731 2236 120 7 0 chr17 23388941 23389240 -62049240 - AluSq SINE Alu -12 301 1 2126 125 3 13 chr17 23389242 23389547 -62048933 - AluSx SINE Alu -10 302 1 6233 223 73 63 chr17 23389547 23391546 -62046934 - L1MC1 LINE L1 -2695 3731 1534 2120 127 0 7 chr17 23391546 23391845 -62046635 - AluSq SINE Alu -16 297 1 6233 223 73 63 chr17 23391845 23391970 -62046510 - L1MC1 LINE L1 -4892 1534 1412 1272 179 93 45 chr17 23391982 23392295 -62046185 + MLT1A1 LTR MaLR 1 328 -37 7228 149 42 34 chr17 23392307 23393376 -62045104 - L1MC1 LINE L1 -5034 1392 332 2278 157 45 29 chr17 23393376 23393416 -62045064 - MSTA LTR MaLR 0 428 390 1904 172 0 0 chr17 23393416 23393718 -62044762 + AluJb SINE Alu 1 302 -10 2278 157 45 29 chr17 23393718 23394098 -62044382 - MSTA LTR MaLR -38 390 1 7228 149 42 34 chr17 23394098 23394338 -62044142 - L1MC1 LINE L1 -6094 332 70 2214 97 3 32 chr17 23394338 23394646 -62043834 - AluSg1 SINE Alu -10 299 1 7228 149 42 34 chr17 23394646 23394700 -62043780 - L1MC1 LINE L1 -6356 70 18 651 213 52 30 chr17 23394711 23394905 -62043575 - L1M4c LINE L1 -4728 2229 1928 679 209 6 70 chr17 23394906 23395064 -62043416 + MLT1D LTR MaLR 1 148 -357 555 197 150 8 chr17 23395050 23395177 -62043303 + MLT1D LTR MaLR 341 485 -20 * 365 236 34 115 chr17 23395189 23395246 -62043234 - L1M4c LINE L1 -6655 204 144 2202 101 0 7 chr17 23395246 23395534 -62042946 - AluSx SINE Alu -24 288 3 365 236 34 115 chr17 23395534 23395684 -62042796 - L1M4c LINE L1 -6715 144 14 882 112 0 77 chr17 23395750 23395893 -62042587 - FLAM_C SINE Alu 0 133 2 4908 210 42 51 chr17 23395901 23397111 -62041369 - L1M1 LINE L1 -3957 3608 2412 2037 115 27 7 chr17 23397111 23397406 -62041074 - AluSx SINE Alu -11 301 1 4908 210 42 51 chr17 23397406 23397644 -62040836 - L1M1 LINE L1 -5153 2412 2173 817 189 0 0 chr17 23397656 23397788 -62040692 + FLAM_C SINE Alu 1 132 -11 672 197 0 23 chr17 23397799 23397931 -62040549 - AluJo SINE Alu -177 135 7 3298 160 42 0 chr17 23397964 23398490 -62039990 - L1M1 LINE L1 -4777 1788 1241 473 256 96 6 chr17 23399284 23399440 -62039040 + MIR SINE MIR 34 203 -59 1675 188 28 0 chr17 23399440 23399727 -62038753 - AluJb SINE Alu 0 312 18 2202 129 28 3 chr17 23399932 23400289 -62038191 - MER47A DNA MER2_type 0 366 1 2341 87 0 3 chr17 23400531 23400829 -62037651 - AluY SINE Alu -14 297 1 21 0 0 0 chr17 23401027 23401048 -62037432 + AT_rich Low_complexity Low_complexity 1 21 0 2178 122 0 0 chr17 23401048 23401336 -62037144 - AluSx SINE Alu -24 288 1 199 250 94 0 chr17 23401527 23401591 -62036889 + MIR SINE MIR 82 151 -57 1007 100 8 0 chr17 23402515 23402645 -62035835 + AluSq/x SINE Alu 6 136 -177 2186 123 7 0 chr17 23402645 23402946 -62035534 + AluSx SINE Alu 1 303 -9 226 181 403 0 chr17 23402971 23403043 -62035437 + MER4A LTR ERV1 1 101 -563 * 1605 115 7 147 chr17 23403042 23403374 -62035106 + MER4A LTR ERV1 263 590 -74 2774 143 50 23 chr17 23403374 23403851 -62034629 + LTR2B LTR ERV1 1 490 0 1605 115 7 147 chr17 23403851 23403917 -62034563 + MER4A LTR ERV1 590 664 0 2490 104 147 27 chr17 23403920 23404441 -62034039 + LTR2B-int LTR ERV1 1 628 -5970 5222 124 82 29 chr17 23404441 23405326 -62033154 + MER4A-int LTR ERV1 215 1146 -5612 540 0 0 0 chr17 23405332 23405392 -62033088 + (TG)n Simple_repeat Simple_repeat 2 61 0 2502 105 132 19 chr17 23405403 23405560 -62032920 + MER4A-int LTR ERV1 1798 1936 -4662 2220 82 41 0 chr17 23405560 23405852 -62032628 + AluY SINE Alu 1 304 -7 2502 105 132 19 chr17 23405852 23406172 -62032308 + MER4A-int LTR ERV1 1936 2329 -4269 2278 84 0 17 chr17 23406485 23406781 -62031699 - AluY SINE Alu -20 291 1 2070 133 3 0 chr17 23406787 23407088 -62031392 - AluSc SINE Alu -3 306 5 304 288 114 15 chr17 23407106 23407238 -62031242 - MIR SINE MIR -71 191 47 447 185 11 11 chr17 23407369 23407461 -62031019 - AluSp/q SINE Alu -10 303 212 1972 146 11 0 chr17 23407730 23408044 -62030436 + AluSx SINE Alu 1 317 0 1970 123 34 0 chr17 23408050 23408342 -62030138 + AluSx SINE Alu 1 302 -10 2503 41 7 10 chr17 23408479 23408774 -62029706 + AluY SINE Alu 1 294 -17 808 151 17 0 chr17 23408900 23409050 -62029430 + FRAM SINE Alu 26 177 0 373 174 14 0 chr17 23409064 23409133 -62029347 + LTR24B-int LTR ERV1 5054 5123 0 1333 222 47 102 chr17 23409133 23409329 -62029151 + LTR24B LTR ERV1 1 206 -370 2288 98 13 0 chr17 23409329 23409636 -62028844 - AluSp SINE Alu -2 311 1 1333 222 47 102 chr17 23409636 23409678 -62028802 + LTR24B LTR ERV1 206 249 -327 2109 146 0 0 chr17 23409678 23409986 -62028494 + AluJb SINE Alu 1 308 -4 1333 222 47 102 chr17 23409986 23410364 -62028116 + LTR24B LTR ERV1 249 576 0 280 275 38 69 chr17 23410681 23410841 -62027639 + MLT1I LTR MaLR 130 284 -125 2533 52 10 3 chr17 23410974 23411279 -62027201 - AluY SINE Alu -4 307 1 503 258 59 50 chr17 23411315 23411536 -62026944 - L1MC4a LINE L1 -1918 5890 5668 2153 168 33 32 chr17 23411536 23412086 -62026394 - MLT2A2 LTR ERVL 0 554 1 1266 228 53 41 chr17 23412365 23412707 -62025773 - MLT1I LTR MaLR 0 409 64 200 368 18 0 chr17 23412858 23412972 -62025508 + L2 LINE L2 2274 2389 -925 1705 163 3 39 chr17 23413144 23413451 -62025029 + AluJb SINE Alu 1 296 -16 180 0 0 0 chr17 23413453 23413473 -62025007 + (CA)n Simple_repeat Simple_repeat 2 21 0 1636 131 0 29 chr17 23414460 23414704 -62023776 + AluSx SINE Alu 38 274 -38 510 17 0 0 chr17 23414759 23414818 -62023662 + (TG)n Simple_repeat Simple_repeat 2 60 0 657 210 90 24 chr17 23415147 23415314 -62023166 + MER3 DNA MER1_type 28 205 -4 2040 121 3 13 chr17 23415521 23415826 -62022654 + AluSx SINE Alu 1 302 -10 777 272 48 41 chr17 23415987 23416159 -62022321 - L1MEc LINE L1 -4112 2149 1980 2032 137 3 3 chr17 23416159 23416451 -62022029 + AluJb SINE Alu 1 292 -20 777 272 48 41 chr17 23416451 23416694 -62021786 - L1MEc LINE L1 -4281 1980 1731 1149 291 106 39 chr17 23416706 23416784 -62021696 - L1MEc LINE L1 -4605 1656 1585 1723 155 69 0 chr17 23416784 23417074 -62021406 - AluSx SINE Alu -2 310 1 1149 291 106 39 chr17 23417074 23417261 -62021219 - L1MEc LINE L1 -4676 1585 1412 731 11 0 0 chr17 23417261 23417350 -62021130 - L1PB1 LINE L1 0 6151 6063 2225 96 3 35 chr17 23417354 23417668 -62020812 - AluSx SINE Alu -8 304 1 1149 291 106 39 chr17 23417668 23418141 -62020339 - L1MEc LINE L1 -4851 1410 862 1294 164 0 36 chr17 23418148 23418373 -62020107 - AluJb SINE Alu -11 301 85 925 124 0 0 chr17 23418375 23418504 -62019976 - AluJo/FLAM SINE Alu -173 129 1 1883 273 61 38 chr17 23418504 23418700 -62019780 - L1MEc LINE L1 -5242 828 638 2272 91 3 3 chr17 23418700 23418987 -62019493 + AluSp SINE Alu 1 287 -26 1883 273 61 38 chr17 23418987 23419581 -62018899 - L1MEc LINE L1 -5432 638 20 2455 50 3 0 chr17 23419741 23420024 -62018456 + AluY SINE Alu 1 308 0 184 42 0 0 chr17 23420024 23420048 -62018432 + (CAAAA)n Simple_repeat Simple_repeat 2 160 0 2084 139 0 0 chr17 23420254 23420541 -62017939 - AluSx SINE Alu -15 297 11 2049 91 65 7 chr17 23420545 23420820 -62017660 - AluY SINE Alu -20 291 1 31 0 0 0 chr17 23420820 23420851 -62017629 + AT_rich Low_complexity Low_complexity 1 31 0 676 268 36 27 chr17 23420927 23421151 -62017329 - MIR SINE MIR 0 262 37 1055 164 5 46 chr17 23421519 23421714 -62016766 - AluJb SINE Alu -44 268 82 294 272 48 13 chr17 23421714 23421898 -62016582 - L1MC/D LINE L1 -297 5824 5631 874 154 7 0 chr17 23422283 23422419 -62016061 - AluJb SINE Alu -16 296 160 730 244 49 125 chr17 23422443 23422527 -62015953 - L2 LINE L2 -26 3287 3198 2002 99 6 93 chr17 23422527 23422861 -62015619 + AluSx SINE Alu 1 305 -7 730 244 49 125 chr17 23422861 23423185 -62015295 - L2 LINE L2 -115 3198 2910 453 205 181 44 chr17 23423536 23423741 -62014739 + Charlie5 DNA MER1_type 2368 2600 -12 1942 106 14 0 chr17 23424480 23424762 -62013718 + AluSg SINE Alu 9 294 -16 260 238 32 16 chr17 23424890 23424953 -62013527 + CT-rich Low_complexity Low_complexity 4 67 0 1434 159 103 28 chr17 23425437 23425727 -62012753 - AluJo SINE Alu 0 312 1 283 167 100 17 chr17 23425771 23425831 -62012649 + AluJ/FRAM SINE Alu 226 290 -12 2038 98 51 4 chr17 23426078 23426354 -62012126 - AluSp SINE Alu -24 289 1 991 211 0 5 chr17 23426400 23426613 -62011867 + AluSc SINE Alu 2 213 -96 1289 114 6 0 chr17 23426973 23427148 -62011332 - AluSg/x SINE Alu 0 312 137 276 203 0 16 chr17 23427152 23427216 -62011264 + MLT1C LTR MaLR 405 467 0 230 276 9 29 chr17 23427527 23427632 -62010848 + L1MC5 LINE L1 7383 7485 -476 2115 132 0 3 chr17 23427736 23428031 -62010449 + AluSx SINE Alu 1 294 -18 537 192 165 50 chr17 23428166 23428427 -62010053 + pTR5 LTR ERV1 738 1028 -1410 4268 150 79 37 chr17 23428506 23429384 -62009096 + pTR5 LTR ERV1 1 2438 0 342 236 69 56 chr17 23429391 23429513 -62008967 + L1MDa LINE L1 1774 1900 -4640 2126 140 0 13 chr17 23429513 23429821 -62008659 - AluSx SINE Alu -8 304 1 342 236 69 56 chr17 23429821 23429842 -62008638 + L1MDa LINE L1 1900 1919 -4621 2181 129 3 0 chr17 23429859 23430153 -62008327 + AluSx SINE Alu 1 295 -17 29 47 0 0 chr17 23430164 23430207 -62008273 + AT_rich Low_complexity Low_complexity 1 43 0 353 330 26 0 chr17 23430212 23430327 -62008153 + L1MDa LINE L1 1948 2065 -4475 662 162 0 0 chr17 23430334 23430433 -62008047 + AluJ/FLAM SINE Alu 2 100 -212 1461 185 0 23 chr17 23430434 23430693 -62007787 + AluJb SINE Alu 41 293 -19 832 228 114 43 chr17 23430697 23430850 -62007630 + L1M4 LINE L1 4739 4880 -1266 1550 161 77 32 chr17 23430850 23431135 -62007345 + AluJb SINE Alu 1 298 -14 2192 111 7 0 chr17 23431137 23431425 -62007055 + AluSq SINE Alu 3 292 -21 832 228 114 43 chr17 23431425 23431751 -62006729 + L1M4 LINE L1 4880 5255 -891 2114 117 19 64 chr17 23431753 23432315 -62006165 - MER51A LTR ERV1 0 634 1 3880 146 27 19 chr17 23432315 23433295 -62005185 - L1M2 LINE L1 -647 5644 4663 2235 100 0 27 chr17 23433295 23433595 -62004885 - AluSq SINE Alu -18 295 4 3880 146 27 19 chr17 23433595 23433648 -62004832 - L1M2 LINE L1 -1628 4663 4612 2754 156 55 6 chr17 23433648 23434135 -62004345 + MER9 LTR ERVK 1 511 0 11632 130 41 42 chr17 23434135 23435142 -62003338 + HERVK9 LTR ERVK 1 1008 -4937 188 228 0 88 chr17 23435142 23435199 -62003281 + MER5B DNA MER1_type 58 109 -69 11632 130 41 42 chr17 23435199 23436392 -62002088 + HERVK9 LTR ERVK 1008 2253 -3692 1719 188 88 21 chr17 23436438 23436869 -62001611 - MLT1C LTR MaLR -7 460 1 830 187 39 7 chr17 23437104 23437259 -62001221 - AluJb SINE Alu -11 301 142 2395 191 18 107 chr17 23437482 23438136 -62000344 - MER77 LTR ERV1 -9 596 1 346 286 40 0 chr17 23438337 23438463 -62000017 + L2 LINE L2 2887 3017 -296 261 176 12 106 chr17 23438791 23438876 -61999604 + MLT1J LTR MaLR 1 77 -434 2145 107 3 30 chr17 23438965 23439263 -61999217 + AluSp SINE Alu 1 290 -23 525 177 8 15 chr17 23439268 23439398 -61999082 + GA-rich Low_complexity Low_complexity 4 132 0 553 197 24 0 chr17 23439422 23439549 -61998931 + MLT1J-int LTR MaLR 1242 1371 0 334 166 0 2 chr17 23439586 23439650 -61998830 + MLT1D LTR MaLR 400 500 -5 1518 250 37 21 chr17 23439720 23440156 -61998324 - LTR47B LTR ERVL 0 443 1 2151 102 0 36 chr17 23440195 23440500 -61997980 + AluSg SINE Alu 1 294 -16 1948 161 0 3 chr17 23440577 23440869 -61997611 + AluJo SINE Alu 1 291 -21 351 288 0 52 chr17 23440882 23441035 -61997445 + MLT1J LTR MaLR 115 259 -252 237 216 16 112 chr17 23441115 23441240 -61997240 + MLT1J LTR MaLR 392 504 -7 415 250 155 0 chr17 23441540 23441688 -61996792 - MER112 DNA MER1_type -9 251 81 667 202 91 66 chr17 23441689 23441895 -61996585 - MER2 DNA MER2_type 0 345 130 2060 116 3 11 chr17 23441895 23442213 -61996267 + AluSx SINE Alu 1 316 0 667 202 91 66 chr17 23442213 23442248 -61996232 - MER2 DNA MER2_type -215 130 97 240 242 170 52 chr17 23442458 23442611 -61995869 - MIR3 SINE MIR -20 188 18 1210 202 131 18 chr17 23443025 23443361 -61995119 - MLT1D LTR MaLR -7 498 125 285 203 51 0 chr17 23443388 23443447 -61995033 - MLT1D LTR MaLR -442 63 2 1702 164 6 53 chr17 23443585 23443908 -61994572 + AluJo SINE Alu 2 309 -3 705 223 159 116 chr17 23444187 23444491 -61993989 - L2 LINE L2 -185 3128 2838 393 22 0 0 chr17 23444491 23444537 -61993943 + (TG)n Simple_repeat Simple_repeat 1 46 0 705 223 159 116 chr17 23444537 23444578 -61993902 - L2 LINE L2 -475 2838 2800 2335 96 0 3 chr17 23444578 23444879 -61993601 - AluSg SINE Alu -10 300 1 705 223 159 116 chr17 23444879 23444915 -61993565 - L2 LINE L2 -513 2800 2767 2294 147 75 14 chr17 23444915 23445320 -61993160 - L1MB5 LINE L1 0 6174 5742 2415 77 3 0 chr17 23445320 23445618 -61992862 - AluSp SINE Alu -14 299 1 705 223 159 116 chr17 23445628 23445843 -61992637 - L2 LINE L2 -546 2767 2500 248 314 14 0 chr17 23446798 23446868 -61991612 + MIR SINE MIR 82 152 -110 180 346 0 0 chr17 23446888 23446940 -61991540 + L2 LINE L2 3239 3290 -23 1500 199 26 24 chr17 23447050 23447491 -61990989 + LTR2B LTR ERV1 1 490 0 766 190 95 71 chr17 23447503 23447528 -61990952 - MIR SINE MIR -26 236 213 1939 144 10 19 chr17 23447528 23447841 -61990639 - AluSx SINE Alu 0 312 3 766 190 95 71 chr17 23447841 23448026 -61990454 - MIR SINE MIR -49 213 21 287 100 0 0 chr17 23448026 23448093 -61990387 - Alu SINE Alu 0 300 234 2040 124 0 0 chr17 23448093 23448366 -61990114 - AluSx SINE Alu -26 286 14 293 331 31 16 chr17 23448751 23448878 -61989602 + MIR SINE MIR 84 212 -50 2136 123 0 0 chr17 23448893 23449209 -61989271 + AluSq SINE Alu 1 316 0 2312 108 0 0 chr17 23449370 23449665 -61988815 + AluSg SINE Alu 1 295 -15 424 225 268 0 chr17 23449928 23450070 -61988410 + MER5A DNA MER1_type 4 183 -6 432 249 41 45 chr17 23450078 23450299 -61988181 + LTR37B LTR ERV1 249 468 0 372 286 14 34 chr17 23450382 23450529 -61987951 + LTR67 LTR ERVL 23 166 -391 612 175 0 18 chr17 23450645 23450759 -61987721 - FLAM_C SINE Alu 0 143 32 292 200 31 0 chr17 23450760 23450825 -61987655 + MER52A LTR ERV1 1 67 -1688 7958 176 66 42 chr17 23451306 23452955 -61985525 + MER52A LTR ERV1 68 1755 0 1096 141 0 0 chr17 23453018 23453231 -61985249 - AluSg/x SINE Alu 0 346 134 2221 92 0 4 chr17 23453231 23453512 -61984968 - AluSc SINE Alu -20 289 10 1241 120 0 6 chr17 23453512 23453679 -61984801 - AluSx SINE Alu -146 166 1 1301 180 16 8 chr17 23454313 23454558 -61983922 + AluJo SINE Alu 64 310 -2 599 316 42 81 chr17 23454579 23455009 -61983471 + L1MC4 LINE L1 7628 8040 -2 1042 224 138 26 chr17 23455043 23455426 -61983054 + LTR42 LTR ERVL 1 426 -69 2469 58 0 3 chr17 23455644 23455936 -61982544 + AluY SINE Alu 1 291 -20 215 256 55 30 chr17 23456236 23456400 -61982080 + (CCCCAG)n Simple_repeat Simple_repeat 1 168 0 377 278 4 34 chr17 23456664 23456922 -61981558 + G-rich Low_complexity Low_complexity 1 250 0 27 0 0 0 chr17 23457176 23457203 -61981277 + GC_rich Low_complexity Low_complexity 1 27 0 2207 126 0 7 chr17 23457590 23457892 -61980588 - AluSx SINE Alu -12 300 1 1244 147 119 162 chr17 23458045 23458163 -61980317 - LTR65 LTR ERV1 -14 655 533 2256 58 25 0 chr17 23458163 23458468 -61980012 - AluY SINE Alu 0 312 1 1244 147 119 162 chr17 23458468 23458675 -61979805 - LTR65 LTR ERV1 -136 533 355 2000 85 0 0 chr17 23458675 23458954 -61979526 - AluY SINE Alu 0 314 36 1244 147 119 162 chr17 23458954 23459130 -61979350 - LTR65 LTR ERV1 -314 355 173 2128 111 24 0 chr17 23459721 23460010 -61978470 - AluSx SINE Alu -16 296 1 2432 63 0 23 chr17 23460384 23460687 -61977793 + AluY SINE Alu 1 296 -15 2429 82 3 0 chr17 23460700 23460994 -61977486 + AluSp SINE Alu 1 295 -18 713 186 0 7 chr17 23460997 23461137 -61977343 + MER3 DNA MER1_type 31 122 -87 291 162 73 0 chr17 23461145 23461213 -61977267 + MER3 DNA MER1_type 2234 2306 0 1528 254 30 98 chr17 23461276 23462054 -61976426 - L1MEc LINE L1 -5368 1028 304 343 238 36 0 chr17 23462080 23462164 -61976316 + MER81 DNA DNA 2 88 -26 2355 87 3 0 chr17 23462300 23462588 -61975892 - AluSg SINE Alu -21 289 1 1137 107 17 0 chr17 23462588 23462766 -61975714 + MER4A-int LTR ERV1 2315 2495 -4103 1214 145 107 8 chr17 23462766 23463000 -61975480 - LTR8 LTR ERV1 -434 257 1 2617 88 68 53 chr17 23463000 23463460 -61975020 + MER4A-int LTR ERV1 2737 3208 -3390 2339 89 0 22 chr17 23463460 23463773 -61974707 + AluY SINE Alu 2 307 -4 2617 88 68 53 chr17 23463773 23463844 -61974636 + MER4A-int LTR ERV1 3208 3276 -3322 279 0 0 0 chr17 23463849 23463880 -61974600 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 31 0 0 chr17 23463880 23463906 -61974574 + (TA)n Simple_repeat Simple_repeat 2 27 0 890 111 0 0 chr17 23463973 23464090 -61974390 + AluY SINE Alu 24 140 -171 2155 97 32 32 chr17 23464091 23464225 -61974255 + AluY SINE Alu 1 134 -177 2387 91 3 0 chr17 23464225 23464521 -61973959 + AluSp SINE Alu 1 297 -16 2155 97 32 32 chr17 23464521 23464695 -61973785 + AluY SINE Alu 133 309 -2 2049 143 0 28 chr17 23464702 23465023 -61973457 + AluSx SINE Alu 1 312 0 2178 112 0 14 chr17 23465126 23465441 -61973039 + AluSx SINE Alu 1 311 0 809 110 18 0 chr17 23465451 23465560 -61972920 - AluSp/q SINE Alu -10 303 193 15431 88 69 21 chr17 23465564 23465664 -61972816 + MER4A-int LTR ERV1 3987 4081 -2517 2341 96 7 10 chr17 23465664 23465965 -61972515 - AluSq SINE Alu -13 300 1 15431 88 69 21 chr17 23465965 23468354 -61970126 + MER4A-int LTR ERV1 4081 6596 -2 281 97 375 14 chr17 23468362 23468434 -61970046 + MER4A LTR ERV1 1 98 -566 1844 132 3 41 chr17 23468434 23468792 -61969688 + MER4A LTR ERV1 261 664 0 546 324 124 9 chr17 23468829 23469054 -61969426 - MIR SINE MIR 0 262 12 1881 149 28 101 chr17 23469172 23469421 -61969059 + MER57A LTR ERV1 1 208 -195 1945 155 13 7 chr17 23469421 23469600 -61968880 - AluJo SINE Alu 0 312 129 198 91 0 0 chr17 23469600 23469633 -61968847 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 1945 155 13 7 chr17 23469633 23469763 -61968717 - AluJo SINE Alu -183 129 1 1881 149 28 101 chr17 23469763 23469937 -61968543 + MER57A LTR ERV1 208 393 -10 4477 112 8 0 chr17 23470280 23470904 -61967576 + MER41B LTR ERV1 7 635 0 1515 176 73 147 chr17 23471285 23471563 -61966917 + MER67C LTR ERV1 8 305 -405 2003 94 33 0 chr17 23471563 23471866 -61966614 - AluSx SINE Alu 0 312 1 1515 176 73 147 chr17 23471866 23472245 -61966235 + MER67C LTR ERV1 305 617 -93 1840 162 3 0 chr17 23472247 23472550 -61965930 - AluJo SINE Alu 0 312 9 839 298 70 31 chr17 23472585 23472971 -61965509 + L2 LINE L2 2912 3312 -1 248 0 0 30 chr17 23473038 23473071 -61965409 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2331 58 0 22 chr17 23473087 23473261 -61965219 - AluSq SINE Alu -9 304 139 2133 85 3 10 chr17 23473261 23473566 -61964914 - AluY SINE Alu -8 303 1 2331 58 0 22 chr17 23473566 23473702 -61964778 - AluSq SINE Alu -174 139 1 816 176 14 7 chr17 23473703 23473851 -61964629 - AluJb SINE Alu -31 281 133 502 247 88 6 chr17 23473851 23474021 -61964459 + MIR SINE MIR 79 262 0 643 285 61 11 chr17 23474262 23474504 -61963976 - MIR SINE MIR -8 254 6 1003 283 99 11 chr17 23475240 23475787 -61962693 + L1M4 LINE L1 4698 5292 -854 242 240 77 67 chr17 23475951 23476159 -61962321 - L1MC4a LINE L1 -1746 6062 5853 24 32 0 0 chr17 23476191 23476222 -61962258 + AT_rich Low_complexity Low_complexity 1 31 0 2248 103 4 1 chr17 23476342 23476814 -61961666 + MER51A LTR ERV1 1 634 0 1940 123 10 7 chr17 23477034 23477335 -61961145 + AluSx SINE Alu 1 302 -10 2658 203 92 36 chr17 23477372 23477867 -61960613 + L1MC/D LINE L1 2 542 -5998 2299 90 0 3 chr17 23477867 23478177 -61960303 - AluSc SINE Alu 0 309 1 2658 203 92 36 chr17 23478177 23478320 -61960160 + L1MC/D LINE L1 542 676 -5864 1235 267 59 32 chr17 23478344 23478752 -61959728 - LTR47B LTR ERVL -24 419 1 1601 202 156 3 chr17 23478752 23479143 -61959337 + L1MC/D LINE L1 676 1126 -5414 2291 99 3 0 chr17 23479144 23479456 -61959024 + AluSp SINE Alu 1 313 0 488 219 0 0 chr17 23479480 23479576 -61958904 + AluJ/FLAM SINE Alu 1 96 -216 1338 160 0 61 chr17 23479858 23480152 -61958328 + AluJo SINE Alu 27 302 -10 2821 206 44 61 chr17 23480152 23480320 -61958160 + L1MC/D LINE L1 4715 4884 -1656 1546 156 52 21 chr17 23480320 23480608 -61957872 + AluJb SINE Alu 1 297 -15 2821 206 44 61 chr17 23480608 23480860 -61957620 + L1MC/D LINE L1 4884 5139 -1401 1755 168 0 10 chr17 23480860 23481164 -61957316 - AluJo SINE Alu -11 301 1 2821 206 44 61 chr17 23481164 23481720 -61956760 + L1MC/D LINE L1 5139 5675 -865 816 142 0 17 chr17 23481721 23481841 -61956639 + FLAM_C SINE Alu 1 118 -25 954 164 10 39 chr17 23481856 23482063 -61956417 + L1MC/D LINE L1 5666 5866 -887 1753 142 7 23 chr17 23482870 23483173 -61955307 + AluSx SINE Alu 1 298 -14 297 167 0 0 chr17 23483273 23483327 -61955153 + A-rich Low_complexity Low_complexity 1 54 0 372 174 6 180 chr17 23483338 23483505 -61954975 - MLT1B LTR MaLR -73 317 180 333 256 12 0 chr17 23483558 23483640 -61954840 - MLT1-int LTR MaLR -660 711 629 21 0 0 0 chr17 23483641 23483662 -61954818 + AT_rich Low_complexity Low_complexity 1 21 0 1705 174 0 7 chr17 23483670 23483964 -61954516 + AluJb SINE Alu 1 292 -20 1028 160 105 0 chr17 23483978 23484159 -61954321 - MER51A LTR ERV1 -434 200 1 238 187 42 18 chr17 23484159 23484242 -61954238 + L1ME2 LINE L1 5254 5335 -811 1463 112 48 64 chr17 23484244 23484347 -61954133 + L1MA8 LINE L1 5846 5949 -342 1867 151 3 3 chr17 23484347 23484646 -61953834 + AluJb SINE Alu 1 299 -13 1463 112 48 64 chr17 23484646 23484837 -61953643 + L1MA8 LINE L1 5949 6135 -156 913 223 73 51 chr17 23484808 23485082 -61953398 + L1ME2 LINE L1 5310 5589 -575 * 681 99 0 0 chr17 23485099 23485200 -61953280 - AluSg/x SINE Alu -1 311 211 1797 224 37 20 chr17 23485200 23485659 -61952821 + L1ME2 LINE L1 5582 6048 -116 794 232 16 4 chr17 23485768 23486022 -61952458 - L1M4c LINE L1 -4033 2351 2095 799 302 47 4 chr17 23486035 23486290 -61952190 + ERVL LTR ERVL 5166 5431 -333 48 0 0 0 chr17 23486730 23486778 -61951702 + AT_rich Low_complexity Low_complexity 1 48 0 426 129 0 0 chr17 23486778 23486840 -61951640 - AluS SINE Alu -255 63 2 203 146 24 0 chr17 23487271 23487312 -61951168 + T-rich Low_complexity Low_complexity 2 43 0 43 56 0 0 chr17 23487511 23487582 -61950898 + AT_rich Low_complexity Low_complexity 1 71 0 2016 135 13 0 chr17 23487607 23487910 -61950570 + AluJo SINE Alu 1 307 -5 1981 113 17 3 chr17 23487911 23488203 -61950277 + AluSx SINE Alu 1 296 -16 1916 121 0 56 chr17 23488523 23488695 -61949785 - AluSx SINE Alu -8 304 157 2319 74 3 0 chr17 23488695 23488993 -61949487 - AluSq SINE Alu -14 299 1 1916 121 0 56 chr17 23488993 23489142 -61949338 - AluSx SINE Alu -155 157 1 264 284 199 14 chr17 23489148 23489289 -61949191 - MIR SINE MIR -56 206 40 214 283 0 0 chr17 23489320 23489366 -61949114 - MIR SINE MIR -5 257 212 249 33 0 0 chr17 23489379 23489409 -61949071 + (TCCA)n Simple_repeat Simple_repeat 4 33 0 1214 153 12 68 chr17 23489412 23489661 -61948819 - Tigger2 DNA MER2_type 0 2718 2484 1188 126 0 0 chr17 23489662 23489837 -61948643 + AluJb SINE Alu 137 311 -1 778 87 117 152 chr17 23489838 23489864 -61948616 - Tigger2 DNA MER2_type -205 2513 2488 1916 139 7 0 chr17 23489864 23490165 -61948315 + AluJb SINE Alu 1 303 -9 778 87 117 152 chr17 23490165 23490368 -61948112 - Tigger2 DNA MER2_type -230 2488 2292 362 190 0 0 chr17 23490378 23490436 -61948044 + MER8 DNA MER2_type 182 239 0 205 97 0 0 chr17 23490444 23490475 -61948005 - MIR SINE MIR -73 189 159 1665 183 0 3 chr17 23490555 23490866 -61947614 + AluJo SINE Alu 1 310 -2 2187 94 10 13 chr17 23491085 23491393 -61947087 - AluY SINE Alu -4 307 1 310 195 103 23 chr17 23491489 23491576 -61946904 - MIR SINE MIR -104 158 65 434 296 30 86 chr17 23491761 23491994 -61946486 - L2 LINE L2 -46 3226 3007 1321 191 39 48 chr17 23492032 23492341 -61946139 + AluJo SINE Alu 1 306 -6 2052 130 7 0 chr17 23492341 23492649 -61945831 + AluSx SINE Alu 1 310 -2 1232 238 194 39 chr17 23492705 23493196 -61945284 - MLT1G1 LTR MaLR -28 567 1 2344 75 0 10 chr17 23493395 23493702 -61944778 - AluY SINE Alu -7 304 1 243 224 45 0 chr17 23494023 23494090 -61944390 - MIR SINE MIR -44 218 149 1373 94 35 0 chr17 23494092 23494295 -61944185 - AluSg/x SINE Alu -17 295 86 470 259 107 8 chr17 23494297 23494428 -61944052 - MIR SINE MIR -112 150 7 247 286 71 0 chr17 23494587 23494616 -61943864 - L1ME3 LINE L1 -1 6161 6135 2053 105 0 0 chr17 23494616 23494901 -61943579 + AluSx SINE Alu 12 296 -16 247 286 71 0 chr17 23494901 23494969 -61943511 - L1ME3 LINE L1 -27 6135 6057 * 504 164 170 18 chr17 23494965 23495130 -61943350 + L1ME3 LINE L1 5853 6042 -120 201 147 0 0 chr17 23495364 23495398 -61943082 + (T)n Simple_repeat Simple_repeat 1 34 0 2210 79 6 29 chr17 23496051 23496366 -61942114 - AluSg SINE Alu -2 308 1 949 78 39 0 chr17 23496370 23496498 -61941982 - AluSq/x SINE Alu -180 133 1 2210 87 17 0 chr17 23497055 23497354 -61941126 - AluSp SINE Alu -9 304 1 1727 97 27 85 chr17 23497375 23497706 -61940774 - AluSx SINE Alu 0 312 1 2182 51 0 0 chr17 23497712 23497986 -61940494 - AluY SINE Alu -8 303 30 2413 145 20 2 chr17 23498223 23498617 -61939863 - MER57A LTR ERV1 -2 401 1 1895 135 0 0 chr17 23498818 23499129 -61939351 + AluSx SINE Alu 1 311 0 1558 162 48 14 chr17 23499157 23499447 -61939033 + AluJo SINE Alu 1 300 -12 2318 72 0 26 chr17 23499449 23499756 -61938724 + AluY SINE Alu 1 299 -12 2139 70 3 30 chr17 23499757 23500056 -61938424 + AluY SINE Alu 1 291 -20 2192 87 3 0 chr17 23500427 23500713 -61937767 + AluSx SINE Alu 5 291 -21 23 0 0 0 chr17 23500713 23500736 -61937744 + AT_rich Low_complexity Low_complexity 1 23 0 2400 192 99 48 chr17 23500809 23501414 -61937066 + LTR27 LTR ERV1 1 636 0 2815 92 12 12 chr17 23501419 23501823 -61936657 - MER4A LTR ERV1 0 664 261 677 111 0 10 chr17 23501823 23501922 -61936558 - MER4A LTR ERV1 -566 98 1 2120 60 63 7 chr17 23502068 23502352 -61936128 - AluY SINE Alu -11 300 1 4741 132 74 46 chr17 23502365 23502930 -61935550 - MER4D LTR ERV1 0 903 356 1916 116 53 0 chr17 23502930 23503214 -61935266 - AluSx SINE Alu -12 300 2 4741 132 74 46 chr17 23503214 23503491 -61934989 - MER4D LTR ERV1 -547 356 33 8210 50 16 10 chr17 23503491 23504492 -61933988 - LTR13 LTR ERVK 0 1007 1 4741 132 74 46 chr17 23504492 23504526 -61933954 - MER4D LTR ERV1 -870 33 1 5047 115 34 4 chr17 23504586 23505341 -61933139 + MER4E LTR ERV1 1 778 -1 435 324 24 19 chr17 23505343 23505550 -61932930 + PABL_B-int LTR ERV1 6419 6626 -496 1296 140 63 14 chr17 23505554 23505775 -61932705 + MER4D LTR ERV1 1 232 -671 1050 55 11 44 chr17 23505875 23506057 -61932423 + AluSg/x SINE Alu 124 299 -13 1874 136 13 0 chr17 23506316 23506624 -61931856 - AluJb SINE Alu 0 312 1 27 0 0 0 chr17 23506755 23506782 -61931698 + AT_rich Low_complexity Low_complexity 1 27 0 515 151 47 0 chr17 23506782 23506868 -61931612 - FLAM_C SINE Alu -26 117 28 891 155 53 71 chr17 23507032 23507258 -61931222 - L1MD2 LINE L1 -10 6349 6128 * 6811 221 69 11 chr17 23507256 23508956 -61929524 - L1MC3 LINE L1 -167 7618 5825 2501 52 0 3 chr17 23508956 23509263 -61929217 - AluY SINE Alu -5 306 1 6811 221 69 11 chr17 23509263 23509311 -61929169 - L1MC3 LINE L1 -1960 5825 5781 360 201 19 115 chr17 23509311 23509520 -61928960 - L1MC5 LINE L1 -431 7530 7342 463 198 9 66 chr17 23510004 23510110 -61928370 - Tigger7 DNA MER2_type -1 2490 2391 * 2405 182 53 18 chr17 23510100 23510594 -61927886 - Tigger7 DNA MER2_type -222 511 1 2119 92 7 3 chr17 23510963 23511258 -61927222 + AluSx SINE Alu 1 296 -16 1837 122 58 0 chr17 23512059 23512354 -61926126 - AluJb SINE Alu 0 312 1 400 208 50 10 chr17 23512425 23512526 -61925954 - MLT1C LTR MaLR -15 452 348 1916 169 21 12 chr17 23512685 23513022 -61925458 - MER7A DNA MER2_type -7 339 2 436 286 101 14 chr17 23513602 23513867 -61924613 - L1ME3 LINE L1 -267 5895 5592 1262 249 166 26 chr17 23513882 23514569 -61923911 - L1MC4 LINE L1 -2 8040 7258 309 109 0 0 chr17 23514597 23514643 -61923837 + (CATA)n Simple_repeat Simple_repeat 1 46 0 1902 165 32 0 chr17 23514650 23514965 -61923515 - MER2 DNA MER2_type -20 325 1 365 264 31 39 chr17 23514983 23515112 -61923368 - L1MB5 LINE L1 0 6174 6047 1199 225 31 17 chr17 23515116 23515409 -61923071 - L1MB5 LINE L1 -166 6008 5712 492 225 43 22 chr17 23515421 23515559 -61922921 - L1MC4 LINE L1 -800 7242 7102 1955 129 7 3 chr17 23517030 23517325 -61921155 - AluSx SINE Alu -16 296 1 1577 119 15 128 chr17 23517701 23517918 -61920562 - AluJo SINE Alu -1 301 134 1990 86 31 14 chr17 23517918 23518208 -61920272 + AluSc SINE Alu 1 295 -14 1577 119 15 128 chr17 23518208 23518327 -61920153 - AluJo SINE Alu -168 134 3 1564 168 39 11 chr17 23518399 23518684 -61919796 + AluJb SINE Alu 12 304 -8 1826 89 8 0 chr17 23518787 23519034 -61919446 - AluSx SINE Alu -63 249 1 3017 197 65 41 chr17 23519036 23520027 -61918453 - L1MB5 LINE L1 -35 6139 5115 1791 150 3 10 chr17 23520027 23520327 -61918153 - AluJb SINE Alu -14 298 1 3017 197 65 41 chr17 23520327 23520585 -61917895 - L1MB5 LINE L1 -1059 5115 4865 439 332 27 11 chr17 23521100 23521287 -61917193 - MIR SINE MIR -52 210 21 1845 136 31 3 chr17 23521345 23521639 -61916841 - AluJb SINE Alu -8 304 3 3033 129 19 25 chr17 23521665 23522178 -61916302 - L1PA13 LINE L1 -7 6156 5647 2381 71 0 0 chr17 23522198 23522492 -61915988 - AluY SINE Alu -15 296 3 189 0 0 0 chr17 23522609 23522630 -61915850 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1902 153 3 3 chr17 23522886 23523194 -61915286 - AluSx SINE Alu -4 308 1 273 57 0 0 chr17 23524731 23524766 -61913714 + (T)n Simple_repeat Simple_repeat 1 35 0 183 357 62 0 chr17 23526056 23526168 -61912312 - L2 LINE L2 -10 3262 3144 1597 157 68 0 chr17 23526295 23526576 -61911904 - AluJb SINE Alu -12 300 1 520 275 13 27 chr17 23527776 23527925 -61910555 + MER58B DNA MER1_type 195 341 0 1086 307 60 16 chr17 23528088 23528534 -61909946 - L1ME1 LINE L1 -6 6160 5695 518 259 130 0 chr17 23529987 23530149 -61908331 - MER5A DNA MER1_type -2 187 5 2244 60 4 0 chr17 23530912 23531217 -61907263 - AluY SINE Alu 0 306 1 842 149 0 8 chr17 23532734 23532868 -61905612 - FLAM_A SINE Alu 0 133 1 1820 126 65 0 chr17 23534329 23534607 -61903873 - AluSx SINE Alu -13 299 4 880 132 0 111 chr17 23534831 23535020 -61903460 - FRAM SINE Alu -15 161 1 2116 118 0 13 chr17 23535024 23535337 -61903143 - AluSx SINE Alu -3 309 1 2183 114 3 3 chr17 23535893 23536201 -61902279 - AluSp SINE Alu -5 308 1 551 268 95 0 chr17 23536212 23536380 -61902100 - L1MD1 LINE L1 0 6242 6059 1213 236 62 21 chr17 23536383 23536769 -61901711 - L1MD1 LINE L1 -232 6010 5609 464 226 97 77 chr17 23537488 23537643 -61900837 - MER58C DNA MER1_type 0 215 58 2272 88 0 0 chr17 23538207 23538502 -61899978 + AluSc SINE Alu 1 295 -14 765 243 205 35 chr17 23538826 23539230 -61899250 - MLT1D LTR MaLR -6 499 27 2140 117 7 0 chr17 23541078 23541385 -61897095 - AluSq SINE Alu -4 309 1 653 253 269 0 chr17 23543373 23543622 -61894858 - MER58B DNA MER1_type 0 341 26 1935 100 75 0 chr17 23543943 23544224 -61894256 - AluSq SINE Alu -11 302 1 431 349 33 19 chr17 23546128 23546340 -61892140 - ERVL LTR ERVL -810 4954 4740 562 331 87 13 chr17 23546411 23546943 -61891537 - ERVL LTR ERVL -1143 4621 3963 332 256 163 69 chr17 23550735 23551098 -61887382 + MLT1H LTR MaLR 115 511 -38 403 351 21 16 chr17 23551477 23551668 -61886812 + L1MC4a LINE L1 5697 5888 -1920 216 0 0 0 chr17 23551840 23551864 -61886616 + (A)n Simple_repeat Simple_repeat 1 24 0 269 319 0 0 chr17 23552705 23552774 -61885706 + (TG)n Simple_repeat Simple_repeat 1 69 0 183 347 106 33 chr17 23553988 23554262 -61884218 + L2 LINE L2 1991 2284 -1030 1135 252 93 32 chr17 23554377 23554817 -61883663 + MLT1C LTR MaLR 1 467 0 394 120 40 50 chr17 23555440 23555540 -61882940 + LTR52 LTR ERVL 201 299 -122 535 212 15 6 chr17 23555647 23555796 -61882684 - L1P LINE L1 -1561 4585 4432 261 228 76 43 chr17 23555817 23555909 -61882571 + LTR52 LTR ERVL 316 410 -11 193 219 0 47 chr17 23555984 23556048 -61882432 + L2 LINE L2 2917 2977 -295 2045 133 7 0 chr17 23556069 23556370 -61882110 - AluSq SINE Alu -10 303 1 196 329 0 13 chr17 23556463 23556539 -61881941 - MIR SINE MIR -73 135 61 274 320 56 25 chr17 23557426 23557563 -61880917 + MIR SINE MIR 21 159 -49 3688 110 25 8 chr17 23557774 23558365 -61880115 - L1PA16 LINE L1 -105 6061 5461 2154 103 7 3 chr17 23558464 23558766 -61879714 - AluSp SINE Alu -10 303 1 7163 62 7 27 chr17 23558781 23560074 -61878406 - SVA Other Other -683 1386 393 21 36 0 0 chr17 23560125 23560153 -61878327 + GC_rich Low_complexity Low_complexity 1 28 0 505 259 191 0 chr17 23560333 23560495 -61877985 + MIR SINE MIR 58 250 -12 2182 90 0 32 chr17 23561044 23561355 -61877125 - AluSp SINE Alu -12 301 1 422 219 26 44 chr17 23561508 23561622 -61876858 + MIR SINE MIR 12 123 -139 * 446 254 141 27 chr17 23561618 23561803 -61876677 - L2 LINE L2 -10 3303 3098 287 259 164 31 chr17 23561831 23562117 -61876363 + L1MC5 LINE L1 7603 7926 -35 538 286 103 5 chr17 23562143 23562367 -61876113 - L2 LINE L2 -188 3084 2839 259 223 223 0 chr17 23562720 23562823 -61875657 + MIR3 SINE MIR 15 140 -68 497 306 26 91 chr17 23562834 23563262 -61875218 + L2 LINE L2 2855 3254 -18 684 300 16 15 chr17 23563343 23563585 -61874895 - L1ME3 LINE L1 -8 6162 5927 323 262 99 21 chr17 23563586 23563727 -61874753 - L1ME3 LINE L1 -269 5893 5742 1513 187 55 3 chr17 23563823 23564112 -61874368 + AluJo SINE Alu 1 304 -8 1335 289 132 68 chr17 23564119 23565275 -61873205 + HAL1 LINE L1 3 1233 -1274 2043 91 3 11 chr17 23565375 23565662 -61872818 + AluSc SINE Alu 25 309 0 3475 200 56 21 chr17 23565669 23565727 -61872753 + L1MB4 LINE L1 5277 5332 -848 2086 95 0 3 chr17 23565727 23566040 -61872440 + AluY SINE Alu 1 312 0 3475 200 56 21 chr17 23566040 23566821 -61871659 + L1MB4 LINE L1 5332 6146 -34 396 333 75 11 chr17 23567264 23567450 -61871030 + MIR SINE MIR 47 244 -18 301 242 0 17 chr17 23567937 23568057 -61870423 + GA-rich Low_complexity Low_complexity 3 120 0 32 26 0 0 chr17 23568613 23568652 -61869828 + AT_rich Low_complexity Low_complexity 1 39 0 786 231 19 0 chr17 23568658 23568814 -61869666 - AluJo/FRAM SINE Alu -21 291 133 252 0 0 0 chr17 23768916 23768944 -61669536 + (A)n Simple_repeat Simple_repeat 1 28 0 206 274 0 41 chr17 23768952 23769025 -61669455 - MIR3 SINE MIR -46 162 93 377 272 58 0 chr17 23769140 23769243 -61669237 - L2 LINE L2 -13 3300 3192 26 0 0 0 chr17 23769314 23769340 -61669140 + AT_rich Low_complexity Low_complexity 1 26 0 931 226 107 16 chr17 23770082 23770391 -61668089 + Zaphod DNA AcHobo 3694 4030 -1 2104 147 0 3 chr17 23770637 23770949 -61667531 + AluSx SINE Alu 1 311 -1 2142 119 0 7 chr17 23770972 23771274 -61667206 + AluSg SINE Alu 1 300 -10 234 269 0 0 chr17 23771347 23771399 -61667081 + MER5A DNA MER1_type 55 106 -83 2078 126 0 0 chr17 23771412 23771689 -61666791 + AluSq SINE Alu 1 277 -36 727 191 13 13 chr17 23771789 23771941 -61666539 + L1M4 LINE L1 3544 3695 -2451 258 287 22 59 chr17 23772132 23772268 -61666212 - L1ME3A LINE L1 -9 6161 6031 1105 242 4 0 chr17 23772397 23772628 -61665852 + ERVL-F LTR ERVL 5106 5337 -427 463 130 9 157 chr17 23772624 23772671 -61665809 + ERVL-F LTR ERVL 4544 4568 -1196 * 2011 127 3 43 chr17 23772671 23772994 -61665486 - AluSx SINE Alu -1 311 2 463 130 9 157 chr17 23772994 23773054 -61665426 + ERVL-F LTR ERVL 4568 4635 -1129 923 242 118 36 chr17 23773055 23773419 -61665061 + ERVL-F LTR ERVL 5344 5737 -27 36 0 0 0 chr17 23773617 23773653 -61664827 + AT_rich Low_complexity Low_complexity 1 36 0 827 78 35 0 chr17 23773672 23773788 -61664692 - AluSq/x SINE Alu -192 120 1 1460 126 94 84 chr17 23774001 23774310 -61664170 - AluJo SINE Alu 0 312 1 206 32 32 0 chr17 23774413 23774444 -61664036 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1543 207 99 39 chr17 23774475 23775052 -61663428 + MLT2F LTR ERVL 3 660 -3 1449 118 41 0 chr17 23775150 23775371 -61663109 + MER30 DNA MER1_type 1 230 0 633 207 25 0 chr17 23775390 23775511 -61662969 - FAM SINE Alu -39 146 23 967 120 0 0 chr17 23775599 23775732 -61662748 + AluSq/x SINE Alu 1 133 -179 713 192 13 13 chr17 23775832 23775983 -61662497 + L1M4 LINE L1 3545 3695 -2451 297 248 8 43 chr17 23776059 23776176 -61662304 + L1M4 LINE L1 4517 4629 -1517 * 354 250 22 59 chr17 23776174 23776310 -61662170 - L1ME3A LINE L1 -9 6161 6031 1982 157 7 7 chr17 23776368 23776668 -61661812 + AluJb SINE Alu 1 300 -12 660 70 0 0 chr17 23777183 23777269 -61661211 + L1PA11 LINE L1 6089 6174 0 278 342 32 26 chr17 23777602 23777757 -61660723 - MLT1K LTR MaLR -215 373 218 235 143 48 0 chr17 23778391 23778433 -61660047 - MLT1L LTR MaLR -350 265 222 307 301 159 6 chr17 23778500 23778676 -61659804 - MLT1K LTR MaLR -372 216 14 374 171 107 17 chr17 23778818 23778932 -61659548 - MIR3 SINE MIR -37 171 51 2392 143 25 25 chr17 23778959 23779366 -61659114 + MLT2D LTR ERVL 1 407 -7 233 375 71 0 chr17 23779812 23779924 -61658556 + LTR67 LTR ERVL 97 216 -341 2175 101 93 6 chr17 23779932 23780277 -61658203 - THE1C LTR MaLR 0 375 1 2339 218 32 2 chr17 23780396 23780831 -61657649 - ERVL LTR ERVL -851 4913 4466 516 256 31 26 chr17 23780833 23781024 -61657456 - L1M4 LINE L1 -995 5151 4960 1075 146 6 0 chr17 23781029 23781187 -61657293 - AluJb SINE Alu -16 296 138 306 292 99 25 chr17 23781256 23781417 -61657063 - L1M4 LINE L1 -1310 4836 4664 2018 129 0 39 chr17 23781438 23781749 -61656731 + AluJb SINE Alu 1 299 -13 264 143 0 0 chr17 23782001 23782056 -61656424 + Alu SINE Alu 1 41 -259 2033 147 0 0 chr17 23782056 23782342 -61656138 + AluSx SINE Alu 11 296 -16 2262 115 3 0 chr17 23782670 23782965 -61655515 + AluSx SINE Alu 1 296 -16 217 270 126 9 chr17 23782969 23783080 -61655400 - MER5A DNA MER1_type -63 126 3 25 0 0 0 chr17 23783398 23783423 -61655057 + AT_rich Low_complexity Low_complexity 1 25 0 2810 74 6 0 chr17 23783423 23783776 -61654704 - THE1A LTR MaLR 0 355 1 2070 134 7 0 chr17 23783776 23784074 -61654406 - AluSx SINE Alu -11 301 2 825 285 104 40 chr17 23784525 23785057 -61653423 - L2 LINE L2 -9 3304 2739 468 45 30 0 chr17 23785076 23785143 -61653337 - MER41B LTR ERV1 -86 549 481 249 237 54 75 chr17 23785178 23785271 -61653209 - L2 LINE L2 -615 2699 2609 339 328 0 32 chr17 23787290 23787415 -61651065 + MIR3 SINE MIR 49 169 -39 423 121 30 0 chr17 23787867 23787933 -61650547 + AluJ/FRAM SINE Alu 232 299 -13 24 0 0 0 chr17 23788057 23788081 -61650399 + AT_rich Low_complexity Low_complexity 1 24 0 418 266 28 73 chr17 23788277 23788454 -61650026 + MIR SINE MIR 91 259 -3 1957 154 6 6 chr17 23788901 23789255 -61649225 + AluJb SINE Alu 1 354 0 258 280 0 76 chr17 23790259 23790377 -61648103 - MIR SINE MIR -55 153 50 185 154 0 26 chr17 23791387 23791426 -61647054 + L2 LINE L2 3234 3271 -1 2111 112 16 19 chr17 23791611 23791924 -61646556 + AluSx SINE Alu 1 312 0 190 283 98 11 chr17 23792606 23792698 -61645782 - MER5B DNA MER1_type -75 103 4 2047 138 0 0 chr17 23792703 23793030 -61645450 + AluSq SINE Alu 1 327 0 257 258 107 44 chr17 23793593 23793752 -61644728 + L2 LINE L2 2882 3050 -222 246 173 115 0 chr17 23794656 23794708 -61643772 - MIR SINE MIR -65 143 86 349 173 27 27 chr17 23795094 23795169 -61643311 - LTR67 LTR ERVL -479 78 4 844 196 14 0 chr17 23796210 23796377 -61642103 - AluJb SINE Alu 0 308 140 241 278 56 0 chr17 23796449 23796521 -61641959 + MLT1L LTR MaLR 209 284 -331 1942 111 80 3 chr17 23796534 23796823 -61641657 - AluSq SINE Alu -2 311 1 774 238 142 40 chr17 23796911 23797214 -61641266 - MER2 DNA MER2_type -8 337 4 762 249 26 9 chr17 23797218 23797447 -61641033 - L1MC4a LINE L1 -1854 5954 5722 235 196 0 20 chr17 23797511 23797562 -61640918 + MIR SINE MIR 85 134 -128 2205 132 30 63 chr17 23798021 23798667 -61639813 - L1MB8 LINE L1 -6 6172 5514 1126 139 43 24 chr17 23798667 23798876 -61639604 - L1PA16 LINE L1 0 6166 5954 2205 132 30 63 chr17 23798876 23799123 -61639357 - L1MB8 LINE L1 -664 5514 5261 1138 184 0 10 chr17 23799221 23799422 -61639058 + AluSx SINE Alu 1 199 -113 610 56 0 0 chr17 23799422 23799494 -61638986 + AluSq/x SINE Alu 67 138 -174 20427 105 11 12 chr17 23799515 23802481 -61635999 + L1P LINE L1 11 2971 -3175 810 148 95 12 chr17 23802619 23802669 -61635811 + Tigger7 DNA MER2_type 2279 2323 -164 2099 105 46 26 chr17 23802669 23802975 -61635505 - AluSx SINE Alu 0 312 1 810 148 95 12 chr17 23802975 23803115 -61635365 + Tigger7 DNA MER2_type 2323 2487 0 318 267 57 80 chr17 23803231 23803407 -61635073 - MIR3 SINE MIR -4 204 33 2358 92 0 16 chr17 23803500 23803804 -61634676 - AluSg SINE Alu -11 299 1 192 298 0 18 chr17 23803947 23804004 -61634476 - L2 LINE L2 -3 3269 3214 1132 136 12 0 chr17 23804483 23804645 -61633835 - AluSx SINE Alu -148 164 1 25 51 0 0 chr17 23804645 23804684 -61633796 + AT_rich Low_complexity Low_complexity 1 39 0 749 162 0 0 chr17 23804685 23804802 -61633678 - FLAM_C SINE Alu -16 117 1 196 342 43 43 chr17 23804892 23805009 -61633471 - MIR SINE MIR -99 163 47 417 201 201 8 chr17 23805149 23805283 -61633197 - MIR SINE MIR -52 210 51 2152 109 0 0 chr17 23807209 23807485 -61630995 + AluSx SINE Alu 1 276 -36 189 175 0 0 chr17 23807507 23807547 -61630933 + GA-rich Low_complexity Low_complexity 1 40 0 266 0 29 0 chr17 23807645 23807679 -61630801 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1854 125 10 56 chr17 23807681 23807984 -61630496 - AluSx SINE Alu -23 289 1 850 142 8 0 chr17 23807987 23808114 -61630366 - AluJb SINE Alu -19 293 166 189 0 0 0 chr17 23808454 23808475 -61630005 + (TTTTTA)n Simple_repeat Simple_repeat 4 24 0 646 47 0 0 chr17 23808481 23808566 -61629914 - SVA Other Other -3 1383 1299 388 220 64 50 chr17 23808723 23808864 -61629616 - HAL1 LINE L1 -1 2506 2364 2457 90 6 0 chr17 23808901 23809212 -61629268 + AluSp SINE Alu 1 313 0 1518 108 27 5 chr17 23809320 23809542 -61628938 + AluSg/x SINE Alu 69 295 -17 314 223 138 11 chr17 23809724 23809818 -61628662 - Zaphod DNA AcHobo -3824 207 102 2049 120 7 3 chr17 23810066 23810358 -61628122 - AluSx SINE Alu -19 293 1 21 57 0 0 chr17 23810361 23810396 -61628084 + AT_rich Low_complexity Low_complexity 1 35 0 306 73 0 0 chr17 23810624 23810665 -61627815 + (CA)n Simple_repeat Simple_repeat 2 42 0 1098 158 6 0 chr17 23810900 23811071 -61627409 - AluSg/x SINE Alu -7 305 134 1757 115 0 0 chr17 23811071 23811305 -61627175 - AluSq SINE Alu -10 303 70 1702 164 42 7 chr17 23812086 23812372 -61626108 - AluJb SINE Alu -16 296 1 410 41 0 0 chr17 23813700 23813749 -61624731 + MADE1 DNA Mariner 31 79 -1 2188 125 0 13 chr17 23814286 23814589 -61623891 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 23814887 23814915 -61623565 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr17 23814973 23815009 -61623471 + AT_rich Low_complexity Low_complexity 1 36 0 978 203 0 0 chr17 23815021 23815203 -61623277 + AluJo SINE Alu 123 304 -8 367 302 31 19 chr17 23815203 23815362 -61623118 + L1M4 LINE L1 4461 4621 -1525 1006 258 64 20 chr17 23815534 23815926 -61622554 - LTR16A LTR ERVL -26 424 16 758 161 0 31 chr17 23816093 23816223 -61622257 - FLAM_C SINE Alu -16 127 2 204 135 27 81 chr17 23816307 23816381 -61622099 + T-rich Low_complexity Low_complexity 5 74 0 23 0 0 0 chr17 23816743 23816766 -61621714 + AT_rich Low_complexity Low_complexity 1 23 0 2219 112 0 0 chr17 23816988 23817307 -61621173 - AluSx SINE Alu 0 319 1 26 0 0 0 chr17 23817690 23817716 -61620764 + AT_rich Low_complexity Low_complexity 1 26 0 1130 174 0 19 chr17 23817854 23818067 -61620413 - MER3 DNA MER1_type 0 209 1 1700 152 4 4 chr17 23818088 23818351 -61620129 + AluSx SINE Alu 45 307 -5 545 279 75 15 chr17 23818815 23819016 -61619464 + MLT1L LTR MaLR 403 615 0 277 248 0 0 chr17 23819507 23819575 -61618905 - L1MD2 LINE L1 -83 6274 6092 249 220 0 0 chr17 23819581 23819631 -61618849 - L1MD2 LINE L1 -242 6117 6068 732 173 7 0 chr17 23819632 23819771 -61618709 + L1 LINE L1 4453 4592 -1554 1347 102 0 0 chr17 23819792 23819969 -61618511 - AluSg/x SINE Alu -16 296 120 5400 72 0 0 chr17 23819969 23820639 -61617841 - L1PA6 LINE L1 -3 6151 5482 18118 56 6 0 chr17 23819972 23823020 -61615460 - L1PA6 LINE L1 -6 6148 3089 1144 93 7 7 chr17 23823123 23823274 -61615206 - AluSq/x SINE Alu -162 151 1 1425 82 115 10 chr17 23823441 23823649 -61614831 - MER30 DNA MER1_type 0 230 1 1815 158 28 3 chr17 23824033 23824324 -61614156 + AluSx SINE Alu 1 298 -14 2246 96 6 13 chr17 23825490 23825802 -61612678 + AluSg SINE Alu 1 310 0 1887 152 0 4 chr17 23825886 23826163 -61612317 - AluSx SINE Alu -36 276 1 21 0 0 0 chr17 23827000 23827021 -61611459 + AT_rich Low_complexity Low_complexity 1 21 0 1890 101 0 35 chr17 23827400 23827658 -61610822 - AluSx SINE Alu -15 297 49 1830 112 35 54 chr17 23828508 23828822 -61609658 + AluSx SINE Alu 1 308 -4 1675 181 0 20 chr17 23829308 23829612 -61608868 + AluJo SINE Alu 5 302 -10 2252 103 7 0 chr17 23830575 23830866 -61607614 + AluSc SINE Alu 1 293 -16 198 143 0 0 chr17 23832484 23832519 -61605961 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 235 196 39 0 chr17 23833572 23833623 -61604857 + MER58 DNA MER1_type 2358 2410 -10 1872 136 7 14 chr17 23833624 23833910 -61604570 + AluSx SINE Alu 1 284 -28 1762 160 0 42 chr17 23834301 23834607 -61603873 - AluJb SINE Alu -5 307 15 200 86 29 0 chr17 23835983 23836018 -61602462 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 201 39 0 0 chr17 23836285 23836311 -61602169 + (CAA)n Simple_repeat Simple_repeat 2 27 0 956 74 0 8 chr17 23836313 23836435 -61602045 + AluSq/x SINE Alu 1 121 -192 2230 118 0 0 chr17 23836605 23836909 -61601571 - AluSx SINE Alu -8 304 1 251 206 15 29 chr17 23837779 23837847 -61600633 - L3 LINE CR1 -3 1574 1508 2019 119 36 16 chr17 23837864 23838167 -61600313 + AluSx SINE Alu 1 309 -3 960 171 11 45 chr17 23838174 23838350 -61600130 + AluSg/x SINE Alu 133 302 -8 310 250 0 0 chr17 23838908 23838968 -61599512 + L2 LINE L2 3209 3268 -4 717 275 142 19 chr17 23839142 23839516 -61598964 - L3 LINE CR1 -206 1371 952 1780 163 3 3 chr17 23839516 23839798 -61598682 - AluJb SINE Alu -19 293 12 1075 152 101 135 chr17 23839996 23840160 -61598320 - AluJo SINE Alu -15 287 136 2287 72 7 42 chr17 23840160 23840466 -61598014 - AluSg SINE Alu -14 296 2 1075 152 101 135 chr17 23840466 23840597 -61597883 - AluJo SINE Alu -166 136 2 2302 80 0 52 chr17 23840887 23841211 -61597269 - AluSx SINE Alu -5 307 1 1387 185 49 4 chr17 23841298 23841563 -61596917 + AluJo SINE Alu 18 294 -18 2175 113 0 10 chr17 23841568 23841877 -61596603 + AluSx SINE Alu 1 306 -6 201 138 0 0 chr17 23842780 23842809 -61595671 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2121 71 19 0 chr17 23842906 23843173 -61595307 + AluSp SINE Alu 3 274 -39 461 149 11 21 chr17 23843279 23843373 -61595107 + AluSp/q SINE Alu 216 308 -5 2269 87 13 10 chr17 23845965 23846274 -61592206 - AluSx SINE Alu -2 310 1 208 135 0 0 chr17 23846396 23846433 -61592047 + (T)n Simple_repeat Simple_repeat 1 37 0 2397 90 13 0 chr17 23846752 23847053 -61591427 - AluSx SINE Alu -7 305 1 327 179 2 0 chr17 23847451 23847518 -61590962 - Alu SINE Alu 0 301 244 356 313 138 45 chr17 23847747 23847897 -61590583 + L2 LINE L2 2113 2248 -1066 2240 124 0 0 chr17 23847897 23848195 -61590285 - AluSx SINE Alu -14 298 1 356 313 138 45 chr17 23848195 23848492 -61589988 + L2 LINE L2 2248 2602 -712 235 200 31 15 chr17 23848500 23848565 -61589915 - L1ME4a LINE L1 -80 6041 5976 498 230 196 0 chr17 23848592 23848740 -61589740 + MIR SINE MIR 86 262 0 1770 187 0 16 chr17 23848863 23849173 -61589307 + AluJb SINE Alu 1 305 -7 1847 114 70 92 chr17 23849376 23849509 -61588971 + MER46B DNA MER2_type 1 135 -2596 1224 193 60 14 chr17 23849509 23849794 -61588686 + AluSx SINE Alu 1 298 -14 1847 114 70 92 chr17 23849794 23849849 -61588631 + MER46B DNA MER2_type 135 56 -2675 2168 95 32 0 chr17 23849849 23850133 -61588347 + AluSg SINE Alu 1 293 -17 1847 114 70 92 chr17 23850133 23850312 -61588168 + MER46B DNA MER2_type 55 236 0 907 122 32 0 chr17 23850627 23850750 -61587730 + AluSq/x SINE Alu 9 135 -177 2051 138 0 7 chr17 23850750 23851048 -61587432 + AluSx SINE Alu 1 296 -16 1977 123 58 3 chr17 23851443 23851735 -61586745 + AluSg SINE Alu 2 309 -1 2200 133 0 3 chr17 23851920 23852229 -61586251 + AluSx SINE Alu 1 308 -4 1226 199 7 29 chr17 23853201 23853477 -61585003 - AluJo SINE Alu -42 270 1 435 276 8 0 chr17 23853477 23853611 -61584869 - L1M4 LINE L1 -3198 2948 2814 231 36 0 0 chr17 23853641 23853669 -61584811 + (TA)n Simple_repeat Simple_repeat 2 29 0 1943 127 3 17 chr17 23853669 23853822 -61584658 - AluSx SINE Alu -25 287 138 2347 85 0 0 chr17 23853822 23854117 -61584363 - AluSc SINE Alu -14 295 1 1943 127 3 17 chr17 23854117 23854254 -61584226 - AluSx SINE Alu -174 138 1 1951 128 0 20 chr17 23854328 23854625 -61583855 + AluSx SINE Alu 1 291 -21 183 42 0 0 chr17 23854736 23854760 -61583720 + (CCA)n Simple_repeat Simple_repeat 1 24 0 1632 178 89 7 chr17 23854763 23855067 -61583413 + MLT1A1 LTR MaLR 37 365 0 1675 176 24 3 chr17 23855096 23855386 -61583094 - AluJo SINE Alu -16 296 1 1013 156 11 34 chr17 23856617 23856796 -61581684 + AluJ SINE Alu 1 175 -137 2041 194 61 25 chr17 23856797 23857240 -61581240 - LTR2B LTR ERV1 0 490 32 782 158 8 0 chr17 23857255 23857382 -61581098 + AluJ SINE Alu 169 296 -16 316 77 0 0 chr17 23857510 23857562 -61580918 - L1MA1 LINE L1 -1 6301 6250 1968 166 0 6 chr17 23858000 23858313 -61580167 - AluJb SINE Alu -1 311 1 1034 206 55 0 chr17 23858863 23859081 -61579399 - MIR SINE MIR -4 258 29 1864 175 0 3 chr17 23859094 23859403 -61579077 + AluJb SINE Alu 1 308 -4 262 256 35 12 chr17 23859403 23859489 -61578991 + MIR SINE MIR 45 132 -130 223 175 0 0 chr17 23860155 23860195 -61578285 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 286 285 154 39 chr17 23860197 23860327 -61578153 - L2 LINE L2 0 3272 3128 476 183 146 7 chr17 23860444 23860581 -61577899 + MIR SINE MIR 43 198 -64 2243 112 10 0 chr17 23861840 23862135 -61576345 + AluSx SINE Alu 1 298 -14 335 222 22 0 chr17 23862162 23862252 -61576228 - MER113 DNA MER1_type? -429 92 1 765 220 30 30 chr17 23862818 23863018 -61575462 - MIR SINE MIR -55 207 8 2176 128 3 3 chr17 23863271 23863577 -61574903 + AluSx SINE Alu 1 306 -6 1740 153 3 29 chr17 23864447 23864754 -61573726 + AluJb SINE Alu 1 299 -13 2263 109 3 0 chr17 23864762 23865064 -61573416 + AluSg SINE Alu 5 307 -3 330 171 0 0 chr17 23866017 23866087 -61572393 + (TA)n Simple_repeat Simple_repeat 1 70 0 2332 97 3 0 chr17 23866130 23866429 -61572051 - AluSp SINE Alu -13 300 1 3213 111 73 52 chr17 23866449 23866604 -61571876 - MER4B LTR ERV1 0 610 460 2388 112 0 0 chr17 23866604 23866917 -61571563 - AluSp SINE Alu 0 313 1 3213 111 73 52 chr17 23866917 23867319 -61571161 - MER4B LTR ERV1 -150 460 41 1919 148 0 0 chr17 23867865 23868143 -61570337 + AluSx SINE Alu 35 312 0 1956 140 3 10 chr17 23869771 23870085 -61568395 - AluJo SINE Alu 0 312 1 1940 131 7 3 chr17 23870351 23870655 -61567825 - AluSx SINE Alu 0 305 1 26 30 0 0 chr17 23870926 23870959 -61567521 + AT_rich Low_complexity Low_complexity 1 33 0 879 158 0 0 chr17 23870959 23871086 -61567394 - FLAM_C SINE Alu -16 127 1 219 88 0 0 chr17 23871090 23871124 -61567356 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 610 23 0 3 chr17 23871120 23871203 -61567277 - L1PA3 LINE L1 0 6155 6079 475 270 56 43 chr17 23871209 23871442 -61567038 - L1ME LINE L1 -512 5609 5374 1787 139 0 96 chr17 23871608 23871864 -61566616 - AluJo SINE Alu -1 311 95 2090 136 7 3 chr17 23871864 23872166 -61566314 - AluSx SINE Alu -9 303 1 1787 139 0 96 chr17 23872166 23872253 -61566227 - AluJo SINE Alu -217 95 1 298 220 92 28 chr17 23872444 23872553 -61565927 - LTR33 LTR ERVL -52 469 354 501 277 71 34 chr17 23872593 23872831 -61565649 - LTR33 LTR ERVL -274 247 1 1806 151 11 0 chr17 23872990 23873295 -61565185 + AluJo SINE Alu 1 308 0 1763 177 37 0 chr17 23874226 23874526 -61563954 + AluSx SINE Alu 1 311 -1 663 138 11 0 chr17 23874754 23874848 -61563632 + AluSq/x SINE Alu 33 127 -185 723 148 87 46 chr17 23874958 23875154 -61563326 - LTR36 LTR ERV1 -407 204 1 521 267 47 37 chr17 23875309 23875500 -61562980 + MIR SINE MIR 66 258 -4 253 328 35 52 chr17 23875555 23875671 -61562809 + MIR SINE MIR 117 230 -32 268 297 36 103 chr17 23875747 23875942 -61562538 + MIR3 SINE MIR 13 194 -14 522 177 7 14 chr17 23875966 23876093 -61562387 + (CA)n Simple_repeat Simple_repeat 2 129 -12 3172 146 155 29 chr17 23876093 23876595 -61561885 - LTR8A LTR ERV1 0 727 124 1730 157 14 7 chr17 23876595 23876919 -61561561 + AluSx SINE Alu 1 326 0 3172 146 155 29 chr17 23876919 23877061 -61561419 - LTR8A LTR ERV1 -603 124 1 522 177 7 14 chr17 23877061 23877074 -61561406 + (CA)n Simple_repeat Simple_repeat 129 141 0 1732 151 56 0 chr17 23877761 23878046 -61560434 - AluSx SINE Alu -11 301 1 373 212 8 85 chr17 23878575 23878618 -61559862 - MIR SINE MIR -59 203 158 2498 78 3 0 chr17 23878618 23878924 -61559556 - AluSp SINE Alu -1 312 6 373 212 8 85 chr17 23878924 23878998 -61559482 - MIR SINE MIR -104 158 95 240 111 0 0 chr17 23879087 23879123 -61559357 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 468 165 220 9 chr17 23879123 23879232 -61559248 - FLAM_C SINE Alu -1 132 1 1190 183 0 25 chr17 23879878 23880080 -61558400 + AluJo SINE Alu 86 282 -30 337 231 111 9 chr17 23880644 23880752 -61557728 + LTR67 LTR ERVL 428 546 -11 1546 163 13 59 chr17 23880754 23881061 -61557419 + AluJo SINE Alu 1 293 -19 192 232 188 43 chr17 23881135 23881204 -61557276 - L2 LINE L2 -12 3260 3182 679 213 65 24 chr17 23881347 23881485 -61556995 + L2 LINE L2 2639 2787 -527 2878 169 18 84 chr17 23881485 23882112 -61556368 - LTR9 LTR ERV1 0 612 28 2136 93 66 0 chr17 23882112 23882401 -61556079 - AluSc SINE Alu -1 308 1 2878 169 18 84 chr17 23882401 23882428 -61556052 - LTR9 LTR ERV1 -584 28 1 679 213 65 24 chr17 23882428 23882458 -61556022 + L2 LINE L2 2787 2814 -500 274 215 43 21 chr17 23882461 23882554 -61555926 + MLT1J LTR MaLR 100 194 -317 1829 165 28 0 chr17 23883159 23883444 -61555036 + AluJb SINE Alu 1 293 -19 2298 87 0 14 chr17 23883553 23883889 -61554591 + AluSx SINE Alu 1 332 0 422 321 87 35 chr17 23883897 23884461 -61554019 + L1ME3A LINE L1 4614 5206 -940 578 244 63 25 chr17 23884505 23884743 -61553737 + L1ME3A LINE L1 5313 5562 -600 230 221 39 26 chr17 23884749 23884826 -61553654 + MER46C DNA MER2_type 10 87 -251 461 17 17 0 chr17 23884826 23884884 -61553596 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1866 101 67 0 chr17 23884884 23885152 -61553328 - AluSx SINE Alu -26 286 1 231 256 26 0 chr17 23885184 23885262 -61553218 + (CGG)n Simple_repeat Simple_repeat 2 81 0 619 229 32 6 chr17 23885780 23886049 -61552431 + MER52A LTR ERV1 149 597 -681 510 281 133 12 chr17 23886067 23886149 -61552331 + L1ME3A LINE L1 5565 5636 -534 1974 138 3 14 chr17 23886149 23886446 -61552034 + AluJb SINE Alu 1 294 -18 510 281 133 12 chr17 23886446 23886687 -61551793 + L1ME3A LINE L1 5636 5927 -243 1273 152 0 0 chr17 23886721 23886899 -61551581 + AluSx SINE Alu 24 201 -111 240 235 20 31 chr17 23886916 23887014 -61551466 + (TA)n Simple_repeat Simple_repeat 2 98 0 237 241 36 12 chr17 23887124 23887207 -61551273 + L1MC4 LINE L1 7918 8002 -40 225 0 0 0 chr17 23887213 23887238 -61551242 + (TTATA)n Simple_repeat Simple_repeat 4 28 0 2032 129 0 27 chr17 23887238 23887532 -61550948 - AluSx SINE Alu -26 286 1 782 196 79 8 chr17 23887532 23887751 -61550729 + MSTC LTR MaLR 168 428 0 854 123 14 14 chr17 23887751 23887897 -61550583 - L1M3 LINE L1 -593 5578 5433 969 182 30 10 chr17 23888770 23889058 -61549422 - L1M3 LINE L1 -742 5441 5155 191 313 0 83 chr17 23889058 23889154 -61549326 - L2 LINE L2 -266 3006 2919 221 234 31 47 chr17 23889298 23889362 -61549118 + MER5A DNA MER1_type 12 74 -115 770 150 0 0 chr17 23889374 23889487 -61548993 + FLAM_C SINE Alu 13 125 -18 416 289 8 8 chr17 23889497 23889618 -61548862 + MER5A DNA MER1_type 61 181 -8 252 306 0 14 chr17 23890825 23890897 -61547583 + MIR SINE MIR 191 261 -1 479 261 109 7 chr17 23890906 23891044 -61547436 + MIR SINE MIR 95 246 -16 1517 195 0 43 chr17 23891089 23891412 -61547068 - AluJb SINE Alu -3 309 1 373 200 7 89 chr17 23891429 23891564 -61546916 - L1MA8 LINE L1 0 6291 6168 357 230 14 14 chr17 23891571 23891645 -61546835 + L2 LINE L2 3180 3253 -19 579 66 0 0 chr17 23891645 23891721 -61546759 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 1252 130 0 21 chr17 23892111 23892303 -61546177 - AluSg/x SINE Alu -5 305 118 589 141 0 0 chr17 23892434 23892526 -61545954 - FLAM_C SINE Alu -24 119 28 456 308 73 13 chr17 23892526 23892760 -61545720 + L2 LINE L2 2885 3132 -181 2305 121 0 0 chr17 23892856 23893163 -61545317 - AluSg SINE Alu -3 307 1 411 289 60 118 chr17 23893410 23893759 -61544721 + L2 LINE L2 2944 3272 0 1986 162 0 3 chr17 23893760 23894069 -61544411 + AluJb SINE Alu 1 308 -4 1705 235 60 72 chr17 23894345 23894581 -61543899 - L1ME3A LINE L1 -23 6147 5910 2217 106 0 41 chr17 23894581 23894901 -61543579 - AluSx SINE Alu -5 307 1 1686 162 67 3 chr17 23894904 23895188 -61543292 - AluJo SINE Alu -10 302 1 1705 235 60 72 chr17 23895188 23895610 -61542870 - L1ME3A LINE L1 -262 5908 5493 1807 167 3 23 chr17 23895793 23896098 -61542382 - AluJo SINE Alu -9 303 5 1308 204 0 22 chr17 23896347 23896661 -61541819 + L1M4 LINE L1 4984 5290 -856 416 100 11 144 chr17 23896661 23896751 -61541729 + MADE1 DNA Mariner 2 79 -1 523 195 62 9 chr17 23896798 23896911 -61541569 + MLT1C LTR MaLR 349 467 0 282 87 0 0 chr17 23896962 23897008 -61541472 + (TG)n Simple_repeat Simple_repeat 2 47 0 1854 137 56 3 chr17 23897113 23897398 -61541082 + AluJo SINE Alu 2 301 -11 317 301 147 47 chr17 23897831 23898233 -61540247 + L2 LINE L2 2815 3256 -16 2022 144 3 0 chr17 23898251 23898556 -61539924 - AluJb SINE Alu -6 306 1 329 260 202 0 chr17 23898727 23898831 -61539649 - L2 LINE L2 0 3272 3148 742 279 75 47 chr17 23898883 23899285 -61539195 - MLT1K LTR MaLR 0 588 176 243 0 45 45 chr17 23899437 23899481 -61538999 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1259 50 0 13 chr17 23899481 23899640 -61538840 - L1PA4 LINE L1 -11 6144 5988 370 284 50 14 chr17 23899643 23899784 -61538696 - MIR3 SINE MIR -60 148 3 1940 156 16 10 chr17 23899852 23900159 -61538321 - AluSx SINE Alu -2 310 2 684 36 0 0 chr17 23900781 23900864 -61537616 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1713 144 0 0 chr17 23900866 23901109 -61537371 - AluJb SINE Alu -28 284 42 808 184 41 10 chr17 23901148 23901344 -61537136 + MLT1C LTR MaLR 1 202 -265 1080 230 26 15 chr17 23901429 23901694 -61536786 + MLT1C LTR MaLR 200 467 0 2173 140 0 0 chr17 23901785 23902093 -61536387 - AluSx SINE Alu -4 308 1 2032 166 0 0 chr17 23902096 23902397 -61536083 - AluJb SINE Alu -11 301 1 447 323 105 4 chr17 23902514 23902743 -61535737 + L3 LINE CR1 1231 1482 -95 260 304 0 0 chr17 23902787 23902843 -61535637 - MIR SINE MIR -190 72 17 181 287 0 64 chr17 23902848 23902942 -61535538 + MIR3 SINE MIR 118 205 -3 607 227 0 0 chr17 23903199 23903309 -61535171 + MER81 DNA DNA 5 114 0 477 309 82 66 chr17 23904052 23904268 -61534212 + L2 LINE L2 2813 3024 -248 2077 127 148 13 chr17 23904268 23904645 -61533835 - MSTA LTR MaLR 0 428 1 477 309 82 66 chr17 23904645 23904881 -61533599 + L2 LINE L2 3024 3272 0 362 218 208 0 chr17 23905521 23905622 -61532858 - L1MDa LINE L1 -4089 1991 1870 1334 149 7 117 chr17 23905625 23905907 -61532573 + AluJb SINE Alu 37 287 -25 2294 104 10 0 chr17 23906059 23906358 -61532122 - AluSp SINE Alu -5 308 7 689 173 8 31 chr17 23906364 23906491 -61531989 - FLAM_C SINE Alu -8 125 2 1387 149 0 0 chr17 23906577 23906772 -61531708 - AluJb SINE Alu 0 312 118 885 254 67 40 chr17 23906774 23907179 -61531301 - L1MDa LINE L1 -4517 1744 1329 357 24 0 0 chr17 23907181 23907223 -61531257 + (TTTC)n Simple_repeat Simple_repeat 2 43 0 1651 112 5 0 chr17 23907252 23907466 -61531014 - AluSx SINE Alu -97 215 1 1147 159 0 0 chr17 23907487 23907663 -61530817 - AluSg/x SINE Alu 0 312 137 727 154 0 60 chr17 23907738 23907887 -61530593 - FLAM_C SINE Alu -1 142 3 741 188 14 158 chr17 23907901 23908363 -61530117 - L1MDa LINE L1 -4879 1201 813 1574 120 0 0 chr17 23908363 23908571 -61529909 + AluSg/x SINE Alu 85 292 -20 741 188 14 158 chr17 23908571 23908603 -61529877 - L1MDa LINE L1 -5267 813 778 1348 211 56 83 chr17 23908618 23908675 -61529805 - L1M4 LINE L1 -978 5168 5111 1846 164 4 4 chr17 23908675 23908976 -61529504 - AluSx SINE Alu 0 301 1 1348 211 56 83 chr17 23908976 23909055 -61529425 - L1M4 LINE L1 -1035 5111 5031 2308 120 48 31 chr17 23909055 23909413 -61529067 + THE1B LTR MaLR 1 364 0 11827 89 17 3 chr17 23909413 23910971 -61527509 + THE1B-int LTR MaLR 1 1580 0 2058 124 75 29 chr17 23910971 23911319 -61527161 + THE1B LTR MaLR 1 364 0 1348 211 56 83 chr17 23911319 23911657 -61526823 - L1M4 LINE L1 -1112 5034 4703 762 249 31 0 chr17 23911670 23911895 -61526585 - L1MDa LINE L1 -2629 3451 3220 3101 176 30 66 chr17 23911896 23912257 -61526223 + MER44D DNA MER2_type 1 373 -2214 3981 115 37 94 chr17 23912257 23912309 -61526171 + LTR8 LTR ERV1 1 54 -637 2172 129 0 0 chr17 23912309 23912604 -61525876 + AluSx SINE Alu 1 295 -17 3981 115 37 94 chr17 23912604 23913042 -61525438 + LTR8 LTR ERV1 54 438 -253 1978 166 0 3 chr17 23913042 23913350 -61525130 - AluJb SINE Alu -5 307 1 3981 115 37 94 chr17 23913350 23913591 -61524889 + LTR8 LTR ERV1 438 691 0 3101 176 30 66 chr17 23913591 23913960 -61524520 + MER44D DNA MER2_type 373 705 0 1672 231 26 0 chr17 23913960 23914285 -61524195 - L1MDa LINE L1 -2860 3220 2876 1823 163 3 19 chr17 23914285 23914598 -61523882 - AluJo SINE Alu -4 308 1 1672 231 26 0 chr17 23914598 23914765 -61523715 - L1MDa LINE L1 -3204 2876 2715 1564 242 82 50 chr17 23914776 23915358 -61523122 - L1MDa LINE L1 -5441 629 29 241 299 39 0 chr17 23915382 23915459 -61523021 - MIR SINE MIR -136 126 47 741 278 99 9 chr17 23915645 23915868 -61522612 + MIR SINE MIR 8 250 -12 190 258 211 31 chr17 23916033 23916161 -61522319 - MIR3 SINE MIR -18 190 40 356 274 20 0 chr17 23916749 23916851 -61521629 - MIR SINE MIR -101 161 58 279 275 184 0 chr17 23917007 23917116 -61521364 - L2 LINE L2 0 3272 3144 1677 171 10 17 chr17 23917728 23918026 -61520454 + AluJb SINE Alu 1 296 -16 647 225 39 16 chr17 23918227 23918421 -61520059 - MIR SINE MIR -28 234 34 190 318 48 0 chr17 23919286 23919349 -61519131 - MIR SINE MIR -3 259 194 2531 83 3 0 chr17 23919396 23919708 -61518772 - AluSp SINE Alu 0 313 1 2007 161 0 13 chr17 23919708 23920019 -61518461 - AluSx SINE Alu -5 307 1 234 150 0 0 chr17 23920077 23920117 -61518363 + (CAT)n Simple_repeat Simple_repeat 2 41 0 532 289 27 7 chr17 23920133 23920282 -61518198 - MIR SINE MIR -32 230 79 244 316 11 32 chr17 23920904 23920999 -61517481 + MIR3 SINE MIR 81 173 -35 324 272 25 0 chr17 23921281 23921362 -61517118 - MLT1K LTR MaLR -8 580 498 295 313 82 8 chr17 23921486 23921620 -61516860 + MLT1J LTR MaLR 156 299 -212 565 280 79 77 chr17 23921782 23922091 -61516389 - MLT1K LTR MaLR -201 387 10 208 164 213 0 chr17 23923142 23923203 -61515277 + MIR SINE MIR 16 89 -173 1799 164 11 4 chr17 23923212 23923517 -61514963 - AluJo SINE Alu 0 307 1 34 0 0 0 chr17 23923529 23923563 -61514917 + AT_rich Low_complexity Low_complexity 1 34 0 2180 127 0 32 chr17 23923576 23923891 -61514589 - AluSx SINE Alu -7 305 1 1557 171 18 55 chr17 23923909 23924028 -61514452 + L1MB8 LINE L1 5812 5934 -244 2576 75 0 0 chr17 23924028 23924336 -61514144 + AluY SINE Alu 1 308 -3 1557 171 18 55 chr17 23924336 23924597 -61513883 + L1MB8 LINE L1 5934 6178 0 281 245 49 29 chr17 23925097 23925199 -61513281 + MIR SINE MIR 42 145 -63 203 105 53 0 chr17 23925401 23925439 -61513041 + CT-rich Low_complexity Low_complexity 1 40 0 2121 160 0 0 chr17 23925439 23925746 -61512734 - AluSx SINE Alu -5 307 1 250 344 39 0 chr17 23925753 23925881 -61512599 - L3 LINE CR1 -162 1415 1283 21 0 0 0 chr17 23927297 23927318 -61511162 + AT_rich Low_complexity Low_complexity 1 21 0 837 282 155 7 chr17 23927762 23928172 -61510308 - L2 LINE L2 -48 3265 2791 857 145 14 29 chr17 23928290 23928428 -61510052 - AluJo SINE Alu -176 136 1 946 180 30 54 chr17 23928448 23928700 -61509780 - L1ME2 LINE L1 -14 6148 5875 6740 131 38 11 chr17 23928733 23931025 -61507455 - L1MA3 LINE L1 0 7724 5367 631 115 35 26 chr17 23931019 23931132 -61507348 - L1MA3 LINE L1 -7436 129 16 * 392 236 9 19 chr17 23931131 23931237 -61507243 - L1ME2 LINE L1 -271 5895 5791 * 1438 210 39 45 chr17 23931241 23931762 -61506718 - L1ME2 LINE L1 -662 5502 4981 1661 173 35 11 chr17 23931762 23932046 -61506434 + AluJo SINE Alu 1 291 -21 1438 210 39 45 chr17 23932046 23932106 -61506374 - L1ME2 LINE L1 -1183 4981 4922 1322 167 103 55 chr17 23932507 23932855 -61505625 + MLT1A1 LTR MaLR 1 365 0 326 307 43 14 chr17 23933037 23933177 -61505303 - MIR SINE MIR -63 199 56 297 320 72 20 chr17 23933738 23933891 -61504589 + L2 LINE L2 3111 3271 -1 1988 114 60 20 chr17 23933891 23934190 -61504290 + AluSp SINE Alu 1 311 -2 541 237 25 0 chr17 23934304 23934441 -61504039 + MIR SINE MIR 115 252 -10 311 279 36 57 chr17 23934902 23935042 -61503438 - L1ME LINE L1 -386 5735 5599 303 313 45 0 chr17 23935206 23935318 -61503162 + MLT1K LTR MaLR 132 248 -340 22 0 0 0 chr17 23935329 23935351 -61503129 + AT_rich Low_complexity Low_complexity 1 22 0 767 208 61 15 chr17 23935395 23935592 -61502888 - L1MC4 LINE L1 -143 7899 7694 594 190 58 29 chr17 23935609 23935746 -61502734 - AluJo SINE Alu -66 246 106 1490 235 59 8 chr17 23935747 23936130 -61502350 - L1MC4 LINE L1 -380 7662 7300 2049 145 7 0 chr17 23936130 23936427 -61502053 - AluJb SINE Alu -13 299 1 1490 235 59 8 chr17 23936427 23936772 -61501708 - L1MC4 LINE L1 -742 7300 6751 207 0 0 0 chr17 23936779 23936802 -61501678 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 557 324 111 20 chr17 23936898 23937204 -61501276 + MLT1K LTR MaLR 255 588 0 1555 161 24 24 chr17 23937637 23937892 -61500588 + AluJo SINE Alu 1 255 -57 297 179 21 11 chr17 23938146 23938241 -61500239 + (CA)n Simple_repeat Simple_repeat 2 97 0 1866 178 0 0 chr17 23938313 23938650 -61499830 - AluJo SINE Alu 0 337 1 565 178 8 11 chr17 23938711 23938953 -61499527 + AluJ SINE Alu 1 312 0 1975 157 3 16 chr17 23939228 23939540 -61498940 - AluJb SINE Alu -4 308 1 269 238 12 25 chr17 23939809 23939889 -61498591 - MIR SINE MIR -167 95 17 1733 53 0 9 chr17 23940398 23940626 -61497854 + L1PA8 LINE L1 5947 6172 0 245 291 145 8 chr17 23940635 23940752 -61497728 + MIR SINE MIR 54 186 -76 191 286 0 20 chr17 23940863 23940912 -61497568 + L2 LINE L2 3211 3258 -14 2421 98 25 19 chr17 23941155 23941521 -61496959 - THE1C LTR MaLR 0 375 8 475 279 75 78 chr17 23941652 23941690 -61496790 - MLT1K LTR MaLR -40 548 511 2100 143 7 0 chr17 23941690 23941983 -61496497 + AluSx SINE Alu 1 295 -17 475 279 75 78 chr17 23941983 23942266 -61496214 - MLT1K LTR MaLR -77 511 228 2048 115 3 94 chr17 23942268 23942607 -61495873 - AluSx SINE Alu -4 308 1 1770 163 0 14 chr17 23942648 23942931 -61495549 + AluJo SINE Alu 14 292 -20 22 0 0 0 chr17 23942931 23942953 -61495527 + AT_rich Low_complexity Low_complexity 1 22 0 455 311 30 16 chr17 23943177 23943368 -61495112 + MIR SINE MIR 5 196 -62 382 132 26 0 chr17 23943735 23943811 -61494669 + CT-rich Low_complexity Low_complexity 4 81 0 569 325 65 56 chr17 23943831 23944333 -61494147 - L2 LINE L2 -13 3259 2754 329 269 119 8 chr17 23944841 23944975 -61493505 - L3 LINE CR1 -3 1574 1426 649 273 102 72 chr17 23945632 23946006 -61492474 - L2 LINE L2 -1 3271 2887 1237 137 0 11 chr17 23946417 23946600 -61491880 - AluSg/x SINE Alu -16 294 114 * 1347 148 51 34 chr17 23946599 23946836 -61491644 - AluSx SINE Alu -71 241 1 814 141 0 15 chr17 23946843 23946978 -61491502 - FLAM_C SINE Alu 0 133 1 225 123 298 0 chr17 23946982 23947039 -61491441 - L1M3 LINE L1 -508 5672 5599 716 187 80 0 chr17 23947039 23947189 -61491291 - AluJo/FRAM SINE Alu -16 296 135 704 109 0 0 chr17 23947179 23947280 -61491200 + AluSp/q SINE Alu 163 263 -50 * 1668 192 20 13 chr17 23947280 23947676 -61490804 + L1MB4 LINE L1 5681 6079 -101 22 0 0 0 chr17 23947724 23947746 -61490734 + AT_rich Low_complexity Low_complexity 1 22 0 1875 146 15 0 chr17 23948347 23948621 -61489859 + AluSx SINE Alu 1 278 -34 243 0 0 0 chr17 23948625 23948652 -61489828 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1902 131 45 0 chr17 23948656 23948947 -61489533 + AluSg SINE Alu 1 303 0 21 36 0 0 chr17 23949046 23949074 -61489406 + AT_rich Low_complexity Low_complexity 1 28 0 279 0 0 0 chr17 23949263 23949294 -61489186 + (CA)n Simple_repeat Simple_repeat 2 32 0 204 219 248 66 chr17 23949367 23949504 -61488976 - MIR SINE MIR -57 205 44 475 196 116 9 chr17 23950603 23950715 -61487765 - FLAM_C SINE Alu -7 126 3 229 250 77 125 chr17 23950715 23950923 -61487557 + MIR SINE MIR 59 256 -6 1090 183 39 0 chr17 23951028 23951236 -61487244 - MER20 DNA MER1_type -3 216 1 249 311 67 25 chr17 23951397 23951516 -61486964 + L2 LINE L2 3190 3313 0 1493 157 107 20 chr17 23951943 23952288 -61486192 + THE1C LTR MaLR 1 375 0 183 80 0 0 chr17 23952639 23952664 -61485816 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1791 145 26 48 chr17 23952744 23952841 -61485639 + MER2 DNA MER2_type 1 99 -245 2299 113 3 0 chr17 23952841 23953143 -61485337 - AluSp SINE Alu -10 303 1 1791 145 26 48 chr17 23953143 23953397 -61485083 + MER2 DNA MER2_type 99 344 0 294 143 11 143 chr17 23954406 23954497 -61483983 - SN5 Other centromeric -77 378 300 992 308 40 11 chr17 23959249 23959769 -61478711 + L1MC4 LINE L1 5479 6013 -2029 246 99 37 37 chr17 23959881 23959962 -61478518 + A-rich Low_complexity Low_complexity 4 84 0 7110 41 2 0 chr17 23963260 23964917 -61473563 - L1PA5 LINE L1 0 6154 4495 568 304 105 22 chr17 23967014 23967415 -61471065 + ERVL LTR ERVL 4007 4440 -1324 351 184 112 61 chr17 23967868 23967935 -61470545 - L1MD3 LINE L1 -74 7921 7846 1630 187 0 23 chr17 23967935 23968245 -61470235 + AluJo SINE Alu 1 303 -9 351 184 112 61 chr17 23968245 23968275 -61470205 - L1MD3 LINE L1 -149 7846 7819 324 289 37 30 chr17 23968301 23968436 -61470044 - L1MC3 LINE L1 -154 7631 7496 905 196 58 0 chr17 23968436 23968625 -61469855 - Tigger3(Golem) DNA MER2_type -98 2931 2732 655 209 9 0 chr17 23968626 23968741 -61469739 + FLAM_C SINE Alu 2 117 -16 395 197 0 13 chr17 23968786 23968862 -61469618 - Tigger3(Golem) DNA MER2_type -2951 78 4 659 214 121 0 chr17 23968866 23969006 -61469474 - MER2 DNA MER2_type -188 157 1 1099 239 40 71 chr17 23969032 23969504 -61468976 - L1ME3A LINE L1 -161 6005 5537 605 238 21 0 chr17 23969550 23969693 -61468787 + MIR SINE MIR 47 192 -70 326 298 169 28 chr17 23970557 23970648 -61467832 + L1ME4a LINE L1 5878 5955 -166 2139 129 3 0 chr17 23970648 23970950 -61467530 + AluSx SINE Alu 1 303 -9 326 298 169 28 chr17 23970950 23971036 -61467444 + L1ME4a LINE L1 5955 6080 -41 704 321 64 19 chr17 23971268 23971629 -61466851 + LTR16A LTR ERVL 21 397 -53 255 288 147 31 chr17 23971652 23971843 -61466637 + L2 LINE L2 3100 3312 -1 2294 122 0 0 chr17 23972069 23972372 -61466108 + AluSg SINE Alu 1 303 -7 2309 113 3 0 chr17 23972454 23972755 -61465725 + AluSp SINE Alu 1 302 -11 1297 189 42 67 chr17 23972759 23973042 -61465438 + AluJo SINE Alu 1 268 -44 1867 183 3 0 chr17 23973111 23973417 -61465063 + AluJo SINE Alu 1 307 -5 422 288 95 41 chr17 23973516 23973842 -61464638 + L1MC/D LINE L1 5377 5727 -465 1290 153 9 52 chr17 23973845 23974074 -61464406 + AluJo SINE Alu 88 306 -6 1278 214 6 67 chr17 23974103 23974434 -61464046 + AluSx SINE Alu 1 311 -1 213 219 61 24 chr17 23975061 23975143 -61463337 + L2 LINE L2 2041 2125 -1189 1777 175 7 0 chr17 23975221 23975534 -61462946 + AluJb SINE Alu 1 315 0 561 289 77 66 chr17 23975576 23975882 -61462598 + L2 LINE L2 2131 2445 -869 1943 157 3 22 chr17 23975882 23976200 -61462280 - AluSx SINE Alu 0 312 1 561 289 77 66 chr17 23976200 23976346 -61462134 + L2 LINE L2 2445 2588 -726 643 215 15 0 chr17 23976348 23976483 -61461997 - MER89 LTR ERV1 0 559 423 1889 163 6 19 chr17 23976483 23976891 -61461589 - AluJb SINE Alu 0 404 1 2210 120 10 0 chr17 23976991 23977299 -61461181 - AluSp SINE Alu -2 311 1 2265 131 0 0 chr17 23977313 23977625 -61460855 - AluSx SINE Alu 0 312 1 382 151 0 0 chr17 23977627 23977700 -61460780 - L1M4 LINE L1 -946 5200 5128 1784 140 18 87 chr17 23977733 23977850 -61460630 + MER47A DNA MER2_type 1 124 -2199 2214 113 3 3 chr17 23977850 23978143 -61460337 + AluSp SINE Alu 3 295 -18 306 0 0 0 chr17 23978153 23978187 -61460293 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1491 117 17 35 chr17 23978187 23978418 -61460062 + AluY SINE Alu 85 311 0 1784 140 18 87 chr17 23978418 23978681 -61459799 + MER47A DNA MER2_type 131 366 0 689 281 215 7 chr17 23978700 23979105 -61459375 - L2 LINE L2 -773 2541 2053 381 248 64 64 chr17 23979106 23979263 -61459217 + MIR SINE MIR 101 257 -5 729 224 29 6 chr17 23979674 23979848 -61458632 - MER45A DNA AcHobo 0 178 1 1931 136 41 0 chr17 23980180 23980502 -61457978 - AluSq SINE Alu 0 335 2 1550 166 72 4 chr17 23980830 23981108 -61457372 - AluJb SINE Alu -15 297 1 2012 132 10 7 chr17 23981116 23981411 -61457069 - AluJb SINE Alu -14 298 3 181 291 13 25 chr17 23982044 23982123 -61456357 - L2 LINE L2 -181 3091 3014 313 331 93 0 chr17 23982208 23982359 -61456121 + L2 LINE L2 1545 1709 -1605 479 168 0 10 chr17 23982374 23982475 -61456005 + GA-rich Low_complexity Low_complexity 4 103 0 390 306 123 12 chr17 23983209 23983379 -61455101 - MIR SINE MIR -22 240 52 2158 134 3 10 chr17 23983689 23984002 -61454478 - AluJb SINE Alu -1 311 1 347 235 24 0 chr17 23984003 23984088 -61454392 - L2 LINE L2 -1515 1799 1713 626 296 141 30 chr17 23984091 23984558 -61453922 + LTR33 LTR ERVL 1 519 -2 287 48 0 24 chr17 23984564 23984606 -61453874 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 1219 290 94 52 chr17 23984609 23984658 -61453822 - L2 LINE L2 -1623 1691 1646 2098 146 10 7 chr17 23984658 23984960 -61453520 + AluSx SINE Alu 1 303 -9 1219 290 94 52 chr17 23984960 23985353 -61453127 - L2 LINE L2 -1668 1646 1201 2247 118 3 3 chr17 23985353 23985666 -61452814 - AluSq SINE Alu 0 313 1 1219 290 94 52 chr17 23985666 23985980 -61452500 - L2 LINE L2 -2113 1201 902 219 260 80 73 chr17 23986002 23986152 -61452328 - L2 LINE L2 -2719 595 445 435 130 0 26 chr17 23986526 23986603 -61451877 - AluJb SINE Alu -178 134 60 247 191 44 15 chr17 23986612 23986680 -61451800 - MIR SINE MIR -109 153 84 426 219 0 0 chr17 23987365 23987447 -61451033 + L2 LINE L2 3232 3313 0 333 355 53 0 chr17 23987750 23987978 -61450502 + L2 LINE L2 2467 2706 -608 403 216 39 0 chr17 23988070 23988172 -61450308 - MER5A DNA MER1_type -80 109 4 702 306 72 16 chr17 23988176 23988679 -61449801 + L2 LINE L2 2763 3302 -11 225 277 62 0 chr17 23989059 23989124 -61449356 - MIR SINE MIR -112 150 82 * 230 213 93 27 chr17 23989094 23989169 -61449311 - MIR SINE MIR -72 136 57 * 509 309 73 32 chr17 23989162 23989408 -61449072 + L2 LINE L2 3051 3306 -7 1693 168 44 7 chr17 23989450 23989748 -61448732 + AluJo SINE Alu 1 309 -3 1811 160 0 58 chr17 23990148 23990461 -61448019 + AluJo SINE Alu 1 295 -17 803 212 0 62 chr17 23990606 23990799 -61447681 + MER5A DNA MER1_type 7 187 -2 488 208 66 0 chr17 23991597 23991703 -61446777 - MLT1H1 LTR MaLR -438 117 5 467 264 42 14 chr17 23992096 23992155 -61446325 + MIR SINE MIR 101 157 -105 2393 93 7 0 chr17 23992155 23992465 -61446015 + AluSq SINE Alu 1 312 -1 467 264 42 14 chr17 23992465 23992549 -61445931 + MIR SINE MIR 157 248 -14 608 228 57 5 chr17 23992586 23992779 -61445701 + L1M4 LINE L1 4976 5178 -968 476 284 135 10 chr17 23993252 23993460 -61445020 - MIR SINE MIR 0 262 29 189 74 0 0 chr17 23993960 23993987 -61444493 + (GGGGA)n Simple_repeat Simple_repeat 2 28 0 26 64 0 0 chr17 23993988 23994035 -61444445 + GC_rich Low_complexity Low_complexity 1 47 0 23 68 0 0 chr17 23994271 23994315 -61444165 + GC_rich Low_complexity Low_complexity 1 44 0 373 265 109 20 chr17 23996460 23996607 -61441873 + MIR3 SINE MIR 34 193 -15 252 254 32 16 chr17 23996824 23996887 -61441593 + MIR SINE MIR 82 145 -63 970 296 149 8 chr17 23997264 23997659 -61440821 - MLT1J LTR MaLR -45 466 16 470 183 269 91 chr17 23998812 23998881 -61439599 + MIR SINE MIR 27 82 -180 417 244 122 33 chr17 23998881 23999061 -61439419 + MER91A DNA MER1_type 1 196 0 470 183 269 91 chr17 23999061 23999188 -61439292 + MIR SINE MIR 82 258 -4 537 183 0 0 chr17 23999652 23999756 -61438724 + T-rich Low_complexity Low_complexity 3 106 0 207 0 0 0 chr17 23999756 23999779 -61438701 + (TC)n Simple_repeat Simple_repeat 1 23 0 801 189 0 0 chr17 24000916 24001038 -61437442 + AluJb SINE Alu 157 278 -34 2187 94 39 0 chr17 24001066 24001352 -61437128 - AluSx SINE Alu -15 297 1 1488 129 0 9 chr17 24001720 24001945 -61436535 - AluSg/x SINE Alu -6 304 82 2110 141 3 0 chr17 24003850 24004149 -61434331 - AluSx SINE Alu -2 310 11 298 335 204 11 chr17 24004895 24005086 -61433394 - MIR SINE MIR -18 244 17 560 273 195 5 chr17 24005487 24005868 -61432612 - L1ME4a LINE L1 -19 6102 5599 1538 128 163 4 chr17 24006005 24006263 -61432217 + AluJb SINE Alu 1 299 -13 385 275 9 18 chr17 24006653 24006762 -61431718 - MIR3 SINE MIR -6 202 95 329 211 102 0 chr17 24007362 24007476 -61431004 - L1ME LINE L1 -385 5736 5604 185 302 16 0 chr17 24007742 24007805 -61430675 + L2 LINE L2 2991 3054 -218 193 322 99 33 chr17 24007921 24008042 -61430438 + L2 LINE L2 3185 3313 0 1862 149 0 0 chr17 24008209 24008478 -61430002 + AluJb SINE Alu 29 297 -15 354 327 58 27 chr17 24008678 24008935 -61429545 - L1ME4a LINE L1 -12 6109 5845 211 250 241 9 chr17 24009796 24009908 -61428572 + MIR SINE MIR 88 225 -37 356 236 123 9 chr17 24009999 24010105 -61428375 + MIR SINE MIR 20 137 -71 220 273 136 0 chr17 24010954 24011042 -61427438 + MIR SINE MIR 49 148 -114 664 242 65 16 chr17 24011114 24011300 -61427180 + MIR SINE MIR 3 197 -65 512 141 0 0 chr17 24011301 24011379 -61427101 + MER2 DNA MER2_type 1 78 -267 2386 101 0 0 chr17 24011404 24011700 -61426780 - AluSc SINE Alu -13 296 1 361 217 72 0 chr17 24011700 24011783 -61426697 + MER2 DNA MER2_type 257 345 0 205 256 0 0 chr17 24011783 24011822 -61426658 + MIR SINE MIR 197 235 -27 546 211 35 21 chr17 24012487 24012629 -61425851 - MIR SINE MIR -117 145 2 242 350 80 0 chr17 24013769 24013906 -61424574 - MIR SINE MIR -62 200 53 313 338 83 15 chr17 24015263 24015396 -61423084 + MIR SINE MIR 27 168 -94 226 286 143 0 chr17 24015456 24015526 -61422954 + L2 LINE L2 3169 3248 -24 325 319 133 57 chr17 24015973 24016183 -61422297 + L2 LINE L2 3005 3238 -34 791 153 0 36 chr17 24016183 24016320 -61422160 - FLAM_C SINE Alu -1 132 1 325 319 133 57 chr17 24016320 24016357 -61422123 + L2 LINE L2 3238 3271 -1 223 327 65 9 chr17 24017258 24017365 -61421115 + MIR SINE MIR 33 145 -63 404 268 79 24 chr17 24017513 24017677 -61420803 + MIR SINE MIR 70 242 -20 382 300 23 15 chr17 24018844 24018974 -61419506 + MIR SINE MIR 119 249 -13 220 211 99 0 chr17 24019910 24019981 -61418499 - MIR SINE MIR -70 192 115 198 329 117 22 chr17 24022108 24022245 -61416235 - L2 LINE L2 0 3272 3123 343 286 131 40 chr17 24023407 24023582 -61414898 + L1MC/D LINE L1 5588 5778 -2030 198 143 0 0 chr17 24023738 24023773 -61414707 + (CA)n Simple_repeat Simple_repeat 2 36 0 1530 173 3 71 chr17 24023784 24023970 -61414510 - AluJo SINE Alu -10 302 146 432 0 0 0 chr17 24023970 24024018 -61414462 + (TG)n Simple_repeat Simple_repeat 2 49 0 1530 173 3 71 chr17 24024018 24024155 -61414325 - AluJo SINE Alu -166 146 1 379 331 12 47 chr17 24025117 24025286 -61413194 + MIR3 SINE MIR 35 197 -11 291 233 217 0 chr17 24025451 24025580 -61412900 + MIR SINE MIR 102 258 -4 580 234 80 60 chr17 24025751 24025952 -61412528 - MIR SINE MIR -2 260 56 227 222 74 0 chr17 24028218 24028272 -61410208 + L3 LINE CR1 1513 1570 -7 658 276 158 11 chr17 24030055 24030410 -61408070 - MER113 DNA MER1_type? -55 466 60 2341 87 0 26 chr17 24030713 24031023 -61407457 + AluSx SINE Alu 1 302 -10 200 243 114 29 chr17 24031175 24031245 -61407235 - MER5A DNA MER1_type 0 189 114 576 215 58 35 chr17 24031328 24031500 -61406980 - MER5B DNA MER1_type -2 176 1 307 361 8 23 chr17 24032085 24032215 -61406265 + L3 LINE CR1 166 293 -1284 190 215 138 15 chr17 24032961 24033026 -61405454 - MIR SINE MIR -123 139 67 * 229 366 171 5 chr17 24033024 24033240 -61405240 + L3 LINE CR1 850 1101 -476 219 238 0 0 chr17 24033648 24033690 -61404790 - L2 LINE L2 -17 3296 3255 220 300 0 0 chr17 24033784 24033844 -61404636 - MIR SINE MIR -44 218 159 183 80 0 0 chr17 24033919 24033944 -61404536 + (T)n Simple_repeat Simple_repeat 1 25 0 459 78 324 10 chr17 24033953 24034055 -61404425 - AluSc SINE Alu 0 309 176 1228 176 0 30 chr17 24034056 24034289 -61404191 + THE1-int LTR MaLR 522 747 -833 1428 92 0 0 chr17 24034290 24034464 -61404016 - AluSx SINE Alu -138 174 1 218 346 131 26 chr17 24034621 24034774 -61403706 - MER91A DNA MER1_type -27 169 1 312 294 20 10 chr17 24034785 24034887 -61403593 - MIR SINE MIR -150 112 10 247 356 30 45 chr17 24034946 24035078 -61403402 + L3 LINE CR1 1439 1568 -9 448 270 26 9 chr17 24035646 24035761 -61402719 - MIR SINE MIR -25 237 121 1195 163 23 32 chr17 24035861 24036082 -61402398 + MER20 DNA MER1_type 1 219 0 565 108 0 0 chr17 24036092 24036166 -61402314 + AluS SINE Alu 11 84 -228 1216 268 55 10 chr17 24036248 24036633 -61401847 + MLT1I LTR MaLR 5 406 -3 198 250 90 40 chr17 24036820 24036920 -61401560 - MIR SINE MIR -122 140 36 209 240 0 20 chr17 24037567 24037617 -61400863 + MIR SINE MIR 102 150 -112 945 217 14 47 chr17 24038185 24038397 -61400083 + MIR SINE MIR 31 235 -27 1860 108 8 0 chr17 24039443 24039684 -61398796 - AluSp SINE Alu -70 243 1 403 350 84 9 chr17 24040111 24040337 -61398143 - MIR SINE MIR 0 262 20 194 328 31 0 chr17 24040354 24040418 -61398062 + MIR3 SINE MIR 90 155 -53 2198 113 0 3 chr17 24040515 24040840 -61397640 - AluSx SINE Alu 0 324 1 1647 163 0 98 chr17 24041040 24041100 -61397380 + AluJo SINE Alu 3 67 -245 2477 71 3 0 chr17 24041100 24041397 -61397083 - AluY SINE Alu -12 299 2 1647 163 0 98 chr17 24041397 24041673 -61396807 + AluJo SINE Alu 67 306 -6 363 193 63 79 chr17 24042052 24042241 -61396239 + MIR SINE MIR 31 214 -48 264 260 25 106 chr17 24042330 24042460 -61396020 + MIR SINE MIR 34 165 -43 2282 101 7 7 chr17 24044250 24044546 -61393934 + AluSx SINE Alu 1 296 -16 499 232 45 26 chr17 24044617 24044772 -61393708 - L1ME3A LINE L1 -8 6162 6005 899 219 27 41 chr17 24044862 24045118 -61393362 - L1ME3A LINE L1 -208 5962 5709 917 154 0 0 chr17 24045118 24045248 -61393232 + FLAM_C SINE Alu 1 130 -3 899 219 27 41 chr17 24045248 24045283 -61393197 - L1ME3A LINE L1 -461 5709 5675 2328 124 0 3 chr17 24046186 24046500 -61391980 + AluSq SINE Alu 1 313 0 532 273 98 52 chr17 24046580 24046906 -61391574 - MLT1J LTR MaLR -159 352 12 690 199 106 0 chr17 24047028 24047179 -61391301 + MER7A DNA MER2_type 1 165 -181 449 198 0 0 chr17 24047178 24047259 -61391221 + MER7A DNA MER2_type 266 346 0 * 180 0 0 0 chr17 24047421 24047441 -61391039 + (T)n Simple_repeat Simple_repeat 1 20 0 523 206 169 12 chr17 24047957 24048117 -61390363 + MIR SINE MIR 78 262 0 201 196 43 0 chr17 24048317 24048363 -61390117 + CT-rich Low_complexity Low_complexity 1 48 0 272 153 0 51 chr17 24048376 24048435 -61390045 - L1ME4a LINE L1 -7 6114 6059 888 92 23 0 chr17 24048542 24048672 -61389808 - MER4D LTR ERV1 -28 875 743 * 2354 141 35 45 chr17 24048664 24049126 -61389354 + MER4D LTR ERV1 156 612 -291 1398 146 160 37 chr17 24049135 24049403 -61389077 - AluSx SINE Alu 0 302 2 225 341 49 12 chr17 24049767 24049849 -61388631 - L2 LINE L2 0 3272 3188 226 213 59 125 chr17 24049965 24050101 -61388379 - L2 LINE L2 -261 3011 2885 347 298 46 33 chr17 24051862 24052013 -61386467 - MIR SINE MIR -34 228 76 23 0 0 0 chr17 24052347 24052370 -61386110 + AT_rich Low_complexity Low_complexity 1 23 0 386 279 34 50 chr17 24052871 24053050 -61385430 + MER5B DNA MER1_type 3 178 0 208 297 40 27 chr17 24053052 24053126 -61385354 - MIR3 SINE MIR -14 194 120 822 134 87 0 chr17 24053143 24053270 -61385210 - AluJo/FRAM SINE Alu -11 301 164 1586 174 41 7 chr17 24053272 24053542 -61384938 - AluJb SINE Alu -33 279 1 199 147 29 0 chr17 24053890 24053924 -61384556 + MIR SINE MIR 219 253 -9 325 327 63 22 chr17 24054819 24055042 -61383438 + L1ME LINE L1 5525 5756 -414 711 185 96 0 chr17 24055160 24055306 -61383174 + AluJb SINE Alu 150 309 -3 1348 102 0 31 chr17 24055413 24055609 -61382871 + MER30B DNA MER1_type 1 190 0 754 157 0 0 chr17 24055972 24056087 -61382393 + FLAM_C SINE Alu 1 115 -18 26 0 0 0 chr17 24056089 24056115 -61382365 + AT_rich Low_complexity Low_complexity 1 26 0 213 39 0 0 chr17 24057017 24057043 -61381437 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 926 206 41 32 chr17 24057539 24057758 -61380722 - MIR SINE MIR -1 261 41 509 253 60 24 chr17 24057920 24058086 -61380394 - LTR48B LTR ERV1 0 644 473 757 180 0 30 chr17 24058087 24058254 -61380226 - LTR29 LTR ERV1 -324 298 137 2383 70 0 22 chr17 24058376 24058690 -61379790 - AluY SINE Alu -4 307 1 286 261 17 52 chr17 24058694 24058809 -61379671 - L1MC5 LINE L1 -30 7931 7821 2051 140 24 0 chr17 24058809 24059102 -61379378 - AluSx SINE Alu -12 300 1 601 296 74 0 chr17 24060058 24060261 -61378219 + MIR SINE MIR 28 245 -17 474 249 60 75 chr17 24060283 24060564 -61377916 - L1ME4a LINE L1 -240 5881 5605 378 0 0 0 chr17 24060567 24060609 -61377871 + (TG)n Simple_repeat Simple_repeat 2 43 0 2077 137 0 36 chr17 24060634 24060803 -61377677 - AluSx SINE Alu -17 295 140 2517 84 0 0 chr17 24060803 24061113 -61377367 - AluSg SINE Alu 0 310 1 2077 137 0 36 chr17 24061113 24061249 -61377231 - AluSx SINE Alu -172 140 1 1952 129 20 10 chr17 24061444 24061738 -61376742 - AluSx SINE Alu -15 297 1 1006 237 141 42 chr17 24061751 24062185 -61376295 - L2 LINE L2 -19 3294 2818 2274 101 20 0 chr17 24063100 24063397 -61375083 + AluSx SINE Alu 1 303 -9 748 162 81 27 chr17 24063497 24063645 -61374835 - AluJb SINE Alu -24 288 133 632 261 116 14 chr17 24064996 24065203 -61373277 + MIR SINE MIR 10 237 -25 23 0 0 0 chr17 24065203 24065226 -61373254 + AT_rich Low_complexity Low_complexity 1 23 0 486 310 0 32 chr17 24065228 24065386 -61373094 - L2 LINE L2 0 3313 3161 637 157 20 10 chr17 24065387 24065489 -61372991 + FLAM_A SINE Alu 19 121 -21 357 306 86 19 chr17 24065493 24065702 -61372778 - L2 LINE L2 -138 3175 2953 292 280 64 32 chr17 24066628 24066753 -61371727 - L2 LINE L2 -1 3271 3143 4232 95 2 0 chr17 24067395 24067944 -61370536 - MER41A LTR ERV1 -4 550 1 342 254 130 22 chr17 24067977 24068115 -61370365 - MIR3 SINE MIR -54 154 2 2009 152 0 16 chr17 24068282 24068591 -61369889 - AluJo SINE Alu -8 304 1 287 274 36 12 chr17 24068656 24068740 -61369740 + L2 LINE L2 3169 3254 -18 466 267 22 72 chr17 24068839 24069019 -61369461 + MIR SINE MIR 16 186 -76 226 250 120 43 chr17 24069052 24069144 -61369336 + MIR SINE MIR 164 262 0 303 202 225 0 chr17 24069337 24069426 -61369054 + MIR SINE MIR 37 145 -63 407 188 0 104 chr17 24069500 24069692 -61368788 + CT-rich Low_complexity Low_complexity 3 174 0 246 182 0 99 chr17 24069716 24069837 -61368643 + CT-rich Low_complexity Low_complexity 2 110 0 220 258 320 6 chr17 24070600 24070778 -61367702 + L2 LINE L2 2697 2930 -384 357 199 114 125 chr17 24070851 24070954 -61367526 + L2 LINE L2 3139 3242 -71 222 37 0 0 chr17 24070954 24070981 -61367499 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 1846 135 51 4 chr17 24070984 24071258 -61367222 - AluSx SINE Alu -25 287 1 357 199 114 125 chr17 24071258 24071326 -61367154 + L2 LINE L2 3244 3312 -1 294 267 192 62 chr17 24071828 24071974 -61366506 + MIR3 SINE MIR 31 195 -13 1197 102 6 11 chr17 24072255 24072431 -61366049 - L1PB3 LINE L1 -15 6139 5965 184 324 141 41 chr17 24072473 24072643 -61365837 + MIR SINE MIR 28 214 -48 763 142 0 0 chr17 24072717 24072823 -61365657 + FLAM_C SINE Alu 2 107 -36 23 33 0 0 chr17 24072823 24072853 -61365627 + AT_rich Low_complexity Low_complexity 1 30 0 411 283 118 106 chr17 24073051 24073465 -61365015 + L1ME4a LINE L1 5638 6056 -65 2442 80 17 0 chr17 24073879 24074180 -61364300 + AluSp SINE Alu 1 306 -7 328 248 41 21 chr17 24074292 24074437 -61364043 + LTR16A LTR ERVL 16 163 -287 1984 134 38 3 chr17 24074805 24075095 -61363385 - AluSx SINE Alu -12 300 1 257 351 0 0 chr17 24075101 24075175 -61363305 - L2 LINE L2 -2 3311 3238 279 230 140 17 chr17 24075547 24075681 -61362799 - MIR SINE MIR -58 150 3 400 317 107 53 chr17 24076309 24076552 -61361928 + MIR SINE MIR 4 259 -3 383 312 7 28 chr17 24077370 24077511 -61360969 + MIR3 SINE MIR 15 152 -56 393 167 0 0 chr17 24077654 24077726 -61360754 - MSTB1 LTR MaLR 0 432 361 2321 96 0 3 chr17 24077726 24078028 -61360452 + AluSx SINE Alu 1 301 -11 969 110 0 22 chr17 24078040 24078176 -61360304 + FLAM_C SINE Alu 1 133 -10 320 24 71 0 chr17 24078176 24078218 -61360262 - MSTB LTR MaLR -65 367 323 298 165 25 51 chr17 24078232 24078311 -61360169 - AluS SINE Alu -2 299 223 * 1671 194 24 21 chr17 24078274 24078610 -61359870 - MSTB LTR MaLR -89 337 1 345 273 151 7 chr17 24078718 24078857 -61359623 - L1ME3A LINE L1 -2 6168 6010 431 185 7 89 chr17 24078938 24079073 -61359407 - L1ME3A LINE L1 -1988 5820 5697 656 164 49 8 chr17 24079129 24079251 -61359229 + FLAM_C SINE Alu 1 127 -16 2464 73 0 0 chr17 24079257 24079544 -61358936 + AluSc SINE Alu 1 287 -22 208 326 0 22 chr17 24080018 24080110 -61358370 + CT-rich Low_complexity Low_complexity 2 91 0 207 176 0 0 chr17 24080568 24080602 -61357878 + (TG)n Simple_repeat Simple_repeat 1 34 0 242 283 120 36 chr17 24080639 24080835 -61357645 + MIR SINE MIR 20 261 -1 814 92 8 25 chr17 24081081 24081201 -61357279 + FLAM_C SINE Alu 26 143 0 261 320 0 0 chr17 24081211 24081286 -61357194 + Charlie4 DNA MER1_type 1877 1951 -10 225 171 0 0 chr17 24081466 24081501 -61356979 - Alu SINE Alu -235 68 34 1882 151 14 0 chr17 24081501 24081786 -61356694 + AluSx SINE Alu 13 301 -11 1179 165 0 100 chr17 24081798 24082059 -61356421 - MER46A DNA MER2_type 0 236 2 362 192 0 26 chr17 24082803 24082881 -61355599 - MIR SINE MIR -151 111 36 1448 160 0 0 chr17 24082986 24083198 -61355282 - AluJb SINE Alu -17 295 84 594 326 19 30 chr17 24083903 24084167 -61354313 - MIR SINE MIR -1 261 1 201 225 0 0 chr17 24084199 24084239 -61354241 + (CAGC)n Simple_repeat Simple_repeat 1 40 0 377 235 29 67 chr17 24084516 24084636 -61353844 + MER33 DNA MER1_type 1 86 -97 367 315 172 19 chr17 24084670 24085259 -61353221 + L2 LINE L2 2512 3251 -62 289 316 71 6 chr17 24085839 24086007 -61352473 - MIR SINE MIR -71 191 13 211 279 0 16 chr17 24086044 24086105 -61352375 + MIR SINE MIR 90 149 -113 858 101 78 0 chr17 24087127 24087256 -61351224 + MER85 DNA T2_type 1 139 0 3156 108 75 4 chr17 24087270 24087762 -61350718 + MER1A DNA MER1_type 1 527 0 1508 188 20 32 chr17 24087781 24088126 -61350354 - L1MD3 LINE L1 0 7995 7655 1466 183 30 55 chr17 24088169 24088452 -61350028 - L1MC3 LINE L1 -643 7142 6870 216 0 0 0 chr17 24088452 24088476 -61350004 + (TG)n Simple_repeat Simple_repeat 2 25 0 1466 183 30 55 chr17 24088476 24088590 -61349890 - L1MC3 LINE L1 -915 6870 6755 603 166 93 14 chr17 24088630 24088769 -61349711 - L1MB3 LINE L1 -1 6182 6033 1947 138 6 29 chr17 24089148 24089460 -61349020 - AluJo SINE Alu -7 305 1 408 264 57 0 chr17 24090510 24090616 -61347864 + MIR3 SINE MIR 67 178 -30 190 279 33 16 chr17 24091491 24091552 -61346928 + L2 LINE L2 3211 3272 0 552 263 46 0 chr17 24092340 24092515 -61345965 + MER3 DNA MER1_type 25 207 -2 194 242 0 48 chr17 24092675 24092737 -61345743 - L2 LINE L2 -329 2984 2926 256 319 0 0 chr17 24094533 24094602 -61343878 - L2 LINE L2 0 3313 3245 209 33 33 0 chr17 24094774 24094804 -61343676 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2088 122 0 0 chr17 24094806 24095084 -61343396 - AluSx SINE Alu -34 278 1 327 216 216 0 chr17 24095144 24095246 -61343234 + L2 LINE L2 3190 3313 0 271 250 0 0 chr17 24095820 24095884 -61342596 + MIR SINE MIR 57 120 -142 437 361 89 7 chr17 24095896 24096176 -61342304 + L2 LINE L2 2432 2734 -580 186 21 64 85 chr17 24096183 24096230 -61342250 + (TTTCC)n Simple_repeat Simple_repeat 5 50 0 1417 178 35 8 chr17 24096237 24096495 -61341985 - AluJo SINE Alu -47 265 1 388 311 143 32 chr17 24096507 24096901 -61341579 + L2 LINE L2 2732 3179 -134 2404 100 3 6 chr17 24096921 24097232 -61341248 - AluSq SINE Alu -3 310 1 343 277 12 0 chr17 24097593 24097676 -61340804 - MLT1K LTR MaLR -324 264 181 331 226 36 109 chr17 24098023 24098160 -61340320 - L1ME4a LINE L1 -23 6098 5972 288 295 23 39 chr17 24098228 24098357 -61340123 - MIR SINE MIR -14 248 122 1728 186 7 7 chr17 24098370 24098665 -61339815 - AluJo SINE Alu -17 295 1 368 241 168 7 chr17 24098698 24098835 -61339645 - L1ME4a LINE L1 -7 6114 5956 301 314 16 33 chr17 24099903 24100024 -61338456 + MIR SINE MIR 11 129 -133 672 145 8 40 chr17 24100254 24100378 -61338102 + FLAM_C SINE Alu 5 124 -19 213 196 59 0 chr17 24100800 24100851 -61337629 + MIR3 SINE MIR 124 177 -31 1424 227 34 3 chr17 24102448 24102769 -61335711 + MER58B DNA MER1_type 3 333 -8 270 295 266 0 chr17 24103246 24103385 -61335095 + MIR SINE MIR 81 256 -6 422 278 9 35 chr17 24103781 24103896 -61334584 - MER5B DNA MER1_type -66 112 1 314 260 0 0 chr17 24103902 24103975 -61334505 - MIR3 SINE MIR -49 159 87 243 308 177 0 chr17 24106085 24106215 -61332265 + Charlie8 DNA MER1_type 19 171 -2246 1196 134 106 0 chr17 24106331 24106548 -61331932 + MER57A LTR ERV1 1 240 -163 205 355 9 45 chr17 24107845 24107955 -61330525 + L2 LINE L2 3080 3185 -87 3832 148 10 2 chr17 24107990 24108622 -61329858 - MER41B LTR ERV1 0 624 1 1521 237 144 5 chr17 24108737 24109159 -61329321 - MLT1E2 LTR MaLR -8 618 138 1683 129 25 53 chr17 24109177 24109495 -61328985 - Tigger7 DNA MER2_type -1 2586 2278 1375 173 4 43 chr17 24109498 24109752 -61328728 - Tigger7 DNA MER2_type -2212 275 32 274 186 34 0 chr17 24109860 24109919 -61328561 + MIR SINE MIR 85 145 -117 310 227 89 0 chr17 24111449 24111567 -61326913 - MIR SINE MIR -61 147 40 189 344 44 0 chr17 24111868 24111958 -61326522 - MIR SINE MIR -149 113 20 835 229 36 0 chr17 24112261 24112453 -61326027 + MIR SINE MIR 44 242 -20 2001 160 3 6 chr17 24112537 24112850 -61325630 + AluSx SINE Alu 1 312 0 253 292 10 20 chr17 24113525 24113640 -61324840 + MIR SINE MIR 44 155 -60 254 153 17 68 chr17 24113684 24113743 -61324737 - MSTA LTR MaLR 0 428 373 1536 112 0 0 chr17 24113759 24113956 -61324524 - AluSg SINE Alu -58 252 56 1637 135 102 27 chr17 24113958 24114291 -61324189 - MSTA LTR MaLR -41 387 30 287 277 109 89 chr17 24114291 24114754 -61323726 + L2 LINE L2 2778 3247 -25 187 310 42 0 chr17 24115090 24115147 -61323333 + MIR SINE MIR 89 151 -111 1239 188 31 0 chr17 24115147 24115376 -61323104 - MER46A DNA MER2_type 0 236 1 187 310 42 0 chr17 24115376 24115389 -61323091 + MIR SINE MIR 151 162 -100 580 283 126 12 chr17 24116279 24116526 -61321954 - MLT1I LTR MaLR -1 408 134 291 56 0 0 chr17 24117145 24117181 -61321299 - U2 snRNA snRNA -152 36 1 2221 124 3 0 chr17 24117885 24118183 -61320297 - AluSx SINE Alu -13 299 1 321 265 127 30 chr17 24118208 24118374 -61320106 + MIR SINE MIR 45 226 -36 2336 118 0 0 chr17 24119816 24120120 -61318360 - AluSx SINE Alu -8 304 1 304 277 12 12 chr17 24121825 24121908 -61316572 - MER5A DNA MER1_type -5 184 102 262 250 12 38 chr17 24122195 24122275 -61316205 - MIR SINE MIR -165 97 20 308 329 42 36 chr17 24122343 24122510 -61315970 + MIR SINE MIR 30 197 -65 1073 264 59 30 chr17 24122946 24123514 -61314966 - L1MC4a LINE L1 0 6162 5574 312 355 35 12 chr17 24123966 24124135 -61314345 - L2 LINE L2 -213 3059 2887 264 224 34 56 chr17 24124380 24124487 -61313993 + MIR SINE MIR 43 147 -81 248 285 179 8 chr17 24125792 24125915 -61312565 - MIR SINE MIR -6 256 113 1660 229 40 6 chr17 24126682 24127035 -61311445 - MLT1A1 LTR MaLR 0 365 1 387 285 66 0 chr17 24127045 24127182 -61311298 + MIR SINE MIR 47 192 -70 189 313 157 0 chr17 24127823 24127906 -61310574 - MIR SINE MIR -86 176 81 261 188 0 31 chr17 24128058 24128122 -61310358 - MER103 DNA DNA -97 69 8 511 336 67 5 chr17 24128298 24128521 -61309959 - MIR SINE MIR -6 256 20 678 277 173 9 chr17 24128939 24129257 -61309223 + MER113 DNA MER1_type? 1 370 -151 229 329 13 13 chr17 24129645 24129721 -61308759 + L2 LINE L2 3167 3242 -30 200 326 161 22 chr17 24129757 24130030 -61308450 - L2 LINE L2 -21 3292 2982 397 282 92 8 chr17 24130526 24130657 -61307823 - MIR SINE MIR -83 179 38 191 333 15 0 chr17 24130874 24130940 -61307540 - MIR SINE MIR -90 172 106 5898 158 76 38 chr17 24131938 24132223 -61306257 - Tigger3b DNA MER2_type -1798 1230 957 2073 119 3 0 chr17 24132223 24132508 -61305972 + AluSx SINE Alu 1 286 -26 5898 158 76 38 chr17 24132508 24133100 -61305380 - Tigger3b DNA MER2_type -2071 957 294 2193 108 0 19 chr17 24133100 24133415 -61305065 + AluSx SINE Alu 1 309 -3 5898 158 76 38 chr17 24133415 24133721 -61304759 - Tigger3b DNA MER2_type -2734 294 1 333 246 99 24 chr17 24133721 24133860 -61304620 - MIR SINE MIR -48 160 9 261 313 232 0 chr17 24134553 24134665 -61303815 - MIR3 SINE MIR -26 182 45 289 216 0 0 chr17 24136089 24136140 -61302340 + MER81 DNA DNA 39 89 -25 386 309 81 36 chr17 24137129 24137352 -61301128 - MIR SINE MIR -20 242 10 195 207 155 0 chr17 24137858 24137916 -61300564 + MER5B DNA MER1_type 112 178 0 349 270 111 0 chr17 24138150 24138276 -61300204 - MIR3 SINE MIR -30 178 39 1734 118 26 22 chr17 24138951 24139222 -61299258 + AluJo SINE Alu 6 277 -35 683 246 12 36 chr17 24139516 24139683 -61298797 + MER63 DNA MER1_type 1 789 -47 2002 121 0 0 chr17 24139799 24140080 -61298400 - AluSx SINE Alu -31 281 1 473 218 78 14 chr17 24141220 24141362 -61297118 + MIR SINE MIR 52 202 -60 426 340 13 19 chr17 24141492 24141651 -61296829 - MIR3 SINE MIR -39 169 12 612 252 64 41 chr17 24141880 24142098 -61296382 + MIR SINE MIR 7 229 -33 275 390 68 10 chr17 24143234 24143439 -61295041 + MIR SINE MIR 12 228 -34 1323 152 55 82 chr17 24143550 24143878 -61294602 - MER33 DNA MER1_type -2 322 4 217 283 329 0 chr17 24144039 24144191 -61294289 - MIR SINE MIR -14 248 47 2204 161 76 24 chr17 24145117 24145538 -61292942 - MER65A LTR ERV1 0 445 3 2760 114 58 5 chr17 24146240 24146652 -61291828 - MER61C LTR ERV1 0 434 1 1922 132 14 10 chr17 24146756 24147051 -61291429 - AluSx SINE Alu -15 297 2 350 283 75 68 chr17 24147057 24147322 -61291158 - L1ME4a LINE L1 -188 5933 5667 464 268 6 93 chr17 24147482 24147665 -61290815 - MER5B DNA MER1_type -8 170 4 1210 297 80 43 chr17 24148604 24149422 -61289058 - HAL1 LINE L1 -655 1852 1005 2117 118 0 13 chr17 24150473 24150778 -61287702 - AluSq SINE Alu -12 301 1 203 228 79 89 chr17 24151313 24151414 -61287066 + MIR3 SINE MIR 61 160 -48 236 214 71 0 chr17 24151417 24151487 -61286993 - MER58C DNA MER1_type -3 212 138 476 242 27 40 chr17 24151513 24151662 -61286818 - MER58C DNA MER1_type -55 160 140 352 289 0 0 chr17 24151723 24151814 -61286666 + MER58C DNA MER1_type 18 108 -107 913 121 23 0 chr17 24151814 24151946 -61286534 - AluJo SINE Alu -177 135 1 376 241 147 0 chr17 24152186 24152302 -61286178 - MER58C DNA MER1_type -14 201 69 2296 99 3 0 chr17 24152344 24152647 -61285833 - AluSx SINE Alu -8 304 1 1954 113 48 3 chr17 24152655 24152948 -61285532 - AluSg SINE Alu -4 306 1 293 256 11 22 chr17 24153371 24153461 -61285019 + L2 LINE L2 3184 3272 0 251 273 26 0 chr17 24153772 24153849 -61284631 - MIR3 SINE MIR -37 171 93 352 298 8 48 chr17 24155747 24155871 -61282609 + MER5A DNA MER1_type 63 181 -8 244 409 35 0 chr17 24158324 24158439 -61280041 - L2 LINE L2 -9 3263 3145 367 159 72 0 chr17 24159132 24159201 -61279279 + AluSp/q SINE Alu 219 292 -11 23 33 0 0 chr17 24159254 24159284 -61279196 + AT_rich Low_complexity Low_complexity 1 30 0 327 187 30 15 chr17 24159921 24160055 -61278425 + CT-rich Low_complexity Low_complexity 2 137 0 490 286 88 12 chr17 24161294 24161465 -61277015 - MIR SINE MIR -50 212 29 219 222 0 0 chr17 24161492 24161537 -61276943 - L2 LINE L2 -14 3258 3214 381 271 56 0 chr17 24161540 24161647 -61276833 + L1M4 LINE L1 2703 2815 -3331 1251 139 14 42 chr17 24161647 24161863 -61276617 + MER1B DNA MER1_type 130 339 0 663 323 16 0 chr17 24162322 24162514 -61275966 - MIR SINE MIR -28 234 40 1377 162 129 42 chr17 24162527 24162861 -61275619 - L1M3 LINE L1 -388 5795 5433 1250 279 159 7 chr17 24163280 24163326 -61275154 - L1ME3 LINE L1 -3 6159 6121 1795 148 7 13 chr17 24163326 24163630 -61274850 - AluJo SINE Alu -10 302 1 1250 279 159 7 chr17 24163630 24164081 -61274399 - L1ME3 LINE L1 -41 6121 5563 1739 169 0 25 chr17 24164081 24164401 -61274079 - AluJb SINE Alu 0 312 1 1250 279 159 7 chr17 24164401 24164469 -61274011 - L1ME3 LINE L1 -599 5563 5507 323 228 76 0 chr17 24165214 24165293 -61273187 + MIR3 SINE MIR 70 154 -54 216 0 0 0 chr17 24166008 24166032 -61272448 + (TCCTG)n Simple_repeat Simple_repeat 5 28 0 503 286 164 9 chr17 24166116 24166336 -61272144 + MIR SINE MIR 9 262 0 208 267 114 19 chr17 24166501 24166606 -61271874 - MIR SINE MIR -89 173 59 579 180 0 2 chr17 24167611 24167720 -61270760 + MIR SINE MIR 45 152 -56 280 129 77 0 chr17 24167806 24167866 -61270614 - MLT1D LTR MaLR -49 456 356 384 250 73 22 chr17 24168280 24168416 -61270064 - MIR SINE MIR -72 190 48 1677 170 85 85 chr17 24168547 24168734 -61269746 - MLT1D LTR MaLR -49 456 270 1795 169 0 10 chr17 24168734 24169047 -61269433 + AluJb SINE Alu 1 310 -2 1677 170 85 85 chr17 24169047 24169295 -61269185 - MLT1D LTR MaLR -234 271 21 466 214 11 112 chr17 24169412 24169599 -61268881 - L1MC4a LINE L1 -1954 5854 5687 1229 186 58 29 chr17 24169636 24169957 -61268523 + AluJo SINE Alu 1 329 0 241 345 24 0 chr17 24170414 24170498 -61267982 - MIR SINE MIR -130 132 47 226 333 0 24 chr17 24170649 24170733 -61267747 + MER102b DNA MER1_type 4 85 -256 516 232 66 38 chr17 24170733 24170944 -61267536 - L1MC5 LINE L1 -44 7917 7701 1752 173 0 10 chr17 24170951 24171240 -61267240 - AluJb SINE Alu -26 286 1 678 252 47 68 chr17 24171280 24171514 -61266966 + MER102b DNA MER1_type 106 334 -7 581 285 77 14 chr17 24171712 24171919 -61266561 - MIR SINE MIR -11 251 32 197 328 46 8 chr17 24172507 24172638 -61265842 + L2 LINE L2 3132 3267 -46 210 150 0 0 chr17 24173791 24173831 -61264649 + (CCCCCT)n Simple_repeat Simple_repeat 2 41 0 1426 153 12 20 chr17 24174045 24174204 -61264276 - AluJo SINE Alu -18 294 136 2054 114 0 3 chr17 24174204 24174503 -61263977 - AluSc SINE Alu -11 298 1 1426 153 12 20 chr17 24174503 24174597 -61263883 - AluJo SINE Alu -176 136 43 515 295 46 31 chr17 24174611 24174872 -61263608 - Tigger8 DNA MER2_type -186 480 216 2423 96 60 8 chr17 24175793 24176157 -61262323 + L1PA11 LINE L1 5782 6164 -10 350 98 0 1 chr17 24176175 24176421 -61262059 + AluSq SINE Alu 17 297 -4 21 0 0 0 chr17 24176431 24176452 -61262028 + AT_rich Low_complexity Low_complexity 1 21 0 579 251 54 18 chr17 24177109 24177276 -61261204 + MIR SINE MIR 20 192 -70 380 228 51 146 chr17 24177287 24177389 -61261091 + Charlie8 DNA MER1_type 1 111 -2306 663 238 0 0 chr17 24177389 24177511 -61260969 + FLAM_A SINE Alu 1 122 -11 380 228 51 146 chr17 24177511 24177662 -61260818 + Charlie8 DNA MER1_type 111 230 -2187 302 292 87 104 chr17 24178591 24178957 -61259523 + L2 LINE L2 2906 3265 -7 237 315 24 15 chr17 24179242 24179360 -61259120 + MIR SINE MIR 15 132 -76 273 256 128 0 chr17 24182090 24182176 -61256304 - MIR SINE MIR -122 140 44 442 313 53 40 chr17 24182193 24182420 -61256060 - L2 LINE L2 -1 3312 3083 418 311 90 24 chr17 24182473 24182640 -61255840 + MER5B DNA MER1_type 1 178 0 291 258 82 10 chr17 24182640 24182737 -61255743 - L2 LINE L2 -504 2810 2707 684 278 28 0 chr17 24182741 24182917 -61255563 + MIR SINE MIR 79 259 -3 194 236 180 34 chr17 24182931 24183020 -61255460 - L2 LINE L2 -608 2706 2605 243 61 0 0 chr17 24183209 24183242 -61255238 + (GGGA)n Simple_repeat Simple_repeat 2 34 0 323 266 59 53 chr17 24184615 24184784 -61253696 + MER5A DNA MER1_type 14 183 -6 2014 127 0 34 chr17 24184787 24185111 -61253369 + AluSq SINE Alu 1 313 0 530 276 6 26 chr17 24186766 24186922 -61251558 - MER103 DNA DNA -12 154 2 717 250 211 28 chr17 24186980 24187340 -61251140 + L2 LINE L2 2888 3313 0 249 257 40 0 chr17 24188394 24188468 -61250012 - L2 LINE L2 -60 3212 3136 198 215 114 13 chr17 24188928 24189007 -61249473 + MIR SINE MIR 64 150 -58 512 276 52 6 chr17 24189387 24189561 -61248919 - MIR SINE MIR -70 192 11 316 325 65 7 chr17 24190559 24190713 -61247767 - MIR3 SINE MIR -26 182 20 288 307 98 49 chr17 24191261 24191505 -61246975 + L2 LINE L2 3052 3307 -6 302 295 13 0 chr17 24191657 24191735 -61246745 + MIR SINE MIR 14 92 -170 180 111 0 0 chr17 24192264 24192291 -61246189 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 295 241 72 0 chr17 24192301 24192384 -61246096 - L2 LINE L2 -35 3237 3149 422 294 160 16 chr17 24192457 24192651 -61245829 + MIR SINE MIR 15 236 -26 377 348 120 0 chr17 24193783 24193967 -61244513 + MIR SINE MIR 2 207 -55 2051 111 10 0 chr17 24193977 24194265 -61244215 + AluSg SINE Alu 1 291 -19 1931 124 17 17 chr17 24194394 24194693 -61243787 - AluSx SINE Alu -13 299 1 2241 102 0 0 chr17 24195163 24195468 -61243012 + AluSx SINE Alu 1 305 -7 233 374 144 0 chr17 24196814 24196953 -61241527 + MIR SINE MIR 95 253 -9 1634 189 3 7 chr17 24197518 24197825 -61240655 - AluJo SINE Alu -6 306 1 888 240 114 70 chr17 24199448 24199894 -61238586 - MER113 DNA MER1_type? -42 479 14 280 344 0 41 chr17 24200269 24200391 -61238089 + L2 LINE L2 2458 2574 -740 191 402 10 0 chr17 24200860 24200957 -61237523 + L2 LINE L2 3200 3297 -16 1233 286 40 17 chr17 24203190 24203717 -61234763 - L1MC4 LINE L1 -2025 6017 5479 194 250 204 38 chr17 24208432 24208564 -61229916 + MIR SINE MIR 90 243 -19 326 230 14 93 chr17 24209173 24209312 -61229168 - L1 LINE L1 -2784 3362 3235 2082 157 21 3 chr17 24209621 24209959 -61228521 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 24210039 24210064 -61228416 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1666 138 110 51 chr17 24210406 24210760 -61227720 - THE1C LTR MaLR 0 375 1 1972 138 0 3 chr17 24211662 24211967 -61226513 + AluSc SINE Alu 1 304 -5 1504 195 19 7 chr17 24212351 24212658 -61225822 + AluSx SINE Alu 1 311 -1 1061 198 0 0 chr17 24212732 24212924 -61225556 + AluSg/x SINE Alu 105 296 -16 570 225 0 23 chr17 24213577 24213706 -61224774 - L2 LINE L2 0 3313 3188 2082 100 7 3 chr17 24214203 24214493 -61223987 - AluSg SINE Alu -19 291 1 1743 132 0 4 chr17 24215202 24215459 -61223021 - AluSq SINE Alu -19 294 39 25 0 0 0 chr17 24215852 24215877 -61222603 + AT_rich Low_complexity Low_complexity 1 25 0 2024 92 0 7 chr17 24216204 24216485 -61221995 + AluY SINE Alu 1 279 -32 1209 189 4 17 chr17 24216516 24216749 -61221731 - AluJb SINE Alu -17 295 66 278 136 0 0 chr17 24216749 24216793 -61221687 - AluJo/FLAM SINE Alu -190 112 69 842 104 0 0 chr17 24217282 24217397 -61221083 + AluSq SINE Alu 1 115 -197 2285 185 65 7 chr17 24217407 24217855 -61220625 + MER9 LTR ERVK 38 511 0 5491 206 28 31 chr17 24217856 24219217 -61219263 + HERVK14 LTR ERVK 4 1381 -4564 5755 156 86 39 chr17 24219217 24220426 -61218054 - MER11A LTR ERVK 0 1266 1 7614 72 1 0 chr17 24220427 24221422 -61217058 - HERVK11 LTR ERVK -1 7952 6957 * 26995 89 6 2 chr17 24221407 24228079 -61210401 - HERVK11 LTR ERVK -1186 6767 1 4239 163 27 41 chr17 24228079 24228938 -61209542 - MER11C LTR ERVK 0 1071 225 1890 77 0 0 chr17 24229333 24229567 -61208913 - MER11B LTR ERVK -1002 234 1 28236 130 4 1 chr17 24229567 24233622 -61204858 + HERVK9 LTR ERVK 1121 5186 -730 566 301 5 19 chr17 24233593 24233809 -61204671 + HERVK9 LTR ERVK 5801 6013 -1739 * 3084 102 0 26 chr17 24233824 24234254 -61204226 + HERVK9 LTR ERVK 5183 5601 -315 1874 254 27 27 chr17 24234352 24235271 -61203209 + HERVK9 LTR ERVK 5635 5916 0 2268 186 62 9 chr17 24235278 24235730 -61202750 + MER9 LTR ERVK 34 509 -2 1111 168 20 10 chr17 24235732 24235993 -61202487 + AluSq SINE Alu 109 371 0 1346 109 0 26 chr17 24236031 24236223 -61202257 + AluSx SINE Alu 3 189 -123 818 144 30 8 chr17 24236225 24236357 -61202123 - AluSq SINE Alu -147 166 32 21 0 0 0 chr17 24237542 24237563 -61200917 + AT_rich Low_complexity Low_complexity 1 21 0 331 266 97 26 chr17 24237584 24237738 -61200742 - Tigger8 DNA MER2_type -165 501 337 2381 101 0 0 chr17 24237902 24238208 -61200272 - AluY SINE Alu -5 306 1 243 0 0 0 chr17 24238592 24238619 -61199861 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 318 117 45 chr17 24238631 24238810 -61199670 - MIR SINE MIR -51 211 20 230 313 10 21 chr17 24238854 24238950 -61199530 + Tigger8 DNA MER2_type 141 235 -431 1750 165 7 10 chr17 24238960 24239251 -61199229 + AluJb SINE Alu 1 290 -22 2120 132 0 0 chr17 24239545 24239832 -61198648 - AluSc SINE Alu -22 287 1 2213 109 7 0 chr17 24239971 24240264 -61198216 - AluSc SINE Alu -14 295 1 2026 129 0 7 chr17 24240695 24240981 -61197499 + AluSg SINE Alu 3 286 -24 36 53 0 0 chr17 24242361 24242418 -61196062 + AT_rich Low_complexity Low_complexity 1 57 0 376 276 113 13 chr17 24242561 24242874 -61195606 - L1ME4a LINE L1 -194 5927 5571 213 39 0 0 chr17 24243041 24243067 -61195413 + (CA)n Simple_repeat Simple_repeat 1 26 0 210 367 140 10 chr17 24243973 24244180 -61194300 + L2 LINE L2 987 1220 -2094 2058 132 0 0 chr17 24244192 24244507 -61193973 + AluSg SINE Alu 2 316 0 2172 117 0 0 chr17 24244691 24244981 -61193499 - AluY SINE Alu -21 290 1 234 269 0 0 chr17 24245034 24245086 -61193394 + LTR30 LTR ERV1 1 52 -670 805 128 231 213 chr17 24245125 24245553 -61192927 + LTR12 LTR ERV1 48 483 -231 5874 133 9 36 chr17 24245570 24246540 -61191940 + HERV9 LTR ERV1 54 997 -7402 * 21891 111 10 5 chr17 24246536 24250896 -61187584 + HERV9 LTR ERV1 1155 5613 -2786 16539 115 5 15 chr17 24250888 24251255 -61187225 + HERV9 LTR ERV1 5972 6341 -2058 * 2062 53 16 0 chr17 24251255 24251500 -61186980 - L1PA5 LINE L1 -6 6148 5900 16539 115 5 15 chr17 24251500 24253585 -61184895 + HERV9 LTR ERV1 6341 8399 0 816 164 79 141 chr17 24253585 24253889 -61184591 + LTR12 LTR ERV1 1 285 -429 355 178 33 22 chr17 24253890 24253980 -61184500 + LTR30 LTR ERV1 553 643 -79 656 130 0 0 chr17 24253982 24254082 -61184398 + LTR12 LTR ERV1 615 714 0 226 309 147 33 chr17 24254233 24254505 -61183975 + L2 LINE L2 1791 2093 -1221 382 256 78 0 chr17 24254507 24254597 -61183883 - MER117 DNA MER1_type -97 100 4 725 161 17 0 chr17 24255122 24255240 -61183240 + FLAM_A SINE Alu 20 139 -3 311 326 121 23 chr17 24255340 24255555 -61182925 + MIR SINE MIR 3 238 -24 2072 114 7 3 chr17 24255639 24255929 -61182551 + AluSc SINE Alu 1 291 -18 2106 110 0 14 chr17 24256059 24256349 -61182131 - AluSx SINE Alu -26 286 1 319 339 15 39 chr17 24256532 24256662 -61181818 - L2 LINE L2 -1 3271 3145 219 362 35 26 chr17 24256748 24256864 -61181616 - L2 LINE L2 -177 3095 2979 4443 217 52 64 chr17 24257138 24259015 -61179465 - L1ME1 LINE L1 -5 6161 4261 4562 81 242 0 chr17 24259015 24259680 -61178800 + LTR12 LTR ERV1 1 826 0 4443 217 52 64 chr17 24259680 24259727 -61178753 - L1ME1 LINE L1 -1905 4261 4215 369 98 0 216 chr17 24259727 24259829 -61178651 + MADE1 DNA Mariner 1 80 0 4443 217 52 64 chr17 24259829 24260131 -61178349 - L1ME1 LINE L1 -1951 4215 3976 277 258 40 53 chr17 24260177 24260328 -61178152 - L1MD3 LINE L1 -14 7981 7833 245 257 53 71 chr17 24260500 24260613 -61177867 - MIR SINE MIR -80 128 18 839 171 0 7 chr17 24260795 24260935 -61177545 + FRAM SINE Alu 23 161 -15 1876 145 3 14 chr17 24260938 24261074 -61177406 + AluSx SINE Alu 1 137 -175 2138 124 7 10 chr17 24261074 24261373 -61177107 + AluSp SINE Alu 1 298 -15 1876 145 3 14 chr17 24261373 24261525 -61176955 + AluSx SINE Alu 137 286 -26 423 0 0 0 chr17 24261532 24261579 -61176901 + (TA)n Simple_repeat Simple_repeat 2 48 0 751 171 0 0 chr17 24261688 24261805 -61176675 + AluSq SINE Alu 117 233 -80 670 95 0 0 chr17 24261805 24261889 -61176591 - AluS SINE Alu -215 97 14 7446 58 37 0 chr17 24261899 24262904 -61175576 - L1PA8 LINE L1 -3 6169 5152 469 329 74 0 chr17 24263231 24263380 -61175100 - L2 LINE L2 0 3272 3113 1924 218 7 9 chr17 24264368 24264817 -61173663 + L1MC2 LINE L1 4759 5206 -940 2003 126 4 0 chr17 24264818 24265128 -61173352 + AluSg SINE Alu 5 315 0 3120 185 91 10 chr17 24265128 24265821 -61172659 + L1MC2 LINE L1 5596 6344 0 301 240 130 0 chr17 24266014 24266114 -61172366 + L1ME4a LINE L1 5971 6083 -38 220 211 26 0 chr17 24266366 24266442 -61172038 + (CTTA)n Simple_repeat Simple_repeat 2 79 0 339 125 0 28 chr17 24268195 24268267 -61170213 - L1MD2 LINE L1 -2 6357 6288 888 178 11 23 chr17 24268268 24268442 -61170038 + FRAM SINE Alu 1 172 -4 4713 171 42 12 chr17 24268464 24268728 -61169752 + Tigger1 DNA MER2_type 14 269 -2149 1746 166 4 4 chr17 24268728 24269060 -61169420 - AluJb SINE Alu 0 337 6 4713 171 42 12 chr17 24269060 24269636 -61168844 + Tigger1 DNA MER2_type 269 880 -1538 1087 90 0 0 chr17 24269637 24269771 -61168709 + AluSg SINE Alu 1 134 -176 2080 134 0 0 chr17 24269771 24270081 -61168399 + AluSx SINE Alu 1 310 0 7630 115 20 2 chr17 24270081 24271217 -61167263 + Tigger1 DNA MER2_type 870 2026 -392 404 310 70 0 chr17 24271217 24271359 -61167121 + MIR SINE MIR 110 261 -1 2195 110 3 3 chr17 24271486 24271787 -61166693 - AluSq SINE Alu -12 301 1 1976 139 3 10 chr17 24271992 24272295 -61166185 + AluSx SINE Alu 1 301 -11 1730 145 53 11 chr17 24272304 24272587 -61165893 + AluSx SINE Alu 1 295 -17 1953 152 11 20 chr17 24272588 24272937 -61165543 - L1MB4 LINE L1 -7 6173 5828 1930 115 56 0 chr17 24272939 24273208 -61165272 - AluSx SINE Alu -28 284 1 1133 272 146 15 chr17 24273453 24273511 -61164969 - L1ME3 LINE L1 -3 6159 6110 1701 180 7 3 chr17 24273511 24273806 -61164674 - AluJo SINE Alu -16 296 1 1133 272 146 15 chr17 24273806 24274269 -61164211 - L1ME3 LINE L1 -52 6110 5570 326 113 0 70 chr17 24274272 24274343 -61164137 - Alu SINE Alu 0 302 237 283 180 230 30 chr17 24274397 24274497 -61163983 - MLT1D LTR MaLR -49 456 337 316 273 57 57 chr17 24274824 24275000 -61163480 - MIR SINE MIR -77 185 10 1690 184 93 50 chr17 24275080 24275273 -61163207 - MLT1D LTR MaLR -49 456 273 1801 165 0 16 chr17 24275273 24275588 -61162892 + AluJb SINE Alu 3 312 0 1690 184 93 50 chr17 24275588 24275812 -61162668 - MLT1D LTR MaLR -232 273 21 361 262 13 54 chr17 24275929 24276078 -61162402 - L1MC4a LINE L1 -1954 5854 5712 1461 212 0 20 chr17 24276161 24276463 -61162017 + AluJo SINE Alu 1 296 -16 951 208 0 30 chr17 24276269 24276466 -61162014 + AluJb SINE Alu 109 299 -13 216 366 24 0 chr17 24276924 24277006 -61161474 - MIR SINE MIR -132 130 47 527 226 61 38 chr17 24277236 24277448 -61161032 - L1MC5 LINE L1 -44 7917 7701 1593 170 46 21 chr17 24277455 24277738 -61160742 - AluJb SINE Alu -22 290 1 748 230 47 72 chr17 24277780 24278015 -61160465 + MER102b DNA MER1_type 106 334 -7 480 244 25 75 chr17 24278262 24278422 -61160058 - MIR SINE MIR -79 183 32 1718 158 20 20 chr17 24280502 24280800 -61157680 - AluJo SINE Alu -14 298 1 544 274 37 37 chr17 24280803 24281048 -61157432 - Tigger8 DNA MER2_type -186 480 236 2213 97 56 0 chr17 24282004 24282345 -61156135 + L1PA11 LINE L1 5805 6164 -10 1592 109 0 0 chr17 24282351 24282553 -61155927 + AluSq SINE Alu 5 206 -107 333 102 0 0 chr17 24282553 24282602 -61155878 + AluSq SINE Alu 242 290 -11 21 0 0 0 chr17 24282612 24282633 -61155847 + AT_rich Low_complexity Low_complexity 1 21 0 530 264 54 18 chr17 24283290 24283457 -61155023 + MIR SINE MIR 20 192 -70 298 224 50 162 chr17 24283468 24283570 -61154910 + Charlie8 DNA MER1_type 1 113 -217 687 205 0 0 chr17 24283570 24283692 -61154788 + FLAM_A SINE Alu 1 122 -11 298 224 50 162 chr17 24283692 24283848 -61154632 + Charlie8 DNA MER1_type 113 230 -100 224 359 21 0 chr17 24284802 24284944 -61153536 + L2 LINE L2 2906 3050 -222 253 294 22 14 chr17 24285412 24285532 -61152948 + MIR SINE MIR 15 134 -74 338 277 21 0 chr17 24288971 24289065 -61149415 + MER5A DNA MER1_type 17 112 -77 544 258 7 26 chr17 24290732 24290887 -61147593 - MER103 DNA DNA -12 154 3 734 231 214 31 chr17 24290946 24291306 -61147174 + L2 LINE L2 2888 3313 0 262 310 194 19 chr17 24291319 24291535 -61146945 + MIR SINE MIR 8 261 -1 236 257 40 0 chr17 24292361 24292435 -61146045 - L2 LINE L2 -60 3212 3136 407 293 29 0 chr17 24293350 24293490 -61144990 - MIR SINE MIR -77 185 42 352 305 65 7 chr17 24294516 24294670 -61143810 - MIR3 SINE MIR -26 182 20 236 262 213 18 chr17 24295276 24295440 -61143040 + L2 LINE L2 3118 3313 0 361 277 294 6 chr17 24295565 24295742 -61142738 + MIR SINE MIR 6 233 -29 183 80 0 0 chr17 24296180 24296205 -61142275 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 225 250 83 24 chr17 24296215 24296299 -61142181 - L2 LINE L2 -35 3237 3149 358 290 191 16 chr17 24296375 24296558 -61141922 + MIR SINE MIR 22 236 -26 421 329 127 4 chr17 24297691 24297919 -61140561 + MIR SINE MIR 2 257 -5 2019 121 13 30 chr17 24298084 24298389 -61140091 - AluSx SINE Alu -12 300 1 1554 131 177 0 chr17 24299866 24300126 -61138354 + AluSx SINE Alu 1 306 -6 1714 162 14 17 chr17 24301155 24301452 -61137028 - AluJo SINE Alu -16 296 1 807 243 74 102 chr17 24303090 24303299 -61135181 - MER113 DNA MER1_type? -42 479 266 2199 116 3 22 chr17 24303299 24303618 -61134862 + AluSp SINE Alu 1 313 0 807 243 74 102 chr17 24303618 24303881 -61134599 - MER113 DNA MER1_type? -255 266 20 184 392 20 0 chr17 24304766 24304868 -61133612 + MIR SINE MIR 79 182 -80 382 241 0 18 chr17 24305239 24305351 -61133129 - MER103 DNA DNA -15 151 42 1963 144 10 10 chr17 24305854 24306153 -61132327 + AluJo SINE Alu 1 299 -13 235 254 51 0 chr17 24306653 24306712 -61131768 + MER94 DNA DNA 4 65 -69 392 345 113 13 chr17 24306845 24307074 -61131406 - MIR SINE MIR -3 259 8 195 303 15 0 chr17 24307151 24307217 -61131263 - L3b LINE CR1 -238 1345 1279 421 225 193 66 chr17 24308154 24308279 -61130201 + MIR SINE MIR 38 146 -116 1737 156 3 73 chr17 24308279 24308430 -61130050 + AluJb SINE Alu 1 120 -192 2215 96 0 23 chr17 24308430 24308733 -61129747 + AluSx SINE Alu 14 309 -3 1737 156 3 73 chr17 24308733 24308895 -61129585 + AluJb SINE Alu 120 292 -20 421 225 193 66 chr17 24308895 24308982 -61129498 + MIR SINE MIR 146 262 0 198 265 76 98 chr17 24308960 24309092 -61129388 - L2 LINE L2 -10 3303 3175 * 2299 115 3 0 chr17 24309496 24309801 -61128679 + AluSx SINE Alu 5 310 -2 495 281 36 7 chr17 24309848 24309987 -61128493 - MIR SINE MIR -6 256 114 295 244 22 33 chr17 24310288 24310378 -61128102 + L2 LINE L2 3184 3272 0 621 181 56 7 chr17 24310717 24310861 -61127619 - L2 LINE L2 0 3313 3163 391 151 0 19 chr17 24310998 24311078 -61127402 - AluS SINE Alu -246 62 4 738 223 51 0 chr17 24311225 24311400 -61127080 - MER5A DNA MER1_type -4 185 2 337 335 132 7 chr17 24311523 24311675 -61126805 - MIR SINE MIR -71 191 21 353 288 88 65 chr17 24311834 24312004 -61126476 + MIR SINE MIR 86 259 -3 248 303 114 15 chr17 24312210 24312286 -61126194 - L2 LINE L2 -2 3270 3203 4878 116 35 13 chr17 24312286 24313052 -61125428 - LTR39 LTR ERV1 0 783 1 248 303 114 15 chr17 24313052 24313107 -61125373 - L2 LINE L2 -69 3203 3126 342 283 22 74 chr17 24313110 24313379 -61125101 - LTR39-int LTR ERV1 -58 8062 7808 318 348 37 29 chr17 24313450 24313694 -61124786 - LTR49-int LTR ERV1 -535 4419 4174 5681 82 37 17 chr17 24313821 24314305 -61124175 + LTR12 LTR ERV1 1 509 -317 2448 70 6 10 chr17 24314305 24314617 -61123863 + AluY SINE Alu 1 311 0 5681 82 37 17 chr17 24314617 24314942 -61123538 + LTR12 LTR ERV1 509 826 0 9066 177 65 73 chr17 24315828 24316351 -61122129 - LTR49-int LTR ERV1 -612 5571 5045 2407 71 0 13 chr17 24316351 24316662 -61121818 - AluY SINE Alu -4 307 1 9066 177 65 73 chr17 24316662 24318354 -61120126 - LTR49-int LTR ERV1 -1138 5045 3341 2064 143 0 7 chr17 24318354 24318654 -61119826 + AluJo SINE Alu 1 298 -14 9066 177 65 73 chr17 24318654 24319905 -61118575 - LTR49-int LTR ERV1 -2842 3341 2024 387 0 0 0 chr17 24319905 24319948 -61118532 + (CA)n Simple_repeat Simple_repeat 2 44 0 9066 177 65 73 chr17 24319948 24320136 -61118344 - LTR49-int LTR ERV1 -4159 2024 1836 464 63 16 0 chr17 24320136 24320199 -61118281 + MER57B LTR ERV1 1 64 -370 * 1299 101 53 0 chr17 24320197 24320386 -61118094 - MER57B LTR ERV1 -167 267 69 378 302 69 51 chr17 24322847 24323355 -61115125 + MER65B LTR ERV1 1 445 0 317 347 56 20 chr17 24323363 24323559 -61114921 + MER65B-int LTR ERV1 12 214 -4657 377 161 0 103 chr17 24323900 24323987 -61114493 + LTR57-int LTR ERVL 323 400 -4943 344 229 0 86 chr17 24323907 24324012 -61114468 + MER65B-int LTR ERV1 816 911 -875 * 783 151 5 87 chr17 24324017 24324202 -61114278 + LTR49-int LTR ERV1 618 787 -6750 380 120 80 0 chr17 24324265 24324340 -61114140 + LTR39 LTR ERV1 19 99 -684 6040 109 48 62 chr17 24324560 24324590 -61113890 - Tigger3b DNA MER2_type -1797 1231 1202 2427 121 6 3 chr17 24324590 24324953 -61113527 - THE1B LTR MaLR 0 364 1 6040 109 48 62 chr17 24324953 24326064 -61112416 - Tigger3b DNA MER2_type -1826 1202 106 4154 135 59 39 chr17 24326380 24327148 -61111332 + LTR39 LTR ERV1 1 783 0 1200 214 88 9 chr17 24327807 24328124 -61110356 + LTR49-int LTR ERV1 939 1280 -5051 2275 136 140 5 chr17 24328124 24328530 -61109950 + LTR8A LTR ERV1 1 461 -266 843 182 12 18 chr17 24328538 24328703 -61109777 + LTR8A LTR ERV1 564 727 0 335 251 1 0 chr17 24328703 24328794 -61109686 + LTR49-int LTR ERV1 746 1917 -2963 451 168 32 11 chr17 24328910 24329005 -61109475 + LTR49-int LTR ERV1 1372 1468 -4863 1200 105 0 0 chr17 24329005 24329177 -61109303 - MER57B LTR ERV1 0 434 263 233 346 9 0 chr17 24329202 24329309 -61109171 - MER65B LTR ERV1 -162 369 262 336 254 66 16 chr17 24329435 24329557 -61108923 - MER65B LTR ERV1 -403 128 1 217 198 30 119 chr17 24330033 24330134 -61108346 - L2 LINE L2 -179 3134 3043 281 81 48 65 chr17 24330134 24330196 -61108284 - Alu SINE Alu -7 293 233 756 237 8 71 chr17 24330222 24330475 -61108005 - L2 LINE L2 -1537 1777 1541 180 256 0 0 chr17 24330469 24330512 -61107968 + L3 LINE CR1 1408 1450 -127 * 1796 154 29 20 chr17 24331030 24331221 -61107259 - AluJo SINE Alu -2 310 113 369 0 0 0 chr17 24331221 24331262 -61107218 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1796 154 29 20 chr17 24331262 24331376 -61107104 - AluJo SINE Alu -199 113 2 209 191 0 0 chr17 24331532 24331574 -61106906 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 464 313 110 0 chr17 24331628 24331791 -61106689 + MIR SINE MIR 2 182 -80 992 292 102 33 chr17 24331814 24332235 -61106245 - L2 LINE L2 0 3313 2864 525 200 48 24 chr17 24335201 24335326 -61103154 + MER45A DNA AcHobo 51 178 0 373 361 89 9 chr17 24335536 24335749 -61102731 - MIR SINE MIR -16 246 17 252 0 0 0 chr17 24336066 24336094 -61102386 + (CA)n Simple_repeat Simple_repeat 2 29 0 687 254 17 6 chr17 24337010 24337183 -61101297 + MIR SINE MIR 5 179 -83 593 269 23 29 chr17 24337355 24337526 -61100954 - MER5B DNA MER1_type -8 170 1 195 152 0 0 chr17 24337561 24337594 -61100886 + MIR3 SINE MIR 170 202 -6 2092 140 3 3 chr17 24337608 24337916 -61100564 + AluJo SINE Alu 1 308 -4 2200 114 6 16 chr17 24338073 24338389 -61100091 + AluSq SINE Alu 1 313 0 856 231 18 74 chr17 24338528 24338757 -61099723 - MIR SINE MIR -3 259 44 299 291 209 0 chr17 24339043 24339177 -61099303 + MIR3 SINE MIR 38 199 -9 285 190 215 13 chr17 24339214 24339293 -61099187 - MIR SINE MIR -34 228 134 294 51 0 0 chr17 24339293 24339332 -61099148 - MADE1 DNA Mariner 0 80 42 303 93 0 0 chr17 24340119 24340162 -61098318 + (CA)n Simple_repeat Simple_repeat 1 43 0 597 306 102 0 chr17 24340285 24340491 -61097989 - L3 LINE CR1 -2 1575 1349 300 265 31 20 chr17 24341663 24341761 -61096719 - MIR3 SINE MIR -22 186 88 189 107 0 0 chr17 24342012 24342040 -61096440 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 2054 142 0 0 chr17 24342044 24342332 -61096148 - AluJb SINE Alu -24 288 1 572 183 61 61 chr17 24342401 24342581 -61095899 - L1MC5 LINE L1 -30 7931 7752 22 88 0 0 chr17 24342645 24342702 -61095778 + AT_rich Low_complexity Low_complexity 1 57 0 2894 146 6 10 chr17 24343191 24343678 -61094802 + MER31A LTR ERV1 1 485 0 306 0 0 0 chr17 24343711 24343745 -61094735 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 373 296 136 15 chr17 24344180 24344379 -61094101 + L1ME4a LINE L1 5895 6117 -4 1728 126 24 38 chr17 24344635 24344928 -61093552 + AluJb SINE Alu 1 289 -23 23 0 0 0 chr17 24345709 24345732 -61092748 + GC_rich Low_complexity Low_complexity 1 23 0 305 264 14 0 chr17 24346047 24346119 -61092361 - MIR SINE MIR -110 152 80 378 107 0 0 chr17 24346628 24346684 -61091796 + (CA)n Simple_repeat Simple_repeat 2 57 0 185 295 369 0 chr17 24347198 24347320 -61091160 + MIR SINE MIR 1 167 -95 672 269 25 0 chr17 24347540 24347700 -61090780 + MIR SINE MIR 39 202 -60 271 240 13 13 chr17 24348003 24348078 -61090402 + FLAM_A SINE Alu 58 132 -1 180 111 0 0 chr17 24348081 24348108 -61090372 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 1992 138 10 16 chr17 24348112 24348417 -61090063 + AluSx SINE Alu 6 308 -4 247 296 28 74 chr17 24348952 24349168 -61089312 + L2 LINE L2 2840 3045 -227 724 275 92 0 chr17 24349250 24349468 -61089012 - MIR SINE MIR -12 250 13 279 331 47 60 chr17 24349731 24349990 -61088490 + MIR SINE MIR 1 255 -7 405 308 101 0 chr17 24350004 24350173 -61088307 - MIR SINE MIR -17 245 60 1409 147 9 18 chr17 24351497 24351721 -61086759 + AluJo SINE Alu 1 222 -90 291 184 35 11 chr17 24351729 24351816 -61086664 + GA-rich Low_complexity Low_complexity 3 91 0 384 235 96 37 chr17 24351834 24351970 -61086510 + MIR SINE MIR 47 190 -72 180 0 0 0 chr17 24352539 24352559 -61085921 + (T)n Simple_repeat Simple_repeat 1 20 0 1884 161 0 7 chr17 24353187 24353501 -61084979 - AluSx SINE Alu 0 312 1 278 237 26 0 chr17 24353879 24353955 -61084525 - MER34B LTR ERV1 -159 406 329 236 153 17 68 chr17 24354253 24354312 -61084168 - MIR SINE MIR -59 203 148 673 252 38 4 chr17 24354529 24354755 -61083725 - MER34B LTR ERV1 -4 561 325 1628 148 69 31 chr17 24354755 24355046 -61083434 + AluJo SINE Alu 1 302 -10 673 252 38 4 chr17 24355046 24355057 -61083423 - MER34B LTR ERV1 -240 325 316 618 14 0 0 chr17 24355057 24355128 -61083352 + (GGAAA)n Simple_repeat Simple_repeat 1 71 0 539 259 112 79 chr17 24355147 24355479 -61083001 - MER34 LTR ERV1 -222 343 1 325 311 48 0 chr17 24355490 24355593 -61082887 + MIR SINE MIR 47 154 -108 432 193 18 0 chr17 24355845 24355959 -61082521 - L1MB4 LINE L1 0 6180 6065 629 244 101 0 chr17 24356577 24356773 -61081707 - MIR SINE MIR -21 241 18 762 203 46 46 chr17 24356793 24357028 -61081452 - MIR SINE MIR -35 227 2 377 229 38 8 chr17 24357213 24357344 -61081136 - MER113 DNA MER1_type? -366 155 21 185 317 29 19 chr17 24357382 24357486 -61080994 + MIR3 SINE MIR 83 187 -21 821 271 93 16 chr17 24357937 24358258 -61080222 - LTR16C LTR ERVL -40 451 106 1922 153 0 33 chr17 24358814 24359114 -61079366 + AluJb SINE Alu 1 290 -22 816 172 43 37 chr17 24359122 24359285 -61079195 + FRAM SINE Alu 1 161 -15 329 272 224 0 chr17 24359359 24359484 -61078996 + L1ME4a LINE L1 5966 6118 -3 339 273 84 35 chr17 24360030 24360173 -61078307 + MIR SINE MIR 37 186 -76 590 267 67 6 chr17 24360365 24360530 -61077950 - MIR SINE MIR -56 206 32 431 254 82 100 chr17 24360982 24361313 -61077167 + L2 LINE L2 2932 3256 -16 3543 171 35 22 chr17 24361313 24362030 -61076450 - L1MB7 LINE L1 -14 6170 5445 387 0 0 0 chr17 24362065 24362108 -61076372 + (TGGA)n Simple_repeat Simple_repeat 2 44 0 229 339 0 43 chr17 24362849 24362964 -61075516 + MER117 DNA MER1_type 8 117 -80 270 292 22 22 chr17 24363275 24363364 -61075116 + MIR SINE MIR 90 178 -84 1955 153 7 3 chr17 24364638 24364939 -61073541 - AluJo SINE Alu -10 302 1 719 219 45 76 chr17 24364939 24365031 -61073449 - L1MB7 LINE L1 -749 5397 5304 2060 127 38 0 chr17 24365031 24365322 -61073158 - AluSx SINE Alu -10 302 1 719 219 45 76 chr17 24365322 24365517 -61072963 - L1MB7 LINE L1 -842 5304 5119 249 343 56 0 chr17 24365536 24365644 -61072836 - L2 LINE L2 -262 3010 2897 2518 112 38 67 chr17 24365653 24365877 -61072603 - Tigger2a DNA MER2_type -2274 434 228 1766 158 13 47 chr17 24365877 24366175 -61072305 + AluJo SINE Alu 1 288 -24 2518 112 38 67 chr17 24366175 24366397 -61072083 - Tigger2a DNA MER2_type -2480 228 1 2216 136 32 25 chr17 24366480 24366885 -61071595 - MSTB LTR MaLR 0 426 19 357 307 82 60 chr17 24367080 24367104 -61071376 - L1ME4a LINE L1 -5 6116 6094 1851 150 3 33 chr17 24367104 24367410 -61071070 + AluJb SINE Alu 1 297 -15 357 307 82 60 chr17 24367410 24367526 -61070954 - L1ME4a LINE L1 -27 6094 5982 192 40 0 0 chr17 24367526 24367551 -61070929 + (CA)n Simple_repeat Simple_repeat 1 25 0 357 307 82 60 chr17 24367551 24367725 -61070755 - L1ME4a LINE L1 -139 5982 5794 664 275 69 0 chr17 24367829 24368018 -61070462 - MIR SINE MIR -8 254 53 389 306 89 38 chr17 24367950 24368241 -61070239 - L2 LINE L2 -706 2608 2303 * 2349 117 95 35 chr17 24368300 24368657 -61069823 + MSTA LTR MaLR 1 386 -42 2117 138 10 0 chr17 24368657 24368961 -61069519 - AluSx SINE Alu -5 307 1 2349 117 95 35 chr17 24368961 24369004 -61069476 + MSTA LTR MaLR 386 425 -3 220 274 0 0 chr17 24369677 24369728 -61068752 + L2 LINE L2 3261 3311 -2 961 277 93 27 chr17 24369794 24370159 -61068321 + L2 LINE L2 2925 3313 0 1465 240 70 28 chr17 24371170 24371478 -61067002 + L1ME3 LINE L1 4884 5178 -984 1772 161 3 46 chr17 24371478 24371802 -61066678 + AluJo SINE Alu 1 310 -2 1465 240 70 28 chr17 24371802 24372168 -61066312 + L1ME3 LINE L1 5178 5596 -566 327 171 154 57 chr17 24372180 24372303 -61066177 + L1ME3 LINE L1 5657 5791 -379 563 248 15 0 chr17 24372425 24372558 -61065922 + MER58B DNA MER1_type 207 341 0 306 235 12 12 chr17 24372563 24372644 -61065836 + L1ME3 LINE L1 5807 5887 -283 1021 170 0 6 chr17 24372644 24372809 -61065671 + AluSg/x SINE Alu 131 294 -18 826 227 104 20 chr17 24372809 24373060 -61065420 + L1ME3 LINE L1 5885 6156 -6 586 301 11 16 chr17 24373315 24373501 -61064979 - MER5A DNA MER1_type -3 186 2 6757 125 18 20 chr17 24373739 24374813 -61063667 - MER11C LTR ERVK 0 1071 1 2249 105 6 19 chr17 24375014 24375327 -61063153 - AluSg SINE Alu 0 310 2 241 266 0 0 chr17 24375540 24375604 -61062876 + L1MC/D LINE L1 5827 5890 -1918 1542 181 0 65 chr17 24375766 24376076 -61062404 - AluJo SINE Alu -22 290 1 191 200 0 20 chr17 24376151 24376201 -61062279 + GA-rich Low_complexity Low_complexity 4 52 0 499 299 183 0 chr17 24376642 24376839 -61061641 + MIR SINE MIR 24 256 -6 396 229 122 0 chr17 24377068 24377199 -61061281 + MER103 DNA DNA 14 160 -6 268 336 154 7 chr17 24377418 24377567 -61060913 + MIR SINE MIR 20 190 -72 298 202 46 101 chr17 24377622 24377731 -61060749 - MLT1K LTR MaLR 0 588 486 231 274 122 92 chr17 24377783 24377947 -61060533 + L3 LINE CR1 224 392 -1185 1758 169 43 10 chr17 24378348 24378649 -61059831 - AluJb SINE Alu -1 311 1 802 238 72 78 chr17 24378649 24378956 -61059524 - L1ME3 LINE L1 -55 6107 5803 292 300 11 0 chr17 24379016 24379106 -61059374 + L1M4 LINE L1 4007 4097 -2049 1629 166 7 43 chr17 24379120 24379422 -61059058 + AluJo SINE Alu 11 301 -11 422 234 86 16 chr17 24379456 24379584 -61058896 + MIR3 SINE MIR 42 178 -30 681 115 88 0 chr17 24379629 24379742 -61058738 + L1MB4 LINE L1 5836 5958 -222 2210 206 226 13 chr17 24379758 24380829 -61057651 + L1 LINE L1 3254 4722 -1424 731 234 5 16 chr17 24380845 24381029 -61057451 + MIR SINE MIR 81 262 0 360 254 66 16 chr17 24383488 24383610 -61054870 + MER65B LTR ERV1 1 128 -403 231 293 47 28 chr17 24383736 24383842 -61054638 + MER65B LTR ERV1 262 369 -162 * 311 231 55 93 chr17 24383809 24383991 -61054489 + MER65A LTR ERV1 267 441 -4 297 339 57 21 chr17 24384003 24384195 -61054285 + MER65A-int LTR ERV1 12 210 -4661 396 161 0 103 chr17 24384540 24384627 -61053853 + LTR57-int LTR ERVL 323 400 -4943 804 151 5 87 chr17 24384657 24384842 -61053638 + MER65A-int LTR ERV1 618 787 -6750 397 120 80 0 chr17 24384905 24384980 -61053500 + LTR39 LTR ERV1 19 99 -684 6464 102 52 67 chr17 24385200 24385230 -61053250 - Tigger3b DNA MER2_type -1797 1231 1202 2544 121 6 3 chr17 24385230 24385593 -61052887 - THE1B LTR MaLR 0 364 1 6464 102 52 67 chr17 24385593 24386704 -61051776 - Tigger3b DNA MER2_type -1826 1202 106 4367 134 59 39 chr17 24387020 24387788 -61050692 + LTR39 LTR ERV1 1 783 0 1296 214 88 9 chr17 24388447 24388764 -61049716 + MER65A-int LTR ERV1 939 1280 -5051 2366 136 140 5 chr17 24388764 24389170 -61049310 + LTR8A LTR ERV1 1 461 -266 890 182 12 18 chr17 24389178 24389343 -61049137 + LTR8A LTR ERV1 564 727 0 372 153 178 59 chr17 24389343 24389461 -61049019 + MER65A-int LTR ERV1 1277 1917 -2963 481 168 32 11 chr17 24389550 24389645 -61048835 + LOR1-int LTR ERV1 1372 1468 -4863 1260 105 0 0 chr17 24389645 24389817 -61048663 - MER57B LTR ERV1 0 434 263 373 270 101 62 chr17 24389842 24390197 -61048283 - MER65B LTR ERV1 -162 369 1 1373 101 53 0 chr17 24392657 24392846 -61045634 + MER57B LTR ERV1 69 267 -167 489 63 16 0 chr17 24392844 24392907 -61045573 - MER57B LTR ERV1 -370 64 1 * 1324 244 29 92 chr17 24392907 24393095 -61045385 + LOR1-int LTR ERV1 1836 2034 -3912 423 0 0 0 chr17 24393095 24393142 -61045338 + (TG)n Simple_repeat Simple_repeat 2 48 0 1324 244 29 92 chr17 24393142 24393531 -61044949 + LOR1-int LTR ERV1 2034 2377 -3569 * 2582 212 34 58 chr17 24393500 24394203 -61044277 + LOR1-int LTR ERV1 2627 3312 -3019 9720 153 58 57 chr17 24394219 24394393 -61044087 + LOR1-int LTR ERV1 2025 2197 -3986 2024 143 0 7 chr17 24394393 24394693 -61043787 - AluJo SINE Alu -14 298 1 9720 153 58 57 chr17 24394693 24396380 -61042100 + LOR1-int LTR ERV1 2197 3881 -2302 2378 71 0 13 chr17 24396380 24396691 -61041789 + AluY SINE Alu 1 307 -4 9720 153 58 57 chr17 24396691 24397214 -61041266 + LOR1-int LTR ERV1 3881 5571 -612 5940 83 37 17 chr17 24398100 24398425 -61040055 - LTR12 LTR ERV1 0 826 509 2359 77 6 10 chr17 24398425 24398737 -61039743 - AluY SINE Alu 0 311 1 5940 83 37 17 chr17 24398737 24399221 -61039259 - LTR12 LTR ERV1 -317 509 1 313 328 41 33 chr17 24399348 24399592 -61038888 + LOR1-int LTR ERV1 4174 4419 -535 362 279 22 74 chr17 24399663 24399932 -61038548 + LOR1-int LTR ERV1 7808 8062 -58 214 303 114 15 chr17 24399935 24399990 -61038490 + L2 LINE L2 3126 3174 -98 5135 116 35 13 chr17 24399990 24400756 -61037724 + LTR39 LTR ERV1 1 783 0 214 303 114 15 chr17 24400756 24400832 -61037648 + L2 LINE L2 3174 3270 -2 308 288 88 65 chr17 24401038 24401208 -61037272 - MIR SINE MIR -3 259 86 343 373 8 8 chr17 24401367 24401485 -61036995 + MIR SINE MIR 21 138 -124 758 223 51 0 chr17 24401642 24401817 -61036663 + MER5A DNA MER1_type 2 185 -4 1997 145 3 7 chr17 24401991 24402295 -61036185 + AluJb SINE Alu 10 312 0 21 36 0 0 chr17 24402486 24402514 -61035966 + AT_rich Low_complexity Low_complexity 1 28 0 1802 125 0 0 chr17 24402853 24403093 -61035387 - AluSg SINE Alu -14 296 57 511 250 39 32 chr17 24403097 24403253 -61035227 + MER63A DNA MER1_type 54 210 0 473 224 45 37 chr17 24403409 24403543 -61034937 - MER5B DNA MER1_type -30 148 14 1102 138 48 0 chr17 24403656 24403845 -61034635 - L1MA9 LINE L1 -1 6311 6114 265 306 72 0 chr17 24404839 24404950 -61033530 - MIR SINE MIR -46 216 98 2743 210 22 82 chr17 24404976 24405661 -61032819 - L1ME1 LINE L1 -195 5971 5339 1473 175 20 10 chr17 24405661 24405953 -61032527 - L1MB3 LINE L1 -2 6181 5887 2743 210 22 82 chr17 24405953 24406075 -61032405 - L1ME1 LINE L1 -827 5339 5211 1117 110 0 0 chr17 24406085 24406240 -61032240 - AluSg/x SINE Alu -6 306 152 1245 241 37 49 chr17 24406240 24406671 -61031809 + L2 LINE L2 2868 3293 -20 613 305 13 89 chr17 24406697 24406877 -61031603 - L2 LINE L2 -14 3258 3123 1342 196 77 25 chr17 24406877 24407204 -61031276 - MER2 DNA MER2_type 0 344 1 613 305 13 89 chr17 24407204 24407416 -61031064 - L2 LINE L2 -149 3123 2896 1816 168 0 7 chr17 24407640 24407926 -61030554 + AluJb SINE Alu 1 284 -28 222 105 0 0 chr17 24407926 24407964 -61030516 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 1150 277 37 21 chr17 24407980 24408355 -61030125 + L1MC4a LINE L1 5517 5897 -1911 435 266 0 59 chr17 24409424 24409593 -61028887 - MIR SINE MIR -84 178 20 256 316 31 10 chr17 24409996 24410094 -61028386 + L3b LINE CR1 1294 1393 -190 2277 113 36 36 chr17 24410157 24410521 -61027959 + THE1B LTR MaLR 1 364 0 317 333 141 0 chr17 24411359 24411494 -61026986 - MIR SINE MIR -60 202 49 296 256 0 0 chr17 24412079 24412157 -61026323 + MIR SINE MIR 185 262 0 428 323 41 95 chr17 24412250 24412712 -61025768 + L2 LINE L2 2828 3264 -8 2057 136 3 3 chr17 24413643 24413944 -61024536 + AluSx SINE Alu 1 301 -11 353 331 54 0 chr17 24414222 24414406 -61024074 + MIR SINE MIR 34 227 -35 238 269 59 76 chr17 24414537 24414775 -61023705 - L2 LINE L2 -219 3053 2820 362 328 100 30 chr17 24415554 24415571 -61022909 - L1ME4a LINE L1 -30 6091 6077 1975 169 0 3 chr17 24415571 24415884 -61022596 + AluJo SINE Alu 1 312 0 362 328 100 30 chr17 24415884 24416165 -61022315 - L1ME4a LINE L1 -44 6077 5772 376 288 50 31 chr17 24416250 24416410 -61022070 + MIR SINE MIR 53 215 -47 904 166 20 0 chr17 24416496 24416647 -61021833 - MER2 DNA MER2_type 0 345 192 2263 162 22 36 chr17 24416650 24416872 -61021608 - Tigger2a DNA MER2_type -2274 434 219 885 26 188 0 chr17 24416872 24416989 -61021491 + MER85 DNA T2_type 1 139 0 2263 162 22 36 chr17 24416989 24417179 -61021301 - Tigger2a DNA MER2_type -2489 219 28 991 172 6 0 chr17 24417191 24417365 -61021115 - MER2 DNA MER2_type -155 190 16 332 247 151 64 chr17 24417475 24417694 -61020786 + MIR SINE MIR 12 249 -13 2147 105 6 35 chr17 24417895 24418208 -61020272 + AluSq SINE Alu 1 304 -9 233 201 28 35 chr17 24418416 24418561 -61019919 + CT-rich Low_complexity Low_complexity 1 144 0 338 264 120 24 chr17 24418673 24418798 -61019682 - LTR33A LTR ERVL -2 521 385 526 258 217 10 chr17 24419186 24419384 -61019096 + MIR SINE MIR 6 244 -18 1054 229 95 20 chr17 24419673 24420024 -61018456 - L1MD2 LINE L1 -17 6149 5791 1604 162 25 11 chr17 24420146 24420424 -61018056 + AluJo SINE Alu 1 282 -30 536 157 20 177 chr17 24420980 24421127 -61017353 + FLAM_C SINE Alu 2 125 -18 571 242 30 4 chr17 24421352 24421495 -61016985 + MLT1H1 LTR MaLR 16 171 -378 2153 185 61 18 chr17 24421523 24422024 -61016456 + LTR27 LTR ERV1 3 501 0 865 219 62 33 chr17 24422061 24422376 -61016104 + MLT1H1 LTR MaLR 205 554 -1 4208 147 71 20 chr17 24422729 24423473 -61015007 + LTR39 LTR ERV1 2 783 0 260 304 11 0 chr17 24423508 24423600 -61014880 - MIR SINE MIR -14 248 156 186 221 195 0 chr17 24424049 24424126 -61014354 + MIR SINE MIR 84 175 -87 1789 164 11 0 chr17 24424238 24424525 -61013955 + AluJb SINE Alu 1 290 -22 4563 157 23 24 chr17 24424676 24425538 -61012942 - L1MB7 LINE L1 -16 6168 5308 423 38 0 0 chr17 24426055 24426108 -61012372 + (TG)n Simple_repeat Simple_repeat 1 53 0 210 147 0 0 chr17 24426340 24426374 -61012106 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 191 152 87 0 chr17 24426475 24426521 -61011959 + L2 LINE L2 3134 3183 -89 455 175 61 26 chr17 24426525 24426639 -61011841 - L2 LINE L2 -4 3268 3151 2298 52 24 21 chr17 24426730 24427020 -61011460 - AluY SINE Alu -20 291 1 207 257 151 22 chr17 24427882 24428061 -61010419 + L2 LINE L2 2776 2977 -337 2418 103 0 0 chr17 24428838 24429150 -61009330 + AluSx SINE Alu 1 312 0 378 235 39 20 chr17 24429272 24429374 -61009106 - MIR SINE MIR -131 131 28 195 234 0 64 chr17 24430969 24431016 -61007464 - MIR SINE MIR -198 64 21 210 254 0 0 chr17 24431103 24431162 -61007318 + A-rich Low_complexity Low_complexity 1 59 0 209 257 177 35 chr17 24432346 24432459 -61006021 - MIR SINE MIR -20 242 114 2261 88 7 0 chr17 24432879 24433186 -61005294 + AluSp SINE Alu 3 311 -2 1460 176 49 189 chr17 24433398 24433734 -61004746 - L1MD3 LINE L1 0 8042 7661 790 126 9 0 chr17 24433734 24433845 -61004635 - AluJ SINE Alu -18 294 183 750 175 33 0 chr17 24433853 24433973 -61004507 - AluJ SINE Alu -176 126 3 1460 176 49 189 chr17 24433973 24434235 -61004245 - L1MD3 LINE L1 -388 7654 7438 412 248 183 26 chr17 24435059 24435212 -61003268 + MER5A DNA MER1_type 10 186 -3 1671 148 78 0 chr17 24435310 24435594 -61002886 + AluSx SINE Alu 1 306 -6 565 198 19 0 chr17 24435643 24435749 -61002731 - MIR SINE MIR -126 136 29 315 0 0 0 chr17 24435756 24435791 -61002689 + (A)n Simple_repeat Simple_repeat 1 35 0 737 263 106 28 chr17 24435796 24436051 -61002429 - L1ME1 LINE L1 -7 6159 5885 325 268 99 0 chr17 24436347 24436489 -61001991 + L2 LINE L2 2899 3054 -218 186 269 115 0 chr17 24436679 24436731 -61001749 - MIR SINE MIR -60 148 91 605 294 167 46 chr17 24436967 24437349 -61001131 + MLT1K LTR MaLR 2 465 -123 1744 146 36 7 chr17 24437349 24437651 -61000829 + AluJo SINE Alu 1 311 -1 605 294 167 46 chr17 24437651 24437789 -61000691 + MLT1K LTR MaLR 465 585 -3 293 281 67 94 chr17 24438389 24438557 -60999923 + L2 LINE L2 2348 2519 -795 2401 78 13 0 chr17 24438557 24438866 -60999614 - AluSp SINE Alu 0 313 1 293 281 67 94 chr17 24438866 24439103 -60999377 + L2 LINE L2 2519 2742 -572 210 304 20 10 chr17 24439383 24439485 -60998995 + L2 LINE L2 2765 2867 -447 1458 172 59 92 chr17 24439583 24439634 -60998846 - MLT2D LTR ERVL 0 414 363 414 0 0 0 chr17 24439634 24439680 -60998800 + (TG)n Simple_repeat Simple_repeat 2 47 0 1458 172 59 92 chr17 24439680 24440053 -60998427 - MLT2D LTR ERVL -51 363 4 441 295 13 6 chr17 24440426 24440582 -60997898 + L1MC4 LINE L1 7793 7949 -93 407 304 129 51 chr17 24440660 24441193 -60997287 - L3 LINE CR1 -63 1514 940 2094 108 16 0 chr17 24441217 24441523 -60996957 - AluSq SINE Alu -2 311 1 888 244 53 5 chr17 24441872 24442081 -60996399 - MIR SINE MIR -31 231 13 372 297 306 0 chr17 24442072 24442301 -60996179 - L3 LINE CR1 -874 703 405 * 730 256 47 51 chr17 24443192 24443426 -60995054 + MIR SINE MIR 28 260 -2 774 303 18 5 chr17 24443622 24443843 -60994637 + MIR SINE MIR 21 244 -18 1713 183 10 3 chr17 24443848 24444149 -60994331 - AluJb SINE Alu -8 304 2 1645 163 31 25 chr17 24444421 24444747 -60993733 + L1MB8 LINE L1 5850 6177 -1 23 33 0 0 chr17 24445178 24445208 -60993272 + GC_rich Low_complexity Low_complexity 1 30 0 204 125 0 0 chr17 24446124 24446156 -60992324 + (T)n Simple_repeat Simple_repeat 1 32 0 252 242 32 21 chr17 24448530 24448625 -60989855 + GA-rich Low_complexity Low_complexity 3 98 0 194 263 18 18 chr17 24448792 24448849 -60989631 - L2 LINE L2 -9 3263 3207 * 255 307 195 12 chr17 24448843 24449084 -60989396 + L2 LINE L2 2606 2890 -424 1084 239 91 69 chr17 24449269 24449374 -60989106 - LTR16C LTR ERVL -6 485 384 1902 138 22 16 chr17 24449374 24449685 -60988795 + AluSq SINE Alu 1 313 0 1084 239 91 69 chr17 24449685 24450007 -60988473 - LTR16C LTR ERVL -107 384 12 241 258 0 15 chr17 24450017 24450083 -60988397 + (CATATA)n Simple_repeat Simple_repeat 5 69 0 646 255 121 15 chr17 24450171 24450493 -60987987 + L2 LINE L2 1012 1424 -1890 1648 110 4 0 chr17 24450569 24450806 -60987674 + AluSp SINE Alu 1 238 -75 696 92 0 0 chr17 24450811 24450909 -60987571 + AluSp/q SINE Alu 212 309 -4 264 333 31 0 chr17 24450913 24451042 -60987438 + L2 LINE L2 1545 1677 -1637 454 239 167 0 chr17 24451053 24451209 -60987271 + MER5A DNA MER1_type 4 189 0 398 321 194 17 chr17 24451340 24451633 -60986847 - L2 LINE L2 0 3313 2969 366 282 39 32 chr17 24451613 24451769 -60986711 + L2 LINE L2 1785 1941 -1373 * 1611 182 0 16 chr17 24451854 24452161 -60986319 + AluJb SINE Alu 1 302 -10 2239 110 0 0 chr17 24452163 24452471 -60986009 + AluSg SINE Alu 1 308 -2 7880 19 0 0 chr17 24452592 24453722 -60984758 - L1PA2 LINE L1 -6 6149 5020 4054 26 0 0 chr17 24453722 24454190 -60984290 + L1PA2 LINE L1 4535 5002 -1144 349 276 0 11 chr17 24454541 24454628 -60983852 - Tigger8 DNA MER2_type -550 116 31 1808 140 40 0 chr17 24454686 24455014 -60983466 - AluSx SINE Alu 0 340 1 1008 191 46 66 chr17 24455306 24455500 -60982980 + MER58B DNA MER1_type 106 296 -2124 2018 127 7 0 chr17 24455500 24455807 -60982673 + AluSx SINE Alu 1 309 -3 1008 191 46 66 chr17 24455807 24455853 -60982627 + MER58B DNA MER1_type 296 341 0 183 327 168 18 chr17 24459662 24459775 -60978705 - L2 LINE L2 -4 3268 3139 316 235 52 66 chr17 24459920 24460003 -60978477 - MIR SINE MIR -7 255 173 4174 107 28 28 chr17 24460003 24460445 -60978035 + MER41B LTR ERV1 1 445 -190 2009 129 3 0 chr17 24460445 24460739 -60977741 + AluSx SINE Alu 9 303 -9 4174 107 28 28 chr17 24460739 24460931 -60977549 + MER41B LTR ERV1 444 635 0 316 235 52 66 chr17 24460931 24460983 -60977497 - MIR SINE MIR -89 173 122 2025 99 0 3 chr17 24460984 24461293 -60977187 + AluSc SINE Alu 1 308 0 737 258 85 88 chr17 24461377 24461557 -60976923 + MLT1J LTR MaLR 25 204 -307 1455 175 40 15 chr17 24461557 24461831 -60976649 + AluJb SINE Alu 1 281 -31 237 98 0 0 chr17 24461836 24461877 -60976603 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 737 258 85 88 chr17 24461877 24462135 -60976345 + MLT1J LTR MaLR 208 468 -43 390 229 108 0 chr17 24462248 24462331 -60976149 - L2 LINE L2 -19 3294 3203 2010 68 64 0 chr17 24462790 24463077 -60975403 - AluSc SINE Alu 0 304 1 503 280 106 26 chr17 24463194 24463383 -60975097 + MIR SINE MIR 30 233 -29 2261 86 0 3 chr17 24463387 24463690 -60974790 - AluSq SINE Alu -11 302 1 4905 18 7 0 chr17 24464065 24464621 -60973859 - L1PA3 LINE L1 0 6155 5596 507 17 0 0 chr17 24464700 24464760 -60973720 + (CA)n Simple_repeat Simple_repeat 1 60 0 313 273 153 7 chr17 24464787 24464937 -60973543 + L2 LINE L2 2435 2606 -708 425 221 214 7 chr17 24464951 24465096 -60973384 + MER5A DNA MER1_type 9 183 -6 1507 124 4 4 chr17 24465204 24465430 -60973050 - AluSx SINE Alu -86 226 1 418 293 94 50 chr17 24465441 24465738 -60972742 - L1MEd LINE L1 -5567 552 243 2120 81 3 3 chr17 24465917 24466228 -60972252 - AluSp SINE Alu 0 311 1 288 368 14 7 chr17 24466333 24466477 -60972003 + L2 LINE L2 2683 2827 -487 615 175 23 128 chr17 24466567 24466635 -60971845 + Charlie5 DNA MER1_type 2356 2430 -155 1707 161 0 23 chr17 24466635 24466934 -60971546 - AluJo SINE Alu -20 292 1 615 175 23 128 chr17 24466934 24467003 -60971477 + Charlie5 DNA MER1_type 2430 2505 -80 2192 107 0 3 chr17 24467003 24467311 -60971169 - AluSg SINE Alu -3 307 1 615 175 23 128 chr17 24467311 24467334 -60971146 + Charlie5 DNA MER1_type 2505 2529 -56 750 157 16 0 chr17 24467334 24467455 -60971025 + FLAM_A SINE Alu 2 124 -9 615 175 23 128 chr17 24467455 24467549 -60970931 + Charlie5 DNA MER1_type 2529 2585 0 589 299 26 26 chr17 24468036 24468230 -60970250 + MIR SINE MIR 68 261 -1 846 173 0 0 chr17 24468487 24468620 -60969860 + FLAM_C SINE Alu 1 133 0 1923 108 56 95 chr17 24468640 24469030 -60969450 - THE1C LTR MaLR 0 375 1 834 197 0 0 chr17 24469036 24469188 -60969292 + AluJb SINE Alu 144 295 -17 324 165 29 107 chr17 24469328 24469431 -60969049 + LTR67 LTR ERVL 461 555 -2 277 154 19 0 chr17 24469686 24469738 -60968742 + MIR SINE MIR 80 132 -130 186 103 0 0 chr17 24469744 24469773 -60968707 + (CA)n Simple_repeat Simple_repeat 2 30 0 2160 96 0 0 chr17 24469773 24470065 -60968415 - AluSc SINE Alu -17 292 1 343 183 0 0 chr17 24470079 24470139 -60968341 - MLT2C1 LTR ERVL -51 346 287 * 440 203 42 70 chr17 24470089 24470232 -60968248 - MLT1E3 LTR MaLR -421 203 65 * 847 151 0 7 chr17 24470136 24470275 -60968205 - MLT2C1 LTR ERVL -259 138 1 260 263 105 11 chr17 24470275 24470370 -60968110 + MIR SINE MIR 143 246 -16 595 215 77 82 chr17 24470437 24470632 -60967848 - MIR SINE MIR -1 261 68 1988 134 0 28 chr17 24471480 24471616 -60966864 + AluJb SINE Alu 1 139 -173 2159 97 13 6 chr17 24471616 24471927 -60966553 + AluSq SINE Alu 1 313 0 1988 134 0 28 chr17 24471927 24472111 -60966369 + AluJb SINE Alu 139 312 0 1260 258 70 38 chr17 24473241 24473613 -60964867 + LTR16C LTR ERVL 73 456 -35 221 328 0 0 chr17 24473636 24473703 -60964777 + L2 LINE L2 2638 2704 -610 324 0 0 0 chr17 24473703 24473739 -60964741 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 833 134 0 0 chr17 24473750 24473869 -60964611 - FLAM_C SINE Alu -24 119 1 925 300 160 10 chr17 24473871 24474397 -60964083 + L2 LINE L2 2689 3313 0 581 361 91 12 chr17 24474394 24474823 -60963657 - L2 LINE L2 -698 2616 2154 * 499 323 112 36 chr17 24475058 24475414 -60963066 - L2 LINE L2 -1174 2140 1758 280 198 111 12 chr17 24475420 24475501 -60962979 + L1ME3 LINE L1 5620 5708 -454 2014 113 0 7 chr17 24475501 24475829 -60962651 - AluSx SINE Alu 0 328 3 1056 135 6 12 chr17 24475834 24476047 -60962433 - AluSg/x SINE Alu 0 337 126 546 168 0 107 chr17 24476061 24476180 -60962300 + L1ME3 LINE L1 6028 6129 -33 2217 104 0 0 chr17 24476180 24476477 -60962003 + AluSp SINE Alu 1 297 -16 546 168 0 107 chr17 24476477 24476506 -60961974 + L1ME3 LINE L1 6129 6160 -2 561 128 0 0 chr17 24476519 24476597 -60961883 + AluS SINE Alu 2 79 -233 2439 55 7 0 chr17 24476604 24476913 -60961567 - AluSp SINE Alu -2 311 1 1738 109 0 4 chr17 24476913 24477160 -60961320 + AluSg SINE Alu 64 310 0 1994 220 65 33 chr17 24477318 24477356 -60961124 + L1MC4 LINE L1 7288 7323 -719 1795 168 7 0 chr17 24477356 24477654 -60960826 - AluJo SINE Alu -12 300 1 1994 220 65 33 chr17 24477654 24477910 -60960570 + L1MC4 LINE L1 7323 7569 -473 2141 110 0 3 chr17 24477910 24478209 -60960271 + AluSg SINE Alu 1 298 -12 1994 220 65 33 chr17 24478209 24478486 -60959994 + L1MC4 LINE L1 7569 7878 -164 696 148 0 0 chr17 24478486 24478594 -60959886 - FLAM_A SINE Alu -15 127 20 656 168 64 69 chr17 24478596 24478769 -60959711 + L1MC4 LINE L1 7871 8042 0 1692 160 14 3 chr17 24478793 24479086 -60959394 + AluJb SINE Alu 3 298 -14 22 0 0 0 chr17 24479136 24479158 -60959322 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr17 24479406 24479443 -60959037 + (CA)n Simple_repeat Simple_repeat 2 38 0 713 332 4 27 chr17 24479497 24479753 -60958727 + MIR SINE MIR 1 250 -12 378 259 53 38 chr17 24479876 24480007 -60958473 - MIR SINE MIR -57 205 73 1623 114 9 0 chr17 24480025 24480253 -60958227 - MER30 DNA MER1_type 0 230 1 2099 102 60 0 chr17 24480806 24481090 -60957390 - AluSg SINE Alu -7 303 3 257 50 0 25 chr17 24481465 24481505 -60956975 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 281 324 49 0 chr17 24481574 24481676 -60956804 + MIR3 SINE MIR 85 191 -17 591 193 36 50 chr17 24482359 24482499 -60955981 - LTR67 LTR ERVL -2 555 418 195 280 89 116 chr17 24482771 24482872 -60955608 - MIR SINE MIR -6 256 154 1655 176 6 43 chr17 24482872 24483196 -60955284 - AluJo SINE Alu 0 312 1 195 280 89 116 chr17 24483196 24483256 -60955224 - MIR SINE MIR -108 154 100 2288 172 80 11 chr17 24483256 24483693 -60954787 + MLT1C LTR MaLR 1 467 0 195 280 89 116 chr17 24483693 24483755 -60954725 - MIR SINE MIR -162 100 38 506 301 96 4 chr17 24483865 24484104 -60954376 - L2 LINE L2 -925 2389 2129 833 274 112 47 chr17 24484105 24484425 -60954055 + MLT1J LTR MaLR 2 361 -150 2293 143 58 15 chr17 24484425 24484837 -60953643 - MSTB1 LTR MaLR 0 432 3 833 274 112 47 chr17 24484837 24484962 -60953518 + MLT1J LTR MaLR 361 476 -35 1331 186 47 99 chr17 24485387 24485769 -60952711 - MLT1A1 LTR MaLR -1 364 3 5587 67 12 0 chr17 24485854 24486537 -60951943 - LTR8 LTR ERV1 0 691 1 252 276 23 23 chr17 24486586 24486673 -60951807 + MLT1K LTR MaLR 502 588 0 415 329 179 24 chr17 24486675 24486935 -60951545 - L2 LINE L2 -1253 2061 1843 186 43 0 0 chr17 24486935 24486958 -60951522 + (GGAAA)n Simple_repeat Simple_repeat 1 23 0 415 329 179 24 chr17 24486958 24487620 -60950860 - L2 LINE L2 -1471 1843 996 2269 48 17 17 chr17 24488090 24488409 -60950071 + AluY SINE Alu 1 311 0 969 123 0 0 chr17 24488793 24488931 -60949549 - AluJo SINE Alu -39 273 136 4128 113 38 13 chr17 24488937 24489565 -60948915 + LTR9B LTR ERV1 1 644 0 1963 74 4 4 chr17 24489932 24490175 -60948305 - AluSp SINE Alu -70 243 1 354 239 0 11 chr17 24490269 24490357 -60948123 - MLT1K LTR MaLR 0 588 502 217 225 0 0 chr17 24490358 24490398 -60948082 - L2 LINE L2 -9 3304 3265 1253 178 29 29 chr17 24490872 24491113 -60947367 + MIR SINE MIR 10 250 -12 201 39 0 0 chr17 24493947 24493973 -60944507 + (TG)n Simple_repeat Simple_repeat 2 27 0 1793 226 48 12 chr17 24494332 24494850 -60943630 + MLT1F LTR MaLR 1 533 -9 499 259 108 0 chr17 24494857 24494996 -60943484 - MIR SINE MIR 0 262 109 1286 217 74 50 chr17 24495031 24495409 -60943071 + LTR16A1 LTR ERVL 68 454 -3 246 263 145 0 chr17 24495417 24495437 -60943043 - MIR SINE MIR -158 104 88 1607 186 117 17 chr17 24495437 24495797 -60942683 + MSTD LTR MaLR 1 396 0 246 263 145 0 chr17 24495797 24495852 -60942628 - MIR SINE MIR -174 88 18 1649 130 8 42 chr17 24495882 24496144 -60942336 - AluJo SINE Alu -59 253 1 1628 211 23 46 chr17 24496412 24496847 -60941633 + MLT1C LTR MaLR 43 467 0 286 214 14 57 chr17 24496931 24497001 -60941479 - AluJo SINE Alu -141 161 95 288 77 0 0 chr17 24497039 24497078 -60941402 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 206 254 61 97 chr17 24497078 24497137 -60941343 - MIR SINE MIR -69 139 84 2200 132 15 26 chr17 24497137 24497478 -60941002 - MER1B DNA MER1_type 0 337 1 206 254 61 97 chr17 24497478 24497532 -60940948 - MIR SINE MIR -124 84 30 348 202 36 24 chr17 24498516 24498600 -60939880 + L2 LINE L2 3183 3267 -5 * 520 297 74 26 chr17 24498599 24498826 -60939654 + MIR SINE MIR 21 256 -6 3302 177 26 17 chr17 24499372 24500022 -60938458 + L1MB5 LINE L1 5519 6174 0 2402 43 30 27 chr17 24500103 24500403 -60938077 + AluY SINE Alu 1 301 -10 989 193 0 6 chr17 24500567 24500733 -60937747 - AluJb SINE Alu -15 297 133 2281 114 3 0 chr17 24500737 24501034 -60937446 - AluSx SINE Alu -12 300 3 315 287 69 0 chr17 24501038 24501139 -60937341 + MER5A DNA MER1_type 52 159 -30 202 227 0 23 chr17 24501572 24501616 -60936864 - MIR SINE MIR -3 259 217 * 205 231 0 0 chr17 24501585 24501624 -60936856 - L2 LINE L2 -21 3292 3254 1283 92 0 0 chr17 24501647 24501810 -60936670 - AluSc SINE Alu -5 304 142 256 254 263 34 chr17 24501826 24501944 -60936536 - MIR SINE MIR -98 164 20 1996 149 0 17 chr17 24502115 24502417 -60936063 + AluJb SINE Alu 1 297 -15 326 157 0 0 chr17 24502494 24502571 -60935909 + AluSp/q SINE Alu 235 311 0 310 222 89 33 chr17 24502690 24502780 -60935700 + MIR SINE MIR 2 96 -166 305 298 105 26 chr17 24503427 24503541 -60934939 - MIR SINE MIR -8 254 132 643 278 126 9 chr17 24503549 24503779 -60934701 - MIR SINE MIR -4 258 2 421 307 103 35 chr17 24504443 24504870 -60933610 - L2 LINE L2 -47 3266 2811 1763 148 14 24 chr17 24505057 24505347 -60933133 + AluJb SINE Alu 12 298 -14 194 294 50 69 chr17 24505422 24505640 -60932840 + L2 LINE L2 2848 3061 -211 264 345 11 11 chr17 24505778 24505865 -60932615 + MIR SINE MIR 43 129 -79 602 259 39 15 chr17 24505865 24506070 -60932410 - LTR16C LTR ERVL -9 482 273 752 201 41 24 chr17 24506073 24506242 -60932238 - MER5B DNA MER1_type -6 172 1 431 232 42 0 chr17 24506242 24506337 -60932143 - LTR16C LTR ERVL -208 283 185 223 306 216 0 chr17 24506478 24506589 -60931891 + MIR SINE MIR 125 259 -3 185 339 0 46 chr17 24506606 24506671 -60931809 + L2 LINE L2 3235 3296 -17 862 144 7 33 chr17 24506803 24506956 -60931524 - MER5B DNA MER1_type -6 172 24 231 354 31 10 chr17 24507257 24507353 -60931127 - L2 LINE L2 -6 3266 3169 2393 101 0 0 chr17 24507520 24507818 -60930662 - AluSg SINE Alu -12 298 1 765 244 120 22 chr17 24507932 24508157 -60930323 - MIR SINE MIR 0 262 16 332 285 70 51 chr17 24609121 24609279 -60829201 - L1ME4a LINE L1 -2 6119 5959 713 286 101 48 chr17 24609297 24609752 -60828728 - L1ME4a LINE L1 -205 5916 5438 216 0 0 0 chr17 24609920 24609944 -60828536 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 2367 71 14 0 chr17 24609948 24610228 -60828252 - AluSp SINE Alu -29 284 1 289 247 50 24 chr17 24610387 24610504 -60827976 + MIR3 SINE MIR 72 193 -15 1094 255 185 17 chr17 24610600 24611134 -60827346 - L2 LINE L2 -5 3308 2692 417 240 53 60 chr17 24611750 24611900 -60826580 + L2 LINE L2 3164 3312 -1 2109 141 0 6 chr17 24612182 24612494 -60825986 - AluJb SINE Alu 0 312 3 452 204 142 40 chr17 24612521 24612717 -60825763 - MIR SINE MIR -51 211 2 369 298 92 8 chr17 24612783 24612914 -60825566 + MIR SINE MIR 118 259 -3 180 176 0 0 chr17 24615203 24615237 -60823243 + CT-rich Low_complexity Low_complexity 2 35 0 1837 150 7 7 chr17 24615327 24615613 -60822867 - AluJb SINE Alu -26 286 1 1270 281 41 18 chr17 24616069 24616561 -60821919 - MLT1D LTR MaLR 0 505 3 428 247 107 49 chr17 24616563 24616725 -60821755 - MIR SINE MIR -80 182 10 181 298 106 11 chr17 24616842 24616936 -60821544 - L3b LINE CR1 -134 1449 1347 403 264 66 8 chr17 24617466 24617587 -60820893 - MIR SINE MIR -86 176 49 182 121 61 0 chr17 24617612 24617645 -60820835 + MIR SINE MIR 40 74 -134 234 330 133 6 chr17 24618048 24618221 -60820259 - MIR SINE MIR -36 226 32 336 320 160 5 chr17 24618357 24618557 -60819923 - MIR SINE MIR -2 260 30 1929 168 0 3 chr17 24619151 24619448 -60819032 + AluJo SINE Alu 1 296 -16 194 244 0 0 chr17 24620451 24620492 -60817988 + MIR SINE MIR 62 102 -106 378 236 111 14 chr17 24621752 24621896 -60816584 + MIR SINE MIR 28 185 -77 458 200 296 0 chr17 24621967 24622092 -60816388 + MER5A DNA MER1_type 22 183 -6 1939 189 41 67 chr17 24623601 24624066 -60814414 + MER21B LTR ERV1 13 465 -398 597 126 0 0 chr17 24624085 24624172 -60814308 + AluJ/FLAM SINE Alu 1 87 -225 2799 137 2 28 chr17 24624206 24624673 -60813807 + LTR24 LTR ERV1 13 467 0 495 209 75 66 chr17 24624673 24624925 -60813555 + MER21B LTR ERV1 475 802 -61 352 293 88 54 chr17 24624954 24625305 -60813175 + L2 LINE L2 2498 2860 -454 299 364 67 47 chr17 24625323 24625620 -60812860 + L2 LINE L2 2970 3272 0 493 318 30 56 chr17 24625633 24625750 -60812730 + MIR SINE MIR 3 122 -140 2015 124 3 46 chr17 24625750 24626073 -60812407 - AluJb SINE Alu 0 312 4 493 318 30 56 chr17 24626073 24626222 -60812258 + MIR SINE MIR 122 262 0 310 109 55 0 chr17 24626222 24626277 -60812203 + MIR SINE MIR 126 183 -79 260 325 20 33 chr17 24626625 24626776 -60811704 - MIR3 SINE MIR -57 151 3 2257 107 0 31 chr17 24626927 24627246 -60811234 + AluSc SINE Alu 1 309 0 747 118 0 76 chr17 24627316 24627460 -60811020 + FLAM_C SINE Alu 1 133 0 189 0 0 0 chr17 24627614 24627635 -60810845 + (T)n Simple_repeat Simple_repeat 1 21 0 271 298 71 0 chr17 24627648 24627732 -60810748 - L2 LINE L2 -27 3286 3197 809 147 55 133 chr17 24628043 24628261 -60810219 + MER63A DNA MER1_type 1 201 -9 360 327 13 32 chr17 24628311 24628467 -60810013 + MIR SINE MIR 2 154 -108 206 328 127 8 chr17 24628497 24628631 -60809849 + L2 LINE L2 2915 3064 -208 4578 116 8 23 chr17 24628633 24629360 -60809120 + MER4E LTR ERV1 1 716 -50 1958 118 59 7 chr17 24629467 24629739 -60808741 - AluJb SINE Alu -26 286 1 193 337 145 0 chr17 24629879 24629962 -60808518 - L2 LINE L2 0 3272 3178 22 0 0 0 chr17 24629964 24629986 -60808494 + AT_rich Low_complexity Low_complexity 1 22 0 679 230 152 17 chr17 24629986 24630216 -60808264 - MIR SINE MIR 0 262 2 311 216 54 41 chr17 24630251 24630355 -60808125 - MIR SINE MIR -42 220 113 1845 75 0 4 chr17 24630355 24630582 -60807898 + AluY SINE Alu 84 309 -2 311 216 54 41 chr17 24630582 24630593 -60807887 - MIR SINE MIR -149 113 104 230 236 0 0 chr17 24631400 24631455 -60807025 + L2 LINE L2 2244 2298 -1016 459 266 18 0 chr17 24631560 24631669 -60806811 - L2 LINE L2 -1 3312 3202 2034 136 33 0 chr17 24631820 24632121 -60806359 + AluSx SINE Alu 1 311 -1 265 260 50 20 chr17 24632137 24632237 -60806243 + L2 LINE L2 2662 2764 -550 1869 148 3 0 chr17 24632305 24632588 -60805892 + AluJb SINE Alu 2 285 -27 21 0 0 0 chr17 24632588 24632609 -60805871 + AT_rich Low_complexity Low_complexity 1 21 0 257 337 0 10 chr17 24632827 24632928 -60805552 + MIR SINE MIR 45 144 -64 258 138 75 138 chr17 24632935 24633015 -60805465 + L1ME2 LINE L1 6034 6108 -56 1756 147 0 51 chr17 24633019 24633331 -60805149 - AluJb SINE Alu -16 296 1 201 94 0 0 chr17 24634015 24634047 -60804433 + (CTGGGG)n Simple_repeat Simple_repeat 2 33 0 294 340 96 44 chr17 24635362 24635706 -60802774 + L2 LINE L2 2902 3263 -9 2151 120 0 0 chr17 24635951 24636251 -60802229 - AluSx SINE Alu -12 300 1 642 195 0 18 chr17 24636502 24636615 -60801865 + FLAM_A SINE Alu 11 121 -21 247 206 14 41 chr17 24636705 24636778 -60801702 - MIR SINE MIR -70 138 68 544 346 119 14 chr17 24636878 24637537 -60800943 + L2 LINE L2 2235 3106 -166 762 273 28 36 chr17 24638378 24638631 -60799849 + MIR SINE MIR 2 252 -10 522 302 126 34 chr17 24638720 24639078 -60799402 - L2 LINE L2 0 3272 2882 466 159 106 98 chr17 24639122 24639254 -60799226 + FLAM_C SINE Alu 1 133 0 201 74 0 0 chr17 24639271 24639298 -60799182 + (A)n Simple_repeat Simple_repeat 1 27 0 403 243 48 5 chr17 24639310 24639499 -60798981 + L1ME LINE L1 5255 5451 -908 224 290 194 21 chr17 24639499 24639685 -60798795 + L2 LINE L2 2959 3176 -137 2497 65 0 0 chr17 24639733 24640043 -60798437 + AluY SINE Alu 1 310 -1 245 323 20 20 chr17 24640257 24640356 -60798124 + L1ME LINE L1 5643 5741 -380 1283 141 13 22 chr17 24640472 24640724 -60797756 + AluJo SINE Alu 87 336 0 369 351 93 25 chr17 24640922 24641274 -60797206 - L2 LINE L2 -272 3000 2625 2162 110 0 0 chr17 24641345 24641637 -60796843 + AluSx SINE Alu 1 292 -20 1233 177 0 56 chr17 24641786 24642035 -60796445 - AluJo SINE Alu -77 235 1 512 254 15 15 chr17 24642038 24642172 -60796308 - MIR SINE MIR -113 149 16 2200 117 0 3 chr17 24642253 24642562 -60795918 + AluSx SINE Alu 1 308 -4 894 162 0 0 chr17 24642573 24642715 -60795765 + FLAM_C SINE Alu 1 142 -1 1890 130 9 48 chr17 24642750 24643066 -60795414 - AluSx SINE Alu -8 304 1 328 280 80 8 chr17 24643068 24643193 -60795287 - MIR SINE MIR -55 153 20 750 145 0 83 chr17 24643509 24643654 -60794826 - FLAM_C SINE Alu -10 133 1 2144 94 10 3 chr17 24643728 24644027 -60794453 - AluSx SINE Alu -11 301 1 1843 151 20 0 chr17 24644344 24644642 -60793838 - AluJb SINE Alu -2 310 7 1273 108 187 42 chr17 24644792 24645033 -60793447 - AluSx SINE Alu -16 296 21 2082 85 3 50 chr17 24645039 24645357 -60793123 - AluSx SINE Alu -8 304 2 256 264 0 29 chr17 24646627 24646697 -60791783 + MIR SINE MIR 75 143 -67 25 31 0 0 chr17 24647035 24647067 -60791413 + GC_rich Low_complexity Low_complexity 1 32 0 256 255 85 0 chr17 24648079 24648173 -60790307 - MIR SINE MIR -77 185 84 201 250 54 0 chr17 24648361 24648417 -60790063 - MIR SINE MIR -57 151 93 300 305 51 0 chr17 24648698 24648816 -60789664 - MIR SINE MIR -48 214 91 213 288 45 0 chr17 24651133 24651199 -60787281 + MIR SINE MIR 35 103 -159 646 173 0 0 chr17 24652668 24652772 -60785708 + FRAM SINE Alu 66 169 -7 1545 178 4 22 chr17 24652788 24653064 -60785416 + AluJo SINE Alu 3 273 -39 2112 113 0 16 chr17 24653077 24653387 -60785093 + AluSg SINE Alu 1 305 -5 276 281 245 10 chr17 24656126 24656318 -60782162 + MIR SINE MIR 20 256 -6 1693 157 7 33 chr17 24656524 24656823 -60781657 - AluJb SINE Alu -21 291 1 896 150 0 0 chr17 24656827 24656960 -60781520 - AluSq/x SINE Alu -179 133 1 1962 114 37 7 chr17 24659080 24659379 -60779101 + AluSx SINE Alu 1 308 -4 1967 107 3 21 chr17 24659400 24659715 -60778765 - AluSq SINE Alu 0 310 1 463 299 98 11 chr17 24660849 24661023 -60777457 - MIR3 SINE MIR -18 190 2 205 316 82 41 chr17 24662896 24663092 -60775388 - L2 LINE L2 -13 3300 3097 2029 115 3 0 chr17 24663681 24664010 -60774470 - AluSp SINE Alu 0 330 1 408 327 215 8 chr17 24664342 24664602 -60773878 - L2 LINE L2 -1 3271 2958 1410 105 0 5 chr17 24665798 24665998 -60772482 - AluSc SINE Alu -13 296 98 2312 86 0 3 chr17 24666497 24666798 -60771682 + AluSx SINE Alu 1 300 -12 2047 135 0 3 chr17 24666801 24667105 -60771375 + AluSc SINE Alu 3 305 -4 355 232 117 40 chr17 24667196 24667329 -60771151 - MIR SINE MIR -69 139 3 189 242 97 0 chr17 24668103 24668165 -60770315 - L2 LINE L2 -65 3248 3181 468 267 56 28 chr17 24669027 24669207 -60769273 - MIR SINE MIR -77 185 1 334 329 100 0 chr17 24669443 24669613 -60768867 + MIR SINE MIR 2 188 -74 937 146 61 85 chr17 24669698 24669910 -60768570 - AluJo SINE Alu -20 292 86 2080 86 10 33 chr17 24670606 24670907 -60767573 - AluSp SINE Alu -11 302 9 342 326 124 0 chr17 24675217 24675410 -60763070 + MIR SINE MIR 22 238 -24 269 304 0 64 chr17 24675570 24675695 -60762785 + MIR SINE MIR 113 229 -33 23 0 0 0 chr17 24676162 24676185 -60762295 + AT_rich Low_complexity Low_complexity 1 23 0 1047 164 0 0 chr17 24676223 24676394 -60762086 - AluJb SINE Alu -92 220 50 494 305 7 19 chr17 24676510 24676664 -60761816 - MIR SINE MIR -108 154 3 1832 170 0 3 chr17 24678291 24678603 -60759877 + AluJb SINE Alu 1 311 -1 1994 140 0 22 chr17 24680072 24680387 -60758093 - AluJb SINE Alu -4 308 1 653 173 9 0 chr17 24681071 24681181 -60757299 + FLAM_A SINE Alu 6 116 -26 627 237 211 23 chr17 24681342 24681650 -60756830 - L2 LINE L2 -19 3294 2929 1260 171 5 0 chr17 24681668 24681878 -60756602 + AluJo SINE Alu 1 211 -101 601 268 105 58 chr17 24681935 24682278 -60756202 - L2 LINE L2 -406 2908 2550 205 274 9 104 chr17 24682349 24682455 -60756025 + L2 LINE L2 3172 3267 -5 485 183 19 29 chr17 24684629 24684733 -60753747 - L2 LINE L2 -2 3270 3168 268 334 129 30 chr17 24684729 24685135 -60753345 + L2 LINE L2 2647 3094 -178 * 1891 164 3 0 chr17 24685387 24685686 -60752794 - AluJb SINE Alu -12 300 1 229 197 169 141 chr17 24685809 24685951 -60752529 + Charlie8 DNA MER1_type 36 181 -2236 315 0 0 0 chr17 24686228 24686263 -60752217 + (TG)n Simple_repeat Simple_repeat 2 36 0 235 365 34 20 chr17 24686441 24686589 -60751891 + L2 LINE L2 2861 3010 -262 488 238 56 14 chr17 24686923 24687066 -60751414 + L2 LINE L2 3122 3270 -2 208 206 96 14 chr17 24688068 24688141 -60750339 + MIR SINE MIR 65 143 -65 908 156 52 0 chr17 24688525 24688679 -60749801 - FAM SINE Alu -13 162 1 2109 133 0 19 chr17 24689080 24689251 -60749229 - AluSx SINE Alu -10 302 138 2476 69 10 0 chr17 24689251 24689556 -60748924 - AluSp SINE Alu -5 308 1 2109 133 0 19 chr17 24689556 24689692 -60748788 - AluSx SINE Alu -174 138 1 218 271 71 0 chr17 24689692 24689762 -60748718 - MIR SINE MIR -71 191 117 1768 141 20 46 chr17 24692065 24692371 -60746109 + AluJb SINE Alu 1 298 -14 215 245 41 0 chr17 24694152 24694201 -60744279 + L2 LINE L2 3222 3272 0 373 224 0 12 chr17 24695174 24695259 -60743221 + MIR3 SINE MIR 94 177 -31 1685 144 58 11 chr17 24695333 24695610 -60742870 - AluJb SINE Alu -22 290 1 2051 73 117 7 chr17 24695637 24695911 -60742569 + AluSx SINE Alu 1 304 -8 424 300 79 0 chr17 24696227 24696367 -60742113 + MIR SINE MIR 86 236 -26 2132 114 23 7 chr17 24696792 24697100 -60741380 + AluSq SINE Alu 1 313 0 417 20 0 0 chr17 24697485 24697535 -60740945 + (CA)n Simple_repeat Simple_repeat 1 50 0 1599 163 50 4 chr17 24697610 24697887 -60740593 + AluJo SINE Alu 2 291 -21 1950 154 133 26 chr17 24698269 24698722 -60739758 + MLT1D LTR MaLR 1 501 -4 1004 158 43 0 chr17 24700580 24700744 -60737736 + AluJo SINE Alu 2 172 -140 219 208 104 0 chr17 24702084 24702161 -60736319 - L2 LINE L2 -2509 805 721 1449 137 136 30 chr17 24702828 24702923 -60735557 + Tigger7 DNA MER2_type 228 311 -2176 1706 130 60 0 chr17 24702923 24703192 -60735288 + AluJo SINE Alu 1 285 -27 1449 137 136 30 chr17 24703192 24703542 -60734938 + Tigger7 DNA MER2_type 311 2479 -8 1863 153 28 0 chr17 24703602 24703890 -60734590 + AluSx SINE Alu 1 296 -16 2204 123 3 3 chr17 24703890 24704191 -60734289 + AluSx SINE Alu 1 301 -11 483 190 146 7 chr17 24704201 24704338 -60734142 - MIR3 SINE MIR -23 185 30 997 158 148 6 chr17 24704727 24704910 -60733570 + AluJo SINE Alu 85 293 -19 294 367 22 7 chr17 24705764 24705903 -60732577 + MIR3 SINE MIR 54 194 -14 488 256 53 0 chr17 24706147 24706280 -60732200 + L1MC1 LINE L1 5071 5210 -936 * 3021 166 22 20 chr17 24706273 24706829 -60731651 + L1MC1 LINE L1 5572 6128 -205 371 134 0 15 chr17 24706873 24706940 -60731540 + L1MC1 LINE L1 6264 6329 -4 604 149 79 0 chr17 24707457 24707571 -60730909 + FLAM_A SINE Alu 20 142 0 781 199 7 14 chr17 24707776 24707922 -60730558 + AluJb SINE Alu 119 263 -49 1835 56 0 0 chr17 24707946 24708159 -60730321 - AluY SINE Alu -13 298 86 974 227 44 31 chr17 24708208 24708529 -60729951 - L1M4 LINE L1 -1000 5146 4822 1406 177 57 32 chr17 24708958 24709087 -60729393 + AluJo SINE Alu 1 125 -187 1767 142 33 30 chr17 24709087 24709389 -60729091 + AluSx SINE Alu 1 303 -9 1406 177 57 32 chr17 24709389 24709542 -60728938 + AluJo SINE Alu 125 290 -22 1389 158 37 64 chr17 24709598 24709895 -60728585 - AluJo SINE Alu -18 294 6 21 0 0 0 chr17 24710177 24710198 -60728282 + AT_rich Low_complexity Low_complexity 1 21 0 208 135 0 0 chr17 24710250 24710287 -60728193 + (T)n Simple_repeat Simple_repeat 1 37 0 306 138 46 0 chr17 24710390 24710455 -60728025 - L1MB4 LINE L1 -1 6179 6112 557 143 29 9 chr17 24710471 24710576 -60727904 + FLAM_A SINE Alu 20 126 -16 453 135 11 56 chr17 24710576 24710665 -60727815 - L1MB3 LINE L1 -59 6124 6040 220 273 73 0 chr17 24710730 24710785 -60727695 - L2 LINE L2 -74 3198 3140 24 53 0 0 chr17 24710838 24710876 -60727604 + AT_rich Low_complexity Low_complexity 1 38 0 318 24 0 0 chr17 24711041 24711083 -60727397 - L1PA6 LINE L1 -2 6152 6111 398 127 0 16 chr17 24711554 24711617 -60726863 - LTR12 LTR ERV1 -631 83 22 5078 119 27 5 chr17 24711679 24712468 -60726012 + MER109 Unknown Unknown 1599 2404 -28 1958 152 0 3 chr17 24712616 24712912 -60725568 - AluJb SINE Alu -17 295 1 212 130 0 43 chr17 24713006 24713052 -60725428 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 2029 144 10 0 chr17 24713635 24713940 -60724540 + AluSx SINE Alu 1 308 -4 2116 132 0 7 chr17 24714161 24714457 -60724023 + AluSq SINE Alu 1 294 -19 28 61 0 0 chr17 24714460 24714509 -60723971 + AT_rich Low_complexity Low_complexity 1 49 0 1961 109 47 4 chr17 24714994 24715304 -60723176 - AluSx SINE Alu 0 324 3 27 0 0 0 chr17 24716142 24716169 -60722311 + AT_rich Low_complexity Low_complexity 1 27 0 925 125 0 21 chr17 24716433 24716577 -60721903 - AluSg/x SINE Alu -2 308 168 387 0 0 0 chr17 24716863 24716906 -60721574 + (TG)n Simple_repeat Simple_repeat 2 44 0 2145 105 0 11 chr17 24716913 24717198 -60721282 - AluSx SINE Alu -30 282 1 26 0 0 0 chr17 24717259 24717285 -60721195 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 24717338 24717368 -60721112 + AT_rich Low_complexity Low_complexity 1 30 0 620 114 9 44 chr17 24717398 24717512 -60720968 + AluJb SINE Alu 202 311 -1 2261 93 0 29 chr17 24717601 24717914 -60720566 + AluSg SINE Alu 1 304 -6 1579 118 141 15 chr17 24717926 24718196 -60720284 + AluSx SINE Alu 1 304 -8 2189 60 52 0 chr17 24719092 24719380 -60719100 - AluY SINE Alu 0 302 1 2056 101 42 3 chr17 24719698 24719984 -60718496 + AluSx SINE Alu 1 297 -15 192 77 0 0 chr17 24720437 24720463 -60718017 + (TA)n Simple_repeat Simple_repeat 2 27 0 1774 169 3 0 chr17 24720545 24720829 -60717651 + AluJb SINE Alu 14 298 -14 923 118 0 0 chr17 24721558 24721708 -60716772 - AluSg/x SINE Alu 0 308 159 425 189 11 0 chr17 24721708 24721803 -60716677 + (TA)n Simple_repeat Simple_repeat 1 96 0 2126 112 10 3 chr17 24722016 24722311 -60716169 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 24722976 24722999 -60715481 + AT_rich Low_complexity Low_complexity 1 23 0 820 145 0 51 chr17 24723659 24723797 -60714683 + FLAM_C SINE Alu 1 131 -12 2218 97 4 0 chr17 24724105 24724408 -60714072 - AluSg SINE Alu 0 304 1 1671 153 32 51 chr17 24724868 24725182 -60713298 + AluJb SINE Alu 1 308 -4 1908 130 13 23 chr17 24725389 24725689 -60712791 + AluJo SINE Alu 1 297 -15 566 97 11 21 chr17 24725701 24725794 -60712686 - L1MB2 LINE L1 -18 6153 6062 2248 122 0 3 chr17 24726109 24726420 -60712060 - AluSg SINE Alu 0 310 1 286 212 88 88 chr17 24728134 24728271 -60710209 + L1M1 LINE L1 4910 5046 -1100 940 73 81 0 chr17 24728362 24728486 -60709994 - MER85 DNA T2_type -5 134 1 1690 166 17 27 chr17 24728501 24728797 -60709683 + AluJo SINE Alu 1 293 -19 2306 105 0 7 chr17 24728992 24729296 -60709184 - AluSx SINE Alu -10 302 1 250 288 64 24 chr17 24729379 24729504 -60708976 + L1M1 LINE L1 5500 5629 -676 1681 171 17 10 chr17 24729504 24729796 -60708684 - AluJo SINE Alu -16 296 3 2316 92 3 0 chr17 24729809 24730104 -60708376 - AluSg SINE Alu -14 296 1 21 57 0 0 chr17 24730329 24730364 -60708116 + AT_rich Low_complexity Low_complexity 1 35 0 2964 3 0 0 chr17 24730595 24730906 -60707574 + AluYa5 SINE Alu 1 311 0 501 200 110 0 chr17 24731143 24731243 -60707237 - FLAM_C SINE Alu -12 131 21 1544 177 10 31 chr17 24731347 24731635 -60706845 + AluJo SINE Alu 1 282 -30 23 0 0 0 chr17 24731716 24731739 -60706741 + AT_rich Low_complexity Low_complexity 1 23 0 2207 122 3 3 chr17 24731800 24732111 -60706369 - AluSq SINE Alu -2 311 1 770 179 0 8 chr17 24732735 24732869 -60705611 + AluJo SINE Alu 2 134 -178 1332 234 66 0 chr17 24733049 24733322 -60705158 + AluJo SINE Alu 10 300 -12 2464 93 0 3 chr17 24733585 24733895 -60704585 - AluSq SINE Alu -4 309 1 2307 100 10 3 chr17 24733955 24734255 -60704225 + AluSg SINE Alu 1 302 -8 1604 184 0 17 chr17 24734264 24734552 -60703928 + AluJb SINE Alu 1 283 -29 324 0 0 0 chr17 24734552 24734588 -60703892 + (CA)n Simple_repeat Simple_repeat 2 37 0 382 319 109 24 chr17 24734639 24734849 -60703631 - MIR SINE MIR -11 251 24 1713 167 14 44 chr17 24734964 24735281 -60703199 + AluJb SINE Alu 1 308 0 373 252 214 44 chr17 24735662 24735868 -60702612 - MIR SINE MIR -13 249 9 195 290 84 84 chr17 24736345 24736388 -60702092 - L2 LINE L2 -8 3305 3263 1596 131 161 0 chr17 24736388 24736648 -60701832 + AluSg SINE Alu 1 302 -8 195 290 84 84 chr17 24736648 24736818 -60701662 - L2 LINE L2 -49 3264 3092 2085 95 56 0 chr17 24736843 24737128 -60701352 + AluSp SINE Alu 1 301 -12 216 239 69 138 chr17 24737954 24738013 -60700467 - MER5A DNA MER1_type -63 126 64 2049 143 0 0 chr17 24738013 24738300 -60700180 + AluSx SINE Alu 1 287 -25 216 239 69 138 chr17 24738300 24738370 -60700110 - MER5A DNA MER1_type -125 64 6 407 330 32 9 chr17 24738507 24738696 -60699784 - MIR3 SINE MIR -51 211 14 2430 109 0 0 chr17 24738968 24739280 -60699200 - AluSq SINE Alu 0 313 2 2145 135 3 6 chr17 24739337 24739648 -60698832 - AluSx SINE Alu -2 310 1 2329 71 4 4 chr17 24740150 24740468 -60698012 - AluY SINE Alu 0 318 1 348 232 203 6 chr17 24740468 24740664 -60697816 - L1M2 LINE L1 -561 5560 5321 261 0 0 0 chr17 24740665 24740694 -60697786 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 236 242 124 78 chr17 24740730 24740927 -60697553 - L1M4 LINE L1 -853 5293 5072 2313 118 0 9 chr17 24740927 24741242 -60697238 - AluSx SINE Alu 0 312 1 236 242 124 78 chr17 24741242 24741391 -60697089 - L1M4 LINE L1 -1074 5072 4931 2243 125 0 3 chr17 24741423 24741720 -60696760 - AluSg SINE Alu -14 296 1 180 0 0 0 chr17 24741735 24741755 -60696725 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 192 77 0 0 chr17 24743351 24743377 -60695103 + (A)n Simple_repeat Simple_repeat 1 26 0 2324 113 0 0 chr17 24745549 24745858 -60692622 - AluSx SINE Alu -3 309 1 4222 77 44 9 chr17 24746311 24746947 -60691533 - MER4E LTR ERV1 -108 658 1 3801 110 74 21 chr17 24754538 24755265 -60683215 + MER4A-int LTR ERV1 5831 6596 -2 499 111 89 0 chr17 24755273 24755363 -60683117 + MER4A LTR ERV1 1 98 -566 1356 154 16 94 chr17 24755416 24755734 -60682746 + MER4A LTR ERV1 372 664 0 26 30 0 0 chr17 24756247 24756280 -60682200 + AT_rich Low_complexity Low_complexity 1 33 0 2145 110 7 27 chr17 24756386 24756533 -60681947 + AluSq SINE Alu 1 140 -173 6062 130 20 31 chr17 24756533 24757616 -60680864 - MER11C LTR ERVK 0 1071 1 2145 110 7 27 chr17 24757616 24757767 -60680713 + AluSq SINE Alu 140 293 -20 935 189 17 6 chr17 24757844 24758024 -60680456 - Tigger3(Golem) DNA MER2_type -1 3028 2847 3280 82 24 9 chr17 24758025 24758478 -60680002 - LTR46 LTR ERV1 0 460 1 3158 123 22 36 chr17 24758478 24758603 -60679877 - LTR46-int LTR ERV1 0 6985 6860 2116 103 58 3 chr17 24758603 24758894 -60679586 - AluSq SINE Alu -2 311 5 3158 123 22 36 chr17 24758894 24759319 -60679161 - LTR46-int LTR ERV1 -125 6860 6443 351 193 2 30 chr17 24759319 24759397 -60679083 - AluJb SINE Alu -137 165 104 2214 116 0 0 chr17 24759528 24759845 -60678635 + AluSx SINE Alu 1 317 0 2651 58 14 8 chr17 24759845 24760206 -60678274 + L1PA8 LINE L1 5805 6167 -5 338 275 0 0 chr17 24760955 24761035 -60677445 + MLT1I LTR MaLR 98 177 -232 1969 171 0 0 chr17 24761050 24761355 -60677125 - AluJb SINE Alu -7 305 1 289 261 246 0 chr17 24761736 24761874 -60676606 - MIR SINE MIR -71 191 20 262 133 67 0 chr17 24761962 24762022 -60676458 + CT-rich Low_complexity Low_complexity 1 64 0 327 357 18 29 chr17 24762256 24762427 -60676053 + MER5A DNA MER1_type 7 186 -3 188 133 0 0 chr17 24762503 24762533 -60675947 + MIR SINE MIR 118 147 -115 193 125 21 21 chr17 24763413 24763461 -60675019 + CT-rich Low_complexity Low_complexity 1 48 0 276 313 62 0 chr17 24763478 24763590 -60674890 - L2 LINE L2 -15 3257 3139 1827 170 0 34 chr17 24764692 24764870 -60673610 - AluJb SINE Alu 0 312 148 2418 82 3 0 chr17 24764870 24765162 -60673318 - AluSp SINE Alu -20 293 1 1827 170 0 34 chr17 24765162 24765306 -60673174 - AluJb SINE Alu -164 148 1 432 295 48 36 chr17 24765401 24765620 -60672860 - MIR SINE MIR -11 251 18 725 254 34 99 chr17 24766746 24766941 -60671539 - L2 LINE L2 -2 3311 3105 1966 168 7 0 chr17 24766941 24767251 -60671229 + AluJo SINE Alu 1 312 0 725 254 34 99 chr17 24767251 24767312 -60671168 - L2 LINE L2 -208 3105 3042 660 148 0 30 chr17 24767312 24767447 -60671033 - FLAM_C SINE Alu -2 131 1 725 254 34 99 chr17 24767447 24767574 -60670906 - L2 LINE L2 -271 3042 2952 2929 13 0 0 chr17 24768130 24768440 -60670040 + AluYb8 SINE Alu 1 310 -8 1910 160 7 3 chr17 24769731 24770025 -60668455 + AluJo SINE Alu 1 295 -17 277 192 0 82 chr17 24770518 24770591 -60667889 - L3 LINE CR1 -116 1461 1395 252 100 0 0 chr17 24771583 24771623 -60666857 + (CTGGGG)n Simple_repeat Simple_repeat 1 40 0 344 203 28 126 chr17 24773408 24773551 -60664929 - MIR SINE MIR -118 144 16 293 313 12 0 chr17 24773589 24773672 -60664808 - MIR3 SINE MIR -51 157 74 449 273 0 41 chr17 24773953 24774074 -60664406 + MIR SINE MIR 30 145 -63 2294 103 10 3 chr17 24774151 24774451 -60664029 - AluSx SINE Alu -10 302 1 2029 130 10 51 chr17 24775008 24775050 -60663430 - THE1C LTR MaLR 0 375 333 2127 114 41 0 chr17 24775050 24775340 -60663140 + AluSx SINE Alu 1 302 -10 2029 130 10 51 chr17 24775340 24775688 -60662792 - THE1C LTR MaLR -42 333 1 1448 154 8 0 chr17 24775732 24775979 -60662501 + MER41B LTR ERV1 1 249 -386 963 94 31 0 chr17 24775984 24776111 -60662369 - AluSq/x SINE Alu -179 133 3 1760 147 3 14 chr17 24776112 24776383 -60662097 + MER41B LTR ERV1 237 506 -129 2246 129 3 0 chr17 24776383 24776692 -60661788 - AluSp SINE Alu -3 310 1 1760 147 3 14 chr17 24776692 24776713 -60661767 + MER41B LTR ERV1 506 526 -109 561 147 164 0 chr17 24776714 24776830 -60661650 - FLAM_C SINE Alu -7 136 2 724 142 8 0 chr17 24776836 24776956 -60661524 + MER41B LTR ERV1 514 634 -1 1246 163 163 19 chr17 24777426 24777683 -60660797 - AluJb SINE Alu -18 294 1 2307 109 0 13 chr17 24777690 24778001 -60660479 - AluSx SINE Alu -5 307 1 332 256 46 51 chr17 24778124 24778313 -60660167 - MIR3 SINE MIR -58 150 9 230 336 58 0 chr17 24779038 24779142 -60659338 + MIR3 SINE MIR 60 169 -39 27 0 0 0 chr17 24779272 24779299 -60659181 + AT_rich Low_complexity Low_complexity 1 27 0 301 277 90 2 chr17 24779323 24779449 -60659031 + MLT1J2 LTR MaLR 53 227 -284 616 182 52 57 chr17 24779453 24779630 -60658850 + MLT1H1 LTR MaLR 1 170 -420 1311 182 63 82 chr17 24779630 24780009 -60658471 + MLT1B LTR MaLR 1 372 -18 1657 224 39 32 chr17 24780098 24780504 -60657976 + LTR2 LTR ERV1 41 449 0 38821 56 4 8 chr17 24780504 24788333 -60650147 + HERVE LTR ERV1 1 7812 -1 1736 219 39 34 chr17 24788422 24788829 -60649651 + LTR2 LTR ERV1 41 449 0 742 247 136 54 chr17 24788861 24789213 -60649267 + MLT1H1 LTR MaLR 175 555 0 380 279 112 43 chr17 24789213 24789471 -60649009 + MLT1J LTR MaLR 227 502 -9 33 43 0 0 chr17 24789548 24789595 -60648885 + AT_rich Low_complexity Low_complexity 1 47 0 376 221 148 27 chr17 24789936 24790085 -60648395 - L2 LINE L2 -180 3092 2926 213 268 73 12 chr17 24792159 24792241 -60646239 + MIR SINE MIR 63 149 -113 183 250 0 0 chr17 24793459 24793491 -60644989 - L2 LINE L2 -17 3296 3265 252 188 238 0 chr17 24793508 24793588 -60644892 - MIR SINE MIR -82 180 82 224 295 26 13 chr17 24793965 24794043 -60644437 - L3b LINE CR1 -95 1488 1410 6210 66 5 61 chr17 24794045 24795056 -60643424 - SVA Other Other 0 1386 433 5180 76 28 56 chr17 24795073 24796243 -60642237 - SVA Other Other -518 868 57 504 45 0 0 chr17 24796243 24796310 -60642170 + (GGGAGA)n Simple_repeat Simple_repeat 1 67 0 240 143 0 0 chr17 24796338 24796373 -60642107 + MLT1B LTR MaLR 427 461 -6 807 215 42 37 chr17 24797887 24798037 -60640443 - L2 LINE L2 -6 3307 3154 2210 114 0 0 chr17 24798037 24798345 -60640135 + AluSx SINE Alu 1 308 -4 807 215 42 37 chr17 24798345 24798385 -60640095 - L2 LINE L2 -159 3154 3116 435 211 0 0 chr17 24798388 24798464 -60640016 + AluJ/FLAM SINE Alu 1 76 -236 921 204 35 81 chr17 24798670 24798954 -60639526 - MER58B DNA MER1_type 0 341 71 419 208 0 0 chr17 24798965 24799037 -60639443 - AluJ/FLAM SINE Alu -239 73 2 2024 122 7 0 chr17 24799047 24799343 -60639137 - AluSx SINE Alu -14 298 1 306 176 235 0 chr17 24799345 24799413 -60639067 - MER58B DNA MER1_type -257 84 1 21 0 0 0 chr17 24799527 24799548 -60638932 + AT_rich Low_complexity Low_complexity 1 21 0 2209 104 3 0 chr17 24800035 24800342 -60638138 - AluSp SINE Alu -5 308 1 439 280 85 44 chr17 24800760 24800970 -60637510 - MLT1J LTR MaLR -2 509 282 2239 104 0 0 chr17 24800970 24801278 -60637202 + AluSg SINE Alu 1 308 -2 439 280 85 44 chr17 24801278 24801360 -60637120 - MLT1J LTR MaLR -229 282 205 2010 117 11 0 chr17 24801503 24801784 -60636696 - AluSx SINE Alu -24 288 5 954 205 56 8 chr17 24801859 24802093 -60636387 - L1MA9 LINE L1 -38 6274 6030 808 206 0 40 chr17 24802080 24802279 -60636201 + L1MA9 LINE L1 5846 6036 -276 * 234 329 125 29 chr17 24802374 24802614 -60635866 + L2 LINE L2 2079 2341 -973 474 260 87 7 chr17 24802631 24802781 -60635699 - MIR SINE MIR 0 262 101 197 379 0 0 chr17 24802832 24802898 -60635582 + L2 LINE L2 2398 2463 -851 972 233 18 9 chr17 24803135 24803363 -60635117 + L2 LINE L2 3084 3313 0 217 294 0 0 chr17 24803395 24803446 -60635034 + (CA)n Simple_repeat Simple_repeat 2 52 0 634 224 133 0 chr17 24803652 24803817 -60634663 + MIR SINE MIR 12 198 -64 2186 115 0 0 chr17 24804078 24804383 -60634097 + AluSx SINE Alu 1 305 -7 516 184 39 0 chr17 24804610 24804713 -60633767 + FLAM_C SINE Alu 2 108 -35 363 44 0 0 chr17 24804713 24804758 -60633722 + (TG)n Simple_repeat Simple_repeat 2 46 0 998 162 5 30 chr17 24804921 24804933 -60633547 + L1M4 LINE L1 3561 3572 -2574 2250 97 7 3 chr17 24804933 24805242 -60633238 + AluSg SINE Alu 1 310 0 998 162 5 30 chr17 24805242 24805426 -60633054 + L1M4 LINE L1 3572 3752 -2394 436 138 0 0 chr17 24805428 24805493 -60632987 + AluJ/FLAM SINE Alu 2 66 -246 304 130 0 0 chr17 24805493 24805539 -60632941 + AluS SINE Alu 40 85 -218 1347 174 20 20 chr17 24805539 24805786 -60632694 - AluJo SINE Alu -50 262 16 612 221 26 87 chr17 24805812 24805884 -60632596 - L1M4 LINE L1 -2191 3955 3880 2074 121 0 0 chr17 24805884 24806181 -60632299 - AluSx SINE Alu -15 297 1 612 221 26 87 chr17 24806181 24806339 -60632141 - L1M4 LINE L1 -2266 3880 3739 874 154 32 0 chr17 24806343 24806499 -60631981 - AluSg/x SINE Alu 0 312 152 1715 159 0 10 chr17 24806533 24806828 -60631652 + AluJb SINE Alu 1 292 -20 450 246 0 0 chr17 24806855 24806965 -60631515 + L1M4 LINE L1 4787 4896 -1250 21 0 0 0 chr17 24807102 24807123 -60631357 + AT_rich Low_complexity Low_complexity 1 21 0 2121 96 7 0 chr17 24807134 24807425 -60631055 + AluSx SINE Alu 1 293 -19 289 256 0 13 chr17 24807442 24807520 -60630960 - L1ME1 LINE L1 -23 6143 6067 * 1613 191 25 3 chr17 24807515 24807882 -60630598 + L1M4 LINE L1 4905 5279 -867 2123 125 0 0 chr17 24808221 24808532 -60629948 - AluSx SINE Alu -1 311 1 466 167 0 39 chr17 24808532 24808610 -60629870 - FRAM/FAM SINE Alu -109 67 1 435 203 0 0 chr17 24808610 24808684 -60629796 - L1M3 LINE L1 -589 5594 5521 692 203 74 42 chr17 24808684 24808901 -60629579 - Charlie2a DNA MER1_type -1143 1719 1496 603 309 18 6 chr17 24808934 24809099 -60629381 - Charlie2b DNA MER1_type -2094 688 522 576 244 143 88 chr17 24809107 24809291 -60629189 - Charlie2b DNA MER1_type -2458 324 152 2018 108 17 3 chr17 24809291 24809578 -60628902 + AluSx SINE Alu 1 291 -21 576 244 143 88 chr17 24809578 24809616 -60628864 - Charlie2b DNA MER1_type -2630 152 118 891 191 7 0 chr17 24809616 24809768 -60628712 + FRAM SINE Alu 1 153 -13 576 244 143 88 chr17 24809768 24809851 -60628629 - Charlie2b DNA MER1_type -2664 118 1 24 32 0 0 chr17 24810131 24810162 -60628318 + AT_rich Low_complexity Low_complexity 1 31 0 2165 122 0 0 chr17 24810425 24810729 -60627751 - AluSx SINE Alu -8 304 1 24 67 0 0 chr17 24812344 24812389 -60626091 + AT_rich Low_complexity Low_complexity 1 45 0 31 26 0 0 chr17 24812565 24812603 -60625877 + AT_rich Low_complexity Low_complexity 1 38 0 309 26 0 0 chr17 24812894 24812932 -60625548 + (TG)n Simple_repeat Simple_repeat 1 38 0 483 254 170 0 chr17 24813559 24813724 -60624756 + MIR SINE MIR 68 260 -2 480 245 50 70 chr17 24814287 24814487 -60623993 + LTR41 LTR ERVL 23 218 -555 375 281 10 65 chr17 24814663 24814862 -60623618 + LTR41 LTR ERVL 585 772 -1 2275 93 3 0 chr17 24815229 24815529 -60622951 - AluSp SINE Alu -12 301 1 480 189 217 0 chr17 24817467 24817573 -60620907 - AluJo SINE Alu -178 134 6 3444 149 54 7 chr17 24818313 24818890 -60619590 - Tigger4(Zombi) DNA MER2_type -2079 652 49 366 74 0 0 chr17 24818903 24818957 -60619523 + (TG)n Simple_repeat Simple_repeat 2 55 0 1646 124 47 16 chr17 24819159 24819416 -60619064 + AluSg SINE Alu 12 276 -34 1372 158 37 60 chr17 24819689 24819987 -60618493 - AluJo SINE Alu -17 295 5 2198 81 7 0 chr17 24820316 24820599 -60617881 + AluSg SINE Alu 1 285 -25 255 31 0 0 chr17 24820600 24820632 -60617848 + (CAAAC)n Simple_repeat Simple_repeat 4 35 0 2180 103 56 44 chr17 24821087 24821447 -60617033 + THE1B LTR MaLR 1 364 0 210 189 57 0 chr17 24821456 24821509 -60616971 + A-rich Low_complexity Low_complexity 2 57 0 1661 160 39 0 chr17 24822078 24822360 -60616120 + AluJb SINE Alu 1 293 -19 22 0 0 0 chr17 24822618 24822640 -60615840 + AT_rich Low_complexity Low_complexity 1 22 0 1906 117 4 4 chr17 24822926 24823246 -60615234 - AluSx SINE Alu 0 324 5 652 174 87 14 chr17 24823364 24823502 -60614978 - LTR29 LTR ERV1 -68 554 407 1607 192 17 0 chr17 24824287 24824578 -60613902 + AluJb SINE Alu 1 296 -16 640 153 119 17 chr17 24824723 24824841 -60613639 - FLAM_A SINE Alu -3 130 1 203 0 37 0 chr17 24825629 24825656 -60612824 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 325 321 151 6 chr17 24825724 24825883 -60612597 + MIR3 SINE MIR 15 196 -12 1724 158 3 10 chr17 24825887 24826190 -60612290 - AluJo SINE Alu -11 301 1 1835 151 0 43 chr17 24826318 24826493 -60611987 - AluJo SINE Alu -1 311 155 1910 109 7 20 chr17 24826493 24826795 -60611685 - AluSx SINE Alu -10 302 5 1835 151 0 43 chr17 24826795 24826943 -60611537 - AluJo SINE Alu -157 155 2 299 261 174 26 chr17 24827288 24827403 -60611077 + MIR3 SINE MIR 10 141 -67 216 0 0 0 chr17 24828018 24828042 -60610438 + (A)n Simple_repeat Simple_repeat 1 24 0 1343 185 77 45 chr17 24828072 24828188 -60610292 + AluJo SINE Alu 3 114 -188 2000 108 0 11 chr17 24828188 24828467 -60610013 - AluSx SINE Alu -36 276 1 1343 185 77 45 chr17 24828467 24828483 -60609997 + AluJo SINE Alu 114 128 -174 275 0 0 28 chr17 24828483 24828519 -60609961 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 1343 185 77 45 chr17 24828519 24828671 -60609809 + AluJo SINE Alu 128 297 -5 201 204 61 41 chr17 24829155 24829204 -60609276 + MIR3 SINE MIR 127 176 -32 576 299 32 16 chr17 24829535 24829722 -60608758 + MLT1K LTR MaLR 70 259 -329 505 232 90 102 chr17 24829790 24830200 -60608280 + MLT1L LTR MaLR 99 503 -8 1022 220 91 32 chr17 24830216 24830525 -60607955 + MLT1K LTR MaLR 258 584 -4 1473 71 165 36 chr17 24830635 24830955 -60607525 + Tigger2 DNA MER2_type 1 2579 -139 204 235 0 0 chr17 24831068 24831119 -60607361 + (TA)n Simple_repeat Simple_repeat 1 51 0 24 0 0 0 chr17 24831193 24831217 -60607263 + AT_rich Low_complexity Low_complexity 1 24 0 524 282 159 9 chr17 24831292 24831512 -60606968 + MIR SINE MIR 9 261 -1 496 195 17 103 chr17 24831936 24832110 -60606370 - L1M4 LINE L1 -2211 3935 3777 850 240 27 27 chr17 24832151 24832372 -60606108 - MIR SINE MIR -2 260 40 2259 50 10 30 chr17 24832449 24832751 -60605729 - AluY SINE Alu -15 296 1 23 54 0 0 chr17 24832893 24832930 -60605550 + AT_rich Low_complexity Low_complexity 1 37 0 218 105 81 47 chr17 24835875 24835961 -60602519 + (CTATT)n Simple_repeat Simple_repeat 2 90 0 640 273 197 25 chr17 24837563 24838099 -60600381 + L2 LINE L2 2677 3306 -7 546 267 93 61 chr17 24838076 24838323 -60600157 - MIR SINE MIR -2 260 6 * 2278 97 0 0 chr17 24838728 24839017 -60599463 + AluSq SINE Alu 1 289 -24 25 31 0 0 chr17 24839017 24839049 -60599431 + AT_rich Low_complexity Low_complexity 1 32 0 2270 91 0 36 chr17 24839562 24839871 -60598609 - AluSx SINE Alu -14 298 1 1435 146 100 43 chr17 24840067 24840347 -60598133 - AluJo SINE Alu -16 296 1 350 116 0 101 chr17 24840473 24840542 -60597938 + AluJ/FRAM SINE Alu 230 291 -11 272 326 0 11 chr17 24840858 24840950 -60597530 - L2 LINE L2 0 3313 3223 23 24 0 24 chr17 24841548 24841563 -60596917 + AT_rich Low_complexity Low_complexity 1 15 -25 1952 130 14 0 chr17 24841563 24841847 -60596633 - AluSx SINE Alu -24 288 1 23 24 0 24 chr17 24841847 24841872 -60596608 + AT_rich Low_complexity Low_complexity 15 40 0 202 308 13 13 chr17 24842512 24842590 -60595890 + L3b LINE CR1 1316 1393 -190 26 0 0 0 chr17 24842591 24842617 -60595863 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr17 24842918 24842948 -60595532 + AT_rich Low_complexity Low_complexity 1 30 0 1985 166 0 0 chr17 24843393 24843694 -60594786 - AluJo SINE Alu -11 301 1 739 80 0 0 chr17 24844595 24844695 -60593785 + AluY SINE Alu 205 304 -7 619 202 0 0 chr17 24844696 24844810 -60593670 - MER47A DNA MER2_type -252 114 1 373 168 42 87 chr17 24844858 24845083 -60593397 + Charlie7 DNA MER1_type 7 2569 -43 6967 30 5 0 chr17 24845135 24845978 -60592502 - L1PA4 LINE L1 -1044 5102 4256 7464 36 0 1 chr17 24845978 24847046 -60591434 + L1PA4 LINE L1 5085 6151 -4 347 145 92 0 chr17 24847065 24847141 -60591339 - MER3 DNA MER1_type 0 2624 2542 1951 155 3 19 chr17 24847141 24847458 -60591022 + AluJb SINE Alu 1 312 0 348 161 0 0 chr17 24847460 24847516 -60590964 - MER3 DNA MER1_type -117 92 37 570 254 102 20 chr17 24847516 24847713 -60590767 + MIR SINE MIR 50 262 0 321 255 36 16 chr17 24848175 24848287 -60590193 - MIR SINE MIR -63 145 33 869 200 0 0 chr17 24848519 24848669 -60589811 - AluJb SINE Alu -30 282 133 2075 127 0 13 chr17 24848787 24849087 -60589393 - AluSx SINE Alu -16 296 1 2360 83 0 0 chr17 24849123 24849413 -60589067 + AluY SINE Alu 1 290 -21 934 249 222 11 chr17 24851186 24851619 -60586861 + L2 LINE L2 2066 2589 -725 21 36 0 0 chr17 24851700 24851728 -60586752 + AT_rich Low_complexity Low_complexity 1 28 0 636 252 208 8 chr17 24852109 24852424 -60586056 + L2 LINE L2 2687 3061 -252 400 246 27 45 chr17 24852431 24852541 -60585939 + Tigger3(Golem) DNA MER2_type 1 108 -2921 351 125 125 0 chr17 24852541 24852613 -60585867 + Tigger3(Golem) DNA MER2_type 2285 2365 -664 923 185 85 16 chr17 24852618 24852807 -60585673 + AluJb SINE Alu 107 308 -4 3293 98 28 20 chr17 24852807 24853317 -60585163 + Tigger3(Golem) DNA MER2_type 2428 2941 -88 446 232 119 31 chr17 24853348 24853542 -60584938 + L2 LINE L2 3103 3313 0 436 320 76 12 chr17 24853531 24853703 -60584777 - MIR SINE MIR -6 256 74 * 1756 146 0 60 chr17 24853811 24853947 -60584533 + AluJb SINE Alu 1 144 -168 2176 120 3 0 chr17 24853947 24854239 -60584241 + AluSx SINE Alu 1 293 -19 1756 146 0 60 chr17 24854239 24854417 -60584063 + AluJb SINE Alu 144 296 -16 365 177 137 50 chr17 24854458 24854585 -60583895 + L1MC5 LINE L1 7109 7234 -727 267 200 31 15 chr17 24854921 24854986 -60583494 + L1MC5 LINE L1 7509 7574 -387 485 182 42 28 chr17 24855012 24855155 -60583325 + L1MC5 LINE L1 7639 7783 -178 5307 54 16 3 chr17 24855507 24856190 -60582290 - L1PA6 LINE L1 -6 6148 5457 334 285 41 24 chr17 24856292 24856376 -60582104 - L1ME LINE L1 -303 5818 5730 1956 148 6 16 chr17 24856376 24856687 -60581793 - AluSx SINE Alu -4 308 1 334 285 41 24 chr17 24856687 24856725 -60581755 - L1ME LINE L1 -391 5730 5694 307 266 92 28 chr17 24856971 24857080 -60581400 - HAL1 LINE L1 -1784 723 608 701 301 20 5 chr17 24857121 24857324 -60581156 - HAL1 LINE L1 -2108 399 194 1500 190 112 9 chr17 24857803 24858134 -60580346 + MLT1A1 LTR MaLR 1 365 0 246 95 0 0 chr17 24858149 24858191 -60580289 - Alu SINE Alu -5 298 257 430 254 53 9 chr17 24860020 24860134 -60578346 - MIR3 SINE MIR -81 127 9 327 227 248 7 chr17 24860284 24860425 -60578055 - MIR SINE MIR -7 255 81 381 314 72 26 chr17 24860653 24860806 -60577674 - L2 LINE L2 -1 3271 3112 1775 152 14 17 chr17 24861160 24861450 -60577030 + AluJo SINE Alu 1 289 -23 413 216 23 0 chr17 24861482 24861570 -60576910 - MIR SINE MIR 0 262 173 201 161 274 0 chr17 24861801 24861863 -60576617 - MIR SINE MIR -13 249 171 210 265 0 0 chr17 24862194 24862243 -60576237 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 199 329 27 0 chr17 24862349 24862422 -60576058 - L2 LINE L2 -1023 2291 2217 363 301 114 16 chr17 24863526 24863719 -60574761 - MIR SINE MIR -3 259 48 616 270 122 5 chr17 24863891 24864080 -60574400 + MIR SINE MIR 29 239 -23 381 75 0 0 chr17 24864098 24864151 -60574329 + (CAT)n Simple_repeat Simple_repeat 2 54 0 622 264 42 56 chr17 24864191 24864407 -60574073 - MIR SINE MIR -30 232 20 2124 109 10 3 chr17 24864518 24864811 -60573669 + AluSx SINE Alu 1 295 -17 2120 128 0 3 chr17 24867182 24867480 -60571000 + AluSc SINE Alu 1 297 -12 794 122 58 0 chr17 24870076 24870215 -60568265 - L1MB4 LINE L1 -6 6174 6028 230 355 16 16 chr17 24870225 24870349 -60568131 + L2 LINE L2 2698 2821 -493 207 356 20 0 chr17 24870437 24870538 -60567942 + L2 LINE L2 2949 3051 -221 563 240 43 33 chr17 24870694 24870868 -60567612 + MIR SINE MIR 2 175 -33 23 0 0 0 chr17 24870877 24870900 -60567580 + AT_rich Low_complexity Low_complexity 1 23 0 210 253 67 53 chr17 24870908 24870983 -60567497 + L2 LINE L2 3195 3270 -2 2051 108 24 20 chr17 24871252 24871549 -60566931 - AluSx SINE Alu -14 298 1 429 268 31 0 chr17 24871647 24871744 -60566736 - L2 LINE L2 0 3313 3214 390 254 53 0 chr17 24872063 24872177 -60566303 + MER94 DNA DNA 15 134 0 32 26 0 0 chr17 24872569 24872608 -60565872 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr17 24873552 24873572 -60564908 + (T)n Simple_repeat Simple_repeat 1 20 0 2011 125 7 13 chr17 24873618 24873921 -60564559 + AluSq SINE Alu 1 301 -12 1760 132 27 108 chr17 24874868 24875238 -60563242 + MER77 LTR ERV1 1 340 -265 627 115 0 0 chr17 24875213 24875300 -60563180 + MER77 LTR ERV1 519 605 0 * 415 212 62 2 chr17 24875697 24875837 -60562643 - MER77 LTR ERV1 -424 181 1 1225 188 0 0 chr17 24875888 24876090 -60562390 + MER2 DNA MER2_type 1 202 -143 1834 129 0 29 chr17 24876129 24876408 -60562072 - AluJb SINE Alu -37 275 5 33 25 0 0 chr17 24876415 24876455 -60562025 + AT_rich Low_complexity Low_complexity 1 40 0 916 271 36 0 chr17 24877124 24877371 -60561109 + MIR SINE MIR 6 261 -1 359 183 42 0 chr17 24877552 24877623 -60560857 + MIR SINE MIR 116 189 -73 331 301 150 31 chr17 24878242 24878435 -60560045 - L2 LINE L2 0 3313 3098 252 0 0 0 chr17 24878908 24878936 -60559544 + (T)n Simple_repeat Simple_repeat 1 28 0 456 230 204 43 chr17 24878943 24879339 -60559141 - L1MC5 LINE L1 -50 7911 7452 22 35 0 0 chr17 24879387 24879416 -60559064 + AT_rich Low_complexity Low_complexity 1 29 0 2642 249 61 14 chr17 24880956 24881061 -60557419 - L1ME3 LINE L1 -30 6132 6033 2197 100 0 3 chr17 24881061 24881350 -60557130 - AluSg SINE Alu -22 288 1 2642 249 61 14 chr17 24881350 24882012 -60556468 - L1ME3 LINE L1 -129 6033 5329 1551 229 41 81 chr17 24882188 24882916 -60555564 - L1ME3 LINE L1 -932 5214 4516 284 302 22 50 chr17 24884157 24884296 -60554184 + MER5A DNA MER1_type 44 178 -11 501 298 116 10 chr17 24884487 24884685 -60553795 + MIR SINE MIR 18 236 -26 337 316 71 51 chr17 24885021 24885217 -60553263 - MIR SINE MIR -44 218 19 1903 156 10 0 chr17 24885453 24885755 -60552725 - AluJb SINE Alu -7 305 1 1490 195 24 24 chr17 24885988 24886280 -60552200 - AluJo SINE Alu -20 292 1 252 125 75 0 chr17 24887426 24887466 -60551014 - MER5B DNA MER1_type -134 44 2 654 246 129 11 chr17 24888416 24888696 -60549784 + LTR50 LTR ERVL 483 795 0 2292 101 13 0 chr17 24888724 24889032 -60549448 + AluSx SINE Alu 1 312 0 506 291 70 67 chr17 24889174 24889306 -60549174 - L3 LINE CR1 -758 819 689 715 191 0 22 chr17 24889306 24889442 -60549038 + FLAM_C SINE Alu 1 133 0 506 291 70 67 chr17 24889442 24889594 -60548886 - L3 LINE CR1 -888 689 534 237 234 47 16 chr17 24889720 24889784 -60548696 - L3 LINE CR1 -1260 317 252 758 137 81 0 chr17 24889902 24890026 -60548454 - FRAM SINE Alu -23 153 20 770 134 0 8 chr17 24890114 24890233 -60548247 + FLAM_C SINE Alu 1 118 -15 429 20 0 0 chr17 24890237 24890287 -60548193 + (CA)n Simple_repeat Simple_repeat 2 51 0 1919 179 139 16 chr17 24890471 24890917 -60547563 - L1MC4 LINE L1 -386 7656 7156 29 0 0 0 chr17 24894355 24894384 -60544096 + AT_rich Low_complexity Low_complexity 1 29 0 435 253 84 40 chr17 24894410 24894640 -60543840 + L1MC5 LINE L1 7694 8042 0 444 248 208 41 chr17 24894644 24895063 -60543417 + L1ME3 LINE L1 4358 4846 -1300 1629 178 196 6 chr17 24895116 24895712 -60542768 + LTR50 LTR ERVL 1 795 0 859 302 39 13 chr17 24895715 24896099 -60542381 + L1ME3 LINE L1 4899 5292 -854 1533 239 31 37 chr17 24896104 24896593 -60541887 + L1ME3 LINE L1 5477 5962 -208 3757 88 132 0 chr17 24896696 24897243 -60541237 + MER41B LTR ERV1 1 619 -16 243 304 54 0 chr17 24897243 24897355 -60541125 + L1ME3 LINE L1 6011 6128 -34 758 11 11 0 chr17 24898513 24898604 -60539876 + (CA)n Simple_repeat Simple_repeat 2 93 0 1146 222 59 77 chr17 24898728 24898994 -60539486 + L1ME2 LINE L1 875 1144 -5502 1893 113 53 8 chr17 24898994 24899286 -60539194 + AluSx SINE Alu 4 307 0 1146 222 59 77 chr17 24899286 24899373 -60539107 + L1ME2 LINE L1 1144 1231 -5415 2305 19 0 0 chr17 24899373 24899633 -60538847 + AluYa5 SINE Alu 52 311 0 1146 222 59 77 chr17 24899633 24900238 -60538242 + L1ME2 LINE L1 1231 1938 -4708 1011 211 26 4 chr17 24900240 24900505 -60537975 + L1ME2 LINE L1 4832 5102 -1542 * 1906 241 99 7 chr17 24900502 24901087 -60537393 + L1ME2 LINE L1 6015 6653 -9 2390 72 0 10 chr17 24901274 24901579 -60536901 - AluY SINE Alu -9 302 1 1906 140 36 0 chr17 24902257 24902536 -60535944 - AluSx SINE Alu -21 291 3 187 243 40 68 chr17 24902628 24902702 -60535778 + L2 LINE L2 3197 3268 -45 268 230 52 91 chr17 24902732 24902930 -60535550 - L1M4 LINE L1 -2256 3890 3700 2464 75 3 3 chr17 24903030 24903338 -60535142 - AluSq SINE Alu -5 308 1 2259 91 7 3 chr17 24905936 24906233 -60532247 + AluSg SINE Alu 1 298 -12 28 0 0 0 chr17 24907365 24907393 -60531087 + AT_rich Low_complexity Low_complexity 1 28 0 195 369 121 27 chr17 24907543 24907692 -60530788 - L2 LINE L2 0 3272 3110 2265 104 0 3 chr17 24907824 24908121 -60530359 - AluSc SINE Alu -13 296 1 1058 244 52 35 chr17 24908236 24908668 -60529812 + L1ME1 LINE L1 2560 2956 -3688 1532 199 42 127 chr17 24908710 24910612 -60527868 + L1ME1 LINE L1 4654 6326 -338 2868 7 0 0 chr17 24910612 24910921 -60527559 + AluYb8 SINE Alu 1 309 -9 1532 199 42 127 chr17 24910921 24911232 -60527248 + L1ME1 LINE L1 6326 6662 -2 514 251 52 58 chr17 24911337 24911508 -60526972 + L1ME LINE L1 5528 5698 -423 2361 91 3 0 chr17 24911508 24911817 -60526663 + AluSp SINE Alu 1 310 -3 514 251 52 58 chr17 24911817 24911936 -60526544 + L1ME LINE L1 5698 5816 -305 225 216 0 0 chr17 24912585 24912622 -60525858 + MIR SINE MIR 113 149 -59 336 268 0 52 chr17 24916925 24917022 -60521458 - MIR SINE MIR -109 153 62 202 329 14 27 chr17 24917050 24917123 -60521357 - MIR3 SINE MIR -133 75 4 21 0 0 0 chr17 24917215 24917236 -60521244 + AT_rich Low_complexity Low_complexity 1 21 0 2047 103 14 0 chr17 24917607 24917952 -60520528 + AluSc SINE Alu 1 349 0 219 170 0 0 chr17 24919191 24919238 -60519242 + (TA)n Simple_repeat Simple_repeat 2 48 0 300 234 45 45 chr17 24919477 24919588 -60518892 - L1ME3A LINE L1 -222 5948 5838 234 226 36 36 chr17 24919624 24919708 -60518772 - L1ME3A LINE L1 -310 5860 5777 * 666 283 50 14 chr17 24919695 24919978 -60518502 + L1ME1 LINE L1 1335 1627 -4769 565 110 31 118 chr17 24919990 24920117 -60518363 - FLAM_C SINE Alu -20 123 8 1551 202 81 53 chr17 24920123 24920617 -60517863 + L1ME1 LINE L1 1615 2122 -4274 2567 224 70 32 chr17 24920633 24921592 -60516888 + L1ME1 LINE L1 5197 6196 -39 1818 183 118 103 chr17 24921786 24922698 -60515782 + L1MC5 LINE L1 6558 7498 -463 196 339 16 0 chr17 24922858 24922920 -60515560 - MIR3 SINE MIR -2 206 144 749 149 50 0 chr17 24923624 24923745 -60514735 - FLAM_C SINE Alu -6 127 1 32 0 0 0 chr17 24923852 24923884 -60514596 + AT_rich Low_complexity Low_complexity 1 32 0 466 316 38 38 chr17 24924013 24924250 -60514230 + MLT1J LTR MaLR 4 240 -271 1374 176 13 93 chr17 24924445 24924737 -60513743 - MER7A DNA MER2_type -2695 343 88 2147 120 0 3 chr17 24924737 24925038 -60513442 - AluSx SINE Alu -12 300 1 1374 176 13 93 chr17 24925038 24925120 -60513360 - MER7A DNA MER2_type -2950 88 1 2369 91 0 0 chr17 24925634 24925931 -60512549 + AluSg SINE Alu 1 297 -13 238 289 12 48 chr17 24926023 24926106 -60512374 + MIR SINE MIR 30 109 -99 508 313 69 13 chr17 24926181 24926414 -60512066 - MIR SINE MIR -9 253 8 1641 162 0 7 chr17 24927085 24927356 -60511124 + AluSg SINE Alu 41 309 -1 1599 195 3 7 chr17 24927463 24927760 -60510720 + AluJb SINE Alu 13 308 -4 1139 111 0 12 chr17 24927764 24927936 -60510544 + L1PA11 LINE L1 6005 6174 0 2380 104 0 0 chr17 24927944 24928251 -60510229 + AluSg SINE Alu 3 309 -1 295 216 27 14 chr17 24928268 24928342 -60510138 - MLT1J LTR MaLR -315 196 122 990 218 50 38 chr17 24928556 24928817 -60509663 + MLT1J LTR MaLR 2 265 -246 1299 126 48 0 chr17 24928842 24929073 -60509407 - L1MA9 LINE L1 -1 6311 6070 244 258 34 45 chr17 24929164 24929253 -60509227 + LTR16C LTR ERVL 156 243 -248 933 143 0 0 chr17 24929770 24929903 -60508577 + AluJ SINE Alu 1 133 -179 939 193 12 0 chr17 24929944 24930115 -60508365 + AluJ SINE Alu 120 292 -20 364 200 0 0 chr17 24930180 24930240 -60508240 - AluJb SINE Alu -123 179 120 883 20 0 0 chr17 24930272 24930374 -60508106 - L1PA6 LINE L1 -11 6143 6042 21769 118 16 21 chr17 24930374 24933844 -60504636 - L1P LINE L1 -2682 3464 11 2052 117 7 3 chr17 24933855 24934146 -60504334 - AluSq SINE Alu -19 294 3 723 213 7 0 chr17 24934155 24934291 -60504189 - FLAM_C SINE Alu -6 137 1 676 267 128 31 chr17 24934294 24934683 -60503797 + HAL1b LINE L1 415 841 -507 328 240 27 0 chr17 24934942 24935017 -60503463 + L1MC5 LINE L1 6633 6709 -1252 300 100 0 0 chr17 24935041 24935091 -60503389 - L1MA9 LINE L1 0 6312 6263 2003 132 7 3 chr17 24935092 24935381 -60503099 + AluSx SINE Alu 1 290 -22 229 202 0 43 chr17 24935406 24935500 -60502980 + (TTAA)n Simple_repeat Simple_repeat 4 93 0 1995 131 23 71 chr17 24935501 24935935 -60502545 - L1MA9 LINE L1 -86 6226 5814 546 262 62 24 chr17 24935952 24936162 -60502318 + L1MC4a LINE L1 6723 6940 -868 1073 180 111 66 chr17 24936163 24936452 -60502028 + AluJo SINE Alu 1 302 0 1985 159 0 7 chr17 24936462 24936764 -60501716 + AluSx SINE Alu 1 300 -12 763 215 66 29 chr17 24936810 24937052 -60501428 + L1MC5 LINE L1 7268 7518 -443 280 242 0 0 chr17 24937073 24937135 -60501345 + GA-rich Low_complexity Low_complexity 2 63 0 2299 112 0 0 chr17 24937158 24937453 -60501027 + AluSx SINE Alu 1 295 -17 338 214 103 60 chr17 24937586 24937703 -60500777 + L1ME3A LINE L1 5988 6109 -61 304 243 14 0 chr17 24937795 24937869 -60500611 + MLT1J LTR MaLR 122 196 -315 276 213 163 38 chr17 24938116 24938196 -60500284 - L2 LINE L2 -1 3312 3223 1911 131 0 31 chr17 24939208 24939528 -60498952 + AluSx SINE Alu 1 311 0 981 156 85 75 chr17 24940000 24940212 -60498268 + AluJb SINE Alu 87 300 -12 1818 169 0 0 chr17 24940221 24940511 -60497969 + AluJb SINE Alu 1 290 -22 1288 188 33 0 chr17 24941028 24941241 -60497239 - AluJo SINE Alu -92 220 1 4018 162 83 7 chr17 24941352 24942514 -60495966 + L1MB2 LINE L1 4910 6145 -26 276 222 16 0 chr17 24942701 24942764 -60495716 - MIR SINE MIR -27 235 172 394 174 73 28 chr17 24942955 24943064 -60495416 + L1MC2 LINE L1 6226 6339 -5 2442 104 8 6 chr17 24943882 24944236 -60494244 + THE1A LTR MaLR 1 355 0 258 105 0 0 chr17 24944311 24944349 -60494131 + (A)n Simple_repeat Simple_repeat 1 38 0 2006 153 0 9 chr17 24944856 24945197 -60493283 + MLT1A1 LTR MaLR 1 338 -27 374 178 230 0 chr17 24946315 24946450 -60492030 - MER104 DNA Tc2 0 180 15 24 0 0 0 chr17 24946986 24947010 -60491470 + AT_rich Low_complexity Low_complexity 1 24 0 679 71 81 0 chr17 24947061 24947160 -60491320 - L1PA11 LINE L1 -2 6172 6066 183 244 24 0 chr17 24947470 24947511 -60490969 - L2 LINE L2 -8 3264 3223 254 280 136 77 chr17 24947860 24948339 -60490141 + L1ME1 LINE L1 58 564 -5555 501 274 150 70 chr17 24948359 24948805 -60489675 + L1ME1 LINE L1 610 1091 -5028 1429 169 0 8 chr17 24948857 24949094 -60489386 + AluJb SINE Alu 76 310 -2 284 291 68 0 chr17 24949102 24949250 -60489230 + L1ME1 LINE L1 2116 2273 -3856 232 281 54 35 chr17 24949334 24949378 -60489102 + L1ME2 LINE L1 71 113 -6310 201 94 0 0 chr17 24949378 24949410 -60489070 + (TTGG)n Simple_repeat Simple_repeat 1 32 0 232 281 54 35 chr17 24949410 24949568 -60488912 + L1ME2 LINE L1 113 277 -6146 1115 233 36 96 chr17 24949770 24950215 -60488265 + L1ME2 LINE L1 5134 5533 -1408 1162 164 42 19 chr17 24950215 24950428 -60488052 + MER20 DNA MER1_type 2 219 0 1115 233 36 96 chr17 24950428 24950600 -60487880 + L1ME2 LINE L1 5533 5714 -1227 33 66 0 0 chr17 24950640 24950701 -60487779 + AT_rich Low_complexity Low_complexity 1 61 0 2380 81 7 0 chr17 24950759 24951055 -60487425 + AluSc SINE Alu 1 298 -11 673 89 0 0 chr17 24951209 24951299 -60487181 + AluSc SINE Alu 209 298 -11 2666 206 68 36 chr17 24951321 24951403 -60487077 + L1ME2 LINE L1 5801 5879 -1080 2139 138 0 0 chr17 24951403 24951701 -60486779 - AluSx SINE Alu -14 298 1 2666 206 68 36 chr17 24951701 24952654 -60485826 + L1ME2 LINE L1 5879 6868 -91 1914 172 7 0 chr17 24952677 24952973 -60485507 + AluJo SINE Alu 1 298 -14 234 282 55 0 chr17 24953009 24953119 -60485361 + L1ME1 LINE L1 2627 2742 -3387 434 140 75 0 chr17 24953233 24953326 -60485154 + HY1 scRNA scRNA 7 106 -6 228 167 21 0 chr17 24953338 24953386 -60485094 + L1ME1 LINE L1 2841 2889 -3240 * 479 183 17 17 chr17 24953380 24953495 -60484985 + L1ME1 LINE L1 4807 4921 -1208 2295 104 0 0 chr17 24953495 24953794 -60484686 - AluSx SINE Alu -11 301 3 180 0 0 0 chr17 24953797 24953817 -60484663 + (TA)n Simple_repeat Simple_repeat 2 21 0 580 175 26 0 chr17 24953837 24953951 -60484529 + Ricksha DNA DNA 3 119 -1927 1655 127 55 33 chr17 24953977 24954338 -60484142 + Ricksha DNA DNA 2348 2716 -530 2048 213 70 19 chr17 24954352 24955209 -60483271 + L1ME1 LINE L1 4927 5824 -325 260 314 184 54 chr17 24955216 24955846 -60482634 - L2 LINE L2 -1370 1944 1233 194 182 0 0 chr17 24955861 24955894 -60482586 - MER5C DNA MER1_type -200 124 92 501 322 128 13 chr17 24955969 24956390 -60482090 + L2 LINE L2 2582 3055 -217 811 310 43 0 chr17 24956712 24956944 -60481536 - MIR SINE MIR -3 259 18 748 197 0 0 chr17 24956958 24957080 -60481400 + FLAM_A SINE Alu 1 122 -11 1080 209 17 51 chr17 24957207 24957442 -60481038 + AluJo SINE Alu 3 229 -83 225 0 0 0 chr17 24957455 24957480 -60481000 + (A)n Simple_repeat Simple_repeat 1 25 0 290 289 62 10 chr17 24957524 24957621 -60480859 - L3 LINE CR1 -835 742 641 1802 171 23 3 chr17 24958424 24958723 -60479757 + AluJo SINE Alu 2 306 -6 2145 120 7 0 chr17 24958774 24959066 -60479414 + AluSx SINE Alu 1 294 -18 1012 103 0 27 chr17 24959718 24959902 -60478578 + (TA)n Simple_repeat Simple_repeat 2 180 0 697 113 57 0 chr17 24960509 24960615 -60477865 + FRAM SINE Alu 37 148 -28 254 294 11 0 chr17 24960669 24960761 -60477719 - L1ME LINE L1 -354 5767 5675 344 223 85 23 chr17 24960953 24961083 -60477397 - L1ME LINE L1 -770 5408 5271 870 147 0 29 chr17 24961083 24961219 -60477261 + AluJb SINE Alu 1 132 -180 1680 205 69 5 chr17 24961552 24961957 -60476523 - MER63B DNA MER1_type -5 431 1 26 0 0 0 chr17 24962402 24962428 -60476052 + AT_rich Low_complexity Low_complexity 1 26 0 1970 157 0 0 chr17 24962512 24962811 -60475669 - AluJb SINE Alu -13 299 1 716 191 22 77 chr17 24962867 24963050 -60475430 - FAM SINE Alu -2 173 1 2573 65 0 0 chr17 24964400 24964707 -60473773 + AluSp SINE Alu 1 307 -6 555 290 0 0 chr17 24965245 24965369 -60473111 + MIR3 SINE MIR 62 185 -23 508 260 72 28 chr17 24965433 24965683 -60472797 + L1ME4a LINE L1 5853 6113 -8 235 188 29 43 chr17 24965941 24966010 -60472470 - MIR SINE MIR -21 241 174 1168 189 9 44 chr17 24966010 24966238 -60472242 + AluJo SINE Alu 1 220 -92 2336 102 0 0 chr17 24966266 24966569 -60471911 + AluSc SINE Alu 3 305 -4 444 262 63 24 chr17 24966569 24966695 -60471785 - MIR SINE MIR -79 183 53 727 210 114 30 chr17 24966704 24966871 -60471609 - AluJo SINE Alu -131 181 1 1004 145 0 7 chr17 24968579 24968731 -60469749 + AluJo SINE Alu 1 151 -161 1256 176 55 3 chr17 24968792 24969081 -60469399 + MER33 DNA MER1_type 21 324 0 28 0 0 0 chr17 24969379 24969407 -60469073 + AT_rich Low_complexity Low_complexity 1 28 0 469 265 20 0 chr17 24969848 24969950 -60468530 - MIR SINE MIR -66 142 39 2319 78 3 0 chr17 24969998 24970291 -60468189 + AluSc SINE Alu 1 294 -15 279 0 0 0 chr17 24970346 24970377 -60468103 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 24970395 24970416 -60468064 + AT_rich Low_complexity Low_complexity 1 21 0 1566 142 116 25 chr17 24970557 24970832 -60467648 - AluJb SINE Alu -12 300 1 577 215 49 0 chr17 24971101 24971245 -60467235 - MER106B DNA MER1_type -7 1052 902 249 309 204 73 chr17 24971338 24971652 -60466828 + L2 LINE L2 2918 3272 0 2054 122 11 0 chr17 24971668 24971954 -60466526 - AluSq SINE Alu -24 289 1 186 315 72 27 chr17 24972066 24972177 -60466303 + L2 LINE L2 3149 3264 -8 840 188 74 0 chr17 24974447 24974623 -60463857 - MIR SINE MIR 0 262 74 777 120 60 0 chr17 24976152 24976285 -60462195 + MLT1B LTR MaLR 204 344 -46 304 265 39 20 chr17 24976330 24976432 -60462048 - L2 LINE L2 -40 3273 3170 28 0 0 0 chr17 24976639 24976667 -60461813 + AT_rich Low_complexity Low_complexity 1 28 0 212 175 0 0 chr17 24978368 24978408 -60460072 + (CTG)n Simple_repeat Simple_repeat 1 40 0 204 40 0 0 chr17 24978513 24978538 -60459942 + (TGG)n Simple_repeat Simple_repeat 2 26 0 189 214 0 0 chr17 24978808 24978850 -60459630 + A-rich Low_complexity Low_complexity 1 42 0 245 323 0 0 chr17 24979726 24979825 -60458655 + C-rich Low_complexity Low_complexity 5 103 0 * 288 253 0 0 chr17 24979754 24979841 -60458639 + (CCG)n Simple_repeat Simple_repeat 1 87 0 241 279 0 0 chr17 24980157 24980218 -60458262 + T-rich Low_complexity Low_complexity 1 61 0 1731 167 16 23 chr17 24980877 24981183 -60457297 - AluJo SINE Alu -8 304 1 197 331 118 43 chr17 24981337 24981413 -60457067 + L2 LINE L2 2444 2513 -801 1528 120 18 5 chr17 24981413 24981630 -60456850 - AluJb SINE Alu -7 305 86 197 331 118 43 chr17 24981630 24981807 -60456673 + L2 LINE L2 2513 2716 -598 1482 173 65 0 chr17 24981807 24982084 -60456396 + AluJb SINE Alu 1 295 -17 363 323 158 34 chr17 24982097 24982518 -60455962 + L2 LINE L2 2794 3272 0 507 261 93 19 chr17 24982525 24982686 -60455794 + MIR SINE MIR 49 221 -41 547 246 43 22 chr17 24982784 24982922 -60455558 + MER5A DNA MER1_type 47 187 -2 189 310 90 40 chr17 24982929 24983029 -60455451 + L2 LINE L2 3209 3313 0 246 250 18 0 chr17 24983068 24983124 -60455356 - L2 LINE L2 0 3272 3216 2469 71 0 0 chr17 24983191 24983488 -60454992 - AluY SINE Alu -14 297 1 2060 73 0 8 chr17 24983854 24984115 -60454365 - AluY SINE Alu -52 259 1 2256 93 0 0 chr17 24984124 24984413 -60454067 - AluSg SINE Alu -21 289 1 2199 98 0 3 chr17 24984455 24984741 -60453739 - AluSx SINE Alu -1 311 27 707 98 0 0 chr17 24984842 24984934 -60453546 + AluSg/x SINE Alu 185 276 -36 261 0 0 0 chr17 24984937 24984966 -60453514 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 843 178 48 0 chr17 24985125 24985271 -60453209 - FRAM SINE Alu -12 154 2 306 293 14 57 chr17 24985458 24985598 -60452882 + MIR SINE MIR 13 146 -116 640 135 0 57 chr17 24986181 24986322 -60452158 - SVA Other Other -791 595 463 1672 168 23 30 chr17 24986322 24986625 -60451855 - AluJo SINE Alu -11 301 1 337 200 17 7 chr17 24986568 24986645 -60451835 - AluJ/FLAM SINE Alu -245 57 1 1402 83 11 0 chr17 24986793 24986974 -60451506 - AluSp SINE Alu -120 193 11 254 229 14 29 chr17 24986985 24987055 -60451425 + Tigger2 DNA MER2_type 12 80 -2638 * 1977 142 39 18 chr17 24987049 24987380 -60451100 + Tigger2 DNA MER2_type 225 562 -2156 183 156 0 0 chr17 24987380 24987412 -60451068 + CT-rich Low_complexity Low_complexity 1 32 0 1978 138 7 0 chr17 24987412 24987717 -60450763 - AluSx SINE Alu -5 307 1 282 138 0 0 chr17 24987763 24987821 -60450659 + (T)n Simple_repeat Simple_repeat 1 58 0 289 295 98 54 chr17 24988820 24989156 -60449324 - L1MC5 LINE L1 -60 7901 7551 1237 125 0 0 chr17 24989210 24989386 -60449094 - AluSg/x SINE Alu -11 301 126 1845 146 6 19 chr17 24989386 24989702 -60448778 - AluSx SINE Alu 0 312 1 259 330 30 10 chr17 24989818 24989918 -60448562 + Tigger8 DNA MER2_type 522 623 -43 254 155 121 0 chr17 24990741 24990799 -60447681 - AluSp/q SINE Alu -8 295 231 1715 133 0 4 chr17 24990827 24991076 -60447404 - AluSx SINE Alu -64 248 1 1932 161 0 0 chr17 24991574 24991884 -60446596 + AluSx SINE Alu 1 310 -2 249 326 11 0 chr17 24991894 24991983 -60446497 - L3 LINE CR1 -352 1225 1136 342 61 0 0 chr17 24992304 24992353 -60446127 + (T)n Simple_repeat Simple_repeat 1 49 0 1646 144 3 67 chr17 24992568 24992748 -60445732 - AluJo SINE Alu -10 302 149 2019 134 3 3 chr17 24992748 24993047 -60445433 - AluSc SINE Alu -10 299 1 1646 144 3 67 chr17 24993047 24993179 -60445301 - AluJo SINE Alu -163 149 10 2158 116 6 0 chr17 24993254 24993565 -60444915 - AluSq SINE Alu 0 313 1 363 340 70 0 chr17 24993565 24993750 -60444730 - LTR67 LTR ERVL -5 552 355 536 120 32 80 chr17 24993811 24993847 -60444633 - MLT2B1 LTR ERVL 0 520 484 216 0 0 0 chr17 24993847 24993871 -60444609 + (CA)n Simple_repeat Simple_repeat 2 25 0 536 120 32 80 chr17 24993871 24993959 -60444521 - MLT2B1 LTR ERVL -36 484 402 1430 107 44 35 chr17 24993959 24994276 -60444204 + SVA Other Other 467 786 -600 282 233 39 19 chr17 24994376 24994479 -60444001 + (CATA)n Simple_repeat Simple_repeat 1 105 0 515 238 16 24 chr17 24994667 24994793 -60443687 + MIR SINE MIR 20 144 -118 2041 120 0 10 chr17 24994945 24995246 -60443234 - AluSx SINE Alu -12 300 3 508 289 29 15 chr17 24995651 24995881 -60442599 + MIR SINE MIR 18 253 -9 527 239 51 14 chr17 24995909 24996047 -60442433 + MIR3 SINE MIR 43 185 -23 317 324 110 0 chr17 24996820 24997009 -60441471 - MIR SINE MIR -21 241 33 1127 147 20 10 chr17 24997939 24998205 -60440275 + L1M4 LINE L1 5176 5443 -737 353 137 0 0 chr17 24998205 24998256 -60440224 - U6 snRNA snRNA -56 51 1 282 102 51 51 chr17 24998256 24998315 -60440165 + L1M4 LINE L1 5428 5486 -688 9743 30 3 156 chr17 24999200 25000834 -60437646 + SVA Other Other 1 1389 0 1815 150 7 29 chr17 25000845 25001151 -60437329 + AluSx SINE Alu 1 299 -13 344 254 92 23 chr17 25001193 25001323 -60437157 - L1ME LINE L1 -514 5607 5469 242 299 35 14 chr17 25001353 25001421 -60437059 - L1ME LINE L1 -743 5403 5338 2415 59 0 0 chr17 25001421 25001726 -60436754 - AluY SINE Alu -6 305 1 242 299 35 14 chr17 25001726 25001801 -60436679 - L1ME LINE L1 -808 5338 5257 1458 115 0 5 chr17 25002375 25002593 -60435887 - AluSq SINE Alu -11 302 86 1964 108 0 69 chr17 25002710 25003044 -60435436 - AluSx SINE Alu -1 311 1 267 295 172 25 chr17 25003342 25003464 -60435016 + L2 LINE L2 3116 3255 -17 2015 143 0 16 chr17 25003465 25003779 -60434701 - AluSx SINE Alu -3 309 1 1733 226 106 40 chr17 25003867 25004366 -60434114 - MER90 LTR ERV1 -7 568 37 472 167 51 0 chr17 25004366 25004444 -60434036 + MER81 DNA DNA 1 82 -32 467 164 0 0 chr17 25004544 25004617 -60433863 - L1M3 LINE L1 -500 5683 5611 743 174 0 29 chr17 25004617 25004755 -60433725 - FRAM SINE Alu -8 168 35 908 114 0 0 chr17 25004756 25004887 -60433593 - L1M3 LINE L1 -565 5606 5476 2067 104 0 49 chr17 25004917 25005245 -60433235 - AluSx SINE Alu 0 312 1 1945 148 0 3 chr17 25005266 25005577 -60432903 - AluSg SINE Alu 0 310 1 299 160 0 0 chr17 25005577 25005627 -60432853 - L1M3 LINE L1 -680 5491 5442 1529 180 221 25 chr17 25005669 25006108 -60432372 + LTR64 LTR ERVK 22 546 -12 1538 183 12 72 chr17 25006111 25006330 -60432150 - L1M3 LINE L1 -729 5449 5218 1852 129 3 7 chr17 25006330 25006617 -60431863 - AluSx SINE Alu -26 286 1 1538 183 12 72 chr17 25006617 25006729 -60431751 - L1M3 LINE L1 -960 5218 5101 1797 133 9 25 chr17 25006729 25007046 -60431434 - AluJb SINE Alu 0 312 1 1538 183 12 72 chr17 25007046 25007266 -60431214 - L1M3 LINE L1 -1077 5101 4945 911 211 36 10 chr17 25007266 25007460 -60431020 - MER63B DNA MER1_type -237 199 1 2157 112 0 3 chr17 25007673 25007977 -60430503 - AluSq SINE Alu -10 303 1 1033 270 26 45 chr17 25007982 25008067 -60430413 + L1MEc LINE L1 1476 1561 -4835 1142 162 0 0 chr17 25008067 25008240 -60430240 - FAM SINE Alu -2 173 1 1033 270 26 45 chr17 25008240 25008535 -60429945 + L1MEc LINE L1 1561 1849 -4547 1980 108 0 48 chr17 25009345 25009659 -60428821 + AluSx SINE Alu 1 299 -13 2392 74 0 0 chr17 25009868 25010178 -60428302 + AluY SINE Alu 1 310 -1 1846 163 7 0 chr17 25010190 25010496 -60427984 + AluJb SINE Alu 1 308 -4 416 119 0 0 chr17 25010812 25010879 -60427601 - Alu SINE Alu -6 306 240 542 139 59 0 chr17 25010989 25011090 -60427390 - MER82 DNA MER2_type -182 471 365 1615 153 42 39 chr17 25011090 25011397 -60427083 - AluJb SINE Alu -4 308 1 294 274 24 0 chr17 25011398 25011482 -60426998 + LTR67 LTR ERVL 460 545 -12 185 282 146 0 chr17 25011558 25011668 -60426812 + L2 LINE L2 1634 1759 -1555 412 185 85 114 chr17 25011727 25011938 -60426542 + L1MEd LINE L1 940 1144 -4975 316 283 81 67 chr17 25012475 25012660 -60425820 - L1MCa LINE L1 -4233 2193 2003 1954 120 7 0 chr17 25012660 25012943 -60425537 - AluSx SINE Alu -27 285 1 316 283 81 67 chr17 25012943 25012980 -60425500 - L1MCa LINE L1 -4423 2003 1968 3479 244 115 44 chr17 25013002 25013643 -60424837 + HAL1 LINE L1 126 720 -1787 2301 89 3 0 chr17 25013643 25013946 -60424534 - AluSp SINE Alu -9 304 1 3479 244 115 44 chr17 25013946 25014119 -60424361 + HAL1 LINE L1 720 879 -1628 815 137 0 23 chr17 25014119 25014250 -60424230 + FLAM_A SINE Alu 5 132 -1 3479 244 115 44 chr17 25014250 25014801 -60423679 + HAL1 LINE L1 879 1589 -918 1883 117 0 34 chr17 25014802 25015120 -60423360 - AluSq SINE Alu 0 313 1 494 196 70 19 chr17 25015228 25015386 -60423094 - HAL1 LINE L1 -317 2190 2025 373 97 0 5 chr17 25015488 25015549 -60422931 - Alu SINE Alu -257 44 1 262 322 98 87 chr17 25015592 25015971 -60422509 + L2 LINE L2 2859 3241 -31 464 283 50 6 chr17 25015976 25016135 -60422345 + MER117 DNA MER1_type 6 171 -26 275 233 123 0 chr17 25016542 25016615 -60421865 + MIR SINE MIR 63 144 -64 194 158 0 53 chr17 25016615 25016653 -60421827 + MIR SINE MIR 111 146 -62 366 327 94 69 chr17 25016999 25017403 -60421077 - L2 LINE L2 -3 3269 2856 373 195 13 89 chr17 25017466 25017568 -60420912 - L1MEc LINE L1 -3965 2250 2219 736 191 0 0 chr17 25017568 25017694 -60420786 - FLAM_C SINE Alu -7 126 1 373 195 13 89 chr17 25017694 25017795 -60420685 - L1MEc LINE L1 -3996 2219 2112 2000 133 0 0 chr17 25017884 25018177 -60420303 + AluSx SINE Alu 1 293 -19 186 167 0 0 chr17 25018258 25018294 -60420186 + (TA)n Simple_repeat Simple_repeat 2 37 0 24 32 0 0 chr17 25018357 25018388 -60420092 + AT_rich Low_complexity Low_complexity 1 31 0 625 235 132 58 chr17 25019009 25019235 -60419245 - MIR SINE MIR 0 262 15 849 217 63 100 chr17 25019235 25019585 -60418895 + MER102b DNA MER1_type 4 340 -1 625 235 132 58 chr17 25019585 25019601 -60418879 - MIR SINE MIR -247 15 2 2211 104 0 7 chr17 25019905 25020214 -60418266 - AluSx SINE Alu 0 312 6 2329 90 0 3 chr17 25021136 25021446 -60417034 - AluSg SINE Alu -1 309 1 577 131 131 0 chr17 25022020 25022127 -60416353 + AluSq/x SINE Alu 11 131 -182 21 0 0 0 chr17 25022555 25022576 -60415904 + AT_rich Low_complexity Low_complexity 1 21 0 1844 158 3 0 chr17 25022582 25022874 -60415606 + AluJb SINE Alu 1 293 -19 1429 235 118 22 chr17 25022977 25023526 -60414954 + L1MEc LINE L1 1885 2486 -3910 794 188 0 0 chr17 25023526 25023654 -60414826 + FLAM_C SINE Alu 2 129 -14 22 43 0 21 chr17 25023654 25023680 -60414800 + AT_rich Low_complexity Low_complexity 1 27 -19 583 137 128 20 chr17 25023680 25023782 -60414698 - FLAM_C SINE Alu -17 116 4 22 43 0 21 chr17 25023782 25023802 -60414678 + AT_rich Low_complexity Low_complexity 27 46 0 425 242 16 8 chr17 25023805 25023929 -60414551 + L1MEc LINE L1 2431 2555 -3660 1768 117 0 4 chr17 25023931 25024180 -60414300 + AluSx SINE Alu 1 248 -64 1159 210 19 0 chr17 25024222 25024479 -60414001 + L1MEc LINE L1 2547 2808 -3407 365 250 52 0 chr17 25024521 25024637 -60413843 + L1MEc LINE L1 3038 3159 -3056 1147 277 42 69 chr17 25024669 25025174 -60413306 + ERVL LTR ERVL 4917 5407 -357 24 0 0 0 chr17 25025205 25025229 -60413251 + AT_rich Low_complexity Low_complexity 1 24 0 286 246 103 16 chr17 25025358 25025484 -60412996 + ERVL LTR ERVL 5604 5740 -24 8246 153 19 11 chr17 25025684 25027189 -60411291 - L1PA14 LINE L1 -2 6159 4632 2325 87 0 7 chr17 25027189 25027498 -60410982 - AluSp SINE Alu -6 307 1 8246 153 19 11 chr17 25027498 25028244 -60410236 - L1PA14 LINE L1 -1529 4632 3893 271 292 0 0 chr17 25028260 25028308 -60410172 + MLT2B3 LTR ERVL 169 219 -301 191 59 0 29 chr17 25028308 25028342 -60410138 + (CAAAA)n Simple_repeat Simple_repeat 4 36 0 271 292 0 0 chr17 25028342 25028358 -60410122 + MLT2B3 LTR ERVL 218 233 -287 * 4694 166 28 51 chr17 25028344 25028695 -60409785 - MER21B LTR ERV1 -19 844 486 183 80 0 0 chr17 25028695 25028720 -60409760 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4694 166 28 51 chr17 25028720 25028765 -60409715 - MER21B LTR ERV1 -377 486 441 1598 177 0 3 chr17 25028765 25029048 -60409432 + AluJb SINE Alu 1 282 -30 182 61 0 30 chr17 25029048 25029081 -60409399 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 4694 166 28 51 chr17 25029081 25029546 -60408934 - MER21B LTR ERV1 -420 443 1 786 227 10 63 chr17 25029563 25029770 -60408710 + MLT2B3 LTR ERVL 225 420 -134 1041 191 0 6 chr17 25029772 25029950 -60408530 - MER4E LTR ERV1 -1 778 602 2121 108 20 0 chr17 25029958 25030263 -60408217 + AluSx SINE Alu 1 311 -1 1183 166 0 20 chr17 25030265 25030464 -60408016 - MER4E LTR ERV1 -584 195 1 299 156 0 0 chr17 25030464 25030509 -60407971 + MLT2B2 LTR ERVL 368 412 -103 6703 56 6 45 chr17 25030517 25031510 -60406970 - SVA Other Other 0 1386 433 910 90 20 30 chr17 25031523 25031724 -60406756 - SVA Other Other -592 794 596 198 0 0 0 chr17 25031841 25031863 -60406617 + (A)n Simple_repeat Simple_repeat 1 22 0 1803 140 13 36 chr17 25032503 25032637 -60405843 + AluSx SINE Alu 2 138 -174 2150 105 13 0 chr17 25032637 25032941 -60405539 + AluSx SINE Alu 1 308 -4 1803 140 13 36 chr17 25032941 25033114 -60405366 + AluSx SINE Alu 138 302 -10 2220 75 3 28 chr17 25033116 25033459 -60405021 + AluY SINE Alu 1 311 0 374 220 84 44 chr17 25034097 25034359 -60404121 + L1ME3A LINE L1 5667 5951 -219 23 33 0 0 chr17 25034553 25034583 -60403897 + AT_rich Low_complexity Low_complexity 1 30 0 2290 82 0 0 chr17 25034583 25034875 -60403605 - AluSx SINE Alu -20 292 1 1302 154 58 8 chr17 25034901 25035141 -60403339 - AluJb SINE Alu -60 252 1 1936 107 46 0 chr17 25035167 25035447 -60403033 + AluSg SINE Alu 1 293 -17 197 171 0 0 chr17 25035778 25035813 -60402667 + MIR SINE MIR 91 125 -83 1003 171 0 102 chr17 25036427 25036574 -60401906 + AluJb SINE Alu 1 115 -197 2278 90 0 3 chr17 25036574 25036875 -60401605 + AluSq SINE Alu 2 301 -12 1003 171 0 102 chr17 25036875 25036972 -60401508 + AluJb SINE Alu 115 220 -92 443 177 49 21 chr17 25036972 25037136 -60401344 + AluJ SINE Alu 86 302 -10 216 239 83 55 chr17 25037163 25037224 -60401256 + MIR SINE MIR 145 214 -48 2141 99 0 7 chr17 25037224 25037531 -60400949 + AluY SINE Alu 1 303 -8 216 239 83 55 chr17 25037531 25037576 -60400904 + MIR SINE MIR 214 256 -6 815 143 0 0 chr17 25038673 25038792 -60399688 + AluJb SINE Alu 14 132 -180 1670 67 5 0 chr17 25038795 25039004 -60399476 + AluSp SINE Alu 60 269 -44 2358 87 0 3 chr17 25039107 25039417 -60399063 - AluSq SINE Alu -4 309 1 493 306 34 0 chr17 25039567 25039714 -60398766 + MIR SINE MIR 4 155 -107 1154 278 100 32 chr17 25039719 25039828 -60398652 - L2 LINE L2 -1 3312 3212 2255 99 16 0 chr17 25039828 25040132 -60398348 + AluSq SINE Alu 1 309 -4 1154 278 100 32 chr17 25040132 25040568 -60397912 - L2 LINE L2 -101 3212 2735 831 279 67 39 chr17 25040573 25041111 -60397369 - L1MC5 LINE L1 -262 7699 7260 875 175 0 0 chr17 25041184 25041338 -60397142 - AluJo/FRAM SINE Alu -6 306 153 1968 144 3 0 chr17 25041339 25041638 -60396842 + AluSx SINE Alu 1 300 -12 2092 110 0 3 chr17 25041645 25041936 -60396544 + AluSx SINE Alu 5 294 -18 2185 89 0 10 chr17 25041939 25042232 -60396248 + AluSg SINE Alu 1 290 -20 1078 103 29 29 chr17 25042235 25042409 -60396071 + AluSg/x SINE Alu 135 308 -2 2099 112 0 0 chr17 25042562 25042849 -60395631 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 25042849 25042880 -60395600 + AT_rich Low_complexity Low_complexity 1 31 0 959 177 25 20 chr17 25042936 25043000 -60395480 - MER3 DNA MER1_type 0 209 147 2002 74 70 0 chr17 25043000 25043270 -60395210 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 25043270 25043298 -60395182 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 959 177 25 20 chr17 25043298 25043311 -60395169 - MER3 DNA MER1_type -62 147 136 2293 81 0 3 chr17 25043311 25043607 -60394873 + AluSx SINE Alu 1 295 -17 959 177 25 20 chr17 25043607 25043730 -60394750 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 25045256 25045277 -60393203 + GC_rich Low_complexity Low_complexity 1 21 0 2280 81 7 0 chr17 25045800 25046097 -60392383 - AluSp SINE Alu -14 299 1 2097 101 0 3 chr17 25046350 25046638 -60391842 + AluSx SINE Alu 1 287 -25 3750 156 35 16 chr17 25047511 25048192 -60390288 + L1MB2 LINE L1 5478 6171 0 255 373 100 31 chr17 25048568 25049013 -60389467 - L2 LINE L2 0 3272 2793 2125 82 0 7 chr17 25049078 25049391 -60389089 + AluSc SINE Alu 1 311 0 242 287 129 30 chr17 25050552 25050653 -60387827 + MIR3 SINE MIR 11 121 -87 207 0 0 0 chr17 25050725 25050748 -60387732 + (T)n Simple_repeat Simple_repeat 1 23 0 292 304 54 16 chr17 25051452 25051636 -60386844 + L2 LINE L2 2902 3092 -180 317 295 201 0 chr17 25051655 25051804 -60386676 + MIR SINE MIR 82 260 -2 190 333 70 0 chr17 25051834 25051891 -60386589 + L2 LINE L2 3241 3301 -12 437 62 15 0 chr17 25051894 25051959 -60386521 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 223 289 156 11 chr17 25053578 25053668 -60384812 - MIR SINE MIR -76 186 84 532 264 35 7 chr17 25053668 25053812 -60384668 - MER69A DNA AcHobo -3 174 27 237 212 58 0 chr17 25054236 25054321 -60384159 - MIR SINE MIR -76 132 41 1021 275 193 41 chr17 25054449 25055311 -60383169 + L2 LINE L2 1584 2576 -738 890 110 7 29 chr17 25055355 25055491 -60382989 + FLAM_C SINE Alu 1 133 0 611 277 167 16 chr17 25055495 25055942 -60382538 + L2 LINE L2 2736 3301 -12 2131 115 0 10 chr17 25055943 25056247 -60382233 + AluSx SINE Alu 1 301 -11 2508 52 0 3 chr17 25056255 25056561 -60381919 - AluY SINE Alu -6 305 1 473 264 30 100 chr17 25056730 25056836 -60381644 - MIR SINE MIR 0 262 179 2412 73 0 0 chr17 25056836 25057136 -60381344 + AluSx SINE Alu 1 300 -12 473 264 30 100 chr17 25057136 25057260 -60381220 - MIR SINE MIR -83 179 48 351 358 85 20 chr17 25057413 25057706 -60380774 - L2 LINE L2 -70 3202 2891 340 281 116 39 chr17 25057976 25058024 -60380456 - L2 LINE L2 -234 3079 3036 1632 139 19 4 chr17 25058024 25058283 -60380197 + AluJo SINE Alu 29 291 -21 340 281 116 39 chr17 25058283 25058539 -60379941 - L2 LINE L2 -277 3036 2759 1326 190 10 68 chr17 25058798 25058933 -60379547 + AluJb SINE Alu 1 142 -170 2198 99 3 0 chr17 25058933 25059227 -60379253 + AluSx SINE Alu 1 295 -17 1326 190 10 68 chr17 25059227 25059401 -60379079 + AluJb SINE Alu 142 292 -20 246 276 82 20 chr17 25059557 25059749 -60378731 + MIR SINE MIR 1 248 -14 1121 194 92 46 chr17 25060451 25060821 -60377659 - MER89 LTR ERV1 -72 487 1 561 198 9 0 chr17 25060881 25060987 -60377493 - FLAM_A SINE Alu -3 139 33 1727 145 11 11 chr17 25061065 25061246 -60377234 - AluSx SINE Alu 0 311 128 291 28 0 0 chr17 25061246 25061282 -60377198 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1727 145 11 11 chr17 25061282 25061411 -60377069 - AluSx SINE Alu -182 129 1 655 135 57 35 chr17 25061414 25061555 -60376925 + Charlie4 DNA MER1_type 1817 1960 -1 234 274 8 97 chr17 25061633 25061757 -60376723 + L2 LINE L2 2694 2806 -508 1873 136 0 30 chr17 25062405 25062706 -60375774 + AluJo SINE Alu 1 292 -20 341 293 40 0 chr17 25062730 25062829 -60375651 - MIR SINE MIR -58 204 102 283 83 133 17 chr17 25062874 25062934 -60375546 - MIR SINE MIR -148 114 48 684 317 99 32 chr17 25063112 25063866 -60374614 - L2 LINE L2 -3 3310 2500 751 244 97 74 chr17 25064733 25064764 -60373716 - Charlie4a DNA MER1_type -1515 446 417 1561 161 9 64 chr17 25064764 25065093 -60373387 + AluJo SINE Alu 1 311 -1 751 244 97 74 chr17 25065093 25065495 -60372985 - Charlie4a DNA MER1_type -1544 417 3 1871 144 0 13 chr17 25065851 25066157 -60372323 - AluJb SINE Alu -10 302 1 184 313 109 34 chr17 25066158 25066305 -60372175 - MIR SINE MIR -103 159 2 333 290 71 44 chr17 25066395 25066578 -60371902 + MIR SINE MIR 59 246 -16 296 168 70 16 chr17 25066918 25067005 -60371475 + MER91B DNA MER1_type 8 104 -36 265 291 179 34 chr17 25067031 25067210 -60371270 + MIR SINE MIR 45 249 -13 213 205 72 48 chr17 25067673 25067756 -60370724 + MER91C DNA MER1_type 31 115 -25 1076 156 56 0 chr17 25068708 25068887 -60369593 - MER5A DNA MER1_type 0 189 1 2035 122 0 0 chr17 25069052 25069340 -60369140 + AluJb SINE Alu 1 288 -24 21 0 0 0 chr17 25069341 25069362 -60369118 + AT_rich Low_complexity Low_complexity 1 21 0 300 233 0 0 chr17 25070130 25070190 -60368290 - MER81 DNA DNA -54 60 1 209 229 171 7 chr17 25071078 25071190 -60367290 - MIR SINE MIR -99 163 30 518 331 97 30 chr17 25071254 25071695 -60366785 - L2 LINE L2 -15 3257 2790 379 322 26 7 chr17 25071705 25071857 -60366623 + MER117 DNA MER1_type 1 155 -42 215 337 41 41 chr17 25072044 25072142 -60366338 - L2 LINE L2 -46 3226 3129 192 278 56 56 chr17 25073235 25073343 -60365137 - MIR SINE MIR -59 149 42 221 259 17 0 chr17 25076518 25076576 -60361904 + (TG)n Simple_repeat Simple_repeat 1 59 0 191 266 127 0 chr17 25078755 25078834 -60359646 + L2 LINE L2 3187 3275 -38 213 247 96 0 chr17 25078948 25079021 -60359459 + MIR3 SINE MIR 81 160 -48 330 310 6 6 chr17 25079620 25079791 -60358689 + (CA)n Simple_repeat Simple_repeat 2 172 0 792 287 65 7 chr17 25081305 25081811 -60356669 - L1P LINE L1 -722 5429 4903 1270 132 35 40 chr17 25081883 25082110 -60356370 + AluJo SINE Alu 74 299 -13 580 294 48 91 chr17 25082165 25082475 -60356005 - L1M4 LINE L1 -1300 4846 4524 668 165 47 24 chr17 25082475 25082602 -60355878 - FLAM_C SINE Alu -3 130 1 580 294 48 91 chr17 25082602 25082816 -60355664 - L1M4 LINE L1 -1622 4524 4363 1809 141 22 22 chr17 25082816 25083128 -60355352 - AluJb SINE Alu 0 312 1 580 294 48 91 chr17 25083128 25083368 -60355112 - L1M4 LINE L1 -1783 4363 4114 611 233 75 0 chr17 25083727 25083886 -60354594 - MIR SINE MIR -14 248 78 339 358 0 39 chr17 25088251 25088506 -60349974 + C-rich Low_complexity Low_complexity 1 245 0 525 204 0 0 chr17 25089331 25089478 -60349002 + (CA)n Simple_repeat Simple_repeat 2 148 0 468 51 0 0 chr17 25089619 25089678 -60348802 + (CA)n Simple_repeat Simple_repeat 2 60 0 210 320 0 40 chr17 25090153 25090228 -60348252 + MIR3 SINE MIR 116 187 -21 193 280 0 67 chr17 25090693 25090768 -60347712 - MIR SINE MIR -70 192 123 572 189 104 0 chr17 25091565 25091671 -60346809 + FLAM_A SINE Alu 4 120 -13 1524 140 0 0 chr17 25092134 25092362 -60346118 + AluSg/x SINE Alu 83 310 0 24 32 0 0 chr17 25092438 25092469 -60346011 + AT_rich Low_complexity Low_complexity 1 31 0 243 259 0 0 chr17 25092495 25092607 -60345873 + (TCCA)n Simple_repeat Simple_repeat 1 112 0 589 238 55 24 chr17 25094005 25094169 -60344311 + MIR SINE MIR 4 172 -90 291 292 0 11 chr17 25097335 25097424 -60341056 - MIR3 SINE MIR -43 165 78 342 236 264 0 chr17 25097852 25097962 -60340518 + MIR3 SINE MIR 27 165 -43 830 225 52 66 chr17 25097973 25098186 -60340294 + MER63A DNA MER1_type 1 210 0 1068 133 13 0 chr17 25098248 25098406 -60340074 + FRAM SINE Alu 1 160 -16 584 251 116 37 chr17 25099050 25099265 -60339215 - MIR SINE MIR 0 262 31 229 163 0 61 chr17 25099414 25099463 -60339017 + MIR SINE MIR 81 126 -82 741 285 24 40 chr17 25100082 25100331 -60338149 - MIR SINE MIR -11 251 7 218 294 29 0 chr17 25100810 25100878 -60337602 + MIR SINE MIR 81 150 -112 473 296 128 5 chr17 25101120 25101323 -60337157 + MIR SINE MIR 21 248 -14 2054 130 7 0 chr17 25101430 25101738 -60336742 + AluSx SINE Alu 1 310 -2 1238 119 0 0 chr17 25101739 25101916 -60336564 + AluSg/x SINE Alu 119 295 -15 558 310 150 0 chr17 25101945 25102171 -60336309 - MIR SINE MIR 0 262 3 341 306 28 28 chr17 25102187 25102331 -60336149 - MIR3 SINE MIR -6 202 59 453 76 0 0 chr17 25102830 25102896 -60335584 + (TC)n Simple_repeat Simple_repeat 1 66 0 325 245 132 19 chr17 25104575 25104681 -60333799 + MIR SINE MIR 79 196 -66 523 304 23 18 chr17 25105012 25105183 -60333297 - MIR SINE MIR -34 228 57 525 210 42 8 chr17 25105247 25105366 -60333114 + MIR3 SINE MIR 77 199 -9 253 244 13 14 chr17 25106106 25106196 -60332284 + MIR SINE MIR 42 131 -77 198 247 32 108 chr17 25108419 25108512 -60329968 + L3 LINE CR1 1487 1572 -5 345 269 19 9 chr17 25108974 25109082 -60329398 + MIR SINE MIR 33 141 -67 1219 90 6 0 chr17 25109093 25109260 -60329220 + L1PA7 LINE L1 5987 6154 0 194 267 160 0 chr17 25109317 25109392 -60329088 + MIR SINE MIR 170 256 -6 635 250 174 1 chr17 25109440 25109635 -60328845 - MIR SINE MIR 0 262 36 195 333 0 0 chr17 25110093 25110156 -60328324 - MIR SINE MIR -82 126 64 434 317 48 0 chr17 25111488 25111633 -60326847 + MIR3 SINE MIR 38 189 -19 2091 105 27 3 chr17 25114531 25114827 -60323653 + AluSx SINE Alu 1 303 -9 469 325 128 5 chr17 25115375 25115563 -60322917 - MIR SINE MIR -10 252 42 297 245 106 66 chr17 25115940 25116091 -60322389 - MIR3 SINE MIR -31 177 21 400 136 0 0 chr17 25117407 25117472 -60321008 + Tigger5 DNA MER2_type 14 78 -2245 383 155 14 0 chr17 25117472 25117543 -60320937 - Tigger5 DNA MER2_type -3 2320 2249 466 156 0 0 chr17 25117544 25117621 -60320859 + Tigger5 DNA MER2_type 2247 2323 0 2252 89 0 13 chr17 25118636 25118939 -60319541 + AluSx SINE Alu 1 299 -13 2136 128 0 0 chr17 25118952 25119248 -60319232 + AluSx SINE Alu 1 296 -16 306 0 0 0 chr17 25119809 25119843 -60318637 + (TG)n Simple_repeat Simple_repeat 1 34 0 297 0 0 0 chr17 25119842 25119875 -60318605 + (GA)n Simple_repeat Simple_repeat 1 33 0 * 1265 198 0 5 chr17 25120066 25120288 -60318192 - AluJo SINE Alu -91 221 1 784 197 39 30 chr17 25120363 25120596 -60317884 + Charlie4 DNA MER1_type 1 235 -1726 297 0 0 0 chr17 25120598 25121219 -60317261 + (TA)n Simple_repeat Simple_repeat 1 621 0 1839 149 34 40 chr17 25120628 25120896 -60317584 - MER7A DNA MER2_type -2693 345 77 1958 135 0 3 chr17 25120896 25121185 -60317295 + AluSx SINE Alu 1 288 -24 297 0 0 0 chr17 25121186 25121219 -60317261 + (TA)n Simple_repeat Simple_repeat 2 34 0 1839 149 34 40 chr17 25121219 25121297 -60317183 - MER7A DNA MER2_type -2960 78 1 1425 141 98 14 chr17 25121333 25121610 -60316870 + MER2 DNA MER2_type 29 328 -17 2158 100 0 0 chr17 25121651 25121970 -60316510 + AluSc SINE Alu 1 319 0 1660 143 33 18 chr17 25122079 25122351 -60316129 + AluJo SINE Alu 21 296 -16 2001 87 6 90 chr17 25122618 25122952 -60315528 + AluSx SINE Alu 1 306 -6 429 360 91 16 chr17 25123843 25124285 -60314195 + L2 LINE L2 2183 2657 -657 774 187 157 10 chr17 25124302 25124500 -60313980 + MIR SINE MIR 34 260 -2 492 169 0 0 chr17 25124665 25124736 -60313744 + AluJ/FLAM SINE Alu 14 84 -228 262 275 96 19 chr17 25124777 25124952 -60313528 + L2 LINE L2 2909 3099 -173 216 162 0 0 chr17 25127008 25127045 -60311435 + C-rich Low_complexity Low_complexity 4 40 0 184 330 38 47 chr17 25128069 25128175 -60310305 + MIR SINE MIR 36 140 -68 250 339 33 25 chr17 25129393 25129514 -60308966 - L3b LINE CR1 -168 1415 1294 190 296 0 0 chr17 25129951 25130005 -60308475 - L3b LINE CR1 -191 1392 1339 770 218 67 5 chr17 25130565 25130758 -60307722 - MIR SINE MIR -48 214 10 23 0 0 0 chr17 25131702 25131725 -60306755 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 25131732 25131753 -60306727 + GC_rich Low_complexity Low_complexity 1 21 0 434 287 189 10 chr17 25131963 25132259 -60306221 + L2 LINE L2 2953 3301 -12 632 298 77 10 chr17 25132470 25132694 -60305786 - MIR SINE MIR -6 256 18 333 0 0 0 chr17 25132703 25132740 -60305740 + (CA)n Simple_repeat Simple_repeat 2 38 0 549 241 36 24 chr17 25134514 25134680 -60303800 - MER117 DNA MER1_type -19 178 11 2240 88 0 3 chr17 25134752 25135047 -60303433 + AluSg1 SINE Alu 1 294 -15 200 205 0 0 chr17 25136075 25136114 -60302366 + MIR SINE MIR 46 84 -124 446 342 103 24 chr17 25136272 25136602 -60301878 + L2 LINE L2 2618 2973 -341 220 217 0 0 chr17 25136618 25136664 -60301816 + L2 LINE L2 3227 3272 0 1755 185 10 3 chr17 25137092 25137384 -60301096 + AluJo SINE Alu 4 297 -15 2224 90 10 0 chr17 25138050 25138338 -60300142 - AluSc SINE Alu -18 291 1 1001 108 7 0 chr17 25138417 25138556 -60299924 + AluSc SINE Alu 2 141 -168 1692 108 4 0 chr17 25138556 25138788 -60299692 + AluSc SINE Alu 72 304 -5 1928 143 13 36 chr17 25139426 25139560 -60298920 + AluSx SINE Alu 2 138 -174 2302 105 13 0 chr17 25139560 25139864 -60298616 + AluSx SINE Alu 1 308 -4 1928 143 13 36 chr17 25139864 25140037 -60298443 + AluSx SINE Alu 138 302 -10 2410 77 3 10 chr17 25140039 25140381 -60298099 + AluY SINE Alu 1 311 0 349 220 84 44 chr17 25141019 25141281 -60297199 + L1ME3A LINE L1 5667 5951 -219 23 33 0 0 chr17 25141475 25141505 -60296975 + AT_rich Low_complexity Low_complexity 1 30 0 2432 82 0 0 chr17 25141505 25141797 -60296683 - AluSx SINE Alu -20 292 1 1417 154 58 8 chr17 25141823 25142063 -60296417 - AluJb SINE Alu -60 252 1 2074 107 46 0 chr17 25142089 25142369 -60296111 + AluSg SINE Alu 1 293 -17 199 171 0 0 chr17 25142700 25142735 -60295745 + MIR SINE MIR 91 125 -83 1862 162 0 38 chr17 25143349 25143496 -60294984 + AluJb SINE Alu 1 131 -181 2438 87 0 3 chr17 25143496 25143796 -60294684 + AluSq SINE Alu 2 300 -13 1862 162 0 38 chr17 25143796 25143962 -60294518 + AluJb SINE Alu 131 302 -10 550 253 92 79 chr17 25143965 25144585 -60293895 + L1M4 LINE L1 4032 4659 -1487 1756 149 22 67 chr17 25144671 25144811 -60293669 + AluJo SINE Alu 1 146 -166 2082 127 0 3 chr17 25144811 25145136 -60293344 + AluSx SINE Alu 1 324 0 1756 149 22 67 chr17 25145136 25145309 -60293171 + AluJo SINE Alu 146 301 -11 2260 130 0 9 chr17 25145339 25145654 -60292826 - AluSx SINE Alu 0 312 1 2087 144 3 0 chr17 25145657 25145956 -60292524 - AluSx SINE Alu -12 300 1 934 175 0 0 chr17 25145957 25146111 -60292369 + AluJo/FRAM SINE Alu 153 306 -6 780 247 87 52 chr17 25146297 25146722 -60291758 + L1MC5 LINE L1 7260 7699 -262 1260 278 100 32 chr17 25146729 25147164 -60291316 + L2 LINE L2 2736 3212 -101 2386 96 13 0 chr17 25147164 25147466 -60291014 - AluSx SINE Alu -6 306 1 1260 278 100 32 chr17 25147466 25147575 -60290905 + L2 LINE L2 3212 3312 -1 529 306 34 0 chr17 25147580 25147727 -60290753 - MIR SINE MIR -107 155 4 2460 93 0 3 chr17 25147877 25148188 -60290292 + AluSq SINE Alu 1 310 -3 1981 129 32 29 chr17 25148257 25148566 -60289914 + AluJb SINE Alu 1 310 -2 881 252 117 4 chr17 25148738 25148968 -60289512 + MIR SINE MIR 3 258 -4 2364 100 0 0 chr17 25149292 25149603 -60288877 + AluSx SINE Alu 1 311 -1 704 250 82 26 chr17 25151184 25151416 -60287064 + MIR SINE MIR 17 261 -1 190 143 24 48 chr17 25158063 25158105 -60280375 + L3 LINE CR1 1299 1339 -238 204 67 0 0 chr17 25159379 25159409 -60279071 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 208 0 30 30 chr17 25159452 25159485 -60278995 + (GAAA)n Simple_repeat Simple_repeat 4 36 0 676 313 97 60 chr17 25159485 25160054 -60278426 + L2 LINE L2 1782 2371 -943 1221 216 0 0 chr17 25160131 25160349 -60278131 + MER58A DNA MER1_type 5 222 -2 202 307 50 95 chr17 25161434 25161675 -60276805 + L2 LINE L2 2929 3158 -114 1021 173 13 91 chr17 25162027 25162258 -60276222 - AluJb SINE Alu -15 297 85 207 176 0 0 chr17 25163681 25163715 -60274765 + (CA)n Simple_repeat Simple_repeat 2 35 0 2262 124 3 0 chr17 25165588 25165894 -60272586 - AluSx SINE Alu -5 307 1 685 129 10 0 chr17 25165985 25166086 -60272394 - AluJo SINE Alu -178 134 33 1958 145 0 38 chr17 25166195 25166328 -60272152 + AluJb SINE Alu 1 138 -174 2359 75 7 0 chr17 25166328 25166621 -60271859 + AluSp SINE Alu 1 295 -18 1958 145 0 38 chr17 25166621 25166804 -60271676 + AluJb SINE Alu 138 305 -7 349 267 231 15 chr17 25166804 25166999 -60271481 - L1ME LINE L1 -560 5561 5325 2015 152 10 0 chr17 25167748 25168045 -60270435 - AluSx SINE Alu -12 300 1 1528 196 66 67 chr17 25168101 25168166 -60270314 - Charlie2 DNA MER1_type -103 2759 2695 2427 88 0 0 chr17 25168166 25168462 -60270018 - AluSx SINE Alu -16 296 1 1528 196 66 67 chr17 25168462 25168691 -60269789 - Charlie2 DNA MER1_type -167 2695 2467 1715 196 0 7 chr17 25168691 25168992 -60269488 + AluJb SINE Alu 1 299 -13 1528 196 66 67 chr17 25168992 25169305 -60269175 - Charlie2 DNA MER1_type -395 2467 2150 1952 145 3 3 chr17 25169305 25169588 -60268892 - AluJo SINE Alu -24 288 6 1528 196 66 67 chr17 25169588 25169648 -60268832 - Charlie2 DNA MER1_type -712 2150 2091 2544 79 0 0 chr17 25169652 25169957 -60268523 + AluSg SINE Alu 1 305 -5 968 103 0 81 chr17 25169959 25170133 -60268347 + L1MA2 LINE L1 6145 6304 0 408 233 17 33 chr17 25170215 25170335 -60268145 - Charlie2 DNA MER1_type -2657 125 8 1371 195 96 11 chr17 25170356 25170628 -60267852 - AluJo SINE Alu -7 295 1 211 194 0 0 chr17 25170962 25170998 -60267482 + GA-rich Low_complexity Low_complexity 2 37 0 1623 148 116 25 chr17 25172531 25172815 -60265665 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr17 25172933 25172963 -60265517 + AT_rich Low_complexity Low_complexity 1 30 0 335 313 57 8 chr17 25173025 25173271 -60265209 + HAL1 LINE L1 1122 1379 -1128 22 0 0 0 chr17 25173349 25173371 -60265109 + AT_rich Low_complexity Low_complexity 1 22 0 2550 66 0 0 chr17 25173377 25173679 -60264801 + AluY SINE Alu 1 302 -9 1076 169 0 0 chr17 25173881 25174041 -60264439 + FRAM SINE Alu 5 164 -12 2263 118 0 0 chr17 25174045 25174349 -60264131 + AluSg SINE Alu 5 308 -2 2279 108 0 3 chr17 25174529 25174824 -60263656 + AluSx SINE Alu 1 294 -18 2313 89 0 10 chr17 25174827 25175120 -60263360 + AluSg SINE Alu 1 290 -20 1151 103 29 29 chr17 25175123 25175297 -60263183 + AluSg/x SINE Alu 135 308 -2 2218 112 0 0 chr17 25175449 25175736 -60262744 + AluSq SINE Alu 1 287 -26 24 32 0 0 chr17 25175736 25175767 -60262713 + AT_rich Low_complexity Low_complexity 1 31 0 956 177 25 20 chr17 25175823 25175887 -60262593 - MER3 DNA MER1_type 0 209 147 2119 74 70 0 chr17 25175887 25176157 -60262323 + AluSp SINE Alu 1 289 -24 212 0 36 0 chr17 25176157 25176185 -60262295 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 956 177 25 20 chr17 25176185 25176198 -60262282 - MER3 DNA MER1_type -62 147 136 2420 81 0 3 chr17 25176198 25176494 -60261986 + AluSx SINE Alu 1 295 -17 956 177 25 20 chr17 25176494 25176617 -60261863 - MER3 DNA MER1_type -73 136 6 21 0 0 0 chr17 25178143 25178164 -60260316 + GC_rich Low_complexity Low_complexity 1 21 0 667 264 35 25 chr17 25178633 25178830 -60259650 - MIR SINE MIR -2 260 62 1082 126 53 80 chr17 25179087 25179233 -60259247 + MER33 DNA MER1_type 2 150 -2435 1482 132 87 56 chr17 25179233 25179363 -60259117 + AluJo SINE Alu 2 126 -186 2412 71 3 3 chr17 25179363 25179659 -60258821 + AluSx SINE Alu 1 296 -16 1482 132 87 56 chr17 25179659 25179815 -60258665 + AluJo SINE Alu 126 297 -15 1082 126 53 80 chr17 25179815 25179904 -60258576 + MER33 DNA MER1_type 150 240 -2345 1922 152 28 0 chr17 25179904 25180187 -60258293 - AluJo SINE Alu -21 291 1 2189 128 3 6 chr17 25180196 25180508 -60257972 - AluSx SINE Alu -1 311 1 1082 126 53 80 chr17 25180508 25180562 -60257918 + MER33 DNA MER1_type 248 294 -30 1533 143 8 13 chr17 25180583 25180821 -60257659 - AluJb SINE Alu -75 237 1 21 0 0 0 chr17 25180821 25180842 -60257638 + AT_rich Low_complexity Low_complexity 1 21 0 228 68 0 114 chr17 25181110 25181154 -60257326 - AluSx SINE Alu -8 292 254 1213 145 0 12 chr17 25181154 25181326 -60257154 - AluSx SINE Alu -142 170 1 455 145 58 0 chr17 25181326 25181395 -60257085 - AluJ/FRAM SINE Alu -17 295 223 441 127 0 0 chr17 25181409 25181472 -60257008 - U4 snRNA snRNA -82 63 1 519 161 49 0 chr17 25181487 25181568 -60256912 - AluJ/FLAM SINE Alu -225 87 3 2135 127 10 0 chr17 25181661 25181953 -60256527 - AluSx SINE Alu -17 295 1 2068 89 34 14 chr17 25181961 25182253 -60256227 - AluSg SINE Alu -12 298 1 29 0 0 0 chr17 25182256 25182285 -60256195 + AT_rich Low_complexity Low_complexity 1 29 0 244 233 0 0 chr17 25182473 25182533 -60255947 + T-rich Low_complexity Low_complexity 1 60 0 6783 68 14 26 chr17 25182540 25184370 -60254110 - SVA Other Other -799 1382 5 243 0 0 0 chr17 25184398 25184425 -60254055 + (GGGAGA)n Simple_repeat Simple_repeat 5 31 0 644 156 0 0 chr17 25184449 25184558 -60253922 - AluSp/q SINE Alu -3 310 202 2058 105 11 11 chr17 25184597 25184874 -60253606 - AluSp SINE Alu -19 294 18 2411 75 0 3 chr17 25184877 25185171 -60253309 - AluSc SINE Alu -16 293 1 1457 185 47 37 chr17 25185174 25185472 -60253008 - AluJo SINE Alu -11 301 1 2214 103 0 73 chr17 25185868 25186197 -60252283 + AluSq SINE Alu 1 305 -8 738 200 8 0 chr17 25186205 25186335 -60252145 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr17 25186375 25186403 -60252077 + AT_rich Low_complexity Low_complexity 1 28 0 289 267 40 80 chr17 25186452 25186528 -60251952 - MIR SINE MIR -61 147 85 2337 105 0 0 chr17 25186528 25186832 -60251648 + AluSx SINE Alu 3 306 -6 289 267 40 80 chr17 25186832 25186905 -60251575 - MIR SINE MIR -123 85 11 1980 146 7 7 chr17 25187423 25187718 -60250762 - AluSx SINE Alu -16 296 2 1880 126 15 7 chr17 25188096 25188367 -60250113 - AluSx SINE Alu -2 310 38 682 102 0 10 chr17 25188731 25188829 -60249651 + AluSg/x SINE Alu 210 306 -3 2212 113 3 17 chr17 25188830 25189132 -60249348 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr17 25191244 25191265 -60247215 + AT_rich Low_complexity Low_complexity 1 21 0 215 79 26 0 chr17 25193771 25193809 -60244671 + (TA)n Simple_repeat Simple_repeat 2 40 0 189 219 0 24 chr17 25194429 25194470 -60244010 - L2 LINE L2 -84 3229 3190 1086 141 0 25 chr17 25196825 25196988 -60241492 - AluSg/x SINE Alu -14 298 140 2394 101 3 0 chr17 25196990 25197296 -60241184 - AluSx SINE Alu -5 307 1 1354 199 132 0 chr17 25197307 25197579 -60240901 - AluSx SINE Alu -4 308 1 23 0 0 0 chr17 25197585 25197608 -60240872 + AT_rich Low_complexity Low_complexity 1 23 0 889 94 0 65 chr17 25198407 25198545 -60239935 + FLAM_C SINE Alu 2 130 -3 2464 75 3 0 chr17 25201858 25202165 -60236315 + AluSg SINE Alu 1 308 -2 298 311 101 20 chr17 25202248 25202429 -60236051 - MIR3 SINE MIR -54 208 3 313 267 280 33 chr17 25203968 25204118 -60234362 + MIR SINE MIR 4 190 -72 2520 94 0 0 chr17 25204119 25204472 -60234008 + AluSc SINE Alu 1 353 0 426 306 95 70 chr17 25204481 25204830 -60233650 + L2 LINE L2 2215 2554 -718 2280 101 10 0 chr17 25204830 25205126 -60233354 - AluSq SINE Alu -14 299 1 426 306 95 70 chr17 25205126 25205432 -60233048 + L2 LINE L2 2554 2896 -376 5129 141 45 20 chr17 25205432 25206274 -60232206 + MER21B LTR ERV1 1 863 0 426 306 95 70 chr17 25206274 25206436 -60232044 + L2 LINE L2 2896 3053 -219 2332 73 28 3 chr17 25206474 25206762 -60231718 - AluY SINE Alu -16 295 1 1542 126 0 27 chr17 25206798 25207020 -60231460 - AluSq SINE Alu -93 220 5 2154 122 0 3 chr17 25207716 25208012 -60230468 + AluSg SINE Alu 1 295 -15 717 186 34 0 chr17 25208148 25208266 -60230214 - FLAM_A SINE Alu -15 127 6 289 141 0 94 chr17 25208273 25208363 -60230117 - AluJb SINE Alu 0 302 236 2020 125 3 24 chr17 25208363 25208520 -60229960 - AluSg SINE Alu -21 289 130 275 0 29 0 chr17 25208520 25208555 -60229925 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2113 122 3 3 chr17 25208555 25208842 -60229638 - AluSq SINE Alu -26 287 1 2020 125 3 24 chr17 25208842 25208978 -60229502 - AluSg SINE Alu -178 132 1 1616 158 0 8 chr17 25208980 25209221 -60229259 - AluJb SINE Alu -67 245 7 1960 150 0 7 chr17 25209229 25209522 -60228958 - AluJb SINE Alu -21 291 1 2149 132 0 19 chr17 25209529 25209847 -60228633 - AluSx SINE Alu 0 312 1 1586 189 43 53 chr17 25210120 25210496 -60227984 + MLT1A2 LTR MaLR 3 374 0 1951 183 34 8 chr17 25211484 25211840 -60226640 + MLT1A1 LTR MaLR 1 365 0 189 0 0 0 chr17 25211903 25211924 -60226556 + (TCCCC)n Simple_repeat Simple_repeat 1 21 0 188 381 114 38 chr17 25214897 25215002 -60223478 + L2 LINE L2 3141 3253 -19 541 179 58 80 chr17 25215499 25215723 -60222757 + L1MC5 LINE L1 7691 7909 -52 818 149 7 64 chr17 25215820 25215961 -60222519 + FLAM_C SINE Alu 1 133 0 891 154 0 0 chr17 25216724 25216867 -60221613 - AluSg/x SINE Alu -1 311 169 286 266 13 0 chr17 25217911 25217990 -60220490 - MER116 DNA Mariner 0 80 1 224 311 151 25 chr17 25218117 25218236 -60220244 - L2 LINE L2 0 3272 3139 25 23 0 23 chr17 25219148 25219176 -60219304 + AT_rich Low_complexity Low_complexity 1 29 -13 2213 99 3 3 chr17 25219176 25219470 -60219010 + AluSg SINE Alu 1 294 -16 25 23 0 23 chr17 25219470 25219484 -60218996 + AT_rich Low_complexity Low_complexity 29 42 0 389 302 13 44 chr17 25219973 25220115 -60218365 + MIR SINE MIR 20 163 -45 861 211 0 17 chr17 25220118 25220298 -60218182 + MER8 DNA MER2_type 1 177 -62 271 193 105 0 chr17 25220276 25220333 -60218147 + MER2 DNA MER2_type 283 345 0 * 479 105 26 13 chr17 25220333 25220402 -60218078 - Tigger2 DNA MER2_type -2648 70 1 2260 103 0 26 chr17 25220423 25220734 -60217746 + AluSg SINE Alu 1 303 -7 2438 78 0 10 chr17 25221434 25221740 -60216740 + AluY SINE Alu 2 304 -7 204 67 0 0 chr17 25224011 25224041 -60214439 + (CCG)n Simple_repeat Simple_repeat 1 30 0 813 148 0 15 chr17 25224735 25224870 -60213610 - FLAM_A SINE Alu 0 133 1 2415 96 0 0 chr17 25226352 25226653 -60211827 + AluSx SINE Alu 1 301 -11 634 159 24 14 chr17 25226664 25226916 -60211564 + AluJ SINE Alu 1 303 -9 206 239 83 55 chr17 25226943 25227004 -60211476 + MIR SINE MIR 145 212 -50 2360 88 0 7 chr17 25227004 25227309 -60211171 + AluY SINE Alu 1 303 -8 206 239 83 55 chr17 25227309 25227356 -60211124 + MIR SINE MIR 212 256 -6 1576 174 51 14 chr17 25228453 25228575 -60209905 + AluJb SINE Alu 14 130 -182 2125 67 4 0 chr17 25228575 25228828 -60209652 + AluSp SINE Alu 60 313 0 1576 174 51 14 chr17 25228828 25228980 -60209500 + AluJb SINE Alu 130 298 -14 2387 71 3 0 chr17 25229005 25229315 -60209165 - AluSp SINE Alu 0 311 1 244 101 0 203 chr17 25229532 25229567 -60208913 - FAM SINE Alu -136 179 167 2395 88 0 52 chr17 25229567 25229895 -60208585 + AluSq SINE Alu 1 311 -2 244 101 0 203 chr17 25229895 25229938 -60208542 - FAM SINE Alu -148 167 117 834 255 53 0 chr17 25229939 25230127 -60208353 - AluJo SINE Alu -108 204 7 1810 157 31 7 chr17 25230141 25230427 -60208053 - AluSx SINE Alu -19 293 1 352 307 205 6 chr17 25230519 25230685 -60207795 + MIR SINE MIR 20 218 -44 198 0 0 0 chr17 25230843 25230865 -60207615 + (TG)n Simple_repeat Simple_repeat 2 23 0 6004 160 50 45 chr17 25230867 25231088 -60207392 + L1MC3 LINE L1 6342 6560 -1225 1078 168 12 0 chr17 25231088 25231261 -60207219 + FAM SINE Alu 1 175 0 6004 160 50 45 chr17 25231261 25231367 -60207113 + L1MC3 LINE L1 6560 6664 -1121 2276 112 3 0 chr17 25231367 25231671 -60206809 - AluSg SINE Alu -5 305 1 6004 160 50 45 chr17 25231671 25232594 -60205886 + L1MC3 LINE L1 6664 7603 -182 2144 94 7 17 chr17 25232594 25232918 -60205562 + AluSg SINE Alu 1 310 0 6004 160 50 45 chr17 25232918 25233020 -60205460 + L1MC3 LINE L1 7603 7703 -82 1622 153 76 11 chr17 25233092 25233367 -60205113 + AluJo SINE Alu 1 293 -19 2181 107 3 17 chr17 25233596 25233733 -60204747 + AluSx SINE Alu 1 138 -174 2204 125 0 19 chr17 25233733 25234044 -60204436 + AluSg SINE Alu 1 305 -5 2181 107 3 17 chr17 25234044 25234206 -60204274 + AluSx SINE Alu 138 296 -16 311 114 10 5 chr17 25235214 25235279 -60203201 + Alu SINE Alu 3 45 -263 264 163 41 0 chr17 25235284 25235333 -60203147 - Alu SINE Alu -257 51 1 25 0 0 0 chr17 25235342 25235367 -60203113 + AT_rich Low_complexity Low_complexity 1 25 0 2096 132 3 10 chr17 25235367 25235671 -60202809 + AluSx SINE Alu 1 302 -10 2340 109 0 0 chr17 25236015 25236318 -60202162 + AluSg SINE Alu 6 308 -2 724 169 17 0 chr17 25236330 25236448 -60202032 + FLAM_C SINE Alu 1 120 -13 2002 150 3 0 chr17 25236468 25236761 -60201719 - AluJb SINE Alu -18 294 1 27 29 0 0 chr17 25236761 25236795 -60201685 + AT_rich Low_complexity Low_complexity 1 34 0 1447 179 16 12 chr17 25236797 25237043 -60201437 + AluJb SINE Alu 1 247 -65 6241 54 5 331 chr17 25237316 25239339 -60199141 - SVA Other Other 0 1386 23 193 281 56 22 chr17 25239352 25239441 -60199039 + MER5B DNA MER1_type 85 176 -2 394 211 35 105 chr17 25239565 25239679 -60198801 - MER5A DNA MER1_type -3 186 81 242 316 0 13 chr17 25240034 25240110 -60198370 + L2 LINE L2 3194 3268 -4 180 0 0 0 chr17 25240151 25240171 -60198309 + (A)n Simple_repeat Simple_repeat 1 20 0 568 301 129 10 chr17 25240406 25240615 -60197865 + MIR SINE MIR 21 254 -8 801 136 0 0 chr17 25242896 25243021 -60195459 - FRAM SINE Alu -10 166 42 2007 299 75 30 chr17 25243052 25243293 -60195187 + L2 LINE L2 1865 2094 -1220 2012 106 11 0 chr17 25243293 25243576 -60194904 + AluSx SINE Alu 1 286 -26 2007 299 75 30 chr17 25243576 25244190 -60194290 + L2 LINE L2 2094 2758 -556 267 239 283 18 chr17 25244428 25244541 -60193939 + L2 LINE L2 3159 3301 -12 2032 102 0 24 chr17 25244544 25244839 -60193641 + AluSx SINE Alu 2 289 -23 201 39 0 0 chr17 25244840 25244866 -60193614 + (TATATG)n Simple_repeat Simple_repeat 6 31 0 774 169 0 0 chr17 25244866 25244990 -60193490 + FRAM SINE Alu 29 152 -24 199 224 20 20 chr17 25245013 25245062 -60193418 + L2 LINE L2 2709 2757 -557 814 97 79 0 chr17 25245766 25245880 -60192600 + AluSc SINE Alu 167 289 -20 2234 106 3 0 chr17 25245887 25246199 -60192281 + AluSq SINE Alu 1 313 0 394 343 34 23 chr17 25246630 25246805 -60191675 + MIR SINE MIR 15 191 -71 263 234 31 0 chr17 25247613 25247677 -60190803 - L2 LINE L2 -3 3269 3204 2387 56 7 3 chr17 25247694 25247997 -60190483 - AluSp SINE Alu -9 304 1 300 235 78 61 chr17 25248297 25248412 -60190068 - MIR SINE MIR -75 187 71 694 196 48 12 chr17 25248488 25248656 -60189824 + Charlie1b DNA MER1_type 114 287 -236 2038 108 0 3 chr17 25248661 25248948 -60189532 - AluSx SINE Alu -26 286 1 827 131 25 0 chr17 25248955 25249077 -60189403 - AluSq/x SINE Alu -185 127 3 819 166 61 22 chr17 25249081 25249121 -60189359 + Charlie1b DNA MER1_type 274 311 -2450 1584 120 94 11 chr17 25249121 25249411 -60189069 + AluSx SINE Alu 1 312 0 819 166 61 22 chr17 25249411 25249599 -60188881 + Charlie1b DNA MER1_type 311 511 -12 269 336 50 25 chr17 25250661 25250780 -60187700 - L2 LINE L2 -9 3263 3142 241 222 19 0 chr17 25251043 25251097 -60187383 + (TA)n Simple_repeat Simple_repeat 2 56 0 377 221 58 18 chr17 25251097 25251207 -60187273 - L1MCa LINE L1 -1339 6983 1995 325 294 24 0 chr17 25251132 25251217 -60187263 + L1MC3 LINE L1 6571 6657 -1128 * 322 264 88 57 chr17 25251824 25251983 -60186497 - L2 LINE L2 -1 3312 3149 1604 172 28 3 chr17 25254835 25255120 -60183360 + AluJo SINE Alu 3 294 -18 2018 114 0 39 chr17 25255135 25255279 -60183201 + AluSq SINE Alu 1 128 -185 1991 112 3 36 chr17 25255279 25255584 -60182896 + AluSx SINE Alu 1 295 -17 2018 114 0 39 chr17 25255584 25255746 -60182734 + AluSq SINE Alu 128 295 -18 2212 95 0 3 chr17 25257280 25257576 -60180904 + AluSx SINE Alu 3 297 -15 489 167 0 0 chr17 25257590 25257668 -60180812 + FRAM/FAM SINE Alu 1 77 -99 1738 129 3 32 chr17 25257795 25258106 -60180374 - AluSp SINE Alu -11 302 1 2219 102 0 3 chr17 25258274 25258577 -60179903 - AluSx SINE Alu -10 302 1 29 0 0 0 chr17 25258648 25258677 -60179803 + AT_rich Low_complexity Low_complexity 1 29 0 1185 161 0 22 chr17 25259614 25259837 -60178643 - AluJb SINE Alu -10 302 85 189 0 0 0 chr17 25259839 25259860 -60178620 + (T)n Simple_repeat Simple_repeat 1 21 0 1710 74 22 9 chr17 25259913 25260144 -60178336 - L1PA8 LINE L1 0 6172 5939 744 114 9 0 chr17 25260398 25260512 -60177968 - AluSg/x SINE Alu -5 307 193 2284 53 0 0 chr17 25260616 25260938 -60177542 - AluY SINE Alu 0 322 1 2050 154 15 28 chr17 25260938 25261328 -60177152 - L1 LINE L1 -2218 3928 3544 817 157 8 15 chr17 25261544 25261678 -60176802 + FLAM_C SINE Alu 1 133 0 31 0 0 0 chr17 25261678 25261709 -60176771 + AT_rich Low_complexity Low_complexity 1 31 0 452 249 46 52 chr17 25261726 25261899 -60176581 + AluSc SINE Alu 119 290 -19 993 166 5 27 chr17 25262324 25262341 -60176139 + AluJo SINE Alu 120 136 -176 2273 75 3 0 chr17 25262341 25262635 -60175845 + AluSg SINE Alu 1 295 -15 2398 63 0 3 chr17 25262635 25262937 -60175543 + AluY SINE Alu 1 301 -10 993 166 5 27 chr17 25262937 25263105 -60175375 + AluJo SINE Alu 134 302 -10 1869 166 0 3 chr17 25263108 25263415 -60175065 + AluSx SINE Alu 5 310 -2 1201 184 31 86 chr17 25263512 25263838 -60174642 - AluJo SINE Alu 0 312 5 21 0 0 0 chr17 25263929 25263950 -60174530 + AT_rich Low_complexity Low_complexity 1 21 0 1284 178 33 4 chr17 25264084 25264359 -60174121 + L1MA8 LINE L1 4195 4477 -1669 1929 138 0 10 chr17 25264363 25264668 -60173812 + AluSq SINE Alu 5 306 -7 970 162 67 0 chr17 25264668 25264892 -60173588 + L1MA8 LINE L1 5190 5426 -745 1034 174 0 15 chr17 25264893 25265088 -60173392 + AluJb SINE Alu 121 312 0 3513 136 62 14 chr17 25265094 25265734 -60172746 + L1MA8 LINE L1 5442 6112 -179 290 259 0 0 chr17 25265744 25265802 -60172678 + Tigger3(Golem) DNA MER2_type 22 79 -2950 1693 169 13 0 chr17 25265805 25266107 -60172373 + AluJo SINE Alu 1 306 -6 367 267 12 108 chr17 25266108 25266366 -60172114 + L1ME4a LINE L1 5645 5877 -244 329 188 0 0 chr17 25266483 25266531 -60171949 + AluSp SINE Alu 137 184 -119 268 266 0 0 chr17 25267401 25267465 -60171015 + MIR SINE MIR 161 224 -38 1902 126 27 7 chr17 25267640 25267941 -60170539 - AluSx SINE Alu -5 307 1 339 307 223 37 chr17 25267950 25268246 -60170234 + L3 LINE CR1 1225 1575 -2 217 225 101 80 chr17 25268281 25268419 -60170061 - MIR SINE MIR 0 262 122 1421 170 31 0 chr17 25268439 25268698 -60169782 + AluJo SINE Alu 14 280 -32 1388 195 34 7 chr17 25268754 25269046 -60169434 + AluJo SINE Alu 1 300 -12 182 310 58 11 chr17 25269048 25269135 -60169345 - L2 LINE L2 -190 3123 3033 2146 65 61 0 chr17 25269285 25269562 -60168918 - AluY SINE Alu -17 294 1 2331 83 0 0 chr17 25269618 25269918 -60168562 - AluSc SINE Alu -9 300 1 2229 68 0 39 chr17 25269943 25270254 -60168226 - AluY SINE Alu -12 299 1 1690 164 7 3 chr17 25270259 25270552 -60167928 - AluJo SINE Alu -17 295 2 2238 74 10 0 chr17 25270676 25270974 -60167506 - AluSp SINE Alu -12 301 1 467 320 50 17 chr17 25271267 25271448 -60167032 + L2 LINE L2 1807 1993 -1321 1022 167 4 94 chr17 25271449 25271683 -60166797 - AluJb SINE Alu -14 298 86 571 241 361 4 chr17 25271683 25271957 -60166523 + L2 LINE L2 1981 2352 -962 2222 69 3 13 chr17 25271963 25272267 -60166213 - AluY SINE Alu -10 301 1 914 35 0 17 chr17 25272268 25272383 -60166097 - AluSc SINE Alu -196 113 1 924 232 26 64 chr17 25272409 25272792 -60165688 + L2 LINE L2 2732 3102 -211 271 276 143 66 chr17 25272855 25273051 -60165429 + L2 LINE L2 3093 3303 -10 873 168 52 0 chr17 25273203 25273358 -60165122 - AluSg/x SINE Alu -17 295 133 2059 94 7 3 chr17 25273359 25273656 -60164824 - AluY SINE Alu -13 298 1 335 281 108 42 chr17 25273705 25273872 -60164608 + L1MC4 LINE L1 6613 6790 -1252 1961 120 0 3 chr17 25274187 25274479 -60164001 + AluSg SINE Alu 1 291 -19 2138 73 0 14 chr17 25274560 25274849 -60163631 + AluY SINE Alu 1 285 -26 23 0 0 0 chr17 25274852 25274875 -60163605 + AT_rich Low_complexity Low_complexity 1 23 0 1076 36 0 36 chr17 25275231 25275368 -60163112 + AluY SINE Alu 1 132 -179 2181 103 0 0 chr17 25275403 25275704 -60162776 + AluSg SINE Alu 1 301 -9 2102 106 10 19 chr17 25275982 25276294 -60162186 + AluSq SINE Alu 1 309 -4 2020 119 3 0 chr17 25276308 25276602 -60161878 + AluSx SINE Alu 4 298 -14 213 132 0 0 chr17 25276911 25276949 -60161531 + (T)n Simple_repeat Simple_repeat 1 38 0 673 99 0 11 chr17 25277517 25277608 -60160872 + AluSg/x SINE Alu 71 160 -152 536 167 0 0 chr17 25277710 25277788 -60160692 - AluJ/FLAM SINE Alu -233 79 2 381 281 39 21 chr17 25277792 25277946 -60160534 - MIR SINE MIR -63 145 33 213 65 0 0 chr17 25278246 25278277 -60160203 + (ATG)n Simple_repeat Simple_repeat 2 32 0 2129 87 7 7 chr17 25278281 25278435 -60160045 - AluSq SINE Alu -25 288 132 1866 101 40 34 chr17 25278435 25278732 -60159748 - AluSq SINE Alu -14 299 1 2129 87 7 7 chr17 25278732 25278865 -60159615 - AluSq SINE Alu -180 133 1 2266 55 3 64 chr17 25279629 25279957 -60158523 - AluY SINE Alu -3 308 1 2337 71 10 0 chr17 25280560 25280857 -60157623 - AluSp SINE Alu -13 300 1 1772 181 0 0 chr17 25280974 25281272 -60157208 - AluJo SINE Alu -14 298 1 1960 123 0 30 chr17 25281482 25281784 -60156696 - AluSx SINE Alu -19 293 1 216 0 0 0 chr17 25281813 25281837 -60156643 + (A)n Simple_repeat Simple_repeat 1 24 0 1839 127 14 10 chr17 25281934 25282226 -60156254 - AluSg1 SINE Alu -16 293 1 1894 239 75 102 chr17 25282362 25283569 -60154911 + L1MC4 LINE L1 6730 7903 -139 284 266 0 16 chr17 25283709 25283773 -60154707 - AluJb SINE Alu -61 241 179 * 344 175 63 0 chr17 25283751 25283814 -60154666 + AluJ/FRAM SINE Alu 232 298 -4 1671 151 33 10 chr17 25284139 25284443 -60154037 + AluSx SINE Alu 1 311 -1 186 306 0 0 chr17 25284931 25284980 -60153500 - L3 LINE CR1 -285 1292 1244 1593 149 38 14 chr17 25285043 25285332 -60153148 + AluJb SINE Alu 1 296 -16 2008 95 0 83 chr17 25286536 25286861 -60151619 - AluY SINE Alu -13 298 1 1627 146 33 7 chr17 25288161 25288483 -60149997 - AluJb SINE Alu 0 329 1 440 295 154 53 chr17 25288518 25288952 -60149528 + L3 LINE CR1 1081 1558 -19 2357 57 0 35 chr17 25289884 25290198 -60148282 + AluSg SINE Alu 1 303 -7 184 225 0 25 chr17 25290648 25290728 -60147752 + GA-rich Low_complexity Low_complexity 1 78 0 225 227 45 0 chr17 25291060 25291126 -60147354 + (CCCCAG)n Simple_repeat Simple_repeat 2 70 0 751 127 9 9 chr17 25291842 25291952 -60146528 + AluJb SINE Alu 106 215 -97 189 121 0 0 chr17 25293054 25293087 -60145393 + (A)n Simple_repeat Simple_repeat 1 33 0 1401 120 5 23 chr17 25293101 25293180 -60145300 - AluSx SINE Alu -100 212 133 2245 66 36 10 chr17 25293180 25293483 -60144997 - AluY SINE Alu 0 311 1 1401 120 5 23 chr17 25293483 25293619 -60144861 - AluSx SINE Alu -179 133 1 518 252 69 25 chr17 25295904 25296063 -60142417 + MIR SINE MIR 31 196 -66 210 216 0 59 chr17 25296166 25296217 -60142263 + MIR SINE MIR 215 262 0 21 36 0 0 chr17 25297384 25297412 -60141068 + GC_rich Low_complexity Low_complexity 1 28 0 1841 97 60 7 chr17 25298694 25298993 -60139487 - AluJb SINE Alu 0 313 1 205 232 71 0 chr17 25299008 25299064 -60139416 + MIR SINE MIR 67 126 -82 1173 62 56 0 chr17 25299301 25299462 -60139018 + AluY SINE Alu 142 311 0 2198 84 3 10 chr17 25300740 25301038 -60137442 + AluSp SINE Alu 1 296 -17 1553 186 7 20 chr17 25301578 25301884 -60136596 - AluJb SINE Alu -10 302 1 601 280 102 18 chr17 25301893 25302118 -60136362 - L2 LINE L2 -854 2460 2217 477 289 0 0 chr17 25302118 25302232 -60136248 - L2 LINE L2 -1 3312 3199 560 279 158 0 chr17 25302259 25302449 -60136031 - MIR SINE MIR -3 259 40 184 250 68 57 chr17 25303001 25303089 -60135391 + MIR SINE MIR 64 152 -56 2172 77 0 56 chr17 25303091 25303414 -60135066 + AluY SINE Alu 1 305 -6 211 305 49 0 chr17 25304215 25304297 -60134183 + L2 LINE L2 3104 3189 -83 7641 25 6 0 chr17 25304480 25305919 -60132561 - L1PA4 LINE L1 -1 6154 4709 420 296 41 18 chr17 25307046 25307215 -60131265 - MIR SINE MIR -8 254 82 300 219 16 0 chr17 25308022 25308086 -60130394 - L2 LINE L2 -1 3312 3248 2260 85 3 0 chr17 25308155 25308450 -60130030 - AluSg SINE Alu -14 296 1 298 332 82 69 chr17 25308465 25308712 -60129768 - L2 LINE L2 -20 3252 2999 2220 110 0 0 chr17 25308712 25309013 -60129467 + AluSg SINE Alu 6 306 -4 298 332 82 69 chr17 25309013 25309069 -60129411 - L2 LINE L2 -273 2999 2945 1680 58 0 5 chr17 25311016 25311223 -60127257 + AluY SINE Alu 1 206 -105 334 56 0 0 chr17 25311223 25311277 -60127203 + AluY SINE Alu 249 302 0 521 140 66 88 chr17 25311348 25311484 -60126996 + FLAM_C SINE Alu 1 133 0 2384 90 0 0 chr17 25311495 25311807 -60126673 + AluSx SINE Alu 1 312 0 31 0 0 0 chr17 25313034 25313065 -60125415 + GC_rich Low_complexity Low_complexity 1 31 0 393 287 49 21 chr17 25313398 25313541 -60124939 - MIR SINE MIR -70 192 46 295 224 0 0 chr17 25314320 25314378 -60124102 + AluSp SINE Alu 130 187 -116 21 138 0 0 chr17 25314563 25314592 -60123888 + AT_rich Low_complexity Low_complexity 1 29 0 267 383 74 12 chr17 25319842 25320004 -60118476 + MIR SINE MIR 89 260 -2 790 175 0 0 chr17 25320101 25320227 -60118253 + AluSg/x SINE Alu 166 291 -21 1958 93 34 28 chr17 25320234 25320525 -60117955 + AluSc SINE Alu 1 293 -16 1245 171 156 12 chr17 25320809 25320918 -60117562 + AluSx SINE Alu 1 93 -209 2108 109 0 7 chr17 25320918 25321221 -60117259 + AluSq SINE Alu 1 301 -12 1245 171 156 12 chr17 25321221 25321368 -60117112 + AluSx SINE Alu 93 294 -8 2020 125 14 0 chr17 25321740 25322028 -60116452 + AluSg SINE Alu 1 292 -18 1789 70 4 0 chr17 25322034 25322262 -60116218 + AluY SINE Alu 83 311 0 275 106 0 0 chr17 25322330 25322380 -60116100 + Alu SINE Alu 1 38 -263 198 103 0 0 chr17 25322380 25322409 -60116071 + (TTA)n Simple_repeat Simple_repeat 2 30 0 252 86 0 0 chr17 25322788 25322823 -60115657 + (A)n Simple_repeat Simple_repeat 1 35 0 2050 116 0 30 chr17 25322877 25323178 -60115302 - AluSx SINE Alu -20 292 1 2131 139 3 0 chr17 25323777 25324086 -60114394 - AluSx SINE Alu 0 312 3 1424 183 62 24 chr17 25324087 25324377 -60114103 - AluJo SINE Alu -11 301 1 2196 107 0 3 chr17 25324753 25325052 -60113428 + AluSx SINE Alu 1 298 -14 205 175 0 25 chr17 25329328 25329368 -60109112 + GA-rich Low_complexity Low_complexity 3 41 0 406 353 87 0 chr17 25329502 25329686 -60108794 - MIR SINE MIR -8 254 55 2252 95 0 19 chr17 25329741 25330056 -60108424 + AluSx SINE Alu 2 310 -2 2269 96 0 3 chr17 25331795 25332097 -60106383 + AluSg SINE Alu 2 302 -8 2254 71 3 14 chr17 25332107 25332403 -60106077 + AluSg1 SINE Alu 3 295 -14 352 303 103 18 chr17 25333127 25333292 -60105188 + MIR SINE MIR 84 262 0 1141 119 0 0 chr17 25333585 25333744 -60104736 + AluSg/x SINE Alu 147 305 -7 865 198 6 6 chr17 25333746 25333913 -60104567 + AluJo/FRAM SINE Alu 137 303 -9 2232 101 10 0 chr17 25333916 25334224 -60104256 + AluSp SINE Alu 1 311 -2 1114 188 52 0 chr17 25334713 25334926 -60103554 + MER58A DNA MER1_type 1 224 0 2109 115 7 13 chr17 25335624 25335929 -60102551 + AluSq SINE Alu 1 303 -10 2423 63 0 7 chr17 25336606 25336909 -60101571 - AluSq SINE Alu -12 301 1 1890 136 7 4 chr17 25336919 25337228 -60101252 - AluSx SINE Alu 0 310 1 1725 76 16 24 chr17 25338048 25338299 -60100181 + AluY SINE Alu 55 303 -8 1413 112 0 0 chr17 25338312 25338508 -60099972 - AluSc SINE Alu -113 196 1 456 195 229 8 chr17 25339048 25339166 -60099314 + FRAM SINE Alu 23 166 -10 239 117 39 39 chr17 25342298 25342375 -60096105 + C-rich Low_complexity Low_complexity 3 79 0 204 267 23 23 chr17 25343152 25343238 -60095242 + G-rich Low_complexity Low_complexity 4 89 0 2613 71 0 3 chr17 25343644 25343953 -60094527 - AluSx SINE Alu -4 308 1 444 284 117 19 chr17 25345119 25345383 -60093097 - L2 LINE L2 0 3313 3024 1105 130 0 0 chr17 25345401 25345555 -60092925 - AluSg/x SINE Alu -25 285 132 2204 87 6 37 chr17 25345556 25345878 -60092602 - AluSx SINE Alu 0 312 1 331 329 74 23 chr17 25345879 25346095 -60092385 - L2 LINE L2 -239 3033 2807 1183 126 11 0 chr17 25346136 25346310 -60092170 - AluY SINE Alu -3 308 133 2329 106 0 10 chr17 25346314 25346626 -60091854 - AluSq SINE Alu -4 309 1 1832 158 16 3 chr17 25346630 25346933 -60091547 - AluSq SINE Alu -6 307 1 24 0 0 0 chr17 25347040 25347064 -60091416 + AT_rich Low_complexity Low_complexity 1 24 0 991 252 42 16 chr17 25348045 25348430 -60090050 - L1ME4a LINE L1 -3 6118 5725 2152 135 3 0 chr17 25349608 25349912 -60088568 + AluSx SINE Alu 1 305 -7 2200 124 3 0 chr17 25350360 25350658 -60087822 + AluSx SINE Alu 1 299 -13 2509 70 0 0 chr17 25350684 25350984 -60087496 + AluY SINE Alu 1 300 -11 649 173 0 47 chr17 25351020 25351147 -60087333 + FLAM_A SINE Alu 3 123 -10 2579 44 7 3 chr17 25351157 25351452 -60087028 + AluY SINE Alu 1 296 -15 1180 123 0 0 chr17 25351466 25351620 -60086860 + AluSq SINE Alu 1 154 -159 1329 188 27 41 chr17 25351705 25351837 -60086643 + AluJb SINE Alu 5 137 -165 2553 71 0 0 chr17 25351837 25352134 -60086346 + AluY SINE Alu 3 299 -12 1329 188 27 41 chr17 25352134 25352293 -60086187 + AluJb SINE Alu 137 292 -10 2351 94 0 3 chr17 25352294 25352591 -60085889 + AluSx SINE Alu 1 296 -16 2167 106 10 14 chr17 25353833 25354125 -60084355 + AluSx SINE Alu 1 291 -21 478 205 33 86 chr17 25354315 25354466 -60084014 + MIR3 SINE MIR 60 202 -6 1552 141 27 57 chr17 25355007 25355140 -60083340 + AluJo SINE Alu 11 146 -166 1961 138 35 0 chr17 25355140 25355429 -60083051 + AluSx SINE Alu 1 299 -13 2079 117 38 0 chr17 25355430 25355720 -60082760 + AluSx SINE Alu 1 301 -11 1552 141 27 57 chr17 25355720 25355882 -60082598 + AluJo SINE Alu 145 299 -13 493 322 174 17 chr17 25357847 25358204 -60080276 + L3 LINE CR1 973 1385 -192 369 317 88 29 chr17 25358229 25358469 -60080011 - MIR SINE MIR -2 260 7 264 338 37 22 chr17 25358457 25358593 -60079887 + L3 LINE CR1 1434 1571 -6 * 424 305 86 5 chr17 25361493 25361680 -60076800 + MIR SINE MIR 40 241 -21 279 303 0 0 chr17 25362994 25363070 -60075410 + CT-rich Low_complexity Low_complexity 5 80 0 253 260 16 57 chr17 25364458 25364581 -60073899 + CT-rich Low_complexity Low_complexity 5 122 0 656 279 40 15 chr17 25365384 25365585 -60072895 + MIR SINE MIR 8 213 -49 249 307 89 0 chr17 25365929 25366030 -60072450 - L2 LINE L2 -3 3269 3160 255 157 0 0 chr17 25366032 25366083 -60072397 + G-rich Low_complexity Low_complexity 1 51 0 184 333 103 11 chr17 25367215 25367302 -60071178 + L2 LINE L2 1862 1956 -1358 466 66 0 0 chr17 25367307 25367404 -60071076 - Alu SINE Alu 0 315 219 341 299 17 34 chr17 25367537 25367714 -60070766 + GA-rich Low_complexity Low_complexity 2 175 0 * 372 328 0 53 chr17 25367644 25367833 -60070647 + A-rich Low_complexity Low_complexity 2 180 0 930 198 32 29 chr17 25367894 25368172 -60070308 + AluSx SINE Alu 33 311 -1 697 141 39 8 chr17 25368331 25368459 -60070021 - AluJo SINE Alu -176 136 5 2286 101 10 7 chr17 25368788 25369086 -60069394 - AluSx SINE Alu -13 299 1 2054 141 0 0 chr17 25370472 25370749 -60067731 + AluSx SINE Alu 1 277 -35 180 97 0 0 chr17 25370760 25370791 -60067689 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2416 110 0 0 chr17 25370843 25371153 -60067327 + AluSp SINE Alu 2 311 -2 489 218 45 45 chr17 25371544 25371677 -60066803 - FLAM_A SINE Alu 0 133 1 2236 88 3 36 chr17 25371993 25372298 -60066182 - AluSp SINE Alu -18 295 1 200 292 0 0 chr17 25372576 25372624 -60065856 + GA-rich Low_complexity Low_complexity 3 50 0 198 103 0 0 chr17 25372747 25372776 -60065704 + (GGAAA)n Simple_repeat Simple_repeat 5 33 0 1459 186 33 7 chr17 25372777 25373052 -60065428 - AluSx SINE Alu -30 282 1 2454 75 3 0 chr17 25373921 25374227 -60064253 + AluY SINE Alu 1 307 -4 2190 98 0 14 chr17 25375202 25375488 -60062992 + AluSg SINE Alu 17 298 -12 1763 158 23 26 chr17 25375497 25375800 -60062680 + AluSq SINE Alu 6 307 -6 2271 95 3 3 chr17 25376634 25376929 -60061551 + AluSx SINE Alu 1 295 -17 2233 95 20 3 chr17 25376945 25377239 -60061241 + AluSq SINE Alu 1 299 -14 856 152 0 67 chr17 25377603 25377750 -60060730 + FRAM SINE Alu 1 23 -153 2592 54 0 22 chr17 25377750 25378066 -60060414 + AluY SINE Alu 1 309 -2 856 152 0 67 chr17 25378066 25378083 -60060397 + FRAM SINE Alu 23 40 0 245 267 22 7 chr17 25378778 25378913 -60059567 + L1M4 LINE L1 5248 5384 -762 2095 115 3 26 chr17 25380140 25380444 -60058036 - AluSx SINE Alu -15 297 1 2381 92 3 3 chr17 25380455 25380758 -60057722 - AluSc SINE Alu -6 303 1 219 268 42 101 chr17 25380880 25381048 -60057432 - MIR SINE MIR -3 259 102 2074 119 3 16 chr17 25381183 25381495 -60056985 + AluSq SINE Alu 1 308 -5 1057 125 0 13 chr17 25381495 25381647 -60056833 + AluSg/x SINE Alu 132 281 -29 1346 196 44 40 chr17 25381813 25382109 -60056371 + AluJo SINE Alu 1 297 -5 1172 187 4 22 chr17 25382109 25382334 -60056146 + AluJo SINE Alu 86 306 -6 192 314 16 66 chr17 25382481 25382602 -60055878 - L2 LINE L2 -164 3108 2994 328 358 13 13 chr17 25382755 25382906 -60055574 - L2 LINE L2 -568 2746 2596 209 324 29 0 chr17 25383047 25383115 -60055365 - MIR SINE MIR -71 191 122 233 295 152 0 chr17 25383223 25383328 -60055152 + MIR SINE MIR 23 143 -65 420 154 0 0 chr17 25383810 25383875 -60054605 + AluJ/FLAM SINE Alu 2 66 -246 606 129 88 95 chr17 25383876 25384023 -60054457 + AluJo/FRAM SINE Alu 165 310 -2 1850 88 8 0 chr17 25384027 25384293 -60054187 + AluSx SINE Alu 45 312 0 590 207 0 0 chr17 25384460 25384571 -60053909 - L1ME LINE L1 -417 5747 5637 2220 97 0 29 chr17 25384574 25384883 -60053597 - AluY SINE Alu -11 300 1 2281 106 3 0 chr17 25384893 25385194 -60053286 - AluY SINE Alu -9 302 1 964 202 29 4 chr17 25385194 25385437 -60053043 - L1ME LINE L1 -874 5272 5024 819 153 0 0 chr17 25385438 25385556 -60052924 + FLAM_C SINE Alu 1 118 -25 239 53 0 26 chr17 25385559 25385597 -60052883 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr17 25385597 25385618 -60052862 + AT_rich Low_complexity Low_complexity 1 21 0 347 164 15 0 chr17 25385638 25385705 -60052775 - L1ME LINE L1 -1236 4910 4843 1356 109 16 0 chr17 25385721 25385914 -60052566 - AluSg/x SINE Alu -3 307 112 2366 97 3 0 chr17 25386082 25386391 -60052089 - AluSx SINE Alu -2 310 1 2144 104 0 46 chr17 25386402 25386729 -60051751 - AluSx SINE Alu 0 312 1 26 0 0 0 chr17 25386730 25386756 -60051724 + AT_rich Low_complexity Low_complexity 1 26 0 2112 105 35 0 chr17 25387015 25387300 -60051180 - AluSx SINE Alu -7 305 11 1221 76 0 0 chr17 25388088 25388233 -60050247 - AluSg1 SINE Alu -164 145 1 2111 108 0 17 chr17 25388264 25388416 -60050064 - AluSc SINE Alu -26 283 137 2260 115 3 0 chr17 25388416 25388728 -60049752 - AluSp SINE Alu 0 313 1 2111 108 0 17 chr17 25388728 25388863 -60049617 - AluSc SINE Alu -172 137 1 2063 142 3 0 chr17 25388894 25389182 -60049298 + AluJb SINE Alu 1 289 -23 2116 122 7 7 chr17 25389191 25389485 -60048995 + AluSq SINE Alu 1 294 -19 2048 122 31 3 chr17 25389509 25389796 -60048684 + AluSq SINE Alu 1 295 -18 575 182 0 18 chr17 25389796 25389906 -60048574 - AluJo/FLAM SINE Alu -194 118 11 233 283 106 18 chr17 25390159 25390272 -60048208 + MIR SINE MIR 23 145 -117 2189 124 3 0 chr17 25390276 25390575 -60047905 + AluSx SINE Alu 1 300 -12 2155 88 4 4 chr17 25390575 25390848 -60047632 + AluSg SINE Alu 1 273 -37 1206 74 0 0 chr17 25390953 25391102 -60047378 - AluSp/q SINE Alu 0 313 165 1713 166 7 23 chr17 25391136 25391443 -60047037 + AluJb SINE Alu 1 302 -10 1434 213 24 73 chr17 25391625 25391760 -60046720 - L1ME1 LINE L1 -38 6128 5988 2330 87 3 7 chr17 25391760 25392059 -60046421 - AluSg SINE Alu -12 298 1 1434 213 24 73 chr17 25392059 25392072 -60046408 - L1ME1 LINE L1 -178 5988 5976 1409 106 173 16 chr17 25392072 25392327 -60046153 - AluSg SINE Alu -5 295 1 1434 213 24 73 chr17 25392327 25392600 -60045880 - L1ME1 LINE L1 -190 5976 5727 1882 135 0 17 chr17 25392854 25393151 -60045329 + AluSq SINE Alu 1 292 -21 1053 170 5 10 chr17 25393155 25393349 -60045131 + AluSg/x SINE Alu 120 312 0 328 210 4 0 chr17 25393349 25393419 -60045061 - L1MC4 LINE L1 -1339 6983 1995 973 168 12 0 chr17 25393421 25393588 -60044892 + AluSg/x SINE Alu 130 298 -14 424 318 51 17 chr17 25393697 25393873 -60044607 + L2 LINE L2 1807 1988 -1326 1041 171 4 92 chr17 25393874 25394113 -60044367 - AluJb SINE Alu -9 303 86 954 286 184 33 chr17 25394113 25394392 -60044088 + L2 LINE L2 1981 2216 -1098 2475 63 0 0 chr17 25394392 25394693 -60043787 - AluY SINE Alu -10 301 1 1641 180 3 3 chr17 25394698 25394993 -60043487 - AluJo SINE Alu -9 303 9 954 286 184 33 chr17 25394993 25395287 -60043193 + L2 LINE L2 2219 2648 -666 1358 84 52 5 chr17 25395299 25395490 -60042990 - AluSp SINE Alu -21 292 93 397 147 0 29 chr17 25395593 25395661 -60042819 - AluS SINE Alu -234 66 1 242 241 56 0 chr17 25395710 25395764 -60042716 + L2 LINE L2 3207 3263 -9 1623 159 0 49 chr17 25395988 25396296 -60042184 - AluJb SINE Alu -14 298 6 1993 121 13 13 chr17 25396308 25396614 -60041866 - AluSg SINE Alu -4 306 1 302 44 0 44 chr17 25396700 25396745 -60041735 + AluSq SINE Alu 15 57 -243 2079 206 68 25 chr17 25396746 25397216 -60041264 - LTR2B LTR ERV1 0 490 1 1639 127 8 0 chr17 25397217 25397461 -60041019 + AluSq SINE Alu 56 301 -12 1794 119 6 61 chr17 25397475 25397786 -60040694 + AluSg SINE Alu 1 294 -16 2259 73 13 10 chr17 25397788 25398109 -60040371 + AluY SINE Alu 1 311 0 1228 112 0 0 chr17 25398114 25398283 -60040197 + AluSx SINE Alu 1 169 -143 240 279 68 54 chr17 25398612 25398759 -60039721 + L2 LINE L2 2924 3072 -200 821 154 0 22 chr17 25399058 25399194 -60039286 + FLAM_C SINE Alu 1 133 0 1911 107 45 3 chr17 25399210 25399500 -60038980 + AluSg SINE Alu 1 302 -8 2175 110 13 0 chr17 25399506 25399805 -60038675 + AluSx SINE Alu 3 305 -7 394 354 96 37 chr17 25399955 25400778 -60037702 + L2 LINE L2 2188 3059 -213 703 101 10 0 chr17 25400891 25400990 -60037490 + HY3 scRNA scRNA 1 100 -1 219 69 0 0 chr17 25400990 25401019 -60037461 + (A)n Simple_repeat Simple_repeat 1 29 0 1105 159 0 0 chr17 25401024 25401194 -60037286 - AluSg/x SINE Alu -12 298 129 360 0 0 0 chr17 25401194 25401234 -60037246 + (TG)n Simple_repeat Simple_repeat 1 40 0 255 91 0 0 chr17 25401247 25401280 -60037200 - Alu SINE Alu -34 266 234 1335 174 3 69 chr17 25401380 25401538 -60036942 - AluJo SINE Alu -27 285 155 2208 106 3 0 chr17 25401538 25401840 -60036640 - AluSp SINE Alu -10 303 1 1335 174 3 69 chr17 25401840 25401986 -60036494 - AluJo SINE Alu -157 155 1 288 274 26 17 chr17 25402003 25402120 -60036360 + (TG)n Simple_repeat Simple_repeat 1 118 0 301 301 18 9 chr17 25402186 25402299 -60036181 + MIR3 SINE MIR 90 203 -5 1976 128 3 3 chr17 25403129 25403426 -60035054 - AluSx SINE Alu -15 297 1 1700 159 0 72 chr17 25403444 25403777 -60034703 - AluJb SINE Alu -1 311 3 182 286 61 0 chr17 25403832 25403881 -60034599 - MIR SINE MIR -138 124 73 342 309 99 9 chr17 25403905 25404121 -60034359 - MIR SINE MIR -6 256 23 301 260 31 31 chr17 25404279 25404375 -60034105 - MIR SINE MIR -88 174 79 2174 103 7 3 chr17 25404494 25404804 -60033676 + AluSx SINE Alu 1 311 -1 237 298 7 106 chr17 25404893 25404957 -60033523 - L2 LINE L2 -208 3064 3020 1834 143 27 0 chr17 25404957 25405251 -60033229 + AluJb SINE Alu 6 307 -5 237 298 7 106 chr17 25405251 25405327 -60033153 - L2 LINE L2 -252 3020 2938 200 81 81 0 chr17 25405838 25405875 -60032605 + A-rich Low_complexity Low_complexity 3 42 0 861 142 0 15 chr17 25406919 25407053 -60031427 + FLAM_C SINE Alu 2 133 0 701 200 24 0 chr17 25407732 25407857 -60030623 + FLAM_A SINE Alu 1 128 -5 2280 99 0 3 chr17 25407861 25408173 -60030307 + AluSx SINE Alu 1 311 -1 1572 153 23 39 chr17 25408184 25408331 -60030149 + AluJb SINE Alu 9 157 -155 1948 109 0 0 chr17 25408331 25408598 -60029882 + AluSx SINE Alu 34 300 -12 1572 153 23 39 chr17 25408598 25408758 -60029722 + AluJb SINE Alu 157 311 -1 2408 84 0 0 chr17 25410397 25410708 -60027772 + AluY SINE Alu 1 311 0 265 226 84 71 chr17 25411316 25411471 -60027009 + MIR SINE MIR 105 261 -1 2610 39 0 0 chr17 25413166 25413471 -60025009 + AluY SINE Alu 1 305 -6 837 188 7 7 chr17 25413512 25413666 -60024814 - FRAM SINE Alu -24 152 1 253 233 83 75 chr17 25413672 25413805 -60024675 - L2 LINE L2 -16 3297 3164 471 47 0 93 chr17 25413806 25413892 -60024588 - MER2 DNA MER2_type -137 208 131 1540 160 10 35 chr17 25414023 25414197 -60024283 - AluJb SINE Alu -8 304 140 2167 103 3 3 chr17 25414197 25414499 -60023981 - AluSp SINE Alu -9 304 3 1540 160 10 35 chr17 25414499 25414636 -60023844 - AluJb SINE Alu -172 140 1 277 250 15 0 chr17 25414636 25414704 -60023776 + MER2 DNA MER2_type 272 340 -5 1255 174 87 47 chr17 25414742 25415041 -60023439 - AluJb SINE Alu -1 311 1 2136 68 39 0 chr17 25415047 25415327 -60023153 - AluY SINE Alu -20 291 1 1374 193 0 85 chr17 25415354 25415510 -60022970 - AluJb SINE Alu -23 289 121 2132 108 16 0 chr17 25415510 25415817 -60022663 - AluSq SINE Alu -1 312 1 1374 193 0 85 chr17 25415817 25415872 -60022608 - AluJb SINE Alu -191 121 63 195 42 0 0 chr17 25415872 25415896 -60022584 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1947 88 0 4 chr17 25415901 25416162 -60022318 - AluSq SINE Alu -53 260 1 1374 193 0 85 chr17 25416162 25416259 -60022221 - AluJb SINE Alu -253 59 1 1995 119 0 0 chr17 25416270 25416573 -60021907 - AluSg SINE Alu 0 304 2 2297 83 7 0 chr17 25417733 25418033 -60020447 - AluSp SINE Alu -11 302 1 2458 66 0 0 chr17 25418037 25418342 -60020138 - AluSq SINE Alu -6 307 3 2521 43 3 0 chr17 25418974 25419279 -60019201 + AluY SINE Alu 1 306 -5 1805 147 6 31 chr17 25419279 25419415 -60019065 + AluJb SINE Alu 2 140 -172 2010 128 3 7 chr17 25419415 25419713 -60018767 + AluSx SINE Alu 1 297 -15 2344 77 3 0 chr17 25419716 25420026 -60018454 + AluY SINE Alu 1 311 0 1805 147 6 31 chr17 25420026 25420204 -60018276 + AluJb SINE Alu 142 312 0 2109 127 0 0 chr17 25420210 25420517 -60017963 + AluY SINE Alu 1 307 -4 2371 70 0 0 chr17 25420518 25420816 -60017664 + AluY SINE Alu 1 298 -13 838 184 17 40 chr17 25420816 25420990 -60017490 + AluSg/x SINE Alu 134 303 -9 1253 167 87 47 chr17 25420996 25421295 -60017185 + AluJb SINE Alu 1 311 -1 308 268 0 0 chr17 25421331 25421402 -60017078 - MER2 DNA MER2_type -3 342 272 847 176 7 0 chr17 25421403 25421539 -60016941 + AluJo SINE Alu 2 138 -174 2154 102 16 0 chr17 25421539 25421843 -60016637 + AluSx SINE Alu 2 310 -2 1971 129 0 22 chr17 25421909 25422226 -60016254 + AluSg SINE Alu 1 310 0 2375 77 0 0 chr17 25422229 25422540 -60015940 + AluY SINE Alu 1 311 0 346 225 56 0 chr17 25422591 25422662 -60015818 + AluJ/FLAM SINE Alu 3 77 -225 254 200 0 55 chr17 25422662 25422717 -60015763 + L2 LINE L2 3221 3272 0 230 323 91 0 chr17 25422740 25422839 -60015641 - MLT1L LTR MaLR -221 394 287 388 292 83 7 chr17 25422844 25422988 -60015492 - MLT1K LTR MaLR -356 232 78 2023 101 10 0 chr17 25423077 25423365 -60015115 + AluSg SINE Alu 3 293 -17 2515 64 0 0 chr17 25423514 25423825 -60014655 - AluY SINE Alu 0 311 1 2023 120 20 3 chr17 25424612 25424913 -60013567 + AluSx SINE Alu 1 306 -6 946 161 0 42 chr17 25424913 25425081 -60013399 + AluJb SINE Alu 134 294 -18 253 284 20 49 chr17 25425083 25425185 -60013295 + L2 LINE L2 2380 2478 -836 227 274 18 26 chr17 25425189 25425302 -60013178 + L1ME3A LINE L1 6043 6154 -16 354 150 0 0 chr17 25425352 25425412 -60013068 - Alu SINE Alu 0 302 243 2179 86 31 66 chr17 25425445 25425795 -60012685 - LTR12 LTR ERV1 0 714 377 392 252 35 0 chr17 25425795 25425910 -60012570 - LTR30 LTR ERV1 -79 643 525 2768 209 89 10 chr17 25425913 25426138 -60012342 - L1ME3A LINE L1 -15 6155 5949 2162 109 0 7 chr17 25426138 25426440 -60012040 - AluSx SINE Alu -9 303 4 1317 182 66 42 chr17 25426444 25426730 -60011750 - AluJb SINE Alu -19 293 1 2768 209 89 10 chr17 25426730 25427208 -60011272 - L1ME3A LINE L1 -223 5947 5391 1043 276 40 21 chr17 25427210 25427760 -60010720 - MLT1G1 LTR MaLR 0 555 1 259 226 62 110 chr17 25427785 25427931 -60010549 - L1ME3A LINE L1 -813 5333 5195 994 164 24 0 chr17 25427931 25428096 -60010384 - AluJo/FRAM SINE Alu -10 302 134 2132 99 3 3 chr17 25428096 25428389 -60010091 - AluSq SINE Alu -20 293 1 652 214 73 66 chr17 25428400 25428606 -60009874 - L1ME3A LINE L1 -990 5156 4946 1846 123 45 14 chr17 25428606 25428763 -60009717 - AluSg SINE Alu -9 301 129 2286 89 0 3 chr17 25428763 25429066 -60009414 - AluY SINE Alu -9 302 1 1846 123 45 14 chr17 25429066 25429200 -60009280 - AluSg SINE Alu -181 129 1 652 214 73 66 chr17 25429200 25429282 -60009198 - L1ME3A LINE L1 -1200 4946 4866 839 259 161 14 chr17 25429289 25429816 -60008664 + L2 LINE L2 2696 3311 -2 362 376 0 0 chr17 25429802 25429927 -60008553 - MIR SINE MIR -120 142 18 * 900 152 0 0 chr17 25430013 25430145 -60008335 - FLAM_A SINE Alu -1 132 1 198 296 70 56 chr17 25432639 25432781 -60005699 - MIR SINE MIR -29 233 90 235 291 154 9 chr17 25436430 25436540 -60001940 + L2 LINE L2 3188 3313 0 272 188 14 0 chr17 25438041 25438110 -60000370 + GA-rich Low_complexity Low_complexity 1 70 0 186 205 0 0 chr17 25439380 25439419 -59999061 + L2 LINE L2 3017 3055 -217 184 304 53 53 chr17 25440196 25440367 -59998113 - L2 LINE L2 -51 3262 3092 1974 128 3 7 chr17 25440385 25440682 -59997798 - AluSq SINE Alu -17 296 1 2250 109 0 0 chr17 25440685 25440988 -59997492 - AluSg SINE Alu -7 303 1 2502 50 0 0 chr17 25441437 25441735 -59996745 - AluY SINE Alu -12 299 2 1851 135 0 58 chr17 25441906 25442231 -59996249 - AluJb SINE Alu -6 306 1 208 226 161 0 chr17 25442496 25442558 -59995922 - L2 LINE L2 -650 2664 2593 772 183 122 61 chr17 25442584 25442781 -59995699 + MER3 DNA MER1_type 1 209 0 2092 75 67 0 chr17 25443405 25443689 -59994791 - AluY SINE Alu -10 301 1 2144 138 0 0 chr17 25443701 25444001 -59994479 - AluSx SINE Alu -14 298 1 324 264 57 14 chr17 25446353 25446493 -59991987 + MIR SINE MIR 29 174 -88 185 328 66 0 chr17 25446539 25446600 -59991880 + MER5A DNA MER1_type 66 130 -59 * 192 246 145 43 chr17 25446551 25446620 -59991860 - MER5A DNA MER1_type -67 122 47 257 370 0 0 chr17 25446850 25446923 -59991557 + MIR SINE MIR 30 102 -106 689 127 8 17 chr17 25447421 25447539 -59990941 + FLAM_A SINE Alu 26 142 0 231 359 13 13 chr17 25447774 25447852 -59990628 - L2 LINE L2 -6 3307 3230 1331 220 115 36 chr17 25448011 25448186 -59990294 + L2 LINE L2 2757 2917 -396 2000 120 3 45 chr17 25448186 25448376 -59990104 - AluSx SINE Alu -16 296 122 2479 78 7 0 chr17 25448376 25448684 -59989796 - AluSg SINE Alu 0 310 1 2000 120 3 45 chr17 25448684 25448802 -59989678 - AluSx SINE Alu -190 122 1 1331 220 115 36 chr17 25448802 25449143 -59989337 + L2 LINE L2 2917 3309 -4 734 214 24 36 chr17 25450225 25450393 -59988087 + MIR SINE MIR 45 210 -52 371 305 114 35 chr17 25450416 25450925 -59987555 + L2 LINE L2 2556 3111 -161 653 55 9 36 chr17 25452121 25452231 -59986249 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 2171 134 3 0 chr17 25452231 25452537 -59985943 - AluSq SINE Alu -6 307 1 230 298 67 48 chr17 25452950 25453054 -59985426 - L2 LINE L2 -22 3250 3145 219 311 148 0 chr17 25453378 25453513 -59984967 - MIR3 SINE MIR -33 175 21 1724 146 34 17 chr17 25456644 25456938 -59981542 - AluJb SINE Alu -13 299 1 545 217 0 151 chr17 25457537 25457749 -59980731 - MER5A DNA MER1_type 0 189 10 2026 149 0 0 chr17 25457899 25458209 -59980271 - AluJb SINE Alu 0 310 1 442 341 16 4 chr17 25460491 25460653 -59977827 + MIR3 SINE MIR 3 165 -68 2522 54 7 0 chr17 25462709 25463005 -59975475 + AluY SINE Alu 1 298 -13 2388 75 0 7 chr17 25463531 25463823 -59974657 + AluSp SINE Alu 3 292 -21 1988 161 0 0 chr17 25464145 25464456 -59974024 + AluY SINE Alu 1 311 0 199 313 0 0 chr17 25464458 25464506 -59973974 + MIR SINE MIR 209 256 -6 638 296 94 62 chr17 25464626 25465342 -59973138 - L2 LINE L2 0 3272 2165 2332 96 0 3 chr17 25465957 25466250 -59972230 - AluSq SINE Alu -21 292 1 201 216 0 59 chr17 25466926 25466977 -59971503 + MIR SINE MIR 106 153 -109 2101 96 0 27 chr17 25469210 25469534 -59968946 + AluSx SINE Alu 6 312 0 2366 91 0 0 chr17 25470329 25470615 -59967865 - AluSc SINE Alu -23 286 1 2337 90 0 34 chr17 25470616 25470938 -59967542 - AluY SINE Alu 0 311 1 1409 178 82 32 chr17 25470940 25471221 -59967259 - AluJb SINE Alu -17 295 1 1283 187 4 26 chr17 25471918 25472148 -59966332 - AluJo SINE Alu -87 225 1 982 232 131 71 chr17 25472286 25472553 -59965927 + L1MC4a LINE L1 5566 5816 -1992 1415 157 138 8 chr17 25472553 25472814 -59965666 + AluJo SINE Alu 1 295 -17 982 232 131 71 chr17 25472814 25473097 -59965383 + L1MC4a LINE L1 5816 6149 -1659 2227 121 19 3 chr17 25473130 25473437 -59965043 + AluSx SINE Alu 1 312 0 2516 89 0 0 chr17 25474424 25474726 -59963754 + AluSx SINE Alu 1 302 -10 320 316 43 50 chr17 25474891 25475099 -59963381 + MIR3 SINE MIR 6 207 -55 321 283 93 55 chr17 25475371 25475608 -59962872 + MIR3 SINE MIR 7 252 -10 1232 243 114 44 chr17 25477311 25477584 -59960896 + MLT1H1 LTR MaLR 1 254 -301 2205 142 0 0 chr17 25477584 25477880 -59960600 + AluSx SINE Alu 1 296 -16 1232 243 114 44 chr17 25477880 25478125 -59960355 + MLT1H1 LTR MaLR 254 555 0 1647 130 27 0 chr17 25478310 25478571 -59959909 + AluSq SINE Alu 56 322 0 2128 100 0 0 chr17 25478571 25478841 -59959639 + AluSg SINE Alu 1 270 -40 354 146 16 0 chr17 25478941 25479015 -59959465 - AluS SINE Alu -242 61 1 246 327 58 45 chr17 25479573 25479729 -59958751 + L2 LINE L2 2896 3053 -219 274 324 14 0 chr17 25479803 25479874 -59958606 + L2 LINE L2 3186 3257 -15 1935 146 36 3 chr17 25480245 25480546 -59957934 + AluJb SINE Alu 1 311 -1 2443 83 0 3 chr17 25480714 25481014 -59957466 - AluSx SINE Alu -13 299 1 2229 120 0 0 chr17 25481039 25481339 -59957141 - AluSx SINE Alu -12 300 1 1952 154 0 7 chr17 25481592 25481891 -59956589 - AluJb SINE Alu -15 297 1 2143 129 14 0 chr17 25482121 25482416 -59956064 + AluSx SINE Alu 1 299 -13 378 283 253 6 chr17 25482784 25482950 -59955530 - MIR SINE MIR -50 212 6 1785 177 10 0 chr17 25483225 25483513 -59954967 + AluJb SINE Alu 1 291 -21 225 311 66 0 chr17 25483541 25483602 -59954878 - L2 LINE L2 0 3313 3249 2188 109 33 10 chr17 25484053 25484357 -59954123 - AluSx SINE Alu 0 312 2 2134 121 0 0 chr17 25484714 25485029 -59953451 - AluSx SINE Alu 0 315 1 202 273 0 30 chr17 25485768 25485834 -59952646 + GA-rich Low_complexity Low_complexity 2 65 0 29 0 0 0 chr17 25486579 25486608 -59951872 + AT_rich Low_complexity Low_complexity 1 29 0 2301 108 3 0 chr17 25487689 25487985 -59950495 - AluSg SINE Alu -13 297 1 2090 100 28 14 chr17 25491075 25491364 -59947116 - AluSq SINE Alu -20 293 1 1520 158 4 23 chr17 25491732 25491991 -59946489 + AluJo SINE Alu 43 296 -16 2307 104 0 0 chr17 25491993 25492317 -59946163 + AluSg SINE Alu 1 324 0 2173 166 51 28 chr17 25492324 25492810 -59945670 + L1MB8 LINE L1 5190 5691 -493 2147 125 3 13 chr17 25492810 25493140 -59945340 + AluSq SINE Alu 6 313 0 2173 166 51 28 chr17 25493140 25493198 -59945282 + L1MB8 LINE L1 5691 5746 -438 565 151 40 16 chr17 25493298 25493424 -59945056 + L1MB8 LINE L1 5748 5876 -302 848 145 0 0 chr17 25494102 25494226 -59944254 + AluSg/x SINE Alu 183 306 -6 186 43 0 0 chr17 25494265 25494288 -59944192 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1175 185 162 8 chr17 25494548 25494807 -59943673 + AluJo SINE Alu 1 299 -3 2199 91 14 7 chr17 25495409 25495706 -59942774 + AluSg SINE Alu 1 299 -11 789 154 0 37 chr17 25496258 25496394 -59942086 - FLAM_C SINE Alu -1 132 2 427 308 123 11 chr17 25501054 25501239 -59937241 - MIR3 SINE MIR -4 204 1 1506 183 14 11 chr17 25502787 25503066 -59935414 + AluJb SINE Alu 27 306 -6 234 0 0 0 chr17 25503178 25503204 -59935276 + (T)n Simple_repeat Simple_repeat 1 26 0 189 0 0 0 chr17 25504486 25504507 -59933973 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 370 273 101 0 chr17 25506107 25506246 -59932234 - MIR SINE MIR -87 175 23 1871 143 33 0 chr17 25506840 25507141 -59931339 + AluSx SINE Alu 1 311 -1 220 272 148 0 chr17 25507156 25507237 -59931243 - L3b LINE CR1 -221 1362 1270 311 318 0 0 chr17 25508419 25508507 -59929973 + L2 LINE L2 3185 3272 0 197 255 39 0 chr17 25509570 25509621 -59928859 + MIR SINE MIR 64 116 -92 397 325 104 31 chr17 25510329 25510801 -59927679 + L2 LINE L2 2709 3218 -54 2253 98 0 7 chr17 25510831 25511136 -59927344 + AluSx SINE Alu 1 303 -9 2428 70 0 0 chr17 25511177 25511479 -59927001 + AluY SINE Alu 1 302 -9 294 352 137 20 chr17 25511804 25512162 -59926318 + L2 LINE L2 2870 3269 -3 266 390 71 9 chr17 25512942 25513152 -59925328 + L2 LINE L2 3088 3310 -3 331 281 84 43 chr17 25513659 25513894 -59924586 + MIR SINE MIR 3 256 -6 2231 78 7 0 chr17 25514100 25514393 -59924087 + AluSp SINE Alu 1 295 -18 2277 90 0 10 chr17 25514394 25514705 -59923775 + AluSq SINE Alu 1 308 -5 1472 180 11 11 chr17 25514725 25514992 -59923488 + AluJo SINE Alu 45 311 -1 2005 103 0 14 chr17 25515183 25515464 -59923016 + AluSx SINE Alu 3 279 -33 298 0 48 0 chr17 25515471 25515513 -59922967 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 2000 103 17 31 chr17 25515523 25515815 -59922665 + AluSg SINE Alu 1 288 -22 644 304 60 0 chr17 25516265 25516482 -59921998 + MIR SINE MIR 2 231 -31 272 259 156 22 chr17 25516613 25516748 -59921732 - MIR SINE MIR -98 164 12 243 333 83 30 chr17 25516940 25517072 -59921408 - MIR SINE MIR -5 257 119 519 309 119 10 chr17 25518312 25518513 -59919967 - MIR SINE MIR -38 224 2 426 324 83 0 chr17 25518666 25518811 -59919669 + L2 LINE L2 3116 3272 0 250 292 35 35 chr17 25519443 25519556 -59918924 - MIR SINE MIR -63 145 33 243 202 11 124 chr17 25519585 25519674 -59918806 + MIR3 SINE MIR 104 182 -26 417 351 142 46 chr17 25519684 25520228 -59918252 + L2 LINE L2 2265 2860 -454 294 290 137 46 chr17 25520415 25520546 -59917934 + MIR3 SINE MIR 2 144 -64 442 275 162 0 chr17 25520561 25520634 -59917846 + MER5A DNA MER1_type 4 64 -125 2413 82 0 0 chr17 25520634 25520938 -59917542 + AluSp SINE Alu 1 304 -9 442 275 162 0 chr17 25520938 25521006 -59917474 + MER5A DNA MER1_type 64 168 -21 381 278 120 0 chr17 25521921 25522029 -59916451 + L3 LINE CR1 1455 1575 -2 318 267 76 5 chr17 25522426 25522557 -59915923 - MIR SINE MIR -44 218 75 350 326 26 47 chr17 25523824 25524018 -59914462 - MIR SINE MIR -56 206 19 634 270 98 0 chr17 25524205 25524409 -59914071 + MIR SINE MIR 20 243 -19 380 358 40 6 chr17 25524682 25524858 -59913622 - MIR3 SINE MIR -26 182 1 519 254 179 46 chr17 25526158 25526398 -59912082 + L2 LINE L2 2997 3268 -4 222 295 0 0 chr17 25526419 25526480 -59912000 + MIR SINE MIR 75 135 -73 355 318 182 41 chr17 25527694 25528445 -59910035 - L2 LINE L2 -100 3172 2302 236 405 16 8 chr17 25528532 25528658 -59909822 + L2 LINE L2 3132 3258 -14 195 42 0 0 chr17 25528659 25528683 -59909797 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 405 0 0 0 chr17 25529205 25529250 -59909230 + (TG)n Simple_repeat Simple_repeat 1 45 0 1007 76 8 0 chr17 25529339 25529470 -59909010 - AluY SINE Alu -179 132 1 342 289 26 77 chr17 25529471 25529518 -59908962 - MIR SINE MIR -55 207 159 2222 111 3 9 chr17 25529518 25529696 -59908784 - AluSq SINE Alu 0 313 136 2258 75 7 3 chr17 25529696 25529991 -59908489 - AluY SINE Alu -15 296 1 2222 111 3 9 chr17 25529991 25530127 -59908353 - AluSq SINE Alu -177 136 1 342 289 26 77 chr17 25530127 25530224 -59908256 - MIR SINE MIR -103 159 73 2157 115 0 0 chr17 25530224 25530519 -59907961 - AluSx SINE Alu -17 295 1 342 289 26 77 chr17 25530519 25530567 -59907913 - MIR SINE MIR -189 73 24 285 98 0 0 chr17 25530708 25530749 -59907731 + (TGG)n Simple_repeat Simple_repeat 3 43 0 448 282 53 0 chr17 25531549 25531719 -59906761 - MER117 DNA MER1_type -17 180 2 339 238 129 10 chr17 25531734 25531835 -59906645 - MIR SINE MIR -62 146 34 1604 145 25 63 chr17 25531972 25532289 -59906191 - AluJb SINE Alu -7 305 1 511 238 28 28 chr17 25532393 25532536 -59905944 + MIR SINE MIR 3 145 -117 384 268 30 30 chr17 25532680 25532848 -59905632 - MER117 DNA MER1_type -29 168 1 380 87 43 14 chr17 25534382 25534451 -59904029 - MADE1 DNA Mariner -1 79 9 288 256 47 39 chr17 25534461 25534590 -59903890 - L1ME LINE L1 -460 5661 5532 360 0 0 0 chr17 25535337 25535377 -59903103 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 57 0 0 chr17 25535907 25535942 -59902538 + GC_rich Low_complexity Low_complexity 1 35 0 1920 146 0 3 chr17 25536205 25536506 -59901974 - AluSc SINE Alu -9 300 1 1122 44 0 7 chr17 25536506 25536641 -59901839 - AluY SINE Alu -177 134 1 1967 123 3 3 chr17 25536804 25537105 -59901375 - AluY SINE Alu -10 301 1 2007 115 0 3 chr17 25537281 25537567 -59900913 - AluSc SINE Alu -24 285 1 1146 37 0 7 chr17 25537567 25537702 -59900778 - AluY SINE Alu -177 134 1 2328 73 3 3 chr17 25537865 25538166 -59900314 - AluY SINE Alu -10 301 1 342 220 0 0 chr17 25538242 25538342 -59900138 + (TG)n Simple_repeat Simple_repeat 1 100 0 180 362 19 38 chr17 25538466 25538571 -59899909 - MIR3 SINE MIR -45 163 61 817 83 33 16 chr17 25538996 25539117 -59899363 - Alu SINE Alu -10 301 179 295 172 16 16 chr17 25539256 25539320 -59899160 - MER117 DNA MER1_type -133 64 1 380 323 99 37 chr17 25540737 25540951 -59897529 - MIR SINE MIR -37 225 3 209 295 77 0 chr17 25540997 25541075 -59897405 - MIR SINE MIR -72 136 53 412 231 58 10 chr17 25541233 25541337 -59897143 + MIR SINE MIR 36 144 -118 345 317 24 0 chr17 25542285 25542410 -59896070 - MIR SINE MIR -61 147 38 310 245 57 28 chr17 25542504 25542610 -59895870 + MIR SINE MIR 38 146 -62 298 264 38 28 chr17 25543342 25543448 -59895032 - MIR SINE MIR -61 147 41 553 298 76 18 chr17 25543490 25543715 -59894765 - MIR SINE MIR -12 250 13 212 319 50 21 chr17 25543908 25544049 -59894431 + L2 LINE L2 2911 3055 -217 283 227 173 0 chr17 25544567 25544677 -59893803 - MIR3 SINE MIR -22 186 58 231 297 68 0 chr17 25544747 25544821 -59893659 - L3 LINE CR1 -113 1464 1386 242 376 194 0 chr17 25544864 25545034 -59893446 + MIR3 SINE MIR 3 205 -3 496 277 138 20 chr17 25545075 25545270 -59893210 - MIR SINE MIR -14 248 31 232 130 65 0 chr17 25545270 25545316 -59893164 + MER3 DNA MER1_type 1 49 -160 23 33 0 0 chr17 25545302 25545332 -59893148 + AT_rich Low_complexity Low_complexity 1 30 0 * 1532 93 7 123 chr17 25545371 25545582 -59892898 + LTR8A LTR ERV1 1 168 -559 2037 109 0 14 chr17 25545582 25545867 -59892613 + AluSq SINE Alu 1 281 -32 1532 93 7 123 chr17 25545867 25545956 -59892524 + LTR8A LTR ERV1 168 266 -461 838 125 0 0 chr17 25546058 25546178 -59892302 + AluSg/x SINE Alu 184 303 -9 221 235 44 29 chr17 25546198 25546266 -59892214 - MIR SINE MIR -76 132 64 216 243 0 0 chr17 25548035 25548109 -59890371 + (CA)n Simple_repeat Simple_repeat 2 75 0 323 330 99 19 chr17 25548143 25548355 -59890125 + MIR SINE MIR 27 255 -7 337 148 0 0 chr17 25548891 25548945 -59889535 - MER3 DNA MER1_type -1 208 155 2312 71 0 3 chr17 25548945 25549242 -59889238 + AluSx SINE Alu 1 296 -16 2034 118 11 0 chr17 25549246 25549533 -59888947 + AluSx SINE Alu 1 290 -22 23 0 0 0 chr17 25549533 25549556 -59888924 + AT_rich Low_complexity Low_complexity 1 23 0 273 282 136 0 chr17 25551268 25551371 -59887109 - MIR3 SINE MIR -78 130 14 285 98 0 0 chr17 25551559 25551600 -59886880 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 187 79 53 0 chr17 25552572 25552610 -59885870 + (TGGA)n Simple_repeat Simple_repeat 1 40 0 475 286 23 0 chr17 25553514 25553647 -59884833 + MIR SINE MIR 127 262 0 416 287 112 7 chr17 25553783 25553926 -59884554 + MIR SINE MIR 64 221 -41 258 211 113 14 chr17 25554373 25554444 -59884036 - L2 LINE L2 0 3313 3236 285 339 46 8 chr17 25555003 25555133 -59883347 - L2 LINE L2 -237 3035 2901 200 246 35 0 chr17 25556457 25556514 -59881966 - MIR SINE MIR -82 126 68 360 0 0 0 chr17 25558563 25558603 -59879877 + (TG)n Simple_repeat Simple_repeat 2 41 0 29 70 0 0 chr17 25559133 25559190 -59879290 + GC_rich Low_complexity Low_complexity 1 57 0 218 167 0 0 chr17 25559464 25559500 -59878980 + (CCG)n Simple_repeat Simple_repeat 2 37 0 182 36 0 36 chr17 25560324 25560352 -59878128 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1576 150 40 25 chr17 25560354 25560628 -59877852 - AluJo SINE Alu -30 282 5 513 278 117 0 chr17 25562165 25562327 -59876153 + L2 LINE L2 3090 3270 -2 22 0 0 0 chr17 25562479 25562501 -59875979 + AT_rich Low_complexity Low_complexity 1 22 0 1734 181 0 0 chr17 25562501 25562788 -59875692 - AluJb SINE Alu -25 287 1 203 324 203 0 chr17 25565341 25565489 -59872991 - L2 LINE L2 -267 3005 2828 196 306 0 56 chr17 25565612 25565684 -59872796 - L2 LINE L2 0 3313 3246 2217 114 7 0 chr17 25566540 25566846 -59871634 + AluSx SINE Alu 1 308 -4 275 258 232 22 chr17 25566868 25567047 -59871433 + MIR SINE MIR 24 241 -21 631 255 66 52 chr17 25567190 25567402 -59871078 + MIR SINE MIR 17 231 -31 968 204 122 13 chr17 25567748 25567978 -59870502 - MIR SINE MIR -1 261 7 199 286 162 9 chr17 25568936 25569041 -59869439 + L2 LINE L2 3191 3311 -2 1241 148 0 30 chr17 25569235 25569422 -59869058 - AluJb SINE Alu 0 317 136 2303 79 0 0 chr17 25569422 25569725 -59868755 - AluY SINE Alu -8 303 1 1241 148 0 30 chr17 25569725 25569773 -59868707 - AluJb SINE Alu -181 136 88 767 312 17 8 chr17 25570732 25570969 -59867511 - MIR SINE MIR -12 250 12 286 340 122 0 chr17 25571479 25571626 -59866854 + MIR SINE MIR 90 254 -8 2142 100 17 0 chr17 25571732 25572021 -59866459 - AluSg SINE Alu -16 294 1 224 326 42 0 chr17 25572598 25572693 -59865787 - MIR SINE MIR -133 129 31 404 322 47 13 chr17 25572784 25572933 -59865547 + L3b LINE CR1 1306 1459 -124 261 246 87 24 chr17 25573034 25573160 -59865320 - HAL1 LINE L1 -1 2506 2373 568 274 0 20 chr17 25573181 25573334 -59865146 - L1MC4a LINE L1 -1843 5965 5816 582 237 59 89 chr17 25574464 25574700 -59863780 + MER102b DNA MER1_type 111 339 -2 204 200 18 36 chr17 25574723 25574778 -59863702 - MIR SINE MIR -125 137 84 258 176 0 0 chr17 25574790 25574841 -59863639 + T-rich Low_complexity Low_complexity 1 51 0 256 114 0 45 chr17 25575983 25576027 -59862453 - MIR SINE MIR -61 147 106 25 0 0 0 chr17 25576535 25576560 -59861920 + AT_rich Low_complexity Low_complexity 1 25 0 235 238 35 91 chr17 25576721 25576864 -59861616 - L1ME4a LINE L1 -46 6075 5941 405 87 43 14 chr17 25577191 25577260 -59861220 - MADE1 DNA Mariner -1 79 9 352 237 79 40 chr17 25577270 25577422 -59861058 - L1MC4a LINE L1 -460 5661 5504 2363 69 0 10 chr17 25578659 25578962 -59859518 + AluY SINE Alu 1 300 -11 504 220 16 25 chr17 25579199 25579382 -59859098 + MIR SINE MIR 14 241 -21 678 233 8 0 chr17 25579747 25579876 -59858604 - FLAM_A SINE Alu -2 131 2 712 94 0 72 chr17 25579883 25579942 -59858538 - L1MA7 LINE L1 0 6291 6229 1640 152 30 26 chr17 25579942 25580244 -59858236 - AluJo SINE Alu -9 303 1 712 94 0 72 chr17 25580244 25580322 -59858158 - L1MA7 LINE L1 -62 6229 6164 407 175 8 108 chr17 25580322 25580374 -59858106 + L1MA9 LINE L1 5925 5960 -352 2062 96 21 7 chr17 25580374 25580665 -59857815 + AluSq SINE Alu 1 295 -18 407 175 8 108 chr17 25580665 25580732 -59857748 + L1MA9 LINE L1 5960 6032 -280 369 0 0 0 chr17 25581677 25581718 -59856762 + (CA)n Simple_repeat Simple_repeat 2 42 0 1583 129 85 11 chr17 25582454 25582725 -59855755 - AluJb SINE Alu -21 291 1 1667 127 49 102 chr17 25582771 25583150 -59855330 - L1MB3 LINE L1 0 6183 5830 1505 113 32 0 chr17 25583150 25583371 -59855109 - AluJb SINE Alu 0 312 85 1667 127 49 102 chr17 25583371 25583441 -59855039 - L1MB3 LINE L1 -353 5830 5758 2349 60 3 0 chr17 25583460 25583758 -59854722 - AluY SINE Alu -12 299 1 375 285 59 38 chr17 25584015 25584201 -59854279 - MARNA DNA Mariner -353 233 44 785 130 0 0 chr17 25584562 25584677 -59853803 - AluSp/q SINE Alu -14 299 185 1653 89 0 13 chr17 25584677 25584902 -59853578 - AluSq SINE Alu -91 222 1 2112 137 0 6 chr17 25584910 25585224 -59853256 - AluSx SINE Alu 0 312 1 325 205 0 64 chr17 25586017 25586095 -59852385 + MIR SINE MIR 120 192 -70 749 212 53 0 chr17 25587412 25587563 -59850917 - MLT1H1 LTR MaLR -53 502 344 535 148 0 11 chr17 25587563 25587651 -59850829 - FLAM SINE Alu -19 124 38 515 244 222 60 chr17 25587701 25587776 -59850704 - MLT1H1 LTR MaLR -281 274 213 2139 105 0 3 chr17 25587776 25588072 -59850408 + AluSg SINE Alu 1 295 -15 515 244 222 60 chr17 25588072 25588230 -59850250 - MLT1H1 LTR MaLR -342 213 3 1609 163 10 38 chr17 25588254 25588567 -59849913 + AluJb SINE Alu 1 304 -8 501 279 13 19 chr17 25588614 25588772 -59849708 + MER69A DNA AcHobo 1 157 -20 26 0 0 0 chr17 25590125 25590151 -59848329 + AT_rich Low_complexity Low_complexity 1 26 0 289 318 0 0 chr17 25590540 25590625 -59847855 + MIR3 SINE MIR 118 202 -6 1222 189 25 13 chr17 25590796 25591034 -59847446 - AluJo SINE Alu -19 293 53 282 313 94 43 chr17 25591778 25592107 -59846373 + L1MEd LINE L1 49 394 -5725 614 308 111 39 chr17 25592108 25592799 -59845681 + L1MEd LINE L1 512 1252 -4867 799 189 0 0 chr17 25593110 25593308 -59845172 - FLAM_A SINE Alu 0 208 11 236 170 43 0 chr17 25594821 25594868 -59843612 + L1P3 LINE L1 5774 5822 -350 593 337 24 20 chr17 25595345 25595642 -59842838 - L2 LINE L2 -424 2890 2593 197 273 158 29 chr17 25596498 25596637 -59841843 + L3b LINE CR1 1295 1451 -132 370 280 217 23 chr17 25597235 25597410 -59841070 + MIR SINE MIR 29 237 -25 558 254 103 16 chr17 25597614 25597799 -59840681 + MIR SINE MIR 26 226 -36 2042 93 0 28 chr17 25597855 25598178 -59840302 + AluSx SINE Alu 1 315 0 1613 213 34 6 chr17 25598318 25598646 -59839834 - MER58B DNA MER1_type -1 340 4 211 366 128 24 chr17 25598652 25598816 -59839664 - L3b LINE CR1 -24 1559 1379 204 351 213 13 chr17 25598898 25599123 -59839357 - L3b LINE CR1 -202 1381 1112 203 146 24 0 chr17 25600975 25601016 -59837464 + GA-rich Low_complexity Low_complexity 3 44 0 712 185 15 22 chr17 25601264 25601399 -59837081 + AluJo SINE Alu 2 135 -177 1394 167 56 42 chr17 25601400 25601706 -59836774 + AluJo SINE Alu 2 311 -1 1719 131 69 0 chr17 25601710 25601985 -59836495 + AluSg SINE Alu 1 294 -16 385 208 69 20 chr17 25602650 25602778 -59835702 - MER20B DNA MER1_type -65 154 28 286 271 42 0 chr17 25602829 25602925 -59835555 - MIR SINE MIR -65 143 44 1512 195 0 42 chr17 25603410 25603723 -59834757 - AluJb SINE Alu -12 300 1 746 225 38 80 chr17 25604472 25604643 -59833837 + MIR SINE MIR 12 189 -73 569 101 13 0 chr17 25604643 25604722 -59833758 - MADE1 DNA Mariner 0 80 1 746 225 38 80 chr17 25604722 25604749 -59833731 + MIR SINE MIR 189 216 -46 1762 162 0 7 chr17 25604749 25605060 -59833420 + AluJb SINE Alu 1 309 0 746 225 38 80 chr17 25605060 25605121 -59833359 + MIR SINE MIR 216 262 0 2221 111 3 0 chr17 25607552 25607858 -59830622 + AluSq SINE Alu 1 307 -6 2165 110 0 0 chr17 25608819 25609118 -59829362 + AluSx SINE Alu 1 299 -13 283 272 24 64 chr17 25609157 25609282 -59829198 + MIR SINE MIR 82 201 -61 824 210 42 115 chr17 25609284 25609393 -59829087 - L2 LINE L2 0 3313 3198 3379 136 14 66 chr17 25609393 25609652 -59828828 + L1MB2 LINE L1 5572 5843 -328 1534 130 0 21 chr17 25609652 25609789 -59828691 + AluSx SINE Alu 1 132 -180 2302 87 3 0 chr17 25609789 25610087 -59828393 + AluSc SINE Alu 1 299 -10 1534 130 0 21 chr17 25610087 25610188 -59828292 + AluSx SINE Alu 132 234 -78 3379 136 14 66 chr17 25610188 25610210 -59828270 + L1MB2 LINE L1 5843 5865 -306 314 0 49 0 chr17 25610210 25610251 -59828229 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3379 136 14 66 chr17 25610251 25610601 -59827879 + L1MB2 LINE L1 5865 6171 0 2104 97 0 42 chr17 25610606 25610914 -59827566 - AluSx SINE Alu -17 295 1 824 210 42 115 chr17 25610914 25611155 -59827325 - L2 LINE L2 -119 3194 2983 234 336 81 20 chr17 25612591 25612740 -59825740 + L3b LINE CR1 1331 1488 -95 616 190 15 29 chr17 25613872 25614009 -59824471 + MER5B DNA MER1_type 7 141 -37 285 162 16 141 chr17 25614009 25614194 -59824286 + L1MC5 LINE L1 7549 7710 -251 863 226 0 18 chr17 25614194 25614362 -59824118 + FRAM SINE Alu 1 163 -13 2038 110 0 7 chr17 25614365 25614656 -59823824 + AluSc SINE Alu 1 289 -20 246 62 0 0 chr17 25614661 25614693 -59823787 + (TTTCC)n Simple_repeat Simple_repeat 4 35 0 1395 162 143 33 chr17 25614696 25614968 -59823512 - AluJb SINE Alu 0 302 1 329 243 81 44 chr17 25614973 25615109 -59823371 + L1MC5 LINE L1 7703 7843 -118 27 22 0 22 chr17 25615109 25615138 -59823342 + AT_rich Low_complexity Low_complexity 1 30 -14 2155 91 0 14 chr17 25615138 25615435 -59823045 + AluSx SINE Alu 1 293 -19 27 22 0 22 chr17 25615435 25615450 -59823030 + AT_rich Low_complexity Low_complexity 30 44 0 483 193 0 11 chr17 25615450 25615538 -59822942 - FLAM_A SINE Alu -19 123 37 2441 91 53 14 chr17 25615576 25615937 -59822543 - THE1C LTR MaLR 0 375 1 189 0 0 0 chr17 25617429 25617450 -59821030 + (A)n Simple_repeat Simple_repeat 1 21 0 1563 112 31 31 chr17 25618510 25618676 -59819804 - AluSx SINE Alu -9 303 135 2440 43 0 10 chr17 25618676 25618977 -59819503 - AluY SINE Alu -13 298 1 1563 112 31 31 chr17 25618977 25619070 -59819410 - AluSx SINE Alu -176 136 44 272 301 157 26 chr17 25619934 25620087 -59818393 + MIR SINE MIR 90 262 0 2202 89 0 13 chr17 25620092 25620394 -59818086 - AluSq SINE Alu -15 298 1 314 219 27 0 chr17 25621028 25621101 -59817379 - MIR SINE MIR -111 151 77 298 340 94 0 chr17 25621258 25621470 -59817010 + L3b LINE CR1 1161 1392 -191 193 353 58 14 chr17 25622372 25622511 -59815969 + L2 LINE L2 2915 3059 -213 225 260 180 70 chr17 25622718 25622818 -59815662 + L2 LINE L2 3203 3313 0 207 0 0 0 chr17 25623053 25623076 -59815404 + (T)n Simple_repeat Simple_repeat 1 23 0 1967 129 3 10 chr17 25623094 25623388 -59815092 + AluSx SINE Alu 1 292 -20 279 183 37 0 chr17 25623924 25624006 -59814474 + GA-rich Low_complexity Low_complexity 2 86 0 339 342 106 12 chr17 25625986 25626147 -59812333 - MER5A DNA MER1_type 0 189 14 296 258 129 41 chr17 25626954 25627126 -59811354 - MIR SINE MIR -9 253 58 189 0 0 0 chr17 25627186 25627207 -59811273 + (A)n Simple_repeat Simple_repeat 1 21 0 2157 87 3 7 chr17 25628877 25629166 -59809314 - AluSx SINE Alu -24 288 1 553 358 25 12 chr17 25630115 25630358 -59808122 + MIR SINE MIR 13 258 -4 243 0 0 0 chr17 25634383 25634410 -59804070 + (CA)n Simple_repeat Simple_repeat 1 27 0 185 159 23 0 chr17 25635031 25635075 -59803405 + (TG)n Simple_repeat Simple_repeat 1 45 0 388 306 98 6 chr17 25638043 25638216 -59800264 + MIR SINE MIR 28 216 -46 329 250 134 9 chr17 25638788 25638900 -59799580 + MIR SINE MIR 66 191 -71 2406 43 10 3 chr17 25638901 25639204 -59799276 - AluY SINE Alu -6 305 1 1946 130 0 27 chr17 25639612 25639911 -59798569 + AluJb SINE Alu 7 297 -15 1999 72 47 11 chr17 25640017 25640296 -59798184 + AluSc SINE Alu 17 305 -4 238 368 0 28 chr17 25640298 25640442 -59798038 + GA-rich Low_complexity Low_complexity 3 142 0 1832 149 10 10 chr17 25651848 25652150 -59786330 - AluJo SINE Alu -10 302 1 1975 148 0 3 chr17 25652156 25652459 -59786021 - AluSx SINE Alu -10 302 1 218 278 40 33 chr17 25653326 25653477 -59785003 + (CAGAGA)n Simple_repeat Simple_repeat 6 157 0 226 341 12 0 chr17 25654627 25654709 -59783771 - L2 LINE L2 -14 3258 3176 1076 360 163 22 chr17 25654793 25655751 -59782729 - L2 LINE L2 -249 3023 2202 2395 69 26 0 chr17 25655751 25656054 -59782426 + AluY SINE Alu 1 311 0 1076 360 163 22 chr17 25656054 25657101 -59781379 - L2 LINE L2 -1070 2202 739 180 310 14 42 chr17 25658268 25658339 -59780141 + L3 LINE CR1 1398 1466 -111 216 0 0 0 chr17 25658456 25658480 -59780000 + (A)n Simple_repeat Simple_repeat 1 24 0 2014 123 10 7 chr17 25658487 25658787 -59779693 + AluSx SINE Alu 1 301 -11 598 258 91 5 chr17 25658795 25659014 -59779466 + MIR SINE MIR 6 248 -14 440 264 72 30 chr17 25659280 25659447 -59779033 - MIR3 SINE MIR -4 204 31 644 112 28 0 chr17 25660055 25660162 -59778318 + MIR SINE MIR 29 138 -124 620 243 28 44 chr17 25661793 25661974 -59776506 + L2 LINE L2 3127 3304 -9 458 326 9 27 chr17 25663235 25663456 -59775024 - MER102a DNA MER1_type -12 318 102 511 325 64 29 chr17 25665019 25665390 -59773090 - L3 LINE CR1 -25 1552 1123 285 274 57 19 chr17 25669876 25669982 -59768498 + MIR SINE MIR 20 129 -133 299 273 52 0 chr17 25670107 25670184 -59768296 + L2 LINE L2 3171 3251 -21 2241 110 0 13 chr17 25670519 25670829 -59767651 - AluSx SINE Alu -6 306 1 1114 152 0 22 chr17 25670833 25671011 -59767469 - AluJb SINE Alu -7 305 132 2405 71 0 0 chr17 25674732 25675027 -59763453 + AluY SINE Alu 1 295 -16 236 188 0 21 chr17 25677261 25677309 -59761171 + G-rich Low_complexity Low_complexity 6 52 0 189 286 86 0 chr17 25678015 25678085 -59760395 - MIR SINE MIR -8 254 179 392 210 228 0 chr17 25678108 25678270 -59760210 + MER46C DNA MER2_type 13 211 -127 1939 156 6 16 chr17 25680980 25681294 -59757186 + AluJb SINE Alu 1 311 -1 270 254 0 15 chr17 25681318 25681385 -59757095 - MIR SINE MIR 0 262 197 24 0 0 0 chr17 25681393 25681417 -59757063 + AT_rich Low_complexity Low_complexity 1 24 0 486 0 0 0 chr17 25681440 25681494 -59756986 + (CA)n Simple_repeat Simple_repeat 1 54 0 306 180 0 0 chr17 25682259 25682320 -59756160 + (CA)n Simple_repeat Simple_repeat 2 62 0 1884 113 68 3 chr17 25685057 25685349 -59753131 - AluSx SINE Alu -1 311 1 391 268 107 0 chr17 25685353 25685465 -59753015 + MIR3 SINE MIR 81 204 -4 2243 85 0 0 chr17 25685486 25685789 -59752691 - AluSp SINE Alu 0 303 1 2219 88 0 23 chr17 25686060 25686368 -59752112 - AluY SINE Alu -10 301 1 869 121 0 104 chr17 25686790 25686912 -59751568 + L1MA1 LINE L1 6148 6281 -21 1899 151 0 10 chr17 25686912 25687217 -59751263 + AluJb SINE Alu 1 302 -10 222 37 0 0 chr17 25687217 25687244 -59751236 + (TA)n Simple_repeat Simple_repeat 2 28 0 869 121 0 104 chr17 25687244 25687293 -59751187 + L1MA1 LINE L1 6279 6302 0 553 272 60 65 chr17 25687466 25687698 -59750782 - MIR SINE MIR -9 253 23 384 302 231 0 chr17 25687959 25688128 -59750352 - MIR SINE MIR -7 255 48 427 350 36 51 chr17 25688451 25688813 -59749667 + L1MB7 LINE L1 5573 5945 -239 853 273 21 34 chr17 25689522 25689760 -59748720 - MIR SINE MIR 0 262 28 189 107 0 0 chr17 25691760 25691788 -59746692 + (CA)n Simple_repeat Simple_repeat 2 29 0 739 153 5 138 chr17 25692773 25692905 -59745575 - MER5B DNA MER1_type 0 178 81 2394 38 41 0 chr17 25692905 25693197 -59745283 - AluY SINE Alu -7 304 1 739 153 5 138 chr17 25693197 25693267 -59745213 - MER5B DNA MER1_type -97 81 3 204 40 0 0 chr17 25693316 25693341 -59745139 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 225 325 142 17 chr17 25693343 25693463 -59745017 + MIR SINE MIR 78 212 -50 969 202 34 0 chr17 25693463 25693641 -59744839 + MER5A DNA MER1_type 4 187 -2 687 259 30 51 chr17 25693660 25693776 -59744704 + MIR SINE MIR 1 111 -151 1800 144 7 3 chr17 25693776 25694074 -59744406 - AluSx SINE Alu -13 299 1 687 259 30 51 chr17 25694074 25694193 -59744287 + MIR SINE MIR 111 231 -31 1374 187 0 32 chr17 25694230 25694508 -59743972 - AluJo SINE Alu -43 269 1 532 351 61 9 chr17 25695445 25695676 -59742804 + MIR SINE MIR 20 262 0 23 0 0 0 chr17 25695960 25695983 -59742497 + AT_rich Low_complexity Low_complexity 1 23 0 292 274 44 35 chr17 25696504 25696617 -59741863 + L2 LINE L2 3165 3278 -35 2402 71 0 0 chr17 25696946 25697228 -59741252 + AluSx SINE Alu 4 285 -27 222 0 0 33 chr17 25697228 25697258 -59741222 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 592 294 231 17 chr17 25697391 25697863 -59740617 + MLT1K LTR MaLR 2 574 -14 334 274 51 17 chr17 25697997 25698114 -59740366 - MIR SINE MIR -130 132 12 2043 151 0 16 chr17 25698202 25698514 -59739966 + AluJb SINE Alu 1 307 -5 1588 145 76 38 chr17 25698587 25698876 -59739604 + AluJo SINE Alu 1 300 -12 217 221 253 0 chr17 25699140 25699235 -59739245 + L2 LINE L2 1692 1810 -1504 315 0 0 0 chr17 25699550 25699585 -59738895 + (TG)n Simple_repeat Simple_repeat 2 36 0 390 239 11 0 chr17 25700198 25700286 -59738194 + L2 LINE L2 3225 3313 0 292 311 28 0 chr17 25700938 25701044 -59737436 + L3b LINE CR1 1290 1398 -185 262 203 125 0 chr17 25701570 25701591 -59736889 + MER3 DNA MER1_type 19 47 -162 296 211 0 0 chr17 25701591 25701643 -59736837 - MER3 DNA MER1_type 0 209 158 392 209 0 0 chr17 25701646 25701713 -59736767 + AluJ/FLAM SINE Alu 1 67 -235 1103 122 117 46 chr17 25702011 25702208 -59736272 + AluJo SINE Alu 80 290 -22 1799 176 24 0 chr17 25703691 25703981 -59734499 - AluJo SINE Alu -15 297 1 1040 183 4 74 chr17 25704010 25704082 -59734398 - MIR SINE MIR -38 224 149 1847 146 9 72 chr17 25704082 25704403 -59734077 - AluJb SINE Alu -5 307 7 1040 183 4 74 chr17 25704403 25704559 -59733921 - MIR SINE MIR -113 149 12 261 139 0 0 chr17 25705068 25705111 -59733369 + (TG)n Simple_repeat Simple_repeat 1 43 0 224 298 133 43 chr17 25707624 25707879 -59730601 - L2 LINE L2 -84 3188 2911 212 321 25 0 chr17 25708218 25708299 -59730181 - L3b LINE CR1 -224 1359 1277 642 252 48 29 chr17 25708477 25708683 -59729797 + MIR SINE MIR 32 241 -21 1947 152 0 39 chr17 25708751 25709060 -59729420 - AluJb SINE Alu -15 297 1 319 55 41 27 chr17 25710426 25710499 -59727981 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 222 302 132 64 chr17 25711321 25711556 -59726924 + L2 LINE L2 3017 3267 -5 200 216 352 11 chr17 25711560 25711648 -59726832 - MIR SINE MIR -134 128 11 1832 121 69 17 chr17 25711902 25712039 -59726441 + AluJb SINE Alu 1 129 -183 2512 88 0 0 chr17 25712039 25712345 -59726135 + AluSq SINE Alu 1 306 -7 1832 121 69 17 chr17 25712345 25712496 -59725984 + AluJb SINE Alu 129 304 -8 338 329 128 14 chr17 25713068 25713421 -59725059 + L2 LINE L2 2556 2948 -366 233 309 173 0 chr17 25713599 25713709 -59724771 + L2 LINE L2 3182 3310 -3 2403 98 0 3 chr17 25714852 25715157 -59723323 - AluSp SINE Alu -9 304 1 211 321 0 0 chr17 25715225 25715281 -59723199 + L2 LINE L2 3253 3308 -5 476 258 120 0 chr17 25715941 25716108 -59722372 + L2 LINE L2 2684 2870 -444 180 176 0 0 chr17 25717829 25717863 -59720617 + CT-rich Low_complexity Low_complexity 1 34 0 491 246 22 7 chr17 25718078 25718216 -59720264 - MIR SINE MIR -15 247 108 1787 158 42 3 chr17 25718396 25718681 -59719799 + AluJo SINE Alu 1 296 -16 660 311 25 0 chr17 25718842 25719038 -59719442 - MIR SINE MIR -6 256 56 557 161 0 11 chr17 25719782 25719869 -59718611 + AluS SINE Alu 2 87 -226 1616 103 0 0 chr17 25719869 25720072 -59718408 + AluSx SINE Alu 16 218 -94 2062 62 0 4 chr17 25720072 25720316 -59718164 - AluY SINE Alu -68 243 1 329 248 262 14 chr17 25720964 25721105 -59717375 + MIR3 SINE MIR 19 194 -14 1050 194 159 29 chr17 25721793 25722133 -59716347 + L1ME2 LINE L1 5746 6129 -35 2033 85 42 18 chr17 25722134 25722417 -59716063 + AluSc SINE Alu 1 290 -19 1905 179 10 3 chr17 25722579 25722886 -59715594 + AluJb SINE Alu 1 309 -3 2276 102 30 7 chr17 25723158 25723463 -59715017 + AluSx SINE Alu 1 312 0 528 242 74 13 chr17 25723474 25723623 -59714857 + MIR SINE MIR 78 235 -27 569 269 118 60 chr17 25723819 25724027 -59714453 + L1MC4a LINE L1 5333 5527 -2281 474 45 0 148 chr17 25724027 25724065 -59714415 + MADE1 DNA Mariner 2 44 -36 2476 61 10 0 chr17 25724065 25724358 -59714122 - AluSp SINE Alu -17 296 1 2482 48 7 0 chr17 25724359 25724652 -59713828 - AluY SINE Alu -16 295 1 474 45 0 148 chr17 25724652 25724699 -59713781 + MADE1 DNA Mariner 43 76 -4 569 269 118 60 chr17 25724699 25724747 -59713733 + L1MC4a LINE L1 5527 5571 -2237 1642 186 7 10 chr17 25724747 25725038 -59713442 - AluJo SINE Alu -21 291 2 569 269 118 60 chr17 25725038 25725190 -59713290 + L1MC4a LINE L1 5571 5713 -2095 1554 178 25 14 chr17 25725190 25725500 -59712980 + AluJo SINE Alu 1 313 0 2192 100 10 10 chr17 25725500 25725791 -59712689 + AluSx SINE Alu 2 292 -20 569 269 118 60 chr17 25725791 25725928 -59712552 + L1MC4a LINE L1 5712 5914 -1894 23 33 0 0 chr17 25726071 25726101 -59712379 + AT_rich Low_complexity Low_complexity 1 30 0 707 171 17 0 chr17 25726101 25726218 -59712262 - AluSq/x SINE Alu -192 121 3 2043 145 10 6 chr17 25726319 25726630 -59711850 - AluJb SINE Alu 0 312 1 31 76 0 0 chr17 25726638 25726704 -59711776 + AT_rich Low_complexity Low_complexity 1 66 0 2407 62 0 3 chr17 25726744 25727032 -59711448 + AluSg1 SINE Alu 1 287 -22 21 36 0 0 chr17 25727802 25727830 -59710650 + GC_rich Low_complexity Low_complexity 1 28 0 203 325 0 25 chr17 25728002 25728082 -59710398 + MIR SINE MIR 61 138 -70 274 224 38 0 chr17 25728152 25728233 -59710247 + MIR SINE MIR 40 124 -84 202 137 0 59 chr17 25731177 25731228 -59707252 + (CCCG)n Simple_repeat Simple_repeat 2 49 0 186 250 192 58 chr17 25732497 25732617 -59705863 - L2 LINE L2 -4 3268 3133 2180 133 3 3 chr17 25732738 25733040 -59705440 + AluSx SINE Alu 1 302 -10 207 280 0 53 chr17 25733106 25733181 -59705299 - MIR SINE MIR -46 216 146 * 728 212 15 56 chr17 25733178 25733376 -59705104 + MIR SINE MIR 5 194 -68 1846 192 22 23 chr17 25733376 25733915 -59704565 + L1M4 LINE L1 4896 5429 -746 1060 68 0 15 chr17 25733915 25734047 -59704433 + AluYb8 SINE Alu 1 130 -188 6212 132 13 26 chr17 25734063 25734234 -59704246 + L1MC1 LINE L1 5254 5426 -907 2334 101 0 3 chr17 25734234 25734542 -59703938 + AluSc SINE Alu 1 307 -2 6212 132 13 26 chr17 25734542 25735450 -59703030 + L1MC1 LINE L1 5426 6319 -14 2192 134 0 0 chr17 25735452 25735751 -59702729 - AluSx SINE Alu -13 299 1 236 280 93 0 chr17 25735765 25735840 -59702640 + MIR SINE MIR 175 256 -6 317 298 81 8 chr17 25735843 25735967 -59702513 - MIR SINE MIR -110 152 20 2429 78 3 3 chr17 25736010 25736303 -59702177 - AluSq SINE Alu -12 301 9 612 262 30 20 chr17 25736709 25736911 -59701569 - MIR SINE MIR 0 262 59 611 271 6 18 chr17 25737009 25737070 -59701410 + MIR SINE MIR 95 155 -107 2290 57 3 44 chr17 25737070 25737391 -59701089 + AluY SINE Alu 1 309 0 611 271 6 18 chr17 25737391 25737498 -59700982 + MIR SINE MIR 155 262 0 413 276 55 16 chr17 25737498 25737625 -59700855 + MIR SINE MIR 106 237 -25 1359 164 57 166 chr17 25737950 25738137 -59700343 - L1MC5 LINE L1 -57 7904 7698 2351 93 20 0 chr17 25738137 25738438 -59700042 + AluY SINE Alu 1 307 -4 1359 164 57 166 chr17 25738438 25738459 -59700021 - L1MC5 LINE L1 -263 7698 7676 1861 139 13 58 chr17 25738459 25738769 -59699711 + AluSx SINE Alu 1 296 -16 1924 146 16 25 chr17 25738769 25739084 -59699396 + AluSx SINE Alu 1 312 0 1359 164 57 166 chr17 25739084 25739140 -59699340 - L1MC5 LINE L1 -284 7677 7616 1778 154 0 18 chr17 25739140 25739420 -59699060 - AluJb SINE Alu -32 280 6 1359 164 57 166 chr17 25739420 25739482 -59698998 - L1MC5 LINE L1 -345 7616 7549 2583 61 3 0 chr17 25739482 25739777 -59698703 - AluSp SINE Alu -17 296 1 1359 164 57 166 chr17 25739777 25740149 -59698331 - L1MC5 LINE L1 -412 7549 7279 398 268 60 56 chr17 25740219 25740469 -59698011 + L1PB3 LINE L1 5713 5963 -191 * 2062 144 20 18 chr17 25740251 25740646 -59697834 + L1MB4 LINE L1 5746 6141 -39 634 120 0 0 chr17 25740702 25740802 -59697678 + FRAM SINE Alu 67 166 -10 230 105 0 0 chr17 25740802 25740840 -59697640 + L1MB4 LINE L1 6141 6178 -2 327 314 77 12 chr17 25741107 25741276 -59697204 + MIR SINE MIR 32 211 -51 1484 135 54 0 chr17 25741333 25741555 -59696925 + AluJb SINE Alu 61 294 -18 528 175 87 0 chr17 25741664 25741767 -59696713 + MER81 DNA DNA 1 112 -2 642 339 119 24 chr17 25741870 25742283 -59696197 + L2 LINE L2 2069 2564 -750 2076 137 27 0 chr17 25742283 25742575 -59695905 + AluSx SINE Alu 1 300 -12 642 339 119 24 chr17 25742575 25742790 -59695690 + L2 LINE L2 2564 2757 -557 825 160 90 0 chr17 25742801 25742957 -59695523 - MER58B DNA MER1_type 0 341 172 1067 188 0 0 chr17 25742959 25743135 -59695345 + AluSg/x SINE Alu 136 311 -1 2134 146 0 0 chr17 25743233 25743535 -59694945 - AluJb SINE Alu -9 303 2 299 389 13 13 chr17 25743624 25743773 -59694707 + L2 LINE L2 2932 3080 -192 725 244 56 9 chr17 25743944 25744157 -59694323 - MIR SINE MIR -38 224 2 404 264 63 57 chr17 25744427 25744586 -59693894 - MIR SINE MIR -74 188 29 950 133 7 0 chr17 25744810 25744945 -59693535 + AluJb SINE Alu 1 136 -176 2309 114 7 0 chr17 25744951 25745259 -59693221 + AluSp SINE Alu 1 310 -3 257 180 0 16 chr17 25745259 25745320 -59693160 + GA-rich Low_complexity Low_complexity 1 60 0 652 293 38 19 chr17 25745596 25745862 -59692618 - L1ME3A LINE L1 -318 5852 5582 2222 116 3 0 chr17 25745870 25746164 -59692316 - AluSx SINE Alu -14 298 4 185 368 16 40 chr17 25746216 25746341 -59692139 + L3b LINE CR1 1326 1447 -136 539 276 40 17 chr17 25746793 25746966 -59691514 - MIR SINE MIR -52 210 34 964 228 51 34 chr17 25747477 25747714 -59690766 - MIR SINE MIR -21 241 1 1007 171 6 0 chr17 25749452 25749627 -59688853 - AluJo SINE Alu -5 307 132 1798 121 3 37 chr17 25749640 25749937 -59688543 + AluSx SINE Alu 2 288 -24 261 0 0 0 chr17 25749939 25749968 -59688512 + (TG)n Simple_repeat Simple_repeat 2 30 0 527 31 119 0 chr17 25749970 25750130 -59688350 + (TA)n Simple_repeat Simple_repeat 2 180 0 813 134 0 37 chr17 25750146 25750280 -59688200 - AluJo SINE Alu -183 129 1 255 311 113 26 chr17 25750416 25750567 -59687913 + L2 LINE L2 1990 2153 -1161 2076 121 0 7 chr17 25750639 25750944 -59687536 + AluSx SINE Alu 1 303 -9 918 252 19 0 chr17 25750972 25751182 -59687298 + MIR SINE MIR 49 262 0 398 353 93 7 chr17 25751182 25751471 -59687009 + L2 LINE L2 2364 2677 -637 1183 105 6 0 chr17 25751490 25751652 -59686828 - AluSg/x SINE Alu -16 296 134 1798 154 3 0 chr17 25751716 25752040 -59686440 + AluJb SINE Alu 1 325 0 208 327 117 24 chr17 25752043 25752343 -59686137 + L2 LINE L2 2739 3061 -211 193 339 16 0 chr17 25752449 25752511 -59685969 + L2 LINE L2 3139 3201 -71 1703 144 10 44 chr17 25755531 25755829 -59682651 - AluJb SINE Alu -24 288 1 202 219 0 0 chr17 25755872 25755913 -59682567 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 603 200 17 17 chr17 25756604 25756724 -59681756 + MIR SINE MIR 28 147 -115 1090 160 33 74 chr17 25756790 25756992 -59681488 + L1MB4 LINE L1 5944 6138 -42 2190 95 0 0 chr17 25756992 25757296 -59681184 - AluSx SINE Alu 0 304 1 1090 160 33 74 chr17 25757296 25757335 -59681145 + L1MB4 LINE L1 6138 6177 -3 2024 125 7 0 chr17 25757345 25757640 -59680840 + AluSx SINE Alu 1 297 -15 2320 97 0 0 chr17 25757641 25757949 -59680531 + AluSx SINE Alu 1 308 -4 186 196 0 98 chr17 25757998 25758049 -59680431 + MIR SINE MIR 217 262 0 1811 135 46 16 chr17 25758267 25758570 -59679910 - AluJb SINE Alu 0 312 1 896 223 28 51 chr17 25759066 25759281 -59679199 - MER20 DNA MER1_type -9 210 1 2172 105 0 0 chr17 25759368 25759664 -59678816 + AluSx SINE Alu 1 296 -16 2907 48 0 0 chr17 25759665 25760018 -59678462 + L1PA8 LINE L1 5820 6172 0 1158 134 27 103 chr17 25760505 25760649 -59677831 + MER96B DNA MER1_type? 177 294 -123 749 190 0 0 chr17 25760649 25760770 -59677710 + FLAM_A SINE Alu 1 121 -12 1158 134 27 103 chr17 25760770 25760886 -59677594 + MER96B DNA MER1_type? 294 417 0 611 298 78 16 chr17 25760939 25761184 -59677296 + Charlie8 DNA MER1_type 19 278 -2139 3643 186 65 17 chr17 25761224 25761613 -59676867 - MER63C DNA MER1_type -130 930 561 2206 99 3 0 chr17 25761613 25761915 -59676565 + AluSp SINE Alu 1 303 -10 3643 186 65 17 chr17 25761915 25762305 -59676175 - MER63C DNA MER1_type -499 561 113 237 260 0 14 chr17 25762309 25762403 -59676077 - MIR3 SINE MIR -113 149 12 274 240 107 0 chr17 25763210 25763285 -59675195 + MIR SINE MIR 44 126 -82 656 264 111 21 chr17 25763294 25763529 -59674951 - MIR SINE MIR -6 256 1 946 181 0 0 chr17 25763771 25763937 -59674543 - FRAM SINE Alu -11 165 1 1379 201 37 0 chr17 25764441 25764710 -59673770 + AluJb SINE Alu 4 282 -30 543 241 63 68 chr17 25764826 25764898 -59673582 - MIR SINE MIR 0 262 191 2147 91 13 10 chr17 25764898 25765207 -59673273 - AluSx SINE Alu -2 310 1 543 241 63 68 chr17 25765207 25765325 -59673155 - MIR SINE MIR -71 191 73 258 175 0 35 chr17 25765884 25765941 -59672539 + MIR SINE MIR 72 126 -82 599 277 36 15 chr17 25766020 25766215 -59672265 + MLT1J LTR MaLR 1 199 -312 * 1503 246 46 35 chr17 25766209 25766603 -59671877 - MLT1H1 LTR MaLR -99 456 59 396 0 0 0 chr17 25766618 25766662 -59671818 + (CA)n Simple_repeat Simple_repeat 2 45 0 271 150 0 0 chr17 25766765 25766805 -59671675 - MLT1H1 LTR MaLR -530 60 21 1610 171 3 7 chr17 25766806 25767099 -59671381 + AluJo SINE Alu 2 293 -19 438 286 16 0 chr17 25767116 25767242 -59671238 + MLT1J LTR MaLR 384 511 0 182 359 0 0 chr17 25767513 25767566 -59670914 + L2 LINE L2 3176 3228 -44 297 349 50 25 chr17 25767736 25767974 -59670506 - L2 LINE L2 -785 2529 2286 283 302 67 62 chr17 25768077 25768256 -59670224 + MIR3 SINE MIR 17 196 -12 303 28 0 0 chr17 25768335 25768371 -59670109 + (CAA)n Simple_repeat Simple_repeat 2 37 0 215 253 173 0 chr17 25768635 25768710 -59669770 - L2 LINE L2 -17 3255 3168 255 31 0 0 chr17 25768794 25768826 -59669654 + (TG)n Simple_repeat Simple_repeat 2 33 0 1933 136 0 16 chr17 25768860 25769169 -59669311 - AluSx SINE Alu -8 304 1 1687 171 0 10 chr17 25769170 25769469 -59669011 - AluJo SINE Alu -16 296 1 456 226 0 0 chr17 25769481 25769565 -59668915 - MIR3 SINE MIR -11 197 114 808 151 0 22 chr17 25769568 25769707 -59668773 + AluJo SINE Alu 1 136 -176 2335 57 0 0 chr17 25769707 25770032 -59668448 + AluY SINE Alu 1 325 0 441 262 78 0 chr17 25770065 25770206 -59668274 - MIR SINE MIR -36 226 75 388 311 43 24 chr17 25770241 25770405 -59668075 - MER5A DNA MER1_type -16 173 7 486 267 203 0 chr17 25770944 25771131 -59667349 + MIR SINE MIR 29 253 -9 2407 60 0 0 chr17 25771243 25771542 -59666938 + AluSp SINE Alu 1 299 -14 1506 178 57 4 chr17 25771562 25771843 -59666637 + AluJo SINE Alu 1 296 -6 1861 230 82 83 chr17 25771899 25772166 -59666314 + L1ME3A LINE L1 5508 5774 -396 2122 110 3 0 chr17 25772166 25772467 -59666013 - AluSq SINE Alu -11 302 1 1861 230 82 83 chr17 25772467 25772479 -59666001 + L1ME3A LINE L1 5774 5785 -385 1886 125 11 0 chr17 25772479 25772818 -59665662 - AluSq SINE Alu 0 342 1 1861 230 82 83 chr17 25772818 25773198 -59665282 + L1ME3A LINE L1 5785 6168 -2 730 190 0 29 chr17 25773840 25773977 -59664503 + AluJo/FLAM SINE Alu 1 133 -169 2165 113 0 0 chr17 25773979 25774271 -59664209 - AluSc SINE Alu -17 292 1 1930 123 10 10 chr17 25774272 25774573 -59663907 - AluSx SINE Alu -11 301 1 1860 114 114 0 chr17 25774632 25774912 -59663568 + AluSx SINE Alu 1 312 0 2389 74 0 0 chr17 25775002 25775313 -59663167 - AluY SINE Alu 0 311 1 852 204 6 44 chr17 25775412 25775450 -59663030 - AluJo/FRAM SINE Alu -5 307 269 1759 146 6 44 chr17 25775450 25775585 -59662895 + AluJb SINE Alu 2 141 -171 2653 23 0 0 chr17 25775585 25775888 -59662592 + AluY SINE Alu 1 303 -8 1759 146 6 44 chr17 25775888 25776068 -59662412 + AluJb SINE Alu 141 305 -7 852 204 6 44 chr17 25776068 25776210 -59662270 - AluJo/FRAM SINE Alu -43 269 134 710 292 94 26 chr17 25776222 25776818 -59661662 + L1MEd LINE L1 967 1688 -802 780 183 8 0 chr17 25777171 25777302 -59661178 + AluJo/FLAM SINE Alu 1 132 -170 2112 112 0 10 chr17 25777303 25777615 -59660865 + AluSx SINE Alu 4 312 0 258 243 81 54 chr17 25777706 25777817 -59660663 + L1ME LINE L1 5772 5885 -285 2218 92 0 7 chr17 25777828 25778122 -59660358 - AluY SINE Alu -19 292 1 2156 102 3 3 chr17 25778172 25778467 -59660013 - AluSx SINE Alu -17 295 1 269 26 26 0 chr17 25778476 25778514 -59659966 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2148 92 3 0 chr17 25778516 25778799 -59659681 - AluSx SINE Alu -24 288 5 1642 141 6 73 chr17 25778830 25779157 -59659323 + AluJb SINE Alu 1 305 -7 447 263 73 60 chr17 25779241 25779389 -59659091 + MLT1L LTR MaLR 381 535 -80 2302 54 3 17 chr17 25779389 25779687 -59658793 - AluY SINE Alu -16 295 2 447 263 73 60 chr17 25779687 25779770 -59658710 + MLT1L LTR MaLR 535 615 0 415 290 81 64 chr17 25779771 25780054 -59658426 - L2 LINE L2 -746 2568 2281 1645 199 75 55 chr17 25780054 25780237 -59658243 + MLT1C LTR MaLR 6 184 -283 2165 123 0 0 chr17 25780237 25780547 -59657933 + AluSx SINE Alu 1 310 -2 1645 199 75 55 chr17 25780547 25780816 -59657664 + MLT1C LTR MaLR 184 467 0 739 314 80 59 chr17 25780816 25781463 -59657017 - L2 LINE L2 -1047 2267 1607 1369 167 129 20 chr17 25781530 25781824 -59656656 + L1MC3 LINE L1 7106 7431 -354 1544 155 38 24 chr17 25781824 25781944 -59656536 + AluJo SINE Alu 1 118 -194 2047 129 3 0 chr17 25781944 25782255 -59656225 + AluSx SINE Alu 1 312 0 1544 155 38 24 chr17 25782255 25782425 -59656055 + AluJo SINE Alu 118 295 -17 2266 60 0 0 chr17 25782427 25782749 -59655731 + AluY SINE Alu 1 322 0 1730 153 197 60 chr17 25782771 25783151 -59655329 + MLT1D LTR MaLR 1 444 -61 2048 114 0 3 chr17 25783151 25783465 -59655015 - AluSx SINE Alu 0 312 1 1730 153 197 60 chr17 25783465 25783501 -59654979 + MLT1D LTR MaLR 444 474 -31 1082 129 0 28 chr17 25783501 25783672 -59654808 - AluJb SINE Alu -11 301 134 1472 191 3 46 chr17 25783672 25783765 -59654715 - AluJo SINE Alu -2 310 215 2344 83 0 0 chr17 25783765 25784065 -59654415 - AluSg SINE Alu -10 300 1 1472 191 3 46 chr17 25784065 25784295 -59654185 - AluJo SINE Alu -97 215 1 2399 118 8 0 chr17 25784316 25784673 -59653807 - L1PB3 LINE L1 -1 6153 5794 2164 112 0 10 chr17 25784673 25784987 -59653493 + AluSx SINE Alu 1 311 -1 634 52 0 0 chr17 25784987 25785064 -59653416 - L1P5 LINE L1 -564 5590 5514 229 135 0 0 chr17 25785064 25785101 -59653379 + MLT1D LTR MaLR 467 503 -2 1771 269 82 23 chr17 25785102 25785148 -59653332 + HAL1 LINE L1 1109 1151 -1356 2019 114 6 19 chr17 25785148 25785463 -59653017 + AluJb SINE Alu 1 311 -1 1771 269 82 23 chr17 25785463 25785796 -59652684 + HAL1 LINE L1 1151 1463 -1044 2301 71 10 0 chr17 25785796 25786091 -59652389 + AluSp SINE Alu 1 298 -15 1771 269 82 23 chr17 25786091 25786454 -59652026 + HAL1 LINE L1 1463 1896 -611 1236 165 0 0 chr17 25786454 25786648 -59651832 + AluJb SINE Alu 1 194 -118 1536 65 0 15 chr17 25786745 25786944 -59651536 - L1PA5 LINE L1 -3 6151 5956 493 227 77 49 chr17 25786967 25787187 -59651293 + HAL1 LINE L1 2011 2223 -284 2336 81 0 10 chr17 25787187 25787497 -59650983 - AluSp SINE Alu -6 307 1 1941 137 3 10 chr17 25787498 25787804 -59650676 - AluJb SINE Alu -8 304 1 493 227 77 49 chr17 25787804 25787912 -59650568 + HAL1 LINE L1 2222 2400 -107 2251 102 0 10 chr17 25787940 25788253 -59650227 + AluSq SINE Alu 1 310 -3 1794 171 3 3 chr17 25788669 25788973 -59649507 + AluJo SINE Alu 1 304 -8 2031 108 7 3 chr17 25789046 25789342 -59649138 - AluSx SINE Alu -3 309 13 2247 61 44 3 chr17 25790049 25790346 -59648134 + AluY SINE Alu 2 310 -1 1891 138 0 3 chr17 25790552 25790842 -59647638 + AluSx SINE Alu 11 299 -13 2277 97 7 0 chr17 25790844 25791154 -59647326 + AluSx SINE Alu 1 312 0 438 309 38 29 chr17 25791352 25791562 -59646918 + MIR SINE MIR 5 216 -46 245 280 40 64 chr17 25791617 25791742 -59646738 - L2 LINE L2 -206 3066 2945 693 212 54 27 chr17 25791749 25791933 -59646547 - MER53 DNA DNA 0 189 1 365 268 210 7 chr17 25793213 25793351 -59645129 + MIR SINE MIR 97 262 0 270 0 0 0 chr17 25793978 25794008 -59644472 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 1892 164 0 3 chr17 25794066 25794377 -59644103 + AluJb SINE Alu 1 310 -2 280 284 0 14 chr17 25794396 25794470 -59644010 - L2 LINE L2 -73 3240 3168 1439 118 45 5 chr17 25795009 25795230 -59643250 - MER30 DNA MER1_type 0 230 1 2511 51 0 10 chr17 25795398 25795710 -59642770 - AluY SINE Alu -1 310 2 251 288 100 12 chr17 25795795 25795875 -59642605 - MIR SINE MIR -85 123 37 2207 93 3 7 chr17 25796110 25796410 -59642070 + AluSq SINE Alu 1 299 -14 458 268 34 121 chr17 25796930 25797195 -59641285 + MIR SINE MIR 21 262 0 241 211 70 0 chr17 25798256 25798327 -59640153 + CT-rich Low_complexity Low_complexity 3 78 0 720 188 8 8 chr17 25798354 25798487 -59639993 + MIR SINE MIR 101 233 -29 2549 65 3 0 chr17 25798801 25799107 -59639373 + AluSp SINE Alu 1 307 -6 2608 69 0 0 chr17 25799326 25799631 -59638849 - AluSx SINE Alu -7 305 1 208 241 80 80 chr17 25799669 25799694 -59638786 - MIR SINE MIR -123 139 115 1625 143 4 8 chr17 25799694 25799938 -59638542 + AluSx SINE Alu 44 286 -26 208 241 80 80 chr17 25799938 25800024 -59638456 - MIR SINE MIR -146 116 28 1265 115 111 5 chr17 25802193 25802401 -59636079 + MER30 DNA MER1_type 1 230 0 1645 160 53 3 chr17 25802463 25802745 -59635735 - AluJb SINE Alu -16 296 1 232 271 57 57 chr17 25803670 25803810 -59634670 + L3 LINE CR1 1435 1574 -3 702 181 142 10 chr17 25803954 25804159 -59634321 - L1ME3 LINE L1 -9 6153 5922 2256 79 20 0 chr17 25805519 25805811 -59632669 - AluSp SINE Alu -15 298 1 1905 132 21 3 chr17 25805823 25806111 -59632369 - AluJo SINE Alu -16 296 4 21 0 0 0 chr17 25806596 25806617 -59631863 + AT_rich Low_complexity Low_complexity 1 21 0 2213 94 21 0 chr17 25810266 25810553 -59627927 + AluSx SINE Alu 1 293 -19 288 111 0 0 chr17 25812355 25812400 -59626080 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 53 0 0 chr17 25813337 25813375 -59625105 + AT_rich Low_complexity Low_complexity 1 38 0 182 37 37 0 chr17 25813696 25813723 -59624757 + (TA)n Simple_repeat Simple_repeat 1 28 0 23 33 0 0 chr17 25814320 25814350 -59624130 + AT_rich Low_complexity Low_complexity 1 30 0 276 77 0 0 chr17 25815342 25815381 -59623099 + (TA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr17 25815567 25815589 -59622891 + AT_rich Low_complexity Low_complexity 1 22 0 2855 16 0 0 chr17 25816257 25816568 -59621912 - AluY SINE Alu 0 311 1 194 81 27 0 chr17 25816581 25816618 -59621862 + (TTATA)n Simple_repeat Simple_repeat 5 42 0 2066 114 20 7 chr17 25816936 25817233 -59621247 - AluSq SINE Alu -12 301 1 237 252 266 14 chr17 25817302 25817445 -59621035 + MIR3 SINE MIR 19 197 -11 2409 85 0 0 chr17 25817877 25818170 -59620310 - AluSq SINE Alu -20 293 1 842 105 0 77 chr17 25818176 25818319 -59620161 - FLAM_C SINE Alu 0 133 2 650 161 148 27 chr17 25818701 25818850 -59619630 - AluJo SINE Alu -84 228 62 2339 76 3 0 chr17 25818871 25819160 -59619320 - AluSq SINE Alu -18 295 6 2111 106 0 52 chr17 25819465 25819795 -59618685 - AluSp SINE Alu 0 313 1 1267 135 156 30 chr17 25820471 25820708 -59617772 - AluJo SINE Alu -15 297 31 2247 65 0 0 chr17 25820723 25820986 -59617494 - AluY SINE Alu -48 263 1 655 143 95 40 chr17 25821664 25821790 -59616690 + FLAM_C SINE Alu 1 133 0 2236 110 0 7 chr17 25822223 25822533 -59615947 + AluSg SINE Alu 3 310 0 2062 112 0 7 chr17 25822755 25823032 -59615448 + AluSx SINE Alu 1 275 -37 303 93 0 0 chr17 25823042 25823085 -59615395 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2438 76 0 3 chr17 25823204 25823506 -59614974 - AluY SINE Alu -10 301 1 653 141 339 11 chr17 25823617 25823794 -59614686 - MER46A DNA MER2_type 0 236 2 1551 105 23 146 chr17 25823818 25824026 -59614454 - AluY SINE Alu 0 301 150 2171 90 11 4 chr17 25824026 25824304 -59614176 - AluSg SINE Alu -30 280 1 1551 105 23 146 chr17 25824304 25824438 -59614042 - AluY SINE Alu -151 150 1 300 27 0 0 chr17 25824464 25824501 -59613979 + (CA)n Simple_repeat Simple_repeat 2 38 0 556 197 13 118 chr17 25825136 25825170 -59613310 + MER58A DNA MER1_type 40 76 -2344 1506 176 48 28 chr17 25825170 25825459 -59613021 + AluJo SINE Alu 5 299 -13 556 197 13 118 chr17 25825459 25825576 -59612904 + MER58A DNA MER1_type 76 175 -49 2002 120 20 17 chr17 25825990 25826290 -59612190 - AluSq SINE Alu -12 301 1 294 319 35 40 chr17 25826550 25826712 -59611768 + L2 LINE L2 2554 2715 -599 2408 74 0 0 chr17 25826712 25826996 -59611484 + AluSx SINE Alu 1 284 -28 180 0 0 0 chr17 25826996 25827016 -59611464 + (TA)n Simple_repeat Simple_repeat 2 21 0 294 319 35 40 chr17 25827016 25827078 -59611402 + L2 LINE L2 2713 2778 -536 1858 97 0 20 chr17 25827356 25827604 -59610876 - AluSx SINE Alu -69 243 1 311 250 0 0 chr17 25827792 25827868 -59610612 + MER116 DNA Mariner 1 76 -4 1930 130 18 0 chr17 25828001 25828285 -59610195 - AluSx SINE Alu -20 292 4 2100 115 13 13 chr17 25828697 25829009 -59609471 + AluSq SINE Alu 1 312 -1 2508 48 0 3 chr17 25829222 25829513 -59608967 - AluY SINE Alu -21 290 1 25 0 0 0 chr17 25830305 25830330 -59608150 + AT_rich Low_complexity Low_complexity 1 25 0 1172 208 95 15 chr17 25830513 25830777 -59607703 - AluJo SINE Alu -15 287 3 1921 147 13 13 chr17 25830781 25831081 -59607399 - AluSx SINE Alu -12 300 1 589 206 0 0 chr17 25831411 25831513 -59606967 + AluJ/FLAM SINE Alu 1 102 -210 660 178 0 0 chr17 25831513 25831620 -59606860 + AluJo/FRAM SINE Alu 144 250 -62 1154 172 5 36 chr17 25831620 25831670 -59606810 + AluJo SINE Alu 85 135 -177 2157 121 10 7 chr17 25831670 25831975 -59606505 + AluSx SINE Alu 1 306 -6 1734 130 0 82 chr17 25831979 25832309 -59606171 + AluSx SINE Alu 1 303 -9 1154 172 5 36 chr17 25832309 25832474 -59606006 + AluJo SINE Alu 138 298 -14 991 134 30 18 chr17 25832512 25832676 -59605804 + FRAM SINE Alu 1 166 -10 2370 73 7 0 chr17 25832739 25833027 -59605453 - AluY SINE Alu -20 291 2 401 224 12 0 chr17 25833159 25833244 -59605236 + MSTD LTR MaLR 258 343 -53 2152 102 23 16 chr17 25833245 25833549 -59604931 + AluSg SINE Alu 5 310 0 836 155 0 7 chr17 25834305 25834447 -59604033 - AluJo/FRAM SINE Alu -13 299 159 698 122 0 0 chr17 25834450 25834548 -59603932 - AluJ/FLAM SINE Alu -213 99 2 2536 89 0 0 chr17 25835390 25835703 -59602777 + AluSq SINE Alu 1 313 0 2195 101 3 0 chr17 25835987 25836275 -59602205 + AluSg SINE Alu 1 289 -21 2335 99 10 0 chr17 25836284 25836586 -59601894 + AluSc SINE Alu 5 309 0 268 279 123 0 chr17 25838738 25838860 -59599620 - MIR SINE MIR -2 260 124 2382 68 3 7 chr17 25839016 25839310 -59599170 - AluY SINE Alu -18 293 1 293 228 147 44 chr17 25839598 25839734 -59598746 - MIR SINE MIR -111 151 2 1442 177 42 24 chr17 25839844 25840132 -59598348 + AluJb SINE Alu 10 302 -10 2217 119 3 0 chr17 25840277 25840579 -59597901 + AluSq SINE Alu 1 303 -10 1499 128 155 8 chr17 25840892 25841150 -59597330 - AluSg SINE Alu -14 296 1 1790 146 42 36 chr17 25841342 25841650 -59596830 + AluSx SINE Alu 3 312 0 210 71 0 0 chr17 25842002 25842030 -59596450 + (A)n Simple_repeat Simple_repeat 1 28 0 24 0 0 0 chr17 25843599 25843623 -59594857 + GC_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 25843797 25843820 -59594660 + GC_rich Low_complexity Low_complexity 1 23 0 44 35 0 0 chr17 25843834 25843892 -59594588 + GC_rich Low_complexity Low_complexity 1 58 0 202 284 30 0 chr17 25844679 25844746 -59593734 + C-rich Low_complexity Low_complexity 1 69 0 255 254 0 0 chr17 25844871 25844993 -59593487 + (TGG)n Simple_repeat Simple_repeat 1 122 0 180 97 0 0 chr17 25845478 25845509 -59592971 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 300 271 113 28 chr17 25846073 25846250 -59592230 + L1ME3A LINE L1 5959 6150 -20 2252 164 74 0 chr17 25846260 25846681 -59591799 - L1MB3 LINE L1 0 6183 5732 2086 112 22 0 chr17 25846921 25847218 -59591262 - AluSp SINE Alu 0 303 1 1687 168 50 3 chr17 25847365 25847663 -59590817 + AluJb SINE Alu 1 312 0 2260 77 0 11 chr17 25848158 25848444 -59590036 + AluSc SINE Alu 1 283 -26 1219 170 15 93 chr17 25848662 25848839 -59589641 - AluJb SINE Alu -11 301 159 276 91 0 0 chr17 25848839 25848883 -59589597 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1219 170 15 93 chr17 25848883 25849029 -59589451 - AluJb SINE Alu -153 159 3 2305 106 3 0 chr17 25849154 25849456 -59589024 - AluSc SINE Alu -6 303 1 22 43 0 21 chr17 25849657 25849675 -59588805 + AT_rich Low_complexity Low_complexity 1 18 -28 2051 115 7 0 chr17 25849675 25849953 -59588527 + AluSq SINE Alu 1 280 -33 22 43 0 21 chr17 25849953 25849981 -59588499 + AT_rich Low_complexity Low_complexity 18 46 0 1561 169 8 23 chr17 25849982 25850248 -59588232 + AluJb SINE Alu 1 262 -50 27 73 0 0 chr17 25850268 25850323 -59588157 + AT_rich Low_complexity Low_complexity 1 55 0 2036 101 7 42 chr17 25850355 25850663 -59587817 - AluSx SINE Alu -15 297 1 181 232 0 54 chr17 25850678 25850734 -59587746 - L2 LINE L2 0 3313 3261 21 36 0 0 chr17 25850734 25850762 -59587718 + AT_rich Low_complexity Low_complexity 1 28 0 367 276 10 0 chr17 25850880 25850978 -59587502 + MIR3 SINE MIR 105 203 -5 473 333 13 21 chr17 25851437 25851674 -59586806 + MIR SINE MIR 5 239 -23 2134 117 0 63 chr17 25851681 25851868 -59586612 - AluSx SINE Alu 0 312 154 2345 104 0 3 chr17 25851868 25852177 -59586303 - AluSg SINE Alu -2 308 1 2134 117 0 63 chr17 25852177 25852322 -59586158 - AluSx SINE Alu -158 154 1 289 133 0 55 chr17 25852322 25852387 -59586093 - AluJb SINE Alu -166 136 84 2169 114 7 3 chr17 25852566 25852863 -59585617 + AluSx SINE Alu 1 298 -14 2279 104 0 3 chr17 25852919 25853216 -59585264 + AluSq SINE Alu 1 296 -17 1561 167 3 82 chr17 25853374 25853507 -59584973 + AluJo SINE Alu 1 143 -169 2686 40 0 0 chr17 25853507 25853808 -59584672 - AluY SINE Alu -10 301 1 1561 167 3 82 chr17 25853808 25854003 -59584477 + AluJo SINE Alu 143 303 -9 1932 151 3 22 chr17 25854280 25854591 -59583889 + AluJb SINE Alu 1 305 -7 1282 204 164 76 chr17 25854676 25855094 -59583386 - MLT1F1 LTR MaLR -1 566 97 2089 108 31 0 chr17 25855094 25855380 -59583100 + AluSx SINE Alu 1 295 -17 1282 204 164 76 chr17 25855380 25855473 -59583007 - MLT1F1 LTR MaLR -470 97 14 22 35 0 0 chr17 25855629 25855658 -59582822 + AT_rich Low_complexity Low_complexity 1 29 0 667 275 17 47 chr17 25856048 25856173 -59582307 + L1MD2 LINE L1 6133 6260 -99 2124 111 7 26 chr17 25856173 25856480 -59582000 + AluSx SINE Alu 1 301 -11 667 275 17 47 chr17 25856480 25856562 -59581918 + L1MD2 LINE L1 6260 6335 -24 1673 137 107 0 chr17 25856562 25856825 -59581655 - AluSg SINE Alu -19 291 1 667 275 17 47 chr17 25856825 25856849 -59581631 + L1MD2 LINE L1 6335 6358 -1 21 57 0 0 chr17 25856890 25856925 -59581555 + AT_rich Low_complexity Low_complexity 1 35 0 2096 78 37 0 chr17 25856942 25857234 -59581246 + AluSg SINE Alu 2 303 0 2271 101 0 0 chr17 25857289 25857586 -59580894 + AluSc SINE Alu 1 297 -12 1666 146 3 74 chr17 25857591 25857900 -59580580 + AluJo SINE Alu 1 287 -25 31 0 0 0 chr17 25857900 25857931 -59580549 + AT_rich Low_complexity Low_complexity 1 31 0 2618 46 7 3 chr17 25857933 25858239 -59580241 + AluY SINE Alu 1 307 -4 1730 85 0 5 chr17 25858246 25858470 -59580010 + AluSc SINE Alu 72 294 -15 550 220 52 94 chr17 25858730 25859016 -59579464 - MLT1D LTR MaLR -231 274 1 539 163 0 0 chr17 25859016 25859102 -59579378 + MER97c DNA MER1_type? 61 146 -944 1557 108 132 16 chr17 25859102 25859387 -59579093 - AluSg1 SINE Alu 0 314 1 1661 166 6 38 chr17 25859389 25859708 -59578772 - AluJb SINE Alu -3 309 1 32 0 0 0 chr17 25859711 25859743 -59578737 + AT_rich Low_complexity Low_complexity 1 32 0 1939 135 0 21 chr17 25859756 25860045 -59578435 - AluSx SINE Alu -29 283 1 572 263 128 17 chr17 25860215 25860512 -59577968 + L2 LINE L2 2972 3301 -12 787 302 114 29 chr17 25861067 25861269 -59577211 + L2 LINE L2 2145 2328 -986 2192 128 0 0 chr17 25861269 25861566 -59576914 + AluSq SINE Alu 1 297 -16 183 42 0 0 chr17 25861569 25861593 -59576887 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 787 302 114 29 chr17 25861593 25861870 -59576610 + L2 LINE L2 2329 2669 -645 274 286 88 11 chr17 25862264 25862355 -59576125 + L2 LINE L2 3175 3272 0 1874 149 3 7 chr17 25862432 25862721 -59575759 - AluJb SINE Alu -24 288 1 2236 79 14 7 chr17 25863238 25863554 -59574926 - AluSx SINE Alu 0 318 1 2003 113 38 20 chr17 25864367 25864660 -59573820 - AluSx SINE Alu -14 298 1 1105 214 175 8 chr17 25864758 25865015 -59573465 + AluSg SINE Alu 1 300 0 1822 115 78 0 chr17 25865061 25865330 -59573150 + AluSx SINE Alu 1 290 -22 300 280 71 59 chr17 25865345 25865386 -59573094 + HAL1b LINE L1 393 432 -1965 2161 118 0 0 chr17 25865386 25865682 -59572798 - AluSx SINE Alu -6 306 11 300 280 71 59 chr17 25865682 25865923 -59572557 + HAL1b LINE L1 432 1710 -687 2535 71 0 0 chr17 25865931 25866239 -59572241 + AluY SINE Alu 1 308 -3 1974 95 80 0 chr17 25866631 25866905 -59571575 + AluY SINE Alu 1 296 -15 1934 136 0 48 chr17 25867073 25867257 -59571223 + AluJb SINE Alu 1 165 -147 2401 94 0 0 chr17 25867257 25867564 -59570916 - AluSx SINE Alu -5 307 1 1934 136 0 48 chr17 25867564 25867689 -59570791 + AluJb SINE Alu 165 295 -17 517 291 74 5 chr17 25867744 25867933 -59570547 + MIR SINE MIR 5 206 -56 1963 121 0 7 chr17 25867995 25868267 -59570213 - AluSx SINE Alu -23 289 20 1866 154 0 55 chr17 25868329 25868473 -59570007 + AluJb SINE Alu 1 151 -161 2260 118 3 0 chr17 25868473 25868779 -59569701 + AluSx SINE Alu 1 307 -5 1866 154 0 55 chr17 25868779 25868964 -59569516 + AluJb SINE Alu 151 312 0 490 207 12 95 chr17 25868964 25869133 -59569347 + L1ME4a LINE L1 5965 6119 -2 2317 119 0 0 chr17 25869196 25869506 -59568974 + AluSg SINE Alu 1 310 0 227 229 10 83 chr17 25870038 25870134 -59568346 - L2 LINE L2 0 3272 3184 1636 121 18 98 chr17 25870139 25870276 -59568204 + AluJb SINE Alu 1 147 -165 1939 151 16 3 chr17 25870276 25870581 -59567899 + AluSx SINE Alu 1 309 -3 1636 121 18 98 chr17 25870581 25870781 -59567699 + AluJb SINE Alu 147 311 -1 282 289 39 39 chr17 25870802 25870958 -59567522 - L2 LINE L2 -81 3232 3077 1845 87 0 0 chr17 25871018 25871248 -59567232 + AluSg1 SINE Alu 1 230 -79 2224 102 3 3 chr17 25872193 25872498 -59565982 - AluSx SINE Alu -7 305 1 2697 215 22 47 chr17 25872505 25872613 -59565867 + MER82 DNA MER2_type 22 131 -522 2446 70 0 10 chr17 25872613 25872915 -59565565 - AluY SINE Alu -12 299 1 2697 215 22 47 chr17 25872915 25872994 -59565486 + MER82 DNA MER2_type 131 210 -443 811 161 0 0 chr17 25872994 25873118 -59565362 + FLAM_C SINE Alu 1 124 -9 2697 215 22 47 chr17 25873118 25873571 -59564909 + MER82 DNA MER2_type 210 647 -6 374 289 0 23 chr17 25873599 25873727 -59564753 - MIR SINE MIR -127 135 11 261 297 0 0 chr17 25873905 25873979 -59564501 - MIR SINE MIR -75 187 114 1972 159 10 13 chr17 25873979 25874293 -59564187 + AluSq SINE Alu 1 313 0 487 223 166 106 chr17 25874295 25874547 -59563933 - MLT1L LTR MaLR -296 319 45 2192 119 0 0 chr17 25874547 25874849 -59563631 + AluY SINE Alu 1 302 -9 487 223 166 106 chr17 25874849 25874897 -59563583 - MLT1L LTR MaLR -570 45 1 2010 161 0 3 chr17 25874899 25875204 -59563276 + AluSx SINE Alu 2 305 -7 2907 188 104 17 chr17 25875319 25875972 -59562508 - L1MC4 LINE L1 -132 7910 7201 1994 135 3 3 chr17 25875992 25876280 -59562200 - AluSx SINE Alu -22 290 3 1082 217 90 67 chr17 25876280 25876530 -59561950 - L1MC4 LINE L1 -993 7049 6787 663 195 39 0 chr17 25876530 25876658 -59561822 + FLAM_C SINE Alu 1 133 0 1082 217 90 67 chr17 25876658 25876753 -59561727 - L1MC4 LINE L1 -1255 6787 6696 1309 214 80 37 chr17 25876754 25876799 -59561681 + MLT1A1 LTR MaLR 1 43 -322 2175 121 7 3 chr17 25876799 25877097 -59561383 + AluSx SINE Alu 1 299 -13 1309 214 80 37 chr17 25877097 25877143 -59561337 + MLT1A1 LTR MaLR 43 86 -279 1540 165 13 71 chr17 25877143 25877276 -59561204 + AluJo SINE Alu 1 140 -172 1613 214 0 4 chr17 25877276 25877556 -59560924 + AluJb SINE Alu 1 279 -33 324 0 0 0 chr17 25877560 25877596 -59560884 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1540 165 13 71 chr17 25877596 25877766 -59560714 + AluJo SINE Alu 143 291 -21 1309 214 80 37 chr17 25877766 25878023 -59560457 + MLT1A1 LTR MaLR 86 365 0 225 245 0 0 chr17 25878082 25878131 -59560349 + MER5A DNA MER1_type 21 69 -120 2270 105 7 0 chr17 25878132 25878428 -59560052 + AluSx SINE Alu 1 298 -14 401 127 0 14 chr17 25878428 25878499 -59559981 + (GGGA)n Simple_repeat Simple_repeat 3 72 0 221 196 261 22 chr17 25878501 25878593 -59559887 + MER5A DNA MER1_type 70 183 -6 925 111 0 15 chr17 25878601 25878736 -59559744 + AluJ SINE Alu 1 133 -169 753 133 0 0 chr17 25878743 25878856 -59559624 + AluJ SINE Alu 200 312 0 2215 111 7 3 chr17 25878979 25879286 -59559194 + AluSx SINE Alu 1 308 -4 636 190 0 25 chr17 25879302 25879423 -59559057 + FLAM_A SINE Alu 8 125 -17 200 329 13 0 chr17 25879467 25879546 -59558934 + CT-rich Low_complexity Low_complexity 1 80 0 238 340 21 10 chr17 25879782 25879879 -59558601 + MIR SINE MIR 30 127 -135 1905 162 3 10 chr17 25880027 25880336 -59558144 + AluJo SINE Alu 1 307 -5 1930 123 56 3 chr17 25880345 25880630 -59557850 + AluSx SINE Alu 1 300 -12 244 277 128 11 chr17 25880634 25880728 -59557752 + MIR SINE MIR 157 261 -1 296 248 85 16 chr17 25880733 25880862 -59557618 + MIR SINE MIR 124 261 -1 2075 122 7 13 chr17 25880983 25881150 -59557330 - AluSx SINE Alu -10 302 136 2434 80 0 3 chr17 25881150 25881449 -59557031 - AluSc SINE Alu -11 298 1 2075 122 7 13 chr17 25881449 25881585 -59556895 - AluSx SINE Alu -176 136 1 2425 74 13 0 chr17 25881633 25881932 -59556548 + AluSp SINE Alu 1 303 -10 318 282 49 122 chr17 25882780 25883124 -59555356 + L2 LINE L2 2880 3198 -74 404 266 35 0 chr17 25883180 25883293 -59555187 + L2 LINE L2 3197 3313 0 225 0 0 0 chr17 25883386 25883411 -59555069 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 2218 121 0 0 chr17 25883427 25883724 -59554756 - AluSx SINE Alu -15 297 1 2268 94 7 0 chr17 25883729 25884027 -59554453 - AluSp SINE Alu -13 300 1 1834 104 47 47 chr17 25884031 25884328 -59554152 - AluJb SINE Alu -15 297 1 410 107 0 0 chr17 25884373 25884429 -59554051 + AluJ/FLAM SINE Alu 2 57 -255 1011 191 13 65 chr17 25884582 25884812 -59553668 - MER20 DNA MER1_type -1 218 1 224 336 37 26 chr17 25884824 25885073 -59553407 - L2 LINE L2 -228 3044 2753 2032 137 0 22 chr17 25885091 25885404 -59553076 - AluSx SINE Alu -6 306 1 449 151 0 0 chr17 25885409 25885482 -59552998 - L1MB4 LINE L1 -295 5885 5813 444 179 0 66 chr17 25885546 25885808 -59552672 + (TA)n Simple_repeat Simple_repeat 1 244 0 235 230 46 11 chr17 25885810 25885897 -59552583 + L1MC4 LINE L1 6614 6703 -1339 454 217 0 32 chr17 25885905 25886062 -59552418 + (TA)n Simple_repeat Simple_repeat 1 152 0 312 204 0 92 chr17 25886072 25886170 -59552310 + L1MC4 LINE L1 6614 6702 -1340 227 234 0 53 chr17 25886207 25886301 -59552179 + L1MC4 LINE L1 6614 6702 -1340 197 128 0 26 chr17 25886305 25886344 -59552136 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 323 206 0 72 chr17 25886344 25886441 -59552039 - L1MC4 LINE L1 -1339 6703 6614 2100 154 31 3 chr17 25886463 25886819 -59551661 - L1MB4 LINE L1 -390 5793 5428 2006 154 0 0 chr17 25886833 25887132 -59551348 - AluJb SINE Alu -7 305 7 1977 118 10 14 chr17 25887357 25887492 -59550988 + AluSx SINE Alu 1 135 -177 2230 123 0 7 chr17 25887492 25887802 -59550678 + AluSx SINE Alu 1 308 -4 1977 118 10 14 chr17 25887802 25887954 -59550526 + AluSx SINE Alu 135 287 -25 220 254 35 88 chr17 25888155 25888269 -59550211 + L2 LINE L2 3155 3262 -10 29 47 0 0 chr17 25888372 25888415 -59550065 + AT_rich Low_complexity Low_complexity 1 43 0 1765 162 25 35 chr17 25888430 25888744 -59549736 - AluJb SINE Alu -1 311 1 1950 159 3 0 chr17 25888775 25889064 -59549416 + AluSx SINE Alu 1 290 -22 2323 98 0 3 chr17 25889316 25889612 -59548868 + AluSx SINE Alu 1 295 -17 1952 192 31 43 chr17 25889634 25890051 -59548429 + L1M4 LINE L1 4823 5234 -912 2108 141 13 0 chr17 25890051 25890350 -59548130 - AluSx SINE Alu -9 303 1 1952 192 31 43 chr17 25890350 25890447 -59548033 + L1M4 LINE L1 5234 5331 -815 320 217 70 70 chr17 25890449 25890578 -59547902 + L1M4 LINE L1 4183 4311 -1835 807 217 0 50 chr17 25890578 25890692 -59547788 + AluJo SINE Alu 125 226 -86 2042 148 0 3 chr17 25890692 25890990 -59547490 + AluJb SINE Alu 12 308 -4 807 217 0 50 chr17 25890990 25891073 -59547407 + AluJo SINE Alu 226 312 0 1801 117 109 0 chr17 25891125 25891391 -59547089 - AluSq SINE Alu -18 295 1 2105 127 0 14 chr17 25891873 25892165 -59546315 - AluSx SINE Alu -24 288 1 1286 221 66 15 chr17 25892177 25892571 -59545909 + L1M4 LINE L1 4421 4834 -1312 247 288 14 0 chr17 25892584 25892657 -59545823 + G-rich Low_complexity Low_complexity 6 79 0 335 351 35 0 chr17 25892865 25892979 -59545501 - L2 LINE L2 -2 3270 3153 2156 122 7 3 chr17 25892980 25893276 -59545204 + AluSx SINE Alu 1 297 -15 1435 157 50 75 chr17 25893302 25893620 -59544860 - AluJo SINE Alu -2 310 1 205 368 45 65 chr17 25893621 25893855 -59544625 - L2 LINE L2 -1900 1414 1190 2545 66 0 0 chr17 25893855 25894156 -59544324 - AluY SINE Alu -10 301 1 205 368 45 65 chr17 25894156 25894318 -59544162 - L2 LINE L2 -2124 1190 1026 3348 161 12 16 chr17 25894869 25895041 -59543439 - MER41D LTR ERV1 0 557 386 2310 82 7 0 chr17 25895041 25895346 -59543134 - AluSp SINE Alu 0 307 1 3348 161 12 16 chr17 25895346 25895731 -59542749 - MER41D LTR ERV1 -171 386 1 955 184 0 0 chr17 25895856 25896008 -59542472 + AluJb SINE Alu 137 288 -24 2446 72 3 7 chr17 25896587 25896891 -59541589 + AluSp SINE Alu 1 303 -10 26 30 0 0 chr17 25898171 25898204 -59540276 + GC_rich Low_complexity Low_complexity 1 33 0 2302 89 3 19 chr17 25898357 25898673 -59539807 - AluY SINE Alu 0 311 1 2032 99 33 4 chr17 25899185 25899457 -59539023 + AluSq SINE Alu 1 280 -33 497 275 48 112 chr17 25899948 25900238 -59538242 - MLT1K LTR MaLR -254 334 70 1951 142 32 0 chr17 25900238 25900520 -59537960 - AluJb SINE Alu -21 291 1 497 275 48 112 chr17 25900520 25900585 -59537895 - MLT1K LTR MaLR -518 70 2 275 351 90 0 chr17 25901182 25901293 -59537187 - L2 LINE L2 -12 3260 3140 450 247 108 36 chr17 25901313 25901507 -59536973 - MLT1K LTR MaLR -7 581 374 897 80 0 0 chr17 25901575 25901688 -59536792 + AluSg/x SINE Alu 188 300 -9 1808 112 4 16 chr17 25901692 25901941 -59536539 + AluSg SINE Alu 1 246 -64 697 79 0 0 chr17 25902041 25902130 -59536350 - AluS SINE Alu -222 90 2 477 242 86 0 chr17 25902131 25902259 -59536221 + MIR SINE MIR 121 259 -3 521 103 0 0 chr17 25902295 25902363 -59536117 + U4 snRNA snRNA 1 68 -77 1573 186 8 0 chr17 25902368 25902626 -59535854 + AluSx SINE Alu 1 260 -52 281 264 55 22 chr17 25902654 25902745 -59535735 - MLT1K LTR MaLR -290 298 205 713 74 0 0 chr17 25902831 25902926 -59535554 - AluS SINE Alu -216 96 2 2536 35 3 19 chr17 25903038 25903349 -59535131 - AluY SINE Alu -5 306 1 35 41 0 0 chr17 25904262 25904311 -59534169 + GC_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr17 25904372 25904403 -59534077 + GC_rich Low_complexity Low_complexity 1 31 0 2002 110 4 4 chr17 25904557 25904830 -59533650 + AluSx SINE Alu 1 273 -39 659 242 59 32 chr17 25905136 25905355 -59533125 + MIR SINE MIR 2 226 -36 339 247 107 27 chr17 25905390 25905540 -59532940 - MIR SINE MIR -1 261 100 481 216 64 24 chr17 25905789 25905914 -59532566 + MIR3 SINE MIR 58 187 -21 235 238 24 119 chr17 25907596 25907644 -59530836 + L2 LINE L2 3200 3251 -62 2328 91 0 7 chr17 25907644 25907942 -59530538 - AluY SINE Alu -15 296 1 235 238 24 119 chr17 25907942 25908019 -59530461 + L2 LINE L2 3251 3313 0 235 261 22 43 chr17 25908454 25908546 -59529934 - MIR SINE MIR -27 235 146 2418 60 7 27 chr17 25908607 25908908 -59529572 - AluY SINE Alu -16 295 1 2198 102 17 3 chr17 25908920 25909215 -59529265 - AluSg SINE Alu -11 299 1 2485 62 0 26 chr17 25909223 25909529 -59528951 - AluY SINE Alu -13 298 1 467 263 105 11 chr17 25909810 25910000 -59528480 - MIR SINE MIR -1 261 54 3159 183 39 33 chr17 25910024 25910584 -59527896 - L1MB7 LINE L1 -11 6173 5607 2331 92 0 0 chr17 25910584 25910878 -59527602 - AluY SINE Alu -17 294 1 3159 183 39 33 chr17 25910878 25910985 -59527495 - L1MB7 LINE L1 -577 5607 5502 2115 95 4 0 chr17 25911088 25911362 -59527118 - AluSx SINE Alu -37 275 1 349 250 56 19 chr17 25911405 25911513 -59526967 - MER5B DNA MER1_type -63 115 4 1473 201 25 74 chr17 25911527 25911852 -59526628 + MLT1A2 LTR MaLR 2 306 -68 2330 108 0 0 chr17 25911852 25912157 -59526323 - AluSx SINE Alu -7 305 1 1473 201 25 74 chr17 25912157 25912223 -59526257 + MLT1A2 LTR MaLR 306 374 0 2281 98 0 13 chr17 25912241 25912558 -59525922 - AluSq SINE Alu 0 313 1 1166 85 251 20 chr17 25912559 25912758 -59525722 - AluSg1 SINE Alu -9 300 56 214 241 0 19 chr17 25912845 25912899 -59525581 + MIR SINE MIR 199 251 -11 204 125 0 0 chr17 25913501 25913533 -59524947 + (T)n Simple_repeat Simple_repeat 1 32 0 1719 183 7 3 chr17 25913554 25913854 -59524626 - AluJo SINE Alu -9 303 3 2270 78 0 7 chr17 25914211 25914515 -59523965 - AluSc SINE Alu 0 302 1 1499 165 162 17 chr17 25914790 25915136 -59523344 - MSTD LTR MaLR 0 396 1 2281 103 3 0 chr17 25915172 25915464 -59523016 - AluSg SINE Alu -17 293 1 1250 83 13 0 chr17 25915717 25915874 -59522606 - AluSg/x SINE Alu -16 294 136 2047 84 0 111 chr17 25915977 25916309 -59522171 - AluSx SINE Alu -15 297 3 1620 167 56 0 chr17 25916316 25916603 -59521877 - AluJb SINE Alu -9 303 1 1876 102 3 46 chr17 25916606 25916782 -59521698 - AluSq SINE Alu -3 310 128 2227 114 0 0 chr17 25916782 25917079 -59521401 - AluSg SINE Alu -13 297 1 2419 97 0 0 chr17 25917081 25917390 -59521090 - AluY SINE Alu -2 309 1 1876 102 3 46 chr17 25917390 25917494 -59520986 - AluSq SINE Alu -186 127 39 586 151 226 0 chr17 25917580 25917708 -59520772 + FRAM SINE Alu 24 175 0 432 221 165 136 chr17 25917957 25918333 -59520147 + MLT1K LTR MaLR 202 588 0 2299 107 10 0 chr17 25918368 25918667 -59519813 - AluSx SINE Alu -10 302 1 198 0 0 0 chr17 25918802 25918824 -59519656 + (A)n Simple_repeat Simple_repeat 1 22 0 2273 81 0 30 chr17 25919359 25919692 -59518788 - AluY SINE Alu 0 311 1 1153 148 0 6 chr17 25919829 25920011 -59518469 - MLT1F1 LTR MaLR -386 181 1 2251 121 0 10 chr17 25920083 25920397 -59518083 - AluSx SINE Alu -1 311 1 2216 119 0 7 chr17 25920473 25920775 -59517705 - AluSx SINE Alu -10 302 3 284 301 75 34 chr17 25920788 25920934 -59517546 + L2 LINE L2 2359 2510 -804 1640 159 84 22 chr17 25920951 25921271 -59517209 + MER2 DNA MER2_type 6 345 0 284 245 102 0 chr17 25921305 25921403 -59517077 + L2 LINE L2 2581 2688 -626 1115 180 0 0 chr17 25921405 25921583 -59516897 - FRAM SINE Alu -5 171 1 425 97 16 0 chr17 25921689 25921751 -59516729 - AluSq SINE Alu -117 196 134 2320 86 0 42 chr17 25921751 25921920 -59516560 - AluSq SINE Alu -13 300 126 351 0 0 0 chr17 25921920 25921959 -59516521 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2157 84 0 31 chr17 25921959 25922246 -59516234 - AluSg SINE Alu -28 282 5 2320 86 0 42 chr17 25922246 25922388 -59516092 - AluSq SINE Alu -185 128 1 230 308 34 17 chr17 25922404 25922521 -59515959 + L2 LINE L2 2993 3111 -161 222 259 0 0 chr17 25922543 25922597 -59515883 + L2 LINE L2 3214 3267 -5 24 32 0 0 chr17 25922891 25922922 -59515558 + AT_rich Low_complexity Low_complexity 1 31 0 746 137 0 8 chr17 25922924 25923041 -59515439 - FLAM_C SINE Alu -17 116 1 2196 107 0 0 chr17 25923054 25923367 -59515113 - AluSg SINE Alu 0 313 1 189 0 0 0 chr17 25923367 25923388 -59515092 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2146 120 0 0 chr17 25923388 25923672 -59514808 - AluSq SINE Alu -29 284 1 2229 121 0 13 chr17 25923718 25924032 -59514448 - AluSx SINE Alu -2 310 1 713 224 109 5 chr17 25924649 25924850 -59513630 - MIR SINE MIR -36 226 5 2570 55 0 6 chr17 25926638 25926950 -59511530 + AluY SINE Alu 1 310 -1 1891 134 4 4 chr17 25927070 25927339 -59511141 + AluSx SINE Alu 10 278 -34 2489 53 0 31 chr17 25927366 25927687 -59510793 + AluY SINE Alu 1 311 0 333 291 140 22 chr17 25927693 25927872 -59510608 + MIR SINE MIR 57 256 -6 1838 107 3 128 chr17 25928173 25928518 -59509962 + AluSx SINE Alu 1 302 0 1755 84 13 8 chr17 25929381 25929619 -59508861 + AluSc SINE Alu 58 296 -13 2163 112 26 7 chr17 25929629 25929934 -59508546 + AluSq SINE Alu 1 311 -2 385 203 28 63 chr17 25929935 25930078 -59508402 + L1MC5 LINE L1 7649 7786 -175 1626 127 24 106 chr17 25930082 25930413 -59508067 + AluYb8 SINE Alu 6 309 -9 1737 174 3 16 chr17 25930433 25930738 -59507742 + AluJo SINE Alu 5 305 -7 307 219 32 71 chr17 25930739 25930894 -59507586 + L1MC5 LINE L1 7779 7927 -34 313 314 36 18 chr17 25931037 25931257 -59507223 - L2 LINE L2 -1250 2064 1841 379 226 12 0 chr17 25931506 25931590 -59506890 - AluY SINE Alu -1 300 216 634 204 0 0 chr17 25931619 25931732 -59506748 + AluJo/FLAM SINE Alu 6 118 -194 1933 139 7 7 chr17 25931732 25932033 -59506447 - AluSx SINE Alu -11 301 1 309 65 0 0 chr17 25932037 25932083 -59506397 - Alu SINE Alu 0 302 257 1149 30 8 0 chr17 25932362 25932493 -59505987 + AluY SINE Alu 1 132 -179 2189 85 0 51 chr17 25932605 25932921 -59505559 + AluSx SINE Alu 1 300 -12 2503 58 0 0 chr17 25932926 25933218 -59505262 + AluY SINE Alu 1 292 -19 1412 140 92 4 chr17 25934505 25934755 -59503725 + AluSx SINE Alu 38 309 -3 449 170 19 57 chr17 25934755 25934861 -59503619 + L1MD3 LINE L1 7894 7995 0 203 318 116 53 chr17 25935048 25935115 -59503365 - MIR SINE MIR -6 256 195 1649 143 42 31 chr17 25935115 25935402 -59503078 + AluJb SINE Alu 5 294 -18 203 318 116 53 chr17 25935402 25935523 -59502957 - MIR SINE MIR -67 195 56 2313 112 3 0 chr17 25936094 25936399 -59502081 - AluSx SINE Alu -6 306 1 183 80 0 0 chr17 25936491 25936516 -59501964 + (T)n Simple_repeat Simple_repeat 1 25 0 1489 124 0 10 chr17 25936522 25936731 -59501749 - AluSx SINE Alu -105 207 1 472 186 98 0 chr17 25937020 25937122 -59501358 + MER3 DNA MER1_type 94 205 -4 382 285 51 44 chr17 25937347 25937484 -59500996 - MER91A DNA MER1_type -19 177 40 2544 39 0 0 chr17 25937864 25938179 -59500301 + AluY SINE Alu 1 315 0 1302 57 38 0 chr17 25938468 25938626 -59499854 + AluY SINE Alu 127 290 -21 1551 173 28 18 chr17 25938642 25938926 -59499554 + AluJb SINE Alu 7 293 -19 923 251 156 3 chr17 25938945 25939292 -59499188 + L1MB5 LINE L1 3469 3868 -2278 1956 151 0 3 chr17 25939310 25939609 -59498871 + AluSg SINE Alu 1 298 -12 957 203 100 63 chr17 25939611 25939657 -59498823 + L1MB5 LINE L1 4018 4061 -2085 2240 87 13 7 chr17 25939657 25939955 -59498525 + AluSp SINE Alu 1 300 -13 957 203 100 63 chr17 25939955 25940208 -59498272 + L1MB5 LINE L1 4061 4328 -1818 1691 152 42 3 chr17 25940212 25940495 -59497985 + AluJb SINE Alu 6 299 -13 1037 176 6 0 chr17 25940495 25940665 -59497815 + AluJb SINE Alu 134 304 -8 1259 206 49 80 chr17 25940665 25940747 -59497733 + L1MB5 LINE L1 4322 4405 -1741 1733 173 7 17 chr17 25940747 25941048 -59497432 + AluJo SINE Alu 1 298 -14 2266 82 24 0 chr17 25941052 25941344 -59497136 + AluSp SINE Alu 2 300 -13 1259 206 49 80 chr17 25941344 25941690 -59496790 + L1MB5 LINE L1 4408 4743 -1403 1102 215 73 36 chr17 25941690 25942020 -59496460 - MER2 DNA MER2_type -1 343 2 1259 206 49 80 chr17 25942020 25942036 -59496444 + L1MB5 LINE L1 4743 4758 -1388 1744 160 3 70 chr17 25942036 25942348 -59496132 + AluJo SINE Alu 1 291 -21 1912 159 13 0 chr17 25942354 25942655 -59495825 + AluJb SINE Alu 1 305 -7 324 225 0 0 chr17 25942656 25942727 -59495753 + L1MB5 LINE L1 5124 5194 -952 337 197 47 31 chr17 25943091 25943218 -59495262 + L1MB5 LINE L1 5197 5325 -821 2078 123 3 7 chr17 25943226 25943535 -59494945 + AluSx SINE Alu 1 308 -4 195 276 69 0 chr17 25943557 25943615 -59494865 - L2 LINE L2 -4 3309 3248 35 41 0 0 chr17 25943966 25944015 -59494465 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 25944215 25944237 -59494243 + AT_rich Low_complexity Low_complexity 1 22 0 2190 106 0 3 chr17 25944264 25944556 -59493924 - AluSx SINE Alu -17 295 5 3649 151 28 112 chr17 25944889 25945272 -59493208 + L1MB5 LINE L1 5343 5757 -417 1909 116 7 25 chr17 25945272 25945556 -59492924 + AluSx SINE Alu 1 279 -33 3649 151 28 112 chr17 25945556 25945682 -59492798 + L1MB5 LINE L1 5757 5892 -282 2252 116 0 7 chr17 25945682 25945985 -59492495 + AluSx SINE Alu 1 301 -11 2225 108 0 3 chr17 25945991 25946277 -59492203 + AluSx SINE Alu 1 285 -27 3649 151 28 112 chr17 25946277 25946358 -59492122 + L1MB5 LINE L1 5897 5983 -191 2444 76 7 3 chr17 25946358 25946662 -59491818 + AluY SINE Alu 1 305 -6 3649 151 28 112 chr17 25946662 25946921 -59491559 + L1MB5 LINE L1 5983 6124 -50 1990 161 3 0 chr17 25946921 25947226 -59491254 - AluJb SINE Alu -6 306 1 3649 151 28 112 chr17 25947226 25947267 -59491213 + L1MB5 LINE L1 6124 6167 -7 202 224 0 134 chr17 25947414 25947481 -59490999 + MIR SINE MIR 87 144 -64 2237 128 0 0 chr17 25948198 25948503 -59489977 + AluSx SINE Alu 1 305 -7 312 27 0 0 chr17 25948514 25948551 -59489929 + (GGAA)n Simple_repeat Simple_repeat 4 40 0 375 225 203 5 chr17 25948615 25948802 -59489678 + L1ME3 LINE L1 5938 6161 -1 1974 159 0 3 chr17 25948848 25949150 -59489330 + AluSx SINE Alu 1 301 -11 2868 9 0 13 chr17 25949150 25949465 -59489015 + AluYa5 SINE Alu 1 311 0 2362 76 9 22 chr17 25949606 25949921 -59488559 + AluSx SINE Alu 1 311 -1 2232 113 0 7 chr17 25949988 25950290 -59488190 + AluSq SINE Alu 1 300 -13 491 177 89 0 chr17 25950290 25950414 -59488066 - MIR SINE MIR -48 214 80 2475 77 3 0 chr17 25950908 25951206 -59487274 + AluY SINE Alu 1 299 -12 1196 106 19 0 chr17 25951207 25951367 -59487113 + AluSq SINE Alu 132 294 -19 1386 189 12 12 chr17 25951548 25951802 -59486678 - AluJo SINE Alu -9 303 50 277 30 0 0 chr17 25951802 25951835 -59486645 + MER51A-int LTR ERV1 7116 7148 -389 605 199 61 0 chr17 25951835 25951966 -59486514 + LTR54B LTR ERV1 3 141 -357 2045 158 48 0 chr17 25951966 25952296 -59486184 + MER51A-int LTR ERV1 7470 7815 -1 3490 129 65 66 chr17 25952298 25952933 -59485547 + MER51A LTR ERV1 1 634 0 956 146 61 0 chr17 25953272 25953436 -59485044 + L1MD3 LINE L1 7729 7902 -93 271 98 24 0 chr17 25953437 25953478 -59485002 + Alu SINE Alu 1 42 -257 1405 104 0 0 chr17 25953578 25953760 -59484720 - AluSq SINE Alu -131 182 1 1642 197 3 7 chr17 25953844 25954138 -59484342 + AluJo SINE Alu 5 297 -15 2346 86 0 0 chr17 25954259 25954560 -59483920 + AluY SINE Alu 3 303 -8 1748 140 7 7 chr17 25954615 25954887 -59483593 + AluJb SINE Alu 30 301 -11 269 229 109 115 chr17 25954932 25955039 -59483441 - MIR SINE MIR -2 260 154 2317 95 0 19 chr17 25955039 25955354 -59483126 + AluSq SINE Alu 4 312 -1 269 229 109 115 chr17 25955354 25955366 -59483114 - MIR SINE MIR -108 154 143 2234 97 10 3 chr17 25955366 25955666 -59482814 + AluSp SINE Alu 1 302 -11 269 229 109 115 chr17 25955666 25955703 -59482777 - MIR SINE MIR -119 143 107 1225 195 79 14 chr17 25955703 25955980 -59482500 + AluJo SINE Alu 1 295 -17 269 229 109 115 chr17 25955980 25956013 -59482467 - MIR SINE MIR -155 107 70 198 103 0 0 chr17 25956017 25956046 -59482434 + (TA)n Simple_repeat Simple_repeat 2 30 0 234 283 0 22 chr17 25956047 25956139 -59482341 - L1MC4 LINE L1 -1339 6703 6614 * 246 244 47 23 chr17 25956073 25956159 -59482321 + L1MC4 LINE L1 6616 6703 -1339 248 196 54 0 chr17 25956159 25956215 -59482265 + (CATG)n Simple_repeat Simple_repeat 2 60 0 273 119 0 0 chr17 25956216 25956258 -59482222 + (TA)n Simple_repeat Simple_repeat 2 43 0 2155 100 0 4 chr17 25956271 25956550 -59481930 - AluSg SINE Alu -32 278 1 2328 97 0 10 chr17 25956551 25956859 -59481621 - AluSx SINE Alu -7 305 1 2115 115 27 3 chr17 25956860 25957156 -59481324 - AluSx SINE Alu -9 303 1 1828 159 0 44 chr17 25957904 25958225 -59480255 + AluJb SINE Alu 1 307 -5 1885 146 3 7 chr17 25958316 25958618 -59479862 - AluSx SINE Alu -5 307 7 1588 179 21 17 chr17 25958622 25958912 -59479568 - AluJo SINE Alu -21 291 1 856 129 0 0 chr17 25958936 25959060 -59479420 - FLAM_C SINE Alu -19 124 1 1597 204 17 0 chr17 25959442 25959731 -59478749 - AluJo SINE Alu -18 294 1 1614 157 7 60 chr17 25959779 25960102 -59478378 + AluJb SINE Alu 1 307 0 940 208 0 0 chr17 25960372 25960545 -59477935 + AluJb SINE Alu 137 309 -3 1726 147 44 3 chr17 25961055 25961348 -59477132 - AluSg SINE Alu -5 305 1 972 119 0 8 chr17 25961353 25961487 -59476993 - AluSq/x SINE Alu -179 133 1 21 57 0 0 chr17 25961582 25961617 -59476863 + AT_rich Low_complexity Low_complexity 1 35 0 1555 187 10 17 chr17 25961639 25961928 -59476552 + AluJb SINE Alu 3 289 -23 1620 151 53 33 chr17 25962295 25962594 -59475886 + AluJb SINE Alu 4 308 -4 1563 136 136 98 chr17 25962595 25962993 -59475487 + MSTA LTR MaLR 1 413 -15 1914 149 3 19 chr17 25963028 25963337 -59475143 + AluJo SINE Alu 2 305 -7 490 258 133 0 chr17 25963342 25963493 -59474987 + MER112 DNA MER1_type 90 260 0 2291 96 13 3 chr17 25963826 25964129 -59474351 - AluSq SINE Alu -5 308 3 1103 81 0 7 chr17 25964229 25964365 -59474115 - AluSq/x SINE Alu -177 135 1 1529 169 70 18 chr17 25964368 25964641 -59473839 - AluJo SINE Alu -16 296 10 2175 96 24 0 chr17 25964742 25965034 -59473446 + AluSg SINE Alu 1 299 -11 1965 147 58 12 chr17 25965080 25965406 -59473074 - MER61A LTR ERV1 -2 341 1 17895 99 21 24 chr17 25965435 25967439 -59471041 - MER61A-int LTR ERV1 -45 5172 3133 2267 93 7 3 chr17 25967439 25967741 -59470739 + AluSq SINE Alu 1 303 -10 17895 99 21 24 chr17 25967741 25968647 -59469833 - MER61A-int LTR ERV1 -2084 3133 2226 1987 128 0 0 chr17 25968647 25968952 -59469528 - AluSg SINE Alu 0 305 1 1045 96 7 0 chr17 25968952 25969087 -59469393 - AluSq/x SINE Alu -177 136 1 2223 106 3 3 chr17 25969319 25969622 -59468858 - AluSg SINE Alu -7 303 1 2225 95 0 0 chr17 25969837 25970122 -59468358 + AluSx SINE Alu 9 293 -19 1243 179 33 5 chr17 25970401 25970613 -59467867 - MER20 DNA MER1_type 0 219 2 1554 165 0 118 chr17 25970860 25971200 -59467280 - AluJb SINE Alu -2 300 1 545 206 22 44 chr17 25971208 25971344 -59467136 - L1ME3 LINE L1 0 6162 6030 1266 204 119 15 chr17 25971350 25971619 -59466861 - AluJo SINE Alu -15 297 1 2026 142 0 3 chr17 25971773 25972075 -59466405 - AluJb SINE Alu -7 305 5 902 160 53 43 chr17 25972199 25972387 -59466093 - AluJo SINE Alu -10 302 113 740 139 0 0 chr17 25972447 25972548 -59465932 - AluJ/FLAM SINE Alu -210 102 2 1733 154 34 10 chr17 25972555 25972848 -59465632 - AluSx SINE Alu -12 300 1 1360 215 53 59 chr17 25972855 25973036 -59465444 - L1ME1 LINE L1 0 6184 6003 2164 129 3 3 chr17 25973036 25973345 -59465135 - AluSx SINE Alu -3 309 1 1360 215 53 59 chr17 25973345 25973641 -59464839 - L1ME1 LINE L1 -181 6003 5707 234 0 0 0 chr17 25973641 25973667 -59464813 + (TA)n Simple_repeat Simple_repeat 2 27 0 2456 77 3 0 chr17 25973667 25973965 -59464515 - AluY SINE Alu -12 299 1 1360 215 53 59 chr17 25973965 25973988 -59464492 - L1ME1 LINE L1 -475 5709 5652 533 177 89 0 chr17 25974459 25974583 -59463897 + MIR SINE MIR 80 214 -48 2213 113 0 7 chr17 25974583 25974885 -59463595 - AluSq SINE Alu -13 300 1 2343 76 9 22 chr17 25974952 25975267 -59463213 - AluSx SINE Alu -1 311 1 2839 9 0 13 chr17 25975408 25975723 -59462757 - AluYa5 SINE Alu 0 311 1 1956 159 0 3 chr17 25975723 25976025 -59462455 - AluSx SINE Alu -11 301 1 387 225 203 5 chr17 25976071 25976258 -59462222 - L1ME3 LINE L1 -1 6161 5938 312 27 0 0 chr17 25976322 25976359 -59462121 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 2214 128 0 0 chr17 25976370 25976675 -59461805 - AluSx SINE Alu -7 305 1 221 224 0 134 chr17 25977392 25977459 -59461021 - MIR SINE MIR -64 144 87 313 49 0 0 chr17 25977606 25977647 -59460833 - L1MB5 LINE L1 -7 6167 6127 1972 161 3 0 chr17 25977647 25977952 -59460528 + AluJb SINE Alu 1 306 -6 4948 126 48 15 chr17 25978066 25978370 -59460110 - Tigger1 DNA MER2_type -634 1784 1491 2259 101 3 3 chr17 25978370 25978666 -59459814 - AluSx SINE Alu -16 296 1 2390 83 0 6 chr17 25978675 25978989 -59459491 - AluSp SINE Alu -1 312 1 4948 126 48 15 chr17 25978989 25979468 -59459012 - Tigger1 DNA MER2_type -934 1484 965 478 131 0 0 chr17 25979469 25979530 -59458950 + AluS SINE Alu 3 63 -255 1830 216 111 43 chr17 25979818 25979830 -59458650 - L1 LINE L1 -2171 3975 3965 2223 107 7 0 chr17 25979830 25980130 -59458350 - AluSx SINE Alu -10 302 1 1830 216 111 43 chr17 25980130 25980485 -59457995 - L1 LINE L1 -2181 3965 3636 713 189 16 8 chr17 25980485 25980607 -59457873 + FLAM_A SINE Alu 1 123 -10 1830 216 111 43 chr17 25980607 25980868 -59457612 - L1 LINE L1 -2510 3636 3303 1561 80 10 0 chr17 25980875 25981075 -59457405 + AluSc SINE Alu 1 202 -107 1896 133 6 50 chr17 25981178 25981501 -59456979 + AluSg SINE Alu 1 309 -1 2196 124 13 0 chr17 25981509 25981807 -59456673 + AluSx SINE Alu 1 302 -10 1258 182 101 14 chr17 25982037 25982160 -59456320 - L1MB8 LINE L1 -5 6173 6062 2343 85 0 29 chr17 25982160 25982476 -59456004 - AluY SINE Alu -4 307 1 1258 182 101 14 chr17 25982476 25982649 -59455831 - L1MB8 LINE L1 -116 6062 5851 1908 178 76 29 chr17 25982655 25983044 -59455436 - L1MB8 LINE L1 -743 5403 4989 2283 101 0 3 chr17 25983044 25983342 -59455138 - AluSx SINE Alu -15 297 1 1908 178 76 29 chr17 25983342 25983397 -59455083 - L1MB8 LINE L1 -1157 4989 4938 233 248 134 9 chr17 25983381 25983552 -59454928 + L1MEc LINE L1 2147 2302 -4238 * 281 229 16 0 chr17 25985086 25985147 -59453333 - MER58 DNA MER1_type 0 2420 2359 283 349 0 0 chr17 25985183 25985266 -59453214 - MER58 DNA MER1_type -300 86 4 643 257 81 65 chr17 25985286 25985609 -59452871 - L1MC4 LINE L1 -90 7952 7625 262 361 78 43 chr17 25985855 25986226 -59452254 + L2 LINE L2 2508 2891 -423 2239 107 0 0 chr17 25986256 25986546 -59451934 + AluSg SINE Alu 1 290 -20 2197 114 8 36 chr17 25986810 25987169 -59451311 + L1MA3 LINE L1 5477 5825 -480 1538 105 44 22 chr17 25987169 25987397 -59451083 + AluSq SINE Alu 1 233 -80 1037 126 5 126 chr17 25987681 25987726 -59450754 + AluSg/x SINE Alu 92 141 -171 2009 123 0 75 chr17 25987726 25988060 -59450420 + AluSx SINE Alu 1 309 -3 1037 126 5 126 chr17 25988060 25988220 -59450260 + AluSg/x SINE Alu 141 272 -40 234 0 0 0 chr17 25988526 25988552 -59449928 + (T)n Simple_repeat Simple_repeat 1 26 0 292 252 77 68 chr17 25988737 25988846 -59449634 - L1M4 LINE L1 -2229 3917 3810 1991 133 25 0 chr17 25988846 25989132 -59449348 - AluSx SINE Alu -19 293 1 292 252 77 68 chr17 25989132 25989347 -59449133 - L1M4 LINE L1 -2336 3810 3590 2494 54 3 0 chr17 25989966 25990260 -59448220 - AluY SINE Alu -16 295 1 328 275 7 80 chr17 25990348 25990486 -59447994 - L1ME3A LINE L1 -38 6132 6005 245 27 54 0 chr17 25990492 25990529 -59447951 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2024 134 0 11 chr17 25990531 25990815 -59447665 - AluSx SINE Alu -31 281 1 2153 116 3 3 chr17 25990824 25991125 -59447355 - AluSx SINE Alu -11 301 1 2155 122 0 3 chr17 25991242 25991537 -59446943 - AluSx SINE Alu -18 294 1 792 129 0 9 chr17 25991789 25991905 -59446575 + FLAM_C SINE Alu 2 116 -17 22 0 0 0 chr17 25991923 25991945 -59446535 + AT_rich Low_complexity Low_complexity 1 22 0 2134 143 88 13 chr17 25991997 25992395 -59446085 - L1MB3 LINE L1 -2 6181 5754 237 299 52 31 chr17 25992783 25992880 -59445600 - MER5A DNA MER1_type -51 138 40 250 135 19 0 chr17 25993182 25993234 -59445246 + L1MB7 LINE L1 6132 6184 0 731 171 8 0 chr17 25993412 25993529 -59444951 - Tigger1 DNA MER2_type -1 2417 2300 801 105 60 60 chr17 25993530 25993663 -59444817 + AluSq/x SINE Alu 2 134 -178 5670 143 11 26 chr17 25993687 25994571 -59443909 + Tigger1 DNA MER2_type 1 872 -1546 2048 125 3 28 chr17 25994571 25994890 -59443590 + AluSx SINE Alu 1 311 -1 5670 143 11 26 chr17 25994890 25994919 -59443561 + Tigger1 DNA MER2_type 872 900 -1518 4895 206 34 63 chr17 25995019 25995862 -59442618 + L1MB4 LINE L1 3562 4428 -1718 2109 121 28 0 chr17 25995862 25996152 -59442328 + AluSx SINE Alu 1 298 -14 1693 109 0 0 chr17 25996153 25996383 -59442097 + AluY SINE Alu 82 311 0 4895 206 34 63 chr17 25996383 25996956 -59441524 + L1MB4 LINE L1 4428 4938 -1208 1730 162 0 35 chr17 25996956 25997271 -59441209 + AluJo SINE Alu 1 304 -8 4895 206 34 63 chr17 25997271 25997324 -59441156 + L1MB4 LINE L1 4938 4991 -1155 1135 111 0 7 chr17 25997324 25997506 -59440974 + AluSg/x SINE Alu 128 308 0 1076 154 0 6 chr17 25997522 25997684 -59440796 + AluSx SINE Alu 1 161 -151 2041 43 0 0 chr17 25997684 25997914 -59440566 + AluY SINE Alu 71 300 -11 533 163 0 0 chr17 25997916 25998008 -59440472 + L1MB5 LINE L1 5883 5974 -200 * 2454 185 40 12 chr17 25998003 25998521 -59439959 + L1MB4 LINE L1 5555 6087 -93 1848 171 3 0 chr17 25998797 25999139 -59439341 - AluJb SINE Alu 0 312 1 1670 183 0 14 chr17 26000257 26000563 -59437917 + AluJo SINE Alu 1 302 0 200 239 315 0 chr17 26000588 26000680 -59437800 + MIR SINE MIR 22 142 -120 1341 233 13 19 chr17 26000686 26000999 -59437481 + AluJo SINE Alu 1 311 -1 228 135 0 0 chr17 26001007 26001044 -59437436 + (GGAAA)n Simple_repeat Simple_repeat 3 39 0 334 240 50 20 chr17 26001054 26001154 -59437326 + MIR SINE MIR 157 259 -3 2311 110 0 0 chr17 26001214 26001514 -59436966 - AluSx SINE Alu -12 300 1 214 242 232 42 chr17 26001761 26001856 -59436624 + MIR3 SINE MIR 48 160 -48 182 384 51 36 chr17 26002016 26002154 -59436326 + L2 LINE L2 2970 3109 -163 207 0 0 0 chr17 26003094 26003117 -59435363 + (A)n Simple_repeat Simple_repeat 1 23 0 2142 110 3 0 chr17 26003117 26003433 -59435047 + AluSx SINE Alu 1 317 0 1811 158 7 28 chr17 26003434 26003725 -59434755 + AluSx SINE Alu 1 285 -27 1048 177 0 6 chr17 26003858 26004033 -59434447 + FAM SINE Alu 1 174 -1 2042 149 0 3 chr17 26004033 26004335 -59434145 + AluSq SINE Alu 1 301 -12 490 183 21 21 chr17 26004335 26004428 -59434052 - MER7A DNA MER2_type -255 91 1 343 267 0 9 chr17 26004429 26004534 -59433946 + L1M4 LINE L1 2854 2957 -3189 1599 90 0 0 chr17 26004534 26004735 -59433745 + AluY SINE Alu 3 203 -108 2096 221 74 67 chr17 26004735 26005672 -59432808 + L1M4 LINE L1 3081 4010 -2136 718 81 61 0 chr17 26005672 26005771 -59432709 + U6 snRNA snRNA 1 105 -2 1360 78 6 0 chr17 26005771 26005950 -59432530 + L1MA1 LINE L1 6123 6302 0 2096 221 74 67 chr17 26005950 26006491 -59431989 + L1M4 LINE L1 4009 4730 -1416 2167 106 10 0 chr17 26006947 26007239 -59431241 - AluSx SINE Alu -17 295 1 1026 99 0 0 chr17 26008167 26008298 -59430182 - AluSq/x SINE Alu -181 131 1 306 105 0 10 chr17 26008309 26008358 -59430122 - L1M4 LINE L1 -351 5815 5773 232 178 0 0 chr17 26008669 26008714 -59429766 + A-rich Low_complexity Low_complexity 1 45 0 1648 170 31 50 chr17 26008716 26009034 -59429446 + AluJb SINE Alu 1 312 0 243 0 0 0 chr17 26009382 26009409 -59429071 + (T)n Simple_repeat Simple_repeat 1 27 0 247 255 77 68 chr17 26009593 26009702 -59428778 - L1M4 LINE L1 -2229 3917 3810 2009 133 25 0 chr17 26009702 26009988 -59428492 - AluSx SINE Alu -19 293 1 247 255 77 68 chr17 26009988 26010203 -59428277 - L1M4 LINE L1 -2336 3810 3590 2522 54 3 0 chr17 26010822 26011116 -59427364 - AluY SINE Alu -16 295 1 322 275 7 80 chr17 26011204 26011342 -59427138 - L1ME3A LINE L1 -38 6132 6005 245 27 54 0 chr17 26011348 26011385 -59427095 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2071 130 0 11 chr17 26011387 26011671 -59426809 - AluSx SINE Alu -31 281 1 2287 102 3 10 chr17 26011682 26011996 -59426484 - AluSx SINE Alu 0 312 1 2175 122 0 3 chr17 26012113 26012408 -59426072 - AluSx SINE Alu -18 294 1 740 129 0 9 chr17 26012660 26012776 -59425704 + FLAM_C SINE Alu 2 116 -17 22 0 0 0 chr17 26012794 26012816 -59425664 + AT_rich Low_complexity Low_complexity 1 22 0 2044 143 82 12 chr17 26012868 26013268 -59425212 - L1MB3 LINE L1 -2 6181 5754 206 299 52 31 chr17 26013656 26013753 -59424727 - MER5A DNA MER1_type -51 138 40 242 135 19 0 chr17 26014055 26014107 -59424373 + L1MB7 LINE L1 6132 6184 0 725 171 8 0 chr17 26014284 26014401 -59424079 - Tigger1 DNA MER2_type -1 2417 2300 1639 108 0 14 chr17 26014401 26014624 -59423856 + AluSq SINE Alu 1 220 -93 615 177 0 0 chr17 26014627 26014723 -59423757 + AluSg/x SINE Alu 190 285 -25 12364 127 50 81 chr17 26014737 26014830 -59423650 - Tigger1 DNA MER2_type -111 2307 2213 2441 75 7 3 chr17 26014830 26015137 -59423343 - AluSc SINE Alu -1 308 1 12364 127 50 81 chr17 26015137 26015817 -59422663 - Tigger1 DNA MER2_type -205 2213 1514 2288 101 3 3 chr17 26015817 26016114 -59422366 - AluSx SINE Alu -15 297 1 2219 106 6 3 chr17 26016123 26016434 -59422046 - AluSp SINE Alu -1 312 1 12364 127 50 81 chr17 26016434 26016912 -59421568 - Tigger1 DNA MER2_type -912 1506 1015 831 143 0 30 chr17 26016912 26017045 -59421435 + FLAM_C SINE Alu 1 129 -4 12364 127 50 81 chr17 26017045 26017060 -59421420 - Tigger1 DNA MER2_type -1403 1015 1001 691 144 36 0 chr17 26017060 26017171 -59421309 + AluSg/x SINE Alu 186 300 -12 12364 127 50 81 chr17 26017171 26017274 -59421206 - Tigger1 DNA MER2_type -1417 1001 896 2068 125 3 28 chr17 26017274 26017593 -59420887 - AluSx SINE Alu -1 311 1 12364 127 50 81 chr17 26017593 26018478 -59420002 - Tigger1 DNA MER2_type -1522 896 1 2274 98 3 7 chr17 26018491 26018797 -59419683 - AluSc SINE Alu -4 305 1 22 35 0 0 chr17 26018798 26018827 -59419653 + AT_rich Low_complexity Low_complexity 1 29 0 1462 190 0 0 chr17 26018851 26019093 -59419387 + AluJb SINE Alu 36 277 -35 496 228 94 8 chr17 26020000 26020127 -59418353 + MIR SINE MIR 105 242 -20 885 216 138 16 chr17 26020170 26020391 -59418089 + MER2 DNA MER2_type 2 271 -73 2272 109 0 13 chr17 26020391 26020703 -59417777 - AluY SINE Alu -3 308 1 885 216 138 16 chr17 26020703 26020786 -59417694 + MER2 DNA MER2_type 271 343 -1 21 36 0 0 chr17 26020895 26020923 -59417557 + AT_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr17 26021025 26021060 -59417420 + AT_rich Low_complexity Low_complexity 1 35 0 35 41 0 0 chr17 26021147 26021196 -59417284 + AT_rich Low_complexity Low_complexity 1 49 0 335 351 24 6 chr17 26022167 26022332 -59416148 - MIR3 SINE MIR -5 203 36 1939 124 0 78 chr17 26022398 26022720 -59415760 + AluSx SINE Alu 1 297 -15 2343 113 0 3 chr17 26024146 26024456 -59414024 + AluSx SINE Alu 1 309 -3 1188 144 36 22 chr17 26024553 26024768 -59413712 + Charlie1 DNA MER1_type 1734 1954 -807 1795 108 8 4 chr17 26024768 26025019 -59413461 - AluSx SINE Alu -15 297 46 1820 144 7 20 chr17 26025047 26025346 -59413134 - AluJb SINE Alu -13 299 5 2428 87 3 0 chr17 26026195 26026494 -59411986 - AluSg SINE Alu -10 300 1 1443 164 36 75 chr17 26026671 26026976 -59411504 + AluJb SINE Alu 3 295 -17 1962 148 10 0 chr17 26027479 26027782 -59410698 - AluSx SINE Alu -6 306 1 1020 123 18 0 chr17 26027829 26027992 -59410488 + AluY SINE Alu 136 301 -10 1737 181 0 21 chr17 26028139 26028426 -59410054 + AluJb SINE Alu 1 281 -31 651 184 0 24 chr17 26028525 26028650 -59409830 + FLAM_A SINE Alu 4 125 -8 2170 129 3 0 chr17 26028779 26029074 -59409406 + AluSx SINE Alu 1 296 -16 232 184 158 26 chr17 26029261 26029337 -59409143 - MER91C DNA MER1_type -19 121 36 2379 64 40 0 chr17 26030569 26030865 -59407615 + AluY SINE Alu 1 308 -3 1836 165 0 14 chr17 26030932 26031238 -59407242 + AluJb SINE Alu 2 303 0 874 197 0 0 chr17 26031254 26031406 -59407074 + AluJb SINE Alu 144 295 -17 185 338 94 31 chr17 26031580 26031740 -59406740 - L3 LINE CR1 -7 1570 1401 2029 163 0 0 chr17 26032120 26032421 -59406059 - AluJb SINE Alu -11 301 1 704 164 19 6 chr17 26032427 26032586 -59405894 + CT-rich Low_complexity Low_complexity 3 163 0 2438 93 3 0 chr17 26032595 26032906 -59405574 - AluSp SINE Alu -1 312 1 1512 156 80 43 chr17 26033227 26033528 -59404952 - AluJb SINE Alu 0 312 1 1365 167 18 0 chr17 26033685 26033912 -59404568 - AluJb SINE Alu -81 231 1 2500 82 0 0 chr17 26034802 26035106 -59403374 - AluY SINE Alu -7 304 1 397 251 36 119 chr17 26037314 26037417 -59401063 + Charlie8 DNA MER1_type 10 120 -221 1615 150 29 25 chr17 26037417 26037691 -59400789 + AluJb SINE Alu 1 275 -37 210 37 0 0 chr17 26037698 26037725 -59400755 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 2309 85 0 0 chr17 26037732 26038045 -59400435 + AluSc SINE Alu 1 313 0 397 251 36 119 chr17 26038045 26038143 -59400337 + Charlie8 DNA MER1_type 132 210 -131 1237 189 0 0 chr17 26038724 26038915 -59399565 + AluJ SINE Alu 1 191 -121 609 181 0 51 chr17 26038986 26039124 -59399356 + AluJ SINE Alu 166 296 -16 1827 146 10 17 chr17 26039125 26039419 -59399061 + AluSx SINE Alu 1 292 -20 27 0 0 0 chr17 26039422 26039449 -59399031 + AT_rich Low_complexity Low_complexity 1 27 0 1835 146 14 24 chr17 26039489 26039783 -59398697 - AluJo SINE Alu -21 291 1 28 71 0 0 chr17 26041186 26041242 -59397238 + GC_rich Low_complexity Low_complexity 1 56 0 23 68 0 0 chr17 26041278 26041322 -59397158 + GC_rich Low_complexity Low_complexity 1 44 0 27 62 0 0 chr17 26041581 26041629 -59396851 + GC_rich Low_complexity Low_complexity 1 48 0 200 254 9 26 chr17 26042789 26042903 -59395577 + (CGGG)n Simple_repeat Simple_repeat 2 113 0 1891 121 44 0 chr17 26044092 26044365 -59394115 - AluSx SINE Alu -27 285 1 2241 86 3 16 chr17 26044593 26044896 -59393584 - AluY SINE Alu -12 299 1 2210 92 0 20 chr17 26044906 26045200 -59393280 - AluSx SINE Alu -24 288 1 1932 149 3 19 chr17 26045328 26045636 -59392844 - AluJb SINE Alu -7 305 3 1615 164 27 0 chr17 26045877 26046163 -59392317 - AluJo SINE Alu 0 306 14 324 0 0 0 chr17 26046246 26046282 -59392198 + (CA)n Simple_repeat Simple_repeat 2 37 0 7170 55 19 13 chr17 26047353 26048855 -59389625 + SVA Other Other 23 1376 -10 344 248 0 92 chr17 26048936 26049045 -59389435 + MER58 DNA MER1_type 1 99 -116 2593 57 0 0 chr17 26049052 26049352 -59389128 + AluY SINE Alu 2 301 -10 305 143 191 0 chr17 26049369 26049432 -59389048 + MER58 DNA MER1_type 2318 2392 -28 356 170 13 137 chr17 26049599 26049752 -59388728 - AluSq/x SINE Alu -166 136 3 2095 143 0 6 chr17 26050273 26050587 -59387893 - AluJb SINE Alu 0 312 1 2052 138 0 25 chr17 26050749 26051068 -59387412 + AluSx SINE Alu 1 311 -1 421 338 24 24 chr17 26051250 26051457 -59387023 + L1ME LINE L1 5526 5732 -2076 1668 137 0 12 chr17 26051479 26051720 -59386760 + AluSx SINE Alu 64 301 -11 235 235 0 0 chr17 26051728 26051779 -59386701 + L1ME LINE L1 5731 5781 -340 1143 126 0 0 chr17 26051828 26051979 -59386501 + AluSc SINE Alu 1 151 -158 183 42 0 0 chr17 26052131 26052155 -59386325 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2639 33 0 20 chr17 26052163 26052467 -59386013 + AluY SINE Alu 1 298 -13 829 141 0 8 chr17 26053615 26053743 -59384737 + AluSg/x SINE Alu 152 278 -32 210 37 0 0 chr17 26053743 26053770 -59384710 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2571 32 0 19 chr17 26053775 26054087 -59384393 + AluY SINE Alu 1 306 -5 1780 181 0 9 chr17 26054993 26055172 -59383308 - AluJo SINE Alu 0 312 136 2041 102 20 3 chr17 26055172 26055465 -59383015 - AluSx SINE Alu -14 298 1 1780 181 0 9 chr17 26055465 26055600 -59382880 - AluJo SINE Alu -176 136 1 721 212 0 0 chr17 26055609 26055741 -59382739 - FLAM_C SINE Alu 0 133 2 1559 172 10 23 chr17 26055788 26056090 -59382390 + AluJo SINE Alu 12 309 -3 2159 125 0 0 chr17 26056181 26056492 -59381988 - AluSx SINE Alu -1 311 1 2074 112 7 0 chr17 26056702 26056987 -59381493 + AluSx SINE Alu 1 287 -25 1183 143 21 149 chr17 26057574 26057910 -59380570 - AluJb SINE Alu -9 293 1 1854 134 7 0 chr17 26057912 26058202 -59380278 - AluSc SINE Alu -17 292 1 352 111 0 0 chr17 26058209 26058263 -59380217 - FAM SINE Alu 0 179 126 314 129 27 0 chr17 26058265 26058319 -59380161 - AluJo/FLAM SINE Alu -176 126 86 1955 137 6 6 chr17 26058335 26058648 -59379832 + AluSq SINE Alu 1 313 0 2011 116 10 3 chr17 26058667 26058961 -59379519 + AluSx SINE Alu 6 301 -11 2084 109 0 26 chr17 26059252 26059555 -59378925 - AluSx SINE Alu -17 295 1 959 141 17 23 chr17 26059727 26059904 -59378576 - AluJb SINE Alu -132 180 5 1765 123 0 105 chr17 26060024 26060366 -59378114 + AluSx SINE Alu 7 312 0 1194 249 112 28 chr17 26061744 26062243 -59376237 + L1M4 LINE L1 4591 5131 -1015 2482 199 51 0 chr17 26062264 26062756 -59375724 - L1MB5 LINE L1 -1 6173 5657 4355 148 38 15 chr17 26062777 26063568 -59374912 - L1MA7 LINE L1 -12 6279 5471 1338 154 9 5 chr17 26063577 26063798 -59374682 - AluSg/x SINE Alu -20 290 69 2224 103 0 0 chr17 26063798 26064100 -59374380 - AluSq SINE Alu -11 302 1 584 181 0 11 chr17 26064100 26064194 -59374286 - MER2 DNA MER2_type -252 93 1 353 188 0 0 chr17 26064217 26064286 -59374194 + L1ME2 LINE L1 6075 6143 -21 2256 83 6 13 chr17 26064818 26065132 -59373348 - AluSx SINE Alu 0 312 1 291 91 30 45 chr17 26065148 26065214 -59373266 + T-rich Low_complexity Low_complexity 4 68 0 1936 138 0 31 chr17 26065216 26065394 -59373086 - AluJb SINE Alu -3 309 144 1984 126 0 0 chr17 26065394 26065687 -59372793 - AluSx SINE Alu -15 297 5 1936 138 0 31 chr17 26065687 26065827 -59372653 - AluJb SINE Alu -168 144 1 2402 75 0 0 chr17 26066100 26066405 -59372075 - AluY SINE Alu -6 305 1 1560 182 14 0 chr17 26067076 26067356 -59371124 - AluJo SINE Alu -16 296 13 1691 167 0 13 chr17 26067466 26067765 -59370715 - AluJb SINE Alu -16 296 2 1278 160 9 124 chr17 26068080 26068418 -59370062 - AluJb SINE Alu -13 299 1 1700 176 58 3 chr17 26068418 26068765 -59369715 - L1MB4 LINE L1 -39 6141 5776 2020 85 4 7 chr17 26068766 26069037 -59369443 - AluSc SINE Alu -15 294 25 214 178 0 0 chr17 26069165 26069210 -59369270 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 2114 105 0 3 chr17 26069282 26069577 -59368903 - AluY SINE Alu -17 294 1 1508 173 10 23 chr17 26070108 26070408 -59368072 - AluJb SINE Alu -6 306 11 1613 167 10 26 chr17 26070465 26070770 -59367710 + AluJb SINE Alu 1 300 -12 833 177 38 0 chr17 26070999 26071157 -59367323 - AluSg/x SINE Alu -18 292 129 2297 86 0 13 chr17 26071157 26071471 -59367009 - AluSg SINE Alu 0 310 1 2311 81 0 0 chr17 26072151 26072448 -59366032 + AluY SINE Alu 1 297 -14 1946 124 0 3 chr17 26072454 26072734 -59365746 + AluSg SINE Alu 1 281 -29 180 0 0 0 chr17 26072734 26072754 -59365726 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 1842 127 0 27 chr17 26072773 26073072 -59365408 + AluSx SINE Alu 1 291 -21 1693 165 16 13 chr17 26073289 26073592 -59364888 + AluJo SINE Alu 4 307 -5 2155 95 0 16 chr17 26073597 26073913 -59364567 + AluY SINE Alu 1 311 0 511 185 108 0 chr17 26074592 26074722 -59363758 - L1ME4a LINE L1 0 6121 5978 2037 113 0 13 chr17 26074727 26075029 -59363451 - AluSx SINE Alu -5 307 10 1230 147 13 108 chr17 26075161 26075467 -59363013 + AluSx SINE Alu 12 288 -24 545 130 0 0 chr17 26075839 26075916 -59362564 + AluSp/q SINE Alu 220 296 -17 2191 78 7 0 chr17 26075916 26076234 -59362246 + AluSp SINE Alu 1 320 0 2328 76 3 0 chr17 26077642 26077945 -59360535 + AluY SINE Alu 1 304 -7 2119 120 0 0 chr17 26078233 26078534 -59359946 - AluSx SINE Alu -11 301 1 857 229 36 52 chr17 26079418 26079445 -59359035 + MIR SINE MIR 7 33 -229 2286 68 0 0 chr17 26079445 26079739 -59358741 + AluY SINE Alu 1 294 -17 857 229 36 52 chr17 26079739 26079960 -59358520 + MIR SINE MIR 33 251 -11 1162 101 0 6 chr17 26080288 26080456 -59358024 - AluSg/x SINE Alu -17 295 129 2219 93 0 3 chr17 26080478 26080789 -59357691 - AluY SINE Alu -1 310 1 1119 131 5 26 chr17 26080819 26081010 -59357470 + L1PB4 LINE L1 5968 6154 -2 215 271 0 0 chr17 26081875 26081923 -59356557 + (TA)n Simple_repeat Simple_repeat 2 49 0 319 28 0 0 chr17 26082233 26082269 -59356211 + U2 snRNA snRNA 1 36 -152 183 42 0 0 chr17 26083175 26083199 -59355281 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 188 197 0 16 chr17 26085306 26085367 -59353113 + (TATG)n Simple_repeat Simple_repeat 3 62 0 23 0 0 0 chr17 26087547 26087570 -59350910 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr17 26088823 26088844 -59349636 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 22 35 0 0 chr17 26089605 26089634 -59348846 + AT_rich Low_complexity Low_complexity 1 29 0 2052 85 39 0 chr17 26090686 26090964 -59347516 + AluSx SINE Alu 3 292 -16 228 35 0 0 chr17 26090964 26090993 -59347487 + (TA)n Simple_repeat Simple_repeat 1 29 0 1644 95 25 104 chr17 26091392 26091709 -59346771 + AluYb8 SINE Alu 1 292 -26 270 0 0 0 chr17 26091713 26091743 -59346737 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1180 68 43 0 chr17 26091743 26091905 -59346575 + AluSc SINE Alu 126 294 -15 298 282 97 0 chr17 26100658 26100761 -59337719 + L2 LINE L2 2595 2707 -607 1510 139 91 15 chr17 26100850 26101124 -59337356 + AluJo SINE Alu 1 295 -17 496 268 87 0 chr17 26101126 26101264 -59337216 - MIR SINE MIR -48 214 65 470 313 43 19 chr17 26101425 26101633 -59336847 + L2 LINE L2 3055 3267 -5 2322 61 6 22 chr17 26102153 26102465 -59336015 - AluSp SINE Alu -6 307 1 450 240 0 25 chr17 26103761 26103882 -59334598 - MIR SINE MIR -94 168 51 333 234 0 90 chr17 26104565 26104676 -59333804 - MIR3 SINE MIR -47 161 61 226 321 82 37 chr17 26105038 26105172 -59333308 - MIR SINE MIR -1 261 122 248 316 0 0 chr17 26105654 26105730 -59332750 - MIR SINE MIR -129 133 58 512 16 0 0 chr17 26106346 26106409 -59332071 - AluY SINE Alu -9 301 239 659 228 35 53 chr17 26107469 26107587 -59330893 + L1ME3 LINE L1 5932 6046 -116 1345 97 46 84 chr17 26107587 26107825 -59330655 - MER30 DNA MER1_type 0 230 2 659 228 35 53 chr17 26107825 26107934 -59330546 + L1ME3 LINE L1 6046 6155 -7 266 311 22 33 chr17 26108695 26108785 -59329695 - L2 LINE L2 -14 3258 3170 271 363 48 30 chr17 26109028 26109196 -59329284 - MIR3 SINE MIR 0 208 38 33 66 0 0 chr17 26110648 26110709 -59327771 + GC_rich Low_complexity Low_complexity 1 61 0 47 53 0 0 chr17 26110804 26110879 -59327601 + GC_rich Low_complexity Low_complexity 1 75 0 253 209 27 45 chr17 26110884 26110994 -59327486 + (CCCG)n Simple_repeat Simple_repeat 4 111 0 30 45 0 0 chr17 26111069 26111113 -59327367 + GC_rich Low_complexity Low_complexity 1 44 0 271 285 133 46 chr17 26113563 26113714 -59324766 - MIR SINE MIR -71 191 28 33 85 0 0 chr17 26114597 26114679 -59323801 + GC_rich Low_complexity Low_complexity 1 82 0 267 163 48 48 chr17 26114782 26114948 -59323532 + (CCGCG)n Simple_repeat Simple_repeat 5 170 0 26 0 0 0 chr17 26114968 26114994 -59323486 + GC_rich Low_complexity Low_complexity 1 26 0 25 90 0 0 chr17 26115135 26115202 -59323278 + GC_rich Low_complexity Low_complexity 1 67 0 205 274 32 16 chr17 26116587 26116649 -59321831 - L2 LINE L2 -65 3248 3186 31 26 0 0 chr17 26119675 26119713 -59318767 + AT_rich Low_complexity Low_complexity 1 38 0 274 277 158 28 chr17 26119714 26119891 -59318589 - HAL1 LINE L1 0 2507 2308 263 120 0 20 chr17 26119891 26119941 -59318539 + (TCCC)n Simple_repeat Simple_repeat 3 51 0 1978 134 3 16 chr17 26119941 26120247 -59318233 - AluJb SINE Alu 0 312 11 461 272 283 25 chr17 26120326 26120609 -59317871 - L2 LINE L2 0 3313 2958 702 303 98 25 chr17 26120655 26120972 -59317508 - L2 LINE L2 -527 2787 2448 768 274 138 73 chr17 26121144 26121274 -59317206 - HAL1 LINE L1 -1488 1019 899 2596 45 0 0 chr17 26121274 26121585 -59316895 - AluY SINE Alu 0 311 1 768 274 138 73 chr17 26121585 26122316 -59316164 - HAL1 LINE L1 -1608 899 102 1803 142 27 3 chr17 26122332 26122628 -59315852 - AluJb SINE Alu -9 303 1 2291 90 0 0 chr17 26122633 26122933 -59315547 - AluSx SINE Alu -12 300 1 1489 244 60 101 chr17 26122947 26123468 -59315012 - L1MEc LINE L1 -4593 1803 1262 1284 224 173 43 chr17 26123468 26123525 -59314955 - MLT1D LTR MaLR -1 504 456 2523 53 0 0 chr17 26123525 26123825 -59314655 + AluY SINE Alu 1 300 -11 1284 224 173 43 chr17 26123825 26124213 -59314267 - MLT1D LTR MaLR -49 456 1 1489 244 60 101 chr17 26124213 26124250 -59314230 - L1MEc LINE L1 -5134 1262 1225 2219 106 3 6 chr17 26124250 26124561 -59313919 - AluSg SINE Alu 0 310 1 1489 244 60 101 chr17 26124561 26124672 -59313808 - L1MEc LINE L1 -5171 1225 1111 1589 122 39 16 chr17 26124672 26124828 -59313652 - AluJo SINE Alu -30 282 116 234 0 0 0 chr17 26124828 26124854 -59313626 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1589 122 39 16 chr17 26124854 26124951 -59313529 - AluJo SINE Alu -196 116 23 1489 244 60 101 chr17 26124951 26125281 -59313199 - L1MEc LINE L1 -5285 1111 843 835 153 21 47 chr17 26125281 26125471 -59313009 - AluJb SINE Alu -6 306 122 1129 290 59 57 chr17 26125471 26125628 -59312852 - L1MEc LINE L1 -5558 838 683 1937 140 3 3 chr17 26125628 26125920 -59312560 - AluJb SINE Alu -20 292 1 1129 290 59 57 chr17 26125920 26125941 -59312539 - L1MEc LINE L1 -5713 683 664 2257 109 0 3 chr17 26125941 26126254 -59312226 - AluSx SINE Alu 0 312 1 1129 290 59 57 chr17 26126254 26126753 -59311727 - L1MEc LINE L1 -5732 664 159 330 330 22 0 chr17 26126801 26126892 -59311588 - L1MC4 LINE L1 -1336 6706 6614 1120 138 11 11 chr17 26126893 26127074 -59311406 - AluJb SINE Alu -27 285 105 886 150 6 60 chr17 26127205 26127372 -59311108 - AluJb SINE Alu -132 180 23 1795 163 7 0 chr17 26127433 26127722 -59310758 + AluSx SINE Alu 3 293 -19 383 319 38 6 chr17 26127726 26127883 -59310597 - L2 LINE L2 -254 3059 2898 1835 126 51 10 chr17 26128167 26128299 -59310181 + AluSx SINE Alu 1 126 -186 2344 74 0 7 chr17 26128299 26128597 -59309883 + AluY SINE Alu 1 296 -15 1835 126 51 10 chr17 26128597 26128757 -59309723 + AluSx SINE Alu 126 305 -7 2082 123 7 0 chr17 26128786 26129087 -59309393 + AluSp SINE Alu 1 303 -10 1096 171 0 0 chr17 26129087 26129263 -59309217 + AluSg/x SINE Alu 134 309 -3 2152 83 3 17 chr17 26129328 26129637 -59308843 + AluSp SINE Alu 1 305 0 1650 132 0 98 chr17 26130037 26130256 -59308224 - AluY SINE Alu 0 311 149 2278 93 3 0 chr17 26130256 26130567 -59307913 - AluSp SINE Alu -1 312 1 1650 132 0 98 chr17 26130567 26130703 -59307777 - AluY SINE Alu -162 149 1 2124 110 0 0 chr17 26130794 26131107 -59307373 - AluSx SINE Alu 0 312 1 947 194 5 38 chr17 26131118 26131329 -59307151 + L1PB4 LINE L1 5951 6154 -2 297 107 0 36 chr17 26131653 26131709 -59306771 + FAM SINE Alu 126 179 0 2044 130 0 16 chr17 26131724 26132039 -59306441 + AluSx SINE Alu 3 312 0 531 289 254 3 chr17 26133229 26133544 -59304936 + L2 LINE L2 2920 3313 0 272 174 0 72 chr17 26134587 26134656 -59303824 - MIR SINE MIR -69 193 130 718 250 35 6 chr17 26134680 26134852 -59303628 - MIR SINE MIR -70 192 16 2210 84 10 3 chr17 26134868 26135166 -59303314 + AluSx SINE Alu 1 300 -12 499 236 32 8 chr17 26135341 26135464 -59303016 + L2 LINE L2 3175 3300 -13 273 57 0 0 chr17 26135464 26135499 -59302981 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 478 287 44 11 chr17 26135842 26136023 -59302457 + MER117 DNA MER1_type 8 194 -3 211 287 217 11 chr17 26141369 26141558 -59296922 - MIR SINE MIR -8 254 20 271 279 23 0 chr17 26144905 26144991 -59293489 - MIR SINE MIR -68 140 53 779 229 21 54 chr17 26149183 26149248 -59289232 - MIR SINE MIR -30 232 166 2154 118 0 13 chr17 26149248 26149562 -59288918 + AluSx SINE Alu 1 310 -2 779 229 21 54 chr17 26149562 26149736 -59288744 - MIR SINE MIR -96 166 1 214 195 0 0 chr17 26151220 26151261 -59287219 + A-rich Low_complexity Low_complexity 1 41 0 221 0 35 0 chr17 26152881 26152910 -59285570 + (GA)n Simple_repeat Simple_repeat 2 31 0 2412 67 0 0 chr17 26159497 26159804 -59278676 - AluSc SINE Alu 0 307 1 2180 99 7 3 chr17 26159873 26160155 -59278325 - AluSg SINE Alu -27 283 1 2498 50 0 17 chr17 26160361 26160661 -59277819 - AluY SINE Alu -16 295 1 23 0 0 0 chr17 26160776 26160799 -59277681 + AT_rich Low_complexity Low_complexity 1 23 0 370 271 91 104 chr17 26161886 26162065 -59276415 + L1ME4a LINE L1 5373 5553 -2255 1602 137 60 4 chr17 26162065 26162314 -59276166 - AluSx SINE Alu -10 302 40 370 271 91 104 chr17 26162314 26162452 -59276028 + L1ME4a LINE L1 5553 5691 -2117 1950 147 6 10 chr17 26162452 26162765 -59275715 + AluJb SINE Alu 1 312 0 370 271 91 104 chr17 26162765 26162786 -59275694 + L1ME4a LINE L1 5691 5711 -2097 2216 119 0 3 chr17 26162786 26163096 -59275384 + AluSx SINE Alu 1 309 -3 370 271 91 104 chr17 26163096 26163205 -59275275 + L1ME4a LINE L1 5711 5816 -1992 315 270 31 43 chr17 26163364 26163465 -59275015 + L1ME4a LINE L1 5960 6061 -60 477 0 0 0 chr17 26163465 26163518 -59274962 + (CA)n Simple_repeat Simple_repeat 2 54 0 1636 135 35 42 chr17 26163518 26163802 -59274678 - AluJo SINE Alu -30 282 1 315 270 31 43 chr17 26163802 26163867 -59274613 + L1ME4a LINE L1 6059 6120 -1 2607 43 7 3 chr17 26165029 26165332 -59273148 - AluY SINE Alu -7 304 1 252 164 18 0 chr17 26165812 26165867 -59272613 - L1ME3 LINE L1 -211 5951 5896 1594 106 0 5 chr17 26165960 26166167 -59272313 - AluSx SINE Alu -106 206 1 31 0 0 0 chr17 26166548 26166579 -59271901 + AT_rich Low_complexity Low_complexity 1 31 0 576 103 0 0 chr17 26166581 26166659 -59271821 - U6 snRNA snRNA -29 78 1 443 157 11 67 chr17 26166797 26166886 -59271594 + FLAM_A SINE Alu 18 101 -41 24 0 0 0 chr17 26166894 26166918 -59271562 + AT_rich Low_complexity Low_complexity 1 24 0 257 288 104 24 chr17 26168234 26168359 -59270121 + MLT1L LTR MaLR 5 139 -476 890 99 25 0 chr17 26168369 26168490 -59269990 - AluY SINE Alu -15 296 173 1907 110 4 4 chr17 26168493 26168748 -59269732 - AluSq SINE Alu -58 255 1 1092 246 144 50 chr17 26169076 26169481 -59268999 + LTR33 LTR ERVL 10 468 -53 2240 74 33 0 chr17 26169481 26169788 -59268692 + AluSc SINE Alu 1 316 0 1092 246 144 50 chr17 26169788 26169844 -59268636 + LTR33 LTR ERVL 468 517 -4 354 299 73 6 chr17 26170111 26170275 -59268205 - MIR SINE MIR -68 194 20 2254 104 0 0 chr17 26171465 26171752 -59266728 - AluSg SINE Alu -23 287 1 2312 64 43 0 chr17 26171947 26172229 -59266251 + AluY SINE Alu 1 294 -17 584 141 0 0 chr17 26172240 26172332 -59266148 + AluSg/x SINE Alu 217 308 -4 255 240 0 0 chr17 26172571 26172621 -59265859 - MER66B LTR ERV1 -138 348 299 2243 98 10 0 chr17 26172626 26172922 -59265558 - AluSq SINE Alu -14 299 1 354 315 62 15 chr17 26173524 26173654 -59264826 - L2 LINE L2 -1 3271 3136 1109 112 0 0 chr17 26173672 26173815 -59264665 + AluSq/x SINE Alu 1 143 -169 2273 101 0 7 chr17 26173816 26174112 -59264368 + AluSg SINE Alu 1 294 -16 268 250 173 10 chr17 26174144 26174248 -59264232 - MER96 DNA MER1_type? -46 129 9 1080 165 46 60 chr17 26174380 26174598 -59263882 - AluJb SINE Alu -52 260 46 325 244 159 28 chr17 26174785 26174961 -59263519 + L3b LINE CR1 1317 1515 -68 268 295 150 10 chr17 26175318 26175511 -59262969 - L3b LINE CR1 -201 1382 1163 28 0 0 0 chr17 26176782 26176810 -59261670 + AT_rich Low_complexity Low_complexity 1 28 0 2346 91 3 0 chr17 26176818 26177115 -59261365 + AluSq SINE Alu 1 298 -15 829 232 6 0 chr17 26177115 26177292 -59261188 + L1MB8 LINE L1 5556 5733 -445 903 197 35 5 chr17 26177324 26177527 -59260953 + L1MB8 LINE L1 5970 6178 0 2104 115 3 16 chr17 26177600 26177913 -59260567 - AluSg SINE Alu -1 309 1 22 0 0 0 chr17 26177916 26177938 -59260542 + AT_rich Low_complexity Low_complexity 1 22 0 2175 130 0 3 chr17 26178546 26178845 -59259635 - AluSx SINE Alu -14 298 1 180 286 0 0 chr17 26179012 26179054 -59259426 - MIR SINE MIR -133 75 34 262 248 95 29 chr17 26179133 26179238 -59259242 - L2 LINE L2 -2 3270 3159 307 227 125 0 chr17 26179806 26179894 -59258586 + L2 LINE L2 3169 3267 -5 2477 66 3 3 chr17 26180057 26180360 -59258120 - AluY SINE Alu -8 303 1 256 296 61 38 chr17 26180691 26180823 -59257657 - MIR SINE MIR -48 214 80 520 258 60 11 chr17 26180895 26181077 -59257403 + L2 LINE L2 3115 3305 -8 2202 107 0 3 chr17 26181142 26181433 -59257047 - AluSg SINE Alu -20 290 1 629 194 105 144 chr17 26181622 26181939 -59256541 - L1MC4 LINE L1 -85 7957 7629 2005 133 35 0 chr17 26181939 26182224 -59256256 - AluSx SINE Alu -17 295 1 2345 80 7 7 chr17 26182227 26182526 -59255954 - AluSq SINE Alu -14 299 1 1979 122 40 16 chr17 26182533 26182836 -59255644 - AluJo SINE Alu -2 310 1 629 194 105 144 chr17 26182836 26182965 -59255515 - L1MC4 LINE L1 -421 7621 7517 2274 90 10 13 chr17 26182967 26183267 -59255213 - AluSp SINE Alu -14 299 1 990 189 6 0 chr17 26183270 26183439 -59255041 - FAM SINE Alu -5 170 1 8394 90 8 9 chr17 26183606 26184719 -59253761 - HERV9 LTR ERV1 -6126 2273 1162 247 335 99 17 chr17 26184839 26185145 -59253335 + L2 LINE L2 2719 3053 -219 219 346 13 0 chr17 26185307 26185385 -59253095 + L2 LINE L2 3229 3307 -6 1926 125 20 27 chr17 26186650 26186945 -59251535 - AluJo SINE Alu -19 293 1 31 26 0 0 chr17 26186948 26186986 -59251494 + AT_rich Low_complexity Low_complexity 1 38 0 1182 82 0 0 chr17 26187396 26187542 -59250938 + AluSp/q SINE Alu 163 308 -5 480 212 95 78 chr17 26187583 26187866 -59250614 - L1MC4a LINE L1 -1780 6028 5741 1280 210 93 3 chr17 26187869 26188160 -59250320 - L1MC4a LINE L1 -2166 5642 5326 2255 73 3 18 chr17 26188171 26188477 -59250003 - AluY SINE Alu 0 302 1 2285 99 3 0 chr17 26188493 26188777 -59249703 - AluSc SINE Alu -24 285 1 243 309 32 49 chr17 26188828 26188919 -59249561 + MIR SINE MIR 26 116 -146 2295 102 0 3 chr17 26188919 26189214 -59249266 - AluSc SINE Alu -15 294 1 243 309 32 49 chr17 26189214 26189245 -59249235 + MIR SINE MIR 116 146 -116 546 85 0 0 chr17 26189507 26189589 -59248891 + AluSp/q SINE Alu 228 309 -4 1194 20 34 7 chr17 26191134 26191281 -59247199 - L1PA13 LINE L1 -2 6161 6011 1511 134 17 70 chr17 26192228 26192527 -59245953 + L1MC1 LINE L1 6039 6321 -12 2146 107 28 3 chr17 26192601 26192891 -59245589 + AluSg SINE Alu 1 297 -13 831 193 7 7 chr17 26193009 26193159 -59245321 - FRAM SINE Alu -26 150 1 2223 77 40 10 chr17 26194083 26194380 -59244100 - AluSg SINE Alu -4 306 1 253 268 179 8 chr17 26194547 26194670 -59243810 - MIR SINE MIR -26 236 93 233 29 0 29 chr17 26194702 26194737 -59243743 + (TC)n Simple_repeat Simple_repeat 1 34 0 1859 138 0 24 chr17 26194744 26195033 -59243447 - AluJo SINE Alu -30 282 1 2024 137 10 3 chr17 26197397 26197703 -59240777 + AluSx SINE Alu 1 308 -4 2304 90 0 57 chr17 26197865 26198197 -59240283 + AluSq SINE Alu 1 313 0 405 254 62 15 chr17 26198200 26198330 -59240150 + MER103 DNA DNA 2 137 -29 2513 68 0 0 chr17 26199431 26199738 -59238742 - AluY SINE Alu -4 307 1 1029 188 140 0 chr17 26199820 26200027 -59238453 - AluJo SINE Alu -76 236 1 1879 135 38 3 chr17 26200076 26200364 -59238116 + AluSx SINE Alu 1 298 -14 2411 79 7 0 chr17 26200767 26201070 -59237410 - AluSp SINE Alu -8 305 1 1991 145 7 3 chr17 26201120 26201424 -59237056 - AluSx SINE Alu -7 305 1 2280 92 7 3 chr17 26201468 26201772 -59236708 - AluSq SINE Alu -8 305 1 1794 157 7 10 chr17 26202107 26202401 -59236079 + AluJb SINE Alu 11 303 -9 1111 179 77 77 chr17 26203236 26203600 -59234880 + MLT1A1 LTR MaLR 3 428 -4 22 35 0 0 chr17 26204110 26204139 -59234341 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17 26204170 26204205 -59234275 + AT_rich Low_complexity Low_complexity 1 35 0 268 176 44 15 chr17 26204695 26204763 -59233717 - L1MD3 LINE L1 0 7995 7926 2216 133 0 0 chr17 26204764 26205066 -59233414 - AluJb SINE Alu -10 302 1 480 261 24 29 chr17 26205084 26205291 -59233189 - L1MC4 LINE L1 -150 7892 7687 314 247 35 0 chr17 26205316 26205401 -59233079 - L1M4 LINE L1 -2735 3411 3324 436 221 52 0 chr17 26205405 26205541 -59232939 - L1M4 LINE L1 -2959 3187 3045 1012 190 112 72 chr17 26205555 26205672 -59232808 - MER2 DNA MER2_type -2 343 232 2117 104 3 7 chr17 26205672 26205993 -59232487 - AluSp SINE Alu 0 320 1 1012 190 112 72 chr17 26205993 26206195 -59232285 - MER2 DNA MER2_type -113 232 10 1113 242 28 3 chr17 26206210 26206499 -59231981 - L1MC4 LINE L1 -509 7533 7238 1513 200 214 16 chr17 26206501 26207005 -59231475 - L1MC4 LINE L1 -958 7084 6481 2383 100 10 0 chr17 26207006 26207315 -59231165 - AluSx SINE Alu 0 312 1 2002 136 3 17 chr17 26207635 26207936 -59230544 - AluSx SINE Alu -15 297 1 1969 147 0 10 chr17 26207977 26208270 -59230210 - AluJo SINE Alu -14 298 9 1638 208 0 7 chr17 26208633 26208927 -59229553 - AluJo SINE Alu -20 292 1 26 74 0 0 chr17 26208997 26209051 -59229429 + AT_rich Low_complexity Low_complexity 1 54 0 2049 115 0 43 chr17 26209392 26209697 -59228783 + AluSx SINE Alu 16 307 -5 277 187 66 44 chr17 26209717 26209808 -59228672 - MER3 DNA MER1_type 0 209 117 1800 177 0 0 chr17 26210908 26211208 -59227272 + AluJb SINE Alu 5 304 -8 278 235 0 88 chr17 26211420 26211522 -59226958 + MER31A LTR ERV1 353 445 -40 26 30 0 0 chr17 26211525 26211558 -59226922 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr17 26212098 26212128 -59226352 + AT_rich Low_complexity Low_complexity 1 30 0 2180 95 0 3 chr17 26212281 26212605 -59225875 - AluSx SINE Alu 0 323 1 180 273 0 0 chr17 26213112 26213156 -59225324 + MIR SINE MIR 217 260 -2 357 221 79 16 chr17 26213209 26213336 -59225144 + L1ME4a LINE L1 5957 6091 -30 523 270 67 29 chr17 26213546 26213623 -59224857 - MIR SINE MIR -39 223 150 2364 96 0 3 chr17 26213623 26213925 -59224555 - AluSq SINE Alu -12 301 1 523 270 67 29 chr17 26213925 26214061 -59224419 - MIR SINE MIR -112 150 8 1744 181 3 22 chr17 26214128 26214443 -59224037 - AluJb SINE Alu -3 309 1 1760 109 71 24 chr17 26215213 26215507 -59222973 - MER1B DNA MER1_type 0 339 32 315 131 20 30 chr17 26216094 26216193 -59222287 - MER63 DNA MER1_type -100 962 865 2116 109 0 0 chr17 26216216 26216491 -59221989 - AluSx SINE Alu -37 275 1 1909 153 0 13 chr17 26216495 26216802 -59221678 - AluJb SINE Alu -9 303 1 1094 165 84 123 chr17 26267853 26267985 -59170495 - AluJo SINE Alu -38 274 138 207 0 0 0 chr17 26267985 26268008 -59170472 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 1094 165 84 123 chr17 26268008 26268160 -59170320 - AluJo SINE Alu -174 138 1 2137 114 0 19 chr17 26268192 26268507 -59169973 - AluSg SINE Alu -1 309 1 2164 117 20 0 chr17 26269206 26269505 -59168975 - AluSx SINE Alu -7 305 1 2285 108 23 0 chr17 26269609 26269914 -59168566 - AluSx SINE Alu 0 312 1 716 171 75 60 chr17 26269915 26270112 -59168368 - LTR8 LTR ERV1 -150 577 362 265 92 66 0 chr17 26270145 26270221 -59168259 + (TA)n Simple_repeat Simple_repeat 2 82 0 919 119 60 32 chr17 26270221 26270406 -59168074 - MLT2A1 LTR ERVL -40 404 215 4247 44 6 0 chr17 26270512 26271016 -59167464 - L1PA5 LINE L1 -58 6096 5590 194 262 0 0 chr17 26271016 26271058 -59167422 + MIR SINE MIR 89 130 -78 2520 71 0 3 chr17 26271067 26271378 -59167102 - AluY SINE Alu -1 310 1 242 284 0 25 chr17 26271378 26271459 -59167021 + MIR SINE MIR 112 190 -72 21 0 0 0 chr17 26272126 26272147 -59166333 + AT_rich Low_complexity Low_complexity 1 21 0 1837 165 26 0 chr17 26272258 26272561 -59165919 - AluJb SINE Alu -1 311 1 2454 78 0 0 chr17 26273254 26273563 -59164917 - AluY SINE Alu -2 309 1 21 0 0 0 chr17 26273904 26273925 -59164555 + AT_rich Low_complexity Low_complexity 1 21 0 1166 222 35 14 chr17 26274218 26274506 -59163974 + AluJb SINE Alu 1 294 -8 795 238 6 6 chr17 26274509 26274695 -59163785 + AluJo/FRAM SINE Alu 137 302 0 606 274 142 0 chr17 26274884 26275103 -59163377 + MIR SINE MIR 11 260 -2 243 346 112 0 chr17 26275178 26275285 -59163195 - MIR SINE MIR -90 172 54 32 0 0 0 chr17 26275343 26275375 -59163105 + AT_rich Low_complexity Low_complexity 1 32 0 1651 181 22 4 chr17 26275375 26275652 -59162828 - AluJo SINE Alu -30 282 1 1044 159 77 15 chr17 26275652 26275847 -59162633 - AluJo SINE Alu -8 304 98 1904 138 20 7 chr17 26276048 26276344 -59162136 + AluJb SINE Alu 1 300 -12 6847 82 11 4 chr17 26276636 26277942 -59160538 - L1PA11 LINE L1 -1 6173 4844 3253 162 164 41 chr17 26277942 26278786 -59159694 - MER52C LTR ERV1 -1 1277 16 1634 181 7 0 chr17 26278811 26279114 -59159366 - L1P LINE L1 -1297 4849 4545 1133 113 28 42 chr17 26279258 26279352 -59159128 - Tigger3b DNA MER2_type -2167 862 768 2026 130 3 19 chr17 26279352 26279659 -59158821 - AluSx SINE Alu -10 302 1 1133 113 28 42 chr17 26279659 26279776 -59158704 - Tigger3b DNA MER2_type -2261 768 654 2209 106 0 7 chr17 26279782 26280083 -59158397 + AluSx SINE Alu 1 299 -13 28 0 0 0 chr17 26280083 26280111 -59158369 + AT_rich Low_complexity Low_complexity 1 28 0 891 148 42 0 chr17 26280175 26280317 -59158163 - FRAM SINE Alu -30 146 1 1047 99 0 0 chr17 26280362 26280493 -59157987 + AluSc SINE Alu 1 131 -178 3247 139 58 23 chr17 26280507 26280762 -59157718 - Tigger3b DNA MER2_type -2454 574 329 2244 113 3 3 chr17 26280762 26281072 -59157408 + AluSp SINE Alu 1 310 -3 3247 139 58 23 chr17 26281072 26281371 -59157109 - Tigger3b DNA MER2_type -2699 329 1 487 321 59 41 chr17 26281378 26282177 -59156303 + L1M4 LINE L1 4188 5015 -1131 332 235 98 59 chr17 26282394 26282547 -59155933 + L1M LINE L1 5265 5423 -2385 664 246 181 0 chr17 26282553 26282752 -59155728 + MIR SINE MIR 14 248 -14 2070 111 3 14 chr17 26282764 26283061 -59155419 - AluSx SINE Alu -18 294 1 2148 83 35 7 chr17 26283145 26283434 -59155046 + AluSg SINE Alu 1 297 -13 1016 78 24 90 chr17 26283577 26283654 -59154826 + L1MA3 LINE L1 6146 6208 -97 2054 150 0 10 chr17 26283654 26283960 -59154520 - AluJb SINE Alu -9 303 1 1016 78 24 90 chr17 26283960 26284048 -59154432 + L1MA3 LINE L1 6208 6300 -5 22 56 0 0 chr17 26284049 26284085 -59154395 + AT_rich Low_complexity Low_complexity 1 36 0 210 343 171 0 chr17 26284387 26284492 -59153988 + MIR3 SINE MIR 11 133 -75 2024 103 0 0 chr17 26284634 26284947 -59153533 - AluSx SINE Alu 0 335 23 271 253 55 21 chr17 26285311 26285408 -59153072 + MIR SINE MIR 65 164 -67 2160 110 0 38 chr17 26287116 26287434 -59151046 - AluSg SINE Alu -4 306 1 2224 113 3 3 chr17 26288628 26288929 -59149551 + AluSx SINE Alu 1 301 -11 1984 125 7 0 chr17 26289048 26289329 -59149151 + AluSx SINE Alu 21 303 -9 2391 93 0 6 chr17 26289720 26290031 -59148449 + AluSc SINE Alu 1 309 0 2620 62 0 0 chr17 26290034 26290340 -59148140 + AluY SINE Alu 1 306 -5 443 236 245 14 chr17 26290505 26290721 -59147759 + L2 LINE L2 3044 3309 -4 261 302 170 19 chr17 26290773 26290879 -59147601 + MIR SINE MIR 23 144 -64 288 0 0 0 chr17 26291135 26291167 -59147313 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 203 133 0 0 chr17 26291915 26291945 -59146535 + (GGA)n Simple_repeat Simple_repeat 1 30 0 2329 88 3 3 chr17 26293160 26293457 -59145023 + AluSg1 SINE Alu 1 297 -12 2109 87 76 0 chr17 26295412 26295701 -59142779 + AluY SINE Alu 1 311 0 4565 44 2 18 chr17 26295708 26296256 -59142224 + L1PA8 LINE L1 5628 6166 -6 220 224 276 40 chr17 26296281 26296433 -59142047 - L2 LINE L2 -121 3192 3005 317 273 142 79 chr17 26296524 26296912 -59141568 - L2 LINE L2 -261 3011 2564 1202 138 15 10 chr17 26298034 26298230 -59140250 + L1MA3 LINE L1 4016 4212 -1934 1125 101 0 0 chr17 26298230 26298378 -59140102 + AluSq/x SINE Alu 1 148 -164 519 156 0 0 chr17 26298378 26298455 -59140025 - AluY SINE Alu -237 81 5 6169 137 16 4 chr17 26298456 26300190 -59138290 + L1MA3 LINE L1 4209 5969 -336 1574 68 5 0 chr17 26300303 26300495 -59137985 + AluY SINE Alu 105 297 -14 1881 159 0 10 chr17 26301339 26301651 -59136829 - AluJo SINE Alu 0 309 1 414 248 121 7 chr17 26302028 26302169 -59136311 + MER45A DNA AcHobo 22 178 0 22 35 0 0 chr17 26303929 26303958 -59134522 + AT_rich Low_complexity Low_complexity 1 29 0 695 280 83 36 chr17 26303968 26304344 -59134136 + L1ME4a LINE L1 5514 5907 -214 1893 127 10 7 chr17 26304360 26304652 -59133828 - AluSq SINE Alu -20 293 1 2106 128 10 3 chr17 26304662 26304968 -59133512 - AluY SINE Alu -1 310 3 213 65 0 0 chr17 26304998 26305029 -59133451 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1667 172 0 53 chr17 26305050 26305370 -59133110 - AluJo SINE Alu -7 305 3 1982 125 3 3 chr17 26305378 26305673 -59132807 - AluSx SINE Alu -17 295 1 1702 157 62 0 chr17 26305673 26305947 -59132533 - AluSx SINE Alu -15 297 7 321 89 0 0 chr17 26306628 26306673 -59131807 + (T)n Simple_repeat Simple_repeat 1 45 0 357 256 97 84 chr17 26306875 26307113 -59131367 - L1M2 LINE L1 -5899 950 710 342 0 0 0 chr17 26307602 26307640 -59130840 + (TG)n Simple_repeat Simple_repeat 2 39 0 2407 99 0 0 chr17 26307885 26308197 -59130283 - AluSx SINE Alu 0 312 1 390 341 38 8 chr17 26308537 26308669 -59129811 - MIR SINE MIR -108 154 19 2336 108 0 6 chr17 26309003 26309317 -59129163 + AluSx SINE Alu 1 312 0 425 272 131 7 chr17 26311617 26311900 -59126580 + L1M4 LINE L1 3720 4037 -2109 2881 109 18 13 chr17 26311999 26312457 -59126023 - Tigger3b DNA MER2_type 0 1231 772 1109 162 0 0 chr17 26312462 26312629 -59125851 - AluSc SINE Alu -10 299 133 1048 99 0 0 chr17 26312674 26312805 -59125675 + AluSc SINE Alu 1 131 -178 1584 106 51 0 chr17 26312819 26313074 -59125406 - Tigger3b DNA MER2_type -657 574 307 420 208 21 0 chr17 26313439 26313535 -59124945 - AluJ/FLAM SINE Alu -214 98 1 302 122 0 0 chr17 26313561 26313610 -59124870 + MADE1 DNA Mariner 1 49 -31 2302 140 30 14 chr17 26313614 26314043 -59124437 - L1MB3 LINE L1 -18 6165 5730 21 57 0 0 chr17 26315553 26315588 -59122892 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 26315706 26315728 -59122752 + GC_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 26316040 26316078 -59122402 + (TG)n Simple_repeat Simple_repeat 2 39 0 2223 91 0 3 chr17 26316085 26316381 -59122099 - AluSq SINE Alu -17 296 2 842 196 55 6 chr17 26316507 26316670 -59121810 + MER5B DNA MER1_type 1 171 -7 2279 109 0 3 chr17 26318148 26318451 -59120029 - AluSq SINE Alu -11 302 1 199 333 46 23 chr17 26319215 26319302 -59119178 + MIR SINE MIR 23 111 -97 393 304 245 0 chr17 26319451 26319635 -59118845 + MIR SINE MIR 2 230 -32 183 270 124 22 chr17 26319829 26319918 -59118562 + MIR SINE MIR 77 174 -88 2341 109 0 0 chr17 26319938 26320240 -59118240 + AluSx SINE Alu 1 302 -10 1498 126 146 0 chr17 26320414 26320668 -59117812 + AluJo SINE Alu 3 293 -9 24 32 0 0 chr17 26320668 26320699 -59117781 + AT_rich Low_complexity Low_complexity 1 31 0 183 80 0 0 chr17 26321564 26321589 -59116891 + (T)n Simple_repeat Simple_repeat 1 25 0 21 57 0 0 chr17 26321609 26321644 -59116836 + AT_rich Low_complexity Low_complexity 1 35 0 294 95 0 0 chr17 26321812 26321854 -59116626 + (CA)n Simple_repeat Simple_repeat 1 42 0 403 281 64 25 chr17 26321856 26322091 -59116389 - L1MC4a LINE L1 -1900 5908 5665 309 331 25 32 chr17 26322111 26322268 -59116212 - L1MC4a LINE L1 -437 5684 5529 1723 170 75 0 chr17 26322492 26322774 -59115706 - AluJo SINE Alu -9 303 1 898 136 0 0 chr17 26323135 26323267 -59115213 + FLAM_C SINE Alu 1 132 -1 506 216 239 6 chr17 26323283 26323450 -59115030 - MIR SINE MIR -56 206 1 2047 129 6 28 chr17 26324295 26324613 -59113867 - AluSx SINE Alu -1 311 1 2265 115 0 0 chr17 26324681 26324977 -59113503 - AluSx SINE Alu -16 296 1 556 228 56 71 chr17 26325106 26325303 -59113177 - MIR SINE MIR -47 215 22 202 310 0 0 chr17 26325533 26325591 -59112889 + L2 LINE L2 3254 3311 -2 262 235 0 44 chr17 26326342 26326410 -59112070 - MIR SINE MIR -80 182 118 234 246 215 92 chr17 26326381 26326450 -59112030 - MIR3 SINE MIR -62 146 87 * 1837 52 0 0 chr17 26326450 26326660 -59111820 - AluY SINE Alu -13 298 89 234 246 215 92 chr17 26326660 26326700 -59111780 - MIR3 SINE MIR -121 87 53 2396 183 63 58 chr17 26326700 26327216 -59111264 + MLT2B3 LTR ERVL 1 522 -32 702 48 29 0 chr17 26327216 26327319 -59111161 + (TCCA)n Simple_repeat Simple_repeat 2 107 0 2396 183 63 58 chr17 26327319 26327353 -59111127 + MLT2B3 LTR ERVL 522 554 0 234 246 215 92 chr17 26327353 26327372 -59111108 - MIR3 SINE MIR -155 53 1 25 90 0 0 chr17 26327546 26327613 -59110867 + AT_rich Low_complexity Low_complexity 1 67 0 2247 105 27 0 chr17 26327877 26328173 -59110307 - AluSp SINE Alu -9 304 1 2269 102 3 3 chr17 26328474 26328768 -59109712 - AluSq SINE Alu -19 294 1 742 165 0 0 chr17 26329484 26329617 -59108863 - AluJb SINE Alu -4 308 176 2281 101 0 26 chr17 26331133 26331439 -59107041 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 26331997 26332021 -59106459 + (A)n Simple_repeat Simple_repeat 1 24 0 2161 90 0 4 chr17 26332567 26332844 -59105636 + AluSx SINE Alu 5 280 -32 362 20 40 0 chr17 26332844 26332894 -59105586 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1227 141 0 0 chr17 26332895 26333072 -59105408 + AluSg/x SINE Alu 135 311 -1 247 48 24 24 chr17 26333308 26333350 -59105130 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 266 184 4 0 chr17 26333750 26333807 -59104673 + Alu SINE Alu 1 43 -259 2486 94 0 9 chr17 26333928 26334419 -59104061 - L1M1 LINE L1 -707 5598 5111 5863 113 13 5 chr17 26334429 26335634 -59102846 + L1MA2 LINE L1 4872 6092 -212 1776 164 21 7 chr17 26335634 26335915 -59102565 + AluJo SINE Alu 1 285 -27 5863 113 13 5 chr17 26335915 26335973 -59102507 + L1MA2 LINE L1 6092 6148 -156 2169 110 4 0 chr17 26335973 26336254 -59102226 + AluSp SINE Alu 1 282 -31 403 270 52 17 chr17 26336266 26336381 -59102099 + L2 LINE L2 3195 3313 0 1096 106 0 12 chr17 26337212 26337372 -59101108 - L1MC1 LINE L1 0 6333 6176 214 245 19 0 chr17 26337874 26337927 -59100553 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 195 250 23 0 chr17 26337937 26337981 -59100499 - L2 LINE L2 -11 3261 3217 1277 155 14 83 chr17 26337991 26338268 -59100212 - AluJo SINE Alu -54 258 1 218 140 0 20 chr17 26339264 26339314 -59099166 + (TTTC)n Simple_repeat Simple_repeat 2 50 0 2279 119 0 0 chr17 26339324 26339627 -59098853 - AluSg SINE Alu -7 303 1 189 0 0 0 chr17 26339762 26339783 -59098697 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 347 282 19 0 chr17 26340000 26340103 -59098377 + L1ME LINE L1 5529 5633 -488 2243 108 0 7 chr17 26340297 26340604 -59097876 + AluSg SINE Alu 1 305 -5 845 151 0 0 chr17 26340665 26340791 -59097689 - FLAM_C SINE Alu -7 126 1 495 176 20 20 chr17 26340833 26340935 -59097545 + U13 snRNA snRNA 1 102 -2 192 158 0 0 chr17 26340939 26340977 -59097503 + A-rich Low_complexity Low_complexity 1 38 0 286 277 86 72 chr17 26341524 26341802 -59096678 + L2 LINE L2 1527 1808 -1506 752 124 26 0 chr17 26341828 26341941 -59096539 - AluJb SINE Alu -196 116 1 771 343 119 29 chr17 26341964 26342727 -59095753 + L2 LINE L2 1825 2656 -658 187 328 0 0 chr17 26342816 26342874 -59095606 + MER5A DNA MER1_type 127 184 -5 207 0 0 0 chr17 26343176 26343199 -59095281 + (A)n Simple_repeat Simple_repeat 1 23 0 1136 195 53 38 chr17 26343202 26343459 -59095021 + MER21B LTR ERV1 25 286 -573 2725 80 11 3 chr17 26343459 26343820 -59094660 + THE1B LTR MaLR 1 364 0 2893 72 83 114 chr17 26343827 26344292 -59094188 + THE1B-int LTR MaLR 8 453 -1127 2343 113 0 0 chr17 26344292 26344593 -59093887 + AluSx SINE Alu 1 301 -11 2893 72 83 114 chr17 26344593 26344708 -59093772 + THE1B-int LTR MaLR 453 570 -1010 275 333 114 0 chr17 26344770 26344893 -59093587 - MIR3 SINE MIR -10 198 62 725 212 212 5 chr17 26345311 26345514 -59092966 + MIR SINE MIR 18 262 0 1900 169 0 3 chr17 26345782 26346066 -59092414 + AluJb SINE Alu 1 283 -29 1641 157 39 30 chr17 26346480 26346785 -59091695 + AluJb SINE Alu 1 308 -4 1581 173 54 38 chr17 26346861 26346994 -59091486 + L1MB8 LINE L1 4896 5025 -1121 2165 125 10 0 chr17 26346994 26347298 -59091182 + AluSx SINE Alu 3 309 -3 1581 173 54 38 chr17 26347298 26347591 -59090889 + L1MB8 LINE L1 5025 5329 -817 800 182 94 69 chr17 26347591 26347794 -59090686 + AluJo SINE Alu 82 289 -23 3534 171 77 10 chr17 26347812 26348613 -59089867 + L1MB8 LINE L1 5316 6173 -5 2182 82 0 0 chr17 26348613 26348881 -59089599 - AluSc SINE Alu -41 268 1 364 339 65 12 chr17 26349026 26349194 -59089286 - MER5A DNA MER1_type 0 189 13 594 120 10 0 chr17 26349272 26349372 -59089108 - MER51A LTR ERV1 -65 569 469 659 184 0 57 chr17 26349891 26350032 -59088448 - FLAM_A SINE Alu 0 133 1 294 176 118 0 chr17 26350381 26350449 -59088031 + HY5 scRNA scRNA 1 76 -8 28 29 0 0 chr17 26350449 26350484 -59087996 + AT_rich Low_complexity Low_complexity 1 35 0 577 336 69 30 chr17 26350540 26351078 -59087402 + L2 LINE L2 1498 2056 -1258 1599 183 38 44 chr17 26351142 26351509 -59086971 + MLT1A1 LTR MaLR 1 365 0 422 233 80 7 chr17 26351515 26351665 -59086815 + MER103 DNA DNA 6 166 0 341 243 322 20 chr17 26351942 26352094 -59086386 + MIR SINE MIR 65 262 0 188 377 88 31 chr17 26352095 26352178 -59086302 + L2 LINE L2 2239 2316 -998 1340 208 81 19 chr17 26352178 26352500 -59085980 + MER2 DNA MER2_type 2 343 -1 188 377 88 31 chr17 26352500 26352644 -59085836 + L2 LINE L2 2316 2479 -835 189 333 128 43 chr17 26352741 26352882 -59085598 + L2 LINE L2 2731 2883 -431 279 119 81 12 chr17 26353002 26353162 -59085318 + (TA)n Simple_repeat Simple_repeat 1 171 0 22 35 0 0 chr17 26353162 26353191 -59085289 + AT_rich Low_complexity Low_complexity 1 29 0 230 123 70 23 chr17 26353191 26353362 -59085118 + (TA)n Simple_repeat Simple_repeat 1 179 0 22 35 0 0 chr17 26353362 26353391 -59085089 + AT_rich Low_complexity Low_complexity 1 29 0 415 140 70 23 chr17 26353391 26353562 -59084918 + (TA)n Simple_repeat Simple_repeat 1 179 0 225 218 58 33 chr17 26353582 26354364 -59084116 + (TA)n Simple_repeat Simple_repeat 1 801 0 414 147 0 0 chr17 26354377 26354445 -59084035 - MER2 DNA MER2_type -228 117 50 37 29 0 43 chr17 26354445 26354515 -59083965 + AT_rich Low_complexity Low_complexity 1 67 0 203 302 174 0 chr17 26354790 26354876 -59083604 - L2 LINE L2 -5 3308 3208 200 227 0 0 chr17 26354915 26354959 -59083521 + (TA)n Simple_repeat Simple_repeat 1 44 0 18847 29 3 1 chr17 26355030 26359212 -59079268 + L1PA4 LINE L1 1967 6155 0 579 188 0 0 chr17 26359598 26359715 -59078765 + CT-rich Low_complexity Low_complexity 3 119 0 1605 174 7 24 chr17 26359720 26360007 -59078473 - AluJo SINE Alu -30 282 1 1975 135 7 0 chr17 26360826 26361107 -59077373 + AluSq SINE Alu 3 285 -28 269 159 16 0 chr17 26361114 26361177 -59077303 + (TA)n Simple_repeat Simple_repeat 2 65 0 40 21 0 0 chr17 26361177 26361224 -59077256 + AT_rich Low_complexity Low_complexity 1 47 0 354 278 112 29 chr17 26361224 26361429 -59077051 + MARNA DNA Mariner 27 248 -338 596 256 105 12 chr17 26361669 26361841 -59076639 + MARNA DNA Mariner 286 473 -113 6637 129 5 2 chr17 26361843 26362837 -59075643 + L1P LINE L1 3412 4408 -1738 638 110 0 10 chr17 26362937 26363037 -59075443 - L1 LINE L1 -1839 4307 4209 519 156 0 0 chr17 26363038 26363115 -59075365 + AluY SINE Alu 5 81 -237 1182 54 7 7 chr17 26363115 26363262 -59075218 - AluY SINE Alu -164 147 1 2308 126 0 0 chr17 26363621 26363930 -59074550 - AluSg SINE Alu -1 309 1 249 138 0 46 chr17 26363936 26364001 -59074479 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 2105 108 10 20 chr17 26364002 26364297 -59074183 - AluSx SINE Alu -20 292 1 230 266 255 0 chr17 26364454 26364548 -59073932 - L2 LINE L2 -5 3267 3150 209 308 46 0 chr17 26364559 26364624 -59073856 + L2 LINE L2 2603 2670 -644 411 156 31 0 chr17 26364673 26364737 -59073743 - LTR8 LTR ERV1 -102 589 524 2418 80 0 0 chr17 26364738 26365038 -59073442 - AluSx SINE Alu -12 300 1 1023 104 0 0 chr17 26365038 26365173 -59073307 - AluSq/x SINE Alu -177 135 1 711 176 75 60 chr17 26365174 26365371 -59073109 - LTR8 LTR ERV1 -150 577 362 265 92 66 0 chr17 26365404 26365480 -59073000 + (TA)n Simple_repeat Simple_repeat 1 81 0 2577 85 67 26 chr17 26365480 26365868 -59072612 - MLT2A1 LTR ERVL -40 404 1 482 127 14 0 chr17 26365868 26365938 -59072542 - LTR8A LTR ERV1 -345 382 312 2945 0 0 0 chr17 26365939 26366250 -59072230 + AluYa5 SINE Alu 1 311 0 2128 120 7 0 chr17 26366263 26366554 -59071926 + AluSx SINE Alu 1 293 -19 1317 97 0 11 chr17 26366597 26366772 -59071708 + AluSg/x SINE Alu 126 298 -14 307 182 18 0 chr17 26366772 26366827 -59071653 - LTR8A LTR ERV1 -407 320 265 213 333 85 16 chr17 26367183 26367312 -59071168 + L3b LINE CR1 1247 1384 -199 2170 121 0 10 chr17 26367648 26367954 -59070526 - AluSg SINE Alu -7 303 1 2464 60 0 0 chr17 26367961 26368262 -59070218 - AluY SINE Alu -10 301 1 1882 164 68 6 chr17 26368400 26368723 -59069757 + MER61A LTR ERV1 1 343 0 1355 148 121 12 chr17 26368828 26369084 -59069396 + AluJo SINE Alu 1 284 -28 5135 123 44 21 chr17 26369127 26369890 -59068590 - L1MB3 LINE L1 -1 6182 5395 1747 168 14 10 chr17 26369890 26370187 -59068293 - AluJo SINE Alu -14 298 1 5135 123 44 21 chr17 26370187 26370278 -59068202 - L1MB3 LINE L1 -788 5395 5308 1935 190 80 35 chr17 26370279 26370745 -59067735 + MLT2B1 LTR ERVL 1 534 -20 384 103 0 0 chr17 26370759 26370817 -59067663 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 315 122 0 189 chr17 26370818 26370892 -59067588 + MLT2D LTR ERVL 357 414 0 3075 195 30 8 chr17 26370921 26371581 -59066899 + MLT-int LTR MaLR 58 742 -629 284 196 18 116 chr17 26371620 26371732 -59066748 + MLT-int LTR MaLR 657 757 -978 1925 250 34 16 chr17 26371824 26372306 -59066174 + MLT1A2-int LTR MaLR 1203 1735 0 1437 210 72 35 chr17 26372306 26372654 -59065826 + MLT1A2 LTR MaLR 1 361 -13 672 163 79 63 chr17 26372659 26372849 -59065631 - L1 LINE L1 -843 5303 5111 2350 97 3 0 chr17 26372888 26373186 -59065294 - AluSx SINE Alu -13 299 1 2046 115 3 3 chr17 26373235 26373543 -59064937 - AluSx SINE Alu 0 309 2 1848 126 77 14 chr17 26374076 26374362 -59064118 - AluSg SINE Alu -6 304 1 2500 62 7 0 chr17 26374824 26375133 -59063347 - AluY SINE Alu 0 311 1 354 217 245 57 chr17 26375794 26375900 -59062580 - FLAM_A SINE Alu -6 127 2 281 287 26 35 chr17 26376553 26376668 -59061812 - MIR SINE MIR -1 261 148 375 254 9 26 chr17 26376761 26376875 -59061605 + HsTC2 DNA Tc2 1778 1889 -9 227 227 61 30 chr17 26377325 26377391 -59061089 - Alu SINE Alu -123 177 134 2109 128 0 3 chr17 26377897 26378202 -59060278 - AluSq SINE Alu -9 304 1 21 0 0 0 chr17 26378413 26378434 -59060046 + AT_rich Low_complexity Low_complexity 1 21 0 2216 97 3 3 chr17 26378510 26378800 -59059680 - AluSx SINE Alu -22 290 1 1836 162 0 46 chr17 26378956 26379283 -59059197 - AluJo SINE Alu 0 312 1 1825 206 65 118 chr17 26379290 26379775 -59058705 - L1ME2 LINE L1 0 6164 5724 1616 160 41 8 chr17 26379775 26380043 -59058437 + AluJo SINE Alu 1 277 -35 1825 206 65 118 chr17 26380043 26380235 -59058245 - L1ME2 LINE L1 -440 5724 5523 2035 106 64 0 chr17 26380334 26380617 -59057863 - AluSg SINE Alu -9 301 1 233 246 33 0 chr17 26380784 26380845 -59057635 - MIR SINE MIR -94 168 106 596 237 90 20 chr17 26380861 26381106 -59057374 - L1MDa LINE L1 -3913 2627 2366 1489 262 70 10 chr17 26381200 26381721 -59056759 - L1ME3 LINE L1 -304 5858 5367 180 225 225 0 chr17 26381997 26382037 -59056443 - MIR SINE MIR -162 100 52 240 189 0 0 chr17 26382778 26382852 -59055628 + (TTAA)n Simple_repeat Simple_repeat 3 76 0 2351 107 3 0 chr17 26383015 26383325 -59055155 - AluSx SINE Alu -1 311 1 347 333 88 78 chr17 26383557 26383957 -59054523 + L2 LINE L2 2867 3270 -2 890 160 8 0 chr17 26384197 26384322 -59054158 - FLAM_C SINE Alu -7 126 1 232 25 75 0 chr17 26384341 26384381 -59054099 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 230 341 124 8 chr17 26384381 26384510 -59053970 - L2 LINE L2 -26 3287 3144 850 174 8 0 chr17 26384661 26384793 -59053687 + FLAM_C SINE Alu 1 133 0 1570 225 132 76 chr17 26385311 26385826 -59052654 - MLT1H1 LTR MaLR 0 555 12 1516 187 3 71 chr17 26386828 26387154 -59051326 - AluJo SINE Alu -8 304 1 2216 81 3 3 chr17 26387298 26387615 -59050865 - AluY SINE Alu 0 317 1 231 222 95 16 chr17 26387660 26387723 -59050757 - MER63 DNA MER1_type -3 1058 991 218 315 27 14 chr17 26387833 26387906 -59050574 - MER5B DNA MER1_type -104 74 1 224 289 340 0 chr17 26388040 26388137 -59050343 + L2 LINE L2 3143 3272 0 208 340 32 21 chr17 26388121 26388215 -59050265 - MIR SINE MIR -148 114 20 * 283 298 46 40 chr17 26388373 26388524 -59049956 - MIR SINE MIR -55 207 56 216 0 0 0 chr17 26389994 26390018 -59048462 + (T)n Simple_repeat Simple_repeat 1 24 0 2486 76 0 0 chr17 26390287 26390591 -59047889 - AluSq SINE Alu -9 304 1 1959 141 0 0 chr17 26391304 26391581 -59046899 + AluSx SINE Alu 18 294 -18 362 286 80 132 chr17 26391766 26391888 -59046592 + L2 LINE L2 2890 3017 -255 1533 179 18 25 chr17 26391888 26392168 -59046312 - AluJo SINE Alu -29 283 6 362 286 80 132 chr17 26392168 26392394 -59046086 + L2 LINE L2 3017 3220 -52 903 87 201 0 chr17 26393162 26393311 -59045169 - MER30 DNA MER1_type 0 230 52 2124 141 0 0 chr17 26393311 26393615 -59044865 - AluSx SINE Alu -8 304 1 34 24 0 0 chr17 26393740 26393781 -59044699 + AT_rich Low_complexity Low_complexity 1 41 0 1708 178 18 0 chr17 26393891 26394172 -59044308 - AluJo SINE Alu -14 298 13 30 45 0 0 chr17 26394264 26394308 -59044172 + AT_rich Low_complexity Low_complexity 1 44 0 186 333 53 0 chr17 26394400 26394475 -59044005 + L2 LINE L2 3142 3220 -52 547 116 32 0 chr17 26394493 26394588 -59043892 - L1MB8 LINE L1 0 6178 6081 1673 206 0 3 chr17 26394612 26394904 -59043576 - AluJb SINE Alu -21 291 1 2303 67 3 0 chr17 26394929 26395234 -59043246 + AluY SINE Alu 1 306 0 318 241 94 33 chr17 26395254 26395421 -59043059 + L1 LINE L1 5150 5338 -824 2079 95 25 7 chr17 26395421 26395704 -59042776 + AluSx SINE Alu 1 288 -24 318 241 94 33 chr17 26395704 26395770 -59042710 + L1 LINE L1 5338 5399 -763 21 36 0 0 chr17 26395773 26395801 -59042679 + AT_rich Low_complexity Low_complexity 1 28 0 2490 58 0 0 chr17 26395856 26396149 -59042331 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr17 26396149 26396170 -59042310 + AT_rich Low_complexity Low_complexity 1 21 0 2402 66 7 7 chr17 26396170 26396474 -59042006 + AluY SINE Alu 1 304 -7 2537 62 7 0 chr17 26396474 26396781 -59041699 + AluY SINE Alu 1 309 -2 249 278 61 40 chr17 26396920 26397118 -59041362 + L1ME4a LINE L1 5690 5891 -230 247 158 0 53 chr17 26397165 26397222 -59041258 + L1ME4a LINE L1 6063 6116 -5 2135 124 0 19 chr17 26397261 26397435 -59041045 - AluSq SINE Alu -5 308 141 2299 104 3 0 chr17 26397435 26397742 -59040738 - AluSc SINE Alu -1 308 1 2135 124 0 19 chr17 26397742 26397881 -59040599 - AluSq SINE Alu -172 141 1 2092 129 0 26 chr17 26398158 26398469 -59040011 - AluSx SINE Alu -9 303 1 1188 156 103 73 chr17 26399610 26399742 -59038738 + MER2 DNA MER2_type 2 129 -216 1574 191 38 3 chr17 26399742 26399910 -59038570 - AluJo SINE Alu -11 301 117 195 42 0 0 chr17 26399910 26399934 -59038546 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1574 191 38 3 chr17 26399934 26400053 -59038427 - AluJo SINE Alu -195 117 4 1188 156 103 73 chr17 26400053 26400221 -59038259 + MER2 DNA MER2_type 129 311 -34 2332 98 0 7 chr17 26400229 26400534 -59037946 - AluY SINE Alu -8 303 1 456 123 284 0 chr17 26400819 26400900 -59037580 + FLAM_C SINE Alu 28 131 -12 1970 82 4 0 chr17 26400931 26401176 -59037304 + AluSp SINE Alu 1 246 -67 24 67 0 0 chr17 26401936 26401981 -59036499 + AT_rich Low_complexity Low_complexity 1 45 0 294 279 271 8 chr17 26402374 26402496 -59035984 - L2 LINE L2 -1 3312 3159 225 94 0 0 chr17 26403232 26403264 -59035216 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 895 128 60 0 chr17 26403269 26403402 -59035078 - FRAM SINE Alu -36 140 1 2155 84 3 7 chr17 26403634 26403919 -59034561 - AluSc SINE Alu -15 294 11 1978 158 0 0 chr17 26404349 26404647 -59033833 - AluJo SINE Alu -14 298 1 227 246 66 0 chr17 26405304 26405365 -59033115 - L1MC4 LINE L1 -13 8029 7965 2241 116 7 3 chr17 26405583 26405886 -59032594 + AluSx SINE Alu 1 304 -8 209 194 0 0 chr17 26406021 26406057 -59032423 - L2 LINE L2 -23 3290 3255 1213 231 126 58 chr17 26406162 26406712 -59031768 - MLT1L LTR MaLR -28 587 1 261 260 117 0 chr17 26406767 26406844 -59031636 + MLT1K LTR MaLR 3 88 -500 836 283 81 29 chr17 26406856 26407164 -59031316 + MLT1K LTR MaLR 265 588 0 21 0 0 0 chr17 26407956 26407977 -59030503 + AT_rich Low_complexity Low_complexity 1 21 0 758 262 191 25 chr17 26408078 26408395 -59030085 - MLT1I LTR MaLR -1 449 28 579 253 111 97 chr17 26408541 26408912 -59029568 - MLT1K LTR MaLR -144 444 69 232 289 105 0 chr17 26409296 26409372 -59029108 - MIR SINE MIR -142 120 37 265 281 146 0 chr17 26409410 26409492 -59028988 + L2 LINE L2 3189 3282 -31 578 253 24 41 chr17 26411148 26411318 -59027162 - MIR SINE MIR -14 248 82 192 40 0 0 chr17 26411450 26411475 -59027005 + (TG)n Simple_repeat Simple_repeat 2 26 0 333 260 13 0 chr17 26411622 26411699 -59026781 - L2 LINE L2 0 3272 3195 618 334 73 69 chr17 26411709 26411823 -59026657 + L2 LINE L2 2665 2777 -536 2457 80 0 0 chr17 26411823 26412124 -59026356 - AluY SINE Alu -10 301 1 618 334 73 69 chr17 26412124 26412663 -59025817 + L2 LINE L2 2777 3313 0 2017 123 23 26 chr17 26413555 26413864 -59024616 - AluSq SINE Alu -5 308 1 1576 170 49 4 chr17 26414139 26414404 -59024076 - AluJo SINE Alu -22 290 14 3997 181 19 13 chr17 26414458 26414640 -59023840 - L1 LINE L1 -3196 4369 4190 2089 122 19 19 chr17 26414640 26414952 -59023528 - AluSx SINE Alu 0 312 1 3997 181 19 13 chr17 26414952 26415667 -59022813 - L1 LINE L1 -3375 4190 3463 1118 116 0 16 chr17 26415667 26415917 -59022563 + (TCCC)n Simple_repeat Simple_repeat 1 423 0 1019 162 5 5 chr17 26415917 26416108 -59022372 - L1 LINE L1 -4068 3497 3307 279 226 9 52 chr17 26416120 26416235 -59022245 + L1MA3 LINE L1 5297 5406 -2402 979 108 0 0 chr17 26416309 26416448 -59022032 + L1MA3 LINE L1 6167 6305 0 520 277 119 10 chr17 26416470 26416773 -59021707 - L1M4 LINE L1 -873 5273 4938 1257 81 121 6 chr17 26417787 26417961 -59020519 + AluY SINE Alu 105 298 -13 36 0 0 0 chr17 26417995 26418031 -59020449 + AT_rich Low_complexity Low_complexity 1 36 0 222 294 247 0 chr17 26418139 26418224 -59020256 + MIR SINE MIR 2 107 -155 609 222 175 36 chr17 26418226 26418478 -59020002 + L2 LINE L2 3025 3311 -2 2344 100 0 16 chr17 26418959 26419270 -59019210 + AluSx SINE Alu 1 306 -6 7775 178 84 35 chr17 26419765 26421413 -59017067 + MER52A LTR ERV1 27 1755 0 357 305 63 58 chr17 26421566 26421740 -59016740 + MER5B DNA MER1_type 3 177 -1 301 280 93 17 chr17 26421886 26422004 -59016476 + MIR SINE MIR 117 243 -19 790 224 137 15 chr17 26422749 26422954 -59015526 - MIR SINE MIR -31 231 2 474 142 19 246 chr17 26423034 26423302 -59015178 + L1ME3A LINE L1 5963 6169 -1 1811 166 3 25 chr17 26423704 26424018 -59014462 - AluJo SINE Alu -5 307 1 616 202 67 67 chr17 26424023 26424156 -59014324 - MER5B DNA MER1_type 0 178 43 2251 110 0 0 chr17 26424156 26424456 -59014024 + AluSx SINE Alu 1 300 -12 616 202 67 67 chr17 26424456 26424500 -59013980 - MER5B DNA MER1_type -134 44 1 2032 118 0 68 chr17 26425237 26425559 -59012921 + AluSx SINE Alu 1 300 -12 209 158 193 0 chr17 26427014 26427071 -59011409 + L2 LINE L2 3246 3313 0 1515 165 158 0 chr17 26427584 26427844 -59010636 - AluJo SINE Alu -1 301 1 2161 116 17 0 chr17 26428025 26428318 -59010162 - AluSx SINE Alu -14 298 1 1328 191 105 50 chr17 26429693 26430121 -59008359 + MER66A LTR ERV1 102 478 0 2518 63 0 0 chr17 26431182 26431485 -59006995 + AluY SINE Alu 1 303 -8 2133 113 0 23 chr17 26431701 26431841 -59006639 + AluSx SINE Alu 1 143 -169 225 0 0 0 chr17 26431841 26431866 -59006614 + (TA)n Simple_repeat Simple_repeat 1 25 0 2133 113 0 23 chr17 26431866 26432035 -59006445 + AluSx SINE Alu 143 303 -9 2486 69 0 0 chr17 26432690 26432993 -59005487 + AluY SINE Alu 3 305 -6 22 0 0 0 chr17 26433089 26433111 -59005369 + AT_rich Low_complexity Low_complexity 1 22 0 2111 98 21 7 chr17 26433299 26433611 -59004869 + AluSq SINE Alu 1 316 0 1163 200 0 37 chr17 26433623 26433868 -59004612 + AluJo SINE Alu 63 298 -14 2075 118 24 0 chr17 26433984 26434273 -59004207 + AluSx SINE Alu 1 296 -16 2286 88 3 0 chr17 26434539 26434834 -59003646 - AluY SINE Alu -15 296 1 272 228 65 33 chr17 26434954 26435046 -59003434 + L1M4 LINE L1 3885 3979 -2167 2173 91 13 10 chr17 26435071 26435369 -59003111 - AluSc SINE Alu -10 299 1 711 253 6 18 chr17 26435626 26435796 -59002684 + MIR SINE MIR 48 215 -47 597 200 22 67 chr17 26435804 26435939 -59002541 + FLAM_A SINE Alu 1 129 -4 23 54 0 0 chr17 26436001 26436038 -59002442 + AT_rich Low_complexity Low_complexity 1 37 0 194 263 88 0 chr17 26436205 26436262 -59002218 - L2 LINE L2 -2 3311 3250 2319 68 4 0 chr17 26436650 26436930 -59001550 + AluSx SINE Alu 1 281 -31 198 0 0 0 chr17 26436933 26436955 -59001525 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 222 299 0 15 chr17 26437067 26437134 -59001346 + T-rich Low_complexity Low_complexity 4 69 0 1883 155 0 10 chr17 26437204 26437507 -59000973 + AluJb SINE Alu 1 300 -12 1097 159 0 0 chr17 26438408 26438571 -58999909 + AluJb SINE Alu 136 298 -14 553 70 233 0 chr17 26438912 26438998 -58999482 - THE1B LTR MaLR -258 106 1 788 21 0 0 chr17 26438998 26439095 -58999385 - THE1B-int LTR MaLR 0 1580 1484 2404 99 56 31 chr17 26439113 26439468 -58999012 - THE1B LTR MaLR 0 364 1 1489 183 62 7 chr17 26439482 26439756 -58998724 - AluJb SINE Alu -23 289 1 1804 175 87 4 chr17 26439756 26440143 -58998337 - L1MB2 LINE L1 -40 6131 5711 305 298 32 0 chr17 26440118 26440212 -58998268 - L1MC/D LINE L1 -1985 5823 5727 * 643 174 159 0 chr17 26440220 26440358 -58998122 - MLT1D LTR MaLR -8 497 338 1866 132 9 150 chr17 26440359 26440576 -58997904 + MLT1B LTR MaLR 1 126 -264 1767 167 36 13 chr17 26440576 26440881 -58997599 + AluJo SINE Alu 1 312 0 1866 132 9 150 chr17 26440881 26441104 -58997376 + MLT1B LTR MaLR 126 379 -11 872 233 27 99 chr17 26441112 26441278 -58997202 - MLT1D LTR MaLR -165 340 164 6343 94 2 66 chr17 26441278 26441822 -58996658 - L1PA13 LINE L1 -4 6159 5582 2289 107 0 3 chr17 26441822 26442122 -58996358 - AluSq SINE Alu -9 304 6 6343 94 2 66 chr17 26442122 26442418 -58996062 - L1PA13 LINE L1 -581 5582 5269 1998 143 31 0 chr17 26442418 26442711 -58995769 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 26442711 26442723 -58995757 - L1PA13 LINE L1 -894 5269 5258 2236 120 3 0 chr17 26442723 26443024 -58995456 - AluSx SINE Alu -10 302 1 6343 94 2 66 chr17 26443024 26443339 -58995141 - L1PA13 LINE L1 -905 5258 5019 872 233 27 99 chr17 26443339 26443537 -58994943 - MLT1D LTR MaLR -341 164 2 1955 119 45 0 chr17 26443544 26443830 -58994650 - AluSg SINE Alu -11 299 1 190 306 0 0 chr17 26444319 26444368 -58994112 + L2 LINE L2 3263 3311 -2 969 154 51 133 chr17 26444949 26445183 -58993297 + MER58C DNA MER1_type 1 215 0 618 322 87 17 chr17 26445394 26445683 -58992797 + MLT1L LTR MaLR 215 523 -92 2203 100 3 3 chr17 26446005 26446350 -58992130 + AluSq SINE Alu 1 313 0 951 181 68 0 chr17 26446776 26446953 -58991527 + MER5A DNA MER1_type 1 189 0 2277 112 0 6 chr17 26447801 26448114 -58990366 + AluSx SINE Alu 1 311 -1 1634 170 16 29 chr17 26448807 26449119 -58989361 - AluJb SINE Alu -4 308 1 2128 117 3 3 chr17 26450438 26450737 -58987743 + AluSx SINE Alu 1 299 -13 739 243 231 42 chr17 26452017 26452515 -58985965 + L1MC4a LINE L1 5583 6174 -1634 472 265 108 20 chr17 26453572 26453821 -58984659 + L1ME LINE L1 5347 5617 -504 855 169 0 7 chr17 26454457 26454599 -58983881 + FLAM_C SINE Alu 3 143 0 2102 122 3 0 chr17 26454697 26454991 -58983489 + AluSx SINE Alu 1 295 -17 2144 116 3 0 chr17 26455260 26455554 -58982926 + AluSx SINE Alu 1 295 -17 1949 150 7 0 chr17 26455993 26456280 -58982200 + AluJb SINE Alu 1 289 -23 31 20 0 20 chr17 26456337 26456355 -58982125 + AT_rich Low_complexity Low_complexity 1 18 -30 2311 118 40 40 chr17 26456355 26456729 -58981751 + THE1C LTR MaLR 1 374 -1 31 20 0 20 chr17 26456729 26456759 -58981721 + AT_rich Low_complexity Low_complexity 18 48 0 352 222 56 9 chr17 26456875 26456983 -58981497 + L2 LINE L2 2132 2244 -1070 283 204 0 19 chr17 26457028 26457082 -58981398 - Tigger5 DNA MER2_type -2270 53 1 1271 298 100 39 chr17 26457089 26457842 -58980638 + L2 LINE L2 2259 3054 -218 2255 96 14 0 chr17 26657975 26658266 -58780214 - AluSq SINE Alu -18 295 1 2360 86 0 0 chr17 26658318 26658620 -58779860 - AluSc SINE Alu -7 302 1 1943 127 10 7 chr17 26658799 26659090 -58779390 - AluSx SINE Alu -20 292 1 1078 155 150 0 chr17 26659254 26659441 -58779039 - Tigger3(Golem) DNA MER2_type -16 3013 2799 994 243 47 25 chr17 26660184 26660419 -58778061 + MIR SINE MIR 23 262 0 1176 132 0 16 chr17 26661450 26661632 -58776848 - AluSg/x SINE Alu 0 312 134 1939 148 7 0 chr17 26661632 26661929 -58776551 - AluSx SINE Alu -13 299 1 839 211 41 12 chr17 26662196 26662367 -58776113 + FRAM SINE Alu 1 40 0 725 192 16 0 chr17 26662388 26662513 -58775967 - FLAM_A SINE Alu -8 134 8 1772 121 4 37 chr17 26662682 26662820 -58775660 + AluSx SINE Alu 6 132 -180 2351 78 0 19 chr17 26662820 26663127 -58775353 + AluSp SINE Alu 1 301 -12 1772 121 4 37 chr17 26663127 26663260 -58775220 + AluSx SINE Alu 132 268 -44 1263 134 24 38 chr17 26663735 26663944 -58774536 + AluJo SINE Alu 1 206 -106 26 30 0 0 chr17 26664342 26664375 -58774105 + AT_rich Low_complexity Low_complexity 1 33 0 1746 137 4 4 chr17 26664810 26665072 -58773408 - AluSq SINE Alu -18 295 34 1018 86 0 29 chr17 26665323 26665463 -58773017 + FRAM SINE Alu 29 164 -12 251 186 35 47 chr17 26665508 26665594 -58772886 + MIR SINE MIR 47 131 -77 282 318 32 37 chr17 26665851 26666040 -58772440 + L2 LINE L2 2399 2586 -728 1989 105 79 0 chr17 26666124 26666401 -58772079 - AluSx SINE Alu -13 299 1 1376 191 14 83 chr17 26666401 26666588 -58771892 - L1MB7 LINE L1 -123 6061 5908 1728 154 0 32 chr17 26666588 26666873 -58771607 - AluJb SINE Alu -36 276 1 1376 191 14 83 chr17 26666873 26667036 -58771444 - L1MB7 LINE L1 -276 5908 5735 1286 139 21 106 chr17 26667057 26667290 -58771190 - L1MA9 LINE L1 0 6312 6061 1880 149 14 0 chr17 26667290 26667572 -58770908 - AluSx SINE Alu -26 286 1 1286 139 21 106 chr17 26667572 26667620 -58770860 - L1MA9 LINE L1 -251 6061 6060 1745 154 14 10 chr17 26667620 26667912 -58770568 - AluJo SINE Alu -17 295 3 1286 139 21 106 chr17 26667912 26667960 -58770520 - L1MA9 LINE L1 -252 6060 6010 264 157 98 0 chr17 26668060 26668111 -58770369 + AluYb8 SINE Alu 209 264 -44 208 214 18 0 chr17 26668589 26668645 -58769835 + MER5C DNA MER1_type 261 317 -7 1920 131 27 0 chr17 26668696 26668993 -58769487 - AluSx SINE Alu -7 305 1 1859 144 7 10 chr17 26669034 26669326 -58769154 - AluSx SINE Alu -19 293 3 1929 123 7 7 chr17 26669380 26669656 -58768824 + AluSx SINE Alu 1 276 -36 194 0 39 0 chr17 26669658 26669684 -58768796 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2411 78 0 0 chr17 26669749 26670042 -58768438 + AluSg SINE Alu 1 293 -17 2073 119 3 29 chr17 26671224 26671397 -58767083 - AluSx SINE Alu -9 303 127 207 0 0 0 chr17 26671397 26671420 -58767060 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2257 100 0 0 chr17 26671420 26671701 -58766779 - AluSc SINE Alu -28 281 1 2073 119 3 29 chr17 26671701 26671837 -58766643 - AluSx SINE Alu -183 129 1 1489 186 31 41 chr17 26671929 26672062 -58766418 + AluJb SINE Alu 1 134 -168 2279 73 3 10 chr17 26672062 26672362 -58766118 + AluY SINE Alu 1 298 -13 1489 186 31 41 chr17 26672362 26672380 -58766100 + AluJb SINE Alu 134 151 -151 2015 138 3 35 chr17 26672380 26672514 -58765966 + AluSx SINE Alu 1 138 -174 2131 115 0 7 chr17 26672514 26672810 -58765670 + AluSq SINE Alu 1 294 -19 2015 138 3 35 chr17 26672810 26672994 -58765486 + AluSx SINE Alu 138 309 -3 1489 186 31 41 chr17 26672994 26673131 -58765349 + AluJb SINE Alu 151 287 -15 1705 158 42 0 chr17 26673151 26673435 -58765045 + AluSx SINE Alu 1 296 -16 258 192 0 0 chr17 26673435 26673487 -58764993 + (TA)n Simple_repeat Simple_repeat 1 52 0 1728 109 83 4 chr17 26673733 26673998 -58764482 + AluSc SINE Alu 1 286 -23 1343 67 0 6 chr17 26674008 26674172 -58764308 + AluY SINE Alu 1 163 -148 1450 212 3 43 chr17 26674275 26674401 -58764079 + AluJo SINE Alu 2 131 -171 2019 118 3 3 chr17 26674401 26674688 -58763792 - AluSg SINE Alu -23 287 1 1450 212 3 43 chr17 26674688 26674863 -58763617 + AluJo SINE Alu 131 291 -11 22 0 0 0 chr17 26674864 26674886 -58763594 + AT_rich Low_complexity Low_complexity 1 22 0 931 215 0 6 chr17 26674889 26675052 -58763428 + FRAM SINE Alu 4 165 -1 535 204 0 19 chr17 26675067 26675170 -58763310 + FRAM SINE Alu 66 166 -10 391 245 119 116 chr17 26675184 26675645 -58762835 + L2 LINE L2 2772 3276 -37 2132 106 0 14 chr17 26675787 26676103 -58762377 + AluSg SINE Alu 1 310 0 2127 96 0 4 chr17 26676140 26676459 -58762021 + AluSc SINE Alu 1 318 0 1629 208 0 0 chr17 26676465 26676759 -58761721 + AluJo SINE Alu 1 294 -18 2013 127 3 20 chr17 26676762 26677061 -58761419 + AluSx SINE Alu 1 294 -18 2100 138 0 0 chr17 26677310 26677614 -58760866 + AluSx SINE Alu 1 304 -8 1649 168 31 11 chr17 26677802 26678088 -58760392 + AluJo SINE Alu 1 292 -20 2174 133 0 0 chr17 26678088 26678389 -58760091 + AluSx SINE Alu 1 301 -11 2384 65 20 0 chr17 26678389 26678682 -58759798 + AluY SINE Alu 1 299 -12 2538 59 0 3 chr17 26679084 26679389 -58759091 + AluY SINE Alu 2 305 -6 554 242 152 17 chr17 26679600 26679778 -58758702 + L2 LINE L2 3112 3313 0 206 221 42 147 chr17 26680470 26680565 -58757915 + L2 LINE L2 3133 3217 -55 25 75 0 0 chr17 26681131 26681184 -58757296 + AT_rich Low_complexity Low_complexity 1 53 0 1889 84 28 4 chr17 26682092 26682341 -58756139 - AluY SINE Alu -55 256 2 1659 158 65 0 chr17 26682371 26682649 -58755831 - AluJb SINE Alu -16 296 1 28 0 0 0 chr17 26683464 26683492 -58754988 + AT_rich Low_complexity Low_complexity 1 28 0 735 209 0 59 chr17 26683688 26683841 -58754639 - FRAM SINE Alu -16 160 17 1223 195 54 64 chr17 26684039 26684337 -58754143 - AluJo SINE Alu -17 295 1 1418 203 51 4 chr17 26684349 26684625 -58753855 - AluJo SINE Alu -23 289 1 2331 88 13 3 chr17 26684638 26684944 -58753536 - AluSc SINE Alu 0 309 1 2127 134 0 0 chr17 26685101 26685392 -58753088 - AluSg SINE Alu -19 291 1 25 0 0 0 chr17 26685478 26685503 -58752977 + AT_rich Low_complexity Low_complexity 1 25 0 1850 104 48 4 chr17 26685659 26685927 -58752553 + AluSg SINE Alu 1 280 -30 2031 218 128 93 chr17 26687198 26687976 -58750504 - L1MC4 LINE L1 -97 7945 7196 198 103 0 0 chr17 26687976 26688005 -58750475 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 261 0 0 0 chr17 26688004 26688033 -58750447 + (GA)n Simple_repeat Simple_repeat 2 30 0 2031 218 128 93 chr17 26688005 26688039 -58750441 - L1MC4 LINE L1 -846 7196 7165 793 197 16 0 chr17 26688039 26688166 -58750314 + AluJo SINE Alu 4 132 -170 2031 218 128 93 chr17 26688166 26688422 -58750058 - L1MC4 LINE L1 -877 7165 6858 2376 91 3 0 chr17 26688422 26688730 -58749750 - AluSp SINE Alu -4 309 1 2031 218 128 93 chr17 26688730 26688832 -58749648 - L1MC4 LINE L1 -1184 6858 6761 945 175 45 7 chr17 26688861 26689015 -58749465 + AluJo SINE Alu 137 296 -6 611 269 130 0 chr17 26689233 26689441 -58749039 + L1MC/D LINE L1 5309 5543 -2265 833 238 88 9 chr17 26689682 26689909 -58748571 + MIR SINE MIR 18 262 0 220 118 29 0 chr17 26690123 26690157 -58748323 - L2 LINE L2 -15 3298 3264 2094 120 3 10 chr17 26690334 26690635 -58747845 + AluSg SINE Alu 1 299 -11 2227 104 0 3 chr17 26691226 26691525 -58746955 - AluSg SINE Alu -12 298 1 715 179 232 21 chr17 26691541 26691731 -58746749 + MIR SINE MIR 30 259 -3 304 302 119 45 chr17 26692533 26692786 -58745694 + L1ME4a LINE L1 5285 5582 -539 1823 157 3 13 chr17 26692786 26693086 -58745394 + AluSx SINE Alu 1 297 -15 304 302 119 45 chr17 26693086 26693265 -58745215 + L1ME4a LINE L1 5582 5746 -375 189 0 0 0 chr17 26693331 26693352 -58745128 + (TA)n Simple_repeat Simple_repeat 2 22 0 249 253 38 13 chr17 26693363 26693442 -58745038 + L1ME4a LINE L1 5989 6069 -52 206 118 0 0 chr17 26693532 26693566 -58744914 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2382 98 0 0 chr17 26693568 26693874 -58744606 - AluSg SINE Alu -4 306 1 2241 84 3 3 chr17 26694262 26694549 -58743931 - AluY SINE Alu -24 287 1 1159 161 43 39 chr17 26694588 26694818 -58743662 - AluJo SINE Alu -81 231 1 555 227 23 16 chr17 26694822 26694950 -58743530 + MER77 LTR ERV1 477 605 0 645 213 0 57 chr17 26695284 26695425 -58743055 - FLAM_A SINE Alu 0 133 1 2224 126 0 0 chr17 26695429 26695738 -58742742 - AluSx SINE Alu -3 309 1 2259 117 0 13 chr17 26695892 26696208 -58742272 - AluSq SINE Alu -1 312 1 2038 148 0 0 chr17 26696278 26696568 -58741912 + AluSx SINE Alu 1 290 -22 803 145 0 30 chr17 26696840 26696971 -58741509 + FLAM_C SINE Alu 1 127 -16 2246 107 0 0 chr17 26697802 26698093 -58740387 + AluSq SINE Alu 9 299 -14 2061 114 31 7 chr17 26699218 26699507 -58738973 - AluSc SINE Alu -13 296 1 2215 80 52 3 chr17 26699545 26699834 -58738646 - AluSg SINE Alu -7 303 1 1417 179 46 36 chr17 26700003 26700305 -58738175 + AluJo SINE Alu 8 312 0 698 228 27 124 chr17 26700637 26700739 -58737741 - MIR SINE MIR 0 262 152 2252 105 0 0 chr17 26700739 26701033 -58737447 - AluSg1 SINE Alu -15 294 1 698 228 27 124 chr17 26701033 26701189 -58737291 - MIR SINE MIR -110 152 29 2324 83 3 0 chr17 26701207 26701496 -58736984 - AluSq SINE Alu -23 290 1 965 83 8 8 chr17 26701499 26701631 -58736849 - AluSq/x SINE Alu -181 132 1 790 97 9 18 chr17 26702215 26702328 -58736152 + AluSq/x SINE Alu 2 113 -199 2286 94 0 7 chr17 26702892 26703201 -58735279 - AluSc SINE Alu -2 307 1 2197 116 0 13 chr17 26703206 26703371 -58735109 - AluSx SINE Alu -14 298 137 1868 133 42 7 chr17 26703371 26703656 -58734824 - AluSc SINE Alu -14 295 1 2197 116 0 13 chr17 26703656 26703792 -58734688 - AluSx SINE Alu -175 137 1 2442 68 3 0 chr17 26703807 26704101 -58734379 - AluY SINE Alu -16 295 1 2161 104 3 7 chr17 26704146 26704433 -58734047 - AluSp SINE Alu -27 286 1 252 316 118 31 chr17 26704509 26704688 -58733792 - MIR SINE MIR -50 212 4 1700 119 78 4 chr17 26705160 26705429 -58733051 + AluJo SINE Alu 1 289 -23 1665 177 21 3 chr17 26706129 26706417 -58732063 - AluJb SINE Alu -17 295 3 473 291 55 65 chr17 26706658 26706801 -58731679 + L1ME LINE L1 5309 5452 -718 1792 170 17 3 chr17 26706801 26707101 -58731379 + AluJo SINE Alu 1 304 -8 473 291 55 65 chr17 26707101 26707359 -58731121 + L1ME LINE L1 5452 5706 -464 2288 91 3 50 chr17 26707484 26707802 -58730678 + AluSp SINE Alu 1 303 -10 616 189 15 61 chr17 26707807 26707939 -58730541 + AluJo/FLAM SINE Alu 2 127 -175 2042 111 3 63 chr17 26707939 26708272 -58730208 + AluSq SINE Alu 1 313 0 1222 102 0 6 chr17 26709011 26709177 -58729303 - AluSg/x SINE Alu -14 298 134 1918 141 37 3 chr17 26709177 26709476 -58729004 - AluSx SINE Alu -3 309 1 1341 159 0 23 chr17 26710061 26710281 -58728199 - AluJo SINE Alu -13 299 85 2227 91 0 24 chr17 26710383 26710680 -58727800 + AluSg SINE Alu 1 290 -20 2061 134 0 0 chr17 26710842 26711149 -58727331 + AluSx SINE Alu 1 307 0 32 35 0 18 chr17 26711247 26711277 -58727203 + AT_rich Low_complexity Low_complexity 1 31 -25 2120 114 0 3 chr17 26711277 26711567 -58726913 + AluSg SINE Alu 1 289 -21 32 35 0 18 chr17 26711567 26711593 -58726887 + AT_rich Low_complexity Low_complexity 31 56 0 1000 178 6 0 chr17 26711651 26711808 -58726672 - FRAM SINE Alu -18 158 1 2108 87 90 0 chr17 26711813 26712090 -58726390 - AluSq SINE Alu -11 302 1 1304 77 71 0 chr17 26712337 26712519 -58725961 + AluY SINE Alu 105 299 -12 746 140 7 60 chr17 26712673 26712823 -58725657 + FLAM_C SINE Alu 2 143 0 189 239 30 45 chr17 26713333 26713400 -58725080 + MIR SINE MIR 122 187 -75 1225 171 9 28 chr17 26713640 26713857 -58724623 + MER20 DNA MER1_type 7 219 0 1072 181 267 7 chr17 26713917 26714205 -58724275 + MLT1A1 LTR MaLR 1 363 -2 607 244 0 0 chr17 26714685 26714804 -58723676 + FLAM_A SINE Alu 5 123 -10 2153 115 0 20 chr17 26714939 26715223 -58723257 + AluSx SINE Alu 2 281 -31 186 71 0 0 chr17 26715223 26715251 -58723229 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 2153 115 0 20 chr17 26715251 26715271 -58723209 + AluSx SINE Alu 281 300 -12 2324 100 3 0 chr17 26715328 26715629 -58722851 + AluSx SINE Alu 1 302 -10 2358 100 0 3 chr17 26717824 26718123 -58720357 + AluSx SINE Alu 1 298 -14 286 278 22 33 chr17 26718193 26718283 -58720197 + MIR SINE MIR 25 113 -149 2147 96 3 7 chr17 26720998 26721313 -58717167 - AluSx SINE Alu 0 312 2 2139 119 17 0 chr17 26721320 26721622 -58716858 - AluSx SINE Alu -5 307 1 2144 98 9 58 chr17 26721645 26721971 -58716509 - AluSg SINE Alu 0 310 1 1345 147 18 5 chr17 26722092 26722316 -58716164 - AluJo SINE Alu 0 312 86 1841 127 14 4 chr17 26722327 26722603 -58715877 - AluJb SINE Alu -23 289 11 465 274 45 21 chr17 26722605 26722773 -58715707 - L1ME LINE L1 -386 5768 5601 2057 114 26 19 chr17 26723013 26723321 -58715159 + AluSx SINE Alu 3 312 0 764 156 8 0 chr17 26723333 26723461 -58715019 + FLAM_C SINE Alu 5 133 -10 2177 122 3 0 chr17 26723472 26723775 -58714705 + AluSx SINE Alu 1 304 -8 1778 131 7 43 chr17 26723779 26723913 -58714567 + AluSx SINE Alu 1 121 -191 2161 127 0 3 chr17 26723913 26724220 -58714260 + AluSg SINE Alu 1 306 -4 1778 131 7 43 chr17 26724220 26724367 -58714113 + AluSx SINE Alu 121 272 -40 328 318 32 32 chr17 26724677 26724897 -58713583 + L2 LINE L2 2073 2292 -1022 1227 141 117 82 chr17 26725150 26725292 -58713188 - AluJo SINE Alu -11 301 165 2412 87 0 0 chr17 26725292 26725591 -58712889 - AluY SINE Alu -11 300 2 1227 141 117 82 chr17 26725591 26725739 -58712741 - AluJo SINE Alu -147 165 1 909 114 0 0 chr17 26725820 26725943 -58712537 - FLAM_C SINE Alu -8 125 3 2073 131 0 0 chr17 26725953 26726236 -58712244 - AluSx SINE Alu -16 296 14 195 366 30 23 chr17 26726246 26726377 -58712103 + L2 LINE L2 2615 2746 -568 192 303 161 64 chr17 26726412 26726630 -58711850 + L2 LINE L2 2942 3180 -92 2368 80 3 3 chr17 26726638 26726938 -58711542 - AluSc SINE Alu -9 300 1 1859 153 28 0 chr17 26726954 26727241 -58711239 - AluJb SINE Alu -17 295 1 1921 133 7 11 chr17 26727409 26727694 -58710786 + AluJb SINE Alu 9 292 -20 852 101 0 8 chr17 26727706 26727825 -58710655 + L1MA2 LINE L1 6150 6267 -37 2054 136 47 36 chr17 26728030 26728390 -58710090 + THE1B LTR MaLR 1 364 0 2686 146 65 0 chr17 26728759 26729238 -58709242 - L1MA9 LINE L1 -44 6268 5759 422 274 14 85 chr17 26729311 26729419 -58709061 + MIR SINE MIR 55 140 -122 2163 121 3 0 chr17 26729419 26729716 -58708764 + AluSx SINE Alu 1 298 -14 422 274 14 85 chr17 26729716 26729830 -58708650 + MIR SINE MIR 140 261 -1 2234 110 3 7 chr17 26729951 26730250 -58708230 + AluSg SINE Alu 1 298 -12 2036 164 0 0 chr17 26730259 26730557 -58707923 + AluJb SINE Alu 1 298 -14 201 39 0 0 chr17 26730565 26730591 -58707889 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 225 362 17 0 chr17 26730873 26730989 -58707491 - MER5A DNA MER1_type 0 189 72 1576 164 85 14 chr17 26731172 26731453 -58707027 - AluJo SINE Alu -11 301 1 512 165 104 17 chr17 26731484 26731599 -58706881 + FLAM_C SINE Alu 1 125 -8 1954 152 36 0 chr17 26732038 26732340 -58706140 - AluSq SINE Alu 0 313 1 302 153 17 0 chr17 26732695 26732754 -58705726 + MER5A DNA MER1_type 47 106 -83 2488 91 0 0 chr17 26732796 26733105 -58705375 - AluSq SINE Alu -4 309 1 2246 70 21 7 chr17 26733124 26733410 -58705070 - AluSg SINE Alu -20 290 1 1982 158 0 0 chr17 26734177 26734468 -58704012 - AluJo SINE Alu -21 291 1 2100 114 13 29 chr17 26734794 26735109 -58703371 + AluSg SINE Alu 1 310 0 1664 181 33 7 chr17 26735332 26735635 -58702845 + AluJb SINE Alu 1 311 -1 2007 148 3 19 chr17 26735690 26736007 -58702473 + AluSx SINE Alu 1 312 0 2216 121 0 7 chr17 26736039 26736346 -58702134 + AluSg SINE Alu 1 305 -5 2453 81 0 0 chr17 26736346 26736654 -58701826 + AluY SINE Alu 1 308 -3 284 264 239 5 chr17 26736821 26737018 -58701462 - MIR SINE MIR -13 249 7 272 259 94 80 chr17 26737129 26737347 -58701133 + MLT1H LTR MaLR 21 243 -312 207 302 0 0 chr17 26737362 26737415 -58701065 + GA-rich Low_complexity Low_complexity 1 53 0 458 242 83 15 chr17 26737537 26737669 -58700811 + MLT1H LTR MaLR 409 549 0 241 299 197 0 chr17 26737782 26737899 -58700581 - L2 LINE L2 -3 3310 3171 453 282 26 67 chr17 26738070 26738124 -58700356 - MIR SINE MIR -1 261 206 1190 43 25 25 chr17 26738124 26738286 -58700194 - L1PA4 LINE L1 0 6155 5994 453 282 26 67 chr17 26738286 26738426 -58700054 - MIR SINE MIR -56 206 75 2087 136 0 0 chr17 26738492 26738805 -58699675 + AluSx SINE Alu 1 313 0 2246 97 0 10 chr17 26738889 26739188 -58699292 + AluSx SINE Alu 1 296 -16 2254 97 3 7 chr17 26739238 26739536 -58698944 + AluSp SINE Alu 2 298 -15 289 143 0 0 chr17 26739602 26739651 -58698829 - AluSq SINE Alu -1 300 252 2005 107 0 0 chr17 26739751 26740004 -58698476 - AluSq SINE Alu -60 253 1 2040 122 14 10 chr17 26740073 26740367 -58698113 - AluSx SINE Alu -17 295 1 1611 98 0 5 chr17 26740735 26740949 -58697531 - AluSg/x SINE Alu -19 293 81 310 226 88 20 chr17 26741124 26741226 -58697254 + L2 LINE L2 3204 3312 -1 1712 159 3 52 chr17 26741657 26741751 -58696729 + AluJo SINE Alu 1 98 -214 1899 94 8 122 chr17 26741751 26742103 -58696377 + AluSq SINE Alu 1 312 -1 1712 159 3 52 chr17 26742103 26742317 -58696163 + AluJo SINE Alu 98 294 -18 1814 159 40 3 chr17 26742319 26742620 -58695860 + AluJb SINE Alu 1 312 0 2982 132 73 2 chr17 26742631 26743176 -58695304 + L1MB7 LINE L1 5585 6168 -16 707 153 14 62 chr17 26743195 26743339 -58695141 + FLAM_C SINE Alu 7 143 0 22 0 0 0 chr17 26744308 26744330 -58694150 + AT_rich Low_complexity Low_complexity 1 22 0 2274 76 3 10 chr17 26744333 26744623 -58693857 + AluSg SINE Alu 1 288 -22 215 157 20 0 chr17 26744628 26744679 -58693801 + (TA)n Simple_repeat Simple_repeat 1 52 0 194 219 0 0 chr17 26746247 26746288 -58692192 - MIR SINE MIR -114 148 108 1537 100 131 4 chr17 26746294 26746419 -58692061 + AluJb SINE Alu 1 109 -203 333 68 0 0 chr17 26746419 26746463 -58692017 + (CTA)n Simple_repeat Simple_repeat 1 44 0 1537 100 131 4 chr17 26746463 26746597 -58691883 + AluJb SINE Alu 109 293 -19 30 0 0 0 chr17 26746600 26746630 -58691850 + AT_rich Low_complexity Low_complexity 1 30 0 2174 88 14 3 chr17 26746739 26747036 -58691444 + AluSq SINE Alu 1 300 -13 1179 156 37 28 chr17 26747250 26747468 -58691012 + AluJo SINE Alu 1 220 -92 249 179 0 0 chr17 26747468 26747507 -58690973 + Alu SINE Alu 86 124 -178 186 43 0 0 chr17 26747510 26747533 -58690947 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2309 105 0 13 chr17 26748107 26748420 -58690060 + AluSg SINE Alu 1 309 -1 984 352 3 99 chr17 26748490 26748814 -58689666 - AluJb SINE Alu -9 293 1 1489 101 223 8 chr17 26748973 26749235 -58689245 + AluSq SINE Alu 1 313 0 2049 133 17 0 chr17 26749237 26749539 -58688941 + AluSx SINE Alu 1 307 -5 762 152 152 13 chr17 26749540 26749691 -58688789 + AluSq SINE Alu 137 308 -5 419 284 0 17 chr17 26751310 26751426 -58687054 + L3 LINE CR1 1444 1557 -20 213 328 107 33 chr17 26751929 26752051 -58686429 + L2 LINE L2 3137 3267 -5 2154 119 0 3 chr17 26752633 26752954 -58685526 - AluSq SINE Alu 0 320 1 238 280 32 54 chr17 26753940 26754033 -58684447 + MARNA DNA Mariner 414 504 -82 1213 173 27 4 chr17 26754123 26754348 -58684132 - AluJo SINE Alu -11 301 72 369 224 0 0 chr17 26754457 26754524 -58683956 - AluJo SINE Alu -235 67 1 2238 104 3 0 chr17 26754780 26755068 -58683412 + AluSp SINE Alu 1 289 -24 22 0 0 0 chr17 26755068 26755090 -58683390 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr17 26755118 26755140 -58683340 + AT_rich Low_complexity Low_complexity 1 22 0 2338 97 10 0 chr17 26755212 26755510 -58682970 + AluSg SINE Alu 1 301 -9 1595 139 24 98 chr17 26755563 26755973 -58682507 + MER58D DNA MER1_type 1 380 -6 2159 124 3 10 chr17 26756584 26756898 -58681582 + AluSq SINE Alu 1 312 -1 2293 94 7 3 chr17 26757068 26757366 -58681114 + AluSq SINE Alu 1 299 -14 2147 115 0 0 chr17 26757371 26757666 -58680814 + AluY SINE Alu 1 295 -16 2101 128 17 0 chr17 26757666 26757961 -58680519 + AluSq SINE Alu 1 301 -12 1285 154 5 0 chr17 26757769 26757970 -58680510 + AluSq SINE Alu 109 310 -3 858 81 36 0 chr17 26757988 26758103 -58680377 + AluY SINE Alu 177 292 -19 5441 48 39 6 chr17 26758104 26759163 -58679317 + SVA Other Other 5 1386 0 2147 127 10 0 chr17 26759252 26759552 -58678928 - AluSx SINE Alu -9 303 1 2257 76 3 13 chr17 26760462 26760764 -58677716 + AluSp SINE Alu 1 299 -14 811 161 0 0 chr17 26760871 26761001 -58677479 - FLAM_A SINE Alu 0 133 4 211 250 3 28 chr17 26762190 26762262 -58676218 + MIR SINE MIR 97 170 -38 213 235 0 37 chr17 26762867 26762948 -58675532 + (CCG)n Simple_repeat Simple_repeat 1 78 0 213 250 0 0 chr17 26763121 26763181 -58675299 + GA-rich Low_complexity Low_complexity 2 61 0 2314 59 0 10 chr17 26763666 26763969 -58674511 - AluSg SINE Alu -4 306 7 393 210 174 14 chr17 26764212 26764350 -58674130 + L2 LINE L2 2868 3027 -286 212 188 16 78 chr17 26764369 26764433 -58674047 + L2 LINE L2 3192 3251 -62 1703 156 7 4 chr17 26764435 26764710 -58673770 - AluJo SINE Alu -12 300 25 229 188 203 0 chr17 26764729 26764798 -58673682 + L2 LINE L2 3227 3309 -4 464 307 38 9 chr17 26764798 26765010 -58673470 + L2 LINE L2 2437 2654 -660 228 310 57 32 chr17 26765217 26765375 -58673105 + L2 LINE L2 2988 3149 -164 2133 110 7 7 chr17 26765428 26765737 -58672743 + AluSx SINE Alu 1 309 -3 820 169 0 0 chr17 26766332 26766456 -58672024 + FRAM SINE Alu 6 129 -47 922 70 0 0 chr17 26766468 26766583 -58671897 - AluSc SINE Alu -15 294 180 669 73 0 0 chr17 26766686 26766782 -58671698 - L1MA9 LINE L1 -370 5942 5847 670 79 11 0 chr17 26766811 26766900 -58671580 + AluSp SINE Alu 1 90 -223 2664 32 0 0 chr17 26766900 26767210 -58671270 + AluY SINE Alu 1 310 -1 1488 146 9 0 chr17 26767208 26767441 -58671039 + AluSp SINE Alu 75 309 -4 * 323 329 116 19 chr17 26767620 26767775 -58670705 + MIR SINE MIR 64 233 -29 1123 229 71 68 chr17 26767816 26768019 -58670461 - MLT1B LTR MaLR -8 382 176 1970 147 0 6 chr17 26768019 26768331 -58670149 - AluJb SINE Alu -2 310 1 1123 229 71 68 chr17 26768331 26768507 -58669973 - MLT1B LTR MaLR -214 176 2 2019 132 0 28 chr17 26768560 26768879 -58669601 - AluSx SINE Alu -2 310 1 2040 119 0 32 chr17 26768879 26769189 -58669291 - AluSx SINE Alu -12 300 1 1692 174 32 0 chr17 26769651 26769932 -58668548 + AluJo SINE Alu 7 296 -16 1641 183 58 56 chr17 26769932 26770299 -58668181 + MLT1C LTR MaLR 35 405 -62 1867 162 0 7 chr17 26770299 26770602 -58667878 + AluJb SINE Alu 9 309 -3 1641 183 58 56 chr17 26770602 26770666 -58667814 + MLT1C LTR MaLR 405 467 0 410 340 73 5 chr17 26770837 26771028 -58667452 - MIR SINE MIR -36 226 23 1950 141 0 10 chr17 26771240 26771537 -58666943 - AluJb SINE Alu 0 312 19 233 273 114 30 chr17 26772053 26772185 -58666295 + MIR SINE MIR 29 171 -91 482 251 114 119 chr17 26772253 26772707 -58665773 + L2 LINE L2 2379 2834 -479 1903 157 0 3 chr17 26772707 26773006 -58665474 + AluJb SINE Alu 1 298 -14 482 251 114 119 chr17 26773006 26773341 -58665139 + L2 LINE L2 2834 3308 -5 1739 182 14 0 chr17 26773364 26773655 -58664825 + AluJo SINE Alu 1 295 -17 237 321 92 42 chr17 26773733 26773973 -58664507 + L2 LINE L2 2624 2875 -439 745 263 127 20 chr17 26774289 26774712 -58663768 - L2 LINE L2 -209 3104 2648 187 309 141 0 chr17 26775084 26775233 -58663247 + L2 LINE L2 2887 3056 -216 627 250 30 63 chr17 26775660 26775805 -58662675 - L2 LINE L2 -8 3305 3157 1756 142 51 7 chr17 26775805 26776100 -58662380 - AluJo SINE Alu -4 308 1 2321 106 0 0 chr17 26776107 26776419 -58662061 - AluSx SINE Alu 0 312 1 627 250 30 63 chr17 26776419 26776714 -58661766 - L2 LINE L2 -162 3151 2796 788 208 153 0 chr17 26776800 26776983 -58661497 + MER58C DNA MER1_type 4 214 -1 1911 130 3 19 chr17 26776989 26777296 -58661184 - AluJb SINE Alu -6 306 5 584 254 32 32 chr17 26777329 26777518 -58660962 + MER20 DNA MER1_type 11 199 -20 1634 185 10 10 chr17 26777790 26778092 -58660388 - AluJo SINE Alu -8 304 3 453 353 111 21 chr17 26778099 26778476 -58660004 - L2 LINE L2 -16 3297 2887 2181 118 0 10 chr17 26778611 26778924 -58659556 - AluSx SINE Alu -2 310 1 192 343 120 0 chr17 26778960 26779068 -58659412 + L2 LINE L2 3150 3270 -2 351 165 0 0 chr17 26780983 26781068 -58657412 + GA-rich Low_complexity Low_complexity 2 86 0 27 0 0 0 chr17 26781808 26781835 -58656645 + GC_rich Low_complexity Low_complexity 1 27 0 267 79 0 0 chr17 26782458 26782496 -58655984 + (A)n Simple_repeat Simple_repeat 1 38 0 21 89 0 0 chr17 26782615 26782671 -58655809 + GC_rich Low_complexity Low_complexity 1 56 0 35 63 0 0 chr17 26782775 26782838 -58655642 + GC_rich Low_complexity Low_complexity 1 63 0 28 86 0 0 chr17 26782944 26783014 -58655466 + GC_rich Low_complexity Low_complexity 1 70 0 285 51 0 0 chr17 26786868 26786907 -58651573 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 665 71 0 0 chr17 26786910 26786994 -58651486 - AluSx SINE Alu -35 274 191 1072 96 0 0 chr17 26786995 26787131 -58651349 - AluSx SINE Alu -172 141 6 532 128 0 0 chr17 26787137 26787215 -58651265 - AluJo SINE Alu -16 296 219 833 177 21 0 chr17 26787220 26787361 -58651119 - AluJo SINE Alu -155 157 14 1881 131 0 44 chr17 26787505 26787843 -58650637 - AluSx SINE Alu 0 325 1 2286 99 3 0 chr17 26787851 26788163 -58650317 - AluSp SINE Alu 0 313 1 190 261 297 24 chr17 26788168 26788333 -58650147 - L2 LINE L2 -774 2540 2331 244 306 56 0 chr17 26788400 26788472 -58650008 - MIR SINE MIR -70 192 117 2089 107 7 0 chr17 26788510 26788801 -58649679 + AluSx SINE Alu 1 293 -19 1665 160 15 0 chr17 26788885 26789154 -58649326 - AluJb SINE Alu -39 273 1 250 351 60 0 chr17 26789168 26789302 -58649178 - L2 LINE L2 -481 2833 2692 1177 178 111 41 chr17 26789306 26789576 -58648904 + 7SLRNA srpRNA srpRNA 1 289 -31 2313 76 0 0 chr17 26789684 26790014 -58648466 + AluY SINE Alu 1 311 0 2055 181 52 69 chr17 26790026 26790061 -58648419 + L1MB5 LINE L1 5587 5621 -553 1988 133 0 17 chr17 26790061 26790362 -58648118 + AluJo SINE Alu 1 296 -16 2055 181 52 69 chr17 26790362 26790922 -58647558 + L1MB5 LINE L1 5621 6172 -2 2075 86 7 21 chr17 26790936 26791073 -58647407 + AluSg SINE Alu 8 145 -165 8174 52 1 0 chr17 26791073 26792041 -58646439 + LTR5 LTR ERVK 1 969 0 2075 86 7 21 chr17 26792041 26792194 -58646286 + AluSg SINE Alu 145 294 -16 1871 141 23 3 chr17 26792201 26792505 -58645975 + AluSx SINE Alu 1 310 -2 207 139 0 0 chr17 26792505 26792541 -58645939 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 856 174 0 7 chr17 26792555 26792699 -58645781 + FRAM SINE Alu 12 154 -22 32 26 0 0 chr17 26792699 26792738 -58645742 + AT_rich Low_complexity Low_complexity 1 39 0 1003 87 0 0 chr17 26792745 26792872 -58645608 + FLAM_C SINE Alu 2 128 -5 231 361 98 30 chr17 26792887 26793020 -58645460 - L2 LINE L2 -662 2652 2511 2536 55 0 0 chr17 26793096 26793407 -58645073 + AluY SINE Alu 1 311 0 1299 122 0 0 chr17 26793413 26793594 -58644886 + AluSg/x SINE Alu 120 300 -10 302 73 0 0 chr17 26793674 26793715 -58644765 - FLAM SINE Alu -22 111 71 535 244 108 17 chr17 26793715 26793891 -58644589 + L2 LINE L2 3121 3312 -1 456 290 24 0 chr17 26795294 26795418 -58643062 - Charlie8 DNA MER1_type -2202 215 89 1212 273 31 3 chr17 26795428 26795787 -58642693 + L1ME3 LINE L1 5589 5957 -205 710 197 165 0 chr17 26795805 26795993 -58642487 - MER20 DNA MER1_type 0 219 1 2210 109 0 7 chr17 26795995 26796299 -58642181 + AluSx SINE Alu 3 304 -8 345 297 17 8 chr17 26796336 26796469 -58642011 + L1ME3 LINE L1 6003 6137 -25 1430 166 25 0 chr17 26796481 26796765 -58641715 + L1MB7 LINE L1 5840 6130 -54 2058 142 0 0 chr17 26796776 26797078 -58641402 + AluSx SINE Alu 1 302 -10 1695 150 10 42 chr17 26797093 26797219 -58641261 + AluJo SINE Alu 1 129 -183 2373 84 0 0 chr17 26797219 26797515 -58640965 - AluSx SINE Alu -15 297 2 1695 150 10 42 chr17 26797515 26797701 -58640779 + AluJo SINE Alu 129 303 -9 35 41 0 0 chr17 26797740 26797789 -58640691 + AT_rich Low_complexity Low_complexity 1 49 0 2135 121 3 0 chr17 26798420 26798727 -58639753 + AluSx SINE Alu 1 308 -4 2134 98 3 3 chr17 26798764 26799059 -58639421 + AluSx SINE Alu 1 295 -17 1309 122 6 0 chr17 26799065 26799246 -58639234 - AluJo SINE Alu -130 182 1 1801 174 13 19 chr17 26799248 26799622 -58638858 - Tigger2a DNA MER2_type -62 372 1 2254 115 0 0 chr17 26799630 26799935 -58638545 - AluSx SINE Alu -7 305 1 540 123 0 0 chr17 26799938 26800019 -58638461 - MLT1A1 LTR MaLR -61 304 224 1631 115 0 0 chr17 26800019 26800237 -58638243 - AluSx SINE Alu -94 218 1 1866 152 3 19 chr17 26800244 26800425 -58638055 - AluJb SINE Alu -1 311 136 2221 104 0 3 chr17 26800425 26800722 -58637758 - AluSc SINE Alu -13 296 1 1866 152 3 19 chr17 26800722 26800856 -58637624 - AluJb SINE Alu -176 136 1 3713 137 0 33 chr17 26800866 26801067 -58637413 - L1PA15 LINE L1 -2 6163 5957 2197 124 0 0 chr17 26801067 26801373 -58637107 - AluSx SINE Alu -6 306 1 3713 137 0 33 chr17 26801373 26801525 -58636955 - L1PA15 LINE L1 -208 5957 5802 2059 124 7 3 chr17 26801525 26801824 -58636656 - AluSx SINE Alu -12 300 1 3713 137 0 33 chr17 26801824 26802077 -58636403 - L1PA15 LINE L1 -363 5802 5576 466 195 220 0 chr17 26802087 26802205 -58636275 - MLT1A1 LTR MaLR -220 145 2 585 226 67 38 chr17 26802206 26802574 -58635906 + MLT1C LTR MaLR 69 467 0 1745 133 63 11 chr17 26802708 26802994 -58635486 - AluJo SINE Alu -9 303 3 2314 101 3 0 chr17 26803265 26803571 -58634909 - AluSx SINE Alu -3 309 3 291 213 0 175 chr17 26803582 26803630 -58634850 - Charlie8 DNA MER1_type -184 157 102 1870 112 3 24 chr17 26803630 26803948 -58634532 + AluSx SINE Alu 1 312 0 291 213 0 175 chr17 26803948 26803979 -58634501 - Charlie8 DNA MER1_type -239 102 67 2331 53 0 0 chr17 26803979 26804308 -58634172 + AluY SINE Alu 1 329 0 291 213 0 175 chr17 26804308 26804386 -58634094 - Charlie8 DNA MER1_type -274 67 26 239 260 151 0 chr17 26804885 26804958 -58633522 - L2 LINE L2 -26 3246 3163 360 88 0 0 chr17 26805501 26805558 -58632922 + (TG)n Simple_repeat Simple_repeat 2 58 0 2270 113 0 0 chr17 26805672 26805981 -58632499 - AluSx SINE Alu -3 309 1 305 324 39 45 chr17 26806011 26806190 -58632290 - L2 LINE L2 -17 3296 3119 1763 174 0 10 chr17 26806234 26806532 -58631948 + AluJo SINE Alu 1 295 -17 1951 145 10 0 chr17 26806532 26806828 -58631652 + AluSx SINE Alu 1 299 -13 378 107 0 0 chr17 26806828 26806884 -58631596 + (GGGGA)n Simple_repeat Simple_repeat 1 56 0 238 307 40 0 chr17 26806907 26806982 -58631498 - L2 LINE L2 -610 2704 2627 2050 132 3 3 chr17 26807175 26807478 -58631002 - AluSx SINE Alu -9 303 1 634 172 50 89 chr17 26807528 26807661 -58630819 - MLT1A1 LTR MaLR -192 173 47 1879 167 0 13 chr17 26807661 26807973 -58630507 + AluSq SINE Alu 1 308 -5 634 172 50 89 chr17 26807973 26808019 -58630461 - MLT1A1 LTR MaLR -318 47 1 1069 253 80 50 chr17 26808068 26808242 -58630238 + MLT1D LTR MaLR 1 168 -337 1903 154 29 16 chr17 26808242 26808548 -58629932 + AluSx SINE Alu 1 310 -2 1069 253 80 50 chr17 26808548 26808578 -58629902 + MLT1D LTR MaLR 168 196 -309 1993 141 0 20 chr17 26808578 26808883 -58629597 + AluJb SINE Alu 13 311 -1 1069 253 80 50 chr17 26808883 26809116 -58629364 + MLT1D LTR MaLR 196 452 -53 243 224 0 35 chr17 26809170 26809228 -58629252 + MLT1D LTR MaLR 404 459 -8 414 184 13 0 chr17 26809234 26809310 -58629170 - MER2 DNA MER2_type -1 344 268 2052 125 0 10 chr17 26809316 26809604 -58628876 + AluSx SINE Alu 27 311 -1 1503 192 4 15 chr17 26809630 26809901 -58628579 + AluJo SINE Alu 13 280 -32 180 0 0 0 chr17 26809901 26809921 -58628559 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 37 32 0 16 chr17 26809924 26809959 -58628521 + AT_rich Low_complexity Low_complexity 1 35 -26 2416 68 3 46 chr17 26809959 26810149 -58628331 - AluY SINE Alu -1 310 138 2244 100 23 3 chr17 26810149 26810323 -58628157 - AluSc SINE Alu -2 307 123 189 0 0 0 chr17 26810323 26810344 -58628136 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2244 100 23 3 chr17 26810344 26810470 -58628010 - AluSc SINE Alu -186 123 1 2416 68 3 46 chr17 26810470 26810603 -58627877 - AluY SINE Alu -173 138 1 37 32 0 16 chr17 26810603 26810629 -58627851 + AT_rich Low_complexity Low_complexity 35 61 0 22 0 0 0 chr17 26810710 26810732 -58627748 + AT_rich Low_complexity Low_complexity 1 22 0 1501 129 0 9 chr17 26810732 26810942 -58627538 + AluSx SINE Alu 49 256 -56 320 174 0 14 chr17 26810947 26811016 -58627464 + (TA)n Simple_repeat Simple_repeat 1 68 0 696 180 16 0 chr17 26811016 26811144 -58627336 - MER2 DNA MER2_type -214 131 2 252 322 76 0 chr17 26811152 26811270 -58627210 + L2 LINE L2 1758 1884 -1430 273 290 47 0 chr17 26811296 26811403 -58627077 + L2 LINE L2 2013 2124 -1190 457 174 0 0 chr17 26811413 26811499 -58626981 + AluS SINE Alu 226 311 0 2265 110 3 0 chr17 26811501 26811811 -58626669 + AluY SINE Alu 1 311 0 2108 76 80 0 chr17 26811825 26812113 -58626367 + AluSq SINE Alu 1 309 0 303 157 5 78 chr17 26812264 26812455 -58626025 + CT-rich Low_complexity Low_complexity 1 177 0 323 246 12 18 chr17 26812508 26812679 -58625801 + C-rich Low_complexity Low_complexity 1 170 0 1541 189 57 79 chr17 26812721 26812842 -58625638 + MLT1C LTR MaLR 8 130 -337 1721 174 3 61 chr17 26812842 26812976 -58625504 + AluJb SINE Alu 1 141 -171 2374 62 0 59 chr17 26812976 26813283 -58625197 - AluY SINE Alu -20 291 3 2058 152 3 0 chr17 26813285 26813588 -58624892 - AluSx SINE Alu -8 304 1 1721 174 3 61 chr17 26813588 26813778 -58624702 + AluJb SINE Alu 142 309 -3 1541 189 57 79 chr17 26813778 26814126 -58624354 + MLT1C LTR MaLR 130 467 0 842 295 134 8 chr17 26814127 26814493 -58623987 - LTR16C LTR ERVL -9 482 71 874 245 166 59 chr17 26814512 26814693 -58623787 + MLT1E LTR MaLR 1 161 -432 2071 125 17 0 chr17 26814693 26814980 -58623500 - AluSg SINE Alu -18 292 1 874 245 166 59 chr17 26814980 26815190 -58623290 + MLT1E LTR MaLR 161 434 -159 288 0 0 0 chr17 26815247 26815279 -58623201 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 1061 147 0 7 chr17 26815285 26815435 -58623045 - AluJo/FRAM SINE Alu -30 282 134 2087 153 3 0 chr17 26815435 26815736 -58622744 - AluSx SINE Alu -4 308 7 1792 139 28 6 chr17 26815746 26816070 -58622410 - L1MA8 LINE L1 -3 6288 5958 1874 174 0 0 chr17 26816070 26816363 -58622117 - AluJb SINE Alu -9 303 11 1904 97 0 0 chr17 26816365 26816602 -58621878 - AluSg SINE Alu -71 239 3 422 331 12 0 chr17 26816632 26816792 -58621688 + L2 LINE L2 2466 2627 -687 1470 196 82 11 chr17 26816841 26817009 -58621471 - AluJo SINE Alu -11 301 104 2060 125 7 14 chr17 26817009 26817306 -58621174 - AluSx SINE Alu -17 295 1 1470 196 82 11 chr17 26817306 26817418 -58621062 - AluJo SINE Alu -208 104 1 483 323 79 16 chr17 26817473 26817662 -58620818 - MIR SINE MIR -7 255 55 1976 145 0 42 chr17 26817667 26817832 -58620648 - AluSx SINE Alu -15 297 127 183 100 0 0 chr17 26817832 26817862 -58620618 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2203 93 0 4 chr17 26817866 26818145 -58620335 - AluSp SINE Alu -35 278 1 2053 91 4 8 chr17 26818145 26818408 -58620072 - AluSc SINE Alu -9 300 38 1976 145 0 42 chr17 26818408 26818546 -58619934 - AluSx SINE Alu -186 126 1 2457 90 3 0 chr17 26818729 26819040 -58619440 + AluSp SINE Alu 2 313 0 1035 207 28 0 chr17 26819486 26819699 -58618781 + MER20 DNA MER1_type 1 219 0 203 361 0 12 chr17 26820113 26820196 -58618284 - MIR SINE MIR -89 173 92 993 125 13 13 chr17 26820289 26820441 -58618039 + AluSx SINE Alu 2 153 -159 1633 132 58 0 chr17 26820563 26820806 -58617674 + AluSq SINE Alu 1 257 -56 677 75 0 21 chr17 26820811 26820905 -58617575 - AluS SINE Alu -220 93 2 698 185 0 15 chr17 26820963 26821098 -58617382 - FLAM_A SINE Alu 0 133 1 624 250 21 0 chr17 26821101 26821245 -58617235 - MIR SINE MIR -98 164 18 2173 116 17 3 chr17 26821311 26821603 -58616877 + AluSx SINE Alu 1 296 -16 2708 48 0 0 chr17 26821603 26821914 -58616566 + AluY SINE Alu 1 311 0 2247 88 51 0 chr17 26821915 26822210 -58616270 + AluSx SINE Alu 1 310 -2 220 319 11 11 chr17 26822211 26822302 -58616178 - L2 LINE L2 -317 2955 2865 417 300 75 12 chr17 26822341 26822501 -58615979 - MIR SINE MIR -59 203 34 281 344 0 48 chr17 26823628 26823817 -58614663 + C-rich Low_complexity Low_complexity 1 180 0 * 326 243 7 57 chr17 26823781 26823921 -58614559 + CT-rich Low_complexity Low_complexity 3 135 0 247 316 7 37 chr17 26824522 26824658 -58613822 + CT-rich Low_complexity Low_complexity 4 135 0 367 185 49 12 chr17 26825204 26825285 -58613195 + MIR SINE MIR 70 153 -109 490 122 11 0 chr17 26825298 26825388 -58613092 + FLAM_A SINE Alu 42 132 -10 2166 113 6 26 chr17 26825415 26825726 -58612754 + AluSx SINE Alu 1 305 -7 508 147 0 0 chr17 26825835 26825910 -58612570 - AluS SINE Alu -237 76 2 249 284 45 0 chr17 26825933 26826000 -58612480 + L2 LINE L2 3244 3313 0 1290 180 124 8 chr17 26826082 26826332 -58612148 + AluJo SINE Alu 2 280 -32 1463 231 117 5 chr17 26826333 26826778 -58611702 + L1ME3 LINE L1 5644 6138 -24 808 154 0 22 chr17 26826804 26826940 -58611540 + FLAM_A SINE Alu 1 133 0 2002 138 0 46 chr17 26826943 26827088 -58611392 + AluSx SINE Alu 1 151 -161 2177 103 21 3 chr17 26827088 26827378 -58611102 + AluSg SINE Alu 1 295 -15 2002 138 0 46 chr17 26827378 26827559 -58610921 + AluSx SINE Alu 151 312 0 1876 176 0 26 chr17 26827563 26827875 -58610605 + AluJo SINE Alu 2 305 -7 401 304 24 8 chr17 26828648 26828773 -58609707 + MIR SINE MIR 123 249 -13 2179 120 23 19 chr17 26828776 26828948 -58609532 - AluSq SINE Alu -3 310 135 2625 64 0 0 chr17 26828948 26829259 -58609221 - AluY SINE Alu 0 311 1 2179 120 23 19 chr17 26829259 26829394 -58609086 - AluSq SINE Alu -178 135 2 673 144 0 32 chr17 26829426 26829551 -58608929 + FLAM_C SINE Alu 23 143 0 266 271 43 0 chr17 26829554 26829624 -58608856 - MIR SINE MIR -72 190 118 2443 72 0 3 chr17 26829891 26830184 -58608296 - AluY SINE Alu -19 292 1 2163 128 28 75 chr17 26830272 26830449 -58608031 + MSTA LTR MaLR 1 185 -243 2185 134 0 7 chr17 26830449 26830755 -58607725 - AluSx SINE Alu -8 304 1 2163 128 28 75 chr17 26830755 26830971 -58607509 + MSTA LTR MaLR 185 377 -51 2278 106 0 0 chr17 26830971 26831291 -58607189 + AluSx SINE Alu 1 320 0 2163 128 28 75 chr17 26831291 26831322 -58607158 + MSTA LTR MaLR 377 408 -20 510 221 0 33 chr17 26831492 26831614 -58606866 - LTR16C LTR ERVL 0 491 374 399 247 34 62 chr17 26831614 26831713 -58606767 + MLT1G1 LTR MaLR 3 98 -497 2049 128 152 11 chr17 26831713 26832088 -58606392 - MSTA LTR MaLR 0 428 1 399 247 34 62 chr17 26832088 26832134 -58606346 + MLT1G1 LTR MaLR 98 144 -451 478 179 259 0 chr17 26832134 26832246 -58606234 - AluJo SINE Alu -169 143 3 2164 130 0 3 chr17 26832257 26832550 -58605930 - AluSx SINE Alu -20 292 1 568 182 36 18 chr17 26832879 26832961 -58605519 + CT-rich Low_complexity Low_complexity 1 80 -88 2464 65 0 49 chr17 26832961 26833286 -58605194 - AluY SINE Alu -2 309 1 568 182 36 18 chr17 26833286 26833368 -58605112 + CT-rich Low_complexity Low_complexity 80 168 0 2018 110 67 0 chr17 26833368 26833650 -58604830 - AluSg SINE Alu -9 301 1 2117 120 11 0 chr17 26833652 26833935 -58604545 - AluSx SINE Alu -16 296 11 2970 152 44 46 chr17 26833951 26834089 -58604391 - L1MA7 LINE L1 0 6291 6154 728 178 0 8 chr17 26834089 26834218 -58604262 - FLAM_C SINE Alu -5 128 1 2970 152 44 46 chr17 26834218 26834274 -58604206 - L1MA7 LINE L1 -137 6154 6099 2391 104 0 0 chr17 26834274 26834581 -58603899 + AluSg1 SINE Alu 1 307 -2 2970 152 44 46 chr17 26834581 26835043 -58603437 - L1MA7 LINE L1 -192 6099 5635 2194 104 0 30 chr17 26835048 26835345 -58603135 - AluY SINE Alu -23 288 1 1157 75 0 0 chr17 26835345 26835479 -58603001 - AluSg SINE Alu -176 134 1 1570 124 22 91 chr17 26835479 26835754 -58602726 - AluSx SINE Alu -13 299 44 847 125 0 23 chr17 26835754 26835882 -58602598 + AluSg/x SINE Alu 184 308 -4 911 228 149 94 chr17 26835983 26836336 -58602144 - MLT1D LTR MaLR -9 496 164 1837 137 29 177 chr17 26836336 26836478 -58602002 + LTR26B LTR ERV1 3 164 -367 2432 90 0 0 chr17 26836478 26836779 -58601701 + AluSp SINE Alu 3 303 -10 1837 137 29 177 chr17 26836779 26836831 -58601649 + LTR26B LTR ERV1 164 222 -309 2430 97 7 0 chr17 26836831 26837141 -58601339 - AluSx SINE Alu 0 312 1 1837 137 29 177 chr17 26837141 26837426 -58601054 + LTR26B LTR ERV1 222 373 -158 2189 126 7 16 chr17 26837426 26837736 -58600744 - AluSx SINE Alu -1 311 5 1837 137 29 177 chr17 26837736 26837875 -58600605 + LTR26B LTR ERV1 373 531 0 911 228 149 94 chr17 26837875 26837900 -58600580 - MLT1D LTR MaLR -341 164 142 1859 173 0 13 chr17 26837900 26838201 -58600279 + AluJb SINE Alu 1 297 -15 2338 97 3 0 chr17 26838204 26838502 -58599978 + AluSq SINE Alu 1 299 -14 911 228 149 94 chr17 26838502 26838588 -58599892 - MLT1D LTR MaLR -364 141 1 945 269 44 62 chr17 26839106 26839127 -58599353 - L2 LINE L2 0 3313 3293 1873 153 14 3 chr17 26839127 26839421 -58599059 - AluSx SINE Alu -15 297 1 945 269 44 62 chr17 26839421 26839622 -58598858 - L2 LINE L2 -20 3293 3090 2027 135 3 0 chr17 26839622 26839904 -58598576 + AluSx SINE Alu 16 298 -14 945 269 44 62 chr17 26839904 26840130 -58598350 - L2 LINE L2 -223 3090 2872 1242 237 219 17 chr17 26840491 26840967 -58597513 + MLT1E2 LTR MaLR 55 626 0 2194 118 0 0 chr17 26841215 26841511 -58596969 + AluSx SINE Alu 1 296 -16 355 278 117 61 chr17 26842220 26842315 -58596165 + MIR SINE MIR 47 135 -127 2271 112 0 0 chr17 26842315 26842609 -58595871 + AluSx SINE Alu 1 294 -18 355 278 117 61 chr17 26842609 26842693 -58595787 + MIR SINE MIR 135 236 -26 2454 73 3 7 chr17 26842852 26843153 -58595327 - AluSg SINE Alu -10 300 1 1014 192 0 12 chr17 26843162 26843329 -58595151 - AluJ SINE Alu -10 302 138 741 268 160 26 chr17 26843418 26843761 -58594719 + L2 LINE L2 2925 3313 0 1913 149 31 0 chr17 26843928 26844217 -58594263 - AluJb SINE Alu -14 298 1 679 146 54 8 chr17 26844231 26844361 -58594119 - AluJ SINE Alu -175 137 2 2255 99 3 0 chr17 26844394 26844714 -58593766 + AluSq SINE Alu 2 322 0 332 278 183 0 chr17 26844714 26844840 -58593640 - MER91A DNA MER1_type -47 149 1 312 27 0 0 chr17 26845578 26845615 -58592865 + (A)n Simple_repeat Simple_repeat 1 37 0 2497 51 3 0 chr17 26846611 26846903 -58591577 + AluY SINE Alu 1 293 -18 1066 238 151 48 chr17 26847022 26847485 -58590995 + MLT1H LTR MaLR 22 532 -17 2190 113 10 13 chr17 26847485 26847795 -58590685 - AluSx SINE Alu -3 309 1 2353 94 13 0 chr17 26848043 26848350 -58590130 - AluSx SINE Alu 0 312 2 554 291 29 8 chr17 26848354 26848598 -58589882 + L2 LINE L2 2807 3055 -258 2439 107 0 0 chr17 26848735 26849077 -58589403 - AluSx SINE Alu 0 342 1 778 112 0 77 chr17 26849164 26849307 -58589173 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr17 26849759 26849780 -58588700 + AT_rich Low_complexity Low_complexity 1 21 0 768 218 93 35 chr17 26850289 26850492 -58587988 - MIR SINE MIR -33 229 10 196 293 13 40 chr17 26850511 26850586 -58587894 - MIR SINE MIR 0 262 190 451 258 106 71 chr17 26850788 26850913 -58587567 + MIR SINE MIR 1 120 -142 1667 145 0 52 chr17 26850913 26851182 -58587298 + AluSx SINE Alu 37 291 -21 451 258 106 71 chr17 26851182 26851238 -58587242 + MIR SINE MIR 120 192 -70 1524 157 122 16 chr17 26851238 26851493 -58586987 + AluJo SINE Alu 1 282 -30 451 258 106 71 chr17 26851493 26851508 -58586972 + MIR SINE MIR 192 205 -57 465 288 52 2 chr17 26851559 26851799 -58586681 - MLT1J2 LTR MaLR -31 419 125 403 190 9 86 chr17 26851838 26851954 -58586526 + AluJb SINE Alu 87 193 -119 226 286 0 0 chr17 26851954 26852010 -58586470 + MER66B LTR ERV1 1 56 -430 1966 81 0 0 chr17 26852013 26852248 -58586232 + AluSq SINE Alu 1 235 -78 2536 172 44 2 chr17 26852250 26852727 -58585753 + L1MB3 LINE L1 5643 6139 -44 1892 154 14 7 chr17 26852730 26853016 -58585464 + AluJb SINE Alu 1 288 -24 1139 157 73 70 chr17 26853094 26853380 -58585100 + L1MB7 LINE L1 5882 6168 -16 189 0 0 0 chr17 26853418 26853439 -58585041 + (CA)n Simple_repeat Simple_repeat 2 22 0 222 37 0 0 chr17 26853526 26853553 -58584927 + (TC)n Simple_repeat Simple_repeat 2 28 0 2091 148 3 0 chr17 26853648 26853951 -58584529 + AluJb SINE Alu 1 304 -8 806 189 0 20 chr17 26853963 26854111 -58584369 + FRAM SINE Alu 11 155 -21 1384 168 8 120 chr17 26854121 26854472 -58584008 - AluJb SINE Alu 0 312 1 532 248 37 51 chr17 26855004 26855141 -58583339 + MER2 DNA MER2_type 1 135 -210 1174 190 145 22 chr17 26855141 26855410 -58583070 - AluJo SINE Alu 0 302 1 532 248 37 51 chr17 26855410 26855486 -58582994 + MER2 DNA MER2_type 135 211 -134 1095 172 91 10 chr17 26855712 26855921 -58582559 + AluJo SINE Alu 82 307 -5 632 278 51 68 chr17 26855922 26856389 -58582091 + L1M4 LINE L1 4159 4617 -1529 832 127 0 0 chr17 26856400 26856510 -58581970 - AluJb SINE Alu -25 287 178 2202 104 17 0 chr17 26856594 26856891 -58581589 - AluY SINE Alu -9 302 1 225 94 0 0 chr17 26858090 26858122 -58580358 + (A)n Simple_repeat Simple_repeat 1 32 0 2148 143 0 3 chr17 26858193 26858501 -58579979 - AluJb SINE Alu -5 307 1 213 94 0 0 chr17 26861483 26861515 -58576965 + (A)n Simple_repeat Simple_repeat 1 32 0 198 0 0 0 chr17 26861855 26861877 -58576603 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 26 50 0 0 chr17 26862211 26862251 -58576229 + AT_rich Low_complexity Low_complexity 1 40 0 1681 219 148 28 chr17 26862869 26863199 -58575281 + L1MC4 LINE L1 6960 7249 -793 1685 166 13 46 chr17 26863199 26863506 -58574974 - AluJb SINE Alu -14 298 2 1681 219 148 28 chr17 26863506 26863811 -58574669 + L1MC4 LINE L1 7249 7671 -371 689 225 193 0 chr17 26863981 26864199 -58574281 + MIR SINE MIR 2 261 -1 1950 139 4 0 chr17 26864532 26864813 -58573667 - AluJb SINE Alu -17 295 14 843 273 83 16 chr17 26864908 26865271 -58573209 - L1MC4 LINE L1 -43 7999 7613 853 80 0 43 chr17 26868500 26868688 -58569792 + (TA)n Simple_repeat Simple_repeat 1 180 0 965 170 0 0 chr17 26868688 26868841 -58569639 - AluJb SINE Alu -22 290 138 223 178 0 0 chr17 26868846 26868891 -58569589 + (TA)n Simple_repeat Simple_repeat 1 45 0 767 192 0 0 chr17 26868897 26869027 -58569453 + FLAM_C SINE Alu 2 131 -12 1192 160 26 120 chr17 26869057 26869287 -58569193 + L1M4 LINE L1 4964 5214 -932 2085 148 0 3 chr17 26869287 26869598 -58568882 - AluSx SINE Alu -2 310 1 1192 160 26 120 chr17 26869598 26869679 -58568801 + L1M4 LINE L1 5214 5241 -905 1921 143 9 19 chr17 26869679 26869994 -58568486 - AluJb SINE Alu 0 312 1 1192 160 26 120 chr17 26869994 26870031 -58568449 + L1M4 LINE L1 5241 5280 -866 1286 98 0 0 chr17 26870031 26870204 -58568276 - AluY SINE Alu -14 297 125 843 273 83 16 chr17 26871421 26871784 -58566696 + L1MC4 LINE L1 7613 7999 -43 1950 139 4 0 chr17 26871879 26872160 -58566320 + AluJb SINE Alu 14 295 -17 689 225 193 0 chr17 26872493 26872711 -58565769 - MIR SINE MIR -1 261 2 1681 219 148 28 chr17 26872881 26873186 -58565294 - L1MC4 LINE L1 -371 7671 7404 1685 166 13 46 chr17 26873186 26873493 -58564987 + AluJb SINE Alu 2 298 -14 1681 219 148 28 chr17 26873493 26873823 -58564657 - L1MC4 LINE L1 -638 7404 6960 26 50 0 0 chr17 26874441 26874481 -58563999 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 26874815 26874837 -58563643 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 222 91 0 0 chr17 26875177 26875210 -58563270 + (T)n Simple_repeat Simple_repeat 1 33 0 485 76 59 0 chr17 26875952 26876070 -58562410 + (TA)n Simple_repeat Simple_repeat 1 125 0 2062 136 3 0 chr17 26876570 26876864 -58561616 + AluSc SINE Alu 1 295 -14 248 302 22 62 chr17 26876987 26877166 -58561314 + MIR3 SINE MIR 37 208 0 326 127 6 45 chr17 26877861 26877932 -58560548 - FAM SINE Alu -84 91 29 22 0 0 0 chr17 26878069 26878091 -58560389 + AT_rich Low_complexity Low_complexity 1 22 0 2544 76 0 13 chr17 26878137 26878453 -58560027 + AluSp SINE Alu 1 312 -1 282 87 0 0 chr17 26878455 26878501 -58559979 + (TA)n Simple_repeat Simple_repeat 1 46 0 23 68 0 0 chr17 26878586 26878630 -58559850 + AT_rich Low_complexity Low_complexity 1 44 0 203 184 0 0 chr17 26878856 26878894 -58559586 + (TA)n Simple_repeat Simple_repeat 1 38 0 2296 113 7 0 chr17 26878943 26879252 -58559228 - AluSp SINE Alu -2 311 1 2940 103 15 8 chr17 26879505 26879993 -58558487 + MER1A DNA MER1_type 1 529 0 2285 110 3 3 chr17 26880193 26880503 -58557977 - AluSq SINE Alu -3 310 1 330 233 196 31 chr17 26881405 26881568 -58556912 + MIR SINE MIR 73 262 0 205 308 162 0 chr17 26881646 26881763 -58556717 + MIR SINE MIR 48 183 -79 197 182 91 18 chr17 26881902 26881957 -58556523 + L2 LINE L2 3247 3305 -8 192 174 130 0 chr17 26882252 26882298 -58556182 + MIR SINE MIR 206 257 -5 249 211 0 0 chr17 26883389 26883441 -58555039 - L1MC4 LINE L1 -1339 6703 6652 300 53 0 0 chr17 26883442 26883480 -58555000 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 57 0 0 chr17 26883831 26883866 -58554614 + AT_rich Low_complexity Low_complexity 1 35 0 2377 41 3 31 chr17 26884002 26884317 -58554163 + AluY SINE Alu 1 307 0 474 215 31 54 chr17 26884839 26884969 -58553511 + MLT1K LTR MaLR 447 573 -15 621 192 28 22 chr17 26885857 26886011 -58552469 + L1P1 LINE L1 5357 5518 -637 509 167 54 152 chr17 26886063 26886321 -58552159 + MER33 DNA MER1_type 1 221 -87 600 178 9 0 chr17 26886375 26886482 -58551998 - FLAM_A SINE Alu -33 109 2 478 140 0 105 chr17 26886483 26886597 -58551883 + MER33 DNA MER1_type 257 358 -5 1251 259 93 56 chr17 26886607 26887255 -58551225 + HAL1 LINE L1 1524 2195 -312 2099 80 25 0 chr17 26887426 26887722 -58550758 + AluY SINE Alu 1 303 0 420 67 0 0 chr17 26888498 26888558 -58549922 + (TG)n Simple_repeat Simple_repeat 2 61 0 21 57 0 0 chr17 26891219 26891254 -58547226 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 26891694 26891723 -58546757 + GC_rich Low_complexity Low_complexity 1 29 0 1493 142 25 82 chr17 26892324 26892641 -58545839 - AluJb SINE Alu -13 299 1 1882 111 18 90 chr17 26893143 26893477 -58545003 + AluSx SINE Alu 1 310 -2 1504 180 33 4 chr17 26893957 26894201 -58544279 + AluJb SINE Alu 1 251 -61 579 106 0 138 chr17 26894201 26894277 -58544203 + LTR5 LTR ERVK 1 56 -913 7735 24 1 2 chr17 26894277 26895305 -58543175 + L1PA3 LINE L1 5141 6167 0 579 106 0 138 chr17 26895305 26895350 -58543130 + LTR5 LTR ERVK 56 106 -863 8608 60 6 19 chr17 26895350 26895580 -58542900 + MER11C LTR ERVK 1 232 -839 2560 71 0 0 chr17 26895580 26895891 -58542589 - AluY SINE Alu 0 311 1 8608 60 6 19 chr17 26895891 26896743 -58541737 + MER11C LTR ERVK 232 1069 -2 4263 159 25 52 chr17 26896745 26897638 -58540842 + LTR5 LTR ERVK 101 969 0 351 143 32 0 chr17 26897646 26897709 -58540771 + AluJb SINE Alu 238 302 0 285 125 0 0 chr17 26897712 26897752 -58540728 + Alu SINE Alu 1 40 -259 1258 238 72 83 chr17 26897752 26897832 -58540648 - L1M4 LINE L1 -2112 4034 3955 2020 105 0 89 chr17 26897832 26897993 -58540487 - AluSg SINE Alu -15 295 176 2478 71 0 43 chr17 26897993 26898317 -58540163 - AluY SINE Alu -1 310 1 2020 105 0 89 chr17 26898317 26898479 -58540001 - AluSg SINE Alu -134 176 1 1258 238 72 83 chr17 26898479 26898864 -58539616 - L1M4 LINE L1 -2191 3955 3577 2141 108 0 3 chr17 26898864 26899150 -58539330 - AluSc SINE Alu -23 286 2 1258 238 72 83 chr17 26899150 26899414 -58539066 - L1M4 LINE L1 -2569 3577 3312 2269 112 6 6 chr17 26899425 26899737 -58538743 - AluSx SINE Alu 0 312 1 460 207 60 9 chr17 26899752 26899868 -58538612 + L1ME4a LINE L1 5978 6099 -22 365 279 19 51 chr17 26899907 26899999 -58538481 + L1ME4a LINE L1 5955 6041 -80 1923 134 34 10 chr17 26899999 26900290 -58538190 - AluSx SINE Alu -13 299 2 365 279 19 51 chr17 26900290 26900355 -58538125 + L1ME4a LINE L1 6041 6107 -14 1865 130 63 7 chr17 26900517 26900802 -58537678 + AluSx SINE Alu 1 301 -11 225 306 38 82 chr17 26900821 26901004 -58537476 + L3 LINE CR1 1243 1417 -160 204 283 40 20 chr17 26901010 26901109 -58537371 + MER5A DNA MER1_type 4 104 -85 2356 101 0 19 chr17 26901135 26901453 -58537027 + AluSq SINE Alu 1 312 -1 230 147 0 0 chr17 26901504 26901538 -58536942 - Alu SINE Alu -17 285 252 235 241 0 13 chr17 26901618 26901697 -58536783 - L1M4 LINE L1 -1923 4223 4146 996 187 89 9 chr17 26901698 26901912 -58536568 - AluJo SINE Alu 0 312 82 632 190 81 81 chr17 26902156 26902232 -58536248 - MER2 DNA MER2_type -134 211 136 1307 178 148 19 chr17 26902232 26902496 -58535984 + AluJo SINE Alu 1 298 -4 632 190 81 81 chr17 26902496 26902630 -58535850 - MER2 DNA MER2_type -208 137 1 385 111 0 32 chr17 26902845 26902908 -58535572 + LTR7 LTR ERV1 1 61 -389 1151 133 28 19 chr17 26902978 26903189 -58535291 + LTR7 LTR ERV1 238 450 0 1765 107 8 0 chr17 26903189 26903431 -58535049 + AluSp SINE Alu 70 313 0 570 273 53 47 chr17 26903755 26904074 -58534406 + L1M4 LINE L1 3873 4193 -1953 2386 88 0 3 chr17 26904131 26904428 -58534052 + AluSc SINE Alu 1 296 -13 1406 189 20 122 chr17 26904429 26904888 -58533592 - MLT2D LTR ERVL -2 412 1 385 203 30 54 chr17 26904974 26905134 -58533346 + MLT1G LTR MaLR 306 527 -63 2143 95 10 20 chr17 26905134 26905429 -58533051 - AluSx SINE Alu -20 292 1 385 203 30 54 chr17 26905429 26905487 -58532993 + MLT1G LTR MaLR 527 585 -5 1625 169 3 14 chr17 26905669 26905959 -58532521 - AluJb SINE Alu -17 295 9 299 106 0 0 chr17 26905959 26906006 -58532474 + Alu SINE Alu 255 301 0 1279 117 0 0 chr17 26906009 26906189 -58532291 + AluSg/x SINE Alu 121 300 -12 2314 103 0 0 chr17 26906302 26906603 -58531877 - AluSx SINE Alu -11 301 1 2399 257 106 34 chr17 26906665 26907467 -58531013 + L2 LINE L2 1152 1894 -1419 1959 145 17 0 chr17 26907467 26907763 -58530717 + AluJb SINE Alu 1 301 -11 2399 257 106 34 chr17 26907763 26907881 -58530599 + L2 LINE L2 1894 2002 -1311 2156 103 7 3 chr17 26907881 26908173 -58530307 - AluSg SINE Alu -19 291 1 2399 257 106 34 chr17 26908173 26908277 -58530203 + L2 LINE L2 2002 2097 -1216 2317 87 0 13 chr17 26908277 26908577 -58529903 - AluY SINE Alu -15 296 1 2399 257 106 34 chr17 26908577 26909318 -58529162 + L2 LINE L2 2097 3103 -210 2142 107 0 16 chr17 26909318 26909628 -58528852 + AluSx SINE Alu 1 305 -7 2399 257 106 34 chr17 26909628 26909759 -58528721 + L2 LINE L2 3103 3223 -90 576 121 0 0 chr17 26909763 26909846 -58528634 - 5S rRNA rRNA -32 89 7 343 195 85 0 chr17 26909888 26909970 -58528510 + L2 LINE L2 3225 3313 0 2333 57 3 17 chr17 26910126 26910426 -58528054 + AluY SINE Alu 1 296 -15 5612 132 21 5 chr17 26910428 26911543 -58526937 + L1PA16 LINE L1 5015 6150 -16 852 114 0 0 chr17 26912423 26912546 -58525934 - FRAM SINE Alu -8 168 46 950 100 0 0 chr17 26912735 26912865 -58525615 + AluSp/q SINE Alu 166 295 -18 688 307 110 63 chr17 26912867 26913356 -58525124 + L1M4 LINE L1 3982 4493 -1653 225 174 0 0 chr17 26914784 26914830 -58523650 + (TAAG)n Simple_repeat Simple_repeat 1 46 0 418 294 118 45 chr17 26914842 26915159 -58523321 + L1M4 LINE L1 4228 5393 -753 2857 186 51 10 chr17 26916419 26917012 -58521468 - L1PB4 LINE L1 0 6156 5540 256 351 36 26 chr17 26917202 26917507 -58520973 - L2 LINE L2 -509 2805 2498 263 289 111 33 chr17 26926215 26926395 -58512085 + L2 LINE L2 3108 3301 -12 411 266 65 0 chr17 26926420 26926544 -58511936 - MIR SINE MIR -43 219 88 5049 131 8 4 chr17 26927927 26928699 -58509781 + LTR5 LTR ERVK 2 776 -193 7442 37 9 9 chr17 26929252 26930908 -58507572 + L1PA5 LINE L1 4499 6154 0 1141 303 40 31 chr17 26934082 26934762 -58503718 - L1MC3 LINE L1 -1621 6164 5479 2168 109 0 0 chr17 26937359 26937662 -58500818 - AluY SINE Alu -8 303 1 193 269 13 77 chr17 26939778 26939856 -58498624 + MIR SINE MIR 99 171 -91 300 143 11 143 chr17 26939862 26939953 -58498527 + SN5 Other centromeric 300 378 -77 1596 149 111 32 chr17 26940464 26940806 -58497674 - THE1C LTR MaLR 0 375 7 363 277 0 0 chr17 26941954 26942091 -58496389 + (TG)n Simple_repeat Simple_repeat 1 137 0 3243 116 8 8 chr17 26942292 26942776 -58495704 - MER1A DNA MER1_type 0 529 46 902 187 22 11 chr17 26942965 26943147 -58495333 - MLT1C LTR MaLR 0 467 284 3873 205 95 71 chr17 26943178 26944324 -58494156 + MLT-int LTR MaLR 246 1419 -316 560 164 112 0 chr17 26944570 26944686 -58493794 - MLT1B-int LTR MaLR -1240 131 3 2055 180 13 13 chr17 26944695 26945079 -58493401 - MLT1B LTR MaLR -6 384 1 531 241 76 7 chr17 26945108 26945253 -58493227 - MLT1I LTR MaLR -198 211 57 4445 160 14 59 chr17 26945253 26946385 -58492095 + L1PA16 LINE L1 5005 6061 -105 262 155 0 17 chr17 26946386 26946444 -58492036 + L1PA16 LINE L1 6098 6154 -12 11613 153 68 11 chr17 26946445 26948559 -58489921 - Tigger1 DNA MER2_type -182 2236 3 500 200 56 8 chr17 26948562 26948687 -58489793 + MER2 DNA MER2_type 190 320 -25 206 62 31 0 chr17 26948860 26948892 -58489588 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 343 314 102 24 chr17 26948988 26949370 -58489110 + L1ME3A LINE L1 4567 4978 -1168 429 236 88 60 chr17 26950450 26950666 -58487814 - L2 LINE L2 0 3313 3092 430 281 62 0 chr17 26950740 26950886 -58487594 + MIR SINE MIR 14 168 -94 2256 269 71 21 chr17 26951038 26951220 -58487260 + L1ME3A LINE L1 5319 5490 -680 2015 122 0 7 chr17 26951220 26951530 -58486950 + AluSx SINE Alu 1 308 0 2256 269 71 21 chr17 26951530 26952149 -58486331 + L1ME3A LINE L1 5490 6161 -9 182 296 46 37 chr17 26952250 26952358 -58486122 - MIR3 SINE MIR 0 208 100 309 241 28 0 chr17 26952548 26952628 -58485852 - MIR SINE MIR -56 152 70 189 0 0 0 chr17 26953234 26953255 -58485225 + (TAAAAA)n Simple_repeat Simple_repeat 3 23 0 6293 90 28 7 chr17 26953317 26954549 -58483931 + L1PA13 LINE L1 4912 6163 0 805 115 0 16 chr17 26954777 26955012 -58483468 + AluSg1 SINE Alu 2 312 0 5378 40 5 8 chr17 26955014 26955661 -58482819 + SVA Other Other 733 1377 -9 290 317 66 44 chr17 26957531 26957758 -58480722 + MIR SINE MIR 31 262 0 1589 187 13 26 chr17 26958112 26958417 -58480063 + AluJo SINE Alu 1 301 -11 243 279 58 0 chr17 26958811 26958897 -58479583 - MIR SINE MIR -71 191 101 2295 146 85 15 chr17 26959881 26960279 -58478201 - MSTB LTR MaLR 0 426 1 332 184 79 0 chr17 26960471 26960547 -58477933 + L1MD2 LINE L1 6274 6355 -4 183 295 0 74 chr17 26961339 26961434 -58477046 - L2 LINE L2 -1294 2020 1933 411 261 92 7 chr17 26961904 26962057 -58476423 - MIR3 SINE MIR -17 191 26 2460 250 42 27 chr17 26962404 26963116 -58475364 + L1ME LINE L1 4475 5175 -996 1841 110 68 74 chr17 26963116 26963425 -58475055 + AluSg SINE Alu 1 307 -3 1934 120 35 60 chr17 26963429 26963745 -58474735 + AluSg SINE Alu 1 308 -2 2460 250 42 27 chr17 26963745 26963936 -58474544 + L1ME LINE L1 5177 5427 -744 1003 307 20 3 chr17 26963938 26964244 -58474236 + L1ME LINE L1 5481 5791 -379 343 186 57 0 chr17 26964263 26964333 -58474147 - MER5A DNA MER1_type -1 188 115 279 128 128 51 chr17 26964658 26964736 -58473744 + L1MB7 LINE L1 6047 6130 -54 1779 148 32 3 chr17 26964742 26965025 -58473455 - AluJo SINE Alu -21 291 1 891 144 0 0 chr17 26965612 26965737 -58472743 - FLAM_C SINE Alu -18 125 1 9039 44 60 106 chr17 26967876 26969270 -58469210 - SVA Other Other -9 1377 48 198 0 0 0 chr17 26969278 26969300 -58469180 + (GGGAGA)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr17 26969495 26969520 -58468960 + AT_rich Low_complexity Low_complexity 1 25 0 2144 133 0 13 chr17 26970677 26970992 -58467488 + AluJb SINE Alu 1 311 -1 25 65 0 0 chr17 26972614 26972660 -58465820 + AT_rich Low_complexity Low_complexity 1 46 0 1747 161 26 19 chr17 26972803 26973113 -58465367 + AluJb SINE Alu 1 312 0 1664 150 3 48 chr17 26973220 26973513 -58464967 - AluJo SINE Alu -32 280 1 22 35 0 0 chr17 26973697 26973726 -58464754 + AT_rich Low_complexity Low_complexity 1 29 0 367 178 33 56 chr17 26974402 26974492 -58463988 + Tigger4(Zombi) DNA MER2_type 2644 2731 0 2115 113 3 7 chr17 26975145 26975445 -58463035 + AluSx SINE Alu 1 299 -13 2612 49 0 0 chr17 26975665 26975971 -58462509 - AluY SINE Alu -5 306 1 304 299 81 17 chr17 26976486 26976660 -58461820 + HAL1 LINE L1 258 442 -2065 231 212 29 109 chr17 26976657 26976794 -58461686 + HAL1 LINE L1 674 799 -1708 * 996 156 0 75 chr17 26976812 26976998 -58461482 + AluJb SINE Alu 95 266 -46 1388 264 211 32 chr17 26977024 26977937 -58460543 + HAL1 LINE L1 808 1884 -623 1218 221 39 7 chr17 26978211 26978491 -58459989 - AluJo SINE Alu -23 289 1 226 231 77 0 chr17 26979601 26979666 -58458814 + L1MC4 LINE L1 6994 7063 -979 393 183 32 21 chr17 26979680 26979821 -58458659 + L1MC4 LINE L1 7821 8042 0 187 333 46 52 chr17 26979896 26980070 -58458410 - MIR SINE MIR -70 192 20 452 260 87 109 chr17 26980084 26980329 -58458151 + MIR SINE MIR 3 243 -19 2142 117 0 3 chr17 26980329 26980627 -58457853 + AluSq SINE Alu 1 297 -16 452 260 87 109 chr17 26980627 26980646 -58457834 + MIR SINE MIR 243 261 -1 1978 159 0 0 chr17 26981432 26981728 -58456752 - AluSx SINE Alu -16 296 1 2030 130 0 10 chr17 26981786 26982078 -58456402 + AluSx SINE Alu 1 289 -23 975 107 0 8 chr17 26982751 26982882 -58455598 + AluSg SINE Alu 1 130 -180 2263 85 3 3 chr17 26982885 26983179 -58455301 + AluSg SINE Alu 1 294 -16 581 245 153 10 chr17 26983243 26983439 -58455041 + MIR SINE MIR 37 260 -2 348 281 41 41 chr17 26983966 26984112 -58454368 - MIR SINE MIR 0 262 117 12345 125 39 23 chr17 26984114 26984416 -58454064 - Tigger1 DNA MER2_type -390 2028 1732 2134 125 0 26 chr17 26984416 26984727 -58453753 - AluSx SINE Alu -9 303 1 12345 125 39 23 chr17 26984727 26986130 -58452350 - Tigger1 DNA MER2_type -686 1732 285 1763 172 3 13 chr17 26986130 26986432 -58452048 + AluJb SINE Alu 1 299 -13 12345 125 39 23 chr17 26986432 26986722 -58451758 - Tigger1 DNA MER2_type -2133 285 1 821 173 20 7 chr17 26986747 26986897 -58451583 - FRAM SINE Alu -15 161 10 377 158 0 24 chr17 26986897 26986979 -58451501 + L1MD1 LINE L1 6163 6242 0 2338 97 0 0 chr17 26987833 26988133 -58450347 + AluSx SINE Alu 1 300 -12 278 213 40 0 chr17 26989040 26989115 -58449365 + (TAAA)n Simple_repeat Simple_repeat 3 80 0 268 242 137 0 chr17 26989371 26989466 -58449014 - L1ME4a LINE L1 -43 6078 5971 4984 161 82 26 chr17 26989654 26990366 -58448114 - L1MC2 LINE L1 0 6344 5673 2385 97 0 0 chr17 26990366 26990675 -58447805 + AluSg1 SINE Alu 1 309 0 4984 161 82 26 chr17 26990675 26990980 -58447500 - L1MC2 LINE L1 -671 5673 5277 2780 7 0 0 chr17 26990980 26991278 -58447202 + AluYa5 SINE Alu 1 298 -13 4984 161 82 26 chr17 26991278 26991309 -58447171 - L1MC2 LINE L1 -1067 5277 5249 3243 209 51 79 chr17 26991304 26992519 -58445961 + L1ME1 LINE L1 4515 5658 -508 * 2448 81 0 0 chr17 26992519 26992817 -58445663 + AluY SINE Alu 1 298 -13 3243 209 51 79 chr17 26992817 26993308 -58445172 + L1ME1 LINE L1 5658 6161 -5 387 292 22 143 chr17 26993577 26993899 -58444581 + L2 LINE L2 2981 3263 -9 2065 134 3 0 chr17 26994085 26994383 -58444097 - AluSx SINE Alu -13 299 1 354 277 114 36 chr17 26994573 26994793 -58443687 - MIR SINE MIR -23 239 3 704 202 0 0 chr17 26994905 26995024 -58443456 - FLAM_A SINE Alu -4 138 20 382 256 78 0 chr17 26995547 26995637 -58442843 + MER117 DNA MER1_type 4 100 -97 291 299 135 29 chr17 26995639 26995913 -58442567 - L2 LINE L2 -1221 2093 1791 313 333 130 36 chr17 26996098 26996483 -58441997 - L2 LINE L2 -1907 1407 987 1740 80 0 0 chr17 26996952 26997165 -58441315 - AluSg/x SINE Alu -10 300 88 1949 164 0 0 chr17 26997254 26997553 -58440927 + AluSx SINE Alu 3 301 -11 207 0 0 0 chr17 26997944 26997967 -58440513 + (TG)n Simple_repeat Simple_repeat 2 24 0 535 276 130 25 chr17 26998143 26998466 -58440014 + L1ME4a LINE L1 5571 5927 -194 2105 99 3 23 chr17 26998863 26999167 -58439313 + AluSc SINE Alu 1 298 -11 488 314 29 15 chr17 26999868 27000072 -58438408 - Tigger8 DNA MER2_type -214 452 246 500 192 0 0 chr17 27000072 27000150 -58438330 - AluSg/x SINE Alu -17 292 215 265 302 127 42 chr17 27000218 27000407 -58438073 + MIR SINE MIR 2 206 -56 2207 123 0 0 chr17 27000481 27000783 -58437697 - AluSx SINE Alu -10 302 1 376 254 146 16 chr17 27001183 27001368 -58437112 + Tigger8 DNA MER2_type 313 521 -145 498 235 80 98 chr17 27002620 27002761 -58435719 - L1MC4a LINE L1 -14 6107 5965 1939 152 3 3 chr17 27002761 27003058 -58435422 - AluSx SINE Alu -15 297 1 498 235 80 98 chr17 27003058 27003322 -58435158 - L1MC4a LINE L1 -156 5965 5708 2129 122 3 16 chr17 27003322 27003626 -58434854 + AluSx SINE Alu 1 300 -12 498 235 80 98 chr17 27003626 27003658 -58434822 - L1MC4a LINE L1 -413 5708 5677 2480 67 0 0 chr17 27003696 27003995 -58434485 + AluY SINE Alu 1 299 -12 2211 111 0 26 chr17 27004086 27004392 -58434088 + AluSg SINE Alu 1 298 -12 535 265 134 33 chr17 27004395 27004731 -58433749 - L1MC4a LINE L1 -2185 5623 5254 405 287 106 74 chr17 27004837 27005625 -58432855 - L1MC4a LINE L1 -1145 5001 4240 2056 104 17 23 chr17 27005625 27005924 -58432556 - AluSq SINE Alu -15 298 2 405 287 106 74 chr17 27005924 27006119 -58432361 - L1MC4a LINE L1 -1906 4240 3980 2312 96 7 0 chr17 27006119 27006420 -58432060 - AluSq SINE Alu -10 303 1 405 287 106 74 chr17 27006420 27006480 -58432000 - L1MC4a LINE L1 -2166 3980 3923 588 223 9 9 chr17 27006497 27006609 -58431871 + AluJo/FLAM SINE Alu 2 113 -199 266 149 0 21 chr17 27006609 27006656 -58431824 + AluJo/FLAM SINE Alu 67 112 -190 1345 180 9 9 chr17 27006656 27006889 -58431591 + AluJb SINE Alu 66 298 -14 270 0 0 0 chr17 27007594 27007624 -58430856 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 538 233 8 31 chr17 27008695 27008824 -58429656 + L2 LINE L2 3188 3313 0 183 80 0 0 chr17 27009015 27009040 -58429440 + (A)n Simple_repeat Simple_repeat 1 25 0 227 246 98 0 chr17 27009517 27009578 -58428902 + MIR SINE MIR 1 67 -195 21 0 0 0 chr17 27010160 27010181 -58428299 + AT_rich Low_complexity Low_complexity 1 21 0 875 145 0 0 chr17 27010181 27010312 -58428168 - AluJb SINE Alu -181 131 1 2291 103 3 0 chr17 27011148 27011448 -58427032 + AluSp SINE Alu 1 301 -12 2273 112 0 10 chr17 27011829 27012133 -58426347 - AluSx SINE Alu -9 303 3 685 176 76 0 chr17 27012194 27012325 -58426155 - FLAM_C SINE Alu -2 141 1 2338 75 0 33 chr17 27012352 27012658 -58425822 + AluY SINE Alu 1 296 -15 353 282 203 10 chr17 27012996 27013198 -58425282 + MIR SINE MIR 7 247 -15 2197 71 17 17 chr17 27013305 27013602 -58424878 + AluSc SINE Alu 1 297 -12 5816 200 210 24 chr17 27015336 27017289 -58421191 - L1MDa LINE L1 -4203 2337 21 1963 155 7 0 chr17 27017323 27017614 -58420866 + AluJo SINE Alu 1 293 -19 2251 102 7 3 chr17 27017667 27017971 -58420509 - AluSg SINE Alu -5 305 1 2463 81 3 7 chr17 27017971 27018279 -58420201 - AluSp SINE Alu -5 308 1 22 0 0 0 chr17 27018883 27018905 -58419575 + AT_rich Low_complexity Low_complexity 1 22 0 227 247 0 71 chr17 27019862 27019947 -58418533 - HAL1 LINE L1 -914 1593 1515 308 256 159 34 chr17 27020031 27020382 -58418098 - L1MEd LINE L1 -4867 1252 858 273 93 0 0 chr17 27020749 27020792 -58417688 + L1MD3 LINE L1 7928 7970 -25 24 32 0 0 chr17 27020940 27020971 -58417509 + AT_rich Low_complexity Low_complexity 1 31 0 2475 79 0 0 chr17 27021484 27021788 -58416692 + AluSx SINE Alu 1 304 -8 429 167 0 0 chr17 27021788 27021866 -58416614 + (TA)n Simple_repeat Simple_repeat 1 78 0 246 315 0 0 chr17 27021877 27021966 -58416514 + L1MC4 LINE L1 6614 6702 -1340 554 303 81 14 chr17 27022670 27022881 -58415599 - MIR SINE MIR -35 227 3 300 195 17 102 chr17 27027703 27027821 -58410659 - L1ME4a LINE L1 -5 6116 6009 1228 144 21 10 chr17 27027857 27028051 -58410429 - AluJb SINE Alu -116 196 1 327 282 36 9 chr17 27028051 27028161 -58410319 - L1ME4a LINE L1 -144 5977 5865 293 233 81 47 chr17 27028266 27028352 -58410128 - MIR SINE MIR -168 94 6 928 231 153 31 chr17 27028726 27028997 -58409483 - L2 LINE L2 0 3313 2996 3697 102 4 4 chr17 27028997 27029508 -58408972 + MER9 LTR ERVK 1 511 0 928 231 153 31 chr17 27029508 27029557 -58408923 - L2 LINE L2 -317 2996 2954 26 0 0 0 chr17 27030734 27030760 -58407720 + AT_rich Low_complexity Low_complexity 1 26 0 276 282 51 51 chr17 27031164 27031281 -58407199 + L2 LINE L2 3156 3272 0 563 286 124 53 chr17 27031467 27031879 -58406601 + L2 LINE L2 2341 2781 -533 1214 192 58 151 chr17 27032359 27032623 -58405857 + L1MB4 LINE L1 4479 4766 -1380 2432 46 23 0 chr17 27032623 27032929 -58405551 + L1PA4 LINE L1 5841 6153 -2 1214 192 58 151 chr17 27032929 27033271 -58405209 + L1MB4 LINE L1 4766 5026 -1120 1970 148 7 3 chr17 27033271 27033575 -58404905 - AluSx SINE Alu -7 305 1 1214 192 58 151 chr17 27033575 27033602 -58404878 + L1MB4 LINE L1 5026 5054 -1092 662 248 13 34 chr17 27033689 27033923 -58404557 + L1MB4 LINE L1 5040 5268 -878 2285 97 3 16 chr17 27033941 27034252 -58404228 - AluSq SINE Alu -6 307 1 1010 211 0 37 chr17 27034276 27034494 -58403986 + AluJb SINE Alu 85 294 -18 2835 143 53 60 chr17 27034500 27035156 -58403324 + L1MB4 LINE L1 5491 6142 -38 2141 129 6 16 chr17 27035287 27035598 -58402882 - AluSx SINE Alu -4 308 1 183 129 0 0 chr17 27035757 27035788 -58402692 + (CAA)n Simple_repeat Simple_repeat 3 33 0 274 320 165 0 chr17 27036366 27036463 -58402017 + L2 LINE L2 3159 3271 -1 2605 104 3 0 chr17 27037142 27037496 -58400984 + THE1A LTR MaLR 1 355 0 11859 88 7 1 chr17 27037496 27039066 -58399414 + THE1A-int LTR MaLR 1 1580 0 2351 114 20 6 chr17 27039066 27039416 -58399064 + THE1A LTR MaLR 1 355 0 380 229 30 70 chr17 27039451 27039589 -58398891 + L1MC4a LINE L1 5691 5820 -1988 2064 128 27 0 chr17 27039589 27039886 -58398594 + AluSx SINE Alu 1 305 -7 380 229 30 70 chr17 27039886 27039948 -58398532 + L1MC4a LINE L1 5820 5883 -1925 21 0 0 0 chr17 27040578 27040599 -58397881 + AT_rich Low_complexity Low_complexity 1 21 0 537 249 61 12 chr17 27040680 27040845 -58397635 + MER58A DNA MER1_type 1 173 -51 491 261 235 18 chr17 27040949 27041160 -58397320 + MIR SINE MIR 14 262 0 1604 205 17 0 chr17 27041282 27041579 -58396901 - AluJb SINE Alu -6 306 5 2109 136 0 10 chr17 27041800 27042110 -58396370 + AluSx SINE Alu 1 307 -5 221 0 0 33 chr17 27043006 27043036 -58395444 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1602 178 7 27 chr17 27043045 27043338 -58395142 - AluJo SINE Alu -25 287 1 563 238 188 50 chr17 27043338 27043700 -58394780 + MER113 DNA MER1_type? 105 516 -5 824 220 13 0 chr17 27043784 27043943 -58394537 - FRAM SINE Alu -5 161 1 7475 32 5 0 chr17 27044790 27045982 -58392498 + L1PA4 LINE L1 4960 6155 0 22 35 0 0 chr17 27046610 27046639 -58391841 + AT_rich Low_complexity Low_complexity 1 29 0 2297 99 0 16 chr17 27046674 27046977 -58391503 - AluSx SINE Alu -14 298 1 1360 137 5 0 chr17 27047439 27047643 -58390837 + AluSg/x SINE Alu 102 306 -4 681 260 71 57 chr17 27048620 27049128 -58389352 + L1MC4 LINE L1 7527 8041 -1 16607 24 0 0 chr17 27050034 27052751 -58385729 + L1PA2 LINE L1 3438 6154 -1 25 75 0 0 chr17 27052938 27052991 -58385489 + AT_rich Low_complexity Low_complexity 1 53 0 264 206 163 21 chr17 27053232 27053373 -58385107 + L1MC4a LINE L1 5973 6133 -1675 1545 200 0 24 chr17 27054032 27054327 -58384153 + AluJo SINE Alu 17 304 -8 1732 181 3 7 chr17 27054448 27054757 -58383723 - AluJb SINE Alu -4 308 1 4616 141 22 32 chr17 27054851 27055830 -58382650 - L1MB8 LINE L1 -11 6167 5200 948 178 0 6 chr17 27055831 27055994 -58382486 - FRAM SINE Alu -15 161 1 1944 194 42 32 chr17 27055994 27056029 -58382451 - L1MB8 LINE L1 -933 5213 5180 2203 167 61 7 chr17 27056029 27056472 -58382008 + MLT1C LTR MaLR 1 467 0 1944 194 42 32 chr17 27056472 27056940 -58381540 - L1MB8 LINE L1 -966 5180 4705 1594 179 3 42 chr17 27059228 27059535 -58378945 - AluJo SINE Alu -17 295 1 300 179 0 0 chr17 27059584 27059640 -58378840 - L1ME4a LINE L1 -5 6116 6061 332 261 11 11 chr17 27059701 27059793 -58378687 - MER58A DNA MER1_type -6 218 127 526 260 8 0 chr17 27059857 27059984 -58378496 - MER58A DNA MER1_type 0 129 2 21 71 0 0 chr17 27060221 27060263 -58378217 + AT_rich Low_complexity Low_complexity 1 42 0 4291 159 20 44 chr17 27060656 27061203 -58377277 + L1MB5 LINE L1 5101 5615 -559 1834 162 3 17 chr17 27061203 27061493 -58376987 + AluJo SINE Alu 1 286 -26 4291 159 20 44 chr17 27061493 27061988 -58376492 + L1MB5 LINE L1 5615 6120 -54 1000 210 81 108 chr17 27062104 27062632 -58375848 + MER34 LTR ERV1 3 516 -26 22 56 0 0 chr17 27062945 27062981 -58375499 + AT_rich Low_complexity Low_complexity 1 36 0 1969 142 51 79 chr17 27063271 27063778 -58374702 - L1MB8 LINE L1 0 6178 5686 316 204 19 31 chr17 27064252 27064414 -58374066 + GA-rich Low_complexity Low_complexity 2 161 0 2888 167 58 71 chr17 27064905 27064963 -58373517 + LTR8A LTR ERV1 1 58 -669 2284 104 0 3 chr17 27064963 27065261 -58373219 - AluSx SINE Alu -15 297 1 2888 167 58 71 chr17 27065261 27065932 -58372548 + LTR8A LTR ERV1 58 720 -7 2386 83 0 3 chr17 27065940 27066241 -58372239 - AluSg SINE Alu -10 300 1 2195 132 0 3 chr17 27066483 27066787 -58371693 - AluSx SINE Alu -9 303 1 2073 103 6 40 chr17 27067616 27067965 -58370515 + MER4B LTR ERV1 1 337 -273 1348 108 24 14 chr17 27067965 27068178 -58370302 + MER4E LTR ERV1 552 766 0 22 0 0 0 chr17 27068863 27068885 -58369595 + AT_rich Low_complexity Low_complexity 1 22 0 681 239 32 0 chr17 27071595 27071750 -58366730 - MIR SINE MIR 0 262 103 199 273 218 18 chr17 27072386 27072496 -58365984 + MIR3 SINE MIR 67 198 -10 2130 127 0 3 chr17 27072519 27072819 -58365661 + AluSx SINE Alu 1 299 -13 656 153 0 0 chr17 27073494 27073612 -58364868 + L1MB3 LINE L1 6066 6183 0 331 135 0 0 chr17 27073619 27073671 -58364809 + AluJo SINE Alu 1 52 -250 342 130 0 0 chr17 27073672 27073718 -58364762 + L2 LINE L2 3250 3295 -18 1628 169 19 8 chr17 27073718 27073979 -58364501 + AluJo SINE Alu 38 301 -11 464 324 132 53 chr17 27074037 27074759 -58363721 - L2 LINE L2 -213 3059 2258 885 268 75 99 chr17 27074806 27075043 -58363437 - L2 LINE L2 -5 3308 3067 2418 64 0 3 chr17 27075043 27075339 -58363141 - AluSc SINE Alu -14 295 1 885 268 75 99 chr17 27075339 27075693 -58362787 - L2 LINE L2 -246 3067 2735 2534 150 16 23 chr17 27075696 27075814 -58362666 - L1MB2 LINE L1 0 6171 6054 2303 68 14 10 chr17 27075814 27076109 -58362371 - AluSp SINE Alu -17 296 1 2534 150 16 23 chr17 27076109 27076477 -58362003 - L1MB2 LINE L1 -117 6054 5688 874 137 11 40 chr17 27076477 27076727 -58361753 - L1MB2 LINE L1 -743 5403 5188 515 249 319 18 chr17 27076796 27077069 -58361411 - L2 LINE L2 -565 2749 2395 2901 219 75 68 chr17 27077093 27077563 -58360917 + L2 LINE L2 2127 2592 -721 2313 76 7 26 chr17 27077563 27077866 -58360614 - AluY SINE Alu -14 297 1 2901 219 75 68 chr17 27077866 27078586 -58359894 + L2 LINE L2 2592 3312 -1 291 309 10 31 chr17 27078583 27078680 -58359800 - L2 LINE L2 -927 2387 2293 * 35633 86 6 16 chr17 27079138 27085345 -58353135 + L1PA6 LINE L1 11 6154 0 408 302 134 65 chr17 27086061 27086611 -58351869 + L1ME LINE L1 4312 4899 -1247 2822 77 40 19 chr17 27086708 27087137 -58351343 + MER4C LTR ERV1 28 465 0 343 268 179 12 chr17 27087534 27087702 -58350778 + L1ME LINE L1 5623 5818 -303 2046 219 81 20 chr17 27087916 27088631 -58349849 - L1ME1 LINE L1 0 6184 5382 409 257 18 9 chr17 27088895 27089004 -58349476 + L1MDb LINE L1 775 884 -5525 2303 112 3 0 chr17 27089030 27089335 -58349145 - AluSp SINE Alu -7 306 1 1251 257 65 44 chr17 27089357 27089565 -58348915 + L1MDb LINE L1 873 1075 -5331 2209 138 0 0 chr17 27089565 27089876 -58348604 - AluSx SINE Alu -1 311 1 1251 257 65 44 chr17 27089876 27090371 -58348109 + L1MDb LINE L1 1075 1591 -4815 1803 165 0 7 chr17 27090374 27090659 -58347821 + AluJb SINE Alu 1 283 -29 1074 140 0 0 chr17 27090674 27090853 -58347627 + (GAA)n Simple_repeat Simple_repeat 1 179 0 410 138 0 11 chr17 27090861 27090948 -58347532 + (GGAGAA)n Simple_repeat Simple_repeat 6 91 0 1367 218 75 66 chr17 27090967 27091183 -58347297 + L1MDb LINE L1 1592 1804 -4602 2317 77 3 61 chr17 27091183 27091510 -58346970 + AluY SINE Alu 1 308 -3 1367 218 75 66 chr17 27091510 27091916 -58346564 + L1MDb LINE L1 1804 2220 -4186 2026 227 42 36 chr17 27091936 27092135 -58346345 + L1MDb LINE L1 2300 2496 -3910 2129 108 3 7 chr17 27092135 27092452 -58346028 - AluSx SINE Alu 0 316 1 2026 227 42 36 chr17 27092452 27093035 -58345445 + L1MDb LINE L1 2496 3097 -3309 26 0 0 0 chr17 27093281 27093307 -58345173 + AT_rich Low_complexity Low_complexity 1 26 0 216 184 0 0 chr17 27093307 27093356 -58345124 + T-rich Low_complexity Low_complexity 3 51 0 399 43 58 14 chr17 27093886 27093955 -58344525 + (CTATT)n Simple_repeat Simple_repeat 2 73 0 398 221 79 14 chr17 27093984 27094124 -58344356 - Charlie2 DNA MER1_type 0 2862 2714 898 140 0 7 chr17 27094124 27094260 -58344220 - FLAM_C SINE Alu -3 140 6 1007 226 71 38 chr17 27094271 27094394 -58344086 - Charlie2 DNA MER1_type -157 2705 2588 1830 165 6 22 chr17 27094394 27094709 -58343771 - AluJb SINE Alu -2 310 1 1007 226 71 38 chr17 27094709 27095037 -58343443 - Charlie2 DNA MER1_type -274 2588 2239 706 204 158 21 chr17 27095054 27095294 -58343186 - Charlie2 DNA MER1_type -2421 361 89 293 111 37 0 chr17 27095312 27095366 -58343114 + GA-rich Low_complexity Low_complexity 4 59 0 189 0 0 0 chr17 27096942 27096963 -58341517 + (A)n Simple_repeat Simple_repeat 1 21 0 276 30 0 0 chr17 27097233 27097266 -58341214 + (CA)n Simple_repeat Simple_repeat 2 34 0 252 0 0 0 chr17 27098014 27098042 -58340438 + (A)n Simple_repeat Simple_repeat 1 28 0 1531 148 23 31 chr17 27098042 27098299 -58340181 - AluJo SINE Alu -55 257 3 243 238 0 113 chr17 27098474 27098642 -58339838 - L1M4 LINE L1 -3486 2660 2512 418 204 120 56 chr17 27099494 27099710 -58338770 - MER112 DNA MER1_type -2 258 29 2311 103 0 0 chr17 27099850 27100151 -58338329 + AluSx SINE Alu 1 301 -11 326 312 40 24 chr17 27100200 27100325 -58338155 - L2 LINE L2 0 3313 3187 514 259 50 96 chr17 27100339 27100578 -58337902 - MIR SINE MIR -33 229 2 589 186 81 0 chr17 27100734 27100858 -58337622 - FLAM_A SINE Alu -1 141 8 189 0 0 0 chr17 27101006 27101027 -58337453 + (A)n Simple_repeat Simple_repeat 1 21 0 2208 125 0 0 chr17 27101030 27101326 -58337154 + AluSp SINE Alu 1 296 -17 385 280 9 37 chr17 27101582 27101689 -58336791 + L2 LINE L2 3169 3272 0 325 267 99 10 chr17 27101693 27101794 -58336686 + MIR3 SINE MIR 92 201 -7 1989 139 14 3 chr17 27101844 27102139 -58336341 + AluSx SINE Alu 1 298 -14 3018 186 65 28 chr17 27103502 27104366 -58334114 + MER52A LTR ERV1 348 1277 -1 2051 127 7 3 chr17 27104744 27105047 -58333433 + AluSq SINE Alu 2 305 0 3065 153 39 50 chr17 27105075 27105749 -58332731 + L1MB4 LINE L1 5514 6179 -1 1762 190 3 7 chr17 27105831 27106120 -58332360 + AluJo SINE Alu 1 288 -24 353 309 132 36 chr17 27106131 27106351 -58332129 + L1MC4 LINE L1 7323 7563 -479 533 302 24 60 chr17 27106354 27106619 -58331861 + L1MC4 LINE L1 7638 7884 -158 258 56 0 0 chr17 27106619 27106655 -58331825 + (TG)n Simple_repeat Simple_repeat 1 36 0 533 302 24 60 chr17 27106655 27106809 -58331671 + L1MC4 LINE L1 7884 8042 0 235 170 57 0 chr17 27107559 27107612 -58330868 - FLAM SINE Alu -8 125 70 * 338 146 0 0 chr17 27107593 27107641 -58330839 - Alu SINE Alu -252 48 1 278 119 0 0 chr17 27107651 27107693 -58330787 + MER116 DNA Mariner 38 79 -1 466 284 38 91 chr17 27108658 27108922 -58329558 + MIR SINE MIR 7 256 -6 193 309 59 0 chr17 27109196 27109264 -58329216 - L2 LINE L2 0 3313 3242 221 262 134 39 chr17 27111878 27112069 -58326411 + MIR SINE MIR 30 241 -21 260 258 30 0 chr17 27112096 27112162 -58326318 + MIR3 SINE MIR 129 196 -12 21 57 0 0 chr17 27112934 27112969 -58325511 + GC_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 27113226 27113248 -58325232 + GC_rich Low_complexity Low_complexity 1 22 0 221 220 136 0 chr17 27114366 27114425 -58324055 - L2 LINE L2 -1 3312 3246 367 319 169 10 chr17 27114740 27115047 -58323433 - L2 LINE L2 -610 2704 2349 613 133 0 78 chr17 27115743 27115871 -58322609 - L1MA4 LINE L1 0 6300 6183 248 211 53 0 chr17 27115873 27115930 -58322550 + L1MA4 LINE L1 6130 6189 -111 731 229 120 0 chr17 27116256 27116448 -58322032 - MIR SINE MIR -30 232 18 1083 49 0 0 chr17 27116552 27116675 -58321805 + AluSq/x SINE Alu 10 132 -181 27 29 0 0 chr17 27116675 27116709 -58321771 + AT_rich Low_complexity Low_complexity 1 34 0 206 271 16 16 chr17 27116757 27116833 -58321647 + MIR SINE MIR 41 116 -92 206 321 12 0 chr17 27116831 27116912 -58321568 + MIR SINE MIR 178 259 -3 1989 141 0 21 chr17 27117591 27117768 -58320712 - AluJb SINE Alu -27 285 115 3802 114 52 22 chr17 27117768 27118364 -58320116 + LTR18B LTR ERVL 1 614 0 1989 141 0 21 chr17 27118364 27118477 -58320003 - AluJb SINE Alu -197 115 1 1803 196 21 21 chr17 27118477 27118900 -58319580 - L2 LINE L2 -1607 1707 1285 2180 118 7 7 chr17 27119715 27120021 -58318459 + AluSq SINE Alu 1 306 -7 1963 151 10 6 chr17 27120201 27120512 -58317968 - AluSx SINE Alu 0 312 1 23 78 0 0 chr17 27120642 27120693 -58317787 + AT_rich Low_complexity Low_complexity 1 51 0 1015 244 114 52 chr17 27120757 27121179 -58317301 + LTR16A1 LTR ERVL 10 457 0 1654 167 3 39 chr17 27121320 27121625 -58316855 - AluJb SINE Alu -18 294 1 991 288 53 55 chr17 27121951 27122447 -58316033 - MLT1K LTR MaLR -16 572 63 686 272 102 92 chr17 27122730 27123260 -58315220 + LTR67 LTR ERVL 4 538 -19 241 217 29 29 chr17 27123287 27123356 -58315124 - MIR SINE MIR -111 151 83 2192 124 20 0 chr17 27123884 27124190 -58314290 - AluSx SINE Alu 0 312 1 816 154 0 0 chr17 27124240 27124357 -58314123 + FLAM_C SINE Alu 1 117 -26 27 29 0 0 chr17 27124366 27124400 -58314080 + AT_rich Low_complexity Low_complexity 1 34 0 988 147 28 6 chr17 27124407 27124523 -58313957 + L1MB5 LINE L1 5994 6117 -57 1462 150 4 4 chr17 27124523 27124750 -58313730 - AluJb SINE Alu -85 227 1 988 147 28 6 chr17 27124750 27124810 -58313670 + L1MB5 LINE L1 6117 6174 0 2123 118 3 7 chr17 27126003 27126300 -58312180 + AluSx SINE Alu 2 297 -15 189 0 0 0 chr17 27126302 27126323 -58312157 + (GA)n Simple_repeat Simple_repeat 1 21 0 412 133 0 0 chr17 27126810 27126870 -58311610 + AluS SINE Alu 1 60 -258 366 120 0 0 chr17 27126873 27126923 -58311557 - AluS SINE Alu -236 66 17 228 129 0 0 chr17 27126928 27126959 -58311521 - Alu SINE Alu -270 31 1 2432 97 0 3 chr17 27127027 27127338 -58311142 + AluSg SINE Alu 1 310 0 1531 172 19 22 chr17 27127341 27127443 -58311037 + AluJb SINE Alu 33 134 -178 306 0 0 0 chr17 27127443 27127477 -58311003 + (TAAAA)n Simple_repeat Simple_repeat 3 36 0 1531 172 19 22 chr17 27127477 27127641 -58310839 + AluJb SINE Alu 134 298 -14 871 185 0 62 chr17 27128413 27128591 -58309889 - FRAM SINE Alu -9 167 1 2334 89 3 0 chr17 27128605 27128898 -58309582 - AluSc SINE Alu -15 294 1 1095 296 33 46 chr17 27129620 27129727 -58308753 - HAL1b LINE L1 -598 750 643 2307 111 3 3 chr17 27129727 27130034 -58308446 - AluSx SINE Alu -5 307 1 1095 296 33 46 chr17 27130034 27130421 -58308059 - HAL1b LINE L1 -705 643 263 2493 70 0 7 chr17 27130421 27130722 -58307758 - AluY SINE Alu -12 299 1 1095 296 33 46 chr17 27130722 27130858 -58307622 - HAL1b LINE L1 -1085 263 127 443 300 33 24 chr17 27131121 27131331 -58307149 - MIR SINE MIR 0 262 51 650 154 29 0 chr17 27131592 27131696 -58306784 - U6 snRNA snRNA 0 107 1 244 185 38 147 chr17 27132078 27132159 -58306321 - Charlie7 DNA MER1_type 0 2612 2524 216 0 0 0 chr17 27132159 27132183 -58306297 + (TATTG)n Simple_repeat Simple_repeat 2 25 0 1811 171 0 3 chr17 27132183 27132469 -58306011 - AluJb SINE Alu -27 285 1 244 185 38 147 chr17 27132469 27132543 -58305937 - Charlie7 DNA MER1_type -86 2526 2473 187 171 66 0 chr17 27132550 27132626 -58305854 + (TA)n Simple_repeat Simple_repeat 2 82 0 781 216 186 29 chr17 27132633 27133195 -58305285 - Charlie7 DNA MER1_type -65 2547 1861 1232 69 162 0 chr17 27133205 27133378 -58305102 - L1P LINE L1 -1752 4394 4194 385 193 29 107 chr17 27133378 27133446 -58305034 - Charlie7 DNA MER1_type -770 1842 1789 1498 137 7 121 chr17 27133446 27133752 -58304728 - AluJo SINE Alu -4 308 38 385 193 29 107 chr17 27133752 27133823 -58304657 - Charlie7 DNA MER1_type -823 1789 1714 749 229 17 42 chr17 27133861 27134101 -58304379 - Charlie7 DNA MER1_type -904 1708 1475 21 0 0 0 chr17 27134178 27134199 -58304281 + AT_rich Low_complexity Low_complexity 1 21 0 288 274 144 7 chr17 27134226 27134379 -58304101 - Charlie7 DNA MER1_type -2383 229 56 1983 92 11 26 chr17 27184459 27184732 -58253748 + AluSx SINE Alu 7 275 -37 22 0 0 0 chr17 27184735 27184757 -58253723 + AT_rich Low_complexity Low_complexity 1 22 0 2020 185 138 2 chr17 27184907 27185339 -58253141 + L1MC4 LINE L1 6520 6892 -1150 1776 141 36 0 chr17 27185339 27185616 -58252864 + AluJb SINE Alu 1 287 -25 192 77 0 0 chr17 27185616 27185642 -58252838 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2020 185 138 2 chr17 27185642 27185678 -58252802 + L1MC4 LINE L1 6891 7053 -989 1640 213 39 16 chr17 27185695 27186239 -58252241 + L1MC4 LINE L1 7165 7833 -95 1901 159 10 22 chr17 27186379 27186693 -58251787 + AluJb SINE Alu 3 312 0 1499 158 96 7 chr17 27187228 27187500 -58250980 + MER1B DNA MER1_type 44 339 0 303 314 10 20 chr17 27187710 27187812 -58250668 + MIR SINE MIR 33 133 -129 21 57 0 0 chr17 27188374 27188409 -58250071 + AT_rich Low_complexity Low_complexity 1 35 0 2360 108 0 0 chr17 27189057 27189362 -58249118 - AluSx SINE Alu -5 307 3 21 36 0 0 chr17 27189491 27189519 -58248961 + AT_rich Low_complexity Low_complexity 1 28 0 2171 121 7 3 chr17 27189622 27189920 -58248560 - AluSq SINE Alu -14 299 1 21 0 0 0 chr17 27190038 27190059 -58248421 + AT_rich Low_complexity Low_complexity 1 21 0 331 230 41 43 chr17 27191439 27191494 -58246986 - L1ME LINE L1 -555 5566 5512 1987 149 7 3 chr17 27191494 27191783 -58246697 + AluSx SINE Alu 2 291 -21 2469 78 0 0 chr17 27191786 27192095 -58246385 + AluY SINE Alu 1 309 -2 331 230 41 43 chr17 27192095 27192192 -58246288 - L1ME LINE L1 -611 5510 5419 383 254 40 0 chr17 27192209 27192335 -58246145 + L1ME LINE L1 4915 5045 -1101 719 138 83 14 chr17 27192336 27192481 -58245999 + MER3 DNA MER1_type 5 159 -50 322 263 136 8 chr17 27192484 27192602 -58245878 + L1ME LINE L1 5152 5284 -862 2297 74 3 0 chr17 27192605 27192913 -58245567 + AluSp SINE Alu 1 309 0 207 0 0 0 chr17 27192962 27192985 -58245495 + (A)n Simple_repeat Simple_repeat 1 23 0 1716 165 33 4 chr17 27192999 27193272 -58245208 + AluJb SINE Alu 11 291 -21 943 211 41 71 chr17 27193323 27193687 -58244793 + L1ME LINE L1 5406 5758 -412 267 281 10 10 chr17 27193936 27194032 -58244448 - MLT1K LTR MaLR 0 588 493 315 0 0 0 chr17 27194032 27194067 -58244413 + (A)n Simple_repeat Simple_repeat 1 35 0 392 296 86 13 chr17 27194260 27194412 -58244068 - MLT1K LTR MaLR -415 173 11 21 0 0 0 chr17 27195450 27195471 -58243009 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 25 chr17 27195659 27195682 -58242798 + AT_rich Low_complexity Low_complexity 1 24 -15 1601 211 18 0 chr17 27195682 27195966 -58242514 - AluJo SINE Alu -23 289 1 29 0 0 25 chr17 27195966 27195982 -58242498 + AT_rich Low_complexity Low_complexity 24 39 0 21 36 0 0 chr17 27196148 27196176 -58242304 + AT_rich Low_complexity Low_complexity 1 28 0 221 313 0 50 chr17 27196639 27196821 -58241659 + CT-rich Low_complexity Low_complexity 2 174 0 1998 154 27 0 chr17 27197736 27198034 -58240446 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 27198040 27198062 -58240418 + AT_rich Low_complexity Low_complexity 1 22 0 529 195 54 87 chr17 27198876 27198991 -58239489 + MER3 DNA MER1_type 31 148 -61 2354 100 0 0 chr17 27198991 27199302 -58239178 - AluY SINE Alu 0 311 1 2128 124 0 0 chr17 27199303 27199593 -58238887 - AluSc SINE Alu -19 290 1 529 195 54 87 chr17 27199593 27199660 -58238820 + MER3 DNA MER1_type 147 209 0 219 108 0 0 chr17 27199882 27199907 -58238573 + (A)n Simple_repeat Simple_repeat 1 28 -9 1351 128 50 157 chr17 27199907 27200042 -58238438 + AluJb SINE Alu 2 150 -152 2270 115 3 10 chr17 27200042 27200355 -58238125 + AluSx SINE Alu 1 311 -1 1351 128 50 157 chr17 27200355 27200556 -58237924 + AluJb SINE Alu 150 302 0 219 108 0 0 chr17 27200556 27200567 -58237913 + (A)n Simple_repeat Simple_repeat 27 37 0 837 199 65 16 chr17 27201151 27201337 -58237143 + MER58A DNA MER1_type 1 195 -29 248 26 154 0 chr17 27201382 27201421 -58237059 + MER58A DNA MER1_type 175 219 -5 2056 121 7 0 chr17 27201500 27201781 -58236699 + AluSx SINE Alu 5 287 -25 1994 139 14 0 chr17 27201815 27202103 -58236377 + AluJb SINE Alu 1 292 -20 25 51 0 0 chr17 27202893 27202932 -58235548 + AT_rich Low_complexity Low_complexity 1 39 0 692 275 106 18 chr17 27204018 27204236 -58234244 + MIR SINE MIR 26 262 0 1974 129 0 23 chr17 27204562 27204865 -58233615 - AluJb SINE Alu -15 297 2 1972 130 0 33 chr17 27205324 27205625 -58232855 - AluSg SINE Alu -19 291 1 282 191 22 22 chr17 27205719 27205808 -58232672 + L1M4 LINE L1 2474 2562 -3584 229 50 25 25 chr17 27205810 27205850 -58232630 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 1216 119 0 32 chr17 27205917 27206102 -58232378 - AluSg/x SINE Alu -9 303 125 755 247 68 27 chr17 27206103 27206242 -58232238 + L1M4 LINE L1 2678 2810 -3336 1478 149 114 21 chr17 27206242 27206563 -58231917 + AluSx SINE Alu 1 312 0 755 247 68 27 chr17 27206563 27206906 -58231574 + L1M4 LINE L1 2810 3171 -2975 266 290 0 11 chr17 27207145 27207238 -58231242 - L1M4 LINE L1 -2285 3861 3770 324 315 74 0 chr17 27207271 27207420 -58231060 + L1M4 LINE L1 3952 4111 -2035 344 280 21 21 chr17 27207830 27207923 -58230557 + MIR3 SINE MIR 82 174 -34 856 316 17 0 chr17 27208098 27208335 -58230145 + MIR SINE MIR 8 248 -14 193 333 105 19 chr17 27208508 27208613 -58229867 + MIR SINE MIR 38 151 -57 2051 122 0 0 chr17 27208683 27208979 -58229501 + AluSx SINE Alu 1 296 -16 1063 177 105 5 chr17 27209464 27209673 -58228807 - MER46A DNA MER2_type -6 230 1 255 259 0 129 chr17 27209886 27209935 -58228545 + MIR3 SINE MIR 100 154 -54 438 20 0 0 chr17 27209935 27209986 -58228494 + (GA)n Simple_repeat Simple_repeat 1 51 0 297 0 0 0 chr17 27209985 27210018 -58228462 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 255 259 0 129 chr17 27209986 27210084 -58228396 + MIR3 SINE MIR 154 200 -8 2077 119 0 3 chr17 27210346 27210648 -58227832 + AluSx SINE Alu 1 301 -11 3579 207 69 9 chr17 27210857 27211757 -58226723 + L1MA9 LINE L1 5353 6291 -21 310 132 118 40 chr17 27211762 27211838 -58226642 + L1MB7 LINE L1 6089 6170 -14 428 143 44 55 chr17 27211872 27211963 -58226517 + L1MC1 LINE L1 6235 6324 -9 22 35 0 0 chr17 27212172 27212201 -58226279 + AT_rich Low_complexity Low_complexity 1 29 0 234 203 89 51 chr17 27212278 27212357 -58226123 - MIR SINE MIR 0 262 181 433 286 64 41 chr17 27214489 27214660 -58223820 - MER91A DNA MER1_type 0 196 22 1033 146 0 12 chr17 27215588 27215753 -58222727 - FRAM SINE Alu -15 161 1 382 190 26 60 chr17 27216362 27216478 -58222002 - MER103 DNA DNA -19 147 36 1976 113 0 14 chr17 27216478 27216771 -58221709 - AluSx SINE Alu -23 289 1 235 204 0 19 chr17 27216771 27216825 -58221655 - MER103 DNA DNA -106 60 8 198 146 42 21 chr17 27216906 27216954 -58221526 - MIR SINE MIR -65 143 95 1684 143 57 4 chr17 27217512 27217791 -58220689 + AluJo SINE Alu 1 294 -18 1252 130 0 0 chr17 27217935 27218112 -58220368 - AluSx SINE Alu -135 177 1 22 0 0 0 chr17 27219903 27219925 -58218555 + AT_rich Low_complexity Low_complexity 1 22 0 800 197 68 44 chr17 27220662 27220968 -58217512 - MER96B DNA MER1_type? -27 390 20 189 0 0 0 chr17 27221021 27221042 -58217438 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 250 210 90 40 chr17 27221163 27221263 -58217217 + L1MEd LINE L1 2 106 -6013 248 0 31 0 chr17 27221602 27221634 -58216846 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1056 116 0 0 chr17 27221649 27221795 -58216685 - AluSq/x SINE Alu -167 146 1 189 132 0 0 chr17 27221921 27221959 -58216521 + (A)n Simple_repeat Simple_repeat 1 38 0 202 308 0 0 chr17 27222330 27222382 -58216098 + MIR SINE MIR 79 130 -78 348 292 42 35 chr17 27222387 27222398 -58216082 + MIR SINE MIR 108 117 -145 2205 74 50 7 chr17 27222398 27222696 -58215784 - AluSx SINE Alu -1 311 1 348 292 42 35 chr17 27222696 27222828 -58215652 + MIR SINE MIR 117 252 -10 769 227 23 32 chr17 27222863 27223079 -58215401 + L1ME3A LINE L1 5945 6158 -12 1616 121 121 11 chr17 27223082 27223347 -58215133 - AluSg SINE Alu -16 294 1 207 276 0 0 chr17 27223795 27223853 -58214627 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 216 0 0 0 chr17 27224268 27224292 -58214188 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2164 98 0 43 chr17 27224367 27224693 -58213787 - AluSx SINE Alu 0 312 1 1811 91 102 4 chr17 27225081 27225356 -58213124 + AluSx SINE Alu 1 302 -10 1345 161 14 0 chr17 27228093 27228304 -58210176 - AluJb SINE Alu -25 287 74 1755 102 0 0 chr17 27228986 27229231 -58209249 - AluSg/x SINE Alu -2 310 66 1854 155 0 0 chr17 27229428 27229736 -58208744 - AluJb SINE Alu 0 308 1 416 77 0 0 chr17 27229831 27229883 -58208597 + Alu SINE Alu 2 53 -257 239 102 0 0 chr17 27230008 27230057 -58208423 + Alu SINE Alu 255 303 0 2309 66 13 3 chr17 27230239 27230543 -58207937 - AluY SINE Alu 0 311 5 998 104 17 6 chr17 27230547 27230720 -58207760 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1617 130 91 0 chr17 27230720 27230974 -58207506 - AluSx SINE Alu -35 277 1 361 63 63 0 chr17 27231883 27231946 -58206534 + G-rich Low_complexity Low_complexity 2 68 0 1752 153 47 7 chr17 27232292 27232471 -58206009 - AluSq SINE Alu 0 313 116 210 37 0 0 chr17 27232471 27232498 -58205982 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1752 153 47 7 chr17 27232498 27232619 -58205861 - AluSq SINE Alu -197 116 1 292 353 81 0 chr17 27234767 27234903 -58203577 + MIR3 SINE MIR 6 152 -56 375 228 59 40 chr17 27234944 27235045 -58203435 + MER5A DNA MER1_type 65 167 -22 206 257 71 62 chr17 27234948 27235061 -58203419 - MER5A DNA MER1_type -57 132 19 * 186 261 130 0 chr17 27236064 27236133 -58202347 - L2 LINE L2 -56 3257 3180 2372 86 0 0 chr17 27236588 27236892 -58201588 - AluSx SINE Alu -7 305 2 379 176 0 93 chr17 27237002 27237195 -58201285 + (CAGCC)n Simple_repeat Simple_repeat 1 175 0 2065 111 10 0 chr17 27239837 27240134 -58198346 - AluSx SINE Alu -12 300 1 25 0 0 0 chr17 27240617 27240642 -58197838 + AT_rich Low_complexity Low_complexity 1 25 0 2136 121 0 0 chr17 27242034 27242347 -58196133 + AluSq SINE Alu 1 313 0 1051 139 52 0 chr17 27242347 27242519 -58195961 + AluSg/x SINE Alu 130 310 0 190 214 24 0 chr17 27242519 27242561 -58195919 - L2 LINE L2 -79 3193 3151 1896 148 0 6 chr17 27243065 27243080 -58195400 - AluJb SINE Alu -3 309 295 228 35 0 0 chr17 27243080 27243109 -58195371 + (TG)n Simple_repeat Simple_repeat 2 30 0 1896 148 0 6 chr17 27243109 27243404 -58195076 - AluJb SINE Alu -17 295 1 653 263 67 10 chr17 27243782 27243976 -58194504 + MIR SINE MIR 46 250 -12 323 270 57 21 chr17 27244126 27244253 -58194227 - MER5A DNA MER1_type -5 173 30 285 98 0 0 chr17 27245484 27245525 -58192955 + (TG)n Simple_repeat Simple_repeat 2 42 0 822 231 65 10 chr17 27245542 27245741 -58192739 + MER63A DNA MER1_type 1 210 0 1897 118 49 0 chr17 27245948 27246236 -58192244 + AluSx SINE Alu 1 302 -10 654 195 5 125 chr17 27246608 27246808 -58191672 - MER69A DNA AcHobo -1 176 1 355 289 125 0 chr17 27247401 27247529 -58190951 + MIR SINE MIR 113 256 -6 2173 84 0 7 chr17 27247534 27247848 -58190632 + AluSx SINE Alu 1 312 0 321 89 0 0 chr17 27248019 27248064 -58190416 + (CA)n Simple_repeat Simple_repeat 2 46 0 476 240 31 39 chr17 27248175 27248304 -58190176 + MIR3 SINE MIR 34 161 -47 650 155 5 136 chr17 27248310 27248523 -58189957 - MER53 DNA DNA -4 185 1 1695 164 14 0 chr17 27248640 27249094 -58189386 + AluSx SINE Alu 1 458 0 189 0 0 0 chr17 27249111 27249132 -58189348 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2135 98 24 0 chr17 27249172 27249469 -58189011 + AluSg1 SINE Alu 1 304 -5 185 370 37 12 chr17 27249854 27249935 -58188545 + MER5A DNA MER1_type 4 86 -103 1735 132 26 45 chr17 27250069 27250380 -58188100 - AluJb SINE Alu -7 305 1 557 227 31 16 chr17 27250839 27250967 -58187513 + MER91B DNA MER1_type 48 177 -13 298 265 73 0 chr17 27250975 27251043 -58187437 + L2 LINE L2 3237 3309 -4 655 276 57 11 chr17 27251073 27251337 -58187143 - L1MC4 LINE L1 -26 8016 7741 796 268 140 24 chr17 27251468 27251718 -58186762 + LTR16C LTR ERVL 125 423 -68 1970 131 0 13 chr17 27251718 27252024 -58186456 - AluSx SINE Alu -10 302 1 796 268 140 24 chr17 27252024 27252102 -58186378 + LTR16C LTR ERVL 423 491 0 725 266 85 11 chr17 27252295 27252483 -58185997 - MIR SINE MIR 0 262 61 837 213 107 40 chr17 27252666 27252919 -58185561 + AluSp SINE Alu 44 313 0 2169 97 3 40 chr17 27253986 27254307 -58184173 - AluSx SINE Alu -3 309 1 545 256 174 43 chr17 27254358 27254594 -58183886 + MIR SINE MIR 2 258 -4 2254 73 7 13 chr17 27255567 27255869 -58182611 + AluY SINE Alu 1 300 -11 326 162 68 60 chr17 27256064 27256181 -58182299 - L1ME4a LINE L1 -2 6119 6002 2174 91 7 7 chr17 27256244 27256541 -58181939 - AluSq SINE Alu -16 297 1 226 180 16 49 chr17 27257084 27257145 -58181335 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 522 203 20 81 chr17 27257274 27257359 -58181121 + MER5B DNA MER1_type 38 112 -66 1621 164 24 47 chr17 27257359 27257657 -58180823 - AluJo SINE Alu -21 291 1 522 203 20 81 chr17 27257657 27257719 -58180761 + MER5B DNA MER1_type 112 176 -2 386 252 26 33 chr17 27257734 27257885 -58180595 - L1ME4a LINE L1 -238 5883 5734 353 203 173 3 chr17 27258282 27258391 -58180089 - L1ME4a LINE L1 -536 5585 5458 2210 102 0 40 chr17 27258400 27258779 -58179701 - AluSx SINE Alu 0 366 1 327 279 29 15 chr17 27258857 27258993 -58179487 - L1P LINE L1 -797 5349 5212 1998 148 3 3 chr17 27259117 27259415 -58179065 + AluSx SINE Alu 1 298 -14 1100 159 0 70 chr17 27259674 27259908 -58178572 + AluJo SINE Alu 96 315 0 1494 142 0 0 chr17 27260023 27260235 -58178245 - AluJb SINE Alu -17 295 84 306 0 0 0 chr17 27260373 27260407 -58178073 + (TG)n Simple_repeat Simple_repeat 2 35 0 656 294 106 33 chr17 27260542 27260937 -58177543 + L1MC4a LINE L1 5461 5884 -280 232 157 84 60 chr17 27260998 27261081 -58177399 + L1ME4a LINE L1 5933 6017 -104 340 320 120 10 chr17 27261803 27262003 -58176477 - MIR SINE MIR -40 222 1 250 250 0 0 chr17 27262212 27262264 -58176216 + L2 LINE L2 3262 3313 0 205 261 0 62 chr17 27262652 27262717 -58175763 + L2 LINE L2 3210 3270 -2 1722 169 23 19 chr17 27264250 27264557 -58173923 - AluJo SINE Alu 0 312 5 2173 109 10 10 chr17 27264650 27264961 -58173519 + AluSq SINE Alu 1 311 -2 1786 174 3 0 chr17 27265322 27265609 -58172871 + AluJb SINE Alu 1 288 -24 531 245 63 63 chr17 27265808 27265951 -58172529 + L2 LINE L2 3123 3265 -7 885 198 10 78 chr17 27266120 27266155 -58172325 - FAM SINE Alu -142 43 7 878 168 0 0 chr17 27266155 27266286 -58172194 + FLAM_C SINE Alu 2 132 -1 2125 135 0 0 chr17 27266292 27266588 -58171892 + AluSx SINE Alu 1 296 -16 885 198 10 78 chr17 27266588 27266737 -58171743 - FAM SINE Alu -26 159 1 2083 129 0 3 chr17 27267114 27267408 -58171072 + AluSg SINE Alu 1 293 -17 483 258 36 93 chr17 27267957 27267996 -58170484 + MIR SINE MIR 51 91 -171 1914 121 0 76 chr17 27267996 27268326 -58170154 - AluSx SINE Alu -7 305 1 483 258 36 93 chr17 27268326 27268511 -58169969 + MIR SINE MIR 91 262 0 2075 142 7 0 chr17 27269365 27269668 -58168812 - AluJb SINE Alu -7 305 1 2131 129 0 3 chr17 27269676 27269979 -58168501 - AluSx SINE Alu -10 302 1 1902 138 34 0 chr17 27271188 27271479 -58167001 + AluSx SINE Alu 2 302 -10 350 231 218 48 chr17 27272465 27272612 -58165868 + MIR3 SINE MIR 30 201 -7 30 0 0 0 chr17 27273208 27273238 -58165242 + AT_rich Low_complexity Low_complexity 1 30 0 2000 127 7 0 chr17 27273242 27273525 -58164955 + AluSx SINE Alu 3 287 -25 2006 127 3 7 chr17 27273534 27273818 -58164662 + AluSq SINE Alu 1 283 -30 24 71 0 0 chr17 27273829 27273857 -58164623 + AT_rich Low_complexity Low_complexity 1 28 0 460 217 178 7 chr17 27274258 27274337 -58164143 - Charlie8 DNA MER1_type -65 265 201 2233 127 13 0 chr17 27274337 27274645 -58163835 - AluSx SINE Alu 0 312 1 460 217 178 7 chr17 27274645 27274717 -58163763 - Charlie8 DNA MER1_type -129 201 88 223 323 161 0 chr17 27274952 27275076 -58163404 - MIR SINE MIR -73 189 46 188 331 62 62 chr17 27275396 27275526 -58162954 - MIR SINE MIR -36 226 97 300 188 0 0 chr17 27275812 27275876 -58162604 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 317 265 24 0 chr17 27275896 27275979 -58162501 - L1MC4 LINE L1 -1350 6692 6608 480 267 22 30 chr17 27276169 27276304 -58162176 - MIR SINE MIR -56 206 73 715 264 78 30 chr17 27276567 27276798 -58161682 - MIR SINE MIR -19 243 2 1220 188 0 26 chr17 27276918 27276991 -58161489 + AluJo SINE Alu 66 139 -173 2156 113 0 0 chr17 27276991 27277301 -58161179 + AluSx SINE Alu 1 310 0 1220 188 0 26 chr17 27277301 27277455 -58161025 + AluJo SINE Alu 139 288 -24 229 336 126 28 chr17 27278100 27278243 -58160237 + MIR3 SINE MIR 43 199 -9 1302 160 13 4 chr17 27278272 27278497 -58159983 + AluJb SINE Alu 5 231 -81 1258 117 6 6 chr17 27278533 27278712 -58159768 + AluSg/x SINE Alu 122 300 -12 1902 132 21 7 chr17 27279025 27279312 -58159168 - AluSx SINE Alu -21 291 1 1924 127 6 41 chr17 27279711 27280025 -58158455 - AluJb SINE Alu -9 303 1 985 244 0 42 chr17 27280043 27280281 -58158199 + MIR SINE MIR 31 258 -4 214 148 66 49 chr17 27280282 27280343 -58158137 - MIR SINE MIR -101 161 100 567 43 0 0 chr17 27280521 27280591 -58157889 + (TTTC)n Simple_repeat Simple_repeat 1 70 0 2257 104 0 0 chr17 27280866 27281164 -58157316 + AluSx SINE Alu 1 298 -14 2378 79 3 10 chr17 27281770 27282073 -58156407 + AluY SINE Alu 1 301 -10 1986 84 30 4 chr17 27282084 27282346 -58156134 + AluSg SINE Alu 30 298 -12 314 306 61 50 chr17 27282346 27282526 -58155954 + L2 LINE L2 2931 3112 -160 275 278 30 95 chr17 27282564 27282623 -58155857 + L2 LINE L2 2521 2582 -732 2065 101 13 32 chr17 27282623 27282939 -58155541 - AluSx SINE Alu -2 310 1 275 278 30 95 chr17 27282939 27283048 -58155432 + L2 LINE L2 2582 2678 -636 1919 105 73 0 chr17 27283048 27283334 -58155146 - AluSx SINE Alu -5 307 1 2063 134 3 0 chr17 27283504 27283802 -58154678 + AluSg SINE Alu 6 304 -6 2430 97 0 0 chr17 27283937 27284246 -58154234 + AluSc SINE Alu 1 309 0 227 261 75 52 chr17 27284395 27284529 -58153951 - L1ME LINE L1 -377 5785 5649 929 187 53 21 chr17 27284530 27284717 -58153763 + MER3 DNA MER1_type 12 204 -5 462 320 8 0 chr17 27284727 27284855 -58153625 - L1ME LINE L1 -519 5651 5523 3754 138 30 8 chr17 27284918 27285257 -58153223 + MER41B LTR ERV1 2 361 -274 2205 77 0 67 chr17 27285257 27285570 -58152910 + AluSg SINE Alu 1 292 -18 3754 138 30 8 chr17 27285570 27285840 -58152640 + MER41B LTR ERV1 361 624 -11 425 160 34 17 chr17 27285885 27286004 -58152476 - L1ME LINE L1 -973 5386 5266 24 0 0 0 chr17 27286022 27286046 -58152434 + AT_rich Low_complexity Low_complexity 1 24 0 206 267 178 0 chr17 27286072 27286162 -58152318 + L2 LINE L2 2687 2792 -522 401 282 29 0 chr17 27286279 27286382 -58152098 + MLT1L LTR MaLR 163 268 -347 3753 129 45 72 chr17 27286450 27287184 -58151296 + LTR8A LTR ERV1 1 714 -13 604 281 132 17 chr17 27287229 27287524 -58150956 + L2 LINE L2 2966 3294 -19 888 150 0 0 chr17 27287524 27287657 -58150823 - AluSq/x SINE Alu -180 133 1 404 263 80 7 chr17 27287693 27287830 -58150650 + L2 LINE L2 3167 3313 0 288 289 24 12 chr17 27288437 27288520 -58149960 + L2 LINE L2 2886 2969 -303 1207 173 15 0 chr17 27289111 27289313 -58149167 - AluSq SINE Alu -4 309 105 3538 201 139 53 chr17 27289313 27290354 -58148126 - LTR28 LTR ERV1 0 1755 2 627 141 91 0 chr17 27290354 27290453 -58148027 - AluJb SINE Alu -203 109 2 345 270 31 68 chr17 27290466 27290540 -58147940 - Charlie8 DNA MER1_type -184 157 82 1674 161 39 4 chr17 27290540 27290819 -58147661 - AluJb SINE Alu -23 289 1 345 270 31 68 chr17 27290819 27290907 -58147573 - Charlie8 DNA MER1_type -259 82 1 2338 99 0 3 chr17 27291093 27291396 -58147084 + AluSq SINE Alu 1 302 -11 1200 145 0 141 chr17 27291599 27291868 -58146612 - AluJo SINE Alu -61 251 21 405 265 197 16 chr17 27292430 27292679 -58145801 + L2 LINE L2 1827 2120 -1194 680 251 25 69 chr17 27292687 27292737 -58145743 - MER91A DNA MER1_type 0 196 145 2300 99 3 0 chr17 27292737 27293031 -58145449 + AluSg SINE Alu 1 295 -15 680 251 25 69 chr17 27293031 27293183 -58145297 - MER91A DNA MER1_type -51 145 3 280 369 15 42 chr17 27293241 27293504 -58144976 + L2 LINE L2 2224 2479 -835 307 298 70 121 chr17 27293756 27294169 -58144311 + L2 LINE L2 2868 3259 -13 243 0 0 0 chr17 27295457 27295484 -58142996 + (CCG)n Simple_repeat Simple_repeat 1 27 0 260 176 44 29 chr17 27296886 27296954 -58141526 + L1ME1 LINE L1 6093 6161 -5 25 0 0 0 chr17 27298305 27298330 -58140150 + AT_rich Low_complexity Low_complexity 1 25 0 1936 148 10 7 chr17 27298450 27298754 -58139726 - AluSx SINE Alu -7 305 1 1877 128 43 0 chr17 27298800 27299081 -58139399 + AluJb SINE Alu 11 303 -9 596 217 9 0 chr17 27299258 27299364 -58139116 + U6 snRNA snRNA 1 107 0 231 147 0 0 chr17 27300012 27300046 -58138434 - U2 snRNA snRNA -153 35 2 1008 200 96 0 chr17 27300180 27300400 -58138080 + AluJo SINE Alu 68 308 -4 21 36 0 0 chr17 27300772 27300800 -58137680 + AT_rich Low_complexity Low_complexity 1 28 0 323 345 134 39 chr17 27302315 27302599 -58135881 - L2 LINE L2 -50 3222 2912 254 312 128 0 chr17 27303048 27303173 -58135307 + MIR SINE MIR 2 142 -120 230 276 35 0 chr17 27303172 27303230 -58135250 + L2 LINE L2 3254 3313 0 * 606 247 145 31 chr17 27303306 27303533 -58134947 + MIR SINE MIR 7 259 -3 2346 93 3 3 chr17 27303618 27303919 -58134561 + AluSc SINE Alu 1 301 -8 1320 191 39 39 chr17 27304276 27304558 -58133922 - AluJo SINE Alu -30 282 1 1730 163 27 7 chr17 27304924 27305218 -58133262 + AluSx SINE Alu 5 304 -8 598 187 41 65 chr17 27305244 27305367 -58133113 + FLAM_A SINE Alu 1 120 -13 195 269 15 60 chr17 27305498 27305565 -58132915 + MER5B DNA MER1_type 66 129 -49 835 119 8 8 chr17 27305647 27305765 -58132715 + FRAM SINE Alu 41 158 -18 319 243 0 0 chr17 27305768 27305838 -58132642 - L2 LINE L2 -770 2544 2475 336 208 236 28 chr17 27306016 27306122 -58132358 - MER5A DNA MER1_type -1 188 61 234 116 0 0 chr17 27306328 27306371 -58132109 + (A)n Simple_repeat Simple_repeat 1 43 0 1834 169 0 10 chr17 27306660 27306961 -58131519 + AluJo SINE Alu 1 298 -14 991 188 0 0 chr17 27307617 27307782 -58130698 - AluJb SINE Alu -11 301 137 1853 144 22 4 chr17 27308473 27308750 -58129730 + AluSx SINE Alu 1 282 -30 449 304 101 9 chr17 27308779 27309006 -58129474 - L2 LINE L2 -9 3304 3057 27 49 0 0 chr17 27309532 27309573 -58128907 + AT_rich Low_complexity Low_complexity 1 41 0 1060 223 50 37 chr17 27310379 27310679 -58127801 + L1ME3 LINE L1 5794 6097 -65 460 269 10 0 chr17 27311065 27311169 -58127311 + MIR SINE MIR 47 151 -111 325 304 22 0 chr17 27311312 27311404 -58127076 + MIR SINE MIR 47 140 -122 2137 117 14 0 chr17 27311737 27311904 -58126576 - AluSg SINE Alu -15 295 121 246 32 0 0 chr17 27311904 27311935 -58126545 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2137 117 14 0 chr17 27311935 27312058 -58126422 - AluSg SINE Alu -189 121 1 1105 163 0 6 chr17 27312205 27312383 -58126097 - AluJb SINE Alu -16 296 120 311 75 0 0 chr17 27312400 27312440 -58126040 - MER4E LTR ERV1 -74 692 653 1964 154 10 0 chr17 27312444 27312737 -58125743 - AluJb SINE Alu -16 296 1 2469 86 0 0 chr17 27313970 27314271 -58124209 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr17 27315635 27315656 -58122824 + AT_rich Low_complexity Low_complexity 1 21 0 2211 119 0 7 chr17 27316916 27317218 -58121262 - AluSx SINE Alu -12 300 1 1932 115 38 45 chr17 27318042 27318356 -58120124 - AluSx SINE Alu 0 312 1 2490 71 10 0 chr17 27320557 27320865 -58117615 - AluY SINE Alu 0 311 1 260 194 224 10 chr17 27321098 27321196 -58117284 - L1ME4a LINE L1 -19 6102 5984 30 27 0 0 chr17 27323744 27323781 -58114699 + AT_rich Low_complexity Low_complexity 1 37 0 399 270 30 0 chr17 27323853 27323953 -58114527 - MIR SINE MIR -157 105 3 2484 71 3 3 chr17 27324284 27324595 -58113885 - AluY SINE Alu 0 311 1 298 243 10 29 chr17 27324608 27324711 -58113769 - L1MC5 LINE L1 -30 7931 7831 219 69 0 0 chr17 27326199 27326228 -58112252 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2074 99 3 18 chr17 27326228 27326511 -58111969 - AluSx SINE Alu -33 279 1 870 219 24 5 chr17 27326844 27327049 -58111431 + MIR SINE MIR 8 216 -46 801 200 0 0 chr17 27328976 27329106 -58109374 + FLAM_A SINE Alu 1 130 -3 790 243 115 15 chr17 27329518 27329938 -58108542 - L1MC4a LINE L1 -349 5814 5670 181 188 0 0 chr17 27329938 27329970 -58108510 + L2 LINE L2 3265 3296 -17 400 186 24 97 chr17 27329970 27330094 -58108386 - L1MC4a LINE L1 -2113 5695 5581 200 233 0 0 chr17 27330341 27330384 -58108096 + T-rich Low_complexity Low_complexity 1 43 0 2177 117 0 3 chr17 27330478 27330777 -58107703 + AluSx SINE Alu 1 298 -14 1598 188 22 0 chr17 27330921 27331197 -58107283 + AluJo SINE Alu 1 282 -30 2283 84 3 3 chr17 27331203 27331490 -58106990 - AluSg SINE Alu -22 288 2 225 289 13 0 chr17 27331503 27331579 -58106901 + L1ME LINE L1 5315 5391 -771 29 28 0 0 chr17 27331650 27331686 -58106794 + AT_rich Low_complexity Low_complexity 1 36 0 1237 125 184 0 chr17 27331686 27331972 -58106508 - Tigger3(Golem) DNA MER2_type -7 3022 6 373 206 109 0 chr17 27331991 27332083 -58106397 + L1ME LINE L1 5670 5771 -350 389 188 29 0 chr17 27334460 27334529 -58103951 - AluSc SINE Alu -21 278 208 972 147 0 0 chr17 27334550 27334693 -58103787 - FLAM_C SINE Alu 0 143 1 276 213 164 0 chr17 27334908 27334969 -58103511 + Charlie1 DNA MER1_type 1 71 -2690 1558 170 95 11 chr17 27334981 27335351 -58103129 + Charlie1 DNA MER1_type 2360 2760 -1 6015 111 44 10 chr17 27335863 27336698 -58101782 - L1PB2 LINE L1 0 6151 5274 183 100 0 0 chr17 27336698 27336728 -58101752 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6015 111 44 10 chr17 27336728 27337065 -58101415 - L1PB2 LINE L1 -877 5274 4950 249 305 62 51 chr17 27337615 27337835 -58100645 + MIR SINE MIR 5 216 -46 455 322 134 22 chr17 27339451 27339905 -58098575 + L1MEc LINE L1 1948 2452 -3944 745 228 125 115 chr17 27340020 27340692 -58097788 + L1MEc LINE L1 2420 3098 -3117 882 263 122 24 chr17 27341007 27341376 -58097104 + HAL1 LINE L1 67 471 -2036 317 227 303 8 chr17 27341406 27341538 -58096942 + HAL1 LINE L1 545 715 -1792 280 227 280 8 chr17 27341549 27341681 -58096799 + L1MEc LINE L1 3702 3869 -2346 1809 129 32 58 chr17 27342417 27342727 -58095753 - AluSx SINE Alu -10 302 1 487 269 106 82 chr17 27343140 27343594 -58094886 + L2 LINE L2 2814 3278 -35 198 250 0 0 chr17 27343965 27344013 -58094467 + MIR SINE MIR 81 128 -134 2039 85 4 4 chr17 27344050 27344309 -58094171 + AluSc SINE Alu 35 293 -16 245 216 14 54 chr17 27345186 27345260 -58093220 + CT-rich Low_complexity Low_complexity 3 73 0 385 285 16 16 chr17 27345484 27345607 -58092873 - L1MC4a LINE L1 -1909 5899 5777 426 183 15 99 chr17 27346055 27346150 -58092330 + LTR2 LTR ERV1 42 126 -323 2277 65 18 0 chr17 27346150 27346465 -58092015 + AluY SINE Alu 1 320 0 426 183 15 99 chr17 27346465 27346499 -58091981 + LTR2 LTR ERV1 126 161 -288 1565 195 48 6 chr17 27346603 27346916 -58091564 + LTR2 LTR ERV1 124 449 0 207 227 55 82 chr17 27349194 27349304 -58089176 - MIR SINE MIR -109 153 47 1433 118 26 31 chr17 27350586 27350815 -58087665 - AluJb SINE Alu -53 259 32 180 111 0 0 chr17 27352823 27352850 -58085630 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 496 203 0 37 chr17 27355692 27355879 -58082601 + (TA)n Simple_repeat Simple_repeat 1 180 0 695 233 35 20 chr17 27355941 27356143 -58082337 - L1MC4 LINE L1 -150 7892 7688 186 71 0 0 chr17 27356438 27356466 -58082014 + (CACCT)n Simple_repeat Simple_repeat 3 30 0 2113 103 14 3 chr17 27557183 27557475 -57881005 - AluSq SINE Alu -18 295 1 442 68 34 0 chr17 27557509 27557568 -57880912 + Alu SINE Alu 2 62 -249 1451 191 86 27 chr17 27557575 27557975 -57880505 + L1 LINE L1 4904 5330 -816 1379 196 53 18 chr17 27557975 27558260 -57880220 + AluJo SINE Alu 1 295 -17 654 181 109 0 chr17 27558269 27558407 -57880073 + L1MC1 LINE L1 6174 6326 -7 318 152 0 15 chr17 27558414 27558480 -57880000 + L1MC1 LINE L1 5817 5881 -452 549 188 10 0 chr17 27558491 27558592 -57879888 + MSTD LTR MaLR 1 102 -294 1842 136 27 7 chr17 27559038 27559339 -57879141 + AluSx SINE Alu 1 307 -5 315 160 40 40 chr17 27559765 27559840 -57878640 + L1ME4a LINE L1 6046 6120 -1 1280 181 96 0 chr17 27560506 27560777 -57877703 + MSTD LTR MaLR 100 396 0 2121 135 49 94 chr17 27560777 27561243 -57877237 + L1MC1 LINE L1 5884 6328 -5 2024 127 3 3 chr17 27561248 27561540 -57876940 + AluSx SINE Alu 1 292 -20 1709 129 0 0 chr17 27561582 27561830 -57876650 + AluSg SINE Alu 62 309 -1 697 228 119 32 chr17 27562045 27562264 -57876216 - L2 LINE L2 0 3313 3076 2140 91 0 30 chr17 27562270 27562567 -57875913 - AluSc SINE Alu -21 288 1 910 81 0 0 chr17 27562587 27562710 -57875770 - AluY SINE Alu -2 309 187 222 37 0 0 chr17 27563056 27563083 -57875397 + (TG)n Simple_repeat Simple_repeat 2 28 0 2244 84 0 0 chr17 27563083 27563367 -57875113 - AluSx SINE Alu -27 285 2 1121 226 88 32 chr17 27563368 27563553 -57874927 - L1MC5 LINE L1 -462 7499 7326 387 0 0 0 chr17 27563553 27563596 -57874884 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 189 0 0 0 chr17 27563595 27563616 -57874864 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 1121 226 88 32 chr17 27563596 27563837 -57874643 - L1MC5 LINE L1 -635 7326 7070 339 309 59 7 chr17 27563837 27563973 -57874507 - MIR3 SINE MIR -29 179 37 266 228 158 44 chr17 27563997 27564111 -57874369 + MIR SINE MIR 24 150 -112 489 242 65 8 chr17 27564382 27564506 -57873974 - MER45A DNA AcHobo -44 134 4 231 236 56 0 chr17 27564578 27564650 -57873830 - MLT1K LTR MaLR 0 588 513 1473 167 110 3 chr17 27564748 27565030 -57873450 + AluJb SINE Alu 1 312 0 1665 156 30 0 chr17 27565043 27565312 -57873168 + AluJo SINE Alu 3 279 -33 189 0 0 0 chr17 27565312 27565333 -57873147 + (CAAT)n Simple_repeat Simple_repeat 3 23 0 904 54 31 16 chr17 27565394 27565523 -57872957 + AluY SINE Alu 1 131 -180 1128 101 0 6 chr17 27565634 27565792 -57872688 + AluYa5 SINE Alu 145 301 -10 2132 95 3 7 chr17 27565917 27566212 -57872268 - AluSx SINE Alu -18 294 1 392 242 36 68 chr17 27566274 27566522 -57871958 + HAL1 LINE L1 2222 2461 -46 1178 209 0 4 chr17 27566528 27566758 -57871722 + MER46A DNA MER2_type 8 236 0 2079 114 17 0 chr17 27566940 27567238 -57871242 - AluSq SINE Alu -10 303 1 275 260 190 40 chr17 27567297 27567497 -57870983 - MLT1K LTR MaLR -349 239 10 199 274 39 0 chr17 27567790 27567841 -57870639 + MIR SINE MIR 91 143 -65 287 257 143 0 chr17 27568442 27568547 -57869933 - L2 LINE L2 0 3313 3194 1067 289 80 54 chr17 27568681 27569166 -57869314 - MLT1K LTR MaLR 0 588 91 189 303 32 103 chr17 27569240 27569395 -57869085 - MIR SINE MIR -60 202 59 777 142 0 0 chr17 27569607 27569720 -57868760 + FLAM_C SINE Alu 6 118 -25 264 108 0 0 chr17 27569743 27569780 -57868700 + FLAM SINE Alu 82 118 -15 28 0 0 26 chr17 27569783 27569805 -57868675 + AT_rich Low_complexity Low_complexity 1 23 -15 2105 126 3 0 chr17 27569805 27570115 -57868365 + AluSx SINE Alu 1 311 -1 28 0 0 26 chr17 27570115 27570131 -57868349 + AT_rich Low_complexity Low_complexity 23 38 0 190 132 0 79 chr17 27570196 27570234 -57868246 + MIR SINE MIR 21 55 -207 256 159 125 102 chr17 27570760 27570848 -57867632 + MIR3 SINE MIR 104 193 -15 375 23 0 0 chr17 27570889 27570933 -57867547 + (CAT)n Simple_repeat Simple_repeat 3 46 0 353 249 181 35 chr17 27571333 27571541 -57866939 - MLT1K LTR MaLR -349 239 3 355 253 42 0 chr17 27571684 27571779 -57866701 + MIR3 SINE MIR 62 160 -48 1839 206 47 49 chr17 27571781 27572292 -57866188 + L1ME1 LINE L1 5652 6161 -5 225 158 0 0 chr17 27572350 27572388 -57866092 - MLT1K LTR MaLR -29 559 522 1983 149 0 9 chr17 27572389 27572704 -57865776 + AluJo SINE Alu 1 312 0 987 260 80 31 chr17 27572740 27572851 -57865629 - MLT1K LTR MaLR -57 531 427 2159 96 20 3 chr17 27572851 27573152 -57865328 - AluY SINE Alu -5 306 1 987 260 80 31 chr17 27573152 27573445 -57865035 - MLT1K LTR MaLR -161 427 36 241 250 44 0 chr17 27575058 27575126 -57863354 + MIR SINE MIR 79 149 -113 285 287 66 25 chr17 27575370 27575492 -57862988 + MIR SINE MIR 20 146 -62 1268 153 90 60 chr17 27575696 27575825 -57862655 + AluJo SINE Alu 1 125 -187 2175 111 0 0 chr17 27575825 27576131 -57862349 + AluSx SINE Alu 3 308 -4 1268 153 90 60 chr17 27576131 27576302 -57862178 + AluJo SINE Alu 125 310 -2 389 259 23 38 chr17 27576313 27576444 -57862036 - MER5B DNA MER1_type -49 129 1 1055 132 11 29 chr17 27577322 27577496 -57860984 - AluJo/FRAM SINE Alu -9 303 133 1569 166 20 33 chr17 27577497 27577798 -57860682 - AluJo SINE Alu -15 297 1 283 267 0 58 chr17 27579561 27579647 -57858833 + MER5B DNA MER1_type 45 125 -53 430 189 63 0 chr17 27582405 27582500 -57855980 - MER53 DNA DNA 0 189 89 1751 154 25 7 chr17 27582504 27582790 -57855690 - AluJo SINE Alu -21 291 1 426 260 39 8 chr17 27582794 27582921 -57855559 - MER5B DNA MER1_type -22 156 26 852 132 7 21 chr17 27583365 27583509 -57854971 + FLAM_C SINE Alu 1 142 -1 769 189 24 12 chr17 27583537 27583706 -57854774 - MER5B DNA MER1_type 0 178 8 905 111 0 42 chr17 27584440 27584584 -57853896 + AluSq/x SINE Alu 1 138 -175 2195 123 0 0 chr17 27587143 27587453 -57851027 - AluSx SINE Alu -2 310 1 377 150 0 0 chr17 27587498 27587558 -57850922 + MER53 DNA DNA 2 61 -128 510 137 63 40 chr17 27587563 27587701 -57850779 - MLT1C LTR MaLR -262 128 1 206 306 117 68 chr17 27588037 27588302 -57850178 - L2 LINE L2 -18 3254 2977 372 256 109 29 chr17 27588517 27588654 -57849826 + MER5B DNA MER1_type 28 175 -3 181 258 78 39 chr17 27588675 27588803 -57849677 - L2 LINE L2 -226 3046 2914 1274 232 52 7 chr17 27588937 27589247 -57849233 - MLT1B LTR MaLR -8 382 59 564 222 211 0 chr17 27589658 27589829 -57848651 - MIR SINE MIR -12 250 44 453 224 60 128 chr17 27590944 27591067 -57847413 + MLT1G1 LTR MaLR 77 207 -348 1933 104 58 4 chr17 27591067 27591345 -57847135 - AluSq SINE Alu -20 293 1 453 224 60 128 chr17 27591345 27591639 -57846841 + MLT1G1 LTR MaLR 207 555 0 228 163 0 20 chr17 27591702 27591751 -57846729 + Alu SINE Alu 250 297 -5 2179 107 0 3 chr17 27591751 27592060 -57846420 + AluSc SINE Alu 1 308 -1 194 185 56 56 chr17 27592295 27592349 -57846131 - MIR SINE MIR -55 153 100 947 236 105 54 chr17 27592466 27592937 -57845543 - MLT1H LTR MaLR 0 549 15 1284 121 0 5 chr17 27592949 27593139 -57845341 - AluSg/x SINE Alu -22 288 100 1077 262 51 39 chr17 27593258 27593549 -57844931 + L1MC5 LINE L1 7476 7762 -199 2001 112 3 7 chr17 27593549 27593835 -57844645 + AluSx SINE Alu 1 285 -27 222 37 0 0 chr17 27593835 27593862 -57844618 + (CA)n Simple_repeat Simple_repeat 2 28 0 1077 262 51 39 chr17 27593862 27594000 -57844480 + L1MC5 LINE L1 7761 7911 -50 198 242 65 0 chr17 27594556 27594618 -57843862 + MIR SINE MIR 81 146 -62 363 200 39 12 chr17 27594679 27594772 -57843708 - MER20B DNA MER1_type -90 129 32 226 288 16 124 chr17 27594895 27595152 -57843328 - L2 LINE L2 -231 3041 2813 1893 110 0 0 chr17 27595158 27595448 -57843032 - AluSx SINE Alu 0 320 31 1392 171 49 19 chr17 27595687 27595974 -57842506 - AluJo SINE Alu 0 306 12 195 208 10 115 chr17 27596141 27596237 -57842243 - L2 LINE L2 -75 3238 3153 205 318 131 9 chr17 27597662 27597769 -57840711 - MIR SINE MIR -49 213 94 245 319 43 35 chr17 27597971 27598087 -57840393 + L2 LINE L2 3136 3252 -20 425 284 84 45 chr17 27599911 27599950 -57838530 - MIR3 SINE MIR -8 200 164 1897 133 3 56 chr17 27599950 27600273 -57838207 - AluSx SINE Alu -6 306 1 425 284 84 45 chr17 27600273 27600388 -57838092 - MIR3 SINE MIR -44 164 40 1973 130 7 10 chr17 27600623 27600924 -57837556 + AluSx SINE Alu 1 300 -12 239 254 16 16 chr17 27601290 27601353 -57837127 + MIR SINE MIR 76 138 -70 1144 229 99 3 chr17 27601456 27601758 -57836722 + MLT1D LTR MaLR 169 499 -6 2490 61 0 3 chr17 27601989 27602301 -57836179 - AluY SINE Alu 0 311 1 2237 105 0 0 chr17 27602301 27602607 -57835873 - AluSx SINE Alu -6 306 1 2022 113 0 26 chr17 27602607 27602909 -57835571 - AluSc SINE Alu -15 294 1 273 151 0 0 chr17 27603001 27603054 -57835426 + (CA)n Simple_repeat Simple_repeat 1 53 0 1139 134 93 10 chr17 27603375 27603569 -57834911 + MER6B DNA MER2_type 1 210 0 745 316 86 9 chr17 27604136 27604462 -57834018 - L1ME4a LINE L1 -189 5932 5582 300 179 0 0 chr17 27604773 27604829 -57833651 + MIR SINE MIR 105 160 -102 258 333 10 10 chr17 27605468 27605567 -57832913 - MER5A DNA MER1_type -25 164 66 299 261 68 0 chr17 27605689 27605747 -57832733 + MER5B DNA MER1_type 6 73 -105 2748 10 0 3 chr17 27605747 27606057 -57832423 + AluYa5 SINE Alu 1 309 -2 299 261 68 0 chr17 27606057 27606086 -57832394 + MER5B DNA MER1_type 73 99 -79 283 270 146 66 chr17 27606108 27606245 -57832235 + MIR3 SINE MIR 11 158 -50 498 285 20 13 chr17 27606252 27606403 -57832077 + MER117 DNA MER1_type 8 159 -38 1970 116 0 44 chr17 27606719 27607038 -57831442 + AluSq SINE Alu 1 305 -8 249 258 0 0 chr17 27607251 27607344 -57831136 + (TCCA)n Simple_repeat Simple_repeat 4 96 0 769 254 76 97 chr17 27607460 27607484 -57830996 - L2 LINE L2 -65 3248 3225 2140 109 0 0 chr17 27607484 27607758 -57830722 + AluSg SINE Alu 1 274 -36 769 254 76 97 chr17 27607758 27608100 -57830380 - L2 LINE L2 -88 3225 2888 2527 69 3 0 chr17 27608100 27608403 -57830077 + AluY SINE Alu 1 304 -7 769 254 76 97 chr17 27608403 27608417 -57830063 - L2 LINE L2 -425 2888 2875 764 166 0 7 chr17 27608433 27608572 -57829908 - MER41B LTR ERV1 -29 606 469 192 111 0 0 chr17 27608592 27608628 -57829852 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1457 96 10 0 chr17 27608630 27608827 -57829653 - AluSq SINE Alu -24 289 91 207 229 0 72 chr17 27609117 27609200 -57829280 + G-rich Low_complexity Low_complexity 4 80 0 25 65 0 0 chr17 27609529 27609575 -57828905 + GC_rich Low_complexity Low_complexity 1 46 0 470 306 114 29 chr17 27609905 27610186 -57828294 - L3 LINE CR1 -356 1221 917 2695 32 0 10 chr17 27610516 27610826 -57827654 - AluY SINE Alu -4 307 1 972 143 0 0 chr17 27610925 27611058 -57827422 + AluJo/FLAM SINE Alu 1 133 -179 1928 139 10 7 chr17 27611060 27611348 -57827132 + AluSx SINE Alu 2 290 -22 263 376 16 0 chr17 27611641 27611766 -57826714 + MIR3 SINE MIR 76 202 -6 2517 81 7 0 chr17 27612180 27612487 -57825993 - AluSq SINE Alu -4 309 1 543 237 13 33 chr17 27612862 27613014 -57825466 - L1MC5 LINE L1 -523 7438 7290 286 295 84 0 chr17 27613184 27613279 -57825201 - L2 LINE L2 -184 3088 2986 273 217 60 12 chr17 27613528 27613611 -57824869 - MIR3 SINE MIR -40 168 82 268 195 407 0 chr17 27613987 27614100 -57824380 - LTR16A LTR ERVL -259 191 33 233 271 36 22 chr17 27614638 27614748 -57823732 - MIR SINE MIR -13 195 81 1745 112 93 0 chr17 27615047 27615332 -57823148 + AluSx SINE Alu 1 309 0 314 265 161 49 chr17 27615381 27615604 -57822876 - MER112 DNA MER1_type -12 248 1 1972 145 0 43 chr17 27615650 27615975 -57822505 - AluJb SINE Alu -1 311 1 365 226 0 52 chr17 27615975 27616090 -57822390 + MER113 DNA MER1_type? 4 112 -409 1615 116 104 37 chr17 27617099 27617367 -57821113 - AluJo SINE Alu -26 286 1 28 91 0 0 chr17 27617991 27618068 -57820412 + GC_rich Low_complexity Low_complexity 1 77 0 22 0 0 0 chr17 27618348 27618370 -57820110 + GC_rich Low_complexity Low_complexity 1 22 0 438 286 171 6 chr17 27622002 27622177 -57816303 + MIR SINE MIR 27 230 -32 24 53 0 0 chr17 27622218 27622256 -57816224 + AT_rich Low_complexity Low_complexity 1 38 0 2298 128 0 0 chr17 27622256 27622568 -57815912 - AluSx SINE Alu 0 312 1 291 140 0 0 chr17 27622570 27622620 -57815860 + (T)n Simple_repeat Simple_repeat 1 50 0 1864 148 50 3 chr17 27622620 27622918 -57815562 - AluSx SINE Alu 0 312 1 28 0 0 0 chr17 27622918 27622946 -57815534 + AT_rich Low_complexity Low_complexity 1 28 0 271 287 85 11 chr17 27623114 27623208 -57815272 + MIR SINE MIR 9 109 -153 209 169 62 77 chr17 27623308 27623373 -57815107 - L2 LINE L2 -35 3237 3174 276 301 139 54 chr17 27624780 27624946 -57813534 + MIR SINE MIR 56 235 -27 1016 157 0 30 chr17 27625342 27625354 -57813126 + AluJo SINE Alu 122 133 -179 1671 184 10 16 chr17 27625354 27625658 -57812822 + AluJo SINE Alu 1 302 -10 1016 157 0 30 chr17 27625658 27625811 -57812669 + AluJo SINE Alu 133 282 -30 1993 136 83 6 chr17 27626646 27627237 -57811243 - MER39 LTR ERV1 0 707 4 812 143 0 8 chr17 27628312 27628431 -57810049 - FLAM_C SINE Alu -25 118 1 875 237 127 3 chr17 27629149 27629440 -57809040 + MER46C DNA MER2_type 1 327 -11 2088 135 6 13 chr17 27629742 27630054 -57808426 + AluSx SINE Alu 1 310 -2 386 242 105 33 chr17 27631338 27631491 -57806989 - MER46C DNA MER2_type -174 164 1 276 295 208 7 chr17 27631953 27632102 -57806378 - MER5A DNA MER1_type 0 189 11 223 222 143 16 chr17 27632188 27632251 -57806229 - L2 LINE L2 -209 3063 2993 613 257 109 0 chr17 27632254 27632437 -57806043 - MIR SINE MIR 0 262 60 340 268 66 69 chr17 27632898 27633046 -57805434 - MIR SINE MIR -64 144 41 1555 144 0 0 chr17 27635128 27635350 -57803130 + AluSg/x SINE Alu 84 305 -5 2045 158 42 6 chr17 27635561 27635896 -57802584 + MER7A DNA MER2_type 1 345 -1 2270 101 3 22 chr17 27635956 27636272 -57802208 - AluSg SINE Alu 0 310 1 2056 138 3 7 chr17 27636295 27636600 -57801880 - AluSx SINE Alu -8 304 1 2048 155 0 3 chr17 27637301 27637604 -57800876 - AluJb SINE Alu -10 302 1 2357 89 0 26 chr17 27637653 27637966 -57800514 - AluY SINE Alu -6 305 1 477 164 0 0 chr17 27638077 27638150 -57800330 + AluS SINE Alu 2 74 -238 2163 154 30 3 chr17 27638250 27638619 -57799861 - MER41B LTR ERV1 -256 379 1 732 230 47 24 chr17 27638663 27638876 -57799604 - L2 LINE L2 -866 2448 2231 227 319 116 14 chr17 27638892 27639099 -57799381 + MLT1K LTR MaLR 15 242 -346 396 0 0 0 chr17 27639400 27639444 -57799036 + (CA)n Simple_repeat Simple_repeat 2 45 0 501 277 49 3 chr17 27639619 27639783 -57798697 + MIR SINE MIR 19 186 -50 347 316 11 0 chr17 27640351 27640446 -57798034 + MIR SINE MIR 45 140 -122 487 274 31 40 chr17 27640475 27640585 -57797895 + L1MC4a LINE L1 5517 5626 -2182 3927 102 28 2 chr17 27640585 27641125 -57797355 - MER41A LTR ERV1 0 554 1 487 274 31 40 chr17 27641125 27641228 -57797252 + L1MC4a LINE L1 5626 5730 -2078 2292 113 3 0 chr17 27641228 27641538 -57796942 + AluSx SINE Alu 1 311 -1 949 222 14 0 chr17 27641564 27641780 -57796700 + L1MC4a LINE L1 5719 5937 -1871 237 33 0 0 chr17 27641783 27641813 -57796667 + (CA)n Simple_repeat Simple_repeat 2 31 0 265 192 0 26 chr17 27642456 27642534 -57795946 + CT-rich Low_complexity Low_complexity 1 76 0 854 248 19 105 chr17 27642543 27642807 -57795673 + MLT1J LTR MaLR 180 414 -97 2038 156 3 0 chr17 27642807 27643114 -57795366 + AluSx SINE Alu 1 308 -4 854 248 19 105 chr17 27643114 27643164 -57795316 + MLT1J LTR MaLR 414 467 -44 446 287 77 0 chr17 27643312 27643455 -57795025 - MLT1I LTR MaLR -231 178 25 265 304 0 14 chr17 27643488 27643557 -57794923 - MIR SINE MIR -81 127 60 2440 79 0 0 chr17 27643577 27643867 -57794613 + AluSq SINE Alu 11 300 -13 591 331 41 48 chr17 27644598 27645130 -57793350 + L1MC/D LINE L1 2425 3008 -3532 2507 94 3 0 chr17 27645177 27645486 -57792994 - AluSp SINE Alu -3 310 1 609 303 81 17 chr17 27645556 27645777 -57792703 + L1MC/D LINE L1 4918 5124 -1416 2653 36 7 0 chr17 27645777 27646086 -57792394 + AluY SINE Alu 1 311 0 609 303 81 17 chr17 27646086 27646099 -57792381 + L1MC/D LINE L1 5124 5135 -1405 1950 137 0 7 chr17 27646099 27646384 -57792096 + AluSx SINE Alu 1 283 -29 609 303 81 17 chr17 27646384 27646667 -57791813 + L1MC/D LINE L1 5135 5469 -1071 1620 192 0 19 chr17 27646853 27647166 -57791314 + AluSg SINE Alu 3 309 -1 1286 126 0 25 chr17 27647300 27647498 -57790982 + AluY SINE Alu 119 311 0 298 289 120 34 chr17 27647498 27647645 -57790835 + L1MC/D LINE L1 5691 5824 -2378 270 0 0 0 chr17 27647645 27647675 -57790805 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 298 289 120 34 chr17 27647675 27647818 -57790662 + L1MC/D LINE L1 5824 6006 -2196 5637 217 61 51 chr17 27648031 27648999 -57789481 - L1M4c LINE L1 -3093 3551 2594 721 161 7 35 chr17 27648999 27649142 -57789338 - L1MA3 LINE L1 0 6305 6167 5637 217 61 51 chr17 27649142 27649165 -57789315 - L1M4c LINE L1 -4050 2594 2573 2357 88 0 14 chr17 27649165 27649460 -57789020 - AluSc SINE Alu -18 291 1 5637 217 61 51 chr17 27649460 27650338 -57788142 - L1M4c LINE L1 -4071 2573 1705 1984 160 0 0 chr17 27650338 27650638 -57787842 - AluSx SINE Alu -12 300 1 5637 217 61 51 chr17 27650638 27650954 -57787526 - L1M4c LINE L1 -4939 1705 1394 1191 182 186 24 chr17 27650954 27651207 -57787273 + AluSg SINE Alu 1 294 -6 5637 217 61 51 chr17 27651207 27651928 -57786552 - L1M4c LINE L1 -5250 1394 486 2185 91 0 18 chr17 27651928 27652234 -57786246 + AluSx SINE Alu 4 304 0 5637 217 61 51 chr17 27652234 27652530 -57785950 - L1M4c LINE L1 -6158 486 194 759 324 47 52 chr17 27652534 27652920 -57785560 - L1M4 LINE L1 -1195 4951 4568 2282 269 40 48 chr17 27652970 27653076 -57785404 + L1ME3A LINE L1 2901 3006 -3140 2106 126 0 7 chr17 27653076 27653403 -57785077 - AluSx SINE Alu 0 312 1 2282 269 40 48 chr17 27653403 27653432 -57785048 + L1ME3A LINE L1 3006 3034 -3112 2446 169 14 2 chr17 27653432 27653845 -57784635 - MER47B DNA MER2_type 0 418 1 2282 269 40 48 chr17 27653845 27654039 -57784441 + L1ME3A LINE L1 3034 3228 -2918 1715 180 0 7 chr17 27654039 27654349 -57784131 + AluJo SINE Alu 1 308 0 2282 269 40 48 chr17 27654349 27654546 -57783934 + L1ME3A LINE L1 3228 3425 -2721 2077 121 7 0 chr17 27654546 27654826 -57783654 + AluSp SINE Alu 11 292 -21 2282 269 40 48 chr17 27654826 27655353 -57783127 + L1ME3A LINE L1 3425 3949 -2197 712 152 0 0 chr17 27655359 27655471 -57783009 - FLAM_C SINE Alu -2 141 30 2162 234 78 78 chr17 27655487 27655800 -57782680 + L1ME3A LINE L1 3934 4246 -1916 2008 142 4 0 chr17 27655800 27656113 -57782367 - AluSq SINE Alu 0 314 1 2162 234 78 78 chr17 27656113 27656657 -57781823 + L1ME3A LINE L1 4246 4789 -1373 249 33 0 0 chr17 27656657 27656687 -57781793 + (TG)n Simple_repeat Simple_repeat 1 30 0 2162 234 78 78 chr17 27656687 27657441 -57781039 + L1ME3A LINE L1 4789 5559 -603 1871 153 20 10 chr17 27657441 27657736 -57780744 - AluSx SINE Alu -14 298 1 2162 234 78 78 chr17 27657736 27658233 -57780247 + L1ME3A LINE L1 5559 6055 -107 2127 117 0 7 chr17 27658614 27658922 -57779558 - AluSx SINE Alu -6 306 1 214 243 100 0 chr17 27659155 27659225 -57779255 + L3 LINE CR1 80 156 -1421 856 196 25 0 chr17 27659464 27659622 -57778858 - AluJb SINE Alu -14 298 137 1028 271 133 8 chr17 27659738 27660099 -57778381 - MLT1I LTR MaLR -3 406 1 1883 105 0 59 chr17 27660469 27660773 -57777707 + AluSx SINE Alu 1 286 -26 22 0 0 0 chr17 27660805 27660827 -57777653 + AT_rich Low_complexity Low_complexity 1 22 0 762 139 46 26 chr17 27660827 27660978 -57777502 - HERVH LTR ERV1 -7559 154 1 821 105 39 65 chr17 27660978 27661131 -57777349 - LTR7 LTR ERV1 0 450 302 1785 139 25 0 chr17 27661253 27661533 -57776947 - AluSx SINE Alu -25 287 1 1267 154 80 136 chr17 27661533 27661909 -57776571 - MER57A LTR ERV1 -6 397 43 182 171 29 0 chr17 27661932 27661967 -57776513 + L3 LINE CR1 431 466 -1111 1171 172 250 40 chr17 27661970 27662342 -57776138 + LTR7 LTR ERV1 1 450 0 255 355 43 7 chr17 27662345 27662483 -57775997 + L3 LINE CR1 468 610 -967 742 179 0 0 chr17 27662880 27662992 -57775488 + AluSq/x SINE Alu 1 112 -201 3366 122 18 6 chr17 27662992 27663494 -57774986 + MER9 LTR ERVK 4 511 0 4507 101 30 21 chr17 27663494 27664150 -57774330 + HERVK9 LTR ERVK 1 662 -5254 23422 86 14 1 chr17 27664150 27668030 -57770450 + HERVK9 LTR ERVK 1625 5634 -282 2183 136 11 13 chr17 27668056 27668410 -57770070 + HERVK9 LTR ERVK 5635 5916 0 3392 106 41 4 chr17 27668410 27668903 -57769577 + MER9 LTR ERVK 1 511 0 920 193 0 6 chr17 27668935 27669101 -57769379 + FRAM SINE Alu 1 165 -1 283 207 18 63 chr17 27669323 27669434 -57769046 + L2 LINE L2 3079 3184 -129 480 217 0 0 chr17 27669451 27669543 -57768937 + MER34 LTR ERV1 5 96 -446 2043 115 0 0 chr17 27669620 27669922 -57768558 - AluSx SINE Alu 0 305 4 2121 120 0 0 chr17 27669933 27670232 -57768248 - AluSx SINE Alu -13 299 1 1765 117 0 55 chr17 27670256 27670546 -57767934 - AluSx SINE Alu -15 297 24 1478 167 33 20 chr17 27670715 27671015 -57767465 - AluJo SINE Alu 0 312 9 2075 95 3 0 chr17 27671053 27671336 -57767144 - AluSq SINE Alu -29 284 1 1388 200 20 76 chr17 27671338 27671822 -57766658 + LTR9 LTR ERV1 61 475 -137 605 175 74 58 chr17 27671819 27672008 -57766472 + LTR19C LTR ERV1 588 779 0 * 1992 122 3 3 chr17 27672023 27672317 -57766163 - AluSq SINE Alu -19 294 1 3698 107 10 0 chr17 27672360 27672872 -57765608 + MER41B LTR ERV1 1 517 -118 1724 135 4 18 chr17 27672872 27673021 -57765459 - AluSp SINE Alu -2 311 166 3905 84 328 0 chr17 27673021 27673643 -57764837 + LTR12 LTR ERV1 1 826 0 1724 135 4 18 chr17 27673643 27673774 -57764706 - AluSp SINE Alu -147 166 35 933 81 0 0 chr17 27673774 27673898 -57764582 + MER41A LTR ERV1 431 554 0 342 0 0 0 chr17 27674057 27674095 -57764385 + (TTA)n Simple_repeat Simple_repeat 1 38 0 1279 184 133 30 chr17 27674357 27674628 -57763852 + AluSc SINE Alu 1 299 0 899 214 78 6 chr17 27674863 27675081 -57763399 + MLT2B1 LTR ERVL 3 217 -236 312 70 0 0 chr17 27675097 27675140 -57763340 + (TC)n Simple_repeat Simple_repeat 2 44 0 1816 227 127 20 chr17 27675789 27676326 -57762154 + L1MC4 LINE L1 6488 7081 -961 859 260 138 16 chr17 27676331 27676490 -57761990 + L1MC4 LINE L1 7413 7551 -491 2024 172 121 5 chr17 27676490 27676903 -57761577 - LOR1b LTR ERV1 0 461 1 859 260 138 16 chr17 27676903 27677055 -57761425 + L1MC4 LINE L1 7551 7762 -280 799 206 146 10 chr17 27677056 27677255 -57761225 - MLT1G LTR MaLR -3 587 362 * 1339 147 9 0 chr17 27677246 27677457 -57761023 + LOR1b LTR ERV1 211 423 -38 * 1349 198 122 23 chr17 27677455 27677828 -57760652 - MLT1G LTR MaLR -209 386 1 271 246 94 43 chr17 27677830 27677894 -57760586 + L1MC4 LINE L1 7758 7817 -225 2161 82 20 3 chr17 27677894 27678188 -57760292 - AluSq SINE Alu -10 303 5 271 246 94 43 chr17 27678188 27678261 -57760219 + L1MC4 LINE L1 7817 7902 -140 444 349 121 4 chr17 27678305 27678537 -57759943 + L1ME LINE L1 5260 5518 -646 365 308 70 32 chr17 27678574 27678740 -57759740 - L1ME4a LINE L1 -263 5858 5700 1795 170 0 3 chr17 27678740 27679040 -57759440 + AluJo SINE Alu 1 299 -13 207 0 0 0 chr17 27679040 27679063 -57759417 + (TA)n Simple_repeat Simple_repeat 1 23 0 365 308 70 32 chr17 27679063 27679080 -57759400 - L1ME4a LINE L1 -420 5701 5667 2109 107 0 32 chr17 27679655 27679965 -57758515 + AluSx SINE Alu 1 300 -12 277 241 0 0 chr17 27680157 27680240 -57758240 + L1ME3A LINE L1 5225 5307 -839 1033 150 0 0 chr17 27680255 27680415 -57758065 + AluSg/x SINE Alu 135 294 -18 609 252 73 34 chr17 27680443 27680736 -57757744 + L1ME3A LINE L1 5324 5625 -537 649 241 14 7 chr17 27680738 27680879 -57757601 + MLT1H1 LTR MaLR 1 142 -413 344 228 62 62 chr17 27681074 27681219 -57757261 + MLT1H1 LTR MaLR 180 324 -271 308 167 5 5 chr17 27681305 27681375 -57757105 + MLT1G LTR MaLR 526 590 0 574 282 50 19 chr17 27681375 27681682 -57756798 + L1ME3A LINE L1 5621 5948 -214 408 200 0 0 chr17 27681952 27682037 -57756443 + GA-rich Low_complexity Low_complexity 3 87 0 2090 86 0 36 chr17 27682043 27682345 -57756135 + AluSg1 SINE Alu 1 291 -18 1161 121 0 0 chr17 27682345 27682519 -57755961 + AluSc SINE Alu 132 305 -4 180 184 26 0 chr17 27682547 27682585 -57755895 - MIR SINE MIR -165 97 59 841 191 165 5 chr17 27682726 27682850 -57755630 + MLT1A1 LTR MaLR 3 106 -259 2217 156 47 40 chr17 27682850 27683273 -57755207 - MSTB LTR MaLR 0 426 1 841 191 165 5 chr17 27683273 27683336 -57755144 + MLT1A1 LTR MaLR 106 220 -145 483 127 14 0 chr17 27683334 27683405 -57755075 + MLT1A1 LTR MaLR 252 323 -42 * 194 172 109 78 chr17 27684074 27684138 -57754342 + MIR3 SINE MIR 105 170 -38 272 338 65 7 chr17 27684216 27684370 -57754110 - MER20B DNA MER1_type -614 169 7 2394 46 0 7 chr17 27684462 27684765 -57753715 - AluY SINE Alu -10 301 1 1647 112 8 8 chr17 27685423 27685672 -57752808 + AluSx SINE Alu 64 312 0 203 329 95 58 chr17 27685677 27685814 -57752666 + MIR SINE MIR 57 198 -64 2193 94 0 46 chr17 27686083 27686411 -57752069 - AluSq SINE Alu 0 313 1 2974 204 34 27 chr17 27686827 27687297 -57751183 - MER82 DNA MER2_type -1 652 176 1899 147 0 10 chr17 27687297 27687611 -57750869 + AluSx SINE Alu 1 311 -1 2974 204 34 27 chr17 27687611 27687761 -57750719 - MER82 DNA MER2_type -477 176 28 565 283 178 48 chr17 27687754 27688210 -57750270 + LTR67 LTR ERVL 31 545 -12 * 914 184 79 16 chr17 27688841 27689031 -57749449 - MLT1A2 LTR MaLR 0 374 173 296 62 0 42 chr17 27689034 27689082 -57749398 + (GGGAGA)n Simple_repeat Simple_repeat 3 48 0 645 144 0 66 chr17 27689182 27689363 -57749117 + (GGGAGA)n Simple_repeat Simple_repeat 1 169 0 761 170 88 6 chr17 27689382 27689541 -57748939 - MLT1A2 LTR MaLR -218 172 1 221 307 270 0 chr17 27689573 27689710 -57748770 + MIR3 SINE MIR 24 197 -11 678 179 179 6 chr17 27690249 27690405 -57748075 + MER5A DNA MER1_type 7 189 0 387 284 116 13 chr17 27690402 27690557 -57747923 + MIR3 SINE MIR 1 171 -37 * 467 168 32 32 chr17 27690936 27691031 -57747449 - MER5A DNA MER1_type -1 188 94 664 163 76 70 chr17 27691041 27691213 -57747267 + MLT1B LTR MaLR 1 173 -217 959 178 14 33 chr17 27691215 27691429 -57747051 - AluSx SINE Alu -102 210 1 206 245 57 0 chr17 27692259 27692312 -57746168 - MIR3 SINE MIR -25 183 128 320 203 0 0 chr17 27692566 27692635 -57745845 - AluJ/monomer SINE Alu 0 302 234 241 288 245 10 chr17 27692638 27693030 -57745450 + L2 LINE L2 2447 2930 -384 216 169 261 0 chr17 27693411 27693476 -57745004 - MIR SINE MIR -87 175 94 447 264 71 21 chr17 27693476 27693616 -57744864 + L1ME LINE L1 136 282 -5923 * 1938 278 49 37 chr17 27693589 27694177 -57744303 + L1ME LINE L1 1054 1658 -4738 2261 100 0 3 chr17 27694177 27694487 -57743993 + AluY SINE Alu 1 309 -2 1938 278 49 37 chr17 27694487 27694788 -57743692 + L1ME LINE L1 1658 1954 -4442 41506 65 7 4 chr17 27694869 27700996 -57737484 - L1PA5 LINE L1 -1 6153 5 1813 151 7 3 chr17 27701529 27701834 -57736646 + AluJb SINE Alu 1 306 -6 516 231 101 111 chr17 27702022 27702585 -57735895 + LTR33A LTR ERVL 1 523 0 510 258 26 16 chr17 27702635 27702786 -57735694 + MIR SINE MIR 5 154 -55 239 272 52 12 chr17 27703240 27703344 -57735136 - MIR SINE MIR -60 148 86 953 123 0 0 chr17 27703405 27703567 -57734913 + AluSc SINE Alu 144 305 0 1400 181 3 58 chr17 27703579 27703714 -57734766 + AluJo SINE Alu 1 142 -170 1656 154 7 4 chr17 27703714 27703987 -57734493 - AluSx SINE Alu -23 289 16 1400 181 3 58 chr17 27703987 27704161 -57734319 + AluJo SINE Alu 142 293 -19 186 206 0 0 chr17 27704250 27704284 -57734196 - L2 LINE L2 -18 3254 3221 275 324 57 0 chr17 27704319 27704424 -57734056 - MIR SINE MIR -114 148 38 411 318 52 57 chr17 27704730 27704922 -57733558 + L2 LINE L2 2871 3061 -211 307 316 65 32 chr17 27705038 27705193 -57733287 - MER5B DNA MER1_type -18 160 1 599 247 0 16 chr17 27705262 27705279 -57733201 + GA-rich Low_complexity Low_complexity 1 17 -1384 5587 92 24 70 chr17 27705279 27706145 -57732335 - LTR12 LTR ERV1 0 826 1 599 247 0 16 chr17 27706145 27706303 -57732177 + GA-rich Low_complexity Low_complexity 17 176 -1225 2081 102 9 19 chr17 27706303 27706618 -57731862 + AluSx SINE Alu 1 312 0 599 247 0 16 chr17 27706618 27706687 -57731793 + GA-rich Low_complexity Low_complexity 176 1401 0 461 268 78 13 chr17 27706819 27706972 -57731508 + MIR SINE MIR 32 194 -68 284 282 225 0 chr17 27706987 27707129 -57731351 - MER5A DNA MER1_type -7 182 9 1878 180 148 9 chr17 27707350 27707788 -57730692 - MLT1D LTR MaLR -6 499 1 259 331 162 0 chr17 27708952 27709088 -57729392 + MIR SINE MIR 3 160 -102 231 114 0 0 chr17 27709286 27709321 -57729159 + (TC)n Simple_repeat Simple_repeat 2 36 0 1977 163 0 10 chr17 27709340 27709646 -57728834 - AluJb SINE Alu -9 303 1 361 264 42 28 chr17 27709761 27709905 -57728575 - MIR SINE MIR -34 228 83 273 29 0 0 chr17 27710461 27710495 -57727985 + (CA)n Simple_repeat Simple_repeat 2 35 0 424 163 23 35 chr17 27710645 27710731 -57727749 + FLAM_A SINE Alu 1 85 -57 21 0 0 0 chr17 27710809 27710830 -57727650 + AT_rich Low_complexity Low_complexity 1 21 0 542 248 86 74 chr17 27710837 27711194 -57727286 + L1ME3A LINE L1 2143 2460 -3755 2420 89 0 13 chr17 27711194 27711509 -57726971 + AluY SINE Alu 1 311 0 542 248 86 74 chr17 27711509 27711577 -57726903 + L1ME3A LINE L1 2460 2526 -3689 615 275 41 32 chr17 27711582 27711920 -57726560 + L1ME3A LINE L1 4246 4586 -1629 * 1577 174 50 30 chr17 27711916 27712033 -57726447 + L1M4 LINE L1 4963 5076 -1070 2009 71 114 4 chr17 27712033 27712314 -57726166 - AluSx SINE Alu 0 312 1 1577 174 50 30 chr17 27712314 27712592 -57725888 + L1M4 LINE L1 5076 5366 -780 696 104 0 38 chr17 27712604 27712710 -57725770 + AluSc SINE Alu 35 136 -173 668 197 0 0 chr17 27712834 27712966 -57725514 + L1MA10 LINE L1 6196 6327 -7 1510 257 124 33 chr17 27712967 27713503 -57724977 + L1ME3A LINE L1 4553 5039 -1200 1704 196 33 0 chr17 27713503 27713804 -57724676 - AluJo SINE Alu 0 312 2 1510 257 124 33 chr17 27713804 27714009 -57724471 + L1ME3A LINE L1 5039 5224 -1015 1762 177 3 3 chr17 27714009 27714292 -57724188 + AluJb SINE Alu 10 292 -20 1510 257 124 33 chr17 27714292 27714902 -57723578 + L1ME3A LINE L1 5224 6037 -202 334 214 60 68 chr17 27714931 27715048 -57723432 + L1ME3A LINE L1 6003 6118 -121 350 296 54 75 chr17 27715136 27715322 -57723158 - MLT1L LTR MaLR -418 197 16 374 322 53 20 chr17 27715725 27715877 -57722603 - MIR SINE MIR -85 177 21 197 329 53 20 chr17 27716269 27716421 -57722059 - L3 LINE CR1 -109 1468 1312 2840 197 97 31 chr17 27716596 27717161 -57721319 + Zaphod DNA AcHobo 43 672 -3359 1559 120 50 173 chr17 27717161 27717315 -57721165 - MER1B DNA MER1_type -2373 337 256 2314 101 3 0 chr17 27717315 27717613 -57720867 + AluSq SINE Alu 1 299 -14 1559 120 50 173 chr17 27717613 27717840 -57720640 - MER1B DNA MER1_type -2454 256 3 2840 197 97 31 chr17 27717840 27718038 -57720442 + Zaphod DNA AcHobo 672 856 -3175 859 243 67 0 chr17 27718038 27718248 -57720232 - MER58A DNA MER1_type 0 224 1 2231 103 3 35 chr17 27718325 27718637 -57719843 - AluSx SINE Alu -10 302 1 1274 192 20 28 chr17 27718753 27719008 -57719472 + AluJo SINE Alu 36 288 -24 701 160 71 30 chr17 27719031 27719116 -57719364 + Zaphod DNA AcHobo 3596 3676 -355 1801 189 0 0 chr17 27719116 27719423 -57719057 + AluJb SINE Alu 1 307 -5 701 160 71 30 chr17 27719423 27719506 -57718974 + Zaphod DNA AcHobo 3676 3771 -260 2078 106 11 3 chr17 27719507 27719812 -57718668 - AluSx SINE Alu 0 307 1 1997 172 26 3 chr17 27719843 27719972 -57718508 - Tigger3(Golem) DNA MER2_type -879 2149 2024 1226 150 132 79 chr17 27719972 27720252 -57718228 - AluJb SINE Alu -17 295 1 1997 172 26 3 chr17 27720252 27720465 -57718015 - Tigger3(Golem) DNA MER2_type -1004 2024 2 205 172 17 52 chr17 27720465 27720523 -57717957 + MIR SINE MIR 152 207 -55 2344 97 3 0 chr17 27720656 27720954 -57717526 - AluSp SINE Alu -14 299 1 21 36 0 0 chr17 27720977 27721005 -57717475 + AT_rich Low_complexity Low_complexity 1 28 0 204 273 156 0 chr17 27721217 27721294 -57717186 - L3 LINE CR1 -478 1099 1011 496 230 145 7 chr17 27722743 27722895 -57715585 + MIR SINE MIR 42 214 -48 426 270 86 6 chr17 27723253 27723416 -57715064 + MIR SINE MIR 35 210 -52 424 217 0 61 chr17 27723617 27723732 -57714748 - MIR SINE MIR -84 124 17 351 327 58 9 chr17 27724122 27724345 -57714135 - L2 LINE L2 -1217 2097 1864 423 295 83 5 chr17 27724416 27724609 -57713871 - MIR SINE MIR -3 259 52 1889 176 0 0 chr17 27724923 27725235 -57713245 + AluJb SINE Alu 1 312 0 291 54 0 0 chr17 27725250 27725287 -57713193 + (CA)n Simple_repeat Simple_repeat 2 38 0 301 293 168 6 chr17 27725536 27725703 -57712777 - L2 LINE L2 0 3272 3079 227 302 35 0 chr17 27725998 27726084 -57712396 + MIR SINE MIR 58 146 -62 635 280 89 0 chr17 27726820 27727045 -57711435 - MIR SINE MIR -12 250 6 476 290 31 52 chr17 27727086 27727376 -57711104 - L3 LINE CR1 -24 1553 1270 21 0 0 0 chr17 27727594 27727615 -57710865 + AT_rich Low_complexity Low_complexity 1 21 0 4423 159 18 16 chr17 27727798 27728135 -57710345 + L1MCa LINE L1 163 498 -5928 2127 99 0 7 chr17 27728135 27728440 -57710040 + AluSg SINE Alu 1 303 0 4423 159 18 16 chr17 27728440 27728893 -57709587 + L1MCa LINE L1 498 955 -5471 1807 164 3 16 chr17 27728893 27729197 -57709283 + AluJb SINE Alu 1 300 -12 241 150 0 0 chr17 27729197 27729237 -57709243 - L1MCa LINE L1 -5345 1081 1042 1010 121 13 0 chr17 27729247 27729404 -57709076 + L1MCa LINE L1 1769 1927 -4499 466 250 125 6 chr17 27729405 27729573 -57708907 - MIR3 SINE MIR -12 196 9 222 239 45 0 chr17 27730181 27730248 -57708232 - L2 LINE L2 -4 3309 3240 2217 125 0 3 chr17 27730301 27730598 -57707882 + AluSx SINE Alu 1 296 -16 679 264 6 0 chr17 27730706 27730880 -57707600 + L1MEd LINE L1 31 205 -5914 896 286 63 76 chr17 27730940 27731545 -57706935 + L1MEd LINE L1 424 1020 -5099 225 204 0 0 chr17 27731545 27731589 -57706891 + Charlie1 DNA MER1_type 793 836 -1925 21 71 0 0 chr17 27731589 27731631 -57706849 + AT_rich Low_complexity Low_complexity 1 42 0 1330 140 21 91 chr17 27731631 27731791 -57706689 - L1MA7 LINE L1 -3 6288 6118 2018 129 7 13 chr17 27731791 27732094 -57706386 - AluJb SINE Alu -11 301 1 1330 140 21 91 chr17 27732094 27732358 -57706122 - L1MA7 LINE L1 -173 6118 5926 1080 164 27 41 chr17 27732360 27732536 -57705944 - Tigger1 DNA MER2_type 0 2418 2243 2273 88 0 3 chr17 27732536 27732843 -57705637 - AluSq SINE Alu 0 306 1 1080 164 27 41 chr17 27732843 27732885 -57705595 - Tigger1 DNA MER2_type -175 2243 2202 659 215 0 40 chr17 27732868 27733017 -57705463 - Tigger1 DNA MER2_type -2255 163 21 * 6644 148 13 15 chr17 27733022 27734474 -57704006 - L1MA7 LINE L1 -366 5925 4481 1769 140 44 4 chr17 27734474 27734800 -57703680 - AluSq SINE Alu 0 337 1 6644 148 13 15 chr17 27734800 27735129 -57703351 - L1MA7 LINE L1 -1810 4481 4153 592 193 57 7 chr17 27735129 27735269 -57703211 + Charlie1 DNA MER1_type 803 949 -1812 922 268 24 20 chr17 27735305 27735559 -57702921 - MER69 DNA AcHobo -673 553 299 230 304 36 89 chr17 27735629 27735741 -57702739 + MLT2E LTR ERVL 69 174 -454 266 229 0 0 chr17 27735925 27735986 -57702494 + ERVL LTR ERVL 3877 3937 -1827 1910 150 17 0 chr17 27735987 27736281 -57702199 + AluSx SINE Alu 3 301 -11 792 264 62 94 chr17 27736395 27736493 -57701987 + L1ME3 LINE L1 4745 4845 -1317 1951 178 37 6 chr17 27736493 27736847 -57701633 + MLT1A1 LTR MaLR 1 365 0 792 264 62 94 chr17 27736847 27737162 -57701318 + L1ME3 LINE L1 4845 5169 -993 819 205 12 30 chr17 27737162 27737328 -57701152 + FRAM SINE Alu 4 166 0 792 264 62 94 chr17 27737328 27738123 -57700357 + L1ME3 LINE L1 5169 5952 -210 1400 142 21 97 chr17 27738317 27738632 -57699848 - AluJb SINE Alu 0 308 16 295 139 125 14 chr17 27738906 27738978 -57699502 + L1MEd LINE L1 1167 1246 -4873 2539 53 0 16 chr17 27739007 27739311 -57699169 + AluY SINE Alu 1 299 -12 496 246 31 8 chr17 27739324 27739454 -57699026 + MER94 DNA DNA 1 133 -1 231 305 123 13 chr17 27740075 27740229 -57698251 - L1MC/D LINE L1 -2084 5724 5554 258 194 0 0 chr17 27740263 27740325 -57698155 + A-rich Low_complexity Low_complexity 1 62 0 1272 70 0 0 chr17 27740455 27740613 -57697867 + AluY SINE Alu 153 310 -1 241 243 158 40 chr17 27740621 27740823 -57697657 + L1ME3A LINE L1 1843 2068 -4472 23 0 0 0 chr17 27740890 27740913 -57697567 + AT_rich Low_complexity Low_complexity 1 23 0 2292 110 3 0 chr17 27741217 27741517 -57696963 + AluSq SINE Alu 1 301 -12 2150 246 79 69 chr17 27741599 27741864 -57696616 + L1ME3A LINE L1 2524 2785 -3755 2068 102 49 30 chr17 27741864 27742169 -57696311 + AluSx SINE Alu 1 311 -1 2150 246 79 69 chr17 27742169 27743178 -57695302 + L1ME3A LINE L1 2785 3820 -2720 1449 129 183 38 chr17 27743178 27743441 -57695039 + AluJb SINE Alu 1 301 -11 2150 246 79 69 chr17 27743441 27743766 -57694714 + L1ME3A LINE L1 3820 4140 -2400 586 165 0 0 chr17 27743789 27743880 -57694600 + U6 snRNA snRNA 17 107 0 4392 83 40 2 chr17 27743880 27744485 -57693995 + L1MA2 LINE L1 5445 6072 -232 1141 110 13 0 chr17 27744514 27744669 -57693811 + AluSq SINE Alu 108 264 -49 1747 48 35 4 chr17 27744669 27744896 -57693584 + L1MA1 LINE L1 6069 6302 0 322 305 35 28 chr17 27744922 27745063 -57693417 + L1ME3A LINE L1 4146 4287 -2253 1537 201 121 51 chr17 27745121 27745289 -57693191 + MSTB2 LTR MaLR 15 170 -287 1735 164 30 33 chr17 27745289 27745593 -57692887 - AluJo SINE Alu -9 303 1 1537 201 121 51 chr17 27745593 27745837 -57692643 + MSTB2 LTR MaLR 170 456 -1 25 0 0 0 chr17 27745837 27745862 -57692618 + AT_rich Low_complexity Low_complexity 1 25 0 685 297 27 20 chr17 27745862 27746155 -57692325 + L1ME3A LINE L1 4348 4642 -1898 892 174 7 13 chr17 27746160 27746309 -57692171 + FRAM SINE Alu 16 163 -13 1939 147 45 0 chr17 27746343 27746629 -57691851 + AluSx SINE Alu 3 301 -11 1229 299 31 28 chr17 27746657 27747404 -57691076 + L1ME3A LINE L1 4705 5453 -1087 2188 128 7 0 chr17 27747417 27747713 -57690767 - AluSx SINE Alu -14 298 1 2291 81 0 0 chr17 27747723 27748007 -57690473 - AluY SINE Alu -7 304 21 2198 180 69 65 chr17 27748109 27748599 -57689881 + L1ME2 LINE L1 5586 6073 -91 2183 116 7 3 chr17 27748599 27748909 -57689571 + AluSq SINE Alu 1 311 -2 2198 180 69 65 chr17 27748909 27748974 -57689506 + L1ME2 LINE L1 6073 6146 -18 2559 61 0 0 chr17 27748974 27749271 -57689209 + AluY SINE Alu 1 297 -14 413 270 127 36 chr17 27749304 27749654 -57688826 + L1ME3A LINE L1 5591 5986 -579 2116 124 0 13 chr17 27749813 27750112 -57688368 + AluSg SINE Alu 1 295 -15 964 136 34 0 chr17 27750112 27750259 -57688221 + AluSg/x SINE Alu 132 283 -27 225 0 0 0 chr17 27750259 27750284 -57688196 + (CA)n Simple_repeat Simple_repeat 2 26 0 421 211 135 58 chr17 27750320 27750528 -57687952 + L1ME3A LINE L1 6139 6362 -196 2130 117 7 0 chr17 27750914 27751223 -57687257 + AluSq SINE Alu 1 311 0 1546 190 42 47 chr17 27752941 27753325 -57685155 - MLT1B LTR MaLR -8 382 1 252 0 0 0 chr17 27753428 27753456 -57685024 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 2419 86 0 0 chr17 27753718 27754009 -57684471 - AluSg SINE Alu -19 291 1 731 157 92 160 chr17 27755062 27755356 -57683124 + LTR12 LTR ERV1 1 274 -440 285 259 12 0 chr17 27755368 27755449 -57683031 + LTR30 LTR ERV1 539 620 -102 697 197 25 0 chr17 27755454 27755576 -57682904 + LTR12 LTR ERV1 360 484 -230 427 250 47 20 chr17 27756079 27756227 -57682253 + MIR SINE MIR 36 187 -75 545 225 28 62 chr17 27756276 27756454 -57682026 - MIR SINE MIR -43 219 48 2223 110 17 0 chr17 27756455 27756756 -57681724 - AluSx SINE Alu -6 306 1 2163 102 10 7 chr17 27757517 27757810 -57680670 + AluSc SINE Alu 1 294 -15 1063 138 0 0 chr17 27757810 27757955 -57680525 + AluSg/x SINE Alu 135 279 -31 271 18 89 0 chr17 27757957 27758013 -57680467 + (TA)n Simple_repeat Simple_repeat 1 61 0 490 231 8 8 chr17 27758052 27758173 -57680307 + MIR SINE MIR 105 225 -37 231 272 116 27 chr17 27758306 27758453 -57680027 - MIR3 SINE MIR -8 200 41 190 233 137 23 chr17 27758945 27759032 -57679448 - L2 LINE L2 -65 3227 3136 2051 139 14 0 chr17 27759442 27759736 -57678744 + AluSx SINE Alu 1 298 -14 552 275 134 40 chr17 27759982 27760356 -57678124 - MLT1J LTR MaLR -3 508 100 264 271 59 12 chr17 27760381 27760466 -57678014 - MER5A DNA MER1_type 0 189 101 2381 87 0 3 chr17 27760531 27760829 -57677651 + AluSq SINE Alu 7 303 -10 212 360 12 0 chr17 27761266 27761352 -57677128 - MIR SINE MIR -174 88 2 2643 111 205 147 chr17 27761627 27762543 -57675937 + LTR12 LTR ERV1 57 714 0 329 331 86 29 chr17 27763138 27763313 -57675167 - MER5A DNA MER1_type 0 189 5 189 381 58 13 chr17 27763580 27763735 -57674745 + MIR SINE MIR 14 175 -87 241 100 40 0 chr17 27763953 27764003 -57674477 + (TG)n Simple_repeat Simple_repeat 2 53 0 362 267 70 105 chr17 27764103 27764388 -57674092 - L1ME4a LINE L1 -4 6117 5843 2298 109 0 6 chr17 27764521 27764832 -57673648 - AluSx SINE Alu -2 310 2 595 294 72 28 chr17 27764986 27765427 -57673053 + L1ME4a LINE L1 5414 5873 -248 1751 147 23 36 chr17 27765980 27766286 -57672194 + AluJo SINE Alu 11 312 0 236 130 22 0 chr17 27766288 27766334 -57672146 + GA-rich Low_complexity Low_complexity 1 47 0 503 318 48 71 chr17 27766337 27766408 -57672072 + L1MEd LINE L1 564 635 -5484 2156 99 46 3 chr17 27766408 27766692 -57671788 + AluSx SINE Alu 1 296 -16 503 318 48 71 chr17 27766692 27766972 -57671508 + L1MEd LINE L1 635 907 -5212 445 269 185 36 chr17 27767716 27768024 -57670456 + L1ME4a LINE L1 5731 6084 -37 186 317 173 0 chr17 27768091 27768195 -57670285 + MIR SINE MIR 3 124 -138 * 658 216 32 63 chr17 27768194 27768384 -57670096 - L2 LINE L2 -2 3311 3128 333 259 24 0 chr17 27768391 27768476 -57670004 + MIR SINE MIR 162 248 -14 207 278 79 29 chr17 27769442 27769595 -57668885 - MIR SINE MIR -13 249 51 576 208 0 75 chr17 27769649 27769769 -57668711 - MER81 DNA DNA -1 113 3 2006 131 31 0 chr17 27770033 27770324 -57668156 + AluSq SINE Alu 1 300 -13 395 232 176 8 chr17 27770391 27770516 -57667964 + MIR3 SINE MIR 21 166 -42 464 225 33 3 chr17 27770545 27770671 -57667809 - MIR3 SINE MIR -53 155 19 411 235 61 35 chr17 27771116 27771231 -57667249 - MIR SINE MIR -139 123 6 196 200 0 80 chr17 27771394 27771444 -57667036 - L2 LINE L2 0 3272 3227 208 250 141 0 chr17 27771517 27771581 -57666899 - L2 LINE L2 -213 3059 2987 372 279 27 0 chr17 27771887 27771998 -57666482 - MIR SINE MIR -100 162 49 288 0 0 0 chr17 27772078 27772110 -57666370 + (A)n Simple_repeat Simple_repeat 1 32 0 186 347 71 47 chr17 27772133 27772430 -57666050 - L2 LINE L2 -15 3257 2954 330 279 86 79 chr17 27772562 27772589 -57665891 - MLT1K LTR MaLR -263 325 300 2052 108 18 4 chr17 27772589 27772894 -57665586 + AluSx SINE Alu 1 309 0 330 279 86 79 chr17 27772894 27773145 -57665335 - MLT1K LTR MaLR -288 300 44 2299 123 0 0 chr17 27773468 27773776 -57664704 + AluY SINE Alu 2 309 -2 2263 104 10 0 chr17 27775105 27775394 -57663086 + AluSg SINE Alu 1 292 -18 1059 316 23 25 chr17 27775466 27775951 -57662529 + MLT1K LTR MaLR 19 502 -86 354 291 240 0 chr17 27776878 27777057 -57661423 + MLT1L LTR MaLR 317 538 -77 1719 189 37 0 chr17 27777057 27777233 -57661247 - AluJo SINE Alu -4 308 115 216 0 0 0 chr17 27777233 27777257 -57661223 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1719 189 37 0 chr17 27777257 27777377 -57661103 - AluJo SINE Alu -197 115 1 523 227 42 0 chr17 27777411 27777530 -57660950 + MER5A DNA MER1_type 1 124 -65 551 178 0 0 chr17 27777532 27777633 -57660847 + AluSg/x SINE Alu 209 309 -1 204 188 71 94 chr17 27777633 27777718 -57660762 - MER5A DNA MER1_type -105 84 2 1432 116 0 0 chr17 27778151 27778341 -57660139 - AluSg/x SINE Alu -11 299 110 1433 174 0 0 chr17 27778482 27778712 -57659768 - AluSq SINE Alu -13 300 71 1965 84 4 8 chr17 27778813 27779063 -57659417 - AluSg SINE Alu -61 249 1 1003 198 0 12 chr17 27779072 27779239 -57659241 - AluJb SINE Alu -10 302 138 746 283 152 18 chr17 27779328 27779671 -57658809 + L2 LINE L2 2925 3313 0 1672 157 34 0 chr17 27779838 27780100 -57658380 - AluJb SINE Alu -15 297 27 1593 182 3 23 chr17 27780200 27780507 -57657973 - AluJo SINE Alu -11 301 1 2556 51 0 13 chr17 27780590 27780904 -57657576 - AluY SINE Alu 0 311 2 216 0 0 0 chr17 27781794 27781818 -57656662 + (A)n Simple_repeat Simple_repeat 1 24 0 2085 146 3 10 chr17 27781869 27782003 -57656477 + AluSx SINE Alu 1 134 -178 2064 135 10 7 chr17 27782003 27782307 -57656173 + AluSq SINE Alu 1 305 -8 2085 146 3 10 chr17 27782307 27782481 -57655999 + AluSx SINE Alu 134 307 -5 841 181 0 7 chr17 27782490 27782639 -57655841 + AluJb SINE Alu 160 307 -5 1760 151 42 0 chr17 27782639 27782923 -57655557 + AluSx SINE Alu 1 296 -16 319 152 0 0 chr17 27782926 27782972 -57655508 - L1MC4 LINE L1 -1339 6703 6658 23 33 0 0 chr17 27782978 27783008 -57655472 + AT_rich Low_complexity Low_complexity 1 30 0 953 129 7 7 chr17 27783460 27783615 -57654865 - AluY SINE Alu -21 290 136 2375 93 0 0 chr17 27783762 27784053 -57654427 + AluSc SINE Alu 1 291 -18 260 225 14 0 chr17 27784189 27784260 -57654220 + L1PB4 LINE L1 6068 6139 -17 2149 115 7 3 chr17 27784263 27784559 -57653921 - AluSg SINE Alu -13 297 1 295 116 0 0 chr17 27784619 27784701 -57653779 + Alu SINE Alu 240 321 0 2475 52 3 16 chr17 27784749 27785054 -57653426 + AluY SINE Alu 1 301 -10 2152 96 7 3 chr17 27785193 27785475 -57653005 + AluSx SINE Alu 1 283 -29 1788 166 3 0 chr17 27785694 27786008 -57652472 + AluY SINE Alu 1 311 0 711 245 148 9 chr17 27786021 27786237 -57652243 + MIR SINE MIR 7 252 -10 225 308 100 23 chr17 27786270 27786400 -57652080 - L2 LINE L2 -1 3271 3132 827 212 65 0 chr17 27786410 27786594 -57651886 + Charlie4 DNA MER1_type 1 196 -1765 686 98 0 0 chr17 27786596 27786688 -57651792 + AluSg/x SINE Alu 202 293 -16 209 196 0 43 chr17 27787083 27787129 -57651351 - MIR3 SINE MIR -17 191 148 1594 73 0 0 chr17 27787217 27787409 -57651071 + AluY SINE Alu 1 192 -119 850 200 12 0 chr17 27787509 27787679 -57650801 - L1MC3 LINE L1 -1060 6725 6554 466 184 11 0 chr17 27787696 27787783 -57650697 - FLAM_A SINE Alu -8 134 47 207 88 0 0 chr17 27787957 27787991 -57650489 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 1994 129 7 17 chr17 27787995 27788282 -57650198 - AluSx SINE Alu -28 284 1 513 186 137 10 chr17 27788392 27788494 -57649986 + FLAM_C SINE Alu 3 117 -16 2564 77 0 0 chr17 27788501 27788812 -57649668 - AluY SINE Alu 0 311 1 2291 95 0 3 chr17 27788813 27789108 -57649372 - AluY SINE Alu -17 294 1 2346 89 10 0 chr17 27789109 27789400 -57649080 - AluSp SINE Alu -19 294 1 845 137 8 0 chr17 27789569 27789686 -57648794 - FLAM_C SINE Alu -15 118 1 464 239 99 42 chr17 27789752 27790086 -57648394 - L1MDa LINE L1 -3965 2575 2223 237 65 0 0 chr17 27790086 27790117 -57648363 + (TG)n Simple_repeat Simple_repeat 2 32 0 381 275 23 0 chr17 27790134 27790265 -57648215 + (TA)n Simple_repeat Simple_repeat 2 135 0 246 284 220 39 chr17 27790274 27790506 -57647974 + L2 LINE L2 2024 2297 -1017 869 214 82 53 chr17 27790726 27791082 -57647398 + L1MDa LINE L1 1836 2201 -4339 246 32 0 0 chr17 27791083 27791114 -57647366 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 403 233 35 35 chr17 27791115 27791231 -57647249 + MIR SINE MIR 131 246 -16 2170 114 14 0 chr17 27791231 27791521 -57646959 + AluSx SINE Alu 1 294 -18 851 148 15 0 chr17 27791706 27791841 -57646639 - FAM SINE Alu -13 172 36 377 206 122 38 chr17 27791843 27791974 -57646506 - HAL1 LINE L1 -867 1640 1499 1237 126 0 0 chr17 27792011 27792185 -57646295 - AluSg/x SINE Alu -5 307 134 394 221 59 143 chr17 27792196 27792281 -57646199 - HAL1 LINE L1 -1026 1481 1390 2314 121 0 0 chr17 27792281 27792594 -57645886 + AluSq SINE Alu 1 313 0 394 221 59 143 chr17 27792594 27792934 -57645546 - HAL1 LINE L1 -1117 1390 1092 2326 115 0 6 chr17 27792964 27793278 -57645202 + AluSp SINE Alu 1 312 -1 1975 206 28 21 chr17 27793278 27793536 -57644944 + MER63B DNA MER1_type 1 265 -797 2295 100 3 3 chr17 27793536 27793836 -57644644 + AluSq SINE Alu 1 300 -13 1975 206 28 21 chr17 27793836 27794010 -57644470 + MER63B DNA MER1_type 265 436 0 2426 72 0 0 chr17 27794054 27794345 -57644135 + AluSg SINE Alu 1 291 -19 2375 107 0 0 chr17 27794505 27794814 -57643666 - AluSx SINE Alu -3 309 1 189 302 0 115 chr17 27794832 27794928 -57643552 - L2 LINE L2 -2 3270 3186 2458 97 0 0 chr17 27794939 27795248 -57643232 - AluSg SINE Alu -1 309 1 2207 105 3 0 chr17 27795448 27795757 -57642723 - AluSp SINE Alu 0 310 1 699 122 0 0 chr17 27795907 27796005 -57642475 - AluSc SINE Alu -14 295 198 188 328 35 0 chr17 27796015 27796073 -57642407 + L2 LINE L2 2684 2743 -571 2021 73 0 8 chr17 27796078 27796325 -57642155 + AluY SINE Alu 52 296 -15 579 179 74 0 chr17 27796758 27796853 -57641627 - AluJo/FRAM SINE Alu -15 297 196 2159 134 13 0 chr17 27796854 27797159 -57641321 - AluSx SINE Alu -3 309 1 21 0 0 0 chr17 27797231 27797252 -57641228 + AT_rich Low_complexity Low_complexity 1 21 0 2639 54 0 0 chr17 27797406 27797703 -57640777 + AluSc SINE Alu 1 297 -12 2099 118 17 3 chr17 27797743 27798039 -57640441 + AluSc SINE Alu 1 300 -9 2427 76 0 3 chr17 27798039 27798340 -57640140 + AluY SINE Alu 1 300 -11 2415 71 3 3 chr17 27798360 27798656 -57639824 + AluY SINE Alu 1 296 -15 1616 101 0 0 chr17 27798815 27799013 -57639467 + AluSg SINE Alu 1 198 -112 1218 120 0 0 chr17 27799013 27799171 -57639309 + AluSg/x SINE Alu 140 297 -15 2157 138 0 0 chr17 27799355 27799660 -57638820 + AluSx SINE Alu 1 305 -7 288 273 44 93 chr17 27800121 27800304 -57638176 - MIR SINE MIR -79 183 10 2123 96 0 58 chr17 27800617 27800758 -57637722 + AluY SINE Alu 1 116 -195 2368 79 0 13 chr17 27800758 27801063 -57637417 + AluY SINE Alu 1 301 -10 2123 96 0 58 chr17 27801063 27801234 -57637246 + AluY SINE Alu 116 295 -16 2172 125 3 0 chr17 27801475 27801780 -57636700 - AluSx SINE Alu -6 306 1 2019 142 3 0 chr17 27801792 27802080 -57636400 - AluSx SINE Alu -23 289 1 1819 244 36 12 chr17 27802105 27802695 -57635785 + L1M4 LINE L1 2373 2976 -3170 2271 105 3 0 chr17 27802718 27803012 -57635468 + AluSx SINE Alu 1 295 -17 782 167 8 30 chr17 27803021 27803153 -57635327 + FLAM_C SINE Alu 5 133 0 2449 123 30 88 chr17 27803158 27803220 -57635260 + L1MA4 LINE L1 5769 5833 -467 2383 88 0 0 chr17 27803220 27803515 -57634965 + AluSg SINE Alu 1 295 -15 2449 123 30 88 chr17 27803515 27803988 -57634492 + L1MA4 LINE L1 5833 6273 -27 747 168 129 43 chr17 27804128 27804337 -57634143 + MER58B DNA MER1_type 105 331 -10 1634 179 51 98 chr17 27804345 27804569 -57633911 + L1ME LINE L1 5073 5306 -860 1906 145 6 46 chr17 27804569 27804893 -57633587 + AluJo SINE Alu 1 311 -1 1634 179 51 98 chr17 27804893 27804942 -57633538 + L1ME LINE L1 5306 5356 -810 1696 164 7 43 chr17 27804942 27805247 -57633233 + AluJo SINE Alu 1 294 -18 1634 179 51 98 chr17 27805247 27805690 -57632790 + L1ME LINE L1 5356 5779 -387 37 52 0 0 chr17 27806623 27806681 -57631799 + GC_rich Low_complexity Low_complexity 1 58 0 28 0 0 0 chr17 27806815 27806843 -57631637 + GC_rich Low_complexity Low_complexity 1 28 0 2463 60 3 3 chr17 27807161 27807462 -57631018 - AluY SINE Alu -9 302 2 2463 57 20 0 chr17 27807863 27808159 -57630321 - AluY SINE Alu -9 302 1 2199 124 3 0 chr17 27808159 27808457 -57630023 - AluSx SINE Alu -13 299 1 1779 161 31 3 chr17 27808457 27808743 -57629737 - AluJo SINE Alu -18 294 1 2105 142 0 0 chr17 27808937 27809246 -57629234 - AluSx SINE Alu -3 309 1 2058 130 3 20 chr17 27809495 27809794 -57628686 - AluSx SINE Alu -18 294 1 1651 211 0 0 chr17 27809794 27810091 -57628389 - AluJo SINE Alu -15 297 1 2325 100 0 0 chr17 27810095 27810395 -57628085 - AluSc SINE Alu -9 300 1 2213 99 0 14 chr17 27810432 27810744 -57627736 - AluSg SINE Alu 0 310 1 434 243 127 114 chr17 27810868 27811308 -57627172 - L2 LINE L2 -19 3294 2849 467 234 0 19 chr17 27811361 27811468 -57627012 - FRAM SINE Alu -6 170 66 937 209 16 6 chr17 27811479 27811661 -57626819 - AluJo SINE Alu -7 305 122 1309 214 3 58 chr17 27811673 27811853 -57626627 - AluJo SINE Alu -21 291 133 2091 116 0 3 chr17 27811853 27812137 -57626343 + AluSg SINE Alu 5 287 -23 1309 214 3 58 chr17 27812137 27812264 -57626216 - AluJo SINE Alu -179 133 1 2399 78 3 7 chr17 27812285 27812594 -57625886 - AluY SINE Alu -3 308 1 1791 106 83 4 chr17 27812604 27812869 -57625611 - AluSc SINE Alu -23 286 1 1794 140 26 0 chr17 27813041 27813306 -57625174 - AluSx SINE Alu -24 288 17 1797 135 50 0 chr17 27813329 27813589 -57624891 - AluSx SINE Alu -23 289 17 456 176 154 27 chr17 27813608 27813804 -57624676 - L1MC/D LINE L1 -694 5472 5287 1083 156 24 143 chr17 27813837 27813864 -57624616 - L1MC/D LINE L1 -849 5297 5268 2174 98 28 0 chr17 27813864 27813986 -57624494 + AluY SINE Alu 1 118 -193 228 35 0 0 chr17 27813986 27814015 -57624465 + (CA)n Simple_repeat Simple_repeat 2 30 0 2174 98 28 0 chr17 27814015 27814179 -57624301 + AluY SINE Alu 118 295 -16 1083 156 24 143 chr17 27814179 27814216 -57624264 - L1MC/D LINE L1 -878 5268 5228 1883 156 9 19 chr17 27814216 27814531 -57623949 + AluJb SINE Alu 1 312 0 1083 156 24 143 chr17 27814531 27814613 -57623867 - L1MC/D LINE L1 -918 5228 5138 2188 138 0 3 chr17 27814613 27814924 -57623556 + AluSx SINE Alu 1 310 -2 1083 156 24 143 chr17 27814924 27815154 -57623326 - L1MC/D LINE L1 -1008 5138 4964 810 183 0 0 chr17 27815184 27815315 -57623165 - FLAM_C SINE Alu -12 131 1 915 176 0 0 chr17 27815370 27815518 -57622962 + AluSg/x SINE Alu 138 285 -27 792 79 22 0 chr17 27815518 27815657 -57622823 + (TA)n Simple_repeat Simple_repeat 2 143 0 864 255 85 17 chr17 27818879 27819232 -57619248 + L1MC4 LINE L1 7623 7999 -43 1977 139 4 0 chr17 27819327 27819608 -57618872 + AluJb SINE Alu 14 295 -17 677 229 193 0 chr17 27819942 27820160 -57618320 - MIR SINE MIR -1 261 2 1431 227 156 22 chr17 27820331 27820634 -57617846 - L1MC4 LINE L1 -371 7671 7410 1691 171 13 45 chr17 27820634 27820944 -57617536 + AluJb SINE Alu 2 301 -11 1431 227 156 22 chr17 27820944 27821261 -57617219 - L1MC4 LINE L1 -632 7410 6968 26 50 0 0 chr17 27821887 27821927 -57616553 + AT_rich Low_complexity Low_complexity 1 40 0 198 0 0 0 chr17 27822261 27822283 -57616197 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 246 62 0 0 chr17 27822621 27822653 -57615827 + (T)n Simple_repeat Simple_repeat 1 32 0 195 280 0 67 chr17 27822675 27822750 -57615730 - MIR SINE MIR -91 171 102 2129 143 0 3 chr17 27825619 27825927 -57612553 + AluJb SINE Alu 1 307 -5 240 149 0 0 chr17 27825988 27826035 -57612445 + (T)n Simple_repeat Simple_repeat 1 47 0 2323 113 0 0 chr17 27827234 27827545 -57610935 + AluY SINE Alu 1 311 0 826 127 0 0 chr17 27827630 27827740 -57610740 + AluJb SINE Alu 178 287 -25 622 281 51 68 chr17 27827751 27828218 -57610262 - L1M4 LINE L1 -1529 4617 4159 1071 177 91 10 chr17 27828219 27828428 -57610052 - AluJo SINE Alu -5 307 82 510 225 70 80 chr17 27828654 27828730 -57609750 - MER2 DNA MER2_type -134 211 136 1277 190 145 22 chr17 27828730 27828999 -57609481 + AluJo SINE Alu 1 302 0 510 225 70 80 chr17 27828999 27829135 -57609345 - MER2 DNA MER2_type -209 136 1 1406 147 8 144 chr17 27829667 27830028 -57608452 + AluJb SINE Alu 1 312 0 817 189 0 20 chr17 27830028 27830176 -57608304 - FRAM SINE Alu -21 155 11 1998 156 3 0 chr17 27830188 27830483 -57607997 - AluJb SINE Alu -16 296 1 204 40 0 0 chr17 27830570 27830595 -57607885 + (GA)n Simple_repeat Simple_repeat 2 26 0 333 0 0 0 chr17 27830682 27830719 -57607761 + (TG)n Simple_repeat Simple_repeat 2 38 0 1235 166 41 68 chr17 27830757 27831052 -57607428 - L1MB7 LINE L1 -16 6168 5882 1874 154 14 7 chr17 27831125 27831411 -57607069 - AluJb SINE Alu -24 288 1 2528 170 44 2 chr17 27831414 27831891 -57606589 - L1MB3 LINE L1 -44 6139 5643 1903 94 0 0 chr17 27831893 27832128 -57606352 - AluSq SINE Alu -78 235 1 455 198 0 78 chr17 27832187 27832303 -57606177 - AluJb SINE Alu -119 193 87 425 275 52 2 chr17 27832342 27832582 -57605898 + MLT1J2 LTR MaLR 125 419 -31 497 258 106 71 chr17 27832633 27832648 -57605832 - MIR SINE MIR -57 205 192 1562 153 122 16 chr17 27832648 27832903 -57605577 - AluJo SINE Alu -30 282 1 497 258 106 71 chr17 27832903 27832959 -57605521 - MIR SINE MIR -70 192 139 1662 125 0 89 chr17 27832959 27833239 -57605241 - AluSx SINE Alu -21 291 37 497 258 106 71 chr17 27833239 27833364 -57605116 - MIR SINE MIR -123 139 1 225 234 16 47 chr17 27833577 27833641 -57604839 + MIR SINE MIR 201 262 0 823 211 93 35 chr17 27833660 27833863 -57604617 + MIR SINE MIR 10 229 -33 21 0 0 0 chr17 27834360 27834381 -57604099 + AT_rich Low_complexity Low_complexity 1 21 0 815 93 0 126 chr17 27834834 27834985 -57603495 + FLAM_C SINE Alu 1 132 -1 2317 118 0 6 chr17 27835077 27835391 -57603089 + AluSx SINE Alu 1 312 0 637 287 29 8 chr17 27835540 27835784 -57602696 - L2 LINE L2 -258 3055 2807 2248 100 13 7 chr17 27835787 27836097 -57602383 + AluSx SINE Alu 1 312 0 2118 124 10 13 chr17 27836333 27836640 -57601840 + AluSx SINE Alu 1 306 -6 909 229 68 16 chr17 27836847 27837096 -57601384 - MLT1H LTR MaLR -259 290 29 2523 45 3 0 chr17 27837222 27837514 -57600966 - AluY SINE Alu -18 293 1 189 0 0 0 chr17 27838511 27838532 -57599948 + (T)n Simple_repeat Simple_repeat 1 21 0 408 55 0 0 chr17 27838939 27838994 -57599486 + (GA)n Simple_repeat Simple_repeat 1 55 0 780 203 15 40 chr17 27839407 27839466 -57599014 - LTR26E LTR ERV1 -423 199 140 2345 90 3 0 chr17 27839466 27839766 -57598714 - AluSp SINE Alu -10 303 3 780 203 15 40 chr17 27839766 27839908 -57598572 - LTR26E LTR ERV1 -482 140 3 790 238 198 9 chr17 27839911 27840260 -57598220 + MLT1D LTR MaLR 82 496 -9 772 141 0 25 chr17 27840361 27840482 -57597998 - AluSg/x SINE Alu -11 299 182 1721 114 23 46 chr17 27840482 27840744 -57597736 + AluSx SINE Alu 44 299 -13 1183 67 0 0 chr17 27840744 27840878 -57597602 + AluSg SINE Alu 1 134 -176 2267 89 3 17 chr17 27840878 27841170 -57597310 + AluY SINE Alu 1 288 -23 3126 152 47 47 chr17 27841175 27841635 -57596845 + L1MA7 LINE L1 5635 6094 -197 2391 104 0 0 chr17 27841635 27841944 -57596536 - AluSg1 SINE Alu 0 309 1 3126 152 47 47 chr17 27841944 27842000 -57596480 + L1MA7 LINE L1 6094 6149 -142 725 181 16 8 chr17 27842000 27842127 -57596353 + FLAM_C SINE Alu 1 128 -5 3126 152 47 47 chr17 27842127 27842266 -57596214 + L1MA7 LINE L1 6148 6291 0 2016 133 25 0 chr17 27842275 27842561 -57595919 + AluSx SINE Alu 4 296 -16 1989 121 66 0 chr17 27842563 27842852 -57595628 + AluSg SINE Alu 1 308 -2 316 113 48 0 chr17 27842852 27842914 -57595566 + GA-rich Low_complexity Low_complexity 1 65 0 2384 61 0 51 chr17 27842914 27843227 -57595253 + AluY SINE Alu 1 297 -14 2143 133 0 3 chr17 27843678 27843971 -57594509 + AluSx SINE Alu 1 292 -20 538 170 259 0 chr17 27843982 27844094 -57594386 + AluJo SINE Alu 3 143 -169 331 260 34 62 chr17 27844094 27844140 -57594340 - MLT1G1 LTR MaLR -451 144 98 2216 125 152 11 chr17 27844140 27844515 -57593965 + MSTA LTR MaLR 1 428 0 331 260 34 62 chr17 27844515 27844614 -57593866 - MLT1G1 LTR MaLR -497 98 3 493 221 0 33 chr17 27844614 27844736 -57593744 + LTR16C LTR ERVL 374 491 0 2187 122 28 73 chr17 27844906 27844937 -57593543 - MSTA LTR MaLR -20 408 377 2225 110 0 0 chr17 27844937 27845267 -57593213 - AluSx SINE Alu 0 330 1 2187 122 28 73 chr17 27845267 27845483 -57592997 - MSTA LTR MaLR -51 377 184 2178 131 0 7 chr17 27845483 27845789 -57592691 + AluSx SINE Alu 1 304 -8 2187 122 28 73 chr17 27845789 27845966 -57592514 - MSTA LTR MaLR -244 184 1 29 28 0 0 chr17 27845973 27846009 -57592471 + AT_rich Low_complexity Low_complexity 1 36 0 2355 88 0 7 chr17 27846063 27846357 -57592123 + AluY SINE Alu 1 292 -19 275 271 43 0 chr17 27846622 27846692 -57591788 + MIR SINE MIR 118 190 -72 717 144 0 32 chr17 27846695 27846820 -57591660 - FLAM_C SINE Alu 0 143 23 2153 118 22 35 chr17 27846852 27846987 -57591493 + AluSq SINE Alu 2 137 -176 2512 67 0 10 chr17 27846987 27847300 -57591180 + AluY SINE Alu 1 310 -1 2153 118 22 35 chr17 27847300 27847477 -57591003 + AluSq SINE Alu 137 310 -3 417 304 24 8 chr17 27847480 27847605 -57590875 - MIR SINE MIR -13 249 123 1881 176 0 25 chr17 27848397 27848716 -57589764 - AluJo SINE Alu 0 312 2 1965 141 0 46 chr17 27848720 27848901 -57589579 - AluSx SINE Alu 0 312 151 2115 114 21 3 chr17 27848901 27849191 -57589289 - AluSg SINE Alu -15 295 1 1965 141 0 46 chr17 27849191 27849336 -57589144 - AluSx SINE Alu -161 151 1 781 191 0 22 chr17 27849348 27849484 -57588996 - FLAM_A SINE Alu 0 133 1 1415 234 117 5 chr17 27849510 27849955 -57588525 - L1ME3 LINE L1 -24 6138 5644 1608 175 25 7 chr17 27849956 27850230 -57588250 - AluJo SINE Alu -32 280 2 255 299 45 0 chr17 27850312 27850379 -57588101 - L2 LINE L2 0 3313 3244 556 133 0 0 chr17 27850402 27850477 -57588003 + AluS SINE Alu 2 76 -237 2183 112 6 22 chr17 27850586 27850898 -57587582 - AluSx SINE Alu -5 307 1 568 109 0 11 chr17 27850925 27851017 -57587463 - FLAM_A SINE Alu -10 132 42 368 199 56 12 chr17 27851030 27851134 -57587346 - MIR SINE MIR -69 139 45 230 301 7 37 chr17 27851656 27851792 -57586688 + GA-rich Low_complexity Low_complexity 4 135 0 200 108 0 27 chr17 27852417 27852454 -57586026 + (GGGA)n Simple_repeat Simple_repeat 4 39 0 245 288 0 54 chr17 27852457 27852568 -57585912 + G-rich Low_complexity Low_complexity 2 106 0 424 304 87 7 chr17 27854216 27854354 -57584126 + MIR SINE MIR 34 182 -80 229 307 11 11 chr17 27854415 27854503 -57583977 + L2 LINE L2 2865 2952 -320 2228 89 51 0 chr17 27854503 27854796 -57583684 - AluSx SINE Alu -4 308 1 2622 52 0 0 chr17 27854796 27855101 -57583379 - AluY SINE Alu -6 305 1 2047 128 21 3 chr17 27855101 27855391 -57583089 - AluSx SINE Alu -17 295 1 670 250 21 0 chr17 27855457 27855601 -57582879 + MIR SINE MIR 18 164 -98 667 212 0 29 chr17 27855604 27855741 -57582739 + FLAM_A SINE Alu 1 133 0 717 64 0 21 chr17 27855798 27855892 -57582588 + AluS SINE Alu 2 93 -220 1704 115 58 0 chr17 27855897 27856140 -57582340 - AluSq SINE Alu -56 257 1 984 125 13 13 chr17 27856262 27856414 -57582066 - AluSx SINE Alu -159 153 2 212 361 0 12 chr17 27856507 27856590 -57581890 + MIR SINE MIR 92 173 -89 1086 208 33 0 chr17 27857004 27857216 -57581264 - MER20 DNA MER1_type 0 219 1 565 258 23 0 chr17 27858201 27858329 -57580151 + MER5A DNA MER1_type 37 167 -22 197 314 73 66 chr17 27858696 27858833 -57579647 + L2 LINE L2 3176 3313 0 2341 83 0 0 chr17 27858837 27859160 -57579320 + AluY SINE Alu 1 323 0 183 255 59 0 chr17 27859357 27859408 -57579072 + MER5C DNA MER1_type 87 140 -184 2319 101 7 0 chr17 27859892 27860190 -57578290 - AluSx SINE Alu -12 300 1 1167 118 56 130 chr17 27860190 27860460 -57578020 + LTR26E LTR ERV1 250 499 -123 22 35 0 0 chr17 27860460 27860489 -57577991 + AT_rich Low_complexity Low_complexity 1 29 0 2046 125 7 0 chr17 27860489 27860785 -57577695 - AluSx SINE Alu -10 302 5 801 187 0 0 chr17 27860790 27860924 -57577556 + LTR26B LTR ERV1 398 531 0 1701 171 0 13 chr17 27860949 27861248 -57577232 + AluJb SINE Alu 1 295 -17 2127 98 7 0 chr17 27861254 27861551 -57576929 + AluSq SINE Alu 1 299 -14 235 171 29 100 chr17 27861555 27861625 -57576855 - MLT1D LTR MaLR -428 77 13 1709 144 18 3 chr17 27862190 27862474 -57576006 - AluSx SINE Alu -24 288 1 906 268 56 56 chr17 27862476 27862675 -57575805 - L2 LINE L2 -16 3297 3099 1946 120 3 0 chr17 27862675 27862958 -57575522 + AluSx SINE Alu 16 299 -13 906 268 56 56 chr17 27862958 27863184 -57575296 - L2 LINE L2 -213 3100 2872 1304 227 221 17 chr17 27863545 27864020 -57574460 + MLT1E2 LTR MaLR 55 626 0 2046 113 0 0 chr17 27864268 27864560 -57573920 + AluSx SINE Alu 1 292 -20 402 272 117 61 chr17 27865264 27865359 -57573121 + MIR SINE MIR 47 135 -127 2119 115 0 0 chr17 27865359 27865654 -57572826 + AluSx SINE Alu 1 295 -17 402 272 117 61 chr17 27865654 27865738 -57572742 + MIR SINE MIR 135 236 -26 822 65 9 0 chr17 27865896 27866003 -57572477 - AluSg/x SINE Alu -12 297 190 864 145 7 13 chr17 27866103 27866255 -57572225 + AluSg/x SINE Alu 160 310 -2 2217 111 0 7 chr17 27866477 27866783 -57571697 - AluSc SINE Alu -5 304 1 222 302 0 69 chr17 27867759 27867875 -57570605 - MIR SINE MIR -50 212 105 567 236 82 48 chr17 27867947 27868155 -57570325 + MIR SINE MIR 37 251 -11 2220 98 0 0 chr17 27868297 27868602 -57569878 - AluSx SINE Alu -7 305 1 562 292 47 43 chr17 27868697 27868974 -57569506 + L2 LINE L2 2820 3097 -216 1955 147 0 3 chr17 27869028 27869341 -57569139 - AluSx SINE Alu 0 312 1 1963 137 7 0 chr17 27870994 27871287 -57567193 + AluSx SINE Alu 1 295 -17 381 273 59 51 chr17 27871908 27872070 -57566410 - MIR SINE MIR -66 142 17 851 199 12 6 chr17 27872282 27872448 -57566032 + FRAM SINE Alu 6 172 -4 27 49 0 0 chr17 27872529 27872570 -57565910 + AT_rich Low_complexity Low_complexity 1 41 0 1726 171 0 13 chr17 27872571 27872870 -57565610 + AluJb SINE Alu 1 295 -17 2604 19 7 3 chr17 27873093 27873401 -57565079 + AluY SINE Alu 1 309 -2 1905 136 0 0 chr17 27876133 27876413 -57562067 - AluSq SINE Alu -33 280 1 21 0 0 0 chr17 27876463 27876484 -57561996 + AT_rich Low_complexity Low_complexity 1 21 0 921 136 0 0 chr17 27876485 27876617 -57561863 - FLAM_C SINE Alu -1 132 1 1403 159 82 0 chr17 27876938 27877208 -57561272 + AluJb SINE Alu 1 292 -20 1443 137 171 23 chr17 27877613 27877876 -57560604 + AluSx SINE Alu 1 302 0 954 161 0 0 chr17 27877878 27878047 -57560433 + AluSg/x SINE Alu 132 300 0 211 348 186 0 chr17 27878278 27878531 -57559949 - L2 LINE L2 -1075 2239 1940 2011 138 0 0 chr17 27878602 27878906 -57559574 - AluSx SINE Alu 0 312 9 515 272 75 0 chr17 27878924 27879071 -57559409 - Charlie8 DNA MER1_type -2259 158 1 427 194 65 0 chr17 27879502 27879595 -57558885 - MER113 DNA MER1_type? -62 459 361 880 139 0 0 chr17 27879596 27879725 -57558755 + FLAM_C SINE Alu 1 129 -4 356 207 62 110 chr17 27879747 27879802 -57558678 - MER113 DNA MER1_type? -148 373 317 2000 92 46 0 chr17 27879802 27880083 -57558397 - AluSg SINE Alu -16 294 1 929 213 0 6 chr17 27880086 27880255 -57558225 - FAM SINE Alu -6 169 2 356 207 62 110 chr17 27880255 27880340 -57558140 - MER113 DNA MER1_type? -206 315 236 1023 145 57 0 chr17 27880553 27880746 -57557734 - L1MB3 LINE L1 -1 6182 5979 263 290 84 37 chr17 27880787 27880894 -57557586 + MIR SINE MIR 107 218 -44 460 295 93 16 chr17 27881518 27881711 -57556769 + L3 LINE CR1 885 1092 -485 380 317 72 19 chr17 27881752 27881960 -57556520 - MIR SINE MIR -24 238 20 837 228 73 10 chr17 27882356 27882562 -57555918 + MIR SINE MIR 14 232 -30 1988 116 0 3 chr17 27882593 27882910 -57555570 + AluSx SINE Alu 1 316 0 245 302 94 0 chr17 27882947 27883043 -57555437 + L2 LINE L2 3132 3236 -36 1700 258 111 15 chr17 27883052 27883594 -57554886 + MLT1G1 LTR MaLR 1 594 -1 1783 222 44 17 chr17 27884129 27884604 -57553876 + MER69 DNA AcHobo 1 518 -2008 1006 109 0 0 chr17 27884663 27884800 -57553680 + AluSq/x SINE Alu 1 137 -176 1981 127 0 13 chr17 27884800 27885099 -57553381 + AluSq SINE Alu 1 295 -18 29 0 0 0 chr17 27885099 27885128 -57553352 + AT_rich Low_complexity Low_complexity 1 29 0 436 230 11 0 chr17 27885327 27885414 -57553066 - L2 LINE L2 -1 3271 3184 312 160 0 20 chr17 27885678 27885728 -57552752 - Alu SINE Alu -250 52 4 2206 92 3 0 chr17 27885754 27886046 -57552434 + AluSq SINE Alu 1 293 -20 1195 205 40 78 chr17 27886197 27886568 -57551912 + MSTD LTR MaLR 1 357 -39 642 243 10 15 chr17 27886660 27886866 -57551614 - L1ME LINE L1 -703 5463 5259 456 196 45 9 chr17 27886912 27887024 -57551456 - L1ME LINE L1 -885 5261 5146 21 57 0 0 chr17 27887040 27887075 -57551405 + AT_rich Low_complexity Low_complexity 1 35 0 2810 156 17 125 chr17 27887097 27887271 -57551209 - LTR34 LTR ERV1 -2 697 506 2224 88 3 0 chr17 27887271 27887565 -57550915 + AluSp SINE Alu 1 295 -18 2810 156 17 125 chr17 27887565 27888172 -57550308 - LTR34 LTR ERV1 -193 506 1 383 176 0 0 chr17 27888484 27888552 -57549928 + AluJ/FLAM SINE Alu 1 68 -234 1511 147 32 29 chr17 27888584 27888883 -57549597 + AluJb SINE Alu 3 302 0 267 178 0 22 chr17 27889103 27889148 -57549332 + Alu SINE Alu 1 44 -258 653 262 41 22 chr17 27889222 27889493 -57548987 + L1M4 LINE L1 4204 4479 -1667 1901 146 3 3 chr17 27890306 27890607 -57547873 - AluJb SINE Alu -11 301 1 277 186 29 0 chr17 27890637 27890699 -57547781 - MER69 DNA AcHobo -6 2520 2454 1649 164 41 0 chr17 27890699 27890992 -57547488 - AluJb SINE Alu -7 305 1 228 234 78 13 chr17 27891186 27891263 -57547217 - L2 LINE L2 -21 3251 3170 831 232 0 0 chr17 27891365 27891529 -57546951 + MIR SINE MIR 79 242 -20 189 213 0 0 chr17 27891673 27891720 -57546760 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 383 41 13 chr17 27891835 27892151 -57546329 - L2 LINE L2 -424 2890 2566 2053 117 0 3 chr17 27892363 27892662 -57545818 - AluSq SINE Alu -15 298 1 947 111 0 7 chr17 27892772 27892907 -57545573 + AluJb SINE Alu 1 134 -178 1412 182 78 4 chr17 27893374 27893737 -57544743 + AluJb SINE Alu 2 302 0 241 333 30 0 chr17 27893865 27893964 -57544516 - MER113 DNA MER1_type? -417 104 3 269 176 14 68 chr17 27893967 27894041 -57544439 - MIR3 SINE MIR -49 159 90 1174 223 56 75 chr17 27894047 27894514 -57543966 - MLT1J LTR MaLR 0 511 54 636 162 45 78 chr17 27894514 27894583 -57543897 - MER69 DNA AcHobo -3 2523 2453 2292 60 10 10 chr17 27894583 27894882 -57543598 + AluY SINE Alu 1 299 -12 636 162 45 78 chr17 27894882 27894991 -57543489 - MER69 DNA AcHobo -73 2453 2351 189 0 0 0 chr17 27895467 27895488 -57542992 + (TA)n Simple_repeat Simple_repeat 1 21 0 577 103 0 0 chr17 27895488 27895566 -57542914 - AluJ/FLAM SINE Alu -232 80 3 40 67 0 0 chr17 27895807 27895882 -57542598 + AT_rich Low_complexity Low_complexity 1 75 0 2326 80 0 3 chr17 27896790 27897092 -57541388 - AluY SINE Alu -6 305 5 2046 103 10 0 chr17 27897246 27897538 -57540942 - AluSg SINE Alu -15 295 1 604 161 11 0 chr17 27897617 27897710 -57540770 - FLAM_C SINE Alu -24 119 26 2017 141 0 0 chr17 27897735 27898032 -57540448 + AluSx SINE Alu 1 297 -15 1418 108 126 83 chr17 27898037 27898314 -57540166 + AluSx SINE Alu 1 289 -23 2160 62 3 49 chr17 27898322 27898659 -57539821 + AluY SINE Alu 1 311 0 546 226 62 14 chr17 27898735 27898881 -57539599 - L2 LINE L2 0 3313 3161 296 258 97 32 chr17 27898924 27899048 -57539432 - L2 LINE L2 -444 2870 2739 1726 170 0 3 chr17 27899057 27899346 -57539134 - AluJo SINE Alu -24 288 1 254 158 0 0 chr17 27899404 27899442 -57539038 + LTR56 LTR ERV1 352 389 -56 23 0 0 0 chr17 27899442 27899465 -57539015 + AT_rich Low_complexity Low_complexity 1 23 0 186 373 93 8 chr17 27899465 27899583 -57538897 - L2 LINE L2 -615 2699 2572 1821 151 0 10 chr17 27899773 27900064 -57538416 - AluSx SINE Alu -24 288 1 1738 161 0 20 chr17 27900076 27900374 -57538106 - AluJo SINE Alu -20 292 1 834 168 0 7 chr17 27900376 27900513 -57537967 - AluJo SINE Alu -176 136 1 1948 101 40 0 chr17 27900534 27900810 -57537670 - AluSx SINE Alu -22 290 4 374 130 0 14 chr17 27900812 27900881 -57537599 + Alu SINE Alu 233 300 0 205 191 0 0 chr17 27901014 27901056 -57537424 + A-rich Low_complexity Low_complexity 2 43 0 29 0 0 0 chr17 27902482 27902511 -57535969 + GC_rich Low_complexity Low_complexity 1 29 0 440 62 0 15 chr17 27902577 27902642 -57535838 + (CGG)n Simple_repeat Simple_repeat 2 65 0 222 237 175 93 chr17 27902792 27902889 -57535591 - MIR3 SINE MIR -44 164 60 184 309 29 0 chr17 27902889 27902957 -57535523 + L2 LINE L2 3182 3251 -62 672 286 44 36 chr17 27903571 27903819 -57534661 + MIR SINE MIR 13 262 0 2305 27 0 44 chr17 27903860 27904179 -57534301 - AluY SINE Alu 0 306 1 374 322 103 35 chr17 27904489 27904663 -57533817 - MIR3 SINE MIR 0 208 23 333 320 78 0 chr17 27904636 27904764 -57533716 + MIR SINE MIR 64 201 -61 * 1589 168 20 3 chr17 27905151 27905448 -57533032 + AluJo SINE Alu 1 302 -10 2248 96 0 0 chr17 27905456 27905749 -57532731 + AluSx SINE Alu 1 293 -19 1150 171 49 68 chr17 27906067 27906165 -57532315 + AluJo SINE Alu 45 143 -169 2077 117 0 0 chr17 27906165 27906463 -57532017 + AluSx SINE Alu 8 305 -7 1150 171 49 68 chr17 27906463 27906628 -57531852 + AluJo SINE Alu 143 303 -9 732 251 61 0 chr17 27906634 27906797 -57531683 + MIR SINE MIR 28 200 -62 2128 91 14 3 chr17 27906805 27907102 -57531378 + AluSq SINE Alu 1 300 -13 990 165 6 0 chr17 27907107 27907265 -57531215 + AluJb SINE Alu 133 291 -21 230 116 23 0 chr17 27907265 27907308 -57531172 + (TA)n Simple_repeat Simple_repeat 1 44 0 380 273 0 40 chr17 27907308 27907407 -57531073 + L1MC4 LINE L1 6609 6703 -1339 * 394 264 23 0 chr17 27907338 27907425 -57531055 - L1MC4 LINE L1 -1340 6702 6614 228 246 0 33 chr17 27907425 27907486 -57530994 + MIR SINE MIR 196 254 -8 508 260 118 44 chr17 27908720 27908924 -57529556 + MIR SINE MIR 13 231 -31 8028 48 35 1 chr17 27909019 27909699 -57528781 + LTR13 LTR ERVK 1 725 -282 195 42 0 0 chr17 27909699 27909723 -57528757 + (TC)n Simple_repeat Simple_repeat 2 25 0 8028 48 35 1 chr17 27909723 27910016 -57528464 + LTR13 LTR ERVK 725 1007 0 1575 103 50 132 chr17 27910099 27910418 -57528062 - AluJb SINE Alu -16 296 4 189 147 0 0 chr17 27910437 27910471 -57528009 + (CATA)n Simple_repeat Simple_repeat 2 35 0 312 232 0 0 chr17 27910674 27910730 -57527750 - MER2 DNA MER2_type 0 345 290 * 777 238 29 0 chr17 27910713 27910885 -57527595 - MER8 DNA MER2_type -60 179 3 1201 164 25 0 chr17 27910898 27911099 -57527381 + MER7A DNA MER2_type 2 205 -141 880 200 110 41 chr17 27911064 27911292 -57527188 + MER21B LTR ERV1 599 847 -16 * 2045 151 0 0 chr17 27911292 27911590 -57526890 + AluJb SINE Alu 1 298 -14 880 200 110 41 chr17 27911590 27911606 -57526874 + MER21B LTR ERV1 847 860 -3 180 0 0 0 chr17 27911650 27911670 -57526810 + (TA)n Simple_repeat Simple_repeat 2 21 0 2092 134 10 3 chr17 27912093 27912400 -57526080 - AluSx SINE Alu -3 309 1 2293 71 39 0 chr17 27912401 27912684 -57525796 - AluSq SINE Alu -19 294 1 1767 115 108 26 chr17 27912688 27912957 -57525523 - AluSx SINE Alu -21 291 1 2072 73 0 0 chr17 27913115 27913360 -57525120 - AluSc SINE Alu -64 245 1 2316 113 3 3 chr17 27913475 27913785 -57524695 - AluSg SINE Alu 0 310 1 24 32 0 0 chr17 27914428 27914459 -57524021 + AT_rich Low_complexity Low_complexity 1 31 0 22 56 0 0 chr17 27914809 27914845 -57523635 + AT_rich Low_complexity Low_complexity 1 36 0 1278 224 138 98 chr17 27914867 27915496 -57522984 + MER21B LTR ERV1 17 675 -188 2844 187 66 61 chr17 27915496 27916219 -57522261 + LTR8A LTR ERV1 1 727 0 1278 224 138 98 chr17 27916219 27916251 -57522229 + MER21B LTR ERV1 675 704 -159 7412 162 66 63 chr17 27916251 27917798 -57520682 - MER52A LTR ERV1 0 1755 204 2192 93 0 17 chr17 27918477 27918767 -57519713 + AluSc SINE Alu 1 285 -24 236 119 0 0 chr17 27918768 27918810 -57519670 + Alu SINE Alu 259 300 -2 1374 153 63 9 chr17 27919077 27919300 -57519180 + AluJb SINE Alu 1 235 -77 1886 122 22 11 chr17 27919435 27919705 -57518775 - AluSg SINE Alu -37 273 1 188 293 86 0 chr17 27919866 27919924 -57518556 + L2 LINE L2 3143 3205 -67 453 299 108 23 chr17 27920168 27920382 -57518098 + MIR SINE MIR 20 251 -11 299 228 97 26 chr17 27920419 27920533 -57517947 + MIR SINE MIR 24 145 -63 1880 140 0 47 chr17 27920664 27920964 -57517516 + AluJb SINE Alu 1 286 -26 434 175 38 0 chr17 27921313 27921393 -57517087 - Tigger5 DNA MER2_type 0 2323 2241 1900 164 3 0 chr17 27921393 27921680 -57516800 + AluJb SINE Alu 1 288 -24 279 133 0 0 chr17 27921722 27921767 -57516713 + (A)n Simple_repeat Simple_repeat 1 45 0 2369 70 0 17 chr17 27921775 27922075 -57516405 + AluY SINE Alu 1 295 -16 1059 175 0 17 chr17 27922128 27922305 -57516175 - AluJb SINE Alu -7 305 132 2141 112 3 7 chr17 27922326 27922620 -57515860 - AluSx SINE Alu -15 297 5 2408 74 0 23 chr17 27922627 27922937 -57515543 - AluY SINE Alu -8 303 1 1205 198 115 22 chr17 27922937 27923215 -57515265 - AluJo SINE Alu -8 304 1 1797 171 3 3 chr17 27923566 27923859 -57514621 - AluJo SINE Alu -19 293 1 1920 177 7 0 chr17 27924135 27924440 -57514040 + AluJb SINE Alu 1 307 -5 328 228 40 20 chr17 27924642 27924743 -57513737 - MER50 LTR ERV1 -130 604 502 2434 82 0 3 chr17 27925330 27925636 -57512844 - AluSg SINE Alu -5 305 1 769 171 0 0 chr17 27925833 27925950 -57512530 - AluJb SINE Alu -38 274 158 225 0 0 0 chr17 27926253 27926278 -57512202 + (CAG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr17 27927163 27927186 -57511294 + AT_rich Low_complexity Low_complexity 1 23 0 1923 129 4 11 chr17 27927186 27927464 -57511016 + AluSx SINE Alu 1 276 -36 405 215 0 0 chr17 27927475 27927568 -57510912 + (TATG)n Simple_repeat Simple_repeat 4 96 0 2367 96 3 3 chr17 27927674 27927977 -57510503 - AluSq SINE Alu -2 311 9 416 133 12 60 chr17 27927977 27928060 -57510420 + MLT1F LTR MaLR 401 479 -63 6015 106 61 28 chr17 27928060 27930508 -57507972 + SVA Other Other 41 1381 -5 180 0 0 0 chr17 27930558 27930578 -57507902 + (A)n Simple_repeat Simple_repeat 1 20 0 1125 175 0 11 chr17 27930659 27930836 -57507644 - AluJo SINE Alu -128 184 10 294 329 61 24 chr17 27931219 27931383 -57507097 + L2 LINE L2 2434 2603 -711 554 150 165 8 chr17 27931454 27931587 -57506893 - L1MC5 LINE L1 -97 7864 7711 613 320 78 43 chr17 27931603 27932082 -57506398 + L2 LINE L2 2719 3221 -92 1482 170 88 32 chr17 27932082 27932365 -57506115 + AluJo SINE Alu 3 301 -11 613 320 78 43 chr17 27932365 27932458 -57506022 + L2 LINE L2 3221 3309 -4 25 0 0 0 chr17 27932550 27932575 -57505905 + AT_rich Low_complexity Low_complexity 1 25 0 2210 109 0 22 chr17 27933533 27933846 -57504634 - AluSx SINE Alu -6 306 1 2613 152 9 52 chr17 27933934 27934339 -57504141 - L1MB7 LINE L1 -16 6168 5790 2060 129 0 40 chr17 27934339 27934664 -57503816 - AluJo SINE Alu 0 312 1 2613 152 9 52 chr17 27934664 27934799 -57503681 - L1MB7 LINE L1 -394 5790 5651 909 211 7 0 chr17 27934800 27934952 -57503528 - FRAM SINE Alu -31 145 1 2204 129 3 0 chr17 27934959 27935270 -57503210 - AluSp SINE Alu -1 312 1 1826 169 3 3 chr17 27935278 27935568 -57502912 - AluJb SINE Alu -22 290 1 1887 160 3 16 chr17 27935570 27935882 -57502598 - AluJo SINE Alu -4 308 1 1694 136 49 43 chr17 27935882 27936228 -57502252 - L1MB7 LINE L1 -513 5667 5320 2288 74 0 7 chr17 27936241 27936525 -57501955 - AluY SINE Alu -29 282 1 1373 188 12 16 chr17 27936529 27936779 -57501701 - AluJo SINE Alu -20 292 44 21 0 0 0 chr17 27936819 27936840 -57501640 + AT_rich Low_complexity Low_complexity 1 21 0 583 158 67 42 chr17 27936845 27936865 -57501615 - FLAM_C SINE Alu -184 128 110 2192 127 3 0 chr17 27936865 27937165 -57501315 + AluSx SINE Alu 1 301 -11 583 158 67 42 chr17 27937165 27937264 -57501216 - FLAM_C SINE Alu -202 110 6 1444 231 55 25 chr17 27937393 27937441 -57501039 + Cheshire DNA MER1_type 37 82 -2338 2022 122 56 0 chr17 27937441 27937728 -57500752 - AluSx SINE Alu -9 303 1 1444 231 55 25 chr17 27937728 27938077 -57500403 + Cheshire DNA MER1_type 82 446 -1974 3387 161 60 2 chr17 27938092 27938705 -57499775 + Cheshire DNA MER1_type 1772 2420 0 2296 92 3 13 chr17 27938877 27939191 -57499289 + AluY SINE Alu 1 311 0 1810 121 111 4 chr17 27939585 27939865 -57498615 - AluSx SINE Alu -2 310 1 2240 117 0 0 chr17 27940032 27940331 -57498149 + AluY SINE Alu 1 299 -12 2194 110 7 0 chr17 27940660 27940952 -57497528 - AluSx SINE Alu -18 294 1 189 0 0 0 chr17 27942188 27942209 -57496271 + (T)n Simple_repeat Simple_repeat 1 21 0 2336 83 17 3 chr17 27942520 27942820 -57495660 - AluSc SINE Alu -5 304 1 733 132 9 9 chr17 27944001 27944115 -57494365 - FLAM_C SINE Alu -17 126 13 916 173 147 0 chr17 27944242 27944433 -57494047 - MER20 DNA MER1_type 0 219 1 2352 92 10 0 chr17 27944674 27944980 -57493500 - AluY SINE Alu -2 309 1 1115 190 107 76 chr17 27944980 27945269 -57493211 - AluJo SINE Alu -4 298 1 1716 177 0 32 chr17 27946037 27946347 -57492133 - AluJo SINE Alu -12 300 1 266 286 105 52 chr17 27946390 27946638 -57491842 + L2 LINE L2 2831 3091 -181 1717 81 5 9 chr17 27946697 27946919 -57491561 + AluSg SINE Alu 1 221 -89 999 53 0 0 chr17 27947455 27947568 -57490912 - AluY SINE Alu -197 114 2 976 188 20 5 chr17 27947669 27947866 -57490614 + MER3 DNA MER1_type 6 205 -4 1816 160 11 4 chr17 27948171 27948499 -57489981 + AluSx SINE Alu 1 330 0 440 219 20 62 chr17 27948661 27948807 -57489673 + L1MC4 LINE L1 7903 8042 0 1464 165 4 20 chr17 27949339 27949588 -57488892 + AluSx SINE Alu 54 298 -14 1286 162 61 4 chr17 27950621 27950899 -57487581 - MER33 DNA MER1_type 0 324 31 1464 124 34 21 chr17 27951298 27951309 -57487171 + MER46A DNA MER2_type 1 10 -2721 2066 113 11 0 chr17 27951309 27951593 -57486887 - AluSg SINE Alu -8 302 16 1464 124 34 21 chr17 27951593 27951814 -57486666 + MER46A DNA MER2_type 10 236 0 2228 93 10 0 chr17 27952201 27952491 -57485989 - AluSq SINE Alu -20 293 1 23 0 0 0 chr17 27952530 27952553 -57485927 + AT_rich Low_complexity Low_complexity 1 23 0 180 216 0 0 chr17 27953168 27953205 -57485275 - MIR SINE MIR -70 192 156 223 118 0 0 chr17 27953481 27953515 -57484965 - MIR SINE MIR -119 143 110 1001 193 0 0 chr17 27953652 27953823 -57484657 + FRAM SINE Alu 1 166 -10 27 49 0 0 chr17 27953881 27953922 -57484558 + AT_rich Low_complexity Low_complexity 1 41 0 694 181 84 0 chr17 27954408 27954563 -57483917 + L1MB4 LINE L1 6007 6174 -6 2240 117 0 10 chr17 27954602 27954909 -57483571 - AluSx SINE Alu -8 304 1 429 343 98 0 chr17 27954915 27955017 -57483463 - L1ME LINE L1 -297 5824 5733 1750 166 0 27 chr17 27955017 27955318 -57483162 - AluJb SINE Alu -19 293 1 429 343 98 0 chr17 27955318 27955512 -57482968 - L1ME LINE L1 -388 5733 5499 249 282 77 17 chr17 27956168 27956285 -57482195 - MIR SINE MIR -66 142 19 270 167 36 0 chr17 27956385 27956469 -57482011 + (TA)n Simple_repeat Simple_repeat 2 88 0 1658 178 3 24 chr17 27956473 27956766 -57481714 + AluJo SINE Alu 6 292 -20 180 77 0 0 chr17 27956774 27956800 -57481680 + (TG)n Simple_repeat Simple_repeat 1 26 0 1252 90 34 17 chr17 27956811 27956989 -57481491 - Tigger1 DNA MER2_type -1006 1412 1232 1503 206 14 0 chr17 27956989 27957266 -57481214 - AluJo SINE Alu -8 304 24 9038 95 40 62 chr17 27957271 27957528 -57480952 + Tigger1 DNA MER2_type 965 1226 -1192 1556 65 5 0 chr17 27957528 27957713 -57480767 + AluY SINE Alu 112 297 -14 9038 95 40 62 chr17 27957713 27958837 -57479643 + Tigger1 DNA MER2_type 1226 2314 -104 1969 156 0 10 chr17 27958837 27959139 -57479341 - AluSx SINE Alu -13 299 1 9038 95 40 62 chr17 27959139 27959242 -57479238 + Tigger1 DNA MER2_type 2314 2418 0 1166 149 0 0 chr17 27959506 27959674 -57478806 - AluSx SINE Alu -17 295 128 2515 67 10 0 chr17 27959680 27959979 -57478501 - AluY SINE Alu -5 306 5 232 82 20 20 chr17 27959990 27960039 -57478441 + (TTTTG)n Simple_repeat Simple_repeat 4 52 0 910 123 0 0 chr17 27960043 27960165 -57478315 - AluSx SINE Alu -190 122 1 1767 153 11 11 chr17 27960167 27960448 -57478032 - AluJb SINE Alu -21 291 11 2007 136 4 0 chr17 27960817 27961096 -57477384 + AluSx SINE Alu 1 280 -32 1208 161 109 5 chr17 27961271 27961482 -57476998 - MER46A DNA MER2_type -1 235 3 421 246 89 59 chr17 27961586 27961822 -57476658 - MIR SINE MIR 0 262 20 1066 165 0 0 chr17 27962199 27962357 -57476123 + FRAM SINE Alu 1 151 -25 1972 103 34 17 chr17 27962386 27962678 -57475802 + AluSc SINE Alu 1 297 -12 2468 66 0 10 chr17 27963301 27963606 -57474874 - AluY SINE Alu -9 302 1 1949 180 45 3 chr17 27963631 27963965 -57474515 - MER7A DNA MER2_type 0 346 1 3413 177 105 11 chr17 27964175 27964920 -57473560 - L1MC3 LINE L1 0 7785 6971 21 0 0 0 chr17 27965080 27965101 -57473379 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 27965660 27965688 -57472792 + AT_rich Low_complexity Low_complexity 1 28 0 2280 91 0 0 chr17 27967957 27968243 -57470237 + AluY SINE Alu 17 302 -9 763 213 0 0 chr17 27968243 27968365 -57470115 - AluJb SINE Alu -189 123 2 2100 142 0 10 chr17 27968634 27968944 -57469536 - AluSx SINE Alu -5 307 1 22 80 0 0 chr17 27969204 27969254 -57469226 + AT_rich Low_complexity Low_complexity 1 50 0 26 0 0 0 chr17 27969409 27969435 -57469045 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr17 27969679 27969702 -57468778 + AT_rich Low_complexity Low_complexity 1 23 0 1935 138 0 14 chr17 27969706 27969989 -57468491 - AluSx SINE Alu -30 282 4 1865 147 20 3 chr17 27970100 27970392 -57468088 - AluSx SINE Alu -15 297 1 754 167 0 0 chr17 27971201 27971321 -57467159 - AluSp/q SINE Alu -4 309 190 205 222 10 172 chr17 27971880 27971979 -57466501 + MIR SINE MIR 25 107 -101 370 103 52 0 chr17 27972228 27972286 -57466194 - L1MA1 LINE L1 -4 6298 6238 1563 161 30 39 chr17 27972605 27972910 -57465570 + AluSx SINE Alu 7 308 -4 1954 116 17 7 chr17 27973319 27973611 -57464869 + AluSq SINE Alu 1 295 -18 2375 93 0 3 chr17 27973614 27973926 -57464554 + AluY SINE Alu 1 311 0 1970 132 14 3 chr17 27974018 27974314 -57464166 - AluSq SINE Alu -14 299 1 2043 126 18 0 chr17 27974424 27974710 -57463770 + AluSx SINE Alu 1 291 -21 865 126 7 15 chr17 27974961 27975096 -57463384 - AluJo SINE Alu -178 134 1 1686 185 7 3 chr17 27975279 27975582 -57462898 + AluJb SINE Alu 1 304 -8 1856 129 0 4 chr17 27975661 27975924 -57462556 + AluSx SINE Alu 1 262 -50 918 97 0 8 chr17 27975924 27976048 -57462432 + AluY SINE Alu 10 132 -179 2231 90 0 47 chr17 27976055 27976376 -57462104 + AluY SINE Alu 3 308 -3 2290 85 0 52 chr17 27976421 27976749 -57461731 + AluY SINE Alu 1 311 0 358 232 20 50 chr17 27976782 27976881 -57461599 + MER46C DNA MER2_type 25 120 -218 1670 133 21 107 chr17 27977112 27977250 -57461230 + AluYb8 SINE Alu 1 149 -169 2138 91 17 10 chr17 27977250 27977546 -57460934 - AluY SINE Alu -13 298 1 1670 133 21 107 chr17 27977546 27977745 -57460735 + AluYb8 SINE Alu 149 309 -9 616 287 81 39 chr17 27978136 27978384 -57460096 - MER102a DNA MER1_type -1097 320 55 2184 102 0 26 chr17 27978384 27978687 -57459793 - AluSq SINE Alu -18 295 1 616 287 81 39 chr17 27978687 27978745 -57459735 - MER102a DNA MER1_type -1362 55 1 516 285 65 31 chr17 27978915 27979206 -57459274 + L2 LINE L2 2187 2487 -827 2119 92 7 4 chr17 27979483 27979798 -57458682 + AluSg SINE Alu 1 316 0 207 0 0 0 chr17 27979993 27980016 -57458464 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1669 141 98 4 chr17 27980101 27980377 -57458103 + AluSx SINE Alu 1 302 -10 2313 113 0 0 chr17 27980383 27980693 -57457787 + AluSg SINE Alu 1 310 0 234 266 38 13 chr17 27980802 27980881 -57457599 - L1ME4a LINE L1 -52 6069 5989 274 305 102 53 chr17 27980976 27981158 -57457322 - L1ME4a LINE L1 -481 5640 5468 1875 157 3 13 chr17 27981158 27981463 -57457017 - AluSx SINE Alu -10 302 1 274 305 102 53 chr17 27981463 27981713 -57456767 - L1ME4a LINE L1 -653 5468 5290 706 179 232 21 chr17 27982552 27982742 -57455738 - MIR SINE MIR -3 259 30 2179 107 0 16 chr17 27982758 27983067 -57455413 + AluSg SINE Alu 1 304 -6 2136 113 3 10 chr17 27983654 27983955 -57454525 - AluSg SINE Alu -11 299 1 203 147 29 0 chr17 27984132 27984166 -57454314 + L2 LINE L2 3264 3298 -15 848 229 88 9 chr17 27984385 27984612 -57453868 - MIR SINE MIR 0 262 18 241 226 0 0 chr17 27984773 27984826 -57453654 - L1MC/D LINE L1 -1977 5831 5779 640 249 127 0 chr17 27984853 27985074 -57453406 - L1MC/D LINE L1 -2265 5543 5295 918 189 44 6 chr17 27985286 27985445 -57453035 - AluJo SINE Alu -1 301 137 2216 216 109 110 chr17 27985474 27985582 -57452898 + L1MC4 LINE L1 6761 6868 -1174 2318 89 7 0 chr17 27985582 27985886 -57452594 + AluSp SINE Alu 1 306 -7 2216 216 109 110 chr17 27985886 27986142 -57452338 + L1MC4 LINE L1 6868 7123 -919 857 194 0 0 chr17 27986142 27986271 -57452209 - AluJo SINE Alu -170 132 4 261 0 0 0 chr17 27986277 27986306 -57452174 + (TC)n Simple_repeat Simple_repeat 2 30 0 2216 216 109 110 chr17 27986306 27987193 -57451287 + L1MC4 LINE L1 7128 8021 -21 2571 59 7 0 chr17 27987193 27987498 -57450982 - AluSc SINE Alu 0 309 3 2216 216 109 110 chr17 27987498 27987517 -57450963 + L1MC4 LINE L1 8021 8039 -3 2133 103 7 0 chr17 27987819 27988134 -57450346 + AluSx SINE Alu 1 317 0 2319 93 0 3 chr17 27988416 27988717 -57449763 - AluSg SINE Alu -10 300 1 2047 120 3 7 chr17 27988753 27989052 -57449428 + AluY SINE Alu 6 303 -8 867 215 0 0 chr17 27989052 27989196 -57449284 - FRAM SINE Alu -32 144 1 671 260 242 11 chr17 27989227 27989504 -57448976 + L2 LINE L2 2973 3313 0 209 221 42 147 chr17 27990191 27990286 -57448194 + L2 LINE L2 3133 3217 -55 22 35 0 0 chr17 27990853 27990882 -57447598 + AT_rich Low_complexity Low_complexity 1 29 0 1920 84 28 4 chr17 27991819 27992068 -57446412 - AluY SINE Alu -55 256 2 1744 144 65 0 chr17 27992098 27992376 -57446104 - AluJb SINE Alu -16 296 1 28 0 0 0 chr17 27993190 27993218 -57445262 + AT_rich Low_complexity Low_complexity 1 28 0 822 204 0 54 chr17 27993414 27993581 -57444899 - FRAM SINE Alu -17 159 2 1707 170 10 14 chr17 27993606 27993894 -57444586 + AluJo SINE Alu 1 287 -25 382 287 0 43 chr17 27993923 27994026 -57444454 + L1MC4 LINE L1 6614 6713 -1329 1996 142 0 3 chr17 27994026 27994314 -57444166 - AluSx SINE Alu -25 287 1 382 287 0 43 chr17 27994314 27994325 -57444155 + L1MC4 LINE L1 6713 6723 -1319 777 176 15 8 chr17 27994350 27994481 -57443999 - FLAM_A SINE Alu -1 132 1 2169 107 13 19 chr17 27994586 27994895 -57443585 + AluSp SINE Alu 1 307 -6 1024 149 0 44 chr17 27995490 27995671 -57442809 - AluSg/x SINE Alu -6 306 134 1893 157 7 0 chr17 27995671 27995970 -57442510 - AluSx SINE Alu -11 301 1 832 200 40 34 chr17 27996234 27996409 -57442071 + AluSg/x SINE Alu 135 310 0 702 227 0 0 chr17 27996430 27996562 -57441918 - FLAM_A SINE Alu 0 133 2 1605 151 4 37 chr17 27996726 27996864 -57441616 + AluSx SINE Alu 6 132 -180 2238 91 0 23 chr17 27996864 27997173 -57441307 + AluSp SINE Alu 1 302 -11 1605 151 4 37 chr17 27997173 27997306 -57441174 + AluSx SINE Alu 132 268 -44 1578 134 87 32 chr17 27997784 27998061 -57440419 + AluJo SINE Alu 1 292 -20 1270 185 54 64 chr17 27998133 27998431 -57440049 - AluJo SINE Alu -17 295 1 1476 198 51 0 chr17 27998443 27998716 -57439764 - AluJo SINE Alu -23 289 3 404 111 0 16 chr17 27998721 27998784 -57439696 - AluSc SINE Alu -11 298 237 1269 80 6 6 chr17 27998786 27998949 -57439531 - AluY SINE Alu -148 163 1 2037 122 3 59 chr17 27999095 27999415 -57439065 - AluSg SINE Alu -8 302 1 1740 91 53 4 chr17 27999682 27999925 -57438555 + AluSg SINE Alu 1 255 -55 25 0 0 0 chr17 28001149 28001174 -57437306 + AT_rich Low_complexity Low_complexity 1 25 0 1213 117 0 0 chr17 28001321 28001483 -57436997 - AluSp SINE Alu -16 297 136 2220 103 3 0 chr17 28001614 28001905 -57436575 + AluSg SINE Alu 1 292 -18 2054 136 0 3 chr17 28001994 28002302 -57436178 + AluSc SINE Alu 1 307 -2 513 113 125 0 chr17 28002385 28002465 -57436015 + 5S rRNA rRNA 1 90 -31 2143 72 3 84 chr17 28002496 28002828 -57435652 + AluSg SINE Alu 1 305 -5 1981 90 13 57 chr17 28002860 28003160 -57435320 + AluY SINE Alu 1 287 -24 209 286 61 0 chr17 28003607 28003656 -57434824 + MIR SINE MIR 34 85 -177 1790 174 3 3 chr17 28003712 28004010 -57434470 - AluJb SINE Alu -14 298 1 939 144 0 0 chr17 28004033 28004165 -57434315 - FLAM_C SINE Alu -1 132 1 235 196 18 0 chr17 28004647 28004703 -57433777 + MER5C DNA MER1_type 261 317 -7 1973 125 27 0 chr17 28004754 28005051 -57433429 - AluSx SINE Alu -7 305 1 1948 128 7 10 chr17 28005092 28005388 -57433092 - AluSx SINE Alu -15 297 3 2012 117 27 7 chr17 28005442 28005742 -57432738 + AluSx SINE Alu 1 306 -6 2352 86 0 0 chr17 28005807 28006098 -57432382 + AluSg SINE Alu 1 291 -19 1264 111 0 0 chr17 28007277 28007448 -57431032 - AluSg/x SINE Alu -9 303 133 2210 119 3 0 chr17 28007449 28007752 -57430728 - AluSx SINE Alu -8 304 1 1206 126 0 0 chr17 28007848 28008022 -57430458 + AluSg/x SINE Alu 132 305 -5 426 206 122 38 chr17 28008059 28008190 -57430290 + HAL1 LINE L1 1499 1640 -867 871 147 7 0 chr17 28008192 28008328 -57430152 + FAM SINE Alu 36 172 -13 1546 202 128 73 chr17 28008328 28008763 -57429717 + HAL1 LINE L1 1633 2043 -464 2058 106 34 0 chr17 28008763 28009056 -57429424 + AluSq SINE Alu 1 303 -10 1546 202 128 73 chr17 28009056 28009096 -57429384 + HAL1 LINE L1 2043 2079 -428 2351 85 3 3 chr17 28009096 28009402 -57429078 - AluSp SINE Alu -6 307 2 1546 202 128 73 chr17 28009402 28009510 -57428970 + HAL1 LINE L1 2079 2249 -258 1854 132 30 0 chr17 28010765 28011061 -57427419 + AluSx SINE Alu 5 309 -3 459 256 86 69 chr17 28011098 28011308 -57427172 + MIR SINE MIR 47 253 -9 2147 98 3 14 chr17 28011911 28012207 -57426273 + AluSp SINE Alu 1 293 -20 1980 128 0 0 chr17 28012218 28012521 -57425959 + AluSc SINE Alu 1 303 0 2020 100 17 0 chr17 28012640 28012929 -57425551 - AluSq SINE Alu -19 294 1 793 253 94 26 chr17 28012933 28013316 -57425164 - L1MC4a LINE L1 -137 5984 5576 2237 90 0 0 chr17 28013631 28013930 -57424550 - AluSg SINE Alu -11 299 1 2446 70 3 0 chr17 28014048 28014360 -57424120 + AluSp SINE Alu 1 313 0 1514 127 0 0 chr17 28015364 28015592 -57422888 + AluSg/x SINE Alu 82 309 -1 1788 137 38 0 chr17 28015618 28015911 -57422569 + AluSx SINE Alu 9 312 0 2170 84 7 3 chr17 28016002 28016300 -57422180 + AluSq SINE Alu 1 299 -14 2156 83 35 0 chr17 28016300 28016588 -57421892 + AluY SINE Alu 1 298 -13 3072 222 73 47 chr17 28016596 28017008 -57421472 - L2 LINE L2 -103 3210 2810 2048 103 20 0 chr17 28017008 28017300 -57421180 - AluSp SINE Alu -15 298 1 3072 222 73 47 chr17 28017300 28017850 -57420630 - L2 LINE L2 -503 2810 2215 1120 137 13 97 chr17 28017850 28017938 -57420542 - MER3 DNA MER1_type -2 207 113 2192 99 0 16 chr17 28017938 28018241 -57420239 + AluSx SINE Alu 1 298 -14 1120 137 13 97 chr17 28018241 28018378 -57420102 - MER3 DNA MER1_type -96 113 1 3072 222 73 47 chr17 28018378 28018466 -57420014 - L2 LINE L2 -1098 2215 2131 25 0 0 0 chr17 28018537 28018562 -57419918 + AT_rich Low_complexity Low_complexity 1 25 0 259 327 82 9 chr17 28018579 28018689 -57419791 - L2 LINE L2 -289 2983 2866 258 56 0 0 chr17 28018710 28018746 -57419734 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr17 28020283 28020304 -57418176 + AT_rich Low_complexity Low_complexity 1 21 0 1800 130 0 46 chr17 28020517 28020824 -57417656 - AluSx SINE Alu -19 293 1 388 164 17 2 chr17 28020898 28020983 -57417497 - AluS SINE Alu 0 300 228 198 168 50 178 chr17 28021008 28021062 -57417418 + MIR SINE MIR 160 197 -65 2272 102 0 0 chr17 28021062 28021367 -57417113 + AluSq SINE Alu 1 305 -8 198 168 50 178 chr17 28021367 28021413 -57417067 + MIR SINE MIR 197 247 -15 813 128 0 23 chr17 28021435 28021568 -57416912 - AluSg SINE Alu -179 131 2 851 135 0 0 chr17 28021633 28021759 -57416721 - AluSg/x SINE Alu -16 296 171 1593 127 32 0 chr17 28021759 28022011 -57416469 - AluSx SINE Alu -15 297 38 2269 78 0 3 chr17 28022022 28022316 -57416164 - AluSg SINE Alu -17 293 1 1816 94 29 14 chr17 28022352 28022660 -57415820 + AluSg SINE Alu 1 312 0 2321 81 0 0 chr17 28022686 28022982 -57415498 + AluSq SINE Alu 1 296 -17 604 197 23 38 chr17 28023008 28023140 -57415340 + AluJo/FLAM SINE Alu 2 131 -171 1176 159 0 27 chr17 28023141 28023361 -57415119 + AluJo SINE Alu 84 297 -15 729 94 125 23 chr17 28023364 28023492 -57414988 + AluSg/x SINE Alu 130 270 -40 963 105 7 13 chr17 28023492 28023644 -57414836 - AluSq/x SINE Alu -161 151 1 180 0 0 0 chr17 28023669 28023689 -57414791 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 1898 129 0 0 chr17 28023732 28024043 -57414437 + AluSc SINE Alu 1 311 0 358 250 86 26 chr17 28024158 28024274 -57414206 - L2 LINE L2 -2 3311 3189 1970 71 60 7 chr17 28024907 28025196 -57413284 - AluSq SINE Alu 0 303 1 270 241 72 60 chr17 28026225 28026308 -57412172 + L2 LINE L2 3208 3291 -22 21 0 0 0 chr17 28026681 28026702 -57411778 + AT_rich Low_complexity Low_complexity 1 21 0 2220 69 31 0 chr17 28026742 28027032 -57411448 + AluSg SINE Alu 1 299 -11 2161 103 0 0 chr17 28027178 28027468 -57411012 - AluSc SINE Alu -19 290 1 1499 162 63 36 chr17 28027705 28028007 -57410473 - AluSg SINE Alu 0 310 1 1204 161 186 16 chr17 28028028 28028276 -57410204 - AluJb SINE Alu -12 290 1 1678 152 30 17 chr17 28028280 28028577 -57409903 - AluSx SINE Alu -11 301 1 183 80 0 0 chr17 28028605 28028630 -57409850 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 637 93 0 56 chr17 28028634 28028741 -57409739 - AluSg/x SINE Alu -36 276 176 2080 81 42 0 chr17 28028792 28029077 -57409403 - AluSq SINE Alu -16 297 1 328 296 266 39 chr17 28029238 28029584 -57408896 + L3 LINE CR1 366 632 -945 2207 88 7 7 chr17 28029584 28029889 -57408591 + AluSq SINE Alu 1 305 -8 328 296 266 39 chr17 28029889 28030035 -57408445 + L3 LINE CR1 632 970 -607 1522 152 35 21 chr17 28030039 28030329 -57408151 - AluJo SINE Alu -18 294 1 1601 132 21 0 chr17 28030445 28030688 -57407792 + AluJb SINE Alu 49 296 -16 287 210 90 18 chr17 28030704 28030946 -57407534 + L1M4 LINE L1 5175 5429 -806 2155 114 0 0 chr17 28030956 28031255 -57407225 + AluSx SINE Alu 1 299 -13 244 286 0 0 chr17 28032234 28032297 -57406183 - MARNA DNA Mariner -102 484 422 1819 163 0 0 chr17 28032491 28032785 -57405695 - AluSx SINE Alu -1 311 18 2011 115 7 16 chr17 28033033 28033337 -57405143 - AluSx SINE Alu -11 301 1 1920 129 0 29 chr17 28033337 28033510 -57404970 - AluSx SINE Alu -11 301 139 1500 116 68 8 chr17 28033510 28033760 -57404720 - AluSq SINE Alu -10 303 39 1920 129 0 29 chr17 28033760 28033896 -57404584 - AluSx SINE Alu -173 139 1 191 235 0 0 chr17 28034692 28034726 -57403754 - L2 LINE L2 -30 3283 3250 2215 81 0 7 chr17 28034750 28035046 -57403434 - AluSg SINE Alu -16 294 1 1963 137 0 7 chr17 28035776 28036076 -57402404 - AluSx SINE Alu -7 305 8 1905 136 0 7 chr17 28036159 28036453 -57402027 - AluSx SINE Alu -20 292 1 1493 167 60 4 chr17 28036491 28036772 -57401708 + AluJb SINE Alu 1 297 -15 2429 53 7 7 chr17 28036989 28037291 -57401189 + AluY SINE Alu 1 302 -9 898 113 0 15 chr17 28037571 28037704 -57400776 - AluSq SINE Alu -102 211 81 2135 86 7 3 chr17 28037706 28037997 -57400483 - AluY SINE Alu -19 292 1 1793 132 50 0 chr17 28038079 28038360 -57400120 - AluSx SINE Alu -17 295 1 2165 110 3 0 chr17 28038799 28039107 -57399373 - AluSq SINE Alu -4 309 1 1461 187 14 21 chr17 28039137 28039426 -57399054 + AluJo SINE Alu 3 289 -23 783 83 9 0 chr17 28039639 28039748 -57398732 - AluSg/x SINE Alu -5 305 196 21 0 0 0 chr17 28040009 28040030 -57398450 + AT_rich Low_complexity Low_complexity 1 21 0 2084 103 0 3 chr17 28040113 28040405 -57398075 - AluSq SINE Alu -22 291 1 305 252 104 17 chr17 28040531 28040646 -57397834 - MIR3 SINE MIR -11 197 73 2038 121 0 0 chr17 28040989 28041278 -57397202 - AluSg SINE Alu -20 290 2 623 88 239 2 chr17 28041327 28041342 -57397138 - L1PB1 LINE L1 -7 6144 6134 2011 93 57 0 chr17 28041342 28041621 -57396859 + AluSx SINE Alu 1 295 -17 623 88 239 2 chr17 28041621 28041727 -57396753 - L1PB1 LINE L1 -17 6134 6011 1566 183 29 0 chr17 28041731 28042010 -57396470 - AluJb SINE Alu -20 292 6 2153 102 7 0 chr17 28042489 28042784 -57395696 + AluSx SINE Alu 1 297 -15 1517 187 28 3 chr17 28042817 28043101 -57395379 + AluJb SINE Alu 1 291 -21 2210 97 3 0 chr17 28043172 28043470 -57395010 + AluSp SINE Alu 1 299 -14 844 174 0 14 chr17 28043591 28043735 -57394745 - FLAM_C SINE Alu -1 142 1 1255 157 5 14 chr17 28043785 28044001 -57394479 + AluJb SINE Alu 87 300 -12 2092 106 3 7 chr17 28044166 28044459 -57394021 + AluSc SINE Alu 1 292 -17 2101 97 0 0 chr17 28044464 28044742 -57393738 + AluSq SINE Alu 9 286 -27 228 35 0 0 chr17 28044742 28044771 -57393709 + (CA)n Simple_repeat Simple_repeat 2 30 0 1390 142 95 15 chr17 28044809 28045083 -57393397 + AluJb SINE Alu 1 296 -16 1835 151 10 19 chr17 28045215 28045527 -57392953 + AluSx SINE Alu 1 309 -3 1948 116 17 7 chr17 28045602 28045895 -57392585 - AluSx SINE Alu -16 296 1 1912 126 0 29 chr17 28046345 28046655 -57391825 - AluSx SINE Alu -9 303 3 2192 114 0 0 chr17 28046656 28046963 -57391517 - AluSx SINE Alu -5 307 1 1578 160 0 7 chr17 28047106 28047375 -57391105 - AluJb SINE Alu -21 291 25 1948 133 0 0 chr17 28047392 28047671 -57390809 - AluSx SINE Alu -25 287 9 2084 120 3 0 chr17 28048802 28049101 -57389379 - AluSx SINE Alu -12 300 1 936 133 0 0 chr17 28049102 28049237 -57389243 - AluSq/x SINE Alu -178 135 1 254 204 272 29 chr17 28049330 28049433 -57389047 + L2 LINE L2 3179 3306 -7 228 349 27 23 chr17 28049469 28049730 -57388750 - L1ME LINE L1 -369 5752 5491 1984 141 0 13 chr17 28049744 28050057 -57388423 - AluSx SINE Alu -3 309 1 2290 93 3 0 chr17 28050113 28050424 -57388056 - AluSp SINE Alu -1 312 1 2121 102 6 13 chr17 28050451 28050764 -57387716 + AluSq SINE Alu 2 312 -1 2104 118 7 3 chr17 28050939 28051244 -57387236 - AluSc SINE Alu -3 306 1 2090 113 3 3 chr17 28051837 28052137 -57386343 - AluSx SINE Alu -12 300 1 1937 141 3 0 chr17 28052226 28052517 -57385963 - AluSx SINE Alu -15 297 6 376 71 18 0 chr17 28052942 28052998 -57385482 - L1MA4A LINE L1 -11 6292 6236 2029 120 3 13 chr17 28053518 28053818 -57384662 - AluSx SINE Alu -15 297 1 198 118 0 0 chr17 28053833 28053867 -57384613 + (T)n Simple_repeat Simple_repeat 1 34 0 1215 148 20 0 chr17 28053872 28054068 -57384412 - AluSx SINE Alu -112 200 1 1549 199 0 26 chr17 28054095 28054401 -57384079 - AluJo SINE Alu -14 298 1 2110 104 0 3 chr17 28054577 28054875 -57383605 - AluSx SINE Alu -15 297 1 1786 160 7 0 chr17 28054881 28055174 -57383306 - AluSx SINE Alu -16 296 2 685 241 0 7 chr17 28055175 28055320 -57383160 - AluJo SINE Alu -167 145 2 1260 239 0 17 chr17 28055363 28055495 -57382985 + AluJo SINE Alu 1 134 -178 2416 59 0 10 chr17 28055495 28055799 -57382681 + AluY SINE Alu 1 301 -10 1260 239 0 17 chr17 28055799 28055963 -57382517 + AluJo SINE Alu 134 292 -20 2385 77 0 6 chr17 28055966 28056277 -57382203 + AluY SINE Alu 3 311 0 1191 256 89 20 chr17 28056280 28056783 -57381697 + L1ME3A LINE L1 5289 5826 -344 * 4615 148 25 10 chr17 28056335 28057124 -57381356 + L1PA16 LINE L1 5366 6166 0 1071 165 0 0 chr17 28057138 28057302 -57381178 + FRAM SINE Alu 1 164 -2 1561 169 10 41 chr17 28057308 28057622 -57380858 + AluJo SINE Alu 1 304 -8 2043 117 10 0 chr17 28057664 28057955 -57380525 - AluSx SINE Alu -18 294 1 373 209 28 34 chr17 28057972 28058075 -57380405 - L1M4 LINE L1 -407 5714 5624 1882 164 0 3 chr17 28058158 28058469 -57380011 + AluJo SINE Alu 3 312 0 2209 99 0 3 chr17 28058808 28059111 -57379369 - AluSc SINE Alu -7 302 1 2085 114 0 0 chr17 28059263 28059560 -57378920 - AluSx SINE Alu -14 298 2 360 256 105 63 chr17 28059584 28059822 -57378658 + MIR SINE MIR 1 248 -14 2107 84 6 26 chr17 28059873 28060051 -57378429 - AluSg SINE Alu -4 306 135 2024 90 45 17 chr17 28060051 28060340 -57378140 - AluSg SINE Alu -13 297 1 2107 84 6 26 chr17 28060340 28060472 -57378008 - AluSg SINE Alu -175 135 2 1951 69 0 0 chr17 28060480 28060727 -57377753 - AluY SINE Alu -10 301 55 256 209 30 45 chr17 28060873 28060940 -57377540 - MIR SINE MIR -122 140 75 2009 108 21 0 chr17 28061474 28061753 -57376727 + AluSq SINE Alu 1 308 0 208 0 0 0 chr17 28061753 28061776 -57376704 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1024 203 4 30 chr17 28061927 28062164 -57376316 + AluJo SINE Alu 70 300 -12 2099 121 0 7 chr17 28062377 28062684 -57375796 - AluSx SINE Alu -7 305 1 1806 172 7 0 chr17 28062791 28063094 -57375386 + AluJb SINE Alu 6 310 -2 25 0 0 0 chr17 28063583 28063608 -57374872 + AT_rich Low_complexity Low_complexity 1 25 0 665 185 0 0 chr17 28063612 28063720 -57374760 - FLAM_A SINE Alu -27 115 8 2217 94 0 10 chr17 28063913 28064221 -57374259 + AluSq SINE Alu 1 305 -8 654 244 183 45 chr17 28064361 28064481 -57373999 - L1ME4a LINE L1 -240 5881 5779 1921 113 10 14 chr17 28064481 28064773 -57373707 - AluSg SINE Alu -19 291 1 654 244 183 45 chr17 28064773 28065095 -57373385 - L1ME4a LINE L1 -342 5779 5378 1589 158 17 34 chr17 28065157 28065455 -57373025 - AluJo SINE Alu -19 293 1 830 139 36 7 chr17 28065541 28065678 -57372802 - AluSg/x SINE Alu -18 294 154 2110 107 10 7 chr17 28065927 28066237 -57372243 - AluSx SINE Alu -1 311 1 613 193 171 59 chr17 28066498 28066685 -57371795 - MER3 DNA MER1_type -1 208 1 33 56 0 0 chr17 28067378 28067432 -57371048 + GC_rich Low_complexity Low_complexity 1 54 0 23 101 0 0 chr17 28067598 28067677 -57370803 + GC_rich Low_complexity Low_complexity 1 79 0 30 27 0 0 chr17 28067742 28067779 -57370701 + GC_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr17 28067856 28067887 -57370593 + GC_rich Low_complexity Low_complexity 1 31 0 225 274 145 16 chr17 28068265 28068389 -57370091 + L2 LINE L2 3172 3311 -2 395 289 29 0 chr17 28069029 28069133 -57369347 - MIR SINE MIR -60 148 42 911 215 220 35 chr17 28069338 28069877 -57368603 - LTR50 LTR ERVL -57 738 1 780 158 201 34 chr17 28070234 28070443 -57368037 - Tigger7 DNA MER2_type 0 2587 2344 1952 113 14 0 chr17 28070443 28070727 -57367753 - AluSx SINE Alu -20 292 5 283 95 0 48 chr17 28070727 28070769 -57367711 - Alu SINE Alu -262 40 1 2129 108 7 0 chr17 28070777 28071073 -57367407 - AluSq SINE Alu -15 298 1 2281 87 0 13 chr17 28071075 28071250 -57367230 - AluSx SINE Alu -4 308 137 1948 82 43 7 chr17 28071250 28071557 -57366923 - AluY SINE Alu 0 311 1 2281 87 0 13 chr17 28071557 28071693 -57366787 - AluSx SINE Alu -175 137 1 413 170 107 204 chr17 28071701 28071779 -57366701 - MIR SINE MIR -71 191 107 3096 156 20 38 chr17 28071779 28072363 -57366117 - L1MB5 LINE L1 -1 6173 5600 413 170 107 204 chr17 28072363 28072403 -57366077 - MIR SINE MIR -155 107 65 1733 148 54 7 chr17 28072403 28072700 -57365780 - AluJb SINE Alu -1 311 1 413 170 107 204 chr17 28072700 28072786 -57365694 - MIR SINE MIR -197 65 6 2298 82 0 7 chr17 28073109 28073413 -57365067 + AluSg1 SINE Alu 3 304 -5 213 39 0 0 chr17 28074423 28074449 -57364031 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 1886 144 7 3 chr17 28074934 28075239 -57363241 - AluSx SINE Alu -6 306 1 2133 90 23 13 chr17 28075596 28075906 -57362574 + AluSp SINE Alu 1 313 0 263 209 79 106 chr17 28075914 28075960 -57362520 - MIR SINE MIR -62 146 100 2376 88 0 0 chr17 28075960 28076266 -57362214 + AluSx SINE Alu 1 306 -6 263 209 79 106 chr17 28076266 28076347 -57362133 - MIR SINE MIR -108 100 16 2217 85 0 0 chr17 28077088 28077382 -57361098 - AluY SINE Alu -17 294 1 2151 114 0 0 chr17 28077383 28077682 -57360798 - AluSq SINE Alu -14 299 1 1091 47 13 27 chr17 28078008 28078157 -57360323 - L1PB1 LINE L1 -2 6149 6003 2300 87 0 10 chr17 28078184 28078495 -57359985 - AluSx SINE Alu -4 308 1 268 376 81 13 chr17 28078559 28078708 -57359772 + L2 LINE L2 3097 3255 -17 2190 91 0 7 chr17 28078888 28079186 -57359294 - AluSg1 SINE Alu -13 296 1 1849 138 0 39 chr17 28079361 28079672 -57358808 + AluJb SINE Alu 1 299 -13 359 224 237 83 chr17 28079918 28080018 -57358462 - L3 LINE CR1 -111 1466 1383 2084 119 0 0 chr17 28080018 28080320 -57358160 + AluSx SINE Alu 1 302 -10 359 224 237 83 chr17 28080320 28080447 -57358033 - L3 LINE CR1 -194 1383 1204 * 448 315 94 33 chr17 28080434 28080796 -57357684 - L2 LINE L2 -998 2316 1933 2159 108 0 22 chr17 28081654 28081969 -57356511 + AluSx SINE Alu 1 308 -4 2167 89 7 7 chr17 28082406 28082709 -57355771 - AluSx SINE Alu -9 303 1 967 118 0 0 chr17 28082709 28082844 -57355636 - AluSq/x SINE Alu -178 135 1 335 229 100 8 chr17 28084444 28084562 -57353918 - MIR SINE MIR -63 145 32 379 306 103 55 chr17 28084671 28084904 -57353576 - L2 LINE L2 -1 3271 3010 2299 86 0 0 chr17 28084904 28085205 -57353275 - AluSx SINE Alu -6 306 6 379 306 103 55 chr17 28085205 28085369 -57353111 - L2 LINE L2 -262 3010 2855 665 314 42 24 chr17 28085393 28085730 -57352750 - L2 LINE L2 -568 2746 2404 2118 94 3 24 chr17 28085754 28086052 -57352428 - AluSg SINE Alu -16 294 3 1401 234 142 16 chr17 28086448 28086712 -57351768 - MLT1D LTR MaLR 0 505 275 2310 94 0 0 chr17 28086712 28087019 -57351461 - AluSg SINE Alu -3 307 1 1401 234 142 16 chr17 28087019 28087185 -57351295 - MLT1D LTR MaLR -230 275 21 2555 101 27 5 chr17 28087188 28087555 -57350925 - THE1C LTR MaLR 0 375 1 413 250 81 15 chr17 28087582 28087718 -57350762 + MLT1L LTR MaLR 422 566 -49 360 255 0 43 chr17 28088264 28088358 -57350122 - L1MC4 LINE L1 -1339 6703 6614 * 363 277 12 0 chr17 28088287 28088370 -57350110 + L1MC4 LINE L1 6620 6703 -1339 218 325 119 1 chr17 28088508 28088626 -57349854 + MIR SINE MIR 23 153 -61 880 284 101 3 chr17 28088636 28088992 -57349488 + L2 LINE L2 1418 1808 -1506 414 275 58 47 chr17 28088993 28089164 -57349316 - L1ME3A LINE L1 -58 6112 5940 2193 146 5 61 chr17 28089173 28089523 -57348957 - L1MB5 LINE L1 -14 6160 5837 1854 125 19 29 chr17 28089523 28089836 -57348644 - AluSx SINE Alu -2 310 1 2193 146 5 61 chr17 28089836 28089911 -57348569 - L1MB5 LINE L1 -337 5837 5759 835 156 0 0 chr17 28089911 28090039 -57348441 - AluJb SINE Alu -182 130 3 253 88 0 0 chr17 28090043 28090077 -57348403 + L1MA4A LINE L1 6116 6149 -154 1437 138 22 0 chr17 28090105 28090336 -57348144 + AluJb SINE Alu 67 302 -10 512 202 10 0 chr17 28090337 28090441 -57348039 - L1MA4A LINE L1 -182 6121 6017 * 1354 229 45 64 chr17 28090438 28090787 -57347693 - L1ME3A LINE L1 -286 5884 5530 2242 96 0 0 chr17 28090787 28091080 -57347400 + AluSg SINE Alu 1 293 -17 2178 114 0 0 chr17 28091087 28091385 -57347095 + AluSx SINE Alu 1 298 -14 1354 229 45 64 chr17 28091385 28091450 -57347030 - L1ME3A LINE L1 -646 5524 5470 233 333 0 14 chr17 28091479 28091548 -57346932 + L2 LINE L2 1829 1896 -1418 457 183 30 17 chr17 28091551 28091667 -57346813 - L1MC3 LINE L1 -306 7689 7364 1639 159 3 20 chr17 28091731 28092033 -57346447 - AluSx SINE Alu -14 298 2 1835 238 80 124 chr17 28092078 28092362 -57346118 + L2 LINE L2 1989 2284 -1029 1620 184 7 16 chr17 28092362 28092667 -57345813 - AluJb SINE Alu -10 302 1 1835 238 80 124 chr17 28092667 28092728 -57345752 + L2 LINE L2 2284 2346 -967 2069 99 3 14 chr17 28092728 28093052 -57345428 + AluSg SINE Alu 1 310 0 1835 238 80 124 chr17 28093052 28093083 -57345397 + L2 LINE L2 2346 2377 -936 1769 113 4 22 chr17 28093083 28093252 -57345228 - AluSp SINE Alu -13 300 136 2181 84 0 23 chr17 28093252 28093561 -57344919 - AluY SINE Alu -9 302 1 1769 113 4 22 chr17 28093561 28093666 -57344814 - AluSp SINE Alu -177 136 31 3981 119 49 62 chr17 28093667 28094001 -57344479 + LTR12 LTR ERV1 2 339 -349 2008 93 0 11 chr17 28094001 28094281 -57344199 + AluY SINE Alu 23 299 -12 3981 119 49 62 chr17 28094281 28094642 -57343838 + LTR12 LTR ERV1 339 688 0 1835 238 80 124 chr17 28094642 28095010 -57343470 + L2 LINE L2 2377 2714 -599 230 125 50 0 chr17 28095010 28095050 -57343430 - L1ME LINE L1 -606 5564 5523 1835 238 80 124 chr17 28095050 28095347 -57343133 + L2 LINE L2 2714 3023 -290 365 259 141 83 chr17 28095385 28095853 -57342627 - L1MEd LINE L1 -5623 496 2 341 247 70 12 chr17 28095904 28096050 -57342430 + MIR SINE MIR 28 147 -61 2115 119 7 0 chr17 28096457 28096767 -57341713 - AluSx SINE Alu 0 312 1 294 182 61 0 chr17 28096814 28096913 -57341567 + (TA)n Simple_repeat Simple_repeat 1 105 0 45 93 0 6 chr17 28096913 28097046 -57341434 + AT_rich Low_complexity Low_complexity 1 134 -26 1983 138 0 0 chr17 28097046 28097336 -57341144 + AluSx SINE Alu 1 290 -22 45 93 0 6 chr17 28097336 28097363 -57341117 + AT_rich Low_complexity Low_complexity 134 160 0 591 137 11 0 chr17 28097397 28097492 -57340988 + L1MB3 LINE L1 6076 6171 -12 1808 155 28 0 chr17 28097515 28097805 -57340675 + AluJo SINE Alu 1 298 -14 1304 177 49 4 chr17 28097822 28098087 -57340393 - L1MC3 LINE L1 -44 7741 7465 2134 116 0 0 chr17 28098124 28098426 -57340054 + AluSx SINE Alu 1 302 -10 1237 154 99 4 chr17 28098429 28098682 -57339798 - L1MB3 LINE L1 -13 6170 5894 470 168 53 26 chr17 28098675 28098788 -57339692 - L1MC3 LINE L1 -305 7480 7365 * 494 240 143 10 chr17 28098806 28099007 -57339473 - MIR SINE MIR -26 236 7 1677 157 45 0 chr17 28099156 28099442 -57339038 - AluJb SINE Alu -13 299 1 899 253 120 29 chr17 28099807 28100182 -57338298 - L1ME3 LINE L1 -276 5886 5478 754 164 0 16 chr17 28100776 28100904 -57337576 - FLAM_C SINE Alu -16 127 2 492 294 130 17 chr17 28100999 28101230 -57337250 + MIR SINE MIR 6 262 0 349 254 296 18 chr17 28101243 28101412 -57337068 + MIR SINE MIR 47 262 0 447 287 168 22 chr17 28101537 28101805 -57336675 - L1ME4a LINE L1 -12 6109 5803 574 236 20 14 chr17 28101820 28101968 -57336512 - L1ME4a LINE L1 -425 5696 5548 29 47 0 0 chr17 28102248 28102291 -57336189 + AT_rich Low_complexity Low_complexity 1 43 0 1354 154 5 0 chr17 28102314 28102535 -57335945 + AluJb SINE Alu 87 308 -4 2157 116 0 0 chr17 28102640 28102941 -57335539 - AluSx SINE Alu -11 301 1 609 262 122 66 chr17 28103285 28103781 -57334699 - L1MC4a LINE L1 -232 5889 5387 2096 90 0 48 chr17 28103781 28103925 -57334555 + AluSg SINE Alu 1 124 -186 1812 102 13 70 chr17 28103925 28104239 -57334241 + AluY SINE Alu 2 297 -14 2096 90 0 48 chr17 28104239 28104404 -57334076 + AluSg SINE Alu 124 295 -15 609 262 122 66 chr17 28104404 28104468 -57334012 - L1MC4a LINE L1 -734 5387 5328 453 282 100 70 chr17 28104455 28104612 -57333868 - L1ME4a LINE L1 -294 5827 5676 * 1884 104 4 8 chr17 28104612 28104880 -57333600 - AluSx SINE Alu -2 310 44 1964 129 7 3 chr17 28104886 28105181 -57333299 - AluSx SINE Alu -16 296 1 453 282 100 70 chr17 28105181 28105346 -57333134 - L1ME4a LINE L1 -449 5672 5488 297 279 62 90 chr17 28105886 28106084 -57332396 + MLT1K LTR MaLR 153 344 -244 2027 116 0 20 chr17 28106084 28106386 -57332094 - AluJb SINE Alu -16 296 1 297 279 62 90 chr17 28106386 28106431 -57332049 + MLT1K LTR MaLR 344 389 -199 190 274 67 74 chr17 28106714 28106849 -57331631 - L2 LINE L2 -634 2680 2547 1593 168 63 58 chr17 28106902 28107284 -57331196 - MLT1B LTR MaLR 0 390 7 2063 119 3 0 chr17 28107459 28107754 -57330726 - AluSx SINE Alu -16 296 1 281 160 20 0 chr17 28107795 28107845 -57330635 - MER66B LTR ERV1 -141 345 295 2044 135 0 0 chr17 28107909 28108212 -57330268 - AluSx SINE Alu -9 303 1 1781 162 13 3 chr17 28108514 28108816 -57329664 + AluJo SINE Alu 1 305 -7 373 249 75 17 chr17 28108816 28108989 -57329491 - Zaphod DNA AcHobo -172 3859 3677 1975 141 3 0 chr17 28108999 28109298 -57329182 - AluSq SINE Alu -13 300 1 520 263 133 26 chr17 28109353 28109466 -57329014 - L1M4 LINE L1 -1636 4510 4410 599 230 32 0 chr17 28109466 28109592 -57328888 - FLAM_A SINE Alu 0 133 4 520 263 133 26 chr17 28109592 28109908 -57328572 - L1M4 LINE L1 -1736 4410 4035 1659 143 15 80 chr17 28110099 28110228 -57328252 - L1ME LINE L1 -574 5592 5456 2124 99 3 7 chr17 28110228 28110522 -57327958 - AluSg1 SINE Alu -16 293 1 1659 143 15 80 chr17 28110522 28110686 -57327794 - L1ME LINE L1 -710 5456 5336 2346 80 0 0 chr17 28110686 28110986 -57327494 - AluY SINE Alu -11 300 1 1659 143 15 80 chr17 28110986 28111105 -57327375 - L1ME LINE L1 -830 5336 5211 560 225 54 0 chr17 28111245 28111403 -57327077 + MLT1J2 LTR MaLR 253 417 -29 1951 120 0 7 chr17 28111433 28111717 -57326763 + AluSx SINE Alu 1 315 0 298 0 0 0 chr17 28111717 28111750 -57326730 + (TAAA)n Simple_repeat Simple_repeat 1 104 0 1910 139 0 7 chr17 28111936 28112237 -57326243 - AluJb SINE Alu -9 303 5 2104 121 0 0 chr17 28112272 28112579 -57325901 - AluSx SINE Alu -5 307 1 305 329 90 7 chr17 28112708 28112863 -57325617 - MIR SINE MIR -12 250 83 21 0 0 0 chr17 28113457 28113478 -57325002 + AT_rich Low_complexity Low_complexity 1 21 0 2186 127 48 25 chr17 28113491 28113670 -57324810 - THE1B LTR MaLR 0 364 191 2184 110 0 0 chr17 28113670 28113969 -57324511 - AluSx SINE Alu -13 299 1 2186 127 48 25 chr17 28113969 28114143 -57324337 - THE1B LTR MaLR -173 191 3 22 35 0 0 chr17 28114150 28114179 -57324301 + AT_rich Low_complexity Low_complexity 1 29 0 1533 150 0 81 chr17 28114275 28114606 -57323874 + AluJb SINE Alu 1 306 0 21 0 0 0 chr17 28114624 28114645 -57323835 + AT_rich Low_complexity Low_complexity 1 21 0 2827 163 16 51 chr17 28114645 28114695 -57323785 - L1MB3 LINE L1 -9 6174 6124 2033 119 0 10 chr17 28114695 28114989 -57323491 - AluSx SINE Alu -21 291 1 2827 163 16 51 chr17 28114989 28115000 -57323480 - L1MB3 LINE L1 -59 6124 6114 2106 85 3 0 chr17 28115000 28115282 -57323198 - AluSc SINE Alu -18 291 9 2827 163 16 51 chr17 28115282 28115790 -57322690 - L1MB3 LINE L1 -69 6114 5624 246 279 0 0 chr17 28115832 28115900 -57322580 - MARNA DNA Mariner -198 388 321 281 294 32 48 chr17 28115985 28116111 -57322369 - MIR SINE MIR -124 138 15 27 0 0 0 chr17 28116194 28116221 -57322259 + AT_rich Low_complexity Low_complexity 1 27 0 2290 81 7 0 chr17 28116345 28116641 -57321839 + AluSq SINE Alu 1 298 -15 298 310 50 0 chr17 28116791 28116891 -57321589 + LTR16A LTR ERVL 10 114 -336 694 135 19 0 chr17 28116907 28117011 -57321469 - FLAM_C SINE Alu -12 131 26 1802 145 30 3 chr17 28117011 28117148 -57321332 + AluSx SINE Alu 1 133 -179 1945 94 0 57 chr17 28117148 28117445 -57321035 + AluSx SINE Alu 1 280 -32 1802 145 30 3 chr17 28117445 28117611 -57320869 + AluSx SINE Alu 133 312 0 257 132 53 0 chr17 28117629 28117667 -57320813 - Alu SINE Alu -260 40 1 270 322 11 11 chr17 28117711 28117798 -57320682 + LTR16B LTR ERVL 131 217 -247 371 319 21 27 chr17 28117838 28118026 -57320454 + LTR16B LTR ERVL 278 464 0 2349 74 0 0 chr17 28118258 28118580 -57319900 + AluY SINE Alu 1 311 0 2084 97 0 0 chr17 28118949 28119267 -57319213 + AluSx SINE Alu 6 323 0 1663 165 17 7 chr17 28119269 28119566 -57318914 + AluJo SINE Alu 3 302 -10 792 151 0 0 chr17 28119628 28119747 -57318733 - MER1A DNA MER1_type 0 533 415 2098 98 0 33 chr17 28119747 28120053 -57318427 - AluSg SINE Alu -14 296 1 1908 133 4 14 chr17 28120058 28120336 -57318144 - MER1A DNA MER1_type -199 330 56 1641 162 0 72 chr17 28120491 28120825 -57317655 - AluJo SINE Alu -2 310 1 2284 76 0 0 chr17 28121204 28121506 -57316974 + AluY SINE Alu 1 302 -9 32 26 0 0 chr17 28121721 28121760 -57316720 + AT_rich Low_complexity Low_complexity 1 39 0 2008 108 3 7 chr17 28121760 28122047 -57316433 - AluSp SINE Alu -25 288 3 1827 122 0 48 chr17 28123095 28123260 -57315220 - AluJb SINE Alu -15 297 152 1893 102 39 39 chr17 28123260 28123565 -57314915 - AluY SINE Alu -6 305 1 1827 122 0 48 chr17 28123565 28123711 -57314769 - AluJb SINE Alu -160 152 1 848 102 8 16 chr17 28123713 28123840 -57314640 - AluJb SINE Alu -186 126 1 282 130 304 0 chr17 28123842 28123911 -57314569 - L1MB3 LINE L1 -43 6140 6051 330 244 33 11 chr17 28123979 28124069 -57314411 + LTR67 LTR ERVL 98 189 -368 204 311 170 0 chr17 28124954 28125060 -57313420 - L2 LINE L2 -5 3308 3185 1880 139 4 4 chr17 28126051 28126356 -57312124 - AluJo SINE Alu 0 305 1 2540 145 5 0 chr17 28126393 28126779 -57311701 + MLT1B LTR MaLR 1 388 -2 1649 100 100 33 chr17 28126854 28127125 -57311355 - AluSg SINE Alu -21 289 1 1253 204 84 0 chr17 28127409 28127708 -57310772 + MER33 DNA MER1_type 1 324 0 2126 100 0 19 chr17 28127902 28128212 -57310268 - AluSx SINE Alu -8 304 1 2018 121 0 29 chr17 28128836 28128977 -57309503 + AluSx SINE Alu 1 145 -167 2411 77 0 0 chr17 28128977 28129288 -57309192 + AluSp SINE Alu 1 311 -2 2018 121 0 29 chr17 28129288 28129460 -57309020 + AluSx SINE Alu 145 305 -7 187 285 35 130 chr17 28129559 28129990 -57308490 + L2 LINE L2 2842 3231 -41 285 98 0 0 chr17 28130556 28130597 -57307883 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1855 129 4 0 chr17 28130598 28130876 -57307604 - AluSx SINE Alu -33 279 1 287 292 67 33 chr17 28130953 28131073 -57307407 - MER5A DNA MER1_type -30 159 36 216 322 56 35 chr17 28130955 28131098 -57307382 + MER5A DNA MER1_type 44 189 0 * 2254 94 0 7 chr17 28131150 28131457 -57307023 + AluSp SINE Alu 1 305 -8 1743 181 0 10 chr17 28131466 28131775 -57306705 + AluJb SINE Alu 2 307 -5 914 179 0 0 chr17 28131812 28131963 -57306517 + FRAM SINE Alu 10 160 -16 285 284 336 8 chr17 28132066 28132200 -57306280 - MER5B DNA MER1_type 0 178 1 505 203 16 128 chr17 28132291 28132478 -57306002 + MER5B DNA MER1_type 1 166 -12 216 0 0 0 chr17 28132580 28132604 -57305876 + (T)n Simple_repeat Simple_repeat 1 24 0 4202 13 2 0 chr17 28132616 28133089 -57305391 - L1PA2 LINE L1 0 6155 5682 261 308 15 0 chr17 28133535 28133600 -57304880 - L2 LINE L2 -1 3312 3247 262 227 76 0 chr17 28133690 28133756 -57304724 - L2 LINE L2 -222 3050 2980 704 188 100 6 chr17 28133777 28133937 -57304543 + MER5B DNA MER1_type 1 175 -3 180 0 0 0 chr17 28133975 28133995 -57304485 + (CA)n Simple_repeat Simple_repeat 1 20 0 546 291 183 27 chr17 28134159 28134786 -57303694 - L2 LINE L2 -8 3264 2538 870 250 31 25 chr17 28134794 28135116 -57303364 - L1MEc LINE L1 -6002 394 5 2005 137 3 3 chr17 28135122 28135429 -57303051 + AluSx SINE Alu 1 307 -5 232 167 67 25 chr17 28135814 28135833 -57302647 - L1MC5 LINE L1 -252 7709 7692 1502 195 13 10 chr17 28135833 28136140 -57302340 + AluJo SINE Alu 1 308 -4 232 167 67 25 chr17 28136140 28136240 -57302240 - L1MC5 LINE L1 -269 7692 7585 814 128 143 0 chr17 28137042 28137198 -57301282 - AluSg/x SINE Alu 0 308 134 1632 160 24 3 chr17 28137198 28137513 -57300967 - AluSx SINE Alu 0 312 1 313 206 134 10 chr17 28137649 28137746 -57300734 - MIR SINE MIR -70 192 84 189 340 0 0 chr17 28138545 28138592 -57299888 - L2 LINE L2 0 3313 3267 234 162 0 0 chr17 28138722 28138759 -57299721 + MER91 DNA MER1_type 104 140 0 319 216 52 164 chr17 28139047 28139260 -57299220 - MIR SINE MIR -22 240 52 665 271 104 14 chr17 28139270 28139491 -57298989 + MIR SINE MIR 19 259 -3 477 0 0 0 chr17 28139491 28139544 -57298936 + (CAT)n Simple_repeat Simple_repeat 2 54 0 32 0 0 0 chr17 28140203 28140235 -57298245 + AT_rich Low_complexity Low_complexity 1 32 0 37995 53 6 2 chr17 28140248 28145803 -57292677 - L1PA4 LINE L1 -3 6467 893 576 161 0 0 chr17 28145770 28145857 -57292623 - L1PA4 LINE L1 -6365 96 10 * 310 333 51 17 chr17 28145947 28146064 -57292416 - MLT2E LTR ERVL -469 159 39 589 224 82 0 chr17 28146835 28146969 -57291511 - MER45A DNA AcHobo -2 176 32 1990 180 100 27 chr17 28146969 28147418 -57291062 - MLT1D LTR MaLR -23 482 1 263 103 0 0 chr17 28147656 28147695 -57290785 + MER53 DNA DNA 2 40 -149 570 232 28 50 chr17 28148402 28148583 -57289897 - MER104 DNA MER2_type -3 177 1 276 154 0 0 chr17 28148585 28148637 -57289843 + CT-rich Low_complexity Low_complexity 1 52 0 2041 118 20 0 chr17 28148637 28148942 -57289538 - AluSx SINE Alu 0 312 2 1736 139 3 21 chr17 28148992 28149310 -57289170 - AluJb SINE Alu 0 313 1 430 68 123 0 chr17 28149580 28149653 -57288827 - L1MB4 LINE L1 -4 6176 6095 546 206 135 0 chr17 28149782 28149908 -57288572 - MLT2B1 LTR ERVL -377 143 1 249 147 0 0 chr17 28150713 28150747 -57287733 - Alu SINE Alu -268 34 1 303 230 75 31 chr17 28150750 28151417 -57287063 + L1MD3 LINE L1 6765 7401 -640 249 83 0 0 chr17 28151417 28151453 -57287027 + (TTTTG)n Simple_repeat Simple_repeat 4 39 0 303 230 75 31 chr17 28151453 28152000 -57286480 + L1MD3 LINE L1 7401 8026 -15 1944 122 4 0 chr17 28152000 28152305 -57286175 - AluSg SINE Alu 0 306 1 303 230 75 31 chr17 28152305 28152321 -57286159 + L1MD3 LINE L1 8026 8040 -1 * 847 254 126 47 chr17 28152317 28152751 -57285729 - L1ME4a LINE L1 -71 6050 5550 2069 107 7 0 chr17 28152751 28153042 -57285438 - AluSx SINE Alu -19 293 1 847 254 126 47 chr17 28153042 28153219 -57285261 - L1ME4a LINE L1 -571 5550 5388 2052 131 0 0 chr17 28153749 28154046 -57284434 + AluSx SINE Alu 1 297 -15 226 237 93 25 chr17 28154048 28154166 -57284314 - L1ME4a LINE L1 -73 6048 5923 1745 99 0 0 chr17 28154427 28154660 -57283820 + AluSx SINE Alu 1 233 -79 5083 52 0 133 chr17 28154660 28155454 -57283026 - LTR12 LTR ERV1 0 688 1 55645 86 6 12 chr17 28155454 28163926 -57274554 - HERV9 LTR ERV1 0 8399 1 6590 72 5 2 chr17 28163926 28164750 -57273730 - LTR12 LTR ERV1 0 826 1 508 130 0 0 chr17 28164750 28164827 -57273653 + AluSx SINE Alu 228 304 -6 1726 148 7 38 chr17 28165030 28165368 -57273112 - AluJb SINE Alu 0 330 2 2139 126 3 0 chr17 28165550 28165843 -57272637 - AluSg SINE Alu -16 294 1 978 173 46 115 chr17 28166191 28166514 -57271966 + AluJo SINE Alu 2 302 0 497 278 162 32 chr17 28167469 28167685 -57270795 - MIR SINE MIR -6 256 13 261 0 0 0 chr17 28167707 28167736 -57270744 + (CA)n Simple_repeat Simple_repeat 1 29 0 181 308 0 0 chr17 28168065 28168104 -57270376 + L3 LINE CR1 1430 1468 -109 860 241 61 110 chr17 28168113 28168641 -57269839 + MER20B DNA MER1_type 3 504 -279 370 149 81 0 chr17 28168732 28168806 -57269674 - MER116 DNA Mariner 0 80 1 270 212 88 77 chr17 28168903 28169034 -57269446 + MER20B DNA MER1_type 606 741 -42 1829 157 3 32 chr17 28169034 28169346 -57269134 + AluSx SINE Alu 4 306 -6 270 212 88 77 chr17 28169346 28169384 -57269096 + MER20B DNA MER1_type 741 777 -6 408 230 68 68 chr17 28169580 28169665 -57268815 - MIR SINE MIR -63 199 112 2371 143 25 3 chr17 28169665 28170022 -57268458 - MLT1A1 LTR MaLR 0 365 1 408 230 68 68 chr17 28170022 28170084 -57268396 - MIR SINE MIR -149 113 52 734 214 21 16 chr17 28170108 28170295 -57268185 - MER53 DNA DNA 0 189 2 2108 133 0 20 chr17 28170332 28170633 -57267847 - AluSx SINE Alu -17 295 1 2082 155 0 0 chr17 28170633 28170942 -57267538 - AluJb SINE Alu -3 309 1 2323 110 3 3 chr17 28170951 28171261 -57267219 - AluSx SINE Alu -2 310 1 258 250 138 0 chr17 28171360 28171476 -57267004 + MIR3 SINE MIR 42 173 -35 480 239 0 52 chr17 28171479 28171613 -57266867 - L2 LINE L2 -15 3298 3172 1979 163 0 0 chr17 28171680 28171974 -57266506 - AluJb SINE Alu -18 294 1 266 233 346 15 chr17 28172052 28172185 -57266295 - MER69A DNA AcHobo 0 177 1 289 316 1 0 chr17 28172221 28172318 -57266162 - MIR SINE MIR -63 145 62 1925 142 25 4 chr17 28172402 28172683 -57265797 - AluSx SINE Alu -25 287 1 237 256 73 0 chr17 28172710 28172792 -57265688 + MIR SINE MIR 65 152 -110 411 145 0 0 chr17 28173299 28173368 -57265112 + (TA)n Simple_repeat Simple_repeat 2 70 0 868 160 91 5 chr17 28173395 28173582 -57264898 - MIR SINE MIR -32 230 28 280 227 142 39 chr17 28173608 28173743 -57264737 - MIR SINE MIR -59 149 10 394 258 223 6 chr17 28174175 28174354 -57264126 + MIR SINE MIR 37 252 -10 300 81 0 108 chr17 28174413 28174487 -57263993 - L1MB3 LINE L1 0 6183 6118 1677 139 82 11 chr17 28174492 28174759 -57263721 + AluJo SINE Alu 1 286 -26 1560 163 50 0 chr17 28174766 28175043 -57263437 - L1MB3 LINE L1 -21 6162 5872 320 270 126 0 chr17 28175347 28175458 -57263022 + MIR SINE MIR 60 184 -78 1651 170 0 44 chr17 28175665 28175959 -57262521 - AluJo SINE Alu -31 281 1 249 57 0 0 chr17 28176265 28176300 -57262180 + (TG)n Simple_repeat Simple_repeat 2 36 0 2183 116 7 0 chr17 28176300 28176592 -57261888 - AluSx SINE Alu -18 294 1 502 210 172 6 chr17 28176732 28176889 -57261591 - MER5A DNA MER1_type -3 186 4 239 286 29 9 chr17 28177128 28177233 -57261247 - L1ME4a LINE L1 -9 6112 6006 953 207 62 0 chr17 28177616 28177824 -57260656 - MER58A DNA MER1_type 0 224 4 372 183 56 0 chr17 28177847 28177918 -57260562 - MER58B DNA MER1_type -3 338 264 337 253 0 23 chr17 28177930 28178017 -57260463 + CT-rich Low_complexity Low_complexity 1 85 0 744 82 0 0 chr17 28178018 28178115 -57260365 - AluSg/x SINE Alu -5 304 208 571 241 97 7 chr17 28178263 28178408 -57260072 - MER58C DNA MER1_type -43 172 15 248 303 0 15 chr17 28178592 28178658 -57259822 - L3 LINE CR1 -1 1576 1512 693 199 0 0 chr17 28179005 28179238 -57259242 + (CA)n Simple_repeat Simple_repeat 1 233 0 261 0 0 0 chr17 28179495 28179524 -57258956 + (TTTAA)n Simple_repeat Simple_repeat 3 31 0 654 175 18 0 chr17 28179526 28179640 -57258840 - FLAM_C SINE Alu -17 116 1 292 227 56 82 chr17 28179640 28179789 -57258691 - L1ME3A LINE L1 -47 6115 5961 2042 145 0 0 chr17 28179820 28180117 -57258363 + AluSq SINE Alu 1 297 -16 1330 150 0 10 chr17 28180117 28180317 -57258163 - AluSq SINE Alu -114 199 2 415 277 225 54 chr17 28180464 28181020 -57257460 + L1MC4a LINE L1 5284 5934 -1874 1873 178 3 0 chr17 28181207 28181516 -57256964 + AluJb SINE Alu 1 310 -2 210 118 0 0 chr17 28182432 28182466 -57256014 + (TAAAA)n Simple_repeat Simple_repeat 5 38 0 785 218 102 0 chr17 28182830 28183055 -57255425 - MIR SINE MIR -2 260 13 2315 95 0 10 chr17 28183112 28183416 -57255064 + AluSp SINE Alu 1 301 -12 2332 83 3 13 chr17 28184046 28184358 -57254122 - AluY SINE Alu -2 309 1 1771 189 48 3 chr17 28184383 28184716 -57253764 - MER7A DNA MER2_type 0 346 1 3664 170 83 38 chr17 28184936 28185747 -57252733 - L1MC3 LINE L1 0 7785 6939 793 264 6 6 chr17 28185957 28186135 -57252345 + MER8 DNA MER2_type 2 179 -60 395 188 0 0 chr17 28186110 28186174 -57252306 + MER2 DNA MER2_type 282 345 0 * 218 204 0 0 chr17 28186870 28186919 -57251561 + A-rich Low_complexity Low_complexity 1 49 0 2131 119 10 3 chr17 28187425 28187720 -57250760 + AluSx SINE Alu 2 298 -14 237 306 0 28 chr17 28187733 28187805 -57250675 - MIR SINE MIR -191 71 2 215 268 143 36 chr17 28187811 28187923 -57250557 - MIR SINE MIR -76 132 8 2175 131 7 0 chr17 28189471 28189777 -57248703 + AluSx SINE Alu 1 308 -4 755 153 153 13 chr17 28189795 28189945 -57248535 + AluSq SINE Alu 137 307 -6 22 35 0 0 chr17 28190754 28190783 -57247697 + AT_rich Low_complexity Low_complexity 1 29 0 419 284 0 17 chr17 28191562 28191678 -57246802 + L3 LINE CR1 1444 1557 -20 204 336 107 33 chr17 28192181 28192303 -57246177 + L2 LINE L2 3137 3267 -5 2171 126 7 3 chr17 28192895 28193205 -57245275 - AluSq SINE Alu -2 311 1 1215 173 31 9 chr17 28194372 28194598 -57243882 - AluJo SINE Alu -7 305 75 348 254 0 0 chr17 28194710 28194777 -57243703 - AluJo SINE Alu -235 67 1 1745 97 4 0 chr17 28195029 28195255 -57243225 + AluSp SINE Alu 1 227 -86 2402 97 7 0 chr17 28195364 28195674 -57242806 - AluSx SINE Alu 0 312 1 1162 118 56 130 chr17 28195674 28195944 -57242536 + LTR26E LTR ERV1 250 499 -123 22 35 0 0 chr17 28195944 28195973 -57242507 + AT_rich Low_complexity Low_complexity 1 29 0 2129 128 7 0 chr17 28195973 28196269 -57242211 - AluSx SINE Alu -10 302 5 797 187 0 0 chr17 28196274 28196408 -57242072 + LTR26B LTR ERV1 398 531 0 1814 171 0 13 chr17 28196433 28196732 -57241748 + AluJb SINE Alu 1 295 -17 2290 104 3 0 chr17 28196738 28197047 -57241433 + AluSq SINE Alu 1 310 -3 22 0 0 0 chr17 28197076 28197098 -57241382 + AT_rich Low_complexity Low_complexity 1 22 0 2274 100 10 0 chr17 28197170 28197459 -57241021 + AluSg SINE Alu 1 292 -18 1582 139 24 98 chr17 28197512 28197922 -57240558 + MER58D DNA MER1_type 1 380 -6 2186 127 0 3 chr17 28198529 28198843 -57239637 + AluSq SINE Alu 1 313 0 2230 94 10 3 chr17 28199014 28199311 -57239169 + AluSq SINE Alu 1 299 -14 2121 116 0 0 chr17 28199316 28199608 -57238872 + AluY SINE Alu 1 292 -19 2202 122 3 0 chr17 28199608 28199912 -57238568 + AluSq SINE Alu 1 305 -8 849 93 54 0 chr17 28199939 28200068 -57238412 + AluY SINE Alu 176 311 0 2202 121 10 0 chr17 28200136 28200434 -57238046 - AluSx SINE Alu -11 301 1 2245 90 7 13 chr17 28201339 28201640 -57236840 + AluSp SINE Alu 1 299 -14 795 161 0 0 chr17 28201747 28201877 -57236603 - FLAM_A SINE Alu 0 133 4 190 250 0 0 chr17 28203067 28203115 -57235365 + MIR SINE MIR 97 144 -118 183 80 0 0 chr17 28203813 28203838 -57234642 + (CCG)n Simple_repeat Simple_repeat 1 25 0 194 91 30 0 chr17 28205461 28205494 -57232986 + A-rich Low_complexity Low_complexity 5 38 0 798 213 102 0 chr17 28205858 28206083 -57232397 - MIR SINE MIR -2 260 13 2435 86 0 3 chr17 28206140 28206442 -57232038 + AluSp SINE Alu 1 301 -12 198 0 0 0 chr17 28208700 28208722 -57229758 + (GGGTG)n Simple_repeat Simple_repeat 3 24 0 2040 116 27 0 chr17 28209415 28209707 -57228773 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr17 28209845 28209874 -57228606 + AT_rich Low_complexity Low_complexity 1 29 0 1440 151 68 127 chr17 28210066 28210334 -57228146 - MER7A DNA MER2_type -2692 346 106 2054 145 0 0 chr17 28210334 28210637 -57227843 + AluSx SINE Alu 3 305 -7 1440 151 68 127 chr17 28210637 28210738 -57227742 - MER7A DNA MER2_type -2932 106 1 1649 111 157 0 chr17 28211211 28211473 -57227007 - AluSp SINE Alu 0 303 1 1655 168 44 0 chr17 28211739 28212036 -57226444 - AluJo SINE Alu -2 310 1 275 271 215 0 chr17 28212697 28212804 -57225676 + MER5A DNA MER1_type 54 183 -6 198 323 152 37 chr17 28212823 28212987 -57225493 - MER5A DNA MER1_type -6 183 1 1994 165 21 52 chr17 28214368 28214471 -57224009 + L1ME1 LINE L1 5721 5826 -508 909 215 169 33 chr17 28214471 28214773 -57223707 + MER2 DNA MER2_type 2 344 0 1994 165 21 52 chr17 28214773 28214833 -57223647 + L1ME1 LINE L1 5826 5886 -448 1975 136 35 0 chr17 28214833 28215120 -57223360 + AluSx SINE Alu 1 297 -15 1994 165 21 52 chr17 28215120 28215426 -57223054 + L1ME1 LINE L1 5886 6334 0 200 205 26 51 chr17 28216396 28216474 -57222006 + A-rich Low_complexity Low_complexity 2 77 0 2192 115 0 7 chr17 28216601 28216906 -57221574 - AluSx SINE Alu -9 303 1 439 357 87 5 chr17 28217067 28217252 -57221228 + L2 LINE L2 3073 3272 0 804 239 75 10 chr17 28217446 28217647 -57220833 - MIR SINE MIR 0 262 49 426 190 25 16 chr17 28217705 28217826 -57220654 + CT-rich Low_complexity Low_complexity 3 124 0 809 129 9 0 chr17 28217848 28217964 -57220516 + AluSq/x SINE Alu 1 117 -196 2090 112 0 0 chr17 28217967 28218244 -57220236 - AluSx SINE Alu -35 277 1 676 84 0 21 chr17 28218784 28218879 -57219601 + AluS SINE Alu 1 93 -219 1674 111 58 0 chr17 28218884 28219127 -57219353 - AluSq SINE Alu -56 257 1 977 125 13 13 chr17 28219249 28219401 -57219079 - AluSx SINE Alu -159 153 2 189 300 0 33 chr17 28219494 28219554 -57218926 + MIR SINE MIR 93 150 -58 1063 203 33 0 chr17 28219991 28220203 -57218277 - MER20 DNA MER1_type 0 219 1 565 258 23 0 chr17 28221192 28221320 -57217160 + MER5A DNA MER1_type 37 167 -22 190 316 88 35 chr17 28221710 28221824 -57216656 + L2 LINE L2 3194 3313 0 2175 98 11 0 chr17 28221828 28222150 -57216330 + AluY SINE Alu 1 325 0 665 228 88 6 chr17 28222814 28222985 -57215495 - MER58C DNA MER1_type -16 199 15 292 305 0 48 chr17 28223167 28223272 -57215208 - MIR3 SINE MIR -3 205 106 570 228 0 0 chr17 28223544 28223794 -57214686 + (CA)n Simple_repeat Simple_repeat 1 250 0 261 0 0 0 chr17 28224056 28224085 -57214395 + (TTTAA)n Simple_repeat Simple_repeat 3 31 0 625 193 18 0 chr17 28224087 28224201 -57214279 - FLAM_C SINE Alu -17 116 1 229 240 21 83 chr17 28224252 28224348 -57214132 - L1ME3A LINE L1 -118 6052 5963 1296 136 0 0 chr17 28224381 28224558 -57213922 + AluSq SINE Alu 1 177 -136 726 225 0 0 chr17 28224755 28224928 -57213552 + AluSg/x SINE Alu 129 301 -11 190 270 95 108 chr17 28224928 28225024 -57213456 + L2 LINE L2 3123 3219 -53 2028 93 3 93 chr17 28225024 28225199 -57213281 - AluSq SINE Alu -21 292 158 2449 73 0 13 chr17 28225199 28225514 -57212966 - AluY SINE Alu 0 311 1 2028 93 3 93 chr17 28225514 28225659 -57212821 - AluSq SINE Alu -155 158 1 190 270 95 108 chr17 28225659 28225672 -57212808 + L2 LINE L2 3219 3231 -41 1861 135 11 14 chr17 28225672 28225981 -57212499 - AluJb SINE Alu 0 309 2 190 270 95 108 chr17 28225981 28226017 -57212463 + L2 LINE L2 3231 3268 -4 1920 153 7 16 chr17 28226213 28226521 -57211959 + AluJb SINE Alu 1 305 -7 23 78 0 0 chr17 28226662 28226713 -57211767 + AT_rich Low_complexity Low_complexity 1 51 0 929 75 8 0 chr17 28227730 28227850 -57210630 - AluY SINE Alu -12 299 179 227 309 69 6 chr17 28227856 28228031 -57210449 - L1ME3A LINE L1 -237 5884 5699 1727 171 0 54 chr17 28228264 28228580 -57209900 + AluJo SINE Alu 1 299 -13 231 296 68 11 chr17 28229470 28229646 -57208834 - L1ME LINE L1 -237 5884 5699 2063 119 0 0 chr17 28229689 28229997 -57208483 - AluSc SINE Alu 0 308 1 22 0 0 0 chr17 28230534 28230556 -57207924 + AT_rich Low_complexity Low_complexity 1 22 0 263 257 27 14 chr17 28230902 28230976 -57207504 + MIR SINE MIR 178 252 -10 1791 150 80 0 chr17 28231054 28231341 -57207139 - AluJb SINE Alu -2 310 1 648 145 61 46 chr17 28231875 28232006 -57206474 - FLAM_A SINE Alu 0 133 1 2303 78 37 0 chr17 28232057 28232352 -57206128 + AluSp SINE Alu 1 306 -7 32 43 0 0 chr17 28232392 28232438 -57206042 + AT_rich Low_complexity Low_complexity 1 46 0 2172 100 20 13 chr17 28232494 28232794 -57205686 + AluSx SINE Alu 1 302 -10 2423 30 123 15 chr17 28232826 28233160 -57205320 - L1PA8 LINE L1 0 6172 5803 21 0 0 0 chr17 28233164 28233185 -57205295 + AT_rich Low_complexity Low_complexity 1 21 0 378 96 0 0 chr17 28233314 28233366 -57205114 + MER66A LTR ERV1 287 338 -140 585 103 196 0 chr17 28233445 28233542 -57204938 + AluSp SINE Alu 1 116 -197 * 652 111 0 0 chr17 28233539 28233629 -57204851 - AluJ/FLAM SINE Alu -218 94 5 349 355 57 0 chr17 28233796 28233920 -57204560 + MIR SINE MIR 20 150 -112 1221 156 0 0 chr17 28233980 28234160 -57204320 - AluSq SINE Alu 0 313 134 2431 74 0 6 chr17 28234229 28234540 -57203940 - AluY SINE Alu -2 309 1 265 337 30 46 chr17 28234884 28235054 -57203426 - MER5B DNA MER1_type -2 187 6 288 331 7 0 chr17 28235239 28235384 -57203096 + L1MC/D LINE L1 5661 5806 -2002 32 43 0 0 chr17 28235384 28235430 -57203050 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr17 28236496 28236517 -57201963 + AT_rich Low_complexity Low_complexity 1 21 0 488 220 75 29 chr17 28240030 28240203 -57198277 - MARNA DNA Mariner -346 240 60 2402 284 131 38 chr17 28240317 28241519 -57196961 - L3 LINE CR1 -12 1565 253 788 244 127 65 chr17 28241959 28242266 -57196214 - MER102a DNA MER1_type -2 328 3 2077 117 43 0 chr17 28242682 28242981 -57195499 - AluSx SINE Alu 0 312 1 30 59 0 0 chr17 28243809 28243860 -57194620 + AT_rich Low_complexity Low_complexity 1 51 0 2073 61 0 0 chr17 28245262 28245508 -57192972 + AluSc SINE Alu 1 246 -63 323 198 10 10 chr17 28245772 28245868 -57192612 + AluSc SINE Alu 204 299 0 2088 117 3 23 chr17 28245925 28246255 -57192225 - AluSx SINE Alu 0 312 1 1733 165 0 57 chr17 28246299 28246615 -57191865 + AluJb SINE Alu 1 298 -14 1664 195 3 22 chr17 28246618 28246936 -57191544 + AluJo SINE Alu 1 312 0 574 184 10 0 chr17 28247416 28247519 -57190961 - FLAM_C SINE Alu -39 104 1 333 302 47 40 chr17 28248068 28248190 -57190290 + L1ME LINE L1 5617 5742 -379 1706 168 62 7 chr17 28248190 28248481 -57189999 + AluJo SINE Alu 1 307 -5 333 302 47 40 chr17 28248481 28248507 -57189973 + L1ME LINE L1 5742 5766 -355 1887 107 111 4 chr17 28248645 28248916 -57189564 + AluSx SINE Alu 1 300 -12 2236 121 0 19 chr17 28249178 28249492 -57188988 + AluSc SINE Alu 1 308 -1 679 190 0 0 chr17 28249931 28250052 -57188428 + FLAM_C SINE Alu 21 141 -2 2302 110 3 0 chr17 28251496 28251806 -57186674 - AluSx SINE Alu -1 311 1 22 0 0 0 chr17 28252676 28252698 -57185782 + AT_rich Low_complexity Low_complexity 1 22 0 2243 102 3 10 chr17 28253928 28254233 -57184247 + AluSq SINE Alu 1 303 -10 991 158 18 6 chr17 28254502 28254666 -57183814 - FRAM SINE Alu -10 166 1 1563 188 10 30 chr17 28255095 28255399 -57183081 - AluJb SINE Alu -14 298 1 1547 86 131 57 chr17 28255592 28255837 -57182643 - AluSx SINE Alu -13 299 37 24 0 0 0 chr17 28255844 28255868 -57182612 + AT_rich Low_complexity Low_complexity 1 24 0 2027 127 6 52 chr17 28256639 28256963 -57181517 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr17 28257289 28257323 -57181157 + AT_rich Low_complexity Low_complexity 1 34 0 839 130 158 0 chr17 28257783 28257929 -57180551 - AluSg/x SINE Alu -17 293 125 2346 73 3 13 chr17 28258153 28258453 -57180027 - AluSq SINE Alu -16 297 1 1088 164 138 36 chr17 28258534 28258759 -57179721 - MER58B DNA MER1_type -2088 332 73 2189 97 17 0 chr17 28258759 28259047 -57179433 + AluSx SINE Alu 1 293 -19 1088 164 138 36 chr17 28259047 28259096 -57179384 - MER58B DNA MER1_type -2347 73 30 470 246 26 113 chr17 28259597 28259695 -57178785 - MIR3 SINE MIR -15 193 119 1952 92 19 0 chr17 28259695 28259955 -57178525 + AluY SINE Alu 1 265 -46 470 246 26 113 chr17 28259955 28260051 -57178429 - MIR3 SINE MIR -89 119 16 2521 80 0 3 chr17 28260685 28260999 -57177481 - AluSq SINE Alu 0 313 1 418 113 99 230 chr17 28261026 28261239 -57177241 + MER5A DNA MER1_type 5 189 0 198 298 206 7 chr17 28261466 28261607 -57176873 + L2 LINE L2 2849 3017 -255 293 216 250 7 chr17 28261608 28261756 -57176724 - HAL1 LINE L1 -1870 637 454 2334 92 0 0 chr17 28261975 28262268 -57176212 - AluSc SINE Alu -16 293 1 252 288 217 6 chr17 28262416 28262559 -57175921 + MIR SINE MIR 13 179 -29 2265 126 19 40 chr17 28262770 28263143 -57175337 - MLT1A1 LTR MaLR 0 365 1 421 313 49 6 chr17 28263197 28263360 -57175120 + L2 LINE L2 2040 2209 -1105 1721 176 7 3 chr17 28263354 28263660 -57174820 - AluJb SINE Alu -5 307 1 2403 156 19 89 chr17 28263728 28264292 -57174188 - L1MB5 LINE L1 -224 5950 5426 1487 170 45 131 chr17 28264286 28264500 -57173980 - L1MC4a LINE L1 -659 7149 6918 * 2493 71 0 0 chr17 28264500 28264810 -57173670 - AluSg SINE Alu 0 310 1 1487 170 45 131 chr17 28264810 28265129 -57173351 - L1MC4a LINE L1 -890 6918 6662 228 274 48 0 chr17 28265129 28265213 -57173267 + L2 LINE L2 2193 2280 -1034 2282 109 0 3 chr17 28265237 28265549 -57172931 - AluSx SINE Alu -1 311 1 387 287 218 33 chr17 28265654 28265914 -57172566 + L2 LINE L2 2511 2722 -592 2306 67 0 0 chr17 28265914 28266232 -57172248 - AluY SINE Alu 0 318 1 387 287 218 33 chr17 28266232 28266364 -57172116 + L2 LINE L2 2722 2977 -337 2109 114 7 0 chr17 28266477 28266775 -57171705 + AluSx SINE Alu 1 300 -12 965 152 9 0 chr17 28266821 28267078 -57171402 + CT-rich Low_complexity Low_complexity 2 434 0 436 280 0 77 chr17 28267111 28267153 -57171327 + L2 LINE L2 3141 3185 -87 2289 97 6 0 chr17 28267153 28267464 -57171016 + AluSp SINE Alu 1 313 0 436 280 0 77 chr17 28267464 28267564 -57170916 + L2 LINE L2 3185 3272 0 2264 81 3 10 chr17 28268102 28268411 -57170069 + AluSx SINE Alu 1 307 -5 1231 229 7 3 chr17 28271115 28271403 -57167077 + AluJb SINE Alu 1 289 -23 328 18 62 62 chr17 28271410 28271523 -57166957 + (TA)n Simple_repeat Simple_repeat 2 114 0 2554 186 103 6 chr17 28271525 28272037 -57166443 - MLT1F1 LTR MaLR 0 567 6 334 274 15 37 chr17 28272047 28272182 -57166298 + L1MC4a LINE L1 5804 5935 -1873 2225 84 0 7 chr17 28272186 28272482 -57165998 + AluY SINE Alu 1 294 -17 23 0 0 0 chr17 28272482 28272505 -57165975 + AT_rich Low_complexity Low_complexity 1 23 0 23 78 0 0 chr17 28272654 28272705 -57165775 + AT_rich Low_complexity Low_complexity 1 51 0 1481 197 25 7 chr17 28272745 28273029 -57165451 - AluJo SINE Alu -17 295 7 319 164 209 0 chr17 28273067 28273134 -57165346 + AluJ/FRAM SINE Alu 222 302 0 536 282 267 6 chr17 28273284 28273502 -57164978 + L2 LINE L2 1415 1575 -1739 180 0 0 0 chr17 28273502 28273522 -57164958 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 536 282 267 6 chr17 28273522 28273629 -57164851 + L2 LINE L2 1575 1825 -1489 2394 144 25 58 chr17 28273634 28274057 -57164423 - L1MB7 LINE L1 -21 6163 5757 1824 114 66 0 chr17 28274057 28274328 -57164152 + AluSx SINE Alu 7 295 -17 2394 144 25 58 chr17 28274328 28274390 -57164090 - L1MB7 LINE L1 -427 5757 5694 1363 152 6 132 chr17 28274510 28274680 -57163800 - AluJb SINE Alu -13 299 109 204 40 0 0 chr17 28274680 28274705 -57163775 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2153 82 0 11 chr17 28274707 28274986 -57163494 - AluSp SINE Alu -37 276 1 1363 152 6 132 chr17 28274986 28275154 -57163326 - AluJb SINE Alu -204 108 1 995 223 5 9 chr17 28275156 28275380 -57163100 - L1M4 LINE L1 -1905 4241 4019 1096 147 36 49 chr17 28275381 28275549 -57162931 - AluJb SINE Alu -5 307 141 2238 119 0 0 chr17 28275549 28275860 -57162620 - AluSx SINE Alu -1 311 1 1096 147 36 49 chr17 28275860 28275916 -57162564 - AluJb SINE Alu -171 141 86 1566 176 24 83 chr17 28275916 28276242 -57162238 - L1M4 LINE L1 -2120 4026 3682 2633 29 0 0 chr17 28276242 28276551 -57161929 - AluY SINE Alu -2 309 1 1566 176 24 83 chr17 28276551 28276602 -57161878 - L1M4 LINE L1 -2464 3682 3630 2297 84 0 0 chr17 28276602 28276899 -57161581 - AluY SINE Alu -14 297 1 1566 176 24 83 chr17 28276899 28277013 -57161467 - L1M4 LINE L1 -2516 3630 3563 2298 248 27 77 chr17 28277016 28277911 -57160569 + L2 LINE L2 1839 2688 -626 708 219 11 22 chr17 28277915 28278025 -57160455 - L1M4 LINE L1 -2187 3959 3850 1202 183 43 108 chr17 28278025 28278348 -57160132 - AluJb SINE Alu -10 302 1 708 219 11 22 chr17 28278348 28278415 -57160065 - L1M4 LINE L1 -2296 3850 3784 2336 96 3 3 chr17 28278626 28278939 -57159541 + AluSp SINE Alu 1 313 0 451 272 122 22 chr17 28278959 28279139 -57159341 - MIR SINE MIR -43 219 22 1634 150 24 14 chr17 28279729 28280023 -57158457 - AluJo SINE Alu -15 297 1 646 197 94 98 chr17 28280219 28280446 -57158034 - L1MC5 LINE L1 -36 7925 7699 180 0 0 0 chr17 28280446 28280466 -57158014 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 646 197 94 98 chr17 28280466 28280502 -57157978 - L1MC5 LINE L1 -262 7699 7664 1560 181 10 20 chr17 28280502 28280794 -57157686 + AluJb SINE Alu 1 289 -23 646 197 94 98 chr17 28280794 28281173 -57157307 - L1MC5 LINE L1 -297 7664 7190 2003 130 0 0 chr17 28281602 28281909 -57156571 - AluSq SINE Alu -1 312 6 1720 175 0 14 chr17 28281943 28282240 -57156240 - AluJo SINE Alu -2 310 18 2165 124 0 0 chr17 28282340 28282646 -57155834 - AluSx SINE Alu -6 306 1 343 256 189 30 chr17 28282795 28282959 -57155521 - MIR SINE MIR -6 256 67 1846 150 17 7 chr17 28283405 28283698 -57154782 + AluSx SINE Alu 1 296 -16 2396 41 0 14 chr17 28283854 28284148 -57154332 - AluY SINE Alu -21 290 1 358 322 142 19 chr17 28285471 28285738 -57152742 + L2 LINE L2 2919 3218 -54 526 299 51 0 chr17 28285784 28285961 -57152519 - MIR3 SINE MIR -1 207 22 2244 77 3 55 chr17 28285983 28286310 -57152170 + AluSp SINE Alu 2 311 -2 710 212 18 30 chr17 28286414 28286579 -57151901 - MIR3 SINE MIR -13 195 33 258 56 0 0 chr17 28287034 28287070 -57151410 + (CTG)n Simple_repeat Simple_repeat 3 38 0 249 314 0 0 chr17 28287275 28287345 -57151135 - L2 LINE L2 -1 3312 3243 2180 98 7 0 chr17 28287365 28287660 -57150820 + AluSx SINE Alu 15 311 -1 345 367 80 21 chr17 28288416 28288653 -57149827 - L2 LINE L2 -1 3271 3021 1240 136 0 51 chr17 28288685 28288763 -57149717 - AluJo SINE Alu -109 203 123 2434 65 0 0 chr17 28288763 28289069 -57149411 - AluY SINE Alu -5 306 1 1240 136 0 51 chr17 28289069 28289204 -57149276 - AluJo SINE Alu -189 123 1 246 343 50 0 chr17 28290315 28290414 -57148066 + L2 LINE L2 3162 3265 -7 192 288 181 19 chr17 28290564 28290779 -57147701 + L2 LINE L2 2857 3106 -166 387 300 173 38 chr17 28291509 28291603 -57146877 + L2 LINE L2 2589 2669 -603 2241 74 3 7 chr17 28291603 28291902 -57146578 - AluY SINE Alu -13 298 1 387 300 173 38 chr17 28291902 28292393 -57146087 + L2 LINE L2 2669 3256 -16 41 78 0 0 chr17 28293920 28294010 -57144470 + GC_rich Low_complexity Low_complexity 1 90 0 229 269 6 57 chr17 28294063 28294238 -57144242 + G-rich Low_complexity Low_complexity 3 168 0 185 65 32 0 chr17 28295525 28295556 -57142924 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1899 166 0 0 chr17 28297237 28297539 -57140941 + AluJb SINE Alu 1 302 -10 423 185 49 0 chr17 28298216 28298297 -57140183 + AluJ/FLAM SINE Alu 2 86 -226 231 36 0 0 chr17 28298304 28298332 -57140148 + (A)n Simple_repeat Simple_repeat 1 28 0 747 146 0 32 chr17 28299099 28299222 -57139258 + FLAM_C SINE Alu 15 133 -10 219 348 35 0 chr17 28299640 28299748 -57138732 - MIR SINE MIR -78 130 48 478 256 128 6 chr17 28300119 28300275 -57138205 + MIR SINE MIR 16 190 -72 294 333 108 21 chr17 28301110 28301160 -57137320 - MIR3 SINE MIR 0 208 164 2256 102 0 3 chr17 28301160 28301473 -57137007 - AluSq SINE Alu -1 312 1 294 333 108 21 chr17 28301473 28301608 -57136872 - MIR3 SINE MIR -44 164 7 550 314 94 0 chr17 28301653 28301844 -57136636 + MIR SINE MIR 45 253 -9 2081 141 0 0 chr17 28301901 28302207 -57136273 - AluSx SINE Alu -6 306 1 773 172 0 30 chr17 28302755 28302889 -57135591 + FLAM_C SINE Alu 2 131 -12 396 252 0 0 chr17 28302958 28303081 -57135399 + (TG)n Simple_repeat Simple_repeat 2 124 0 264 297 166 0 chr17 28304171 28304316 -57134164 + MIR SINE MIR 38 206 -56 352 239 11 61 chr17 28304804 28304984 -57133496 + (CCCTAG)n Simple_repeat Simple_repeat 5 175 0 405 218 11 62 chr17 28304995 28305174 -57133306 + (CCCTAG)n Simple_repeat Simple_repeat 6 175 0 502 245 47 0 chr17 28305988 28306094 -57132386 + MER103 DNA DNA 9 119 -47 2172 97 7 3 chr17 28306187 28306485 -57131995 + AluSx SINE Alu 1 299 -13 524 268 55 6 chr17 28306782 28306946 -57131534 + MIR SINE MIR 21 192 -70 295 241 18 98 chr17 28306966 28307016 -57131464 + MER94 DNA DNA 25 63 -71 1579 184 10 26 chr17 28307016 28307321 -57131159 + AluJo SINE Alu 1 300 -12 295 241 18 98 chr17 28307321 28307382 -57131098 + MER94 DNA DNA 63 127 -7 190 286 39 39 chr17 28307919 28307996 -57130484 - MIR SINE MIR -116 146 70 201 196 0 0 chr17 28309001 28309052 -57129428 + CT-rich Low_complexity Low_complexity 1 51 0 578 263 78 69 chr17 28310101 28310318 -57128162 + MIR SINE MIR 44 262 0 1711 162 3 7 chr17 28310458 28310754 -57127726 + AluJo SINE Alu 1 295 -17 2417 60 0 0 chr17 28310798 28311096 -57127384 - AluY SINE Alu -13 298 1 2486 54 0 6 chr17 28311484 28311797 -57126683 - AluY SINE Alu 0 311 1 536 283 113 30 chr17 28311877 28312213 -57126267 - L2 LINE L2 -2 3270 2907 307 186 88 69 chr17 28312578 28312680 -57125800 + MIR3 SINE MIR 105 208 0 271 283 52 104 chr17 28313119 28313292 -57125188 - MLT1K LTR MaLR -132 456 293 359 191 0 12 chr17 28313292 28313376 -57125104 + GA-rich Low_complexity Low_complexity 3 85 0 236 310 190 13 chr17 28314596 28314754 -57123726 + MIR SINE MIR 3 188 -74 668 278 64 0 chr17 28314942 28315115 -57123365 + MER91A DNA MER1_type 3 186 -10 456 315 0 8 chr17 28315112 28315242 -57123238 + MIR SINE MIR 23 151 -111 * 452 242 225 50 chr17 28316356 28316596 -57121884 + L2 LINE L2 2989 3270 -2 585 294 14 28 chr17 28316629 28316840 -57121640 + MIR SINE MIR 55 262 0 286 281 82 22 chr17 28318417 28318552 -57119928 - MIR SINE MIR -30 232 90 1933 174 7 0 chr17 28318895 28319205 -57119275 + AluJo SINE Alu 1 312 0 2579 87 0 0 chr17 28319225 28319537 -57118943 + AluSx SINE Alu 1 312 0 2115 139 3 3 chr17 28319574 28319877 -57118603 + AluSx SINE Alu 1 303 -9 2361 97 0 0 chr17 28319946 28320244 -57118236 - AluSg SINE Alu -12 298 1 1990 113 13 0 chr17 28320409 28320709 -57117771 + L1MB3 LINE L1 5495 5798 -385 2179 108 11 0 chr17 28320710 28320997 -57117483 + AluSx SINE Alu 14 303 -9 611 177 38 95 chr17 28321007 28321165 -57117315 + FRAM SINE Alu 1 149 -27 1969 122 43 8 chr17 28321165 28321474 -57117006 + L1MB3 LINE L1 5814 6138 -45 2247 109 7 10 chr17 28321474 28321776 -57116704 + AluSx SINE Alu 1 301 -11 1969 122 43 8 chr17 28321776 28321818 -57116662 + L1MB3 LINE L1 6138 6177 -6 2401 84 3 3 chr17 28322023 28322320 -57116160 + AluSp SINE Alu 4 300 -13 2307 67 9 61 chr17 28324119 28324447 -57114033 + AluY SINE Alu 1 311 0 2331 109 0 0 chr17 28324506 28324808 -57113672 - AluSg SINE Alu -8 302 1 1510 128 25 122 chr17 28324950 28325325 -57113155 - AluYb8 SINE Alu 0 344 1 2217 97 22 0 chr17 28325360 28325677 -57112803 + AluSx SINE Alu 1 323 0 232 285 161 0 chr17 28325696 28325826 -57112654 + MIR3 SINE MIR 10 160 -48 846 158 0 0 chr17 28325841 28325974 -57112506 - FLAM_C SINE Alu 0 133 1 251 289 78 11 chr17 28326093 28326183 -57112297 + L2 LINE L2 3121 3216 -56 330 87 0 0 chr17 28326203 28326249 -57112231 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 256 286 69 69 chr17 28326600 28326817 -57111663 + MIR SINE MIR 21 237 -25 565 262 77 0 chr17 28328205 28328373 -57110107 - MIR SINE MIR -75 187 7 2080 139 0 19 chr17 28328440 28328750 -57109730 + AluJo SINE Alu 1 304 -8 269 348 98 16 chr17 28328838 28329022 -57109458 - MIR SINE MIR -4 258 60 2319 105 0 7 chr17 28329047 28329353 -57109127 - AluSg1 SINE Alu -4 305 2 816 128 8 8 chr17 28329460 28329593 -57108887 + FLAM_C SINE Alu 1 133 0 349 164 60 0 chr17 28329643 28329710 -57108770 + L2 LINE L2 3242 3312 -1 2257 118 0 0 chr17 28329716 28330012 -57108468 + AluSq SINE Alu 4 299 -14 2113 117 0 35 chr17 28330521 28330706 -57107774 - AluSx SINE Alu -6 306 135 189 0 0 0 chr17 28330706 28330727 -57107753 + (TA)n Simple_repeat Simple_repeat 2 22 0 2113 117 0 35 chr17 28330727 28330858 -57107622 - AluSx SINE Alu -177 135 1 324 156 13 65 chr17 28331150 28331227 -57107253 - MIR SINE MIR -62 146 74 216 0 0 0 chr17 28331817 28331841 -57106639 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 331 320 154 23 chr17 28332602 28332777 -57105703 + MIR SINE MIR 15 212 -50 2034 149 10 10 chr17 28333010 28333319 -57105161 + AluJb SINE Alu 1 309 -3 219 186 0 0 chr17 28333319 28333362 -57105118 + GA-rich Low_complexity Low_complexity 1 43 0 1826 65 0 0 chr17 28333892 28334106 -57104374 + AluY SINE Alu 82 295 -16 492 256 77 0 chr17 28334146 28334302 -57104178 - MIR3 SINE MIR -10 198 31 2454 59 0 10 chr17 28334316 28334606 -57103874 + AluSc SINE Alu 1 287 -22 484 246 156 0 chr17 28334684 28334806 -57103674 + MIR SINE MIR 3 143 -119 1859 170 0 13 chr17 28334812 28335118 -57103362 + AluJb SINE Alu 1 302 -10 199 232 29 58 chr17 28335389 28335458 -57103022 + L2 LINE L2 3246 3312 -1 240 236 18 0 chr17 28335680 28335735 -57102745 + GA-rich Low_complexity Low_complexity 4 59 0 1384 150 15 108 chr17 28336475 28336808 -57101672 + AluJb SINE Alu 1 302 0 260 206 0 130 chr17 28336929 28336960 -57101520 - MER116 DNA Mariner 0 80 47 2279 102 0 14 chr17 28336960 28337253 -57101227 + AluSg SINE Alu 1 289 -21 260 206 0 130 chr17 28337253 28337313 -57101167 - MER116 DNA Mariner -33 47 1 333 0 0 0 chr17 28337354 28337391 -57101089 + (TG)n Simple_repeat Simple_repeat 1 37 0 2478 80 3 0 chr17 28337445 28337744 -57100736 + AluSp SINE Alu 1 300 -13 194 316 101 13 chr17 28337769 28337848 -57100632 + MIR SINE MIR 53 138 -124 1927 117 110 0 chr17 28337942 28338223 -57100257 - AluSx SINE Alu 0 312 1 2324 81 3 26 chr17 28338474 28338612 -57099868 + AluY SINE Alu 1 141 -170 2324 98 0 0 chr17 28338612 28338909 -57099571 + AluSg SINE Alu 6 302 -8 2324 81 3 26 chr17 28338909 28339078 -57099402 + AluY SINE Alu 141 301 -10 251 228 114 61 chr17 28339688 28339802 -57098678 + MIR3 SINE MIR 46 165 -43 271 281 0 12 chr17 28339804 28339886 -57098594 - MER102a DNA MER1_type -8 322 242 479 176 63 94 chr17 28339963 28340122 -57098358 - MIR SINE MIR -11 251 98 1982 159 3 3 chr17 28340327 28340635 -57097845 + AluJo SINE Alu 1 308 -4 232 132 0 26 chr17 28340652 28340690 -57097790 + AluJo SINE Alu 1 37 -266 2003 142 10 7 chr17 28340690 28340992 -57097488 - AluSx SINE Alu -9 303 1 1708 159 30 7 chr17 28340994 28341264 -57097216 - AluJb SINE Alu -22 290 15 1786 168 4 0 chr17 28341269 28341537 -57096943 + AluJo SINE Alu 21 289 -23 2212 116 14 43 chr17 28341554 28341926 -57096554 - L1MB3 LINE L1 -3 6180 5820 2391 74 3 10 chr17 28341926 28342225 -57096255 - AluY SINE Alu -6 305 9 2212 116 14 43 chr17 28342225 28342266 -57096214 - L1MB3 LINE L1 -363 5820 5779 483 176 84 2 chr17 28342451 28342575 -57095905 - L1MB3 LINE L1 -380 5791 5651 519 71 0 0 chr17 28342586 28342656 -57095824 - AluJ/FLAM SINE Alu -241 71 2 200 335 127 32 chr17 28342670 28342891 -57095589 + L3 LINE CR1 1312 1553 -24 893 339 102 24 chr17 28343649 28344307 -57094173 - L3 LINE CR1 -11 1566 858 25 31 0 0 chr17 28344656 28344688 -57093792 + AT_rich Low_complexity Low_complexity 1 32 0 1695 171 7 23 chr17 28344688 28344992 -57093488 - AluJo SINE Alu -13 299 1 480 0 56 14 chr17 28344992 28345063 -57093417 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2231 102 0 3 chr17 28345063 28345347 -57093133 - AluSx SINE Alu -29 283 1 228 159 0 0 chr17 28345357 28345401 -57093079 - L1ME3A LINE L1 0 6170 6127 395 335 72 22 chr17 28345822 28346100 -57092380 - L2 LINE L2 -463 2851 2560 1586 126 119 35 chr17 28346101 28346386 -57092094 + AluJo SINE Alu 1 309 -3 704 128 0 0 chr17 28346420 28346529 -57091951 + FRAM SINE Alu 67 175 -1 841 111 0 0 chr17 28346529 28346637 -57091843 + AluSq/x SINE Alu 1 108 -204 489 282 35 12 chr17 28346683 28346853 -57091627 - MIR SINE MIR -61 201 28 2714 43 0 0 chr17 28347315 28347619 -57090861 + AluY SINE Alu 1 304 -7 227 180 66 16 chr17 28347982 28348043 -57090437 + MIR SINE MIR 116 179 -83 1544 158 62 34 chr17 28348167 28348459 -57090021 + AluJb SINE Alu 3 302 -10 2285 97 17 0 chr17 28348499 28348798 -57089682 - AluSx SINE Alu -8 304 1 503 283 102 37 chr17 28348798 28349042 -57089438 + L2 LINE L2 3023 3282 -31 237 132 0 0 chr17 28350294 28350332 -57088148 + (TG)n Simple_repeat Simple_repeat 1 38 0 183 281 0 18 chr17 28350858 28350915 -57087565 - MIR3 SINE MIR -29 179 124 2354 92 3 3 chr17 28353090 28353394 -57085086 + AluSx SINE Alu 1 304 -8 2395 104 0 0 chr17 28353397 28353706 -57084774 + AluSg SINE Alu 1 309 -1 996 121 0 0 chr17 28353910 28354042 -57084438 + AluSq/x SINE Alu 2 133 -180 2083 105 14 4 chr17 28354046 28354367 -57084113 + AluSg SINE Alu 2 325 0 2440 94 3 0 chr17 28354529 28354838 -57083642 + AluSq SINE Alu 1 310 -3 2282 112 3 0 chr17 28354838 28355133 -57083347 + AluSp SINE Alu 4 299 -14 322 284 222 16 chr17 28355141 28355335 -57083145 - MIR SINE MIR -13 249 16 2265 81 4 0 chr17 28355564 28355837 -57082643 - AluSp SINE Alu -39 274 1 1761 167 28 0 chr17 28355839 28356126 -57082354 - AluJo SINE Alu -17 295 1 21 36 0 0 chr17 28356631 28356659 -57081821 + AT_rich Low_complexity Low_complexity 1 28 0 2320 116 0 0 chr17 28356783 28357093 -57081387 + AluY SINE Alu 1 310 -1 2631 51 0 0 chr17 28357244 28357540 -57080940 - AluY SINE Alu -15 296 1 637 137 145 17 chr17 28357573 28357690 -57080790 + FLAM_C SINE Alu 1 132 -1 2333 106 0 0 chr17 28358024 28358317 -57080163 - AluSx SINE Alu -19 293 1 2539 51 3 0 chr17 28359028 28359322 -57079158 - AluY SINE Alu -16 295 1 2122 109 32 0 chr17 28360331 28360616 -57077864 - AluSp SINE Alu -19 294 1 1860 179 0 7 chr17 28360662 28360959 -57077521 + AluJo SINE Alu 7 301 -11 2061 146 0 3 chr17 28360991 28361285 -57077195 - AluSx SINE Alu -19 293 1 308 85 17 17 chr17 28361742 28361801 -57076679 - AluSp/q SINE Alu -1 302 244 1018 116 0 0 chr17 28361814 28361943 -57076537 - AluSq/x SINE Alu -184 129 1 571 295 95 8 chr17 28362196 28362552 -57075928 - L1ME2 LINE L1 -258 5906 5526 222 326 77 54 chr17 28363914 28364047 -57074433 + L2 LINE L2 3133 3268 -4 2249 120 0 0 chr17 28364389 28364688 -57073792 - AluJb SINE Alu -13 299 1 1923 141 23 26 chr17 28365038 28365344 -57073136 + AluJb SINE Alu 1 305 -7 1755 155 7 14 chr17 28365353 28365650 -57072830 + AluJo SINE Alu 1 295 -17 1841 100 60 0 chr17 28365780 28366031 -57072449 - AluSg SINE Alu -44 266 1 2472 94 0 0 chr17 28366983 28367290 -57071190 + AluSx SINE Alu 1 307 -5 218 322 91 25 chr17 28367320 28367441 -57071039 + MIR SINE MIR 34 162 -100 1252 144 5 63 chr17 28367552 28367774 -57070706 + AluJb SINE Alu 87 295 -17 682 225 121 0 chr17 28368306 28368488 -57069992 + L2 LINE L2 880 1083 -2231 2373 70 0 17 chr17 28368533 28368834 -57069646 + AluY SINE Alu 1 296 -15 1916 132 20 13 chr17 28368842 28369145 -57069335 + AluJb SINE Alu 1 305 -7 306 266 236 50 chr17 28369951 28370248 -57068232 - L1M2 LINE L1 -5819 1030 679 1218 126 0 11 chr17 28370828 28371003 -57067477 + AluSx SINE Alu 1 173 -139 462 144 22 11 chr17 28371004 28371094 -57067386 - MSTD-int LTR MaLR -1643 92 2 374 140 0 0 chr17 28371096 28371153 -57067327 - MSTD LTR MaLR 0 396 340 * 552 181 0 0 chr17 28371151 28371245 -57067235 - MSTC LTR MaLR -333 95 2 * 974 257 20 8 chr17 28371245 28371461 -57067019 + MLT1C LTR MaLR 214 432 -35 834 163 0 0 chr17 28372342 28372471 -57066009 - AluJb SINE Alu -181 131 3 2090 88 92 0 chr17 28372510 28372794 -57065686 + AluY SINE Alu 1 310 -1 2322 116 0 0 chr17 28372801 28373111 -57065369 + AluSg SINE Alu 1 310 0 495 249 56 56 chr17 28373179 28373370 -57065110 - HAL1 LINE L1 -737 1770 1579 2212 101 0 20 chr17 28373370 28373667 -57064813 + AluSg SINE Alu 1 291 -19 1564 87 0 0 chr17 28373724 28373919 -57064561 + AluSc SINE Alu 1 195 -114 771 102 0 0 chr17 28373920 28374018 -57064462 - AluSg SINE Alu -210 100 3 1592 146 101 0 chr17 28374021 28374309 -57064171 - L1MC3 LINE L1 -1001 6784 6468 1504 160 22 15 chr17 28374319 28374587 -57063893 + AluJo SINE Alu 7 276 -36 802 197 7 7 chr17 28374588 28374725 -57063755 - AluJo SINE Alu -174 138 2 2137 69 0 8 chr17 28374747 28375009 -57063471 - AluSc SINE Alu -11 298 39 856 184 158 127 chr17 28375051 28375120 -57063360 - MLT1A1 LTR MaLR 0 365 300 2033 140 0 29 chr17 28375120 28375435 -57063045 - AluSx SINE Alu -6 306 1 2285 87 0 26 chr17 28375439 28375748 -57062732 - AluSq SINE Alu -4 309 9 856 184 158 127 chr17 28375748 28376027 -57062453 - MLT1A1 LTR MaLR -67 298 1 713 197 14 21 chr17 28376041 28376183 -57062297 - FLAM_C SINE Alu -1 142 2 2338 84 0 16 chr17 28376189 28376497 -57061983 - AluSx SINE Alu -9 303 1 359 268 113 66 chr17 28376497 28376710 -57061770 + MIR SINE MIR 40 262 0 240 243 56 47 chr17 28376773 28376880 -57061600 - MIR SINE MIR -82 126 19 2325 86 0 10 chr17 28377042 28377343 -57061137 - AluSx SINE Alu -14 298 1 2120 79 7 0 chr17 28377476 28377788 -57060692 + AluSx SINE Alu 2 315 0 2222 75 20 7 chr17 28380151 28380444 -57058036 - AluSq SINE Alu -16 297 1 735 199 45 40 chr17 28380871 28381047 -57057433 - AluJo SINE Alu -13 299 123 2148 103 4 0 chr17 28381069 28381350 -57057130 + AluSg SINE Alu 1 282 -28 1821 107 21 107 chr17 28381674 28382011 -57056469 + AluSx SINE Alu 1 308 -4 248 209 0 0 chr17 28382044 28382087 -57056393 - Charlie5 DNA MER1_type -2407 205 163 1499 180 27 24 chr17 28382160 28382454 -57056026 - AluJo SINE Alu -17 295 1 1471 171 109 7 chr17 28382510 28382784 -57055696 - AluSx SINE Alu -10 302 1 2073 105 14 10 chr17 28382794 28383088 -57055392 - AluSg SINE Alu -15 295 1 1186 256 243 34 chr17 28383097 28383289 -57055191 - L2 LINE L2 -609 2705 2555 1749 150 29 4 chr17 28383289 28383569 -57054911 + AluJb SINE Alu 1 287 -25 1186 256 243 34 chr17 28383569 28384177 -57054303 - L2 LINE L2 -759 2555 1737 264 220 0 0 chr17 28384832 28384882 -57053598 - MER5A DNA MER1_type -1 188 139 1691 196 3 0 chr17 28385075 28385376 -57053104 + AluJb SINE Alu 1 302 -10 2369 82 0 0 chr17 28385486 28385821 -57052659 - AluSg SINE Alu 0 335 1 820 141 122 6 chr17 28385821 28385977 -57052503 - AluSg/x SINE Alu -5 307 134 1631 126 90 4 chr17 28385977 28386254 -57052226 - AluSx SINE Alu -11 301 1 572 321 94 5 chr17 28386387 28386611 -57051869 - MIR SINE MIR -10 252 9 939 177 205 20 chr17 28386843 28386966 -57051514 - AluJo SINE Alu -1 311 212 1909 145 3 26 chr17 28386966 28387277 -57051203 - AluSx SINE Alu -8 304 1 2315 111 0 0 chr17 28387279 28387585 -57050895 - AluSg SINE Alu -4 306 1 939 177 205 20 chr17 28387585 28387712 -57050768 - AluJo SINE Alu -100 212 11 1232 157 94 35 chr17 28387806 28388061 -57050419 + AluJo SINE Alu 12 281 -31 994 232 64 19 chr17 28388274 28388541 -57049939 + AluJo SINE Alu 19 297 -15 261 83 0 0 chr17 28390306 28390342 -57048138 + (TG)n Simple_repeat Simple_repeat 2 37 0 1399 191 10 41 chr17 28390343 28390637 -57047843 - AluJo SINE Alu -27 285 1 1885 98 0 0 chr17 28391326 28391562 -57046918 - AluSq SINE Alu -77 236 1 2283 86 30 0 chr17 28391704 28392005 -57046475 - AluSx SINE Alu -2 310 1 521 210 0 0 chr17 28392200 28392300 -57046180 - AluJb SINE Alu -5 307 208 227 114 0 91 chr17 28392300 28392344 -57046136 - Alu SINE Alu -262 40 1 2256 111 0 7 chr17 28392526 28392832 -57045648 - AluSg SINE Alu -6 304 1 37 23 0 0 chr17 28393749 28393793 -57044687 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr17 28393913 28393934 -57044546 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chr17 28395414 28395460 -57043020 + (TA)n Simple_repeat Simple_repeat 1 46 0 2042 123 38 0 chr17 28396594 28396886 -57041594 + AluSx SINE Alu 1 303 -9 2154 88 10 10 chr17 28396895 28397192 -57041288 + AluSp SINE Alu 1 297 -16 1537 165 70 0 chr17 28399641 28399914 -57038566 + AluJo SINE Alu 1 292 -20 2371 82 0 0 chr17 28400193 28400486 -57037994 + AluY SINE Alu 1 293 -18 24 0 0 0 chr17 28401487 28401511 -57036969 + AT_rich Low_complexity Low_complexity 1 24 0 2088 121 0 10 chr17 28402077 28402374 -57036106 - AluSq SINE Alu -19 294 1 2353 94 7 0 chr17 28402384 28402691 -57035789 - AluY SINE Alu -2 309 1 22 35 0 0 chr17 28407395 28407424 -57031056 + AT_rich Low_complexity Low_complexity 1 29 0 2058 88 0 0 chr17 28408894 28409156 -57029324 + AluSx SINE Alu 46 307 -5 231 285 265 32 chr17 28410261 28410469 -57028011 + MIR SINE MIR 3 246 -16 675 211 32 32 chr17 28411148 28411304 -57027176 + FRAM SINE Alu 1 156 -10 2181 118 3 0 chr17 28411797 28412094 -57026386 + AluSg SINE Alu 3 300 -10 2062 103 48 0 chr17 28412949 28413241 -57025239 - AluY SINE Alu -5 306 1 291 257 101 37 chr17 28413594 28413703 -57024777 + L2 LINE L2 3149 3264 -8 532 0 0 0 chr17 28413722 28413781 -57024699 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1074 134 13 0 chr17 28413781 28413930 -57024550 - AluSg/x SINE Alu -28 282 132 2249 112 0 7 chr17 28413930 28414235 -57024245 - AluSg SINE Alu -6 304 2 329 277 24 0 chr17 28414567 28414650 -57023830 - Charlie8 DNA MER1_type -989 1428 1344 208 167 95 0 chr17 28415227 28415269 -57023211 + L2 LINE L2 3219 3264 -8 1713 129 93 11 chr17 28415546 28415825 -57022655 + AluSx SINE Alu 1 302 -10 920 157 17 45 chr17 28415897 28416051 -57022429 + MER2 DNA MER2_type 4 161 -184 1647 169 16 33 chr17 28416051 28416358 -57022122 - AluJb SINE Alu -10 302 1 2179 120 0 0 chr17 28416367 28416666 -57021814 - AluSc SINE Alu -10 299 1 1057 168 86 19 chr17 28416666 28416875 -57021605 - MER44D DNA MER2_type -116 493 1 1016 123 0 0 chr17 28416915 28417061 -57021419 - AluSg/x SINE Alu -10 300 155 932 139 36 18 chr17 28417351 28417517 -57020963 - AluJb SINE Alu -23 289 121 1565 172 0 38 chr17 28417680 28417970 -57020510 + AluJb SINE Alu 13 291 -21 1560 160 0 8 chr17 28418147 28418385 -57020095 + AluJb SINE Alu 39 274 -38 2298 85 0 22 chr17 28418446 28418762 -57019718 - AluSg1 SINE Alu 0 309 1 2251 119 0 7 chr17 28418894 28419197 -57019283 - AluSg SINE Alu -9 301 1 2270 92 0 0 chr17 28419208 28419540 -57018940 - AluY SINE Alu 0 332 1 1900 89 0 45 chr17 28419964 28420233 -57018247 + AluSx SINE Alu 19 275 -37 1969 126 3 26 chr17 28420236 28420538 -57017942 - AluSc SINE Alu -13 296 2 213 39 0 0 chr17 28420553 28420579 -57017901 + (A)n Simple_repeat Simple_repeat 1 26 0 2092 95 7 17 chr17 28420584 28420879 -57017601 + AluSq SINE Alu 3 294 -19 927 244 106 18 chr17 28420900 28421297 -57017183 - L1ME3 LINE L1 -302 5860 5429 1685 180 0 10 chr17 28421411 28421706 -57016774 + AluJb SINE Alu 1 292 -20 698 253 107 49 chr17 28421751 28422157 -57016323 - L2 LINE L2 0 3313 2883 696 194 8 0 chr17 28422157 28422281 -57016199 + FLAM_A SINE Alu 3 127 -6 2169 89 31 3 chr17 28422299 28422592 -57015888 + AluSp SINE Alu 1 301 -12 2248 105 0 10 chr17 28422639 28422945 -57015535 - AluSc SINE Alu -6 303 1 1887 145 50 7 chr17 28422983 28423280 -57015200 - AluSg SINE Alu 0 310 1 1804 96 36 16 chr17 28423676 28423926 -57014554 - AluSx SINE Alu -4 308 54 28 71 0 0 chr17 28424140 28424196 -57014284 + AT_rich Low_complexity Low_complexity 1 56 0 2198 122 26 0 chr17 28424327 28424630 -57013850 + AluSx SINE Alu 1 311 -1 2445 66 13 7 chr17 28425106 28425408 -57013072 + AluY SINE Alu 1 304 -7 1926 146 34 0 chr17 28425498 28425793 -57012687 + AluJb SINE Alu 1 305 -7 1734 139 59 31 chr17 28425992 28426280 -57012200 - AluJb SINE Alu -16 296 1 2043 153 7 0 chr17 28426288 28426582 -57011898 - AluSx SINE Alu -16 296 1 23 0 0 0 chr17 28426584 28426607 -57011873 + AT_rich Low_complexity Low_complexity 1 23 0 1062 163 59 5 chr17 28426639 28426841 -57011639 - Charlie1a DNA MER1_type -226 1229 1017 * 2810 187 59 3 chr17 28426835 28427407 -57011073 - Charlie1a DNA MER1_type -813 642 39 1119 176 21 16 chr17 28427723 28427916 -57010564 + AluJo SINE Alu 89 282 -30 1886 115 67 4 chr17 28428049 28428319 -57010161 + AluSq SINE Alu 1 287 -26 1628 166 0 80 chr17 28428378 28428704 -57009776 - AluJo SINE Alu -12 300 1 900 211 0 0 chr17 28428823 28428984 -57009496 - FRAM SINE Alu -15 161 1 2182 112 17 3 chr17 28428991 28429286 -57009194 - AluSx SINE Alu -12 300 2 447 19 0 0 chr17 28429286 28429338 -57009142 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 2248 119 0 0 chr17 28429338 28429624 -57008856 - AluSx SINE Alu -26 286 1 2221 125 0 3 chr17 28429671 28429974 -57008506 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 28429974 28429995 -57008485 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1889 133 37 0 chr17 28429995 28430266 -57008214 - AluSg SINE Alu -29 281 1 207 100 0 0 chr17 28430268 28430298 -57008182 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1857 130 14 25 chr17 28430303 28430588 -57007892 - AluJo SINE Alu -30 282 1 2067 140 3 10 chr17 28430855 28431155 -57007325 - AluSq SINE Alu -15 298 1 23 33 0 0 chr17 28431580 28431610 -57006870 + AT_rich Low_complexity Low_complexity 1 30 0 316 270 54 0 chr17 28431638 28431749 -57006731 + L1M4 LINE L1 4605 4721 -1425 211 264 94 0 chr17 28431785 28431838 -57006642 + L2 LINE L2 3203 3260 -12 188 333 26 26 chr17 28432527 28432605 -57005875 - L2 LINE L2 -1 3271 3194 2051 119 14 0 chr17 28432838 28433124 -57005356 - AluSx SINE Alu -18 294 5 2007 134 17 3 chr17 28433142 28433434 -57005046 - AluSx SINE Alu -12 300 5 2230 115 0 3 chr17 28433976 28434271 -57004209 + AluSx SINE Alu 1 294 -18 2327 96 3 3 chr17 28434375 28434677 -57003803 + AluSc SINE Alu 1 302 -7 631 239 8 0 chr17 28435156 28435286 -57003194 - FLAM_A SINE Alu -1 132 2 285 260 147 80 chr17 28435346 28435423 -57003057 + MIR SINE MIR 77 147 -115 1880 159 7 0 chr17 28435423 28435712 -57002768 + AluJo SINE Alu 1 291 -21 285 260 147 80 chr17 28435712 28435784 -57002696 + MIR SINE MIR 147 236 -26 373 194 15 0 chr17 28435903 28435970 -57002510 + AluSp SINE Alu 124 191 -112 1970 131 31 3 chr17 28436045 28436335 -57002145 + AluJb SINE Alu 5 302 -10 851 150 0 8 chr17 28436683 28436816 -57001664 + FLAM_C SINE Alu 1 132 -1 2270 103 7 3 chr17 28437181 28437491 -57000989 - AluSx SINE Alu -1 311 1 225 242 0 16 chr17 28437702 28437764 -57000716 + MIR SINE MIR 152 212 -50 3322 33 0 8 chr17 28438084 28438481 -56999999 - L1PA4 LINE L1 -3 6152 5759 1714 174 7 11 chr17 28438966 28439269 -56999211 + AluJo SINE Alu 1 302 0 890 115 0 8 chr17 28439602 28439724 -56998756 + FLAM_C SINE Alu 1 121 -12 25 0 0 0 chr17 28439729 28439754 -56998726 + AT_rich Low_complexity Low_complexity 1 25 0 2336 101 0 19 chr17 28439791 28440108 -56998372 - AluSx SINE Alu -1 311 1 22 43 0 21 chr17 28440111 28440125 -56998355 + AT_rich Low_complexity Low_complexity 1 14 -32 770 178 0 0 chr17 28440125 28440243 -56998237 - FLAM_C SINE Alu -15 118 1 22 43 0 21 chr17 28440243 28440275 -56998205 + AT_rich Low_complexity Low_complexity 14 46 0 2055 100 50 30 chr17 28440280 28440526 -56997954 + AluSq SINE Alu 1 256 -57 194 81 27 0 chr17 28440526 28440563 -56997917 + (CACTT)n Simple_repeat Simple_repeat 5 42 0 2055 100 50 30 chr17 28440563 28440617 -56997863 + AluSq SINE Alu 256 307 -6 2297 112 0 0 chr17 28440617 28440911 -56997569 + AluSx SINE Alu 1 294 -18 275 95 0 0 chr17 28440911 28440953 -56997527 + L1MA4 LINE L1 6079 6120 -180 1155 127 73 54 chr17 28440953 28441158 -56997322 + AluJo SINE Alu 87 295 -17 1076 108 81 11 chr17 28441160 28441345 -56997135 + L1MA4 LINE L1 6103 6300 0 308 183 77 48 chr17 28441347 28441451 -56997029 - HAL1b LINE L1 -128 1220 1114 2148 132 0 10 chr17 28441759 28442070 -56996410 - AluSg SINE Alu -2 308 1 22 35 0 0 chr17 28442225 28442254 -56996226 + AT_rich Low_complexity Low_complexity 1 29 0 2269 93 0 50 chr17 28443016 28443337 -56995143 + AluSq SINE Alu 1 305 -8 352 239 84 59 chr17 28443402 28443641 -56994839 + L1ME3A LINE L1 895 1139 -4980 226 267 40 50 chr17 28443770 28443871 -56994609 + MLT1J LTR MaLR 110 209 -302 349 200 178 0 chr17 28443912 28444002 -56994478 + MLT1L LTR MaLR 340 445 -170 2170 108 3 46 chr17 28444022 28444347 -56994133 - AluSq SINE Alu -2 311 1 1035 90 0 8 chr17 28444351 28444484 -56993996 - AluSq/x SINE Alu -180 132 1 533 309 104 30 chr17 28444509 28445008 -56993472 - L1 LINE L1 -914 5232 4697 932 136 0 0 chr17 28445040 28445165 -56993315 - FLAM_C SINE Alu -18 125 1 1999 168 0 0 chr17 28445241 28445551 -56992929 - AluJb SINE Alu -2 310 1 1958 161 7 0 chr17 28445748 28446046 -56992434 - AluJb SINE Alu -11 301 2 1634 101 3 80 chr17 28446085 28446332 -56992148 - L1PA16 LINE L1 -110 6056 5832 2116 99 26 26 chr17 28446332 28446644 -56991836 - AluSx SINE Alu 0 312 1 1634 101 3 80 chr17 28446644 28446684 -56991796 - L1PA16 LINE L1 -334 5832 5791 317 313 112 27 chr17 28446736 28446960 -56991520 + L1ME3A LINE L1 2192 2434 -3695 465 273 88 71 chr17 28447075 28447202 -56991278 + L1ME3A LINE L1 5476 5599 -554 2384 106 0 0 chr17 28447202 28447504 -56990976 + AluSx SINE Alu 3 304 -8 465 273 88 71 chr17 28447504 28447793 -56990687 + L1ME3A LINE L1 5599 5838 -315 21 36 0 0 chr17 28447949 28447977 -56990503 + AT_rich Low_complexity Low_complexity 1 28 0 1701 128 124 0 chr17 28447984 28448249 -56990231 + AluSx SINE Alu 1 298 -4 1340 135 90 132 chr17 28448314 28448625 -56989855 - AluJo SINE Alu -10 302 5 2387 239 68 55 chr17 28448683 28449686 -56988794 - HAL1b LINE L1 -270 1078 60 2447 80 0 10 chr17 28449686 28449998 -56988482 - AluSc SINE Alu 0 309 1 2387 239 68 55 chr17 28449998 28450059 -56988421 - HAL1b LINE L1 -1288 60 1 2365 97 0 0 chr17 28450179 28450478 -56988002 + AluSx SINE Alu 1 299 -13 233 257 129 0 chr17 28450579 28450649 -56987831 - HAL1 LINE L1 -856 1651 1573 1964 153 0 25 chr17 28450654 28450974 -56987506 - AluJb SINE Alu 0 312 1 22 0 0 0 chr17 28450988 28451010 -56987470 + AT_rich Low_complexity Low_complexity 1 22 0 379 245 115 46 chr17 28451016 28451277 -56987203 - HAL1 LINE L1 -1415 1092 814 2213 118 0 0 chr17 28451524 28451812 -56986668 - AluSx SINE Alu -24 288 1 380 258 40 96 chr17 28451927 28451963 -56986517 + L1MEd LINE L1 3056 3092 -3037 1761 61 0 9 chr17 28451963 28452175 -56986305 + AluY SINE Alu 1 210 -101 380 258 40 96 chr17 28452175 28452203 -56986277 + L1MEd LINE L1 3092 3120 -3009 1407 183 30 50 chr17 28452203 28452504 -56985976 + AluJo SINE Alu 1 295 -17 380 258 40 96 chr17 28452504 28452740 -56985740 + L1MEd LINE L1 3120 3340 -2789 24 0 0 0 chr17 28452740 28452764 -56985716 + AT_rich Low_complexity Low_complexity 1 24 0 791 119 0 98 chr17 28452764 28452789 -56985691 - FLAM_C SINE Alu -173 129 103 1972 137 7 0 chr17 28452789 28453067 -56985413 + AluSx SINE Alu 1 280 -32 341 0 45 0 chr17 28453067 28453111 -56985369 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 791 119 0 98 chr17 28453111 28453227 -56985253 - FLAM_C SINE Alu -197 105 1 263 115 0 19 chr17 28453309 28453327 -56985153 + (GAA)n Simple_repeat Simple_repeat 2 19 -33 866 132 16 0 chr17 28453327 28453456 -56985024 + FLAM_C SINE Alu 3 133 0 263 115 0 19 chr17 28453456 28453489 -56984991 + (GAA)n Simple_repeat Simple_repeat 19 52 0 2177 97 7 17 chr17 28453503 28453832 -56984648 + AluSq SINE Alu 1 326 0 23 78 0 0 chr17 28454142 28454193 -56984287 + AT_rich Low_complexity Low_complexity 1 51 0 2026 138 3 3 chr17 28454309 28454607 -56983873 + AluSx SINE Alu 1 298 -14 1138 124 0 0 chr17 28454609 28454770 -56983710 + AluSg/x SINE Alu 152 312 0 22 0 0 0 chr17 28454774 28454796 -56983684 + AT_rich Low_complexity Low_complexity 1 22 0 1031 91 12 48 chr17 28454888 28455053 -56983427 - AluSp/q SINE Alu -1 312 154 43 99 0 0 chr17 28455163 28455304 -56983176 + AT_rich Low_complexity Low_complexity 1 141 0 304 191 0 0 chr17 28455308 28455371 -56983109 - FLAM_A SINE Alu 0 133 71 1444 118 10 10 chr17 28455374 28455577 -56982903 - AluSx SINE Alu -109 203 1 407 226 113 16 chr17 28455581 28455705 -56982775 + L2 LINE L2 3178 3313 0 1998 142 14 3 chr17 28455718 28456043 -56982437 + AluSx SINE Alu 1 328 0 697 199 138 69 chr17 28456055 28456261 -56982219 + AluJo SINE Alu 50 277 -35 2468 97 0 0 chr17 28456261 28456571 -56981909 + AluSg SINE Alu 1 310 0 697 199 138 69 chr17 28456571 28456610 -56981870 + AluJo SINE Alu 277 312 0 1849 140 186 14 chr17 28456673 28457038 -56981442 + MSTA LTR MaLR 1 428 0 9350 137 25 38 chr17 28457040 28458638 -56979842 + MSTA-int LTR MaLR 3 1580 0 1837 134 171 45 chr17 28458638 28458945 -56979535 + MSTA LTR MaLR 1 366 -62 2189 126 3 0 chr17 28458945 28459246 -56979234 - AluSx SINE Alu -10 302 1 1837 134 171 45 chr17 28459246 28459318 -56979162 + MSTA LTR MaLR 366 428 0 497 309 24 6 chr17 28459323 28459488 -56978992 + L1MEd LINE L1 220 387 -5732 1291 133 69 39 chr17 28459621 28459662 -56978818 - MSTA LTR MaLR 0 426 388 2201 128 0 7 chr17 28459662 28459968 -56978512 + AluSx SINE Alu 1 304 -8 1291 133 69 39 chr17 28459968 28460159 -56978321 - MSTA LTR MaLR -38 388 187 246 87 0 0 chr17 28460168 28460214 -56978266 - LTR66 LTR ERVL -171 439 394 243 146 0 0 chr17 28460214 28460255 -56978225 + (TA)n Simple_repeat Simple_repeat 1 41 0 2432 92 0 3 chr17 28460255 28460558 -56977922 - AluSc SINE Alu -7 302 1 29 0 0 0 chr17 28460563 28460592 -56977888 + AT_rich Low_complexity Low_complexity 1 29 0 1399 129 0 0 chr17 28460599 28460785 -56977695 - AluSq SINE Alu -127 186 1 1344 121 15 0 chr17 28460786 28460984 -56977496 - MSTA LTR MaLR -227 201 1 634 261 63 8 chr17 28461091 28461344 -56977136 + L1MEd LINE L1 638 904 -5215 26 74 0 0 chr17 28461372 28461426 -56977054 + AT_rich Low_complexity Low_complexity 1 54 0 2329 83 3 0 chr17 28461428 28461718 -56976762 + AluSp SINE Alu 3 293 -20 21 36 0 0 chr17 28461756 28461784 -56976696 + AT_rich Low_complexity Low_complexity 1 28 0 1277 166 64 58 chr17 28461811 28461876 -56976604 - Charlie1b DNA MER1_type -2446 315 252 2443 49 7 0 chr17 28461876 28462161 -56976319 - AluY SINE Alu -24 287 1 1277 166 64 58 chr17 28462161 28462408 -56976072 - Charlie1b DNA MER1_type -2509 252 1 257 337 0 0 chr17 28462409 28462501 -56975979 - MIR3 SINE MIR -49 159 68 48 0 0 0 chr17 28462637 28462685 -56975795 + AT_rich Low_complexity Low_complexity 1 48 0 2125 116 0 17 chr17 28463648 28463788 -56974692 + AluSx SINE Alu 1 142 -170 189 0 0 0 chr17 28463788 28463809 -56974671 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2125 116 0 17 chr17 28463809 28463970 -56974510 + AluSx SINE Alu 142 297 -15 276 276 28 21 chr17 28463977 28464122 -56974358 + L1MEd LINE L1 955 1100 -5019 1089 158 187 26 chr17 28464131 28464404 -56974076 - MER33 DNA MER1_type -7 317 1 460 241 41 28 chr17 28464404 28464549 -56973931 + L1MEd LINE L1 1110 1256 -4863 313 204 102 10 chr17 28464653 28464751 -56973729 + HAL1 LINE L1 1530 1636 -871 487 76 0 152 chr17 28465005 28465064 -56973416 + MER41D LTR ERV1 2 44 -513 2343 95 0 0 chr17 28465064 28465359 -56973121 - AluSq SINE Alu -18 295 1 487 76 0 152 chr17 28465359 28465391 -56973089 + MER41D LTR ERV1 44 79 -478 2216 101 0 3 chr17 28465395 28465683 -56972797 + AluSq SINE Alu 7 293 -20 1230 101 25 0 chr17 28465683 28465842 -56972638 + AluSp SINE Alu 134 296 -17 2783 146 15 40 chr17 28465846 28466324 -56972156 + MER41D LTR ERV1 92 557 0 2175 114 7 0 chr17 28466653 28466959 -56971521 + AluSp SINE Alu 1 308 -5 211 261 72 112 chr17 28467105 28467191 -56971289 - MIR SINE MIR -2 260 172 638 207 66 0 chr17 28467191 28467312 -56971168 + FLAM_A SINE Alu 1 129 -4 211 261 72 112 chr17 28467312 28467342 -56971138 - MIR SINE MIR -90 172 142 494 102 0 136 chr17 28467342 28467406 -56971074 - L1MB3 LINE L1 -7 6176 6134 2238 118 0 9 chr17 28467406 28467721 -56970759 + AluSx SINE Alu 1 312 0 494 102 0 136 chr17 28467721 28467774 -56970706 - L1MB3 LINE L1 -49 6134 6075 211 261 72 112 chr17 28467774 28467905 -56970575 - MIR SINE MIR -120 142 22 1836 125 6 83 chr17 28467968 28468112 -56970368 + AluJo SINE Alu 1 155 -157 2341 85 0 0 chr17 28468112 28468405 -56970075 + AluY SINE Alu 6 298 -13 1836 125 6 83 chr17 28468405 28468562 -56969918 + AluJo SINE Alu 155 276 -36 2265 106 3 0 chr17 28468562 28468854 -56969626 - AluSx SINE Alu -19 293 1 1836 125 6 83 chr17 28468854 28468887 -56969593 + AluJo SINE Alu 276 310 -2 29 28 0 0 chr17 28468888 28468924 -56969556 + AT_rich Low_complexity Low_complexity 1 36 0 217 326 41 62 chr17 28468939 28469257 -56969223 - L2 LINE L2 -168 3145 2782 267 81 0 27 chr17 28469518 28469555 -56968925 - Alu SINE Alu -254 48 13 342 232 24 0 chr17 28469559 28469641 -56968839 - MIR SINE MIR -110 152 69 2230 107 0 7 chr17 28469730 28470020 -56968460 - AluSg SINE Alu -22 288 1 2288 117 6 3 chr17 28470825 28471159 -56967321 + MER1B DNA MER1_type 3 337 0 1374 102 16 0 chr17 28471224 28471410 -56967070 - AluJo SINE Alu -118 194 6 278 339 31 16 chr17 28471414 28471541 -56966939 - L3 LINE CR1 -36 1541 1413 195 310 95 32 chr17 28471735 28471893 -56966587 - L3 LINE CR1 -157 1420 1253 240 143 0 0 chr17 28471942 28471984 -56966496 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 203 215 15 46 chr17 28472654 28472719 -56965761 + (CGG)n Simple_repeat Simple_repeat 1 63 0 24 32 0 0 chr17 28472796 28472827 -56965653 + GC_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 28472904 28472925 -56965555 + GC_rich Low_complexity Low_complexity 1 21 0 2332 113 0 0 chr17 28476042 28476352 -56962128 - AluSg SINE Alu 0 310 1 2186 107 3 28 chr17 28476529 28476846 -56961634 - AluSq SINE Alu -4 309 1 687 233 78 5 chr17 28476854 28477047 -56961433 - MIR SINE MIR -42 220 14 2006 152 0 0 chr17 28477296 28477585 -56960895 + AluJo SINE Alu 1 289 -23 1308 161 0 0 chr17 28478242 28478434 -56960046 - AluSq SINE Alu -121 192 1 2167 95 0 39 chr17 28478434 28478740 -56959740 - AluSx SINE Alu -18 294 1 671 158 0 47 chr17 28478953 28479080 -56959400 + FLAM_C SINE Alu 5 125 -8 1265 181 4 9 chr17 28479096 28479322 -56959158 + AluJb SINE Alu 86 310 -2 1794 163 33 0 chr17 28479906 28480203 -56958277 - AluJb SINE Alu 0 306 1 912 181 94 0 chr17 28480253 28480424 -56958056 + MER58A DNA MER1_type 38 224 0 1047 287 161 39 chr17 28480511 28481225 -56957255 + L3 LINE CR1 522 1322 -255 434 262 55 48 chr17 28483489 28483634 -56954846 - L2 LINE L2 -16 3297 3152 2628 53 0 3 chr17 28484037 28484339 -56954141 + AluY SINE Alu 3 303 -8 2210 116 0 10 chr17 28484546 28484712 -56953768 - AluSq SINE Alu -13 300 137 2415 62 0 7 chr17 28484712 28485004 -56953476 - AluY SINE Alu -21 290 1 2210 116 0 10 chr17 28485004 28485140 -56953340 - AluSq SINE Alu -176 137 1 1897 155 14 0 chr17 28485413 28485709 -56952771 - AluJb SINE Alu -12 300 1 2316 104 0 0 chr17 28485975 28486272 -56952208 - AluSg SINE Alu -13 297 1 272 188 29 14 chr17 28487013 28487082 -56951398 + L2 LINE L2 2996 3065 -248 1065 132 11 40 chr17 28487111 28487285 -56951195 + AluSg/x SINE Alu 126 294 -18 246 62 0 0 chr17 28487285 28487317 -56951163 + (TA)n Simple_repeat Simple_repeat 2 33 0 1557 172 20 0 chr17 28487443 28487560 -56950920 - AluJb SINE Alu -63 249 136 225 0 0 0 chr17 28487560 28487585 -56950895 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1557 172 20 0 chr17 28487585 28487711 -56950769 - AluJb SINE Alu -176 136 1 1617 124 151 0 chr17 28487842 28488100 -56950380 - AluSx SINE Alu -5 297 1 1597 197 3 10 chr17 28488238 28488532 -56949948 - AluJo SINE Alu -18 294 3 2128 75 65 0 chr17 28488666 28488944 -56949536 + AluY SINE Alu 1 296 -15 2281 98 0 3 chr17 28489255 28489550 -56948930 - AluSg SINE Alu -16 294 1 1456 118 15 0 chr17 28489568 28489772 -56948708 + AluSq SINE Alu 104 310 -3 2318 108 0 3 chr17 28490855 28491161 -56947319 - AluSp SINE Alu -8 305 1 29 0 0 0 chr17 28491520 28491549 -56946931 + AT_rich Low_complexity Low_complexity 1 29 0 714 75 47 9 chr17 28491549 28491655 -56946825 - HY1 scRNA scRNA -1 111 2 1957 144 29 0 chr17 28493288 28493586 -56944894 - AluSx SINE Alu 0 306 1 318 138 154 0 chr17 28493659 28493724 -56944756 + MER116 DNA Mariner 1 75 -5 3712 153 97 51 chr17 28493733 28493865 -56944615 - L1MB7 LINE L1 -2 6182 6058 2201 120 0 3 chr17 28493865 28494164 -56944316 + AluSx SINE Alu 1 298 -14 2174 125 0 3 chr17 28494173 28494470 -56944010 - AluSx SINE Alu -16 296 1 3712 153 97 51 chr17 28494470 28495100 -56943380 - L1MB7 LINE L1 -133 6051 5452 2169 108 7 0 chr17 28495100 28495416 -56943064 - AluSg SINE Alu 0 318 1 2386 89 7 0 chr17 28495416 28495719 -56942761 - AluSx SINE Alu -7 305 1 3712 153 97 51 chr17 28495719 28495785 -56942695 - L1MB7 LINE L1 -731 5453 5302 1130 148 0 22 chr17 28495786 28495968 -56942512 - AluJo SINE Alu -17 295 118 2539 121 41 0 chr17 28495980 28496393 -56942087 - L1PA13 LINE L1 0 6163 5734 1224 192 46 7 chr17 28496393 28496687 -56941793 - L1MB7 LINE L1 -872 5274 4966 352 233 103 9 chr17 28498004 28498120 -56940360 + MIR SINE MIR 24 150 -112 2036 150 26 7 chr17 28498172 28498478 -56940002 - AluJb SINE Alu 0 312 1 1808 121 85 18 chr17 28498478 28498760 -56939720 - AluSg SINE Alu -9 301 1 269 306 10 10 chr17 28499464 28499562 -56938918 + L1ME LINE L1 5729 5826 -295 1541 169 35 24 chr17 28500050 28500340 -56938140 - AluJb SINE Alu -18 294 2 2016 121 0 54 chr17 28500399 28500713 -56937767 - AluSx SINE Alu -15 297 1 2228 108 3 0 chr17 28500715 28501010 -56937470 - AluSx SINE Alu -16 296 1 195 42 0 0 chr17 28501010 28501034 -56937446 + (T)n Simple_repeat Simple_repeat 1 24 0 2178 97 7 10 chr17 28501047 28501345 -56937135 + AluSx SINE Alu 1 297 -15 1129 177 19 9 chr17 28501370 28501456 -56937024 - AluJo SINE Alu -91 221 137 2160 107 0 20 chr17 28501456 28501755 -56936725 - AluSp SINE Alu -19 294 2 1129 177 19 9 chr17 28501755 28501883 -56936597 - AluJo SINE Alu -175 137 5 204 184 61 0 chr17 28501890 28501939 -56936541 + MIR3 SINE MIR 156 207 -1 1367 147 110 33 chr17 28552750 28553049 -56885431 + MER33 DNA MER1_type 1 322 -2 1931 99 39 0 chr17 28554177 28554460 -56884020 - AluSx SINE Alu -18 294 1 2470 67 3 10 chr17 28554676 28554988 -56883492 - AluSq SINE Alu -3 310 1 22 56 0 0 chr17 28556112 28556148 -56882332 + GC_rich Low_complexity Low_complexity 1 36 0 25 95 0 0 chr17 28556282 28556356 -56882124 + GC_rich Low_complexity Low_complexity 1 74 0 299 216 0 52 chr17 28556525 28556622 -56881858 + G-rich Low_complexity Low_complexity 6 97 0 291 54 0 0 chr17 28556658 28556695 -56881785 + (CCG)n Simple_repeat Simple_repeat 1 37 0 35 63 0 0 chr17 28556713 28556776 -56881704 + GC_rich Low_complexity Low_complexity 1 63 0 309 205 13 73 chr17 28556943 28557094 -56881386 + G-rich Low_complexity Low_complexity 2 143 0 21 57 0 0 chr17 28557230 28557265 -56881215 + GC_rich Low_complexity Low_complexity 1 35 0 1709 151 0 75 chr17 28566806 28567125 -56871355 + AluJo SINE Alu 4 298 -14 256 222 20 61 chr17 28568018 28568117 -56870363 + MIR SINE MIR 23 117 -91 2067 112 49 0 chr17 28568575 28568861 -56869619 + AluSg SINE Alu 1 300 -10 897 138 23 0 chr17 28568873 28569003 -56869477 + FLAM_A SINE Alu 1 133 0 2429 94 0 0 chr17 28569006 28569314 -56869166 + AluSg SINE Alu 1 308 -2 1837 176 0 19 chr17 28569329 28569647 -56868833 + AluJb SINE Alu 1 312 0 2480 76 0 10 chr17 28570377 28570681 -56867799 + AluY SINE Alu 1 301 -10 845 140 100 0 chr17 28570690 28570840 -56867640 + L1MB5 LINE L1 5577 5741 -433 232 27 54 0 chr17 28570843 28570880 -56867600 + (ATG)n Simple_repeat Simple_repeat 3 41 0 4340 133 50 67 chr17 28570884 28571795 -56866685 + MER21A LTR ERV1 29 924 -7 2091 169 51 14 chr17 28571801 28572215 -56866265 + L1MB5 LINE L1 5738 6166 -8 185 284 45 45 chr17 28574135 28574223 -56864257 - L2 LINE L2 -190 3082 2995 203 342 122 57 chr17 28574348 28574839 -56863641 + L2 LINE L2 2247 2769 -545 301 301 172 12 chr17 28575150 28575313 -56863167 + L1MEd LINE L1 356 544 -5661 337 292 193 0 chr17 28575397 28575589 -56862891 + L1MEd LINE L1 1432 1660 -4736 856 163 0 0 chr17 28575589 28575718 -56862762 + AluJo SINE Alu 1 129 -173 509 290 103 42 chr17 28576145 28576455 -56862025 + L1MEd LINE L1 2110 2438 -3958 967 204 0 0 chr17 28576488 28576650 -56861830 + AluJo SINE Alu 138 299 -3 1845 169 0 38 chr17 28576769 28577082 -56861398 + AluJb SINE Alu 1 301 -11 404 270 123 37 chr17 28577104 28577267 -56861213 + L1MEd LINE L1 2726 2902 -3313 1198 221 46 87 chr17 28577289 28577545 -56860935 + MLT1A2 LTR MaLR 1 266 -108 2388 97 0 0 chr17 28577545 28577845 -56860635 - AluSg SINE Alu -9 301 2 1198 221 46 87 chr17 28577845 28577934 -56860546 + MLT1A2 LTR MaLR 266 331 -43 2045 137 0 3 chr17 28577934 28578227 -56860253 - AluSx SINE Alu -20 292 1 1198 221 46 87 chr17 28578227 28578270 -56860210 + MLT1A2 LTR MaLR 331 374 0 443 227 184 32 chr17 28578296 28578481 -56859999 - MIR SINE MIR -48 214 2 284 271 0 0 chr17 28578565 28578635 -56859845 + L2 LINE L2 3244 3313 0 2232 73 0 14 chr17 28579228 28579503 -56858977 - AluSc SINE Alu -3 306 36 490 303 113 10 chr17 28579622 28579817 -56858663 - MIR SINE MIR -13 249 35 203 259 19 0 chr17 28580800 28580854 -56857626 + CT-rich Low_complexity Low_complexity 3 57 0 1470 189 64 14 chr17 28580877 28581157 -56857323 - AluJo SINE Alu -18 294 1 2251 107 3 3 chr17 28581670 28581969 -56856511 + AluSq SINE Alu 1 299 -14 404 258 88 88 chr17 28582638 28582820 -56855660 + L2 LINE L2 3112 3293 -20 553 130 11 11 chr17 28583471 28583563 -56854917 - AluJo SINE Alu -4 308 217 902 136 49 49 chr17 28583564 28583611 -56854869 - AluJo SINE Alu -143 169 123 2289 131 3 0 chr17 28583611 28583917 -56854563 + AluSg1 SINE Alu 1 307 -2 902 136 49 49 chr17 28583917 28584031 -56854449 - AluJo SINE Alu -188 124 8 21 0 0 0 chr17 28584069 28584090 -56854390 + AT_rich Low_complexity Low_complexity 1 21 0 527 265 164 27 chr17 28584525 28584744 -56853736 + MIR SINE MIR 9 257 -5 1456 187 82 0 chr17 28584969 28585237 -56853243 - AluJo SINE Alu -22 290 1 456 213 103 84 chr17 28587115 28587270 -56851210 - MER5B DNA MER1_type 0 178 21 376 272 160 0 chr17 28587838 28587963 -56850517 - L2 LINE L2 -1 3271 3127 200 208 0 21 chr17 28589026 28589074 -56849406 + GA-rich Low_complexity Low_complexity 4 50 0 212 275 12 0 chr17 28589115 28589195 -56849285 + (CGG)n Simple_repeat Simple_repeat 2 82 0 23 0 0 0 chr17 28589536 28589559 -56848921 + AT_rich Low_complexity Low_complexity 1 23 0 982 134 0 0 chr17 28591314 28591448 -56847032 + AluSg SINE Alu 1 134 -176 2390 110 0 0 chr17 28591448 28591758 -56846722 + AluSg SINE Alu 1 310 0 2567 51 3 0 chr17 28592472 28592767 -56845713 - AluY SINE Alu -15 296 1 204 339 0 0 chr17 28592873 28592932 -56845548 + GA-rich Low_complexity Low_complexity 4 62 0 298 312 128 8 chr17 28592958 28593083 -56845397 - MIR3 SINE MIR -49 159 20 1300 144 89 0 chr17 28593263 28593465 -56845015 + AluJb SINE Alu 85 304 -8 627 276 16 56 chr17 28593465 28593715 -56844765 + MIR SINE MIR 22 261 -1 1944 141 3 39 chr17 28594045 28594214 -56844266 - AluJo SINE Alu -11 301 146 2350 90 10 0 chr17 28594214 28594513 -56843967 - AluSg SINE Alu -8 302 1 1944 141 3 39 chr17 28594513 28594655 -56843825 - AluJo SINE Alu -166 146 1 299 53 0 0 chr17 28595222 28595260 -56843220 - U2 snRNA snRNA -150 38 1 579 320 99 32 chr17 28595518 28595921 -56842559 + L2 LINE L2 2826 3255 -17 879 217 0 0 chr17 28596311 28596472 -56842008 - AluJb SINE Alu -18 294 134 1876 166 10 19 chr17 28597163 28597471 -56841009 + AluJo SINE Alu 1 305 -7 2353 95 0 0 chr17 28597492 28597788 -56840692 - AluSg SINE Alu -14 296 1 309 109 0 0 chr17 28598086 28598132 -56840348 + (TG)n Simple_repeat Simple_repeat 2 47 0 1771 215 59 27 chr17 28598158 28598647 -56839833 + MLT1D LTR MaLR 1 505 0 396 215 137 68 chr17 28599806 28600011 -56838469 + MIR SINE MIR 35 253 -9 1992 151 0 0 chr17 28600175 28600460 -56838020 + AluJo SINE Alu 7 291 -21 421 317 71 47 chr17 28600620 28601002 -56837478 + MLT1K LTR MaLR 39 429 -159 2586 47 10 0 chr17 28602096 28602395 -56836085 + AluY SINE Alu 1 302 -9 490 317 274 22 chr17 28602663 28603443 -56835037 + L2 LINE L2 2001 2977 -337 27 33 0 50 chr17 28603792 28603832 -56834648 + AT_rich Low_complexity Low_complexity 1 39 -18 1787 171 0 20 chr17 28603832 28604124 -56834356 - AluJo SINE Alu -26 286 1 27 33 0 50 chr17 28604124 28604143 -56834337 + AT_rich Low_complexity Low_complexity 39 57 0 2255 84 0 18 chr17 28605116 28605428 -56833052 + AluSg SINE Alu 1 307 0 2422 97 0 6 chr17 28605674 28605985 -56832495 - AluSx SINE Alu -3 309 1 1323 170 23 5 chr17 28606911 28607129 -56831351 + MER58A DNA MER1_type 1 222 -2 369 270 98 49 chr17 28607476 28607639 -56830841 + HAL1b LINE L1 759 929 -419 572 229 18 12 chr17 28607654 28607824 -56830656 + MER104 DNA Tc2 3 173 -7 1762 159 0 60 chr17 28607933 28608248 -56830232 - AluJo SINE Alu -16 296 1 3519 80 2 14 chr17 28608290 28608777 -56829703 + L1PA10 LINE L1 5688 6168 0 768 145 0 0 chr17 28608808 28608925 -56829555 + FLAM_C SINE Alu 1 117 -16 423 0 0 0 chr17 28608925 28608972 -56829508 + (CA)n Simple_repeat Simple_repeat 2 48 0 1663 194 167 29 chr17 28609032 28609476 -56829004 - MLT1D LTR MaLR 0 505 1 4418 168 40 15 chr17 28609610 28609710 -56828770 + L1MB8 LINE L1 5103 5199 -979 1973 125 62 0 chr17 28609710 28609999 -56828481 + AluSx SINE Alu 1 307 -5 4418 168 40 15 chr17 28609999 28610290 -56828190 + L1MB8 LINE L1 5199 5481 -697 2428 93 7 0 chr17 28610290 28610591 -56827889 + AluSx SINE Alu 1 303 -9 4418 168 40 15 chr17 28610591 28611249 -56827231 + L1MB8 LINE L1 5481 6172 -6 238 284 25 12 chr17 28611319 28611400 -56827080 + MIR SINE MIR 181 262 0 345 276 172 0 chr17 28612444 28612578 -56825902 + L3 LINE CR1 1419 1575 -2 2604 62 0 0 chr17 28612591 28612897 -56825583 + AluY SINE Alu 1 306 -5 2299 75 7 0 chr17 28612941 28613280 -56825200 + AluY SINE Alu 1 341 0 2322 99 0 0 chr17 28613447 28613739 -56824741 - AluSx SINE Alu -20 292 1 1895 164 0 17 chr17 28613748 28614047 -56824433 - AluJb SINE Alu -18 294 1 653 291 80 8 chr17 28614800 28615037 -56823443 + MIR SINE MIR 9 262 0 1635 160 31 27 chr17 28616556 28616850 -56821630 - AluJo SINE Alu -12 300 6 366 271 84 39 chr17 28616936 28617091 -56821389 - MIR SINE MIR -4 258 97 453 277 123 0 chr17 28617179 28617309 -56821171 - L3 LINE CR1 -3 1574 1429 1995 133 0 10 chr17 28617319 28617612 -56820868 + AluSx SINE Alu 7 296 -16 1663 147 13 36 chr17 28617785 28618091 -56820389 + AluJo SINE Alu 1 299 -13 2307 112 3 0 chr17 28618354 28618659 -56819821 - AluSx SINE Alu -6 306 1 22 0 0 0 chr17 28618662 28618684 -56819796 + AT_rich Low_complexity Low_complexity 1 22 0 1748 168 3 10 chr17 28618740 28619037 -56819443 - AluJo SINE Alu -13 299 5 270 243 38 38 chr17 28619355 28619482 -56818998 + MIR SINE MIR 69 188 -61 611 64 0 0 chr17 28619504 28619582 -56818898 - MLT2A2 LTR ERVL -375 78 1 2036 120 0 0 chr17 28619746 28620021 -56818459 - AluSx SINE Alu -13 299 25 1346 186 115 4 chr17 28620359 28620628 -56817852 + AluJo SINE Alu 1 299 -13 267 31 0 0 chr17 28621201 28621233 -56817247 + (CA)n Simple_repeat Simple_repeat 1 32 0 412 224 138 17 chr17 28621395 28621511 -56816969 + L2 LINE L2 3184 3313 0 1817 167 10 3 chr17 28621719 28622019 -56816461 - AluJb SINE Alu -10 302 1 522 31 0 0 chr17 28622046 28622110 -56816370 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 298 310 97 26 chr17 28622246 28622359 -56816121 - L2 LINE L2 -27 3245 3125 846 179 0 8 chr17 28622587 28622753 -56815727 + FLAM_C SINE Alu 1 165 0 303 345 95 0 chr17 28622982 28623130 -56815350 - L2 LINE L2 -229 3043 2882 318 310 83 73 chr17 28623230 28623721 -56814759 + L2 LINE L2 1980 2475 -839 218 323 47 16 chr17 28623951 28624078 -56814402 + L2 LINE L2 2589 2719 -595 32 26 0 0 chr17 28624086 28624125 -56814355 + AT_rich Low_complexity Low_complexity 1 39 0 773 313 84 31 chr17 28624313 28624799 -56813681 + L1ME LINE L1 5265 5776 -345 659 275 189 16 chr17 28625413 28625784 -56812696 + L2 LINE L2 2872 3306 -7 937 144 8 0 chr17 28626185 28626317 -56812163 - FLAM_C SINE Alu 0 133 1 2137 84 38 3 chr17 28626755 28627042 -56811438 - AluSq SINE Alu -16 297 1 1129 148 19 43 chr17 28627124 28627333 -56811147 - AluJb SINE Alu -5 307 104 358 250 13 0 chr17 28627335 28627411 -56811069 - MER58B DNA MER1_type -6 335 259 613 117 32 0 chr17 28627431 28627525 -56810955 + MER58 DNA MER1_type 121 217 -2203 679 159 22 29 chr17 28627565 28627703 -56810777 - MER58 DNA MER1_type -124 217 81 795 299 34 4 chr17 28628444 28628678 -56809802 + MIR SINE MIR 22 262 0 2210 145 5 75 chr17 28628915 28629330 -56809150 + MER57A LTR ERV1 3 388 -15 2331 85 3 3 chr17 28629609 28629904 -56808576 + AluSg SINE Alu 2 296 -14 450 0 0 0 chr17 28630162 28630212 -56808268 + (TA)n Simple_repeat Simple_repeat 2 51 0 1324 125 23 28 chr17 28630938 28631154 -56807326 - AluSq SINE Alu -15 298 84 457 221 83 69 chr17 28631282 28631436 -56807044 - L1ME LINE L1 -311 5810 5651 1842 136 51 17 chr17 28631436 28631731 -56806749 - AluJb SINE Alu -5 307 3 457 221 83 69 chr17 28631731 28631780 -56806700 - L1ME LINE L1 -470 5651 5604 271 287 96 48 chr17 28631909 28632118 -56806362 - L1ME LINE L1 -535 5586 5368 2238 116 0 22 chr17 28632165 28632484 -56805996 - AluSx SINE Alu 0 312 1 327 328 32 24 chr17 28633539 28633664 -56804816 - L2 LINE L2 -49 3223 3098 2137 121 0 3 chr17 28633975 28634272 -56804208 - AluSx SINE Alu -16 296 1 2049 110 14 14 chr17 28634705 28634995 -56803485 - AluSx SINE Alu -22 290 1 364 292 146 31 chr17 28635216 28635580 -56802900 - L2 LINE L2 -155 3117 2712 2677 33 3 0 chr17 28635808 28636113 -56802367 - AluY SINE Alu -5 306 1 410 294 0 34 chr17 28636467 28636586 -56801894 + L2 LINE L2 3199 3313 0 403 340 94 4 chr17 28636641 28636876 -56801604 - MIR SINE MIR -6 256 1 180 0 0 0 chr17 28637452 28637472 -56801008 + (A)n Simple_repeat Simple_repeat 1 20 0 388 231 102 28 chr17 28637826 28637934 -56800546 + MER94 DNA DNA 16 131 -3 276 361 72 26 chr17 28638139 28638333 -56800147 + L2 LINE L2 3070 3272 0 335 333 130 11 chr17 28639170 28639431 -56799049 + L3b LINE CR1 1281 1572 -11 2261 64 43 0 chr17 28639640 28639921 -56798559 - AluY SINE Alu -18 293 1 907 276 202 14 chr17 28641560 28642351 -56796129 + L2 LINE L2 2339 3297 -16 576 280 51 64 chr17 28642645 28642786 -56795694 - HAL1 LINE L1 -714 1793 1652 1852 169 0 16 chr17 28642786 28643094 -56795386 - AluJo SINE Alu -9 303 1 576 280 51 64 chr17 28643094 28643116 -56795364 - HAL1 LINE L1 -855 1652 1631 2453 62 0 3 chr17 28643116 28643421 -56795059 - AluY SINE Alu -7 304 1 576 280 51 64 chr17 28643421 28643552 -56794928 - HAL1 LINE L1 -876 1631 1502 627 269 19 53 chr17 28644075 28644283 -56794197 + MIR SINE MIR 7 207 -55 195 42 0 0 chr17 28645921 28645945 -56792535 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 1508 152 0 86 chr17 28645945 28646235 -56792245 - AluJo SINE Alu -32 280 16 1999 137 0 3 chr17 28646238 28646538 -56791942 + AluSx SINE Alu 1 299 -13 925 136 0 45 chr17 28646547 28646702 -56791778 - AluJo SINE Alu -164 148 1 2565 62 0 3 chr17 28647004 28647309 -56791171 - AluY SINE Alu -7 304 1 200 336 35 35 chr17 28648193 28648309 -56790171 + L2 LINE L2 2794 2909 -405 1944 150 10 19 chr17 28648325 28648639 -56789841 - AluJb SINE Alu -1 311 1 2163 233 65 23 chr17 28648769 28649336 -56789144 - L1ME1 LINE L1 -5 6230 5640 4333 228 48 87 chr17 28649437 28649679 -56788801 - L1ME1 LINE L1 -2071 4144 3894 2386 77 0 3 chr17 28649679 28649977 -56788503 - AluSg SINE Alu -11 299 3 4333 228 48 87 chr17 28649977 28650850 -56787630 - L1ME1 LINE L1 -2321 3894 2988 1620 168 0 40 chr17 28650850 28651012 -56787468 - AluJb SINE Alu -20 292 125 330 26 0 0 chr17 28651012 28651051 -56787429 + (TG)n Simple_repeat Simple_repeat 2 40 0 2010 112 3 37 chr17 28651051 28651346 -56787134 - AluSx SINE Alu -27 285 1 1620 168 0 40 chr17 28651346 28651486 -56786994 - AluJb SINE Alu -185 127 1 4333 228 48 87 chr17 28651486 28652998 -56785482 - L1ME1 LINE L1 -3227 2988 1014 991 197 5 0 chr17 28652998 28653191 -56785289 - AluJb SINE Alu 0 312 119 655 111 0 0 chr17 28653284 28653374 -56785106 - AluJ/FLAM SINE Alu -222 90 1 486 105 38 105 chr17 28653691 28653772 -56784708 - L1MB2 LINE L1 -36 6135 6061 1496 134 92 42 chr17 28653772 28654055 -56784425 - AluJo SINE Alu -15 297 1 486 105 38 105 chr17 28654055 28654078 -56784402 - L1MB2 LINE L1 -110 6061 6038 301 344 22 0 chr17 28654127 28654217 -56784263 - MIR SINE MIR -81 127 36 2294 93 0 26 chr17 28654718 28655030 -56783450 + AluSx SINE Alu 1 304 -8 652 221 132 10 chr17 28655644 28655848 -56782632 - L3 LINE CR1 -696 881 653 378 350 113 39 chr17 28655851 28656160 -56782320 - L3 LINE CR1 -1200 377 46 363 197 0 13 chr17 28656384 28656460 -56782020 - MLT1K LTR MaLR -3 585 511 2423 93 0 0 chr17 28656500 28656801 -56781679 + AluSq SINE Alu 1 301 -12 1888 149 30 3 chr17 28657939 28658240 -56780240 + AluSx SINE Alu 1 309 -3 230 220 0 0 chr17 28658303 28658353 -56780127 - L1MB2 LINE L1 -30 6141 6092 186 363 93 63 chr17 28659444 28659874 -56778606 + L2 LINE L2 2824 3266 -6 387 272 136 18 chr17 28661039 28661208 -56777272 - MER5A DNA MER1_type 0 189 1 346 267 8 25 chr17 28661222 28661342 -56777138 - L1MB2 LINE L1 -1985 5823 5706 1091 172 34 14 chr17 28661487 28661727 -56776753 - L1MC3 LINE L1 -111 6055 5811 688 204 164 62 chr17 28661838 28662113 -56776367 + L1MC3 LINE L1 6040 6342 -1443 391 283 21 28 chr17 28662682 28662827 -56775653 - HAL1b LINE L1 -821 527 384 2123 121 0 3 chr17 28662926 28663224 -56775256 + AluSg SINE Alu 1 297 -13 408 207 11 0 chr17 28663486 28663573 -56774907 - HsTC2 DNA Tc2 0 1898 1811 1729 113 18 101 chr17 28664407 28664744 -56773736 + L1MA5 LINE L1 5990 6298 -2 782 288 56 10 chr17 28664935 28665223 -56773257 - L2 LINE L2 -8 3305 3005 232 264 66 33 chr17 28666694 28666815 -56771665 + L1MC4a LINE L1 5862 5986 -1822 2205 94 14 3 chr17 28666880 28667167 -56771313 + AluSx SINE Alu 21 310 -2 234 309 82 27 chr17 28667178 28667288 -56771192 - L1MC4a LINE L1 -1877 5931 5816 406 194 9 37 chr17 28667299 28667362 -56771118 - MER103 DNA DNA -57 109 49 2053 156 0 0 chr17 28667362 28667664 -56770816 + AluSx SINE Alu 1 302 -10 406 194 9 37 chr17 28667664 28667708 -56770772 - MER103 DNA DNA -117 49 5 1113 132 16 11 chr17 28667858 28668048 -56770432 - Tigger1 DNA MER2_type 0 2418 2228 13520 112 9 58 chr17 28668172 28668917 -56769563 - Tigger1 DNA MER2_type -200 2218 1438 2395 105 0 0 chr17 28668917 28669223 -56769257 - AluSx SINE Alu -6 306 1 13520 112 9 58 chr17 28669223 28670211 -56768269 - Tigger1 DNA MER2_type -980 1438 624 1548 173 88 34 chr17 28670211 28670506 -56767974 - AluJo SINE Alu -1 311 1 13520 112 9 58 chr17 28670506 28671102 -56767378 - Tigger1 DNA MER2_type -1794 624 1 2189 210 55 9 chr17 28671366 28671947 -56766533 - L1MEc LINE L1 -5336 1060 453 21 36 0 0 chr17 28672395 28672423 -56766057 + AT_rich Low_complexity Low_complexity 1 28 0 2499 66 0 0 chr17 28672792 28673095 -56765385 - AluY SINE Alu -8 303 1 791 186 0 0 chr17 28674584 28674713 -56763767 + FLAM_A SINE Alu 1 129 -4 6947 218 44 33 chr17 28674792 28675069 -56763411 + L1ME1 LINE L1 3119 3391 -2775 1857 113 3 75 chr17 28675069 28675389 -56763091 + AluSx SINE Alu 1 297 -15 6947 218 44 33 chr17 28675389 28676148 -56762332 + L1ME1 LINE L1 3391 4140 -2026 2410 86 0 7 chr17 28676148 28676451 -56762029 + AluSx SINE Alu 1 301 -11 6947 218 44 33 chr17 28676451 28678387 -56760093 + L1ME1 LINE L1 4140 6116 -50 26 74 0 0 chr17 28679171 28679225 -56759255 + AT_rich Low_complexity Low_complexity 1 54 0 426 294 77 42 chr17 28679776 28679919 -56758561 + MIR SINE MIR 42 189 -73 2021 144 3 0 chr17 28680827 28681125 -56757355 + AluSq SINE Alu 1 299 -14 2243 116 0 0 chr17 28682290 28682583 -56755897 - AluSx SINE Alu -14 298 6 200 233 23 0 chr17 28683152 28683195 -56755285 + MER5B DNA MER1_type 1 44 -134 * 314 181 28 14 chr17 28683193 28683265 -56755215 - MER5B DNA MER1_type -80 98 26 21 36 0 0 chr17 28683368 28683396 -56755084 + AT_rich Low_complexity Low_complexity 1 28 0 2004 239 61 40 chr17 28683555 28684362 -56754118 - L1MDa LINE L1 -5452 1088 34 1632 139 76 38 chr17 28684564 28684908 -56753572 - MER46B DNA MER2_type -4 232 1 1596 150 81 39 chr17 28685349 28685708 -56752772 + MLT1A2 LTR MaLR 1 374 0 611 295 156 24 chr17 28685995 28686334 -56752146 - L2 LINE L2 -10 3303 2920 214 267 19 105 chr17 28686423 28686528 -56751952 - MIR SINE MIR -20 242 147 1284 171 143 6 chr17 28687328 28687649 -56750831 - MLT1A1 LTR MaLR 0 365 1 280 188 0 0 chr17 28687804 28687852 -56750628 - MER5B DNA MER1_type -1 177 130 910 135 0 0 chr17 28687872 28688005 -56750475 - FLAM_C SINE Alu 0 133 1 708 213 14 0 chr17 28688007 28688148 -56750332 - MER5B DNA MER1_type -35 143 1 2415 98 0 9 chr17 28688429 28688744 -56749736 - AluSq SINE Alu -1 312 1 1742 153 69 0 chr17 28689210 28689484 -56748996 - AluJb SINE Alu -19 293 1 265 301 14 0 chr17 28689611 28689684 -56748796 + MIR SINE MIR 61 134 -74 281 317 89 8 chr17 28689768 28689891 -56748589 + L2 LINE L2 3138 3270 -2 6117 177 35 5 chr17 28692343 28693106 -56745374 + L1MC3 LINE L1 5441 6258 -1527 2242 98 14 10 chr17 28693106 28693402 -56745078 + AluSg1 SINE Alu 1 297 -12 6117 177 35 5 chr17 28693402 28693891 -56744589 + L1MC3 LINE L1 6258 6731 -1054 821 114 0 0 chr17 28693894 28693999 -56744481 - FLAM_C SINE Alu -20 123 19 368 147 62 78 chr17 28694009 28694104 -56744376 + L1MB8 LINE L1 6051 6145 -33 2268 136 23 43 chr17 28694104 28694233 -56744247 - MLT1B LTR MaLR 0 390 260 2209 106 0 3 chr17 28694233 28694526 -56743954 - AluY SINE Alu -19 292 1 2268 136 23 43 chr17 28694526 28694794 -56743686 - MLT1B LTR MaLR -130 260 1 368 147 62 78 chr17 28694794 28694827 -56743653 + L1MB8 LINE L1 6145 6177 -1 1645 155 13 43 chr17 28695010 28695313 -56743167 + AluJo SINE Alu 1 294 -18 427 257 228 4 chr17 28695321 28695593 -56742887 + L1MC4 LINE L1 7708 8040 -2 442 269 106 29 chr17 28695910 28696118 -56742362 + Charlie8 DNA MER1_type 6 229 -2188 315 0 0 0 chr17 28696221 28696256 -56742224 + (CA)n Simple_repeat Simple_repeat 2 36 0 242 281 109 0 chr17 28696443 28696571 -56741909 + L1M4 LINE L1 4753 4894 -1252 634 304 101 19 chr17 28696591 28697009 -56741471 + L1M4 LINE L1 2825 3276 -2870 526 209 7 65 chr17 28697188 28697341 -56741139 - L1ME3 LINE L1 -2 6160 6017 884 268 92 43 chr17 28697347 28697717 -56740763 + L2 LINE L2 2919 3306 -7 1989 102 33 11 chr17 28699045 28699319 -56739161 + AluSg SINE Alu 1 280 -30 203 239 76 33 chr17 28699561 28699653 -56738827 - MIR3 SINE MIR -3 205 110 207 318 81 28 chr17 28699729 28699940 -56738540 + L2 LINE L2 2172 2393 -921 311 267 105 0 chr17 28699991 28700096 -56738384 - L1MC4 LINE L1 0 8042 7927 422 294 131 19 chr17 28700184 28700575 -56737905 - LTR16C LTR ERVL -13 478 2 1913 150 13 7 chr17 28701015 28701321 -56737159 + AluSx SINE Alu 1 308 -4 601 181 4 6 chr17 28702702 28702862 -56735618 + L1M4 LINE L1 5178 5339 -829 423 0 0 0 chr17 28702990 28703037 -56735443 + (TG)n Simple_repeat Simple_repeat 2 48 0 714 203 43 7 chr17 28703185 28703323 -56735157 - FRAM SINE Alu -35 141 1 3800 12 0 0 chr17 28703951 28704383 -56734097 - L1PA3 LINE L1 0 6155 5724 36 40 0 0 chr17 28704515 28704565 -56733915 + AT_rich Low_complexity Low_complexity 1 50 0 33497 43 8 0 chr17 28704567 28709758 -56728722 - L1PA5 LINE L1 -5 6149 922 234 247 129 0 chr17 28709758 28709843 -56728637 - MER103 DNA DNA -69 97 2 547 133 219 0 chr17 28709973 28710078 -56728402 + FRAM SINE Alu 25 152 -24 2225 120 7 0 chr17 28711558 28711866 -56726614 + AluSx SINE Alu 1 310 -2 365 204 11 43 chr17 28711926 28712019 -56726461 + MER21B LTR ERV1 1 90 -773 1471 183 16 0 chr17 28712074 28712326 -56726154 + MER21B LTR ERV1 83 338 -525 6196 226 67 35 chr17 28712357 28712809 -56725671 - L1MEc LINE L1 -4096 2300 1864 2135 180 36 21 chr17 28712809 28713186 -56725294 - L1MB3 LINE L1 -13 6170 5783 2394 109 0 0 chr17 28713186 28713498 -56724982 - AluSx SINE Alu 0 312 1 2135 180 36 21 chr17 28713498 28713598 -56724882 - L1MB3 LINE L1 -400 5783 5686 6196 226 67 35 chr17 28713598 28715270 -56723210 - L1MEc LINE L1 -4532 1864 107 2262 110 0 7 chr17 28715301 28715602 -56722878 - AluSc SINE Alu -10 299 1 375 280 127 38 chr17 28715658 28715972 -56722508 - L1MB3 LINE L1 -2051 5757 5416 36 23 0 0 chr17 28716131 28716174 -56722306 + AT_rich Low_complexity Low_complexity 1 43 0 2624 49 0 3 chr17 28716486 28716793 -56721687 + AluY SINE Alu 1 306 -5 2153 135 3 0 chr17 28716951 28717255 -56721225 + AluSq SINE Alu 1 305 -8 2147 107 24 0 chr17 28718311 28718602 -56719878 - AluSx SINE Alu -12 300 3 1484 242 130 29 chr17 28718849 28719650 -56718830 - L2 LINE L2 0 3313 2427 1087 198 64 0 chr17 28720949 28721151 -56717329 + MER58C DNA MER1_type 1 215 0 218 261 0 0 chr17 28721180 28721226 -56717254 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 486 273 8 53 chr17 28721264 28721396 -56717084 + L2 LINE L2 3147 3272 0 612 222 39 50 chr17 28722206 28722386 -56716094 + MER5B DNA MER1_type 1 178 0 321 231 81 141 chr17 28724840 28724997 -56713483 - HAL1 LINE L1 -29 2478 2313 1918 165 0 10 chr17 28724997 28725294 -56713186 + AluJb SINE Alu 1 294 -18 321 231 81 141 chr17 28725294 28725668 -56712812 - HAL1 LINE L1 -194 2313 1979 1077 202 48 40 chr17 28725941 28726017 -56712463 + MIR SINE MIR 8 82 -180 2170 98 7 7 chr17 28726017 28726313 -56712167 + AluSg SINE Alu 1 296 -14 1077 202 48 40 chr17 28726313 28726488 -56711992 + MIR SINE MIR 82 261 -1 2506 82 0 0 chr17 28726536 28726842 -56711638 - AluY SINE Alu -4 307 2 1342 240 41 36 chr17 28728423 28729077 -56709403 + L2 LINE L2 2670 3313 0 1433 299 126 42 chr17 28729081 28730061 -56708419 - HAL1 LINE L1 -1379 1128 67 189 0 0 0 chr17 28730328 28730349 -56708131 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 435 210 12 0 chr17 28732241 28732322 -56706158 - MER103 DNA DNA -13 153 72 2513 72 0 3 chr17 28732322 28732628 -56705852 - AluY SINE Alu -6 305 1 956 236 60 99 chr17 28732721 28733285 -56705195 + MER34 LTR ERV1 1 542 0 1794 170 3 13 chr17 28733511 28733822 -56704658 - AluSx SINE Alu -4 308 1 871 194 17 0 chr17 28733853 28734028 -56704452 + L1MC4 LINE L1 7743 7920 -122 2816 209 49 26 chr17 28734096 28735032 -56703448 + LTR28 LTR ERV1 3 1020 0 661 120 34 17 chr17 28735034 28735151 -56703329 + L1MC4 LINE L1 7923 8041 -1 1088 149 20 20 chr17 28735439 28735634 -56702846 - MER96B DNA MER1_type? -184 233 39 338 356 122 5 chr17 28735713 28735901 -56702579 - MIR SINE MIR -19 243 34 2052 130 0 0 chr17 28736105 28736390 -56702090 - AluSx SINE Alu -5 307 23 870 254 25 8 chr17 28736724 28736960 -56701520 - AluSg/x SINE Alu 0 309 70 339 277 140 55 chr17 28737085 28737320 -56701160 + L1M4 LINE L1 3601 3855 -2291 2202 102 0 49 chr17 28737320 28737644 -56700836 + AluSg SINE Alu 1 308 -2 198 0 0 0 chr17 28737898 28737920 -56700560 + (T)n Simple_repeat Simple_repeat 1 22 0 1507 231 65 5 chr17 28738591 28738963 -56699517 + MLT1G LTR MaLR 197 590 0 251 272 80 8 chr17 28738967 28739092 -56699388 + MLT1G-int LTR MaLR 4 137 -1234 489 341 31 5 chr17 28739099 28739322 -56699158 + MLT1G-int LTR MaLR 292 520 -851 1573 162 20 44 chr17 28740149 28740445 -56698035 - AluJo SINE Alu -23 289 1 1885 235 32 44 chr17 28740509 28740744 -56697736 + MLT1G LTR MaLR 11 247 -343 1745 126 84 11 chr17 28740744 28741030 -56697450 + AluSx SINE Alu 1 307 -5 1885 235 32 44 chr17 28741030 28741267 -56697213 + MLT1G LTR MaLR 247 479 -111 1999 113 0 36 chr17 28741267 28741569 -56696911 - AluSq SINE Alu -22 291 1 1885 235 32 44 chr17 28741569 28741593 -56696887 + MLT1G LTR MaLR 479 502 -88 25 0 0 0 chr17 28741829 28741854 -56696626 + AT_rich Low_complexity Low_complexity 1 25 0 2142 121 23 3 chr17 28741928 28742234 -56696246 - AluSx SINE Alu 0 312 1 547 220 40 0 chr17 28742445 28742545 -56695935 + FLAM_A SINE Alu 1 104 -38 234 306 105 16 chr17 28743032 28743156 -56695324 + MIR3 SINE MIR 64 198 -10 193 250 0 0 chr17 28743310 28743350 -56695130 - MIR SINE MIR -30 232 193 25 0 0 0 chr17 28744424 28744449 -56694031 + AT_rich Low_complexity Low_complexity 1 25 0 255 216 103 21 chr17 28744459 28744556 -56693924 - L1M LINE L1 -2442 5366 5262 339 256 154 26 chr17 28744703 28744937 -56693543 - L1ME4a LINE L1 -188 5933 5670 2512 64 0 0 chr17 28745645 28745940 -56692540 - AluY SINE Alu -16 295 1 252 111 0 19 chr17 28746409 28746463 -56692017 - LTR66 LTR ERVL -169 441 389 378 335 26 7 chr17 28746926 28747078 -56691402 + L2 LINE L2 2916 3070 -243 43463 33 24 1 chr17 28747088 28753103 -56685377 - L1PA2 LINE L1 0 6155 1 324 303 185 11 chr17 28753147 28753325 -56685155 + L2 LINE L2 3103 3311 -2 232 210 70 110 chr17 28754756 28754856 -56683624 + MLT1G LTR MaLR 488 583 -12 1086 210 61 34 chr17 28754987 28755360 -56683120 + MLT1D LTR MaLR 80 505 0 1811 150 4 7 chr17 28755426 28755700 -56682780 + AluJb SINE Alu 13 285 -27 623 147 52 35 chr17 28755700 28755795 -56682685 + AluJb SINE Alu 187 286 -26 378 0 0 0 chr17 28755795 28755837 -56682643 + (CA)n Simple_repeat Simple_repeat 2 43 0 623 147 52 35 chr17 28755837 28755857 -56682623 + AluJb SINE Alu 286 304 -8 276 190 76 13 chr17 28755881 28755960 -56682520 - MIR SINE MIR -44 218 135 1181 134 0 70 chr17 28755972 28756026 -56682454 - AluJo SINE Alu -125 187 131 2522 63 0 3 chr17 28756026 28756327 -56682153 - AluY SINE Alu -11 300 1 1181 134 0 70 chr17 28756327 28756473 -56682007 - AluJo SINE Alu -181 131 1 402 100 0 0 chr17 28757751 28757811 -56680669 + (TG)n Simple_repeat Simple_repeat 2 61 0 536 184 125 0 chr17 28757818 28757954 -56680526 + L1ME4a LINE L1 5963 6115 -6 387 228 82 44 chr17 28758444 28758546 -56679934 - L1ME4a LINE L1 -206 5915 5803 2198 116 0 23 chr17 28758546 28758856 -56679624 - AluSx SINE Alu -9 303 1 387 228 82 44 chr17 28758856 28758911 -56679569 - L1ME4a LINE L1 -318 5803 5752 * 1105 188 16 78 chr17 28758899 28759010 -56679470 - L1MA4A LINE L1 -7 6296 6180 1981 122 30 3 chr17 28759010 28759305 -56679175 - AluSx SINE Alu -9 303 1 1105 188 16 78 chr17 28759305 28759335 -56679145 - L1MA4A LINE L1 -123 6180 6150 2469 122 106 5 chr17 28759335 28759721 -56678759 + MSTB LTR MaLR 1 425 -1 1105 188 16 78 chr17 28759721 28759825 -56678655 - L1MA4A LINE L1 -153 6150 6070 1520 187 18 11 chr17 28759825 28760109 -56678371 + AluJo SINE Alu 16 301 -11 1105 188 16 78 chr17 28760109 28760169 -56678311 - L1MA4A LINE L1 -233 6070 6008 2382 92 3 0 chr17 28760232 28760536 -56677944 - AluSx SINE Alu -7 305 1 465 253 132 37 chr17 28760556 28760746 -56677734 - L1ME4a LINE L1 -436 5685 5478 218 415 0 0 chr17 28763155 28763261 -56675219 + L2 LINE L2 1896 2001 -1313 2826 10 0 0 chr17 28763264 28763565 -56674915 + AluYb8 SINE Alu 15 315 -3 648 278 101 66 chr17 28763588 28763915 -56674565 + L2 LINE L2 2276 2625 -689 2311 149 3 20 chr17 28763915 28764258 -56674222 - MER1B DNA MER1_type 0 337 1 648 278 101 66 chr17 28764258 28764387 -56674093 + L2 LINE L2 2625 2748 -566 387 223 192 23 chr17 28764388 28764518 -56673962 + L1ME LINE L1 2 153 -5966 683 294 10 5 chr17 28764521 28764715 -56673765 + L1ME2 LINE L1 5462 5656 -506 1214 212 16 20 chr17 28764716 28764961 -56673519 + Charlie1 DNA MER1_type 2 245 -2516 397 297 136 45 chr17 28764996 28765242 -56673238 + L1ME2 LINE L1 5646 5915 -249 216 239 85 136 chr17 28765859 28766035 -56672445 + L2 LINE L2 3029 3195 -77 643 319 25 34 chr17 28766802 28767037 -56671443 + MIR SINE MIR 9 241 -21 657 163 14 7 chr17 28767086 28767227 -56671253 + CT-rich Low_complexity Low_complexity 3 144 0 2066 111 13 19 chr17 28767788 28768095 -56670385 - AluSg SINE Alu -5 305 1 404 229 68 82 chr17 28768394 28768673 -56669807 + L1MC5 LINE L1 7653 7927 -34 995 316 92 50 chr17 28768677 28768970 -56669510 + L1ME LINE L1 2659 2939 -3190 2034 119 52 24 chr17 28768970 28769298 -56669182 - MER1B DNA MER1_type 0 337 1 995 316 92 50 chr17 28769298 28769492 -56668988 + L1ME LINE L1 2939 3124 -3005 2479 107 0 0 chr17 28769492 28769802 -56668678 + AluSx SINE Alu 1 310 -2 995 316 92 50 chr17 28769802 28770264 -56668216 + L1ME LINE L1 3124 3648 -2481 1783 177 0 13 chr17 28770392 28770697 -56667783 - AluJo SINE Alu -11 301 1 740 180 0 8 chr17 28772284 28772412 -56666068 - FLAM_A SINE Alu -6 127 1 498 281 73 16 chr17 28773235 28773427 -56665053 + L1ME LINE L1 5460 5662 -442 189 340 0 0 chr17 28773462 28773515 -56664965 - MIR SINE MIR 0 262 210 41 21 0 0 chr17 28773725 28773773 -56664707 + AT_rich Low_complexity Low_complexity 1 48 0 702 203 30 0 chr17 28773925 28774058 -56664422 - MER8 DNA MER2_type -2 237 101 2325 80 0 17 chr17 28774095 28774394 -56664086 - AluY SINE Alu -17 294 1 2387 90 33 36 chr17 28774537 28774902 -56663578 + THE1B LTR MaLR 1 364 0 2041 142 3 3 chr17 28774950 28775239 -56663241 - AluSx SINE Alu -23 289 1 371 362 77 10 chr17 28775296 28775503 -56662977 + L1ME LINE L1 4729 4949 -1197 2369 85 0 0 chr17 28775534 28775827 -56662653 - AluY SINE Alu -18 293 1 287 316 95 11 chr17 28775992 28776255 -56662225 + L1ME LINE L1 5266 5550 -612 2805 177 25 35 chr17 28776400 28776964 -56661516 + MER68 LTR ERV1 5 562 0 502 227 24 28 chr17 28777063 28777266 -56661214 + HAL1b LINE L1 1189 1340 -8 613 189 47 0 chr17 28778000 28778127 -56660353 + MER94 DNA DNA 1 133 -1 567 292 98 30 chr17 28778522 28779899 -56658581 + L1ME LINE L1 4178 5654 -508 2267 86 0 0 chr17 28780196 28780476 -56658004 + AluSg SINE Alu 1 280 -30 412 278 85 81 chr17 28780484 28780743 -56657737 + HAL1b LINE L1 346 605 -743 21 0 0 0 chr17 28780795 28780816 -56657664 + AT_rich Low_complexity Low_complexity 1 21 0 531 339 46 14 chr17 28781168 28781599 -56656881 + L1M4 LINE L1 3908 4352 -1794 764 224 90 59 chr17 28781602 28781868 -56656612 - MLT1E LTR MaLR -317 276 3 712 276 95 15 chr17 28781980 28782390 -56656090 - L1M4 LINE L1 -1094 5052 4610 1779 139 44 4 chr17 28782480 28782753 -56655727 - AluSx SINE Alu -26 286 3 3485 82 6 22 chr17 28782880 28783382 -56655098 - L1PA11 LINE L1 -1 6173 5680 3087 88 19 9 chr17 28783385 28784172 -56654308 + L1PA11 LINE L1 4873 5670 -498 688 338 147 17 chr17 28784241 28784889 -56653591 + L2 LINE L2 1974 2705 -609 186 194 0 0 chr17 28785179 28785215 -56653265 - L2 LINE L2 -977 2337 2302 24 0 0 0 chr17 28785429 28785453 -56653027 + AT_rich Low_complexity Low_complexity 1 24 0 2595 100 45 3 chr17 28785651 28786031 -56652449 + MER48 LTR ERV1 1 396 -2 1750 178 7 7 chr17 28786445 28786737 -56651743 - AluJb SINE Alu -20 292 1 2180 121 3 3 chr17 28786994 28787292 -56651188 - AluSc SINE Alu -11 298 1 1586 162 97 0 chr17 28787442 28787751 -56650729 + MER44D DNA MER2_type 1 609 0 4212 145 34 35 chr17 28789462 28790706 -56647774 + L1MA7 LINE L1 4896 6131 -160 1171 162 6 0 chr17 28790719 28790898 -56647582 - FRAM SINE Alu 0 176 1 917 112 50 0 chr17 28790898 28791059 -56647421 + L1MA6 LINE L1 6132 6300 0 23 0 0 0 chr17 28791175 28791198 -56647282 + AT_rich Low_complexity Low_complexity 1 23 0 1403 242 157 2 chr17 28791544 28792002 -56646478 + L1MC4 LINE L1 6463 6991 -1051 261 232 112 24 chr17 28792619 28792744 -56645736 - L1MC4 LINE L1 0 8042 7907 333 259 71 82 chr17 28793043 28793169 -56645311 - MER102b DNA MER1_type -1133 295 170 2480 67 0 0 chr17 28793169 28793469 -56645011 - AluY SINE Alu -11 300 1 333 259 71 82 chr17 28793469 28793512 -56644968 - MER102b DNA MER1_type -1258 170 128 1686 183 50 0 chr17 28794049 28794372 -56644108 + MER2 DNA MER2_type 1 339 -6 23 68 0 0 chr17 28794437 28794481 -56643999 + AT_rich Low_complexity Low_complexity 1 44 0 344 169 133 12 chr17 28794746 28794829 -56643651 + MER5C DNA MER1_type 32 124 -200 1516 199 20 10 chr17 28795039 28795335 -56643145 + MLT1A1 LTR MaLR 67 365 0 2235 110 3 3 chr17 28796001 28796310 -56642170 + AluY SINE Alu 1 309 -2 24 32 0 0 chr17 28796362 28796393 -56642087 + AT_rich Low_complexity Low_complexity 1 31 0 1167 198 0 55 chr17 28796463 28796701 -56641779 - AluJb SINE Alu -87 225 1 373 232 73 3 chr17 28797733 28797895 -56640585 + MLT1I LTR MaLR 270 401 -8 312 236 63 110 chr17 28797948 28798139 -56640341 - L1MC/D LINE L1 -2018 5790 5609 1627 148 31 16 chr17 28798152 28798409 -56640071 + AluJo SINE Alu 38 298 -14 1524 197 16 48 chr17 28798568 28798943 -56639537 + MLT1A1 LTR MaLR 3 365 0 279 310 0 0 chr17 28798985 28799056 -56639424 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 22 70 0 0 chr17 28799134 28799177 -56639303 + AT_rich Low_complexity Low_complexity 1 43 0 1518 175 0 29 chr17 28799177 28799451 -56639029 - AluJo SINE Alu -46 266 1 2077 159 0 0 chr17 28799456 28799764 -56638716 - AluSx SINE Alu -4 308 1 2267 85 3 0 chr17 28800505 28800787 -56637693 - AluSx SINE Alu -14 298 16 513 294 162 19 chr17 28801186 28801451 -56637029 + L2 LINE L2 2238 2540 -774 265 296 11 80 chr17 28801658 28801834 -56636646 + MLT1L LTR MaLR 37 200 -415 674 214 81 38 chr17 28801922 28802132 -56636348 + MLT1L LTR MaLR 387 605 -10 723 278 66 12 chr17 28802337 28802578 -56635902 - MIR SINE MIR -3 259 6 323 258 11 43 chr17 28802868 28802961 -56635519 - MIR SINE MIR -6 256 167 356 221 0 63 chr17 28803037 28803132 -56635348 + L2 LINE L2 2483 2571 -743 547 326 58 87 chr17 28803252 28803700 -56634780 - L2 LINE L2 0 3272 2838 276 318 126 56 chr17 28803796 28804010 -56634470 - L2 LINE L2 -660 2654 2426 2273 105 0 3 chr17 28804118 28804423 -56634057 + AluSc SINE Alu 2 305 -4 875 267 116 26 chr17 28804785 28805174 -56633306 - MLT1J1 LTR MaLR -14 432 9 285 184 41 71 chr17 28805733 28805831 -56632649 - MLT1J2 LTR MaLR -287 163 69 378 295 73 123 chr17 28806138 28806480 -56632000 - L2 LINE L2 0 3272 2948 25 37 0 0 chr17 28806941 28806968 -56631512 + AT_rich Low_complexity Low_complexity 1 27 0 850 154 0 15 chr17 28807157 28807293 -56631187 - AluJo SINE Alu -178 134 1 833 220 57 68 chr17 28807747 28807910 -56630570 - MIR SINE MIR 0 262 102 2747 3 0 3 chr17 28807910 28808212 -56630268 + AluYa5 SINE Alu 1 301 -10 833 220 57 68 chr17 28808212 28808312 -56630168 - MIR SINE MIR -160 102 2 554 261 89 6 chr17 28808695 28808852 -56629628 + MIR SINE MIR 23 192 -70 527 247 33 33 chr17 28810073 28810240 -56628240 + MIR SINE MIR 41 212 -50 1187 255 79 72 chr17 28810362 28810958 -56627522 + MLT1L LTR MaLR 11 610 -5 30 0 0 0 chr17 28811015 28811045 -56627435 + AT_rich Low_complexity Low_complexity 1 30 0 301 194 0 15 chr17 28813459 28813526 -56624954 + MARNA DNA Mariner 40 105 -481 222 37 0 0 chr17 28814103 28814130 -56624350 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 522 109 209 18 chr17 28814381 28814491 -56623989 + LTR7 LTR ERV1 1 131 -319 2795 143 14 8 chr17 28814491 28814981 -56623499 + HERVH LTR ERV1 3 495 -7218 3878 123 20 31 chr17 28814999 28815709 -56622771 + HERVH LTR ERV1 791 1492 -6221 1652 162 3 26 chr17 28816494 28816796 -56621684 + AluJo SINE Alu 1 295 -17 21 36 0 0 chr17 28817266 28817294 -56621186 + AT_rich Low_complexity Low_complexity 1 28 0 458 279 61 12 chr17 28817590 28817837 -56620643 + L1MC4a LINE L1 5666 5924 -1884 267 294 0 35 chr17 28818991 28819076 -56619404 - L2 LINE L2 0 3313 3232 2223 65 41 3 chr17 28819149 28819439 -56619041 + AluY SINE Alu 1 301 -10 351 285 34 72 chr17 28820620 28821085 -56617395 + L1MC4a LINE L1 5573 6016 -105 221 326 0 35 chr17 28821250 28821336 -56617144 + MIR SINE MIR 97 179 -83 266 228 149 26 chr17 28822673 28822787 -56615693 + HAL1 LINE L1 10 137 -2370 291 266 145 29 chr17 28822802 28823009 -56615471 - L1ME LINE L1 -294 5827 5597 22 35 0 0 chr17 28823307 28823336 -56615144 + AT_rich Low_complexity Low_complexity 1 29 0 472 302 0 7 chr17 28823835 28823974 -56614506 + MIR SINE MIR 17 154 -108 1944 144 3 13 chr17 28824160 28824458 -56614022 + AluSx SINE Alu 1 295 -17 26 30 0 0 chr17 28824847 28824880 -56613600 + AT_rich Low_complexity Low_complexity 1 33 0 670 234 0 0 chr17 28824919 28825043 -56613437 + FLAM_A SINE Alu 1 124 -9 199 282 39 51 chr17 28825442 28825520 -56612960 - L2 LINE L2 -17 3296 3220 770 280 100 14 chr17 28826912 28827262 -56611218 + L2 LINE L2 1775 2154 -1160 2043 115 7 7 chr17 28827965 28828260 -56610220 + AluSx SINE Alu 1 295 -17 4004 103 51 36 chr17 28828721 28828853 -56609627 - L1PB2 LINE L1 0 6151 6022 2309 85 3 3 chr17 28828853 28829146 -56609334 - AluSc SINE Alu -16 293 1 4004 103 51 36 chr17 28829146 28829680 -56608800 - L1PB2 LINE L1 -129 6022 5475 4692 186 41 23 chr17 28829680 28830849 -56607631 - L1PB2 LINE L1 -952 5194 4005 1140 269 68 25 chr17 28830970 28831409 -56607071 + MLT1C LTR MaLR 1 458 -9 195 231 328 15 chr17 28831875 28832009 -56606471 + L2 LINE L2 3077 3252 -61 905 180 205 11 chr17 28832242 28832525 -56605955 + L1MC4 LINE L1 6683 7020 -1022 2458 91 0 3 chr17 28832525 28832832 -56605648 + AluSx SINE Alu 1 306 -6 938 241 38 35 chr17 28832832 28833172 -56605308 + L1MC4 LINE L1 7697 8037 -5 650 294 65 14 chr17 28833483 28833776 -56604704 - L1ME LINE L1 -302 5819 5512 1482 188 4 11 chr17 28834082 28834354 -56604126 - AluJo SINE Alu -1 311 42 219 128 170 0 chr17 28834381 28834428 -56604052 + MIR SINE MIR 33 87 -175 198 273 18 18 chr17 28834636 28834691 -56603789 + L2 LINE L2 2243 2297 -1017 313 341 166 18 chr17 28834718 28834947 -56603533 + L2 LINE L2 2386 2648 -666 661 280 126 54 chr17 28835021 28835450 -56603030 + L2 LINE L2 2853 3312 -1 480 329 67 18 chr17 28836421 28837048 -56601432 - L1MEd LINE L1 -756 1734 988 879 199 60 45 chr17 28837072 28837338 -56601142 - L1ME2 LINE L1 -1 6163 5894 1974 124 3 17 chr17 28837359 28837658 -56600822 + AluSx SINE Alu 1 295 -17 1608 271 94 80 chr17 28837664 28838297 -56600183 + L2 LINE L2 2007 2669 -644 2412 60 0 10 chr17 28838297 28838597 -56599883 - AluY SINE Alu -14 297 1 1608 271 94 80 chr17 28838597 28839005 -56599475 + L2 LINE L2 2669 3070 -243 25 31 0 0 chr17 28839027 28839059 -56599421 + AT_rich Low_complexity Low_complexity 1 32 0 1011 232 30 21 chr17 28839242 28839479 -56599001 - MIR SINE MIR -11 251 13 647 294 113 0 chr17 28839515 28839746 -56598734 - MIR SINE MIR 0 262 6 241 228 0 18 chr17 28839861 28839918 -56598562 - L2 LINE L2 -1 3312 3257 188 292 21 0 chr17 28840577 28840625 -56597855 + MIR SINE MIR 214 262 0 1707 228 31 35 chr17 28841201 28841680 -56596800 - MLT1D LTR MaLR 0 505 29 956 259 52 65 chr17 28841729 28842111 -56596369 + MER21B LTR ERV1 26 402 -461 635 268 31 55 chr17 28842116 28842370 -56596110 + MER21B LTR ERV1 507 754 -109 567 252 101 59 chr17 28842443 28842851 -56595629 + MLT1H LTR MaLR 12 548 -1 482 280 104 43 chr17 28843887 28844203 -56594277 + L1MEc LINE L1 790 1085 -5311 2351 94 0 25 chr17 28844203 28844523 -56593957 + AluSx SINE Alu 1 312 0 482 280 104 43 chr17 28844523 28845089 -56593391 + L1MEc LINE L1 1085 1755 -4641 2158 139 0 7 chr17 28845112 28845421 -56593059 + AluSx SINE Alu 6 312 0 377 171 65 12 chr17 28845545 28845715 -56592765 + (TA)n Simple_repeat Simple_repeat 2 180 0 305 336 77 18 chr17 28845827 28846047 -56592433 + L1MEc LINE L1 1909 2141 -4255 1308 262 83 15 chr17 28846686 28847187 -56591293 + L1MEc LINE L1 2215 2785 -3430 2178 102 7 7 chr17 28847187 28847482 -56590998 - AluSg SINE Alu -15 295 1 1308 262 83 15 chr17 28847482 28847727 -56590753 + L1MEc LINE L1 2785 3012 -3203 520 329 92 45 chr17 28848897 28849365 -56589115 - L1MEd LINE L1 -4024 2286 1797 255 314 48 28 chr17 28849370 28849618 -56588862 - L1MEd LINE L1 -4572 1738 1486 1078 276 97 27 chr17 28849621 28849894 -56588586 - L1MEd LINE L1 -4869 1250 997 2158 104 10 10 chr17 28849894 28850192 -56588288 - AluSg SINE Alu -8 302 5 1078 276 97 27 chr17 28850192 28850586 -56587894 - L1MEd LINE L1 -5122 997 615 8526 168 68 38 chr17 28850586 28852288 -56586192 + MER52A LTR ERV1 4 1755 0 1078 276 97 27 chr17 28852288 28852583 -56585897 - L1MEd LINE L1 -5504 615 342 322 273 101 57 chr17 28852703 28852912 -56585568 - L1MEd LINE L1 -5891 228 11 383 291 125 66 chr17 28852924 28853794 -56584686 - L1M4 LINE L1 -2399 3747 2930 1899 140 0 38 chr17 28853794 28854086 -56584394 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr17 28854088 28854130 -56584350 + (CA)n Simple_repeat Simple_repeat 2 43 0 383 291 125 66 chr17 28854130 28854195 -56584285 - L1M4 LINE L1 -3216 2930 2870 1791 137 23 23 chr17 28854195 28854495 -56583985 - AluSx SINE Alu -11 301 2 383 291 125 66 chr17 28854495 28855007 -56583473 - L1M4 LINE L1 -3276 2870 2210 279 301 15 52 chr17 28855250 28855386 -56583094 + MLT1J LTR MaLR 1 131 -380 722 252 35 22 chr17 28855451 28855681 -56582799 + MLT1J LTR MaLR 279 511 0 1534 181 60 3 chr17 28856405 28856687 -56581793 - AluJb SINE Alu -14 298 1 716 151 118 0 chr17 28856687 28856806 -56581674 - AluJo SINE Alu -177 135 3 21 0 0 0 chr17 28857646 28857667 -56580813 + AT_rich Low_complexity Low_complexity 1 21 0 3338 46 2 2 chr17 28858281 28858695 -56579785 + L1PA5 LINE L1 5737 6150 -4 1882 133 14 10 chr17 28859528 28859822 -56578658 - AluJo SINE Alu -17 295 1 198 191 0 0 chr17 28860019 28860066 -56578414 + (CA)n Simple_repeat Simple_repeat 2 48 0 904 191 12 12 chr17 28860133 28860306 -56578174 + FRAM SINE Alu 1 173 -3 1933 65 0 51 chr17 28860820 28861112 -56577368 + AluY SINE Alu 35 311 0 1385 144 19 41 chr17 28861123 28861394 -56577086 - MER2 DNA MER2_type -80 265 1 231 288 27 14 chr17 28861803 28861876 -56576604 + L2 LINE L2 633 706 -2608 2966 264 100 17 chr17 28861881 28862662 -56575818 + L2 LINE L2 1764 2479 -834 2198 80 0 14 chr17 28862662 28862988 -56575492 - AluY SINE Alu 0 322 1 2966 264 100 17 chr17 28862988 28863627 -56574853 + L2 LINE L2 2479 3299 -14 186 191 43 21 chr17 28864693 28864740 -56573740 - MIR SINE MIR -93 115 68 273 333 0 0 chr17 28865615 28865714 -56572766 + (TA)n Simple_repeat Simple_repeat 2 100 0 542 235 18 48 chr17 28865877 28866043 -56572437 + MIR3 SINE MIR 31 191 -17 852 237 135 53 chr17 28866459 28866655 -56571825 + MLT1D LTR MaLR 1 179 -326 2348 89 0 0 chr17 28866655 28866947 -56571533 + AluSx SINE Alu 12 303 -9 852 237 135 53 chr17 28866947 28867201 -56571279 + MLT1D LTR MaLR 179 488 -17 196 253 52 154 chr17 28867407 28867640 -56570840 + L2 LINE L2 2919 3127 -145 566 249 158 18 chr17 28868287 28868508 -56569972 + MLT1J2 LTR MaLR 55 306 -144 1851 159 14 0 chr17 28868555 28868838 -56569642 + AluSx SINE Alu 1 287 -25 352 331 60 24 chr17 28868993 28869159 -56569321 - MIR SINE MIR -70 192 21 2211 84 0 11 chr17 28869444 28869756 -56568724 + AluY SINE Alu 1 309 0 256 149 43 0 chr17 28869927 28869974 -56568506 + MIR SINE MIR 147 195 -67 34 42 0 0 chr17 28870215 28870263 -56568217 + AT_rich Low_complexity Low_complexity 1 48 0 5150 172 43 27 chr17 28870550 28872518 -56565962 + L1PB4 LINE L1 4156 6154 -2 2211 110 7 0 chr17 28872737 28873036 -56565444 + AluSx SINE Alu 1 301 -11 226 286 0 32 chr17 28873202 28873265 -56565215 - L2 LINE L2 0 3272 3212 268 338 0 0 chr17 28873393 28873473 -56565007 + L2 LINE L2 3230 3309 -4 1060 136 38 0 chr17 28876437 28876621 -56561859 + MER20 DNA MER1_type 17 207 -12 1663 179 68 97 chr17 28877157 28877867 -56560613 + L1MC5 LINE L1 7238 7926 -35 930 304 88 34 chr17 28880413 28880979 -56557501 + L2 LINE L2 1796 2392 -922 639 276 75 114 chr17 28881019 28881501 -56556979 - L2 LINE L2 -4 3268 2806 590 298 38 72 chr17 28881518 28881753 -56556727 + L2 LINE L2 2477 2719 -595 2382 104 7 0 chr17 28881753 28882062 -56556418 + AluSx SINE Alu 2 312 0 2258 81 7 10 chr17 28882067 28882362 -56556118 + AluY SINE Alu 1 294 -17 590 298 38 72 chr17 28882362 28882439 -56556041 + L2 LINE L2 2723 2784 -530 404 305 70 18 chr17 28882505 28882793 -56555687 + L1ME LINE L1 5182 5483 -751 2278 98 7 3 chr17 28882806 28883101 -56555379 + AluSx SINE Alu 4 299 -13 347 262 67 24 chr17 28883106 28883270 -56555210 + L1ME LINE L1 5611 5781 -340 2236 134 35 32 chr17 28883300 28883734 -56554746 + L1MA7 LINE L1 5856 6290 -1 3143 149 79 4 chr17 28884761 28885694 -56552786 - L1PBa LINE L1 -3324 3538 2532 2522 135 19 9 chr17 28885694 28886115 -56552365 + MER57B LTR ERV1 1 425 -9 6886 85 21 26 chr17 28886119 28886575 -56551905 - L1PBa LINE L1 -4328 2535 2078 1712 154 0 7 chr17 28886575 28886855 -56551625 - AluY SINE Alu -33 278 1 6886 85 21 26 chr17 28886855 28887492 -56550988 - L1PBa LINE L1 -4785 2078 1447 1752 255 38 65 chr17 28887762 28888867 -56549613 - L2 LINE L2 -1 3312 2237 2376 78 7 0 chr17 28889308 28889615 -56548865 + AluY SINE Alu 1 309 -2 897 165 48 37 chr17 28889616 28889804 -56548676 + AluJb SINE Alu 123 312 0 237 86 0 0 chr17 28889829 28889864 -56548616 + U2 snRNA snRNA 1 35 -153 214 287 161 23 chr17 28889886 28889973 -56548507 - MIR3 SINE MIR -99 109 11 554 261 89 6 chr17 28891058 28891215 -56547265 + MIR SINE MIR 23 192 -70 707 245 117 5 chr17 28892155 28892351 -56546129 - MIR SINE MIR 0 262 45 2810 171 89 26 chr17 28892546 28893288 -56545192 + L1MA9 LINE L1 5490 6278 -34 2611 74 8 11 chr17 28893306 28893670 -56544810 - L1PA13 LINE L1 -2 6161 5799 285 29 0 0 chr17 28893970 28894004 -56544476 + (CA)n Simple_repeat Simple_repeat 1 34 0 2722 27 0 6 chr17 28894299 28894636 -56543844 + L1P2 LINE L1 5482 5816 -339 3358 141 11 51 chr17 28895282 28895950 -56542530 - L1MB3 LINE L1 -1 6182 5542 21 36 0 0 chr17 28895996 28896024 -56542456 + AT_rich Low_complexity Low_complexity 1 28 0 265 231 39 26 chr17 28896509 28896587 -56541893 - L2 LINE L2 0 3272 3194 1833 152 3 44 chr17 28896809 28897125 -56541355 - AluJo SINE Alu -9 303 1 1888 177 0 16 chr17 28897288 28897605 -56540875 + AluJb SINE Alu 1 312 0 201 231 0 0 chr17 28898031 28898070 -56540410 + GA-rich Low_complexity Low_complexity 2 40 0 543 288 49 24 chr17 28898179 28898384 -56540096 + MIR SINE MIR 21 230 -32 2445 83 0 0 chr17 28898800 28899102 -56539378 - AluY SINE Alu -9 302 1 505 224 0 10 chr17 28899405 28899503 -56538977 + MIR SINE MIR 45 141 -121 229 167 0 0 chr17 28899766 28899808 -56538672 - MLT1J LTR MaLR -338 173 132 928 64 0 0 chr17 28899895 28900020 -56538460 - L1PA5 LINE L1 0 6154 6030 255 233 27 27 chr17 28900358 28900431 -56538049 - L2 LINE L2 -56 3257 3185 259 325 98 56 chr17 28900499 28900805 -56537675 + L2 LINE L2 2430 2756 -558 2191 121 0 0 chr17 28900805 28901110 -56537370 + AluSc SINE Alu 1 305 -4 259 325 98 56 chr17 28901110 28901179 -56537301 + L2 LINE L2 2756 2821 -493 252 388 69 47 chr17 28901262 28901582 -56536898 + L2 LINE L2 2946 3272 0 * 710 323 146 16 chr17 28901581 28902012 -56536468 - L3 LINE CR1 -175 1402 916 276 299 150 14 chr17 28902239 28902386 -56536094 - MIR SINE MIR -10 252 86 2134 208 30 132 chr17 28902423 28903402 -56535078 - L1ME3 LINE L1 -30 6132 5254 376 312 71 30 chr17 28903687 28903982 -56534498 - L1ME LINE L1 -482 5639 5333 339 316 44 71 chr17 28904493 28904881 -56533599 - L2 LINE L2 -5 3308 2620 365 367 94 0 chr17 28906182 28906362 -56532118 - L2 LINE L2 -56 3216 3020 219 227 0 45 chr17 28906682 28906748 -56531732 + CT-rich Low_complexity Low_complexity 3 65 0 318 322 46 40 chr17 28906761 28906935 -56531545 - MLT1K LTR MaLR -240 348 174 2092 144 17 6 chr17 28906937 28907283 -56531197 + MER47A DNA MER2_type 1 350 -16 1832 169 10 10 chr17 28907283 28907579 -56530901 + AluJb SINE Alu 1 296 -16 404 333 88 54 chr17 28907700 28908382 -56530098 - L2 LINE L2 -1640 1674 970 209 189 0 0 chr17 28908615 28908652 -56529828 + CT-rich Low_complexity Low_complexity 1 37 0 2454 87 0 6 chr17 28908984 28909296 -56529184 - AluSx SINE Alu -2 310 1 21 57 0 0 chr17 28910068 28910103 -56528377 + AT_rich Low_complexity Low_complexity 1 35 0 226 167 0 21 chr17 28910103 28910151 -56528329 + (CA)n Simple_repeat Simple_repeat 2 48 0 703 78 39 39 chr17 28910358 28910538 -56527942 + (TA)n Simple_repeat Simple_repeat 1 180 0 1693 162 3 21 chr17 28910557 28910841 -56527639 + AluJo SINE Alu 12 290 -22 23 33 0 0 chr17 28910853 28910883 -56527597 + AT_rich Low_complexity Low_complexity 1 30 0 334 186 29 49 chr17 28911157 28911259 -56527221 + L1ME4a LINE L1 5964 6063 -58 881 164 68 0 chr17 28911731 28911908 -56526572 - MER3 DNA MER1_type 0 209 21 1697 166 7 30 chr17 28912811 28913112 -56525368 + AluJo SINE Alu 4 297 -15 1921 154 3 3 chr17 28913642 28913928 -56524552 - AluSx SINE Alu -26 286 1 863 195 169 16 chr17 28914287 28914594 -56523886 + L1MC4 LINE L1 7688 8041 -1 6689 18 3 0 chr17 28915171 28915939 -56522541 + L1PA2 LINE L1 5382 6151 -4 22 70 0 0 chr17 28916569 28916612 -56521868 + AT_rich Low_complexity Low_complexity 1 43 0 210 37 0 0 chr17 28917117 28917144 -56521336 + (CAA)n Simple_repeat Simple_repeat 2 28 0 261 334 173 20 chr17 28917166 28917507 -56520973 + L2 LINE L2 1214 1606 -1708 1964 132 39 27 chr17 28917735 28918068 -56520412 - MER1B DNA MER1_type 0 337 1 1455 209 117 32 chr17 28919546 28919957 -56518523 - L1ME3A LINE L1 -9 6161 5716 489 336 124 24 chr17 28920581 28921170 -56517310 + L2 LINE L2 1541 2188 -1126 293 306 110 50 chr17 28921352 28921571 -56516909 + MIR SINE MIR 25 256 -6 2411 70 0 7 chr17 28921660 28921961 -56516519 + AluY SINE Alu 1 299 -12 320 351 48 12 chr17 28922449 28922614 -56515866 - L3 LINE CR1 -12 1565 1395 2218 218 120 32 chr17 28922618 28923701 -56514779 - L1MC4 LINE L1 -245 7797 6460 452 314 186 9 chr17 28923949 28924175 -56514305 - L3 LINE CR1 -219 1358 1093 973 257 158 54 chr17 28924181 28924733 -56513747 + MLT1L LTR MaLR 7 615 0 2365 89 10 3 chr17 28925439 28925743 -56512737 - AluY SINE Alu -5 306 1 1839 150 7 14 chr17 28926117 28926411 -56512069 + AluJb SINE Alu 1 292 -20 363 302 101 57 chr17 28926454 28926752 -56511728 + L2 LINE L2 2942 3252 -61 326 264 139 40 chr17 28926781 28926982 -56511498 + L1ME4a LINE L1 5822 6042 -79 190 306 222 14 chr17 28927256 28927400 -56511080 - MER5B DNA MER1_type 0 178 5 2403 85 0 0 chr17 28978553 28978859 -56459621 - AluSq SINE Alu -7 306 1 316 344 104 32 chr17 28980201 28980576 -56457904 - L2 LINE L2 -36 3236 2835 2139 118 0 0 chr17 28984045 28984349 -56454131 - AluSx SINE Alu -8 304 1 2212 103 3 6 chr17 28985582 28985893 -56452587 + AluSx SINE Alu 1 310 -2 372 222 160 28 chr17 28986960 28987104 -56451376 - MER103 DNA DNA -2 164 2 777 285 109 8 chr17 28987723 28987979 -56450501 + MER102a DNA MER1_type 39 320 -10 1788 134 36 0 chr17 28988232 28988509 -56449971 + AluJb SINE Alu 1 287 -25 22 0 0 0 chr17 28988514 28988536 -56449944 + AT_rich Low_complexity Low_complexity 1 22 0 364 219 79 18 chr17 28990047 28990161 -56448319 + MIR SINE MIR 17 137 -125 274 323 73 0 chr17 28990757 28990853 -56447627 - L2 LINE L2 -9 3263 3161 806 133 0 16 chr17 28991032 28991160 -56447320 + AluJb SINE Alu 161 286 -26 344 330 28 0 chr17 28991314 28991420 -56447060 - MIR SINE MIR -104 158 50 381 191 18 73 chr17 28991512 28991622 -56446858 + MER112 DNA MER1_type 148 251 -9 233 287 139 33 chr17 28991775 28991897 -56446583 - L2 LINE L2 -4 3309 3175 232 324 28 19 chr17 28992185 28992293 -56446187 - L2 LINE L2 -463 2851 2743 548 240 118 14 chr17 28992333 28992706 -56445774 - L1M4 LINE L1 -653 5521 5107 181 247 75 32 chr17 28992945 28993038 -56445442 - L2 LINE L2 -260 3012 2916 1137 275 116 73 chr17 28993038 28994095 -56444385 - L2 LINE L2 -43 3229 2148 267 241 13 25 chr17 28994143 28994222 -56444258 + L2 LINE L2 3220 3297 -16 662 0 0 13 chr17 28994475 28994554 -56443926 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1758 166 0 16 chr17 28994554 28994858 -56443622 - AluJb SINE Alu -11 301 1 413 274 36 135 chr17 28995582 28995700 -56442780 - L2 LINE L2 0 3272 3195 671 216 58 23 chr17 28995700 28995871 -56442609 - MER5B DNA MER1_type 0 178 2 413 274 36 135 chr17 28995871 28996026 -56442454 - L2 LINE L2 -77 3195 3026 527 240 75 27 chr17 28996165 28996311 -56442169 + MER63A DNA MER1_type 58 210 0 232 341 79 43 chr17 28996608 28996772 -56441708 + L2 LINE L2 3113 3282 -31 23 0 0 0 chr17 28996796 28996819 -56441661 + AT_rich Low_complexity Low_complexity 1 23 0 207 116 70 0 chr17 28996838 28996881 -56441599 + T-rich Low_complexity Low_complexity 1 46 0 4714 28 0 2 chr17 28996883 28997426 -56441054 - L1PA5 LINE L1 -3 6151 5610 280 264 81 11 chr17 28997443 28997530 -56440950 + MIR SINE MIR 6 98 -164 207 69 0 0 chr17 28997534 28997563 -56440917 + (TG)n Simple_repeat Simple_repeat 1 29 0 199 357 14 0 chr17 28997564 28997634 -56440846 + MIR SINE MIR 183 253 -9 2039 130 0 0 chr17 28997642 28997934 -56440546 + AluSx SINE Alu 1 292 -20 2248 109 41 49 chr17 28998998 28999365 -56439115 + THE1B LTR MaLR 1 364 0 1406 159 41 25 chr17 28999464 28999571 -56438909 - L1MA4 LINE L1 -2 6298 6194 2787 112 40 7 chr17 28999571 28999991 -56438489 - MER57B LTR ERV1 0 434 1 1406 159 41 25 chr17 28999991 29000198 -56438282 - L1MA4 LINE L1 -106 6194 5979 205 283 61 10 chr17 29000410 29000509 -56437971 - MIR SINE MIR -77 131 28 493 287 82 49 chr17 29000768 29000974 -56437506 - MIR SINE MIR -17 245 34 817 217 42 0 chr17 29001705 29001871 -56436609 - MIR SINE MIR -58 204 32 443 252 19 65 chr17 29001911 29002012 -56436468 + MIR SINE MIR 49 142 -120 1771 137 7 23 chr17 29002012 29002311 -56436169 + AluJo SINE Alu 1 294 -18 443 252 19 65 chr17 29002311 29002364 -56436116 + MIR SINE MIR 142 196 -66 259 270 151 63 chr17 29002465 29002591 -56435889 - MIR3 SINE MIR -2 206 70 1089 248 42 17 chr17 29002591 29003045 -56435435 + MLT1J LTR MaLR 1 509 -2 312 321 28 0 chr17 29003554 29003663 -56434817 - L1MC4 LINE L1 0 8042 7931 21 0 0 0 chr17 29003861 29003882 -56434598 + AT_rich Low_complexity Low_complexity 1 21 0 383 199 25 7 chr17 29003882 29004020 -56434460 - L1MB8 LINE L1 -341 5837 5695 377 250 11 22 chr17 29004068 29004160 -56434320 + MER58B DNA MER1_type 1 91 -250 2071 116 30 0 chr17 29004207 29004509 -56433971 + AluSx SINE Alu 1 311 -1 2462 141 25 0 chr17 29004518 29004923 -56433557 - L1MB3 LINE L1 -7 6176 5762 1154 165 93 0 chr17 29004923 29005159 -56433321 + MER58B DNA MER1_type 84 341 0 244 333 11 0 chr17 29005171 29005261 -56433219 - L1MB3 LINE L1 -526 5644 5554 1543 173 19 10 chr17 29005410 29005717 -56432763 + AluJo SINE Alu 1 310 -2 496 100 11 11 chr17 29006135 29006225 -56432255 + (TTCC)n Simple_repeat Simple_repeat 4 93 0 1717 179 3 0 chr17 29006252 29006548 -56431932 - AluJb SINE Alu -15 297 1 234 191 0 0 chr17 29006548 29006595 -56431885 + CT-rich Low_complexity Low_complexity 3 49 0 998 149 45 68 chr17 29006597 29006818 -56431662 - AluJo SINE Alu -13 299 84 341 282 12 12 chr17 29007948 29008033 -56430447 - L2 LINE L2 0 3272 3188 2092 119 0 0 chr17 29008300 29008594 -56429886 - AluSx SINE Alu -16 296 3 192 77 0 0 chr17 29009577 29009603 -56428877 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 268 37 37 chr17 29009871 29009953 -56428527 - MIR SINE MIR -171 91 10 292 244 99 46 chr17 29010272 29010403 -56428077 - MIR SINE MIR -7 255 118 410 281 90 6 chr17 29011157 29011324 -56427156 + HERVI LTR ERV1 187 367 -6282 527 288 35 39 chr17 29011561 29011790 -56426690 + HERVI LTR ERV1 776 1003 -6782 2693 57 0 0 chr17 29012006 29012339 -56426141 - L1PA5 LINE L1 -3875 2271 1939 25552 42 2 6 chr17 29012339 29016245 -56422235 + L1PA5 LINE L1 2263 6154 0 831 310 63 28 chr17 29016245 29016861 -56421619 + HERVI LTR ERV1 1299 1936 -5849 488 194 108 23 chr17 29016862 29016991 -56421489 + LTR18B LTR ERVL 353 492 -122 1939 320 17 28 chr17 29017012 29017950 -56420530 + HERVI LTR ERV1 4829 5756 -2029 379 236 34 34 chr17 29018175 29018294 -56420186 + HERVI LTR ERV1 3035 4857 -1792 1651 307 59 40 chr17 29018670 29019420 -56419060 + HERVI LTR ERV1 5290 6024 -1761 2244 110 0 10 chr17 29019420 29019719 -56418761 - AluSx SINE Alu -16 296 1 1651 307 59 40 chr17 29019719 29020178 -56418302 + HERVI LTR ERV1 6024 7647 -138 280 333 18 35 chr17 29020808 29020922 -56417558 - MIR3 SINE MIR -48 160 49 966 235 28 5 chr17 29020942 29021155 -56417325 - MER20 DNA MER1_type -1 218 1 1560 136 86 76 chr17 29021180 29021482 -56416998 + AluSx SINE Alu 5 309 -3 1790 170 7 20 chr17 29022280 29022580 -56415900 - AluJo SINE Alu -16 296 1 233 344 76 23 chr17 29022583 29022714 -56415766 - MIR3 SINE MIR -67 141 4 234 128 0 0 chr17 29023426 29023465 -56415015 + (T)n Simple_repeat Simple_repeat 1 39 0 6630 25 0 0 chr17 29023487 29024284 -56414196 + L1PA2 LINE L1 5353 6149 -6 24 0 0 0 chr17 29024289 29024313 -56414167 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 29024373 29024395 -56414085 + AT_rich Low_complexity Low_complexity 1 22 0 2304 108 3 13 chr17 29024486 29024800 -56413680 - AluSx SINE Alu -1 311 1 942 232 176 49 chr17 29024800 29024990 -56413490 - L1MD2 LINE L1 -13 6346 6182 312 27 0 0 chr17 29024990 29025027 -56413453 + (TG)n Simple_repeat Simple_repeat 2 38 0 1482 112 182 8 chr17 29025027 29025269 -56413211 - AluSx SINE Alu -28 284 1 942 232 176 49 chr17 29025269 29025383 -56413097 - L1MD2 LINE L1 -176 6183 6002 222 367 28 10 chr17 29025781 29026031 -56412449 - L2 LINE L2 -466 2848 2554 525 254 61 23 chr17 29026394 29026620 -56411860 - MIR SINE MIR 0 262 30 778 37 9 9 chr17 29026802 29026909 -56411571 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 292 162 0 54 chr17 29026946 29026987 -56411493 - MLT2B1 LTR ERVL 0 520 483 315 85 0 0 chr17 29026987 29027034 -56411446 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 292 162 0 54 chr17 29027034 29027066 -56411414 - MLT2B1 LTR ERVL -37 483 451 * 2137 123 3 3 chr17 29027045 29027355 -56411125 - THE1B LTR MaLR -54 310 1 10304 97 28 38 chr17 29027355 29028950 -56409530 - THE1B-int LTR MaLR 0 1580 1 180 111 0 0 chr17 29028963 29028990 -56409490 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr17 29028992 29029025 -56409455 + (TTCCC)n Simple_repeat Simple_repeat 2 34 0 2246 130 0 3 chr17 29029033 29029341 -56409139 - AluSp SINE Alu -6 307 1 2532 102 3 3 chr17 29029342 29029694 -56408786 - THE1B LTR MaLR -12 352 1 196 175 32 0 chr17 29029695 29029758 -56408722 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 1437 201 86 60 chr17 29029758 29029780 -56408700 - MLT2B1 LTR ERVL -40 480 460 1890 151 10 22 chr17 29029780 29030092 -56408388 - AluJo SINE Alu -4 308 1 1437 201 86 60 chr17 29030092 29030537 -56407943 - MLT2B1 LTR ERVL -60 460 1 582 250 7 9 chr17 29031311 29031456 -56407024 - MER5B DNA MER1_type -1 177 47 413 318 8 0 chr17 29031870 29031999 -56406481 - MIR SINE MIR -49 213 84 200 273 39 26 chr17 29032035 29032112 -56406368 - MIR SINE MIR -94 114 37 267 163 0 20 chr17 29032158 29032207 -56406273 - MER5B DNA MER1_type -16 162 115 1930 143 19 46 chr17 29032207 29032460 -56406020 + L1MB1 LINE L1 5338 5579 -589 2105 141 0 0 chr17 29032460 29032750 -56405730 + AluSg1 SINE Alu 3 292 -17 1930 143 19 46 chr17 29032750 29032867 -56405613 + L1MB1 LINE L1 5579 5698 -470 1603 138 39 116 chr17 29032867 29033044 -56405436 + THE1C LTR MaLR 1 131 -244 1902 121 67 11 chr17 29033044 29033326 -56405154 - AluSx SINE Alu -14 298 1 1603 138 39 116 chr17 29033326 29033554 -56404926 + THE1C LTR MaLR 131 375 0 9196 107 15 37 chr17 29033555 29034975 -56403505 - THE1C-int LTR MaLR -191 1389 1 1760 125 55 76 chr17 29034975 29035358 -56403122 - THE1C LTR MaLR 0 375 1 2073 152 25 98 chr17 29035358 29035418 -56403062 + L1MB1 LINE L1 5694 5757 -411 2530 165 7 2 chr17 29035418 29035842 -56402638 + MSTB LTR MaLR 1 426 0 2073 152 25 98 chr17 29035842 29036125 -56402355 + L1MB1 LINE L1 5757 5990 -178 2417 109 0 0 chr17 29036125 29036437 -56402043 + AluSx SINE Alu 1 312 0 2073 152 25 98 chr17 29036437 29036604 -56401876 + L1MB1 LINE L1 5990 6168 0 240 183 70 84 chr17 29036613 29036684 -56401796 - MER5B DNA MER1_type -48 130 61 385 327 142 4 chr17 29036739 29036965 -56401515 - MIR SINE MIR 0 262 6 205 330 50 10 chr17 29037098 29037198 -56401282 + L3 LINE CR1 1333 1436 -141 474 101 0 0 chr17 29038068 29038137 -56400343 + (TG)n Simple_repeat Simple_repeat 1 69 0 203 0 37 0 chr17 29038576 29038603 -56399877 + (GA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 29038661 29038683 -56399797 + (A)n Simple_repeat Simple_repeat 1 22 0 252 288 56 24 chr17 29038712 29038837 -56399643 + MIR SINE MIR 120 248 -14 513 295 101 9 chr17 29040713 29040930 -56397550 - MIR SINE MIR -23 239 3 197 319 90 32 chr17 29041324 29041512 -56396968 - L2 LINE L2 -2782 532 334 204 125 0 0 chr17 29042232 29042264 -56396216 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 2386 96 0 3 chr17 29042680 29042982 -56395498 + AluSx SINE Alu 1 301 -11 243 244 116 0 chr17 29042998 29043084 -56395396 - L2 LINE L2 -4 3309 3214 189 382 9 27 chr17 29043070 29043180 -56395300 + MIR SINE MIR 37 144 -118 * 288 0 0 0 chr17 29043787 29043819 -56394661 + (TG)n Simple_repeat Simple_repeat 2 33 0 204 111 0 0 chr17 29043835 29043871 -56394609 + (CA)n Simple_repeat Simple_repeat 2 37 0 711 156 45 96 chr17 29044570 29044769 -56393711 + MER53 DNA DNA 1 189 0 302 263 25 34 chr17 29045680 29045798 -56392682 - MIR SINE MIR -60 202 86 26 64 0 0 chr17 29045891 29045938 -56392542 + AT_rich Low_complexity Low_complexity 1 47 0 4451 165 25 21 chr17 29045938 29046130 -56392350 - L1PB4 LINE L1 -2 6154 5964 1978 132 36 7 chr17 29046130 29046411 -56392069 - AluSg SINE Alu -21 289 1 4451 165 25 21 chr17 29046411 29047053 -56391427 - L1PB4 LINE L1 -192 5964 5326 1953 172 3 0 chr17 29047053 29047349 -56391131 - AluJb SINE Alu -15 297 1 4451 165 25 21 chr17 29047349 29048137 -56390343 - L1PB4 LINE L1 -830 5326 4523 280 335 92 42 chr17 29048605 29048942 -56389538 + L2 LINE L2 2461 2814 -500 194 369 24 0 chr17 29049094 29049178 -56389302 + L2 LINE L2 2895 2980 -333 521 74 0 53 chr17 29049649 29049744 -56388736 - L1PA6 LINE L1 0 6154 6065 558 71 0 0 chr17 29049744 29049814 -56388666 - AluJ/FRAM SINE Alu -27 285 216 409 160 13 27 chr17 29049807 29049882 -56388598 - AluSc SINE Alu -127 182 109 * 453 297 121 62 chr17 29049884 29050207 -56388273 + L2 LINE L2 2970 3311 -2 301 252 44 117 chr17 29050549 29050755 -56387725 + MIR SINE MIR 66 256 -6 226 245 0 19 chr17 29050891 29050944 -56387536 + GA-rich Low_complexity Low_complexity 3 54 0 278 299 52 58 chr17 29051352 29051425 -56387055 - MER117 DNA MER1_type -44 153 81 2087 125 35 0 chr17 29051425 29051714 -56386766 - AluSx SINE Alu -13 299 1 278 299 52 58 chr17 29051714 29051794 -56386686 - MER117 DNA MER1_type -116 81 1 315 298 83 0 chr17 29051845 29051966 -56386514 - MIR SINE MIR -109 153 23 1328 87 3 9 chr17 29052304 29052534 -56385946 + (TTTC)n Simple_repeat Simple_repeat 1 231 -367 180 0 0 0 chr17 29052534 29052554 -56385926 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1328 87 3 9 chr17 29052554 29052727 -56385753 + (TTTC)n Simple_repeat Simple_repeat 231 598 0 186 133 0 0 chr17 29052745 29052775 -56385705 + (TTTC)n Simple_repeat Simple_repeat 4 33 0 2377 99 0 0 chr17 29052780 29053084 -56385396 - AluSc SINE Alu 0 309 6 371 198 58 12 chr17 29053130 29053216 -56385264 + L2 LINE L2 3177 3266 -6 1222 137 11 6 chr17 29054155 29054330 -56384150 - AluJb SINE Alu -136 176 1 319 345 27 0 chr17 29054482 29054592 -56383888 - MIR SINE MIR -50 212 100 541 250 23 52 chr17 29054632 29054795 -56383685 - MIR3 SINE MIR -11 197 38 2387 86 3 10 chr17 29054795 29055109 -56383371 + AluSx SINE Alu 1 312 0 207 100 0 0 chr17 29056463 29056493 -56381987 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 369 323 30 15 chr17 29057315 29057448 -56381032 + MIR3 SINE MIR 30 164 -44 2144 188 12 60 chr17 29057470 29057635 -56380845 + MLT1D LTR MaLR 15 186 -319 2159 130 0 0 chr17 29057635 29057927 -56380553 + AluSx SINE Alu 1 292 -20 2144 188 12 60 chr17 29057927 29058277 -56380203 + MLT1D LTR MaLR 186 505 0 236 306 19 37 chr17 29058543 29058651 -56379829 - MIR SINE MIR -62 146 41 241 256 12 12 chr17 29059619 29059701 -56378779 + A-rich Low_complexity Low_complexity 3 84 0 307 290 155 25 chr17 29061299 29061499 -56376981 - MIR SINE MIR -12 250 25 220 227 227 0 chr17 29061884 29061950 -56376530 + MIR SINE MIR 63 143 -65 279 313 25 69 chr17 29064765 29064925 -56373555 + MER5B DNA MER1_type 25 177 -1 265 298 30 96 chr17 29065073 29065271 -56373209 + MIR3 SINE MIR 17 201 -7 375 268 6 22 chr17 29065757 29065936 -56372544 + (TG)n Simple_repeat Simple_repeat 1 176 0 207 0 0 0 chr17 29066270 29066293 -56372187 + (TC)n Simple_repeat Simple_repeat 2 24 0 215 158 0 18 chr17 29066314 29066371 -56372109 + GA-rich Low_complexity Low_complexity 1 56 0 448 267 46 0 chr17 29066727 29066858 -56371622 - MIR SINE MIR -66 196 60 282 309 24 24 chr17 29067378 29067501 -56370979 - MIR3 SINE MIR -2 206 84 501 302 24 0 chr17 29067802 29067971 -56370509 - MIR3 SINE MIR -7 201 29 234 325 60 0 chr17 29068628 29068745 -56369735 + L2 LINE L2 2583 2706 -608 640 229 19 25 chr17 29068748 29068905 -56369575 - MER3 DNA MER1_type -49 160 5 697 275 65 73 chr17 29069129 29069411 -56369069 - L2 LINE L2 0 3313 3033 828 176 0 0 chr17 29069411 29069542 -56368938 - FLAM_C SINE Alu -1 132 2 697 275 65 73 chr17 29069542 29069641 -56368839 - L2 LINE L2 -280 3033 2935 2408 88 0 10 chr17 29069680 29069988 -56368492 + AluY SINE Alu 1 305 -6 373 328 8 16 chr17 29070106 29070234 -56368246 + L2 LINE L2 3136 3262 -10 1888 159 169 12 chr17 29071055 29071458 -56367022 + MER31B LTR ERV1 1 466 0 286 318 0 24 chr17 29072121 29072247 -56366233 + CT-rich Low_complexity Low_complexity 1 123 0 282 295 85 35 chr17 29072794 29072994 -56365486 - MIR SINE MIR -33 229 20 1040 190 20 91 chr17 29073443 29073773 -56364707 - MLT1D LTR MaLR -50 455 146 287 266 83 0 chr17 29074046 29074155 -56364325 - MIR SINE MIR -122 140 23 826 156 8 0 chr17 29075028 29075156 -56363324 - FLAM_A SINE Alu -1 132 4 3824 213 27 23 chr17 29075595 29076584 -56361896 - L1ME2 LINE L1 0 6098 5109 1538 189 30 44 chr17 29076582 29076948 -56361532 - L1ME2 LINE L1 0 6164 5804 * 2957 242 55 45 chr17 29076945 29078915 -56359565 - L1ME2 LINE L1 -1947 4133 1705 2076 150 3 0 chr17 29078915 29079222 -56359258 - AluSx SINE Alu -4 308 1 2957 242 55 45 chr17 29079222 29079442 -56359038 - L1ME2 LINE L1 -4375 1705 1489 1623 142 29 46 chr17 29079462 29079570 -56358910 + AluJo SINE Alu 1 109 -203 7289 118 65 22 chr17 29079570 29080795 -56357685 + MER52C LTR ERV1 2 1278 0 1623 142 29 46 chr17 29080795 29080967 -56357513 + AluJo SINE Alu 109 276 -36 204 40 0 0 chr17 29080972 29080997 -56357483 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1455 275 49 52 chr17 29081022 29082015 -56356465 - L1ME2 LINE L1 -4744 1517 528 749 279 130 43 chr17 29082189 29082634 -56355846 - L1ME2 LINE L1 -5577 493 10 375 234 29 38 chr17 29082679 29082797 -56355683 - MIR SINE MIR -64 144 46 1342 167 114 26 chr17 29082918 29083182 -56355298 - AluJo SINE Alu -25 287 1 472 219 17 25 chr17 29083299 29083418 -56355062 + MIR3 SINE MIR 82 199 -9 1130 87 50 0 chr17 29083426 29083587 -56354893 + L1PA14 LINE L1 5992 6160 -1 207 0 0 0 chr17 29083864 29083887 -56354593 + (T)n Simple_repeat Simple_repeat 1 23 0 287 301 44 18 chr17 29084052 29084165 -56354315 + L3 LINE CR1 1204 1319 -258 542 313 27 40 chr17 29084235 29084459 -56354021 + L3 LINE CR1 1330 1550 -27 211 193 0 140 chr17 29084551 29084642 -56353838 + MIR SINE MIR 66 145 -63 360 252 84 7 chr17 29084862 29085005 -56353475 - L2 LINE L2 -991 2323 2170 282 273 70 64 chr17 29085886 29086073 -56352407 + MIR SINE MIR 18 205 -57 250 279 13 13 chr17 29086269 29086348 -56352132 + CT-rich Low_complexity Low_complexity 5 83 0 230 301 55 0 chr17 29087443 29087516 -56350964 - L2 LINE L2 -37 3235 3159 532 253 27 7 chr17 29087625 29087775 -56350705 + MIR SINE MIR 72 224 -38 210 222 0 0 chr17 29087935 29087980 -56350500 + L2 LINE L2 3269 3313 0 611 191 0 0 chr17 29088064 29088158 -56350322 - L1M1 LINE L1 -7112 453 360 252 182 18 0 chr17 29088288 29088343 -56350137 + MIR SINE MIR 84 139 -69 247 222 0 16 chr17 29088859 29088922 -56349558 - MIR SINE MIR -50 212 151 748 271 24 5 chr17 29088962 29089169 -56349311 - MIR SINE MIR -4 258 48 330 273 147 33 chr17 29089345 29089403 -56349077 - MIR SINE MIR -58 204 154 2354 81 7 0 chr17 29089403 29089698 -56348782 - AluY SINE Alu -13 298 2 330 273 147 33 chr17 29089698 29089774 -56348706 - MIR SINE MIR -108 154 53 211 289 66 13 chr17 29089774 29089850 -56348630 + MIR3 SINE MIR 4 83 -125 243 113 0 113 chr17 29089956 29090018 -56348462 - MER117 DNA MER1_type -28 169 115 751 139 7 7 chr17 29090676 29090820 -56347660 + (TCCA)n Simple_repeat Simple_repeat 1 144 0 2025 123 41 0 chr17 29090842 29091135 -56347345 - AluSx SINE Alu -7 305 1 526 309 54 60 chr17 29091136 29091485 -56346995 - L2 LINE L2 -11 3261 2915 317 248 109 0 chr17 29092406 29092507 -56345973 + MER91C DNA MER1_type 1 112 -28 1942 152 7 3 chr17 29093817 29094114 -56344366 - AluJo SINE Alu -14 298 1 1288 202 79 66 chr17 29094398 29094779 -56343701 + MLT1B LTR MaLR 1 386 -4 259 289 13 0 chr17 29095033 29095109 -56343371 - MIR SINE MIR -110 152 76 288 275 60 74 chr17 29095794 29095859 -56342621 + MIR SINE MIR 116 180 -82 447 226 57 73 chr17 29095859 29096036 -56342444 + MER104 DNA MER2_type 4 177 -3 288 275 60 74 chr17 29096036 29096119 -56342361 + MIR SINE MIR 180 262 0 406 298 28 28 chr17 29096120 29096298 -56342182 + MIR SINE MIR 74 251 -11 478 327 51 0 chr17 29097367 29097523 -56340957 - MIR SINE MIR -94 168 5 315 342 27 0 chr17 29097682 29097793 -56340687 - MIR SINE MIR -65 143 30 449 312 91 20 chr17 29098050 29098249 -56340231 + MIR SINE MIR 34 246 -16 809 263 168 28 chr17 29099276 29099633 -56338847 + MLT1J2 LTR MaLR 44 450 0 213 306 42 0 chr17 29100019 29100091 -56338389 + L2 LINE L2 2595 2669 -645 291 251 66 109 chr17 29100772 29100955 -56337525 + MIR3 SINE MIR 33 207 -1 541 186 0 0 chr17 29102012 29102098 -56336382 - FRAM SINE Alu -38 138 53 453 266 70 13 chr17 29102315 29102357 -56336123 - MIR3 SINE MIR -1 207 169 464 244 28 40 chr17 29102357 29102533 -56335947 + MER5B DNA MER1_type 1 174 -4 453 266 70 13 chr17 29102533 29102648 -56335832 - MIR3 SINE MIR -39 169 41 213 94 0 0 chr17 29103473 29103505 -56334975 + (TG)n Simple_repeat Simple_repeat 2 33 0 342 289 59 40 chr17 29103596 29103748 -56334732 + MER5A DNA MER1_type 30 184 -5 233 247 86 0 chr17 29103831 29103912 -56334568 + MIR3 SINE MIR 98 185 -23 207 133 0 0 chr17 29104945 29104990 -56333490 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 689 258 46 73 chr17 29105157 29105525 -56332955 + L1ME4a LINE L1 5558 5915 -206 38673 46 1 6 chr17 29105642 29111195 -56327285 - L1PA5 LINE L1 -9 6145 623 728 68 0 0 chr17 29111193 29111281 -56327199 - L1PA5 LINE L1 -6048 98 11 * 249 313 53 15 chr17 29111424 29111555 -56326925 + MIR SINE MIR 13 148 -114 1445 217 11 3 chr17 29111663 29111949 -56326531 - AluJo SINE Alu -24 288 1 542 155 0 10 chr17 29111951 29112054 -56326426 - FLAM_C SINE Alu -4 139 38 201 366 84 0 chr17 29112303 29112445 -56326035 - MIR SINE MIR -63 199 46 315 264 0 22 chr17 29113064 29113155 -56325325 - MIR3 SINE MIR -47 161 73 269 323 21 0 chr17 29113253 29113346 -56325134 - L2 LINE L2 -4 3309 3215 195 207 121 0 chr17 29113766 29113824 -56324656 - L2 LINE L2 -184 3088 3024 379 256 33 0 chr17 29114656 29114746 -56323734 - MER81 DNA DNA -17 97 5 1546 103 42 19 chr17 29114789 29115042 -56323438 + AluSp SINE Alu 64 321 0 6639 230 53 56 chr17 29115092 29116778 -56321702 - L1MEc LINE L1 -2758 3457 1767 337 107 0 173 chr17 29116778 29116816 -56321664 + MADE1 DNA Mariner 2 22 -58 2338 92 3 3 chr17 29116816 29117110 -56321370 - AluSc SINE Alu -15 294 1 337 107 0 173 chr17 29117110 29117146 -56321334 + MADE1 DNA Mariner 22 63 -17 6639 230 53 56 chr17 29117146 29118856 -56319624 - L1MEc LINE L1 -4448 1767 35 2516 70 0 0 chr17 29319837 29320138 -56118342 + AluY SINE Alu 1 301 -10 284 203 165 13 chr17 29320304 29320383 -56118097 + MIR SINE MIR 85 175 -87 1794 166 3 28 chr17 29320732 29321052 -56117428 + AluJb SINE Alu 1 312 0 333 167 0 17 chr17 29321320 29321380 -56117100 - AluSq SINE Alu -114 189 131 1342 239 92 82 chr17 29321390 29322055 -56116425 + L1MC4a LINE L1 5446 6121 -1687 1930 96 44 4 chr17 29322055 29322350 -56116130 - AluSx SINE Alu 0 306 1 1342 239 92 82 chr17 29322350 29322364 -56116116 + L1MC4a LINE L1 6121 6133 -1675 2077 114 59 0 chr17 29322582 29322872 -56115608 - AluSq SINE Alu -6 307 1 497 220 76 8 chr17 29323223 29323341 -56115139 - FRAM SINE Alu -22 154 29 2312 119 0 0 chr17 29323450 29323762 -56114718 + AluSx SINE Alu 1 312 0 309 297 32 0 chr17 29323762 29323903 -56114577 + MIR SINE MIR 38 182 -75 184 295 23 93 chr17 29324096 29324225 -56114255 - MIR SINE MIR -67 195 76 733 162 24 72 chr17 29324392 29324535 -56113945 + L1MB7 LINE L1 6017 6156 -28 1789 157 25 4 chr17 29324535 29324844 -56113636 + AluSx SINE Alu 1 315 0 733 162 24 72 chr17 29324844 29324864 -56113616 + L1MB7 LINE L1 6156 6175 -9 462 249 50 39 chr17 29324993 29325174 -56113306 + L1ME3A LINE L1 5988 6170 0 2539 193 67 33 chr17 29325202 29325385 -56113095 + MLT1E LTR MaLR 1 176 -417 2255 87 7 17 chr17 29325385 29325685 -56112795 + AluSq SINE Alu 1 297 -16 2539 193 67 33 chr17 29325685 29326070 -56112410 + MLT1E LTR MaLR 176 588 -5 2017 180 49 26 chr17 29326081 29326618 -56111862 - MER77 LTR ERV1 -4 601 1 836 136 0 0 chr17 29326647 29326765 -56111715 + FLAM_C SINE Alu 1 118 -25 1875 104 12 0 chr17 29327467 29327717 -56110763 - AluSq SINE Alu -60 253 1 268 289 0 8 chr17 29327765 29327893 -56110587 - L1M4 LINE L1 -832 5314 5188 2094 127 3 7 chr17 29327938 29328237 -56110243 - AluSp SINE Alu -15 298 1 840 192 0 0 chr17 29328245 29328370 -56110110 - FLAM_C SINE Alu -17 126 2 519 226 91 85 chr17 29328375 29328470 -56110010 - AluJo SINE Alu -12 300 207 1456 165 0 4 chr17 29328470 29328707 -56109773 - AluJb SINE Alu -13 299 64 519 226 91 85 chr17 29328707 29328810 -56109670 - AluJo SINE Alu -105 207 101 2120 105 0 38 chr17 29329029 29329374 -56109106 - AluSx SINE Alu 0 312 1 680 195 8 23 chr17 29329379 29329507 -56108973 - FLAM_C SINE Alu -16 127 2 180 0 0 0 chr17 29329806 29329826 -56108654 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1784 142 39 3 chr17 29329826 29330108 -56108372 - AluJb SINE Alu -20 292 1 384 147 0 40 chr17 29330192 29330267 -56108213 - L1MB2 LINE L1 0 6171 6100 1954 133 0 23 chr17 29330268 29330570 -56107910 + AluSx SINE Alu 4 298 -14 756 173 0 24 chr17 29330570 29330697 -56107783 - FLAM_A SINE Alu -8 125 2 1334 161 22 0 chr17 29330697 29330920 -56107560 - L1MB2 LINE L1 -119 6052 5825 2134 95 14 17 chr17 29330925 29331093 -56107387 - AluSx SINE Alu -17 295 127 207 0 0 0 chr17 29331093 29331116 -56107364 + (TG)n Simple_repeat Simple_repeat 2 24 0 2134 95 14 17 chr17 29331116 29331241 -56107239 - AluSx SINE Alu -185 127 3 2272 108 3 0 chr17 29331255 29331552 -56106928 - AluSg SINE Alu -10 300 3 1847 143 7 27 chr17 29332089 29332390 -56106090 - AluSx SINE Alu -17 295 1 937 236 107 18 chr17 29332617 29332943 -56105537 - MER96B DNA MER1_type? -52 365 11 229 266 76 0 chr17 29333258 29333337 -56105143 + L2 LINE L2 1705 1789 -1525 243 291 64 9 chr17 29333386 29333496 -56104984 - L1MC5 LINE L1 -535 7426 7311 * 273 304 10 10 chr17 29333480 29333582 -56104898 - L1MC4 LINE L1 -547 7495 7394 2252 75 4 0 chr17 29333735 29334048 -56104432 - AluSc SINE Alu 0 314 1 759 90 4 225 chr17 29334186 29334274 -56104206 - L1MD3 LINE L1 -2 7993 7887 1612 159 4 4 chr17 29334274 29334531 -56103949 - AluJo SINE Alu -55 257 1 759 90 4 225 chr17 29334531 29334563 -56103917 - L1MD3 LINE L1 -108 7887 7850 2141 136 10 0 chr17 29334563 29334872 -56103608 - AluSx SINE Alu 0 312 1 2220 132 3 0 chr17 29334872 29335183 -56103297 - AluSx SINE Alu 0 312 1 759 90 4 225 chr17 29335183 29335304 -56103176 - L1MD3 LINE L1 -143 7852 7804 1211 101 6 0 chr17 29335362 29335531 -56102949 - L1MB3 LINE L1 0 6183 6014 320 128 0 0 chr17 29335593 29335640 -56102840 + Alu SINE Alu 1 47 -255 180 111 0 0 chr17 29335764 29335791 -56102689 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 324 0 0 0 chr17 29336158 29336194 -56102286 + (TA)n Simple_repeat Simple_repeat 2 37 0 1880 171 0 13 chr17 29336194 29336510 -56101970 - AluSp SINE Alu -1 312 1 22 0 0 0 chr17 29336556 29336578 -56101902 + AT_rich Low_complexity Low_complexity 1 22 0 338 126 6 45 chr17 29336717 29336788 -56101692 + FAM SINE Alu 27 91 -84 290 299 45 73 chr17 29337485 29337662 -56100818 - MIR3 SINE MIR 0 208 37 2156 112 3 0 chr17 29337787 29338081 -56100399 - AluSc SINE Alu -14 295 1 253 229 72 36 chr17 29338932 29339015 -56099465 - MIR SINE MIR -4 258 173 723 289 22 30 chr17 29339043 29339275 -56099205 + MIR SINE MIR 33 262 0 374 248 184 24 chr17 29339289 29339414 -56099066 - MIR SINE MIR -105 157 13 2237 85 16 13 chr17 29339726 29340031 -56098449 + AluSg SINE Alu 1 306 -4 1196 81 0 0 chr17 29340297 29340446 -56098034 + AluSc SINE Alu 3 151 -158 1856 159 3 3 chr17 29340886 29341176 -56097304 - AluSx SINE Alu -22 290 1 2282 171 63 8 chr17 29341425 29341875 -56096605 - MLT1D LTR MaLR 0 505 41 2102 71 0 99 chr17 29343167 29343490 -56094990 + AluSc SINE Alu 1 291 -18 349 233 27 0 chr17 29343658 29343731 -56094749 + MIR SINE MIR 23 97 -165 2360 69 0 30 chr17 29344006 29344311 -56094169 - AluY SINE Alu -15 296 1 955 303 52 26 chr17 29345102 29345488 -56092992 + MLT1J2 LTR MaLR 55 450 0 352 326 23 125 chr17 29345629 29345876 -56092604 + L2 LINE L2 2906 3100 -172 2134 119 0 10 chr17 29345876 29346171 -56092309 - AluSc SINE Alu -17 292 1 352 326 23 125 chr17 29346171 29346316 -56092164 + L2 LINE L2 3100 3258 -14 182 250 23 0 chr17 29346678 29346722 -56091758 + L2 LINE L2 3255 3299 -14 731 58 0 0 chr17 29346929 29347015 -56091465 + AluS SINE Alu 2 87 -226 440 292 7 14 chr17 29347016 29347160 -56091320 - MIR SINE MIR -110 152 10 248 226 48 0 chr17 29347244 29347306 -56091174 - LTR67 LTR ERVL 0 557 493 337 171 0 0 chr17 29347405 29347472 -56091008 + L1MA9 LINE L1 6059 6125 -166 438 20 0 0 chr17 29347488 29347539 -56090941 + (GA)n Simple_repeat Simple_repeat 2 52 0 2277 106 0 0 chr17 29347659 29347960 -56090520 - AluSx SINE Alu -11 301 1 439 230 31 123 chr17 29347967 29348228 -56090252 - LTR67 LTR ERVL -318 239 3 300 200 0 0 chr17 29349059 29349114 -56089366 + MER5B DNA MER1_type 1 55 -123 225 119 0 0 chr17 29349598 29349640 -56088840 + (CA)n Simple_repeat Simple_repeat 2 43 0 2348 80 10 0 chr17 29349719 29350021 -56088459 - AluSq SINE Alu -8 305 1 1993 114 24 0 chr17 29350737 29351026 -56087454 - AluY SINE Alu -15 296 1 4093 113 7 42 chr17 29351321 29352271 -56086209 - L1PB4 LINE L1 0 6156 5254 1895 151 0 27 chr17 29352302 29352601 -56085879 - AluJb SINE Alu -21 291 1 29 28 0 0 chr17 29352601 29352637 -56085843 + AT_rich Low_complexity Low_complexity 1 36 0 2304 140 9 6 chr17 29353748 29354084 -56084396 - MER1B DNA MER1_type 0 337 1 1082 197 38 50 chr17 29354218 29354457 -56084023 + MIR SINE MIR 8 243 -19 191 35 0 35 chr17 29354499 29354528 -56083952 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1475 236 89 114 chr17 29355531 29355755 -56082725 - HAL1 LINE L1 0 2507 2279 2221 124 0 0 chr17 29355755 29356054 -56082426 - AluSx SINE Alu -13 299 1 1475 236 89 114 chr17 29356054 29356131 -56082349 - HAL1 LINE L1 -228 2279 2202 1606 174 7 44 chr17 29356131 29356424 -56082056 - AluJo SINE Alu -30 282 1 1475 236 89 114 chr17 29356424 29357130 -56081350 - HAL1 LINE L1 -305 2202 1524 501 145 0 103 chr17 29357137 29357254 -56081226 - Charlie5 DNA MER1_type -29 2583 2479 675 168 9 0 chr17 29357255 29357362 -56081118 + FLAM_A SINE Alu 2 109 -33 522 181 51 134 chr17 29357422 29357676 -56080804 - MER33 DNA MER1_type -249 75 1 604 179 26 22 chr17 29357745 29357882 -56080598 - L1M4 LINE L1 -676 5475 5357 497 246 8 31 chr17 29358766 29358896 -56079584 - MLT1K LTR MaLR -15 573 447 2314 78 0 32 chr17 29359408 29359717 -56078763 - AluY SINE Alu -12 299 1 28 79 0 0 chr17 29359853 29359916 -56078564 + AT_rich Low_complexity Low_complexity 1 63 0 264 59 0 0 chr17 29360238 29360272 -56078208 + (TG)n Simple_repeat Simple_repeat 1 34 0 234 146 0 42 chr17 29360275 29360323 -56078157 + L1MC4 LINE L1 6658 6703 -1339 222 264 138 23 chr17 29361427 29361514 -56076966 - L2 LINE L2 -8 3305 3209 199 143 184 0 chr17 29361771 29361820 -56076660 - L2 LINE L2 -8 3305 3248 240 308 162 0 chr17 29361965 29362082 -56076398 - MIR SINE MIR -79 183 48 381 250 191 18 chr17 29362160 29362328 -56076152 - MIR SINE MIR 0 262 66 2276 105 3 10 chr17 29363224 29363538 -56074942 + AluSq SINE Alu 2 313 0 3398 107 97 16 chr17 29363744 29364231 -56074249 - MER1A DNA MER1_type 0 527 2 2200 114 3 0 chr17 29364485 29364775 -56073705 + AluSp SINE Alu 1 291 -22 180 111 0 0 chr17 29364848 29364875 -56073605 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 5463 81 33 11 chr17 29364928 29365721 -56072759 - SVA Other Other -520 866 57 297 0 0 0 chr17 29365721 29365754 -56072726 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 5384 139 43 9 chr17 29365776 29367076 -56071404 - L1M1 LINE L1 -5272 2293 11 484 164 11 8 chr17 29367118 29367212 -56071268 - L1MB3 LINE L1 -47 6136 6049 2590 150 47 7 chr17 29367240 29367687 -56070793 - L1MB2 LINE L1 -110 6061 5597 710 115 10 0 chr17 29367721 29367825 -56070655 - AluSg/x SINE Alu -7 305 201 1753 105 0 0 chr17 29367925 29368173 -56070307 - AluSq SINE Alu -11 302 55 2065 112 7 0 chr17 29369817 29370111 -56068369 - AluSx SINE Alu -16 296 1 24 0 0 0 chr17 29370162 29370186 -56068294 + AT_rich Low_complexity Low_complexity 1 24 0 324 266 63 0 chr17 29370197 29370276 -56068204 + L1MC4 LINE L1 6619 6702 -1340 1028 130 57 0 chr17 29370276 29370453 -56068027 - AluSq SINE Alu -7 306 120 28 29 0 0 chr17 29370626 29370661 -56067819 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 29371075 29371096 -56067384 + AT_rich Low_complexity Low_complexity 1 21 0 529 230 61 70 chr17 29371357 29371493 -56066987 + MER2 DNA MER2_type 1 136 -209 1307 185 141 22 chr17 29371493 29371763 -56066717 - AluJo SINE Alu 0 302 1 529 230 61 70 chr17 29371763 29371839 -56066641 + MER2 DNA MER2_type 136 211 -134 2028 35 4 23 chr17 29372043 29372302 -56066178 + SVA Other Other 1133 1386 0 974 172 91 10 chr17 29372340 29372549 -56065931 + AluJo SINE Alu 82 307 -5 702 265 53 71 chr17 29372568 29373017 -56065463 + L1M4 LINE L1 4177 4617 -1529 778 164 0 0 chr17 29373028 29373144 -56065336 - AluJb SINE Alu -25 287 172 2057 120 10 0 chr17 29373222 29373531 -56064949 - AluSx SINE Alu 0 312 1 687 85 0 21 chr17 29374072 29374166 -56064314 + AluS SINE Alu 2 93 -219 1573 115 58 0 chr17 29374171 29374414 -56064066 - AluSq SINE Alu -56 257 1 917 124 13 20 chr17 29374536 29374689 -56063791 - AluSx SINE Alu -159 153 2 196 374 0 12 chr17 29374782 29374865 -56063615 + MIR SINE MIR 92 173 -89 1053 208 33 0 chr17 29375279 29375491 -56062989 - MER20 DNA MER1_type 0 219 1 562 240 23 8 chr17 29376480 29376609 -56061871 + MER5A DNA MER1_type 37 167 -22 230 333 82 34 chr17 29376964 29377111 -56061369 + L2 LINE L2 3160 3313 0 2062 102 0 0 chr17 29377115 29377439 -56061041 + AluY SINE Alu 1 324 0 185 255 59 0 chr17 29377634 29377685 -56060795 + MER5C DNA MER1_type 87 140 -184 781 219 59 16 chr17 29378097 29378284 -56060196 - MER58C DNA MER1_type -10 205 11 279 297 0 68 chr17 29378462 29378580 -56059900 - MIR3 SINE MIR -3 205 96 705 208 0 0 chr17 29378839 29379067 -56059413 + (CA)n Simple_repeat Simple_repeat 1 228 0 276 30 0 0 chr17 29379332 29379365 -56059115 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 683 183 9 0 chr17 29379367 29379482 -56058998 - FLAM_C SINE Alu -17 116 1 258 242 121 81 chr17 29379482 29379631 -56058849 - L1ME3 LINE L1 -47 6115 5961 1943 145 0 0 chr17 29379662 29379959 -56058521 + AluSq SINE Alu 1 297 -16 1403 119 0 0 chr17 29379959 29380153 -56058327 - AluSq SINE Alu -114 199 6 344 288 213 57 chr17 29380304 29380867 -56057613 + L1MC4a LINE L1 5284 5934 -1874 312 286 37 74 chr17 29380901 29381054 -56057426 + L1ME4a LINE L1 5939 6085 -36 1699 177 3 13 chr17 29381054 29381364 -56057116 + AluJb SINE Alu 1 307 -5 312 286 37 74 chr17 29381364 29381399 -56057081 + L1ME4a LINE L1 6085 6120 -1 194 91 30 0 chr17 29382272 29382305 -56056175 + A-rich Low_complexity Low_complexity 5 38 0 882 222 102 0 chr17 29382669 29382894 -56055586 - MIR SINE MIR -2 260 13 1974 87 50 43 chr17 29382951 29383251 -56055229 + AluSp SINE Alu 1 302 -11 1318 142 5 0 chr17 29387585 29387789 -56050691 - AluJo SINE Alu -107 205 1 1213 181 9 22 chr17 29387794 29388021 -56050459 + MLT1F1 LTR MaLR 344 567 0 510 277 47 0 chr17 29388042 29388190 -56050290 - L3 LINE CR1 -187 1390 1236 348 302 131 48 chr17 29388196 29388487 -56049993 - L2 LINE L2 -5 3267 2953 497 346 87 11 chr17 29388522 29388877 -56049603 - L3 LINE CR1 -354 1223 842 500 318 109 14 chr17 29389520 29389731 -56048749 - L2 LINE L2 -1 3271 3041 476 261 19 50 chr17 29389759 29389920 -56048560 - MIR SINE MIR 0 262 107 1608 178 7 3 chr17 29389930 29390222 -56048258 + AluJb SINE Alu 5 297 -15 1841 143 7 0 chr17 29390224 29390511 -56047969 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr17 29390518 29390540 -56047940 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 340 198 43 58 chr17 29390629 29390723 -56047757 + MER91B DNA MER1_type 1 91 -49 306 314 29 0 chr17 29390861 29390963 -56047517 - LTR67 LTR ERVL -51 506 402 693 288 89 8 chr17 29391343 29391579 -56046901 - MIR SINE MIR 0 262 8 207 146 0 0 chr17 29392339 29392380 -56046100 + (A)n Simple_repeat Simple_repeat 1 41 0 193 29 59 0 chr17 29392628 29392662 -56045818 + (TA)n Simple_repeat Simple_repeat 1 36 0 1603 160 25 0 chr17 29392663 29392945 -56045535 - AluJo SINE Alu -23 289 1 262 313 83 10 chr17 29393185 29393281 -56045199 + MIR SINE MIR 48 150 -58 563 232 36 7 chr17 29393730 29393868 -56044612 - MIR SINE MIR -86 176 35 2185 110 3 0 chr17 29394245 29394553 -56043927 - AluSx SINE Alu -3 309 1 324 0 0 0 chr17 29394756 29394792 -56043688 + (T)n Simple_repeat Simple_repeat 1 36 0 322 51 0 0 chr17 29394792 29394831 -56043649 - MER57B LTR ERV1 -66 368 330 490 269 139 66 chr17 29394893 29395265 -56043215 + LTR16A1 LTR ERVL 74 452 -5 436 323 0 12 chr17 29395608 29395772 -56042708 + (CA)n Simple_repeat Simple_repeat 2 163 0 1917 145 0 0 chr17 29396166 29396484 -56041996 - AluSx SINE Alu 0 318 1 322 341 61 8 chr17 29396880 29397012 -56041468 - MIR SINE MIR -29 233 95 1837 117 4 4 chr17 29397114 29397387 -56041093 + AluSp SINE Alu 37 309 -4 811 266 42 21 chr17 29397565 29397806 -56040674 - MIR SINE MIR -1 261 16 255 294 37 37 chr17 29398184 29398320 -56040160 + LTR67 LTR ERVL 410 545 -12 1885 146 0 0 chr17 29398747 29399034 -56039446 + AluSx SINE Alu 24 310 -2 1354 145 45 55 chr17 29399890 29400179 -56038301 + AluJb SINE Alu 12 297 -15 2079 149 79 28 chr17 29400207 29400635 -56037845 - L1MB8 LINE L1 -6 6172 5723 2716 171 21 58 chr17 29400737 29400819 -56037661 - L1MB8 LINE L1 -743 5403 5320 2159 92 0 0 chr17 29400819 29401122 -56037358 - AluSx SINE Alu 0 303 1 1784 147 7 3 chr17 29401132 29401417 -56037063 - AluSx SINE Alu -26 286 1 2716 171 21 58 chr17 29401417 29401939 -56036541 - L1MB8 LINE L1 -835 5311 4810 1971 142 0 3 chr17 29401939 29402250 -56036230 - AluSx SINE Alu -2 310 1 2716 171 21 58 chr17 29402250 29402289 -56036191 - L1MB8 LINE L1 -1336 4810 4771 2377 82 0 0 chr17 29402297 29402603 -56035877 - AluY SINE Alu -5 306 1 545 310 7 0 chr17 29402779 29402924 -56035556 + Charlie7 DNA MER1_type 228 373 -2239 * 1291 205 91 86 chr17 29402920 29403177 -56035303 + Charlie7 DNA MER1_type 1644 1898 -714 2148 97 6 6 chr17 29403177 29403488 -56034992 + AluY SINE Alu 1 311 0 1291 205 91 86 chr17 29403488 29403721 -56034759 + Charlie7 DNA MER1_type 1898 2140 -472 2075 104 0 16 chr17 29403721 29404029 -56034451 + AluSx SINE Alu 1 303 -9 1291 205 91 86 chr17 29404029 29404122 -56034358 + Charlie7 DNA MER1_type 2140 2231 -381 905 181 0 0 chr17 29404129 29404312 -56034168 + AluSg/x SINE Alu 130 312 0 2208 100 0 3 chr17 29404369 29404668 -56033812 + AluSx SINE Alu 1 298 -14 1079 124 6 0 chr17 29404668 29404829 -56033651 + AluSg/x SINE Alu 134 295 -17 34 65 0 0 chr17 29404870 29404932 -56033548 + AT_rich Low_complexity Low_complexity 1 62 0 24 67 0 0 chr17 29404980 29405025 -56033455 + AT_rich Low_complexity Low_complexity 1 45 0 26 0 0 0 chr17 29405089 29405115 -56033365 + AT_rich Low_complexity Low_complexity 1 26 0 638 292 42 25 chr17 29405293 29405529 -56032951 + MIR SINE MIR 9 248 -14 2162 115 3 0 chr17 29406008 29406312 -56032168 + AluSq SINE Alu 1 305 -8 1716 179 17 0 chr17 29406385 29406681 -56031799 + AluSx SINE Alu 10 310 -2 550 236 36 30 chr17 29407075 29407240 -56031240 - MLT1J LTR MaLR -4 507 342 292 274 14 0 chr17 29407332 29407405 -56031075 - ERVL LTR ERVL -1490 4274 4201 614 231 13 64 chr17 29407465 29407621 -56030859 - ERVL LTR ERVL -2739 2257 2110 485 194 117 0 chr17 29407650 29407753 -56030727 - ERVL LTR ERVL -3194 1802 1688 791 293 95 11 chr17 29407782 29408065 -56030415 - ERVL LTR ERVL -3442 1554 1248 2529 288 55 39 chr17 29408103 29408406 -56030074 - ERVL LTR ERVL -3824 1172 875 2162 75 3 20 chr17 29408406 29408700 -56029780 - AluY SINE Alu -22 289 1 2529 288 55 39 chr17 29408700 29409500 -56028980 - ERVL LTR ERVL -4121 875 51 1653 176 3 0 chr17 29409536 29409825 -56028655 - AluJb SINE Alu -22 290 1 541 244 166 28 chr17 29409843 29410135 -56028345 - LTR16A LTR ERVL -72 378 34 1573 145 17 54 chr17 29410226 29410558 -56027922 - AluJb SINE Alu 0 321 1 968 262 44 0 chr17 29410766 29410991 -56027489 + Charlie8 DNA MER1_type 10 244 -2173 1813 122 7 43 chr17 29411073 29411376 -56027104 - AluSx SINE Alu -20 292 1 1766 159 3 16 chr17 29411463 29411771 -56026709 - AluJb SINE Alu -8 304 1 1504 157 17 34 chr17 29412693 29412987 -56025493 + AluJo SINE Alu 7 295 -17 2304 81 3 0 chr17 29413042 29413340 -56025140 + AluSg SINE Alu 1 299 -11 241 333 30 0 chr17 29413513 29413579 -56024901 + MIR SINE MIR 35 102 -160 287 336 0 0 chr17 29414541 29414654 -56023826 + C-rich Low_complexity Low_complexity 1 113 0 201 302 21 10 chr17 29414685 29414781 -56023699 + C-rich Low_complexity Low_complexity 5 101 0 246 62 0 0 chr17 29414961 29414993 -56023487 + (GGGAA)n Simple_repeat Simple_repeat 2 33 0 34 55 0 0 chr17 29416535 29416590 -56021890 + AT_rich Low_complexity Low_complexity 1 55 0 2541 72 0 3 chr17 29416660 29416964 -56021516 + AluSx SINE Alu 1 303 -9 218 396 51 9 chr17 29417412 29417629 -56020851 - L2 LINE L2 -237 3035 2810 276 331 52 26 chr17 29417664 29417818 -56020662 - MIR3 SINE MIR 0 208 51 2280 99 3 7 chr17 29418265 29418567 -56019913 + AluSc SINE Alu 1 301 -8 26 30 0 0 chr17 29418567 29418600 -56019880 + AT_rich Low_complexity Low_complexity 1 33 0 259 122 0 0 chr17 29418624 29418665 -56019815 + U6 snRNA snRNA 1 41 -66 21 36 0 0 chr17 29419098 29419126 -56019354 + AT_rich Low_complexity Low_complexity 1 28 0 2399 83 0 3 chr17 29419273 29419574 -56018906 + AluSq SINE Alu 1 300 -13 2560 47 3 0 chr17 29420606 29420902 -56017578 - AluY SINE Alu -14 297 1 265 238 119 27 chr17 29421059 29421163 -56017317 + HAL1b LINE L1 910 1003 -345 2620 47 3 0 chr17 29421163 29421461 -56017019 + AluSp SINE Alu 1 299 -14 265 238 119 27 chr17 29421461 29421541 -56016939 + HAL1b LINE L1 1003 1111 -237 2289 73 17 0 chr17 29422999 29423286 -56015194 - AluSx SINE Alu -20 292 1 1826 134 34 14 chr17 29423499 29423791 -56014689 + AluJb SINE Alu 1 298 -14 1712 185 127 33 chr17 29423936 29424051 -56014429 + MLT1C LTR MaLR 1 104 -363 2483 65 3 3 chr17 29424051 29424361 -56014119 + AluY SINE Alu 1 310 -1 1712 185 127 33 chr17 29424361 29424672 -56013808 + MLT1C LTR MaLR 104 467 0 581 249 104 0 chr17 29424734 29424907 -56013573 + MIR SINE MIR 66 256 -6 1733 187 0 16 chr17 29425279 29425584 -56012896 + AluJb SINE Alu 1 300 -12 372 314 64 28 chr17 29425696 29425979 -56012501 - L2 LINE L2 -978 2336 2044 2397 92 3 0 chr17 29425984 29426289 -56012191 + AluSq SINE Alu 1 306 -7 706 235 36 0 chr17 29426329 29426495 -56011985 + L1ME3A LINE L1 5518 5689 -481 300 239 0 0 chr17 29426512 29426579 -56011901 + MER116 DNA Mariner 14 80 0 258 159 0 0 chr17 29426580 29426624 -56011856 + L1ME3A LINE L1 5688 5731 -439 881 204 159 29 chr17 29426649 29426742 -56011738 + L1ME3A LINE L1 5819 5899 -271 2018 114 10 23 chr17 29426742 29427041 -56011439 + AluSq SINE Alu 1 295 -18 881 204 159 29 chr17 29427041 29427255 -56011225 + L1ME3A LINE L1 5899 6166 -4 1641 170 3 66 chr17 29427277 29427419 -56011061 + AluJo SINE Alu 5 154 -158 2508 75 0 3 chr17 29427419 29427727 -56010753 + AluY SINE Alu 1 307 -4 1641 170 3 66 chr17 29427727 29427801 -56010679 + AluJo SINE Alu 154 197 -115 2568 53 0 0 chr17 29427801 29428102 -56010378 - AluY SINE Alu -10 301 1 1641 170 3 66 chr17 29428102 29428202 -56010278 + AluJo SINE Alu 197 302 -10 2143 145 3 0 chr17 29428211 29428522 -56009958 + AluSx SINE Alu 1 312 0 2300 88 0 7 chr17 29429080 29429375 -56009105 - AluSg SINE Alu -17 293 1 2346 114 0 0 chr17 29429429 29429736 -56008744 + AluSx SINE Alu 1 307 -5 828 173 0 0 chr17 29429862 29429989 -56008491 - AluJb SINE Alu -185 127 1 1291 131 14 102 chr17 29430336 29430454 -56008026 - L1MB5 LINE L1 -1 6173 6046 2276 104 10 0 chr17 29430454 29430752 -56007728 - AluSx SINE Alu -11 301 1 1291 131 14 102 chr17 29430752 29430916 -56007564 - L1MB5 LINE L1 -128 6046 5916 1969 150 11 0 chr17 29431125 29431411 -56007069 - AluSx SINE Alu -23 289 1 1157 241 79 48 chr17 29431583 29431977 -56006503 + L2 LINE L2 2906 3311 -2 466 235 163 6 chr17 29432229 29432395 -56006085 - L2 LINE L2 -1 3312 3121 1865 106 0 44 chr17 29432400 29432674 -56005806 - AluSx SINE Alu -2 310 49 2006 138 7 0 chr17 29432677 29432959 -56005521 + AluSx SINE Alu 16 299 -13 233 136 212 0 chr17 29432967 29433033 -56005447 + MER116 DNA Mariner 1 80 0 631 219 92 88 chr17 29433034 29433285 -56005195 + MIR SINE MIR 11 262 0 2321 118 0 0 chr17 29433379 29433685 -56004795 - AluSx SINE Alu -6 306 1 1338 178 0 0 chr17 29434126 29434339 -56004141 - AluJb SINE Alu -15 297 85 256 133 0 0 chr17 29434345 29434390 -56004090 + L1MB4 LINE L1 6029 6073 -107 511 179 72 0 chr17 29434399 29434561 -56003919 + L1MA9 LINE L1 6021 6290 -22 360 107 23 199 chr17 29434574 29434663 -56003817 + L1MB4 LINE L1 6067 6127 -53 1668 181 0 27 chr17 29434663 29434961 -56003519 + AluJo SINE Alu 5 294 -18 360 107 23 199 chr17 29434961 29435002 -56003478 + L1MB4 LINE L1 6127 6174 -6 261 57 0 0 chr17 29435019 29435054 -56003426 + (T)n Simple_repeat Simple_repeat 1 35 0 381 268 89 30 chr17 29435148 29435365 -56003115 + MIR SINE MIR 28 262 0 369 162 0 0 chr17 29435385 29435453 -56003027 + A-rich Low_complexity Low_complexity 1 68 0 2641 55 0 6 chr17 29435654 29435966 -56002514 - AluY SINE Alu -1 310 1 384 300 22 56 chr17 29436592 29436772 -56001708 - MIR SINE MIR -85 177 4 188 225 28 28 chr17 29437425 29437496 -56000984 - L2 LINE L2 -181 3091 3021 496 295 10 50 chr17 29437541 29437741 -56000739 - MIR SINE MIR -51 211 20 270 205 26 26 chr17 29439059 29439137 -55999343 - MIR SINE MIR -118 144 67 2203 101 3 23 chr17 29439185 29439491 -55998989 - AluSx SINE Alu -12 300 1 265 208 0 65 chr17 29439495 29439572 -55998908 + MIR SINE MIR 66 137 -125 2378 90 3 13 chr17 29439614 29439924 -55998556 - AluSq SINE Alu -6 307 1 1956 154 7 0 chr17 29440014 29440306 -55998174 + AluJb SINE Alu 4 297 -15 334 138 0 250 chr17 29440548 29440708 -55997772 - L2 LINE L2 -17 3255 3136 2358 93 3 37 chr17 29440780 29441103 -55997377 - AluSq SINE Alu 0 313 2 2355 82 0 16 chr17 29441104 29441407 -55997073 - AluSx SINE Alu -10 302 5 396 69 0 42 chr17 29441425 29441497 -55996983 + (TTC)n Simple_repeat Simple_repeat 2 70 0 1247 135 0 35 chr17 29441500 29441683 -55996797 - AluSg/x SINE Alu 0 312 135 1648 134 112 7 chr17 29441683 29441952 -55996528 - AluSx SINE Alu -15 297 1 1247 135 0 35 chr17 29441952 29441968 -55996512 - AluSg/x SINE Alu -177 135 120 188 266 31 31 chr17 29441979 29442043 -55996437 - MIR SINE MIR -168 94 31 669 221 43 0 chr17 29442355 29442495 -55995985 + MIR SINE MIR 9 154 -108 323 222 148 62 chr17 29442984 29443146 -55995334 + MIR3 SINE MIR 18 193 -15 2347 84 3 10 chr17 29443252 29443563 -55994917 + AluY SINE Alu 1 309 -2 1521 187 30 40 chr17 29443658 29443958 -55994522 + AluJo SINE Alu 1 297 -15 1133 127 18 0 chr17 29443968 29444134 -55994346 + AluSg/x SINE Alu 135 303 -7 2140 116 25 0 chr17 29444134 29444419 -55994061 + AluSx SINE Alu 1 292 -20 445 280 53 8 chr17 29444424 29444556 -55993924 - MIR SINE MIR -7 255 118 428 341 133 0 chr17 29444779 29444952 -55993528 - MER91A DNA MER1_type 0 196 1 450 373 18 14 chr17 29444998 29445215 -55993265 + MIR SINE MIR 13 230 -32 1927 146 0 70 chr17 29445607 29445937 -55992543 - AluJb SINE Alu -5 307 1 556 219 91 106 chr17 29445938 29445966 -55992514 - MLT1K LTR MaLR -11 577 550 2194 120 0 0 chr17 29445966 29446292 -55992188 - AluSx SINE Alu 0 326 1 556 219 91 106 chr17 29446292 29446659 -55991821 - MLT1K LTR MaLR -38 550 187 476 306 124 26 chr17 29446789 29446982 -55991498 - MIR SINE MIR -17 245 34 1156 174 13 65 chr17 29447161 29447391 -55991089 + MER20 DNA MER1_type 1 218 -1 1907 122 3 31 chr17 29447483 29447770 -55990710 + AluJo SINE Alu 25 303 -9 2140 118 0 65 chr17 29448151 29448474 -55990006 - AluJb SINE Alu -10 302 1 2240 106 33 0 chr17 29448486 29448787 -55989693 - AluSq SINE Alu -1 312 2 314 305 153 0 chr17 29448836 29448954 -55989526 - MER91A DNA MER1_type -36 160 25 1922 170 0 0 chr17 29449096 29449408 -55989072 - AluSx SINE Alu 0 312 1 2309 75 0 0 chr17 29449440 29449718 -55988762 - AluSg SINE Alu -32 278 1 1132 224 47 83 chr17 29450470 29450669 -55987811 - L2 LINE L2 0 3313 3108 1923 151 0 66 chr17 29450669 29451001 -55987479 + AluJb SINE Alu 1 310 -2 2424 93 0 3 chr17 29451007 29451308 -55987172 + AluSp SINE Alu 3 302 -11 1132 224 47 83 chr17 29451308 29451508 -55986972 - L2 LINE L2 -210 3103 2922 258 360 143 6 chr17 29451516 29451677 -55986803 - MER91A DNA MER1_type -13 183 1 * 407 255 137 25 chr17 29451677 29451818 -55986662 - L2 LINE L2 -383 2931 2773 973 198 72 13 chr17 29451818 29452055 -55986425 - L1MB8 LINE L1 0 6178 5928 1577 216 3 28 chr17 29452063 29452383 -55986097 - AluJo SINE Alu 0 312 1 1001 123 0 6 chr17 29452385 29452556 -55985924 - L1M4 LINE L1 -696 5488 5319 804 70 0 0 chr17 29452556 29452656 -55985824 + AluY SINE Alu 1 100 -211 547 143 9 0 chr17 29452656 29452768 -55985712 - L1M4 LINE L1 -812 5334 5222 1731 211 93 96 chr17 29452773 29452865 -55985615 - L2 LINE L2 -534 2780 2689 2217 96 7 0 chr17 29452865 29453145 -55985335 - AluSg1 SINE Alu -27 282 1 2248 128 0 0 chr17 29453147 29453443 -55985037 - AluSx SINE Alu -16 296 1 1731 211 93 96 chr17 29453443 29453995 -55984485 - L2 LINE L2 -626 2688 2135 773 231 143 26 chr17 29453995 29454477 -55984003 - MLT1H1 LTR MaLR 0 555 1 342 304 11 0 chr17 29454478 29454570 -55983910 - L2 LINE L2 -1176 2138 2046 557 183 21 5 chr17 29454653 29454902 -55983578 + L1MA4A LINE L1 5963 6283 -20 187 167 0 28 chr17 29455200 29455236 -55983244 + L3 LINE CR1 1387 1421 -156 8584 104 5 18 chr17 29455392 29455411 -55983069 - HSMAR2 DNA Mariner -7 1295 1277 2355 90 0 0 chr17 29455411 29455711 -55982769 + AluY SINE Alu 1 300 -11 8584 104 5 18 chr17 29455711 29455868 -55982612 - HSMAR2 DNA Mariner -25 1277 1119 1903 177 0 13 chr17 29455868 29456184 -55982296 - AluJb SINE Alu 0 312 1 8584 104 5 18 chr17 29456184 29456231 -55982249 - HSMAR2 DNA Mariner -183 1119 1073 2363 92 0 0 chr17 29456231 29456526 -55981954 - AluSx SINE Alu -17 295 1 8584 104 5 18 chr17 29456526 29457612 -55980868 - HSMAR2 DNA Mariner -229 1073 1 858 201 42 57 chr17 29457620 29457833 -55980647 + L1ME1 LINE L1 5902 6112 -54 2294 99 0 0 chr17 29457833 29458125 -55980355 - AluSc SINE Alu -17 292 1 858 201 42 57 chr17 29458125 29458175 -55980305 + L1ME1 LINE L1 6112 6161 -5 662 291 48 82 chr17 29458183 29458596 -55979884 + L1MC/D LINE L1 5414 5812 -1996 3885 105 30 55 chr17 29458610 29459005 -55979475 + L1PA15 LINE L1 5275 5678 -487 2412 99 3 0 chr17 29459005 29459317 -55979163 + AluSp SINE Alu 1 313 0 3885 105 30 55 chr17 29459317 29459488 -55978992 + L1PA15 LINE L1 5678 5852 -313 2104 131 0 0 chr17 29459488 29459812 -55978668 + AluSg SINE Alu 1 324 0 2298 86 30 3 chr17 29459822 29460125 -55978355 + AluSq SINE Alu 1 311 -2 3885 105 30 55 chr17 29460125 29460268 -55978212 + L1PA15 LINE L1 5861 5974 -191 1097 121 0 7 chr17 29460268 29460417 -55978063 + AluSq/x SINE Alu 1 148 -165 2006 113 0 0 chr17 29460417 29460673 -55977807 - AluSq SINE Alu -57 256 1 389 290 55 44 chr17 29461328 29461383 -55977097 + MER5A DNA MER1_type 4 57 -132 1933 145 3 29 chr17 29461383 29461716 -55976764 + AluJb SINE Alu 1 312 0 389 290 55 44 chr17 29461716 29461785 -55976695 + MER5A DNA MER1_type 57 133 -56 2516 62 0 7 chr17 29461785 29462092 -55976388 + AluY SINE Alu 1 305 -6 389 290 55 44 chr17 29462092 29462149 -55976331 + MER5A DNA MER1_type 133 188 -1 2025 113 57 7 chr17 29462150 29462432 -55976048 - AluSx SINE Alu -16 296 1 214 175 25 0 chr17 29462672 29462712 -55975768 - MIR SINE MIR -138 124 84 2341 100 3 0 chr17 29463276 29463566 -55974914 - AluSx SINE Alu -21 291 1 2019 87 54 37 chr17 29464210 29464508 -55973972 + AluY SINE Alu 1 303 -8 566 224 168 12 chr17 29464765 29464926 -55973554 + MER5A DNA MER1_type 4 189 0 2634 58 0 3 chr17 29465381 29465693 -55972787 + AluY SINE Alu 1 311 0 520 280 25 6 chr17 29466278 29466435 -55972045 + MIR3 SINE MIR 37 196 -12 265 203 18 3 chr17 29467085 29467151 -55971329 - MIR SINE MIR -71 137 84 237 356 0 0 chr17 29467146 29467219 -55971261 + MIR SINE MIR 150 222 -40 * 952 131 0 7 chr17 29467413 29467550 -55970930 - FLAM_C SINE Alu -7 136 1 2611 61 0 0 chr17 29467559 29467869 -55970611 - AluY SINE Alu -1 310 1 516 340 43 5 chr17 29468086 29468274 -55970206 - MIR3 SINE MIR -12 196 2 2204 129 0 0 chr17 29468277 29468590 -55969890 - AluSx SINE Alu 0 312 1 481 274 63 63 chr17 29468688 29468911 -55969569 + MIR SINE MIR 7 229 -33 1514 86 43 56 chr17 29469369 29469449 -55969031 - MER30 DNA MER1_type 0 230 150 2402 93 0 10 chr17 29469449 29469751 -55968729 - AluSx SINE Alu -13 299 1 1514 86 43 56 chr17 29469751 29469903 -55968577 - MER30 DNA MER1_type -80 150 1 811 289 28 32 chr17 29470771 29471024 -55967456 + MIR SINE MIR 9 260 -2 1673 149 3 106 chr17 29471025 29471210 -55967270 - AluJo SINE Alu -3 299 161 1848 161 0 27 chr17 29471210 29471340 -55967140 + AluJb SINE Alu 1 133 -179 2187 112 20 3 chr17 29471340 29471645 -55966835 + AluSg SINE Alu 1 310 0 1848 161 0 27 chr17 29471645 29471813 -55966667 + AluJb SINE Alu 133 291 -21 1673 149 3 106 chr17 29471813 29471956 -55966524 - AluJo SINE Alu -141 161 5 2177 127 0 16 chr17 29473329 29473645 -55964835 - AluJb SINE Alu -1 311 1 483 186 41 31 chr17 29474086 29474253 -55964227 + L1MC4 LINE L1 7347 7587 -302 457 147 0 0 chr17 29474274 29474342 -55964138 + AluS SINE Alu 229 296 -13 1735 176 21 0 chr17 29474526 29474816 -55963664 + AluJb SINE Alu 1 296 -16 262 305 49 0 chr17 29475051 29475133 -55963347 - L2 LINE L2 -46 3267 3182 376 278 104 0 chr17 29475361 29475476 -55963004 - L2 LINE L2 -220 3052 2926 1853 150 37 7 chr17 29475482 29475776 -55962704 + 7SLRNA srpRNA srpRNA 10 312 -8 712 163 207 0 chr17 29475787 29475922 -55962558 + FRAM SINE Alu 4 166 0 308 93 53 107 chr17 29475951 29476026 -55962454 - MLT2B1 LTR ERVL 0 520 450 2586 78 0 0 chr17 29476026 29476335 -55962145 + AluSc SINE Alu 1 309 0 811 196 54 0 chr17 29476336 29476484 -55961996 + AluJo/FRAM SINE Alu 136 291 -21 789 224 56 32 chr17 29476505 29476615 -55961865 - L1ME1 LINE L1 -150 6016 5910 2408 64 0 0 chr17 29476615 29476953 -55961527 - AluY SINE Alu 0 338 1 789 224 56 32 chr17 29476953 29477091 -55961389 - L1ME1 LINE L1 -256 5910 5761 317 213 0 0 chr17 29477081 29477142 -55961338 + L1ME LINE L1 5784 5844 -320 * 1016 175 0 6 chr17 29477172 29477355 -55961125 + LTR43 LTR ERV1 1 182 -420 2193 122 0 3 chr17 29477383 29477678 -55960802 - AluSx SINE Alu -18 294 1 2932 101 11 39 chr17 29477680 29478051 -55960429 + LTR43 LTR ERV1 150 530 -72 2155 125 0 3 chr17 29478051 29478346 -55960134 - AluSc SINE Alu -15 294 1 2932 101 11 39 chr17 29478346 29478384 -55960096 + LTR43 LTR ERV1 530 547 -55 2341 85 3 0 chr17 29478384 29478678 -55959802 - AluY SINE Alu -16 295 1 2932 101 11 39 chr17 29478678 29478733 -55959747 + LTR43 LTR ERV1 547 602 0 1187 183 61 80 chr17 29478739 29479012 -55959468 - L1ME1 LINE L1 -629 5613 5336 959 217 0 0 chr17 29479012 29479187 -55959293 - FAM SINE Alu 0 175 1 1187 183 61 80 chr17 29479187 29479215 -55959265 - L1ME1 LINE L1 -906 5336 5309 2317 66 35 7 chr17 29479215 29479501 -55958979 + AluY SINE Alu 1 294 -17 1187 183 61 80 chr17 29479501 29479628 -55958852 - L1ME1 LINE L1 -933 5309 5179 730 158 24 31 chr17 29479748 29479875 -55958605 + FLAM_C SINE Alu 1 126 -7 261 275 158 0 chr17 29479886 29480006 -55958474 + Charlie2 DNA MER1_type 439 577 -2285 2497 84 0 6 chr17 29480020 29480331 -55958149 + AluSx SINE Alu 1 309 -3 1031 165 0 0 chr17 29480372 29480536 -55957944 + AluSg/x SINE Alu 135 298 -12 2235 121 3 0 chr17 29480593 29480898 -55957582 - AluSx SINE Alu -6 306 1 1750 173 48 0 chr17 29480983 29481278 -55957202 + AluJb SINE Alu 1 309 -3 237 132 0 0 chr17 29481285 29481323 -55957157 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 916 183 25 5 chr17 29481323 29481519 -55956961 + Charlie2a DNA MER1_type 1646 1845 -1017 2091 176 82 100 chr17 29481519 29482188 -55956292 - LTR8A LTR ERV1 0 727 71 340 259 129 24 chr17 29482223 29482367 -55956113 - L1M2 LINE L1 -696 7791 1804 1341 197 126 78 chr17 29482368 29482412 -55956068 + Charlie2a DNA MER1_type 1861 1901 -961 2330 62 7 36 chr17 29482412 29482719 -55955761 - AluY SINE Alu -13 298 1 1341 197 126 78 chr17 29482719 29482959 -55955521 + Charlie2a DNA MER1_type 1901 2128 -734 1928 138 28 3 chr17 29482959 29483242 -55955238 - AluSx SINE Alu -20 292 3 1341 197 126 78 chr17 29483242 29483615 -55954865 + Charlie2a DNA MER1_type 2128 2481 -381 1699 113 132 0 chr17 29483615 29483880 -55954600 - AluSg SINE Alu 0 300 1 1341 197 126 78 chr17 29483880 29483904 -55954576 + Charlie2a DNA MER1_type 2481 2502 -360 2086 82 6 75 chr17 29483904 29484222 -55954258 + AluSx SINE Alu 1 296 -16 1341 197 126 78 chr17 29484222 29484257 -55954223 + Charlie2a DNA MER1_type 2502 2615 -247 2504 70 0 10 chr17 29484290 29484603 -55953877 - AluY SINE Alu -1 310 1 529 193 8 17 chr17 29484769 29484881 -55953599 - AluJb SINE Alu 0 312 200 1529 165 0 8 chr17 29484881 29485118 -55953362 - AluJb SINE Alu -77 235 1 519 238 25 12 chr17 29485258 29485418 -55953062 - MLT1I LTR MaLR -3 406 245 305 192 13 39 chr17 29485522 29485600 -55952880 - MLT1I LTR MaLR -320 89 14 1860 93 28 0 chr17 29485668 29485843 -55952637 - AluSx SINE Alu 0 312 126 180 0 0 0 chr17 29485843 29485863 -55952617 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1860 93 28 0 chr17 29485863 29485935 -55952545 - AluSx SINE Alu -186 126 58 198 103 0 0 chr17 29486092 29486121 -55952359 + (T)n Simple_repeat Simple_repeat 1 29 0 514 197 55 24 chr17 29486361 29486488 -55951992 + MER5B DNA MER1_type 9 139 -39 220 344 0 11 chr17 29486839 29486929 -55951551 + G-rich Low_complexity Low_complexity 2 90 0 23 33 0 0 chr17 29487320 29487350 -55951130 + GC_rich Low_complexity Low_complexity 1 30 0 1984 142 22 65 chr17 29487656 29487700 -55950780 - L1MB4 LINE L1 -6 7593 7549 2194 101 0 26 chr17 29487700 29488007 -55950473 - AluSx SINE Alu -13 299 1 1984 142 22 65 chr17 29488007 29488018 -55950462 - L1MB4 LINE L1 -50 7549 7539 2291 61 0 55 chr17 29488018 29488328 -55950152 - AluY SINE Alu -18 293 1 1984 142 22 65 chr17 29488328 29488688 -55949792 - L1MB4 LINE L1 -60 7539 7195 2389 100 0 0 chr17 29488688 29488989 -55949491 - AluSc SINE Alu -8 301 1 3376 205 20 32 chr17 29488989 29489388 -55949092 - L1MB4 LINE L1 -734 6859 6457 2095 122 10 0 chr17 29489388 29489676 -55948804 - AluSq SINE Alu -17 296 6 3376 205 20 32 chr17 29489676 29489875 -55948605 - L1MB4 LINE L1 -1136 6457 6257 1378 151 159 8 chr17 29489875 29490127 -55948353 + AluJb SINE Alu 1 290 -12 3376 205 20 32 chr17 29490127 29490572 -55947908 - L1MB4 LINE L1 -1336 6257 5829 2244 111 7 0 chr17 29490573 29490893 -55947587 - AluSx SINE Alu 0 312 1 802 148 25 0 chr17 29490934 29491056 -55947424 + FLAM_C SINE Alu 13 137 -6 890 201 6 29 chr17 29491076 29491250 -55947230 + AluJb SINE Alu 120 289 -23 2381 87 3 0 chr17 29491920 29492219 -55946261 - AluSg SINE Alu -10 300 1 6901 131 94 18 chr17 29492220 29493283 -55945197 - L1MB4 LINE L1 -3372 4193 3212 2080 111 0 0 chr17 29493283 29493569 -55944911 - AluSx SINE Alu 0 306 21 1810 74 0 0 chr17 29493569 29493784 -55944696 - AluSq SINE Alu -97 216 1 6901 131 94 18 chr17 29493784 29494521 -55943959 - L1MB4 LINE L1 -4352 3213 2258 6647 61 18 26 chr17 29494522 29495408 -55943072 - SVA Other Other 0 1386 508 599 99 12 0 chr17 29495541 29495622 -55942858 - AluS SINE Alu -230 83 2 2557 171 14 57 chr17 29495622 29496516 -55941964 - L1M3 LINE L1 -575 5608 4758 1554 293 100 72 chr17 29496927 29498185 -55940295 + L2 LINE L2 1864 3172 -100 2081 100 50 0 chr17 29498185 29498464 -55940016 - AluSg SINE Alu -17 293 1 1554 293 100 72 chr17 29498464 29498569 -55939911 + L2 LINE L2 3172 3272 0 617 212 82 38 chr17 29498606 29498790 -55939690 + MIR SINE MIR 30 221 -41 277 262 184 64 chr17 29498819 29498960 -55939520 + MIR SINE MIR 94 251 -11 2116 133 0 10 chr17 29499201 29499501 -55938979 - AluSx SINE Alu -15 297 1 317 235 29 37 chr17 29499596 29499732 -55938748 - L1ME4a LINE L1 -4 6117 5983 2459 84 3 0 chr17 29500386 29500695 -55937785 - AluY SINE Alu -1 310 1 516 140 0 28 chr17 29500744 29500874 -55937606 - AluS SINE Alu -5 307 119 276 100 0 0 chr17 29500874 29500914 -55937566 + (T)n Simple_repeat Simple_repeat 1 40 0 1103 233 5 5 chr17 29502243 29502462 -55936018 + MIR SINE MIR 2 220 -42 933 170 0 0 chr17 29502629 29502776 -55935704 - AluSq/x SINE Alu -165 147 1 701 182 0 63 chr17 29502824 29502967 -55935513 + FLAM_C SINE Alu 3 136 -7 762 123 0 0 chr17 29502967 29503081 -55935399 - L1MA5A LINE L1 -17 6280 6167 940 196 6 0 chr17 29503182 29503350 -55935130 + AluSg/x SINE Alu 130 298 -14 2175 106 0 0 chr17 29503350 29503675 -55934805 + AluSg SINE Alu 1 325 0 499 132 0 0 chr17 29504167 29504243 -55934237 - MLT1A1 LTR MaLR 0 365 290 1690 174 17 11 chr17 29504243 29504530 -55933950 + AluJb SINE Alu 1 289 -23 398 143 13 0 chr17 29504530 29504607 -55933873 + GA-rich Low_complexity Low_complexity 1 78 0 258 136 0 0 chr17 29504601 29504645 -55933835 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 * 728 130 66 56 chr17 29504649 29504756 -55933724 - MLT1A1 LTR MaLR -55 341 237 2090 106 0 24 chr17 29504756 29505048 -55933432 - AluSx SINE Alu -5 307 23 728 130 66 56 chr17 29505048 29505183 -55933297 - MLT1A1 LTR MaLR -159 237 2 2168 115 7 3 chr17 29505554 29505849 -55932631 - AluSx SINE Alu -10 302 7 2063 123 3 19 chr17 29505864 29506180 -55932300 - AluY SINE Alu 0 311 1 867 112 17 28 chr17 29506775 29506953 -55931527 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 2336 69 0 50 chr17 29507211 29507531 -55930949 - AluY SINE Alu -7 304 1 1181 158 87 21 chr17 29508035 29508276 -55930204 - Tigger7 DNA MER2_type -3 2488 2232 2521 75 0 0 chr17 29510904 29511210 -55927270 - AluY SINE Alu -4 307 2 810 236 16 45 chr17 29561293 29561602 -55876878 + L1M4 LINE L1 2818 3117 -3029 484 303 121 27 chr17 29561738 29561881 -55876599 - L1MC/D LINE L1 -748 5792 5664 270 0 0 0 chr17 29561881 29561911 -55876569 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 484 303 121 27 chr17 29561911 29562061 -55876419 - L1MC/D LINE L1 -876 5664 5530 2412 93 0 19 chr17 29562061 29562374 -55876106 - AluSg SINE Alu -1 309 3 484 303 121 27 chr17 29562374 29562843 -55875637 - L1MC/D LINE L1 -1010 5530 5107 1971 137 0 7 chr17 29562843 29563128 -55875352 - AluSx SINE Alu -29 283 1 484 303 121 27 chr17 29563128 29563141 -55875339 - L1MC/D LINE L1 -1433 5107 5097 2678 36 7 0 chr17 29563141 29563450 -55875030 - AluY SINE Alu 0 311 1 484 303 121 27 chr17 29563450 29563671 -55874809 - L1MC/D LINE L1 -1443 5097 4918 2511 94 3 0 chr17 29563741 29564050 -55874430 + AluSp SINE Alu 1 310 -3 619 329 45 50 chr17 29564097 29564629 -55873851 - L1MDa LINE L1 -3532 3008 2425 2449 79 0 0 chr17 29565360 29565650 -55872830 - AluSq SINE Alu -13 300 11 248 304 0 14 chr17 29565670 29565739 -55872741 + MIR SINE MIR 60 127 -81 470 287 77 0 chr17 29565772 29565915 -55872565 + MLT1I LTR MaLR 25 178 -231 901 254 19 105 chr17 29566063 29566113 -55872367 - MLT1J LTR MaLR -44 467 414 2042 156 3 0 chr17 29566113 29566420 -55872060 - AluSx SINE Alu -4 308 1 901 254 19 105 chr17 29566420 29566684 -55871796 - MLT1J LTR MaLR -97 414 180 265 192 0 26 chr17 29566693 29566771 -55871709 + GA-rich Low_complexity Low_complexity 1 76 0 237 33 0 0 chr17 29567414 29567444 -55871036 + (TG)n Simple_repeat Simple_repeat 2 31 0 962 222 14 0 chr17 29567448 29567664 -55870816 - L1MC4a LINE L1 -1871 5937 5719 2296 113 3 0 chr17 29567690 29568000 -55870480 - AluSx SINE Alu -1 311 1 513 274 31 40 chr17 29568000 29568103 -55870377 - L1MC4a LINE L1 -2078 5730 5628 3710 102 28 2 chr17 29568103 29568643 -55869837 + MER41A LTR ERV1 1 554 0 513 274 31 40 chr17 29568643 29568753 -55869727 - L1MC4a LINE L1 -2180 5628 5517 329 316 11 0 chr17 29568782 29568877 -55869603 - MIR SINE MIR -122 140 45 469 268 49 0 chr17 29569445 29569587 -55868893 - MIR SINE MIR -76 186 38 342 0 0 0 chr17 29569784 29569822 -55868658 + (TG)n Simple_repeat Simple_repeat 2 39 0 277 319 116 14 chr17 29570123 29570330 -55868150 - MLT1K LTR MaLR -346 242 15 679 230 47 24 chr17 29570346 29570559 -55867921 + L2 LINE L2 2231 2448 -866 3545 143 20 15 chr17 29570603 29571044 -55867436 + MER41B LTR ERV1 1 381 -173 2175 101 7 0 chr17 29571044 29571369 -55867111 + AluSq SINE Alu 1 327 0 3545 143 20 15 chr17 29571369 29571544 -55866936 + MER41B LTR ERV1 381 554 0 689 312 51 45 chr17 29571544 29571558 -55866922 + L2 LINE L2 2875 2887 -426 2539 69 3 0 chr17 29571558 29571861 -55866619 - AluY SINE Alu -7 304 1 689 312 51 45 chr17 29571861 29572202 -55866278 + L2 LINE L2 2887 3232 -81 2154 109 0 0 chr17 29572203 29572477 -55866003 - AluSg SINE Alu -36 274 1 249 258 0 0 chr17 29572617 29572710 -55865770 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 2082 119 0 47 chr17 29572923 29573242 -55865238 - AluSx SINE Alu -8 304 1 476 285 20 13 chr17 29573558 29573709 -55864771 - MER117 DNA MER1_type -38 159 8 273 270 146 66 chr17 29573716 29573853 -55864627 - MIR3 SINE MIR -50 158 11 297 261 68 0 chr17 29573875 29573904 -55864576 - MER5B DNA MER1_type -79 99 73 2823 10 0 3 chr17 29573904 29574205 -55864275 - AluYa5 SINE Alu -11 300 1 297 261 68 0 chr17 29574205 29574263 -55864217 - MER5B DNA MER1_type -105 73 6 247 333 10 10 chr17 29574385 29574484 -55863996 + MER5A DNA MER1_type 66 164 -25 301 179 0 0 chr17 29575123 29575179 -55863301 - MIR SINE MIR -102 160 105 687 319 86 9 chr17 29575487 29575813 -55862667 + L1ME4a LINE L1 5582 5932 -189 1039 134 93 10 chr17 29576380 29576574 -55861906 - MER6B DNA MER2_type 0 210 1 273 151 0 0 chr17 29576895 29576948 -55861532 + (TG)n Simple_repeat Simple_repeat 1 53 0 2139 109 0 36 chr17 29577040 29577343 -55861137 + AluSc SINE Alu 1 292 -17 2371 105 0 0 chr17 29577345 29577651 -55860829 + AluSx SINE Alu 1 306 -6 2666 55 0 3 chr17 29577651 29577960 -55860520 + AluY SINE Alu 1 308 -3 1111 215 103 7 chr17 29578194 29578496 -55859984 - MLT1D LTR MaLR -6 499 169 235 254 16 16 chr17 29578599 29578662 -55859818 - MIR SINE MIR -70 138 76 2221 119 3 10 chr17 29579030 29579333 -55859147 - AluSx SINE Alu -11 301 1 424 259 76 57 chr17 29579568 29579683 -55858797 + MIR3 SINE MIR 40 160 -48 2022 131 3 56 chr17 29579683 29580004 -55858476 + AluSx SINE Alu 1 304 -8 424 259 76 57 chr17 29580004 29580046 -55858434 + MIR3 SINE MIR 160 200 -8 228 310 43 35 chr17 29581871 29581987 -55856493 - L2 LINE L2 -20 3252 3136 192 318 131 9 chr17 29582189 29582296 -55856184 + MIR SINE MIR 94 213 -49 193 198 10 115 chr17 29583721 29583817 -55854663 + L2 LINE L2 3153 3238 -75 1527 175 48 19 chr17 29583979 29584271 -55854209 + AluJo SINE Alu 7 306 0 2015 110 0 0 chr17 29584510 29584800 -55853680 + AluSx SINE Alu 31 320 0 209 280 19 128 chr17 29584806 29585063 -55853417 + L2 LINE L2 2813 3041 -231 358 200 39 12 chr17 29585186 29585279 -55853201 + MER20B DNA MER1_type 32 129 -90 188 242 65 0 chr17 29585340 29585402 -55853078 - MIR SINE MIR -62 146 81 2098 243 70 43 chr17 29585958 29586096 -55852384 - L1MC5 LINE L1 -50 7911 7778 222 37 0 0 chr17 29586096 29586123 -55852357 + (TG)n Simple_repeat Simple_repeat 2 28 0 2133 112 3 7 chr17 29586123 29586409 -55852071 - AluSx SINE Alu -27 285 1 2098 243 70 43 chr17 29586409 29586680 -55851800 - L1MC5 LINE L1 -183 7778 7516 2494 86 0 0 chr17 29586680 29586982 -55851498 - AluSq SINE Alu -10 303 2 2098 243 70 43 chr17 29586982 29587168 -55851312 - L1MC5 LINE L1 -445 7516 7336 423 0 0 0 chr17 29587168 29587215 -55851265 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 189 0 0 0 chr17 29587214 29587235 -55851245 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 2098 243 70 43 chr17 29587215 29587456 -55851024 - L1MC5 LINE L1 -625 7336 7070 316 309 59 7 chr17 29587456 29587592 -55850888 - MIR3 SINE MIR -29 179 37 262 228 158 44 chr17 29587616 29587730 -55850750 + MIR SINE MIR 24 150 -112 483 242 65 8 chr17 29588001 29588125 -55850355 - MER45A DNA AcHobo -44 134 4 225 236 56 0 chr17 29588197 29588269 -55850211 - MLT1K LTR MaLR 0 588 513 1583 163 110 3 chr17 29588367 29588649 -55849831 + AluJb SINE Alu 1 312 0 1782 156 30 0 chr17 29588662 29588931 -55849549 + AluJo SINE Alu 3 279 -33 189 0 0 0 chr17 29588931 29588952 -55849528 + (CAAT)n Simple_repeat Simple_repeat 3 23 0 1075 42 14 42 chr17 29589013 29589155 -55849325 + AluY SINE Alu 1 138 -173 1199 101 0 6 chr17 29589255 29589413 -55849067 + AluYa5 SINE Alu 145 301 -10 2310 95 0 7 chr17 29589538 29589834 -55848646 - AluSx SINE Alu -18 294 1 375 242 36 68 chr17 29589895 29590143 -55848337 + HAL1 LINE L1 2222 2461 -46 1183 209 0 4 chr17 29590149 29590379 -55848101 + MER46A DNA MER2_type 8 236 0 2203 104 17 10 chr17 29590561 29590859 -55847621 - AluSq SINE Alu -13 300 1 259 260 190 40 chr17 29590918 29591118 -55847362 - MLT1K LTR MaLR -349 239 10 199 274 39 0 chr17 29591411 29591462 -55847018 + MIR SINE MIR 91 143 -65 284 257 143 0 chr17 29592063 29592168 -55846312 - L2 LINE L2 0 3313 3194 1006 291 80 54 chr17 29592302 29592787 -55845693 - MLT1K LTR MaLR 0 588 91 732 142 0 0 chr17 29593228 29593341 -55845139 + FLAM_C SINE Alu 6 118 -25 262 108 0 0 chr17 29593364 29593401 -55845079 + FLAM_A SINE Alu 81 117 -16 28 0 0 26 chr17 29593404 29593426 -55845054 + AT_rich Low_complexity Low_complexity 1 23 -15 2239 126 3 0 chr17 29593426 29593736 -55844744 + AluSx SINE Alu 1 311 -1 28 0 0 26 chr17 29593736 29593752 -55844728 + AT_rich Low_complexity Low_complexity 23 38 0 188 132 0 79 chr17 29593817 29593855 -55844625 + MIR SINE MIR 21 55 -207 255 159 125 102 chr17 29594381 29594469 -55844011 + MIR3 SINE MIR 104 193 -15 375 23 0 0 chr17 29594510 29594554 -55843926 + (CAT)n Simple_repeat Simple_repeat 3 46 0 336 247 195 37 chr17 29594954 29595144 -55843336 - MLT1K LTR MaLR -349 239 20 348 244 37 0 chr17 29595305 29595387 -55843093 + MIR SINE MIR 62 146 -62 1840 204 47 49 chr17 29595402 29595913 -55842567 + L1ME1 LINE L1 5652 6161 -5 2111 150 0 6 chr17 29596010 29596324 -55842156 + AluJo SINE Alu 1 312 0 965 246 60 38 chr17 29596360 29596475 -55842005 - MLT1K LTR MaLR -57 531 420 2302 91 20 3 chr17 29596475 29596772 -55841708 - AluY SINE Alu -9 302 1 965 246 60 38 chr17 29596772 29596973 -55841507 - MLT1K LTR MaLR -168 420 208 230 250 44 0 chr17 29598678 29598746 -55839734 + MIR SINE MIR 79 149 -113 285 287 66 25 chr17 29598990 29599112 -55839368 + MIR SINE MIR 20 146 -62 1377 153 90 60 chr17 29599316 29599445 -55839035 + AluJo SINE Alu 1 125 -187 2309 111 0 0 chr17 29599445 29599751 -55838729 + AluSx SINE Alu 3 308 -4 1377 153 90 60 chr17 29599751 29599922 -55838558 + AluJo SINE Alu 125 310 -2 380 259 23 38 chr17 29599933 29600064 -55838416 - MER5B DNA MER1_type -49 129 1 1814 164 0 3 chr17 29600433 29600743 -55837737 - AluJb SINE Alu 0 309 1 2341 93 0 26 chr17 29600853 29601166 -55837314 + AluY SINE Alu 1 305 -6 2059 155 0 3 chr17 29601215 29601518 -55836962 + AluJb SINE Alu 1 302 -10 2076 134 3 7 chr17 29602219 29602524 -55835956 + AluSx SINE Alu 1 304 -8 2260 104 3 22 chr17 29602547 29602863 -55835617 + AluSg SINE Alu 1 310 0 1892 164 42 6 chr17 29602923 29603258 -55835222 - MER7A DNA MER2_type -1 345 1 1557 144 0 0 chr17 29603469 29603691 -55834789 - AluSg/x SINE Alu -5 305 84 319 267 69 69 chr17 29605790 29605921 -55832559 + MIR SINE MIR 61 191 -71 576 257 109 0 chr17 29606382 29606565 -55831915 + MIR SINE MIR 60 262 0 206 222 143 16 chr17 29606568 29606631 -55831849 + L2 LINE L2 2993 3063 -209 273 295 208 7 chr17 29606717 29606866 -55831614 + MER5A DNA MER1_type 11 189 0 375 255 98 26 chr17 29607328 29607481 -55830999 + MER46C DNA MER2_type 1 164 -174 345 269 8 50 chr17 29608709 29608767 -55829713 + MER58A DNA MER1_type 2 54 -287 2201 135 0 0 chr17 29608767 29609079 -55829401 - AluSx SINE Alu 0 312 1 345 269 8 50 chr17 29609079 29609139 -55829341 + MER58A DNA MER1_type 54 115 -109 858 230 127 3 chr17 29609390 29609681 -55828799 - MER46C DNA MER2_type -11 327 1 800 143 0 8 chr17 29610399 29610518 -55827962 + FLAM_C SINE Alu 1 118 -25 1894 143 82 6 chr17 29611593 29612184 -55826296 + MER39 LTR ERV1 4 707 0 976 157 0 30 chr17 29613019 29613172 -55825308 - AluJo SINE Alu -30 282 133 1603 184 10 16 chr17 29613172 29613476 -55825004 - AluJo SINE Alu -10 302 1 976 157 0 30 chr17 29613476 29613488 -55824992 - AluJo SINE Alu -179 133 122 291 325 127 42 chr17 29613884 29614050 -55824430 - MIR SINE MIR -27 235 56 211 169 62 77 chr17 29615457 29615522 -55822958 + L2 LINE L2 3174 3237 -35 274 331 60 8 chr17 29615583 29615716 -55822764 - MIR SINE MIR -114 148 9 28 0 0 0 chr17 29615885 29615913 -55822567 + AT_rich Low_complexity Low_complexity 1 28 0 1760 148 50 3 chr17 29615913 29616261 -55822219 + AluSx SINE Alu 1 362 0 2201 128 0 0 chr17 29616263 29616575 -55821905 + AluSx SINE Alu 1 312 0 24 53 0 0 chr17 29616575 29616613 -55821867 + AT_rich Low_complexity Low_complexity 1 38 0 460 325 150 5 chr17 29616654 29616854 -55821626 - MIR SINE MIR -32 230 2 22 35 0 0 chr17 29620056 29620085 -55818395 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr17 29620475 29620498 -55817982 + GC_rich Low_complexity Low_complexity 1 23 0 29 90 0 0 chr17 29620776 29620854 -55817626 + GC_rich Low_complexity Low_complexity 1 78 0 1543 116 104 37 chr17 29621478 29621746 -55816734 + AluJo SINE Alu 1 286 -26 341 226 0 52 chr17 29622755 29622870 -55815610 - MER113 DNA MER1_type? -409 112 4 1885 145 0 43 chr17 29622870 29623195 -55815285 + AluJb SINE Alu 1 311 -1 278 300 143 31 chr17 29623241 29623464 -55815016 + MER112 DNA MER1_type 1 248 -12 1672 120 93 0 chr17 29623513 29623798 -55814682 - AluSx SINE Alu 0 309 1 214 371 10 23 chr17 29624042 29624218 -55814262 + MIR3 SINE MIR 30 206 -2 255 212 91 0 chr17 29624745 29624811 -55813669 + LTR16A LTR ERVL 33 104 -346 253 236 56 11 chr17 29625228 29625317 -55813163 + MIR3 SINE MIR 76 168 -40 291 333 12 0 chr17 29625566 29625647 -55812833 + L2 LINE L2 2986 3067 -205 555 294 9 35 chr17 29625831 29626062 -55812418 + L1MC5 LINE L1 7290 7514 -447 2404 81 7 0 chr17 29626358 29626665 -55811815 + AluSq SINE Alu 1 309 -4 256 376 16 0 chr17 29627078 29627203 -55811277 - MIR3 SINE MIR -6 202 76 1855 139 10 7 chr17 29627496 29627784 -55810696 - AluSx SINE Alu -22 290 2 933 148 0 0 chr17 29627784 29627919 -55810561 - AluJo SINE Alu -177 135 1 2576 32 0 10 chr17 29628018 29628328 -55810152 + AluY SINE Alu 1 307 -4 461 327 107 21 chr17 29628658 29628939 -55809541 + L3 LINE CR1 917 1221 -356 23 68 0 0 chr17 29629269 29629313 -55809167 + GC_rich Low_complexity Low_complexity 1 44 0 229 286 16 0 chr17 29629513 29629576 -55808904 - tRNA-Arg-AGG tRNA tRNA -8 68 5 207 229 0 72 chr17 29629641 29629724 -55808756 + C-rich Low_complexity Low_complexity 4 80 0 236 226 0 75 chr17 29630012 29630105 -55808375 + G-rich Low_complexity Low_complexity 4 89 0 2141 103 14 3 chr17 29630817 29631109 -55807371 - AluSq SINE Alu -18 295 1 494 65 0 0 chr17 29631142 29631204 -55807276 + AluSg SINE Alu 1 62 -248 1350 191 86 27 chr17 29631211 29631611 -55806869 + L1 LINE L1 4904 5330 -816 1417 196 53 18 chr17 29631611 29631896 -55806584 + AluJo SINE Alu 1 295 -17 605 189 105 0 chr17 29631905 29632048 -55806432 + L1MC1 LINE L1 6174 6331 -2 2196 140 42 100 chr17 29632050 29632127 -55806353 + L1MC1 LINE L1 5817 5897 -436 2023 181 70 0 chr17 29632127 29632497 -55805983 + MSTD LTR MaLR 1 396 0 2196 140 42 100 chr17 29632497 29632968 -55805512 + L1MC1 LINE L1 5897 6333 0 2060 127 3 3 chr17 29632968 29633260 -55805220 + AluSx SINE Alu 1 292 -20 1730 129 0 0 chr17 29633302 29633550 -55804930 + AluSg SINE Alu 62 309 -1 764 230 120 23 chr17 29633767 29633984 -55804496 - L2 LINE L2 0 3313 3076 2166 91 0 30 chr17 29633990 29634287 -55804193 - AluSc SINE Alu -21 288 1 2515 62 0 0 chr17 29634307 29634616 -55803864 - AluY SINE Alu -2 309 1 2024 111 3 3 chr17 29634642 29634931 -55803549 + AluSx SINE Alu 2 290 -22 792 241 103 53 chr17 29634932 29635414 -55803066 + MLT1H LTR MaLR 1 549 0 194 185 56 56 chr17 29635531 29635585 -55802895 + MIR SINE MIR 100 153 -55 2241 107 0 0 chr17 29635820 29636128 -55802352 - AluSc SINE Alu -1 308 1 370 224 58 129 chr17 29636240 29636534 -55801946 - MLT1H1 LTR MaLR 0 555 163 1957 104 58 4 chr17 29636534 29636812 -55801668 + AluSq SINE Alu 1 293 -20 370 224 58 129 chr17 29636812 29636935 -55801545 - MLT1H1 LTR MaLR -392 163 33 587 238 199 0 chr17 29638040 29638221 -55800259 + MIR SINE MIR 34 250 -12 1176 232 52 7 chr17 29638632 29638942 -55799538 + MLT1B LTR MaLR 59 382 -8 206 263 79 35 chr17 29639090 29639204 -55799276 + L2 LINE L2 2929 3047 -266 383 256 109 29 chr17 29639225 29639362 -55799118 - MER5B DNA MER1_type -3 175 28 245 306 117 68 chr17 29639577 29639842 -55798638 + L2 LINE L2 2977 3254 -18 473 137 63 40 chr17 29640181 29640319 -55798161 + MLT1C LTR MaLR 1 128 -262 357 150 0 0 chr17 29640324 29640384 -55798096 - MER53 DNA DNA -128 61 2 2223 123 0 0 chr17 29640429 29640739 -55797741 + AluSx SINE Alu 1 310 -2 917 111 0 42 chr17 29643298 29643442 -55795038 - AluSq/x SINE Alu -175 138 1 788 189 24 12 chr17 29644176 29644345 -55794135 + MER5B DNA MER1_type 8 178 0 864 132 7 21 chr17 29644373 29644517 -55793963 - FLAM_C SINE Alu -1 142 1 422 260 39 8 chr17 29644961 29645088 -55793392 + MER5B DNA MER1_type 26 156 -22 1792 154 25 7 chr17 29645092 29645378 -55793102 + AluJo SINE Alu 1 291 -21 405 189 63 0 chr17 29645382 29645477 -55793003 + MER53 DNA DNA 89 189 0 296 267 0 58 chr17 29648237 29648323 -55790157 - MER5B DNA MER1_type -53 125 45 1607 166 20 33 chr17 29650087 29650388 -55788092 + AluJo SINE Alu 1 297 -15 1042 171 6 0 chr17 29650389 29650564 -55787916 + AluJo/FRAM SINE Alu 133 308 -4 324 160 40 40 chr17 29651535 29651610 -55786870 - L1ME4a LINE L1 -1 6120 6046 1872 136 27 7 chr17 29652036 29652337 -55786143 - AluSx SINE Alu -5 307 1 2062 75 82 0 chr17 29652712 29652991 -55785489 - AluSc SINE Alu -7 302 1 227 176 137 0 chr17 29654322 29654373 -55784107 + MIR SINE MIR 117 174 -88 29 47 0 0 chr17 29658757 29658800 -55779680 + AT_rich Low_complexity Low_complexity 1 43 0 2392 62 3 0 chr17 29658852 29659159 -55779321 + AluY SINE Alu 4 311 0 326 111 79 0 chr17 29659174 29659237 -55779243 + MER41B LTR ERV1 482 549 -86 1310 151 10 0 chr17 29659322 29659528 -55778952 + MER2 DNA MER2_type 3 210 -135 1540 126 74 4 chr17 29659534 29659803 -55778677 - AluSx SINE Alu -3 309 22 348 203 27 0 chr17 29659930 29660004 -55778476 - MER116 DNA Mariner -1 79 4 2497 71 0 0 chr17 29660341 29660652 -55777828 + AluY SINE Alu 1 311 0 1231 109 0 0 chr17 29660652 29660826 -55777654 + AluSc SINE Alu 129 302 -7 309 318 83 8 chr17 29660828 29660907 -55777573 - L1ME4a LINE L1 -95 6026 5932 2174 127 3 0 chr17 29660907 29661223 -55777257 - 7SLRNA srpRNA srpRNA -3 317 1 309 318 83 8 chr17 29661223 29661275 -55777205 - L1ME4a LINE L1 -189 5932 5885 1072 149 6 0 chr17 29661277 29661445 -55777035 - AluJ SINE Alu -9 303 135 336 344 162 20 chr17 29661547 29661794 -55776686 - L1ME4a LINE L1 -278 5843 5562 4036 82 35 105 chr17 29662309 29662893 -55775587 + MER51A LTR ERV1 1 533 -101 2118 92 7 0 chr17 29662893 29663187 -55775293 + AluY SINE Alu 6 301 -10 4036 82 35 105 chr17 29663187 29663281 -55775199 + MER51A LTR ERV1 533 632 -2 370 313 127 0 chr17 29663448 29663598 -55774882 + MIR SINE MIR 81 249 -13 419 312 50 0 chr17 29664463 29664604 -55773876 - MIR SINE MIR -6 256 109 225 0 0 0 chr17 29664630 29664655 -55773825 + (CAGGG)n Simple_repeat Simple_repeat 2 26 0 394 265 23 30 chr17 29667219 29667351 -55771129 + MIR SINE MIR 15 145 -117 207 397 26 9 chr17 29668171 29668287 -55770193 + MIR3 SINE MIR 4 121 -87 469 252 157 52 chr17 29668399 29668609 -55769871 + MIR SINE MIR 17 248 -14 228 22 43 43 chr17 29668610 29668656 -55769824 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 713 165 0 9 chr17 29668662 29668777 -55769703 - AluJ SINE Alu -59 253 140 401 186 0 0 chr17 29670423 29670493 -55767987 - AluJ SINE Alu -175 137 68 1746 138 35 7 chr17 29671527 29671809 -55766671 + AluJb SINE Alu 1 290 -22 249 33 0 0 chr17 29671814 29671844 -55766636 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 675 242 0 0 chr17 29671863 29671987 -55766493 + FLAM_A SINE Alu 1 124 -9 5951 128 20 21 chr17 29672060 29672360 -55766120 + L1MA6 LINE L1 5255 5554 -746 2223 95 0 3 chr17 29672360 29672655 -55765825 - AluSg SINE Alu -14 296 3 5951 128 20 21 chr17 29672655 29673396 -55765084 + L1MA6 LINE L1 5554 6295 -5 289 246 71 0 chr17 29673417 29673543 -55764937 + L1M4 LINE L1 2121 2255 -3891 1182 134 119 51 chr17 29673665 29673918 -55764562 + AluJo SINE Alu 12 281 -31 381 325 79 32 chr17 29673932 29674184 -55764296 - L1MCa LINE L1 -4257 2169 1906 364 327 148 25 chr17 29674093 29674371 -55764109 + L1M4 LINE L1 2370 2681 -3465 * 439 226 11 0 chr17 29674711 29674804 -55763676 - MER5A DNA MER1_type -95 94 1 246 248 86 71 chr17 29674807 29675017 -55763463 + L1MC5 LINE L1 7501 7713 -248 950 90 0 15 chr17 29675087 29675220 -55763260 + AluSg SINE Alu 1 131 -179 2244 86 0 3 chr17 29675224 29675525 -55762955 + AluY SINE Alu 1 300 -11 1098 130 5 14 chr17 29675597 29675805 -55762675 - L1M1 LINE L1 -811 5494 5289 2252 117 29 81 chr17 29676210 29676335 -55762145 + MLT1B LTR MaLR 1 131 -259 2149 99 0 0 chr17 29676335 29676638 -55761842 + AluSx SINE Alu 14 316 0 2252 117 29 81 chr17 29676638 29676920 -55761560 + MLT1B LTR MaLR 131 388 -2 2180 120 0 0 chr17 29677058 29677358 -55761122 - AluSx SINE Alu -12 300 1 1965 131 28 103 chr17 29677381 29677417 -55761063 + MER47A DNA MER2_type 1 38 -2285 1838 142 0 26 chr17 29677417 29677719 -55760761 - AluSx SINE Alu -16 296 3 1965 131 28 103 chr17 29677719 29677847 -55760633 + MER47A DNA MER2_type 38 174 -2149 2074 70 70 0 chr17 29677847 29678114 -55760366 + AluY SINE Alu 1 291 -20 207 69 0 0 chr17 29678114 29678143 -55760337 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 2074 70 70 0 chr17 29678143 29678162 -55760318 + AluY SINE Alu 291 307 -4 1965 131 28 103 chr17 29678162 29678392 -55760088 + MER47A DNA MER2_type 174 366 0 2457 67 0 0 chr17 29678614 29678912 -55759568 - AluSc SINE Alu -11 298 1 2165 119 0 3 chr17 29680000 29680310 -55758170 + AluSc SINE Alu 1 309 0 2217 99 0 0 chr17 29682270 29682573 -55755907 - AluSx SINE Alu -9 303 1 185 239 0 65 chr17 29682606 29682652 -55755828 - L2 LINE L2 -12 3260 3218 * 228 275 184 18 chr17 29682638 29682747 -55755733 - MIR SINE MIR -102 160 34 271 294 0 35 chr17 29683346 29683431 -55755049 - MIR SINE MIR -132 130 49 343 277 88 0 chr17 29683561 29683698 -55754782 - MER104 DNA Tc2 -3 177 29 1682 173 44 0 chr17 29683993 29684288 -55754192 + AluJo SINE Alu 1 308 -4 798 161 0 56 chr17 29684879 29685022 -55753458 + AluSq/x SINE Alu 2 136 -177 329 219 0 14 chr17 29685238 29685311 -55753169 - MIR SINE MIR -38 224 153 739 214 0 31 chr17 29685316 29685475 -55753005 - MIR SINE MIR -78 184 31 302 289 21 31 chr17 29685889 29685986 -55752494 - MIR SINE MIR -79 129 34 651 270 255 27 chr17 29687965 29688369 -55750111 + L2 LINE L2 2814 3309 -4 1628 154 20 33 chr17 29688798 29689104 -55749376 + AluJb SINE Alu 1 302 -10 25 95 0 0 chr17 29691304 29691378 -55747102 + GC_rich Low_complexity Low_complexity 1 74 0 22 0 0 0 chr17 29691546 29691568 -55746912 + GC_rich Low_complexity Low_complexity 1 22 0 182 37 37 0 chr17 29691669 29691696 -55746784 + (CGGGGG)n Simple_repeat Simple_repeat 3 30 0 579 104 179 0 chr17 29692249 29692355 -55746125 + FLAM_C SINE Alu 2 126 -17 246 160 0 0 chr17 29692643 29692693 -55745787 + (CA)n Simple_repeat Simple_repeat 2 51 0 499 262 0 10 chr17 29693072 29693175 -55745305 + AluJo/FLAM SINE Alu 2 103 -209 1188 132 28 38 chr17 29693176 29693388 -55745092 + AluJo SINE Alu 73 282 -30 204 40 0 0 chr17 29693388 29693413 -55745067 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2080 96 0 0 chr17 29693424 29693695 -55744785 - AluSg SINE Alu -39 271 1 357 243 147 15 chr17 29693748 29693884 -55744596 + MIR SINE MIR 25 178 -84 348 317 156 27 chr17 29694378 29694602 -55743878 + MIR SINE MIR 8 260 -2 749 312 57 0 chr17 29694629 29694876 -55743604 + MIR SINE MIR 2 262 0 900 167 0 42 chr17 29695248 29695278 -55743202 - AluJo/FRAM SINE Alu -15 297 267 2213 105 7 0 chr17 29695278 29695584 -55742896 + AluSx SINE Alu 1 308 -4 900 167 0 42 chr17 29695584 29695721 -55742759 - AluJo/FRAM SINE Alu -45 267 137 361 270 16 48 chr17 29696193 29696319 -55742161 - MIR SINE MIR -65 143 22 2327 94 0 0 chr17 29696428 29696736 -55741744 - AluSg SINE Alu -2 308 1 1979 131 26 3 chr17 29697033 29697338 -55741142 - AluSx SINE Alu 0 312 1 208 323 50 0 chr17 29697506 29697605 -55740875 + MIR3 SINE MIR 93 196 -12 378 263 42 111 chr17 29698265 29698455 -55740025 + MER5B DNA MER1_type 1 177 -1 285 131 0 0 chr17 29698523 29698584 -55739896 + (TTCA)n Simple_repeat Simple_repeat 1 61 0 450 232 109 62 chr17 29698585 29698796 -55739684 - L2 LINE L2 -2 3311 3091 2231 79 9 22 chr17 29698825 29699141 -55739339 - AluSx SINE Alu 0 312 1 382 264 124 3 chr17 29699474 29699632 -55738848 + MIR SINE MIR 3 174 -58 290 248 248 0 chr17 29699720 29699833 -55738647 - MIR3 SINE MIR -1 207 67 263 304 43 17 chr17 29699883 29699998 -55738482 + L2 LINE L2 2942 3059 -213 277 257 229 0 chr17 29700476 29700585 -55737895 - MIR SINE MIR -27 235 102 2270 88 14 0 chr17 29701335 29701632 -55736848 + AluSx SINE Alu 1 301 -11 1122 155 82 5 chr17 29701655 29701874 -55736606 - MIR SINE MIR -21 241 6 201 266 107 112 chr17 29703044 29703144 -55735336 + MIR SINE MIR 46 145 -117 2318 103 0 0 chr17 29703144 29703456 -55735024 + AluSx SINE Alu 1 312 0 3540 183 42 22 chr17 29703459 29704099 -55734381 + MER82 DNA MER2_type 1 653 0 201 266 107 112 chr17 29704099 29704163 -55734317 + MIR SINE MIR 147 213 -49 318 254 206 5 chr17 29704414 29704603 -55733877 + L2 LINE L2 1443 1669 -1645 943 98 0 15 chr17 29704740 29704912 -55733568 - AluSg/x SINE Alu 0 323 154 2062 126 10 0 chr17 29704932 29705233 -55733247 - AluSx SINE Alu -8 304 1 294 254 26 53 chr17 29705328 29705442 -55733038 + L2 LINE L2 2186 2296 -1018 852 276 47 0 chr17 29705445 29705702 -55732778 - LTR16A LTR ERVL -53 397 129 324 301 103 0 chr17 29705994 29706074 -55732406 + L2 LINE L2 2594 2664 -650 1827 142 7 0 chr17 29706074 29706362 -55732118 - AluJo SINE Alu -22 290 1 324 301 103 0 chr17 29706362 29706427 -55732053 + L2 LINE L2 2664 2754 -560 2237 105 3 0 chr17 29706564 29706869 -55731611 - AluSx SINE Alu -6 306 1 290 280 121 38 chr17 29706873 29707112 -55731368 + L2 LINE L2 2996 3254 -59 2215 81 7 3 chr17 29707442 29707738 -55730742 - AluSq SINE Alu -16 297 1 442 257 135 0 chr17 29708008 29708156 -55730324 + MIR SINE MIR 47 214 -48 1743 172 7 7 chr17 29708255 29708551 -55729929 + AluJb SINE Alu 1 296 -16 395 253 62 34 chr17 29708828 29708974 -55729506 + MIR SINE MIR 94 243 -19 237 344 53 38 chr17 29709632 29709763 -55728717 + MIR3 SINE MIR 35 167 -41 1773 129 33 40 chr17 29709969 29710271 -55728209 - AluJb SINE Alu -12 300 1 223 306 56 0 chr17 29710375 29710447 -55728033 + L2 LINE L2 3197 3272 0 411 226 59 10 chr17 29710545 29710647 -55727833 - MIR SINE MIR 0 262 156 513 170 114 54 chr17 29710658 29710775 -55727705 + MER69 DNA AcHobo 8 117 -2409 2239 91 0 3 chr17 29710775 29711071 -55727409 - AluSc SINE Alu -14 295 1 513 170 114 54 chr17 29711071 29711142 -55727338 + MER69 DNA AcHobo 117 2522 -4 367 260 136 2 chr17 29711151 29711263 -55727217 - MIR SINE MIR -60 148 37 2032 94 3 24 chr17 29712201 29712530 -55725950 + AluSx SINE Alu 1 323 0 202 303 37 46 chr17 29713056 29713165 -55725315 + MIR SINE MIR 61 168 -94 * 688 278 90 4 chr17 29713148 29713382 -55725098 - MIR SINE MIR -8 254 1 2147 81 0 42 chr17 29713469 29713778 -55724702 - AluSc SINE Alu -13 296 1 1855 145 29 10 chr17 29713778 29714088 -55724392 - 7SLRNA srpRNA srpRNA -3 317 1 186 43 0 0 chr17 29714099 29714122 -55724358 + (T)n Simple_repeat Simple_repeat 1 23 0 224 259 161 0 chr17 29714268 29714349 -55724131 + MER5A DNA MER1_type 50 143 -46 282 289 141 21 chr17 29714399 29714541 -55723939 + MIR3 SINE MIR 10 168 -40 2039 139 7 0 chr17 29714575 29714885 -55723595 + AluJb SINE Alu 1 312 0 2231 109 3 0 chr17 29714886 29715197 -55723283 + AluSq SINE Alu 1 312 -1 2021 135 3 3 chr17 29715523 29715835 -55722645 + AluSx SINE Alu 1 312 0 1789 69 4 4 chr17 29715841 29716073 -55722407 + AluSq SINE Alu 3 234 -79 520 308 72 21 chr17 29716222 29716459 -55722021 - MIR SINE MIR -6 256 8 2240 107 3 0 chr17 29716707 29717017 -55721463 + AluSx SINE Alu 1 311 -1 276 290 9 48 chr17 29717041 29717157 -55721323 + MIR SINE MIR 11 122 -86 778 178 13 26 chr17 29717247 29717350 -55721130 + MER5B DNA MER1_type 17 119 -59 2216 109 0 13 chr17 29717350 29717663 -55720817 - AluSx SINE Alu -3 309 1 778 178 13 26 chr17 29717663 29717711 -55720769 + MER5B DNA MER1_type 119 166 -12 204 214 162 68 chr17 29717731 29717848 -55720632 - MER5A DNA MER1_type -1 188 61 574 82 0 0 chr17 29717848 29717921 -55720559 + AluJ/FRAM SINE Alu 224 296 -16 532 176 0 0 chr17 29717922 29718007 -55720473 + AluS SINE Alu 2 86 -227 332 289 19 0 chr17 29718126 29718230 -55720250 - MER103 DNA DNA -25 141 36 1019 167 6 0 chr17 29718733 29718901 -55719579 + AluJo SINE Alu 121 289 -23 430 243 71 30 chr17 29719146 29719315 -55719165 - MIR SINE MIR -66 196 21 207 0 0 0 chr17 29720137 29720160 -55718320 + (TAA)n Simple_repeat Simple_repeat 2 24 0 288 223 65 115 chr17 29720254 29720393 -55718087 - MIR SINE MIR -84 178 47 292 241 218 0 chr17 29720587 29720674 -55717806 + MER91C DNA MER1_type 1 106 -34 256 340 57 7 chr17 29720912 29721053 -55717427 - MER103 DNA DNA -1 165 18 324 289 41 25 chr17 29721483 29721604 -55716876 + MIR SINE MIR 57 179 -83 318 257 23 35 chr17 29721733 29721904 -55716576 + (CAGAGA)n Simple_repeat Simple_repeat 5 173 0 207 250 0 0 chr17 29722046 29722094 -55716386 + C-rich Low_complexity Low_complexity 3 50 0 870 200 68 89 chr17 29722484 29722854 -55715626 + MER92B LTR ERV1 271 632 -4 1686 138 48 0 chr17 29723147 29723416 -55715064 + AluJb SINE Alu 11 292 -20 1075 254 92 55 chr17 29724101 29724624 -55713856 + MER34 LTR ERV1 1 542 0 2043 114 0 0 chr17 29724749 29725030 -55713450 - AluSx SINE Alu -19 293 13 2147 122 0 0 chr17 29725071 29725366 -55713114 + AluSx SINE Alu 1 295 -17 1510 104 133 0 chr17 29725822 29726063 -55712417 - AluSx SINE Alu 0 312 40 531 322 6 17 chr17 29726064 29726241 -55712239 - MIR SINE MIR -57 205 31 2015 133 0 16 chr17 29726260 29726576 -55711904 - AluJo SINE Alu -1 311 1 947 297 104 47 chr17 29727355 29727505 -55710975 - L2 LINE L2 0 3313 3173 1364 147 57 0 chr17 29727505 29727750 -55710730 + L1MA4 LINE L1 6039 6297 -3 947 297 104 47 chr17 29727750 29728163 -55710317 - L2 LINE L2 -140 3173 2785 2389 82 0 0 chr17 29728163 29728467 -55710013 - AluSx SINE Alu -8 304 1 947 297 104 47 chr17 29728467 29729042 -55709438 - L2 LINE L2 -528 2785 2097 1673 113 0 4 chr17 29729042 29729323 -55709157 + AluSx SINE Alu 44 323 0 947 297 104 47 chr17 29729323 29729380 -55709100 - L2 LINE L2 -1216 2097 2045 1241 171 94 14 chr17 29729446 29729721 -55708759 + L1MA5A LINE L1 5957 6253 -44 219 331 96 78 chr17 29729721 29729774 -55708706 - L2 LINE L2 -1366 1948 1897 1385 156 9 103 chr17 29729774 29730094 -55708386 + AluJo SINE Alu 1 290 -22 219 331 96 78 chr17 29730094 29730553 -55707927 - L2 LINE L2 -1417 1897 1427 371 333 61 17 chr17 29730650 29730830 -55707650 - MIR SINE MIR -55 207 20 1485 181 50 20 chr17 29731113 29731412 -55707068 + AluJo SINE Alu 1 308 -4 1769 145 32 0 chr17 29731534 29731816 -55706664 + AluJb SINE Alu 2 292 -20 2062 100 7 0 chr17 29731826 29732139 -55706341 + AluSq SINE Alu 5 319 0 1490 163 7 31 chr17 29732157 29732331 -55706149 - AluJb SINE Alu -5 307 130 231 36 0 0 chr17 29732331 29732359 -55706121 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2281 46 0 7 chr17 29732359 29732639 -55705841 - AluY SINE Alu -30 281 4 1490 163 7 31 chr17 29732639 29732757 -55705723 - AluJb SINE Alu -180 132 21 24 0 0 0 chr17 29733466 29733490 -55704990 + AT_rich Low_complexity Low_complexity 1 24 0 1241 211 55 105 chr17 29733524 29733756 -55704724 + L1MC4 LINE L1 7508 7750 -292 2370 65 0 16 chr17 29733756 29734062 -55704418 + AluSg SINE Alu 1 301 -9 333 0 0 0 chr17 29734062 29734099 -55704381 + (TA)n Simple_repeat Simple_repeat 2 38 0 1241 211 55 105 chr17 29734099 29734428 -55704052 + L1MC4 LINE L1 7748 8042 0 373 278 19 19 chr17 29734718 29734880 -55703600 - LTR37B LTR ERV1 -81 387 226 1876 149 0 16 chr17 29735696 29736004 -55702476 - AluSx SINE Alu -8 304 2 362 302 184 13 chr17 29736106 29736366 -55702114 + L1ME LINE L1 4943 5229 -917 2363 89 0 0 chr17 29736653 29736956 -55701524 - AluSx SINE Alu -9 303 1 1264 184 23 9 chr17 29737005 29737223 -55701257 - MER58A DNA MER1_type -3 221 1 2421 54 0 3 chr17 29737335 29737630 -55700850 + AluY SINE Alu 1 294 -17 300 308 13 0 chr17 29737635 29737713 -55700767 + L1ME LINE L1 5742 5820 -301 2091 117 0 0 chr17 29737806 29738115 -55700365 + AluSq SINE Alu 1 309 0 676 318 67 46 chr17 29738143 29738308 -55700172 + L1ME LINE L1 4301 4461 -1660 2130 111 0 13 chr17 29738308 29738624 -55699856 + AluSq SINE Alu 1 312 -1 676 318 67 46 chr17 29738624 29738835 -55699645 + L1ME LINE L1 4461 4666 -1455 2180 125 0 0 chr17 29738835 29739147 -55699333 - AluSx SINE Alu 0 312 1 676 318 67 46 chr17 29739147 29739705 -55698775 + L1ME LINE L1 4666 5277 -844 1700 157 20 0 chr17 29739705 29739823 -55698657 + AluSx SINE Alu 9 123 -189 246 32 0 0 chr17 29739823 29739854 -55698626 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1700 157 20 0 chr17 29739854 29740029 -55698451 + AluSx SINE Alu 123 308 -4 676 318 67 46 chr17 29740029 29740467 -55698013 + L1ME LINE L1 5277 5704 -417 297 342 61 56 chr17 29740632 29740676 -55697804 - L2 LINE L2 -215 3057 3015 939 118 0 0 chr17 29740676 29740803 -55697677 - FLAM_C SINE Alu -5 128 2 297 342 61 56 chr17 29740803 29740989 -55697491 - L2 LINE L2 -257 3015 2826 2102 65 0 14 chr17 29742583 29742860 -55695620 + AluY SINE Alu 39 311 0 269 246 59 55 chr17 29743357 29743543 -55694937 - MIR SINE MIR -62 146 12 1097 265 168 34 chr17 29744299 29744430 -55694050 + MER21B LTR ERV1 137 249 -614 1599 171 3 17 chr17 29744430 29744722 -55693758 - AluJo SINE Alu -24 288 1 1097 265 168 34 chr17 29744722 29745144 -55693336 + MER21B LTR ERV1 249 764 -99 1797 132 0 69 chr17 29746467 29746785 -55691695 - AluJb SINE Alu -16 296 1 1839 151 0 13 chr17 29746967 29747272 -55691208 + AluJb SINE Alu 1 301 -11 266 241 0 76 chr17 29747329 29747408 -55691072 - MER81 DNA DNA -4 110 38 300 252 135 45 chr17 29748197 29748308 -55690172 + L1ME3A LINE L1 6044 6164 -6 339 267 19 9 chr17 29748438 29748543 -55689937 - L1ME LINE L1 -302 5819 5714 448 295 28 93 chr17 29748601 29748968 -55689512 + L2 LINE L2 2460 2759 -554 2437 59 0 7 chr17 29748968 29749274 -55689206 + AluY SINE Alu 1 304 -7 448 295 28 93 chr17 29749274 29749642 -55688838 + L2 LINE L2 2759 3149 -164 2253 91 0 7 chr17 29749773 29750082 -55688398 - AluSx SINE Alu -5 307 1 501 271 15 0 chr17 29750375 29750508 -55687972 + L2 LINE L2 3167 3301 -12 641 162 17 8 chr17 29750538 29750643 -55687837 + AluSp/q SINE Alu 188 296 -17 180 0 0 0 chr17 29750643 29750663 -55687817 + (CAT)n Simple_repeat Simple_repeat 2 21 0 641 162 17 8 chr17 29750663 29750674 -55687806 + AluSp/q SINE Alu 296 305 -8 923 148 13 13 chr17 29750675 29750830 -55687650 - FRAM SINE Alu -22 154 1 207 100 0 0 chr17 29750901 29750931 -55687549 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 204 314 0 0 chr17 29750931 29750982 -55687498 - L2 LINE L2 -13 3300 3250 2163 112 0 6 chr17 29752366 29752678 -55685802 + AluSx SINE Alu 1 310 -2 2189 99 0 16 chr17 29752727 29753040 -55685440 + AluSc SINE Alu 1 308 -1 467 208 39 15 chr17 29753192 29753322 -55685158 - MIR SINE MIR -56 206 74 22 0 0 0 chr17 29753341 29753363 -55685117 + AT_rich Low_complexity Low_complexity 1 22 0 224 240 27 13 chr17 29753628 29753703 -55684777 - MIR SINE MIR -55 153 78 181 268 18 36 chr17 29754204 29754260 -55684220 + MIR SINE MIR 91 145 -63 945 252 45 8 chr17 29754337 29754579 -55683901 - MIR SINE MIR 0 262 12 826 117 36 36 chr17 29754734 29754751 -55683729 + AluSc SINE Alu 115 131 -178 2256 97 0 3 chr17 29754751 29755050 -55683430 + AluSx SINE Alu 1 298 -14 826 117 36 36 chr17 29755050 29755169 -55683311 + AluSc SINE Alu 130 251 -58 413 341 91 19 chr17 29755281 29755589 -55682891 + L1ME1 LINE L1 1 330 -6210 327 289 64 39 chr17 29755773 29755929 -55682551 + L1ME1 LINE L1 776 935 -5595 352 258 11 21 chr17 29755978 29756071 -55682409 + L1ME1 LINE L1 911 1002 -5541 804 209 11 23 chr17 29756096 29756273 -55682207 + FRAM SINE Alu 1 40 0 929 255 47 52 chr17 29756285 29756408 -55682072 + L1ME1 LINE L1 1026 1148 -5395 2419 63 0 0 chr17 29756408 29756709 -55681771 + AluY SINE Alu 1 301 -10 929 255 47 52 chr17 29756709 29757009 -55681471 + L1ME1 LINE L1 1148 1447 -5096 * 2344 235 53 47 chr17 29757003 29757452 -55681028 + L1ME1 LINE L1 2757 3202 -3338 1725 141 25 7 chr17 29757452 29757728 -55680752 - AluJo SINE Alu -30 282 2 2344 235 53 47 chr17 29757728 29757767 -55680713 + L1ME1 LINE L1 3202 3239 -3301 2206 95 0 13 chr17 29757767 29758071 -55680409 + AluSq SINE Alu 2 301 -12 2344 235 53 47 chr17 29758071 29758112 -55680368 + L1ME1 LINE L1 3239 3278 -3262 1843 149 10 16 chr17 29758112 29758387 -55680093 + AluSx SINE Alu 5 279 -33 186 43 0 0 chr17 29758387 29758410 -55680070 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1843 149 10 16 chr17 29758410 29758443 -55680037 + AluSx SINE Alu 279 311 -1 2344 235 53 47 chr17 29758443 29758523 -55679957 + L1ME1 LINE L1 3278 3356 -3184 2107 96 3 3 chr17 29758523 29758825 -55679655 - AluSp SINE Alu 0 302 1 2344 235 53 47 chr17 29758825 29759094 -55679386 + L1ME1 LINE L1 3356 3622 -2918 1795 154 3 10 chr17 29759094 29759392 -55679088 + AluJo SINE Alu 1 296 -16 2344 235 53 47 chr17 29759392 29759778 -55678702 + L1ME1 LINE L1 3622 4090 -2450 2533 59 0 0 chr17 29759778 29760085 -55678395 + AluY SINE Alu 2 308 -3 2344 235 53 47 chr17 29760085 29760383 -55678097 + L1ME1 LINE L1 4090 4385 -2155 724 256 214 40 chr17 29760391 29760817 -55677663 + L1ME1 LINE L1 6041 6543 -16 2048 128 0 13 chr17 29760859 29761165 -55677315 + AluJb SINE Alu 1 302 -10 2270 80 0 0 chr17 29761208 29761523 -55676957 - AluSq SINE Alu 0 315 1 1682 157 38 3 chr17 29761525 29761812 -55676668 - AluJb SINE Alu -15 297 1 469 227 36 0 chr17 29761813 29761923 -55676557 + Charlie8 DNA MER1_type 130 243 -2174 251 220 305 1 chr17 29763449 29763544 -55674936 - MER45 DNA AcHobo -62 116 1 307 231 56 13 chr17 29763561 29763669 -55674811 + MIR SINE MIR 75 139 -69 473 261 7 39 chr17 29763899 29764052 -55674428 + MIR3 SINE MIR 55 202 -6 215 187 27 80 chr17 29764213 29764288 -55674192 + MIR SINE MIR 83 153 -109 575 270 26 0 chr17 29764410 29764562 -55673918 + MLT1L LTR MaLR 120 275 -340 421 338 20 0 chr17 29764655 29764803 -55673677 + MLT1L LTR MaLR 443 593 -22 339 276 0 33 chr17 29765429 29765559 -55672921 + MIR SINE MIR 27 149 -59 241 283 0 0 chr17 29766722 29766782 -55671698 + MIR SINE MIR 107 166 -96 263 304 0 0 chr17 29767052 29767121 -55671359 - MIR SINE MIR -109 153 85 185 385 57 8 chr17 29768111 29768233 -55670247 - MIR SINE MIR -75 187 60 2182 78 0 3 chr17 29768237 29768548 -55669932 - AluY SINE Alu 0 310 1 183 245 0 19 chr17 29768686 29768739 -55669741 + MER5B DNA MER1_type 103 154 -24 1257 112 0 0 chr17 29769028 29769198 -55669282 - AluSx SINE Alu -142 170 1 201 39 0 0 chr17 29769283 29769309 -55669171 + (CAT)n Simple_repeat Simple_repeat 3 28 0 358 378 79 4 chr17 29769458 29769699 -55668781 - MIR SINE MIR -2 260 2 388 242 139 30 chr17 29770048 29770213 -55668267 + MLT1K LTR MaLR 7 189 -399 418 343 18 69 chr17 29770218 29770495 -55667985 + L1M4 LINE L1 3854 4116 -2030 556 335 22 33 chr17 29770970 29771242 -55667238 + L1M4 LINE L1 4182 4450 -1696 1626 270 109 12 chr17 29771509 29772220 -55666260 + L1MC4 LINE L1 6990 7904 -138 1924 129 23 13 chr17 29772281 29772590 -55665890 + AluJo SINE Alu 1 312 0 325 248 115 76 chr17 29772703 29772860 -55665620 + L1MC/D LINE L1 2350 2512 -4028 291 279 48 36 chr17 29772869 29773120 -55665360 + L1MC/D LINE L1 5662 5915 -2521 1962 78 0 11 chr17 29773990 29774258 -55664222 + AluSx SINE Alu 33 297 -15 678 210 21 7 chr17 29775100 29775243 -55663237 - MIR SINE MIR -105 157 13 335 219 68 3 chr17 29775864 29775964 -55662516 + MIR SINE MIR 17 122 -86 2285 94 0 7 chr17 29776008 29776317 -55662163 + AluSc SINE Alu 1 307 -2 249 281 73 0 chr17 29776590 29776672 -55661808 - MIR SINE MIR -61 201 114 2255 63 0 14 chr17 29776704 29777048 -55661432 + AluY SINE Alu 1 340 0 368 71 18 0 chr17 29777396 29777452 -55661028 + (TGGA)n Simple_repeat Simple_repeat 3 59 0 207 216 0 48 chr17 29777516 29777641 -55660839 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 333 271 70 23 chr17 29777676 29777805 -55660675 + L3 LINE CR1 1313 1447 -130 2212 83 0 13 chr17 29778339 29778641 -55659839 - AluY SINE Alu -13 298 1 638 298 158 12 chr17 29778960 29779565 -55658915 + L2 LINE L2 2535 3308 -5 2242 92 3 0 chr17 29779570 29779865 -55658615 - AluSx SINE Alu -16 296 1 2209 112 0 6 chr17 29779884 29780198 -55658282 - AluSx SINE Alu 0 312 1 1878 106 42 7 chr17 29781289 29781572 -55656908 + AluSx SINE Alu 1 293 -19 1011 169 6 0 chr17 29781582 29781754 -55656726 + FRAM SINE Alu 1 165 -11 609 252 7 0 chr17 29783126 29783261 -55655219 - MIR SINE MIR -24 238 103 2034 143 0 6 chr17 29783410 29783724 -55654756 - AluJb SINE Alu 0 312 1 3077 202 11 11 chr17 29783804 29784444 -55654036 - L1MC3 LINE L1 -166 7619 6980 21 0 0 0 chr17 29784672 29784693 -55653787 + GC_rich Low_complexity Low_complexity 1 21 0 468 323 97 9 chr17 29784823 29785049 -55653431 + L3 LINE CR1 605 850 -727 461 322 68 6 chr17 29785077 29785254 -55653226 + L1MC4a LINE L1 7463 7650 -158 249 270 27 9 chr17 29785259 29785370 -55653110 + L1ME4a LINE L1 5830 5942 -179 362 310 110 71 chr17 29785552 29786071 -55652409 + L3 LINE CR1 864 1402 -175 363 189 81 45 chr17 29787865 29787976 -55650504 - MIR SINE MIR -132 130 16 259 349 46 31 chr17 29788495 29788690 -55649790 + L2 LINE L2 2989 3186 -86 260 305 86 8 chr17 29789144 29789272 -55649208 + MIR SINE MIR 75 212 -50 184 234 64 0 chr17 29790433 29790480 -55648000 + L2 LINE L2 2702 2751 -563 199 208 65 78 chr17 29790775 29790852 -55647628 + MIR SINE MIR 166 241 -21 238 289 41 50 chr17 29790937 29791058 -55647422 + L2 LINE L2 3153 3272 0 1266 222 130 75 chr17 29791064 29791119 -55647361 + MLT1D LTR MaLR 3 54 -451 1925 120 97 3 chr17 29791119 29791427 -55647053 - MER1B DNA MER1_type 0 337 1 1266 222 130 75 chr17 29791427 29791484 -55646996 + MLT1D LTR MaLR 54 106 -399 1919 155 0 7 chr17 29791484 29791794 -55646686 + AluJb SINE Alu 1 308 -4 1266 222 130 75 chr17 29791794 29792157 -55646323 + MLT1D LTR MaLR 106 505 0 201 348 51 34 chr17 29792196 29792314 -55646166 + MIR SINE MIR 20 139 -123 186 244 0 0 chr17 29792358 29792399 -55646081 + L2 LINE L2 3207 3247 -25 241 111 0 0 chr17 29793166 29793202 -55645278 - MIR SINE MIR -11 251 216 289 146 250 0 chr17 29793262 29793358 -55645122 + L2 LINE L2 2934 3053 -219 1989 111 13 17 chr17 29793664 29793822 -55644658 - AluSq SINE Alu -16 297 139 2284 93 3 3 chr17 29793822 29794133 -55644347 - AluSp SINE Alu -2 311 1 1989 111 13 17 chr17 29794133 29794272 -55644208 - AluSq SINE Alu -174 139 1 251 241 191 80 chr17 29794705 29795051 -55643429 - L1ME4a LINE L1 -117 6004 5611 2309 81 3 7 chr17 29795051 29795358 -55643122 - AluSp SINE Alu -7 306 1 251 241 191 80 chr17 29795358 29795388 -55643092 - L1ME4a LINE L1 -510 5611 5586 292 254 34 67 chr17 29795460 29795669 -55642811 - L1ME4a LINE L1 -2338 5470 5269 1855 133 28 0 chr17 29795785 29796071 -55642409 - AluSx SINE Alu -12 300 7 317 291 71 7 chr17 29796107 29796248 -55642232 + MLT1I LTR MaLR 1 150 -259 380 275 102 18 chr17 29796269 29796436 -55642044 + MER3 DNA MER1_type 29 209 0 * 817 168 103 0 chr17 29796290 29796445 -55642035 - MER3 DNA MER1_type 0 209 39 378 233 37 132 chr17 29796623 29796812 -55641668 + MLT1I LTR MaLR 197 367 -42 423 304 8 0 chr17 29797042 29797167 -55641313 - L1ME4a LINE L1 -1537 4609 4484 2369 82 7 0 chr17 29798112 29798415 -55640065 - AluSp SINE Alu -8 305 1 2045 63 12 0 chr17 29798562 29798825 -55639655 - AluY SINE Alu -9 302 45 1917 133 48 0 chr17 29799673 29799967 -55638513 - AluSx SINE Alu -4 308 1 195 280 20 0 chr17 29800734 29800784 -55637696 + MER5A DNA MER1_type 107 157 -32 26 0 0 0 chr17 29804030 29804056 -55634424 + AT_rich Low_complexity Low_complexity 1 26 0 1912 166 45 0 chr17 29805112 29805444 -55633036 - MER7A DNA MER2_type 0 346 2 1804 182 0 0 chr17 29806041 29806327 -55632153 - AluJo SINE Alu -22 290 5 720 198 77 16 chr17 29806441 29806623 -55631857 + L1ME3A LINE L1 5969 6161 -9 198 0 0 0 chr17 29807410 29807432 -55631048 + (CTAAT)n Simple_repeat Simple_repeat 5 26 0 520 110 81 88 chr17 29808627 29808763 -55629717 + L1ME4a LINE L1 5959 6093 -28 226 283 9 94 chr17 29809779 29809885 -55628595 + L2 LINE L2 3116 3212 -60 2119 108 3 10 chr17 29810637 29810925 -55627555 + AluSx SINE Alu 12 297 -15 580 147 0 11 chr17 29811093 29811344 -55627136 - AluJb SINE Alu -9 303 1 23 92 0 0 chr17 29812055 29812120 -55626360 + AT_rich Low_complexity Low_complexity 1 65 0 763 187 0 8 chr17 29812322 29812456 -55626024 - FLAM_A SINE Alu 0 133 1 2234 107 0 3 chr17 29812830 29813130 -55625350 + AluSg SINE Alu 1 299 -11 1694 159 72 3 chr17 29813754 29814044 -55624436 - AluJb SINE Alu -2 310 1 2111 128 0 0 chr17 29815020 29815325 -55623155 + AluSx SINE Alu 1 305 -7 2421 77 3 0 chr17 29815325 29815623 -55622857 + AluY SINE Alu 1 299 -12 634 247 60 22 chr17 29816858 29817040 -55621440 - MER5A DNA MER1_type 0 189 1 273 119 0 0 chr17 29817935 29817977 -55620503 + (T)n Simple_repeat Simple_repeat 1 42 0 188 309 124 0 chr17 29819110 29819207 -55619273 - L2 LINE L2 -5 3308 3200 2349 75 0 0 chr17 29819301 29819607 -55618873 + AluSc SINE Alu 1 306 0 257 145 113 0 chr17 29820692 29820754 -55617726 + L1ME4a LINE L1 6028 6096 -25 1936 140 7 3 chr17 29823199 29823492 -55614988 - AluJb SINE Alu -18 294 1 267 299 49 83 chr17 29823648 29823792 -55614688 - MIR3 SINE MIR -48 160 22 454 354 102 44 chr17 29823848 29824223 -55614257 + L2 LINE L2 2142 2494 -820 482 226 122 0 chr17 29824223 29824338 -55614142 - FLAM_A SINE Alu -4 129 1 454 354 102 44 chr17 29824338 29824641 -55613839 + L2 LINE L2 2494 2859 -455 1565 172 52 0 chr17 29825421 29825709 -55612771 - AluJb SINE Alu 0 302 1 2254 117 0 3 chr17 29825850 29826159 -55612321 + AluSx SINE Alu 1 308 -4 28 29 0 0 chr17 29826586 29826621 -55611859 + AT_rich Low_complexity Low_complexity 1 35 0 225 292 31 0 chr17 29826931 29826996 -55611484 - LTR6A LTR ERV1 -320 244 178 904 86 111 94 chr17 29827046 29827080 -55611400 - L1MA8 LINE L1 -4 6287 6255 1531 127 9 0 chr17 29827080 29827308 -55611172 + MER30 DNA MER1_type 1 230 0 904 86 111 94 chr17 29827308 29827343 -55611137 - L1MA8 LINE L1 -36 6255 6222 2453 77 3 6 chr17 29827343 29827656 -55610824 + AluSx SINE Alu 1 312 0 904 86 111 94 chr17 29827656 29827819 -55610661 - L1MA8 LINE L1 -69 6222 6050 206 256 190 50 chr17 29829048 29829169 -55609311 - MIR SINE MIR -46 216 79 239 0 32 0 chr17 29829940 29829971 -55608509 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 215 222 19 0 chr17 29830642 29830696 -55607784 + GA-rich Low_complexity Low_complexity 2 56 0 198 0 0 0 chr17 29832219 29832241 -55606239 + (A)n Simple_repeat Simple_repeat 1 22 0 1542 162 0 0 chr17 29833914 29834155 -55604325 - AluSx SINE Alu -8 304 64 807 135 0 0 chr17 29834157 29834268 -55604212 - AluSq/x SINE Alu -202 111 1 1970 146 3 7 chr17 29835085 29835387 -55603093 - AluJb SINE Alu -11 301 1 1958 170 0 0 chr17 29835498 29835798 -55602682 - AluJb SINE Alu -12 300 1 1847 145 35 0 chr17 29836463 29836745 -55601735 - AluSx SINE Alu -20 292 1 374 265 148 19 chr17 29836820 29836982 -55601498 + MIR3 SINE MIR 21 203 -5 200 214 179 0 chr17 29837273 29837329 -55601151 - MIR SINE MIR -115 147 82 237 132 0 0 chr17 29837334 29837372 -55601108 + (CA)n Simple_repeat Simple_repeat 2 39 0 339 25 0 0 chr17 29837440 29837480 -55601000 + (CA)n Simple_repeat Simple_repeat 2 41 0 235 161 36 0 chr17 29837482 29837538 -55600942 + (TA)n Simple_repeat Simple_repeat 1 58 0 1891 149 7 0 chr17 29837543 29837832 -55600648 - AluJb SINE Alu -21 291 1 263 246 123 44 chr17 29837996 29838110 -55600370 + MIR SINE MIR 124 246 -16 183 42 0 0 chr17 29838203 29838227 -55600253 + (T)n Simple_repeat Simple_repeat 1 24 0 399 278 70 9 chr17 29839357 29839472 -55599008 + MIR SINE MIR 25 146 -116 558 233 45 74 chr17 29839797 29839999 -55598481 + L2 LINE L2 3101 3296 -17 21 57 0 0 chr17 29840573 29840608 -55597872 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 29841092 29841120 -55597360 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr17 29842457 29842481 -55595999 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr17 29842787 29842813 -55595667 + AT_rich Low_complexity Low_complexity 1 26 0 1896 138 0 48 chr17 29843086 29843397 -55595083 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr17 29843728 29843749 -55594731 + AT_rich Low_complexity Low_complexity 1 21 0 353 205 8 0 chr17 29843783 29843910 -55594570 + (TA)n Simple_repeat Simple_repeat 1 128 0 277 330 77 0 chr17 29844020 29844111 -55594369 + L2 LINE L2 3161 3258 -14 2311 49 3 39 chr17 29844875 29845181 -55593299 - AluY SINE Alu -16 295 1 752 121 7 93 chr17 29845313 29845503 -55592977 - L1MB3 LINE L1 0 6171 6025 381 171 67 9 chr17 29845513 29845618 -55592862 - L1MB3 LINE L1 -302 5819 5709 772 195 97 26 chr17 29845619 29845845 -55592635 + L1ME3 LINE L1 5921 6162 0 373 324 7 8 chr17 29845881 29846024 -55592456 - L1MB3 LINE L1 -458 5663 5527 523 173 127 9 chr17 29846115 29846225 -55592255 - FLAM_A SINE Alu -10 123 1 294 95 0 0 chr17 29846328 29846370 -55592110 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 2243 92 0 0 chr17 29846370 29846652 -55591828 - AluSg SINE Alu -28 282 1 821 126 6 120 chr17 29846896 29847079 -55591401 - AluJb SINE Alu -11 301 140 307 267 97 68 chr17 29847268 29847474 -55591006 - L1MB3 LINE L1 -1379 4767 4556 1003 126 0 50 chr17 29849875 29850034 -55588446 - FAM SINE Alu -13 172 22 418 237 105 13 chr17 29850567 29850719 -55587761 - MIR SINE MIR -94 168 3 21 0 0 0 chr17 29851758 29851779 -55586701 + AT_rich Low_complexity Low_complexity 1 21 0 1760 107 29 0 chr17 29851810 29852054 -55586426 + AluSq SINE Alu 1 251 -62 395 131 4 0 chr17 29852066 29852151 -55586329 + AluS SINE Alu 229 306 0 2222 81 7 0 chr17 29852412 29852697 -55585783 - AluSq SINE Alu -19 294 8 685 294 105 47 chr17 29853567 29854016 -55584464 + MLT1K LTR MaLR 112 586 -2 969 104 129 136 chr17 29854174 29854208 -55584272 + L1MA4 LINE L1 6018 6051 -249 1964 150 13 0 chr17 29854208 29854508 -55583972 + AluSx SINE Alu 1 304 -8 969 104 129 136 chr17 29854508 29854703 -55583777 + L1MA4 LINE L1 6051 6247 -53 2228 104 10 0 chr17 29854703 29855011 -55583469 + AluSx SINE Alu 1 311 -1 969 104 129 136 chr17 29855011 29855060 -55583420 + L1MA4 LINE L1 6247 6295 -5 414 303 15 8 chr17 29855529 29855661 -55582819 + MER5A DNA MER1_type 7 139 -50 1721 123 0 61 chr17 29855678 29855955 -55582525 - AluJb SINE Alu -52 260 1 641 226 0 24 chr17 29856406 29856530 -55581950 - FLAM_A SINE Alu -11 122 2 1892 137 0 69 chr17 29856530 29856865 -55581615 - AluSx SINE Alu 0 312 1 333 0 0 0 chr17 29856932 29856969 -55581511 + (TG)n Simple_repeat Simple_repeat 2 38 0 192 313 0 60 chr17 29858612 29858679 -55579801 + MER5A DNA MER1_type 24 86 -103 24 0 0 0 chr17 29858704 29858728 -55579752 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 29859669 29859691 -55578789 + AT_rich Low_complexity Low_complexity 1 22 0 342 0 0 0 chr17 29861657 29861695 -55576785 + (TG)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr17 29861934 29861956 -55576524 + AT_rich Low_complexity Low_complexity 1 22 0 549 247 41 41 chr17 29862001 29862147 -55576333 - MER5B DNA MER1_type -1 177 32 888 190 155 20 chr17 29862917 29863117 -55575363 + AluJo SINE Alu 54 280 -32 283 272 136 0 chr17 29863321 29863424 -55575056 - MIR SINE MIR -22 240 124 1820 108 34 3 chr17 29863509 29863805 -55574675 - L1MA1 LINE L1 0 6302 5998 3399 90 17 0 chr17 29863967 29864444 -55574036 + L1MA2 LINE L1 5358 5842 -462 363 280 179 12 chr17 29864490 29864658 -55573822 - MIR SINE MIR -3 259 64 24 0 0 0 chr17 29865120 29865144 -55573336 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr17 29865304 29865332 -55573148 + (CA)n Simple_repeat Simple_repeat 1 28 0 2204 104 0 7 chr17 29865334 29865633 -55572847 - AluSx SINE Alu -15 297 1 21 57 0 0 chr17 29865932 29865967 -55572513 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr17 29866423 29866446 -55572034 + AT_rich Low_complexity Low_complexity 1 23 0 2134 98 3 30 chr17 29866520 29866825 -55571655 - AluSx SINE Alu -13 299 3 301 347 50 0 chr17 29867254 29867375 -55571105 + MIR SINE MIR 20 146 -116 191 246 72 43 chr17 29867465 29867534 -55570946 - L3b LINE CR1 -225 1358 1288 1900 152 0 19 chr17 29867802 29868117 -55570363 + AluJb SINE Alu 1 309 -3 21 82 0 0 chr17 29868158 29868207 -55570273 + AT_rich Low_complexity Low_complexity 1 49 0 480 356 54 4 chr17 29869852 29870091 -55568389 + MIR SINE MIR 2 252 -10 2122 123 7 10 chr17 29870612 29870913 -55567567 + AluSx SINE Alu 1 300 -12 330 318 8 32 chr17 29871374 29871500 -55566980 - MIR3 SINE MIR -43 165 43 1939 132 21 0 chr17 29871734 29872023 -55566457 + AluSx SINE Alu 1 295 -17 216 301 52 46 chr17 29872031 29872052 -55566428 + L2 LINE L2 3155 3174 -139 829 173 0 0 chr17 29872052 29872185 -55566295 - FLAM_C SINE Alu 0 133 1 216 301 52 46 chr17 29872185 29872316 -55566164 + L2 LINE L2 3174 3308 -5 203 171 0 0 chr17 29872621 29872662 -55565818 + (TA)n Simple_repeat Simple_repeat 1 41 0 2136 99 0 17 chr17 29876201 29876494 -55561986 - AluSg SINE Alu -22 288 1 255 333 21 42 chr17 29877237 29877333 -55561147 - MIR3 SINE MIR -22 186 93 2220 260 95 41 chr17 29877562 29878854 -55559626 + L1MC4a LINE L1 4757 5391 -755 807 40 0 0 chr17 29879761 29879861 -55558619 - L1PA3 LINE L1 0 6155 6056 21 0 0 0 chr17 29881331 29881352 -55557128 + AT_rich Low_complexity Low_complexity 1 21 0 2419 100 0 0 chr17 29885847 29886157 -55552323 - AluSq SINE Alu 0 313 4 893 223 123 24 chr17 29886420 29886631 -55551849 - MER8 DNA MER2_type -1 238 7 226 203 25 76 chr17 29886786 29886865 -55551615 - L1MC4 LINE L1 -1341 6701 6627 544 258 55 6 chr17 29886890 29887053 -55551427 + MIR SINE MIR 60 230 -32 338 301 119 28 chr17 29887448 29887624 -55550856 + L1ME LINE L1 3981 4172 -1974 180 77 0 0 chr17 29887777 29887803 -55550677 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 342 0 0 0 chr17 29888011 29888049 -55550431 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2162 115 0 0 chr17 29888052 29888331 -55550149 - AluSx SINE Alu -33 279 1 522 222 243 0 chr17 29888434 29888628 -55549852 + MIR SINE MIR 18 258 -4 319 286 171 24 chr17 29888969 29889221 -55549259 + L1ME LINE L1 5296 5584 -537 190 344 94 47 chr17 29889686 29889898 -55548582 + L2 LINE L2 2740 2961 -353 2055 123 26 23 chr17 29890226 29890536 -55547944 + AluSq SINE Alu 1 311 -2 232 132 19 19 chr17 29890903 29890956 -55547524 + T-rich Low_complexity Low_complexity 5 57 0 2160 8 0 8 chr17 29890958 29891206 -55547274 - L1PA3 LINE L1 0 6155 5910 1458 160 86 4 chr17 29891218 29891474 -55547006 + AluJb SINE Alu 3 279 -33 342 0 0 0 chr17 29891476 29891514 -55546966 + (CA)n Simple_repeat Simple_repeat 1 38 0 210 218 181 75 chr17 29891648 29891781 -55546699 + MIR SINE MIR 66 212 -50 2065 118 20 0 chr17 29892668 29892965 -55545515 + AluSx SINE Alu 1 303 -9 446 320 93 0 chr17 29893106 29893233 -55545247 + MARNA DNA Mariner 88 236 -350 1311 179 132 12 chr17 29893233 29893490 -55544990 - AluJb SINE Alu -23 289 2 446 320 93 0 chr17 29893490 29893534 -55544946 + MARNA DNA Mariner 236 275 -311 548 259 60 22 chr17 29893562 29893747 -55544733 + MARNA DNA Mariner 347 538 -48 1133 154 0 11 chr17 29893753 29893928 -55544552 - AluSg/x SINE Alu -5 307 135 2107 110 7 0 chr17 29893928 29894218 -55544262 - AluSx SINE Alu -20 292 1 2043 136 0 29 chr17 29894334 29894473 -55544007 + AluSq SINE Alu 1 142 -171 2187 131 0 6 chr17 29894473 29894787 -55543693 + AluSx SINE Alu 1 312 0 2043 136 0 29 chr17 29894787 29894963 -55543517 + AluSq SINE Alu 142 307 -6 1673 128 15 119 chr17 29895280 29895607 -55542873 + AluJo SINE Alu 11 303 -9 2561 50 0 0 chr17 29895620 29895920 -55542560 - AluY SINE Alu -9 302 3 1060 180 19 5 chr17 29896116 29896327 -55542153 + L1MB7 LINE L1 5478 5691 -493 1769 137 26 32 chr17 29896335 29896658 -55541822 + L1MB7 LINE L1 5789 6111 -73 2416 77 0 0 chr17 29896658 29896957 -55541523 - AluY SINE Alu -12 299 1 1769 137 26 32 chr17 29896957 29896977 -55541503 + L1MB7 LINE L1 6111 6130 -54 1935 153 0 13 chr17 29896982 29897282 -55541198 - AluJb SINE Alu -14 298 3 225 191 132 0 chr17 29898090 29898158 -55540322 - MER113 DNA MER1_type? -318 203 127 558 217 94 90 chr17 29898421 29898517 -55539963 + MER58C DNA MER1_type 1 95 -2325 2193 75 14 31 chr17 29898517 29898811 -55539669 - AluSg SINE Alu -6 304 16 558 217 94 90 chr17 29898811 29898926 -55539554 + MER58C DNA MER1_type 95 213 -2 544 140 70 35 chr17 29899444 29899558 -55538922 - FLAM_A SINE Alu -2 140 23 261 167 0 0 chr17 29899705 29899747 -55538733 - 5S rRNA rRNA -79 42 1 1697 151 0 41 chr17 29899800 29900092 -55538388 - AluJo SINE Alu -23 289 10 2471 90 0 0 chr17 29900143 29900453 -55538027 + AluSq SINE Alu 1 310 -3 252 0 0 0 chr17 29900526 29900554 -55537926 + (A)n Simple_repeat Simple_repeat 1 28 0 204 226 0 0 chr17 29900618 29900671 -55537809 + A-rich Low_complexity Low_complexity 1 53 0 801 173 77 13 chr17 29900916 29901072 -55537408 - FRAM SINE Alu -17 159 1 230 245 0 0 chr17 29901100 29901149 -55537331 - LTR33 LTR ERVL 0 521 473 742 316 76 6 chr17 29901214 29901543 -55536937 - LTR33 LTR ERVL -167 354 3 445 318 37 21 chr17 29901549 29901776 -55536704 - MLT1J2 LTR MaLR 0 450 142 2371 163 21 9 chr17 29901776 29902205 -55536275 + Tigger2a DNA MER2_type 1 434 0 445 318 37 21 chr17 29902205 29902311 -55536169 - MLT1J2 LTR MaLR -308 142 39 642 233 37 49 chr17 29902339 29902584 -55535896 - MER46C DNA MER2_type -92 246 5 2321 83 0 0 chr17 29902813 29903102 -55535378 - AluY SINE Alu -9 302 14 1862 142 52 16 chr17 29903382 29903749 -55534731 - Tigger7 DNA MER2_type 0 2587 2208 581 180 0 0 chr17 29903756 29903856 -55534624 - Tigger7 DNA MER2_type -632 101 2 275 347 139 0 chr17 29905547 29905691 -55532789 + MIR3 SINE MIR 30 193 -15 213 39 0 0 chr17 29905696 29905722 -55532758 + (TTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr17 29906241 29906262 -55532218 + AT_rich Low_complexity Low_complexity 1 21 0 2229 117 10 3 chr17 29907260 29907567 -55530913 - AluSq SINE Alu -4 309 1 21 0 0 0 chr17 29907567 29907588 -55530892 + AT_rich Low_complexity Low_complexity 1 21 0 304 255 128 43 chr17 29908026 29908167 -55530313 - MER5A DNA MER1_type 0 189 37 243 327 94 38 chr17 29908027 29908186 -55530294 + MER5A DNA MER1_type 14 181 -8 * 307 250 73 10 chr17 29908216 29908312 -55530168 + MIR SINE MIR 160 261 -1 1903 165 0 9 chr17 29908395 29908710 -55529770 - AluJb SINE Alu 0 312 1 1626 260 62 42 chr17 29908992 29909538 -55528942 + MLT1K LTR MaLR 10 566 -22 343 305 16 23 chr17 29909560 29909688 -55528792 - L1MC/D LINE L1 -2009 5799 5673 1963 153 0 23 chr17 29910031 29910339 -55528141 + AluJo SINE Alu 1 301 -11 2289 91 3 3 chr17 29910394 29910690 -55527790 - AluSc SINE Alu -13 296 1 248 333 80 28 chr17 29911123 29911336 -55527144 - L2 LINE L2 -787 2527 2304 2146 122 3 3 chr17 29911805 29912101 -55526379 + AluSq SINE Alu 1 296 -17 197 329 27 14 chr17 29912880 29912953 -55525527 - MIR SINE MIR -116 92 19 258 256 78 0 chr17 29913930 29914020 -55524460 + L1ME LINE L1 5563 5659 -462 589 263 16 43 chr17 29914341 29914596 -55523884 - L1MEd LINE L1 -4862 1257 1010 2246 93 0 39 chr17 29914610 29914920 -55523560 - AluSq SINE Alu -15 298 1 23 0 0 0 chr17 29915206 29915229 -55523251 + AT_rich Low_complexity Low_complexity 1 23 0 264 318 0 0 chr17 29915313 29915401 -55523079 - MIR SINE MIR 0 262 175 200 140 0 35 chr17 29915524 29915581 -55522899 + (TTTTTA)n Simple_repeat Simple_repeat 4 58 0 1686 168 52 3 chr17 29915588 29915874 -55522606 - AluJo SINE Alu -8 304 5 743 102 0 29 chr17 29915875 29916012 -55522468 + (TCTA)n Simple_repeat Simple_repeat 1 133 0 724 203 0 0 chr17 29916013 29916131 -55522349 - FLAM_C SINE Alu -25 118 1 199 350 0 0 chr17 29916817 29916898 -55521582 + MIR SINE MIR 71 150 -69 21 0 0 0 chr17 29917010 29917031 -55521449 + AT_rich Low_complexity Low_complexity 1 21 0 2235 111 0 7 chr17 29917765 29918071 -55520409 - AluSq SINE Alu -9 304 1 337 308 131 8 chr17 29918903 29919033 -55519447 - MIR3 SINE MIR -25 183 38 228 248 114 38 chr17 29919272 29919377 -55519103 - MIR SINE MIR -50 212 100 26 0 0 0 chr17 29919706 29919732 -55518748 + AT_rich Low_complexity Low_complexity 1 26 0 28 86 0 0 chr17 29920172 29920242 -55518238 + AT_rich Low_complexity Low_complexity 1 70 0 2050 101 25 4 chr17 29922593 29922897 -55515583 + AluSx SINE Alu 1 310 0 26 30 0 0 chr17 29922974 29923007 -55515473 + AT_rich Low_complexity Low_complexity 1 33 0 396 104 15 0 chr17 29923162 29923229 -55515251 - HY3 scRNA scRNA -4 97 30 21 36 0 0 chr17 29924257 29924285 -55514195 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr17 29924637 29924682 -55513798 + AT_rich Low_complexity Low_complexity 1 45 0 1929 131 25 45 chr17 29924734 29925048 -55513432 - AluJo SINE Alu -4 308 1 22 35 0 0 chr17 29926882 29926911 -55511569 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr17 29927028 29927056 -55511424 + AT_rich Low_complexity Low_complexity 1 28 0 222 118 0 0 chr17 29927157 29927191 -55511289 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 281 292 56 11 chr17 29927196 29927285 -55511195 - L2 LINE L2 -21 3292 3200 2003 129 42 0 chr17 29930213 29930500 -55507980 + AluSx SINE Alu 5 303 -9 2175 106 3 0 chr17 29930829 29931111 -55507369 - AluSp SINE Alu -30 283 1 590 275 172 0 chr17 29931164 29931426 -55507054 - L1ME3A LINE L1 -287 5883 5577 2289 94 3 3 chr17 29931820 29932117 -55506363 - AluSc SINE Alu -12 297 1 416 342 25 13 chr17 29932162 29932320 -55506160 + MIR SINE MIR 14 173 -89 392 301 138 8 chr17 29932415 29932538 -55505942 + L2 LINE L2 3122 3260 -12 255 294 15 0 chr17 29932802 29932870 -55505610 - L2 LINE L2 -8 3305 3237 3627 181 54 14 chr17 29932949 29933671 -55504809 + MER21B LTR ERV1 4 754 -109 20209 120 46 44 chr17 29934130 29935818 -55502662 + L1MA3 LINE L1 16 1699 -5866 264 30 0 0 chr17 29935818 29935851 -55502629 + (CA)n Simple_repeat Simple_repeat 2 34 0 20209 120 46 44 chr17 29935851 29936625 -55501855 + L1MA3 LINE L1 1699 2470 -5095 651 109 0 0 chr17 29936625 29936726 -55501754 + AluSp/q SINE Alu 210 310 -3 20209 120 46 44 chr17 29936726 29937854 -55500626 + L1MA3 LINE L1 2470 3721 -3844 2147 140 0 0 chr17 29937854 29938161 -55500319 + AluSx SINE Alu 1 307 -5 5543 94 29 25 chr17 29938161 29938968 -55499512 + L1MA3 LINE L1 6782 7595 -129 2267 103 0 3 chr17 29938968 29939269 -55499211 + AluSq SINE Alu 1 300 -13 5543 94 29 25 chr17 29939269 29939400 -55499080 + L1MA3 LINE L1 7595 7724 0 3074 193 100 102 chr17 29939428 29940279 -55498201 - L1MCa LINE L1 -2963 3463 2612 2224 97 3 10 chr17 29940279 29940579 -55497901 - AluSc SINE Alu -11 298 1 3074 193 100 102 chr17 29940579 29941130 -55497350 - L1MCa LINE L1 -3814 2612 32 1731 181 10 16 chr17 29941455 29941769 -55496711 + AluSx SINE Alu 1 312 0 255 281 0 0 chr17 29942028 29942085 -55496395 - L2 LINE L2 0 3313 3257 1965 118 0 37 chr17 29942281 29942577 -55495903 + AluSx SINE Alu 1 285 -27 2287 75 16 10 chr17 29944332 29944640 -55493840 - AluY SINE Alu -1 310 1 974 124 31 6 chr17 29944778 29944939 -55493541 + L1MB1 LINE L1 6003 6167 -1 597 282 79 15 chr17 29944944 29945146 -55493334 - L2 LINE L2 -338 2976 2762 249 204 0 19 chr17 29945740 29945794 -55492686 - L2 LINE L2 -3 3269 3217 243 0 0 0 chr17 29946962 29946989 -55491491 + (A)n Simple_repeat Simple_repeat 1 27 0 1778 178 7 3 chr17 29947224 29947528 -55490952 - MER2 DNA MER2_type 0 345 41 936 198 24 51 chr17 29950241 29950583 -55487897 + L1MB8 LINE L1 5845 6161 -22 717 224 63 44 chr17 29951080 29951285 -55487195 + MER3 DNA MER1_type 1 209 0 369 0 0 0 chr17 29952673 29952714 -55485766 + (TG)n Simple_repeat Simple_repeat 2 42 0 557 235 80 19 chr17 29953518 29953680 -55484800 - MIR SINE MIR -50 212 41 1015 233 18 9 chr17 29955934 29956153 -55482327 + MER58A DNA MER1_type 3 223 -1 1492 140 54 29 chr17 29956162 29956477 -55482003 + MER33 DNA MER1_type 1 323 -1 23 68 0 0 chr17 29957049 29957093 -55481387 + AT_rich Low_complexity Low_complexity 1 44 0 30 69 0 0 chr17 29957777 29957835 -55480645 + AT_rich Low_complexity Low_complexity 1 58 0 310 322 110 67 chr17 29958366 29958711 -55479769 - L1ME4a LINE L1 -242 5879 5520 2999 173 93 24 chr17 29958793 29959392 -55479088 + L1MB7 LINE L1 5457 6110 -74 1195 51 0 6 chr17 29959392 29959548 -55478932 + L1PA4 LINE L1 5998 6152 -3 2999 173 93 24 chr17 29959548 29959624 -55478856 + L1MB7 LINE L1 6110 6179 -5 35 0 0 0 chr17 29959624 29959659 -55478821 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 29960052 29960073 -55478407 + AT_rich Low_complexity Low_complexity 1 21 0 658 168 0 181 chr17 29960078 29960162 -55478318 + L1MB8 LINE L1 5982 6001 -177 2179 128 0 0 chr17 29960162 29960474 -55478006 + AluSx SINE Alu 1 312 0 658 168 0 181 chr17 29960474 29960615 -55477865 + L1MB8 LINE L1 6001 6166 -12 1977 91 91 0 chr17 29961076 29961350 -55477130 - AluSx SINE Alu -13 299 1 1939 136 24 0 chr17 29961428 29961722 -55476758 + AluSx SINE Alu 1 301 -11 406 332 108 22 chr17 29962079 29962480 -55476000 - L2 LINE L2 -219 3053 2622 815 219 167 5 chr17 29963415 29963630 -55474850 - MIR SINE MIR 0 262 13 736 180 20 7 chr17 29963750 29963900 -55474580 + FRAM SINE Alu 1 150 -26 538 223 66 6 chr17 29964990 29965156 -55473324 - MER104 DNA MER2_type -3 177 2 4960 124 94 85 chr17 29966059 29966317 -55472163 + Tigger3b DNA MER2_type 2 256 -2772 2092 101 3 7 chr17 29966317 29966604 -55471876 - AluSx SINE Alu -26 286 1 4960 124 94 85 chr17 29966604 29967563 -55470917 + Tigger3b DNA MER2_type 256 1230 -1 261 335 126 62 chr17 29968129 29968418 -55470062 + L3 LINE CR1 839 1153 -424 2072 131 0 10 chr17 29968418 29968730 -55469750 - AluSx SINE Alu -3 309 1 261 335 126 62 chr17 29968730 29968765 -55469715 + L3 LINE CR1 1153 1184 -393 517 305 7 13 chr17 29968773 29968924 -55469556 - L2 LINE L2 -1 3312 3163 186 359 68 34 chr17 29968921 29969038 -55469442 + MIR SINE MIR 21 141 -67 * 1438 160 26 59 chr17 29969083 29969390 -55469090 + AluSx SINE Alu 1 297 -15 459 271 48 32 chr17 29969438 29969626 -55468854 + L3 LINE CR1 1216 1406 -171 1207 155 9 40 chr17 29969814 29970040 -55468440 + MER20 DNA MER1_type 1 219 0 2133 122 0 0 chr17 29970116 29970420 -55468060 - AluSq SINE Alu -7 306 3 270 273 23 11 chr17 29970477 29970565 -55467915 + L2 LINE L2 3162 3250 -22 21 0 0 0 chr17 29972186 29972207 -55466273 + AT_rich Low_complexity Low_complexity 1 21 0 440 187 37 90 chr17 29976350 29976484 -55461996 + MER20B DNA MER1_type 59 185 -598 2021 149 0 0 chr17 29978861 29979163 -55459317 - AluSx SINE Alu -10 302 1 8646 216 59 35 chr17 29979461 29980098 -55458382 + L1MC4a LINE L1 2658 3278 -2868 1853 150 0 14 chr17 29980098 29980384 -55458096 + AluSx SINE Alu 1 282 -30 8646 216 59 35 chr17 29980384 29981670 -55456810 + L1MC4a LINE L1 3278 4661 -1485 2356 73 0 7 chr17 29981670 29981971 -55456509 + AluY SINE Alu 1 299 -12 8646 216 59 35 chr17 29981971 29982626 -55455854 + L1MC4a LINE L1 4661 5299 -847 2726 136 55 103 chr17 29983000 29983632 -55454848 + L1MB3 LINE L1 5572 6173 -10 24 0 0 0 chr17 29984340 29984364 -55454116 + AT_rich Low_complexity Low_complexity 1 24 0 6142 121 39 6 chr17 29984373 29985309 -55453171 - L1MA5A LINE L1 -32 6265 5292 221 0 0 33 chr17 29985309 29985339 -55453141 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6142 121 39 6 chr17 29985339 29985464 -55453016 - L1MA5A LINE L1 -1005 5292 5173 606 175 8 42 chr17 29985537 29985657 -55452823 + FLAM_A SINE Alu 1 116 -17 651 215 128 29 chr17 29985725 29985897 -55452583 - MER5A DNA MER1_type 0 189 1 5396 71 24 12 chr17 29986079 29986836 -55451644 + MER4E LTR ERV1 1 766 0 355 261 73 24 chr17 29987008 29987190 -55451290 + L1P4 LINE L1 5262 5450 -716 1653 228 55 7 chr17 29987297 29987701 -55450779 - L1ME1 LINE L1 -82 6084 5662 919 99 7 0 chr17 29987934 29988076 -55450404 - L1MA9 LINE L1 0 6312 6170 625 335 52 24 chr17 29988109 29988568 -55449912 + L1MC4a LINE L1 5435 5906 -1902 1152 132 11 5 chr17 29988724 29988913 -55449567 - AluSg/x SINE Alu -2 308 119 2328 82 3 3 chr17 29988948 29989251 -55449229 + AluSp SINE Alu 1 303 -10 1286 166 35 35 chr17 29989352 29989636 -55448844 + L1MB7 LINE L1 5885 6168 -16 3504 70 0 0 chr17 29989991 29990435 -55448045 - MLT2A1 LTR ERVL 0 444 1 23060 63 21 8 chr17 29990435 29991515 -55446965 - HERVL-A1 LTR ERVL 0 5654 4590 2236 91 7 0 chr17 29991515 29991812 -55446668 + AluSc SINE Alu 1 299 -10 23060 63 21 8 chr17 29991812 29993681 -55444799 - HERVL-A1 LTR ERVL -1064 4590 2664 7687 60 3 26 chr17 29993676 29994332 -55444148 - HERVL-A1 LTR ERVL -4671 983 356 * 2626 29 7 3 chr17 29994332 29994642 -55443838 - AluY SINE Alu 0 311 1 7687 60 3 26 chr17 29994642 29994991 -55443489 - HERVL-A1 LTR ERVL -5298 356 1 3383 63 16 2 chr17 29994995 29995423 -55443057 - MLT2A1 LTR ERVL -8 436 3 188 362 59 53 chr17 29995527 29995679 -55442801 - L3 LINE CR1 -31 1546 1394 3884 64 8 0 chr17 29997861 29998364 -55440116 - L1P LINE L1 -1598 4548 4042 1481 140 54 29 chr17 29998833 29999148 -55439332 - MER33 DNA MER1_type -1 323 1 1026 233 18 9 chr17 29999157 29999376 -55439104 - MER58A DNA MER1_type -1 223 3 560 235 80 19 chr17 30001630 30001792 -55436688 + MIR SINE MIR 41 212 -50 369 0 0 0 chr17 30002596 30002637 -55435843 + (CA)n Simple_repeat Simple_repeat 2 42 0 715 224 63 44 chr17 30004025 30004230 -55434250 - MER3 DNA MER1_type 0 209 1 937 198 24 51 chr17 30004727 30005069 -55433411 - L1MB8 LINE L1 -22 6161 5845 1764 178 7 3 chr17 30007782 30008086 -55430394 + MER2 DNA MER2_type 41 345 0 234 0 0 0 chr17 30008321 30008347 -55430133 + (T)n Simple_repeat Simple_repeat 1 26 0 247 204 0 19 chr17 30009515 30009569 -55428911 + L2 LINE L2 3217 3269 -3 543 266 90 17 chr17 30010163 30010340 -55428140 + L2 LINE L2 2762 2951 -363 991 128 36 8 chr17 30010341 30010531 -55427949 - L1MB1 LINE L1 -1 6167 6003 2321 75 16 10 chr17 30010669 30010977 -55427503 + AluY SINE Alu 1 310 -1 2002 118 0 37 chr17 30012732 30013028 -55425452 - AluSx SINE Alu -27 285 1 251 281 0 0 chr17 30013224 30013281 -55425199 + L2 LINE L2 3257 3313 0 1691 179 10 16 chr17 30013547 30013854 -55424626 - AluSx SINE Alu -7 305 1 3413 187 101 103 chr17 30014179 30014730 -55423750 + L1MCa LINE L1 32 582 -5844 2209 107 3 3 chr17 30014730 30015030 -55423450 + AluY SINE Alu 1 300 -11 3413 187 101 103 chr17 30015030 30015881 -55422599 + L1MCa LINE L1 582 3463 -2963 5857 94 29 25 chr17 30015909 30016040 -55422440 - L1MA3 LINE L1 0 6305 6176 2248 103 0 3 chr17 30016040 30016341 -55422139 - AluSq SINE Alu -13 300 1 5857 94 29 25 chr17 30016341 30017149 -55421331 - L1MA3 LINE L1 -129 6176 5362 2120 133 0 0 chr17 30017161 30017455 -55421025 - AluSx SINE Alu -18 294 1 21463 120 46 44 chr17 30017455 30018583 -55419897 - L1 LINE L1 -3845 3720 2596 649 109 0 0 chr17 30018583 30018684 -55419796 - AluSp/q SINE Alu -3 310 210 21463 120 46 44 chr17 30018684 30019458 -55419022 - L1 LINE L1 -4969 2596 1825 264 30 0 0 chr17 30019458 30019491 -55418989 + (TG)n Simple_repeat Simple_repeat 2 34 0 21463 120 46 44 chr17 30019491 30021179 -55417301 - L1 LINE L1 -5740 1825 16 3876 181 54 14 chr17 30021638 30022360 -55416120 - MER21B LTR ERV1 -109 754 4 256 294 15 0 chr17 30022439 30022507 -55415973 + L2 LINE L2 3237 3305 -8 392 301 138 8 chr17 30022771 30022894 -55415586 - L2 LINE L2 -12 3260 3122 419 342 25 13 chr17 30022989 30023147 -55415333 - MIR SINE MIR -89 173 14 2270 94 3 3 chr17 30023192 30023489 -55414991 + AluSc SINE Alu 1 297 -12 661 279 172 0 chr17 30023883 30024145 -55414335 + L1ME3A LINE L1 5577 5883 -287 2175 106 3 0 chr17 30024198 30024480 -55414000 + AluSp SINE Alu 1 283 -30 1980 129 42 0 chr17 30024809 30025096 -55413384 - AluSx SINE Alu -9 303 5 276 292 56 11 chr17 30028024 30028113 -55410367 + L2 LINE L2 3200 3292 -21 222 118 0 0 chr17 30028118 30028152 -55410328 + (TGGA)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr17 30028253 30028281 -55410199 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 30028398 30028427 -55410053 + AT_rich Low_complexity Low_complexity 1 29 0 1899 131 25 45 chr17 30030261 30030575 -55407905 + AluJo SINE Alu 1 308 -4 24 67 0 0 chr17 30030627 30030672 -55407808 + AT_rich Low_complexity Low_complexity 1 45 0 21 36 0 0 chr17 30031024 30031052 -55407428 + AT_rich Low_complexity Low_complexity 1 28 0 417 104 15 0 chr17 30032080 30032147 -55406333 + HY3 scRNA scRNA 30 97 -4 26 30 0 0 chr17 30032302 30032335 -55406145 + AT_rich Low_complexity Low_complexity 1 33 0 2038 101 25 4 chr17 30032412 30032716 -55405764 - AluSx SINE Alu 0 310 1 28 86 0 0 chr17 30035067 30035137 -55403343 + AT_rich Low_complexity Low_complexity 1 70 0 26 0 0 0 chr17 30035577 30035603 -55402877 + AT_rich Low_complexity Low_complexity 1 26 0 232 248 114 38 chr17 30035932 30036037 -55402443 + MIR SINE MIR 100 212 -50 337 308 131 8 chr17 30036276 30036406 -55402074 + MIR3 SINE MIR 38 183 -25 441 0 0 0 chr17 30237400 30237449 -55201031 + (TTTTG)n Simple_repeat Simple_repeat 1 49 0 414 309 15 0 chr17 30237521 30237722 -55200758 - AluSc SINE Alu -105 204 1 2178 103 0 0 chr17 30237774 30238088 -55200392 + AluSg SINE Alu 1 314 0 250 287 16 90 chr17 30238102 30238224 -55200256 + MER5B DNA MER1_type 66 178 0 509 294 87 16 chr17 30238577 30238761 -55199719 - MIR SINE MIR -34 228 32 * 1081 261 194 36 chr17 30238736 30239581 -55198899 + L2 LINE L2 2333 3292 -21 276 30 0 0 chr17 30239585 30239618 -55198862 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 539 338 89 18 chr17 30239945 30240170 -55198310 + MIR SINE MIR 21 261 -1 238 288 0 38 chr17 30240755 30240835 -55197645 - MIR3 SINE MIR -28 180 104 660 249 58 23 chr17 30241075 30241248 -55197232 + MIR SINE MIR 70 248 -14 1950 151 3 0 chr17 30241249 30241560 -55196920 + AluJb SINE Alu 1 312 0 209 209 0 0 chr17 30241646 30241689 -55196791 - MIR SINE MIR -109 153 111 248 217 0 0 chr17 30242551 30242597 -55195883 - L2 LINE L2 -13 3300 3255 1051 316 55 16 chr17 30242599 30243032 -55195448 + L2 LINE L2 2852 3301 -12 261 0 0 0 chr17 30243183 30243212 -55195268 + (T)n Simple_repeat Simple_repeat 1 29 0 268 300 45 0 chr17 30244223 30244333 -55194147 + LTR67 LTR ERVL 439 553 -4 206 260 82 14 chr17 30244352 30244425 -55194055 - L2 LINE L2 -50 3222 3145 806 292 58 53 chr17 30244930 30245290 -55193190 - L2 LINE L2 0 3313 2952 267 79 0 0 chr17 30245933 30245971 -55192509 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 122 0 24 chr17 30246816 30246857 -55191623 + (TG)n Simple_repeat Simple_repeat 1 40 0 201 180 20 20 chr17 30247225 30247275 -55191205 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 398 314 26 26 chr17 30247530 30247686 -55190794 + MIR SINE MIR 97 252 -10 246 381 0 0 chr17 30248377 30248461 -55190019 + MIR SINE MIR 154 237 -25 244 279 75 125 chr17 30248576 30249056 -55189424 + L2 LINE L2 2352 2807 -507 1330 211 52 36 chr17 30249269 30249634 -55188846 + MSTD LTR MaLR 1 371 -25 4322 222 20 46 chr17 30249641 30250671 -55187809 + MSTD-int LTR MaLR 2 1005 -730 305 317 16 8 chr17 30250774 30250897 -55187583 + MIR SINE MIR 136 259 -3 280 353 17 17 chr17 30250901 30251020 -55187460 - MIR SINE MIR -124 138 20 383 314 121 29 chr17 30252126 30252365 -55186115 - L3 LINE CR1 -7 1570 1310 238 208 21 21 chr17 30252548 30252596 -55185884 + MIR SINE MIR 32 79 -129 975 346 122 22 chr17 30252667 30253617 -55184863 + L2 LINE L2 2228 3272 0 818 222 68 11 chr17 30254141 30254317 -55184163 + MER5A DNA MER1_type 1 186 -3 295 320 125 30 chr17 30254341 30254541 -55183939 + MIR SINE MIR 31 249 -13 674 310 58 4 chr17 30255057 30255283 -55183197 + MIR SINE MIR 8 245 -17 1938 120 10 13 chr17 30255571 30255871 -55182609 + AluSx SINE Alu 1 299 -13 386 294 48 55 chr17 30255889 30256035 -55182445 - L2 LINE L2 0 3272 3128 688 247 237 23 chr17 30256045 30256349 -55182131 + MLT1I LTR MaLR 41 409 0 249 368 24 16 chr17 30257102 30257352 -55181128 + L2 LINE L2 2494 2745 -569 655 297 106 43 chr17 30257455 30257785 -55180695 + L2 LINE L2 2899 3254 -18 1677 145 16 36 chr17 30257785 30258089 -55180391 - AluJb SINE Alu -14 298 1 655 297 106 43 chr17 30258089 30258108 -55180372 + L2 LINE L2 3254 3270 -2 239 261 0 68 chr17 30258126 30258214 -55180266 - MIR SINE MIR -71 191 110 199 286 0 0 chr17 30259253 30259295 -55179185 - L2 LINE L2 -16 3256 3215 225 205 0 0 chr17 30259503 30259542 -55178938 - Charlie4 DNA MER1_type -1920 41 3 958 163 37 5 chr17 30259553 30259743 -55178737 + L1MA8 LINE L1 6091 6286 -5 510 258 16 8 chr17 30259888 30260012 -55178468 - L2 LINE L2 -2 3311 3187 187 221 247 13 chr17 30260019 30260096 -55178384 - L2 LINE L2 -241 3031 2937 25 0 0 0 chr17 30260783 30260808 -55177672 + AT_rich Low_complexity Low_complexity 1 25 0 474 332 79 5 chr17 30261030 30261220 -55177260 - MIR SINE MIR -6 256 53 392 306 34 27 chr17 30262607 30262754 -55175726 + MIR SINE MIR 22 169 -93 932 212 103 87 chr17 30262861 30263286 -55175194 - MLT1C LTR MaLR -23 444 13 1406 279 72 21 chr17 30263321 30263805 -55174675 - L2 LINE L2 -398 2916 2408 486 260 26 35 chr17 30264493 30264649 -55173831 - MIR SINE MIR -54 154 15 602 322 24 15 chr17 30265365 30265570 -55172910 + MIR SINE MIR 56 262 0 319 304 11 11 chr17 30265590 30265682 -55172798 - MIR SINE MIR -55 153 62 1687 229 73 42 chr17 30266907 30267457 -55171023 + L1ME1 LINE L1 114 680 -5716 308 120 0 20 chr17 30267468 30267518 -55170962 - MER58A DNA MER1_type 0 224 176 9117 88 19 23 chr17 30267518 30267620 -55170860 + HSMAR1 DNA Mariner 1 102 -1185 1881 144 0 10 chr17 30267620 30267919 -55170561 - AluSx SINE Alu -16 296 1 9117 88 19 23 chr17 30267919 30269102 -55169378 + HSMAR1 DNA Mariner 102 1280 -7 757 234 5 43 chr17 30269105 30269289 -55169191 - MER58A DNA MER1_type -47 177 1 3192 239 68 49 chr17 30269290 30270643 -55167837 + L1ME1 LINE L1 687 2065 -4331 808 200 42 36 chr17 30270663 30270828 -55167652 + MER20 DNA MER1_type 54 219 0 1438 217 91 28 chr17 30270830 30271472 -55167008 + L1ME1 LINE L1 2059 2689 -3526 * 2433 228 41 36 chr17 30271470 30272267 -55166213 + L1ME1 LINE L1 4107 4907 -1308 2857 221 18 53 chr17 30272272 30273085 -55165395 + L1ME1 LINE L1 5463 6403 0 504 158 0 0 chr17 30273099 30273194 -55165286 + GA-rich Low_complexity Low_complexity 3 97 0 357 227 23 23 chr17 30273374 30273462 -55165018 - MLT1L LTR MaLR -337 278 191 208 306 28 14 chr17 30273561 30273633 -55164847 + CT-rich Low_complexity Low_complexity 3 75 0 1430 110 0 31 chr17 30273725 30274044 -55164436 + AluSq SINE Alu 64 375 0 547 236 70 85 chr17 30274998 30275257 -55163223 + LTR16C LTR ERVL 26 280 -211 384 238 40 10 chr17 30275280 30275381 -55163099 - MER5A DNA MER1_type -77 112 9 368 283 98 15 chr17 30275384 30275589 -55162891 + LTR16C LTR ERVL 270 491 0 180 343 35 56 chr17 30275735 30275878 -55162602 + L2 LINE L2 2919 3058 -214 199 327 0 65 chr17 30275927 30276034 -55162446 + MIR SINE MIR 114 213 -49 361 287 74 0 chr17 30276912 30277020 -55161460 + MIR SINE MIR 71 186 -76 25 0 0 0 chr17 30277109 30277134 -55161346 + AT_rich Low_complexity Low_complexity 1 25 0 337 277 66 18 chr17 30277281 30277391 -55161089 - MIR SINE MIR -62 146 37 181 371 9 35 chr17 30277456 30277572 -55160908 + MIR SINE MIR 63 175 -87 271 339 161 0 chr17 30277769 30277881 -55160599 - MIR SINE MIR -113 149 20 363 44 0 0 chr17 30277903 30277948 -55160532 + (ATG)n Simple_repeat Simple_repeat 2 46 0 407 208 77 174 chr17 30278602 30278809 -55159671 + MIR3 SINE MIR 22 208 0 336 256 0 13 chr17 30278850 30278928 -55159552 + MIR SINE MIR 2 78 -184 1999 287 68 20 chr17 30278940 30279601 -55158879 + MER115 DNA AcHobo 1 693 0 245 329 0 12 chr17 30279604 30279689 -55158791 + MIR SINE MIR 90 173 -89 1814 147 3 10 chr17 30279689 30279988 -55158492 + AluJb SINE Alu 6 302 -10 372 335 43 22 chr17 30281064 30281249 -55157231 + MIR SINE MIR 50 238 -24 369 218 72 100 chr17 30281496 30281766 -55156714 + L2 LINE L2 2780 3048 -224 186 343 30 0 chr17 30281866 30281933 -55156547 + L2 LINE L2 3194 3262 -10 1997 226 148 35 chr17 30281940 30282955 -55155525 + L2 LINE L2 2170 3312 -1 2673 139 4 88 chr17 30283019 30283401 -55155079 + MER66A LTR ERV1 8 338 -140 1455 179 50 17 chr17 30283401 30283703 -55154777 + AluJb SINE Alu 1 312 0 2673 139 4 88 chr17 30283703 30283830 -55154650 + MER66A LTR ERV1 338 474 -4 767 239 62 112 chr17 30286255 30286756 -55151724 + MLT1K LTR MaLR 1 476 0 580 204 13 57 chr17 30286619 30286776 -55151704 + MLT1K LTR MaLR 439 588 0 243 296 15 22 chr17 30287136 30287271 -55151209 - MER103 DNA DNA -31 135 2 189 367 166 0 chr17 30288058 30288197 -55150283 - MIR SINE MIR -54 208 47 213 282 122 38 chr17 30288628 30288759 -55149721 + MIR SINE MIR 12 153 -109 251 274 48 57 chr17 30288809 30288933 -55149547 - L2 LINE L2 -8 3305 3183 244 261 0 15 chr17 30289030 30289095 -55149385 - MIR SINE MIR -108 154 91 267 324 20 29 chr17 30289146 30289248 -55149232 - MIR SINE MIR -56 206 106 1470 248 137 20 chr17 30289333 30289772 -55148708 + LTR16C LTR ERVL 1 490 -1 871 283 138 40 chr17 30290113 30290409 -55148071 + L2 LINE L2 2844 3196 -117 231 61 0 0 chr17 30290409 30290442 -55148038 + (TTA)n Simple_repeat Simple_repeat 1 33 0 871 283 138 40 chr17 30290442 30290572 -55147908 + L2 LINE L2 3196 3312 -1 321 311 0 9 chr17 30290620 30290726 -55147754 + LTR16C LTR ERVL 311 415 -76 278 306 82 0 chr17 30290803 30290901 -55147579 - MIR SINE MIR -152 110 5 1209 173 28 5 chr17 30291165 30291379 -55147101 - MER20 DNA MER1_type 0 219 1 252 341 132 0 chr17 30291382 30291473 -55147007 + L2 LINE L2 3199 3301 -12 206 136 23 0 chr17 30291484 30291528 -55146952 + (TGAA)n Simple_repeat Simple_repeat 4 48 0 586 293 89 16 chr17 30293009 30293200 -55145280 - MER63A DNA MER1_type 0 210 6 405 330 96 14 chr17 30293670 30293879 -55144601 - MIR SINE MIR -17 245 20 2083 179 97 26 chr17 30293902 30294365 -55144115 + MLT1D LTR MaLR 2 497 -8 318 248 76 48 chr17 30294647 30294752 -55143728 + MIR3 SINE MIR 9 116 -92 562 245 194 0 chr17 30296380 30296519 -55141961 - MER5A DNA MER1_type -8 181 16 365 373 45 0 chr17 30296585 30296786 -55141694 - MIR SINE MIR -17 245 36 452 288 109 24 chr17 30296840 30297465 -55141015 + L1ME4a LINE L1 5342 6040 -81 2361 41 7 7 chr17 30297506 30297801 -55140679 - AluY SINE Alu -16 295 1 343 289 88 66 chr17 30298424 30298832 -55139648 - L2 LINE L2 -429 2885 2469 427 273 203 12 chr17 30299424 30299639 -55138841 + MIR SINE MIR 1 252 -10 183 263 0 0 chr17 30300491 30300529 -55137951 + L2 LINE L2 3217 3254 -18 181 288 51 59 chr17 30301089 30301207 -55137273 - MIR SINE MIR -6 256 140 290 324 56 0 chr17 30301259 30301367 -55137113 - MIR SINE MIR -37 225 112 553 249 220 22 chr17 30302014 30302287 -55136193 - L3 LINE CR1 -96 1481 1155 533 270 69 37 chr17 30302312 30302503 -55135977 + MIR SINE MIR 30 226 -36 1701 144 7 18 chr17 30302622 30302934 -55135546 + AluJb SINE Alu 1 309 0 293 262 12 12 chr17 30303000 30303084 -55135396 + MIR SINE MIR 53 136 -72 21 0 0 0 chr17 30303144 30303165 -55135315 + AT_rich Low_complexity Low_complexity 1 21 0 1843 164 67 15 chr17 30304031 30304434 -55134046 + L1MB8 LINE L1 5754 6177 -1 2205 100 6 3 chr17 30305015 30305326 -55133154 - AluSx SINE Alu 0 312 1 183 100 0 0 chr17 30305522 30305552 -55132928 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 599 304 145 19 chr17 30305718 30306237 -55132243 + L2 LINE L2 2712 3313 0 243 245 0 0 chr17 30307038 30307091 -55131389 + (CA)n Simple_repeat Simple_repeat 1 53 0 210 91 0 0 chr17 30307888 30307921 -55130559 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 244 242 16 0 chr17 30308536 30308598 -55129882 + L1MB5 LINE L1 5711 5773 -469 950 198 62 5 chr17 30308628 30308820 -55129660 + MIR SINE MIR 58 260 -2 273 339 91 0 chr17 30309598 30309763 -55128717 - MER115 DNA AcHobo -475 218 39 192 315 74 0 chr17 30310217 30310271 -55128209 - L2 LINE L2 -5 3267 3210 1501 202 17 38 chr17 30310330 30310676 -55127804 + MLT1A2 LTR MaLR 5 343 -31 318 26 0 0 chr17 30310685 30310724 -55127756 + (GTATG)n Simple_repeat Simple_repeat 3 41 0 250 267 0 89 chr17 30311227 30311328 -55127152 + L2 LINE L2 3222 3313 0 1105 164 44 103 chr17 30311411 30311752 -55126728 - MER33 DNA MER1_type 0 324 4 972 278 13 0 chr17 30312266 30312500 -55125980 - MIR SINE MIR -21 241 5 803 184 6 25 chr17 30312808 30312971 -55125509 + L1MB5 LINE L1 6015 6174 0 200 194 0 0 chr17 30313908 30313944 -55124536 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 299 257 55 37 chr17 30314348 30314457 -55124023 + MIR3 SINE MIR 78 188 -20 * 483 268 105 52 chr17 30314454 30314607 -55123873 + L3 LINE CR1 1414 1574 -3 294 290 51 56 chr17 30315102 30315275 -55123205 + MIR SINE MIR 3 172 -62 1191 244 56 95 chr17 30315834 30316131 -55122349 - L2 LINE L2 0 3313 3006 2026 79 4 0 chr17 30316131 30316397 -55122083 - AluSg SINE Alu -18 292 26 1541 140 0 0 chr17 30316403 30316653 -55121827 - AluSx SINE Alu 0 309 60 1191 244 56 95 chr17 30316653 30317050 -55121430 - L2 LINE L2 -312 3001 2623 248 266 137 24 chr17 30317413 30317537 -55120943 + MIR SINE MIR 123 260 -2 327 292 80 0 chr17 30317689 30317802 -55120678 - MIR SINE MIR -67 195 74 1827 95 73 4 chr17 30317802 30318076 -55120404 + AluSp SINE Alu 1 293 -20 1244 181 128 105 chr17 30318433 30318793 -55119687 - MLT1C LTR MaLR -10 457 84 1616 177 20 7 chr17 30318793 30319092 -55119388 + AluJo SINE Alu 1 303 -9 1244 181 128 105 chr17 30319092 30319178 -55119302 - MLT1C LTR MaLR -383 84 1 700 136 15 30 chr17 30319183 30319315 -55119165 - MLT1C-int LTR MaLR -5 1366 1237 1951 97 0 8 chr17 30319320 30319588 -55118892 + AluSc SINE Alu 22 287 -22 437 153 71 41 chr17 30319608 30319706 -55118774 - MLT1C-int LTR MaLR -97 1274 1174 1840 175 27 30 chr17 30320523 30320889 -55117591 + MLT1A1 LTR MaLR 1 365 0 240 130 0 0 chr17 30321608 30321654 -55116826 + (TG)n Simple_repeat Simple_repeat 2 47 0 288 0 0 0 chr17 30321875 30321907 -55116573 + (TG)n Simple_repeat Simple_repeat 1 32 0 520 276 146 31 chr17 30322249 30322503 -55115977 + Charlie2 DNA MER1_type 25 307 -2475 790 213 33 5 chr17 30322646 30322857 -55115623 + Charlie2a DNA MER1_type 1465 1681 -1181 253 319 88 11 chr17 30322993 30323084 -55115396 + MIR3 SINE MIR 75 172 -36 388 280 16 24 chr17 30323863 30323988 -55114492 + LTR67 LTR ERVL 432 555 -2 747 112 22 0 chr17 30323988 30324122 -55114358 + (TCCA)n Simple_repeat Simple_repeat 4 140 0 481 295 88 12 chr17 30324365 30324595 -55113885 - MIR SINE MIR -7 255 11 413 263 79 0 chr17 30324618 30324732 -55113748 + MIR3 SINE MIR 83 205 -3 228 303 56 87 chr17 30324816 30325011 -55113469 - L1MEd LINE L1 -5510 609 421 1067 103 0 6 chr17 30325297 30325471 -55113009 + (TTCC)n Simple_repeat Simple_repeat 3 175 0 231 319 36 72 chr17 30326023 30326189 -55112291 + L2 LINE L2 2600 2759 -555 476 358 144 5 chr17 30326527 30326742 -55111738 - MIR SINE MIR -14 248 4 2091 303 48 36 chr17 30326799 30328118 -55110362 + L2 LINE L2 1972 3311 -2 529 178 0 22 chr17 30328276 30328411 -55110069 + (CAT)n Simple_repeat Simple_repeat 3 134 0 361 275 73 39 chr17 30328419 30328597 -55109883 - MIR SINE MIR 0 262 79 537 192 96 0 chr17 30329347 30329451 -55109029 - MIR SINE MIR -66 196 83 441 274 85 52 chr17 30329577 30329789 -55108691 - MIR SINE MIR -10 252 34 317 233 44 22 chr17 30329794 30329884 -55108596 + MIR SINE MIR 75 166 -96 355 290 65 32 chr17 30329987 30330111 -55108369 - MIR SINE MIR -59 149 22 488 260 8 39 chr17 30330314 30330441 -55108039 + MER5B DNA MER1_type 50 172 -6 281 248 171 54 chr17 30330456 30330585 -55107895 - MIR3 SINE MIR -59 149 6 292 309 0 0 chr17 30331213 30331297 -55107183 + MIR SINE MIR 35 118 -90 181 244 0 0 chr17 30331499 30331544 -55106936 - L2 LINE L2 -303 2969 2925 326 259 12 12 chr17 30331813 30331894 -55106586 + L2 LINE L2 3191 3271 -1 277 253 10 30 chr17 30331914 30332013 -55106467 + (TGAA)n Simple_repeat Simple_repeat 3 99 0 380 267 200 67 chr17 30332675 30332825 -55105655 + MER5A DNA MER1_type 14 183 -6 206 333 0 0 chr17 30332917 30332971 -55105509 - L2 LINE L2 -257 3056 3003 438 222 114 30 chr17 30333007 30333170 -55105310 + MIR SINE MIR 14 184 -67 412 339 38 35 chr17 30333690 30333979 -55104501 + L2 LINE L2 2904 3193 -120 793 153 174 0 chr17 30334049 30334193 -55104287 + AluJb SINE Alu 130 298 -14 209 280 31 10 chr17 30334193 30334282 -55104198 - MER5A DNA MER1_type -60 129 26 222 37 0 0 chr17 30334409 30334436 -55104044 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 281 295 31 70 chr17 30334481 30334610 -55103870 - L2 LINE L2 -9 3263 3140 784 214 7 0 chr17 30335295 30335449 -55103031 + AluJo SINE Alu 1 155 -157 374 225 180 0 chr17 30335515 30335626 -55102854 + MIR SINE MIR 105 235 -27 246 249 21 107 chr17 30336796 30336946 -55101534 + MIR SINE MIR 55 191 -71 248 169 17 51 chr17 30337457 30337516 -55100964 + MIR3 SINE MIR 115 171 -37 * 295 336 0 48 chr17 30337491 30337616 -55100864 - MIR3 SINE MIR -75 133 15 1453 178 22 70 chr17 30337852 30338135 -55100345 - MLT1D LTR MaLR -2 503 208 375 60 0 0 chr17 30338135 30338185 -55100295 + (TG)n Simple_repeat Simple_repeat 1 50 0 1453 178 22 70 chr17 30338185 30338199 -55100281 - MLT1D LTR MaLR -297 208 195 2019 117 4 0 chr17 30338199 30338463 -55100017 - AluSq SINE Alu -48 265 1 1453 178 22 70 chr17 30338463 30338711 -55099769 - MLT1D LTR MaLR -310 195 5 624 183 32 32 chr17 30339003 30339129 -55099351 + MER5A DNA MER1_type 8 133 -56 266 283 35 71 chr17 30339311 30339424 -55099056 + MIR3 SINE MIR 5 113 -95 379 268 105 7 chr17 30339630 30339783 -55098697 + MIR SINE MIR 84 251 -11 194 209 0 0 chr17 30339749 30339792 -55098688 + L2 LINE L2 3222 3264 -8 * 368 269 120 23 chr17 30340325 30340454 -55098026 + MIR SINE MIR 2 139 -69 223 103 0 0 chr17 30340666 30340695 -55097785 + L2 LINE L2 3262 3290 -23 465 346 56 19 chr17 30341364 30341578 -55096902 + MIR SINE MIR 24 245 -17 394 235 0 0 chr17 30341632 30341713 -55096767 - MIR SINE MIR -3 259 179 681 330 80 42 chr17 30342159 30342611 -55095869 + L2 LINE L2 2804 3272 0 235 278 173 28 chr17 30342813 30343014 -55095466 - MIR SINE MIR -16 246 1 325 306 99 63 chr17 30344122 30344344 -55094136 - L2 LINE L2 -463 2851 2622 405 0 0 0 chr17 30344404 30344449 -55094031 + (CA)n Simple_repeat Simple_repeat 2 46 0 688 229 51 25 chr17 30344454 30344611 -55093869 - MIR SINE MIR -94 168 8 206 291 146 0 chr17 30345306 30345416 -55093064 + MIR SINE MIR 63 188 -74 180 0 0 0 chr17 30346650 30346670 -55091810 + (T)n Simple_repeat Simple_repeat 1 20 0 27 49 0 0 chr17 30347812 30347853 -55090627 + GC_rich Low_complexity Low_complexity 1 41 0 192 125 0 0 chr17 30347870 30347902 -55090578 + (CAG)n Simple_repeat Simple_repeat 3 34 0 34 42 0 0 chr17 30347960 30348008 -55090472 + GC_rich Low_complexity Low_complexity 1 48 0 31 26 0 0 chr17 30348971 30349009 -55089471 + GC_rich Low_complexity Low_complexity 1 38 0 270 248 31 37 chr17 30349492 30349653 -55088827 + (TG)n Simple_repeat Simple_repeat 2 161 0 398 192 11 50 chr17 30350260 30350442 -55088038 + (CATA)n Simple_repeat Simple_repeat 4 178 0 458 294 61 92 chr17 30351130 30351392 -55087088 + L2 LINE L2 2982 3235 -37 215 261 0 0 chr17 30351431 30351477 -55087003 - L2 LINE L2 -16 3297 3252 766 144 16 8 chr17 30351547 30351672 -55086808 - FLAM_C SINE Alu -6 127 2 560 242 72 87 chr17 30351793 30352057 -55086423 - MIR SINE MIR -1 261 2 207 0 0 0 chr17 30352356 30352379 -55086101 + (CCA)n Simple_repeat Simple_repeat 3 25 0 586 238 153 127 chr17 30352538 30352917 -55085563 - L3 LINE CR1 -10 1567 1179 1852 156 11 7 chr17 30353231 30353559 -55084921 + AluJb SINE Alu 1 329 0 228 343 15 15 chr17 30353622 30353756 -55084724 + CT-rich Low_complexity Low_complexity 1 134 0 5725 46 26 0 chr17 30353805 30354501 -55083979 - L1PA5 LINE L1 0 6154 5441 3554 45 2 0 chr17 30354501 30354964 -55083516 + L1P LINE L1 4363 4826 -1320 382 301 70 21 chr17 30355559 30355702 -55082778 - MIR3 SINE MIR -48 160 11 228 286 184 0 chr17 30356418 30356516 -55081964 - MIR3 SINE MIR -7 201 86 230 239 104 0 chr17 30356560 30356627 -55081853 - MIR SINE MIR -2 260 187 294 29 0 0 chr17 30356630 30356665 -55081815 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1664 164 0 42 chr17 30356682 30356968 -55081512 - AluJb SINE Alu -38 274 1 513 246 169 0 chr17 30356972 30357114 -55081366 - MIR SINE MIR -66 196 31 263 364 91 0 chr17 30357170 30357346 -55081134 - L2 LINE L2 -18 3295 3104 206 200 0 0 chr17 30358391 30358426 -55080054 + G-rich Low_complexity Low_complexity 3 37 0 284 297 148 0 chr17 30358450 30358551 -55079929 - MIR SINE MIR -30 232 117 442 213 41 57 chr17 30358665 30358787 -55079693 - MIR SINE MIR -109 153 34 249 228 21 28 chr17 30359220 30359365 -55079115 + CT-rich Low_complexity Low_complexity 2 145 0 376 237 47 89 chr17 30359560 30359750 -55078730 + L1ME LINE L1 5601 5782 -339 402 272 52 20 chr17 30361533 30361744 -55076736 - MIR SINE MIR -12 250 32 2505 44 14 0 chr17 30362625 30362918 -55075562 + AluY SINE Alu 1 297 -14 447 259 144 0 chr17 30363030 30363169 -55075311 - MIR SINE MIR -75 187 29 472 272 37 6 chr17 30363847 30364009 -55074471 - MER113 DNA MER1_type? -346 175 9 317 182 52 0 chr17 30364341 30364418 -55074062 - L1MC5 LINE L1 -36 7925 7845 519 224 8 0 chr17 30364459 30364577 -55073903 + MIR SINE MIR 32 149 -73 365 331 114 17 chr17 30365456 30365631 -55072849 + MIR3 SINE MIR 15 206 -2 458 266 209 42 chr17 30365989 30366495 -55071985 - L2 LINE L2 -1 3312 2892 769 153 22 51 chr17 30366495 30366632 -55071848 + FLAM_C SINE Alu 1 133 0 458 266 209 42 chr17 30366632 30366928 -55071552 - L2 LINE L2 -421 2892 2380 377 291 69 32 chr17 30367289 30367493 -55070987 - MIR SINE MIR -42 220 3 3139 246 51 59 chr17 30368378 30369065 -55069415 - L2 LINE L2 -2 3311 2640 1613 244 66 21 chr17 30369065 30369548 -55068932 - MLT1D LTR MaLR 0 505 1 3139 246 51 59 chr17 30369548 30370179 -55068301 - L2 LINE L2 -673 2640 2005 575 207 97 89 chr17 30370582 30370810 -55067670 + MIR SINE MIR 16 259 -3 285 278 26 70 chr17 30371101 30371216 -55067264 + MIR3 SINE MIR 51 160 -48 694 276 28 56 chr17 30371868 30371916 -55066564 - MIR SINE MIR 0 262 214 1809 180 7 0 chr17 30371916 30372211 -55066269 - AluJo SINE Alu -9 303 7 694 276 28 56 chr17 30372211 30372412 -55066068 - MIR SINE MIR -48 214 20 381 292 39 58 chr17 30372526 30372680 -55065800 - MIR SINE MIR -54 208 58 554 298 86 25 chr17 30373610 30373808 -55064672 - MIR SINE MIR -6 256 47 369 327 65 39 chr17 30375094 30375247 -55063233 + L2 LINE L2 2899 3055 -217 476 268 88 37 chr17 30375304 30375599 -55062881 + L1ME4a LINE L1 5810 6119 -2 2345 113 0 13 chr17 30375618 30375929 -55062551 - AluSx SINE Alu -5 307 1 317 212 8 91 chr17 30376434 30376566 -55061914 - L1MC4 LINE L1 0 8042 7922 414 337 149 19 chr17 30376695 30376956 -55061524 + L1MC4a LINE L1 5643 5937 -1871 2132 103 3 36 chr17 30377129 30377431 -55061049 + AluSx SINE Alu 1 292 -20 274 274 89 22 chr17 30377684 30377819 -55060661 + Charlie8 DNA MER1_type 84 227 -2190 447 320 13 28 chr17 30378020 30378174 -55060306 - MIR SINE MIR -58 150 16 681 300 17 35 chr17 30378399 30378629 -55059851 + MIR SINE MIR 33 258 -4 187 290 110 10 chr17 30378614 30378714 -55059766 - MIR SINE MIR -2 260 151 * 972 311 27 59 chr17 30378786 30379310 -55059170 - L2 LINE L2 -2 3311 2805 609 279 0 14 chr17 30379316 30379463 -55059017 - MIR SINE MIR -116 146 2 732 238 41 6 chr17 30380353 30380525 -55057955 - MER5A DNA MER1_type -3 186 9 1084 165 0 6 chr17 30380578 30380742 -55057738 + FRAM SINE Alu 1 159 -17 194 253 391 0 chr17 30381939 30382026 -55056454 - L2 LINE L2 -12 3260 3140 635 232 147 17 chr17 30382211 30382388 -55056092 - MIR SINE MIR -47 215 16 644 161 22 28 chr17 30382903 30383083 -55055397 + GA-rich Low_complexity Low_complexity 2 180 0 246 295 106 74 chr17 30383207 30383424 -55055056 - L2 LINE L2 -6 3307 3084 243 317 24 0 chr17 30383655 30383737 -55054743 + L2 LINE L2 3149 3232 -40 384 298 113 0 chr17 30384520 30384691 -55053789 + MIR SINE MIR 1 191 -68 193 222 0 0 chr17 30384802 30384838 -55053642 + L2 LINE L2 3251 3286 -27 942 278 20 12 chr17 30384892 30385137 -55053343 - MIR SINE MIR -12 250 4 260 310 35 35 chr17 30385231 30385344 -55053136 + MIR SINE MIR 29 141 -67 238 356 67 0 chr17 30385670 30385805 -55052675 + L2 LINE L2 2853 2996 -276 2438 66 16 3 chr17 30385821 30386141 -55052339 + L1PA10 LINE L1 5717 6040 -128 309 319 125 44 chr17 30387592 30387887 -55050593 + L2 LINE L2 2443 2761 -553 1935 158 6 10 chr17 30388305 30388688 -55049792 - AluSx SINE Alu 0 382 1 636 242 54 21 chr17 30388778 30388964 -55049516 + MIR SINE MIR 65 256 -6 335 324 27 0 chr17 30389087 30389198 -55049282 + L2 LINE L2 3182 3295 -18 203 289 0 19 chr17 30390223 30390275 -55048205 + polypyrimidine Low_complexity Low_complexity 2 52 0 280 244 0 22 chr17 30390611 30390701 -55047779 + CT-rich Low_complexity Low_complexity 3 90 0 386 266 117 0 chr17 30391329 30391457 -55047023 + MIR3 SINE MIR 30 172 -36 270 250 11 0 chr17 30391890 30391978 -55046502 + (TA)n Simple_repeat Simple_repeat 1 89 0 398 336 106 24 chr17 30392212 30392420 -55046060 - MIR SINE MIR -18 244 20 411 130 0 0 chr17 30392470 30392547 -55045933 + (TG)n Simple_repeat Simple_repeat 2 78 0 376 291 40 72 chr17 30393125 30393348 -55045132 + MIR SINE MIR 47 262 0 2098 126 0 3 chr17 30393732 30394018 -55044462 + AluSp SINE Alu 1 285 -28 1647 176 0 61 chr17 30394105 30394435 -55044045 + AluJo SINE Alu 1 310 -2 21 0 0 0 chr17 30395748 30395769 -55042711 + AT_rich Low_complexity Low_complexity 1 21 0 398 306 27 60 chr17 30396059 30396292 -55042188 + MIR SINE MIR 9 245 -17 599 322 13 25 chr17 30396921 30397157 -55041323 + MIR SINE MIR 22 254 -8 228 356 17 0 chr17 30397278 30397393 -55041087 + L2 LINE L2 2670 2786 -528 1167 107 0 0 chr17 30397518 30397667 -55040813 - AluSq/x SINE Alu -163 149 1 252 325 30 93 chr17 30398692 30398929 -55039551 - L2 LINE L2 -41 3231 3010 378 0 0 0 chr17 30398966 30399008 -55039472 + (TG)n Simple_repeat Simple_repeat 2 43 0 1509 143 143 0 chr17 30400076 30400320 -55038160 + AluSx SINE Alu 15 293 -19 1099 104 0 0 chr17 30400583 30400737 -55037743 - L1MA3 LINE L1 0 6305 6152 1199 155 0 0 chr17 30400739 30400913 -55037567 - AluJb SINE Alu -138 174 1 535 125 0 11 chr17 30400917 30401005 -55037475 - L1MA3 LINE L1 -165 6140 6054 250 297 36 9 chr17 30401509 30401620 -55036860 - MIR3 SINE MIR -48 160 47 872 262 61 0 chr17 30401993 30402222 -55036258 - L1ME3 LINE L1 -330 5832 5590 223 229 0 0 chr17 30402246 30402294 -55036186 + L2 LINE L2 3221 3268 -4 398 271 83 14 chr17 30402396 30402540 -55035940 - MIR3 SINE MIR -11 197 44 21 0 0 0 chr17 30402671 30402692 -55035788 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr17 30403637 30403667 -55034813 + (TTCA)n Simple_repeat Simple_repeat 4 33 0 272 312 52 82 chr17 30403668 30403899 -55034581 - L2 LINE L2 -19 3253 3030 2450 224 32 76 chr17 30404140 30404514 -55033966 + L1ME3A LINE L1 5517 5849 -321 2168 97 4 4 chr17 30404514 30404793 -55033687 + AluSx SINE Alu 4 282 -30 2450 224 32 76 chr17 30404793 30405102 -55033378 + L1ME3A LINE L1 5849 6170 0 204 211 88 0 chr17 30405414 30405471 -55033009 + MIR SINE MIR 92 153 -109 460 326 67 71 chr17 30406169 30406201 -55032279 - L2 LINE L2 -52 3220 3189 234 0 0 0 chr17 30406201 30406227 -55032253 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 460 326 67 71 chr17 30406227 30407069 -55031411 - L2 LINE L2 -83 3189 2349 327 254 0 0 chr17 30407092 30407163 -55031317 - MIR SINE MIR -61 147 77 194 250 94 86 chr17 30407255 30407383 -55031097 - MIR SINE MIR -56 206 78 509 242 89 6 chr17 30407498 30407655 -55030825 + MIR SINE MIR 76 245 -17 193 233 164 14 chr17 30408598 30408671 -55029809 - L2 LINE L2 -29 3284 3201 1682 228 68 20 chr17 30408798 30409236 -55029244 + MLT1C LTR MaLR 1 459 -8 336 333 7 22 chr17 30410186 30410324 -55028156 + MIR SINE MIR 18 153 -55 225 270 16 0 chr17 30410550 30410613 -55027867 - MIR SINE MIR -58 150 87 305 265 61 61 chr17 30411580 30411712 -55026768 - MIR SINE MIR -111 151 20 222 310 110 28 chr17 30411845 30411990 -55026490 - MIR3 SINE MIR -5 203 47 * 269 260 32 84 chr17 30411984 30412037 -55026443 - MIR SINE MIR -36 226 172 2050 143 43 18 chr17 30412037 30412366 -55026114 + MER1B DNA MER1_type 1 337 0 269 260 32 84 chr17 30412366 30412466 -55026014 - MIR SINE MIR -90 172 81 527 296 101 5 chr17 30412750 30412949 -55025531 - MIR SINE MIR 0 262 45 495 314 6 23 chr17 30412969 30413144 -55025336 + MER5B DNA MER1_type 7 178 0 1387 212 5 19 chr17 30413298 30413635 -55024845 - MER33 DNA MER1_type 0 324 1 2332 116 0 0 chr17 30413681 30413991 -55024489 + AluSx SINE Alu 1 310 -2 748 282 166 15 chr17 30414257 30414732 -55023748 + L1ME4a LINE L1 5564 6110 -11 426 276 96 6 chr17 30415317 30415473 -55023007 - MIR SINE MIR -92 170 1 246 309 113 21 chr17 30416406 30416600 -55021880 - MIR SINE MIR -21 241 30 219 292 56 0 chr17 30416866 30416938 -55021542 - L2 LINE L2 -47 3225 3150 1079 215 18 4 chr17 30417343 30417571 -55020909 - MER96B DNA MER1_type? -186 231 1 336 320 61 7 chr17 30417591 30417738 -55020742 - MIR SINE MIR -19 243 89 217 295 0 0 chr17 30418276 30418337 -55020143 + MIR SINE MIR 20 80 -182 402 258 190 12 chr17 30418369 30418532 -55019948 - MIR SINE MIR -48 214 23 377 283 55 7 chr17 30418510 30418655 -55019825 + MIR SINE MIR 46 197 -65 * 224 286 0 0 chr17 30418653 30418709 -55019771 - L2 LINE L2 -4 3268 3213 * 238 240 217 8 chr17 30419491 30419620 -55018860 - L2 LINE L2 -212 3060 2905 630 175 34 160 chr17 30419655 30419848 -55018632 + MER106A DNA MER1_type 1 152 -84 1744 176 35 3 chr17 30419848 30420167 -55018313 + L1MB2 LINE L1 5840 6168 -3 630 175 34 160 chr17 30420167 30420241 -55018239 + MER106A DNA MER1_type 152 234 -2 800 202 150 0 chr17 30420372 30420565 -55017915 - MER58A DNA MER1_type -2 222 1 189 300 0 0 chr17 30421382 30421442 -55017038 + MIR SINE MIR 94 153 -109 248 269 0 0 chr17 30421512 30421564 -55016916 + L2 LINE L2 3205 3256 -16 581 224 125 0 chr17 30421895 30422047 -55016433 - MER96 DNA MER1_type -4 171 1 476 239 10 81 chr17 30422193 30422390 -55016090 - MER5A DNA MER1_type 0 189 7 303 192 0 0 chr17 30422404 30422456 -55016024 + MER94 DNA DNA 1 52 -82 1032 194 6 0 chr17 30422497 30422672 -55015808 + MER58A DNA MER1_type 47 222 -2 366 123 0 0 chr17 30423376 30423433 -55015047 + (TG)n Simple_repeat Simple_repeat 1 57 0 222 348 25 0 chr17 30423447 30423565 -55014915 + (TG)n Simple_repeat Simple_repeat 2 122 0 260 314 78 93 chr17 30424953 30425297 -55013183 + L2 LINE L2 2928 3266 -6 443 338 19 0 chr17 30425554 30425711 -55012769 + MIR SINE MIR 38 197 -65 400 324 34 14 chr17 30426330 30426478 -55012002 - L2 LINE L2 -3 3310 3160 513 236 40 29 chr17 30426836 30427010 -55011470 - L2 LINE L2 -586 2728 2553 2135 139 0 3 chr17 30427012 30427321 -55011159 + AluSx SINE Alu 1 308 -4 1211 294 253 38 chr17 30427642 30428887 -55009593 - L2 LINE L2 -948 2366 1391 1989 140 7 0 chr17 30428887 30429185 -55009295 + AluSx SINE Alu 2 301 0 1211 294 253 38 chr17 30429185 30429761 -55008719 - L2 LINE L2 -1923 1391 151 367 253 21 0 chr17 30430059 30430154 -55008326 - MER5A DNA MER1_type -84 105 9 902 264 52 8 chr17 30430160 30430410 -55008070 - Charlie8 DNA MER1_type -2156 261 1 2141 107 0 7 chr17 30431464 30431745 -55006735 + AluSx SINE Alu 1 279 -33 585 42 0 0 chr17 30431745 30431817 -55006663 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 348 291 17 8 chr17 30432195 30432312 -55006168 + MIR SINE MIR 73 190 -72 275 315 119 13 chr17 30433115 30433350 -55005130 + L2 LINE L2 2101 2360 -954 187 278 0 19 chr17 30433587 30433641 -55004839 + MIR3 SINE MIR 133 185 -23 242 214 214 27 chr17 30434114 30434226 -55004254 + L2 LINE L2 3137 3269 -3 1818 172 13 17 chr17 30434438 30434740 -55003740 - AluJb SINE Alu -11 301 1 2480 117 20 6 chr17 30434988 30435346 -55003134 - THE1B LTR MaLR -1 363 1 192 302 226 34 chr17 30435413 30435767 -55002713 + L2 LINE L2 2556 2977 -337 1664 130 13 8 chr17 30436208 30436446 -55002034 + AluSx SINE Alu 56 294 -18 607 282 79 59 chr17 30436870 30437210 -55001270 - L2 LINE L2 0 3272 2926 212 325 108 48 chr17 30437316 30437482 -55000998 - MIR SINE MIR -38 224 49 236 163 0 0 chr17 30438097 30438140 -55000340 - MER5A DNA MER1_type 0 189 147 * 276 196 0 18 chr17 30438122 30438178 -55000302 + MER5A DNA MER1_type 100 154 -35 194 265 265 0 chr17 30438412 30438495 -54999985 - MIR SINE MIR -63 145 41 521 245 48 37 chr17 30438585 30438773 -54999707 + MLT1J2 LTR MaLR 11 200 -250 278 295 107 40 chr17 30438813 30438962 -54999518 + MLT1J2 LTR MaLR 290 448 -2 555 316 23 6 chr17 30438970 30439147 -54999333 + MER5A DNA MER1_type 7 186 -3 848 208 187 4 chr17 30439162 30439446 -54999034 + MER58 DNA MER1_type 3 2416 -4 243 200 88 125 chr17 30439984 30440144 -54998336 + MLT1J LTR MaLR 100 253 -258 914 237 48 99 chr17 30440718 30441132 -54997348 + MLT1J LTR MaLR 119 511 0 303 267 0 17 chr17 30441315 30441431 -54997049 - MER113 DNA MER1_type? -397 124 11 257 232 171 0 chr17 30441457 30441539 -54996941 + L2 LINE L2 3175 3270 -2 281 314 88 0 chr17 30442746 30442848 -54995632 - MIR SINE MIR -62 146 36 268 311 78 0 chr17 30443783 30443886 -54994594 + L2 LINE L2 3145 3255 -17 237 254 0 0 chr17 30444396 30444455 -54994025 - MIR SINE MIR -109 153 95 266 289 133 0 chr17 30445353 30445436 -54993044 + MIR3 SINE MIR 72 165 -43 1017 196 14 37 chr17 30445452 30445666 -54992814 + MER2 DNA MER2_type 2 210 -135 22 35 0 0 chr17 30445677 30445706 -54992774 + AT_rich Low_complexity Low_complexity 1 29 0 224 154 19 0 chr17 30445929 30445981 -54992499 + GA-rich Low_complexity Low_complexity 2 54 0 294 29 0 0 chr17 30447457 30447492 -54990988 + (TA)n Simple_repeat Simple_repeat 2 36 0 288 0 0 0 chr17 30447497 30447529 -54990951 + (TG)n Simple_repeat Simple_repeat 2 33 0 185 91 0 30 chr17 30447960 30447993 -54990487 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 333 277 18 0 chr17 30447995 30448107 -54990373 - L1MC3 LINE L1 -1929 5856 5743 354 249 47 35 chr17 30448332 30448501 -54989979 + MIR3 SINE MIR 37 207 -1 347 315 235 7 chr17 30448562 30448851 -54989629 - L2 LINE L2 -20 3252 2898 436 301 39 0 chr17 30449604 30449757 -54988723 - MIR3 SINE MIR -2 206 48 2051 105 40 46 chr17 30449925 30450191 -54988289 + L1PA13 LINE L1 5794 6059 -104 2158 110 23 16 chr17 30450191 30450501 -54987979 + AluSx SINE Alu 1 312 0 2051 105 40 46 chr17 30450501 30450605 -54987875 + L1PA13 LINE L1 6059 6162 -1 952 279 89 58 chr17 30450683 30450733 -54987747 + HAL1b LINE L1 47 94 -1254 379 237 136 17 chr17 30450733 30450887 -54987593 + FLAM_A SINE Alu 1 133 0 952 279 89 58 chr17 30450887 30451591 -54986889 + HAL1b LINE L1 94 824 -524 2368 212 80 81 chr17 30451755 30452675 -54985805 + L1MC5 LINE L1 6480 7418 -543 1273 233 18 21 chr17 30452788 30453127 -54985353 + L1MB7 LINE L1 4604 4941 -1205 1149 211 110 36 chr17 30453207 30453592 -54984888 - MER39 LTR ERV1 -87 620 1 3695 209 52 42 chr17 30453592 30453849 -54984631 + L1MB7 LINE L1 4938 5191 -993 1704 180 20 23 chr17 30453849 30454155 -54984325 + AluJo SINE Alu 7 311 -1 3695 209 52 42 chr17 30454155 30455121 -54983359 + L1MB7 LINE L1 5191 6184 0 1916 149 24 3 chr17 30455969 30456264 -54982216 + AluJo SINE Alu 1 301 -11 316 228 43 169 chr17 30456305 30456489 -54981991 - LTR67 LTR ERVL -368 189 29 1932 119 48 10 chr17 30457299 30457592 -54980888 - AluSx SINE Alu -7 305 2 278 258 78 24 chr17 30457692 30457817 -54980663 - MLT1I LTR MaLR -26 406 285 1965 153 0 3 chr17 30457915 30458215 -54980265 - AluSx SINE Alu -13 299 1 329 259 52 43 chr17 30458245 30458361 -54980119 - MLT1J1 LTR MaLR -294 152 36 2130 119 0 26 chr17 30458985 30459287 -54979193 + AluSx SINE Alu 1 294 -18 1174 238 125 66 chr17 30459377 30459935 -54978545 - MLT1E LTR MaLR -2 591 1 373 275 67 13 chr17 30460064 30460213 -54978267 - MIR3 SINE MIR -11 197 41 196 326 41 20 chr17 30460457 30460555 -54977925 + L2 LINE L2 2119 2218 -1096 501 292 106 4 chr17 30460719 30460945 -54977535 - MIR SINE MIR -6 256 8 660 26 0 0 chr17 30461118 30461196 -54977284 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1794 169 7 13 chr17 30461217 30461519 -54976961 - AluSx SINE Alu -12 300 1 358 279 108 25 chr17 30462467 30462625 -54975855 + MIR SINE MIR 33 203 -59 608 304 45 12 chr17 30462804 30463062 -54975418 + MIR SINE MIR 1 261 -1 585 210 60 30 chr17 30463294 30463461 -54975019 - MER5B DNA MER1_type -5 173 2 357 150 0 14 chr17 30463573 30463684 -54974796 + MER96 DNA MER1_type? 1 164 -11 686 198 6 0 chr17 30463854 30464031 -54974449 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 606 196 6 22 chr17 30464052 30464195 -54974285 + (TCCA)n Simple_repeat Simple_repeat 1 142 -34 2061 122 82 20 chr17 30464195 30464538 -54973942 - THE1B LTR MaLR 0 364 1 606 196 6 22 chr17 30464538 30464573 -54973907 + (TCCA)n Simple_repeat Simple_repeat 142 176 0 230 246 14 29 chr17 30464592 30464661 -54973819 - L2 LINE L2 -1 3312 3245 393 273 74 0 chr17 30465048 30465169 -54973311 - MIR3 SINE MIR -1 207 78 490 304 70 43 chr17 30465314 30465558 -54972922 - MIR SINE MIR -11 251 3 230 309 0 0 chr17 30466254 30466322 -54972158 + L2 LINE L2 3200 3267 -5 634 231 14 83 chr17 30466946 30467162 -54971318 + L2 LINE L2 3113 3313 0 599 216 6 0 chr17 30467322 30467484 -54970996 + (ATG)n Simple_repeat Simple_repeat 3 165 0 263 315 41 48 chr17 30467549 30467695 -54970785 - MIR SINE MIR -74 188 45 1001 272 44 26 chr17 30469784 30470126 -54968354 - MLT1I LTR MaLR -52 357 10 4227 98 12 2 chr17 30471123 30471715 -54966765 - L1PA10 LINE L1 0 6168 5571 1128 83 0 0 chr17 30471715 30471859 -54966621 + L1PA10 LINE L1 5403 5546 -622 369 279 113 6 chr17 30472597 30472760 -54965720 - MIR3 SINE MIR -2 206 25 920 194 55 26 chr17 30472960 30473202 -54965278 + L1MB8 LINE L1 5932 6178 0 1810 193 68 68 chr17 30474186 30474315 -54964165 + MER74B LTR ERVL 56 184 -438 2460 87 0 0 chr17 30474315 30474625 -54963855 - AluSg SINE Alu 0 310 1 1810 193 68 68 chr17 30474625 30475012 -54963468 + MER74B LTR ERVL 183 572 -50 751 276 13 13 chr17 30475308 30475533 -54962947 + MIR SINE MIR 17 241 -21 252 290 129 8 chr17 30475972 30476096 -54962384 + MIR SINE MIR 59 197 -65 376 266 11 0 chr17 30476197 30476291 -54962189 - MIR SINE MIR -165 97 3 25 0 0 0 chr17 30476570 30476595 -54961885 + AT_rich Low_complexity Low_complexity 1 25 0 1838 167 0 3 chr17 30477883 30478171 -54960309 + AluSx SINE Alu 1 287 -25 210 159 48 79 chr17 30479860 30479923 -54958557 + L2 LINE L2 3253 3313 0 324 269 35 14 chr17 30479927 30480072 -54958408 + (TGAA)n Simple_repeat Simple_repeat 3 150 0 266 232 19 142 chr17 30480673 30480828 -54957652 + MIR SINE MIR 61 196 -66 292 71 36 0 chr17 30480968 30481024 -54957456 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 423 271 88 11 chr17 30481357 30481538 -54956942 - MIR SINE MIR -31 231 37 370 308 8 0 chr17 30482370 30482503 -54955977 + L2 LINE L2 2509 2642 -672 238 300 29 115 chr17 30482634 30482877 -54955603 + L2 LINE L2 2957 3178 -94 452 265 74 0 chr17 30482905 30483067 -54955413 - MER96 DNA MER1_type -1 174 1 385 282 72 39 chr17 30483875 30484056 -54954424 - L3 LINE CR1 -202 1375 1189 480 35 0 0 chr17 30484504 30484562 -54953918 + (TG)n Simple_repeat Simple_repeat 1 58 0 3136 55 5 0 chr17 30484858 30485255 -54953225 - L1P LINE L1 -999 5147 4749 2696 75 3 3 chr17 30485255 30485597 -54952883 + L1PA7 LINE L1 5805 6153 -1 654 315 69 17 chr17 30486050 30486529 -54951951 + L1MC4a LINE L1 5564 6067 -1741 247 393 52 30 chr17 30486660 30486795 -54951685 - L2 LINE L2 -6 3266 3129 538 273 67 0 chr17 30487168 30487318 -54951162 + MER63A DNA MER1_type 48 207 -3 382 247 62 79 chr17 30487816 30487994 -54950486 + MIR3 SINE MIR 34 208 0 184 291 55 129 chr17 30488318 30488738 -54949742 + L2 LINE L2 2804 3192 -80 262 351 0 0 chr17 30489179 30489273 -54949207 + LTR16A LTR ERVL 329 422 -28 586 300 69 6 chr17 30489611 30489771 -54948709 - MER5B DNA MER1_type -8 170 1 337 289 96 36 chr17 30489774 30489940 -54948540 + MIR SINE MIR 15 190 -72 359 259 0 12 chr17 30490398 30490483 -54947997 + MIR3 SINE MIR 79 162 -46 226 214 0 0 chr17 30491168 30491210 -54947270 + CT-rich Low_complexity Low_complexity 1 42 0 477 289 93 25 chr17 30491476 30491680 -54946800 - MIR SINE MIR -11 251 34 415 241 56 0 chr17 30491671 30491779 -54946701 + L2 LINE L2 3199 3312 -1 * 197 83 28 0 chr17 30492607 30492643 -54945837 + (TTG)n Simple_repeat Simple_repeat 3 39 0 749 314 155 15 chr17 30493001 30493545 -54944935 - L2 LINE L2 -3 3310 2698 968 176 16 39 chr17 30494017 30494057 -54944423 - MER5B DNA MER1_type 0 178 139 2007 232 103 12 chr17 30494057 30494553 -54943927 + MLT1F LTR MaLR 1 541 -1 968 176 16 39 chr17 30494553 30494694 -54943786 - MER5B DNA MER1_type -39 139 1 198 393 40 35 chr17 30495527 30495691 -54942789 - L2 LINE L2 -52 3220 3052 2318 60 0 0 chr17 30495691 30496009 -54942471 - AluY SINE Alu 0 318 1 198 393 40 35 chr17 30496009 30496044 -54942436 - L2 LINE L2 -220 3052 3019 590 280 6 17 chr17 30496885 30497060 -54941420 - Charlie8 DNA MER1_type -2138 279 107 1809 117 11 4 chr17 30497645 30497911 -54940569 + AluSx SINE Alu 1 268 -44 2086 138 21 53 chr17 30498397 30498554 -54939926 + Tigger2a DNA MER2_type 1 161 -2547 1503 157 0 46 chr17 30498554 30498835 -54939645 + AluJo SINE Alu 1 268 -44 2086 138 21 53 chr17 30498835 30499055 -54939425 + Tigger2a DNA MER2_type 161 366 -68 3451 108 6 0 chr17 30499055 30499548 -54938932 + L1P4 LINE L1 5324 5819 -344 477 317 0 14 chr17 30499854 30499999 -54938481 - MIR3 SINE MIR -21 187 45 240 212 45 15 chr17 30500078 30500144 -54938336 + MIR3 SINE MIR 87 154 -54 2344 116 140 8 chr17 30500267 30500645 -54937835 + MSTA LTR MaLR 1 428 0 254 303 141 43 chr17 30500723 30500908 -54937572 + L2 LINE L2 2610 2812 -502 347 333 126 67 chr17 30500965 30501322 -54937158 + L2 LINE L2 2895 3272 0 526 295 132 70 chr17 30502188 30502605 -54935875 + L2 LINE L2 2828 3270 -2 21 0 0 0 chr17 30502608 30502629 -54935851 + AT_rich Low_complexity Low_complexity 1 21 0 1450 256 115 56 chr17 30503865 30504434 -54934046 + MLT1G LTR MaLR 3 590 0 372 326 11 43 chr17 30505241 30505425 -54933055 + MIR SINE MIR 54 231 -31 * 683 328 25 4 chr17 30505401 30505636 -54932844 - MIR SINE MIR -11 251 12 3358 141 35 11 chr17 30506672 30507213 -54931267 - MER41C LTR ERV1 0 554 1 183 203 253 38 chr17 30507392 30507471 -54931009 + MIR SINE MIR 53 148 -114 2135 269 33 122 chr17 30509133 30509536 -54928944 + LTR8A LTR ERV1 34 471 -256 1971 127 3 3 chr17 30509536 30509835 -54928645 - AluSx SINE Alu -13 299 1 1450 151 0 8 chr17 30509839 30510107 -54928373 - AluSq SINE Alu 0 314 49 2135 269 33 122 chr17 30510107 30510459 -54928021 + LTR8A LTR ERV1 474 727 0 301 324 29 29 chr17 30510618 30510757 -54927723 - MIR SINE MIR -18 244 106 224 238 95 0 chr17 30510754 30510817 -54927663 - MER5A DNA MER1_type -62 127 59 * 22 0 0 0 chr17 30510862 30510884 -54927596 + AT_rich Low_complexity Low_complexity 1 22 0 2755 242 49 43 chr17 30510892 30512028 -54926452 - L2 LINE L2 -149 3164 2034 664 48 0 0 chr17 30512152 30512236 -54926244 - L1PA5 LINE L1 0 6154 6071 507 335 24 0 chr17 30512293 30512460 -54926020 - MIR SINE MIR -13 249 79 211 149 43 0 chr17 30512574 30512621 -54925859 + (CAT)n Simple_repeat Simple_repeat 3 51 0 500 320 52 21 chr17 30512628 30512822 -54925658 - MIR SINE MIR -15 247 48 1893 138 0 0 chr17 30512862 30513144 -54925336 - AluSx SINE Alu -30 282 1 210 189 0 0 chr17 30513616 30513653 -54924827 + MIR SINE MIR 89 125 -83 340 232 125 54 chr17 30513868 30514036 -54924444 + MIR SINE MIR 24 203 -59 280 149 0 0 chr17 30514707 30514754 -54923726 + MIR SINE MIR 82 128 -134 183 269 30 0 chr17 30514850 30514917 -54923563 + MIR SINE MIR 168 236 -26 565 272 31 31 chr17 30514984 30515175 -54923305 + MIR SINE MIR 47 237 -25 2056 132 0 0 chr17 30515758 30516106 -54922374 + AluSx SINE Alu 2 349 0 183 42 0 0 chr17 30516132 30516156 -54922324 + (ATG)n Simple_repeat Simple_repeat 1 24 0 312 270 161 57 chr17 30516160 30516371 -54922109 - MIR SINE MIR -10 252 20 300 347 146 24 chr17 30517303 30517516 -54920964 + MIR SINE MIR 21 259 -3 307 308 76 41 chr17 30517524 30517696 -54920784 + MIR SINE MIR 10 187 -75 422 302 121 7 chr17 30518379 30518528 -54919952 - MIR SINE MIR -25 237 72 191 374 47 19 chr17 30518522 30518629 -54919851 + L2 LINE L2 3157 3266 -6 * 284 62 0 21 chr17 30518822 30518870 -54919610 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 201 364 10 30 chr17 30518874 30518973 -54919507 + L2 LINE L2 2994 3090 -182 1678 309 136 19 chr17 30519457 30520318 -54918162 + L3 LINE CR1 614 1575 -2 684 324 40 32 chr17 30520733 30520986 -54917494 + MIR SINE MIR 6 260 -2 236 133 0 117 chr17 30521395 30521455 -54917025 - Tigger5 DNA MER2_type -354 1969 1917 225 232 71 0 chr17 30521859 30521915 -54916565 + L2 LINE L2 3186 3245 -27 761 312 135 51 chr17 30521932 30522672 -54915808 + L2 LINE L2 2152 2953 -361 255 31 0 0 chr17 30522738 30522770 -54915710 + (TG)n Simple_repeat Simple_repeat 2 33 0 1300 99 0 0 chr17 30522810 30522982 -54915498 - AluSq SINE Alu -141 172 1 479 244 8 30 chr17 30522983 30523114 -54915366 - MIR SINE MIR -56 206 79 477 176 55 0 chr17 30523404 30523495 -54914985 + MLT1D LTR MaLR 44 139 -366 497 148 0 1 chr17 30523527 30523618 -54914862 + L1MA9 LINE L1 6072 6170 -130 886 246 34 97 chr17 30523627 30523666 -54914814 + MLT1D LTR MaLR 175 215 -288 1470 127 0 9 chr17 30523666 30523940 -54914540 + AluSg/x SINE Alu 73 310 0 886 246 34 97 chr17 30523940 30524168 -54914312 + MLT1D LTR MaLR 215 461 -42 1091 242 5 0 chr17 30524726 30524945 -54913535 + MER58A DNA MER1_type 5 224 0 1748 134 33 11 chr17 30525027 30525339 -54913141 + AluSx SINE Alu 1 318 0 1848 92 4 0 chr17 30525440 30525689 -54912791 + AluSp SINE Alu 53 302 -11 189 300 256 0 chr17 30526544 30526634 -54911846 + L2 LINE L2 3197 3309 -4 431 317 36 5 chr17 30526660 30526847 -54911633 + MIR SINE MIR 16 212 -50 506 170 0 0 chr17 30527659 30527753 -54910727 + L1MA4 LINE L1 6084 6177 -123 348 61 0 0 chr17 30527753 30527802 -54910678 + Alu SINE Alu 250 298 -3 467 225 8 0 chr17 30527802 30527974 -54910506 + L1MA4 LINE L1 6165 6337 0 287 301 115 64 chr17 30528119 30528185 -54910295 + L2 LINE L2 3150 3211 -102 1630 210 94 44 chr17 30528185 30528662 -54909818 + MLT1D LTR MaLR 3 503 -2 287 301 115 64 chr17 30528662 30528751 -54909729 + L2 LINE L2 3211 3313 0 372 267 105 37 chr17 30528782 30528973 -54909507 + MIR SINE MIR 20 223 -39 350 327 106 37 chr17 30529525 30529633 -54908847 + L1ME4a LINE L1 5563 5662 -459 1947 130 23 10 chr17 30529633 30529941 -54908539 - AluSx SINE Alu 0 312 1 350 327 106 37 chr17 30529941 30530154 -54908326 + L1ME4a LINE L1 5662 5909 -212 377 236 28 42 chr17 30530246 30530390 -54908090 + MLT1L LTR MaLR 134 275 -340 677 134 21 49 chr17 30530412 30530554 -54907926 + L1MB3 LINE L1 6042 6179 -4 408 276 35 59 chr17 30530685 30530888 -54907592 + L2 LINE L2 2171 2368 -946 1818 128 24 24 chr17 30530933 30531229 -54907251 - AluSx SINE Alu -16 296 1 230 298 79 40 chr17 30531282 30531610 -54906870 + L2 LINE L2 2337 2751 -563 353 335 60 20 chr17 30531689 30531889 -54906591 + L2 LINE L2 3106 3313 0 386 252 34 17 chr17 30532120 30532239 -54906241 + MIR SINE MIR 75 195 -67 351 0 0 0 chr17 30532612 30532651 -54905829 + (TG)n Simple_repeat Simple_repeat 1 39 0 1341 251 60 28 chr17 30533496 30533963 -54904517 - L1ME1 LINE L1 -5 6161 5680 1638 194 11 55 chr17 30534508 30534890 -54903590 - MLT1A1 LTR MaLR 0 365 1 2585 139 12 5 chr17 30535064 30535481 -54902999 - L1PA16 LINE L1 -6 6160 5741 503 292 17 17 chr17 30535756 30535934 -54902546 - MIR3 SINE MIR -10 198 21 289 314 159 27 chr17 30536633 30536832 -54901648 + MIR SINE MIR 16 229 -33 679 271 49 22 chr17 30536837 30537062 -54901418 + MIR SINE MIR 32 262 0 189 74 0 0 chr17 30537107 30537134 -54901346 + (T)n Simple_repeat Simple_repeat 1 27 0 221 211 105 0 chr17 30537407 30537464 -54901016 - L2 LINE L2 -52 3261 3199 180 0 0 0 chr17 30537500 30537520 -54900960 + (CTG)n Simple_repeat Simple_repeat 1 20 0 714 316 48 16 chr17 30537568 30537818 -54900662 - MIR SINE MIR -2 260 3 740 232 150 24 chr17 30538354 30538561 -54899919 + MIR SINE MIR 26 258 -4 307 263 42 0 chr17 30538575 30538670 -54899810 + MIR3 SINE MIR 92 190 -18 720 214 96 11 chr17 30540532 30540719 -54897761 - MIR SINE MIR -6 256 54 521 272 89 69 chr17 30541798 30542044 -54896436 - L2 LINE L2 -3 3269 3019 654 229 84 34 chr17 30542063 30542242 -54896238 + MLT1J LTR MaLR 1 188 -323 324 313 0 0 chr17 30543737 30543820 -54894660 + L2 LINE L2 3190 3272 0 1169 57 17 11 chr17 30544325 30544501 -54893979 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 249 33 0 0 chr17 30544533 30544563 -54893917 + (TC)n Simple_repeat Simple_repeat 1 30 0 264 59 0 0 chr17 30544563 30544597 -54893883 + (TA)n Simple_repeat Simple_repeat 1 34 0 2269 102 0 3 chr17 30545236 30545549 -54892931 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 30545959 30545980 -54892500 + AT_rich Low_complexity Low_complexity 1 21 0 7677 61 2 6 chr17 30545980 30546982 -54891498 + L1P LINE L1 4256 5253 -893 875 146 0 0 chr17 30546986 30547116 -54891364 - AluSq/x SINE Alu -183 130 1 22 35 0 0 chr17 30547119 30547148 -54891332 + AT_rich Low_complexity Low_complexity 1 29 0 3039 114 57 64 chr17 30547249 30547827 -54890653 + MER4B LTR ERV1 1 574 -36 268 239 8 214 chr17 30548471 30548709 -54889771 - MIR SINE MIR -51 211 23 226 282 30 144 chr17 30549754 30550059 -54888421 - L2 LINE L2 -22 3250 2981 263 364 20 10 chr17 30550139 30550301 -54888179 + MER5A DNA MER1_type 12 186 -3 771 233 6 6 chr17 30550323 30550482 -54887998 - MER5A DNA MER1_type -14 175 17 182 339 16 16 chr17 30550552 30550614 -54887866 + L3b LINE CR1 1440 1501 -82 767 230 95 25 chr17 30551675 30551875 -54886605 - MIR SINE MIR -2 260 47 2195 115 0 0 chr17 30551891 30552195 -54886285 - AluSq SINE Alu -9 304 1 369 295 150 29 chr17 30552223 30552430 -54886050 - MIR SINE MIR -15 247 16 367 225 162 0 chr17 30552830 30552941 -54885539 + MIR SINE MIR 119 247 -15 199 217 174 76 chr17 30553495 30553587 -54884893 + MIR SINE MIR 92 192 -70 180 426 33 0 chr17 30553794 30553916 -54884564 - L2 LINE L2 -4 3268 3143 315 216 174 79 chr17 30553928 30553961 -54884519 - LTR33 LTR ERVL -4 517 489 1924 122 3 35 chr17 30553961 30554272 -54884208 + AluSx SINE Alu 2 302 -10 315 216 174 79 chr17 30554272 30554428 -54884052 - LTR33 LTR ERVL -32 489 310 615 254 8 0 chr17 30554544 30554674 -54883806 - LTR33 LTR ERVL -372 149 19 248 230 0 58 chr17 30555087 30555174 -54883306 - L1ME4a LINE L1 -74 6047 5966 2018 114 4 0 chr17 30556406 30556711 -54881769 - AluSx SINE Alu 0 306 1 241 325 151 47 chr17 30557186 30557524 -54880956 + L2 LINE L2 176 548 -2766 661 302 140 22 chr17 30557542 30557993 -54880487 - L2 LINE L2 -4 3309 2806 351 318 99 77 chr17 30558171 30559497 -54878983 + L2 LINE L2 743 3307 -6 572 297 10 36 chr17 30559949 30560141 -54878339 - MIR SINE MIR -56 206 20 270 264 35 35 chr17 30560944 30561031 -54877449 + MIR SINE MIR 74 160 -102 2170 193 90 9 chr17 30561179 30561646 -54876834 + MLT1D LTR MaLR 1 505 0 984 193 74 4 chr17 30561816 30562060 -54876420 - Charlie5 DNA MER1_type 0 2624 2364 2390 159 62 19 chr17 30562064 30562530 -54875950 + MER66B LTR ERV1 1 486 0 578 310 12 6 chr17 30563659 30563830 -54874650 - MIR SINE MIR -89 173 2 242 302 0 0 chr17 30563846 30563909 -54874571 + L2 LINE L2 3246 3308 -5 285 316 105 17 chr17 30564744 30564870 -54873610 - MIR SINE MIR -60 148 10 * 627 271 26 0 chr17 30564808 30564963 -54873517 + MIR SINE MIR 17 175 -87 2101 159 48 22 chr17 30564963 30565496 -54872984 + MLT2A2 LTR ERVL 1 554 0 383 134 0 15 chr17 30566001 30566068 -54872412 - L1MB2 LINE L1 -2 6169 6104 266 360 54 42 chr17 30616099 30616504 -54821976 + L2 LINE L2 2566 2975 -339 369 278 74 1 chr17 30616611 30616719 -54821761 + L1MC4 LINE L1 6538 6646 -1139 260 269 15 0 chr17 30617011 30617078 -54821402 + MIR SINE MIR 62 129 -133 504 285 77 27 chr17 30617327 30617499 -54820981 + MLT1J2 LTR MaLR 74 261 -189 974 211 16 0 chr17 30617499 30617684 -54820796 - MER5A DNA MER1_type -1 188 1 504 285 77 27 chr17 30617684 30617732 -54820748 + MLT1J2 LTR MaLR 261 305 -145 207 204 0 37 chr17 30619043 30619097 -54819383 + MIR SINE MIR 20 71 -137 1324 267 58 47 chr17 30619144 30619677 -54818803 + L2 LINE L2 2781 3313 0 188 333 30 0 chr17 30619678 30619744 -54818736 + MIR3 SINE MIR 138 205 -3 424 301 10 78 chr17 30621253 30621363 -54817117 + MIR SINE MIR 48 141 -121 2038 146 3 7 chr17 30621363 30621671 -54816809 - AluSx SINE Alu -5 307 1 424 301 10 78 chr17 30621671 30621753 -54816727 + MIR SINE MIR 141 227 -35 260 356 139 0 chr17 30621881 30622083 -54816397 - L3 LINE CR1 -90 1487 1258 433 272 37 1 chr17 30622415 30622534 -54815946 - MIR SINE MIR -63 145 42 789 199 0 0 chr17 30622854 30622985 -54815495 - FLAM_A SINE Alu -2 131 1 1569 254 54 8 chr17 30623296 30623869 -54814611 + MLT2F LTR ERVL 3 650 -13 325 282 21 70 chr17 30623914 30624056 -54814424 + L2 LINE L2 2993 3127 -145 490 299 60 16 chr17 30625872 30626056 -54812424 + MIR3 SINE MIR 5 196 -12 200 94 31 0 chr17 30626268 30626300 -54812180 + (TG)n Simple_repeat Simple_repeat 1 33 0 553 276 53 18 chr17 30627312 30627482 -54810998 + MER5B DNA MER1_type 1 176 -2 538 194 200 39 chr17 30627503 30627658 -54810822 + MER5A DNA MER1_type 7 186 -3 391 307 47 13 chr17 30627708 30627858 -54810622 + MIR SINE MIR 94 248 -14 300 226 24 12 chr17 30627884 30627968 -54810512 + MIR SINE MIR 178 262 0 223 288 56 69 chr17 30628980 30629140 -54809340 - MIR SINE MIR -5 257 100 47 44 0 0 chr17 30629140 30629208 -54809272 + AT_rich Low_complexity Low_complexity 1 68 0 386 268 79 73 chr17 30630365 30630529 -54807951 - L2 LINE L2 -6 3266 3102 489 190 0 10 chr17 30630965 30631065 -54807415 - MER20 DNA MER1_type 0 219 121 1831 103 4 0 chr17 30631200 30631434 -54807046 + AluSx SINE Alu 1 235 -77 375 60 0 0 chr17 30631439 30631489 -54806991 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 267 327 105 7 chr17 30631779 30631932 -54806548 - MIR3 SINE MIR -6 202 35 264 301 106 24 chr17 30631998 30632121 -54806359 + MIR3 SINE MIR 76 208 0 318 348 50 12 chr17 30632731 30632892 -54805588 - MIR SINE MIR -75 187 21 502 244 67 62 chr17 30633083 30633276 -54805204 - MIR SINE MIR -47 215 22 2262 72 3 16 chr17 30633407 30633711 -54804769 - AluY SINE Alu -11 300 1 618 266 15 54 chr17 30633910 30634113 -54804367 + MLT1J1 LTR MaLR 252 446 0 1509 271 82 51 chr17 30634296 30634463 -54804017 + L2 LINE L2 2358 2518 -795 531 279 34 24 chr17 30634463 30634671 -54803809 - MER63A DNA MER1_type 0 210 1 1509 271 82 51 chr17 30634671 30634860 -54803620 + L2 LINE L2 2518 2700 -613 1687 145 26 43 chr17 30634860 30635164 -54803316 + AluJb SINE Alu 1 299 -13 1509 271 82 51 chr17 30635164 30635724 -54802756 + L2 LINE L2 2700 3312 -1 642 265 58 5 chr17 30636068 30636257 -54802223 + MIR SINE MIR 57 255 -7 329 264 29 79 chr17 30636607 30636747 -54801733 - MIR3 SINE MIR -71 137 5 199 139 28 0 chr17 30637149 30637185 -54801295 - MIR SINE MIR -118 144 108 327 266 176 43 chr17 30637893 30638126 -54800354 - L2 LINE L2 -100 3172 2909 1754 187 83 31 chr17 30638129 30638573 -54799907 - MLT1C LTR MaLR 0 467 1 288 338 45 59 chr17 30638727 30638949 -54799531 + L2 LINE L2 3046 3264 -8 265 343 29 0 chr17 30639576 30639681 -54798799 - MIR3 SINE MIR -10 198 91 501 289 128 5 chr17 30639998 30640202 -54798278 + MIR SINE MIR 4 232 -30 4550 14 1 0 chr17 30640271 30641051 -54797429 - L1PA2 LINE L1 -390 5765 4985 3481 18 0 0 chr17 30641051 30641435 -54797045 + L1PA2 LINE L1 5764 6155 0 648 265 57 38 chr17 30641771 30641982 -54796498 - MIR SINE MIR -15 247 33 2894 208 16 30 chr17 30642008 30642673 -54795807 - L1ME1 LINE L1 -6 6160 5505 998 217 131 38 chr17 30642738 30643111 -54795369 - HsTC2 DNA Tc2 -2 1896 1313 902 226 36 44 chr17 30643133 30643407 -54795073 - HsTC2 DNA Tc2 -1155 743 472 324 279 27 27 chr17 30643388 30643499 -54794981 - HsTC2 DNA Tc2 -1697 201 91 * 268 271 246 8 chr17 30643633 30643751 -54794729 + MIR SINE MIR 5 150 -112 360 263 105 15 chr17 30644169 30644302 -54794178 - L1ME4a LINE L1 -29 6092 5948 209 346 43 37 chr17 30644338 30644526 -54793954 - L2 LINE L2 -575 2739 2551 245 272 298 31 chr17 30645566 30645757 -54792723 + MIR3 SINE MIR 4 246 -16 267 31 0 0 chr17 30646581 30646613 -54791867 + (TTA)n Simple_repeat Simple_repeat 2 33 0 704 154 0 17 chr17 30646615 30646732 -54791748 - FLAM_A SINE Alu -27 115 1 587 240 5 73 chr17 30646747 30646951 -54791529 - MIR SINE MIR 0 262 73 237 159 0 0 chr17 30647455 30647499 -54790981 + (TG)n Simple_repeat Simple_repeat 1 44 0 180 272 99 62 chr17 30647586 30647667 -54790813 - L2 LINE L2 -298 2974 2891 243 312 54 11 chr17 30650299 30650392 -54788088 - MIR SINE MIR -150 112 16 410 382 26 0 chr17 30650448 30650600 -54787880 - L2 LINE L2 0 3272 3117 408 396 4 11 chr17 30650758 30651028 -54787452 + L2 LINE L2 2387 2654 -660 259 226 65 11 chr17 30651102 30651195 -54787285 - L1MEc LINE L1 -5345 1197 1100 266 31 0 0 chr17 30651195 30651227 -54787253 - LTR13 LTR ERVK 0 1007 976 713 242 167 0 chr17 30651388 30651574 -54786906 - MER58A DNA MER1_type -4 220 4 1439 162 147 4 chr17 30651598 30651857 -54786623 - AluSx SINE Alu -5 297 2 437 415 49 14 chr17 30652077 30652422 -54786058 - L1MEc LINE L1 -6000 825 469 206 357 89 9 chr17 30652424 30652536 -54785944 + L2 LINE L2 2638 2758 -556 199 352 9 67 chr17 30652556 30652661 -54785819 + L2 LINE L2 3174 3272 0 522 308 48 31 chr17 30653508 30653735 -54784745 - MIR SINE MIR -6 256 26 311 345 65 93 chr17 30654902 30655180 -54783300 + L2 LINE L2 3002 3271 -1 361 286 158 0 chr17 30656057 30656233 -54782247 - MIR SINE MIR -43 219 18 331 281 54 42 chr17 30656480 30656647 -54781833 - MIR3 SINE MIR -1 207 39 2604 290 28 6 chr17 30657452 30657952 -54780528 + MER9 LTR ERVK 1 511 0 319 265 176 0 chr17 30658132 30658234 -54780246 - MIR SINE MIR -63 145 26 493 201 158 43 chr17 30658447 30658611 -54779869 + MLT1L LTR MaLR 163 345 -270 347 330 77 10 chr17 30659604 30659798 -54778682 + L2 LINE L2 2815 3021 -251 590 297 161 42 chr17 30659902 30660584 -54777896 - L2 LINE L2 -182 3131 2351 186 276 11 58 chr17 30661278 30661365 -54777115 + L2 LINE L2 2945 3027 -245 246 185 0 37 chr17 30661936 30661990 -54776490 - L2 LINE L2 -1 3312 3261 267 214 0 0 chr17 30662403 30662473 -54776007 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 335 113 16 0 chr17 30662519 30662581 -54775899 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 219 217 0 58 chr17 30662758 30662827 -54775653 + CT-rich Low_complexity Low_complexity 1 65 0 851 243 78 67 chr17 30663470 30663841 -54774639 - MLT1H LTR MaLR -104 445 71 491 305 53 21 chr17 30664094 30664281 -54774199 + L2 LINE L2 3120 3312 -1 21 57 0 0 chr17 30666094 30666129 -54772351 + AT_rich Low_complexity Low_complexity 1 35 0 2020 142 0 0 chr17 30666358 30666668 -54771812 - AluSx SINE Alu -2 310 1 453 311 83 16 chr17 30666905 30667217 -54771263 - L1ME LINE L1 -549 5613 5281 977 179 4 92 chr17 30667217 30667457 -54771023 - MER20 DNA MER1_type 0 219 1 322 268 126 24 chr17 30667678 30667805 -54770675 - MIR SINE MIR -93 169 30 * 385 294 129 6 chr17 30667798 30667961 -54770519 + MIR3 SINE MIR 12 194 -14 252 319 175 0 chr17 30667978 30668138 -54770342 + MIR SINE MIR 63 250 -12 258 259 90 15 chr17 30669057 30669161 -54769319 + MIR SINE MIR 14 127 -81 201 216 0 0 chr17 30669197 30669234 -54769246 + L2 LINE L2 3210 3246 -26 408 274 219 18 chr17 30669300 30669464 -54769016 + MIR SINE MIR 2 198 -64 801 241 0 6 chr17 30669639 30669809 -54768671 + MIR SINE MIR 84 252 -10 201 394 21 0 chr17 30670343 30670437 -54768043 + MER5A DNA MER1_type 72 167 -22 300 291 76 0 chr17 30671139 30671218 -54767262 + MIR3 SINE MIR 102 186 -22 2116 113 3 3 chr17 30671807 30672108 -54766372 + AluSq SINE Alu 1 301 -12 3113 132 175 40 chr17 30672299 30672905 -54765575 - LTR12 LTR ERV1 0 688 1 2164 177 115 65 chr17 30673828 30674244 -54764236 + MLT1E2 LTR MaLR 56 507 -119 4016 120 52 2 chr17 30674244 30674853 -54763627 - MER51C LTR ERV1 0 640 1 2164 177 115 65 chr17 30674853 30674977 -54763503 + MLT1E2 LTR MaLR 507 623 -3 240 263 182 0 chr17 30675027 30675126 -54763354 + L2 LINE L2 3156 3272 0 956 264 54 4 chr17 30675242 30675481 -54762999 + MIR SINE MIR 12 262 0 397 305 0 9 chr17 30677191 30677296 -54761184 + MER81 DNA DNA 11 114 0 200 244 98 37 chr17 30678944 30679026 -54759454 + L2 LINE L2 623 709 -2605 486 294 160 17 chr17 30679163 30679394 -54759086 + L2 LINE L2 2606 2869 -445 293 325 201 0 chr17 30679678 30679832 -54758648 - MLT1L LTR MaLR -123 492 308 241 260 0 0 chr17 30679943 30679993 -54758487 - MLT1L LTR MaLR -446 169 120 496 275 62 38 chr17 30680602 30680762 -54757718 + MIR3 SINE MIR 20 183 -25 348 328 128 57 chr17 30680841 30681192 -54757288 - L2 LINE L2 -3 3310 2935 271 315 95 25 chr17 30681422 30681663 -54756817 - L2 LINE L2 0 3272 3015 2838 186 33 16 chr17 30681683 30682263 -54756217 - L1MB4 LINE L1 -2 6178 5589 336 258 0 49 chr17 30682874 30683037 -54755443 + (CCCCAA)n Simple_repeat Simple_repeat 6 160 0 380 327 64 0 chr17 30683690 30683846 -54754634 - MER117 DNA MER1_type -3 194 29 932 280 115 31 chr17 30683854 30684272 -54754208 + LTR16A1 LTR ERVL 1 453 -4 348 287 26 17 chr17 30684398 30684513 -54753967 - L2 LINE L2 -6 3307 3192 241 321 73 37 chr17 30685663 30685772 -54752708 + MIR3 SINE MIR 93 205 -3 513 254 170 36 chr17 30685817 30686041 -54752439 + MIR SINE MIR 8 261 -1 427 266 18 109 chr17 30686810 30686883 -54751597 - MIR SINE MIR -50 212 134 2361 70 0 0 chr17 30686883 30687181 -54751299 + AluY SINE Alu 1 298 -13 427 266 18 109 chr17 30687181 30687275 -54751205 - MIR SINE MIR -128 134 69 1503 191 3 19 chr17 30687275 30687584 -54750896 + AluJo SINE Alu 1 304 -8 427 266 18 109 chr17 30687584 30687644 -54750836 - MIR SINE MIR -193 69 5 468 325 66 6 chr17 30687934 30688100 -54750380 + MIR SINE MIR 22 197 -65 240 273 0 0 chr17 30688375 30688430 -54750050 - L3b LINE CR1 -420 1163 1109 258 253 13 27 chr17 30688992 30689067 -54749413 + CT-rich Low_complexity Low_complexity 1 74 0 334 257 73 37 chr17 30689204 30689313 -54749167 - MIR SINE MIR -117 145 33 342 296 59 13 chr17 30690008 30690160 -54748320 - MIR3 SINE MIR -13 195 37 201 234 21 21 chr17 30690505 30690552 -54747928 - L3 LINE CR1 -959 618 572 194 258 0 76 chr17 30691409 30691475 -54747005 + MIR SINE MIR 126 186 -76 642 272 193 3 chr17 30692202 30692503 -54745977 + L2 LINE L2 2385 2742 -572 347 102 0 0 chr17 30692512 30692561 -54745919 + MSTD LTR MaLR 1 49 -347 * 1114 196 58 22 chr17 30692557 30692782 -54745698 + MSTD LTR MaLR 153 385 -11 6643 211 90 47 chr17 30692791 30692936 -54745544 + MSTD-int LTR MaLR 2 139 -1596 894 63 79 8 chr17 30692936 30693062 -54745418 + MER85 DNA T2_type 1 135 -4 6643 211 90 47 chr17 30693062 30694573 -54743907 + MSTD-int LTR MaLR 139 1730 -5 1992 160 81 6 chr17 30694578 30694935 -54743545 + MSTD LTR MaLR 1 384 -12 297 209 209 81 chr17 30694963 30695111 -54743369 + L2 LINE L2 2797 2963 -351 180 158 0 0 chr17 30695565 30695603 -54742877 + (TGG)n Simple_repeat Simple_repeat 2 39 0 1165 267 89 22 chr17 30696048 30696419 -54742061 - MLT1J1 LTR MaLR -2 444 49 315 324 0 27 chr17 30697207 30697318 -54741162 - MIR SINE MIR -85 123 16 234 0 0 0 chr17 30697352 30697378 -54741102 + (TC)n Simple_repeat Simple_repeat 1 26 0 237 65 0 0 chr17 30699030 30699061 -54739419 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 293 290 115 91 chr17 30700146 30700432 -54738048 + L3 LINE CR1 1084 1376 -201 199 321 77 42 chr17 30700519 30700687 -54737793 - MIR SINE MIR -54 208 35 651 298 135 30 chr17 30701430 30702051 -54736429 + L2 LINE L2 2552 3237 -76 390 256 6 45 chr17 30702095 30702251 -54736229 + GA-rich Low_complexity Low_complexity 4 153 0 333 100 0 0 chr17 30702393 30702443 -54736037 + (CA)n Simple_repeat Simple_repeat 1 50 0 2030 113 3 0 chr17 30702507 30702791 -54735689 - AluSx SINE Alu -23 289 5 1461 173 32 0 chr17 30702940 30703041 -54735439 + AluJo SINE Alu 21 117 -195 329 0 24 0 chr17 30703041 30703082 -54735398 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1461 173 32 0 chr17 30703082 30703263 -54735217 + AluJo SINE Alu 117 312 0 270 302 143 16 chr17 30703585 30703711 -54734769 + MIR3 SINE MIR 2 143 -65 315 234 50 63 chr17 30703779 30703927 -54734553 - MLT1H LTR MaLR -2 611 431 273 305 95 60 chr17 30703938 30704138 -54734342 - MLT1I LTR MaLR -123 286 80 2145 194 72 23 chr17 30704209 30704642 -54733838 - MLT2B1 LTR ERVL -66 454 1 420 262 97 46 chr17 30704901 30705153 -54733327 + MLT1J1 LTR MaLR 66 325 -84 2125 83 30 10 chr17 30705705 30706005 -54732475 - AluY SINE Alu -5 306 1 759 292 138 48 chr17 30706060 30706497 -54731983 - L1MC4a LINE L1 -223 5898 5425 189 405 0 12 chr17 30706796 30706880 -54731600 + L3 LINE CR1 1431 1513 -64 227 199 199 30 chr17 30706942 30707073 -54731407 - L1ME4a LINE L1 -2 6119 5967 844 272 5 5 chr17 30707135 30707341 -54731139 + MIR SINE MIR 3 208 -54 438 294 140 25 chr17 30707400 30707686 -54730794 - L1ME4a LINE L1 -327 5794 5476 633 90 150 0 chr17 30707937 30708037 -54730443 - L1PA10 LINE L1 -1 6167 6053 445 298 41 0 chr17 30708749 30708870 -54729610 + MIR SINE MIR 4 129 -133 227 239 109 76 chr17 30709038 30709130 -54729350 + LTR33A LTR ERVL 57 151 -372 3577 104 31 2 chr17 30709482 30709999 -54728481 + L1PA15 LINE L1 5624 6155 -10 253 325 167 8 chr17 30710052 30710178 -54728302 + MIR SINE MIR 9 154 -108 779 196 0 0 chr17 30710558 30710691 -54727789 - FLAM_A SINE Alu 0 133 1 320 297 22 114 chr17 30711017 30711337 -54727143 + L2 LINE L2 2769 3058 -214 532 202 0 75 chr17 30711375 30711563 -54726917 + Charlie7 DNA MER1_type 991 1164 -1448 3299 212 43 17 chr17 30711645 30712518 -54725962 + Charlie7 DNA MER1_type 1156 2051 -561 189 0 0 0 chr17 30712577 30712598 -54725882 + (A)n Simple_repeat Simple_repeat 1 21 0 777 310 86 48 chr17 30713218 30713695 -54724785 + L2 LINE L2 2818 3312 -1 522 222 32 8 chr17 30714226 30714352 -54724128 + MIR SINE MIR 131 259 -3 251 319 0 0 chr17 30714413 30714482 -54723998 - L2 LINE L2 -1 3312 3244 232 291 12 35 chr17 30714554 30714640 -54723840 - L2 LINE L2 -223 3049 2966 354 325 53 48 chr17 30714864 30715092 -54723388 + MIR SINE MIR 20 248 -14 394 270 101 42 chr17 30715328 30715553 -54722927 - MIR SINE MIR -11 251 10 1917 111 3 31 chr17 30715575 30715903 -54722577 - AluSc SINE Alu 0 320 1 328 330 98 17 chr17 30716927 30717100 -54721380 + MIR3 SINE MIR 19 205 -3 1508 244 77 35 chr17 30717301 30717462 -54721018 + MLT1F LTR MaLR 4 157 -385 803 26 35 0 chr17 30717462 30717576 -54720904 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 1508 244 77 35 chr17 30717576 30717931 -54720549 + MLT1F LTR MaLR 157 542 0 382 319 30 7 chr17 30718347 30718482 -54719998 + MIR3 SINE MIR 30 167 -41 246 181 83 42 chr17 30718853 30718925 -54719555 + MER113 DNA MER1_type? 445 519 -2 348 324 126 32 chr17 30718986 30719390 -54719090 + L2 LINE L2 2451 2892 -422 305 339 146 37 chr17 30719465 30719760 -54718720 + L2 LINE L2 2942 3268 -4 1190 67 0 0 chr17 30720234 30720384 -54718096 + AluY SINE Alu 150 299 -12 1652 179 3 17 chr17 30720630 30720927 -54717553 - AluJo SINE Alu -14 298 6 536 244 53 84 chr17 30720991 30721253 -54717227 - MIR SINE MIR 0 262 9 180 382 24 0 chr17 30722383 30722506 -54715974 + L2 LINE L2 2634 2759 -555 782 255 34 10 chr17 30722937 30723145 -54715335 + MIR SINE MIR 50 262 0 529 301 0 0 chr17 30723829 30723962 -54714518 + MIR SINE MIR 99 231 -31 303 253 90 84 chr17 30724110 30724276 -54714204 + L3 LINE CR1 1407 1573 -4 814 250 83 0 chr17 30724356 30724572 -54713908 + MIR SINE MIR 2 235 -27 623 213 21 21 chr17 30724926 30725067 -54713413 - FLAM_C SINE Alu -1 142 2 1470 60 0 0 chr17 30726842 30727025 -54711455 - AluY SINE Alu -2 309 127 246 62 0 0 chr17 30727025 30727057 -54711423 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 999 85 0 0 chr17 30727057 30727187 -54711293 - AluYb8 SINE Alu -186 132 3 252 198 10 125 chr17 30727205 30727301 -54711179 - L2 LINE L2 -94 3219 3135 381 305 153 16 chr17 30727578 30727768 -54710712 - MIR SINE MIR 0 262 47 376 276 119 46 chr17 30728206 30728467 -54710013 + L1MC4a LINE L1 5685 5964 -157 245 151 19 0 chr17 30729187 30729240 -54709240 + (CA)n Simple_repeat Simple_repeat 2 55 0 198 270 0 0 chr17 30729337 30729400 -54709080 + CT-rich Low_complexity Low_complexity 1 63 0 256 203 14 0 chr17 30729933 30730002 -54708478 + L1MA8 LINE L1 6221 6290 -1 2674 176 67 75 chr17 30730061 30730792 -54707688 - LTR8A LTR ERV1 -2 725 1 805 316 64 18 chr17 30731076 30731358 -54707122 + LTR16C LTR ERVL 98 392 -99 306 241 138 17 chr17 30733801 30733917 -54704563 - MIR3 SINE MIR -66 142 13 279 279 0 0 chr17 30734184 30734263 -54704217 + MIR SINE MIR 117 195 -67 226 164 36 18 chr17 30734815 30734870 -54703610 + L2 LINE L2 3258 3313 0 532 238 57 66 chr17 30735379 30735456 -54703024 + MER112 DNA MER1_type 5 81 -179 593 189 44 56 chr17 30735456 30735636 -54702844 + MER104 DNA MER2_type 3 180 0 532 238 57 66 chr17 30735636 30735785 -54702695 + MER112 DNA MER1_type 81 229 -31 338 359 51 5 chr17 30735984 30736179 -54702301 + MIR SINE MIR 58 261 -1 266 291 0 0 chr17 30737225 30737304 -54701176 + (TAGG)n Simple_repeat Simple_repeat 4 82 0 195 214 0 0 chr17 30737461 30737503 -54700977 - MIR SINE MIR -114 148 107 475 336 56 22 chr17 30738183 30738415 -54700065 - MIR SINE MIR -17 245 6 251 371 48 6 chr17 30739494 30739661 -54698819 + MIR SINE MIR 89 262 0 200 356 0 0 chr17 30739941 30740014 -54698466 + (TG)n Simple_repeat Simple_repeat 2 74 0 201 368 13 0 chr17 30740651 30740727 -54697753 + L2 LINE L2 2544 2620 -694 311 290 21 0 chr17 30740734 30740827 -54697653 + L2 LINE L2 3219 3313 0 5805 198 45 13 chr17 30741203 30743421 -54695059 + L1MD1 LINE L1 3938 6242 0 180 0 0 0 chr17 30743465 30743485 -54694995 + (CA)n Simple_repeat Simple_repeat 2 21 0 622 201 41 96 chr17 30743496 30743715 -54694765 + L1MD3 LINE L1 7789 7995 0 788 297 55 0 chr17 30744706 30744942 -54693538 - MIR SINE MIR 0 262 14 300 287 68 17 chr17 30745257 30745431 -54693049 + MIR SINE MIR 10 190 -67 235 297 94 14 chr17 30745578 30745716 -54692764 + L2 LINE L2 3006 3154 -159 265 325 60 0 chr17 30746210 30746327 -54692153 - MIR SINE MIR -30 232 109 251 279 116 23 chr17 30746387 30746516 -54691964 + MIR SINE MIR 101 241 -21 762 174 7 7 chr17 30747188 30747326 -54691154 + FLAM_C SINE Alu 6 143 0 189 312 123 14 chr17 30747511 30747649 -54690831 + MIR SINE MIR 89 241 -21 200 111 28 0 chr17 30748592 30748628 -54689852 + GA-rich Low_complexity Low_complexity 2 38 0 230 294 184 15 chr17 30748902 30749038 -54689442 + L2 LINE L2 2926 3084 -188 198 0 0 0 chr17 30750094 30750116 -54688364 + (A)n Simple_repeat Simple_repeat 1 22 0 1411 185 85 48 chr17 30750796 30751051 -54687429 - MLT1A1 LTR MaLR 0 365 92 1968 138 3 26 chr17 30751051 30751356 -54687124 + AluSx SINE Alu 1 298 -14 1411 185 85 48 chr17 30751356 30751452 -54687028 - MLT1A1 LTR MaLR -273 92 1 3524 121 27 109 chr17 30751635 30751925 -54686555 - Tigger3(Golem) DNA MER2_type 0 3029 2717 2326 60 0 7 chr17 30751925 30752209 -54686271 + AluY SINE Alu 1 282 -29 3524 121 27 109 chr17 30752209 30752267 -54686213 - Tigger3(Golem) DNA MER2_type -312 2717 2656 715 205 87 0 chr17 30752267 30752428 -54686052 + FAM SINE Alu 1 175 0 3524 121 27 109 chr17 30752428 30752831 -54685649 - Tigger3(Golem) DNA MER2_type -373 2656 2339 1915 159 74 0 chr17 30752836 30753162 -54685318 - Tigger3(Golem) DNA MER2_type -2679 350 1 210 310 0 0 chr17 30753826 30753884 -54684596 + MIR SINE MIR 78 135 -73 431 322 20 14 chr17 30754397 30754543 -54683937 - MIR SINE MIR -50 212 66 378 257 44 0 chr17 30754545 30754658 -54683822 + MIR SINE MIR 119 236 -26 2204 115 0 7 chr17 30754668 30755013 -54683467 + AluSx SINE Alu 1 312 0 309 151 0 0 chr17 30755046 30755099 -54683381 + CT-rich Low_complexity Low_complexity 2 54 0 473 304 36 6 chr17 30755445 30755613 -54682867 - MIR SINE MIR -70 192 20 235 358 63 31 chr17 30756414 30756668 -54681812 + L2 LINE L2 2831 3092 -180 1302 261 41 22 chr17 30756788 30757202 -54681278 + Charlie7 DNA MER1_type 35 456 -2156 237 345 149 6 chr17 30757503 30757671 -54680809 - MIR SINE MIR -56 206 15 535 242 34 20 chr17 30758952 30759101 -54679379 - MIR SINE MIR -2 260 110 196 121 0 0 chr17 30759403 30759436 -54679044 - L2 LINE L2 -10 3303 3271 2296 153 52 28 chr17 30759933 30760097 -54678383 + Tigger2a DNA MER2_type 1 160 -2548 2776 132 14 5 chr17 30760097 30760521 -54677959 - MSTA LTR MaLR 0 428 1 2296 153 52 28 chr17 30760521 30760780 -54677700 + Tigger2a DNA MER2_type 160 434 0 325 336 29 0 chr17 30761198 30761335 -54677145 + L1MC/D LINE L1 5585 5725 -2083 23 0 0 0 chr17 30762016 30762039 -54676441 + AT_rich Low_complexity Low_complexity 1 23 0 572 272 112 16 chr17 30762106 30762429 -54676051 - HAL1 LINE L1 -111 2396 2043 287 361 58 23 chr17 30762873 30763178 -54675302 - L2 LINE L2 -220 3052 2740 201 309 62 25 chr17 30763346 30763427 -54675053 - MIR3 SINE MIR -1 207 124 256 263 25 12 chr17 30763447 30763527 -54674953 + L1M LINE L1 5321 5401 -2407 248 232 15 0 chr17 30764267 30764341 -54674139 + L1 LINE L1 4769 4843 -1303 1777 185 25 35 chr17 30764550 30764950 -54673530 + MER7C DNA MER2_type 1 396 -206 1340 150 0 0 chr17 30765397 30765597 -54672883 + MER7C DNA MER2_type 400 599 -13 207 204 0 0 chr17 30765619 30765668 -54672812 + (CA)n Simple_repeat Simple_repeat 2 50 0 499 267 66 27 chr17 30765855 30766113 -54672367 + L1MC/D LINE L1 5261 5528 -2280 2105 71 41 34 chr17 30767204 30767498 -54670982 - AluY SINE Alu -15 296 1 3185 172 190 81 chr17 30767755 30768674 -54669806 + LTR28 LTR ERV1 1 1020 0 1229 167 122 45 chr17 30768918 30769205 -54669275 - MLT1A1 LTR MaLR -54 311 3 311 288 91 15 chr17 30769491 30769623 -54668857 + MIR SINE MIR 104 245 -17 198 91 0 0 chr17 30769629 30769662 -54668818 + (TTG)n Simple_repeat Simple_repeat 1 33 0 255 286 48 12 chr17 30770439 30770523 -54667957 - MIR SINE MIR -127 135 49 951 67 0 0 chr17 30770895 30771014 -54667466 + AluY SINE Alu 180 298 -13 2419 157 36 19 chr17 30771302 30771717 -54666763 + MSTC LTR MaLR 1 422 -6 2192 87 35 0 chr17 30771788 30771954 -54666526 - AluY SINE Alu -14 297 115 233 29 0 29 chr17 30771954 30771989 -54666491 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2192 87 35 0 chr17 30771989 30772109 -54666371 - AluY SINE Alu -196 115 1 910 250 151 19 chr17 30772273 30772585 -54665895 - MLT1I LTR MaLR 0 409 57 383 325 17 0 chr17 30772835 30772952 -54665528 - L2 LINE L2 -1 3271 3153 339 271 107 8 chr17 30772998 30773120 -54665360 + MIR3 SINE MIR 3 136 -72 484 257 53 5 chr17 30775265 30775452 -54663028 - Zaphod DNA AcHobo 0 4031 3836 198 191 0 0 chr17 30775474 30775516 -54662964 + (TA)n Simple_repeat Simple_repeat 2 43 0 280 305 0 15 chr17 30775534 30775665 -54662815 + (TA)n Simple_repeat Simple_repeat 2 130 0 1579 179 23 29 chr17 30775683 30776032 -54662448 - Zaphod DNA AcHobo -180 3851 3505 779 170 23 2 chr17 30776032 30776176 -54662304 - MSTC LTR MaLR 0 428 213 3297 220 118 47 chr17 30776176 30777186 -54661294 - MSTC-int LTR MaLR -646 1089 6 1213 208 0 0 chr17 30777204 30777411 -54661069 - MSTC LTR MaLR -1 427 221 208 200 0 0 chr17 30777788 30777828 -54660652 + MIR SINE MIR 223 262 0 322 192 313 0 chr17 30779327 30779426 -54659054 + MIR SINE MIR 116 245 -17 785 275 198 22 chr17 30779974 30780389 -54658091 - L2 LINE L2 0 3313 2826 1959 151 0 16 chr17 30780463 30780803 -54657677 - AluJb SINE Alu 0 312 2 3759 116 61 5 chr17 30781226 30781796 -54656684 + LTR43 LTR ERV1 1 602 0 280 287 120 42 chr17 30781803 30781970 -54656510 + MIR3 SINE MIR 15 194 -14 1973 214 46 30 chr17 30782502 30782998 -54655482 + MLT1D LTR MaLR 1 504 -1 237 215 83 107 chr17 30783004 30783125 -54655355 - HAL1 LINE L1 -55 2452 2335 206 244 0 0 chr17 30783210 30783251 -54655229 + (CATATA)n Simple_repeat Simple_repeat 3 43 0 287 83 0 21 chr17 30783341 30783389 -54655091 + (TA)n Simple_repeat Simple_repeat 1 47 0 1509 181 11 14 chr17 30783389 30783676 -54654804 - AluJb SINE Alu -26 286 1 3062 277 133 48 chr17 30783698 30785665 -54652815 - HAL1 LINE L1 -365 2142 9 823 200 45 55 chr17 30786410 30786610 -54651870 + MLT1D LTR MaLR 1 198 -307 740 210 93 19 chr17 30786584 30786798 -54651682 + MLT1A1 LTR MaLR 136 365 0 * 181 200 0 29 chr17 30787031 30787066 -54651414 - L3 LINE CR1 -112 1465 1432 374 341 24 78 chr17 30787433 30787729 -54650751 - L2 LINE L2 0 3272 2993 250 301 94 28 chr17 30787785 30787943 -54650537 - MIR3 SINE MIR -8 200 35 804 189 0 24 chr17 30788091 30788260 -54650220 - FRAM SINE Alu -4 172 8 1864 147 177 11 chr17 30788657 30789024 -54649456 - MSTA LTR MaLR 0 428 1 300 303 10 40 chr17 30789374 30789473 -54649007 + L1MC4a LINE L1 5983 6078 -1730 383 186 0 47 chr17 30789496 30789582 -54648898 + MER20 DNA MER1_type 57 138 -81 695 141 8 16 chr17 30789598 30789719 -54648761 + AluJb SINE Alu 5 124 -188 614 340 53 5 chr17 30791763 30791972 -54646508 - MIR SINE MIR -17 245 27 958 147 35 56 chr17 30794965 30795162 -54643318 + MLT1C LTR MaLR 1 193 -274 1469 158 0 24 chr17 30795175 30795428 -54643052 + AluJo SINE Alu 52 298 -14 910 188 0 0 chr17 30795432 30795592 -54642888 + AluJb SINE Alu 138 297 -15 1753 94 4 0 chr17 30795601 30795836 -54642644 + AluY SINE Alu 1 236 -75 782 209 34 28 chr17 30795836 30796013 -54642467 + MLT1C LTR MaLR 290 467 0 2298 72 0 20 chr17 30796602 30796906 -54641574 + AluY SINE Alu 1 298 -13 182 295 16 0 chr17 30796967 30797028 -54641452 - MIR3 SINE MIR -41 167 106 319 233 101 78 chr17 30797035 30797164 -54641316 - L2 LINE L2 -14 3299 3168 251 152 0 22 chr17 30797434 30797480 -54641000 - MLT1L LTR MaLR -363 252 208 1139 162 35 5 chr17 30797516 30797714 -54640766 + MER20 DNA MER1_type 16 219 0 291 317 97 14 chr17 30797715 30797860 -54640620 - MLT1L LTR MaLR -417 198 42 590 185 140 13 chr17 30798008 30798165 -54640315 - MER69 DNA AcHobo 0 2526 2350 212 274 0 48 chr17 30798968 30799030 -54639450 + MIR SINE MIR 118 176 -86 696 301 42 36 chr17 30799104 30799521 -54638959 + L2 LINE L2 2852 3269 -3 465 225 0 0 chr17 30799985 30800074 -54638406 + MIR SINE MIR 61 149 -59 351 0 0 0 chr17 30800492 30800531 -54637949 + (TG)n Simple_repeat Simple_repeat 1 39 0 4125 130 15 21 chr17 30800656 30801319 -54637161 - Tigger1 DNA MER2_type -355 2063 1405 * 6641 179 41 25 chr17 30801305 30801532 -54636948 - Tigger1 DNA MER2_type -1228 1190 968 1483 180 169 21 chr17 30801532 30801905 -54636575 - MSTA LTR MaLR 0 428 1 6641 179 41 25 chr17 30801905 30802840 -54635640 - Tigger1 DNA MER2_type -1450 968 9 1883 129 7 0 chr17 30802846 30803125 -54635355 + AluJb SINE Alu 4 284 -28 22 35 0 0 chr17 30803125 30803154 -54635326 + AT_rich Low_complexity Low_complexity 1 29 0 395 203 32 98 chr17 30803544 30803667 -54634813 - MIR SINE MIR 0 262 148 337 283 19 36 chr17 30803760 30803917 -54634563 - MIR3 SINE MIR -63 145 1 466 300 69 6 chr17 30804045 30804205 -54634275 + MIR SINE MIR 72 241 -21 2119 98 0 3 chr17 30804522 30804817 -54633663 + AluSc SINE Alu 1 294 -15 210 389 8 24 chr17 30804818 30804944 -54633536 + MER5A DNA MER1_type 65 188 -1 277 256 94 34 chr17 30805058 30805175 -54633305 - L3 LINE CR1 -3 1574 1451 * 454 236 47 0 chr17 30805165 30805271 -54633209 + MIR3 SINE MIR 91 201 -7 350 393 7 0 chr17 30805718 30805863 -54632617 - MIR SINE MIR -25 237 92 205 267 0 0 chr17 30807421 30807466 -54631014 + (TG)n Simple_repeat Simple_repeat 2 46 0 213 121 0 0 chr17 30809316 30809349 -54629131 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 337 253 35 0 chr17 30809983 30810070 -54628410 - MIR SINE MIR -19 243 154 1519 197 59 51 chr17 30810087 30810462 -54628018 + MLT1D LTR MaLR 1 378 -127 249 33 0 0 chr17 30810499 30810529 -54627951 + (A)n Simple_repeat Simple_repeat 1 30 0 632 224 0 7 chr17 30811025 30811168 -54627312 + MLT1D LTR MaLR 364 505 0 254 356 0 5 chr17 30811184 30811277 -54627203 - MIR SINE MIR -116 92 2 202 182 0 0 chr17 30811470 30811503 -54626977 + polypyrimidine Low_complexity Low_complexity 1 33 0 1116 117 21 16 chr17 30811765 30811953 -54626527 + MER53 DNA DNA 1 189 0 216 264 165 58 chr17 30812551 30812672 -54625808 - L2 LINE L2 -2 3311 3178 1469 227 85 56 chr17 30812914 30813145 -54625335 - MLT1F LTR MaLR -2 540 317 2791 3 0 0 chr17 30813145 30813453 -54625027 - AluYa5 SINE Alu -3 308 1 1469 227 85 56 chr17 30813453 30813737 -54624743 - MLT1F LTR MaLR -225 317 10 1547 197 61 83 chr17 30813738 30814210 -54624270 - MLT1C LTR MaLR 0 467 6 679 262 42 23 chr17 30814765 30815072 -54623408 + L1ME3 LINE L1 5650 5956 -206 1061 140 0 29 chr17 30815319 30815490 -54622990 - FRAM SINE Alu 0 166 1 1490 213 3 14 chr17 30815494 30815810 -54622670 - AluJo SINE Alu 0 313 1 569 317 90 50 chr17 30816417 30816916 -54621564 + L2 LINE L2 2377 2895 -419 233 250 19 0 chr17 30817084 30817136 -54621344 + L2 LINE L2 3006 3058 -255 193 308 243 9 chr17 30817327 30817434 -54621046 + L2 LINE L2 3136 3267 -5 345 274 59 39 chr17 30818254 30818407 -54620073 + MIR SINE MIR 107 262 0 1146 164 35 21 chr17 30818536 30818809 -54619671 + MER2 DNA MER2_type 1 315 -30 269 313 30 10 chr17 30819922 30820021 -54618459 - MER91B DNA MER1_type 0 190 90 412 252 84 8 chr17 30820039 30820158 -54618322 - MER91B DNA MER1_type -61 129 2 1207 213 21 21 chr17 30820398 30820685 -54617795 - AluJo SINE Alu -22 290 4 275 302 0 0 chr17 30821416 30821479 -54617001 + MIR SINE MIR 84 146 -62 225 169 0 0 chr17 30821743 30821802 -54616678 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 692 245 25 92 chr17 30821853 30822135 -54616345 + MLT1I LTR MaLR 93 355 -54 364 153 17 0 chr17 30822133 30822192 -54616288 - AluSp SINE Alu -106 197 138 * 819 311 42 0 chr17 30822192 30822433 -54616047 - L2 LINE L2 -230 3083 2833 1429 245 56 80 chr17 30822435 30822553 -54615927 + L1ME3 LINE L1 5173 5292 -870 2538 103 19 8 chr17 30822553 30822913 -54615567 + THE1B LTR MaLR 1 364 0 1429 245 56 80 chr17 30822913 30822991 -54615489 + L1ME3 LINE L1 5292 5370 -792 1353 178 39 45 chr17 30822991 30823300 -54615180 + AluJo SINE Alu 1 307 -5 1429 245 56 80 chr17 30823300 30823844 -54614636 + L1ME3 LINE L1 5370 5901 -261 1767 164 0 0 chr17 30823844 30824137 -54614343 - AluSx SINE Alu -19 293 1 1429 245 56 80 chr17 30824137 30824392 -54614088 + L1ME3 LINE L1 5901 6161 -1 739 293 115 42 chr17 30824432 30824463 -54614017 - L2 LINE L2 -499 2815 2788 2412 115 28 33 chr17 30824463 30824827 -54613653 + THE1B LTR MaLR 1 362 -2 739 293 115 42 chr17 30824827 30825300 -54613180 - L2 LINE L2 -526 2788 2274 258 81 0 0 chr17 30825338 30825375 -54613105 + (CA)n Simple_repeat Simple_repeat 2 38 0 200 317 49 40 chr17 30825944 30826072 -54612408 + MIR SINE MIR 26 142 -66 323 285 91 42 chr17 30826640 30826907 -54611573 + MLT1F1 LTR MaLR 201 517 -50 192 324 28 14 chr17 30827666 30827737 -54610743 - MIR3 SINE MIR -48 160 89 2234 148 89 8 chr17 30827927 30828320 -54610160 + MSTA LTR MaLR 1 425 -3 2397 165 24 21 chr17 30829506 30829931 -54608549 - MSTB LTR MaLR 0 426 1 661 303 41 5 chr17 30830030 30830225 -54608255 + MIR SINE MIR 25 226 -36 209 346 13 0 chr17 30830268 30830346 -54608134 - MIR SINE MIR -108 154 76 24 0 0 0 chr17 30830476 30830500 -54607980 + AT_rich Low_complexity Low_complexity 1 24 0 180 179 0 0 chr17 30831528 30831567 -54606913 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 763 284 28 0 chr17 30832510 30832728 -54605752 + L1MC/D LINE L1 5574 5797 -2011 2061 125 0 4 chr17 30832832 30833113 -54605367 - AluSq SINE Alu -33 280 1 27 49 0 0 chr17 30833256 30833297 -54605183 + AT_rich Low_complexity Low_complexity 1 41 0 495 243 28 0 chr17 30833541 30833648 -54604832 - MER81 DNA DNA -3 111 2 206 267 186 0 chr17 30833765 30833851 -54604629 + MIR SINE MIR 63 164 -98 720 302 200 8 chr17 30833874 30834364 -54604116 + L2 LINE L2 975 1558 -1756 1688 179 47 47 chr17 30834733 30835114 -54603366 + MLT1B LTR MaLR 10 390 0 626 328 139 17 chr17 30835114 30835516 -54602964 + L2 LINE L2 2863 3313 0 226 318 210 9 chr17 30835805 30836038 -54602442 - L3 LINE CR1 -23 1554 1275 213 121 0 0 chr17 30836104 30836137 -54602343 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 186 156 0 0 chr17 30836284 30836316 -54602164 + L2 LINE L2 3282 3313 0 455 270 24 41 chr17 30837072 30837098 -54601382 - L1MA2 LINE L1 -302 5819 5794 370 237 11 0 chr17 30837098 30837191 -54601289 - L1MA10 LINE L1 -1 6333 6240 455 270 24 41 chr17 30837191 30837432 -54601048 - L1MA2 LINE L1 -327 5794 5589 372 281 48 14 chr17 30837728 30837874 -54600606 + MIR SINE MIR 100 250 -12 200 233 17 0 chr17 30838122 30838182 -54600298 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 228 362 184 7 chr17 30838355 30838496 -54599984 - L3 LINE CR1 -37 1540 1375 694 246 58 8 chr17 30838637 30838877 -54599603 + LTR16C LTR ERVL 223 474 -17 293 275 37 22 chr17 30839490 30839595 -54598885 + MIR SINE MIR 5 111 -106 920 107 0 37 chr17 30839971 30840158 -54598322 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 296 96 39 0 chr17 30840159 30840211 -54598269 + GA-rich Low_complexity Low_complexity 3 56 0 2520 113 16 11 chr17 30840591 30840964 -54597516 - THE1C LTR MaLR 0 375 1 1618 185 47 22 chr17 30843447 30843766 -54594714 + L1M4b LINE L1 2 328 -6531 1405 204 50 62 chr17 30843770 30844191 -54594289 + MLT2C2 LTR ERVL 1 416 -48 4208 212 160 12 chr17 30844191 30845426 -54593054 + L1M4b LINE L1 430 1834 -5021 432 231 9 46 chr17 30845429 30845537 -54592943 + L1M4b LINE L1 156 259 -6600 337 197 0 56 chr17 30845537 30845608 -54592872 - MLT2D LTR ERVL -119 295 229 323 253 46 0 chr17 30845589 30845676 -54592804 - MLT2D LTR ERVL -118 296 206 * 1732 249 28 34 chr17 30845677 30846412 -54592068 + L1M4b LINE L1 1859 2723 -4415 233 281 98 0 chr17 30846596 30846678 -54591802 + L1MC4 LINE L1 6614 6703 -1339 228 227 0 82 chr17 30846687 30846797 -54591683 + L1MC4 LINE L1 6603 6703 -1339 360 189 0 0 chr17 30846802 30846876 -54591604 + (TA)n Simple_repeat Simple_repeat 1 74 0 1577 238 88 8 chr17 30846888 30847368 -54591112 + L1M4b LINE L1 3264 3781 -3176 1976 150 10 0 chr17 30847566 30847866 -54590614 - AluJb SINE Alu -9 303 1 205 272 37 56 chr17 30848012 30848137 -54590343 - MIR SINE MIR -87 121 35 465 317 47 29 chr17 30848326 30848496 -54589984 - MIR SINE MIR -65 143 6 228 226 87 70 chr17 30850548 30850663 -54587817 + MIR SINE MIR 36 152 -56 182 297 110 22 chr17 30851783 30851874 -54586606 - MIR3 SINE MIR -28 180 82 219 88 0 0 chr17 30852277 30852311 -54586169 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 182 279 105 12 chr17 30852396 30852482 -54585998 - L2 LINE L2 -56 3216 3123 27 29 0 0 chr17 30852553 30852587 -54585893 + AT_rich Low_complexity Low_complexity 1 34 0 4022 147 7 98 chr17 30852751 30853704 -54584776 + L1MC2 LINE L1 5189 6044 -300 1250 67 0 0 chr17 30853805 30853955 -54584525 + AluY SINE Alu 157 306 -5 1588 236 63 16 chr17 30853971 30854399 -54584081 + MLT1D LTR MaLR 58 505 0 1020 222 20 20 chr17 30855776 30856024 -54582456 - MLT1D LTR MaLR 0 505 258 550 159 0 23 chr17 30856317 30856405 -54582075 + AluS SINE Alu 6 91 -222 1600 248 72 39 chr17 30856604 30857143 -54581337 + Zaphod DNA AcHobo 38 558 -3473 198 103 0 0 chr17 30857143 30857172 -54581308 + (TG)n Simple_repeat Simple_repeat 2 30 0 1600 248 72 39 chr17 30857172 30857442 -54581038 + Zaphod DNA AcHobo 558 3509 -522 499 104 0 0 chr17 30857442 30857509 -54580971 + MSTC LTR MaLR 1 67 -361 362 258 80 54 chr17 30857668 30857873 -54580607 + MIR SINE MIR 40 250 -12 1924 134 0 42 chr17 30858533 30858839 -54579641 - AluJo SINE Alu -14 298 6 340 322 4 61 chr17 30858850 30859034 -54579446 - MIR SINE MIR -62 146 13 751 217 7 0 chr17 30859151 30859303 -54579177 + MER117 DNA MER1_type 1 153 -44 545 258 55 82 chr17 30859344 30859673 -54578807 - MLT1J LTR MaLR -191 320 1 349 310 99 0 chr17 30860064 30860206 -54578274 - MIR3 SINE MIR -20 188 33 193 191 21 32 chr17 30860460 30860554 -54577926 + (TG)n Simple_repeat Simple_repeat 1 93 0 2204 132 0 0 chr17 30860727 30861030 -54577450 + AluSx SINE Alu 1 303 -9 1756 178 53 12 chr17 30861034 30861371 -54577109 + MLT1A1 LTR MaLR 10 360 -5 367 93 0 0 chr17 30861379 30861433 -54577047 - MER53 DNA DNA -1 188 135 23 0 0 0 chr17 30861727 30861750 -54576730 + AT_rich Low_complexity Low_complexity 1 23 0 314 265 0 0 chr17 30863383 30863451 -54575029 + MARNA DNA Mariner 317 384 -202 246 307 50 36 chr17 30863527 30863667 -54574813 + MIR SINE MIR 56 197 -65 279 221 12 70 chr17 30863855 30863941 -54574539 + L2 LINE L2 3187 3267 -5 691 285 39 43 chr17 30864623 30864844 -54573636 - MIR SINE MIR -6 256 35 2130 135 0 0 chr17 30864844 30865147 -54573333 - AluSx SINE Alu -9 303 1 691 285 39 43 chr17 30865147 30865181 -54573299 - MIR SINE MIR -227 35 2 382 306 0 9 chr17 30865726 30865834 -54572646 + MIR SINE MIR 46 152 -110 391 307 71 13 chr17 30866692 30866917 -54571563 + L2 LINE L2 2456 2693 -621 1192 246 45 5 chr17 30866920 30867298 -54571182 - L1M4 LINE L1 -872 5274 4882 1659 163 18 7 chr17 30867325 30867602 -54570878 + AluJb SINE Alu 1 280 -32 630 283 111 7 chr17 30867632 30868125 -54570355 + L2 LINE L2 2702 3244 -69 * 797 261 17 13 chr17 30868123 30868353 -54570127 + MIR SINE MIR 14 244 -18 250 246 184 18 chr17 30868631 30868745 -54569735 + MIR3 SINE MIR 48 180 -28 278 286 112 18 chr17 30868995 30869177 -54569303 + MIR SINE MIR 36 232 -30 217 338 0 15 chr17 30869193 30869261 -54569219 + MER5A DNA MER1_type 86 152 -37 1267 172 34 40 chr17 30869343 30869669 -54568811 - MER33 DNA MER1_type 0 324 1 444 250 61 75 chr17 30869853 30869867 -54568613 - MIR SINE MIR -51 211 198 2505 130 5 20 chr17 30869867 30870260 -54568220 + MLT1B LTR MaLR 1 387 -3 444 250 61 75 chr17 30870260 30870457 -54568023 - MIR SINE MIR -64 198 3 303 307 7 44 chr17 30870859 30870996 -54567484 - MIR SINE MIR -109 153 22 21 36 0 0 chr17 30871440 30871468 -54567012 + AT_rich Low_complexity Low_complexity 1 28 0 2540 134 51 5 chr17 30872626 30872804 -54565676 + MSTA LTR MaLR 1 169 -259 6410 75 13 8 chr17 30872804 30873922 -54564558 + L1PA8A LINE L1 5008 6130 -1 2540 134 51 5 chr17 30873922 30874152 -54564328 + MSTA LTR MaLR 169 428 0 260 308 131 8 chr17 30874179 30874309 -54564171 - MIR SINE MIR 0 262 117 351 0 0 0 chr17 30874341 30874380 -54564100 + (CA)n Simple_repeat Simple_repeat 1 39 0 3604 244 74 11 chr17 30874403 30875438 -54563042 + MER69B DNA AcHobo 43 1143 -83 252 215 89 63 chr17 30875485 30875564 -54562916 + MLT2C1 LTR ERVL 277 357 -40 282 91 0 23 chr17 30875610 30875654 -54562826 + MLT2F LTR ERVL 619 661 -2 496 307 96 9 chr17 30875699 30875917 -54562563 - MIR SINE MIR -11 251 15 232 240 40 30 chr17 30876130 30876230 -54562250 - MIR3 SINE MIR -4 204 104 211 229 0 0 chr17 30876575 30876623 -54561857 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1922 156 3 7 chr17 30876678 30876985 -54561495 - AluJo SINE Alu -6 306 1 286 291 86 6 chr17 30877016 30877161 -54561319 - MIR SINE MIR -63 145 2 225 320 149 11 chr17 30877694 30877869 -54560611 + MIR SINE MIR 21 219 -43 195 276 26 26 chr17 30878159 30878235 -54560245 - MIR SINE MIR -34 228 153 238 305 59 34 chr17 30878433 30878551 -54559929 - MIR SINE MIR -110 152 32 373 295 114 20 chr17 30879713 30879862 -54558618 + MIR3 SINE MIR 3 165 -43 622 318 70 16 chr17 30880123 30880381 -54558099 + LTR16A LTR ERVL 170 441 -9 232 362 55 12 chr17 30881133 30881322 -54557158 + MIR3 SINE MIR 5 202 -60 295 350 10 0 chr17 30881677 30881777 -54556703 + MIR SINE MIR 31 131 -77 209 347 42 11 chr17 30881932 30882027 -54556453 + L2 LINE L2 3198 3295 -18 338 355 51 10 chr17 30882054 30882251 -54556229 - L2 LINE L2 -219 3053 2849 366 186 9 18 chr17 30884086 30884199 -54554281 + CT-rich Low_complexity Low_complexity 1 112 0 1368 23 11 6 chr17 30884232 30884409 -54554071 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 508 241 36 0 chr17 30884632 30884744 -54553736 - MER91C DNA MER1_type -4 136 21 180 250 0 54 chr17 30885218 30885274 -54553206 - MIR SINE MIR -191 71 19 207 261 31 0 chr17 30885456 30885521 -54552959 + MER5A DNA MER1_type 50 116 -73 457 273 171 11 chr17 30885650 30885837 -54552643 - MIR SINE MIR -43 219 3 459 281 83 23 chr17 30886358 30886569 -54551911 + MIR SINE MIR 36 253 -9 645 190 82 92 chr17 30886600 30886784 -54551696 - MER3 DNA MER1_type -6 203 22 579 214 0 0 chr17 30886918 30887016 -54551464 + Tigger3(Golem) DNA MER2_type 2931 3028 -1 231 36 0 0 chr17 30888174 30888202 -54550278 + (T)n Simple_repeat Simple_repeat 1 28 0 1118 133 35 71 chr17 30939914 30940140 -54498340 + MER20 DNA MER1_type 1 218 -1 314 237 0 0 chr17 30941126 30941202 -54497278 + MIR SINE MIR 47 122 -140 285 310 30 0 chr17 30941469 30941569 -54496911 + MER3 DNA MER1_type 52 154 -55 286 171 13 40 chr17 30941591 30941667 -54496813 + MER3 DNA MER1_type 2237 2310 0 660 179 22 71 chr17 30942664 30942848 -54495632 + MER5B DNA MER1_type 4 178 0 313 262 35 90 chr17 30942908 30943053 -54495427 - MIR SINE MIR -68 194 58 321 118 0 0 chr17 30943213 30943264 -54495216 + (CA)n Simple_repeat Simple_repeat 1 51 0 253 263 63 11 chr17 30943889 30943984 -54494496 - MER117 DNA MER1_type -26 171 72 379 287 35 17 chr17 30944058 30944173 -54494307 - MIR SINE MIR -116 146 30 186 287 47 93 chr17 30944240 30944390 -54494090 + L2 LINE L2 2973 3115 -157 239 0 32 0 chr17 30945752 30945783 -54492697 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2545 62 3 0 chr17 30945814 30946123 -54492357 - AluY SINE Alu -1 310 1 508 168 10 10 chr17 30948141 30948242 -54490238 - MIR3 SINE MIR -7 201 101 185 287 108 32 chr17 30948445 30948602 -54489878 - L2 LINE L2 -172 3100 2932 222 91 0 0 chr17 30948727 30948760 -54489720 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 360 261 194 0 chr17 30948795 30948929 -54489551 - MIR SINE MIR -57 205 46 431 230 115 0 chr17 30949442 30949581 -54488899 - MER5B DNA MER1_type -17 161 7 1093 253 97 102 chr17 30950028 30950626 -54487854 - MLT1G1 LTR MaLR 0 595 1 425 265 108 16 chr17 30950725 30950888 -54487592 - MIR SINE MIR -49 213 30 1112 132 35 75 chr17 30950888 30951115 -54487365 + MER20 DNA MER1_type 1 218 -1 425 265 108 16 chr17 30951115 30951136 -54487344 - MIR SINE MIR -232 30 12 314 237 0 0 chr17 30952101 30952177 -54486303 + MIR SINE MIR 47 122 -140 559 244 0 8 chr17 30952444 30952567 -54485913 + MER3 DNA MER1_type 52 126 -83 1270 154 48 74 chr17 30952568 30952880 -54485600 + MER3 DNA MER1_type 2237 2540 0 26 82 0 0 chr17 30953032 30953093 -54485387 + AT_rich Low_complexity Low_complexity 1 61 0 658 218 0 16 chr17 30953104 30953228 -54485252 - FLAM_A SINE Alu -11 122 1 401 247 0 11 chr17 30953228 30953321 -54485159 + MER3 DNA MER1_type 2494 2585 0 307 279 49 16 chr17 30954393 30954515 -54483965 + MIR SINE MIR 51 176 -86 233 297 0 0 chr17 30955412 30955476 -54483004 + MIR SINE MIR 38 101 -107 253 289 9 61 chr17 30955569 30955683 -54482797 - MIR SINE MIR -152 110 3 45 55 0 0 chr17 30956778 30956851 -54481629 + AT_rich Low_complexity Low_complexity 1 73 0 469 282 24 53 chr17 30956862 30956997 -54481483 + MIR SINE MIR 4 132 -130 2227 89 120 3 chr17 30956997 30957323 -54481157 + THE1B LTR MaLR 1 364 0 469 282 24 53 chr17 30957323 30957393 -54481087 + MIR SINE MIR 132 203 -59 378 266 139 6 chr17 30958888 30959046 -54479434 - MIR3 SINE MIR -13 195 17 197 292 15 0 chr17 30959492 30959557 -54478923 + MIR SINE MIR 89 154 -108 2208 95 0 42 chr17 30959725 30960031 -54478449 - AluY SINE Alu -18 293 1 3920 75 6 0 chr17 30960097 30960607 -54477873 - L1PA8 LINE L1 -2 6170 5658 194 337 22 0 chr17 30961289 30961381 -54477099 + MIR SINE MIR 157 250 -12 1991 120 42 0 chr17 30961962 30962246 -54476234 - AluSg SINE Alu -10 300 5 23 68 0 0 chr17 30962296 30962340 -54476140 + AT_rich Low_complexity Low_complexity 1 44 0 300 266 43 106 chr17 30962350 30962538 -54475942 - L3 LINE CR1 -57 1520 1345 1814 102 0 0 chr17 30962942 30963187 -54475293 - L1PA8 LINE L1 -8 6164 5920 2210 113 10 3 chr17 30963217 30963526 -54474954 + AluSx SINE Alu 2 312 0 238 227 11 80 chr17 30965088 30965176 -54473304 + L1MB8 LINE L1 5594 5675 -489 294 261 25 56 chr17 30965274 30965435 -54473045 + L1MB8 LINE L1 5729 5884 -294 293 390 16 0 chr17 30965605 30965728 -54472752 + L2 LINE L2 3144 3268 -4 378 151 0 0 chr17 30965881 30965954 -54472526 + (TG)n Simple_repeat Simple_repeat 2 74 0 1581 193 9 25 chr17 30966164 30966480 -54472000 + AluJb SINE Alu 1 311 -1 306 303 110 18 chr17 30967371 30967480 -54471000 - L2 LINE L2 0 3313 3195 264 274 10 49 chr17 30967535 30967637 -54470843 + MIR SINE MIR 7 104 -158 292 294 34 42 chr17 30967957 30968076 -54470404 - MIR SINE MIR -143 119 2 831 151 16 0 chr17 30968209 30968335 -54470145 - AluJb SINE Alu -182 130 3 25 0 0 0 chr17 30968347 30968372 -54470108 + AT_rich Low_complexity Low_complexity 1 25 0 236 218 26 26 chr17 30968402 30968480 -54470000 + (TA)n Simple_repeat Simple_repeat 1 78 0 1553 140 33 8 chr17 30968506 30968749 -54469731 - AluSx SINE Alu -9 303 55 815 156 0 0 chr17 30968749 30968871 -54469609 - AluJb SINE Alu -190 122 1 292 200 17 0 chr17 30968871 30968931 -54469549 - MIR SINE MIR -76 186 126 325 206 0 0 chr17 30969031 30969094 -54469386 - MIR SINE MIR -99 163 101 2179 123 0 3 chr17 30969100 30969393 -54469087 + AluSg SINE Alu 1 292 -18 558 242 55 6 chr17 30971253 30971418 -54467062 + MER5B DNA MER1_type 1 173 -5 548 188 0 0 chr17 30971483 30971579 -54466901 - MER5A DNA MER1_type -84 105 10 607 165 43 0 chr17 30971980 30972094 -54466386 + LTR50 LTR ERVL 1 119 -676 325 264 23 11 chr17 30972094 30972181 -54466299 - MER81 DNA DNA 0 114 27 276 202 140 53 chr17 30972190 30972304 -54466176 + LTR50 LTR ERVL 109 232 -563 180 0 0 0 chr17 30972324 30972344 -54466136 + (CAG)n Simple_repeat Simple_repeat 1 20 0 461 267 157 13 chr17 30972427 30972663 -54465817 + LTR50 LTR ERVL 526 795 0 211 369 70 0 chr17 30972807 30972964 -54465516 - L2 LINE L2 -180 3092 2925 248 0 31 0 chr17 30973322 30973354 -54465126 + (CA)n Simple_repeat Simple_repeat 2 34 0 338 300 0 0 chr17 30973630 30973700 -54464780 + MER81 DNA DNA 1 70 -44 958 156 0 7 chr17 30974303 30974457 -54464023 - LTR32 LTR ERVL -2 469 317 254 108 0 0 chr17 30974599 30974636 -54463844 - LTR32 LTR ERVL -119 352 316 1701 185 44 47 chr17 30974638 30974979 -54463501 - LTR32 LTR ERVL -122 349 10 571 306 128 29 chr17 30974979 30975565 -54462915 + L3 LINE CR1 822 1465 -112 625 251 56 20 chr17 30975619 30975814 -54462666 + L2 LINE L2 3102 3303 -10 35 54 0 0 chr17 30976747 30976803 -54461677 + AT_rich Low_complexity Low_complexity 1 56 0 547 320 29 37 chr17 30977323 30977567 -54460913 - MIR SINE MIR -7 255 14 290 309 143 6 chr17 30977995 30978163 -54460317 + MIR SINE MIR 1 191 -71 1093 32 0 0 chr17 30979254 30979379 -54459101 - AluY SINE Alu -14 297 173 226 264 75 57 chr17 30979712 30979818 -54458662 + MIR SINE MIR 41 148 -60 245 299 117 15 chr17 30981385 30981522 -54456958 - MIR SINE MIR -49 213 63 577 302 19 15 chr17 30981850 30982055 -54456425 - MIR SINE MIR -51 211 6 401 308 89 14 chr17 30982265 30982479 -54456001 - L2 LINE L2 -482 2832 2603 186 43 0 0 chr17 30982821 30982844 -54455636 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 899 162 132 25 chr17 30984137 30984334 -54454146 - MER20 DNA MER1_type -1 218 1 191 191 71 0 chr17 30985899 30985941 -54452539 - MIR SINE MIR -32 230 186 200 392 108 0 chr17 30986227 30986329 -54452151 + L2 LINE L2 3158 3270 -2 240 320 72 10 chr17 30986359 30986456 -54452024 + MIR SINE MIR 38 140 -68 335 305 80 13 chr17 30987865 30988016 -54450464 + MIR SINE MIR 49 209 -53 345 131 0 0 chr17 30988148 30988209 -54450271 + (ATG)n Simple_repeat Simple_repeat 1 61 0 200 138 0 62 chr17 30988513 30988578 -54449902 + (GGAGAA)n Simple_repeat Simple_repeat 5 65 0 578 277 134 9 chr17 30988645 30988876 -54449604 + MIR SINE MIR 1 260 -2 574 224 6 6 chr17 30988897 30989076 -54449404 + (TAG)n Simple_repeat Simple_repeat 2 180 0 212 349 24 0 chr17 30990103 30990186 -54448294 - MIR3 SINE MIR -34 174 90 182 364 0 0 chr17 30991413 30991490 -54446990 + MIR3 SINE MIR 115 191 -17 232 358 0 0 chr17 30991543 30991610 -54446870 - L2 LINE L2 0 3272 3206 213 311 0 0 chr17 30991881 30991942 -54446538 + GA-rich Low_complexity Low_complexity 1 61 0 1511 167 44 34 chr17 30992211 30992505 -54445975 - AluJo SINE Alu -10 302 6 344 291 182 0 chr17 30992586 30992751 -54445729 + MIR SINE MIR 56 250 -12 266 290 0 0 chr17 30993390 30993452 -54445028 - L2 LINE L2 -42 3230 3169 391 289 107 53 chr17 30993499 30993873 -54444607 + L1ME4a LINE L1 5538 5931 -190 198 171 0 0 chr17 30993981 30994016 -54444464 - MIR SINE MIR -111 151 117 565 103 82 0 chr17 30994933 30995030 -54443450 - L1MA5 LINE L1 0 6300 6196 1312 247 28 32 chr17 30996180 30996419 -54442061 - MER113 DNA MER1_type? -89 432 194 2162 124 3 13 chr17 30996419 30996734 -54441746 - AluSp SINE Alu -1 312 1 1312 247 28 32 chr17 30996734 30996927 -54441553 - MER113 DNA MER1_type? -327 194 2 1235 21 0 0 chr17 30998147 30998289 -54440191 + L1HS LINE L1 6014 6155 0 1064 249 81 42 chr17 30998359 30998792 -54439688 - L1ME3A LINE L1 -95 6075 5626 477 228 84 71 chr17 30998836 30999094 -54439386 - L1ME LINE L1 -306 5860 5596 297 258 60 34 chr17 30999886 31000058 -54438422 - MIR SINE MIR -59 149 9 339 25 0 0 chr17 31000705 31000745 -54437735 + (TG)n Simple_repeat Simple_repeat 1 40 0 797 236 6 0 chr17 31000745 31000902 -54437578 - MER58A DNA MER1_type -25 199 42 4293 183 38 22 chr17 31000903 31001306 -54437174 + L1MB8 LINE L1 4918 5313 -865 1830 167 0 3 chr17 31001306 31001593 -54436887 + AluJo SINE Alu 1 286 -26 186 43 0 0 chr17 31001596 31001619 -54436861 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4293 183 38 22 chr17 31001619 31002445 -54436035 + L1MB8 LINE L1 5314 6173 -5 282 207 0 35 chr17 31002458 31002516 -54435964 - MER58A DNA MER1_type -168 56 1 183 387 54 9 chr17 31002526 31002637 -54435843 - L2 LINE L2 -40 3232 3117 234 0 0 0 chr17 31002750 31002776 -54435704 + (T)n Simple_repeat Simple_repeat 1 26 0 187 338 0 13 chr17 31002792 31002869 -54435611 - L2 LINE L2 -614 2700 2625 23 0 0 0 chr17 31002901 31002924 -54435556 + AT_rich Low_complexity Low_complexity 1 23 0 340 287 61 0 chr17 31003273 31003388 -54435092 + MIR SINE MIR 125 246 -16 248 296 17 43 chr17 31004921 31005036 -54433444 - L2 LINE L2 0 3272 3161 3193 159 7 25 chr17 31005036 31005633 -54432847 + LTR60 LTR ERV1 1 586 0 470 214 9 56 chr17 31006017 31006200 -54432280 + MIR SINE MIR 38 210 -52 1013 136 38 16 chr17 31007104 31007288 -54431192 - MER53 DNA DNA 0 189 2 219 235 20 0 chr17 31007983 31008034 -54430446 + L2 LINE L2 3261 3312 -1 25 0 0 0 chr17 31008807 31008832 -54429648 + AT_rich Low_complexity Low_complexity 1 25 0 296 298 90 56 chr17 31008851 31009029 -54429451 + MIR SINE MIR 8 191 -71 386 269 59 38 chr17 31009304 31009490 -54428990 - MIR SINE MIR -25 237 48 44174 46 6 1 chr17 31009938 31016052 -54422428 + L1PA4 LINE L1 1 6147 -8 198 0 0 0 chr17 31016071 31016093 -54422387 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 516 217 47 23 chr17 31016699 31016828 -54421652 - MIR SINE MIR -126 136 5 476 254 103 63 chr17 31016893 31017261 -54421219 + LTR33 LTR ERVL 38 456 -65 387 263 17 0 chr17 31018080 31018198 -54420282 + MIR SINE MIR 132 251 -11 268 335 65 27 chr17 31018286 31018471 -54420009 - MIR SINE MIR -51 211 20 191 381 0 0 chr17 31018520 31018583 -54419897 + L2 LINE L2 3000 3062 -210 211 350 32 32 chr17 31018703 31018826 -54419654 + L2 LINE L2 3133 3255 -17 425 252 66 64 chr17 31018837 31019149 -54419331 - MLT1I LTR MaLR -2 407 59 183 80 0 0 chr17 31019309 31019334 -54419146 + (CA)n Simple_repeat Simple_repeat 2 26 0 374 294 216 0 chr17 31019565 31019718 -54418762 + MER5A DNA MER1_type 4 189 0 257 292 101 77 chr17 31020025 31020361 -54418119 - L2 LINE L2 -12 3260 2917 259 189 38 0 chr17 31020652 31020705 -54417775 + Tigger5 DNA MER2_type 1 55 -2268 454 211 0 22 chr17 31020766 31020856 -54417624 - Tigger5 DNA MER2_type -2235 88 1 516 165 0 12 chr17 31020869 31020954 -54417526 + Tigger5 DNA MER2_type 2239 2322 -1 285 267 0 50 chr17 31020993 31021094 -54417386 - L2 LINE L2 -181 3091 2996 545 216 0 16 chr17 31021974 31022099 -54416381 - MIR3 SINE MIR 0 208 86 186 298 83 24 chr17 31022602 31022686 -54415794 - L2 LINE L2 -39 3233 3145 888 209 30 0 chr17 31022846 31023047 -54415433 - MER3 DNA MER1_type -1 208 2 253 319 174 0 chr17 31023227 31023434 -54415046 - MIR SINE MIR -6 256 14 851 305 53 30 chr17 31024851 31025244 -54413236 - L2 LINE L2 -16 3297 2896 350 263 70 9 chr17 31026127 31026241 -54412239 + MIR SINE MIR 26 146 -116 466 340 16 10 chr17 31026253 31026447 -54412033 + MER117 DNA MER1_type 1 195 -2 387 105 0 0 chr17 31027130 31027187 -54411293 + (TG)n Simple_repeat Simple_repeat 2 58 0 388 271 57 29 chr17 31027331 31027471 -54411009 + MIR SINE MIR 13 156 -106 206 339 21 23 chr17 31027811 31027906 -54410574 + MIR SINE MIR 27 122 -86 1962 136 0 0 chr17 31027957 31028229 -54410251 - AluSx SINE Alu -4 308 37 690 265 14 39 chr17 31028615 31028832 -54409648 + MIR SINE MIR 3 212 -50 285 344 49 8 chr17 31030182 31030304 -54408176 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 31030445 31030555 -54407925 - MARNA DNA Mariner -92 494 391 1429 231 53 11 chr17 31030954 31031023 -54407457 - L1MD3 LINE L1 -11 7984 7919 2153 106 0 3 chr17 31031023 31031324 -54407156 - AluY SINE Alu -11 300 1 1429 231 53 11 chr17 31031324 31031614 -54406866 - L1MD3 LINE L1 -76 7919 7610 703 47 0 0 chr17 31031849 31031934 -54406546 + AluY SINE Alu 215 299 -12 279 309 0 0 chr17 31031934 31032015 -54406465 + MARNA DNA Mariner 397 477 -109 396 175 25 12 chr17 31032151 31032231 -54406249 - L1MD3 LINE L1 -278 7717 7637 300 266 0 0 chr17 31032664 31032728 -54405752 + MER91 DNA MER1_type 77 140 0 209 323 111 10 chr17 31034296 31034395 -54404085 - L2 LINE L2 -26 3246 3138 198 395 0 0 chr17 31034432 31034508 -54403972 + MIR3 SINE MIR 133 208 0 372 270 95 0 chr17 31034982 31035119 -54403361 + LTR67 LTR ERVL 401 550 -7 541 183 98 46 chr17 31036234 31036387 -54402093 - MER103 DNA DNA -2 164 4 2425 77 3 0 chr17 31036673 31036985 -54401495 + AluSp SINE Alu 1 313 0 549 263 160 0 chr17 31037025 31037181 -54401299 + MER5A DNA MER1_type 9 189 0 480 303 67 0 chr17 31037191 31037356 -54401124 - MER5B DNA MER1_type -2 176 1 216 0 0 0 chr17 31037936 31037960 -54400520 + (T)n Simple_repeat Simple_repeat 1 24 0 250 290 0 16 chr17 31038023 31038085 -54400395 - MIR SINE MIR -182 80 20 1298 149 73 120 chr17 31038604 31038920 -54399560 - AluJb SINE Alu -1 301 1 222 279 0 39 chr17 31041190 31041294 -54397186 + GA-rich Low_complexity Low_complexity 2 101 0 189 383 21 0 chr17 31041576 31041670 -54396810 + L2 LINE L2 3208 3303 -10 1019 293 0 0 chr17 31042684 31042916 -54395564 + MIR SINE MIR 29 260 -2 399 232 320 31 chr17 31043036 31043230 -54395250 - MIR SINE MIR 0 262 13 707 344 59 11 chr17 31043244 31043514 -54394966 + L2 LINE L2 3025 3307 -6 184 234 52 13 chr17 31043610 31043687 -54394793 - L2 LINE L2 -252 3061 2982 423 295 68 14 chr17 31044038 31044245 -54394235 - MLT1J LTR MaLR -1 510 293 433 274 19 9 chr17 31044316 31044422 -54394058 - MLT1J LTR MaLR -332 179 73 2160 102 13 0 chr17 31044652 31044955 -54393525 + AluSp SINE Alu 1 307 -6 1658 132 49 3 chr17 31045005 31045314 -54393166 + AluSx SINE Alu 1 312 0 2192 73 7 0 chr17 31045491 31045778 -54392702 + AluSp SINE Alu 1 289 -24 194 0 0 37 chr17 31045788 31045815 -54392665 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 328 310 30 0 chr17 31045964 31046064 -54392416 + MIR SINE MIR 160 262 0 461 276 52 8 chr17 31046619 31046753 -54391727 - MIR SINE MIR -13 249 110 407 274 0 19 chr17 31047420 31047526 -54390954 - MIR SINE MIR -127 135 32 202 287 135 54 chr17 31048159 31048493 -54389987 + L2 LINE L2 1556 1916 -1398 685 278 128 62 chr17 31049001 31049375 -54389105 + MLT1K LTR MaLR 190 588 0 275 297 118 17 chr17 31049555 31049689 -54388791 + MIR SINE MIR 1 146 -62 319 191 0 59 chr17 31050509 31050577 -54387903 - L2 LINE L2 -8 3264 3201 384 119 0 0 chr17 31050650 31050709 -54387771 + (CA)n Simple_repeat Simple_repeat 2 60 0 231 167 0 0 chr17 31050740 31050782 -54387698 + (CA)n Simple_repeat Simple_repeat 1 42 0 208 360 22 7 chr17 31050892 31051028 -54387452 + L2 LINE L2 2918 3055 -217 180 300 0 0 chr17 31051161 31051201 -54387279 + L2 LINE L2 3186 3225 -47 5982 94 16 51 chr17 31052129 31053515 -54384965 + L1PA16 LINE L1 4809 6157 -9 328 320 0 0 chr17 31053753 31053856 -54384624 + MIR SINE MIR 155 257 -5 626 284 92 5 chr17 31053942 31054160 -54384320 + MIR SINE MIR 8 244 -18 222 284 40 0 chr17 31054844 31054918 -54383562 - MIR3 SINE MIR -53 155 79 237 344 11 11 chr17 31054978 31055071 -54383409 + MIR SINE MIR 54 146 -116 336 102 0 0 chr17 31055072 31055121 -54383359 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 225 358 11 11 chr17 31055133 31055228 -54383252 - MER81 DNA DNA 0 114 20 344 270 0 0 chr17 31055256 31055330 -54383150 - L2 LINE L2 -50 3263 3190 340 319 96 31 chr17 31055374 31055603 -54382877 - MIR SINE MIR -3 259 16 293 244 232 0 chr17 31056171 31056253 -54382227 - MIR3 SINE MIR -26 182 82 313 241 58 138 chr17 31056714 31056964 -54381516 + MIR SINE MIR 2 250 -12 314 227 100 57 chr17 31057909 31058068 -54380412 + MIR3 SINE MIR 8 183 -55 336 247 37 0 chr17 31059004 31059085 -54379395 - MIR SINE MIR -26 236 153 3342 124 4 17 chr17 31059085 31059602 -54378878 - Tigger4(Zombi) DNA MER2_type 0 2731 2222 937 152 0 33 chr17 31059630 31059726 -54378754 - Tigger4(Zombi) DNA MER2_type -2585 146 55 1974 128 0 7 chr17 31059726 31060022 -54378458 - AluSx SINE Alu -18 294 1 937 152 0 33 chr17 31060022 31060076 -54378404 - Tigger4(Zombi) DNA MER2_type -2676 55 1 1528 247 8 22 chr17 31060088 31060456 -54378024 + MLT1A1 LTR MaLR 3 365 0 461 225 36 9 chr17 31060456 31060567 -54377913 - MIR SINE MIR -107 155 42 926 67 0 0 chr17 31063686 31063851 -54374629 - AluY SINE Alu 0 325 161 1936 171 90 43 chr17 31063880 31064347 -54374133 - LTR2B LTR ERV1 0 490 2 1509 161 41 32 chr17 31065003 31065215 -54373265 + MER33 DNA MER1_type 6 214 -2371 2129 109 3 31 chr17 31065215 31065535 -54372945 + AluSp SINE Alu 1 311 -2 189 0 0 0 chr17 31065535 31065556 -54372924 + (TA)n Simple_repeat Simple_repeat 1 21 0 1509 161 41 32 chr17 31065556 31065658 -54372822 + MER33 DNA MER1_type 213 324 0 673 231 230 48 chr17 31065747 31066228 -54372252 + L2 LINE L2 2714 3308 -5 389 290 24 96 chr17 31066571 31066905 -54371575 - L3 LINE CR1 -6 1571 1262 414 269 39 113 chr17 31067149 31067405 -54371075 - L2 LINE L2 -9 3263 3027 621 290 92 66 chr17 31067877 31068270 -54370210 + L2 LINE L2 2870 3272 0 465 313 60 37 chr17 31068364 31068581 -54369899 - MIR SINE MIR -33 229 8 587 247 13 13 chr17 31068750 31068900 -54369580 + MIR SINE MIR 61 210 -52 286 263 123 9 chr17 31069498 31069612 -54368868 + MIR3 SINE MIR 78 204 -4 236 285 133 35 chr17 31069607 31069752 -54368728 + MIR SINE MIR 82 249 -13 * 1954 123 11 0 chr17 31069907 31070192 -54368288 - AluSx SINE Alu -24 288 1 353 280 280 12 chr17 31070224 31070481 -54367999 - L1ME4a LINE L1 0 6121 5796 308 352 119 0 chr17 31071277 31071470 -54367010 - MIR SINE MIR 0 262 47 293 335 37 50 chr17 31072042 31072203 -54366277 - MIR3 SINE MIR -44 164 6 * 324 286 92 17 chr17 31072188 31072307 -54366173 - MIR3 SINE MIR -46 162 35 339 25 0 0 chr17 31073324 31073364 -54365116 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 338 282 129 52 chr17 31073388 31073636 -54364844 - L2 LINE L2 -46 3267 3001 260 378 22 18 chr17 31073731 31073956 -54364524 - L2 LINE L2 -499 2815 2590 554 272 69 29 chr17 31075135 31075308 -54363172 - MIR3 SINE MIR -10 198 19 415 274 89 7 chr17 31075814 31075949 -54362531 - MIR SINE MIR -70 192 47 225 228 30 89 chr17 31076262 31076363 -54362117 - MIR SINE MIR -72 190 96 180 0 0 0 chr17 31076486 31076506 -54361974 + (A)n Simple_repeat Simple_repeat 1 20 0 398 312 36 29 chr17 31076534 31076672 -54361808 - MIR SINE MIR -15 247 109 338 357 103 23 chr17 31076691 31077089 -54361391 - L1MEd LINE L1 -5368 751 322 240 303 78 64 chr17 31077881 31078099 -54360381 + MIR SINE MIR 21 241 -21 351 294 48 32 chr17 31079295 31079421 -54359059 - L2 LINE L2 0 3272 3145 342 298 30 30 chr17 31080275 31080406 -54358074 - L2 LINE L2 -220 3052 2922 286 347 58 28 chr17 31080714 31080906 -54357574 - MIR SINE MIR -44 218 25 255 170 21 0 chr17 31081220 31081267 -54357213 - L3 LINE CR1 -5 1572 1525 409 291 27 67 chr17 31081385 31081626 -54356854 + MIR SINE MIR 13 248 -14 1335 231 47 3 chr17 31081657 31081955 -54356525 - MER58B DNA MER1_type 0 341 31 514 297 18 12 chr17 31082479 31082644 -54355836 + MIR SINE MIR 97 262 0 199 348 36 27 chr17 31083439 31083551 -54354929 - MIR SINE MIR -75 133 21 276 320 118 26 chr17 31083800 31083953 -54354527 + MIR SINE MIR 32 198 -64 * 853 306 0 16 chr17 31083949 31084191 -54354289 - MIR SINE MIR 0 262 25 2087 112 0 34 chr17 31084366 31084687 -54353793 - AluSx SINE Alu -2 310 1 319 266 9 44 chr17 31084756 31084869 -54353611 + L1ME3A LINE L1 6062 6170 0 396 270 51 22 chr17 31084882 31085060 -54353420 + L1MC4 LINE L1 7860 8042 0 240 255 0 0 chr17 31085519 31085570 -54352910 + L2 LINE L2 3016 3066 -247 182 286 60 12 chr17 31085617 31085701 -54352779 + MIR SINE MIR 129 216 -46 350 296 43 0 chr17 31086025 31086140 -54352340 - MIR SINE MIR -58 204 85 344 188 43 29 chr17 31086963 31087032 -54351448 - L2 LINE L2 -3 3310 3241 316 294 169 22 chr17 31087821 31088005 -54350475 + MIR SINE MIR 33 243 -19 1527 284 9 39 chr17 31090019 31090391 -54348089 + LTR16A LTR ERVL 1 358 -92 1917 104 7 55 chr17 31090391 31090699 -54347781 - AluSc SINE Alu -16 293 1 1527 284 9 39 chr17 31090699 31090790 -54347690 + LTR16A LTR ERVL 358 450 0 461 349 35 12 chr17 31090863 31091032 -54347448 - MIR SINE MIR -70 192 20 390 229 0 0 chr17 31091053 31091149 -54347331 + GA-rich Low_complexity Low_complexity 3 98 0 821 248 58 16 chr17 31091159 31091401 -54347079 - MIR SINE MIR -5 257 6 287 380 30 0 chr17 31092077 31092177 -54346303 + L2 LINE L2 2951 3053 -219 339 265 0 0 chr17 31092222 31092290 -54346190 + MIR SINE MIR 57 124 -138 283 250 0 0 chr17 31092416 31092472 -54346008 + L2 LINE L2 3258 3313 0 21 0 0 0 chr17 31092803 31092824 -54345656 + AT_rich Low_complexity Low_complexity 1 21 0 1079 179 32 32 chr17 31093175 31093393 -54345087 + MER20 DNA MER1_type 1 218 -1 209 242 61 15 chr17 31094009 31094075 -54344405 - MIR SINE MIR -70 192 124 377 253 13 0 chr17 31094851 31094930 -54343550 - MER5A DNA MER1_type -97 92 13 311 176 162 0 chr17 31095117 31095191 -54343289 + MER103 DNA DNA 1 86 -80 943 261 65 70 chr17 31095274 31095733 -54342747 + L2 LINE L2 2849 3305 -8 371 230 50 20 chr17 31096160 31096260 -54342220 - MIR SINE MIR -65 197 95 557 240 112 66 chr17 31096437 31096633 -54341847 - MIR SINE MIR 0 262 58 342 286 71 7 chr17 31096930 31097070 -54341410 - MIR3 SINE MIR -30 178 30 333 47 0 0 chr17 31097090 31097133 -54341347 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 367 289 16 33 chr17 31097432 31097553 -54340927 - L2 LINE L2 -191 3081 2963 204 261 0 0 chr17 31097685 31097731 -54340749 - L2 LINE L2 -11 3261 3216 1808 107 50 36 chr17 31097739 31098020 -54340460 + THE1B LTR MaLR 80 364 0 652 268 54 60 chr17 31098233 31098547 -54339933 + LTR16A1 LTR ERVL 146 457 0 246 348 118 14 chr17 31099294 31099581 -54338899 - L2 LINE L2 -666 2648 2332 560 191 213 20 chr17 31099598 31099803 -54338677 + MIR SINE MIR 18 252 -10 22 0 0 0 chr17 31099806 31099828 -54338652 + AT_rich Low_complexity Low_complexity 1 22 0 185 270 240 0 chr17 31100049 31100149 -54338331 - L2 LINE L2 -13 3259 3136 471 295 47 42 chr17 31100664 31100854 -54337626 - MIR3 SINE MIR -15 193 3 217 281 167 9 chr17 31101432 31101546 -54336934 + MIR3 SINE MIR 2 133 -75 359 271 65 9 chr17 31102181 31102288 -54336192 + MLT1L LTR MaLR 433 545 -70 276 279 79 14 chr17 31102381 31102521 -54335959 + L1ME4a LINE L1 5711 5859 -262 432 305 44 55 chr17 31102651 31102923 -54335557 + L1ME4a LINE L1 5852 6120 -1 316 248 26 68 chr17 31104715 31104832 -54333648 - MIR SINE MIR -110 152 41 2197 254 111 8 chr17 31104908 31105627 -54332853 + LTR50 LTR ERVL 1 793 -2 23 0 0 0 chr17 31105653 31105676 -54332804 + AT_rich Low_complexity Low_complexity 1 23 0 228 125 18 107 chr17 31105720 31105776 -54332704 + L2 LINE L2 3263 3313 0 2596 111 8 0 chr17 31107010 31107371 -54331109 - THE1B LTR MaLR 0 364 1 10390 99 36 48 chr17 31107371 31108970 -54329510 - THE1B-int LTR MaLR 0 1580 1 2095 164 45 33 chr17 31108971 31109514 -54328966 - MLT2A2 LTR ERVL -1 553 3 1196 300 96 30 chr17 31109517 31110057 -54328423 + MLT1K LTR MaLR 10 585 -3 331 328 167 20 chr17 31110142 31110418 -54328062 + L2 LINE L2 2728 3036 -236 189 217 171 85 chr17 31110476 31110605 -54327875 + L2 LINE L2 3174 3313 0 226 260 0 0 chr17 31111943 31111993 -54326487 - L2 LINE L2 -219 3053 3004 213 143 0 29 chr17 31111992 31112027 -54326453 + L2 LINE L2 3258 3291 -22 * 180 229 62 0 chr17 31112497 31112545 -54325935 + L2 LINE L2 3004 3054 -218 358 258 47 55 chr17 31112709 31112837 -54325643 - MIR SINE MIR -122 140 14 279 235 175 0 chr17 31113057 31113201 -54325279 - MIR3 SINE MIR 0 208 35 201 183 28 28 chr17 31113230 31113301 -54325179 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 298 319 106 9 chr17 31113524 31113637 -54324843 + MIR SINE MIR 19 142 -66 446 292 97 0 chr17 31113688 31113832 -54324648 - MER117 DNA MER1_type -33 164 7 196 231 209 22 chr17 31114445 31114536 -54323944 + MIR SINE MIR 21 128 -80 557 299 70 6 chr17 31114807 31114964 -54323516 - MIR SINE MIR -95 167 1 629 254 0 36 chr17 31115249 31115414 -54323066 - MIR SINE MIR -96 166 8 539 261 83 24 chr17 31115891 31116086 -54322394 + MIR SINE MIR 12 213 -49 289 239 45 23 chr17 31116254 31116342 -54322138 - MIR SINE MIR -70 192 103 1456 211 3 20 chr17 31116871 31117170 -54321310 - AluJb SINE Alu -18 294 1 240 235 73 0 chr17 31117384 31117452 -54321028 - MIR SINE MIR -34 228 156 791 186 0 32 chr17 31117465 31117621 -54320859 + MER45A DNA AcHobo 28 178 0 287 200 100 14 chr17 31117621 31117691 -54320789 - MIR SINE MIR -97 165 90 328 273 70 23 chr17 31118653 31118781 -54319699 - MER5B DNA MER1_type -41 137 4 229 153 0 119 chr17 31118919 31118978 -54319502 + L2 LINE L2 3221 3272 0 1247 256 92 24 chr17 31119063 31119517 -54318963 - LTR16C LTR ERVL -2 489 5 1279 156 33 0 chr17 31119701 31119913 -54318567 - MER20 DNA MER1_type 0 219 1 248 224 0 0 chr17 31121053 31121102 -54317378 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 348 174 0 chr17 31121337 31121429 -54317051 - MIR SINE MIR -74 134 27 228 341 8 48 chr17 31121609 31121735 -54316745 - MIR SINE MIR -42 220 100 188 320 50 50 chr17 31121838 31121938 -54316542 + L2 LINE L2 3208 3307 -6 226 239 56 14 chr17 31122524 31122595 -54315885 + MIR3 SINE MIR 89 162 -46 193 328 0 0 chr17 31123701 31123762 -54314718 + MIR3 SINE MIR 117 177 -31 343 410 11 6 chr17 31123803 31123981 -54314499 + MIR3 SINE MIR 16 194 -14 393 22 0 0 chr17 31124237 31124283 -54314197 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 1092 252 6 55 chr17 31124436 31124761 -54313719 + L2 LINE L2 3005 3313 0 263 361 49 8 chr17 31124974 31125096 -54313384 + L2 LINE L2 3145 3271 -1 255 246 27 82 chr17 31125239 31125349 -54313131 - MARNA DNA Mariner -92 494 391 851 270 58 14 chr17 31125749 31125821 -54312659 - L1MD3 LINE L1 -11 7984 7917 1821 159 0 10 chr17 31125821 31126135 -54312345 - AluY SINE Alu 0 311 1 851 270 58 14 chr17 31126135 31126340 -54312140 - L1MD3 LINE L1 -78 7917 7695 28961 38 4 5 chr17 31326350 31330624 -54107856 + L1PA4 LINE L1 1887 6155 0 30 0 0 0 chr17 31330624 31330654 -54107826 + AT_rich Low_complexity Low_complexity 1 30 0 39 22 0 0 chr17 31334194 31334240 -54104240 + GC_rich Low_complexity Low_complexity 1 46 0 240 313 0 0 chr17 31334484 31334567 -54103913 + G-rich Low_complexity Low_complexity 1 83 0 208 336 69 8 chr17 31334584 31334715 -54103765 - MIR SINE MIR -61 201 63 380 289 0 0 chr17 31334964 31335078 -54103402 - MIR SINE MIR -71 191 78 181 259 0 69 chr17 31335183 31335241 -54103239 - L2 LINE L2 -30 3283 3230 220 276 90 8 chr17 31335606 31335740 -54102740 + MIR SINE MIR 74 218 -44 2255 249 57 27 chr17 31335983 31336785 -54101695 + L1ME1 LINE L1 5338 6119 -47 1371 305 21 14 chr17 31336918 31337400 -54101080 + L1ME3A LINE L1 5679 6163 -7 348 24 0 0 chr17 31338195 31338236 -54100244 + (CA)n Simple_repeat Simple_repeat 1 41 0 190 289 133 11 chr17 31338987 31339077 -54099403 - L2 LINE L2 -19 3253 3153 336 331 23 8 chr17 31339603 31339733 -54098747 + MIR3 SINE MIR 23 154 -54 896 302 122 21 chr17 31339920 31340394 -54098086 + MLT1H1 LTR MaLR 34 555 0 448 283 94 26 chr17 31341012 31341245 -54097235 - MIR SINE MIR -1 261 13 282 286 124 0 chr17 31341317 31341422 -54097058 - L2 LINE L2 0 3272 3155 216 0 0 0 chr17 31341593 31341617 -54096863 + (A)n Simple_repeat Simple_repeat 1 24 0 1051 220 33 4 chr17 31341624 31341869 -54096611 + MLT1H LTR MaLR 5 256 -293 212 362 43 0 chr17 31341886 31341980 -54096500 - L2 LINE L2 -41 3272 3175 267 366 42 10 chr17 31342074 31342412 -54096068 - L3 LINE CR1 -118 1459 1069 347 276 57 0 chr17 31342646 31342751 -54095729 + MIR SINE MIR 29 139 -123 1570 188 22 7 chr17 31343098 31343397 -54095083 + AluJb SINE Alu 3 305 0 295 263 38 53 chr17 31345393 31345526 -54092954 + MIR SINE MIR 14 144 -118 312 27 0 0 chr17 31345899 31345936 -54092544 + (CA)n Simple_repeat Simple_repeat 2 38 0 234 81 0 0 chr17 31345936 31345973 -54092507 + (GA)n Simple_repeat Simple_repeat 1 37 0 299 192 13 0 chr17 31346114 31346192 -54092288 + (TTCA)n Simple_repeat Simple_repeat 1 79 0 2299 103 0 7 chr17 31346689 31346989 -54091491 - AluSq SINE Alu -15 298 1 211 322 0 0 chr17 31346993 31347052 -54091428 + CT-rich Low_complexity Low_complexity 3 61 0 650 273 19 57 chr17 31347590 31347854 -54090626 - MIR SINE MIR 0 262 9 199 362 29 9 chr17 31348868 31348973 -54089507 - L2 LINE L2 -44 3269 3163 294 378 29 18 chr17 31348999 31349311 -54089169 - L2 LINE L2 -257 3015 2698 330 217 36 58 chr17 31349320 31349458 -54089022 - L1MC5 LINE L1 -44 7917 7783 1604 198 149 30 chr17 31349499 31349970 -54088510 - L1ME2 LINE L1 -10 6154 5628 497 295 98 26 chr17 31349987 31350221 -54088259 - L2 LINE L2 -634 2680 2430 512 274 61 12 chr17 31350448 31350612 -54087868 + MER117 DNA MER1_type 2 173 -24 210 118 0 0 chr17 31351136 31351170 -54087310 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 228 363 52 36 chr17 31351316 31351509 -54086971 - L2 LINE L2 -216 3056 2861 436 324 84 0 chr17 31352875 31353054 -54085426 - MIR SINE MIR -15 247 54 15562 197 14 7 chr17 31353070 31359597 -54078883 + L1PB1 LINE L1 6 6867 0 453 296 33 21 chr17 31359943 31360183 -54078297 - MIR SINE MIR -6 256 14 767 238 0 17 chr17 31360386 31360567 -54077913 + MER5B DNA MER1_type 1 178 0 351 311 106 61 chr17 31361380 31361692 -54076788 + L1ME4a LINE L1 5354 5679 -442 375 268 45 36 chr17 31361695 31361877 -54076603 + L1ME4a LINE L1 5710 5896 -225 280 240 42 52 chr17 31362369 31362465 -54076015 + MER81 DNA DNA 20 114 0 560 287 19 0 chr17 31362553 31362710 -54075770 + MIR3 SINE MIR 33 192 -16 648 279 18 0 chr17 31363093 31363258 -54075222 - MER63A DNA MER1_type -4 206 39 824 176 25 18 chr17 31363259 31363517 -54074963 + CT-rich Low_complexity Low_complexity 1 259 0 274 362 26 13 chr17 31363913 31364065 -54074415 + MIR SINE MIR 20 173 -89 2252 106 7 0 chr17 31365623 31365916 -54072564 + AluSx SINE Alu 1 295 -17 302 217 142 19 chr17 31366445 31366551 -54071929 - MIR SINE MIR -86 176 58 435 299 111 11 chr17 31366594 31366945 -54071535 - L1ME4a LINE L1 -10 6111 5726 481 253 0 0 chr17 31367194 31367293 -54071187 - MER58A DNA MER1_type -1 223 125 664 197 0 33 chr17 31367335 31367457 -54071023 - MER58A DNA MER1_type 0 118 1 846 197 6 11 chr17 31368134 31368312 -54070168 + MER5A DNA MER1_type 13 189 0 182 291 137 8 chr17 31368353 31368470 -54070010 - MIR SINE MIR -35 227 96 2348 107 3 0 chr17 31368850 31369160 -54069320 - AluSx SINE Alu -1 311 1 265 315 0 11 chr17 31369396 31369488 -54068992 + MIR SINE MIR 48 138 -70 344 263 183 0 chr17 31369697 31369887 -54068593 + L2 LINE L2 2795 3016 -297 1208 131 11 0 chr17 31369894 31370070 -54068410 - AluSg/x SINE Alu 0 312 135 2317 91 3 7 chr17 31370073 31370380 -54068100 - AluSq SINE Alu -7 306 1 340 276 29 22 chr17 31371067 31371228 -54067252 - MIR SINE MIR -46 162 11 282 353 81 41 chr17 31372077 31372397 -54066083 + L2 LINE L2 2919 3251 -21 517 342 82 46 chr17 31373111 31373749 -54064731 + L2 LINE L2 2600 3255 -17 352 250 68 0 chr17 31373752 31373840 -54064640 + MER96 DNA MER1_type? 2 95 -80 238 333 59 0 chr17 31374285 31374387 -54064093 + MER91C DNA MER1_type 1 108 -32 223 320 57 41 chr17 31374760 31374882 -54063598 - MIR3 SINE MIR -19 189 66 375 309 77 6 chr17 31375179 31375347 -54063133 + MER5A DNA MER1_type 7 186 -3 334 295 0 0 chr17 31375830 31375925 -54062555 + MIR SINE MIR 59 153 -109 218 315 81 30 chr17 31376092 31376289 -54062191 + L2 LINE L2 2906 3112 -160 490 290 86 41 chr17 31376733 31376954 -54061526 - MIR SINE MIR -12 250 20 45135 36 2 4 chr17 31377097 31383261 -54055219 - L1PA3 LINE L1 0 6155 1 303 254 59 51 chr17 31383265 31383383 -54055097 - L2 LINE L2 0 3313 3195 448 274 71 42 chr17 31385860 31386028 -54052452 + MIR SINE MIR 2 174 -88 679 229 51 62 chr17 31386972 31387247 -54051233 - L1ME3A LINE L1 -209 5961 5690 264 309 106 24 chr17 31387565 31387688 -54050792 + L2 LINE L2 3138 3270 -2 196 227 155 62 chr17 31388579 31388676 -54049804 - MIR SINE MIR -126 136 31 241 306 81 9 chr17 31388858 31388969 -54049511 - L2 LINE L2 -4 3309 3191 280 301 8 65 chr17 31389098 31389221 -54049259 + MIR3 SINE MIR 85 200 -8 525 167 0 0 chr17 31389683 31389833 -54048647 + (TA)n Simple_repeat Simple_repeat 1 150 0 471 302 88 0 chr17 31389925 31390130 -54048350 - MIR SINE MIR -6 256 34 186 313 0 45 chr17 31390152 31390219 -54048261 - L2 LINE L2 0 3313 3250 301 334 122 30 chr17 31390243 31390655 -54047825 - L2 LINE L2 -188 3084 2625 2400 65 23 10 chr17 31390655 31390961 -54047519 + AluY SINE Alu 1 310 -1 301 334 122 30 chr17 31390961 31391044 -54047436 - L2 LINE L2 -647 2625 2551 712 186 186 42 chr17 31391482 31391697 -54046783 + MLT1C LTR MaLR 1 246 -221 271 156 13 182 chr17 31391753 31391830 -54046650 + MER2 DNA MER2_type 281 344 -1 221 256 77 0 chr17 31391866 31391944 -54046536 - MIR SINE MIR -62 200 117 275 356 42 0 chr17 31392136 31392254 -54046226 - L2 LINE L2 -27 3245 3123 282 325 57 0 chr17 31392654 31392777 -54045703 + L2 LINE L2 3184 3313 0 916 117 11 22 chr17 31393176 31393356 -54045124 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 635 154 18 30 chr17 31393500 31393669 -54044811 + GA-rich Low_complexity Low_complexity 4 170 0 1229 60 0 22 chr17 31393670 31393854 -54044626 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 612 202 43 53 chr17 31394944 31395132 -54043348 + MIR SINE MIR 49 234 -28 31 44 0 0 chr17 31395591 31395636 -54042844 + AT_rich Low_complexity Low_complexity 1 45 0 342 237 61 30 chr17 31395848 31395979 -54042501 - L1MC5 LINE L1 -44 7917 7783 2032 115 3 64 chr17 31396076 31396406 -54042074 + AluSx SINE Alu 1 310 -2 1345 230 57 54 chr17 31396458 31397214 -54041266 - L1ME2 LINE L1 -106 6148 5396 1520 191 10 31 chr17 31397214 31397502 -54040978 - AluJo SINE Alu -30 282 1 1345 230 57 54 chr17 31397502 31399666 -54038814 - L1ME2 LINE L1 -858 5396 3041 2853 248 93 93 chr17 31399709 31400548 -54037932 - L1MC4 LINE L1 -34 8008 7170 180 77 0 0 chr17 31400548 31400574 -54037906 + (TATG)n Simple_repeat Simple_repeat 1 26 0 205 71 0 48 chr17 31400577 31400619 -54037861 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 2853 248 93 93 chr17 31400619 31401268 -54037212 - L1MC4 LINE L1 -874 7168 6520 1701 179 3 26 chr17 31401268 31401580 -54036900 + AluJb SINE Alu 1 305 -7 2853 248 93 93 chr17 31401580 31402354 -54036126 - L1MC4 LINE L1 -1522 6520 5658 1655 240 76 29 chr17 31402369 31403057 -54035423 - L1ME2 LINE L1 -3171 3044 2325 307 39 0 39 chr17 31403079 31403130 -54035350 + (TTTTA)n Simple_repeat Simple_repeat 1 49 0 289 234 43 21 chr17 31403150 31403244 -54035236 - L1ME2 LINE L1 -4011 2385 2290 517 294 50 68 chr17 31403258 31403656 -54034824 - L1ME3A LINE L1 -287 5883 5493 219 114 0 0 chr17 31403970 31404005 -54034475 + (TG)n Simple_repeat Simple_repeat 1 35 0 225 0 0 0 chr17 31404024 31404049 -54034431 + (AGATG)n Simple_repeat Simple_repeat 2 26 0 2194 110 0 7 chr17 31404990 31405281 -54033199 + AluSx SINE Alu 1 289 -23 304 133 13 13 chr17 31405311 31405386 -54033094 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 287 348 93 0 chr17 31405396 31405557 -54032923 + L1ME4a LINE L1 5473 5648 -2160 220 336 96 0 chr17 31405659 31405763 -54032717 - MIR SINE MIR -129 133 20 427 308 44 8 chr17 31405784 31406034 -54032446 + L1ME4a LINE L1 5673 5931 -190 311 311 41 36 chr17 31406197 31406347 -54032133 + MIR SINE MIR 42 195 -67 1646 203 0 3 chr17 31407343 31407633 -54030847 + AluJo SINE Alu 17 305 -7 1763 177 23 0 chr17 31407644 31407949 -54030531 + AluJo SINE Alu 1 312 0 196 297 54 0 chr17 31407957 31408031 -54030449 - MIR SINE MIR -70 192 115 200 228 35 0 chr17 31408545 31408602 -54029878 + MIR SINE MIR 54 112 -150 410 299 133 90 chr17 31409360 31409858 -54028622 - L3 LINE CR1 -12 1565 1047 304 313 125 0 chr17 31410259 31410419 -54028061 + MIR SINE MIR 47 226 -36 223 329 59 26 chr17 31411395 31411547 -54026933 - L2 LINE L2 -219 3053 2897 513 321 26 42 chr17 31411651 31411916 -54026564 - L2 LINE L2 -693 2621 2361 769 308 13 4 chr17 31412133 31412360 -54026120 + MIR SINE MIR 8 236 -26 430 310 70 5 chr17 31413235 31413422 -54025058 + MIR SINE MIR 8 206 -56 357 43 0 0 chr17 31413655 31413702 -54024778 + (CA)n Simple_repeat Simple_repeat 2 48 0 511 216 0 0 chr17 31414129 31414217 -54024263 - 5S rRNA rRNA -32 89 2 621 135 36 0 chr17 31414469 31414580 -54023900 + MLT1C-int LTR MaLR 1243 1357 -14 1896 148 79 77 chr17 31414601 31414775 -54023705 + MLT1C LTR MaLR 1 173 -294 2402 102 0 3 chr17 31414775 31415088 -54023392 - AluSx SINE Alu 0 312 1 1896 148 79 77 chr17 31415088 31415379 -54023101 + MLT1C LTR MaLR 173 467 0 353 348 11 11 chr17 31415495 31415679 -54022801 + L2 LINE L2 2560 2743 -571 184 220 119 0 chr17 31416068 31416127 -54022353 + L2 LINE L2 3195 3260 -12 312 285 35 65 chr17 31416198 31416398 -54022082 - MIR SINE MIR -35 227 34 388 285 159 7 chr17 31417623 31417774 -54020706 + MIR SINE MIR 7 180 -82 384 266 12 77 chr17 31417778 31417848 -54020632 - MIR SINE MIR -6 256 183 1805 173 7 7 chr17 31417848 31418149 -54020331 + AluSx SINE Alu 1 301 -11 384 266 12 77 chr17 31418149 31418247 -54020233 - MIR SINE MIR -79 183 99 214 122 24 0 chr17 31418253 31418294 -54020186 + MIR SINE MIR 195 236 -26 1194 222 47 47 chr17 31418606 31418984 -54019496 - MLT1A2 LTR MaLR -16 374 3 637 274 23 0 chr17 31419486 31419661 -54018819 - LTR67 LTR ERVL -30 527 349 238 354 0 0 chr17 31419719 31419798 -54018682 - MIR SINE MIR -112 150 72 547 315 96 42 chr17 31419994 31420378 -54018102 + MLT1J2 LTR MaLR 45 449 -1 432 232 159 0 chr17 31420796 31420947 -54017533 - MER5A DNA MER1_type -6 183 9 307 176 33 121 chr17 31421955 31422046 -54016434 + MIR SINE MIR 42 124 -84 266 273 0 0 chr17 31422560 31422626 -54015854 + MIR SINE MIR 81 146 -116 448 286 20 20 chr17 31422871 31423018 -54015462 - MER5B DNA MER1_type -8 170 24 515 297 28 0 chr17 31423175 31423320 -54015160 - MIR SINE MIR -2 260 112 304 286 21 50 chr17 31423640 31423780 -54014700 - MER103 DNA DNA -28 138 3 298 253 84 12 chr17 31424516 31424599 -54013881 - L2 LINE L2 -11 3261 3173 333 284 64 50 chr17 31424725 31424866 -54013614 + L2 LINE L2 3125 3267 -5 284 370 9 9 chr17 31426138 31426246 -54012234 + MIR SINE MIR 29 136 -126 631 140 0 0 chr17 31426246 31426339 -54012141 - LTR12 LTR ERV1 -5 709 617 231 260 14 0 chr17 31426343 31426416 -54012064 - LTR30 LTR ERV1 -79 643 570 763 84 64 249 chr17 31426425 31426722 -54011758 - LTR12 LTR ERV1 -420 294 53 273 211 0 0 chr17 31426722 31426774 -54011706 - LTR30 LTR ERV1 -670 52 1 213 278 106 60 chr17 31427782 31427846 -54010634 - MIR SINE MIR -69 193 133 646 205 114 71 chr17 31427846 31428056 -54010424 + MER20 DNA MER1_type 1 219 0 213 278 106 60 chr17 31428056 31428140 -54010340 - MIR SINE MIR -129 133 35 848 155 93 12 chr17 31429490 31429651 -54008829 + MER5B DNA MER1_type 2 175 -3 26 0 0 0 chr17 31429821 31429847 -54008633 + AT_rich Low_complexity Low_complexity 1 26 0 5640 123 34 8 chr17 31429992 31430871 -54007609 + MER4D LTR ERV1 2 903 0 258 347 72 30 chr17 31430988 31431155 -54007325 + L2 LINE L2 2935 3108 -164 2259 159 8 6 chr17 31431666 31432024 -54006456 - MLT1A1 LTR MaLR 0 365 7 591 278 30 0 chr17 31432202 31432371 -54006109 + MIR SINE MIR 79 252 -10 508 231 82 36 chr17 31432926 31433121 -54005359 + L1MC5 LINE L1 7002 7205 -756 248 274 0 16 chr17 31433209 31433271 -54005209 + L1MD3 LINE L1 7426 7486 -509 394 306 6 6 chr17 31433310 31433467 -54005013 + L1MC5 LINE L1 7312 7468 -493 * 3045 257 132 60 chr17 31433457 31435374 -54003106 + L1MC4a LINE L1 5678 7639 -169 327 233 39 0 chr17 31435363 31435448 -54003032 + L1MC4 LINE L1 7904 7995 0 * 456 356 85 13 chr17 31435456 31435692 -54002788 + L2 LINE L2 3017 3269 -3 219 367 18 9 chr17 31435686 31435795 -54002685 - L3 LINE CR1 -127 1450 1341 * 359 315 0 16 chr17 31437217 31437344 -54001136 + MIR SINE MIR 18 142 -66 1045 218 166 3 chr17 31437359 31437648 -54000832 + MSTB2 LTR MaLR 1 336 -121 685 104 16 80 chr17 31437864 31438015 -54000465 + MSTB2 LTR MaLR 291 456 -1 701 313 23 19 chr17 31438059 31438315 -54000165 + MIR SINE MIR 6 262 0 510 275 132 21 chr17 31438615 31438804 -53999676 - MIR SINE MIR -46 216 7 774 301 103 58 chr17 31439449 31439894 -53998586 - L3 LINE CR1 -4 1573 1109 1174 219 52 60 chr17 31440423 31440792 -53997688 - LTR16A1 LTR ERVL -6 451 86 189 147 0 0 chr17 31441083 31441117 -53997363 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 408 270 14 0 chr17 31441250 31441370 -53997110 - MIR3 SINE MIR -37 171 45 23 0 0 0 chr17 31443075 31443098 -53995382 + AT_rich Low_complexity Low_complexity 1 23 0 1396 150 0 0 chr17 31443143 31443369 -53995111 - AluJb SINE Alu 0 312 87 349 178 0 14 chr17 31443369 31443442 -53995038 + L1ME4a LINE L1 6045 6116 -5 202 269 39 19 chr17 31443622 31443674 -53994806 - L2 LINE L2 -34 3238 3186 5305 129 6 20 chr17 31443728 31444597 -53993883 + L1MA8 LINE L1 5435 6291 0 212 297 78 0 chr17 31444607 31444671 -53993809 + MIR3 SINE MIR 134 202 -6 2053 106 34 0 chr17 31444886 31445178 -53993302 + AluSg SINE Alu 6 307 -3 511 311 80 28 chr17 31445834 31446046 -53992434 - MIR SINE MIR -24 238 16 27 0 0 0 chr17 31446059 31446086 -53992394 + AT_rich Low_complexity Low_complexity 1 27 0 222 273 53 53 chr17 31446692 31446824 -53991656 - MIR SINE MIR -80 182 51 234 91 0 0 chr17 31449619 31449652 -53988828 + (CA)n Simple_repeat Simple_repeat 2 34 0 432 0 0 0 chr17 31451919 31451967 -53986513 + (TG)n Simple_repeat Simple_repeat 2 49 0 324 0 0 0 chr17 31452008 31452044 -53986436 + (TG)n Simple_repeat Simple_repeat 2 37 0 660 297 43 17 chr17 31452675 31452907 -53985573 - MIR SINE MIR -7 255 18 297 0 0 0 chr17 31452975 31453008 -53985472 + (CA)n Simple_repeat Simple_repeat 2 34 0 263 362 60 47 chr17 31453147 31453296 -53985184 - L2 LINE L2 0 3272 3122 482 306 13 13 chr17 31453656 31453813 -53984667 + MIR SINE MIR 80 236 -26 507 258 81 40 chr17 31454130 31454328 -53984152 - MIR SINE MIR -35 227 22 254 267 89 11 chr17 31455771 31455861 -53982619 - MER5A DNA MER1_type -21 168 72 484 296 193 44 chr17 31455930 31456292 -53982188 + L2 LINE L2 2897 3312 -1 1593 164 20 16 chr17 31456677 31456981 -53981499 - AluJo SINE Alu -7 305 1 206 211 18 18 chr17 31458257 31458314 -53980166 + A-rich Low_complexity Low_complexity 5 61 0 349 265 138 25 chr17 31458581 31458762 -53979718 - MIR3 SINE MIR -50 212 8 316 263 26 4 chr17 31459411 31459504 -53978976 - MIR SINE MIR -52 156 64 542 325 78 5 chr17 31459591 31459797 -53978683 + MIR SINE MIR 42 262 0 186 379 0 0 chr17 31460033 31460099 -53978381 - L2 LINE L2 -21 3251 3186 466 266 98 81 chr17 31460773 31460857 -53977623 - MIR SINE MIR -4 258 177 1418 155 5 14 chr17 31460857 31461076 -53977404 - MER20 DNA MER1_type -1 218 2 466 266 98 81 chr17 31461076 31461256 -53977224 - MIR SINE MIR -85 177 4 299 297 55 26 chr17 31461344 31461510 -53976970 - MIR SINE MIR -56 206 37 227 304 122 9 chr17 31462032 31462147 -53976333 - MIR SINE MIR -59 203 76 651 301 24 10 chr17 31462220 31462426 -53976054 + MIR SINE MIR 8 216 -46 189 94 0 0 chr17 31464022 31464054 -53974426 + (T)n Simple_repeat Simple_repeat 1 32 0 1784 160 3 3 chr17 31464660 31464948 -53973532 + AluJo SINE Alu 1 288 -24 27 29 0 0 chr17 31464950 31464984 -53973496 + AT_rich Low_complexity Low_complexity 1 34 0 1150 129 110 10 chr17 31465191 31465400 -53973080 + MER30 DNA MER1_type 1 230 0 216 0 0 0 chr17 31466044 31466068 -53972412 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 194 292 79 56 chr17 31466083 31466172 -53972308 - L2 LINE L2 -32 3240 3150 1960 175 92 157 chr17 31466352 31467125 -53971355 - LTR8A LTR ERV1 -4 723 1 405 223 27 115 chr17 31467700 31467848 -53970632 - L2 LINE L2 0 3313 3179 3516 146 25 31 chr17 31467967 31468571 -53969909 - LTR9 LTR ERV1 -12 600 1 414 261 17 34 chr17 31468573 31468692 -53969788 - MIR SINE MIR -133 129 13 754 269 42 14 chr17 31468945 31469161 -53969319 - MIR SINE MIR -2 260 39 1159 12 47 0 chr17 31469206 31469375 -53969105 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 320 271 39 16 chr17 31469951 31470080 -53968400 + MER94 DNA DNA 2 133 -1 313 301 44 35 chr17 31470096 31470209 -53968271 - MIR SINE MIR -29 233 120 203 61 30 0 chr17 31472182 31472215 -53966265 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 332 321 82 30 chr17 31472515 31472649 -53965831 - MIR SINE MIR -114 148 8 189 0 0 0 chr17 31473027 31473048 -53965432 + (A)n Simple_repeat Simple_repeat 1 21 0 6169 164 36 27 chr17 31474100 31475740 -53962740 + L1MC1 LINE L1 4684 6333 0 251 172 0 17 chr17 31475751 31475809 -53962671 + GA-rich Low_complexity Low_complexity 2 58 0 337 301 82 36 chr17 31475835 31476054 -53962426 - MIR SINE MIR -14 248 20 280 328 141 8 chr17 31476186 31476314 -53962166 - MIR SINE MIR -117 145 1 306 260 21 52 chr17 31476360 31476456 -53962024 + MIR3 SINE MIR 97 189 -19 331 297 158 22 chr17 31476797 31477019 -53961461 + L2 LINE L2 2479 2730 -584 1910 45 0 0 chr17 31477019 31477239 -53961241 - AluY SINE Alu -13 298 79 2830 91 58 19 chr17 31477239 31477670 -53960810 + LTR7 LTR ERV1 1 448 -2 20256 101 58 29 chr17 31477672 31480872 -53957608 + HERVH LTR ERV1 1 3290 -4423 3377 118 6 2 chr17 31480862 31481362 -53957118 + HERVH LTR ERV1 3492 3993 -3720 * 4083 147 14 18 chr17 31481364 31482029 -53956451 + HERVH LTR ERV1 4488 5149 -2564 1325 130 33 9 chr17 31482030 31482245 -53956235 + HERVH LTR ERV1 5600 5819 -1894 * 2625 69 48 13 chr17 31482243 31482622 -53955858 + HERVH LTR ERV1 7322 7713 0 2603 91 91 21 chr17 31482622 31483041 -53955439 + LTR7 LTR ERV1 1 448 -2 636 98 0 0 chr17 31483043 31483125 -53955355 - AluY SINE Alu -227 83 2 2337 88 7 0 chr17 31483206 31483501 -53954979 + AluSc SINE Alu 1 297 -12 39 80 0 0 chr17 31484204 31484292 -53954188 + AT_rich Low_complexity Low_complexity 1 88 0 740 271 22 22 chr17 31484372 31484601 -53953879 + L1ME3A LINE L1 4588 4819 -1327 1711 154 0 77 chr17 31484601 31484925 -53953555 + AluJo SINE Alu 1 299 -13 740 271 22 22 chr17 31484925 31484972 -53953508 + L1ME3A LINE L1 4818 4864 -1282 464 229 71 14 chr17 31484956 31485096 -53953384 - L1ME3A LINE L1 -226 5944 5797 * 2834 244 57 44 chr17 31485121 31485229 -53953251 + L1ME3A LINE L1 4882 4987 -1183 1214 29 0 0 chr17 31485229 31485365 -53953115 + L1PA5 LINE L1 6014 6149 -5 2834 244 57 44 chr17 31485365 31486530 -53951950 + L1ME3A LINE L1 4987 6169 -1 315 259 0 0 chr17 31486572 31486657 -53951823 + L1ME4a LINE L1 4744 4828 -1318 2176 96 7 10 chr17 31486817 31487119 -53951361 + AluSx SINE Alu 1 301 -11 2127 119 3 0 chr17 31487229 31487531 -53950949 - AluSq SINE Alu -10 303 1 609 300 101 22 chr17 31487566 31488012 -53950468 + L1ME4a LINE L1 5293 5773 -348 267 170 149 32 chr17 31488378 31488472 -53950008 + L1ME4a LINE L1 5808 5912 -209 207 297 0 0 chr17 31489045 31489146 -53949334 + (TA)n Simple_repeat Simple_repeat 2 102 0 209 95 0 24 chr17 31489227 31489269 -53949211 + (TTTTTA)n Simple_repeat Simple_repeat 6 46 0 196 197 15 15 chr17 31489296 31489362 -53949118 + (TA)n Simple_repeat Simple_repeat 2 67 0 262 231 0 26 chr17 31489606 31489684 -53948796 - L1ME3 LINE L1 -4 6158 6083 422 179 0 0 chr17 31489766 31489844 -53948636 - L1MA10 LINE L1 -7 6327 6250 491 289 128 20 chr17 31489852 31490056 -53948424 + MIR SINE MIR 36 261 -1 230 356 10 29 chr17 31490026 31490130 -53948350 - MIR SINE MIR -84 178 77 * 233 286 40 53 chr17 31490316 31490448 -53948032 + MIR SINE MIR 70 198 -57 293 273 124 25 chr17 31490614 31490775 -53947705 - MIR SINE MIR -12 250 74 3728 250 70 15 chr17 31490813 31492136 -53946344 + L1ME2 LINE L1 3585 4979 -1167 1743 158 63 0 chr17 31492185 31492469 -53946011 + MER7A DNA MER2_type 45 344 -2 246 229 0 0 chr17 31492471 31492519 -53945961 + L1ME2 LINE L1 5028 5075 -1071 204 97 0 0 chr17 31492560 31492591 -53945889 + (GGAGA)n Simple_repeat Simple_repeat 4 34 0 766 130 11 33 chr17 31492605 31492789 -53945691 + GA-rich Low_complexity Low_complexity 1 180 0 263 274 0 16 chr17 31492790 31492852 -53945628 + polypurine Low_complexity Low_complexity 3 63 0 2877 227 67 46 chr17 31492852 31493889 -53944591 + L1ME2 LINE L1 5106 6164 0 472 254 60 90 chr17 31494610 31494706 -53943774 - MIR SINE MIR -13 249 152 284 0 0 27 chr17 31494706 31494743 -53943737 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 894 201 13 0 chr17 31494746 31494895 -53943585 - AluJo SINE Alu -15 287 137 472 254 60 90 chr17 31494895 31495027 -53943453 - MIR SINE MIR -112 150 30 240 312 176 54 chr17 31495277 31495556 -53942924 - L2 LINE L2 -3 3269 2957 586 345 34 8 chr17 31495880 31496115 -53942365 - MIR SINE MIR -20 242 2 564 296 190 0 chr17 31497237 31497521 -53940959 - MLT1I LTR MaLR 0 409 72 319 326 11 0 chr17 31498054 31498143 -53940337 - MIR SINE MIR -112 150 61 308 284 135 7 chr17 31498184 31498325 -53940155 + MIR3 SINE MIR 20 178 -30 2198 118 3 3 chr17 31499908 31500212 -53938268 - AluSq SINE Alu -9 304 1 4200 190 38 16 chr17 31501080 31502502 -53935978 - L1MB7 LINE L1 -19 6663 5199 2284 108 0 10 chr17 31502502 31502816 -53935664 - AluY SINE Alu 0 311 1 4200 190 38 16 chr17 31502816 31502964 -53935516 - L1MB7 LINE L1 -1483 5199 5056 316 215 0 0 chr17 31502965 31503030 -53935450 - Ricksha DNA DNA -2346 900 836 2625 183 48 26 chr17 31503039 31503543 -53934937 - MLT2B3 LTR ERVL -39 515 1 982 192 68 4 chr17 31503544 31503778 -53934702 - L1MB7 LINE L1 -1582 5062 4814 41781 70 7 2 chr17 31503799 31509912 -53928568 - L1PA5 LINE L1 -2 6152 11 1177 174 17 131 chr17 31509924 31510014 -53928466 - L1MB7 LINE L1 -1816 4828 4729 884 140 7 37 chr17 31510014 31510150 -53928330 - AluJo SINE Alu -169 133 2 1177 174 17 131 chr17 31510150 31510409 -53928071 - L1MB7 LINE L1 -1915 4729 4519 957 246 9 23 chr17 31510403 31510745 -53927735 - L1MB7 LINE L1 -2770 3874 3538 * 2198 178 35 113 chr17 31510743 31510880 -53927600 - L1MB7 LINE L1 -5376 1166 1020 7320 66 9 0 chr17 31510880 31511845 -53926635 - L1PA7 LINE L1 -2 6152 5183 2198 178 35 113 chr17 31511845 31512157 -53926323 - L1MB7 LINE L1 -5522 1020 773 2063 118 3 33 chr17 31512157 31512461 -53926019 + AluSx SINE Alu 1 295 -17 2198 178 35 113 chr17 31512461 31512610 -53925870 - L1MB7 LINE L1 -5769 773 614 276 302 198 0 chr17 31513242 31513348 -53925132 - L3 LINE CR1 -72 1505 1379 293 348 81 0 chr17 31513355 31513516 -53924964 + MIR SINE MIR 8 181 -81 315 335 125 27 chr17 31513573 31514102 -53924378 - L3 LINE CR1 -187 1390 738 402 335 132 19 chr17 31514283 31514495 -53923985 - MIR SINE MIR -7 255 20 433 277 113 6 chr17 31514539 31514698 -53923782 - MER5A DNA MER1_type -1 188 13 472 320 34 11 chr17 31515440 31515618 -53922862 + MIR SINE MIR 81 262 0 423 299 162 0 chr17 31515635 31515789 -53922691 + MER5A DNA MER1_type 11 189 0 370 247 82 88 chr17 31516405 31516575 -53921905 + MIR SINE MIR 89 257 -5 456 295 33 0 chr17 31516594 31516716 -53921764 + L2 LINE L2 3188 3313 0 240 261 120 22 chr17 31517472 31517564 -53920916 - MER5A DNA MER1_type -80 109 9 249 184 61 0 chr17 31517727 31517776 -53920704 - MIR SINE MIR -56 152 101 830 306 92 22 chr17 31518171 31518583 -53919897 + MLT1J2 LTR MaLR 10 450 0 221 222 32 16 chr17 31518604 31518667 -53919813 + MER5A DNA MER1_type 115 178 -11 279 133 0 0 chr17 31519282 31519327 -53919153 + (CA)n Simple_repeat Simple_repeat 2 46 0 471 303 66 20 chr17 31520727 31520964 -53917516 + MIR SINE MIR 6 256 -6 1800 164 3 14 chr17 31521329 31521710 -53916770 - AluSx SINE Alu 0 379 2 3380 117 15 52 chr17 31521874 31522470 -53916010 + MER4B LTR ERV1 1 574 -36 5073 106 6 1 chr17 31522579 31523267 -53915213 + LTR8 LTR ERV1 1 691 0 950 112 13 26 chr17 31523576 31523728 -53914752 + LTR8A LTR ERV1 1 150 -577 5543 101 21 74 chr17 31523762 31524170 -53914310 + L1PA15 LINE L1 4256 4684 -1481 1928 146 42 0 chr17 31524170 31524457 -53914023 + AluSx SINE Alu 1 299 -13 5543 101 21 74 chr17 31524457 31525802 -53912678 + L1PA15 LINE L1 4684 5936 -229 1830 155 3 56 chr17 31525802 31526124 -53912356 + AluJo SINE Alu 6 310 -2 5543 101 21 74 chr17 31526124 31526341 -53912139 + L1PA15 LINE L1 5936 6163 -2 3233 145 116 64 chr17 31526478 31526978 -53911502 + LTR8A LTR ERV1 1 473 -254 1720 180 10 3 chr17 31526978 31527267 -53911213 + AluJb SINE Alu 2 292 -20 1198 84 6 6 chr17 31527271 31527449 -53911031 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 3233 145 116 64 chr17 31527449 31527632 -53910848 + LTR8A LTR ERV1 475 725 -2 303 93 0 0 chr17 31528044 31528087 -53910393 + (CA)n Simple_repeat Simple_repeat 1 43 0 688 260 48 26 chr17 31528477 31528704 -53909776 - MIR SINE MIR 0 262 31 260 310 35 0 chr17 31529101 31529214 -53909266 + MIR SINE MIR 134 250 -12 409 198 22 11 chr17 31531035 31531126 -53907354 - MER113 DNA MER1_type? -73 448 357 180 97 0 0 chr17 31531141 31531172 -53907308 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 458 251 42 12 chr17 31531262 31531429 -53907051 - MER113 DNA MER1_type? -326 195 24 374 278 65 29 chr17 31531978 31532147 -53906333 + MIR SINE MIR 19 194 -60 2182 96 20 3 chr17 31532219 31532511 -53905969 - AluSq SINE Alu -16 297 1 29 0 0 0 chr17 31532517 31532546 -53905934 + AT_rich Low_complexity Low_complexity 1 29 0 2880 191 6 32 chr17 31533374 31533440 -53905040 - MLT2B1 LTR ERVL 0 520 454 2091 128 10 0 chr17 31533440 31533913 -53904567 + AluSx SINE Alu 1 476 0 1288 45 11 6 chr17 31533737 31533937 -53904543 + (GAAA)n Simple_repeat Simple_repeat 2 202 0 2880 191 6 32 chr17 31533913 31534392 -53904088 - MLT2B1 LTR ERVL -66 454 10 236 329 86 7 chr17 31534664 31534804 -53903676 - L2 LINE L2 -558 2756 2606 217 295 50 50 chr17 31534896 31535035 -53903445 + L2 LINE L2 3175 3313 0 270 0 0 0 chr17 31535096 31535126 -53903354 + (TTA)n Simple_repeat Simple_repeat 1 30 0 355 254 27 18 chr17 31536199 31536309 -53902171 + MIR SINE MIR 36 146 -62 237 289 0 79 chr17 31536990 31537104 -53901376 + MIR SINE MIR 13 116 -92 184 265 0 0 chr17 31537521 31537570 -53900910 + L2 LINE L2 3265 3313 0 193 259 19 19 chr17 31538764 31538818 -53899662 - L2 LINE L2 -994 2320 2267 677 280 31 59 chr17 31538944 31539230 -53899250 - Charlie8 DNA MER1_type -2164 253 2 2154 142 0 0 chr17 31539261 31539570 -53898910 + AluSq SINE Alu 1 309 -4 270 307 60 37 chr17 31540974 31541167 -53897313 + MIR3 SINE MIR 7 197 -58 402 85 0 0 chr17 31542300 31542359 -53896121 + (CA)n Simple_repeat Simple_repeat 2 60 0 263 221 130 13 chr17 31542507 31542584 -53895896 - L2 LINE L2 -17 3296 3211 242 282 26 0 chr17 31543241 31543319 -53895161 - L2 LINE L2 -4 3309 3230 462 266 67 10 chr17 31543741 31543939 -53894541 - MIR SINE MIR -51 211 3 2287 118 0 0 chr17 31544167 31544473 -53894007 + AluSx SINE Alu 1 306 -6 194 196 130 0 chr17 31544482 31544528 -53893952 - MER5A DNA MER1_type -86 103 52 357 161 37 0 chr17 31544774 31544855 -53893625 + MER5A DNA MER1_type 28 111 -78 303 215 103 19 chr17 31545894 31546001 -53892479 + MIR3 SINE MIR 82 197 -11 526 245 61 0 chr17 31548570 31548717 -53889763 + MIR SINE MIR 87 242 -20 210 238 12 88 chr17 31552117 31552197 -53886283 - L2 LINE L2 -677 2637 2564 804 180 20 0 chr17 31553402 31553552 -53884928 - MLT1D-int LTR MaLR -1218 153 1 1914 194 63 73 chr17 31553552 31554015 -53884465 - MLT1D LTR MaLR 0 505 46 2278 107 30 0 chr17 31554015 31554314 -53884166 - AluSx SINE Alu -4 308 1 1914 194 63 73 chr17 31554314 31554340 -53884140 - MLT1D LTR MaLR -459 46 21 8844 201 35 30 chr17 31555668 31556557 -53881923 - L1MB2 LINE L1 -7 6164 5281 2022 144 3 3 chr17 31556557 31556856 -53881624 - AluSq SINE Alu -14 299 1 8844 201 35 30 chr17 31556856 31557074 -53881406 - L1MB2 LINE L1 -890 5281 5066 2124 139 3 0 chr17 31557074 31557368 -53881112 + AluSq SINE Alu 1 295 -18 8844 201 35 30 chr17 31557368 31557497 -53880983 - L1MB2 LINE L1 -1105 5066 4939 2421 65 7 0 chr17 31557497 31557790 -53880690 - AluSp SINE Alu -17 296 2 8844 201 35 30 chr17 31557790 31559774 -53878706 - L1MB2 LINE L1 -1232 4939 2922 600 198 0 0 chr17 31559750 31559856 -53878624 - L1MD3 LINE L1 -10 7985 7880 * 249 301 14 14 chr17 31559996 31560069 -53878411 - MLT1I LTR MaLR -242 167 95 414 283 57 28 chr17 31560370 31560547 -53877933 - MIR SINE MIR 0 262 81 236 289 74 52 chr17 31560762 31560897 -53877583 - MER117 DNA MER1_type -44 153 16 1792 155 30 0 chr17 31560947 31561244 -53877236 - L1MB1 LINE L1 -175 5993 5688 960 250 177 26 chr17 31561239 31562152 -53876328 + L1M4c LINE L1 1560 2634 -3748 * 22 0 0 0 chr17 31562168 31562190 -53876290 + AT_rich Low_complexity Low_complexity 1 22 0 200 111 67 44 chr17 31562606 31562651 -53875829 + A-rich Low_complexity Low_complexity 2 47 0 328 218 26 0 chr17 31563375 31563453 -53875027 + MLT1J2 LTR MaLR 10 89 -501 357 24 0 0 chr17 31563508 31563550 -53874930 + (CA)n Simple_repeat Simple_repeat 1 42 0 325 181 24 60 chr17 31563658 31563741 -53874739 + MLT1G1 LTR MaLR 516 595 0 188 276 95 35 chr17 31564519 31564635 -53873845 - MIR SINE MIR -67 141 19 24 32 0 0 chr17 31566004 31566035 -53872445 + AT_rich Low_complexity Low_complexity 1 31 0 2309 177 72 5 chr17 31566832 31567262 -53871218 - LTR24 LTR ERV1 -1 466 8 182 292 50 67 chr17 31567717 31567837 -53870643 - MER5A DNA MER1_type -24 165 48 490 277 236 34 chr17 31568038 31568330 -53870150 + MLT1J2 LTR MaLR 67 417 -33 689 78 0 10 chr17 31568864 31568966 -53869514 + (GGAGAA)n Simple_repeat Simple_repeat 2 102 0 1447 75 0 0 chr17 31569335 31569523 -53868957 - L1PA6 LINE L1 0 6154 5967 489 296 137 51 chr17 31569917 31570268 -53868212 + MLT1J2 LTR MaLR 67 447 -3 1659 168 21 7 chr17 31570373 31570664 -53867816 + AluJo SINE Alu 1 295 -17 33 25 0 0 chr17 31570664 31570704 -53867776 + AT_rich Low_complexity Low_complexity 1 40 0 295 289 86 8 chr17 31570768 31570896 -53867584 + MIR SINE MIR 93 230 -32 261 163 0 0 chr17 31571405 31571454 -53867026 + T-rich Low_complexity Low_complexity 1 49 0 30354 108 12 13 chr17 31571456 31577234 -53861246 + L1PA7 LINE L1 680 6469 0 2061 149 0 3 chr17 31577913 31578215 -53860265 - AluSx SINE Alu -11 301 1 546 330 55 0 chr17 31578234 31578452 -53860028 - MIR SINE MIR 0 262 33 308 206 111 56 chr17 31578618 31578744 -53859736 - MER117 DNA MER1_type -42 155 23 655 309 42 58 chr17 31580474 31580856 -53857624 - MLT1I LTR MaLR -33 376 1 39 0 0 0 chr17 31581847 31581886 -53856594 + AT_rich Low_complexity Low_complexity 1 39 0 489 292 0 22 chr17 31582865 31583002 -53855478 + MER94 DNA DNA 1 134 0 737 293 70 29 chr17 31584587 31584901 -53853579 - LTR16A LTR ERVL -107 343 17 1310 350 33 31 chr17 31585057 31586172 -53852308 - MERVL LTR ERVL -161 5324 4201 43474 33 23 1 chr17 31586499 31592501 -53845979 - L1PA2 LINE L1 0 6155 22 951 319 67 50 chr17 31592502 31593288 -53845192 - MERVL LTR ERVL -1813 3841 3042 578 247 17 56 chr17 31593435 31593613 -53844867 - LTR16A LTR ERVL -176 274 104 244 268 32 70 chr17 31593866 31593986 -53844494 - MER5A DNA MER1_type -3 175 62 312 297 70 8 chr17 31594169 31594297 -53844183 + MIR SINE MIR 92 227 -35 260 244 37 12 chr17 31595451 31595533 -53842947 - MIR SINE MIR -15 247 164 1650 186 7 0 chr17 31597558 31597833 -53840647 + AluJb SINE Alu 1 277 -35 1989 216 52 25 chr17 31597834 31598315 -53840165 - MER9 LTR ERVK 0 511 18 224 274 23 11 chr17 31599668 31599785 -53838695 + MIR SINE MIR 33 150 -62 317 293 33 40 chr17 31600557 31600707 -53837773 - MER5A DNA MER1_type -3 186 38 309 224 190 9 chr17 31601829 31601945 -53836535 - MIR SINE MIR -118 144 8 26 0 0 0 chr17 31602767 31602793 -53835687 + AT_rich Low_complexity Low_complexity 1 26 0 525 225 130 10 chr17 31602927 31603127 -53835353 - L1ME3 LINE L1 -1 6161 5938 1541 282 81 27 chr17 31603179 31603697 -53834783 - MLT1E2 LTR MaLR 0 626 81 239 170 43 0 chr17 31603881 31603928 -53834552 - MLT1E2 LTR MaLR -559 67 19 2063 114 29 0 chr17 31603935 31604215 -53834265 - AluSx SINE Alu -24 288 1 31 44 0 0 chr17 31604360 31604405 -53834075 + AT_rich Low_complexity Low_complexity 1 45 0 316 298 51 19 chr17 31604405 31604620 -53833860 + L1ME4a LINE L1 5742 5963 -158 204 241 0 0 chr17 31604621 31604679 -53833801 + (TA)n Simple_repeat Simple_repeat 1 58 0 584 225 27 0 chr17 31604764 31604875 -53833605 + MER81 DNA DNA 1 114 0 841 120 0 0 chr17 31605269 31605386 -53833094 + FLAM_C SINE Alu 5 121 -12 836 273 45 4 chr17 31606346 31606588 -53831892 + MLT1I LTR MaLR 3 254 -155 360 279 18 9 chr17 31607572 31607683 -53830797 + MIR3 SINE MIR 49 160 -48 207 360 93 7 chr17 31607984 31608123 -53830357 + MIR3 SINE MIR 56 206 -2 405 288 62 23 chr17 31609234 31609411 -53829069 - MER117 DNA MER1_type -11 186 3 308 336 32 24 chr17 31609418 31609543 -53828937 - MIR3 SINE MIR -53 155 30 471 222 104 52 chr17 31610114 31610326 -53828154 - L1ME3 LINE L1 -3 6159 5937 401 130 29 0 chr17 31610746 31610815 -53827665 + LTR56 LTR ERV1 197 267 -178 367 109 18 0 chr17 31810819 31810874 -53627606 - AluJ/FLAM SINE Alu -245 57 2 323 235 73 59 chr17 31810881 31811017 -53627463 - L1ME3A LINE L1 0 6170 6033 2002 106 14 0 chr17 31811113 31811406 -53627074 + AluSx SINE Alu 1 297 -15 2216 102 0 3 chr17 31811411 31811716 -53626764 + AluSx SINE Alu 1 304 -8 632 177 0 65 chr17 31811758 31811882 -53626598 - FLAM_A SINE Alu -13 129 14 1579 174 13 10 chr17 31811901 31812205 -53626275 - AluJo SINE Alu -7 305 1 1154 261 90 8 chr17 31812238 31812594 -53625886 - L1ME3A LINE L1 -287 5883 5499 2048 136 0 0 chr17 31812809 31813118 -53625362 - AluSq SINE Alu -4 309 1 926 121 0 0 chr17 31813124 31813264 -53625216 - AluSg/x SINE Alu -9 303 164 1944 121 4 7 chr17 31813329 31813630 -53624850 - AluSx SINE Alu 0 301 2 615 267 32 73 chr17 31813729 31813976 -53624504 - MIR SINE MIR -6 256 20 201 178 0 0 chr17 31814151 31814196 -53624284 + T-rich Low_complexity Low_complexity 1 45 0 1944 138 0 0 chr17 31814320 31814611 -53623869 - AluSx SINE Alu -21 291 1 2240 95 0 0 chr17 31814650 31814945 -53623535 + AluSg SINE Alu 1 295 -15 1750 137 50 0 chr17 31816158 31816436 -53622044 + AluSx SINE Alu 1 292 -20 379 98 0 0 chr17 31816804 31816865 -53621615 - Alu SINE Alu 0 301 241 1017 126 0 0 chr17 31816967 31817118 -53621362 + AluSg/x SINE Alu 158 308 -2 1698 118 99 0 chr17 31817486 31817758 -53620722 - AluSx SINE Alu -13 299 1 201 346 52 47 chr17 31817906 31818117 -53620363 - MIR SINE MIR -48 214 3 2269 90 3 6 chr17 31818147 31818458 -53620022 - AluSq SINE Alu -3 310 1 472 333 13 0 chr17 31819900 31820053 -53618427 + MIR SINE MIR 51 205 -57 2020 104 7 3 chr17 31820072 31820360 -53618120 - AluSg SINE Alu -21 289 1 929 162 0 0 chr17 31820510 31820664 -53617816 - FRAM SINE Alu -14 162 9 2188 106 0 3 chr17 31820670 31820972 -53617508 - AluSc SINE Alu -8 301 1 356 278 56 28 chr17 31820983 31821127 -53617353 - L1MCa LINE L1 -4361 2065 1918 * 427 246 8 54 chr17 31821048 31821178 -53617302 + L1MCa LINE L1 1941 2064 -4362 694 147 0 59 chr17 31821181 31821317 -53617163 - FLAM_C SINE Alu -5 128 1 2111 107 33 0 chr17 31821606 31821906 -53616574 - AluSx SINE Alu -2 310 1 470 304 164 0 chr17 31822248 31822462 -53616018 - MIR SINE MIR -12 250 2 1338 188 7 18 chr17 31823164 31823440 -53615040 - AluJb SINE Alu -39 273 1 2100 123 3 0 chr17 31823575 31823876 -53614604 + AluSx SINE Alu 1 302 -10 2048 122 0 0 chr17 31823903 31824191 -53614289 + AluSg SINE Alu 1 288 -22 1890 149 13 0 chr17 31824204 31824506 -53613974 + AluJb SINE Alu 1 306 -6 2004 131 0 0 chr17 31824713 31825011 -53613469 - AluSx SINE Alu -14 298 1 22 0 0 0 chr17 31825020 31825042 -53613438 + AT_rich Low_complexity Low_complexity 1 22 0 2026 135 0 3 chr17 31825835 31826131 -53612349 - AluSx SINE Alu -17 295 1 608 253 69 6 chr17 31826137 31826311 -53612169 - L2 LINE L2 -607 2707 2523 313 223 9 107 chr17 31826716 31826828 -53611652 + MIR SINE MIR 88 188 -74 1280 84 0 0 chr17 31827170 31827337 -53611143 - AluSg SINE Alu -143 167 1 1728 138 17 27 chr17 31827470 31827766 -53610714 + AluSx SINE Alu 1 293 -19 1132 127 0 0 chr17 31828270 31828436 -53610044 - AluSg/x SINE Alu -16 296 131 195 42 0 0 chr17 31828436 31828460 -53610020 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2151 96 0 0 chr17 31828460 31828740 -53609740 - AluSc SINE Alu -28 281 2 244 261 0 29 chr17 31828948 31829017 -53609463 + GA-rich Low_complexity Low_complexity 2 68 0 381 250 183 8 chr17 31829050 31829170 -53609310 + L1MC4a LINE L1 5504 5644 -2164 632 184 7 174 chr17 31829293 31829394 -53609086 + L1MC4a LINE L1 5681 5797 -2011 2382 73 0 0 chr17 31829394 31829694 -53608786 + AluY SINE Alu 1 300 -11 632 184 7 174 chr17 31829694 31829835 -53608645 + L1MC4a LINE L1 5797 5870 -1938 1920 142 0 0 chr17 31829835 31830174 -53608306 + AluSx SINE Alu 1 339 0 632 184 7 174 chr17 31830174 31830222 -53608258 + L1MC4a LINE L1 5870 5924 -1884 331 224 56 93 chr17 31830260 31830421 -53608059 + HAL1 LINE L1 2353 2507 0 2014 125 7 0 chr17 31830425 31830730 -53607750 + AluSx SINE Alu 1 307 -5 266 200 21 14 chr17 31830778 31830859 -53607621 - MIR3 SINE MIR -7 201 89 7493 18 0 0 chr17 31830882 31831727 -53606753 - L1PA3 LINE L1 0 6155 5311 916 26 0 8 chr17 31831722 31831839 -53606641 + L1PA3 LINE L1 5214 5329 -817 * 1774 147 3 34 chr17 31832221 31832541 -53605939 - AluJo SINE Alu -2 310 1 313 119 0 0 chr17 31832549 31832591 -53605889 - AluSp/q SINE Alu -30 273 232 1972 129 0 0 chr17 31832611 31832890 -53605590 - AluSq SINE Alu -34 279 1 1979 117 0 3 chr17 31833615 31833944 -53604536 - AluSx SINE Alu 0 328 1 2050 131 3 6 chr17 31834335 31834648 -53603832 - AluSx SINE Alu 0 312 1 201 394 32 21 chr17 31834956 31835050 -53603430 + L3b LINE CR1 1442 1536 -47 456 283 77 73 chr17 31835680 31835824 -53602656 + MIR3 SINE MIR 15 157 -104 2184 92 0 3 chr17 31835824 31836116 -53602364 - AluY SINE Alu -20 291 1 2001 117 7 0 chr17 31836116 31836407 -53602073 - AluSx SINE Alu -19 293 1 456 283 77 73 chr17 31836407 31836466 -53602014 + MIR3 SINE MIR 156 219 -42 2480 74 0 0 chr17 31836734 31837045 -53601435 + AluSp SINE Alu 1 311 -2 800 176 0 0 chr17 31837117 31837242 -53601238 - FLAM_C SINE Alu -16 127 3 245 250 0 44 chr17 31837244 31837312 -53601168 - L2 LINE L2 -1519 1795 1731 1778 159 7 0 chr17 31837775 31838064 -53600416 + AluSx SINE Alu 1 291 -21 2052 97 7 27 chr17 31838142 31838442 -53600038 + AluSg SINE Alu 1 294 -16 526 303 74 6 chr17 31838688 31838863 -53599617 + MIR3 SINE MIR 5 191 -17 2462 60 0 0 chr17 31838888 31839187 -53599293 - AluY SINE Alu -12 299 1 25 0 0 0 chr17 31839241 31839266 -53599214 + AT_rich Low_complexity Low_complexity 1 25 0 610 187 9 0 chr17 31839266 31839373 -53599107 - FLAM_C SINE Alu -25 118 11 2130 112 0 3 chr17 31839389 31839702 -53598778 - AluSx SINE Alu 0 312 1 252 0 0 0 chr17 31839707 31839735 -53598745 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1315 139 0 51 chr17 31839741 31839978 -53598502 - AluSx SINE Alu -24 288 64 180 111 0 0 chr17 31840081 31840108 -53598372 + (A)n Simple_repeat Simple_repeat 1 27 0 657 148 19 0 chr17 31840109 31840217 -53598263 + AluJo SINE Alu 120 229 -83 193 225 0 157 chr17 31840242 31840280 -53598200 - MER5A DNA MER1_type -108 81 63 2328 59 3 16 chr17 31840280 31840586 -53597894 - AluY SINE Alu -8 303 2 193 225 0 157 chr17 31840586 31840636 -53597844 - MER5A DNA MER1_type -126 63 7 185 269 39 0 chr17 31840822 31840874 -53597606 + L2 LINE L2 3169 3222 -91 2219 133 62 3 chr17 31841010 31841378 -53597102 - MLT1B LTR MaLR 0 390 1 2114 96 7 3 chr17 31841946 31842238 -53596242 + AluSc SINE Alu 6 298 -11 823 172 6 58 chr17 31842592 31842766 -53595714 - FAM SINE Alu -10 165 1 24 0 0 0 chr17 31843834 31843858 -53594622 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 31843961 31843990 -53594490 + GC_rich Low_complexity Low_complexity 1 29 0 2184 109 0 0 chr17 31845740 31846052 -53592428 - AluSx SINE Alu 0 312 1 2188 87 3 0 chr17 31846586 31846872 -53591608 + AluY SINE Alu 2 288 -23 1876 123 13 7 chr17 31847074 31847374 -53591106 - AluSx SINE Alu -10 302 1 2112 92 3 7 chr17 31847379 31847686 -53590794 - AluSp SINE Alu 0 306 1 2061 118 0 0 chr17 31847687 31847984 -53590496 - AluSg SINE Alu -13 297 1 2028 121 13 0 chr17 31847990 31848295 -53590185 - AluSx SINE Alu -3 309 1 1356 188 16 36 chr17 31848309 31848617 -53589863 - AluJo SINE Alu -10 302 1 1703 191 0 0 chr17 31849139 31849433 -53589047 - AluJo SINE Alu -17 295 2 2200 101 10 0 chr17 31849594 31849901 -53588579 - AluSx SINE Alu -2 310 1 237 344 214 16 chr17 31850160 31850352 -53588128 - L3 LINE CR1 -9 1568 1339 1457 166 7 62 chr17 31850511 31850819 -53587661 - AluJb SINE Alu -9 303 13 2190 76 41 0 chr17 31851042 31851332 -53587148 + AluY SINE Alu 1 302 -9 736 162 0 8 chr17 31851408 31851525 -53586955 + FLAM_C SINE Alu 2 117 -26 2035 115 3 13 chr17 31851766 31852079 -53586401 - AluSx SINE Alu -2 310 1 1849 122 7 24 chr17 31852088 31852408 -53586072 - AluSx SINE Alu 0 315 1 1886 102 4 0 chr17 31852447 31852701 -53585779 - AluSp SINE Alu -58 255 1 1042 180 0 0 chr17 31852710 31852893 -53585587 - AluJb SINE Alu -1 311 129 1562 167 26 29 chr17 31852899 31853211 -53585269 - AluJo SINE Alu -1 311 1 416 241 31 0 chr17 31853250 31853372 -53585108 - L1MC4 LINE L1 -447 7408 7202 357 155 18 5 chr17 31853372 31853449 -53585031 + Alu SINE Alu 1 50 -249 1862 157 0 0 chr17 31853549 31853842 -53584638 - AluSx SINE Alu -18 294 2 1656 204 138 67 chr17 31853842 31854450 -53584030 - MER20B DNA MER1_type -109 674 24 256 321 0 9 chr17 31854467 31854576 -53583904 + L1MC/D LINE L1 5775 5882 -1926 254 111 0 0 chr17 31854597 31854642 -53583838 - AluSp/q SINE Alu 0 303 259 1033 142 29 29 chr17 31854742 31854946 -53583534 + AluJb SINE Alu 108 311 -1 1525 154 4 36 chr17 31854946 31855226 -53583254 + AluJo SINE Alu 22 292 -20 339 190 17 0 chr17 31855897 31855955 -53582525 - AluJ/FLAM SINE Alu -237 65 7 2138 127 0 0 chr17 31856383 31856690 -53581790 + AluSq SINE Alu 6 312 -1 674 158 0 0 chr17 31856796 31856897 -53581583 - FLAM_C SINE Alu -36 107 7 1521 175 0 55 chr17 31857209 31857518 -53580962 + AluJb SINE Alu 1 292 -20 243 161 13 161 chr17 31857543 31857610 -53580870 - L1MC4 LINE L1 0 8042 7967 2003 131 0 16 chr17 31857610 31857785 -53580695 - AluSx SINE Alu -4 308 139 2237 97 0 0 chr17 31857785 31858083 -53580397 - AluSg SINE Alu -12 298 1 2003 131 0 16 chr17 31858083 31858220 -53580260 - AluSx SINE Alu -173 139 1 1634 152 22 0 chr17 31858221 31858534 -53579946 - AluSx SINE Alu 0 319 1 243 161 13 161 chr17 31858534 31858612 -53579868 - L1MC4 LINE L1 -74 7968 7916 2179 97 13 0 chr17 31858828 31859128 -53579352 + AluSg SINE Alu 1 304 -6 872 186 11 34 chr17 31860332 31860509 -53577971 - AluJo SINE Alu -138 174 2 2319 89 20 0 chr17 31862657 31862961 -53575519 + AluSg SINE Alu 1 310 0 2493 74 0 10 chr17 31863175 31863487 -53574993 + AluSq SINE Alu 1 309 -4 2244 103 3 0 chr17 31864836 31865126 -53573354 - AluSx SINE Alu -21 291 1 1742 110 13 0 chr17 31865249 31865486 -53572994 - AluSq SINE Alu -14 299 60 1376 113 80 0 chr17 31865810 31866023 -53572457 - MER30 DNA MER1_type 0 230 1 211 322 110 0 chr17 31866025 31866143 -53572337 + MIR SINE MIR 91 221 -41 1481 131 0 9 chr17 31866168 31866382 -53572098 + AluJo SINE Alu 87 298 -14 791 228 145 4 chr17 31866403 31866631 -53571849 + MIR SINE MIR 3 262 0 2605 53 0 3 chr17 31866681 31866983 -53571497 + AluY SINE Alu 1 301 -10 692 208 57 13 chr17 31868589 31868748 -53569732 + FRAM SINE Alu 1 166 0 2162 101 0 17 chr17 31869051 31869370 -53569110 - AluSg SINE Alu 0 314 1 304 244 17 50 chr17 31869383 31869502 -53568978 - MER5A DNA MER1_type -9 180 66 213 175 0 0 chr17 31869849 31869889 -53568591 + L2 LINE L2 3274 3313 0 1821 135 103 19 chr17 31870371 31870682 -53567798 + MER1B DNA MER1_type 1 337 0 735 218 0 0 chr17 31870735 31870868 -53567612 - FLAM_A SINE Alu 0 133 1 2066 132 10 6 chr17 31871172 31871483 -53566997 + AluSx SINE Alu 1 312 0 739 176 0 0 chr17 31871505 31871624 -53566856 + FLAM_C SINE Alu 3 121 -12 1870 135 21 4 chr17 31871792 31872073 -53566407 + AluSx SINE Alu 10 295 -17 2286 97 0 29 chr17 31873162 31873471 -53565009 + AluSx SINE Alu 1 300 -12 2386 89 0 3 chr17 31875111 31875413 -53563067 - AluSx SINE Alu -11 301 1 1890 139 3 10 chr17 31875414 31875708 -53562772 - AluSx SINE Alu -16 296 5 401 157 24 0 chr17 31875778 31875861 -53562619 + AluJ/FRAM SINE Alu 228 312 0 1535 167 51 31 chr17 31877246 31877382 -53561098 + AluJb SINE Alu 2 134 -178 1969 86 75 14 chr17 31877382 31877661 -53560819 + AluSp SINE Alu 1 296 -17 1535 167 51 31 chr17 31877661 31877818 -53560662 + AluJb SINE Alu 134 301 -11 1207 133 67 0 chr17 31877859 31878054 -53560426 - MER3 DNA MER1_type -1 208 1 32 111 0 0 chr17 31879773 31879917 -53558563 + GC_rich Low_complexity Low_complexity 1 144 0 28 48 0 0 chr17 31880227 31880269 -53558211 + GC_rich Low_complexity Low_complexity 1 42 0 1776 113 8 0 chr17 31881243 31881482 -53556998 + AluSq SINE Alu 60 300 -13 321 296 92 83 chr17 31883030 31883184 -53555296 - MARNA DNA Mariner -173 413 262 2061 105 45 0 chr17 31883184 31883470 -53555010 + AluSx SINE Alu 1 299 -13 2248 111 0 19 chr17 31883472 31883788 -53554692 + AluSg SINE Alu 1 310 0 321 296 92 83 chr17 31883788 31883978 -53554502 - MARNA DNA Mariner -324 262 63 276 333 102 0 chr17 31883861 31884008 -53554472 + MARNA DNA Mariner 394 555 -31 * 248 183 100 0 chr17 31884008 31884068 -53554412 + MIR SINE MIR 197 262 0 1046 157 0 0 chr17 31884704 31884857 -53553623 - AluJb SINE Alu -25 287 135 2301 99 0 0 chr17 31885675 31885969 -53552511 + AluSx SINE Alu 1 294 -18 2279 108 7 0 chr17 31886235 31886540 -53551940 + AluSx SINE Alu 1 307 -5 1787 64 5 0 chr17 31888393 31888611 -53549869 - AluSp SINE Alu -16 297 79 319 328 113 38 chr17 31888826 31888945 -53549535 - MIR SINE MIR -6 256 147 873 143 0 0 chr17 31888945 31889078 -53549402 + FLAM_C SINE Alu 1 133 0 319 328 113 38 chr17 31889078 31889196 -53549284 - MIR SINE MIR -115 147 1 403 310 76 0 chr17 31889231 31889376 -53549104 + MIR SINE MIR 105 260 -2 2061 145 0 0 chr17 31889516 31889812 -53548668 - AluSx SINE Alu -16 296 1 2143 108 17 7 chr17 31890441 31890737 -53547743 - AluSx SINE Alu -12 300 2 2024 148 3 0 chr17 31891183 31891473 -53547007 - AluJb SINE Alu -21 291 1 968 154 18 72 chr17 31891596 31891817 -53546663 + L1MC5 LINE L1 7702 7910 -51 2271 102 0 3 chr17 31892452 31892747 -53545733 - AluSx SINE Alu -18 294 1 2192 102 10 7 chr17 31892758 31893053 -53545427 - AluSx SINE Alu -16 296 1 984 58 0 43 chr17 31893622 31893761 -53544719 - AluSg/x SINE Alu 0 310 178 1094 127 0 66 chr17 31893877 31894058 -53544422 + FRAM SINE Alu 1 162 -14 2073 153 0 0 chr17 31894058 31894366 -53544114 + AluSx SINE Alu 1 308 -4 217 309 0 0 chr17 31894535 31894603 -53543877 - MIR SINE MIR -109 153 86 1803 163 3 3 chr17 31894666 31894948 -53543532 + AluJb SINE Alu 1 282 -30 351 60 0 0 chr17 31894951 31895001 -53543479 + (CA)n Simple_repeat Simple_repeat 1 50 0 186 83 21 42 chr17 31895129 31895177 -53543303 + (TA)n Simple_repeat Simple_repeat 1 47 0 2746 76 3 0 chr17 31895361 31895716 -53542764 + L1PA13 LINE L1 5805 6160 -3 2100 119 10 3 chr17 31895843 31896136 -53542344 + AluSx SINE Alu 1 295 -17 2100 153 0 0 chr17 31896144 31896451 -53542029 + AluSx SINE Alu 1 307 -5 669 168 48 24 chr17 31896937 31897062 -53541418 - FLAM_C SINE Alu -1 132 5 1898 149 24 0 chr17 31897103 31897398 -53541082 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr17 31897916 31897946 -53540534 + AT_rich Low_complexity Low_complexity 1 30 0 880 139 0 0 chr17 31897948 31898077 -53540403 - FLAM_C SINE Alu -4 129 1 2237 119 0 0 chr17 31898992 31899295 -53539185 + AluSx SINE Alu 1 303 -9 333 296 46 9 chr17 31899664 31899772 -53538708 + L2 LINE L2 3188 3299 -14 650 237 8 0 chr17 31900139 31900270 -53538210 + FLAM_A SINE Alu 1 132 -1 1820 150 0 68 chr17 31900279 31900605 -53537875 - AluJo SINE Alu -8 304 1 794 255 82 5 chr17 31900747 31900955 -53537525 + MER58A DNA MER1_type 1 224 0 2297 115 0 0 chr17 31901006 31901302 -53537178 + AluSq SINE Alu 1 296 -17 577 193 24 121 chr17 31901526 31901596 -53536884 + MLT1G1 LTR MaLR 5 51 -544 1839 168 0 3 chr17 31901596 31901894 -53536586 - AluJb SINE Alu -13 299 3 577 193 24 121 chr17 31901894 31901989 -53536491 + MLT1G1 LTR MaLR 51 154 -441 824 197 33 11 chr17 31901989 31902172 -53536308 + AluJo SINE Alu 120 306 -6 1242 226 134 50 chr17 31902172 31902553 -53535927 + MLT1G3 LTR MaLR 85 497 -33 1590 197 3 10 chr17 31902555 31902849 -53535631 + AluJo SINE Alu 1 292 -20 2220 100 14 3 chr17 31903222 31903511 -53534969 + AluSq SINE Alu 1 292 -21 361 215 201 14 chr17 31903597 31903741 -53534739 + MER5A DNA MER1_type 13 183 -6 2270 87 3 3 chr17 31905209 31905521 -53532959 + AluSq SINE Alu 1 312 0 999 144 6 33 chr17 31905535 31905716 -53532764 + FRAM SINE Alu 1 176 0 630 108 0 21 chr17 31905727 31905820 -53532660 + THE1C LTR MaLR 1 91 -284 2511 81 0 0 chr17 31906232 31906541 -53531939 + AluSc SINE Alu 1 309 0 219 36 0 0 chr17 31906710 31906738 -53531742 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 203 255 0 0 chr17 31907556 31907603 -53530877 + CT-rich Low_complexity Low_complexity 1 47 0 627 200 16 0 chr17 31907699 31907824 -53530656 + FLAM_A SINE Alu 11 137 -5 2608 57 0 0 chr17 31907905 31908203 -53530277 + AluY SINE Alu 1 298 -13 342 181 37 0 chr17 31908749 31908828 -53529652 + L1ME3A LINE L1 5532 5615 -555 446 248 135 0 chr17 31908833 31908935 -53529545 + L1ME3A LINE L1 5705 5832 -338 965 87 0 36 chr17 31908935 31909073 -53529407 + FLAM_C SINE Alu 1 133 0 446 248 135 0 chr17 31909073 31909111 -53529369 + L1ME3A LINE L1 5832 5864 -306 309 109 0 0 chr17 31909159 31909205 -53529275 + (CA)n Simple_repeat Simple_repeat 2 47 0 184 314 85 51 chr17 31909575 31909693 -53528787 + L2 LINE L2 3147 3268 -4 1979 78 4 4 chr17 31911125 31911370 -53527110 - AluSp SINE Alu -68 245 1 1929 130 3 59 chr17 31911371 31911693 -53526787 - AluSx SINE Alu -8 304 1 781 227 16 0 chr17 31911848 31912033 -53526447 - MIR SINE MIR 0 262 75 425 259 30 8 chr17 31912033 31912164 -53526316 - MER104 DNA Tc2 0 180 47 1534 181 0 32 chr17 31912165 31912447 -53526033 - AluJo SINE Alu -15 297 25 21 36 0 0 chr17 31912467 31912495 -53525985 + AT_rich Low_complexity Low_complexity 1 28 0 883 179 6 13 chr17 31912498 31912654 -53525826 - FRAM SINE Alu -21 155 1 238 159 0 0 chr17 31912661 31912705 -53525775 - HsTC2 DNA Tc2 -1854 44 1 2144 113 17 3 chr17 31912904 31913204 -53525276 + AluSg SINE Alu 3 306 -4 984 170 0 0 chr17 31913217 31913370 -53525110 + FRAM SINE Alu 5 157 -19 2113 132 0 10 chr17 31914212 31914508 -53523972 + AluSx SINE Alu 1 293 -19 1465 212 62 44 chr17 31914662 31915067 -53523413 - MLT1E2 LTR MaLR -8 618 207 981 164 20 0 chr17 31915112 31915264 -53523216 - AluJb SINE Alu -27 285 131 2557 84 0 0 chr17 31915280 31915590 -53522890 + AluY SINE Alu 1 310 -1 681 145 0 60 chr17 31915638 31915755 -53522725 - FLAM_C SINE Alu -32 111 2 586 209 7 68 chr17 31915769 31915917 -53522563 - MLT1E2 LTR MaLR -424 200 62 29 28 0 0 chr17 31915944 31915980 -53522500 + AT_rich Low_complexity Low_complexity 1 36 0 819 144 0 0 chr17 31915980 31916098 -53522382 - AluJb SINE Alu -194 118 1 202 325 44 26 chr17 31917101 31917215 -53521265 - MER5B DNA MER1_type 0 178 63 565 207 44 7 chr17 31917702 31917837 -53520643 - MLT1H1 LTR MaLR 0 555 416 504 250 6 30 chr17 31917999 31918078 -53520402 - L1MC5 LINE L1 -85 7876 7797 2135 122 30 0 chr17 31918078 31918381 -53520099 - AluSx SINE Alu 0 312 1 504 250 6 30 chr17 31918381 31918465 -53520015 - L1MC5 LINE L1 -164 7797 7717 2401 197 20 61 chr17 31918541 31918671 -53519809 - L1ME2 LINE L1 -173 5991 5857 2171 107 10 13 chr17 31918671 31918981 -53519499 - AluSx SINE Alu -1 311 3 2401 197 20 61 chr17 31918981 31919439 -53519041 - L1ME2 LINE L1 -307 5857 5427 198 0 0 0 chr17 31919443 31919465 -53519015 + (T)n Simple_repeat Simple_repeat 1 22 0 308 223 58 58 chr17 31919465 31919586 -53518894 - L1MC5 LINE L1 -370 7591 7471 24 67 0 0 chr17 31919601 31919646 -53518834 + AT_rich Low_complexity Low_complexity 1 45 0 825 161 0 0 chr17 31919652 31919770 -53518710 - AluJb SINE Alu -194 118 1 663 158 42 0 chr17 31919773 31919893 -53518587 - L1MD3 LINE L1 -31 7964 7840 1574 211 3 3 chr17 31919893 31920187 -53518293 + AluJo SINE Alu 1 294 -18 2021 149 0 3 chr17 31920188 31920484 -53517996 + AluSx SINE Alu 1 295 -17 1813 177 7 0 chr17 31920626 31920920 -53517560 - AluJb SINE Alu -16 296 1 198 0 0 0 chr17 31921581 31921603 -53516877 + (A)n Simple_repeat Simple_repeat 1 22 0 268 381 38 12 chr17 31921609 31921769 -53516711 + MIR SINE MIR 20 183 -79 2135 122 0 3 chr17 31921838 31922132 -53516348 + AluSg SINE Alu 3 295 -15 2075 143 0 7 chr17 31922687 31922988 -53515492 - AluSx SINE Alu -13 299 1 2189 78 25 14 chr17 31923560 31923886 -53514594 + AluSp SINE Alu 1 329 0 258 305 30 54 chr17 31924038 31924205 -53514275 - MIR SINE MIR -10 252 90 1724 184 0 0 chr17 31924210 31924514 -53513966 + AluJb SINE Alu 1 304 0 983 178 18 0 chr17 31924519 31924682 -53513798 + FRAM SINE Alu 1 158 -18 2143 126 0 0 chr17 31926106 31926400 -53512080 + AluSx SINE Alu 1 294 -18 2593 58 0 7 chr17 31926402 31926710 -53511770 + AluY SINE Alu 1 306 -5 2146 119 7 0 chr17 31927128 31927430 -53511050 + AluSx SINE Alu 1 304 -8 1276 186 5 5 chr17 31927771 31927991 -53510489 + AluJo SINE Alu 1 220 -92 2130 58 46 0 chr17 31928163 31928424 -53510056 - AluY SINE Alu -14 297 25 1768 222 97 29 chr17 31928481 31928959 -53509521 - HAL1 LINE L1 -832 1675 1148 1861 115 79 4 chr17 31928959 31929238 -53509242 - AluSx SINE Alu -12 300 1 1768 222 97 29 chr17 31929238 31929345 -53509135 - HAL1 LINE L1 -1359 1148 1050 787 144 0 50 chr17 31929368 31929507 -53508973 - FLAM_C SINE Alu -1 132 1 1226 155 21 10 chr17 31929545 31929739 -53508741 + AluJo SINE Alu 12 207 -105 2290 110 48 20 chr17 31929740 31930094 -53508386 - THE1B LTR MaLR 0 364 1 2483 77 0 0 chr17 31930094 31930404 -53508076 - THE1B-int LTR MaLR 0 1580 1271 2526 72 0 3 chr17 31930404 31930708 -53507772 - AluY SINE Alu -8 303 1 259 214 0 0 chr17 31930709 31930765 -53507715 - L1PA14 LINE L1 -122 6039 5984 1290 103 0 0 chr17 31930795 31930960 -53507520 - AluSg/x SINE Alu -14 296 132 298 101 58 29 chr17 31930960 31931029 -53507451 - L1MD3 LINE L1 -120 7875 7805 774 243 23 0 chr17 31931036 31931209 -53507271 - AluJo SINE Alu -16 296 120 1417 189 8 0 chr17 31931210 31931474 -53507006 - L1MD3 LINE L1 -205 7790 7525 1853 236 153 40 chr17 31931490 31931776 -53506704 - HAL1 LINE L1 -1542 965 713 1999 100 4 0 chr17 31931776 31932036 -53506444 + AluSg SINE Alu 1 261 -49 1853 236 153 40 chr17 31932036 31932534 -53505946 - HAL1 LINE L1 -1794 713 92 2128 121 0 0 chr17 31932536 31932851 -53505629 - AluSx SINE Alu 0 315 1 714 151 0 0 chr17 31932873 31932979 -53505501 - FLAM_C SINE Alu -36 107 2 266 169 0 84 chr17 31932986 31933069 -53505411 + T-rich Low_complexity Low_complexity 1 76 0 24 32 0 0 chr17 31933215 31933246 -53505234 + AT_rich Low_complexity Low_complexity 1 31 0 2374 104 0 0 chr17 31933344 31933642 -53504838 - AluSg1 SINE Alu -11 298 1 2366 100 0 0 chr17 31933849 31934150 -53504330 + AluSx SINE Alu 1 301 -11 1718 162 62 3 chr17 31934174 31934464 -53504016 - AluJb SINE Alu -5 307 1 317 247 0 43 chr17 31934601 31934694 -53503786 + L1MC4 LINE L1 6615 6703 -1339 2066 132 7 0 chr17 31934699 31935009 -53503471 - AluSx SINE Alu 0 312 1 2271 114 3 0 chr17 31935430 31935727 -53502753 - AluSx SINE Alu -14 298 1 456 307 129 0 chr17 31935727 31935952 -53502528 + MER112 DNA MER1_type 6 259 -1 878 178 18 6 chr17 31936051 31936214 -53502266 - FAM SINE Alu -13 172 8 451 262 47 52 chr17 31936566 31936738 -53501742 - MER5B DNA MER1_type -1 177 7 242 271 0 17 chr17 31938103 31938162 -53500318 + CT-rich Low_complexity Low_complexity 5 62 0 2184 103 13 19 chr17 31938169 31938480 -53500000 - AluSx SINE Alu -3 309 1 240 75 0 0 chr17 31938508 31938548 -53499932 - AluSx SINE Alu 0 302 263 1705 84 14 5 chr17 31938548 31938761 -53499719 - AluSx SINE Alu -97 215 1 401 93 0 0 chr17 31938761 31938815 -53499665 - AluSp SINE Alu -184 129 76 553 41 27 0 chr17 31938890 31938963 -53499517 - AluSc SINE Alu -11 298 224 2337 78 0 0 chr17 31938979 31939318 -53499162 - AluY SINE Alu 0 339 1 1810 172 3 0 chr17 31939381 31939671 -53498809 + AluJo SINE Alu 1 291 -21 1359 143 22 36 chr17 31939691 31939915 -53498565 - AluJo SINE Alu -8 304 84 663 179 46 33 chr17 31939995 31940146 -53498334 - MER5A DNA MER1_type -34 155 3 2701 61 0 0 chr17 31940447 31940773 -53497707 - LTR17 LTR ERV1 -454 326 1 28735 45 7 6 chr17 31940773 31944175 -53494305 - HERV17 LTR ERV1 0 8626 5220 2298 97 7 3 chr17 31944195 31944495 -53493985 - AluSx SINE Alu -11 301 1 797 176 0 0 chr17 31944501 31944632 -53493848 - FLAM_C SINE Alu 0 133 3 28 0 0 0 chr17 31944788 31944816 -53493664 + AT_rich Low_complexity Low_complexity 1 28 0 633 75 11 11 chr17 31944892 31944986 -53493494 - L1PA7 LINE L1 0 6154 6061 25 0 0 0 chr17 31945209 31945234 -53493246 + AT_rich Low_complexity Low_complexity 1 25 0 1822 149 3 50 chr17 31945281 31945417 -53493063 + AluJo SINE Alu 1 142 -170 2291 115 0 0 chr17 31945417 31945713 -53492767 + AluSg1 SINE Alu 1 296 -13 2161 77 33 0 chr17 31945715 31946034 -53492446 + AluY SINE Alu 1 328 0 1822 149 3 50 chr17 31946034 31946214 -53492266 + AluJo SINE Alu 143 306 -6 2347 104 0 3 chr17 31947151 31947459 -53491021 - AluSg SINE Alu -3 307 1 1989 167 0 3 chr17 31947461 31947761 -53490719 - AluSx SINE Alu -13 299 1 397 253 99 43 chr17 31948155 31948317 -53490163 - MER5B DNA MER1_type 0 178 8 180 0 0 0 chr17 31948668 31948688 -53489792 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 828 118 0 8 chr17 31948715 31948834 -53489646 - FLAM_C SINE Alu -15 118 1 297 277 106 0 chr17 31948845 31948939 -53489541 - MIR SINE MIR -67 141 38 337 303 108 32 chr17 31949169 31949354 -53489126 + MER20 DNA MER1_type 16 214 -5 259 270 112 11 chr17 31949852 31949941 -53488539 + MIR3 SINE MIR 67 164 -44 2342 103 7 0 chr17 31950263 31950573 -53487907 - AluSx SINE Alu 0 312 1 2202 92 18 0 chr17 31950573 31950855 -53487625 - AluSp SINE Alu -13 300 14 2041 142 7 3 chr17 31950894 31951196 -53487284 - AluSx SINE Alu -9 303 1 2003 99 16 53 chr17 31951460 31951763 -53486717 - AluSg SINE Alu -18 292 1 1413 235 122 64 chr17 31951765 31952179 -53486301 + L1MC4 LINE L1 5518 5907 -2135 2131 133 36 0 chr17 31952179 31952481 -53485999 + AluSq SINE Alu 1 313 0 1413 235 122 64 chr17 31952481 31953166 -53485314 + L1MC4 LINE L1 5907 7090 -952 2494 125 8 5 chr17 31953170 31953561 -53484919 + L1PA15 LINE L1 5766 6157 -8 871 182 6 29 chr17 31953649 31953819 -53484661 + FRAM SINE Alu 1 166 0 329 160 154 138 chr17 31953821 31953975 -53484505 + L1MC4 LINE L1 7894 8041 -1 203 213 16 49 chr17 31954003 31954064 -53484416 + MIR3 SINE MIR 120 178 -30 2116 84 4 0 chr17 31954133 31954395 -53484085 + AluSq SINE Alu 1 263 -50 2196 114 7 0 chr17 31955044 31955343 -53483137 + AluSp SINE Alu 1 301 -12 2180 103 17 0 chr17 31955408 31955700 -53482780 + AluSq SINE Alu 1 297 -16 1639 87 104 0 chr17 31955706 31955936 -53482544 + AluSx SINE Alu 1 254 -58 23 33 0 0 chr17 31956463 31956493 -53481987 + GC_rich Low_complexity Low_complexity 1 30 0 31 92 0 0 chr17 31956704 31956791 -53481689 + GC_rich Low_complexity Low_complexity 1 87 0 579 273 93 10 chr17 31957371 31957565 -53480915 - MIR SINE MIR -2 260 51 198 0 0 0 chr17 31957715 31957737 -53480743 + (A)n Simple_repeat Simple_repeat 1 22 0 2110 96 7 3 chr17 31957742 31958048 -53480432 + AluSq SINE Alu 2 308 0 1006 261 132 34 chr17 31958169 31958715 -53479765 - L2 LINE L2 -4 3309 2690 2399 88 3 10 chr17 31958715 31959022 -53479458 + AluSq SINE Alu 1 305 -8 1006 261 132 34 chr17 31959022 31959056 -53479424 - L2 LINE L2 -623 2690 2661 725 164 16 8 chr17 31959076 31959198 -53479282 + FLAM_A SINE Alu 1 123 -10 1935 146 20 0 chr17 31959520 31959815 -53478665 + AluSx SINE Alu 1 301 -11 1795 175 0 19 chr17 31959915 31960224 -53478256 + AluJb SINE Alu 1 303 -9 185 314 242 0 chr17 31960344 31960468 -53478012 - L2 LINE L2 -920 2394 2241 2512 68 0 0 chr17 31960621 31960916 -53477564 + AluY SINE Alu 1 295 -16 489 218 23 23 chr17 31960997 31961130 -53477350 - MER94 DNA DNA 0 134 2 212 186 29 57 chr17 31961279 31961349 -53477131 + L2 LINE L2 3014 3081 -191 21 0 0 0 chr17 31961469 31961490 -53476990 + AT_rich Low_complexity Low_complexity 1 21 0 1736 192 3 3 chr17 31961733 31962030 -53476450 + AluJb SINE Alu 1 297 -15 5347 123 30 46 chr17 31962031 31962138 -53476342 + L1MA8 LINE L1 5194 5301 -990 2108 85 11 0 chr17 31962138 31962409 -53476071 + AluSq SINE Alu 40 313 0 5347 123 30 46 chr17 31962409 31962830 -53475650 + L1MA8 LINE L1 5301 5727 -564 264 30 0 0 chr17 31962830 31962863 -53475617 + (CA)n Simple_repeat Simple_repeat 2 34 0 5347 123 30 46 chr17 31962863 31963168 -53475312 + L1MA8 LINE L1 5727 6084 -207 2358 113 0 0 chr17 31963168 31963479 -53475001 + AluSx SINE Alu 1 311 -1 5347 123 30 46 chr17 31963479 31963673 -53474807 + L1MA8 LINE L1 6084 6279 -12 26 64 0 0 chr17 31963696 31963743 -53474737 + AT_rich Low_complexity Low_complexity 1 47 0 365 288 62 50 chr17 31964239 31964307 -53474173 + MIR SINE MIR 23 89 -173 2318 101 0 3 chr17 31964307 31964605 -53473875 + AluSq SINE Alu 1 297 -16 365 288 62 50 chr17 31964605 31964696 -53473784 + MIR SINE MIR 89 184 -78 1923 150 0 7 chr17 31964704 31964997 -53473483 + AluSx SINE Alu 1 291 -21 247 278 8 75 chr17 31965768 31965901 -53472579 - MIR SINE MIR -38 224 101 1766 113 0 12 chr17 31966262 31966510 -53471970 - AluSq SINE Alu -19 294 50 2220 105 0 0 chr17 31966738 31967033 -53471447 - AluSg SINE Alu -15 295 1 344 227 13 0 chr17 31967149 31967224 -53471256 + MIR SINE MIR 30 105 -157 282 325 62 53 chr17 31967251 31967274 -53471206 - L2 LINE L2 -458 2856 2835 2208 111 14 0 chr17 31967274 31967563 -53470917 + AluSx SINE Alu 1 293 -19 282 325 62 53 chr17 31967563 31967748 -53470732 - L2 LINE L2 -479 2835 2646 3258 61 3 3 chr17 31968657 31969049 -53469431 + L1PA6 LINE L1 5751 6142 -12 2293 113 3 0 chr17 31969589 31969891 -53468589 - AluSx SINE Alu -9 303 1 497 133 200 0 chr17 31969999 31970089 -53468391 + AluSg/x SINE Alu 192 299 -13 1428 167 47 8 chr17 31970098 31970355 -53468125 - AluJo SINE Alu -45 267 1 391 267 92 0 chr17 31970952 31971072 -53467408 - MIR SINE MIR -72 190 60 2052 124 0 23 chr17 31971310 31971609 -53466871 - AluSx SINE Alu -20 292 1 180 111 0 0 chr17 31971845 31971872 -53466608 + (A)n Simple_repeat Simple_repeat 1 27 0 1145 92 0 92 chr17 31972056 31972221 -53466259 - AluSq SINE Alu -15 298 152 2300 81 7 0 chr17 31972221 31972516 -53465964 - AluSg SINE Alu -13 297 1 1145 92 0 92 chr17 31972516 31972545 -53465935 - AluSq SINE Alu -161 152 122 2112 77 0 61 chr17 31972572 31972753 -53465727 - AluSq SINE Alu -3 310 119 2322 80 3 17 chr17 31972753 31973055 -53465425 - AluSp SINE Alu -15 298 1 2242 97 3 0 chr17 31973065 31973354 -53465126 - AluSp SINE Alu -23 290 1 2112 77 0 61 chr17 31973354 31973471 -53465009 - AluSq SINE Alu -203 110 20 1619 179 31 7 chr17 31973833 31974124 -53464356 - AluJo SINE Alu -12 300 3 3733 196 26 55 chr17 31974143 31974994 -53463486 - LTR1B LTR ERV1 0 826 1 2206 65 29 59 chr17 31975479 31975659 -53462821 - AluSg SINE Alu -13 297 128 2391 77 3 6 chr17 31975659 31975971 -53462509 - AluY SINE Alu 0 311 1 2206 65 29 59 chr17 31975971 31976096 -53462384 - AluSg SINE Alu -182 128 1 558 220 143 82 chr17 31976343 31976470 -53462010 - MIR SINE MIR 0 262 144 2325 112 0 0 chr17 31976470 31976774 -53461706 - AluSx SINE Alu -8 304 1 558 220 143 82 chr17 31976774 31976891 -53461589 - MIR SINE MIR -118 144 3 2247 95 3 3 chr17 31976916 31977210 -53461270 - AluSx SINE Alu -18 294 1 1730 152 24 17 chr17 31977305 31977462 -53461018 - AluJo SINE Alu -21 291 137 207 0 0 0 chr17 31977462 31977485 -53460995 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2173 102 0 3 chr17 31977485 31977768 -53460712 - AluSg1 SINE Alu -27 282 1 1730 152 24 17 chr17 31977768 31977898 -53460582 - AluJo SINE Alu -174 138 1 361 209 77 0 chr17 31978026 31978117 -53460363 - L1ME4a LINE L1 -152 5969 5872 2173 110 7 16 chr17 31978898 31979207 -53459273 + AluSx SINE Alu 1 306 -6 333 254 81 42 chr17 31979814 31979866 -53458614 - L1ME4a LINE L1 -11 6110 6061 1717 121 94 0 chr17 31979866 31980131 -53458349 - AluSg SINE Alu -20 290 1 333 254 81 42 chr17 31980131 31980338 -53458142 - L1ME4a LINE L1 -60 6061 5841 2026 129 14 3 chr17 31980345 31980640 -53457840 - AluJb SINE Alu -14 298 1 1625 127 4 0 chr17 31980640 31980877 -53457603 - L1M1 LINE L1 -562 5738 5501 303 28 0 0 chr17 31981093 31981129 -53457351 + (TG)n Simple_repeat Simple_repeat 2 37 0 3382 221 53 14 chr17 31981296 31982053 -53456427 + MER21B LTR ERV1 1 786 -77 2573 65 3 0 chr17 31982170 31982476 -53456004 + AluSp SINE Alu 1 307 -6 2110 134 0 10 chr17 31982484 31982791 -53455689 + AluSx SINE Alu 1 304 -8 353 331 33 16 chr17 31982792 31982913 -53455567 + MER5A DNA MER1_type 66 188 -1 282 157 20 0 chr17 31982918 31982969 -53455511 + MIR SINE MIR 206 257 -5 2478 67 10 0 chr17 31983027 31983324 -53455156 + AluY SINE Alu 1 300 -11 3520 91 5 89 chr17 31983362 31983990 -53454490 - L1MA3 LINE L1 -477 5828 5254 1202 82 58 18 chr17 31984109 31984280 -53454200 - L1PA11 LINE L1 0 6174 5997 879 167 0 0 chr17 31984554 31984680 -53453800 - FLAM_C SINE Alu -6 127 2 521 238 111 29 chr17 31984876 31985048 -53453432 - MIR SINE MIR -12 250 65 793 181 8 16 chr17 31985325 31985452 -53453028 - FLAM_C SINE Alu -3 130 5 1315 119 0 0 chr17 31985527 31985704 -53452776 - AluSg/x SINE Alu -3 307 131 237 108 0 0 chr17 31985975 31986012 -53452468 + (TG)n Simple_repeat Simple_repeat 2 38 0 1565 298 135 33 chr17 31986120 31986603 -53451877 + L2 LINE L2 1670 2102 -1212 2233 115 3 3 chr17 31986603 31986915 -53451565 - AluSx SINE Alu 0 312 1 1565 298 135 33 chr17 31986915 31987352 -53451128 + L2 LINE L2 2102 2684 -630 1558 178 56 3 chr17 31987370 31987657 -53450823 - AluJo SINE Alu -10 302 1 535 297 192 50 chr17 31987696 31988101 -53450379 + L2 LINE L2 2833 3301 -12 1594 181 22 35 chr17 31988101 31988415 -53450065 + AluJo SINE Alu 1 310 -2 535 297 192 50 chr17 31988415 31988430 -53450050 + L2 LINE L2 3301 3313 0 1749 144 4 0 chr17 31988521 31988771 -53449709 - AluSx SINE Alu -61 251 1 750 263 72 7 chr17 31988791 31989084 -53449396 - L1M4 LINE L1 -2651 3495 3184 1132 224 119 2 chr17 31989127 31989529 -53448951 - L1M4 LINE L1 -3167 2979 2531 1725 167 28 11 chr17 31989538 31989851 -53448629 + AluSx SINE Alu 1 312 0 1848 236 75 8 chr17 31989857 31990374 -53448106 + L1ME3 LINE L1 5307 5858 -312 2011 126 7 10 chr17 31990428 31990722 -53447758 + AluSx SINE Alu 1 293 -19 1003 243 22 29 chr17 31990727 31991040 -53447440 + L1ME3 LINE L1 5851 6161 -1 444 299 50 53 chr17 31991058 31991216 -53447264 + L1M4b LINE L1 11 169 -6690 2607 61 0 0 chr17 31991216 31991527 -53446953 + AluY SINE Alu 1 311 0 444 299 50 53 chr17 31991527 31991649 -53446831 + L1M4b LINE L1 169 290 -6569 857 220 26 137 chr17 31992063 31992449 -53446031 + L1M4b LINE L1 1207 1549 -5310 813 164 16 0 chr17 31992476 31992604 -53445876 - AluJb SINE Alu -178 134 5 2345 62 21 0 chr17 31992618 31992909 -53445571 - AluSp SINE Alu -16 297 1 2404 198 47 88 chr17 31992943 31992966 -53445514 + L1MD2 LINE L1 5264 5286 -1073 1235 178 182 16 chr17 31992966 31993224 -53445256 + AluJo SINE Alu 2 302 0 2404 198 47 88 chr17 31993224 31994252 -53444228 + L1MD2 LINE L1 5286 5991 -368 3875 154 22 110 chr17 31993277 31993552 -53444928 + L1MB8 LINE L1 5351 5649 -529 2302 99 0 0 chr17 31993552 31993846 -53444634 - AluSx SINE Alu -18 294 1 3875 154 22 110 chr17 31993846 31994328 -53444152 + L1MB8 LINE L1 5649 6017 -161 864 129 8 16 chr17 31994328 31994452 -53444028 + FLAM_A SINE Alu 1 123 -10 3875 154 22 110 chr17 31994452 31994601 -53443879 + L1MB8 LINE L1 6017 6178 0 1788 224 18 84 chr17 31994586 31994829 -53443651 + L1M4 LINE L1 4257 4515 -1631 * 529 145 36 0 chr17 31994829 31994912 -53443568 + AluSx SINE Alu 1 86 -226 2441 68 0 23 chr17 31994912 31995219 -53443261 + AluSq SINE Alu 1 300 -13 1552 114 21 13 chr17 31995219 31995454 -53443026 + AluSx SINE Alu 73 311 -1 1788 224 18 84 chr17 31995454 31995835 -53442645 + L1M4 LINE L1 4512 4871 -1275 1512 158 24 20 chr17 31998768 31999015 -53439465 - AluJo SINE Alu -63 249 2 873 193 13 0 chr17 31999300 31999450 -53439030 + FRAM SINE Alu 1 152 -14 341 235 0 9 chr17 31999523 31999568 -53438912 + (TA)n Simple_repeat Simple_repeat 1 45 -69 2099 109 0 36 chr17 31999568 31999871 -53438609 + AluSq SINE Alu 1 292 -21 341 235 0 9 chr17 31999871 31999940 -53438540 + (TA)n Simple_repeat Simple_repeat 45 114 0 2366 93 3 0 chr17 31999961 32000262 -53438218 - AluSp SINE Alu -11 302 1 2038 131 0 0 chr17 32000405 32000688 -53437792 + AluSx SINE Alu 1 283 -29 937 144 40 46 chr17 32000696 32000817 -53437663 + MLT1A1 LTR MaLR 29 150 -215 2488 69 0 0 chr17 32000817 32001120 -53437360 + AluY SINE Alu 1 303 -8 937 144 40 46 chr17 32001120 32001171 -53437309 + MLT1A1 LTR MaLR 150 200 -165 1401 150 21 91 chr17 32001175 32001461 -53437019 + MER51B LTR ERV1 5 270 -107 2262 98 0 16 chr17 32001463 32001779 -53436701 - AluY SINE Alu 0 311 1 949 140 0 0 chr17 32001779 32001915 -53436565 - AluSq/x SINE Alu -176 136 1 846 105 0 8 chr17 32001915 32002039 -53436441 + MER51B LTR ERV1 255 377 0 1129 90 34 40 chr17 32002039 32002216 -53436264 + MER51B-int LTR ERV1 1 176 -7640 3413 153 10 17 chr17 32002230 32002807 -53435673 + MER51B-int LTR ERV1 418 990 -6826 * 8728 112 10 26 chr17 32002794 32003582 -53434898 + MER51B-int LTR ERV1 1093 1892 -5924 2143 123 10 0 chr17 32003582 32003882 -53434598 + AluSx SINE Alu 1 303 -9 8728 112 10 26 chr17 32003882 32004545 -53433935 + MER51B-int LTR ERV1 1892 2522 -5294 1941 142 0 26 chr17 32004545 32004848 -53433632 - AluSx SINE Alu -17 295 1 1205 94 62 168 chr17 32005820 32005946 -53432534 - MER30 DNA MER1_type -1 229 91 2404 82 3 3 chr17 32005946 32006249 -53432231 + AluSp SINE Alu 1 303 -10 258 32 0 0 chr17 32006259 32006290 -53432190 + (TG)n Simple_repeat Simple_repeat 2 32 0 1205 94 62 168 chr17 32006290 32006320 -53432160 - MER30 DNA MER1_type -148 82 50 2269 106 3 3 chr17 32006320 32006623 -53431857 - AluSc SINE Alu -3 306 4 1205 94 62 168 chr17 32006623 32006710 -53431770 - MER30 DNA MER1_type -180 50 1 672 251 115 17 chr17 32006788 32007023 -53431457 + MIR SINE MIR 2 259 -3 2080 137 0 3 chr17 32007079 32007371 -53431109 + AluSx SINE Alu 1 291 -21 277 244 128 23 chr17 32007373 32007459 -53431021 - L2 LINE L2 -14 3299 3205 2367 98 3 0 chr17 32008141 32008446 -53430034 - AluSx SINE Alu -5 307 2 261 143 0 0 chr17 32008474 32008516 -53429964 - L1ME1 LINE L1 -5 6161 6120 1703 166 4 4 chr17 32008534 32008812 -53429668 - AluJo SINE Alu -34 278 1 1020 225 119 7 chr17 32008812 32009090 -53429390 - L1ME1 LINE L1 -33 6133 5828 27 62 0 0 chr17 32009159 32009207 -53429273 + AT_rich Low_complexity Low_complexity 1 48 0 245 244 35 12 chr17 32009339 32009425 -53429055 + MIR SINE MIR 41 128 -80 2144 112 0 37 chr17 32009658 32009980 -53428500 - AluSx SINE Alu -2 310 1 785 269 216 36 chr17 32010364 32011036 -53427444 - LTR50 LTR ERVL -2 793 1 305 265 92 10 chr17 32011041 32011139 -53427341 - MIR SINE MIR -111 151 46 551 187 30 126 chr17 32011157 32011240 -53427240 - MER104 DNA MER2_type -1719 179 90 2102 122 7 0 chr17 32011240 32011536 -53426944 + AluSx SINE Alu 1 298 -14 551 187 30 126 chr17 32011536 32011589 -53426891 - MER104 DNA MER2_type -1808 90 65 1530 188 3 58 chr17 32011589 32011898 -53426582 - AluJb SINE Alu -20 292 1 551 187 30 126 chr17 32011898 32011958 -53426522 - MER104 DNA MER2_type -1833 65 1 343 336 21 21 chr17 32011977 32012120 -53426360 - L2 LINE L2 -952 2362 2220 823 141 16 8 chr17 32012848 32012976 -53425504 + FRAM SINE Alu 26 154 -22 2643 142 19 12 chr17 32014976 32015399 -53423081 - MSTB LTR MaLR 0 426 1 191 337 36 0 chr17 32015431 32015514 -53422966 + MIR SINE MIR 104 189 -73 2265 114 0 0 chr17 32015546 32015844 -53422636 - AluSc SINE Alu -11 298 1 315 256 84 110 chr17 32016001 32016071 -53422409 - L2 LINE L2 -167 3105 3035 2130 133 7 0 chr17 32016071 32016379 -53422101 + AluSx SINE Alu 1 310 -2 315 256 84 110 chr17 32016379 32016499 -53421981 - L2 LINE L2 -237 3035 2920 360 0 0 0 chr17 32016667 32016707 -53421773 + (TG)n Simple_repeat Simple_repeat 2 41 0 385 224 79 33 chr17 32016708 32016860 -53421620 - L1MC5 LINE L1 -58 7903 7745 1936 172 7 0 chr17 32016931 32017239 -53421241 + AluJb SINE Alu 1 310 -2 24 67 0 0 chr17 32017540 32017585 -53420895 + AT_rich Low_complexity Low_complexity 1 45 0 1069 91 0 0 chr17 32017633 32017776 -53420704 - AluSg/x SINE Alu -36 276 134 2041 84 13 58 chr17 32017776 32018085 -53420395 - AluSc SINE Alu -14 295 1 995 73 0 48 chr17 32018279 32018436 -53420044 - L1PA8A LINE L1 -657 5474 5324 911 86 0 0 chr17 32018436 32018551 -53419929 + L1PA10 LINE L1 6033 6149 -19 22 35 0 0 chr17 32018571 32018600 -53419880 + AT_rich Low_complexity Low_complexity 1 29 0 279 218 274 24 chr17 32018658 32018782 -53419698 + MIR SINE MIR 88 242 -20 2356 91 0 3 chr17 32021914 32022221 -53416259 - AluSg1 SINE Alu -2 307 2 262 119 0 0 chr17 32023387 32023429 -53415051 + U5 snRNA snRNA 1 42 -74 1937 151 3 0 chr17 32025078 32025376 -53413104 - AluSx SINE Alu -13 299 1 2023 141 0 7 chr17 32025459 32025750 -53412730 - AluSx SINE Alu -23 289 1 2514 71 3 0 chr17 32025893 32026202 -53412278 - AluSp SINE Alu -1 312 3 378 169 0 36 chr17 32026318 32026401 -53412079 + MER116 DNA Mariner 1 80 0 22 0 0 0 chr17 32026774 32026796 -53411684 + AT_rich Low_complexity Low_complexity 1 22 0 1991 156 22 22 chr17 32027764 32028130 -53410350 + MER47A DNA MER2_type 1 366 0 641 246 0 0 chr17 32028164 32028290 -53410190 + FLAM_C SINE Alu 1 126 -17 338 297 128 65 chr17 32028606 32028671 -53409809 + L1MEd LINE L1 18 77 -6042 372 104 0 0 chr17 32028671 32028738 -53409742 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 338 297 128 65 chr17 32028738 32029039 -53409441 + L1MEd LINE L1 77 407 -5712 243 261 138 15 chr17 32029251 32029446 -53409034 + L1MEd LINE L1 730 948 -5171 1734 137 0 0 chr17 32029449 32029690 -53408790 + AluSg/x SINE Alu 71 311 -1 630 175 0 0 chr17 32029755 32029852 -53408628 + FRAM SINE Alu 41 137 -39 554 235 55 51 chr17 32029973 32030352 -53408128 + MLT1H LTR MaLR 206 549 0 2244 116 0 0 chr17 32031006 32031308 -53407172 - AluSx SINE Alu -10 302 1 219 69 0 0 chr17 32031705 32031734 -53406746 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 469 287 53 62 chr17 32031780 32032121 -53406359 + MLT1H-int LTR MaLR 1033 1370 -1 1438 209 100 60 chr17 32032124 32032636 -53405844 + MLT1H LTR MaLR 3 534 -15 507 270 58 109 chr17 32032644 32033129 -53405351 + L1MEd LINE L1 1056 1556 -4614 1991 169 0 0 chr17 32034410 32034717 -53403763 + AluJb SINE Alu 1 307 -5 233 188 29 58 chr17 32034718 32034787 -53403693 - MLT1J LTR MaLR -50 461 395 993 220 0 0 chr17 32034805 32034991 -53403489 + MER58A DNA MER1_type 39 224 0 609 307 49 22 chr17 32035035 32035302 -53403178 - MLT1J LTR MaLR -237 274 1 335 235 39 89 chr17 32036493 32036672 -53401808 - MLT1J LTR MaLR 0 511 342 252 86 0 0 chr17 32036672 32036707 -53401773 + (TTTTC)n Simple_repeat Simple_repeat 4 38 0 2334 112 0 13 chr17 32036836 32037149 -53401331 + AluSx SINE Alu 1 309 -3 306 0 0 0 chr17 32037149 32037183 -53401297 + (TA)n Simple_repeat Simple_repeat 2 35 0 2263 106 0 7 chr17 32037251 32037552 -53400928 + AluSx SINE Alu 1 299 -13 474 124 56 0 chr17 32040099 32040188 -53398292 - L1MA8 LINE L1 -127 6164 6071 23 0 0 0 chr17 32040196 32040219 -53398261 + AT_rich Low_complexity Low_complexity 1 23 0 22 43 0 21 chr17 32040685 32040701 -53397779 + AT_rich Low_complexity Low_complexity 1 16 -30 1598 172 56 0 chr17 32040701 32040968 -53397512 - AluJo SINE Alu -30 282 1 22 43 0 21 chr17 32040968 32040998 -53397482 + AT_rich Low_complexity Low_complexity 16 46 0 616 300 39 39 chr17 32041180 32041388 -53397092 + MER102b DNA MER1_type 2 213 -1215 2174 107 0 0 chr17 32041388 32041704 -53396776 + AluSq SINE Alu 3 318 0 616 300 39 39 chr17 32041704 32041824 -53396656 + MER102b DNA MER1_type 212 331 -10 307 189 278 0 chr17 32042160 32042250 -53396230 + L2 LINE L2 3195 3309 -4 1342 97 0 38 chr17 32042314 32042500 -53395980 - AluSg/x SINE Alu -12 300 122 1124 115 6 0 chr17 32042575 32042731 -53395749 - AluSq SINE Alu -156 157 1 565 273 90 100 chr17 32042736 32043036 -53395444 - L2 LINE L2 0 3272 2976 303 187 53 0 chr17 32043607 32043682 -53394798 + L1ME2 LINE L1 6085 6166 0 2457 70 0 13 chr17 32044010 32044323 -53394157 - AluY SINE Alu -2 309 1 2414 77 0 6 chr17 32046378 32046689 -53391791 - AluY SINE Alu -2 309 1 2199 108 0 0 chr17 32046787 32047075 -53391405 - AluSc SINE Alu -21 288 1 249 284 91 51 chr17 32047081 32047274 -53391206 - L1MC4a LINE L1 -1639 6169 5958 2333 121 8 30 chr17 32047274 32047646 -53390834 - THE1B LTR MaLR 0 364 1 249 284 91 51 chr17 32047646 32047748 -53390732 - L1MC4a LINE L1 -1850 5958 5862 4176 168 14 1 chr17 32047802 32048584 -53389896 + L1MB2 LINE L1 5380 6171 0 257 228 0 0 chr17 32048636 32048693 -53389787 - L1MC4a LINE L1 -2059 5749 5693 2181 115 3 0 chr17 32049765 32050061 -53388419 + AluSp SINE Alu 1 297 -16 286 184 58 46 chr17 32050088 32050175 -53388305 + MIR SINE MIR 173 260 -2 332 307 118 0 chr17 32050220 32050347 -53388133 - L1MC/D LINE L1 -1988 5820 5679 1536 175 6 60 chr17 32050699 32051014 -53387466 + AluJo SINE Alu 1 298 -14 564 326 72 48 chr17 32051258 32051884 -53386596 - L2 LINE L2 -183 3089 2439 2067 126 0 17 chr17 32053051 32053353 -53385127 - AluSg SINE Alu -13 297 1 768 161 0 8 chr17 32053432 32053556 -53384924 + AluJo SINE Alu 13 135 -177 986 208 127 9 chr17 32053597 32053809 -53384671 - MER8 DNA MER2_type -1 238 2 2078 93 11 0 chr17 32054397 32054677 -53383803 - AluSc SINE Alu -26 283 1 207 0 0 0 chr17 32054678 32054701 -53383779 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1722 171 0 11 chr17 32054701 32054988 -53383492 - AluJo SINE Alu -28 284 1 21 0 0 0 chr17 32055700 32055721 -53382759 + AT_rich Low_complexity Low_complexity 1 21 0 1874 159 0 7 chr17 32055721 32056011 -53382469 - AluJb SINE Alu -24 288 1 258 125 0 0 chr17 32056141 32056189 -53382291 - MADE1 DNA Mariner 0 80 33 264 30 0 0 chr17 32056204 32056237 -53382243 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1767 180 0 7 chr17 32056239 32056523 -53381957 - AluJb SINE Alu -30 282 1 2636 269 61 45 chr17 32057628 32058305 -53380175 + L1ME3A LINE L1 3712 4377 -1793 1796 181 3 7 chr17 32058305 32058592 -53379888 + AluJo SINE Alu 1 286 -26 2636 269 61 45 chr17 32058592 32059394 -53379086 + L1ME3A LINE L1 4377 5165 -1005 1727 152 4 4 chr17 32059394 32059664 -53378816 + AluJo SINE Alu 21 290 -22 2636 269 61 45 chr17 32059664 32060352 -53378128 + L1ME3A LINE L1 5165 5956 -214 2053 145 0 19 chr17 32060574 32060892 -53377588 - AluSx SINE Alu 0 312 1 221 226 38 19 chr17 32061854 32061907 -53376573 - L3 LINE CR1 -1 1576 1523 598 227 0 111 chr17 32062019 32062191 -53376289 - MIR3 SINE MIR -55 153 1 308 75 0 38 chr17 32064517 32064570 -53373910 + (GGA)n Simple_repeat Simple_repeat 1 51 0 215 139 28 0 chr17 32064913 32064949 -53373531 + CT-rich Low_complexity Low_complexity 1 37 0 739 163 0 57 chr17 32066202 32066343 -53372137 - FLAM_C SINE Alu 0 133 1 2275 91 3 0 chr17 32066999 32067328 -53371152 - AluSp SINE Alu 0 330 1 2072 95 33 0 chr17 32067335 32067648 -53370832 - AluSp SINE Alu 0 322 1 2320 64 0 0 chr17 32067834 32068141 -53370339 + AluY SINE Alu 2 308 0 2446 47 0 3 chr17 32068277 32068574 -53369906 - AluY SINE Alu -15 296 1 198 0 0 0 chr17 32069205 32069227 -53369253 + (A)n Simple_repeat Simple_repeat 1 22 0 2528 31 27 0 chr17 32069555 32069847 -53368633 - AluY SINE Alu -11 300 1 908 143 0 0 chr17 32069871 32070004 -53368476 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr17 32070464 32070485 -53367995 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr17 32072443 32072469 -53366011 + (TA)n Simple_repeat Simple_repeat 1 26 0 2228 116 0 7 chr17 32073213 32073514 -53364966 - AluSx SINE Alu -11 301 3 584 159 44 9 chr17 32073606 32073719 -53364761 - MIR SINE MIR -41 221 105 521 252 189 9 chr17 32074386 32074569 -53363911 - MIR SINE MIR -44 218 3 33 0 0 0 chr17 32074944 32074977 -53363503 + AT_rich Low_complexity Low_complexity 1 33 0 186 133 0 0 chr17 32077444 32077474 -53361006 + (TTA)n Simple_repeat Simple_repeat 2 31 0 206 141 76 22 chr17 32077696 32077788 -53360692 + (TA)n Simple_repeat Simple_repeat 2 98 0 1237 219 131 88 chr17 32077836 32078540 -53359940 - MER21B LTR ERV1 -124 739 6 231 345 86 29 chr17 32078781 32078920 -53359560 - MER5B DNA MER1_type -30 148 2 1235 179 77 3 chr17 32078930 32079227 -53359253 - MER33 DNA MER1_type 0 324 6 478 218 148 0 chr17 32079540 32079641 -53358839 - FLAM_A SINE Alu -16 117 2 2410 77 0 0 chr17 32079678 32079978 -53358502 - AluY SINE Alu 0 311 12 2150 115 10 0 chr17 32080157 32080461 -53358019 - AluSp SINE Alu -6 307 1 234 62 0 0 chr17 32080579 32080611 -53357869 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 225 0 0 0 chr17 32081232 32081257 -53357223 + (CA)n Simple_repeat Simple_repeat 2 26 0 301 115 16 16 chr17 32081257 32081318 -53357162 + (TG)n Simple_repeat Simple_repeat 2 62 0 1698 176 40 17 chr17 32084069 32084253 -53354227 - AluJb SINE Alu -3 309 114 309 51 0 0 chr17 32084253 32084292 -53354188 + (TG)n Simple_repeat Simple_repeat 2 40 0 1698 176 40 17 chr17 32084292 32084409 -53354071 - AluJb SINE Alu -198 114 1 839 153 0 44 chr17 32084653 32084790 -53353690 + FLAM_C SINE Alu 1 131 -2 225 0 0 0 chr17 32086667 32086692 -53351788 + (T)n Simple_repeat Simple_repeat 1 25 0 206 180 40 20 chr17 32092788 32092838 -53345642 + L2 LINE L2 3020 3070 -243 316 323 44 38 chr17 32092930 32093088 -53345392 - MIR SINE MIR -71 191 33 189 385 0 13 chr17 32093124 32093202 -53345278 - L2 LINE L2 -88 3184 3108 2770 249 178 52 chr17 32093539 32094789 -53343691 + L2 LINE L2 695 2102 -1212 244 204 0 0 chr17 32094796 32094850 -53343630 + L1ME1 LINE L1 6019 6072 -94 234 222 0 0 chr17 32096788 32096842 -53341638 + A-rich Low_complexity Low_complexity 1 54 0 1725 187 3 7 chr17 32098209 32098509 -53339971 + AluJo SINE Alu 1 299 -13 1223 209 61 36 chr17 32098511 32098870 -53339610 + L1ME2 LINE L1 5788 6155 -9 1636 169 0 60 chr17 32098880 32099194 -53339286 - AluJo SINE Alu -17 295 1 2220 112 0 0 chr17 32099216 32099512 -53338968 - AluSx SINE Alu -16 296 1 2324 81 3 0 chr17 32100016 32100330 -53338150 - AluSp SINE Alu 0 315 1 2257 84 7 7 chr17 32100532 32100830 -53337650 + AluSg SINE Alu 1 298 -12 234 313 0 61 chr17 32100886 32100985 -53337495 - MIR SINE MIR -58 150 58 228 67 0 0 chr17 32101064 32101094 -53337386 + (TA)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr17 32101774 32101796 -53336684 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 32101840 32101861 -53336619 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 32101936 32101964 -53336516 + AT_rich Low_complexity Low_complexity 1 28 0 1872 151 31 7 chr17 32102315 32102606 -53335874 - AluSx SINE Alu -14 298 1 646 125 0 45 chr17 32103768 32103880 -53334600 + FLAM_C SINE Alu 23 129 -14 2385 106 0 0 chr17 32104561 32104873 -53333607 - AluSx SINE Alu 0 312 1 232 306 229 6 chr17 32109311 32109468 -53329012 + MIR SINE MIR 21 212 -50 21 36 0 0 chr17 32111181 32111209 -53327271 + AT_rich Low_complexity Low_complexity 1 28 0 2207 121 7 3 chr17 32113377 32113684 -53324796 - AluSx SINE Alu -4 308 1 907 128 0 15 chr17 32113804 32113937 -53324543 - FLAM_C SINE Alu 0 133 3 1615 69 178 32 chr17 32117542 32117789 -53320691 - AluY SINE Alu -18 283 1 971 192 43 32 chr17 32117821 32118083 -53320397 - L1ME LINE L1 -399 5755 5501 32 43 0 0 chr17 32118968 32119014 -53319466 + AT_rich Low_complexity Low_complexity 1 46 0 2576 64 0 3 chr17 32119408 32119719 -53318761 - AluY SINE Alu -1 310 1 24 67 0 0 chr17 32121116 32121161 -53317319 + AT_rich Low_complexity Low_complexity 1 45 0 331 110 14 55 chr17 32122203 32122276 -53316204 + L1MC5 LINE L1 7634 7703 -258 482 200 166 11 chr17 32122329 32122504 -53315976 + L1MC5 LINE L1 7709 7910 -51 1731 176 30 3 chr17 32122509 32122810 -53315670 - AluJb SINE Alu -3 309 1 261 0 0 0 chr17 32124034 32124063 -53314417 + (CA)n Simple_repeat Simple_repeat 1 29 0 2524 74 0 0 chr17 32126502 32126811 -53311669 + AluSc SINE Alu 1 309 0 1797 131 0 67 chr17 32127172 32127323 -53311157 + AluSx SINE Alu 1 122 -190 387 0 0 0 chr17 32127323 32127366 -53311114 + (TA)n Simple_repeat Simple_repeat 2 44 0 1797 131 0 67 chr17 32127366 32127528 -53310952 + AluSx SINE Alu 122 293 -19 27 29 0 0 chr17 32127718 32127752 -53310728 + AT_rich Low_complexity Low_complexity 1 34 0 198 281 158 0 chr17 32130008 32130090 -53308390 + MIR3 SINE MIR 110 204 -4 21 0 0 0 chr17 32132929 32132950 -53305530 + AT_rich Low_complexity Low_complexity 1 21 0 669 238 71 12 chr17 32133106 32133274 -53305206 - MIR SINE MIR -12 250 73 780 182 10 48 chr17 32133471 32133680 -53304800 - L1MD3 LINE L1 -24 7971 7771 2031 106 4 0 chr17 32133732 32133997 -53304483 + AluSx SINE Alu 1 266 -46 545 149 0 0 chr17 32133997 32134084 -53304396 + AluSg/x SINE Alu 219 305 -7 1889 94 0 65 chr17 32134122 32134398 -53304082 + AluSg SINE Alu 33 290 -20 263 183 150 17 chr17 32134425 32134485 -53303995 + MIR SINE MIR 93 160 -102 655 273 150 5 chr17 32134492 32134712 -53303768 - MIR SINE MIR 0 262 11 238 222 37 0 chr17 32134723 32134777 -53303703 + MIR SINE MIR 206 261 -1 2000 129 3 35 chr17 32134912 32135230 -53303250 + AluJb SINE Alu 1 308 -4 2080 139 0 7 chr17 32135374 32135676 -53302804 + AluJo SINE Alu 1 300 -12 479 300 0 50 chr17 32135892 32136032 -53302448 - MIR SINE MIR -108 154 22 1096 159 22 22 chr17 32137998 32138225 -53300255 - MSTB LTR MaLR 0 426 200 288 0 0 0 chr17 32138258 32138290 -53300190 + (T)n Simple_repeat Simple_repeat 1 32 0 947 114 126 0 chr17 32138906 32139081 -53299399 - MSTB LTR MaLR -229 197 1 21 36 0 0 chr17 32139813 32139841 -53298639 + AT_rich Low_complexity Low_complexity 1 28 0 4808 236 154 42 chr17 32140009 32141695 -53296785 + L2 LINE L2 258 2132 -1182 679 185 0 8 chr17 32141695 32141825 -53296655 + L1ME1 LINE L1 6033 6161 -5 527 158 53 9 chr17 32141865 32141979 -53296501 + L1MB7 LINE L1 6023 6141 -43 1642 131 39 11 chr17 32141990 32142250 -53296230 + AluSx SINE Alu 25 291 -21 1837 178 0 7 chr17 32142288 32142591 -53295889 - AluJo SINE Alu -11 301 1 21 0 0 0 chr17 32142593 32142614 -53295866 + AT_rich Low_complexity Low_complexity 1 21 0 253 253 36 12 chr17 32142761 32142844 -53295636 + L2 LINE L2 2123 2207 -1107 2156 256 70 58 chr17 32142999 32143458 -53295022 + L2 LINE L2 2230 2682 -631 2100 128 3 22 chr17 32143458 32143770 -53294710 + AluSx SINE Alu 1 306 -6 2156 256 70 58 chr17 32143770 32144371 -53294109 + L2 LINE L2 2682 3307 -6 2549 68 0 0 chr17 32144937 32145247 -53293233 + AluY SINE Alu 1 310 -1 232 304 18 0 chr17 32145725 32145781 -53292699 + MIR SINE MIR 39 95 -167 310 233 135 43 chr17 32145806 32145969 -53292511 - L1ME4a LINE L1 -21 6100 5923 24 0 0 0 chr17 32146073 32146097 -53292383 + AT_rich Low_complexity Low_complexity 1 24 0 360 249 163 58 chr17 32146194 32146451 -53292029 - L1ME4a LINE L1 -454 5667 5384 2238 109 0 3 chr17 32146493 32146795 -53291685 + AluSx SINE Alu 1 301 -11 1469 231 3 3 chr17 32146972 32147266 -53291214 - AluJo SINE Alu -18 294 1 383 260 31 52 chr17 32147279 32147471 -53291009 - L1ME4a LINE L1 -1519 4627 4440 2083 203 118 20 chr17 32147471 32147978 -53290502 - MER119 DNA MER1_type 0 583 27 207 241 56 0 chr17 32149076 32149130 -53289350 - MIR SINE MIR -74 188 132 1170 30 0 7 chr17 32149196 32149331 -53289149 + AluSc SINE Alu 1 134 -175 2354 61 7 0 chr17 32149331 32149626 -53288854 + AluY SINE Alu 1 297 -14 2397 100 0 0 chr17 32150210 32150519 -53287961 - AluSc SINE Alu 0 309 1 1747 162 3 48 chr17 32150523 32150738 -53287742 - AluJo SINE Alu -17 295 97 2210 119 0 0 chr17 32150738 32151032 -53287448 - AluSx SINE Alu -18 294 1 1747 162 3 48 chr17 32151032 32151125 -53287355 - AluJo SINE Alu -215 97 1 215 59 0 29 chr17 32151594 32151628 -53286852 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 406 287 28 0 chr17 32151628 32151736 -53286744 - L2 LINE L2 -14 3299 3189 397 261 46 8 chr17 32152302 32152432 -53286048 + MIR SINE MIR 80 214 -48 637 188 9 0 chr17 32152441 32152553 -53285927 + FLAM_A SINE Alu 16 128 -14 210 132 57 0 chr17 32154547 32154600 -53283880 + CT-rich Low_complexity Low_complexity 2 57 0 193 179 0 30 chr17 32157530 32157597 -53280883 + GA-rich Low_complexity Low_complexity 1 65 0 24 53 0 0 chr17 32158047 32158085 -53280395 + AT_rich Low_complexity Low_complexity 1 38 0 893 253 0 15 chr17 32158088 32158286 -53280194 + MIR SINE MIR 17 211 -51 213 65 0 0 chr17 32159267 32159298 -53279182 + (A)n Simple_repeat Simple_repeat 1 31 0 2248 109 3 0 chr17 32159301 32159603 -53278877 + AluSq SINE Alu 1 303 -10 255 313 84 0 chr17 32159620 32159703 -53278777 + MIR SINE MIR 65 154 -108 709 148 47 54 chr17 32159734 32159883 -53278597 + AluJo SINE Alu 6 153 -159 22 70 0 0 chr17 32160905 32160948 -53277532 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr17 32160989 32161011 -53277469 + AT_rich Low_complexity Low_complexity 1 22 0 449 329 93 9 chr17 32161072 32161288 -53277192 - L3 LINE CR1 -2 1575 1342 1107 35 0 21 chr17 32162209 32162353 -53276127 - L1PA4 LINE L1 0 6155 6015 265 304 32 40 chr17 32164113 32164238 -53274242 - L3b LINE CR1 -136 1447 1324 237 255 0 0 chr17 32164510 32164557 -53273923 - MIR SINE MIR -147 115 69 285 284 0 0 chr17 32164757 32164852 -53273628 - AluSp/q SINE Alu 0 303 209 927 269 60 3 chr17 32164939 32165222 -53273258 - AluSc SINE Alu 0 299 1 187 267 178 0 chr17 32167290 32167391 -53271089 - L2 LINE L2 -19 3294 3176 2253 199 109 16 chr17 32167630 32167861 -53270619 + L1ME1 LINE L1 5224 5432 -902 2342 93 0 10 chr17 32167861 32168171 -53270309 - AluSc SINE Alu -2 307 1 2253 199 109 16 chr17 32168171 32168773 -53269707 + L1ME1 LINE L1 5432 6331 -3 848 159 8 0 chr17 32168785 32168917 -53269563 + FLAM_C SINE Alu 1 133 0 275 322 17 9 chr17 32169783 32169898 -53268582 + CT-rich Low_complexity Low_complexity 1 116 0 25 0 0 0 chr17 32172290 32172315 -53266165 + AT_rich Low_complexity Low_complexity 1 25 0 35 24 0 0 chr17 32173966 32174008 -53264472 + AT_rich Low_complexity Low_complexity 1 42 0 35 24 0 0 chr17 32174052 32174094 -53264386 + AT_rich Low_complexity Low_complexity 1 42 0 717 94 0 9 chr17 32174134 32174240 -53264240 - AluSp/q SINE Alu 0 313 209 2304 78 55 0 chr17 32174317 32174610 -53263870 - AluSc SINE Alu 0 309 1 706 141 50 0 chr17 32180050 32180171 -53258309 - AluJb SINE Alu -22 290 164 2139 114 10 3 chr17 32181624 32181921 -53256559 + AluSq SINE Alu 1 299 -14 2453 87 3 3 chr17 32181996 32182307 -53256173 + AluSx SINE Alu 1 311 -1 369 0 0 0 chr17 32182546 32182587 -53255893 + (TG)n Simple_repeat Simple_repeat 2 42 0 517 256 30 32 chr17 32183308 32183541 -53254939 - MIR SINE MIR 0 262 32 1018 184 41 0 chr17 32183735 32183931 -53254549 - L1MB4 LINE L1 0 6180 5977 21 36 0 0 chr17 32184782 32184810 -53253670 + AT_rich Low_complexity Low_complexity 1 28 0 1728 152 16 55 chr17 32185889 32186198 -53252282 + AluJb SINE Alu 1 297 -15 207 229 165 46 chr17 32186275 32186384 -53252096 + MIR SINE MIR 117 238 -24 1480 204 41 3 chr17 32187622 32187916 -53250564 - AluJo SINE Alu -7 305 1 1378 153 22 0 chr17 32187963 32188186 -53250294 - AluJo SINE Alu 0 312 85 307 247 35 0 chr17 32188334 32188419 -53250061 - L2 LINE L2 0 3313 3226 552 205 102 98 chr17 32189649 32189864 -53248616 + MIR SINE MIR 26 241 -21 321 26 0 0 chr17 32190088 32190126 -53248354 + (TAGA)n Simple_repeat Simple_repeat 2 39 0 234 222 0 0 chr17 32192052 32192106 -53246374 + T-rich Low_complexity Low_complexity 1 54 0 211 297 99 22 chr17 32192723 32192814 -53245666 + MIR SINE MIR 95 192 -70 194 311 126 8 chr17 32193124 32193243 -53245237 - MIR3 SINE MIR -63 145 13 2387 81 3 0 chr17 32193490 32193785 -53244695 + AluSp SINE Alu 3 298 -15 2420 100 3 0 chr17 32196283 32196592 -53241888 - AluSp SINE Alu -2 311 2 1157 110 0 0 chr17 32196683 32196837 -53241643 - AluSg/x SINE Alu -14 296 143 1533 179 16 26 chr17 32197209 32197516 -53240964 - AluJb SINE Alu -8 304 1 591 235 221 5 chr17 32197632 32197836 -53240644 + MIR SINE MIR 15 262 0 1246 92 179 5 chr17 32197958 32198154 -53240326 - MER30 DNA MER1_type 0 230 1 1486 140 23 45 chr17 32198155 32198420 -53240060 - AluJo SINE Alu -52 260 2 303 49 0 0 chr17 32198424 32198465 -53240015 + (TG)n Simple_repeat Simple_repeat 2 42 0 412 200 0 0 chr17 32198465 32198535 -53239945 - FLAM SINE Alu -16 117 48 24 32 0 0 chr17 32199076 32199107 -53239373 + AT_rich Low_complexity Low_complexity 1 31 0 339 234 35 113 chr17 32199600 32199674 -53238806 + MIR SINE MIR 14 73 -189 2281 106 10 0 chr17 32199674 32199976 -53238504 + AluSx SINE Alu 1 305 -7 339 234 35 113 chr17 32199976 32200042 -53238438 + MIR SINE MIR 73 143 -119 888 218 63 0 chr17 32200591 32200797 -53237683 + MIR SINE MIR 11 229 -33 4017 205 67 58 chr17 32200873 32201070 -53237410 - L1MC4 LINE L1 -5 8037 7843 2000 141 41 0 chr17 32201070 32201361 -53237119 - AluSx SINE Alu -9 303 1 4017 205 67 58 chr17 32201361 32202396 -53236084 - L1MC4 LINE L1 -199 7843 6794 247 253 0 79 chr17 32202459 32202649 -53235831 + CT-rich Low_complexity Low_complexity 1 175 0 429 356 7 0 chr17 32205393 32205528 -53232952 - L2 LINE L2 0 3272 3137 471 283 110 32 chr17 32205732 32206040 -53232440 - L2 LINE L2 -340 2974 2643 362 177 94 0 chr17 32206330 32206426 -53232054 + Charlie7 DNA MER1_type 51 155 -2457 364 253 148 44 chr17 32208245 32208378 -53230102 + MIR SINE MIR 56 214 -48 1890 170 0 0 chr17 32208378 32208672 -53229808 + AluJo SINE Alu 1 294 -18 364 253 148 44 chr17 32208672 32208720 -53229760 + MIR SINE MIR 214 256 -6 1454 160 73 24 chr17 32209882 32210170 -53228310 - AluJb SINE Alu -10 302 1 1784 177 14 0 chr17 32210300 32210594 -53227886 + AluJo SINE Alu 1 298 -14 743 206 37 102 chr17 32213672 32213997 -53224483 - L1MC4 LINE L1 -2 8040 7737 837 231 124 7 chr17 32213999 32214272 -53224208 - L1MC4 LINE L1 -503 7539 7235 1976 122 24 10 chr17 32217847 32218142 -53220338 + AluSc SINE Alu 1 299 -10 245 237 254 65 chr17 32219918 32220087 -53218393 + MIR SINE MIR 10 210 -52 263 216 0 0 chr17 32220395 32220446 -53218034 + MIR3 SINE MIR 135 185 -23 1977 107 48 0 chr17 32220992 32221283 -53217197 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr17 32221366 32221390 -53217090 + (A)n Simple_repeat Simple_repeat 1 24 0 1684 160 0 39 chr17 32221392 32221704 -53216776 + AluJb SINE Alu 1 300 -12 1905 126 8 62 chr17 32221713 32221906 -53216574 + L1MB3 LINE L1 5820 5987 -196 1726 144 0 69 chr17 32221906 32222212 -53216268 - AluJo SINE Alu -18 294 10 1905 126 8 62 chr17 32222212 32222374 -53216106 + L1MB3 LINE L1 5987 6156 -27 2009 250 76 24 chr17 32222400 32223254 -53215226 + L1ME1 LINE L1 1080 2132 -4431 1354 176 50 56 chr17 32223298 32223352 -53215128 + L1MB2 LINE L1 5254 5307 -864 2109 112 0 0 chr17 32223352 32223646 -53214834 - AluSx SINE Alu -18 294 1 1354 176 50 56 chr17 32223646 32223672 -53214808 + L1MB2 LINE L1 5307 5332 -839 1706 160 7 10 chr17 32223672 32223965 -53214515 + AluJb SINE Alu 1 292 -20 1354 176 50 56 chr17 32223965 32224240 -53214240 + L1MB2 LINE L1 5332 5608 -563 978 154 85 40 chr17 32224240 32224441 -53214039 + AluJo SINE Alu 1 210 -102 725 146 0 0 chr17 32224498 32224601 -53213879 + FRAM SINE Alu 41 143 -33 3272 126 33 28 chr17 32224601 32224958 -53213522 + L1MB2 LINE L1 5590 5953 -218 2081 116 17 0 chr17 32224958 32225260 -53213220 + AluSx SINE Alu 2 308 -4 3272 126 33 28 chr17 32225260 32225474 -53213006 + L1MB2 LINE L1 5953 6164 -7 21 0 0 0 chr17 32225489 32225510 -53212970 + AT_rich Low_complexity Low_complexity 1 21 0 1314 167 144 19 chr17 32225519 32225782 -53212698 + AluJo SINE Alu 1 296 -6 404 152 25 0 chr17 32225808 32225887 -53212593 + L1ME1 LINE L1 2364 2444 -3938 1748 147 0 43 chr17 32225891 32226217 -53212263 + AluJo SINE Alu 1 312 0 564 148 11 0 chr17 32226226 32226314 -53212166 - AluJo SINE Alu -119 193 105 833 239 31 41 chr17 32226322 32226615 -53211865 + L1ME1 LINE L1 2469 2758 -3624 4578 209 50 82 chr17 32226635 32226807 -53211673 + L1ME1 LINE L1 3295 3471 -2911 2314 94 0 0 chr17 32226807 32227116 -53211364 + AluSc SINE Alu 1 309 0 4578 209 50 82 chr17 32227116 32227382 -53211098 + L1ME1 LINE L1 3471 3744 -2638 2023 128 0 0 chr17 32227382 32227680 -53210800 + AluSx SINE Alu 1 298 -14 4578 209 50 82 chr17 32227680 32227756 -53210724 + L1ME1 LINE L1 3744 3821 -2561 2289 95 0 0 chr17 32227756 32228062 -53210418 + AluSg SINE Alu 1 306 -4 4578 209 50 82 chr17 32228062 32228234 -53210246 + L1ME1 LINE L1 3821 3997 -2385 942 214 12 0 chr17 32228234 32228402 -53210078 + FAM SINE Alu 1 170 -5 4578 209 50 82 chr17 32228402 32228436 -53210044 + L1ME1 LINE L1 3997 4031 -2351 1771 132 35 7 chr17 32228436 32228723 -53209757 - AluSx SINE Alu -12 300 6 4578 209 50 82 chr17 32228723 32228780 -53209700 + L1ME1 LINE L1 4031 4088 -2294 2424 78 12 27 chr17 32228780 32229115 -53209365 - L1PA8A LINE L1 -9 6122 5793 4578 209 50 82 chr17 32229115 32229137 -53209343 + L1ME1 LINE L1 4088 4109 -2273 1496 140 39 60 chr17 32229137 32229270 -53209210 + AluJb SINE Alu 17 151 -161 1860 151 7 3 chr17 32229270 32229574 -53208906 + AluSx SINE Alu 1 305 -7 1496 140 39 60 chr17 32229574 32229725 -53208755 + AluJb SINE Alu 151 295 -17 4578 209 50 82 chr17 32229725 32229930 -53208550 + L1ME1 LINE L1 4109 4319 -2063 1937 110 13 20 chr17 32229930 32230231 -53208249 + AluSx SINE Alu 2 300 -12 4578 209 50 82 chr17 32230231 32230850 -53207630 + L1ME1 LINE L1 4319 4873 -1509 1607 154 0 4 chr17 32230852 32231112 -53207368 + AluJo SINE Alu 1 259 -53 3275 210 87 20 chr17 32231566 32232081 -53206399 + L1ME1 LINE L1 4875 5354 -1048 2181 87 30 0 chr17 32232081 32232381 -53206099 + AluSc SINE Alu 1 309 0 3275 210 87 20 chr17 32232381 32233294 -53205186 + L1ME1 LINE L1 5354 6399 -3 1975 124 7 0 chr17 32233314 32233597 -53204883 + AluSx SINE Alu 1 285 -27 433 178 93 56 chr17 32236769 32236876 -53201604 - MER3 DNA MER1_type -98 111 1 208 188 62 0 chr17 32237408 32237456 -53201024 + L2 LINE L2 3262 3312 -1 184 261 204 23 chr17 32237524 32237612 -53200868 - MIR3 SINE MIR -21 187 84 1726 130 3 60 chr17 32238494 32238810 -53199670 - AluJo SINE Alu -14 298 1 1735 117 23 0 chr17 32238834 32239099 -53199381 + AluSx SINE Alu 42 312 0 256 244 29 107 chr17 32240127 32240332 -53198148 + L1ME LINE L1 5585 5773 -348 1952 136 3 0 chr17 32240667 32240968 -53197512 + AluJb SINE Alu 1 302 -10 2071 126 0 7 chr17 32242125 32242426 -53196054 + AluSx SINE Alu 1 299 -13 848 136 0 58 chr17 32242915 32243070 -53195410 + AluJb SINE Alu 137 282 -30 328 74 0 56 chr17 32243114 32243168 -53195312 - MER66A LTR ERV1 -141 337 287 2032 116 27 0 chr17 32243234 32243535 -53194945 - AluSx SINE Alu -3 309 1 2138 160 52 40 chr17 32243555 32243780 -53194700 - L1MA7 LINE L1 -3 6288 6067 1684 120 0 19 chr17 32243780 32244038 -53194442 + AluSq SINE Alu 1 253 -60 291 71 0 0 chr17 32244042 32244084 -53194396 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 2138 160 52 40 chr17 32244084 32244333 -53194147 - L1MA7 LINE L1 -226 6065 5803 1416 203 35 140 chr17 32244343 32244507 -53193973 + L1M1 LINE L1 5268 5448 -857 2250 103 0 0 chr17 32244507 32244817 -53193663 + AluSg SINE Alu 1 310 0 1416 203 35 140 chr17 32244817 32245224 -53193256 + L1M1 LINE L1 5448 5779 -526 2696 215 77 67 chr17 32248183 32248341 -53190139 - Charlie2 DNA MER1_type -65 2797 2642 2222 62 4 0 chr17 32248341 32248617 -53189863 - AluSc SINE Alu -21 288 12 2696 215 77 67 chr17 32248617 32249397 -53189083 - Charlie2 DNA MER1_type -220 2642 1850 537 267 144 44 chr17 32249381 32249651 -53188829 - Charlie2 DNA MER1_type -2451 331 35 * 345 102 0 0 chr17 32250480 32250539 -53187941 + (TG)n Simple_repeat Simple_repeat 2 60 0 823 146 31 0 chr17 32251146 32251276 -53187204 + AluJo SINE Alu 1 134 -178 675 305 138 16 chr17 32251956 32252333 -53186147 - L3 LINE CR1 -156 1421 999 2400 47 0 10 chr17 32252595 32252896 -53185584 - AluY SINE Alu -13 298 1 391 265 31 0 chr17 32253042 32253140 -53185340 + MIR SINE MIR 51 151 -111 2253 106 0 0 chr17 32253546 32253858 -53184622 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 32255118 32255140 -53183340 + AT_rich Low_complexity Low_complexity 1 22 0 405 58 0 0 chr17 32255434 32255486 -53182994 + (TG)n Simple_repeat Simple_repeat 2 53 0 1159 196 26 18 chr17 32257340 32257569 -53180911 + MER46A DNA MER2_type 6 236 0 2417 81 0 0 chr17 32259177 32259487 -53178993 + AluY SINE Alu 2 311 0 1847 142 0 35 chr17 32259496 32259814 -53178666 + AluJo SINE Alu 1 307 -5 322 258 131 79 chr17 32259892 32260320 -53178160 + L1ME4a LINE L1 5003 5461 -769 2193 106 3 0 chr17 32260412 32260715 -53177765 + AluSx SINE Alu 1 304 -8 315 218 248 10 chr17 32260776 32261079 -53177401 + L1ME4a LINE L1 5572 5946 -175 312 187 0 13 chr17 32261143 32261218 -53177262 + L1ME4a LINE L1 6048 6121 0 661 295 58 10 chr17 32261613 32261820 -53176660 + MIR SINE MIR 34 250 -12 22 0 0 0 chr17 32262109 32262131 -53176349 + AT_rich Low_complexity Low_complexity 1 22 0 2763 126 12 12 chr17 32264082 32264510 -53173970 - MSTA LTR MaLR 0 428 1 414 189 0 0 chr17 32264530 32264620 -53173860 - L1MA4A LINE L1 -2 6301 6212 2045 100 0 29 chr17 32264903 32265213 -53173267 + AluSc SINE Alu 1 301 -8 923 190 0 6 chr17 32266122 32266296 -53172184 + FRAM SINE Alu 1 166 -10 848 113 5 5 chr17 32266472 32266676 -53171804 + AluSx SINE Alu 2 295 -15 257 327 33 40 chr17 32266677 32266827 -53171653 - L1ME LINE L1 -527 5594 5446 1125 117 0 0 chr17 32266840 32267003 -53171477 + AluSg/x SINE Alu 140 302 -8 309 299 121 42 chr17 32267003 32267069 -53171411 - L1ME LINE L1 -682 5439 5380 2435 62 3 0 chr17 32267069 32267374 -53171106 - AluY SINE Alu -5 306 1 309 299 121 42 chr17 32267374 32267659 -53170821 - L1ME LINE L1 -741 5380 5055 589 228 114 64 chr17 32268226 32268445 -53170035 + MLT1L LTR MaLR 165 394 -221 258 260 149 0 chr17 32269297 32269451 -53169029 + L1ME LINE L1 5684 5860 -261 1904 177 87 18 chr17 32269573 32270020 -53168460 + L1MC4 LINE L1 6671 7148 -894 1975 141 26 18 chr17 32270775 32271116 -53167364 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr17 32271883 32271907 -53166573 + AT_rich Low_complexity Low_complexity 1 24 0 804 168 0 0 chr17 32272007 32272126 -53166354 + FLAM_C SINE Alu 1 119 -24 1367 127 8 99 chr17 32272217 32272351 -53166129 + AluJo SINE Alu 1 146 -166 2138 123 7 3 chr17 32272351 32272659 -53165821 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 32272659 32272670 -53165810 + AluJo SINE Alu 146 156 -156 2259 112 0 13 chr17 32272670 32272983 -53165497 + AluSx SINE Alu 1 309 -3 1367 127 8 99 chr17 32272983 32273089 -53165391 + AluJo SINE Alu 156 230 -82 322 140 0 18 chr17 32273094 32273151 -53165329 - AluJ/FRAM SINE Alu -27 275 220 1767 178 7 0 chr17 32273411 32273714 -53164766 - AluJb SINE Alu -7 305 1 1785 149 3 70 chr17 32273773 32274088 -53164392 - AluJb SINE Alu -18 294 1 231 310 81 0 chr17 32274095 32274182 -53164298 - L1MC/D LINE L1 -2165 5643 5550 22 56 0 0 chr17 32274190 32274226 -53164254 + AT_rich Low_complexity Low_complexity 1 36 0 1207 192 48 16 chr17 32274379 32274692 -53163788 + MER33 DNA MER1_type 2 324 0 328 271 71 0 chr17 32275459 32275544 -53162936 + MIR SINE MIR 13 103 -159 * 898 249 28 23 chr17 32275517 32275734 -53162746 - MIR SINE MIR -25 237 20 2042 187 56 6 chr17 32275957 32276454 -53162026 - L1MC4a LINE L1 -228 7580 7059 2205 119 0 0 chr17 32277248 32277541 -53160939 - AluSx SINE Alu -19 293 1 245 288 34 0 chr17 32277753 32277812 -53160668 + MIR SINE MIR 13 73 -189 1594 161 37 68 chr17 32278074 32278428 -53160052 - MER2 DNA MER2_type -1 343 1 503 314 147 5 chr17 32278952 32279156 -53159324 - MIR SINE MIR -10 252 20 1006 219 32 16 chr17 32279420 32279667 -53158813 - MIR SINE MIR 0 262 12 372 341 46 17 chr17 32279818 32279991 -53158489 + L3b LINE CR1 1359 1536 -47 333 0 0 0 chr17 32280095 32280132 -53158348 + (CA)n Simple_repeat Simple_repeat 1 37 0 33 60 0 24 chr17 32280393 32280421 -53158059 + AT_rich Low_complexity Low_complexity 1 28 -53 1547 6 0 0 chr17 32280421 32280590 -53157890 - AluY SINE Alu -10 301 133 2218 126 0 0 chr17 32280590 32280899 -53157581 - AluSx SINE Alu -3 309 1 33 60 0 24 chr17 32280899 32280952 -53157528 + AT_rich Low_complexity Low_complexity 26 81 0 521 177 50 96 chr17 32281844 32282064 -53156416 - L1MC5 LINE L1 -212 7749 7540 21 36 0 0 chr17 32282438 32282466 -53156014 + AT_rich Low_complexity Low_complexity 1 28 0 287 239 128 0 chr17 32285950 32286059 -53152421 + HAL1 LINE L1 7 129 -2378 282 299 112 72 chr17 32286251 32286529 -53151951 + HAL1 LINE L1 387 675 -1832 1213 193 13 81 chr17 32286570 32286953 -53151527 + MLT1A1 LTR MaLR 1 357 -8 774 223 156 80 chr17 32287048 32287697 -53150783 + HAL1 LINE L1 765 1484 -1023 421 220 127 17 chr17 32287697 32287815 -53150665 - MER94 DNA DNA -3 131 1 774 223 156 80 chr17 32287815 32287942 -53150538 + HAL1 LINE L1 1484 1600 -907 471 127 28 0 chr17 32287942 32288052 -53150428 - AluSg/x SINE Alu 0 318 207 455 247 151 27 chr17 32288078 32288503 -53149977 + HAL1 LINE L1 1618 2118 -389 2001 165 80 8 chr17 32288503 32288904 -53149576 + MSTB1 LTR MaLR 3 432 0 455 247 151 27 chr17 32288904 32288947 -53149533 + HAL1 LINE L1 2118 2154 -353 2459 132 68 15 chr17 32288952 32289527 -53148953 - L1M4 LINE L1 -705 5469 4856 2001 110 24 10 chr17 32289893 32290185 -53148295 + AluSx SINE Alu 1 296 -16 257 307 83 51 chr17 32290344 32290598 -53147882 + L2 LINE L2 1807 2068 -1246 293 212 222 48 chr17 32290652 32290841 -53147639 + L2 LINE L2 2380 2601 -713 2214 96 0 13 chr17 32290856 32291157 -53147323 - AluSx SINE Alu -15 297 1 185 319 97 65 chr17 32291337 32291720 -53146760 + L2 LINE L2 2815 3209 -63 931 46 0 0 chr17 32291781 32291889 -53146591 - AluY SINE Alu -23 288 181 384 145 0 0 chr17 32291989 32292051 -53146429 + Alu SINE Alu 236 297 -5 2144 100 0 0 chr17 32292625 32292905 -53145575 - AluSg SINE Alu -30 280 1 225 0 0 0 chr17 32293515 32293540 -53144940 + (A)n Simple_repeat Simple_repeat 1 25 0 475 115 23 46 chr17 32293540 32293627 -53144853 + L2 LINE L2 1881 1965 -1349 5214 184 28 40 chr17 32293627 32294329 -53144151 - L1M4 LINE L1 -1078 5068 4359 2219 74 13 33 chr17 32294329 32294628 -53143852 - AluY SINE Alu -18 293 1 5214 184 28 40 chr17 32294628 32294792 -53143688 - L1M4 LINE L1 -1787 4359 4195 2193 106 3 3 chr17 32294792 32295094 -53143386 - AluSx SINE Alu -10 302 1 5214 184 28 40 chr17 32295094 32295539 -53142941 - L1M4 LINE L1 -1951 4195 3772 226 152 22 22 chr17 32295540 32295586 -53142894 + CT-rich Low_complexity Low_complexity 3 48 0 293 115 0 0 chr17 32295688 32295740 -53142740 + AluSc SINE Alu 248 299 0 810 254 33 39 chr17 32295757 32296015 -53142465 + L1M4 LINE L1 3243 3500 -2646 2133 130 0 0 chr17 32296015 32296314 -53142166 + AluSx SINE Alu 1 299 -13 810 254 33 39 chr17 32296314 32296390 -53142090 + L1M4 LINE L1 3500 3575 -2571 2247 112 0 3 chr17 32296390 32296702 -53141778 + AluY SINE Alu 1 311 0 1958 145 0 35 chr17 32296711 32297029 -53141451 + AluJo SINE Alu 1 307 -5 2292 106 3 0 chr17 32297627 32297930 -53140550 + AluSx SINE Alu 1 304 -8 305 272 112 12 chr17 32297991 32298160 -53140320 + L1ME LINE L1 5572 5757 -364 1665 171 4 11 chr17 32298319 32298583 -53139897 + AluJb SINE Alu 7 268 -44 21 71 0 0 chr17 32298583 32298625 -53139855 + AT_rich Low_complexity Low_complexity 1 42 0 5588 116 14 1 chr17 32299470 32300396 -53138084 + L1PB1 LINE L1 5215 6150 -1 372 331 50 22 chr17 32300418 32300599 -53137881 - MIR3 SINE MIR -5 203 18 805 183 0 0 chr17 32300771 32300902 -53137578 + FLAM_C SINE Alu 3 133 0 3140 219 49 94 chr17 32301451 32301514 -53136966 - L2 LINE L2 -1 3312 3248 933 176 49 29 chr17 32301514 32301719 -53136761 - MER3 DNA MER1_type 0 209 1 3140 219 49 94 chr17 32301719 32303017 -53135463 - L2 LINE L2 -65 3248 1996 620 163 10 0 chr17 32303017 32303115 -53135365 + FRAM SINE Alu 48 146 -30 1723 174 0 4 chr17 32303200 32303476 -53135004 + AluJo SINE Alu 1 275 -37 309 109 47 0 chr17 32303482 32303546 -53134934 + GA-rich Low_complexity Low_complexity 2 68 0 1853 65 0 73 chr17 32303651 32303926 -53134554 + AluSq SINE Alu 59 313 0 1331 192 63 4 chr17 32304185 32304456 -53134024 - AluJo SINE Alu -25 287 1 620 241 126 11 chr17 32304627 32304818 -53133662 + MIR SINE MIR 36 248 -14 264 342 90 67 chr17 32305128 32305529 -53132951 + L2 LINE L2 2848 3257 -15 1469 205 0 53 chr17 32305534 32305836 -53132644 + AluJo SINE Alu 1 286 -26 2189 112 3 0 chr17 32306556 32306850 -53131630 - AluSp SINE Alu -18 295 1 1917 160 0 29 chr17 32306884 32307191 -53131289 - AluJo SINE Alu -13 299 2 674 270 9 26 chr17 32307557 32307787 -53130693 + L2 LINE L2 874 1099 -2215 1123 181 75 31 chr17 32307798 32308091 -53130389 - MER46C DNA MER2_type -25 313 8 1394 226 239 20 chr17 32308091 32308701 -53129779 + L2 LINE L2 1090 1833 -1481 2240 75 14 4 chr17 32308702 32308980 -53129500 - AluSq SINE Alu -22 291 11 1391 159 0 9 chr17 32308990 32309217 -53129263 - AluSx SINE Alu -87 225 1 2087 156 0 0 chr17 32309534 32309842 -53128638 + AluJo SINE Alu 1 308 -4 273 330 57 0 chr17 32311180 32311286 -53127194 + MIR SINE MIR 20 131 -77 204 231 0 0 chr17 32311353 32311405 -53127075 + (CATA)n Simple_repeat Simple_repeat 4 55 0 207 300 0 29 chr17 32312086 32312156 -53126324 + GA-rich Low_complexity Low_complexity 1 68 0 2499 61 0 0 chr17 32313517 32313814 -53124666 + AluY SINE Alu 1 297 -14 429 219 107 11 chr17 32314726 32314904 -53123576 + L1ME4a LINE L1 5260 5454 -2354 404 244 137 28 chr17 32314913 32315198 -53123282 + L1ME4a LINE L1 5548 5868 -268 2065 116 10 14 chr17 32317078 32317371 -53121109 - AluSx SINE Alu -20 292 1 1802 172 0 10 chr17 32318111 32318407 -53120073 + AluJo SINE Alu 1 293 -19 519 252 8 8 chr17 32318943 32319066 -53119414 + MIR SINE MIR 138 260 -2 2061 110 0 23 chr17 32319555 32319863 -53118617 + AluSg SINE Alu 1 301 -9 1208 135 0 81 chr17 32319873 32320132 -53118348 + AluJo SINE Alu 54 291 -21 1336 196 7 37 chr17 32320160 32320202 -53118278 + AluJo SINE Alu 1 43 -269 2203 107 0 0 chr17 32320202 32320502 -53117978 + AluSx SINE Alu 1 300 -12 1336 196 7 37 chr17 32320502 32320755 -53117725 + AluJo SINE Alu 43 287 -25 184 330 34 45 chr17 32320833 32321009 -53117471 + L2 LINE L2 2213 2386 -928 2134 109 0 10 chr17 32321755 32322057 -53116423 + AluSx SINE Alu 3 301 -11 1643 182 0 25 chr17 32322061 32322380 -53116100 + AluJo SINE Alu 1 311 -1 1850 134 43 0 chr17 32322417 32322722 -53115758 + L1MB3 LINE L1 5866 6183 0 1968 136 3 0 chr17 32322752 32323061 -53115419 + AluY SINE Alu 1 310 -1 195 146 0 0 chr17 32323154 32323195 -53115285 + (A)n Simple_repeat Simple_repeat 1 41 0 2317 106 33 3 chr17 32323196 32323563 -53114917 + L1MB2 LINE L1 5792 6169 -2 735 176 8 0 chr17 32323578 32323790 -53114690 + FLAM_C SINE Alu 12 224 0 1100 150 0 0 chr17 32323790 32323963 -53114517 + AluJo/FRAM SINE Alu 131 303 -9 625 171 25 25 chr17 32324656 32324813 -53113667 + L1MC5 LINE L1 7772 7986 -9 2129 121 0 13 chr17 32324926 32325240 -53113240 + AluSg SINE Alu 1 310 0 562 214 258 11 chr17 32326048 32326230 -53112250 - MIR SINE MIR -2 260 34 1840 167 3 6 chr17 32326384 32326696 -53111784 - AluSq SINE Alu -2 311 1 2290 91 0 0 chr17 32326702 32327000 -53111480 - AluSq SINE Alu -15 298 1 1809 146 0 7 chr17 32327336 32327624 -53110856 + AluJo SINE Alu 11 296 -16 22 56 0 0 chr17 32327676 32327712 -53110768 + AT_rich Low_complexity Low_complexity 1 36 0 237 359 87 10 chr17 32328144 32328247 -53110233 + L3b LINE CR1 1473 1583 0 375 135 0 0 chr17 32328314 32328366 -53110114 + Alu SINE Alu 2 53 -255 185 185 15 0 chr17 32328373 32328438 -53110042 + (TA)n Simple_repeat Simple_repeat 2 67 0 456 317 102 32 chr17 32328568 32328754 -53109726 + MIR3 SINE MIR 3 201 -7 1535 155 16 63 chr17 32329009 32329326 -53109154 + AluJo SINE Alu 1 302 -10 369 304 55 65 chr17 32330698 32330915 -53107565 + MIR SINE MIR 2 216 -46 213 288 0 0 chr17 32332283 32332342 -53106138 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 32 43 0 0 chr17 32333342 32333388 -53105092 + AT_rich Low_complexity Low_complexity 1 46 0 183 207 0 0 chr17 32334292 32334321 -53104159 + L2 LINE L2 3154 3182 -90 655 230 7 20 chr17 32334563 32334711 -53103769 - MIR SINE MIR -2 260 115 21 0 0 0 chr17 32335096 32335117 -53103363 + AT_rich Low_complexity Low_complexity 1 21 0 712 306 72 3 chr17 32335147 32335467 -53103013 + L1ME LINE L1 5482 5823 -298 274 274 53 0 chr17 32335600 32335695 -53102785 + L1MC4 LINE L1 7803 7902 -140 1360 271 65 57 chr17 32336183 32336879 -53101601 + L1ME4a LINE L1 5347 6051 -70 2150 114 7 0 chr17 32336879 32337187 -53101293 - AluSx SINE Alu -2 310 1 1360 271 65 57 chr17 32337187 32337258 -53101222 + L1ME4a LINE L1 6051 6120 -1 199 285 9 103 chr17 32337562 32337679 -53100801 + MIR SINE MIR 4 108 -100 231 114 0 0 chr17 32337833 32337868 -53100612 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3286 202 60 37 chr17 32339058 32340146 -53098334 - L1ME1 LINE L1 -148 6018 4910 1424 187 47 7 chr17 32340146 32340446 -53098034 + AluJo SINE Alu 1 312 0 3286 202 60 37 chr17 32340446 32340561 -53097919 - L1ME1 LINE L1 -1256 4910 4799 2721 194 102 14 chr17 32340664 32341319 -53097161 + L1ME1 LINE L1 5449 6161 -5 * 4604 243 148 38 chr17 32341312 32342049 -53096431 + HAL1 LINE L1 142 797 -1710 1693 174 7 26 chr17 32342049 32342359 -53096121 + AluJo SINE Alu 1 304 -8 198 0 0 0 chr17 32342366 32342388 -53096092 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 4604 243 148 38 chr17 32342388 32342408 -53096072 + HAL1 LINE L1 802 818 -1689 1635 175 27 3 chr17 32342408 32342705 -53095775 + AluJb SINE Alu 8 311 -1 4604 243 148 38 chr17 32342705 32344066 -53094414 + HAL1 LINE L1 818 2503 -4 831 94 0 17 chr17 32344076 32344193 -53094287 + AluJb SINE Alu 5 119 -193 242 239 67 112 chr17 32344341 32344412 -53094068 + HAL1 LINE L1 1033 1106 -1401 1785 159 0 10 chr17 32344412 32344707 -53093773 + AluJo SINE Alu 5 296 -16 242 239 67 112 chr17 32344707 32345053 -53093427 + HAL1 LINE L1 1106 1431 -1076 1145 165 4 30 chr17 32345053 32345283 -53093197 + AluJo SINE Alu 86 309 -3 506 204 61 66 chr17 32345285 32345399 -53093081 + HAL1 LINE L1 1425 1539 -968 2165 143 135 29 chr17 32345399 32345852 -53092628 + MLT1D LTR MaLR 3 503 -2 506 204 61 66 chr17 32345852 32345918 -53092562 + HAL1 LINE L1 1539 1604 -903 947 157 13 0 chr17 32346334 32346493 -53091987 - AluSg/x SINE Alu -9 301 141 1174 197 49 131 chr17 32346498 32346849 -53091631 + L2 LINE L2 1520 1821 -1493 820 138 0 0 chr17 32346849 32346965 -53091515 - FLAM_C SINE Alu -17 116 1 1174 197 49 131 chr17 32346965 32347101 -53091379 + L2 LINE L2 1821 1967 -1347 1985 91 29 4 chr17 32347721 32348020 -53090460 - AluSq SINE Alu 0 306 1 307 102 51 51 chr17 32348219 32348278 -53090202 + MER66A LTR ERV1 279 337 -141 350 243 64 103 chr17 32348735 32348885 -53089595 + L1ME LINE L1 5457 5601 -520 2067 113 0 7 chr17 32348885 32349185 -53089295 + AluSq SINE Alu 1 298 -15 350 243 64 103 chr17 32349185 32349228 -53089252 + L1ME LINE L1 5601 5644 -477 1588 150 51 2 chr17 32349231 32349543 -53088937 + MER33 DNA MER1_type 1 323 -1 232 330 11 0 chr17 32349559 32349650 -53088830 + L1P4 LINE L1 5674 5765 -396 746 264 22 11 chr17 32349910 32350092 -53088388 + MIR SINE MIR 21 204 -58 21 0 0 0 chr17 32350137 32350158 -53088322 + AT_rich Low_complexity Low_complexity 1 21 0 234 167 0 0 chr17 32350209 32350245 -53088235 + L2 LINE L2 3262 3297 -16 196 258 197 15 chr17 32350782 32350848 -53087632 + MIR3 SINE MIR 103 180 -28 1540 74 5 0 chr17 32350889 32351092 -53087388 + AluSp SINE Alu 88 291 -22 400 306 150 81 chr17 32351411 32351830 -53086650 - L3 LINE CR1 -9 1568 1121 351 311 106 0 chr17 32353441 32353573 -53084907 - L2 LINE L2 -2 3270 3125 207 176 0 0 chr17 32357761 32357795 -53080685 + (TG)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr17 32358884 32358909 -53079571 + GC_rich Low_complexity Low_complexity 1 25 0 194 88 0 29 chr17 32361322 32361356 -53077124 + (TGGGGG)n Simple_repeat Simple_repeat 2 34 0 254 325 8 16 chr17 32361368 32361491 -53076989 + GA-rich Low_complexity Low_complexity 2 123 0 27 49 0 0 chr17 32364970 32365011 -53073469 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr17 32365469 32365490 -53072990 + GC_rich Low_complexity Low_complexity 1 21 0 236 164 36 18 chr17 32368926 32368981 -53069499 + G-rich Low_complexity Low_complexity 3 58 0 544 207 0 9 chr17 32372228 32372339 -53066141 + MIR3 SINE MIR 87 196 -12 21 57 0 0 chr17 32373083 32373118 -53065362 + AT_rich Low_complexity Low_complexity 1 35 0 360 133 0 0 chr17 32373651 32373711 -53064769 + (TG)n Simple_repeat Simple_repeat 2 61 0 816 140 0 22 chr17 32374214 32374350 -53064130 + FLAM_C SINE Alu 1 133 0 707 169 7 35 chr17 32374805 32374947 -53063533 + AluSg/x SINE Alu 173 310 0 295 275 83 50 chr17 32376479 32376599 -53061881 + MIR SINE MIR 18 141 -67 1715 168 91 3 chr17 32376610 32376896 -53061584 + AluSq SINE Alu 1 311 -2 833 183 6 28 chr17 32376912 32377092 -53061388 + MER5B DNA MER1_type 3 178 0 565 273 10 5 chr17 32379108 32379303 -53059177 - MIR SINE MIR -30 232 37 1771 159 50 0 chr17 32379450 32379733 -53058747 - AluJo SINE Alu -13 299 3 231 298 3 0 chr17 32379856 32379925 -53058555 + MIR SINE MIR 58 129 -79 373 295 16 38 chr17 32380908 32381091 -53057389 + GA-rich Low_complexity Low_complexity 1 179 0 411 254 35 9 chr17 32381576 32381690 -53056790 - MIR3 SINE MIR -28 180 64 495 227 46 29 chr17 32381881 32382072 -53056408 - MIR SINE MIR -51 157 19 206 157 43 14 chr17 32383176 32383246 -53055234 + GA-rich Low_complexity Low_complexity 2 73 0 21 0 0 0 chr17 32383779 32383800 -53054680 + AT_rich Low_complexity Low_complexity 1 21 0 333 155 0 0 chr17 32384319 32384377 -53054103 + (TG)n Simple_repeat Simple_repeat 1 58 0 233 321 37 0 chr17 32385113 32385194 -53053286 - MIR3 SINE MIR -7 201 118 3742 46 2 0 chr17 32385554 32386029 -53052451 - L1PA7 LINE L1 -11 6143 5668 195 42 0 0 chr17 32386262 32386286 -53052194 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 708 71 0 0 chr17 32386316 32386415 -53052065 - L1PA5 LINE L1 0 6154 6056 501 232 66 33 chr17 32386493 32386644 -53051836 - MIR SINE MIR -75 187 32 335 293 20 10 chr17 32386682 32386781 -53051699 + L2 LINE L2 3192 3291 -22 2226 102 0 10 chr17 32386800 32387094 -53051386 + AluSx SINE Alu 1 291 -21 621 168 0 0 chr17 32387239 32387346 -53051134 - FLAM_C SINE Alu -25 118 12 2374 101 0 0 chr17 32387691 32387988 -53050492 - AluSx SINE Alu -15 297 1 289 215 0 15 chr17 32388000 32388065 -53050415 - L2 LINE L2 -20 3252 3189 252 0 0 0 chr17 32389096 32389124 -53049356 + (TG)n Simple_repeat Simple_repeat 2 29 0 210 250 28 42 chr17 32389477 32389549 -53048931 + MIR SINE MIR 35 105 -157 242 359 8 17 chr17 32389647 32389764 -53048716 + L2 LINE L2 3081 3196 -76 1942 171 10 0 chr17 32389798 32390107 -53048373 + AluJo SINE Alu 1 312 0 180 200 0 0 chr17 32390199 32390239 -53048241 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 324 0 0 0 chr17 32390276 32390312 -53048168 + (CA)n Simple_repeat Simple_repeat 2 37 0 836 201 59 5 chr17 32390926 32391130 -53047350 - MIR SINE MIR -25 237 23 1602 152 13 3 chr17 32392315 32392618 -53045862 - L1MB3 LINE L1 0 6183 5878 2278 101 0 3 chr17 32392629 32392927 -53045553 - AluSg SINE Alu -13 297 1 1589 113 0 52 chr17 32393175 32393423 -53045057 - AluJb SINE Alu -14 298 64 428 200 110 17 chr17 32393432 32393568 -53044912 - MER20B DNA MER1_type -43 176 29 263 211 18 0 chr17 32393594 32393651 -53044829 + L2 LINE L2 3213 3270 -2 265 258 45 110 chr17 32394435 32394590 -53043890 + L2 LINE L2 2916 3060 -212 210 319 0 66 chr17 32394792 32394883 -53043597 + L2 LINE L2 2995 3079 -193 313 274 171 8 chr17 32395194 32395311 -53043169 + MIR3 SINE MIR 11 146 -62 2408 89 3 0 chr17 32395411 32395715 -53042765 - AluSg SINE Alu -5 305 1 571 336 213 9 chr17 32395732 32396154 -53042326 - L3 LINE CR1 -2 1575 1068 2228 123 3 3 chr17 32396178 32396478 -53042002 - AluSx SINE Alu -12 300 1 2234 118 10 0 chr17 32396534 32396838 -53041642 - AluSx SINE Alu 0 312 6 1044 257 36 121 chr17 32397040 32397150 -53041330 + L1MC4a LINE L1 5254 5372 -796 1643 173 24 30 chr17 32397150 32397445 -53041035 - AluJb SINE Alu -19 293 1 1044 257 36 121 chr17 32397445 32398048 -53040432 + L1MC4a LINE L1 5372 5537 -631 198 0 0 0 chr17 32398195 32398217 -53040263 + (TA)n Simple_repeat Simple_repeat 2 23 0 2213 114 0 3 chr17 32398217 32398514 -53039966 - AluSq SINE Alu -17 296 1 2163 124 7 3 chr17 32398561 32398859 -53039621 - AluSx SINE Alu -13 299 1 804 120 0 0 chr17 32398962 32399070 -53039410 - AluJb SINE Alu -14 298 191 449 157 0 0 chr17 32399097 32399167 -53039313 - AluJ/FLAM SINE Alu -239 73 4 213 241 0 0 chr17 32399189 32399243 -53039237 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 330 341 66 57 chr17 32399380 32399834 -53038646 + L2 LINE L2 2815 3272 0 263 303 140 11 chr17 32400149 32400327 -53038153 + MIR SINE MIR 43 243 -19 824 249 40 32 chr17 32400848 32401101 -53037379 + MIR SINE MIR 1 255 -7 439 97 43 11 chr17 32402076 32402169 -53036311 + C-rich Low_complexity Low_complexity 2 97 0 322 301 35 9 chr17 32402382 32402495 -53035985 + MER5A DNA MER1_type 44 159 -30 2095 110 36 29 chr17 32402495 32402862 -53035618 - AluSg SINE Alu 0 369 1 347 271 101 8 chr17 32402910 32403039 -53035441 + MIR SINE MIR 46 186 -76 350 231 110 0 chr17 32403645 32403736 -53034744 - MIR SINE MIR -111 151 51 2244 94 31 0 chr17 32403813 32404100 -53034380 - AluSx SINE Alu -16 296 1 21 0 0 0 chr17 32404100 32404121 -53034359 + AT_rich Low_complexity Low_complexity 1 21 0 247 182 121 0 chr17 32404172 32404238 -53034242 + MLT1K LTR MaLR 1 74 -514 242 91 0 0 chr17 32404259 32404292 -53034188 - U2 snRNA snRNA -155 33 1 558 259 100 6 chr17 32404579 32404749 -53033731 + MLT1K LTR MaLR 378 563 -25 282 292 31 46 chr17 32404906 32405036 -53033444 + MIR SINE MIR 20 147 -61 3845 136 77 8 chr17 32405036 32405697 -53032783 + MER39 LTR ERV1 1 707 0 348 183 0 0 chr17 32405905 32405998 -53032482 + (CCAA)n Simple_repeat Simple_repeat 2 94 0 235 310 50 30 chr17 32406070 32406170 -53032310 - L2 LINE L2 -229 3043 2942 211 305 29 67 chr17 32407500 32407605 -53030875 - MIR SINE MIR -72 190 90 2323 117 0 13 chr17 32407682 32407998 -53030482 + AluSx SINE Alu 1 312 0 364 220 110 0 chr17 32408114 32408205 -53030275 + MIR SINE MIR 51 151 -111 251 204 20 0 chr17 32408792 32408841 -53029639 + MIR SINE MIR 97 146 -62 185 367 145 36 chr17 32409765 32410013 -53028467 + L2 LINE L2 2966 3240 -32 222 91 0 0 chr17 32411058 32411091 -53027389 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 220 296 12 0 chr17 32411778 32411859 -53026621 + G-rich Low_complexity Low_complexity 1 82 0 25 0 0 0 chr17 32412183 32412208 -53026272 + AT_rich Low_complexity Low_complexity 1 25 0 285 274 133 0 chr17 32413329 32413442 -53025038 + MIR SINE MIR 21 148 -60 213 231 123 15 chr17 32414611 32414676 -53023804 + MIR SINE MIR 10 81 -181 1926 145 0 0 chr17 32414688 32415124 -53023356 - AluSx SINE Alu 0 470 35 316 239 112 37 chr17 32415963 32416097 -53022383 + MIR3 SINE MIR 22 165 -43 297 267 17 92 chr17 32416294 32416414 -53022066 + MIR SINE MIR 120 230 -32 260 255 69 39 chr17 32416393 32416495 -53021985 - MIR SINE MIR -81 181 77 * 278 277 108 55 chr17 32417369 32417421 -53021059 - L1MC4a LINE L1 -1635 6173 6125 2292 103 3 3 chr17 32417421 32417722 -53020758 + AluSx SINE Alu 1 301 -11 2313 109 0 0 chr17 32417724 32418026 -53020454 + AluSx SINE Alu 1 302 -10 278 277 108 55 chr17 32418026 32418277 -53020203 - L1MC4a LINE L1 -1683 6125 5851 362 255 54 47 chr17 32418360 32418509 -53019971 + MIR SINE MIR 28 177 -85 2377 95 3 0 chr17 32418539 32418834 -53019646 + AluSp SINE Alu 1 296 -17 1202 240 26 8 chr17 32419978 32420336 -53018144 - L1 LINE L1 -1734 4412 4060 533 261 0 8 chr17 32420339 32420469 -53018011 - MIR SINE MIR -114 148 20 793 291 5 5 chr17 32420850 32421049 -53017431 + MIR SINE MIR 11 209 -53 342 280 106 8 chr17 32421223 32421355 -53017125 + MIR SINE MIR 92 236 -26 217 290 237 23 chr17 32421427 32421558 -53016922 - MIR SINE MIR -91 171 13 268 234 0 13 chr17 32422091 32422168 -53016312 + (CA)n Simple_repeat Simple_repeat 2 77 0 330 269 11 29 chr17 32422240 32422415 -53016065 + (CA)n Simple_repeat Simple_repeat 2 173 0 299 303 0 43 chr17 32422656 32422844 -53015636 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 118 0 0 chr17 32422950 32422984 -53015496 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 257 268 14 0 chr17 32423338 32423409 -53015071 - MIR SINE MIR -110 152 81 455 276 66 29 chr17 32423985 32424165 -53014315 - MIR SINE MIR -70 192 9 407 233 209 12 chr17 32424298 32424461 -53014019 + MIR SINE MIR 20 214 -48 366 231 67 164 chr17 32424714 32424909 -53013571 + MER5B DNA MER1_type 1 176 -2 358 255 0 75 chr17 32424924 32424988 -53013492 + MER5A DNA MER1_type 12 79 -110 2398 84 0 0 chr17 32424988 32425297 -53013183 + AluY SINE Alu 1 309 -2 2026 99 50 0 chr17 32425301 32425584 -53012896 + AluSq SINE Alu 3 299 -14 358 255 0 75 chr17 32425584 32425620 -53012860 + MER5A DNA MER1_type 82 109 -80 212 242 30 91 chr17 32426214 32426303 -53012177 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 -78 1366 161 173 0 chr17 32426303 32426557 -53011923 - AluJo SINE Alu -4 298 1 212 242 30 91 chr17 32426557 32426632 -53011848 + (TCTCTG)n Simple_repeat Simple_repeat 78 156 0 257 50 0 25 chr17 32426647 32426687 -53011793 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 660 100 8 10 chr17 32426687 32426809 -53011671 - L1PA4 LINE L1 -24 6131 6024 243 262 262 8 chr17 32427033 32427155 -53011325 - MIR SINE MIR -79 183 31 2122 117 0 22 chr17 32427401 32427718 -53010762 - AluSx SINE Alu 0 312 3 447 361 80 24 chr17 32427864 32428350 -53010130 - L2 LINE L2 -20 3252 2739 1976 130 7 7 chr17 32428375 32428675 -53009805 + AluSx SINE Alu 1 300 -12 450 275 29 41 chr17 32428693 32428864 -53009616 - MLT1J2 LTR MaLR 0 450 282 1661 176 11 45 chr17 32428867 32429224 -53009256 - MLT1A2 LTR MaLR -1 373 29 509 323 24 0 chr17 32429327 32429494 -53008986 - MLT1J2 LTR MaLR -213 237 67 407 316 87 41 chr17 32429869 32430087 -53008393 + MIR SINE MIR 35 262 0 545 293 56 23 chr17 32430090 32430305 -53008175 + MIR SINE MIR 41 262 0 183 333 0 0 chr17 32430374 32430425 -53008055 + L2 LINE L2 3263 3313 0 564 269 98 43 chr17 32430520 32430754 -53007726 + MIR SINE MIR 2 248 -14 473 221 245 6 chr17 32431248 32431411 -53007069 - MIR SINE MIR -38 224 23 256 279 45 27 chr17 32432419 32432530 -53005950 + MIR SINE MIR 68 180 -82 411 296 25 70 chr17 32433132 32433331 -53005149 - MIR SINE MIR -71 191 2 2326 225 33 14 chr17 32433662 32434173 -53004307 - MLT1F LTR MaLR 0 542 22 373 264 70 12 chr17 32434214 32434388 -53004092 + L1ME3A LINE L1 5928 6122 -48 1981 132 20 0 chr17 32434468 32434764 -53003716 - AluSx SINE Alu -10 302 1 251 361 0 10 chr17 32434783 32434880 -53003600 - MIR SINE MIR -77 131 36 848 274 239 3 chr17 32435316 32435684 -53002796 - L2 LINE L2 -5 3308 2854 186 343 14 14 chr17 32435684 32435757 -53002723 + MIR SINE MIR 23 95 -167 1771 163 3 0 chr17 32435812 32436101 -53002379 - AluJb SINE Alu -22 290 1 1804 133 30 30 chr17 32436101 32436401 -53002079 - AluJb SINE Alu -12 300 1 376 222 12 12 chr17 32436483 32436564 -53001916 + L2 LINE L2 3186 3266 -47 398 199 189 60 chr17 32436677 32436878 -53001602 - L2 LINE L2 -213 3059 2833 592 160 8 8 chr17 32437010 32437135 -53001345 + GA-rich Low_complexity Low_complexity 1 125 0 420 139 178 30 chr17 32438092 32438193 -53000287 - FLAM_A SINE Alu -7 135 20 368 211 0 13 chr17 32438195 32438271 -53000209 + MIR SINE MIR 79 153 -55 245 275 306 16 chr17 32438601 32438794 -52999686 + MIR SINE MIR 13 261 -1 387 269 56 9 chr17 32439537 32439645 -52998835 - MIR SINE MIR -118 144 32 455 177 71 9 chr17 32439790 32439917 -52998563 - MIR SINE MIR -61 147 29 317 298 82 28 chr17 32440418 32440673 -52997807 + L2 LINE L2 2470 2738 -576 1952 154 0 6 chr17 32440685 32440997 -52997483 + AluSx SINE Alu 1 310 -2 401 274 63 89 chr17 32441010 32441393 -52997087 + L2 LINE L2 2825 3197 -75 227 145 16 65 chr17 32441991 32442053 -52996427 + C-rich Low_complexity Low_complexity 2 60 0 681 239 13 80 chr17 32442818 32443057 -52995423 - MIR SINE MIR -33 229 7 901 238 10 5 chr17 32443881 32444087 -52994393 - MIR SINE MIR -21 241 35 932 205 68 19 chr17 32444090 32444295 -52994185 - MIR SINE MIR -11 251 37 186 43 0 0 chr17 32444470 32444493 -52993987 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 240 382 26 49 chr17 32444961 32445265 -52993215 + L2 LINE L2 2564 2860 -454 351 197 0 15 chr17 32445289 32445355 -52993125 - MIR SINE MIR -1 261 197 1535 154 4 0 chr17 32445355 32445601 -52992879 - Tigger3(Golem) DNA MER2_type -1 3028 2782 2131 118 0 16 chr17 32445601 32445937 -52992543 + AluSc SINE Alu 1 309 0 186 189 0 0 chr17 32445937 32445974 -52992506 + GA-rich Low_complexity Low_complexity 1 37 0 273 281 79 12 chr17 32446005 32446169 -52992311 + L2 LINE L2 2862 3036 -236 240 204 20 0 chr17 32447063 32447132 -52991348 + C-rich Low_complexity Low_complexity 1 70 0 2458 167 42 56 chr17 32447154 32447199 -52991281 - L1MA9 LINE L1 -5 6307 6263 2153 110 10 0 chr17 32447199 32447498 -52990982 + AluSx SINE Alu 1 302 -10 2458 167 42 56 chr17 32447498 32448022 -52990458 - L1MA9 LINE L1 -49 6263 5746 208 286 0 0 chr17 32448067 32448123 -52990357 + L2 LINE L2 3217 3272 0 182 244 24 0 chr17 32448389 32448430 -52990050 - MIR SINE MIR -6 256 215 1177 35 35 11 chr17 32448595 32448769 -52989711 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6349 70 9 6 chr17 32448800 32449673 -52988807 - L1PA8A LINE L1 -2 6129 5254 309 326 136 0 chr17 32450308 32450440 -52988040 - MIR SINE MIR -82 180 31 366 298 18 9 chr17 32450732 32450846 -52987634 - MIR SINE MIR -76 132 18 1839 156 10 3 chr17 32450930 32451232 -52987248 - AluJo SINE Alu -8 304 1 1285 199 52 19 chr17 32451977 32452284 -52986196 + MER58B DNA MER1_type 1 317 -24 1071 107 13 0 chr17 32452285 32452435 -52986045 - AluSg/x SINE Alu -7 303 152 839 207 88 51 chr17 32452540 32452757 -52985723 + AluJo SINE Alu 85 309 -3 258 304 22 43 chr17 32453212 32453350 -52985130 - MER5B DNA MER1_type -35 143 9 2075 94 37 7 chr17 32453373 32453672 -52984808 + AluSx SINE Alu 1 308 -4 254 326 0 0 chr17 32455517 32455606 -52982874 + GA-rich Low_complexity Low_complexity 1 89 0 245 282 73 18 chr17 32456492 32456602 -52981878 + L2 LINE L2 2946 3061 -211 654 247 79 71 chr17 32456693 32456992 -52981488 - L2 LINE L2 -5 3308 3035 817 25 33 8 chr17 32457202 32457323 -52981157 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 865 174 14 0 chr17 32457324 32457468 -52981012 - FRAM SINE Alu -30 146 1 338 288 91 25 chr17 32457591 32457771 -52980709 - MIR SINE MIR 0 262 61 2066 100 0 30 chr17 32457771 32458072 -52980408 - AluSq SINE Alu -21 292 1 338 288 91 25 chr17 32458072 32458129 -52980351 - MIR SINE MIR -201 61 9 185 244 22 0 chr17 32459378 32459423 -52979057 + L2 LINE L2 3252 3297 -16 2342 94 0 0 chr17 32459545 32459852 -52978628 - AluSx SINE Alu -5 307 1 282 303 67 51 chr17 32459950 32460145 -52978335 - L2 LINE L2 -338 2976 2779 888 266 44 62 chr17 32460374 32460761 -52977719 - MLT1I LTR MaLR 0 409 30 613 121 0 0 chr17 32460863 32460946 -52977534 + FRAM SINE Alu 31 113 -63 2241 92 3 13 chr17 32461221 32461527 -52976953 + AluSx SINE Alu 1 303 -9 385 276 22 36 chr17 32462087 32462139 -52976341 + GA-rich Low_complexity Low_complexity 1 52 -1255 1863 127 3 54 chr17 32462139 32462267 -52976213 + AluJo SINE Alu 1 134 -168 1902 138 0 46 chr17 32462267 32462457 -52976023 - AluSx SINE Alu 0 312 115 267 103 0 0 chr17 32462457 32462496 -52975984 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2119 88 0 3 chr17 32462496 32462779 -52975701 - AluSg SINE Alu -28 282 1 1902 138 0 46 chr17 32462779 32462914 -52975566 - AluSx SINE Alu -195 117 1 1863 127 3 54 chr17 32462914 32463100 -52975380 + AluJo SINE Alu 134 299 -3 385 276 22 36 chr17 32463100 32463413 -52975067 + GA-rich Low_complexity Low_complexity 52 1307 0 405 283 29 51 chr17 32464181 32464358 -52974122 + MIR SINE MIR 32 207 -55 2190 75 3 39 chr17 32464492 32464798 -52973682 - AluSx SINE Alu -17 295 1 229 345 71 9 chr17 32464999 32465112 -52973368 + L2 LINE L2 3153 3272 0 619 260 69 76 chr17 32465317 32465394 -52973086 + L2 LINE L2 2639 2715 -598 1959 139 0 3 chr17 32465394 32465695 -52972785 + AluSx SINE Alu 1 300 -12 619 260 69 76 chr17 32465695 32466040 -52972440 + L2 LINE L2 2715 3059 -254 870 317 42 8 chr17 32466091 32466444 -52972036 - L1MEd LINE L1 -5305 814 450 2226 109 0 6 chr17 32466457 32466769 -52971711 - AluSg SINE Alu 0 310 1 2053 119 7 7 chr17 32466773 32467126 -52971354 - AluSg SINE Alu 0 310 1 603 176 29 0 chr17 32467145 32467247 -52971233 - AluJo/FRAM SINE Alu -20 292 188 625 143 0 184 chr17 32467247 32467394 -52971086 + FLAM_C SINE Alu 2 121 -22 382 247 11 0 chr17 32467420 32467513 -52970967 - AluSc SINE Alu -101 198 105 571 235 12 37 chr17 32467530 32467692 -52970788 - L1MEd LINE L1 -5959 160 3 646 264 56 15 chr17 32467716 32467913 -52970567 + L2 LINE L2 3108 3312 -1 538 241 170 31 chr17 32467892 32468116 -52970364 + MIR SINE MIR 7 261 -1 * 472 197 103 54 chr17 32468482 32468596 -52969884 + MIR SINE MIR 50 180 -82 1841 164 3 3 chr17 32468596 32468900 -52969580 - AluSx SINE Alu -8 304 1 472 197 103 54 chr17 32468900 32468988 -52969492 + MIR SINE MIR 180 262 0 386 192 14 0 chr17 32468991 32469064 -52969416 + L2 LINE L2 3225 3298 -15 563 92 11 0 chr17 32469066 32469153 -52969327 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 214 254 18 0 chr17 32469256 32469311 -52969169 - MIR3 SINE MIR -2 206 151 455 314 19 19 chr17 32469443 32469602 -52968878 - MIR3 SINE MIR -46 162 4 1727 174 0 0 chr17 32469652 32469955 -52968525 - AluJo SINE Alu 0 303 1 30 0 0 0 chr17 32469955 32469985 -52968495 + AT_rich Low_complexity Low_complexity 1 30 0 1656 170 0 39 chr17 32470123 32470434 -52968046 - AluJo SINE Alu -13 299 1 415 269 138 8 chr17 32470503 32470633 -52967847 - L1MC4 LINE L1 0 8042 7896 349 317 59 34 chr17 32470688 32470929 -52967551 - L1MC4a LINE L1 -224 5946 5810 410 266 0 0 chr17 32470971 32471065 -52967415 - L1MC4a LINE L1 -462 5708 5615 824 244 156 39 chr17 32471067 32471506 -52966974 - MLT1G LTR MaLR -2 590 103 256 248 33 113 chr17 32471550 32471626 -52966854 - L1MC4a LINE L1 -507 5614 5534 2032 114 0 41 chr17 32471626 32471931 -52966549 - AluSx SINE Alu -21 291 1 256 248 33 113 chr17 32471931 32472062 -52966418 - L1MC4a LINE L1 -587 5534 5426 1939 168 7 0 chr17 32472094 32472398 -52966082 - AluJo SINE Alu -6 306 1 451 286 63 11 chr17 32472398 32472573 -52965907 - L1MC4a LINE L1 -722 5442 5259 190 257 90 56 chr17 32473048 32473192 -52965288 + L2 LINE L2 2916 3064 -208 818 196 37 0 chr17 32473448 32473611 -52964869 - MER3 DNA MER1_type -78 131 10 411 134 247 21 chr17 32473611 32473708 -52964772 + AluJb SINE Alu 2 120 -192 369 186 29 0 chr17 32473869 32473939 -52964541 + MIR SINE MIR 56 127 -81 227 196 0 36 chr17 32474019 32474075 -52964405 + G-rich Low_complexity Low_complexity 2 55 0 299 306 139 7 chr17 32474649 32474793 -52963687 + MIR SINE MIR 90 252 -10 714 72 0 0 chr17 32476041 32476138 -52962342 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 718 145 21 41 chr17 32476201 32476346 -52962134 - FLAM_C SINE Alu 0 143 2 250 250 0 0 chr17 32476365 32476433 -52962047 - MIR SINE MIR -131 131 64 416 306 0 0 chr17 32476769 32476877 -52961603 - MER5B DNA MER1_type -69 109 2 361 221 84 0 chr17 32477700 32477795 -52960685 - MER5A DNA MER1_type -83 106 4 395 266 18 25 chr17 32478292 32478434 -52960046 + MIR3 SINE MIR 45 185 -47 465 301 49 12 chr17 32478530 32478693 -52959787 + MIR SINE MIR 56 224 -38 336 48 0 0 chr17 32478693 32478735 -52959745 + (CA)n Simple_repeat Simple_repeat 1 42 0 289 312 152 0 chr17 32479403 32479541 -52958939 + MIR SINE MIR 64 222 -40 2039 142 20 0 chr17 32479546 32479848 -52958632 + AluSq SINE Alu 1 308 -5 300 320 31 23 chr17 32480224 32480352 -52958128 + L3b LINE CR1 1267 1395 -188 1569 188 0 11 chr17 32481112 32481384 -52957096 - AluJb SINE Alu -6 306 38 269 221 0 29 chr17 32481631 32481699 -52956781 + (CA)n Simple_repeat Simple_repeat 1 66 0 687 195 92 18 chr17 32483700 32483864 -52954616 + MER45A DNA AcHobo 1 176 -2 186 267 189 0 chr17 32484016 32484106 -52954374 + MIR3 SINE MIR 78 184 -24 752 204 6 0 chr17 32484169 32484345 -52954135 + (CA)n Simple_repeat Simple_repeat 1 177 0 208 106 0 43 chr17 32485371 32485418 -52953062 + (CA)n Simple_repeat Simple_repeat 1 45 0 252 274 141 15 chr17 32487544 32487679 -52950801 - MIR SINE MIR -80 182 31 438 258 172 19 chr17 32488826 32489145 -52949335 - L2 LINE L2 -225 3088 2712 472 227 42 0 chr17 32489159 32489278 -52949202 + MIR SINE MIR 83 206 -56 277 267 58 23 chr17 32489414 32489500 -52948980 - L2 LINE L2 -6 3307 3219 255 232 0 0 chr17 32490255 32490311 -52948169 - L2 LINE L2 -1 3271 3216 373 267 208 28 chr17 32490807 32490986 -52947494 - MIR SINE MIR -57 205 6 2188 119 30 0 chr17 32490991 32491294 -52947186 - AluSx SINE Alu 0 312 1 345 231 127 15 chr17 32492476 32492610 -52945870 + MIR SINE MIR 70 218 -44 235 88 15 88 chr17 32492877 32492945 -52945535 + (CGAGG)n Simple_repeat Simple_repeat 4 66 0 392 275 90 25 chr17 32493336 32493536 -52944944 - MIR SINE MIR -12 250 38 662 267 17 61 chr17 32494203 32494402 -52944078 + L1M4 LINE L1 2685 2863 -3283 2187 87 7 0 chr17 32494402 32494708 -52943772 + AluSc SINE Alu 1 308 0 662 267 17 61 chr17 32494708 32494866 -52943614 + L1M4 LINE L1 2863 3027 -3119 1238 149 5 23 chr17 32494961 32495175 -52943305 + MER2 DNA MER2_type 1 210 -135 330 103 29 73 chr17 32495187 32495255 -52943225 - Alu SINE Alu 0 302 238 270 0 0 0 chr17 32495707 32495737 -52942743 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 569 241 14 24 chr17 32496087 32496257 -52942223 + MIR SINE MIR 6 172 -67 192 77 0 0 chr17 32496291 32496317 -52942163 + (TG)n Simple_repeat Simple_repeat 1 26 0 285 262 0 0 chr17 32496652 32496713 -52941767 + L2 LINE L2 3200 3260 -12 1894 159 14 7 chr17 32496713 32497009 -52941471 + AluJo SINE Alu 1 298 -14 393 297 179 20 chr17 32497089 32497335 -52941145 - L1ME4a LINE L1 -28 6093 5809 385 282 43 54 chr17 32497350 32497627 -52940853 + L1ME3A LINE L1 2675 2948 -3198 2083 138 0 0 chr17 32497627 32497961 -52940519 + AluSx SINE Alu 1 334 0 5030 131 84 104 chr17 32497966 32498010 -52940470 + L1MC3 LINE L1 6378 6421 -1364 531 139 0 0 chr17 32498010 32498096 -52940384 - L1PA13 LINE L1 -3 6160 6075 5030 131 84 104 chr17 32498096 32498772 -52939708 + L1MC3 LINE L1 6421 7109 -676 278 333 0 0 chr17 32498772 32498859 -52939621 + MLT1F1 LTR MaLR 39 125 -442 2312 98 3 0 chr17 32498862 32499157 -52939323 + AluSx SINE Alu 5 300 -12 5030 131 84 104 chr17 32499157 32499346 -52939134 + L1MC3 LINE L1 7111 7302 -483 2175 75 3 39 chr17 32499346 32499663 -52938817 + AluSx SINE Alu 12 318 0 5030 131 84 104 chr17 32499663 32499881 -52938599 + L1MC3 LINE L1 7302 7574 -211 1305 140 12 66 chr17 32499882 32500139 -52938341 - L1MA4 LINE L1 -437 5863 5621 26 0 0 0 chr17 32500169 32500195 -52938285 + AT_rich Low_complexity Low_complexity 1 26 0 1036 156 13 34 chr17 32500202 32500281 -52938199 + L1MC3 LINE L1 7552 7631 -154 1807 128 68 0 chr17 32500281 32500532 -52937948 + AluJb SINE Alu 1 268 -44 306 0 0 0 chr17 32500532 32500566 -52937914 + (TAA)n Simple_repeat Simple_repeat 1 34 0 1036 156 13 34 chr17 32500566 32500722 -52937758 + L1MC3 LINE L1 7629 7783 -2 256 225 79 11 chr17 32500712 32500801 -52937679 + L1ME3A LINE L1 2926 3020 -3126 * 1061 278 71 10 chr17 32500806 32501115 -52937365 + MLT1I LTR MaLR 1 328 -81 414 249 96 39 chr17 32501387 32501773 -52936707 + L1ME3A LINE L1 4984 5391 -755 756 234 11 21 chr17 32501829 32502017 -52936463 + AluJb SINE Alu 121 306 -6 507 143 0 0 chr17 32502097 32502181 -52936299 + AluJ/FRAM SINE Alu 229 312 0 429 318 63 31 chr17 32502186 32502504 -52935976 + L1ME3A LINE L1 5610 5937 -233 249 81 27 0 chr17 32502730 32502767 -52935713 - LTR33A LTR ERVL 0 523 486 * 447 233 61 33 chr17 32502737 32502917 -52935563 - LTR41 LTR ERVL -6 767 583 593 228 54 54 chr17 32503157 32503341 -52935139 - LTR41 LTR ERVL -589 184 1 2133 141 7 0 chr17 32503508 32503805 -52934675 + AluSx SINE Alu 1 299 -13 361 297 29 14 chr17 32503978 32504116 -52934364 + L1M4 LINE L1 2148 2287 -3859 3220 134 29 20 chr17 32504428 32504530 -52933950 + L1MB3 LINE L1 5587 5687 -496 2261 124 0 0 chr17 32504530 32504837 -52933643 + AluSx SINE Alu 1 307 -5 3220 134 29 20 chr17 32504837 32505325 -52933155 + L1MB3 LINE L1 5687 6182 -1 2266 120 10 0 chr17 32505335 32505644 -52932836 + AluSx SINE Alu 1 312 0 349 254 107 8 chr17 32505986 32506108 -52932372 + MIR SINE MIR 20 153 -109 1280 175 35 4 chr17 32506315 32506572 -52931908 - L1MD2 LINE L1 0 6359 6095 775 160 0 0 chr17 32506758 32506883 -52931597 + FLAM_C SINE Alu 1 125 -8 249 33 0 0 chr17 32506883 32506913 -52931567 + (GA)n Simple_repeat Simple_repeat 2 31 0 281 306 88 31 chr17 32507512 32507672 -52930808 + MIR SINE MIR 80 248 -14 606 97 26 0 chr17 32507985 32508098 -52930382 + CT-rich Low_complexity Low_complexity 1 116 0 391 307 0 0 chr17 32509688 32509789 -52928691 + MIR SINE MIR 111 211 -51 405 301 104 11 chr17 32510159 32510342 -52928138 + L2 LINE L2 2605 2804 -510 1709 188 17 11 chr17 32510849 32511136 -52927344 + AluJb SINE Alu 2 290 -22 1816 165 13 25 chr17 32511199 32511584 -52926896 + AluJo SINE Alu 1 381 0 346 292 102 42 chr17 32511634 32511918 -52926562 - MLT1K LTR MaLR 0 588 288 1409 236 107 40 chr17 32511922 32512498 -52925982 + MLT1G LTR MaLR 1 576 -14 1071 282 40 21 chr17 32512708 32512861 -52925619 - L1ME4a LINE L1 -126 5995 5846 2032 139 0 20 chr17 32512861 32513156 -52925324 - AluJo SINE Alu -12 300 12 1071 282 40 21 chr17 32513156 32513431 -52925049 - L1ME4a LINE L1 -275 5846 5559 798 156 11 15 chr17 32513431 32513697 -52924783 + CT-rich Low_complexity Low_complexity 1 264 0 1963 172 0 3 chr17 32513702 32513999 -52924481 - AluJb SINE Alu -16 296 1 2983 3 0 0 chr17 32514014 32514325 -52924155 - AluYa5 SINE Alu 0 311 1 461 291 123 19 chr17 32514352 32514613 -52923867 - L1ME4a LINE L1 -2266 5542 5255 2387 109 0 0 chr17 32514678 32514981 -52923499 - AluSg SINE Alu -7 303 1 1400 219 58 26 chr17 32515581 32515960 -52922520 + LTR16A1 LTR ERVL 65 455 -2 576 208 71 38 chr17 32516432 32516615 -52921865 + MLT1K LTR MaLR 393 581 -7 302 274 142 18 chr17 32517062 32517175 -52921305 + MIR SINE MIR 20 146 -116 334 335 91 23 chr17 32517810 32518031 -52920449 - MIR SINE MIR -6 256 21 596 306 42 14 chr17 32518409 32518655 -52919825 + MIR SINE MIR 11 259 -3 1815 159 3 32 chr17 32518660 32518974 -52919506 + AluJo SINE Alu 1 305 -7 1051 205 40 9 chr17 32519050 32519274 -52919206 - MIR SINE MIR 0 262 32 2114 118 0 21 chr17 32519582 32519871 -52918609 - AluSq SINE Alu -29 284 2 609 212 8 30 chr17 32519878 32520010 -52918470 - FLAM_C SINE Alu -4 129 1 183 300 0 17 chr17 32520011 32520071 -52918409 - L2 LINE L2 -349 2964 2906 548 303 37 6 chr17 32520718 32520908 -52917572 + MIR SINE MIR 9 202 -60 235 304 0 0 chr17 32521417 32521486 -52916994 + MIR SINE MIR 63 131 -77 326 23 23 0 chr17 32521576 32521619 -52916861 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 185 341 23 0 chr17 32521658 32521746 -52916734 + MIR3 SINE MIR 109 198 -10 241 301 124 13 chr17 32522453 32522606 -52915874 + MIR SINE MIR 89 258 -4 183 267 0 0 chr17 32523323 32523368 -52915112 + MIR SINE MIR 108 152 -56 1044 88 0 29 chr17 32523370 32523507 -52914973 + AluSq/x SINE Alu 1 133 -179 264 167 0 0 chr17 32523624 32523672 -52914808 + CT-rich Low_complexity Low_complexity 3 50 0 478 246 43 22 chr17 32524075 32524213 -52914267 - MLT1J1 LTR MaLR -239 207 67 5606 99 4 2 chr17 32524213 32524595 -52913885 - L1PA15 LINE L1 -2 6163 5783 1866 109 16 8 chr17 32524595 32524852 -52913628 - AluSq SINE Alu -54 259 1 5606 99 4 2 chr17 32524852 32525300 -52913180 - L1PA15 LINE L1 -382 5783 5332 184 330 140 10 chr17 32525541 32525641 -52912839 + L2 LINE L2 2924 3036 -277 847 173 0 0 chr17 32525689 32525822 -52912658 + AluJo SINE Alu 1 133 -179 381 260 39 65 chr17 32525826 32525980 -52912500 - MIR3 SINE MIR -48 160 11 339 323 0 32 chr17 32526006 32526130 -52912350 + MIR3 SINE MIR 59 178 -30 387 246 48 32 chr17 32526296 32526422 -52912058 - MIR SINE MIR -37 225 98 309 366 69 27 chr17 32526425 32526687 -52911793 + L3 LINE CR1 1276 1548 -29 695 263 48 24 chr17 32526687 32526938 -52911542 - MER113 DNA MER1_type? -50 471 215 303 207 78 35 chr17 32526947 32527063 -52911417 - MER113 DNA MER1_type? -275 246 126 4403 141 24 41 chr17 32527073 32527976 -52910504 + L1MC2 LINE L1 5186 6073 -271 1662 263 65 4 chr17 32527976 32528456 -52910024 + L1ME3 LINE L1 5632 6140 -22 307 247 47 0 chr17 32529098 32529183 -52909297 - L3 LINE CR1 -58 1519 1431 983 196 12 0 chr17 32529475 32529643 -52908837 + AluJo SINE Alu 137 306 -6 276 87 0 87 chr17 32529645 32529714 -52908766 + (GGGAA)n Simple_repeat Simple_repeat 2 64 0 183 42 0 0 chr17 32530087 32530111 -52908369 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1071 143 7 0 chr17 32530114 32530261 -52908219 - AluJo/FRAM SINE Alu -31 281 134 2012 127 31 10 chr17 32530261 32530553 -52907927 - AluSx SINE Alu -14 298 1 1920 154 0 16 chr17 32530553 32530858 -52907622 - AluJb SINE Alu -12 300 1 380 125 200 67 chr17 32530868 32530988 -52907492 - MIR SINE MIR -107 155 20 314 289 195 8 chr17 32532358 32532486 -52905994 + MIR3 SINE MIR 20 171 -37 325 303 136 13 chr17 32533399 32533554 -52904926 - MIR SINE MIR 0 262 89 189 311 87 10 chr17 32533652 32533755 -52904725 - MIR SINE MIR -58 150 40 403 255 70 38 chr17 32535148 32535305 -52903175 - MIR SINE MIR -13 249 88 346 345 28 14 chr17 32535364 32535509 -52902971 + MIR3 SINE MIR 3 149 -59 2280 89 4 0 chr17 32535729 32536048 -52902432 + AluSx SINE Alu 1 320 0 2335 119 3 0 chr17 32536127 32536437 -52902043 + AluSx SINE Alu 1 311 -1 352 299 28 0 chr17 32536437 32536544 -52901936 + MIR SINE MIR 145 254 -8 3641 166 43 45 chr17 32537111 32537205 -52901275 + L1MB4 LINE L1 5350 5443 -737 1910 115 65 11 chr17 32537205 32537484 -52900996 + AluSx SINE Alu 1 294 -18 3641 166 43 45 chr17 32537484 32538221 -52900259 + L1MB4 LINE L1 5443 6180 0 437 263 6 17 chr17 32539106 32539285 -52899195 + (CA)n Simple_repeat Simple_repeat 1 177 0 432 265 6 17 chr17 32539323 32539504 -52898976 + (CA)n Simple_repeat Simple_repeat 1 179 0 314 276 0 43 chr17 32539429 32539614 -52898866 + (CTCA)n Simple_repeat Simple_repeat 2 178 0 * 433 247 19 13 chr17 32539648 32539806 -52898674 + (CA)n Simple_repeat Simple_repeat 1 159 0 451 282 0 28 chr17 32539829 32540010 -52898470 + (CA)n Simple_repeat Simple_repeat 2 177 0 322 288 0 20 chr17 32540025 32540171 -52898309 + (CA)n Simple_repeat Simple_repeat 1 143 0 349 292 0 32 chr17 32540209 32540394 -52898086 + (CA)n Simple_repeat Simple_repeat 1 179 0 313 343 12 0 chr17 32540470 32540642 -52897838 + (CA)n Simple_repeat Simple_repeat 1 174 0 298 291 13 0 chr17 32540719 32540798 -52897682 - MIR3 SINE MIR -15 193 114 213 307 27 13 chr17 32540917 32540992 -52897488 + MIR SINE MIR 137 212 -50 180 77 0 0 chr17 32541519 32541545 -52896935 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 835 235 18 0 chr17 32541672 32541842 -52896638 - MER63A DNA MER1_type -37 173 1 205 198 11 33 chr17 32541951 32542011 -52896469 + MIR SINE MIR 104 160 -102 481 289 128 13 chr17 32542024 32542089 -52896391 - MER5A DNA MER1_type -9 180 124 1653 177 19 53 chr17 32542089 32542467 -52896013 - MLT1A1 LTR MaLR 0 365 1 481 289 128 13 chr17 32542467 32542557 -52895923 - MER5A DNA MER1_type -65 124 7 2133 123 13 10 chr17 32543246 32543546 -52894934 - AluSx SINE Alu -11 301 1 180 267 0 0 chr17 32543570 32543615 -52894865 + L2 LINE L2 3143 3187 -85 531 90 0 0 chr17 32544519 32544597 -52893883 + (TTCA)n Simple_repeat Simple_repeat 1 78 0 999 267 90 15 chr17 32544597 32544660 -52893820 - L2 LINE L2 -10 3303 3246 1905 185 25 2 chr17 32544660 32545065 -52893415 + L1MB4 LINE L1 5767 6180 0 2160 137 0 3 chr17 32545071 32545384 -52893096 + AluSx SINE Alu 1 312 0 999 267 90 15 chr17 32545384 32545767 -52892713 - L2 LINE L2 -71 3242 2812 2482 103 0 0 chr17 32546197 32546508 -52891972 - AluSx SINE Alu -1 311 1 1246 245 109 17 chr17 32546854 32547632 -52890848 + L2 LINE L2 2457 3313 0 302 180 18 5 chr17 32547738 32547817 -52890663 - MIR SINE MIR -65 143 64 285 281 62 31 chr17 32548606 32548702 -52889778 + MIR SINE MIR 159 257 -5 287 302 12 12 chr17 32549112 32549198 -52889282 - MIR SINE MIR -117 145 60 806 302 0 12 chr17 32549356 32549598 -52888882 - MIR SINE MIR -22 240 2 335 306 98 29 chr17 32552312 32552485 -52885995 - L3 LINE CR1 -24 1553 1369 421 224 15 82 chr17 32553029 32553163 -52885317 - L3 LINE CR1 -207 1370 1246 2413 92 0 13 chr17 32553495 32553809 -52884671 + AluSx SINE Alu 1 310 -2 234 268 31 10 chr17 32554160 32554257 -52884223 + (TG)n Simple_repeat Simple_repeat 1 99 0 289 380 73 27 chr17 32554349 32554499 -52883981 + L2 LINE L2 3107 3263 -9 219 69 0 0 chr17 32554509 32554538 -52883942 + (AACTG)n Simple_repeat Simple_repeat 4 32 0 183 129 0 0 chr17 32554736 32554767 -52883713 + (TG)n Simple_repeat Simple_repeat 1 31 0 1006 229 39 92 chr17 32555869 32556305 -52882175 + L1ME3A LINE L1 5749 6161 -9 2855 187 39 34 chr17 32556472 32557247 -52881233 - L1M4 LINE L1 -2804 3342 2564 342 297 0 20 chr17 32557515 32557616 -52880864 - MIR3 SINE MIR -22 186 88 413 273 19 14 chr17 32557793 32557920 -52880560 + MIR SINE MIR 22 142 -66 474 294 35 25 chr17 32558290 32558487 -52879993 + L1MC5 LINE L1 7715 7913 -48 215 30 0 30 chr17 32559178 32559211 -52879269 + (CA)n Simple_repeat Simple_repeat 1 32 0 302 307 11 6 chr17 32559233 32559409 -52879071 + (CA)n Simple_repeat Simple_repeat 1 177 0 418 194 11 17 chr17 32559448 32559628 -52878852 + (CA)n Simple_repeat Simple_repeat 1 179 0 198 227 0 0 chr17 32559738 32559813 -52878667 + (CA)n Simple_repeat Simple_repeat 1 75 0 366 253 0 0 chr17 32559833 32560007 -52878473 + (CA)n Simple_repeat Simple_repeat 2 175 0 238 253 0 12 chr17 32560021 32560187 -52878293 + (CA)n Simple_repeat Simple_repeat 2 165 0 223 242 0 0 chr17 32560236 32560298 -52878182 + (CA)n Simple_repeat Simple_repeat 2 63 0 203 270 79 11 chr17 32560374 32560463 -52878017 + MIR SINE MIR 95 189 -73 218 268 73 0 chr17 32560870 32560952 -52877528 - MIR SINE MIR -115 147 60 247 265 0 0 chr17 32561344 32561393 -52877087 + polypyrimidine Low_complexity Low_complexity 1 49 0 263 224 188 0 chr17 32561560 32561645 -52876835 + MIR SINE MIR 119 219 -43 2187 129 0 10 chr17 32561654 32561965 -52876515 + AluSx SINE Alu 1 308 -4 311 149 52 3 chr17 32561985 32562055 -52876425 + AluJ/FLAM SINE Alu 1 58 -244 971 171 6 0 chr17 32562055 32562213 -52876267 - AluJo SINE Alu -139 173 15 2676 133 50 26 chr17 32562318 32562815 -52875665 - L1MA6 LINE L1 -188 6112 5604 798 188 0 0 chr17 32562836 32563001 -52875479 + CT-rich Low_complexity Low_complexity 4 168 0 731 212 0 0 chr17 32563003 32563135 -52875345 - FRAM SINE Alu -13 163 32 1357 187 33 0 chr17 32563135 32563408 -52875072 - L1MA6 LINE L1 -847 5299 5018 399 250 73 8 chr17 32563411 32563535 -52874945 - MIR3 SINE MIR -14 194 63 1784 213 24 37 chr17 32563662 32564127 -52874353 - MLT1C LTR MaLR -1 466 8 1613 168 44 47 chr17 32564794 32565092 -52873388 + AluJo SINE Alu 1 297 -15 2087 102 0 71 chr17 32565094 32565451 -52873029 + AluSx SINE Alu 1 312 0 794 153 0 0 chr17 32566382 32566506 -52871974 + FLAM_C SINE Alu 1 124 -9 273 109 0 0 chr17 32566506 32566552 -52871928 + (TA)n Simple_repeat Simple_repeat 2 47 0 182 304 0 0 chr17 32567432 32567478 -52871002 - L2 LINE L2 -12 3301 3256 1975 157 0 40 chr17 32567496 32567821 -52870659 + AluJo SINE Alu 1 312 0 481 187 60 45 chr17 32567850 32567984 -52870496 + AluJo SINE Alu 7 142 -170 215 30 0 30 chr17 32568320 32568353 -52870127 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1712 158 11 0 chr17 32568361 32568621 -52869859 - AluJb SINE Alu -49 263 1 235 203 85 0 chr17 32568993 32569052 -52869428 - L2 LINE L2 -1 3312 3249 207 318 0 0 chr17 32569297 32569360 -52869120 + MIR SINE MIR 84 146 -116 800 169 6 42 chr17 32569362 32569528 -52868952 + L1MD3 LINE L1 7834 7993 -2 2260 95 0 3 chr17 32569584 32569891 -52868589 - AluSx SINE Alu 0 306 1 2046 126 4 0 chr17 32569891 32570169 -52868311 - AluSq SINE Alu -34 279 1 344 282 115 35 chr17 32570195 32570369 -52868111 - MIR SINE MIR -71 191 4 332 243 25 30 chr17 32570955 32571084 -52867396 + MIR SINE MIR 33 160 -66 185 274 65 16 chr17 32571233 32571295 -52867185 + L2 LINE L2 3156 3220 -52 365 235 0 0 chr17 32571343 32571411 -52867069 - MIR SINE MIR -88 174 107 213 237 0 0 chr17 32571503 32571562 -52866918 + (TGGA)n Simple_repeat Simple_repeat 1 59 0 338 237 29 12 chr17 32571621 32571794 -52866686 + (TGGA)n Simple_repeat Simple_repeat 1 176 0 418 279 130 7 chr17 32572366 32572520 -52865960 - MIR3 SINE MIR -3 205 33 420 285 44 37 chr17 32573071 32573277 -52865203 - MIR SINE MIR -48 214 2 297 289 103 53 chr17 32573525 32573788 -52864692 + L2 LINE L2 2878 3153 -119 267 278 53 23 chr17 32574233 32574366 -52864114 + MIR3 SINE MIR 44 180 -28 472 212 60 33 chr17 32574508 32574659 -52863821 - MIR SINE MIR -1 261 107 186 43 0 0 chr17 32574931 32574954 -52863526 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 208 366 10 0 chr17 32575088 32575189 -52863291 + MIR3 SINE MIR 62 163 -45 192 250 118 0 chr17 32577291 32577367 -52861113 + L2 LINE L2 3187 3271 -1 272 258 16 0 chr17 32577659 32577721 -52860759 + MIR SINE MIR 112 174 -88 326 250 17 136 chr17 32578404 32578580 -52859900 - MER5B DNA MER1_type -15 163 9 195 219 0 0 chr17 32578622 32578663 -52859817 - L2 LINE L2 -3 3269 3229 513 285 22 22 chr17 32578861 32579040 -52859440 - MIR SINE MIR -6 256 78 264 284 274 0 chr17 32580078 32580180 -52858300 - L2 LINE L2 0 3272 3143 2369 99 0 3 chr17 32582957 32583260 -52855220 + AluSx SINE Alu 1 302 -10 312 247 54 11 chr17 32584325 32584418 -52854062 - L2 LINE L2 -28 3285 3189 318 224 215 0 chr17 32584541 32584648 -52853832 + MIR SINE MIR 21 150 -58 1850 109 148 42 chr17 32584651 32584855 -52853625 - MSTA LTR MaLR -2 426 245 2402 86 0 0 chr17 32584855 32585147 -52853333 - AluSg SINE Alu -18 292 1 1850 109 148 42 chr17 32585147 32585327 -52853153 - MSTA LTR MaLR -183 245 1 574 309 26 10 chr17 32585331 32585525 -52852955 - L2 LINE L2 0 3313 3117 228 158 0 0 chr17 32585535 32585573 -52852907 + L1MC/D LINE L1 5713 5750 -492 323 313 89 41 chr17 32585574 32585820 -52852660 - L2 LINE L2 -420 2894 2637 1523 241 131 22 chr17 32585822 32586564 -52851916 + L1ME3 LINE L1 5323 6153 -9 1062 109 0 7 chr17 32586721 32586868 -52851612 + AluJb SINE Alu 164 309 -3 1795 121 62 49 chr17 32586900 32587207 -52851273 + AluJo SINE Alu 1 311 -1 289 282 107 47 chr17 32587250 32587449 -52851031 + MIR SINE MIR 32 261 -1 229 262 24 0 chr17 32587527 32587547 -52850933 - HAL1b LINE L1 -30 1318 1299 330 181 38 95 chr17 32587547 32587652 -52850828 - L1ME4a LINE L1 -60 6061 1233 315 228 0 30 chr17 32587671 32587772 -52850708 - HAL1b LINE L1 0 1348 1251 288 304 0 38 chr17 32588959 32589038 -52849442 - MIR SINE MIR -70 192 117 933 234 21 11 chr17 32589045 32589331 -52849149 + MER33 DNA MER1_type 1 289 -35 2001 160 0 3 chr17 32589402 32589696 -52848784 + AluJb SINE Alu 1 293 -19 830 184 119 0 chr17 32589696 32589881 -52848599 - MER58A DNA MER1_type -17 207 1 339 333 70 0 chr17 32589901 32590030 -52848450 + MIR SINE MIR 8 145 -117 1756 239 60 34 chr17 32590030 32590643 -52847837 + L1ME4a LINE L1 5306 5961 -160 2338 78 4 0 chr17 32590643 32590946 -52847534 + AluSp SINE Alu 1 304 0 1756 239 60 34 chr17 32590946 32591108 -52847372 + L1ME4a LINE L1 5961 6117 -4 507 321 113 50 chr17 32591137 32591616 -52846864 + L1ME LINE L1 5310 5818 -303 627 237 79 75 chr17 32591851 32592020 -52846460 + MIR SINE MIR 16 188 -74 1947 140 50 0 chr17 32592020 32592299 -52846181 + AluSx SINE Alu 1 293 -19 627 237 79 75 chr17 32592299 32592357 -52846123 + MIR SINE MIR 188 244 -18 415 280 172 11 chr17 32592570 32592756 -52845724 + MIR SINE MIR 31 246 -16 437 301 45 46 chr17 32592985 32593185 -52845295 + MIR SINE MIR 3 200 -62 2399 108 0 0 chr17 32593446 32593751 -52844729 + AluSx SINE Alu 1 305 -7 202 244 0 0 chr17 32593771 32593816 -52844664 + (TAA)n Simple_repeat Simple_repeat 2 46 0 581 274 72 24 chr17 32593819 32594027 -52844453 - MIR SINE MIR -32 230 13 232 283 0 0 chr17 32595212 32595285 -52843195 + C-rich Low_complexity Low_complexity 1 73 0 238 304 74 15 chr17 32597874 32598009 -52840471 - MIR SINE MIR -7 255 113 201 213 0 0 chr17 32598556 32598603 -52839877 + (TG)n Simple_repeat Simple_repeat 2 48 0 249 372 53 18 chr17 32599757 32599983 -52838497 - L2 LINE L2 -212 3060 2827 1077 275 0 26 chr17 32600749 32601018 -52837462 - MIR SINE MIR 0 262 1 380 263 197 0 chr17 32601280 32601417 -52837063 + MIR3 SINE MIR 19 182 -26 297 273 0 0 chr17 32601417 32601483 -52836997 + MIR3 SINE MIR 129 194 -14 646 268 0 18 chr17 32601487 32601655 -52836825 + MER5B DNA MER1_type 2 166 -12 244 247 96 0 chr17 32602918 32602991 -52835489 + MIR SINE MIR 112 191 -71 26 93 0 0 chr17 32603053 32603128 -52835352 + AT_rich Low_complexity Low_complexity 1 75 0 203 321 0 46 chr17 32603604 32603735 -52834745 + CT-rich Low_complexity Low_complexity 3 127 0 438 110 25 42 chr17 32603759 32603877 -52834603 + CT-rich Low_complexity Low_complexity 1 116 0 331 248 53 110 chr17 32604189 32604395 -52834085 + MIR SINE MIR 16 210 -52 2122 104 0 24 chr17 32604569 32604887 -52833593 + AluSg SINE Alu 2 312 0 455 279 7 15 chr17 32604919 32605055 -52833425 - MIR SINE MIR -117 145 11 414 201 60 60 chr17 32606513 32606541 -52831939 + L2 LINE L2 3178 3205 -108 2359 99 3 3 chr17 32606541 32606844 -52831636 + AluSp SINE Alu 1 303 -10 414 201 60 60 chr17 32606844 32606949 -52831531 + L2 LINE L2 3204 3311 -2 276 238 43 162 chr17 32606980 32607165 -52831315 - MIR SINE MIR -93 169 7 779 121 0 24 chr17 32607416 32607540 -52830940 + FLAM_C SINE Alu 1 121 -12 22 56 0 0 chr17 32607547 32607583 -52830897 + AT_rich Low_complexity Low_complexity 1 36 0 258 226 75 0 chr17 32607742 32607795 -52830685 - MIR SINE MIR -87 175 119 495 265 45 58 chr17 32607811 32608034 -52830446 - L2 LINE L2 -1 3312 3093 206 189 0 19 chr17 32608131 32608184 -52830296 + GA-rich Low_complexity Low_complexity 4 55 0 549 316 11 37 chr17 32608416 32608633 -52829847 + MIR SINE MIR 3 212 -50 560 254 146 0 chr17 32609494 32609659 -52828821 + MER5A DNA MER1_type 1 189 0 263 320 82 8 chr17 32610756 32610878 -52827602 - L2 LINE L2 -9 3263 3133 421 301 110 38 chr17 32610923 32611159 -52827321 + MIR SINE MIR 9 261 -1 591 249 30 24 chr17 32611822 32611987 -52826493 + MIR SINE MIR 20 185 -77 255 306 59 0 chr17 32612053 32612101 -52826379 - L2 LINE L2 -34 3279 3235 2498 100 0 0 chr17 32612101 32612412 -52826068 + AluSx SINE Alu 1 311 -1 255 306 59 0 chr17 32612412 32612448 -52826032 - L2 LINE L2 -78 3235 3190 228 304 161 18 chr17 32612510 32612678 -52825802 - L3 LINE CR1 -81 1496 1305 397 204 71 0 chr17 32612891 32613004 -52825476 + LTR16C LTR ERVL 371 491 0 180 268 49 24 chr17 32614582 32614664 -52823816 - MIR SINE MIR -80 128 45 294 120 0 20 chr17 32614894 32614944 -52823536 + MLT1K LTR MaLR 510 558 -30 386 346 26 6 chr17 32615046 32615202 -52823278 - MIR3 SINE MIR -48 160 2 896 301 75 27 chr17 32616055 32616390 -52822090 + MLT1I LTR MaLR 59 409 0 208 255 59 111 chr17 32616440 32616896 -52821584 + MER5A DNA MER1_type 2 146 -43 251 339 61 42 chr17 32616477 32616519 -52821961 - MER5A DNA MER1_type -21 168 128 2267 122 3 0 chr17 32616519 32616823 -52821657 - AluSx SINE Alu -7 305 1 251 339 61 42 chr17 32616823 32616945 -52821535 - MER5A DNA MER1_type -61 128 1 220 229 0 0 chr17 32617304 32617352 -52821128 + A-rich Low_complexity Low_complexity 1 48 0 840 129 0 168 chr17 32618348 32618580 -52819900 - 7SK RNA RNA 0 193 1 2696 47 0 0 chr17 32619028 32619327 -52819153 + AluY SINE Alu 1 299 -12 545 271 73 26 chr17 32619654 32619846 -52818634 + MIR SINE MIR 10 210 -52 279 331 38 54 chr17 32621606 32621843 -52816637 + MIR SINE MIR 8 242 -20 208 222 0 48 chr17 32621845 32621908 -52816572 + L2 LINE L2 3201 3260 -12 2275 116 0 0 chr17 32621910 32622211 -52816269 + AluSx SINE Alu 1 301 -11 210 309 0 29 chr17 32622387 32622455 -52816025 - MIR SINE MIR -116 146 81 3978 82 12 21 chr17 32622472 32622896 -52815584 + MER41A LTR ERV1 1 420 -134 2458 77 7 0 chr17 32622896 32623195 -52815285 - AluSp SINE Alu -12 301 1 3978 82 12 21 chr17 32623195 32623329 -52815151 + MER41A LTR ERV1 420 554 0 522 326 63 17 chr17 32623418 32623657 -52814823 - MIR SINE MIR -1 261 12 356 319 61 57 chr17 32624084 32624313 -52814167 + MIR SINE MIR 24 253 -9 270 160 0 0 chr17 32624320 32624370 -52814110 + CT-rich Low_complexity Low_complexity 1 50 0 298 318 75 0 chr17 32624661 32624808 -52813672 - MIR3 SINE MIR -12 196 36 343 263 40 0 chr17 32625519 32625618 -52812862 - MER5B DNA MER1_type 0 178 76 1176 209 134 73 chr17 32625618 32625713 -52812767 - MLT1F1 LTR MaLR -7 535 447 2705 87 37 15 chr17 32625713 32626072 -52812408 - L1PB1 LINE L1 0 6151 5801 252 0 0 0 chr17 32626072 32626100 -52812380 + (TG)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr17 32626099 32626120 -52812360 + (TA)n Simple_repeat Simple_repeat 2 22 0 * 2705 87 37 15 chr17 32626100 32626163 -52812317 - L1PB1 LINE L1 -350 5801 5740 1176 209 134 73 chr17 32626163 32626573 -52811907 - MLT1F1 LTR MaLR -95 447 1 385 208 13 0 chr17 32626578 32626655 -52811825 - MER5B DNA MER1_type -100 78 1 2170 131 0 0 chr17 32627065 32627377 -52811103 - AluSx SINE Alu 0 312 1 213 226 0 0 chr17 32627379 32627432 -52811048 + CT-rich Low_complexity Low_complexity 2 54 0 198 219 0 0 chr17 32627872 32627936 -52810544 + CT-rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr17 32628360 32628381 -52810099 + AT_rich Low_complexity Low_complexity 1 21 0 409 282 267 0 chr17 32629189 32629384 -52809096 + MIR SINE MIR 13 259 -3 439 319 49 49 chr17 32629436 32629662 -52808818 - MIR SINE MIR -17 245 20 214 67 44 44 chr17 32629784 32629829 -52808651 + GA-rich Low_complexity Low_complexity 4 48 0 1058 171 11 0 chr17 32629950 32630125 -52808355 + AluSg/x SINE Alu 135 311 -1 251 229 0 16 chr17 32630125 32630186 -52808294 + GA-rich Low_complexity Low_complexity 1 60 0 366 302 31 31 chr17 32630226 32630355 -52808125 + L1ME3A LINE L1 6037 6165 -5 330 143 18 0 chr17 32630368 32630424 -52808056 + L1MB7 LINE L1 6128 6184 0 2127 117 3 0 chr17 32630946 32631245 -52807235 - AluSq SINE Alu -13 300 1 1891 155 0 0 chr17 32631254 32631550 -52806930 - AluJo SINE Alu -15 297 2 411 286 8 0 chr17 32631728 32631847 -52806633 - MER103 DNA DNA -44 122 3 587 299 108 5 chr17 32631919 32632089 -52806391 + MIR SINE MIR 21 219 -43 2024 116 3 0 chr17 32632089 32632373 -52806107 + AluSx SINE Alu 1 285 -27 587 299 108 5 chr17 32632373 32632416 -52806064 + MIR SINE MIR 219 256 -6 733 256 64 39 chr17 32632625 32632859 -52805621 + MIR SINE MIR 23 262 0 2623 153 5 21 chr17 32633093 32633524 -52804956 - MSTB LTR MaLR -2 424 1 194 328 156 16 chr17 32633680 32633808 -52804672 - MIR SINE MIR -115 147 2 197 354 38 32 chr17 32635233 32635391 -52803089 - L2 LINE L2 -466 2848 2690 978 292 8 4 chr17 32635875 32636115 -52802365 + MIR SINE MIR 16 256 -6 189 307 44 88 chr17 32636097 32636117 -52802363 - L2 LINE L2 -8 3305 3286 * 2423 69 0 0 chr17 32636117 32636421 -52802059 - AluY SINE Alu -7 304 1 189 307 44 88 chr17 32636421 32636514 -52801966 - L2 LINE L2 -27 3286 3197 220 319 138 0 chr17 32636715 32636831 -52801649 + L2 LINE L2 2929 3060 -212 835 161 0 15 chr17 32637299 32637614 -52800866 + FLAM_C SINE Alu 2 314 0 369 317 83 0 chr17 32637949 32638094 -52800386 + MIR SINE MIR 20 176 -86 2062 102 0 11 chr17 32638216 32638529 -52799951 - AluSc SINE Alu 0 310 1 219 295 0 0 chr17 32638705 32638817 -52799663 + (TG)n Simple_repeat Simple_repeat 2 113 0 516 356 0 0 chr17 32638852 32639026 -52799454 + (TG)n Simple_repeat Simple_repeat 1 174 0 183 257 0 0 chr17 32639041 32639115 -52799365 + (TG)n Simple_repeat Simple_repeat 2 75 0 230 298 0 36 chr17 32639122 32639206 -52799274 + GA-rich Low_complexity Low_complexity 4 84 0 508 285 14 0 chr17 32639738 32639882 -52798598 + MIR3 SINE MIR 63 208 0 398 261 123 0 chr17 32640553 32640683 -52797797 + MIR SINE MIR 113 258 -4 347 362 90 1 chr17 32641288 32641456 -52797024 + MIR SINE MIR 8 188 -62 982 185 21 5 chr17 32641960 32642149 -52796331 - AluJb SINE Alu -17 295 104 251 298 65 6 chr17 32642244 32642410 -52796070 + MIR SINE MIR 23 196 -62 224 265 0 0 chr17 32642960 32643022 -52795458 + C-rich Low_complexity Low_complexity 1 62 0 680 204 0 6 chr17 32643260 32643432 -52795048 + (TG)n Simple_repeat Simple_repeat 1 171 0 196 274 0 0 chr17 32644179 32644230 -52794250 + L2 LINE L2 3139 3189 -83 318 290 120 43 chr17 32644333 32644526 -52793954 + MIR SINE MIR 32 250 -12 297 0 0 0 chr17 32644638 32644671 -52793809 + (CA)n Simple_repeat Simple_repeat 2 34 0 1558 169 32 14 chr17 32645513 32645617 -52792863 + AluJb SINE Alu 16 117 -195 207 0 0 0 chr17 32645617 32645640 -52792840 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1558 169 32 14 chr17 32645640 32645819 -52792661 + AluJb SINE Alu 117 304 -8 403 323 41 10 chr17 32645823 32646018 -52792462 - MIR SINE MIR -56 206 6 495 229 171 7 chr17 32646033 32646173 -52792307 - L1M4 LINE L1 -1043 5103 4941 295 264 16 16 chr17 32646605 32646734 -52791746 + (TG)n Simple_repeat Simple_repeat 1 129 0 231 191 0 0 chr17 32646979 32647021 -52791459 + C-rich Low_complexity Low_complexity 3 44 0 393 305 136 0 chr17 32647625 32647779 -52790701 + MER91A DNA MER1_type 2 176 -20 206 171 24 0 chr17 32647828 32647869 -52790611 + MER91A DNA MER1_type 149 190 0 1861 121 29 0 chr17 32647937 32648303 -52790177 + AluSg SINE Alu 1 374 0 1767 184 26 0 chr17 32648312 32648721 -52789759 + AluJb SINE Alu 1 417 0 238 146 18 18 chr17 32648829 32648884 -52789596 + CT-rich Low_complexity Low_complexity 2 56 0 312 27 0 0 chr17 32648884 32648921 -52789559 + (CA)n Simple_repeat Simple_repeat 1 37 0 424 260 130 18 chr17 32649314 32649537 -52788943 - MIR SINE MIR -3 259 12 784 237 26 11 chr17 32649590 32649801 -52788679 - MIR SINE MIR -15 247 34 330 26 0 0 chr17 32650800 32650839 -52787641 + (CA)n Simple_repeat Simple_repeat 2 40 0 2091 119 0 0 chr17 32651482 32651777 -52786703 + AluSx SINE Alu 1 295 -17 180 326 92 31 chr17 32652323 32652421 -52786059 - MIR SINE MIR -77 131 28 1873 120 46 0 chr17 32652479 32652763 -52785717 + AluJb SINE Alu 1 297 -15 249 250 0 0 chr17 32653721 32653785 -52784695 + (CA)n Simple_repeat Simple_repeat 2 65 0 364 263 38 13 chr17 32653884 32654001 -52784479 + MIR3 SINE MIR 70 193 -15 425 329 7 7 chr17 32654058 32654201 -52784279 + MIR SINE MIR 16 158 -104 189 0 0 0 chr17 32654949 32654970 -52783510 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 186 43 0 0 chr17 32655209 32655232 -52783248 + (GA)n Simple_repeat Simple_repeat 2 24 0 220 143 12 48 chr17 32655336 32655420 -52783060 + GA-rich Low_complexity Low_complexity 1 81 0 359 294 61 31 chr17 32655950 32656113 -52782367 - MIR SINE MIR -82 180 13 329 256 8 85 chr17 32656925 32657054 -52781426 - L2 LINE L2 0 3313 3195 416 233 139 23 chr17 32657607 32657757 -52780723 + MIR SINE MIR 37 197 -65 280 268 0 14 chr17 32657940 32658011 -52780469 + MIR3 SINE MIR 107 176 -32 180 152 0 0 chr17 32658219 32658252 -52780228 + (CCA)n Simple_repeat Simple_repeat 1 33 0 1602 110 25 4 chr17 32659974 32660219 -52778261 + AluSx SINE Alu 63 312 0 2609 165 50 20 chr17 32660233 32660729 -52777751 + L1MB8 LINE L1 5668 6178 0 1099 230 36 0 chr17 32660732 32661014 -52777466 + L1MB7 LINE L1 5864 6184 0 669 130 106 0 chr17 32661014 32661137 -52777343 - MER5A DNA MER1_type -53 136 1 255 212 91 30 chr17 32662378 32662444 -52776036 + L2 LINE L2 3153 3222 -50 183 80 0 0 chr17 32662464 32662489 -52775991 + (ATG)n Simple_repeat Simple_repeat 3 27 0 424 276 5 82 chr17 32662494 32662557 -52775923 - MIR SINE MIR -10 252 186 2210 117 0 0 chr17 32662557 32662866 -52775614 - AluSg SINE Alu -1 309 1 424 276 5 82 chr17 32662866 32662998 -52775482 - MIR SINE MIR -76 186 72 197 309 65 50 chr17 32663585 32663724 -52774756 - MIR3 SINE MIR -10 198 58 195 268 71 0 chr17 32663860 32663916 -52774564 - MIR SINE MIR -97 165 106 1701 168 3 3 chr17 32664382 32664679 -52773801 + AluJb SINE Alu 1 297 -15 309 252 148 9 chr17 32664780 32664895 -52773585 + L1ME4a LINE L1 5990 6120 -1 954 205 0 0 chr17 32664903 32665069 -52773411 - FRAM SINE Alu 0 166 1 388 300 23 0 chr17 32666201 32666339 -52772141 + L1ME LINE L1 5677 5818 -303 672 162 29 6 chr17 32667224 32667397 -52771083 + CT-rich Low_complexity Low_complexity 3 179 0 989 87 0 0 chr17 32668774 32668900 -52769580 + AluSq/x SINE Alu 23 148 -165 298 256 150 15 chr17 32669316 32669449 -52769031 - MIR SINE MIR -44 218 68 320 270 16 71 chr17 32669608 32669734 -52768746 - MIR SINE MIR -60 202 84 405 314 66 15 chr17 32669784 32669921 -52768559 - MIR SINE MIR -23 239 96 232 263 0 0 chr17 32670014 32670071 -52768409 + L2 LINE L2 3207 3263 -9 332 59 20 0 chr17 32671935 32671986 -52766494 + (TC)n Simple_repeat Simple_repeat 1 52 0 520 298 162 5 chr17 32672035 32672226 -52766254 + MIR SINE MIR 35 255 -7 770 168 24 0 chr17 32672620 32672745 -52765735 + FLAM_C SINE Alu 2 129 -14 186 372 44 7 chr17 32672751 32672888 -52765592 + MIR SINE MIR 121 262 0 2059 116 23 7 chr17 32672931 32673234 -52765246 + AluSx SINE Alu 1 308 -4 253 269 65 32 chr17 32673817 32673910 -52764570 - MIR SINE MIR -55 207 112 231 295 66 57 chr17 32674034 32674156 -52764324 + MIR3 SINE MIR 5 127 -81 2116 119 10 0 chr17 32674248 32674543 -52763937 + AluSx SINE Alu 1 298 -14 2339 106 10 0 chr17 32675146 32675622 -52762858 + AluSx SINE Alu 1 479 0 206 196 18 18 chr17 32676739 32676795 -52761685 + (CAGAGA)n Simple_repeat Simple_repeat 5 60 0 2430 97 0 0 chr17 32678337 32678637 -52759843 - AluSx SINE Alu -12 300 1 280 287 29 0 chr17 32678908 32679044 -52759436 + (CA)n Simple_repeat Simple_repeat 1 140 0 296 331 69 7 chr17 32679845 32679990 -52758490 - MIR SINE MIR -89 173 20 558 258 169 31 chr17 32680267 32680593 -52757887 - L3 LINE CR1 -24 1553 1183 4859 170 18 12 chr17 32680657 32681246 -52757234 + L1MB2 LINE L1 5073 5676 -495 2291 112 20 0 chr17 32681246 32681541 -52756939 - AluSx SINE Alu -11 301 1 4859 170 18 12 chr17 32681541 32682003 -52756477 + L1MB2 LINE L1 5676 6134 -37 481 268 109 0 chr17 32682007 32682145 -52756335 + MIR SINE MIR 20 172 -90 570 225 390 22 chr17 32682298 32682654 -52755826 + L2 LINE L2 2821 3307 -6 2344 89 0 10 chr17 32683231 32683533 -52754947 + AluSx SINE Alu 1 299 -13 324 260 91 45 chr17 32683579 32683733 -52754747 - MIR SINE MIR -63 199 39 1698 128 54 37 chr17 32683909 32684206 -52754274 + AluJo SINE Alu 9 310 -2 187 352 14 0 chr17 32684714 32684785 -52753695 - L2 LINE L2 0 3313 3242 2271 86 18 0 chr17 32684900 32685213 -52753267 - AluSx SINE Alu 0 318 1 2397 82 7 0 chr17 32685252 32685545 -52752935 - AluSp SINE Alu -15 298 4 291 263 306 0 chr17 32686144 32686304 -52752176 - MIR SINE MIR -3 259 51 231 114 0 0 chr17 32686819 32686854 -52751626 + (CAT)n Simple_repeat Simple_repeat 3 37 0 738 184 17 56 chr17 32686860 32687039 -52751441 - MIR SINE MIR -3 259 88 700 280 17 34 chr17 32688073 32688312 -52750168 - MIR SINE MIR -20 242 8 1758 204 99 41 chr17 32688941 32689425 -52749055 - MLT2B1 LTR ERVL -8 512 1 328 292 34 39 chr17 32689754 32689811 -52748669 - MER5B DNA MER1_type 0 178 122 2324 109 0 3 chr17 32689811 32690114 -52748366 + AluSx SINE Alu 1 302 -10 328 292 34 39 chr17 32690114 32690234 -52748246 - MER5B DNA MER1_type -56 122 2 2588 54 0 0 chr17 32690394 32690691 -52747789 + AluY SINE Alu 1 297 -14 2075 104 11 18 chr17 32690714 32690994 -52747486 + AluSx SINE Alu 14 291 -21 308 281 180 24 chr17 32691105 32691272 -52747208 - MIR SINE MIR -13 249 57 983 184 32 5 chr17 32691299 32691489 -52746991 + MER20 DNA MER1_type 17 211 -8 421 245 101 0 chr17 32691505 32691664 -52746816 + MER5B DNA MER1_type 3 177 -1 245 135 0 0 chr17 32691978 32692015 -52746465 - MIR SINE MIR -71 191 155 1874 159 7 10 chr17 32693287 32693588 -52744892 - AluJb SINE Alu -9 303 4 1625 138 86 52 chr17 32693623 32693717 -52744763 + AluSx SINE Alu 1 90 -222 2454 84 3 3 chr17 32693717 32694025 -52744455 + AluSp SINE Alu 3 310 -3 2292 83 3 26 chr17 32694025 32694327 -52744153 + AluSx SINE Alu 3 297 -15 1625 138 86 52 chr17 32694327 32694521 -52743959 + AluSx SINE Alu 89 300 -12 369 227 55 55 chr17 32694584 32694694 -52743786 - L2 LINE L2 0 3313 3204 1849 250 176 60 chr17 32694694 32695275 -52743205 - L2 LINE L2 -252 3061 2549 197 65 32 0 chr17 32695275 32695306 -52743174 + (CAA)n Simple_repeat Simple_repeat 3 34 0 1849 250 176 60 chr17 32695306 32695462 -52743018 - L2 LINE L2 -764 2549 2413 1534 156 14 78 chr17 32695462 32695757 -52742723 + AluJo SINE Alu 1 276 -36 207 0 0 0 chr17 32695759 32695782 -52742698 + (TC)n Simple_repeat Simple_repeat 2 24 0 2363 105 0 0 chr17 32695782 32696078 -52742402 - AluSq SINE Alu -17 296 1 1849 250 176 60 chr17 32696078 32696123 -52742357 - L2 LINE L2 -900 2413 2375 2144 111 17 0 chr17 32696123 32696411 -52742069 - AluY SINE Alu -18 293 1 1849 250 176 60 chr17 32696411 32696739 -52741741 - L2 LINE L2 -938 2375 1816 496 285 130 16 chr17 32696744 32696990 -52741490 - L2 LINE L2 -1639 1675 1402 950 128 147 92 chr17 32697099 32697237 -52741243 + MER33 DNA MER1_type 2 131 -2454 1894 151 18 0 chr17 32697237 32697521 -52740959 + AluSq SINE Alu 1 289 -24 950 128 147 92 chr17 32697521 32697688 -52740792 + MER33 DNA MER1_type 131 324 0 275 330 80 0 chr17 32701505 32701605 -52736875 - MIR SINE MIR -58 150 43 225 367 37 9 chr17 32702540 32702649 -52735831 - MIR SINE MIR -80 182 71 332 264 35 0 chr17 32703905 32703992 -52734488 - MIR3 SINE MIR -5 203 114 326 220 211 9 chr17 32704309 32704418 -52734062 - L2 LINE L2 -1 3312 3182 498 240 111 65 chr17 32704421 32704476 -52734004 + MER102b DNA MER1_type 113 164 -1264 2182 94 7 20 chr17 32704476 32704773 -52733707 + AluSc SINE Alu 1 293 -16 498 240 111 65 chr17 32704773 32704934 -52733546 + MER102b DNA MER1_type 164 339 -2 225 298 0 0 chr17 32704973 32705030 -52733450 - MIR SINE MIR -131 131 75 2270 121 0 10 chr17 32705213 32705527 -52732953 + AluSx SINE Alu 1 311 -1 1848 114 76 4 chr17 32706220 32706510 -52731970 + AluSx SINE Alu 1 309 0 28 0 0 0 chr17 32709117 32709145 -52729335 + GC_rich Low_complexity Low_complexity 1 28 0 266 242 200 8 chr17 32709667 32709787 -52728693 - MIR SINE MIR 0 262 120 23 33 0 0 chr17 32711098 32711128 -52727352 + AT_rich Low_complexity Low_complexity 1 30 0 1067 113 19 25 chr17 32712178 32712338 -52726142 + AluSg/x SINE Alu 144 302 -10 2375 83 10 0 chr17 32712379 32712680 -52725800 + AluSp SINE Alu 1 304 -9 2321 101 0 0 chr17 32713041 32713328 -52725152 - AluSc SINE Alu -22 287 1 403 281 0 0 chr17 32713370 32713459 -52725021 + Tigger5 DNA MER2_type 2234 2322 -1 21 36 0 0 chr17 32713988 32714016 -52724464 + AT_rich Low_complexity Low_complexity 1 28 0 2139 138 0 0 chr17 32714016 32714305 -52724175 + AluSx SINE Alu 1 289 -23 225 337 43 0 chr17 32714371 32714463 -52724017 - MIR SINE MIR -14 248 153 2579 169 84 52 chr17 32715700 32715960 -52722520 + Charlie1a DNA MER1_type 67 317 -2444 1828 155 16 30 chr17 32715960 32716264 -52722216 - AluJo SINE Alu -8 304 5 2579 169 84 52 chr17 32716264 32716297 -52722183 + Charlie1a DNA MER1_type 317 347 -2414 2129 129 0 0 chr17 32716297 32716591 -52721889 + AluSx SINE Alu 1 294 -18 2579 169 84 52 chr17 32716591 32717172 -52721308 + Charlie1a DNA MER1_type 347 908 -1853 1904 156 0 14 chr17 32717172 32717467 -52721013 + AluSx SINE Alu 1 291 -21 2579 169 84 52 chr17 32717467 32717584 -52720896 + Charlie1a DNA MER1_type 908 1020 -1741 2522 62 0 0 chr17 32717584 32717872 -52720608 + AluSc SINE Alu 2 289 -20 2579 169 84 52 chr17 32717872 32718151 -52720329 + Charlie1a DNA MER1_type 1020 1454 -1 871 149 43 12 chr17 32718376 32718537 -52719943 - MER2 DNA MER2_type 0 345 180 1152 114 13 0 chr17 32718537 32718695 -52719785 - AluSg/x SINE Alu -16 296 137 1016 141 31 52 chr17 32718696 32718756 -52719724 - MER2 DNA MER2_type -158 187 127 1820 181 0 3 chr17 32718756 32719049 -52719431 + AluJb SINE Alu 1 292 -20 1016 141 31 52 chr17 32719049 32719179 -52719301 - MER2 DNA MER2_type -218 127 1 35 0 0 0 chr17 32719182 32719217 -52719263 + AT_rich Low_complexity Low_complexity 1 35 0 713 133 0 17 chr17 32719217 32719337 -52719143 - FLAM_C SINE Alu -15 118 1 2586 60 0 3 chr17 32719632 32719932 -52718548 - AluY SINE Alu -12 299 1 2150 136 3 0 chr17 32720002 32720297 -52718183 - AluSx SINE Alu -16 296 1 2501 76 0 16 chr17 32720423 32720737 -52717743 + AluY SINE Alu 1 309 -2 2488 93 3 0 chr17 32720894 32721206 -52717274 - AluSq SINE Alu 0 313 1 372 310 100 61 chr17 32723835 32724145 -52714335 + L2 LINE L2 2155 2476 -838 327 190 17 0 chr17 32724255 32724313 -52714167 - L1MCa LINE L1 -4362 2064 2006 252 0 0 0 chr17 32724313 32724341 -52714139 + (CA)n Simple_repeat Simple_repeat 1 28 0 2402 92 0 6 chr17 32724355 32724669 -52713811 - AluSx SINE Alu 0 312 1 2288 78 4 0 chr17 32724807 32725088 -52713392 + AluSp SINE Alu 1 282 -31 213 0 36 0 chr17 32725088 32725116 -52713364 + (CAAAA)n Simple_repeat Simple_repeat 1 80 0 2145 128 0 3 chr17 32725168 32725464 -52713016 - AluSx SINE Alu -17 295 1 2275 90 0 0 chr17 32725573 32725872 -52712608 + AluSq SINE Alu 1 299 -14 360 0 0 0 chr17 32725872 32725912 -52712568 + (TA)n Simple_repeat Simple_repeat 2 41 0 666 158 24 36 chr17 32726014 32726179 -52712301 + L1MB1 LINE L1 4974 5136 -1010 198 143 0 0 chr17 32726291 32726326 -52712154 + (CTGGGG)n Simple_repeat Simple_repeat 6 40 0 633 135 58 0 chr17 32727123 32727227 -52711253 - Tigger3(Golem) DNA MER2_type -1 3028 2919 22 0 0 0 chr17 32727228 32727250 -52711230 + AT_rich Low_complexity Low_complexity 1 22 0 481 215 0 0 chr17 32727325 32727404 -52711076 - Tigger3(Golem) DNA MER2_type -2949 80 2 711 188 57 11 chr17 32727405 32727581 -52710899 + L1MB1 LINE L1 5146 5329 -817 405 119 45 0 chr17 32727581 32727648 -52710832 + AluJ/FRAM SINE Alu 228 297 -5 3687 139 40 101 chr17 32727660 32728137 -52710343 + L1MB1 LINE L1 5316 5716 -452 2031 98 7 0 chr17 32728137 32728414 -52710066 + AluSx SINE Alu 25 303 -9 3687 139 40 101 chr17 32728414 32728820 -52709660 + L1MB1 LINE L1 5716 6145 -23 1505 157 0 19 chr17 32728826 32729088 -52709392 - AluJb SINE Alu -24 288 32 1584 144 16 77 chr17 32729464 32729653 -52708827 - AluJo SINE Alu -19 293 94 2280 80 0 6 chr17 32729653 32729966 -52708514 - AluY SINE Alu 0 311 1 1961 115 10 3 chr17 32729968 32730256 -52708224 - AluSg SINE Alu -20 290 1 1584 144 16 77 chr17 32730256 32730375 -52708105 - AluJo SINE Alu -219 93 1 329 95 0 0 chr17 32730435 32730477 -52708003 + U2 snRNA snRNA 1 42 -146 2005 128 3 0 chr17 32730497 32730787 -52707693 - AluSx SINE Alu -21 291 1 2194 109 0 10 chr17 32730797 32731108 -52707372 - AluSq SINE Alu -5 308 1 1494 186 3 35 chr17 32731113 32731430 -52707050 - AluJb SINE Alu -5 307 1 192 257 71 14 chr17 32731430 32731500 -52706980 - MIR SINE MIR -114 148 75 1822 136 31 0 chr17 32732110 32732396 -52706084 - AluSx SINE Alu -17 295 1 1976 128 3 0 chr17 32732473 32732769 -52705711 + AluSc SINE Alu 1 297 -12 2047 117 10 0 chr17 32732932 32733230 -52705250 + AluSx SINE Alu 1 301 -11 2176 103 0 0 chr17 32733302 32733594 -52704886 + AluSc SINE Alu 1 292 -17 778 163 0 22 chr17 32734506 32734641 -52703839 - FLAM_C SINE Alu 0 133 2 1634 133 6 73 chr17 32734832 32735148 -52703332 - AluJo SINE Alu -17 295 1 2214 90 0 0 chr17 32735620 32735910 -52702570 - AluSg SINE Alu -20 290 1 518 262 193 13 chr17 32736247 32736480 -52702000 + L2 LINE L2 1824 2098 -1216 29 0 0 0 chr17 32737437 32737466 -52701014 + AT_rich Low_complexity Low_complexity 1 29 0 2205 88 3 25 chr17 32737481 32737800 -52700680 + AluSx SINE Alu 1 312 0 415 257 107 34 chr17 32737872 32738226 -52700254 + L1MC5 LINE L1 7538 7917 -44 2078 113 0 0 chr17 32738229 32738542 -52699938 - AluSq SINE Alu 0 313 1 2167 101 37 0 chr17 32738542 32738840 -52699640 - AluSg SINE Alu -1 309 1 1962 134 3 7 chr17 32739056 32739362 -52699118 + AluSx SINE Alu 1 305 -7 2237 85 3 0 chr17 32739602 32739907 -52698573 + AluY SINE Alu 1 306 -5 2120 107 7 0 chr17 32740103 32740402 -52698078 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr17 32740427 32740456 -52698024 + AT_rich Low_complexity Low_complexity 1 29 0 706 211 0 15 chr17 32740976 32741109 -52697371 + FLAM_A SINE Alu 2 132 -1 248 277 0 15 chr17 32741201 32741266 -52697214 + L2 LINE L2 2483 2546 -768 785 201 0 8 chr17 32741268 32741402 -52697078 + AluJo SINE Alu 2 134 -178 1670 124 66 15 chr17 32741404 32741677 -52696803 + AluSg SINE Alu 1 287 -23 916 256 42 45 chr17 32741719 32742031 -52696449 + L2 LINE L2 2537 2847 -467 1101 255 247 29 chr17 32742058 32742200 -52696280 + L2 LINE L2 2235 2345 -968 2130 104 10 0 chr17 32742200 32742507 -52695973 - AluSx SINE Alu -2 310 1 1101 255 247 29 chr17 32742507 32742769 -52695711 + L2 LINE L2 2345 2548 -765 2024 108 3 3 chr17 32742769 32743064 -52695416 + AluSq SINE Alu 1 295 -18 1101 255 247 29 chr17 32743064 32743086 -52695394 + L2 LINE L2 2548 2564 -749 2133 104 3 3 chr17 32743086 32743393 -52695087 - AluSq SINE Alu -6 307 1 2168 98 0 0 chr17 32743397 32743693 -52694787 - AluSg SINE Alu -14 296 1 1101 255 247 29 chr17 32743693 32744020 -52694460 + L2 LINE L2 2566 3174 -139 252 0 0 0 chr17 32744744 32744772 -52693708 + (A)n Simple_repeat Simple_repeat 1 28 0 2267 90 0 10 chr17 32744790 32745100 -52693380 - AluSc SINE Alu -2 307 1 194 0 39 0 chr17 32745100 32745126 -52693354 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1687 128 76 30 chr17 32745580 32745820 -52692660 - MER2 DNA MER2_type 0 344 84 1557 195 0 7 chr17 32745820 32746112 -52692368 - AluJb SINE Alu -22 290 1 1687 128 76 30 chr17 32746112 32746199 -52692281 - MER2 DNA MER2_type -260 84 2 2106 97 6 31 chr17 32746848 32747169 -52691311 + AluSp SINE Alu 1 313 0 1957 106 64 0 chr17 32747196 32747479 -52691001 - AluSx SINE Alu -11 301 1 272 214 152 45 chr17 32747685 32747797 -52690683 - MER104 DNA Tc2 -51 129 6 2117 119 0 3 chr17 32748482 32748785 -52689695 - AluSx SINE Alu -10 302 1 182 273 61 15 chr17 32748941 32749007 -52689473 - MIR SINE MIR -3 259 191 23 0 0 0 chr17 32749153 32749176 -52689304 + AT_rich Low_complexity Low_complexity 1 23 0 1885 108 54 4 chr17 32749684 32749962 -52688518 - AluSx SINE Alu -20 292 1 2063 95 14 3 chr17 32750029 32750314 -52688166 + AluSp SINE Alu 10 297 -16 185 65 32 0 chr17 32751175 32751206 -52687274 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 2157 107 0 0 chr17 32751286 32751586 -52686894 + AluSx SINE Alu 1 300 -12 574 234 145 21 chr17 32751593 32751883 -52686597 + L1ME4a LINE L1 5572 5897 -224 2154 94 0 10 chr17 32752018 32752316 -52686164 + AluSx SINE Alu 1 295 -17 1723 153 3 7 chr17 32752568 32752862 -52685618 - AluSx SINE Alu -19 293 1 2346 99 0 0 chr17 32752886 32753199 -52685281 - AluSq SINE Alu 0 313 1 21 36 0 0 chr17 32755682 32755710 -52682770 + GC_rich Low_complexity Low_complexity 1 28 0 269 229 0 21 chr17 32755801 32755897 -52682583 + (CCG)n Simple_repeat Simple_repeat 2 95 0 201 39 0 0 chr17 32756107 32756133 -52682347 + (CCCG)n Simple_repeat Simple_repeat 3 28 0 21 0 0 0 chr17 32756248 32756269 -52682211 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 32756643 32756673 -52681807 + GC_rich Low_complexity Low_complexity 1 30 0 2222 81 0 7 chr17 32757597 32757895 -52680585 + AluSq SINE Alu 1 296 -17 2022 94 14 0 chr17 32758071 32758358 -52680122 + AluSx SINE Alu 1 291 -21 1586 119 0 0 chr17 32758508 32758744 -52679736 + AluSq SINE Alu 1 236 -77 2434 48 0 0 chr17 32758811 32759106 -52679374 - AluY SINE Alu -16 295 1 210 71 0 0 chr17 32759483 32759511 -52678969 + (CTAAT)n Simple_repeat Simple_repeat 3 30 0 201 103 51 0 chr17 32759511 32759550 -52678930 + (CAATA)n Simple_repeat Simple_repeat 5 45 0 1494 58 11 0 chr17 32760279 32760470 -52678010 + AluY SINE Alu 1 193 -118 428 102 0 0 chr17 32760470 32760529 -52677951 + AluY SINE Alu 234 292 -18 2140 114 3 0 chr17 32760854 32761151 -52677329 + AluSx SINE Alu 1 298 -14 592 111 111 0 chr17 32761191 32761281 -52677199 + AluJb SINE Alu 19 118 -194 231 257 95 27 chr17 32761737 32761811 -52676669 + L2 LINE L2 3134 3212 -60 874 127 16 0 chr17 32761906 32762032 -52676448 - FLAM_C SINE Alu -5 128 1 25 51 0 0 chr17 32762074 32762113 -52676367 + AT_rich Low_complexity Low_complexity 1 39 0 1851 118 7 4 chr17 32762402 32762672 -52675808 + AluSx SINE Alu 23 293 -19 2139 93 36 0 chr17 32764593 32764894 -52673586 + AluSx SINE Alu 1 312 0 1112 141 180 12 chr17 32765497 32765753 -52672727 + AluJb SINE Alu 2 300 -2 292 261 33 22 chr17 32767457 32767549 -52670931 - MIR SINE MIR -51 211 119 414 277 80 15 chr17 32768200 32768337 -52670143 - MIR SINE MIR -65 197 52 225 299 30 0 chr17 32769027 32769094 -52669386 - L3b LINE CR1 -190 1393 1325 353 303 42 8 chr17 32769202 32769321 -52669159 - L2 LINE L2 -215 3057 2935 193 253 141 40 chr17 32769524 32769623 -52668857 - L2 LINE L2 -19 3253 3145 243 159 130 0 chr17 32769934 32770003 -52668477 + L1ME4a LINE L1 5999 6076 -45 2291 82 0 3 chr17 32770003 32770306 -52668174 - AluY SINE Alu -9 302 1 781 129 21 57 chr17 32770322 32770462 -52668018 - AluSq/x SINE Alu -177 136 2 2151 125 0 0 chr17 32770498 32770802 -52667678 + AluSx SINE Alu 1 304 -8 1234 39 7 0 chr17 32770812 32770966 -52667514 + AluY SINE Alu 150 304 -7 237 125 100 0 chr17 32771056 32771096 -52667384 - MIR SINE MIR -93 169 126 945 176 31 11 chr17 32771109 32771337 -52667143 - AluJo SINE Alu -26 286 2 860 191 0 0 chr17 32771343 32771495 -52666985 - FRAM SINE Alu -4 172 21 447 307 16 8 chr17 32771498 32771625 -52666855 - MIR SINE MIR -127 135 8 933 180 0 0 chr17 32772103 32772264 -52666216 + FRAM SINE Alu 10 170 -6 736 279 88 9 chr17 32772599 32772825 -52665655 - MIR SINE MIR -10 252 9 2219 92 0 10 chr17 32772885 32773191 -52665289 - AluY SINE Alu -8 303 1 1848 140 48 0 chr17 32774226 32774519 -52663961 - AluSp SINE Alu -6 307 1 2055 118 0 0 chr17 32774522 32774811 -52663669 - AluSx SINE Alu -22 290 2 189 284 49 49 chr17 32775515 32775596 -52662884 + L2 LINE L2 3187 3267 -5 362 184 26 13 chr17 32775635 32775711 -52662769 + MIR SINE MIR 72 148 -114 251 278 35 78 chr17 32776343 32776458 -52662022 + MIR SINE MIR 25 134 -74 349 333 7 52 chr17 32776542 32776695 -52661785 + MIR SINE MIR 97 242 -20 1926 227 124 98 chr17 32777416 32778204 -52660276 - HAL1 LINE L1 -1 2506 1740 2033 130 19 29 chr17 32778204 32778380 -52660100 - AluSq SINE Alu -1 312 139 2562 71 3 0 chr17 32778380 32778690 -52659790 - AluY SINE Alu 0 311 1 2033 130 19 29 chr17 32778690 32778828 -52659652 - AluSq SINE Alu -174 139 1 1926 227 124 98 chr17 32778828 32778882 -52659598 - HAL1 LINE L1 -767 1740 1689 2358 75 7 13 chr17 32778882 32779188 -52659292 - AluSg1 SINE Alu -5 304 1 1926 227 124 98 chr17 32779188 32779358 -52659122 - HAL1 LINE L1 -818 1689 1525 2429 101 7 0 chr17 32779358 32779665 -52658815 - AluSc SINE Alu 0 309 1 1926 227 124 98 chr17 32779665 32780051 -52658429 - HAL1 LINE L1 -982 1525 1070 402 261 127 37 chr17 32780062 32780307 -52658173 - HAL1 LINE L1 -1596 911 645 281 276 123 0 chr17 32780306 32780469 -52658011 + L1ME LINE L1 1380 1562 -5072 * 1797 129 82 111 chr17 32780507 32780947 -52657533 - Tigger2a DNA MER2_type -7 427 1 1047 247 112 31 chr17 32780953 32781140 -52657340 + L1ME LINE L1 1526 1697 -5128 1785 141 87 4 chr17 32781140 32781416 -52657064 + AluSq SINE Alu 1 299 -14 1047 247 112 31 chr17 32781416 32781820 -52656660 + L1ME LINE L1 1697 2318 -4507 463 186 83 7 chr17 32781827 32781972 -52656508 + L1ME LINE L1 2546 2701 -4124 636 265 121 0 chr17 32781978 32782227 -52656253 + L1ME LINE L1 2761 3039 -3605 999 160 47 12 chr17 32782227 32782396 -52656084 + AluJb SINE Alu 1 175 -137 632 189 14 0 chr17 32782435 32782583 -52655897 + L1ME LINE L1 3260 3409 -3235 195 42 0 0 chr17 32782603 32782627 -52655853 + (TCTA)n Simple_repeat Simple_repeat 2 25 0 344 213 149 0 chr17 32782630 32782724 -52655756 - L1MEc LINE L1 -4154 2242 2135 439 228 32 14 chr17 32782788 32782913 -52655567 + L1MC4 LINE L1 6603 6703 -1339 1813 109 33 88 chr17 32783014 32783344 -52655136 - AluSx SINE Alu 0 312 1 2093 119 10 3 chr17 32783430 32783725 -52654755 - AluSq SINE Alu -15 298 2 589 207 26 0 chr17 32783726 32783842 -52654638 - MLT1A2 LTR MaLR -255 119 1 1402 237 115 22 chr17 32783842 32783976 -52654504 + L1ME LINE L1 3565 3685 -2959 2246 106 10 0 chr17 32783976 32784278 -52654202 + AluSx SINE Alu 3 307 -5 1402 237 115 22 chr17 32784278 32784640 -52653840 + L1ME LINE L1 3685 4107 -2537 361 212 13 99 chr17 32784656 32784807 -52653673 + L1ME LINE L1 4731 4868 -1776 271 318 109 35 chr17 32784847 32784866 -52653614 + MIR SINE MIR 18 34 -228 2081 128 10 3 chr17 32784866 32785155 -52653325 + AluSg SINE Alu 1 291 -19 271 318 109 35 chr17 32785155 32785336 -52653144 + MIR SINE MIR 34 233 -29 185 181 389 0 chr17 32785331 32785403 -52653077 - MIR3 SINE MIR -22 186 87 * 183 322 98 35 chr17 32785909 32786052 -52652428 - MIR3 SINE MIR -26 182 31 227 261 162 21 chr17 32786089 32786231 -52652249 - L3b LINE CR1 -130 1453 1292 188 349 16 16 chr17 32787281 32787344 -52651136 + L2 LINE L2 3124 3186 -86 316 245 156 6 chr17 32788455 32788608 -52649872 - MIR SINE MIR -68 140 18 2157 137 7 0 chr17 32789118 32789295 -52649185 - AluSq SINE Alu -5 308 127 405 0 0 0 chr17 32789295 32789340 -52649140 + (TG)n Simple_repeat Simple_repeat 2 46 0 2157 137 7 0 chr17 32789340 32789468 -52649012 - AluSq SINE Alu -186 127 1 307 308 37 0 chr17 32789842 32789949 -52648531 + MIR SINE MIR 118 228 -34 325 270 68 61 chr17 32790311 32790474 -52648006 - MIR SINE MIR -71 191 28 200 280 120 50 chr17 32790415 32790515 -52647965 + MIR SINE MIR 25 131 -77 * 1731 182 35 0 chr17 32792811 32793097 -52645383 + AluJo SINE Alu 6 301 -11 373 65 65 0 chr17 32793843 32793905 -52644575 - L1MA7 LINE L1 0 6291 6226 407 325 83 0 chr17 32795130 32795287 -52643193 - L2 LINE L2 -13 3300 3131 376 321 145 0 chr17 32796394 32796525 -52641955 + MER91A DNA MER1_type 1 150 -46 2430 107 0 10 chr17 32796596 32796906 -52641574 - AluSx SINE Alu -5 307 1 246 315 103 12 chr17 32797171 32797336 -52641144 + L3 LINE CR1 1385 1564 -13 344 338 104 9 chr17 32797784 32798015 -52640465 - L2 LINE L2 -1415 1899 1647 513 322 166 14 chr17 32798459 32798969 -52639511 - L2 LINE L2 -2 3270 2686 31 26 0 0 chr17 32799763 32799801 -52638679 + AT_rich Low_complexity Low_complexity 1 38 0 230 256 149 36 chr17 32801081 32801249 -52637231 + L1ME LINE L1 5653 5839 -282 2032 162 3 0 chr17 32801376 32801679 -52636801 + AluSx SINE Alu 1 304 -8 1067 107 53 91 chr17 32801682 32801869 -52636611 + AluJb SINE Alu 132 311 -1 500 256 44 19 chr17 32802494 32802654 -52635826 + MIR SINE MIR 30 193 -69 356 231 44 0 chr17 32802662 32802753 -52635727 + L1MB7 LINE L1 6085 6179 -5 335 148 98 0 chr17 32803537 32803598 -52634882 - MER5A DNA MER1_type -119 70 4 2246 112 0 0 chr17 32803645 32803940 -52634540 + AluSx SINE Alu 1 295 -17 1802 101 122 35 chr17 32804195 32804482 -52633998 - AluSx SINE Alu 0 312 1 349 301 108 34 chr17 32804585 32804762 -52633718 + MIR SINE MIR 6 191 -63 775 179 0 0 chr17 32806405 32806528 -52631952 + FLAM_C SINE Alu 1 123 -20 294 347 63 42 chr17 32807204 32807394 -52631086 - L2 LINE L2 -181 3091 2898 1700 158 8 4 chr17 32809083 32809348 -52629132 + AluJo SINE Alu 1 266 -46 410 324 63 39 chr17 32809490 32809697 -52628783 - MIR SINE MIR -28 234 23 1598 179 90 0 chr17 32809923 32810202 -52628278 + AluJo SINE Alu 1 304 -8 498 176 0 11 chr17 32810207 32810298 -52628182 + 5S rRNA rRNA 1 90 -31 1748 175 29 29 chr17 32810405 32810713 -52627767 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr17 32810746 32810767 -52627713 + AT_rich Low_complexity Low_complexity 1 21 0 5287 147 42 15 chr17 32810814 32811610 -52626870 + L1MA5 LINE L1 4518 5291 -1009 2195 108 30 0 chr17 32811610 32811905 -52626575 + AluSq SINE Alu 1 304 -9 5287 147 42 15 chr17 32811905 32812840 -52625640 + L1MA5 LINE L1 5291 6299 -1 2277 119 0 0 chr17 32812958 32813268 -52625212 - AluSx SINE Alu -2 310 1 1988 105 35 0 chr17 32813418 32813704 -52624776 - AluJb SINE Alu -12 300 5 2411 70 10 0 chr17 32813718 32814018 -52624462 - AluSx SINE Alu -9 303 1 228 200 33 0 chr17 32814638 32814698 -52623782 + (CCCG)n Simple_repeat Simple_repeat 3 64 0 534 132 70 18 chr17 32815520 32815634 -52622846 - MER96 DNA MER1_type? -50 125 6 297 295 98 16 chr17 32815977 32816099 -52622381 + MIR SINE MIR 51 182 -80 994 166 0 25 chr17 32816567 32816730 -52621750 + FRAM SINE Alu 1 158 -18 2124 141 0 3 chr17 32816734 32817038 -52621442 + AluSx SINE Alu 1 303 -9 1885 164 0 10 chr17 32817062 32817373 -52621107 + AluJb SINE Alu 3 310 -2 2411 61 3 3 chr17 32817602 32817895 -52620585 + AluSc SINE Alu 1 293 -16 841 251 151 60 chr17 32819635 32819840 -52618640 + L1ME1 LINE L1 1619 1804 -4592 2492 87 0 3 chr17 32819840 32820152 -52618328 - AluSx SINE Alu -1 311 1 841 251 151 60 chr17 32820152 32820533 -52617947 + L1ME1 LINE L1 1804 2270 -4126 2264 115 3 0 chr17 32820533 32820838 -52617642 + AluSx SINE Alu 2 307 -5 841 251 151 60 chr17 32820838 32820887 -52617593 + L1ME1 LINE L1 2270 2313 -4083 1042 121 7 0 chr17 32820888 32821029 -52617451 - AluSq/x SINE Alu -170 142 1 1067 205 58 85 chr17 32821029 32821317 -52617163 + L1ME1 LINE L1 2667 2942 -3273 676 209 0 8 chr17 32821317 32821446 -52617034 + FLAM_A SINE Alu 1 128 -5 1067 205 58 85 chr17 32821446 32821557 -52616923 + L1ME1 LINE L1 2942 3055 -3160 953 191 59 15 chr17 32821583 32821787 -52616693 + MER20 DNA MER1_type 1 213 -6 502 206 137 5 chr17 32821794 32821998 -52616482 + L1ME1 LINE L1 3100 3330 -2885 895 235 22 15 chr17 32822009 32822162 -52616318 + L1ME1 LINE L1 4574 4731 -1484 2100 124 3 3 chr17 32822162 32822461 -52616019 + AluSg SINE Alu 4 302 -8 895 235 22 15 chr17 32822461 32822575 -52615905 + L1ME1 LINE L1 4731 4843 -1372 2056 140 7 0 chr17 32822630 32822930 -52615550 + AluSx SINE Alu 1 302 -10 457 202 53 0 chr17 32822930 32823024 -52615456 - FLAM_A SINE Alu -27 115 17 397 237 88 0 chr17 32823024 32823138 -52615342 + L1ME1 LINE L1 4833 4956 -1259 956 163 0 67 chr17 32823143 32823321 -52615159 + AluJo SINE Alu 115 280 -32 2888 207 41 42 chr17 32823346 32824231 -52614249 + L1ME1 LINE L1 5041 6015 -220 2452 88 0 0 chr17 32824231 32824527 -52613953 + AluSc SINE Alu 1 296 -13 2888 207 41 42 chr17 32824527 32824644 -52613836 + L1ME1 LINE L1 6015 6131 -104 1750 189 89 124 chr17 32825173 32825945 -52612535 + LTR1B LTR ERV1 1 745 -81 452 275 15 12 chr17 32826010 32826144 -52612336 + LTR28 LTR ERV1 688 1019 -1 15371 164 30 27 chr17 32826279 32827215 -52611265 + HUERS-P2 LTR ERV1 75 1007 -3465 2160 115 3 0 chr17 32827215 32827510 -52610970 - AluSg SINE Alu -14 296 1 15371 164 30 27 chr17 32827510 32830404 -52608076 + HUERS-P2 LTR ERV1 1007 4055 -417 5711 108 16 16 chr17 32830403 32831197 -52607283 + LTR1B-int LTR ERV1 5808 6601 -490 * 2221 155 11 3 chr17 32831195 32831549 -52606931 + LTR1B-int LTR ERV1 6734 7090 -1 * 1720 184 83 136 chr17 32831551 32832338 -52606142 + LTR1B LTR ERV1 1 745 -81 419 266 68 38 chr17 32832392 32832526 -52605954 + LTR28 LTR ERV1 688 1019 -1 221 231 77 0 chr17 32832600 32832665 -52605815 + MIR SINE MIR 23 92 -170 420 223 0 0 chr17 32833061 32833155 -52605325 - AluS SINE Alu -218 95 2 2309 91 10 3 chr17 32833305 32833612 -52604868 + AluSx SINE Alu 1 309 -3 2415 69 3 0 chr17 32834199 32834502 -52603978 - AluY SINE Alu -7 304 1 4635 45 2 10 chr17 32834635 32835214 -52603266 - L1PA8 LINE L1 -1 6171 5598 2463 84 27 7 chr17 32835486 32835930 -52602550 - L1PA8 LINE L1 -561 5593 5148 386 349 74 0 chr17 32836254 32836403 -52602077 - L2 LINE L2 0 3272 3113 2376 79 7 0 chr17 32837032 32837335 -52601145 - AluSg SINE Alu -5 305 1 2320 212 29 31 chr17 32837347 32837594 -52600886 - L1 LINE L1 -1127 5019 4773 2425 95 0 0 chr17 32837594 32837900 -52600580 - AluSp SINE Alu -6 307 2 2320 212 29 31 chr17 32837900 32838241 -52600239 - L1 LINE L1 -1373 4773 4432 1914 83 4 0 chr17 32838265 32838505 -52599975 - AluSp SINE Alu -10 303 63 284 95 0 0 chr17 32838505 32838547 -52599933 - L1M4c LINE L1 -6326 58 17 * 1026 196 129 81 chr17 32838546 32838691 -52599789 - L1MD1 LINE L1 -197 6045 5909 1864 129 39 4 chr17 32838691 32838971 -52599509 + AluSx SINE Alu 1 290 -22 1026 196 129 81 chr17 32838971 32839231 -52599249 - L1MD1 LINE L1 -333 5909 5433 976 189 136 45 chr17 32839233 32839501 -52598979 - AluJo SINE Alu 0 310 21 402 165 53 83 chr17 32839509 32839595 -52598885 - L1MD1 LINE L1 -797 5445 5363 687 160 0 0 chr17 32839595 32839701 -52598779 - U6 snRNA snRNA 0 107 2 402 165 53 83 chr17 32839701 32839747 -52598733 - L1MD1 LINE L1 -879 5363 5317 1399 108 10 21 chr17 32839765 32839959 -52598521 + AluSg/x SINE Alu 106 297 -13 1021 288 40 21 chr17 32839959 32840428 -52598052 - L1M4 LINE L1 -3464 2682 2205 2069 145 0 3 chr17 32840429 32840739 -52597741 - AluSg SINE Alu -1 309 1 2023 155 0 0 chr17 32840739 32841042 -52597438 - AluJo SINE Alu -9 303 1 1065 130 16 22 chr17 32841082 32841267 -52597213 - AluSg/x SINE Alu -7 303 120 746 154 16 0 chr17 32841368 32841491 -52596989 - AluSx SINE Alu -150 162 38 2264 102 3 10 chr17 32841502 32841806 -52596674 + AluSp SINE Alu 1 302 -11 1006 252 76 53 chr17 32841922 32842001 -52596479 + L1MDa LINE L1 2404 2480 -4060 2114 139 7 0 chr17 32842001 32842302 -52596178 + AluSx SINE Alu 6 308 -4 1006 252 76 53 chr17 32842302 32842373 -52596107 + L1MDa LINE L1 2480 2548 -3992 1975 136 9 28 chr17 32842373 32842690 -52595790 + AluSx SINE Alu 1 311 -1 1006 252 76 53 chr17 32842690 32842724 -52595756 + L1MDa LINE L1 2548 2580 -3960 2006 156 0 0 chr17 32842724 32843025 -52595455 + AluJo SINE Alu 1 301 -11 2063 145 0 3 chr17 32843025 32843335 -52595145 + AluSg SINE Alu 1 309 -1 1006 252 76 53 chr17 32843335 32843806 -52594674 + L1MDa LINE L1 2579 3076 -3464 1385 113 10 21 chr17 32843806 32844000 -52594480 - AluSg/x SINE Alu -13 297 106 402 165 53 83 chr17 32844018 32844064 -52594416 + L1MD1 LINE L1 5317 5363 -879 687 160 0 0 chr17 32844064 32844170 -52594310 + U6 snRNA snRNA 2 107 0 402 165 53 83 chr17 32844170 32844256 -52594224 + L1MD1 LINE L1 5363 5445 -797 977 189 136 45 chr17 32844264 32844535 -52593945 + AluJo SINE Alu 21 313 0 1051 197 132 62 chr17 32844537 32844783 -52593697 + L1MD1 LINE L1 5433 5660 -582 198 0 0 0 chr17 32844783 32844805 -52593675 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1788 128 45 0 chr17 32844810 32845076 -52593404 - AluSx SINE Alu -34 278 1 1051 197 132 62 chr17 32845076 32845221 -52593259 + L1MD1 LINE L1 5663 6045 -197 284 95 0 0 chr17 32845220 32845262 -52593218 + L1M4c LINE L1 17 58 -6326 * 1941 85 4 0 chr17 32845262 32845508 -52592972 + AluSp SINE Alu 63 309 -4 2354 209 29 31 chr17 32845531 32845872 -52592608 + L1 LINE L1 4432 4773 -1373 2378 105 0 0 chr17 32845872 32846178 -52592302 + AluSp SINE Alu 2 307 -6 2354 209 29 31 chr17 32846178 32846425 -52592055 + L1 LINE L1 4773 5019 -1127 2848 3 0 0 chr17 32846437 32846737 -52591743 + AluYa5 SINE Alu 1 300 -11 2192 99 0 3 chr17 32846749 32847064 -52591416 + AluY SINE Alu 1 314 0 2208 106 10 0 chr17 32847317 32847619 -52590861 + AluSg SINE Alu 1 305 -5 386 349 74 0 chr17 32848248 32848397 -52590083 + L2 LINE L2 3113 3272 0 2468 84 27 7 chr17 32848721 32849165 -52589315 + L1PA8 LINE L1 5148 5593 -561 4492 55 2 12 chr17 32849437 32850017 -52588463 + L1PA8 LINE L1 5598 6171 -1 2087 129 3 3 chr17 32850150 32850461 -52588019 + AluY SINE Alu 1 311 0 252 0 0 0 chr17 32851048 32851076 -52587404 + (T)n Simple_repeat Simple_repeat 1 28 0 481 182 83 55 chr17 32851728 32851909 -52586571 + MER53 DNA DNA 3 188 -1 343 321 89 21 chr17 32852062 32852252 -52586228 + L2 LINE L2 1462 1664 -1650 231 175 0 0 chr17 32853555 32853612 -52584868 + (TG)n Simple_repeat Simple_repeat 1 57 0 482 305 83 36 chr17 32854259 32854561 -52583919 - LTR40b LTR ERVL -2 460 145 2540 214 90 84 chr17 32854678 32854819 -52583661 - L1MD3 LINE L1 -5 8037 7898 225 0 0 0 chr17 32854819 32854844 -52583636 + (TC)n Simple_repeat Simple_repeat 2 26 0 2540 214 90 84 chr17 32854844 32855727 -52582753 - L1MD3 LINE L1 -144 7898 7024 2107 120 3 10 chr17 32855851 32856151 -52582329 - AluSc SINE Alu -11 298 1 2135 98 7 11 chr17 32856154 32856477 -52582003 - AluSx SINE Alu 0 322 1 2057 116 3 10 chr17 32856482 32856774 -52581706 - AluSc SINE Alu -19 290 1 2366 97 0 0 chr17 32856775 32857075 -52581405 - AluSg SINE Alu -10 300 1 1384 81 0 6 chr17 32857253 32857425 -52581055 - AluSq SINE Alu -142 171 1 2155 139 3 0 chr17 32857494 32857804 -52580676 - AluSx SINE Alu -1 311 1 2443 69 7 0 chr17 32858043 32858347 -52580133 + AluY SINE Alu 1 306 -5 1936 130 4 0 chr17 32858458 32858727 -52579753 + AluSx SINE Alu 9 278 -34 28 61 0 0 chr17 32858944 32858993 -52579487 + AT_rich Low_complexity Low_complexity 1 49 0 797 168 8 0 chr17 32858998 32859129 -52579351 - FLAM_C SINE Alu -1 132 1 2310 100 0 3 chr17 32859160 32859461 -52579019 + AluSq SINE Alu 1 300 -13 2249 113 0 7 chr17 32859473 32859783 -52578697 + AluSp SINE Alu 6 313 0 2233 99 7 10 chr17 32860029 32860332 -52578148 + AluSc SINE Alu 1 302 -7 673 149 0 9 chr17 32860591 32860698 -52577782 - L1PB3 LINE L1 -48 6106 6001 2253 119 3 3 chr17 32860935 32861247 -52577233 - AluSx SINE Alu 0 312 1 2219 89 25 0 chr17 32861455 32861735 -52576745 - AluSg SINE Alu -23 287 1 273 286 0 36 chr17 32861790 32861874 -52576606 - MIR SINE MIR -98 110 30 2312 109 0 0 chr17 32863034 32863336 -52575144 - AluSg SINE Alu -8 302 1 2487 68 0 3 chr17 32863342 32863638 -52574842 - AluSc SINE Alu -14 295 1 1711 170 3 7 chr17 32863795 32864078 -52574402 + AluJo SINE Alu 1 282 -30 2195 134 0 0 chr17 32864461 32864766 -52573714 - AluSx SINE Alu -7 305 1 2327 89 7 0 chr17 32864870 32865174 -52573306 - AluY SINE Alu -5 306 1 2138 60 4 23 chr17 32865514 32865779 -52572701 - AluSp SINE Alu -24 289 30 920 71 0 9 chr17 32865800 32865912 -52572568 - AluY SINE Alu -179 132 22 1563 180 9 75 chr17 32865921 32866107 -52572373 - AluJb SINE Alu 0 312 156 2115 142 3 0 chr17 32866107 32866418 -52572062 - AluSx SINE Alu 0 312 1 1563 180 9 75 chr17 32866418 32866565 -52571915 - AluJb SINE Alu -156 156 1 354 146 0 0 chr17 32866566 32866621 -52571859 - MER53 DNA DNA -134 55 1 2103 91 7 46 chr17 32866642 32866811 -52571669 - AluSq SINE Alu -18 295 142 2480 71 0 0 chr17 32866811 32867105 -52571375 - AluSq SINE Alu -19 294 1 2103 91 7 46 chr17 32867105 32867242 -52571238 - AluSq SINE Alu -171 142 1 2325 88 0 44 chr17 32867252 32867424 -52571056 - AluSq SINE Alu -8 305 152 2119 93 0 59 chr17 32867424 32867745 -52570735 - AluY SINE Alu -9 302 1 2325 88 0 44 chr17 32867745 32867889 -52570591 - AluSq SINE Alu -161 152 3 2190 93 0 55 chr17 32868474 32868618 -52569862 + AluSx SINE Alu 4 123 -189 2238 97 10 0 chr17 32868618 32868908 -52569572 + AluY SINE Alu 1 293 -18 2190 93 0 55 chr17 32868908 32869075 -52569405 + AluSx SINE Alu 123 298 -14 2022 95 0 89 chr17 32869082 32869398 -52569082 + AluSg SINE Alu 1 288 -22 710 162 17 0 chr17 32869505 32869622 -52568858 - FLAM_A SINE Alu -13 129 11 323 224 15 8 chr17 32870017 32870118 -52568362 + MIR3 SINE MIR 106 207 -1 618 258 0 0 chr17 32870208 32870340 -52568140 + FLAM_C SINE Alu 2 133 -10 2143 96 7 7 chr17 32870531 32870822 -52567658 - AluSg SINE Alu -19 291 1 1364 108 6 0 chr17 32871094 32871270 -52567210 + AluSx SINE Alu 1 177 -135 1452 41 0 6 chr17 32871370 32871539 -52566941 - AluY SINE Alu -142 169 2 522 158 30 0 chr17 32871570 32871671 -52566809 - MER53 DNA DNA -69 120 17 1499 183 29 15 chr17 32872997 32873271 -52565209 + AluJb SINE Alu 1 278 -34 2168 93 4 4 chr17 32873764 32874043 -52564437 + AluSp SINE Alu 1 279 -34 2029 96 53 0 chr17 32875085 32875367 -52563113 + AluSx SINE Alu 2 298 -14 2285 109 0 7 chr17 32876501 32876803 -52561677 - AluSx SINE Alu -12 300 1 556 93 0 75 chr17 32876959 32877066 -52561414 + AluSg/x SINE Alu 214 312 0 602 325 112 13 chr17 32877066 32877215 -52561265 + L3 LINE CR1 1103 1236 -341 334 211 26 0 chr17 32877215 32877291 -52561189 + MER116 DNA Mariner 3 80 0 602 325 112 13 chr17 32877291 32877525 -52560955 + L3 LINE CR1 1236 1524 -53 38 0 0 20 chr17 32877676 32877688 -52560792 + AT_rich Low_complexity Low_complexity 1 12 -36 2339 104 0 0 chr17 32877688 32877996 -52560484 - AluSc SINE Alu -1 308 1 38 0 0 20 chr17 32877996 32878032 -52560448 + AT_rich Low_complexity Low_complexity 12 48 0 2228 93 3 3 chr17 32878032 32878321 -52560159 - AluSc SINE Alu -20 289 1 275 293 61 27 chr17 32878484 32878631 -52559849 + L2 LINE L2 3160 3311 -2 22 80 0 0 chr17 32878672 32878722 -52559758 + AT_rich Low_complexity Low_complexity 1 50 0 357 216 128 8 chr17 32878724 32878849 -52559631 + MER112 DNA MER1_type 119 258 -2 1361 140 14 27 chr17 32879081 32879302 -52559178 + AluJb SINE Alu 85 302 -10 710 197 15 8 chr17 32879316 32879448 -52559032 + FLAM_A SINE Alu 1 133 0 2013 97 6 84 chr17 32879471 32879791 -52558689 + AluSx SINE Alu 1 295 -17 2300 100 0 0 chr17 32880302 32880601 -52557879 - AluSx SINE Alu -13 299 1 1976 135 32 0 chr17 32880613 32880894 -52557586 - AluSx SINE Alu -22 290 1 268 309 22 73 chr17 32881268 32881404 -52557076 + MIR3 SINE MIR 8 136 -72 2419 72 13 3 chr17 32882675 32882979 -52555501 + AluSp SINE Alu 1 307 -6 652 26 0 0 chr17 32882981 32883058 -52555422 - AluY SINE Alu -24 287 211 460 297 8 0 chr17 32883407 32883525 -52554955 + MIR SINE MIR 10 128 -134 1111 121 0 6 chr17 32883606 32883771 -52554709 - AluSc SINE Alu -11 298 135 2349 62 31 0 chr17 32883818 32884108 -52554372 - AluSx SINE Alu -13 299 1 1530 175 49 3 chr17 32885115 32885400 -52553080 + AluJb SINE Alu 1 298 -14 2102 93 44 0 chr17 32886192 32886486 -52551994 - AluSg SINE Alu 0 306 1 2252 84 17 27 chr17 32887039 32887338 -52551142 - AluSp SINE Alu -17 296 1 243 0 0 0 chr17 32887339 32887366 -52551114 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1943 73 4 0 chr17 32887382 32887614 -52550866 - AluSc SINE Alu -76 233 1 938 130 0 27 chr17 32887616 32887762 -52550718 - AluJo SINE Alu -170 142 1 366 93 0 19 chr17 32887801 32887855 -52550625 - MER66A LTR ERV1 -139 339 287 185 295 268 9 chr17 32888044 32888156 -52550324 + L2 LINE L2 2886 3026 -287 2051 143 0 0 chr17 32888159 32888452 -52550028 - AluJb SINE Alu -13 299 7 2458 46 0 39 chr17 32888468 32888774 -52549706 - AluY SINE Alu -17 294 1 602 148 0 10 chr17 32888776 32888877 -52549603 - FLAM_C SINE Alu -6 137 38 2307 107 3 0 chr17 32889312 32889620 -52548860 - AluSp SINE Alu -4 309 1 2447 90 0 3 chr17 32889906 32890216 -52548264 + AluSp SINE Alu 1 309 -4 2388 57 0 0 chr17 32890657 32890964 -52547516 + AluY SINE Alu 1 307 0 729 232 81 10 chr17 32891017 32891183 -52547297 + MIR SINE MIR 41 225 -37 2384 92 0 16 chr17 32891183 32891498 -52546982 + AluSq SINE Alu 1 310 -3 729 232 81 10 chr17 32891498 32891529 -52546951 + MIR SINE MIR 225 252 -10 21 0 0 0 chr17 32891538 32891559 -52546921 + AT_rich Low_complexity Low_complexity 1 21 0 1089 88 0 0 chr17 32891560 32891696 -52546784 + AluSq SINE Alu 1 136 -176 282 184 0 0 chr17 32891696 32891772 -52546708 + A-rich Low_complexity Low_complexity 1 76 0 1355 96 6 0 chr17 32891772 32891950 -52546530 + AluSq SINE Alu 118 296 -17 22 39 0 39 chr17 32891986 32892008 -52546472 + AT_rich Low_complexity Low_complexity 1 22 -27 2160 120 3 0 chr17 32892008 32892300 -52546180 + AluSx SINE Alu 1 293 -19 22 39 0 39 chr17 32892300 32892328 -52546152 + AT_rich Low_complexity Low_complexity 22 49 0 1602 145 50 31 chr17 32892478 32892625 -52545855 + MER33 DNA MER1_type 2 145 -2440 2367 86 0 13 chr17 32892625 32892928 -52545552 - AluSq SINE Alu -14 299 1 1602 145 50 31 chr17 32892928 32893097 -52545383 + MER33 DNA MER1_type 145 324 0 956 146 32 25 chr17 32893235 32893393 -52545087 - AluJb SINE Alu -16 296 138 2321 92 7 0 chr17 32893401 32893693 -52544787 - AluSg SINE Alu -16 294 1 267 79 0 0 chr17 32893728 32893766 -52544714 + (TA)n Simple_repeat Simple_repeat 1 38 0 2293 62 0 21 chr17 32893903 32894222 -52544258 - AluSg SINE Alu 0 313 1 2734 30 0 0 chr17 32894331 32894635 -52543845 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 32894970 32894991 -52543489 + GC_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr17 32895038 32895068 -52543412 + GC_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 32895118 32895150 -52543330 + (TCCCC)n Simple_repeat Simple_repeat 1 32 0 217 228 11 43 chr17 32895298 32895390 -52543090 + CT-rich Low_complexity Low_complexity 1 89 0 510 119 0 0 chr17 32895690 32895774 -52542706 + (CTGGGG)n Simple_repeat Simple_repeat 6 89 0 2331 70 16 29 chr17 32896355 32896670 -52541810 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr17 32897771 32897797 -52540683 + AT_rich Low_complexity Low_complexity 1 26 0 2137 77 42 11 chr17 32898077 32898364 -52540116 - AluYa5 SINE Alu -14 297 2 5705 33 0 11 chr17 32898381 32899018 -52539462 - SVA Other Other 0 1386 757 1991 123 6 35 chr17 32899187 32899504 -52538976 - AluSc SINE Alu -1 308 1 237 65 0 0 chr17 32899749 32899780 -52538700 + (T)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr17 32899889 32899910 -52538570 + (TG)n Simple_repeat Simple_repeat 1 21 0 2379 108 0 0 chr17 32899963 32900269 -52538211 - AluSg SINE Alu -4 306 1 2099 105 6 54 chr17 32900554 32900869 -52537611 - AluSq SINE Alu -13 300 1 401 309 56 15 chr17 32900874 32901112 -52537368 + L1ME LINE L1 5443 5699 -463 2383 74 0 0 chr17 32901114 32901428 -52537052 - AluY SINE Alu 0 314 1 826 149 0 50 chr17 32901429 32901570 -52536910 - AluSq/x SINE Alu -176 136 3 947 198 0 0 chr17 32901739 32901901 -52536579 - AluSc SINE Alu -14 295 134 1960 140 30 0 chr17 32901903 32902203 -52536277 - AluSx SINE Alu -3 309 1 1504 176 48 31 chr17 32902205 32902494 -52535986 - AluJo SINE Alu -18 294 1 1837 166 0 14 chr17 32902757 32903046 -52535434 - AluJb SINE Alu -27 285 1 189 0 0 0 chr17 32903243 32903264 -52535216 + (TG)n Simple_repeat Simple_repeat 1 21 0 1782 143 20 17 chr17 32903332 32903632 -52534848 + AluJb SINE Alu 1 301 -11 1953 151 20 3 chr17 32903715 32904014 -52534466 - AluSx SINE Alu -6 306 3 2584 48 0 3 chr17 32904394 32904706 -52533774 - AluY SINE Alu 0 311 1 1541 179 10 36 chr17 32904849 32905157 -52533323 - AluJo SINE Alu -10 302 3 1101 120 13 0 chr17 32905315 32905473 -52533007 + AluSc SINE Alu 140 299 -10 825 166 79 79 chr17 32905473 32905696 -52532784 + L1ME LINE L1 5280 5505 -657 1591 187 53 0 chr17 32905696 32905979 -52532501 + AluJb SINE Alu 1 298 -14 825 166 79 79 chr17 32905979 32906020 -52532460 + L1ME LINE L1 5504 5544 -618 337 288 214 41 chr17 32906021 32906136 -52532344 + L2 LINE L2 2886 2980 -333 2062 140 0 0 chr17 32906136 32906428 -52532052 - AluJb SINE Alu -14 298 7 337 288 214 41 chr17 32906428 32906444 -52532036 + L2 LINE L2 2980 2992 -321 2324 83 10 3 chr17 32906444 32906734 -52531746 - AluSc SINE Alu -17 292 1 337 288 214 41 chr17 32906734 32906966 -52531514 + L2 LINE L2 2992 3313 0 32 75 0 0 chr17 32907259 32907326 -52531154 + AT_rich Low_complexity Low_complexity 1 67 0 709 164 0 86 chr17 32907574 32907714 -52530766 - FLAM_A SINE Alu -5 128 1 2159 95 42 0 chr17 32907739 32908023 -52530457 + AluSx SINE Alu 1 296 -16 2376 84 0 0 chr17 32908091 32908387 -52530093 + AluY SINE Alu 1 296 -15 2411 92 0 13 chr17 32908631 32908947 -52529533 + AluSx SINE Alu 1 312 0 243 125 0 0 chr17 32909320 32909360 -52529120 + (CA)n Simple_repeat Simple_repeat 2 41 0 3383 158 42 54 chr17 32909470 32910401 -52528079 - MER21A LTR ERV1 -18 913 73 380 219 2 0 chr17 32910501 32910583 -52527897 - MER21A LTR ERV1 -780 83 1 833 165 0 0 chr17 32910609 32910742 -52527738 - FLAM_C SINE Alu 0 133 1 487 183 10 67 chr17 32912089 32912193 -52526287 + FLAM_C SINE Alu 21 118 -25 207 0 0 0 chr17 32912200 32912223 -52526257 + (CAAGA)n Simple_repeat Simple_repeat 3 25 0 216 171 0 43 chr17 32912508 32912578 -52525902 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 1804 161 18 11 chr17 32912625 32912904 -52525576 + AluJo SINE Alu 1 281 -31 1855 91 0 24 chr17 32912904 32913156 -52525324 - AluSc SINE Alu -8 301 55 1733 92 4 0 chr17 32913257 32913484 -52524996 + AluSg/x SINE Alu 65 292 -20 2163 120 3 3 chr17 32913494 32913794 -52524686 + AluSx SINE Alu 1 300 -12 930 159 29 12 chr17 32913812 32913982 -52524498 + AluSg/x SINE Alu 118 290 -20 295 287 152 24 chr17 32913994 32914158 -52524322 + L1ME1 LINE L1 5962 6146 -20 23 33 0 0 chr17 32914308 32914338 -52524142 + AT_rich Low_complexity Low_complexity 1 30 0 690 120 0 0 chr17 32914408 32914508 -52523972 - HY3 scRNA scRNA -1 100 1 2170 118 3 20 chr17 32914537 32914843 -52523637 + AluSx SINE Alu 1 301 -11 1967 104 83 0 chr17 32914982 32915260 -52523220 + AluSg SINE Alu 1 301 -9 2301 103 3 0 chr17 32915589 32915890 -52522590 + AluSp SINE Alu 1 302 -11 2316 164 5 16 chr17 32916171 32916542 -52521938 + Tigger7 DNA MER2_type 9 375 -2112 1675 161 27 14 chr17 32916575 32916867 -52521613 + AluJo SINE Alu 1 296 -16 2087 103 4 0 chr17 32916897 32917169 -52521311 + AluSp SINE Alu 1 273 -40 443 103 0 0 chr17 32917269 32917364 -52521116 + AluSc SINE Alu 224 318 0 536 179 24 140 chr17 32917364 32917571 -52520909 - L1MDa LINE L1 -5362 1178 996 2002 124 30 0 chr17 32917571 32917870 -52520610 - AluSq SINE Alu -5 308 1 1130 221 42 35 chr17 32917871 32918160 -52520320 - L1MDa LINE L1 -6248 292 2 1071 221 130 32 chr17 32918175 32918373 -52520107 - L1MEc LINE L1 -3019 3196 3019 239 54 27 0 chr17 32918373 32918410 -52520070 + (TTATG)n Simple_repeat Simple_repeat 4 41 0 2094 103 4 4 chr17 32918410 32918691 -52519789 - AluSg1 SINE Alu -28 281 1 1071 221 130 32 chr17 32918691 32918997 -52519483 - L1MEc LINE L1 -3195 3020 2641 2057 119 0 0 chr17 32918997 32919274 -52519206 - AluSx SINE Alu -35 277 1 723 196 21 21 chr17 32919274 32919417 -52519063 - AluJo SINE Alu -168 144 2 662 279 18 14 chr17 32919432 32919707 -52518773 - L1MEc LINE L1 -3586 2629 2355 1202 186 62 69 chr17 32919765 32919909 -52518571 - AluJb SINE Alu -13 289 146 2356 87 7 0 chr17 32919909 32920208 -52518272 - AluSp SINE Alu -12 301 1 203 0 37 0 chr17 32920216 32920243 -52518237 + (TG)n Simple_repeat Simple_repeat 1 28 0 1202 186 62 69 chr17 32920243 32920380 -52518100 - AluJb SINE Alu -163 139 1 2230 266 65 42 chr17 32920570 32921663 -52516817 - L1MEc LINE L1 -5235 1161 44 * 2444 221 115 116 chr17 32921659 32921906 -52516574 - L1ME LINE L1 -711 5520 5274 2321 33 44 0 chr17 32921906 32922217 -52516263 - AluY SINE Alu 0 323 1 2444 221 115 116 chr17 32922217 32922948 -52515532 - L1ME LINE L1 -957 5274 4544 1891 139 42 0 chr17 32922948 32923236 -52515244 - AluSx SINE Alu -12 300 1 2444 221 115 116 chr17 32923236 32923623 -52514857 - L1ME LINE L1 -1687 4544 4158 573 259 22 0 chr17 32923623 32923758 -52514722 - MER74A LTR ERVL 0 558 421 2444 221 115 116 chr17 32923758 32923962 -52514518 - L1ME LINE L1 -2073 4158 3955 1468 133 48 36 chr17 32923962 32924210 -52514270 - AluSx SINE Alu -61 251 1 2444 221 115 116 chr17 32924210 32924752 -52513728 - L1ME LINE L1 -2276 3955 3414 4085 137 21 6 chr17 32924752 32925378 -52513102 - MER41B LTR ERV1 0 635 1 2444 221 115 116 chr17 32925378 32925525 -52512955 - L1ME LINE L1 -2817 3414 3268 811 86 31 0 chr17 32925525 32925653 -52512827 + (CATTT)n Simple_repeat Simple_repeat 2 133 0 1956 133 0 18 chr17 32925653 32925938 -52512542 - AluSx SINE Alu -32 280 1 2444 221 115 116 chr17 32925938 32926093 -52512387 - L1ME LINE L1 -2961 3270 2748 494 242 90 43 chr17 32926127 32926338 -52512142 - L1ME LINE L1 -3550 2665 2445 1886 149 0 23 chr17 32926355 32926677 -52511803 - AluSx SINE Alu 0 312 1 246 302 52 0 chr17 32926678 32926794 -52511686 - L1ME LINE L1 -4003 2393 2272 2471 209 86 7 chr17 32926797 32927405 -52511075 - L1MB7 LINE L1 -106 6078 5423 1934 100 78 11 chr17 32927414 32927695 -52510785 - AluSg SINE Alu -10 300 1 1139 234 86 16 chr17 32927695 32928066 -52510414 - L1MB7 LINE L1 -814 5332 4936 1197 313 84 34 chr17 32928123 32928944 -52509536 - L1ME LINE L1 -4371 2025 1148 2360 95 7 3 chr17 32928944 32929249 -52509231 - AluSp SINE Alu -7 306 1 1197 313 84 34 chr17 32929249 32929375 -52509105 - L1ME LINE L1 -5248 1148 1030 902 203 11 5 chr17 32929377 32929564 -52508916 - AluJo SINE Alu -5 307 120 2144 118 0 0 chr17 32929678 32929977 -52508503 + AluSg SINE Alu 1 299 0 2058 130 10 13 chr17 32930072 32930380 -52508100 - AluSg SINE Alu -2 308 2 2400 94 0 0 chr17 32930414 32930722 -52507758 - AluY SINE Alu -3 308 1 1907 152 7 7 chr17 32930727 32931030 -52507450 - AluJb SINE Alu -9 303 1 2090 117 7 17 chr17 32931293 32931455 -52507025 - AluSx SINE Alu -16 296 137 2228 110 0 3 chr17 32931455 32931746 -52506734 - AluSc SINE Alu -19 290 1 2090 117 7 17 chr17 32931746 32931882 -52506598 - AluSx SINE Alu -175 137 1 3002 6 0 0 chr17 32931902 32932216 -52506264 - AluYb8 SINE Alu -4 314 1 441 297 21 14 chr17 32932216 32932361 -52506119 - MIR SINE MIR -97 165 20 541 217 17 0 chr17 32932371 32932491 -52505989 - MER20 DNA MER1_type 0 219 98 407 286 41 14 chr17 32932514 32932661 -52505819 - MIR SINE MIR -65 197 47 181 118 0 0 chr17 32933251 32933285 -52505195 + MIR SINE MIR 123 156 -106 1875 169 3 7 chr17 32933585 32933892 -52504588 + AluJo SINE Alu 1 306 -6 299 264 25 16 chr17 32936032 32936153 -52502327 - MER113 DNA MER1_type? -380 141 20 359 279 0 41 chr17 32936577 32936699 -52501781 + L2 LINE L2 2458 2574 -740 513 244 29 105 chr17 32937587 32937759 -52500721 + L1MD3 LINE L1 7705 7844 -151 1745 161 0 27 chr17 32937759 32938058 -52500422 - AluJo SINE Alu -21 291 1 513 244 29 105 chr17 32938058 32938200 -52500280 + L1MD3 LINE L1 7844 7995 0 928 319 37 11 chr17 32943313 32943980 -52494500 - L1MC4 LINE L1 -1629 6156 5479 231 313 82 61 chr17 32948700 32948847 -52489633 + MIR SINE MIR 94 243 -19 1696 186 21 3 chr17 32949882 32950220 -52488260 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 32950299 32950324 -52488156 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 701 165 133 19 chr17 32950670 32950828 -52487652 - THE1C LTR MaLR 0 375 200 1990 89 4 0 chr17 32950830 32951078 -52487402 - AluSx SINE Alu -63 249 1 2283 98 3 22 chr17 32951085 32951400 -52487080 - AluSx SINE Alu -3 309 1 2356 90 13 0 chr17 32951408 32951709 -52486771 - AluSg SINE Alu -5 305 1 389 231 143 88 chr17 32952074 32952159 -52486321 + MER102b DNA MER1_type 85 164 -1264 2570 57 3 0 chr17 32952159 32952459 -52486021 + AluSp SINE Alu 1 301 -12 389 231 143 88 chr17 32952459 32952611 -52485869 + MER102b DNA MER1_type 164 335 -6 2388 109 0 0 chr17 32952744 32953048 -52485432 + AluSg SINE Alu 1 304 -6 2410 80 20 3 chr17 32953232 32953532 -52484948 - AluSx SINE Alu -7 305 1 1084 92 0 0 chr17 32953631 32953784 -52484696 - L1PA13 LINE L1 -14 6149 5997 316 289 11 0 chr17 32953871 32953961 -52484519 - L2 LINE L2 0 3313 3223 719 295 31 9 chr17 32954475 32954699 -52483781 + MIR SINE MIR 33 261 -1 264 236 56 0 chr17 32957069 32957141 -52481339 + MIR SINE MIR 117 192 -70 705 172 43 50 chr17 32957252 32957472 -52481008 - L1MB2 LINE L1 -45 6133 5910 378 303 75 103 chr17 32957505 32957659 -52480821 - L1MB2 LINE L1 -298 5823 5679 2314 114 3 0 chr17 32957659 32957967 -52480513 - AluSx SINE Alu -3 309 1 378 303 75 103 chr17 32957967 32958093 -52480387 - L1MB2 LINE L1 -442 5679 5551 852 248 23 5 chr17 32958281 32958499 -52479981 - MER58A DNA MER1_type 0 224 3 2103 132 0 0 chr17 32958692 32959015 -52479465 + AluSx SINE Alu 1 323 0 1932 120 0 0 chr17 32959018 32959276 -52479204 + AluSg SINE Alu 40 297 -13 216 318 23 23 chr17 32959292 32959379 -52479101 + MER5A DNA MER1_type 1 98 -91 409 343 0 0 chr17 32959422 32959559 -52478921 + MIR SINE MIR 49 185 -77 574 285 69 36 chr17 32962264 32962569 -52475911 + L1ME4a LINE L1 5582 5896 -225 538 214 107 25 chr17 32963845 32964004 -52474476 - MER5A DNA MER1_type -7 182 11 2533 68 0 16 chr17 32964131 32964438 -52474042 + AluY SINE Alu 1 302 -9 2350 109 0 3 chr17 32964811 32965122 -52473358 + AluSg SINE Alu 1 310 0 405 0 0 0 chr17 32965707 32965752 -52472728 + (TG)n Simple_repeat Simple_repeat 1 45 0 437 291 35 65 chr17 32965987 32966186 -52472294 - L1ME4a LINE L1 -40 6081 5889 337 264 63 75 chr17 32966283 32966522 -52471958 - L1ME4a LINE L1 -1989 5819 5584 287 250 40 30 chr17 32966926 32967026 -52471454 - MER5B DNA MER1_type 0 178 78 466 309 82 21 chr17 32967163 32967396 -52471084 + MIR SINE MIR 13 259 -3 33 43 0 0 chr17 32967896 32967943 -52470537 + AT_rich Low_complexity Low_complexity 1 47 0 2181 110 17 3 chr17 32969877 32970177 -52468303 + AluSp SINE Alu 1 304 -9 496 247 90 75 chr17 32970675 32970930 -52467550 + L1ME4a LINE L1 5841 6099 -22 1219 142 21 29 chr17 32971038 32971277 -52467203 + Tigger7 DNA MER2_type 2255 2491 0 198 271 61 83 chr17 32971315 32971406 -52467074 - L2 LINE L2 -5 3308 3221 2248 92 13 23 chr17 32971406 32971709 -52466771 - AluSq SINE Alu -13 300 1 198 271 61 83 chr17 32971709 32971798 -52466682 - L2 LINE L2 -92 3221 3132 422 252 50 17 chr17 32971799 32971918 -52466562 + MIR SINE MIR 8 130 -132 1837 176 27 0 chr17 32972527 32972828 -52465652 + AluJo SINE Alu 1 309 -3 1798 154 46 0 chr17 32973029 32973314 -52465166 + AluSq SINE Alu 1 298 -15 22 56 0 0 chr17 32973394 32973430 -52465050 + AT_rich Low_complexity Low_complexity 1 36 0 2354 83 20 7 chr17 32973859 32974160 -52464320 + AluSx SINE Alu 1 305 -7 305 287 9 35 chr17 32974277 32974392 -52464088 + L1M4 LINE L1 3073 3184 -2962 418 352 83 42 chr17 32975060 32975357 -52463123 + L2 LINE L2 2352 2676 -638 2020 133 3 17 chr17 32975357 32975659 -52462821 - AluSx SINE Alu -14 298 1 418 352 83 42 chr17 32975659 32975833 -52462647 + L2 LINE L2 2676 2842 -472 1985 130 9 49 chr17 32976082 32976406 -52462074 - AluSx SINE Alu 0 312 2 819 274 26 0 chr17 32976583 32976809 -52461671 + MIR SINE MIR 31 262 0 181 109 43 0 chr17 32977267 32977313 -52461167 + (TA)n Simple_repeat Simple_repeat 1 48 0 1885 152 3 3 chr17 32977313 32977630 -52460850 - AluSx SINE Alu 0 317 1 229 303 15 0 chr17 32977715 32977781 -52460699 + L2 LINE L2 3239 3305 -8 2326 104 155 21 chr17 32978087 32978575 -52459905 + LTR61 LTR ERV1 2 595 0 270 228 0 0 chr17 32979053 32979110 -52459370 + MIR SINE MIR 82 138 -70 309 309 17 101 chr17 32979682 32979860 -52458620 - L2 LINE L2 -88 3184 3022 1113 57 0 7 chr17 32980901 32981041 -52457439 - L1PA15 LINE L1 -3 6162 6024 3346 158 4 13 chr17 32981146 32982017 -52456463 - L1P4 LINE L1 -578 5587 4728 1563 179 0 44 chr17 32982352 32982707 -52455773 - AluJb SINE Alu 0 342 1 532 261 69 78 chr17 32982980 32983225 -52455255 + MIR SINE MIR 5 247 -15 392 295 121 12 chr17 32984138 32984304 -52454176 + MIR3 SINE MIR 16 199 -9 204 312 98 29 chr17 32984984 32985157 -52453323 + L3 LINE CR1 1292 1476 -101 395 248 50 81 chr17 32985696 32985857 -52452623 - MIR SINE MIR -12 250 95 281 356 25 8 chr17 32985992 32986110 -52452370 + MIR SINE MIR 63 182 -80 243 256 154 0 chr17 32986163 32986241 -52452239 + MIR SINE MIR 108 197 -65 467 262 91 32 chr17 32986451 32986638 -52451842 - MIR3 SINE MIR -4 204 7 942 123 38 85 chr17 32986973 32987184 -52451296 - MER3 DNA MER1_type -4 205 5 2059 173 102 48 chr17 32987351 32987830 -52450650 + MLT1D LTR MaLR 1 505 0 339 269 0 0 chr17 32989118 32989196 -52449284 - MER2 DNA MER2_type 0 345 268 2386 90 0 0 chr17 32989320 32989619 -52448861 - AluSx SINE Alu -13 299 1 273 136 0 0 chr17 32989755 32989799 -52448681 - L2 LINE L2 -3 3310 3267 2216 40 0 0 chr17 32989970 32990217 -52448263 + L1PA3 LINE L1 5906 6152 -3 32 57 0 0 chr17 32990217 32990270 -52448210 + AT_rich Low_complexity Low_complexity 1 53 0 2160 129 0 0 chr17 32990416 32990710 -52447770 - AluSg SINE Alu -16 294 1 246 154 0 0 chr17 32991276 32991315 -52447165 - Alu SINE Alu -263 39 1 2059 114 7 17 chr17 32991578 32991740 -52446740 - AluSx SINE Alu -16 296 137 2194 110 0 3 chr17 32991740 32992031 -52446449 - AluSc SINE Alu -19 290 1 2059 114 7 17 chr17 32992031 32992167 -52446313 - AluSx SINE Alu -175 137 1 2881 10 0 0 chr17 32992187 32992498 -52445982 - AluYb8 SINE Alu -7 311 1 186 43 0 0 chr17 32992519 32992542 -52445938 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 420 315 11 88 chr17 32992762 32993022 -52445458 - L2 LINE L2 -196 3076 2837 2097 107 0 4 chr17 32993058 32993371 -52445109 - AluSc SINE Alu 0 312 1 456 149 27 0 chr17 32993503 32993577 -52444903 + MER44D DNA MER2_type 11 356 -253 2971 151 45 36 chr17 32993584 32993980 -52444500 - MER7C DNA MER2_type -2427 601 197 1764 155 87 31 chr17 32993980 32994335 -52444145 + THE1C LTR MaLR 1 375 0 2971 151 45 36 chr17 32994335 32994495 -52443985 - MER7C DNA MER2_type -2831 197 40 1239 145 61 0 chr17 32994512 32994564 -52443916 + MER44D DNA MER2_type 364 411 -2076 1697 148 23 30 chr17 32994564 32994869 -52443611 - AluSx SINE Alu -9 303 1 1239 145 61 0 chr17 32994869 32995044 -52443436 + MER44D DNA MER2_type 411 605 0 415 298 132 67 chr17 32995044 32995347 -52443133 - L2 LINE L2 -680 2634 2352 1918 138 21 3 chr17 32995347 32995637 -52442843 + AluSx SINE Alu 6 300 -12 415 298 132 67 chr17 32995637 32995797 -52442683 - L2 LINE L2 -962 2352 2204 2320 88 3 0 chr17 32995797 32996092 -52442388 + AluY SINE Alu 1 296 -15 415 298 132 67 chr17 32996092 32996211 -52442269 - L2 LINE L2 -1110 2204 2013 1805 199 88 20 chr17 32996221 32996619 -52441861 - MSTB LTR MaLR -1 425 1 2384 73 0 10 chr17 32996632 32996932 -52441548 - AluSc SINE Alu -11 298 2 798 187 0 14 chr17 32996944 32997083 -52441397 - FLAM_C SINE Alu -5 138 2 241 198 9 45 chr17 32997166 32997277 -52441203 + (TATG)n Simple_repeat Simple_repeat 2 108 0 189 171 0 0 chr17 32997282 32997317 -52441163 + (CA)n Simple_repeat Simple_repeat 2 36 0 1789 164 3 22 chr17 32997317 32997634 -52440846 - AluJb SINE Alu -1 311 1 2351 89 3 0 chr17 32998172 32998475 -52440005 - AluSp SINE Alu -9 304 1 1826 147 14 7 chr17 32999022 32999314 -52439166 + AluSx SINE Alu 1 294 -18 1581 158 9 80 chr17 32999532 32999868 -52438612 + AluJb SINE Alu 1 312 0 1911 143 16 13 chr17 33000480 33000788 -52437692 - AluSx SINE Alu -2 310 2 551 255 140 36 chr17 33000888 33001217 -52437263 - L1MC/D LINE L1 -2109 5699 5337 1308 168 191 0 chr17 33001237 33001493 -52436987 - AluSx SINE Alu -7 305 1 841 209 6 18 chr17 33001740 33001903 -52436577 - FRAM SINE Alu -14 162 2 2529 47 7 3 chr17 33002148 33002447 -52436033 + AluY SINE Alu 1 300 -11 216 186 47 0 chr17 33002621 33002664 -52435816 + T-rich Low_complexity Low_complexity 5 49 0 192 125 0 0 chr17 33002666 33002698 -52435782 + (TCCC)n Simple_repeat Simple_repeat 3 34 0 1661 164 23 39 chr17 33002700 33003010 -52435470 - AluJo SINE Alu -7 305 1 700 262 40 87 chr17 33003025 33003110 -52435370 - L1MEd LINE L1 -2712 3417 3330 1954 131 3 3 chr17 33003110 33003412 -52435068 - AluSx SINE Alu 0 302 1 700 262 40 87 chr17 33003412 33003493 -52434987 - L1MEd LINE L1 -2799 3330 3247 2151 74 0 104 chr17 33003493 33003694 -52434786 - AluSq SINE Alu -10 303 149 2404 66 0 0 chr17 33003694 33003995 -52434485 - AluY SINE Alu -10 301 1 2151 74 0 104 chr17 33003995 33004131 -52434349 - AluSq SINE Alu -164 149 1 700 262 40 87 chr17 33004131 33004458 -52434022 - L1MEd LINE L1 -2882 3247 2945 1535 145 0 24 chr17 33004460 33004715 -52433765 - AluJb SINE Alu 0 312 64 295 268 24 0 chr17 33004746 33004828 -52433652 - L1MEd LINE L1 -3166 2963 2880 21 36 0 0 chr17 33004987 33005015 -52433465 + AT_rich Low_complexity Low_complexity 1 28 0 327 281 93 87 chr17 33005054 33005140 -52433340 - L1MEd LINE L1 -4300 2010 1926 2102 138 0 0 chr17 33005140 33005438 -52433042 - AluSx SINE Alu -14 298 1 327 281 93 87 chr17 33005438 33005717 -52432763 - L1MEd LINE L1 -4384 1926 1643 443 303 119 31 chr17 33005817 33006190 -52432290 - L1MEd LINE L1 -4874 1245 906 1653 171 39 7 chr17 33006190 33006476 -52432004 - AluJo SINE Alu -17 295 1 443 303 119 31 chr17 33006476 33006734 -52431746 - L1MEd LINE L1 -5213 906 658 2112 139 3 0 chr17 33006734 33007037 -52431443 + AluSx SINE Alu 1 304 -8 443 303 119 31 chr17 33007037 33007116 -52431364 - L1MEd LINE L1 -5461 658 587 2409 88 3 0 chr17 33007348 33007655 -52430825 + AluSp SINE Alu 1 308 -5 959 69 0 0 chr17 33007805 33007921 -52430559 + AluSp/q SINE Alu 174 289 -24 1829 51 5 0 chr17 33008611 33008826 -52429654 + AluY SINE Alu 83 298 -13 1396 95 0 6 chr17 33009438 33009670 -52428810 - AluSg/x SINE Alu 0 333 103 26 0 0 0 chr17 33010200 33010226 -52428254 + AT_rich Low_complexity Low_complexity 1 26 0 3641 227 123 14 chr17 33010510 33010804 -52427676 - L1MC4 LINE L1 0 8042 7781 1917 152 3 7 chr17 33010804 33011114 -52427366 - AluSx SINE Alu -3 309 1 3641 227 123 14 chr17 33011114 33011956 -52426524 - L1MC4 LINE L1 -261 7781 6686 402 21 0 0 chr17 33011956 33012003 -52426477 + (TG)n Simple_repeat Simple_repeat 2 48 0 3641 227 123 14 chr17 33012003 33012061 -52426419 - L1MC4 LINE L1 -1356 6686 6636 1876 135 17 20 chr17 33012074 33012371 -52426109 + AluSx SINE Alu 1 296 -16 2197 114 0 3 chr17 33012373 33012671 -52425809 + AluSg SINE Alu 1 297 -13 1191 138 0 0 chr17 33012671 33012838 -52425642 + AluSg/x SINE Alu 132 298 -12 433 259 153 5 chr17 33012873 33013062 -52425418 - L1MC4a LINE L1 -1193 6615 6444 1515 188 11 11 chr17 33013377 33013648 -52424832 - AluJb SINE Alu -36 276 6 240 97 0 0 chr17 33013650 33013681 -52424799 - Alu SINE Alu -266 36 6 239 167 0 0 chr17 33013683 33013719 -52424761 - Alu SINE Alu -266 36 1 396 319 59 11 chr17 33013789 33014059 -52424421 - L1 LINE L1 -1129 5017 4735 323 211 99 56 chr17 33014138 33014280 -52424200 - L1 LINE L1 -1549 4597 4450 1625 165 9 38 chr17 33014349 33014665 -52423815 + AluJo SINE Alu 6 312 0 1884 159 0 17 chr17 33014680 33014982 -52423498 + AluJo SINE Alu 1 297 -15 277 388 0 0 chr17 33015122 33015207 -52423273 - L2 LINE L2 -3 3269 3185 23 33 0 0 chr17 33015250 33015280 -52423200 + AT_rich Low_complexity Low_complexity 1 30 0 1621 121 0 9 chr17 33015678 33015909 -52422571 - L1PB1 LINE L1 0 6151 5923 1904 147 0 32 chr17 33015929 33016241 -52422239 - AluSx SINE Alu -10 302 1 649 197 77 0 chr17 33016245 33016362 -52422118 - FLAM_C SINE Alu -16 127 2 237 65 0 0 chr17 33016642 33016673 -52421807 + (TG)n Simple_repeat Simple_repeat 2 32 0 1142 69 0 7 chr17 33016935 33017079 -52421401 - AluSg/x SINE Alu -14 296 154 722 90 0 0 chr17 33017079 33017168 -52421312 - AluY SINE Alu -221 90 2 1202 117 6 0 chr17 33017174 33017337 -52421143 - AluSg/x SINE Alu -15 297 134 1804 163 3 17 chr17 33017337 33017637 -52420843 - AluSx SINE Alu -16 296 1 510 17 0 0 chr17 33018555 33018614 -52419866 + (CA)n Simple_repeat Simple_repeat 2 60 0 1652 191 7 14 chr17 33019168 33019462 -52419018 - AluJb SINE Alu -20 292 1 1254 195 23 65 chr17 33019748 33020055 -52418425 - AluJo SINE Alu -8 294 1 1994 141 0 17 chr17 33020953 33021251 -52417229 - AluSx SINE Alu -13 299 7 2365 91 0 3 chr17 33021416 33021713 -52416767 + AluY SINE Alu 3 298 -13 2166 181 51 22 chr17 33021834 33022288 -52416192 - MLT1C LTR MaLR 0 467 1 416 301 8 45 chr17 33022290 33022423 -52416057 - MLT1C-int LTR MaLR -2 1369 1242 * 1232 219 61 52 chr17 33022422 33022520 -52415960 - MLT1C-int LTR MaLR -95 1276 1180 2204 126 0 3 chr17 33022520 33022822 -52415658 + AluSx SINE Alu 2 302 -10 1232 219 61 52 chr17 33022822 33023051 -52415429 - MLT1C-int LTR MaLR -191 1180 946 189 0 0 0 chr17 33023110 33023131 -52415349 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 834 194 0 0 chr17 33023190 33023324 -52415156 + FAM SINE Alu 1 44 -5 1025 152 0 33 chr17 33023324 33023508 -52414972 - MER47B DNA MER2_type -84 334 157 1289 180 41 34 chr17 33023508 33023655 -52414825 - AluJb SINE Alu -15 297 152 7254 112 19 24 chr17 33023655 33024730 -52413750 - MER11C LTR ERVK -2 1069 1 1289 180 41 34 chr17 33024730 33024877 -52413603 - AluJb SINE Alu -160 152 1 1803 156 121 48 chr17 33025005 33025402 -52413078 + Tigger1 DNA MER2_type 2 427 -1991 * 4683 129 34 7 chr17 33025393 33026131 -52412349 + Tigger1 DNA MER2_type 1326 2083 -335 439 186 0 0 chr17 33026164 33026234 -52412246 + FLAM SINE Alu 50 119 -24 216 0 0 0 chr17 33026236 33026260 -52412220 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 394 241 0 0 chr17 33026280 33026363 -52412117 + Tigger1 DNA MER2_type 2109 2191 -227 534 65 0 39 chr17 33026428 33026505 -52411975 + AluJ/FRAM SINE Alu 231 304 -8 2200 90 3 42 chr17 33026509 33026819 -52411661 + AluY SINE Alu 1 298 -13 204 254 48 32 chr17 33026971 33027034 -52411446 + MIR SINE MIR 14 77 -185 198 215 154 100 chr17 33027037 33027167 -52411313 + MIR SINE MIR 44 180 -82 22 0 0 0 chr17 33028190 33028212 -52410268 + AT_rich Low_complexity Low_complexity 1 22 0 2193 198 63 11 chr17 33028944 33029464 -52409016 - L1MB4 LINE L1 -7 6173 5627 1671 163 39 14 chr17 33029478 33029761 -52408719 - AluJo SINE Alu -22 290 1 283 231 207 0 chr17 33029763 33029884 -52408596 - L1MB4 LINE L1 -816 5330 5185 2020 117 10 29 chr17 33029889 33030196 -52408284 - AluSx SINE Alu -11 301 1 1663 225 136 29 chr17 33030196 33030699 -52407781 + L1M4 LINE L1 4187 4635 -1511 2300 85 3 7 chr17 33030699 33030993 -52407487 + AluY SINE Alu 1 293 -18 2333 117 7 0 chr17 33030995 33031302 -52407178 + AluSx SINE Alu 1 309 -3 1663 225 136 29 chr17 33031302 33031418 -52407062 + L1M4 LINE L1 4635 4876 -1270 1877 164 0 0 chr17 33031421 33031696 -52406784 + AluSx SINE Alu 2 276 -36 420 153 0 0 chr17 33031719 33031778 -52406702 + AluSg/x SINE Alu 213 271 -38 330 211 28 0 chr17 33031778 33031887 -52406593 + GA-rich Low_complexity Low_complexity 1 112 0 1743 190 82 33 chr17 33031888 33032206 -52406274 + L1M4 LINE L1 4868 5215 -944 1836 145 3 53 chr17 33032206 33032524 -52405956 + AluJo SINE Alu 1 302 -10 1743 190 82 33 chr17 33032524 33032737 -52405743 + L1M4 LINE L1 5215 5416 -743 1470 178 0 35 chr17 33032751 33033009 -52405471 + AluJo SINE Alu 51 299 -13 16032 67 14 1 chr17 33033453 33035521 -52402959 + HERVL LTR ERVL 2659 4753 -901 474 285 42 4 chr17 33035537 33035765 -52402715 - L1MC4a LINE L1 -234 5936 5702 276 143 0 0 chr17 33035816 33035865 -52402615 + L1M4 LINE L1 5238 5286 -860 1680 176 21 0 chr17 33035868 33036158 -52402322 + AluJb SINE Alu 2 297 -15 1475 124 0 0 chr17 33036268 33036462 -52402018 + AluSx SINE Alu 2 195 -117 585 213 22 7 chr17 33036473 33036609 -52401871 - MLT1A1 LTR MaLR -203 162 25 272 132 19 0 chr17 33036619 33036672 -52401808 + L1 LINE L1 5188 5241 -905 205 154 0 0 chr17 33036700 33036706 -52401774 + (TA)n Simple_repeat Simple_repeat 1 6 -33 1807 185 0 3 chr17 33036706 33036998 -52401482 + AluJb SINE Alu 1 291 -21 205 154 0 0 chr17 33036998 33037030 -52401450 + (TA)n Simple_repeat Simple_repeat 5 39 0 320 258 43 34 chr17 33037032 33037151 -52401329 + L1MC3 LINE L1 6550 6691 -1137 1048 92 0 29 chr17 33037159 33037333 -52401147 - Tigger7 DNA MER2_type -26 2461 2293 1499 99 0 0 chr17 33037336 33037528 -52400952 - AluSg/x SINE Alu -19 291 100 365 103 17 0 chr17 33037886 33037944 -52400536 + MLT2A1 LTR ERVL 202 260 -184 356 184 38 6 chr17 33038015 33038173 -52400307 + (TA)n Simple_repeat Simple_repeat 2 164 0 318 121 0 45 chr17 33038176 33038242 -52400238 + MLT2B1 LTR ERVL 458 520 0 10338 205 23 35 chr17 33038243 33040462 -52398018 + ERVL-B1 LTR ERVL 2 2194 -3570 1596 103 94 0 chr17 33040563 33040787 -52397693 - AluSq SINE Alu -68 245 1 2220 131 3 0 chr17 33041445 33041757 -52396723 + AluSq SINE Alu 1 313 0 934 147 22 0 chr17 33041777 33041913 -52396567 + AluJo SINE Alu 1 139 -173 452 296 53 7 chr17 33042062 33042214 -52396266 - MIR SINE MIR -21 241 83 2444 82 0 10 chr17 33042281 33042586 -52395894 + AluSq SINE Alu 1 302 -11 494 260 24 16 chr17 33042621 33042748 -52395732 + MER5B DNA MER1_type 50 177 -1 2350 110 0 0 chr17 33043457 33043758 -52394722 - AluSx SINE Alu -11 301 1 452 296 53 7 chr17 33043825 33043977 -52394503 + MIR SINE MIR 83 241 -21 465 246 125 39 chr17 33044222 33044266 -52394214 - L1ME4a LINE L1 -46 6075 6036 2130 116 10 7 chr17 33044266 33044568 -52393912 + AluSc SINE Alu 1 303 -6 465 246 125 39 chr17 33044568 33044779 -52393701 - L1ME4a LINE L1 -85 6036 5798 996 183 16 5 chr17 33044788 33044974 -52393506 - MER5A DNA MER1_type 0 189 2 1717 185 0 3 chr17 33045131 33045417 -52393063 - AluJb SINE Alu -25 287 3 2832 163 20 57 chr17 33045474 33045657 -52392823 + L1MA10 LINE L1 5736 5924 -410 2523 50 0 20 chr17 33045657 33045959 -52392521 - AluY SINE Alu -15 296 1 2832 163 20 57 chr17 33045959 33046387 -52392093 + L1MA10 LINE L1 5924 6324 -10 1870 169 0 23 chr17 33046387 33046694 -52391786 - AluJo SINE Alu -12 300 1 268 352 49 14 chr17 33046893 33047035 -52391445 - L2 LINE L2 -3 3310 3164 627 228 52 92 chr17 33047146 33047492 -52390988 + MER45C DNA AcHobo 118 449 -504 466 255 99 42 chr17 33047580 33047792 -52390688 + MER45C DNA AcHobo 394 617 -336 346 113 19 0 chr17 33047793 33047846 -52390634 + MER45C DNA AcHobo 900 953 0 1786 165 16 3 chr17 33049054 33049375 -52389105 + L1PA16 LINE L1 5822 6146 -20 2398 57 0 3 chr17 33049387 33049712 -52388768 + AluY SINE Alu 3 326 0 1153 176 147 7 chr17 33049717 33050024 -52388456 - MER69 DNA AcHobo -240 2286 1937 2152 106 0 31 chr17 33050265 33050585 -52387895 + AluSg SINE Alu 1 310 0 643 275 62 10 chr17 33050595 33050788 -52387692 + MIR SINE MIR 5 207 -55 247 300 56 0 chr17 33050982 33051072 -52387408 - L2 LINE L2 -9 3263 3169 429 259 65 0 chr17 33051847 33051955 -52386525 + MIR SINE MIR 33 147 -61 292 272 98 63 chr17 33052135 33052373 -52386107 - MLT1K LTR MaLR -51 537 321 515 193 0 50 chr17 33053546 33053665 -52384815 - MIR SINE MIR 0 262 150 1930 113 0 0 chr17 33053767 33054015 -52384465 - AluSq SINE Alu -65 248 1 1674 174 26 45 chr17 33054072 33054383 -52384097 + AluSx SINE Alu 8 312 0 1975 158 3 0 chr17 33054668 33054960 -52383520 + AluJb SINE Alu 1 293 -19 2416 88 7 0 chr17 33055237 33055545 -52382935 - AluSx SINE Alu -2 310 1 3878 147 22 52 chr17 33055545 33055868 -52382612 - L1MB8 LINE L1 -106 6072 5741 1936 139 45 0 chr17 33055868 33056156 -52382324 - AluSx SINE Alu -11 301 1 3878 147 22 52 chr17 33056156 33056509 -52381971 - L1MB8 LINE L1 -437 5741 5379 1613 188 41 54 chr17 33056509 33056877 -52381603 + MLT1A1 LTR MaLR 3 365 0 3878 147 22 52 chr17 33056877 33056924 -52381556 - L1MB8 LINE L1 -799 5379 5332 1950 169 7 0 chr17 33056924 33057232 -52381248 - AluSx SINE Alu -2 310 1 3878 147 22 52 chr17 33057232 33057371 -52381109 - L1MB8 LINE L1 -846 5332 5240 1343 125 64 46 chr17 33057388 33057490 -52380990 + MER44D DNA MER2_type 29 128 -2363 2295 96 0 0 chr17 33057490 33057781 -52380699 + AluSg SINE Alu 1 291 -19 1343 125 64 46 chr17 33057781 33057958 -52380522 + MER44D DNA MER2_type 128 583 -26 334 323 0 0 chr17 33057958 33058054 -52380426 + L1MC4 LINE L1 6610 6705 -1337 320 253 40 40 chr17 33057986 33058085 -52380395 - L1MC3 LINE L1 -1137 6648 6550 * 213 125 0 0 chr17 33058090 33058123 -52380357 + (TA)n Simple_repeat Simple_repeat 2 37 -4 1821 186 0 3 chr17 33058123 33058418 -52380062 - AluJb SINE Alu -18 294 1 213 125 0 0 chr17 33058418 33058424 -52380056 + (TA)n Simple_repeat Simple_repeat 36 41 0 265 120 20 0 chr17 33058455 33058505 -52379975 - L1 LINE L1 -908 5238 5188 585 213 22 7 chr17 33058515 33058651 -52379829 + MLT1A1 LTR MaLR 25 162 -203 1484 119 0 0 chr17 33058662 33058856 -52379624 - AluSx SINE Alu -117 195 2 1694 172 21 0 chr17 33058965 33059255 -52379225 - AluJb SINE Alu -15 297 2 276 143 0 0 chr17 33059258 33059307 -52379173 - L1M4 LINE L1 -860 5286 5238 452 268 53 14 chr17 33059357 33059566 -52378914 + L1ME4a LINE L1 5703 5919 -202 315 147 14 4 chr17 33059611 33059838 -52378642 + AluJo SINE Alu 1 312 0 2105 122 0 34 chr17 33059838 33060168 -52378312 + AluSx SINE Alu 1 320 0 250 116 43 58 chr17 33060241 33060310 -52378170 - Tigger3(Golem) DNA MER2_type -2693 336 269 707 177 0 0 chr17 33060338 33060451 -52378029 - Tigger3(Golem) DNA MER2_type -2916 113 1 937 185 5 11 chr17 33060761 33060945 -52377535 + Tigger6 DNA MER2_type 1414 1596 -1 2304 107 0 13 chr17 33061153 33061463 -52377017 - AluSx SINE Alu -6 306 1 1008 178 0 18 chr17 33061596 33061765 -52376715 - FRAM SINE Alu 0 166 1 32 43 0 0 chr17 33061774 33061820 -52376660 + AT_rich Low_complexity Low_complexity 1 46 0 31 0 0 0 chr17 33061969 33062000 -52376480 + AT_rich Low_complexity Low_complexity 1 31 0 2288 117 10 0 chr17 33062067 33062374 -52376106 - AluSx SINE Alu 0 312 3 925 127 8 8 chr17 33062733 33062867 -52375613 + AluJo SINE Alu 1 134 -178 4400 138 61 35 chr17 33063456 33064472 -52374008 + L1MB4 LINE L1 5135 6168 -12 180 0 0 0 chr17 33064472 33064492 -52373988 + (TA)n Simple_repeat Simple_repeat 1 20 0 4400 138 61 35 chr17 33064492 33064505 -52373975 + L1MB4 LINE L1 6168 6179 -1 314 122 20 0 chr17 33065770 33065819 -52372661 + 5S rRNA rRNA 1 50 -71 1723 165 0 4 chr17 33065839 33066105 -52372375 + AluJb SINE Alu 1 265 -47 1686 186 3 10 chr17 33066714 33067025 -52371455 + AluJo SINE Alu 1 309 -3 841 199 76 21 chr17 33067312 33067548 -52370932 - L1ME3 LINE L1 -20 6142 5894 191 71 0 0 chr17 33067969 33067997 -52370483 - MIR SINE MIR -112 150 123 396 315 34 13 chr17 33068584 33068733 -52369747 + MIR SINE MIR 47 198 -64 535 200 25 8 chr17 33068755 33068875 -52369605 + MER20 DNA MER1_type 98 219 0 540 259 144 4 chr17 33068937 33069173 -52369307 - MER113 DNA MER1_type? -233 288 20 375 279 0 41 chr17 33069597 33069719 -52368761 + L2 LINE L2 2458 2574 -740 495 231 22 50 chr17 33070740 33070779 -52367701 + L1MD3 LINE L1 7819 7858 -137 1762 157 0 27 chr17 33070779 33071078 -52367402 - AluJo SINE Alu -21 291 1 495 231 22 50 chr17 33071078 33071220 -52367260 + L1MD3 LINE L1 7858 7995 0 190 229 115 0 chr17 33071526 33071587 -52366893 - L2 LINE L2 -343 2970 2903 788 299 40 17 chr17 33076496 33077015 -52361465 - L1MC3 LINE L1 -1771 6014 5484 231 313 82 61 chr17 33081739 33081886 -52356594 + MIR SINE MIR 94 243 -19 1696 186 21 3 chr17 33082921 33083259 -52355221 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 33083338 33083363 -52355117 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 701 165 133 19 chr17 33083709 33083867 -52354613 - THE1C LTR MaLR 0 375 200 1990 89 4 0 chr17 33083869 33084117 -52354363 - AluSx SINE Alu -63 249 1 2289 96 3 22 chr17 33084124 33084437 -52354043 - AluSx SINE Alu -5 307 1 2405 86 13 0 chr17 33084445 33084747 -52353733 - AluSg SINE Alu -4 306 1 22 0 0 0 chr17 33085326 33085348 -52353132 + AT_rich Low_complexity Low_complexity 1 22 0 183 247 0 96 chr17 33086656 33086729 -52351751 - MIR SINE MIR -10 252 187 2366 99 0 10 chr17 33087276 33087588 -52350892 - AluSg SINE Alu -1 309 1 364 290 23 15 chr17 33088048 33088179 -52350301 + Charlie8 DNA MER1_type 37 168 -2249 1035 58 0 0 chr17 33088180 33088301 -52350179 + AluSp SINE Alu 1 121 -192 1680 126 4 16 chr17 33088480 33088727 -52349753 - AluSx SINE Alu -5 307 64 2470 84 0 0 chr17 33089245 33089541 -52348939 + AluSc SINE Alu 1 296 -13 1472 175 77 25 chr17 33089573 33089859 -52348621 + AluJb SINE Alu 1 301 -11 2244 114 0 3 chr17 33090614 33090920 -52347560 + AluSg SINE Alu 1 305 -5 370 244 64 45 chr17 33091400 33091556 -52346924 + L1MC4 LINE L1 6811 6969 -1073 1643 199 6 10 chr17 33091614 33091926 -52346554 + AluJb SINE Alu 2 312 0 849 174 61 88 chr17 33091927 33092221 -52346259 + L1MC5 LINE L1 6906 7191 -770 613 205 139 12 chr17 33092236 33092402 -52346078 - MER20 DNA MER1_type 0 219 33 587 230 20 0 chr17 33092515 33092667 -52345813 + L1MC5 LINE L1 7311 7465 -496 202 234 0 0 chr17 33092747 33092794 -52345686 + A-rich Low_complexity Low_complexity 1 47 0 982 198 86 0 chr17 33092801 33092998 -52345482 + AluJb SINE Alu 92 305 -7 2698 137 15 28 chr17 33093290 33093763 -52344717 + MLT1C LTR MaLR 1 467 0 2285 109 0 0 chr17 33093914 33094216 -52344264 + AluSg1 SINE Alu 1 302 -7 1429 132 0 10 chr17 33094264 33094468 -52344012 + AluSq SINE Alu 33 234 -79 503 171 0 0 chr17 33094478 33094566 -52343914 + AluJb SINE Alu 213 300 -12 2222 131 0 10 chr17 33094567 33094872 -52343608 + AluSg SINE Alu 1 302 -8 2179 125 0 16 chr17 33094882 33095193 -52343287 + AluSc SINE Alu 1 306 -3 403 245 99 26 chr17 33095196 33095388 -52343092 + L1MC4a LINE L1 7034 7239 -569 2109 135 0 0 chr17 33095390 33095687 -52342793 + AluSx SINE Alu 1 297 -15 309 260 21 0 chr17 33095687 33095776 -52342704 + L1MC4 LINE L1 7808 7901 -141 1822 166 3 0 chr17 33096234 33096517 -52341963 + AluSx SINE Alu 12 295 -17 2537 75 0 0 chr17 33096519 33096824 -52341656 + AluY SINE Alu 1 305 -6 202 350 17 0 chr17 33096978 33097038 -52341442 + MIR SINE MIR 17 77 -185 229 247 0 90 chr17 33097041 33097130 -52341350 + MIR SINE MIR 44 124 -138 26 0 0 0 chr17 33097470 33097496 -52340984 + AT_rich Low_complexity Low_complexity 1 26 0 186 278 42 0 chr17 33098257 33098329 -52340151 + MIR SINE MIR 132 206 -56 1853 124 0 29 chr17 33098539 33098813 -52339667 + AluSx SINE Alu 30 295 -17 400 311 104 0 chr17 33098950 33099114 -52339366 - MIR SINE MIR -19 243 63 306 289 104 39 chr17 33099171 33099528 -52338952 - L1ME4a LINE L1 -167 5954 5575 693 246 103 18 chr17 33099600 33099824 -52338656 - MIR SINE MIR -11 251 9 340 285 90 86 chr17 33100735 33101089 -52337391 - L1ME4a LINE L1 -47 6074 5716 972 214 41 23 chr17 33101089 33101309 -52337171 - MER58A DNA MER1_type 0 224 1 340 285 90 86 chr17 33101309 33101455 -52337025 - L1ME4a LINE L1 -405 5716 5572 359 217 108 0 chr17 33101756 33101786 -52336694 - L1MA9 LINE L1 0 6312 6283 546 297 62 75 chr17 33101786 33101842 -52336638 - L1MD2 LINE L1 -216 6143 6088 3979 166 57 25 chr17 33101842 33103036 -52335444 - L1MA9 LINE L1 -198 6114 4873 319 49 39 0 chr17 33103040 33103097 -52335383 - MER41A LTR ERV1 -76 478 418 286 242 0 0 chr17 33103097 33103163 -52335317 - L1MD2 LINE L1 -1261 4885 4820 2896 19 0 0 chr17 33103173 33103486 -52334994 - AluYb8 SINE Alu -5 313 1 441 297 21 14 chr17 33103486 33103631 -52334849 - MIR SINE MIR -97 165 20 541 217 17 0 chr17 33103641 33103761 -52334719 - MER20 DNA MER1_type 0 219 98 407 286 41 14 chr17 33103784 33103931 -52334549 - MIR SINE MIR -65 197 47 181 118 0 0 chr17 33104521 33104555 -52333925 + MIR SINE MIR 123 156 -106 1889 166 3 7 chr17 33104855 33105162 -52333318 + AluJo SINE Alu 1 306 -6 299 264 25 16 chr17 33107302 33107423 -52331057 - MER113 DNA MER1_type? -380 141 20 342 287 0 41 chr17 33107847 33107969 -52330511 + L2 LINE L2 2458 2574 -740 533 241 29 105 chr17 33108857 33109029 -52329451 + L1MD3 LINE L1 7705 7844 -151 1740 157 0 33 chr17 33109029 33109328 -52329152 - AluJo SINE Alu -23 289 1 533 241 29 105 chr17 33109328 33109470 -52329010 + L1MD3 LINE L1 7844 7995 0 955 300 39 17 chr17 33114705 33115241 -52323239 - L1MC3 LINE L1 -1754 6031 5484 231 313 82 61 chr17 33119962 33120109 -52318371 + MIR SINE MIR 94 243 -19 1785 188 12 3 chr17 33121144 33121485 -52316995 - MER2 DNA MER2_type 0 344 1 243 61 0 0 chr17 33121804 33121837 -52316643 + (CTGGGG)n Simple_repeat Simple_repeat 3 35 0 1453 165 109 26 chr17 33121942 33122282 -52316198 - THE1C LTR MaLR -1 374 7 258 116 0 0 chr17 33123087 33123130 -52315350 + (CCCCCA)n Simple_repeat Simple_repeat 4 46 0 272 231 20 7 chr17 33123456 33123603 -52314877 + GA-rich Low_complexity Low_complexity 2 150 0 282 56 0 0 chr17 33124118 33124154 -52314326 + (TG)n Simple_repeat Simple_repeat 2 37 0 2976 139 15 8 chr17 33124352 33124833 -52313647 - MER1A DNA MER1_type 0 529 46 617 198 25 0 chr17 33125027 33125148 -52313332 - MLT1C LTR MaLR 0 467 344 240 362 124 34 chr17 33125838 33126225 -52312255 + L2 LINE L2 987 1408 -1906 229 329 131 25 chr17 33126413 33126687 -52311793 + L2 LINE L2 1791 2093 -1221 350 267 78 0 chr17 33126689 33126779 -52311701 - MER117 DNA MER1_type -97 100 4 1389 94 0 6 chr17 33127157 33127338 -52311142 + AluSg SINE Alu 1 180 -130 1079 293 79 51 chr17 33128133 33128923 -52309557 - HAL1 LINE L1 -608 1899 1082 567 164 136 0 chr17 33128923 33129033 -52309447 - FLAM_C SINE Alu -7 126 2 1079 293 79 51 chr17 33129033 33129086 -52309394 - HAL1 LINE L1 -1425 1082 1032 2180 123 13 0 chr17 33129099 33129401 -52309079 - AluSx SINE Alu -6 306 1 249 344 0 0 chr17 33129410 33129474 -52309006 - HAL1 LINE L1 -1652 855 792 2147 123 0 3 chr17 33130671 33130954 -52307526 + AluSx SINE Alu 1 304 -8 1203 90 11 0 chr17 33130954 33131131 -52307349 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 459 157 0 0 chr17 33134012 33134101 -52304379 + GA-rich Low_complexity Low_complexity 2 90 0 1726 164 70 3 chr17 33134270 33134556 -52303924 + AluSx SINE Alu 1 305 -7 2073 133 0 31 chr17 33134828 33135145 -52303335 - AluJb SINE Alu 0 312 6 1582 164 25 25 chr17 33136287 33136605 -52301875 + AluJo SINE Alu 1 318 0 180 0 0 0 chr17 33138092 33138112 -52300368 + (CA)n Simple_repeat Simple_repeat 1 20 0 871 167 15 128 chr17 33138794 33138998 -52299482 + MLT1C LTR MaLR 210 467 0 3066 146 0 8 chr17 33139189 33139677 -52298803 + MER1A DNA MER1_type 46 529 0 600 244 0 0 chr17 33139890 33140070 -52298410 + (CA)n Simple_repeat Simple_repeat 1 180 0 272 231 20 7 chr17 33140586 33140733 -52297747 + CT-rich Low_complexity Low_complexity 2 150 0 258 116 0 0 chr17 33141059 33141102 -52297378 + (TGGGGG)n Simple_repeat Simple_repeat 4 46 0 210 216 0 59 chr17 33141161 33141212 -52297268 + C-rich Low_complexity Low_complexity 1 48 0 1475 162 109 26 chr17 33141915 33142255 -52296225 + THE1C LTR MaLR 7 374 -1 330 26 0 0 chr17 33142360 33142399 -52296081 + (CCCCAG)n Simple_repeat Simple_repeat 3 41 0 1685 193 24 3 chr17 33142718 33143055 -52295425 + MER2 DNA MER2_type 1 344 0 231 313 82 61 chr17 33144090 33144237 -52294243 - MIR SINE MIR -19 243 94 936 319 37 11 chr17 33148957 33149624 -52288856 + L1MC4 LINE L1 5479 6156 -1629 184 229 115 0 chr17 33154370 33154431 -52284049 + L2 LINE L2 2903 2970 -343 533 241 29 105 chr17 33154737 33154879 -52283601 - L1MD3 LINE L1 0 7995 7889 1693 164 0 33 chr17 33154879 33155178 -52283302 + AluJo SINE Alu 1 289 -23 533 241 29 105 chr17 33155178 33155350 -52283130 - L1MD3 LINE L1 -106 7889 7705 342 287 0 41 chr17 33156238 33156360 -52282120 - L2 LINE L2 -740 2574 2458 299 264 25 16 chr17 33156784 33156905 -52281575 + MER113 DNA MER1_type? 20 141 -380 1875 169 3 7 chr17 33159053 33159360 -52279120 - AluJo SINE Alu -6 306 1 181 118 0 0 chr17 33159660 33159694 -52278786 - MIR SINE MIR -106 156 123 445 277 34 14 chr17 33160284 33160432 -52278048 + MIR SINE MIR 47 197 -65 541 217 17 0 chr17 33160455 33160575 -52277905 + MER20 DNA MER1_type 98 219 0 431 303 21 14 chr17 33160585 33160730 -52277750 + MIR SINE MIR 20 165 -97 294 242 0 0 chr17 33160730 33160796 -52277684 + L1MD2 LINE L1 4820 4885 -1261 319 49 39 0 chr17 33160796 33160853 -52277627 + MER41A LTR ERV1 418 478 -76 3893 162 59 28 chr17 33160859 33162053 -52276427 + L1MA9 LINE L1 4873 6114 -198 547 312 55 68 chr17 33161654 33162109 -52276371 + L1MD2 LINE L1 5695 6143 -216 * 365 232 56 0 chr17 33162019 33162144 -52276336 + L1MA9 LINE L1 6180 6311 -1 * 327 284 86 92 chr17 33162433 33162579 -52275901 + L1ME4a LINE L1 5572 5717 -404 964 214 41 23 chr17 33162579 33162799 -52275681 + MER58A DNA MER1_type 1 224 0 327 284 86 92 chr17 33162799 33163187 -52275293 + L1ME4a LINE L1 5717 6103 -18 666 248 104 18 chr17 33164066 33164288 -52274192 + MIR SINE MIR 11 251 -11 258 282 102 39 chr17 33164346 33164679 -52273801 + L1ME4a LINE L1 5558 5911 -210 440 300 111 0 chr17 33164772 33164952 -52273528 + MIR SINE MIR 63 262 0 1892 117 0 29 chr17 33165072 33165346 -52273134 - AluSx SINE Alu -17 295 30 189 259 111 0 chr17 33165559 33165640 -52272840 - MIR SINE MIR -56 206 117 228 265 64 34 chr17 33166216 33166326 -52272154 + MIR SINE MIR 46 145 -63 390 366 41 0 chr17 33166392 33166564 -52271916 + MER91A DNA MER1_type 1 179 -17 298 250 69 0 chr17 33166573 33166645 -52271835 + MER91A DNA MER1_type 119 195 -1 22 80 0 0 chr17 33168550 33168600 -52269880 + AT_rich Low_complexity Low_complexity 1 50 0 414 323 175 0 chr17 33168692 33168909 -52269571 + MIR SINE MIR 3 257 -5 407 325 88 26 chr17 33168952 33169293 -52269187 + L1MC4a LINE L1 5575 5936 -185 434 293 38 8 chr17 33169353 33169486 -52268994 + MIR SINE MIR 40 176 -86 2084 159 0 0 chr17 33169506 33169815 -52268665 - AluSx SINE Alu -3 309 1 281 282 16 48 chr17 33170224 33170348 -52268132 - MIR SINE MIR -140 122 3 586 250 88 29 chr17 33170407 33170647 -52267833 - MIR SINE MIR -7 255 2 357 336 57 0 chr17 33171093 33171215 -52267265 + MIR SINE MIR 62 190 -72 234 270 102 0 chr17 33171499 33171637 -52266843 + MIR SINE MIR 98 252 -10 603 154 26 115 chr17 33171928 33172084 -52266396 + FLAM_A SINE Alu 1 142 0 377 368 5 42 chr17 33172178 33172368 -52266112 + L1MC4a LINE L1 5736 5918 -1890 1701 261 102 9 chr17 33172929 33173585 -52264895 + L1M4 LINE L1 4377 5093 -1053 338 109 0 0 chr17 33173603 33173658 -52264822 - AluSp/q SINE Alu 0 303 249 713 190 112 34 chr17 33173686 33173865 -52264615 - L1PB4 LINE L1 0 6156 5964 1479 218 30 22 chr17 33173866 33174228 -52264252 + MLT1A1 LTR MaLR 1 365 0 2658 214 9 25 chr17 33174739 33175310 -52263170 - MER68 LTR ERV1 0 562 1 2036 191 0 3 chr17 33175373 33175739 -52262741 + MLT1A1 LTR MaLR 1 365 0 1462 325 25 12 chr17 33175788 33176385 -52262095 - ERVL LTR ERVL -3451 2313 1709 268 215 11 11 chr17 33176386 33176479 -52262001 + CT-rich Low_complexity Low_complexity 1 93 0 263 331 25 43 chr17 33176563 33176726 -52261754 - ERVL LTR ERVL -4729 1035 876 2299 93 0 13 chr17 33177483 33177785 -52260695 + AluY SINE Alu 1 298 -13 1147 218 17 3 chr17 33178067 33178365 -52260115 - L1M4 LINE L1 -1360 4786 4485 8748 41 1 4 chr17 33179417 33180389 -52258091 - LTR5 LTR ERVK 0 969 1 2033 159 0 6 chr17 33180440 33180754 -52257726 + AluJb SINE Alu 1 312 0 180 0 0 0 chr17 33180876 33180896 -52257584 + (TCTA)n Simple_repeat Simple_repeat 3 22 0 30 0 0 0 chr17 33181104 33181134 -52257346 + AT_rich Low_complexity Low_complexity 1 30 0 1372 219 33 12 chr17 33181258 33181591 -52256889 - MER58B DNA MER1_type -1 340 1 2080 109 0 0 chr17 33181643 33181909 -52256571 - AluSx SINE Alu -46 266 1 2171 121 45 22 chr17 33181996 33182352 -52256128 + THE1B LTR MaLR 1 364 0 241 330 119 32 chr17 33183041 33183259 -52255221 + L2 LINE L2 2943 3179 -93 1062 223 40 80 chr17 33184260 33184587 -52253893 + LTR53 LTR ERVL 192 505 -14 2132 113 0 7 chr17 33185620 33185922 -52252558 - AluSx SINE Alu -10 302 3 21 0 0 0 chr17 33186103 33186124 -52252356 + AT_rich Low_complexity Low_complexity 1 21 0 686 295 38 53 chr17 33186431 33186859 -52251621 + ERVL LTR ERVL 4966 5432 -324 1001 330 87 18 chr17 33187538 33188044 -52250436 - ERVL LTR ERVL -2143 3621 3081 724 319 44 34 chr17 33188085 33188495 -52249985 - ERVL LTR ERVL -2870 2894 2481 14927 124 32 28 chr17 33188893 33189231 -52249249 - Tigger1 DNA MER2_type 0 2418 2083 1957 149 0 0 chr17 33189231 33189539 -52248941 - AluSx SINE Alu 0 312 5 14927 124 32 28 chr17 33189539 33191609 -52246871 - Tigger1 DNA MER2_type -335 2083 1 2224 117 0 0 chr17 33193753 33194061 -52244419 + AluSg SINE Alu 1 308 -2 2324 205 46 52 chr17 33194322 33195140 -52243340 + LTR28 LTR ERV1 1 1473 -141 394 254 14 72 chr17 33195140 33195278 -52243202 + MER52A LTR ERV1 1597 1726 -29 618 293 60 57 chr17 33195669 33195877 -52242603 - L1ME4a LINE L1 -111 6010 5804 1520 170 21 21 chr17 33195877 33196160 -52242320 + AluJb SINE Alu 7 289 -23 618 293 60 57 chr17 33196160 33196480 -52242000 - L1ME4a LINE L1 -317 5804 5480 265 317 61 20 chr17 33196794 33196947 -52241533 - MIR SINE MIR -1 261 103 3613 65 2 0 chr17 33197912 33198355 -52240125 + MLT2A1 LTR ERVL 1 444 0 202 248 191 19 chr17 33198476 33198581 -52239899 + MIR SINE MIR 13 135 -127 6998 66 6 3 chr17 33198788 33199889 -52238591 - L1PA8 LINE L1 0 6172 5074 2723 145 7 0 chr17 33200457 33200898 -52237582 + L1PB3 LINE L1 5711 6154 0 3699 118 8 2 chr17 33200919 33201443 -52237037 - MER1A DNA MER1_type 0 527 1 189 0 0 0 chr17 33202769 33202790 -52235690 + (T)n Simple_repeat Simple_repeat 1 21 0 3029 80 57 7 chr17 33204089 33204129 -52234351 - MLT2A1 LTR ERVL 0 444 407 355 52 35 0 chr17 33204129 33204187 -52234293 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 3029 80 57 7 chr17 33204187 33204569 -52233911 - MLT2A1 LTR ERVL -37 407 1 3913 60 6 23 chr17 33204569 33205088 -52233392 - HERVL-A1 LTR ERVL 0 5654 5145 * 17793 58 17 0 chr17 33205085 33207222 -52231258 - HERVL-A1 LTR ERVL -991 4663 2491 6980 119 17 35 chr17 33207220 33208594 -52229886 - HERVL-A1 LTR ERVL -4412 1352 1 * 1700 95 32 17 chr17 33208594 33208940 -52229540 - MLT2A1 LTR ERVL 0 444 1 495 240 68 36 chr17 33209048 33209292 -52229188 - MER41B LTR ERV1 -205 430 53 332 149 75 0 chr17 33209874 33209941 -52228539 + MIR SINE MIR 107 178 -84 1928 167 3 0 chr17 33209965 33210282 -52228198 - 7SLRNA srpRNA srpRNA 0 320 3 191 275 50 50 chr17 33210287 33210367 -52228113 + MIR SINE MIR 175 254 -8 1188 188 140 45 chr17 33210687 33210915 -52227565 + MER2 DNA MER2_type 2 270 -75 1606 186 13 3 chr17 33210915 33211221 -52227259 - AluJo SINE Alu -3 309 1 1188 188 140 45 chr17 33211221 33211306 -52227174 + MER2 DNA MER2_type 270 345 0 1896 177 97 40 chr17 33212593 33213068 -52225412 - MLT1D LTR MaLR 0 505 4 1054 138 24 48 chr17 33213238 33213448 -52225032 + MER3 DNA MER1_type 5 209 0 450 269 77 28 chr17 33213784 33213966 -52224514 + MIR3 SINE MIR 14 204 -4 245 269 154 0 chr17 33214172 33214250 -52224230 - MIR SINE MIR -65 197 108 340 335 105 7 chr17 33214269 33214421 -52224059 - MIR SINE MIR -33 229 63 375 292 39 67 chr17 33214551 33214729 -52223751 + MIR SINE MIR 90 262 0 282 293 24 24 chr17 33215292 33215415 -52223065 - L3 LINE CR1 -163 1414 1292 408 301 121 12 chr17 33216085 33216251 -52222229 - MIR3 SINE MIR -9 199 16 588 272 86 39 chr17 33217163 33217395 -52221085 - MIR SINE MIR -15 247 5 1452 196 11 4 chr17 33217668 33217983 -52220497 + AluJb SINE Alu 1 317 0 6767 78 2 14 chr17 33218318 33219778 -52218702 + L1PA15 LINE L1 4728 6162 -3 217 238 238 10 chr17 33220158 33220259 -52218221 - L2 LINE L2 -5 3267 3144 288 320 22 90 chr17 33220829 33221007 -52217473 + L2 LINE L2 3028 3193 -79 254 284 147 0 chr17 33221570 33221665 -52216815 - MIR SINE MIR -70 138 30 231 306 0 0 chr17 33222366 33222428 -52216052 - L2 LINE L2 -8 3305 3244 2135 114 0 3 chr17 33222514 33222811 -52215669 + AluSx SINE Alu 1 296 -16 343 228 59 20 chr17 33222825 33222926 -52215554 - L1ME4a LINE L1 -4 6117 6013 278 261 31 46 chr17 33223016 33223146 -52215334 - L1ME4a LINE L1 -279 5842 5715 830 297 18 4 chr17 33223278 33223507 -52214973 - MIR SINE MIR 0 262 31 2081 98 3 46 chr17 33223682 33224008 -52214472 + AluSx SINE Alu 1 312 0 364 355 82 57 chr17 33224242 33224425 -52214055 - L2 LINE L2 -463 2851 2674 1784 135 0 21 chr17 33224425 33224870 -52213610 + AluSx SINE Alu 1 439 0 364 355 82 57 chr17 33224870 33225171 -52213309 - L2 LINE L2 -640 2674 2352 828 71 47 24 chr17 33225835 33226004 -52212476 + CT-rich Low_complexity Low_complexity 2 174 0 1995 108 27 3 chr17 33226106 33226403 -52212077 - AluSx SINE Alu -4 308 5 261 57 0 0 chr17 33226482 33226517 -52211963 + (TG)n Simple_repeat Simple_repeat 2 36 0 1083 112 0 0 chr17 33226517 33226669 -52211811 - L1PA13 LINE L1 -15 6148 5997 311 322 11 0 chr17 33226756 33226846 -52211634 - L2 LINE L2 0 3272 3182 188 150 75 25 chr17 33227287 33227327 -52211153 + MIR SINE MIR 157 198 -64 697 302 40 9 chr17 33227359 33227581 -52210899 + MIR SINE MIR 33 261 -1 532 301 48 99 chr17 33229061 33229626 -52208854 - L1ME4a LINE L1 -8 6113 5578 25 65 0 0 chr17 33231827 33231873 -52206607 + AT_rich Low_complexity Low_complexity 1 46 0 517 337 20 25 chr17 33232415 33232617 -52205863 - MIR SINE MIR -49 213 13 276 253 50 30 chr17 33232754 33232853 -52205627 + MER5B DNA MER1_type 78 178 0 395 259 82 120 chr17 33233290 33233782 -52204698 + L1ME4a LINE L1 5606 6081 -40 198 0 0 0 chr17 33234001 33234023 -52204457 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 462 36 0 0 chr17 33234022 33234078 -52204402 + (CA)n Simple_repeat Simple_repeat 1 56 0 2305 101 3 3 chr17 33234654 33234962 -52203518 - AluSg SINE Alu -2 308 1 594 194 103 24 chr17 33235447 33235612 -52202868 + MER5A DNA MER1_type 11 188 -1 585 265 75 46 chr17 33236888 33237194 -52201286 - L1ME4a LINE L1 -225 5896 5582 393 343 0 0 chr17 33239904 33240041 -52198439 - MIR SINE MIR -77 185 49 2051 129 3 0 chr17 33240192 33240508 -52197972 - AluSx SINE Alu 0 317 1 772 296 9 0 chr17 33240701 33240921 -52197559 + MER58A DNA MER1_type 3 224 0 344 316 97 45 chr17 33241112 33241220 -52197260 + L1MC4a LINE L1 5563 5664 -2144 2038 134 3 0 chr17 33241220 33241510 -52196970 + AluSx SINE Alu 1 291 -21 344 316 97 45 chr17 33241510 33241689 -52196791 + L1MC4a LINE L1 5664 5865 -1943 309 26 0 0 chr17 33242218 33242256 -52196224 + (CA)n Simple_repeat Simple_repeat 2 39 0 357 252 89 16 chr17 33242701 33242912 -52195568 + MLT1J2 LTR MaLR 63 330 -120 748 245 27 0 chr17 33242918 33243102 -52195378 + MER5A DNA MER1_type 1 189 0 1786 164 3 14 chr17 33243529 33243821 -52194659 + AluJo SINE Alu 2 290 -22 317 365 54 0 chr17 33244084 33244232 -52194248 - MER91A DNA MER1_type -2 194 39 410 250 0 10 chr17 33244321 33244417 -52194063 + MER94 DNA DNA 40 134 0 2226 101 3 0 chr17 33244954 33245264 -52193216 + AluSq SINE Alu 1 311 0 497 281 79 101 chr17 33245664 33245700 -52192780 + MLT1K LTR MaLR 182 217 -371 1283 189 30 107 chr17 33245700 33246065 -52192415 - MER58B DNA MER1_type -4 337 1 497 281 79 101 chr17 33246065 33246444 -52192036 + MLT1K LTR MaLR 217 588 0 2283 131 39 152 chr17 33246962 33247548 -52190932 - MLT2B1 LTR ERVL 0 520 1 776 198 12 12 chr17 33247902 33248074 -52190406 + MER5B DNA MER1_type 1 172 -6 620 154 231 19 chr17 33248205 33248361 -52190119 - MER53 DNA DNA 0 189 1 1016 74 27 20 chr17 33250750 33250899 -52187581 - L1PA13 LINE L1 0 6163 6014 1502 166 63 46 chr17 33251197 33251481 -52186999 + AluJo SINE Alu 1 289 -23 372 307 27 27 chr17 33251524 33251674 -52186806 - MLT1L LTR MaLR -124 491 342 1951 184 17 14 chr17 33252183 33252530 -52185950 - MER7A DNA MER2_type 0 346 1 377 303 43 19 chr17 33252631 33252650 -52185830 - L1ME LINE L1 -373 5748 5731 2199 135 0 0 chr17 33252650 33252947 -52185533 - AluSx SINE Alu -15 297 1 377 303 43 19 chr17 33252947 33253089 -52185391 - L1ME LINE L1 -390 5731 5583 411 316 51 0 chr17 33254929 33255125 -52183355 + L1MEc LINE L1 1597 1802 -4594 633 260 43 25 chr17 33256434 33256669 -52181811 - L1ME LINE L1 -983 5163 4925 1211 206 97 77 chr17 33256698 33257101 -52181379 - MLT2B1 LTR ERVL 0 520 110 230 270 40 0 chr17 33257108 33257182 -52181298 - L1ME LINE L1 -1312 4834 4758 1830 278 55 48 chr17 33257183 33257320 -52181160 - HERV16 LTR ERVL -2077 2919 2784 2444 97 3 0 chr17 33257320 33257631 -52180849 - AluSp SINE Alu -1 312 1 1830 278 55 48 chr17 33257631 33258206 -52180274 - HERV16 LTR ERVL -2212 2784 2202 1769 288 37 61 chr17 33258204 33258954 -52179526 - HERV16 LTR ERVL -3444 1552 821 * 225 316 44 37 chr17 33258986 33259122 -52179358 + L1ME3A LINE L1 3507 3643 -2572 426 235 25 0 chr17 33259123 33259242 -52179238 + L1ME3A LINE L1 4957 5078 -1137 559 209 0 0 chr17 33259341 33259451 -52179029 + AluSg/x SINE Alu 198 307 -3 1040 229 33 33 chr17 33259454 33259786 -52178694 + L1ME3A LINE L1 5119 5450 -765 1519 204 152 18 chr17 33259846 33260288 -52178192 + MLT1D LTR MaLR 1 501 -4 913 277 127 3 chr17 33260326 33260633 -52177847 + MLT1H1 LTR MaLR 10 354 -201 2513 85 0 0 chr17 33260946 33261252 -52177228 - AluSc SINE Alu -3 306 1 314 281 21 0 chr17 33263863 33263959 -52174521 - MIR SINE MIR -87 121 24 400 269 39 8 chr17 33265199 33265329 -52173151 + MIR3 SINE MIR 60 193 -15 2112 109 6 67 chr17 33265456 33265786 -52172694 + AluSg SINE Alu 1 310 0 561 273 10 68 chr17 33266192 33266397 -52172083 + MER91A DNA MER1_type 1 193 -3 338 247 53 146 chr17 33266666 33266913 -52171567 + L2 LINE L2 3031 3254 -18 1755 188 47 52 chr17 33267250 33267292 -52171188 + L1ME3A LINE L1 5763 5804 -435 2500 85 3 0 chr17 33267292 33267599 -52170881 + AluSp SINE Alu 1 308 -5 1755 188 47 52 chr17 33267599 33268045 -52170435 + L1ME3A LINE L1 5804 6232 -7 2755 125 9 24 chr17 33268219 33268589 -52169891 + L1MB4 LINE L1 5454 5817 -363 2383 102 0 0 chr17 33268589 33268893 -52169587 + AluY SINE Alu 2 305 -6 2755 125 9 24 chr17 33268893 33268977 -52169503 + L1MB4 LINE L1 5817 5901 -279 739 259 94 43 chr17 33268977 33269305 -52169175 - L1M4 LINE L1 -1236 4910 4566 309 236 28 0 chr17 33269333 33269405 -52169075 - MIR SINE MIR -112 150 77 819 127 56 0 chr17 33269738 33269864 -52168616 + FLAM_C SINE Alu 1 133 0 2119 97 0 0 chr17 33269888 33270157 -52168323 - AluY SINE Alu -16 295 27 2419 79 26 3 chr17 33270208 33270511 -52167969 - AluSg SINE Alu 0 310 1 313 301 115 6 chr17 33270691 33270847 -52167633 + MLT1K LTR MaLR 23 195 -393 4296 123 13 0 chr17 33271340 33271967 -52166513 + MER41B LTR ERV1 1 635 0 1961 100 4 0 chr17 33272813 33273064 -52165416 + AluSg SINE Alu 46 297 -13 686 272 130 0 chr17 33274138 33274377 -52164103 - L2 LINE L2 -2025 1289 1020 1907 162 0 0 chr17 33274384 33274681 -52163799 - AluJb SINE Alu -13 299 3 375 284 28 0 chr17 33274744 33274853 -52163627 + MIR3 SINE MIR 47 158 -50 2388 86 0 6 chr17 33274979 33275011 -52163469 - AluY SINE Alu 0 311 280 189 0 0 0 chr17 33275011 33275032 -52163448 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2388 86 0 6 chr17 33275032 33275312 -52163168 - AluY SINE Alu -31 280 1 414 217 0 0 chr17 33275504 33275596 -52162884 + MER5A DNA MER1_type 13 104 -85 216 195 0 0 chr17 33276226 33276267 -52162213 - L2 LINE L2 -216 3056 3016 261 238 11 17 chr17 33276310 33276491 -52161989 + (CA)n Simple_repeat Simple_repeat 1 180 0 293 258 0 0 chr17 33276511 33276577 -52161903 + (CA)n Simple_repeat Simple_repeat 1 66 0 1636 172 3 20 chr17 33276701 33277004 -52161476 + AluSx SINE Alu 1 298 -14 282 271 143 14 chr17 33277053 33277193 -52161287 + MIR3 SINE MIR 34 191 -17 3105 159 104 18 chr17 33277444 33278060 -52160420 - L1MB8 LINE L1 -5 6173 5505 2262 109 0 22 chr17 33278069 33278381 -52160099 - AluSx SINE Alu -7 305 1 2319 98 3 0 chr17 33278570 33278865 -52159615 - AluSp SINE Alu -17 296 1 2163 125 3 7 chr17 33279525 33279828 -52158652 - AluSx SINE Alu -10 302 1 1847 168 3 3 chr17 33280049 33280347 -52158133 + AluSx SINE Alu 1 298 -14 974 312 81 6 chr17 33280590 33281104 -52157376 + L1ME4a LINE L1 5320 5905 -216 30 27 0 0 chr17 33281240 33281277 -52157203 + AT_rich Low_complexity Low_complexity 1 37 0 2480 53 0 0 chr17 33281346 33281653 -52156827 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 33281776 33281804 -52156676 + AT_rich Low_complexity Low_complexity 1 28 0 1029 127 0 0 chr17 33282056 33282198 -52156282 + FLAM_C SINE Alu 1 142 -1 325 294 0 0 chr17 33282199 33282284 -52156196 - MLT1I LTR MaLR -245 164 80 1270 235 97 81 chr17 33282294 33282694 -52155786 + HAL1 LINE L1 853 1245 -1262 2098 126 0 10 chr17 33282694 33282996 -52155484 - AluSx SINE Alu -13 299 1 1270 235 97 81 chr17 33282996 33283396 -52155084 + HAL1 LINE L1 1245 1666 -841 877 192 28 0 chr17 33283479 33283656 -52154824 + AluJo SINE Alu 121 302 -10 519 257 145 29 chr17 33283799 33284175 -52154305 + L1M4 LINE L1 2750 3159 -2987 360 0 0 0 chr17 33284426 33284466 -52154014 + (CA)n Simple_repeat Simple_repeat 2 41 0 380 222 0 0 chr17 33284475 33284547 -52153933 - MIR SINE MIR -32 230 159 1443 190 10 60 chr17 33284548 33284848 -52153632 - AluJo SINE Alu -22 290 6 619 253 25 70 chr17 33284858 33285016 -52153464 - MIR SINE MIR -111 151 1 287 282 18 27 chr17 33285213 33285323 -52153157 - L1MC4a LINE L1 -1884 5924 5816 2424 58 0 14 chr17 33285544 33285835 -52152645 - AluY SINE Alu -24 287 1 1340 113 10 39 chr17 33286235 33286438 -52152042 + AluSg/x SINE Alu 97 293 -19 27 0 0 0 chr17 33287393 33287420 -52151060 + AT_rich Low_complexity Low_complexity 1 27 0 382 241 52 9 chr17 33287738 33287854 -52150626 + MARNA DNA Mariner 269 389 -197 2105 133 13 0 chr17 33287860 33288168 -52150312 + AluSx SINE Alu 1 312 0 25 31 0 0 chr17 33288457 33288489 -52149991 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 33288583 33288606 -52149874 + AT_rich Low_complexity Low_complexity 1 23 0 515 247 153 40 chr17 33288822 33289045 -52149435 + MIR SINE MIR 9 256 -6 333 0 0 0 chr17 33289873 33289910 -52148570 + (TG)n Simple_repeat Simple_repeat 2 38 0 204 125 0 0 chr17 33289910 33289942 -52148538 + (TA)n Simple_repeat Simple_repeat 2 33 0 1956 248 39 12 chr17 33290482 33290991 -52147489 + MER90 LTR ERV1 9 531 -44 318 302 50 96 chr17 33291013 33291314 -52147166 - HAL1b LINE L1 -854 494 208 339 25 0 0 chr17 33291635 33291675 -52146805 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2249 90 0 0 chr17 33291681 33291959 -52146521 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 33292283 33292313 -52146167 + AT_rich Low_complexity Low_complexity 1 30 0 957 135 0 0 chr17 33292979 33293112 -52145368 - FLAM_C SINE Alu 0 133 1 2102 162 0 0 chr17 33293266 33293575 -52144905 + AluSx SINE Alu 1 309 -3 1698 188 0 30 chr17 33293603 33293906 -52144574 + AluJo SINE Alu 1 294 -18 2167 114 0 20 chr17 33293908 33294206 -52144274 + AluSx SINE Alu 1 292 -20 2385 81 0 0 chr17 33294800 33295097 -52143383 - AluY SINE Alu -14 297 1 258 106 0 0 chr17 33296284 33296331 -52142149 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 2268 101 0 13 chr17 33298299 33298607 -52139873 + AluSq SINE Alu 1 304 -9 1279 189 3 106 chr17 33298953 33299275 -52139205 - AluSg1 SINE Alu -20 289 1 1544 198 3 35 chr17 33299305 33299593 -52138887 - AluJb SINE Alu -33 279 1 21 71 0 0 chr17 33299623 33299665 -52138815 + AT_rich Low_complexity Low_complexity 1 42 0 832 193 0 7 chr17 33300083 33300228 -52138252 + FRAM SINE Alu 2 145 -31 1358 116 0 0 chr17 33300276 33300448 -52138032 + AluSx SINE Alu 3 174 -138 363 109 0 0 chr17 33300454 33300509 -52137971 + AluSc SINE Alu 245 299 0 2363 74 10 7 chr17 33301131 33301427 -52137053 + AluSp SINE Alu 1 297 -16 260 306 148 9 chr17 33304248 33304356 -52134124 - MIR3 SINE MIR -2 206 84 1706 204 18 98 chr17 33304602 33305078 -52133402 + L1MC3 LINE L1 7315 7749 -36 2481 61 0 0 chr17 33305078 33305372 -52133108 - AluY SINE Alu -17 294 1 1706 204 18 98 chr17 33305372 33305405 -52133075 + L1MC3 LINE L1 7749 7783 -2 2248 99 0 0 chr17 33305405 33305687 -52132793 - AluSq SINE Alu -31 282 1 272 125 0 0 chr17 33305687 33305735 -52132745 + L1MD3 LINE L1 7947 7994 -1 227 200 0 31 chr17 33305842 33305907 -52132573 + GA-rich Low_complexity Low_complexity 4 66 0 1710 181 7 3 chr17 33305961 33306254 -52132226 + AluJb SINE Alu 1 294 -18 1890 162 27 74 chr17 33306267 33306712 -52131768 + L1MB7 LINE L1 5748 6171 -13 186 271 21 0 chr17 33306743 33306791 -52131689 - L2 LINE L2 -80 3192 3144 284 336 106 0 chr17 33306817 33306921 -52131559 + L2 LINE L2 3140 3254 -18 1352 163 117 4 chr17 33306995 33307291 -52131189 - AluJo SINE Alu 0 325 1 217 274 163 7 chr17 33308181 33308316 -52130164 + MIR SINE MIR 77 232 -30 588 139 150 139 chr17 33309029 33309070 -52129410 + MER53 DNA DNA 1 40 -149 2368 94 0 0 chr17 33309070 33309369 -52129111 + AluSg SINE Alu 1 299 -11 588 139 150 139 chr17 33309369 33309514 -52128966 + MER53 DNA DNA 40 189 0 1778 78 4 16 chr17 33310689 33310931 -52127549 + AluSq SINE Alu 1 239 -74 742 56 11 0 chr17 33310932 33311022 -52127458 + AluSg/x SINE Alu 201 291 -21 427 237 127 25 chr17 33311600 33311718 -52126762 - MIR SINE MIR -122 140 11 2237 87 10 3 chr17 33311752 33312041 -52126439 + AluSc SINE Alu 1 291 -18 403 310 80 103 chr17 33312044 33312590 -52125890 - L2 LINE L2 -93 3179 2641 579 246 54 6 chr17 33312706 33312873 -52125607 - HAL1 LINE L1 -758 1749 1575 6174 147 37 25 chr17 33312898 33314681 -52123799 + L1PB2 LINE L1 4357 6144 -7 416 121 0 30 chr17 33314691 33314757 -52123723 - HAL1 LINE L1 -917 1590 1527 583 276 107 5 chr17 33314830 33315026 -52123454 + L2 LINE L2 2865 3080 -233 22 0 0 0 chr17 33315044 33315066 -52123414 + AT_rich Low_complexity Low_complexity 1 22 0 829 141 47 8 chr17 33315086 33315214 -52123266 + FLAM_A SINE Alu 1 133 0 1139 260 55 33 chr17 33315296 33316020 -52122460 + L1ME LINE L1 4931 5681 -481 180 0 0 0 chr17 33316183 33316203 -52122277 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 6363 99 30 0 chr17 33316203 33317202 -52121278 - L1PA10 LINE L1 -21 6147 5123 * 13883 121 9 3 chr17 33317199 33319308 -52119172 + L1P LINE L1 2514 4636 -1510 11331 111 18 42 chr17 33319680 33320354 -52118126 - Tigger1 DNA MER2_type -637 1781 1092 2172 97 0 10 chr17 33320354 33320652 -52117828 + AluSg1 SINE Alu 15 309 0 11331 111 18 42 chr17 33320652 33321779 -52116701 - Tigger1 DNA MER2_type -1326 1092 24 276 330 97 0 chr17 33321817 33321920 -52116560 + L2 LINE L2 3144 3256 -16 186 133 17 50 chr17 33321978 33322038 -52116442 + T-rich Low_complexity Low_complexity 2 59 0 1181 173 0 0 chr17 33322311 33322502 -52115978 + AluJo SINE Alu 3 193 -119 367 126 46 92 chr17 33322528 33322543 -52115937 - MER5A DNA MER1_type -97 92 78 2366 105 0 0 chr17 33322543 33322849 -52115631 - AluSx SINE Alu -5 307 2 367 126 46 92 chr17 33322849 33322920 -52115560 - MER5A DNA MER1_type -111 78 10 299 209 171 19 chr17 33323284 33323389 -52115091 - L2 LINE L2 -2 3311 3191 589 280 0 13 chr17 33324159 33324316 -52114164 + MIR SINE MIR 108 262 0 197 369 77 31 chr17 33324335 33324465 -52114015 + L2 LINE L2 3121 3256 -16 1340 164 0 9 chr17 33324467 33324687 -52113793 - AluJo SINE Alu -8 304 87 410 216 52 35 chr17 33324829 33324945 -52113535 - MIR3 SINE MIR -14 194 77 289 303 197 11 chr17 33325089 33325277 -52113203 + MIR SINE MIR 13 235 -27 538 276 100 35 chr17 33325528 33325789 -52112691 + L2 LINE L2 3032 3309 -4 317 143 0 16 chr17 33327843 33327906 -52110574 + (TC)n Simple_repeat Simple_repeat 1 62 0 3628 113 64 9 chr17 33329337 33329869 -52108611 + L1PA16 LINE L1 5606 6166 0 789 167 7 43 chr17 33330005 33330143 -52108337 - FLAM_C SINE Alu 0 133 1 23 0 0 0 chr17 33330156 33330179 -52108301 + AT_rich Low_complexity Low_complexity 1 23 0 263 250 31 0 chr17 33330223 33330287 -52108193 - L2 LINE L2 0 3313 3248 389 326 14 21 chr17 33330879 33331023 -52107457 + MIR3 SINE MIR 49 191 -17 * 574 280 43 38 chr17 33330990 33331176 -52107304 + L2 LINE L2 2904 3090 -182 3792 147 15 16 chr17 33331224 33331829 -52106651 - Tigger1 DNA MER2_type 0 2418 1815 268 207 17 0 chr17 33332455 33332513 -52105967 + MER20 DNA MER1_type 161 219 0 254 283 35 35 chr17 33332950 33333063 -52105417 + L2 LINE L2 2251 2363 -951 1061 210 14 5 chr17 33333090 33333304 -52105176 + MER20 DNA MER1_type 4 219 0 907 270 128 16 chr17 33333327 33333890 -52104590 + L2 LINE L2 2708 3313 0 833 148 0 52 chr17 33334014 33334149 -52104331 - FLAM_A SINE Alu -5 128 1 2379 206 28 59 chr17 33334160 33334278 -52104202 - L1MB7 LINE L1 -11 6173 6053 2226 131 0 3 chr17 33334278 33334591 -52103889 - AluSx SINE Alu 0 312 1 2379 206 28 59 chr17 33334591 33334953 -52103527 - L1MB7 LINE L1 -131 6053 5723 2027 121 46 26 chr17 33334953 33335259 -52103221 + AluSx SINE Alu 1 312 0 2379 206 28 59 chr17 33335259 33335484 -52102996 - L1MB7 LINE L1 -461 5723 5493 415 204 46 28 chr17 33335591 33335699 -52102781 + MER5B DNA MER1_type 55 164 -14 208 245 0 0 chr17 33336975 33337024 -52101456 + MIR3 SINE MIR 140 188 -20 2524 67 0 0 chr17 33337040 33337340 -52101140 - AluY SINE Alu -11 300 1 1607 122 45 4 chr17 33337346 33337592 -52100888 - AluSx SINE Alu -23 289 34 316 229 35 27 chr17 33337781 33337932 -52100548 + MIR3 SINE MIR 11 160 -62 2385 75 0 3 chr17 33338002 33338295 -52100185 - AluY SINE Alu -14 297 6 645 190 16 0 chr17 33338330 33338451 -52100029 + AluSg/x SINE Alu 187 309 -1 384 97 0 0 chr17 33338451 33338513 -52099967 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 609 222 96 0 chr17 33338516 33338651 -52099829 - LTR16C LTR ERVL -51 440 293 204 241 130 28 chr17 33339080 33339188 -52099292 + MIR SINE MIR 128 246 -16 864 115 0 0 chr17 33339907 33340029 -52098451 - L1MB1 LINE L1 -296 5893 5772 304 240 171 0 chr17 33340029 33340158 -52098322 + L1ME4a LINE L1 5754 5904 -217 188 259 86 12 chr17 33340375 33340456 -52098024 - MIR SINE MIR -79 129 43 265 289 134 7 chr17 33340797 33340939 -52097541 - MIR SINE MIR -56 206 47 217 310 163 8 chr17 33341384 33341513 -52096967 - MIR3 SINE MIR -17 191 43 978 102 5 133 chr17 33342375 33342571 -52095909 + AluJb SINE Alu 1 171 -141 705 191 67 52 chr17 33342603 33342797 -52095683 + AluJb SINE Alu 97 293 -19 434 250 83 8 chr17 33342866 33342998 -52095482 - MIR SINE MIR -75 187 46 317 269 245 18 chr17 33343145 33343431 -52095049 - L2 LINE L2 -159 3154 2804 1388 158 90 43 chr17 33343435 33343713 -52094767 - AluJo SINE Alu -16 296 6 239 216 0 0 chr17 33343720 33343771 -52094709 - L2 LINE L2 -515 2799 2749 1294 126 0 0 chr17 33344444 33344626 -52093854 + AluSg/x SINE Alu 128 309 -1 3477 140 29 8 chr17 33344774 33345457 -52093023 + L1MA4A LINE L1 5163 5857 -446 307 106 0 0 chr17 33345574 33345621 -52092859 + Alu SINE Alu 251 297 -4 694 157 0 0 chr17 33346486 33346594 -52091886 + Tigger2a DNA MER2_type 1 108 -326 1585 104 14 0 chr17 33346694 33346905 -52091575 + AluSg/x SINE Alu 90 303 -9 579 286 94 5 chr17 33347334 33347547 -52090933 + MIR SINE MIR 13 244 -18 925 206 0 0 chr17 33347698 33347863 -52090617 + FRAM SINE Alu 1 161 -15 1633 186 0 0 chr17 33347918 33348208 -52090272 - AluSq SINE Alu -23 290 1 606 221 0 26 chr17 33348313 33348498 -52089982 + AluY SINE Alu 132 312 0 1862 170 3 0 chr17 33348540 33348823 -52089657 + AluJo SINE Alu 3 286 -26 374 196 21 7 chr17 33348823 33348966 -52089514 + (TA)n Simple_repeat Simple_repeat 1 145 0 312 262 19 58 chr17 33348967 33349070 -52089410 + L2 LINE L2 3174 3272 0 188 321 45 90 chr17 33349086 33349220 -52089260 + L2 LINE L2 2924 3051 -221 294 122 0 0 chr17 33349677 33349718 -52088762 - Alu SINE Alu -260 41 1 253 272 33 22 chr17 33349720 33349812 -52088668 - L1MC/D LINE L1 -2145 5663 5571 1525 171 4 11 chr17 33349820 33350083 -52088397 - AluJb SINE Alu -18 294 34 2289 80 0 7 chr17 33350208 33350518 -52087962 + AluY SINE Alu 1 308 0 2234 103 7 3 chr17 33350583 33350883 -52087597 + AluSq SINE Alu 1 301 -12 2259 89 0 3 chr17 33351288 33351579 -52086901 + AluSg SINE Alu 6 295 -15 421 277 66 15 chr17 33351587 33351724 -52086756 + MIR SINE MIR 48 191 -71 1527 144 134 25 chr17 33351761 33352038 -52086442 - AluJb SINE Alu -5 307 1 455 267 95 70 chr17 33352039 33352166 -52086314 - L1ME4a LINE L1 -276 5845 5723 1936 111 52 0 chr17 33352166 33352480 -52086000 - AluSq SINE Alu 0 328 1 455 267 95 70 chr17 33352480 33352501 -52085979 - L1ME4a LINE L1 -398 5723 5704 2289 109 3 0 chr17 33352501 33352803 -52085677 - AluSp SINE Alu -10 303 1 455 267 95 70 chr17 33352803 33352937 -52085543 - L1ME4a LINE L1 -417 5704 5554 584 159 0 0 chr17 33352984 33353072 -52085408 + AluJ/FLAM SINE Alu 2 89 -223 1990 141 3 3 chr17 33353305 33353630 -52084850 - AluSx SINE Alu 0 312 1 233 292 142 26 chr17 33353946 33354059 -52084421 + MIR SINE MIR 32 157 -105 30 77 0 0 chr17 33354059 33354124 -52084356 + AT_rich Low_complexity Low_complexity 1 65 0 186 43 0 0 chr17 33357633 33357656 -52080824 + (TC)n Simple_repeat Simple_repeat 2 24 0 210 109 22 22 chr17 33358554 33358600 -52079880 + A-rich Low_complexity Low_complexity 1 46 0 281 240 27 13 chr17 33359513 33359588 -52078892 + MLT1K LTR MaLR 509 584 -4 194 91 30 0 chr17 33360302 33360335 -52078145 + (CA)n Simple_repeat Simple_repeat 2 35 0 256 266 127 0 chr17 33360381 33360460 -52078020 - MIR SINE MIR -115 147 59 2080 135 3 16 chr17 33361312 33361624 -52076856 - AluJb SINE Alu -4 308 1 2125 136 3 13 chr17 33361891 33362201 -52076279 - AluSx SINE Alu -4 308 2 572 219 67 49 chr17 33362919 33363031 -52075449 + MER5B DNA MER1_type 1 118 -60 2220 110 7 3 chr17 33363031 33363340 -52075140 - AluSq SINE Alu -3 310 1 572 219 67 49 chr17 33363340 33363391 -52075089 + MER5B DNA MER1_type 118 167 -11 1756 131 45 24 chr17 33363875 33364165 -52074315 - AluJb SINE Alu -16 296 1 589 284 12 12 chr17 33364859 33365028 -52073452 - MIR SINE MIR -60 202 34 745 211 105 14 chr17 33365308 33365517 -52072963 + L1MC4a LINE L1 5735 5962 -1846 308 176 147 29 chr17 33365588 33365690 -52072790 + L1MC4a LINE L1 6055 6168 -1640 2003 133 0 23 chr17 33365877 33366015 -52072465 + AluSq SINE Alu 1 141 -172 2246 115 0 3 chr17 33366015 33366327 -52072153 + AluY SINE Alu 1 311 0 2003 133 0 23 chr17 33366327 33366490 -52071990 + AluSq SINE Alu 141 295 -18 2333 86 3 0 chr17 33366498 33366789 -52071691 + AluSx SINE Alu 6 297 -15 421 277 66 15 chr17 33366797 33366934 -52071546 + MIR SINE MIR 48 191 -71 1002 168 0 38 chr17 33366971 33367156 -52071324 - AluJb SINE Alu -5 307 130 3519 56 9 21 chr17 33367273 33367760 -52070720 + L1PA8A LINE L1 5667 6147 0 181 0 0 0 chr17 33367740 33367780 -52070700 + (CAA)n Simple_repeat Simple_repeat 2 41 0 289 295 133 0 chr17 33368019 33368124 -52070356 + MER5B DNA MER1_type 59 177 -1 1891 127 0 0 chr17 33370322 33370581 -52067899 - AluSx SINE Alu -5 307 49 617 254 44 16 chr17 33370581 33370785 -52067695 + MER51A LTR ERV1 1 336 -304 2139 124 3 0 chr17 33370949 33371247 -52067233 - AluSq SINE Alu -14 299 1 837 204 115 5 chr17 33371271 33371462 -52067018 + MER51C LTR ERV1 429 640 0 239 146 125 0 chr17 33371462 33371508 -52066972 - AluSx SINE Alu -251 52 1 2111 106 10 10 chr17 33371598 33371917 -52066563 + AluSc SINE Alu 1 309 0 187 342 70 26 chr17 33372256 33372370 -52066110 + L2 LINE L2 3122 3240 -32 2096 89 38 3 chr17 33373687 33373978 -52064502 + AluSc SINE Alu 3 303 -6 1472 198 0 14 chr17 33374053 33374331 -52064149 + AluJb SINE Alu 1 274 -38 1809 114 0 0 chr17 33374437 33374673 -52063807 - AluSq SINE Alu -76 237 2 27 49 0 0 chr17 33374683 33374724 -52063756 + AT_rich Low_complexity Low_complexity 1 41 0 2082 105 10 16 chr17 33374751 33375064 -52063416 - AluSx SINE Alu -1 311 1 1727 166 46 36 chr17 33375358 33375665 -52062815 - AluJb SINE Alu -2 310 1 187 325 152 26 chr17 33376079 33376131 -52062349 - L2 LINE L2 -5 3267 3223 2198 96 16 35 chr17 33376131 33376444 -52062036 + AluSq SINE Alu 1 307 -6 187 325 152 26 chr17 33376444 33376542 -52061938 - L2 LINE L2 -49 3223 3098 343 353 138 20 chr17 33376749 33377336 -52061144 - L2 LINE L2 -450 2864 2209 293 311 19 39 chr17 33377517 33377620 -52060860 + L2 LINE L2 3201 3301 -12 204 40 0 0 chr17 33377620 33377645 -52060835 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 2318 81 7 3 chr17 33377886 33378181 -52060299 + AluSp SINE Alu 2 297 -16 1540 186 53 21 chr17 33378404 33378689 -52059791 - AluJb SINE Alu -18 294 1 189 0 0 0 chr17 33379463 33379484 -52058996 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 2131 110 40 0 chr17 33379831 33380132 -52058348 + AluSq SINE Alu 1 313 0 2374 77 3 10 chr17 33381133 33381431 -52057049 - AluSc SINE Alu -13 296 1 22 35 0 0 chr17 33381475 33381504 -52056976 + AT_rich Low_complexity Low_complexity 1 29 0 1881 115 63 0 chr17 33381769 33382039 -52056441 - AluSx SINE Alu 0 312 26 652 112 10 0 chr17 33382656 33382783 -52055697 + AluSg/x SINE Alu 182 309 0 411 179 105 0 chr17 33382880 33382975 -52055505 + L1MC5 LINE L1 7004 7108 -853 * 2260 180 81 57 chr17 33382956 33383618 -52054862 + L1MD3 LINE L1 7359 8002 -10 2209 128 0 3 chr17 33383809 33384115 -52054365 + AluSx SINE Alu 1 305 -7 1739 191 10 3 chr17 33384215 33384514 -52053966 + AluJo SINE Alu 1 301 -11 32 26 0 0 chr17 33384588 33384627 -52053853 + AT_rich Low_complexity Low_complexity 1 39 0 1645 163 64 11 chr17 33384713 33384996 -52053484 + AluJb SINE Alu 1 298 -14 560 141 0 0 chr17 33384906 33384998 -52053482 + AluJb SINE Alu 209 300 -12 2424 157 83 9 chr17 33385217 33385559 -52052921 + L1M4 LINE L1 5088 5403 -775 2073 119 7 7 chr17 33385559 33385852 -52052628 + AluSx SINE Alu 1 293 -19 2279 97 7 3 chr17 33385855 33386153 -52052327 + AluSg SINE Alu 1 299 -11 2424 157 83 9 chr17 33386153 33386443 -52052037 + L1M4 LINE L1 5404 5770 -408 509 82 0 14 chr17 33386445 33386518 -52051962 + L1MB8 LINE L1 6101 6172 -6 336 301 95 16 chr17 33386754 33386965 -52051515 - MIR SINE MIR -39 223 1 2341 96 3 7 chr17 33386990 33387293 -52051187 - AluSx SINE Alu -10 302 1 2246 113 3 0 chr17 33387690 33387982 -52050498 - AluSx SINE Alu -19 293 1 246 86 0 0 chr17 33388336 33388371 -52050109 - Alu SINE Alu -267 35 1 817 128 0 0 chr17 33388373 33388498 -52049982 + AluSp/q SINE Alu 185 309 -4 780 152 15 15 chr17 33388502 33388634 -52049846 + FLAM_C SINE Alu 2 133 0 23 0 0 0 chr17 33388919 33388942 -52049538 + AT_rich Low_complexity Low_complexity 1 23 0 455 241 185 10 chr17 33391380 33391575 -52046905 - MIR SINE MIR -20 242 14 291 286 161 10 chr17 33391981 33392180 -52046300 - MIR SINE MIR 0 262 34 2346 82 17 3 chr17 33392511 33392805 -52045675 - AluSx SINE Alu -14 298 1 2082 125 0 19 chr17 33393745 33394058 -52044422 - AluSq SINE Alu -6 307 1 673 84 0 0 chr17 33394060 33394155 -52044325 - AluSp/q SINE Alu -4 309 215 1156 228 21 4 chr17 33394260 33394497 -52043983 - MLT1F LTR MaLR -291 251 11 321 288 63 78 chr17 33395707 33395862 -52042618 - L1ME LINE L1 -462 5659 5503 1661 137 49 53 chr17 33395862 33396172 -52042308 - AluJo SINE Alu 0 311 3 321 288 63 78 chr17 33396172 33396347 -52042133 - L1ME LINE L1 -618 5503 5332 294 240 240 10 chr17 33396580 33396684 -52041796 + L2 LINE L2 3181 3308 -5 2243 84 16 42 chr17 33397915 33398223 -52040257 - AluSx SINE Alu -11 301 2 262 222 0 0 chr17 33398935 33398989 -52039491 - L3 LINE CR1 -3 1574 1521 1458 174 71 0 chr17 33398989 33399271 -52039209 - AluJb SINE Alu -10 302 1 1554 103 4 39 chr17 33399941 33400165 -52038315 + AluJo SINE Alu 86 303 -9 324 0 0 0 chr17 33400165 33400201 -52038279 + (TA)n Simple_repeat Simple_repeat 2 37 0 193 204 23 0 chr17 33400230 33400274 -52038206 + MIR SINE MIR 74 118 -144 5474 199 102 38 chr17 33400319 33401021 -52037459 + L1M2a LINE L1 1259 1915 -5252 1966 162 0 13 chr17 33401021 33401336 -52037144 - AluJo SINE Alu -1 311 1 5474 199 102 38 chr17 33401336 33401611 -52036869 + L1M2a LINE L1 1915 2171 -4996 2066 154 0 0 chr17 33401611 33401917 -52036563 + AluSx SINE Alu 4 309 -3 5474 199 102 38 chr17 33401917 33403211 -52035269 + L1M2a LINE L1 2171 3754 -3413 2268 104 7 3 chr17 33404044 33404353 -52034127 + AluY SINE Alu 1 310 -1 22 56 0 0 chr17 33404497 33404533 -52033947 + AT_rich Low_complexity Low_complexity 1 36 0 2379 84 7 0 chr17 33404691 33404989 -52033491 + AluSp SINE Alu 1 300 -13 2558 56 0 7 chr17 33405284 33405588 -52032892 + AluY SINE Alu 1 302 -9 2235 115 0 0 chr17 33406248 33406553 -52031927 - AluSg SINE Alu 0 310 6 1852 137 13 47 chr17 33407908 33408208 -52030272 + AluSx SINE Alu 1 290 -22 256 233 0 0 chr17 33408221 33408281 -52030199 + AluJo SINE Alu 83 142 -160 2280 104 3 3 chr17 33408283 33408581 -52029899 + AluSc SINE Alu 1 298 -11 1693 189 4 0 chr17 33408595 33408876 -52029604 + AluJo SINE Alu 1 282 -30 261 0 0 0 chr17 33408879 33408908 -52029572 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 591 297 40 31 chr17 33408913 33408993 -52029487 + HAL1 LINE L1 1661 1739 -768 2108 125 3 23 chr17 33408993 33409297 -52029183 + AluSg SINE Alu 1 298 -12 591 297 40 31 chr17 33409297 33409438 -52029042 + HAL1 LINE L1 1739 1884 -623 2125 140 7 0 chr17 33409514 33409822 -52028658 - AluSx SINE Alu -2 310 1 210 37 0 0 chr17 33410368 33410395 -52028085 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2319 79 7 3 chr17 33411374 33411678 -52026802 + AluSq SINE Alu 1 305 -8 219 288 0 14 chr17 33412305 33412378 -52026102 + L2 LINE L2 3200 3271 -1 4459 99 26 2 chr17 33413717 33414342 -52024138 - MER51C LTR ERV1 0 640 1 398 112 26 0 chr17 33414342 33414418 -52024062 - MER51A LTR ERV1 -579 61 1 591 184 44 0 chr17 33414880 33414994 -52023486 - FLAM_A SINE Alu -11 131 13 345 169 51 0 chr17 33415258 33415317 -52023163 + AluJ/FLAM SINE Alu 1 62 -240 555 153 0 0 chr17 33415323 33415408 -52023072 - AluS SINE Alu -226 86 2 2202 110 0 16 chr17 33415717 33416025 -52022455 + AluSg SINE Alu 1 303 -7 1426 156 51 36 chr17 33416225 33416500 -52021980 - AluJo SINE Alu -33 279 1 3324 155 53 10 chr17 33416521 33417120 -52021360 - L1MB2 LINE L1 -7 6164 5540 1515 144 30 15 chr17 33417167 33417437 -52021043 + L1MA5 LINE L1 6027 6300 0 252 293 231 0 chr17 33417450 33417655 -52020825 - L1M4 LINE L1 -2108 4038 3882 4670 124 38 30 chr17 33417655 33418157 -52020323 - L1MA4 LINE L1 0 6300 5787 2054 143 7 0 chr17 33418157 33418465 -52020015 - AluJb SINE Alu -2 310 1 4670 124 38 30 chr17 33418465 33418795 -52019685 - L1MA4 LINE L1 -513 5787 5461 252 293 231 0 chr17 33418795 33418896 -52019584 - L1M4 LINE L1 -2264 3882 3661 2233 75 57 0 chr17 33419838 33420119 -52018361 + AluSx SINE Alu 1 297 -15 791 177 13 6 chr17 33420770 33420928 -52017552 - Charlie4 DNA MER1_type 0 1961 1803 891 206 65 32 chr17 33420952 33421199 -52017281 - Charlie4 DNA MER1_type -1705 256 2 1876 167 91 60 chr17 33421362 33421846 -52016634 + MLT1D LTR MaLR 5 503 -2 246 240 0 0 chr17 33422780 33422830 -52015650 + Alu SINE Alu 118 167 -141 1923 100 10 93 chr17 33423037 33423381 -52015099 - AluSx SINE Alu 0 319 2 731 255 222 5 chr17 33423381 33423769 -52014711 + L1ME4a LINE L1 5467 5938 -183 1877 143 10 27 chr17 33423947 33424248 -52014232 - AluJo SINE Alu -16 296 1 796 83 9 0 chr17 33425006 33425115 -52013365 - HY1 scRNA scRNA -1 111 2 654 293 71 4 chr17 33426565 33426790 -52011690 + MER112 DNA MER1_type 21 260 0 467 119 0 0 chr17 33426794 33426861 -52011619 - MER20 DNA MER1_type -4 215 149 * 1199 162 33 14 chr17 33426859 33427069 -52011411 + MER20 DNA MER1_type 6 219 0 2070 152 0 3 chr17 33427084 33427387 -52011093 + AluSx SINE Alu 1 302 -10 183 80 0 0 chr17 33427387 33427412 -52011068 + (GA)n Simple_repeat Simple_repeat 1 25 0 469 132 0 44 chr17 33428408 33428499 -52009981 + AluJ/FLAM SINE Alu 2 88 -224 829 120 8 16 chr17 33428600 33428725 -52009755 + FLAM_C SINE Alu 11 134 -9 1365 134 4 69 chr17 33429294 33429525 -52008955 - AluJb SINE Alu -12 300 85 330 151 0 0 chr17 33429731 33429784 -52008696 + Alu SINE Alu 243 295 -6 1676 181 19 29 chr17 33431086 33431400 -52007080 - AluJo SINE Alu -1 311 1 2067 127 21 0 chr17 33431426 33431717 -52006763 + AluSx SINE Alu 1 297 -15 1614 123 0 13 chr17 33432245 33432473 -52006007 - AluJb SINE Alu -7 305 81 593 222 4 126 chr17 33432509 33432748 -52005732 + AluJb SINE Alu 2 211 -101 246 278 28 0 chr17 33433760 33433832 -52004648 + MER116 DNA Mariner 1 74 -6 439 211 32 87 chr17 33434489 33434594 -52003886 + MER5A DNA MER1_type 14 106 -83 2686 27 0 0 chr17 33434594 33434891 -52003589 + AluY SINE Alu 1 297 -14 439 211 32 87 chr17 33434891 33434970 -52003510 + MER5A DNA MER1_type 106 188 -1 1715 151 35 21 chr17 33435225 33435509 -52002971 + AluJb SINE Alu 1 288 -24 1902 131 50 10 chr17 33436093 33436393 -52002087 + AluJb SINE Alu 1 309 -3 395 285 173 32 chr17 33436411 33436759 -52001721 - L2 LINE L2 -239 3033 2635 193 240 62 62 chr17 33437575 33437605 -52000875 - MIR SINE MIR -43 219 190 2226 88 7 0 chr17 33437605 33437899 -52000581 - AluSx SINE Alu -16 296 1 193 240 62 62 chr17 33437899 33437964 -52000516 - MIR SINE MIR -71 191 124 23 101 0 0 chr17 33438525 33438604 -51999876 + GC_rich Low_complexity Low_complexity 1 79 0 794 170 75 6 chr17 33439956 33440115 -51998365 + MER45A DNA AcHobo 9 178 0 5918 198 42 66 chr17 33440940 33441504 -51996976 + L1MA4 LINE L1 2860 3436 -2710 1797 191 116 16 chr17 33441504 33441892 -51996588 + MSTA LTR MaLR 1 427 -1 5918 198 42 66 chr17 33441892 33442316 -51996164 + L1MA4 LINE L1 3436 3869 -2277 2079 88 0 11 chr17 33442316 33442632 -51995848 + AluSc SINE Alu 1 313 0 5918 198 42 66 chr17 33442632 33443003 -51995477 + L1MA4 LINE L1 3869 4248 -1898 959 132 0 0 chr17 33443003 33443147 -51995333 + AluJb SINE Alu 154 297 -15 2349 87 0 0 chr17 33443149 33443459 -51995021 + AluSx SINE Alu 1 310 -2 5918 198 42 66 chr17 33443459 33443863 -51994617 + L1MA4 LINE L1 4249 4661 -1485 1090 170 277 0 chr17 33443863 33444098 -51994382 + AluJb SINE Alu 1 300 -2 5918 198 42 66 chr17 33444098 33444738 -51993742 + L1MA4 LINE L1 4661 5355 -791 914 138 12 12 chr17 33444735 33444902 -51993578 + L1MA4 LINE L1 5662 5828 -472 * 854 74 25 8 chr17 33444902 33445024 -51993456 + BC200 scRNA scRNA 17 140 -60 2753 115 50 9 chr17 33445037 33445499 -51992981 + L1MA4 LINE L1 5814 6294 -6 1536 193 0 13 chr17 33445602 33445902 -51992578 + AluJo SINE Alu 1 296 -16 238 258 65 129 chr17 33447699 33447823 -51990657 - L2 LINE L2 -15 3257 3142 21 0 0 0 chr17 33447943 33447964 -51990516 + AT_rich Low_complexity Low_complexity 1 21 0 954 96 0 15 chr17 33447964 33448100 -51990380 + AluY SINE Alu 1 134 -177 2084 68 7 11 chr17 33448100 33448381 -51990099 + AluY SINE Alu 1 280 -31 32 0 0 0 chr17 33448381 33448413 -51990067 + AT_rich Low_complexity Low_complexity 1 32 0 232 335 112 26 chr17 33448413 33448565 -51989915 + L3 LINE CR1 1350 1514 -63 216 0 0 0 chr17 33449636 33449660 -51988820 + (TA)n Simple_repeat Simple_repeat 2 25 0 2365 63 0 3 chr17 33449713 33450014 -51988466 + AluY SINE Alu 1 300 -11 852 270 71 15 chr17 33450097 33450434 -51988046 - L1ME LINE L1 -376 5786 5431 2243 95 0 7 chr17 33450669 33450973 -51987507 + AluSx SINE Alu 1 302 -10 1112 140 0 0 chr17 33450979 33451143 -51987337 + FRAM SINE Alu 1 156 -20 636 163 52 7 chr17 33451294 33451429 -51987051 + Charlie4 DNA MER1_type 1821 1961 0 2122 89 0 0 chr17 33452035 33452366 -51986114 - AluSc SINE Alu 0 331 1 369 228 121 54 chr17 33453714 33453863 -51984617 + L1ME1 LINE L1 5708 5866 -300 24 0 0 0 chr17 33454012 33454036 -51984444 + AT_rich Low_complexity Low_complexity 1 24 0 1171 179 15 5 chr17 33454249 33454450 -51984030 - MER20 DNA MER1_type -16 203 1 2215 97 0 0 chr17 33454453 33454753 -51983727 + AluSq SINE Alu 1 300 -13 470 208 180 55 chr17 33456326 33456491 -51981989 + MER58C DNA MER1_type 2 194 -2226 1782 96 0 4 chr17 33456491 33456741 -51981739 + AluSg1 SINE Alu 1 249 -60 470 208 180 55 chr17 33456741 33456758 -51981722 + MER58C DNA MER1_type 194 207 -8 2120 96 0 17 chr17 33458940 33459233 -51979247 + AluSq SINE Alu 5 292 -21 353 322 92 99 chr17 33459550 33459823 -51978657 + L2 LINE L2 2989 3259 -13 531 110 0 0 chr17 33460521 33460594 -51977886 + AluS SINE Alu 2 74 -239 2525 62 0 0 chr17 33460597 33460906 -51977574 - AluY SINE Alu -2 309 1 883 166 0 75 chr17 33461424 33461482 -51976998 - AluJo SINE Alu -139 173 112 2184 94 3 0 chr17 33461482 33461779 -51976701 + AluSq SINE Alu 1 298 -15 883 166 0 75 chr17 33461779 33461907 -51976573 - AluJo SINE Alu -200 112 1 22 35 0 0 chr17 33463135 33463164 -51975316 + GC_rich Low_complexity Low_complexity 1 29 0 1504 152 97 0 chr17 33464516 33464785 -51973695 + AluJb SINE Alu 1 295 -17 1970 123 3 3 chr17 33465226 33465519 -51972961 - AluSx SINE Alu -19 293 1 32 0 0 0 chr17 33465519 33465551 -51972929 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 33466284 33466307 -51972173 + AT_rich Low_complexity Low_complexity 1 23 0 233 169 17 0 chr17 33466570 33466629 -51971851 + (CA)n Simple_repeat Simple_repeat 2 61 0 207 167 0 37 chr17 33467354 33467408 -51971072 + A-rich Low_complexity Low_complexity 2 53 0 2220 100 0 0 chr17 33469272 33469571 -51968909 - AluSx SINE Alu -13 299 1 2127 102 30 0 chr17 33473650 33473953 -51964527 - AluSx SINE Alu 0 312 1 219 219 0 0 chr17 33476338 33476379 -51962101 + GA-rich Low_complexity Low_complexity 2 42 0 761 222 42 0 chr17 33478039 33478206 -51960274 + MER5B DNA MER1_type 1 174 -4 2280 99 0 0 chr17 33478517 33478819 -51959661 - AluSc SINE Alu -7 302 1 368 194 16 0 chr17 33478840 33478902 -51959578 - AluJb SINE Alu -19 283 221 455 219 0 0 chr17 33478902 33478984 -51959496 - AluJb SINE Alu -124 188 107 618 163 0 0 chr17 33479084 33479176 -51959304 - AluJ/FLAM SINE Alu -220 92 1 868 186 12 12 chr17 33479225 33479392 -51959088 + AluJb SINE Alu 137 303 -9 349 262 255 0 chr17 33480772 33480921 -51957559 - MIR SINE MIR -1 261 75 644 267 78 11 chr17 33481752 33481943 -51956537 + MIR SINE MIR 47 250 -12 2069 116 0 28 chr17 33482179 33482498 -51955982 - AluSx SINE Alu -2 310 1 645 287 17 21 chr17 33482736 33482973 -51955507 + L1MC4 LINE L1 7807 8042 0 194 324 27 27 chr17 33483617 33483691 -51954789 + MIR SINE MIR 16 89 -119 438 216 153 60 chr17 33486712 33486980 -51951500 - L1ME4a LINE L1 -81 6040 5748 4780 188 112 64 chr17 33487025 33488242 -51950238 - L1MC4 LINE L1 -5 8037 6880 2153 121 0 3 chr17 33488242 33488531 -51949949 - AluSq SINE Alu -25 288 1 4780 188 112 64 chr17 33488531 33488630 -51949850 - L1MC4 LINE L1 -1162 6880 6787 523 26 40 0 chr17 33488630 33488706 -51949774 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 4780 188 112 64 chr17 33488706 33488850 -51949630 - L1MC4 LINE L1 -1255 6787 6506 1718 157 50 11 chr17 33489703 33489984 -51948496 + AluJo SINE Alu 1 292 -20 570 262 113 4 chr17 33491489 33491718 -51946762 + L1ME4a LINE L1 5690 5943 -178 299 224 51 31 chr17 33492134 33492232 -51946248 - Charlie8 DNA MER1_type -2185 232 133 2336 91 7 0 chr17 33492999 33493308 -51945172 - AluSp SINE Alu -2 311 1 2293 129 0 0 chr17 33493953 33494264 -51944216 + AluSx SINE Alu 1 311 -1 234 304 98 0 chr17 33494277 33494369 -51944111 - L1ME4a LINE L1 -543 5578 5478 405 0 0 0 chr17 33494670 33494715 -51943765 + (TG)n Simple_repeat Simple_repeat 2 46 0 319 157 0 0 chr17 33495365 33495416 -51943064 - MER66A LTR ERV1 -141 337 287 1990 138 3 16 chr17 33495512 33495816 -51942664 - AluJb SINE Alu -12 300 1 2434 82 13 0 chr17 33496379 33496685 -51941795 + AluSp SINE Alu 1 310 -3 2057 96 0 4 chr17 33496825 33497086 -51941394 + AluSx SINE Alu 1 260 -52 216 0 0 0 chr17 33497087 33497111 -51941369 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr17 33497375 33497396 -51941084 + AT_rich Low_complexity Low_complexity 1 21 0 1973 117 72 14 chr17 33498990 33499125 -51939355 + AluSx SINE Alu 1 127 -185 2485 77 0 0 chr17 33499125 33499423 -51939057 + AluSg SINE Alu 1 298 -12 1973 117 72 14 chr17 33499423 33499578 -51938902 + AluSx SINE Alu 127 308 -4 847 107 54 0 chr17 33500259 33500371 -51938109 - FLAM_C SINE Alu -25 118 1 678 197 0 0 chr17 33501191 33501313 -51937167 + FLAM_A SINE Alu 15 136 -6 1473 208 13 23 chr17 33501493 33501796 -51936684 - AluJo SINE Alu -12 300 1 1866 161 3 10 chr17 33501839 33502150 -51936330 - AluJb SINE Alu -3 309 1 326 303 13 40 chr17 33503131 33503283 -51935197 + MIR3 SINE MIR 47 194 -14 1989 123 127 51 chr17 33503696 33504110 -51934370 + MSTB1 LTR MaLR 1 429 -3 458 316 74 0 chr17 33504574 33504769 -51933711 - MIR SINE MIR -26 236 28 431 229 186 0 chr17 33505017 33505157 -51933323 - MIR SINE MIR -32 230 65 1442 218 31 3 chr17 33505393 33505682 -51932798 + AluJo SINE Alu 1 297 -15 2373 103 0 0 chr17 33505685 33505987 -51932493 + AluSx SINE Alu 2 303 -9 22 35 0 0 chr17 33506012 33506041 -51932439 + AT_rich Low_complexity Low_complexity 1 29 0 242 222 32 16 chr17 33507549 33507612 -51930868 - MIR SINE MIR -85 123 60 1426 122 109 0 chr17 33507636 33507857 -51930623 - AluSx SINE Alu -25 287 43 2321 99 7 0 chr17 33509232 33509525 -51928955 + AluSg SINE Alu 2 296 -14 1492 179 21 25 chr17 33509659 33509944 -51928536 - AluJb SINE Alu -28 284 1 1869 151 21 7 chr17 33510091 33510382 -51928098 - AluSx SINE Alu -17 295 1 2367 90 0 0 chr17 33510546 33510847 -51927633 - AluSx SINE Alu -11 301 1 1626 180 4 4 chr17 33511158 33511430 -51927050 - AluJb SINE Alu -19 293 22 2340 120 0 0 chr17 33511455 33511764 -51926716 - AluSc SINE Alu 0 309 1 2157 138 0 0 chr17 33511789 33512087 -51926393 - AluSx SINE Alu -14 298 1 1380 119 14 162 chr17 33512194 33512546 -51925934 - AluSp SINE Alu -13 300 1 443 273 96 38 chr17 33512623 33512832 -51925648 + MLT1J LTR MaLR 289 509 -2 219 266 33 14 chr17 33513303 33513407 -51925073 + MIR SINE MIR 46 151 -57 1682 71 0 0 chr17 33513409 33513619 -51924861 + L1PA8A LINE L1 5433 5642 -489 28 0 0 0 chr17 33564188 33564216 -51874264 + AT_rich Low_complexity Low_complexity 1 28 0 2360 100 0 3 chr17 33564216 33564527 -51873953 - AluSq SINE Alu -3 310 1 2021 137 0 16 chr17 33564762 33565076 -51873404 - AluSx SINE Alu -3 309 1 2282 108 0 0 chr17 33565268 33565564 -51872916 + AluSq SINE Alu 1 296 -17 291 167 0 21 chr17 33565668 33565716 -51872764 + MER4E LTR ERV1 648 694 -72 33 0 0 0 chr17 33565721 33565754 -51872726 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr17 33565863 33565884 -51872596 + AT_rich Low_complexity Low_complexity 1 21 0 1919 153 0 3 chr17 33570805 33571099 -51867381 + AluJb SINE Alu 3 295 -17 2293 88 17 3 chr17 33571544 33571839 -51866641 - AluSp SINE Alu -11 302 4 2264 109 0 22 chr17 33571839 33572159 -51866321 - AluSq SINE Alu 0 313 1 2354 87 0 3 chr17 33572932 33573231 -51865249 + AluSx SINE Alu 1 298 -14 1096 134 0 0 chr17 33575293 33575450 -51863030 - AluSc SINE Alu -23 286 130 2205 98 3 42 chr17 33575463 33575770 -51862710 - AluSp SINE Alu -18 295 1 2369 93 0 7 chr17 33576080 33576390 -51862090 + AluSq SINE Alu 1 308 -5 413 290 62 40 chr17 33577058 33577234 -51861246 - MIR SINE MIR -36 226 47 911 255 79 67 chr17 33579080 33579409 -51859071 + MER102b DNA MER1_type 1 333 -8 2208 124 3 0 chr17 33579761 33580067 -51858413 + AluSx SINE Alu 1 307 -5 1916 149 37 0 chr17 33581024 33581320 -51857160 + AluJb SINE Alu 1 307 -5 2183 90 4 4 chr17 33581801 33582116 -51856364 + AluSg SINE Alu 1 315 0 856 251 27 82 chr17 33582793 33583041 -51855439 + L2 LINE L2 2933 3153 -160 1793 164 0 7 chr17 33583041 33583349 -51855131 - AluJb SINE Alu 0 306 1 856 251 27 82 chr17 33583349 33583501 -51854979 + L2 LINE L2 3153 3312 -1 1122 219 62 0 chr17 33584163 33584405 -51854075 - MIR SINE MIR -2 260 4 942 134 0 7 chr17 33586169 33586311 -51852169 + AluJb SINE Alu 1 141 -171 2241 109 3 28 chr17 33586452 33586772 -51851708 + AluSx SINE Alu 1 312 0 2150 100 38 0 chr17 33586829 33587120 -51851360 + AluSp SINE Alu 12 313 0 22 70 0 0 chr17 33587122 33587165 -51851315 + AT_rich Low_complexity Low_complexity 1 43 0 2141 129 0 3 chr17 33587275 33587577 -51850903 - AluSx SINE Alu -11 301 1 2303 104 3 10 chr17 33587999 33588307 -51850173 - AluSx SINE Alu -6 306 1 341 298 69 38 chr17 33588434 33588565 -51849915 + L2 LINE L2 3138 3272 0 489 249 61 66 chr17 33588594 33588791 -51849689 + L1ME4a LINE L1 5619 5814 -307 241 234 58 71 chr17 33588835 33588897 -51849583 + L1ME4a LINE L1 5970 6031 -90 1886 151 0 10 chr17 33588897 33589201 -51849279 - AluJb SINE Alu -11 301 1 241 234 58 71 chr17 33589201 33589292 -51849188 + L1ME4a LINE L1 6031 6121 0 1477 184 59 0 chr17 33589455 33589726 -51848754 - AluJo SINE Alu -23 289 3 325 180 17 34 chr17 33590368 33590455 -51848025 - MIR SINE MIR -75 187 104 698 236 50 32 chr17 33591151 33591371 -51847109 - L1ME2 LINE L1 0 6164 5941 276 100 0 0 chr17 33592201 33592241 -51846239 + (CTA)n Simple_repeat Simple_repeat 2 41 0 575 166 50 83 chr17 33592317 33592498 -51845982 + MLT1D LTR MaLR 143 317 -188 212 318 175 24 chr17 33592512 33592638 -51845842 - MIR SINE MIR -111 151 7 1438 153 107 55 chr17 33592854 33593181 -51845299 + MER2 DNA MER2_type 1 344 0 2085 170 128 29 chr17 33593762 33594214 -51844266 + MLT1D LTR MaLR 1 497 -8 1357 218 63 33 chr17 33594291 33594548 -51843932 - MLT1I LTR MaLR 0 409 134 2033 110 0 20 chr17 33594548 33594710 -51843770 - AluSx SINE Alu -17 295 140 2296 77 0 0 chr17 33594710 33595007 -51843473 - AluSg SINE Alu -12 298 2 2033 110 0 20 chr17 33595007 33595145 -51843335 - AluSx SINE Alu -172 140 1 1357 218 63 33 chr17 33595145 33595282 -51843198 - MLT1I LTR MaLR -275 134 3 22 35 0 0 chr17 33595399 33595428 -51843052 + AT_rich Low_complexity Low_complexity 1 29 0 892 190 77 23 chr17 33597124 33597234 -51841246 - MER63 DNA MER1_type 0 1061 958 1818 157 7 13 chr17 33597234 33597539 -51840941 + AluJo SINE Alu 1 303 -9 892 190 77 23 chr17 33597539 33597649 -51840831 - MER63 DNA MER1_type -103 958 829 272 161 268 0 chr17 33597652 33597708 -51840772 + MER81 DNA DNA 2 72 -42 * 352 59 0 0 chr17 33597704 33597755 -51840725 - MER63 DNA MER1_type -416 645 595 2280 93 0 0 chr17 33597755 33598056 -51840424 + AluSg SINE Alu 1 301 -9 1110 139 0 0 chr17 33598059 33598231 -51840249 + AluJb SINE Alu 134 305 -7 1424 146 79 8 chr17 33598242 33598495 -51839985 + AluJo SINE Alu 1 271 -41 207 0 0 0 chr17 33598536 33598559 -51839921 + (TG)n Simple_repeat Simple_repeat 2 24 0 201 236 56 14 chr17 33598561 33598633 -51839847 + MIR SINE MIR 185 259 -3 226 347 193 30 chr17 33598656 33599279 -51839201 + L2 LINE L2 2254 2977 -337 2242 98 10 0 chr17 33599364 33599671 -51838809 + AluSx SINE Alu 1 310 -2 2129 92 20 0 chr17 33603463 33603756 -51834724 - AluSp SINE Alu -14 299 1 733 127 140 95 chr17 33603811 33604032 -51834448 + AluJb SINE Alu 70 300 -12 2345 61 0 3 chr17 33604934 33605230 -51833250 + AluSq SINE Alu 1 295 -18 225 0 0 0 chr17 33606202 33606227 -51832253 + (T)n Simple_repeat Simple_repeat 1 25 0 1543 132 21 121 chr17 33608774 33609114 -51829366 + AluJb SINE Alu 1 306 -6 2071 106 20 0 chr17 33609114 33609406 -51829074 + AluSx SINE Alu 1 298 -14 206 116 23 0 chr17 33609665 33609708 -51828772 + (TA)n Simple_repeat Simple_repeat 2 45 0 436 251 55 31 chr17 33610780 33610850 -51827630 - L1MA10 LINE L1 0 6334 6265 430 268 47 32 chr17 33610850 33611040 -51827440 - L1ME1 LINE L1 -61 6105 5913 380 235 11 38 chr17 33611044 33611073 -51827407 + L1MC4 LINE L1 6615 6643 -1399 1973 106 0 17 chr17 33611073 33611365 -51827115 + AluSx SINE Alu 1 287 -25 252 0 0 0 chr17 33611369 33611397 -51827083 + (CA)n Simple_repeat Simple_repeat 2 29 0 380 235 11 38 chr17 33611397 33611489 -51826991 + L1MC4 LINE L1 6646 6703 -1339 325 264 11 22 chr17 33611485 33611576 -51826904 + L1MC4 LINE L1 6614 6703 -1339 * 1186 213 84 0 chr17 33611597 33611884 -51826596 - L1ME1 LINE L1 -270 5896 5586 297 118 0 0 chr17 33611905 33611956 -51826524 + (TA)n Simple_repeat Simple_repeat 1 51 0 2027 117 0 0 chr17 33611956 33612239 -51826241 - AluSx SINE Alu -29 283 1 474 238 158 6 chr17 33612269 33612433 -51826047 - MER5A DNA MER1_type 0 189 1 306 232 27 71 chr17 33612512 33612624 -51825856 + LTR16A LTR ERVL 103 209 -241 1767 99 56 0 chr17 33612957 33613209 -51825271 + AluSx SINE Alu 6 271 -41 1929 127 0 7 chr17 33614426 33614710 -51823770 - AluSx SINE Alu -30 282 1 198 0 0 0 chr17 33615033 33615055 -51823425 + (A)n Simple_repeat Simple_repeat 1 22 0 617 202 0 0 chr17 33615310 33615414 -51823066 - AluJb SINE Alu -17 295 192 657 147 0 9 chr17 33615474 33615583 -51822897 + AluJb SINE Alu 26 133 -179 1427 140 0 0 chr17 33615584 33615806 -51822674 + AluSg/x SINE Alu 86 307 -5 1357 177 59 15 chr17 33615810 33616081 -51822399 + AluJb SINE Alu 1 283 -29 2211 97 0 10 chr17 33616482 33616782 -51821698 - AluSx SINE Alu -15 297 1 1562 243 32 80 chr17 33617178 33617245 -51821235 + MLT1G1 LTR MaLR 5 74 -521 1730 169 0 3 chr17 33617245 33617546 -51820934 - AluJb SINE Alu -10 302 3 1562 243 32 80 chr17 33617546 33617657 -51820823 + MLT1G1 LTR MaLR 74 189 -406 643 220 94 0 chr17 33617657 33617816 -51820664 + FAM SINE Alu 1 174 -1 1562 243 32 80 chr17 33617816 33618162 -51820318 + MLT1G1 LTR MaLR 189 505 -90 1486 197 3 10 chr17 33618207 33618501 -51819979 + AluJo SINE Alu 1 292 -20 2096 100 14 3 chr17 33618874 33619163 -51819317 + AluSq SINE Alu 1 292 -21 419 222 201 14 chr17 33619249 33619393 -51819087 + MER5A DNA MER1_type 13 183 -6 184 333 0 13 chr17 33619567 33619645 -51818835 - MIR SINE MIR -80 128 52 2171 80 3 3 chr17 33620861 33621173 -51817307 + AluSq SINE Alu 1 312 0 932 144 6 33 chr17 33621187 33621368 -51817112 + FRAM SINE Alu 1 176 0 945 113 75 24 chr17 33621379 33621683 -51816797 + THE1C LTR MaLR 1 375 0 492 255 21 35 chr17 33621739 33621880 -51816600 + MER5A DNA MER1_type 7 145 -44 2615 39 0 0 chr17 33622065 33622376 -51816104 + AluY SINE Alu 1 311 0 1774 133 28 14 chr17 33622631 33622917 -51815563 - AluJb SINE Alu -16 296 7 1572 162 68 0 chr17 33622933 33623211 -51815269 - AluJb SINE Alu -15 297 1 1913 129 28 0 chr17 33623250 33623537 -51814943 + AluSx SINE Alu 1 295 -17 1994 118 0 58 chr17 33623746 33623924 -51814556 - AluSx SINE Alu -1 311 159 1985 123 3 0 chr17 33623924 33624217 -51814263 - AluSg SINE Alu -16 294 1 1994 118 0 58 chr17 33624217 33624367 -51814113 - AluSx SINE Alu -153 159 2 2383 81 0 0 chr17 33624733 33625042 -51813438 + AluSc SINE Alu 1 309 0 219 36 0 0 chr17 33625203 33625231 -51813249 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 203 255 0 0 chr17 33626049 33626096 -51812384 + CT-rich Low_complexity Low_complexity 1 47 0 634 200 16 0 chr17 33626192 33626317 -51812163 + FLAM_A SINE Alu 11 137 -5 2472 57 0 0 chr17 33626398 33626696 -51811784 + AluY SINE Alu 1 298 -13 342 181 37 0 chr17 33627242 33627321 -51811159 + L1ME3A LINE L1 5532 5615 -555 442 248 135 0 chr17 33627326 33627428 -51811052 + L1ME3A LINE L1 5705 5832 -338 971 87 0 36 chr17 33627428 33627566 -51810914 + FLAM_C SINE Alu 1 133 0 442 248 135 0 chr17 33627566 33627604 -51810876 + L1ME3A LINE L1 5832 5864 -306 309 109 0 0 chr17 33627652 33627698 -51810782 + (CA)n Simple_repeat Simple_repeat 2 47 0 221 314 85 51 chr17 33628068 33628186 -51810294 + L2 LINE L2 3147 3268 -4 247 282 54 49 chr17 33629528 33629691 -51808789 - MIR SINE MIR -60 148 18 188 298 10 87 chr17 33629833 33629937 -51808543 + MIR SINE MIR 111 206 -56 28 48 0 0 chr17 33630448 33630490 -51807990 + GC_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr17 33630732 33630755 -51807725 + (CGCGG)n Simple_repeat Simple_repeat 1 23 0 32 111 0 0 chr17 33630805 33630949 -51807531 + GC_rich Low_complexity Low_complexity 1 144 0 1176 138 67 0 chr17 33632668 33632863 -51805617 + MER3 DNA MER1_type 1 208 -1 1429 167 51 31 chr17 33632904 33633061 -51805419 - AluJb SINE Alu -11 301 134 1853 86 75 14 chr17 33633061 33633340 -51805140 - AluSp SINE Alu -17 296 1 1429 167 51 31 chr17 33633340 33633476 -51805004 - AluJb SINE Alu -178 134 2 372 145 0 0 chr17 33634865 33634927 -51803553 - AluSx SINE Alu -2 300 239 1084 101 5 74 chr17 33634927 33635038 -51803442 - AluSx SINE Alu -136 176 82 2294 54 9 31 chr17 33635038 33635355 -51803125 + AluY SINE Alu 1 310 -1 1084 101 5 74 chr17 33635355 33635432 -51803048 - AluSx SINE Alu -230 82 1 313 266 191 0 chr17 33635432 33635558 -51802922 - MIR SINE MIR -72 190 42 1220 94 0 6 chr17 33635652 33635822 -51802658 - AluSp SINE Alu -8 305 137 1833 136 0 10 chr17 33635862 33636157 -51802323 + AluSx SINE Alu 5 296 -16 2233 93 0 3 chr17 33636158 33636460 -51802020 + AluSx SINE Alu 1 301 -11 191 254 0 36 chr17 33636999 33637054 -51801426 + L2 LINE L2 3239 3291 -22 2139 100 0 29 chr17 33638028 33638337 -51800143 - AluSx SINE Alu -12 300 1 1882 131 21 3 chr17 33639426 33639708 -51798772 - AluSx SINE Alu -16 296 10 1554 201 7 13 chr17 33639844 33640147 -51798333 - AluJb SINE Alu -11 301 1 2283 97 13 0 chr17 33642551 33642850 -51795630 - AluSg SINE Alu -7 303 1 2263 107 7 0 chr17 33642928 33643226 -51795254 + AluSq SINE Alu 1 300 -13 360 296 92 83 chr17 33644774 33644928 -51793552 - MARNA DNA Mariner -173 413 262 2044 105 45 0 chr17 33644928 33645214 -51793266 + AluSx SINE Alu 1 299 -13 2230 111 0 19 chr17 33645216 33645532 -51792948 + AluSg SINE Alu 1 310 0 360 296 92 83 chr17 33645532 33645722 -51792758 - MARNA DNA Mariner -324 262 63 300 333 102 0 chr17 33645605 33645752 -51792728 + MARNA DNA Mariner 394 555 -31 * 255 200 100 0 chr17 33645752 33645812 -51792668 + MIR SINE MIR 197 262 0 1036 157 0 0 chr17 33646448 33646601 -51791879 - AluJb SINE Alu -25 287 135 1621 185 6 45 chr17 33647419 33647733 -51790747 + AluJo SINE Alu 1 302 -10 2035 130 7 20 chr17 33647818 33648118 -51790362 - AluSx SINE Alu -16 296 1 2336 92 0 0 chr17 33648327 33648621 -51789859 + AluSx SINE Alu 1 294 -18 2267 105 7 0 chr17 33648887 33649192 -51789288 + AluSx SINE Alu 1 307 -5 228 263 50 20 chr17 33650548 33650647 -51787833 - L1ME4a LINE L1 -65 6056 5955 2420 68 3 0 chr17 33651045 33651341 -51787139 - AluSp SINE Alu -16 297 1 2143 118 0 20 chr17 33651487 33651793 -51786687 + AluSx SINE Alu 2 301 -11 384 328 113 38 chr17 33651907 33652026 -51786454 - MIR SINE MIR -6 256 147 924 143 0 0 chr17 33652026 33652159 -51786321 + FLAM_C SINE Alu 1 133 0 384 328 113 38 chr17 33652159 33652277 -51786203 - MIR SINE MIR -115 147 1 451 304 175 0 chr17 33652286 33652457 -51786023 + MIR SINE MIR 60 260 -2 2017 152 0 0 chr17 33652597 33652893 -51785587 - AluSx SINE Alu -16 296 1 2110 112 17 7 chr17 33653522 33653818 -51784662 - AluSx SINE Alu -12 300 2 2032 145 3 0 chr17 33654264 33654554 -51783926 - AluJb SINE Alu -21 291 1 978 154 18 72 chr17 33654677 33654898 -51783582 + L1MC5 LINE L1 7702 7910 -51 2250 102 0 3 chr17 33655533 33655828 -51782652 - AluSx SINE Alu -18 294 1 2207 98 10 7 chr17 33655839 33656135 -51782345 - AluSx SINE Alu -15 297 1 1422 94 0 33 chr17 33656704 33656917 -51781563 - AluY SINE Alu 0 311 106 768 171 47 0 chr17 33656917 33657046 -51781434 + AluSp/q SINE Alu 170 304 -9 975 121 8 0 chr17 33657103 33657235 -51781245 - FRAM SINE Alu -45 131 1 776 196 63 13 chr17 33657566 33657724 -51780756 + FRAM SINE Alu 1 166 0 2138 101 0 17 chr17 33658027 33658346 -51780134 - AluSg SINE Alu 0 314 1 342 244 17 50 chr17 33658359 33658478 -51780002 - MER5A DNA MER1_type -9 180 66 224 175 0 0 chr17 33658825 33658865 -51779615 + L2 LINE L2 3274 3313 0 1942 135 103 19 chr17 33659347 33659658 -51778822 + MER1B DNA MER1_type 1 337 0 783 218 0 0 chr17 33659711 33659844 -51778636 - FLAM_A SINE Alu 0 133 1 2051 132 10 6 chr17 33660148 33660459 -51778021 + AluSx SINE Alu 1 312 0 1670 135 0 111 chr17 33660481 33660612 -51777868 + AluJo SINE Alu 3 147 -165 2444 81 0 0 chr17 33660612 33660909 -51777571 - AluSx SINE Alu -15 297 1 1670 135 0 111 chr17 33660909 33661110 -51777370 + AluJo SINE Alu 147 298 -14 2056 153 0 0 chr17 33661110 33661418 -51777062 + AluSx SINE Alu 1 308 -4 235 323 0 0 chr17 33661585 33661675 -51776805 - MIR SINE MIR -62 146 65 1781 163 3 3 chr17 33661716 33661998 -51776482 + AluJb SINE Alu 1 282 -30 405 54 0 0 chr17 33662001 33662057 -51776423 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 83 21 42 chr17 33662185 33662233 -51776247 + (TA)n Simple_repeat Simple_repeat 2 48 0 2871 76 3 0 chr17 33662417 33662772 -51775708 + L1PA13 LINE L1 5805 6160 -3 2200 114 10 3 chr17 33662899 33663206 -51775274 + AluSx SINE Alu 1 309 -3 2090 153 0 0 chr17 33663214 33663521 -51774959 + AluSx SINE Alu 1 307 -5 263 314 67 62 chr17 33664299 33664484 -51773996 + L2 LINE L2 2646 2834 -480 2208 111 14 0 chr17 33664484 33664773 -51773707 - AluSx SINE Alu -19 293 1 263 314 67 62 chr17 33664773 33664797 -51773683 + L2 LINE L2 2834 2856 -458 344 227 13 0 chr17 33664824 33664899 -51773581 - MIR SINE MIR -157 105 30 2262 88 0 10 chr17 33665014 33665354 -51773126 + AluY SINE Alu 1 311 0 21 0 0 0 chr17 33665364 33665385 -51773095 + AT_rich Low_complexity Low_complexity 1 21 0 2302 89 20 0 chr17 33666102 33666406 -51772074 + AluSg SINE Alu 1 310 0 2494 73 0 10 chr17 33666621 33666935 -51771545 + AluSq SINE Alu 1 311 -2 183 325 0 25 chr17 33668239 33668283 -51770197 - MIR SINE MIR 0 262 219 2225 103 3 0 chr17 33668283 33668573 -51769907 - AluSx SINE Alu -21 291 1 183 325 0 25 chr17 33668573 33668608 -51769872 - MIR SINE MIR -43 219 185 2259 104 7 0 chr17 33668696 33668993 -51769487 - AluSq SINE Alu -14 299 1 1834 151 19 19 chr17 33669073 33669384 -51769096 + AluJb SINE Alu 1 311 -1 1629 154 4 36 chr17 33669384 33669664 -51768816 + AluJo SINE Alu 22 292 -20 1454 113 80 0 chr17 33670501 33670714 -51767766 - MER30 DNA MER1_type 0 230 1 242 322 110 0 chr17 33670716 33670834 -51767646 + MIR SINE MIR 91 221 -41 1503 125 0 9 chr17 33670859 33671075 -51767405 + AluJo SINE Alu 87 300 -12 862 228 145 4 chr17 33671096 33671324 -51767156 + MIR SINE MIR 3 262 0 2583 53 0 3 chr17 33671374 33671677 -51766803 + AluY SINE Alu 1 302 -9 802 171 0 23 chr17 33673070 33673199 -51765281 - FLAM_C SINE Alu -3 130 5 1857 153 24 0 chr17 33673240 33673535 -51764945 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr17 33674053 33674083 -51764397 + AT_rich Low_complexity Low_complexity 1 30 0 923 141 0 0 chr17 33674085 33674213 -51764267 - FLAM_C SINE Alu -5 128 1 2234 116 0 0 chr17 33675129 33675432 -51763048 + AluSx SINE Alu 1 303 -9 365 269 56 19 chr17 33675801 33675909 -51762571 + L2 LINE L2 3188 3299 -14 716 229 8 0 chr17 33676276 33676407 -51762073 + FLAM_A SINE Alu 1 132 -1 1815 148 0 68 chr17 33676416 33676741 -51761739 - AluJo SINE Alu -9 303 1 865 255 82 5 chr17 33676883 33677091 -51761389 + MER58A DNA MER1_type 1 224 0 2306 109 0 3 chr17 33677142 33677444 -51761036 + AluSq SINE Alu 1 301 -12 1826 173 7 0 chr17 33677519 33677814 -51760666 - AluJb SINE Alu -15 297 1 198 0 0 0 chr17 33678475 33678497 -51759983 + (A)n Simple_repeat Simple_repeat 1 22 0 311 377 34 17 chr17 33678503 33678678 -51759802 + MIR SINE MIR 20 197 -65 2125 122 0 3 chr17 33678732 33679027 -51759453 + AluSg SINE Alu 3 296 -14 2040 146 0 7 chr17 33679582 33679883 -51758597 - AluSx SINE Alu -13 299 1 2139 79 25 14 chr17 33680455 33680789 -51757691 + AluSp SINE Alu 1 337 0 302 305 30 54 chr17 33680941 33681108 -51757372 - MIR SINE MIR -10 252 90 1707 184 0 0 chr17 33681113 33681417 -51757063 + AluJb SINE Alu 1 304 0 980 178 18 0 chr17 33681422 33681585 -51756895 + FRAM SINE Alu 1 158 -18 180 398 11 11 chr17 33682141 33682234 -51756246 + MIR SINE MIR 32 124 -84 2137 122 0 0 chr17 33683009 33683303 -51755177 + AluSx SINE Alu 1 294 -18 2505 57 0 25 chr17 33683305 33683619 -51754861 + AluY SINE Alu 1 306 -5 2130 119 7 0 chr17 33684037 33684339 -51754141 + AluSx SINE Alu 1 304 -8 869 154 0 7 chr17 33684680 33684816 -51753664 + AluJb SINE Alu 1 135 -177 1794 159 21 0 chr17 33684816 33685106 -51753374 + AluJb SINE Alu 1 296 -16 2361 64 0 0 chr17 33685108 33685429 -51753051 + AluY SINE Alu 1 321 0 343 288 32 8 chr17 33685432 33685557 -51752923 + L1MC4a LINE L1 6545 6672 -1136 1447 69 6 0 chr17 33685557 33685730 -51752750 - AluSp SINE Alu -138 175 2 826 207 178 55 chr17 33685730 33686182 -51752298 + L1MC5 LINE L1 6820 7423 -538 525 255 82 48 chr17 33686196 33686372 -51752108 + MER21B LTR ERV1 313 531 -400 1998 162 87 58 chr17 33686373 33686730 -51751750 + L1MD3 LINE L1 7471 7816 -179 2088 135 0 3 chr17 33686730 33687026 -51751454 - AluSx SINE Alu -17 295 1 1592 208 3 3 chr17 33687027 33687321 -51751159 - AluJo SINE Alu -18 294 1 1998 162 87 58 chr17 33687321 33687442 -51751038 + L1MD3 LINE L1 7815 7965 -30 816 171 0 0 chr17 33687445 33687562 -51750918 + AluJb SINE Alu 2 118 -194 24 67 0 0 chr17 33687568 33687613 -51750867 + AT_rich Low_complexity Low_complexity 1 45 0 326 223 58 58 chr17 33687628 33687749 -51750731 + L1MC5 LINE L1 7471 7591 -370 180 0 0 0 chr17 33687749 33687769 -51750711 + (A)n Simple_repeat Simple_repeat 1 20 0 2456 193 20 64 chr17 33687769 33688233 -51750247 + L1ME2 LINE L1 5423 5857 -307 2217 100 10 10 chr17 33688233 33688542 -51749938 + AluSx SINE Alu 3 311 -1 2456 193 20 64 chr17 33688542 33688672 -51749808 + L1ME2 LINE L1 5857 5991 -173 534 249 6 36 chr17 33688748 33688832 -51749648 + L1MC5 LINE L1 7717 7795 -166 2129 119 30 0 chr17 33688832 33689135 -51749345 + AluSx SINE Alu 1 312 0 534 249 6 36 chr17 33689135 33689215 -51749265 + L1MC5 LINE L1 7795 7876 -85 580 207 44 7 chr17 33689377 33689512 -51748968 + MLT1H1 LTR MaLR 416 555 0 236 325 44 26 chr17 33689999 33690113 -51748367 + MER5B DNA MER1_type 63 178 0 819 144 0 0 chr17 33691116 33691234 -51747246 + AluJb SINE Alu 1 118 -194 29 28 0 0 chr17 33691234 33691270 -51747210 + AT_rich Low_complexity Low_complexity 1 36 0 571 216 7 68 chr17 33691297 33691445 -51747035 + MLT1E2 LTR MaLR 62 200 -424 681 145 0 60 chr17 33691459 33691576 -51746904 + FLAM_C SINE Alu 2 111 -32 2549 84 0 0 chr17 33691624 33691933 -51746547 - AluY SINE Alu -2 309 1 981 164 20 0 chr17 33691949 33692101 -51746379 + AluJb SINE Alu 131 285 -27 1465 212 62 44 chr17 33692146 33692551 -51745929 + MLT1E2 LTR MaLR 207 618 -8 2148 132 0 7 chr17 33692705 33693000 -51745480 - AluSx SINE Alu -19 293 1 984 170 0 0 chr17 33693842 33693995 -51744485 - FRAM SINE Alu -19 157 5 2122 117 17 3 chr17 33694008 33694308 -51744172 - AluSg SINE Alu -4 306 3 238 159 0 0 chr17 33694507 33694551 -51743929 + HsTC2 DNA Tc2 1 44 -1854 883 179 6 13 chr17 33694558 33694714 -51743766 + FRAM SINE Alu 1 155 -21 21 36 0 0 chr17 33694717 33694745 -51743735 + AT_rich Low_complexity Low_complexity 1 28 0 1540 181 0 29 chr17 33694765 33695046 -51743434 + AluJo SINE Alu 25 297 -15 425 259 30 8 chr17 33695047 33695178 -51743302 + MER104 DNA Tc2 47 180 0 781 227 16 0 chr17 33695178 33695363 -51743117 + MIR SINE MIR 75 262 0 1942 127 3 59 chr17 33695518 33695840 -51742640 + AluSx SINE Alu 1 304 -8 2341 84 3 7 chr17 33695841 33696150 -51742330 + AluSp SINE Alu 1 308 -5 373 109 0 0 chr17 33696168 33696223 -51742257 - Alu SINE Alu -5 297 243 866 98 0 0 chr17 33696227 33696339 -51742141 + AluSc SINE Alu 182 293 -16 1342 111 5 58 chr17 33696339 33696547 -51741933 - AluSq SINE Alu -116 197 1 2280 129 0 0 chr17 33696650 33696960 -51741520 + AluSg SINE Alu 1 310 0 1778 179 29 0 chr17 33697461 33697741 -51740739 - AluJo SINE Alu -24 288 1 1750 152 22 0 chr17 33697897 33698216 -51740264 + AluSx SINE Alu 1 325 0 2125 131 0 16 chr17 33698217 33698354 -51740126 + AluSx SINE Alu 1 139 -173 2302 104 0 0 chr17 33698354 33698652 -51739828 + AluSg SINE Alu 1 298 -12 2125 131 0 16 chr17 33698652 33698827 -51739653 + AluSx SINE Alu 139 308 -4 1637 175 0 55 chr17 33698896 33699205 -51739275 - AluJb SINE Alu -20 292 1 1363 193 71 4 chr17 33699316 33699585 -51738895 - AluJb SINE Alu -25 287 1 499 66 0 0 chr17 33799842 33799903 -51638577 - Alu SINE Alu -248 62 2 427 231 60 8 chr17 33799916 33800033 -51638447 + MIR SINE MIR 124 246 -16 201 294 0 0 chr17 33800035 33800127 -51638353 + (TAG)n Simple_repeat Simple_repeat 2 93 0 1548 168 88 15 chr17 33800173 33800447 -51638033 + AluJo SINE Alu 1 294 -18 485 251 6 0 chr17 33800447 33800614 -51637866 + (TAG)n Simple_repeat Simple_repeat 1 168 0 239 258 12 18 chr17 33800636 33800799 -51637681 + (TAG)n Simple_repeat Simple_repeat 3 164 0 360 300 38 35 chr17 33801585 33801762 -51636718 + MIR SINE MIR 42 262 0 258 238 14 86 chr17 33802620 33802764 -51635716 + MIR3 SINE MIR 56 189 -19 1233 246 113 54 chr17 33803725 33803755 -51634725 - L2 LINE L2 0 3313 3286 2103 106 31 7 chr17 33803755 33804048 -51634432 + AluSx SINE Alu 3 302 -10 1233 246 113 54 chr17 33804048 33804897 -51633583 - L2 LINE L2 -27 3286 2359 340 339 0 31 chr17 33805013 33805143 -51633337 + MIR SINE MIR 16 141 -121 387 0 0 0 chr17 33805149 33805192 -51633288 + (TG)n Simple_repeat Simple_repeat 1 43 0 2389 95 0 0 chr17 33805245 33805550 -51632930 + AluY SINE Alu 1 305 -6 2100 117 0 45 chr17 33805651 33805960 -51632520 - AluSx SINE Alu -17 295 1 532 284 49 0 chr17 33805964 33806126 -51632354 + MIR SINE MIR 91 260 -2 413 333 44 11 chr17 33806450 33806633 -51631847 - MIR3 SINE MIR -13 195 7 414 0 0 0 chr17 33807113 33807159 -51631321 + (TG)n Simple_repeat Simple_repeat 2 47 0 1651 54 0 5 chr17 33808340 33808543 -51629937 + L1PA8 LINE L1 5956 6157 -15 216 296 157 31 chr17 33808595 33808675 -51629805 - MIR SINE MIR -50 212 143 2028 165 3 0 chr17 33808675 33808984 -51629496 + AluJb SINE Alu 1 310 -2 216 296 157 31 chr17 33808984 33809062 -51629418 - MIR SINE MIR -119 143 34 312 102 0 0 chr17 33809264 33809313 -51629167 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1941 112 4 18 chr17 33809320 33809598 -51628882 - AluJb SINE Alu -38 274 1 338 349 38 0 chr17 33809842 33809974 -51628506 - MIR SINE MIR -108 154 18 2283 81 0 11 chr17 33810047 33810361 -51628119 - AluY SINE Alu 0 311 1 307 276 92 51 chr17 33810397 33810593 -51627887 + L1MC4a LINE L1 5948 6151 -1657 2026 154 19 6 chr17 33810601 33810965 -51627515 - L1MB3 LINE L1 -1 6182 5814 324 98 0 0 chr17 33811008 33811059 -51627421 - L1MB3 LINE L1 -349 5834 5784 311 264 58 11 chr17 33811059 33811146 -51627334 - L1MC4 LINE L1 -1348 6694 6604 2397 93 3 0 chr17 33811216 33811517 -51626963 + AluSq SINE Alu 1 302 -11 931 131 20 7 chr17 33811517 33811670 -51626810 - L1M3 LINE L1 -422 5749 5595 213 257 99 99 chr17 33811988 33812140 -51626340 + MIR SINE MIR 34 185 -77 573 253 0 0 chr17 33812849 33813011 -51625469 + CT-rich Low_complexity Low_complexity 2 163 0 241 261 0 15 chr17 33813044 33813109 -51625371 + CT-rich Low_complexity Low_complexity 4 67 0 2182 99 3 38 chr17 33813309 33813622 -51624858 - AluSq SINE Alu -11 302 1 496 307 93 19 chr17 33814030 33814245 -51624235 + L2 LINE L2 3082 3312 -1 2380 105 0 0 chr17 33814432 33814738 -51623742 + AluSg SINE Alu 1 306 -4 2270 92 3 0 chr17 33814792 33815097 -51623383 + AluSp SINE Alu 1 306 0 203 299 92 46 chr17 33815204 33815291 -51623189 - L2 LINE L2 -21 3251 3161 2247 115 0 0 chr17 33815293 33815581 -51622899 + AluSq SINE Alu 12 299 -14 1024 92 0 35 chr17 33815975 33816117 -51622363 - FLAM_C SINE Alu -6 137 1 956 137 27 0 chr17 33816117 33816263 -51622217 - MER20 DNA MER1_type -21 198 49 2364 261 34 9 chr17 33816263 33817067 -51621413 - MER45C DNA AcHobo -1 952 66 231 250 18 0 chr17 33817086 33817142 -51621338 - MER20 DNA MER1_type -162 57 1 202 340 47 19 chr17 33817147 33817253 -51621227 - L2 LINE L2 -202 3070 2962 680 289 53 13 chr17 33817808 33818033 -51620447 - MIR SINE MIR -16 246 13 270 188 60 128 chr17 33818031 33818074 -51620406 + MIR SINE MIR 124 168 -94 * 2021 138 3 0 chr17 33818074 33818384 -51620096 + AluSx SINE Alu 1 311 0 270 188 60 128 chr17 33818384 33818488 -51619992 + MIR SINE MIR 168 262 0 428 251 74 12 chr17 33818919 33819056 -51619424 - MIR SINE MIR -59 149 3 285 247 62 0 chr17 33819166 33819247 -51619233 + MIR SINE MIR 137 222 -40 389 319 37 37 chr17 33819257 33819420 -51619060 + L2 LINE L2 3102 3264 -8 300 254 29 60 chr17 33819882 33820037 -51618443 + MIR SINE MIR 42 191 -61 236 157 39 0 chr17 33820126 33820177 -51618303 + CT-rich Low_complexity Low_complexity 2 54 0 392 283 48 24 chr17 33820288 33820454 -51618026 + MIR SINE MIR 23 192 -70 277 217 0 0 chr17 33820575 33820621 -51617859 - L2 LINE L2 -2 3270 3225 191 311 0 0 chr17 33820625 33820670 -51617810 - L2 LINE L2 -3 3269 3225 342 258 51 84 chr17 33821242 33821420 -51617060 - MIR SINE MIR -71 191 20 303 333 30 0 chr17 33821411 33821510 -51616970 + MIR3 SINE MIR 85 186 -22 * 1189 157 98 0 chr17 33821539 33821743 -51616737 + MER58A DNA MER1_type 1 224 0 2396 82 7 0 chr17 33821867 33822170 -51616310 - AluY SINE Alu -6 305 1 445 184 124 5 chr17 33822227 33822410 -51616070 - L1ME2 LINE L1 -16 6148 5886 1689 159 48 24 chr17 33822419 33822708 -51615772 - AluJo SINE Alu -15 297 2 331 261 113 26 chr17 33822750 33822865 -51615615 - L2 LINE L2 -1 3312 3188 219 274 84 11 chr17 33822987 33823082 -51615398 - MIR3 SINE MIR 0 208 107 498 256 117 22 chr17 33823799 33823979 -51614501 - MIR SINE MIR -64 198 2 182 353 39 20 chr17 33824087 33824189 -51614291 + MIR SINE MIR 48 151 -111 275 263 10 0 chr17 33825602 33825700 -51612780 - MIR SINE MIR -62 146 94 22 0 0 0 chr17 33830672 33830694 -51607786 + AT_rich Low_complexity Low_complexity 1 22 0 2135 112 10 14 chr17 33831792 33832087 -51606393 + AluSq SINE Alu 1 294 -19 180 97 0 0 chr17 33832087 33832118 -51606362 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 187 260 58 106 chr17 33833041 33833145 -51605335 + L3b LINE CR1 1435 1533 -50 2274 82 3 38 chr17 33834173 33834513 -51603967 - AluY SINE Alu 0 311 3 425 323 82 76 chr17 33834561 33834864 -51603616 - L2 LINE L2 0 3272 2968 727 294 63 8 chr17 33835498 33835736 -51602744 + MIR SINE MIR 12 262 0 1859 140 10 40 chr17 33835997 33836297 -51602183 + AluJo SINE Alu 5 295 -17 327 280 98 15 chr17 33836698 33836830 -51601650 + L3 LINE CR1 1403 1545 -32 2352 100 0 3 chr17 33836971 33837271 -51601209 + AluSq SINE Alu 1 299 -14 234 0 0 0 chr17 33838164 33838190 -51600290 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 417 187 112 9 chr17 33838667 33838774 -51599706 - MER103 DNA DNA -13 153 36 1081 96 0 20 chr17 33839080 33839226 -51599254 + FLAM_C SINE Alu 1 143 0 653 167 42 0 chr17 33839249 33839369 -51599111 - FLAM_C SINE Alu -7 126 2 485 280 25 0 chr17 33842227 33842345 -51596135 - MIR SINE MIR -68 140 20 203 330 50 30 chr17 33842351 33842451 -51596029 - L2 LINE L2 -32 3240 3139 956 161 0 0 chr17 33842604 33842753 -51595727 - FRAM SINE Alu -6 170 22 406 265 60 0 chr17 33842886 33843003 -51595477 + MIR SINE MIR 84 207 -55 2600 44 0 0 chr17 33843455 33843750 -51594730 + AluY SINE Alu 1 295 -16 2185 108 0 35 chr17 33843759 33844074 -51594406 + AluSx SINE Alu 1 304 -8 495 346 14 37 chr17 33845599 33845813 -51592667 - MIR SINE MIR -2 260 52 225 0 0 0 chr17 33845903 33845928 -51592552 + (CA)n Simple_repeat Simple_repeat 2 26 0 203 88 29 0 chr17 33847094 33847128 -51591352 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 273 57 0 0 chr17 33847127 33847162 -51591318 + (CA)n Simple_repeat Simple_repeat 2 36 0 1441 165 81 28 chr17 33847262 33847584 -51590896 - MER58B DNA MER1_type 0 341 3 588 252 90 13 chr17 33847593 33847748 -51590732 + MER5B DNA MER1_type 1 167 -11 523 217 159 25 chr17 33847760 33847917 -51590563 - MER5A DNA MER1_type -6 183 6 505 280 122 11 chr17 33848027 33848216 -51590264 + MIR SINE MIR 9 218 -44 201 218 0 36 chr17 33848269 33848324 -51590156 + CT-rich Low_complexity Low_complexity 3 55 0 2550 44 6 25 chr17 33848660 33848977 -51589503 - AluY SINE Alu 0 311 1 304 253 300 20 chr17 33849570 33849720 -51588760 + MIR SINE MIR 37 228 -34 238 253 38 108 chr17 33849921 33850079 -51588401 + MER5A DNA MER1_type 3 149 -29 510 137 0 0 chr17 33850085 33850158 -51588322 + FRAM SINE Alu 26 98 -78 420 151 0 0 chr17 33850253 33850326 -51588154 + Alu SINE Alu 238 310 -2 298 270 264 6 chr17 33850432 33850591 -51587889 + MIR3 SINE MIR 8 207 -1 189 175 0 0 chr17 33850686 33850726 -51587754 + CT-rich Low_complexity Low_complexity 1 40 0 367 330 17 9 chr17 33851267 33851382 -51587098 + L2 LINE L2 3152 3267 -5 212 130 0 43 chr17 33851490 33851536 -51586944 + (TA)n Simple_repeat Simple_repeat 1 44 0 234 156 0 0 chr17 33852031 33852076 -51586404 + (ATGGTG)n Simple_repeat Simple_repeat 4 48 0 1395 169 56 16 chr17 33852811 33852891 -51585589 + AluJo SINE Alu 41 116 -196 261 57 0 0 chr17 33852891 33852926 -51585554 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1395 169 56 16 chr17 33852926 33853094 -51585386 + AluJo SINE Alu 116 299 -13 438 243 140 29 chr17 33853218 33853354 -51585126 - L2 LINE L2 0 3313 3163 372 22 0 0 chr17 33855145 33855190 -51583290 + (GA)n Simple_repeat Simple_repeat 2 46 0 2184 116 0 3 chr17 33855534 33855826 -51582654 + AluSx SINE Alu 1 291 -21 2166 102 0 58 chr17 33855870 33856183 -51582297 - AluSx SINE Alu -17 295 1 202 221 191 15 chr17 33856711 33856779 -51581701 - L2 LINE L2 0 3313 3234 344 305 190 14 chr17 33856957 33857252 -51581228 - L2 LINE L2 -346 2968 2622 301 103 0 0 chr17 33857701 33857740 -51580740 + L2 LINE L2 3255 3293 -20 710 283 81 18 chr17 33857802 33858025 -51580455 - MIR SINE MIR -6 256 20 234 367 13 0 chr17 33858360 33858439 -51580041 - MIR3 SINE MIR -119 89 10 24 0 0 0 chr17 33858663 33858687 -51579793 + AT_rich Low_complexity Low_complexity 1 24 0 545 278 76 10 chr17 33859205 33859403 -51579077 - MIR SINE MIR -39 223 13 448 244 59 22 chr17 33859411 33859546 -51578934 - L3 LINE CR1 -188 1389 1250 546 160 92 59 chr17 33861064 33861183 -51577297 - L2 LINE L2 0 3313 3191 574 308 99 9 chr17 33862106 33862317 -51576163 + MIR SINE MIR 20 249 -13 1838 158 16 29 chr17 33862477 33862793 -51575687 + AluSx SINE Alu 1 312 0 555 207 171 8 chr17 33863853 33864011 -51574469 + MIR SINE MIR 6 185 -61 499 293 144 6 chr17 33864310 33864491 -51573989 + MIR SINE MIR 2 207 -55 1977 172 3 0 chr17 33864617 33864925 -51573555 + AluJo SINE Alu 1 309 -3 326 331 16 33 chr17 33865006 33865127 -51573353 + MIR SINE MIR 48 166 -96 189 0 0 0 chr17 33865337 33865358 -51573122 + (T)n Simple_repeat Simple_repeat 1 21 0 2213 125 0 0 chr17 33865776 33866073 -51572407 + AluSx SINE Alu 1 297 -15 426 349 125 20 chr17 33866146 33866441 -51572039 + L1 LINE L1 4018 4343 -1803 542 202 0 10 chr17 33866611 33866710 -51571770 + L2 LINE L2 3195 3292 -21 850 167 15 0 chr17 33866715 33866847 -51571633 - FLAM_C SINE Alu -9 134 1 315 302 130 9 chr17 33867319 33867427 -51571053 + MIR SINE MIR 46 164 -44 565 232 32 74 chr17 33869162 33869352 -51569128 - MER5A DNA MER1_type 0 189 8 229 267 58 35 chr17 33870632 33870718 -51567762 + MIR SINE MIR 45 132 -76 554 299 71 16 chr17 33871866 33872050 -51566430 + MIR SINE MIR 21 214 -48 21 36 0 0 chr17 33872055 33872083 -51566397 + AT_rich Low_complexity Low_complexity 1 28 0 307 224 222 0 chr17 33874029 33874146 -51564334 + MIR SINE MIR 49 147 -61 372 316 29 15 chr17 33874842 33874978 -51563502 - MIR3 SINE MIR -49 159 22 1642 143 159 50 chr17 33875351 33875569 -51562911 - MSTB LTR MaLR -7 419 226 1954 145 30 3 chr17 33875569 33875872 -51562608 - AluJb SINE Alu -1 311 1 1642 143 159 50 chr17 33875872 33876031 -51562449 - MSTB LTR MaLR -200 226 1 8330 157 65 16 chr17 33876031 33877572 -51560908 - MSTB-int LTR MaLR 0 1651 34 2142 100 11 4 chr17 33877606 33877885 -51560595 - AluSq SINE Alu -32 281 1 269 149 21 0 chr17 33877885 33877932 -51560548 - MSTB-int LTR MaLR -1602 49 2 2599 143 52 5 chr17 33877933 33878340 -51560140 - MSTB LTR MaLR 0 426 1 367 172 75 32 chr17 33878378 33878471 -51560009 + MER103 DNA DNA 3 99 -67 367 265 139 8 chr17 33878545 33878742 -51559738 + MIR SINE MIR 4 244 -18 2317 115 0 3 chr17 33878817 33879122 -51559358 - AluSg SINE Alu -6 304 1 190 352 0 0 chr17 33879341 33879395 -51559085 + L2 LINE L2 3200 3253 -19 198 103 0 0 chr17 33879401 33879430 -51559050 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 354 338 49 36 chr17 33879433 33879658 -51558822 - MIR SINE MIR -6 256 29 193 320 26 26 chr17 33879710 33879788 -51558692 - MIR SINE MIR -167 95 18 753 307 40 9 chr17 33880234 33880459 -51558021 + MIR SINE MIR 12 243 -19 337 207 12 24 chr17 33880613 33880695 -51557785 + MIR SINE MIR 73 153 -109 2318 282 139 29 chr17 33880754 33881990 -51556490 + L2 LINE L2 1786 3179 -134 243 0 0 0 chr17 33881990 33882017 -51556463 + (TG)n Simple_repeat Simple_repeat 1 27 0 2318 282 139 29 chr17 33882017 33882165 -51556315 + L2 LINE L2 3179 3309 -4 397 315 8 8 chr17 33882153 33882280 -51556200 + MIR SINE MIR 134 260 -2 * 2325 118 0 0 chr17 33882850 33883156 -51555324 - AluSg SINE Alu -4 306 1 458 211 226 8 chr17 33883230 33883363 -51555117 - MIR SINE MIR -32 230 69 322 291 42 48 chr17 33883379 33883544 -51554936 + MIR SINE MIR 15 178 -84 378 0 0 0 chr17 33883598 33883640 -51554840 + (TG)n Simple_repeat Simple_repeat 2 43 0 518 278 106 0 chr17 33884060 33884211 -51554269 + MER5A DNA MER1_type 22 188 -1 499 240 8 25 chr17 33887444 33887565 -51550915 + MIR SINE MIR 102 220 -42 1192 224 113 82 chr17 33888825 33889031 -51549449 - L2 LINE L2 -1 3312 3114 2556 66 7 0 chr17 33889031 33889336 -51549144 + AluSp SINE Alu 1 307 -6 1192 224 113 82 chr17 33889336 33889384 -51549096 - L2 LINE L2 -199 3114 3069 2241 116 0 22 chr17 33889384 33889703 -51548777 - AluSx SINE Alu 0 312 1 1192 224 113 82 chr17 33889703 33890303 -51548177 - L2 LINE L2 -244 3069 2434 1935 154 26 3 chr17 33890329 33890634 -51547846 + AluJo SINE Alu 1 312 0 1341 154 75 161 chr17 33890821 33891098 -51547382 - MSTB LTR MaLR 0 426 204 7697 32 0 0 chr17 33891098 33892492 -51545988 - L1PA5 LINE L1 -6 6148 4754 1341 154 75 161 chr17 33892492 33892680 -51545800 - MSTB LTR MaLR -222 204 1 502 260 54 78 chr17 33892675 33892917 -51545563 - L2 LINE L2 -3 3310 3075 * 1604 204 124 32 chr17 33893067 33893528 -51544952 - MLT1D LTR MaLR -2 503 1 681 190 190 32 chr17 33893869 33894090 -51544390 + MIR SINE MIR 5 260 -2 514 250 61 15 chr17 33894144 33894276 -51544204 + L2 LINE L2 3176 3313 0 361 299 118 84 chr17 33894852 33895173 -51543307 - L2 LINE L2 -6 3266 2935 2206 103 0 50 chr17 33896084 33896403 -51542077 + AluSx SINE Alu 1 303 -9 236 121 0 0 chr17 33896681 33896714 -51541766 + Alu SINE Alu 2 34 -274 956 169 0 42 chr17 33896714 33896880 -51541600 + AluSg/x SINE Alu 126 284 -26 357 292 0 26 chr17 33896938 33897051 -51541429 + MIR SINE MIR 88 197 -65 469 297 51 0 chr17 33897330 33897468 -51541012 + L2 LINE L2 3167 3311 -2 2366 87 13 0 chr17 33897763 33898061 -51540419 - AluSx SINE Alu -10 302 1 2530 64 0 0 chr17 33898586 33898881 -51539599 - AluY SINE Alu -16 295 1 272 250 38 25 chr17 33899265 33899345 -51539135 + L2 LINE L2 3191 3271 -1 285 341 49 16 chr17 33899814 33899937 -51538543 + L2 LINE L2 3140 3266 -6 337 289 156 16 chr17 33899954 33900082 -51538398 - L2 LINE L2 -6 3266 3121 2344 96 0 0 chr17 33901647 33901969 -51536511 + AluSx SINE Alu 1 322 0 2311 99 3 0 chr17 33902367 33902704 -51535776 + AluSx SINE Alu 1 338 0 346 260 47 60 chr17 33903188 33903338 -51535142 + MIR SINE MIR 2 149 -113 1043 170 55 89 chr17 33903495 33903766 -51534714 + MIR SINE MIR 1 262 0 2251 115 3 0 chr17 33904133 33904429 -51534051 + AluSx SINE Alu 1 297 -15 344 324 37 32 chr17 33904805 33905089 -51533391 + L3 LINE CR1 670 1026 -551 1963 157 6 10 chr17 33905146 33905459 -51533021 - AluJb SINE Alu 0 312 1 1035 124 0 0 chr17 33905463 33905600 -51532880 - AluJb SINE Alu -175 137 1 468 278 335 8 chr17 33905600 33905970 -51532510 + L3 LINE CR1 1086 1576 -1 572 228 0 0 chr17 33906116 33906217 -51532263 + FRAM SINE Alu 1 101 -75 478 183 150 113 chr17 34006218 34006345 -51432135 + MER2 DNA MER2_type 125 265 -80 1667 183 14 3 chr17 34006345 34006629 -51431851 - AluJo SINE Alu -25 287 1 478 183 150 113 chr17 34006629 34006714 -51431766 + MER2 DNA MER2_type 265 345 0 1898 171 97 40 chr17 34008001 34008476 -51430004 - MLT1D LTR MaLR 0 505 4 1059 138 24 48 chr17 34008646 34008856 -51429624 + MER3 DNA MER1_type 5 209 0 14368 189 31 20 chr17 34009105 34011908 -51426572 - L1P4 LINE L1 -532 6337 3491 2191 59 17 35 chr17 34011908 34012235 -51426245 - AluY SINE Alu 0 322 1 14368 189 31 20 chr17 34012235 34013117 -51425363 - L1P4 LINE L1 -3378 3491 2620 2064 164 3 0 chr17 34013331 34013648 -51424832 + 7SLRNA srpRNA srpRNA 3 320 0 288 164 75 0 chr17 34013672 34013739 -51424741 - MIR SINE MIR -84 178 107 465 241 22 50 chr17 34014321 34014565 -51423915 + MER41B LTR ERV1 53 430 -205 1697 100 32 17 chr17 34014673 34015019 -51423461 + MLT2A1 LTR ERVL 1 444 0 6974 119 17 35 chr17 34015019 34016393 -51422087 + HERVL-A1 LTR ERVL 1 1352 -4412 * 16677 58 18 0 chr17 34016391 34018407 -51420073 + HERVL-A1 LTR ERVL 2491 4542 -1112 210 269 154 0 chr17 34018757 34018835 -51419645 - MIR SINE MIR -65 197 108 294 338 100 6 chr17 34018847 34019007 -51419473 - MIR SINE MIR -25 237 63 319 224 24 0 chr17 34019137 34019222 -51419258 + MIR SINE MIR 90 176 -86 232 312 18 9 chr17 34019892 34020001 -51418479 - L3 LINE CR1 -176 1401 1292 340 301 121 12 chr17 34020671 34020837 -51417643 - MIR3 SINE MIR -9 199 16 524 281 68 36 chr17 34021749 34021970 -51416510 - MIR SINE MIR -15 247 20 1560 196 11 4 chr17 34022254 34022569 -51415911 + AluJb SINE Alu 1 317 0 6682 79 3 18 chr17 34022904 34024367 -51414113 + L1PA15 LINE L1 4728 6162 -3 246 320 22 90 chr17 34025418 34025596 -51412884 + L2 LINE L2 3028 3193 -79 238 242 158 11 chr17 34026158 34026253 -51412227 - MIR SINE MIR -70 138 30 206 306 0 0 chr17 34026954 34027016 -51411464 - L2 LINE L2 -8 3305 3244 2274 114 0 3 chr17 34027102 34027400 -51411080 + AluSx SINE Alu 1 297 -15 232 202 60 12 chr17 34027414 34027498 -51410982 - L1ME4a LINE L1 -4 6117 6030 280 254 31 46 chr17 34027605 34027735 -51410745 - L1ME4a LINE L1 -279 5842 5715 710 306 18 4 chr17 34027867 34028096 -51410384 - MIR SINE MIR 0 262 31 2208 98 3 46 chr17 34028271 34028597 -51409883 + AluSx SINE Alu 1 312 0 1877 139 0 21 chr17 34029014 34029301 -51409179 + AluSx SINE Alu 1 281 -31 1392 56 0 0 chr17 34029308 34029486 -51408994 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 510 110 40 10 chr17 34029488 34029588 -51408892 + GA-rich Low_complexity Low_complexity 3 105 0 252 359 60 10 chr17 34029595 34029893 -51408587 - L2 LINE L2 -650 2664 2352 828 71 47 24 chr17 34030557 34030726 -51407754 + CT-rich Low_complexity Low_complexity 2 174 0 2035 114 28 3 chr17 34030828 34031117 -51407363 - AluSx SINE Alu -12 300 5 243 61 0 0 chr17 34031196 34031229 -51407251 + (TG)n Simple_repeat Simple_repeat 2 34 0 1090 112 0 0 chr17 34031229 34031381 -51407099 - L1PA13 LINE L1 -15 6148 5997 280 322 11 0 chr17 34031468 34031558 -51406922 - L2 LINE L2 0 3272 3182 612 311 40 9 chr17 34032071 34032293 -51406187 + MIR SINE MIR 33 261 -1 226 223 29 39 chr17 34033805 34033908 -51404572 - L1ME4a LINE L1 -40 6081 5980 341 165 0 13 chr17 34033948 34034027 -51404453 + (TA)n Simple_repeat Simple_repeat 2 79 0 25 65 0 0 chr17 34036545 34036591 -51401889 + AT_rich Low_complexity Low_complexity 1 46 0 461 330 20 25 chr17 34037133 34037336 -51401144 - MIR SINE MIR -48 214 13 225 250 52 31 chr17 34037476 34037572 -51400908 + MER5B DNA MER1_type 81 178 0 395 254 88 123 chr17 34038014 34038504 -51399976 + L1ME4a LINE L1 5606 6081 -40 198 0 0 0 chr17 34038723 34038745 -51399735 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 411 21 0 0 chr17 34038744 34038792 -51399688 + (CA)n Simple_repeat Simple_repeat 1 48 0 2231 101 3 3 chr17 34039507 34039804 -51398676 - AluSg SINE Alu -13 297 1 594 194 103 24 chr17 34040289 34040454 -51398026 + MER5A DNA MER1_type 11 188 -1 583 265 75 46 chr17 34041730 34042036 -51396444 - L1ME4a LINE L1 -225 5896 5582 414 336 0 0 chr17 34044746 34044883 -51393597 - MIR SINE MIR -77 185 49 229 35 0 0 chr17 34045034 34045063 -51393417 + (TTTG)n Simple_repeat Simple_repeat 4 172 0 2051 129 3 0 chr17 34045063 34045350 -51393130 - AluSx SINE Alu -1 316 1 772 296 9 0 chr17 34045543 34045763 -51392717 + MER58A DNA MER1_type 3 224 0 344 316 97 45 chr17 34045954 34046062 -51392418 + L1MC4a LINE L1 5563 5664 -2144 2052 131 3 0 chr17 34046062 34046352 -51392128 + AluSx SINE Alu 1 291 -21 344 316 97 45 chr17 34046352 34046531 -51391949 + L1MC4a LINE L1 5664 5865 -1943 240 59 0 0 chr17 34047060 34047094 -51391386 + (CA)n Simple_repeat Simple_repeat 2 35 0 357 252 89 16 chr17 34047539 34047750 -51390730 + MLT1J2 LTR MaLR 63 330 -120 748 245 27 0 chr17 34047756 34047940 -51390540 + MER5A DNA MER1_type 1 189 0 877 203 6 28 chr17 34048367 34048544 -51389936 + AluJo SINE Alu 2 174 -138 317 365 54 0 chr17 34048794 34048942 -51389538 - MER91A DNA MER1_type -2 194 39 410 250 0 10 chr17 34049031 34049127 -51389353 + MER94 DNA DNA 40 134 0 2226 101 3 0 chr17 34049664 34049974 -51388506 + AluSq SINE Alu 1 311 0 495 284 82 103 chr17 34050374 34050410 -51388070 + MLT1K LTR MaLR 182 217 -371 1311 197 27 104 chr17 34050410 34050775 -51387705 - MER58B DNA MER1_type -4 337 1 495 284 82 103 chr17 34050775 34051154 -51387326 + MLT1K LTR MaLR 217 588 0 2283 131 39 152 chr17 34051672 34052258 -51386222 - MLT2B1 LTR ERVL 0 520 1 776 198 12 12 chr17 34052612 34052784 -51385696 + MER5B DNA MER1_type 1 172 -6 620 154 231 19 chr17 34052915 34053071 -51385409 - MER53 DNA DNA 0 189 1 1016 74 27 20 chr17 34055460 34055609 -51382871 - L1PA13 LINE L1 0 6163 6014 1502 166 63 46 chr17 34055907 34056191 -51382289 + AluJo SINE Alu 1 289 -23 372 307 27 27 chr17 34056234 34056384 -51382096 - MLT1L LTR MaLR -124 491 342 1968 182 17 14 chr17 34056893 34057240 -51381240 - MER7A DNA MER2_type 0 346 1 377 303 43 19 chr17 34057341 34057360 -51381120 - L1ME LINE L1 -373 5748 5731 2199 135 0 0 chr17 34057360 34057657 -51380823 - AluSx SINE Alu -15 297 1 377 303 43 19 chr17 34057657 34057799 -51380681 - L1ME LINE L1 -390 5731 5583 411 316 51 0 chr17 34059639 34059835 -51378645 + L1MEc LINE L1 1597 1802 -4594 633 260 43 25 chr17 34061144 34061379 -51377101 - L1ME LINE L1 -983 5163 4925 1211 206 97 77 chr17 34061408 34061811 -51376669 - MLT2B1 LTR ERVL 0 520 110 230 270 40 0 chr17 34061818 34061892 -51376588 - L1ME LINE L1 -1312 4834 4758 1821 278 55 48 chr17 34061893 34062030 -51376450 - HERV16 LTR ERVL -2077 2919 2784 2444 97 3 0 chr17 34062030 34062341 -51376139 - AluSp SINE Alu -1 312 1 1821 278 55 48 chr17 34062341 34062916 -51375564 - HERV16 LTR ERVL -2212 2784 2202 1782 287 37 61 chr17 34062914 34063664 -51374816 - HERV16 LTR ERVL -3444 1552 821 * 225 316 44 37 chr17 34063696 34063832 -51374648 + L1ME1 LINE L1 3507 3643 -2572 426 235 25 0 chr17 34063833 34063952 -51374528 + L1ME1 LINE L1 4957 5078 -1137 559 209 0 0 chr17 34064051 34064161 -51374319 + AluSg/x SINE Alu 198 307 -3 1040 229 33 33 chr17 34064164 34064496 -51373984 + L1ME1 LINE L1 5119 5450 -765 1519 204 152 18 chr17 34064556 34064998 -51373482 + MLT1D LTR MaLR 1 501 -4 913 277 127 3 chr17 34065036 34065343 -51373137 + MLT1H1 LTR MaLR 10 354 -201 2464 89 0 0 chr17 34065656 34065960 -51372520 - AluSc SINE Alu -5 304 1 1569 203 33 3 chr17 34068358 34068659 -51369821 + AluJb SINE Alu 1 310 -2 412 267 111 6 chr17 34068691 34068871 -51369609 - MIR SINE MIR -49 213 15 427 163 0 25 chr17 34069307 34069387 -51369093 - AluJb SINE Alu -75 237 160 376 192 8 108 chr17 34070093 34070213 -51368267 + L1ME1 LINE L1 5758 5865 -446 187 104 42 0 chr17 34070233 34070281 -51368199 + (TG)n Simple_repeat Simple_repeat 1 50 0 2119 121 0 0 chr17 34070282 34070563 -51367917 - AluSg SINE Alu -29 281 1 1711 152 3 14 chr17 34070711 34071007 -51367473 - L1PB4 LINE L1 -3 6153 5861 1361 261 71 25 chr17 34071117 34072011 -51366469 - L1PBb LINE L1 -4798 1405 372 357 264 48 32 chr17 34072248 34072373 -51366107 - L1PBb LINE L1 -5957 247 121 24 67 0 0 chr17 34073046 34073091 -51365389 + AT_rich Low_complexity Low_complexity 1 45 0 1603 190 34 39 chr17 34073112 34073173 -51365307 + L1ME1 LINE L1 5848 5908 -327 2696 159 5 2 chr17 34073173 34073600 -51364880 + MSTA LTR MaLR 1 428 0 1603 190 34 39 chr17 34073600 34073923 -51364557 + L1ME1 LINE L1 5908 6230 -5 369 0 0 0 chr17 34073946 34073987 -51364493 + (CA)n Simple_repeat Simple_repeat 2 42 0 359 307 6 42 chr17 34074068 34074234 -51364246 + L1MCc LINE L1 293 452 -5971 913 289 108 48 chr17 34074798 34075738 -51362742 + L1MCc LINE L1 1171 2435 -4687 1645 189 31 3 chr17 34075738 34076029 -51362451 + AluJo SINE Alu 1 299 -13 913 289 108 48 chr17 34076029 34076355 -51362125 + L1MCc LINE L1 2435 2740 -4382 1130 254 4 34 chr17 34076421 34076769 -51361711 + L1ME2 LINE L1 5815 6155 -9 3247 222 74 32 chr17 34076810 34076985 -51361495 + L1MCc LINE L1 2905 3071 -3870 2486 90 0 0 chr17 34076985 34077296 -51361184 + AluY SINE Alu 1 311 0 3247 222 74 32 chr17 34077296 34078205 -51360275 + L1MCc LINE L1 3071 4034 -2907 2443 35 11 7 chr17 34078566 34078851 -51359629 + AluY SINE Alu 1 286 -25 411 21 0 0 chr17 34078858 34078906 -51359574 + (CAT)n Simple_repeat Simple_repeat 2 49 0 249 197 0 0 chr17 34079514 34079575 -51358905 + CT-rich Low_complexity Low_complexity 4 64 0 798 277 113 27 chr17 34079638 34080046 -51358434 + L1ME3A LINE L1 5497 5939 -231 1817 155 3 10 chr17 34080046 34080337 -51358143 + AluJb SINE Alu 1 289 -23 648 119 45 0 chr17 34080559 34080785 -51357695 + (TA)n Simple_repeat Simple_repeat 1 236 0 2263 108 3 7 chr17 34080797 34081102 -51357378 + AluSq SINE Alu 1 304 -9 2454 71 3 0 chr17 34081105 34081399 -51357081 + AluSp SINE Alu 1 295 -18 209 260 164 0 chr17 34081924 34081997 -51356483 + L2 LINE L2 3229 3313 0 2589 56 0 3 chr17 34082387 34082691 -51355789 - AluY SINE Alu -8 303 1 209 286 99 22 chr17 34082716 34082807 -51355673 + L3 LINE CR1 284 381 -1196 1730 130 52 0 chr17 34082917 34083187 -51355293 - MER7A DNA MER2_type 0 346 65 688 174 43 0 chr17 34083237 34083352 -51355128 + Tigger3(Golem) DNA MER2_type 2904 3023 -6 304 231 0 0 chr17 34083345 34083397 -51355083 - Tigger3(Golem) DNA MER2_type -2976 53 2 * 2246 111 0 0 chr17 34083764 34084052 -51354428 + AluSx SINE Alu 1 288 -24 505 209 0 115 chr17 34084061 34084243 -51354237 + L1MD3 LINE L1 7825 7985 -10 1984 159 0 7 chr17 34084453 34084761 -51353719 + AluJb SINE Alu 3 308 -4 666 269 5 30 chr17 34084915 34085112 -51353368 + MIR SINE MIR 67 258 -4 267 254 111 24 chr17 34085121 34085247 -51353233 - MIR SINE MIR -52 210 74 180 345 92 23 chr17 34085271 34085445 -51353035 + MIR SINE MIR 28 213 -49 2588 169 65 27 chr17 34085452 34085972 -51352508 - MER34 LTR ERV1 -2 540 1 556 275 121 54 chr17 34087825 34088196 -51350284 - L2 LINE L2 -45 3268 2873 605 299 104 0 chr17 34088232 34088463 -51350017 - L2 LINE L2 -561 2753 2499 3162 134 18 21 chr17 34089040 34089553 -51348927 - LTR10D LTR ERV1 -2 511 1 402 326 210 12 chr17 34089980 34090308 -51348172 + L2 LINE L2 2920 3312 -1 919 130 0 32 chr17 34090309 34090494 -51347986 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 987 201 4 46 chr17 34090514 34090753 -51347727 + MER96B DNA MER1_type? 186 414 -3 516 218 177 14 chr17 34091362 34091509 -51346971 - MER45A DNA AcHobo -7 171 1 3134 152 11 9 chr17 34092422 34092947 -51345533 + L1MD1 LINE L1 5628 6153 -89 2403 134 8 138 chr17 34092947 34093373 -51345107 - MER65C LTR ERV1 0 461 116 2349 97 7 0 chr17 34093373 34093681 -51344799 - AluSg SINE Alu 0 310 1 2403 134 8 138 chr17 34093681 34093783 -51344697 - MER65C LTR ERV1 -345 116 2 629 70 0 60 chr17 34093783 34093883 -51344597 + L1MD1 LINE L1 6149 6242 0 435 299 16 57 chr17 34094001 34094195 -51344285 + MIR SINE MIR 47 232 -30 1630 174 10 24 chr17 34094534 34094827 -51343653 + AluJb SINE Alu 1 289 -23 458 225 28 94 chr17 34094934 34095176 -51343304 - MLT1H LTR MaLR -2 547 241 1410 102 0 0 chr17 34095789 34095975 -51342505 + L1P3 LINE L1 8 193 -6268 843 216 47 28 chr17 34095975 34096188 -51342292 + LTR3 LTR ERVK 211 427 -5 22009 106 15 29 chr17 34096197 34100360 -51338120 + L1P3 LINE L1 191 4393 -2068 2044 226 75 47 chr17 34100708 34101305 -51337175 + MER21B LTR ERV1 98 711 -152 466 245 0 9 chr17 34101349 34101455 -51337025 - L2 LINE L2 -757 2557 2453 188 274 154 60 chr17 34102505 34102622 -51335858 - MIR3 SINE MIR 0 208 81 382 229 18 55 chr17 34102639 34102748 -51335732 - MIR SINE MIR -5 257 153 432 262 29 0 chr17 34102819 34102922 -51335558 - MIR SINE MIR -105 157 52 274 181 60 15 chr17 34103172 34103305 -51335175 + (TTATA)n Simple_repeat Simple_repeat 3 141 0 21 0 0 0 chr17 34103309 34103330 -51335150 + AT_rich Low_complexity Low_complexity 1 21 0 3671 83 14 2 chr17 34103345 34103836 -51334644 + L1PA8 LINE L1 5667 6163 -9 56 71 0 0 chr17 34103836 34103948 -51334532 + AT_rich Low_complexity Low_complexity 1 112 0 2137 96 0 23 chr17 34103948 34104251 -51334229 - AluSx SINE Alu -16 296 1 427 214 0 0 chr17 34104377 34104461 -51334019 - MER46C DNA MER2_type 0 338 255 2492 164 36 95 chr17 34104462 34105064 -51333416 + L1MB3 LINE L1 5616 6182 -1 539 297 81 5 chr17 34105103 34105312 -51333168 - MER46C DNA MER2_type -110 228 4 656 172 55 0 chr17 34106946 34107074 -51331406 - AluJb SINE Alu -21 291 157 543 261 55 20 chr17 34107088 34107415 -51331065 - LTR46 LTR ERV1 -30 430 1 2468 171 125 63 chr17 34107415 34108157 -51330323 - LTR1B LTR ERV1 -6 779 1 2534 147 29 10 chr17 34108157 34108573 -51329907 - HUERS-P2 LTR ERV1 0 3088 2665 15718 163 39 17 chr17 34108573 34111311 -51327169 - HUERS-P2 LTR ERV1 -287 2801 2 2778 163 98 141 chr17 34111312 34112175 -51326305 - LTR1B LTR ERV1 0 826 1 226 204 0 56 chr17 34112176 34112212 -51326268 - AluSc SINE Alu -132 167 133 834 168 0 0 chr17 34112212 34112343 -51326137 - AluJo/FLAM SINE Alu -171 131 1 226 204 0 56 chr17 34112343 34112360 -51326120 - AluSc SINE Alu -166 133 117 1151 189 55 108 chr17 34112423 34112869 -51325611 - LTR37B LTR ERV1 -2 466 45 2319 90 0 0 chr17 34112869 34113170 -51325310 - AluSg SINE Alu -7 303 3 1151 189 55 108 chr17 34113170 34113194 -51325286 - LTR37B LTR ERV1 -423 45 21 3826 169 33 21 chr17 34113213 34113378 -51325102 - MER50 LTR ERV1 -1 733 572 1893 145 27 0 chr17 34113378 34113675 -51324805 + AluSx SINE Alu 1 305 -7 3826 169 33 21 chr17 34113675 34114233 -51324247 - MER50 LTR ERV1 -162 572 1 22 88 0 0 chr17 34114294 34114351 -51324129 + AT_rich Low_complexity Low_complexity 1 57 0 966 163 11 6 chr17 34114691 34114869 -51323611 + FRAM SINE Alu 1 176 0 2396 149 29 0 chr17 34114976 34115359 -51323121 + MER57A LTR ERV1 1 394 -9 3202 145 78 22 chr17 34115463 34116049 -51322431 + LTR8A LTR ERV1 1 619 -108 281 170 0 0 chr17 34116127 34116174 -51322306 + L1MB1 LINE L1 6104 6150 -18 1374 163 100 7 chr17 34116179 34116449 -51322031 - AluJo SINE Alu -17 295 1 252 0 0 0 chr17 34116468 34116496 -51321984 + (CA)n Simple_repeat Simple_repeat 1 28 0 202 368 23 0 chr17 34116885 34116972 -51321508 - L2 LINE L2 -491 2823 2735 1790 104 8 8 chr17 34117192 34117452 -51321028 + AluSq SINE Alu 38 297 -16 2483 143 16 3 chr17 34117464 34118070 -51320410 + MER50 LTR ERV1 7 711 -23 204 239 110 46 chr17 34118893 34119002 -51319478 - MIR3 SINE MIR -7 201 86 1702 216 54 62 chr17 34119019 34119519 -51318961 - MER74B LTR ERVL -16 606 111 2076 108 3 7 chr17 34119520 34119826 -51318654 - AluSx SINE Alu -7 305 1 2472 53 0 0 chr17 34119836 34120136 -51318344 - AluY SINE Alu -11 300 1 694 269 71 18 chr17 34120159 34120245 -51318235 - MER46C DNA MER2_type 0 338 258 1748 157 10 3 chr17 34120245 34120544 -51317936 + AluJo SINE Alu 2 302 -10 694 269 71 18 chr17 34120544 34120739 -51317741 - MER46C DNA MER2_type -80 258 42 262 188 35 47 chr17 34122356 34122441 -51316039 - HAL1b LINE L1 -236 1112 1029 261 0 0 0 chr17 34122814 34122843 -51315637 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1418 138 9 0 chr17 34123194 34123412 -51315068 - AluSq SINE Alu -93 220 1 319 223 107 18 chr17 34123416 34123528 -51314952 + LTR67 LTR ERVL 434 555 -2 418 286 55 29 chr17 34123535 34123773 -51314707 - HAL1 LINE L1 -840 1667 1424 5734 105 24 3 chr17 34123780 34125517 -51312963 - L1PA16 LINE L1 0 6166 4390 234 0 0 0 chr17 34125517 34125543 -51312937 + (TG)n Simple_repeat Simple_repeat 1 26 0 5734 105 24 3 chr17 34125543 34125704 -51312776 - L1PA16 LINE L1 -1776 4390 4234 2104 130 0 0 chr17 34126119 34126427 -51312053 - AluSx SINE Alu -4 308 1 1664 147 10 23 chr17 34126599 34126899 -51311581 - AluJb SINE Alu -15 297 2 2020 123 0 0 chr17 34127296 34127589 -51310891 - AluSx SINE Alu -9 303 11 265 302 112 22 chr17 34127712 34127891 -51310589 + L2 LINE L2 2888 3082 -190 294 258 54 32 chr17 34127917 34128010 -51310470 - L2 LINE L2 0 3313 3219 2285 98 0 0 chr17 34128043 34128350 -51310130 + AluSx SINE Alu 1 307 -5 810 186 13 6 chr17 34128595 34128751 -51309729 - MER5A DNA MER1_type -1 188 32 1897 139 0 26 chr17 34129049 34129358 -51309122 + AluJb SINE Alu 1 301 -11 1863 95 95 0 chr17 34129424 34129697 -51308783 + AluSq SINE Alu 1 299 -14 1609 244 6 72 chr17 34129909 34130115 -51308365 + L1MC4 LINE L1 6444 6662 -1380 1851 139 23 0 chr17 34130115 34130417 -51308063 + AluSx SINE Alu 1 309 -3 1609 244 6 72 chr17 34130417 34130723 -51307757 + L1MC4 LINE L1 6662 6922 -1120 452 266 0 0 chr17 34130795 34130908 -51307572 + HAL1 LINE L1 1574 1686 -821 21 0 0 0 chr17 34130958 34130979 -51307501 + AT_rich Low_complexity Low_complexity 1 21 0 968 254 122 32 chr17 34131176 34131586 -51306894 + MLT1J2 LTR MaLR 1 447 -3 235 277 89 27 chr17 34132094 34132206 -51306274 + MIR SINE MIR 22 140 -68 378 261 255 0 chr17 34132227 34132380 -51306100 - MER117 DNA MER1_type -5 192 1 458 296 251 15 chr17 34132551 34132750 -51305730 + MIR SINE MIR 5 250 -12 211 293 132 0 chr17 34134892 34134998 -51303482 - MIR3 SINE MIR -52 156 37 237 289 13 40 chr17 34136838 34136914 -51301566 + L2 LINE L2 3178 3251 -21 207 0 0 0 chr17 34136914 34136937 -51301543 + (TGGA)n Simple_repeat Simple_repeat 4 26 0 687 163 0 0 chr17 34136956 34137103 -51301377 + GA-rich Low_complexity Low_complexity 2 148 0 629 289 138 26 chr17 34137346 34137651 -51300829 + L2 LINE L2 2 340 -2974 333 281 193 6 chr17 34138172 34138343 -51300137 + MIR SINE MIR 5 207 -55 180 77 0 0 chr17 34139432 34139458 -51299022 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2231 95 7 0 chr17 34139461 34139765 -51298715 - AluSq SINE Alu -7 306 1 715 269 34 34 chr17 34140320 34140554 -51297926 - MIR SINE MIR 0 262 29 402 333 47 85 chr17 34140683 34140863 -51297617 + L2 LINE L2 2805 2990 -282 2212 82 24 0 chr17 34140863 34141155 -51297325 - AluSx SINE Alu -13 299 1 402 333 47 85 chr17 34141155 34141446 -51297034 + L2 LINE L2 2990 3258 -14 226 289 48 12 chr17 34141958 34142041 -51296439 + MIR SINE MIR 2 87 -175 1899 126 0 49 chr17 34142646 34142971 -51295509 - AluJb SINE Alu -3 309 1 186 227 0 0 chr17 34143336 34143380 -51295100 + GA-rich Low_complexity Low_complexity 1 44 0 2445 36 3 7 chr17 34143901 34144206 -51294274 + AluY SINE Alu 1 304 -7 1915 116 20 14 chr17 34144492 34144784 -51293696 + AluSx SINE Alu 1 294 -18 1585 132 45 42 chr17 34144894 34145182 -51293298 + AluJb SINE Alu 1 289 -23 270 0 0 0 chr17 34145183 34145213 -51293267 + (TG)n Simple_repeat Simple_repeat 2 31 0 1473 177 0 62 chr17 34145226 34145531 -51292949 + AluJb SINE Alu 1 286 -26 348 235 0 0 chr17 34145534 34145602 -51292878 + L1MC4 LINE L1 6636 6703 -1339 2149 161 38 17 chr17 34145602 34146019 -51292461 - L1MB3 LINE L1 -19 6164 5739 189 0 0 0 chr17 34146582 34146603 -51291877 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1086 144 0 44 chr17 34147312 34147493 -51290987 + FAM SINE Alu 1 173 -2 543 222 169 5 chr17 34147509 34147698 -51290782 + MIR SINE MIR 27 246 -16 261 308 11 0 chr17 34147766 34147857 -51290623 - MIR SINE MIR -64 144 53 271 164 164 0 chr17 34148120 34148187 -51290293 + MIR SINE MIR 103 180 -82 2253 108 3 0 chr17 34148539 34148835 -51289645 + AluSx SINE Alu 1 297 -15 222 303 0 0 chr17 34148861 34148927 -51289553 + MIR SINE MIR 170 235 -27 2282 102 3 10 chr17 34149188 34149492 -51288988 + AluSp SINE Alu 1 302 -11 405 141 244 0 chr17 34149770 34149848 -51288632 + AluSp/q SINE Alu 206 302 -1 644 223 43 0 chr17 34149885 34150024 -51288456 - MER105 DNA DNA -16 188 44 1884 104 0 41 chr17 34150678 34150946 -51287534 + AluSx SINE Alu 37 293 -19 1254 177 19 144 chr17 34151223 34151359 -51287121 + AluYb8 SINE Alu 1 152 -235 2372 91 0 16 chr17 34151359 34151666 -51286814 + AluSc SINE Alu 1 302 -7 1254 177 19 144 chr17 34151666 34151961 -51286519 + AluYb8 SINE Alu 152 387 0 2535 55 0 0 chr17 34152194 34152485 -51285995 - AluY SINE Alu -20 291 1 252 263 0 50 chr17 34152495 34152575 -51285905 + MIR3 SINE MIR 130 205 -3 779 227 49 16 chr17 34152757 34152942 -51285538 + MER58C DNA MER1_type 15 205 -10 21 36 0 0 chr17 34153072 34153100 -51285380 + AT_rich Low_complexity Low_complexity 1 28 0 2088 141 7 0 chr17 34153100 34153406 -51285074 + AluSg SINE Alu 1 308 -2 2501 72 0 22 chr17 34154966 34155284 -51283196 - AluY SINE Alu 0 311 1 2838 170 16 33 chr17 34155763 34156340 -51282140 - L1MB8 LINE L1 -1 6177 5611 188 320 115 0 chr17 34156707 34156785 -51281695 - MIR3 SINE MIR -15 193 107 1932 117 0 68 chr17 34156795 34156954 -51281526 - AluSx SINE Alu -26 286 156 2438 63 0 10 chr17 34156954 34157255 -51281225 - AluY SINE Alu -13 298 1 1932 117 0 68 chr17 34157255 34157402 -51281078 - AluSx SINE Alu -156 156 1 896 239 159 25 chr17 34157534 34158057 -51280423 - HAL1 LINE L1 -3 2504 1912 1294 94 64 44 chr17 34158091 34158294 -51280186 - AluSc SINE Alu -2 307 101 1585 254 80 13 chr17 34158406 34158728 -51279752 - HAL1 LINE L1 -755 1752 1453 2589 44 0 19 chr17 34158728 34159045 -51279435 - AluY SINE Alu 0 311 1 1585 254 80 13 chr17 34159045 34159230 -51279250 - HAL1 LINE L1 -1054 1453 1205 1660 133 4 0 chr17 34159230 34159463 -51279017 + AluSq SINE Alu 1 234 -79 1585 254 80 13 chr17 34159463 34159489 -51278991 - HAL1 LINE L1 -1302 1205 1182 371 267 80 27 chr17 34159588 34159738 -51278742 - MIR SINE MIR -57 205 48 766 229 24 0 chr17 34159745 34159911 -51278569 - MIR SINE MIR -91 171 2 283 67 22 0 chr17 34160729 34160774 -51277706 + L2 LINE L2 3191 3236 -36 697 187 18 164 chr17 34160952 34161177 -51277303 - MER20 DNA MER1_type -26 193 2 805 330 55 57 chr17 34161183 34161620 -51276860 + L2 LINE L2 2836 3271 -1 654 272 85 37 chr17 34162063 34162464 -51276016 + L1M4 LINE L1 4736 5155 -991 1329 159 0 44 chr17 34162470 34162697 -51275783 + AluJo SINE Alu 84 300 -12 2950 145 29 6 chr17 34162781 34163436 -51275044 + L1M2 LINE L1 5101 5768 -523 3632 132 16 33 chr17 34163453 34163931 -51274549 + L1PA15 LINE L1 5566 6033 -132 2210 124 0 9 chr17 34163931 34164246 -51274234 + AluSx SINE Alu 1 312 0 3632 132 16 33 chr17 34164246 34164375 -51274105 + L1PA15 LINE L1 6033 6163 -2 207 69 0 0 chr17 34164416 34164445 -51274035 + (TG)n Simple_repeat Simple_repeat 2 30 0 6259 116 16 27 chr17 34164673 34165248 -51273232 + Tigger1 DNA MER2_type 963 1524 -894 2331 89 0 29 chr17 34165248 34165564 -51272916 - AluY SINE Alu -4 307 1 6259 116 16 27 chr17 34165564 34165949 -51272531 + Tigger1 DNA MER2_type 1524 1912 -506 7848 137 41 41 chr17 34165949 34166748 -51271732 + L1P3 LINE L1 465 1263 -5198 186 71 0 0 chr17 34166748 34166776 -51271704 + (CAA)n Simple_repeat Simple_repeat 1 28 0 7848 137 41 41 chr17 34166776 34167640 -51270840 + L1P3 LINE L1 1263 2153 -4308 2050 117 59 0 chr17 34167640 34167930 -51270550 + AluSx SINE Alu 1 307 -5 7848 137 41 41 chr17 34167930 34168224 -51270256 + L1P3 LINE L1 2153 2446 -4015 2335 58 3 48 chr17 34168295 34168604 -51269876 - AluY SINE Alu -16 295 1 614 211 60 25 chr17 34169097 34169296 -51269184 + L1MC5 LINE L1 7453 7658 -303 247 323 110 24 chr17 34169374 34169501 -51268979 + MIR3 SINE MIR 12 149 -59 313 231 94 26 chr17 34170324 34170441 -51268039 + MIR SINE MIR 48 172 -90 1792 130 65 3 chr17 34170496 34170788 -51267692 - AluJo SINE Alu 0 312 3 2391 53 4 0 chr17 34170818 34171122 -51267358 - AluY SINE Alu 0 305 1 2284 117 3 0 chr17 34171247 34171556 -51266924 - AluSx SINE Alu 0 312 3 2115 126 3 3 chr17 34171811 34172113 -51266367 - AluSq SINE Alu -11 302 1 2458 66 7 0 chr17 34172235 34172536 -51265944 + AluSp SINE Alu 2 304 -9 551 245 33 7 chr17 34172915 34173012 -51265468 - L1MA10 LINE L1 -3 6331 6235 799 188 31 67 chr17 34173012 34173152 -51265328 - L1ME2 LINE L1 -152 6090 5980 2233 127 0 0 chr17 34173152 34173460 -51265020 - AluSx SINE Alu -4 308 1 799 188 31 67 chr17 34173460 34173623 -51264857 - L1ME2 LINE L1 -262 5980 5813 1028 94 0 0 chr17 34173632 34173770 -51264710 - L1MA2 LINE L1 0 6304 6167 636 129 0 0 chr17 34173771 34173856 -51264624 - MER75 DNA T2_type -429 85 1 798 161 164 31 chr17 34173867 34174221 -51264259 + Zaphod DNA AcHobo 583 983 -3048 1338 194 46 3 chr17 34174233 34174517 -51263963 + Zaphod DNA AcHobo 3626 3921 -110 1849 91 95 15 chr17 34174539 34174813 -51263667 + AluSx SINE Alu 1 296 -16 794 201 30 6 chr17 34174813 34174977 -51263503 + Zaphod DNA AcHobo 3839 4006 -25 334 185 87 43 chr17 34175756 34175848 -51262632 - MLT1K LTR MaLR -12 576 481 348 164 0 15 chr17 34176630 34176697 -51261783 - MER53 DNA DNA -123 66 1 5047 115 32 7 chr17 34176780 34177539 -51260941 - LTR19C LTR ERV1 -1 778 1 752 138 24 16 chr17 34177735 34177858 -51260622 - FLAM_C SINE Alu -18 125 2 1932 238 53 26 chr17 34177858 34178475 -51260005 - L1MC4 LINE L1 -447 7595 6962 5184 157 37 2 chr17 34178476 34179541 -51258939 + L1MB7 LINE L1 5077 6175 -9 958 213 46 14 chr17 34179550 34179766 -51258714 - L1MC4 LINE L1 -1053 6989 6767 557 213 147 0 chr17 34179768 34179918 -51258562 - MIR SINE MIR -71 191 20 216 97 0 0 chr17 34179920 34179951 -51258529 + (CA)n Simple_repeat Simple_repeat 2 32 0 926 114 0 8 chr17 34180242 34180374 -51258106 + FLAM_C SINE Alu 1 131 -2 339 200 70 26 chr17 34180397 34180512 -51257968 + L1MC5 LINE L1 7817 7936 -25 1093 248 124 3 chr17 34180963 34181302 -51257178 - L2 LINE L2 -4 3309 2930 2531 58 3 0 chr17 34181407 34181701 -51256779 - AluY SINE Alu -15 296 2 259 234 64 64 chr17 34181805 34181899 -51256581 + L2 LINE L2 3161 3254 -18 312 246 154 15 chr17 34182530 34182660 -51255820 - MIR SINE MIR -6 256 109 276 240 92 96 chr17 34183449 34183678 -51254802 - MLT1K LTR MaLR 0 588 361 21 0 0 0 chr17 34183901 34183922 -51254558 + AT_rich Low_complexity Low_complexity 1 21 0 2331 98 0 3 chr17 34183925 34184222 -51254258 + AluSx SINE Alu 1 296 -16 1175 115 18 6 chr17 34184228 34184393 -51254087 + AluSg SINE Alu 1 167 -143 450 114 13 13 chr17 34184393 34184472 -51254008 - LTR25 LTR ERV1 -686 108 30 994 95 0 14 chr17 34184491 34184638 -51253842 + AluSg SINE Alu 166 310 0 1964 162 3 10 chr17 34186190 34186365 -51252115 - AluSx SINE Alu -6 306 132 2397 86 0 3 chr17 34186365 34186666 -51251814 - AluSx SINE Alu -12 300 1 1964 162 3 10 chr17 34186666 34186798 -51251682 - AluSx SINE Alu -180 132 1 193 167 0 0 chr17 34187066 34187102 -51251378 + MIR3 SINE MIR 164 199 -9 2601 199 38 91 chr17 34187143 34187465 -51251015 + LTR8 LTR ERV1 1 338 -353 4530 147 53 4 chr17 34187465 34188222 -51250258 - LTR25 LTR ERV1 0 794 1 2601 199 38 91 chr17 34188222 34188628 -51249852 + LTR8 LTR ERV1 338 691 0 216 0 0 0 chr17 34188719 34188743 -51249737 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 209 266 43 64 chr17 34190101 34190195 -51248285 - MIR SINE MIR -67 141 50 1176 149 14 65 chr17 34190244 34190298 -51248182 + AluJo SINE Alu 86 141 -171 2185 139 0 0 chr17 34190298 34190608 -51247872 + AluSx SINE Alu 1 310 -2 1176 149 14 65 chr17 34190608 34190768 -51247712 + AluJo SINE Alu 141 289 -23 667 158 63 16 chr17 34190811 34190938 -51247542 - FLAM_A SINE Alu 0 133 1 2292 110 3 0 chr17 34190947 34191246 -51247234 - AluSx SINE Alu -12 300 1 2401 84 3 0 chr17 34191263 34191559 -51246921 - AluSp SINE Alu -16 297 1 212 0 36 0 chr17 34191638 34191666 -51246814 + (CAT)n Simple_repeat Simple_repeat 2 30 0 2321 105 3 6 chr17 34192568 34192881 -51245599 - AluSx SINE Alu 0 312 1 237 83 0 0 chr17 34192888 34192924 -51245556 + (T)n Simple_repeat Simple_repeat 1 36 0 191 335 39 45 chr17 34193169 34193324 -51245156 - L2 LINE L2 -1 3312 3159 2526 50 3 3 chr17 34193337 34193634 -51244846 + AluY SINE Alu 1 297 -14 2153 101 10 7 chr17 34193889 34194185 -51244295 - AluSc SINE Alu -10 299 3 2338 84 0 26 chr17 34194853 34195186 -51243294 - AluSc SINE Alu 0 309 1 1606 188 58 0 chr17 34195791 34195967 -51242513 - AluJo SINE Alu -2 310 109 192 40 0 0 chr17 34195967 34195992 -51242488 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1606 188 58 0 chr17 34195992 34196108 -51242372 - AluJo SINE Alu -203 109 1 2103 123 0 23 chr17 34196364 34196666 -51241814 - AluSx SINE Alu -17 295 1 1759 116 4 0 chr17 34196668 34196909 -51241571 - AluSx SINE Alu -8 304 63 481 196 62 0 chr17 34196909 34197006 -51241474 - AluSg SINE Alu -206 104 2 2586 56 0 3 chr17 34197819 34198121 -51240359 + AluY SINE Alu 1 301 -10 377 293 76 19 chr17 34198164 34198321 -51240159 + MIR SINE MIR 97 262 0 1669 174 16 10 chr17 34199285 34199595 -51238885 + AluJo SINE Alu 1 312 0 1742 146 32 111 chr17 34200336 34200714 -51237766 + Tigger3(Golem) DNA MER2_type 1 3028 -1 2078 128 0 0 chr17 34203146 34203443 -51235037 + AluSx SINE Alu 1 297 -15 909 234 47 0 chr17 34207737 34207951 -51230529 + MIR SINE MIR 14 237 -25 990 209 38 0 chr17 34211894 34212105 -51226375 + MIR SINE MIR 13 231 -31 2359 65 0 0 chr17 34213977 34214271 -51224209 + AluY SINE Alu 1 294 -17 4581 128 49 14 chr17 34214295 34215028 -51223452 + MER4E LTR ERV1 21 779 0 743 250 44 5 chr17 34215044 34215301 -51223179 + L1M4c LINE L1 1274 1646 -4736 2044 93 74 63 chr17 34215325 34215692 -51222788 - MER4B LTR ERV1 -239 371 1 958 132 38 71 chr17 34215692 34215904 -51222576 + MER39 LTR ERV1 503 707 0 1687 179 3 0 chr17 34216080 34216365 -51222115 + AluJb SINE Alu 1 286 -26 378 0 0 0 chr17 34216370 34216412 -51222068 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1617 200 138 29 chr17 34216460 34216963 -51221517 - MER39 LTR ERV1 0 707 1 631 232 7 20 chr17 34216975 34217126 -51221354 - MLT1F LTR MaLR -6 536 388 297 253 173 0 chr17 34217152 34217227 -51221253 - MLT1F LTR MaLR -281 274 187 255 219 68 0 chr17 34217310 34217383 -51221097 - MLT1F LTR MaLR -488 79 2 462 154 26 103 chr17 34217464 34217526 -51220954 + LTR16C LTR ERVL 382 432 -59 2088 121 7 0 chr17 34217526 34217823 -51220657 + AluSx SINE Alu 1 299 -13 462 154 26 103 chr17 34217823 34217877 -51220603 + LTR16C LTR ERVL 432 489 -2 377 317 139 0 chr17 34217949 34218129 -51220351 - MIR SINE MIR -3 259 55 2324 81 0 0 chr17 34218266 34218564 -51219916 - AluSx SINE Alu -14 298 1 189 147 0 0 chr17 34218879 34218913 -51219567 + (T)n Simple_repeat Simple_repeat 1 34 0 430 304 99 6 chr17 34220502 34220663 -51217817 - MIR SINE MIR -74 188 13 463 283 133 40 chr17 34221229 34221455 -51217025 - MIR SINE MIR -12 250 4 228 258 41 21 chr17 34221800 34221897 -51216583 - L1MC4a LINE L1 -1657 6151 6053 618 275 115 45 chr17 34221973 34222094 -51216386 - L1MC4a LINE L1 -1869 5939 5828 2209 60 17 33 chr17 34222094 34222394 -51216086 - AluSc SINE Alu -14 295 1 618 275 115 45 chr17 34222394 34222654 -51215826 - L1MC4a LINE L1 -1980 5828 5531 2006 112 0 3 chr17 34222663 34222994 -51215486 + AluSq SINE Alu 1 330 0 2139 102 0 3 chr17 34223013 34223307 -51215173 - AluSx SINE Alu -19 293 1 255 281 0 0 chr17 34223447 34223511 -51214969 - MIR SINE MIR -56 152 89 213 281 26 79 chr17 34224341 34224455 -51214025 + L2 LINE L2 3203 3310 -3 212 243 14 0 chr17 34224464 34224538 -51213942 + (TGGA)n Simple_repeat Simple_repeat 4 78 0 2742 19 0 0 chr17 34224832 34225144 -51213336 + AluYb8 SINE Alu 1 312 -6 251 202 48 60 chr17 34225225 34225309 -51213171 + LTR67 LTR ERVL 428 510 -47 4132 154 58 94 chr17 34225346 34226295 -51212185 + MER21A LTR ERV1 10 924 -7 1906 156 16 0 chr17 34226353 34226660 -51211820 - AluJo SINE Alu 0 312 1 572 274 14 11 chr17 34227001 34227159 -51211321 - MIR3 SINE MIR -61 147 10 423 307 59 7 chr17 34227915 34228068 -51210412 - MIR SINE MIR -21 241 81 787 106 0 2 chr17 34228074 34228320 -51210160 + AluSx SINE Alu 2 295 -14 854 181 0 0 chr17 34228333 34228466 -51210014 + AluJo SINE Alu 1 133 -169 795 198 86 0 chr17 34228507 34228669 -51209811 + AluJo SINE Alu 129 304 -8 284 136 34 0 chr17 34229280 34229339 -51209141 + G-rich Low_complexity Low_complexity 3 63 0 22 0 0 0 chr17 34230216 34230238 -51208242 + AT_rich Low_complexity Low_complexity 1 22 0 549 96 0 0 chr17 34230329 34230402 -51208078 - 7SK RNA RNA 0 193 121 3508 164 8 70 chr17 34230425 34231159 -51207321 + LTR8 LTR ERV1 1 689 -2 663 174 0 53 chr17 34231172 34231245 -51207235 - 7SK RNA RNA -68 125 61 3503 108 134 2 chr17 34231245 34231791 -51206689 + LTR35 LTR ERV1 1 618 0 663 174 0 53 chr17 34231791 34231849 -51206631 - 7SK RNA RNA -132 61 1 2041 112 0 3 chr17 34231859 34232154 -51206326 - AluSx SINE Alu -12 300 7 2342 85 0 0 chr17 34232158 34232463 -51206017 - AluSx SINE Alu -7 305 1 1929 130 16 0 chr17 34232464 34232771 -51205709 - AluJo SINE Alu 0 312 1 247 276 17 0 chr17 34232814 34232872 -51205608 - MIR3 SINE MIR -53 155 97 1616 183 59 48 chr17 34232873 34233080 -51205400 + L1MA9 LINE L1 5858 6061 -251 1437 133 94 67 chr17 34233080 34233410 -51205070 - MER44D DNA MER2_type 0 609 1 1616 183 59 48 chr17 34233410 34233443 -51205037 + L1MA9 LINE L1 6061 6092 -220 2161 85 10 13 chr17 34233443 34233748 -51204732 - AluSx SINE Alu -8 304 1 1616 183 59 48 chr17 34233748 34233900 -51204580 + L1MA9 LINE L1 6092 6255 -57 23 33 0 0 chr17 34233909 34233939 -51204541 + AT_rich Low_complexity Low_complexity 1 30 0 234 299 65 26 chr17 34233939 34234016 -51204464 - MIR SINE MIR -178 84 5 293 273 30 97 chr17 34234183 34234348 -51204132 + L2 LINE L2 3158 3311 -2 207 305 85 0 chr17 34234544 34234603 -51203877 - MIR SINE MIR 0 262 199 1513 172 19 45 chr17 34234795 34234940 -51203540 + AluJo SINE Alu 1 148 -164 2367 68 0 0 chr17 34234940 34235235 -51203245 + AluY SINE Alu 6 300 -11 1513 172 19 45 chr17 34235235 34235397 -51203083 + AluJo SINE Alu 148 300 -12 2251 81 0 0 chr17 34235836 34236134 -51202346 + AluY SINE Alu 1 298 -13 537 297 10 67 chr17 34236274 34236483 -51201997 - MIR SINE MIR 0 262 66 2163 98 24 0 chr17 34236742 34237039 -51201441 + AluSq SINE Alu 1 304 -9 2564 39 0 0 chr17 34237071 34237376 -51201104 - AluY SINE Alu -6 305 1 393 290 120 26 chr17 34237419 34237584 -51200896 + MIR SINE MIR 13 190 -60 2628 26 0 0 chr17 34237711 34238013 -51200467 - AluY SINE Alu -9 302 1 1803 107 41 4 chr17 34238062 34238358 -51200122 + AluY SINE Alu 1 306 0 739 277 11 5 chr17 34238562 34238750 -51199730 + MIR3 SINE MIR 13 201 -7 338 194 301 10 chr17 34238797 34238900 -51199580 + MIR SINE MIR 122 254 -8 288 284 22 17 chr17 34238959 34239067 -51199413 - MIR SINE MIR -49 159 54 522 246 108 69 chr17 34240319 34240379 -51198101 - MIR SINE MIR -4 258 202 2434 52 0 7 chr17 34240379 34240686 -51197794 - AluY SINE Alu -6 305 1 522 246 108 69 chr17 34240686 34240828 -51197652 - MIR SINE MIR -60 202 48 308 198 174 0 chr17 34241219 34241305 -51197175 + MIR SINE MIR 53 153 -109 2447 68 3 0 chr17 34241727 34242036 -51196444 - AluY SINE Alu -1 310 1 344 328 109 22 chr17 34242331 34242514 -51195966 - MIR SINE MIR -1 261 63 939 174 0 23 chr17 34242638 34242810 -51195670 - AluSg/x SINE Alu -8 304 137 589 243 162 14 chr17 34243800 34244010 -51194470 + MIR SINE MIR 22 262 0 271 309 0 0 chr17 34244093 34244161 -51194319 - L2 LINE L2 0 3272 3205 408 94 0 0 chr17 34244727 34244791 -51193689 + L1MB3 LINE L1 6120 6183 0 2158 99 3 7 chr17 34245129 34245432 -51193048 + AluSq SINE Alu 3 304 -9 1678 171 10 23 chr17 34245437 34245746 -51192734 + AluJb SINE Alu 1 305 -7 2311 78 7 0 chr17 34246552 34246847 -51191633 + AluY SINE Alu 1 297 -14 2205 105 0 3 chr17 34246849 34247153 -51191327 + AluSx SINE Alu 1 303 -9 237 307 27 0 chr17 34247201 34247276 -51191204 + L2 LINE L2 3189 3265 -7 2525 48 0 6 chr17 34247816 34248129 -51190351 + AluY SINE Alu 1 311 0 1332 117 0 0 chr17 34248117 34248296 -51190184 + AluSg/x SINE Alu 121 299 -13 628 229 50 22 chr17 34249069 34249248 -51189232 - MIR SINE MIR 0 262 79 2555 65 0 3 chr17 34249269 34249579 -51188901 + AluY SINE Alu 1 309 -2 805 207 113 43 chr17 34249670 34249970 -51188510 - L1MC4 LINE L1 -3 8039 7719 218 275 0 0 chr17 34249970 34250010 -51188470 - L2 LINE L2 -112 3160 3121 218 320 47 23 chr17 34250132 34250260 -51188220 - L2 LINE L2 -225 3047 2917 954 103 13 45 chr17 34250270 34250426 -51188054 + L1PA10 LINE L1 6018 6168 0 2183 111 0 0 chr17 34250534 34250814 -51187666 + AluSx SINE Alu 1 280 -32 225 94 0 0 chr17 34250815 34250847 -51187633 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 256 250 53 13 chr17 34251025 34251101 -51187379 - MIR SINE MIR -76 132 54 418 270 132 20 chr17 34251602 34251806 -51186674 + L2 LINE L2 2854 3080 -192 432 90 149 0 chr17 34251892 34251959 -51186521 + MER5A DNA MER1_type 1 77 -112 561 132 0 0 chr17 34251960 34252036 -51186444 + AluS SINE Alu 3 78 -235 1648 110 0 0 chr17 34302036 34302245 -51136235 - AluSx SINE Alu -103 209 1 229 368 0 8 chr17 34302943 34303060 -51135420 + (TATATG)n Simple_repeat Simple_repeat 1 116 0 515 302 13 0 chr17 34303102 34303261 -51135219 + MIR SINE MIR 88 248 -14 282 244 23 23 chr17 34303353 34303439 -51135041 + L1MEc LINE L1 94 179 -6217 714 263 219 51 chr17 34303440 34303832 -51134648 - MLT1G1 LTR MaLR 0 595 138 928 206 0 0 chr17 34304891 34305051 -51133429 - AluJb SINE Alu -16 296 137 832 190 101 0 chr17 34305251 34305430 -51133050 + AluJo SINE Alu 104 300 -12 1603 161 87 3 chr17 34305742 34306028 -51132452 - AluJb SINE Alu -2 310 1 855 184 6 37 chr17 34306845 34307008 -51131472 - FRAM SINE Alu -8 168 11 2372 80 3 0 chr17 34307018 34307320 -51131160 - AluY SINE Alu -8 303 1 1811 155 13 36 chr17 34307453 34307756 -51130724 + AluJo SINE Alu 2 297 -15 275 320 35 2 chr17 34308013 34308143 -51130337 + MIR SINE MIR 39 181 -27 363 340 56 25 chr17 34308161 34308496 -51129984 + L2 LINE L2 2719 3059 -213 2525 53 6 9 chr17 34308776 34309097 -51129383 + L1PA14 LINE L1 5842 6161 0 227 303 76 53 chr17 34309114 34309246 -51129234 + L2 LINE L2 3138 3272 0 677 313 66 44 chr17 34309640 34310267 -51128213 + L2 LINE L2 2353 3063 -209 388 254 204 0 chr17 34310366 34310508 -51127972 + MIR SINE MIR 42 212 -50 233 220 142 134 chr17 34313908 34313993 -51124487 + L1MEc LINE L1 617 700 -5505 2201 86 48 0 chr17 34313993 34314285 -51124195 + AluSp SINE Alu 1 306 -7 233 220 142 134 chr17 34314285 34314524 -51123956 + L1MEc LINE L1 700 935 -5270 1934 133 34 0 chr17 34314524 34314818 -51123662 + AluSx SINE Alu 1 304 -8 233 220 142 134 chr17 34314818 34315033 -51123447 + L1MEc LINE L1 935 1167 -5038 1658 185 7 14 chr17 34315033 34315314 -51123166 + AluJb SINE Alu 4 282 -30 233 220 142 134 chr17 34315314 34315467 -51123013 + L1MEc LINE L1 1167 1317 -4888 216 122 0 0 chr17 34315658 34315699 -51122781 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 634 182 0 41 chr17 34315704 34315825 -51122655 - AluJo SINE Alu -137 175 60 1770 48 0 14 chr17 34315849 34316056 -51122424 - AluY SINE Alu -18 293 90 298 162 118 15 chr17 34316586 34316654 -51121826 - L2 LINE L2 0 3313 3239 2380 79 3 10 chr17 34319235 34319538 -51118942 + AluSp SINE Alu 1 301 -12 199 283 0 17 chr17 34320327 34320387 -51118093 + L2 LINE L2 3242 3300 -13 2530 58 0 22 chr17 34320593 34320904 -51117576 + AluY SINE Alu 1 304 -7 2394 71 0 26 chr17 34322842 34323153 -51115327 + AluY SINE Alu 1 303 -8 562 182 0 0 chr17 34323467 34323555 -51114925 - AluS SINE Alu -223 89 2 440 171 0 0 chr17 34323564 34323646 -51114834 - L1MB8 LINE L1 -211 5967 5886 2178 212 29 46 chr17 34323646 34323899 -51114581 + L1MEc LINE L1 2602 2858 -3357 2224 116 10 3 chr17 34323899 34324201 -51114279 + AluSx SINE Alu 3 306 -6 2398 88 10 0 chr17 34324201 34324496 -51113984 + AluSx SINE Alu 1 299 -13 2178 212 29 46 chr17 34324496 34324855 -51113625 + L1MEc LINE L1 2856 3205 -3010 370 255 75 38 chr17 34324859 34324965 -51113515 + MIR3 SINE MIR 82 191 -17 208 337 0 10 chr17 34324976 34325077 -51113403 + (TG)n Simple_repeat Simple_repeat 2 101 0 213 254 18 0 chr17 34326038 34326053 -51112427 + GA-rich Low_complexity Low_complexity 2 15 -42 1891 149 7 16 chr17 34326053 34326362 -51112118 + AluJo SINE Alu 1 306 -6 213 254 18 0 chr17 34326362 34326401 -51112079 + GA-rich Low_complexity Low_complexity 15 57 0 1939 153 6 13 chr17 34326473 34326754 -51111726 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr17 34326754 34326781 -51111699 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1939 153 6 13 chr17 34326781 34326813 -51111667 + AluSx SINE Alu 281 312 0 331 288 40 62 chr17 34327275 34327468 -51111012 + MIR SINE MIR 39 226 -36 774 165 47 0 chr17 34327548 34327675 -51110805 - FLAM_C SINE Alu 0 133 1 2420 88 0 7 chr17 34327904 34328211 -51110269 + AluSq SINE Alu 1 305 -8 367 179 71 62 chr17 34328349 34328461 -51110019 - MIR SINE MIR -92 170 58 2331 78 0 0 chr17 34328515 34328798 -51109682 + AluY SINE Alu 1 283 -28 501 222 104 7 chr17 34328807 34328942 -51109538 - MIR3 SINE MIR -51 157 10 2132 103 0 3 chr17 34329965 34330247 -51108233 - AluSq SINE Alu -16 297 17 382 295 45 45 chr17 34330974 34331130 -51107350 - MIR SINE MIR -14 248 93 2495 69 0 7 chr17 34331136 34331442 -51107038 + AluY SINE Alu 1 304 -7 2452 84 0 13 chr17 34331907 34332218 -51106262 + AluY SINE Alu 1 307 -4 875 160 17 40 chr17 34332230 34332467 -51106013 + FAM SINE Alu 1 101 0 956 61 0 0 chr17 34332893 34333008 -51105472 - AluSq/x SINE Alu -197 115 1 247 206 69 59 chr17 34333175 34333277 -51105203 - MIR SINE MIR -70 192 90 526 250 64 27 chr17 34334496 34334684 -51103796 + MIR SINE MIR 53 247 -15 352 298 30 8 chr17 34334696 34334827 -51103653 + MIR SINE MIR 79 212 -50 259 306 32 16 chr17 34334924 34335048 -51103432 + MIR SINE MIR 81 206 -56 1098 198 0 6 chr17 34335227 34335409 -51103071 - AluJb SINE Alu -25 287 107 291 28 0 0 chr17 34335583 34335619 -51102861 + (CA)n Simple_repeat Simple_repeat 2 37 0 183 129 0 0 chr17 34335619 34335650 -51102830 + (TC)n Simple_repeat Simple_repeat 2 32 0 827 140 67 28 chr17 34335652 34335830 -51102650 - MER53 DNA DNA -1 188 4 515 167 135 0 chr17 34335940 34336036 -51102444 - FLAM_A SINE Alu -30 112 4 1069 153 6 11 chr17 34336409 34336586 -51101894 - AluJb SINE Alu 0 312 137 742 151 0 0 chr17 34336652 34336758 -51101722 + FLAM_C SINE Alu 3 108 -35 567 274 11 21 chr17 34337672 34337862 -51100618 - MIR SINE MIR -1 261 74 2106 132 0 7 chr17 34337872 34338168 -51100312 - AluSx SINE Alu -18 294 1 258 272 136 0 chr17 34338266 34338347 -51100133 + MER5A DNA MER1_type 12 103 -86 200 222 111 16 chr17 34338701 34338764 -51099716 + MIR SINE MIR 82 150 -112 345 284 90 8 chr17 34339191 34339325 -51099155 + MIR SINE MIR 20 164 -98 1042 104 0 0 chr17 34339383 34339518 -51098962 + AluSq/x SINE Alu 1 135 -177 2202 88 3 11 chr17 34339519 34339828 -51098652 + AluSp SINE Alu 1 307 0 201 214 0 0 chr17 34340479 34340521 -51097959 - L2 LINE L2 -2 3270 3229 2563 69 0 0 chr17 34340674 34340978 -51097502 + AluY SINE Alu 1 304 -7 3102 225 63 6 chr17 34340980 34341875 -51096605 + L1M4 LINE L1 2294 3239 -2907 2382 43 36 10 chr17 34342236 34342537 -51095943 + AluY SINE Alu 1 309 -2 2148 110 23 10 chr17 34342548 34342679 -51095801 + AluSx SINE Alu 1 129 -183 2166 91 39 3 chr17 34342679 34342965 -51095515 + AluSg1 SINE Alu 1 296 -13 2148 110 23 10 chr17 34342965 34343134 -51095346 + AluSx SINE Alu 129 305 -7 186 250 42 0 chr17 34343134 34343182 -51095298 - L2 LINE L2 -30 3283 3234 335 145 0 0 chr17 34343478 34343548 -51094932 + AluY SINE Alu 8 52 -250 1460 89 0 5 chr17 34343548 34343739 -51094741 + AluY SINE Alu 109 298 -13 2073 131 7 3 chr17 34343810 34344107 -51094373 + AluSq SINE Alu 1 298 -15 490 156 96 78 chr17 34344662 34344829 -51093651 - Charlie5 DNA MER1_type -27 2585 2416 1402 185 11 41 chr17 34344842 34345112 -51093368 + AluJo SINE Alu 5 266 -46 21 0 0 0 chr17 34345161 34345182 -51093298 + AT_rich Low_complexity Low_complexity 1 21 0 805 166 0 10 chr17 34345183 34345334 -51093146 - MER33 DNA MER1_type -259 65 1 38 0 0 0 chr17 34345692 34345730 -51092750 + AT_rich Low_complexity Low_complexity 1 38 0 2543 69 3 0 chr17 34345738 34346043 -51092437 + AluY SINE Alu 1 306 -5 2325 100 0 3 chr17 34346244 34346544 -51091936 + AluSq SINE Alu 1 299 -14 759 181 0 0 chr17 34346555 34346688 -51091792 + FLAM_A SINE Alu 1 133 0 394 253 192 7 chr17 34347132 34347278 -51091202 - MER5A DNA MER1_type -7 182 10 2536 47 0 17 chr17 34347507 34347808 -51090672 + AluY SINE Alu 1 296 -15 2433 67 13 0 chr17 34348187 34348486 -51089994 + AluY SINE Alu 1 303 -8 2085 150 0 0 chr17 34349264 34349558 -51088922 + AluSx SINE Alu 3 296 -16 219 69 0 0 chr17 34350467 34350496 -51087984 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr17 34350786 34350814 -51087666 + AT_rich Low_complexity Low_complexity 1 28 0 2221 113 6 0 chr17 34351120 34351431 -51087049 - AluSq SINE Alu 0 313 1 2198 86 14 17 chr17 34353172 34353464 -51085016 - AluSc SINE Alu -18 291 1 1641 165 10 34 chr17 34353553 34353844 -51084636 - AluJo SINE Alu -28 284 1 1812 122 23 8 chr17 34354059 34354322 -51084158 + AluJo SINE Alu 26 292 -20 710 151 0 55 chr17 34354943 34355089 -51083391 - L1PB4 LINE L1 -1 6155 6018 1531 171 13 62 chr17 34355112 34355421 -51083059 + AluJb SINE Alu 1 294 -18 1156 168 53 14 chr17 34356224 34356432 -51082048 - AluJb SINE Alu -95 217 2 1619 219 0 0 chr17 34356432 34356733 -51081747 - AluJo SINE Alu -11 301 1 469 153 10 71 chr17 34356760 34356858 -51081622 - FLAM_A SINE Alu -46 96 5 2208 124 7 0 chr17 34357456 34357763 -51080717 - AluSg SINE Alu 0 310 2 2202 95 3 3 chr17 34357844 34358159 -51080321 - AluSp SINE Alu 0 315 1 1328 164 13 25 chr17 34358318 34358556 -51079924 + MER46A DNA MER2_type 2 236 0 352 390 0 0 chr17 34359268 34359445 -51079035 + (CGG)n Simple_repeat Simple_repeat 2 178 0 281 333 0 0 chr17 34359434 34359608 -51078872 + GA-rich Low_complexity Low_complexity 2 175 0 * 27 73 0 0 chr17 34359947 34360002 -51078478 + AT_rich Low_complexity Low_complexity 1 55 0 1843 171 0 4 chr17 34360008 34360288 -51078192 - AluJo SINE Alu -30 282 4 1694 63 113 0 chr17 34360300 34360522 -51077958 - AluY SINE Alu -64 247 1 739 230 126 4 chr17 34360879 34361109 -51077371 + MIR SINE MIR 3 260 -2 386 232 169 28 chr17 34361125 34361302 -51077178 - MIR SINE MIR -5 257 56 188 154 77 0 chr17 34362138 34362177 -51076303 - MER5A DNA MER1_type -26 163 122 211 305 168 32 chr17 34362974 34363259 -51075221 - L2 LINE L2 -686 2628 2305 610 275 118 17 chr17 34363335 34363622 -51074858 + L2 LINE L2 2092 2407 -907 203 129 0 113 chr17 34363631 34363651 -51074829 - MER5B DNA MER1_type -98 80 59 2050 120 27 3 chr17 34363651 34363943 -51074537 - AluSg SINE Alu -9 301 3 203 129 0 113 chr17 34363943 34363984 -51074496 - MER5B DNA MER1_type -119 59 26 214 271 119 92 chr17 34363996 34364244 -51074236 - L2 LINE L2 -1147 2167 1927 1020 154 109 20 chr17 34364244 34364445 -51074035 - MER20 DNA MER1_type 0 219 1 214 271 119 92 chr17 34364445 34364683 -51073797 - L2 LINE L2 -1387 1927 1668 695 143 22 201 chr17 34364815 34365129 -51073351 - MIR SINE MIR 0 262 5 2474 77 3 3 chr17 34365254 34365564 -51072916 - AluY SINE Alu -1 310 1 1397 146 0 14 chr17 34365676 34365915 -51072565 + AluSg/x SINE Alu 73 308 0 540 188 0 0 chr17 34365920 34366016 -51072464 + MER5A DNA MER1_type 62 157 -32 417 157 0 24 chr17 34366016 34366113 -51072367 - FLAM SINE Alu -25 108 44 218 222 143 0 chr17 34366117 34366180 -51072300 + L2 LINE L2 3242 3313 0 2129 108 19 38 chr17 34366226 34366396 -51072084 - AluSx SINE Alu -3 309 146 2216 76 22 51 chr17 34366396 34366711 -51071769 - AluY SINE Alu -5 306 1 2129 108 19 38 chr17 34366711 34366855 -51071625 - AluSx SINE Alu -166 146 1 206 284 95 0 chr17 34367045 34367119 -51071361 + MIR SINE MIR 44 124 -84 562 159 290 7 chr17 34367273 34367411 -51071069 + MER53 DNA DNA 1 177 -12 397 167 204 19 chr17 34367738 34367846 -51070634 + L2 LINE L2 3180 3307 -6 370 240 47 80 chr17 34368011 34368161 -51070319 - MIR SINE MIR -70 192 48 296 127 18 0 chr17 34368593 34368648 -51069832 + (CTCGG)n Simple_repeat Simple_repeat 3 58 0 364 324 79 9 chr17 34369780 34369973 -51068507 - MIR SINE MIR -55 207 5 328 224 174 10 chr17 34369994 34370092 -51068388 + MIR3 SINE MIR 93 206 -2 524 154 13 0 chr17 34370927 34371005 -51067475 + Tigger5 DNA MER2_type 1 79 -2244 291 257 0 0 chr17 34371086 34371156 -51067324 + MIR SINE MIR 155 224 -38 1313 217 39 64 chr17 34371335 34371507 -51066973 - L2 LINE L2 0 3313 3138 1875 114 28 74 chr17 34371507 34371832 -51066648 + AluSq SINE Alu 1 310 -3 1313 217 39 64 chr17 34371832 34372097 -51066383 - L2 LINE L2 -175 3138 2887 2133 82 41 27 chr17 34372620 34372912 -51065568 - AluY SINE Alu -15 296 1 2562 239 168 18 chr17 34372928 34373899 -51064581 - L2 LINE L2 -1712 1602 486 2613 50 0 0 chr17 34375250 34375549 -51062931 - AluY SINE Alu -12 299 1 225 303 204 8 chr17 34375580 34375712 -51062768 + L2 LINE L2 2702 2859 -455 243 177 0 97 chr17 34375721 34375783 -51062697 - MER94 DNA DNA -12 122 67 643 283 66 35 chr17 34375862 34376120 -51062360 + L2 LINE L2 2915 3180 -92 366 228 91 121 chr17 34378640 34378696 -51059784 + MIR SINE MIR 20 76 -186 2612 48 0 0 chr17 34378696 34378990 -51059490 - AluY SINE Alu -17 294 1 366 228 91 121 chr17 34378990 34379165 -51059315 + MIR SINE MIR 76 244 -18 1267 143 72 14 chr17 34379399 34379622 -51058858 + MER46A DNA MER2_type 1 236 0 2080 131 10 10 chr17 34380583 34380895 -51057585 + AluSx SINE Alu 1 312 0 1983 146 33 0 chr17 34380899 34381200 -51057280 + AluSq SINE Alu 2 312 -1 218 281 229 15 chr17 34381328 34381738 -51056742 + L2 LINE L2 711 1208 -2106 2116 120 7 0 chr17 34381951 34382242 -51056238 + AluSx SINE Alu 5 297 -15 2184 83 7 4 chr17 34382249 34382565 -51055915 + AluSc SINE Alu 1 317 0 2195 89 13 40 chr17 34382748 34383051 -51055429 + AluSq SINE Alu 1 295 -18 374 245 50 29 chr17 34383168 34383307 -51055173 + MER5B DNA MER1_type 2 143 -35 395 235 30 3 chr17 34383653 34383820 -51054660 + MIR SINE MIR 11 232 -30 2042 123 0 63 chr17 34383858 34384176 -51054304 + AluSx SINE Alu 1 298 -14 2488 80 0 0 chr17 34384648 34384949 -51053531 - AluSg SINE Alu -9 301 1 346 194 36 108 chr17 34385791 34385861 -51052619 + L2 LINE L2 2282 2339 -975 5188 90 4 23 chr17 34385861 34386417 -51052063 - L1PA13 LINE L1 -11 6152 5612 2537 41 24 0 chr17 34386417 34386709 -51051771 - AluY SINE Alu -12 299 1 5188 90 4 23 chr17 34386709 34386888 -51051592 - L1PA13 LINE L1 -551 5612 5431 346 194 36 108 chr17 34386888 34386956 -51051524 + L2 LINE L2 2339 2410 -904 1082 250 69 69 chr17 34386976 34387697 -51050783 + L2 LINE L2 2587 3292 -21 1424 160 13 75 chr17 34387778 34388084 -51050396 + AluJo SINE Alu 1 287 -25 599 201 94 7 chr17 34388438 34388587 -51049893 - MER112 DNA MER1_type -96 164 3 1611 153 3 103 chr17 34389575 34389916 -51048564 - AluJo SINE Alu -3 309 3 1530 171 17 35 chr17 34391086 34391373 -51047107 + AluJb SINE Alu 1 282 -30 201 39 0 0 chr17 34391376 34391402 -51047078 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2223 92 11 0 chr17 34391736 34392018 -51046462 - AluSx SINE Alu -26 286 2 520 255 24 53 chr17 34392744 34392952 -51045528 - L2 LINE L2 0 3313 3112 1750 111 96 11 chr17 34393009 34393289 -51045191 + AluSx SINE Alu 1 304 -8 493 130 90 0 chr17 34393289 34393404 -51045076 - L1MA4 LINE L1 -235 6065 5939 405 308 75 54 chr17 34393404 34393655 -51044825 - L2 LINE L2 -292 3021 2771 2138 127 0 22 chr17 34394790 34395106 -51043374 - AluSx SINE Alu -3 309 1 1695 165 0 54 chr17 34395139 34395455 -51043025 + AluJo SINE Alu 1 299 -13 1917 129 0 21 chr17 34396383 34396662 -51041818 + AluSq SINE Alu 6 278 -35 200 298 107 60 chr17 34396739 34396907 -51041573 + L3 LINE CR1 1391 1566 -11 290 326 58 47 chr17 34398818 34398990 -51039490 + HAL1 LINE L1 1 174 -2333 673 232 167 66 chr17 34399000 34399396 -51039084 + HAL1 LINE L1 256 691 -1816 * 1128 235 47 10 chr17 34399394 34399823 -51038657 + L1M4b LINE L1 1608 2191 -4947 * 1188 165 102 78 chr17 34399815 34399847 -51038633 + L1MC5 LINE L1 7476 7506 -489 805 196 130 5 chr17 34399847 34400031 -51038449 + MER3 DNA MER1_type 3 209 0 1188 165 102 78 chr17 34400031 34400237 -51038243 + L1MC5 LINE L1 7506 7706 -289 2011 105 61 0 chr17 34400237 34400514 -51037966 + AluSx SINE Alu 1 294 -18 1188 165 102 78 chr17 34400514 34400712 -51037768 + L1MC5 LINE L1 7706 7984 -11 1926 156 0 23 chr17 34400713 34401015 -51037465 - AluSx SINE Alu -14 298 4 1007 224 102 9 chr17 34401034 34401369 -51037111 + HAL1 LINE L1 1140 1505 -1002 649 222 77 73 chr17 34401387 34401648 -51036832 + HAL1 LINE L1 1609 1870 -637 258 237 49 112 chr17 34401747 34401849 -51036631 + HAL1 LINE L1 2043 2125 -382 1847 164 3 20 chr17 34401849 34402147 -51036333 + AluJo SINE Alu 1 293 -19 258 237 49 112 chr17 34402147 34402268 -51036212 + HAL1 LINE L1 2125 2252 -255 1802 157 23 26 chr17 34402280 34402585 -51035895 + AluJo SINE Alu 1 304 -8 2435 54 0 41 chr17 34402702 34403017 -51035463 - AluY SINE Alu -9 302 1 2230 107 3 3 chr17 34403637 34403937 -51034543 + AluSq SINE Alu 1 300 -13 759 284 81 49 chr17 34405378 34405948 -51032532 - L1MEd LINE L1 -5281 838 251 2120 117 0 0 chr17 34406522 34406829 -51031651 + AluSx SINE Alu 1 307 0 2573 74 0 3 chr17 34407056 34407365 -51031115 + AluSq SINE Alu 1 308 -5 1604 198 0 18 chr17 34407425 34407708 -51030772 - AluSx SINE Alu -15 297 20 1310 206 29 39 chr17 34407997 34408308 -51030172 + AluJo SINE Alu 1 308 -4 2034 130 23 10 chr17 34408705 34409013 -51029467 + AluSx SINE Alu 1 312 0 1475 140 34 93 chr17 34409024 34409346 -51029134 + AluJb SINE Alu 1 303 -9 1969 73 91 22 chr17 34409497 34409772 -51028708 + AluSq SINE Alu 6 299 -14 198 0 0 0 chr17 34410718 34410740 -51027740 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3504 204 74 11 chr17 34410915 34411540 -51026940 + L1ME1 LINE L1 3713 4422 -1724 2092 134 0 3 chr17 34411540 34411839 -51026641 + AluSq SINE Alu 2 299 -14 3504 204 74 11 chr17 34411839 34412186 -51026294 + L1ME1 LINE L1 4422 4746 -1400 1158 217 115 38 chr17 34412204 34412410 -51026070 + L1ME1 LINE L1 4957 5146 -1020 1693 214 0 0 chr17 34412410 34412713 -51025767 + AluJo SINE Alu 1 303 -9 1158 217 115 38 chr17 34412713 34413373 -51025107 + L1ME1 LINE L1 5146 5960 -206 629 153 33 159 chr17 34413568 34413869 -51024611 + L1MC5 LINE L1 7403 7665 -296 301 290 75 11 chr17 34413870 34413963 -51024517 + HAL1b LINE L1 93 191 -1157 569 99 0 59 chr17 34413978 34414079 -51024401 + AluSg/x SINE Alu 214 308 -2 458 246 90 8 chr17 34414664 34414786 -51023694 + L2 LINE L2 3182 3313 0 2070 126 3 7 chr17 34414985 34415278 -51023202 - AluSx SINE Alu -20 292 1 22 0 0 0 chr17 34415748 34415770 -51022710 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr17 34416183 34416213 -51022267 + AT_rich Low_complexity Low_complexity 1 30 0 2009 75 93 11 chr17 34416213 34416492 -51021988 + AluY SINE Alu 1 302 -9 313 224 0 0 chr17 34416612 34416679 -51021801 + L1ME LINE L1 5732 5798 -323 2243 110 7 0 chr17 34420258 34420557 -51017923 + AluSq SINE Alu 1 301 -12 752 97 81 135 chr17 34421178 34421363 -51017117 - MER5B DNA MER1_type -3 175 1 2315 102 3 0 chr17 34421463 34421766 -51016714 + AluSx SINE Alu 1 304 -8 580 184 0 10 chr17 34422748 34422846 -51015634 - AluJ/FLAM SINE Alu -215 97 1 1680 191 7 3 chr17 34424274 34424573 -51013907 + AluJb SINE Alu 1 300 -12 372 242 81 60 chr17 34424914 34425063 -51013417 + L2 LINE L2 3162 3313 0 1114 161 6 0 chr17 34425279 34425447 -51013033 + FRAM SINE Alu 1 165 -11 547 200 122 9 chr17 34425640 34425755 -51012725 + FLAM_C SINE Alu 1 128 -5 374 251 274 22 chr17 34426202 34426381 -51012099 + MIR SINE MIR 6 229 -33 21 0 0 0 chr17 34427146 34427167 -51011313 + AT_rich Low_complexity Low_complexity 1 21 0 349 62 234 0 chr17 34427756 34427820 -51010660 + MADE1 DNA Mariner 2 80 0 356 248 10 30 chr17 34428332 34428433 -51010047 - MER5B DNA MER1_type -5 173 75 2323 99 3 3 chr17 34428916 34429229 -51009251 + AluSq SINE Alu 1 313 0 442 178 71 0 chr17 34429316 34429413 -51009067 + MER5A DNA MER1_type 4 100 -78 685 188 0 16 chr17 34429423 34429551 -51008929 + FLAM_C SINE Alu 7 132 -11 204 125 0 0 chr17 34431404 34431436 -51007044 + (A)n Simple_repeat Simple_repeat 1 32 0 2328 45 42 7 chr17 34432799 34433086 -51005394 - AluY SINE Alu -14 297 1 2741 214 90 12 chr17 34433351 34434465 -51004015 + L1ME3 LINE L1 4886 6106 -56 422 192 50 0 chr17 34434881 34434980 -51003500 + L1M4 LINE L1 3492 3595 -2551 533 243 80 42 chr17 34435033 34435321 -51003159 + L1MC5 LINE L1 7631 7929 -32 1974 146 0 7 chr17 34435339 34435641 -51002839 + AluSx SINE Alu 4 303 -9 1979 150 0 7 chr17 34435924 34436247 -51002233 + AluSx SINE Alu 1 321 0 242 316 105 38 chr17 34436365 34436498 -51001982 + MIR SINE MIR 50 191 -71 1646 150 0 93 chr17 34439317 34439450 -50999030 + AluJb SINE Alu 13 102 -210 2296 115 0 0 chr17 34439450 34439755 -50998725 + AluSx SINE Alu 1 305 -7 1646 150 0 93 chr17 34439755 34439934 -50998546 + AluJb SINE Alu 102 296 -16 2061 128 0 3 chr17 34440130 34440426 -50998054 + AluSq SINE Alu 1 295 -18 344 228 139 0 chr17 34440505 34440606 -50997874 - L2 LINE L2 -1 3271 3157 279 0 0 0 chr17 34440925 34440956 -50997524 + (CA)n Simple_repeat Simple_repeat 1 31 0 2117 139 3 0 chr17 34441120 34441137 -50997343 - AluSx SINE Alu -9 303 288 384 22 0 0 chr17 34441137 34441182 -50997298 + (TATG)n Simple_repeat Simple_repeat 2 46 0 2117 139 3 0 chr17 34441182 34441466 -50997014 - AluSx SINE Alu -24 288 1 1139 156 0 0 chr17 34441645 34441812 -50996668 + AluSg/x SINE Alu 138 304 -8 198 103 0 0 chr17 34442170 34442199 -50996281 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 1924 148 17 10 chr17 34442816 34443113 -50995367 + AluSx SINE Alu 1 299 -13 473 320 0 47 chr17 34443576 34443748 -50994732 - MER5A DNA MER1_type 0 189 26 2232 99 3 0 chr17 34443824 34444132 -50994348 - AluSp SINE Alu 0 309 1 225 36 0 0 chr17 34444467 34444495 -50993985 + U6 snRNA snRNA 1 28 -79 2057 153 7 0 chr17 34444640 34444947 -50993533 - AluJb SINE Alu -2 310 2 2044 125 0 24 chr17 34445015 34445311 -50993169 + AluSx SINE Alu 1 289 -23 415 240 273 26 chr17 34445474 34445628 -50992852 + MIR SINE MIR 3 194 -68 244 178 0 0 chr17 34446378 34446423 -50992057 + MER97c DNA MER1_type? 535 579 -511 1124 65 59 24 chr17 34446451 34446621 -50991859 - MER30 DNA MER1_type -54 176 1 1576 176 40 18 chr17 34448102 34448409 -50990071 - AluJo SINE Alu 0 313 1 866 213 11 5 chr17 34448931 34449119 -50989361 + MER5A DNA MER1_type 1 189 0 2269 116 7 3 chr17 34449162 34449472 -50989008 + AluSq SINE Alu 1 311 -2 2281 117 0 0 chr17 34449483 34449783 -50988697 + AluSx SINE Alu 1 300 -12 1681 159 3 43 chr17 34450339 34450641 -50987839 - AluJo SINE Alu -11 301 12 2513 59 0 3 chr17 34450888 34451193 -50987287 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 34451264 34451285 -50987195 + AT_rich Low_complexity Low_complexity 1 21 0 731 196 0 0 chr17 34451561 34451694 -50986786 + FLAM_A SINE Alu 1 133 0 2206 102 10 3 chr17 34451714 34452009 -50986471 + AluSx SINE Alu 1 297 -15 2139 103 25 0 chr17 34452220 34452501 -50985979 + AluSx SINE Alu 1 288 -24 1940 153 27 0 chr17 34453711 34454012 -50984468 + AluSq SINE Alu 1 309 -4 1997 122 0 21 chr17 34454012 34454333 -50984147 + AluSg1 SINE Alu 1 315 0 2040 104 0 11 chr17 34454345 34454623 -50983857 + AluSx SINE Alu 1 275 -37 732 264 101 44 chr17 34455260 34455552 -50982928 + L1MC5 LINE L1 7246 7520 -441 2270 88 0 0 chr17 34455552 34455835 -50982645 - AluSx SINE Alu -29 283 1 732 264 101 44 chr17 34455835 34456193 -50982287 + L1MC5 LINE L1 7520 7917 -44 2122 107 7 0 chr17 34456328 34456619 -50981861 - AluSc SINE Alu -16 293 1 35 54 0 0 chr17 34456734 34456790 -50981690 + AT_rich Low_complexity Low_complexity 1 56 0 197 318 0 0 chr17 34456851 34456895 -50981585 + L2 LINE L2 3210 3253 -19 2171 117 0 3 chr17 34457265 34457548 -50980932 + AluSx SINE Alu 1 282 -30 354 288 180 44 chr17 34457596 34457912 -50980568 + L1M4 LINE L1 5039 5397 -749 192 265 88 15 chr17 34459424 34459492 -50978988 - MIR SINE MIR -184 78 6 376 294 114 67 chr17 34459919 34460262 -50978218 + HAL1 LINE L1 712 1070 -1437 * 390 253 224 47 chr17 34460245 34460452 -50978028 + HAL1 LINE L1 1816 2086 -421 2104 123 16 29 chr17 34460452 34460768 -50977712 + AluSx SINE Alu 1 312 0 390 253 224 47 chr17 34460768 34460837 -50977643 + HAL1 LINE L1 2086 2141 -366 1750 168 0 55 chr17 34461071 34461380 -50977100 - AluJb SINE Alu -20 292 1 1891 146 43 9 chr17 34461408 34461737 -50976743 + MER2 DNA MER2_type 1 340 -5 335 279 91 78 chr17 34461744 34461898 -50976582 + HAL1 LINE L1 2352 2507 0 216 0 0 0 chr17 34462430 34462454 -50976026 + (A)n Simple_repeat Simple_repeat 1 24 0 903 195 34 136 chr17 34463843 34464197 -50974283 + L2 LINE L2 2996 3313 0 213 186 23 0 chr17 34464459 34464502 -50973978 + L2 LINE L2 3254 3297 -16 293 317 87 44 chr17 34465760 34465943 -50972537 + MIR SINE MIR 34 224 -38 751 188 41 0 chr17 34465973 34466143 -50972337 + MER104 DNA MER2_type 1 177 -3 1765 131 0 0 chr17 34466182 34466418 -50972062 - AluSx SINE Alu -76 236 1 2353 87 3 3 chr17 34466735 34467034 -50971446 + AluSx SINE Alu 1 299 -13 1725 173 3 24 chr17 34468872 34469167 -50969313 - AluJo SINE Alu -23 289 1 376 193 14 25 chr17 34469250 34469329 -50969151 - AluJo SINE Alu -20 282 211 992 142 25 12 chr17 34469329 34469491 -50968989 - AluJo SINE Alu -138 174 11 2070 145 0 16 chr17 34469614 34469931 -50968549 + AluSx SINE Alu 1 312 0 815 162 0 22 chr17 34470203 34470339 -50968141 - FLAM_C SINE Alu 0 133 1 504 258 31 43 chr17 34470454 34470617 -50967863 - MIR SINE MIR -75 187 27 24 53 0 0 chr17 34472225 34472263 -50966217 + AT_rich Low_complexity Low_complexity 1 38 0 2093 133 0 20 chr17 34472341 34472641 -50965839 + AluSx SINE Alu 2 295 -17 621 321 89 9 chr17 34472657 34472881 -50965599 - MIR SINE MIR -15 247 6 380 185 50 6 chr17 34472980 34473232 -50965248 + L1MD2 LINE L1 6164 6403 -1569 2568 48 0 13 chr17 34473232 34473547 -50964933 + AluY SINE Alu 1 311 0 23 92 0 0 chr17 34473987 34474052 -50964428 + AT_rich Low_complexity Low_complexity 1 65 0 643 294 50 14 chr17 34474342 34474563 -50963917 - MIR SINE MIR -14 248 20 1226 165 9 14 chr17 34474572 34474790 -50963690 - MER20 DNA MER1_type 0 219 3 225 0 0 0 chr17 34475019 34475044 -50963436 + (T)n Simple_repeat Simple_repeat 1 25 0 1556 181 49 21 chr17 34475210 34475498 -50962982 + AluJo SINE Alu 1 296 -16 23 0 0 0 chr17 34475499 34475522 -50962958 + AT_rich Low_complexity Low_complexity 1 23 0 311 315 125 5 chr17 34475980 34476164 -50962316 - MIR SINE MIR 0 262 57 186 171 0 0 chr17 34476667 34476708 -50961772 + T-rich Low_complexity Low_complexity 1 41 0 252 0 0 0 chr17 34476791 34476819 -50961661 + (TG)n Simple_repeat Simple_repeat 1 28 0 492 110 0 0 chr17 34476837 34476910 -50961570 - AluS SINE Alu -240 73 1 389 325 79 31 chr17 34476941 34477169 -50961311 + MIR SINE MIR 14 252 -10 598 212 88 7 chr17 34477356 34477493 -50960987 + MER96 DNA MER1_type? 1 148 -27 1654 183 0 50 chr17 34478606 34478775 -50959705 - AluJo SINE Alu -11 301 154 2382 80 0 3 chr17 34478775 34479074 -50959406 - AluY SINE Alu -13 298 1 1654 183 0 50 chr17 34479074 34479221 -50959259 - AluJo SINE Alu -158 154 1 2182 120 3 10 chr17 34479253 34479562 -50958918 + AluSx SINE Alu 1 307 -5 1415 176 34 0 chr17 34479959 34480053 -50958427 + AluJo SINE Alu 35 124 -188 2342 91 0 3 chr17 34480053 34480351 -50958129 + AluY SINE Alu 1 297 -14 1415 176 34 0 chr17 34480351 34480495 -50957985 + AluJo SINE Alu 124 281 -31 192 77 0 0 chr17 34480500 34480526 -50957954 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr17 34480993 34481021 -50957459 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr17 34481905 34481925 -50956555 + (A)n Simple_repeat Simple_repeat 1 20 0 2302 101 3 0 chr17 34482495 34482793 -50955687 + AluSq SINE Alu 1 299 -14 439 247 59 62 chr17 34482846 34483150 -50955330 + L1MC5 LINE L1 7623 7925 -36 2155 132 0 0 chr17 34483161 34483457 -50955023 + AluSx SINE Alu 2 297 -15 2421 92 0 13 chr17 34484150 34484490 -50953990 + AluSp SINE Alu 1 336 0 1446 174 80 28 chr17 34484495 34484782 -50953698 + AluJo SINE Alu 1 302 -10 241 162 0 0 chr17 34484854 34484891 -50953589 - Alu SINE Alu -265 38 2 2122 124 0 0 chr17 34484928 34485218 -50953262 - AluSx SINE Alu -16 296 7 1848 166 0 3 chr17 34485291 34485592 -50952888 + AluJb SINE Alu 1 300 -12 28 0 0 0 chr17 34485596 34485624 -50952856 + AT_rich Low_complexity Low_complexity 1 28 0 585 191 73 59 chr17 34485935 34486139 -50952341 - L1MC5 LINE L1 -1045 6916 6710 1764 149 29 0 chr17 34486925 34487240 -50951240 + MER33 DNA MER1_type 1 324 0 1769 83 4 0 chr17 34487693 34487921 -50950559 + AluSp SINE Alu 71 299 -14 374 247 12 12 chr17 34488022 34488107 -50950373 + MER58D DNA MER1_type 9 93 -293 1024 155 0 11 chr17 34488131 34488376 -50950104 + AluSx SINE Alu 1 304 -6 1003 148 56 84 chr17 34488379 34488663 -50949817 + MER58D DNA MER1_type 110 385 -1 5139 156 90 74 chr17 34488835 34489318 -50949162 - Charlie1a DNA MER1_type -1307 1454 980 2218 120 0 7 chr17 34489318 34489627 -50948853 + AluSx SINE Alu 3 309 -3 5139 156 90 74 chr17 34489627 34489764 -50948716 - Charlie1a DNA MER1_type -1781 980 847 2162 127 0 19 chr17 34489764 34490078 -50948402 - AluSx SINE Alu -4 308 1 5139 156 90 74 chr17 34490078 34490864 -50947616 - Charlie1a DNA MER1_type -1914 847 24 23 54 0 0 chr17 34491571 34491608 -50946872 + AT_rich Low_complexity Low_complexity 1 37 0 245 231 92 0 chr17 34491886 34491951 -50946529 - MIR SINE MIR -101 107 37 530 314 35 6 chr17 34491958 34492130 -50946350 + MER5B DNA MER1_type 1 177 -1 315 282 64 124 chr17 34492598 34493112 -50945368 - L1M2 LINE L1 -5472 1377 895 662 213 21 85 chr17 34494085 34494130 -50944350 + MER5B DNA MER1_type 1 47 -131 1954 162 0 16 chr17 34494130 34494438 -50944042 - AluJb SINE Alu -9 303 1 662 213 21 85 chr17 34494438 34494580 -50943900 + MER5B DNA MER1_type 47 176 -2 1660 93 31 4 chr17 34496255 34496513 -50941967 - L1MA3 LINE L1 0 6305 6041 2085 114 7 0 chr17 34496862 34497163 -50941317 + AluSx SINE Alu 1 303 0 918 176 26 0 chr17 34497188 34497341 -50941139 + FRAM SINE Alu 3 159 -17 26 30 0 0 chr17 34497341 34497374 -50941106 + AT_rich Low_complexity Low_complexity 1 33 0 1196 129 0 0 chr17 34498230 34498401 -50940079 + AluJo SINE Alu 1 171 -141 523 200 0 0 chr17 34498403 34498498 -50939982 - AluSp SINE Alu -82 231 137 1947 138 14 0 chr17 34498506 34498795 -50939685 - AluSq SINE Alu -5 308 16 417 222 9 0 chr17 34499224 34499332 -50939148 + L1MB7 LINE L1 6060 6168 -16 2491 44 24 0 chr17 34499485 34499781 -50938699 + AluY SINE Alu 1 303 -8 1672 86 0 9 chr17 34500924 34501144 -50937336 + AluSq SINE Alu 88 305 -8 406 179 71 62 chr17 34501282 34501394 -50937086 - MIR SINE MIR -92 170 58 2289 78 0 0 chr17 34501448 34501731 -50936749 + AluY SINE Alu 1 283 -28 548 222 104 7 chr17 34501740 34501875 -50936605 - MIR3 SINE MIR -51 157 10 2068 103 0 3 chr17 34502898 34503180 -50935300 - AluSq SINE Alu -16 297 17 456 276 55 70 chr17 34503907 34504069 -50934411 - MIR SINE MIR -14 248 88 2413 78 0 0 chr17 34504069 34504378 -50934102 + AluY SINE Alu 1 309 -2 456 276 55 70 chr17 34504378 34504414 -50934066 - MIR SINE MIR -174 88 53 2365 84 0 13 chr17 34504840 34505151 -50933329 + AluY SINE Alu 1 307 -4 918 160 17 40 chr17 34505163 34505400 -50933080 + FAM SINE Alu 1 101 0 355 255 310 11 chr17 34505714 34505985 -50932495 + L2 LINE L2 2157 2508 -806 535 308 58 22 chr17 34506034 34506258 -50932222 + L2 LINE L2 2828 3059 -213 2214 120 0 0 chr17 34506331 34506640 -50931840 - AluSx SINE Alu -1 311 3 2134 99 7 3 chr17 34506827 34507145 -50931335 + AluSq SINE Alu 1 319 0 622 238 149 47 chr17 34507329 34507543 -50930937 - MIR SINE MIR -1 261 26 403 270 92 13 chr17 34507592 34507744 -50930736 - MIR SINE MIR -94 168 5 1660 128 8 0 chr17 34508714 34508963 -50929517 - L1MB7 LINE L1 -9 6175 5925 1880 108 74 0 chr17 34509159 34509428 -50929052 - AluSg SINE Alu -21 289 1 344 263 161 8 chr17 34509945 34510063 -50928417 + MIR3 SINE MIR 10 145 -63 1986 144 6 13 chr17 34510278 34510590 -50927890 - AluSx SINE Alu -2 310 1 437 90 0 0 chr17 34510626 34510693 -50927787 - MER53 DNA DNA -2 187 121 2208 99 0 13 chr17 34510719 34511021 -50927459 + AluSx SINE Alu 1 298 -14 2348 70 0 3 chr17 34511023 34511321 -50927159 + AluY SINE Alu 3 299 -12 425 307 137 10 chr17 34511454 34511659 -50926821 - MIR SINE MIR -11 251 21 188 291 0 97 chr17 34512722 34512825 -50925655 + MIR SINE MIR 42 134 -74 220 271 73 62 chr17 34514092 34514188 -50924292 + MIR SINE MIR 71 167 -95 420 104 0 0 chr17 34515438 34515505 -50922975 + (TA)n Simple_repeat Simple_repeat 2 68 0 30 0 0 0 chr17 34515520 34515550 -50922930 + AT_rich Low_complexity Low_complexity 1 30 0 302 193 110 18 chr17 34515550 34515659 -50922821 - L1ME3A LINE L1 -6 6164 6046 2469 69 3 0 chr17 34515725 34516029 -50922451 - AluY SINE Alu -6 305 1 584 265 28 62 chr17 34516033 34516085 -50922395 - MIR SINE MIR -10 252 200 1788 151 0 10 chr17 34516085 34516412 -50922068 - AluJo SINE Alu 0 312 1 584 265 28 62 chr17 34516412 34516426 -50922054 - MIR SINE MIR -62 200 187 288 77 0 0 chr17 34516426 34516465 -50922015 + (CA)n Simple_repeat Simple_repeat 2 40 0 584 265 28 62 chr17 34516465 34516608 -50921872 - MIR SINE MIR -75 187 49 363 242 77 65 chr17 34517683 34517841 -50920639 + MIR SINE MIR 21 179 -63 505 227 258 0 chr17 34517893 34518056 -50920424 - MIR SINE MIR -2 260 56 2105 128 7 0 chr17 34518352 34518650 -50919830 - AluSx SINE Alu -12 300 1 235 220 0 0 chr17 34519443 34519493 -50918987 - MIR SINE MIR -72 136 87 183 80 0 0 chr17 34519888 34519913 -50918567 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 341 310 71 0 chr17 34519918 34520031 -50918449 - L2 LINE L2 -22 3291 3171 228 226 0 0 chr17 34523073 34523126 -50915354 + CT-rich Low_complexity Low_complexity 2 54 0 2057 117 0 0 chr17 34523241 34523565 -50914915 - AluSx SINE Alu 0 324 1 1460 194 7 36 chr17 34523596 34523900 -50914580 + AluJb SINE Alu 3 297 -15 750 144 0 50 chr17 34523900 34524028 -50914452 - FLAM_C SINE Alu -178 124 2 2406 54 10 0 chr17 34524040 34524336 -50914144 - AluY SINE Alu -12 299 1 257 325 12 0 chr17 34524602 34524685 -50913795 - MER91A DNA MER1_type -110 86 3 2305 100 3 0 chr17 34524890 34525201 -50913279 + AluSp SINE Alu 1 312 -1 248 328 255 12 chr17 34525331 34525578 -50912902 - L2 LINE L2 -451 2863 2557 968 181 12 0 chr17 34525601 34525767 -50912713 + AluJb SINE Alu 136 303 -9 2199 106 0 22 chr17 34525769 34526080 -50912400 + AluSx SINE Alu 1 304 -8 373 269 43 57 chr17 34526476 34526617 -50911863 + MIR SINE MIR 21 159 -103 1741 247 108 11 chr17 34527187 34527483 -50910997 - LTR40a LTR ERVL 0 519 158 2003 108 7 0 chr17 34527483 34527760 -50910720 - AluY SINE Alu -32 279 1 1741 247 108 11 chr17 34527760 34527936 -50910544 - LTR40a LTR ERVL -361 158 1 2017 136 0 0 chr17 34528446 34528766 -50909714 - AluSx SINE Alu 0 324 5 992 192 0 6 chr17 34529229 34529396 -50909084 + FAM SINE Alu 1 166 -9 482 274 70 5 chr17 34529623 34529918 -50908562 - MLT1L LTR MaLR -112 399 131 310 91 0 0 chr17 34529987 34530072 -50908408 - AluSq SINE Alu 0 322 238 1361 116 16 0 chr17 34530075 34530264 -50908216 - AluSq SINE Alu -121 192 1 2225 110 10 0 chr17 34530412 34530721 -50907759 + AluSx SINE Alu 1 312 0 338 266 83 53 chr17 34530822 34530991 -50907489 + MLT1J LTR MaLR 336 509 -2 910 162 5 81 chr17 34531210 34531280 -50907200 + MER20 DNA MER1_type 26 100 -119 2205 110 3 3 chr17 34531280 34531588 -50906892 + AluSx SINE Alu 1 308 -4 910 162 5 81 chr17 34531588 34531727 -50906753 + MER20 DNA MER1_type 100 219 0 524 262 76 6 chr17 34531736 34531908 -50906572 + L2 LINE L2 2509 2692 -622 645 85 0 0 chr17 34531927 34532009 -50906471 - AluY SINE Alu -228 82 1 471 212 0 44 chr17 34532013 34532150 -50906330 + L2 LINE L2 2725 2855 -459 854 199 93 42 chr17 34532177 34532393 -50906087 - AluJo SINE Alu 0 312 86 941 259 81 19 chr17 34532393 34532574 -50905906 + L2 LINE L2 2950 3118 -195 2012 101 29 0 chr17 34532574 34532896 -50905584 - AluSq SINE Alu 0 330 1 941 259 81 19 chr17 34532896 34533033 -50905447 + L2 LINE L2 3118 3289 -24 1459 121 128 24 chr17 34533036 34533285 -50905195 - AluJb SINE Alu -17 295 21 465 220 53 8 chr17 34533507 34533639 -50904841 - MIR SINE MIR -44 218 81 322 299 83 123 chr17 34534928 34535049 -50903431 - L2 LINE L2 -4 3268 3144 1914 112 94 3 chr17 34535049 34535335 -50903145 + AluSx SINE Alu 1 312 0 322 299 83 123 chr17 34535335 34535497 -50902983 - L2 LINE L2 -128 3144 2977 2082 114 3 3 chr17 34535497 34535794 -50902686 - AluSx SINE Alu -15 297 1 322 299 83 123 chr17 34535794 34535990 -50902490 - L2 LINE L2 -295 2977 2807 652 273 120 5 chr17 34536180 34536396 -50902084 - MIR SINE MIR 0 262 22 186 347 56 0 chr17 34537199 34537271 -50901209 + MIR SINE MIR 48 123 -85 888 283 9 22 chr17 34537362 34537592 -50900888 + MIR SINE MIR 7 233 -29 184 339 18 0 chr17 34538794 34538850 -50899630 - MIR SINE MIR -62 146 90 374 292 30 48 chr17 34540309 34540477 -50898003 - MIR3 SINE MIR -36 172 8 211 182 0 0 chr17 34542191 34542224 -50896256 + polypurine Low_complexity Low_complexity 2 34 0 1490 167 104 19 chr17 34542678 34542845 -50895635 - AluJb SINE Alu -6 296 96 180 0 0 0 chr17 34542845 34542865 -50895615 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1490 167 104 19 chr17 34542865 34542967 -50895513 - AluJb SINE Alu -206 96 4 215 219 172 0 chr17 34544093 34544157 -50894323 - MIR SINE MIR -86 122 48 492 280 147 7 chr17 34546248 34546464 -50892016 - MIR SINE MIR -32 230 2 208 262 16 33 chr17 34547070 34547131 -50891349 - L2 LINE L2 -5 3267 3208 * 255 329 39 78 chr17 34547127 34547410 -50891070 + L2 LINE L2 2980 3251 -21 288 344 55 27 chr17 34547929 34548112 -50890368 + L3b LINE CR1 1274 1461 -122 1449 244 35 73 chr17 34548919 34549261 -50889219 + L1MC4a LINE L1 5276 5081 -1065 2020 134 7 3 chr17 34549261 34549560 -50888920 - AluJb SINE Alu -12 300 1 1449 244 35 73 chr17 34549560 34549873 -50888607 + L1MC4a LINE L1 5080 5403 -743 813 179 8 0 chr17 34549874 34550008 -50888472 + AluJo SINE Alu 2 136 -176 2291 89 3 13 chr17 34550126 34550440 -50888040 + AluSx SINE Alu 1 311 -1 388 380 33 40 chr17 34551295 34551595 -50886885 + L2 LINE L2 2970 3267 -5 224 371 0 0 chr17 34552171 34552260 -50886220 + L2 LINE L2 2890 2978 -294 251 273 83 25 chr17 34552560 34552681 -50885799 - MER20B DNA MER1_type -620 163 36 246 279 250 0 chr17 34552725 34552861 -50885619 - MIR SINE MIR -9 253 84 1848 109 36 0 chr17 34552920 34553167 -50885313 - AluSq SINE Alu -57 256 1 257 226 107 12 chr17 34553199 34553283 -50885197 + L2 LINE L2 3169 3260 -12 190 333 42 42 chr17 34553293 34553413 -50885067 + MIR SINE MIR 46 165 -97 299 250 20 20 chr17 34553722 34553822 -50884658 + MIR SINE MIR 6 105 -157 305 239 5 69 chr17 34555107 34555295 -50883185 + C-rich Low_complexity Low_complexity 5 180 0 24 67 0 0 chr17 34555356 34555401 -50883079 + GC_rich Low_complexity Low_complexity 1 45 0 289 212 141 20 chr17 34556115 34556214 -50882266 - MIR SINE MIR -34 228 118 2300 91 0 7 chr17 34556698 34556996 -50881484 - AluSc SINE Alu -13 296 1 510 271 98 19 chr17 34557259 34557473 -50881007 + MIR SINE MIR 13 243 -19 1287 164 60 4 chr17 34557878 34558110 -50880370 + AluJb SINE Alu 6 250 -62 487 171 171 51 chr17 34559620 34559778 -50878702 - MER5B DNA MER1_type 0 178 2 229 326 156 14 chr17 34562432 34562573 -50875907 + MIR3 SINE MIR 27 187 -21 2181 115 0 10 chr17 34564926 34565221 -50873259 - AluSx SINE Alu -20 292 1 864 118 7 29 chr17 34566458 34566594 -50871886 + FLAM_C SINE Alu 1 133 0 264 30 0 0 chr17 34566605 34566638 -50871842 + (TA)n Simple_repeat Simple_repeat 1 33 0 749 180 0 0 chr17 34567342 34567464 -50871016 - FLAM_C SINE Alu -19 124 3 1538 234 82 57 chr17 34567537 34568136 -50870344 + L1MD2 LINE L1 5743 6356 -3 223 377 9 18 chr17 34568206 34568320 -50870160 + MIR SINE MIR 35 147 -61 180 111 0 0 chr17 34568385 34568412 -50870068 + (A)n Simple_repeat Simple_repeat 1 27 0 763 156 0 25 chr17 34568482 34568604 -50869876 - FLAM_A SINE Alu -14 128 10 414 0 0 0 chr17 34568821 34568867 -50869613 + (CA)n Simple_repeat Simple_repeat 1 46 0 203 147 0 0 chr17 34571858 34571892 -50866588 + (TC)n Simple_repeat Simple_repeat 2 35 0 211 225 0 0 chr17 34572432 34572472 -50866008 + CT-rich Low_complexity Low_complexity 1 40 0 863 177 14 7 chr17 34572472 34572619 -50865861 - AluJ SINE Alu -32 280 133 499 230 93 14 chr17 34574356 34574495 -50863985 + MER103 DNA DNA 1 150 -16 2548 71 0 3 chr17 34574524 34574833 -50863647 - AluY SINE Alu -3 308 1 2295 67 0 11 chr17 34575409 34575692 -50862788 + AluY SINE Alu 1 280 -31 810 163 23 0 chr17 34576262 34576391 -50862089 - AluJ SINE Alu -170 132 1 209 255 96 53 chr17 34577202 34577296 -50861184 + MIR SINE MIR 99 196 -66 278 343 31 1 chr17 34577481 34577622 -50860858 - MIR SINE MIR -70 138 30 322 345 27 0 chr17 34578324 34578434 -50860046 - MIR SINE MIR -98 164 52 23 0 0 0 chr17 34578497 34578520 -50859960 + AT_rich Low_complexity Low_complexity 1 23 0 2125 120 7 0 chr17 34579431 34579723 -50858757 + AluSx SINE Alu 5 298 -14 2184 83 7 4 chr17 34579730 34580052 -50858428 + AluSc SINE Alu 1 323 0 2195 89 13 40 chr17 34580235 34580538 -50857942 + AluSq SINE Alu 1 295 -18 374 245 50 29 chr17 34580655 34580794 -50857686 + MER5B DNA MER1_type 2 143 -35 395 235 30 3 chr17 34581140 34581307 -50857173 + MIR SINE MIR 11 232 -30 2042 123 0 63 chr17 34581345 34581663 -50856817 + AluSx SINE Alu 1 298 -14 2467 76 0 3 chr17 34582135 34582437 -50856043 - AluSg SINE Alu -9 301 1 334 179 51 13 chr17 34583279 34583357 -50855123 + L2 LINE L2 2282 2362 -952 2200 119 3 10 chr17 34583540 34583851 -50854629 + AluSx SINE Alu 1 309 -3 1415 176 34 0 chr17 34584253 34584347 -50854133 + AluJo SINE Alu 35 124 -188 2365 93 0 3 chr17 34584347 34584647 -50853833 + AluY SINE Alu 1 299 -12 1415 176 34 0 chr17 34584647 34584791 -50853689 + AluJo SINE Alu 124 281 -31 192 77 0 0 chr17 34584796 34584822 -50853658 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr17 34585289 34585317 -50853163 + AT_rich Low_complexity Low_complexity 1 28 0 2325 101 3 0 chr17 34586790 34587088 -50851392 + AluSq SINE Alu 1 299 -14 526 248 59 62 chr17 34587141 34587448 -50851032 + L1MC5 LINE L1 7623 7928 -33 2161 132 0 0 chr17 34587456 34587752 -50850728 + AluSx SINE Alu 2 297 -15 2437 92 0 13 chr17 34588445 34588785 -50849695 + AluSp SINE Alu 1 336 0 1436 171 84 31 chr17 34588790 34589077 -50849403 + AluJb SINE Alu 1 302 -10 257 162 0 0 chr17 34589149 34589186 -50849294 - Alu SINE Alu -265 38 2 2054 121 0 24 chr17 34589223 34589520 -50848960 - AluSx SINE Alu -16 296 7 1858 166 0 3 chr17 34589594 34589895 -50848585 + AluJb SINE Alu 1 300 -12 28 0 0 0 chr17 34589899 34589927 -50848553 + AT_rich Low_complexity Low_complexity 1 28 0 662 191 73 59 chr17 34590238 34590442 -50848038 - L1MC5 LINE L1 -1045 6916 6710 1876 146 29 0 chr17 34591228 34591543 -50846937 + MER33 DNA MER1_type 1 324 0 1799 79 4 0 chr17 34591996 34592224 -50846256 + AluSp SINE Alu 71 299 -14 403 247 12 12 chr17 34592325 34592410 -50846070 + MER58 DNA MER1_type 9 93 -293 1029 156 0 11 chr17 34592435 34592679 -50845801 + AluSx SINE Alu 2 304 -6 1139 144 56 84 chr17 34592682 34592966 -50845514 + MER58 DNA MER1_type 2144 2419 -1 5702 153 90 74 chr17 34593138 34593621 -50844859 - Charlie1a DNA MER1_type -1307 1454 980 2100 136 0 7 chr17 34593621 34593929 -50844551 + AluSx SINE Alu 3 308 -4 5702 153 90 74 chr17 34593929 34594066 -50844414 - Charlie1a DNA MER1_type -1781 980 847 2164 127 0 19 chr17 34594066 34594380 -50844100 - AluSx SINE Alu -4 308 1 5702 153 90 74 chr17 34594380 34595166 -50843314 - Charlie1a DNA MER1_type -1914 847 24 23 54 0 0 chr17 34595873 34595910 -50842570 + AT_rich Low_complexity Low_complexity 1 37 0 223 231 92 0 chr17 34596188 34596253 -50842227 - MIR SINE MIR -101 107 37 479 309 36 6 chr17 34596264 34596432 -50842048 + MER5B DNA MER1_type 5 177 -1 701 207 21 85 chr17 34598388 34598433 -50840047 + MER5B DNA MER1_type 1 47 -131 1936 162 0 16 chr17 34598433 34598741 -50839739 - AluJb SINE Alu -9 303 1 701 207 21 85 chr17 34598741 34598883 -50839597 + MER5B DNA MER1_type 47 176 -2 1727 93 31 4 chr17 34600558 34600816 -50837664 - L1MA3 LINE L1 0 6305 6041 2096 118 7 0 chr17 34601165 34601466 -50837014 + AluSx SINE Alu 1 303 0 888 183 26 0 chr17 34601491 34601644 -50836836 + FRAM SINE Alu 3 159 -17 26 30 0 0 chr17 34601644 34601677 -50836803 + AT_rich Low_complexity Low_complexity 1 33 0 1211 129 0 0 chr17 34602533 34602704 -50835776 + AluJo SINE Alu 1 171 -141 543 200 0 0 chr17 34602706 34602806 -50835674 - AluSc SINE Alu -80 229 130 1917 142 14 0 chr17 34602809 34603098 -50835382 - AluSq SINE Alu -5 308 16 578 174 37 0 chr17 34603528 34603637 -50834843 + L1MB5 LINE L1 6062 6174 0 2544 40 24 0 chr17 34603788 34604084 -50834396 + AluY SINE Alu 1 303 -8 913 136 0 0 chr17 34605564 34605704 -50832776 + FLAM_C SINE Alu 1 140 -3 207 186 0 0 chr17 34606576 34606619 -50831861 + G-rich Low_complexity Low_complexity 1 43 0 276 289 56 0 chr17 34607176 34607266 -50831214 + MIR SINE MIR 120 214 -48 497 171 246 42 chr17 34607644 34607761 -50830719 + L1ME4a LINE L1 5819 5911 -210 2115 135 3 0 chr17 34607761 34608064 -50830416 + AluSx SINE Alu 1 304 -8 497 171 246 42 chr17 34608064 34608186 -50830294 + L1ME4a LINE L1 5911 6107 -14 236 288 0 0 chr17 34608538 34608597 -50829883 - L2 LINE L2 -673 2641 2583 225 293 250 16 chr17 34608598 34608741 -50829739 - MIR SINE MIR 0 262 154 1873 66 0 13 chr17 34608741 34608969 -50829511 + AluY SINE Alu 1 225 -86 267 79 0 0 chr17 34608969 34609007 -50829473 + (CA)n Simple_repeat Simple_repeat 1 38 0 225 293 250 16 chr17 34609007 34609050 -50829430 - MIR SINE MIR -107 155 31 202 298 214 34 chr17 34609064 34609420 -50829060 - L2 LINE L2 -864 2450 2031 263 344 119 4 chr17 34609548 34609793 -50828687 - L2 LINE L2 -1328 1986 1710 1923 151 10 0 chr17 34609793 34610085 -50828395 - AluJb SINE Alu -17 295 1 189 248 133 29 chr17 34610118 34610223 -50828257 + L2 LINE L2 2160 2275 -1039 905 178 13 7 chr17 34610299 34610445 -50828035 + FRAM SINE Alu 4 151 -10 366 23 0 0 chr17 34610445 34610488 -50827992 + (GA)n Simple_repeat Simple_repeat 2 44 0 2263 128 0 0 chr17 34610564 34610914 -50827566 + AluSx SINE Alu 1 350 0 363 228 65 41 chr17 34611016 34611139 -50827341 + MIR SINE MIR 110 235 -27 383 269 59 43 chr17 34611191 34611300 -50827180 + L2 LINE L2 2432 2547 -767 2260 85 37 0 chr17 34611300 34611594 -50826886 + AluSg1 SINE Alu 1 305 -4 383 269 59 43 chr17 34611594 34611670 -50826810 + L2 LINE L2 2547 2620 -694 2171 120 3 7 chr17 34611763 34612071 -50826409 + AluSx SINE Alu 1 307 -5 517 284 106 75 chr17 34612118 34612157 -50826323 + L2 LINE L2 2677 2713 -600 2279 90 17 0 chr17 34612157 34612447 -50826033 + AluSq SINE Alu 1 295 -18 426 53 0 0 chr17 34612447 34612504 -50825976 + (TA)n Simple_repeat Simple_repeat 1 57 0 517 284 106 75 chr17 34612504 34612848 -50825632 + L2 LINE L2 2712 3069 -244 2125 119 0 32 chr17 34612885 34613197 -50825283 - AluSg SINE Alu -8 302 1 2121 107 3 3 chr17 34613202 34613492 -50824988 - AluSp SINE Alu -5 308 19 426 184 20 20 chr17 34613768 34613866 -50824614 + LTR67 LTR ERVL 458 555 -2 661 233 78 36 chr17 34616904 34617123 -50821357 - MIR SINE MIR -14 248 21 2282 120 0 0 chr17 34619466 34619775 -50818705 - AluSx SINE Alu -3 309 1 2026 157 0 3 chr17 34620244 34620550 -50817930 - AluJb SINE Alu -7 305 1 1541 151 48 19 chr17 34620575 34620846 -50817634 - AluJo SINE Alu -20 292 14 1500 165 102 18 chr17 34620896 34621181 -50817299 - AluJo SINE Alu -3 309 1 1916 81 119 8 chr17 34621190 34621451 -50817029 - AluSg1 SINE Alu -19 290 1 249 300 55 27 chr17 34621580 34621690 -50816790 - MIR SINE MIR -76 132 20 2101 107 0 4 chr17 34621857 34622128 -50816352 - AluSg SINE Alu -40 270 1 1070 170 0 0 chr17 34622130 34622295 -50816185 - AluSg/x SINE Alu -20 290 126 2063 131 0 0 chr17 34622427 34622891 -50815589 + AluSq SINE Alu 1 313 0 2129 114 4 0 chr17 34623323 34623623 -50814857 - AluSx SINE Alu 0 301 1 21 57 0 0 chr17 34624078 34624113 -50814367 + AT_rich Low_complexity Low_complexity 1 35 0 2381 75 3 3 chr17 34624456 34624763 -50813717 + AluSg SINE Alu 1 307 -3 181 328 78 62 chr17 34624901 34625029 -50813451 + L2 LINE L2 3141 3270 -2 1188 119 0 6 chr17 34625867 34626044 -50812436 - AluSg/x SINE Alu -4 306 131 423 0 0 0 chr17 34626044 34626091 -50812389 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2146 85 7 0 chr17 34626094 34626375 -50812105 - AluSx SINE Alu -29 283 1 287 239 186 9 chr17 34626379 34626492 -50811988 - L2 LINE L2 -632 2682 2550 187 309 25 12 chr17 34627169 34627250 -50811230 + L2 LINE L2 3009 3090 -182 361 248 190 7 chr17 34627323 34627460 -50811020 + MIR SINE MIR 91 252 -10 1698 121 0 17 chr17 34627522 34627762 -50810718 - AluSx SINE Alu -75 237 2 349 282 92 25 chr17 34627809 34627972 -50810508 + MIR SINE MIR 16 189 -73 2282 105 0 0 chr17 34628109 34628394 -50810086 - AluSx SINE Alu -27 285 1 395 277 61 7 chr17 34628475 34628623 -50809857 - MIR SINE MIR -55 207 52 429 138 0 0 chr17 34629911 34629976 -50808504 - MLT1D LTR MaLR 0 505 441 2465 66 0 16 chr17 34629977 34630281 -50808199 - AluY SINE Alu -12 299 1 2007 113 31 0 chr17 34630306 34630598 -50807882 - L1PA13 LINE L1 -16 6147 5847 29 0 0 0 chr17 34630619 34630648 -50807832 + AT_rich Low_complexity Low_complexity 1 29 0 1390 135 0 0 chr17 34630701 34630894 -50807586 + AluSx SINE Alu 1 193 -119 2266 109 0 0 chr17 34631161 34631455 -50807025 - AluSg SINE Alu -14 296 3 2300 104 0 3 chr17 34631461 34631759 -50806721 - AluSx SINE Alu -14 298 2 2440 109 0 0 chr17 34631793 34632105 -50806375 - AluSx SINE Alu 0 312 1 24 0 0 0 chr17 34632206 34632230 -50806250 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr17 34632779 34632810 -50805670 + AT_rich Low_complexity Low_complexity 1 31 0 2044 130 3 7 chr17 34632917 34633216 -50805264 + AluSx SINE Alu 1 298 -14 546 255 91 39 chr17 34633384 34633615 -50804865 + L3 LINE CR1 1334 1576 -1 1723 168 3 49 chr17 34634289 34634616 -50803864 - AluJo SINE Alu 0 312 1 1144 206 55 41 chr17 34634987 34635279 -50803201 + AluJo SINE Alu 5 300 -2 1907 138 39 0 chr17 34636759 34637041 -50801439 - AluSx SINE Alu -19 293 1 1290 190 0 0 chr17 34637235 34637446 -50801034 + AluSx SINE Alu 29 239 -73 1462 179 0 0 chr17 34637560 34637806 -50800674 + AluJb SINE Alu 66 311 -1 1315 100 12 0 chr17 34638266 34638436 -50800044 - AluSg/x SINE Alu -15 297 126 2508 72 0 0 chr17 34638436 34638742 -50799738 - AluY SINE Alu -5 306 1 256 180 250 50 chr17 34638823 34638923 -50799557 - MIR3 SINE MIR -15 193 74 206 121 0 0 chr17 34639064 34639097 -50799383 + (T)n Simple_repeat Simple_repeat 1 33 0 190 0 67 0 chr17 34639399 34639429 -50799051 + (TA)n Simple_repeat Simple_repeat 2 33 0 257 186 52 0 chr17 34639446 34639543 -50798937 + (TA)n Simple_repeat Simple_repeat 2 103 0 916 187 25 102 chr17 34639734 34639893 -50798587 - MER20 DNA MER1_type 0 219 82 2165 114 7 3 chr17 34639893 34640190 -50798290 + AluSx SINE Alu 1 298 -14 916 187 25 102 chr17 34640190 34640265 -50798215 - MER20 DNA MER1_type -137 82 3 318 311 0 0 chr17 34641137 34641227 -50797253 + L1MC4 LINE L1 6614 6703 -1339 2892 37 0 0 chr17 34641239 34641565 -50796915 - LTR17 LTR ERV1 -454 326 1 7947 42 1 32 chr17 34641568 34642545 -50795935 - HERV17 LTR ERV1 -4 8622 7676 180 77 0 0 chr17 34643258 34643284 -50795196 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2281 98 0 0 chr17 34643284 34643569 -50794911 - AluSx SINE Alu -27 285 1 219 321 90 4 chr17 34643673 34643859 -50794621 - L2 LINE L2 -339 2974 2768 263 125 0 0 chr17 34646470 34646510 -50791970 - HSMAR1 DNA Mariner -1247 40 1 314 145 24 121 chr17 34647701 34647784 -50790696 + HAL1 LINE L1 2427 2501 -6 561 251 11 38 chr17 34647888 34648029 -50790451 + MER5B DNA MER1_type 1 137 -41 1707 169 0 36 chr17 34648029 34648330 -50790150 + AluJo SINE Alu 1 290 -22 561 251 11 38 chr17 34648330 34648371 -50790109 + MER5B DNA MER1_type 137 178 0 463 264 21 36 chr17 34648409 34648549 -50789931 + L2 LINE L2 3127 3264 -8 2376 100 3 0 chr17 34649005 34649304 -50789176 + AluSp SINE Alu 1 300 -13 254 214 180 11 chr17 34649508 34649597 -50788883 + MLT1J2 LTR MaLR 41 144 -405 290 227 76 33 chr17 34649768 34649894 -50788586 + MLT1J2 LTR MaLR 339 450 0 619 294 11 16 chr17 34650902 34651086 -50787394 + MIR SINE MIR 17 199 -63 1598 201 0 10 chr17 34651094 34651402 -50787078 + AluJb SINE Alu 1 305 -7 2172 112 0 7 chr17 34651413 34651728 -50786752 + AluSx SINE Alu 3 315 0 382 264 18 86 chr17 34651779 34651834 -50786646 - MIR SINE MIR -110 152 95 1404 209 35 39 chr17 34651834 34652117 -50786363 + AluJo SINE Alu 1 282 -30 258 105 0 0 chr17 34652120 34652158 -50786322 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 382 264 18 86 chr17 34652158 34652261 -50786219 - MIR SINE MIR -169 93 1 204 40 0 0 chr17 34652927 34652952 -50785528 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 1585 227 109 62 chr17 34653131 34653220 -50785260 + MER34 LTR ERV1 1 84 -458 1393 109 30 0 chr17 34653220 34653421 -50785059 + L1PB2 LINE L1 5940 6146 -5 1585 227 109 62 chr17 34653421 34653846 -50784634 + MER34 LTR ERV1 84 539 -3 718 229 133 30 chr17 34654151 34654422 -50784058 + MER34-int LTR ERV1 311 609 -5722 622 61 0 0 chr17 34654422 34654504 -50783976 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 1910 148 3 3 chr17 34654504 34654787 -50783693 - AluSx SINE Alu -28 284 2 302 145 105 66 chr17 34654790 34654866 -50783614 + MER34-int LTR ERV1 1417 1495 -4836 591 189 87 32 chr17 34655008 34655193 -50783287 + MER31-int LTR ERV1 995 1189 -3747 287 267 11 11 chr17 34655210 34655300 -50783180 + MER5B DNA MER1_type 86 175 -3 1549 203 0 13 chr17 34656638 34656939 -50781541 - AluJb SINE Alu -15 297 1 1903 155 16 7 chr17 34656995 34657299 -50781181 - AluJb SINE Alu -1 311 5 1821 159 14 10 chr17 34657714 34657834 -50780646 + AluJo SINE Alu 1 119 -193 324 0 0 0 chr17 34657834 34657870 -50780610 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2103 139 0 0 chr17 34657877 34658178 -50780302 + AluSx SINE Alu 1 301 -11 1821 159 14 10 chr17 34658178 34658344 -50780136 + AluJo SINE Alu 124 296 -16 2175 98 26 20 chr17 34658344 34658649 -50779831 + AluSp SINE Alu 1 307 -6 355 195 257 0 chr17 34658744 34658857 -50779623 + MIR SINE MIR 118 259 -3 417 318 93 50 chr17 34659235 34659458 -50779022 + L2 LINE L2 2509 2721 -593 2274 88 0 7 chr17 34659458 34659753 -50778727 - AluSc SINE Alu -16 293 1 2051 121 32 0 chr17 34659753 34660034 -50778446 - AluSx SINE Alu -22 290 1 417 318 93 50 chr17 34660034 34660152 -50778328 + L2 LINE L2 2720 2866 -448 623 286 83 89 chr17 34660188 34660513 -50777967 + L2 LINE L2 2948 3270 -2 1794 168 33 3 chr17 34660920 34661223 -50777257 - AluSq SINE Alu -1 312 1 2151 102 20 7 chr17 34661376 34661669 -50776811 - AluSx SINE Alu -15 297 1 13404 95 19 68 chr17 34661785 34662214 -50776266 - L1PA10 LINE L1 -24 6144 5696 2387 95 0 0 chr17 34662214 34662509 -50775971 - AluSq SINE Alu -13 300 6 13404 95 19 68 chr17 34662509 34665016 -50773464 - L1PA10 LINE L1 -472 5696 3359 1316 141 5 15 chr17 34665016 34665222 -50773258 - AluSg/x SINE Alu -32 278 75 1129 264 30 35 chr17 34665599 34665967 -50772513 - MER74B LTR ERVL -6 616 251 349 151 0 0 chr17 34666026 34666079 -50772401 - MER74B LTR ERVL -569 53 1 724 274 17 26 chr17 34666133 34666363 -50772117 - HERVL74 LTR ERVL -82 5603 5376 396 45 45 0 chr17 34666366 34666433 -50772047 + (TA)n Simple_repeat Simple_repeat 2 71 0 1882 221 72 46 chr17 34666444 34666689 -50771791 - HERVL74 LTR ERVL -461 5224 4987 1771 172 14 3 chr17 34666689 34666985 -50771495 - AluJo SINE Alu -13 299 1 1882 221 72 46 chr17 34666985 34667305 -50771175 - HERVL74 LTR ERVL -698 4987 4644 369 309 10 0 chr17 34667313 34667410 -50771070 - HERVL74 LTR ERVL -999 4686 4589 * 751 165 11 102 chr17 34667401 34667512 -50770968 - HERVL74 LTR ERVL -1612 4073 3982 1800 195 0 3 chr17 34667512 34667825 -50770655 + AluJb SINE Alu 1 312 0 751 165 11 102 chr17 34667825 34667889 -50770591 - HERVL74 LTR ERVL -1703 3982 3914 198 0 0 0 chr17 34667889 34667911 -50770569 + (CTTG)n Simple_repeat Simple_repeat 2 23 0 663 217 53 13 chr17 34667913 34668065 -50770415 - HERVL74 LTR ERVL -2042 3643 3486 * 7321 195 67 48 chr17 34668054 34669290 -50769190 - HERVL74 LTR ERVL -2345 3340 2129 2580 140 27 13 chr17 34669290 34669739 -50768741 + L1MC1 LINE L1 5879 6333 0 7321 195 67 48 chr17 34669739 34670543 -50767937 - HERVL74 LTR ERVL -3556 2129 1168 2190 116 0 25 chr17 34670543 34670862 -50767618 + AluSx SINE Alu 1 311 -1 7321 195 67 48 chr17 34670862 34671003 -50767477 - HERVL74 LTR ERVL -4517 1168 1031 3093 92 5 2 chr17 34671033 34671458 -50767022 + L1PA14 LINE L1 5735 6160 -1 2362 145 56 12 chr17 34671503 34671917 -50766563 + MSTB1 LTR MaLR 1 432 0 2272 160 46 0 chr17 34671961 34672354 -50766126 - LTR57 LTR ERVL 0 411 1 258 173 0 19 chr17 34672372 34672424 -50766056 - MER107 DNA MER1_type -79 118 68 4578 195 60 18 chr17 34672631 34673661 -50764819 + L1MDa LINE L1 1623 2725 -3815 2086 140 3 10 chr17 34673661 34673969 -50764511 + AluSx SINE Alu 1 306 -6 4578 195 60 18 chr17 34673969 34674250 -50764230 + L1MDa LINE L1 2725 2993 -3547 1086 213 29 0 chr17 34674254 34674461 -50764019 + AluJo SINE Alu 78 290 -22 1187 229 34 12 chr17 34674497 34674820 -50763660 + L1MDa LINE L1 3049 3378 -3162 192 40 0 0 chr17 34675036 34675061 -50763419 + (CGGGGG)n Simple_repeat Simple_repeat 3 27 0 10335 184 8 9 chr17 34676784 34678783 -50759697 + L1P LINE L1 981 2976 -3170 24 32 0 0 chr17 34678834 34678865 -50759615 + AT_rich Low_complexity Low_complexity 1 31 0 1731 86 40 7 chr17 34678880 34679227 -50759253 - MLT2A1 LTR ERVL -44 400 1 3651 63 6 13 chr17 34679227 34679701 -50758779 - HERVL-A1 LTR ERVL 0 5654 5184 11742 108 54 17 chr17 34679802 34681654 -50756826 - Harlequin LTR ERV1 -4976 1920 1 1892 186 50 48 chr17 34681654 34681982 -50756498 - LTR2B LTR ERV1 0 490 159 2306 108 0 0 chr17 34681982 34682277 -50756203 - AluY SINE Alu -16 295 1 1892 186 50 48 chr17 34682277 34682406 -50756074 - LTR2B LTR ERV1 -331 159 32 439 276 63 27 chr17 34683035 34683230 -50755250 + L1ME LINE L1 5477 5675 -461 22 35 0 0 chr17 34684629 34684658 -50753822 + GC_rich Low_complexity Low_complexity 1 29 0 883 107 8 0 chr17 34684700 34684822 -50753658 - FLAM_C SINE Alu -10 123 1 330 195 23 58 chr17 34685191 34685278 -50753202 - AluJ SINE Alu -100 202 119 30 0 0 0 chr17 34685279 34685309 -50753171 + AT_rich Low_complexity Low_complexity 1 30 0 2283 108 0 0 chr17 34685309 34685616 -50752864 - AluSq SINE Alu -6 307 1 802 91 99 8 chr17 34685619 34685740 -50752740 - AluJ SINE Alu -180 132 1 329 246 18 53 chr17 34686140 34686254 -50752226 + G-rich Low_complexity Low_complexity 1 110 0 712 211 20 7 chr17 34686369 34686521 -50751959 - FRAM SINE Alu -11 155 2 423 0 0 0 chr17 34686777 34686824 -50751656 + (TG)n Simple_repeat Simple_repeat 2 48 0 413 254 16 16 chr17 34687281 34687407 -50751073 - L1MA10 LINE L1 -7 6327 6202 461 140 104 116 chr17 34687420 34687525 -50750955 + MER96B DNA MER1_type? 18 123 -294 1541 167 29 7 chr17 34687525 34687852 -50750628 + AluJb SINE Alu 1 333 0 461 140 104 116 chr17 34687852 34687909 -50750571 + MER96B DNA MER1_type? 123 179 -238 226 254 75 0 chr17 34688029 34688096 -50750384 - L1M4 LINE L1 -1288 4858 4787 354 286 43 49 chr17 34688163 34688348 -50750132 - L1M4 LINE L1 -1995 4151 3968 218 140 0 20 chr17 34688795 34688845 -50749635 + (CAAAAA)n Simple_repeat Simple_repeat 5 53 0 196 281 18 0 chr17 34689784 34689841 -50748639 - L2 LINE L2 -4 3309 3252 21 0 0 0 chr17 34691309 34691330 -50747150 + AT_rich Low_complexity Low_complexity 1 21 0 331 308 10 0 chr17 34692878 34692982 -50745498 + MLT1I LTR MaLR 73 177 -232 361 277 66 24 chr17 34692982 34693148 -50745332 - L1M4 LINE L1 -2223 3923 3751 1434 191 11 15 chr17 34693173 34693446 -50745034 - AluJb SINE Alu -32 280 9 2403 76 0 0 chr17 34693635 34693937 -50744543 - AluSx SINE Alu -10 302 1 2374 62 0 3 chr17 34694507 34694795 -50743685 - AluY SINE Alu -21 290 4 180 0 0 0 chr17 34696112 34696132 -50742348 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 4012 182 43 12 chr17 34696496 34697526 -50740954 + L1P4 LINE L1 4427 5487 -679 1398 215 53 6 chr17 34697534 34697892 -50740588 + L1 LINE L1 3179 3553 -2593 988 178 41 25 chr17 34699092 34699289 -50739191 - MLT1A1 LTR MaLR 0 365 166 4068 165 77 58 chr17 34699293 34700379 -50738101 - MER52C LTR ERV1 0 1278 23 793 174 101 7 chr17 34700380 34700529 -50737951 - MLT1A1 LTR MaLR -202 163 1 2157 114 3 19 chr17 34700559 34700875 -50737605 + AluSq SINE Alu 1 311 -2 6977 102 22 11 chr17 34700910 34701905 -50736575 - LTR13 LTR ERVK 0 1007 2 320 306 91 29 chr17 34702089 34702364 -50736116 + L1M4 LINE L1 3113 3404 -2742 333 265 144 50 chr17 34704801 34704982 -50733498 - L1ME LINE L1 -460 5595 5401 732 259 59 47 chr17 34705080 34705533 -50732947 - L1ME LINE L1 -784 5296 4835 349 321 54 40 chr17 34705723 34705947 -50732533 - L1ME LINE L1 -5311 759 533 728 51 0 10 chr17 34706189 34706287 -50732193 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 847 118 25 0 chr17 34706287 34706406 -50732074 - AluJb SINE Alu -190 122 1 374 308 60 41 chr17 34706448 34706766 -50731714 - L1ME LINE L1 -5660 410 87 234 143 0 0 chr17 34706766 34706815 -50731665 + (TA)n Simple_repeat Simple_repeat 2 50 0 1821 166 3 7 chr17 34706818 34707108 -50731372 - AluJb SINE Alu -23 289 1 1038 116 14 0 chr17 34707735 34707935 -50730545 - AluSg/x SINE Alu 0 340 139 2032 102 0 59 chr17 34708248 34708583 -50729897 + AluSq SINE Alu 1 317 0 419 283 105 27 chr17 34708987 34709206 -50729274 - L1M4 LINE L1 -2936 3210 2975 988 132 0 22 chr17 34709623 34709805 -50728675 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1757 88 0 4 chr17 34709818 34710045 -50728435 - AluSc SINE Alu -11 298 73 180 0 0 0 chr17 34710045 34710065 -50728415 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr17 34710246 34710274 -50728206 + AT_rich Low_complexity Low_complexity 1 28 0 348 115 16 0 chr17 34710274 34710335 -50728145 - L1PB1 LINE L1 0 6151 6090 32723 97 9 8 chr17 34710337 34715934 -50722546 - L1PA7 LINE L1 -11 7581 1148 292 308 0 0 chr17 34715957 34716048 -50722432 + HsTC2 DNA Tc2 36 126 -1772 1939 153 3 0 chr17 34716235 34716529 -50721951 - AluJb SINE Alu -17 295 1 260 319 88 0 chr17 34716912 34717003 -50721477 - MIR SINE MIR -62 200 102 1711 35 5 10 chr17 34718055 34718256 -50720224 - L1PA4 LINE L1 -5 6150 5951 1389 184 26 71 chr17 34718295 34718605 -50719875 - AluJb SINE Alu -16 296 1 1906 181 70 5 chr17 34718730 34719129 -50719351 - L1MC3 LINE L1 -7 7778 7354 1101 199 61 64 chr17 34719129 34719425 -50719055 - MER49 LTR ERV1 0 923 627 2115 115 3 7 chr17 34719425 34719720 -50718760 - AluSx SINE Alu -18 294 1 1101 199 61 64 chr17 34719720 34719765 -50718715 - MER49 LTR ERV1 -296 627 583 3835 158 5 2 chr17 34719766 34720375 -50718105 - MER49 LTR ERV1 -304 619 9 1667 204 89 33 chr17 34720384 34720811 -50717669 - L1MC3 LINE L1 -429 7356 6906 7843 84 10 9 chr17 34720813 34721616 -50716864 - L1PA8 LINE L1 0 6172 5371 2162 121 3 0 chr17 34721616 34721913 -50716567 - AluSx SINE Alu -14 298 1 7843 84 10 9 chr17 34721913 34722956 -50715524 - L1PA8 LINE L1 -801 5371 4316 628 119 129 0 chr17 34722956 34723057 -50715423 - L1MD3 LINE L1 -1168 6827 6714 1159 229 35 3 chr17 34723121 34723435 -50715045 + MER33 DNA MER1_type 1 324 0 1155 174 27 49 chr17 34723500 34723724 -50714756 + MER20 DNA MER1_type 1 219 0 2396 84 7 3 chr17 34724241 34724549 -50713931 + AluSq SINE Alu 1 309 -4 894 176 6 6 chr17 34724551 34724727 -50713753 + AluSg/x SINE Alu 135 310 0 208 198 12 99 chr17 34726071 34726152 -50712328 + MIR3 SINE MIR 110 183 -25 185 271 0 51 chr17 34726837 34726896 -50711584 + MIR SINE MIR 58 113 -95 2405 78 0 7 chr17 34727517 34727824 -50710656 + AluY SINE Alu 1 305 -6 1062 41 0 0 chr17 34727910 34728033 -50710447 + AluY SINE Alu 181 303 -8 192 40 0 0 chr17 34728163 34728188 -50710292 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1106 165 147 27 chr17 34728402 34728572 -50709908 - AluJo SINE Alu 0 315 106 348 24 0 0 chr17 34728572 34728613 -50709867 + (TG)n Simple_repeat Simple_repeat 2 42 0 1106 165 147 27 chr17 34728613 34728699 -50709781 - AluJo SINE Alu -209 106 32 2748 183 60 1 chr17 34729439 34729986 -50708494 - L1MB7 LINE L1 -19 6165 5581 2412 68 0 3 chr17 34730187 34730481 -50707999 + AluY SINE Alu 1 293 -18 24 53 0 0 chr17 34730488 34730526 -50707954 + AT_rich Low_complexity Low_complexity 1 38 0 2190 92 0 7 chr17 34731537 34731819 -50706661 + AluY SINE Alu 1 280 -31 2216 177 94 24 chr17 34731819 34732277 -50706203 - LTR2B LTR ERV1 0 490 1 39170 89 14 13 chr17 34732277 34738001 -50700479 - Harlequin LTR ERV1 0 6896 1169 7897 67 4 0 chr17 34738101 34739075 -50699405 - HERVL-A1 LTR ERVL -558 5096 4119 8622 62 10 0 chr17 34739078 34740140 -50698340 - HERVL-A1 LTR ERVL -4581 1073 1 3358 84 18 11 chr17 34740140 34740581 -50697899 - MLT2A1 LTR ERVL 0 444 1 1315 246 134 0 chr17 34740582 34740896 -50697584 + L1ME1 LINE L1 5682 6065 -101 273 29 0 0 chr17 34740896 34740930 -50697550 + (TG)n Simple_repeat Simple_repeat 1 34 0 1315 246 134 0 chr17 34740930 34741025 -50697455 + L1ME1 LINE L1 6065 6146 -20 1959 141 0 17 chr17 34741309 34741606 -50696874 - AluJb SINE Alu -20 292 1 305 283 69 0 chr17 34741700 34741845 -50696635 - L1M4 LINE L1 -1197 4949 4795 236 250 31 10 chr17 34741930 34742026 -50696454 - L1M4 LINE L1 -1492 4654 4557 863 98 0 0 chr17 34742033 34742145 -50696335 - AluSq SINE Alu -17 296 185 519 62 0 0 chr17 34742145 34742209 -50696271 - AluSq SINE Alu -215 98 35 21 0 0 0 chr17 34742261 34742282 -50696198 + AT_rich Low_complexity Low_complexity 1 21 0 495 254 166 16 chr17 34742377 34742570 -50695910 + LTR50 LTR ERVL 574 795 0 351 278 39 53 chr17 34742649 34742930 -50695550 + L1M4 LINE L1 4101 4377 -1769 1565 236 40 69 chr17 34742957 34743348 -50695132 - L1MEc LINE L1 -4279 2117 1717 2321 67 0 3 chr17 34743348 34743631 -50694849 + AluSq SINE Alu 1 282 -31 251 28 28 0 chr17 34743634 34743670 -50694810 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1565 236 40 69 chr17 34743670 34743842 -50694638 - L1MEc LINE L1 -4681 1715 1566 320 250 83 88 chr17 34743931 34744147 -50694333 + L1ME4a LINE L1 5833 6047 -74 1345 138 46 72 chr17 34744776 34744961 -50693519 - AluJb SINE Alu -15 297 122 279 0 0 0 chr17 34744961 34744992 -50693488 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1345 138 46 72 chr17 34744992 34745111 -50693369 - AluJb SINE Alu -190 122 1 1132 178 158 0 chr17 34745853 34745972 -50692508 + AluJo SINE Alu 1 100 -212 254 50 25 0 chr17 34745972 34746012 -50692468 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1132 178 158 0 chr17 34746012 34746133 -50692347 + AluJo SINE Alu 100 279 -33 271 23 45 23 chr17 34746135 34746179 -50692301 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 316 335 93 6 chr17 34747402 34747584 -50690896 - MIR SINE MIR -14 248 51 280 313 93 70 chr17 34747663 34747877 -50690603 + L2 LINE L2 1881 2099 -1215 282 335 112 58 chr17 34748008 34748286 -50690194 + L2 LINE L2 2980 3272 0 329 344 17 28 chr17 34750413 34750593 -50687887 - MER5B DNA MER1_type 0 178 1 2322 67 0 0 chr17 34751294 34751608 -50686872 + AluY SINE Alu 1 314 0 996 249 98 30 chr17 34753527 34753896 -50684584 - L1MEc LINE L1 -5649 556 163 2220 113 10 0 chr17 34754260 34754562 -50683918 + AluSx SINE Alu 1 305 -7 1133 180 86 112 chr17 34754700 34755084 -50683396 + MLT1B LTR MaLR 1 374 -16 27 29 0 0 chr17 34755631 34755665 -50682815 + AT_rich Low_complexity Low_complexity 1 34 0 936 173 12 23 chr17 34755909 34756082 -50682398 - FRAM SINE Alu -10 166 1 388 169 102 36 chr17 34756191 34756303 -50682177 - L1MC3 LINE L1 -1 7778 6254 21 0 0 0 chr17 34756575 34756596 -50681884 + AT_rich Low_complexity Low_complexity 1 21 0 1072 206 61 16 chr17 34756599 34756846 -50681634 + AluJo SINE Alu 42 299 -13 2102 200 67 21 chr17 34756954 34757533 -50680947 - L1MC4 LINE L1 -139 7903 7298 189 0 0 0 chr17 34757534 34757555 -50680925 + (TG)n Simple_repeat Simple_repeat 1 21 0 330 288 89 14 chr17 34757622 34757768 -50680712 + L1M4 LINE L1 2750 2906 -3240 517 246 36 36 chr17 34757866 34758086 -50680394 + L1M4 LINE L1 3611 3830 -2316 726 204 17 17 chr17 34758094 34758270 -50680210 + AluJo SINE Alu 120 295 -17 600 235 16 22 chr17 34758270 34758453 -50680027 + L1M4 LINE L1 3844 4025 -2121 1308 167 23 0 chr17 34758459 34758574 -50679906 + AluJo SINE Alu 7 118 -194 204 40 0 0 chr17 34758574 34758599 -50679881 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1308 167 23 0 chr17 34758599 34758704 -50679776 + AluJo SINE Alu 118 232 -80 1240 152 116 83 chr17 34759132 34759434 -50679046 - AluJb SINE Alu 0 312 1 2073 122 0 25 chr17 34759442 34759507 -50678973 - AluSq SINE Alu 0 584 519 1017 88 6 28 chr17 34759507 34759689 -50678791 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2073 122 0 25 chr17 34759689 34760034 -50678446 - AluSq SINE Alu -65 519 1 3174 95 95 6 chr17 34761337 34761851 -50676629 + MER51A LTR ERV1 75 634 0 1052 80 34 46 chr17 34761851 34762026 -50676454 + MER51A-int LTR ERV1 1 173 -7643 * 4128 166 9 23 chr17 34762017 34762814 -50675666 + MER51A-int LTR ERV1 329 1114 -6702 1830 91 115 3 chr17 34762813 34763109 -50675371 + MER57-int LTR ERV1 5610 5938 -1599 * 3606 115 46 5 chr17 34763107 34763672 -50674808 + MER57-int LTR ERV1 6560 7147 -390 507 114 80 0 chr17 34763675 34763763 -50674717 + LTR54B LTR ERV1 5 99 -399 555 78 22 22 chr17 34763763 34763853 -50674627 + MER57-int LTR ERV1 7265 7354 -183 303 299 41 21 chr17 34765805 34765902 -50672578 + L1ME LINE L1 5552 5650 -471 285 222 119 24 chr17 34766266 34766392 -50672088 + L1ME LINE L1 5706 5843 -278 258 318 0 0 chr17 34766686 34766749 -50671731 + L1M4c LINE L1 173 235 -6078 581 262 133 36 chr17 34767180 34767542 -50670938 + L1M4c LINE L1 540 936 -5448 * 4852 155 20 37 chr17 34767539 34768753 -50669727 + L1MA8 LINE L1 4926 6113 -178 1559 214 0 30 chr17 34768753 34769056 -50669424 - AluJo SINE Alu -18 294 1 4852 155 20 37 chr17 34769056 34769230 -50669250 + L1MA8 LINE L1 6113 6288 -3 214 124 103 69 chr17 34769537 34769682 -50668798 + (CTTAA)n Simple_repeat Simple_repeat 1 150 0 1819 185 48 11 chr17 34770008 34770360 -50668120 - MLT1A1 LTR MaLR 0 365 1 2336 72 0 10 chr17 34772222 34772527 -50665953 + AluSc SINE Alu 1 302 -7 2316 74 0 3 chr17 34772803 34773131 -50665349 - AluSx SINE Alu 0 328 2 274 321 0 37 chr17 34773981 34774143 -50664337 - MLT1K LTR MaLR -13 575 420 930 266 45 42 chr17 34774173 34774925 -50663555 - L1ME LINE L1 -413 5826 5078 1406 167 31 0 chr17 34774945 34775173 -50663307 + AluSx SINE Alu 49 283 -29 237 108 0 0 chr17 34775179 34775216 -50663264 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 2151 134 15 50 chr17 34775371 34775774 -50662706 - Tigger2a DNA MER2_type -45 389 1 1556 283 86 35 chr17 34775843 34776524 -50661956 - L1ME LINE L1 -1389 4826 4056 648 59 0 0 chr17 34776524 34776609 -50661871 + L1PA6 LINE L1 6068 6152 -2 1556 283 86 35 chr17 34776609 34777122 -50661358 - L1ME LINE L1 -2159 4056 3571 772 246 6 0 chr17 34777130 34777301 -50661179 - AluJo SINE Alu -21 291 120 5628 162 13 3 chr17 34777550 34779462 -50659018 - L1PB2 LINE L1 -2 6149 4219 4950 165 29 14 chr17 34779463 34780284 -50658196 - L1 LINE L1 -1519 4627 3786 2262 113 0 3 chr17 34780284 34780593 -50657887 - AluSq SINE Alu -5 308 1 4950 165 29 14 chr17 34780593 34780810 -50657670 - L1 LINE L1 -2360 3786 3574 636 289 106 85 chr17 34780810 34781518 -50656962 - L1ME LINE L1 -5038 1358 636 302 314 84 50 chr17 34781723 34781962 -50656518 + L1MC4a LINE L1 5904 6150 -1658 356 251 62 78 chr17 34782756 34782865 -50655615 + MIR3 SINE MIR 1 110 -152 1051 171 0 0 chr17 34782865 34783029 -50655451 - FRAM SINE Alu -2 164 1 356 251 62 78 chr17 34783029 34783141 -50655339 + MIR3 SINE MIR 110 220 -42 366 245 38 19 chr17 34783217 34783323 -50655157 + HsTC2 DNA Tc2 4 111 -1787 4944 170 31 12 chr17 34783666 34784406 -50654074 + L1MA9 LINE L1 4859 5584 -728 1565 211 0 13 chr17 34784406 34784709 -50653771 + AluJo SINE Alu 2 300 -12 4944 170 31 12 chr17 34784709 34784885 -50653595 + L1MA9 LINE L1 5584 5755 -557 288 0 0 0 chr17 34784885 34784917 -50653563 + (CA)n Simple_repeat Simple_repeat 2 33 0 4944 170 31 12 chr17 34784917 34785419 -50653061 + L1MA9 LINE L1 5755 6308 -4 1291 178 147 8 chr17 34785594 34785853 -50652627 - AluJb SINE Alu -7 295 1 692 168 92 0 chr17 34786120 34786239 -50652241 - FLAM_A SINE Alu -3 130 1 636 244 69 20 chr17 34787020 34787266 -50651214 + HAL1b LINE L1 403 660 -688 239 54 0 0 chr17 34787827 34787864 -50650616 - MER74B LTR ERVL -585 37 1 741 281 9 9 chr17 34787921 34788149 -50650331 - HERVL74 LTR ERVL -82 5603 5376 697 224 127 16 chr17 34788163 34788408 -50650072 - HERVL74 LTR ERVL -452 5233 4962 1499 204 7 0 chr17 34788409 34788688 -50649792 - AluJo SINE Alu -4 308 28 2266 211 58 31 chr17 34788688 34789079 -50649401 - HERVL74 LTR ERVL -4001 1684 1268 2289 91 0 0 chr17 34789079 34789365 -50649115 - AluSq SINE Alu -23 290 5 2266 211 58 31 chr17 34789365 34789593 -50648887 - HERVL74 LTR ERVL -4417 1268 1048 1227 236 31 45 chr17 34790491 34790651 -50647829 - L1M4 LINE L1 -2251 3895 3734 1636 179 45 14 chr17 34790651 34790942 -50647538 + AluJb SINE Alu 1 300 -12 1227 236 31 45 chr17 34790942 34791204 -50647276 - L1M4 LINE L1 -2412 3734 3479 737 64 36 9 chr17 34791295 34791405 -50647075 - LTR46 LTR ERV1 0 460 348 34399 40 35 2 chr17 34791406 34795900 -50642580 + L1P LINE L1 1 4642 -1504 1673 167 20 36 chr17 34797388 34797693 -50640787 + AluJb SINE Alu 1 300 -12 1772 183 71 27 chr17 34798837 34799275 -50639205 + LTR2B LTR ERV1 34 490 0 180 0 0 0 chr17 34799275 34799295 -50639185 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1061 200 32 60 chr17 34799299 34799549 -50638931 - AluJo SINE Alu -30 282 40 3707 177 50 18 chr17 34799882 34801016 -50637464 + L1MC/D LINE L1 1817 2982 -3558 1311 174 5 0 chr17 34801030 34801248 -50637232 + AluJo SINE Alu 87 305 -7 1749 208 45 60 chr17 34801299 34801722 -50636758 + L1MC/D LINE L1 3029 3457 -3083 2642 171 18 37 chr17 34801722 34802237 -50636243 + MLT1D LTR MaLR 1 505 0 1749 208 45 60 chr17 34802237 34802251 -50636229 + L1MC/D LINE L1 3457 3470 -3070 2333 100 7 7 chr17 34802251 34802561 -50635919 + AluSx SINE Alu 1 310 -2 1749 208 45 60 chr17 34802561 34802816 -50635664 + L1MC/D LINE L1 3470 3711 -2829 1085 141 22 5 chr17 34802817 34803115 -50635365 + LTR46 LTR ERV1 1 356 -104 7645 25 0 0 chr17 34803115 34804216 -50634264 - L1PA3 LINE L1 -2 6153 5052 1990 175 92 46 chr17 34804316 34804616 -50633864 + L1MC/D LINE L1 5501 5786 -1157 1979 129 0 7 chr17 34804616 34804926 -50633554 - AluSq SINE Alu 0 308 1 1990 175 92 46 chr17 34804926 34805296 -50633184 + L1MC/D LINE L1 5786 6200 -743 6785 151 29 75 chr17 34805301 34806843 -50631637 - MER109 Unknown Unknown -211 2221 751 8578 189 260 24 chr17 34806893 34811692 -50626788 + L1P4 LINE L1 833 6964 -635 2173 120 7 3 chr17 34811692 34811992 -50626488 + AluSx SINE Alu 1 301 -11 8578 189 260 24 chr17 34811992 34812367 -50626113 + L1P4 LINE L1 6964 7249 -350 887 273 104 28 chr17 34813722 34814077 -50624403 - L1ME LINE L1 -5662 408 27 282 130 93 0 chr17 34814353 34814407 -50624073 - L1MC5 LINE L1 -1220 6741 6683 1191 182 39 113 chr17 34814585 34814975 -50623505 + MLT1A2 LTR MaLR 1 361 -13 26 50 0 0 chr17 34815529 34815569 -50622911 + AT_rich Low_complexity Low_complexity 1 40 0 987 150 0 14 chr17 34815802 34815949 -50622531 - FRAM SINE Alu -20 156 12 2695 176 38 55 chr17 34816083 34816182 -50622298 - L1MC3 LINE L1 -1 7784 7685 522 0 0 0 chr17 34816182 34816240 -50622240 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 1458 203 0 14 chr17 34816240 34816516 -50621964 - AluJo SINE Alu -32 280 9 2695 176 38 55 chr17 34816516 34816635 -50621845 - L1MC3 LINE L1 -99 7686 7567 2629 51 0 6 chr17 34816635 34816946 -50621534 - AluY SINE Alu -2 309 1 2695 176 38 55 chr17 34816946 34817326 -50621154 - L1MC3 LINE L1 -218 7567 7194 285 207 0 17 chr17 34817330 34817388 -50621092 - MLT1F1 LTR MaLR -466 101 45 491 165 25 25 chr17 34817431 34817552 -50620928 - L1MC3 LINE L1 -746 7039 6919 2074 141 0 10 chr17 34817585 34817889 -50620591 + AluSx SINE Alu 5 305 -7 2690 126 29 79 chr17 34817966 34818484 -50619996 - L1MA9 LINE L1 -196 6116 5625 403 234 32 0 chr17 34818509 34818603 -50619877 - LTR43 LTR ERV1 -505 97 1 1514 162 54 11 chr17 34818621 34818899 -50619581 - AluJo SINE Alu -5 307 18 763 188 21 14 chr17 34818901 34819045 -50619435 - AluJo SINE Alu -163 149 5 295 234 0 53 chr17 34819440 34819534 -50618946 + GA-rich Low_complexity Low_complexity 5 93 0 1038 164 0 0 chr17 34819660 34819825 -50618655 - AluJb SINE Alu -17 295 131 463 278 0 0 chr17 34820609 34820735 -50617745 - L1MA10 LINE L1 -7 6327 6202 435 312 116 0 chr17 34821329 34821518 -50616962 + MLT1J LTR MaLR 102 312 -199 1112 291 18 24 chr17 34821556 34821915 -50616565 + MLT1I LTR MaLR 74 409 0 230 263 25 12 chr17 34821915 34821995 -50616485 + MLT1I-int LTR MaLR 1 81 -1654 294 67 0 0 chr17 34822860 34822905 -50615575 + Alu SINE Alu 256 300 0 3070 140 16 56 chr17 34822955 34823086 -50615394 + L1 LINE L1 4106 4241 -1905 7109 81 28 0 chr17 34823086 34823959 -50614521 - MER11D LTR ERVK 0 897 1 3070 140 16 56 chr17 34823959 34824090 -50614390 + L1 LINE L1 4241 4376 -1770 2138 140 3 0 chr17 34824090 34824397 -50614083 + AluSq SINE Alu 1 308 -5 3070 140 16 56 chr17 34824397 34824754 -50613726 + L1 LINE L1 4376 4701 -1445 34 24 0 0 chr17 34824904 34824945 -50613535 + AT_rich Low_complexity Low_complexity 1 41 0 1790 112 31 42 chr17 34825789 34826075 -50612405 + AluJo SINE Alu 1 283 -29 472 324 138 39 chr17 34826114 34826549 -50611931 + L2 LINE L2 1366 1843 -1471 231 293 98 30 chr17 34826631 34826764 -50611716 - MIR SINE MIR -70 192 51 330 194 38 198 chr17 34826817 34827105 -50611375 + L2 LINE L2 1858 2099 -1215 277 336 94 66 chr17 34827238 34827524 -50610956 + L2 LINE L2 2979 3272 0 1908 217 33 7 chr17 34828900 34829319 -50609161 - MER63B DNA MER1_type 0 436 7 2072 110 39 0 chr17 34829350 34829631 -50608849 + AluSx SINE Alu 1 292 -20 848 227 12 0 chr17 34829758 34829921 -50608559 + FRAM SINE Alu 1 165 -11 872 167 0 0 chr17 34830432 34830558 -50607922 - FRAM SINE Alu -47 129 4 232 363 23 29 chr17 34831385 34831556 -50606924 + MER5A DNA MER1_type 16 185 -4 225 348 0 0 chr17 34831860 34831929 -50606551 - MIR SINE MIR -86 122 54 1120 182 0 0 chr17 34832354 34832513 -50605967 - FRAM SINE Alu -7 159 1 251 286 115 47 chr17 34832640 34833221 -50605259 + L1M4 LINE L1 3808 4428 -1718 261 131 56 0 chr17 34833434 34833541 -50604939 + (TA)n Simple_repeat Simple_repeat 1 113 0 216 129 0 65 chr17 34833541 34833603 -50604877 + (TTTTTA)n Simple_repeat Simple_repeat 2 59 0 316 83 48 12 chr17 34833605 34833689 -50604791 + (TA)n Simple_repeat Simple_repeat 1 87 0 445 285 78 22 chr17 34833864 34834183 -50604297 + L1M4 LINE L1 4943 5279 -867 7534 159 50 5 chr17 34834289 34836679 -50601801 + L1PB1 LINE L1 1566 4069 -2793 1895 189 77 34 chr17 34836680 34837120 -50601360 - LTR2B LTR ERV1 0 490 32 2013 204 7 9 chr17 34837137 34837568 -50600912 + L1PB1 LINE L1 4065 4494 -2368 2968 207 2 5 chr17 34837569 34838192 -50600288 - L1 LINE L1 -903 5243 4623 7582 174 10 10 chr17 34838193 34838806 -50599674 + L1PB1 LINE L1 4500 5111 -1756 254 95 24 0 chr17 34838806 34838848 -50599632 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7582 174 10 10 chr17 34838848 34840252 -50598228 + L1PB1 LINE L1 5111 6519 -348 531 82 0 0 chr17 34840252 34840325 -50598155 + (TA)n Simple_repeat Simple_repeat 2 74 0 7582 174 10 10 chr17 34840325 34840662 -50597818 + L1PB1 LINE L1 6519 6854 -13 568 256 151 4 chr17 34840758 34840996 -50597484 - L1MEc LINE L1 -4280 2116 1844 212 182 45 0 chr17 34842700 34842744 -50595736 + L2 LINE L2 3150 3195 -77 91 19 0 0 chr17 34843030 34843135 -50595345 + AT_rich Low_complexity Low_complexity 1 105 0 21 71 0 0 chr17 34843308 34843350 -50595130 + AT_rich Low_complexity Low_complexity 1 42 0 752 245 37 84 chr17 34843516 34843814 -50594666 - L1MEc LINE L1 -4547 1849 1566 215 158 0 18 chr17 34844871 34844928 -50593552 + GA-rich Low_complexity Low_complexity 4 59 0 210 175 32 32 chr17 34845319 34845382 -50593098 + (GGGTG)n Simple_repeat Simple_repeat 3 65 0 1189 88 0 6 chr17 34845963 34846122 -50592358 - L1MA2 LINE L1 0 6304 6147 216 0 0 0 chr17 34846128 34846152 -50592328 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 11659 142 29 4 chr17 34846152 34849169 -50589311 - L1MA1 LINE L1 -10 7711 4619 8103 162 38 7 chr17 34849160 34850515 -50587965 - L1MA1 LINE L1 -5981 1584 188 * 276 264 0 0 chr17 34850963 34851031 -50587449 - MIR SINE MIR -120 88 21 1783 174 10 7 chr17 34851663 34851961 -50586519 - AluJb SINE Alu -13 299 1 1129 198 69 16 chr17 34852734 34852981 -50585499 + AluJo SINE Alu 42 301 -11 2562 205 64 7 chr17 34853089 34853664 -50584816 - L1MC4 LINE L1 -139 7903 7296 6771 141 71 15 chr17 34853684 34855014 -50583466 + L1PBa LINE L1 1698 3104 -3758 22741 100 7 17 chr17 34855020 34861500 -50576980 + L1PA7 LINE L1 1 6467 -2 9168 208 19 9 chr17 34861475 34862957 -50575523 + L1 LINE L1 2672 4138 -2323 * 2308 84 3 17 chr17 34862957 34863255 -50575225 + AluSp SINE Alu 1 294 -19 9168 208 19 9 chr17 34863255 34863790 -50574690 + L1 LINE L1 4138 4712 -1749 186 71 0 0 chr17 34863790 34863818 -50574662 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 381 204 29 68 chr17 34863823 34863926 -50574554 - L1P LINE L1 -2048 4098 4000 * 382 241 46 0 chr17 34863910 34863997 -50574483 + L1ME LINE L1 5693 5783 -383 2924 102 14 9 chr17 34864007 34864427 -50574053 - L1MA2 LINE L1 -4 6300 5879 2657 145 57 14 chr17 34864427 34864869 -50573611 - LOR1b LTR ERV1 0 461 1 666 121 0 0 chr17 34864869 34864960 -50573520 - LOR1b-int LTR ERV1 0 8120 8030 622 93 12 0 chr17 34864959 34865045 -50573435 - LOR1b-int LTR ERV1 -2056 6064 5978 * 1945 170 170 166 chr17 34865045 34865541 -50572939 + LTR28 LTR ERV1 12 505 -515 2082 110 3 23 chr17 34865541 34865842 -50572638 - AluSg SINE Alu -15 295 1 1945 170 170 166 chr17 34865842 34866350 -50572130 + LTR28 LTR ERV1 505 1020 0 3923 106 16 24 chr17 34866350 34866974 -50571506 - LOR1b-int LTR ERV1 -2658 5462 4844 2029 150 61 22 chr17 34866977 34867404 -50571076 - MER51A LTR ERV1 0 634 193 1603 161 12 0 chr17 34867440 34867688 -50570792 - LOR1b-int LTR ERV1 0 7816 7566 2029 146 9 0 chr17 34867688 34868242 -50570238 + L1P5 LINE L1 4993 5552 -599 1179 174 5 0 chr17 34868245 34868446 -50570034 - L1 LINE L1 -2111 4035 3834 498 135 108 0 chr17 34868446 34868520 -50569960 - AluJ/FLAM SINE Alu -230 82 1 345 150 0 167 chr17 34868520 34868554 -50569926 - L1 LINE L1 -2922 3224 3186 2326 78 0 0 chr17 34868554 34868872 -50569608 + AluY SINE Alu 1 318 0 345 150 0 167 chr17 34868872 34868956 -50569524 - L1 LINE L1 -2960 3186 3125 3965 149 100 0 chr17 34868959 34869601 -50568879 + L1PB1 LINE L1 1464 2169 -5396 1004 129 32 7 chr17 34869603 34869758 -50568722 + MSTA LTR MaLR 1 159 -269 1216 152 0 0 chr17 34869763 34869967 -50568513 + MST-int LTR MaLR 49 252 -1399 3228 109 47 51 chr17 34869967 34870038 -50568442 + LOR1-int LTR ERV1 4661 4731 -3389 2260 111 7 0 chr17 34870038 34870344 -50568136 + AluSp SINE Alu 1 308 -5 3228 109 47 51 chr17 34870344 34870824 -50567656 + LOR1-int LTR ERV1 4731 5210 -2910 256 286 12 12 chr17 34870792 34870876 -50567604 + LOR1-int LTR ERV1 5903 5986 -543 * 5277 172 43 19 chr17 34870878 34872583 -50565897 + L1PB1 LINE L1 5467 7210 -360 269 241 23 0 chr17 34872627 34872714 -50565766 + L1MC4 LINE L1 6615 6703 -1339 1311 81 14 48 chr17 34872716 34872926 -50565554 + L1P5 LINE L1 5309 5511 -640 225 226 0 0 chr17 34872918 34872980 -50565500 + L1MC4 LINE L1 6642 6703 -1339 * 2380 142 6 6 chr17 34872991 34873357 -50565123 + L1PB1 LINE L1 7202 7567 -3 1370 114 24 63 chr17 34873368 34873622 -50564858 + L1MC1 LINE L1 6085 6328 -5 336 343 46 52 chr17 34873626 34873932 -50564548 + HAL1b LINE L1 98 401 -947 1671 148 0 67 chr17 34873945 34874242 -50564238 + AluJo SINE Alu 22 298 -14 473 266 184 37 chr17 34874260 34874614 -50563866 + L1PA12 LINE L1 10 415 -7166 230 296 80 45 chr17 34874718 34874917 -50563563 + L1PA12 LINE L1 1873 2078 -5503 8446 176 50 15 chr17 34876186 34877895 -50560585 + L1PBb LINE L1 403 2263 -3940 4190 111 33 4 chr17 34877883 34878581 -50559899 + L1M1 LINE L1 2520 3238 -4322 * 1686 203 0 0 chr17 34878581 34878871 -50559609 - AluJb SINE Alu -22 290 1 804 212 6 6 chr17 34878874 34879039 -50559441 - L1 LINE L1 -3773 2373 2209 269 26 26 0 chr17 34879042 34879080 -50559400 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 15917 102 6 1 chr17 34879080 34882015 -50556465 - L1PA7 LINE L1 -12 6142 3191 5686 69 31 0 chr17 34882015 34882715 -50555765 - LTR30 LTR ERV1 0 722 1 7381 107 31 4 chr17 34882718 34883748 -50554732 - HERV30 LTR ERV1 -3 8254 7197 * 10898 87 1 13 chr17 34883741 34885154 -50553326 - HERV30 LTR ERV1 -5111 3146 1751 16199 134 11 106 chr17 34885154 34888567 -50549913 - L1PA7 LINE L1 -3057 3089 1 16920 85 18 9 chr17 34888567 34888708 -50549772 - LTR19A-int LTR ERV1 -3080 2506 2368 2500 82 0 0 chr17 34888708 34889013 -50549467 - AluY SINE Alu -6 305 1 16920 85 18 9 chr17 34889013 34890988 -50547492 - LTR19A-int LTR ERV1 -3218 2368 295 405 39 0 0 chr17 34890988 34891039 -50547441 + (GA)n Simple_repeat Simple_repeat 2 52 0 16920 85 18 9 chr17 34891039 34891337 -50547143 - LTR19A-int LTR ERV1 -5291 295 1 2102 109 23 4 chr17 34891337 34891775 -50546705 - LTR19A LTR ERV1 0 486 1 5302 94 13 0 chr17 34891775 34892476 -50546004 - THE1A-int LTR MaLR -870 710 1 2661 100 17 0 chr17 34892476 34892825 -50545655 - THE1A LTR MaLR 0 355 1 1665 167 25 2 chr17 34892825 34893318 -50545162 - L1M2 LINE L1 -725 5566 5065 6929 184 49 7 chr17 34894468 34894662 -50543818 - L1P5 LINE L1 -643 5513 5329 201 74 0 0 chr17 34894662 34894689 -50543791 + (TTG)n Simple_repeat Simple_repeat 1 27 0 6929 184 49 7 chr17 34894689 34895546 -50542934 - L1P5 LINE L1 -827 5329 4368 183 80 0 0 chr17 34895546 34895571 -50542909 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 6929 184 49 7 chr17 34895571 34896081 -50542399 - L1P5 LINE L1 -1788 4368 3881 2779 151 52 23 chr17 34896864 34897381 -50541099 - L1MB7 LINE L1 -2 6182 5651 1549 189 36 17 chr17 34897410 34897711 -50540769 - AluJo SINE Alu -5 307 1 9028 209 38 33 chr17 34897712 34898426 -50540054 - L1MB7 LINE L1 -944 5202 4493 1914 166 0 7 chr17 34898426 34898721 -50539759 - AluJb SINE Alu -19 293 1 9028 209 38 33 chr17 34898721 34900311 -50538169 - L1MB7 LINE L1 -1653 4493 2885 1287 183 133 76 chr17 34900311 34900678 -50537802 - MLT1B LTR MaLR 0 390 3 1916 110 51 0 chr17 34901315 34901569 -50536911 - AluSg SINE Alu -43 267 1 339 111 0 0 chr17 34901670 34901724 -50536756 + MADE1 DNA Mariner 27 80 0 560 173 20 0 chr17 34901850 34901974 -50536506 + L1PB1 LINE L1 5660 5790 -361 197 208 0 19 chr17 34901974 34902027 -50536453 + (TATG)n Simple_repeat Simple_repeat 2 53 0 241 174 0 0 chr17 34902029 34902075 -50536405 - LTR66 LTR ERVL -171 439 394 276 149 0 0 chr17 34902075 34902122 -50536358 + (TA)n Simple_repeat Simple_repeat 1 47 0 2752 88 3 24 chr17 34902122 34902499 -50535981 + L1PB1 LINE L1 5782 6150 -1 365 237 93 34 chr17 34902588 34902706 -50535774 - MER5A DNA MER1_type -56 133 9 230 214 18 18 chr17 34902763 34902819 -50535661 + MER5A DNA MER1_type 120 175 -14 385 218 38 45 chr17 34902875 34902895 -50535585 - LTR33 LTR ERVL -9 512 493 1068 202 202 35 chr17 34902895 34903267 -50535213 + MER57B LTR ERV1 1 434 0 385 218 38 45 chr17 34903267 34903379 -50535101 - LTR33 LTR ERVL -28 493 381 740 268 84 23 chr17 34903454 34903715 -50534765 - LTR33 LTR ERVL -242 279 3 1238 185 63 119 chr17 34903934 34904312 -50534168 + MER57A LTR ERV1 43 399 -4 1822 312 126 24 chr17 34904696 34905856 -50532624 - HERVL LTR ERVL -2056 3598 2558 1318 176 123 11 chr17 34905856 34906117 -50532363 - AluSx SINE Alu -22 290 1 1822 312 126 24 chr17 34906117 34906954 -50531526 - HERVL LTR ERVL -3096 2558 1359 418 233 108 16 chr17 34906958 34907087 -50531393 + MER96 DNA MER1_type? 21 161 -14 464 227 10 0 chr17 34907326 34907423 -50531057 - MER5A DNA MER1_type -83 106 9 11803 36 6 0 chr17 34907768 34909934 -50528546 - L1PA4 LINE L1 0 6155 3977 3431 127 77 74 chr17 34909934 34911233 -50527247 + pTR5 LTR ERV1 66 2436 -2 30141 54 46 1 chr17 34911233 34915042 -50523438 - L1P LINE L1 -2166 3980 1 225 0 0 0 chr17 34915629 34915654 -50522826 + (TG)n Simple_repeat Simple_repeat 2 26 0 799 294 102 50 chr17 34916204 34917367 -50521113 - L1MC4a LINE L1 -808 5338 4632 1972 148 0 10 chr17 34917367 34917665 -50520815 - AluJb SINE Alu -17 295 1 799 294 102 50 chr17 34917665 34917957 -50520523 - L1MC4a LINE L1 -1514 4632 4357 319 214 51 10 chr17 34918238 34918336 -50520144 - HAL1 LINE L1 -856 1651 1550 1089 134 4 121 chr17 34918543 34918774 -50519706 + MER20 DNA MER1_type 16 219 0 468 266 125 11 chr17 34919135 34919496 -50518984 - HAL1b LINE L1 -26 1322 921 891 261 97 18 chr17 34919985 34920315 -50518165 - HAL1b LINE L1 -548 800 445 827 159 0 181 chr17 34920319 34920590 -50517890 + L1MEc LINE L1 42 263 -6133 2122 137 0 0 chr17 34920682 34920974 -50517506 - AluSx SINE Alu -16 296 5 1830 172 33 7 chr17 34921663 34921843 -50516637 - AluJo SINE Alu -2 310 117 267 103 0 0 chr17 34921843 34921882 -50516598 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1830 172 33 7 chr17 34921882 34922003 -50516477 - AluJo SINE Alu -195 117 1 25 0 0 0 chr17 34923927 34923952 -50514528 + AT_rich Low_complexity Low_complexity 1 25 0 742 199 11 52 chr17 34924073 34924264 -50514216 + pTR5 LTR ERV1 742 924 -1514 451 193 12 0 chr17 34924367 34924450 -50514030 + AluJo SINE Alu 72 155 -157 849 149 8 0 chr17 34924456 34924577 -50513903 - FLAM_C SINE Alu -21 122 1 572 258 89 4 chr17 34924577 34924825 -50513655 - L1M4 LINE L1 -946 5200 4932 197 32 0 32 chr17 34925222 34925253 -50513227 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1947 103 50 4 chr17 34925258 34925519 -50512961 - AluSx SINE Alu -37 275 3 2115 126 45 34 chr17 34927419 34927776 -50510704 + THE1B LTR MaLR 1 361 -3 1071 270 75 137 chr17 34928807 34929166 -50509314 - MER1B DNA MER1_type 0 337 1 180 308 77 48 chr17 34929309 34929413 -50509067 + MIR SINE MIR 4 110 -152 2210 110 0 0 chr17 34929622 34929921 -50508559 - AluSq SINE Alu -14 299 1 372 212 44 9 chr17 34929921 34930047 -50508433 + L1ME3A LINE L1 5834 5963 -207 21 0 0 0 chr17 34930240 34930261 -50508219 + AT_rich Low_complexity Low_complexity 1 21 0 252 256 139 23 chr17 34930633 34930762 -50507718 - L1ME4a LINE L1 -15 6106 5963 180 0 0 0 chr17 34930951 34930971 -50507509 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2324 97 0 0 chr17 34930974 34931263 -50507217 - AluSx SINE Alu -23 289 1 933 257 102 35 chr17 34931549 34931981 -50506499 + HAL1 LINE L1 1752 2212 -295 1147 135 0 0 chr17 34932000 34932156 -50506324 + AluSx SINE Alu 1 156 -156 342 0 0 0 chr17 34932467 34932505 -50505975 + (CA)n Simple_repeat Simple_repeat 1 38 0 1092 168 24 39 chr17 34934832 34935040 -50503440 + AluJo SINE Alu 82 286 -26 1787 191 52 3 chr17 34935104 34935449 -50503031 + MLT1A1 LTR MaLR 4 365 0 331 246 14 0 chr17 34935639 34935708 -50502772 + L1MEc LINE L1 246 315 -6292 323 258 75 30 chr17 34935719 34935930 -50502550 + L1MEc LINE L1 1359 1740 -4867 1756 167 27 10 chr17 34935980 34936274 -50502206 - AluJo SINE Alu -9 303 5 584 197 17 101 chr17 34936284 34936462 -50502018 - MER89-int LTR ERV1 -2512 4289 4127 1993 105 0 0 chr17 34936465 34936722 -50501758 + AluSx SINE Alu 54 310 -2 2639 46 3 0 chr17 34936724 34937030 -50501450 + AluY SINE Alu 3 309 -2 3247 242 53 62 chr17 34937039 34937752 -50500728 - MER89-int LTR ERV1 -3443 3358 2641 2478 34 14 14 chr17 34937752 34938048 -50500432 - AluY SINE Alu -15 296 1 3247 242 53 62 chr17 34938048 34938438 -50500042 - MER89-int LTR ERV1 -4160 2641 110 7339 200 83 92 chr17 34938457 34939874 -50498606 - MER89-int LTR ERV1 -4258 2543 1108 338 87 0 0 chr17 34939874 34939920 -50498560 - MADE1 DNA Mariner -34 46 1 7339 200 83 92 chr17 34939920 34940732 -50497748 - MER89-int LTR ERV1 -5693 1108 290 1957 209 19 8 chr17 34941050 34941501 -50496979 - MER89 LTR ERV1 -4 555 1 3053 211 32 38 chr17 34941501 34941595 -50496885 + L1ME1 LINE L1 5026 5119 -1047 2103 120 3 3 chr17 34941595 34941894 -50496586 - AluSx SINE Alu -13 299 1 3053 211 32 38 chr17 34941894 34941988 -50496492 + L1ME1 LINE L1 5119 5212 -954 1186 98 21 36 chr17 34941988 34942182 -50496298 + L1PA11 LINE L1 5984 6174 0 3053 211 32 38 chr17 34942182 34942899 -50495581 + L1ME1 LINE L1 5212 5919 -247 2038 174 93 19 chr17 34942946 34943452 -50495028 + Tigger7 DNA MER2_type 2 2486 -1 1407 95 9 81 chr17 34943601 34943823 -50494657 - AluSx SINE Alu -106 206 1 239 245 21 53 chr17 34944511 34944605 -50493875 + LTR31 LTR ERV1 450 540 -79 191 36 36 0 chr17 34945610 34945638 -50492842 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1583 154 6 69 chr17 34947338 34947466 -50491014 + AluJo SINE Alu 1 135 -177 2014 129 0 4 chr17 34947466 34947773 -50490707 - AluSg SINE Alu 0 306 1 1583 154 6 69 chr17 34947773 34947961 -50490519 + AluJo SINE Alu 135 298 -14 352 0 42 0 chr17 34948433 34948481 -50489999 + (TC)n Simple_repeat Simple_repeat 1 50 0 2376 84 0 22 chr17 34948573 34948884 -50489596 - AluY SINE Alu -7 304 1 699 208 72 86 chr17 34949710 34949958 -50488522 + L1MC4 LINE L1 7259 7575 -467 794 159 0 15 chr17 34949958 34950090 -50488390 + FLAM_A SINE Alu 4 133 0 699 208 72 86 chr17 34950090 34950231 -50488249 + L1MC4 LINE L1 7575 7716 -326 581 276 51 12 chr17 34950231 34950525 -50487955 + LTR16B LTR ERVL 12 350 -114 1027 283 11 34 chr17 34950534 34950884 -50487596 + HERV16 LTR ERVL 1086 1427 -3569 3835 314 74 22 chr17 34950931 34953094 -50485386 + HERV16 LTR ERVL 1567 3827 -1658 913 191 0 0 chr17 34953096 34953248 -50485232 + FRAM SINE Alu 1 146 -30 198 103 0 0 chr17 34953255 34953284 -50485196 + (GAA)n Simple_repeat Simple_repeat 2 30 0 7092 58 7 0 chr17 34953299 34954271 -50484209 + L1PA7 LINE L1 5168 6146 -8 2254 331 25 12 chr17 34954335 34955309 -50483171 + HERV16 LTR ERVL 3843 4828 -826 341 339 6 33 chr17 34955433 34955781 -50482699 + HERV16 LTR ERVL 4555 5332 -153 1959 149 27 0 chr17 34955901 34956196 -50482284 + AluSx SINE Alu 1 303 -9 1298 271 51 15 chr17 34956205 34956614 -50481866 + LTR16B LTR ERVL 1 424 -40 842 222 91 49 chr17 34956648 34956845 -50481635 + L1MC4 LINE L1 7700 7918 -124 237 65 0 0 chr17 34956845 34956876 -50481604 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 842 222 91 49 chr17 34956876 34957007 -50481473 + L1MC4 LINE L1 7918 8042 0 5802 57 16 51 chr17 34957023 34957842 -50480638 + L1PA13 LINE L1 5356 6145 -18 2167 148 120 5 chr17 34957912 34958296 -50480184 + MSTA LTR MaLR 1 428 0 2008 169 20 31 chr17 34958472 34958863 -50479617 - MLT1B LTR MaLR -3 387 1 1815 167 6 22 chr17 34959107 34959419 -50479061 + AluJb SINE Alu 1 307 -5 1812 169 31 0 chr17 34959895 34960185 -50478295 + AluSx SINE Alu 3 301 -11 1523 229 46 8 chr17 34960444 34960816 -50477664 - MLT1C LTR MaLR 0 467 82 194 293 0 0 chr17 34961200 34961258 -50477222 - MIR SINE MIR -54 208 151 1338 250 135 46 chr17 34961285 34961907 -50476573 - L1ME3A LINE L1 -15 6155 5475 1793 133 0 56 chr17 34961907 34962230 -50476250 - AluJo SINE Alu -7 305 1 2334 129 2 77 chr17 34962255 34962379 -50476101 - L1PB3 LINE L1 -20 6134 6011 963 208 54 82 chr17 34962379 34962827 -50475653 - L1PA11 LINE L1 -162 6012 5326 1306 182 0 4 chr17 34962827 34963052 -50475428 - AluJo SINE Alu -4 308 85 1077 220 42 132 chr17 34963053 34963675 -50474805 - L1ME3A LINE L1 -888 5258 4693 756 165 0 8 chr17 34963697 34963818 -50474662 - FLAM_C SINE Alu -22 121 2 928 262 92 22 chr17 34963820 34964348 -50474132 - L1ME3A LINE L1 -1436 4710 4142 3933 151 29 80 chr17 34964414 34964860 -50473620 - L1MA7 LINE L1 -2 6181 5924 1825 146 32 14 chr17 34964860 34965141 -50473339 - AluSx SINE Alu -26 286 1 3933 151 29 80 chr17 34965141 34965697 -50472783 - L1MA7 LINE L1 -259 5924 5341 643 162 147 0 chr17 34965696 34965832 -50472648 + L1 LINE L1 3805 3960 -2186 * 227 171 0 0 chr17 34965854 34965895 -50472585 + GA-rich Low_complexity Low_complexity 2 42 0 1484 224 90 61 chr17 34965896 34966080 -50472400 + L1 LINE L1 3880 4057 -2089 1716 163 69 107 chr17 34966080 34966321 -50472159 - MSTB1 LTR MaLR 0 432 214 1711 181 0 27 chr17 34966321 34966620 -50471860 + AluJo SINE Alu 5 295 -17 1716 163 69 107 chr17 34966620 34966827 -50471653 - MSTB1 LTR MaLR -218 214 1 1484 224 90 61 chr17 34966827 34967351 -50471129 + L1 LINE L1 4057 4609 -1537 44350 46 1 4 chr17 34967355 34972021 -50466459 + L1PA4 LINE L1 1 4650 -1505 8236 82 7 8 chr17 34972021 34973094 -50465386 - MER11C LTR ERVK 0 1071 1 44350 46 1 4 chr17 34973094 34974597 -50463883 + L1PA4 LINE L1 4650 6155 0 1009 201 126 31 chr17 34974655 34974909 -50463571 + AluJo SINE Alu 21 298 -14 189 0 0 0 chr17 34974932 34974953 -50463527 + (A)n Simple_repeat Simple_repeat 1 21 0 1506 114 36 293 chr17 34975021 34975094 -50463386 + L1 LINE L1 4705 4795 -1351 269 31 0 0 chr17 34975094 34975126 -50463354 + U2 snRNA snRNA 1 32 -156 1506 114 36 293 chr17 34975126 34975831 -50462649 + L1 LINE L1 4795 5306 -840 291 111 0 0 chr17 34975848 34975893 -50462587 + LOR1a LTR ERV1 239 283 -214 952 139 377 9 chr17 34975982 34976197 -50462283 + AluJo SINE Alu 11 304 -8 225 0 0 0 chr17 34976271 34976296 -50462184 + (TCTCCC)n Simple_repeat Simple_repeat 1 25 0 9958 42 14 131 chr17 34976301 34977836 -50460644 + SVA Other Other 32 1386 0 1137 157 25 15 chr17 34980027 34980224 -50458256 + L1PB4 LINE L1 5951 6149 -7 29 0 0 0 chr17 34980249 34980278 -50458202 + AT_rich Low_complexity Low_complexity 1 29 0 1694 261 78 2 chr17 34981632 34982195 -50456285 - L1M4 LINE L1 -1965 4181 3576 681 124 177 0 chr17 34982204 34982317 -50456163 + AluJb SINE Alu 2 134 -178 1014 108 7 0 chr17 34982430 34982569 -50455911 + AluJb SINE Alu 167 306 -6 489 182 25 119 chr17 34982578 34982737 -50455743 - L1M4 LINE L1 -2576 3570 3427 1319 133 13 49 chr17 34983621 34983846 -50454634 + AluJo SINE Alu 85 301 -11 939 279 81 70 chr17 34984604 34985121 -50453359 + MLT1K LTR MaLR 23 545 -43 1045 199 61 132 chr17 34986043 34986469 -50452011 + MSTD LTR MaLR 1 396 0 415 273 147 4 chr17 34986472 34986661 -50451819 + MIR SINE MIR 30 249 -13 2348 95 0 19 chr17 34986708 34987024 -50451456 + AluSg SINE Alu 1 310 0 770 201 72 31 chr17 34987545 34987770 -50450710 + MIR SINE MIR 1 240 -22 283 222 167 22 chr17 34987885 34987975 -50450505 + MER5A DNA MER1_type 81 183 -6 193 125 0 0 chr17 34989012 34989044 -50449436 + L2 LINE L2 3024 3055 -217 571 254 155 68 chr17 34989677 34989925 -50448555 + MLT1J2 LTR MaLR 47 337 -113 2331 84 0 7 chr17 34989925 34990222 -50448258 + AluSc SINE Alu 1 295 -14 571 254 155 68 chr17 34990222 34990327 -50448153 + MLT1J2 LTR MaLR 337 431 -19 2396 96 0 6 chr17 34990716 34991029 -50447451 + AluSx SINE Alu 1 311 -1 194 0 0 37 chr17 34991292 34991319 -50447161 + (CTTG)n Simple_repeat Simple_repeat 3 28 0 209 318 131 0 chr17 34991782 34991889 -50446591 + MIR SINE MIR 132 252 -10 863 252 26 52 chr17 34992410 34992720 -50445760 + L1MC5 LINE L1 6933 7234 -727 500 222 215 0 chr17 34992727 34992871 -50445609 + MER5B DNA MER1_type 3 177 -1 615 284 41 11 chr17 34993114 34993385 -50445095 + L1MC5 LINE L1 7306 7584 -377 186 133 0 0 chr17 34993429 34993459 -50445021 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 796 167 0 8 chr17 34993535 34993661 -50444819 + FLAM_C SINE Alu 1 125 -8 1336 144 0 42 chr17 34993683 34993898 -50444582 + AluJo SINE Alu 1 206 -106 1126 174 0 46 chr17 34994013 34994231 -50444249 + AluJo SINE Alu 85 292 -20 459 195 23 62 chr17 34994239 34994367 -50444113 + L1MC5 LINE L1 7662 7784 -177 358 103 0 128 chr17 34994369 34994447 -50444033 + AluSp/q SINE Alu 235 302 -1 357 195 0 24 chr17 34994494 34994576 -50443904 + L1MC5 LINE L1 7832 7911 -50 222 118 0 0 chr17 34994594 34994628 -50443852 + (TG)n Simple_repeat Simple_repeat 1 34 0 237 351 0 0 chr17 34994938 34995015 -50443465 + MIR SINE MIR 47 123 -139 267 219 0 16 chr17 34995015 34995079 -50443401 - MLT1H1-int LTR MaLR -1300 71 9 1081 258 89 42 chr17 34995096 34995392 -50443088 - MLT1H1 LTR MaLR -13 542 214 2030 103 0 58 chr17 34995392 34995702 -50442778 - AluSq SINE Alu -21 292 1 1081 258 89 42 chr17 34995702 34995903 -50442577 - MLT1H1 LTR MaLR -341 214 24 263 304 201 14 chr17 34995993 34996207 -50442273 + MIR SINE MIR 6 259 -3 1882 161 0 7 chr17 34996593 34996899 -50441581 - AluJo SINE Alu 0 304 1 1852 142 3 46 chr17 34997279 34997582 -50440898 - AluSx SINE Alu -16 296 7 326 283 243 0 chr17 34997837 34997989 -50440491 + MIR SINE MIR 7 195 -67 1335 148 5 31 chr17 34998065 34998288 -50440192 + AluJo SINE Alu 84 300 -12 1707 189 3 12 chr17 34998846 34999168 -50439312 + L1MC1 LINE L1 6015 6333 0 2312 125 0 0 chr17 34999433 34999738 -50438742 + AluSx SINE Alu 1 305 -7 2256 106 30 0 chr17 34999745 35000092 -50438388 + AluSx SINE Alu 1 356 0 323 219 0 0 chr17 35000102 35000166 -50438314 - MER5A DNA MER1_type -86 103 40 301 137 20 0 chr17 35000224 35000275 -50438205 - MER65B LTR ERV1 0 531 480 2103 177 49 12 chr17 35000320 35000726 -50437754 - MER65C LTR ERV1 -39 422 2 428 292 9 0 chr17 35001061 35001174 -50437306 + L2 LINE L2 3139 3252 -20 208 286 0 0 chr17 35001318 35001374 -50437106 - L2 LINE L2 0 3313 3258 333 370 40 12 chr17 35001495 35001746 -50436734 - L2 LINE L2 -568 2746 2489 192 277 99 99 chr17 35001766 35002019 -50436461 - L2 LINE L2 -1024 2290 2038 444 250 0 0 chr17 35002061 35002149 -50436331 + FRAM/FAM SINE Alu 1 88 -97 249 172 52 0 chr17 35002149 35002207 -50436273 + L1MD3 LINE L1 7935 7995 0 215 170 0 57 chr17 35002439 35002492 -50435988 + T-rich Low_complexity Low_complexity 5 54 0 888 262 258 17 chr17 35003049 35003645 -50434835 + HAL1 LINE L1 1754 2493 -14 1941 159 3 7 chr17 35004587 35004888 -50433592 - AluJo SINE Alu -12 300 1 199 0 65 0 chr17 35005420 35005451 -50433029 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 903 177 0 32 chr17 35005451 35005609 -50432871 - AluJb SINE Alu -32 280 128 1955 153 0 0 chr17 35005964 35006239 -50432241 - AluSx SINE Alu -37 275 1 238 273 122 29 chr17 35007289 35007428 -50431052 + MLT1K LTR MaLR 85 236 -352 324 0 0 0 chr17 35007458 35007494 -50430986 + (TC)n Simple_repeat Simple_repeat 1 36 0 698 239 80 32 chr17 35007514 35007765 -50430715 + MLT1K LTR MaLR 319 581 -7 4747 53 28 13 chr17 35007832 35008450 -50430030 - L1PA6 LINE L1 0 6154 5528 7689 47 7 13 chr17 35008450 35009528 -50428952 + L1P2 LINE L1 4411 5476 -678 2156 130 0 9 chr17 35009548 35009863 -50428617 + AluSx SINE Alu 1 312 0 523 163 0 0 chr17 35009768 35009860 -50428620 + AluS SINE Alu 221 398 0 508 58 12 35 chr17 35009860 35009946 -50428534 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 311 286 193 7 chr17 35010342 35010482 -50427998 - MIR SINE MIR -50 212 47 1499 125 0 0 chr17 35011037 35011245 -50427235 - AluSp SINE Alu 0 313 106 445 333 105 9 chr17 35011262 35011481 -50426999 - MIR SINE MIR -2 260 21 451 293 70 8 chr17 35012082 35012324 -50426156 + L2 LINE L2 2804 3060 -212 830 171 18 15 chr17 35012567 35012884 -50425596 + CT-rich Low_complexity Low_complexity 1 318 0 1889 186 0 0 chr17 35012898 35013210 -50425270 - AluJo SINE Alu 0 312 1 2124 168 67 45 chr17 35013595 35013637 -50424843 + MLT1D LTR MaLR 1 41 -464 2419 78 3 0 chr17 35013637 35013933 -50424547 + AluY SINE Alu 1 297 -14 2124 168 67 45 chr17 35013933 35014322 -50424158 + MLT1D LTR MaLR 41 447 -58 2354 107 3 0 chr17 35014322 35014631 -50423849 + AluSx SINE Alu 1 310 -2 2124 168 67 45 chr17 35014631 35014692 -50423788 + MLT1D LTR MaLR 447 505 0 2202 137 3 0 chr17 35015199 35015505 -50422975 + AluSx SINE Alu 1 307 -5 240 245 126 66 chr17 35015605 35015756 -50422724 + L1ME4a LINE L1 5959 6118 -3 1908 168 0 3 chr17 35016891 35017194 -50421286 - AluJb SINE Alu -10 302 1 216 0 0 0 chr17 35017194 35017218 -50421262 + (T)n Simple_repeat Simple_repeat 1 24 0 285 421 0 7 chr17 35017974 35018119 -50420361 + L2 LINE L2 2934 3077 -195 2001 97 3 85 chr17 35018407 35018736 -50419744 + AluSx SINE Alu 2 303 -9 2262 119 0 19 chr17 35018741 35019059 -50419421 + AluSx SINE Alu 1 312 0 563 257 69 6 chr17 35019730 35019905 -50418575 + MIR SINE MIR 13 198 -64 897 254 181 6 chr17 35019909 35020108 -50418372 - LTR16A LTR ERVL 0 450 287 1650 189 24 7 chr17 35020108 35020399 -50418081 - AluJo SINE Alu -6 306 11 897 254 181 6 chr17 35020399 35020530 -50417950 - LTR16A LTR ERVL -163 287 62 272 255 31 20 chr17 35020869 35020967 -50417513 + MIR3 SINE MIR 3 101 -107 1741 168 0 54 chr17 35021464 35021779 -50416701 - AluJo SINE Alu -14 298 1 2355 108 0 3 chr17 35021785 35022092 -50416388 - AluSx SINE Alu -6 306 1 434 159 1 13 chr17 35022118 35022206 -50416274 + MER58 DNA MER1_type 128 2420 0 254 232 93 28 chr17 35022248 35022355 -50416125 + MER5A DNA MER1_type 23 147 -42 1648 142 95 22 chr17 35022584 35022858 -50415622 + AluJo SINE Alu 1 294 -18 819 154 80 6 chr17 35022861 35023023 -50415457 + FAM SINE Alu 1 174 -1 2238 210 72 11 chr17 35023023 35023547 -50414933 + MLT1F1 LTR MaLR 12 567 0 378 290 142 0 chr17 35023885 35024040 -50414440 + MIR3 SINE MIR 20 196 -12 482 211 57 6 chr17 35024076 35024223 -50414257 + MIR SINE MIR 105 259 -3 183 300 38 38 chr17 35024386 35024466 -50414014 - L2 LINE L2 -64 3208 3129 675 290 59 35 chr17 35024531 35024786 -50413694 - MIR SINE MIR 0 262 2 1423 113 44 10 chr17 35024948 35025152 -50413328 + AluSq SINE Alu 84 294 -19 690 129 45 30 chr17 35025164 35025296 -50413184 + FLAM_C SINE Alu 6 139 -4 2950 208 39 47 chr17 35025393 35026134 -50412346 - MER21B LTR ERV1 -124 739 5 1927 142 14 10 chr17 35027010 35027305 -50411175 + AluJo SINE Alu 1 296 -16 2838 79 2 83 chr17 35027319 35027815 -50410665 + MER4C LTR ERV1 10 465 0 305 213 250 0 chr17 35028541 35028649 -50409831 - L3 LINE CR1 -70 1507 1373 649 277 71 25 chr17 35028934 35029216 -50409264 + L3 LINE CR1 1143 1437 -140 242 206 46 86 chr17 35029337 35029473 -50409007 + MLT1G3 LTR MaLR 158 363 -232 1719 186 37 0 chr17 35029578 35029874 -50408606 + AluJo SINE Alu 1 307 -5 654 301 60 34 chr17 35029894 35030246 -50408234 + L1ME4a LINE L1 5312 5672 -449 872 83 0 1 chr17 35030246 35030529 -50407951 + AluSx SINE Alu 1 321 0 255 263 84 0 chr17 35030585 35030680 -50407800 + L1ME4a LINE L1 5727 5829 -292 255 299 162 0 chr17 35030828 35031069 -50407411 + L1ME4a LINE L1 5826 6105 -16 1599 106 0 5 chr17 35031112 35031320 -50407160 - AluSg/x SINE Alu -20 290 84 1558 154 7 48 chr17 35031420 35031713 -50406767 + AluJo SINE Alu 11 291 -21 21 36 0 0 chr17 35032012 35032040 -50406440 + GC_rich Low_complexity Low_complexity 1 28 0 268 319 133 7 chr17 35032504 35032639 -50405841 - MIR SINE MIR -62 200 49 180 0 0 0 chr17 35032661 35032681 -50405799 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2384 59 3 30 chr17 35032683 35032988 -50405492 - AluSc SINE Alu -12 297 1 310 278 52 26 chr17 35033042 35033157 -50405323 + MER5A DNA MER1_type 50 167 -22 2075 116 0 0 chr17 35033281 35033557 -50404923 + AluSx SINE Alu 32 307 -5 180 0 0 0 chr17 35033576 35033596 -50404884 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1806 142 59 0 chr17 35033641 35033929 -50404551 - AluJb SINE Alu -2 310 6 250 286 43 0 chr17 35034032 35034102 -50404378 + MIR SINE MIR 177 249 -13 * 269 176 39 0 chr17 35034068 35034119 -50404361 + L2 LINE L2 3261 3313 0 1032 201 11 185 chr17 35034159 35034514 -50403966 - MLT1B LTR MaLR 0 390 -25 1721 188 3 31 chr17 35034514 35034833 -50403647 + AluJo SINE Alu 1 310 -2 1032 201 11 185 chr17 35034833 35034896 -50403584 - MLT1B LTR MaLR -415 4294967271 37 1443 97 65 0 chr17 35034896 35035112 -50403368 + MER30 DNA MER1_type 1 230 0 1032 201 11 185 chr17 35035112 35035145 -50403335 - MLT1B LTR MaLR -352 38 1 673 338 136 5 chr17 35035145 35035586 -50402894 - L2 LINE L2 -348 2966 2468 251 116 337 35 chr17 35035641 35035727 -50402753 + MIR SINE MIR 116 227 -35 1951 137 0 7 chr17 35035820 35036154 -50402326 - AluSx SINE Alu 0 332 1 575 327 6 0 chr17 35037093 35037258 -50401222 + MIR3 SINE MIR 14 179 -29 212 163 0 0 chr17 35037487 35037530 -50400950 + A-rich Low_complexity Low_complexity 1 43 0 980 126 34 17 chr17 35037844 35038019 -50400461 + MER96B DNA MER1_type? 2 179 -238 200 293 170 0 chr17 35038441 35038547 -50399933 - L2 LINE L2 0 3272 3149 1823 149 0 0 chr17 35038940 35039209 -50399271 - AluSx SINE Alu -4 308 40 2259 120 3 0 chr17 35039411 35039712 -50398768 + AluSx SINE Alu 1 302 -10 2253 91 0 3 chr17 35039772 35040080 -50398400 + AluSx SINE Alu 1 307 0 258 215 62 0 chr17 35040686 35040751 -50397729 + MIR SINE MIR 79 147 -115 979 167 14 76 chr17 35041096 35041306 -50397174 - AluJo SINE Alu -18 294 98 375 307 60 104 chr17 35041441 35041487 -50396993 + MIR SINE MIR 28 74 -188 949 138 0 133 chr17 35041487 35041557 -50396923 - MER5A DNA MER1_type 0 189 111 2112 147 10 0 chr17 35041557 35041864 -50396616 + AluSx SINE Alu 1 310 -2 949 138 0 133 chr17 35041864 35042011 -50396469 - MER5A DNA MER1_type -78 111 1 375 307 60 104 chr17 35042011 35042218 -50396262 + MIR SINE MIR 74 261 -1 273 229 193 0 chr17 35042301 35042384 -50396096 - L2 LINE L2 0 3272 3174 227 288 0 15 chr17 35044503 35044569 -50393911 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 222 253 169 12 chr17 35044665 35044748 -50393732 - MIR3 SINE MIR -98 110 15 222 254 34 0 chr17 35045103 35045162 -50393318 + MIR SINE MIR 60 120 -142 188 250 0 21 chr17 35045263 35045311 -50393169 - L2 LINE L2 -59 3254 3208 2279 100 0 0 chr17 35045365 35045669 -50392811 + AluSg SINE Alu 1 304 0 186 189 0 0 chr17 35045857 35045894 -50392586 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 296 47 0 23 chr17 35046129 35046172 -50392308 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 493 323 35 25 chr17 35048101 35048299 -50390181 - MIR SINE MIR -48 214 15 1037 318 73 13 chr17 35048542 35048842 -50389638 + L3 LINE CR1 1084 1424 -153 2215 120 0 0 chr17 35048842 35049184 -50389296 - AluSg SINE Alu 0 342 1 1037 318 73 13 chr17 35049184 35049345 -50389135 + L3 LINE CR1 1424 1574 -3 2075 116 3 11 chr17 35049936 35050220 -50388260 + AluSx SINE Alu 1 282 -30 2283 88 7 7 chr17 35050455 35050749 -50387731 - AluSc SINE Alu -15 294 1 423 240 40 0 chr17 35050814 35050914 -50387566 + MER103 DNA DNA 1 104 -62 468 243 110 0 chr17 35051395 35051495 -50386985 - MER5B DNA MER1_type 0 178 58 684 175 16 74 chr17 35051495 35051618 -50386862 + MER5B DNA MER1_type 1 111 -67 1948 139 9 35 chr17 35051618 35051935 -50386545 - AluJo SINE Alu -3 309 1 684 175 16 74 chr17 35051935 35052000 -50386480 + MER5B DNA MER1_type 111 178 0 468 243 110 0 chr17 35052000 35052035 -50386445 - MER5B DNA MER1_type -120 58 28 2563 58 0 0 chr17 35052053 35052346 -50386134 - AluY SINE Alu -18 293 1 208 140 60 60 chr17 35052346 35052391 -50386089 - MER5B DNA MER1_type -132 46 2 813 198 0 39 chr17 35052398 35052580 -50385900 - MER5A DNA MER1_type -1 188 14 2429 84 3 0 chr17 35052768 35053065 -50385415 + AluSx SINE Alu 1 298 -14 325 222 78 0 chr17 35053408 35053498 -50384982 - L2 LINE L2 -16 3297 3201 1643 229 25 71 chr17 35053516 35053659 -50384821 + L1MD2 LINE L1 4252 4400 -1746 2123 143 7 0 chr17 35053659 35053960 -50384520 + AluSx SINE Alu 1 303 -9 2240 90 4 0 chr17 35053961 35054272 -50384208 + AluY SINE Alu 1 312 0 1643 229 25 71 chr17 35054272 35054758 -50383722 + L1MD2 LINE L1 4399 4855 -1291 1065 149 0 28 chr17 35054758 35054939 -50383541 - AluJ SINE Alu -17 295 120 2105 84 94 7 chr17 35054954 35055240 -50383240 - AluSp SINE Alu -2 311 1 2053 89 22 0 chr17 35055241 35055512 -50382968 - AluSq SINE Alu -36 277 1 840 100 0 18 chr17 35055514 35055624 -50382856 - AluJ SINE Alu -181 131 24 4086 189 60 23 chr17 35055626 35056075 -50382405 + L1MD2 LINE L1 4849 5280 -1079 1829 152 0 37 chr17 35056075 35056371 -50382109 + AluJb SINE Alu 13 297 -15 2438 88 3 0 chr17 35056371 35056665 -50381815 + AluSp SINE Alu 1 296 -17 4086 189 60 23 chr17 35056665 35057170 -50381310 + L1MD2 LINE L1 5280 5921 -438 2414 106 0 0 chr17 35057170 35057481 -50380999 + AluSx SINE Alu 1 311 -1 4086 189 60 23 chr17 35057481 35057811 -50380669 + L1MD2 LINE L1 5921 6237 -122 841 128 0 24 chr17 35057814 35057939 -50380541 - FLAM_A SINE Alu -1 141 20 288 216 137 49 chr17 35057948 35058050 -50380430 + L1MD2 LINE L1 6228 6338 -21 180 0 0 0 chr17 35058059 35058079 -50380401 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2184 136 0 0 chr17 35058196 35058491 -50379989 + AluSx SINE Alu 1 295 -17 627 201 151 0 chr17 35058612 35058771 -50379709 + MER5A DNA MER1_type 7 189 0 307 284 49 0 chr17 35058908 35059010 -50379470 - MIR SINE MIR -79 183 77 350 265 109 41 chr17 35059170 35059317 -50379163 + MER5B DNA MER1_type 22 178 0 198 296 0 0 chr17 35060046 35060090 -50378390 + MIR SINE MIR 29 72 -190 258 243 54 0 chr17 35061106 35061180 -50377300 - MER3 DNA MER1_type -131 78 1 206 247 183 3 chr17 35061722 35061854 -50376626 - MIR SINE MIR -21 187 31 3783 116 8 0 chr17 35063720 35064236 -50374244 + MER1A DNA MER1_type 1 520 -9 192 244 0 0 chr17 35064251 35064292 -50374188 - L3 LINE CR1 -11 1566 1526 * 339 266 149 0 chr17 35064261 35064394 -50374086 - MIR SINE MIR -25 183 16 753 228 16 36 chr17 35064492 35064685 -50373795 - MER5A DNA MER1_type 0 189 1 440 252 114 8 chr17 35064895 35065018 -50373462 + MER5A DNA MER1_type 1 136 -53 325 305 126 40 chr17 35065996 35066096 -50372384 - MER5A DNA MER1_type -22 167 48 2122 119 3 0 chr17 35066096 35066398 -50372082 + AluSg SINE Alu 1 303 -7 325 305 126 40 chr17 35066398 35066448 -50372032 - MER5A DNA MER1_type -141 48 4 292 253 33 11 chr17 35066469 35066560 -50371920 + Charlie7 DNA MER1_type 8 100 -2512 2027 129 0 3 chr17 35066674 35066976 -50371504 + AluSx SINE Alu 1 301 -11 359 253 0 33 chr17 35067027 35067118 -50371362 - L1MC5 LINE L1 -36 7925 7838 342 310 191 8 chr17 35067288 35067457 -50371023 - L1ME3A LINE L1 -218 5952 5730 1444 152 130 4 chr17 35067457 35067727 -50370753 - AluJb SINE Alu -8 304 1 342 310 191 8 chr17 35067727 35067786 -50370694 - L1ME3A LINE L1 -440 5730 5683 2134 122 0 0 chr17 35067818 35068130 -50370350 - AluSx SINE Alu 0 312 1 797 245 29 29 chr17 35068182 35068344 -50370136 + MER112 DNA MER1_type 4 169 -91 2099 85 4 4 chr17 35068344 35068648 -50369832 - AluSc SINE Alu 0 304 1 797 245 29 29 chr17 35068648 35068725 -50369755 + MER112 DNA MER1_type 168 244 -16 317 315 65 65 chr17 35069013 35069126 -50369354 - MIR SINE MIR -35 227 115 186 71 0 0 chr17 35069126 35069154 -50369326 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1853 133 0 25 chr17 35069154 35069440 -50369040 - AluSx SINE Alu -33 279 1 317 315 65 65 chr17 35069440 35069525 -50368955 - MIR SINE MIR -145 117 28 800 238 18 6 chr17 35069625 35069789 -50368691 - MER45A DNA AcHobo 0 178 13 626 234 34 120 chr17 35069810 35070160 -50368320 + L2 LINE L2 2948 3267 -5 1776 141 7 23 chr17 35070559 35070687 -50367793 + AluJb SINE Alu 6 135 -177 459 0 0 0 chr17 35070687 35070738 -50367742 + (TA)n Simple_repeat Simple_repeat 2 52 0 1776 141 7 23 chr17 35070738 35070908 -50367572 + AluJb SINE Alu 135 299 -13 444 118 0 0 chr17 35070908 35070976 -50367504 + (GGGA)n Simple_repeat Simple_repeat 1 68 0 230 306 16 0 chr17 35071457 35071519 -50366961 + MIR3 SINE MIR 136 198 -10 181 351 122 0 chr17 35071900 35071974 -50366506 - L2 LINE L2 -64 3208 3126 652 212 36 36 chr17 35071997 35072162 -50366318 + MIR SINE MIR 17 181 -81 31 0 0 0 chr17 35072274 35072305 -50366175 + AT_rich Low_complexity Low_complexity 1 31 0 1759 125 6 51 chr17 35072307 35072620 -50365860 + AluJb SINE Alu 1 299 -13 2058 110 0 23 chr17 35073846 35074155 -50364325 + AluSx SINE Alu 1 302 -10 1365 140 0 22 chr17 35074564 35074786 -50363694 - MER20 DNA MER1_type -2 217 1 245 88 29 0 chr17 35074874 35074908 -50363572 - L2 LINE L2 -16 3256 3222 223 250 208 10 chr17 35074908 35074970 -50363510 - MIR SINE MIR -10 252 138 1765 118 14 44 chr17 35075097 35075394 -50363086 + AluSx SINE Alu 3 290 -22 192 342 120 0 chr17 35075636 35075753 -50362727 - L2 LINE L2 -8 3305 3175 537 272 19 105 chr17 35075986 35076102 -50362378 - MIR SINE MIR -11 251 166 2203 81 0 0 chr17 35076102 35076415 -50362065 + AluY SINE Alu 1 313 0 537 272 19 105 chr17 35076415 35076554 -50361926 - MIR SINE MIR -96 166 17 210 71 0 0 chr17 35076798 35076826 -50361654 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 604 35 0 24 chr17 35076882 35076967 -50361513 + (TTTC)n Simple_repeat Simple_repeat 3 85 0 387 266 139 0 chr17 35077979 35078152 -50360328 - MER117 DNA MER1_type 0 197 1 199 375 50 12 chr17 35078523 35078603 -50359877 + L2 LINE L2 3127 3209 -63 537 298 21 44 chr17 35078737 35079077 -50359403 - MLT1L LTR MaLR -194 421 20 909 205 0 0 chr17 35079282 35079438 -50359042 + FRAM SINE Alu 1 156 -10 368 304 9 18 chr17 35079519 35079631 -50358849 - MIR SINE MIR -62 146 36 424 161 46 11 chr17 35079680 35079767 -50358713 - MLT1F LTR MaLR -11 531 442 872 144 8 0 chr17 35079768 35079900 -50358580 + FLAM_C SINE Alu 1 133 0 1580 145 14 42 chr17 35080053 35080336 -50358144 + AluSx SINE Alu 1 275 -37 2302 91 3 0 chr17 35080631 35080940 -50357540 - AluSx SINE Alu -2 310 1 496 174 23 10 chr17 35081712 35081885 -50356595 - L1ME1 LINE L1 -5 6161 5913 914 169 6 0 chr17 35082081 35082241 -50356239 - AluJb SINE Alu -3 309 149 935 131 0 0 chr17 35082296 35082433 -50356047 + AluJb SINE Alu 1 137 -175 2209 136 19 3 chr17 35082653 35083027 -50355453 - L1MB3 LINE L1 0 6183 5804 639 165 0 0 chr17 35083029 35083132 -50355348 + AluSq/x SINE Alu 3 105 -207 568 286 37 6 chr17 35083170 35083331 -50355149 + MIR3 SINE MIR 3 168 -40 504 313 7 13 chr17 35085353 35085503 -50352977 - MER117 DNA MER1_type -48 149 1 1692 163 0 33 chr17 35085582 35085888 -50352592 + AluJb SINE Alu 1 296 -16 262 235 183 52 chr17 35085888 35086003 -50352477 - MIR3 SINE MIR -46 162 33 2233 78 10 3 chr17 35086030 35086326 -50352154 + AluSx SINE Alu 1 298 -14 1022 150 24 0 chr17 35086328 35086495 -50351985 + AluSg/x SINE Alu 126 296 -14 23 0 0 0 chr17 35087050 35087073 -50351407 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr17 35087183 35087203 -50351277 + (CATATA)n Simple_repeat Simple_repeat 2 21 0 375 311 0 0 chr17 35087203 35087293 -50351187 + L1MC4 LINE L1 6614 6703 -1339 336 213 27 40 chr17 35087242 35087317 -50351163 - L1MCa LINE L1 -4358 2068 1995 * 2147 105 0 0 chr17 35087318 35087603 -50350877 + AluSg SINE Alu 1 285 -25 4521 207 72 41 chr17 35087869 35087943 -50350537 - L1M4 LINE L1 -764 5382 5312 1822 156 3 10 chr17 35087943 35088257 -50350223 + AluJo SINE Alu 1 312 0 4521 207 72 41 chr17 35088257 35088967 -50349513 - L1M4 LINE L1 -834 5312 4626 1705 169 0 17 chr17 35088967 35089263 -50349217 - AluJo SINE Alu -21 291 1 4521 207 72 41 chr17 35089263 35089885 -50348595 - L1M4 LINE L1 -1520 4626 3927 1825 134 7 4 chr17 35089885 35090162 -50348318 + AluSq SINE Alu 1 278 -35 4521 207 72 41 chr17 35090162 35090180 -50348300 - L1M4 LINE L1 -2219 3927 3911 189 0 0 0 chr17 35090185 35090206 -50348274 + (CA)n Simple_repeat Simple_repeat 2 22 0 2145 89 0 0 chr17 35090306 35090586 -50347894 + AluSq SINE Alu 22 301 -12 1116 103 0 0 chr17 35090588 35090743 -50347737 + AluSg/x SINE Alu 133 287 -25 1616 147 99 0 chr17 35090767 35091040 -50347440 - Tigger3(Golem) DNA MER2_type -2724 305 6 624 139 106 15 chr17 35091040 35091186 -50347294 - MER33 DNA MER1_type -250 74 1 185 311 209 22 chr17 35091387 35091664 -50346816 + L2 LINE L2 2333 2661 -653 207 114 0 0 chr17 35092493 35092528 -50345952 + (CGCGG)n Simple_repeat Simple_repeat 1 35 0 420 300 80 0 chr17 35093279 35093429 -50345051 - MIR SINE MIR -51 211 50 795 255 118 5 chr17 35093769 35093981 -50344499 - MIR SINE MIR 0 262 27 2264 82 0 7 chr17 35094129 35094433 -50344047 + AluSp SINE Alu 1 302 -11 816 208 21 31 chr17 35095388 35095580 -50342900 - AluJo SINE Alu 0 312 123 603 202 36 134 chr17 35095581 35095828 -50342652 - L1MC4 LINE L1 -10 8032 7810 1624 40 10 0 chr17 35096012 35096213 -50342267 + L1PA4 LINE L1 5946 6148 -7 32 0 0 0 chr17 35096213 35096245 -50342235 + AT_rich Low_complexity Low_complexity 1 32 0 3209 256 133 42 chr17 35096575 35097087 -50341393 + L2 LINE L2 1313 1777 -1537 2386 61 0 0 chr17 35097087 35097384 -50341096 + AluY SINE Alu 1 297 -14 3209 256 133 42 chr17 35097384 35098173 -50340307 + L2 LINE L2 1777 2733 -581 477 289 64 80 chr17 35098174 35098548 -50339932 + L1MEd LINE L1 22 389 -5730 300 299 130 60 chr17 35098549 35098964 -50339516 + L1MEd LINE L1 487 930 -5189 1442 240 84 0 chr17 35099009 35099484 -50338996 + L1ME3A LINE L1 5651 6165 -5 253 274 17 8 chr17 35099508 35099625 -50338855 + L1MEd LINE L1 995 1112 -5198 589 264 125 16 chr17 35099663 35100102 -50338378 + L1MEd LINE L1 1130 1616 -4513 2043 106 23 3 chr17 35100142 35100443 -50338037 + AluSx SINE Alu 1 307 -5 1391 76 0 5 chr17 35100493 35100678 -50337802 - L1PB1 LINE L1 0 6151 5968 244 273 145 6 chr17 35100703 35100875 -50337605 + L1MEd LINE L1 2114 2309 -3820 2100 127 3 0 chr17 35100875 35101183 -50337297 + AluSq SINE Alu 1 309 -4 1751 159 3 20 chr17 35101190 35101491 -50336989 + AluJb SINE Alu 1 296 -16 221 167 0 37 chr17 35101496 35101550 -50336930 + G-rich Low_complexity Low_complexity 2 53 0 2040 118 3 16 chr17 35101617 35101931 -50336549 + AluSp SINE Alu 1 310 -3 380 129 0 14 chr17 35101931 35102001 -50336479 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 1524 243 152 36 chr17 35102053 35103082 -50335398 + L1MEd LINE L1 2319 3466 -2663 2058 110 3 3 chr17 35103092 35103401 -50335079 + AluSg SINE Alu 1 309 -1 492 171 276 0 chr17 35103523 35103628 -50334852 + AluJo SINE Alu 2 135 -177 21 36 0 0 chr17 35103628 35103656 -50334824 + AT_rich Low_complexity Low_complexity 1 28 0 1674 122 0 8 chr17 35103694 35103940 -50334540 - AluSp SINE Alu -23 290 47 1395 144 107 0 chr17 35103940 35103960 -50334520 + Tigger3(Golem) DNA MER2_type 2738 2754 -275 450 0 0 0 chr17 35103960 35104010 -50334470 + (TG)n Simple_repeat Simple_repeat 1 50 0 1395 144 107 0 chr17 35104010 35104252 -50334228 + Tigger3(Golem) DNA MER2_type 2754 3028 -1 645 201 27 33 chr17 35104252 35104417 -50334063 + Charlie5 DNA MER1_type 2453 2616 0 434 164 27 0 chr17 35104463 35104536 -50333944 + L2 LINE L2 3239 3313 0 2262 85 7 0 chr17 35104797 35105092 -50333388 + AluSg SINE Alu 1 297 -13 325 208 121 45 chr17 35105120 35105256 -50333224 + MIR SINE MIR 3 148 -62 2446 211 21 10 chr17 35105257 35105869 -50332611 - L1M4 LINE L1 -1127 5019 4401 280 234 112 19 chr17 35105878 35105985 -50332495 + MIR SINE MIR 135 251 -11 1030 259 128 20 chr17 35106046 35106727 -50331753 - L2 LINE L2 -2 3311 2552 318 239 112 45 chr17 35108075 35108209 -50330271 - MIR3 SINE MIR -28 180 38 1395 172 83 3 chr17 35108262 35108552 -50329928 - AluSq SINE Alu 0 313 1 830 134 0 8 chr17 35108553 35108680 -50329800 - AluJo/FLAM SINE Alu -186 126 1 280 281 247 0 chr17 35108754 35108843 -50329637 - L2 LINE L2 0 3272 3162 304 265 205 0 chr17 35108928 35109045 -50329435 - MIR SINE MIR -2 260 120 247 315 22 11 chr17 35109085 35109174 -50329306 + MER5A DNA MER1_type 39 128 -61 222 307 160 25 chr17 35109869 35110107 -50328373 + L2 LINE L2 2811 3080 -192 708 171 12 26 chr17 35110193 35110353 -50328127 + MER20 DNA MER1_type 55 206 -13 1666 164 7 10 chr17 35110355 35110648 -50327832 + AluJo SINE Alu 1 292 -20 573 212 111 69 chr17 35110983 35111172 -50327308 - MIR SINE MIR 0 262 66 22 35 0 0 chr17 35111463 35111492 -50326988 + AT_rich Low_complexity Low_complexity 1 29 0 * 242 235 128 19 chr17 35111473 35111567 -50326913 + MIR SINE MIR 14 113 -95 2261 114 50 26 chr17 35111630 35111973 -50326507 - THE1B LTR MaLR -13 351 1 24 0 0 0 chr17 35112002 35112026 -50326454 + AT_rich Low_complexity Low_complexity 1 24 0 499 293 92 0 chr17 35112065 35112229 -50326251 + MIR SINE MIR 84 262 0 909 274 203 5 chr17 35112967 35113372 -50325108 - L2 LINE L2 -4 3309 2825 2062 72 62 14 chr17 35113480 35113770 -50324710 + AluY SINE Alu 1 304 -7 1080 251 116 78 chr17 35113976 35114562 -50323918 - L2 LINE L2 -550 2764 2157 2047 110 0 57 chr17 35114605 35114922 -50323558 - AluSx SINE Alu -13 299 1 386 298 92 0 chr17 35115158 35115299 -50323181 - MIR SINE MIR -81 181 28 627 174 198 32 chr17 35116198 35116452 -50322028 + MER33 DNA MER1_type 1 342 -2282 1734 164 17 10 chr17 35116452 35116751 -50321729 - AluJb SINE Alu -11 301 1 627 174 198 32 chr17 35116751 35116777 -50321703 + MER33 DNA MER1_type 342 362 -1 2402 75 0 3 chr17 35117147 35117454 -50321026 + AluY SINE Alu 1 306 -5 355 216 0 0 chr17 35117775 35117849 -50320631 + MIR SINE MIR 189 262 0 443 261 97 18 chr17 35118204 35118369 -50320111 - MER5B DNA MER1_type 0 178 1 213 39 0 0 chr17 35119544 35119570 -50318910 + (TCC)n Simple_repeat Simple_repeat 2 27 0 221 246 43 43 chr17 35120729 35120798 -50317682 + MIR SINE MIR 2 70 -192 192 260 116 68 chr17 35121307 35121453 -50317027 - L2 LINE L2 -467 2847 2695 259 301 19 10 chr17 35121510 35121613 -50316867 - L2 LINE L2 -735 2579 2476 1858 153 7 26 chr17 35122189 35122496 -50315984 + AluJb SINE Alu 1 301 -11 198 0 0 0 chr17 35123152 35123174 -50315306 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2084 123 0 0 chr17 35123174 35123458 -50315022 - AluSx SINE Alu -25 287 1 507 249 122 16 chr17 35123963 35124152 -50314328 - MLT1L LTR MaLR -8 607 399 2411 103 3 0 chr17 35124176 35124488 -50313992 + AluSp SINE Alu 1 313 0 1867 155 7 3 chr17 35124511 35124801 -50313679 + AluJb SINE Alu 1 291 -21 186 0 88 0 chr17 35124801 35124835 -50313645 + GA-rich Low_complexity Low_complexity 1 37 0 417 258 40 16 chr17 35124974 35125098 -50313382 - MLT1L LTR MaLR -456 159 33 558 290 29 54 chr17 35125185 35125464 -50313016 - L2 LINE L2 -192 3080 2809 687 303 57 35 chr17 35125666 35125894 -50312586 + MIR SINE MIR 13 245 -17 2339 207 106 37 chr17 35126016 35126659 -50311821 - L1MC4 LINE L1 -4 8038 7352 24 0 0 0 chr17 35126983 35127007 -50311473 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 35127593 35127614 -50310866 + AT_rich Low_complexity Low_complexity 1 21 0 735 167 0 30 chr17 35127633 35127765 -50310715 - AluSg/x SINE Alu -1 309 182 547 250 41 58 chr17 35128767 35128939 -50309541 + MIR3 SINE MIR 19 187 -21 515 267 169 25 chr17 35129299 35129659 -50308821 - L2 LINE L2 -5 3308 2804 577 253 102 36 chr17 35129702 35130065 -50308415 - L1MC5 LINE L1 -46 7915 7529 889 137 0 8 chr17 35130446 35130577 -50307903 + FLAM_A SINE Alu 4 133 0 6970 154 36 73 chr17 35131184 35131566 -50306914 + Charlie1a DNA MER1_type 2 396 -2365 1472 175 52 15 chr17 35131566 35131834 -50306646 - AluJo SINE Alu -13 299 22 6970 154 36 73 chr17 35131834 35132960 -50305520 + Charlie1a DNA MER1_type 396 1455 0 1421 100 1 56 chr17 35133326 35133573 -50304907 + L1MA8 LINE L1 5889 6000 -166 885 133 31 61 chr17 35133598 35133794 -50304686 + L1MA8 LINE L1 6097 6286 -5 238 163 0 0 chr17 35134473 35134516 -50303964 - LTR66 LTR ERVL -175 435 393 1983 139 0 3 chr17 35134536 35134823 -50303657 - AluSx SINE Alu -26 286 1 32 43 0 0 chr17 35134831 35134877 -50303603 + AT_rich Low_complexity Low_complexity 1 46 0 990 135 0 0 chr17 35134899 35135040 -50303440 - AluJb SINE Alu -171 141 1 1576 163 48 11 chr17 35135060 35135330 -50303150 - AluJo SINE Alu -22 290 11 1586 100 66 0 chr17 35135430 35135689 -50302791 - L1MB3 LINE L1 -208 5975 5700 1404 230 19 41 chr17 35135688 35136105 -50302375 - L1M4 LINE L1 -2357 3789 3382 * 886 261 65 0 chr17 35136114 35136313 -50302167 + MER58A DNA MER1_type 13 224 0 810 231 32 41 chr17 35136319 35136498 -50301982 - L1M4 LINE L1 -2761 3385 3206 2058 152 0 7 chr17 35136498 35136808 -50301672 - AluJb SINE Alu 0 312 5 810 231 32 41 chr17 35136808 35136951 -50301529 - L1M4 LINE L1 -2940 3206 2946 253 261 51 51 chr17 35137107 35137245 -50301235 - L2 LINE L2 -1477 1837 1700 2085 150 0 0 chr17 35137577 35137870 -50300610 + AluSx SINE Alu 1 293 -19 21 36 0 0 chr17 35138926 35138954 -50299526 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr17 35139299 35139322 -50299158 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 32 0 0 0 chr17 35139568 35139600 -50298880 + AT_rich Low_complexity Low_complexity 1 32 0 653 254 102 50 chr17 35139856 35140379 -50298101 - L2 LINE L2 -1 3312 2707 465 101 29 29 chr17 35140382 35140451 -50298029 - AluSg/x SINE Alu -25 285 217 1480 192 88 108 chr17 35140551 35140694 -50297786 - L2 LINE L2 -933 2381 2237 2196 117 0 16 chr17 35140694 35141011 -50297469 + AluSx SINE Alu 1 312 0 1480 192 88 108 chr17 35141011 35141387 -50297093 - L2 LINE L2 -1077 2237 1872 2266 108 3 0 chr17 35141936 35142233 -50296247 + AluSq SINE Alu 1 298 -15 1991 156 10 0 chr17 35143399 35143707 -50294773 - AluSx SINE Alu -1 311 1 297 240 0 13 chr17 35143718 35143793 -50294687 - L1ME LINE L1 -288 5833 5760 2088 116 27 3 chr17 35144051 35144345 -50294135 - AluSq SINE Alu -12 301 1 1051 167 12 0 chr17 35144410 35144578 -50293902 - AluJo SINE Alu -22 290 121 228 163 0 0 chr17 35144579 35144622 -50293858 + T-rich Low_complexity Low_complexity 1 43 0 743 159 45 0 chr17 35144623 35144755 -50293725 - FLAM_C SINE Alu 0 143 6 504 0 0 0 chr17 35145345 35145401 -50293079 + (TATG)n Simple_repeat Simple_repeat 3 58 0 751 157 0 0 chr17 35145401 35145516 -50292964 - AluJo SINE Alu -186 116 2 1082 205 163 6 chr17 35145637 35145969 -50292511 + HsTC2 DNA Tc2 1515 1898 0 603 255 108 37 chr17 35145971 35146324 -50292156 - L1M2 LINE L1 -2367 3848 3471 322 240 47 115 chr17 35146333 35146525 -50291955 - L1M2 LINE L1 -3767 2448 2270 1306 157 0 57 chr17 35146525 35146755 -50291725 - AluJo SINE Alu -79 233 17 1624 94 0 0 chr17 35147169 35147370 -50291110 - AluSg/x SINE Alu -26 284 84 300 279 133 9 chr17 35147397 35147655 -50290825 - L1M2 LINE L1 -4258 1958 1542 345 269 0 0 chr17 35147668 35147746 -50290734 - L1ME LINE L1 -2206 5602 5525 4049 152 78 1 chr17 35148196 35148889 -50289591 - L1MB3 LINE L1 -3 6180 5435 2717 114 8 0 chr17 35149008 35149360 -50289120 - THE1A LTR MaLR 0 355 1 12918 83 1 2 chr17 35149360 35150941 -50287539 - THE1A-int LTR MaLR 0 1580 1 2560 107 8 30 chr17 35150941 35151304 -50287176 - THE1A LTR MaLR 0 355 1 253 222 16 151 chr17 35152690 35152816 -50285664 - MER20B DNA MER1_type -616 167 59 2107 143 3 0 chr17 35153081 35153389 -50285091 + AluJo SINE Alu 1 309 -3 622 311 79 13 chr17 35153400 35153628 -50284852 + MIR SINE MIR 20 262 0 2198 210 117 25 chr17 35154214 35154729 -50283751 + MER68 LTR ERV1 1 562 0 1888 209 76 0 chr17 35154741 35155243 -50283237 + L1M4 LINE L1 3676 4256 -1890 193 292 267 8 chr17 35155583 35155703 -50282777 + MIR SINE MIR 20 170 -92 650 289 75 99 chr17 35155741 35155783 -50282697 - MLT1J LTR MaLR -46 465 423 1870 134 17 7 chr17 35155783 35156075 -50282405 + AluSx SINE Alu 1 295 -17 650 289 75 99 chr17 35156075 35156290 -50282190 - MLT1J LTR MaLR -88 423 221 2153 95 13 23 chr17 35156290 35156594 -50281886 - AluSx SINE Alu -11 301 1 650 289 75 99 chr17 35156594 35156778 -50281702 - MLT1J LTR MaLR -290 221 34 203 273 18 0 chr17 35157039 35157094 -50281386 + L2 LINE L2 3216 3271 -1 * 442 294 124 13 chr17 35157093 35157246 -50281234 + MIR SINE MIR 20 189 -73 2130 118 6 16 chr17 35157318 35157631 -50280849 + AluSx SINE Alu 1 310 -2 1066 201 47 5 chr17 35157762 35157976 -50280504 + MIR SINE MIR 12 234 -28 411 288 65 22 chr17 35158331 35158451 -50280029 + L2 LINE L2 2815 2947 -366 2208 116 0 7 chr17 35158451 35158754 -50279726 - AluSq SINE Alu -12 301 1 411 288 65 22 chr17 35158754 35158817 -50279663 + L2 LINE L2 2947 3006 -307 332 296 91 0 chr17 35160820 35160952 -50277528 - MIR3 SINE MIR -45 163 20 195 42 0 0 chr17 35161215 35161239 -50277241 + (GGAA)n Simple_repeat Simple_repeat 2 25 0 397 212 120 54 chr17 35161278 35161462 -50277018 - MIR3 SINE MIR -3 205 10 5925 28 5 1 chr17 35161793 35162448 -50276032 - SVA Other Other -8 1378 722 246 163 61 0 chr17 35162633 35162682 -50275798 - MER5A DNA MER1_type -77 112 61 2223 112 44 0 chr17 35162685 35162980 -50275500 - AluSx SINE Alu -4 308 1 2038 149 23 0 chr17 35162986 35163287 -50275193 - AluSx SINE Alu -3 309 2 289 284 0 0 chr17 35163287 35163354 -50275126 - MER5A DNA MER1_type -114 75 9 386 270 60 0 chr17 35163572 35163672 -50274808 + MIR SINE MIR 137 242 -20 1969 162 3 0 chr17 35163833 35164130 -50274350 + AluJo SINE Alu 1 298 -14 32 43 0 0 chr17 35164213 35164259 -50274221 + AT_rich Low_complexity Low_complexity 1 46 0 311 304 56 43 chr17 35165264 35165425 -50273055 + MIR SINE MIR 87 249 -13 231 204 0 0 chr17 35165469 35165518 -50272962 + (CA)n Simple_repeat Simple_repeat 2 50 0 1717 114 2 143 chr17 35165520 35165913 -50272567 - MER47A DNA MER2_type 0 366 29 676 263 78 26 chr17 35166221 35166453 -50272027 + MIR SINE MIR 9 252 -10 235 313 261 0 chr17 35166702 35166817 -50271663 + L2 LINE L2 3128 3272 0 441 337 75 5 chr17 35167748 35167947 -50270533 + MIR SINE MIR 50 262 0 665 234 70 12 chr17 35168345 35168516 -50269964 - MIR SINE MIR -10 252 72 613 260 176 36 chr17 35168546 35168702 -50269778 - L1MC/D LINE L1 -2105 5703 5570 3733 90 7 68 chr17 35168702 35169292 -50269188 - MER41A LTR ERV1 0 554 1 613 260 176 36 chr17 35169292 35169493 -50268987 - L1MC/D LINE L1 -2238 5570 5296 322 324 41 59 chr17 35169525 35169695 -50268785 - L1MC/D LINE L1 -891 5255 5089 226 290 0 14 chr17 35169856 35169925 -50268555 + MIR SINE MIR 23 90 -172 328 320 20 0 chr17 35170048 35170148 -50268332 - MIR SINE MIR -72 136 35 391 227 42 34 chr17 35170376 35170495 -50267985 + MIR SINE MIR 18 137 -71 230 300 146 31 chr17 35170593 35170723 -50267757 + MIR SINE MIR 3 147 -115 759 257 65 34 chr17 35170883 35171135 -50267345 + MLT1J2 LTR MaLR 1 278 -131 1269 147 59 0 chr17 35171135 35171339 -50267141 + MER20 DNA MER1_type 1 216 -3 759 257 65 34 chr17 35171339 35171476 -50267004 + MLT1J2 LTR MaLR 278 409 0 232 306 216 0 chr17 35171479 35171590 -50266890 - MIR SINE MIR -105 157 23 206 302 0 0 chr17 35172853 35172906 -50265574 + L2 LINE L2 3208 3260 -12 322 269 109 8 chr17 35173311 35173430 -50265050 - MIR3 SINE MIR -65 143 13 320 198 0 8 chr17 35173762 35173888 -50264592 + GA-rich Low_complexity Low_complexity 2 126 0 285 259 60 12 chr17 35173920 35174086 -50264394 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 2405 90 3 0 chr17 35174167 35174466 -50264014 + AluSx SINE Alu 1 300 -12 227 301 49 68 chr17 35174601 35174764 -50263716 - MIR SINE MIR -69 193 34 2013 144 10 0 chr17 35175092 35175383 -50263097 - AluJb SINE Alu -18 294 1 220 171 0 0 chr17 35175454 35175489 -50262991 + polypyrimidine Low_complexity Low_complexity 3 37 0 1047 282 85 10 chr17 35175495 35176099 -50262381 - L2 LINE L2 -19 3294 2636 301 323 116 20 chr17 35176304 35176502 -50261978 - MIR SINE MIR -6 256 40 550 310 85 69 chr17 35176586 35176717 -50261763 + L2 LINE L2 2512 2639 -633 1655 171 7 39 chr17 35176717 35177027 -50261453 - AluJo SINE Alu -7 305 6 550 310 85 69 chr17 35177027 35177448 -50261032 + L2 LINE L2 2639 3077 -195 190 286 245 10 chr17 35178661 35178759 -50259721 + MIR3 SINE MIR 6 126 -82 347 287 131 0 chr17 35179287 35179409 -50259071 + MIR3 SINE MIR 20 157 -51 364 298 16 64 chr17 35179417 35179534 -50258946 + MER5A DNA MER1_type 2 125 -64 2390 82 0 3 chr17 35179534 35179826 -50258654 - AluY SINE Alu -20 291 1 364 298 16 64 chr17 35179826 35179881 -50258599 + MER5A DNA MER1_type 125 181 -8 659 277 148 30 chr17 35179995 35180360 -50258120 + L3 LINE CR1 1169 1576 -1 1198 176 0 10 chr17 35181476 35181709 -50256771 + AluJb SINE Alu 109 339 0 495 313 150 30 chr17 35181822 35182189 -50256291 - L3 LINE CR1 -1 1576 1166 883 240 78 16 chr17 35182200 35182590 -50255890 - MLT1J2 LTR MaLR 0 450 9 271 299 19 56 chr17 35182596 35182703 -50255777 - L3 LINE CR1 -425 1152 1050 625 274 0 0 chr17 35182751 35182908 -50255572 - MER63A DNA MER1_type -1 209 53 229 294 44 15 chr17 35182974 35183042 -50255438 - MIR SINE MIR -80 182 113 262 272 123 26 chr17 35183186 35183300 -50255180 + L2 LINE L2 3139 3263 -9 244 298 0 0 chr17 35184404 35184461 -50254019 + polypyrimidine Low_complexity Low_complexity 1 57 0 442 295 54 0 chr17 35184633 35184745 -50253735 + L2 LINE L2 3155 3272 0 2120 155 48 33 chr17 35184914 35185134 -50253346 - MSTA LTR MaLR 0 428 213 2478 76 0 13 chr17 35185134 35185438 -50253042 + AluY SINE Alu 1 300 -11 2276 113 0 10 chr17 35185446 35185747 -50252733 - AluSq SINE Alu -15 298 1 2120 155 48 33 chr17 35185747 35185936 -50252544 - MSTA LTR MaLR -221 207 4 264 261 207 9 chr17 35186256 35186367 -50252113 - MIR3 SINE MIR -67 141 9 237 65 0 0 chr17 35186572 35186603 -50251877 + (TG)n Simple_repeat Simple_repeat 1 31 0 263 309 163 0 chr17 35187105 35187228 -50251252 + MIR3 SINE MIR 66 208 0 1016 240 36 12 chr17 35187405 35187655 -50250825 + MIR SINE MIR 7 262 0 469 298 47 38 chr17 35188554 35188789 -50249691 + L2 LINE L2 2417 2653 -661 1031 260 215 14 chr17 35188796 35189215 -50249265 - MLT1J LTR MaLR 0 511 9 296 325 6 57 chr17 35189245 35189402 -50249078 + L2 LINE L2 2717 2865 -449 824 291 31 14 chr17 35189650 35189939 -50248541 + LTR16C LTR ERVL 198 491 0 845 346 40 52 chr17 35190168 35190486 -50247994 + MERVL LTR ERVL 465 775 -4221 2315 93 0 14 chr17 35190486 35190805 -50247675 + AluSq SINE Alu 1 315 0 845 346 40 52 chr17 35190805 35191063 -50247417 + MERVL LTR ERVL 775 1035 -3961 1651 330 69 33 chr17 35191159 35192230 -50246250 + MERVL LTR ERVL 1311 2420 -3344 987 349 64 32 chr17 35192247 35193122 -50245358 + MERVL LTR ERVL 4378 5280 -205 775 256 99 52 chr17 35193424 35193806 -50244674 + LTR16C LTR ERVL 92 491 0 246 333 0 0 chr17 35193908 35193989 -50244491 + L2 LINE L2 3188 3268 -4 286 319 117 18 chr17 35194842 35195005 -50243475 - MIR SINE MIR -11 251 73 381 345 128 23 chr17 35195882 35196320 -50242160 - L2 LINE L2 -19 3294 2811 562 253 37 131 chr17 35196774 35197050 -50241430 - MER102a DNA MER1_type -1098 319 81 1628 187 29 4 chr17 35197050 35197328 -50241152 + AluJb SINE Alu 13 297 -15 562 253 37 131 chr17 35197328 35197403 -50241077 - MER102a DNA MER1_type -1336 81 1 217 222 48 32 chr17 35197408 35197471 -50241009 - MIR SINE MIR -111 151 88 182 267 27 53 chr17 35198353 35198428 -50240052 + L2 LINE L2 3139 3211 -61 208 244 0 0 chr17 35198558 35198599 -50239881 + MIR SINE MIR 104 144 -64 589 242 170 0 chr17 35198659 35198812 -50239668 + MER5A DNA MER1_type 4 182 -7 183 176 0 0 chr17 35198978 35199012 -50239468 + L2 LINE L2 3279 3312 -1 348 333 54 6 chr17 35199425 35199593 -50238887 - L3 LINE CR1 -19 1558 1383 273 294 90 111 chr17 35199636 35199915 -50238565 - L2 LINE L2 -8 3264 2992 292 257 46 66 chr17 35200161 35200313 -50238167 + L2 LINE L2 2871 3019 -253 2371 109 0 0 chr17 35201278 35201582 -50236898 + AluSc SINE Alu 1 304 -5 1967 153 3 10 chr17 35201650 35201964 -50236516 - AluJb SINE Alu 0 312 1 1113 250 8 32 chr17 35203063 35203315 -50235165 + MIR SINE MIR 17 262 0 1446 195 0 26 chr17 35203333 35203605 -50234875 - AluJo SINE Alu -36 276 12 340 220 69 75 chr17 35203718 35203896 -50234584 + MER20B DNA MER1_type 37 217 -2 248 130 22 0 chr17 35204025 35204071 -50234409 + CT-rich Low_complexity Low_complexity 4 50 0 249 355 91 9 chr17 35204073 35204183 -50234297 - L2 LINE L2 -31 3241 3123 437 210 193 0 chr17 35205298 35205417 -50233063 + MIR SINE MIR 52 193 -69 544 316 54 29 chr17 35206399 35206750 -50231730 - L1ME4a LINE L1 -233 5888 5529 543 231 8 8 chr17 35206806 35206927 -50231553 + MIR3 SINE MIR 67 187 -21 595 291 38 26 chr17 35207248 35207460 -50231020 + MIR SINE MIR 34 246 -16 753 250 41 0 chr17 35208649 35208845 -50229635 + MER58A DNA MER1_type 1 204 -20 301 334 73 42 chr17 35209789 35210125 -50228355 + L2 LINE L2 2709 3053 -219 271 259 37 0 chr17 35210523 35210604 -50227876 + MER20B DNA MER1_type 56 139 -644 2530 74 0 3 chr17 35210724 35211034 -50227446 - AluY SINE Alu 0 311 3 1328 216 92 18 chr17 35211043 35211478 -50227002 + MER20B DNA MER1_type 287 753 -30 338 190 0 13 chr17 35213184 35213263 -50225217 + MER53 DNA DNA 104 181 -8 189 268 0 0 chr17 35213621 35213662 -50224818 - MIR3 SINE MIR -49 159 119 302 347 20 20 chr17 35213921 35214071 -50224409 + L2 LINE L2 2703 2852 -462 240 189 113 0 chr17 35214435 35214488 -50223992 + L2 LINE L2 3234 3292 -21 426 39 0 0 chr17 35214496 35214548 -50223932 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 491 273 0 0 chr17 35214552 35214662 -50223818 + MIR SINE MIR 30 139 -69 240 261 117 127 chr17 35215339 35215765 -50222715 + L2 LINE L2 2822 3243 -29 1915 146 0 0 chr17 35215896 35216171 -50222309 - AluJb SINE Alu -29 283 9 888 156 24 33 chr17 35216308 35216520 -50221960 + Charlie5 DNA MER1_type 2376 2585 -27 693 261 148 5 chr17 35216520 35216723 -50221757 + MIR SINE MIR 31 262 0 328 213 0 0 chr17 35216830 35216891 -50221589 - L2 LINE L2 -3 3310 3250 237 271 29 0 chr17 35216919 35216989 -50221491 - L2 LINE L2 0 3313 3242 656 239 74 32 chr17 35218268 35218463 -50220017 + MIR SINE MIR 3 211 -51 186 200 156 0 chr17 35219094 35219139 -50219341 + L2 LINE L2 3139 3190 -82 735 306 17 44 chr17 35220155 35220449 -50218031 - L3 LINE CR1 -76 1501 1216 262 235 374 18 chr17 35220502 35220668 -50217812 + MIR SINE MIR 28 252 -10 497 263 159 29 chr17 35221460 35221946 -50216534 + MLT1H LTR MaLR 21 555 0 * 799 247 62 54 chr17 35221946 35222297 -50216183 - LTR16C LTR ERVL -30 461 108 3119 215 44 8 chr17 35222476 35223221 -50215259 + MER20B DNA MER1_type 7 778 -5 211 231 58 0 chr17 35223347 35223399 -50215081 - L2 LINE L2 -219 3053 2999 316 244 11 78 chr17 35223500 35223590 -50214890 - MIR SINE MIR -119 143 60 599 289 146 19 chr17 35223656 35223762 -50214718 - L2 LINE L2 -7 3306 3215 1152 160 68 5 chr17 35223762 35223968 -50214512 - MER20B DNA MER1_type 0 219 1 599 289 146 19 chr17 35223968 35224169 -50214311 - L2 LINE L2 -98 3215 2960 930 162 0 0 chr17 35224174 35224353 -50214127 + (CAT)n Simple_repeat Simple_repeat 1 179 0 526 222 79 0 chr17 35224376 35224502 -50213978 - MIR SINE MIR -15 247 112 295 259 175 42 chr17 35224498 35224587 -50213893 - L2 LINE L2 -356 2958 2882 * 2109 120 3 0 chr17 35224587 35224900 -50213580 + AluSq SINE Alu 1 314 0 295 259 175 42 chr17 35224900 35224952 -50213528 - L2 LINE L2 -432 2882 2797 1063 243 58 37 chr17 35224998 35225323 -50213157 + LTR16A LTR ERVL 81 412 -38 1679 290 145 14 chr17 35225364 35226196 -50212284 - L2 LINE L2 -534 2780 1840 413 309 56 6 chr17 35226885 35227047 -50211433 - MIR SINE MIR -61 201 32 234 271 29 14 chr17 35227057 35227127 -50211353 + MIR3 SINE MIR 116 186 -22 185 204 48 117 chr17 35227939 35228042 -50210438 - L2 LINE L2 -155 3117 3022 249 264 44 55 chr17 35228248 35228339 -50210141 - MIR3 SINE MIR 0 208 119 311 208 22 49 chr17 35228609 35228720 -50209760 - MIR SINE MIR -62 146 76 183 349 0 0 chr17 35229036 35229099 -50209381 - MIR SINE MIR -90 172 110 523 294 128 9 chr17 35229137 35229355 -50209125 + MIR SINE MIR 18 261 -1 256 286 152 0 chr17 35229552 35229664 -50208816 + MIR SINE MIR 81 209 -53 223 317 12 0 chr17 35230293 35230375 -50208105 + (TTCA)n Simple_repeat Simple_repeat 2 84 0 268 378 84 19 chr17 35230671 35230933 -50207547 + L2 LINE L2 2600 2878 -436 252 351 80 53 chr17 35230993 35231295 -50207185 + L2 LINE L2 2931 3240 -32 406 244 149 21 chr17 35231401 35231604 -50206876 + MIR SINE MIR 33 262 0 322 315 54 34 chr17 35231608 35231757 -50206723 + MIR SINE MIR 52 203 -59 192 318 63 0 chr17 35232235 35232298 -50206182 - L2 LINE L2 -35 3237 3171 473 261 48 53 chr17 35232553 35232741 -50205739 - MIR SINE MIR -56 206 20 313 312 76 13 chr17 35233301 35233458 -50205022 + MIR3 SINE MIR 34 200 -8 185 264 154 45 chr17 35233649 35233759 -50204721 + MIR SINE MIR 32 153 -109 215 310 0 23 chr17 35234530 35234617 -50203863 + G-rich Low_complexity Low_complexity 5 89 0 1628 184 74 0 chr17 35234934 35235217 -50203263 - AluJb SINE Alu -8 304 1 614 299 51 0 chr17 35235511 35235725 -50202755 + MIR SINE MIR 31 255 -7 212 296 0 0 chr17 35235733 35235777 -50202703 + C-rich Low_complexity Low_complexity 3 46 0 273 158 53 18 chr17 35236381 35236438 -50202042 - MIR3 SINE MIR -53 155 97 453 223 32 45 chr17 35236580 35236737 -50201743 + L1ME3A LINE L1 6016 6170 0 182 318 34 23 chr17 35237242 35237330 -50201150 - MIR SINE MIR -87 121 33 182 286 14 43 chr17 35237821 35237891 -50200589 - L2 LINE L2 -4 3309 3242 2214 129 7 0 chr17 35238390 35238692 -50199788 + AluSg SINE Alu 1 304 -6 537 272 171 42 chr17 35238883 35239170 -50199310 + L2 LINE L2 2990 3313 0 201 74 0 0 chr17 35239332 35239359 -50199121 + (CA)n Simple_repeat Simple_repeat 1 27 0 438 231 74 8 chr17 35239421 35239542 -50198938 + MIR SINE MIR 134 262 0 272 171 46 0 chr17 35239544 35239594 -50198886 - MIR SINE MIR -85 123 71 522 299 58 33 chr17 35240280 35240493 -50197987 + MIR SINE MIR 35 256 -6 700 335 10 0 chr17 35241072 35241266 -50197214 + MER91A DNA MER1_type 1 196 0 224 324 99 9 chr17 35241420 35241531 -50196949 + L2 LINE L2 3152 3272 0 239 270 0 72 chr17 35241542 35241653 -50196827 + GA-rich Low_complexity Low_complexity 5 107 0 1819 171 19 45 chr17 35241821 35241966 -50196514 + MLT1A1 LTR MaLR 1 148 -217 1727 165 157 9 chr17 35241966 35242311 -50196169 + MSTD LTR MaLR 1 396 0 1819 171 19 45 chr17 35242311 35242540 -50195940 + MLT1A1 LTR MaLR 148 365 0 692 217 94 42 chr17 35242924 35243136 -50195344 + MIR SINE MIR 13 235 -27 293 363 22 37 chr17 35243378 35243648 -50194832 + L1MD2 LINE L1 21 286 -6254 10447 226 59 26 chr17 35244159 35246435 -50192045 + L1MD2 LINE L1 916 3116 -3444 1819 159 21 10 chr17 35246435 35246725 -50191755 - AluJo SINE Alu -18 294 2 10447 226 59 26 chr17 35246725 35247270 -50191210 + L1MD2 LINE L1 3116 3642 -2918 1670 199 48 11 chr17 35247270 35247622 -50190858 + MLT1A1 LTR MaLR 1 365 0 10447 226 59 26 chr17 35247622 35248914 -50189566 + L1MD2 LINE L1 3642 4890 -1670 4800 23 2 9 chr17 35248914 35249483 -50188997 + L1PA4 LINE L1 5591 6155 0 10447 226 59 26 chr17 35249483 35249929 -50188551 + L1MD2 LINE L1 4890 5320 -1240 1968 155 6 25 chr17 35249929 35250246 -50188234 - AluSx SINE Alu -1 311 1 10447 226 59 26 chr17 35250246 35250498 -50187982 + L1MD2 LINE L1 5320 5829 -731 1151 159 0 0 chr17 35250500 35250670 -50187810 + FRAM SINE Alu 1 169 -7 2659 203 92 6 chr17 35250684 35251328 -50187152 + L1MD2 LINE L1 5834 6532 -221 2294 68 36 0 chr17 35251722 35252002 -50186478 - AluSg SINE Alu -14 296 7 319 248 70 57 chr17 35252423 35252580 -50185900 + L2 LINE L2 2949 3107 -165 199 231 215 0 chr17 35252672 35252737 -50185743 + L2 LINE L2 3192 3270 -2 287 311 92 0 chr17 35252937 35253056 -50185424 + MIR SINE MIR 16 145 -63 766 300 58 0 chr17 35253884 35254107 -50184373 + MIR SINE MIR 27 262 0 459 313 44 40 chr17 35254182 35254409 -50184071 + MIR SINE MIR 6 233 -29 792 281 70 42 chr17 35254583 35254942 -50183538 + MLT1H LTR MaLR 1 369 -180 1020 304 48 24 chr17 35255068 35255440 -50183040 - MLT1K LTR MaLR -206 382 2 681 82 20 0 chr17 35256115 35256213 -50182267 + MSTC LTR MaLR 1 100 -328 3306 74 21 0 chr17 35256213 35256648 -50181832 + L1PA10 LINE L1 5721 6164 -4 2001 140 14 29 chr17 35256793 35257142 -50181338 + MSTC LTR MaLR 85 428 0 775 192 33 22 chr17 35257602 35257784 -50180696 + MLT1B LTR MaLR 4 187 -187 519 128 10 87 chr17 35257797 35257992 -50180488 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 238 143 20 20 chr17 35257996 35258045 -50180435 + CT-rich Low_complexity Low_complexity 1 49 0 941 196 11 0 chr17 35258059 35258243 -50180237 + MLT1B LTR MaLR 205 390 0 214 316 74 11 chr17 35258272 35258367 -50180113 - MIR SINE MIR -43 219 119 309 297 59 10 chr17 35258544 35258645 -50179835 - MIR SINE MIR -69 193 88 1992 184 39 11 chr17 35258651 35259010 -50179470 + LTR32 LTR ERVL 14 382 -89 2456 84 0 0 chr17 35259017 35259326 -50179154 + AluY SINE Alu 1 309 -2 195 69 0 0 chr17 35259330 35259359 -50179121 + (CAAAAA)n Simple_repeat Simple_repeat 4 32 0 563 129 0 0 chr17 35259362 35259447 -50179033 + LTR32 LTR ERVL 382 466 -5 188 244 0 0 chr17 35259622 35259663 -50178817 + L2 LINE L2 3268 3308 -5 529 256 264 34 chr17 35259928 35260287 -50178193 + L2 LINE L2 2839 3294 -19 2193 119 3 0 chr17 35260287 35260580 -50177900 - AluSx SINE Alu -18 294 1 529 256 264 34 chr17 35260580 35260606 -50177874 + L2 LINE L2 3294 3313 0 203 133 0 0 chr17 35260900 35260930 -50177550 + (GGCTG)n Simple_repeat Simple_repeat 5 34 0 2132 119 0 0 chr17 35261418 35261696 -50176784 + AluSq SINE Alu 17 294 -19 467 210 25 76 chr17 35262524 35262681 -50175799 - LTR67 LTR ERVL -398 159 11 243 336 91 28 chr17 35262711 35262964 -50175516 + L2 LINE L2 2301 2569 -745 336 202 58 29 chr17 35263141 35263245 -50175235 - MLT1J LTR MaLR -9 502 396 433 216 168 0 chr17 35263440 35263565 -50174915 - MLT1J LTR MaLR -364 147 2 440 347 34 11 chr17 35263637 35263813 -50174667 - MIR SINE MIR -70 192 13 372 250 117 23 chr17 35263800 35263928 -50174552 + L2 LINE L2 3174 3313 0 * 672 163 0 0 chr17 35264073 35264202 -50174278 + (TG)n Simple_repeat Simple_repeat 1 129 0 1751 161 0 39 chr17 35264307 35264617 -50173863 - AluJo SINE Alu -14 298 1 900 220 48 0 chr17 35264712 35264918 -50173562 - MIR SINE MIR -3 259 45 270 220 0 17 chr17 35265030 35265089 -50173391 - MIR SINE MIR -63 145 88 1999 136 0 0 chr17 35265973 35266298 -50172182 + AluSx SINE Alu 1 312 0 449 270 106 61 chr17 35266376 35266743 -50171737 - MLT1H LTR MaLR -22 387 57 551 198 217 32 chr17 35266823 35266980 -50171500 + MER5A DNA MER1_type 4 189 0 384 335 47 75 chr17 35267058 35267380 -50171100 + L2 LINE L2 2944 3256 -16 216 0 0 0 chr17 35268014 35268038 -50170442 + (A)n Simple_repeat Simple_repeat 1 24 0 205 250 0 0 chr17 35269810 35269850 -50168630 - MIR SINE MIR -138 70 31 295 241 0 46 chr17 35270854 35270941 -50167539 + MIR3 SINE MIR 91 173 -35 293 243 303 6 chr17 35271211 35271358 -50167122 + MIR SINE MIR 3 190 -72 686 299 17 37 chr17 35271844 35272096 -50166384 + MIR SINE MIR 6 252 -10 312 272 49 12 chr17 35272144 35272225 -50166255 - L2 LINE L2 -47 3225 3142 241 234 121 32 chr17 35272755 35272879 -50165601 + MIR3 SINE MIR 20 154 -54 228 328 22 44 chr17 35273096 35273279 -50165201 - MARNA DNA Mariner -12 574 396 529 293 102 45 chr17 35273482 35273999 -50164481 + L2 LINE L2 2717 3268 -4 374 220 108 128 chr17 35274049 35274299 -50164181 - MIR SINE MIR -2 260 16 196 268 37 24 chr17 35274348 35274430 -50164050 - MIR3 SINE MIR -29 179 97 213 245 0 0 chr17 35275168 35275217 -50163263 + (TA)n Simple_repeat Simple_repeat 2 50 0 827 77 29 164 chr17 35275282 35275489 -50162991 - L1MA7 LINE L1 -2 6289 6111 286 257 224 26 chr17 35275719 35275871 -50162609 - MIR SINE MIR -33 229 48 269 346 10 20 chr17 35276763 35276864 -50161616 + MER81 DNA DNA 13 112 -2 406 154 33 0 chr17 35277152 35277243 -50161237 + CT-rich Low_complexity Low_complexity 1 94 0 * 711 366 12 0 chr17 35277232 35277396 -50161084 + C-rich Low_complexity Low_complexity 3 168 0 360 0 0 0 chr17 35277396 35277436 -50161044 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1971 112 27 3 chr17 35277436 35277730 -50160750 - AluSx SINE Alu -11 301 1 341 264 27 64 chr17 35278079 35278189 -50160291 + MIR3 SINE MIR 82 187 -21 * 440 224 84 28 chr17 35278160 35278303 -50160177 + MER5A DNA MER1_type 17 167 -22 517 131 81 20 chr17 35278471 35278570 -50159910 + MIR SINE MIR 85 189 -73 292 250 140 0 chr17 35279477 35279577 -50158903 + MIR SINE MIR 34 147 -115 192 385 22 11 chr17 35280081 35280172 -50158308 - MIR SINE MIR -87 121 30 222 267 0 17 chr17 35280191 35280251 -50158229 + (TAA)n Simple_repeat Simple_repeat 3 61 0 940 268 63 0 chr17 35280251 35280490 -50157990 - MIR SINE MIR 0 262 9 302 341 53 8 chr17 35281020 35281164 -50157316 - MIR3 SINE MIR -62 146 11 201 233 23 0 chr17 35281813 35281856 -50156624 + G-rich Low_complexity Low_complexity 4 47 0 1685 163 3 0 chr17 35281946 35282229 -50156251 - AluJb SINE Alu -28 284 1 604 242 110 48 chr17 35283435 35283662 -50154818 + MIR SINE MIR 2 242 -20 345 305 9 9 chr17 35283737 35283842 -50154638 + MIR SINE MIR 17 121 -87 559 244 122 6 chr17 35284587 35284743 -50153737 - MIR SINE MIR -21 241 68 588 244 88 31 chr17 35285517 35285710 -50152770 - MIR SINE MIR -52 210 7 420 283 0 0 chr17 35285776 35285868 -50152612 + MIR3 SINE MIR 108 199 -9 6350 78 24 3 chr17 35285882 35286732 -50151748 + L1PA11 LINE L1 5307 6173 -1 470 79 13 0 chr17 35287710 35287786 -50150694 + (TG)n Simple_repeat Simple_repeat 1 77 0 401 265 17 26 chr17 35288001 35288118 -50150362 + MIR3 SINE MIR 79 194 -14 400 148 10 50 chr17 35288299 35288400 -50150080 - L1MA8 LINE L1 0 6291 6195 1573 204 10 20 chr17 35288780 35289074 -50149406 - AluJb SINE Alu -11 291 1 462 318 73 34 chr17 35289271 35289357 -50149123 - MIR SINE MIR -8 254 173 1168 208 29 123 chr17 35289357 35289770 -50148710 - MLT1A2 LTR MaLR 0 374 1 462 318 73 34 chr17 35289770 35289862 -50148618 - MIR SINE MIR -89 173 69 278 284 31 71 chr17 35291697 35291824 -50146656 - L2 LINE L2 -8 3264 3143 339 244 119 9 chr17 35292853 35292965 -50145515 - MIR SINE MIR -66 142 31 313 276 142 67 chr17 35293135 35293336 -50145144 - MIR SINE MIR -3 259 36 1953 198 10 57 chr17 35293336 35293825 -50144655 + MER31B LTR ERV1 1 466 0 313 276 142 67 chr17 35293825 35293862 -50144618 - MIR SINE MIR -226 36 3 401 287 81 15 chr17 35293878 35294014 -50144466 + MIR SINE MIR 28 172 -90 189 321 149 16 chr17 35293990 35294049 -50144431 - MIR SINE MIR 0 262 212 * 2127 135 0 0 chr17 35294049 35294360 -50144120 - AluSx SINE Alu -1 311 1 189 321 149 16 chr17 35294360 35294489 -50143991 - MIR SINE MIR -50 212 45 * 193 271 133 73 chr17 35294412 35294563 -50143917 + MIR3 SINE MIR 42 201 -7 192 383 32 0 chr17 35294750 35294844 -50143636 - L3b LINE CR1 -330 1253 1157 255 125 0 0 chr17 35295144 35295184 -50143296 + (A)n Simple_repeat Simple_repeat 1 40 0 431 250 19 28 chr17 35295460 35295568 -50142912 + MIR SINE MIR 2 108 -154 * 1433 274 124 31 chr17 35295490 35296103 -50142377 + L2 LINE L2 2112 2781 -533 333 0 0 0 chr17 35296236 35296273 -50142207 + (TG)n Simple_repeat Simple_repeat 2 38 0 356 223 114 60 chr17 35296477 35296643 -50141837 - MER5A DNA MER1_type -3 186 12 486 279 42 82 chr17 35297294 35297986 -50140494 - L1MEd LINE L1 -4618 1513 962 690 214 0 0 chr17 35298009 35298135 -50140345 - FLAM_C SINE Alu -17 126 1 425 289 18 0 chr17 35298256 35298370 -50140110 - L2 LINE L2 -8 3305 3190 622 318 52 9 chr17 35298372 35298605 -50139875 - L1MEd LINE L1 -5316 803 561 4678 213 42 19 chr17 35298780 35300741 -50137739 - L1MB4 LINE L1 -29 6151 4075 275 70 0 23 chr17 35301338 35301381 -50137099 + (GA)n Simple_repeat Simple_repeat 1 42 0 209 300 0 0 chr17 35302067 35302117 -50136363 - L2 LINE L2 -83 3189 3140 180 277 0 0 chr17 35302156 35302203 -50136277 - L2 LINE L2 -87 3226 3180 454 309 28 60 chr17 35302492 35302709 -50135771 - L1MC4 LINE L1 -6 8036 7827 1521 224 120 28 chr17 35302734 35302979 -50135501 - L1ME2 LINE L1 -13 6151 5930 1512 177 56 0 chr17 35302979 35303271 -50135209 - AluJb SINE Alu 0 308 2 1521 224 120 28 chr17 35303271 35303556 -50134924 - L1ME2 LINE L1 -234 5930 5569 * 4626 243 90 34 chr17 35303542 35305416 -50133064 - L1ME2 LINE L1 -795 5351 3240 2801 10 0 0 chr17 35305576 35305888 -50132592 - AluYb8 SINE Alu -6 312 1 231 276 221 21 chr17 35306337 35306482 -50131998 + L2 LINE L2 3140 3313 0 320 331 126 11 chr17 35306869 35307075 -50131405 - MIR SINE MIR 0 262 34 194 365 40 0 chr17 35307196 35307270 -50131210 + L2 LINE L2 2893 2969 -345 189 121 0 0 chr17 35307633 35307666 -50130814 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1424 231 33 17 chr17 35307669 35308028 -50130452 - MLT1A1 LTR MaLR 0 365 1 755 219 107 16 chr17 35308045 35308237 -50130243 - MIR SINE MIR -35 227 23 642 321 37 20 chr17 35308261 35308507 -50129973 - MIR SINE MIR 0 262 13 366 356 88 21 chr17 35308526 35308720 -50129760 - L3 LINE CR1 -6 1571 1365 223 357 89 0 chr17 35309283 35309395 -50129085 - MIR3 SINE MIR -21 187 66 185 222 0 0 chr17 35309402 35309438 -50129042 + L2 LINE L2 3276 3311 -2 * 572 283 114 59 chr17 35309437 35309636 -50128844 - L3 LINE CR1 -1 1576 1355 2040 140 58 0 chr17 35309636 35309965 -50128515 - MER7A DNA MER2_type 0 346 1 572 283 114 59 chr17 35309965 35310055 -50128425 - L3 LINE CR1 -222 1355 1271 2282 121 36 36 chr17 35310266 35310630 -50127850 + THE1B LTR MaLR 1 364 0 1604 189 0 10 chr17 35312775 35313081 -50125399 + AluJo SINE Alu 1 303 -9 534 230 101 40 chr17 35313316 35313464 -50125016 + MIR SINE MIR 49 205 -57 702 272 23 37 chr17 35313469 35313686 -50124794 - MER21B LTR ERV1 -77 786 573 4199 111 44 47 chr17 35313690 35314410 -50124070 - LTR8A LTR ERV1 -3 724 7 1744 221 58 103 chr17 35314426 35315011 -50123469 - MER21B LTR ERV1 -289 574 16 307 158 18 18 chr17 35315016 35315073 -50123407 + Tigger5 DNA MER2_type 23 79 -2244 231 100 0 0 chr17 35315104 35315134 -50123346 + Tigger5 DNA MER2_type 2294 2323 0 883 146 0 22 chr17 35315268 35315405 -50123075 - AluJo SINE Alu -178 134 1 270 293 187 49 chr17 35315405 35315774 -50122706 - L2 LINE L2 -6 3266 2847 1920 60 4 22 chr17 35316421 35316689 -50121791 - L1PA7 LINE L1 -421 5733 5471 3310 49 5 2 chr17 35316689 35317113 -50121367 + L1PA7 LINE L1 5725 6151 -3 1019 277 55 13 chr17 35317774 35318263 -50120217 - L2 LINE L2 -38 3275 2759 660 294 77 13 chr17 35318799 35319034 -50119446 + MIR SINE MIR 12 261 -1 278 325 76 6 chr17 35319361 35319518 -50118962 + MIR3 SINE MIR 9 176 -32 204 67 0 0 chr17 35319549 35319579 -50118901 + (A)n Simple_repeat Simple_repeat 1 30 0 493 321 40 27 chr17 35321366 35321590 -50116890 + MIR SINE MIR 8 234 -28 208 395 28 18 chr17 35321657 35321766 -50116714 + L2 LINE L2 3163 3272 0 820 283 207 6 chr17 35322270 35322766 -50115714 + L2 LINE L2 2732 3313 0 782 279 66 26 chr17 35323830 35324260 -50114220 + L2 LINE L2 2755 3201 -112 458 206 47 0 chr17 35324265 35324372 -50114108 + MLT1D LTR MaLR 393 504 -1 260 339 17 9 chr17 35325152 35325267 -50113213 + MIR SINE MIR 37 152 -110 741 239 112 16 chr17 35325269 35325520 -50112960 + MER46C DNA MER2_type 1 275 -63 456 281 43 0 chr17 35325617 35325756 -50112724 - MIR SINE MIR -69 193 49 532 198 0 0 chr17 35326060 35326156 -50112324 - FRAM SINE Alu -81 95 1 227 267 17 0 chr17 35326645 35326705 -50111775 + L3 LINE CR1 715 775 -802 394 276 218 46 chr17 35326706 35327101 -50111379 + L3 LINE CR1 740 1202 -375 1745 117 84 44 chr17 35327165 35327350 -50111130 - AluJb SINE Alu -2 310 107 2327 97 0 0 chr17 35327350 35327638 -50110842 - AluSx SINE Alu -11 301 14 1745 117 84 44 chr17 35327638 35327750 -50110730 - AluJb SINE Alu -205 107 1 196 238 0 0 chr17 35327815 35327857 -50110623 + L3b LINE CR1 1345 1386 -197 1907 183 36 21 chr17 35328979 35329399 -50109081 + MSTB LTR MaLR 1 426 0 237 316 53 9 chr17 35329691 35329805 -50108675 - L3 LINE CR1 -101 1476 1358 254 262 60 54 chr17 35329921 35330070 -50108410 + MIR SINE MIR 28 177 -85 545 295 13 62 chr17 35330071 35330295 -50108185 + MIR SINE MIR 2 214 -48 759 226 24 0 chr17 35330295 35330463 -50108017 + MIR SINE MIR 90 261 -1 186 143 0 0 chr17 35331155 35331190 -50107290 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 422 224 215 48 chr17 35331366 35331590 -50106890 - MIR SINE MIR 0 262 5 243 213 164 0 chr17 35331909 35331970 -50106510 + L2 LINE L2 3199 3269 -3 836 205 47 64 chr17 35332348 35332645 -50105835 - LTR37A LTR ERV1 -2 424 133 265 316 21 0 chr17 35333085 35333180 -50105300 + GA-rich Low_complexity Low_complexity 1 97 0 2609 25 0 0 chr17 35333275 35333589 -50104891 + L1PA2 LINE L1 5842 6155 0 296 312 70 32 chr17 35333651 35333837 -50104643 + L2 LINE L2 2890 3082 -190 341 286 30 23 chr17 35333854 35333987 -50104493 + MIR SINE MIR 1 134 -128 252 296 0 0 chr17 35334199 35334280 -50104200 + MIR SINE MIR 179 259 -3 245 303 81 0 chr17 35334341 35334440 -50104040 + L2 LINE L2 3202 3308 -5 210 290 0 14 chr17 35335708 35335777 -50102703 - MIR SINE MIR -172 90 23 417 338 111 26 chr17 35336285 35336737 -50101743 + L2 LINE L2 2564 3054 -218 187 280 70 70 chr17 35336831 35336931 -50101549 - MIR SINE MIR -4 258 159 1454 251 91 19 chr17 35336951 35337425 -50101055 + MLT1G LTR MaLR 70 577 -13 505 274 4 0 chr17 35337433 35337575 -50100905 - MIR SINE MIR -41 167 21 309 310 101 0 chr17 35337611 35337740 -50100740 + L2 LINE L2 3122 3263 -9 834 263 21 8 chr17 35338648 35338888 -50099592 - MIR SINE MIR -3 259 17 315 226 12 48 chr17 35339431 35339515 -50098965 + L2 LINE L2 3233 3313 0 190 309 0 0 chr17 35340043 35340098 -50098382 - MIR SINE MIR -62 146 92 1798 161 42 44 chr17 35340112 35340196 -50098284 + MLT1A1 LTR MaLR 4 87 -278 2204 122 0 10 chr17 35340196 35340500 -50097980 + AluSg SINE Alu 1 301 -9 1798 161 42 44 chr17 35340500 35340776 -50097704 + MLT1A1 LTR MaLR 87 363 -2 309 322 8 8 chr17 35340876 35340994 -50097486 + (CATATA)n Simple_repeat Simple_repeat 4 121 0 1536 247 239 51 chr17 35341507 35341804 -50096676 + HAL1 LINE L1 37 277 -2230 817 140 0 22 chr17 35341804 35341940 -50096540 + FLAM_A SINE Alu 1 133 0 1536 247 239 51 chr17 35341940 35342888 -50095592 + HAL1 LINE L1 277 1516 -991 625 277 71 19 chr17 35342910 35343177 -50095303 + HAL1 LINE L1 1707 1987 -520 207 114 0 0 chr17 35344245 35344280 -50094200 + (TTA)n Simple_repeat Simple_repeat 2 36 0 590 206 48 27 chr17 35344301 35344447 -50094033 - MIR SINE MIR -51 211 63 2595 68 0 3 chr17 35344548 35344859 -50093621 - AluY SINE Alu -1 310 1 391 320 28 28 chr17 35344874 35344962 -50093518 - MIR SINE MIR -65 197 110 683 230 55 115 chr17 35344962 35345197 -50093283 + MER58A DNA MER1_type 4 224 0 391 320 28 28 chr17 35345197 35345286 -50093194 - MIR SINE MIR -151 111 20 406 248 48 0 chr17 35345443 35345548 -50092932 - MLT1L LTR MaLR -25 590 481 250 188 0 0 chr17 35345620 35345668 -50092812 - MLT1L LTR MaLR -241 374 327 435 277 88 13 chr17 35345751 35345910 -50092570 - MLT1L LTR MaLR -433 182 12 2331 113 0 0 chr17 35345982 35346283 -50092197 - AluSx SINE Alu -11 301 1 342 123 0 0 chr17 35346793 35346850 -50091630 + (TC)n Simple_repeat Simple_repeat 1 57 0 212 185 19 0 chr17 35347352 35347406 -50091074 + (CA)n Simple_repeat Simple_repeat 2 56 0 1144 153 5 0 chr17 35347947 35348150 -50090330 + L1PB1 LINE L1 5947 6150 -1 230 311 83 23 chr17 35349057 35349189 -50089291 - L2 LINE L2 -457 2857 2718 597 264 145 15 chr17 35350220 35350489 -50087991 + MLT1L LTR MaLR 308 611 -4 190 305 136 25 chr17 35350492 35350610 -50087870 + MIR3 SINE MIR 47 177 -31 426 253 240 0 chr17 35350918 35351064 -50087416 - MER5A DNA MER1_type -5 184 4 319 282 94 8 chr17 35351168 35351285 -50087195 + MIR SINE MIR 22 148 -114 2416 71 3 3 chr17 35351287 35351582 -50086898 + AluY SINE Alu 1 295 -16 534 225 22 51 chr17 35352027 35352165 -50086315 - MIR3 SINE MIR -34 174 41 215 278 19 0 chr17 35352748 35352802 -50085678 - L2 LINE L2 -84 3188 3134 542 243 77 18 chr17 35353737 35353906 -50084574 + MIR3 SINE MIR 15 193 -15 2067 170 112 51 chr17 35354543 35355054 -50083426 + MLT1F LTR MaLR 1 542 0 2311 182 117 2 chr17 35355060 35355548 -50082932 - MER74A LTR ERVL 0 558 15 342 276 85 98 chr17 35355932 35356330 -50082150 + L2 LINE L2 2880 3272 0 228 233 17 0 chr17 35356345 35356405 -50082075 + MIR SINE MIR 85 145 -63 183 100 0 0 chr17 35356406 35356436 -50082044 + (CAT)n Simple_repeat Simple_repeat 2 31 0 191 265 59 15 chr17 35357031 35357099 -50081381 + MIR SINE MIR 27 97 -111 698 298 76 16 chr17 35357643 35357958 -50080522 - MLT1J1 LTR MaLR 0 446 113 211 191 0 43 chr17 35358053 35358100 -50080380 + MIR3 SINE MIR 115 159 -49 310 291 101 76 chr17 35358102 35358260 -50080220 - MIR3 SINE MIR -16 192 31 467 282 64 26 chr17 35358306 35358462 -50080018 - MIR SINE MIR -50 212 51 1466 249 90 49 chr17 35358677 35359368 -50079112 + MER72 LTR ERV1 4 722 0 1137 263 36 0 chr17 35359411 35359712 -50078768 - MLT1J LTR MaLR -110 401 90 393 343 62 0 chr17 35359716 35359894 -50078586 + MIR SINE MIR 68 256 -6 198 0 0 0 chr17 35361113 35361135 -50077345 + (CAA)n Simple_repeat Simple_repeat 3 24 0 290 198 99 0 chr17 35361200 35361281 -50077199 - L2 LINE L2 -34 3238 3150 632 282 61 14 chr17 35361646 35361859 -50076621 + MIR SINE MIR 17 239 -23 1399 209 151 2 chr17 35362744 35363160 -50075320 - Charlie4a DNA MER1_type -1 507 30 470 206 361 6 chr17 35363201 35363381 -50075099 + MIR SINE MIR 5 248 -14 497 240 7 52 chr17 35363871 35364025 -50074455 + MIR3 SINE MIR 62 208 0 440 240 22 34 chr17 35364149 35364302 -50074178 + MLT1I LTR MaLR 58 203 -206 189 0 0 0 chr17 35365406 35365427 -50073053 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 611 261 131 7 chr17 35367537 35367828 -50070652 + L1ME4a LINE L1 5784 6110 -11 212 259 0 102 chr17 35367959 35368156 -50070324 + GA-rich Low_complexity Low_complexity 2 178 0 501 274 95 17 chr17 35369290 35369469 -50069011 + L3 LINE CR1 1384 1576 -1 303 410 7 0 chr17 35370066 35370210 -50068270 + L3 LINE CR1 1329 1473 -104 550 278 65 29 chr17 35370223 35370698 -50067782 + LTR33 LTR ERVL 4 521 0 237 248 221 9 chr17 35370884 35370997 -50067483 - MIR3 SINE MIR -59 149 13 326 299 52 82 chr17 35371730 35371924 -50066556 - MIR SINE MIR -65 197 10 932 258 182 31 chr17 35371924 35372347 -50066133 - LTR16C LTR ERVL 0 491 5 218 292 0 22 chr17 35372900 35372989 -50065491 + MIR3 SINE MIR 3 89 -119 204 239 82 141 chr17 35373241 35373425 -50065055 + L2 LINE L2 3027 3199 -73 3673 116 11 15 chr17 35373889 35374417 -50064063 + MER1A DNA MER1_type 1 526 -1 272 337 59 0 chr17 35374572 35374673 -50063807 - MIR SINE MIR -63 145 39 278 278 67 0 chr17 35375023 35375113 -50063367 - MIR3 SINE MIR -27 181 86 377 314 44 7 chr17 35375144 35375281 -50063199 + MIR SINE MIR 11 152 -110 250 279 0 15 chr17 35375426 35375494 -50062986 + CT-rich Low_complexity Low_complexity 1 67 0 974 253 37 4 chr17 35375689 35375934 -50062546 - MIR SINE MIR -1 261 9 210 158 0 0 chr17 35376053 35376091 -50062389 + A-rich Low_complexity Low_complexity 1 38 0 250 322 43 9 chr17 35376618 35376733 -50061747 - MIR3 SINE MIR -25 183 65 1707 223 97 46 chr17 35376983 35377540 -50060940 - MLT1E LTR MaLR 0 593 1 257 262 8 12 chr17 35377540 35377678 -50060802 + MIR SINE MIR 69 261 -1 380 320 16 8 chr17 35378477 35378599 -50059881 - MIR3 SINE MIR -48 160 38 645 235 132 4 chr17 35379183 35379467 -50059013 - HAL1b LINE L1 -1 2506 797 258 233 8 90 chr17 35379535 35379668 -50058812 - HAL1b LINE L1 -480 868 747 361 253 117 57 chr17 35379709 35380009 -50058471 - HAL1 LINE L1 -355 2152 1835 730 255 189 19 chr17 35380028 35380393 -50058087 - HAL1 LINE L1 -743 1764 1338 2703 226 38 38 chr17 35380476 35380807 -50057673 - L1ME3 LINE L1 -101 6061 5731 1597 182 0 7 chr17 35380807 35381093 -50057387 - L1PB4 LINE L1 -18 6138 5855 2703 226 38 38 chr17 35381093 35381586 -50056894 - L1ME3 LINE L1 -431 5731 5236 297 0 0 0 chr17 35381595 35381628 -50056852 + (TG)n Simple_repeat Simple_repeat 2 34 0 358 226 36 0 chr17 35381688 35381772 -50056708 - L1ME3 LINE L1 -101 6061 5975 595 275 12 83 chr17 35381809 35381894 -50056586 - L1ME3 LINE L1 -916 5230 5141 2072 114 29 0 chr17 35381894 35382192 -50056288 + AluSx SINE Alu 1 306 0 595 275 12 83 chr17 35382192 35382443 -50056037 - L1ME3 LINE L1 -1005 5141 4917 255 302 104 11 chr17 35382444 35382601 -50055879 - HAL1 LINE L1 -1155 1352 1174 240 35 0 0 chr17 35382601 35382630 -50055850 + (CA)n Simple_repeat Simple_repeat 2 30 0 255 302 104 11 chr17 35382630 35382654 -50055826 - HAL1 LINE L1 -1333 1174 1154 216 0 0 0 chr17 35382662 35382686 -50055794 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 271 159 9 chr17 35383580 35383687 -50054793 - MIR SINE MIR -3 259 137 4499 155 20 29 chr17 35383695 35384541 -50053939 - L1MB7 LINE L1 -10 6174 5331 2152 144 0 0 chr17 35384541 35384839 -50053641 - AluSx SINE Alu -14 298 1 4499 155 20 29 chr17 35384839 35385057 -50053423 - L1MB7 LINE L1 -853 5331 5112 427 287 26 0 chr17 35385059 35385174 -50053306 - MIR SINE MIR -114 148 31 280 316 61 17 chr17 35385683 35385855 -50052625 - MIR3 SINE MIR -73 135 5 209 291 38 13 chr17 35386328 35386407 -50052073 + MIR SINE MIR 57 137 -71 1053 282 117 5 chr17 35386618 35386904 -50051576 + L2 LINE L2 2683 2936 -377 1160 143 84 5 chr17 35386904 35387107 -50051373 + MER20 DNA MER1_type 1 219 0 1053 282 117 5 chr17 35387107 35387338 -50051142 + L2 LINE L2 2936 3277 -36 241 280 65 32 chr17 35387315 35387408 -50051072 - MIR3 SINE MIR -27 181 86 * 1223 281 27 27 chr17 35387408 35387852 -50050628 + LTR16A LTR ERVL 1 444 -6 224 241 35 0 chr17 35388612 35388670 -50049810 + GA-rich Low_complexity Low_complexity 2 61 0 389 336 14 0 chr17 35389171 35389327 -50049153 + MIR3 SINE MIR 23 181 -27 369 344 120 10 chr17 35389571 35389763 -50048717 - MIR SINE MIR -7 255 43 552 286 146 19 chr17 35389917 35390130 -50048350 + MIR SINE MIR 10 249 -13 1945 238 71 18 chr17 35391238 35391890 -50046590 + L1ME LINE L1 10 695 -5375 643 251 13 54 chr17 35391951 35392215 -50046265 + MIR SINE MIR 8 256 -6 2265 113 0 0 chr17 35392306 35392625 -50045855 - AluSx SINE Alu 0 312 1 315 313 10 10 chr17 35392930 35393029 -50045451 - MIR3 SINE MIR -1 207 109 241 358 16 49 chr17 35393195 35393318 -50045162 - MIR SINE MIR -60 148 30 198 0 0 0 chr17 35393667 35393689 -50044791 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 243 61 0 0 chr17 35393688 35393721 -50044759 + (CA)n Simple_repeat Simple_repeat 1 33 0 802 159 7 13 chr17 35394444 35394595 -50043885 - L1MB3 LINE L1 -2 6181 6032 379 228 18 35 chr17 35395559 35395673 -50042807 - L2 LINE L2 -261 3052 2941 252 250 0 0 chr17 35395796 35395852 -50042628 - MIR SINE MIR -65 143 88 391 259 170 7 chr17 35396032 35396167 -50042313 + MIR SINE MIR 20 176 -86 253 288 25 0 chr17 35397047 35397121 -50041359 + MIR SINE MIR 53 129 -128 1662 191 17 14 chr17 35397121 35397415 -50041065 + AluJo SINE Alu 1 295 -17 764 276 19 9 chr17 35397504 35397714 -50040766 + MIR SINE MIR 43 254 -8 217 222 19 19 chr17 35398811 35398865 -50039615 - L2 LINE L2 -9 3304 3251 1917 116 19 0 chr17 35399904 35400183 -50038297 + AluSx SINE Alu 21 304 0 399 188 150 45 chr17 35400189 35400322 -50038158 - MIR SINE MIR 0 262 116 465 276 47 37 chr17 35400449 35400666 -50037814 - MIR SINE MIR -34 228 7 385 313 125 44 chr17 35401335 35401696 -50036784 + L2 LINE L2 2863 3252 -20 490 299 137 5 chr17 35401853 35402057 -50036423 - MIR SINE MIR 0 262 32 803 224 39 0 chr17 35402675 35402831 -50035649 + FRAM SINE Alu 1 162 -4 247 222 51 72 chr17 35402873 35402975 -50035505 + MIR3 SINE MIR 83 171 -37 1750 179 10 17 chr17 35403060 35403362 -50035118 + AluJo SINE Alu 1 300 -12 802 259 45 5 chr17 35403420 35403640 -50034840 - MIR SINE MIR -15 247 19 183 306 306 0 chr17 35403725 35403833 -50034647 - MIR SINE MIR -19 243 103 180 306 49 42 chr17 35404817 35404961 -50033519 - L3b LINE CR1 -141 1442 1298 458 261 146 18 chr17 35405325 35405490 -50032990 + MIR SINE MIR 47 232 -30 505 266 44 59 chr17 35406325 35406528 -50031952 + MIR SINE MIR 47 246 -16 419 87 14 0 chr17 35406575 35406644 -50031836 + (CA)n Simple_repeat Simple_repeat 2 71 0 303 260 130 79 chr17 35407322 35407499 -50030981 - MIR SINE MIR -44 218 33 410 190 70 10 chr17 35408304 35408404 -50030076 - MER5B DNA MER1_type -72 106 1 588 236 75 105 chr17 35408429 35408696 -50029784 + L2 LINE L2 3014 3272 0 850 263 24 5 chr17 35409017 35409226 -50029254 + MIR SINE MIR 29 241 -21 268 179 141 77 chr17 35410222 35410300 -50028180 + MIR3 SINE MIR 87 169 -39 1828 223 16 83 chr17 35410331 35410888 -50027592 + MLT2B1 LTR ERVL 1 520 0 487 235 181 0 chr17 35411199 35411348 -50027132 + MIR SINE MIR 87 262 0 505 153 54 45 chr17 35411627 35411738 -50026742 - L1MC4 LINE L1 -382 7660 7549 781 273 46 28 chr17 35411777 35412059 -50026421 - L1MC4 LINE L1 -1015 7027 6741 337 111 95 0 chr17 35412062 35412125 -50026355 - Alu SINE Alu 0 302 234 496 282 46 66 chr17 35412125 35412195 -50026285 - L1MC4 LINE L1 -1232 6810 6740 2049 138 24 0 chr17 35412195 35412491 -50025989 - AluSx SINE Alu -9 303 1 496 282 46 66 chr17 35412491 35412661 -50025819 - L1MC4 LINE L1 -1302 6740 6575 2290 113 0 22 chr17 35413723 35414041 -50024439 - AluSx SINE Alu -1 311 1 252 284 0 15 chr17 35414374 35414441 -50024039 + MIR SINE MIR 2 67 -195 192 264 209 73 chr17 35414657 35414877 -50023603 - MIR SINE MIR -12 250 1 213 248 198 20 chr17 35414994 35415095 -50023385 + MIR3 SINE MIR 9 127 -81 220 232 130 14 chr17 35415239 35415308 -50023172 + MIR SINE MIR 157 233 -29 2619 46 10 0 chr17 35415332 35415636 -50022844 + AluY SINE Alu 1 307 -4 452 224 41 10 chr17 35416231 35416329 -50022151 + MIR3 SINE MIR 98 198 -10 873 142 0 0 chr17 35416434 35416561 -50021919 - FLAM_C SINE Alu -6 127 1 330 249 140 35 chr17 35416672 35416799 -50021681 + MIR SINE MIR 66 199 -63 798 180 112 12 chr17 35417132 35417293 -50021187 + MER45A DNA AcHobo 1 177 -1 1779 193 0 7 chr17 35417693 35417999 -50020481 - AluJb SINE Alu -8 304 1 1782 181 13 7 chr17 35418007 35418316 -50020164 - AluJo SINE Alu -1 311 1 426 285 42 7 chr17 35419523 35419667 -50018813 + MIR SINE MIR 28 176 -86 356 265 103 8 chr17 35420276 35420393 -50018087 + MIR3 SINE MIR 3 130 -78 182 333 130 0 chr17 35420422 35420491 -50017989 + L3b LINE CR1 1477 1554 -29 527 299 82 16 chr17 35420974 35421168 -50017312 + MIR SINE MIR 5 211 -51 436 276 86 9 chr17 35422230 35422346 -50016134 - L2 LINE L2 0 3313 3189 412 286 97 38 chr17 35426468 35426653 -50011827 - MIR SINE MIR -46 216 21 366 339 62 0 chr17 35427531 35427661 -50010819 - MIR3 SINE MIR -40 168 31 2324 113 3 0 chr17 35427666 35427977 -50010503 - AluSp SINE Alu -1 312 1 2328 115 7 0 chr17 35428028 35428333 -50010147 - AluSx SINE Alu -5 307 1 1959 112 51 4 chr17 35428349 35428625 -50009855 - AluSx SINE Alu -23 289 1 989 121 92 0 chr17 35429929 35430070 -50008410 - FRAM SINE Alu -23 153 1 2168 100 3 51 chr17 35430723 35431034 -50007446 - AluSx SINE Alu -16 296 1 745 228 116 16 chr17 35433591 35433780 -50004700 + MER3 DNA MER1_type 2 209 0 441 244 119 18 chr17 35433789 35433957 -50004523 + MIR SINE MIR 50 234 -28 1896 148 0 30 chr17 35435156 35435460 -50003020 - AluSx SINE Alu -17 295 1 1693 163 17 17 chr17 35435856 35436017 -50002463 - AluJo SINE Alu -15 297 134 2529 53 0 10 chr17 35436017 35436350 -50002130 - AluY SINE Alu 0 311 1 1693 163 17 17 chr17 35436350 35436476 -50002004 - AluJo SINE Alu -177 135 10 2238 104 21 0 chr17 35437892 35438181 -50000299 + AluSg SINE Alu 2 296 -14 195 244 44 0 chr17 35440361 35440406 -49998074 + L2 LINE L2 3221 3267 -5 1169 223 17 4 chr17 35440424 35440662 -49997818 - MIR SINE MIR -1 261 21 2009 146 3 3 chr17 35442385 35442686 -49995794 - AluSx SINE Alu -11 301 1 349 288 59 7 chr17 35443119 35443272 -49995208 + MER103 DNA DNA 3 163 -3 228 315 144 0 chr17 35443543 35443654 -49994826 + MIR SINE MIR 136 262 0 339 324 87 24 chr17 35444254 35444461 -49994019 + MIR SINE MIR 8 227 -35 276 316 168 54 chr17 35445289 35445605 -49992875 - L3 LINE CR1 -95 1482 1131 2046 136 24 3 chr17 35446798 35447093 -49991387 - AluJb SINE Alu -11 301 1 2356 131 12 12 chr17 35447673 35448010 -49990470 + MER1B DNA MER1_type 1 337 0 712 281 63 21 chr17 35449486 35449724 -49988756 + MIR SINE MIR 12 259 -3 460 323 32 60 chr17 35449843 35450060 -49988420 - MIR SINE MIR -50 212 2 234 299 88 44 chr17 35452453 35452590 -49985890 + L2 LINE L2 3128 3270 -2 392 221 39 0 chr17 35452688 35452765 -49985715 + MIR SINE MIR 28 107 -155 353 245 41 48 chr17 35452851 35452998 -49985482 + MIR SINE MIR 111 256 -6 593 306 91 24 chr17 35453401 35453610 -49984870 - MIR SINE MIR -17 245 23 198 196 75 84 chr17 35453701 35453808 -49984672 - MIR SINE MIR -78 130 25 2239 93 17 0 chr17 35454123 35454414 -49984066 - AluSq SINE Alu -11 302 7 293 313 61 43 chr17 35454419 35454582 -49983898 - MIR SINE MIR -96 166 1 243 276 149 35 chr17 35454654 35454828 -49983652 + L2 LINE L2 3120 3313 0 2384 93 3 0 chr17 35454862 35455164 -49983316 + AluSp SINE Alu 1 303 -10 2262 114 0 0 chr17 35455170 35455467 -49983013 + AluSq SINE Alu 1 297 -16 1939 148 3 30 chr17 35455472 35455775 -49982705 + AluJb SINE Alu 1 295 -17 264 291 29 29 chr17 35456119 35456222 -49982258 - MIR3 SINE MIR -25 183 81 1217 137 0 26 chr17 35456760 35456930 -49981550 - AluSg/x SINE Alu -10 302 136 1493 75 16 0 chr17 35456930 35457118 -49981362 - AluY SINE Alu -2 309 119 1217 137 0 26 chr17 35457118 35457137 -49981343 - AluSg/x SINE Alu -176 136 118 6321 27 0 0 chr17 35457137 35457887 -49980593 - L1PA3 LINE L1 -27 6128 5379 541 93 13 0 chr17 35457888 35457963 -49980517 - AluY SINE Alu -179 132 57 1322 152 0 0 chr17 35457963 35458154 -49980326 - AluSx SINE Alu -121 191 1 329 314 22 36 chr17 35458199 35458336 -49980144 + MIR SINE MIR 1 135 -127 2428 79 0 0 chr17 35458536 35458826 -49979654 - AluSx SINE Alu -22 290 1 233 392 0 10 chr17 35458904 35459001 -49979479 - L2 LINE L2 -70 3202 3107 2565 58 0 0 chr17 35459233 35459541 -49978939 + AluY SINE Alu 1 308 -3 342 339 155 35 chr17 35459755 35460524 -49977956 - L2 LINE L2 -724 2590 1730 2157 122 3 0 chr17 35460666 35460985 -49977495 + AluSq SINE Alu 1 313 0 1660 184 19 26 chr17 35461144 35461280 -49977200 + AluJo SINE Alu 1 136 -176 2493 58 0 3 chr17 35461280 35461606 -49976874 + AluY SINE Alu 1 325 0 1660 184 19 26 chr17 35461606 35461778 -49976702 + AluJo SINE Alu 136 308 -4 2130 128 10 0 chr17 35461948 35462244 -49976236 - AluSx SINE Alu -12 300 2 2371 88 0 7 chr17 35462547 35462844 -49975636 + AluSc SINE Alu 1 295 -14 328 277 0 32 chr17 35463041 35463127 -49975353 - L1MC4 LINE L1 -1350 6692 6608 2179 122 7 0 chr17 35463127 35463421 -49975059 - AluSq SINE Alu -17 296 1 677 262 76 19 chr17 35464955 35465165 -49973315 - MIR SINE MIR -20 242 21 228 275 0 0 chr17 35465239 35465308 -49973172 + L2 LINE L2 1636 1704 -1610 1882 218 134 48 chr17 35465313 35465428 -49973052 + L1ME3A LINE L1 5404 5508 -662 2369 98 7 3 chr17 35465428 35465734 -49972746 + AluSx SINE Alu 4 310 -2 1882 218 134 48 chr17 35465734 35466320 -49972160 + L1ME3A LINE L1 5508 6165 -5 1901 131 14 14 chr17 35466335 35466626 -49971854 - AluJb SINE Alu -21 291 1 2360 97 0 0 chr17 35466637 35466937 -49971543 - AluSc SINE Alu -9 300 1 874 245 142 24 chr17 35466999 35467103 -49971377 + L2 LINE L2 1697 1787 -1527 2232 107 10 0 chr17 35467103 35467394 -49971086 - AluSp SINE Alu -19 294 1 874 245 142 24 chr17 35467394 35467713 -49970767 + L2 LINE L2 1787 2170 -1144 2422 95 0 9 chr17 35467739 35468054 -49970426 + AluSx SINE Alu 1 312 0 240 306 18 36 chr17 35468150 35468261 -49970219 + L2 LINE L2 2921 3029 -284 880 144 40 64 chr17 35468261 35468285 -49970195 - FRAM SINE Alu -143 169 146 261 0 0 0 chr17 35468285 35468314 -49970166 + (TG)n Simple_repeat Simple_repeat 1 29 0 880 144 40 64 chr17 35468314 35468462 -49970018 - FRAM SINE Alu -166 146 1 358 274 148 15 chr17 35468482 35468617 -49969863 + L2 LINE L2 3119 3271 -42 212 258 15 15 chr17 35468624 35468690 -49969790 + L2 LINE L2 2619 2684 -630 2198 116 7 0 chr17 35469154 35469455 -49969025 + AluSx SINE Alu 1 303 -9 2341 99 3 10 chr17 35469959 35470273 -49968207 + AluSx SINE Alu 1 312 0 1273 166 96 33 chr17 35471525 35471796 -49966684 - AluJo SINE Alu -24 288 1 1316 121 16 0 chr17 35471855 35472045 -49966435 + AluSg/x SINE Alu 100 292 -18 1130 157 0 0 chr17 35472296 35472455 -49966025 - AluJb SINE Alu -17 295 137 190 211 0 39 chr17 35472545 35472597 -49965883 - L2 LINE L2 -77 3236 3187 2348 112 0 3 chr17 35472649 35472953 -49965527 - AluSx SINE Alu -9 303 1 2157 113 3 7 chr17 35473161 35473461 -49965019 + AluSx SINE Alu 1 299 -13 182 330 45 11 chr17 35474829 35474917 -49963563 + MIR SINE MIR 168 258 -4 210 37 0 0 chr17 35474946 35474973 -49963507 + (TTG)n Simple_repeat Simple_repeat 2 28 0 948 181 6 0 chr17 35475005 35475171 -49963309 - AluJb SINE Alu -9 303 137 2248 123 0 0 chr17 35475171 35475471 -49963009 - AluSx SINE Alu -12 300 1 2396 81 0 0 chr17 35475540 35475825 -49962655 + AluY SINE Alu 1 288 -23 198 0 0 0 chr17 35475825 35475847 -49962633 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2396 81 0 0 chr17 35475847 35475858 -49962622 + AluY SINE Alu 287 297 -14 201 39 0 0 chr17 35476724 35476750 -49961730 + (CA)n Simple_repeat Simple_repeat 1 26 0 2352 104 0 0 chr17 35477219 35477517 -49960963 + AluSx SINE Alu 1 298 -14 971 147 18 12 chr17 35477520 35477683 -49960797 + AluJb SINE Alu 137 300 -12 681 145 29 65 chr17 35477694 35477803 -49960677 + AluJo/FLAM SINE Alu 1 106 -196 1522 189 15 4 chr17 35477803 35478067 -49960413 - AluJo SINE Alu -34 278 12 681 145 29 65 chr17 35478067 35478095 -49960385 + AluJo/FLAM SINE Alu 106 133 -169 2048 123 40 0 chr17 35478119 35478420 -49960060 + AluSp SINE Alu 1 313 0 391 233 22 11 chr17 35479416 35479506 -49958974 + MIR3 SINE MIR 93 183 -25 208 197 13 66 chr17 35479959 35480035 -49958445 + GA-rich Low_complexity Low_complexity 3 74 0 396 296 88 19 chr17 35480086 35480245 -49958235 - L2 LINE L2 0 3272 3103 366 312 148 20 chr17 35480925 35481127 -49957353 + MIR SINE MIR 1 228 -34 462 218 0 30 chr17 35481809 35481910 -49956570 - U13 snRNA snRNA -2 102 5 232 226 48 0 chr17 35482190 35482252 -49956228 + MIR SINE MIR 81 145 -117 193 271 21 0 chr17 35482277 35482325 -49956155 + L2 LINE L2 3204 3252 -20 2437 71 0 3 chr17 35482340 35482637 -49955843 - AluY SINE Alu -15 296 1 2706 173 34 27 chr17 35482749 35482812 -49955668 + LTR26B LTR ERV1 1 62 -469 2135 100 14 0 chr17 35482812 35483129 -49955351 + AluSq SINE Alu 1 321 0 2706 173 34 27 chr17 35483129 35483591 -49954889 + LTR26B LTR ERV1 62 531 0 2455 86 7 0 chr17 35483795 35484096 -49954384 - AluSp SINE Alu -10 303 1 478 340 56 46 chr17 35484096 35484324 -49954156 + L2 LINE L2 2517 2741 -572 2281 115 0 13 chr17 35484324 35484638 -49953842 - AluSq SINE Alu -3 310 1 478 340 56 46 chr17 35484638 35484890 -49953590 + L2 LINE L2 2741 3001 -312 198 293 0 17 chr17 35484914 35484972 -49953508 + L2 LINE L2 3257 3313 0 307 254 0 0 chr17 35485282 35485345 -49953135 - L2 LINE L2 0 3272 3210 241 245 82 20 chr17 35485715 35485813 -49952667 - MER5B DNA MER1_type -71 107 4 813 246 128 79 chr17 35485880 35485910 -49952570 + MLT1H LTR MaLR 1 28 -521 2399 83 0 0 chr17 35485910 35486200 -49952280 + AluSg SINE Alu 1 290 -20 813 246 128 79 chr17 35486200 35486437 -49952043 + MLT1H LTR MaLR 28 252 -297 2394 93 7 0 chr17 35486437 35486738 -49951742 - AluSx SINE Alu -9 303 1 813 246 128 79 chr17 35486738 35487004 -49951476 + MLT1H LTR MaLR 252 549 0 564 308 49 26 chr17 35487008 35487313 -49951167 - L3b LINE CR1 -143 1440 1129 1103 195 4 22 chr17 35488891 35489108 -49949372 - AluSg/x SINE Alu -25 287 73 2264 100 10 0 chr17 35489108 35489399 -49949081 - AluSx SINE Alu -18 294 1 2203 102 3 3 chr17 35489542 35489836 -49948644 + AluSc SINE Alu 1 294 -15 286 277 181 30 chr17 35489999 35490165 -49948315 - L2 LINE L2 -195 3077 2887 2415 99 3 0 chr17 35490593 35490905 -49947575 + AluSp SINE Alu 1 313 0 2400 92 3 9 chr17 35492693 35493008 -49945472 + AluSp SINE Alu 1 313 0 1085 152 11 0 chr17 35493391 35493569 -49944911 + AluSg/x SINE Alu 128 307 -3 256 251 5 163 chr17 35494421 35494536 -49943944 - MER5A DNA MER1_type -12 177 46 2296 120 0 3 chr17 35494536 35494837 -49943643 - AluSx SINE Alu -12 300 1 256 251 5 163 chr17 35494837 35494876 -49943604 - MER5A DNA MER1_type -143 46 59 2348 81 13 7 chr17 35494876 35495174 -49943306 - AluSx SINE Alu -12 300 1 256 251 5 163 chr17 35495174 35495221 -49943259 - MER5A DNA MER1_type -129 60 7 230 204 0 19 chr17 35497407 35497461 -49941019 + (TA)n Simple_repeat Simple_repeat 1 53 0 1694 177 7 0 chr17 35497592 35497875 -49940605 - AluJb SINE Alu -13 299 15 1999 164 26 72 chr17 35498301 35498334 -49940146 + L1MD1 LINE L1 5452 5485 -874 2086 141 0 3 chr17 35498334 35498639 -49939841 + AluSx SINE Alu 1 304 -8 1999 164 26 72 chr17 35498639 35498755 -49939725 + L1MD1 LINE L1 5485 5605 -754 2039 124 3 13 chr17 35498755 35499053 -49939427 + AluSx SINE Alu 1 295 -17 1999 164 26 72 chr17 35499053 35499359 -49939121 + L1MD1 LINE L1 5605 5887 -472 348 130 19 0 chr17 35499359 35499413 -49939067 + FLAM SINE Alu 75 129 -4 2096 144 0 0 chr17 35499418 35499717 -49938763 + AluJb SINE Alu 1 299 -13 958 211 32 113 chr17 35499752 35499986 -49938494 + L1MD1 LINE L1 5879 6072 -170 255 61 0 0 chr17 35499986 35500019 -49938461 + (CA)n Simple_repeat Simple_repeat 2 34 0 958 211 32 113 chr17 35500019 35500163 -49938317 + L1MD1 LINE L1 6072 6226 -16 2383 92 3 0 chr17 35500181 35500475 -49938005 + AluSp SINE Alu 1 295 -18 306 50 0 0 chr17 35501183 35501223 -49937257 + (CA)n Simple_repeat Simple_repeat 1 40 0 461 270 98 0 chr17 35501985 35502148 -49936332 + MIR SINE MIR 81 259 -3 2454 93 0 3 chr17 35503403 35503714 -49934766 - AluSx SINE Alu -2 310 1 398 96 0 0 chr17 35503744 35503796 -49934684 + MER66B LTR ERV1 295 346 -140 2217 96 11 0 chr17 35503819 35504146 -49934334 + AluSp SINE Alu 2 331 0 221 175 38 12 chr17 35504470 35504550 -49933930 + (TTAAA)n Simple_repeat Simple_repeat 3 84 0 471 229 85 25 chr17 35504748 35504994 -49933486 + MER5C DNA MER1_type 1 322 -2 842 41 0 0 chr17 35505180 35505278 -49933202 - MER30 DNA MER1_type -130 100 3 239 293 15 75 chr17 35505294 35505427 -49933053 + MIR SINE MIR 20 144 -64 198 321 28 18 chr17 35505524 35505633 -49932847 + MER5A DNA MER1_type 80 189 0 1804 186 7 3 chr17 35505720 35506021 -49932459 - AluJo SINE Alu -10 302 1 2020 132 0 39 chr17 35506105 35506416 -49932064 + AluSx SINE Alu 1 299 -13 1300 80 0 6 chr17 35506573 35506735 -49931745 - AluSx SINE Alu -143 169 9 599 238 63 68 chr17 35510120 35510326 -49928154 - MIR SINE MIR -11 251 47 2281 129 0 0 chr17 35510918 35511227 -49927253 + AluSx SINE Alu 1 309 -3 225 222 0 0 chr17 35511326 35511371 -49927109 + MER5B DNA MER1_type 1 45 -133 2142 109 17 0 chr17 35511381 35511674 -49926806 + AluSx SINE Alu 6 303 -9 2056 127 14 3 chr17 35511734 35512025 -49926455 + AluSx SINE Alu 2 295 -17 1945 103 0 96 chr17 35512027 35512363 -49926117 + AluSx SINE Alu 1 306 0 25 31 0 0 chr17 35512414 35512446 -49926034 + AT_rich Low_complexity Low_complexity 1 32 0 189 279 44 29 chr17 35512450 35512518 -49925962 + MER5A DNA MER1_type 71 139 -50 2217 110 7 0 chr17 35512848 35513147 -49925333 - AluSq SINE Alu -12 301 1 184 211 39 19 chr17 35513262 35513314 -49925166 + L3b LINE CR1 1200 1252 -331 1605 169 30 17 chr17 35513622 35513917 -49924563 + AluJb SINE Alu 1 299 -13 1724 178 31 0 chr17 35514497 35514783 -49923697 + AluJb SINE Alu 1 295 -17 26 50 0 0 chr17 35516477 35516517 -49921963 + GC_rich Low_complexity Low_complexity 1 40 0 242 247 21 31 chr17 35516700 35516723 -49921757 + C-rich Low_complexity Low_complexity 5 27 -73 189 0 0 0 chr17 35516723 35516744 -49921736 + (CCCGG)n Simple_repeat Simple_repeat 4 24 0 242 247 21 31 chr17 35516744 35516817 -49921663 + C-rich Low_complexity Low_complexity 27 100 0 1744 101 124 4 chr17 35517748 35518005 -49920475 + AluSq SINE Alu 1 288 -25 359 273 167 0 chr17 35518026 35518176 -49920304 - MIR SINE MIR -30 232 58 1658 130 45 41 chr17 35518229 35518521 -49919959 - AluSx SINE Alu -15 297 5 2235 102 30 3 chr17 35518888 35519191 -49919289 + AluSx SINE Alu 1 311 -1 210 293 12 24 chr17 35519823 35519905 -49918575 - MIR SINE MIR -3 259 179 778 205 72 0 chr17 35520333 35520499 -49917981 - MER45A DNA AcHobo 0 178 1 437 278 80 17 chr17 35520562 35520738 -49917742 - MIR SINE MIR -17 245 59 448 273 62 40 chr17 35521040 35521216 -49917264 + L1M4 LINE L1 3997 4176 -1970 511 92 0 0 chr17 35521328 35521393 -49917087 + U6 snRNA snRNA 1 65 -42 24 0 0 0 chr17 35521393 35521417 -49917063 + AT_rich Low_complexity Low_complexity 1 24 0 2205 134 0 0 chr17 35521522 35521821 -49916659 - AluSx SINE Alu -13 299 1 201 288 163 25 chr17 35522110 35522270 -49916210 + MIR SINE MIR 32 213 -49 518 252 29 66 chr17 35522330 35522572 -49915908 + MLT1L LTR MaLR 17 249 -366 2052 114 28 0 chr17 35522620 35522910 -49915570 + AluSx SINE Alu 1 298 -14 2109 102 13 26 chr17 35522927 35523230 -49915250 + AluSq SINE Alu 1 299 -14 953 268 125 8 chr17 35523234 35523603 -49914877 + MER57B LTR ERV1 23 434 0 794 158 0 29 chr17 35523614 35523753 -49914727 - AluJo SINE Alu -176 136 2 324 273 78 23 chr17 35523793 35523921 -49914559 + MLT1L LTR MaLR 316 450 -165 462 96 14 0 chr17 35573921 35573994 -49864486 + MER66B LTR ERV1 413 486 0 610 223 40 0 chr17 35575000 35575148 -49863332 - MIR SINE MIR 0 262 109 247 294 231 14 chr17 35576878 35577021 -49861459 - MIR3 SINE MIR -2 206 33 207 202 75 106 chr17 35577186 35577280 -49861200 - MIR3 SINE MIR -28 180 90 728 305 51 27 chr17 35578309 35578565 -49859915 + MIR SINE MIR 1 262 0 249 333 111 16 chr17 35579161 35579287 -49859193 + MIR SINE MIR 49 186 -76 1821 160 0 19 chr17 35579300 35579607 -49858873 + AluJb SINE Alu 11 311 -1 208 289 10 62 chr17 35579691 35579788 -49858692 - MIR SINE MIR -67 141 56 195 375 0 0 chr17 35580430 35580510 -49857970 + MIR SINE MIR 61 140 -122 190 53 132 0 chr17 35580894 35580932 -49857548 - L2 LINE L2 -348 2965 2923 180 414 145 0 chr17 35581070 35581215 -49857265 + L2 LINE L2 3107 3272 0 21 0 0 0 chr17 35581593 35581614 -49856866 + GC_rich Low_complexity Low_complexity 1 21 0 278 268 14 0 chr17 35581825 35581896 -49856584 - MIR SINE MIR -24 238 167 219 204 0 0 chr17 35582719 35582773 -49855707 + (TG)n Simple_repeat Simple_repeat 2 55 0 318 364 16 16 chr17 35585004 35585133 -49853347 + L2 LINE L2 3138 3266 -6 258 303 151 3 chr17 35585390 35585528 -49852952 - MIR3 SINE MIR -72 136 7 1397 184 14 14 chr17 35587668 35587951 -49850529 + MLT1-int LTR MaLR 329 611 -760 908 195 21 3 chr17 35588078 35588272 -49850208 - MIR SINE MIR -56 206 14 516 265 169 0 chr17 35588273 35588409 -49850071 + MER5A DNA MER1_type 31 189 0 633 301 45 81 chr17 35588771 35589106 -49849374 + L2 LINE L2 2948 3270 -2 195 396 40 7 chr17 35592531 35592680 -49845800 + L2 LINE L2 2896 3049 -223 899 320 153 9 chr17 35593771 35594236 -49844244 - L3 LINE CR1 -65 1512 981 342 0 0 0 chr17 35594627 35594665 -49843815 + (CA)n Simple_repeat Simple_repeat 2 39 0 200 220 231 66 chr17 35594705 35594796 -49843684 + MIR3 SINE MIR 102 207 -1 284 349 9 9 chr17 35594864 35594970 -49843510 - MIR SINE MIR -113 149 44 31 58 0 0 chr17 35595297 35595349 -49843131 + GC_rich Low_complexity Low_complexity 1 52 0 277 307 40 20 chr17 35596314 35596415 -49842065 + MIR SINE MIR 112 214 -48 269 340 0 0 chr17 35596449 35596543 -49841937 - MIR SINE MIR -29 233 140 313 338 23 23 chr17 35596584 35596717 -49841763 - MIR SINE MIR -55 153 21 284 336 38 24 chr17 35597427 35597638 -49840842 + L2 LINE L2 2836 3049 -223 245 279 107 41 chr17 35598394 35598516 -49839964 + MIR SINE MIR 52 181 -81 855 273 53 43 chr17 35599016 35599433 -49839047 + L2 LINE L2 2892 3312 -1 291 278 87 0 chr17 35599413 35599528 -49838952 + L3 LINE CR1 1355 1479 -98 * 181 328 31 16 chr17 35599578 35599642 -49838838 - MIR SINE MIR -66 142 78 276 313 32 0 chr17 35599798 35599898 -49838582 + MIR SINE MIR 44 146 -77 207 0 0 0 chr17 35600293 35600316 -49838164 + (CA)n Simple_repeat Simple_repeat 2 24 0 2344 148 51 5 chr17 35600589 35600962 -49837518 + MLT1B LTR MaLR 1 390 0 182 204 68 23 chr17 35600974 35601018 -49837462 + MIR SINE MIR 103 148 -60 195 328 30 0 chr17 35602375 35602442 -49836038 + MER5B DNA MER1_type 75 143 -35 202 259 17 17 chr17 35602565 35602623 -49835857 + L2 LINE L2 3248 3305 -8 234 0 0 0 chr17 35602627 35602653 -49835827 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 212 210 48 32 chr17 35602861 35602923 -49835557 + L2 LINE L2 3243 3305 -8 216 0 0 0 chr17 35602925 35602949 -49835531 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 287 250 56 62 chr17 35603175 35603319 -49835161 + MIR3 SINE MIR 21 163 -45 1482 234 99 34 chr17 35603404 35603601 -49834879 + L1ME4a LINE L1 5486 5669 -452 1879 141 26 7 chr17 35603601 35603905 -49834575 + AluJo SINE Alu 1 310 -2 1482 234 99 34 chr17 35603905 35604304 -49834176 + L1ME4a LINE L1 5669 6121 0 680 219 101 48 chr17 35604386 35604597 -49833883 + MIR SINE MIR 20 245 -17 303 28 0 0 chr17 35604597 35604633 -49833847 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 680 219 101 48 chr17 35604633 35604649 -49833831 + MIR SINE MIR 245 259 -3 373 306 0 28 chr17 35604835 35604943 -49833537 + MIR SINE MIR 42 146 -62 495 312 98 29 chr17 35605098 35605271 -49833209 + MER91A DNA MER1_type 1 185 -11 619 275 14 55 chr17 35606056 35606274 -49832206 + MIR SINE MIR 51 259 -3 289 323 71 0 chr17 35606437 35606536 -49831944 + L2 LINE L2 3208 3313 0 315 0 0 0 chr17 35606580 35606615 -49831865 + (CA)n Simple_repeat Simple_repeat 2 36 0 272 234 64 21 chr17 35606986 35607080 -49831400 - MIR SINE MIR -86 122 25 206 376 8 8 chr17 35608449 35608582 -49829898 + GA-rich Low_complexity Low_complexity 2 134 0 309 26 0 0 chr17 35608920 35608958 -49829522 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 0 0 0 chr17 35608958 35608980 -49829500 + (GA)n Simple_repeat Simple_repeat 2 23 0 205 379 118 25 chr17 35609161 35609322 -49829158 - MIR SINE MIR -8 254 79 309 301 54 25 chr17 35609479 35609670 -49828810 - MIR SINE MIR -41 221 21 373 247 215 0 chr17 35610101 35610194 -49828286 - MER81 DNA DNA 0 114 2 339 288 63 9 chr17 35610346 35610457 -49828023 + MIR SINE MIR 96 212 -50 403 223 48 10 chr17 35610649 35610752 -49827728 - MIR3 SINE MIR -21 187 81 287 238 12 0 chr17 35610933 35611013 -49827467 + L2 LINE L2 2909 2989 -283 2759 147 33 0 chr17 35611065 35611547 -49826933 + MER41E LTR ERV1 15 512 0 386 367 45 41 chr17 35611574 35611819 -49826661 + L2 LINE L2 3027 3272 0 383 307 114 18 chr17 35611804 35611970 -49826510 - L2 LINE L2 -4 3309 3128 * 2213 252 37 74 chr17 35613848 35614688 -49823792 + MER21B LTR ERV1 1 809 -54 223 311 95 74 chr17 35614744 35614934 -49823546 + L2 LINE L2 3069 3262 -10 * 593 313 78 21 chr17 35614928 35615171 -49823309 + L3 LINE CR1 1314 1570 -7 208 319 0 14 chr17 35615205 35615277 -49823203 + GA-rich Low_complexity Low_complexity 1 71 0 302 283 214 13 chr17 35615555 35615714 -49822766 + MIR3 SINE MIR 3 193 -15 2328 93 0 6 chr17 35615758 35616070 -49822410 - AluSq SINE Alu -3 310 1 303 207 54 34 chr17 35616354 35616483 -49821997 + MLT1H LTR MaLR 369 448 -2 637 300 123 18 chr17 35617114 35617341 -49821139 + MIR SINE MIR 12 262 0 257 327 87 74 chr17 35617572 35617881 -49820599 - L2 LINE L2 -448 2866 2554 443 225 243 40 chr17 35617897 35618070 -49820410 + MIR SINE MIR 30 237 -25 243 239 0 45 chr17 35618743 35618810 -49819670 + MIR3 SINE MIR 118 181 -27 275 337 0 11 chr17 35619677 35619772 -49818708 - MIR3 SINE MIR -17 191 98 180 215 224 47 chr17 35620133 35620240 -49818240 + MIR SINE MIR 20 145 -63 333 0 0 0 chr17 35621669 35621706 -49816774 + (CA)n Simple_repeat Simple_repeat 1 37 0 220 175 0 0 chr17 35621894 35621934 -49816546 - L2 LINE L2 -4 3309 3270 259 288 25 0 chr17 35622203 35622283 -49816197 - MER5A DNA MER1_type -36 153 72 302 269 192 0 chr17 35622344 35622448 -49816032 + MER5B DNA MER1_type 2 125 -53 208 93 0 47 chr17 35622448 35622491 -49815989 + (TAAAAA)n Simple_repeat Simple_repeat 2 42 0 219 97 0 0 chr17 35622495 35622526 -49815954 + MER5B DNA MER1_type 148 178 0 424 256 31 75 chr17 35624119 35624279 -49814201 - MIR3 SINE MIR -26 182 30 258 158 0 88 chr17 35624614 35624671 -49813809 + L2 LINE L2 3221 3272 0 222 118 0 0 chr17 35625245 35625279 -49813201 + (T)n Simple_repeat Simple_repeat 1 34 0 345 292 97 0 chr17 35625720 35625864 -49812616 + MIR SINE MIR 47 204 -58 213 39 0 0 chr17 35626060 35626086 -49812394 + (TG)n Simple_repeat Simple_repeat 1 26 0 282 303 191 25 chr17 35626401 35626563 -49811917 + MIR3 SINE MIR 19 207 -1 337 271 196 7 chr17 35626748 35626951 -49811529 - MIR SINE MIR -14 248 4 208 333 97 0 chr17 35627170 35627242 -49811238 + L2 LINE L2 3173 3251 -21 1345 161 77 42 chr17 35627245 35627531 -49810949 + AluJo SINE Alu 15 310 -2 919 228 5 5 chr17 35627545 35627742 -49810738 - MIR SINE MIR 0 262 66 714 233 204 35 chr17 35627878 35628393 -49810087 - L2 LINE L2 0 3313 2685 738 202 17 34 chr17 35628674 35628852 -49809628 + MER33 DNA MER1_type 1 175 -149 771 165 30 15 chr17 35628874 35629007 -49809473 - AluJb SINE Alu -176 136 2 707 192 32 0 chr17 35629009 35629165 -49809315 + MER33 DNA MER1_type 164 324 0 249 319 133 24 chr17 35629384 35629550 -49808930 - MIR SINE MIR -1 261 78 189 333 22 11 chr17 35630235 35630325 -49808155 - MIR SINE MIR -111 151 61 1446 199 3 30 chr17 35630524 35630825 -49807655 + AluJo SINE Alu 3 295 -17 194 308 192 0 chr17 35631052 35631130 -49807350 - MIR SINE MIR -122 140 48 219 281 0 62 chr17 35631879 35631943 -49806537 + L2 LINE L2 3204 3263 -9 575 218 54 172 chr17 35632809 35633099 -49805381 + L2 LINE L2 2851 3055 -258 2008 103 0 40 chr17 35633099 35633400 -49805080 + AluSx SINE Alu 21 309 -3 575 218 54 172 chr17 35633400 35633627 -49804853 + L2 LINE L2 3055 3307 -6 391 361 79 34 chr17 35633667 35634074 -49804406 - L2 LINE L2 0 3272 2848 246 298 88 0 chr17 35635134 35635248 -49803232 + L3b LINE CR1 1263 1386 -197 189 0 0 0 chr17 35635830 35635851 -49802629 + (CA)n Simple_repeat Simple_repeat 2 22 0 426 331 38 0 chr17 35636060 35636217 -49802263 - MIR3 SINE MIR -10 198 36 204 235 104 52 chr17 35636512 35636627 -49801853 + MIR3 SINE MIR 47 167 -41 190 188 0 0 chr17 35637508 35637540 -49800940 - L2 LINE L2 -20 3252 3221 361 355 102 5 chr17 35637756 35638067 -49800413 - L2 LINE L2 -213 3059 2715 241 265 15 0 chr17 35638389 35638457 -49800023 - MIR SINE MIR -111 97 29 25 31 0 0 chr17 35640353 35640385 -49798095 + GC_rich Low_complexity Low_complexity 1 32 0 26 50 0 0 chr17 35640537 35640577 -49797903 + GC_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr17 35641019 35641040 -49797440 + GC_rich Low_complexity Low_complexity 1 21 0 309 308 0 0 chr17 35644539 35644617 -49793863 - L2 LINE L2 -56 3257 3180 269 315 11 0 chr17 35645626 35645715 -49792765 - MIR3 SINE MIR -2 206 117 814 294 16 16 chr17 35645887 35646132 -49792348 - MIR SINE MIR -2 260 16 1707 211 5 19 chr17 35646648 35647022 -49791458 - MLT1B LTR MaLR 0 390 22 303 267 19 57 chr17 35647027 35647060 -49791420 + MER94 DNA DNA 34 67 -67 1019 54 78 0 chr17 35647060 35647189 -49791291 + MER85 DNA T2_type 1 139 0 303 267 19 57 chr17 35647189 35647260 -49791220 + MER94 DNA DNA 67 134 0 325 372 51 20 chr17 35647262 35647458 -49791022 + MIR SINE MIR 58 259 -3 1146 299 71 47 chr17 35647468 35647991 -49790489 + L2 LINE L2 2773 3309 -4 391 248 0 28 chr17 35648730 35648839 -49789641 - MIR3 SINE MIR -52 156 51 217 353 126 0 chr17 35649203 35649322 -49789158 + L2 LINE L2 3180 3313 0 * 405 305 64 108 chr17 35649321 35649773 -49788707 - L2 LINE L2 -21 3251 2820 247 180 22 67 chr17 35650324 35650413 -49788067 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 359 301 77 13 chr17 35650756 35650912 -49787568 - MIR3 SINE MIR -10 198 33 212 389 22 54 chr17 35651237 35651317 -49787163 + L2 LINE L2 3135 3216 -97 2438 128 59 20 chr17 35651317 35651725 -49786755 + MSTB LTR MaLR 1 424 -2 212 389 22 54 chr17 35651725 35651829 -49786651 + L2 LINE L2 3216 3313 0 438 291 34 39 chr17 35651896 35652075 -49786405 - MIR SINE MIR -70 192 15 863 242 142 5 chr17 35652368 35652587 -49785893 + MIR SINE MIR 14 262 0 365 280 177 34 chr17 35653312 35653487 -49784993 - MIR SINE MIR -32 230 31 479 244 0 17 chr17 35655432 35655612 -49782868 + (CACCAT)n Simple_repeat Simple_repeat 4 180 0 361 310 9 0 chr17 35655617 35655730 -49782750 + (CAT)n Simple_repeat Simple_repeat 3 116 0 365 276 0 6 chr17 35655746 35655920 -49782560 + (CAT)n Simple_repeat Simple_repeat 1 173 0 377 222 15 54 chr17 35656009 35656120 -49782360 - MIR SINE MIR -9 199 76 350 358 40 0 chr17 35656279 35656430 -49782050 + MIR3 SINE MIR 41 197 -11 251 239 22 56 chr17 35656437 35656617 -49781863 + (CAGAGA)n Simple_repeat Simple_repeat 6 179 0 185 360 79 0 chr17 35657432 35657546 -49780934 + L2 LINE L2 2694 2816 -498 448 349 115 38 chr17 35658012 35658439 -49780041 + L2 LINE L2 2813 3272 0 209 366 40 46 chr17 35658426 35658729 -49779751 - L2 LINE L2 -874 2440 2140 * 456 285 113 14 chr17 35659176 35659397 -49779083 - MIR SINE MIR 0 262 20 769 266 124 35 chr17 35659537 35659909 -49778571 + MLT1I LTR MaLR 1 405 -4 721 279 8 8 chr17 35660244 35660492 -49777988 + MIR SINE MIR 15 261 -1 768 200 0 0 chr17 35660505 35660685 -49777795 + (CAT)n Simple_repeat Simple_repeat 1 180 0 325 264 20 40 chr17 35660710 35660859 -49777621 + MIR SINE MIR 60 203 -59 * 333 276 18 16 chr17 35660823 35661001 -49777479 - MIR SINE MIR -1 261 5 819 103 63 11 chr17 35661004 35661178 -49777302 + Tigger3(Golem) DNA MER2_type 2429 2611 -418 20656 119 18 4 chr17 35661360 35664345 -49774135 - Tigger3(Golem) DNA MER2_type 0 3029 1 492 48 0 0 chr17 35664589 35664652 -49773828 + (TG)n Simple_repeat Simple_repeat 1 63 0 219 36 0 0 chr17 35664651 35664679 -49773801 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 276 281 9 18 chr17 35664713 35664827 -49773653 + (TG)n Simple_repeat Simple_repeat 2 114 0 221 132 0 19 chr17 35665773 35665826 -49772654 + (CAGAGA)n Simple_repeat Simple_repeat 4 55 0 628 217 51 0 chr17 35666459 35666597 -49771883 - MIR SINE MIR -80 182 38 376 313 29 0 chr17 35667292 35667430 -49771050 + MIR SINE MIR 20 159 -51 409 281 65 81 chr17 35667679 35667864 -49770616 + MIR3 SINE MIR 27 208 0 225 94 0 0 chr17 35668570 35668602 -49769878 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 211 302 0 0 chr17 35668604 35668657 -49769823 - L2 LINE L2 -7 3306 3254 347 291 55 24 chr17 35668695 35668860 -49769620 - L2 LINE L2 -166 3106 2937 217 246 35 0 chr17 35668927 35668984 -49769496 - L2 LINE L2 -15 3298 3240 * 428 238 133 0 chr17 35668982 35669087 -49769393 + MIR SINE MIR 117 235 -27 353 332 71 22 chr17 35669447 35669759 -49768721 + L2 LINE L2 2734 3059 -213 252 155 0 20 chr17 35669799 35669849 -49768631 - HsTC2 DNA Tc2 -4 1894 53 243 61 0 0 chr17 35670013 35670046 -49768434 + (CAAT)n Simple_repeat Simple_repeat 1 33 0 1081 256 120 32 chr17 35670057 35670555 -49767925 - L2 LINE L2 -49 3264 2713 249 139 481 0 chr17 35670591 35670670 -49767810 + L2 LINE L2 3153 3269 -3 257 280 139 0 chr17 35671033 35671174 -49767306 - MIR SINE MIR -36 172 10 522 154 11 0 chr17 35671374 35671465 -49767015 + MIR SINE MIR 38 129 -79 697 292 97 89 chr17 35671744 35672370 -49766110 + L2 LINE L2 2580 3211 -61 404 222 101 0 chr17 35672473 35672572 -49765908 - L2 LINE L2 -5 3308 3200 209 160 0 20 chr17 35672801 35672851 -49765629 + CT-rich Low_complexity Low_complexity 2 50 0 354 273 55 67 chr17 35673153 35673238 -49765242 + MIR3 SINE MIR 2 86 -122 1561 196 0 31 chr17 35673238 35673524 -49764956 - AluJo SINE Alu -24 288 12 354 273 55 67 chr17 35673524 35673603 -49764877 + MIR3 SINE MIR 86 164 -44 539 239 18 61 chr17 35673849 35674012 -49764468 + MIR3 SINE MIR 2 157 -51 385 314 27 38 chr17 35674844 35675029 -49763451 - MIR3 SINE MIR -1 207 25 387 297 27 0 chr17 35675471 35675582 -49762898 + MIR3 SINE MIR 9 122 -86 276 209 45 60 chr17 35675792 35675859 -49762621 + MER91C DNA MER1_type 34 99 -41 513 291 19 25 chr17 35676408 35676566 -49761914 + MIR SINE MIR 53 209 -53 311 288 144 15 chr17 35676597 35676729 -49761751 - MIR3 SINE MIR -49 159 11 2559 138 7 2 chr17 35676746 35677160 -49761320 - L1MB3 LINE L1 0 6183 5768 213 279 16 16 chr17 35677377 35677438 -49761042 - MER5A DNA MER1_type 0 189 129 382 222 7 82 chr17 35678181 35678316 -49760164 + L2 LINE L2 2943 3067 -205 185 0 0 39 chr17 35678382 35678408 -49760072 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 358 185 67 0 chr17 35679314 35679403 -49759077 - L1MD3 LINE L1 -1 7994 7726 420 250 0 0 chr17 35680475 35680559 -49757921 - MIR SINE MIR -57 151 68 467 171 45 27 chr17 35681044 35681155 -49757325 - Charlie8 DNA MER1_type -2253 164 52 826 213 98 32 chr17 35681157 35681505 -49756975 + L1MC5 LINE L1 7537 7907 -54 2271 82 0 7 chr17 35681658 35681963 -49756517 + AluSc SINE Alu 1 303 0 1268 199 0 5 chr17 35681983 35682204 -49756276 + MER58A DNA MER1_type 2 221 -3 235 175 0 0 chr17 35682513 35682553 -49755927 + MIR SINE MIR 113 152 -110 358 306 58 8 chr17 35683040 35683161 -49755319 + MIR SINE MIR 130 256 -6 2157 120 0 19 chr17 35683310 35683665 -49754815 - AluSx SINE Alu 0 312 1 1570 175 3 58 chr17 35683665 35683974 -49754506 - AluJo SINE Alu -10 302 11 1195 168 53 5 chr17 35684145 35684353 -49754127 - MER20 DNA MER1_type 0 219 2 321 140 0 0 chr17 35684465 35684522 -49753958 + (ATG)n Simple_repeat Simple_repeat 3 59 0 196 373 49 29 chr17 35684709 35684811 -49753669 - MIR SINE MIR -61 147 60 670 201 191 16 chr17 35684963 35685152 -49753328 - MIR SINE MIR -39 223 2 714 244 120 26 chr17 35685597 35685831 -49752649 + MIR SINE MIR 6 258 -4 231 270 162 27 chr17 35686035 35686146 -49752334 + MLT1K LTR MaLR 209 334 -254 282 324 0 0 chr17 35686299 35686404 -49752076 + MLT1K LTR MaLR 484 588 0 3112 178 28 29 chr17 35687179 35687831 -49750649 + L1MB8 LINE L1 5526 6176 -2 227 275 44 0 chr17 35687846 35687937 -49750543 + HAL1 LINE L1 2413 2507 0 180 0 0 0 chr17 35687967 35687987 -49750493 + (A)n Simple_repeat Simple_repeat 1 20 0 435 316 59 15 chr17 35688007 35688143 -49750337 - MIR SINE MIR -108 154 13 307 243 131 19 chr17 35688603 35688710 -49749770 + MIR SINE MIR 93 211 -51 215 347 65 0 chr17 35688990 35689114 -49749366 + L2 LINE L2 3140 3271 -1 246 204 0 0 chr17 35689115 35689159 -49749321 - MIR3 SINE MIR -14 194 151 290 252 35 80 chr17 35689373 35689505 -49748975 - MIR SINE MIR -63 145 14 248 258 32 0 chr17 35689789 35689851 -49748629 + CT-rich Low_complexity Low_complexity 2 65 0 188 226 32 65 chr17 35689960 35690022 -49748458 - L2 LINE L2 -79 3234 3175 282 337 5 76 chr17 35690520 35690704 -49747776 + L2 LINE L2 3098 3268 -4 381 131 0 0 chr17 35691454 35691515 -49746965 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 552 186 10 0 chr17 35691614 35691711 -49746769 + MER5A DNA MER1_type 9 106 -83 630 264 84 0 chr17 35691928 35692095 -49746385 - MIR SINE MIR -1 261 81 303 387 50 0 chr17 35693222 35693403 -49745077 - MIR SINE MIR 0 262 73 359 215 0 0 chr17 35694035 35694100 -49744380 + MER91 DNA MER1_type 2 66 -74 215 222 0 0 chr17 35694284 35694320 -49744160 + L2 LINE L2 2987 3022 -250 320 254 76 25 chr17 35694493 35694611 -49743869 + L2 LINE L2 3185 3308 -5 516 257 85 52 chr17 35695317 35695554 -49742926 + MIR SINE MIR 8 261 -1 233 224 0 0 chr17 35695828 35695877 -49742603 + MIR SINE MIR 91 139 -123 196 262 24 0 chr17 35696456 35696507 -49741973 - MIR SINE MIR -98 164 113 194 143 0 0 chr17 35697335 35697363 -49741117 + MER5C DNA MER1_type 1 28 -296 287 326 107 55 chr17 35697677 35697987 -49740493 - L2 LINE L2 0 3272 2947 480 35 0 0 chr17 35698057 35698115 -49740365 + (GGAGA)n Simple_repeat Simple_repeat 4 61 0 670 229 279 38 chr17 35698184 35698424 -49740056 - MLT1G LTR MaLR 0 590 298 305 256 244 27 chr17 35698461 35698719 -49739761 + L2 LINE L2 2951 3264 -8 848 273 108 30 chr17 35698887 35699507 -49738973 + L2 LINE L2 2643 3313 0 267 219 268 0 chr17 35700468 35700550 -49737930 - L2 LINE L2 0 3313 3210 227 354 54 14 chr17 35700579 35700726 -49737754 - MIR SINE MIR -7 255 103 357 288 93 7 chr17 35700885 35701024 -49737456 - MIR SINE MIR -13 249 99 487 345 52 0 chr17 35701724 35701898 -49736582 - MIR3 SINE MIR -6 202 20 285 283 35 44 chr17 35701913 35702026 -49736454 + MIR SINE MIR 3 114 -148 404 280 55 48 chr17 35702312 35702485 -49735995 - MIR SINE MIR -48 160 10 288 243 27 94 chr17 35703041 35703216 -49735264 - MIR3 SINE MIR -16 192 28 469 177 2 3 chr17 35703758 35703844 -49734636 + MER5A DNA MER1_type 29 102 -76 366 311 67 8 chr17 35703906 35704040 -49734440 - MIR SINE MIR -36 172 31 519 339 62 15 chr17 35704483 35704743 -49733737 - L3 LINE CR1 -344 1233 962 335 281 46 48 chr17 35704978 35705146 -49733334 - MIR SINE MIR -62 146 31 817 303 26 4 chr17 35705748 35705982 -49732498 + MIR SINE MIR 9 247 -15 414 221 12 0 chr17 35705982 35706068 -49732412 + MIR3 SINE MIR 113 199 -9 388 243 35 38 chr17 35706204 35706368 -49732112 - MIR SINE MIR -46 216 60 656 284 233 6 chr17 35706613 35706944 -49731536 + L3 LINE CR1 981 1386 -191 746 139 64 35 chr17 35708106 35708279 -49730201 + MER53 DNA DNA 9 186 -3 426 282 16 8 chr17 35708526 35708650 -49729830 - MIR3 SINE MIR -69 139 15 470 274 252 23 chr17 35709025 35709331 -49729149 + L3 LINE CR1 1003 1378 -199 281 222 167 14 chr17 35709327 35709399 -49729081 + MIR SINE MIR 42 124 -84 * 214 293 56 153 chr17 35709828 35710169 -49728311 + L2 LINE L2 2915 3222 -50 579 305 151 4 chr17 35710186 35710465 -49728015 + L2 LINE L2 2994 3313 0 1222 281 181 8 chr17 35710514 35710988 -49727492 + MLT1K LTR MaLR 33 588 0 263 220 68 0 chr17 35711026 35711085 -49727395 + L2 LINE L2 3249 3311 -2 587 228 108 42 chr17 35711676 35711917 -49726563 - L1MC5 LINE L1 -36 7925 7669 360 64 0 0 chr17 35712189 35712236 -49726244 + (GA)n Simple_repeat Simple_repeat 2 48 0 400 253 39 65 chr17 35712267 35712421 -49726059 + MLT1G1 LTR MaLR 441 590 -5 1480 208 150 83 chr17 35712438 35713317 -49725163 - L1MC5 LINE L1 -297 7664 6727 210 267 207 22 chr17 35713793 35713928 -49724552 + MIR SINE MIR 43 202 -60 978 93 0 0 chr17 35713958 35714097 -49724383 + (TTTCC)n Simple_repeat Simple_repeat 4 142 0 783 32 0 0 chr17 35714098 35714192 -49724288 + (TTTC)n Simple_repeat Simple_repeat 3 96 0 1871 119 45 4 chr17 35714192 35714461 -49724019 - AluJo SINE Alu -32 280 1 271 265 0 0 chr17 35714793 35714861 -49723619 - MIR SINE MIR 0 262 195 1406 264 40 18 chr17 35714868 35715364 -49723116 + L2 LINE L2 2583 3102 -211 285 288 0 0 chr17 35715374 35715447 -49723033 + L2 LINE L2 3241 3313 0 256 254 101 72 chr17 35715450 35715588 -49722892 - MIR SINE MIR -64 198 57 2617 194 91 52 chr17 35716152 35716929 -49721551 - L1ME1 LINE L1 -20 6146 5339 401 306 41 53 chr17 35717134 35717304 -49721176 - MIR3 SINE MIR -25 183 16 402 263 153 24 chr17 35718586 35718770 -49719710 + MIR SINE MIR 3 208 -54 281 389 42 6 chr17 35719054 35719221 -49719259 - MIR3 SINE MIR -6 202 30 192 158 0 0 chr17 35719593 35719631 -49718849 + (CAG)n Simple_repeat Simple_repeat 2 39 0 582 63 0 0 chr17 35719813 35719892 -49718588 + (TCCA)n Simple_repeat Simple_repeat 1 79 0 683 237 81 15 chr17 35719992 35720190 -49718290 + LTR33 LTR ERVL 1 211 -310 330 276 41 0 chr17 35720418 35720516 -49717964 + MIR SINE MIR 81 182 -80 207 336 45 18 chr17 35720512 35720622 -49717858 - MIR SINE MIR -141 121 9 * 423 245 50 14 chr17 35720993 35721132 -49717348 - MIR SINE MIR -45 217 74 196 325 218 19 chr17 35721269 35721577 -49716903 + L2 LINE L2 1589 1957 -1357 1363 255 72 14 chr17 35721583 35722217 -49716263 - L2 LINE L2 0 3313 2648 288 327 112 52 chr17 35722255 35723248 -49715232 + L2 LINE L2 2005 3104 -168 575 315 52 14 chr17 35723253 35723466 -49715014 - MIR SINE MIR -13 249 29 316 283 145 22 chr17 35723508 35723646 -49714834 + L2 LINE L2 3115 3269 -3 391 240 68 27 chr17 35724591 35724737 -49713743 - MIR3 SINE MIR -11 197 46 345 47 0 0 chr17 35725219 35725262 -49713218 + (TG)n Simple_repeat Simple_repeat 1 43 0 220 278 56 33 chr17 35726210 35726300 -49712180 - L2 LINE L2 -22 3250 3159 300 335 74 17 chr17 35726388 35726564 -49711916 - MIR3 SINE MIR -3 205 20 192 184 20 20 chr17 35726740 35726789 -49711691 - L2 LINE L2 0 3272 3224 777 241 42 51 chr17 35728148 35728384 -49710096 - MIR SINE MIR -1 261 28 197 195 73 0 chr17 35729027 35729068 -49709412 - L2 LINE L2 -19 3253 3210 422 231 19 81 chr17 35729436 35729596 -49708884 + MIR3 SINE MIR 5 154 -54 583 221 93 47 chr17 35729701 35729873 -49708607 + MIR SINE MIR 63 242 -20 186 103 0 0 chr17 35729906 35729935 -49708545 + (TCC)n Simple_repeat Simple_repeat 2 30 0 209 305 0 17 chr17 35730400 35730459 -49708021 + MIR3 SINE MIR 125 182 -26 520 295 22 0 chr17 35730705 35730844 -49707636 + MIR3 SINE MIR 44 185 -23 195 162 0 0 chr17 35731021 35731058 -49707422 + CT-rich Low_complexity Low_complexity 1 37 0 186 43 0 0 chr17 35731571 35731594 -49706886 + (TAA)n Simple_repeat Simple_repeat 1 23 0 794 245 77 34 chr17 35731595 35731828 -49706652 - MIR SINE MIR -8 254 12 31 0 0 0 chr17 35732212 35732243 -49706237 + AT_rich Low_complexity Low_complexity 1 31 0 184 0 30 61 chr17 35732962 35732995 -49705485 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 958 182 13 0 chr17 35734797 35734956 -49703524 + FRAM SINE Alu 3 163 -13 209 226 43 11 chr17 35735020 35735113 -49703367 + (TA)n Simple_repeat Simple_repeat 2 97 0 285 227 192 17 chr17 35735126 35735298 -49703182 - L1M4 LINE L1 -3477 2669 2468 2450 71 0 19 chr17 35735298 35735609 -49702871 - AluY SINE Alu -6 305 1 383 287 110 43 chr17 35735626 35735725 -49702755 - L1M4 LINE L1 -2697 3449 3358 2123 87 4 0 chr17 35735725 35735989 -49702491 - AluSc SINE Alu -6 303 39 383 287 110 43 chr17 35735989 35736098 -49702382 - L1M4 LINE L1 -2788 3358 3227 576 99 0 12 chr17 35736099 35736180 -49702300 - AluSc SINE Alu -13 296 217 234 0 0 0 chr17 35736609 35736635 -49701845 + (CA)n Simple_repeat Simple_repeat 2 27 0 182 154 0 77 chr17 35736635 35736726 -49701754 + (TA)n Simple_repeat Simple_repeat 1 84 0 324 214 48 36 chr17 35736790 35736874 -49701606 - L1MC4 LINE L1 -1339 6703 6619 2275 101 7 0 chr17 35737325 35737623 -49700857 - AluSp SINE Alu -13 300 1 1931 132 15 0 chr17 35737634 35737907 -49700573 - AluSc SINE Alu -14 295 19 2175 135 0 0 chr17 35738063 35738359 -49700121 - AluSx SINE Alu -14 298 3 1830 168 25 0 chr17 35739046 35739331 -49699149 + AluJb SINE Alu 1 292 -20 524 261 149 63 chr17 35739950 35740172 -49698308 + MIR SINE MIR 3 243 -19 2429 97 3 0 chr17 35741070 35741379 -49697101 + AluSg SINE Alu 1 310 0 713 216 25 10 chr17 35741381 35741580 -49696900 + LOR1-int LTR ERV1 1839 2040 -6080 966 193 39 43 chr17 35741589 35741822 -49696658 - MER50 LTR ERV1 -1 733 502 2287 112 6 6 chr17 35741855 35742168 -49696312 + AluSq SINE Alu 1 313 0 442 185 47 57 chr17 35742181 35742303 -49696177 + L1P5 LINE L1 5315 5437 -727 1778 96 112 0 chr17 35742303 35742608 -49695872 + AluSg SINE Alu 1 333 0 442 185 47 57 chr17 35742608 35742669 -49695811 + L1P5 LINE L1 5437 5497 -667 474 321 64 0 chr17 35743427 35743614 -49694866 + MIR SINE MIR 46 244 -18 * 615 250 77 12 chr17 35743611 35743779 -49694701 - MIR SINE MIR -49 213 35 394 274 48 43 chr17 35743984 35744119 -49694361 + MIR SINE MIR 30 161 -60 392 241 60 35 chr17 35744116 35744232 -49694248 + MIR SINE MIR 18 136 -126 * 873 216 132 13 chr17 35744289 35744516 -49693964 + MIR SINE MIR 3 256 -6 587 227 45 56 chr17 35745460 35745658 -49692822 + MIR SINE MIR 47 242 -20 3015 159 30 40 chr17 35746449 35746513 -49691967 - L1MB2 LINE L1 0 6171 6108 2025 152 3 3 chr17 35746513 35746822 -49691658 - AluJb SINE Alu -3 309 1 3015 159 30 40 chr17 35746822 35747362 -49691118 - L1MB2 LINE L1 -63 6108 5573 193 297 68 14 chr17 35747777 35747851 -49690629 + MIR3 SINE MIR 115 192 -16 336 260 32 69 chr17 35748539 35748699 -49689781 - MIR SINE MIR -58 150 3 278 252 35 47 chr17 35748780 35748919 -49689561 + MIR SINE MIR 31 162 -89 234 279 156 7 chr17 35749185 35749339 -49689141 - MIR3 SINE MIR -11 197 21 711 304 51 5 chr17 35750566 35750780 -49687700 + MIR SINE MIR 21 244 -18 283 385 47 7 chr17 35750788 35750936 -49687544 + L2 LINE L2 3106 3259 -13 201 74 0 0 chr17 35750936 35750963 -49687517 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 381 310 94 35 chr17 35750969 35751140 -49687340 + L3 LINE CR1 1395 1575 -2 227 308 187 0 chr17 35751294 35751401 -49687079 + L2 LINE L2 3146 3272 0 1860 169 3 0 chr17 35752137 35752527 -49685953 + AluJb SINE Alu 1 391 0 244 351 54 12 chr17 35752542 35752710 -49685770 - MIR3 SINE MIR -11 197 23 585 293 37 16 chr17 35754023 35754386 -49684094 - HAL1 LINE L1 -47 2460 2069 235 174 0 22 chr17 35754443 35754489 -49683991 + MLT1J2 LTR MaLR 67 111 -339 1418 272 127 18 chr17 35754812 35755433 -49683047 - HAL1 LINE L1 -566 1941 1253 327 279 145 88 chr17 35755486 35755769 -49682711 - MLT1H LTR MaLR -13 536 238 853 147 7 0 chr17 35755775 35755911 -49682569 + MER66B LTR ERV1 350 486 0 568 301 86 5 chr17 35755912 35756098 -49682382 + MIR SINE MIR 32 232 -30 210 233 0 0 chr17 35756717 35756760 -49681720 - MIR SINE MIR -61 147 105 546 247 66 18 chr17 35757274 35757440 -49681040 + MIR SINE MIR 89 262 0 429 250 44 106 chr17 35757512 35757692 -49680788 + MER5B DNA MER1_type 4 172 -6 334 290 74 40 chr17 35758025 35758201 -49680279 - MIR3 SINE MIR -22 186 5 269 314 29 39 chr17 35759584 35759686 -49678794 + MIR SINE MIR 41 141 -67 289 224 206 28 chr17 35759970 35760077 -49678403 + L2 LINE L2 3147 3272 0 778 266 148 0 chr17 35760199 35760455 -49678025 - MLT1I LTR MaLR -15 394 101 256 236 69 0 chr17 35760471 35760543 -49677937 - MLT1J2 LTR MaLR -276 174 98 * 374 284 35 21 chr17 35760532 35760673 -49677807 - MLT1I LTR MaLR -261 148 6 232 371 114 0 chr17 35760834 35760939 -49677541 - L2 LINE L2 -17 3255 3139 264 233 0 0 chr17 35761373 35761446 -49677034 + GA-rich Low_complexity Low_complexity 4 76 0 2256 116 55 19 chr17 35761514 35761875 -49676605 + THE1C LTR MaLR 1 374 -1 389 331 90 39 chr17 35762058 35762552 -49675928 + L2 LINE L2 2739 3272 0 228 306 48 0 chr17 35762560 35762622 -49675858 - L3 LINE CR1 -20 1557 1493 846 220 86 0 chr17 35762628 35762814 -49675666 + MER58A DNA MER1_type 1 202 -22 27 0 0 0 chr17 35763103 35763130 -49675350 + AT_rich Low_complexity Low_complexity 1 27 0 183 361 0 0 chr17 35763235 35763296 -49675184 - L3 LINE CR1 -194 1383 1323 236 360 54 18 chr17 35763566 35763677 -49674803 + L3 LINE CR1 345 459 -1118 300 296 151 16 chr17 35763798 35763984 -49674496 - MIR SINE MIR -32 230 20 199 320 160 10 chr17 35764173 35764273 -49674207 + L3 LINE CR1 1083 1197 -380 228 303 89 76 chr17 35765152 35765466 -49673014 - L2 LINE L2 -410 2904 2587 960 215 25 5 chr17 35766486 35766686 -49671794 + MER63A DNA MER1_type 7 210 0 351 299 54 54 chr17 35767319 35767486 -49670994 + MIR3 SINE MIR 1 167 -41 591 195 86 23 chr17 35768369 35768543 -49669937 + L3 LINE CR1 1348 1532 -45 278 222 0 0 chr17 35768583 35768637 -49669843 + MIR SINE MIR 191 244 -18 185 267 22 0 chr17 35768650 35768695 -49669785 + L3 LINE CR1 1510 1555 -22 240 366 56 7 chr17 35770439 35770581 -49667899 + MIR3 SINE MIR 11 159 -49 255 288 12 0 chr17 35770674 35770754 -49667726 - MER103 DNA DNA -75 91 11 181 278 226 9 chr17 35770922 35771037 -49667443 - MIR SINE MIR -21 241 102 241 236 73 0 chr17 35771223 35771278 -49667202 + MIR SINE MIR 9 67 -195 313 250 52 10 chr17 35771750 35771846 -49666634 + MIR SINE MIR 84 183 -79 191 304 176 10 chr17 35773055 35773157 -49665323 + MIR SINE MIR 35 153 -109 340 257 48 38 chr17 35774163 35774268 -49664212 - L2 LINE L2 0 3313 3208 276 211 53 53 chr17 35775187 35775282 -49663198 - MIR SINE MIR -77 131 37 420 351 87 11 chr17 35775969 35776154 -49662326 - MIR SINE MIR -44 218 20 470 288 89 16 chr17 35776323 35776514 -49661966 - MIR SINE MIR -47 215 11 376 339 42 5 chr17 35777439 35777628 -49660852 + L2 LINE L2 2671 2866 -448 342 323 51 71 chr17 35777674 35777968 -49660512 + L2 LINE L2 2931 3218 -54 533 208 149 0 chr17 35777973 35778123 -49660357 + MER5A DNA MER1_type 4 178 -11 208 289 183 10 chr17 35778379 35778483 -49659997 - MIR SINE MIR -89 173 52 265 278 76 62 chr17 35778956 35779100 -49659380 - MIR3 SINE MIR -15 193 48 695 272 10 63 chr17 35779179 35779441 -49659039 - MIR SINE MIR -2 260 11 320 261 32 83 chr17 35780045 35780202 -49658278 + MIR SINE MIR 68 216 -46 1827 270 53 72 chr17 35780365 35781306 -49657174 + L1ME LINE L1 6 794 -5188 275 320 20 61 chr17 35781307 35781454 -49657026 - MIR SINE MIR -111 151 11 1394 250 84 5 chr17 35782335 35782763 -49655717 + L1ME3A LINE L1 5706 6167 -3 220 299 63 5 chr17 35782923 35783037 -49655443 - MIR SINE MIR -61 147 41 304 273 86 50 chr17 35783208 35783347 -49655133 + MIR3 SINE MIR 51 194 -14 228 295 0 64 chr17 35783494 35783572 -49654908 - L2 LINE L2 0 3272 3200 309 322 21 42 chr17 35783675 35783818 -49654662 - L2 LINE L2 -216 3056 2917 384 267 185 15 chr17 35784697 35784832 -49653648 - MER5B DNA MER1_type -19 159 2 425 293 9 9 chr17 35784834 35784950 -49653530 + L2 LINE L2 3149 3264 -8 266 300 59 41 chr17 35785098 35785268 -49653212 - MIR SINE MIR -72 190 18 226 322 51 17 chr17 35785449 35785567 -49652913 + MIR3 SINE MIR 2 123 -85 26 0 0 0 chr17 35786478 35786504 -49651976 + AT_rich Low_complexity Low_complexity 1 26 0 205 279 127 38 chr17 35788164 35788243 -49650237 - MIR3 SINE MIR -32 176 91 521 300 100 38 chr17 35788409 35788649 -49649831 + MIR SINE MIR 1 255 -7 352 347 53 76 chr17 35788678 35788940 -49649540 + L2 LINE L2 2994 3249 -23 248 275 14 14 chr17 35789711 35789780 -49648700 + GA-rich Low_complexity Low_complexity 3 71 0 434 287 61 39 chr17 35789832 35790013 -49648467 + MIR SINE MIR 28 212 -50 278 261 23 11 chr17 35790271 35790359 -49648121 - MIR3 SINE MIR -52 156 68 370 317 46 62 chr17 35790493 35790752 -49647728 + MIR SINE MIR 8 262 0 645 101 0 0 chr17 35791334 35791433 -49647047 + (TCCA)n Simple_repeat Simple_repeat 4 102 0 198 339 92 73 chr17 35791464 35791682 -49646798 - L2 LINE L2 -50 3222 3001 264 30 0 0 chr17 35792174 35792207 -49646273 + (TG)n Simple_repeat Simple_repeat 1 33 0 239 0 32 0 chr17 35792206 35792237 -49646243 + (GA)n Simple_repeat Simple_repeat 1 32 0 * 2562 70 0 0 chr17 35793072 35793374 -49645106 + AluY SINE Alu 6 307 -4 260 325 60 20 chr17 35793590 35793741 -49644739 - MIR SINE MIR -22 240 84 286 234 142 2 chr17 35794281 35794403 -49644077 - MIR SINE MIR -65 143 45 381 274 150 16 chr17 35794844 35795084 -49643396 + L2 LINE L2 2747 3018 -254 298 284 34 11 chr17 35795285 35795373 -49643107 + MIR SINE MIR 104 193 -69 198 302 63 40 chr17 35795518 35795644 -49642836 + MIR SINE MIR 46 174 -88 428 264 32 45 chr17 35796248 35796403 -49642077 + MIR SINE MIR 63 215 -47 726 273 16 5 chr17 35796440 35796634 -49641846 + MIR SINE MIR 7 202 -60 250 287 49 25 chr17 35797066 35797188 -49641292 + LTR67 LTR ERVL 428 552 -5 504 333 52 0 chr17 35797256 35797430 -49641050 + MIR SINE MIR 65 247 -15 351 248 17 44 chr17 35797684 35797874 -49640606 + GA-rich Low_complexity Low_complexity 1 184 0 238 316 105 18 chr17 35798159 35798273 -49640207 + MIR SINE MIR 47 170 -92 373 16 95 31 chr17 35799746 35799810 -49638670 + L1PA8 LINE L1 6081 6147 -7 1443 165 34 79 chr17 35800327 35800390 -49638090 - MLT1A1 LTR MaLR 0 365 301 2006 105 3 34 chr17 35800390 35800715 -49637765 + AluSq SINE Alu 1 316 0 1443 165 34 79 chr17 35800715 35801031 -49637449 - MLT1A1 LTR MaLR -64 301 2 2186 73 0 0 chr17 35801463 35801723 -49636757 - AluY SINE Alu -51 260 1 1088 203 58 120 chr17 35801936 35802335 -49636145 - MLT1A2 LTR MaLR 0 374 1 1898 285 92 47 chr17 35802623 35803693 -49634787 + L2 LINE L2 2195 3313 0 3197 197 40 36 chr17 35803693 35804447 -49634033 + L1MB7 LINE L1 5376 6135 -49 2348 94 0 19 chr17 35804447 35804756 -49633724 + AluY SINE Alu 1 303 -8 3197 197 40 36 chr17 35804756 35804804 -49633676 + L1MB7 LINE L1 6135 6181 -3 225 0 0 0 chr17 35805080 35805105 -49633375 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 502 298 42 47 chr17 35805671 35805886 -49632594 - MIR SINE MIR -18 244 31 289 200 0 125 chr17 35806654 35806734 -49631746 + MLT1I LTR MaLR 70 135 -274 244 309 144 39 chr17 35807191 35807372 -49631108 - L2 LINE L2 -177 3095 2896 23 0 0 0 chr17 35807468 35807491 -49630989 + AT_rich Low_complexity Low_complexity 1 23 0 201 260 0 41 chr17 35808993 35809066 -49629414 + CT-rich Low_complexity Low_complexity 4 73 0 1382 48 0 0 chr17 35809306 35809473 -49629007 - L1PA4 LINE L1 -5 6150 5984 2495 14 0 0 chr17 35809473 35809764 -49628716 + L1PA4 LINE L1 5683 5973 -182 886 268 71 4 chr17 35810168 35810405 -49628075 - MIR SINE MIR -1 261 9 223 342 53 18 chr17 35810405 35810519 -49627961 - MER5A DNA MER1_type 0 189 72 517 298 53 27 chr17 35810893 35811081 -49627399 + MIR SINE MIR 70 262 0 * 1012 291 4 0 chr17 35811038 35811279 -49627201 - MIR SINE MIR -5 257 16 471 257 117 40 chr17 35811469 35811691 -49626789 - L2 LINE L2 0 3313 3075 2530 224 86 40 chr17 35811703 35812545 -49625935 - L2 LINE L2 -361 2953 2074 369 277 107 124 chr17 35812732 35812867 -49625613 - L2 LINE L2 0 3272 3136 963 159 87 48 chr17 35812867 35813074 -49625406 + MER20 DNA MER1_type 1 215 -4 369 277 107 124 chr17 35813074 35813350 -49625130 - L2 LINE L2 -136 3136 2868 491 285 38 0 chr17 35813779 35813937 -49624543 + MIR3 SINE MIR 38 201 -7 303 314 29 20 chr17 35814656 35814758 -49623722 - MIR3 SINE MIR -47 161 59 449 281 38 25 chr17 35814888 35815277 -49623203 - L1ME4a LINE L1 -30 6091 5650 612 301 98 59 chr17 35815538 35816097 -49622383 - MLT1K LTR MaLR -3 585 5 723 235 37 123 chr17 35816802 35817190 -49621290 - MLT1J1 LTR MaLR -6 440 99 2315 105 0 0 chr17 35817190 35817485 -49620995 + AluSx SINE Alu 1 295 -17 723 235 37 123 chr17 35817485 35817577 -49620903 - MLT1J1 LTR MaLR -347 99 1 432 67 0 0 chr17 35819382 35819442 -49619038 + (CA)n Simple_repeat Simple_repeat 2 61 0 470 364 85 26 chr17 35819958 35820419 -49618061 - L1ME LINE L1 -355 5807 5320 272 415 0 6 chr17 35821456 35821620 -49616860 + L2 LINE L2 1045 1207 -2107 379 314 109 25 chr17 35821737 35822059 -49616421 + L2 LINE L2 1543 1891 -1423 3118 133 9 11 chr17 35822138 35823377 -49615103 - L1PA13 LINE L1 -11 6152 4842 486 198 30 10 chr17 35823544 35823645 -49614835 + MIR SINE MIR 25 127 -135 224 226 98 43 chr17 35823853 35824017 -49614463 + L2 LINE L2 2447 2619 -695 1781 153 13 7 chr17 35824087 35824388 -49614092 + AluJo SINE Alu 2 304 -8 288 296 187 60 chr17 35824448 35824796 -49613684 + L2 LINE L2 2872 3263 -9 211 312 9 55 chr17 35825040 35825149 -49613331 - L2 LINE L2 -208 3064 2961 201 74 0 0 chr17 35825541 35825568 -49612912 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2608 19 7 3 chr17 35825757 35826067 -49612413 - AluY SINE Alu 0 311 1 263 255 147 52 chr17 35826099 35826425 -49612055 + L1M4 LINE L1 2805 3161 -2985 362 284 14 68 chr17 35826456 35826604 -49611876 - MER5A DNA MER1_type 0 189 50 325 284 0 67 chr17 35826487 35826621 -49611859 + MER5A DNA MER1_type 43 167 -22 * 1815 117 81 0 chr17 35827109 35827382 -49611098 - AluSx SINE Alu -17 295 1 248 262 16 0 chr17 35827430 35827491 -49610989 + MLT1K LTR MaLR 527 588 0 1934 138 10 0 chr17 35827697 35827994 -49610486 - AluSx SINE Alu -12 300 1 333 294 49 42 chr17 35828694 35828837 -49609643 + MLT1J1 LTR MaLR 19 162 -284 367 326 44 30 chr17 35829489 35829624 -49608856 - L2 LINE L2 0 3272 3136 392 217 152 0 chr17 35830296 35830388 -49608092 + MIR SINE MIR 79 184 -78 378 270 0 17 chr17 35830388 35830503 -49607977 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 242 289 67 0 chr17 35830503 35830593 -49607887 - L1MC4 LINE L1 -1333 6709 6614 219 36 0 0 chr17 35830593 35830621 -49607859 + (TA)n Simple_repeat Simple_repeat 2 29 0 266 281 12 81 chr17 35831260 35831420 -49607060 + MER5A DNA MER1_type 21 169 -20 207 318 12 12 chr17 35831606 35831691 -49606789 - MIR SINE MIR 0 262 178 199 301 106 8 chr17 35831825 35831948 -49606532 - L2 LINE L2 -585 2729 2595 431 285 95 25 chr17 35831967 35832125 -49606355 - MIR SINE MIR -81 181 13 249 250 31 16 chr17 35832408 35832472 -49606008 - L2 LINE L2 0 3313 3249 425 218 64 18 chr17 35832992 35833102 -49605378 + MIR SINE MIR 71 185 -77 434 355 57 26 chr17 35833477 35833742 -49604738 - L1ME4a LINE L1 -125 5996 5724 777 246 148 5 chr17 35834054 35834257 -49604223 - MIR SINE MIR 0 262 31 300 354 57 19 chr17 35834247 35834405 -49604075 + MIR SINE MIR 29 192 -70 * 292 246 0 0 chr17 35835565 35835626 -49602854 - L2 LINE L2 0 3313 3253 580 304 40 40 chr17 35835979 35836226 -49602254 + MIR SINE MIR 11 257 -5 188 200 17 0 chr17 35836610 35836670 -49601810 + GA-rich Low_complexity Low_complexity 1 61 0 2996 237 120 46 chr17 35837691 35838101 -49600379 + L2 LINE L2 1783 2161 -1152 383 169 26 0 chr17 35838101 35838178 -49600302 - MER116 DNA Mariner -1 79 1 2996 237 120 46 chr17 35838178 35838923 -49599557 + L2 LINE L2 2161 3024 -289 2041 124 0 10 chr17 35838923 35839222 -49599258 + AluSx SINE Alu 1 296 -16 2996 237 120 46 chr17 35839222 35839290 -49599190 + L2 LINE L2 3024 3086 -227 397 260 147 54 chr17 35839611 35839869 -49598611 - L2 LINE L2 -32 3281 3000 353 295 39 32 chr17 35839903 35840059 -49598421 + MLT1K LTR MaLR 188 344 -244 336 24 0 0 chr17 35840778 35840819 -49597661 + (CA)n Simple_repeat Simple_repeat 2 42 0 363 325 49 20 chr17 35840842 35841045 -49597435 - L1MC4a LINE L1 -1889 5919 5711 1000 231 168 40 chr17 35841502 35841931 -49596549 + MLT1J LTR MaLR 28 511 0 560 285 20 20 chr17 35842053 35842204 -49596276 + MIR3 SINE MIR 37 187 -21 193 323 129 32 chr17 35842323 35842478 -49596002 + L2 LINE L2 3101 3270 -2 219 390 122 5 chr17 35842650 35842855 -49595625 + MIR SINE MIR 20 248 -14 379 319 68 18 chr17 35843429 35843592 -49594888 + MIR SINE MIR 34 204 -58 351 327 55 0 chr17 35843630 35843740 -49594740 - MIR SINE MIR -73 189 74 1776 139 17 0 chr17 35844597 35844891 -49593589 - AluSx SINE Alu 0 312 14 1367 196 8 4 chr17 35844901 35845188 -49593292 - AluJo SINE Alu 0 309 22 392 316 22 7 chr17 35845207 35845343 -49593137 - MIR3 SINE MIR -62 146 9 331 224 113 33 chr17 35845463 35845596 -49592884 - MIR SINE MIR -67 195 47 525 261 149 63 chr17 35846419 35846641 -49591839 - MIR SINE MIR -19 243 3 1308 212 51 0 chr17 35847996 35848288 -49590192 + AluJo SINE Alu 1 307 -5 297 51 0 0 chr17 35848297 35848336 -49590144 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 262 293 35 26 chr17 35849025 35849141 -49589339 + L1MC/D LINE L1 5607 5723 -2085 674 175 140 35 chr17 35849997 35850168 -49588312 - MER5A DNA MER1_type 0 189 1 357 93 0 0 chr17 35850394 35850448 -49588032 + (GA)n Simple_repeat Simple_repeat 1 54 0 444 266 141 21 chr17 35850847 35851039 -49587441 + MIR SINE MIR 14 228 -34 2008 97 38 0 chr17 35851096 35851385 -49587095 + AluSq SINE Alu 1 300 -13 391 239 87 27 chr17 35851584 35851768 -49586712 + L1 LINE L1 4881 5075 -1071 2099 58 38 45 chr17 35851778 35852125 -49586355 - L1PA8 LINE L1 0 6172 5861 198 150 0 0 chr17 35854638 35854678 -49583802 + (T)n Simple_repeat Simple_repeat 1 40 0 534 238 27 131 chr17 35855204 35855283 -49583197 + MLT1I LTR MaLR 62 148 -261 2343 64 7 0 chr17 35855283 35855579 -49582901 + AluY SINE Alu 1 298 -13 534 238 27 131 chr17 35855579 35855873 -49582607 + MLT1I LTR MaLR 148 396 -13 418 238 70 87 chr17 35856823 35857167 -49581313 + L1ME3 LINE L1 5619 5956 -214 472 312 14 14 chr17 35857400 35857538 -49580942 - MIR3 SINE MIR -6 202 65 532 308 106 62 chr17 35857620 35857900 -49580580 + L2 LINE L2 2469 2770 -544 1978 137 3 10 chr17 35857900 35858213 -49580267 - AluSx SINE Alu 0 312 2 532 308 106 62 chr17 35858213 35858289 -49580191 + L2 LINE L2 2770 2841 -473 374 302 47 0 chr17 35858290 35858419 -49580061 + LTR16C LTR ERVL 324 458 -33 369 321 236 20 chr17 35858460 35858765 -49579715 + L2 LINE L2 2943 3313 0 197 293 91 10 chr17 35859519 35859618 -49578862 + MIR SINE MIR 82 188 -74 822 280 73 5 chr17 35860606 35860824 -49577656 + MIR SINE MIR 28 260 -2 521 303 92 3 chr17 35860849 35861153 -49577327 - L2 LINE L2 -1184 2130 1800 384 252 27 27 chr17 35862050 35862161 -49576319 + MER45A DNA AcHobo 68 178 0 373 288 82 22 chr17 35862416 35862600 -49575880 - MIR SINE MIR -29 233 39 311 308 83 26 chr17 35863196 35863352 -49575128 + MIR3 SINE MIR 21 185 -23 405 273 149 0 chr17 35864069 35864190 -49574290 - MIR3 SINE MIR -48 160 22 653 222 155 26 chr17 35864533 35864727 -49573753 - MIR SINE MIR -31 231 13 252 0 0 0 chr17 35864810 35864838 -49573642 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 187 206 0 0 chr17 35865315 35865349 -49573131 - L2 LINE L2 -339 2975 2942 267 210 173 12 chr17 35866096 35866177 -49572303 + L2 LINE L2 3214 3307 -6 832 65 0 9 chr17 35866290 35866422 -49572058 - AluSg/x SINE Alu 0 309 179 228 256 156 22 chr17 35866481 35866571 -49571909 - MIR SINE MIR -69 139 38 1332 77 10 3 chr17 35867570 35867770 -49570710 + L1P3 LINE L1 5605 5799 -355 361 113 0 0 chr17 35867744 35867797 -49570683 + L1PA11 LINE L1 6121 6173 -1 * 290 272 168 24 chr17 35867994 35868119 -49570361 + MIR3 SINE MIR 18 160 -48 192 315 105 49 chr17 35868425 35868587 -49569893 - L2 LINE L2 -229 3043 2873 1645 149 40 20 chr17 35869053 35869355 -49569125 + AluJo SINE Alu 1 308 -4 750 101 84 0 chr17 35869361 35869480 -49569000 + FRAM SINE Alu 44 172 -4 256 333 97 0 chr17 35870753 35870867 -49567613 + MIR SINE MIR 60 184 -78 375 290 65 45 chr17 35871248 35871403 -49567077 - MIR3 SINE MIR -14 194 37 197 245 97 110 chr17 35872001 35872156 -49566324 + MIR SINE MIR 20 172 -90 245 294 182 21 chr17 35872189 35872332 -49566148 - MIR SINE MIR -36 226 61 245 135 19 0 chr17 35872388 35872440 -49566040 + (CA)n Simple_repeat Simple_repeat 2 54 0 326 251 147 80 chr17 35873427 35873590 -49564890 - MIR3 SINE MIR -2 206 33 254 262 83 41 chr17 35876335 35876480 -49562000 + MIR3 SINE MIR 36 186 -22 2165 121 0 0 chr17 35876503 35876793 -49561687 + AluSx SINE Alu 1 290 -22 398 258 20 24 chr17 35877396 35877521 -49560959 - MIR SINE MIR -63 145 42 1843 137 0 11 chr17 35878144 35878414 -49560066 + AluSx SINE Alu 43 309 -3 361 315 48 13 chr17 35878457 35878771 -49559709 + L1M4 LINE L1 3342 3666 -2480 1119 121 50 11 chr17 35879147 35879329 -49559151 - L1PA10 LINE L1 -3 6165 5977 3490 130 0 0 chr17 35879331 35879899 -49558581 + L1P LINE L1 4675 5242 -904 358 257 26 9 chr17 35879927 35880040 -49558440 + LTR33 LTR ERVL 403 517 -4 287 226 0 0 chr17 35880193 35880246 -49558234 + MER5A DNA MER1_type 134 186 -3 253 274 53 11 chr17 35880439 35880534 -49557946 - HERV16 LTR ERVL -3810 1186 1088 764 148 0 0 chr17 35880548 35880676 -49557804 - L1MA3 LINE L1 0 6305 6178 3846 171 15 13 chr17 35880680 35882082 -49556398 - L1 LINE L1 -3087 4478 3073 * 10022 166 41 13 chr17 35882078 35883882 -49554598 - L1 LINE L1 -5699 1866 12 449 305 90 11 chr17 35884173 35884350 -49554130 + MIR SINE MIR 33 223 -39 429 218 0 0 chr17 35884348 35884426 -49554054 - MER5A DNA MER1_type -111 78 1 * 392 273 10 0 chr17 35884697 35884796 -49553684 + HERV16 LTR ERVL 1720 1819 -3177 307 248 0 59 chr17 35884800 35884901 -49553579 - MER53 DNA DNA 0 189 95 487 257 53 39 chr17 35884929 35885135 -49553345 + HERV16 LTR ERVL 1882 2090 -3674 511 195 81 16 chr17 35886785 35886908 -49551572 - L1ME3 LINE L1 -159 6003 5873 773 10 42 0 chr17 35886914 35887010 -49551470 - L1PA4 LINE L1 -3 6152 6053 1928 91 12 0 chr17 35887387 35887639 -49550841 + AluSx SINE Alu 1 255 -57 1265 273 75 0 chr17 35887680 35888135 -49550345 - L1ME3 LINE L1 -348 5816 5328 5320 168 27 8 chr17 35888146 35890128 -49548352 - L1PB3 LINE L1 -10 6144 4122 897 267 50 28 chr17 35890124 35890626 -49547854 - L1ME3 LINE L1 -804 5342 4830 * 1357 231 12 80 chr17 35890641 35891130 -49547350 + MLT2B1 LTR ERVL 2 457 -63 198 0 0 0 chr17 35891137 35891159 -49547321 + (TC)n Simple_repeat Simple_repeat 2 23 0 195 114 0 0 chr17 35891159 35891194 -49547286 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 649 268 20 0 chr17 35891303 35891501 -49546979 - L1ME3 LINE L1 -1300 4846 4645 12057 211 25 15 chr17 35891523 35894170 -49544310 + L1PA15 LINE L1 2027 4709 -1456 232 27 54 0 chr17 35894170 35894207 -49544273 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 12057 211 25 15 chr17 35894207 35895292 -49543188 + L1PA15 LINE L1 4709 5783 -382 420 111 0 0 chr17 35895295 35895367 -49543113 + L1PA8 LINE L1 3288 3359 -2787 13228 110 11 7 chr17 35895468 35895525 -49542955 + L1PA8 LINE L1 3341 3396 -2776 2084 129 3 10 chr17 35895525 35895827 -49542653 + AluSq SINE Alu 6 305 -8 13228 110 11 7 chr17 35895827 35898629 -49539851 + L1PA8 LINE L1 3396 6163 -9 2142 193 0 2 chr17 35898638 35899031 -49539449 + L1PA15 LINE L1 5769 6160 -5 1387 210 93 21 chr17 35899038 35899076 -49539404 - L1ME3 LINE L1 -1526 4620 4586 2051 86 15 55 chr17 35899076 35899401 -49539079 - L1PA13 LINE L1 -3 6160 5849 1387 210 93 21 chr17 35899401 35899876 -49538604 - L1ME3 LINE L1 -1560 4586 4070 810 273 54 13 chr17 35900015 35900403 -49538077 + L1ME LINE L1 2607 3010 -3136 2319 82 7 0 chr17 35900407 35900700 -49537780 + AluSq SINE Alu 1 295 -18 819 40 0 0 chr17 35901468 35901567 -49536913 + SVA Other Other 1286 1384 -2 222 62 0 0 chr17 35901806 35901838 -49536642 + (CA)n Simple_repeat Simple_repeat 2 33 0 3083 277 70 43 chr17 35902464 35904866 -49533614 + L1ME LINE L1 2995 5462 -700 2827 52 0 0 chr17 35904866 35905212 -49533268 - L1PA7 LINE L1 -4 6150 5805 3083 277 70 43 chr17 35905212 35905275 -49533205 + L1ME LINE L1 5462 5522 -640 213 132 0 0 chr17 35905292 35905330 -49533150 + (CA)n Simple_repeat Simple_repeat 1 38 0 3105 211 94 90 chr17 35905378 35906275 -49532205 - L1MC4 LINE L1 -140 7902 6995 2049 139 0 7 chr17 35906275 35906577 -49531903 - AluSx SINE Alu -12 300 1 3105 211 94 90 chr17 35906577 35907117 -49531363 - L1MC4 LINE L1 -1047 6995 6459 9970 121 41 19 chr17 35907433 35909924 -49528556 + L1PBa LINE L1 1321 3863 -2999 358 167 0 0 chr17 35911356 35911422 -49527058 - MLT1A1 LTR MaLR 0 365 300 27 49 0 0 chr17 35911644 35911685 -49526795 + AT_rich Low_complexity Low_complexity 1 41 0 30 69 0 0 chr17 35911970 35912028 -49526452 + AT_rich Low_complexity Low_complexity 1 58 0 1205 192 19 15 chr17 35914374 35914635 -49523845 - L1MC2 LINE L1 -266 6078 5817 1777 162 74 8 chr17 35914659 35915053 -49523427 - L1MB2 LINE L1 -3 6168 5749 * 4049 226 28 19 chr17 35915050 35916239 -49522241 - L1MB2 LINE L1 -1323 4823 3624 466 168 47 9 chr17 35916239 35916346 -49522134 - LTR56 LTR ERV1 -138 307 197 346 341 78 26 chr17 35916410 35916680 -49521800 - L1ME4a LINE L1 -266 5855 5572 400 222 104 52 chr17 35916766 35916978 -49521502 + L1ME3 LINE L1 5937 6159 -3 353 336 32 24 chr17 35917549 35917674 -49520806 + MIR3 SINE MIR 30 155 -53 361 298 54 12 chr17 35917681 35917849 -49520631 + MER117 DNA MER1_type 3 177 -20 258 360 93 7 chr17 35918969 35919108 -49519372 - MIR3 SINE MIR -2 206 56 208 283 40 105 chr17 35919256 35919408 -49519072 + MER5A DNA MER1_type 36 177 -1 407 279 18 9 chr17 35919409 35919520 -49518960 - MIR3 SINE MIR -48 160 49 728 277 45 4 chr17 35920504 35920746 -49517734 - MLT1I LTR MaLR -155 254 3 848 133 0 0 chr17 35921706 35921826 -49516654 - FLAM_C SINE Alu -12 121 2 584 225 27 0 chr17 35922217 35922328 -49516152 - MER81 DNA DNA 0 114 1 204 241 0 0 chr17 35922413 35922471 -49516009 + (TA)n Simple_repeat Simple_repeat 1 58 0 261 297 52 19 chr17 35922472 35922684 -49515796 - L1ME4a LINE L1 -158 5963 5745 34 42 0 0 chr17 35922684 35922732 -49515748 + AT_rich Low_complexity Low_complexity 1 48 0 2000 114 29 4 chr17 35922877 35923158 -49515322 + AluSx SINE Alu 1 288 -24 776 279 54 41 chr17 35923396 35923712 -49514768 + MLT1E2 LTR MaLR 81 400 -226 962 212 32 41 chr17 36124344 36124647 -49313833 - L1MA9 LINE L1 -4 6293 6011 402 271 66 42 chr17 36124712 36124878 -49313602 + L2 LINE L2 3103 3272 -41 297 225 0 0 chr17 36124902 36124991 -49313489 + GA-rich Low_complexity Low_complexity 4 92 0 712 176 0 17 chr17 36124996 36125115 -49313365 + FRAM SINE Alu 40 156 -20 197 322 17 0 chr17 36125143 36125202 -49313278 + L3 LINE CR1 1517 1576 -1 412 286 99 6 chr17 36125602 36125773 -49312707 + MER5A DNA MER1_type 1 187 -2 1843 116 55 41 chr17 36126248 36126540 -49311940 - AluSq SINE Alu -17 296 1 184 160 0 80 chr17 36126761 36126811 -49311669 + MIR SINE MIR 105 150 -58 1937 160 3 0 chr17 36126868 36127162 -49311318 - AluJb SINE Alu -15 297 3 2454 52 0 39 chr17 36127184 36127490 -49310990 - AluY SINE Alu -17 294 1 401 244 126 16 chr17 36127635 36127762 -49310718 + MER5A DNA MER1_type 46 186 -3 1144 144 0 0 chr17 36128533 36128693 -49309787 - FRAM SINE Alu -16 160 1 276 343 21 43 chr17 36130394 36130534 -49307946 - MIR SINE MIR -112 150 14 253 280 213 47 chr17 36130991 36131141 -49307339 - MIR SINE MIR -80 182 8 1059 118 0 0 chr17 36131656 36131791 -49306689 + AluSq/x SINE Alu 1 135 -177 2188 101 4 0 chr17 36131791 36132105 -49306375 + AluSg SINE Alu 1 315 0 2015 144 7 7 chr17 36132298 36132597 -49305883 - AluJo SINE Alu -13 299 1 316 194 0 14 chr17 36132726 36132798 -49305682 - AluS SINE Alu 0 300 230 432 311 59 70 chr17 36132955 36133704 -49304776 + L1MEc LINE L1 237 2410 -937 418 302 89 22 chr17 36133709 36133934 -49304546 + L1MEc LINE L1 2390 2629 -3517 2066 139 7 0 chr17 36134082 36134369 -49304111 + AluSx SINE Alu 7 295 -17 242 302 160 0 chr17 36134369 36134475 -49304005 + MER5A DNA MER1_type 66 188 -1 1715 193 13 0 chr17 36134784 36135084 -49303396 - AluJo SINE Alu -8 304 1 4070 93 22 5 chr17 36135679 36136328 -49302152 - L1PB1 LINE L1 -270 5881 5223 24 0 0 0 chr17 36137646 36137670 -49300810 + AT_rich Low_complexity Low_complexity 1 24 0 783 149 0 0 chr17 36137672 36137786 -49300694 - FRAM SINE Alu -62 114 1 580 225 8 0 chr17 36138780 36138909 -49299571 + Zaphod DNA AcHobo 3877 4006 -25 307 111 0 0 chr17 36139542 36139587 -49298893 - MLT1K LTR MaLR -6 582 538 1409 211 28 7 chr17 36140534 36140819 -49297661 - AluSq SINE Alu -22 291 1 1398 189 7 60 chr17 36140850 36141152 -49297328 - AluSg SINE Alu -24 286 1 216 0 0 0 chr17 36141161 36141185 -49297295 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 2753 181 61 93 chr17 36141194 36142028 -49296452 + SVA Other Other 62 868 -518 1010 266 12 4 chr17 36142885 36143129 -49295351 + MIR SINE MIR 16 261 -1 267 219 105 48 chr17 36143159 36143247 -49295233 + L2 LINE L2 3138 3234 -38 2404 92 0 0 chr17 36143247 36143550 -49294930 + AluSx SINE Alu 1 303 -9 267 219 105 48 chr17 36143550 36143566 -49294914 + L2 LINE L2 3234 3248 -24 239 266 80 35 chr17 36143696 36143809 -49294671 - MIR3 SINE MIR -52 156 39 1774 122 88 27 chr17 36144619 36144913 -49293567 - AluJb SINE Alu 0 312 1 265 57 0 0 chr17 36145194 36145229 -49293251 + Alu SINE Alu 255 289 -13 2239 104 10 3 chr17 36145824 36146121 -49292359 - AluSx SINE Alu -13 299 1 894 226 94 13 chr17 36146304 36146539 -49291941 - MER87 LTR ERV1 0 541 288 1451 176 44 44 chr17 36146640 36146779 -49291701 - AluJb SINE Alu -40 272 131 2132 126 13 10 chr17 36146779 36147081 -49291399 - AluSx SINE Alu -9 303 1 1451 176 44 44 chr17 36147081 36147213 -49291267 - AluJb SINE Alu -180 132 1 310 185 0 0 chr17 36147215 36147269 -49291211 + MER3 DNA MER1_type 155 208 -1 279 221 29 114 chr17 36147297 36147391 -49291089 - L1MC4a LINE L1 -1893 5915 5835 2361 105 0 0 chr17 36147391 36147687 -49290793 - AluSp SINE Alu -17 296 1 279 221 29 114 chr17 36147687 36147732 -49290748 - L1MC4a LINE L1 -1973 5835 5788 1700 170 14 24 chr17 36148197 36148491 -49289989 + AluJo SINE Alu 1 291 -21 446 0 19 0 chr17 36148625 36148679 -49289801 + (TAAAA)n Simple_repeat Simple_repeat 2 56 0 354 228 24 24 chr17 36148708 36148831 -49289649 - L1ME3A LINE L1 -208 5962 5840 446 146 109 0 chr17 36148857 36148967 -49289513 + Charlie5 DNA MER1_type 2 123 -2489 544 155 58 0 chr17 36148969 36149072 -49289408 + Charlie5 DNA MER1_type 2234 2342 -270 1863 164 3 3 chr17 36149075 36149368 -49289112 - AluJb SINE Alu -9 303 11 21 0 0 0 chr17 36149388 36149409 -49289071 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 36149446 36149468 -49289012 + AT_rich Low_complexity Low_complexity 1 22 0 719 132 110 45 chr17 36149481 36149761 -49288719 + Charlie5 DNA MER1_type 2365 2579 -33 447 268 23 42 chr17 36149848 36150045 -49288435 - L1ME3A LINE L1 -348 5836 5645 2191 105 10 7 chr17 36150715 36151020 -49287460 + AluSx SINE Alu 3 308 -4 381 324 118 49 chr17 36151077 36151281 -49287199 + L1MC/D LINE L1 5281 5498 -623 24 0 0 0 chr17 36152081 36152105 -49286375 + AT_rich Low_complexity Low_complexity 1 24 0 1690 185 99 143 chr17 36152417 36152732 -49285748 + LTR8 LTR ERV1 1 329 -362 1884 121 38 0 chr17 36152732 36152997 -49285483 + AluSx SINE Alu 1 275 -37 221 0 35 0 chr17 36153002 36153031 -49285449 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1690 185 99 143 chr17 36153031 36153058 -49285422 + LTR8 LTR ERV1 333 360 -331 4708 142 16 46 chr17 36153058 36153877 -49284603 - LTR25 LTR ERV1 0 794 1 1690 185 99 143 chr17 36153877 36153900 -49284580 + LTR8 LTR ERV1 360 382 -309 2515 53 7 0 chr17 36153900 36154199 -49284281 + AluY SINE Alu 1 301 -10 1690 185 99 143 chr17 36154199 36154586 -49283894 + LTR8 LTR ERV1 382 691 0 2306 72 10 3 chr17 36155465 36155770 -49282710 - AluSq SINE Alu -6 307 1 646 266 102 13 chr17 36156478 36156714 -49281766 - MIR SINE MIR -7 255 3 2124 151 3 0 chr17 36156906 36157217 -49281263 + AluJb SINE Alu 1 312 0 578 178 68 51 chr17 36157815 36157933 -49280547 - FLAM_A SINE Alu -12 121 2 1495 196 77 0 chr17 36158838 36159123 -49279357 + AluJo SINE Alu 1 307 -5 433 137 53 53 chr17 36159505 36159600 -49278880 + MIR3 SINE MIR 62 156 -52 2402 84 0 3 chr17 36159762 36160059 -49278421 - AluY SINE Alu -15 296 1 436 164 16 131 chr17 36160760 36160830 -49277650 - MIR SINE MIR -1 261 208 2268 93 0 17 chr17 36160830 36161153 -49277327 - AluSx SINE Alu 0 319 2 436 164 16 131 chr17 36161153 36161203 -49277277 - MIR SINE MIR -54 208 154 2299 112 0 0 chr17 36161527 36161822 -49276658 - AluSx SINE Alu -17 295 1 2196 120 3 7 chr17 36161829 36161997 -49276483 - AluSx SINE Alu -13 299 131 378 0 0 0 chr17 36161997 36162039 -49276441 + (TG)n Simple_repeat Simple_repeat 1 42 0 2196 120 3 7 chr17 36162039 36162170 -49276310 - AluSx SINE Alu -181 131 1 900 150 0 0 chr17 36162211 36162344 -49276136 + AluSq/x SINE Alu 1 133 -180 306 182 0 0 chr17 36162589 36162644 -49275836 + Alu SINE Alu 239 293 -7 1969 146 13 0 chr17 36162819 36163120 -49275360 - AluY SINE Alu -6 305 1 2264 95 14 0 chr17 36163122 36163416 -49275064 - AluSq SINE Alu -15 298 1 1577 179 19 4 chr17 36163463 36163725 -49274755 - AluJo SINE Alu -46 266 1 275 218 91 36 chr17 36163731 36163896 -49274584 - L1ME LINE L1 -731 5431 5258 1160 172 0 20 chr17 36163955 36164013 -49274467 - MER20 DNA MER1_type -1 218 160 336 94 0 0 chr17 36164013 36164066 -49274414 + (TG)n Simple_repeat Simple_repeat 2 54 0 1160 172 0 20 chr17 36164066 36164211 -49274269 - MER20 DNA MER1_type -59 160 19 2096 125 10 22 chr17 36164251 36164562 -49273918 + AluSx SINE Alu 5 311 -1 1242 283 75 11 chr17 36164566 36165233 -49273247 - L1ME LINE L1 -1053 5093 4384 2342 91 0 7 chr17 36165246 36165544 -49272936 - AluSx SINE Alu -16 296 1 803 168 0 0 chr17 36165560 36165685 -49272795 - FLAM_C SINE Alu -7 126 2 1626 209 7 13 chr17 36165809 36166116 -49272364 - AluJo SINE Alu -6 306 2 182 150 25 0 chr17 36166153 36166193 -49272287 + (TA)n Simple_repeat Simple_repeat 1 41 0 407 273 56 14 chr17 36166452 36166595 -49271885 + MIR3 SINE MIR 24 172 -36 403 271 52 0 chr17 36166681 36166775 -49271705 - MER81 DNA DNA 0 114 16 4377 136 18 24 chr17 36166775 36166943 -49271537 - LTR39 LTR ERV1 0 783 615 2302 110 7 13 chr17 36166943 36167252 -49271228 - AluSx SINE Alu -5 307 1 4377 136 18 24 chr17 36167252 36167824 -49270656 - LTR39 LTR ERV1 -168 615 48 1377 157 57 90 chr17 36167964 36168263 -49270217 + AluJo SINE Alu 1 289 -23 756 176 8 0 chr17 36168293 36168412 -49270068 + FLAM_C SINE Alu 2 121 -22 213 65 0 0 chr17 36168412 36168443 -49270037 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 395 213 187 65 chr17 36168443 36168598 -49269882 + MER5A DNA MER1_type 15 188 -1 250 170 31 0 chr17 36168628 36168688 -49269792 - MIR SINE MIR -64 144 107 221 260 60 0 chr17 36168696 36168746 -49269734 - L2 LINE L2 0 3272 3220 293 247 41 72 chr17 36168747 36168844 -49269636 - MIR3 SINE MIR -102 106 13 2102 130 0 19 chr17 36169497 36169667 -49268813 - AluSx SINE Alu -11 301 129 243 61 0 0 chr17 36169667 36169700 -49268780 + (TG)n Simple_repeat Simple_repeat 2 34 0 2251 95 3 0 chr17 36169700 36169984 -49268496 - AluSp SINE Alu -28 285 1 2102 130 0 19 chr17 36169984 36170119 -49268361 - AluSx SINE Alu -181 131 1 1989 167 0 0 chr17 36170290 36170595 -49267885 - AluJo SINE Alu -5 307 3 384 263 178 0 chr17 36170866 36170984 -49267496 - MIR SINE MIR -11 251 113 881 165 0 0 chr17 36171003 36171136 -49267344 - AluSq/x SINE Alu -179 133 1 296 132 0 38 chr17 36171136 36171189 -49267291 - AluJo SINE Alu -166 136 86 261 323 47 19 chr17 36171206 36171334 -49267146 + MIR SINE MIR 6 141 -67 1852 169 68 74 chr17 36171479 36171532 -49266948 - L1M3 LINE L1 -740 5440 5388 2025 110 43 3 chr17 36171532 36171814 -49266666 - AluSq SINE Alu -20 293 1 2489 47 0 13 chr17 36171821 36172119 -49266361 - AluY SINE Alu -17 294 1 1852 169 68 74 chr17 36172119 36172334 -49266146 - L1M3 LINE L1 -798 5382 5167 2021 152 0 3 chr17 36172334 36172630 -49265850 - AluJb SINE Alu -17 295 1 1852 169 68 74 chr17 36172630 36172814 -49265666 - L1M3 LINE L1 -1013 5167 4983 2489 84 0 0 chr17 36172814 36173123 -49265357 - AluSg SINE Alu -1 309 1 1852 169 68 74 chr17 36173123 36173355 -49265125 - L1M3 LINE L1 -1197 4983 4769 1420 133 155 47 chr17 36173559 36173851 -49264629 + MSTA LTR MaLR 60 392 -36 2440 97 3 0 chr17 36173851 36174161 -49264319 - AluSq SINE Alu -2 311 1 1420 133 155 47 chr17 36174161 36174190 -49264290 + MSTA LTR MaLR 392 416 -12 708 289 74 11 chr17 36174194 36174583 -49263897 - L1ME3A LINE L1 -311 5859 5449 2393 66 0 3 chr17 36174583 36174884 -49263596 - AluSg SINE Alu -10 300 1 25 31 0 0 chr17 36175054 36175086 -49263394 + AT_rich Low_complexity Low_complexity 1 32 0 863 66 0 0 chr17 36176325 36176431 -49262049 + FLAM_C SINE Alu 6 111 -32 180 77 0 0 chr17 36176584 36176610 -49261870 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 611 303 59 31 chr17 36176613 36176936 -49261544 - L2 LINE L2 -15 3298 2967 459 187 0 0 chr17 36177101 36177176 -49261304 - AluS SINE Alu -236 76 2 1765 147 74 0 chr17 36177177 36177462 -49261018 - AluSx SINE Alu -6 306 1 2294 107 0 10 chr17 36177488 36177798 -49260682 - AluSx SINE Alu -5 307 1 830 239 161 53 chr17 36177912 36178267 -49260213 - L2 LINE L2 -526 2788 2396 815 242 28 11 chr17 36178290 36178305 -49260175 - AluJo/FRAM SINE Alu 0 312 299 2453 87 10 0 chr17 36178305 36178615 -49259865 - AluSp SINE Alu 0 313 1 815 242 28 11 chr17 36178615 36178777 -49259703 - AluJo/FRAM SINE Alu -13 299 132 579 253 214 67 chr17 36178808 36179196 -49259284 - L2 LINE L2 -958 2356 1912 303 162 54 153 chr17 36179719 36179788 -49258692 + MER69A DNA AcHobo 1 57 -2469 2392 95 0 0 chr17 36179788 36180084 -49258396 - AluSx SINE Alu -16 296 1 303 162 54 153 chr17 36180084 36180125 -49258355 + MER69A DNA AcHobo 57 100 -77 1719 166 29 0 chr17 36180441 36180719 -49257761 - AluJo SINE Alu -18 294 9 386 253 74 0 chr17 36180770 36180865 -49257615 + MER5A DNA MER1_type 8 109 -80 951 233 43 0 chr17 36182767 36182977 -49255503 - MIR SINE MIR -31 231 13 2229 81 34 3 chr17 36187518 36187859 -49250621 - AluY SINE Alu 0 350 1 2438 75 0 3 chr17 36189150 36189445 -49249035 + AluSp SINE Alu 1 294 -19 1397 191 4 0 chr17 36189582 36189812 -49248668 - AluJo SINE Alu -81 231 1 2114 133 0 0 chr17 36189832 36190178 -49248302 - AluSq SINE Alu 0 346 1 305 197 138 110 chr17 36190188 36190358 -49248122 + L1ME3A LINE L1 5931 6110 -60 816 196 0 0 chr17 36190358 36190491 -49247989 + FLAM_C SINE Alu 1 133 0 305 197 138 110 chr17 36190491 36190538 -49247942 + L1ME3A LINE L1 6110 6154 -16 366 61 0 0 chr17 36190752 36190801 -49247679 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr17 36190801 36190823 -49247657 + (TGG)n Simple_repeat Simple_repeat 3 24 0 286 247 0 62 chr17 36191113 36191194 -49247286 + MIR3 SINE MIR 130 205 -3 754 254 16 5 chr17 36191379 36191568 -49246912 + MER58C DNA MER1_type 15 205 -10 2339 76 34 0 chr17 36191571 36191862 -49246618 + AluSx SINE Alu 3 303 -9 26 74 0 0 chr17 36191976 36192030 -49246450 + AT_rich Low_complexity Low_complexity 1 54 0 581 242 23 0 chr17 36193048 36193176 -49245304 - MER5A DNA MER1_type -22 167 37 1213 166 38 0 chr17 36194273 36194484 -49243996 + MER20 DNA MER1_type 1 219 0 213 282 17 17 chr17 36194901 36194978 -49243502 - MIR SINE MIR -34 174 97 298 226 151 34 chr17 36195342 36195488 -49242992 + MER69A DNA AcHobo 5 167 -10 616 194 24 8 chr17 36195625 36195749 -49242731 - LTR39 LTR ERV1 0 783 658 526 73 0 0 chr17 36196035 36196103 -49242377 + Alu SINE Alu 2 69 -242 336 208 39 13 chr17 36196297 36196374 -49242106 + MER91A DNA MER1_type 26 104 -92 375 299 24 8 chr17 36197723 36197850 -49240630 - MLT1H LTR MaLR -326 223 95 2049 182 35 68 chr17 36198278 36198789 -49239691 + LTR10E LTR ERV1 115 608 -25 2389 102 13 0 chr17 36198816 36199119 -49239361 + AluSx SINE Alu 1 307 -5 2166 128 0 0 chr17 36199529 36199825 -49238655 + AluSx SINE Alu 1 296 -16 2295 104 0 3 chr17 36200523 36200830 -49237650 + AluSq SINE Alu 7 312 -1 932 110 110 0 chr17 36200863 36200999 -49237481 + AluSg SINE Alu 1 151 -159 1130 116 0 0 chr17 36201699 36201854 -49236626 - AluSc SINE Alu -5 304 150 2414 57 10 24 chr17 36202001 36202297 -49236183 + AluY SINE Alu 1 292 -19 219 36 0 0 chr17 36202541 36202569 -49235911 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2373 101 3 0 chr17 36202933 36203230 -49235250 - AluSg SINE Alu -12 298 1 1795 161 40 6 chr17 36203370 36203692 -49234788 - LTR28 LTR ERV1 -687 333 1 3919 108 16 23 chr17 36203692 36204133 -49234347 - Tigger1 DNA MER2_type -175 2243 1806 2465 86 0 0 chr17 36204133 36204436 -49234044 + AluSq SINE Alu 1 303 -10 3919 108 16 23 chr17 36204436 36204613 -49233867 - Tigger1 DNA MER2_type -612 1806 1629 2308 96 0 3 chr17 36204613 36204906 -49233574 - AluSc SINE Alu -13 296 5 4894 106 47 0 chr17 36204911 36205655 -49232825 - Tigger1 DNA MER2_type -905 1513 735 2320 101 0 9 chr17 36206558 36206874 -49231606 + AluSq SINE Alu 1 313 0 457 84 28 0 chr17 36206890 36206961 -49231519 + MADE1 DNA Mariner 7 79 -1 209 228 35 18 chr17 36206997 36207054 -49231426 - MIR SINE MIR -63 145 88 198 270 48 16 chr17 36207124 36207187 -49231293 - MIR SINE MIR 0 262 198 2322 108 3 0 chr17 36207384 36207691 -49230789 + AluSq SINE Alu 6 313 0 2578 114 28 2 chr17 36207793 36208188 -49230292 - MER21A LTR ERV1 -10 921 517 893 251 124 60 chr17 36208182 36208565 -49229915 + LTR1B LTR ERV1 33 463 -363 * 2349 99 0 0 chr17 36208565 36208859 -49229621 - AluSx SINE Alu -18 294 1 893 251 124 60 chr17 36208859 36209021 -49229459 + LTR1B LTR ERV1 463 613 -213 798 163 103 36 chr17 36209223 36209352 -49229128 - MER21A LTR ERV1 -428 435 316 1899 169 0 3 chr17 36209352 36209653 -49228827 - AluJb SINE Alu -12 300 1 798 163 103 36 chr17 36209653 36209849 -49228631 - MER21A LTR ERV1 -547 316 36 4399 116 14 41 chr17 36209849 36210556 -49227924 - LTR8 LTR ERV1 -3 688 1 798 163 103 36 chr17 36210556 36210595 -49227885 - MER21A LTR ERV1 -827 36 1 1252 199 60 38 chr17 36210654 36210873 -49227607 + MER33 DNA MER1_type 1 231 -2354 2225 114 0 3 chr17 36210873 36211170 -49227310 + AluSx SINE Alu 5 300 -12 1252 199 60 38 chr17 36211170 36211267 -49227213 + MER33 DNA MER1_type 231 324 0 2308 116 0 3 chr17 36211290 36211593 -49226887 - AluSx SINE Alu -10 302 1 258 298 165 13 chr17 36211594 36211721 -49226759 - MIR SINE MIR -7 255 98 2281 157 0 3 chr17 36211721 36212059 -49226421 + MER1B DNA MER1_type 1 337 0 258 298 165 13 chr17 36212059 36212089 -49226391 - MIR SINE MIR -164 98 74 956 77 32 26 chr17 36212095 36212251 -49226229 + L1MA3 LINE L1 5873 6029 -276 1827 207 110 78 chr17 36212380 36213099 -49225381 - LTR1B LTR ERV1 -84 742 1 1596 98 29 36 chr17 36213099 36213219 -49225261 + L1MA2 LINE L1 6027 6146 -158 1952 164 13 0 chr17 36213219 36213524 -49224956 + AluJb SINE Alu 1 309 -3 1596 98 29 36 chr17 36213524 36213680 -49224800 + L1MA2 LINE L1 6146 6301 -3 2408 81 0 3 chr17 36213772 36214067 -49224413 - AluY SINE Alu -17 294 1 24 0 0 0 chr17 36214067 36214091 -49224389 + AT_rich Low_complexity Low_complexity 1 24 0 327 292 0 31 chr17 36214133 36214229 -49224251 - MIR SINE MIR -93 115 23 783 246 99 16 chr17 36214253 36214505 -49223975 - L3 LINE CR1 -27 1550 1278 1559 189 16 31 chr17 36215344 36215661 -49222819 + AluJo SINE Alu 1 312 0 2051 219 13 5 chr17 36215772 36216164 -49222316 - MSTD LTR MaLR 0 396 2 442 304 101 42 chr17 36216216 36216433 -49222047 - MIR SINE MIR -15 247 18 284 255 0 28 chr17 36216459 36216565 -49221915 - L1MC5 LINE L1 -51 7910 7808 2245 87 45 0 chr17 36216580 36216868 -49221612 - AluSq SINE Alu -12 301 1 1086 78 0 42 chr17 36216868 36217010 -49221470 - AluSq/x SINE Alu -177 136 1 305 222 28 0 chr17 36217021 36217093 -49221387 - L1MC5 LINE L1 -186 7775 7702 2098 79 45 0 chr17 36217393 36217658 -49220822 + AluSp SINE Alu 15 291 -22 429 141 0 0 chr17 36217658 36217729 -49220751 + (GGGAA)n Simple_repeat Simple_repeat 1 71 0 423 0 0 0 chr17 36217798 36217845 -49220635 + (TG)n Simple_repeat Simple_repeat 1 47 0 243 79 0 0 chr17 36218078 36218116 -49220364 + (TG)n Simple_repeat Simple_repeat 2 39 0 1824 152 20 26 chr17 36218317 36218619 -49219861 + AluJb SINE Alu 1 300 -12 2183 99 0 23 chr17 36218641 36218943 -49219537 + AluSx SINE Alu 1 295 -17 2273 99 10 0 chr17 36219502 36219796 -49218684 - AluSx SINE Alu -14 298 2 357 47 0 0 chr17 36220274 36220317 -49218163 + L2 LINE L2 3262 3304 -9 271 253 40 0 chr17 36220317 36220392 -49218088 + GA-rich Low_complexity Low_complexity 4 81 0 619 300 162 48 chr17 36220499 36220662 -49217818 - L2 LINE L2 -775 2539 2396 2325 116 0 6 chr17 36220662 36220973 -49217507 - AluSx SINE Alu -3 309 1 619 300 162 48 chr17 36220973 36221745 -49216735 - L2 LINE L2 -918 2396 1497 215 411 0 0 chr17 36221841 36221914 -49216566 - MIR SINE MIR -138 124 52 * 380 274 90 112 chr17 36221911 36222323 -49216157 - L2 LINE L2 -27 3245 2843 829 280 143 42 chr17 36222363 36222916 -49215564 - L2 LINE L2 -561 2753 2145 2099 144 13 0 chr17 36222964 36223269 -49215211 + AluJb SINE Alu 1 309 -3 2269 107 13 7 chr17 36223375 36223684 -49214796 + AluSx SINE Alu 1 311 -1 1146 122 10 51 chr17 36223686 36223883 -49214597 + AluSg/x SINE Alu 120 308 -2 1130 265 103 72 chr17 36224757 36225103 -49213377 + L1ME LINE L1 58 392 -5727 2535 81 0 0 chr17 36225103 36225411 -49213069 + AluY SINE Alu 1 308 -3 1130 265 103 72 chr17 36225411 36225520 -49212960 + L1ME LINE L1 392 496 -5623 2042 119 0 51 chr17 36225520 36225854 -49212626 + AluSq SINE Alu 1 313 0 1130 265 103 72 chr17 36225854 36226127 -49212353 + L1ME LINE L1 496 759 -5360 2332 103 0 7 chr17 36226127 36226437 -49212043 + AluSc SINE Alu 1 308 -1 1130 265 103 72 chr17 36226437 36226687 -49211793 + L1ME LINE L1 759 1068 -5051 1936 137 11 0 chr17 36226728 36227013 -49211467 + AluJo SINE Alu 14 301 -11 180 77 0 0 chr17 36227013 36227039 -49211441 + (GGGGA)n Simple_repeat Simple_repeat 1 26 0 491 261 86 60 chr17 36227048 36227242 -49211238 + L1ME LINE L1 1214 1402 -1088 2305 109 10 6 chr17 36227242 36227554 -49210926 + AluSq SINE Alu 1 313 0 491 261 86 60 chr17 36227554 36227735 -49210745 + L1ME LINE L1 1402 1617 -873 350 327 43 63 chr17 36228458 36228761 -49209719 + L1ME LINE L1 1829 2125 -4185 360 0 0 0 chr17 36228818 36228858 -49209622 + (CA)n Simple_repeat Simple_repeat 2 41 0 2196 96 0 0 chr17 36228893 36229164 -49209316 + AluSx SINE Alu 12 282 -30 182 150 25 0 chr17 36229165 36229205 -49209275 + (TA)n Simple_repeat Simple_repeat 1 41 0 1578 199 7 20 chr17 36229242 36229544 -49208936 + AluJo SINE Alu 2 299 -13 784 168 0 0 chr17 36229673 36229798 -49208682 + FLAM_C SINE Alu 2 126 -7 2340 87 0 7 chr17 36229814 36230112 -49208368 + AluSx SINE Alu 1 296 -16 1342 274 78 14 chr17 36230125 36230792 -49207688 + L1ME LINE L1 4367 5076 -1053 2063 125 10 22 chr17 36230796 36231107 -49207373 - AluSx SINE Alu -1 311 5 1231 172 0 20 chr17 36231147 36231292 -49207188 + MER20 DNA MER1_type 19 160 -59 336 94 0 0 chr17 36231292 36231345 -49207135 + (CA)n Simple_repeat Simple_repeat 2 54 0 1231 172 0 20 chr17 36231345 36231403 -49207077 + MER20 DNA MER1_type 160 218 -1 940 239 73 90 chr17 36231462 36231633 -49206847 + L1ME LINE L1 5241 5414 -731 1553 179 19 4 chr17 36231633 36231895 -49206585 + AluJo SINE Alu 1 266 -46 940 239 73 90 chr17 36231895 36231942 -49206538 + L1ME LINE L1 5414 5460 -685 2462 67 3 0 chr17 36231942 36232240 -49206240 + AluSx SINE Alu 1 299 -13 940 239 73 90 chr17 36232240 36232584 -49205896 + L1ME LINE L1 5460 5794 -351 1522 130 155 47 chr17 36232636 36232665 -49205815 - MSTA LTR MaLR -12 416 392 2429 93 3 0 chr17 36232665 36232975 -49205505 + AluSq SINE Alu 1 311 -2 1522 130 155 47 chr17 36232975 36233267 -49205213 - MSTA LTR MaLR -36 392 60 3671 156 55 93 chr17 36233471 36233703 -49204777 + L1MB3 LINE L1 4769 5008 -1175 2469 84 0 0 chr17 36233703 36234012 -49204468 + AluSg SINE Alu 1 309 -1 3671 156 55 93 chr17 36234012 36234196 -49204284 + L1MB3 LINE L1 5008 5198 -985 1991 152 0 3 chr17 36234196 36234492 -49203988 + AluJb SINE Alu 1 295 -17 3671 156 55 93 chr17 36234492 36234707 -49203773 + L1MB3 LINE L1 5198 5420 -763 2485 47 0 13 chr17 36234707 36235005 -49203475 + AluY SINE Alu 1 294 -17 2008 110 43 3 chr17 36235012 36235294 -49203186 + AluSq SINE Alu 1 293 -20 3671 156 55 93 chr17 36235294 36235553 -49202927 + L1MB3 LINE L1 5426 5693 -490 2373 93 7 7 chr17 36235553 36235863 -49202617 + AluSq SINE Alu 1 310 -3 3671 156 55 93 chr17 36235863 36235910 -49202570 + L1MB3 LINE L1 5693 5740 -443 2313 67 0 54 chr17 36235910 36236225 -49202255 + AluSq SINE Alu 1 298 -15 3671 156 55 93 chr17 36236225 36236759 -49201721 + L1MB3 LINE L1 5740 6131 -52 2533 69 0 0 chr17 36236759 36237062 -49201418 + AluSg SINE Alu 1 303 -7 3671 156 55 93 chr17 36237062 36237111 -49201369 + L1MB3 LINE L1 6131 6180 -3 2171 107 0 46 chr17 36237252 36237578 -49200902 - AluSx SINE Alu -1 311 1 1670 187 7 17 chr17 36237579 36237878 -49200602 - AluJo SINE Alu -16 296 1 2214 113 10 0 chr17 36237902 36238195 -49200285 - AluSx SINE Alu -16 296 1 1830 157 7 17 chr17 36238529 36238822 -49199658 - AluJb SINE Alu -22 290 1 2017 161 0 0 chr17 36239233 36239543 -49198937 + AluSx SINE Alu 1 310 -2 2160 123 0 7 chr17 36240113 36240414 -49198066 + AluSx SINE Alu 5 303 -9 943 194 0 6 chr17 36240500 36240660 -49197820 + AluJb SINE Alu 136 294 -18 750 189 18 53 chr17 36240716 36240906 -49197574 - FAM SINE Alu 0 175 1 2218 122 3 0 chr17 36240916 36241220 -49197260 - AluSx SINE Alu -7 305 1 263 247 68 0 chr17 36241267 36241340 -49197140 + MIR3 SINE MIR 108 185 -23 23 0 0 0 chr17 36241792 36241815 -49196665 + AT_rich Low_complexity Low_complexity 1 23 0 1342 79 6 6 chr17 36241817 36241994 -49196486 - AluSq SINE Alu -4 309 133 200 33 0 33 chr17 36241994 36242024 -49196456 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2208 102 0 3 chr17 36242024 36242309 -49196171 - AluSx SINE Alu -28 284 1 3576 88 45 18 chr17 36242310 36242824 -49195656 - L1MC1 LINE L1 -229 6104 5577 1074 146 6 0 chr17 36242825 36242983 -49195497 + FRAM SINE Alu 1 158 -18 384 168 0 15 chr17 36242992 36243066 -49195414 + AluJb SINE Alu 67 126 -176 850 86 18 0 chr17 36243077 36243200 -49195280 - L1MC/D LINE L1 -586 5588 5468 2265 108 0 10 chr17 36243214 36243521 -49194959 + AluSx SINE Alu 4 307 -5 302 274 45 62 chr17 36243794 36243973 -49194507 - L1ME4a LINE L1 -2 6119 5944 249 228 18 0 chr17 36244109 36244166 -49194314 + MIR SINE MIR 89 146 -62 1480 126 105 4 chr17 36244325 36244564 -49193916 - AluJb SINE Alu -1 311 49 256 114 0 0 chr17 36244575 36244610 -49193870 + Alu SINE Alu 2 36 -266 2382 101 3 0 chr17 36244729 36245036 -49193444 + AluSx SINE Alu 2 309 -3 2495 64 0 22 chr17 36245066 36245377 -49193103 + AluY SINE Alu 1 304 -7 1372 153 77 35 chr17 36245845 36245882 -49192598 + MLT1J LTR MaLR 6 40 -471 1995 141 13 0 chr17 36245882 36246181 -49192299 - AluSx SINE Alu -9 303 1 1372 153 77 35 chr17 36246181 36246554 -49191926 + MLT1J LTR MaLR 40 485 -26 1212 173 0 5 chr17 36246787 36246978 -49191502 - AluJ SINE Alu -12 300 111 213 213 0 0 chr17 36246992 36247039 -49191441 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr17 36247039 36247060 -49191420 + (CA)n Simple_repeat Simple_repeat 2 22 0 323 303 0 0 chr17 36247061 36247150 -49191330 - L1MC4 LINE L1 -1339 6703 6615 310 287 23 0 chr17 36247075 36247162 -49191318 + L1MC4 LINE L1 6614 6702 -1340 * 237 250 23 0 chr17 36247163 36247251 -49191229 - L1MC4 LINE L1 -1339 6703 6614 285 98 0 0 chr17 36247257 36247298 -49191182 + (TA)n Simple_repeat Simple_repeat 1 41 0 811 111 0 26 chr17 36247298 36247415 -49191065 - AluJ SINE Alu -186 126 13 950 144 0 13 chr17 36247427 36247580 -49190900 - FRAM SINE Alu -11 165 15 1927 138 0 10 chr17 36247584 36247875 -49190605 - AluSq SINE Alu -20 293 6 207 173 0 39 chr17 36247887 36247939 -49190541 + T-rich Low_complexity Low_complexity 6 55 0 1980 90 83 42 chr17 36247974 36248263 -49190217 - AluSx SINE Alu -11 301 1 1303 125 90 39 chr17 36248272 36248426 -49190054 - L1MB3 LINE L1 -2 6181 6007 2215 117 3 3 chr17 36248426 36248725 -49189755 + AluSx SINE Alu 1 299 -13 1303 125 90 39 chr17 36248725 36248826 -49189654 - L1MB3 LINE L1 -176 6007 5913 2472 52 0 0 chr17 36248829 36249119 -49189361 + AluY SINE Alu 1 290 -21 1470 126 61 82 chr17 36249128 36249422 -49189058 + AluSx SINE Alu 1 288 -24 207 100 0 0 chr17 36249463 36249493 -49188987 + (ATG)n Simple_repeat Simple_repeat 2 31 0 23 0 0 0 chr17 36249614 36249637 -49188843 + AT_rich Low_complexity Low_complexity 1 23 0 298 248 51 74 chr17 36249662 36249710 -49188770 + L1ME4a LINE L1 5684 5732 -389 2225 112 0 0 chr17 36249710 36250006 -49188474 + AluSx SINE Alu 11 306 -6 298 248 51 74 chr17 36250006 36250117 -49188363 + L1ME4a LINE L1 5732 5822 -299 239 200 50 33 chr17 36250145 36250205 -49188275 + L1ME4a LINE L1 5976 6036 -85 1806 154 33 26 chr17 36250292 36250475 -49188005 - AluJo SINE Alu -5 307 120 234 0 0 0 chr17 36250475 36250501 -49187979 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1806 154 33 26 chr17 36250501 36250622 -49187858 - AluJo SINE Alu -192 120 1 1918 147 0 11 chr17 36250650 36250935 -49187545 + AluSx SINE Alu 1 282 -30 2223 121 0 16 chr17 36250995 36251308 -49187172 - AluSx SINE Alu -4 308 1 2163 103 3 0 chr17 36251448 36251758 -49186722 + AluSp SINE Alu 1 311 0 347 253 74 0 chr17 36252247 36252342 -49186138 - MER5A DNA MER1_type -80 109 8 1690 166 29 0 chr17 36252393 36252671 -49185809 + AluJo SINE Alu 9 294 -18 328 162 54 153 chr17 36252987 36253028 -49185452 - MER69A DNA AcHobo -2426 100 57 2373 95 0 0 chr17 36253028 36253324 -49185156 + AluSx SINE Alu 1 296 -16 328 162 54 153 chr17 36253324 36253393 -49185087 - MER69A DNA AcHobo -2469 57 1 433 256 242 49 chr17 36253957 36254304 -49184176 + L2 LINE L2 1943 2356 -958 786 236 28 11 chr17 36254335 36254497 -49183983 + FRAM SINE Alu 1 163 -149 2428 87 10 0 chr17 36254497 36254807 -49183673 + AluSp SINE Alu 1 313 0 786 236 28 11 chr17 36254807 36254822 -49183658 + FRAM SINE Alu 163 176 0 711 239 161 53 chr17 36254845 36255200 -49183280 + L2 LINE L2 2396 2788 -526 2271 107 0 10 chr17 36255314 36255624 -49182856 + AluSx SINE Alu 1 307 -5 1759 133 74 0 chr17 36255650 36255935 -49182545 + AluJb SINE Alu 1 306 -6 438 187 0 0 chr17 36255936 36256011 -49182469 + AluS SINE Alu 2 76 -237 474 316 56 28 chr17 36256176 36256499 -49181981 + L2 LINE L2 2967 3298 -15 180 77 0 0 chr17 36256502 36256528 -49181952 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 864 66 0 0 chr17 36256681 36256787 -49181693 - FLAM_C SINE Alu -32 111 6 25 31 0 0 chr17 36258026 36258058 -49180422 + AT_rich Low_complexity Low_complexity 1 32 0 2204 88 0 3 chr17 36258228 36258525 -49179955 + AluSg SINE Alu 1 296 -14 2223 79 3 33 chr17 36258831 36259136 -49179344 - AluY SINE Alu -15 296 1 1875 92 0 113 chr17 36259579 36259907 -49178573 + AluSx SINE Alu 1 291 -11 1470 122 126 16 chr17 36260041 36260181 -49178299 - AluSg1 SINE Alu 0 305 182 1741 120 0 0 chr17 36260181 36260415 -49178065 - AluSx SINE Alu -78 234 1 1470 122 126 16 chr17 36260415 36260551 -49177929 - AluSg1 SINE Alu -123 182 1 1772 145 16 45 chr17 36260628 36260975 -49177505 + AluJo SINE Alu 8 312 0 274 135 0 0 chr17 36261046 36261083 -49177397 - Alu SINE Alu -263 37 1 2258 111 3 0 chr17 36261252 36261549 -49176931 + AluSx SINE Alu 1 298 -14 2048 109 36 0 chr17 36262075 36262395 -49176085 - AluSp SINE Alu 0 330 1 180 111 0 0 chr17 36262563 36262590 -49175890 + (ATG)n Simple_repeat Simple_repeat 2 28 0 2369 119 0 0 chr17 36263797 36264107 -49174373 + AluSx SINE Alu 1 310 -2 695 192 8 0 chr17 36264451 36264576 -49173904 - FLAM_A SINE Alu -7 126 1 1094 118 0 7 chr17 36264622 36264774 -49173706 + AluJ SINE Alu 1 151 -161 673 192 16 0 chr17 36264939 36265064 -49173416 + AluJ SINE Alu 157 283 -29 303 28 0 0 chr17 36265068 36265104 -49173376 + (CA)n Simple_repeat Simple_repeat 1 36 0 2263 123 10 0 chr17 36265120 36265428 -49173052 - AluSx SINE Alu -1 311 1 484 189 0 11 chr17 36265649 36265739 -49172741 + AluJo SINE Alu 125 213 -99 1368 142 75 37 chr17 36266475 36266600 -49171880 + AluJo SINE Alu 29 148 -164 2293 95 10 0 chr17 36266600 36266894 -49171586 + AluSc SINE Alu 1 297 -12 1368 142 75 37 chr17 36266894 36267036 -49171444 + AluJo SINE Alu 148 306 -6 2277 123 0 0 chr17 36268115 36268423 -49170057 - AluSq SINE Alu -5 308 1 1301 92 0 0 chr17 36268579 36268742 -49169738 - AluY SINE Alu -16 295 133 2434 87 0 0 chr17 36268742 36269042 -49169438 - AluSg SINE Alu -1 309 10 1388 130 20 0 chr17 36269084 36269284 -49169196 + AluSg/x SINE Alu 94 297 -13 2387 84 0 3 chr17 36269326 36269623 -49168857 - AluY SINE Alu -15 296 1 394 164 16 131 chr17 36270324 36270394 -49168086 - MIR SINE MIR -1 261 208 2256 93 0 17 chr17 36270394 36270717 -49167763 - AluSx SINE Alu 0 319 2 394 164 16 131 chr17 36270717 36270767 -49167713 - MIR SINE MIR -54 208 154 2281 112 0 0 chr17 36271091 36271386 -49167094 - AluSx SINE Alu -17 295 1 2173 120 3 7 chr17 36271393 36271561 -49166919 - AluSx SINE Alu -13 299 131 378 0 0 0 chr17 36271561 36271603 -49166877 + (TG)n Simple_repeat Simple_repeat 1 42 0 2173 120 3 7 chr17 36271603 36271734 -49166746 - AluSx SINE Alu -181 131 1 890 150 0 0 chr17 36271775 36271908 -49166572 + AluSq/x SINE Alu 1 133 -180 328 182 0 0 chr17 36272153 36272208 -49166272 + Alu SINE Alu 241 295 -7 1943 144 13 0 chr17 36272386 36272684 -49165796 - AluY SINE Alu -9 302 1 2111 123 14 0 chr17 36272686 36272978 -49165502 - AluSq SINE Alu -15 298 3 1888 168 7 0 chr17 36273235 36273533 -49164947 + AluJb SINE Alu 1 300 -12 1500 192 49 0 chr17 36273538 36273829 -49164651 + AluJo SINE Alu 1 300 -12 904 134 0 8 chr17 36274129 36274263 -49164217 + FLAM_C SINE Alu 1 133 0 383 129 14 29 chr17 36274278 36274348 -49164132 + Alu SINE Alu 233 301 0 2088 148 14 0 chr17 36274375 36274727 -49163753 + L1MB4 LINE L1 5824 6180 0 520 102 0 23 chr17 36274735 36274823 -49163657 + L1MB8 LINE L1 6093 6178 0 811 210 25 6 chr17 36274834 36274991 -49163489 + AluJ SINE Alu 138 297 -15 2029 152 25 52 chr17 36274998 36275251 -49163229 + L1MB8 LINE L1 5442 5681 -503 1849 154 0 13 chr17 36275251 36275594 -49162886 - AluJb SINE Alu 0 312 1 2029 152 25 52 chr17 36275594 36275742 -49162738 + L1MB8 LINE L1 5681 5832 -352 1094 53 29 100 chr17 36275741 36275810 -49162670 + L1PA11 LINE L1 5996 6068 -106 * 1181 92 0 6 chr17 36275810 36275974 -49162506 + L1PA7 LINE L1 5992 6154 0 1094 53 29 100 chr17 36275974 36276074 -49162406 + L1PA11 LINE L1 6068 6153 -21 1831 148 5 56 chr17 36276079 36276214 -49162266 + L1MB8 LINE L1 5808 5948 -230 2149 104 3 7 chr17 36276214 36276521 -49161959 + AluSx SINE Alu 1 306 -6 1831 148 5 56 chr17 36276521 36276776 -49161704 + L1MB8 LINE L1 5948 6178 0 2236 95 0 7 chr17 36276796 36277101 -49161379 - AluY SINE Alu -8 303 1 1430 143 83 30 chr17 36277122 36277387 -49161093 + AluJo SINE Alu 3 281 -31 943 162 0 23 chr17 36277408 36277581 -49160899 - AluSg/x SINE Alu -9 301 133 355 298 35 0 chr17 36277582 36277698 -49160782 - L1MC4 LINE L1 -1339 6703 6613 386 120 27 93 chr17 36277591 36277666 -49160814 + L1MCa LINE L1 1995 2064 -4362 314 284 23 23 chr17 36277669 36277757 -49160723 - L1MC4 LINE L1 -1339 6703 6616 * 363 190 0 66 chr17 36277728 36277825 -49160655 + L1MC4 LINE L1 1996 6985 -1337 346 284 43 23 chr17 36277817 36277958 -49160522 - L1MC4 LINE L1 -1339 6703 6613 * 329 215 46 0 chr17 36277948 36278013 -49160467 + L1MCa LINE L1 1996 2063 -4363 * 359 274 71 0 chr17 36277968 36278052 -49160428 - L1MC4 LINE L1 -1340 6702 6613 * 385 274 85 0 chr17 36278043 36278160 -49160320 - L1MC4 LINE L1 -1139 6701 6550 334 258 0 43 chr17 36278179 36278272 -49160208 - L1MC4 LINE L1 -1341 6701 6613 314 278 22 33 chr17 36278263 36278280 -49160200 - L1MC4 LINE L1 -1341 6701 6685 * 917 110 0 11 chr17 36278280 36278462 -49160018 + (TA)n Simple_repeat Simple_repeat 1 180 0 314 278 22 33 chr17 36278462 36278534 -49159946 - L1MC4 LINE L1 -1357 6685 6613 * 318 243 0 14 chr17 36278492 36278562 -49159918 + L1MCa LINE L1 1996 2064 -4362 * 351 318 0 14 chr17 36278517 36278664 -49159816 - L1MC4 LINE L1 -1339 6703 6613 311 252 53 46 chr17 36278568 36278699 -49159781 + L1MCa LINE L1 1933 2064 -4362 * 378 132 0 0 chr17 36278703 36278779 -49159701 + (TA)n Simple_repeat Simple_repeat 1 76 0 2311 71 0 0 chr17 36278779 36279074 -49159406 - AluY SINE Alu -16 295 1 889 131 0 0 chr17 36279079 36279209 -49159271 - AluSq/x SINE Alu -180 133 4 228 135 0 0 chr17 36279857 36279894 -49158586 + (CA)n Simple_repeat Simple_repeat 2 38 0 1258 95 0 22 chr17 36279894 36280007 -49158473 - AluSc SINE Alu -65 244 135 2362 73 3 0 chr17 36280007 36280308 -49158172 - AluY SINE Alu -9 302 1 1258 95 0 22 chr17 36280308 36280373 -49158107 - AluSc SINE Alu -174 135 70 618 216 0 0 chr17 36280373 36280484 -49157996 - FLAM_C SINE Alu -31 112 2 393 22 0 0 chr17 36280491 36280537 -49157943 + (CA)n Simple_repeat Simple_repeat 1 46 0 2004 96 36 0 chr17 36280539 36280819 -49157661 - AluSx SINE Alu -22 290 1 29 28 0 0 chr17 36281332 36281368 -49157112 + AT_rich Low_complexity Low_complexity 1 36 0 1978 110 7 4 chr17 36282109 36282416 -49156064 - AluSg SINE Alu 0 308 1 463 153 118 118 chr17 36282565 36282735 -49155745 + L1MC5 LINE L1 7762 7931 -30 1654 156 7 14 chr17 36282753 36283035 -49155445 + AluJb SINE Alu 1 280 -32 338 250 0 57 chr17 36283035 36283123 -49155357 - L1MC4 LINE L1 -1314 6728 6646 222 139 0 47 chr17 36283126 36283169 -49155311 - L2 LINE L2 -4 3309 3269 1058 180 4 69 chr17 36283183 36283259 -49155221 + AluJo SINE Alu 64 143 -169 2066 126 7 0 chr17 36283259 36283568 -49154912 + AluSx SINE Alu 1 311 -1 1058 180 4 69 chr17 36283568 36283736 -49154744 + AluJo SINE Alu 143 292 -20 1589 189 0 10 chr17 36283750 36284046 -49154434 + AluJo SINE Alu 1 293 -19 470 349 35 42 chr17 36284121 36284405 -49154075 - L2 LINE L2 -390 2924 2643 245 326 45 103 chr17 36284404 36284646 -49153834 + L2 LINE L2 3030 3257 -15 * 2838 13 0 0 chr17 36284762 36285080 -49153400 + AluYb8 SINE Alu 1 318 0 348 272 228 22 chr17 36285204 36285340 -49153140 + L2 LINE L2 3109 3272 0 213 39 0 0 chr17 36285379 36285405 -49153075 + (TA)n Simple_repeat Simple_repeat 2 27 0 2205 100 3 0 chr17 36285406 36285717 -49152763 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 36286494 36286522 -49151958 + AT_rich Low_complexity Low_complexity 1 28 0 430 274 17 20 chr17 36286522 36286669 -49151811 - MIR SINE MIR -62 146 31 2279 78 0 3 chr17 36286761 36287067 -49151413 + AluY SINE Alu 1 305 -6 1744 109 0 0 chr17 36287121 36287359 -49151121 + AluSx SINE Alu 50 287 -25 29 0 0 0 chr17 36287359 36287388 -49151092 + AT_rich Low_complexity Low_complexity 1 29 0 240 235 0 0 chr17 36288107 36288158 -49150322 + (TA)n Simple_repeat Simple_repeat 1 51 0 885 160 7 0 chr17 36288380 36288553 -49149927 + FRAM SINE Alu 2 175 0 1981 131 0 7 chr17 36289502 36289799 -49148681 - AluSx SINE Alu -16 296 2 2161 68 3 55 chr17 36290541 36290850 -49147630 + AluSg SINE Alu 2 294 -16 23 33 0 0 chr17 36292074 36292104 -49146376 + AT_rich Low_complexity Low_complexity 1 30 0 1817 134 21 3 chr17 36292327 36292611 -49145869 - AluSx SINE Alu -23 289 1 1822 127 3 56 chr17 36292621 36292945 -49145535 - AluSg SINE Alu -3 307 1 216 0 0 0 chr17 36292954 36292978 -49145502 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 1946 108 4 7 chr17 36292978 36293251 -49145229 - AluSx SINE Alu -32 280 9 6689 57 3 81 chr17 36293458 36294771 -49143709 + SVA Other Other 432 1434 0 2062 125 0 10 chr17 36294918 36295231 -49143249 + AluSq SINE Alu 1 310 -3 735 190 0 7 chr17 36296422 36296564 -49141916 - FLAM_C SINE Alu -1 142 2 2152 113 3 0 chr17 36296658 36296968 -49141512 - AluSx SINE Alu -1 311 1 2141 119 0 0 chr17 36297089 36297400 -49141080 - AluSx SINE Alu -1 311 1 375 23 0 0 chr17 36297589 36297633 -49140847 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 111 0 0 chr17 36298799 36298826 -49139654 + (T)n Simple_repeat Simple_repeat 1 27 0 2148 86 38 0 chr17 36299736 36300026 -49138454 + AluSg1 SINE Alu 1 301 -8 1124 133 0 11 chr17 36300026 36300207 -49138273 + AluSg/x SINE Alu 134 312 0 2187 98 3 0 chr17 36300213 36300499 -49137981 + AluSp SINE Alu 1 287 -26 259 297 14 14 chr17 36300518 36300592 -49137888 - MIR SINE MIR -187 75 2 995 105 0 0 chr17 36300751 36300884 -49137596 - FLAM_C SINE Alu 0 133 1 414 0 0 0 chr17 36301033 36301079 -49137401 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1587 61 0 0 chr17 36301082 36301278 -49137202 - AluY SINE Alu -31 280 85 229 305 171 2 chr17 36302096 36302249 -49136231 + MIR3 SINE MIR 2 183 -69 207 0 0 0 chr17 36302824 36302847 -49135633 + (CA)n Simple_repeat Simple_repeat 2 24 0 232 145 16 32 chr17 36302865 36302927 -49135553 + (CA)n Simple_repeat Simple_repeat 2 62 0 186 103 0 0 chr17 36303144 36303173 -49135307 + (CA)n Simple_repeat Simple_repeat 1 29 0 195 42 0 0 chr17 36303520 36303544 -49134936 + (CAGCC)n Simple_repeat Simple_repeat 3 26 0 1753 141 3 61 chr17 36306450 36306572 -49131908 + AluJo SINE Alu 1 129 -183 1919 112 32 4 chr17 36306572 36306850 -49131630 - AluSx SINE Alu -13 299 14 1753 141 3 61 chr17 36306850 36307054 -49131426 + AluJo SINE Alu 129 308 -4 210 171 0 0 chr17 36307305 36307340 -49131140 + A-rich Low_complexity Low_complexity 1 35 0 637 279 228 13 chr17 36307478 36307845 -49130635 + L2 LINE L2 2555 2842 -471 2162 109 3 3 chr17 36307845 36308149 -49130331 - AluSq SINE Alu -9 304 1 2005 102 17 24 chr17 36308156 36308451 -49130029 - AluSx SINE Alu -19 293 1 637 279 228 13 chr17 36308451 36308647 -49129833 + L2 LINE L2 2846 3264 -49 360 94 0 0 chr17 36310002 36310055 -49128425 + (TG)n Simple_repeat Simple_repeat 2 54 0 414 268 65 0 chr17 36310540 36310663 -49127817 + MIR SINE MIR 76 206 -56 2224 92 3 3 chr17 36310706 36311009 -49127471 - AluSx SINE Alu -9 303 1 304 311 62 25 chr17 36311090 36311251 -49127229 - MIR SINE MIR -12 250 84 203 145 40 105 chr17 36312269 36312345 -49126135 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 2047 111 0 26 chr17 36312635 36312941 -49125539 + AluSx SINE Alu 1 298 -14 266 295 180 16 chr17 36313214 36313336 -49125144 - MIR SINE MIR -35 227 86 2076 111 0 0 chr17 36313706 36313995 -49124485 + AluSx SINE Alu 1 289 -23 477 264 61 31 chr17 36313995 36314158 -49124322 + MER5A DNA MER1_type 17 184 -5 1382 206 49 61 chr17 36314171 36314516 -49123964 + MER58B DNA MER1_type 1 341 0 1870 144 7 0 chr17 36314681 36314965 -49123515 + AluSx SINE Alu 1 286 -26 302 0 0 26 chr17 36314967 36315006 -49123474 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 2204 96 0 3 chr17 36315101 36315403 -49123077 - AluSg SINE Alu -9 301 1 357 262 39 0 chr17 36316761 36316864 -49121616 + MIR3 SINE MIR 82 188 -20 256 200 92 0 chr17 36317169 36317234 -49121246 - MIR SINE MIR -113 149 79 252 245 255 0 chr17 36317319 36317425 -49121055 - MER94 DNA DNA -1 133 1 249 266 271 36 chr17 36318107 36318155 -49120325 - MIR SINE MIR -24 238 203 1750 149 7 17 chr17 36318155 36318483 -49119997 - AluSx SINE Alu 0 312 1 249 266 271 36 chr17 36318483 36318626 -49119854 - MIR SINE MIR -59 203 2 1783 143 3 13 chr17 36318649 36318950 -49119530 - AluJo SINE Alu -10 302 5 1107 215 213 35 chr17 36318983 36319178 -49119302 + L1ME3A LINE L1 5392 5551 -619 2030 92 16 30 chr17 36319178 36319483 -49118997 - AluY SINE Alu -10 301 1 1107 215 213 35 chr17 36319483 36319775 -49118705 + L1ME3A LINE L1 5551 5966 -204 266 232 125 18 chr17 36319810 36319922 -49118558 + LTR37B LTR ERV1 51 174 -294 328 207 93 125 chr17 36319985 36320109 -49118371 + LTR37B LTR ERV1 198 324 -144 2259 110 0 0 chr17 36320109 36320418 -49118062 - AluSx SINE Alu -3 309 1 328 207 93 125 chr17 36320418 36320573 -49117907 + LTR37B LTR ERV1 324 468 0 1290 180 36 102 chr17 36321041 36321346 -49117134 + AluJo SINE Alu 3 287 -15 307 222 56 14 chr17 36321403 36321475 -49117005 - MIR SINE MIR -79 183 109 2159 115 0 6 chr17 36321726 36322040 -49116440 + AluSx SINE Alu 1 312 0 738 109 78 55 chr17 36322221 36322349 -49116131 + FLAM_C SINE Alu 3 133 0 1694 168 3 0 chr17 36322368 36322660 -49115820 + AluJo SINE Alu 1 293 -19 2342 75 0 7 chr17 36322662 36322968 -49115512 + AluY SINE Alu 1 304 -7 514 316 6 18 chr17 36323050 36323221 -49115259 - MER5A DNA MER1_type -2 187 19 2366 84 0 0 chr17 36324039 36324336 -49114144 - AluSc SINE Alu -12 297 1 1611 159 7 66 chr17 36324337 36324626 -49113854 - AluJo SINE Alu -18 294 23 1993 88 70 18 chr17 36324699 36324983 -49113497 + AluSx SINE Alu 1 299 -13 259 248 25 83 chr17 36325004 36325125 -49113355 - MER112 DNA MER1_type -144 116 3 483 299 13 57 chr17 36326493 36326759 -49111721 - MIR SINE MIR 0 262 5 183 288 14 41 chr17 36327105 36327178 -49111302 + L3b LINE CR1 1350 1420 -163 347 248 24 2 chr17 36327899 36328013 -49110467 + MIR SINE MIR 38 152 -62 332 253 228 6 chr17 36328301 36328459 -49110021 + MIR3 SINE MIR 5 197 -11 1911 92 38 20 chr17 36329114 36329407 -49109073 + AluSx SINE Alu 2 299 -13 765 124 31 23 chr17 36329431 36329560 -49108920 + FLAM_C SINE Alu 13 142 -1 2037 133 0 10 chr17 36329691 36329999 -49108481 + AluJb SINE Alu 1 305 -7 571 289 129 0 chr17 36330130 36330331 -49108149 - MIR SINE MIR 0 262 36 213 327 25 66 chr17 36331004 36331131 -49107349 - MIR SINE MIR -62 146 45 465 237 69 40 chr17 36331311 36331484 -49106996 + MER5A DNA MER1_type 7 184 -5 482 322 78 24 chr17 36331514 36331719 -49106761 + MIR SINE MIR 17 232 -30 279 203 0 0 chr17 36331719 36331778 -49106702 + (CA)n Simple_repeat Simple_repeat 1 59 0 360 0 0 0 chr17 36332137 36332177 -49106303 + (TG)n Simple_repeat Simple_repeat 2 41 0 1662 185 20 0 chr17 36332618 36332916 -49105564 - AluJo SINE Alu -8 304 1 231 337 79 0 chr17 36333025 36333126 -49105354 + MIR SINE MIR 106 214 -48 428 248 51 22 chr17 36333156 36333293 -49105187 + MIR SINE MIR 68 208 -54 183 80 0 0 chr17 36333511 36333536 -49104944 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 2037 125 87 12 chr17 36334944 36335279 -49103201 - MER46B DNA MER2_type 0 236 2 2159 100 0 3 chr17 36335299 36335616 -49102864 + AluSg SINE Alu 1 316 0 503 287 122 16 chr17 36335631 36335819 -49102661 - MIR SINE MIR -43 219 12 264 177 48 16 chr17 36335892 36335954 -49102526 - MIR3 SINE MIR -21 187 124 369 260 96 51 chr17 36335970 36336147 -49102333 + L2 LINE L2 3129 3313 0 2097 123 10 0 chr17 36336151 36336444 -49102036 + AluSx SINE Alu 1 296 -16 227 215 77 0 chr17 36336983 36337048 -49101432 + MIR SINE MIR 59 128 -80 786 180 7 0 chr17 36337695 36337834 -49100646 + FLAM_C SINE Alu 1 140 -3 527 108 10 0 chr17 36338545 36338647 -49099833 + (GA)n Simple_repeat Simple_repeat 1 103 0 300 293 49 24 chr17 36339386 36339509 -49098971 - MIR SINE MIR -48 214 89 2045 105 0 0 chr17 36339764 36340041 -49098439 + AluSx SINE Alu 27 303 -9 2290 85 3 13 chr17 36340041 36340356 -49098124 + AluSq SINE Alu 1 313 0 186 43 0 0 chr17 36340966 36340989 -49097491 + (A)n Simple_repeat Simple_repeat 1 23 0 238 180 33 49 chr17 36341053 36341114 -49097366 + MIR3 SINE MIR 116 175 -33 1647 159 69 3 chr17 36341323 36341613 -49096867 - AluJb SINE Alu -3 309 1 2236 84 20 0 chr17 36342183 36342480 -49096000 + AluSx SINE Alu 1 303 -9 1063 132 23 87 chr17 36343264 36343483 -49094997 + AluJb SINE Alu 108 312 0 219 244 0 0 chr17 36343509 36343554 -49094926 + MIR SINE MIR 205 249 -13 1965 125 17 7 chr17 36343591 36343905 -49094575 - AluSx SINE Alu 0 312 1 229 286 0 78 chr17 36344889 36344966 -49093514 + L2 LINE L2 3200 3270 -2 27 29 0 0 chr17 36345230 36345264 -49093216 + AT_rich Low_complexity Low_complexity 1 34 0 2023 116 16 13 chr17 36345272 36345583 -49092897 + AluSx SINE Alu 1 312 0 261 75 0 0 chr17 36345730 36345770 -49092710 + (GGATG)n Simple_repeat Simple_repeat 3 42 0 259 341 71 0 chr17 36346208 36346334 -49092146 + MIR SINE MIR 3 137 -125 205 235 39 0 chr17 36346371 36346422 -49092058 + MIR SINE MIR 138 190 -72 393 314 58 12 chr17 36347409 36347581 -49090899 + MIR SINE MIR 64 243 -19 1989 56 116 4 chr17 36347727 36347995 -49090485 + AluY SINE Alu 1 298 -13 1996 112 0 11 chr17 36348065 36348385 -49090095 + AluSx SINE Alu 1 317 0 1281 116 0 0 chr17 36348386 36348558 -49089922 + AluSg/x SINE Alu 135 306 -4 315 0 0 0 chr17 36349637 36349672 -49088808 + (CA)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr17 36351168 36351198 -49087282 + AT_rich Low_complexity Low_complexity 1 30 0 268 164 0 33 chr17 36351655 36351716 -49086764 + L2 LINE L2 3255 3313 0 242 268 171 12 chr17 36352527 36352646 -49085834 - MIR SINE MIR -63 145 33 645 27 0 0 chr17 36355365 36355438 -49083042 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 210 71 0 0 chr17 36355516 36355544 -49082936 + (A)n Simple_repeat Simple_repeat 1 28 0 957 123 159 0 chr17 36355946 36356109 -49082371 - MER5A DNA MER1_type 0 189 1 629 41 0 0 chr17 36357011 36357084 -49081396 - tRNA-Cys-TGC tRNA tRNA -2 73 1 1930 82 0 79 chr17 36357234 36357552 -49080928 + AluSg SINE Alu 1 293 -17 1983 90 55 17 chr17 36357625 36357915 -49080565 - AluSg SINE Alu -9 301 1 207 0 0 0 chr17 36357925 36357948 -49080532 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2051 113 3 0 chr17 36358009 36358291 -49080189 - AluSp SINE Alu -30 283 1 319 58 0 186 chr17 36358403 36358489 -49079991 + AluSp/q SINE Alu 234 303 0 1686 138 56 0 chr17 36358491 36358795 -49079685 + L1MB1 LINE L1 5813 6133 -35 1595 167 89 11 chr17 36358797 36359079 -49079401 + AluJb SINE Alu 2 305 -7 244 238 0 48 chr17 36359080 36359143 -49079337 - L2 LINE L2 -679 2635 2576 2311 172 15 77 chr17 36359146 36359260 -49079220 - MLT1D LTR MaLR -2 503 384 2215 108 0 0 chr17 36359260 36359556 -49078924 + AluSg SINE Alu 1 296 -14 2311 172 15 77 chr17 36359556 36359977 -49078503 - MLT1D LTR MaLR -121 384 1 2085 129 3 0 chr17 36360020 36360331 -49078149 + AluSx SINE Alu 1 312 0 2111 131 0 3 chr17 36360332 36360644 -49077836 + AluSq SINE Alu 2 312 -1 2215 91 3 3 chr17 36360824 36361132 -49077348 + AluY SINE Alu 1 308 -3 509 340 127 0 chr17 36361133 36361401 -49077079 - L2 LINE L2 -1924 1390 1089 183 308 8 90 chr17 36361404 36361492 -49076988 - L2 LINE L2 -33 3280 3205 1969 120 24 0 chr17 36361492 36361784 -49076696 + AluSx SINE Alu 1 299 -13 183 308 8 90 chr17 36361784 36361828 -49076652 - L2 LINE L2 -108 3205 3159 2336 60 7 0 chr17 36361838 36362139 -49076341 + AluSp SINE Alu 1 303 -10 2011 92 3 19 chr17 36362374 36362688 -49075792 + AluY SINE Alu 1 309 -2 593 54 0 14 chr17 36362966 36363040 -49075440 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 2116 107 7 0 chr17 36363310 36363601 -49074879 - AluSx SINE Alu -19 293 1 2225 52 0 45 chr17 36363617 36363927 -49074553 - AluY SINE Alu -15 296 1 835 208 63 53 chr17 36363948 36364207 -49074273 + Charlie1b DNA MER1_type 44 310 -2451 1434 178 87 8 chr17 36364207 36364492 -49073988 - AluJb SINE Alu 0 306 1 835 208 63 53 chr17 36364492 36364548 -49073932 + Charlie1b DNA MER1_type 310 364 -159 28 71 0 0 chr17 36364671 36364727 -49073753 + GC_rich Low_complexity Low_complexity 1 56 0 1923 129 0 37 chr17 36365008 36365325 -49073155 - AluSq SINE Alu 0 306 1 1197 195 70 79 chr17 36365423 36365461 -49073019 - Charlie1b DNA MER1_type -2240 521 484 2284 101 0 7 chr17 36365461 36365769 -49072711 - AluSx SINE Alu -6 306 1 2111 108 3 0 chr17 36365770 36366065 -49072415 - AluSp SINE Alu -17 296 1 1197 195 70 79 chr17 36366065 36366245 -49072235 - Charlie1b DNA MER1_type -2277 484 304 1530 150 87 0 chr17 36366245 36366519 -49071961 + AluJb SINE Alu 11 306 0 1197 195 70 79 chr17 36366519 36366777 -49071703 - Charlie1b DNA MER1_type -2457 304 44 2182 56 7 36 chr17 36366798 36367102 -49071378 + AluY SINE Alu 1 295 -16 1551 104 0 9 chr17 36367118 36367339 -49071141 + AluSp SINE Alu 1 219 -94 279 213 28 46 chr17 36367810 36367918 -49070562 + (CGGGG)n Simple_repeat Simple_repeat 4 109 0 25 0 0 0 chr17 36368011 36368036 -49070444 + GC_rich Low_complexity Low_complexity 1 25 0 197 283 67 42 chr17 36368826 36368946 -49069534 + L3 LINE CR1 1188 1310 -267 247 302 0 0 chr17 36369850 36369913 -49068567 - MIR SINE MIR -61 147 85 1232 142 19 52 chr17 36371108 36371293 -49067187 - L1M4 LINE L1 -567 5617 5442 2185 112 3 0 chr17 36371293 36371596 -49066884 - AluSx SINE Alu -8 304 1 1232 142 19 52 chr17 36371596 36371677 -49066803 - L1M4 LINE L1 -742 5442 5360 2101 137 0 0 chr17 36371678 36371984 -49066496 - AluSx SINE Alu -6 306 1 811 142 0 0 chr17 36371990 36372117 -49066363 - FLAM_C SINE Alu -5 138 12 1288 136 24 93 chr17 36372129 36372322 -49066158 - L1M4 LINE L1 -776 5370 5214 2471 97 0 0 chr17 36372322 36372633 -49065847 - AluSx SINE Alu -1 311 1 1288 136 24 93 chr17 36372633 36372815 -49065665 - L1M4 LINE L1 -932 5214 5021 464 144 0 22 chr17 36372816 36372906 -49065574 - FLAM_C SINE Alu -2 141 54 385 180 3 20 chr17 36372932 36372955 -49065525 - L1 LINE L1 -1086 5060 5038 2159 168 54 5 chr17 36372955 36373396 -49065084 - L1MB1 LINE L1 -1 6167 5705 385 180 3 20 chr17 36373396 36373493 -49064987 - L1 LINE L1 -1108 5038 4940 2022 148 0 3 chr17 36373548 36373852 -49064628 - AluJb SINE Alu 0 312 10 2461 82 3 0 chr17 36373906 36374210 -49064270 + AluSx SINE Alu 1 305 -7 2408 88 0 0 chr17 36374221 36374516 -49063964 + AluSx SINE Alu 1 295 -17 335 137 41 41 chr17 36374954 36375027 -49063453 - L1MB1 LINE L1 -317 5851 5779 1402 190 21 4 chr17 36375040 36375282 -49063198 + AluJb SINE Alu 35 280 -32 252 0 0 0 chr17 36375282 36375310 -49063170 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 2346 77 0 23 chr17 36375354 36375654 -49062826 - AluY SINE Alu -18 293 1 1463 163 90 10 chr17 36375664 36375953 -49062527 - AluJo SINE Alu 0 312 1 1224 83 12 153 chr17 36376725 36376979 -49061501 - AluY SINE Alu -1 310 93 1345 135 8 81 chr17 36376998 36377257 -49061223 - AluJb SINE Alu -33 279 40 2356 64 3 41 chr17 36377972 36378286 -49060194 - AluY SINE Alu -9 302 1 939 181 0 0 chr17 36378296 36378451 -49060029 - AluSg/x SINE Alu 0 312 158 764 128 0 0 chr17 36378451 36378560 -49059920 - AluJb SINE Alu -197 115 7 718 208 6 6 chr17 36378679 36378838 -49059642 - AluSg/x SINE Alu 0 310 152 367 324 28 0 chr17 36379703 36379848 -49058632 - MIR SINE MIR -112 150 2 2275 119 0 3 chr17 36379882 36380194 -49058286 - AluSq SINE Alu -2 311 1 349 191 0 29 chr17 36380626 36380694 -49057786 - AluYb8 SINE Alu -6 302 237 554 94 35 0 chr17 36380697 36380782 -49057698 + AluS SINE Alu 4 91 -221 2176 121 0 29 chr17 36383274 36383588 -49054892 - AluSx SINE Alu -7 305 1 220 208 0 0 chr17 36383983 36384036 -49054444 + A-rich Low_complexity Low_complexity 2 54 0 411 83 0 0 chr17 36384742 36384802 -49053678 + (CA)n Simple_repeat Simple_repeat 2 61 0 216 0 0 0 chr17 36386882 36386906 -49051574 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1825 132 40 4 chr17 36386908 36387181 -49051299 - AluSx SINE Alu -29 283 1 2355 73 7 10 chr17 36387665 36387966 -49050514 - AluSp SINE Alu -13 300 1 1010 114 0 0 chr17 36387990 36388121 -49050359 - AluSg SINE Alu -179 131 1 434 198 47 0 chr17 36388123 36388209 -49050271 - AluJ/FLAM SINE Alu -222 90 1 222 333 61 10 chr17 36388352 36388451 -49050029 - L2 LINE L2 0 3272 3169 368 218 127 9 chr17 36388776 36388886 -49049594 + L2 LINE L2 3191 3313 0 213 336 34 34 chr17 36389230 36389438 -49049042 - L2 LINE L2 -1066 2248 2041 410 63 0 16 chr17 36389762 36389825 -49048655 + (TG)n Simple_repeat Simple_repeat 2 63 0 2255 106 0 3 chr17 36389879 36390172 -49048308 + AluSx SINE Alu 1 292 -20 1672 171 0 4 chr17 36390200 36390457 -49048023 + AluJb SINE Alu 34 289 -23 1071 101 0 7 chr17 36390492 36390630 -49047850 + AluSq/x SINE Alu 1 137 -175 2290 59 0 56 chr17 36391849 36392173 -49046307 - AluY SINE Alu -5 306 1 268 350 31 38 chr17 36394042 36394202 -49044278 - L3b LINE CR1 -11 1572 1414 2356 93 0 26 chr17 36394470 36394780 -49043700 + AluSx SINE Alu 1 302 -10 311 146 55 82 chr17 36394857 36394892 -49043588 + HAL1 LINE L1 1231 1265 -1242 1647 153 17 49 chr17 36394892 36395179 -49043301 + AluJo SINE Alu 2 279 -33 311 146 55 82 chr17 36395179 36395253 -49043227 + HAL1 LINE L1 1265 1337 -1170 316 254 11 103 chr17 36395256 36395441 -49043039 + HAL1 LINE L1 2035 2202 -305 931 129 0 14 chr17 36395530 36395669 -49042811 + AluSq/x SINE Alu 1 137 -176 2208 86 10 42 chr17 36395669 36395982 -49042498 + AluSx SINE Alu 1 303 -9 2146 105 0 42 chr17 36396361 36396674 -49041806 - AluSp SINE Alu -13 300 1 1005 147 6 0 chr17 36396956 36397113 -49041367 + FRAM SINE Alu 1 158 -8 367 168 0 15 chr17 36397122 36397196 -49041284 + AluJb SINE Alu 67 126 -176 808 86 18 0 chr17 36397207 36397330 -49041150 - L1MC/D LINE L1 -596 5588 5468 2247 125 3 0 chr17 36397344 36397649 -49040831 + AluSx SINE Alu 4 309 -3 2522 64 0 22 chr17 36397679 36397990 -49040490 + AluY SINE Alu 1 304 -7 1324 158 77 35 chr17 36398458 36398495 -49039985 + MLT1J LTR MaLR 6 40 -471 2031 141 13 0 chr17 36398495 36398794 -49039686 - AluSx SINE Alu -9 303 1 1324 158 77 35 chr17 36398794 36399167 -49039313 + MLT1J LTR MaLR 40 485 -26 1242 173 0 5 chr17 36399400 36399591 -49038889 - AluJ SINE Alu -12 300 111 318 208 0 0 chr17 36399602 36399655 -49038825 + L1MC4 LINE L1 6650 6702 -1340 370 322 0 0 chr17 36399662 36399752 -49038728 - L1MC4 LINE L1 -1339 6703 6614 837 103 0 26 chr17 36399755 36399872 -49038608 - AluJ SINE Alu -186 126 13 969 144 0 13 chr17 36399884 36400037 -49038443 - FRAM SINE Alu -11 165 15 1965 141 0 10 chr17 36400041 36400332 -49038148 - AluSq SINE Alu -20 293 6 207 173 0 39 chr17 36400344 36400396 -49038084 + T-rich Low_complexity Low_complexity 6 55 0 805 107 149 20 chr17 36400419 36400431 -49038049 - L1MB3 LINE L1 0 6184 6175 2000 90 83 42 chr17 36400431 36400720 -49037760 - AluSx SINE Alu -11 301 1 805 107 149 20 chr17 36400720 36400882 -49037598 - L1MB3 LINE L1 -9 6175 6007 2287 101 0 13 chr17 36400883 36401189 -49037291 + AluSx SINE Alu 1 302 -10 2025 129 0 37 chr17 36401327 36401648 -49036832 + AluSq SINE Alu 1 310 0 2008 125 10 16 chr17 36401889 36402201 -49036279 - AluSx SINE Alu -2 310 1 1786 235 85 16 chr17 36402439 36402834 -49035646 + L2 LINE L2 2389 2830 -484 1937 121 7 14 chr17 36402834 36403116 -49035364 - AluSx SINE Alu -23 289 10 1786 235 85 16 chr17 36403116 36403235 -49035245 + L2 LINE L2 2830 2939 -375 1371 183 55 26 chr17 36403245 36403369 -49035111 - AluJo SINE Alu -29 283 164 180 0 0 0 chr17 36403369 36403389 -49035091 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1947 133 0 14 chr17 36403389 36403674 -49034806 - AluSx SINE Alu -31 281 1 1371 183 55 26 chr17 36403674 36403821 -49034659 - AluJo SINE Alu -147 165 3 1914 125 10 14 chr17 36403836 36404125 -49034355 - AluSx SINE Alu -14 298 11 335 191 0 0 chr17 36404125 36404188 -49034292 - AluSg/x SINE Alu -156 144 82 1209 145 9 53 chr17 36404188 36404278 -49034202 - AluSx SINE Alu -94 218 126 2076 70 3 44 chr17 36404278 36404600 -49033880 - AluSp SINE Alu 0 310 1 1209 145 9 53 chr17 36404600 36404736 -49033744 - AluSx SINE Alu -186 126 1 230 232 0 0 chr17 36404754 36404823 -49033657 + (TA)n Simple_repeat Simple_repeat 2 70 0 230 51 51 0 chr17 36404824 36404863 -49033617 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 718 70 0 0 chr17 36404869 36404969 -49033511 + AluSp/q SINE Alu 213 312 -1 2273 73 0 7 chr17 36405520 36405807 -49032673 - AluSg SINE Alu -25 285 1 236 27 0 54 chr17 36405820 36405857 -49032623 - U2 snRNA snRNA -153 35 1 516 184 22 140 chr17 36405861 36406089 -49032391 + L2 LINE L2 3113 3313 0 2163 103 7 13 chr17 36406148 36406449 -49032031 + AluSx SINE Alu 1 299 -13 551 95 0 63 chr17 36408321 36408451 -49030029 - AluSg/x SINE Alu 0 309 199 1161 124 12 0 chr17 36408495 36408664 -49029816 - AluSg/x SINE Alu -10 300 130 547 200 22 30 chr17 36410004 36410139 -49028341 + AluJb SINE Alu 70 203 -109 216 0 0 0 chr17 36410491 36410515 -49027965 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1138 155 11 6 chr17 36410685 36410859 -49027621 - AluSq SINE Alu -96 217 43 1678 130 52 26 chr17 36411106 36411376 -49027104 + AluSg SINE Alu 1 277 -33 479 217 101 8 chr17 36412035 36412164 -49026316 + MER5B DNA MER1_type 35 175 -3 1842 150 25 0 chr17 36412215 36412501 -49025979 + AluSx SINE Alu 3 295 -17 553 282 35 6 chr17 36412670 36412844 -49025636 - AluJo SINE Alu -19 293 115 1755 106 4 0 chr17 36412905 36413131 -49025349 + AluSx SINE Alu 1 227 -85 1135 100 0 0 chr17 36413192 36413342 -49025138 - AluSq SINE Alu -43 270 121 2384 82 6 13 chr17 36413345 36413660 -49024820 - AluSp SINE Alu 0 313 1 269 208 0 11 chr17 36413828 36413901 -49024579 + AluSp SINE Alu 121 186 -117 966 168 62 0 chr17 36413928 36414089 -49024391 + FRAM SINE Alu 1 162 -14 2340 87 7 7 chr17 36414091 36414389 -49024091 + AluY SINE Alu 1 298 -13 2221 121 0 3 chr17 36414399 36414697 -49023783 + AluSq SINE Alu 1 297 -16 2302 117 3 0 chr17 36414697 36415005 -49023475 + AluSq SINE Alu 4 312 -1 2435 87 0 13 chr17 36415020 36415154 -49023326 + AluSg SINE Alu 1 135 -175 2460 67 0 10 chr17 36415154 36415454 -49023026 + AluY SINE Alu 1 297 -14 2435 87 0 13 chr17 36415454 36415629 -49022851 + AluSg SINE Alu 135 306 -4 1060 150 53 0 chr17 36415658 36415845 -49022635 + AluSg/x SINE Alu 106 302 -8 1666 198 3 0 chr17 36415977 36416275 -49022205 + AluSq SINE Alu 1 299 -14 896 116 0 22 chr17 36416311 36416449 -49022031 + AluSq/x SINE Alu 2 136 -176 1364 128 202 8 chr17 36416449 36416692 -49021788 + AluSg1 SINE Alu 16 305 -4 2573 60 3 0 chr17 36416705 36417005 -49021475 + AluSp SINE Alu 1 301 -12 2244 97 21 0 chr17 36417015 36417305 -49021175 + AluSx SINE Alu 1 296 -16 812 152 0 0 chr17 36417306 36417438 -49021042 + AluSg/x SINE Alu 132 263 -47 273 161 49 0 chr17 36417446 36417527 -49020953 + (TA)n Simple_repeat Simple_repeat 2 86 0 2113 124 0 0 chr17 36417530 36417812 -49020668 + AluSx SINE Alu 1 282 -30 917 18 9 0 chr17 36417812 36417923 -49020557 + (TAGA)n Simple_repeat Simple_repeat 1 112 0 2159 97 0 4 chr17 36417935 36418254 -49020226 + AluSg1 SINE Alu 3 320 0 2523 35 11 0 chr17 36418328 36418615 -49019865 - AluY SINE Alu -21 290 1 1438 166 90 10 chr17 36418624 36418913 -49019567 - AluJo SINE Alu 0 312 1 1211 87 12 153 chr17 36419685 36419939 -49018541 - AluY SINE Alu -1 310 93 1321 133 8 95 chr17 36419958 36420221 -49018259 - AluJb SINE Alu -33 279 40 2356 64 3 41 chr17 36420938 36421252 -49017228 - AluY SINE Alu -9 302 1 939 181 0 0 chr17 36421261 36421416 -49017064 - AluSg/x SINE Alu 0 310 156 764 128 0 0 chr17 36421416 36421525 -49016955 - AluJb SINE Alu -197 115 7 2458 102 0 3 chr17 36421643 36421956 -49016524 - AluSx SINE Alu 0 312 1 1014 132 40 7 chr17 36421974 36422126 -49016354 - FRAM SINE Alu -19 157 1 217 0 0 0 chr17 36422134 36422158 -49016322 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 1944 123 0 0 chr17 36422158 36422418 -49016062 - AluSx SINE Alu -29 283 24 22 35 0 0 chr17 36422436 36422465 -49016015 + AT_rich Low_complexity Low_complexity 1 29 0 626 281 130 0 chr17 36422502 36422576 -49015904 - MIR SINE MIR 0 262 199 2118 105 21 0 chr17 36422576 36422862 -49015618 + AluSx SINE Alu 1 292 -20 626 281 130 0 chr17 36422862 36423018 -49015462 - MIR SINE MIR -63 199 2 2300 115 0 3 chr17 36423052 36423364 -49015116 - AluSq SINE Alu -2 311 1 349 191 0 29 chr17 36423796 36423864 -49014616 - AluYb8 SINE Alu -6 302 237 2386 92 3 16 chr17 36423864 36424180 -49014300 + AluSx SINE Alu 1 312 0 1499 188 4 0 chr17 36424189 36424428 -49014052 - AluJb SINE Alu -60 252 13 2419 83 0 3 chr17 36424545 36424845 -49013635 + AluSg SINE Alu 1 299 -11 2551 53 7 3 chr17 36425951 36426250 -49012230 + AluY SINE Alu 1 300 -11 806 138 0 65 chr17 36426259 36426397 -49012083 + FLAM_C SINE Alu 1 129 -14 284 187 0 27 chr17 36426417 36426492 -49011988 + (TATATG)n Simple_repeat Simple_repeat 2 74 0 1919 92 52 15 chr17 36426509 36426781 -49011699 - AluSx SINE Alu -30 282 1 540 95 0 0 chr17 36426965 36427039 -49011441 + tRNA-Cys-TGC tRNA tRNA 1 74 -1 2365 74 3 7 chr17 36427375 36427671 -49010809 + AluSg SINE Alu 1 295 -15 1787 86 0 5 chr17 36427670 36427892 -49010588 + AluSg/x SINE Alu 74 294 -16 * 2483 75 13 0 chr17 36427892 36428199 -49010281 + AluY SINE Alu 1 311 0 370 324 158 27 chr17 36428204 36428328 -49010152 + HAL1 LINE L1 880 986 -1521 2031 114 45 0 chr17 36428328 36428617 -49009863 + AluSq SINE Alu 2 303 -10 2545 74 3 3 chr17 36428619 36428930 -49009550 + AluY SINE Alu 1 311 0 370 324 158 27 chr17 36428930 36429176 -49009304 + HAL1 LINE L1 986 1302 -1205 198 103 0 0 chr17 36429176 36429205 -49009275 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 1969 66 117 12 chr17 36429216 36429502 -49008978 + AluY SINE Alu 1 313 0 1973 147 3 23 chr17 36429572 36429879 -49008601 - AluJo SINE Alu -11 301 1 240 250 157 19 chr17 36429893 36430001 -49008479 - MER113 DNA MER1_type? -3 518 396 964 185 0 19 chr17 36430031 36430188 -49008292 - FRAM SINE Alu -22 154 1 281 143 0 0 chr17 36430222 36430264 -49008216 + Alu SINE Alu 1 42 -261 484 233 10 0 chr17 36430327 36430430 -49008050 + FLAM_A SINE Alu 8 111 -31 2447 74 0 7 chr17 36430500 36430797 -49007683 + AluSc SINE Alu 1 295 -14 2664 141 15 93 chr17 36430842 36431193 -49007287 - L1MB8 LINE L1 -1 6177 5800 2181 107 3 0 chr17 36431193 36431483 -49006997 - AluY SINE Alu -10 301 11 2664 141 15 93 chr17 36431483 36431599 -49006881 - L1MB8 LINE L1 -378 5800 5677 1506 173 71 42 chr17 36431599 36431882 -49006598 - AluSx SINE Alu -21 291 1 2664 141 15 93 chr17 36431882 36431942 -49006538 - L1MB8 LINE L1 -501 5677 5708 2209 122 0 7 chr17 36431942 36432246 -49006234 + AluSx SINE Alu 1 302 -10 2664 141 15 93 chr17 36432246 36432381 -49006099 - L1MB8 LINE L1 -469 5709 5565 879 170 0 0 chr17 36432396 36432537 -49005943 - FLAM_C SINE Alu -2 141 1 30 0 0 0 chr17 36432545 36432575 -49005905 + AT_rich Low_complexity Low_complexity 1 30 0 2186 108 3 7 chr17 36432576 36432862 -49005618 - AluSx SINE Alu -27 285 1 1916 140 7 0 chr17 36432865 36433143 -49005337 - AluJb SINE Alu -19 293 14 2501 80 3 3 chr17 36433205 36433516 -49004964 - AluSp SINE Alu -2 311 1 2232 113 3 13 chr17 36433518 36433828 -49004652 - AluSq SINE Alu -4 309 3 491 227 26 83 chr17 36433843 36433989 -49004491 + L1M4 LINE L1 4255 4387 -1759 2027 114 0 0 chr17 36433989 36434311 -49004169 + AluSx SINE Alu 21 342 0 491 227 26 83 chr17 36434311 36434391 -49004089 + L1M4 LINE L1 4387 4470 -1676 932 145 0 21 chr17 36434391 36434522 -49003958 + FLAM_C SINE Alu 1 130 -182 1830 113 79 10 chr17 36434522 36434814 -49003666 + AluSq SINE Alu 1 312 -1 932 145 0 21 chr17 36434814 36434827 -49003653 + FLAM_C SINE Alu 130 142 -170 2387 70 17 0 chr17 36436055 36436354 -49002126 - AluSp SINE Alu -9 304 1 881 151 26 116 chr17 36436764 36436996 -49001484 - MER20 DNA MER1_type 0 219 9 249 291 13 0 chr17 36436998 36437099 -49001381 + GA-rich Low_complexity Low_complexity 1 102 0 2402 87 3 10 chr17 36437302 36437611 -49000869 + AluSg SINE Alu 1 307 -3 2297 70 49 7 chr17 36437621 36437908 -49000572 + AluY SINE Alu 1 299 -12 240 88 0 0 chr17 36437908 36437942 -49000538 + Alu SINE Alu 134 167 -136 2294 105 3 0 chr17 36438397 36438691 -48999789 + AluSp SINE Alu 2 296 -17 2012 111 38 3 chr17 36438691 36438980 -48999500 + AluSg SINE Alu 1 299 -11 2139 118 13 7 chr17 36439174 36439480 -48999000 - AluSx SINE Alu -4 308 1 404 317 92 26 chr17 36439936 36440163 -48998317 + MIR SINE MIR 6 247 -15 1676 178 25 4 chr17 36440530 36440656 -48997824 + AluJo SINE Alu 1 123 -191 1912 153 22 35 chr17 36440656 36440787 -48997693 + AluSx SINE Alu 1 132 -180 2253 101 37 0 chr17 36440787 36441084 -48997396 + AluSx SINE Alu 1 308 -4 2221 105 7 16 chr17 36441088 36441392 -48997088 + AluSx SINE Alu 1 301 -11 1912 153 22 35 chr17 36441392 36441568 -48996912 + AluSx SINE Alu 135 309 -3 1676 178 25 4 chr17 36441568 36441749 -48996731 + AluJo SINE Alu 123 314 0 2599 52 13 0 chr17 36442141 36442447 -48996033 - AluY SINE Alu -1 310 1 2343 117 0 0 chr17 36442454 36442763 -48995717 - AluSg SINE Alu -1 309 1 185 0 0 39 chr17 36442763 36442789 -48995691 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2165 99 0 20 chr17 36442789 36442941 -48995539 - AluSx SINE Alu -26 286 132 222 37 0 0 chr17 36442941 36442968 -48995512 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2198 113 0 0 chr17 36442968 36443252 -48995228 - AluSc SINE Alu -25 284 1 2165 99 0 20 chr17 36443252 36443390 -48995090 - AluSx SINE Alu -178 134 1 2107 137 0 3 chr17 36443400 36443700 -48994780 - AluSg SINE Alu -11 299 1 2059 130 7 3 chr17 36443777 36444070 -48994410 + AluSg SINE Alu 1 294 -16 1927 142 16 26 chr17 36444207 36444516 -48993964 + AluJo SINE Alu 1 306 -6 2037 110 18 4 chr17 36445187 36445479 -48993001 - AluSx SINE Alu 0 302 7 2518 58 0 19 chr17 36445991 36446300 -48992180 - AluY SINE Alu -8 303 1 1255 64 19 0 chr17 36446329 36446485 -48991995 + AluYa5 SINE Alu 151 309 -2 460 222 0 0 chr17 36446497 36446596 -48991884 - L1MB3 LINE L1 -78 6105 6007 2491 81 0 0 chr17 36446598 36446907 -48991573 + AluY SINE Alu 1 309 -2 1840 166 0 0 chr17 36446915 36447192 -48991288 + AluJb SINE Alu 1 277 -35 2079 125 0 50 chr17 36447263 36447584 -48990896 - AluSx SINE Alu -7 305 1 1146 92 0 114 chr17 36447599 36447783 -48990697 - AluSg/x SINE Alu -17 293 131 1691 85 5 0 chr17 36448118 36448330 -48990150 - AluSp SINE Alu -17 296 84 2370 88 7 0 chr17 36448522 36448819 -48989661 + AluSp SINE Alu 1 299 -14 2355 84 0 26 chr17 36449197 36449505 -48988975 - AluY SINE Alu -9 302 3 2227 112 0 16 chr17 36449507 36449810 -48988670 - AluSg SINE Alu -12 298 1 2099 124 7 10 chr17 36449817 36450115 -48988365 - AluSx SINE Alu -9 303 7 252 149 0 0 chr17 36450181 36450228 -48988252 + (GAA)n Simple_repeat Simple_repeat 2 48 0 335 325 68 0 chr17 36450341 36450458 -48988022 - L2 LINE L2 0 3272 3148 2551 66 3 0 chr17 36451309 36451613 -48986867 - AluSx SINE Alu -7 305 1 420 208 139 0 chr17 36451658 36451759 -48986721 - FLAM_A SINE Alu -7 135 21 1428 97 0 31 chr17 36451786 36451962 -48986518 - AluSp SINE Alu -4 309 138 2126 134 3 0 chr17 36451962 36452260 -48986220 - AluSp SINE Alu -14 299 1 1428 97 0 31 chr17 36452260 36452279 -48986201 - AluSp SINE Alu -175 138 120 2359 102 3 0 chr17 36452353 36452656 -48985824 - AluSg SINE Alu -6 304 1 2408 94 10 3 chr17 36452673 36452982 -48985498 - AluY SINE Alu 0 311 1 1795 184 3 0 chr17 36452985 36453284 -48985196 - AluJo SINE Alu -12 300 1 2558 71 0 3 chr17 36453411 36453719 -48984761 - AluSx SINE Alu -5 307 1 2064 146 3 0 chr17 36454647 36454942 -48983538 + AluSx SINE Alu 1 296 -16 727 248 0 12 chr17 36454950 36455111 -48983369 + AluJo SINE Alu 127 285 -27 853 161 0 0 chr17 36455147 36455271 -48983209 + FLAM_C SINE Alu 3 126 -17 506 293 33 87 chr17 36455302 36455455 -48983025 - HAL1 LINE L1 -72 2435 2275 1980 155 0 37 chr17 36455455 36455633 -48982847 - AluSx SINE Alu -1 311 128 2460 90 0 0 chr17 36455633 36455932 -48982548 - AluSp SINE Alu -12 301 3 2315 81 27 3 chr17 36455938 36456234 -48982246 - AluSx SINE Alu -9 303 1 1980 155 0 37 chr17 36456234 36456371 -48982109 - AluSx SINE Alu -189 123 1 506 293 33 87 chr17 36456371 36456641 -48981839 - HAL1 LINE L1 -232 2275 2035 341 147 55 73 chr17 36456644 36456717 -48981763 - HAL1 LINE L1 -1170 1337 1265 1669 154 18 42 chr17 36456717 36457002 -48981478 - AluJo SINE Alu -33 279 2 341 147 55 73 chr17 36457002 36457037 -48981443 - HAL1 LINE L1 -1242 1265 1231 2445 84 0 0 chr17 36457114 36457411 -48981069 - AluSx SINE Alu -15 297 1 259 338 45 32 chr17 36457679 36457836 -48980644 + L3b LINE CR1 1414 1572 -11 2581 58 0 7 chr17 36459674 36459982 -48978498 + AluY SINE Alu 1 306 -5 266 209 29 48 chr17 36461106 36461213 -48977267 + (CGGGG)n Simple_repeat Simple_repeat 1 104 0 25 0 0 0 chr17 36461309 36461334 -48977146 + GC_rich Low_complexity Low_complexity 1 25 0 203 250 75 50 chr17 36462134 36462254 -48976226 + L3 LINE CR1 1188 1310 -267 236 302 0 0 chr17 36463158 36463221 -48975259 - MIR SINE MIR -61 147 85 1324 142 19 52 chr17 36464414 36464599 -48973881 - L1M4 LINE L1 -567 5617 5442 2264 116 3 0 chr17 36464599 36464902 -48973578 - AluSx SINE Alu -8 304 1 1324 142 19 52 chr17 36464902 36464983 -48973497 - L1M4 LINE L1 -742 5442 5360 2198 137 0 0 chr17 36464984 36465290 -48973190 - AluSx SINE Alu -6 306 1 839 142 0 0 chr17 36465296 36465423 -48973057 - FLAM_C SINE Alu -5 138 12 1389 127 26 98 chr17 36465435 36465629 -48972851 - L1M4 LINE L1 -776 5370 5214 2482 96 0 0 chr17 36465629 36465941 -48972539 - AluSx SINE Alu 0 312 1 1389 127 26 98 chr17 36465941 36466123 -48972357 - L1M4 LINE L1 -932 5214 5021 400 165 0 22 chr17 36466124 36466215 -48972265 - FLAM_C SINE Alu -1 142 54 385 180 3 20 chr17 36466241 36466264 -48972216 - L1 LINE L1 -1086 5060 5038 2141 170 54 5 chr17 36466264 36466705 -48971775 - L1MB1 LINE L1 -1 6167 5705 385 180 3 20 chr17 36466705 36466802 -48971678 - L1 LINE L1 -1108 5038 4940 2022 148 0 3 chr17 36466857 36467161 -48971319 - AluJb SINE Alu 0 312 10 2461 82 3 0 chr17 36467215 36467519 -48970961 + AluSx SINE Alu 1 305 -7 2422 85 0 0 chr17 36467530 36467825 -48970655 + AluSx SINE Alu 1 295 -17 335 137 41 41 chr17 36468263 36468336 -48970144 - L1MB1 LINE L1 -317 5851 5779 1443 187 20 4 chr17 36468349 36468595 -48969885 + AluJb SINE Alu 35 284 -28 2334 80 0 23 chr17 36468651 36468951 -48969529 - AluY SINE Alu -18 293 1 181 304 89 0 chr17 36468958 36469037 -48969443 + L2 LINE L2 3182 3267 -5 2418 80 26 0 chr17 36469050 36469352 -48969128 + AluSp SINE Alu 1 310 -3 315 275 9 28 chr17 36469362 36469471 -48969009 - L2 LINE L2 -494 2820 2714 2211 111 0 0 chr17 36470002 36470281 -48968199 + AluSg SINE Alu 1 279 -31 494 113 0 0 chr17 36470282 36470353 -48968127 - AluS SINE Alu -239 72 2 423 252 7 22 chr17 36470626 36470642 -48967838 - L1MA10 LINE L1 -4 6330 6315 967 201 57 38 chr17 36470642 36470905 -48967575 - L1ME2 LINE L1 -9 6155 5888 1726 163 13 48 chr17 36471619 36471798 -48966682 - AluJo SINE Alu -10 302 137 1807 115 32 8 chr17 36471798 36472051 -48966429 - AluSq SINE Alu -15 298 40 1726 163 13 48 chr17 36472051 36472184 -48966296 - AluJo SINE Alu -175 137 1 2328 82 0 0 chr17 36472259 36472539 -48965941 + AluY SINE Alu 1 280 -31 379 0 0 0 chr17 36472539 36472581 -48965899 + (TAAA)n Simple_repeat Simple_repeat 4 168 0 206 279 0 44 chr17 36472747 36472815 -48965665 - L2 LINE L2 -2 3311 3247 2188 118 0 13 chr17 36472861 36473176 -48965304 + AluSq SINE Alu 1 311 -2 227 241 19 0 chr17 36473308 36473362 -48965118 - L2 LINE L2 -208 3064 3010 1462 188 83 0 chr17 36473446 36473722 -48964758 + AluJo SINE Alu 1 299 -13 2168 89 6 22 chr17 36475053 36475369 -48963111 - AluSq SINE Alu -2 311 1 275 272 12 0 chr17 36475967 36476048 -48962432 - L1ME3A LINE L1 -9 6161 6080 259 282 261 7 chr17 36476057 36476199 -48962281 - MER5A DNA MER1_type -5 184 7 908 108 0 23 chr17 36476223 36476353 -48962127 + AluJo SINE Alu 1 127 -185 2129 113 3 3 chr17 36476862 36477164 -48961316 + AluSq SINE Alu 5 306 -7 2291 70 6 29 chr17 36477540 36477853 -48960627 - AluSq SINE Alu -7 306 1 1040 158 12 0 chr17 36478778 36478942 -48959538 + AluJo SINE Alu 133 298 -14 1914 149 0 0 chr17 36478942 36479238 -48959242 + AluJb SINE Alu 1 296 -16 278 302 75 4 chr17 36479713 36479835 -48958645 - MIR SINE MIR -31 177 48 310 311 52 121 chr17 36481775 36482254 -48956226 + L2 LINE L2 2826 3271 -1 1716 154 4 4 chr17 36483415 36483694 -48954786 + AluJo SINE Alu 22 300 -12 863 200 6 0 chr17 36483695 36483855 -48954625 + AluJb SINE Alu 134 294 -18 1023 108 12 30 chr17 36484101 36484267 -48954213 - AluSc SINE Alu 0 309 147 2299 139 26 55 chr17 36484267 36484489 -48953991 - L1MB3 LINE L1 -45 6138 5911 1965 97 64 17 chr17 36484489 36484787 -48953693 + AluSp SINE Alu 1 312 -1 2299 139 26 55 chr17 36484787 36484872 -48953608 - L1MB3 LINE L1 -272 5911 5825 2360 80 0 6 chr17 36484872 36485183 -48953297 - AluSc SINE Alu 0 309 1 2299 139 26 55 chr17 36485183 36485212 -48953268 - L1MB3 LINE L1 -358 5825 5797 1432 210 20 10 chr17 36485212 36485507 -48952973 + AluJo SINE Alu 1 298 -14 2295 61 0 14 chr17 36485507 36485795 -48952685 + AluY SINE Alu 1 286 -21 207 0 0 0 chr17 36485795 36485818 -48952662 + (CA)n Simple_repeat Simple_repeat 2 24 0 2299 139 26 55 chr17 36485822 36485887 -48952593 - L1MB3 LINE L1 -385 5798 5747 1510 206 46 90 chr17 36485887 36485961 -48952519 - MLT2D LTR ERVL 0 414 338 2449 68 0 6 chr17 36485961 36486272 -48952208 - AluY SINE Alu -2 309 1 1510 206 46 90 chr17 36486272 36486630 -48951850 - MLT2D LTR ERVL -76 338 1 2299 139 26 55 chr17 36486630 36486693 -48951787 - L1MB3 LINE L1 -436 5747 5684 185 363 12 0 chr17 36487282 36487362 -48951118 - MIR3 SINE MIR -31 177 97 333 215 224 0 chr17 36487548 36487655 -48950825 + MER112 DNA MER1_type 34 164 -96 674 101 0 73 chr17 36487658 36487767 -48950713 - Tigger7 DNA MER2_type 0 2587 2487 * 2702 155 45 23 chr17 36487744 36487878 -48950602 - Tigger7 DNA MER2_type -1961 526 396 2070 110 10 3 chr17 36487878 36488169 -48950311 + AluSx SINE Alu 1 293 -19 2702 155 45 23 chr17 36488169 36488549 -48949931 - Tigger7 DNA MER2_type -2091 396 1 233 323 21 0 chr17 36488549 36488636 -48949844 + MER112 DNA MER1_type 166 254 -6 1704 170 0 3 chr17 36488729 36489012 -48949468 - AluJo SINE Alu -30 282 1 637 102 31 0 chr17 36489187 36489285 -48949195 - AluJb SINE Alu -5 307 207 195 296 56 0 chr17 36489300 36489371 -48949109 + L2 LINE L2 3134 3208 -64 211 200 0 0 chr17 36489552 36489597 -48948883 + GA-rich Low_complexity Low_complexity 2 46 0 189 74 0 0 chr17 36493217 36493244 -48945236 + (TG)n Simple_repeat Simple_repeat 2 28 0 1601 166 64 0 chr17 36495260 36495543 -48942937 + AluJb SINE Alu 1 301 -11 21 0 0 0 chr17 36495608 36495629 -48942851 + GC_rich Low_complexity Low_complexity 1 21 0 766 162 221 0 chr17 36495738 36495892 -48942588 + MER5A DNA MER1_type 1 188 -1 428 282 74 0 chr17 36495940 36496089 -48942391 + MER5B DNA MER1_type 18 177 -1 355 326 154 0 chr17 36496205 36496380 -48942100 + MIR SINE MIR 49 250 -12 2386 69 0 7 chr17 36496957 36497261 -48941219 + AluSg SINE Alu 1 302 -8 2147 108 13 3 chr17 36497378 36497684 -48940796 - AluSx SINE Alu -3 309 1 304 252 39 58 chr17 36498554 36498657 -48939823 + MIR SINE MIR 53 153 -109 240 267 67 19 chr17 36498683 36498788 -48939692 + L2 LINE L2 2288 2397 -917 232 0 0 0 chr17 36499344 36499370 -48939110 + U6 snRNA snRNA 1 26 -81 2233 77 13 7 chr17 36499392 36499691 -48938789 - AluSp SINE Alu -12 301 1 345 295 50 14 chr17 36499691 36499830 -48938650 - MIR SINE MIR -79 183 40 2414 70 0 10 chr17 36500912 36501226 -48937254 + AluY SINE Alu 1 311 0 1498 197 45 3 chr17 36501262 36501552 -48936928 + Tigger5 DNA MER2_type 3 304 -2019 2151 75 7 0 chr17 36501692 36501994 -48936486 - AluY SINE Alu 0 304 1 1756 154 13 16 chr17 36502114 36502425 -48936055 + AluJo SINE Alu 1 310 -2 1352 116 11 0 chr17 36502805 36502994 -48935486 + AluSq SINE Alu 1 191 -122 1711 101 0 0 chr17 36502996 36503224 -48935256 - AluSc SINE Alu -81 228 1 2108 122 3 0 chr17 36503226 36503521 -48934959 - AluSx SINE Alu -15 297 2 1678 126 43 47 chr17 36503579 36503880 -48934600 + AluSx SINE Alu 2 301 -11 2057 127 10 0 chr17 36503966 36504265 -48934215 + AluSx SINE Alu 1 302 -10 557 100 110 70 chr17 36505026 36505042 -48933438 + U6 snRNA snRNA 1 15 -92 306 0 0 0 chr17 36505042 36505076 -48933404 + (CA)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr17 36505075 36505099 -48933381 + (TA)n Simple_repeat Simple_repeat 2 25 0 * 557 100 110 70 chr17 36505076 36505099 -48933381 + U6 snRNA snRNA 15 36 -71 2262 64 3 14 chr17 36505099 36505395 -48933085 - AluY SINE Alu -18 293 1 557 100 110 70 chr17 36505395 36505477 -48933003 + U6 snRNA snRNA 36 104 -3 1553 146 112 8 chr17 36505488 36505755 -48932725 + AluJo SINE Alu 1 295 -7 279 232 121 30 chr17 36505938 36506037 -48932443 - MIR3 SINE MIR -8 200 93 2177 122 0 0 chr17 36506259 36506571 -48931909 - AluSx SINE Alu 0 312 1 2221 110 0 0 chr17 36506980 36507279 -48931201 + AluSx SINE Alu 1 299 -13 210 242 129 0 chr17 36508358 36508420 -48930060 - L2 LINE L2 0 3313 3244 217 259 0 0 chr17 36508427 36508481 -48929999 + L2 LINE L2 3213 3266 -6 694 13 0 0 chr17 36508904 36508981 -48929499 + tRNA-Asn-AAC tRNA tRNA 1 77 0 191 53 0 79 chr17 36508986 36509024 -48929456 + (T)n Simple_repeat Simple_repeat 1 35 0 184 214 143 122 chr17 36510144 36510242 -48928238 + L2 LINE L2 3146 3245 -27 223 68 0 45 chr17 36512368 36512412 -48926068 + (TCCCC)n Simple_repeat Simple_repeat 2 43 0 223 89 0 44 chr17 36512492 36512537 -48925943 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 27 62 0 0 chr17 36513147 36513195 -48925285 + GC_rich Low_complexity Low_complexity 1 48 0 465 211 108 72 chr17 36515104 36515226 -48923254 + MIR3 SINE MIR 23 154 -54 1944 128 7 13 chr17 36515226 36515402 -48923078 - AluSg1 SINE Alu -6 303 128 2226 81 0 7 chr17 36515402 36515698 -48922782 - AluSc SINE Alu -5 304 11 1944 128 7 13 chr17 36515698 36515826 -48922654 - AluSg1 SINE Alu -181 128 1 465 211 108 72 chr17 36515826 36515869 -48922611 + MIR3 SINE MIR 154 194 -14 2262 110 0 0 chr17 36516105 36516415 -48922065 + AluSx SINE Alu 3 312 0 1834 131 27 20 chr17 36517368 36517666 -48920814 + AluSx SINE Alu 1 300 -12 888 150 0 96 chr17 36519466 36519653 -48918827 - AluJb SINE Alu -8 304 136 2371 82 0 0 chr17 36519978 36520281 -48918199 - AluY SINE Alu -8 303 1 285 246 297 22 chr17 36522747 36522825 -48915655 - MER5A DNA MER1_type -6 183 128 2351 76 3 3 chr17 36522825 36523128 -48915352 - AluSg SINE Alu -7 303 1 285 246 297 22 chr17 36523128 36523187 -48915293 - MER5A DNA MER1_type -61 128 8 324 156 0 248 chr17 36523229 36523282 -48915198 + MER5B DNA MER1_type 70 134 -44 1821 159 27 0 chr17 36523282 36523578 -48914902 - AluSq SINE Alu -9 304 1 324 156 0 248 chr17 36523578 36523591 -48914889 + MER5B DNA MER1_type 134 148 -30 1709 116 89 20 chr17 36523591 36523884 -48914596 - AluSp SINE Alu 0 313 1 324 156 0 248 chr17 36523884 36523896 -48914584 + MER5B DNA MER1_type 148 161 -17 2515 58 0 0 chr17 36523896 36524206 -48914274 - AluY SINE Alu -1 310 1 324 156 0 248 chr17 36524206 36524266 -48914214 + MER5B DNA MER1_type 161 175 -3 26 0 0 0 chr17 36525656 36525682 -48912798 + AT_rich Low_complexity Low_complexity 1 26 0 223 250 19 0 chr17 36527563 36527615 -48910865 + MIR SINE MIR 3 55 -207 291 28 0 0 chr17 36527784 36527820 -48910660 + (TG)n Simple_repeat Simple_repeat 2 37 0 182 308 266 7 chr17 36527910 36528053 -48910427 + L3 LINE CR1 1295 1474 -103 210 188 213 75 chr17 36528054 36528115 -48910365 - MIR SINE MIR -79 129 53 1427 151 38 38 chr17 36528115 36528406 -48910074 - AluJb SINE Alu -21 291 1 210 188 213 75 chr17 36528406 36528424 -48910056 - MIR SINE MIR -155 53 39 1010 74 0 0 chr17 36528838 36528959 -48909521 + 5S rRNA rRNA 1 121 0 237 181 56 14 chr17 36530273 36530345 -48908135 + (CTGGGG)n Simple_repeat Simple_repeat 1 75 0 213 243 18 36 chr17 36530369 36530480 -48908000 + (CCCG)n Simple_repeat Simple_repeat 3 111 0 2232 92 27 0 chr17 36532943 36533238 -48905242 - AluSx SINE Alu -9 303 1 220 208 0 0 chr17 36533610 36533663 -48904817 + A-rich Low_complexity Low_complexity 2 54 0 411 83 0 0 chr17 36534352 36534412 -48904068 + (CA)n Simple_repeat Simple_repeat 2 61 0 219 88 0 0 chr17 36535868 36535902 -48902578 + (CTG)n Simple_repeat Simple_repeat 3 36 0 216 0 0 0 chr17 36536476 36536500 -48901980 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1380 93 6 0 chr17 36536502 36536685 -48901795 - AluSg/x SINE Alu -29 281 98 300 345 90 28 chr17 36536692 36536717 -48901763 - L1MC4a LINE L1 -1550 6258 6236 2396 80 0 0 chr17 36536717 36537016 -48901464 + AluSq SINE Alu 2 300 -13 300 345 90 28 chr17 36537016 36537167 -48901313 - L1MC4a LINE L1 -1572 6236 6071 1801 144 36 13 chr17 36537233 36537538 -48900942 - AluJb SINE Alu 0 312 1 210 250 0 68 chr17 36538738 36538826 -48899654 + G-rich Low_complexity Low_complexity 5 86 0 264 277 27 54 chr17 36539173 36539285 -48899195 - MIR SINE MIR -104 158 50 * 568 326 79 9 chr17 36539244 36539471 -48899009 + MIR SINE MIR 20 262 0 253 246 31 0 chr17 36539482 36539547 -48898933 - MIR SINE MIR -110 98 32 377 291 198 17 chr17 36539642 36539879 -48898601 + L2 LINE L2 3032 3311 -2 223 203 0 34 chr17 36540411 36540470 -48898010 + G-rich Low_complexity Low_complexity 3 59 0 285 278 165 9 chr17 36542095 36542210 -48896270 + MIR SINE MIR 18 150 -58 314 152 35 44 chr17 36542277 36542370 -48896110 - 7SLRNA srpRNA srpRNA -6 314 252 2427 64 0 0 chr17 36542370 36542666 -48895814 - AluSq SINE Alu -17 296 1 314 152 35 44 chr17 36542666 36542687 -48895793 - 7SLRNA srpRNA srpRNA -68 252 232 294 269 90 64 chr17 36544468 36544712 -48893768 + MIR SINE MIR 20 258 -4 264 100 0 0 chr17 36544953 36544993 -48893487 + (GGA)n Simple_repeat Simple_repeat 2 41 0 270 372 71 10 chr17 36545602 36545798 -48892682 + L2 LINE L2 2871 3078 -194 2290 92 0 16 chr17 36545989 36546303 -48892177 - AluSq SINE Alu -4 309 1 730 236 28 6 chr17 36546477 36546655 -48891825 + MIR SINE MIR 16 197 -65 205 333 71 42 chr17 36549084 36549252 -48889228 - MIR3 SINE MIR -27 181 9 255 274 73 61 chr17 36549527 36549691 -48888789 + L2 LINE L2 1814 1979 -1335 735 197 0 8 chr17 36549921 36550053 -48888427 + MER94 DNA DNA 4 134 0 234 312 50 78 chr17 36550068 36550350 -48888130 + L2 LINE L2 2470 2743 -571 531 278 41 46 chr17 36550694 36550888 -48887592 + MIR SINE MIR 70 262 0 315 359 73 9 chr17 36550898 36551118 -48887362 + L2 LINE L2 3005 3238 -34 203 236 255 19 chr17 36551586 36551689 -48886791 + L2 LINE L2 3006 3083 -189 1023 208 19 33 chr17 36551689 36551834 -48886646 + MER3 DNA MER1_type 1 144 -65 2087 113 7 10 chr17 36551834 36552144 -48886336 - AluSx SINE Alu -3 309 1 1023 208 19 33 chr17 36552144 36552210 -48886270 + MER3 DNA MER1_type 144 209 0 203 236 255 19 chr17 36552210 36552263 -48886217 + L2 LINE L2 3083 3199 -73 644 288 120 54 chr17 36552274 36552642 -48885838 + L2 LINE L2 2922 3313 0 377 256 44 15 chr17 36553368 36553505 -48884975 + L1MC5 LINE L1 7785 7925 -36 47 33 0 0 chr17 36554946 36555007 -48883473 + GC_rich Low_complexity Low_complexity 1 61 0 230 111 0 79 chr17 36555145 36555208 -48883272 + (CGGGGG)n Simple_repeat Simple_repeat 3 60 0 286 172 0 23 chr17 36555224 36555311 -48883169 + CT-rich Low_complexity Low_complexity 2 86 0 341 189 39 31 chr17 36555496 36555623 -48882857 + (CCCG)n Simple_repeat Simple_repeat 3 130 0 363 292 153 14 chr17 36556010 36556154 -48882326 - L2 LINE L2 0 3272 3109 21 0 0 0 chr17 36556775 36556796 -48881684 + GC_rich Low_complexity Low_complexity 1 21 0 490 320 13 7 chr17 36557539 36557692 -48880788 - MIR SINE MIR -66 196 43 375 274 124 20 chr17 36558024 36558177 -48880303 + MIR SINE MIR 77 245 -17 24 53 0 0 chr17 36558369 36558407 -48880073 + GC_rich Low_complexity Low_complexity 1 38 0 397 247 110 32 chr17 36558857 36559011 -48879469 + MIR SINE MIR 22 187 -75 375 253 88 7 chr17 36559566 36559710 -48878770 + MIR3 SINE MIR 39 208 0 2274 93 3 0 chr17 36559803 36560113 -48878367 - AluY SINE Alu 0 311 1 263 305 53 63 chr17 36560179 36560532 -48877948 - L2 LINE L2 0 3272 2924 2165 94 10 7 chr17 36560532 36560830 -48877650 + AluSg1 SINE Alu 1 299 -10 1219 91 0 18 chr17 36560830 36560995 -48877485 + AluSg/x SINE Alu 134 295 -17 262 333 167 0 chr17 36561237 36561477 -48877003 - L2 LINE L2 -1222 2092 1813 339 278 139 0 chr17 36561617 36561732 -48876748 - MIR SINE MIR 0 262 132 310 270 214 0 chr17 36561737 36561863 -48876617 + MIR3 SINE MIR 55 207 -1 2358 67 7 0 chr17 36561930 36562228 -48876252 - AluSp SINE Alu -13 300 1 959 114 0 0 chr17 36562249 36562380 -48876100 - AluSg SINE Alu -179 131 1 470 209 47 0 chr17 36562382 36562468 -48876012 - AluJ/FLAM SINE Alu -222 90 1 240 369 45 19 chr17 36562611 36562768 -48875712 - L2 LINE L2 0 3313 3153 376 218 127 9 chr17 36563033 36563143 -48875337 + L2 LINE L2 3191 3313 0 204 232 256 24 chr17 36563238 36563363 -48875117 - L2 LINE L2 -843 2471 2318 332 345 29 24 chr17 36563486 36563692 -48874788 - L2 LINE L2 -1067 2247 2041 392 66 0 16 chr17 36564015 36564076 -48874404 + (TG)n Simple_repeat Simple_repeat 2 61 0 2396 84 0 3 chr17 36564128 36564439 -48874041 + AluSg SINE Alu 1 310 0 1992 112 21 14 chr17 36564834 36565121 -48873359 - AluSg SINE Alu -21 289 1 2027 137 0 0 chr17 36565138 36565430 -48873050 + AluSx SINE Alu 1 292 -20 1602 171 0 4 chr17 36565458 36565715 -48872765 + AluJb SINE Alu 34 289 -23 2235 122 0 0 chr17 36565750 36566062 -48872418 + AluSq SINE Alu 1 312 -1 926 220 43 56 chr17 36566066 36566370 -48872110 - L1ME2 LINE L1 -9 6155 5856 1648 230 120 29 chr17 36567171 36567552 -48870928 + L2 LINE L2 2366 2808 -506 2187 117 7 0 chr17 36567552 36567859 -48870621 + AluSx SINE Alu 3 311 -1 1648 230 120 29 chr17 36567859 36567994 -48870486 + L2 LINE L2 2808 2929 -385 1874 149 3 3 chr17 36568050 36568338 -48870142 - AluJb SINE Alu -23 289 2 605 227 76 91 chr17 36568340 36568367 -48870113 + L2 LINE L2 3053 3079 -234 1931 110 48 7 chr17 36568367 36568664 -48869816 + AluSq SINE Alu 1 308 0 605 227 76 91 chr17 36568664 36568899 -48869581 + L2 LINE L2 3079 3312 -1 189 291 63 70 chr17 36570418 36570498 -48867982 + MIR SINE MIR 65 145 -117 2176 110 7 3 chr17 36570498 36570806 -48867674 - AluSx SINE Alu -3 309 1 189 291 63 70 chr17 36570806 36570883 -48867597 + MIR SINE MIR 145 221 -41 439 266 108 37 chr17 36570966 36571207 -48867273 + L1MC5 LINE L1 7311 7568 -393 1352 171 145 15 chr17 36571209 36571330 -48867150 + AluJo SINE Alu 1 105 -207 234 0 0 0 chr17 36571330 36571356 -48867124 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1052 9 0 0 chr17 36571356 36571472 -48867008 + L1PA5 LINE L1 6027 6170 0 232 36 0 0 chr17 36571472 36571500 -48866980 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 497 216 14 58 chr17 36571502 36571641 -48866839 + FLAM_A SINE Alu 1 133 0 439 273 0 35 chr17 36571645 36571788 -48866692 + L1MC5 LINE L1 7559 7696 -265 210 236 0 0 chr17 36571779 36571834 -48866646 + (TATATG)n Simple_repeat Simple_repeat 5 59 0 * 1967 126 21 0 chr17 36571834 36572120 -48866360 - AluSx SINE Alu -20 292 1 886 207 0 0 chr17 36572209 36572373 -48866107 + FRAM SINE Alu 1 164 -2 2410 87 0 10 chr17 36572382 36572681 -48865799 + AluY SINE Alu 1 296 -15 2308 119 0 0 chr17 36572833 36573135 -48865345 - AluSx SINE Alu -10 302 1 269 310 50 20 chr17 36573207 36573407 -48865073 - L2 LINE L2 -211 3061 2856 2316 113 0 0 chr17 36573497 36573798 -48864682 + AluSx SINE Alu 1 301 -11 429 189 0 0 chr17 36573862 36573936 -48864544 - FLAM_A SINE Alu -57 85 12 1507 129 0 52 chr17 36573943 36573989 -48864491 + AluJb SINE Alu 80 127 -185 2323 86 7 0 chr17 36573989 36574281 -48864199 - AluSp SINE Alu -19 294 1 1507 129 0 52 chr17 36574281 36574466 -48864014 + AluJb SINE Alu 127 299 -13 636 317 144 16 chr17 36574561 36575261 -48863219 - L2 LINE L2 -841 2473 1684 2053 126 3 28 chr17 36575478 36575796 -48862684 - AluSx SINE Alu -2 310 1 297 283 43 0 chr17 36575969 36576061 -48862419 + L2 LINE L2 3177 3272 0 2346 102 3 0 chr17 36576252 36576557 -48861923 - AluSx SINE Alu -6 306 1 1903 158 0 20 chr17 36576584 36576882 -48861598 - AluJo SINE Alu -15 297 6 410 217 70 43 chr17 36576929 36577044 -48861436 + L2 LINE L2 3160 3277 -36 292 114 129 14 chr17 36577044 36577114 -48861366 - MER53 DNA DNA 0 189 112 2053 109 6 59 chr17 36577140 36577462 -48861018 - AluSq SINE Alu -8 305 1 921 179 62 110 chr17 36577531 36577818 -48860662 + L1MC5 LINE L1 7381 7643 -318 2169 137 0 13 chr17 36577818 36578124 -48860356 - AluSx SINE Alu -10 302 1 921 179 62 110 chr17 36578124 36578254 -48860226 + L1MC5 LINE L1 7643 7778 -183 1903 164 23 3 chr17 36578270 36578575 -48859905 + AluJb SINE Alu 1 311 -1 2232 124 0 19 chr17 36578607 36578921 -48859559 - AluSx SINE Alu -4 308 1 2394 52 42 3 chr17 36578939 36579228 -48859252 - AluY SINE Alu -11 300 1 405 205 67 5 chr17 36579228 36579341 -48859139 + L1ME2 LINE L1 6053 6155 -9 1391 186 46 11 chr17 36579342 36579622 -48858858 - AluJb SINE Alu -12 300 11 440 224 48 16 chr17 36579653 36579778 -48858702 + L1MC5 LINE L1 7785 7913 -48 419 323 8 8 chr17 36579816 36579949 -48858531 - MIR SINE MIR -114 148 16 498 227 70 0 chr17 36580115 36580243 -48858237 + MIR SINE MIR 7 143 -119 2088 112 6 38 chr17 36580244 36580417 -48858063 - AluSx SINE Alu -9 303 126 279 0 0 0 chr17 36580417 36580448 -48858032 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 2126 112 4 0 chr17 36580449 36580726 -48857754 - AluSc SINE Alu -31 278 1 2088 112 6 38 chr17 36580726 36580863 -48857617 - AluSx SINE Alu -185 127 1 1905 188 72 53 chr17 36580874 36580925 -48857555 + L1MB7 LINE L1 5536 5585 -599 1845 162 26 7 chr17 36580925 36581227 -48857253 - AluJb SINE Alu -4 308 1 1905 188 72 53 chr17 36581227 36581254 -48857226 + L1MB7 LINE L1 5585 5610 -574 1870 148 6 19 chr17 36581254 36581565 -48856915 + AluJo SINE Alu 1 307 -5 1905 188 72 53 chr17 36581565 36581781 -48856699 + L1MB7 LINE L1 5610 5820 -364 2376 91 3 0 chr17 36581781 36582078 -48856402 + AluSp SINE Alu 1 298 -15 1905 188 72 53 chr17 36582078 36582309 -48856171 + L1MB7 LINE L1 5820 6073 -111 2265 87 35 0 chr17 36582309 36582596 -48855884 + AluSx SINE Alu 1 297 -15 1040 149 13 0 chr17 36582597 36582751 -48855729 + AluY SINE Alu 133 288 -23 411 150 68 2 chr17 36582758 36582857 -48855623 + L1MB8 LINE L1 6062 6174 0 2386 79 0 3 chr17 36582864 36583154 -48855326 + AluSc SINE Alu 1 289 -20 206 229 186 0 chr17 36583157 36583227 -48855253 + MIR SINE MIR 159 241 -21 392 262 58 0 chr17 36583600 36583703 -48854777 - MIR SINE MIR -74 188 80 414 0 0 0 chr17 36584151 36584197 -48854283 + (TG)n Simple_repeat Simple_repeat 2 47 0 576 265 73 18 chr17 36584732 36584951 -48853529 - L2 LINE L2 0 3313 3083 205 179 107 0 chr17 36585288 36585344 -48853136 - L2 LINE L2 0 3313 3252 23 101 0 0 chr17 36585861 36585940 -48852540 + GC_rich Low_complexity Low_complexity 1 79 0 24 32 0 0 chr17 36586110 36586141 -48852339 + GC_rich Low_complexity Low_complexity 1 31 0 186 43 0 0 chr17 36589081 36589104 -48849376 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 723 225 175 81 chr17 36589709 36589775 -48848705 - MLT1D LTR MaLR -4 501 443 2300 94 0 7 chr17 36589775 36590072 -48848408 + AluSc SINE Alu 1 295 -14 723 225 175 81 chr17 36590072 36590463 -48848017 - MLT1D LTR MaLR -62 443 1 1639 146 6 73 chr17 36592374 36592690 -48845790 + AluJo SINE Alu 6 300 -12 252 286 66 11 chr17 36592819 36592910 -48845570 + L2 LINE L2 3214 3309 -4 438 219 112 9 chr17 36593197 36593346 -48845134 - MIR SINE MIR -50 212 38 451 238 50 56 chr17 36593366 36593468 -48845012 - MIR SINE MIR -1 261 158 2209 109 0 3 chr17 36593468 36593803 -48844677 - AluSx SINE Alu 0 334 1 451 238 50 56 chr17 36593803 36593859 -48844621 - MIR SINE MIR -104 158 103 193 171 49 0 chr17 36594136 36594177 -48844303 + MIR SINE MIR 109 151 -57 1773 178 3 16 chr17 36594224 36594390 -48844090 - AluJb SINE Alu -12 300 133 2414 98 0 0 chr17 36594390 36594696 -48843784 - AluSg SINE Alu -4 306 1 2106 95 21 32 chr17 36594698 36594983 -48843497 - AluSx SINE Alu -16 296 15 1773 178 3 16 chr17 36594983 36595117 -48843363 - AluJb SINE Alu -180 132 1 1353 261 66 5 chr17 36595164 36595590 -48842890 - L1ME3 LINE L1 -17 6145 5694 2332 117 0 0 chr17 36595590 36595898 -48842582 - AluSx SINE Alu -4 308 1 1353 261 66 5 chr17 36595898 36595914 -48842566 - L1ME3 LINE L1 -468 5694 5680 192 381 46 53 chr17 36595935 36596216 -48842264 - L2 LINE L2 -16 3256 2978 218 232 73 0 chr17 36596576 36596658 -48841822 - L2 LINE L2 -786 2528 2441 1768 149 13 48 chr17 36596822 36597131 -48841349 + AluJb SINE Alu 8 305 -7 241 210 0 48 chr17 36597142 36597204 -48841276 + GA-rich Low_complexity Low_complexity 1 59 0 542 287 88 27 chr17 36597234 36597646 -48840834 + MLT1J LTR MaLR 21 499 -12 22 35 0 0 chr17 36597741 36597770 -48840710 + AT_rich Low_complexity Low_complexity 1 29 0 2062 125 7 3 chr17 36597872 36598167 -48840313 + AluJb SINE Alu 1 296 -16 231 218 0 0 chr17 36598515 36598570 -48839910 + (CA)n Simple_repeat Simple_repeat 1 55 0 2321 113 3 6 chr17 36598592 36598903 -48839577 + AluSx SINE Alu 1 310 -2 1823 187 3 0 chr17 36598907 36599212 -48839268 + AluJb SINE Alu 1 306 -6 1220 158 0 0 chr17 36599219 36599402 -48839078 + FRAM SINE Alu 1 175 -1 2048 89 19 0 chr17 36599402 36599661 -48838819 + AluSg SINE Alu 33 296 -14 2090 105 46 0 chr17 36599661 36599946 -48838534 + AluSx SINE Alu 1 298 -14 1675 173 0 30 chr17 36600582 36600701 -48837779 + AluJo SINE Alu 1 122 -190 2645 44 0 0 chr17 36600701 36600997 -48837483 - AluY SINE Alu -15 296 1 1675 173 0 30 chr17 36600997 36601178 -48837302 + AluJo SINE Alu 122 292 -20 403 263 196 15 chr17 36602527 36602660 -48835820 + MER5A DNA MER1_type 27 183 -6 2178 87 3 17 chr17 36603763 36604050 -48834430 - AluSx SINE Alu -6 306 24 2328 57 35 3 chr17 36604074 36604357 -48834123 - AluY SINE Alu -6 305 14 2166 118 31 0 chr17 36604357 36604644 -48833836 - AluSx SINE Alu -14 298 3 1626 123 30 105 chr17 36605082 36605414 -48833066 - AluYb8 SINE Alu -7 311 5 1114 154 51 28 chr17 36606728 36606942 -48831538 + MER20 DNA MER1_type 1 219 0 203 377 87 14 chr17 36606969 36607107 -48831373 + L2 LINE L2 3163 3310 -3 2263 128 0 0 chr17 36607390 36607694 -48830786 + AluSq SINE Alu 1 304 -9 1219 142 0 0 chr17 36607695 36607871 -48830609 + AluSg/x SINE Alu 135 310 0 602 259 40 81 chr17 36608087 36608166 -48830314 + MIR SINE MIR 14 95 -167 2460 58 7 10 chr17 36608166 36608460 -48830020 - AluY SINE Alu -18 293 1 602 259 40 81 chr17 36608460 36608627 -48829853 + MIR SINE MIR 95 250 -12 311 133 0 0 chr17 36608640 36608729 -48829751 - Alu SINE Alu 0 328 240 1555 172 20 40 chr17 36608804 36609100 -48829380 - AluJo SINE Alu -20 292 3 1391 144 0 47 chr17 36609137 36609373 -48829107 + AluJb SINE Alu 85 309 -3 2562 239 35 29 chr17 36609420 36609746 -48828734 + L1MEc LINE L1 38 361 -6035 2345 94 3 3 chr17 36609746 36610045 -48828435 + AluSq SINE Alu 1 299 -14 2562 239 35 29 chr17 36610045 36610437 -48828043 + L1MEc LINE L1 361 760 -5636 1917 143 21 3 chr17 36610441 36610728 -48827752 + AluSg SINE Alu 1 292 -18 216 0 0 0 chr17 36610729 36610753 -48827727 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 2208 134 0 0 chr17 36610755 36611061 -48827419 + AluSx SINE Alu 1 306 -6 1988 145 0 0 chr17 36611062 36611370 -48827110 + AluSx SINE Alu 1 308 0 503 231 62 78 chr17 36611439 36611582 -48826898 + L1MEc LINE L1 2215 2359 -4037 1577 182 61 10 chr17 36611582 36611879 -48826601 + AluJb SINE Alu 1 312 0 503 231 62 78 chr17 36611879 36611950 -48826530 + L1MEc LINE L1 2359 2427 -3969 2440 77 3 3 chr17 36611950 36612248 -48826232 + AluSp SINE Alu 1 298 -15 503 231 62 78 chr17 36612248 36612274 -48826206 + L1MEc LINE L1 2427 2452 -3944 284 262 56 9 chr17 36612318 36612425 -48826055 - L1ME3 LINE L1 -8 6154 6043 2213 108 0 3 chr17 36612425 36612711 -48825769 - AluSx SINE Alu -12 300 16 903 154 0 0 chr17 36612721 36612857 -48825623 - AluSq/x SINE Alu -175 137 2 1448 144 0 0 chr17 36612954 36613155 -48825325 - AluSg/x SINE Alu -38 274 74 282 125 0 0 chr17 36613155 36613195 -48825285 - Alu SINE Alu -268 40 1 618 150 4 33 chr17 36613225 36613360 -48825120 - L1ME3A LINE L1 -206 5968 5834 1348 163 88 46 chr17 36613360 36613643 -48824837 - AluJb SINE Alu -17 295 1 812 169 0 0 chr17 36613645 36613781 -48824699 - FLAM_C SINE Alu -5 138 3 1134 284 76 23 chr17 36613785 36614727 -48823753 - L1ME3A LINE L1 -351 5815 4776 2210 106 7 10 chr17 36614731 36615033 -48823447 - AluSx SINE Alu -11 301 1 885 226 72 16 chr17 36615040 36615080 -48823400 - L1ME3A LINE L1 -1868 4278 4242 2386 80 3 7 chr17 36615080 36615382 -48823098 - AluY SINE Alu -10 301 1 885 226 72 16 chr17 36615382 36615623 -48822857 - L1ME3A LINE L1 -1904 4242 3982 3777 212 95 50 chr17 36615663 36616105 -48822375 - L1ME2 LINE L1 0 6233 5812 2131 125 3 0 chr17 36616105 36616408 -48822072 + AluSx SINE Alu 3 306 -6 3777 212 95 50 chr17 36616408 36616707 -48821773 - L1ME2 LINE L1 -421 5812 5528 2252 68 47 0 chr17 36616707 36616985 -48821495 - AluSx SINE Alu -21 291 1 3777 212 95 50 chr17 36616985 36617039 -48821441 - L1ME2 LINE L1 -705 5528 5478 1963 147 3 10 chr17 36617039 36617331 -48821149 - AluJb SINE Alu -22 290 1 3777 212 95 50 chr17 36617331 36617839 -48820641 - L1ME2 LINE L1 -755 5478 4994 2561 71 3 0 chr17 36617839 36618147 -48820333 - AluY SINE Alu -2 309 1 3777 212 95 50 chr17 36618147 36619103 -48819377 - L1ME2 LINE L1 -1239 4994 3842 854 150 0 0 chr17 36619115 36619248 -48819232 + AluJo/FLAM SINE Alu 1 133 -169 1418 191 4 12 chr17 36619251 36619507 -48818973 + AluJo SINE Alu 46 299 -13 2349 91 3 3 chr17 36619576 36619872 -48818608 - AluSp SINE Alu -17 296 1 2276 123 3 0 chr17 36619878 36620187 -48818293 - AluSx SINE Alu -2 310 1 997 261 30 65 chr17 36620189 36620439 -48818041 - L1ME2 LINE L1 -2390 3825 3568 2209 103 7 0 chr17 36620439 36620770 -48817710 - AluSx SINE Alu 0 333 1 997 261 30 65 chr17 36620770 36620794 -48817686 - L1ME2 LINE L1 -2647 3568 3545 2314 106 3 0 chr17 36620794 36621096 -48817384 - AluSg SINE Alu -7 303 1 997 261 30 65 chr17 36621096 36621355 -48817125 - L1ME2 LINE L1 -2670 3545 3309 2363 95 6 16 chr17 36621372 36621687 -48816793 - AluSx SINE Alu 0 312 1 2416 219 63 68 chr17 36621733 36622503 -48815977 - L1ME2 LINE L1 -2869 3346 2574 1709 171 3 16 chr17 36622503 36622818 -48815662 - AluJo SINE Alu -1 311 1 2416 219 63 68 chr17 36622818 36622938 -48815542 - L1ME2 LINE L1 -3641 2574 2459 2069 123 0 22 chr17 36622938 36623255 -48815225 - AluSx SINE Alu 0 312 3 2416 219 63 68 chr17 36623255 36623372 -48815108 - L1ME2 LINE L1 -3756 2459 2343 850 154 0 21 chr17 36623378 36623521 -48814959 - FLAM_C SINE Alu -1 142 3 655 226 41 0 chr17 36623524 36623719 -48814761 - L1ME2 LINE L1 -4001 2395 2193 974 302 128 65 chr17 36623719 36623927 -48814553 - L2 LINE L2 -605 2709 2516 2151 94 3 7 chr17 36623927 36624225 -48814255 + AluSx SINE Alu 1 297 -15 974 302 128 65 chr17 36624225 36624245 -48814235 - L2 LINE L2 -798 2516 2499 1835 102 43 139 chr17 36624245 36624618 -48813862 - MER1B DNA MER1_type 0 337 1 974 302 128 65 chr17 36624618 36625026 -48813454 - L2 LINE L2 -815 2499 2118 2309 94 0 0 chr17 36625026 36625334 -48813146 + AluSg SINE Alu 1 308 -2 974 302 128 65 chr17 36625334 36625372 -48813108 - L2 LINE L2 -1196 2118 2084 2331 86 3 3 chr17 36625372 36625685 -48812795 - AluSp SINE Alu 0 313 1 974 302 128 65 chr17 36625685 36625859 -48812621 - L2 LINE L2 -1230 2084 1804 1131 103 0 0 chr17 36625859 36626014 -48812466 + AluSg/x SINE Alu 131 285 -27 1102 191 0 0 chr17 36626014 36626208 -48812272 + L1PB3 LINE L1 5951 6144 -10 442 239 49 84 chr17 36626219 36626298 -48812182 - MLT1I LTR MaLR -240 169 96 2205 59 38 10 chr17 36626298 36626588 -48811892 - AluY SINE Alu -13 298 1 442 239 49 84 chr17 36626588 36626650 -48811830 - MLT1I LTR MaLR -313 96 33 2127 102 0 0 chr17 36626678 36626962 -48811518 - AluSg SINE Alu -26 284 1 451 378 9 22 chr17 36626984 36627206 -48811274 - L2 LINE L2 -1970 1344 1126 1967 127 3 7 chr17 36627219 36627519 -48810961 - AluSx SINE Alu -9 303 5 397 262 29 0 chr17 36627562 36627665 -48810815 + L2 LINE L2 3206 3311 -2 889 152 0 0 chr17 36627690 36627822 -48810658 + FLAM_C SINE Alu 2 133 0 1851 116 29 0 chr17 36627871 36628184 -48810296 + AluSx SINE Alu 1 321 0 336 125 0 0 chr17 36628239 36628303 -48810177 + (TG)n Simple_repeat Simple_repeat 2 65 0 471 230 0 10 chr17 36628338 36628438 -48810042 + MER44D DNA MER2_type 1 369 -240 6241 31 12 3 chr17 36628453 36629217 -48809263 - SVA Other Other 0 1386 635 1020 89 122 24 chr17 36629245 36629492 -48808988 - SVA Other Other -520 866 596 1169 48 0 34 chr17 36629520 36629729 -48808751 - SVA Other Other -520 866 665 5429 68 80 5 chr17 36629744 36630548 -48807932 - SVA Other Other -520 866 3 687 121 85 7 chr17 36630550 36630575 -48807905 + MER44D DNA MER2_type 425 447 -2044 2268 113 0 0 chr17 36630575 36630886 -48807594 - AluSx SINE Alu -1 311 1 687 121 85 7 chr17 36630886 36631001 -48807479 + MER44D DNA MER2_type 447 576 -33 2270 103 0 0 chr17 36631024 36631334 -48807146 + AluSg SINE Alu 1 310 0 1850 147 3 0 chr17 36631395 36631703 -48806777 - AluJb SINE Alu 0 309 1 1048 88 0 7 chr17 36631703 36631839 -48806641 - AluSq/x SINE Alu -178 135 1 495 270 80 6 chr17 36631850 36632013 -48806467 - MLT1K LTR MaLR -72 516 342 758 238 15 81 chr17 36632042 36632315 -48806165 - MLT1K LTR MaLR -324 264 10 403 319 40 116 chr17 36632319 36632520 -48805960 - L1MC/D LINE L1 -757 5389 5174 1567 169 63 25 chr17 36632520 36632804 -48805676 + AluJo SINE Alu 3 297 -15 403 319 40 116 chr17 36632804 36632962 -48805518 - L1MC/D LINE L1 -972 5174 5270 2194 101 0 0 chr17 36632962 36633260 -48805220 - AluSq SINE Alu -15 298 1 403 319 40 116 chr17 36633260 36633600 -48804880 - L1MC/D LINE L1 -875 5271 4906 2143 98 0 13 chr17 36633878 36634184 -48804296 + AluSx SINE Alu 11 312 0 24 0 0 0 chr17 36634184 36634208 -48804272 + AT_rich Low_complexity Low_complexity 1 24 0 431 292 127 25 chr17 36634455 36634942 -48803538 - L1MC/D LINE L1 -1459 4687 4151 798 241 79 28 chr17 36634994 36635284 -48803196 - L1ME1 LINE L1 -5 6161 5857 2276 93 0 0 chr17 36635293 36635593 -48802887 + AluSx SINE Alu 1 300 -12 1078 148 17 0 chr17 36635593 36635769 -48802711 + AluSg/x SINE Alu 132 310 0 884 172 91 60 chr17 36635786 36636010 -48802470 - L1ME1 LINE L1 -773 5586 5370 1604 149 44 37 chr17 36636010 36636175 -48802305 - AluJb SINE Alu -14 298 129 2339 75 0 25 chr17 36636175 36636493 -48801987 - AluSx SINE Alu -2 310 1 1604 149 44 37 chr17 36636493 36636623 -48801857 - AluJb SINE Alu -183 129 1 884 172 91 60 chr17 36636623 36636634 -48801846 - L1ME1 LINE L1 -989 5370 5361 1852 129 26 0 chr17 36636634 36636949 -48801531 - AluSx SINE Alu 0 325 4 884 172 91 60 chr17 36636949 36637080 -48801400 - L1ME1 LINE L1 -998 5361 5203 2253 98 3 0 chr17 36637081 36637387 -48801093 - AluSx SINE Alu -5 307 1 1074 179 0 0 chr17 36637387 36637566 -48800914 - FRAM SINE Alu -3 173 1 1878 158 7 0 chr17 36637570 36637867 -48800613 - AluJb SINE Alu -12 300 2 1845 244 106 35 chr17 36637867 36638109 -48800371 - L1ME1 LINE L1 -1241 4905 4682 2140 119 3 3 chr17 36638109 36638420 -48800060 - AluSx SINE Alu -1 311 1 1845 244 106 35 chr17 36638420 36638954 -48799526 - L1ME1 LINE L1 -1464 4682 4074 2207 109 0 3 chr17 36639277 36639581 -48798899 + AluSx SINE Alu 1 303 -9 194 321 36 36 chr17 36639932 36640016 -48798464 - L2 LINE L2 -2781 533 450 335 175 0 0 chr17 36640282 36640339 -48798141 + MIR SINE MIR 90 146 -62 237 312 13 0 chr17 36641024 36641101 -48797379 + L2 LINE L2 3229 3306 -7 * 328 286 222 0 chr17 36641082 36641208 -48797272 - MIR SINE MIR -6 256 103 296 259 50 86 chr17 36641257 36641371 -48797109 + MIR3 SINE MIR 3 115 -93 1771 132 30 0 chr17 36641371 36641664 -48796816 - AluSx SINE Alu 0 309 9 296 259 50 86 chr17 36641664 36641686 -48796794 + MIR3 SINE MIR 115 136 -72 2337 87 0 0 chr17 36641831 36642140 -48796340 + AluY SINE Alu 1 309 -2 484 303 82 0 chr17 36642155 36642350 -48796130 + MIR SINE MIR 28 238 -24 210 37 0 0 chr17 36642451 36642478 -48796002 + (TC)n Simple_repeat Simple_repeat 2 28 0 1730 148 46 11 chr17 36642478 36642762 -48795718 - AluJb SINE Alu -18 294 1 188 304 98 68 chr17 36643050 36643316 -48795164 + L2 LINE L2 2820 3093 -179 379 267 114 0 chr17 36643933 36644038 -48794442 + MIR SINE MIR 28 144 -118 1160 160 0 0 chr17 36644551 36644732 -48793748 - AluJb SINE Alu 0 312 132 2000 132 13 0 chr17 36644833 36645137 -48793343 + AluSx SINE Alu 1 308 -4 1812 141 16 29 chr17 36645156 36645356 -48793124 - AluJb SINE Alu -4 308 112 2279 97 0 0 chr17 36645356 36645654 -48792826 + AluSg SINE Alu 1 298 -12 1812 141 16 29 chr17 36645654 36645765 -48792715 - AluJb SINE Alu -200 112 1 2227 105 0 22 chr17 36645782 36646097 -48792383 - AluSc SINE Alu -1 308 1 189 340 14 48 chr17 36646546 36646693 -48791787 - L2 LINE L2 -215 3057 2916 246 32 0 0 chr17 36646694 36646725 -48791755 + (TG)n Simple_repeat Simple_repeat 2 32 0 331 265 20 10 chr17 36646838 36646936 -48791544 - MER5C DNA MER1_type -1 323 225 457 133 214 0 chr17 36646959 36647057 -48791423 - MER5C DNA MER1_type -205 119 1 1846 83 0 0 chr17 36647421 36647651 -48790829 + AluSx SINE Alu 21 250 -62 1447 161 84 21 chr17 36648086 36648372 -48790108 - L1MB5 LINE L1 -10 6164 5861 741 194 0 0 chr17 36648388 36648512 -48789968 - FLAM_C SINE Alu -18 125 2 931 178 33 0 chr17 36648513 36648765 -48789715 - L1MB5 LINE L1 -311 5873 5503 221 206 0 32 chr17 36649179 36649242 -48789238 + CT-rich Low_complexity Low_complexity 4 64 0 2171 99 7 0 chr17 36649403 36649706 -48788774 - AluSx SINE Alu -6 306 2 2211 105 3 3 chr17 36649738 36650042 -48788438 - AluSq SINE Alu -9 304 1 316 118 0 0 chr17 36650298 36650349 -48788131 + AluSp/q SINE Alu 249 299 -4 2353 93 0 0 chr17 36650361 36650673 -48787807 + AluSx SINE Alu 1 312 0 417 255 21 0 chr17 36650673 36650767 -48787713 + MER5A DNA MER1_type 64 159 -30 31 0 0 0 chr17 36654606 36654637 -48783843 + GC_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr17 36654693 36654721 -48783759 + GC_rich Low_complexity Low_complexity 1 28 0 357 302 7 13 chr17 36654736 36654885 -48783595 + (CG)n Simple_repeat Simple_repeat 1 148 0 57 85 0 0 chr17 36654912 36655053 -48783427 + GC_rich Low_complexity Low_complexity 1 141 0 241 230 23 23 chr17 36655159 36655246 -48783234 + G-rich Low_complexity Low_complexity 4 90 0 291 262 8 56 chr17 36655401 36655527 -48782953 + G-rich Low_complexity Low_complexity 4 123 0 348 143 36 0 chr17 36657511 36657595 -48780885 + CT-rich Low_complexity Low_complexity 1 87 0 216 111 0 0 chr17 36658536 36658572 -48779908 + (GGGA)n Simple_repeat Simple_repeat 3 38 0 294 255 11 75 chr17 36658731 36658919 -48779561 + CT-rich Low_complexity Low_complexity 1 176 0 390 115 0 0 chr17 36659076 36659137 -48779343 + (TG)n Simple_repeat Simple_repeat 2 62 0 503 256 71 12 chr17 36659499 36659667 -48778813 + MIR3 SINE MIR 17 194 -14 253 275 12 12 chr17 36660690 36660770 -48777710 + MIR SINE MIR 175 254 -8 298 297 0 85 chr17 36661049 36661167 -48777313 + L3b LINE CR1 1276 1383 -200 420 216 133 20 chr17 36661448 36661599 -48776881 + MIR3 SINE MIR 13 181 -27 255 125 0 0 chr17 36661730 36661770 -48776710 + (CA)n Simple_repeat Simple_repeat 2 41 0 731 298 55 8 chr17 36663048 36663286 -48775194 + MIR SINE MIR 1 249 -13 237 333 0 0 chr17 36664890 36664962 -48773518 + (TG)n Simple_repeat Simple_repeat 1 72 0 231 250 0 0 chr17 36665179 36665227 -48773253 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 2207 82 0 0 chr17 36665243 36665523 -48772957 + AluSg SINE Alu 1 280 -30 306 281 37 0 chr17 36665541 36665623 -48772857 - L2 LINE L2 -15 3298 3214 585 296 63 14 chr17 36665953 36666176 -48772304 + MIR SINE MIR 22 255 -7 290 211 0 0 chr17 36666708 36666765 -48771715 - L3 LINE CR1 -103 1474 1418 465 356 28 0 chr17 36667073 36667253 -48771227 - MIR SINE MIR -2 260 76 183 193 0 158 chr17 36668040 36668097 -48770383 - L2 LINE L2 -15 3298 3251 * 606 297 68 0 chr17 36668071 36668276 -48770204 - MIR SINE MIR -31 231 14 217 371 35 0 chr17 36669245 36669361 -48769119 + L3 LINE CR1 1045 1164 -413 465 270 86 18 chr17 36669996 36670159 -48768321 + MIR SINE MIR 20 193 -69 2074 114 7 0 chr17 36670223 36670513 -48767967 + AluSx SINE Alu 1 292 -20 581 67 0 0 chr17 36671543 36671618 -48766862 + AluS SINE Alu 1 75 -238 186 167 0 0 chr17 36672663 36672699 -48765781 + CT-rich Low_complexity Low_complexity 2 37 0 247 308 15 0 chr17 36672707 36672772 -48765708 - MIR SINE MIR -72 136 71 263 302 0 0 chr17 36674235 36674298 -48764182 + MIR SINE MIR 86 148 -60 186 71 0 0 chr17 36675473 36675501 -48762979 + (TG)n Simple_repeat Simple_repeat 1 28 0 198 167 0 0 chr17 36675881 36675917 -48762563 + CT-rich Low_complexity Low_complexity 1 36 0 2423 77 3 0 chr17 36676906 36677217 -48761263 + AluSq SINE Alu 1 312 -1 192 191 26 0 chr17 36677297 36677352 -48761128 - MIR SINE MIR -57 151 97 1853 125 10 27 chr17 36677390 36677685 -48760795 + AluJb SINE Alu 7 296 -16 243 239 68 8 chr17 36679078 36679195 -48759285 + MER113 DNA MER1_type? 37 160 -361 2203 116 0 3 chr17 36679323 36679634 -48758846 - AluSg SINE Alu 0 310 1 1720 188 3 10 chr17 36679635 36679938 -48758542 + AluJo SINE Alu 12 312 0 358 302 69 0 chr17 36680168 36680284 -48758196 + MIR SINE MIR 49 172 -90 264 59 0 0 chr17 36680447 36680481 -48757999 + (TG)n Simple_repeat Simple_repeat 2 35 0 29 28 0 0 chr17 36682037 36682073 -48756407 + GC_rich Low_complexity Low_complexity 1 36 0 243 342 104 42 chr17 36683548 36683788 -48754692 - L2 LINE L2 -182 3090 2836 228 333 184 9 chr17 36684768 36684882 -48753598 + L2 LINE L2 3137 3270 -2 1742 126 41 38 chr17 36685210 36685503 -48752977 + AluJb SINE Alu 1 294 -18 22 70 0 0 chr17 36687792 36687835 -48750645 + GC_rich Low_complexity Low_complexity 1 43 0 28 29 0 0 chr17 36687899 36687934 -48750546 + GC_rich Low_complexity Low_complexity 1 35 0 180 97 0 0 chr17 36687957 36687988 -48750492 + (CGG)n Simple_repeat Simple_repeat 1 31 0 309 227 13 40 chr17 36689411 36689486 -48748994 - L2 LINE L2 0 3272 3200 239 320 170 0 chr17 36691993 36692193 -48746287 + L2 LINE L2 2827 3060 -212 622 279 39 17 chr17 36693365 36693544 -48744936 + MIR SINE MIR 2 184 -78 1142 201 201 0 chr17 36693554 36693813 -48744667 + AluJb SINE Alu 1 311 -1 699 46 0 0 chr17 36693821 36693908 -48744572 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 225 0 0 0 chr17 36693911 36693936 -48744544 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 471 239 82 14 chr17 36694027 36694195 -48744285 - MER5B DNA MER1_type -3 175 5 220 230 27 27 chr17 36694215 36694289 -48744191 - L3 LINE CR1 -117 1460 1387 188 65 0 32 chr17 36695396 36695427 -48743053 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 204 40 0 0 chr17 36696005 36696030 -48742450 + (CCCCCA)n Simple_repeat Simple_repeat 4 28 0 331 271 25 37 chr17 36696805 36697016 -48741464 + CT-rich Low_complexity Low_complexity 1 208 0 23 0 0 0 chr17 36698970 36698993 -48739487 + GC_rich Low_complexity Low_complexity 1 23 0 245 298 107 0 chr17 36699571 36699655 -48738825 + MIR3 SINE MIR 91 183 -25 192 284 222 0 chr17 36699921 36700002 -48738478 - L2 LINE L2 -35 3237 3139 433 267 78 0 chr17 36700510 36700626 -48737854 + MIR3 SINE MIR 63 187 -21 223 261 46 0 chr17 36700747 36700812 -48737668 + MIR SINE MIR 103 170 -92 334 242 81 0 chr17 36703327 36703426 -48735054 + MIR SINE MIR 32 138 -70 1023 201 11 0 chr17 36704448 36704622 -48733858 + MER45A DNA AcHobo 1 176 -2 202 306 61 20 chr17 36705086 36705184 -48733296 + MIR SINE MIR 33 134 -128 1276 239 65 11 chr17 36705219 36705591 -48732889 - MLT1J1 LTR MaLR -3 443 52 383 365 0 0 chr17 36705594 36705731 -48732749 + MIR SINE MIR 123 259 -3 2251 88 7 0 chr17 36706068 36706365 -48732115 + AluSp SINE Alu 1 299 -14 2207 90 0 26 chr17 36706740 36707050 -48731430 - AluY SINE Alu -7 304 3 2116 112 0 16 chr17 36707052 36707355 -48731125 - AluSg SINE Alu -12 298 1 1998 127 7 10 chr17 36707360 36707660 -48730820 - AluSx SINE Alu -7 305 7 252 149 0 0 chr17 36707726 36707773 -48730707 + (GAA)n Simple_repeat Simple_repeat 2 48 0 364 325 68 0 chr17 36707886 36708003 -48730477 - L2 LINE L2 0 3272 3148 2421 66 3 0 chr17 36708854 36709157 -48729323 - AluSx SINE Alu -8 304 1 466 232 125 0 chr17 36709202 36709314 -48729166 - FLAM_A SINE Alu -7 135 10 1312 103 0 0 chr17 36709330 36709504 -48728976 - AluSp SINE Alu -6 307 134 2150 97 3 3 chr17 36709504 36709803 -48728677 - AluSq SINE Alu -14 299 1 1970 146 3 0 chr17 36710731 36711026 -48727454 + AluSx SINE Alu 1 296 -16 794 253 0 12 chr17 36711034 36711200 -48727280 + AluJo SINE Alu 127 290 -22 812 161 0 0 chr17 36711231 36711355 -48727125 + FLAM_C SINE Alu 3 126 -17 447 293 33 87 chr17 36711386 36711539 -48726941 - HAL1 LINE L1 -72 2435 2275 1921 157 0 25 chr17 36711539 36711717 -48726763 - AluSx SINE Alu -1 311 130 2350 90 0 0 chr17 36711717 36712016 -48726464 - AluSp SINE Alu -12 301 3 2193 87 27 3 chr17 36712018 36712317 -48726163 - AluSx SINE Alu -6 306 1 1921 157 0 25 chr17 36712317 36712454 -48726026 - AluSx SINE Alu -183 129 1 447 293 33 87 chr17 36712454 36712724 -48725756 - HAL1 LINE L1 -232 2275 2035 303 147 55 73 chr17 36712727 36712800 -48725680 - HAL1 LINE L1 -1170 1337 1265 1592 154 18 42 chr17 36712800 36713085 -48725395 - AluJo SINE Alu -33 279 2 303 147 55 73 chr17 36713085 36713120 -48725360 - HAL1 LINE L1 -1242 1265 1231 2319 89 0 16 chr17 36713179 36713494 -48724986 - AluSx SINE Alu -2 310 1 296 338 45 32 chr17 36713762 36713919 -48724561 + L3b LINE CR1 1414 1572 -11 2455 58 0 10 chr17 36715757 36716066 -48722414 + AluY SINE Alu 1 306 -5 2138 79 7 4 chr17 36717063 36717376 -48721104 + AluY SINE Alu 1 314 0 202 279 0 44 chr17 36717542 36717610 -48720870 - L2 LINE L2 -2 3311 3247 2046 116 0 28 chr17 36717656 36717976 -48720504 + AluSq SINE Alu 1 311 -2 230 241 19 0 chr17 36718108 36718162 -48720318 - L2 LINE L2 -208 3064 3010 1450 212 72 3 chr17 36718247 36718539 -48719941 + AluJo SINE Alu 1 312 0 2198 82 6 25 chr17 36719899 36720216 -48718264 - AluSq SINE Alu -2 311 1 273 272 12 0 chr17 36720820 36720901 -48717579 - L1ME3A LINE L1 -9 6161 6080 260 282 261 7 chr17 36720910 36721052 -48717428 - MER5A DNA MER1_type -5 184 7 969 108 0 23 chr17 36721076 36721206 -48717274 + AluJo SINE Alu 1 127 -185 2124 108 3 19 chr17 36721719 36722026 -48716454 + AluSq SINE Alu 5 306 -7 2377 73 6 32 chr17 36722406 36722722 -48715758 - AluSq SINE Alu -5 308 1 990 168 12 0 chr17 36723665 36723826 -48714654 + AluJo SINE Alu 137 299 -3 1925 157 0 10 chr17 36723826 36724125 -48714355 + AluJb SINE Alu 1 296 -16 243 313 69 30 chr17 36724605 36724736 -48713744 - MIR3 SINE MIR -31 177 42 259 315 45 9 chr17 36727055 36727166 -48711314 + L2 LINE L2 3180 3294 -19 1726 157 3 31 chr17 36728351 36728638 -48709842 + AluJo SINE Alu 22 300 -12 888 223 6 6 chr17 36728639 36728805 -48709675 + AluJb SINE Alu 134 299 -13 1091 108 12 30 chr17 36729077 36729243 -48709237 - AluSc SINE Alu 0 309 147 1460 160 25 7 chr17 36729243 36729466 -48709014 - L1MB3 LINE L1 -45 6138 5908 2094 100 60 20 chr17 36729466 36729766 -48708714 + AluSp SINE Alu 1 312 -1 1460 160 25 7 chr17 36729766 36729817 -48708663 - L1MB3 LINE L1 -275 5908 5859 2249 66 0 75 chr17 36729853 36730188 -48708292 - AluY SINE Alu 0 311 2 1983 134 0 23 chr17 36730190 36730495 -48707985 - AluSg SINE Alu -12 298 1 2111 134 0 16 chr17 36730502 36730808 -48707672 - AluSx SINE Alu -5 307 7 249 200 0 0 chr17 36730888 36730938 -48707542 + GA-rich Low_complexity Low_complexity 2 51 0 216 362 32 11 chr17 36731175 36731269 -48707211 - L2 LINE L2 -29 3243 3148 2174 89 0 49 chr17 36732129 36732456 -48706024 - AluSx SINE Alu -1 311 1 420 208 139 0 chr17 36732503 36732604 -48705876 - FLAM_A SINE Alu -7 135 21 1281 92 0 78 chr17 36732631 36732813 -48705667 - AluSp SINE Alu -4 309 143 2023 160 3 10 chr17 36732813 36733119 -48705361 - AluSp SINE Alu -9 304 1 1281 92 0 78 chr17 36733119 36733142 -48705338 - AluSp SINE Alu -170 143 120 2088 126 0 31 chr17 36733226 36733544 -48704936 - AluSq SINE Alu -5 308 1 2238 110 0 25 chr17 36733564 36733882 -48704598 - AluY SINE Alu -1 310 1 1634 179 3 29 chr17 36733885 36734193 -48704287 - AluJo SINE Alu -12 300 1 2347 67 0 29 chr17 36734322 36734637 -48703843 - AluSx SINE Alu -6 306 1 1900 151 3 11 chr17 36735573 36735858 -48702622 + AluSx SINE Alu 1 283 -29 2091 114 3 29 chr17 36735877 36736185 -48702295 + AluY SINE Alu 3 302 -9 1565 130 0 0 chr17 36736661 36736877 -48701603 + AluSg/x SINE Alu 67 282 -30 734 0 12 0 chr17 36736877 36736963 -48701517 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 310 287 191 0 chr17 36787787 36787902 -48650578 - L2 LINE L2 0 3313 3177 398 286 43 81 chr17 36787914 36787983 -48650497 - MIR SINE MIR -14 248 178 2337 71 3 3 chr17 36787983 36788293 -48650187 - AluY SINE Alu -1 310 1 398 286 43 81 chr17 36788293 36788433 -48650047 - MIR SINE MIR -84 178 47 359 287 51 72 chr17 36788488 36788683 -48649797 - L2 LINE L2 -210 3062 2872 434 256 199 6 chr17 36788929 36789085 -48649395 - MER5A DNA MER1_type 0 189 4 236 300 12 38 chr17 36792683 36792763 -48645717 - MIR3 SINE MIR -25 183 106 461 100 0 0 chr17 36792847 36792907 -48645573 + FRAM/FAM SINE Alu 9 68 -108 268 247 71 12 chr17 36792939 36793024 -48645456 + MIR3 SINE MIR 116 205 -3 2121 106 10 7 chr17 36793235 36793537 -48644943 - AluSx SINE Alu -9 303 1 213 279 0 33 chr17 36794698 36794759 -48643721 - MIR SINE MIR -124 138 80 336 221 0 13 chr17 36794775 36794852 -48643628 + AluJo SINE Alu 1 76 -226 460 95 0 0 chr17 36794852 36794915 -48643565 - AluJo SINE Alu -15 297 235 894 148 49 7 chr17 36794915 36795057 -48643423 - AluJo SINE Alu -152 160 13 1228 150 52 5 chr17 36795063 36795256 -48643224 + AluJo SINE Alu 76 277 -35 194 314 181 0 chr17 36795348 36795453 -48643027 - L2 LINE L2 -182 3090 2967 2296 95 0 7 chr17 36795688 36795993 -48642487 + AluSc SINE Alu 1 303 -6 225 299 38 45 chr17 36796013 36796170 -48642310 - L2 LINE L2 -286 2986 2831 2205 91 3 7 chr17 36796351 36796647 -48641833 + AluSp SINE Alu 1 295 -18 1236 111 0 11 chr17 36796663 36796844 -48641636 + AluSq SINE Alu 120 298 -15 297 207 46 46 chr17 36797019 36797106 -48641374 + L2 LINE L2 3183 3269 -44 2195 77 13 16 chr17 36797354 36797664 -48640816 + AluSx SINE Alu 1 309 -3 242 312 83 0 chr17 36797666 36797775 -48640705 - L2 LINE L2 -15 3257 3140 191 244 0 22 chr17 36797860 36797905 -48640575 - L2 LINE L2 -90 3223 3180 818 246 56 32 chr17 36798570 36798822 -48639658 - MIR SINE MIR -3 259 2 1331 136 0 68 chr17 36798843 36799017 -48639463 - AluJo SINE Alu -7 305 150 2786 10 0 0 chr17 36799017 36799328 -48639152 - AluY SINE Alu 0 311 1 1331 136 0 68 chr17 36799328 36799388 -48639092 - AluJo SINE Alu -162 150 87 207 0 0 0 chr17 36799388 36799411 -48639069 + (T)n Simple_repeat Simple_repeat 1 23 0 1518 149 0 13 chr17 36799425 36799653 -48638827 - AluJo SINE Alu -85 227 3 278 242 73 89 chr17 36800816 36800940 -48637540 + MIR3 SINE MIR 9 130 -78 1626 161 30 13 chr17 36800947 36801246 -48637234 - AluJb SINE Alu -3 309 6 257 240 19 39 chr17 36802630 36802734 -48635746 + CT-rich Low_complexity Low_complexity 1 102 0 * 288 333 6 13 chr17 36802693 36802849 -48635631 + C-rich Low_complexity Low_complexity 1 155 0 201 178 278 22 chr17 36803100 36803190 -48635290 + MIR SINE MIR 34 146 -62 399 41 0 0 chr17 36803968 36804017 -48634463 + (TG)n Simple_repeat Simple_repeat 1 49 0 66 73 0 0 chr17 36804321 36804457 -48634023 + GC_rich Low_complexity Low_complexity 1 136 0 24 32 0 0 chr17 36804499 36804530 -48633950 + GC_rich Low_complexity Low_complexity 1 31 0 30 77 0 0 chr17 36804664 36804729 -48633751 + GC_rich Low_complexity Low_complexity 1 65 0 253 253 13 0 chr17 36805518 36805597 -48632883 + G-rich Low_complexity Low_complexity 5 84 0 288 232 40 40 chr17 36805871 36806022 -48632458 + (CAGAGA)n Simple_repeat Simple_repeat 6 156 0 1781 160 6 13 chr17 36806491 36806804 -48631676 - AluSx SINE Alu -1 311 1 2099 89 6 38 chr17 36807414 36807730 -48630750 - AluSq SINE Alu -7 306 1 629 258 165 0 chr17 36809107 36809289 -48629191 - MIR SINE MIR -35 227 16 203 304 38 114 chr17 36809845 36810029 -48628451 + MIR SINE MIR 20 189 -73 2219 108 0 9 chr17 36810332 36810647 -48627833 + AluSx SINE Alu 1 312 0 1139 140 0 0 chr17 36810647 36810811 -48627669 + AluSg/x SINE Alu 134 297 -15 183 319 0 0 chr17 36810811 36810858 -48627622 - L2 LINE L2 -21 3292 3246 595 229 151 21 chr17 36811683 36811875 -48626605 - MIR SINE MIR -6 256 40 21 57 0 0 chr17 36814246 36814281 -48624199 + GC_rich Low_complexity Low_complexity 1 35 0 1506 224 0 10 chr17 36814658 36814971 -48623509 - AluJb SINE Alu -2 310 1 1596 189 11 3 chr17 36814971 36815256 -48623224 - AluJo SINE Alu -15 297 11 183 42 0 0 chr17 36815641 36815665 -48622815 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 451 332 89 16 chr17 36816067 36816257 -48622223 + MIR SINE MIR 20 223 -39 1316 251 30 77 chr17 36816761 36817394 -48621086 - L1ME1 LINE L1 -310 5856 5254 779 197 0 0 chr17 36817427 36817554 -48620926 + FLAM_C SINE Alu 1 127 -16 4721 256 42 29 chr17 36817560 36819340 -48619140 - L1ME1 LINE L1 -905 5241 3438 358 309 8 40 chr17 36821007 36821133 -48617347 + MIR3 SINE MIR 72 193 -15 2213 121 0 7 chr17 36821170 36821476 -48617004 + AluSg SINE Alu 1 304 -6 4830 87 2 2 chr17 36823973 36824607 -48613873 - THE1B-int LTR MaLR -946 634 1 1979 144 18 85 chr17 36824607 36824649 -48613831 - THE1B LTR MaLR 0 364 321 207 0 0 0 chr17 36824649 36824672 -48613808 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1979 144 18 85 chr17 36824672 36825019 -48613461 - THE1B LTR MaLR -43 321 1 255 286 0 26 chr17 36825434 36825511 -48612969 - MIR3 SINE MIR -34 174 100 221 186 0 0 chr17 36826887 36826930 -48611550 - L2 LINE L2 -4 3309 3267 513 179 0 0 chr17 36827076 36827154 -48611326 - AluJ/FLAM SINE Alu -233 79 2 2203 133 10 0 chr17 36827205 36827514 -48610966 - AluSx SINE Alu 0 312 1 240 35 0 0 chr17 36827532 36827561 -48610919 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1630 197 7 0 chr17 36827563 36827842 -48610638 - AluJb SINE Alu -31 281 1 1432 159 45 98 chr17 36827848 36828210 -48610270 - L1MB7 LINE L1 -11 6173 5830 2393 205 6 28 chr17 36828210 36828707 -48609773 - MER66B LTR ERV1 0 486 1 1432 159 45 98 chr17 36828707 36828722 -48609758 - L1MB7 LINE L1 -354 5830 5816 1778 149 0 64 chr17 36828722 36829051 -48609429 - AluSx SINE Alu 0 312 5 295 202 90 11 chr17 36829404 36829493 -48608987 - MLT1J2 LTR MaLR 0 450 355 388 248 52 60 chr17 36829498 36829707 -48608773 - MLT1I LTR MaLR -140 310 71 301 312 21 0 chr17 36829751 36829844 -48608636 - MIR3 SINE MIR -110 98 4 240 319 55 11 chr17 36833394 36833485 -48604995 - L2 LINE L2 -10 3262 3168 1356 278 53 55 chr17 36834655 36834724 -48603756 - L2 LINE L2 -1 3312 3244 2135 142 0 3 chr17 36834724 36835033 -48603447 - AluSx SINE Alu -4 308 1 1356 278 53 55 chr17 36835033 36835724 -48602756 - L2 LINE L2 -69 3244 2553 197 261 0 0 chr17 36836460 36836506 -48601974 + MIR SINE MIR 161 206 -56 302 250 70 47 chr17 36836628 36836756 -48601724 - L2 LINE L2 -4 3309 3179 1832 103 0 11 chr17 36837173 36837470 -48601010 - AluY SINE Alu 0 317 24 1326 219 84 22 chr17 36837528 36837885 -48600595 - MLT1B LTR MaLR -11 379 1 269 336 69 23 chr17 36837951 36838082 -48600398 + L2 LINE L2 2956 3092 -180 2148 117 14 0 chr17 36838313 36838603 -48599877 - AluSx SINE Alu -18 294 1 209 250 0 0 chr17 36839330 36839378 -48599102 + C-rich Low_complexity Low_complexity 1 48 0 1788 113 0 79 chr17 36840568 36840860 -48597620 + AluSx SINE Alu 29 297 -15 257 288 14 0 chr17 36840861 36840934 -48597546 + MIR SINE MIR 152 225 -37 1372 195 26 15 chr17 36841734 36842006 -48596474 + AluJb SINE Alu 5 279 -33 2622 37 0 0 chr17 36842015 36842312 -48596168 - AluY SINE Alu -14 297 1 808 235 0 19 chr17 36842938 36843100 -48595380 + FRAM SINE Alu 5 163 -3 267 193 88 0 chr17 36843106 36843163 -48595317 + AluSp SINE Alu 131 192 -111 971 85 0 8 chr17 36843166 36843296 -48595184 + Tigger1 DNA MER2_type 1330 1458 -960 1872 111 0 37 chr17 36843296 36843594 -48594886 - AluSx SINE Alu -19 293 7 1690 108 127 19 chr17 36843609 36843877 -48594603 - AluSg1 SINE Alu -12 297 1 3450 102 14 10 chr17 36844020 36844522 -48593958 - L1P LINE L1 -1131 5015 4512 4791 75 7 8 chr17 36844522 36845128 -48593352 + L1PA7 LINE L1 5544 6154 0 326 252 117 18 chr17 36845129 36845240 -48593240 - L2 LINE L2 -26 3287 3166 402 283 57 98 chr17 36845317 36845758 -48592722 + L2 LINE L2 2868 3290 -23 204 67 0 0 chr17 36845811 36845841 -48592639 + (TG)n Simple_repeat Simple_repeat 1 30 0 399 350 164 15 chr17 36846004 36846413 -48592067 + L2 LINE L2 2265 2734 -580 282 293 78 66 chr17 36846461 36846628 -48591852 + L2 LINE L2 2877 3045 -227 610 235 63 99 chr17 36846826 36847047 -48591433 - MIR SINE MIR -2 260 48 2097 142 0 3 chr17 36847478 36847788 -48590692 + AluSx SINE Alu 1 309 -3 258 215 177 0 chr17 36848291 36848370 -48590110 + L2 LINE L2 3208 3300 -13 1550 143 25 45 chr17 36849198 36849484 -48588996 + AluJo SINE Alu 1 280 -32 747 279 183 54 chr17 36849776 36850449 -48588031 + L2 LINE L2 2302 3047 -266 482 259 9 9 chr17 36851077 36851193 -48587287 - MIR SINE MIR -146 116 1 473 304 113 48 chr17 36851273 36851687 -48586793 - L3 LINE CR1 -99 1478 1038 431 240 96 19 chr17 36851890 36851994 -48586486 + MIR3 SINE MIR 46 157 -51 336 268 82 42 chr17 36852059 36852224 -48586256 - MIR SINE MIR -61 201 34 452 168 11 21 chr17 36853558 36853653 -48584827 - L1M4 LINE L1 -960 5186 5093 465 67 17 0 chr17 36853656 36853716 -48584764 - AluJ/FLAM SINE Alu -250 62 2 1306 168 21 144 chr17 36853871 36853981 -48584499 - L1M4 LINE L1 -1124 5022 4900 2387 87 7 0 chr17 36853981 36854281 -48584199 - AluY SINE Alu -9 302 1 1306 168 21 144 chr17 36854281 36854594 -48583886 - L1M4 LINE L1 -1246 4900 4651 * 4255 196 41 56 chr17 36854593 36854834 -48583646 - L1M4 LINE L1 -1889 4257 4014 2069 138 0 0 chr17 36854834 36855130 -48583350 - AluJb SINE Alu -16 296 1 4255 196 41 56 chr17 36855130 36855412 -48583068 - L1M4 LINE L1 -2132 4014 3729 1876 156 0 23 chr17 36855412 36855720 -48582760 - AluSx SINE Alu -11 301 1 4255 196 41 56 chr17 36855720 36856137 -48582343 - L1M4 LINE L1 -2417 3729 3307 216 0 0 0 chr17 36856137 36856161 -48582319 + (TG)n Simple_repeat Simple_repeat 1 24 0 1945 129 7 0 chr17 36856161 36856441 -48582039 - AluSx SINE Alu -30 282 1 4255 196 41 56 chr17 36856441 36856672 -48581808 - L1M4 LINE L1 -2837 3309 3101 1787 84 0 13 chr17 36857203 36857441 -48581039 + AluSq SINE Alu 77 311 -2 446 239 153 45 chr17 36857529 36857647 -48580833 + MIR SINE MIR 49 194 -68 1937 204 49 10 chr17 36857647 36858054 -48580426 - MSTB LTR MaLR 0 426 4 446 239 153 45 chr17 36858054 36858111 -48580369 + MIR SINE MIR 194 243 -19 326 287 55 66 chr17 36858133 36858314 -48580166 - MIR SINE MIR -56 206 28 547 191 127 25 chr17 36859579 36859736 -48578744 - MIR SINE MIR -70 192 20 180 0 0 0 chr17 36860765 36860785 -48577695 + (TG)n Simple_repeat Simple_repeat 2 21 0 2941 72 23 48 chr17 36861032 36861465 -48577015 + L1PA6 LINE L1 5733 6154 0 210 71 0 0 chr17 36861867 36861895 -48576585 + (GA)n Simple_repeat Simple_repeat 1 28 0 284 263 92 0 chr17 36862194 36862270 -48576210 + L2 LINE L2 3231 3313 0 350 243 0 14 chr17 36862272 36862342 -48576138 + L2 LINE L2 3204 3272 0 2466 55 0 19 chr17 36863197 36863508 -48574972 + AluY SINE Alu 1 305 -6 24 0 0 0 chr17 36865283 36865307 -48573173 + AT_rich Low_complexity Low_complexity 1 24 0 442 253 82 41 chr17 36865996 36866166 -48572314 + MER104 DNA MER2_type 1 177 -3 625 343 48 30 chr17 36866346 36866743 -48571737 - L2 LINE L2 -420 2894 2491 366 334 45 28 chr17 36869548 36869714 -48568766 + MIR SINE MIR 8 174 -62 875 222 88 5 chr17 36869911 36870105 -48568375 - MIR SINE MIR -46 216 7 184 213 43 21 chr17 36870140 36870187 -48568293 - L2 LINE L2 -3 3310 3263 315 0 0 0 chr17 36875876 36875909 -48562571 + (CA)n Simple_repeat Simple_repeat 1 68 0 315 0 0 0 chr17 36875909 36875944 -48562536 + (CA)n Simple_repeat Simple_repeat 2 36 0 438 106 0 0 chr17 36877531 36877597 -48560883 - L1MB5 LINE L1 -6 6168 6103 279 0 0 0 chr17 36878849 36878880 -48559600 + (TG)n Simple_repeat Simple_repeat 1 31 0 26 50 0 0 chr17 36879093 36879133 -48559347 + GC_rich Low_complexity Low_complexity 1 40 0 182 105 26 0 chr17 36879207 36879245 -48559235 + (CCCCG)n Simple_repeat Simple_repeat 1 39 0 1050 146 29 6 chr17 36881441 36881612 -48556868 - AluJb SINE Alu -51 261 87 529 324 48 9 chr17 36881778 36881988 -48556492 + MIR SINE MIR 35 252 -10 2396 91 0 3 chr17 36881995 36882302 -48556178 + AluSx SINE Alu 1 306 -6 883 161 6 52 chr17 36883802 36883976 -48554504 + FRAM SINE Alu 1 166 0 2108 106 14 3 chr17 36884006 36884319 -48554161 + AluSx SINE Alu 1 316 0 180 0 0 0 chr17 36884326 36884346 -48554134 + (GA)n Simple_repeat Simple_repeat 1 20 0 1292 172 5 0 chr17 36884355 36884553 -48553927 - AluJb SINE Alu -27 285 87 370 239 238 1 chr17 36884560 36884749 -48553731 - MIR SINE MIR -11 251 20 871 168 0 14 chr17 36885337 36885480 -48553000 - AluJb SINE Alu -16 296 156 293 509 39 0 chr17 36885538 36885697 -48552783 + AluJ/monomer SINE Alu 1 36 -267 1512 99 12 129 chr17 36885740 36885822 -48552658 + Tigger1 DNA MER2_type 1512 1602 -816 2178 111 0 3 chr17 36885822 36886110 -48552370 + AluSx SINE Alu 7 293 -19 1512 99 12 129 chr17 36886110 36886360 -48552120 + Tigger1 DNA MER2_type 1602 1805 -613 681 172 0 39 chr17 36886360 36886488 -48551992 - FLAM_A SINE Alu -17 125 3 3453 130 46 28 chr17 36886491 36886786 -48551694 + Tigger1 DNA MER2_type 1798 2086 -332 2564 60 0 3 chr17 36886786 36887087 -48551393 + AluY SINE Alu 1 300 -11 3453 130 46 28 chr17 36887087 36887399 -48551081 + Tigger1 DNA MER2_type 2086 2416 -2 216 369 43 7 chr17 36887436 36887577 -48550903 + L3b LINE CR1 1298 1443 -140 213 121 0 0 chr17 36889487 36889520 -48548960 + (T)n Simple_repeat Simple_repeat 1 33 0 222 171 0 0 chr17 36889863 36889904 -48548576 + (CA)n Simple_repeat Simple_repeat 2 42 0 2165 105 7 10 chr17 36890749 36891043 -48547437 - AluSg SINE Alu -15 295 3 21 0 0 0 chr17 36891996 36892017 -48546463 + AT_rich Low_complexity Low_complexity 1 21 0 2140 119 10 16 chr17 36894396 36894708 -48543772 - AluSg SINE Alu 0 310 1 1329 196 13 27 chr17 36894976 36895277 -48543203 + AluSq SINE Alu 5 301 -12 508 331 73 25 chr17 36895473 36895829 -48542651 + L2 LINE L2 2879 3251 -62 327 291 39 19 chr17 36895885 36895988 -48542492 - L3 LINE CR1 -150 1427 1323 193 262 33 74 chr17 36896023 36896145 -48542335 - L2 LINE L2 -335 2978 2862 282 264 94 71 chr17 36896248 36896460 -48542020 - L3 LINE CR1 -259 1318 1102 2136 113 0 3 chr17 36896838 36897157 -48541323 - AluSg SINE Alu 0 318 1 315 0 0 0 chr17 36897341 36897376 -48541104 + (CA)n Simple_repeat Simple_repeat 1 35 0 195 155 119 107 chr17 36897536 36897620 -48540860 + MIR SINE MIR 70 154 -108 2270 88 41 3 chr17 36898076 36898371 -48540109 - AluSx SINE Alu -6 306 1 278 140 0 35 chr17 36898795 36898852 -48539628 + FLAM SINE Alu 57 111 -22 478 138 23 23 chr17 36898945 36899032 -48539448 + L2 LINE L2 3225 3311 -2 380 243 59 55 chr17 36899214 36899363 -48539117 - MIR SINE MIR -68 140 1 600 247 47 26 chr17 36899489 36899679 -48538801 - MLT1L LTR MaLR 0 615 422 2424 87 7 3 chr17 36899687 36899996 -48538484 - AluSg SINE Alu 0 310 1 2110 120 0 7 chr17 36899999 36900317 -48538163 - AluSg SINE Alu 0 316 1 2442 83 0 3 chr17 36900317 36900629 -48537851 - AluY SINE Alu 0 311 1 1689 161 34 7 chr17 36900629 36900920 -48537560 - AluJb SINE Alu -13 299 1 2042 116 0 20 chr17 36900931 36901234 -48537246 - AluSx SINE Alu -2 310 14 521 208 179 48 chr17 36901263 36901470 -48537010 - MLT1L LTR MaLR -341 274 41 2021 126 10 0 chr17 36902639 36903026 -48535454 + AluSp SINE Alu 1 390 0 852 249 23 34 chr17 36903036 36903301 -48535179 - AluJo SINE Alu -46 266 5 337 226 113 17 chr17 36903735 36903850 -48534630 - MER5A DNA MER1_type 0 189 64 192 135 0 0 chr17 36904362 36904399 -48534081 + (TCCCC)n Simple_repeat Simple_repeat 1 37 0 183 42 0 0 chr17 36905029 36905053 -48533427 + (T)n Simple_repeat Simple_repeat 1 24 0 211 187 0 107 chr17 36906532 36906607 -48531873 + A-rich Low_complexity Low_complexity 1 67 0 213 211 42 0 chr17 36906680 36906751 -48531729 + (TA)n Simple_repeat Simple_repeat 1 74 0 3730 123 2 5 chr17 36906911 36907470 -48531010 + THE1B-int LTR MaLR 1024 1580 0 920 179 17 12 chr17 36907470 36907643 -48530837 + THE1B LTR MaLR 1 174 -190 324 308 231 18 chr17 36907914 36908356 -48530124 + L2 LINE L2 1744 2279 -1035 416 327 77 70 chr17 36909211 36909811 -48528669 + L2 LINE L2 2670 3270 -2 180 0 0 0 chr17 36912214 36912234 -48526246 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 182 179 107 18 chr17 36912905 36912961 -48525519 + L2 LINE L2 2698 2758 -556 872 233 48 12 chr17 36913541 36913790 -48524690 - MIR SINE MIR 0 262 5 205 29 29 29 chr17 36915686 36915721 -48522759 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1498 164 29 74 chr17 36915735 36915927 -48522553 - AluJb SINE Alu -16 296 122 195 69 0 0 chr17 36915927 36915956 -48522524 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1498 164 29 74 chr17 36915956 36916073 -48522407 - AluJb SINE Alu -190 122 1 396 271 8 17 chr17 36916378 36916496 -48521984 - MIR SINE MIR -99 163 47 482 330 33 41 chr17 36916510 36916780 -48521700 - MER102b DNA MER1_type -1 340 73 185 211 0 0 chr17 36916865 36916903 -48521577 - MIR SINE MIR -224 38 1 301 308 267 0 chr17 36916932 36917127 -48521353 - L3 LINE CR1 -212 1365 1119 440 297 109 0 chr17 36918752 36918917 -48519563 + MIR3 SINE MIR 1 183 -25 236 303 63 42 chr17 36921565 36921707 -48516773 - MIR3 SINE MIR -11 197 53 332 246 203 7 chr17 36922005 36922143 -48516337 - MIR SINE MIR -63 199 35 2073 135 0 3 chr17 36924397 36924709 -48513771 - AluJb SINE Alu -1 311 1 2911 199 47 3 chr17 36925600 36926257 -48512223 - L1 LINE L1 -847 5299 4614 266 351 50 11 chr17 36926268 36926547 -48511933 - L3 LINE CR1 -118 1459 1170 337 344 8 0 chr17 36926768 36926893 -48511587 - L3 LINE CR1 -406 1171 1046 1813 152 10 13 chr17 36926919 36927228 -48511252 - AluSx SINE Alu -4 308 1 313 299 171 11 chr17 36927236 36927423 -48511057 - MIR SINE MIR -26 236 20 470 357 77 21 chr17 36927882 36928563 -48509917 + L2 LINE L2 2554 3269 -3 241 266 43 14 chr17 36928822 36928961 -48509519 - L1ME4a LINE L1 -3 6118 5976 361 255 80 21 chr17 36928966 36929154 -48509326 - L1ME4a LINE L1 -216 5905 5707 433 301 8 8 chr17 36929838 36929961 -48508519 - MER5B DNA MER1_type -52 126 4 208 95 16 0 chr17 36930152 36930191 -48508289 + MIR SINE MIR 114 152 -110 588 106 24 0 chr17 36930853 36930938 -48507542 - AluS SINE Alu -223 89 3 1890 130 18 0 chr17 36930945 36931229 -48507251 - AluSx SINE Alu -21 291 3 180 188 0 0 chr17 36931358 36931390 -48507090 - L2 LINE L2 -19 3294 3263 330 198 198 0 chr17 36931413 36931504 -48506976 - MIR SINE MIR -63 145 37 205 326 11 22 chr17 36931496 36931585 -48506895 + L2 LINE L2 3184 3271 -1 * 281 308 33 0 chr17 36932291 36932382 -48506098 + C-rich Low_complexity Low_complexity 4 97 0 1882 126 3 10 chr17 36932885 36933178 -48505302 - AluJo SINE Alu -21 291 1 551 321 106 17 chr17 36933321 36933726 -48504754 - L2 LINE L2 -2 3270 2830 189 333 111 0 chr17 36933788 36933869 -48504611 - L2 LINE L2 -710 2604 2515 260 347 25 33 chr17 36933916 36934037 -48504443 - MIR SINE MIR -82 180 61 1605 139 4 0 chr17 36934636 36934881 -48503599 - AluSx SINE Alu -66 246 1 704 168 0 60 chr17 36934881 36935030 -48503450 - AluJo SINE Alu -171 141 2 189 143 61 41 chr17 36935030 36935079 -48503401 + MIR SINE MIR 113 162 -100 380 198 37 0 chr17 36935251 36935332 -48503148 - L2 LINE L2 -13 3259 3176 284 252 221 0 chr17 36935449 36935580 -48502900 + MIR3 SINE MIR 30 189 -19 711 226 53 21 chr17 36936173 36936363 -48502117 + MIR SINE MIR 11 206 -56 194 302 95 74 chr17 36939529 36939718 -48498762 + MIR SINE MIR 67 259 -3 856 275 171 37 chr17 36940492 36940925 -48497555 - LTR33A LTR ERVL -6 517 27 223 331 54 54 chr17 36941843 36942121 -48496359 - L2 LINE L2 -493 2821 2544 236 363 67 22 chr17 36943257 36943392 -48495088 + L2 LINE L2 3125 3265 -7 719 257 21 16 chr17 36943436 36943623 -48494857 + MIR SINE MIR 61 248 -14 508 278 85 6 chr17 36944335 36944511 -48493969 - MIR SINE MIR 0 262 73 258 136 0 0 chr17 36944628 36944672 -48493808 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 213 316 0 0 chr17 36945369 36945448 -48493032 + (TG)n Simple_repeat Simple_repeat 2 80 0 1138 130 0 6 chr17 36946172 36946349 -48492131 + AluSg/x SINE Alu 131 306 -4 364 300 56 44 chr17 36946386 36946546 -48491934 - MIR SINE MIR -76 186 25 1884 128 16 16 chr17 36946650 36946955 -48491525 - AluJb SINE Alu -7 305 1 219 325 215 5 chr17 36947953 36948153 -48490327 - L2 LINE L2 -376 2938 2697 2228 85 0 13 chr17 36948166 36948473 -48490007 + AluSg SINE Alu 1 303 -7 810 178 0 14 chr17 36948483 36948629 -48489851 + FRAM SINE Alu 11 154 -22 2509 46 0 3 chr17 36948745 36949049 -48489431 + AluY SINE Alu 1 303 -8 21 0 0 0 chr17 36950646 36950667 -48487813 + GC_rich Low_complexity Low_complexity 1 21 0 243 311 175 28 chr17 36950933 36951258 -48487222 + L2 LINE L2 2449 2821 -493 286 339 182 29 chr17 36951414 36951656 -48486824 + L2 LINE L2 2992 3270 -2 226 298 48 0 chr17 36952232 36952316 -48486164 + L3 LINE CR1 1323 1410 -167 2025 95 0 18 chr17 36952397 36952712 -48485768 - AluSx SINE Alu 0 314 5 1326 172 66 90 chr17 36952884 36953261 -48485219 + MLT1A2 LTR MaLR 1 368 -6 510 234 150 6 chr17 36953368 36953535 -48484945 + MIR SINE MIR 69 259 -3 1994 129 7 7 chr17 36953757 36954059 -48484421 - AluSx SINE Alu -10 302 1 1747 139 7 13 chr17 36954402 36954705 -48483775 + AluJo SINE Alu 5 305 -7 448 257 46 33 chr17 36955409 36955561 -48482919 + MIR SINE MIR 98 251 -11 535 305 144 35 chr17 36956083 36956384 -48482096 + L2 LINE L2 1314 1581 -1732 1970 125 0 11 chr17 36956384 36956702 -48481778 - AluJb SINE Alu 0 315 1 535 305 144 35 chr17 36956702 36957049 -48481431 + L2 LINE L2 1581 3313 0 473 219 7 44 chr17 36957072 36957134 -48481346 - L1M4 LINE L1 -2472 3674 3611 2064 112 10 10 chr17 36957134 36957439 -48481041 - AluSg SINE Alu -5 305 1 473 219 7 44 chr17 36957439 36957513 -48480967 - L1M4 LINE L1 -2535 3611 3543 50 80 0 0 chr17 36957513 36957626 -48480854 + AT_rich Low_complexity Low_complexity 1 113 0 1443 222 55 20 chr17 36957626 36957865 -48480615 - L1M4 LINE L1 -2579 3567 3338 2271 94 0 0 chr17 36957865 36958172 -48480308 + AluY SINE Alu 1 307 -4 1443 222 55 20 chr17 36958172 36958383 -48480097 - L1M4 LINE L1 -2808 3338 3101 718 250 38 22 chr17 36958409 36958593 -48479887 - MIR SINE MIR -74 188 2 304 315 0 11 chr17 36960539 36960631 -48477849 + G-rich Low_complexity Low_complexity 3 93 0 352 263 134 28 chr17 36962262 36962509 -48475971 + HAL1 LINE L1 1361 1633 -874 1891 117 3 11 chr17 36962512 36962795 -48475685 - AluSx SINE Alu -13 299 19 932 197 0 0 chr17 36962985 36963163 -48475317 - FRAM SINE Alu -3 173 1 2173 125 0 0 chr17 36963286 36963591 -48474889 + AluSq SINE Alu 1 305 -8 2023 133 0 9 chr17 36963952 36964267 -48474213 + AluSx SINE Alu 1 312 0 429 277 75 6 chr17 36964304 36964463 -48474017 + MIR SINE MIR 88 257 -5 616 175 162 32 chr17 36964892 36965046 -48473434 - AluJb SINE Alu 0 312 139 480 226 93 3 chr17 36965163 36965331 -48473149 - MIR SINE MIR -23 239 52 921 210 28 6 chr17 36965350 36965531 -48472949 + MER20 DNA MER1_type 31 215 -4 260 274 0 49 chr17 36965645 36965747 -48472733 + MIR SINE MIR 33 129 -79 1595 152 57 17 chr17 36966001 36966297 -48472183 + AluJb SINE Alu 1 308 -4 582 188 39 16 chr17 36966943 36967071 -48471409 + MIR SINE MIR 21 151 -111 430 238 20 0 chr17 36968323 36968424 -48470056 - MER91A DNA MER1_type -93 103 1 946 106 0 7 chr17 36968522 36968686 -48469794 + AluSg/x SINE Alu 154 312 0 266 269 32 43 chr17 36969225 36969318 -48469162 - MIR3 SINE MIR -32 176 85 392 370 105 24 chr17 36969908 36970327 -48468153 + L1M3 LINE L1 4617 5069 -1077 2037 132 0 22 chr17 36970410 36970729 -48467751 + AluSx SINE Alu 1 312 0 2339 102 0 0 chr17 36970742 36971055 -48467425 + AluSq SINE Alu 1 313 0 372 283 47 34 chr17 36971081 36971364 -48467116 + L1M3 LINE L1 5191 5451 -729 422 178 0 0 chr17 36971388 36971461 -48467019 + AluJ/FLAM SINE Alu 5 77 -235 2032 124 11 0 chr17 36971566 36971849 -48466631 - AluSx SINE Alu -26 286 1 756 287 73 21 chr17 36971854 36972237 -48466243 + L1MC4a LINE L1 5464 5819 -302 1183 163 39 5 chr17 36972269 36972472 -48466008 - MER63A DNA MER1_type 0 210 1 753 239 64 14 chr17 36972568 36972786 -48465694 + MIR SINE MIR 2 230 -32 180 0 0 0 chr17 36972885 36972905 -48465575 + (A)n Simple_repeat Simple_repeat 1 20 0 1742 146 7 39 chr17 36972909 36973217 -48465263 + AluJo SINE Alu 7 304 -8 759 293 55 65 chr17 36973725 36974095 -48464385 + L2 LINE L2 2914 3281 -32 979 159 53 92 chr17 36974095 36974322 -48464158 + MER20 DNA MER1_type 1 218 -1 759 293 55 65 chr17 36974322 36974354 -48464126 + L2 LINE L2 3281 3312 -1 694 242 91 25 chr17 36976204 36976402 -48462078 + MER58C DNA MER1_type 5 215 0 218 260 68 68 chr17 36976408 36976554 -48461926 + L2 LINE L2 2919 3064 -208 311 250 95 60 chr17 36977099 36977267 -48461213 + MIR3 SINE MIR 27 200 -8 930 169 25 6 chr17 36977690 36977850 -48460630 - AluJo SINE Alu -18 294 132 1211 148 33 102 chr17 36977891 36978027 -48460453 + AluSx SINE Alu 21 126 -186 2521 43 0 3 chr17 36978027 36978331 -48460149 + AluY SINE Alu 1 303 -8 1211 148 33 102 chr17 36978331 36978498 -48459982 + AluSx SINE Alu 126 303 -9 749 171 0 24 chr17 36978500 36978623 -48459857 - AluJo SINE Alu -189 123 4 1910 128 0 16 chr17 36978641 36978816 -48459664 - AluSx SINE Alu -4 308 139 2430 62 0 3 chr17 36978816 36979120 -48459360 - AluY SINE Alu -8 303 1 1910 128 0 16 chr17 36979120 36979257 -48459223 - AluSx SINE Alu -173 139 1 382 364 8 0 chr17 36979257 36979389 -48459091 + L3 LINE CR1 1370 1502 -75 366 287 31 23 chr17 36980140 36980269 -48458211 + MIR SINE MIR 16 145 -117 2170 82 14 10 chr17 36980770 36981064 -48457416 + AluSc SINE Alu 1 295 -14 213 280 151 0 chr17 36981447 36981540 -48456940 - MIR SINE MIR -87 175 69 34 42 0 0 chr17 36981779 36981827 -48456653 + GC_rich Low_complexity Low_complexity 1 48 0 443 325 107 14 chr17 36982249 36982594 -48455886 + L2 LINE L2 1735 2111 -1203 574 165 116 0 chr17 36982648 36982769 -48455711 + MER20 DNA MER1_type 85 219 0 189 0 0 0 chr17 36982805 36982826 -48455654 + (TCTCC)n Simple_repeat Simple_repeat 1 21 0 1030 317 154 12 chr17 36982826 36983800 -48454680 + L2 LINE L2 2165 3272 0 234 316 61 18 chr17 36984105 36984219 -48454261 + MIR3 SINE MIR 66 184 -24 2168 118 0 9 chr17 36985273 36985588 -48452892 + AluSq SINE Alu 1 312 -1 486 294 68 6 chr17 36986025 36986188 -48452292 - MIR SINE MIR -70 192 20 2129 86 0 54 chr17 36986245 36986560 -48451920 + AluSx SINE Alu 1 298 -14 566 293 46 13 chr17 36986590 36986784 -48451696 - MIR SINE MIR -33 229 33 379 356 114 17 chr17 36986885 36987121 -48451359 + L2 LINE L2 2540 2798 -516 2335 104 0 0 chr17 36988117 36988424 -48450056 + AluSx SINE Alu 1 307 -5 441 197 0 0 chr17 36988469 36988535 -48449945 + AluJ/FLAM SINE Alu 3 68 -244 2155 94 0 10 chr17 36988535 36988832 -48449648 + AluSx SINE Alu 1 294 -18 188 284 0 75 chr17 36988992 36989059 -48449421 - L2 LINE L2 -72 3241 3180 215 274 0 0 chr17 36990488 36990539 -48447941 + L2 LINE L2 3143 3193 -79 319 324 123 20 chr17 36991220 36991464 -48447016 + L2 LINE L2 2910 3178 -94 322 276 8 0 chr17 36991504 36991766 -48446714 + GA-rich Low_complexity Low_complexity 1 264 0 189 0 0 0 chr17 36991773 36991794 -48446686 + (TGGA)n Simple_repeat Simple_repeat 3 23 0 186 209 0 0 chr17 36991890 36991933 -48446547 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 231 61 0 0 chr17 36995113 36995146 -48443334 + (TG)n Simple_repeat Simple_repeat 1 33 0 343 302 72 36 chr17 36996826 36996890 -48441590 - L2 LINE L2 -6 3266 3206 2257 105 0 7 chr17 36996890 36997194 -48441286 + AluSx SINE Alu 1 302 -10 2183 82 14 7 chr17 36997194 36997487 -48440993 + AluSg SINE Alu 1 295 -15 343 302 72 36 chr17 36997487 36997560 -48440920 - L2 LINE L2 -65 3207 3123 288 349 40 26 chr17 36999356 36999508 -48438972 - MIR3 SINE MIR -14 194 41 327 358 51 11 chr17 37000524 37000700 -48437780 - MIR3 SINE MIR -18 190 8 211 298 0 0 chr17 37001617 37001630 -48436850 - L2 LINE L2 0 3313 3301 185 65 32 0 chr17 37001630 37001661 -48436819 + (CAGTT)n Simple_repeat Simple_repeat 2 33 0 211 298 0 0 chr17 37001661 37001704 -48436776 - L2 LINE L2 -11 3302 3257 421 330 12 0 chr17 37001757 37001930 -48436550 + (CA)n Simple_repeat Simple_repeat 1 175 0 232 265 12 24 chr17 37001979 37002062 -48436418 + (CA)n Simple_repeat Simple_repeat 1 82 0 610 82 206 10 chr17 37002203 37002300 -48436180 + AluSg SINE Alu 1 116 -194 1784 83 79 4 chr17 37002300 37002552 -48435928 + AluSg SINE Alu 22 292 -18 246 370 71 49 chr17 37003308 37003532 -48434948 + L3 LINE CR1 1286 1514 -63 278 265 48 0 chr17 37004220 37004303 -48434177 - L3b LINE CR1 -174 1409 1323 437 279 102 0 chr17 37005261 37005408 -48433072 - MIR SINE MIR -55 207 46 409 238 177 30 chr17 37006676 37006862 -48431618 + MIR SINE MIR 34 251 -11 198 0 0 0 chr17 37006873 37006895 -48431585 + (CAT)n Simple_repeat Simple_repeat 3 24 0 378 335 86 10 chr17 37006913 37007122 -48431358 + MIR SINE MIR 26 250 -12 699 297 113 3 chr17 37007250 37007587 -48430893 - MLT1K LTR MaLR -9 579 206 588 270 75 11 chr17 37008126 37008300 -48430180 + MIR3 SINE MIR 21 205 -3 480 292 114 52 chr17 37008591 37008819 -48429661 - MIR SINE MIR -31 231 1 766 256 134 25 chr17 37008869 37009146 -48429334 - L2 LINE L2 -1 3312 3006 602 296 59 10 chr17 37009164 37009376 -48429104 + MIR SINE MIR 37 261 -1 241 245 43 53 chr17 37009475 37009569 -48428911 + MIR3 SINE MIR 11 103 -105 358 287 60 8 chr17 37009672 37009803 -48428677 + MIR SINE MIR 57 192 -35 478 254 99 22 chr17 37010373 37010554 -48427926 + MIR3 SINE MIR 7 201 -7 1408 278 102 24 chr17 37011516 37012266 -48426214 + L2 LINE L2 2436 3251 -62 507 303 74 6 chr17 37012428 37012590 -48425890 + MIR3 SINE MIR 31 203 -5 349 266 61 3 chr17 37012643 37012766 -48425714 + MIR SINE MIR 21 153 -63 251 247 14 14 chr17 37012980 37013053 -48425427 - L1M4 LINE L1 -1339 4807 4735 1948 145 0 7 chr17 37014326 37014630 -48423850 + AluJb SINE Alu 1 302 -10 222 318 208 5 chr17 37014737 37014929 -48423551 - L3 LINE CR1 -174 1403 1173 635 314 12 58 chr17 37015137 37015286 -48423194 + MIR SINE MIR 12 147 -115 2123 118 3 0 chr17 37015286 37015582 -48422898 + AluSx SINE Alu 2 298 -14 635 314 12 58 chr17 37015582 37015674 -48422806 + MIR SINE MIR 147 242 -20 511 318 108 40 chr17 37015763 37016087 -48422393 + L2 LINE L2 2926 3271 -1 864 331 21 7 chr17 37016100 37016384 -48422096 - L3 LINE CR1 -682 895 608 383 365 0 0 chr17 37016403 37016540 -48421940 - MIR SINE MIR -3 259 123 1276 241 62 13 chr17 37016543 37016917 -48421563 + MLT1J1 LTR MaLR 52 443 -3 228 313 50 20 chr17 37016952 37017051 -48421429 - MIR SINE MIR -128 134 33 1023 201 11 0 chr17 37017517 37017691 -48420789 - MER45A DNA AcHobo -2 176 1 1071 161 0 0 chr17 37218371 37218551 -48219929 - AluJb SINE Alu -121 191 12 23 0 0 0 chr17 37218561 37218584 -48219896 + AT_rich Low_complexity Low_complexity 1 23 0 1957 135 10 0 chr17 37218587 37218891 -48219589 - AluSq SINE Alu -6 307 1 1688 158 3 7 chr17 37218893 37219196 -48219284 - AluSp SINE Alu -10 303 2 881 128 0 0 chr17 37219200 37219333 -48219147 - FLAM_C SINE Alu 0 133 1 200 231 0 0 chr17 37219413 37219452 -48219028 - MIR SINE MIR -8 254 216 2009 123 20 0 chr17 37220724 37221026 -48217454 + AluSx SINE Alu 1 308 -4 1923 57 21 39 chr17 37221028 37221311 -48217169 + AluY SINE Alu 23 300 -11 23 62 0 0 chr17 37223117 37223149 -48215331 + GC_rich Low_complexity Low_complexity 1 32 0 244 241 0 0 chr17 37224164 37224222 -48214258 + A-rich Low_complexity Low_complexity 1 58 0 1461 194 7 33 chr17 37225021 37225325 -48213155 + AluJo SINE Alu 2 297 -5 198 103 0 0 chr17 37225325 37225354 -48213126 + (TA)n Simple_repeat Simple_repeat 2 30 0 26 0 0 0 chr17 37225359 37225385 -48213095 + AT_rich Low_complexity Low_complexity 1 26 0 401 151 0 27 chr17 37225392 37225465 -48213015 + AluS SINE Alu 2 72 -240 1662 95 3 88 chr17 37225526 37225678 -48212802 - AluSx SINE Alu -41 271 154 1964 91 18 7 chr17 37225678 37225963 -48212517 - AluSg SINE Alu -22 288 1 1662 95 3 88 chr17 37225963 37226106 -48212374 - AluSx SINE Alu -158 154 1 1692 128 6 44 chr17 37226108 37226428 -48212052 - AluSx SINE Alu -2 310 3 29 0 0 0 chr17 37226428 37226457 -48212023 + AT_rich Low_complexity Low_complexity 1 29 0 1406 148 0 47 chr17 37226535 37226852 -48211628 - AluSq SINE Alu -11 302 1 1021 256 13 4 chr17 37227307 37227541 -48210939 + MER8 DNA MER2_type 1 236 -3 1367 146 47 53 chr17 37227667 37227968 -48210512 - AluSc SINE Alu -10 299 1 277 219 31 16 chr17 37228044 37228108 -48210372 - MER81 DNA DNA 0 114 50 612 186 0 0 chr17 37228510 37228612 -48209868 + AluSg/x SINE Alu 192 293 -19 1926 101 18 4 chr17 37228619 37228896 -48209584 - AluSx SINE Alu -31 281 1 213 352 62 22 chr17 37229568 37229747 -48208733 - L2 LINE L2 -788 2526 2341 256 170 21 21 chr17 37230123 37230170 -48208310 + Alu SINE Alu 1 47 -254 406 214 0 10 chr17 37230272 37230370 -48208110 + AluSg/x SINE Alu 201 297 -13 2354 77 0 3 chr17 37230370 37230682 -48207798 + AluY SINE Alu 1 311 0 1259 97 115 52 chr17 37230863 37231151 -48207329 + AluSg SINE Alu 2 307 -3 1257 215 35 0 chr17 37231301 37231585 -48206895 + AluJo SINE Alu 1 294 -8 2000 129 3 3 chr17 37231830 37232125 -48206355 - AluSc SINE Alu -14 295 1 1200 164 30 50 chr17 37232130 37232428 -48206052 - AluJb SINE Alu -20 292 1 960 142 6 27 chr17 37232466 37232649 -48205831 - AluSg/x SINE Alu -14 296 118 219 241 19 19 chr17 37232674 37232728 -48205752 + MER5B DNA MER1_type 125 178 0 1094 171 8 159 chr17 37232991 37233137 -48205343 + AluJo SINE Alu 3 169 -133 1900 108 42 7 chr17 37233137 37233423 -48205057 + AluSg SINE Alu 1 296 -14 1576 150 51 11 chr17 37233429 37233560 -48204920 + AluSx SINE Alu 4 128 -184 1855 134 38 0 chr17 37233560 37233851 -48204629 + AluSx SINE Alu 1 302 -10 1576 150 51 11 chr17 37233851 37233992 -48204488 + AluSx SINE Alu 128 287 -25 1094 171 8 159 chr17 37233992 37234190 -48204290 + AluJo SINE Alu 174 301 -1 1119 189 8 42 chr17 37234707 37234972 -48203508 - AluJb SINE Alu -17 295 40 1607 164 23 23 chr17 37235045 37235350 -48203130 + AluSx SINE Alu 1 305 -7 658 154 0 0 chr17 37235413 37235517 -48202963 - FRAM SINE Alu -18 158 55 228 250 0 0 chr17 37235847 37235907 -48202573 + A-rich Low_complexity Low_complexity 1 60 0 270 0 0 0 chr17 37236116 37236146 -48202334 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2185 76 14 0 chr17 37236151 37236428 -48202052 - AluSc SINE Alu -27 282 2 1930 109 6 26 chr17 37237050 37237363 -48201117 - AluSx SINE Alu -5 307 1 21 0 0 0 chr17 37237366 37237387 -48201093 + AT_rich Low_complexity Low_complexity 1 21 0 2256 98 3 0 chr17 37237636 37237943 -48200537 - AluSp SINE Alu -4 309 2 1866 108 3 59 chr17 37237953 37238295 -48200185 - AluSc SINE Alu 0 309 1 518 248 0 31 chr17 37240793 37240922 -48197558 - L2 LINE L2 0 3272 3148 192 326 58 0 chr17 37241020 37241106 -48197374 - L2 LINE L2 -1182 2132 2042 203 297 62 0 chr17 37241855 37241919 -48196561 + L2 LINE L2 3191 3258 -55 2035 121 17 0 chr17 37241971 37242438 -48196042 + AluSx SINE Alu 6 477 0 180 0 0 0 chr17 37242438 37242458 -48196022 + (GGAA)n Simple_repeat Simple_repeat 1 20 0 2390 168 47 7 chr17 37243341 37243805 -48194675 + L1MB3 LINE L1 5698 6180 -3 1818 116 0 23 chr17 37243825 37244126 -48194354 + AluSg SINE Alu 9 302 -8 1956 136 0 3 chr17 37244151 37244453 -48194027 + AluSx SINE Alu 1 301 -11 2084 108 0 7 chr17 37244647 37244953 -48193527 + AluSc SINE Alu 1 304 -5 714 130 17 0 chr17 37244964 37245079 -48193401 + AluSp SINE Alu 9 125 -188 521 151 27 75 chr17 37245634 37245780 -48192700 + AluSq/x SINE Alu 11 149 -163 430 154 13 13 chr17 37245960 37246038 -48192442 + AluSc SINE Alu 2 79 -230 297 68 0 0 chr17 37246046 37246090 -48192390 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1457 207 7 3 chr17 37246216 37246520 -48191960 + AluJb SINE Alu 1 305 -7 2194 103 0 0 chr17 37246571 37246871 -48191609 + AluSx SINE Alu 5 304 -8 1528 175 3 29 chr17 37246882 37247190 -48191290 + AluSx SINE Alu 4 303 -9 645 141 20 0 chr17 37247200 37247299 -48191181 + U6 snRNA snRNA 2 102 -5 1556 158 3 23 chr17 37247478 37247781 -48190699 + AluSx SINE Alu 1 297 -15 2123 110 0 0 chr17 37247850 37248149 -48190331 + AluSg SINE Alu 1 299 -11 707 187 8 22 chr17 37248156 37248271 -48190209 + AluJb SINE Alu 2 116 -196 1728 140 4 0 chr17 37248271 37248550 -48189930 + AluY SINE Alu 1 280 -31 707 187 8 22 chr17 37248550 37248568 -48189912 + AluJb SINE Alu 116 133 -179 2080 91 7 14 chr17 37248605 37248902 -48189578 + AluSq SINE Alu 1 295 -18 1974 114 0 13 chr17 37249627 37249935 -48188545 + AluSg SINE Alu 1 304 -6 1567 110 9 0 chr17 37250020 37250247 -48188233 + AluSx SINE Alu 1 229 -83 287 257 14 14 chr17 37250347 37250421 -48188059 - AluSp SINE Alu -101 202 129 277 297 8 8 chr17 37250474 37250602 -48187878 - FLAM_C SINE Alu -5 128 1 1470 141 0 55 chr17 37251304 37251482 -48186998 - AluSq SINE Alu -14 299 144 2154 93 6 22 chr17 37251482 37251795 -48186685 - AluSx SINE Alu -4 308 1 1470 141 0 55 chr17 37251795 37251928 -48186552 - AluSq SINE Alu -169 144 5 1987 107 0 0 chr17 37252360 37252632 -48185848 + AluSc SINE Alu 5 276 -33 232 231 19 0 chr17 37254791 37254843 -48183637 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 206 170 43 0 chr17 37255271 37255318 -48183162 + GA-rich Low_complexity Low_complexity 4 52 0 1397 149 24 31 chr17 37258441 37258730 -48179750 - AluSc SINE Alu -9 290 4 271 381 54 18 chr17 37259986 37260154 -48178326 - MIR SINE MIR -55 207 34 2082 106 0 3 chr17 37260406 37260689 -48177791 + AluSq SINE Alu 1 282 -31 297 0 0 0 chr17 37260694 37260727 -48177753 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2194 64 7 7 chr17 37260727 37261036 -48177444 + AluY SINE Alu 1 309 0 224 192 58 0 chr17 37262329 37262381 -48176099 + CT-rich Low_complexity Low_complexity 2 56 0 211 262 0 0 chr17 37262579 37262621 -48175859 + G-rich Low_complexity Low_complexity 2 43 0 243 286 0 0 chr17 37262688 37262751 -48175729 + GA-rich Low_complexity Low_complexity 2 64 0 198 118 0 0 chr17 37262925 37262959 -48175521 + (TG)n Simple_repeat Simple_repeat 1 34 0 339 222 0 0 chr17 37263220 37263301 -48175179 + A-rich Low_complexity Low_complexity 1 81 0 2088 75 3 29 chr17 37263918 37264226 -48174254 + AluSg SINE Alu 1 300 -10 2016 109 3 10 chr17 37265135 37265439 -48173041 - AluSx SINE Alu -10 302 1 384 265 75 20 chr17 37265628 37265775 -48172705 + MIR SINE MIR 47 201 -61 1115 147 90 5 chr17 37265868 37266079 -48172401 + L1MD2 LINE L1 5663 5891 -468 829 209 60 35 chr17 37266081 37266282 -48172198 + AluJo SINE Alu 6 211 -101 847 189 0 68 chr17 37266294 37266484 -48171996 - AluSg/x SINE Alu -3 309 133 553 184 0 0 chr17 37266485 37266583 -48171897 + AluJo SINE Alu 203 300 -12 2010 202 53 9 chr17 37266583 37267019 -48171461 + L1MD2 LINE L1 5890 6344 -15 186 205 103 0 chr17 37267475 37267514 -48170966 + L2 LINE L2 3212 3254 -18 945 251 40 12 chr17 37267949 37268196 -48170284 - MIR SINE MIR -6 256 3 1559 176 59 10 chr17 37269953 37270124 -48168356 - AluJb SINE Alu -9 303 111 513 0 0 0 chr17 37270124 37270181 -48168299 + (TG)n Simple_repeat Simple_repeat 2 58 0 1559 176 59 10 chr17 37270181 37270298 -48168182 - AluJb SINE Alu -201 111 1 24 0 0 0 chr17 37270724 37270748 -48167732 + AT_rich Low_complexity Low_complexity 1 24 0 2042 92 14 27 chr17 37270748 37271043 -48167437 - AluY SINE Alu -20 291 1 2068 82 0 54 chr17 37271097 37271413 -48167067 - AluSc SINE Alu -10 299 1 2002 93 0 17 chr17 37273012 37273302 -48165178 + AluSx SINE Alu 18 302 -10 419 215 0 0 chr17 37274967 37275046 -48163434 + MIR3 SINE MIR 97 175 -33 343 61 0 0 chr17 37275046 37275095 -48163385 - AluSx SINE Alu -1 300 252 1368 111 0 15 chr17 37275096 37275295 -48163185 - AluSx SINE Alu -116 196 1 369 43 0 0 chr17 37276026 37276073 -48162407 + (GA)n Simple_repeat Simple_repeat 1 47 0 2313 81 0 7 chr17 37278679 37278987 -48159493 + AluSp SINE Alu 1 306 -7 716 99 0 81 chr17 37279597 37279635 -48158845 + U6 snRNA snRNA 1 41 -66 2162 72 0 23 chr17 37279635 37279940 -48158540 + AluY SINE Alu 1 298 -13 716 99 0 81 chr17 37279940 37280012 -48158468 + U6 snRNA snRNA 41 102 -5 1852 111 0 40 chr17 37280026 37280350 -48158130 + AluY SINE Alu 1 311 0 2114 85 0 7 chr17 37280353 37280636 -48157844 + AluSx SINE Alu 22 302 -10 1190 178 56 26 chr17 37280645 37280915 -48157565 + AluJo SINE Alu 1 278 -34 2278 69 13 3 chr17 37281329 37281633 -48156847 + AluSp SINE Alu 1 307 -6 790 125 6 65 chr17 37281636 37281804 -48156676 + AluSg/x SINE Alu 153 310 0 186 43 0 0 chr17 37281827 37281850 -48156630 + (GGGTG)n Simple_repeat Simple_repeat 4 26 0 2209 112 3 3 chr17 37283483 37283796 -48154684 + AluSp SINE Alu 1 313 0 1865 105 10 57 chr17 37283802 37284116 -48154364 + AluSq SINE Alu 1 299 -14 616 204 48 60 chr17 37284305 37284472 -48154008 + MIR3 SINE MIR 36 200 -8 2296 51 45 3 chr17 37284651 37284943 -48153537 + AluY SINE Alu 1 304 -7 228 254 75 37 chr17 37287210 37287344 -48151136 - L3b LINE CR1 -187 1396 1258 462 18 0 0 chr17 37287362 37287417 -48151063 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1058 145 0 16 chr17 37287417 37287603 -48150877 - AluSg/x SINE Alu -28 284 102 1750 114 37 4 chr17 37288457 37288773 -48149707 + AluSg SINE Alu 1 325 0 24 0 0 0 chr17 37293734 37293758 -48144722 + AT_rich Low_complexity Low_complexity 1 24 0 549 100 0 0 chr17 37294173 37294263 -48144217 + (GA)n Simple_repeat Simple_repeat 2 91 0 21 0 0 0 chr17 37296890 37296911 -48141569 + AT_rich Low_complexity Low_complexity 1 21 0 447 202 96 10 chr17 37297151 37297255 -48141225 + MER81 DNA DNA 2 114 0 1999 110 3 19 chr17 37297739 37298047 -48140433 + AluSx SINE Alu 1 303 -9 2023 114 0 20 chr17 37298159 37298465 -48140015 + AluSx SINE Alu 1 300 -12 394 105 0 64 chr17 37298512 37298618 -48139862 + AluSx SINE Alu 1 70 -233 1232 178 5 5 chr17 37298718 37298960 -48139520 + AluSx SINE Alu 65 306 0 393 272 101 59 chr17 37300931 37301100 -48137380 + MER5B DNA MER1_type 3 178 0 1724 123 79 14 chr17 37301983 37302275 -48136205 + AluSp SINE Alu 2 312 -1 748 152 14 51 chr17 37302369 37302507 -48135973 + AluJo/FLAM SINE Alu 1 133 -169 2109 114 0 7 chr17 37302507 37302806 -48135674 + AluSx SINE Alu 1 297 -15 1856 128 27 10 chr17 37302806 37303103 -48135377 + AluSx SINE Alu 1 302 -10 1322 98 67 62 chr17 37303105 37303226 -48135254 + AluSq SINE Alu 1 125 -188 2050 107 10 10 chr17 37303226 37303536 -48134944 + AluSp SINE Alu 1 310 -3 1322 98 67 62 chr17 37303536 37303638 -48134842 + AluSq SINE Alu 125 225 -88 246 32 0 0 chr17 37303656 37303687 -48134793 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1800 100 48 4 chr17 37303688 37303982 -48134498 + AluSx SINE Alu 2 307 0 1290 198 10 41 chr17 37304496 37304789 -48133691 + AluJo SINE Alu 16 299 -13 1462 129 108 32 chr17 37304802 37305080 -48133400 + AluSx SINE Alu 11 309 -3 1133 188 6 74 chr17 37305184 37305509 -48132971 + AluSq SINE Alu 1 303 0 1809 139 0 4 chr17 37305548 37305814 -48132666 + AluSq SINE Alu 1 265 -48 203 231 15 15 chr17 37305847 37305912 -48132568 + A-rich Low_complexity Low_complexity 1 65 0 227 171 0 0 chr17 37305930 37305965 -48132515 - Alu SINE Alu -232 70 36 925 191 7 77 chr17 37305966 37306133 -48132347 + AluJb SINE Alu 26 164 -148 1395 185 0 13 chr17 37306133 37306436 -48132044 + AluSg SINE Alu 1 299 -11 925 191 7 77 chr17 37306436 37306567 -48131913 + AluJb SINE Alu 164 303 -9 2192 96 0 3 chr17 37307462 37307764 -48130716 + AluY SINE Alu 1 301 -10 1353 166 44 41 chr17 37307778 37308073 -48130407 + AluJo SINE Alu 6 301 -11 302 326 83 50 chr17 37308154 37308335 -48130145 + L2 LINE L2 3082 3268 -4 1047 133 0 41 chr17 37309216 37309412 -48129068 - AluSc SINE Alu -9 300 113 527 239 150 51 chr17 37309425 37309718 -48128762 + L1ME1 LINE L1 5841 6162 -4 275 206 29 49 chr17 37309714 37309816 -48128664 + L1MD3 LINE L1 7911 8041 -1 * 721 175 8 0 chr17 37309820 37309940 -48128540 + FLAM_C SINE Alu 1 121 -12 1113 211 48 28 chr17 37310907 37311196 -48127284 + AluSp SINE Alu 7 301 -12 2177 110 3 7 chr17 37311396 37311686 -48126794 + AluSg SINE Alu 1 289 -21 1552 193 3 10 chr17 37311686 37311992 -48126488 + AluSg SINE Alu 1 304 -6 806 236 24 28 chr17 37312143 37312355 -48126125 + AluJo SINE Alu 1 211 -101 1454 179 0 30 chr17 37312375 37312672 -48125808 + AluSq SINE Alu 1 288 -25 1586 168 20 56 chr17 37313282 37313586 -48124894 + AluJb SINE Alu 1 293 -19 617 225 50 21 chr17 37313653 37313851 -48124629 - MIR SINE MIR -13 249 50 212 154 0 0 chr17 37315818 37315857 -48122623 + C-rich Low_complexity Low_complexity 5 43 0 2423 80 0 3 chr17 37316690 37317003 -48121477 - AluSx SINE Alu 0 312 1 1524 131 0 122 chr17 37317004 37317340 -48121140 - AluJb SINE Alu -5 297 3 295 333 103 18 chr17 37317467 37317632 -48120848 - MIR SINE MIR -74 188 10 336 295 104 64 chr17 37317826 37317999 -48120481 - MIR SINE MIR -42 220 41 1013 184 3 100 chr17 37318073 37318404 -48120076 - AluJo SINE Alu 0 302 4 1807 135 23 16 chr17 37318459 37318763 -48119717 + AluSc SINE Alu 1 306 -3 874 144 15 0 chr17 37318850 37318982 -48119498 + AluSx SINE Alu 1 134 -179 1636 101 3 125 chr17 37318983 37319328 -48119152 + AluYb8 SINE Alu 1 303 -15 809 188 0 66 chr17 37319458 37319655 -48118825 + AluSg/x SINE Alu 102 285 -27 1070 156 0 42 chr17 37319711 37319903 -48118577 + AluSx SINE Alu 125 308 -2 1054 228 114 22 chr17 37319909 37320181 -48118299 + AluJo SINE Alu 5 301 -1 2391 74 7 10 chr17 37320187 37320486 -48117994 + AluSp SINE Alu 2 299 -14 2431 84 0 3 chr17 37320487 37320795 -48117685 + AluSp SINE Alu 1 307 -6 687 119 0 80 chr17 37320796 37320947 -48117533 + Tigger4(Zombi) DNA MER2_type 2513 2651 -80 21 0 0 0 chr17 37371370 37371391 -48067089 + GC_rich Low_complexity Low_complexity 1 21 0 2485 59 0 0 chr17 37373734 37374038 -48064442 + AluY SINE Alu 1 304 -7 604 195 0 47 chr17 37374052 37374180 -48064300 + FLAM_C SINE Alu 3 124 -19 22 0 0 0 chr17 37374187 37374209 -48064271 + AT_rich Low_complexity Low_complexity 1 22 0 385 303 119 38 chr17 37374232 37374323 -48064157 - MIR SINE MIR -43 219 137 2000 116 14 3 chr17 37374323 37374616 -48063864 + AluSq SINE Alu 1 296 -17 385 303 119 38 chr17 37374616 37374709 -48063771 - MIR SINE MIR -125 137 20 1882 146 58 0 chr17 37375498 37375793 -48062687 + AluJo SINE Alu 1 312 0 1842 157 7 7 chr17 37375840 37376146 -48062334 + AluJo SINE Alu 4 309 -3 21 57 0 0 chr17 37376891 37376926 -48061554 + GC_rich Low_complexity Low_complexity 1 35 0 887 304 97 19 chr17 37378076 37378487 -48059993 + L3 LINE CR1 1130 1572 -5 625 279 34 6 chr17 37378645 37378824 -48059656 + MIR SINE MIR 28 211 -51 2185 96 0 16 chr17 37378926 37379229 -48059251 + AluSg SINE Alu 1 298 -12 2335 60 0 0 chr17 37379229 37379546 -48058934 + AluY SINE Alu 1 317 0 2175 89 14 0 chr17 37379553 37379844 -48058636 + AluY SINE Alu 1 295 -16 197 225 125 62 chr17 37379846 37379926 -48058554 - MIR3 SINE MIR -48 160 76 301 270 113 62 chr17 37380696 37381051 -48057429 - L2 LINE L2 -2 3270 2898 626 141 0 20 chr17 37381454 37381553 -48056927 - AluJ/FLAM SINE Alu -210 102 6 558 241 48 0 chr17 37381577 37381743 -48056737 + L1MC4a LINE L1 5765 5938 -1870 384 137 359 0 chr17 37381770 37381887 -48056593 + Charlie8 DNA MER1_type 106 264 -2153 213 39 0 0 chr17 37382037 37382063 -48056417 + (CTG)n Simple_repeat Simple_repeat 3 28 0 1833 152 10 7 chr17 37382588 37382878 -48055602 - AluJb SINE Alu -17 295 5 821 78 0 5 chr17 37383578 37383720 -48054760 + AluSx SINE Alu 83 296 -13 185 65 32 0 chr17 37383811 37383842 -48054638 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 302 292 192 8 chr17 37383842 37383962 -48054518 - L2 LINE L2 -13 3259 3118 270 262 25 66 chr17 37384216 37384338 -48054142 + MIR3 SINE MIR 44 160 -48 305 255 85 0 chr17 37384361 37384440 -48054040 + MIR SINE MIR 136 228 -34 2171 125 0 3 chr17 37384440 37384752 -48053728 + AluSq SINE Alu 1 311 -2 305 255 85 0 chr17 37384752 37384778 -48053702 + MIR SINE MIR 228 250 -12 936 205 0 21 chr17 37384782 37384972 -48053508 - AluJb SINE Alu -6 306 121 23 33 0 0 chr17 37384994 37385024 -48053456 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 37387145 37387166 -48051314 + GC_rich Low_complexity Low_complexity 1 21 0 212 358 16 32 chr17 37387388 37387511 -48050969 - L2 LINE L2 -547 2767 2647 1616 178 10 23 chr17 37387599 37387730 -48050750 + AluJb SINE Alu 1 132 -180 2152 100 21 3 chr17 37387730 37388019 -48050461 + AluSg SINE Alu 1 294 -16 1616 178 10 23 chr17 37388019 37388191 -48050289 + AluJb SINE Alu 132 300 -12 790 167 0 62 chr17 37388220 37388249 -48050231 + MIR SINE MIR 4 33 -229 2306 87 3 0 chr17 37388249 37388547 -48049933 + AluY SINE Alu 1 299 -12 790 167 0 62 chr17 37388547 37388679 -48049801 + MIR SINE MIR 33 155 -107 2045 90 83 0 chr17 37388779 37389067 -48049413 + AluSx SINE Alu 1 312 0 2043 142 3 19 chr17 37389081 37389398 -48049082 + AluSx SINE Alu 1 312 0 395 244 73 41 chr17 37389504 37389627 -48048853 - MIR SINE MIR -59 203 77 2325 97 3 0 chr17 37389665 37389973 -48048507 + AluSx SINE Alu 1 309 -3 222 305 86 52 chr17 37390026 37390200 -48048280 - L2 LINE L2 -92 3221 3042 279 0 0 0 chr17 37390491 37390522 -48047958 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr17 37390720 37390741 -48047739 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 303 93 0 0 chr17 37391690 37391733 -48046747 + (TG)n Simple_repeat Simple_repeat 1 43 0 348 217 200 42 chr17 37393294 37393414 -48045066 - MIR SINE MIR -71 191 53 2032 113 30 0 chr17 37393433 37393733 -48044747 + AluSx SINE Alu 1 309 -3 409 348 55 6 chr17 37393773 37393954 -48044526 - L2 LINE L2 -5 3308 3119 322 235 76 17 chr17 37393981 37394100 -48044380 - MIR SINE MIR -109 153 28 2179 114 7 0 chr17 37394686 37394994 -48043486 - AluSp SINE Alu 0 313 4 191 289 53 0 chr17 37394994 37395070 -48043410 + MIR SINE MIR 65 144 -118 226 118 98 0 chr17 37395225 37395276 -48043204 + MER53 DNA DNA 1 56 -133 1961 114 37 10 chr17 37395281 37395580 -48042900 - AluSx SINE Alu -1 311 5 2030 130 3 13 chr17 37395582 37395883 -48042597 - AluSx SINE Alu -13 299 2 1703 179 0 10 chr17 37395897 37396194 -48042286 - AluJo SINE Alu -13 299 6 21 36 0 0 chr17 37396198 37396226 -48042254 + AT_rich Low_complexity Low_complexity 1 28 0 828 88 0 0 chr17 37396227 37396340 -48042140 + AluSg/x SINE Alu 189 301 -8 539 171 9 0 chr17 37396341 37396452 -48042028 + MER53 DNA DNA 73 184 -5 224 326 22 11 chr17 37396655 37396744 -48041736 - L2 LINE L2 -527 2787 2698 1841 60 0 21 chr17 37396756 37396991 -48041489 + AluY SINE Alu 1 230 -81 1384 73 17 0 chr17 37396991 37397170 -48041310 + AluSp SINE Alu 87 268 -45 2109 117 0 3 chr17 37397185 37397484 -48040996 + AluSx SINE Alu 1 298 -14 2351 90 0 0 chr17 37397983 37398293 -48040187 + AluSg SINE Alu 1 310 0 505 255 224 10 chr17 37399707 37399899 -48038581 - MIR SINE MIR -6 256 24 1142 114 13 0 chr17 37400167 37400325 -48038155 - AluSq SINE Alu -20 293 134 2172 84 20 7 chr17 37400325 37400624 -48037856 - AluY SINE Alu -8 303 1 543 242 54 7 chr17 37400624 37400773 -48037707 - MIR3 SINE MIR -12 196 41 2319 80 7 3 chr17 37401463 37401765 -48036715 - AluSg SINE Alu -7 303 1 2040 118 6 22 chr17 37402343 37402657 -48035823 + AluSx SINE Alu 1 309 -3 2209 97 13 0 chr17 37403359 37403659 -48034821 + AluSg SINE Alu 1 304 -6 21 36 0 0 chr17 37404112 37404140 -48034340 + AT_rich Low_complexity Low_complexity 1 28 0 556 226 52 0 chr17 37404485 37404600 -48033880 - FLAM_A SINE Alu -12 121 1 1898 123 3 20 chr17 37404657 37404958 -48033522 - AluSg SINE Alu -14 296 1 24 0 0 0 chr17 37404961 37404985 -48033495 + AT_rich Low_complexity Low_complexity 1 24 0 1601 117 4 0 chr17 37405003 37405233 -48033247 + AluSx SINE Alu 1 231 -81 258 286 41 0 chr17 37405274 37405372 -48033108 - L1M4 LINE L1 -1118 5028 4927 469 87 22 87 chr17 37405373 37405465 -48033015 - AluSp/q SINE Alu -7 306 221 1740 118 9 75 chr17 37405691 37405832 -48032648 + AluSx SINE Alu 3 152 -160 2013 96 0 0 chr17 37405832 37406104 -48032376 + AluSc SINE Alu 1 272 -37 246 32 0 0 chr17 37406106 37406137 -48032343 + (CAA)n Simple_repeat Simple_repeat 1 31 0 1740 118 9 75 chr17 37406137 37406324 -48032156 + AluSx SINE Alu 153 312 0 652 243 116 21 chr17 37406815 37407004 -48031476 - MIR SINE MIR -49 213 7 35 24 0 0 chr17 37407442 37407484 -48030996 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr17 37407530 37407551 -48030929 + AT_rich Low_complexity Low_complexity 1 21 0 1871 83 112 7 chr17 37408769 37409045 -48029435 - AluSg SINE Alu -5 305 1 224 209 0 0 chr17 37410821 37410864 -48027616 + (CAGAGA)n Simple_repeat Simple_repeat 2 44 0 206 170 43 0 chr17 37411299 37411346 -48027134 + GA-rich Low_complexity Low_complexity 4 52 0 2285 65 10 0 chr17 37414433 37414724 -48023756 - AluSg SINE Alu -16 294 1 736 116 39 39 chr17 37414967 37415096 -48023384 + AluJo/FLAM SINE Alu 2 130 -172 1560 106 122 4 chr17 37415097 37415351 -48023129 + AluSx SINE Alu 28 311 -1 203 161 18 0 chr17 37416204 37416260 -48022220 + (CGG)n Simple_repeat Simple_repeat 2 58 0 24 32 0 0 chr17 37417087 37417118 -48021362 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr17 37419518 37419542 -48018938 + AT_rich Low_complexity Low_complexity 1 24 0 2234 89 0 7 chr17 37419548 37419851 -48018629 + AluSg SINE Alu 1 301 -9 477 285 71 33 chr17 37420141 37420212 -48018268 - MIR SINE MIR -15 247 180 2001 81 12 56 chr17 37420212 37420535 -48017945 - AluSg SINE Alu -1 309 1 477 285 71 33 chr17 37420535 37420697 -48017783 - MIR SINE MIR -82 180 12 420 203 40 0 chr17 37420777 37420851 -48017629 - AluJ/FLAM SINE Alu -224 78 2 961 107 43 0 chr17 37421315 37421455 -48017025 + AluSq/x SINE Alu 1 146 -167 346 279 43 125 chr17 37421504 37421544 -48016936 + MIR3 SINE MIR 17 59 -149 2355 70 0 7 chr17 37421544 37421846 -48016634 - AluY SINE Alu -10 301 2 346 279 43 125 chr17 37421846 37421901 -48016579 + MIR3 SINE MIR 59 117 -91 2230 114 0 0 chr17 37421901 37422207 -48016273 - AluSq SINE Alu -7 306 1 346 279 43 125 chr17 37422207 37422318 -48016162 + MIR3 SINE MIR 117 207 -1 2153 104 3 0 chr17 37423079 37423378 -48015102 - AluSx SINE Alu -12 300 1 2014 123 20 0 chr17 37423662 37423964 -48014516 + AluSx SINE Alu 1 308 -4 2107 54 22 18 chr17 37423966 37424242 -48014238 + AluY SINE Alu 23 299 -12 29 0 0 0 chr17 37425185 37425214 -48013266 + AT_rich Low_complexity Low_complexity 1 29 0 2102 104 10 0 chr17 37425214 37425513 -48012967 - AluSq SINE Alu -11 302 1 1669 131 73 0 chr17 37425515 37425790 -48012690 - AluSp SINE Alu -18 295 1 2035 133 7 0 chr17 37426055 37426363 -48012117 - AluSx SINE Alu -2 310 1 1785 132 34 3 chr17 37426364 37426659 -48011821 - AluSg SINE Alu -6 304 1 206 219 85 61 chr17 37426991 37427073 -48011407 + MIR SINE MIR 54 137 -71 771 139 7 49 chr17 37427237 37427381 -48011099 - FLAM_C SINE Alu 0 143 6 1918 126 11 0 chr17 37427469 37427754 -48010726 - AluSg1 SINE Alu -21 288 1 1582 148 61 11 chr17 37427785 37427942 -48010538 - AluJb SINE Alu -21 291 113 2168 92 0 20 chr17 37427942 37428246 -48010234 - AluSx SINE Alu -14 298 1 1582 148 61 11 chr17 37428246 37428365 -48010115 - AluJb SINE Alu -199 113 1 2064 114 0 0 chr17 37428678 37428984 -48009496 - AluY SINE Alu 0 306 1 2354 78 0 7 chr17 37429391 37429700 -48008780 - AluSq SINE Alu -5 308 2 2369 72 0 3 chr17 37429740 37430045 -48008435 + AluSc SINE Alu 2 305 -4 1679 179 0 10 chr17 37430050 37430346 -48008134 - AluSx SINE Alu -19 293 1 1712 168 37 48 chr17 37430578 37430643 -48007837 - MER47A DNA MER2_type -1976 347 283 1970 147 0 0 chr17 37430643 37430942 -48007538 + AluJo SINE Alu 1 299 -13 2243 84 3 0 chr17 37430946 37431243 -48007237 + AluSq SINE Alu 5 302 -11 1712 168 37 48 chr17 37431243 37431523 -48006957 - MER47A DNA MER2_type -2043 280 1 1864 132 20 3 chr17 37431878 37432174 -48006306 - AluSx SINE Alu -11 301 1 1345 127 147 4 chr17 37432189 37432457 -48006023 - AluSg1 SINE Alu 0 304 2 2235 88 14 0 chr17 37432475 37432771 -48005709 - AluSc SINE Alu -9 300 1 400 148 0 0 chr17 37433191 37433259 -48005221 - AluJ/FRAM SINE Alu -13 289 228 914 178 0 0 chr17 37433293 37433450 -48005030 - FRAM SINE Alu -24 152 1 1879 103 40 26 chr17 37433544 37433846 -48004634 - AluSg SINE Alu -4 306 1 35 54 0 22 chr17 37433939 37433976 -48004504 + AT_rich Low_complexity Low_complexity 1 37 -53 2008 124 3 0 chr17 37433976 37434275 -48004205 - AluSc SINE Alu -9 300 1 1507 199 7 3 chr17 37434277 37434569 -48003911 - AluJo SINE Alu -19 293 1 35 54 0 22 chr17 37434569 37434620 -48003860 + AT_rich Low_complexity Low_complexity 38 90 0 2293 77 3 3 chr17 37434631 37434930 -48003550 + AluSx SINE Alu 1 299 -13 589 263 8 0 chr17 37435048 37435181 -48003299 - FLAM_C SINE Alu -8 135 2 2184 97 0 26 chr17 37435335 37435646 -48002834 - AluSc SINE Alu -6 303 1 1303 218 10 30 chr17 37435670 37435968 -48002512 - AluJo SINE Alu -8 294 3 2266 80 0 0 chr17 37436058 37436359 -48002121 - AluY SINE Alu -10 301 1 2084 97 7 3 chr17 37436406 37436706 -48001774 - AluSc SINE Alu -8 301 1 1668 173 3 10 chr17 37436706 37437001 -48001479 - AluJb SINE Alu -8 304 12 1722 146 20 20 chr17 37437021 37437323 -48001157 - AluJo SINE Alu -10 302 1 2125 105 0 0 chr17 37437347 37437643 -48000837 - AluSq SINE Alu -17 296 1 998 280 78 77 chr17 37437720 37438507 -47999973 - L2 LINE L2 -4 3309 2519 1247 136 0 126 chr17 37438531 37438714 -47999766 - AluJo SINE Alu -20 292 158 1582 183 13 7 chr17 37438714 37439020 -47999460 - AluJo SINE Alu -4 308 1 1247 136 0 126 chr17 37439020 37439130 -47999350 - AluJo SINE Alu -154 158 36 1086 148 21 160 chr17 37439136 37439283 -47999197 - L1M3 LINE L1 -561 5610 5444 2114 72 58 0 chr17 37439283 37439575 -47998905 - AluSp SINE Alu -4 309 1 1086 148 21 160 chr17 37439575 37439610 -47998870 - L1M3 LINE L1 -727 5444 5406 2215 88 0 3 chr17 37439610 37439906 -47998574 + AluSx SINE Alu 1 295 -17 1086 148 21 160 chr17 37439906 37440060 -47998420 - L1M3 LINE L1 -765 5406 5320 582 244 31 0 chr17 37440062 37440189 -47998291 - FLAM_A SINE Alu -7 135 5 376 101 58 0 chr17 37440193 37440262 -47998218 - L1M LINE L1 -2457 5328 5256 714 149 88 41 chr17 37440282 37440476 -47998004 - L1M4 LINE L1 -5458 1084 882 1236 176 64 22 chr17 37440511 37440649 -47997831 - AluJo SINE Alu -32 280 149 5264 67 17 31 chr17 37440649 37440718 -47997762 - LTR8 LTR ERV1 0 691 623 2386 52 0 10 chr17 37440718 37441027 -47997453 + AluY SINE Alu 1 306 -5 5264 67 17 31 chr17 37441027 37441658 -47996822 - LTR8 LTR ERV1 -68 623 1 1236 176 64 22 chr17 37441658 37441786 -47996694 - AluJo SINE Alu -163 149 3 2865 216 104 50 chr17 37441788 37442373 -47996107 - L1M4 LINE L1 -5650 892 340 2071 95 0 3 chr17 37442373 37442683 -47995797 - AluSg SINE Alu 0 309 1 2865 216 104 50 chr17 37442683 37442849 -47995631 - L1M4 LINE L1 -6202 340 184 1418 128 49 8 chr17 37442849 37443092 -47995388 - L1MA4A LINE L1 -11 6292 6040 2865 216 104 50 chr17 37443092 37443184 -47995296 - L1M4 LINE L1 -6358 184 1 2149 82 4 0 chr17 37443436 37443715 -47994765 + AluSc SINE Alu 1 280 -29 195 42 0 0 chr17 37443718 37443742 -47994738 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 1835 122 0 41 chr17 37443968 37444262 -47994218 - AluSx SINE Alu -18 294 13 2039 117 3 10 chr17 37444274 37444581 -47993899 - AluSq SINE Alu -8 305 1 180 283 50 0 chr17 37445369 37445429 -47993051 - L2 LINE L2 -214 3058 2996 2064 97 7 36 chr17 37445596 37445904 -47992576 + AluSq SINE Alu 1 299 -14 2351 72 3 0 chr17 37445978 37446282 -47992198 - AluSc SINE Alu -4 305 1 389 336 75 68 chr17 37446398 37446693 -47991787 + HAL1 LINE L1 154 450 -2057 1247 106 0 0 chr17 37446693 37446863 -47991617 + AluSg/x SINE Alu 134 303 -9 316 337 15 74 chr17 37446876 37447078 -47991402 + HAL1 LINE L1 436 625 -1882 22 0 0 0 chr17 37447161 37447183 -47991297 + AT_rich Low_complexity Low_complexity 1 22 0 1850 114 53 0 chr17 37447303 37447584 -47990896 - AluSp SINE Alu -17 296 1 2629 16 0 29 chr17 37447700 37448016 -47990464 - AluY SINE Alu -4 307 1 1874 138 3 3 chr17 37448016 37448312 -47990168 - AluSx SINE Alu -16 296 1 781 206 0 61 chr17 37448394 37448574 -47989906 - FRAM SINE Alu -14 162 1 1333 201 61 4 chr17 37448587 37448865 -47989615 + AluJo SINE Alu 1 294 -8 1079 95 0 7 chr17 37448870 37449017 -47989463 + AluSg SINE Alu 1 146 -164 1787 109 24 0 chr17 37449017 37449264 -47989216 + AluSg SINE Alu 51 303 -7 234 352 16 32 chr17 37449267 37449392 -47989088 - L3 LINE CR1 -822 755 633 2274 102 0 0 chr17 37449569 37449872 -47988608 + AluY SINE Alu 4 306 -5 1904 157 0 10 chr17 37450121 37450414 -47988066 - AluJo SINE Alu -22 290 1 1687 132 13 72 chr17 37450443 37450747 -47987733 + AluSx SINE Alu 1 286 -26 24 85 0 0 chr17 37450747 37450806 -47987674 + AT_rich Low_complexity Low_complexity 1 59 0 1333 269 141 26 chr17 37450851 37450906 -47987574 + HAL1 LINE L1 1154 1201 -1306 2295 128 0 0 chr17 37450906 37451212 -47987268 + AluSx SINE Alu 3 308 -4 1333 269 141 26 chr17 37451212 37451338 -47987142 + HAL1 LINE L1 1201 1311 -1196 2284 100 3 3 chr17 37451338 37451638 -47986842 + AluY SINE Alu 1 300 -11 1333 269 141 26 chr17 37451638 37452177 -47986303 + HAL1 LINE L1 1311 1958 -549 644 196 196 0 chr17 37452380 37452523 -47985957 + FAM SINE Alu 1 171 -4 228 163 23 0 chr17 37453562 37453605 -47984875 - MLT1H LTR MaLR -15 580 537 900 227 32 106 chr17 37453667 37453888 -47984592 - MLT1H LTR MaLR -185 364 177 1744 172 13 3 chr17 37453888 37454190 -47984290 - AluJb SINE Alu -7 305 1 900 227 32 106 chr17 37454190 37454316 -47984164 - MLT1H LTR MaLR -372 177 43 2307 108 0 7 chr17 37454332 37454637 -47983843 + AluSx SINE Alu 3 305 -7 1697 177 23 16 chr17 37454680 37454990 -47983490 - AluJb SINE Alu 0 312 1 921 121 0 29 chr17 37455064 37455204 -47983276 + FLAM_C SINE Alu 1 136 -7 2083 81 7 48 chr17 37455207 37455529 -47982951 + AluSp SINE Alu 1 310 0 2143 108 14 10 chr17 37455603 37455898 -47982582 + AluSx SINE Alu 1 296 -16 1584 72 5 0 chr17 37455898 37456091 -47982389 + AluSp SINE Alu 1 194 -119 705 173 0 0 chr17 37456092 37456202 -47982278 - AluJo/FLAM SINE Alu -201 111 2 2370 76 0 20 chr17 37456212 37456515 -47981965 - AluY SINE Alu -14 297 1 701 176 0 8 chr17 37456586 37456705 -47981775 - FLAM_C SINE Alu -24 119 2 2333 93 0 0 chr17 37456715 37457005 -47981475 - AluY SINE Alu -21 290 1 608 257 43 11 chr17 37457198 37457422 -47981058 + MLT2E LTR ERVL 343 628 0 234 290 30 38 chr17 37457423 37457554 -47980926 + MST-int LTR MaLR 3 132 -1519 918 291 99 12 chr17 37457702 37458046 -47980434 - MLT2E LTR ERVL -254 374 1 1672 168 94 13 chr17 37458110 37458491 -47979989 - L1MB3 LINE L1 -9 6174 5763 * 2138 172 58 72 chr17 37458475 37458903 -47979577 - L1ME1 LINE L1 -237 5929 5496 1847 90 86 0 chr17 37458903 37459158 -47979322 - AluSq SINE Alu -16 297 21 2138 172 58 72 chr17 37459158 37459170 -47979310 - L1ME1 LINE L1 -670 5496 5485 1405 144 50 77 chr17 37459170 37459469 -47979011 - AluSx SINE Alu -21 291 1 2138 172 58 72 chr17 37459469 37459777 -47978703 - L1ME1 LINE L1 -681 5485 5180 2230 126 3 0 chr17 37459810 37460120 -47978360 - AluSx SINE Alu -1 311 1 2067 169 11 49 chr17 37460120 37460582 -47977898 + MLT2B2 LTR ERVL 15 514 -1 477 199 125 97 chr17 37460586 37460802 -47977678 + L1MCa LINE L1 1738 2033 -4467 780 163 39 13 chr17 37460813 37460966 -47977514 + FRAM SINE Alu 1 156 -20 1458 202 29 101 chr17 37461091 37461227 -47977253 + L1M4 LINE L1 4764 4908 -1238 2316 90 7 7 chr17 37461227 37461528 -47976952 - AluSp SINE Alu -12 301 1 1458 202 29 101 chr17 37461528 37461557 -47976923 + L1M4 LINE L1 4908 4938 -1208 1806 161 3 30 chr17 37461557 37461855 -47976625 + AluJb SINE Alu 1 290 -22 1762 199 0 0 chr17 37461865 37462156 -47976324 + AluJb SINE Alu 1 291 -21 1458 202 29 101 chr17 37462156 37462284 -47976196 + L1M4 LINE L1 4947 5083 -1063 2319 99 0 3 chr17 37462284 37462587 -47975893 - AluSg SINE Alu -8 302 1 1458 202 29 101 chr17 37462587 37462641 -47975839 + L1M4 LINE L1 5083 5139 -1007 2515 75 3 0 chr17 37462641 37462947 -47975533 - AluSq SINE Alu -6 307 1 1458 202 29 101 chr17 37462947 37463100 -47975380 + L1M4 LINE L1 5139 5241 -905 288 164 0 6 chr17 37463122 37463186 -47975294 + Alu SINE Alu 1 43 -258 456 154 13 0 chr17 37463186 37463264 -47975216 - AluJ/FLAM SINE Alu -221 91 13 2162 109 3 3 chr17 37463289 37463598 -47974882 + AluSq SINE Alu 1 309 0 21 0 0 0 chr17 37463771 37463792 -47974688 + AT_rich Low_complexity Low_complexity 1 21 0 290 306 27 18 chr17 37463915 37464026 -47974454 - L2 LINE L2 -12 3260 3149 309 252 209 7 chr17 37464301 37464440 -47974040 - MER104 DNA Tc2 0 180 14 766 110 15 52 chr17 37464443 37464579 -47973901 - L1MB2 LINE L1 -10 6161 6031 2271 89 0 11 chr17 37464597 37464921 -47973559 + AluSc SINE Alu 1 321 0 1550 154 140 0 chr17 37464926 37465219 -47973261 - MER44D DNA MER2_type -1 608 5 1106 278 98 12 chr17 37465287 37465694 -47972786 - MLT1J LTR MaLR -13 498 57 2114 132 10 3 chr17 37465810 37466120 -47972360 - AluSx SINE Alu 0 312 1 704 183 8 0 chr17 37466146 37466272 -47972208 - FLAM_A SINE Alu -6 127 1 2355 98 0 3 chr17 37467161 37467468 -47971012 - AluSq SINE Alu -7 306 1 582 229 10 90 chr17 37467572 37467773 -47970707 - MER5A DNA MER1_type -3 186 2 1963 128 37 0 chr17 37468004 37468302 -47970178 - AluSp SINE Alu -2 311 3 522 77 0 135 chr17 37468513 37468569 -47969911 - MER46B DNA MER2_type -2673 58 145 2564 57 0 0 chr17 37468569 37468866 -47969614 - AluY SINE Alu -14 297 1 522 77 0 135 chr17 37468866 37468913 -47969567 - MER46B DNA MER2_type -2585 146 94 741 253 6 0 chr17 37468913 37469079 -47969401 - AluJb SINE Alu -9 303 137 312 137 20 0 chr17 37469079 37469130 -47969350 + Tigger4(Zombi) DNA MER2_type 45 96 -2635 459 107 0 0 chr17 37469168 37469243 -47969237 - Alu SINE Alu -2 310 236 2278 120 0 0 chr17 37469243 37469551 -47968929 - AluSx SINE Alu -4 308 1 1520 180 19 0 chr17 37469551 37469807 -47968673 + AluJo SINE Alu 26 286 -26 202 320 13 13 chr17 37469852 37469930 -47968550 + L3 LINE CR1 1122 1199 -378 699 179 0 0 chr17 37469931 37470043 -47968437 + AluJo/FLAM SINE Alu 3 114 -198 2431 77 3 0 chr17 37470043 37470340 -47968140 - AluSc SINE Alu -11 298 1 333 26 0 0 chr17 37470363 37470401 -47968079 - MER4E LTR ERV1 -76 690 653 7568 37 5 1 chr17 37470534 37471825 -47966655 + L1PA5 LINE L1 4859 6151 -3 1594 161 3 64 chr17 37472170 37472481 -47965999 - AluJo SINE Alu -20 292 1 417 107 0 0 chr17 37472482 37472538 -47965942 - AluJb SINE Alu -167 145 90 262 330 33 0 chr17 37472544 37472635 -47965845 - L2 LINE L2 -19 3253 3160 2051 134 10 0 chr17 37472680 37472970 -47965510 + AluSq SINE Alu 1 293 -20 224 294 159 16 chr17 37473252 37473378 -47965102 + L2 LINE L2 3164 3307 -6 1901 150 0 19 chr17 37473703 37474017 -47964463 - AluSx SINE Alu -4 308 1 1052 195 0 10 chr17 37474154 37474359 -47964121 - AluJb SINE Alu -14 298 96 2176 124 0 3 chr17 37474359 37474658 -47963822 + AluSg1 SINE Alu 1 298 -11 1242 132 0 0 chr17 37474658 37474825 -47963655 + AluSg/x SINE Alu 132 298 -12 642 191 0 0 chr17 37474829 37474934 -47963546 - AluJ SINE Alu -205 107 3 248 266 202 0 chr17 37474962 37475056 -47963424 + MIR SINE MIR 122 234 -28 1797 156 0 56 chr17 37475619 37475788 -47962692 - AluJb SINE Alu -10 302 158 2410 70 0 7 chr17 37475788 37476087 -47962393 - AluY SINE Alu -14 297 1 1797 156 0 56 chr17 37476087 37476237 -47962243 - AluJb SINE Alu -154 158 1 255 310 103 9 chr17 37476427 37476543 -47961937 - L2 LINE L2 -592 2722 2596 291 297 0 0 chr17 37476825 37476899 -47961581 - MLT1I LTR MaLR -268 141 68 922 179 52 107 chr17 37477839 37477995 -47960485 - L1MC4a LINE L1 0 7808 7645 1912 93 48 48 chr17 37477995 37478126 -47960354 + AluSx SINE Alu 5 135 -177 2271 89 3 0 chr17 37478126 37478418 -47960062 + AluSg SINE Alu 1 293 -17 1912 93 48 48 chr17 37478418 37478576 -47959904 + AluSx SINE Alu 134 294 -18 2073 68 39 25 chr17 37478584 37478863 -47959617 + AluSc SINE Alu 10 292 -17 922 179 52 107 chr17 37478863 37478988 -47959492 - L1MC4a LINE L1 -170 7638 7534 983 234 10 0 chr17 37479062 37479259 -47959221 - AluJb SINE Alu -38 274 76 282 111 0 153 chr17 37479262 37479334 -47959146 - AluJo SINE Alu -159 143 83 2004 135 7 3 chr17 37479334 37479622 -47958858 - AluSx SINE Alu -9 303 15 1399 217 97 50 chr17 37479636 37479956 -47958524 - L1MC4a LINE L1 -319 7489 7185 7153 51 29 21 chr17 37479956 37481575 -47956905 - SVA Other Other -723 1386 1 1399 217 97 50 chr17 37481575 37481670 -47956810 - L1MC4a LINE L1 -623 7185 7096 2283 117 0 0 chr17 37481670 37481977 -47956503 - AluSg SINE Alu -3 307 1 1399 217 97 50 chr17 37481977 37482117 -47956363 - L1MC4a LINE L1 -712 7096 6906 195 42 0 0 chr17 37482379 37482403 -47956077 + (TCCCC)n Simple_repeat Simple_repeat 1 24 0 1135 185 122 20 chr17 37482408 37482662 -47955818 - AluJo SINE Alu -32 280 1 1506 87 5 5 chr17 37482913 37483109 -47955371 - AluSg/x SINE Alu -5 305 110 3672 87 6 2 chr17 37483117 37483602 -47954878 - LTR15 LTR ERV1 -6 487 1 833 108 0 0 chr17 37483602 37483713 -47954767 - AluYb8 SINE Alu -207 111 1 10419 69 17 8 chr17 37484028 37485347 -47953133 - SVA Other Other 0 1386 57 287 24 0 24 chr17 37485350 37485391 -47953089 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 635 215 23 0 chr17 37485422 37485552 -47952928 + FLAM_A SINE Alu 1 133 0 1417 206 14 24 chr17 37485570 37485680 -47952800 - MER68 LTR ERV1 0 562 452 2445 79 3 0 chr17 37485680 37485984 -47952496 + AluY SINE Alu 1 305 -6 1417 206 14 24 chr17 37485984 37486160 -47952320 - MER68 LTR ERV1 -110 452 279 778 165 31 0 chr17 37486150 37486277 -47952203 - MER68 LTR ERV1 -431 131 1 * 226 224 0 20 chr17 37486409 37486458 -47952022 + MIR SINE MIR 8 55 -207 358 217 0 0 chr17 37486569 37486638 -47951842 + MLT1A1 LTR MaLR 293 361 -4 393 318 91 48 chr17 37486839 37487091 -47951389 - L2 LINE L2 -13 3259 2997 357 123 0 77 chr17 37487091 37487120 -47951360 + AluJo SINE Alu 109 132 -170 1936 153 20 0 chr17 37487120 37487420 -47951060 + AluSx SINE Alu 1 306 -6 357 123 0 77 chr17 37487420 37487455 -47951025 + AluJo SINE Alu 132 168 -134 2177 122 0 3 chr17 37487901 37488189 -47950291 - AluSx SINE Alu -25 287 1 2212 115 3 16 chr17 37488194 37488506 -47949974 - AluSx SINE Alu 0 312 5 1780 184 14 3 chr17 37488512 37488805 -47949675 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 37488818 37489456 -47949024 - L1MC4 LINE L1 -141 7901 7253 1525 194 14 7 chr17 37489456 37489750 -47948730 - AluJo SINE Alu -16 296 1 4158 195 57 75 chr17 37489750 37490244 -47948236 - L1MC4 LINE L1 -789 7253 6790 2493 77 3 3 chr17 37490244 37490555 -47947925 - AluSq SINE Alu -2 311 1 4158 195 57 75 chr17 37490555 37490649 -47947831 - L1MC4 LINE L1 -1252 6790 6696 1374 90 0 0 chr17 37490653 37490830 -47947650 + AluY SINE Alu 133 309 -2 729 219 153 29 chr17 37491002 37491273 -47947207 - L1MD3 LINE L1 -1223 6585 6296 250 309 0 0 chr17 37491280 37491335 -47947145 + AluJo SINE Alu 1 55 -247 2043 142 3 16 chr17 37491335 37491638 -47946842 + AluSx SINE Alu 1 299 -13 1498 156 0 39 chr17 37491638 37491892 -47946588 + AluJo SINE Alu 44 289 -23 1329 171 0 9 chr17 37491892 37492114 -47946366 - AluJb SINE Alu -23 289 70 2233 169 54 10 chr17 37492241 37492649 -47945831 - MSTB LTR MaLR 0 426 1 792 252 192 9 chr17 37492679 37492996 -47945484 - L1ME LINE L1 -5520 550 176 541 279 29 0 chr17 37493001 37493137 -47945343 - L1ME LINE L1 -5925 145 6 334 231 33 50 chr17 37493142 37493263 -47945217 - L1MC4a LINE L1 -1639 6169 6051 1757 162 14 14 chr17 37493309 37493599 -47944881 - AluJb SINE Alu -22 290 1 2153 99 20 7 chr17 37493937 37494230 -47944250 + AluSx SINE Alu 1 297 -15 471 245 49 28 chr17 37494230 37494373 -47944107 - MER5A DNA MER1_type -32 157 12 2204 62 26 49 chr17 37494442 37494747 -47943733 + AluSg SINE Alu 1 298 -12 2491 71 3 0 chr17 37495252 37495549 -47942931 + AluY SINE Alu 1 298 -13 1394 91 0 0 chr17 37495549 37495725 -47942755 + AluY SINE Alu 133 308 -3 33 0 0 0 chr17 37496016 37496049 -47942431 + AT_rich Low_complexity Low_complexity 1 33 0 631 168 134 17 chr17 37496342 37496461 -47942019 - FLAM_C SINE Alu 0 133 1 2431 94 0 7 chr17 37496717 37497025 -47941455 - AluSq SINE Alu -7 306 1 2047 111 3 44 chr17 37497034 37497349 -47941131 - AluSg SINE Alu -8 302 1 1801 167 31 3 chr17 37497634 37497928 -47940552 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr17 37498226 37498247 -47940233 + AT_rich Low_complexity Low_complexity 1 21 0 785 162 15 29 chr17 37498610 37498746 -47939734 + FLAM_C SINE Alu 2 135 -8 2070 113 38 0 chr17 37498824 37499116 -47939364 - AluSg SINE Alu -7 303 1 2205 104 3 0 chr17 37499263 37499552 -47938928 - AluSg SINE Alu -20 290 1 2195 93 3 10 chr17 37499750 37500062 -47938418 - AluSp SINE Alu 0 313 1 238 100 0 0 chr17 37500069 37500109 -47938371 - L1MB3 LINE L1 0 6183 6144 238 260 96 0 chr17 37500325 37500398 -47938082 - L1MC5 LINE L1 -62 7899 7820 2509 61 3 0 chr17 37500521 37500831 -47937649 + AluY SINE Alu 1 311 0 399 274 66 77 chr17 37500876 37500991 -47937489 - L1M4 LINE L1 -1300 4846 4731 2112 114 0 0 chr17 37500991 37501272 -47937208 + AluSg SINE Alu 1 281 -29 399 274 66 77 chr17 37501272 37501518 -47936962 - L1M4 LINE L1 -1415 4731 4489 2017 101 0 20 chr17 37501519 37501817 -47936663 - AluSx SINE Alu -20 292 1 2111 228 98 20 chr17 37501840 37502205 -47936275 - L1MC4 LINE L1 -962 7080 6656 201 74 0 0 chr17 37502205 37502232 -47936248 + (TG)n Simple_repeat Simple_repeat 2 28 0 2111 228 98 20 chr17 37502232 37502415 -47936065 - L1MC4 LINE L1 -1386 6656 6489 786 248 26 0 chr17 37502423 37502576 -47935904 - FRAM SINE Alu -16 160 4 519 31 0 0 chr17 37502649 37502714 -47935766 + (TC)n Simple_repeat Simple_repeat 1 65 0 180 0 0 0 chr17 37503107 37503127 -47935353 + (TA)n Simple_repeat Simple_repeat 1 20 0 745 138 109 0 chr17 37503190 37503329 -47935151 + L1MB7 LINE L1 5357 5511 -667 744 84 0 0 chr17 37503329 37503424 -47935056 + AluSq/x SINE Alu 42 136 -176 2261 111 3 7 chr17 37503424 37503730 -47934750 + AluSx SINE Alu 1 305 -7 530 186 0 93 chr17 37503730 37503859 -47934621 + L1MB7 LINE L1 5506 5622 -552 1656 149 16 58 chr17 37503860 37504169 -47934311 + AluSx SINE Alu 1 296 -16 2035 152 77 12 chr17 37504170 37504572 -47933908 + L1MB7 LINE L1 5715 6142 -42 2336 99 3 0 chr17 37504586 37504889 -47933591 + AluSp SINE Alu 1 304 -9 2219 112 3 6 chr17 37504988 37505301 -47933179 + AluSx SINE Alu 1 312 0 2239 111 0 0 chr17 37505304 37505602 -47932878 + AluSg SINE Alu 1 298 -12 2388 72 3 13 chr17 37505645 37505952 -47932528 + AluY SINE Alu 1 304 -7 2198 103 3 0 chr17 37506094 37506386 -47932094 - AluSg SINE Alu -17 293 1 479 145 63 138 chr17 37507271 37507332 -47931148 - LTR45B LTR ERV1 0 489 425 1687 168 7 32 chr17 37507332 37507507 -47930973 - AluJo SINE Alu -6 306 141 2200 116 3 10 chr17 37507507 37507817 -47930663 - AluSx SINE Alu -4 308 1 1687 168 7 32 chr17 37507817 37507950 -47930530 - AluJo SINE Alu -171 141 6 479 145 63 138 chr17 37507950 37508047 -47930433 - LTR45B LTR ERV1 -64 425 343 1677 148 29 35 chr17 37508343 37508654 -47929826 - AluJb SINE Alu -3 309 1 1750 115 43 0 chr17 37508662 37508953 -47929527 - AluSx SINE Alu 0 349 48 338 123 15 15 chr17 37508953 37509018 -47929462 + AluSp/q SINE Alu 239 303 0 1690 152 68 13 chr17 37509194 37509504 -47928976 - LTR49-int LTR ERV1 -651 5680 5354 606 115 13 0 chr17 37509504 37509582 -47928898 + AluSp SINE Alu 115 193 -120 25 53 0 18 chr17 37509634 37509656 -47928824 + AT_rich Low_complexity Low_complexity 1 22 -34 2282 95 0 3 chr17 37509656 37509952 -47928528 + AluY SINE Alu 1 295 -16 25 53 0 18 chr17 37509952 37509986 -47928494 + AT_rich Low_complexity Low_complexity 22 56 0 1347 192 0 88 chr17 37510009 37510243 -47928237 - AluJo SINE Alu -13 299 101 900 158 0 0 chr17 37510243 37510376 -47928104 + FLAM_C SINE Alu 1 133 0 1347 192 0 88 chr17 37510376 37510469 -47928011 - AluJo SINE Alu -211 101 1 2212 119 0 3 chr17 37510531 37510833 -47927647 - AluSx SINE Alu -11 301 1 516 229 15 46 chr17 37510875 37511006 -47927474 + MIR SINE MIR 120 246 -16 432 273 150 20 chr17 37511072 37511369 -47927111 + L2 LINE L2 2938 3267 -5 869 197 15 6 chr17 37511854 37512195 -47926285 + L1M4 LINE L1 4741 5165 -981 1104 114 0 18 chr17 37512202 37512369 -47926111 + AluSg/x SINE Alu 136 299 -13 1343 223 11 15 chr17 37512369 37512505 -47925975 - AluJo SINE Alu -40 272 137 2240 109 3 6 chr17 37512505 37512817 -47925663 - AluSq SINE Alu -2 311 1 1343 223 11 15 chr17 37512817 37512953 -47925527 - AluJo SINE Alu -175 137 1 766 209 0 8 chr17 37512964 37513098 -47925382 - FLAM_C SINE Alu 0 133 1 1650 139 96 4 chr17 37513463 37513743 -47924737 + AluSx SINE Alu 1 306 -6 987 186 29 6 chr17 37513751 37513923 -47924557 + AluJb SINE Alu 118 293 -19 1698 178 3 13 chr17 37513933 37514237 -47924243 + AluJo SINE Alu 3 303 -9 1670 180 39 0 chr17 37514545 37514828 -47923652 + AluJb SINE Alu 1 294 -18 697 61 0 0 chr17 37515522 37515604 -47922876 + AluY SINE Alu 213 294 -17 1521 194 10 14 chr17 37515711 37515848 -47922632 + AluJb SINE Alu 1 137 -175 2433 77 0 0 chr17 37515848 37516146 -47922334 + AluY SINE Alu 1 298 -13 1521 194 10 14 chr17 37516146 37516297 -47922183 + AluJb SINE Alu 137 288 -24 1480 154 32 83 chr17 37516619 37516794 -47921686 - AluJo SINE Alu -16 296 142 2355 82 0 0 chr17 37516794 37517075 -47921405 - AluSx SINE Alu -31 281 1 1480 154 32 83 chr17 37517075 37517211 -47921269 - AluJo SINE Alu -170 142 1 645 111 0 44 chr17 37518196 37518286 -47920194 + AluS SINE Alu 5 90 -222 2111 133 3 0 chr17 37518404 37518705 -47919775 - AluSx SINE Alu -10 302 1 2313 67 0 7 chr17 37518710 37519021 -47919459 - AluY SINE Alu 0 309 1 21 0 0 0 chr17 37519769 37519790 -47918690 + AT_rich Low_complexity Low_complexity 1 21 0 1678 180 24 7 chr17 37519790 37520084 -47918396 - AluJo SINE Alu -13 299 1 1398 177 21 43 chr17 37520124 37520406 -47918074 + AluJb SINE Alu 25 300 -12 32 0 0 0 chr17 37520415 37520447 -47918033 + AT_rich Low_complexity Low_complexity 1 32 0 2116 137 0 3 chr17 37520484 37520777 -47917703 + AluSx SINE Alu 1 292 -20 346 217 0 0 chr17 37520781 37520841 -47917639 + AluJ/FLAM SINE Alu 1 60 -242 408 223 57 109 chr17 37520843 37521018 -47917462 - MER21B LTR ERV1 -425 438 273 556 104 13 0 chr17 37521033 37521110 -47917370 - MADE1 DNA Mariner 0 80 3 402 240 31 31 chr17 37521116 37521212 -47917268 - MER21B LTR ERV1 -767 96 1 23 33 0 0 chr17 37521242 37521272 -47917208 + AT_rich Low_complexity Low_complexity 1 30 0 2443 81 0 0 chr17 37521933 37522242 -47916238 - AluY SINE Alu -2 309 1 498 250 247 30 chr17 37522475 37522714 -47915766 + L1MC4a LINE L1 5643 5829 -1979 198 0 0 0 chr17 37522714 37522736 -47915744 + (TA)n Simple_repeat Simple_repeat 2 23 0 498 250 247 30 chr17 37522736 37522824 -47915656 + L1MC4a LINE L1 5829 6041 -1767 1842 143 43 0 chr17 37522966 37523246 -47915234 + AluSx SINE Alu 1 292 -20 867 181 66 72 chr17 37523304 37523540 -47914940 - L1MC5 LINE L1 -36 7925 7690 1621 119 171 8 chr17 37523540 37523791 -47914689 - AluSg SINE Alu -8 292 1 867 181 66 72 chr17 37523791 37523874 -47914606 - L1MC5 LINE L1 -271 7690 7608 1537 152 65 35 chr17 37523954 37524244 -47914236 + AluJb SINE Alu 1 299 -13 872 171 0 0 chr17 37524247 37524376 -47914104 + FLAM_C SINE Alu 2 130 -3 750 304 100 66 chr17 37524383 37524998 -47913482 + L1M4 LINE L1 35 628 -5768 2377 94 0 3 chr17 37524998 37525295 -47913185 + AluSx SINE Alu 1 296 -16 750 304 100 66 chr17 37525295 37525428 -47913052 + L1M4 LINE L1 628 755 -5641 2438 76 0 7 chr17 37525428 37525729 -47912751 + AluSx SINE Alu 1 299 -13 750 304 100 66 chr17 37525729 37525799 -47912681 + L1M4 LINE L1 755 882 -5514 632 110 40 20 chr17 37525802 37525902 -47912578 + AluSp/q SINE Alu 204 305 -8 1002 191 12 0 chr17 37525963 37526125 -47912355 + FAM SINE Alu 1 164 -11 246 235 87 17 chr17 37526191 37526306 -47912174 + L1M4 LINE L1 2339 2461 -3754 1462 244 46 87 chr17 37526328 37526786 -47911694 + L1M4 LINE L1 2639 3115 -3100 2223 127 0 3 chr17 37526786 37527094 -47911386 + AluSx SINE Alu 1 307 -5 1462 244 46 87 chr17 37527094 37527261 -47911219 + L1M4 LINE L1 3115 3233 -2982 2467 54 3 0 chr17 37527261 37527556 -47910924 + AluY SINE Alu 1 296 -15 1462 244 46 87 chr17 37527556 37527650 -47910830 + L1M4 LINE L1 3233 3329 -2886 1762 181 7 0 chr17 37527658 37527946 -47910534 + AluJo SINE Alu 1 290 -22 1171 270 56 74 chr17 37527970 37528492 -47909988 + L1M4 LINE L1 4051 4581 -1634 2257 114 0 13 chr17 37528492 37528808 -47909672 - AluSx SINE Alu 0 312 1 1171 270 56 74 chr17 37528808 37528851 -47909629 + L1M4 LINE L1 4581 4623 -1592 1585 177 41 10 chr17 37528851 37529145 -47909335 - AluJb SINE Alu -9 303 1 1171 270 56 74 chr17 37529145 37529455 -47909025 + L1M4 LINE L1 4623 4911 -1304 272 194 16 0 chr17 37529456 37529518 -47908962 + L1M4 LINE L1 5181 5243 -972 2108 111 17 3 chr17 37529519 37529807 -47908673 + AluSg SINE Alu 2 293 -17 22 0 0 0 chr17 37529876 37529898 -47908582 + AT_rich Low_complexity Low_complexity 1 22 0 490 268 0 51 chr17 37529906 37530044 -47908436 + FLAM_A SINE Alu 1 131 -2 1839 214 29 10 chr17 37530046 37530253 -47908227 + L1M4 LINE L1 5257 5459 -788 2113 107 20 20 chr17 37530253 37530552 -47907928 + AluSx SINE Alu 3 301 -11 1839 214 29 10 chr17 37530552 37530816 -47907664 + L1M4 LINE L1 5459 5736 -511 1690 182 26 16 chr17 37530816 37531123 -47907357 + AluJo SINE Alu 1 310 -2 1839 214 29 10 chr17 37531123 37531144 -47907336 + L1M4 LINE L1 5736 5755 -492 487 206 128 111 chr17 37531136 37531310 -47907170 + L1MC5 LINE L1 7510 7679 -282 * 2393 88 0 3 chr17 37531310 37531615 -47906865 + AluSg SINE Alu 1 304 -6 487 206 128 111 chr17 37531615 37531712 -47906768 + L1MC5 LINE L1 7679 7773 -188 1969 102 4 0 chr17 37531712 37531966 -47906514 - AluSq SINE Alu -20 293 39 487 206 128 111 chr17 37531966 37532006 -47906474 + L1MC5 LINE L1 7773 7811 -150 1799 161 10 3 chr17 37532006 37532297 -47906183 + AluSx SINE Alu 1 293 -19 487 206 128 111 chr17 37532297 37532380 -47906100 + L1MC5 LINE L1 7811 7913 -48 25 51 0 0 chr17 37533076 37533115 -47905365 + AT_rich Low_complexity Low_complexity 1 39 0 1635 139 121 4 chr17 37533317 37533590 -47904890 + AluSg1 SINE Alu 1 305 -4 285 281 0 24 chr17 37533723 37533805 -47904675 + MER116 DNA Mariner 1 80 0 1965 142 0 10 chr17 37533837 37534132 -47904348 + AluJo SINE Alu 1 292 -20 902 144 0 0 chr17 37534953 37535092 -47903388 + AluJb SINE Alu 169 307 -5 1052 157 92 5 chr17 37535092 37535277 -47903203 + MER46A DNA MER2_type 34 234 -2 1875 168 3 0 chr17 37537457 37537749 -47900731 + AluJb SINE Alu 1 293 -19 762 181 62 28 chr17 37537918 37538093 -47900387 - AluSg/x SINE Alu 0 312 133 2159 109 3 10 chr17 37538095 37538261 -47900219 - AluSx SINE Alu -12 300 135 1660 86 0 14 chr17 37538261 37538482 -47899998 - AluSg/x SINE Alu -11 301 84 2159 109 3 10 chr17 37538482 37538609 -47899871 - AluSx SINE Alu -177 135 9 1679 167 25 7 chr17 37538619 37538901 -47899579 - AluJb SINE Alu -25 287 1 1765 160 7 10 chr17 37539001 37539289 -47899191 - AluJo SINE Alu -15 297 11 1975 103 37 0 chr17 37539352 37539644 -47898836 - AluSx SINE Alu 0 302 1 2296 106 0 3 chr17 37539671 37539972 -47898508 + AluSx SINE Alu 1 300 -12 1992 124 0 0 chr17 37540095 37540368 -47898112 + AluSx SINE Alu 21 293 -19 214 192 13 39 chr17 37540395 37540473 -47898007 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 2191 121 13 3 chr17 37540739 37541044 -47897436 - AluSp SINE Alu -5 308 1 667 183 0 56 chr17 37541573 37541699 -47896781 - FLAM_A SINE Alu -9 133 15 411 58 0 0 chr17 37541814 37541866 -47896614 + Alu SINE Alu 2 52 -260 2168 80 0 0 chr17 37541866 37542130 -47896350 - AluSg SINE Alu -46 264 1 441 134 8 55 chr17 37542137 37542264 -47896216 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 1728 140 104 0 chr17 37542275 37542554 -47895926 - AluSx SINE Alu -4 308 1 1946 121 29 21 chr17 37542809 37543117 -47895363 + AluSx SINE Alu 1 310 0 490 179 236 0 chr17 37544035 37544141 -47894339 - FLAM_C SINE Alu -11 132 2 481 198 0 21 chr17 37544177 37544273 -47894207 - AluJo SINE Alu -92 220 127 598 220 47 112 chr17 37544307 37544344 -47894136 - MIR SINE MIR -38 224 186 1852 167 0 3 chr17 37544344 37544632 -47893848 + AluJo SINE Alu 1 287 -25 598 220 47 112 chr17 37544632 37544683 -47893797 - MIR SINE MIR -76 186 133 2313 89 21 0 chr17 37544683 37544974 -47893506 - AluSg SINE Alu -13 297 1 598 220 47 112 chr17 37544974 37545098 -47893382 - MIR SINE MIR -129 133 25 1949 118 89 0 chr17 37545204 37545484 -47892996 + AluSx SINE Alu 1 305 -7 1974 148 30 10 chr17 37545786 37546091 -47892389 - AluSx SINE Alu -1 311 1 2258 100 0 3 chr17 37546115 37546406 -47892074 - AluSc SINE Alu -17 292 3 784 159 0 0 chr17 37546420 37546546 -47891934 - FLAM_C SINE Alu -7 126 1 2581 71 0 0 chr17 37546888 37547196 -47891284 - AluSx SINE Alu -4 308 1 2270 108 0 10 chr17 37547950 37548246 -47890234 - AluSx SINE Alu -15 297 5 22 56 0 0 chr17 37548449 37548485 -47889995 + AT_rich Low_complexity Low_complexity 1 36 0 1748 168 49 7 chr17 37548598 37548714 -47889766 + AluJo SINE Alu 3 113 -199 2398 88 10 0 chr17 37548714 37549019 -47889461 + AluSp SINE Alu 1 308 -5 2602 60 0 13 chr17 37549019 37549334 -47889146 + AluY SINE Alu 1 311 0 1748 168 49 7 chr17 37549334 37549502 -47888978 + AluJo SINE Alu 112 300 -12 2146 125 0 10 chr17 37550126 37550431 -47888049 - AluSq SINE Alu 0 313 12 514 193 18 105 chr17 37551156 37551226 -47887254 - AluJo/FRAM SINE Alu -22 290 215 2141 118 6 29 chr17 37551226 37551541 -47886939 - AluSx SINE Alu -4 308 1 514 193 18 105 chr17 37551541 37551641 -47886839 - AluJo/FRAM SINE Alu -97 215 135 1875 114 100 7 chr17 37551865 37551994 -47886486 + AluSx SINE Alu 1 117 -195 2291 120 7 0 chr17 37551994 37552295 -47886185 + AluSx SINE Alu 3 305 -7 1875 114 100 7 chr17 37552295 37552446 -47886034 + AluSx SINE Alu 117 307 -5 1220 195 17 30 chr17 37552474 37552710 -47885770 + AluJo SINE Alu 9 241 -71 1380 160 30 63 chr17 37552726 37552995 -47885485 + AluJo SINE Alu 37 296 -16 1711 165 6 47 chr17 37554794 37554980 -47883500 - AluJo SINE Alu -4 308 139 1803 167 7 3 chr17 37554980 37555279 -47883201 - AluJb SINE Alu -12 300 1 1711 165 6 47 chr17 37555279 37555413 -47883067 - AluJo SINE Alu -173 139 1 2441 79 0 13 chr17 37555491 37555795 -47882685 - AluY SINE Alu -11 300 1 1941 113 4 0 chr17 37555931 37556187 -47882293 + AluSq SINE Alu 1 257 -56 393 86 17 0 chr17 37556287 37556345 -47882135 + AluSq SINE Alu 233 291 -12 698 47 0 0 chr17 37556621 37556707 -47881773 + AluSq/x SINE Alu 54 139 -174 1133 54 0 0 chr17 37556707 37556836 -47881644 - AluY SINE Alu -182 129 1 29 60 0 0 chr17 37558000 37558050 -47880430 + AT_rich Low_complexity Low_complexity 1 50 0 2335 102 10 3 chr17 37558630 37558935 -47879545 - AluSx SINE Alu -5 307 1 777 134 0 0 chr17 37559300 37559454 -47879026 - FLAM_A SINE Alu 0 154 1 26 30 0 0 chr17 37559580 37559613 -47878867 + AT_rich Low_complexity Low_complexity 1 33 0 1967 98 8 0 chr17 37561405 37561661 -47876819 + AluSg1 SINE Alu 51 308 -1 2229 141 0 0 chr17 37562292 37562598 -47875882 - AluSx SINE Alu -6 306 1 2081 90 61 0 chr17 37562797 37563075 -47875405 - AluSp SINE Alu -18 295 1 2304 87 7 0 chr17 37563179 37563479 -47875001 - AluY SINE Alu -9 302 1 1635 132 48 58 chr17 37563557 37563852 -47874628 - AluJo SINE Alu -20 292 1 296 243 29 0 chr17 37564367 37564437 -47874043 + L2 LINE L2 3241 3312 -1 243 234 64 32 chr17 37564484 37564578 -47873902 + MIR SINE MIR 33 129 -79 363 23 0 0 chr17 37564636 37564680 -47873800 + (CA)n Simple_repeat Simple_repeat 2 45 0 2340 81 37 7 chr17 37564764 37565062 -47873418 + AluSq SINE Alu 5 311 -2 2413 98 0 0 chr17 37566475 37566782 -47871698 + AluSx SINE Alu 1 307 -5 202 323 83 10 chr17 37567684 37567780 -47870700 + MIR3 SINE MIR 10 112 -96 2383 100 0 3 chr17 37568866 37569175 -47869305 + AluSx SINE Alu 1 308 -4 347 336 94 0 chr17 37570931 37571080 -47867400 - MIR SINE MIR -19 243 81 * 396 340 7 14 chr17 37571078 37571225 -47867255 - MIR3 SINE MIR -43 165 20 185 274 14 55 chr17 37572256 37572329 -47866151 + MIR3 SINE MIR 99 168 -40 2329 103 0 13 chr17 37572415 37572727 -47865753 - AluSx SINE Alu -4 308 1 842 215 0 11 chr17 37572736 37572913 -47865567 - FAM SINE Alu 0 175 1 1989 143 3 16 chr17 37573398 37573705 -47864775 - AluJb SINE Alu -9 303 1 191 220 20 0 chr17 37573814 37573864 -47864616 + MIR SINE MIR 85 135 -73 2141 110 21 0 chr17 37573981 37574271 -47864209 - AluSp SINE Alu -17 296 1 1329 114 81 76 chr17 37574516 37574608 -47863872 + AluSx SINE Alu 49 139 -173 3013 9 0 0 chr17 37574608 37574926 -47863554 + AluYb8 SINE Alu 1 318 0 1329 114 81 76 chr17 37574926 37575069 -47863411 + AluSx SINE Alu 139 285 -27 2142 116 14 0 chr17 37575387 37575681 -47862799 + AluSx SINE Alu 1 298 -14 2049 131 14 0 chr17 37576645 37576935 -47861545 + AluSx SINE Alu 1 294 -18 2414 105 0 0 chr17 37576971 37577277 -47861203 + AluY SINE Alu 1 306 -5 216 206 127 0 chr17 37577551 37577614 -47860866 - MIR SINE MIR -66 196 126 615 192 33 0 chr17 37578343 37578463 -47860017 - FLAM_A SINE Alu -9 124 1 2192 138 3 0 chr17 37578580 37578885 -47859595 + AluSx SINE Alu 1 306 -6 1042 142 31 0 chr17 37578889 37579051 -47859429 + AluSg/x SINE Alu 129 295 -15 23 0 0 0 chr17 37580796 37580819 -47857661 + AT_rich Low_complexity Low_complexity 1 23 0 2570 67 0 0 chr17 37580820 37581117 -47857363 + AluSx SINE Alu 1 297 -15 271 252 65 59 chr17 37581800 37581958 -47856522 - MIR SINE MIR -55 153 29 239 217 17 61 chr17 37582684 37582826 -47855654 + G-rich Low_complexity Low_complexity 1 135 0 201 163 0 61 chr17 37583620 37583669 -47854811 + C-rich Low_complexity Low_complexity 3 48 0 399 298 0 0 chr17 37587129 37587414 -47851066 + (TG)n Simple_repeat Simple_repeat 1 285 0 2339 80 0 0 chr17 37589229 37589529 -47848951 - AluY SINE Alu -11 300 1 271 250 193 57 chr17 37589530 37589706 -47848774 + MIR SINE MIR 63 262 0 2114 125 0 0 chr17 37589724 37590028 -47848452 + AluSx SINE Alu 1 304 -8 1698 145 76 0 chr17 37590036 37590312 -47848168 - AluJo SINE Alu -15 297 1 2197 88 0 19 chr17 37590314 37590622 -47847858 - AluSg SINE Alu -8 302 1 2126 100 4 0 chr17 37590654 37590957 -47847523 + AluSp SINE Alu 1 304 0 417 189 256 0 chr17 37590957 37591047 -47847433 - AluJo/FLAM SINE Alu -188 114 2 2171 113 0 0 chr17 37591050 37591369 -47847111 - AluSg SINE Alu 0 319 1 2072 123 3 3 chr17 37591389 37591691 -47846789 - AluSq SINE Alu -11 302 1 1930 128 10 3 chr17 37591868 37592156 -47846324 - AluSg SINE Alu -18 292 3 1656 126 49 8 chr17 37592158 37592405 -47846075 - AluSg SINE Alu -19 291 35 1984 131 3 0 chr17 37592417 37592720 -47845760 - AluSx SINE Alu 0 304 1 377 229 29 67 chr17 37592991 37593179 -47845301 + MIR SINE MIR 3 185 -58 243 267 0 35 chr17 37595195 37595281 -47843199 + CT-rich Low_complexity Low_complexity 3 85 0 288 312 108 45 chr17 37596759 37596937 -47841543 + MIR SINE MIR 13 200 -62 1289 175 13 0 chr17 37597091 37597319 -47841161 - AluJo SINE Alu -1 311 81 237 279 87 10 chr17 37597572 37597676 -47840804 + MIR SINE MIR 74 185 -77 2159 75 0 11 chr17 37597703 37598033 -47840447 - AluSc SINE Alu 0 327 1 1929 105 10 46 chr17 37598115 37598273 -47840207 - AluSx SINE Alu -18 294 151 2179 111 3 0 chr17 37598273 37598571 -47839909 - AluSg SINE Alu -11 299 1 1929 105 10 46 chr17 37598571 37598717 -47839763 - AluSx SINE Alu -161 151 1 256 252 19 28 chr17 37598717 37598824 -47839656 + MIR SINE MIR 101 206 -56 633 216 111 40 chr17 37598869 37599058 -47839422 + MIR SINE MIR 16 221 -41 1972 138 0 0 chr17 37599058 37599371 -47839109 + AluSx SINE Alu 1 312 0 676 244 108 79 chr17 37599415 37599575 -47838905 - L1MC4 LINE L1 0 8042 7888 930 129 0 0 chr17 37599575 37599707 -47838773 + FLAM_C SINE Alu 2 133 0 676 244 108 79 chr17 37599707 37599762 -47838718 - L1MC4 LINE L1 -154 7888 7836 2217 120 0 16 chr17 37599762 37600079 -47838401 - AluSx SINE Alu 0 312 1 676 244 108 79 chr17 37600079 37600175 -47838305 - L1MC4 LINE L1 -206 7836 7744 1944 127 10 7 chr17 37600175 37600466 -47838014 - AluSq SINE Alu -16 297 6 676 244 108 79 chr17 37600466 37600535 -47837945 - L1MC4 LINE L1 -298 7744 7678 1993 123 0 33 chr17 37600535 37600835 -47837645 - AluSx SINE Alu -22 290 1 2259 89 30 0 chr17 37600843 37601145 -47837335 - AluY SINE Alu 0 311 1 2158 99 41 0 chr17 37601146 37601440 -47837040 - AluY SINE Alu -5 306 1 676 244 108 79 chr17 37601440 37601602 -47836878 - L1MC4 LINE L1 -369 7673 7470 405 313 46 0 chr17 37601612 37601743 -47836737 + MIR SINE MIR 126 262 0 1668 156 29 19 chr17 37601769 37602076 -47836404 + AluJo SINE Alu 1 310 -2 377 308 113 22 chr17 37602584 37602769 -47835711 + MIR3 SINE MIR 4 205 -3 398 233 67 17 chr17 37604015 37604135 -47834345 - MIR3 SINE MIR -49 159 34 2199 79 38 7 chr17 37607291 37607583 -47830897 - AluSq SINE Alu -8 305 5 381 22 0 0 chr17 37607667 37607713 -47830767 + (TG)n Simple_repeat Simple_repeat 2 47 0 272 234 64 32 chr17 37607771 37607865 -47830615 - MIR SINE MIR -79 129 33 339 294 221 36 chr17 37607912 37608188 -47830292 - L2 LINE L2 -1 3271 2945 329 355 147 37 chr17 37608251 37608497 -47829983 - L2 LINE L2 -494 2820 2602 1535 144 45 55 chr17 37608497 37608809 -47829671 + AluJo SINE Alu 1 309 -3 329 355 147 37 chr17 37608809 37608870 -47829610 - L2 LINE L2 -712 2602 2549 2335 85 7 0 chr17 37608870 37609177 -47829303 + AluSg SINE Alu 1 309 -1 329 355 147 37 chr17 37609177 37609190 -47829290 - L2 LINE L2 -765 2549 2539 2156 107 27 0 chr17 37609190 37609490 -47828990 + AluSx SINE Alu 1 308 -4 329 355 147 37 chr17 37609490 37609627 -47828853 - L2 LINE L2 -775 2539 2418 2055 136 7 0 chr17 37609627 37609936 -47828544 + AluSx SINE Alu 1 311 -1 329 355 147 37 chr17 37609936 37609993 -47828487 - L2 LINE L2 -896 2418 2246 249 295 171 31 chr17 37610018 37610147 -47828333 - MIR SINE MIR -108 154 8 2230 113 0 0 chr17 37610277 37610587 -47827893 + AluSx SINE Alu 3 312 0 1775 104 30 190 chr17 37611027 37611348 -47827132 - LTR12 LTR ERV1 -234 1946 1575 2427 81 0 0 chr17 37611348 37611658 -47826822 - AluSg SINE Alu 0 310 1 1775 104 30 190 chr17 37611658 37611906 -47826574 - LTR12 LTR ERV1 -605 1575 55 234 250 0 0 chr17 37611906 37611958 -47826522 - LTR30 LTR ERV1 -670 52 1 209 390 0 0 chr17 37612024 37612083 -47826397 + L2 LINE L2 3123 3181 -91 1539 146 47 25 chr17 37612088 37612392 -47826088 + AluJb SINE Alu 5 314 0 195 42 0 0 chr17 37612455 37612479 -47826001 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 219 203 0 0 chr17 37612532 37612591 -47825889 + T-rich Low_complexity Low_complexity 1 59 0 330 337 119 24 chr17 37613130 37613668 -47824812 - L2 LINE L2 -48 3224 2606 341 250 0 0 chr17 37616150 37616218 -47822262 + MER5A DNA MER1_type 4 71 -118 944 61 0 38 chr17 37616223 37616354 -47822126 + AluSq/x SINE Alu 1 126 -186 252 0 0 0 chr17 37616354 37616382 -47822098 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1972 105 0 11 chr17 37616384 37616661 -47821819 + AluSx SINE Alu 1 274 -38 645 116 0 0 chr17 37616661 37616756 -47821724 + AluSg/x SINE Alu 212 306 -3 1625 139 75 0 chr17 37616760 37617112 -47821368 + AluSx SINE Alu 1 312 0 250 299 264 0 chr17 37617113 37617200 -47821280 + MER5A DNA MER1_type 74 183 -6 832 119 0 77 chr17 37617200 37617343 -47821137 + FLAM_C SINE Alu 1 132 -1 212 264 104 28 chr17 37617373 37617479 -47821001 + L2 LINE L2 3139 3252 -20 266 325 13 0 chr17 37617777 37617854 -47820626 + MIR SINE MIR 79 156 -106 2135 96 0 4 chr17 37617862 37618143 -47820337 + AluSx SINE Alu 12 291 -21 782 262 0 24 chr17 37618385 37618595 -47819885 + MIR SINE MIR 33 237 -25 2139 109 7 13 chr17 37618636 37618940 -47819540 + AluSx SINE Alu 1 302 -10 221 226 38 0 chr17 37619218 37619271 -47819209 + MIR SINE MIR 75 129 -133 519 297 13 13 chr17 37619361 37619516 -47818964 + MIR SINE MIR 29 183 -79 743 279 48 15 chr17 37620028 37620102 -47818378 - L2 LINE L2 -82 3231 3161 2129 110 33 3 chr17 37620102 37620401 -47818079 - AluSq SINE Alu -5 308 1 743 279 48 15 chr17 37620401 37620595 -47817885 - L2 LINE L2 -152 3161 2954 183 259 129 12 chr17 37620594 37620679 -47817801 + MIR SINE MIR 97 191 -71 * 815 202 29 12 chr17 37620682 37620855 -47817625 - L2 LINE L2 -3 3310 3135 2371 90 0 0 chr17 37620855 37621167 -47817313 + AluSp SINE Alu 1 312 -1 1387 172 0 23 chr17 37621176 37621432 -47817048 + AluJo SINE Alu 63 312 0 743 197 0 7 chr17 37621480 37621617 -47816863 + FLAM_A SINE Alu 6 141 -1 198 291 29 29 chr17 37621635 37621738 -47816742 - L2 LINE L2 -229 3084 2982 1886 143 3 13 chr17 37621819 37622120 -47816360 - AluJb SINE Alu -13 299 2 554 117 0 11 chr17 37622256 37622350 -47816130 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 2139 62 0 18 chr17 37622364 37622640 -47815840 - AluY SINE Alu -40 271 1 2283 93 3 0 chr17 37622642 37622944 -47815536 - AluSp SINE Alu -10 303 1 285 287 33 57 chr17 37622944 37623066 -47815414 - L2 LINE L2 -11 3261 3143 388 296 90 64 chr17 37623162 37623395 -47815085 + L2 LINE L2 3030 3268 -4 2118 118 10 0 chr17 37623930 37624235 -47814245 + AluSx SINE Alu 1 308 -4 1280 102 0 0 chr17 37624235 37624412 -47814068 + AluSg/x SINE Alu 134 310 -2 2170 66 16 20 chr17 37624800 37625103 -47813377 - AluSc SINE Alu -7 302 1 2411 41 7 0 chr17 37625398 37625690 -47812790 - AluY SINE Alu -17 294 1 629 41 0 0 chr17 37625889 37625962 -47812518 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 629 41 0 0 chr17 37626646 37626719 -47811761 + tRNA-Cys-TGC tRNA tRNA 1 73 -2 601 158 189 0 chr17 37626839 37626966 -47811514 + MER5A DNA MER1_type 1 151 -38 708 108 10 0 chr17 37626968 37627070 -47811410 + FRAM SINE Alu 59 161 -15 414 0 0 0 chr17 37627071 37627117 -47811363 + (CA)n Simple_repeat Simple_repeat 2 47 0 243 88 0 0 chr17 37627647 37627681 -47810799 + (T)n Simple_repeat Simple_repeat 1 34 0 360 244 28 39 chr17 37628743 37628923 -47809557 + C-rich Low_complexity Low_complexity 3 180 0 502 240 62 8 chr17 37630291 37630420 -47808060 + MIR SINE MIR 18 153 -55 227 316 13 0 chr17 37630856 37630935 -47807545 + L3b LINE CR1 1296 1375 -208 193 262 184 39 chr17 37631481 37631584 -47806896 + MIR SINE MIR 30 147 -61 797 158 0 0 chr17 37631590 37631710 -47806770 + FLAM_C SINE Alu 3 122 -21 1116 66 0 0 chr17 37631717 37631854 -47806626 + AluSx SINE Alu 1 137 -175 22 35 0 0 chr17 37631868 37631897 -47806583 + AT_rich Low_complexity Low_complexity 1 29 0 1194 132 11 0 chr17 37631899 37632081 -47806399 + AluSx SINE Alu 127 310 0 798 184 40 33 chr17 37632084 37632236 -47806244 + AluJo/FRAM SINE Alu 137 289 -13 293 269 289 29 chr17 37632399 37632641 -47805839 + L2 LINE L2 2976 3280 -33 186 103 0 0 chr17 37632650 37632679 -47805801 + (TGAG)n Simple_repeat Simple_repeat 1 29 0 270 136 0 0 chr17 37632752 37632796 -47805684 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 717 159 98 54 chr17 37632980 37633196 -47805284 - LTR26E LTR ERV1 0 622 344 2443 75 0 7 chr17 37633196 37633503 -47804977 + AluSg SINE Alu 1 305 -5 717 159 98 54 chr17 37633503 37633571 -47804909 - LTR26E LTR ERV1 -278 344 280 1223 131 0 0 chr17 37633574 37633750 -47804730 - FRAM SINE Alu -8 168 1 38 0 0 0 chr17 37633750 37633788 -47804692 + AT_rich Low_complexity Low_complexity 1 38 0 1269 187 127 26 chr17 37633790 37634057 -47804423 - AluJo SINE Alu -8 294 1 2118 128 0 0 chr17 37634081 37634385 -47804095 + AluSx SINE Alu 1 304 -8 706 94 0 0 chr17 37634385 37634481 -47803999 - LTR26E LTR ERV1 -526 96 1 437 335 54 10 chr17 37634518 37634721 -47803759 - MIR SINE MIR -48 214 3 201 175 0 0 chr17 37634794 37634834 -47803646 + C-rich Low_complexity Low_complexity 4 43 0 930 252 46 0 chr17 37635350 37635588 -47802892 + MIR SINE MIR 14 262 0 310 314 15 57 chr17 37636086 37636313 -47802167 - MIR SINE MIR -25 237 20 2303 94 3 0 chr17 37637287 37637596 -47800884 - AluSq SINE Alu -3 310 1 1708 159 0 43 chr17 37637618 37637920 -47800560 + AluJb SINE Alu 1 289 -23 481 318 35 6 chr17 37638016 37638189 -47800291 - MER117 DNA MER1_type -16 181 4 916 163 0 65 chr17 37638257 37638441 -47800039 + MER20 DNA MER1_type 16 187 -32 4566 144 43 28 chr17 37638443 37639119 -47799361 + L1MB3 LINE L1 5305 5998 -185 1724 172 3 13 chr17 37639119 37639422 -47799058 + AluJo SINE Alu 1 300 -12 4566 144 43 28 chr17 37639422 37639610 -47798870 + L1MB3 LINE L1 5998 6182 -1 345 100 20 0 chr17 37639616 37639666 -47798814 + MER20 DNA MER1_type 169 219 0 639 170 16 129 chr17 37639769 37639847 -47798633 + MER5B DNA MER1_type 1 86 -92 2411 69 0 0 chr17 37639847 37640151 -47798329 + AluY SINE Alu 1 304 -7 639 170 16 129 chr17 37640151 37640247 -47798233 + MER5B DNA MER1_type 86 153 -25 409 326 122 13 chr17 37640247 37640477 -47798003 + MIR SINE MIR 4 258 -4 244 260 0 21 chr17 37641495 37641591 -47796889 + (TG)n Simple_repeat Simple_repeat 1 94 0 21 0 0 0 chr17 37641664 37641685 -47796795 + AT_rich Low_complexity Low_complexity 1 21 0 2603 270 91 64 chr17 37641688 37642216 -47796264 - HAL1 LINE L1 -6 2501 1989 1527 188 33 10 chr17 37642216 37642520 -47795960 + AluJb SINE Alu 1 311 -1 2603 270 91 64 chr17 37642520 37642874 -47795606 - HAL1 LINE L1 -518 1989 1646 2075 111 0 14 chr17 37642874 37643171 -47795309 - AluSx SINE Alu -11 301 9 2603 270 91 64 chr17 37643171 37643808 -47794672 - HAL1 LINE L1 -861 1646 939 225 188 62 62 chr17 37643823 37643903 -47794577 + MER96B DNA MER1_type? 182 261 -156 921 104 0 8 chr17 37643903 37644037 -47794443 + FLAM_C SINE Alu 1 133 -10 714 181 19 25 chr17 37644039 37644199 -47794281 + MER96B DNA MER1_type? 257 415 -2 244 324 81 36 chr17 37644593 37644658 -47793822 + MER5A DNA MER1_type 68 141 -48 180 0 0 0 chr17 37644658 37644678 -47793802 + (TTG)n Simple_repeat Simple_repeat 2 21 0 244 324 81 36 chr17 37644678 37644723 -47793757 + MER5A DNA MER1_type 141 183 -6 2087 113 3 7 chr17 37644755 37645057 -47793423 - AluSx SINE Alu -11 301 1 578 338 92 36 chr17 37645264 37645764 -47792716 + L3 LINE CR1 705 1232 -345 2001 144 3 3 chr17 37645796 37646108 -47792372 - AluSx SINE Alu 0 312 1 2444 68 10 0 chr17 37646168 37646476 -47792004 - AluY SINE Alu 0 311 1 304 236 16 89 chr17 37646476 37646525 -47791955 + L2 LINE L2 3115 3166 -147 1815 143 0 26 chr17 37646525 37646832 -47791648 + AluJo SINE Alu 1 299 -13 304 236 16 89 chr17 37646832 37646905 -47791575 + L2 LINE L2 3166 3228 -85 2200 117 3 0 chr17 37648801 37649110 -47789370 + AluSx SINE Alu 3 312 0 245 313 0 12 chr17 37649183 37649266 -47789214 + MIR SINE MIR 35 116 -146 3799 133 47 64 chr17 37649544 37649590 -47788890 - L1MB5 LINE L1 0 6174 6129 1936 93 25 7 chr17 37649590 37649896 -47788584 + AluSx SINE Alu 1 311 0 3799 133 47 64 chr17 37649896 37649976 -47788504 - L1MB5 LINE L1 -45 6129 6049 1966 157 0 0 chr17 37649976 37650281 -47788199 - AluJb SINE Alu -7 305 1 3799 133 47 64 chr17 37650281 37650645 -47787835 - L1MB5 LINE L1 -125 6049 5680 1033 52 0 58 chr17 37650645 37650836 -47787644 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2069 93 0 4 chr17 37650837 37651115 -47787365 - AluSc SINE Alu -32 277 1 2189 120 0 0 chr17 37651115 37651415 -47787065 - AluSx SINE Alu -11 301 2 3799 133 47 64 chr17 37651415 37651426 -47787054 - L1MB5 LINE L1 -493 5681 5671 2171 105 0 3 chr17 37651426 37651722 -47786758 - AluSg SINE Alu -14 296 2 3799 133 47 64 chr17 37651722 37651932 -47786548 - L1MB5 LINE L1 -503 5671 5468 2249 82 0 7 chr17 37651932 37652224 -47786256 + AluSq SINE Alu 1 290 -23 443 267 0 0 chr17 37652243 37652333 -47786147 - L1MC4 LINE L1 -1339 6703 6614 399 21 0 0 chr17 37652359 37652407 -47786073 + (GA)n Simple_repeat Simple_repeat 2 49 0 784 127 7 86 chr17 37652410 37652483 -47785997 - L1M4 LINE L1 -710 5464 5387 2204 64 54 10 chr17 37652483 37652778 -47785702 - AluY SINE Alu -3 308 1 784 127 7 86 chr17 37652778 37652921 -47785559 - L1M4 LINE L1 -787 5387 5271 266 253 145 0 chr17 37653228 37653311 -47785169 + MIR SINE MIR 103 197 -65 305 307 40 0 chr17 37653434 37653535 -47784945 + MER5A DNA MER1_type 2 106 -83 3296 165 39 19 chr17 37653550 37654143 -47784337 + MER6A DNA MER2_type 1 605 0 2343 87 0 0 chr17 37654180 37654480 -47784000 - AluSq SINE Alu -13 300 1 558 339 28 3 chr17 37654533 37654819 -47783661 + L1ME4a LINE L1 5654 5946 -175 1627 152 7 14 chr17 37655350 37655633 -47782847 + AluJb SINE Alu 17 297 -15 517 269 113 0 chr17 37655671 37655831 -47782649 - MIR SINE MIR -74 188 11 1798 143 3 3 chr17 37655853 37656139 -47782341 - AluJo SINE Alu -24 288 3 435 223 29 0 chr17 37656271 37656374 -47782106 - MER5A DNA MER1_type -80 109 4 266 366 41 45 chr17 37656848 37656962 -47781518 - MIR SINE MIR -2 260 147 2163 102 3 0 chr17 37656962 37657257 -47781223 + AluSq SINE Alu 1 296 -17 266 366 41 45 chr17 37657257 37657388 -47781092 - MIR SINE MIR -115 147 16 1102 271 49 49 chr17 37657909 37658045 -47780435 - MLT1J LTR MaLR -143 368 233 1931 98 91 7 chr17 37658045 37658331 -47780149 - AluSx SINE Alu -2 310 1 1791 126 8 0 chr17 37658340 37658601 -47779879 - AluSx SINE Alu -13 299 37 1102 271 49 49 chr17 37658601 37658820 -47779660 - MLT1J LTR MaLR -285 226 3 1147 265 17 17 chr17 37659017 37659311 -47779169 - MER4D LTR ERV1 -36 867 574 902 128 0 23 chr17 37659311 37659444 -47779036 + FLAM_C SINE Alu 1 130 -3 1304 98 26 41 chr17 37659458 37659693 -47778787 + AluSp SINE Alu 1 305 -8 794 141 134 47 chr17 37659696 37659845 -47778635 + AluJo SINE Alu 137 298 -4 1553 99 144 15 chr17 37660038 37660301 -47778179 + AluSg1 SINE Alu 1 297 -12 1775 107 54 4 chr17 37660320 37660600 -47777880 - MER49 LTR ERV1 -629 294 1 1821 139 3 3 chr17 37660699 37660986 -47777494 - AluJb SINE Alu -22 290 4 956 106 21 0 chr17 37660997 37661139 -47777341 - L1MA5A LINE L1 -4 6293 6149 1978 136 7 3 chr17 37661951 37662259 -47776221 + AluSq SINE Alu 4 312 -1 395 176 8 42 chr17 37662275 37662394 -47776086 + GA-rich Low_complexity Low_complexity 2 116 0 1536 156 0 41 chr17 37662701 37662971 -47775509 - AluJo SINE Alu -21 291 33 266 277 109 10 chr17 37663287 37663388 -47775092 + MLT1L LTR MaLR 372 482 -133 186 252 54 108 chr17 37664034 37664145 -47774335 - L2 LINE L2 0 3272 3168 2123 99 6 16 chr17 37664307 37664619 -47773861 - AluSx SINE Alu -3 309 1 304 278 33 11 chr17 37664620 37664710 -47773770 + MIR SINE MIR 98 189 -73 294 331 71 7 chr17 37666014 37666168 -47772312 - L2 LINE L2 -214 3058 2895 623 259 6 19 chr17 37666280 37666442 -47772038 - MLT1J LTR MaLR -131 380 221 1910 125 3 33 chr17 37666587 37666890 -47771590 - AluJb SINE Alu -14 298 5 1962 203 26 34 chr17 37667070 37667539 -47770941 - MLT1C LTR MaLR -2 465 1 1269 114 0 0 chr17 37667831 37668007 -47770473 + AluSg/x SINE Alu 137 312 0 2124 115 0 0 chr17 37668869 37669164 -47769316 + AluSx SINE Alu 1 295 -17 1942 100 60 0 chr17 37670312 37670593 -47767887 - AluSx SINE Alu -14 298 1 267 269 179 41 chr17 37672444 37672589 -47765891 + MIR SINE MIR 98 262 0 622 297 43 92 chr17 37673088 37673502 -47764978 - L2 LINE L2 -1 3271 2878 2304 96 0 6 chr17 37673502 37673816 -47764664 + AluSx SINE Alu 1 312 0 679 182 53 8 chr17 37673840 37673972 -47764508 + FLAM_C SINE Alu 1 138 -5 469 335 136 32 chr17 37674011 37674453 -47764027 - L2 LINE L2 -579 2735 2248 439 267 50 56 chr17 37674955 37675135 -47763345 + MIR3 SINE MIR 19 197 -11 217 287 74 56 chr17 37675537 37675645 -47762835 - L2 LINE L2 -5 3267 3158 1628 188 3 0 chr17 37675661 37675948 -47762532 - AluJo SINE Alu -20 292 5 564 336 55 0 chr17 37676083 37676300 -47762180 + MIR SINE MIR 3 231 -31 2369 79 0 0 chr17 37676588 37676891 -47761589 - AluSx SINE Alu -9 303 1 1176 169 49 56 chr17 37676895 37677208 -47761272 - AluJo SINE Alu 0 311 1 2043 76 4 0 chr17 37677224 37677487 -47760993 - AluY SINE Alu -15 296 33 345 24 0 0 chr17 37677704 37677746 -47760734 + (TG)n Simple_repeat Simple_repeat 2 43 0 718 331 68 18 chr17 37677770 37678096 -47760384 - L1MC4a LINE L1 -1926 5882 5541 274 283 20 20 chr17 37678194 37678293 -47760187 + MIR SINE MIR 159 257 -5 551 186 10 0 chr17 37879472 37879569 -47558911 - AluSg/x SINE Alu -77 233 136 1775 135 4 0 chr17 37879605 37879872 -47558608 + AluSx SINE Alu 40 307 -5 1506 203 196 30 chr17 37879975 37880281 -47558199 + MER50 LTR ERV1 235 634 -100 2219 85 0 7 chr17 37880281 37880574 -47557906 - AluSx SINE Alu -21 291 1 1506 203 196 30 chr17 37880574 37880696 -47557784 + MER50 LTR ERV1 634 734 0 1654 167 0 8 chr17 37880696 37880960 -47557520 - AluJb SINE Alu -47 265 4 2049 124 0 10 chr17 37880979 37881277 -47557203 - AluSx SINE Alu -17 295 1 1273 89 0 11 chr17 37881781 37881960 -47556520 - AluSg/x SINE Alu -1 311 135 295 293 85 32 chr17 37882096 37882284 -47556196 - L1MC4a LINE L1 -1882 5926 5729 2144 112 0 3 chr17 37882284 37882579 -47555901 + AluSg SINE Alu 1 294 -16 2173 98 0 7 chr17 37883126 37883423 -47555057 - AluSg SINE Alu -15 295 1 1297 175 26 69 chr17 37883432 37883609 -47554871 - AluJo SINE Alu -21 291 131 2156 112 0 10 chr17 37883609 37883913 -47554567 - AluSx SINE Alu -11 301 1 1297 175 26 69 chr17 37883913 37884038 -47554442 - AluJo SINE Alu -181 131 2 240 35 0 0 chr17 37884097 37884126 -47554354 + (TTG)n Simple_repeat Simple_repeat 2 30 0 809 172 8 8 chr17 37884206 37884340 -47554140 + AluJo SINE Alu 2 135 -177 1896 136 4 0 chr17 37884358 37884638 -47553842 + AluSx SINE Alu 1 281 -31 374 222 95 8 chr17 37884857 37884983 -47553497 - L2 LINE L2 -612 2702 2566 2048 122 0 0 chr17 37885084 37885378 -47553102 - AluSx SINE Alu -18 294 1 227 348 3 26 chr17 37885532 37885665 -47552815 + MIR SINE MIR 60 146 -62 2345 95 0 0 chr17 37885716 37886022 -47552458 - AluSq SINE Alu -7 306 1 748 184 6 58 chr17 37886030 37886102 -47552378 - L1MA10 LINE L1 -1 6333 6259 2173 110 3 0 chr17 37886102 37886401 -47552079 - AluSp SINE Alu -13 300 1 748 184 6 58 chr17 37886401 37886502 -47551978 - L1MA10 LINE L1 -75 6259 6169 612 219 59 35 chr17 37886564 37886733 -47551747 - AluJo SINE Alu -17 295 123 187 153 35 49 chr17 37886967 37887111 -47551369 + C-rich Low_complexity Low_complexity 3 144 0 923 169 97 0 chr17 37887281 37887435 -47551045 - FAM SINE Alu -6 169 1 2202 102 0 3 chr17 37887441 37887745 -47550735 - AluSq SINE Alu -10 303 1 968 182 0 17 chr17 37887844 37888020 -47550460 - AluJb SINE Alu -5 307 135 2260 87 0 3 chr17 37888032 37888361 -47550119 - AluSq SINE Alu 0 313 1 21 0 0 0 chr17 37888371 37888392 -47550088 + AT_rich Low_complexity Low_complexity 1 21 0 1646 173 35 0 chr17 37888668 37888951 -47549529 - AluJo SINE Alu -19 293 1 246 160 0 0 chr17 37889022 37889072 -47549408 + T-rich Low_complexity Low_complexity 1 50 0 2061 121 3 0 chr17 37889089 37889387 -47549093 - AluSx SINE Alu -12 300 2 2151 109 0 0 chr17 37889396 37889689 -47548791 - AluSg SINE Alu -17 293 1 1173 126 25 15 chr17 37889958 37890157 -47548323 - L1MD2 LINE L1 -3 6356 6156 189 0 0 0 chr17 37890161 37890182 -47548298 + (TG)n Simple_repeat Simple_repeat 1 21 0 296 333 36 16 chr17 37890437 37890624 -47547856 - MIR SINE MIR -56 206 12 787 134 0 0 chr17 37891261 37891380 -47547100 + AluSg/x SINE Alu 181 299 -11 323 193 0 143 chr17 37891381 37891436 -47547044 - L1MB8 LINE L1 -43 6135 6104 2237 103 0 0 chr17 37891436 37891736 -47546744 + AluSg SINE Alu 1 300 -10 323 193 0 143 chr17 37891736 37891799 -47546681 - L1MB8 LINE L1 -74 6104 6034 2235 69 7 3 chr17 37891809 37892097 -47546383 + AluSx SINE Alu 1 289 -23 21 0 0 0 chr17 37892097 37892118 -47546362 + AT_rich Low_complexity Low_complexity 1 21 0 1731 152 7 0 chr17 37892130 37892406 -47546074 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr17 37892406 37892427 -47546053 + (TC)n Simple_repeat Simple_repeat 2 22 0 21 0 0 0 chr17 37892427 37892448 -47546032 + AT_rich Low_complexity Low_complexity 1 21 0 810 133 8 0 chr17 37892448 37892568 -47545912 - FLAM_C SINE Alu -21 122 2 2074 127 0 0 chr17 37892737 37893037 -47545443 + AluSg SINE Alu 1 300 -10 316 191 0 32 chr17 37893037 37893100 -47545380 - L1MB8 LINE L1 -84 6094 6034 2129 102 3 7 chr17 37893110 37893405 -47545075 + AluSx SINE Alu 1 294 -18 1127 158 5 0 chr17 37893447 37893631 -47544849 + AluJo SINE Alu 3 187 -125 201 108 0 0 chr17 37893671 37893708 -47544772 + (G)n Simple_repeat Simple_repeat 1 37 0 2234 77 13 0 chr17 37894065 37894365 -47544115 - AluY SINE Alu -7 304 1 1750 129 11 31 chr17 37894373 37894533 -47543947 - AluSx SINE Alu -18 294 132 2152 118 0 3 chr17 37894533 37894838 -47543642 - AluSx SINE Alu -8 304 1 2163 112 0 10 chr17 37894841 37895155 -47543325 - AluSx SINE Alu -1 311 1 1750 129 11 31 chr17 37895155 37895277 -47543203 - AluSx SINE Alu -182 130 14 2167 84 27 0 chr17 37896447 37896744 -47541736 + AluSg SINE Alu 1 305 -5 2142 79 40 0 chr17 37899183 37899461 -47539019 + AluSc SINE Alu 1 289 -20 1025 156 6 12 chr17 37899461 37899620 -47538860 - AluJo/FRAM SINE Alu -6 296 137 1990 122 3 10 chr17 37899791 37900094 -47538386 - AluJb SINE Alu -11 301 1 203 152 65 0 chr17 37900310 37900356 -47538124 + C-rich Low_complexity Low_complexity 4 52 0 244 156 67 0 chr17 37901822 37901867 -47536613 - MIR SINE MIR -151 111 64 1770 168 0 10 chr17 37901867 37902171 -47536309 - AluJo SINE Alu -11 301 1 288 0 0 0 chr17 37902209 37902241 -47536239 + (TG)n Simple_repeat Simple_repeat 2 33 0 778 124 41 16 chr17 37902242 37902363 -47536117 - AluSg/x SINE Alu -19 291 168 183 111 28 0 chr17 37903872 37903908 -47534572 - L2 LINE L2 0 3313 3277 1947 65 91 4 chr17 37904199 37904474 -47534006 - AluSx SINE Alu -13 299 1 2137 104 3 3 chr17 37904476 37904773 -47533707 - AluSx SINE Alu -15 297 1 1614 99 5 0 chr17 37905305 37905526 -47532954 + AluSg/x SINE Alu 88 309 -1 1717 148 7 4 chr17 37905543 37905820 -47532660 + AluJb SINE Alu 14 291 -21 191 156 0 0 chr17 37905827 37905859 -47532621 + L2 LINE L2 3222 3253 -19 556 192 22 71 chr17 37906434 37906616 -47531864 + L2 LINE L2 3141 3313 0 2123 90 3 10 chr17 37906637 37906747 -47531733 + AluSx SINE Alu 26 135 -177 2032 114 3 10 chr17 37906747 37907073 -47531407 + AluSx SINE Alu 1 312 0 2123 90 3 10 chr17 37907073 37907251 -47531229 + AluSx SINE Alu 135 312 0 204 306 14 0 chr17 37907252 37907324 -47531156 + (CACG)n Simple_repeat Simple_repeat 3 75 0 347 314 101 12 chr17 37907824 37907993 -47530487 + MIR SINE MIR 4 187 -75 1221 113 11 0 chr17 37908442 37908619 -47529861 - AluSg/x SINE Alu 0 310 132 2496 46 0 3 chr17 37908619 37908923 -47529557 - AluY SINE Alu -8 303 1 1652 163 10 7 chr17 37908979 37909267 -47529213 + AluJo SINE Alu 1 289 -23 24 20 0 60 chr17 37910502 37910552 -47527928 + AT_rich Low_complexity Low_complexity 1 47 0 2091 100 31 3 chr17 37912868 37913157 -47525323 - AluSx SINE Alu -15 297 1 1819 121 0 15 chr17 37913161 37913433 -47525047 - AluSx SINE Alu -15 297 30 185 0 40 0 chr17 37913906 37913931 -47524549 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 806 191 0 0 chr17 37913937 37914078 -47524402 - FRAM SINE Alu -33 143 3 23 0 0 0 chr17 37914298 37914321 -47524159 + AT_rich Low_complexity Low_complexity 1 23 0 892 176 171 29 chr17 37914351 37914395 -47524085 + AluJo SINE Alu 1 37 -275 1547 167 188 16 chr17 37914395 37914779 -47523701 - LTR7 LTR ERV1 0 450 1 892 176 171 29 chr17 37914779 37914939 -47523541 + AluJo SINE Alu 37 234 -78 1365 154 4 17 chr17 37914939 37915009 -47523471 + AluSg/x SINE Alu 67 136 -176 1868 112 11 0 chr17 37915009 37915269 -47523211 + AluSp SINE Alu 39 301 -12 1365 154 4 17 chr17 37915269 37915431 -47523049 + AluSg/x SINE Alu 136 296 -16 504 32 0 0 chr17 37915437 37915499 -47522981 + (CA)n Simple_repeat Simple_repeat 2 63 0 450 326 148 17 chr17 37915541 37915561 -47522919 - L1ME LINE L1 -373 5748 5732 1911 134 7 3 chr17 37915561 37915853 -47522627 + AluSx SINE Alu 1 293 -19 450 326 148 17 chr17 37915853 37916068 -47522412 - L1ME LINE L1 -389 5732 5482 1057 111 0 0 chr17 37916216 37916369 -47522111 + AluSg/x SINE Alu 153 305 -5 2100 94 7 0 chr17 37916374 37916697 -47521783 + AluSq SINE Alu 1 325 0 2300 90 6 0 chr17 37916697 37917008 -47521472 + AluSp SINE Alu 1 313 0 1786 155 24 3 chr17 37917164 37917460 -47521020 - AluJb SINE Alu 0 312 11 1874 116 25 7 chr17 37917514 37917790 -47520690 - AluSx SINE Alu -26 286 6 2182 91 0 3 chr17 37918519 37918833 -47519647 - AluSq SINE Alu 0 313 1 2239 92 0 0 chr17 37918836 37919129 -47519351 - AluSx SINE Alu -19 293 1 404 188 0 12 chr17 37919150 37919230 -47519250 - MIR SINE MIR -94 168 90 1842 141 28 3 chr17 37919245 37919535 -47518945 - AluSx SINE Alu -15 297 1 1726 171 10 7 chr17 37919557 37919867 -47518613 - AluJb SINE Alu -1 311 1 21 0 0 0 chr17 37919879 37919900 -47518580 + AT_rich Low_complexity Low_complexity 1 21 0 2102 101 0 0 chr17 37919900 37920187 -47518293 - AluSg SINE Alu -23 287 1 1962 136 7 0 chr17 37920676 37920986 -47517494 + AluJo SINE Alu 1 312 0 2300 84 0 3 chr17 37921258 37921556 -47516924 + AluSq SINE Alu 1 297 -16 1096 117 0 6 chr17 37921556 37921719 -47516761 + AluSg/x SINE Alu 134 295 -17 987 176 151 29 chr17 37921719 37921991 -47516489 + AluSx SINE Alu 6 310 -2 234 250 0 17 chr17 37922000 37922060 -47516420 - MIR SINE MIR -172 90 32 242 340 73 40 chr17 37922962 37923112 -47515368 + MIR SINE MIR 105 259 -3 24 0 0 0 chr17 37923689 37923713 -47514767 + GC_rich Low_complexity Low_complexity 1 24 0 1891 131 34 3 chr17 37924825 37925123 -47513357 + AluSx SINE Alu 1 307 -5 1237 182 68 44 chr17 37925132 37925279 -47513201 + AluSq SINE Alu 1 143 -160 1493 88 4 40 chr17 37925279 37925506 -47512974 + AluSq SINE Alu 1 219 -94 1237 182 68 44 chr17 37925506 37925654 -47512826 + AluSq SINE Alu 143 303 0 1335 150 72 101 chr17 37925659 37925804 -47512676 + AluJo SINE Alu 2 150 -196 227 27 0 54 chr17 37925804 37925841 -47512639 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1335 150 72 101 chr17 37925841 37926049 -47512431 + AluJo SINE Alu 150 346 0 638 192 56 0 chr17 37926060 37926185 -47512295 + FLAM_C SINE Alu 1 132 -1 1281 177 22 0 chr17 37926195 37926421 -47512059 + AluJo SINE Alu 1 231 -81 1520 138 142 4 chr17 37926425 37926604 -47511876 + AluJb SINE Alu 5 233 -69 2052 94 24 10 chr17 37926604 37926902 -47511578 + AluSc SINE Alu 1 302 -7 1520 138 142 4 chr17 37926902 37926983 -47511497 + AluJb SINE Alu 233 301 -1 470 245 94 13 chr17 37926995 37927154 -47511326 + L1MC/D LINE L1 5508 5679 -2129 407 248 0 20 chr17 37927155 37927256 -47511224 + L2 LINE L2 3212 3310 -3 863 134 8 8 chr17 37927557 37927691 -47510789 + AluSq/x SINE Alu 1 134 -179 939 138 0 69 chr17 37927946 37928073 -47510407 - AluSq SINE Alu -53 260 149 2231 80 0 3 chr17 37928073 37928359 -47510121 - AluSq SINE Alu -18 295 11 939 138 0 69 chr17 37928359 37928420 -47510060 - AluSq SINE Alu -164 149 85 286 167 0 24 chr17 37928420 37928481 -47509999 - AluSc SINE Alu -51 248 204 1528 186 0 61 chr17 37928877 37929205 -47509275 + AluJo SINE Alu 5 312 0 437 263 68 0 chr17 37929230 37929363 -47509117 + MIR SINE MIR 4 145 -117 2108 98 3 7 chr17 37929369 37929665 -47508815 + AluSp SINE Alu 3 297 -16 804 103 0 0 chr17 37929689 37929796 -47508684 + AluSc SINE Alu 176 318 0 292 28 0 0 chr17 37929796 37929832 -47508648 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1927 128 0 3 chr17 37929901 37930183 -47508297 + AluSx SINE Alu 6 286 -26 2287 74 6 10 chr17 37930543 37930855 -47507625 + AluSq SINE Alu 1 311 -2 1559 134 9 0 chr17 37930986 37931217 -47507263 - AluSx SINE Alu -74 238 6 1298 159 18 62 chr17 37931305 37931489 -47506991 - AluJb SINE Alu -14 298 128 2187 97 17 0 chr17 37931489 37931787 -47506693 - AluSx SINE Alu -9 303 1 1298 159 18 62 chr17 37931787 37931878 -47506602 - AluJb SINE Alu -184 128 35 2363 92 0 0 chr17 37932834 37933138 -47505342 + AluSg SINE Alu 1 304 -6 2070 92 0 14 chr17 37933555 37933877 -47504603 + AluSg SINE Alu 1 310 0 302 273 31 75 chr17 37935166 37935327 -47503153 + MIR SINE MIR 28 181 -81 606 160 0 0 chr17 37935332 37935426 -47503054 - FRAM SINE Alu -10 166 73 1471 79 117 0 chr17 37936332 37936546 -47501934 + AluSg/x SINE Alu 72 310 -2 243 273 250 23 chr17 37936600 37936728 -47501752 - MIR SINE MIR -92 170 14 212 228 0 63 chr17 37939221 37939300 -47499180 + (CCGGG)n Simple_repeat Simple_repeat 3 76 0 419 274 134 6 chr17 37939940 37940104 -47498376 + MIR SINE MIR 32 216 -46 200 291 36 35 chr17 37940145 37940265 -47498215 - MIR SINE MIR -61 147 74 2185 108 0 9 chr17 37940509 37940824 -47497656 + AluSx SINE Alu 1 312 0 2197 102 0 0 chr17 37940889 37941184 -47497296 + AluSx SINE Alu 1 295 -17 212 333 17 42 chr17 37941287 37941407 -47497073 - L2 LINE L2 0 3313 3197 671 157 0 10 chr17 37942037 37942139 -47496341 - AluJ/FLAM SINE Alu -210 102 2 288 0 0 0 chr17 37942178 37942210 -47496270 + (TG)n Simple_repeat Simple_repeat 2 33 0 1946 111 50 0 chr17 37942211 37942490 -47495990 - AluSx SINE Alu -19 293 1 2183 88 3 7 chr17 37942985 37943282 -47495198 + AluSx SINE Alu 1 296 -16 1951 123 3 20 chr17 37943717 37944018 -47494462 - AluSx SINE Alu -16 296 1 1367 157 134 76 chr17 37944479 37944533 -47493947 - MSTD LTR MaLR -2 394 345 1755 172 3 3 chr17 37944533 37944830 -47493650 - AluJb SINE Alu -15 297 1 1367 157 134 76 chr17 37944830 37945118 -47493362 - MSTD LTR MaLR -51 345 32 2249 107 0 3 chr17 37945259 37945567 -47492913 - AluSx SINE Alu -5 307 1 2271 94 3 3 chr17 37946066 37946375 -47492105 - AluSc SINE Alu 0 309 1 1369 222 100 14 chr17 37946971 37947332 -47491148 + L1ME3 LINE L1 5635 6026 -136 339 212 0 0 chr17 37947341 37947407 -47491073 + L1ME3 LINE L1 6067 6132 -30 306 153 0 0 chr17 37947436 37947495 -47490985 - Alu SINE Alu -1 300 242 1825 150 0 20 chr17 37947495 37947795 -47490685 + AluJb SINE Alu 6 299 -13 2139 115 3 0 chr17 37948178 37948483 -47489997 + AluSx SINE Alu 1 306 -6 920 229 44 10 chr17 37948852 37949057 -47489423 - MER58A DNA MER1_type -1 223 12 2038 95 25 0 chr17 37949467 37949790 -47488690 - AluY SINE Alu 0 311 1 1877 142 3 0 chr17 37949790 37950078 -47488402 - AluSx SINE Alu -4 308 19 1778 108 54 48 chr17 37950231 37950405 -47488075 - AluSx SINE Alu -15 297 119 2272 85 0 25 chr17 37950405 37950721 -47487759 - AluY SINE Alu -3 308 1 1778 108 54 48 chr17 37950721 37950841 -47487639 - AluSx SINE Alu -193 119 1 1434 244 158 55 chr17 37950856 37951325 -47487155 + L2 LINE L2 2120 2539 -774 1990 115 10 26 chr17 37951325 37951637 -47486843 - AluSx SINE Alu -5 307 1 1434 244 158 55 chr17 37951637 37952250 -47486230 + L2 LINE L2 2539 3309 -4 301 285 277 22 chr17 37952308 37952650 -47485830 + L2 LINE L2 2623 3048 -265 270 95 0 0 chr17 37953469 37953511 -47484969 + (CCG)n Simple_repeat Simple_repeat 2 43 0 2196 92 6 22 chr17 37953975 37954320 -47484160 - AluY SINE Alu 0 340 1 555 225 236 0 chr17 37954576 37954754 -47483726 + MIR SINE MIR 15 234 -28 1504 153 10 48 chr17 37954874 37955168 -47483312 + AluSq SINE Alu 2 284 -29 2164 89 0 7 chr17 37955941 37956244 -47482236 + AluSg SINE Alu 1 301 -9 2066 84 3 55 chr17 37956252 37956562 -47481918 + AluSc SINE Alu 1 294 -15 1486 154 117 8 chr17 37956576 37956842 -47481638 + AluSg1 SINE Alu 1 295 -14 1702 147 27 3 chr17 37956844 37957136 -47481344 + AluSx SINE Alu 1 299 -13 2288 78 0 0 chr17 37957522 37957816 -47480664 - AluY SINE Alu -17 294 1 524 220 0 0 chr17 37961157 37961266 -47477214 + FLAM_C SINE Alu 34 142 -1 2157 102 7 0 chr17 37961333 37961627 -47476853 + AluSg SINE Alu 1 296 -14 619 152 19 0 chr17 37961638 37961743 -47476737 + FLAM_C SINE Alu 2 108 -35 2098 98 0 7 chr17 37962605 37962882 -47475598 + AluSx SINE Alu 2 276 -36 2061 115 3 13 chr17 37962948 37963253 -47475227 + AluSx SINE Alu 1 302 -10 2219 85 0 13 chr17 37963264 37963570 -47474910 + AluY SINE Alu 1 302 -9 2076 118 7 0 chr17 37963589 37963885 -47474595 - AluSx SINE Alu -14 298 1 389 303 30 23 chr17 37963889 37964021 -47474459 - MIR SINE MIR -70 192 60 2037 107 0 0 chr17 37964199 37964517 -47473963 + AluSg SINE Alu 1 318 0 474 276 126 11 chr17 37965243 37965417 -47473063 + MER117 DNA MER1_type 1 194 -3 263 329 105 20 chr17 37965571 37965722 -47472758 - MIR3 SINE MIR -65 143 3 2327 83 0 3 chr17 37965746 37966058 -47472422 - AluY SINE Alu 0 311 1 190 254 284 0 chr17 37966402 37966469 -47472011 - MIR SINE MIR 0 262 177 870 218 6 0 chr17 37966471 37966641 -47471839 - AluJb SINE Alu -8 304 134 2014 136 0 3 chr17 37966641 37966949 -47471531 - AluJb SINE Alu -5 307 1 447 233 0 4 chr17 37966958 37967064 -47471416 - MIR SINE MIR -62 146 55 283 331 111 25 chr17 37967228 37967400 -47471080 + MIR SINE MIR 38 233 -29 2083 97 31 0 chr17 37967400 37967689 -47470791 + AluSq SINE Alu 1 298 -15 283 331 111 25 chr17 37967689 37967718 -47470762 + MIR SINE MIR 233 258 -4 2396 76 0 0 chr17 37968428 37968732 -47469748 - AluSg SINE Alu -6 304 1 220 260 13 26 chr17 37968812 37968889 -47469591 + L2 LINE L2 2892 2967 -305 31 0 0 0 chr17 37970236 37970267 -47468213 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr17 37971387 37971416 -47467064 + GC_rich Low_complexity Low_complexity 1 29 0 418 276 121 50 chr17 37972509 37972708 -47465772 + MIR SINE MIR 16 228 -34 1046 110 39 0 chr17 37973006 37973160 -47465320 - AluSg/x SINE Alu -19 291 132 1526 112 4 33 chr17 37973160 37973402 -47465078 - AluSg/x SINE Alu 0 312 78 1053 168 5 15 chr17 37973518 37973715 -47464765 - AluSx SINE Alu -113 199 5 2112 70 35 0 chr17 37973731 37974015 -47464465 - AluY SINE Alu -17 294 1 1064 84 7 0 chr17 37974597 37974763 -47463717 - AluSq SINE Alu 0 308 142 575 164 10 0 chr17 37974764 37974868 -47463612 + AluSg/x SINE Alu 206 310 0 1300 153 0 62 chr17 37974883 37975125 -47463355 + AluJo SINE Alu 1 227 -85 430 335 25 15 chr17 37975405 37975605 -47462875 - AluJb SINE Alu -103 209 8 1668 75 0 0 chr17 37975627 37975839 -47462641 - AluY SINE Alu -18 293 82 344 291 109 23 chr17 37975929 37976104 -47462376 + MIR SINE MIR 53 242 -20 260 196 0 0 chr17 37976658 37976709 -47461771 - MIR SINE MIR -74 134 84 1885 141 24 3 chr17 37976739 37977037 -47461443 + AluJo SINE Alu 1 304 -8 279 218 0 0 chr17 37977037 37977092 -47461388 + MER91 DNA MER1_type 142 196 0 565 184 9 18 chr17 37977508 37977622 -47460858 - AluJb SINE Alu -17 295 183 1096 180 19 14 chr17 37977666 37977739 -47460741 - AluSx SINE Alu -100 212 141 2257 86 3 3 chr17 37977739 37978040 -47460440 - AluSx SINE Alu -11 301 1 1096 180 19 14 chr17 37978040 37978177 -47460303 - AluSx SINE Alu -171 141 1 189 0 0 0 chr17 37978177 37978198 -47460282 + (T)n Simple_repeat Simple_repeat 1 21 0 995 182 56 5 chr17 37978257 37978455 -47460025 + AluJb SINE Alu 90 297 -15 754 186 0 0 chr17 37978455 37978573 -47459907 - AluJo/FLAM SINE Alu -193 119 2 1437 197 33 7 chr17 37978585 37978889 -47459591 - AluJo SINE Alu 0 312 1 1867 118 79 13 chr17 37978904 37979209 -47459271 - MER1B DNA MER1_type 0 339 15 611 214 77 73 chr17 37979401 37979472 -47459008 + L2 LINE L2 2831 2900 -372 1560 149 68 37 chr17 37979472 37979768 -47458712 - AluJo SINE Alu -7 305 1 611 214 77 73 chr17 37979768 37979944 -47458536 + L2 LINE L2 2900 3079 -193 607 191 129 45 chr17 37980029 37980070 -47458410 - MER3 DNA MER1_type -16 193 157 2300 100 3 3 chr17 37980070 37980380 -47458100 + AluSx SINE Alu 1 310 -2 607 191 129 45 chr17 37980380 37980434 -47458046 - MER3 DNA MER1_type -52 157 109 2130 77 35 7 chr17 37980434 37980720 -47457760 + AluSc SINE Alu 1 294 -15 607 191 129 45 chr17 37980720 37980801 -47457679 - MER3 DNA MER1_type -100 109 1 1226 187 76 4 chr17 37981877 37982174 -47456306 + AluSx SINE Alu 1 316 0 325 339 56 78 chr17 37983397 37983754 -47454726 - L2 LINE L2 -4 3268 2920 207 335 145 11 chr17 37983755 37983934 -47454546 - MIR SINE MIR 0 262 60 226 288 98 30 chr17 37984162 37984294 -47454186 - MIR SINE MIR -68 194 54 1831 114 40 0 chr17 37984376 37984649 -47453831 - AluSc SINE Alu -25 284 1 1659 129 13 55 chr17 37984730 37984871 -47453609 + AluSx SINE Alu 1 146 -166 2260 105 3 0 chr17 37984871 37985175 -47453305 + AluSq SINE Alu 1 305 -8 1659 129 13 55 chr17 37985175 37985342 -47453138 + AluSx SINE Alu 146 296 -16 323 185 8 46 chr17 37985373 37985503 -47452977 + GA-rich Low_complexity Low_complexity 2 126 0 1812 122 87 3 chr17 37985662 37985949 -47452531 + AluSx SINE Alu 2 312 0 2263 84 3 0 chr17 37985949 37986292 -47452188 + AluY SINE Alu 1 311 0 233 293 162 0 chr17 37986478 37986577 -47451903 - MIR SINE MIR -39 223 109 1556 149 40 53 chr17 37986931 37987097 -47451383 + MER47A DNA MER2_type 1 163 -2160 2244 89 0 3 chr17 37987097 37987399 -47451081 - AluSq SINE Alu -12 301 1 1556 149 40 53 chr17 37987399 37987553 -47450927 + MER47A DNA MER2_type 163 317 -49 883 221 67 0 chr17 37987589 37987784 -47450696 - AluJb SINE Alu -11 301 94 280 158 35 18 chr17 37987785 37987842 -47450638 + MER47A DNA MER2_type 309 366 0 2349 87 3 0 chr17 37987860 37988172 -47450308 - AluSp SINE Alu 0 313 1 388 209 19 29 chr17 37989345 37989450 -47449030 + MIR SINE MIR 30 133 -75 1001 276 99 84 chr17 37990320 37990407 -47448073 - MER115 DNA AcHobo -4 689 605 2286 94 0 10 chr17 37990407 37990714 -47447766 + AluSx SINE Alu 1 304 -8 1001 276 99 84 chr17 37990714 37991262 -47447218 - MER115 DNA AcHobo -88 605 41 2076 97 16 23 chr17 37991262 37991571 -47446909 + AluY SINE Alu 1 307 -4 1680 170 20 13 chr17 37991613 37991919 -47446561 + AluJb SINE Alu 1 308 -4 327 104 0 0 chr17 37992191 37992239 -47446241 + (TG)n Simple_repeat Simple_repeat 2 49 0 198 0 0 0 chr17 37992315 37992337 -47446143 + (TG)n Simple_repeat Simple_repeat 1 22 0 2321 88 0 3 chr17 37992403 37992711 -47445769 - AluSp SINE Alu -6 307 1 232 305 291 10 chr17 37993029 37993232 -47445248 + L3b LINE CR1 1298 1557 -26 324 0 0 0 chr17 37993580 37993616 -47444864 + (CA)n Simple_repeat Simple_repeat 2 37 0 249 242 76 0 chr17 37994202 37994268 -47444212 + MIR SINE MIR 158 228 -34 263 258 156 48 chr17 37994463 37994630 -47443850 + L2 LINE L2 1330 1514 -1800 1505 156 103 128 chr17 37994637 37995200 -47443280 + LTR49 LTR ERV1 1 660 -47 2051 91 42 3 chr17 37995200 37995486 -47442994 + AluSg SINE Alu 1 297 -13 219 146 0 0 chr17 37995621 37995662 -47442818 + (A)n Simple_repeat Simple_repeat 1 41 0 380 234 37 9 chr17 37995918 37996025 -47442455 + L1ME4a LINE L1 6011 6120 -1 299 259 86 12 chr17 37996289 37996370 -47442110 + L2 LINE L2 3178 3264 -8 224 303 118 20 chr17 37996807 37996959 -47441521 - MIR SINE MIR -67 195 29 286 257 14 0 chr17 37997789 37997859 -47440621 + MLT1I LTR MaLR 72 142 -267 2022 108 0 4 chr17 37997970 37998247 -47440233 + AluSq SINE Alu 23 298 -15 10643 31 4 93 chr17 37998288 37999807 -47438673 + SVA Other Other 3 1386 0 2328 74 0 7 chr17 38000027 38000324 -47438156 - AluSq SINE Alu -18 295 1 759 160 0 23 chr17 38000325 38000456 -47438024 - FRAM SINE Alu -8 168 41 2989 81 24 7 chr17 38000459 38000879 -47437601 + MLT2A1 LTR ERVL 18 444 0 707 268 16 16 chr17 38001873 38002063 -47436417 - MIR SINE MIR -44 218 29 1686 87 0 0 chr17 38002068 38002287 -47436193 - AluSq SINE Alu -94 219 1 869 204 0 19 chr17 38002295 38002452 -47436028 - AluJb SINE Alu -10 302 149 2162 129 3 0 chr17 38002592 38002902 -47435578 - AluSx SINE Alu -1 311 1 1836 144 3 3 chr17 38002905 38003213 -47435267 - AluJb SINE Alu 0 308 1 512 286 58 13 chr17 38005573 38005759 -47432721 - MIR SINE MIR -11 197 2 495 266 22 67 chr17 38005869 38006039 -47432441 - MIR3 SINE MIR -9 199 36 2012 129 0 3 chr17 38006039 38006333 -47432147 - AluSx SINE Alu -19 293 1 495 266 22 67 chr17 38006333 38006361 -47432119 - MIR3 SINE MIR -172 36 8 411 301 118 30 chr17 38008361 38008564 -47429916 + MIR SINE MIR 15 235 -27 453 216 137 0 chr17 38009158 38009297 -47429183 + MIR SINE MIR 47 204 -58 699 304 38 15 chr17 38009315 38009581 -47428899 + L2 LINE L2 2212 2483 -831 428 121 30 0 chr17 38009712 38009778 -47428702 - AluSg/x SINE Alu -41 268 201 * 557 87 0 0 chr17 38009776 38009845 -47428635 + Alu SINE Alu 222 290 -19 1624 192 4 0 chr17 38009853 38010164 -47428316 + AluJb SINE Alu 1 312 0 1608 151 34 4 chr17 38010195 38010460 -47428020 - AluJb SINE Alu -5 307 35 363 310 173 15 chr17 38011793 38011990 -47426490 - MIR SINE MIR -15 247 20 2008 116 27 0 chr17 38012102 38012395 -47426085 + AluSx SINE Alu 1 301 -11 2336 100 0 0 chr17 38014953 38015263 -47423217 + AluSx SINE Alu 1 310 -2 428 265 191 0 chr17 38017343 38017398 -47421082 - MER91A DNA MER1_type 0 196 153 2292 34 45 7 chr17 38017398 38017690 -47420790 - AluY SINE Alu -8 303 1 428 265 191 0 chr17 38017690 38017796 -47420684 - MER91A DNA MER1_type -43 153 4 1289 142 5 5 chr17 38018447 38018651 -47419829 + AluJo SINE Alu 1 204 -108 316 277 138 51 chr17 38018806 38019059 -47419421 + L2 LINE L2 2903 3177 -95 2046 137 0 9 chr17 38019660 38019975 -47418505 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 38020243 38020271 -47418209 + AT_rich Low_complexity Low_complexity 1 28 0 1488 92 0 10 chr17 38020690 38020896 -47417584 + AluSq SINE Alu 1 204 -109 201 184 20 0 chr17 38020910 38020959 -47417521 + A-rich Low_complexity Low_complexity 1 50 0 1438 186 13 46 chr17 38020961 38021267 -47417213 - AluJb SINE Alu -16 296 1 191 276 32 89 chr17 38021542 38021665 -47416815 - MIR SINE MIR 0 262 147 523 326 19 56 chr17 38021668 38021935 -47416545 - MIR SINE MIR -4 258 2 263 182 0 0 chr17 38022647 38022691 -47415789 + Alu SINE Alu 1 44 -259 850 167 39 19 chr17 38022757 38022913 -47415567 + FAM SINE Alu 1 44 -5 2176 128 0 0 chr17 38022929 38023241 -47415239 + AluSx SINE Alu 1 312 0 2030 131 3 0 chr17 38023244 38023542 -47414938 + AluSx SINE Alu 1 299 -13 2142 95 0 0 chr17 38023933 38024250 -47414230 + AluSx SINE Alu 1 317 0 570 170 0 29 chr17 38024692 38024919 -47413561 + AluJo SINE Alu 2 297 -15 2007 147 3 0 chr17 38024924 38025236 -47413244 + AluSp SINE Alu 1 313 0 226 264 19 0 chr17 38025251 38025304 -47413176 - MER58 DNA MER1_type -161 54 1 1538 146 11 21 chr17 38025324 38025605 -47412875 + AluJo SINE Alu 1 278 -34 2222 92 0 13 chr17 38026416 38026721 -47411759 + AluSq SINE Alu 1 301 -12 2031 122 3 14 chr17 38027268 38027563 -47410917 + AluSx SINE Alu 1 292 -20 2337 82 0 7 chr17 38028242 38028545 -47409935 + AluSp SINE Alu 1 301 -12 454 230 35 9 chr17 38028856 38028969 -47409511 - MLT1I LTR MaLR -23 386 271 21 36 0 0 chr17 38029287 38029315 -47409165 + AT_rich Low_complexity Low_complexity 1 28 0 256 213 0 0 chr17 38029319 38029366 -47409114 + MER57A LTR ERV1 291 337 -66 30 0 1 15 chr17 38029367 38029386 -47409094 + AT_rich Low_complexity Low_complexity 1 13 -17 2300 57 7 17 chr17 38029386 38029683 -47408797 + AluSq SINE Alu 2 295 -18 30 0 1 15 chr17 38029683 38029701 -47408779 + AT_rich Low_complexity Low_complexity 13 30 0 1411 166 133 19 chr17 38029701 38029972 -47408508 + AluJb SINE Alu 1 302 0 1289 189 23 23 chr17 38030008 38030273 -47408207 - AluJo SINE Alu -9 303 39 230 56 28 0 chr17 38030373 38030409 -47408071 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 1200 176 118 39 chr17 38030409 38030664 -47407816 - AluJo SINE Alu -36 276 2 180 77 0 0 chr17 38030667 38030693 -47407787 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1582 174 0 24 chr17 38030697 38030985 -47407495 - AluJo SINE Alu -31 281 1 1934 144 0 7 chr17 38031662 38031961 -47406519 - AluJo SINE Alu -15 297 1 2107 112 0 10 chr17 38032914 38033218 -47405262 + AluSx SINE Alu 1 301 -11 967 155 19 0 chr17 38033221 38033382 -47405098 + AluSg/x SINE Alu 140 303 -7 733 202 8 0 chr17 38033427 38033556 -47404924 + FLAM_A SINE Alu 4 133 0 477 77 192 0 chr17 38033564 38033642 -47404838 + L1MA2 LINE L1 6208 6300 -4 278 290 80 30 chr17 38034053 38034153 -47404327 - MIR3 SINE MIR -47 161 57 307 267 22 0 chr17 38036962 38037052 -47401428 - MIR SINE MIR -86 176 85 2061 102 0 3 chr17 38037088 38037395 -47401085 - AluSx SINE Alu 0 306 1 2117 91 3 13 chr17 38037975 38038273 -47400207 + AluSx SINE Alu 1 295 -17 302 313 76 9 chr17 38038334 38038558 -47399922 + L2 LINE L2 2818 3056 -257 1696 136 6 87 chr17 38038757 38039080 -47399400 + AluJo SINE Alu 14 310 -2 2215 78 0 10 chr17 38039082 38039376 -47399104 + AluY SINE Alu 21 311 0 209 231 67 106 chr17 38039393 38039421 -47399059 + L2 LINE L2 2700 2728 -586 1484 204 3 19 chr17 38039421 38039730 -47398750 + AluJo SINE Alu 1 304 -8 209 231 67 106 chr17 38039730 38039805 -47398675 + L2 LINE L2 2728 2799 -515 434 276 162 55 chr17 38039863 38039929 -47398551 + L2 LINE L2 2966 3024 -289 1929 116 43 20 chr17 38039929 38040231 -47398249 - AluJb SINE Alu -3 309 1 434 276 162 55 chr17 38040231 38040472 -47398008 + L2 LINE L2 3024 3306 -7 1998 140 0 0 chr17 38041204 38041496 -47396984 - AluSx SINE Alu -19 293 2 1351 167 163 8 chr17 38041815 38042072 -47396408 - AluJb SINE Alu -5 297 1 2400 73 0 6 chr17 38042456 38042769 -47395711 + AluY SINE Alu 1 311 0 1894 134 11 0 chr17 38042821 38043098 -47395382 + AluSq SINE Alu 1 280 -33 219 172 111 0 chr17 38043106 38043205 -47395275 + GA-rich Low_complexity Low_complexity 3 112 0 795 80 21 64 chr17 38043206 38043393 -47395087 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 2120 107 3 3 chr17 38047465 38047763 -47390717 + AluSx SINE Alu 1 298 -14 1301 206 10 14 chr17 38050521 38050813 -47387667 + AluJb SINE Alu 5 295 -17 2147 107 10 0 chr17 38050816 38051115 -47387365 + AluSx SINE Alu 1 302 -10 290 229 16 0 chr17 38051737 38051798 -47386682 + L2 LINE L2 3252 3313 0 406 311 26 7 chr17 38051891 38052042 -47386438 - L3 LINE CR1 -1 1576 1423 212 341 37 0 chr17 38052080 38052162 -47386318 - L3 LINE CR1 -244 1333 1249 487 285 140 20 chr17 38052296 38052496 -47385984 - MIR SINE MIR -14 248 25 2423 93 0 0 chr17 38103975 38104287 -47334193 + AluSx SINE Alu 1 312 0 577 246 0 14 chr17 38106260 38106398 -47332082 + MIR3 SINE MIR 3 138 -70 270 236 19 19 chr17 38106956 38107062 -47331418 - Charlie8 DNA MER1_type -2271 146 41 711 126 0 42 chr17 38107122 38107241 -47331239 + FLAM_C SINE Alu 28 141 -2 2072 125 10 0 chr17 38107245 38107541 -47330939 + AluSx SINE Alu 1 299 -13 237 258 52 52 chr17 38107634 38107731 -47330749 + L2 LINE L2 3176 3272 0 379 320 93 0 chr17 38108834 38108984 -47329496 - MIR3 SINE MIR -15 193 30 1757 128 50 30 chr17 38109039 38109337 -47329143 + AluJb SINE Alu 1 304 -8 2363 91 3 0 chr17 38109338 38109647 -47328833 + AluSp SINE Alu 1 310 -3 2495 53 0 0 chr17 38109922 38110221 -47328259 - AluY SINE Alu -12 299 1 1164 37 0 0 chr17 38110221 38110355 -47328125 - AluY SINE Alu -177 134 1 356 365 98 0 chr17 38110412 38110626 -47327854 - MIR SINE MIR -5 257 23 344 352 94 27 chr17 38110645 38111310 -47327170 + L2 LINE L2 2555 3272 0 1887 152 0 23 chr17 38111315 38111625 -47326855 + AluJo SINE Alu 1 303 -9 582 168 0 0 chr17 38111647 38111742 -47326738 + FLAM_C SINE Alu 40 134 -9 2057 103 7 36 chr17 38111858 38112034 -47326446 - AluSx SINE Alu -1 311 146 2419 67 0 3 chr17 38112034 38112333 -47326147 - AluY SINE Alu -13 298 1 2057 103 7 36 chr17 38112333 38112457 -47326023 - AluSx SINE Alu -166 146 20 533 318 244 23 chr17 38112617 38112661 -47325819 + L2 LINE L2 1911 1944 -1370 2321 78 0 3 chr17 38112661 38112954 -47325526 - AluSg SINE Alu -18 292 1 533 318 244 23 chr17 38112954 38113257 -47325223 + L2 LINE L2 1944 2179 -1135 1882 138 6 32 chr17 38113257 38113569 -47324911 + AluJo SINE Alu 1 304 -8 533 318 244 23 chr17 38113569 38113871 -47324609 + L2 LINE L2 2179 2705 -609 556 78 0 0 chr17 38113883 38113960 -47324520 + Alu SINE Alu 221 297 -12 289 336 45 54 chr17 38114045 38114488 -47323992 + L2 LINE L2 2832 3270 -2 979 117 102 51 chr17 38114783 38114980 -47323500 - MER3 DNA MER1_type -2 207 1 21 95 0 0 chr17 38115477 38115540 -47322940 + GC_rich Low_complexity Low_complexity 1 63 0 25 114 0 0 chr17 38115684 38115807 -47322673 + GC_rich Low_complexity Low_complexity 1 123 0 312 241 111 9 chr17 38116430 38116538 -47321942 + MIR SINE MIR 34 152 -110 218 273 64 55 chr17 38119393 38119503 -47318977 - MIR SINE MIR -69 139 29 2230 116 0 0 chr17 38119578 38119881 -47318599 - AluSx SINE Alu -9 303 1 1599 156 3 60 chr17 38121479 38121591 -47316889 + AluJo SINE Alu 1 118 -187 2269 137 39 20 chr17 38121591 38121948 -47316532 + THE1B LTR MaLR 1 364 0 1599 156 3 60 chr17 38121948 38122157 -47316323 + AluJo SINE Alu 118 305 0 367 283 121 22 chr17 38122157 38122338 -47316142 + MIR SINE MIR 37 231 -31 456 19 0 0 chr17 38122493 38122546 -47315934 + (TG)n Simple_repeat Simple_repeat 1 53 0 2206 109 7 0 chr17 38122668 38122971 -47315509 + AluSx SINE Alu 1 305 -7 2139 113 13 3 chr17 38123661 38123962 -47314518 - AluSx SINE Alu -8 304 1 219 281 9 95 chr17 38124155 38124365 -47314115 + L2 LINE L2 3035 3226 -46 2084 115 0 7 chr17 38124614 38124931 -47313549 - AluSx SINE Alu 0 312 1 1857 140 7 3 chr17 38125719 38126011 -47312469 - AluSx SINE Alu -6 306 14 228 174 0 0 chr17 38126168 38126214 -47312266 + L2 LINE L2 3268 3313 0 2347 115 0 0 chr17 38126217 38126529 -47311951 - AluSx SINE Alu 0 312 1 193 209 23 70 chr17 38126674 38126760 -47311720 + L2 LINE L2 2931 3012 -260 2144 108 3 7 chr17 38128263 38128568 -47309912 + AluSq SINE Alu 9 312 -1 561 30 0 0 chr17 38129071 38129138 -47309342 + (CA)n Simple_repeat Simple_repeat 1 67 0 1804 130 77 63 chr17 38129429 38129582 -47308898 + MLT1B LTR MaLR 1 150 -240 2009 120 0 17 chr17 38129582 38129881 -47308599 - AluSx SINE Alu -16 296 3 1950 129 0 14 chr17 38129884 38130164 -47308316 - AluSx SINE Alu -30 282 7 1804 130 77 63 chr17 38130164 38130384 -47308096 + MLT1B LTR MaLR 151 383 -7 790 181 8 0 chr17 38130713 38130846 -47307634 - AluJo SINE Alu -178 134 1 518 217 101 79 chr17 38130846 38131035 -47307445 + MIR SINE MIR 20 212 -50 2156 97 0 7 chr17 38131059 38131377 -47307103 - AluSc SINE Alu 0 309 1 1473 189 108 65 chr17 38131620 38131805 -47306675 + MLT1C LTR MaLR 1 177 -290 2183 118 0 7 chr17 38131805 38132111 -47306369 + AluSg SINE Alu 1 304 -6 1473 189 108 65 chr17 38132111 38132369 -47306111 + MLT1C LTR MaLR 177 463 -4 270 388 25 12 chr17 38133301 38133461 -47305019 - MIR3 SINE MIR -38 170 9 342 298 60 48 chr17 38133474 38133530 -47304950 - MIR SINE MIR 0 262 208 595 201 0 79 chr17 38133530 38133669 -47304811 - FLAM_A SINE Alu -2 131 4 342 298 60 48 chr17 38133669 38133780 -47304700 - MIR SINE MIR -54 208 93 180 0 0 0 chr17 38134061 38134081 -47304399 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 218 269 31 92 chr17 38134691 38134779 -47303701 + MIR3 SINE MIR 60 152 -56 2135 116 13 0 chr17 38134779 38135080 -47303400 + AluSq SINE Alu 1 305 -8 2448 49 3 3 chr17 38135081 38135386 -47303094 + AluY SINE Alu 1 305 -6 218 269 31 92 chr17 38135386 38135425 -47303055 + MIR3 SINE MIR 151 181 -27 184 313 45 15 chr17 38136546 38136613 -47301867 - L3b LINE CR1 -225 1358 1290 22 0 0 0 chr17 38137734 38137756 -47300724 + GC_rich Low_complexity Low_complexity 1 22 0 251 264 39 140 chr17 38138093 38138178 -47300302 - MIR SINE MIR -72 190 131 2104 105 11 0 chr17 38138178 38138464 -47300016 + AluSq SINE Alu 6 294 -19 251 264 39 140 chr17 38138464 38138556 -47299924 - MIR SINE MIR -131 131 31 519 301 121 20 chr17 38138963 38139309 -47299171 + L2 LINE L2 2890 3270 -2 401 96 14 41 chr17 38139340 38139413 -47299067 + L1MB8 LINE L1 6107 6177 -1 2277 78 3 3 chr17 38139413 38139707 -47298773 - AluSc SINE Alu -15 294 1 839 302 167 3 chr17 38139854 38140208 -47298272 - L3 LINE CR1 -3 1574 1163 2443 63 0 0 chr17 38140511 38140811 -47297669 - AluY SINE Alu -10 301 2 222 302 107 13 chr17 38140874 38141023 -47297457 - L3 LINE CR1 -550 1027 865 609 263 58 54 chr17 38141228 38141358 -47297122 - MIR SINE MIR -7 255 122 2457 65 0 3 chr17 38141358 38141667 -47296813 + AluY SINE Alu 1 308 -3 609 263 58 54 chr17 38141667 38141760 -47296720 - MIR SINE MIR -140 122 31 283 271 21 52 chr17 38142076 38142172 -47296308 + L2 LINE L2 3220 3312 -1 436 291 73 24 chr17 38142219 38142384 -47296096 + MIR SINE MIR 77 249 -13 280 276 19 67 chr17 38142377 38142482 -47295998 - MIR SINE MIR -94 168 69 * 274 279 56 114 chr17 38143864 38144070 -47294410 + MIR3 SINE MIR 7 198 -62 1524 137 73 67 chr17 38144079 38144221 -47294259 + AluJb SINE Alu 1 141 -171 294 95 0 0 chr17 38144221 38144263 -47294217 + (TA)n Simple_repeat Simple_repeat 2 43 0 1524 137 73 67 chr17 38144263 38144420 -47294060 + AluJb SINE Alu 141 302 -10 1461 164 85 51 chr17 38144424 38144717 -47293763 + AluJo SINE Alu 1 303 -9 472 240 147 7 chr17 38145919 38146069 -47292411 + MIR SINE MIR 79 249 -13 423 208 36 119 chr17 38146067 38146235 -47292245 - L2 LINE L2 -4 3309 3156 * 483 273 58 70 chr17 38146332 38146410 -47292070 - MER5B DNA MER1_type -4 174 97 1864 120 46 7 chr17 38146410 38146693 -47291787 - AluSx SINE Alu -18 294 1 483 273 58 70 chr17 38146693 38146786 -47291694 - MER5B DNA MER1_type -81 97 5 332 233 118 19 chr17 38146801 38146927 -47291553 - MER5A DNA MER1_type -6 172 46 570 78 13 0 chr17 38147278 38147355 -47291125 - AluS SINE Alu -235 78 1 947 153 0 0 chr17 38147674 38147811 -47290669 + AluJo SINE Alu 7 143 -169 2146 115 3 0 chr17 38147813 38148117 -47290363 + AluSx SINE Alu 1 305 -7 530 170 62 0 chr17 38148127 38148218 -47290262 + LTR64 LTR ERVK 1 102 -456 2192 92 0 16 chr17 38148218 38148524 -47289956 - AluY SINE Alu -10 301 1 530 170 62 0 chr17 38148524 38148544 -47289936 + LTR64 LTR ERVK 102 119 -439 683 156 67 17 chr17 38148546 38148725 -47289755 + MER4-int LTR ERV1 3831 4018 -2580 2256 119 0 0 chr17 38148725 38149037 -47289443 - AluSx SINE Alu 0 312 1 1361 171 77 18 chr17 38149088 38149374 -47289106 + AluJo SINE Alu 9 311 -1 365 193 51 37 chr17 38149376 38149508 -47288972 + MER4-int LTR ERV1 4067 4748 -1850 1830 149 10 29 chr17 38149627 38149935 -47288545 - AluJo SINE Alu -10 302 1 1554 127 0 0 chr17 38150033 38150245 -47288235 + AluSx SINE Alu 1 212 -100 1108 167 0 102 chr17 38150245 38150291 -47288189 + AluJb SINE Alu 78 127 -185 1800 137 19 54 chr17 38150291 38150604 -47287876 - AluSx SINE Alu -10 302 1 1108 167 0 102 chr17 38150604 38150615 -47287865 + AluJb SINE Alu 127 138 -174 2223 97 0 3 chr17 38150615 38150915 -47287565 - AluSg SINE Alu -11 299 1 1108 167 0 102 chr17 38150915 38151101 -47287379 + AluJb SINE Alu 138 297 -15 22 0 0 0 chr17 38151104 38151126 -47287354 + AT_rich Low_complexity Low_complexity 1 22 0 1804 129 37 0 chr17 38151128 38151420 -47287060 + AluSx SINE Alu 1 302 0 2291 96 0 0 chr17 38151438 38151739 -47286741 + AluSx SINE Alu 1 301 -11 2122 72 29 7 chr17 38151847 38152126 -47286354 - AluSp SINE Alu -13 300 16 996 146 15 39 chr17 38152456 38152661 -47285819 + LTR64 LTR ERVK 1 200 -358 729 179 0 15 chr17 38152661 38152795 -47285685 + FLAM_C SINE Alu 1 132 -11 774 173 61 2 chr17 38152795 38153070 -47285410 + LTR64 LTR ERVK 191 545 -13 294 281 67 0 chr17 38153080 38153169 -47285311 + MIR SINE MIR 163 257 -5 280 192 68 14 chr17 38153219 38153292 -47285188 - MIR SINE MIR -93 169 93 794 152 0 15 chr17 38153878 38154010 -47284470 - AluJb SINE Alu -46 266 137 285 224 28 75 chr17 38154029 38154136 -47284344 + L2 LINE L2 2604 2705 -609 1313 128 51 0 chr17 38154146 38154368 -47284112 + AluJb SINE Alu 85 312 0 431 329 143 18 chr17 38155041 38155296 -47283184 + L2 LINE L2 2825 3047 -225 2368 78 10 3 chr17 38155296 38155603 -47282877 - AluSx SINE Alu -3 309 1 431 329 143 18 chr17 38155603 38155631 -47282849 + L2 LINE L2 3047 3070 -202 2268 53 43 0 chr17 38155631 38155913 -47282567 + AluYa5 SINE Alu 1 294 -17 431 329 143 18 chr17 38155913 38156026 -47282454 + L2 LINE L2 3070 3272 0 1544 154 27 57 chr17 38156193 38156491 -47281989 + AluJo SINE Alu 21 309 -3 301 281 117 23 chr17 38156997 38157125 -47281355 + MIR3 SINE MIR 5 144 -64 1911 130 3 17 chr17 38157136 38157437 -47281043 + AluSx SINE Alu 1 297 -15 1999 139 0 13 chr17 38158587 38158903 -47279577 - AluSx SINE Alu 0 312 1 2188 111 3 0 chr17 38159003 38159301 -47279179 - AluSq SINE Alu -14 299 1 276 331 11 17 chr17 38159462 38159640 -47278840 + GA-rich Low_complexity Low_complexity 3 179 0 2545 242 60 19 chr17 38160861 38161527 -47276953 - MER115 DNA AcHobo 0 693 1 917 267 52 0 chr17 38162087 38162319 -47276161 - MIR SINE MIR -7 255 12 190 284 49 25 chr17 38162660 38162741 -47275739 + L2 LINE L2 3007 3089 -183 185 125 0 21 chr17 38163498 38163546 -47274934 + (CGGGG)n Simple_repeat Simple_repeat 1 47 0 1950 145 0 3 chr17 38164927 38165231 -47273249 - AluSx SINE Alu -9 303 1 1471 191 56 30 chr17 38165248 38165552 -47272928 + AluJb SINE Alu 1 312 0 2054 104 7 10 chr17 38165556 38165845 -47272635 + AluSx SINE Alu 1 288 -24 232 280 106 15 chr17 38165969 38166040 -47272440 + L1MA10 LINE L1 6180 6243 -91 2171 107 0 16 chr17 38166040 38166348 -47272132 + AluSq SINE Alu 1 303 -10 232 280 106 15 chr17 38166348 38166408 -47272072 + L1MA10 LINE L1 6243 6323 -11 300 330 57 65 chr17 38167522 38167801 -47270679 + L2 LINE L2 2578 2854 -460 1919 122 42 14 chr17 38167818 38168105 -47270375 - AluSx SINE Alu -17 295 1 574 303 0 7 chr17 38168379 38168534 -47269946 + MIR SINE MIR 47 200 -62 1941 96 66 0 chr17 38168969 38169240 -47269240 + AluSg SINE Alu 9 297 -13 1057 184 0 5 chr17 38171011 38171362 -47267118 + AluJo SINE Alu 119 468 0 2287 97 0 7 chr17 38171533 38171843 -47266637 + AluSx SINE Alu 1 308 -4 1729 145 13 33 chr17 38172097 38172400 -47266080 + AluJo SINE Alu 1 297 -15 205 179 0 90 chr17 38172912 38172979 -47265501 + C-rich Low_complexity Low_complexity 5 65 0 2685 156 124 49 chr17 38173346 38173917 -47264563 + LTR18B LTR ERVL 1 614 0 374 282 38 53 chr17 38174137 38174268 -47264212 - MIR SINE MIR -62 146 18 560 305 96 34 chr17 38174506 38174631 -47263849 - L2 LINE L2 -3 3269 3153 2266 82 17 0 chr17 38174631 38174923 -47263557 + AluSx SINE Alu 1 297 -15 2348 87 0 3 chr17 38174923 38175234 -47263246 + AluSg SINE Alu 1 310 0 560 305 96 34 chr17 38175234 38175612 -47262868 - L2 LINE L2 -118 3154 2726 262 239 17 0 chr17 38176079 38176146 -47262334 - MIR SINE MIR -65 143 82 203 236 0 18 chr17 38178955 38179010 -47259470 + G-rich Low_complexity Low_complexity 4 57 0 452 293 48 20 chr17 38181046 38181246 -47257234 - MIR SINE MIR -24 238 27 1881 130 16 32 chr17 38181453 38181769 -47256711 + AluJb SINE Alu 1 311 -1 318 267 163 29 chr17 38183909 38184081 -47254399 + MER117 DNA MER1_type 1 195 -2 301 204 7 48 chr17 38186157 38186304 -47252176 + (CTGGGG)n Simple_repeat Simple_repeat 6 146 0 475 106 0 106 chr17 38186881 38186985 -47251495 + FLAM_A SINE Alu 44 136 -6 1007 100 0 0 chr17 38186992 38187122 -47251358 + FLAM_C SINE Alu 1 130 -3 1895 77 19 15 chr17 38188483 38188743 -47249737 + AluSx SINE Alu 52 312 0 2619 39 0 3 chr17 38188744 38189054 -47249426 + AluY SINE Alu 2 310 -1 2231 96 17 0 chr17 38189053 38189354 -47249126 + AluSq SINE Alu 1 306 -7 * 468 216 0 10 chr17 38191063 38191165 -47247315 - MIR SINE MIR -133 129 29 2424 77 0 0 chr17 38191368 38191678 -47246802 + AluY SINE Alu 1 310 -1 280 286 0 12 chr17 38192140 38192224 -47246256 + L1ME3 LINE L1 5631 5713 -2095 1676 139 61 3 chr17 38192549 38192844 -47245636 - AluJb SINE Alu 0 312 1 1641 164 32 11 chr17 38192845 38193125 -47245355 - AluJo SINE Alu -14 298 13 207 314 29 20 chr17 38195059 38195161 -47243319 - MIR SINE MIR -85 123 21 216 0 0 0 chr17 38195981 38196005 -47242475 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 371 215 6 0 chr17 38196387 38196564 -47241916 + (CA)n Simple_repeat Simple_repeat 2 179 0 1030 139 115 103 chr17 38197561 38197813 -47240667 - AluJo SINE Alu -19 293 39 201 337 24 0 chr17 38197848 38197931 -47240549 - MIR SINE MIR -115 147 63 231 200 0 0 chr17 38198505 38198550 -47239930 - MER5B DNA MER1_type 0 178 134 204 257 129 0 chr17 38198700 38198770 -47239710 + MIR SINE MIR 67 145 -117 1045 138 6 6 chr17 38199443 38199603 -47238877 + AluSg/x SINE Alu 129 288 -22 1620 141 59 24 chr17 38199983 38200273 -47238207 - AluSg SINE Alu 0 310 11 784 149 33 0 chr17 38200278 38200399 -47238081 - AluJb SINE Alu -11 301 177 195 286 181 23 chr17 38200401 38200534 -47237946 - MER5A DNA MER1_type -9 180 27 333 236 182 18 chr17 38200414 38200524 -47237956 + MER5B DNA MER1_type 25 152 -26 396 283 72 45 chr17 38201458 38201698 -47236782 + MIR SINE MIR 5 260 -2 340 244 115 51 chr17 38201708 38201864 -47236616 - MIR3 SINE MIR -6 202 37 2211 105 0 0 chr17 38202042 38202346 -47236134 + AluSx SINE Alu 2 305 -7 315 250 58 8 chr17 38202357 38202477 -47236003 + L1ME3 LINE L1 6035 6160 -2 2352 82 0 0 chr17 38202624 38202929 -47235551 + AluSc SINE Alu 1 305 -4 3665 72 4 8 chr17 38204192 38204677 -47233803 + L1PA4 LINE L1 5670 6152 -3 226 239 83 65 chr17 38204686 38204916 -47233564 + L1ME LINE L1 5677 5910 -211 360 0 0 0 chr17 38204975 38205015 -47233465 + (TG)n Simple_repeat Simple_repeat 1 40 0 1873 159 3 0 chr17 38205060 38205350 -47233130 + AluJo SINE Alu 1 291 -21 1623 111 13 4 chr17 38206427 38206661 -47231819 - AluY SINE Alu -18 293 58 1946 152 0 0 chr17 38207508 38207810 -47230670 + AluSx SINE Alu 1 302 -10 543 198 87 68 chr17 38207810 38207954 -47230526 - L1MC3 LINE L1 -816 6969 6818 1892 143 7 0 chr17 38207954 38208240 -47230240 - AluSx SINE Alu -24 288 1 543 198 87 68 chr17 38208240 38208297 -47230183 - L1MC3 LINE L1 -967 6818 6764 212 204 23 0 chr17 38208900 38208944 -47229536 + (CA)n Simple_repeat Simple_repeat 2 46 0 233 263 13 26 chr17 38208981 38209057 -47229423 - MIR3 SINE MIR -20 188 114 22 80 0 0 chr17 38209181 38209231 -47229249 + GC_rich Low_complexity Low_complexity 1 50 0 675 220 148 5 chr17 38210920 38211129 -47227351 - MIR SINE MIR -22 240 2 415 280 70 19 chr17 38211713 38211870 -47226610 + MIR3 SINE MIR 21 185 -23 189 206 0 0 chr17 38213515 38213549 -47224931 + L2 LINE L2 3249 3282 -31 2326 90 0 6 chr17 38213698 38214010 -47224470 - AluSg SINE Alu 0 310 1 183 243 0 62 chr17 38214017 38214082 -47224398 + L2 LINE L2 2915 2977 -300 423 253 0 11 chr17 38214376 38214471 -47224009 + AluJb SINE Alu 135 228 -84 443 238 59 0 chr17 38214529 38214630 -47223850 - AluJb SINE Alu -68 244 138 437 243 22 54 chr17 38214658 38214843 -47223637 + AluSg SINE Alu 2 180 -130 248 317 10 19 chr17 38214967 38215071 -47223409 - AluSg/x SINE Alu -107 195 93 920 112 0 0 chr17 38215601 38215726 -47222754 + AluJb SINE Alu 1 125 -187 447 323 124 26 chr17 38216093 38216319 -47222161 - MIR SINE MIR -10 252 5 1971 153 0 0 chr17 38216811 38217112 -47221368 + AluJb SINE Alu 4 304 -8 2291 97 0 7 chr17 38217112 38217421 -47221059 + AluSx SINE Alu 1 308 -4 473 151 0 0 chr17 38217573 38217646 -47220834 + AluSp/q SINE Alu 229 301 -12 469 275 50 30 chr17 38217672 38217756 -47220724 - L1MC4 LINE L1 -507 7535 7454 1253 215 136 0 chr17 38217756 38218058 -47220422 - MER2 DNA MER2_type -1 343 1 469 275 50 30 chr17 38218058 38218173 -47220307 - L1MC4 LINE L1 -588 7454 7332 1579 161 18 7 chr17 38218256 38218529 -47219951 + AluJb SINE Alu 32 307 -5 261 0 0 0 chr17 38219534 38219563 -47218917 + (A)n Simple_repeat Simple_repeat 1 29 0 1628 76 97 69 chr17 38219565 38219854 -47218626 + AluSq SINE Alu 1 297 -16 512 245 45 19 chr17 38219953 38220108 -47218372 - MIR SINE MIR -102 160 2 2348 67 0 3 chr17 38220144 38220442 -47218038 + AluY SINE Alu 1 297 -14 222 316 0 51 chr17 38220998 38221077 -47217403 + MIR SINE MIR 47 121 -141 2168 114 3 0 chr17 38221485 38221782 -47216698 + AluSx SINE Alu 1 298 -14 2300 96 0 3 chr17 38222121 38222433 -47216047 + AluSx SINE Alu 1 311 -1 2226 52 21 7 chr17 38224237 38224525 -47213955 - AluSx SINE Alu -15 297 6 457 286 77 10 chr17 38225285 38225481 -47212999 - L1MC4 LINE L1 0 8042 7834 1947 113 3 37 chr17 38225483 38225819 -47212661 - AluSx SINE Alu 0 312 1 1896 93 0 0 chr17 38225829 38226077 -47212403 - AluSp SINE Alu -6 307 60 701 108 100 85 chr17 38226132 38226213 -47212267 + AluJo/FLAM SINE Alu 1 86 -216 2059 120 0 19 chr17 38226213 38226521 -47211959 + AluSx SINE Alu 1 302 -10 701 108 100 85 chr17 38226521 38226569 -47211911 + AluJo/FLAM SINE Alu 86 132 -170 1807 151 17 3 chr17 38226807 38227098 -47211382 - AluJb SINE Alu -17 295 1 457 202 85 16 chr17 38227394 38227523 -47210957 - MIR SINE MIR 0 262 125 410 334 101 49 chr17 38227550 38227915 -47210565 + L2 LINE L2 2883 3266 -6 2012 120 17 0 chr17 38227967 38228268 -47210212 - AluSg SINE Alu -4 306 1 2292 95 0 3 chr17 38228276 38228582 -47209898 - AluSp SINE Alu -8 305 1 362 214 0 28 chr17 38229227 38229372 -47209108 + CT-rich Low_complexity Low_complexity 1 141 0 3553 39 4 4 chr17 38229586 38230270 -47208210 - L1P1 LINE L1 -401 5754 5071 741 235 77 72 chr17 38230269 38230351 -47208129 - L1ME LINE L1 -428 5693 5613 * 2025 98 69 0 chr17 38230351 38230629 -47207851 - AluSg SINE Alu -15 295 1 741 235 77 72 chr17 38230629 38230957 -47207523 - L1ME LINE L1 -508 5613 5256 759 154 0 8 chr17 38231225 38231348 -47207132 + FLAM_A SINE Alu 1 122 -11 33 0 0 0 chr17 38231348 38231381 -47207099 + AT_rich Low_complexity Low_complexity 1 33 0 343 100 17 0 chr17 38231478 38231538 -47206942 + Alu SINE Alu 242 302 0 385 200 61 35 chr17 38231571 38231686 -47206794 + FLAM_C SINE Alu 1 118 -15 7180 117 37 38 chr17 38231945 38232655 -47205825 + Tigger3b DNA MER2_type 2 711 -2317 2394 88 3 3 chr17 38232655 38232961 -47205519 + AluSx SINE Alu 1 306 -6 7180 117 37 38 chr17 38232961 38233481 -47204999 + Tigger3b DNA MER2_type 711 1230 -1 2322 101 0 0 chr17 38234056 38234353 -47204127 - AluSx SINE Alu -15 297 1 2226 104 3 0 chr17 38234907 38235194 -47203286 + AluSx SINE Alu 1 288 -24 375 277 91 16 chr17 38235731 38235939 -47202541 + MIR SINE MIR 38 262 0 2127 92 24 10 chr17 38236253 38236546 -47201934 + AluSx SINE Alu 1 297 -15 2084 122 0 7 chr17 38237329 38237625 -47200855 - AluSx SINE Alu -14 298 5 21 36 0 0 chr17 38237652 38237680 -47200800 + AT_rich Low_complexity Low_complexity 1 28 0 42 86 0 0 chr17 38237697 38237802 -47200678 + AT_rich Low_complexity Low_complexity 1 105 0 703 208 0 0 chr17 38237850 38237970 -47200510 - FLAM_A SINE Alu -12 121 2 1719 182 0 0 chr17 38238005 38238285 -47200195 - AluJb SINE Alu -9 303 24 2280 119 7 0 chr17 38238905 38239215 -47199265 - AluSx SINE Alu 0 312 1 2236 105 17 0 chr17 38239507 38239803 -47198677 - AluSx SINE Alu -11 301 1 2461 72 0 7 chr17 38240151 38240456 -47198024 - AluY SINE Alu -8 303 1 2075 129 3 7 chr17 38241244 38241538 -47196942 + AluSx SINE Alu 1 293 -19 478 272 138 12 chr17 38241778 38242032 -47196448 + L2 LINE L2 3028 3313 0 2230 80 21 7 chr17 38242153 38242442 -47196038 - AluSc SINE Alu -16 293 1 336 294 0 0 chr17 38242451 38242536 -47195944 + L2 LINE L2 3188 3272 0 2313 88 17 0 chr17 38243105 38243402 -47195078 - AluSx SINE Alu -9 303 2 467 263 51 32 chr17 38244458 38244614 -47193866 + MIR SINE MIR 104 262 0 510 17 0 0 chr17 38244759 38244818 -47193662 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1625 173 0 60 chr17 38244818 38245118 -47193362 - AluJo SINE Alu -30 282 1 2176 82 11 7 chr17 38245118 38245397 -47193083 - AluSg1 SINE Alu -9 300 21 2442 87 0 0 chr17 38245634 38245934 -47192546 + AluSc SINE Alu 1 300 -9 195 179 104 0 chr17 38246259 38246326 -47192154 - MIR SINE MIR -50 212 139 2810 166 64 57 chr17 38246331 38246511 -47191969 + L1MB7 LINE L1 5511 5688 -496 2142 99 0 56 chr17 38246511 38246833 -47191647 + AluSx SINE Alu 1 304 -8 2810 166 64 57 chr17 38246833 38247321 -47191159 + L1MB7 LINE L1 5688 6184 0 1084 82 8 0 chr17 38247725 38247859 -47190621 + AluSp SINE Alu 1 135 -178 2603 23 16 7 chr17 38247860 38248167 -47190313 + SVA Other Other 1067 1376 -10 360 0 0 0 chr17 38248450 38248490 -47189990 + (TG)n Simple_repeat Simple_repeat 1 40 0 2028 158 3 0 chr17 38248535 38248846 -47189634 + AluJb SINE Alu 1 312 0 1920 148 31 0 chr17 38249187 38249477 -47189003 + AluSx SINE Alu 1 299 -13 1388 146 66 114 chr17 38249546 38249717 -47188763 - Charlie5 DNA MER1_type 0 2624 2446 1731 148 0 11 chr17 38249717 38249981 -47188499 + AluJb SINE Alu 35 295 -17 1388 146 66 114 chr17 38249981 38250220 -47188260 - Charlie5 DNA MER1_type -178 2446 2234 680 181 8 8 chr17 38250229 38250356 -47188124 - MER3 DNA MER1_type -41 168 42 723 98 20 0 chr17 38250435 38250537 -47187943 + L1PA10 LINE L1 6065 6168 0 2105 115 27 0 chr17 38250594 38250889 -47187591 - AluSq SINE Alu -9 304 2 911 134 0 0 chr17 38251093 38251220 -47187260 + FLAM_C SINE Alu 1 127 -6 2258 119 0 0 chr17 38251695 38251998 -47186482 - AluSx SINE Alu -9 303 1 289 81 0 0 chr17 38252426 38252463 -47186017 + tRNA-Glu-GAG tRNA tRNA 1 37 -38 21 57 0 0 chr17 38253184 38253219 -47185261 + AT_rich Low_complexity Low_complexity 1 35 0 444 268 71 0 chr17 38253222 38253334 -47185146 + L2 LINE L2 3190 3309 -4 992 171 203 16 chr17 38253352 38253506 -47184974 - MER44D DNA MER2_type -1923 568 444 2485 80 0 10 chr17 38253506 38253817 -47184663 - AluY SINE Alu -3 308 1 992 171 203 16 chr17 38253817 38253913 -47184567 - MER44D DNA MER2_type -2047 444 1 756 163 0 0 chr17 38254014 38254137 -47184343 + FLAM_C SINE Alu 1 123 -10 1427 133 9 89 chr17 38254258 38254312 -47184168 - L1MB3 LINE L1 -3 6180 6123 1894 120 62 0 chr17 38254312 38254586 -47183894 - AluSx SINE Alu -21 291 1 1427 133 9 89 chr17 38254586 38254846 -47183634 - L1MB3 LINE L1 -60 6123 5891 2359 79 0 3 chr17 38255293 38255584 -47182896 - AluSc SINE Alu -19 290 1 345 210 25 0 chr17 38255584 38255665 -47182815 + Charlie5 DNA MER1_type 2542 2624 0 559 168 5 17 chr17 38255821 38255958 -47182522 - L1MB3 LINE L1 -200 5981 5852 2227 88 3 3 chr17 38256361 38256646 -47181834 - AluSc SINE Alu -19 290 6 260 271 31 31 chr17 38256650 38256789 -47181691 + CT-rich Low_complexity Low_complexity 1 139 0 21 0 0 0 chr17 38257086 38257107 -47181373 + AT_rich Low_complexity Low_complexity 1 21 0 1545 140 0 18 chr17 38257113 38257341 -47181139 - AluJo SINE Alu -61 251 28 22 0 0 0 chr17 38257528 38257550 -47180930 + AT_rich Low_complexity Low_complexity 1 22 0 784 217 0 0 chr17 38257622 38257774 -47180706 + FRAM SINE Alu 1 152 -24 312 27 0 0 chr17 38258317 38258354 -47180126 + (GAAA)n Simple_repeat Simple_repeat 1 37 0 248 363 62 18 chr17 38258934 38259047 -47179433 - L2 LINE L2 -8 3264 3147 2393 92 0 3 chr17 38259435 38259740 -47178740 - AluSg SINE Alu -2 308 5 2417 87 0 0 chr17 38260519 38260819 -47177661 - AluY SINE Alu -11 300 1 218 208 21 0 chr17 38260896 38260944 -47177536 + (CTA)n Simple_repeat Simple_repeat 2 50 0 1923 149 0 3 chr17 38261505 38261794 -47176686 + AluJb SINE Alu 6 293 -19 2286 111 0 3 chr17 38262046 38262352 -47176128 - AluSx SINE Alu -7 305 1 1830 176 13 0 chr17 38263165 38263466 -47175014 - AluJo SINE Alu -7 305 1 1766 176 3 17 chr17 38263495 38263796 -47174684 - AluJo SINE Alu -15 297 1 816 187 41 18 chr17 38264661 38264832 -47173648 - AluJo SINE Alu -16 296 122 29 94 0 0 chr17 38265044 38265129 -47173351 + AT_rich Low_complexity Low_complexity 1 85 0 1664 168 0 21 chr17 38265503 38265638 -47172842 + AluSg SINE Alu 1 137 -173 2508 72 0 3 chr17 38265638 38265942 -47172538 + AluSq SINE Alu 1 303 -10 1664 168 0 21 chr17 38265942 38266086 -47172394 + AluSg SINE Alu 137 274 -36 2532 70 0 3 chr17 38266086 38266388 -47172092 + AluSc SINE Alu 1 301 -8 884 189 0 33 chr17 38266388 38266568 -47171912 + AluSc SINE Alu 132 305 -4 279 235 62 12 chr17 38266621 38266702 -47171778 - L1ME LINE L1 -304 5817 5733 2073 146 0 9 chr17 38267071 38267386 -47171094 + AluJo SINE Alu 1 312 0 558 282 57 27 chr17 38267763 38268061 -47170419 - L1MC4 LINE L1 0 8042 7736 1178 141 0 6 chr17 38268091 38268268 -47170212 - AluSx SINE Alu -16 294 119 28 71 0 0 chr17 38268268 38268324 -47170156 + AT_rich Low_complexity Low_complexity 1 56 0 2931 16 0 3 chr17 38268326 38268640 -47169840 - SVA Other Other -7 1379 1067 1005 126 0 0 chr17 38268641 38268776 -47169704 - AluSx SINE Alu -177 135 1 973 189 265 11 chr17 38268801 38269156 -47169324 - L1MC4 LINE L1 -401 7641 7197 205 349 0 0 chr17 38269280 38269346 -47169134 + CT-rich Low_complexity Low_complexity 2 67 0 2332 111 0 0 chr17 38269719 38270016 -47168464 + AluSx SINE Alu 1 297 -15 229 98 0 0 chr17 38270102 38270143 -47168337 - Alu SINE Alu -2 301 261 1350 185 0 14 chr17 38270552 38270768 -47167712 + AluSg/x SINE Alu 90 302 -10 1743 146 31 14 chr17 38271360 38271648 -47166832 - AluJo SINE Alu -19 293 1 474 284 116 31 chr17 38271942 38272167 -47166313 - MIR SINE MIR -6 256 13 2232 110 0 10 chr17 38272225 38272525 -47165955 - AluSx SINE Alu -15 297 1 741 167 14 28 chr17 38273136 38273280 -47165200 - FLAM_C SINE Alu 0 143 2 2018 129 45 3 chr17 38273296 38273582 -47164898 - AluSx SINE Alu -14 298 1 189 107 0 0 chr17 38273715 38273743 -47164737 + (CA)n Simple_repeat Simple_repeat 1 28 0 2272 79 0 54 chr17 38274293 38274609 -47163871 - AluSq SINE Alu -14 299 1 182 37 37 0 chr17 38276704 38276731 -47161749 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 351 332 32 5 chr17 38276766 38276956 -47161524 + MIR SINE MIR 34 228 -34 342 275 101 0 chr17 38278323 38278432 -47160048 - L2 LINE L2 -16 3256 3137 815 38 22 60 chr17 38278501 38278819 -47159661 + (TG)n Simple_repeat Simple_repeat 1 305 0 640 252 0 0 chr17 38279147 38279278 -47159202 - FLAM_C SINE Alu -1 132 2 2393 79 3 10 chr17 38279284 38279587 -47158893 - AluSq SINE Alu -12 301 1 277 136 0 0 chr17 38280947 38280991 -47157489 - Alu SINE Alu -2 300 257 1591 152 15 8 chr17 38280952 38281216 -47157264 - AluJb SINE Alu -17 295 30 1985 105 0 0 chr17 38281650 38281927 -47156553 - AluSx SINE Alu -4 308 32 1256 253 53 107 chr17 38282010 38282125 -47156355 + L1MC4 LINE L1 7332 7452 -590 1178 209 139 3 chr17 38282125 38282427 -47156053 + MER2 DNA MER2_type 1 343 -1 1256 253 53 107 chr17 38282427 38282549 -47155931 + L1MC4 LINE L1 7452 7579 -463 2126 114 0 0 chr17 38282549 38282838 -47155642 - AluSq SINE Alu -24 289 1 1256 253 53 107 chr17 38282838 38283129 -47155351 + L1MC4 LINE L1 7579 7884 -158 2428 70 0 0 chr17 38283129 38283431 -47155049 + AluSp SINE Alu 1 302 -11 1256 253 53 107 chr17 38283431 38283446 -47155034 + L1MC4 LINE L1 7884 7898 -144 1931 109 3 37 chr17 38283446 38283777 -47154703 + AluSx SINE Alu 1 321 0 1256 253 53 107 chr17 38283777 38283980 -47154500 + L1MC4 LINE L1 7898 8042 0 22 0 0 0 chr17 38284501 38284523 -47153957 + AT_rich Low_complexity Low_complexity 1 22 0 314 136 0 17 chr17 38284976 38285035 -47153445 + (TTCC)n Simple_repeat Simple_repeat 4 61 0 1927 113 3 11 chr17 38285253 38285536 -47152944 + AluSx SINE Alu 1 281 -31 183 42 0 0 chr17 38285539 38285563 -47152917 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1658 118 0 0 chr17 38285762 38285991 -47152489 - AluSx SINE Alu -21 291 63 23 0 0 0 chr17 38286091 38286114 -47152366 + GC_rich Low_complexity Low_complexity 1 23 0 267 152 0 0 chr17 38286429 38286475 -47152005 + C-rich Low_complexity Low_complexity 1 46 0 204 245 0 0 chr17 38286543 38286596 -47151884 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 230 122 0 0 chr17 38286598 38286639 -47151841 + LTR66 LTR ERVL 398 438 -172 262 261 23 0 chr17 38286644 38286732 -47151748 - L1MC4 LINE L1 -1339 6703 6614 249 292 0 0 chr17 38286656 38286745 -47151735 + L1MC4 LINE L1 6614 6702 -1340 * 330 294 64 28 chr17 38286750 38286859 -47151621 - L1MC4 LINE L1 -1339 6703 6591 1164 160 9 5 chr17 38287199 38287411 -47151069 + AluJo SINE Alu 88 300 -12 743 188 0 0 chr17 38287573 38287690 -47150790 + FLAM_C SINE Alu 2 118 -25 2055 97 21 0 chr17 38287712 38288001 -47150479 + AluSg SINE Alu 1 295 -15 429 172 81 0 chr17 38288837 38288936 -47149544 + MIR SINE MIR 32 138 -70 2227 97 7 0 chr17 38289261 38289560 -47148920 - AluSx SINE Alu -10 302 2 1660 166 3 3 chr17 38289567 38289857 -47148623 - AluJb SINE Alu -9 303 14 2146 97 0 0 chr17 38291198 38291488 -47146992 + AluSg SINE Alu 14 303 -7 1932 103 21 7 chr17 38291488 38291779 -47146701 + AluSx SINE Alu 1 295 -17 1024 143 12 0 chr17 38291779 38291940 -47146540 + AluSg/x SINE Alu 134 296 -16 394 130 39 0 chr17 38293090 38293167 -47145313 - L1MB4 LINE L1 0 6180 6101 180 0 0 0 chr17 38293228 38293248 -47145232 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 742 142 53 0 chr17 38293253 38293366 -47145114 - AluSg/x SINE Alu -57 255 137 2186 118 0 0 chr17 38293367 38293672 -47144808 - AluSx SINE Alu -7 305 1 348 300 27 0 chr17 38293926 38294036 -47144444 + MIR3 SINE MIR 50 162 -46 1063 192 22 9 chr17 38294040 38294264 -47144216 - AluJo SINE Alu 0 312 86 800 149 0 8 chr17 38294282 38294416 -47144064 - AluJo SINE Alu -175 137 5 362 200 0 3 chr17 38294545 38294623 -47143857 + AluS SINE Alu 1 60 -243 1146 147 5 5 chr17 38294623 38294813 -47143667 + AluSg/x SINE Alu 113 302 -7 356 283 63 72 chr17 38295211 38295242 -47143238 + HAL1b LINE L1 1110 1140 -208 1619 199 0 3 chr17 38295242 38295543 -47142937 + AluJo SINE Alu 1 300 -12 356 283 63 72 chr17 38295543 38295748 -47142732 + HAL1b LINE L1 1140 1344 -4 33 56 0 0 chr17 38295817 38295871 -47142609 + AT_rich Low_complexity Low_complexity 1 54 0 1972 116 0 22 chr17 38295898 38296209 -47142271 - AluSx SINE Alu -8 304 1 227 211 42 105 chr17 38297005 38297100 -47141380 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38297125 38297320 -47141160 - MSR1 Satellite Satellite 0 182 1 227 211 42 105 chr17 38297425 38297520 -47140960 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38297545 38297640 -47140840 - MSR1 Satellite Satellite 0 111 23 1780 125 30 43 chr17 38298117 38298420 -47140060 + AluJb SINE Alu 1 299 -13 701 224 0 8 chr17 38299030 38299146 -47139334 + FLAM_C SINE Alu 1 117 -185 195 42 0 0 chr17 38299146 38299170 -47139310 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 701 224 0 8 chr17 38299170 38299187 -47139293 + FLAM_C SINE Alu 117 133 -169 2108 104 10 0 chr17 38299224 38299521 -47138959 + AluSp SINE Alu 2 301 -12 1046 201 0 63 chr17 38299532 38299771 -47138709 + AluJo SINE Alu 1 224 -88 197 377 79 19 chr17 38300448 38300663 -47137817 + L2 LINE L2 2857 3084 -229 1047 218 32 0 chr17 38300858 38301074 -47137406 - MER58A DNA MER1_type 0 224 2 2150 110 3 3 chr17 38301348 38301647 -47136833 + AluSx SINE Alu 1 299 -13 566 223 223 6 chr17 38301726 38301901 -47136579 - MIR SINE MIR -15 247 35 186 352 57 19 chr17 38301981 38302086 -47136394 + L2 LINE L2 2867 2975 -338 1500 115 8 29 chr17 38302095 38302339 -47136141 + AluJo SINE Alu 66 304 -8 2225 93 10 0 chr17 38302600 38302901 -47135579 - AluSc SINE Alu -5 304 1 412 300 110 26 chr17 38302974 38303284 -47135196 - L1M4 LINE L1 -1833 4313 3978 2306 84 0 0 chr17 38303289 38303587 -47134893 + AluY SINE Alu 1 298 -13 316 169 0 0 chr17 38304015 38304074 -47134406 - LTR54 LTR ERV1 -49 461 403 398 170 185 52 chr17 38304100 38304235 -47134245 - MER105 DNA DNA -22 182 30 275 118 141 0 chr17 38304965 38305050 -47133430 - L1ME4a LINE L1 -10 6111 6015 838 175 39 0 chr17 38305078 38305232 -47133248 + AluJb SINE Alu 137 296 -16 30 0 0 0 chr17 38305287 38305317 -47133163 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 38305400 38305420 -47133060 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 684 134 0 0 chr17 38305433 38305530 -47132950 - AluJ/FLAM SINE Alu -214 98 2 2008 124 0 0 chr17 38305545 38305851 -47132629 - AluSx SINE Alu 0 306 1 1864 129 25 0 chr17 38306160 38306469 -47132011 + AluSq SINE Alu 1 316 0 1523 162 42 25 chr17 38306894 38307178 -47131302 + AluJo SINE Alu 1 289 -23 319 355 61 10 chr17 38307407 38307604 -47130876 + MIR SINE MIR 2 208 -54 2254 93 0 7 chr17 38307689 38307999 -47130481 - AluY SINE Alu -3 308 1 420 227 23 38 chr17 38308375 38308507 -47129973 - MIR SINE MIR -1 261 132 192 214 0 0 chr17 38308632 38308688 -47129792 + C-rich Low_complexity Low_complexity 1 56 0 525 209 0 27 chr17 38308751 38308861 -47129619 - AluJb SINE Alu -30 282 176 22 35 0 0 chr17 38308865 38308894 -47129586 + AT_rich Low_complexity Low_complexity 1 29 0 1926 161 3 0 chr17 38309216 38309527 -47128953 - AluJo SINE Alu 0 312 1 360 0 0 0 chr17 38309572 38309612 -47128868 + (CA)n Simple_repeat Simple_repeat 1 40 0 945 236 62 83 chr17 38309671 38309901 -47128579 - L1ME4a LINE L1 -211 5910 5677 7995 13 0 0 chr17 38309901 38310992 -47127488 - L1PA3 LINE L1 0 6155 5071 945 236 62 83 chr17 38310992 38311075 -47127405 - L1ME4a LINE L1 -444 5677 5594 1905 98 69 0 chr17 38311075 38311351 -47127129 - AluSg SINE Alu -15 295 1 945 236 62 83 chr17 38311351 38311679 -47126801 - L1ME4a LINE L1 -527 5594 5256 768 154 0 8 chr17 38311947 38312070 -47126410 + FLAM_A SINE Alu 1 122 -11 33 0 0 0 chr17 38312070 38312103 -47126377 + AT_rich Low_complexity Low_complexity 1 33 0 339 100 17 0 chr17 38312200 38312260 -47126220 + Alu SINE Alu 242 302 0 397 200 61 35 chr17 38312293 38312408 -47126072 + FLAM_C SINE Alu 1 118 -15 4162 108 49 47 chr17 38312667 38313377 -47125103 + Tigger3b DNA MER2_type 2 713 -518 2143 110 3 0 chr17 38313377 38313677 -47124803 + AluSx SINE Alu 1 301 -11 460 277 91 16 chr17 38314201 38314409 -47124071 + MIR SINE MIR 38 262 0 234 0 0 0 chr17 38317731 38317757 -47120723 + (A)n Simple_repeat Simple_repeat 1 26 0 547 206 61 73 chr17 38318498 38318690 -47119790 + MIR3 SINE MIR 4 197 -11 22 0 0 0 chr17 38319440 38319462 -47119018 + GC_rich Low_complexity Low_complexity 1 22 0 26 74 0 0 chr17 38319620 38319674 -47118806 + GC_rich Low_complexity Low_complexity 1 54 0 32 0 0 0 chr17 38319850 38319882 -47118598 + GC_rich Low_complexity Low_complexity 1 32 0 200 205 51 0 chr17 38321010 38321049 -47117431 + L2 LINE L2 3208 3248 -24 2306 90 0 6 chr17 38321193 38321505 -47116975 - AluSg SINE Alu 0 310 1 188 227 0 62 chr17 38321512 38321577 -47116903 + L2 LINE L2 2915 2977 -300 183 250 0 0 chr17 38321770 38321810 -47116670 + L2 LINE L2 3271 3310 -3 976 123 5 96 chr17 38321872 38321969 -47116511 + AluJb SINE Alu 135 208 -104 1308 155 66 69 chr17 38321969 38322148 -47116332 - AluJo SINE Alu 0 302 123 2204 85 0 3 chr17 38322148 38322442 -47116038 + AluSg SINE Alu 1 293 -17 1308 155 66 69 chr17 38322442 38322565 -47115915 - AluJo SINE Alu -179 123 1 976 123 5 96 chr17 38322565 38322654 -47115826 + AluJb SINE Alu 208 304 -8 430 238 122 20 chr17 38322659 38322806 -47115674 + MIR SINE MIR 51 212 -50 2185 83 3 45 chr17 38322955 38323268 -47115212 + AluSp SINE Alu 1 300 -13 343 120 0 186 chr17 38324265 38324302 -47114178 + MIR SINE MIR 51 93 -115 2433 55 0 0 chr17 38324302 38324613 -47113867 + AluY SINE Alu 1 311 0 343 120 0 186 chr17 38324613 38324699 -47113781 + MIR SINE MIR 93 150 -58 193 260 20 0 chr17 38325588 38325638 -47112842 - L2 LINE L2 -1 3312 3262 333 325 168 14 chr17 38325745 38325782 -47112698 - MIR SINE MIR -19 243 213 1982 108 0 52 chr17 38325782 38326089 -47112391 - AluSx SINE Alu -21 291 1 333 325 168 14 chr17 38326089 38326260 -47112220 - MIR SINE MIR -49 213 3 2222 99 0 0 chr17 38327714 38328016 -47110464 - AluSq SINE Alu -11 302 1 2211 106 0 6 chr17 38328530 38328841 -47109639 - AluSx SINE Alu -3 309 1 2295 72 0 41 chr17 38329387 38329705 -47108775 + AluSp SINE Alu 1 305 -8 325 242 154 23 chr17 38330258 38330389 -47108091 + MIR3 SINE MIR 49 202 -6 317 259 9 89 chr17 38331185 38331297 -47107183 + MIR3 SINE MIR 82 184 -24 212 204 23 0 chr17 38331444 38331488 -47106992 + (CA)n Simple_repeat Simple_repeat 2 46 0 233 263 13 26 chr17 38331525 38331601 -47106879 - MIR3 SINE MIR -20 188 114 25 75 0 0 chr17 38331725 38331778 -47106702 + GC_rich Low_complexity Low_complexity 1 53 0 181 294 20 0 chr17 38333526 38333577 -47104903 + MIR SINE MIR 40 91 -117 346 285 70 19 chr17 38334132 38334290 -47104190 + MIR SINE MIR 8 173 -89 3811 112 0 19 chr17 38334308 38334842 -47103638 - MER1A DNA MER1_type -3 524 1 2244 104 3 3 chr17 38334884 38335193 -47103287 + AluSp SINE Alu 1 309 -4 453 187 33 0 chr17 38335671 38335762 -47102718 + MIR SINE MIR 34 127 -135 2339 85 10 0 chr17 38335766 38336073 -47102407 - AluY SINE Alu 0 311 2 2151 81 0 11 chr17 38336094 38336377 -47102103 - AluSg SINE Alu -30 280 1 180 195 0 24 chr17 38336379 38336420 -47102060 + MIR SINE MIR 125 164 -98 2229 113 0 0 chr17 38336643 38336954 -47101526 - AluSx SINE Alu -1 311 1 210 369 88 42 chr17 38336990 38337382 -47101098 - L2 LINE L2 -4 3268 2831 2217 88 0 3 chr17 38337382 38337678 -47100802 + AluSx SINE Alu 1 295 -17 210 369 88 42 chr17 38337678 38337726 -47100754 - L2 LINE L2 -441 2831 2787 402 239 11 0 chr17 38338080 38338168 -47100312 - L2 LINE L2 -333 2980 2892 825 83 0 0 chr17 38338351 38338460 -47100020 - AluSg/x SINE Alu -16 294 186 190 275 121 22 chr17 38339295 38339386 -47099094 + L2 LINE L2 3155 3254 -18 462 320 39 20 chr17 38339404 38339607 -47098873 - MIR SINE MIR -53 209 3 246 225 14 0 chr17 38340006 38340077 -47098403 - L1M4 LINE L1 -3044 3102 3031 1082 168 11 0 chr17 38340077 38340262 -47098218 - AluSg/x SINE Alu 0 312 126 210 71 0 0 chr17 38340388 38340416 -47098064 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 1543 160 4 26 chr17 38340417 38340686 -47097794 - AluSx SINE Alu -49 263 1 2121 103 10 0 chr17 38341619 38341909 -47096571 - AluSx SINE Alu -18 294 2 2249 67 0 51 chr17 38341922 38342236 -47096244 - AluY SINE Alu -13 298 1 522 322 30 0 chr17 38342679 38342881 -47095599 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 38342916 38342943 -47095537 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 702 152 0 0 chr17 38344999 38345104 -47093376 - AluJb SINE Alu -206 106 2 483 204 18 9 chr17 38345105 38345272 -47093208 - Tigger5 DNA MER2_type -2101 222 7 1558 185 21 11 chr17 38345336 38345623 -47092857 + AluJo SINE Alu 1 290 -22 185 315 0 0 chr17 38345646 38345700 -47092780 - L2 LINE L2 -35 3278 3225 1786 124 10 70 chr17 38346101 38346415 -47092065 + AluSx SINE Alu 1 295 -17 2211 93 7 0 chr17 38346415 38346706 -47091774 + AluSq SINE Alu 1 293 -20 2017 152 0 0 chr17 38346877 38347180 -47091300 + AluSp SINE Alu 1 303 -10 364 297 196 10 chr17 38347235 38347522 -47090958 - L2 LINE L2 -235 3078 2741 1875 144 7 0 chr17 38348369 38348661 -47089819 + AluJo SINE Alu 1 294 -18 2234 106 3 0 chr17 38348670 38348981 -47089499 + AluSp SINE Alu 1 312 -1 356 218 5 153 chr17 38350111 38350169 -47088311 + MIR3 SINE MIR 22 87 -121 2269 98 0 0 chr17 38350169 38350466 -47088014 - AluSx SINE Alu -12 300 4 356 218 5 153 chr17 38350466 38350609 -47087871 + MIR3 SINE MIR 87 193 -15 528 307 70 13 chr17 38353057 38353299 -47085181 + MIR SINE MIR 6 258 -4 253 360 50 10 chr17 38353415 38353515 -47084965 + MIR SINE MIR 43 146 -62 253 284 108 0 chr17 38353683 38353785 -47084695 - MIR SINE MIR -56 152 40 207 0 0 0 chr17 38354228 38354251 -47084229 + (TG)n Simple_repeat Simple_repeat 2 24 0 273 75 0 0 chr17 38354538 38354578 -47083902 + (GA)n Simple_repeat Simple_repeat 2 41 0 241 279 0 0 chr17 38356088 38356156 -47082324 + G-rich Low_complexity Low_complexity 2 69 0 225 65 0 0 chr17 38356829 38356860 -47081620 + (A)n Simple_repeat Simple_repeat 1 31 0 2232 78 13 23 chr17 38358297 38358605 -47079875 - AluY SINE Alu -6 305 1 1011 238 70 17 chr17 38359527 38359673 -47078807 + MER33 DNA MER1_type 6 143 -2442 1906 122 61 0 chr17 38359673 38359967 -47078513 - AluSx SINE Alu 0 312 1 1011 238 70 17 chr17 38359967 38360119 -47078361 + MER33 DNA MER1_type 143 320 -4 930 188 11 0 chr17 38361392 38361568 -47076912 - AluSg/x SINE Alu -1 309 132 1888 134 7 19 chr17 38361568 38361875 -47076605 - AluSq SINE Alu -10 303 1 1870 139 17 0 chr17 38362408 38362709 -47075771 + AluSx SINE Alu 1 306 -6 2197 113 0 0 chr17 38362709 38363018 -47075462 + AluSx SINE Alu 1 309 -3 2195 103 3 0 chr17 38363897 38364198 -47074282 + AluSx SINE Alu 1 302 -10 714 178 31 8 chr17 38364381 38364397 -47074083 - FLAM_C SINE Alu -169 133 119 225 0 0 0 chr17 38364397 38364422 -47074058 + (TG)n Simple_repeat Simple_repeat 2 26 0 714 178 31 8 chr17 38364422 38364534 -47073946 - FLAM_C SINE Alu -183 119 2 1907 141 9 31 chr17 38364555 38364874 -47073606 - AluJb SINE Alu 0 312 1 1253 162 5 9 chr17 38365273 38365489 -47072991 - AluJb SINE Alu -12 300 86 2174 101 3 3 chr17 38367489 38367796 -47070684 + AluSc SINE Alu 2 308 -1 2397 67 3 0 chr17 38369014 38369311 -47069169 - AluSg SINE Alu -12 298 1 2065 148 0 0 chr17 38369675 38369986 -47068494 + AluJo SINE Alu 1 311 -1 2085 102 0 11 chr17 38369986 38370271 -47068209 + AluSg SINE Alu 1 282 -28 195 42 0 0 chr17 38370714 38370738 -47067742 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 780 263 115 11 chr17 38370784 38371160 -47067320 - L1ME3A LINE L1 -211 5951 5536 2050 116 31 0 chr17 38371217 38371509 -47066971 + AluSg SINE Alu 3 303 -7 600 261 119 31 chr17 38371536 38371796 -47066684 - L1ME4a LINE L1 -3 6118 5836 1946 132 27 0 chr17 38371854 38372149 -47066331 - AluSx SINE Alu -9 303 1 2300 93 10 0 chr17 38373555 38373865 -47064615 - AluSp SINE Alu 0 313 1 2430 58 13 3 chr17 38373870 38374178 -47064302 - AluY SINE Alu 0 311 1 565 111 0 0 chr17 38374330 38374411 -47064069 + Tigger3(Golem) DNA MER2_type 13 93 -2936 1172 171 14 24 chr17 38374422 38374632 -47063848 + Tigger3(Golem) DNA MER2_type 2818 3025 -4 1670 181 0 0 chr17 38375108 38375400 -47063080 + AluJb SINE Alu 14 305 -7 1950 103 21 7 chr17 38375400 38375691 -47062789 + AluSx SINE Alu 1 295 -17 1039 147 12 0 chr17 38375691 38375854 -47062626 + AluSg/x SINE Alu 132 296 -14 403 130 39 0 chr17 38377002 38377079 -47061401 - L1MB4 LINE L1 0 6180 6101 180 0 0 0 chr17 38377140 38377160 -47061320 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 745 133 42 70 chr17 38377165 38377279 -47061201 - AluSg/x SINE Alu -57 253 142 2208 118 0 0 chr17 38377279 38377584 -47060896 - AluSx SINE Alu -7 305 1 745 133 42 70 chr17 38377584 38377612 -47060868 - AluSg/x SINE Alu -168 142 115 351 300 27 0 chr17 38377838 38377948 -47060532 + MIR3 SINE MIR 50 162 -46 1102 192 22 9 chr17 38377952 38378176 -47060304 - AluJo SINE Alu 0 312 86 814 149 0 8 chr17 38378194 38378328 -47060152 - AluJo SINE Alu -175 137 5 351 200 0 3 chr17 38378457 38378535 -47059945 + AluS SINE Alu 1 60 -243 1165 147 5 5 chr17 38378535 38378725 -47059755 + AluSg/x SINE Alu 113 302 -7 398 289 58 74 chr17 38379095 38379154 -47059326 + HAL1b LINE L1 1110 1168 -4953 1663 199 0 3 chr17 38379154 38379455 -47059025 + AluJo SINE Alu 1 300 -12 398 289 58 74 chr17 38379455 38379672 -47058808 + HAL1b LINE L1 1168 6121 0 33 56 0 0 chr17 38379729 38379783 -47058697 + AT_rich Low_complexity Low_complexity 1 54 0 1994 116 0 22 chr17 38379810 38380121 -47058359 - AluSx SINE Alu -8 304 1 227 211 42 105 chr17 38380917 38381012 -47057468 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38381117 38381212 -47057268 - MSR1 Satellite Satellite 0 111 23 227 211 42 105 chr17 38381237 38381332 -47057148 - MSR1 Satellite Satellite 0 111 23 1780 125 30 43 chr17 38381809 38382112 -47056368 + AluJb SINE Alu 1 299 -13 701 224 0 8 chr17 38382722 38382838 -47055642 + FLAM_C SINE Alu 1 117 -185 195 42 0 0 chr17 38382838 38382862 -47055618 + (TGAA)n Simple_repeat Simple_repeat 2 25 0 701 224 0 8 chr17 38382862 38382879 -47055601 + FLAM_C SINE Alu 117 133 -169 2108 104 10 0 chr17 38382916 38383213 -47055267 + AluSp SINE Alu 2 301 -12 1046 201 0 63 chr17 38383224 38383463 -47055017 + AluJo SINE Alu 1 224 -88 197 377 79 19 chr17 38384140 38384355 -47054125 + L2 LINE L2 2857 3084 -229 1047 218 32 0 chr17 38384550 38384766 -47053714 - MER58A DNA MER1_type 0 224 2 2150 110 3 3 chr17 38385040 38385339 -47053141 + AluSx SINE Alu 1 299 -13 566 223 223 6 chr17 38385418 38385593 -47052887 - MIR SINE MIR -15 247 35 186 352 57 19 chr17 38385673 38385778 -47052702 + L2 LINE L2 2867 2975 -338 1500 115 8 29 chr17 38385787 38386031 -47052449 + AluJo SINE Alu 66 304 -8 2244 90 10 0 chr17 38386291 38386592 -47051888 - AluSc SINE Alu -5 304 1 412 300 110 26 chr17 38386665 38386975 -47051505 - L1M4 LINE L1 -1833 4313 3978 2311 71 0 3 chr17 38386980 38387274 -47051206 + AluSc SINE Alu 1 293 -16 2046 100 0 17 chr17 38387274 38387573 -47050907 + AluSc SINE Alu 1 294 -15 781 144 0 8 chr17 38387574 38387692 -47050788 - AluJo/FLAM SINE Alu -195 117 1 267 281 60 0 chr17 38387699 38387821 -47050659 - L1P LINE L1 -2477 3669 3547 2376 83 3 0 chr17 38387823 38388135 -47050345 + AluSp SINE Alu 1 313 0 1727 175 0 16 chr17 38388715 38389018 -47049462 - AluJb SINE Alu -14 298 1 2167 90 16 13 chr17 38389746 38390058 -47048422 + AluSq SINE Alu 1 313 0 2725 119 39 2 chr17 38390411 38390824 -47047656 + MSTA LTR MaLR 1 428 0 759 124 7 97 chr17 38391520 38391665 -47046815 - FLAM_C SINE Alu -1 132 1 1227 176 110 15 chr17 38391731 38392003 -47046477 - AluJb SINE Alu -14 298 1 392 296 151 11 chr17 38392041 38392227 -47046253 + MIR SINE MIR 45 256 -6 2114 113 7 0 chr17 38392614 38392914 -47045566 + AluSp SINE Alu 1 302 -11 1391 140 8 25 chr17 38393190 38393426 -47045054 - AluJo SINE Alu -80 232 1 1043 174 15 64 chr17 38393609 38393690 -47044790 - Charlie5 DNA MER1_type 0 2624 2541 2349 88 0 0 chr17 38393690 38393997 -47044483 + AluSc SINE Alu 1 307 -2 1043 174 15 64 chr17 38393997 38394088 -47044392 - Charlie5 DNA MER1_type -83 2541 2467 1416 176 83 0 chr17 38394088 38394366 -47044114 - AluJb SINE Alu -11 301 1 1043 174 15 64 chr17 38394366 38394457 -47044023 - Charlie5 DNA MER1_type -157 2467 2373 1289 121 54 31 chr17 38394607 38394831 -47043649 - AluSg/x SINE Alu -11 299 71 252 229 0 33 chr17 38394834 38394895 -47043585 + AluSq/x SINE Alu 76 134 -169 2268 76 0 0 chr17 38394898 38395186 -47043294 + AluSg SINE Alu 1 288 -22 603 126 0 0 chr17 38395423 38395510 -47042970 + AluSg/x SINE Alu 212 298 -11 1574 133 63 3 chr17 38395634 38395905 -47042575 + MER33 DNA MER1_type 1 284 -40 2181 117 0 0 chr17 38395909 38396247 -47042233 + AluSx SINE Alu 5 342 0 272 204 0 0 chr17 38396252 38396306 -47042174 + MER33 DNA MER1_type 309 362 -1 1708 161 7 3 chr17 38396422 38396713 -47041767 - AluJo SINE Alu -20 292 1 2159 94 17 0 chr17 38397009 38397307 -47041173 - AluSg SINE Alu -7 303 1 2249 101 0 0 chr17 38397366 38397663 -47040817 + AluSg SINE Alu 1 297 -13 316 169 0 0 chr17 38398091 38398150 -47040330 - LTR54 LTR ERV1 -49 461 403 398 170 185 52 chr17 38398176 38398311 -47040169 - MER105 DNA DNA -22 182 30 275 118 141 0 chr17 38399041 38399126 -47039354 - L1ME4a LINE L1 -10 6111 6015 838 175 39 0 chr17 38399154 38399308 -47039172 + AluJb SINE Alu 137 296 -16 30 0 0 0 chr17 38399363 38399393 -47039087 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr17 38399476 38399496 -47038984 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 684 134 0 0 chr17 38399509 38399606 -47038874 - AluJ/FLAM SINE Alu -214 98 2 2008 124 0 0 chr17 38399621 38399927 -47038553 - AluSx SINE Alu 0 306 1 1864 129 25 0 chr17 38400236 38400545 -47037935 + AluSq SINE Alu 1 316 0 1523 162 42 25 chr17 38400970 38401254 -47037226 + AluJo SINE Alu 1 289 -23 319 355 61 10 chr17 38401483 38401680 -47036800 + MIR SINE MIR 2 208 -54 2254 93 0 7 chr17 38401765 38402075 -47036405 - AluY SINE Alu -3 308 1 867 206 18 96 chr17 38402451 38402618 -47035862 - MIR SINE MIR -1 261 121 2497 56 0 0 chr17 38402618 38402921 -47035559 + AluY SINE Alu 1 303 -8 867 206 18 96 chr17 38402921 38403025 -47035455 - MIR SINE MIR -141 121 11 885 118 0 22 chr17 38403036 38403171 -47035309 - FLAM_C SINE Alu 0 133 2 2173 111 3 0 chr17 38403202 38403500 -47034980 + AluSp SINE Alu 1 299 -14 382 307 93 57 chr17 38403544 38403844 -47034636 + L3 LINE CR1 971 1281 -296 282 253 117 45 chr17 38403916 38404038 -47034442 + MER5B DNA MER1_type 1 138 -40 2004 107 10 10 chr17 38404038 38404336 -47034144 + AluSq SINE Alu 1 298 -15 282 253 117 45 chr17 38404336 38404367 -47034113 + MER5B DNA MER1_type 138 165 -13 299 298 21 0 chr17 38404438 38404532 -47033948 + MER5B DNA MER1_type 9 104 -74 343 339 27 54 chr17 38404605 38404971 -47033509 - L2 LINE L2 -524 2790 2369 415 323 37 6 chr17 38405221 38405382 -47033098 + L2 LINE L2 2617 2782 -532 716 226 28 60 chr17 38405388 38405605 -47032875 + MIR SINE MIR 32 241 -21 220 198 198 0 chr17 38405691 38405772 -47032708 + L2 LINE L2 2862 2958 -314 212 313 0 16 chr17 38405779 38405843 -47032637 - MIR SINE MIR -198 64 2 * 435 239 15 104 chr17 38405843 38405969 -47032511 + L2 LINE L2 3199 3312 -1 1791 149 0 27 chr17 38406295 38406591 -47031889 - AluJb SINE Alu -24 288 1 1506 108 0 0 chr17 38407419 38407622 -47030858 - AluSq SINE Alu -110 203 1 1403 239 118 18 chr17 38407881 38408373 -47030107 + MLT1G LTR MaLR 2 590 0 2279 100 0 0 chr17 38408484 38408794 -47029686 - AluSg SINE Alu 0 310 1 1738 249 38 59 chr17 38408818 38409229 -47029251 + L2 LINE L2 2151 2548 -766 2001 148 0 0 chr17 38409229 38409534 -47028946 + AluSx SINE Alu 1 305 -7 1738 249 38 59 chr17 38409534 38409697 -47028783 + L2 LINE L2 2548 2713 -601 2142 104 0 3 chr17 38409703 38410011 -47028469 + AluSx SINE Alu 6 312 0 1081 133 6 22 chr17 38410012 38410193 -47028287 + AluSg/x SINE Alu 118 295 -15 727 234 258 31 chr17 38410197 38410686 -47027794 + L2 LINE L2 2710 3312 -1 769 176 15 0 chr17 38410897 38411028 -47027452 + FLAM_A SINE Alu 1 133 0 1670 138 0 0 chr17 38411291 38411561 -47026919 - AluSx SINE Alu 0 308 39 3227 84 4 34 chr17 38411578 38411919 -47026561 - L1PA14 LINE L1 0 6161 5835 1962 100 11 4 chr17 38411919 38412226 -47026254 + AluSg SINE Alu 1 309 0 3227 84 4 34 chr17 38412226 38412357 -47026123 - L1PA14 LINE L1 -326 5835 5702 1567 171 13 44 chr17 38412478 38412794 -47025686 - AluJo SINE Alu 0 312 7 1823 114 71 0 chr17 38412810 38413091 -47025389 - AluSx SINE Alu -11 301 1 2268 61 0 58 chr17 38413091 38413403 -47025077 - AluSx SINE Alu -18 294 1 1620 128 86 21 chr17 38413458 38413748 -47024732 - AluSx SINE Alu -3 309 1 379 205 26 0 chr17 38413764 38413842 -47024638 - L1MEd LINE L1 -6037 82 3 657 308 23 52 chr17 38413844 38414191 -47024289 - L2 LINE L2 -753 2561 2225 2137 94 0 16 chr17 38414228 38414535 -47023945 + AluSp SINE Alu 1 302 -11 1947 116 0 30 chr17 38414539 38414840 -47023640 + AluSq SINE Alu 1 292 -21 4052 143 51 12 chr17 38414855 38415540 -47022940 + L1MC2 LINE L1 5442 6153 -191 838 243 0 0 chr17 38415540 38415713 -47022767 + FRAM SINE Alu 1 173 -3 962 168 42 0 chr17 38415719 38415909 -47022571 + L1MC2 LINE L1 6132 6329 -15 2080 114 10 3 chr17 38415909 38416217 -47022263 + AluSq SINE Alu 1 310 -3 1273 131 5 0 chr17 38416219 38416418 -47022062 + AluSg/x SINE Alu 109 308 -2 25 0 0 0 chr17 38416421 38416446 -47022034 + AT_rich Low_complexity Low_complexity 1 25 0 2422 44 14 0 chr17 38416447 38416742 -47021738 + AluY SINE Alu 1 299 -12 2294 98 0 7 chr17 38417165 38417472 -47021008 + AluSq SINE Alu 1 305 -8 275 183 268 63 chr17 38417553 38417695 -47020785 - MIR SINE MIR -86 176 6 30 27 0 0 chr17 38418347 38418384 -47020096 + AT_rich Low_complexity Low_complexity 1 37 0 2195 100 3 3 chr17 38418389 38418700 -47019780 + AluSp SINE Alu 3 313 0 2217 103 0 0 chr17 38418711 38419012 -47019468 + AluSg SINE Alu 1 301 -9 948 194 11 0 chr17 38419026 38419206 -47019274 + Charlie1 DNA MER1_type 1834 2015 -746 1527 82 0 0 chr17 38419208 38419404 -47019076 + AluSc SINE Alu 101 296 -13 2243 86 0 0 chr17 38419406 38419698 -47018782 + AluY SINE Alu 1 292 -19 888 135 147 0 chr17 38420074 38420230 -47018250 - AluSg/x SINE Alu -4 306 128 1292 84 0 0 chr17 38420824 38420991 -47017489 - AluSg/x SINE Alu -9 301 135 2003 125 13 3 chr17 38421085 38421388 -47017092 - AluSx SINE Alu -6 306 1 1967 97 42 7 chr17 38422875 38423164 -47015316 - AluSg SINE Alu -11 299 1 2206 91 0 13 chr17 38423223 38423530 -47014950 - AluSx SINE Alu -9 303 1 1107 185 10 0 chr17 38423559 38423764 -47014716 + AluJo SINE Alu 86 292 -20 553 369 53 4 chr17 38423771 38424015 -47014465 - MIR SINE MIR 0 262 7 2342 56 0 23 chr17 38424285 38424590 -47013890 + AluY SINE Alu 1 298 -13 195 322 68 48 chr17 38424868 38425014 -47013466 + L2 LINE L2 2887 3035 -237 783 254 125 9 chr17 38425084 38425308 -47013172 - MIR SINE MIR 0 262 13 2307 80 10 0 chr17 38425485 38425784 -47012696 - AluY SINE Alu -9 302 1 1954 113 0 0 chr17 38425924 38426198 -47012282 - AluSx SINE Alu -38 274 1 927 96 0 37 chr17 38426208 38426344 -47012136 - FLAM_C SINE Alu -2 131 1 187 279 0 0 chr17 38426879 38426922 -47011558 + MIR SINE MIR 205 247 -15 2194 46 4 7 chr17 38426950 38427270 -47011210 - AluY SINE Alu 0 320 2 1850 141 0 3 chr17 38427399 38427689 -47010791 - AluJb SINE Alu -15 297 9 330 200 0 0 chr17 38427822 38427877 -47010603 + MER3 DNA MER1_type 2 56 -153 2123 120 0 0 chr17 38428068 38428367 -47010113 + AluSx SINE Alu 1 299 -13 2282 87 0 3 chr17 38428842 38429141 -47009339 + AluSg SINE Alu 3 300 -10 238 261 92 69 chr17 38429180 38429310 -47009170 + MIR SINE MIR 55 187 -75 197 128 0 26 chr17 38429337 38429376 -47009104 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 529 211 19 0 chr17 38429431 38429535 -47008945 - FLAM_A SINE Alu -36 106 1 1752 108 12 15 chr17 38433527 38433615 -47004865 + AluSg SINE Alu 44 131 -179 2201 107 0 0 chr17 38433615 38433914 -47004566 + AluSq SINE Alu 1 299 -14 1752 108 12 15 chr17 38433914 38434084 -47004396 + AluSg SINE Alu 131 301 -9 2052 110 45 0 chr17 38434155 38434446 -47004034 - AluSq SINE Alu -9 304 1 1538 187 26 30 chr17 38434472 38434777 -47003703 + AluJo SINE Alu 1 304 -8 2391 68 10 7 chr17 38434801 38435109 -47003371 + AluSq SINE Alu 1 309 -4 2017 138 0 0 chr17 38435195 38435491 -47002989 + AluSx SINE Alu 1 296 -16 306 375 46 29 chr17 38435512 38435752 -47002728 + L2 LINE L2 2852 3095 -177 725 256 24 49 chr17 38435831 38436077 -47002403 - MIR SINE MIR 0 262 23 24 0 0 0 chr17 38436184 38436208 -47002272 + AT_rich Low_complexity Low_complexity 1 24 0 2127 100 3 0 chr17 38436215 38436504 -47001976 + AluSx SINE Alu 1 290 -22 725 205 42 96 chr17 38436510 38436749 -47001731 - MIR SINE MIR 0 262 37 383 103 0 0 chr17 38436776 38436834 -47001646 - LTR26B LTR ERV1 -473 58 1 2363 76 0 10 chr17 38437167 38437481 -47000999 - AluY SINE Alu 0 311 1 829 160 23 74 chr17 38437481 38437648 -47000832 - AluSg/x SINE Alu -16 294 135 188 277 134 17 chr17 38437762 38437881 -47000599 + L2 LINE L2 2827 2959 -313 2202 118 0 6 chr17 38438010 38438323 -47000157 - AluSx SINE Alu -1 311 1 2085 94 3 62 chr17 38438323 38438643 -46999837 - AluSx SINE Alu -11 301 1 1438 163 3 113 chr17 38438646 38438983 -46999497 - AluJb SINE Alu -1 301 2 1994 57 0 60 chr17 38439392 38439674 -46998806 - AluY SINE Alu -9 302 38 403 227 10 18 chr17 38439801 38439927 -46998553 + MIR SINE MIR 32 153 -63 1046 83 0 0 chr17 38440018 38440150 -46998330 + AluSp SINE Alu 1 132 -181 2047 103 7 7 chr17 38440152 38440452 -46998028 + AluSq SINE Alu 1 300 -13 348 262 47 0 chr17 38440457 38440564 -46997916 + MIR SINE MIR 151 262 0 2342 77 3 0 chr17 38440844 38441142 -46997338 - AluSp SINE Alu -1 312 14 451 103 29 0 chr17 38441146 38441214 -46997266 + AluSg/x SINE Alu 218 287 -22 412 93 0 0 chr17 38441217 38441271 -46997209 + Alu SINE Alu 3 56 -254 702 152 0 0 chr17 38441514 38441619 -46996861 - AluJb SINE Alu -206 106 2 506 214 298 12 chr17 38441620 38441788 -46996692 - Tigger5 DNA MER2_type -2101 222 7 1520 186 25 7 chr17 38441852 38442137 -46996343 + AluJo SINE Alu 1 290 -22 190 406 0 0 chr17 38442159 38442260 -46996220 - L2 LINE L2 -34 3238 3138 1786 124 10 70 chr17 38442614 38442928 -46995552 + AluSx SINE Alu 1 295 -17 2103 90 7 10 chr17 38442928 38443218 -46995262 + AluSq SINE Alu 1 289 -24 674 252 0 0 chr17 38443236 38443367 -46995113 + FLAM_C SINE Alu 2 132 -1 815 38 22 60 chr17 38443695 38444013 -46994467 + (CA)n Simple_repeat Simple_repeat 1 305 0 343 294 92 0 chr17 38444082 38444201 -46994279 + L2 LINE L2 3137 3266 -6 450 346 30 0 chr17 38445547 38445749 -46992731 - MIR SINE MIR -21 241 34 182 37 37 0 chr17 38445784 38445811 -46992669 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 2279 103 0 3 chr17 38447946 38448257 -46990223 + AluSx SINE Alu 1 310 -2 1762 183 0 0 chr17 38448268 38448563 -46989917 + AluJo SINE Alu 1 295 -17 243 277 73 66 chr17 38448563 38448700 -46989780 + L1MC4a LINE L1 5633 5770 -2038 275 281 210 14 chr17 38448701 38448982 -46989498 + L1MC4a LINE L1 5830 6165 -1643 2322 66 7 3 chr17 38450241 38450546 -46987934 - AluSp SINE Alu -3 310 5 2058 122 16 0 chr17 38450552 38450856 -46987624 - AluSx SINE Alu -3 309 1 380 259 65 9 chr17 38450899 38451007 -46987473 - MER5A DNA MER1_type -68 121 8 1643 152 65 0 chr17 38452052 38452329 -46986151 - AluJo SINE Alu -15 297 3 1665 143 47 40 chr17 38452420 38452536 -46985944 + AluJo SINE Alu 1 115 -197 186 43 0 0 chr17 38452536 38452559 -46985921 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1665 143 47 40 chr17 38452559 38452742 -46985738 + AluJo SINE Alu 115 302 -10 2322 64 0 7 chr17 38452742 38453038 -46985442 + AluY SINE Alu 1 294 -17 1731 138 35 0 chr17 38453247 38453555 -46984925 - AluSx SINE Alu 0 312 1 2113 97 4 0 chr17 38453583 38453862 -46984618 + AluSc SINE Alu 1 280 -29 207 100 0 0 chr17 38453862 38453892 -46984588 + (TAAG)n Simple_repeat Simple_repeat 2 31 0 342 0 0 0 chr17 38454249 38454287 -46984193 + (TG)n Simple_repeat Simple_repeat 1 38 0 2014 128 13 0 chr17 38454602 38454900 -46983580 + AluSx SINE Alu 1 302 -10 2304 97 3 3 chr17 38454900 38455211 -46983269 + AluSp SINE Alu 1 311 -2 424 272 49 49 chr17 38455325 38455385 -46983095 - L2 LINE L2 -97 3216 3157 1960 98 3 80 chr17 38455385 38455712 -46982768 + AluSx SINE Alu 1 302 -10 424 272 49 49 chr17 38455712 38455835 -46982645 - L2 LINE L2 -155 3158 3033 1369 191 51 0 chr17 38455837 38456136 -46982344 - AluJo SINE Alu 0 323 12 520 323 56 5 chr17 38456147 38456342 -46982138 - L2 LINE L2 -277 3036 2832 378 255 16 138 chr17 38456378 38456444 -46982036 - L1ME4a LINE L1 -199 5922 5850 2235 91 0 10 chr17 38456444 38456741 -46981739 + AluSx SINE Alu 1 294 -18 378 255 16 138 chr17 38456741 38456863 -46981617 - L1ME4a LINE L1 -271 5850 5768 1854 157 3 0 chr17 38456863 38457156 -46981324 + AluJo SINE Alu 3 296 -16 378 255 16 138 chr17 38457156 38457213 -46981267 - L1ME4a LINE L1 -353 5768 5706 670 282 50 64 chr17 38457726 38457848 -46980632 - L3 LINE CR1 -11 1566 1444 2133 117 7 0 chr17 38457848 38458148 -46980332 + AluSx SINE Alu 1 302 -10 670 282 50 64 chr17 38458148 38458323 -46980157 - L3 LINE CR1 -133 1444 1273 1814 148 17 3 chr17 38458534 38458831 -46979649 + AluSx SINE Alu 1 301 -11 321 68 0 0 chr17 38460211 38460255 -46978225 + (TG)n Simple_repeat Simple_repeat 2 45 0 809 61 0 0 chr17 38462840 38462939 -46975541 - AluY SINE Alu -219 99 1 31 0 0 0 chr17 38463158 38463189 -46975291 + AT_rich Low_complexity Low_complexity 1 31 0 1266 77 29 0 chr17 38463189 38463359 -46975121 - AluSq SINE Alu -138 175 1 338 284 52 0 chr17 38463499 38463633 -46974847 + L1MB7 LINE L1 5893 6033 -151 2015 117 6 25 chr17 38463638 38463955 -46974525 - AluSx SINE Alu -1 311 1 477 0 0 0 chr17 38463968 38464021 -46974459 + (TTTTA)n Simple_repeat Simple_repeat 3 55 0 257 186 0 0 chr17 38464024 38464067 -46974413 - MER57A LTR ERV1 -65 338 296 634 136 79 7 chr17 38464067 38464207 -46974273 + L1MB8 LINE L1 6024 6173 -5 1648 162 6 41 chr17 38464210 38464524 -46973956 + AluJo SINE Alu 1 303 -9 1428 134 14 9 chr17 38464720 38464943 -46973537 + AluJo SINE Alu 84 307 -5 445 169 12 0 chr17 38464948 38465031 -46973449 + MER67C LTR ERV1 361 444 -266 * 1547 153 24 44 chr17 38465015 38465032 -46973448 + MER67C LTR ERV1 343 359 -351 2166 93 7 29 chr17 38465032 38465342 -46973138 + AluSq SINE Alu 1 303 -10 1547 153 24 44 chr17 38465342 38465429 -46973051 + MER67C LTR ERV1 359 446 -264 2320 107 0 0 chr17 38465429 38465739 -46972741 + AluSx SINE Alu 1 310 -2 1547 153 24 44 chr17 38465739 38465965 -46972515 + MER67C LTR ERV1 446 669 -41 2217 107 10 0 chr17 38465965 38466275 -46972205 - AluSq SINE Alu 0 313 1 1826 155 13 0 chr17 38466832 38467135 -46971345 - AluJo SINE Alu -5 307 1 510 269 7 28 chr17 38467142 38467287 -46971193 - MIR SINE MIR -90 172 31 255 103 0 0 chr17 38467455 38467494 -46970986 + (CTG)n Simple_repeat Simple_repeat 3 41 0 235 288 113 25 chr17 38468866 38468974 -46969506 - MIR SINE MIR -54 208 111 2124 129 3 0 chr17 38468974 38469277 -46969203 + AluSx SINE Alu 1 304 -8 1981 119 7 7 chr17 38469277 38469572 -46968908 + AluSx SINE Alu 1 295 -17 235 288 113 25 chr17 38469572 38469622 -46968858 - MIR SINE MIR -150 112 35 1153 262 78 24 chr17 38471609 38471979 -46966501 + LTR16C LTR ERVL 89 478 -13 764 183 15 0 chr17 38472512 38472643 -46965837 + FLAM_A SINE Alu 1 133 0 256 319 128 7 chr17 38472978 38473119 -46965361 + L2 LINE L2 3095 3252 -20 2191 121 0 3 chr17 38473128 38473442 -46965038 + AluSq SINE Alu 1 313 0 1405 187 45 10 chr17 38473628 38473917 -46964563 + AluJo SINE Alu 1 299 -13 2504 45 10 0 chr17 38473918 38474226 -46964254 + AluY SINE Alu 1 311 0 423 206 0 0 chr17 38474241 38474254 -46964226 + GA-rich Low_complexity Low_complexity 3 15 -89 2354 93 3 0 chr17 38474254 38474566 -46963914 + AluSp SINE Alu 1 313 0 423 206 0 0 chr17 38474566 38474654 -46963826 + GA-rich Low_complexity Low_complexity 14 104 0 1837 153 6 31 chr17 38474662 38474983 -46963497 + AluSq SINE Alu 1 313 0 373 322 69 23 chr17 38475862 38476036 -46962444 - MIR SINE MIR -2 260 79 192 289 69 81 chr17 38476253 38476426 -46962054 - L2 LINE L2 -189 3083 2913 219 69 0 0 chr17 38476527 38476556 -46961924 + (CTG)n Simple_repeat Simple_repeat 3 31 0 1236 150 181 19 chr17 38477282 38477542 -46960938 + AluJo SINE Alu 1 302 0 476 58 0 14 chr17 38477558 38477627 -46960853 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2748 121 25 16 chr17 38477934 38478374 -46960106 + MLT1C LTR MaLR 24 467 0 2084 126 0 0 chr17 38478395 38478740 -46959740 + AluSx SINE Alu 1 312 0 330 250 207 6 chr17 38479194 38479360 -46959120 - MIR SINE MIR -59 203 5 21 82 0 0 chr17 38479997 38480046 -46958434 + GC_rich Low_complexity Low_complexity 1 49 0 803 206 153 5 chr17 38481502 38481711 -46956769 - MIR SINE MIR -21 241 2 438 280 70 19 chr17 38482295 38482452 -46956028 + MIR3 SINE MIR 21 185 -23 1792 117 9 66 chr17 38483537 38483687 -46954793 + AluJo SINE Alu 1 125 -187 2223 86 17 0 chr17 38483687 38483977 -46954503 + AluSp SINE Alu 1 295 -18 1792 117 9 66 chr17 38483977 38484143 -46954337 + AluJo SINE Alu 125 299 -13 2268 119 3 0 chr17 38484213 38484524 -46953956 + AluSx SINE Alu 1 312 0 243 313 0 0 chr17 38485556 38485620 -46952860 - L2 LINE L2 -2 3311 3248 226 361 83 8 chr17 38485752 38485885 -46952595 - L2 LINE L2 -5 3267 3125 186 301 91 51 chr17 38486050 38486226 -46952254 - L2 LINE L2 -208 3064 2882 423 282 64 13 chr17 38486699 38486855 -46951625 - MIR SINE MIR -48 214 51 1067 134 12 6 chr17 38486863 38487035 -46951445 + AluSc SINE Alu 83 255 -54 2376 62 16 7 chr17 38487035 38487342 -46951138 + AluY SINE Alu 1 310 -1 535 256 70 83 chr17 38488277 38488453 -46950027 + MIR SINE MIR 9 183 -79 414 0 0 0 chr17 38488453 38488499 -46949981 + (TG)n Simple_repeat Simple_repeat 2 47 0 535 256 70 83 chr17 38488499 38488564 -46949916 + MIR SINE MIR 183 247 -15 1790 94 117 8 chr17 38488564 38488830 -46949650 + AluSc SINE Alu 1 295 -14 260 257 100 0 chr17 38489513 38489583 -46948897 - L2 LINE L2 -294 2978 2902 * 523 352 78 28 chr17 38489579 38490159 -46948321 + L2 LINE L2 2365 2973 -341 279 336 172 0 chr17 38490385 38490501 -46947979 + L2 LINE L2 3117 3252 -20 208 200 0 0 chr17 38490980 38491025 -46947455 - MIR SINE MIR -75 133 89 214 191 43 0 chr17 38491050 38491097 -46947383 - L2 LINE L2 -3 3269 3221 211 301 11 43 chr17 38491167 38491260 -46947220 + L2 LINE L2 3159 3248 -24 2105 129 0 0 chr17 38491656 38491959 -46946521 + AluSx SINE Alu 1 303 -9 2430 81 0 0 chr17 38491966 38492276 -46946204 + AluY SINE Alu 2 311 0 1981 155 0 0 chr17 38492362 38492672 -46945808 - AluSg SINE Alu 0 310 1 362 326 50 7 chr17 38492737 38492878 -46945602 - L2 LINE L2 -5 3267 3121 2273 119 3 0 chr17 38493470 38493781 -46944699 + AluSx SINE Alu 1 312 0 231 302 16 0 chr17 38494813 38494876 -46943604 - L2 LINE L2 -2 3311 3248 221 349 91 8 chr17 38495008 38495140 -46943340 - L2 LINE L2 -5 3267 3125 423 282 64 13 chr17 38495952 38496108 -46942372 - MIR SINE MIR -48 214 51 1067 134 12 6 chr17 38496116 38496288 -46942192 + AluSc SINE Alu 83 255 -54 2376 62 16 7 chr17 38496288 38496595 -46941885 + AluY SINE Alu 1 310 -1 535 256 70 83 chr17 38497530 38497706 -46940774 + MIR SINE MIR 9 183 -79 414 0 0 0 chr17 38497706 38497752 -46940728 + (TG)n Simple_repeat Simple_repeat 2 47 0 535 256 70 83 chr17 38497752 38497817 -46940663 + MIR SINE MIR 183 247 -15 1790 94 117 8 chr17 38497817 38498083 -46940397 + AluSc SINE Alu 1 295 -14 260 257 100 0 chr17 38498766 38498836 -46939644 - L2 LINE L2 -294 2978 2902 * 300 344 41 44 chr17 38498832 38499152 -46939328 + L2 LINE L2 2365 2683 -631 324 206 82 10 chr17 38499464 38499561 -46938919 - MIR SINE MIR -70 138 35 2308 102 0 9 chr17 38501265 38501580 -46936900 - AluSx SINE Alu 0 312 1 2211 95 13 0 chr17 38501580 38501882 -46936598 - AluSx SINE Alu -4 308 1 321 285 88 57 chr17 38503204 38503397 -46935083 - L2 LINE L2 -5 3308 3110 2137 123 0 0 chr17 38503487 38503780 -46934700 + AluSx SINE Alu 1 293 -19 1691 110 49 4 chr17 38504189 38504435 -46934045 + AluSx SINE Alu 56 312 0 532 287 94 5 chr17 38504445 38504647 -46933833 + MIR SINE MIR 37 256 -6 2322 84 6 6 chr17 38505151 38505462 -46933018 + AluY SINE Alu 1 311 0 359 294 110 7 chr17 38505469 38505605 -46932875 + MER5A DNA MER1_type 40 189 0 207 0 0 0 chr17 38506888 38506911 -46931569 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1668 176 6 32 chr17 38506915 38507227 -46931253 + AluJo SINE Alu 1 304 -8 296 229 28 107 chr17 38507229 38507429 -46931051 + Charlie8 DNA MER1_type 148 1406 -1011 261 246 103 15 chr17 38507433 38507588 -46930892 - MER5A DNA MER1_type -11 178 58 2271 96 3 3 chr17 38509068 38509380 -46929100 - AluSp SINE Alu -1 312 1 1649 82 143 4 chr17 38509630 38509908 -46928572 - AluSg1 SINE Alu 0 313 2 461 111 56 0 chr17 38510415 38510487 -46927993 - MADE1 DNA Mariner -4 76 1 792 161 0 0 chr17 38510508 38510632 -46927848 - FLAM_C SINE Alu -19 124 1 1845 155 14 0 chr17 38510834 38511131 -46927349 + AluSx SINE Alu 1 301 -11 1710 180 0 3 chr17 38511133 38511416 -46927064 - AluJo SINE Alu -30 282 1 2767 139 82 57 chr17 38511476 38512016 -46926464 + MLT2B3 LTR ERVL 1 553 -1 314 320 88 7 chr17 38512091 38512238 -46926242 + MLT1K LTR MaLR 216 374 -214 1937 134 3 0 chr17 38512238 38512545 -46925935 - AluSx SINE Alu 0 308 1 442 241 0 48 chr17 38512555 38512691 -46925789 - MLT1A2 LTR MaLR -216 158 28 1971 151 13 0 chr17 38512691 38512990 -46925490 + AluSx SINE Alu 2 304 -8 649 127 0 17 chr17 38513010 38513128 -46925352 + (GAAA)n Simple_repeat Simple_repeat 1 116 0 719 238 111 41 chr17 38513456 38513700 -46924780 + MIR SINE MIR 2 262 0 217 205 0 0 chr17 38513758 38513797 -46924683 + CT-rich Low_complexity Low_complexity 3 41 0 222 298 0 0 chr17 38514023 38514080 -46924400 + A-rich Low_complexity Low_complexity 5 61 0 954 168 0 0 chr17 38514467 38514622 -46923858 - FRAM SINE Alu -18 158 4 2013 122 0 44 chr17 38515015 38515334 -46923146 - AluSx SINE Alu -7 305 1 673 121 40 0 chr17 38516927 38517026 -46921454 + FLAM_C SINE Alu 14 116 -27 2345 68 6 3 chr17 38517070 38517381 -46921099 - AluSp SINE Alu -1 312 1 2189 114 0 7 chr17 38517766 38518073 -46920407 - AluSx SINE Alu -7 305 1 24 0 0 0 chr17 38519415 38519439 -46919041 + AT_rich Low_complexity Low_complexity 1 24 0 2211 109 3 6 chr17 38519876 38520189 -46918291 - AluSp SINE Alu -1 312 1 2217 109 0 3 chr17 38520189 38520491 -46917989 - AluSx SINE Alu -11 301 1 1971 156 3 0 chr17 38520492 38520799 -46917681 - AluJb SINE Alu -4 308 1 762 242 16 21 chr17 38521836 38522030 -46916450 + MER106A DNA MER1_type 1 193 -43 2095 87 63 0 chr17 38522030 38522316 -46916164 + AluSc SINE Alu 1 304 -5 1818 116 98 3 chr17 38522323 38522608 -46915872 + AluSx SINE Alu 1 312 0 847 134 0 8 chr17 38522673 38522800 -46915680 + AluJb SINE Alu 1 126 -186 1269 143 4 48 chr17 38523792 38524023 -46914457 - AluJo SINE Alu -7 305 85 2156 115 3 0 chr17 38524029 38524325 -46914155 - AluSx SINE Alu -13 299 3 1831 98 0 56 chr17 38524329 38524616 -46913864 - AluSx SINE Alu -14 298 28 1659 136 32 44 chr17 38524775 38525091 -46913389 + AluJb SINE Alu 1 312 0 2114 114 0 16 chr17 38525383 38525690 -46912790 - AluSx SINE Alu -8 304 3 715 214 8 0 chr17 38525903 38526029 -46912451 - FLAM_A SINE Alu -6 127 1 191 132 0 110 chr17 38526391 38526482 -46911998 + (TCCCC)n Simple_repeat Simple_repeat 2 82 0 584 303 39 6 chr17 38526742 38526920 -46911560 + MIR3 SINE MIR 15 198 -10 1951 145 10 6 chr17 38526922 38527233 -46911247 + AluJb SINE Alu 1 312 0 1462 111 32 161 chr17 38527456 38527577 -46910903 + AluJo SINE Alu 5 140 -162 2095 148 7 0 chr17 38527577 38527887 -46910593 + AluSx SINE Alu 1 312 0 1462 111 32 161 chr17 38527887 38528107 -46910373 + AluJo SINE Alu 140 302 0 2095 176 80 84 chr17 38528591 38528665 -46909815 + MER7C DNA MER2_type 2 75 -2953 1997 140 0 16 chr17 38528665 38528972 -46909508 + AluSx SINE Alu 1 302 -10 2095 176 80 84 chr17 38528972 38529232 -46909248 + MER7C DNA MER2_type 75 335 -2693 1624 101 0 5 chr17 38529232 38529450 -46909030 - AluSq SINE Alu -91 222 6 2095 176 80 84 chr17 38529450 38529718 -46908762 + MER7C DNA MER2_type 335 602 0 2459 68 3 0 chr17 38529720 38530027 -46908453 - AluSp SINE Alu -5 308 1 1634 148 18 7 chr17 38530090 38530374 -46908106 + L1MA4 LINE L1 6013 6299 -1 1823 160 0 29 chr17 38530413 38530725 -46907755 + AluJo SINE Alu 8 310 -2 2188 102 10 0 chr17 38530782 38530793 -46907687 - AluSx SINE Alu 0 312 303 247 62 0 0 chr17 38530793 38530825 -46907655 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2188 102 10 0 chr17 38530825 38531107 -46907373 - AluSx SINE Alu -9 303 1 306 0 0 0 chr17 38531379 38531413 -46907067 + (TG)n Simple_repeat Simple_repeat 2 35 0 222 91 0 0 chr17 38533934 38533967 -46904513 + (CACCC)n Simple_repeat Simple_repeat 5 37 0 1602 139 41 71 chr17 38535411 38535705 -46902775 - AluJb SINE Alu -25 287 3 1161 60 0 0 chr17 38535738 38535872 -46902608 + AluSg1 SINE Alu 1 134 -175 1800 86 74 4 chr17 38535872 38536115 -46902365 + AluSp SINE Alu 1 260 -53 266 176 0 73 chr17 38536233 38536301 -46902179 + AluYb8 SINE Alu 246 308 0 529 295 20 7 chr17 38536468 38536617 -46901863 - MIR3 SINE MIR -41 167 17 2274 112 0 16 chr17 38537255 38537569 -46900911 - AluSc SINE Alu 0 309 1 243 119 0 0 chr17 38537569 38537611 -46900869 - AluJb SINE Alu -3 298 257 1531 140 0 0 chr17 38537611 38537825 -46900655 - AluJb SINE Alu -87 225 12 1023 149 17 29 chr17 38537831 38538005 -46900475 - AluJb SINE Alu -3 309 138 2247 88 0 46 chr17 38538300 38538460 -46900020 - AluSx SINE Alu -19 293 152 2413 84 0 0 chr17 38538460 38538756 -46899724 - AluY SINE Alu -15 296 1 2247 88 0 46 chr17 38538756 38538902 -46899578 - AluSx SINE Alu -160 152 1 2254 124 0 0 chr17 38538968 38539267 -46899213 - AluSq SINE Alu -14 299 1 374 262 154 0 chr17 38539321 38539470 -46899010 - L1MC4a LINE L1 -1897 5911 5740 1976 149 0 43 chr17 38539521 38539843 -46898637 - AluJb SINE Alu -4 308 1 1965 106 74 3 chr17 38540531 38540815 -46897665 - AluSq SINE Alu -9 304 1 2150 85 53 0 chr17 38540815 38541096 -46897384 - AluSx SINE Alu -16 296 1 1646 189 7 33 chr17 38541106 38541412 -46897068 - AluJb SINE Alu -14 298 1 1514 139 0 0 chr17 38542194 38542417 -46896063 + AluJb SINE Alu 84 306 -6 515 138 224 0 chr17 38542444 38542560 -46895920 - FLAM_C SINE Alu 0 143 2 2079 141 3 31 chr17 38542695 38543015 -46895465 - AluJb SINE Alu -1 311 1 489 156 222 0 chr17 38543027 38543117 -46895363 - FLAM_C SINE Alu -19 124 15 480 156 42 0 chr17 38543178 38543274 -46895206 - L1MB8 LINE L1 -7 6171 6072 2120 166 87 80 chr17 38543358 38543656 -46894824 - MER92B LTR ERV1 -47 589 295 1861 89 0 4 chr17 38543656 38543893 -46894587 - AluSp SINE Alu -15 298 63 2120 166 87 80 chr17 38543893 38543920 -46894560 - MER92B LTR ERV1 -341 295 270 2303 101 7 0 chr17 38543920 38544216 -46894264 - AluSx SINE Alu -8 304 7 2120 166 87 80 chr17 38544216 38544474 -46894006 - MER92B LTR ERV1 -366 270 1 1614 146 42 0 chr17 38544474 38544762 -46893718 - L1MB7 LINE L1 -154 6030 5731 812 166 14 0 chr17 38544762 38544901 -46893579 - FRAM SINE Alu -15 161 21 2335 100 0 0 chr17 38544915 38545204 -46893276 - AluSg SINE Alu -21 289 1 195 386 75 4 chr17 38545245 38545499 -46892981 + L2 LINE L2 2400 2671 -643 253 393 58 13 chr17 38545533 38545757 -46892723 - L2 LINE L2 -635 2679 2446 2325 107 0 3 chr17 38545757 38546055 -46892425 + AluSx SINE Alu 1 297 -15 651 207 25 84 chr17 38546056 38546100 -46892380 + L1MC5 LINE L1 7022 7067 -911 1991 148 24 0 chr17 38546100 38546391 -46892089 + AluSq SINE Alu 1 298 -15 651 207 25 84 chr17 38546391 38546587 -46891893 + L1MC5 LINE L1 7067 7245 -733 829 123 0 0 chr17 38546660 38546774 -46891706 + AluJb SINE Alu 183 296 -16 701 246 28 5 chr17 38546774 38546985 -46891495 + L1MC5 LINE L1 7662 7877 -84 534 202 150 64 chr17 38546991 38547224 -46891256 - MER2 DNA MER2_type -3 342 90 705 43 0 0 chr17 38547224 38547317 -46891163 + (TATTG)n Simple_repeat Simple_repeat 2 94 0 2207 101 0 0 chr17 38547318 38547606 -46890874 - AluSx SINE Alu -24 288 1 253 323 42 10 chr17 38547617 38547713 -46890767 + MIR SINE MIR 149 247 -15 2199 104 7 7 chr17 38548399 38548688 -46889792 + AluSx SINE Alu 1 289 -23 2415 91 3 0 chr17 38548688 38548986 -46889494 + AluSx SINE Alu 1 299 -13 2312 119 3 0 chr17 38549143 38549455 -46889025 - AluSq SINE Alu 0 313 1 2238 98 17 3 chr17 38549502 38549799 -46888681 - AluSx SINE Alu -11 301 1 1667 214 88 35 chr17 38549825 38550371 -46888109 - L1MC4 LINE L1 -138 7904 7330 1150 207 13 9 chr17 38550375 38550559 -46887921 - AluSg/x SINE Alu -14 298 111 201 39 0 0 chr17 38550559 38550585 -46887895 + (GA)n Simple_repeat Simple_repeat 1 26 0 1150 207 13 9 chr17 38550585 38550632 -46887848 - AluSg/x SINE Alu -201 111 66 1843 138 18 4 chr17 38550632 38550907 -46887573 + AluSx SINE Alu 1 279 -33 38 22 0 0 chr17 38551038 38551083 -46887397 + AT_rich Low_complexity Low_complexity 1 45 0 562 105 0 0 chr17 38551084 38551160 -46887320 - AluJ/FLAM SINE Alu -235 77 2 2149 86 25 18 chr17 38551162 38551463 -46887017 - AluSx SINE Alu 0 303 1 1452 167 3 109 chr17 38551464 38551793 -46886687 - AluJo SINE Alu -6 296 3 372 167 17 0 chr17 38551818 38551878 -46886602 - U7 snRNA snRNA -2 61 1 2306 111 3 0 chr17 38551992 38552299 -46886181 - AluSx SINE Alu -1 311 4 746 117 23 8 chr17 38552301 38552429 -46886051 + L1MB8 LINE L1 6047 6176 -2 753 194 31 0 chr17 38552484 38552613 -46885867 - FLAM_C SINE Alu 0 133 1 255 216 103 10 chr17 38552649 38552746 -46885734 + L1MC4a LINE L1 6164 6269 -1539 1158 246 42 67 chr17 38552747 38553227 -46885253 + L1MC4a LINE L1 6397 6864 -944 479 278 37 51 chr17 38553231 38553447 -46885033 + L1ME LINE L1 472 684 -5846 863 223 0 0 chr17 38553472 38553629 -46884851 + FAM SINE Alu 1 157 -18 1886 122 107 0 chr17 38553629 38553899 -46884581 - AluSx SINE Alu -10 302 4 194 105 26 0 chr17 38553915 38553953 -46884527 + (CAA)n Simple_repeat Simple_repeat 2 40 0 364 240 107 16 chr17 38553955 38554076 -46884404 + L1ME LINE L1 719 850 -5680 1182 115 0 0 chr17 38554105 38554261 -46884219 + AluJb SINE Alu 157 312 0 906 136 0 0 chr17 38554365 38554490 -46883990 - FLAM_C SINE Alu -18 125 1 2829 169 21 4 chr17 38554490 38555018 -46883462 - L1MB8 LINE L1 -142 6036 5500 1466 140 0 35 chr17 38555046 38555122 -46883358 + AluSx SINE Alu 63 140 -164 2266 117 0 0 chr17 38555122 38555429 -46883051 + AluY SINE Alu 1 307 -4 1466 140 0 35 chr17 38555429 38555602 -46882878 + AluSx SINE Alu 140 304 0 388 90 75 0 chr17 38555604 38555671 -46882809 - L1MB8 LINE L1 -13 6165 6094 405 0 0 0 chr17 38555739 38555784 -46882696 + (TG)n Simple_repeat Simple_repeat 2 46 0 1370 119 0 0 chr17 38555791 38555968 -46882512 - AluSc SINE Alu -15 294 118 1100 231 51 27 chr17 38556020 38556174 -46882306 - AluJo SINE Alu 0 302 153 198 0 0 0 chr17 38556174 38556196 -46882284 + (TA)n Simple_repeat Simple_repeat 2 23 0 1100 231 51 27 chr17 38556196 38556336 -46882144 - AluJo SINE Alu -149 153 1 2283 95 10 3 chr17 38556348 38556642 -46881838 - AluSx SINE Alu -16 296 1 1475 156 53 34 chr17 38556642 38556962 -46881518 - L1MB4 LINE L1 -43 6137 5812 22 35 0 0 chr17 38556964 38556993 -46881487 + AT_rich Low_complexity Low_complexity 1 29 0 2098 127 3 25 chr17 38556997 38557312 -46881168 + AluSx SINE Alu 3 310 -2 642 89 0 0 chr17 38557315 38557405 -46881075 + (GA)n Simple_repeat Simple_repeat 1 90 0 2041 161 89 51 chr17 38557408 38557473 -46881007 + L1ME LINE L1 1523 1584 -4956 2437 75 3 10 chr17 38557473 38557781 -46880699 + AluY SINE Alu 1 306 -5 2041 161 89 51 chr17 38557781 38558159 -46880321 + L1ME LINE L1 1584 1946 -4594 2269 120 0 0 chr17 38558159 38558459 -46880021 + AluSx SINE Alu 1 300 -12 2041 161 89 51 chr17 38558459 38558539 -46879941 + L1ME LINE L1 1946 2021 -4519 2403 52 42 3 chr17 38558539 38558828 -46879652 + AluY SINE Alu 12 311 0 2041 161 89 51 chr17 38558828 38558872 -46879608 + L1ME LINE L1 2021 2114 -4426 1281 171 8 21 chr17 38558872 38559112 -46879368 - MLT1B LTR MaLR 0 390 154 1041 66 44 0 chr17 38559114 38559251 -46879229 + AluSp SINE Alu 1 143 -170 2072 112 0 24 chr17 38559288 38559575 -46878905 - AluSx SINE Alu -32 280 1 2341 114 0 6 chr17 38559586 38559901 -46878579 - AluSp SINE Alu 0 313 1 535 146 100 9 chr17 38559901 38560011 -46878469 - MLT1B LTR MaLR -270 120 1 7655 46 4 37 chr17 38560033 38561626 -46876854 + SVA Other Other 1 1385 -1 1785 148 27 133 chr17 38561643 38561834 -46876646 + L1ME LINE L1 2110 2320 -4220 2526 97 0 0 chr17 38561834 38562145 -46876335 + AluSx SINE Alu 1 311 -1 1785 148 27 133 chr17 38562145 38562243 -46876237 + L1ME LINE L1 2320 2427 -4113 2728 27 0 3 chr17 38562243 38562544 -46875936 + AluY SINE Alu 1 300 -11 1785 148 27 133 chr17 38562544 38562710 -46875770 + L1ME LINE L1 2427 2609 -3931 1565 172 45 35 chr17 38562710 38563000 -46875480 - AluJo SINE Alu -19 293 1 1785 148 27 133 chr17 38563000 38563068 -46875412 + L1ME LINE L1 2609 2683 -3857 2151 124 0 7 chr17 38563068 38563366 -46875114 + AluSx SINE Alu 1 296 -16 2279 84 7 17 chr17 38563368 38563654 -46874826 + AluSp SINE Alu 1 285 -28 198 0 0 0 chr17 38563654 38563676 -46874804 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1785 148 27 133 chr17 38563686 38563735 -46874745 + L1ME LINE L1 2684 2629 -3911 2334 107 7 0 chr17 38563735 38564043 -46874437 - AluSx SINE Alu 0 312 3 1425 233 3 7 chr17 38564077 38564373 -46874107 + AluJo SINE Alu 1 295 -17 1630 144 115 15 chr17 38564375 38564645 -46873835 + AluSg1 SINE Alu 1 297 -12 257 371 48 9 chr17 38564646 38564751 -46873729 - L2 LINE L2 -20 3293 3185 2162 107 3 25 chr17 38565494 38565813 -46872667 + AluSx SINE Alu 1 312 0 1613 180 26 62 chr17 38565831 38565983 -46872497 + MLT1C LTR MaLR 59 215 -252 2278 123 7 0 chr17 38565983 38566293 -46872187 + AluSx SINE Alu 1 312 0 1613 180 26 62 chr17 38566293 38566490 -46871990 + MLT1C LTR MaLR 215 417 -50 1777 142 0 48 chr17 38566490 38566800 -46871680 - AluJb SINE Alu -17 295 1 2083 144 3 0 chr17 38566802 38567107 -46871373 - AluSq SINE Alu -7 306 1 1613 180 26 62 chr17 38567107 38567175 -46871305 + MLT1C LTR MaLR 418 465 -2 2108 125 3 7 chr17 38567484 38567781 -46870699 - AluSq SINE Alu -17 296 1 684 170 7 35 chr17 38567935 38568076 -46870404 + MIR SINE MIR 114 250 -12 418 290 47 9 chr17 38568107 38568214 -46870266 + L2 LINE L2 3141 3251 -21 232 250 17 17 chr17 38569385 38569445 -46869035 + MIR SINE MIR 88 147 -61 1938 88 81 0 chr17 38569591 38569874 -46868606 + AluSg SINE Alu 1 306 -4 2332 73 19 35 chr17 38569874 38570188 -46868292 + AluSg SINE Alu 1 309 -1 30 27 0 0 chr17 38570417 38570454 -46868026 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr17 38572960 38572981 -46865499 + AT_rich Low_complexity Low_complexity 1 21 0 1978 103 21 14 chr17 38573097 38573398 -46865082 + AluSg SINE Alu 3 310 0 1896 146 7 32 chr17 38573528 38573837 -46864643 + AluJo SINE Alu 1 301 -11 2354 105 3 6 chr17 38574010 38574323 -46864157 - AluSx SINE Alu 0 312 1 31 44 0 0 chr17 38574352 38574397 -46864083 + AT_rich Low_complexity Low_complexity 1 45 0 832 136 0 8 chr17 38574397 38574515 -46863965 - FLAM_C SINE Alu -15 118 2 1567 216 83 48 chr17 38574515 38574602 -46863878 - L1ME2 LINE L1 -32 6132 6050 2033 93 100 4 chr17 38574602 38574881 -46863599 - AluSx SINE Alu -4 308 3 1567 216 83 48 chr17 38574881 38575256 -46863224 - L1ME2 LINE L1 -114 6050 5646 2579 148 30 19 chr17 38575256 38575683 -46862797 - Tigger2a DNA MER2_type 0 434 3 1567 216 83 48 chr17 38575683 38575764 -46862716 - L1ME2 LINE L1 -518 5646 5569 207 282 0 28 chr17 38575957 38575971 -46862509 + (TATG)n Simple_repeat Simple_repeat 4 17 -55 2368 94 0 7 chr17 38575971 38576279 -46862201 - AluSg SINE Alu -4 306 1 207 282 0 28 chr17 38576279 38576335 -46862145 + (TATG)n Simple_repeat Simple_repeat 17 72 0 258 300 0 0 chr17 38576400 38576460 -46862020 + L2 LINE L2 3205 3264 -8 2146 133 0 3 chr17 38576568 38576870 -46861610 - AluSx SINE Alu -11 301 1 2206 105 3 10 chr17 38576872 38577167 -46861313 - AluSx SINE Alu -19 293 1 2328 92 3 7 chr17 38577267 38577559 -46860921 + AluSx SINE Alu 5 295 -17 2537 58 0 0 chr17 38578447 38578740 -46859740 + AluY SINE Alu 1 293 -18 587 289 112 35 chr17 38578747 38578979 -46859501 - MIR SINE MIR -6 256 7 25 51 0 0 chr17 38579432 38579471 -46859009 + AT_rich Low_complexity Low_complexity 1 39 0 3386 83 10 8 chr17 38579829 38580312 -46858168 - L1MA4A LINE L1 -12 6291 5808 234 0 0 0 chr17 38580424 38580450 -46858030 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1608 190 0 8 chr17 38580460 38580728 -46857752 - AluSx SINE Alu -46 266 1 2282 103 0 16 chr17 38580904 38581215 -46857265 - AluSx SINE Alu -6 306 1 1776 108 4 0 chr17 38581226 38581477 -46857003 - AluSq SINE Alu -17 296 45 2126 109 0 0 chr17 38582420 38582714 -46855766 + AluSx SINE Alu 1 294 -18 2444 53 0 7 chr17 38582718 38583019 -46855461 + AluY SINE Alu 1 299 -12 1841 148 7 0 chr17 38583031 38583321 -46855159 + AluJb SINE Alu 1 292 -20 2074 133 0 0 chr17 38583631 38583932 -46854548 - AluSx SINE Alu -9 303 3 33 25 0 0 chr17 38583976 38584016 -46854464 + AT_rich Low_complexity Low_complexity 1 40 0 2292 72 0 0 chr17 38584023 38584314 -46854166 + AluSg SINE Alu 1 291 -19 668 236 81 0 chr17 38584406 38584554 -46853926 + MER5A DNA MER1_type 30 189 0 2147 99 3 3 chr17 38585586 38585880 -46852600 - AluSg SINE Alu -16 294 1 1458 86 101 0 chr17 38587003 38587212 -46851268 - MER30 DNA MER1_type 0 230 1 261 0 0 0 chr17 38588165 38588194 -46850286 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3611 35 0 9 chr17 38589519 38589949 -46848531 + L1PA5 LINE L1 5725 6150 -4 25 0 0 0 chr17 38589949 38589974 -46848506 + AT_rich Low_complexity Low_complexity 1 25 0 1980 123 0 17 chr17 38590490 38590790 -46847690 - AluSx SINE Alu -17 295 1 1776 138 3 14 chr17 38592494 38592791 -46845689 - AluJb SINE Alu -7 305 12 1842 137 23 20 chr17 38592795 38593101 -46845379 - AluSx SINE Alu -5 307 1 814 183 0 0 chr17 38593142 38593284 -46845196 + FLAM_C SINE Alu 2 143 0 1940 138 3 0 chr17 38593431 38593720 -46844760 - AluSx SINE Alu -22 290 1 1994 157 0 0 chr17 38593720 38594026 -46844454 - AluJb SINE Alu -6 306 1 2222 106 3 0 chr17 38594194 38594496 -46843984 + AluSx SINE Alu 1 303 -9 2077 116 0 17 chr17 38594994 38595158 -46843322 - AluSx SINE Alu -15 297 139 2091 130 0 0 chr17 38595158 38595465 -46843015 - AluSx SINE Alu -5 307 1 2077 116 0 17 chr17 38595465 38595602 -46842878 - AluSx SINE Alu -173 139 1 2164 50 18 7 chr17 38595616 38595942 -46842538 - AluY SINE Alu 0 329 1 2247 105 0 3 chr17 38596423 38596736 -46841744 - AluSx SINE Alu 0 312 1 1531 140 18 36 chr17 38597108 38597429 -46841051 - AluJo SINE Alu 0 312 16 186 43 0 0 chr17 38597522 38597545 -46840935 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2272 86 0 0 chr17 38597718 38598010 -46840470 + AluSg SINE Alu 1 292 -18 2288 77 0 10 chr17 38599033 38599346 -46839134 + AluY SINE Alu 1 310 -1 216 143 20 20 chr17 38599435 38599484 -46838996 + (CATAG)n Simple_repeat Simple_repeat 1 49 0 231 296 0 0 chr17 38599485 38599539 -46838941 - MIR SINE MIR -62 146 93 190 247 144 62 chr17 38599632 38599729 -46838751 - L2 LINE L2 -26 3246 3142 1427 174 62 10 chr17 38600053 38600322 -46838158 - AluJo SINE Alu -7 305 19 2067 108 10 7 chr17 38600322 38600618 -46837862 + AluSx SINE Alu 1 297 -15 1427 174 62 10 chr17 38600618 38600636 -46837844 - AluJo SINE Alu -293 19 3 2160 97 0 25 chr17 38600649 38600969 -46837511 - AluSq SINE Alu -1 312 1 202 284 231 50 chr17 38600976 38601539 -46836941 - L2 LINE L2 -608 2706 2042 461 215 19 0 chr17 38601929 38602036 -46836444 - L1MA10 LINE L1 -11 6323 6215 1279 175 6 117 chr17 38602288 38602613 -46835867 - AluJo SINE Alu -12 290 2 267 140 20 0 chr17 38602613 38602663 -46835817 - AluJo SINE Alu -166 136 86 807 146 7 22 chr17 38602664 38602801 -46835679 - AluJo SINE Alu -176 136 2 2240 67 0 55 chr17 38602887 38603070 -46835410 - AluY SINE Alu 0 311 152 2088 105 3 10 chr17 38603070 38603375 -46835105 - AluSq SINE Alu -10 303 1 2240 67 0 55 chr17 38603375 38603520 -46834960 - AluY SINE Alu -159 152 1 708 139 0 9 chr17 38603520 38603628 -46834852 + FLAM_C SINE Alu 27 133 -10 1955 105 0 0 chr17 38603679 38603945 -46834535 + AluSq SINE Alu 1 266 -47 2264 89 0 3 chr17 38604017 38604319 -46834161 + AluSp SINE Alu 1 301 -12 1996 133 0 7 chr17 38604326 38604619 -46833861 + AluSx SINE Alu 1 291 -21 1336 196 10 87 chr17 38605107 38605419 -46833061 + AluJo SINE Alu 2 289 -13 1806 112 35 14 chr17 38605556 38605841 -46832639 + AluSx SINE Alu 3 293 -19 875 141 8 0 chr17 38606225 38606353 -46832127 + FLAM_A SINE Alu 1 129 -4 465 148 0 12 chr17 38606357 38606438 -46832042 - MADE1 DNA Mariner 0 80 1 1781 85 125 0 chr17 38607420 38607692 -46830788 + AluSx SINE Alu 5 310 -2 1813 122 14 10 chr17 38608180 38608468 -46830012 + AluSx SINE Alu 1 289 -23 536 142 53 89 chr17 38608475 38608644 -46829836 + L1MC5 LINE L1 7384 7546 -415 1854 136 10 7 chr17 38608645 38608947 -46829533 + AluSx SINE Alu 1 303 -9 304 127 9 136 chr17 38608968 38609016 -46829464 + L1MC5 LINE L1 7611 7639 -322 2223 92 0 10 chr17 38609016 38609320 -46829160 + AluSg1 SINE Alu 1 301 -8 304 127 9 136 chr17 38609320 38609381 -46829099 + L1MC5 LINE L1 7639 7706 -255 795 60 0 35 chr17 38609382 38609498 -46828982 + AluSc SINE Alu 2 113 -196 606 125 0 0 chr17 38609496 38609584 -46828896 + Alu SINE Alu 218 305 -6 * 1539 121 59 22 chr17 38609592 38609890 -46828590 + AluSq SINE Alu 1 308 0 346 200 0 0 chr17 38609890 38609955 -46828525 + L1MC5 LINE L1 7702 7766 -195 26 30 0 0 chr17 38610138 38610171 -46828309 + AT_rich Low_complexity Low_complexity 1 33 0 2247 54 7 0 chr17 38610174 38610473 -46828007 + AluY SINE Alu 1 301 0 2198 111 0 0 chr17 38610817 38611124 -46827356 + AluSx SINE Alu 1 307 -5 2108 108 3 3 chr17 38611135 38611431 -46827049 + AluSx SINE Alu 1 296 -16 814 141 0 35 chr17 38611587 38611729 -46826751 + FLAM_C SINE Alu 3 139 -4 1756 173 3 6 chr17 38611832 38612144 -46826336 + AluJb SINE Alu 1 311 -1 2194 116 0 3 chr17 38613046 38613356 -46825124 - AluSg SINE Alu -1 309 1 2013 121 3 25 chr17 38613388 38613703 -46824777 + AluSx SINE Alu 1 308 -4 191 306 0 0 chr17 38616260 38616309 -46822171 + MER5B DNA MER1_type 3 51 -127 1989 115 3 26 chr17 38616696 38616862 -46821618 - AluSg SINE Alu -12 298 141 2055 112 0 13 chr17 38616862 38617167 -46821313 - AluSx SINE Alu -9 303 3 1989 115 3 26 chr17 38617167 38617305 -46821175 - AluSg SINE Alu -169 141 1 603 245 95 66 chr17 38617310 38617455 -46821025 - L1MC/D LINE L1 -1985 5823 5684 2022 130 0 3 chr17 38617455 38617756 -46820724 - AluSx SINE Alu -12 300 1 603 245 95 66 chr17 38617756 38617883 -46820597 - L1MC/D LINE L1 -2124 5684 5543 390 305 0 46 chr17 38617893 38618044 -46820436 - MER5A DNA MER1_type -45 144 1 306 312 109 55 chr17 38621903 38622323 -46816157 - L2 LINE L2 0 3272 2830 1656 110 4 27 chr17 38622933 38623196 -46815284 + AluSx SINE Alu 1 257 -55 392 264 125 64 chr17 38623214 38623370 -46815110 - L2 LINE L2 -1217 2097 1952 2091 84 24 7 chr17 38623370 38623657 -46814823 + AluSx SINE Alu 1 292 -20 392 264 125 64 chr17 38623657 38623795 -46814685 - L2 LINE L2 -1362 1952 1785 459 140 29 118 chr17 38626841 38626873 -46811607 + MER53 DNA DNA 3 36 -153 2280 88 0 13 chr17 38626873 38627179 -46811301 + AluSx SINE Alu 1 302 -10 459 140 29 118 chr17 38627179 38627195 -46811285 + MER53 DNA DNA 36 52 -137 2230 84 0 7 chr17 38627195 38627492 -46810988 + AluSp SINE Alu 1 295 -18 459 140 29 118 chr17 38627492 38627578 -46810902 + MER53 DNA DNA 52 126 -63 2108 96 0 10 chr17 38628694 38629010 -46809470 + AluSx SINE Alu 3 312 0 3361 180 46 40 chr17 38635151 38635553 -46802927 + L1MB8 LINE L1 4781 5179 -999 2255 71 3 10 chr17 38635553 38635850 -46802630 + AluSx SINE Alu 2 296 -16 3361 180 46 40 chr17 38635850 38636172 -46802308 + L1MB8 LINE L1 5179 5498 -680 2420 53 0 7 chr17 38636172 38636471 -46802009 + AluY SINE Alu 1 297 -14 3361 180 46 40 chr17 38636471 38636586 -46801894 + L1MB8 LINE L1 5498 5611 -567 2151 111 0 0 chr17 38636586 38636875 -46801605 + AluSg SINE Alu 1 289 -21 3361 180 46 40 chr17 38636875 38637389 -46801091 + L1MB8 LINE L1 5611 6135 -43 1154 133 0 0 chr17 38637389 38637547 -46800933 - AluSg/x SINE Alu -21 291 134 2184 95 10 0 chr17 38637547 38637841 -46800639 - AluSq SINE Alu -16 297 1 2079 107 3 7 chr17 38638116 38638447 -46800033 - AluSq SINE Alu 0 313 1 2505 61 0 0 chr17 38638475 38638785 -46799695 - AluY SINE Alu -1 310 1 1281 168 84 35 chr17 38639408 38639693 -46798787 + AluSx SINE Alu 1 299 -3 243 0 0 0 chr17 38639725 38639752 -46798728 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1406 172 0 0 chr17 38639857 38640089 -46798391 - AluJb SINE Alu -41 271 40 1544 169 30 34 chr17 38640118 38640155 -46798325 - AluJb SINE Alu -16 296 260 3722 116 4 4 chr17 38640155 38640666 -46797814 - MER9 LTR ERVK 0 511 1 1544 169 30 34 chr17 38640666 38640924 -46797556 - AluJb SINE Alu -52 260 2 426 228 31 24 chr17 38641034 38641161 -46797319 + MIR3 SINE MIR 15 142 -66 234 150 0 0 chr17 38641161 38641201 -46797279 - MER41A LTR ERV1 0 554 515 2458 54 0 3 chr17 38641272 38641570 -46796910 + AluY SINE Alu 2 298 -13 862 154 26 0 chr17 38641583 38641662 -46796818 + MER84 LTR ERVI 7 83 -424 1662 146 54 17 chr17 38641662 38641957 -46796523 + AluSx SINE Alu 1 306 -6 862 154 26 0 chr17 38641957 38642033 -46796447 + MER84 LTR ERVI 83 166 -341 21 0 0 0 chr17 38642035 38642056 -46796424 + AT_rich Low_complexity Low_complexity 1 21 0 1081 217 0 0 chr17 38642056 38642268 -46796212 - MLT1A1 LTR MaLR -57 308 97 892 132 31 0 chr17 38642310 38642469 -46796011 + MER84 LTR ERVI 285 448 -59 456 108 14 0 chr17 38642539 38642613 -46795867 + Alu SINE Alu 231 305 -6 1210 194 4 13 chr17 38642727 38642959 -46795521 - AluJb SINE Alu -40 272 43 1628 174 31 14 chr17 38642992 38643279 -46795201 - AluJo SINE Alu -19 293 2 397 252 31 24 chr17 38643389 38643516 -46794964 + MIR3 SINE MIR 15 142 -66 249 150 0 0 chr17 38643516 38643556 -46794924 - MER41B LTR ERV1 0 635 596 381 132 44 0 chr17 38643625 38643693 -46794787 + MER84 LTR ERVI 7 77 -430 422 153 0 0 chr17 38643693 38643752 -46794728 + AluSx SINE Alu 25 83 -230 206 244 12 47 chr17 38643755 38643841 -46794639 + (CGG)n Simple_repeat Simple_repeat 3 85 0 * 218 204 0 0 chr17 38643798 38643842 -46794638 + (CAG)n Simple_repeat Simple_repeat 1 44 0 28 29 0 0 chr17 38643859 38643894 -46794586 + GC_rich Low_complexity Low_complexity 1 35 0 291 122 0 0 chr17 38643909 38643958 -46794522 + (CCG)n Simple_repeat Simple_repeat 2 50 0 2311 54 0 0 chr17 38644209 38644516 -46793964 - AluY SINE Alu 0 311 5 2511 62 0 0 chr17 38644523 38644831 -46793649 - AluY SINE Alu -3 308 1 968 142 58 0 chr17 38645934 38646089 -46792391 + AluSx SINE Alu 71 234 -76 254 228 0 0 chr17 38646093 38646150 -46792330 + MER84 LTR ERVI 74 130 -377 186 71 0 0 chr17 38646153 38646181 -46792299 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1849 112 0 51 chr17 38646183 38646331 -46792149 - AluSx SINE Alu -33 279 152 2350 70 3 0 chr17 38646331 38646632 -46791848 - AluY SINE Alu -8 303 2 1849 112 0 51 chr17 38646632 38646777 -46791703 - AluSx SINE Alu -160 152 1 2583 125 26 2 chr17 38646780 38647237 -46791243 - MER41B LTR ERV1 -167 468 1 472 332 89 38 chr17 38647324 38647716 -46790764 + L2 LINE L2 2861 3272 0 25 105 0 0 chr17 38648028 38648123 -46790357 + GC_rich Low_complexity Low_complexity 1 95 0 30 77 0 0 chr17 38648184 38648249 -46790231 + GC_rich Low_complexity Low_complexity 1 65 0 396 306 32 16 chr17 38648470 38648594 -46789886 + MIR SINE MIR 60 185 -77 1008 73 7 0 chr17 38649407 38649543 -46788937 + AluY SINE Alu 1 137 -174 276 64 0 0 chr17 38649545 38649592 -46788888 + Alu SINE Alu 261 307 -1 357 299 145 45 chr17 38649780 38650001 -46788479 + L2 LINE L2 3030 3272 0 2273 92 3 0 chr17 38650551 38650846 -46787634 + AluSx SINE Alu 1 296 -16 563 207 27 0 chr17 38650847 38650958 -46787522 + MIR SINE MIR 31 144 -118 207 191 0 0 chr17 38651134 38651176 -46787304 + L2 LINE L2 3006 3047 -225 2088 124 0 0 chr17 38651555 38651854 -46786626 + AluSx SINE Alu 13 311 -1 1895 82 19 4 chr17 38651856 38652123 -46786357 + L1PA8 LINE L1 5902 6172 0 2392 81 0 0 chr17 38652126 38652434 -46786046 + AluY SINE Alu 1 308 -3 190 276 57 9 chr17 38652489 38652594 -46785886 - L2 LINE L2 -274 2998 2889 323 326 118 0 chr17 38653083 38653227 -46785253 + MIR SINE MIR 10 170 -92 198 0 0 0 chr17 38653537 38653559 -46784921 + (CAG)n Simple_repeat Simple_repeat 1 22 0 303 303 41 25 chr17 38653568 38653617 -46784863 + MER5A DNA MER1_type 62 109 -80 2025 112 10 7 chr17 38653617 38653778 -46784702 - AluSq SINE Alu -16 297 133 2164 114 0 3 chr17 38653778 38654075 -46784405 - AluSx SINE Alu -16 296 1 2025 112 10 7 chr17 38654075 38654209 -46784271 - AluSq SINE Alu -180 133 1 1882 163 0 0 chr17 38654213 38654501 -46783979 - AluSx SINE Alu -20 292 5 303 303 41 25 chr17 38654501 38654568 -46783912 + MER5A DNA MER1_type 111 185 -4 189 0 0 0 chr17 38656285 38656306 -46782174 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 961 166 0 12 chr17 38656306 38656453 -46782027 - AluSg/x SINE Alu -32 280 134 1981 149 0 0 chr17 38656453 38656748 -46781732 - AluSx SINE Alu -17 295 1 961 166 0 12 chr17 38656748 38656763 -46781717 - AluSg/x SINE Alu -178 134 120 1714 197 8 36 chr17 38656804 38657195 -46781285 - MER21A LTR ERV1 0 931 552 297 140 18 0 chr17 38657201 38657258 -46781222 - Alu SINE Alu -2 300 243 1374 189 29 32 chr17 38657258 38657539 -46780941 - AluJb SINE Alu -32 280 1 2249 148 57 82 chr17 38657541 38658103 -46780377 - MER21A LTR ERV1 -374 557 10 262 248 9 0 chr17 38659598 38659684 -46778796 - MIR SINE MIR -75 133 45 229 268 0 0 chr17 38659804 38659860 -46778620 + (CTGGGG)n Simple_repeat Simple_repeat 2 57 0 231 188 0 0 chr17 38660328 38660376 -46778104 + (CTGGGG)n Simple_repeat Simple_repeat 3 50 0 838 137 0 15 chr17 38660556 38660687 -46777793 + AluJo SINE Alu 1 129 -173 527 153 12 0 chr17 38660703 38660788 -46777692 + AluJo SINE Alu 195 280 -32 271 195 61 152 chr17 38660971 38661040 -46777440 + MIR SINE MIR 71 145 -117 1893 122 87 0 chr17 38661040 38661328 -46777152 - AluSp SINE Alu 0 313 1 271 195 61 152 chr17 38661328 38661422 -46777058 + MIR SINE MIR 145 219 -43 1158 294 85 26 chr17 38662383 38662887 -46775593 + L2 LINE L2 2167 2700 -614 1989 131 0 0 chr17 38662892 38663183 -46775297 + AluSp SINE Alu 5 295 -18 1786 149 31 3 chr17 38663200 38663489 -46774991 + AluSq SINE Alu 1 297 -16 558 132 0 94 chr17 38663489 38663595 -46774885 + AluJo SINE Alu 88 183 -129 805 173 0 0 chr17 38663595 38663728 -46774752 - AluJo/FLAM SINE Alu -179 133 1 2292 147 64 57 chr17 38663730 38664274 -46774206 - MER21A LTR ERV1 -374 557 10 360 305 130 6 chr17 38665722 38665899 -46772581 - MIR SINE MIR -29 233 35 269 135 19 0 chr17 38666020 38666072 -46772408 + (CTGGGG)n Simple_repeat Simple_repeat 6 58 0 213 178 0 0 chr17 38666537 38666582 -46771898 + (CTGGGG)n Simple_repeat Simple_repeat 6 50 0 594 136 5 6 chr17 38666783 38667026 -46771454 + AluJo SINE Alu 1 280 -32 306 223 68 95 chr17 38667211 38667264 -46771216 + MIR SINE MIR 76 129 -133 1988 103 72 0 chr17 38667264 38667555 -46770925 - AluSp SINE Alu -1 312 1 306 223 68 95 chr17 38667555 38667649 -46770831 + MIR SINE MIR 129 219 -43 1114 275 96 37 chr17 38668605 38669114 -46769366 + L2 LINE L2 2167 2705 -609 1884 137 17 3 chr17 38669120 38669412 -46769068 + AluSq SINE Alu 1 296 -17 2203 112 0 3 chr17 38669414 38669726 -46768754 + AluSq SINE Alu 1 311 -2 1186 193 0 5 chr17 38669743 38669956 -46768524 + AluJo SINE Alu 87 298 -14 2023 102 7 0 chr17 38669956 38670230 -46768250 + AluSx SINE Alu 1 276 -36 2210 109 7 0 chr17 38670230 38670532 -46767948 + AluSx SINE Alu 1 304 -8 355 203 0 0 chr17 38670686 38670755 -46767725 - MSTD LTR MaLR -246 150 82 1254 132 0 49 chr17 38670758 38670963 -46767517 - AluSx SINE Alu -117 195 1 318 176 37 111 chr17 38670963 38670993 -46767487 - MSTD LTR MaLR -328 100 69 1632 168 7 36 chr17 38670993 38671296 -46767184 + AluJo SINE Alu 2 295 -17 318 176 37 111 chr17 38671296 38671373 -46767107 - MSTD LTR MaLR -359 69 1 401 262 216 73 chr17 38671373 38671678 -46766802 + L2 LINE L2 2776 3155 -158 2275 91 10 3 chr17 38671678 38671986 -46766494 - AluSx SINE Alu -2 310 1 401 262 216 73 chr17 38671986 38672097 -46766383 + L2 LINE L2 3155 3249 -64 190 286 0 0 chr17 38672333 38672382 -46766098 + L2 LINE L2 3044 3092 -221 350 214 82 0 chr17 38672386 38672484 -46765996 - MER69 DNA AcHobo -11 2515 2410 2462 37 0 49 chr17 38672684 38673011 -46765469 - AluY SINE Alu 0 311 1 2081 81 7 0 chr17 38673012 38673284 -46765196 - AluSp SINE Alu -35 278 5 196 324 15 15 chr17 38673389 38673457 -46765023 + MIR SINE MIR 117 184 -78 194 373 36 9 chr17 38673522 38673632 -46764848 + MIR SINE MIR 33 145 -63 244 284 0 27 chr17 38675206 38675280 -46763200 + MER5A DNA MER1_type 87 158 -31 233 363 39 73 chr17 38678082 38678261 -46760219 + MIR SINE MIR 13 185 -77 246 364 0 0 chr17 38678277 38678365 -46760115 - L2 LINE L2 -40 3232 3145 2494 42 0 7 chr17 38679777 38680086 -46758394 + AluY SINE Alu 1 307 -4 255 186 169 0 chr17 38681438 38681497 -46756983 + L2 LINE L2 3201 3269 -3 22 0 0 0 chr17 38682234 38682256 -46756224 + AT_rich Low_complexity Low_complexity 1 22 0 2415 67 3 22 chr17 38682338 38682652 -46755828 - AluY SINE Alu -3 308 1 2188 101 38 0 chr17 38682836 38683124 -46755356 - AluSx SINE Alu -13 299 1 42 0 0 0 chr17 38684351 38684393 -46754087 + AT_rich Low_complexity Low_complexity 1 42 0 400 181 6 31 chr17 38686316 38686477 -46752003 + CT-rich Low_complexity Low_complexity 1 156 0 1974 124 0 0 chr17 38686478 38686745 -46751735 - AluSx SINE Alu -39 273 7 983 171 29 96 chr17 38686949 38687188 -46751292 + MER58A DNA MER1_type 1 223 -1 1498 98 10 5 chr17 38687501 38687706 -46750774 + AluSg/x SINE Alu 105 310 -2 409 137 11 11 chr17 38687706 38687801 -46750679 + (TA)n Simple_repeat Simple_repeat 2 96 0 243 0 0 0 chr17 38687801 38687828 -46750652 + (CA)n Simple_repeat Simple_repeat 2 28 0 2327 94 0 3 chr17 38687843 38688141 -46750339 + AluSc SINE Alu 5 301 -8 2057 147 3 10 chr17 38688152 38688452 -46750028 + AluSx SINE Alu 1 298 -14 1159 243 45 14 chr17 38688916 38689238 -46749242 - AluJb SINE Alu 0 332 2 231 188 0 0 chr17 38689428 38689476 -46749004 + (CTGGGG)n Simple_repeat Simple_repeat 3 50 0 830 137 0 15 chr17 38689656 38689787 -46748693 + AluJo SINE Alu 1 129 -173 538 123 12 0 chr17 38689807 38689888 -46748592 + AluJo SINE Alu 199 280 -32 319 180 66 150 chr17 38690068 38690140 -46748340 + MIR SINE MIR 67 119 -143 2008 115 87 0 chr17 38690140 38690428 -46748052 - AluSp SINE Alu 0 313 1 319 180 66 150 chr17 38690428 38690522 -46747958 + MIR SINE MIR 119 219 -43 1168 277 96 37 chr17 38691482 38691991 -46746489 + L2 LINE L2 2167 2705 -609 1973 137 17 3 chr17 38691997 38692289 -46746191 + AluSq SINE Alu 1 296 -17 2293 112 0 3 chr17 38692291 38692603 -46745877 + AluSq SINE Alu 1 311 -2 1223 190 0 5 chr17 38692620 38692831 -46745649 + AluJo SINE Alu 87 296 -16 2148 98 7 0 chr17 38692833 38693107 -46745373 + AluSx SINE Alu 1 276 -36 2300 109 7 0 chr17 38693107 38693409 -46745071 + AluSx SINE Alu 1 304 -8 2096 79 13 73 chr17 38693701 38694042 -46744438 + AluY SINE Alu 8 311 0 248 271 186 0 chr17 38694043 38694172 -46744308 - L2 LINE L2 -202 3070 2918 295 342 145 5 chr17 38694280 38694473 -46744007 - L2 LINE L2 -557 2757 2538 833 156 14 0 chr17 38694484 38694625 -46743855 + FLAM_C SINE Alu 1 143 0 213 284 105 84 chr17 38694660 38694899 -46743581 - L2 LINE L2 -840 2474 2231 1692 133 27 30 chr17 38696193 38696493 -46741987 + AluJo SINE Alu 1 299 -13 2447 58 10 0 chr17 38696928 38697222 -46741258 + AluY SINE Alu 1 297 -14 2284 113 3 6 chr17 38698723 38699034 -46739446 + AluSx SINE Alu 2 311 -1 1852 104 15 22 chr17 38699072 38699341 -46739139 + AluSq SINE Alu 26 292 -21 2361 111 0 0 chr17 38701776 38702074 -46736406 - AluSq SINE Alu -15 298 1 1943 133 13 32 chr17 38702500 38702808 -46735672 + AluJb SINE Alu 7 308 -4 1314 181 76 14 chr17 38706226 38706502 -46731978 - AluY SINE Alu -18 293 1 724 90 189 0 chr17 38706502 38706613 -46731867 - AluSg SINE Alu -177 133 2 2134 134 3 3 chr17 38706626 38706924 -46731556 - AluSx SINE Alu -14 298 1 773 200 0 15 chr17 38706953 38707088 -46731392 + FLAM_A SINE Alu 1 133 0 1895 163 3 3 chr17 38707406 38707700 -46730780 - AluJb SINE Alu -18 294 1 2171 119 0 10 chr17 38707885 38708178 -46730302 + AluSx SINE Alu 1 290 -22 955 188 0 24 chr17 38708188 38708353 -46730127 + FRAM SINE Alu 1 158 -18 1943 167 0 0 chr17 38708356 38708649 -46729831 + AluJb SINE Alu 1 293 -19 2226 99 0 10 chr17 38708652 38708967 -46729513 + AluSx SINE Alu 2 312 0 2202 98 7 16 chr17 38709305 38709610 -46728870 - AluSq SINE Alu -11 302 1 261 287 18 161 chr17 38710203 38710409 -46728071 + MIR SINE MIR 26 203 -5 261 299 68 43 chr17 38710500 38710617 -46727863 - MIR3 SINE MIR -25 183 64 1586 142 24 109 chr17 38710636 38710974 -46727506 + AluYb8 SINE Alu 1 309 -9 1387 205 42 7 chr17 38710985 38711292 -46727188 + L1M4 LINE L1 3567 3884 -2262 333 199 76 61 chr17 38711297 38711334 -46727146 + L1MC5 LINE L1 7561 7596 -365 2527 63 7 3 chr17 38711334 38711637 -46726843 + AluY SINE Alu 1 304 -7 333 199 76 61 chr17 38711637 38711730 -46726750 + L1MC5 LINE L1 7596 7693 -268 1593 174 14 14 chr17 38711875 38712168 -46726312 + AluJb SINE Alu 1 293 -19 2108 128 7 0 chr17 38712240 38712528 -46725952 + AluSx SINE Alu 1 290 -22 2265 71 3 30 chr17 38712528 38712825 -46725655 + AluY SINE Alu 1 289 -22 1201 83 7 0 chr17 38712987 38713131 -46725349 + AluSg/x SINE Alu 68 212 -98 184 239 162 148 chr17 38713234 38713339 -46725141 - MER5A DNA MER1_type 0 189 87 1622 154 26 51 chr17 38713339 38713650 -46724830 - AluJb SINE Alu -9 303 1 1874 149 7 7 chr17 38713654 38713949 -46724531 - AluJo SINE Alu -17 295 1 184 239 162 148 chr17 38713949 38713980 -46724500 - MER5A DNA MER1_type -104 85 46 1025 168 22 0 chr17 38714017 38714202 -46724278 - MER5A DNA MER1_type 0 189 1 577 216 54 27 chr17 38714288 38714473 -46724007 - MLT1J LTR MaLR -33 478 289 1971 138 24 10 chr17 38714508 38714805 -46723675 + AluJb SINE Alu 1 301 -11 437 163 11 0 chr17 38714805 38714897 -46723583 + GA-rich Low_complexity Low_complexity 2 94 0 241 217 121 24 chr17 38714945 38715028 -46723452 - MLT1L LTR MaLR -343 272 182 689 224 0 0 chr17 38715110 38715226 -46723254 + FLAM_A SINE Alu 1 116 -17 804 211 167 0 chr17 38715229 38715409 -46723071 - AluJo SINE Alu -17 295 86 218 240 20 0 chr17 38715504 38715554 -46722926 + MIR SINE MIR 93 143 -65 445 285 48 24 chr17 38715562 38715727 -46722753 - MER20B DNA MER1_type -18 201 32 1138 174 77 5 chr17 38715778 38715973 -46722507 - AluJo SINE Alu -18 294 86 2008 147 30 0 chr17 38715998 38716297 -46722183 - AluSx SINE Alu -4 308 1 193 321 0 0 chr17 38716308 38716364 -46722116 + L2 LINE L2 574 629 -2685 303 91 0 0 chr17 38716430 38716474 -46722006 + MADE1 DNA Mariner 1 44 -36 1956 137 33 3 chr17 38716474 38716773 -46721707 - AluSg SINE Alu -2 308 1 791 181 0 0 chr17 38716775 38716913 -46721567 - AluSg/x SINE Alu -1 309 172 831 221 72 50 chr17 38717045 38717307 -46721173 + AluJo SINE Alu 44 311 -1 2301 101 0 0 chr17 38717425 38717721 -46720759 - AluSx SINE Alu -16 296 1 299 221 31 117 chr17 38718262 38718425 -46720055 + L1 LINE L1 4181 4329 -1817 2296 92 3 0 chr17 38718425 38718717 -46719763 - AluY SINE Alu -18 293 1 31 82 0 0 chr17 38718726 38718799 -46719681 + AT_rich Low_complexity Low_complexity 1 73 0 983 202 22 36 chr17 38718801 38718975 -46719505 - AluJb SINE Alu -10 302 130 324 0 0 0 chr17 38718975 38719011 -46719469 + (TG)n Simple_repeat Simple_repeat 2 37 0 983 202 22 36 chr17 38719011 38719059 -46719421 - AluJb SINE Alu -182 130 83 1268 134 0 0 chr17 38719069 38719254 -46719226 - AluJb SINE Alu 0 304 120 648 173 18 0 chr17 38719297 38719407 -46719073 - AluJb SINE Alu -178 134 23 274 177 48 0 chr17 38719407 38719469 -46719011 - L1MB3 LINE L1 -42 6141 6077 21 0 0 0 chr17 38719489 38719510 -46718970 + AT_rich Low_complexity Low_complexity 1 21 0 1551 157 46 75 chr17 38719511 38719672 -46718808 - AluJo SINE Alu -11 301 152 2096 106 60 0 chr17 38719672 38719956 -46718524 - AluSx SINE Alu -11 301 1 1551 157 46 75 chr17 38719956 38720100 -46718380 - AluJo SINE Alu -160 152 5 604 195 9 0 chr17 38720160 38720273 -46718207 + FLAM_C SINE Alu 1 114 -19 189 132 0 0 chr17 38720407 38720445 -46718035 + (TAAAAA)n Simple_repeat Simple_repeat 3 40 0 806 98 8 23 chr17 38720445 38720577 -46717903 - MER2 DNA MER2_type -135 210 81 1963 136 17 0 chr17 38720578 38720873 -46717607 - AluSx SINE Alu 0 312 13 377 233 67 0 chr17 38720892 38720982 -46717498 - MER2 DNA MER2_type -249 96 1 2331 104 7 0 chr17 38722657 38722955 -46715525 + AluSx SINE Alu 1 300 -12 947 171 18 18 chr17 38722960 38723130 -46715350 + AluJb SINE Alu 130 299 -13 256 154 0 0 chr17 38723200 38723239 -46715241 - MER81 DNA DNA -75 39 1 307 304 73 13 chr17 38723511 38723665 -46714815 - MIR SINE MIR -64 144 8 1192 123 0 0 chr17 38723717 38723880 -46714600 - AluSg/x SINE Alu -10 302 140 912 244 94 74 chr17 38724190 38724415 -46714065 + MLT1L LTR MaLR 135 354 -261 2648 172 49 31 chr17 38724415 38724926 -46713554 - MLT2B1 LTR ERVL 0 520 1 912 244 94 74 chr17 38724926 38725014 -46713466 + MLT1L LTR MaLR 354 439 -176 1984 151 3 35 chr17 38725014 38725331 -46713149 + AluJb SINE Alu 1 307 -5 912 244 94 74 chr17 38725331 38725474 -46713006 + MLT1L LTR MaLR 439 601 -14 1348 96 0 17 chr17 38725593 38725771 -46712709 + AluSq SINE Alu 137 311 -2 2223 119 3 0 chr17 38725771 38726066 -46712414 + AluSx SINE Alu 1 296 -16 585 194 48 13 chr17 38726083 38726277 -46712203 + LTR54 LTR ERV1 167 397 -113 2178 93 11 0 chr17 38727331 38727637 -46710843 + AluSp SINE Alu 1 309 0 285 170 0 0 chr17 38727642 38727695 -46710785 + L1PA16 LINE L1 6114 6166 0 2457 86 0 16 chr17 38727729 38728042 -46710438 + AluY SINE Alu 1 308 -3 2481 66 3 0 chr17 38728165 38728468 -46710012 + AluY SINE Alu 1 304 -7 213 292 83 31 chr17 38728894 38728990 -46709490 + L2 LINE L2 3168 3268 -4 2218 130 3 0 chr17 38729521 38729820 -46708660 + AluSx SINE Alu 1 300 -12 2100 143 0 3 chr17 38729862 38730170 -46708310 + AluSx SINE Alu 4 310 -2 1825 185 3 0 chr17 38730249 38730546 -46707934 + AluJo SINE Alu 1 298 -14 386 263 151 18 chr17 38730571 38730856 -46707624 + L1MC5 LINE L1 7605 7927 -34 803 229 46 11 chr17 38730960 38731135 -46707345 + AluJo SINE Alu 113 293 -19 2229 120 0 3 chr17 38731141 38731441 -46707039 + AluSx SINE Alu 1 299 -13 1664 67 5 0 chr17 38731447 38731656 -46706824 + AluY SINE Alu 10 219 -92 1561 154 26 51 chr17 38731858 38732169 -46706311 - AluJb SINE Alu -9 303 1 1215 173 5 9 chr17 38732173 38732387 -46706093 - AluJb SINE Alu -17 295 83 2083 135 3 3 chr17 38732582 38732885 -46705595 + AluSx SINE Alu 1 303 -9 434 249 28 28 chr17 38732886 38733063 -46705417 - L1MB7 LINE L1 -13 6171 5995 537 363 71 8 chr17 38733077 38733207 -46705273 - L1ME LINE L1 -516 5605 5485 1775 152 10 24 chr17 38733207 38733503 -46704977 + AluJb SINE Alu 1 292 -20 537 363 71 8 chr17 38733503 38733612 -46704868 - L1ME LINE L1 -636 5485 5351 2565 40 0 0 chr17 38734243 38734547 -46703933 + AluY SINE Alu 1 304 -7 22 0 0 0 chr17 38734693 38734715 -46703765 + AT_rich Low_complexity Low_complexity 1 22 0 1606 181 0 44 chr17 38734940 38735261 -46703219 + AluJo SINE Alu 6 312 0 2236 106 7 0 chr17 38736258 38736561 -46701919 + AluSx SINE Alu 1 305 -7 1923 74 0 16 chr17 38736918 38737176 -46701304 + AluY SINE Alu 56 309 -2 1850 126 14 10 chr17 38737267 38737561 -46700919 + AluSq SINE Alu 7 301 -12 1972 160 0 3 chr17 38737768 38738074 -46700406 + AluJb SINE Alu 1 305 -7 2289 98 0 3 chr17 38738074 38738380 -46700100 + AluSp SINE Alu 1 305 -8 353 187 40 0 chr17 38741313 38741388 -46697092 - MIR SINE MIR -32 230 153 601 253 50 50 chr17 38741388 38741509 -46696971 + MER46C DNA MER2_type 1 121 -217 2293 93 0 6 chr17 38741509 38741821 -46696659 - AluSg SINE Alu 0 310 1 601 253 50 50 chr17 38741821 38741996 -46696484 + MER46C DNA MER2_type 120 297 -41 1117 103 0 0 chr17 38742096 38742251 -46696229 + AluSg/x SINE Alu 137 291 -21 256 313 0 0 chr17 38742252 38742319 -46696161 - MIR SINE MIR -194 68 2 1444 172 111 14 chr17 38743554 38743833 -46694647 + AluJb SINE Alu 1 306 -6 1057 117 0 49 chr17 38746263 38746426 -46692054 - AluJb SINE Alu -12 300 146 236 157 0 59 chr17 38746562 38746613 -46691867 - MIR SINE MIR -62 200 153 1507 96 5 5 chr17 38746614 38746823 -46691657 - AluY SINE Alu -17 294 86 1842 132 4 4 chr17 38746923 38747203 -46691277 + AluSx SINE Alu 26 305 -7 984 150 6 42 chr17 38747203 38747370 -46691110 + AluJb SINE Alu 134 294 -18 364 241 38 0 chr17 38747431 38747510 -46690970 - MIR SINE MIR 0 262 181 2038 89 46 40 chr17 38747684 38747857 -46690623 - AluSp SINE Alu -7 306 129 2420 43 7 3 chr17 38747857 38748156 -46690324 - AluY SINE Alu -11 300 1 2038 89 46 40 chr17 38748156 38748286 -46690194 - AluSp SINE Alu -184 129 1 2211 96 3 0 chr17 38748505 38748797 -46689683 - AluSq SINE Alu -20 293 1 2144 96 7 3 chr17 38748799 38749092 -46689388 - AluSx SINE Alu -18 294 1 761 164 0 8 chr17 38749094 38749228 -46689252 - FLAM_A SINE Alu 0 133 1 341 311 35 23 chr17 38749845 38750085 -46688395 + L1 LINE L1 4895 5137 -1009 672 106 0 106 chr17 38750087 38750164 -46688316 + AluJo/FLAM SINE Alu 1 60 -242 1225 149 128 43 chr17 38750164 38750445 -46688035 - AluJo SINE Alu -5 307 3 672 106 0 106 chr17 38750445 38750499 -46687981 + AluJo/FLAM SINE Alu 60 118 -184 831 126 197 0 chr17 38750518 38750701 -46687779 + MER21A LTR ERV1 1 219 -712 * 2653 161 57 35 chr17 38750700 38750876 -46687604 + MER21A LTR ERV1 373 544 -387 1905 134 7 7 chr17 38750876 38751175 -46687305 - AluSx SINE Alu -13 299 1 2653 161 57 35 chr17 38751175 38751545 -46686935 + MER21A LTR ERV1 544 931 0 4108 156 45 3 chr17 38751545 38752296 -46686184 + MER21A-int LTR ERV1 1 783 -3408 2220 103 0 0 chr17 38752296 38752588 -46685892 + AluSx SINE Alu 1 292 -20 591 156 11 0 chr17 38752588 38752678 -46685802 + AluJo/F(R)AM SINE Alu 134 224 -88 2028 104 45 0 chr17 38752692 38752981 -46685499 + AluSg SINE Alu 1 302 -8 2031 81 70 7 chr17 38752981 38753266 -46685214 + AluSp SINE Alu 1 303 -10 1988 123 3 17 chr17 38753283 38753584 -46684896 + AluSx SINE Alu 1 297 -15 1153 151 38 30 chr17 38753584 38753980 -46684500 - LTR54 LTR ERV1 -38 472 2 3091 133 94 24 chr17 38753981 38754558 -46683922 + L1MB3 LINE L1 5522 6146 -37 1876 122 7 43 chr17 38754558 38754862 -46683618 + AluJo SINE Alu 1 293 -19 3091 133 94 24 chr17 38754862 38754902 -46683578 + L1MB3 LINE L1 6146 6182 -1 204 209 0 23 chr17 38755021 38755064 -46683416 + C-rich Low_complexity Low_complexity 1 42 0 2429 197 32 38 chr17 38757242 38757842 -46680638 + MER21B LTR ERV1 98 693 -170 231 161 32 32 chr17 38757842 38757904 -46680576 - Tigger5 DNA MER2_type 0 2323 2262 1800 176 3 0 chr17 38757905 38758201 -46680279 + AluJo SINE Alu 1 297 -15 2025 124 0 7 chr17 38758206 38758504 -46679976 + AluSx SINE Alu 1 296 -16 229 200 0 0 chr17 38758551 38758593 -46679887 - Tigger5 DNA MER2_type -2268 55 14 331 233 0 0 chr17 38758593 38758666 -46679814 - Tigger5 DNA MER2_type 0 2323 2251 262 200 0 0 chr17 38758635 38758690 -46679790 - Tigger5 DNA MER2_type -2268 55 1 * 483 233 17 8 chr17 38758690 38758809 -46679671 + MER21B LTR ERV1 692 811 -52 1851 157 7 16 chr17 38759410 38759546 -46678934 + AluSx SINE Alu 1 137 -175 2185 108 3 0 chr17 38759546 38759842 -46678638 + AluSx SINE Alu 1 297 -15 1851 157 7 16 chr17 38759842 38760010 -46678470 + AluSx SINE Alu 137 302 -10 1092 163 0 0 chr17 38760010 38760176 -46678304 + AluJb SINE Alu 134 299 -13 410 270 54 20 chr17 38760513 38760661 -46677819 + L2 LINE L2 3154 3306 -7 248 70 23 0 chr17 38760726 38760769 -46677711 + (TA)n Simple_repeat Simple_repeat 1 44 0 688 175 83 0 chr17 38760777 38760897 -46677583 - FLAM_C SINE Alu -12 131 2 2289 67 0 0 chr17 38760902 38761230 -46677250 - AluY SINE Alu 0 328 1 355 267 340 31 chr17 38764289 38764342 -46674138 + L2 LINE L2 2804 2839 -474 2455 57 0 0 chr17 38764342 38764640 -46673840 - AluY SINE Alu -13 298 1 355 267 340 31 chr17 38764640 38764695 -46673785 + L2 LINE L2 2839 2876 -437 2029 81 48 0 chr17 38764695 38764994 -46673486 - AluSc SINE Alu 0 309 1 355 267 340 31 chr17 38764994 38765266 -46673214 + L2 LINE L2 2876 3303 -10 31 26 0 0 chr17 38765981 38766019 -46672461 + GC_rich Low_complexity Low_complexity 1 38 0 213 239 11 34 chr17 38766063 38766151 -46672329 + (CGGGG)n Simple_repeat Simple_repeat 1 86 0 232 265 69 59 chr17 38767696 38767798 -46670682 + MER91A DNA MER1_type 74 176 -20 22 0 0 0 chr17 38768190 38768212 -46670268 + GC_rich Low_complexity Low_complexity 1 22 0 302 235 29 69 chr17 38768594 38768696 -46669784 + MIR SINE MIR 21 118 -90 722 243 20 7 chr17 38770546 38770698 -46667782 + MIR3 SINE MIR 3 156 -52 215 61 30 0 chr17 38770977 38771010 -46667470 + (CCCCCT)n Simple_repeat Simple_repeat 1 34 0 24 53 0 0 chr17 38771442 38771480 -46667000 + GC_rich Low_complexity Low_complexity 1 38 0 212 250 0 18 chr17 38772529 38772585 -46665895 + GA-rich Low_complexity Low_complexity 2 56 0 24 0 0 0 chr17 38772830 38772854 -46665626 + GC_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr17 38772910 38772950 -46665530 + GC_rich Low_complexity Low_complexity 1 40 0 1970 135 0 16 chr17 38773471 38773774 -46664706 - AluJo SINE Alu -14 298 1 37 23 0 0 chr17 38773991 38774035 -46664445 + GC_rich Low_complexity Low_complexity 1 44 0 242 132 19 0 chr17 38774220 38774273 -46664207 + (CGGGG)n Simple_repeat Simple_repeat 5 58 0 416 340 86 50 chr17 38774491 38774770 -46663710 - L3b LINE CR1 -101 1482 1194 417 236 42 116 chr17 38774805 38775021 -46663459 - L3 LINE CR1 -14 1563 1364 22 56 0 0 chr17 38775184 38775220 -46663260 + GC_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr17 38775490 38775521 -46662959 + GC_rich Low_complexity Low_complexity 1 31 0 380 293 0 53 chr17 38776689 38776822 -46661658 + MIR SINE MIR 59 184 -78 2270 64 4 0 chr17 38776886 38777200 -46661280 - AluSx SINE Alu 0 315 1 423 162 19 9 chr17 38777893 38777998 -46660482 + GA-rich Low_complexity Low_complexity 2 107 0 332 309 0 10 chr17 38778046 38778143 -46660337 + MIR SINE MIR 74 169 -93 245 152 20 19 chr17 38778445 38778557 -46659923 + GA-rich Low_complexity Low_complexity 1 112 0 251 293 0 38 chr17 38778966 38779072 -46659408 + (CTGGGG)n Simple_repeat Simple_repeat 1 102 0 214 361 0 22 chr17 38779017 38779197 -46659283 + (TTGGGG)n Simple_repeat Simple_repeat 5 180 0 * 331 300 11 22 chr17 38779148 38779328 -46659152 + (CTGGGG)n Simple_repeat Simple_repeat 1 178 0 206 306 28 21 chr17 38779277 38779421 -46659059 + (TTGGGG)n Simple_repeat Simple_repeat 2 146 0 * 201 328 172 5 chr17 38780325 38780529 -46657951 - L2 LINE L2 -216 3056 2819 2321 76 3 7 chr17 38780529 38780833 -46657647 + AluSg SINE Alu 1 303 -7 375 262 82 12 chr17 38781444 38781570 -46656910 + MIR SINE MIR 5 140 -68 749 155 0 23 chr17 38782142 38782271 -46656209 + FLAM_C SINE Alu 1 126 -7 288 0 0 0 chr17 38782356 38782388 -46656092 + (T)n Simple_repeat Simple_repeat 1 32 0 186 330 75 21 chr17 38782535 38782629 -46655851 - MIR SINE MIR -57 151 53 2133 78 0 0 chr17 38783071 38783328 -46655152 - AluY SINE Alu -54 257 1 467 189 11 0 chr17 38783329 38783419 -46655061 - AluJb SINE Alu -99 213 123 1956 158 6 3 chr17 38783432 38783743 -46654737 - AluSx SINE Alu 0 312 1 2390 116 3 0 chr17 38784174 38784485 -46653995 + AluSx SINE Alu 1 312 0 651 128 0 0 chr17 38784485 38784594 -46653886 + (GA)n Simple_repeat Simple_repeat 1 109 0 1870 99 128 7 chr17 38784824 38785097 -46653383 + AluSg SINE Alu 2 307 -3 1015 136 0 0 chr17 38785097 38785237 -46653243 + AluSg/x SINE Alu 137 276 -36 192 40 0 0 chr17 38785238 38785263 -46653217 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 240 35 0 0 chr17 38785318 38785347 -46653133 + (TC)n Simple_repeat Simple_repeat 2 30 0 387 0 0 0 chr17 38785349 38785392 -46653088 + (CA)n Simple_repeat Simple_repeat 1 43 0 238 32 0 0 chr17 38785702 38785733 -46652747 - AluY SINE Alu -271 31 1 1769 184 0 16 chr17 38785766 38786075 -46652405 + AluJb SINE Alu 1 304 -8 2561 66 0 0 chr17 38786342 38786645 -46651835 + AluY SINE Alu 1 303 -8 2451 67 3 22 chr17 38786853 38787168 -46651312 - AluSc SINE Alu 0 309 1 695 114 23 68 chr17 38787168 38787300 -46651180 - AluSg SINE Alu -180 130 5 1106 121 24 18 chr17 38787306 38787472 -46651008 - AluSg/x SINE Alu -17 295 129 861 93 0 50 chr17 38787556 38787695 -46650785 - AluSg/x SINE Alu 0 312 181 599 173 8 30 chr17 38787697 38787830 -46650650 + AluJb SINE Alu 181 310 -2 391 150 17 0 chr17 38787989 38788049 -46650431 + AluSx SINE Alu 2 62 -239 1864 119 0 0 chr17 38788149 38788392 -46650088 + AluSx SINE Alu 57 299 -13 289 328 145 28 chr17 38788545 38789076 -46649404 + L2 LINE L2 1057 1649 -1665 611 209 78 114 chr17 38789137 38789190 -46649290 - Charlie4a DNA MER1_type -1453 508 455 1999 91 80 11 chr17 38789190 38789477 -46649003 - AluSx SINE Alu -3 309 3 611 209 78 114 chr17 38789477 38789669 -46648811 - Charlie4a DNA MER1_type -1506 455 274 1945 135 7 43 chr17 38789669 38789973 -46648507 - AluJo SINE Alu -18 294 2 611 209 78 114 chr17 38789973 38790033 -46648447 - Charlie4a DNA MER1_type -1687 274 213 2223 119 10 0 chr17 38790479 38790781 -46647699 - AluSx SINE Alu -7 305 1 2059 167 0 0 chr17 38790820 38791119 -46647361 - AluJb SINE Alu -13 299 1 282 141 0 18 chr17 38791255 38791319 -46647161 + MIR SINE MIR 74 137 -71 * 323 296 0 11 chr17 38791312 38791400 -46647080 - L2 LINE L2 0 3272 3186 2348 113 3 0 chr17 38791950 38792260 -46646220 - AluSq SINE Alu -2 311 1 803 178 0 0 chr17 38792297 38792415 -46646065 - AluJb SINE Alu -194 118 1 1670 162 33 39 chr17 38792649 38792982 -46645498 + MER21B LTR ERV1 363 693 -170 258 161 32 32 chr17 38792982 38793044 -46645436 - Tigger5 DNA MER2_type 0 2323 2262 1906 172 3 0 chr17 38793045 38793341 -46645139 + AluJo SINE Alu 1 297 -15 2225 122 0 0 chr17 38793346 38793642 -46644838 + AluSx SINE Alu 1 296 -16 250 200 0 0 chr17 38793689 38793731 -46644749 - Tigger5 DNA MER2_type -2268 55 14 361 233 0 0 chr17 38793731 38793804 -46644676 - Tigger5 DNA MER2_type 0 2323 2251 528 225 17 8 chr17 38793827 38793947 -46644533 + MER21B LTR ERV1 691 811 -52 1944 157 7 16 chr17 38794548 38794684 -46643796 + AluSx SINE Alu 1 137 -175 2290 108 3 0 chr17 38794684 38794980 -46643500 + AluSx SINE Alu 1 297 -15 1944 157 7 16 chr17 38794980 38795149 -46643331 + AluSx SINE Alu 137 303 -9 1140 163 0 0 chr17 38795149 38795315 -46643165 + AluJb SINE Alu 134 299 -13 288 0 0 0 chr17 38795656 38795688 -46642792 + (T)n Simple_repeat Simple_repeat 1 32 0 255 366 67 0 chr17 38795800 38795934 -46642546 - MIR SINE MIR -74 188 46 347 316 17 8 chr17 38796442 38796559 -46641921 - MIR3 SINE MIR -49 159 42 2262 113 3 0 chr17 38798933 38799234 -46639246 - AluSx SINE Alu -10 302 1 1255 79 0 67 chr17 38799559 38799737 -46638743 + AluSg/x SINE Alu 134 299 -11 302 331 77 24 chr17 38801292 38801461 -46637019 + MIR3 SINE MIR 25 202 -6 2559 58 0 10 chr17 38802144 38802453 -46636027 - AluY SINE Alu -5 306 1 1615 129 7 61 chr17 38802970 38803061 -46635419 + AluJo SINE Alu 37 131 -181 2312 103 14 0 chr17 38803061 38803353 -46635127 - AluSg SINE Alu -14 296 1 2378 105 0 0 chr17 38803360 38803665 -46634815 - AluSq SINE Alu -7 306 2 1615 129 7 61 chr17 38803665 38803844 -46634636 + AluJo SINE Alu 137 300 -12 1924 128 0 11 chr17 38804176 38804442 -46634038 - AluSx SINE Alu -49 263 1 476 222 60 0 chr17 38804445 38804562 -46633918 + MIR3 SINE MIR 82 205 -3 190 289 0 0 chr17 38805464 38805509 -46632971 - MIR SINE MIR -56 206 162 2412 89 3 0 chr17 38805519 38805812 -46632668 - AluSp SINE Alu -15 298 5 992 94 0 8 chr17 38805989 38806117 -46632363 + AluSg/x SINE Alu 167 293 -19 868 168 0 0 chr17 38806191 38806316 -46632164 + FLAM_C SINE Alu 1 125 -18 47 0 0 0 chr17 38806316 38806363 -46632117 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr17 38806546 38806566 -46631914 + (CCCCCT)n Simple_repeat Simple_repeat 3 22 0 23 0 0 0 chr17 38807505 38807528 -46630952 + AT_rich Low_complexity Low_complexity 1 23 0 324 0 0 0 chr17 38807743 38807779 -46630701 + (TG)n Simple_repeat Simple_repeat 1 36 0 321 26 0 0 chr17 38807828 38807866 -46630614 + (TG)n Simple_repeat Simple_repeat 2 39 0 330 87 0 0 chr17 38808105 38808151 -46630329 + (CCCCAG)n Simple_repeat Simple_repeat 5 50 0 23 33 0 0 chr17 38809066 38809096 -46629384 + AT_rich Low_complexity Low_complexity 1 30 0 210 37 0 0 chr17 38809110 38809137 -46629343 + (CTGTG)n Simple_repeat Simple_repeat 5 31 0 2195 112 0 11 chr17 38812464 38812775 -46625705 - AluSx SINE Alu 0 308 1 2323 93 0 29 chr17 38813554 38813865 -46624615 + AluSx SINE Alu 1 302 -10 2294 108 7 0 chr17 38814820 38815115 -46623365 - AluSg SINE Alu -13 297 1 1660 163 13 35 chr17 38815700 38816013 -46622467 + AluJb SINE Alu 1 306 -6 2016 136 10 7 chr17 38816562 38816857 -46621623 - AluSx SINE Alu -16 296 1 878 113 73 0 chr17 38816857 38816981 -46621499 - AluSq/x SINE Alu -176 136 4 2516 81 0 0 chr17 38817671 38817967 -46620513 + AluSx SINE Alu 1 296 -16 180 0 0 0 chr17 38819600 38819620 -46618860 + (CAGGA)n Simple_repeat Simple_repeat 1 20 0 1549 198 30 0 chr17 38819918 38820221 -46618259 - AluJo SINE Alu 0 312 1 1809 103 0 36 chr17 38820405 38820490 -46617990 + AluSx SINE Alu 54 140 -172 2457 86 3 0 chr17 38820490 38820792 -46617688 + AluSx SINE Alu 1 303 -9 1809 103 0 36 chr17 38820792 38820959 -46617521 + AluSx SINE Alu 140 297 -15 961 183 0 6 chr17 38820959 38821128 -46617352 + FRAM SINE Alu 1 165 -11 249 57 0 0 chr17 38821188 38821223 -46617257 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1077 104 0 0 chr17 38821919 38822054 -46616426 + AluJo SINE Alu 1 135 -177 2478 81 3 0 chr17 38822054 38822362 -46616118 + AluSq SINE Alu 1 309 -4 1055 151 42 0 chr17 38822896 38823062 -46615418 - FRAM SINE Alu -7 169 1 323 303 30 23 chr17 38823177 38823309 -46615171 - MIR3 SINE MIR -70 138 6 394 300 5 43 chr17 38823357 38823567 -46614913 + MARNA DNA Mariner 162 363 -223 353 240 43 94 chr17 38824162 38824509 -46613971 + L1MCa LINE L1 1906 2215 -4211 252 81 81 0 chr17 38824509 38824583 -46613897 + (TA)n Simple_repeat Simple_repeat 1 80 0 1544 151 107 0 chr17 38824583 38824835 -46613645 - AluJb SINE Alu -23 289 11 502 241 166 76 chr17 38824861 38825066 -46613414 + L1MC4 LINE L1 7311 7496 -546 2252 104 10 3 chr17 38825066 38825364 -46613116 + AluSp SINE Alu 1 300 -13 502 241 166 76 chr17 38825364 38825410 -46613070 + L1MC4 LINE L1 7496 7536 -506 192 40 0 0 chr17 38825410 38825435 -46613045 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 502 241 166 76 chr17 38825435 38825703 -46612777 + L1MC4 LINE L1 7536 7978 -64 2019 135 0 32 chr17 38827923 38828235 -46610245 + AluSx SINE Alu 11 312 0 304 310 60 60 chr17 38828345 38828529 -46609951 + L1ME4a LINE L1 5769 5952 -169 2178 84 34 0 chr17 38829116 38829413 -46609067 - AluSp SINE Alu -6 307 1 216 97 0 0 chr17 38830143 38830174 -46608306 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1863 173 0 22 chr17 38830190 38830332 -46608148 + AluJo SINE Alu 1 145 -167 2447 67 10 3 chr17 38830332 38830632 -46607848 + AluY SINE Alu 1 302 -9 1863 173 0 22 chr17 38830632 38830729 -46607751 + AluJo SINE Alu 145 305 -7 467 139 0 0 chr17 38830729 38830801 -46607679 + Alu SINE Alu 234 305 -7 2402 112 0 0 chr17 38830804 38831109 -46607371 + AluSq SINE Alu 1 305 -8 2397 72 3 3 chr17 38831557 38831849 -46606631 + AluSc SINE Alu 1 292 -17 1993 123 50 13 chr17 38832965 38833266 -46605214 + AluSx SINE Alu 1 312 0 23 0 0 0 chr17 38833297 38833320 -46605160 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 38833328 38833349 -46605131 + AT_rich Low_complexity Low_complexity 1 21 0 2432 91 0 0 chr17 38833349 38833647 -46604833 + AluSc SINE Alu 1 298 -11 938 135 0 0 chr17 38833797 38833930 -46604550 - FLAM_C SINE Alu 0 133 1 2374 104 0 0 chr17 38834229 38834528 -46603952 - AluSx SINE Alu -13 299 1 1050 119 83 67 chr17 38834539 38834732 -46603748 - AluJo SINE Alu 0 312 117 516 198 0 0 chr17 38834753 38834844 -46603636 + FRAM SINE Alu 69 159 -17 2242 110 0 7 chr17 38834868 38835167 -46603313 - AluSq SINE Alu -16 297 1 2118 157 0 0 chr17 38835191 38835503 -46602977 - AluSx SINE Alu 0 312 1 1390 199 50 17 chr17 38835594 38835891 -46602589 - AluJo SINE Alu 0 312 6 28 22 0 22 chr17 38836143 38836174 -46602306 + AT_rich Low_complexity Low_complexity 1 32 -13 2190 122 0 10 chr17 38836174 38836470 -46602010 - AluSx SINE Alu -19 293 1 28 22 0 22 chr17 38836470 38836484 -46601996 + AT_rich Low_complexity Low_complexity 32 45 0 2525 61 0 3 chr17 38836607 38836904 -46601576 + AluY SINE Alu 1 296 -15 1824 167 0 0 chr17 38837280 38837591 -46600889 + AluJb SINE Alu 9 319 0 2228 113 0 32 chr17 38837596 38837905 -46600575 + AluSx SINE Alu 3 301 -11 2360 108 0 0 chr17 38837907 38838213 -46600267 + AluSg SINE Alu 3 308 -2 1032 137 0 71 chr17 38838669 38838682 -46599798 + AluSg/x SINE Alu 120 132 -178 216 0 0 0 chr17 38838682 38838706 -46599774 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 1032 137 0 71 chr17 38838706 38838789 -46599691 + AluSg/x SINE Alu 132 198 -112 2398 83 3 0 chr17 38838789 38839090 -46599390 + AluY SINE Alu 1 302 -9 1032 137 0 71 chr17 38839090 38839189 -46599291 + AluSg/x SINE Alu 198 302 -8 649 110 0 0 chr17 38839191 38839282 -46599198 + AluSg/x SINE Alu 206 296 -14 2413 100 0 0 chr17 38839719 38840020 -46598460 - AluSx SINE Alu -11 301 1 2139 137 3 13 chr17 38840713 38841019 -46597461 + AluJb SINE Alu 1 303 -9 263 315 90 0 chr17 38841280 38841369 -46597111 - L2 LINE L2 -1 3271 3175 1301 147 11 0 chr17 38841385 38841575 -46596905 - AluJb SINE Alu -120 192 1 286 321 69 8 chr17 38841854 38841985 -46596495 + L2 LINE L2 2139 2277 -1037 713 189 33 50 chr17 38842048 38842184 -46596296 + MER5B DNA MER1_type 1 135 -43 2351 74 3 17 chr17 38842184 38842480 -46596000 + AluSp SINE Alu 1 292 -21 713 189 33 50 chr17 38842480 38842523 -46595957 + MER5B DNA MER1_type 135 177 -1 251 330 90 47 chr17 38842638 38842871 -46595609 + MIR SINE MIR 20 262 0 2330 168 70 71 chr17 38842898 38843271 -46595209 - L1MC4a LINE L1 0 7808 7436 2050 118 20 0 chr17 38843271 38843567 -46594913 + AluSq SINE Alu 1 302 -11 2330 168 70 71 chr17 38843567 38843675 -46594805 - L1MC4a LINE L1 -372 7436 7329 816 164 0 16 chr17 38843675 38843803 -46594677 + FLAM_C SINE Alu 2 127 -6 2077 112 0 59 chr17 38843807 38844129 -46594351 + AluSx SINE Alu 1 303 -9 2330 168 70 71 chr17 38844129 38844260 -46594220 - L1MC4a LINE L1 -482 7326 7191 22 70 0 0 chr17 38844659 38844702 -46593778 + GC_rich Low_complexity Low_complexity 1 43 0 544 188 215 0 chr17 38845213 38845357 -46593123 + MER96 DNA MER1_type? 1 175 0 1763 163 20 10 chr17 38845987 38846282 -46592198 + AluJo SINE Alu 1 298 -14 2067 130 10 3 chr17 38846282 38846580 -46591900 + AluSx SINE Alu 1 301 -11 2099 125 7 0 chr17 38846583 38846880 -46591600 + AluSx SINE Alu 1 299 -13 298 207 43 165 chr17 38846964 38847128 -46591352 + L2 LINE L2 3166 3309 -4 1935 149 7 10 chr17 38847309 38847610 -46590870 + AluSq SINE Alu 1 300 -13 2007 148 0 7 chr17 38847763 38848061 -46590419 + AluJb SINE Alu 3 298 -14 1643 124 60 23 chr17 38848253 38848519 -46589961 + AluSx SINE Alu 12 287 -25 1383 184 54 40 chr17 38849104 38849216 -46589264 + AluJo SINE Alu 3 112 -201 2380 72 10 0 chr17 38849216 38849507 -46588973 + AluSc SINE Alu 1 294 -15 1383 184 54 40 chr17 38849507 38849701 -46588779 + AluJo SINE Alu 112 313 0 1619 97 14 0 chr17 38849755 38849962 -46588518 + AluY SINE Alu 85 294 -17 378 96 0 0 chr17 38850013 38850065 -46588415 - AluSp/q SINE Alu -10 293 242 2841 7 0 0 chr17 38850165 38850465 -46588015 - AluY SINE Alu -11 300 1 1875 136 27 30 chr17 38850793 38851088 -46587392 - AluSx SINE Alu -18 294 1 1845 102 66 36 chr17 38851295 38851596 -46586884 + AluSq SINE Alu 1 309 0 717 165 8 15 chr17 38851686 38851819 -46586661 + FRAM SINE Alu 1 40 0 654 212 0 9 chr17 38851855 38851968 -46586512 + FLAM_C SINE Alu 7 118 -25 1704 168 3 41 chr17 38852020 38852156 -46586324 + AluJo SINE Alu 1 123 -189 2281 57 7 4 chr17 38852156 38852466 -46586014 + AluY SINE Alu 1 311 0 1704 168 3 41 chr17 38852466 38852619 -46585861 + AluJo SINE Alu 123 280 -32 1410 164 105 42 chr17 38852621 38852725 -46585755 + AluSg SINE Alu 7 103 -207 2429 84 3 0 chr17 38852725 38853024 -46585456 + AluSp SINE Alu 1 300 -13 2491 56 0 13 chr17 38853027 38853329 -46585151 + AluY SINE Alu 3 300 -11 1410 164 105 42 chr17 38853329 38853506 -46584974 + AluSg SINE Alu 104 310 0 207 218 0 0 chr17 38853507 38853562 -46584918 + GA-rich Low_complexity Low_complexity 2 56 0 1146 142 6 0 chr17 38853626 38853795 -46584685 + AluSx SINE Alu 1 170 -142 2257 205 35 33 chr17 38854129 38854189 -46584291 + L1ME1 LINE L1 5267 5325 -841 2234 114 10 0 chr17 38854189 38854486 -46583994 + AluSg SINE Alu 1 300 -10 2257 205 35 33 chr17 38854486 38855024 -46583456 + L1ME1 LINE L1 5325 5866 -300 1893 111 7 62 chr17 38855036 38855324 -46583156 + AluSx SINE Alu 1 272 -40 298 259 95 52 chr17 38855432 38855548 -46582932 - L2 LINE L2 -27 3286 3166 2099 125 7 0 chr17 38855632 38855929 -46582551 - AluSx SINE Alu -13 299 1 2067 130 10 3 chr17 38855932 38856231 -46582249 - AluSx SINE Alu -11 301 1 1763 163 20 10 chr17 38856231 38856525 -46581955 - AluJo SINE Alu -14 298 1 544 188 215 0 chr17 38857155 38857299 -46581181 - MER96 DNA MER1_type? 0 175 1 22 70 0 0 chr17 38857810 38857853 -46580627 + GC_rich Low_complexity Low_complexity 1 43 0 2330 168 70 71 chr17 38858252 38858383 -46580097 + L1MC4a LINE L1 7191 7321 -487 2077 112 0 59 chr17 38858383 38858705 -46579775 - AluSx SINE Alu -9 303 1 816 164 0 16 chr17 38858709 38858837 -46579643 - FLAM_C SINE Alu -6 127 2 2330 168 70 71 chr17 38858837 38858945 -46579535 + L1MC4a LINE L1 7324 7431 -377 2050 118 20 0 chr17 38858945 38859241 -46579239 - AluSq SINE Alu -11 302 1 2330 168 70 71 chr17 38859241 38859614 -46578866 + L1MC4a LINE L1 7431 7808 0 251 330 90 47 chr17 38859641 38859874 -46578606 - MIR SINE MIR 0 262 20 713 189 33 50 chr17 38859989 38860032 -46578448 - MER5B DNA MER1_type -1 177 135 2351 74 3 17 chr17 38860032 38860328 -46578152 - AluSp SINE Alu -21 292 1 713 189 33 50 chr17 38860328 38860464 -46578016 - MER5B DNA MER1_type -43 135 1 286 321 69 8 chr17 38860527 38860658 -46577822 - L2 LINE L2 -1037 2277 2139 1832 195 0 6 chr17 38860937 38861250 -46577230 + AluJb SINE Alu 1 311 -1 212 219 47 31 chr17 38863123 38863187 -46575293 - MIR SINE MIR -16 246 182 1368 101 0 0 chr17 38863194 38863372 -46575108 - AluY SINE Alu -14 297 120 434 193 193 18 chr17 38863485 38863599 -46574881 + L2 LINE L2 3178 3311 -2 520 302 90 36 chr17 38863683 38863905 -46574575 - MIR SINE MIR -20 242 9 530 123 0 0 chr17 38864407 38864480 -46574000 + AluSg/x SINE Alu 196 268 -42 22 0 0 0 chr17 38864492 38864514 -46573966 + AT_rich Low_complexity Low_complexity 1 22 0 1331 218 95 3 chr17 38865200 38865484 -46572996 + AluJo SINE Alu 1 310 -2 297 287 10 47 chr17 38865532 38865685 -46572795 - MIR SINE MIR -65 143 1 1064 91 168 96 chr17 38865687 38865884 -46572596 - AluJb SINE Alu -15 297 87 248 288 0 27 chr17 38866544 38866617 -46571863 + MIR SINE MIR 36 106 -102 218 344 107 8 chr17 38866693 38866826 -46571654 - MIR SINE MIR -57 151 5 2328 90 7 0 chr17 38868074 38868363 -46570117 - AluSp SINE Alu -22 291 1 2300 90 7 7 chr17 38868363 38868673 -46569807 - AluSx SINE Alu -2 310 1 2190 108 0 13 chr17 38868731 38869036 -46569444 - AluY SINE Alu -10 301 1 1922 162 10 7 chr17 38869038 38869334 -46569146 - AluJb SINE Alu -15 297 1 2341 115 0 6 chr17 38869388 38869702 -46568778 - AluSx SINE Alu 0 312 1 234 276 87 24 chr17 38870059 38870186 -46568294 - L2 LINE L2 -652 2662 2528 640 201 146 7 chr17 38870318 38870462 -46568018 - FRAM SINE Alu -2 164 1 1266 150 0 41 chr17 38870488 38870647 -46567833 - AluSg/x SINE Alu -17 293 144 2078 88 35 18 chr17 38870647 38870931 -46567549 - AluSc SINE Alu -15 294 6 1266 150 0 41 chr17 38870931 38870991 -46567489 - AluSg/x SINE Alu -166 144 83 668 137 0 0 chr17 38870991 38871086 -46567394 - AluSg/x SINE Alu -62 250 156 33 68 0 0 chr17 38871195 38871239 -46567241 + GC_rich Low_complexity Low_complexity 1 44 0 1723 140 4 36 chr17 38873619 38873796 -46564684 - AluJb SINE Alu 0 311 146 2403 95 3 0 chr17 38873796 38874100 -46564380 - AluY SINE Alu -6 305 1 1723 140 4 36 chr17 38874100 38874229 -46564251 - AluJb SINE Alu -165 146 14 2007 134 7 7 chr17 38874729 38875019 -46563461 + AluSx SINE Alu 1 290 -22 1945 121 0 60 chr17 38875181 38875503 -46562977 + AluSg SINE Alu 2 305 0 219 327 45 9 chr17 38875781 38875891 -46562589 - L2 LINE L2 -652 2662 2549 1148 214 0 18 chr17 38875928 38876152 -46562328 + AluJo SINE Alu 1 220 -92 277 173 0 0 chr17 38876310 38876362 -46562118 + Alu SINE Alu 250 301 -1 228 273 0 0 chr17 38876366 38876410 -46562070 + G-rich Low_complexity Low_complexity 5 48 0 2220 126 3 0 chr17 38876544 38876853 -46561627 - AluSx SINE Alu -2 310 1 2439 60 3 0 chr17 38876863 38877179 -46561301 - AluSq SINE Alu 0 317 1 2210 114 3 0 chr17 38877907 38878206 -46560274 + AluSq SINE Alu 1 300 -13 537 219 124 78 chr17 38878277 38878519 -46559961 - MIR SINE MIR 0 262 10 182 182 0 121 chr17 38878675 38878741 -46559739 - MER5B DNA MER1_type -6 172 115 229 273 62 29 chr17 38879012 38879157 -46559323 - MIR SINE MIR -14 248 100 1849 152 31 10 chr17 38879158 38879447 -46559033 + AluJo SINE Alu 1 295 -17 1203 86 7 0 chr17 38879449 38879601 -46558879 + AluSx SINE Alu 1 153 -159 1970 66 58 0 chr17 38879603 38879846 -46558634 + AluSx SINE Alu 46 302 -10 284 253 297 0 chr17 38881375 38881466 -46557014 + MIR SINE MIR 124 241 -21 671 254 78 53 chr17 38881487 38881576 -46556904 + MIR SINE MIR 12 97 -165 2172 123 10 3 chr17 38881576 38881869 -46556611 + AluSx SINE Alu 1 295 -17 671 254 78 53 chr17 38881869 38882023 -46556457 + MIR SINE MIR 97 261 -1 474 264 45 45 chr17 38882135 38882313 -46556167 + MIR SINE MIR 23 200 -62 661 260 0 7 chr17 38882859 38883013 -46555467 + MIR SINE MIR 2 154 -108 1215 99 0 6 chr17 38883023 38883185 -46555295 + AluY SINE Alu 1 161 -150 1691 99 0 0 chr17 38883345 38883556 -46554924 + AluSg/x SINE Alu 87 297 -15 347 0 23 0 chr17 38883556 38883599 -46554881 + (TA)n Simple_repeat Simple_repeat 2 45 0 279 0 0 0 chr17 38883598 38883629 -46554851 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 403 347 136 30 chr17 38883637 38884165 -46554315 - L2 LINE L2 -957 2357 1774 491 123 25 0 chr17 38884172 38884244 -46554236 + FLAM_A SINE Alu 42 118 -193 221 0 35 0 chr17 38884244 38884273 -46554207 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 1852 149 16 23 chr17 38885876 38886184 -46552296 - AluJb SINE Alu -6 306 1 2450 92 7 0 chr17 38886571 38886876 -46551604 + AluSx SINE Alu 1 307 -5 487 350 56 42 chr17 38887232 38887735 -46550745 - L2 LINE L2 -2 3270 2764 2217 109 3 0 chr17 38888003 38888287 -46550193 + AluSx SINE Alu 13 297 -15 26 30 0 0 chr17 38889064 38889097 -46549383 + AT_rich Low_complexity Low_complexity 1 33 0 2487 70 0 0 chr17 38889184 38889485 -46548995 + AluY SINE Alu 6 306 -5 1897 148 6 49 chr17 38890173 38890312 -46548168 + AluJo SINE Alu 1 144 -168 2025 158 0 6 chr17 38890312 38890623 -46547857 + AluJb SINE Alu 1 309 -3 1897 148 6 49 chr17 38890623 38890807 -46547673 + AluJo SINE Alu 144 310 -2 1844 151 0 33 chr17 38890811 38891116 -46547364 + AluJo SINE Alu 1 295 -17 2457 88 3 16 chr17 38894105 38894422 -46544058 + AluSp SINE Alu 1 313 0 2268 102 0 26 chr17 38894435 38894748 -46543732 + AluY SINE Alu 2 306 -5 2290 78 4 0 chr17 38894959 38895240 -46543240 + AluSx SINE Alu 25 306 -6 242 322 103 26 chr17 38895325 38895558 -46542922 - L2 LINE L2 -1894 1420 1170 554 135 117 9 chr17 38895894 38896005 -46542475 + AluJo SINE Alu 20 142 -170 1508 158 69 43 chr17 38896007 38896310 -46542170 + AluJb SINE Alu 2 312 0 456 148 0 0 chr17 38897624 38897705 -46540775 - AluJ/FRAM SINE Alu 0 312 232 1493 136 3 105 chr17 38898309 38898595 -46539885 - AluJo SINE Alu -21 291 35 216 0 0 0 chr17 38899616 38899640 -46538840 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2190 103 0 4 chr17 38899643 38899924 -46538556 - AluSg SINE Alu -30 280 1 682 94 28 0 chr17 38899926 38900032 -46538448 - AluSc SINE Alu -11 298 190 2053 153 0 0 chr17 38900199 38900493 -46537987 + AluJo SINE Alu 1 294 -18 2399 106 3 0 chr17 38900495 38900806 -46537674 + AluSx SINE Alu 1 312 0 2159 120 7 3 chr17 38901447 38901747 -46536733 - AluSx SINE Alu -11 301 1 222 234 31 0 chr17 38903793 38903857 -46534623 + G-rich Low_complexity Low_complexity 2 67 0 323 316 129 41 chr17 38905886 38906303 -46532177 + L2 LINE L2 2325 2778 -536 348 341 22 22 chr17 38906357 38906583 -46531897 + L2 LINE L2 2870 3095 -177 225 269 108 62 chr17 38907700 38907830 -46530650 - MIR SINE MIR -70 192 57 21 0 0 0 chr17 38908104 38908125 -46530355 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 38908274 38908295 -46530185 + GC_rich Low_complexity Low_complexity 1 21 0 203 216 20 20 chr17 38908641 38908692 -46529788 + CT-rich Low_complexity Low_complexity 1 51 0 419 204 133 0 chr17 38908832 38908930 -46529550 + L2 LINE L2 3182 3292 -21 * 423 335 83 17 chr17 38908923 38909153 -46529327 - MIR SINE MIR -15 247 3 2207 108 0 14 chr17 38909282 38909578 -46528902 - AluSx SINE Alu -20 292 1 776 194 123 4 chr17 38909730 38909914 -46528566 - MER20 DNA MER1_type -1 218 1 236 233 138 52 chr17 38909949 38910065 -46528415 + MIR SINE MIR 131 256 -6 2289 73 0 28 chr17 38912260 38912584 -46525896 + AluSx SINE Alu 1 316 0 1976 164 7 3 chr17 38912597 38912907 -46525573 + AluJo SINE Alu 1 311 -1 226 245 0 0 chr17 38913113 38913166 -46525314 + L2 LINE L2 3257 3309 -4 2526 77 3 3 chr17 38914231 38914541 -46523939 + AluSp SINE Alu 2 311 -2 2079 116 34 3 chr17 38914550 38914844 -46523636 + AluSx SINE Alu 1 303 -9 394 316 121 5 chr17 38914954 38915144 -46523336 + MIR SINE MIR 45 256 -6 916 150 19 28 chr17 38915248 38915461 -46523019 - L1MB2 LINE L1 -7 6164 5954 458 265 34 27 chr17 38915503 38915650 -46522830 + L2 LINE L2 3163 3310 -3 318 312 102 13 chr17 38915821 38915978 -46522502 + MIR SINE MIR 84 254 -8 2217 102 31 0 chr17 38916090 38916383 -46522097 - AluSx SINE Alu -10 302 1 2590 44 0 7 chr17 38916730 38917027 -46521453 - AluY SINE Alu -16 295 1 883 186 0 87 chr17 38917122 38917353 -46521127 - L1MC4 LINE L1 -3 8039 7829 263 225 191 11 chr17 38922193 38922282 -46516198 - L2 LINE L2 -1 3271 3167 2423 112 0 0 chr17 38922343 38922656 -46515824 + AluSq SINE Alu 1 313 0 2521 60 3 22 chr17 38922657 38922974 -46515506 + AluY SINE Alu 1 311 0 1441 113 28 0 chr17 38923778 38923990 -46514490 + AluSg SINE Alu 1 218 -92 907 116 24 24 chr17 38924090 38924146 -46514334 + Tigger4(Zombi) DNA MER2_type 2535 2590 -141 2357 97 0 3 chr17 38924146 38924446 -46514034 + AluSx SINE Alu 1 299 -13 907 116 24 24 chr17 38924446 38924553 -46513927 + Tigger4(Zombi) DNA MER2_type 2589 2698 -33 689 317 102 35 chr17 38925724 38926519 -46511961 + L2 LINE L2 2423 3271 -1 2216 117 10 3 chr17 38927263 38927561 -46510919 + AluSx SINE Alu 1 300 -12 2340 113 3 0 chr17 38927582 38927892 -46510588 + AluSx SINE Alu 1 311 -1 2131 157 0 0 chr17 38927906 38928211 -46510269 + AluJb SINE Alu 1 305 -7 1508 176 23 47 chr17 38928441 38928742 -46509738 - AluJo SINE Alu -18 294 1 454 285 68 51 chr17 38930949 38931184 -46507296 + LTR16C LTR ERVL 71 309 -182 386 290 30 15 chr17 38931244 38931375 -46507105 + MER94 DNA DNA 2 134 0 606 221 92 33 chr17 38931897 38931942 -46506538 + L1MC5 LINE L1 7632 7673 -288 2109 101 18 4 chr17 38931942 38932247 -46506233 - AluSc SINE Alu 0 309 1 606 221 92 33 chr17 38932247 38932439 -46506041 + L1MC5 LINE L1 7673 7885 -76 283 271 133 26 chr17 38932479 38932630 -46505850 + L1ME2 LINE L1 5997 6163 -1 281 263 66 46 chr17 38932641 38932793 -46505687 + L1MC5 LINE L1 7771 7925 -36 2416 72 7 0 chr17 38932823 38933115 -46505365 + AluSc SINE Alu 6 299 -10 567 301 83 18 chr17 38933152 38933381 -46505099 - MIR SINE MIR 0 262 19 791 125 15 37 chr17 38933457 38933593 -46504887 - FLAM_C SINE Alu 0 133 1 1696 134 86 4 chr17 38933604 38933873 -46504607 - AluJo SINE Alu -20 292 2 775 223 52 16 chr17 38933891 38934084 -46504396 + MIR SINE MIR 63 262 0 2454 62 3 0 chr17 38934159 38934447 -46504033 - AluSx SINE Alu -23 289 1 273 276 53 0 chr17 38934480 38934556 -46503924 - MIR SINE MIR -62 146 67 2294 80 0 35 chr17 38935384 38935698 -46502782 + AluSx SINE Alu 4 306 -6 2233 85 11 4 chr17 38935698 38935979 -46502501 + AluSg SINE Alu 1 283 -27 582 249 139 9 chr17 38936018 38936300 -46502180 - L2 LINE L2 -277 3036 2727 533 175 7 42 chr17 38936311 38936454 -46502026 - L1MB8 LINE L1 -1 6177 6040 386 204 15 7 chr17 38936456 38936542 -46501938 - AluJ/FLAM SINE Alu -238 64 1 997 195 5 25 chr17 38936610 38936810 -46501670 - AluJb SINE Alu -15 297 102 354 109 0 0 chr17 38936810 38936865 -46501615 + Alu SINE Alu 242 296 -5 296 327 64 40 chr17 38937060 38937357 -46501123 - L1ME LINE L1 -466 5655 5352 202 157 20 20 chr17 38937576 38937627 -46500853 + CT-rich Low_complexity Low_complexity 2 52 0 297 0 0 0 chr17 38937658 38937691 -46500789 + (TG)n Simple_repeat Simple_repeat 2 34 0 2148 108 35 0 chr17 38937704 38937991 -46500489 - AluSx SINE Alu -15 297 1 554 218 0 104 chr17 38937992 38938009 -46500471 + L2 LINE L2 3141 3158 -155 2133 149 0 0 chr17 38938009 38938305 -46500175 - AluSx SINE Alu -16 296 1 554 218 0 104 chr17 38938305 38938480 -46500000 + L2 LINE L2 3158 3313 0 1990 141 28 0 chr17 38939412 38939703 -46498777 - AluJb SINE Alu -13 299 1 1718 180 7 3 chr17 38940147 38940442 -46498038 - AluJo SINE Alu -15 297 2 1981 124 28 7 chr17 38940607 38940742 -46497738 + AluSx SINE Alu 1 132 -180 2265 128 0 0 chr17 38940742 38941040 -46497440 + AluSx SINE Alu 1 298 -14 1981 124 28 7 chr17 38941040 38941195 -46497285 + AluSx SINE Alu 132 297 -15 1703 156 7 7 chr17 38941760 38942076 -46496404 - AluJb SINE Alu 0 316 1 2474 93 0 3 chr17 38942777 38943090 -46495390 - AluSx SINE Alu 0 312 1 279 296 102 0 chr17 38943736 38943844 -46494636 + MIR3 SINE MIR 75 193 -15 2101 126 0 3 chr17 38943966 38944272 -46494208 - AluSx SINE Alu 0 305 1 1988 137 0 14 chr17 38944272 38944565 -46493915 - AluSx SINE Alu -10 302 14 547 140 54 0 chr17 38945437 38945530 -46492950 + U6 snRNA snRNA 5 102 -5 38 0 0 0 chr17 38945531 38945569 -46492911 + AT_rich Low_complexity Low_complexity 1 38 0 198 103 0 0 chr17 38945611 38945640 -46492840 + (A)n Simple_repeat Simple_repeat 1 29 0 963 163 118 0 chr17 38945663 38945841 -46492639 + AluSg/x SINE Alu 105 303 -9 2133 118 3 0 chr17 38945848 38946159 -46492321 + AluSc SINE Alu 1 309 0 2415 54 0 0 chr17 38946166 38946444 -46492036 + AluY SINE Alu 34 311 0 185 348 27 37 chr17 38946465 38946652 -46491828 + L2 LINE L2 1879 2063 -1251 226 348 125 47 chr17 38946954 38947273 -46491207 + L2 LINE L2 2633 2976 -338 874 264 81 51 chr17 38947563 38947703 -46490777 + MLT1H LTR MaLR 39 173 -376 2246 120 7 0 chr17 38947703 38948012 -46490468 + AluSx SINE Alu 1 311 -1 874 264 81 51 chr17 38948012 38948341 -46490139 + MLT1H LTR MaLR 173 522 -27 1692 186 10 35 chr17 38948343 38948655 -46489825 - AluJo SINE Alu -1 311 8 890 269 35 31 chr17 38948709 38948773 -46489707 - MIR SINE MIR 0 262 200 2524 83 0 0 chr17 38948773 38949074 -46489406 + AluY SINE Alu 1 301 -10 890 269 35 31 chr17 38949074 38949269 -46489211 - MIR SINE MIR -62 200 2 2244 105 3 13 chr17 38949382 38949688 -46488792 - AluSq SINE Alu -10 303 1 192 83 62 21 chr17 38950376 38950424 -46488056 + GA-rich Low_complexity Low_complexity 2 51 0 1856 180 7 0 chr17 38950632 38950927 -46487553 + AluJb SINE Alu 1 297 -15 948 180 0 29 chr17 38950934 38951085 -46487395 + AluJb SINE Alu 144 291 -21 2326 114 3 0 chr17 38951085 38951393 -46487087 + AluSx SINE Alu 1 309 -3 948 180 0 29 chr17 38951393 38951413 -46487067 + AluJb SINE Alu 291 310 -2 1716 130 17 55 chr17 38952004 38952297 -46486183 - AluJb SINE Alu -30 282 1 769 269 0 0 chr17 38952396 38952567 -46485913 - MER5B DNA MER1_type -7 171 1 562 290 26 0 chr17 38952809 38952964 -46485516 + MIR SINE MIR 48 206 -56 2037 152 0 3 chr17 38953117 38953413 -46485067 + AluSx SINE Alu 1 295 -17 199 159 16 127 chr17 38953672 38953735 -46484745 + L2 LINE L2 3175 3230 -42 2406 95 0 3 chr17 38953743 38954047 -46484433 - AluSq SINE Alu -10 303 1 1665 177 3 30 chr17 38954260 38954560 -46483920 - AluJo SINE Alu -20 292 1 181 208 132 0 chr17 38954680 38954733 -46483747 - MIR SINE MIR -64 144 85 301 209 115 71 chr17 38954850 38954948 -46483532 + L1ME4a LINE L1 5717 5809 -312 2285 106 3 0 chr17 38954948 38955240 -46483240 + AluSx SINE Alu 1 293 -19 301 209 115 71 chr17 38955240 38955323 -46483157 + L1ME4a LINE L1 5809 5906 -215 497 161 0 80 chr17 38955806 38955918 -46482562 - L1MB8 LINE L1 -7 6171 6069 238 302 133 44 chr17 38956011 38956094 -46482386 + L2 LINE L2 3027 3101 -171 2258 100 10 3 chr17 38956094 38956385 -46482095 - AluSp SINE Alu -20 293 1 238 302 133 44 chr17 38956385 38956526 -46481954 + L2 LINE L2 3101 3271 -1 262 343 47 23 chr17 38956599 38956771 -46481709 + C-rich Low_complexity Low_complexity 4 179 0 942 107 0 0 chr17 38957678 38957800 -46480680 - AluJb SINE Alu -14 298 177 1659 79 0 0 chr17 38958612 38958814 -46479666 - AluSg SINE Alu -12 300 99 629 129 0 0 chr17 38959057 38959150 -46479330 - AluSg SINE Alu -216 94 2 1495 192 118 39 chr17 38959689 38960122 -46478358 + MLT1C LTR MaLR 1 467 0 1731 233 117 4 chr17 38960269 38960758 -46477722 - L1ME3A LINE L1 -5 6165 5622 273 57 0 0 chr17 38960759 38960794 -46477686 + (TC)n Simple_repeat Simple_repeat 2 36 0 721 117 10 0 chr17 38960867 38960970 -46477510 + FLAM_A SINE Alu 12 115 -27 3004 275 101 40 chr17 38961032 38961465 -46477015 - L2 LINE L2 -649 2665 2260 2463 68 14 0 chr17 38961465 38961761 -46476719 - AluSp SINE Alu -7 306 7 3004 275 101 40 chr17 38961761 38961814 -46476666 - L2 LINE L2 -1054 2260 2212 2771 27 0 0 chr17 38961814 38962115 -46476365 - AluY SINE Alu -10 301 1 3004 275 101 40 chr17 38962115 38963019 -46475461 - L2 LINE L2 -1102 2212 1188 562 241 54 83 chr17 38963549 38963790 -46474690 - MIR SINE MIR -26 236 3 1127 132 118 38 chr17 38964267 38964555 -46473925 + MER33 DNA MER1_type 1 311 -13 230 292 223 8 chr17 38964668 38964798 -46473682 + MIR3 SINE MIR 16 173 -35 258 253 30 20 chr17 38965286 38965385 -46473095 + (CGAG)n Simple_repeat Simple_repeat 1 100 0 288 0 0 0 chr17 38966300 38966332 -46472148 + (GA)n Simple_repeat Simple_repeat 1 32 0 1973 151 3 3 chr17 38966888 38967193 -46471287 - AluJb SINE Alu -1 311 7 2284 65 0 14 chr17 38967298 38967576 -46470904 - AluY SINE Alu -37 274 1 337 91 0 0 chr17 38967578 38967633 -46470847 + L1MB7 LINE L1 6114 6168 -16 2112 131 37 0 chr17 38968372 38968670 -46469810 - AluSx SINE Alu -3 309 1 233 241 12 24 chr17 38969359 38969442 -46469038 - L1MC5 LINE L1 -50 7911 7830 429 293 17 72 chr17 38970344 38970525 -46467955 - MIR SINE MIR -32 230 60 2308 114 3 0 chr17 38970979 38971286 -46467194 - AluSq SINE Alu -5 308 1 324 253 13 0 chr17 38971343 38971422 -46467058 - MIR SINE MIR 0 262 183 2192 198 24 4 chr17 38971463 38971927 -46466553 + L1MC4a LINE L1 6605 7077 -731 1875 119 53 30 chr17 38971936 38972221 -46466259 + L1MA8 LINE L1 5765 6063 -228 1980 144 10 17 chr17 38972221 38972520 -46465960 + AluJo SINE Alu 1 297 -15 1875 119 53 30 chr17 38972520 38972629 -46465851 + L1MA8 LINE L1 6063 6168 -123 969 216 0 0 chr17 38972630 38972801 -46465679 + FRAM SINE Alu 1 171 -5 197 274 142 0 chr17 38972813 38972919 -46465561 + L2 LINE L2 3193 3313 0 2001 142 17 0 chr17 38973082 38973370 -46465110 - AluSx SINE Alu -19 293 1 215 324 172 20 chr17 38976146 38976350 -46462130 - L2 LINE L2 -207 3065 2831 1164 149 11 0 chr17 38976746 38976921 -46461559 - AluSg/x SINE Alu -1 309 133 2296 105 10 0 chr17 38976922 38977228 -46461252 - AluSx SINE Alu -3 309 1 267 54 0 0 chr17 38977450 38977487 -46460993 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 606 187 0 72 chr17 38977487 38977626 -46460854 - FRAM SINE Alu -29 147 19 312 102 0 0 chr17 38977728 38977777 -46460703 + (TG)n Simple_repeat Simple_repeat 1 49 0 667 144 17 42 chr17 38978081 38978092 -46460388 + GA-rich Low_complexity Low_complexity 1 11 -516 2238 134 0 0 chr17 38978092 38978398 -46460082 + AluSx SINE Alu 1 306 -6 667 144 17 42 chr17 38978398 38978622 -46459858 + GA-rich Low_complexity Low_complexity 11 527 0 324 0 0 0 chr17 38978638 38978701 -46459779 + (CAAG)n Simple_repeat Simple_repeat 1 99 0 324 0 0 0 chr17 38978701 38978737 -46459743 + (CAAG)n Simple_repeat Simple_repeat 2 37 0 2555 84 0 0 chr17 38978737 38979046 -46459434 + AluSx SINE Alu 4 312 0 989 110 0 34 chr17 38979064 38979210 -46459270 + FLAM_C SINE Alu 3 143 0 385 262 0 0 chr17 38979218 38979302 -46459178 + AluJ/FRAM SINE Alu 219 302 0 1336 200 237 12 chr17 38979470 38979956 -46458524 + LTR61 LTR ERV1 1 595 0 2254 126 0 0 chr17 38980129 38980430 -46458050 + AluSx SINE Alu 1 301 -11 592 191 53 23 chr17 38980440 38980571 -46457909 + AluJo SINE Alu 3 137 -175 1282 108 0 0 chr17 38980671 38980838 -46457642 + AluY SINE Alu 133 299 -12 299 288 65 59 chr17 38981036 38981097 -46457383 + L2 LINE L2 3117 3176 -96 2330 112 3 0 chr17 38981097 38981401 -46457079 - AluSx SINE Alu -7 305 1 299 288 65 59 chr17 38981401 38981492 -46456988 + L2 LINE L2 3176 3270 -2 1939 157 0 23 chr17 38981653 38981958 -46456522 - AluJo SINE Alu -14 298 1 2339 114 0 13 chr17 38981966 38982144 -46456336 - AluSq SINE Alu -2 311 137 2223 130 0 0 chr17 38982144 38982445 -46456035 - AluSg1 SINE Alu -8 301 1 2339 114 0 13 chr17 38982445 38982581 -46455899 - AluSq SINE Alu -176 137 1 2234 93 0 42 chr17 38983402 38983714 -46454766 - AluSx SINE Alu -13 299 1 400 278 70 104 chr17 38984678 38984811 -46453669 + MIR SINE MIR 2 138 -124 2376 91 3 0 chr17 38984811 38985109 -46453371 + AluSp SINE Alu 1 299 -14 1977 101 0 22 chr17 38985113 38985409 -46453071 + AluSp SINE Alu 23 312 0 400 278 70 104 chr17 38985409 38985420 -46453060 + MIR SINE MIR 141 151 -111 2270 99 0 7 chr17 38985420 38985722 -46452758 + AluSq SINE Alu 1 300 -13 400 278 70 104 chr17 38985722 38985840 -46452640 + MIR SINE MIR 151 262 0 2489 76 0 0 chr17 38985948 38986250 -46452230 + AluY SINE Alu 1 302 -9 796 137 33 162 chr17 38986252 38986493 -46451987 - MER6B DNA MER2_type 0 210 1 445 306 137 9 chr17 38988963 38989182 -46449298 - MIR SINE MIR -3 259 13 1192 189 8 37 chr17 38992723 38992879 -46445601 - AluJb SINE Alu -18 294 146 1612 134 95 42 chr17 38992879 38993162 -46445318 - AluSx SINE Alu -14 298 1 1192 189 8 37 chr17 38993162 38993248 -46445232 - AluJb SINE Alu -166 146 59 699 172 167 48 chr17 38993494 38993621 -46444859 + MER3 DNA MER1_type 1 112 -97 357 24 0 0 chr17 38993621 38993663 -46444817 + (TA)n Simple_repeat Simple_repeat 2 43 0 1907 162 0 0 chr17 38993663 38993947 -46444533 - AluJb SINE Alu -28 284 1 699 172 167 48 chr17 38993947 38994004 -46444476 + MER3 DNA MER1_type 111 208 -1 424 206 284 26 chr17 38995625 38995819 -46442661 - HAL1b LINE L1 -27 1321 1078 244 45 0 45 chr17 38998689 38998733 -46439747 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 2295 105 16 0 chr17 38999937 39000241 -46438239 - AluSg SINE Alu -1 309 1 266 265 12 12 chr17 39002079 39002162 -46436318 + CT-rich Low_complexity Low_complexity 2 84 0 592 263 201 10 chr17 39002823 39003207 -46435273 + L1MC4a LINE L1 5716 6172 -1636 2400 97 7 0 chr17 39003953 39004262 -46434218 - AluSq SINE Alu -2 311 1 2358 100 3 0 chr17 39004947 39005247 -46433233 - AluSq SINE Alu -12 301 1 217 228 112 100 chr17 39005295 39005545 -46432935 + L2 LINE L2 1946 2198 -1116 1119 156 0 33 chr17 39005557 39005737 -46432743 - AluJb SINE Alu 0 312 139 995 180 0 23 chr17 39005837 39006009 -46432471 + FRAM SINE Alu 8 175 -1 874 264 81 51 chr17 39006011 39006340 -46432140 - MLT1H LTR MaLR -27 522 173 2246 120 7 0 chr17 39006340 39006649 -46431831 - AluSx SINE Alu -1 311 1 874 264 81 51 chr17 39006649 39006789 -46431691 - MLT1H LTR MaLR -376 173 39 226 348 125 47 chr17 39007079 39007398 -46431082 - L2 LINE L2 -338 2976 2633 185 348 27 37 chr17 39007700 39007887 -46430593 - L2 LINE L2 -1251 2063 1879 2385 58 0 0 chr17 39007908 39008186 -46430294 - AluY SINE Alu 0 311 34 2142 118 3 0 chr17 39008192 39008504 -46429976 - AluSc SINE Alu 0 309 1 963 163 118 0 chr17 39008511 39008689 -46429791 - AluSg/x SINE Alu -9 303 105 198 103 0 0 chr17 39008712 39008741 -46429739 + (T)n Simple_repeat Simple_repeat 1 29 0 38 0 0 0 chr17 39008783 39008821 -46429659 + AT_rich Low_complexity Low_complexity 1 38 0 533 151 54 0 chr17 39008822 39008915 -46429565 - U6 snRNA snRNA -5 102 5 1980 139 0 14 chr17 39009787 39010081 -46428399 + AluSx SINE Alu 14 303 -9 2095 126 0 3 chr17 39010081 39010387 -46428093 + AluSx SINE Alu 1 305 0 279 296 102 0 chr17 39010508 39010616 -46427864 - MIR3 SINE MIR -15 193 75 2358 83 0 7 chr17 39011263 39011564 -46426916 + AluSg SINE Alu 1 299 -11 2154 116 3 10 chr17 39012096 39012411 -46426069 + AluSg SINE Alu 1 313 0 388 247 12 0 chr17 39012412 39012493 -46425987 - MER63 DNA MER1_type -328 734 27 323 274 215 46 chr17 39012508 39012727 -46425753 + MIR SINE MIR 7 262 0 322 323 10 0 chr17 39012747 39012843 -46425637 - MIR SINE MIR -68 140 44 1831 113 74 28 chr17 39012926 39013209 -46425271 - AluJb SINE Alu -16 296 1 1727 154 0 33 chr17 39014282 39014625 -46423855 + AluJo SINE Alu 1 312 0 2133 146 0 9 chr17 39014826 39015141 -46423339 - AluJb SINE Alu 0 312 1 273 57 0 0 chr17 39015359 39015394 -46423086 + (TG)n Simple_repeat Simple_repeat 2 36 0 185 0 40 0 chr17 39015542 39015567 -46422913 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 725 159 0 0 chr17 39015567 39015680 -46422800 - FLAM_C SINE Alu -22 121 9 1718 180 7 3 chr17 39016684 39016979 -46421501 - AluJo SINE Alu -15 297 2 2150 108 35 0 chr17 39017144 39017431 -46421049 + AluSx SINE Alu 1 297 -15 297 0 0 0 chr17 39017444 39017477 -46421003 + (CA)n Simple_repeat Simple_repeat 2 34 0 202 157 20 20 chr17 39017508 39017559 -46420921 + GA-rich Low_complexity Low_complexity 2 52 0 2214 103 0 10 chr17 39017761 39018061 -46420419 + AluSx SINE Alu 1 297 -15 312 172 0 0 chr17 39018108 39018166 -46420314 + GA-rich Low_complexity Low_complexity 3 60 0 780 231 125 5 chr17 39018188 39018396 -46420084 - LTR16A LTR ERVL -11 439 207 1663 164 22 32 chr17 39018598 39018910 -46419570 + AluJo SINE Alu 4 312 0 686 288 17 29 chr17 39018932 39019172 -46419308 - L2 LINE L2 -246 3067 2831 415 233 68 10 chr17 39019233 39019336 -46419144 + L2 LINE L2 3164 3272 0 394 204 18 0 chr17 39019348 39019461 -46419019 + (TGGA)n Simple_repeat Simple_repeat 4 118 0 354 331 80 0 chr17 39019781 39019932 -46418548 - MIR3 SINE MIR -1 207 45 1630 181 17 10 chr17 39020032 39020324 -46418156 - AluJb SINE Alu -13 299 6 2425 84 0 0 chr17 39020409 39020705 -46417775 - AluSg SINE Alu -14 296 1 2266 102 7 20 chr17 39020705 39021008 -46417472 - AluSq SINE Alu -14 299 1 907 154 0 7 chr17 39021008 39021144 -46417336 - AluJo SINE Alu -177 135 1 2391 55 41 3 chr17 39021859 39022151 -46416329 - AluY SINE Alu -8 303 1 208 308 154 10 chr17 39022194 39022298 -46416182 + L3b LINE CR1 1354 1472 -111 651 297 177 6 chr17 39022298 39022711 -46415769 + L3 LINE CR1 988 1533 -44 307 343 10 0 chr17 39023664 39023763 -46414717 - L3 LINE CR1 -82 1495 1396 764 153 0 36 chr17 39024637 39024774 -46413706 - FLAM_A SINE Alu -1 132 1 2048 117 19 29 chr17 39024796 39025103 -46413377 - AluSx SINE Alu -8 304 1 2272 148 2 84 chr17 39025860 39026163 -46412317 - L1MB8 LINE L1 -42 6136 5810 1819 138 44 4 chr17 39026163 39026438 -46412042 + AluJo SINE Alu 1 286 -26 333 0 0 0 chr17 39026439 39026476 -46412004 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2272 148 2 84 chr17 39026476 39026713 -46411767 - L1MB8 LINE L1 -367 5811 5546 2041 141 3 13 chr17 39026823 39027135 -46411345 - AluJb SINE Alu -3 309 1 2095 108 22 0 chr17 39027683 39027988 -46410492 + AluSx SINE Alu 1 311 0 1519 195 13 44 chr17 39028005 39028148 -46410332 + AluJb SINE Alu 1 147 -165 2389 104 3 3 chr17 39028148 39028456 -46410024 + AluSx SINE Alu 1 308 -4 1519 195 13 44 chr17 39028456 39028630 -46409850 + AluJb SINE Alu 147 308 -4 213 292 31 15 chr17 39028754 39028819 -46409661 - MIR SINE MIR -64 144 79 2102 120 48 0 chr17 39029382 39029673 -46408807 + AluSx SINE Alu 1 305 -7 1873 133 7 41 chr17 39030434 39030728 -46407752 - AluJo SINE Alu -28 284 1 294 0 0 26 chr17 39031388 39031426 -46407054 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2329 92 0 0 chr17 39031426 39031709 -46406771 - AluSx SINE Alu -29 283 1 242 28 0 28 chr17 39031990 39032026 -46406454 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 630 268 50 29 chr17 39032734 39032973 -46405507 - L1ME LINE L1 -322 5799 5556 1002 168 0 22 chr17 39033454 39033633 -46404847 - AluJb SINE Alu -1 311 137 2301 105 0 0 chr17 39033633 39033927 -46404553 - AluSx SINE Alu -18 294 1 1501 132 4 13 chr17 39033969 39034197 -46404283 + AluSg/x SINE Alu 75 300 -10 2670 49 0 0 chr17 39034199 39034503 -46403977 + AluY SINE Alu 2 305 -6 482 236 33 61 chr17 39034504 39034716 -46403764 - L1MC4 LINE L1 -50 7992 7787 434 123 0 86 chr17 39034946 39035027 -46403453 + AluJ/FRAM SINE Alu 224 297 -15 2399 143 121 36 chr17 39035084 39035391 -46403089 - LTR64 LTR ERVK -12 546 178 1588 144 0 9 chr17 39035391 39035620 -46402860 - AluJb SINE Alu -1 311 85 2399 143 121 36 chr17 39035620 39035815 -46402665 - LTR64 LTR ERVK -380 178 1 1404 131 0 0 chr17 39035838 39036029 -46402451 + AluY SINE Alu 1 191 -120 2232 102 3 47 chr17 39036384 39036706 -46401774 + AluSx SINE Alu 4 311 -1 21 0 0 0 chr17 39036936 39036957 -46401523 + AT_rich Low_complexity Low_complexity 1 21 0 871 0 0 0 chr17 39037064 39037157 -46401323 + HY4 scRNA scRNA 1 93 0 2167 111 0 7 chr17 39037211 39037509 -46400971 - AluY SINE Alu -15 296 1 930 198 6 17 chr17 39037736 39037908 -46400572 - AluJo SINE Alu -11 301 132 323 244 156 11 chr17 39037928 39038018 -46400462 + HAL1b LINE L1 964 1066 -282 2235 125 3 0 chr17 39038080 39038385 -46400095 - AluSq SINE Alu -7 306 1 549 140 252 9 chr17 39038439 39038546 -46399934 - AluJo SINE Alu -178 134 2 1477 105 0 19 chr17 39038575 39038784 -46399696 - AluSg/x SINE Alu -23 289 85 2758 42 0 0 chr17 39038792 39039103 -46399377 - AluY SINE Alu 0 311 1 1409 129 9 21 chr17 39039103 39039336 -46399144 - AluSq SINE Alu -3 310 81 658 153 0 10 chr17 39039443 39039541 -46398939 - AluJ/FLAM SINE Alu -213 99 3 669 302 114 31 chr17 39039548 39039777 -46398703 + L2 LINE L2 2359 2568 -746 2100 107 55 0 chr17 39039777 39040068 -46398412 - AluSq SINE Alu -6 307 1 669 302 114 31 chr17 39040068 39040225 -46398255 + L2 LINE L2 2568 2777 -537 750 178 0 8 chr17 39040243 39040361 -46398119 + FLAM_C SINE Alu 2 118 -25 2225 140 0 6 chr17 39040380 39040694 -46397786 - AluSx SINE Alu 0 312 1 2386 158 18 5 chr17 39040785 39041227 -46397253 + L1MB7 LINE L1 5679 6126 -58 1878 189 7 0 chr17 39041238 39041544 -46396936 - AluJo SINE Alu -4 308 1 2314 117 0 0 chr17 39041554 39041861 -46396619 - AluSq SINE Alu -2 311 5 2259 123 10 3 chr17 39041877 39042187 -46396293 - AluSx SINE Alu 0 312 1 359 118 0 27 chr17 39042187 39042260 -46396220 + L1MB7 LINE L1 6110 6178 0 419 272 129 84 chr17 39042264 39042746 -46395734 + L2 LINE L2 2778 3272 0 314 262 196 65 chr17 39043277 39043527 -46394953 - L1MC4 LINE L1 -996 7046 6830 2293 115 3 3 chr17 39043527 39043839 -46394641 + AluSx SINE Alu 1 312 0 314 262 196 65 chr17 39043839 39043850 -46394630 - L1MC4 LINE L1 -1212 6830 6822 2052 118 47 3 chr17 39043850 39044147 -46394333 + AluSg SINE Alu 1 310 0 314 262 196 65 chr17 39044147 39044233 -46394247 - L1MC4 LINE L1 -1220 6822 6563 21 36 0 0 chr17 39044246 39044274 -46394206 + AT_rich Low_complexity Low_complexity 1 28 0 741 171 23 0 chr17 39044276 39044405 -46394075 + FLAM_C SINE Alu 1 132 -1 466 193 0 0 chr17 39044834 39044917 -46393563 - FLAM_A SINE Alu -16 126 44 6439 40 12 7 chr17 39045124 39045872 -46392608 + SVA Other Other 635 1386 0 26 0 0 0 chr17 39045872 39045898 -46392582 + AT_rich Low_complexity Low_complexity 1 26 0 2199 123 3 10 chr17 39045935 39046243 -46392237 + AluSq SINE Alu 1 306 -7 421 314 80 73 chr17 39046324 39046350 -46392130 - L2 LINE L2 0 3272 3248 2194 139 0 0 chr17 39046350 39046651 -46391829 + AluSx SINE Alu 1 301 -11 421 314 80 73 chr17 39046651 39046712 -46391768 - L2 LINE L2 -24 3248 3189 1877 181 0 3 chr17 39046712 39047016 -46391464 + AluJb SINE Alu 1 303 -9 421 314 80 73 chr17 39047016 39047354 -46391126 - L2 LINE L2 -83 3189 2843 2191 132 0 0 chr17 39047530 39047834 -46390646 - AluSg SINE Alu -6 304 1 2002 134 20 3 chr17 39047839 39048137 -46390343 - AluSx SINE Alu -9 303 1 233 209 60 0 chr17 39048141 39048208 -46390272 - Charlie8 DNA MER1_type -2258 159 89 420 271 109 16 chr17 39048311 39048503 -46389977 + MIR SINE MIR 53 262 0 2261 107 7 0 chr17 39048612 39048902 -46389578 + AluSx SINE Alu 1 292 -20 2340 108 0 3 chr17 39050178 39050485 -46387995 - AluSx SINE Alu -6 306 1 2572 47 0 3 chr17 39050543 39050839 -46387641 - AluY SINE Alu -16 295 1 1261 135 33 49 chr17 39052078 39052323 -46386157 - L1MB8 LINE L1 -5 6173 5933 261 152 0 22 chr17 39052593 39052639 -46385841 + L2 LINE L2 3268 3312 -1 311 341 89 7 chr17 39052645 39052780 -46385700 - MIR SINE MIR -115 147 2 1926 150 0 20 chr17 39052837 39053143 -46385337 + AluSx SINE Alu 1 300 -12 1803 181 7 0 chr17 39053788 39054075 -46384405 - AluJo SINE Alu -23 289 1 2286 121 0 0 chr17 39054220 39054517 -46383963 + AluSx SINE Alu 1 297 -15 2228 102 3 0 chr17 39054722 39055029 -46383451 + AluSp SINE Alu 1 308 0 2512 47 7 13 chr17 39055975 39056275 -46382205 + AluY SINE Alu 1 298 -13 1403 173 0 13 chr17 39056359 39056584 -46381896 + AluJb SINE Alu 3 224 -88 826 200 30 24 chr17 39056615 39056780 -46381700 + FRAM SINE Alu 1 166 0 216 209 0 0 chr17 39057141 39057184 -46381296 + A-rich Low_complexity Low_complexity 1 43 0 379 338 120 32 chr17 39057346 39057562 -46380918 + L2 LINE L2 3031 3265 -7 2215 112 30 0 chr17 39057588 39057891 -46380589 + AluSx SINE Alu 1 312 0 1899 126 8 0 chr17 39058231 39058492 -46379988 + AluSx SINE Alu 38 300 -12 1557 167 4 25 chr17 39058497 39058773 -46379707 + AluJo SINE Alu 1 270 -42 2270 90 0 45 chr17 39058789 39059099 -46379381 + AluSg SINE Alu 1 296 -14 2015 147 20 0 chr17 39059101 39059407 -46379073 + AluJb SINE Alu 1 312 0 906 152 6 32 chr17 39060148 39060306 -46378174 - MER5A DNA MER1_type -34 155 2 2387 71 0 3 chr17 39060741 39061037 -46377443 + AluY SINE Alu 1 295 -16 2329 112 3 0 chr17 39061044 39061348 -46377132 + AluSx SINE Alu 2 306 -6 776 189 81 0 chr17 39061393 39061541 -46376939 + FAM SINE Alu 1 48 -1 2322 105 0 0 chr17 39061562 39061857 -46376623 + AluSx SINE Alu 1 295 -17 1535 140 18 113 chr17 39061866 39062195 -46376285 + AluJb SINE Alu 1 298 -14 466 313 69 28 chr17 39062419 39062636 -46375844 + MIR SINE MIR 18 243 -19 618 312 93 0 chr17 39062647 39062852 -46375628 + MIR SINE MIR 15 238 -24 658 71 0 0 chr17 39062968 39063052 -46375428 - HY4 scRNA scRNA -9 84 1 1016 117 93 0 chr17 39064198 39064360 -46374120 - AluJb SINE Alu -1 311 135 261 319 0 0 chr17 39064676 39064745 -46373735 + MIR SINE MIR 191 259 -3 210 37 0 0 chr17 39065514 39065541 -46372939 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 471 63 380 0 chr17 39065548 39065627 -46372853 - AluYa5 SINE Alu -48 263 155 694 140 0 0 chr17 39065727 39065827 -46372653 + AluSp/q SINE Alu 189 288 -25 709 136 0 0 chr17 39065835 39065938 -46372542 + AluY SINE Alu 2 104 -207 316 115 0 19 chr17 39065938 39065990 -46372490 + AluSp/q SINE Alu 205 255 -48 2165 134 0 3 chr17 39066115 39066421 -46372059 + AluSx SINE Alu 1 305 -7 2206 80 7 11 chr17 39066588 39066875 -46371605 + AluY SINE Alu 1 286 -25 2331 88 0 7 chr17 39067002 39067297 -46371183 + AluY SINE Alu 1 293 -18 2000 101 49 14 chr17 39067811 39068099 -46370381 + AluSc SINE Alu 1 298 -11 542 213 158 49 chr17 39068334 39068498 -46369982 - MER5A DNA MER1_type -6 183 2 2479 60 3 3 chr17 39068917 39069215 -46369265 - AluY SINE Alu -13 298 1 1886 143 7 27 chr17 39069217 39069511 -46368969 - AluSg SINE Alu -22 288 1 620 226 124 0 chr17 39069693 39069870 -46368610 + MIR SINE MIR 44 242 -20 2423 83 7 0 chr17 39069901 39070202 -46368278 - AluSx SINE Alu -9 303 1 772 145 73 0 chr17 39070203 39070327 -46368153 - FLAM_A SINE Alu 0 142 10 371 156 0 0 chr17 39070354 39070418 -46368062 - AluS SINE Alu -5 296 233 847 87 118 8 chr17 39070420 39070547 -46367933 - AluYb8 SINE Alu -176 142 2 2104 125 0 7 chr17 39070610 39070906 -46367574 - AluSq SINE Alu -18 295 2 2170 115 3 7 chr17 39070969 39071274 -46367206 - AluSq SINE Alu -9 304 1 264 263 38 25 chr17 39071274 39071354 -46367126 - L2 LINE L2 -7 3306 3226 301 89 0 0 chr17 39072044 39072089 -46366391 + Alu SINE Alu 1 45 -257 1579 108 5 5 chr17 39072089 39072302 -46366178 + AluSg/x SINE Alu 88 300 -12 1992 130 7 14 chr17 39072319 39072603 -46365877 + AluSx SINE Alu 1 282 -30 396 0 0 0 chr17 39072629 39072673 -46365807 + (TA)n Simple_repeat Simple_repeat 1 44 0 2235 118 0 0 chr17 39072835 39073132 -46365348 - AluY SINE Alu -12 299 3 834 164 0 0 chr17 39073135 39073263 -46365217 - AluSp/q SINE Alu 0 313 186 517 183 33 33 chr17 39073369 39073489 -46364991 + FRAM SINE Alu 40 159 -17 1826 71 0 0 chr17 39073492 39073718 -46364762 + AluY SINE Alu 86 311 0 2333 107 0 0 chr17 39074054 39074354 -46364126 + AluSc SINE Alu 1 300 -9 22 0 0 0 chr17 39074428 39074450 -46364030 + AT_rich Low_complexity Low_complexity 1 22 0 1712 156 3 28 chr17 39075239 39075522 -46362958 - AluJo SINE Alu -23 289 14 835 158 8 0 chr17 39075525 39075652 -46362828 - FLAM_A SINE Alu -5 128 1 2223 110 23 0 chr17 39076089 39076389 -46362091 - AluSx SINE Alu -5 307 1 345 280 0 0 chr17 39076488 39076563 -46361917 - HAL1 LINE L1 -731 1776 1702 510 100 0 14 chr17 39076727 39076797 -46361683 - Alu SINE Alu -248 70 2 2019 103 92 0 chr17 39076948 39077229 -46361251 - AluSq SINE Alu -6 307 1 481 197 143 41 chr17 39077405 39077552 -46360928 - L2 LINE L2 -9 3304 3143 1933 131 10 7 chr17 39077552 39077842 -46360638 - AluSx SINE Alu -21 291 1 551 181 17 17 chr17 39077971 39078087 -46360393 + AluJb SINE Alu 190 305 -7 368 158 0 37 chr17 39078121 39078203 -46360277 - L1MA8 LINE L1 -234 6057 5979 2135 96 3 20 chr17 39078764 39079085 -46359395 - AluSp SINE Alu 0 313 1 190 246 70 0 chr17 39079595 39079652 -46358828 - MIR3 SINE MIR -38 170 110 1495 171 96 43 chr17 39079841 39079996 -46358484 + MLT1A1 LTR MaLR 3 148 -217 2473 81 0 16 chr17 39079996 39080306 -46358174 + AluSq SINE Alu 1 305 -8 1495 171 96 43 chr17 39080306 39080495 -46357985 + MLT1A1 LTR MaLR 148 365 0 269 215 31 0 chr17 39080698 39080763 -46357717 + L1MC4a LINE L1 5875 5941 -1867 1822 184 7 3 chr17 39080820 39081119 -46357361 + AluJb SINE Alu 1 300 -12 2387 82 3 0 chr17 39081119 39081412 -46357068 + AluSq SINE Alu 1 294 -19 1027 157 0 7 chr17 39081474 39081627 -46356853 + AluSg/x SINE Alu 145 296 -16 573 225 162 9 chr17 39081847 39082069 -46356411 - L1M4 LINE L1 -3531 2615 2360 445 167 0 0 chr17 39082069 39082135 -46356345 + MER75 DNA T2_type 1 66 -448 2245 101 3 0 chr17 39082214 39082522 -46355958 + AluSc SINE Alu 1 309 0 943 154 7 0 chr17 39082522 39082671 -46355809 + AluSg/x SINE Alu 132 281 -29 242 273 108 22 chr17 39083261 39083297 -46355183 + L1MC/D LINE L1 5631 5662 -2146 2110 111 3 0 chr17 39083297 39083586 -46354894 + AluSq SINE Alu 1 290 -23 242 273 108 22 chr17 39083586 39083688 -46354792 + L1MC/D LINE L1 5662 5781 -2027 1648 138 17 37 chr17 39083709 39084007 -46354473 + AluSx SINE Alu 20 311 -1 205 300 81 69 chr17 39084608 39084855 -46353625 + L2 LINE L2 2939 3188 -84 997 161 0 12 chr17 39084928 39085123 -46353357 + AluJo SINE Alu 123 315 0 1094 102 48 6 chr17 39085235 39085401 -46353079 - AluSq SINE Alu -7 306 134 1494 127 4 4 chr17 39085401 39085629 -46352851 - AluSg/x SINE Alu -13 299 72 2379 72 0 10 chr17 39086432 39086738 -46351742 - AluY SINE Alu -8 303 1 335 146 85 24 chr17 39087576 39087658 -46350822 + L1 LINE L1 4019 4105 -2041 2729 13 0 0 chr17 39087658 39087964 -46350516 - AluY SINE Alu -5 306 1 595 181 53 23 chr17 39087964 39088097 -46350383 - AluJb SINE Alu -12 300 164 353 327 79 18 chr17 39088304 39088469 -46350011 - MIR SINE MIR -34 228 54 835 96 96 0 chr17 39088470 39088605 -46349875 - AluSg/x SINE Alu -1 311 164 332 303 95 39 chr17 39088710 39089010 -46349470 - L1MCa LINE L1 -1548 4878 1820 652 133 97 0 chr17 39089020 39089133 -46349347 - FLAM_C SINE Alu -18 125 2 888 280 45 55 chr17 39089313 39089510 -46348970 - L1MC4a LINE L1 -1883 5925 5728 2215 95 0 0 chr17 39089510 39089804 -46348676 - AluSq SINE Alu -18 295 2 888 280 45 55 chr17 39089804 39090028 -46348452 - L1MC4a LINE L1 -2080 5728 5508 1970 133 0 37 chr17 39090080 39090404 -46348076 - AluSx SINE Alu 0 312 1 1406 101 0 19 chr17 39090432 39090641 -46347839 - AluSg/x SINE Alu -23 287 83 2171 120 0 0 chr17 39090893 39091192 -46347288 + AluSx SINE Alu 1 299 -13 1745 151 25 0 chr17 39092044 39092329 -46346151 - AluJb SINE Alu -9 303 12 1545 91 5 0 chr17 39092436 39092645 -46345835 + AluSg/x SINE Alu 83 292 -18 702 342 42 27 chr17 39092649 39092825 -46345655 - L2 LINE L2 -624 2690 2518 2068 97 35 0 chr17 39092825 39093113 -46345367 + AluSx SINE Alu 12 309 -3 702 342 42 27 chr17 39093113 39093340 -46345140 - L2 LINE L2 -796 2518 2281 1439 159 104 11 chr17 39094113 39094383 -46344097 + AluJo SINE Alu 1 295 -17 2127 111 3 3 chr17 39094384 39094681 -46343799 + AluSc SINE Alu 1 297 -12 283 311 75 94 chr17 39094682 39094949 -46343531 - L2 LINE L2 -1 3271 3010 1636 164 37 3 chr17 39095114 39095412 -46343068 + AluJo SINE Alu 1 308 -4 1137 123 6 0 chr17 39095448 39095618 -46342862 - AluSg/x SINE Alu -15 295 125 303 261 27 101 chr17 39095946 39096134 -46342346 + L2 LINE L2 2892 3065 -248 211 321 37 0 chr17 39096217 39096298 -46342182 + L2 LINE L2 3226 3309 -4 186 133 0 0 chr17 39096593 39096623 -46341857 + (CCCTAG)n Simple_repeat Simple_repeat 5 34 0 2429 55 3 6 chr17 39097163 39097475 -46341005 + AluSx SINE Alu 1 311 -1 2405 39 0 0 chr17 39097475 39097758 -46340722 + AluY SINE Alu 1 283 -28 2076 94 4 0 chr17 39097916 39098193 -46340287 + AluSq SINE Alu 1 278 -35 399 41 0 0 chr17 39098741 39098790 -46339690 + (CA)n Simple_repeat Simple_repeat 2 50 0 1794 133 39 14 chr17 39098792 39099077 -46339403 + AluSx SINE Alu 1 292 -20 1653 140 19 8 chr17 39099088 39099352 -46339128 + AluSx SINE Alu 1 267 -45 198 0 0 0 chr17 39099356 39099378 -46339102 + (CA)n Simple_repeat Simple_repeat 1 22 0 2327 92 0 0 chr17 39099979 39100285 -46338195 + AluSg SINE Alu 1 306 -4 5508 73 33 56 chr17 39100370 39101257 -46337223 + SVA Other Other 1 866 -520 237 376 26 17 chr17 39101431 39101548 -46336932 - L2 LINE L2 -535 2779 2662 2239 104 0 16 chr17 39101694 39101831 -46336649 + AluSp SINE Alu 1 139 -174 2295 103 0 0 chr17 39101831 39102141 -46336339 + AluSx SINE Alu 3 312 0 2239 104 0 16 chr17 39102141 39102321 -46336159 + AluSp SINE Alu 139 313 0 364 114 0 29 chr17 39102340 39102410 -46336070 + (GAAA)n Simple_repeat Simple_repeat 4 71 0 2200 98 7 0 chr17 39102483 39102789 -46335691 + AluSq SINE Alu 1 308 -5 1983 134 0 3 chr17 39102814 39103121 -46335359 + AluSx SINE Alu 1 306 -6 1030 128 26 0 chr17 39103250 39103406 -46335074 + L1PA8 LINE L1 6006 6165 -7 2342 83 3 0 chr17 39103408 39103720 -46334760 + AluSp SINE Alu 1 313 0 262 298 18 44 chr17 39105016 39105130 -46333350 + L2 LINE L2 3202 3312 -1 729 94 86 26 chr17 39106338 39106455 -46332025 - FLAM_A SINE Alu -13 129 6 1786 162 0 3 chr17 39106675 39106972 -46331508 - AluJb SINE Alu -12 300 5 1946 116 0 20 chr17 39107222 39107347 -46331133 + AluSx SINE Alu 12 138 -174 2289 64 0 0 chr17 39107347 39107657 -46330823 + AluSc SINE Alu 1 310 0 1946 116 0 20 chr17 39107657 39107823 -46330657 + AluSx SINE Alu 138 298 -14 2304 73 3 3 chr17 39107828 39108130 -46330350 + AluY SINE Alu 1 302 -9 825 185 83 0 chr17 39108130 39108287 -46330193 + AluJb SINE Alu 135 304 -8 234 281 0 0 chr17 39108326 39108383 -46330097 + Charlie8 DNA MER1_type 220 276 -2141 291 348 0 0 chr17 39108625 39108714 -46329766 - L2 LINE L2 0 3272 3184 758 228 118 50 chr17 39108955 39109111 -46329369 + MIR SINE MIR 1 146 -116 2072 116 0 0 chr17 39109111 39109437 -46329043 + AluSx SINE Alu 1 326 0 758 228 118 50 chr17 39109437 39109558 -46328922 + MIR SINE MIR 146 257 -5 209 231 0 62 chr17 39109730 39109795 -46328685 + L2 LINE L2 3203 3263 -9 994 105 0 7 chr17 39110197 39110333 -46328147 + AluSq/x SINE Alu 1 137 -175 2055 108 24 0 chr17 39110333 39110630 -46327850 + AluSx SINE Alu 1 304 -8 220 227 0 15 chr17 39110641 39110707 -46327773 + MIR SINE MIR 48 112 -150 1464 142 27 112 chr17 39114610 39114757 -46323723 + AluYb8 SINE Alu 1 104 -214 2310 86 3 3 chr17 39114757 39115070 -46323410 + AluSp SINE Alu 1 313 0 1464 142 27 112 chr17 39115070 39115260 -46323220 + AluYb8 SINE Alu 104 309 -9 892 154 26 0 chr17 39115260 39115416 -46323064 + AluSq SINE Alu 137 296 -17 316 143 0 0 chr17 39115440 39115496 -46322984 - AluJb SINE Alu -2 300 245 960 158 7 0 chr17 39115496 39115648 -46322832 - AluJb SINE Alu -159 153 1 2263 95 3 0 chr17 39115773 39116078 -46322402 + AluSq SINE Alu 1 306 -7 480 298 8 0 chr17 39117428 39117559 -46320921 - MIR SINE MIR 0 262 131 287 323 121 35 chr17 39117638 39117836 -46320644 + MIR SINE MIR 40 254 -8 191 36 36 0 chr17 39117837 39117865 -46320615 + (TAA)n Simple_repeat Simple_repeat 1 29 0 2397 80 0 3 chr17 39119063 39119377 -46319103 + AluSp SINE Alu 1 313 0 22 56 0 0 chr17 39120562 39120598 -46317882 + GC_rich Low_complexity Low_complexity 1 36 0 182 118 29 0 chr17 39120649 39120683 -46317797 + (CGG)n Simple_repeat Simple_repeat 3 37 0 21 36 0 0 chr17 39120894 39120922 -46317558 + GC_rich Low_complexity Low_complexity 1 28 0 2171 79 27 3 chr17 39121077 39121369 -46317111 + AluSx SINE Alu 1 299 -13 2034 104 3 14 chr17 39121370 39121667 -46316813 + AluSx SINE Alu 1 294 -18 2348 48 20 3 chr17 39121667 39121960 -46316520 + AluY SINE Alu 1 298 -13 1014 169 11 0 chr17 39122238 39122416 -46316064 - AluJo SINE Alu -11 301 122 365 120 0 0 chr17 39122416 39122466 -46316014 - MER66A LTR ERV1 -141 337 288 812 140 49 21 chr17 39122466 39122609 -46315871 - AluJo SINE Alu -165 147 1 1481 80 175 16 chr17 39122679 39122930 -46315550 - AluSc SINE Alu -18 291 1 340 286 6 23 chr17 39123607 39123782 -46314698 + G-rich Low_complexity Low_complexity 6 177 0 22 0 0 0 chr17 39124253 39124275 -46314205 + GC_rich Low_complexity Low_complexity 1 22 0 2184 99 7 3 chr17 39124830 39125134 -46313346 + AluSx SINE Alu 1 305 -7 2375 63 3 31 chr17 39128076 39128394 -46310086 + AluY SINE Alu 1 309 -2 441 286 180 59 chr17 39128856 39129383 -46309097 - L2 LINE L2 0 3272 2675 861 156 0 67 chr17 39129434 39129614 -46308866 + FRAM SINE Alu 8 175 -1 2314 75 0 35 chr17 39130524 39130709 -46307771 - AluSc SINE Alu -2 307 136 2206 84 7 3 chr17 39130709 39131005 -46307475 - AluSp SINE Alu -16 297 1 2314 75 0 35 chr17 39131005 39131137 -46307343 - AluSc SINE Alu -173 136 1 1129 59 0 0 chr17 39131137 39131271 -46307209 - AluSq/x SINE Alu -177 136 3 2059 83 14 17 chr17 39131279 39131434 -46307046 - AluY SINE Alu -20 291 136 2532 47 0 0 chr17 39131434 39131734 -46306746 - AluY SINE Alu -11 300 1 2059 83 14 17 chr17 39131734 39131868 -46306612 - AluY SINE Alu -175 136 3 331 327 49 2 chr17 39132021 39132183 -46306297 + MIR SINE MIR 17 176 -56 217 206 41 27 chr17 39132230 39132303 -46306177 - L2 LINE L2 -194 3078 3005 452 32 0 0 chr17 39132411 39132473 -46306007 + SVA Other Other 1322 1383 -3 480 318 49 15 chr17 39133496 39133701 -46304779 + MIR SINE MIR 34 252 -10 1637 176 16 23 chr17 39134000 39134307 -46304173 + AluJo SINE Alu 1 305 -7 1414 150 105 11 chr17 39134314 39134580 -46303900 + AluJb SINE Alu 1 291 -21 352 253 65 21 chr17 39134580 39134718 -46303762 + MIR3 SINE MIR 35 178 -30 710 96 10 0 chr17 39135169 39135273 -46303207 - L1MB5 LINE L1 0 6174 6070 2452 56 3 0 chr17 39135300 39135604 -46302876 - AluY SINE Alu -6 305 1 1979 107 38 3 chr17 39135837 39136126 -46302354 - AluSq SINE Alu -14 299 1 381 22 0 0 chr17 39136585 39136631 -46301849 + (CA)n Simple_repeat Simple_repeat 2 47 0 288 232 152 40 chr17 39136808 39136907 -46301573 + MIR SINE MIR 44 153 -55 2135 113 3 3 chr17 39137155 39137466 -46301014 + AluSq SINE Alu 1 311 -2 217 219 0 0 chr17 39138451 39138492 -46299988 + (CA)n Simple_repeat Simple_repeat 2 42 0 2349 79 0 0 chr17 39138540 39138845 -46299635 - AluY SINE Alu -6 305 1 477 294 25 25 chr17 39138887 39139047 -46299433 + MIR SINE MIR 2 161 -101 1572 149 84 28 chr17 39139575 39139896 -46298584 - MER44D DNA MER2_type 0 609 1 428 170 252 63 chr17 39140074 39140233 -46298247 - MER5A DNA MER1_type 0 189 1 186 316 72 72 chr17 39141756 39141895 -46296585 + MIR SINE MIR 49 187 -75 1519 237 141 41 chr17 39142089 39142579 -46295901 + MLT1E2 LTR MaLR 2 540 -86 399 195 0 24 chr17 39142620 39142702 -46295778 - MIR SINE MIR -73 189 110 2082 119 7 0 chr17 39143258 39143560 -46294920 - AluSx SINE Alu -6 306 3 2201 96 3 3 chr17 39144381 39144682 -46293798 - AluSx SINE Alu -11 301 1 1322 91 0 0 chr17 39144682 39144857 -46293623 - AluSq SINE Alu -5 308 134 1648 128 0 16 chr17 39144857 39145108 -46293372 - AluSx SINE Alu -12 300 54 819 97 0 32 chr17 39145109 39145233 -46293247 + AluSc SINE Alu 176 295 -14 232 240 274 0 chr17 39145377 39145552 -46292928 + L1ME4a LINE L1 5837 6059 -62 1690 164 7 10 chr17 39145561 39145860 -46292620 - AluJo SINE Alu -14 298 1 227 184 158 66 chr17 39145979 39146055 -46292425 - L2 LINE L2 -3 3269 3187 712 207 24 35 chr17 39146203 39146231 -46292249 - AluJo SINE Alu -144 168 141 1632 143 79 7 chr17 39146231 39146511 -46291969 - AluJb SINE Alu -12 300 1 712 207 24 35 chr17 39146511 39146651 -46291829 - AluJo SINE Alu -171 141 2 2213 81 0 16 chr17 39146657 39146964 -46291516 - AluSc SINE Alu -7 302 1 1876 143 10 19 chr17 39146964 39147277 -46291203 - AluSx SINE Alu -1 311 1 200 176 0 0 chr17 39147992 39148026 -46290454 + CT-rich Low_complexity Low_complexity 2 35 0 2110 101 13 16 chr17 39148786 39149093 -46289387 + AluY SINE Alu 1 306 -5 2355 74 0 0 chr17 39150098 39150394 -46288086 - AluSg SINE Alu -14 296 1 656 234 29 0 chr17 39150600 39150737 -46287743 + MER3 DNA MER1_type 1 141 -68 1068 157 0 17 chr17 39150738 39150910 -46287570 - FRAM SINE Alu -13 163 1 326 167 0 0 chr17 39150914 39150968 -46287512 + MER3 DNA MER1_type 155 208 -1 450 0 0 0 chr17 39151240 39151290 -46287190 + (CA)n Simple_repeat Simple_repeat 2 51 0 1950 88 0 4 chr17 39151342 39151603 -46286877 - AluSg SINE Alu -14 296 37 2164 90 0 17 chr17 39151844 39152145 -46286335 + AluY SINE Alu 1 296 -15 2121 102 24 0 chr17 39152157 39152452 -46286028 + AluSp SINE Alu 1 302 -11 1812 165 0 3 chr17 39152907 39153204 -46285276 - AluJb SINE Alu -16 296 1 2162 88 3 23 chr17 39153208 39153513 -46284967 - AluSq SINE Alu -14 299 1 1596 164 0 58 chr17 39153829 39153966 -46284514 + AluSx SINE Alu 1 144 -168 1751 149 0 4 chr17 39153966 39154241 -46284239 + AluSx SINE Alu 1 274 -38 1596 164 0 58 chr17 39154241 39154413 -46284067 + AluSx SINE Alu 144 292 -20 937 246 12 48 chr17 39154419 39154638 -46283842 + MIR SINE MIR 20 230 -32 1605 168 16 20 chr17 39154638 39154942 -46283538 - AluJb SINE Alu -9 303 1 937 246 12 48 chr17 39154942 39154974 -46283506 + MIR SINE MIR 230 262 0 631 177 33 116 chr17 39154975 39155156 -46283324 + FRAM SINE Alu 1 166 0 347 313 69 77 chr17 39155201 39155434 -46283046 + MIR SINE MIR 20 250 -12 2099 102 0 37 chr17 39155691 39156014 -46282466 + AluSx SINE Alu 1 311 -1 2308 45 0 10 chr17 39156017 39156334 -46282146 + AluY SINE Alu 1 311 0 1237 120 0 0 chr17 39156334 39156509 -46281971 + AluSg/x SINE Alu 134 308 -4 1369 185 3 46 chr17 39156541 39156844 -46281636 + AluJo SINE Alu 1 290 -22 460 238 85 121 chr17 39157529 39157645 -46280835 + L2 LINE L2 2226 2345 -969 1923 108 3 31 chr17 39157645 39157933 -46280547 + AluSx SINE Alu 1 280 -32 414 0 0 0 chr17 39157933 39157979 -46280501 + (CAA)n Simple_repeat Simple_repeat 3 48 0 460 238 85 121 chr17 39157979 39158226 -46280254 + L2 LINE L2 2343 2577 -737 1936 101 0 47 chr17 39158362 39158536 -46279944 - AluSx SINE Alu 0 307 152 1711 100 119 11 chr17 39158536 39158805 -46279675 - AluSp SINE Alu -15 298 1 1936 101 0 47 chr17 39158805 39158948 -46279532 - AluSx SINE Alu -155 152 4 1799 125 3 56 chr17 39158966 39159270 -46279210 - AluSx SINE Alu -24 288 1 1932 142 6 6 chr17 39159307 39159618 -46278862 + AluSx SINE Alu 1 311 -1 634 316 135 28 chr17 39159619 39159974 -46278506 + L2 LINE L2 2916 3308 -5 2144 110 0 7 chr17 39160049 39160348 -46278132 - AluSx SINE Alu -15 297 1 220 291 0 0 chr17 39160506 39160561 -46277919 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 1514 187 20 20 chr17 39160562 39160856 -46277624 - AluJo SINE Alu -16 296 3 1979 124 7 0 chr17 39161066 39161357 -46277123 - AluSx SINE Alu -16 296 4 2079 104 10 0 chr17 39161358 39161647 -46276833 - AluSp SINE Alu -15 298 7 189 0 0 0 chr17 39163103 39163124 -46275356 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2265 86 0 0 chr17 39163291 39163592 -46274888 - AluY SINE Alu -9 302 2 2025 107 16 16 chr17 39163850 39164158 -46274322 + AluSp SINE Alu 1 308 -5 846 240 111 98 chr17 39164198 39164677 -46273803 - L3 LINE CR1 -188 1389 905 2000 129 3 0 chr17 39164870 39165172 -46273308 - AluSg SINE Alu -7 303 1 2313 79 3 3 chr17 39165276 39165581 -46272899 - AluSq SINE Alu -8 305 1 2212 89 0 16 chr17 39165703 39166017 -46272463 - AluSc SINE Alu 0 309 1 413 123 27 41 chr17 39166227 39166300 -46272180 + L1PA8 LINE L1 6086 6157 -15 371 77 0 0 chr17 39166300 39166352 -46272128 - Alu SINE Alu -2 298 247 216 0 0 0 chr17 39166354 39166378 -46272102 + (A)n Simple_repeat Simple_repeat 1 24 0 2404 61 0 0 chr17 39166461 39166756 -46271724 + AluY SINE Alu 1 295 -16 788 166 0 58 chr17 39166894 39167033 -46271447 + FLAM_C SINE Alu 1 131 -2 2221 94 3 0 chr17 39168398 39168697 -46269783 - AluSp SINE Alu -13 300 1 373 290 65 15 chr17 39169778 39169978 -46268502 + L1ME LINE L1 5476 5685 -436 288 239 87 11 chr17 39169986 39170078 -46268402 + L1ME LINE L1 5718 5816 -305 2142 77 0 18 chr17 39170186 39170509 -46267971 + AluY SINE Alu 1 318 0 1611 160 3 7 chr17 39170570 39170863 -46267617 + AluSp SINE Alu 1 292 -21 1393 167 3 58 chr17 39170875 39171032 -46267448 - AluJo SINE Alu -20 292 157 2196 90 3 13 chr17 39171032 39171332 -46267148 - AluSp SINE Alu -16 297 1 1393 167 3 58 chr17 39171332 39171468 -46267012 - AluJo SINE Alu -155 157 15 717 161 8 0 chr17 39171515 39171633 -46266847 + FLAM_C SINE Alu 1 119 -24 207 100 0 0 chr17 39172202 39172232 -46266248 + (TA)n Simple_repeat Simple_repeat 2 31 0 1996 125 0 7 chr17 39172232 39172521 -46265959 - AluSx SINE Alu -25 287 1 1119 137 11 0 chr17 39173237 39173412 -46265068 + AluSg/x SINE Alu 135 311 -1 619 133 13 40 chr17 39173425 39173575 -46264905 + GA-rich Low_complexity Low_complexity 3 148 0 192 229 0 0 chr17 39173937 39173972 -46264508 - MIR SINE MIR -10 252 218 1221 93 0 0 chr17 39174029 39174191 -46264289 - AluSg/x SINE Alu -14 296 135 1296 173 24 8 chr17 39174310 39174558 -46263922 + AluJb SINE Alu 37 288 -24 24 32 0 0 chr17 39174558 39174589 -46263891 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr17 39175382 39175410 -46263070 + AT_rich Low_complexity Low_complexity 1 28 0 2110 116 0 10 chr17 39175797 39176098 -46262382 - AluSx SINE Alu -14 298 1 2069 95 3 7 chr17 39176180 39176500 -46261980 - AluSp SINE Alu 0 319 1 663 145 0 109 chr17 39176504 39176554 -46261926 - FLAM_C SINE Alu -179 123 69 2056 118 3 3 chr17 39176554 39176850 -46261630 - AluSx SINE Alu -16 296 1 663 145 0 109 chr17 39176850 39176937 -46261543 - FLAM_C SINE Alu -233 69 1 1765 112 100 0 chr17 39177383 39177673 -46260807 + AluSq SINE Alu 1 316 0 222 280 147 13 chr17 39178657 39178732 -46259748 - L2 LINE L2 -7 3265 3181 1371 78 0 6 chr17 39178781 39178961 -46259519 - AluSp SINE Alu -133 180 2 1683 142 18 21 chr17 39178988 39179270 -46259210 + AluJo SINE Alu 1 281 -31 412 160 19 66 chr17 39179277 39179383 -46259097 + FLAM_A SINE Alu 42 142 0 1843 145 50 0 chr17 39181624 39181921 -46256559 - AluSx SINE Alu 0 312 1 245 266 78 0 chr17 39181984 39182048 -46256432 - L2 LINE L2 -5 3308 3240 2281 87 6 19 chr17 39182323 39182497 -46255983 - AluSx SINE Alu -5 307 137 2463 81 0 0 chr17 39182497 39182795 -46255685 - AluY SINE Alu -13 298 1 2281 87 6 19 chr17 39182795 39182931 -46255549 - AluSx SINE Alu -175 137 1 879 111 8 0 chr17 39183723 39183849 -46254631 + AluSg/x SINE Alu 178 304 -6 390 42 0 0 chr17 39184566 39184614 -46253866 + (CA)n Simple_repeat Simple_repeat 1 48 0 210 227 23 0 chr17 39184756 39184800 -46253680 + L2 LINE L2 3222 3266 -6 679 282 93 34 chr17 39185488 39185843 -46252637 + L1ME4a LINE L1 5471 5846 -275 2385 103 3 0 chr17 39185846 39186157 -46252323 + AluSp SINE Alu 1 312 -1 1213 200 19 74 chr17 39186206 39186516 -46251964 - AluJb SINE Alu -8 294 2 1139 146 39 10 chr17 39186615 39186840 -46251640 - L1MB3 LINE L1 -34 6149 5936 312 216 0 0 chr17 39186849 39186900 -46251580 - MER66A LTR ERV1 -141 337 287 657 164 0 0 chr17 39186902 39187006 -46251474 - L1MB3 LINE L1 -232 5948 5845 1997 132 0 33 chr17 39187496 39187799 -46250681 + AluSx SINE Alu 1 293 -19 972 102 0 0 chr17 39188011 39188138 -46250342 - AluSp/q SINE Alu -11 302 176 1809 169 13 7 chr17 39188193 39188495 -46249985 + AluJb SINE Alu 1 304 -8 225 272 18 12 chr17 39188658 39188740 -46249740 + MIR SINE MIR 64 148 -62 2033 116 0 4 chr17 39188837 39189114 -46249366 - AluSx SINE Alu -11 301 26 215 150 0 25 chr17 39189183 39189223 -46249257 + (TG)n Simple_repeat Simple_repeat 1 39 0 1846 158 3 3 chr17 39193764 39194083 -46244397 + AluJb SINE Alu 1 319 0 2287 116 0 0 chr17 39194560 39194871 -46243609 + AluSx SINE Alu 2 312 0 1221 129 0 0 chr17 39194885 39195055 -46243425 + AluSc SINE Alu 130 299 -10 324 186 114 0 chr17 39195355 39195425 -46243055 + MIR3 SINE MIR 125 202 -6 732 128 64 86 chr17 39195433 39195620 -46242860 + L1PA15 LINE L1 5974 6156 -9 224 157 39 59 chr17 39195839 39195890 -46242590 - L2 LINE L2 -8 3264 3215 832 153 15 8 chr17 39195936 39196067 -46242413 + AluSq/x SINE Alu 2 133 -179 798 259 47 4 chr17 39196079 39196311 -46242169 + MIR SINE MIR 20 261 -1 1606 154 63 21 chr17 39196495 39196781 -46241699 - AluJo SINE Alu -14 298 1 39 18 0 18 chr17 39196802 39196834 -46241646 + AT_rich Low_complexity Low_complexity 1 33 -23 2012 115 10 34 chr17 39196834 39197130 -46241350 - AluSx SINE Alu -23 289 1 39 18 0 18 chr17 39197130 39197154 -46241326 + AT_rich Low_complexity Low_complexity 33 56 0 679 205 0 0 chr17 39197154 39197271 -46241209 - FLAM_C SINE Alu -25 118 2 2304 76 7 20 chr17 39197284 39197585 -46240895 - AluSp SINE Alu -15 298 2 2263 113 3 3 chr17 39197723 39198034 -46240446 - AluSp SINE Alu -2 311 1 752 145 24 8 chr17 39198512 39198636 -46239844 + FLAM_C SINE Alu 2 127 -16 1131 129 0 35 chr17 39198802 39198973 -46239507 - AluSg/x SINE Alu -15 297 133 849 91 34 17 chr17 39198988 39199164 -46239316 + (TA)n Simple_repeat Simple_repeat 2 180 0 2240 99 7 0 chr17 39199200 39199492 -46238988 - AluSx SINE Alu -18 294 1 1972 156 0 0 chr17 39199654 39199956 -46238524 - AluSg SINE Alu -8 302 1 2201 122 3 0 chr17 39199967 39200263 -46238217 - AluSx SINE Alu -15 297 1 1218 172 68 68 chr17 39200369 39200532 -46237948 - AluJo SINE Alu -16 296 134 2191 92 0 3 chr17 39200532 39200816 -46237664 - AluY SINE Alu -12 299 17 2309 101 0 0 chr17 39200819 39201116 -46237364 - AluSc SINE Alu -12 297 1 1591 186 28 7 chr17 39201118 39201408 -46237072 - AluJo SINE Alu -16 296 1 1218 172 68 68 chr17 39201408 39201533 -46236947 - AluJo SINE Alu -180 132 1 2389 95 0 0 chr17 39201647 39201951 -46236529 + AluSx SINE Alu 1 304 -8 609 206 28 0 chr17 39201975 39202082 -46236398 - FLAM_A SINE Alu -32 110 1 1596 99 0 0 chr17 39202287 39202488 -46235992 + AluSx SINE Alu 1 201 -111 335 96 0 0 chr17 39202488 39202569 -46235911 + AluSx SINE Alu 250 330 0 23 33 0 0 chr17 39202853 39202883 -46235597 + AT_rich Low_complexity Low_complexity 1 30 0 719 204 35 6 chr17 39202992 39203164 -46235316 - MER104 DNA MER2_type -3 177 1 1598 208 0 10 chr17 39203700 39204003 -46234477 - AluJo SINE Alu -12 300 1 313 252 145 38 chr17 39204159 39204290 -46234190 - L2 LINE L2 0 3313 3169 1869 128 43 4 chr17 39204327 39204608 -46233872 + AluJb SINE Alu 18 309 -3 1007 193 0 103 chr17 39205366 39205525 -46232955 + L1M4 LINE L1 4730 4904 -1242 2555 53 3 0 chr17 39205525 39205825 -46232655 - AluY SINE Alu -10 301 1 1851 130 60 17 chr17 39205831 39206130 -46232350 - AluSx SINE Alu 0 312 1 1007 193 0 103 chr17 39206130 39206274 -46232206 + L1M4 LINE L1 4909 5008 -1138 1814 146 35 3 chr17 39206525 39206812 -46231668 + AluSx SINE Alu 1 296 -16 2002 112 30 16 chr17 39206891 39207195 -46231285 + AluSx SINE Alu 1 308 -4 2059 80 84 0 chr17 39207195 39207481 -46230999 + AluSp SINE Alu 1 308 0 249 119 0 0 chr17 39207493 39207535 -46230945 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 1204 188 5 13 chr17 39207535 39207759 -46230721 - AluJb SINE Alu -90 222 1 2441 75 0 0 chr17 39208361 39208656 -46229824 - AluY SINE Alu -16 295 1 1796 183 3 7 chr17 39208767 39209067 -46229413 + AluJb SINE Alu 1 299 -13 817 141 25 0 chr17 39209155 39209276 -46229204 + AluSq/x SINE Alu 1 124 -188 2411 97 0 0 chr17 39209281 39209579 -46228901 + AluSx SINE Alu 1 298 -14 2271 116 0 0 chr17 39209700 39210001 -46228479 + AluSx SINE Alu 1 301 -11 2419 73 0 3 chr17 39210002 39210334 -46228146 + AluY SINE Alu 1 311 0 2268 103 7 0 chr17 39210557 39210848 -46227632 - AluSg SINE Alu -17 293 1 873 223 16 0 chr17 39210901 39211089 -46227391 + AluJo SINE Alu 109 299 -13 241 239 15 15 chr17 39211089 39211156 -46227324 + (TA)n Simple_repeat Simple_repeat 2 68 0 2290 96 7 0 chr17 39211262 39211565 -46226915 - AluSp SINE Alu -8 305 1 1910 132 0 7 chr17 39211825 39212129 -46226351 - AluSc SINE Alu 0 302 1 2104 104 35 3 chr17 39212263 39212550 -46225930 + AluSq SINE Alu 1 296 -17 873 194 0 0 chr17 39212550 39212694 -46225786 - FRAM SINE Alu -32 144 1 392 86 86 14 chr17 39212853 39212923 -46225557 - AluJ/FRAM SINE Alu -4 298 224 2368 98 0 0 chr17 39213684 39213979 -46224501 + AluSg SINE Alu 1 295 -15 21 0 0 0 chr17 39214284 39214305 -46224175 + AT_rich Low_complexity Low_complexity 1 21 0 198 224 318 0 chr17 39214368 39214453 -46224027 - L2 LINE L2 -5 3308 3197 377 164 116 68 chr17 39214686 39214832 -46223648 - L1MC5 LINE L1 -39 7922 7770 712 167 114 0 chr17 39214842 39214974 -46223506 - FRAM SINE Alu -26 150 4 2089 116 7 3 chr17 39214987 39215280 -46223200 - AluSq SINE Alu -19 294 1 840 188 101 61 chr17 39215282 39215559 -46222921 - L1MC5 LINE L1 -444 7517 7230 1920 158 0 7 chr17 39215621 39215918 -46222562 + AluSx SINE Alu 1 295 -17 2127 117 3 13 chr17 39215921 39216228 -46222252 + AluSg SINE Alu 1 304 -6 798 278 92 40 chr17 39216321 39216830 -46221650 - L2 LINE L2 -12 3301 2765 1180 109 0 12 chr17 39216833 39216998 -46221482 - AluSg/x SINE Alu -9 303 141 342 136 10 5 chr17 39216998 39217065 -46221415 - Alu SINE Alu -250 50 6 785 177 0 0 chr17 39217074 39217198 -46221282 - FLAM_C SINE Alu -9 124 1 1792 147 41 20 chr17 39217223 39217515 -46220965 - AluSx SINE Alu -14 298 1 483 110 330 0 chr17 39217647 39217747 -46220733 + FLAM_C SINE Alu 1 133 0 244 290 97 16 chr17 39217836 39217960 -46220520 + MIR3 SINE MIR 2 135 -73 2536 53 0 0 chr17 39218945 39219246 -46219234 + AluY SINE Alu 1 301 -10 1905 89 37 22 chr17 39219255 39219526 -46218954 + AluSg SINE Alu 1 275 -35 2304 81 0 0 chr17 39219555 39219863 -46218617 + AluY SINE Alu 1 308 0 2315 101 7 0 chr17 39219866 39220174 -46218306 + AluSp SINE Alu 3 312 -1 638 260 116 29 chr17 39220801 39221078 -46217402 - L2 LINE L2 -2 3311 3011 1640 157 17 27 chr17 39221087 39221226 -46217254 + AluJb SINE Alu 1 140 -172 2332 98 0 35 chr17 39221226 39221543 -46216937 + AluY SINE Alu 1 306 -5 1640 157 17 27 chr17 39221543 39221697 -46216783 + AluJb SINE Alu 140 291 -21 2157 107 20 0 chr17 39221811 39222109 -46216371 - AluSc SINE Alu -5 304 1 270 0 0 0 chr17 39223209 39223239 -46215241 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1675 58 53 0 chr17 39223243 39223451 -46215029 - AluSg SINE Alu -37 273 55 4766 136 92 116 chr17 39225104 39226204 -46212276 + pTR5 LTR ERV1 714 1965 -473 2307 101 0 3 chr17 39226204 39226512 -46211968 + AluY SINE Alu 2 308 -3 4766 136 92 116 chr17 39226512 39226975 -46211505 + pTR5 LTR ERV1 1965 2438 0 894 99 0 57 chr17 39227279 39227420 -46211060 - FLAM_C SINE Alu 0 133 1 2342 84 0 16 chr17 39227927 39228235 -46210245 - AluY SINE Alu -7 304 2 733 145 16 16 chr17 39228652 39228776 -46209704 - FLAM_C SINE Alu -9 124 1 2087 141 3 0 chr17 39228778 39229076 -46209404 - AluSx SINE Alu -13 299 1 21 0 0 0 chr17 39229078 39229099 -46209381 + AT_rich Low_complexity Low_complexity 1 21 0 390 279 48 26 chr17 39229136 39229303 -46209177 - MIR SINE MIR -63 145 24 2481 91 3 0 chr17 39229652 39229960 -46208520 + AluSc SINE Alu 1 309 0 606 219 73 0 chr17 39230137 39230260 -46208220 + AluJb SINE Alu 4 135 -177 1410 182 45 17 chr17 39230260 39230551 -46207929 + AluJo SINE Alu 1 299 -13 2105 95 0 15 chr17 39230557 39230831 -46207649 + AluSq SINE Alu 1 270 -43 2287 112 3 0 chr17 39231001 39231304 -46207176 + AluSx SINE Alu 1 304 -8 364 279 88 28 chr17 39231384 39231579 -46206901 + MIR3 SINE MIR 2 212 -50 2293 81 0 0 chr17 39232613 39232908 -46205572 - AluY SINE Alu -4 307 13 2012 85 16 46 chr17 39233321 39233505 -46204975 - AluSp SINE Alu -17 296 123 2448 51 0 0 chr17 39233505 39233800 -46204680 - AluY SINE Alu -15 296 2 2012 85 16 46 chr17 39233800 39233920 -46204560 - AluSp SINE Alu -190 123 1 25 0 0 0 chr17 39234022 39234047 -46204433 + AT_rich Low_complexity Low_complexity 1 25 0 689 138 18 0 chr17 39234397 39234506 -46203974 - AluSq/x SINE Alu -200 112 2 624 80 8 104 chr17 39234615 39234740 -46203740 - L1MA9 LINE L1 -33 6279 6167 1998 130 0 0 chr17 39234750 39235049 -46203431 - AluSx SINE Alu -12 300 2 838 178 0 0 chr17 39235050 39235179 -46203301 - AluJo/FLAM SINE Alu -173 129 1 2220 98 0 0 chr17 39235209 39235504 -46202976 - AluSc SINE Alu -13 296 2 725 247 0 7 chr17 39235504 39235650 -46202830 - AluJb SINE Alu -32 280 136 1724 174 20 0 chr17 39235652 39235946 -46202534 - AluSx SINE Alu -12 300 1 21 36 0 0 chr17 39235961 39235989 -46202491 + AT_rich Low_complexity Low_complexity 1 28 0 644 144 13 157 chr17 39236027 39236180 -46202300 - AluJb SINE Alu -23 289 159 252 202 169 45 chr17 39236309 39236398 -46202082 + MIR3 SINE MIR 94 193 -15 1170 81 17 12 chr17 39236398 39236571 -46201909 + AluSp SINE Alu 124 297 -16 1779 147 125 20 chr17 39236596 39237003 -46201477 - LTR7 LTR ERV1 0 450 1 1111 77 13 26 chr17 39237343 39237363 -46201117 - AluSq SINE Alu -159 154 135 1815 105 49 56 chr17 39237363 39237668 -46200812 - AluY SINE Alu -8 303 1 1111 77 13 26 chr17 39237668 39237803 -46200677 - AluSq SINE Alu -178 135 1 197 301 71 96 chr17 39238018 39238057 -46200423 + L2 LINE L2 2037 2075 -1239 2098 113 0 3 chr17 39238057 39238357 -46200123 - AluSx SINE Alu -12 300 2 197 301 71 96 chr17 39238357 39238381 -46200099 + L2 LINE L2 2075 2098 -1216 1615 167 35 0 chr17 39238381 39238668 -46199812 - AluJb SINE Alu -15 297 1 197 301 71 96 chr17 39238668 39238842 -46199638 + L2 LINE L2 2098 2269 -1045 548 250 0 0 chr17 39239085 39239197 -46199283 - MER81 DNA DNA -1 113 2 921 193 0 6 chr17 39239571 39239737 -46198743 + AluSx SINE Alu 7 171 -141 207 0 0 0 chr17 39239755 39239778 -46198702 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1559 189 0 20 chr17 39239876 39240178 -46198302 + AluJo SINE Alu 1 296 -16 593 225 104 23 chr17 39240212 39240385 -46198095 - MIR SINE MIR -28 234 48 2057 122 0 13 chr17 39240707 39240841 -46197639 + AluSg SINE Alu 1 135 -175 2227 86 0 29 chr17 39240841 39241154 -46197326 + AluY SINE Alu 1 304 -7 2057 122 0 13 chr17 39241154 39241331 -46197149 + AluSg SINE Alu 135 308 -2 369 143 0 29 chr17 39241414 39241484 -46196996 - L1MC5 LINE L1 -523 7438 7371 3485 84 19 13 chr17 39241484 39241958 -46196522 + LTR15 LTR ERV1 1 477 -16 390 204 131 73 chr17 39241974 39242111 -46196369 - L1MC5 LINE L1 -587 7374 7230 1921 132 3 7 chr17 39242173 39242469 -46196011 + AluSx SINE Alu 1 295 -17 2080 99 0 0 chr17 39242472 39242756 -46195724 + AluSg SINE Alu 1 284 -26 355 138 0 0 chr17 39242769 39242827 -46195653 + Alu SINE Alu 244 301 -1 936 277 96 41 chr17 39242915 39243434 -46195046 - L2 LINE L2 0 3313 2765 1122 124 0 0 chr17 39243437 39243598 -46194882 - AluSg/x SINE Alu -11 301 141 385 118 4 4 chr17 39243598 39243666 -46194814 - Alu SINE Alu -253 50 1 732 205 0 0 chr17 39243675 39243797 -46194683 - FLAM_C SINE Alu -9 124 3 1403 177 42 38 chr17 39243803 39244091 -46194389 - AluSx SINE Alu -23 289 1 1958 158 0 0 chr17 39244201 39244512 -46193968 - AluSx SINE Alu -1 311 1 445 150 170 0 chr17 39244516 39244616 -46193864 - MIR SINE MIR -64 198 82 202 318 0 30 chr17 39244812 39244878 -46193602 - MIR SINE MIR -171 91 28 269 195 0 130 chr17 39244917 39244994 -46193486 + MIR SINE MIR 48 114 -148 1289 93 6 6 chr17 39244996 39245179 -46193301 - AluSc SINE Alu 0 309 127 2298 75 0 28 chr17 39245180 39245500 -46192980 - AluY SINE Alu 0 311 1 266 256 122 11 chr17 39245502 39245592 -46192888 + MIR SINE MIR 104 203 -59 182 307 182 11 chr17 39245793 39245881 -46192599 + MER5A DNA MER1_type 68 170 -19 2171 123 0 0 chr17 39246054 39246363 -46192117 - AluSx SINE Alu -3 309 1 415 271 8 8 chr17 39247469 39247598 -46190882 + MLT1H LTR MaLR 95 223 -326 756 144 16 0 chr17 39248441 39248566 -46189914 + FLAM_C SINE Alu 2 128 -5 7173 56 9 2 chr17 39248597 39249870 -46188610 + L1PA5 LINE L1 4875 6154 0 1760 138 25 4 chr17 39250028 39250324 -46188156 + AluSx SINE Alu 1 302 0 2093 123 10 0 chr17 39250334 39250643 -46187837 + AluSq SINE Alu 1 312 -1 224 377 0 0 chr17 39250651 39250728 -46187752 + L2 LINE L2 353 429 -2885 285 197 0 16 chr17 39251428 39251489 -46186991 + LTR33A LTR ERVL 443 502 -21 501 190 0 0 chr17 39251513 39251592 -46186888 + MER21B LTR ERV1 12 90 -773 21 0 0 0 chr17 39251607 39251628 -46186852 + AT_rich Low_complexity Low_complexity 1 21 0 2236 136 0 27 chr17 39251663 39251791 -46186689 - L1PA14 LINE L1 0 6161 6031 2056 99 27 0 chr17 39251791 39252083 -46186397 - AluSg SINE Alu -10 300 1 2236 136 0 27 chr17 39252083 39252323 -46186157 - L1PA14 LINE L1 -130 6031 5803 1838 234 56 10 chr17 39252338 39252940 -46185540 + MER21B LTR ERV1 22 682 -181 183 324 139 52 chr17 39252953 39253240 -46185240 + L2 LINE L2 2924 3235 -37 994 138 0 12 chr17 39253750 39253910 -46184570 + FRAM SINE Alu 1 156 -20 28 29 0 0 chr17 39253928 39253963 -46184517 + AT_rich Low_complexity Low_complexity 1 35 0 1551 66 15 0 chr17 39253965 39254162 -46184318 + AluY SINE Alu 3 202 -109 1586 122 0 8 chr17 39254267 39254504 -46183976 - AluSx SINE Alu -77 235 1 218 266 38 51 chr17 39254571 39254650 -46183830 + L2 LINE L2 3175 3252 -20 345 317 74 45 chr17 39254758 39255001 -46183479 + MIR SINE MIR 13 262 0 1202 131 0 0 chr17 39255032 39255208 -46183272 - AluSp SINE Alu -11 302 127 180 0 0 0 chr17 39255208 39255228 -46183252 + (TG)n Simple_repeat Simple_repeat 2 21 0 306 197 56 14 chr17 39255232 39255303 -46183177 + L1MC4 LINE L1 1995 2068 -4358 * 382 223 9 23 chr17 39255271 39255379 -46183101 + L1MC4 LINE L1 1995 6983 -1339 207 0 0 0 chr17 39255379 39255402 -46183078 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 886 113 8 0 chr17 39255407 39255531 -46182949 - AluSp SINE Alu -188 125 1 26 30 0 0 chr17 39256193 39256226 -46182254 + AT_rich Low_complexity Low_complexity 1 33 0 2247 74 0 10 chr17 39256229 39256528 -46181952 + AluY SINE Alu 1 296 -15 749 125 0 0 chr17 39257032 39257136 -46181344 + AluSq/x SINE Alu 4 107 -206 810 143 0 15 chr17 39257600 39257733 -46180747 + AluSg/x SINE Alu 168 298 -12 2249 71 10 3 chr17 39257734 39258031 -46180449 + AluSp SINE Alu 3 301 -12 714 284 92 21 chr17 39258680 39258962 -46179518 - L2 LINE L2 -1 3312 3011 1462 155 66 4 chr17 39258971 39259088 -46179392 + AluJb SINE Alu 1 109 -203 195 69 0 0 chr17 39259088 39259117 -46179363 + (CA)n Simple_repeat Simple_repeat 2 30 0 1462 155 66 4 chr17 39259117 39259270 -46179210 + AluJb SINE Alu 109 288 -24 284 95 0 0 chr17 39259271 39259313 -46179167 + L1ME3 LINE L1 6121 6162 0 2013 68 18 35 chr17 39259319 39259877 -46178603 + SVA Other Other 499 1386 0 1529 74 0 15 chr17 39260060 39260263 -46178217 - AluY SINE Alu -13 298 99 1850 180 66 59 chr17 39260263 39260719 -46177761 - LTR2B LTR ERV1 0 490 32 40456 58 30 21 chr17 39260738 39265905 -46172575 - Harlequin LTR ERV1 0 6896 1678 384 42 0 0 chr17 39265905 39265953 -46172527 + L1PA3 LINE L1 6103 6150 -5 40456 58 30 21 chr17 39265953 39266064 -46172416 - Harlequin LTR ERV1 -5218 1678 1570 7328 76 20 98 chr17 39266047 39266153 -46172327 - Harlequin LTR ERV1 -5792 1104 991 * 189 0 0 0 chr17 39266153 39266174 -46172306 + (TG)n Simple_repeat Simple_repeat 2 22 0 7328 76 20 98 chr17 39266174 39267264 -46171216 - Harlequin LTR ERV1 -5905 991 1 1870 189 69 32 chr17 39267265 39267698 -46170782 - LTR2B LTR ERV1 -10 480 32 769 79 0 0 chr17 39267717 39267818 -46170662 - AluY SINE Alu -209 102 2 2117 96 3 7 chr17 39268374 39268677 -46169803 + AluSp SINE Alu 1 302 -11 2112 79 35 0 chr17 39269194 39269484 -46168996 - AluSg SINE Alu -9 301 2 709 146 0 62 chr17 39271831 39271961 -46166519 - FLAM_C SINE Alu -11 122 1 2382 68 0 3 chr17 39272837 39273144 -46165336 - AluY SINE Alu -5 306 1 763 137 16 16 chr17 39273177 39273301 -46165179 - FLAM_C SINE Alu -9 124 1 1948 137 13 0 chr17 39273303 39273603 -46164877 - AluSx SINE Alu -8 304 1 327 332 72 27 chr17 39273664 39273849 -46164631 - MIR3 SINE MIR -63 145 3 803 182 105 42 chr17 39274035 39274321 -46164159 + L1MC5 LINE L1 7624 7927 -34 2083 99 0 7 chr17 39274335 39274628 -46163852 + AluY SINE Alu 3 293 -18 28 0 0 0 chr17 39274631 39274659 -46163821 + AT_rich Low_complexity Low_complexity 1 28 0 2019 96 22 38 chr17 39274832 39275145 -46163335 + AluY SINE Alu 1 308 -3 281 275 25 12 chr17 39275330 39275410 -46163070 + L2 LINE L2 3190 3270 -43 360 250 156 0 chr17 39275642 39275738 -46162742 + L2 LINE L2 3198 3308 -5 268 197 0 0 chr17 39276757 39276823 -46161657 - L1MA9 LINE L1 -19 6293 6228 1944 133 76 3 chr17 39276823 39277139 -46161341 - MER7A DNA MER2_type 0 346 10 297 222 56 133 chr17 39277139 39277319 -46161161 - L1MA9 LINE L1 -93 6219 6054 26 0 0 0 chr17 39277375 39277401 -46161079 + AT_rich Low_complexity Low_complexity 1 26 0 30 0 0 0 chr17 39277498 39277528 -46160952 + AT_rich Low_complexity Low_complexity 1 30 0 1737 168 3 3 chr17 39277535 39277833 -46160647 - AluJb SINE Alu -14 298 1 1783 153 3 7 chr17 39278721 39279021 -46159459 + AluJb SINE Alu 1 299 -13 456 279 93 110 chr17 39279021 39279305 -46159175 - L1ME LINE L1 -371 5750 5462 441 0 0 0 chr17 39279305 39279354 -46159126 + (CA)n Simple_repeat Simple_repeat 2 50 0 456 279 93 110 chr17 39279354 39279549 -46158931 - L1ME LINE L1 -659 5462 5265 771 143 0 34 chr17 39279964 39280083 -46158397 - FLAM_C SINE Alu -27 116 2 1244 145 0 0 chr17 39280099 39280292 -46158188 - AluSg/x SINE Alu -2 310 118 5849 51 1 36 chr17 39280841 39282208 -46156272 - L1PA7 LINE L1 -1 6153 5413 3741 53 11 43 chr17 39281332 39281501 -46156979 - L1PA7 LINE L1 -492 5662 5489 2430 84 0 7 chr17 39281501 39281800 -46156680 - AluY SINE Alu -14 297 1 3741 53 11 43 chr17 39281800 39281823 -46156657 - L1PA7 LINE L1 -665 5489 5467 2291 112 0 3 chr17 39281823 39282128 -46156352 - AluSg SINE Alu -6 304 1 3741 53 11 43 chr17 39282128 39282201 -46156279 - L1PA7 LINE L1 -687 5467 5393 2542 84 0 0 chr17 39282201 39282510 -46155970 - AluY SINE Alu -2 309 1 954 68 0 15 chr17 39282208 39282332 -46156148 - AluY SINE Alu -9 302 179 3741 53 11 43 chr17 39282510 39283059 -46155421 - L1PA7 LINE L1 -761 5393 4875 258 51 0 51 chr17 39284387 39284426 -46154054 - Alu SINE Alu -252 48 12 182 267 0 0 chr17 39284564 39284609 -46153871 + MIR SINE MIR 108 152 -110 699 209 0 0 chr17 39284818 39284952 -46153528 - AluJb SINE Alu -45 267 134 186 43 0 0 chr17 39284953 39284976 -46153504 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2665 34 0 0 chr17 39284986 39285278 -46153202 - AluY SINE Alu -19 292 1 1301 200 117 19 chr17 39285289 39285554 -46152926 - AluJo SINE Alu -21 291 1 2213 118 53 6 chr17 39285611 39285967 -46152513 + MER39B LTR ERV1 6 378 -275 483 188 0 0 chr17 39285967 39286052 -46152428 + AluJ/FLAM SINE Alu 2 86 -226 2562 60 0 3 chr17 39286196 39286498 -46151982 - AluY SINE Alu -10 301 1 757 206 94 0 chr17 39286543 39286703 -46151777 + FAM SINE Alu 1 175 0 1374 184 14 11 chr17 39286704 39286987 -46151493 + MER39B LTR ERV1 366 649 -4 820 180 0 0 chr17 39287013 39287152 -46151328 + FLAM_C SINE Alu 1 139 -4 22 0 0 0 chr17 39287295 39287317 -46151163 + AT_rich Low_complexity Low_complexity 1 22 0 660 251 69 5 chr17 39287318 39287521 -46150959 - L2 LINE L2 0 3313 3098 1159 124 0 28 chr17 39287646 39287823 -46150657 - AluSg/x SINE Alu -4 308 137 2050 134 7 7 chr17 39287823 39288130 -46150350 - AluSq SINE Alu -6 307 1 1320 131 0 185 chr17 39288136 39288503 -46149977 - AluJb SINE Alu -11 301 3 326 215 172 0 chr17 39288692 39288785 -46149695 + MIR SINE MIR 29 137 -125 229 284 81 0 chr17 39288978 39289052 -46149428 - MIR SINE MIR -90 172 93 546 237 23 8 chr17 39289989 39290120 -46148360 - FRAM SINE Alu -6 170 38 2052 113 6 52 chr17 39290242 39290569 -46147911 - AluSx SINE Alu 0 312 1 2437 92 0 13 chr17 39290934 39291249 -46147231 - AluSp SINE Alu -2 311 1 461 240 201 59 chr17 39291350 39291708 -46146772 + L2 LINE L2 560 968 -2346 184 279 190 25 chr17 39291712 39291791 -46146689 + L2 LINE L2 1128 1219 -2095 2548 87 28 8 chr17 39291851 39292208 -46146272 - THE1B LTR MaLR 0 364 1 7932 102 6 48 chr17 39292216 39292385 -46146095 - THE1B-int LTR MaLR -9 1571 1397 2381 103 0 7 chr17 39292385 39292687 -46145793 + AluSx SINE Alu 1 300 -12 7932 102 6 48 chr17 39292687 39292825 -46145655 - THE1B-int LTR MaLR -183 1397 1255 2389 101 0 10 chr17 39292825 39293132 -46145348 - AluSx SINE Alu -7 305 2 7932 102 6 48 chr17 39293132 39293917 -46144563 - THE1B-int LTR MaLR -325 1255 439 2380 109 0 0 chr17 39293917 39294221 -46144259 - AluSc SINE Alu -5 304 1 7932 102 6 48 chr17 39294221 39294286 -46144194 - THE1B-int LTR MaLR -1141 439 373 1924 144 17 0 chr17 39294286 39294577 -46143903 - AluSg SINE Alu -14 296 1 7932 102 6 48 chr17 39294577 39294602 -46143878 - THE1B-int LTR MaLR -1207 373 349 2307 100 3 13 chr17 39294602 39294912 -46143568 + AluSg SINE Alu 1 307 -3 1829 162 23 3 chr17 39294917 39295220 -46143260 + AluSq SINE Alu 3 311 -2 7932 102 6 48 chr17 39295220 39295282 -46143198 - THE1B-int LTR MaLR -1148 432 369 2245 114 10 0 chr17 39295290 39295597 -46142883 + AluSp SINE Alu 2 311 -2 1983 124 30 0 chr17 39295614 39295912 -46142568 + AluSp SINE Alu 6 312 -1 2175 105 0 10 chr17 39295958 39296271 -46142209 + AluSg SINE Alu 1 310 0 2108 95 3 20 chr17 39296282 39296588 -46141892 + AluSp SINE Alu 9 309 -4 468 252 16 8 chr17 39296597 39296724 -46141756 - MER33 DNA MER1_type -194 130 3 4881 163 19 44 chr17 39296882 39297914 -46140566 - LTR13 LTR ERVK 0 1007 1 318 178 85 119 chr17 39297917 39298035 -46140445 - MER96B DNA MER1_type? -303 114 1 257 291 28 104 chr17 39298362 39298719 -46139761 - L2 LINE L2 -1 3271 2942 848 82 8 16 chr17 39299276 39299398 -46139082 - AluSp SINE Alu -188 125 5 2422 71 3 3 chr17 39299402 39299697 -46138783 - AluY SINE Alu -12 299 5 2242 97 20 3 chr17 39299701 39299999 -46138481 - AluSx SINE Alu -8 304 2 1096 171 11 0 chr17 39300006 39300187 -46138293 - AluSg/x SINE Alu -13 299 117 1566 155 90 11 chr17 39300420 39300698 -46137782 - AluJb SINE Alu -12 300 1 278 313 42 14 chr17 39300750 39300911 -46137569 - MIR3 SINE MIR -62 146 5 1554 233 0 7 chr17 39301296 39301597 -46136883 + AluJo SINE Alu 1 299 -13 2378 82 3 7 chr17 39302045 39302348 -46136132 - AluY SINE Alu -9 302 1 2371 84 0 10 chr17 39302348 39302645 -46135835 - AluSg SINE Alu -12 298 4 2460 65 0 26 chr17 39302685 39302995 -46135485 - AluY SINE Alu -9 302 1 396 201 104 14 chr17 39304431 39304575 -46133905 + L1MD3 LINE L1 7838 7994 -1 1799 148 3 57 chr17 39305549 39305697 -46132783 + AluJb SINE Alu 2 126 -186 2486 83 3 0 chr17 39305697 39305999 -46132481 + AluSp SINE Alu 1 303 -10 1799 148 3 57 chr17 39305999 39306167 -46132313 + AluJb SINE Alu 126 301 -11 2447 98 0 0 chr17 39306169 39306476 -46132004 + AluSg1 SINE Alu 1 307 -2 2486 74 0 0 chr17 39307563 39307861 -46130619 + AluY SINE Alu 1 298 -13 2176 94 6 50 chr17 39308195 39308513 -46129967 + AluSp SINE Alu 1 304 -9 2285 104 3 0 chr17 39308697 39308994 -46129486 + AluSg SINE Alu 1 298 -12 2290 91 0 7 chr17 39309004 39309290 -46129190 + AluY SINE Alu 1 284 -27 233 233 70 23 chr17 39309326 39309412 -46129068 + L1ME4a LINE L1 5946 6035 -86 1452 213 45 3 chr17 39309412 39309698 -46128782 - AluJb SINE Alu -14 298 1 2205 89 14 7 chr17 39309706 39309998 -46128482 - AluY SINE Alu -17 294 1 288 70 0 0 chr17 39310569 39310612 -46127868 + (GGA)n Simple_repeat Simple_repeat 1 43 0 2003 166 0 0 chr17 39311191 39311492 -46126988 - AluJb SINE Alu -11 301 1 2315 93 0 7 chr17 39312221 39312521 -46125959 + AluSg SINE Alu 1 298 -12 240 317 102 24 chr17 39312604 39312771 -46125709 + MIR SINE MIR 12 191 -71 1878 111 12 0 chr17 39313236 39313488 -46124992 + AluSg SINE Alu 38 292 -18 2468 77 0 3 chr17 39314262 39314561 -46123919 - AluY SINE Alu -13 298 1 245 163 0 0 chr17 39314563 39314606 -46123874 + MIR SINE MIR 65 107 -155 1806 168 0 29 chr17 39314711 39314858 -46123622 + AluJo SINE Alu 1 151 -161 2340 84 3 3 chr17 39314858 39315155 -46123325 + AluSc SINE Alu 1 297 -12 1806 168 0 29 chr17 39315155 39315317 -46123163 + AluJo SINE Alu 151 301 -11 2437 92 0 0 chr17 39315396 39315688 -46122792 + AluSg SINE Alu 1 292 -18 306 331 65 13 chr17 39315724 39315878 -46122602 - L2 LINE L2 -206 3066 2905 1850 181 0 3 chr17 39315917 39316220 -46122260 + AluJb SINE Alu 1 302 -10 2505 85 7 0 chr17 39316220 39316525 -46121955 + AluSg SINE Alu 1 307 -3 365 294 233 45 chr17 39316527 39316698 -46121782 - L2 LINE L2 -495 2819 2681 2435 88 3 0 chr17 39316698 39316995 -46121485 + AluSg SINE Alu 1 298 -12 365 294 233 45 chr17 39316995 39317103 -46121377 - L2 LINE L2 -633 2681 2595 1953 148 0 7 chr17 39317103 39317386 -46121094 + AluJb SINE Alu 1 281 -31 365 294 233 45 chr17 39317386 39317546 -46120934 - L2 LINE L2 -719 2595 2466 1281 168 90 66 chr17 39317546 39317685 -46120795 + MER2 DNA MER2_type 2 136 -208 1536 199 14 20 chr17 39317685 39317982 -46120498 - AluJo SINE Alu -17 295 1 1281 168 90 66 chr17 39317982 39318175 -46120305 + MER2 DNA MER2_type 136 342 -2 365 294 233 45 chr17 39318175 39318484 -46119996 - L2 LINE L2 -848 2466 1928 237 143 14 100 chr17 39318933 39319003 -46119477 + MIR SINE MIR 96 159 -103 1960 169 0 3 chr17 39319006 39319319 -46119161 + AluJb SINE Alu 1 312 0 228 75 0 0 chr17 39319398 39319438 -46119042 - Alu SINE Alu -1 301 262 2547 58 0 3 chr17 39319539 39319833 -46118647 - AluY SINE Alu -18 293 1 25 65 0 0 chr17 39320291 39320337 -46118143 + AT_rich Low_complexity Low_complexity 1 46 0 228 67 0 0 chr17 39322727 39322757 -46115723 + (CAGCC)n Simple_repeat Simple_repeat 3 32 0 1053 117 0 14 chr17 39324523 39324668 -46113812 + FLAM_C SINE Alu 1 143 0 2261 127 0 3 chr17 39325131 39325439 -46113041 + AluSx SINE Alu 1 307 -5 2247 82 7 0 chr17 39325440 39325720 -46112760 + AluSg SINE Alu 22 303 -7 564 328 63 17 chr17 39325856 39326094 -46112386 - MIR SINE MIR -1 261 13 701 160 23 15 chr17 39328503 39328634 -46109846 - FLAM_C SINE Alu 0 133 2 2292 100 3 0 chr17 39328832 39329121 -46109359 + AluSq SINE Alu 1 290 -23 1595 187 20 13 chr17 39329905 39330205 -46108275 + AluSq SINE Alu 1 302 -11 2088 143 7 3 chr17 39330545 39330845 -46107635 - AluSx SINE Alu -10 302 2 1833 138 69 0 chr17 39332280 39332556 -46105924 + AluSg SINE Alu 1 295 -15 186 43 0 0 chr17 39332626 39332649 -46105831 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 1772 159 0 4 chr17 39332649 39332920 -46105560 - AluSx SINE Alu -42 270 1 1662 155 6 73 chr17 39333035 39333214 -46105266 - AluJb SINE Alu -3 309 159 2356 108 3 0 chr17 39333214 39333520 -46104960 - AluSc SINE Alu -2 307 1 1662 155 6 73 chr17 39333520 39333657 -46104823 - AluJb SINE Alu -153 159 14 411 165 216 0 chr17 39333690 39333787 -46104693 - FLAM_A SINE Alu -1 141 24 201 39 0 0 chr17 39333913 39333939 -46104541 + (CA)n Simple_repeat Simple_repeat 2 27 0 201 74 0 0 chr17 39333939 39333966 -46104514 + (TC)n Simple_repeat Simple_repeat 2 28 0 278 353 0 0 chr17 39334751 39334890 -46103590 + (TGG)n Simple_repeat Simple_repeat 1 139 0 1020 181 0 12 chr17 39335324 39335485 -46102995 - AluJo SINE Alu -18 294 134 1595 172 0 15 chr17 39335485 39335753 -46102727 - AluJo SINE Alu -14 298 35 2480 71 3 0 chr17 39335836 39336132 -46102348 + AluSg SINE Alu 1 297 -13 1137 77 14 0 chr17 39336285 39336428 -46102052 - AluSg SINE Alu -148 162 18 1195 134 102 48 chr17 39336445 39336480 -46102000 - Charlie5 DNA MER1_type -45 2579 2547 1736 185 34 0 chr17 39336480 39336778 -46101702 + AluJo SINE Alu 1 308 -4 1195 134 102 48 chr17 39336778 39336803 -46101677 - Charlie5 DNA MER1_type -77 2547 2525 1774 166 10 10 chr17 39336803 39337104 -46101376 - AluJb SINE Alu -11 301 1 1195 134 102 48 chr17 39337104 39337355 -46101125 - Charlie5 DNA MER1_type -99 2525 2250 2348 98 0 0 chr17 39337374 39337690 -46100790 - AluSq SINE Alu 0 313 1 26 50 0 0 chr17 39337720 39337760 -46100720 + AT_rich Low_complexity Low_complexity 1 40 0 701 185 37 0 chr17 39337761 39337896 -46100584 + FLAM_C SINE Alu 2 141 -2 1941 138 10 7 chr17 39337897 39338195 -46100285 - AluSx SINE Alu -13 299 1 196 244 0 0 chr17 39338449 39338494 -46099986 - MIR SINE MIR -110 152 108 1915 131 0 59 chr17 39338633 39338739 -46099741 + AluJo SINE Alu 12 123 -189 2562 57 0 3 chr17 39338739 39339038 -46099442 - AluY SINE Alu -13 298 1 1915 131 0 59 chr17 39339038 39339236 -46099244 + AluJo SINE Alu 123 298 -14 208 321 98 36 chr17 39339420 39339532 -46098948 - MIR SINE MIR -63 145 27 1216 153 205 31 chr17 39339549 39339803 -46098677 - AluJo SINE Alu -12 300 3 448 177 5 177 chr17 39339806 39340015 -46098465 + MER104 DNA MER2_type 5 177 -3 2135 120 3 17 chr17 39340077 39340378 -46098102 - AluSx SINE Alu -15 297 1 225 304 87 9 chr17 39340380 39340495 -46097985 - MIR SINE MIR -65 197 74 2525 73 7 0 chr17 39340504 39340806 -46097674 - AluSp SINE Alu -9 304 1 2014 140 7 13 chr17 39340806 39341106 -46097374 - AluSx SINE Alu -14 298 1 2296 113 3 0 chr17 39341120 39341431 -46097049 - AluSx SINE Alu 0 312 1 495 0 0 0 chr17 39341471 39341526 -46096954 + (TG)n Simple_repeat Simple_repeat 2 56 0 1694 77 3 216 chr17 39341526 39341888 -46096592 - AluSq SINE Alu -28 285 1 570 144 0 0 chr17 39342027 39342117 -46096363 - AluJ/FLAM SINE Alu -210 102 13 231 36 0 0 chr17 39342135 39342163 -46096317 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1154 103 0 0 chr17 39342163 39342309 -46096171 - AluSg/x SINE Alu -33 279 134 2182 96 34 7 chr17 39342309 39342601 -46095879 - AluSc SINE Alu -9 300 1 1139 111 0 69 chr17 39342632 39342821 -46095659 + AluSp SINE Alu 137 312 -1 22 0 0 0 chr17 39342821 39342843 -46095637 + AT_rich Low_complexity Low_complexity 1 22 0 294 339 87 10 chr17 39342994 39343144 -46095336 - MIR SINE MIR -56 206 47 908 74 8 8 chr17 39343460 39343581 -46094899 - AluSp SINE Alu -188 125 5 2486 67 3 3 chr17 39343585 39343884 -46094596 - AluY SINE Alu -8 303 5 2269 91 20 3 chr17 39343888 39344186 -46094294 - AluSx SINE Alu -8 304 2 1109 166 11 0 chr17 39344193 39344374 -46094106 - AluSg/x SINE Alu -13 299 117 827 171 6 6 chr17 39344877 39345035 -46093445 - AluJb SINE Alu -7 305 148 443 168 48 40 chr17 39345070 39345086 -46093394 - FRAM SINE Alu -136 40 26 249 57 0 0 chr17 39345086 39345121 -46093359 + (TTGG)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 39345121 39345229 -46093251 - FRAM SINE Alu -150 26 1 214 322 43 35 chr17 39345271 39345386 -46093094 - L2 LINE L2 -3034 280 165 3261 103 0 4 chr17 39345668 39346152 -46092328 + L1PA8 LINE L1 5668 6149 -23 1088 88 0 6 chr17 39346205 39346386 -46092094 + (GA)n Simple_repeat Simple_repeat 1 180 0 1676 0 0 0 chr17 39346705 39346892 -46091588 - U2 snRNA snRNA -1 187 1 223 316 25 0 chr17 39347901 39347980 -46090500 + L2 LINE L2 3232 3312 -1 304 186 85 119 chr17 39348307 39348425 -46090055 + MER96B DNA MER1_type? 1 114 -303 3283 181 9 32 chr17 39348428 39349104 -46089376 + LTR13 LTR ERVK 1 660 -347 926 177 10 21 chr17 39349254 39349446 -46089034 - LTR13 LTR ERVK -817 190 1 304 186 85 119 chr17 39349449 39349567 -46088913 - MER96B DNA MER1_type? -303 114 1 241 318 54 16 chr17 39349892 39350021 -46088459 - L2 LINE L2 -1 3312 3179 1676 0 0 0 chr17 39350965 39351152 -46087328 + U2 snRNA snRNA 1 187 -1 756 143 18 0 chr17 39351457 39351625 -46086855 + CT-rich Low_complexity Low_complexity 2 172 0 3261 103 0 4 chr17 39351648 39352132 -46086348 - L1PA8 LINE L1 -23 6149 5668 214 322 43 35 chr17 39352416 39352531 -46085949 + L2 LINE L2 165 280 -3034 443 168 48 40 chr17 39352573 39352681 -46085799 + FRAM SINE Alu 1 26 -150 249 57 0 0 chr17 39352681 39352716 -46085764 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 39352716 39352732 -46085748 + FRAM SINE Alu 26 40 0 827 171 6 6 chr17 39352767 39352925 -46085555 + AluJb SINE Alu 148 305 -7 1155 165 0 0 chr17 39353431 39353619 -46084861 + AluSg/x SINE Alu 117 304 -8 2328 68 24 0 chr17 39353620 39353912 -46084568 + AluSx SINE Alu 1 299 -13 2098 92 3 20 chr17 39353922 39354226 -46084254 + AluSp SINE Alu 9 307 -6 494 254 16 0 chr17 39354235 39354361 -46084119 - MER33 DNA MER1_type -194 130 3 4842 163 20 44 chr17 39354519 39355550 -46082930 - LTR13 LTR ERVK 0 1007 1 287 170 94 132 chr17 39355559 39355665 -46082815 + MER96B DNA MER1_type? 310 411 -6 218 248 35 62 chr17 39356234 39356347 -46082133 - L2 LINE L2 -221 3051 2942 848 82 8 16 chr17 39356901 39357023 -46081457 - AluSp SINE Alu -188 125 5 2422 71 3 3 chr17 39357027 39357322 -46081158 - AluY SINE Alu -12 299 5 2253 94 20 3 chr17 39357326 39357624 -46080856 - AluSx SINE Alu -8 304 2 1096 171 11 0 chr17 39357631 39357812 -46080668 - AluSg/x SINE Alu -13 297 115 818 185 158 0 chr17 39358294 39358478 -46080002 - AluJb SINE Alu -13 299 87 2545 90 0 0 chr17 39358559 39358871 -46079609 + AluSp SINE Alu 1 312 -1 2349 94 7 0 chr17 39359898 39360196 -46078284 - AluSp SINE Alu -13 300 1 24 53 0 0 chr17 39360200 39360238 -46078242 + AT_rich Low_complexity Low_complexity 1 38 0 2002 141 3 7 chr17 39360238 39360537 -46077943 + AluSx SINE Alu 1 298 -14 664 200 37 0 chr17 39360538 39360673 -46077807 - FLAM_C SINE Alu -2 141 2 28 48 0 0 chr17 39360674 39360716 -46077764 + AT_rich Low_complexity Low_complexity 1 42 0 2291 193 7 13 chr17 39360773 39361228 -46077252 - LTR13 LTR ERVK -555 452 1 304 186 85 119 chr17 39361231 39361349 -46077131 - MER96B DNA MER1_type? -303 114 1 249 281 31 104 chr17 39361674 39362030 -46076450 - L2 LINE L2 -1 3271 2942 1676 0 0 0 chr17 39362761 39362948 -46075532 + U2 snRNA snRNA 1 187 -1 1052 88 6 0 chr17 39363265 39363436 -46075044 + (TC)n Simple_repeat Simple_repeat 1 172 0 3261 103 0 4 chr17 39363483 39363967 -46074513 - L1PA8 LINE L1 -23 6149 5668 214 322 43 35 chr17 39364250 39364365 -46074115 + L2 LINE L2 165 280 -3034 443 168 48 40 chr17 39364407 39364515 -46073965 + FRAM SINE Alu 1 26 -150 249 57 0 0 chr17 39364515 39364550 -46073930 + (CCAA)n Simple_repeat Simple_repeat 2 36 0 443 168 48 40 chr17 39364550 39364566 -46073914 + FRAM SINE Alu 26 40 0 827 171 6 6 chr17 39364601 39364759 -46073721 + AluJb SINE Alu 148 305 -7 1155 165 0 0 chr17 39365268 39365456 -46073024 + AluSg/x SINE Alu 117 304 -8 2338 68 24 0 chr17 39365457 39365750 -46072730 + AluSx SINE Alu 1 300 -12 2098 92 3 20 chr17 39365760 39366064 -46072416 + AluSp SINE Alu 9 307 -6 494 254 16 0 chr17 39366073 39366199 -46072281 - MER33 DNA MER1_type -194 130 3 3982 173 25 48 chr17 39366357 39367254 -46071226 - LTR13 LTR ERVK 0 1007 132 762 174 0 8 chr17 39368456 39368588 -46069892 + FLAM_A SINE Alu 1 131 -2 224 130 22 0 chr17 39368953 39368999 -46069481 + (TTA)n Simple_repeat Simple_repeat 1 47 0 23 68 0 0 chr17 39369100 39369144 -46069336 + AT_rich Low_complexity Low_complexity 1 44 0 248 298 60 0 chr17 39369456 39369540 -46068940 + L2 LINE L2 2980 3068 -245 210 37 0 0 chr17 39369580 39369607 -46068873 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 862 121 8 0 chr17 39370852 39370984 -46067496 - L1PA16 LINE L1 -9 6157 6025 24 0 0 0 chr17 39371100 39371124 -46067356 + AT_rich Low_complexity Low_complexity 1 24 0 27 0 0 0 chr17 39371583 39371610 -46066870 + AT_rich Low_complexity Low_complexity 1 27 0 251 236 47 95 chr17 39371699 39371847 -46066633 + MIR SINE MIR 66 206 -56 1096 197 139 3 chr17 39371864 39372173 -46066307 - L1ME1 LINE L1 -5 6161 5811 26 30 0 0 chr17 39372173 39372206 -46066274 + AT_rich Low_complexity Low_complexity 1 33 0 2889 17 0 0 chr17 39372253 39372597 -46065883 - L1PA2 LINE L1 -2 6153 5810 266 305 34 62 chr17 39373105 39373282 -46065198 - MIR SINE MIR -15 247 76 287 196 21 113 chr17 39373433 39373487 -46064993 - MER20 DNA MER1_type -47 172 129 1975 68 64 11 chr17 39373487 39373650 -46064830 - AluY SINE Alu -15 296 110 386 20 20 0 chr17 39373650 39373701 -46064779 + (TTTTA)n Simple_repeat Simple_repeat 2 53 0 1975 68 64 11 chr17 39373701 39373818 -46064662 - AluY SINE Alu -201 110 1 287 196 21 113 chr17 39373818 39373860 -46064620 - MER20 DNA MER1_type -90 129 85 29 28 0 0 chr17 39374264 39374300 -46064180 + AT_rich Low_complexity Low_complexity 1 36 0 2352 86 3 0 chr17 39375494 39375786 -46062694 - AluSp SINE Alu -18 295 3 3335 114 106 65 chr17 39376368 39377035 -46061445 - LTR13 LTR ERVK -312 695 1 12770 233 11 5 chr17 39377035 39381448 -46057032 - HERVK13 LTR ERVK 0 8116 3567 32 57 0 0 chr17 39582019 39582072 -45856408 + GC_rich Low_complexity Low_complexity 1 53 0 345 344 76 25 chr17 39582121 39582278 -45856202 - L1MCa LINE L1 -4036 2390 2226 23 33 0 0 chr17 39582956 39582986 -45855494 + GC_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr17 39583998 39584037 -45854443 + (A)n Simple_repeat Simple_repeat 1 39 0 389 240 60 10 chr17 39586093 39586193 -45852287 + MIR3 SINE MIR 101 205 -3 2013 179 89 52 chr17 39586604 39587089 -45851391 - MLT1D LTR MaLR 0 505 3 794 278 60 13 chr17 39587107 39587341 -45851139 - MIR SINE MIR -2 260 16 358 295 35 68 chr17 39587895 39588106 -45850374 + MIR SINE MIR 56 258 -4 227 297 62 55 chr17 39588182 39588310 -45850170 + L2 LINE L2 3136 3264 -8 2000 85 11 7 chr17 39588312 39588621 -45849859 + AluSx SINE Alu 1 310 0 309 51 0 0 chr17 39588857 39588896 -45849584 + (CCG)n Simple_repeat Simple_repeat 1 39 0 916 61 15 23 chr17 39589659 39589791 -45848689 + AluSg SINE Alu 1 131 -179 1233 64 0 0 chr17 39589901 39590057 -45848423 + AluSp/q SINE Alu 158 313 0 310 276 60 43 chr17 39590062 39590178 -45848302 + MIR SINE MIR 32 149 -113 2168 95 0 7 chr17 39590847 39591142 -45847338 + AluSx SINE Alu 1 293 -19 318 291 94 17 chr17 39592003 39592120 -45846360 + MIR SINE MIR 19 144 -64 1657 140 16 63 chr17 39592405 39592586 -45845894 - AluSx SINE Alu -11 301 113 2217 102 7 0 chr17 39592586 39592891 -45845589 - AluSc SINE Alu -2 307 1 189 0 0 0 chr17 39592892 39592913 -45845567 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2143 102 0 0 chr17 39592913 39593196 -45845284 - AluSx SINE Alu -29 283 1 1657 140 16 63 chr17 39593196 39593326 -45845154 - AluSx SINE Alu -197 115 2 824 263 33 4 chr17 39594062 39594294 -45844186 - MIR SINE MIR -11 251 10 335 62 0 0 chr17 39595674 39595722 -45842758 - L1PA8A LINE L1 -343 5788 5741 1241 162 10 0 chr17 39595723 39595950 -45842530 - AluJo SINE Alu 0 312 83 633 320 101 35 chr17 39595950 39596263 -45842217 + L2 LINE L2 2349 2692 -622 2280 93 0 13 chr17 39596263 39596573 -45841907 - AluSg SINE Alu -4 306 1 633 320 101 35 chr17 39596573 39596634 -45841846 + L2 LINE L2 2692 2748 -566 273 262 48 24 chr17 39596640 39596766 -45841714 + L1MB8 LINE L1 5950 6078 -100 455 325 97 50 chr17 39596775 39596885 -45841595 + L2 LINE L2 2827 2930 -383 1704 108 12 4 chr17 39596885 39597134 -45841346 - AluSq SINE Alu -10 303 53 455 325 97 50 chr17 39597134 39597488 -45840992 + L2 LINE L2 2930 3313 0 1958 110 7 20 chr17 39598211 39598496 -45839984 + AluSx SINE Alu 1 283 -29 264 30 0 0 chr17 39598496 39598529 -45839951 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 1958 110 7 20 chr17 39598529 39598543 -45839937 + AluSx SINE Alu 283 296 -16 564 236 177 0 chr17 39598663 39598866 -45839614 + L2 LINE L2 2477 2715 -599 2008 143 0 19 chr17 39598906 39599221 -45839259 + AluSx SINE Alu 1 309 -3 1921 164 7 0 chr17 39599232 39599542 -45838938 + AluSx SINE Alu 1 312 0 1560 208 14 0 chr17 39599552 39599841 -45838639 + AluJb SINE Alu 1 293 -19 2250 91 7 0 chr17 39599847 39600155 -45838325 + AluSp SINE Alu 1 310 -3 402 143 23 160 chr17 39600178 39600251 -45838229 - L1MB8 LINE L1 -53 6125 6044 2228 110 0 0 chr17 39600251 39600551 -45837929 - AluSg SINE Alu -6 304 5 1911 137 65 0 chr17 39600561 39600854 -45837626 - AluSx SINE Alu 0 312 1 402 143 23 160 chr17 39600854 39600944 -45837536 - L1MB8 LINE L1 -144 6034 5975 971 271 176 21 chr17 39600946 39601284 -45837196 + L2 LINE L2 2689 2974 -339 1639 153 3 46 chr17 39601284 39601610 -45836870 - AluSx SINE Alu 0 312 1 971 271 176 21 chr17 39601610 39601823 -45836657 + L2 LINE L2 2974 3313 0 712 157 9 9 chr17 39602033 39602148 -45836332 + FLAM_A SINE Alu 12 126 -16 2300 110 0 0 chr17 39602348 39602656 -45835824 - AluSc SINE Alu 0 309 2 338 261 61 43 chr17 39602991 39603106 -45835374 + MIR SINE MIR 97 213 -49 23 33 0 0 chr17 39603106 39603136 -45835344 + AT_rich Low_complexity Low_complexity 1 30 0 2441 67 0 0 chr17 39603142 39603439 -45835041 + AluY SINE Alu 1 297 -14 234 62 0 0 chr17 39603474 39603506 -45834974 + (ATG)n Simple_repeat Simple_repeat 2 33 0 1954 141 3 0 chr17 39603508 39603799 -45834681 - AluSx SINE Alu -20 292 1 236 385 30 18 chr17 39603885 39604052 -45834428 + L2 LINE L2 2593 2761 -553 772 260 48 0 chr17 39604052 39604260 -45834220 + MIR SINE MIR 1 218 -44 364 312 52 76 chr17 39604405 39604598 -45833882 + L2 LINE L2 2825 3012 -260 2268 107 3 0 chr17 39604598 39604908 -45833572 + AluSx SINE Alu 2 312 0 364 312 52 76 chr17 39604908 39604964 -45833516 + L2 LINE L2 3012 3068 -204 1053 281 0 16 chr17 39604990 39605246 -45833234 + MIR SINE MIR 10 261 -1 246 323 73 48 chr17 39605284 39605408 -45833072 + L2 LINE L2 3124 3250 -22 590 299 37 11 chr17 39605434 39605621 -45832859 - MIR SINE MIR -21 241 50 267 222 133 22 chr17 39605616 39605706 -45832774 + MIR SINE MIR 106 205 -57 * 1698 103 9 0 chr17 39606307 39606540 -45831940 + L1PA10 LINE L1 5924 6158 -10 2061 125 0 3 chr17 39606651 39606977 -45831503 - AluSx SINE Alu 0 312 1 240 379 0 11 chr17 39607131 39607226 -45831254 - MIR SINE MIR -1 261 168 193 119 48 0 chr17 39607237 39607279 -45831201 + (TAA)n Simple_repeat Simple_repeat 1 44 0 212 259 99 25 chr17 39607348 39607429 -45831051 - MIR SINE MIR -101 107 21 234 0 0 0 chr17 39609076 39609102 -45829378 + (A)n Simple_repeat Simple_repeat 1 26 0 234 333 13 22 chr17 39609249 39609390 -45829090 + GA-rich Low_complexity Low_complexity 1 229 0 247 243 0 29 chr17 39609774 39609844 -45828636 + GA-rich Low_complexity Low_complexity 2 69 0 1984 155 3 3 chr17 39609924 39610234 -45828246 + AluJb SINE Alu 1 310 -2 378 298 53 8 chr17 39610260 39610391 -45828089 + MIR SINE MIR 116 252 -10 2381 94 3 0 chr17 39610446 39610755 -45827725 - AluSp SINE Alu -3 310 1 262 194 41 10 chr17 39611473 39611571 -45826909 + GA-rich Low_complexity Low_complexity 1 101 0 236 288 30 0 chr17 39612213 39612279 -45826201 + L2 LINE L2 3205 3272 0 248 220 0 0 chr17 39613641 39613700 -45824780 + (CAGA)n Simple_repeat Simple_repeat 2 60 0 270 0 0 0 chr17 39619343 39619373 -45819107 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 21 0 0 0 chr17 39620501 39620522 -45817958 + GC_rich Low_complexity Low_complexity 1 21 0 28 19 0 56 chr17 39620549 39620603 -45817877 + GC_rich Low_complexity Low_complexity 1 51 0 334 291 34 83 chr17 39620664 39620835 -45817645 - L1MCa LINE L1 -2862 3564 2226 21 36 0 0 chr17 39621359 39621387 -45817093 + GC_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr17 39621836 39621868 -45816612 + GC_rich Low_complexity Low_complexity 1 32 0 222 192 0 0 chr17 39622341 39622393 -45816087 + CT-rich Low_complexity Low_complexity 3 54 0 22 0 0 0 chr17 39623051 39623073 -45815407 + GC_rich Low_complexity Low_complexity 1 22 0 212 221 0 15 chr17 39623744 39623812 -45814668 + GA-rich Low_complexity Low_complexity 1 67 0 211 133 0 22 chr17 39624086 39624131 -45814349 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 333 186 0 0 chr17 39625151 39625221 -45813259 + (CA)n Simple_repeat Simple_repeat 2 71 0 218 303 169 0 chr17 39625412 39625501 -45812979 - L2 LINE L2 -2 3311 3208 373 278 125 7 chr17 39625674 39625818 -45812662 - MIR3 SINE MIR -24 184 24 2490 47 0 0 chr17 39626200 39626496 -45811984 + AluY SINE Alu 1 296 -15 1902 155 0 0 chr17 39626501 39626798 -45811682 + AluJb SINE Alu 1 297 -15 456 225 25 8 chr17 39626800 39626920 -45811560 + MIR SINE MIR 80 201 -61 213 238 0 0 chr17 39627066 39627108 -45811372 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 188 81 0 27 chr17 39629264 39629301 -45809179 + L2 LINE L2 3028 3063 -209 263 68 0 23 chr17 39629407 39629451 -45809029 + FAM SINE Alu 131 173 -2 197 306 16 0 chr17 39629524 39629586 -45808894 + L2 LINE L2 3248 3310 -3 2386 63 0 3 chr17 39630086 39630386 -45808094 - AluSp SINE Alu -14 299 1 184 147 29 0 chr17 39630976 39631010 -45807470 + MIR SINE MIR 120 154 -108 2070 141 3 0 chr17 39631097 39631403 -45807077 - AluSx SINE Alu -5 307 1 262 264 109 23 chr17 39631529 39631655 -45806825 + MIR SINE MIR 23 151 -63 250 33 0 0 chr17 39632202 39632232 -45806248 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 1997 100 14 0 chr17 39632232 39632511 -45805969 - AluSx SINE Alu -1 312 1 832 159 0 8 chr17 39632512 39632644 -45805836 - FLAM_A SINE Alu -2 131 1 490 200 50 0 chr17 39632713 39632813 -45805667 - MIR SINE MIR -60 148 44 664 223 101 42 chr17 39632882 39633120 -45805360 - MIR SINE MIR 0 262 11 205 339 45 9 chr17 39633380 39633492 -45804988 + L2 LINE L2 2944 3059 -213 217 348 116 14 chr17 39633535 39633673 -45804807 + MIR SINE MIR 32 183 -79 24 67 0 0 chr17 39633782 39633827 -45804653 + GC_rich Low_complexity Low_complexity 1 45 0 33 0 0 0 chr17 39633986 39634019 -45804461 + GC_rich Low_complexity Low_complexity 1 33 0 185 56 0 56 chr17 39634160 39634196 -45804284 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 625 285 32 0 chr17 39635555 39635713 -45802767 - MIR SINE MIR -80 182 20 548 346 51 0 chr17 39635734 39635951 -45802529 - MIR SINE MIR -7 255 28 2306 99 0 3 chr17 39636313 39636616 -45801864 + AluSq SINE Alu 1 302 -11 486 262 141 37 chr17 39636754 39636945 -45801535 - MIR SINE MIR 0 262 52 370 250 293 21 chr17 39638289 39638477 -45800003 + MIR SINE MIR 13 251 -11 2073 117 0 28 chr17 39638607 39638924 -45799556 + AluJb SINE Alu 1 308 -4 447 252 77 0 chr17 39638982 39639137 -45799343 + L1ME3 LINE L1 5988 6154 -8 235 262 16 0 chr17 39639184 39639245 -45799235 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 372 265 157 24 chr17 39639690 39639856 -45798624 - MIR SINE MIR -54 208 21 336 259 11 63 chr17 39640636 39640825 -45797655 + CT-rich Low_complexity Low_complexity 2 180 0 219 246 18 0 chr17 39642969 39643026 -45795454 + GA-rich Low_complexity Low_complexity 2 59 0 525 286 45 30 chr17 39644876 39645075 -45793405 + MIR3 SINE MIR 7 208 0 268 302 66 19 chr17 39646513 39646619 -45791861 - L2 LINE L2 -3 3269 3159 1778 154 0 47 chr17 39646642 39646788 -45791692 + AluJo SINE Alu 1 152 -160 2345 84 3 0 chr17 39646788 39647085 -45791395 + AluSp SINE Alu 1 298 -15 1778 154 0 47 chr17 39647085 39647257 -45791223 + AluJo SINE Alu 152 304 -8 240 185 0 0 chr17 39649996 39650050 -45788430 + GA-rich Low_complexity Low_complexity 3 56 0 2147 135 0 0 chr17 39650915 39651226 -45787254 + AluSx SINE Alu 1 311 -1 212 268 56 28 chr17 39651413 39651484 -45786996 - MIR SINE MIR -92 116 44 396 367 226 14 chr17 39653855 39654405 -45784075 + L2 LINE L2 2154 2819 -495 691 232 179 0 chr17 39654643 39654850 -45783630 + MIR SINE MIR 6 249 -13 1270 211 124 0 chr17 39654863 39655129 -45783351 + AluJo SINE Alu 3 301 -1 384 332 61 70 chr17 39655787 39656130 -45782350 + L2 LINE L2 2928 3267 -5 340 243 84 19 chr17 39656241 39656348 -45782132 - MIR SINE MIR -62 146 33 251 200 0 0 chr17 39657078 39657123 -45781357 + AluYb8 SINE Alu 134 178 -130 942 103 37 0 chr17 39657334 39657470 -45781010 + FAM SINE Alu 32 172 -13 526 259 44 7 chr17 39657639 39657774 -45780706 - MIR SINE MIR -50 212 73 186 346 153 30 chr17 39658001 39658203 -45780277 - L2 LINE L2 -209 3063 2837 1376 222 168 13 chr17 39658532 39659236 -45779244 - L2 LINE L2 -19 3294 2482 580 263 115 0 chr17 39659798 39660021 -45778459 - MIR SINE MIR 0 262 16 309 286 53 70 chr17 39660382 39660553 -45777927 - MIR SINE MIR -18 244 77 1653 103 34 89 chr17 39660578 39660870 -45777610 + AluJo SINE Alu 24 299 -13 361 294 29 0 chr17 39661292 39661394 -45777086 - MIR SINE MIR -119 143 39 1871 129 0 7 chr17 39661466 39661744 -45776736 - AluSx SINE Alu -7 305 30 406 259 65 77 chr17 39661856 39661884 -45776596 - MIR SINE MIR -88 174 147 2206 123 3 0 chr17 39661884 39662192 -45776288 - AluSx SINE Alu -3 309 1 313 105 0 35 chr17 39662200 39662249 -45776231 - L1MB4 LINE L1 0 6180 6132 1822 171 3 0 chr17 39662249 39662553 -45775927 - AluJb SINE Alu -7 305 1 406 259 65 77 chr17 39662560 39662692 -45775788 - MIR SINE MIR -122 140 7 2329 74 3 0 chr17 39662921 39663220 -45775260 + AluSc SINE Alu 2 301 -8 1840 137 13 43 chr17 39663863 39664004 -45774476 + AluJo SINE Alu 1 145 -167 2432 60 0 13 chr17 39664004 39664318 -45774162 + AluY SINE Alu 1 310 -1 1840 137 13 43 chr17 39664318 39664475 -45774005 + AluJo SINE Alu 145 290 -22 281 324 90 0 chr17 39664515 39664626 -45773854 - MIR SINE MIR -72 136 16 283 292 11 34 chr17 39664915 39665093 -45773387 + GA-rich Low_complexity Low_complexity 1 174 0 1484 221 107 16 chr17 39665156 39665585 -45772895 + L1MC4a LINE L1 5481 5960 -1848 2313 106 3 0 chr17 39665585 39665896 -45772584 + AluSx SINE Alu 1 312 0 1484 221 107 16 chr17 39665896 39665950 -45772530 + L1MC4a LINE L1 5960 6008 -1800 503 145 0 0 chr17 39665964 39666040 -45772440 + AluJ/FLAM SINE Alu 15 90 -222 1367 217 94 8 chr17 39666067 39666449 -45772031 + MLT1C LTR MaLR 1 415 -52 1904 131 3 23 chr17 39666525 39666830 -45771650 + AluJo SINE Alu 1 299 -13 2239 73 3 20 chr17 39667567 39667867 -45770613 - AluY SINE Alu -16 295 1 294 241 8 0 chr17 39668048 39668118 -45770362 + MIR SINE MIR 91 148 -60 862 300 166 13 chr17 39668279 39668929 -45769551 - L2 LINE L2 0 3313 2553 279 340 34 48 chr17 39669890 39670037 -45768443 - MIR SINE MIR -116 146 2 351 96 0 0 chr17 39670146 39670198 -45768282 + (TTCA)n Simple_repeat Simple_repeat 1 52 0 215 209 0 0 chr17 39670199 39670242 -45768238 - L2 LINE L2 -14 3258 3216 982 196 0 0 chr17 39670253 39670421 -45768059 + FRAM SINE Alu 1 166 -10 1888 164 7 0 chr17 39671178 39671483 -45766997 - AluJo SINE Alu -5 307 1 187 339 0 0 chr17 39671816 39671872 -45766608 - MIR SINE MIR -125 83 28 2282 97 0 3 chr17 39673242 39673540 -45764940 + AluSx SINE Alu 1 297 -15 260 340 48 34 chr17 39676588 39676735 -45761745 + MIR SINE MIR 100 248 -14 242 306 74 16 chr17 39677668 39677789 -45760691 + MIR SINE MIR 18 145 -63 225 186 0 0 chr17 39677973 39678016 -45760464 + L3 LINE CR1 1420 1462 -115 22 0 0 0 chr17 39679465 39679487 -45758993 + AT_rich Low_complexity Low_complexity 1 22 0 216 200 18 0 chr17 39679978 39680033 -45758447 + (CCTG)n Simple_repeat Simple_repeat 4 59 0 358 279 184 7 chr17 39680069 39680216 -45758264 + MIR SINE MIR 56 228 -34 422 260 93 20 chr17 39680473 39680623 -45757857 - MIR3 SINE MIR -14 194 34 200 257 28 83 chr17 39684142 39684251 -45754229 + G-rich Low_complexity Low_complexity 6 108 0 2291 87 6 6 chr17 39685061 39685373 -45753107 - AluSp SINE Alu -1 312 1 216 287 86 0 chr17 39685384 39685486 -45752994 - MIR SINE MIR -67 141 20 392 244 0 39 chr17 39687290 39687418 -45751062 - L1MC4 LINE L1 -1339 6983 1995 255 358 70 26 chr17 39687423 39687652 -45750828 - L2 LINE L2 -612 2702 2464 312 27 0 0 chr17 39688763 39688800 -45749680 + (CA)n Simple_repeat Simple_repeat 1 37 0 447 265 103 49 chr17 39689610 39689814 -45748666 + MIR SINE MIR 34 248 -14 2424 77 3 3 chr17 39690384 39690697 -45747783 - AluSp SINE Alu 0 313 1 2068 149 3 0 chr17 39690725 39691033 -45747447 - AluSg SINE Alu -1 309 1 462 118 13 0 chr17 39691033 39691109 -45747371 + MER69 DNA AcHobo 2448 2524 -2 606 249 87 65 chr17 39691129 39691302 -45747178 - MIR SINE MIR -12 250 69 2427 67 0 0 chr17 39691302 39691600 -45746880 - AluY SINE Alu -13 298 1 606 249 87 65 chr17 39691600 39691655 -45746825 - MIR SINE MIR -193 69 17 536 71 10 31 chr17 39691890 39691988 -45746492 + MER53 DNA DNA 5 100 -89 475 102 71 0 chr17 39691908 39692006 -45746474 - MER53 DNA DNA -12 177 73 * 2091 118 0 3 chr17 39692219 39692516 -45745964 + AluSp SINE Alu 1 296 -17 189 74 0 0 chr17 39693035 39693062 -45745418 + (GGA)n Simple_repeat Simple_repeat 3 29 0 22 80 0 0 chr17 39693180 39693230 -45745250 + GC_rich Low_complexity Low_complexity 1 50 0 443 257 176 45 chr17 39694246 39694468 -45744012 - MIR SINE MIR -1 261 11 1198 154 30 5 chr17 39695148 39695349 -45743131 + AluJb SINE Alu 86 291 -21 347 283 246 0 chr17 39695768 39695906 -45742574 - MIR SINE MIR -13 249 78 219 333 53 0 chr17 39696715 39696790 -45741690 - MIR SINE MIR -151 111 33 225 94 0 0 chr17 39697151 39697183 -45741297 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2135 93 7 0 chr17 39697335 39697625 -45740855 + AluSg SINE Alu 1 292 -18 364 330 168 10 chr17 39698005 39698214 -45740266 + MIR SINE MIR 2 243 -19 340 278 60 30 chr17 39700427 39700560 -45737920 + MIR SINE MIR 16 152 -56 2343 75 3 3 chr17 39700688 39700983 -45737497 + AluSp SINE Alu 1 295 -18 246 367 0 0 chr17 39700988 39701067 -45737413 - MIR3 SINE MIR -41 167 89 286 188 72 0 chr17 39701554 39701623 -45736857 - MER91A DNA MER1_type 0 196 123 338 338 88 14 chr17 39701651 39701799 -45736681 - MER91A DNA MER1_type -37 159 1 520 311 49 15 chr17 39701801 39702004 -45736476 - MIR SINE MIR -24 238 34 1068 238 70 0 chr17 39703613 39703857 -45734623 + MIR SINE MIR 2 262 0 1902 130 38 0 chr17 39703877 39704169 -45734311 - AluSq SINE Alu -8 305 3 2028 137 7 0 chr17 39704171 39704463 -45734017 - AluSx SINE Alu -18 294 1 610 295 119 1 chr17 39704582 39704811 -45733669 + MIR SINE MIR 10 262 0 1704 243 26 0 chr17 39705672 39706092 -45732388 + L1ME2 LINE L1 5697 6127 -37 2270 109 0 0 chr17 39706092 39706396 -45732084 - AluSc SINE Alu -5 304 1 596 103 0 0 chr17 39706415 39706493 -45731987 - AluS SINE Alu -234 78 1 1339 107 0 0 chr17 39706504 39706711 -45731769 - AluSg/x SINE Alu 0 312 114 653 157 0 0 chr17 39706711 39706813 -45731667 + AluJo/FRAM SINE Alu 194 295 -17 1857 124 8 53 chr17 39706813 39707168 -45731312 - Tigger2a DNA MER2_type -95 339 1 1842 164 6 6 chr17 39707209 39707520 -45730960 - AluSx SINE Alu -1 311 1 2142 87 10 7 chr17 39707593 39707891 -45730589 + AluSp SINE Alu 1 299 -14 1367 119 5 5 chr17 39708143 39708337 -45730143 + AluSp SINE Alu 1 194 -119 525 120 0 0 chr17 39708338 39708430 -45730050 + (TA)n Simple_repeat Simple_repeat 2 93 0 409 286 18 65 chr17 39708432 39708692 -45729788 - L1MC4a LINE L1 -1949 5859 5611 249 33 0 0 chr17 39708692 39708722 -45729758 + (TG)n Simple_repeat Simple_repeat 2 31 0 409 286 18 65 chr17 39708722 39708737 -45729743 - L1MC4a LINE L1 -2197 5611 5597 2104 108 0 10 chr17 39708739 39709035 -45729445 - AluSc SINE Alu -16 293 1 194 239 209 0 chr17 39709097 39709164 -45729316 + L2 LINE L2 3186 3266 -6 548 44 0 0 chr17 39709244 39709312 -45729168 - AluSp/q SINE Alu -14 299 232 809 98 0 9 chr17 39709313 39709425 -45729055 - AluSp SINE Alu -202 111 1 233 275 88 0 chr17 39709447 39709527 -45728953 + L2 LINE L2 3227 3313 0 1755 171 3 3 chr17 39709911 39710203 -45728277 + AluJb SINE Alu 1 292 -20 2251 79 26 3 chr17 39710368 39710672 -45727808 - AluSp SINE Alu -2 311 1 271 248 71 97 chr17 39711450 39711563 -45726917 - L2 LINE L2 -1 3312 3203 584 279 165 25 chr17 39711671 39711993 -45726487 - L2 LINE L2 -436 2878 2512 580 268 154 5 chr17 39712946 39713166 -45725314 - MIR SINE MIR -3 259 7 181 269 19 0 chr17 39713170 39713222 -45725258 - L2 LINE L2 -346 2967 2915 1442 163 57 0 chr17 39713494 39713739 -45724741 + AluJb SINE Alu 46 304 -8 2116 107 13 0 chr17 39713740 39714040 -45724440 + AluSp SINE Alu 2 305 -8 2131 103 10 3 chr17 39714275 39714575 -45723905 + AluSx SINE Alu 1 302 -10 1949 157 0 7 chr17 39714576 39714882 -45723598 + AluJb SINE Alu 1 304 -8 1034 143 70 105 chr17 39715149 39715407 -45723073 + MIR SINE MIR 14 262 0 299 246 106 91 chr17 39715429 39715566 -45722914 - L1ME LINE L1 -346 5775 5633 2387 80 0 0 chr17 39715566 39715868 -45722612 - AluSc SINE Alu -5 304 3 299 246 106 91 chr17 39715868 39715929 -45722551 - L1ME LINE L1 -488 5633 5574 266 272 130 0 chr17 39717716 39717808 -45720672 + MIR SINE MIR 118 221 -41 368 264 76 103 chr17 39718380 39718591 -45719889 - L1ME4a LINE L1 0 6823 6608 279 0 0 0 chr17 39718591 39718622 -45719858 + (CA)n Simple_repeat Simple_repeat 2 32 0 1926 137 7 0 chr17 39718628 39718912 -45719568 - AluSx SINE Alu -26 286 1 368 264 76 103 chr17 39718912 39719061 -45719419 - L1ME4a LINE L1 -220 6603 1765 1129 126 0 0 chr17 39719318 39719469 -45719011 + AluSx SINE Alu 3 153 -159 301 290 114 98 chr17 39719469 39719724 -45718756 - L1MC4a LINE L1 -1911 5897 5639 2301 101 3 0 chr17 39719779 39720087 -45718393 + AluSq SINE Alu 1 309 -4 280 238 12 38 chr17 39720449 39720529 -45717951 + MIR SINE MIR 111 188 -74 194 288 0 0 chr17 39720987 39721046 -45717434 - L2 LINE L2 -223 3049 2991 183 313 0 0 chr17 39721325 39721373 -45717107 - MIR SINE MIR -6 256 209 2250 98 0 0 chr17 39721450 39721747 -45716733 - AluSc SINE Alu -12 297 1 1512 153 55 25 chr17 39721773 39722048 -45716432 - AluJb SINE Alu -28 284 2 2207 99 3 29 chr17 39722059 39722372 -45716108 - AluSx SINE Alu -6 306 2 213 333 0 0 chr17 39722401 39722479 -45716001 - L2 LINE L2 -298 2974 2897 208 238 244 24 chr17 39722474 39722569 -45715911 + MER5B DNA MER1_type 12 136 -53 * 1306 160 142 59 chr17 39722574 39722684 -45715796 + MER47A DNA MER2_type 1 100 -2223 1722 137 4 0 chr17 39722684 39722975 -45715505 - AluSp SINE Alu 0 313 43 1306 160 142 59 chr17 39722975 39723020 -45715460 + MER47A DNA MER2_type 100 140 -2183 1789 171 10 0 chr17 39723020 39723325 -45715155 + AluJo SINE Alu 1 308 -4 1306 160 142 59 chr17 39723325 39723506 -45714974 + MER47A DNA MER2_type 140 366 0 1910 96 31 34 chr17 39723528 39723819 -45714661 - AluSg SINE Alu -18 292 3 1371 106 45 0 chr17 39724927 39725071 -45713409 - AluSg/x SINE Alu -22 288 131 2181 81 39 0 chr17 39725071 39725356 -45713124 - AluSg SINE Alu -14 296 1 1371 106 45 0 chr17 39725356 39725409 -45713071 - AluSg/x SINE Alu -179 131 82 1963 136 9 25 chr17 39726850 39727167 -45711313 + AluJo SINE Alu 1 312 0 340 393 25 5 chr17 39731567 39731768 -45706712 + MIR SINE MIR 9 213 -49 795 222 127 0 chr17 39733918 39734107 -45704373 + MIR SINE MIR 18 230 -32 354 326 35 7 chr17 39734310 39734454 -45704026 + MIR SINE MIR 36 183 -79 216 399 52 0 chr17 39735383 39735556 -45702924 - L3b LINE CR1 -141 1442 1261 2272 100 33 0 chr17 39736217 39736517 -45701963 - AluSx SINE Alu -2 310 1 377 280 180 45 chr17 39737452 39737652 -45700828 + MIR SINE MIR 7 233 -29 378 296 68 6 chr17 39737943 39738119 -45700361 + L2 LINE L2 2020 2206 -1108 1806 148 7 39 chr17 39738130 39738435 -45700045 - AluJb SINE Alu -17 295 1 712 266 93 13 chr17 39738516 39738668 -45699812 + MIR SINE MIR 2 140 -122 1335 168 133 38 chr17 39738668 39738782 -45699698 + LTR54B LTR ERV1 2 104 -394 2239 104 3 0 chr17 39738782 39739071 -45699409 - AluSp SINE Alu -17 296 7 1335 168 133 38 chr17 39739071 39739208 -45699272 + LTR54B LTR ERV1 104 227 -271 2633 63 0 19 chr17 39739208 39739525 -45698955 + AluY SINE Alu 1 311 0 1335 168 133 38 chr17 39739525 39739725 -45698755 + LTR54B LTR ERV1 227 497 -1 712 266 93 13 chr17 39739725 39739809 -45698671 + MIR SINE MIR 140 257 -5 327 258 115 53 chr17 39739839 39740048 -45698432 + L2 LINE L2 2523 2744 -570 2184 104 4 0 chr17 39740066 39740374 -45698106 + AluSg SINE Alu 1 309 0 244 146 146 0 chr17 39740771 39740819 -45697661 + L2 LINE L2 3237 3291 -22 2443 93 3 3 chr17 39741113 39741423 -45697057 + AluSx SINE Alu 2 311 -1 2221 107 0 46 chr17 39742465 39742791 -45695689 + AluY SINE Alu 1 311 0 2270 104 10 0 chr17 39743525 39743824 -45694656 - AluSp SINE Alu -10 303 2 1510 163 57 0 chr17 39743825 39744070 -45694410 - AluJb SINE Alu -8 304 46 567 264 154 5 chr17 39744398 39744618 -45693862 + MIR SINE MIR 7 259 -3 549 276 165 25 chr17 39745572 39745894 -45692586 + L2 LINE L2 2512 2878 -436 256 221 77 96 chr17 39746011 39746115 -45692365 + L2 LINE L2 3170 3271 -1 2413 84 3 3 chr17 39746893 39747191 -45691289 + AluSp SINE Alu 1 298 -15 684 251 79 20 chr17 39747271 39747474 -45691006 - MER58C DNA MER1_type 0 215 1 1439 168 4 22 chr17 39747638 39747870 -45690610 + AluJo SINE Alu 6 233 -79 263 122 0 0 chr17 39747871 39747912 -45690568 - MADE1 DNA Mariner -38 42 2 * 395 160 27 0 chr17 39747912 39747975 -45690505 + AluJo SINE Alu 233 297 -5 1477 194 48 31 chr17 39748079 39748373 -45690107 - AluJo SINE Alu -13 299 1 730 206 0 0 chr17 39748421 39748552 -45689928 + FLAM_A SINE Alu 1 131 -2 1103 144 5 0 chr17 39748674 39750167 -45688313 + ALR/Alpha Satellite centromeric 1 1500 -48 1140 156 7 1 chr17 39751382 39760827 -45677653 + ALR/Alpha Satellite centromeric 1 9509 -24 280 81 0 0 chr17 39760927 39760964 -45677516 - Alu SINE Alu -262 41 5 378 289 86 10 chr17 39761031 39761228 -45677252 + L1ME1 LINE L1 5879 6090 -76 279 286 143 17 chr17 39761373 39761492 -45676988 - L2 LINE L2 0 3272 3139 1932 151 3 24 chr17 39761559 39761857 -45676623 - AluJb SINE Alu -20 292 1 2012 151 3 3 chr17 39762550 39762861 -45675619 - AluJo SINE Alu -1 311 1 289 295 10 19 chr17 39763938 39764062 -45674418 - MIR SINE MIR -72 136 36 1779 130 45 55 chr17 39764443 39764751 -45673729 - AluJb SINE Alu -7 305 1 236 177 81 16 chr17 39764795 39764857 -45673623 - MIR SINE MIR -61 147 82 328 239 137 17 chr17 39766324 39766441 -45672039 - MIR SINE MIR -62 146 16 189 107 0 0 chr17 39766441 39766469 -45672011 + (T)n Simple_repeat Simple_repeat 1 28 0 1863 88 42 0 chr17 39766469 39766707 -45671773 - AluSq SINE Alu -65 248 1 257 279 72 45 chr17 39767913 39768024 -45670456 - MIR3 SINE MIR -6 202 89 2638 128 7 24 chr17 39768079 39768531 -45669949 - L1MB7 LINE L1 -20 6164 5721 180 196 39 20 chr17 39769503 39769554 -45668926 - MIR SINE MIR -10 252 201 2362 99 0 0 chr17 39769601 39769893 -45668587 + AluSc SINE Alu 1 292 -17 215 59 0 29 chr17 39770773 39770807 -45667673 + (TG)n Simple_repeat Simple_repeat 2 34 0 572 218 115 6 chr17 39770807 39770956 -45667524 - FRAM SINE Alu -143 169 1 22 0 0 0 chr17 39772025 39772047 -45666433 + AT_rich Low_complexity Low_complexity 1 22 0 186 147 88 0 chr17 39775106 39775140 -45663340 - MIR SINE MIR -26 236 200 2525 76 3 0 chr17 39775953 39776255 -45662225 - AluSq SINE Alu -10 303 1 207 0 0 0 chr17 39776261 39776284 -45662196 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1019 76 0 0 chr17 39776284 39776403 -45662077 - AluSq/x SINE Alu -191 121 3 225 0 0 0 chr17 39776717 39776742 -45661738 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 120 0 0 chr17 39778600 39778900 -45659580 - AluSx SINE Alu -12 300 1 490 301 96 13 chr17 39779231 39779470 -45659010 - L2 LINE L2 0 3272 3014 422 254 121 6 chr17 39779682 39779847 -45658633 + MER5A DNA MER1_type 3 186 -3 543 306 48 48 chr17 39779988 39780223 -45658257 + L1ME1 LINE L1 5875 6112 -54 2246 109 3 3 chr17 39780223 39780525 -45657955 + AluSg SINE Alu 1 302 -8 543 306 48 48 chr17 39780525 39780580 -45657900 + L1ME1 LINE L1 6111 6165 -1 2229 119 0 16 chr17 39780595 39780906 -45657574 + AluSg SINE Alu 1 306 -4 1526 215 20 18 chr17 39780912 39781312 -45657168 + L1M4 LINE L1 4794 5194 -952 2248 93 0 66 chr17 39781320 39781653 -45656827 + AluSp SINE Alu 1 311 -2 1879 189 0 3 chr17 39781659 39781961 -45656519 + AluJb SINE Alu 1 301 -11 1424 169 4 35 chr17 39781964 39782219 -45656261 + AluSx SINE Alu 1 247 -65 2384 92 7 0 chr17 39782319 39782623 -45655857 - AluSp SINE Alu -7 306 1 195 129 0 0 chr17 39782823 39782854 -45655626 + (A)n Simple_repeat Simple_repeat 1 31 0 1208 191 47 0 chr17 39784882 39785097 -45653383 - AluJo SINE Alu -9 303 79 2604 71 3 0 chr17 39785191 39785501 -45652979 - AluSp SINE Alu -2 311 1 610 294 20 7 chr17 39785959 39786105 -45652375 + MIR3 SINE MIR 16 163 -45 22 0 0 0 chr17 39786521 39786543 -45651937 + AT_rich Low_complexity Low_complexity 1 22 0 392 194 19 0 chr17 39786688 39786796 -45651684 + CT-rich Low_complexity Low_complexity 2 111 0 185 214 95 48 chr17 39787958 39788042 -45650438 - MIR SINE MIR -67 141 54 1988 142 38 0 chr17 39788151 39788439 -45650041 + AluSx SINE Alu 1 299 -13 244 307 121 52 chr17 39788955 39789186 -45649294 + L2 LINE L2 2691 2937 -377 1944 164 0 26 chr17 39789218 39789529 -45648951 + AluJb SINE Alu 1 303 -9 226 204 61 0 chr17 39789904 39789953 -45648527 - MIR SINE MIR -17 245 194 308 305 91 1 chr17 39790143 39790281 -45648199 + MIR SINE MIR 25 172 -64 1323 121 0 0 chr17 39790284 39790457 -45648023 + AluSg/x SINE Alu 125 297 -15 195 320 40 13 chr17 39790481 39790556 -45647924 + MIR SINE MIR 186 262 0 1227 242 91 18 chr17 39792118 39792503 -45645977 - MER113 DNA MER1_type? 0 521 109 753 243 159 4 chr17 39792541 39792767 -45645713 - MIR SINE MIR 0 262 2 2014 110 43 4 chr17 39793205 39793486 -45644994 - AluJb SINE Alu -20 292 1 606 77 0 0 chr17 39796781 39796859 -45641621 - AluJ/FRAM SINE Alu -9 303 226 2456 86 0 0 chr17 39797745 39798049 -45640431 - AluSx SINE Alu -8 304 1 2304 76 3 3 chr17 39798649 39798962 -45639518 + AluSp SINE Alu 1 313 0 36 40 0 0 chr17 39799040 39799090 -45639390 + AT_rich Low_complexity Low_complexity 1 50 0 677 167 25 25 chr17 39799099 39799219 -45639261 - FLAM_A SINE Alu -13 120 1 1353 155 9 18 chr17 39799566 39799785 -45638695 - AluJo SINE Alu -95 217 1 2419 83 7 0 chr17 39800030 39800330 -45638150 + AluSp SINE Alu 1 302 -11 1371 95 0 0 chr17 39800330 39800499 -45637981 + AluSg/x SINE Alu 134 302 -10 2015 134 3 29 chr17 39801207 39801521 -45636959 - AluJb SINE Alu -6 306 1 192 274 16 16 chr17 39801624 39801686 -45636794 + MIR SINE MIR 141 202 -60 290 171 0 13 chr17 39805015 39805091 -45633389 + (TG)n Simple_repeat Simple_repeat 2 76 0 199 284 216 0 chr17 39805175 39805291 -45633189 + MIR3 SINE MIR 43 183 -25 204 329 0 0 chr17 39805614 39805693 -45632787 + G-rich Low_complexity Low_complexity 1 79 0 1861 88 32 4 chr17 39806956 39807206 -45631274 + AluSx SINE Alu 39 295 -17 2268 99 13 0 chr17 39807562 39807865 -45630615 + AluSp SINE Alu 1 307 -6 244 321 22 95 chr17 39807914 39808051 -45630429 - MER91A DNA MER1_type -40 156 30 259 278 10 62 chr17 39809642 39809739 -45628741 + MIR SINE MIR 58 149 -59 277 254 154 9 chr17 39810452 39810562 -45627918 + MIR SINE MIR 16 141 -67 1217 188 114 111 chr17 39810654 39810794 -45627686 - L1MC5 LINE L1 -60 7901 7763 1669 157 68 20 chr17 39810794 39811087 -45627393 - AluJo SINE Alu -5 307 1 1217 188 114 111 chr17 39811087 39811110 -45627370 - L1MC5 LINE L1 -198 7763 7742 586 94 0 0 chr17 39811110 39811195 -45627285 + L1PA16 LINE L1 6082 6166 0 1217 188 114 111 chr17 39811195 39811643 -45626837 - L1MC5 LINE L1 -219 7742 7287 1557 132 0 9 chr17 39811778 39812006 -45626474 + AluSq SINE Alu 1 226 -87 937 107 14 0 chr17 39862006 39862146 -45576334 + AluSp/q SINE Alu 161 302 -11 2431 54 0 0 chr17 39862477 39862774 -45575706 + AluY SINE Alu 1 297 -14 361 188 245 0 chr17 39862782 39862918 -45575562 + MIR3 SINE MIR 32 206 -2 2037 112 3 0 chr17 39863670 39863964 -45574516 - AluSq SINE Alu -16 297 3 504 148 11 23 chr17 39863964 39864052 -45574428 - AluJo/FRAM SINE Alu -17 295 209 1490 107 4 76 chr17 39864052 39864314 -45574166 - AluJo SINE Alu -69 243 1 747 166 21 201 chr17 39864394 39864677 -45573803 - MIR SINE MIR 0 262 31 246 154 29 154 chr17 39864740 39864787 -45573693 - L1MC5 LINE L1 -36 7925 7896 2238 106 0 0 chr17 39864787 39865088 -45573392 + AluSx SINE Alu 3 303 -9 246 154 29 154 chr17 39865088 39865144 -45573336 - L1MC5 LINE L1 -65 7896 7835 1887 120 0 31 chr17 39865589 39865909 -45572571 + AluSx SINE Alu 1 311 0 559 234 269 11 chr17 39865942 39866117 -45572363 - MIR SINE MIR 0 262 43 2853 91 41 2 chr17 39866442 39866859 -45571621 + L1MA4A LINE L1 5866 6298 -5 2207 164 27 38 chr17 39867092 39867567 -45570913 - L1ME2 LINE L1 -2 6162 5693 2763 85 42 7 chr17 39867568 39867978 -45570502 - L1MC3 LINE L1 0 7785 7362 580 173 7 17 chr17 39867979 39868125 -45570355 - L1ME2 LINE L1 -460 5702 5561 521 270 31 6 chr17 39868123 39868286 -45570194 - L1M4 LINE L1 -3025 3121 2955 * 659 216 163 7 chr17 39868463 39868616 -45569864 - MER5A DNA MER1_type -2 187 11 197 332 145 33 chr17 39868660 39868874 -45569606 - L2 LINE L2 -466 2848 2611 395 280 72 24 chr17 39868938 39869063 -45569417 - MER5A DNA MER1_type 0 189 59 348 24 0 0 chr17 39869125 39869166 -45569314 + (CA)n Simple_repeat Simple_repeat 2 42 0 2292 81 0 0 chr17 39869343 39869640 -45568840 + AluY SINE Alu 1 297 -14 532 351 56 36 chr17 39869772 39870162 -45568318 - L2 LINE L2 -493 2821 2424 218 289 195 21 chr17 39870199 39870389 -45568091 - L2 LINE L2 -1048 2266 2044 2459 49 3 0 chr17 39870762 39871067 -45567413 + AluY SINE Alu 1 306 -5 222 217 83 0 chr17 39871790 39871850 -45566630 - MIR SINE MIR 0 262 198 854 73 0 0 chr17 39871962 39872072 -45566408 - MER41C LTR ERV1 0 554 445 1432 169 103 15 chr17 39872707 39873038 -45565442 - L1MB7 LINE L1 0 6184 5825 733 126 0 34 chr17 39873040 39873159 -45565321 - FLAM_A SINE Alu 0 142 28 243 0 0 0 chr17 39873182 39873209 -45565271 + (A)n Simple_repeat Simple_repeat 1 27 0 906 107 29 14 chr17 39873215 39873355 -45565125 + AluJb SINE Alu 161 302 -10 638 209 131 5 chr17 39873358 39873549 -45564931 - L1MB7 LINE L1 -373 5793 5579 543 165 84 26 chr17 39873681 39873836 -45564644 - MLT1E LTR MaLR -369 198 38 1451 188 11 0 chr17 39873857 39874123 -45564357 - L1MB7 LINE L1 -597 5587 5319 268 289 0 0 chr17 39874208 39874284 -45564196 - L1MB7 LINE L1 -1014 5132 5057 580 244 99 45 chr17 39874284 39874485 -45563995 - MIR SINE MIR -31 231 20 207 167 0 0 chr17 39875288 39875330 -45563150 + CT-rich Low_complexity Low_complexity 3 44 0 319 301 151 30 chr17 39875436 39875768 -45562712 - L2 LINE L2 -910 2404 2033 202 71 0 0 chr17 39875871 39875899 -45562581 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 696 153 7 14 chr17 39875899 39876043 -45562437 + CT-rich Low_complexity Low_complexity 1 143 0 1734 154 31 7 chr17 39876065 39876358 -45562122 - AluJb SINE Alu -12 300 1 2081 124 0 0 chr17 39876618 39876916 -45561564 - AluSx SINE Alu -14 298 1 446 346 105 12 chr17 39876921 39877253 -45561227 + L2 LINE L2 2910 3272 0 2295 94 0 0 chr17 39877332 39877631 -45560849 - AluSq SINE Alu -14 299 1 261 0 0 0 chr17 39878625 39878654 -45559826 + (TG)n Simple_repeat Simple_repeat 1 29 0 2064 93 10 0 chr17 39879336 39879625 -45558855 - AluSg SINE Alu -18 292 1 529 86 0 0 chr17 39879875 39879945 -45558535 - AluJ/FRAM SINE Alu -25 287 218 2215 99 0 3 chr17 39880056 39880368 -45558112 + AluSx SINE Alu 1 311 -1 777 112 8 16 chr17 39880588 39880713 -45557767 + AluSg/x SINE Alu 186 309 -1 1276 265 23 64 chr17 39881226 39881503 -45556977 + L2 LINE L2 2895 3149 -164 1755 98 39 0 chr17 39881503 39881758 -45556722 - AluSp SINE Alu -9 304 40 1276 265 23 64 chr17 39881758 39881917 -45556563 + L2 LINE L2 3149 3313 0 1486 162 42 32 chr17 39881967 39882115 -45556365 + MER58B DNA MER1_type 28 173 -2247 1788 150 3 16 chr17 39882115 39882422 -45556058 + AluSg SINE Alu 1 303 -7 1486 162 42 32 chr17 39882422 39882583 -45555897 + MER58B DNA MER1_type 173 341 0 721 119 28 84 chr17 39884053 39884087 -45554393 - L1M3 LINE L1 -360 5823 5789 2105 127 0 0 chr17 39884087 39884395 -45554085 + AluSx SINE Alu 1 308 -4 721 119 28 84 chr17 39884395 39884503 -45553977 - L1M3 LINE L1 -394 5789 5689 2098 99 0 0 chr17 39884560 39884871 -45553609 - AluSx SINE Alu 0 311 1 2248 116 0 0 chr17 39886432 39886734 -45551746 - AluSc SINE Alu -7 302 1 1953 140 3 47 chr17 39886865 39887186 -45551294 - AluSx SINE Alu -5 307 1 1736 246 48 40 chr17 39887442 39888566 -45549914 - L1ME3 LINE L1 0 6170 4957 2400 100 0 0 chr17 39888567 39888867 -45549613 - AluSx SINE Alu -12 300 1 990 192 28 0 chr17 39888869 39889051 -45549429 - AluJo SINE Alu -8 304 118 563 288 45 11 chr17 39889155 39889422 -45549058 + L1MEc LINE L1 1791 2066 -4330 455 283 64 0 chr17 39889416 39889589 -45548891 + L1MEc LINE L1 2568 2751 -3464 * 206 174 22 0 chr17 39891353 39891399 -45547081 + A-rich Low_complexity Low_complexity 1 47 0 1980 93 62 3 chr17 39891631 39891920 -45546560 - MER41A LTR ERV1 -248 306 1 217 333 89 15 chr17 39891959 39892094 -45546386 + L2 LINE L2 2943 3087 -185 1217 143 5 11 chr17 39892218 39892407 -45546073 + AluJb SINE Alu 114 301 -11 261 258 76 0 chr17 39892409 39892475 -45546005 + L2 LINE L2 3200 3270 -2 290 65 0 22 chr17 39892642 39892688 -45545792 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1598 193 0 44 chr17 39893256 39893572 -45544908 + AluJb SINE Alu 1 302 -10 2072 122 0 48 chr17 39893575 39893887 -45544593 + AluSx SINE Alu 1 297 -15 2412 103 0 0 chr17 39893889 39894201 -45544279 + AluSq SINE Alu 1 312 -1 180 306 126 27 chr17 39894352 39894463 -45544017 + L2 LINE L2 2940 3061 -252 543 222 99 6 chr17 39894521 39894585 -45543895 + MER5B DNA MER1_type 2 59 -119 2296 108 0 0 chr17 39894585 39894882 -45543598 + AluSx SINE Alu 1 297 -15 543 222 99 6 chr17 39894882 39894979 -45543501 + MER5B DNA MER1_type 59 178 0 1212 94 0 25 chr17 39895111 39895271 -45543209 - AluSg/x SINE Alu -19 293 138 462 319 111 60 chr17 39895275 39895613 -45542867 + L2 LINE L2 1832 2151 -1163 1727 147 41 3 chr17 39895613 39895906 -45542574 - AluJo SINE Alu -8 304 1 462 319 111 60 chr17 39895906 39896188 -45542292 + L2 LINE L2 2151 2484 -830 2449 97 0 0 chr17 39896332 39896640 -45541840 + AluSx SINE Alu 1 308 -4 1191 109 0 0 chr17 39896640 39896796 -45541684 + AluSx SINE Alu 1 156 -156 2030 107 0 4 chr17 39896844 39897137 -45541343 + AluSg SINE Alu 22 313 0 1297 105 0 0 chr17 39897137 39897309 -45541171 + AluSq SINE Alu 131 302 -11 219 350 88 21 chr17 39897492 39897686 -45540794 + L2 LINE L2 2858 3064 -208 595 203 59 0 chr17 39898167 39898285 -45540195 - MIR3 SINE MIR -12 196 72 927 137 0 0 chr17 39898753 39898877 -45539603 + FLAM_C SINE Alu 1 124 -19 406 245 16 49 chr17 39899590 39899853 -45538627 + (CTGGGG)n Simple_repeat Simple_repeat 1 254 0 191 89 0 71 chr17 39899865 39899921 -45538559 + (CGGGG)n Simple_repeat Simple_repeat 2 53 0 760 154 97 80 chr17 39900629 39900714 -45537766 - MER45A DNA AcHobo -1403 178 96 2129 96 24 10 chr17 39900714 39901007 -45537473 + AluSq SINE Alu 1 297 -16 760 154 97 80 chr17 39901007 39901096 -45537384 - MER45A DNA AcHobo -1485 96 1 2271 118 7 0 chr17 39901338 39901642 -45536838 - AluSx SINE Alu -6 306 1 472 265 68 31 chr17 39901844 39902006 -45536474 - MIR3 SINE MIR -39 169 2 867 142 0 40 chr17 39902071 39902219 -45536261 + FLAM_C SINE Alu 1 142 -1 2061 131 35 35 chr17 39902334 39902709 -45535771 - THE1C LTR MaLR 0 375 1 467 77 0 0 chr17 39902887 39902952 -45535528 + LTR47A LTR ERVL 325 389 -63 1542 119 5 0 chr17 39902985 39903195 -45535285 - AluSq SINE Alu 0 313 103 527 308 93 14 chr17 39904132 39904346 -45534134 - L3 LINE CR1 -56 1521 1291 230 389 9 0 chr17 39904366 39904474 -45534006 - L3 LINE CR1 -413 1164 1056 664 241 69 34 chr17 39905359 39905458 -45533022 + L1ME LINE L1 4984 5078 -1068 1775 194 3 10 chr17 39905458 39905762 -45532718 - AluJo SINE Alu -9 303 2 664 241 69 34 chr17 39905762 39905924 -45532556 + L1ME LINE L1 5078 5254 -892 1138 123 0 13 chr17 39905932 39906087 -45532393 + AluSx SINE Alu 1 153 -159 1224 199 20 76 chr17 39906099 39906157 -45532323 + L1ME LINE L1 5272 5332 -830 2242 112 23 0 chr17 39906157 39906462 -45532018 + AluSx SINE Alu 1 312 0 1224 199 20 76 chr17 39906462 39906796 -45531684 + L1ME LINE L1 5332 5642 -520 311 179 0 132 chr17 39906838 39906944 -45531536 - L1MC4 LINE L1 -1339 6703 6612 306 226 9 66 chr17 39906926 39907032 -45531448 - L1MC4 LINE L1 -1339 6703 6604 * 418 113 57 40 chr17 39907117 39907294 -45531186 + (TA)n Simple_repeat Simple_repeat 1 180 0 316 287 62 39 chr17 39907904 39908033 -45530447 + L1ME3A LINE L1 6037 6168 -2 2472 73 13 0 chr17 39909562 39909863 -45528617 + AluY SINE Alu 1 305 -6 2051 164 0 0 chr17 39909941 39910246 -45528234 + AluJo SINE Alu 1 305 -7 991 128 6 32 chr17 39910305 39910461 -45528019 + AluJb SINE Alu 152 303 -9 2481 70 3 0 chr17 39911131 39911429 -45527051 - AluSp SINE Alu -14 299 1 2292 91 7 29 chr17 39911773 39912082 -45526398 + AluSx SINE Alu 1 302 -10 180 0 0 0 chr17 39912083 39912103 -45526377 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1904 82 3 64 chr17 39912221 39912503 -45525977 - AluSp SINE Alu -48 265 1 1308 161 0 36 chr17 39912550 39912773 -45525707 - AluJb SINE Alu -30 282 68 7729 128 124 33 chr17 39912776 39913398 -45525082 - pTR5 LTR ERV1 0 2438 1874 3640 47 2 5 chr17 39913398 39913847 -45524633 + LTR7 LTR ERV1 1 448 -2 7729 128 124 33 chr17 39913847 39914773 -45523707 - pTR5 LTR ERV1 -564 1874 749 452 136 0 0 chr17 39914773 39914839 -45523641 - AluJb SINE Alu -235 77 12 354 255 28 57 chr17 39914888 39914994 -45523486 - MIR SINE MIR -88 120 18 361 269 43 43 chr17 39915313 39915454 -45523026 + L1ME LINE L1 5505 5645 -525 2251 117 0 10 chr17 39915525 39915825 -45522655 - AluSx SINE Alu -15 297 1 755 229 148 0 chr17 39915825 39916035 -45522445 + MER58B DNA MER1_type 77 317 -24 256 246 43 72 chr17 39916057 39916090 -45522390 + L1ME LINE L1 5663 5695 -475 1884 152 9 25 chr17 39916090 39916268 -45522212 - AluJb SINE Alu -1 311 139 2386 111 0 0 chr17 39916268 39916574 -45521906 - AluSx SINE Alu -6 306 1 1884 152 9 25 chr17 39916574 39916711 -45521769 - AluJb SINE Alu -173 139 1 256 246 43 72 chr17 39916711 39916815 -45521665 + L1ME LINE L1 5695 5796 -374 2313 109 3 3 chr17 39917725 39918036 -45520444 - AluSx SINE Alu -1 311 1 1855 138 3 69 chr17 39918052 39918238 -45520242 - AluJo SINE Alu -1 311 155 2420 80 0 7 chr17 39918238 39918538 -45519942 - AluSg SINE Alu -12 298 1 1855 138 3 69 chr17 39918538 39918684 -45519796 - AluJo SINE Alu -157 155 1 2101 142 7 0 chr17 39919066 39919375 -45519105 - AluSx SINE Alu -1 311 1 2348 95 23 0 chr17 39920156 39920462 -45518018 - AluSq SINE Alu 0 313 1 279 0 0 0 chr17 39920918 39920949 -45517531 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 2074 136 0 0 chr17 39920950 39921237 -45517243 - AluSx SINE Alu -25 287 1 26 50 0 0 chr17 39921242 39921282 -45517198 + AT_rich Low_complexity Low_complexity 1 40 0 427 179 13 0 chr17 39921295 39921373 -45517107 - LTR47A LTR ERVL 0 452 374 242 222 0 0 chr17 39921373 39921427 -45517053 + AluJ/monomer SINE Alu 1 54 -249 4234 199 55 47 chr17 39921531 39921671 -45516809 + MER21-int LTR ERV1 2861 2998 -1193 2189 135 3 0 chr17 39921671 39921974 -45516506 - AluSx SINE Alu -8 304 1 2022 133 0 45 chr17 39921976 39922285 -45516195 - AluJb SINE Alu -17 295 1 4234 199 55 47 chr17 39922285 39923174 -45515306 + MER21-int LTR ERV1 2998 3902 -289 572 232 52 76 chr17 39923179 39923390 -45515090 + MER21B LTR ERV1 511 716 -147 2066 134 7 10 chr17 39923393 39923698 -45514782 + AluSq SINE Alu 1 304 -9 258 70 23 0 chr17 39923776 39923819 -45514661 + L1ME4a LINE L1 6074 6117 -4 21 0 0 0 chr17 39924210 39924231 -45514249 + AT_rich Low_complexity Low_complexity 1 21 0 2502 83 0 0 chr17 39924353 39924653 -45513827 + AluSx SINE Alu 8 307 -5 2356 88 27 0 chr17 39925776 39926073 -45512407 + AluSp SINE Alu 1 305 -8 1003 175 80 5 chr17 39926236 39926436 -45512044 + MER58C DNA MER1_type 1 215 0 225 0 0 0 chr17 39926525 39926550 -45511930 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 367 155 0 0 chr17 39927248 39927306 -45511174 + LTR8 LTR ERV1 634 691 0 2217 99 20 0 chr17 39927754 39928046 -45510434 + AluSx SINE Alu 1 298 -14 275 295 84 0 chr17 39928674 39928769 -45509711 - L3 LINE CR1 -185 1392 1290 555 106 0 0 chr17 39928789 39928874 -45509606 - AluJ/FRAM SINE Alu 0 312 228 2239 96 3 3 chr17 39928979 39929271 -45509209 + AluSx SINE Alu 1 292 -20 265 265 121 0 chr17 39929746 39929829 -45508651 - MIR SINE MIR -66 142 50 335 230 132 75 chr17 39930269 39930443 -45508037 - MIR SINE MIR -43 219 36 216 67 0 0 chr17 39930511 39930541 -45507939 + (TCCCC)n Simple_repeat Simple_repeat 2 31 0 1465 111 5 0 chr17 39930975 39931164 -45507316 - AluSp SINE Alu -15 298 109 872 104 17 0 chr17 39931241 39931356 -45507124 - AluSq/x SINE Alu -195 117 1 304 257 10 59 chr17 39932314 39932415 -45506065 + L1MC4 LINE L1 6614 6709 -1333 979 170 11 16 chr17 39932545 39932727 -45505753 - AluJb SINE Alu -131 181 1 1383 224 106 17 chr17 39932728 39933211 -45505269 + L1ME3 LINE L1 5637 6162 0 1716 252 42 54 chr17 39933561 39934087 -45504393 + L2 LINE L2 1683 2203 -1111 2135 115 0 7 chr17 39934087 39934382 -45504098 + AluSg SINE Alu 1 293 -17 1716 252 42 54 chr17 39934382 39934450 -45504030 + L2 LINE L2 2203 2270 -1044 418 314 52 16 chr17 39934502 39934696 -45503784 + L2 LINE L2 3113 3313 0 575 219 95 102 chr17 39934935 39934952 -45503528 - MER20B DNA MER1_type -116 667 651 2275 113 7 0 chr17 39934952 39935253 -45503227 + AluSp SINE Alu 1 303 -10 2308 80 7 0 chr17 39935253 39935539 -45502941 + AluSg SINE Alu 8 295 -15 575 219 95 102 chr17 39935539 39935940 -45502540 - MER20B DNA MER1_type -130 653 251 216 292 0 15 chr17 39935999 39936064 -45502416 - L2 LINE L2 -217 3055 2992 213 245 69 39 chr17 39936064 39936166 -45502314 - L2 LINE L2 -878 2436 2332 287 314 108 0 chr17 39936332 39936434 -45502046 - L2 LINE L2 -576 2738 2626 485 118 0 59 chr17 39937048 39937133 -45501347 + AluSp SINE Alu 114 193 -120 227 97 0 105 chr17 39937356 39937480 -45501000 + (TATATG)n Simple_repeat Simple_repeat 1 111 0 324 94 0 0 chr17 39937580 39937633 -45500847 + (CA)n Simple_repeat Simple_repeat 2 54 0 199 322 40 79 chr17 39937790 39937942 -45500538 - L2 LINE L2 -49 3223 3078 271 309 55 27 chr17 39938719 39938829 -45499651 - L2 LINE L2 -24 3248 3136 887 122 0 23 chr17 39939771 39939902 -45498578 + AluJo/FLAM SINE Alu 2 129 -173 2180 86 3 3 chr17 39939902 39940194 -45498286 - AluSq SINE Alu -21 292 1 1932 125 28 0 chr17 39940194 39940483 -45497997 - AluSx SINE Alu -15 297 1 183 80 0 0 chr17 39942006 39942031 -45496449 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2064 109 7 0 chr17 39942086 39942380 -45496100 + AluSx SINE Alu 1 296 -16 224 289 22 33 chr17 39942631 39942721 -45495759 + L2 LINE L2 3003 3091 -181 1341 59 6 0 chr17 39943196 39943365 -45495115 - AluSp SINE Alu -11 302 133 1633 137 8 19 chr17 39943473 39943735 -45494745 - AluJb SINE Alu -53 259 1 2023 248 14 104 chr17 39943736 39943946 -45494534 - L1ME LINE L1 -4609 1652 1425 797 148 31 0 chr17 39943946 39944074 -45494406 - FLAM_C SINE Alu -1 132 1 2023 248 14 104 chr17 39944074 39944132 -45494348 - L1ME LINE L1 -4836 1425 1363 2241 87 3 16 chr17 39944132 39944442 -45494038 - AluY SINE Alu -5 306 1 2023 248 14 104 chr17 39944442 39945331 -45493149 - L1ME LINE L1 -4898 1363 553 1648 190 10 0 chr17 39945331 39945631 -45492849 - AluJo SINE Alu -9 303 1 2023 248 14 104 chr17 39945631 39945645 -45492835 - L1ME LINE L1 -5708 553 539 693 191 66 0 chr17 39946081 39946217 -45492263 - AluJo/FRAM SINE Alu -9 303 159 1443 164 0 8 chr17 39946217 39946461 -45492019 - AluJb SINE Alu -70 242 1 570 204 122 86 chr17 39946484 39946542 -45491938 - L1ME LINE L1 -5534 536 482 415 237 165 0 chr17 39946542 39946639 -45491841 + MER81 DNA DNA 1 113 -1 570 204 122 86 chr17 39946639 39946801 -45491679 - L1ME LINE L1 -5588 482 308 513 244 8 23 chr17 39946885 39947016 -45491464 - L1ME LINE L1 -5940 130 2 1853 149 7 0 chr17 39947395 39947690 -45490790 + AluJb SINE Alu 1 297 -15 1127 226 186 0 chr17 39948112 39948263 -45490217 + L1MC4 LINE L1 6458 6580 -1462 1818 138 50 3 chr17 39948263 39948561 -45489919 + AluJo SINE Alu 1 312 0 1127 226 186 0 chr17 39948561 39948737 -45489743 + L1MC4 LINE L1 6580 6846 -1196 1103 155 0 58 chr17 39948739 39948945 -45489535 + AluSx SINE Alu 5 198 -114 914 196 31 10 chr17 39948950 39949144 -45489336 + L1MC4 LINE L1 6869 7066 -976 244 213 0 67 chr17 39949204 39949279 -45489201 + L1MC4a LINE L1 7140 7209 -599 239 322 11 0 chr17 39950143 39950230 -45488250 + MIR SINE MIR 58 145 -117 2089 100 0 7 chr17 39950352 39950677 -45487803 - AluSx SINE Alu 0 312 1 1846 124 21 0 chr17 39950679 39950962 -45487518 - AluJo SINE Alu -23 289 1 342 45 0 0 chr17 39952256 39952300 -45486180 + (TG)n Simple_repeat Simple_repeat 2 45 0 541 288 26 34 chr17 39953271 39953504 -45484976 + L2 LINE L2 3042 3272 0 1310 154 63 42 chr17 39956416 39956701 -45481779 + AluJb SINE Alu 1 291 -21 1770 128 0 92 chr17 39956705 39957033 -45481447 + AluSx SINE Alu 6 303 -9 285 276 90 11 chr17 39957082 39957257 -45481223 - MLT1J LTR MaLR -331 180 91 647 249 30 35 chr17 39957416 39957585 -45480895 - MER5B DNA MER1_type -6 172 5 432 235 0 87 chr17 39958292 39958407 -45480073 + MER45A DNA AcHobo 1 105 -73 1516 148 24 114 chr17 39958407 39958739 -45479741 - AluJb SINE Alu 0 302 1 1702 170 0 7 chr17 39958745 39959039 -45479441 - AluSx SINE Alu -19 293 2 2028 132 0 7 chr17 39959066 39959376 -45479104 + AluSx SINE Alu 3 310 -2 235 169 11 157 chr17 39959376 39959465 -45479015 + MER45A DNA AcHobo 103 178 0 439 277 132 6 chr17 39959750 39959909 -45478571 + MIR3 SINE MIR 30 208 0 184 275 29 43 chr17 39962939 39963008 -45475472 - L2 LINE L2 -20 3293 3226 2164 76 14 3 chr17 39963116 39963405 -45475075 - AluSc SINE Alu -17 292 1 1292 103 10 5 chr17 39963815 39964009 -45474471 + AluSg/x SINE Alu 107 301 -9 4023 66 45 2 chr17 39965210 39965723 -45472757 + LTR8 LTR ERV1 1 535 -156 1588 162 3 69 chr17 39966781 39967115 -45471365 + AluSx SINE Alu 1 312 0 1584 149 73 14 chr17 39967118 39967406 -45471074 + AluSx SINE Alu 1 305 -7 2247 96 0 0 chr17 39967951 39968252 -45470228 + AluSc SINE Alu 1 301 -8 1900 118 29 10 chr17 39968267 39968573 -45469907 + AluSx SINE Alu 1 312 0 2056 109 0 26 chr17 39968707 39969018 -45469462 + AluSx SINE Alu 1 303 -9 27 81 0 0 chr17 39969531 39969593 -45468887 + AT_rich Low_complexity Low_complexity 1 62 0 800 96 70 0 chr17 39969730 39969845 -45468635 + FRAM SINE Alu 44 166 -10 1663 150 11 3 chr17 39972657 39972944 -45465536 + AluSx SINE Alu 1 289 -23 2037 121 3 7 chr17 39972985 39973291 -45465189 + AluSx SINE Alu 1 305 -7 2238 84 14 0 chr17 39973299 39973627 -45464853 + AluSx SINE Alu 6 337 0 335 241 9 74 chr17 39973956 39974064 -45464416 - L2 LINE L2 -222 3050 2950 2390 139 49 40 chr17 39976788 39977240 -45461240 - L1MC3 LINE L1 -126 7659 7204 304 230 23 11 chr17 39977249 39977336 -45461144 - MLT1F1 LTR MaLR -443 124 37 2225 84 3 3 chr17 39977497 39977794 -45460686 - AluSg SINE Alu -13 297 1 373 286 67 51 chr17 39982218 39982396 -45456084 + L2 LINE L2 3084 3264 -8 24 0 0 0 chr17 39982447 39982471 -45456009 + AT_rich Low_complexity Low_complexity 1 24 0 2096 128 0 32 chr17 39982618 39982962 -45455518 - L1PA16 LINE L1 -23 6143 5811 1101 151 103 135 chr17 39983228 39983540 -45454940 - AluJo SINE Alu 0 302 1 222 289 0 0 chr17 39983610 39983662 -45454818 + L2 LINE L2 3210 3261 -11 1872 129 0 45 chr17 39983801 39984111 -45454369 + AluJb SINE Alu 1 296 -16 30 0 0 0 chr17 39984169 39984199 -45454281 + AT_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr17 39984332 39984380 -45454100 + AT_rich Low_complexity Low_complexity 1 48 0 1599 153 16 42 chr17 39984381 39984689 -45453791 + AluJb SINE Alu 1 300 -12 1046 112 0 0 chr17 39984832 39984984 -45453496 + AluSg/x SINE Alu 154 305 -7 799 169 0 22 chr17 39985178 39985314 -45453166 - FLAM_C SINE Alu 0 133 1 740 162 15 15 chr17 39985506 39985642 -45452838 - FLAM_A SINE Alu -1 141 6 246 297 16 0 chr17 39985674 39985738 -45452742 + L2 LINE L2 3208 3272 0 217 0 0 0 chr17 39986657 39986681 -45451799 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2347 82 0 0 chr17 39986681 39986960 -45451520 - AluSq SINE Alu -28 285 7 2759 261 75 73 chr17 39987121 39987596 -45450884 - L1M4 LINE L1 -1218 4928 4455 2270 92 14 0 chr17 39987596 39987889 -45450591 - AluSp SINE Alu -16 297 1 2759 261 75 73 chr17 39987889 39988361 -45450119 - L1M4 LINE L1 -1691 4455 3985 2287 122 3 0 chr17 39988361 39988672 -45449808 - AluSx SINE Alu 0 312 1 2759 261 75 73 chr17 39988672 39989092 -45449388 - L1M4 LINE L1 -2161 3985 3567 2191 134 3 0 chr17 39989092 39989391 -45449089 - AluSx SINE Alu -12 300 1 2759 261 75 73 chr17 39989391 39989441 -45449039 - L1M4 LINE L1 -2579 3567 3519 2381 90 0 0 chr17 39989441 39989763 -45448717 - AluY SINE Alu 0 311 1 2759 261 75 73 chr17 39989763 39989973 -45448507 - L1M4 LINE L1 -2627 3519 3311 2105 150 0 7 chr17 39989973 39990280 -45448200 + AluSx SINE Alu 1 305 -7 2759 261 75 73 chr17 39990280 39990703 -45447777 - L1M4 LINE L1 -2835 3311 2870 1640 148 3 85 chr17 39990709 39991027 -45447453 + AluJb SINE Alu 1 292 -20 1894 149 10 21 chr17 39991043 39991331 -45447149 + AluJo SINE Alu 1 285 -27 301 323 46 99 chr17 39991354 39991788 -45446692 - L1MEd LINE L1 -5488 631 221 2020 104 0 4 chr17 39991996 39992264 -45446216 + AluSq SINE Alu 1 267 -46 438 20 0 0 chr17 39992273 39992324 -45446156 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 424 216 102 60 chr17 39992391 39992558 -45445922 - HAL1 LINE L1 -2333 174 1 342 293 121 6 chr17 39992939 39993113 -45445367 - MER117 DNA MER1_type 0 197 4 805 199 47 6 chr17 39994547 39994718 -45443762 + MER5B DNA MER1_type 1 178 0 337 273 88 21 chr17 39995298 39995347 -45443133 - MIR3 SINE MIR -34 174 130 2030 93 3 84 chr17 39995347 39995658 -45442822 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 39995658 39995686 -45442794 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 337 273 88 21 chr17 39995686 39995800 -45442680 - MIR3 SINE MIR -77 131 2 2460 99 3 0 chr17 39996293 39996605 -45441875 - AluSq SINE Alu 0 313 1 552 291 56 15 chr17 39996998 39997194 -45441286 - MIR SINE MIR -48 214 11 258 204 0 0 chr17 39997193 39997242 -45441238 - L2 LINE L2 -5 3267 3219 * 864 98 15 23 chr17 39997341 39997474 -45441006 + FLAM_C SINE Alu 1 132 -1 1124 136 0 4 chr17 39998050 39998271 -45440209 + AluSx SINE Alu 2 304 -8 644 222 111 19 chr17 39998286 39998502 -45439978 - MIR SINE MIR -7 255 20 22 0 0 0 chr17 39998918 39998940 -45439540 + AT_rich Low_complexity Low_complexity 1 22 0 2205 106 0 64 chr17 39998949 39999279 -45439201 + AluSq SINE Alu 5 313 0 684 85 0 19 chr17 39999787 39999893 -45438587 + AluSg/x SINE Alu 209 312 0 28 0 0 0 chr17 40000140 40000168 -45438312 + AT_rich Low_complexity Low_complexity 1 28 0 418 304 40 34 chr17 40000585 40000733 -45437747 + MIR SINE MIR 20 168 -94 1799 142 6 28 chr17 40000749 40001066 -45437414 + AluSx SINE Alu 1 310 -2 1957 104 43 21 chr17 40001271 40001550 -45436930 + AluSx SINE Alu 6 290 -22 1535 118 4 41 chr17 40001927 40002168 -45436312 + L1MC3 LINE L1 7352 7583 -202 2393 83 7 3 chr17 40002168 40002468 -45436012 + AluSq SINE Alu 1 301 -12 1535 118 4 41 chr17 40002468 40002497 -45435983 + L1MC3 LINE L1 7583 7612 -173 2374 96 3 7 chr17 40002522 40002825 -45435655 - AluSx SINE Alu -10 302 1 1094 104 0 0 chr17 40002825 40002960 -45435520 - AluSq/x SINE Alu -177 135 1 572 289 56 48 chr17 40003899 40003969 -45434511 - MIR SINE MIR -10 252 184 2332 82 0 26 chr17 40003969 40004274 -45434206 - AluY SINE Alu -10 301 5 572 289 56 48 chr17 40004274 40004452 -45434028 - MIR SINE MIR -78 184 2 917 224 160 52 chr17 40005102 40005490 -45432990 + LTR7 LTR ERV1 1 430 -20 2479 66 0 20 chr17 40006365 40006668 -45431812 - AluY SINE Alu -14 297 1 221 225 0 0 chr17 40010597 40010637 -45427843 + polypurine Low_complexity Low_complexity 3 42 0 192 293 141 10 chr17 40013650 40013749 -45424731 - MIR SINE MIR -117 145 34 260 255 255 25 chr17 40014119 40014276 -45424204 + MIR SINE MIR 20 212 -50 211 347 40 45 chr17 40014968 40015144 -45423336 - L3 LINE CR1 -408 1169 995 482 333 104 26 chr17 40015349 40015700 -45422780 + L1ME4a LINE L1 5519 5904 -217 486 184 80 145 chr17 40015713 40015787 -45422693 + L1MC5 LINE L1 7395 7472 -489 2123 123 43 3 chr17 40015787 40016087 -45422393 + AluJb SINE Alu 1 312 0 486 184 80 145 chr17 40016087 40016205 -45422275 + L1MC5 LINE L1 7472 7596 -365 2281 124 0 3 chr17 40016205 40016511 -45421969 + AluSx SINE Alu 1 305 -7 486 184 80 145 chr17 40016511 40016639 -45421841 + L1MC5 LINE L1 7596 7731 -230 2451 88 0 0 chr17 40016639 40016935 -45421545 + AluSq SINE Alu 1 296 -17 2295 103 3 7 chr17 40016944 40017246 -45421234 + AluSg SINE Alu 1 301 -9 486 184 80 145 chr17 40017246 40017326 -45421154 + L1MC5 LINE L1 7739 7780 -181 2530 81 0 3 chr17 40017915 40018225 -45420255 - AluSx SINE Alu -3 309 1 2019 149 0 19 chr17 40019033 40019342 -45419138 + AluJb SINE Alu 1 303 -9 1832 126 0 54 chr17 40019362 40019656 -45418824 + AluSx SINE Alu 18 295 -17 21 0 0 0 chr17 40021620 40021641 -45416839 + GC_rich Low_complexity Low_complexity 1 21 0 316 128 234 32 chr17 40023221 40023315 -45415165 + MIR SINE MIR 120 232 -30 375 311 147 18 chr17 40023412 40023666 -45414814 - L1ME LINE L1 -356 5765 5545 2344 82 3 0 chr17 40023666 40023958 -45414522 - AluSx SINE Alu -15 297 5 375 311 147 18 chr17 40023958 40024099 -45414381 - L1ME LINE L1 -576 5545 5319 2639 49 3 3 chr17 40024549 40024856 -45413624 + AluY SINE Alu 1 307 -4 345 135 0 0 chr17 40025500 40025552 -45412928 + Alu SINE Alu 1 52 -251 1747 145 3 89 chr17 40025552 40025877 -45412603 + AluJb SINE Alu 4 300 -12 442 267 200 0 chr17 40025880 40026060 -45412420 + MIR SINE MIR 25 240 -22 1714 182 7 7 chr17 40026729 40027026 -45411454 - AluJo SINE Alu -15 297 1 298 237 40 0 chr17 40027050 40027126 -45411354 + L2 LINE L2 3226 3304 -9 407 253 169 68 chr17 40027579 40027816 -45410664 + MIR SINE MIR 2 262 0 1720 170 28 7 chr17 40027995 40028278 -45410202 - AluJb SINE Alu -23 289 1 749 194 0 0 chr17 40028283 40028412 -45410068 - FLAM_A SINE Alu -4 129 1 2812 163 26 32 chr17 40028426 40028456 -45410024 - L1MB7 LINE L1 -41 6143 6114 2171 116 7 3 chr17 40028456 40028749 -45409731 + AluSc SINE Alu 1 294 -15 2812 163 26 32 chr17 40028749 40029284 -45409196 - L1MB7 LINE L1 -70 6114 5581 751 282 160 1 chr17 40029734 40030233 -45408247 + L2 LINE L2 2714 3291 -22 805 173 0 0 chr17 40030859 40030992 -45407488 - FLAM_C SINE Alu 0 133 1 509 218 53 8 chr17 40031090 40031223 -45407257 - FLAM_C SINE Alu -1 142 4 1089 160 23 0 chr17 40031781 40031956 -45406524 - AluSg/x SINE Alu 0 312 134 2324 96 3 10 chr17 40031956 40032270 -45406210 - AluSx SINE Alu 0 312 1 1775 151 57 0 chr17 40032573 40032852 -45405628 + AluJo SINE Alu 1 295 -17 210 250 21 0 chr17 40033274 40033322 -45405158 - MER5A DNA MER1_type -113 76 28 1916 169 26 5 chr17 40033815 40034193 -45404287 - MLT1B LTR MaLR -4 386 1 2326 105 0 7 chr17 40036651 40036956 -45401524 + AluSx SINE Alu 1 303 -9 255 224 0 0 chr17 40039041 40039090 -45399390 + Tigger1 DNA MER2_type 27 75 -2343 2211 118 0 0 chr17 40039090 40039387 -45399093 + AluSx SINE Alu 1 297 -15 7724 116 12 51 chr17 40039389 40039615 -45398865 + Tigger1 DNA MER2_type 61 294 -2124 2166 109 7 0 chr17 40039615 40039909 -45398571 + AluSx SINE Alu 1 296 -16 7724 116 12 51 chr17 40039909 40040089 -45398391 + Tigger1 DNA MER2_type 294 479 -1939 1779 154 10 20 chr17 40040089 40040394 -45398086 + AluJb SINE Alu 1 302 -10 7724 116 12 51 chr17 40040394 40040565 -45397915 + Tigger1 DNA MER2_type 479 655 -1763 2251 94 10 0 chr17 40040565 40040853 -45397627 + AluSq SINE Alu 1 291 -22 1567 138 0 4 chr17 40040862 40041093 -45397387 + AluSg/x SINE Alu 73 302 -10 7724 116 12 51 chr17 40041093 40041781 -45396699 + Tigger1 DNA MER2_type 663 1289 -1129 944 133 7 0 chr17 40041787 40041922 -45396558 - AluSg/x SINE Alu -43 269 134 1725 111 71 4 chr17 40041922 40042202 -45396278 + Tigger1 DNA MER2_type 1294 1592 -826 981 127 0 0 chr17 40042204 40042338 -45396142 + AluSq/x SINE Alu 1 134 -178 2242 98 3 0 chr17 40042445 40042732 -45395748 - AluSx SINE Alu -24 288 1 917 93 93 128 chr17 40042732 40042824 -45395656 + Tigger1 DNA MER2_type 2222 2316 -102 1960 125 7 20 chr17 40042824 40043119 -45395361 - AluJb SINE Alu -19 293 3 917 93 93 128 chr17 40043119 40043230 -45395250 + Tigger1 DNA MER2_type 2316 2418 0 2687 74 59 135 chr17 40043730 40044219 -45394261 - MLT2A2 LTR ERVL 0 453 2 2322 106 0 7 chr17 40044658 40044959 -45393521 - AluSx SINE Alu -13 299 1 2100 117 3 0 chr17 40045010 40045315 -45393165 - AluSx SINE Alu 0 306 1 799 191 0 0 chr17 40045469 40045605 -45392875 + FLAM_C SINE Alu 5 140 -3 1845 149 3 20 chr17 40045723 40045855 -45392625 + AluJb SINE Alu 2 135 -177 2389 83 0 0 chr17 40045855 40046145 -45392335 + AluY SINE Alu 1 290 -21 2069 111 3 17 chr17 40046146 40046443 -45392037 + AluSc SINE Alu 1 293 -16 1845 149 3 20 chr17 40046443 40046609 -45391871 + AluJb SINE Alu 134 297 -15 993 132 102 56 chr17 40046638 40046835 -45391645 - MSTA LTR MaLR 0 428 223 4227 135 38 9 chr17 40046938 40047673 -45390807 - L1MC3 LINE L1 -1764 6021 5266 234 189 0 0 chr17 40047684 40047764 -45390716 - Alu SINE Alu 0 330 251 1234 276 54 30 chr17 40047821 40048720 -45389760 + L1MEc LINE L1 1847 2719 -3496 6839 224 29 10 chr17 40048842 40050491 -45387989 - L1M4 LINE L1 -945 5201 3522 1852 205 22 46 chr17 40050542 40051000 -45387480 + MLT1D LTR MaLR 1 447 -58 465 116 0 0 chr17 40051002 40051071 -45387409 - FLAM_C SINE Alu -5 138 70 207 0 0 0 chr17 40051104 40051127 -45387353 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2381 219 19 53 chr17 40051127 40051186 -45387294 - L1M4 LINE L1 -2611 3535 3476 2275 100 0 22 chr17 40051186 40051505 -45386975 + AluSx SINE Alu 1 312 0 2381 219 19 53 chr17 40051505 40052213 -45386267 - L1M4 LINE L1 -2670 3476 2794 2260 82 10 16 chr17 40052234 40052537 -45385943 - AluSg SINE Alu -9 301 1 541 86 86 0 chr17 40052564 40052645 -45385835 + FLAM_A SINE Alu 35 122 -20 1811 235 37 9 chr17 40052673 40053132 -45385348 - L1M4 LINE L1 -3410 2736 2265 1058 128 115 111 chr17 40053295 40053327 -45385153 - MER46A DNA MER2_type -2495 236 206 1235 178 174 15 chr17 40053327 40053586 -45384894 + AluJo SINE Alu 1 300 -2 1058 128 115 111 chr17 40053586 40053788 -45384692 - MER46A DNA MER2_type -2525 206 1 5373 88 8 43 chr17 40053993 40054241 -45384239 - L1PB3 LINE L1 -3 6151 5896 248 0 31 0 chr17 40054241 40054273 -45384207 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1698 171 7 4 chr17 40054274 40054555 -45383925 - AluJb SINE Alu -30 282 1 2095 140 13 0 chr17 40054565 40054873 -45383607 - AluSx SINE Alu 0 312 1 5373 88 8 43 chr17 40054873 40055090 -45383390 - L1PB3 LINE L1 -267 5887 5664 1808 167 3 10 chr17 40055090 40055390 -45383090 + AluJb SINE Alu 1 298 -14 5373 88 8 43 chr17 40055390 40055709 -45382771 - L1PB3 LINE L1 -490 5664 5381 430 194 69 125 chr17 40055709 40055739 -45382741 + MER106A DNA MER1_type 86 116 -120 2078 131 7 0 chr17 40055739 40056030 -45382450 + AluSx SINE Alu 3 295 -17 430 194 69 125 chr17 40056030 40056159 -45382321 + MER106A DNA MER1_type 116 236 0 233 281 35 0 chr17 40056242 40056299 -45382181 + L3 LINE CR1 1504 1562 -15 1430 138 17 30 chr17 40056531 40056763 -45381717 - AluJo SINE Alu -1 311 83 227 288 62 0 chr17 40056763 40056843 -45381637 + MIR3 SINE MIR 103 187 -21 2070 137 0 20 chr17 40057072 40057378 -45381102 + AluJb SINE Alu 1 300 -12 1784 154 0 56 chr17 40057378 40057682 -45380798 + AluSx SINE Alu 1 288 -24 2305 93 3 3 chr17 40057997 40058297 -45380183 - AluSx SINE Alu -12 300 1 1829 111 104 7 chr17 40059222 40059502 -45378978 - AluSq SINE Alu -6 307 1 1283 221 69 74 chr17 40059684 40060077 -45378403 - LTR41 LTR ERVL -6 767 377 2097 113 28 0 chr17 40060084 40060375 -45378105 + AluSq SINE Alu 1 299 -14 900 191 204 0 chr17 40060420 40060640 -45377840 - LTR41 LTR ERVL -508 265 1 1853 150 14 10 chr17 40060716 40061009 -45377471 - AluJo SINE Alu -18 294 1 2231 109 0 0 chr17 40061257 40061563 -45376917 + AluSx SINE Alu 1 306 0 3408 264 16 41 chr17 40061625 40062627 -45375853 - ERVL LTR ERVL -411 5353 4377 2376 88 7 13 chr17 40062891 40063197 -45375283 + AluSq SINE Alu 1 304 -9 484 257 103 46 chr17 40063273 40063491 -45374989 - MIR SINE MIR -28 234 3 2314 104 10 0 chr17 40063714 40064021 -45374459 - AluSx SINE Alu -2 310 1 1730 128 0 119 chr17 40064735 40065088 -45373392 + AluY SINE Alu 1 311 0 1762 192 74 61 chr17 40066869 40067488 -45370992 - Charlie2 DNA MER1_type -6 2856 2230 333 191 281 0 chr17 40067524 40067613 -45370867 - Charlie2 DNA MER1_type -2471 311 198 1880 180 10 0 chr17 40067615 40067921 -45370559 + AluJb SINE Alu 1 309 -3 211 200 0 0 chr17 40067921 40067956 -45370524 + polypurine Low_complexity Low_complexity 1 35 0 866 130 5 32 chr17 40067956 40068141 -45370339 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 516 133 57 67 chr17 40068173 40068278 -45370202 - Charlie2 DNA MER1_type -2634 148 45 183 129 0 0 chr17 40068400 40068431 -45370049 + (TGGA)n Simple_repeat Simple_repeat 2 32 0 651 184 147 42 chr17 40069056 40069246 -45369234 + MER63A DNA MER1_type 1 210 0 2188 102 0 22 chr17 40069484 40069828 -45368652 + AluY SINE Alu 1 311 0 180 111 0 0 chr17 40069967 40069994 -45368486 + (A)n Simple_repeat Simple_repeat 1 27 0 1791 158 35 0 chr17 40070026 40070311 -45368169 + AluJb SINE Alu 1 295 -17 1683 204 81 43 chr17 40071120 40071565 -45366915 + MLT1C LTR MaLR 6 467 0 1262 203 5 0 chr17 40073061 40073283 -45365197 + MER58A DNA MER1_type 2 224 0 2159 109 26 10 chr17 40073369 40073673 -45364807 - AluSx SINE Alu -3 309 1 974 206 0 0 chr17 40074092 40074262 -45364218 - FAM SINE Alu -5 170 1 2089 127 27 12 chr17 40074497 40074581 -45363899 - MER44D DNA MER2_type -1883 608 527 1691 166 52 38 chr17 40074581 40074924 -45363556 - MER7A DNA MER2_type 0 346 1 2089 127 27 12 chr17 40074924 40075171 -45363309 - MER44D DNA MER2_type -1964 527 2 1744 135 36 29 chr17 40075250 40075531 -45362949 + AluSx SINE Alu 24 306 -6 1712 137 37 57 chr17 40076335 40076635 -45361845 - AluSx SINE Alu -18 294 1 328 266 246 24 chr17 40076703 40076951 -45361529 - L2 LINE L2 -2 3311 3009 368 231 46 9 chr17 40077055 40077163 -45361317 + L1ME4a LINE L1 5966 6077 -44 397 208 10 73 chr17 40077164 40077260 -45361220 + MER21B LTR ERV1 1 90 -773 267 31 0 0 chr17 40077261 40077293 -45361187 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1665 204 87 78 chr17 40077385 40077982 -45360498 + MER21B LTR ERV1 98 836 -95 5045 215 23 9 chr17 40077987 40078905 -45359575 + MER21B-int LTR ERV1 12 916 -3275 2182 106 57 41 chr17 40078905 40079234 -45359246 + THE1C LTR MaLR 1 338 -37 2536 85 0 0 chr17 40079234 40079541 -45358939 - AluY SINE Alu -4 307 1 2182 106 57 41 chr17 40079541 40079580 -45358900 + THE1C LTR MaLR 338 375 0 10752 100 28 38 chr17 40079580 40081177 -45357303 + THE1C-int LTR MaLR 1 1580 0 2005 117 49 78 chr17 40081177 40081353 -45357127 + THE1C LTR MaLR 1 180 -195 2459 83 0 0 chr17 40081353 40081654 -45356826 - AluY SINE Alu -10 301 1 2005 117 49 78 chr17 40081654 40081863 -45356617 + THE1C LTR MaLR 180 375 0 5045 215 23 9 chr17 40081863 40081904 -45356576 + MER21B-int LTR ERV1 915 986 -3205 1303 252 10 13 chr17 40081970 40082280 -45356200 - MER74B LTR ERVL -76 546 238 4085 204 16 48 chr17 40082280 40082706 -45355774 + MER21B-int LTR ERV1 1950 2388 -1803 1932 179 0 0 chr17 40082706 40083002 -45355478 - AluJb SINE Alu -16 296 1 4085 204 16 48 chr17 40083002 40083490 -45354990 + MER21B-int LTR ERV1 2388 2835 -1356 462 257 115 25 chr17 40133504 40133705 -45304775 - MLT1H1 LTR MaLR -322 233 1 310 214 0 26 chr17 40134062 40134140 -45304340 - MIR SINE MIR -47 161 83 369 355 68 8 chr17 40134229 40134480 -45304000 + L2 LINE L2 2565 2830 -484 282 269 106 19 chr17 40134494 40134598 -45303882 + MER20B DNA MER1_type 16 128 -655 288 152 22 0 chr17 40134699 40134745 -45303735 - Alu SINE Alu -254 47 1 2116 145 10 0 chr17 40134941 40135245 -45303235 + AluSx SINE Alu 1 307 -5 603 267 6 19 chr17 40135249 40135410 -45303070 + AluJb SINE Alu 138 296 -16 970 133 40 0 chr17 40135430 40135580 -45302900 + AluSg/x SINE Alu 150 305 -7 2005 156 0 3 chr17 40135714 40136003 -45302477 - AluJb SINE Alu -24 288 1 1496 188 13 33 chr17 40136488 40136791 -45301689 + AluJo SINE Alu 12 308 -4 758 175 70 100 chr17 40137052 40137183 -45301297 + AluJo SINE Alu 4 128 -184 2117 123 0 32 chr17 40137183 40137320 -45301160 + AluSx SINE Alu 6 146 -166 2373 67 13 17 chr17 40137320 40137620 -45300860 + AluY SINE Alu 1 299 -12 2117 123 0 32 chr17 40137620 40137792 -45300688 + AluSx SINE Alu 146 305 -7 758 175 70 100 chr17 40137792 40137860 -45300620 + AluJo SINE Alu 128 197 -115 243 250 0 0 chr17 40137970 40138026 -45300454 - FRAM/FAM SINE Alu -80 86 31 299 318 30 45 chr17 40138893 40139025 -45299455 + MER5A DNA MER1_type 59 188 -1 2469 73 0 3 chr17 40139190 40139490 -45298990 - AluY SINE Alu -12 299 1 2118 100 14 0 chr17 40139606 40139886 -45298594 - AluSp SINE Alu -29 284 1 487 259 118 86 chr17 40140267 40140439 -45298041 - HAL1 LINE L1 -5 2502 2320 565 225 100 0 chr17 40140439 40140559 -45297921 - FLAM_A SINE Alu -1 132 1 487 259 118 86 chr17 40140559 40140606 -45297874 - HAL1 LINE L1 -187 2320 2276 860 107 91 0 chr17 40140606 40140727 -45297753 + AluSx SINE Alu 1 132 -180 1733 109 4 0 chr17 40140730 40140959 -45297521 + AluSp SINE Alu 1 230 -83 1401 103 0 20 chr17 40141061 40141256 -45297224 + AluSx SINE Alu 111 301 -9 1502 197 155 33 chr17 40141333 40141616 -45296864 + MER20B DNA MER1_type 275 522 -261 2257 129 0 3 chr17 40141616 40141925 -45296555 - AluSq SINE Alu -5 308 1 1502 197 155 33 chr17 40141925 40142062 -45296418 + MER20B DNA MER1_type 522 641 -142 1565 204 11 11 chr17 40142062 40142341 -45296139 + AluJo SINE Alu 1 279 -33 1502 197 155 33 chr17 40142341 40142371 -45296109 + MER20B DNA MER1_type 641 781 -2 756 99 20 0 chr17 40142398 40142499 -45295981 + AluSg SINE Alu 1 103 -207 972 252 21 99 chr17 40142610 40142820 -45295660 + HAL1 LINE L1 1319 1544 -963 2093 87 0 4 chr17 40142820 40143084 -45295396 + AluSg1 SINE Alu 36 298 -11 1534 137 126 11 chr17 40143086 40143349 -45295131 + AluSg1 SINE Alu 1 293 -16 972 252 21 99 chr17 40143349 40143422 -45295058 + HAL1 LINE L1 1545 1622 -885 1918 121 0 36 chr17 40143422 40143729 -45294751 + AluSx SINE Alu 1 296 -16 972 252 21 99 chr17 40143729 40143818 -45294662 + HAL1 LINE L1 1622 1659 -848 2558 66 3 3 chr17 40143818 40144122 -45294358 + AluSp SINE Alu 1 304 -9 972 252 21 99 chr17 40144122 40144177 -45294303 + HAL1 LINE L1 1659 1717 -790 278 194 77 106 chr17 40144173 40144343 -45294137 + HAL1 LINE L1 1935 2099 -408 * 2212 60 81 7 chr17 40144497 40144781 -45293699 + AluY SINE Alu 1 305 -6 948 84 0 0 chr17 40144893 40145012 -45293468 + AluSg/x SINE Alu 187 305 -7 356 310 14 35 chr17 40145013 40145158 -45293322 + MER5A DNA MER1_type 44 185 -4 1918 171 0 16 chr17 40145296 40145612 -45292868 - AluJb SINE Alu -1 311 1 1499 155 0 40 chr17 40145628 40145880 -45292600 - AluSx SINE Alu -5 307 66 699 224 99 0 chr17 40145905 40146057 -45292423 + MIR SINE MIR 57 223 -39 263 120 0 60 chr17 40146068 40146118 -45292362 - AluSx SINE Alu -229 73 27 1501 161 75 101 chr17 40146533 40146949 -45291531 + Tigger2 DNA MER2_type 2 2690 -28 2108 141 3 0 chr17 40146953 40147259 -45291221 - AluSx SINE Alu -5 307 1 2112 104 7 4 chr17 40147266 40147590 -45290890 - AluY SINE Alu 0 325 1 672 315 5 15 chr17 40147620 40147817 -45290663 + MIR SINE MIR 19 213 -49 1764 146 13 52 chr17 40147826 40148134 -45290346 - AluJo SINE Alu -15 297 2 29 60 0 0 chr17 40148294 40148344 -45290136 + AT_rich Low_complexity Low_complexity 1 50 0 2145 125 3 0 chr17 40148351 40148647 -45289833 + AluSg SINE Alu 1 297 -13 2223 111 0 19 chr17 40148649 40148965 -45289515 + AluSg SINE Alu 1 310 0 2241 71 0 55 chr17 40149175 40149485 -45288995 + AluSg SINE Alu 1 293 -17 282 133 0 0 chr17 40149591 40149636 -45288844 - AluSp SINE Alu -110 193 149 2660 176 64 107 chr17 40149645 40150240 -45288240 + L1MA9 LINE L1 5486 6105 -207 2207 109 7 0 chr17 40150240 40150533 -45287947 + AluSg SINE Alu 1 295 -15 2660 176 64 107 chr17 40150533 40150550 -45287930 + L1MA9 LINE L1 6105 6121 -191 1553 168 7 67 chr17 40150550 40150695 -45287785 + AluJo SINE Alu 1 122 -190 2331 109 6 0 chr17 40150695 40151006 -45287474 + AluSp SINE Alu 1 313 0 1553 168 7 67 chr17 40151006 40151145 -45287335 + AluJo SINE Alu 122 268 -44 2660 176 64 107 chr17 40151145 40151372 -45287108 + L1MA9 LINE L1 6121 6290 -22 22 0 0 0 chr17 40151518 40151540 -45286940 + GC_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr17 40151808 40151835 -45286645 + (CGG)n Simple_repeat Simple_repeat 3 29 0 2210 117 0 0 chr17 40153293 40153610 -45284870 + AluSx SINE Alu 1 317 0 230 189 19 19 chr17 40153610 40153663 -45284817 + MLT1G1 LTR MaLR 533 585 -10 613 302 151 0 chr17 40153682 40154033 -45284447 - L2 LINE L2 -1122 2192 1789 1844 160 0 40 chr17 40154149 40154474 -45284006 + AluSx SINE Alu 1 312 0 2104 105 41 3 chr17 40154478 40154772 -45283708 + AluY SINE Alu 1 305 -6 370 173 0 12 chr17 40154776 40154857 -45283623 + MLT1C LTR MaLR 186 265 -202 643 177 27 0 chr17 40154858 40155005 -45283475 - L1MB4 LINE L1 -13 6167 6017 1651 91 5 0 chr17 40155106 40155316 -45283164 - AluSg SINE Alu -99 211 1 640 208 58 0 chr17 40155317 40155437 -45283043 - FLAM_A SINE Alu -6 127 1 2513 57 0 0 chr17 40155437 40155776 -45282704 - AluY SINE Alu 0 311 1 539 225 141 121 chr17 40155877 40156092 -45282388 - HAL1 LINE L1 -1845 662 453 2298 110 0 7 chr17 40156092 40156402 -45282078 - AluSx SINE Alu -4 308 1 539 225 141 121 chr17 40156402 40156469 -45282011 - HAL1 LINE L1 -2054 453 389 2105 125 0 10 chr17 40156469 40156765 -45281715 - AluSx SINE Alu -14 298 6 539 225 141 121 chr17 40156765 40156984 -45281496 - HAL1 LINE L1 -2118 389 150 1497 148 18 11 chr17 40157085 40157369 -45281111 + L1MC3 LINE L1 7470 7755 -30 207 0 0 0 chr17 40157385 40157408 -45281072 + (TTG)n Simple_repeat Simple_repeat 2 24 0 277 343 0 35 chr17 40159184 40159387 -45279093 + G-rich Low_complexity Low_complexity 1 195 0 1010 206 11 38 chr17 40159638 40159878 -45278602 - L1M4 LINE L1 -957 5189 4955 2451 81 0 0 chr17 40159878 40160174 -45278306 - AluY SINE Alu -15 296 1 1010 206 11 38 chr17 40160174 40160195 -45278285 - L1M4 LINE L1 -1191 4955 4935 1122 130 0 0 chr17 40160232 40160411 -45278069 - AluSg/x SINE Alu 0 310 132 193 277 31 15 chr17 40160459 40160524 -45277956 - L2 LINE L2 -2484 830 765 216 358 106 23 chr17 40160578 40160796 -45277684 - L2 LINE L2 -2783 531 296 2480 74 0 10 chr17 40161390 40161700 -45276780 + AluY SINE Alu 1 307 -4 802 197 0 21 chr17 40161745 40161887 -45276593 + AluJo SINE Alu 3 141 -171 29 0 0 0 chr17 40161987 40162016 -45276464 + AT_rich Low_complexity Low_complexity 1 29 0 2226 111 7 0 chr17 40162018 40162316 -45276164 + AluSp SINE Alu 1 300 -13 490 185 8 77 chr17 40162316 40162362 -45276118 + L1ME3 LINE L1 5930 5978 -184 2554 67 0 6 chr17 40162362 40162674 -45275806 + AluY SINE Alu 1 310 -1 490 185 8 77 chr17 40162674 40162757 -45275723 + L1ME3 LINE L1 5978 6050 -112 766 70 6 187 chr17 40162757 40162928 -45275552 + AluSg/x SINE Alu 131 270 -40 198 0 0 0 chr17 40162929 40162951 -45275529 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 260 290 56 9 chr17 40162952 40163059 -45275421 + L1ME3 LINE L1 6039 6150 -12 2254 114 0 0 chr17 40163130 40163429 -45275051 + AluSx SINE Alu 1 299 -13 694 152 0 0 chr17 40163739 40163844 -45274636 + FRAM SINE Alu 51 155 -21 1907 150 7 10 chr17 40163846 40164146 -45274334 + AluSx SINE Alu 1 299 -13 2170 101 47 3 chr17 40164281 40164579 -45273901 + AluY SINE Alu 1 311 0 1390 187 99 90 chr17 40164678 40165133 -45273347 + LTR64 LTR ERVK 1 459 -99 407 167 17 0 chr17 40165133 40165193 -45273287 + AluS SINE Alu 2 62 -256 2451 74 7 7 chr17 40165295 40165593 -45272887 + AluSg SINE Alu 1 298 -12 618 224 22 72 chr17 40165593 40165678 -45272802 - L2 LINE L2 -912 2402 2314 2189 61 24 30 chr17 40165678 40165973 -45272507 + AluY SINE Alu 1 293 -18 618 224 22 72 chr17 40165973 40166110 -45272370 - L2 LINE L2 -1000 2314 2191 1607 149 18 39 chr17 40166110 40166392 -45272088 + AluJb SINE Alu 1 276 -36 2276 76 17 0 chr17 40166743 40167032 -45271448 + AluSx SINE Alu 1 294 -18 300 263 5 70 chr17 40167716 40167902 -45270578 + C-rich Low_complexity Low_complexity 2 175 0 289 209 47 12 chr17 40168192 40168324 -45270156 + (CGGGG)n Simple_repeat Simple_repeat 1 136 0 204 97 0 0 chr17 40168378 40168409 -45270071 + (CGG)n Simple_repeat Simple_repeat 2 32 0 706 78 0 39 chr17 40168649 40168752 -45269728 + AluSg/x SINE Alu 196 294 -16 1627 167 39 3 chr17 40169035 40169317 -45269163 + AluJo SINE Alu 9 300 -12 819 53 0 0 chr17 40169858 40169971 -45268509 + (CA)n Simple_repeat Simple_repeat 2 114 0 214 243 14 14 chr17 40170157 40170227 -45268253 + (CGG)n Simple_repeat Simple_repeat 1 70 0 25 65 0 0 chr17 40170333 40170379 -45268101 + GC_rich Low_complexity Low_complexity 1 46 0 372 264 215 0 chr17 40170925 40171069 -45267411 + MIR SINE MIR 78 252 -10 344 327 18 70 chr17 40171740 40172030 -45266450 - L2 LINE L2 -17 3255 2925 2030 141 0 34 chr17 40172030 40172147 -45266333 + AluSx SINE Alu 1 120 -192 2420 56 0 43 chr17 40172147 40172452 -45266028 + AluY SINE Alu 1 292 -19 2030 141 0 34 chr17 40172452 40172654 -45265826 + AluSx SINE Alu 120 309 -3 411 146 0 0 chr17 40172818 40172873 -45265607 + AluSg/x SINE Alu 214 268 -44 418 245 216 29 chr17 40173389 40173597 -45264883 - MIR SINE MIR -8 254 8 978 119 0 0 chr17 40174156 40174290 -45264190 + FLAM_C SINE Alu 10 143 0 2137 145 0 0 chr17 40174334 40174637 -45263843 - AluSx SINE Alu -3 309 7 1383 83 0 33 chr17 40175478 40175659 -45262821 - AluSg/x SINE Alu -18 292 118 715 135 18 0 chr17 40175659 40175770 -45262710 - AluSg/x SINE Alu -14 298 186 26 0 0 0 chr17 40176052 40176078 -45262402 + AT_rich Low_complexity Low_complexity 1 26 0 2097 117 32 16 chr17 40176083 40176391 -45262089 - AluSq SINE Alu 0 313 1 608 189 63 0 chr17 40176412 40176523 -45261957 - FLAM_C SINE Alu -15 118 1 605 98 0 0 chr17 40177375 40177457 -45261023 - AluSp/q SINE Alu -16 297 216 737 154 0 18 chr17 40177590 40177700 -45260780 + FLAM_A SINE Alu 9 116 -26 2267 110 3 3 chr17 40177711 40178012 -45260468 - AluSx SINE Alu -11 301 1 1502 112 25 0 chr17 40178171 40178398 -45260082 - AluSg/x SINE Alu 0 314 83 2299 71 44 10 chr17 40178629 40178926 -45259554 - AluSg SINE Alu -3 307 1 2374 62 6 52 chr17 40179263 40179587 -45258893 - AluY SINE Alu -2 309 1 1467 146 120 26 chr17 40180708 40180975 -45257505 - AluJb SINE Alu -20 292 1 26 30 0 0 chr17 40181230 40181263 -45257217 + AT_rich Low_complexity Low_complexity 1 33 0 2245 92 0 7 chr17 40181363 40181655 -45256825 - AluSc SINE Alu -19 290 1 720 180 0 0 chr17 40181804 40181915 -45256565 + AluJb SINE Alu 183 293 -19 27 29 0 0 chr17 40181928 40181962 -45256518 + AT_rich Low_complexity Low_complexity 1 34 0 914 142 0 0 chr17 40181981 40182108 -45256372 - AluSq/x SINE Alu -179 133 7 219 278 10 72 chr17 40182186 40182283 -45256197 + MER5A DNA MER1_type 93 183 -6 * 327 361 38 19 chr17 40182279 40182437 -45256043 - L2 LINE L2 -616 2698 2538 268 203 0 78 chr17 40182477 40182541 -45255939 - Tigger5 DNA MER2_type 0 2323 2265 250 211 19 0 chr17 40182557 40182609 -45255871 - Tigger5 DNA MER2_type -2131 192 140 2261 97 10 10 chr17 40182612 40182921 -45255559 - AluSg SINE Alu -1 309 1 782 142 24 24 chr17 40182942 40183069 -45255411 - FLAM_C SINE Alu -16 127 1 529 167 22 0 chr17 40183071 40183161 -45255319 - Tigger5 DNA MER2_type -2231 92 1 212 350 60 47 chr17 40183321 40183540 -45254940 - L2 LINE L2 -635 2679 2451 1615 179 7 30 chr17 40183540 40183842 -45254638 + AluJb SINE Alu 1 295 -17 212 350 60 47 chr17 40183842 40184008 -45254472 - L2 LINE L2 -863 2451 2289 2121 121 17 0 chr17 40184554 40184843 -45253637 - AluSx SINE Alu -18 294 1 1874 128 85 0 chr17 40185078 40185359 -45253121 - AluSx SINE Alu -7 305 1 518 244 63 0 chr17 40185468 40185595 -45252885 - FLAM_A SINE Alu -7 135 1 339 53 0 4 chr17 40185907 40186115 -45252365 + AluY SINE Alu 1 299 -1 1699 168 46 0 chr17 40186282 40186567 -45251913 + AluJo SINE Alu 1 298 -14 321 26 0 0 chr17 40186591 40186629 -45251851 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 279 207 17 chr17 40186657 40186836 -45251644 - L2 LINE L2 -2156 1158 946 2434 76 3 3 chr17 40186915 40187219 -45251261 + AluY SINE Alu 1 304 -7 282 180 0 33 chr17 40187221 40187282 -45251198 - L1MB8 LINE L1 -10 6168 6110 1239 155 13 71 chr17 40187293 40187386 -45251094 + AluJo SINE Alu 21 118 -194 1825 188 3 3 chr17 40187386 40187695 -45250785 - AluSx SINE Alu -3 309 1 1239 155 13 71 chr17 40187695 40187840 -45250640 + AluJo SINE Alu 118 245 -67 2293 87 10 3 chr17 40188866 40189164 -45249316 - AluSg SINE Alu -10 300 1 876 86 0 135 chr17 40189164 40189318 -45249162 - AluSg1 SINE Alu -174 135 2 242 200 316 0 chr17 40190402 40190497 -45247983 + MIR SINE MIR 20 144 -64 2223 106 0 3 chr17 40191597 40191900 -45246580 + AluSx SINE Alu 1 302 -10 435 232 11 0 chr17 40191903 40191998 -45246482 + MIR SINE MIR 47 142 -66 2274 101 0 0 chr17 40192111 40192419 -45246061 - AluSx SINE Alu -4 308 1 1979 115 14 0 chr17 40193049 40193351 -45245129 - AluSx SINE Alu 0 306 1 949 200 60 0 chr17 40193456 40193656 -45244824 + MER63B DNA MER1_type 1 212 -224 1895 132 0 67 chr17 40193673 40193824 -45244656 + AluSx SINE Alu 1 161 -151 1959 109 0 0 chr17 40193824 40194089 -45244391 + AluSg SINE Alu 46 310 0 1895 132 0 67 chr17 40194089 40194255 -45244225 + AluSx SINE Alu 161 337 25 2172 91 3 39 chr17 40194255 40194562 -45243918 + AluSx SINE Alu 1 296 -16 2866 9 0 0 chr17 40194562 40194880 -45243600 + AluYb8 SINE Alu 1 318 0 2161 106 13 19 chr17 40195293 40195605 -45242875 - AluSg SINE Alu 0 310 1 1954 109 4 7 chr17 40196959 40197235 -45241245 - AluSq SINE Alu -37 276 2 21 0 0 0 chr17 40197553 40197574 -45240906 + AT_rich Low_complexity Low_complexity 1 21 0 2334 112 0 0 chr17 40198090 40198402 -45240078 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 40199168 40199189 -45239291 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 40199749 40199772 -45238708 + GC_rich Low_complexity Low_complexity 1 23 0 466 188 8 8 chr17 40201204 40201321 -45237159 + CT-rich Low_complexity Low_complexity 2 118 0 1810 82 114 0 chr17 40202419 40202699 -45235781 + AluSq SINE Alu 1 312 -1 2351 61 7 3 chr17 40203415 40203712 -45234768 + AluSc SINE Alu 1 298 -11 1412 116 123 126 chr17 40203943 40204245 -45234235 + AluJo SINE Alu 1 301 -1 2177 82 13 7 chr17 40205889 40206193 -45232287 + AluY SINE Alu 2 307 -4 279 0 0 0 chr17 40206271 40206302 -45232178 + (TG)n Simple_repeat Simple_repeat 2 32 0 753 111 0 0 chr17 40206337 40206436 -45232044 - AluSq/x SINE Alu -177 135 37 456 156 43 106 chr17 40206469 40206503 -45231977 - MER20B DNA MER1_type 0 783 748 1449 201 24 24 chr17 40206503 40206801 -45231679 - AluJo SINE Alu -14 298 1 456 156 43 106 chr17 40206801 40206907 -45231573 - MER20B DNA MER1_type -35 748 652 1451 178 123 0 chr17 40207123 40207399 -45231081 - AluJb SINE Alu -2 310 1 2100 103 0 17 chr17 40207494 40207796 -45230684 - AluSx SINE Alu -15 297 1 560 204 42 110 chr17 40208403 40208525 -45229955 - MER5B DNA MER1_type 0 178 49 2146 117 13 0 chr17 40208525 40208834 -45229646 - AluSq SINE Alu 0 313 1 1912 127 31 10 chr17 40208838 40209130 -45229350 - AluSx SINE Alu -14 298 1 560 204 42 110 chr17 40209130 40209193 -45229287 - MER5B DNA MER1_type -132 46 1 2086 87 0 7 chr17 40211388 40211665 -45226815 + AluSx SINE Alu 24 298 -14 757 198 60 44 chr17 40211711 40211893 -45226587 + MER5A DNA MER1_type 5 189 0 2048 113 17 3 chr17 40211960 40212261 -45226219 + AluSx SINE Alu 1 305 -7 273 75 0 0 chr17 40215096 40215136 -45223344 + (CA)n Simple_repeat Simple_repeat 2 41 0 389 336 12 12 chr17 40215728 40215888 -45222592 - MIR3 SINE MIR -7 201 41 308 213 8 57 chr17 40216080 40216202 -45222278 + (CGGGG)n Simple_repeat Simple_repeat 3 118 0 21 0 0 0 chr17 40216327 40216348 -45222132 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 40216376 40216406 -45222074 + GC_rich Low_complexity Low_complexity 1 30 0 27 73 0 0 chr17 40216784 40216839 -45221641 + GC_rich Low_complexity Low_complexity 1 55 0 230 270 144 9 chr17 40218066 40218177 -45220303 + L2 LINE L2 3145 3270 -2 261 297 0 0 chr17 40218819 40218954 -45219526 + CT-rich Low_complexity Low_complexity 1 135 0 2234 108 0 0 chr17 40219767 40220072 -45218408 + AluSx SINE Alu 1 305 -7 627 232 100 26 chr17 40220120 40220310 -45218170 + MIR SINE MIR 11 214 -48 1787 155 3 50 chr17 40221207 40221530 -45216950 + AluJb SINE Alu 1 308 -4 180 309 148 12 chr17 40221608 40221689 -45216791 + MIR3 SINE MIR 6 97 -111 626 164 8 0 chr17 40222544 40222666 -45215814 + CT-rich Low_complexity Low_complexity 3 125 0 256 232 20 0 chr17 40222684 40222783 -45215697 + CT-rich Low_complexity Low_complexity 2 102 0 374 267 38 9 chr17 40224496 40224601 -45213879 + MIR SINE MIR 34 141 -121 233 265 169 0 chr17 40227286 40227369 -45211111 + MIR SINE MIR 51 147 -61 1966 96 11 11 chr17 40228915 40229196 -45209284 - AluSx SINE Alu -13 299 19 259 204 171 68 chr17 40229250 40229338 -45209142 + MIR SINE MIR 57 153 -109 1831 129 3 35 chr17 40229440 40229585 -45208895 - AluSg SINE Alu -33 277 144 2285 68 3 3 chr17 40229585 40229879 -45208601 - AluY SINE Alu -17 294 1 1831 129 3 35 chr17 40229879 40230019 -45208461 - AluSg SINE Alu -166 144 1 1120 69 7 0 chr17 40230020 40230164 -45208316 - AluSp SINE Alu -167 146 2 241 337 21 11 chr17 40231099 40231194 -45207286 + MIR SINE MIR 58 153 -109 236 339 91 43 chr17 40231525 40231711 -45206769 + L2 LINE L2 3017 3211 -61 249 254 32 0 chr17 40231771 40231834 -45206646 - L2 LINE L2 0 3313 3249 1713 147 0 97 chr17 40231867 40231992 -45206488 + AluJb SINE Alu 1 137 -165 2181 89 7 3 chr17 40231992 40232283 -45206197 - AluSx SINE Alu -16 296 5 1713 147 0 97 chr17 40232283 40232298 -45206182 + AluJb SINE Alu 137 152 -150 2208 88 7 0 chr17 40232298 40232594 -45205886 - AluSp SINE Alu -15 298 1 1713 147 0 97 chr17 40232594 40232771 -45205709 + AluJb SINE Alu 152 288 -14 593 342 31 5 chr17 40232926 40233122 -45205358 + MIR SINE MIR 36 236 -26 708 161 3 17 chr17 40233702 40234061 -45204419 + (CA)n Simple_repeat Simple_repeat 1 353 0 620 148 0 24 chr17 40234072 40234241 -45204239 + (CA)n Simple_repeat Simple_repeat 1 165 0 437 279 12 99 chr17 40234382 40234492 -45203988 + MIR SINE MIR 67 158 -104 2134 97 7 13 chr17 40234492 40234792 -45203688 - AluSx SINE Alu -14 298 1 437 279 12 99 chr17 40234792 40234853 -45203627 + MIR SINE MIR 158 223 -39 262 296 3 50 chr17 40235659 40235933 -45202547 + C-rich Low_complexity Low_complexity 1 261 0 1832 54 0 0 chr17 40239008 40239230 -45199250 + AluY SINE Alu 90 311 0 2066 106 3 3 chr17 40239247 40239540 -45198940 + AluSg SINE Alu 1 293 -17 2357 97 3 0 chr17 40239542 40239842 -45198638 + AluSp SINE Alu 1 301 -12 2369 59 0 21 chr17 40239843 40240130 -45198350 + AluY SINE Alu 2 313 0 247 32 0 0 chr17 40240130 40240161 -45198319 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2228 124 7 0 chr17 40240162 40240460 -45198020 + AluSx SINE Alu 1 300 -12 698 199 85 0 chr17 40240475 40240656 -45197824 + MIR SINE MIR 57 251 -11 1197 174 29 92 chr17 40240734 40240865 -45197615 + AluJo SINE Alu 3 141 -161 2583 77 0 0 chr17 40240865 40241176 -45197304 + AluY SINE Alu 1 311 0 1197 174 29 92 chr17 40241176 40241274 -45197206 + AluJo SINE Alu 141 244 -58 2127 136 0 16 chr17 40241274 40241411 -45197069 + AluSx SINE Alu 1 139 -173 2225 85 41 3 chr17 40241411 40241704 -45196776 + AluSq SINE Alu 1 304 -9 2127 136 0 16 chr17 40241704 40241874 -45196606 + AluSx SINE Alu 139 303 -9 2275 100 0 32 chr17 40241881 40242191 -45196289 + AluY SINE Alu 1 300 -11 1197 174 29 92 chr17 40242191 40242268 -45196212 + AluJo SINE Alu 250 298 -4 218 239 42 14 chr17 40242317 40242388 -45196092 + L2 LINE L2 2952 3024 -248 1697 186 7 20 chr17 40242414 40242579 -45195901 - AluJb SINE Alu -13 299 138 2381 88 3 0 chr17 40242579 40242876 -45195604 - AluSp SINE Alu -13 300 3 1697 186 7 20 chr17 40242876 40243011 -45195469 - AluJb SINE Alu -174 138 3 233 299 219 25 chr17 40243132 40243333 -45195147 - L2 LINE L2 -246 3067 2828 302 336 117 42 chr17 40243439 40243722 -45194758 + L2 LINE L2 2946 3249 -23 361 293 127 44 chr17 40243802 40243983 -45194497 - MIR SINE MIR -44 218 23 783 154 86 12 chr17 40244425 40244587 -45193893 + MER5B DNA MER1_type 1 174 -4 345 47 0 0 chr17 40244807 40244850 -45193630 + (CGG)n Simple_repeat Simple_repeat 2 44 0 908 128 0 0 chr17 40245588 40245721 -45192759 - FLAM_C SINE Alu 0 133 1 1638 177 3 47 chr17 40245832 40246018 -45192462 - AluJb SINE Alu -4 308 140 510 17 0 0 chr17 40246018 40246077 -45192403 + (TA)n Simple_repeat Simple_repeat 2 60 0 1638 177 3 47 chr17 40246077 40246212 -45192268 - AluJb SINE Alu -172 140 1 2246 79 0 26 chr17 40246221 40246526 -45191954 - AluY SINE Alu -14 297 1 2138 129 0 11 chr17 40246897 40247207 -45191273 + AluSx SINE Alu 1 307 0 365 320 16 8 chr17 40250355 40250483 -45187997 - MIR3 SINE MIR -8 200 72 2231 111 7 3 chr17 40250524 40250821 -45187659 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 40254008 40254032 -45184448 + (TG)n Simple_repeat Simple_repeat 1 24 0 1788 142 16 62 chr17 40255178 40255487 -45182993 + AluSx SINE Alu 1 295 -17 2201 118 0 7 chr17 40255488 40255785 -45182695 + AluSx SINE Alu 1 295 -17 910 207 6 0 chr17 40255899 40256057 -45182423 + AluSg/x SINE Alu 136 295 -10 2282 116 0 0 chr17 40256057 40256375 -45182105 + AluYb8 SINE Alu 1 318 0 2321 102 7 0 chr17 40256386 40256681 -45181799 + AluSc SINE Alu 1 297 -12 24 32 0 0 chr17 40256728 40256759 -45181721 + AT_rich Low_complexity Low_complexity 1 31 0 561 162 144 9 chr17 40256766 40256877 -45181603 - FLAM_C SINE Alu -16 127 2 379 216 60 37 chr17 40256898 40257032 -45181448 + MER63 DNA MER1_type 925 1061 0 2516 63 0 10 chr17 40257384 40257683 -45180797 - AluY SINE Alu -15 296 1 2482 80 7 0 chr17 40257683 40257985 -45180495 - AluSx SINE Alu -8 304 1 224 281 16 0 chr17 40258000 40258064 -45180416 + L2 LINE L2 2995 3059 -213 437 322 54 41 chr17 40258208 40258450 -45180030 - L2 LINE L2 -8 3264 3020 409 205 123 76 chr17 40259245 40259312 -45179168 + MER5A DNA MER1_type 9 71 -118 910 203 18 0 chr17 40259312 40259475 -45179005 + FAM SINE Alu 1 166 -9 409 205 123 76 chr17 40259475 40259578 -45178902 + MER5A DNA MER1_type 71 187 -2 1241 93 12 0 chr17 40259578 40259740 -45178740 + AluSq SINE Alu 135 298 -15 227 220 193 28 chr17 40260795 40260904 -45177576 + MIR SINE MIR 136 262 0 26 50 0 0 chr17 40261288 40261328 -45177152 + GC_rich Low_complexity Low_complexity 1 40 0 266 300 70 0 chr17 40261510 40261610 -45176870 - MER91A DNA MER1_type 0 196 90 224 253 100 80 chr17 40261614 40261764 -45176716 - MER91A DNA MER1_type -25 171 19 522 0 0 0 chr17 40264053 40264111 -45174369 + (TG)n Simple_repeat Simple_repeat 2 59 0 1996 111 46 0 chr17 40265595 40265875 -45172605 + AluSx SINE Alu 1 293 -19 2264 81 0 18 chr17 40266139 40266449 -45172031 - AluY SINE Alu 0 305 1 696 296 26 75 chr17 40266511 40266631 -45171849 + L2 LINE L2 2319 2443 -871 2093 114 7 0 chr17 40266631 40266902 -45171578 - AluSx SINE Alu -39 273 1 696 296 26 75 chr17 40266902 40267197 -45171283 + L2 LINE L2 2443 2714 -600 477 135 4 3 chr17 40267198 40267421 -45171059 + AluJo SINE Alu 2 302 -10 396 155 0 0 chr17 40267429 40267500 -45170980 + GA-rich Low_complexity Low_complexity 4 74 0 649 242 38 0 chr17 40267502 40267659 -45170821 + L1ME3 LINE L1 5732 5894 -268 1947 155 3 22 chr17 40267659 40267717 -45170763 + AluJo SINE Alu 1 59 -253 5137 74 36 78 chr17 40267717 40268579 -45169901 + LTR12 LTR ERV1 1 826 0 1947 155 3 22 chr17 40268579 40268661 -45169819 + AluJo SINE Alu 59 141 -171 1790 175 3 10 chr17 40268661 40268797 -45169683 + AluJb SINE Alu 1 136 -176 2343 79 17 0 chr17 40268797 40269089 -45169391 + AluSp SINE Alu 1 297 -16 2228 103 0 10 chr17 40269089 40269390 -45169090 + AluSg1 SINE Alu 1 298 -11 1790 175 3 10 chr17 40269390 40269555 -45168925 + AluJb SINE Alu 134 301 -11 1947 155 3 22 chr17 40269555 40269729 -45168751 + AluJo SINE Alu 141 310 -2 2164 101 0 24 chr17 40269729 40270026 -45168454 + AluSc SINE Alu 1 290 -19 2507 51 0 0 chr17 40270026 40270322 -45168158 + AluY SINE Alu 1 296 -15 1619 109 5 0 chr17 40270326 40270536 -45167944 + AluSp SINE Alu 1 211 -102 235 26 0 0 chr17 40270816 40270854 -45167626 - Alu SINE Alu 0 300 263 461 341 0 0 chr17 40270943 40271078 -45167402 - L2 LINE L2 -316 2997 2863 2246 93 3 27 chr17 40271974 40272274 -45166206 + AluSx SINE Alu 1 293 -19 650 85 0 11 chr17 40272478 40272572 -45165908 - HY4 scRNA scRNA 0 93 1 1077 93 0 14 chr17 40273093 40273232 -45165248 + AluSq/x SINE Alu 1 137 -175 511 95 0 14 chr17 40273239 40273313 -45165167 + tRNA-Arg-CGA tRNA tRNA 1 73 -3 2315 83 0 0 chr17 40273321 40273598 -45164882 + AluSx SINE Alu 1 277 -35 180 0 0 0 chr17 40273603 40273623 -45164857 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1224 209 0 97 chr17 40273628 40273948 -45164532 + AluJo SINE Alu 2 290 -12 2253 74 32 0 chr17 40274090 40274373 -45164107 + AluY SINE Alu 1 292 -19 1032 146 0 30 chr17 40274373 40274538 -45163942 + AluSq SINE Alu 134 293 -20 750 244 104 0 chr17 40274873 40275094 -45163386 + MIR SINE MIR 17 260 -2 939 160 17 6 chr17 40275231 40275406 -45163074 + MER5A DNA MER1_type 13 189 0 1602 177 35 7 chr17 40275436 40275719 -45162761 - AluJb SINE Alu -21 291 1 2277 80 23 17 chr17 40276095 40276394 -45162086 - AluSx SINE Alu -9 303 3 257 321 37 9 chr17 40276597 40276706 -45161774 + MIR3 SINE MIR 96 207 -1 1003 84 7 0 chr17 40278391 40278534 -45159946 - L1PA16 LINE L1 -9 6157 6014 203 111 0 44 chr17 40278676 40278721 -45159759 + (GGGAGA)n Simple_repeat Simple_repeat 6 48 0 1761 136 21 0 chr17 40279155 40279397 -45159083 - AluSx SINE Alu -65 247 1 473 345 0 7 chr17 40279427 40279569 -45158911 - MER115 DNA AcHobo -413 280 140 2433 88 7 0 chr17 40280559 40280864 -45157616 + AluSp SINE Alu 1 307 -6 2321 98 7 0 chr17 40282032 40282337 -45156143 + AluY SINE Alu 1 307 -4 744 181 14 100 chr17 40282571 40282781 -45155699 - AluJo SINE Alu -119 193 2 234 128 0 0 chr17 40283253 40283292 -45155188 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 2139 148 0 0 chr17 40283781 40284091 -45154389 + AluSx SINE Alu 1 310 -2 1146 159 0 0 chr17 40284091 40284261 -45154219 + AluSg/x SINE Alu 134 303 -9 210 71 0 0 chr17 40284318 40284346 -45154134 + (A)n Simple_repeat Simple_repeat 1 28 0 2312 95 7 3 chr17 40284548 40284854 -45153626 + AluSg1 SINE Alu 1 307 -2 1619 189 7 14 chr17 40285913 40286210 -45152270 - AluJo SINE Alu -12 300 6 344 272 117 33 chr17 40286244 40286457 -45152023 + L2 LINE L2 2831 3061 -252 1919 129 18 14 chr17 40286549 40286858 -45151622 + AluSx SINE Alu 1 310 0 2273 87 21 0 chr17 40286864 40287153 -45151327 + AluSp SINE Alu 1 295 -18 941 173 27 0 chr17 40287153 40287303 -45151177 + AluJb SINE Alu 83 236 -76 1485 199 78 0 chr17 40287363 40287645 -45150835 + AluJo SINE Alu 1 304 -8 385 141 11 98 chr17 40287645 40287737 -45150743 + L2 LINE L2 3230 3313 0 544 225 39 0 chr17 40287762 40287891 -45150589 + L1MC/D LINE L1 5621 5754 -2054 2842 23 0 0 chr17 40287955 40288265 -45150215 + AluYa5 SINE Alu 1 310 -1 677 249 169 52 chr17 40289019 40289344 -45149136 + L2 LINE L2 2902 3264 -8 267 309 125 0 chr17 40289757 40289882 -45148598 + MIR SINE MIR 23 147 -61 2275 109 7 0 chr17 40290098 40290391 -45148089 + AluSq SINE Alu 3 297 -16 186 191 0 0 chr17 40292632 40292679 -45145801 + GA-rich Low_complexity Low_complexity 3 49 0 322 314 71 11 chr17 40294049 40294207 -45144273 + MIR SINE MIR 8 149 -59 265 281 61 35 chr17 40296955 40297069 -45141411 - MIR3 SINE MIR -8 200 84 2142 107 7 0 chr17 40297161 40297460 -45141020 + AluSx SINE Alu 2 302 -10 2256 98 0 0 chr17 40297762 40298058 -45140422 + AluSx SINE Alu 3 298 -14 2294 84 0 16 chr17 40298069 40298379 -45140101 + AluSp SINE Alu 9 313 0 1947 118 38 10 chr17 40299539 40299827 -45138653 - AluSx SINE Alu -16 296 1 227 231 0 10 chr17 40300179 40300283 -45138197 + (TG)n Simple_repeat Simple_repeat 2 104 0 315 0 0 0 chr17 40300381 40300416 -45138064 + (ACTG)n Simple_repeat Simple_repeat 4 38 0 698 239 38 0 chr17 40300866 40301025 -45137455 - MIR SINE MIR -10 252 88 1353 186 28 4 chr17 40352236 40352489 -45085991 - AluSx SINE Alu -23 289 31 8228 127 106 57 chr17 40352492 40354102 -45084378 - pTR5 LTR ERV1 0 2438 750 263 98 122 0 chr17 40354102 40354143 -45084337 - AluSx SINE Alu -257 46 1 834 107 25 0 chr17 40354316 40354438 -45084042 + BC200 scRNA scRNA 5 129 -71 2805 168 17 8 chr17 40354482 40354964 -45083516 + MER66B LTR ERV1 1 486 0 222 189 0 0 chr17 40355050 40355087 -45083393 + polypurine Low_complexity Low_complexity 3 39 0 2207 115 3 0 chr17 40355251 40355547 -45082933 - AluSx SINE Alu -15 297 1 400 103 294 0 chr17 40355604 40355672 -45082808 - 5S rRNA rRNA -32 89 2 1778 184 48 143 chr17 40355672 40355910 -45082570 - L1ME2 LINE L1 -71 6093 5834 689 48 0 0 chr17 40355910 40355994 -45082486 + AluY SINE Alu 2 85 -226 1778 184 48 143 chr17 40355994 40356281 -45082199 - L1ME2 LINE L1 -330 5834 5543 3451 47 40 5 chr17 40356336 40356765 -45081715 - MLT2A1 LTR ERVL 0 444 1 1642 162 47 87 chr17 40356846 40357315 -45081165 + LTR7 LTR ERV1 1 450 0 482 204 15 45 chr17 40358219 40358351 -45080129 + MLT1J2 LTR MaLR 36 163 -287 231 125 0 0 chr17 40358358 40358398 -45080082 + (GA)n Simple_repeat Simple_repeat 1 40 0 2261 84 40 0 chr17 40358461 40358758 -45079722 - AluSx SINE Alu -3 309 1 2131 98 24 3 chr17 40358759 40359046 -45079434 - AluSx SINE Alu -19 293 1 381 158 105 0 chr17 40359056 40359132 -45079348 + MLT1J LTR MaLR 416 499 -12 2510 57 0 10 chr17 40359132 40359432 -45079048 - AluY SINE Alu -14 297 1 398 323 62 52 chr17 40359962 40360131 -45078349 - L2 LINE L2 0 3313 3147 2121 104 11 0 chr17 40360131 40360410 -45078070 + AluSx SINE Alu 1 282 -30 459 0 0 0 chr17 40360416 40360467 -45078013 + (TG)n Simple_repeat Simple_repeat 2 52 0 398 323 62 52 chr17 40360467 40360578 -45077902 - L2 LINE L2 -170 3143 3023 23 33 0 0 chr17 40360657 40360687 -45077793 + AT_rich Low_complexity Low_complexity 1 30 0 506 195 0 0 chr17 40360690 40360777 -45077703 + AluJ/FLAM SINE Alu 2 88 -224 2036 123 0 40 chr17 40360886 40361211 -45077269 - AluSx SINE Alu 0 312 1 842 189 0 20 chr17 40361393 40361546 -45076934 + AluJb SINE Alu 141 290 -22 2184 103 14 0 chr17 40361870 40362160 -45076320 - AluSg SINE Alu -16 294 1 927 184 75 5 chr17 40362255 40362456 -45076024 - L1MC4a LINE L1 -374 7434 7220 2412 100 0 0 chr17 40362653 40362962 -45075518 - AluSg SINE Alu 0 310 2 1009 113 0 0 chr17 40362972 40363105 -45075375 - AluSq/x SINE Alu -179 133 1 2277 102 0 3 chr17 40363110 40363414 -45075066 - AluSg SINE Alu -7 303 1 2278 100 6 13 chr17 40363456 40363767 -45074713 - AluY SINE Alu -2 309 1 2217 107 7 0 chr17 40364360 40364651 -45073829 + AluSx SINE Alu 1 293 -19 973 176 0 0 chr17 40364987 40365135 -45073345 - AluJb SINE Alu -25 287 140 2115 138 0 7 chr17 40365142 40365438 -45073042 - AluSx SINE Alu -16 296 3 697 160 127 83 chr17 40365572 40365676 -45072804 - MER5A DNA MER1_type 0 189 72 2157 123 13 3 chr17 40365676 40365984 -45072496 - AluSq SINE Alu -2 311 1 697 160 127 83 chr17 40365984 40366060 -45072420 - MER5A DNA MER1_type -117 72 1 408 198 52 10 chr17 40366080 40366176 -45072304 + MER5A DNA MER1_type 10 109 -80 2352 97 0 0 chr17 40366307 40366606 -45071874 + AluSg SINE Alu 1 299 -11 391 210 198 32 chr17 40366634 40366791 -45071689 - L1MD2 LINE L1 -55 6304 6122 850 194 52 0 chr17 40366820 40366975 -45071505 - AluSg/x SINE Alu -13 299 137 311 288 137 7 chr17 40367053 40367199 -45071281 - L1M4 LINE L1 -1067 5079 4915 2349 90 0 3 chr17 40369196 40369486 -45068994 - AluSx SINE Alu -23 289 1 2243 107 10 7 chr17 40369621 40369921 -45068559 - AluSx SINE Alu -11 301 1 935 165 12 18 chr17 40370062 40370232 -45068248 - AluJo SINE Alu -24 288 120 666 78 68 10 chr17 40370232 40370335 -45068145 - HY1 scRNA scRNA -3 109 1 213 245 151 0 chr17 40370805 40370858 -45067622 + L2 LINE L2 3172 3232 -40 1287 131 135 80 chr17 40371921 40372036 -45066444 + AluJo SINE Alu 1 108 -204 2022 142 3 19 chr17 40372036 40372347 -45066133 + AluJb SINE Alu 1 306 -6 1287 131 135 80 chr17 40372347 40372505 -45065975 + AluJo SINE Alu 108 289 -23 1226 195 22 8 chr17 40372515 40372782 -45065698 + L1MB8 LINE L1 4783 5053 -1093 1938 106 0 36 chr17 40372809 40373083 -45065397 + AluSx SINE Alu 40 303 -9 552 201 93 23 chr17 40373083 40373298 -45065182 + L1MB8 LINE L1 5823 6064 -120 521 146 0 0 chr17 40373331 40373413 -45065067 - AluSg/x SINE Alu -15 294 213 182 275 0 0 chr17 40373819 40373859 -45064621 + MIR SINE MIR 36 75 -133 1529 166 64 30 chr17 40374057 40374353 -45064127 - AluJo SINE Alu -6 306 1 2349 113 0 0 chr17 40374446 40374748 -45063732 - AluSx SINE Alu -6 306 5 2390 94 3 0 chr17 40374945 40375244 -45063236 - AluSp SINE Alu -13 300 1 2120 119 34 0 chr17 40375277 40375570 -45062910 - AluSx SINE Alu -9 303 1 604 136 212 38 chr17 40376519 40376651 -45061829 - AluJb SINE Alu -20 292 138 1449 245 266 21 chr17 40378373 40378603 -45059877 - L2 LINE L2 -4 3309 3137 2221 120 3 0 chr17 40378603 40378912 -45059568 + AluSq SINE Alu 2 311 -2 1449 245 266 21 chr17 40378912 40379777 -45058703 - L2 LINE L2 -176 3137 1923 498 159 168 9 chr17 40379874 40379981 -45058499 - MER20 DNA MER1_type 0 219 96 236 227 0 0 chr17 40380628 40380672 -45057808 + L2 LINE L2 3265 3308 -5 239 318 84 19 chr17 40380922 40381076 -45057404 - L1MC/D LINE L1 -1909 5899 5736 2008 123 3 23 chr17 40382159 40382331 -45056149 - AluSq SINE Alu -9 304 130 2105 109 37 3 chr17 40382331 40382625 -45055855 - AluSp SINE Alu -9 304 1 2304 82 0 47 chr17 40382625 40382944 -45055536 - AluY SINE Alu -7 304 1 2225 108 0 0 chr17 40382944 40383241 -45055239 - AluY SINE Alu -14 297 1 2008 123 3 23 chr17 40383241 40383376 -45055104 - AluSq SINE Alu -180 133 1 2283 104 0 19 chr17 40384157 40384473 -45054007 + AluSq SINE Alu 1 310 -3 21 36 0 0 chr17 40385301 40385329 -45053151 + AT_rich Low_complexity Low_complexity 1 28 0 260 277 12 24 chr17 40386001 40386084 -45052396 - L2 LINE L2 -1 3271 3190 2439 91 3 0 chr17 40386088 40386395 -45052085 + AluSq SINE Alu 1 308 -5 926 148 16 33 chr17 40386398 40386580 -45051900 + AluSq SINE Alu 135 313 0 1982 128 0 65 chr17 40386651 40386972 -45051508 + AluSx SINE Alu 1 300 -12 2178 125 0 26 chr17 40386972 40387283 -45051197 + AluSx SINE Alu 1 303 -9 1540 149 22 22 chr17 40389127 40389396 -45049084 + AluJb SINE Alu 44 312 0 2109 104 4 4 chr17 40389538 40389845 -45048635 + AluSg SINE Alu 1 307 0 1620 118 26 138 chr17 40390717 40390927 -45047553 - AluSx SINE Alu 0 302 143 1834 139 13 30 chr17 40390927 40391228 -45047252 - AluSx SINE Alu -16 296 1 1620 118 26 138 chr17 40391228 40391357 -45047123 - AluSx SINE Alu -159 143 1 366 99 0 8 chr17 40391304 40391380 -45047100 - Alu SINE Alu -249 53 1 2144 137 0 0 chr17 40391442 40391750 -45046730 - AluJb SINE Alu -6 306 1 2458 90 0 0 chr17 40391767 40392078 -45046402 - AluY SINE Alu 0 311 1 1119 143 0 0 chr17 40392306 40392481 -45045999 - AluSg/x SINE Alu -1 311 137 2210 118 0 0 chr17 40392481 40392786 -45045694 - AluSx SINE Alu -7 305 1 336 258 0 75 chr17 40392976 40393096 -45045384 + L1ME LINE L1 5662 5771 -350 2392 71 0 0 chr17 40393355 40393651 -45044829 - AluY SINE Alu -15 296 1 411 358 34 6 chr17 40393911 40393977 -45044503 + L1MC4 LINE L1 7836 7899 -143 469 173 146 18 chr17 40393977 40394087 -45044393 + FLAM_C SINE Alu 1 124 -9 411 358 34 6 chr17 40394087 40394196 -45044284 + L1MC4 LINE L1 7899 8016 -26 209 132 26 0 chr17 40394623 40394661 -45043819 + T-rich Low_complexity Low_complexity 4 42 0 1486 159 21 31 chr17 40396779 40397107 -45041373 + AluJo SINE Alu 1 325 0 2222 109 0 6 chr17 40397424 40397735 -45040745 - AluSx SINE Alu -2 310 2 323 309 143 0 chr17 40397892 40398060 -45040420 + MIR SINE MIR 44 235 -27 2125 107 3 19 chr17 40398796 40399113 -45039367 + AluSx SINE Alu 1 312 0 2719 22 3 0 chr17 40399453 40399768 -45038712 + AluYb8 SINE Alu 1 316 -2 220 384 0 0 chr17 40399959 40400032 -45038448 + MIR SINE MIR 42 114 -148 1550 155 155 20 chr17 40400033 40400439 -45038041 - LTR54B LTR ERV1 -24 474 14 1840 128 35 0 chr17 40400439 40400721 -45037759 - AluSx SINE Alu -20 292 1 2273 74 7 3 chr17 40400733 40401030 -45037450 - AluSg SINE Alu -12 298 1 191 271 0 0 chr17 40401145 40401193 -45037287 + MIR SINE MIR 205 252 -10 233 53 53 0 chr17 40401702 40401740 -45036740 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 367 299 78 65 chr17 40401923 40402069 -45036411 + L1MC4 LINE L1 5584 5727 -404 2301 99 0 3 chr17 40402069 40402382 -45036098 - AluSx SINE Alu 0 312 1 367 299 78 65 chr17 40402382 40402723 -45035757 + L1MC4 LINE L1 5727 5974 -157 1828 137 13 29 chr17 40402750 40403057 -45035423 - AluJo SINE Alu -10 302 1 314 298 12 0 chr17 40403308 40403392 -45035088 + MIR SINE MIR 62 146 -62 2360 68 0 46 chr17 40403461 40403787 -45034693 + AluY SINE Alu 1 311 0 181 294 0 0 chr17 40405121 40405172 -45033308 + L2 LINE L2 2992 3042 -230 540 178 9 19 chr17 40405178 40405285 -45033195 - FLAM_A SINE Alu -11 131 26 1776 190 125 3 chr17 40405821 40406174 -45032306 + MSTD LTR MaLR 1 396 0 3001 64 12 111 chr17 40406918 40407421 -45031059 - MLT2A2 LTR ERVL 0 453 1 206 266 43 32 chr17 40407806 40407900 -45030580 + GA-rich Low_complexity Low_complexity 3 97 0 1944 159 0 0 chr17 40407913 40408222 -45030258 - AluY SINE Alu -2 309 1 330 236 49 35 chr17 40409034 40409178 -45029302 + (CCCA)n Simple_repeat Simple_repeat 2 147 0 305 175 125 25 chr17 40409629 40409709 -45028771 - MIR3 SINE MIR -14 194 107 205 319 0 44 chr17 40410528 40410619 -45027861 + CT-rich Low_complexity Low_complexity 6 92 0 468 210 86 43 chr17 40410737 40410899 -45027581 - MIR SINE MIR -70 192 24 708 283 60 4 chr17 40411746 40411979 -45026501 - MIR SINE MIR -1 261 16 559 260 183 24 chr17 40412002 40412210 -45026270 - MIR SINE MIR -2 260 20 377 264 210 26 chr17 40412255 40412427 -45026053 - L1ME3A LINE L1 -6 6156 6017 1791 189 53 55 chr17 40412427 40412634 -45025846 - MSTD LTR MaLR 0 396 190 2257 104 0 0 chr17 40412634 40412932 -45025548 - AluSx SINE Alu -13 299 2 1848 145 3 14 chr17 40412936 40413232 -45025248 - AluJb SINE Alu -5 307 15 1791 189 53 55 chr17 40413232 40413416 -45025064 - MSTD LTR MaLR -209 187 1 377 264 210 26 chr17 40413416 40413470 -45025010 - L1ME3A LINE L1 -145 6017 5892 647 222 266 13 chr17 40413493 40413816 -45024664 - L1ME3A LINE L1 -398 5772 5405 199 344 0 0 chr17 40414782 40414843 -45023637 + MIR SINE MIR 58 118 -90 402 301 83 0 chr17 40415020 40415153 -45023327 - MIR3 SINE MIR -3 205 62 956 235 54 0 chr17 40415691 40415912 -45022568 + MIR SINE MIR 2 234 -28 2211 91 0 3 chr17 40415931 40416229 -45022251 - AluSp SINE Alu -16 297 1 933 181 12 0 chr17 40416247 40416413 -45022067 - AluJo/FRAM SINE Alu -11 301 134 1918 149 3 13 chr17 40416413 40416721 -45021759 - AluJb SINE Alu -7 305 1 421 289 16 16 chr17 40416962 40417083 -45021397 - MIR SINE MIR -63 145 25 482 288 50 7 chr17 40417778 40417917 -45020563 + L2 LINE L2 3125 3269 -3 190 222 214 68 chr17 40418225 40418342 -45020138 - MIR SINE MIR -69 193 60 2144 118 0 0 chr17 40418380 40418686 -45019794 - AluY SINE Alu -5 306 1 492 241 40 101 chr17 40419327 40419390 -45019090 - MER91B DNA MER1_type 0 190 125 2273 102 0 3 chr17 40419390 40419694 -45018786 - AluSx SINE Alu -9 303 1 2508 61 0 0 chr17 40419695 40420006 -45018474 - AluY SINE Alu 0 311 1 1836 156 0 3 chr17 40420006 40420301 -45018179 - AluJo SINE Alu -10 302 9 492 241 40 101 chr17 40420301 40420433 -45018047 - MER91B DNA MER1_type -63 127 4 189 0 0 0 chr17 40421015 40421036 -45017444 + (CGG)n Simple_repeat Simple_repeat 3 23 0 209 180 0 49 chr17 40421049 40421110 -45017370 + C-rich Low_complexity Low_complexity 3 60 0 32 67 0 0 chr17 40421383 40421443 -45017037 + GC_rich Low_complexity Low_complexity 1 60 0 252 59 0 0 chr17 40422572 40422606 -45015874 + (GA)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr17 40422607 40422650 -45015830 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 498 17 0 0 chr17 40422649 40422708 -45015772 + (GA)n Simple_repeat Simple_repeat 2 60 0 436 201 10 88 chr17 40422918 40423112 -45015368 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 1210 164 153 19 chr17 40423785 40424053 -45014427 + AluJo SINE Alu 1 304 -8 2274 116 0 0 chr17 40424056 40424367 -45014113 + AluSx SINE Alu 1 311 -1 274 254 0 0 chr17 40425441 40425500 -45012980 + MIR SINE MIR 116 174 -88 859 141 0 0 chr17 40427062 40427189 -45011291 + FLAM_C SINE Alu 7 136 -176 2417 80 0 3 chr17 40427189 40427501 -45010979 + AluY SINE Alu 1 311 0 1717 146 31 14 chr17 40427735 40428022 -45010458 - AluJb SINE Alu -20 292 1 1728 136 45 7 chr17 40428246 40428533 -45009947 - AluJo SINE Alu 0 312 15 1914 134 0 36 chr17 40429531 40429856 -45008624 - AluJo SINE Alu 0 312 5 305 241 6 86 chr17 40431941 40432065 -45006415 - MIR SINE MIR -57 151 36 876 126 155 5 chr17 40432831 40433038 -45005442 - L1MC2 LINE L1 -5 6339 6102 852 196 36 0 chr17 40433040 40433208 -45005272 - AluJb SINE Alu -5 307 134 2131 80 3 3 chr17 40433208 40433494 -45004986 - AluSq SINE Alu -16 297 12 213 196 0 0 chr17 40434434 40434480 -45004000 + (TG)n Simple_repeat Simple_repeat 1 46 0 181 173 0 135 chr17 40434631 40434683 -45003797 - L2 LINE L2 -1 3271 3227 306 180 65 0 chr17 40436889 40437028 -45001452 + (TG)n Simple_repeat Simple_repeat 1 148 0 410 243 68 40 chr17 40439124 40439301 -44999179 + MIR SINE MIR 33 214 -48 188 195 24 0 chr17 40439326 40439367 -44999113 + MIR SINE MIR 103 144 -64 2234 102 0 0 chr17 40441241 40441545 -44996935 + AluSg SINE Alu 1 304 -6 282 116 0 0 chr17 40441863 40441906 -44996574 + (TG)n Simple_repeat Simple_repeat 1 43 0 223 290 37 65 chr17 40442017 40442124 -44996356 - MIR SINE MIR -73 135 32 711 256 223 12 chr17 40442468 40442796 -44995684 + L2 LINE L2 2917 3313 0 2082 65 79 0 chr17 40443011 40443289 -44995191 + L1PA8 LINE L1 5861 6160 -12 955 165 0 6 chr17 40443297 40443455 -44995025 + AluSg/x SINE Alu 146 302 -8 21 0 0 0 chr17 40443781 40443802 -44994678 + AT_rich Low_complexity Low_complexity 1 21 0 1263 167 83 83 chr17 40444064 40444364 -44994116 - AluJb SINE Alu 0 302 3 645 313 65 13 chr17 40444389 40444619 -44993861 + L3 LINE CR1 1336 1577 0 1856 147 23 7 chr17 40444730 40445036 -44993444 - AluJb SINE Alu -1 311 1 183 42 0 0 chr17 40445158 40445182 -44993298 + (TCTCCC)n Simple_repeat Simple_repeat 1 24 0 2170 121 0 0 chr17 40445188 40445495 -44992985 - AluSx SINE Alu -5 307 1 420 323 136 32 chr17 40445944 40446231 -44992249 + L2 LINE L2 2348 2604 -668 2142 113 10 0 chr17 40446231 40446524 -44991956 - AluSx SINE Alu -16 296 1 420 323 136 32 chr17 40446524 40446897 -44991583 + L2 LINE L2 2604 3078 -194 2382 87 0 0 chr17 40447006 40447317 -44991163 - AluY SINE Alu 0 311 1 2280 80 0 0 chr17 40447317 40447605 -44990875 - AluSg SINE Alu -14 296 9 380 186 0 12 chr17 40447677 40447763 -44990717 + MER53 DNA DNA 12 96 -93 1965 140 7 16 chr17 40447932 40448239 -44990241 - AluSx SINE Alu -8 304 1 340 300 50 33 chr17 40448293 40448413 -44990067 - HAL1 LINE L1 -1234 1273 1152 2004 125 30 0 chr17 40448417 40448720 -44989760 - AluSx SINE Alu 0 312 1 180 152 0 0 chr17 40449216 40449249 -44989231 + (CAT)n Simple_repeat Simple_repeat 3 35 0 635 227 62 6 chr17 40449256 40449432 -44989048 + MIR SINE MIR 34 219 -43 480 229 48 0 chr17 40449427 40449532 -44988948 - L2 LINE L2 -16 3256 3147 * 398 262 91 47 chr17 40449592 40449800 -44988680 - MIR SINE MIR -4 258 30 2011 134 23 0 chr17 40449805 40450104 -44988376 - AluSx SINE Alu -6 306 1 189 0 0 0 chr17 40450133 40450154 -44988326 + (TG)n Simple_repeat Simple_repeat 1 21 0 476 35 0 0 chr17 40450255 40450312 -44988168 - AluJ/FLAM SINE Alu -254 58 2 316 300 71 0 chr17 40450354 40450494 -44987986 - MARNA DNA Mariner -336 250 101 360 328 75 59 chr17 40450726 40450979 -44987501 - L2 LINE L2 -1 3271 3015 2058 136 0 3 chr17 40451019 40451329 -44987151 - AluSx SINE Alu -3 309 1 207 0 0 0 chr17 40452141 40452164 -44986316 + (A)n Simple_repeat Simple_repeat 1 23 0 2192 102 23 3 chr17 40452167 40452470 -44986010 + AluSx SINE Alu 1 309 -3 284 113 25 9 chr17 40452566 40452769 -44985711 + AluSq SINE Alu 12 301 0 998 108 0 0 chr17 40453191 40453320 -44985160 + AluSg SINE Alu 2 130 -180 2309 103 0 3 chr17 40453323 40453635 -44984845 + AluY SINE Alu 1 311 0 214 179 26 0 chr17 40453635 40453674 -44984806 + GA-rich Low_complexity Low_complexity 4 43 0 312 311 30 30 chr17 40453676 40453808 -44984672 + L1 LINE L1 3073 3204 -2942 336 248 91 0 chr17 40453978 40454099 -44984381 - MER20B DNA MER1_type -44 739 608 2297 79 3 19 chr17 40454296 40454612 -44983868 - AluY SINE Alu 0 311 1 517 232 169 24 chr17 40454614 40454707 -44983773 - MER20B DNA MER1_type -491 292 214 1797 159 0 22 chr17 40454707 40455021 -44983459 + AluJb SINE Alu 1 307 -5 517 232 169 24 chr17 40455021 40455181 -44983299 - MER20B DNA MER1_type -569 214 2 919 209 51 33 chr17 40455226 40455441 -44983039 - MER20B DNA MER1_type 0 219 1 184 326 0 34 chr17 40455558 40455647 -44982833 - L2 LINE L2 -165 3107 3022 988 206 5 5 chr17 40455757 40455980 -44982500 + Charlie5 DNA MER1_type 2363 2585 -27 252 259 0 0 chr17 40455982 40456040 -44982440 + L2 LINE L2 3256 3313 0 182 333 87 14 chr17 40456029 40456167 -44982313 - L2 LINE L2 -1002 2312 2165 * 221 154 0 0 chr17 40456189 40456228 -44982252 - L2 LINE L2 -6 3307 3269 180 238 36 83 chr17 40456404 40456488 -44981992 - L2 LINE L2 -335 2978 2899 24 53 0 0 chr17 40458259 40458297 -44980183 + GC_rich Low_complexity Low_complexity 1 38 0 195 100 0 0 chr17 40458307 40458337 -44980143 + (CGG)n Simple_repeat Simple_repeat 1 30 0 24 53 0 0 chr17 40458649 40458687 -44979793 + GC_rich Low_complexity Low_complexity 1 38 0 200 358 0 0 chr17 40459373 40459440 -44979040 - MIR3 SINE MIR -28 180 114 329 325 73 0 chr17 40460304 40460427 -44978053 + MIR3 SINE MIR 54 185 -23 585 184 10 0 chr17 40460430 40460528 -44977952 - FLAM_A SINE Alu -18 124 26 207 0 0 0 chr17 40460592 40460615 -44977865 + (A)n Simple_repeat Simple_repeat 1 23 0 2269 105 0 6 chr17 40460731 40461044 -44977436 - AluSx SINE Alu -1 311 1 2209 85 3 0 chr17 40461051 40461366 -44977114 - AluSp SINE Alu 0 316 1 407 292 118 45 chr17 40461639 40461817 -44976663 - MIR SINE MIR -54 208 18 2445 50 3 3 chr17 40462744 40463043 -44975437 + AluY SINE Alu 1 299 -12 24 0 0 0 chr17 40463879 40463903 -44974577 + AT_rich Low_complexity Low_complexity 1 24 0 2020 99 46 3 chr17 40463907 40464189 -44974291 + AluSx SINE Alu 1 294 -18 2238 91 0 0 chr17 40467871 40468168 -44970312 + AluSg SINE Alu 1 297 -13 216 0 0 0 chr17 40468176 40468200 -44970280 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 593 27 0 0 chr17 40470236 40470310 -44968170 + AluY SINE Alu 229 302 -8 2185 112 0 0 chr17 40470626 40470929 -44967551 + AluSx SINE Alu 2 304 -8 207 0 0 0 chr17 40472550 40472573 -44965907 + (A)n Simple_repeat Simple_repeat 1 23 0 1778 128 83 0 chr17 40473343 40473632 -44964848 + AluSp SINE Alu 1 313 0 1903 164 6 6 chr17 40473675 40473986 -44964494 - AluJo SINE Alu -1 311 1 252 0 0 0 chr17 40474680 40474708 -44963772 + (TG)n Simple_repeat Simple_repeat 2 29 0 233 286 43 14 chr17 40475127 40475197 -44963283 + L3 LINE CR1 1420 1491 -86 197 240 0 20 chr17 40475204 40475254 -44963226 - L2 LINE L2 0 3313 3265 318 0 23 0 chr17 40475285 40475329 -44963151 + AluY SINE Alu 2 46 -254 1353 126 0 0 chr17 40475429 40475620 -44962860 - AluSg SINE Alu -119 191 1 1761 143 35 11 chr17 40475621 40475908 -44962572 - AluSx SINE Alu -18 294 1 1864 172 0 0 chr17 40475908 40476209 -44962271 - AluJo SINE Alu -10 302 1 2259 107 0 0 chr17 40477680 40477988 -44960492 + AluSx SINE Alu 1 308 -4 1749 160 20 10 chr17 40477999 40478292 -44960188 + AluJb SINE Alu 1 296 -16 1969 114 16 16 chr17 40478341 40478648 -44959832 - AluSx SINE Alu -5 307 1 2051 101 11 0 chr17 40478654 40478960 -44959520 - AluY SINE Alu 0 309 1 2197 97 0 16 chr17 40478960 40479270 -44959210 - AluSc SINE Alu -3 306 1 317 259 163 0 chr17 40479314 40479449 -44959031 - MIR SINE MIR -8 254 98 244 254 0 0 chr17 40480762 40480821 -44957659 + MIR SINE MIR 81 139 -123 1186 113 6 0 chr17 40480831 40480999 -44957481 + AluSg/x SINE Alu 135 303 -9 2011 132 0 26 chr17 40481003 40481314 -44957166 + AluJb SINE Alu 5 307 -5 211 294 91 70 chr17 40481777 40481920 -44956560 + L2 LINE L2 2914 3059 -213 187 228 70 35 chr17 40482111 40482168 -44956312 + L3 LINE CR1 85 143 -1434 192 389 61 0 chr17 40482190 40482321 -44956159 + L2 LINE L2 2183 2321 -993 1003 328 70 32 chr17 40482327 40482867 -44955613 + L2 LINE L2 2427 2995 -277 406 243 77 42 chr17 40483208 40483263 -44955217 + L1M4 LINE L1 3730 3782 -2364 750 211 0 0 chr17 40483263 40483391 -44955089 + FLAM_A SINE Alu 2 129 -4 406 243 77 42 chr17 40483391 40483546 -44954934 + L1M4 LINE L1 3782 3950 -2196 2322 85 0 3 chr17 40485245 40485550 -44952930 - AluSx SINE Alu -8 304 1 494 292 146 16 chr17 40485992 40486177 -44952303 + MIR SINE MIR 41 249 -13 304 247 0 39 chr17 40486265 40486342 -44952138 - MIR SINE MIR -65 197 124 2352 106 0 0 chr17 40486346 40486657 -44951823 + AluSx SINE Alu 1 311 -1 2278 160 56 0 chr17 40486657 40487119 -44951361 + L1MB7 LINE L1 5433 5920 -264 21 0 0 0 chr17 40489642 40489663 -44948817 + GC_rich Low_complexity Low_complexity 1 21 0 322 263 0 0 chr17 40490795 40490869 -44947611 + MIR SINE MIR 79 146 -62 265 311 116 23 chr17 40491415 40491566 -44946914 - MIR3 SINE MIR -28 180 16 506 301 51 0 chr17 40493072 40493228 -44945252 - MIR SINE MIR -50 212 49 693 163 0 49 chr17 40493228 40493351 -44945129 + FLAM_C SINE Alu 1 117 -26 355 261 43 11 chr17 40493353 40493445 -44945035 + L1MCa LINE L1 1970 2064 -4362 * 380 339 12 25 chr17 40493355 40493526 -44944954 - L1MC4 LINE L1 -1124 6702 6489 200 279 23 23 chr17 40494355 40494441 -44944039 + C-rich Low_complexity Low_complexity 3 88 0 406 237 54 0 chr17 40494995 40495088 -44943392 - MER91C DNA MER1_type -8 132 35 454 256 160 0 chr17 40495709 40495834 -44942646 + MIR3 SINE MIR 43 187 -21 267 316 63 25 chr17 40497809 40497957 -44940523 - MIR SINE MIR -67 141 3 240 318 0 45 chr17 40502215 40502303 -44936177 - L2 LINE L2 -1 3312 3229 300 216 78 60 chr17 40502342 40502380 -44936100 + L1MC4 LINE L1 6586 6622 -1420 2140 77 18 3 chr17 40502380 40502666 -44935814 + AluY SINE Alu 1 290 -21 300 216 78 60 chr17 40502666 40502743 -44935737 + L1MC4 LINE L1 6622 6703 -1339 30 27 0 0 chr17 40502743 40502780 -44935700 + AT_rich Low_complexity Low_complexity 1 37 0 1575 175 3 42 chr17 40502829 40503138 -44935342 - AluJo SINE Alu -15 297 1 2011 148 0 3 chr17 40503254 40503552 -44934928 - AluSx SINE Alu -14 298 2 2075 96 31 0 chr17 40503553 40503844 -44934636 - AluSx SINE Alu -12 300 1 2006 138 3 3 chr17 40505922 40506234 -44932246 + AluSx SINE Alu 1 312 0 1005 154 26 0 chr17 40508076 40508232 -44930248 - AluJb SINE Alu -21 291 132 2182 114 3 3 chr17 40508314 40508621 -44929859 + AluSq SINE Alu 1 307 -6 877 142 0 8 chr17 40508828 40508962 -44929518 - AluJb SINE Alu -179 133 1 1034 51 76 0 chr17 40509024 40509181 -44929299 + L1PA13 LINE L1 5868 6036 -127 239 163 0 0 chr17 40509181 40509224 -44929256 + Alu SINE Alu 60 102 -200 2246 131 0 0 chr17 40510547 40510859 -44927621 - AluSx SINE Alu 0 312 1 2338 78 3 7 chr17 40510862 40511168 -44927312 - AluY SINE Alu -6 305 1 2134 104 3 17 chr17 40511168 40511467 -44927013 - AluSx SINE Alu -17 295 1 1726 161 43 0 chr17 40511487 40511767 -44926713 + AluJb SINE Alu 1 292 -20 2267 70 0 13 chr17 40511769 40512096 -44926384 + AluY SINE Alu 1 311 0 1026 173 103 0 chr17 40512951 40513165 -44925315 + Tigger7 DNA MER2_type 32 267 -466 633 124 0 0 chr17 40513163 40513260 -44925220 + Tigger7 DNA MER2_type 2395 2491 0 * 930 131 57 6 chr17 40513317 40513492 -44924988 - MER20 DNA MER1_type 0 219 36 602 100 0 0 chr17 40513791 40513871 -44924609 + AluS SINE Alu 1 80 -233 657 246 163 9 chr17 40514078 40514293 -44924187 - MIR SINE MIR 0 262 15 2334 53 0 20 chr17 40514326 40514463 -44924017 + AluSq SINE Alu 1 139 -174 2248 36 72 0 chr17 40514463 40514740 -44923740 + AluY SINE Alu 1 297 -14 2334 53 0 20 chr17 40514740 40514905 -44923575 + AluSq SINE Alu 139 297 -16 200 233 0 83 chr17 40515954 40516014 -44922466 - MIR SINE MIR -114 94 40 836 261 51 17 chr17 40516530 40516764 -44921716 - MIR SINE MIR -16 246 5 1996 128 14 0 chr17 40516905 40517201 -44921279 - AluSg SINE Alu -10 300 1 486 256 119 0 chr17 40517418 40517608 -44920872 - MIR SINE MIR -24 238 22 4486 129 44 8 chr17 40519583 40520309 -44918171 - L1MB7 LINE L1 0 6184 5433 1863 104 32 75 chr17 40520310 40520483 -44917997 - AluSx SINE Alu -17 295 139 2099 100 0 42 chr17 40520483 40520792 -44917688 - AluSx SINE Alu -16 296 1 1863 104 32 75 chr17 40520792 40520926 -44917554 - AluSx SINE Alu -173 139 1 208 188 0 21 chr17 40520984 40521032 -44917448 + (TA)n Simple_repeat Simple_repeat 1 47 0 200 188 12 62 chr17 40531818 40531898 -44906582 + (TCTG)n Simple_repeat Simple_repeat 4 79 0 205 176 0 0 chr17 40532836 40532870 -44905610 + (TG)n Simple_repeat Simple_repeat 1 34 0 241 180 0 33 chr17 40533608 40533669 -44904811 + C-rich Low_complexity Low_complexity 2 60 0 180 0 0 0 chr17 40533780 40533800 -44904680 + (TCTCCC)n Simple_repeat Simple_repeat 6 25 0 203 256 0 37 chr17 40533862 40533944 -44904536 + C-rich Low_complexity Low_complexity 3 81 0 211 278 0 0 chr17 40535372 40535426 -44903054 + (TCCA)n Simple_repeat Simple_repeat 1 54 0 819 150 0 36 chr17 40535446 40535586 -44902894 + AluJo SINE Alu 1 135 -177 1910 76 4 27 chr17 40536096 40536358 -44902122 - AluSq SINE Alu -6 307 52 210 191 0 24 chr17 40536502 40536544 -44901936 - L2 LINE L2 -3 3269 3229 1197 174 40 0 chr17 40536642 40536843 -44901637 - MER3 DNA MER1_type 0 209 1 440 324 160 0 chr17 40537356 40537569 -44900911 + MIR SINE MIR 16 262 0 262 300 54 31 chr17 40538261 40538391 -44900089 + MIR SINE MIR 52 184 -78 192 310 43 52 chr17 40538372 40538488 -44899992 - MIR SINE MIR -146 116 2 * 25 75 0 0 chr17 40539447 40539500 -44898980 + AT_rich Low_complexity Low_complexity 1 53 0 189 195 0 0 chr17 40540025 40540066 -44898414 + (CA)n Simple_repeat Simple_repeat 1 41 0 2340 96 0 6 chr17 40540794 40541108 -44897372 + AluSx SINE Alu 1 312 0 313 326 16 23 chr17 40541120 40541249 -44897231 + L1M4 LINE L1 3073 3200 -2946 336 248 91 0 chr17 40541451 40541572 -44896908 - MER20B DNA MER1_type -44 739 608 1328 205 29 103 chr17 40542169 40542329 -44896151 + MLT1B LTR MaLR 1 171 -219 631 133 125 25 chr17 40542329 40542449 -44896031 - FLAM_C SINE Alu 0 133 2 1328 205 29 103 chr17 40542449 40542707 -44895773 + MLT1B LTR MaLR 171 388 -2 2633 167 38 13 chr17 40542992 40543466 -44895014 - MER66B LTR ERV1 0 486 1 371 222 71 40 chr17 40543783 40543909 -44894571 + MIR SINE MIR 46 175 -87 226 326 22 0 chr17 40543949 40544038 -44894442 + L2 LINE L2 2969 3059 -213 1410 140 9 0 chr17 40544454 40544682 -44893798 - AluSg/x SINE Alu -7 303 74 217 264 25 50 chr17 40544851 40544972 -44893508 + GA-rich Low_complexity Low_complexity 1 118 0 2040 138 0 10 chr17 40545659 40545971 -44892509 - AluJo SINE Alu -3 309 1 197 33 33 0 chr17 40546821 40546851 -44891629 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 540 0 0 0 chr17 40546964 40547024 -44891456 + (TG)n Simple_repeat Simple_repeat 2 61 0 2036 117 13 0 chr17 40547177 40547476 -44891004 + AluSx SINE Alu 1 303 -9 186 291 12 70 chr17 40547944 40548030 -44890450 - MIR3 SINE MIR -43 165 85 204 194 0 0 chr17 40548581 40548617 -44889863 + L2 LINE L2 3184 3219 -94 198 0 0 0 chr17 40549734 40549756 -44888724 + (TTCC)n Simple_repeat Simple_repeat 3 24 0 2297 70 3 0 chr17 40549756 40550041 -44888439 - AluSx SINE Alu -26 286 1 180 317 25 50 chr17 40550094 40550214 -44888266 - MIR3 SINE MIR -85 123 7 225 94 0 0 chr17 40551198 40551230 -44887250 + (CGTG)n Simple_repeat Simple_repeat 4 35 0 2186 103 0 28 chr17 40551940 40552260 -44886220 - AluSx SINE Alu -1 311 1 300 247 0 39 chr17 40552264 40552341 -44886139 + MIR SINE MIR 124 197 -65 474 251 127 6 chr17 40552429 40552593 -44885887 - MIR SINE MIR -13 249 61 1999 104 38 3 chr17 40553056 40553180 -44885300 + AluSx SINE Alu 1 119 -193 339 44 0 0 chr17 40553180 40553225 -44885255 + (CA)n Simple_repeat Simple_repeat 2 46 0 1999 104 38 3 chr17 40553225 40553389 -44885091 + AluSx SINE Alu 119 299 -13 1498 163 29 0 chr17 40553548 40553794 -44884686 - AluJb SINE Alu -16 296 44 1734 149 30 10 chr17 40553799 40554094 -44884386 - AluJb SINE Alu -10 302 2 180 330 106 21 chr17 40554360 40554454 -44884026 + MIR SINE MIR 49 150 -58 273 306 201 0 chr17 40554483 40554617 -44883863 + L2 LINE L2 3100 3260 -12 198 264 0 0 chr17 40554971 40555024 -44883456 - MIR SINE MIR -106 102 50 181 359 0 0 chr17 40556143 40556207 -44882273 + L3b LINE CR1 1520 1583 0 349 277 181 71 chr17 40557222 40557558 -44880922 + L2 LINE L2 2897 3269 -3 342 234 43 11 chr17 40559606 40559700 -44878780 - MIR3 SINE MIR -6 202 106 523 324 36 14 chr17 40559782 40560001 -44878479 + MIR SINE MIR 27 250 -12 2112 89 45 0 chr17 40560120 40560412 -44878068 + AluSq SINE Alu 1 305 -8 380 258 197 38 chr17 40560439 40560571 -44877909 + MER5B DNA MER1_type 1 153 -25 180 339 0 17 chr17 40560628 40560687 -44877793 + MER5A DNA MER1_type 128 185 -4 544 274 43 6 chr17 40561312 40561476 -44877004 + MIR SINE MIR 20 189 -73 275 239 120 43 chr17 40561735 40561827 -44876653 - MIR SINE MIR -56 206 108 641 241 15 34 chr17 40561880 40562067 -44876413 - MIR SINE MIR -14 248 64 410 240 32 24 chr17 40562791 40562916 -44875564 + MIR SINE MIR 20 145 -117 1339 156 5 0 chr17 40562968 40563179 -44875301 - AluSg/x SINE Alu -17 293 82 1495 110 46 156 chr17 40563220 40563349 -44875131 + AluJo SINE Alu 1 143 -159 1472 103 0 45 chr17 40563349 40563573 -44874907 + AluSq SINE Alu 1 214 -99 1495 110 46 156 chr17 40563573 40563769 -44874711 + AluJo SINE Alu 143 290 -12 284 286 71 39 chr17 40564032 40564186 -44874294 + L3 LINE CR1 1316 1474 -103 458 304 19 6 chr17 40564777 40564938 -44873542 - MIR SINE MIR 0 262 100 325 279 63 38 chr17 40564989 40565044 -44873436 + MIR SINE MIR 100 152 -110 2227 106 7 0 chr17 40565044 40565346 -44873134 + AluSx SINE Alu 1 304 -8 325 279 63 38 chr17 40565346 40565448 -44873032 + MIR SINE MIR 152 261 -1 2140 189 13 53 chr17 40565620 40566074 -44872406 - MER63B DNA MER1_type 0 436 1 275 268 27 27 chr17 40566257 40566369 -44872111 - MIR SINE MIR -7 255 144 805 193 250 0 chr17 40567206 40567398 -44871082 + MIR SINE MIR 18 257 -5 187 263 0 0 chr17 40567409 40567447 -44871033 - L2 LINE L2 -9 3304 3267 685 248 83 26 chr17 40567462 40567692 -44870788 - MIR SINE MIR 0 262 20 2007 134 3 6 chr17 40567916 40568229 -44870251 + AluSx SINE Alu 1 312 0 386 303 26 0 chr17 40568311 40568463 -44870017 - L2 LINE L2 -455 2859 2704 240 348 152 22 chr17 40568797 40568975 -44869505 + MIR SINE MIR 7 207 -55 518 214 82 124 chr17 40569036 40569152 -44869328 - MIR SINE MIR 0 262 143 1749 148 31 3 chr17 40569152 40569443 -44869037 - AluJb SINE Alu -13 299 1 518 214 82 124 chr17 40569443 40569593 -44868887 - MIR SINE MIR -119 143 7 2024 178 68 32 chr17 40569610 40570053 -44868427 + LTR2B LTR ERV1 32 490 0 180 340 50 10 chr17 40570072 40570172 -44868308 - MIR SINE MIR -70 138 35 235 244 0 73 chr17 40570530 40570612 -44867868 + MIR SINE MIR 82 157 -105 379 273 174 12 chr17 40570619 40570780 -44867700 - MIR SINE MIR -68 194 8 261 283 117 25 chr17 40571500 40571620 -44866860 + MIR SINE MIR 18 148 -60 2144 91 0 3 chr17 40571772 40572059 -44866421 + AluSx SINE Alu 14 299 -13 1612 211 74 26 chr17 40573782 40573909 -44864571 - L1M4 LINE L1 -2228 3918 3799 750 211 0 0 chr17 40573909 40574037 -44864443 - FLAM_A SINE Alu -4 129 2 1612 211 74 26 chr17 40574037 40574368 -44864112 - L1M4 LINE L1 -2347 3799 3438 2381 70 3 0 chr17 40574542 40574844 -44863636 + AluY SINE Alu 1 303 -8 274 324 70 28 chr17 40574887 40574914 -44863566 - L2 LINE L2 0 3272 3248 2034 100 0 28 chr17 40574914 40575237 -44863243 + AluSx SINE Alu 1 315 0 274 324 70 28 chr17 40575237 40575348 -44863132 - L2 LINE L2 -24 3248 3125 927 190 12 71 chr17 40575423 40575558 -44862922 + MER33 DNA MER1_type 26 141 -2444 849 156 0 0 chr17 40575558 40575686 -44862794 - FLAM_C SINE Alu -2 131 4 927 190 12 71 chr17 40575686 40575803 -44862677 + MER33 DNA MER1_type 141 263 -61 741 265 131 8 chr17 40575806 40576066 -44862414 - MLT1C LTR MaLR -2 465 174 1704 179 0 7 chr17 40576073 40576375 -44862105 - AluJo SINE Alu -12 300 1 1878 126 13 23 chr17 40576518 40576820 -44861660 - AluSx SINE Alu -13 299 1 253 284 110 0 chr17 40576886 40577013 -44861467 + LTR67 LTR ERVL 395 535 -22 180 412 9 9 chr17 40577450 40577564 -44860916 + MIR SINE MIR 8 121 -141 1643 145 25 18 chr17 40577745 40578062 -44860418 + AluJb SINE Alu 1 319 0 276 200 43 86 chr17 40578224 40578310 -44860170 - Charlie7 DNA MER1_type -10 2602 2523 2103 130 0 10 chr17 40578310 40578609 -44859871 + AluSx SINE Alu 1 296 -16 276 200 43 86 chr17 40578609 40578662 -44859818 - Charlie7 DNA MER1_type -89 2523 2469 * 2314 216 55 46 chr17 40578660 40579529 -44858951 - Charlie7 DNA MER1_type -65 2547 1671 570 253 132 105 chr17 40579564 40579869 -44858611 - Charlie7 DNA MER1_type -2174 438 120 2532 55 0 0 chr17 40579869 40580176 -44858304 - AluY SINE Alu 0 311 5 570 253 132 105 chr17 40580176 40580242 -44858238 - Charlie7 DNA MER1_type -2492 120 57 444 161 0 0 chr17 40581181 40581262 -44857218 + MLT1E3 LTR MaLR 544 624 0 * 1052 186 20 67 chr17 40581262 40581512 -44856968 - MER115 DNA AcHobo -57 636 399 343 326 47 8 chr17 40581615 40581744 -44856736 - MER115 DNA AcHobo -466 227 94 1405 286 57 35 chr17 40581897 40582767 -44855713 - HAL1 LINE L1 -803 1704 776 432 379 30 50 chr17 40582936 40583377 -44855103 - HAL1 LINE L1 -2075 432 1 401 288 0 18 chr17 40583751 40583862 -44854618 + MIR SINE MIR 154 262 0 224 369 56 49 chr17 40583922 40584209 -44854271 + L2 LINE L2 2968 3256 -16 2144 121 0 6 chr17 40584298 40584611 -44853869 + AluSx SINE Alu 1 311 -1 527 144 10 0 chr17 40584616 40584713 -44853767 + GA-rich Low_complexity Low_complexity 4 101 0 183 368 0 26 chr17 40585256 40585332 -44853148 - L2 LINE L2 -54 3218 3145 2112 89 45 0 chr17 40585610 40585902 -44852578 + AluSq SINE Alu 1 305 -8 273 306 201 0 chr17 40586193 40586327 -44852153 - L2 LINE L2 -12 3260 3100 180 330 106 21 chr17 40586356 40586450 -44852030 - MIR SINE MIR -58 150 49 1692 155 30 10 chr17 40586716 40587012 -44851468 + AluJb SINE Alu 2 303 -9 1034 174 119 21 chr17 40587016 40587252 -44851228 + AluJo SINE Alu 44 302 -10 2321 105 0 0 chr17 40587255 40587560 -44850920 + AluSx SINE Alu 1 305 -7 264 122 0 0 chr17 40587878 40587919 -44850561 + (TG)n Simple_repeat Simple_repeat 1 41 0 209 290 37 65 chr17 40588030 40588137 -44850343 - MIR SINE MIR -73 135 32 596 232 85 14 chr17 40588481 40588692 -44849788 + L2 LINE L2 2917 3142 -171 227 270 32 0 chr17 40589572 40589635 -44848845 - MER91 DNA MER1_type 0 190 126 2257 103 0 3 chr17 40589635 40589937 -44848543 - AluSx SINE Alu -11 301 1 2508 61 0 0 chr17 40589938 40590249 -44848231 - AluY SINE Alu 0 311 1 1673 188 0 7 chr17 40590249 40590553 -44847927 - AluJo SINE Alu -10 302 1 1872 125 13 26 chr17 40590696 40590999 -44847481 - AluSx SINE Alu -13 299 1 253 284 110 0 chr17 40591065 40591192 -44847288 + LTR67 LTR ERVL 395 535 -22 402 301 83 0 chr17 40592027 40592160 -44846320 - MIR3 SINE MIR -3 205 62 880 253 54 0 chr17 40592698 40592919 -44845561 + MIR SINE MIR 2 234 -28 1702 142 0 3 chr17 40592938 40593234 -44845246 - AluSp SINE Alu -16 297 3 586 235 15 0 chr17 40593254 40593386 -44845094 - FRAM SINE Alu -11 165 32 191 685 0 0 chr17 40593527 40593616 -44844864 + G-rich Low_complexity Low_complexity 1 89 0 302 223 85 43 chr17 40594766 40594860 -44843620 - L2 LINE L2 -43 3229 3132 205 319 0 44 chr17 40595368 40595459 -44843021 + CT-rich Low_complexity Low_complexity 6 92 0 455 210 86 43 chr17 40595577 40595739 -44842741 - MIR SINE MIR -70 192 24 309 181 97 0 chr17 40597001 40597073 -44841407 + LTR50 LTR ERVL 717 795 0 1032 241 38 19 chr17 40597224 40597486 -44840994 - MLT1E LTR MaLR 0 593 327 307 245 32 11 chr17 40597743 40597837 -44840643 + MLT1E3 LTR MaLR 384 479 -114 570 209 0 0 chr17 40598530 40598669 -44839811 + (CA)n Simple_repeat Simple_repeat 1 139 0 349 161 0 0 chr17 40598971 40599033 -44839447 - AluSp SINE Alu -106 197 136 1988 125 13 33 chr17 40599176 40599481 -44838999 - AluSx SINE Alu -13 299 1 246 273 50 0 chr17 40599575 40599674 -44838806 + LTR67 LTR ERVL 432 535 -22 1765 145 25 18 chr17 40600406 40600720 -44837760 + AluJb SINE Alu 1 316 0 2323 185 44 118 chr17 40600882 40600968 -44837512 - Charlie7 DNA MER1_type -10 2602 2511 2241 130 0 10 chr17 40600968 40601267 -44837213 + AluSx SINE Alu 1 296 -16 2323 185 44 118 chr17 40601267 40602187 -44836293 - Charlie7 DNA MER1_type -101 2511 1671 578 290 158 37 chr17 40602222 40602519 -44835961 - Charlie7 DNA MER1_type -2174 438 106 2724 48 0 0 chr17 40602527 40602837 -44835643 - AluY SINE Alu -1 310 1 674 88 20 0 chr17 40602838 40602940 -44835540 + (TTCC)n Simple_repeat Simple_repeat 2 105 0 2097 119 7 7 chr17 40602948 40603250 -44835230 - AluSx SINE Alu -10 302 1 805 112 32 8 chr17 40603279 40603404 -44835076 - FLAM_C SINE Alu -1 132 5 453 161 0 0 chr17 40604409 40604490 -44833990 + MLT1E3 LTR MaLR 544 624 0 * 1044 186 20 67 chr17 40604490 40604740 -44833740 - MER115 DNA AcHobo -57 636 399 327 326 47 8 chr17 40604843 40604972 -44833508 - MER115 DNA AcHobo -466 227 94 1855 178 57 0 chr17 40605037 40605407 -44833073 - L1MB5 LINE L1 -8 6166 5776 2532 47 0 10 chr17 40606572 40606868 -44831612 - AluY SINE Alu -18 293 1 256 336 82 15 chr17 40606868 40606993 -44831487 - MIR SINE MIR -42 220 84 318 240 125 0 chr17 40607152 40607248 -44831232 - MIR3 SINE MIR -8 200 93 366 181 85 43 chr17 40607843 40607937 -44830543 - L2 LINE L2 -43 3229 3132 1102 151 0 0 chr17 40608131 40608290 -44830190 + FRAM SINE Alu 4 162 -14 201 388 122 0 chr17 40608418 40608565 -44829915 - L2 LINE L2 -557 2757 2593 330 312 28 57 chr17 40608587 40608869 -44829611 - L2 LINE L2 -823 2491 2218 1009 269 106 29 chr17 40608926 40609369 -44829111 + LTR16C LTR ERVL 15 491 0 2468 72 0 13 chr17 40609958 40610262 -44828218 - AluSq SINE Alu -13 300 1 611 228 156 11 chr17 40610292 40610472 -44828008 + MER112 DNA MER1_type 4 209 -51 444 234 18 18 chr17 40610518 40610629 -44827851 + L2 LINE L2 3197 3307 -6 309 305 93 50 chr17 40611217 40611549 -44826931 - L2 LINE L2 -212 3060 2703 646 144 8 24 chr17 40611564 40611578 -44826902 - AluJo/FRAM SINE Alu 0 312 299 2221 108 3 3 chr17 40611578 40611884 -44826596 - AluY SINE Alu -5 306 1 646 144 8 24 chr17 40611884 40611994 -44826486 - AluJo/FRAM SINE Alu -13 299 190 226 122 20 41 chr17 40612122 40612171 -44826309 + (CAGTA)n Simple_repeat Simple_repeat 2 49 0 2469 93 0 0 chr17 40613971 40614283 -44824197 + AluSx SINE Alu 1 312 0 486 272 68 14 chr17 40615756 40615903 -44822577 + MIR SINE MIR 49 203 -59 450 0 0 0 chr17 40616012 40616062 -44822418 + (TG)n Simple_repeat Simple_repeat 1 50 0 537 103 0 35 chr17 40616367 40616454 -44822026 - AluJ/FRAM SINE Alu -11 301 218 832 156 0 0 chr17 40616456 40616584 -44821896 - AluJo/FLAM SINE Alu -174 128 1 189 338 26 13 chr17 40616712 40616789 -44821691 + L2 LINE L2 3099 3176 -96 406 115 0 0 chr17 40617012 40617073 -44821407 - AluS SINE Alu -256 62 2 208 304 0 0 chr17 40617162 40617218 -44821262 - L2 LINE L2 -16 3297 3242 230 333 41 32 chr17 40617326 40617449 -44821031 - L2 LINE L2 -181 3091 2968 454 270 0 18 chr17 40617509 40617620 -44820860 - MIR SINE MIR 0 262 154 387 379 30 50 chr17 40617994 40618435 -44820045 + HAL1 LINE L1 1 432 -2075 1555 272 60 38 chr17 40618604 40619542 -44818938 + HAL1 LINE L1 776 1755 -752 233 301 88 9 chr17 40619611 40619724 -44818756 - L1M4 LINE L1 -2472 3674 3553 758 277 99 52 chr17 40619824 40620289 -44818191 + MLT1J LTR MaLR 25 511 0 24 0 0 0 chr17 40621050 40621074 -44817406 + AT_rich Low_complexity Low_complexity 1 24 0 466 264 117 25 chr17 40621087 40621250 -44817230 + MIR3 SINE MIR 23 200 -8 322 301 82 20 chr17 40621243 40621389 -44817091 - L2 LINE L2 -1 3312 3158 * 260 323 0 0 chr17 40621778 40621843 -44816637 + L2 LINE L2 3149 3213 -59 1596 191 19 117 chr17 40622052 40622106 -44816374 + MLT1C LTR MaLR 1 59 -408 1963 130 60 3 chr17 40622106 40622390 -44816090 + AluSx SINE Alu 1 300 -12 1596 191 19 117 chr17 40622390 40622541 -44815939 + MLT1C LTR MaLR 59 223 -244 2651 67 20 0 chr17 40622541 40622899 -44815581 + L1PA8 LINE L1 5805 6169 -3 1596 191 19 117 chr17 40622899 40623206 -44815274 + MLT1C LTR MaLR 223 464 -3 2115 145 0 3 chr17 40623306 40623603 -44814877 - AluSx SINE Alu -16 296 1 2066 143 0 7 chr17 40623608 40623901 -44814579 - AluJb SINE Alu -21 291 1 487 182 10 0 chr17 40624020 40624119 -44814361 - MER53 DNA DNA -89 100 1 365 304 45 34 chr17 40624695 40624994 -44813486 - L2 LINE L2 -194 3078 2780 1752 253 70 23 chr17 40625356 40625874 -44812606 + MLT1E LTR MaLR 52 593 0 309 181 97 0 chr17 40626025 40626097 -44812383 - LTR50 LTR ERVL 0 795 717 431 320 73 13 chr17 40626456 40626690 -44811790 - L1ME LINE L1 -323 5798 5551 702 279 44 31 chr17 40626875 40627101 -44811379 + MIR SINE MIR 8 236 -26 423 0 0 0 chr17 40627366 40627413 -44811067 + (TG)n Simple_repeat Simple_repeat 2 48 0 450 277 45 116 chr17 40627750 40628042 -44810438 - L2 LINE L2 -3 3269 2999 219 300 73 36 chr17 40628129 40628239 -44810241 + MIR3 SINE MIR 90 203 -5 462 128 0 0 chr17 40628361 40628455 -44810025 + (CA)n Simple_repeat Simple_repeat 2 95 0 235 326 111 23 chr17 40628589 40628761 -44809719 + MIR SINE MIR 64 250 -12 2170 116 0 10 chr17 40628795 40629089 -44809391 + AluSx SINE Alu 7 297 -15 713 268 3 23 chr17 40629221 40629421 -44809059 + MIR SINE MIR 55 249 -13 393 287 23 16 chr17 40629432 40629561 -44808919 - MLT1J1 LTR MaLR 0 446 317 1136 119 50 0 chr17 40629593 40629752 -44808728 - AluSg/x SINE Alu -14 296 130 678 274 75 5 chr17 40629753 40629954 -44808526 - MLT1J1 LTR MaLR -168 278 64 273 362 85 42 chr17 40630990 40631187 -44807293 - L2 LINE L2 -20 3252 3036 2331 88 7 0 chr17 40631187 40631481 -44806999 + AluSq SINE Alu 1 296 -17 273 362 85 42 chr17 40631481 40631590 -44806890 - L2 LINE L2 -236 3036 2933 1999 117 45 7 chr17 40631601 40631891 -44806589 + AluSq SINE Alu 1 301 -12 257 275 133 17 chr17 40631940 40632060 -44806420 + MIR SINE MIR 36 169 -93 736 251 68 5 chr17 40632747 40632954 -44805526 + MIR SINE MIR 36 255 -7 1155 54 0 0 chr17 40632954 40633101 -44805379 + (TTCC)n Simple_repeat Simple_repeat 2 148 0 354 206 241 7 chr17 40634267 40634408 -44804072 - MER5A DNA MER1_type -7 182 9 570 209 0 0 chr17 40635062 40635201 -44803279 + (TG)n Simple_repeat Simple_repeat 1 139 0 316 254 64 9 chr17 40635878 40635988 -44802492 - MLT1E LTR MaLR -94 499 384 247 204 56 0 chr17 40636930 40636984 -44801496 - L2 LINE L2 -3 3310 3254 332 329 62 16 chr17 40637305 40637498 -44800982 - MIR SINE MIR -41 221 20 2352 106 0 0 chr17 40637794 40638096 -44800384 + AluSg SINE Alu 1 302 -8 2322 66 7 7 chr17 40638300 40638589 -44799891 + AluY SINE Alu 19 307 -4 1043 93 79 0 chr17 40638590 40638766 -44799714 + AluSg/x SINE Alu 133 319 0 2481 75 10 3 chr17 40638824 40639132 -44799348 + AluY SINE Alu 1 310 -1 279 283 82 10 chr17 40639457 40639562 -44798918 - MIR SINE MIR -63 145 61 225 315 18 18 chr17 40639701 40639812 -44798668 + CT-rich Low_complexity Low_complexity 2 112 0 220 229 33 0 chr17 40640074 40640135 -44798345 + (TG)n Simple_repeat Simple_repeat 2 64 0 4953 63 0 5 chr17 40640167 40640820 -44797660 - L1PA8 LINE L1 0 6172 5523 739 205 16 54 chr17 40640869 40641054 -44797426 - MER45A DNA AcHobo 0 178 1 277 195 34 34 chr17 40641075 40641193 -44797287 + (TG)n Simple_repeat Simple_repeat 1 118 0 438 259 7 30 chr17 40641578 40641713 -44796767 - MIR3 SINE MIR -12 196 65 249 143 0 0 chr17 40641952 40641994 -44796486 + L2 LINE L2 3258 3299 -14 618 261 140 0 chr17 40642017 40642239 -44796241 + MIR SINE MIR 1 253 -9 251 229 33 0 chr17 40642236 40642297 -44796183 + MIR SINE MIR 74 136 -126 * 202 262 0 0 chr17 40642328 40642370 -44796110 + L2 LINE L2 3215 3256 -16 414 100 0 0 chr17 40644070 40644130 -44794350 + (TG)n Simple_repeat Simple_repeat 1 60 0 434 327 40 15 chr17 40644594 40644793 -44793687 + MIR3 SINE MIR 1 204 -4 881 205 100 0 chr17 40644910 40645100 -44793380 - MIR SINE MIR -46 216 8 473 284 38 1 chr17 40645134 40645288 -44793192 - MIR SINE MIR -57 151 1 507 195 0 35 chr17 40645340 40645453 -44793027 + MIR3 SINE MIR 90 198 -10 1398 181 7 122 chr17 40646605 40647015 -44791465 + MLT1A1 LTR MaLR 3 365 0 1332 158 0 5 chr17 40649723 40649945 -44788535 - AluJb SINE Alu -7 305 85 761 185 32 13 chr17 40649951 40650108 -44788372 + MER5A DNA MER1_type 2 161 -28 280 253 175 39 chr17 40650120 40650274 -44788206 - MER5A DNA MER1_type 0 189 15 310 267 55 14 chr17 40650287 40650433 -44788047 + MIR SINE MIR 30 182 -62 183 222 93 19 chr17 40650479 40650533 -44787947 + L2 LINE L2 3141 3198 -74 229 218 0 64 chr17 40650874 40650952 -44787528 + CT-rich Low_complexity Low_complexity 1 73 0 250 203 47 0 chr17 40653558 40653622 -44784858 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 737 256 122 5 chr17 40655771 40656006 -44782474 - MIR SINE MIR -4 258 8 378 278 56 16 chr17 40656025 40656151 -44782329 - MIR SINE MIR -80 182 52 271 344 38 44 chr17 40656359 40656542 -44781938 + L2 LINE L2 2682 2863 -451 588 134 62 45 chr17 40657643 40657755 -44780725 - MER63 DNA MER1_type -272 790 677 271 309 0 0 chr17 40659542 40659610 -44778870 - L2 LINE L2 0 3313 3246 450 251 30 54 chr17 40659633 40659800 -44778680 + LTR33A LTR ERVL 23 185 -338 222 171 0 0 chr17 40659800 40659841 -44778639 + C-rich Low_complexity Low_complexity 3 43 0 4786 169 35 31 chr17 40659853 40660578 -44777902 - L1MB7 LINE L1 -7 6177 5456 2304 106 0 0 chr17 40660578 40660889 -44777591 - AluSx SINE Alu -1 311 1 4786 169 35 31 chr17 40660889 40661983 -44776497 - L1MB7 LINE L1 -728 5456 4354 * 21379 178 49 19 chr17 40661981 40668283 -44770197 + L1PA12 LINE L1 11 7306 -300 1007 204 29 44 chr17 40668277 40668552 -44769928 - L1MB7 LINE L1 -2226 3920 3650 * 2872 192 66 71 chr17 40668548 40669380 -44769100 - L1MB7 LINE L1 -2895 3251 2423 1699 167 0 30 chr17 40669380 40669680 -44768800 - AluJo SINE Alu -21 291 1 2872 192 66 71 chr17 40669680 40669772 -44768708 - L1MB7 LINE L1 -3723 2423 2332 1202 221 92 0 chr17 40669923 40670194 -44768286 + LTR33A LTR ERVL 228 523 0 307 314 73 0 chr17 40670427 40670551 -44767929 + MIR3 SINE MIR 61 193 -15 1729 172 0 3 chr17 40670887 40671184 -44767296 + AluJo SINE Alu 11 306 -6 380 239 70 35 chr17 40671194 40671336 -44767144 + MIR3 SINE MIR 38 178 -30 5451 43 5 0 chr17 40672271 40672926 -44765554 + L1PA5 LINE L1 5497 6154 0 481 250 83 0 chr17 40673424 40673532 -44764948 - L2 LINE L2 0 3272 3156 1048 189 60 84 chr17 40673546 40673895 -44764585 - MLT1B LTR MaLR 0 390 3 1981 136 0 10 chr17 40674336 40674646 -44763834 + AluJb SINE Alu 1 307 -5 335 311 74 8 chr17 40674965 40675087 -44763393 - L2 LINE L2 0 3272 3143 210 327 131 9 chr17 40675106 40675213 -44763267 - MIR SINE MIR -47 215 96 29 28 0 0 chr17 40676884 40676920 -44761560 + AT_rich Low_complexity Low_complexity 1 36 0 15445 182 31 17 chr17 40676920 40679572 -44758908 - L1PB1 LINE L1 -8 6859 4245 2072 92 41 3 chr17 40679572 40679865 -44758615 - AluY SINE Alu -7 304 1 15445 182 31 17 chr17 40679865 40683178 -44755302 - L1PB1 LINE L1 -2622 4245 663 687 238 54 5 chr17 40683186 40683371 -44755109 - L1PB1 LINE L1 -6664 199 6 202 279 262 8 chr17 40683477 40683599 -44754881 + MIR3 SINE MIR 51 203 -5 430 281 31 68 chr17 40683774 40684058 -44754422 + L2 LINE L2 2781 3053 -219 185 293 0 35 chr17 40684185 40684243 -44754237 + L2 LINE L2 3216 3271 -1 1285 174 0 9 chr17 40684314 40684532 -44753948 + MER57A-int LTR ERV1 253 468 -7069 577 253 129 16 chr17 40684701 40684887 -44753593 - MIR SINE MIR -6 256 50 2353 152 25 8 chr17 40684961 40685340 -44753140 + MER57A LTR ERV1 1 389 -14 2235 100 3 0 chr17 40685340 40685650 -44752830 - AluSq SINE Alu -2 311 1 2353 152 25 8 chr17 40685650 40685666 -44752814 + MER57A LTR ERV1 389 403 0 2263 92 0 13 chr17 40685690 40685993 -44752487 + AluSq SINE Alu 1 299 -14 6794 136 27 48 chr17 40685996 40687199 -44751281 + MER57A-int LTR ERV1 4543 5717 -1820 1944 122 10 0 chr17 40687199 40687493 -44750987 + AluSx SINE Alu 1 297 -15 6794 136 27 48 chr17 40687493 40687596 -44750884 + MER57A-int LTR ERV1 5717 5821 -1716 7519 192 26 15 chr17 40687722 40688294 -44750186 + MER57A-int LTR ERV1 2419 2983 -4554 2673 104 35 24 chr17 40688294 40688717 -44749763 + MSTA LTR MaLR 1 428 0 7519 192 26 15 chr17 40688717 40689656 -44748824 + MER57A-int LTR ERV1 2983 7146 -391 645 138 58 51 chr17 40689656 40689794 -44748686 + LTR54B LTR ERV1 3 141 -357 1379 160 13 9 chr17 40689794 40690025 -44748455 + MER57A-int LTR ERV1 7306 7537 0 2166 160 69 0 chr17 40690025 40690400 -44748080 + MER57A LTR ERV1 1 401 -2 578 272 17 28 chr17 40690650 40690830 -44747650 - LTR67 LTR ERVL -377 180 3 728 214 31 45 chr17 40690955 40691179 -44747301 - L1ME1 LINE L1 -5 6161 5941 781 291 22 0 chr17 40691555 40691778 -44746702 + MER115 DNA AcHobo 143 370 -323 798 214 57 10 chr17 40691812 40692004 -44746476 + MER115 DNA AcHobo 491 691 -2 349 321 136 23 chr17 40692118 40692339 -44746141 - MIR SINE MIR -11 251 6 372 373 26 1 chr17 40692632 40692810 -44745670 + MIR SINE MIR 11 191 -67 205 197 13 105 chr17 40693613 40693689 -44744791 - MIR SINE MIR -87 121 53 225 0 0 0 chr17 40693847 40693872 -44744608 + (CA)n Simple_repeat Simple_repeat 2 26 0 1336 160 0 0 chr17 40693889 40694095 -44744385 - AluJb SINE Alu -23 289 84 320 342 19 7 chr17 40694214 40694369 -44744111 + L3b LINE CR1 1254 1410 -173 310 311 118 0 chr17 40694622 40694741 -44743739 + L2 LINE L2 3172 3304 -9 798 268 117 35 chr17 40694830 40695391 -44743089 + L1ME4a LINE L1 5508 6118 -3 553 274 42 6 chr17 40695516 40695684 -44742796 + MER5B DNA MER1_type 1 174 -4 470 126 147 11 chr17 40695696 40695791 -44742689 - MER3 DNA MER1_type -1 208 101 1266 126 0 0 chr17 40695791 40695965 -44742515 - AluSg/x SINE Alu 0 312 139 363 159 16 32 chr17 40695970 40696033 -44742447 - MER3 DNA MER1_type -99 110 49 1725 181 0 10 chr17 40696065 40696357 -44742123 + AluJb SINE Alu 1 289 -23 508 218 49 14 chr17 40697336 40697477 -44741003 + MIR3 SINE MIR 16 161 -47 448 194 234 24 chr17 40697477 40697601 -44740879 - MER5B DNA MER1_type -1 177 28 1984 103 100 0 chr17 40697601 40697882 -44740598 + AluSx SINE Alu 1 309 -3 328 179 123 0 chr17 40697948 40698033 -44740447 - MER5A DNA MER1_type -88 101 4 414 332 4 23 chr17 40698401 40698597 -44739883 - MIR SINE MIR -41 221 30 221 321 71 0 chr17 40699196 40699280 -44739200 + L2 LINE L2 3184 3273 -40 1752 173 0 0 chr17 40699950 40700227 -44738253 - AluJb SINE Alu -13 299 23 3576 117 66 2 chr17 40700228 40700740 -44737740 - MER41C LTR ERV1 -9 545 1 297 299 11 0 chr17 40701280 40701367 -44737113 - MIR SINE MIR -68 140 53 352 236 118 8 chr17 40701813 40701940 -44736540 + MIR SINE MIR 1 141 -121 255 267 0 0 chr17 40702278 40702364 -44736116 + (CA)n Simple_repeat Simple_repeat 2 87 0 1637 136 18 160 chr17 40702712 40702937 -44735543 - MLT1B LTR MaLR -4 386 255 2280 106 0 3 chr17 40702937 40703238 -44735242 - AluSx SINE Alu -12 300 1 1637 136 18 160 chr17 40703238 40703462 -44735018 - MLT1B LTR MaLR -135 255 1 1883 154 0 32 chr17 40703512 40703823 -44734657 + AluJo SINE Alu 1 301 -11 279 274 38 19 chr17 40703974 40704080 -44734400 - L1ME LINE L1 -252 5869 5762 1703 135 4 30 chr17 40704735 40705002 -44733478 - AluJb SINE Alu -52 260 1 1819 150 0 14 chr17 40705341 40705627 -44732853 + AluJo SINE Alu 1 282 -30 26 50 0 0 chr17 40706342 40706382 -44732098 + AT_rich Low_complexity Low_complexity 1 40 0 571 187 32 8 chr17 40707491 40707614 -44730866 + L2 LINE L2 3184 3309 -4 306 0 0 0 chr17 40707775 40707809 -44730671 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1830 160 7 7 chr17 40707893 40708181 -44730299 + AluJo SINE Alu 1 288 -24 25 31 0 0 chr17 40708181 40708213 -44730267 + AT_rich Low_complexity Low_complexity 1 32 0 218 147 0 0 chr17 40709004 40709038 -44729442 + L3 LINE CR1 1523 1556 -21 189 0 0 0 chr17 40712131 40712152 -44726328 + (T)n Simple_repeat Simple_repeat 1 21 0 1957 113 32 3 chr17 40712154 40712437 -44726043 + AluSx SINE Alu 2 292 -20 292 292 42 0 chr17 40713184 40713280 -44725200 + L2 LINE L2 3172 3271 -1 2307 96 0 0 chr17 40713483 40713776 -44724704 - AluSg SINE Alu -17 293 1 379 204 159 0 chr17 40713791 40713879 -44724601 - MER81 DNA DNA 0 114 13 903 242 59 35 chr17 40714331 40714756 -44723724 - MER39 LTR ERV1 0 647 67 2035 136 10 0 chr17 40715309 40715610 -44722870 + AluSx SINE Alu 1 304 -8 523 268 8 8 chr17 40715896 40716023 -44722457 + MIR SINE MIR 25 151 -111 338 264 28 57 chr17 40716173 40716279 -44722201 + MIR3 SINE MIR 58 160 -48 214 248 184 28 chr17 40716305 40716414 -44722066 - MER5A DNA MER1_type -61 128 3 233 200 17 17 chr17 40717144 40717204 -44721276 + MIR SINE MIR 203 262 0 688 120 0 0 chr17 40717456 40717548 -44720932 - FLAM_C SINE Alu -25 118 27 789 191 49 20 chr17 40717608 40717812 -44720668 - MER113 DNA MER1_type? -310 211 2 365 330 100 25 chr17 40718205 40718444 -44720036 + L3 LINE CR1 1220 1476 -101 244 169 231 0 chr17 40718938 40719003 -44719477 - MER116 DNA Mariner 0 80 1 2131 100 14 0 chr17 40719769 40720060 -44718420 + AluSg SINE Alu 1 295 -15 2125 89 11 11 chr17 40720412 40720694 -44717786 + AluSx SINE Alu 1 282 -30 473 205 12 0 chr17 40722881 40722964 -44715516 + MER3 DNA MER1_type 43 126 -83 * 975 172 166 36 chr17 40722950 40723281 -44715199 + MER3 DNA MER1_type 2248 2621 0 1084 220 29 0 chr17 40724092 40724301 -44714179 - MER58A DNA MER1_type -3 221 7 1977 142 0 0 chr17 40726845 40727126 -44711354 - AluSq SINE Alu -26 287 7 459 200 9 9 chr17 40727158 40727268 -44711212 + MER113 DNA MER1_type? 2 111 -410 1887 168 0 10 chr17 40727951 40728254 -44710226 - AluJo SINE Alu -11 301 2 204 254 74 66 chr17 40729981 40730103 -44708377 - MIR SINE MIR -59 203 81 493 275 121 0 chr17 40730412 40730594 -44707886 - L1MC5 LINE L1 -36 7925 7722 183 80 0 0 chr17 40730852 40730877 -44707603 + (A)n Simple_repeat Simple_repeat 1 25 0 394 249 139 6 chr17 40730975 40731148 -44707332 - L1ME4a LINE L1 -185 5936 5741 224 325 7 46 chr17 40732174 40732325 -44706155 + GA-rich Low_complexity Low_complexity 1 145 0 306 167 0 0 chr17 40737605 40737665 -44700815 + (TGG)n Simple_repeat Simple_repeat 2 61 0 203 184 0 0 chr17 40739510 40739548 -44698932 + A-rich Low_complexity Low_complexity 1 38 0 188 321 9 55 chr17 40740056 40740165 -44698315 + L2 LINE L2 2981 3084 -188 240 303 115 16 chr17 40740732 40740854 -44697626 + L2 LINE L2 3176 3309 -4 458 278 59 18 chr17 40740879 40741048 -44697432 - MIR SINE MIR -65 197 22 260 328 49 69 chr17 40742238 40742586 -44695894 + L2 LINE L2 2922 3262 -10 2282 50 0 18 chr17 40743031 40743314 -44695166 + AluY SINE Alu 17 294 -17 186 43 0 0 chr17 40743315 40743338 -44695142 + (TA)n Simple_repeat Simple_repeat 2 24 0 399 269 210 35 chr17 40743660 40743827 -44694653 + L2 LINE L2 3012 3148 -165 2343 91 13 0 chr17 40743827 40744134 -44694346 - AluSq SINE Alu -2 311 1 399 269 210 35 chr17 40744134 40744223 -44694257 + L2 LINE L2 3148 3313 0 1281 158 47 0 chr17 40744283 40744498 -44693982 + AluJb SINE Alu 84 308 -4 824 235 15 5 chr17 40745722 40745918 -44692562 + MER58A DNA MER1_type 24 221 -3 1843 148 3 36 chr17 40746229 40746533 -44691947 - AluJo SINE Alu -18 294 1 427 135 0 0 chr17 40746643 40746717 -44691763 - MLT1F LTR MaLR -1 541 468 1640 193 10 10 chr17 40746728 40747024 -44691456 - AluJo SINE Alu -15 297 2 265 342 54 36 chr17 40747345 40747456 -44691024 - MIR3 SINE MIR -45 163 51 259 283 94 58 chr17 40747545 40747683 -44690797 + MIR SINE MIR 120 262 0 968 135 0 0 chr17 40747969 40748110 -44690370 - FLAM_C SINE Alu -2 141 1 295 89 36 0 chr17 40748687 40748743 -44689737 + (TA)n Simple_repeat Simple_repeat 2 59 0 216 24 73 0 chr17 40748744 40748785 -44689695 + GA-rich Low_complexity Low_complexity 1 44 0 2164 110 0 17 chr17 40750587 40750888 -44687592 + AluSc SINE Alu 1 296 -13 303 248 72 16 chr17 40751470 40751595 -44686885 + L1ME2 LINE L1 5754 5885 -279 212 139 0 23 chr17 40752078 40752121 -44686359 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 1258 120 0 0 chr17 40752124 40752308 -44686172 - MIR SINE MIR -11 251 68 2116 101 0 60 chr17 40752818 40753135 -44685345 - AluSx SINE Alu -14 298 1 1371 189 22 0 chr17 40753157 40753384 -44685096 - AluJo SINE Alu -80 232 1 2105 109 3 3 chr17 40753945 40754239 -44684241 - AluSg SINE Alu -16 294 1 28 0 0 0 chr17 40754337 40754365 -44684115 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr17 40754512 40754535 -44683945 + (A)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr17 40754606 40754626 -44683854 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1694 137 49 4 chr17 40754630 40754893 -44683587 - AluSx SINE Alu -37 275 1 2047 144 7 3 chr17 40754916 40755221 -44683259 - AluSx SINE Alu -1 311 6 189 209 0 23 chr17 40755910 40755953 -44682527 + MIR3 SINE MIR 156 197 -11 46 68 0 0 chr17 40756536 40756624 -44681856 + AT_rich Low_complexity Low_complexity 1 88 0 654 249 47 80 chr17 40756873 40757233 -44681247 + MLT1H1 LTR MaLR 4 352 -203 21 0 0 0 chr17 40757739 40757760 -44680720 + AT_rich Low_complexity Low_complexity 1 21 0 2541 87 0 0 chr17 40759103 40759414 -44679066 + AluSx SINE Alu 2 312 0 300 244 24 12 chr17 40759670 40759752 -44678728 - MIR SINE MIR -70 138 56 245 313 0 12 chr17 40760446 40760526 -44677954 + MER5A DNA MER1_type 96 174 -15 994 173 72 47 chr17 40760531 40760808 -44677672 - MER33 DNA MER1_type 0 324 41 1816 124 7 28 chr17 40760808 40761098 -44677382 + AluJo SINE Alu 1 284 -28 23 0 0 0 chr17 40761109 40761132 -44677348 + AT_rich Low_complexity Low_complexity 1 23 0 855 220 13 0 chr17 40761520 40761679 -44676801 - MER5B DNA MER1_type -16 162 2 3288 138 21 24 chr17 40762084 40762292 -44676188 - MER67C LTR ERV1 -1 709 502 2083 111 35 0 chr17 40762292 40762581 -44675899 - AluSx SINE Alu -13 299 1 3288 138 21 24 chr17 40762581 40762989 -44675491 - MER67C LTR ERV1 -208 502 95 4266 187 15 23 chr17 40763007 40763897 -44674583 + L1MA9 LINE L1 4723 5618 -694 2430 96 0 0 chr17 40763897 40764209 -44674271 + AluSx SINE Alu 1 312 0 4266 187 15 23 chr17 40764209 40764379 -44674101 + L1MA9 LINE L1 5618 5788 -524 273 29 0 0 chr17 40764379 40764413 -44674067 + (TG)n Simple_repeat Simple_repeat 2 35 0 4266 187 15 23 chr17 40764413 40764915 -44673565 + L1MA9 LINE L1 5788 6274 -38 313 180 11 67 chr17 40764939 40765028 -44673452 - MER67C LTR ERV1 -612 98 15 295 275 138 0 chr17 40765425 40765534 -44672946 + L2 LINE L2 3188 3311 -2 2290 98 3 16 chr17 40767299 40767614 -44670866 - AluSx SINE Alu -1 311 1 21 36 0 0 chr17 40767650 40767678 -44670802 + AT_rich Low_complexity Low_complexity 1 28 0 810 204 23 0 chr17 40767922 40768098 -44670382 - L1MD1 LINE L1 -20 6222 6043 3351 171 30 6 chr17 40768294 40768955 -44669525 + MER67C LTR ERV1 3 679 -31 1310 103 0 0 chr17 40768955 40769130 -44669350 - AluSg/x SINE Alu -4 306 132 240 35 0 0 chr17 40769130 40769159 -44669321 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1620 41 25 0 chr17 40769159 40769355 -44669125 - AluY SINE Alu -28 283 83 183 314 0 0 chr17 40769379 40769430 -44669050 - L2 LINE L2 -220 3052 3002 1010 200 9 0 chr17 40769555 40769765 -44668715 - L1MB5 LINE L1 -6 6168 5957 1190 188 12 4 chr17 40769767 40770012 -44668468 + L1MB5 LINE L1 5701 5947 -227 25 0 0 0 chr17 40771033 40771058 -44667422 + AT_rich Low_complexity Low_complexity 1 25 0 1383 172 118 39 chr17 40771798 40772077 -44666403 + AluJo SINE Alu 1 301 -11 1060 115 6 6 chr17 40772882 40773047 -44665433 - L1PA16 LINE L1 0 6166 6002 30 0 0 0 chr17 40773579 40773609 -44664871 + AT_rich Low_complexity Low_complexity 1 30 0 2175 142 0 0 chr17 40773626 40773935 -44664545 - AluSx SINE Alu -3 309 1 721 162 0 0 chr17 40774420 40774531 -44663949 - FLAM_C SINE Alu -32 111 1 276 280 65 19 chr17 40774531 40774638 -44663842 - L1ME LINE L1 -640 5522 5411 254 321 198 0 chr17 40775571 40775652 -44662828 + L2 LINE L2 3127 3223 -49 328 253 11 0 chr17 40775672 40775767 -44662713 + L1ME3A LINE L1 5822 5917 -253 449 179 205 17 chr17 40775768 40775885 -44662595 + MIR SINE MIR 50 188 -74 476 250 86 40 chr17 40775908 40776060 -44662420 + MIR SINE MIR 28 186 -76 594 0 0 0 chr17 40776305 40776371 -44662109 + (TTTC)n Simple_repeat Simple_repeat 1 66 0 2282 93 0 0 chr17 40776372 40776651 -44661829 - AluSx SINE Alu -33 279 1 953 129 0 0 chr17 40776785 40776917 -44661563 + AluSg/x SINE Alu 155 286 -26 297 51 0 0 chr17 40776917 40776956 -44661524 + (CATA)n Simple_repeat Simple_repeat 2 40 0 238 91 0 0 chr17 40776960 40776993 -44661487 + MER112 DNA MER1_type 222 254 -6 2153 97 3 10 chr17 40777863 40778152 -44660328 + AluSx SINE Alu 11 297 -15 761 191 113 39 chr17 40778810 40779014 -44659466 + MER20 DNA MER1_type 1 219 0 418 259 65 94 chr17 40779160 40779330 -44659150 - MIR3 SINE MIR -7 201 37 2041 143 3 0 chr17 40779536 40779843 -44658637 - AluSx SINE Alu -4 308 1 2256 104 0 3 chr17 40780353 40780660 -44657820 - AluSp SINE Alu -7 306 1 21 36 0 0 chr17 40781424 40781452 -44657028 + AT_rich Low_complexity Low_complexity 1 28 0 2468 99 0 0 chr17 40781929 40782242 -44656238 - AluSq SINE Alu 0 313 1 33 73 0 0 chr17 40783244 40783312 -44655168 + AT_rich Low_complexity Low_complexity 1 68 0 3728 40 0 2 chr17 40783312 40783765 -44654715 - L1PA4 LINE L1 -5 6150 5699 25 0 0 0 chr17 40784175 40784200 -44654280 + AT_rich Low_complexity Low_complexity 1 25 0 2040 123 34 0 chr17 40784453 40784745 -44653735 - AluSx SINE Alu -10 302 1 743 301 193 35 chr17 40785479 40785914 -44652566 + L3 LINE CR1 1073 1576 -1 21 0 0 0 chr17 40786117 40786138 -44652342 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 40786359 40786388 -44652092 + AT_rich Low_complexity Low_complexity 1 29 0 808 127 0 0 chr17 40786495 40786613 -44651867 + AluJ SINE Alu 1 118 -184 391 237 86 29 chr17 40787130 40787269 -44651211 + MIR SINE MIR 105 251 -11 2150 118 0 3 chr17 40787434 40787723 -44650757 - AluJb SINE Alu -13 299 12 1232 116 0 0 chr17 40787739 40787903 -44650577 + AluJ SINE Alu 105 268 -44 2313 57 40 7 chr17 40788607 40788904 -44649576 + AluSg SINE Alu 1 307 -3 1802 145 42 7 chr17 40788993 40789282 -44649198 + AluJb SINE Alu 1 299 -13 2257 152 132 35 chr17 40791032 40791546 -44646934 + LTR6A LTR ERV1 1 564 0 1371 134 0 71 chr17 40792448 40792537 -44645943 - AluJo SINE Alu -90 222 128 2202 133 0 0 chr17 40792537 40792837 -44645643 - AluJb SINE Alu -12 300 1 1371 134 0 71 chr17 40792837 40792986 -44645494 - AluJo SINE Alu -184 128 1 2235 99 0 29 chr17 40794249 40794561 -44643919 - AluSg SINE Alu -7 303 1 975 187 0 0 chr17 40794563 40794729 -44643751 - FRAM SINE Alu -17 159 1 207 88 0 0 chr17 40795384 40795418 -44643062 + (TA)n Simple_repeat Simple_repeat 1 34 0 2140 110 0 29 chr17 40795658 40795968 -44642512 - AluSx SINE Alu -11 301 1 336 244 135 52 chr17 40797095 40797288 -44641192 + L1M2 LINE L1 401 609 -6240 1597 137 11 46 chr17 40798379 40798543 -44639937 + L1MB2 LINE L1 5896 6047 -124 2215 94 7 3 chr17 40798543 40798842 -44639638 + AluSx SINE Alu 1 300 -12 1597 137 11 46 chr17 40798842 40798961 -44639519 + L1MB2 LINE L1 6047 6169 -2 1050 106 0 0 chr17 40799570 40799712 -44638768 + AluSg/x SINE Alu 160 301 -9 4100 121 35 23 chr17 40800220 40800737 -44637743 - L1MA3 LINE L1 -1 6304 5776 2270 95 10 0 chr17 40800737 40801031 -44637449 - AluSq SINE Alu -16 297 1 4100 121 35 23 chr17 40801031 40801166 -44637314 - L1MA3 LINE L1 -529 5776 5644 207 298 19 29 chr17 40802414 40802518 -44635962 + MIR3 SINE MIR 92 194 -14 2342 90 10 0 chr17 40802590 40802900 -44635580 - AluSp SINE Alu 0 313 1 997 236 51 5 chr17 40803200 40803416 -44635064 + MER21B LTR ERV1 79 304 -559 2994 100 24 0 chr17 40803425 40803889 -44634591 + MER1A DNA MER1_type 1 528 -1 1627 234 44 48 chr17 40803889 40804180 -44634300 + MER21B LTR ERV1 307 597 -266 2906 96 43 21 chr17 40804180 40804599 -44633881 - MSTA LTR MaLR 0 428 1 1627 234 44 48 chr17 40804599 40804742 -44633738 + MER21B LTR ERV1 597 739 -124 1082 156 0 22 chr17 40804810 40804989 -44633491 + FRAM SINE Alu 2 176 0 424 274 95 25 chr17 40804996 40805364 -44633116 + L1M4 LINE L1 2957 3350 -2796 1961 131 0 3 chr17 40806333 40806662 -44631818 + AluY SINE Alu 1 328 0 993 263 88 85 chr17 40806713 40806896 -44631584 - L1ME4a LINE L1 -5 6116 5935 2485 141 50 29 chr17 40806896 40807315 -44631165 + MSTA LTR MaLR 1 428 0 993 263 88 85 chr17 40807315 40807922 -44630558 - L1ME4a LINE L1 -186 5935 5317 772 260 64 30 chr17 40808843 40809139 -44629341 - LTR16A LTR ERVL -9 441 136 1415 160 133 27 chr17 40809274 40809537 -44628943 - AluJb SINE Alu -21 291 1 4107 171 8 38 chr17 40809755 40810477 -44628003 + L1MB8 LINE L1 5429 6128 -50 1996 143 10 13 chr17 40810477 40810778 -44627702 + AluSx SINE Alu 1 300 -12 4107 171 8 38 chr17 40810778 40810828 -44627652 + L1MB8 LINE L1 6128 6178 0 1293 159 9 22 chr17 40811520 40811747 -44626733 + L1M4 LINE L1 5491 5714 -464 1653 175 7 7 chr17 40811755 40811890 -44626590 + AluJb SINE Alu 2 136 -176 2400 91 0 0 chr17 40811890 40812186 -44626294 + AluSc SINE Alu 1 296 -13 1653 175 7 7 chr17 40812186 40812336 -44626144 + AluJb SINE Alu 135 287 -25 477 155 93 0 chr17 40813087 40813184 -44625296 - MIR SINE MIR -25 237 132 2092 117 0 14 chr17 40814117 40814407 -44624073 - AluSx SINE Alu -26 286 1 1161 257 210 42 chr17 40816622 40816975 -44621505 + L2 LINE L2 2148 2440 -873 2058 127 7 3 chr17 40816975 40817275 -44621205 - AluSx SINE Alu -11 301 1 1161 257 210 42 chr17 40817275 40817923 -44620557 + L2 LINE L2 2440 3313 0 2934 87 11 3 chr17 40818077 40818447 -44620033 + THE1C LTR MaLR 3 375 0 7153 166 70 11 chr17 40818575 40819342 -44619138 + Looper DNA T2_type 3 723 -835 2675 92 20 11 chr17 40819342 40819700 -44618780 + THE1B LTR MaLR 4 364 0 7153 166 70 11 chr17 40819700 40820401 -44618079 + Looper DNA T2_type 723 1558 0 231 291 111 85 chr17 40820406 40820605 -44617875 + LTR16A LTR ERVL 247 450 0 294 338 0 0 chr17 40820605 40820682 -44617798 - MIR SINE MIR -87 121 45 193 277 46 15 chr17 40820792 40820857 -44617623 + MIR SINE MIR 102 168 -94 24 32 0 0 chr17 40821116 40821147 -44617333 + AT_rich Low_complexity Low_complexity 1 31 0 2684 36 0 10 chr17 40822026 40822335 -44616145 - AluY SINE Alu -5 306 1 184 375 14 14 chr17 40822388 40822460 -44616020 - MIR SINE MIR -103 105 34 256 303 16 0 chr17 40822760 40822882 -44615598 + (TTTA)n Simple_repeat Simple_repeat 3 126 0 226 120 67 0 chr17 40822884 40822959 -44615521 + (TA)n Simple_repeat Simple_repeat 1 80 0 1098 172 52 0 chr17 40822959 40823151 -44615329 - AluJb SINE Alu -27 285 84 207 279 163 23 chr17 40823205 40823291 -44615189 - L2 LINE L2 -16 3297 3200 1037 189 0 16 chr17 40823299 40823484 -44614996 + AluJo SINE Alu 87 268 -44 231 267 33 0 chr17 40824114 40824174 -44614306 - L2 LINE L2 -8 3264 3203 672 300 40 36 chr17 40824290 40824537 -44613943 + MIR SINE MIR 2 249 -13 22 0 0 0 chr17 40824717 40824739 -44613741 + AT_rich Low_complexity Low_complexity 1 22 0 353 321 38 0 chr17 40825256 40825362 -44613118 - MIR SINE MIR -65 143 34 345 303 95 10 chr17 40826156 40826332 -44612148 + MIR3 SINE MIR 1 187 -68 2159 110 0 0 chr17 40826969 40827259 -44611221 - AluSg SINE Alu -20 290 1 2123 125 10 0 chr17 40827259 40827562 -44610918 - AluSx SINE Alu -5 307 1 3792 163 5 2 chr17 40827759 40828353 -44610127 + MER77 LTR ERV1 3 598 -7 830 159 30 0 chr17 40829095 40829227 -44609253 + AluJo SINE Alu 2 137 -175 218 235 106 24 chr17 40829287 40829372 -44609108 + MIR3 SINE MIR 107 198 -10 23 0 0 0 chr17 40829379 40829402 -44609078 + AT_rich Low_complexity Low_complexity 1 23 0 798 250 64 13 chr17 40829413 40829649 -44608831 - MIR SINE MIR -2 260 13 1658 166 42 3 chr17 40830228 40830511 -44607969 - AluJb SINE Alu -18 294 1 208 352 0 0 chr17 40830548 40830602 -44607878 - MER91 DNA MER1_type -12 184 131 1039 169 21 0 chr17 40831068 40831257 -44607223 + L1MD3 LINE L1 7794 7986 -9 252 348 70 32 chr17 40831354 40831512 -44606968 - L2 LINE L2 -34 3238 3075 525 292 176 18 chr17 40831562 40831968 -44606512 + L2 LINE L2 2583 3084 -229 1933 240 55 16 chr17 40831968 40832514 -44605966 + MER74B LTR ERVL 56 622 0 180 94 0 94 chr17 40832515 40832547 -44605933 + L2 LINE L2 3200 3228 -85 1752 162 0 17 chr17 40833489 40833791 -44604689 - AluJo SINE Alu -15 297 1 529 200 0 0 chr17 40834331 40834416 -44604064 + MER21B LTR ERV1 12 96 -767 2824 226 50 25 chr17 40834421 40835103 -44603377 + MER21B LTR ERV1 41 739 -124 295 267 35 0 chr17 40835180 40835296 -44603184 - L1ME3A LINE L1 -219 5951 5832 1160 218 199 14 chr17 40835297 40835659 -44602821 - LTR16A LTR ERVL -1 449 21 1113 277 93 14 chr17 40835689 40835880 -44602600 - L1ME3A LINE L1 -339 5831 5656 2019 179 28 30 chr17 40835880 40836243 -44602237 - MLT1A1 LTR MaLR -3 362 1 1113 277 93 14 chr17 40836243 40836546 -44601934 - L1ME3A LINE L1 -514 5656 5298 192 217 0 0 chr17 40836579 40836625 -44601855 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 958 323 86 28 chr17 40836627 40837371 -44601109 - L1MEd LINE L1 -5063 1056 270 2673 102 54 27 chr17 40837530 40837875 -44600605 + MER83 LTR ERV1 3 362 -86 1763 166 13 13 chr17 40837875 40838176 -44600304 - AluSx SINE Alu -11 301 1 2673 102 54 27 chr17 40838176 40838240 -44600240 + MER83 LTR ERV1 362 423 -25 1633 122 0 0 chr17 40838290 40838504 -44599976 - AluSx SINE Alu -98 214 1 1234 273 120 13 chr17 40839293 40839814 -44598666 - L2 LINE L2 0 3313 2741 628 157 78 0 chr17 40839815 40839917 -44598563 - AluJb SINE Alu -16 296 187 722 269 45 15 chr17 40840031 40840232 -44598248 + MER63A DNA MER1_type 4 210 0 2325 95 65 9 chr17 40840344 40840680 -44597800 - THE1A LTR MaLR 0 355 1 349 248 124 16 chr17 40841267 40841396 -44597084 - MIR SINE MIR 0 262 120 4006 76 19 4 chr17 40842331 40842843 -44595637 + L1PA14 LINE L1 5639 6158 -3 553 252 13 50 chr17 40843061 40843220 -44595260 + MER63A DNA MER1_type 58 210 0 268 254 0 0 chr17 40843242 40843305 -44595175 - L1ME1 LINE L1 -31 6135 6073 244 167 109 7 chr17 40843537 40843592 -44594888 + L1ME2 LINE L1 6005 6060 -104 708 285 87 27 chr17 40845005 40845303 -44593177 - L3 LINE CR1 -11 1566 1251 447 68 0 0 chr17 40845480 40845539 -44592941 + (TG)n Simple_repeat Simple_repeat 2 60 0 582 294 44 18 chr17 40845619 40845847 -44592633 + MIR SINE MIR 28 261 -1 188 128 0 21 chr17 40846224 40846271 -44592209 + (TA)n Simple_repeat Simple_repeat 2 47 0 431 254 165 51 chr17 40846365 40846699 -44591781 + MARNA DNA Mariner 201 572 -14 25 0 0 0 chr17 40846830 40846855 -44591625 + AT_rich Low_complexity Low_complexity 1 25 0 2497 50 40 0 chr17 40847040 40847339 -44591141 + AluY SINE Alu 1 311 0 1289 91 0 0 chr17 40848198 40848363 -44590117 + AluSq SINE Alu 140 304 -9 4431 154 51 39 chr17 40849771 40849784 -44588696 - L1MA8 LINE L1 -10 6169 6158 2163 140 0 3 chr17 40849784 40850092 -44588388 + AluSx SINE Alu 1 307 -5 4431 154 51 39 chr17 40850092 40850406 -44588074 - L1MA8 LINE L1 -21 6158 5849 2363 73 0 10 chr17 40850406 40850706 -44587774 - AluY SINE Alu -14 297 1 4431 154 51 39 chr17 40850706 40852190 -44586290 - L1MA8 LINE L1 -330 5849 4346 4232 238 59 32 chr17 40852179 40853996 -44584484 - L1MA8 LINE L1 -2978 3056 1288 * 1070 40 0 0 chr17 40853996 40854121 -44584359 - L1PA8 LINE L1 -13 6159 6035 4232 238 59 32 chr17 40854121 40854784 -44583696 - L1MA8 LINE L1 -4746 1288 954 1981 167 0 0 chr17 40854784 40855078 -44583402 - AluJb SINE Alu -18 294 1 4232 238 59 32 chr17 40855078 40855851 -44582629 - L1MA8 LINE L1 -5080 954 203 1427 289 60 17 chr17 40855976 40856550 -44581930 - L1M3a LINE L1 -5501 454 12 2235 228 48 8 chr17 40856587 40857248 -44581232 - L1M4 LINE L1 -3251 2895 2208 263 305 32 21 chr17 40857245 40857340 -44581140 + L1ME LINE L1 5647 5742 -428 * 282 195 25 16 chr17 40857371 40857486 -44580994 - L1P5 LINE L1 -675 5479 5365 * 293 280 65 15 chr17 40857483 40857683 -44580797 - HAL1 LINE L1 -928 1579 1370 565 318 28 6 chr17 40858712 40858911 -44579569 + MIR SINE MIR 34 237 -25 342 67 0 0 chr17 40860074 40860119 -44578361 + (TTTC)n Simple_repeat Simple_repeat 1 45 0 2302 107 0 0 chr17 40860359 40860657 -44577823 - AluSx SINE Alu -9 303 6 242 322 70 61 chr17 40861844 40862058 -44576422 - MIR SINE MIR 0 262 47 2021 138 7 0 chr17 40862783 40863079 -44575401 - AluSx SINE Alu -14 298 1 1978 125 7 24 chr17 40864308 40864603 -44573877 - AluSx SINE Alu -11 301 12 24 32 0 0 chr17 40864727 40864758 -44573722 + AT_rich Low_complexity Low_complexity 1 31 0 261 163 23 0 chr17 40865149 40865192 -44573288 - L2 LINE L2 -40 3273 3230 21 0 0 0 chr17 40865958 40865979 -44572501 + AT_rich Low_complexity Low_complexity 1 21 0 560 136 29 100 chr17 40866220 40866360 -44572120 - FLAM_C SINE Alu -1 132 3 30 27 0 0 chr17 40866975 40867012 -44571468 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr17 40867220 40867248 -44571232 + AT_rich Low_complexity Low_complexity 1 28 0 961 200 91 9 chr17 40868381 40868601 -44569879 + MIR SINE MIR 4 241 -21 2508 37 7 3 chr17 40868749 40869045 -44569435 + AluY SINE Alu 10 306 -5 2804 139 13 2 chr17 40869061 40869534 -44568946 - L1MC1 LINE L1 -202 6131 5654 184 310 184 0 chr17 40870159 40870246 -44568234 + L2 LINE L2 3155 3257 -15 273 326 28 73 chr17 40872056 40872234 -44566246 + MIR SINE MIR 10 179 -83 1978 133 35 13 chr17 40872466 40872841 -44565639 - L1MA5 LINE L1 0 6300 5918 791 212 7 7 chr17 40873539 40873690 -44564790 - FRAM SINE Alu -15 151 1 2242 42 42 11 chr17 40874203 40874517 -44563963 + AluY SINE Alu 1 311 0 2256 103 3 0 chr17 40875063 40875353 -44563127 - AluSx SINE Alu -21 291 1 22 56 0 0 chr17 40875509 40875545 -44562935 + AT_rich Low_complexity Low_complexity 1 36 0 335 218 39 0 chr17 40876735 40876813 -44561667 + MIR3 SINE MIR 106 186 -22 1911 140 11 3 chr17 40877179 40877465 -44561015 - AluJb SINE Alu -14 298 11 1887 186 16 27 chr17 40877572 40877913 -44560567 + MER45R DNA AcHobo 1145 1481 -100 2326 91 14 0 chr17 40877913 40878210 -44560270 - AluSx SINE Alu -11 301 1 1887 186 16 27 chr17 40878210 40878308 -44560172 + MER45R DNA AcHobo 1481 1579 -2 336 257 75 47 chr17 40878436 40878821 -44559659 + HAL1 LINE L1 786 1181 -1326 2275 103 0 0 chr17 40878852 40879144 -44559336 - AluSx SINE Alu -19 293 2 1961 196 13 47 chr17 40879146 40879616 -44558864 + MER101 LTR ERV1 21 474 0 314 270 57 43 chr17 40879631 40879649 -44558831 + HAL1 LINE L1 1167 1183 -1324 2483 43 30 3 chr17 40879649 40879952 -44558528 + AluY SINE Alu 1 311 0 314 270 57 43 chr17 40879952 40880163 -44558317 + HAL1 LINE L1 1183 1399 -1108 2240 107 0 10 chr17 40880301 40880601 -44557879 + AluSx SINE Alu 1 297 -15 461 186 0 0 chr17 40880728 40880814 -44557666 + HAL1 LINE L1 1617 1702 -805 323 305 48 38 chr17 40880883 40880988 -44557492 + HAL1 LINE L1 1822 1927 -580 2171 112 3 0 chr17 40881402 40881689 -44556791 - AluSx SINE Alu -24 288 1 3553 212 37 51 chr17 40883038 40883516 -44554964 + MER45B DNA AcHobo 1 484 -1097 2216 112 0 0 chr17 40883516 40883810 -44554670 - AluSx SINE Alu -18 294 1 3553 212 37 51 chr17 40883810 40884204 -44554276 + MER45B DNA AcHobo 484 862 -719 1757 133 78 36 chr17 40884204 40884564 -44553916 + THE1C LTR MaLR 1 375 0 3553 212 37 51 chr17 40884564 40884635 -44553845 + MER45B DNA AcHobo 862 932 -108 204 40 0 0 chr17 40884638 40884663 -44553817 + (CAA)n Simple_repeat Simple_repeat 2 26 0 623 250 0 7 chr17 40884690 40884838 -44553642 + MER45B DNA AcHobo 894 1040 0 1322 194 85 0 chr17 40885179 40885472 -44553008 + MER58B DNA MER1_type 24 341 0 2207 101 0 0 chr17 40886454 40886730 -44551750 + AluSx SINE Alu 14 289 -23 213 39 0 0 chr17 40886733 40886759 -44551721 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 308 246 166 23 chr17 40887746 40887921 -44550559 + MER20B DNA MER1_type 19 218 -565 367 237 116 35 chr17 40888597 40888770 -44549710 + MER20B DNA MER1_type 593 779 -4 2184 123 0 0 chr17 40939188 40939481 -44498999 + AluSx SINE Alu 4 296 -16 236 328 67 0 chr17 40939703 40939822 -44498658 + L2 LINE L2 3132 3258 -14 532 219 144 0 chr17 40939868 40940014 -44498466 + MER91A DNA MER1_type 30 196 0 1113 171 0 0 chr17 40940423 40940610 -44497870 - MER53 DNA DNA -2 187 1 1500 158 23 81 chr17 40940680 40940826 -44497654 - MER50 LTR ERV1 -23 711 558 2723 17 0 0 chr17 40940826 40941126 -44497354 + AluY SINE Alu 1 300 -11 1500 158 23 81 chr17 40941126 40941137 -44497343 - MER50 LTR ERV1 -176 558 548 1877 157 4 0 chr17 40941137 40941444 -44497036 + AluSx SINE Alu 1 308 0 1500 158 23 81 chr17 40941444 40941594 -44496886 - MER50 LTR ERV1 -186 548 420 2245 115 0 3 chr17 40942098 40942402 -44496078 - AluSq SINE Alu -10 303 1 933 81 6 12 chr17 40942928 40943088 -44495392 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 1366 96 30 5 chr17 40943088 40943287 -44495193 + MER4B-int LTR ERV1 945 1148 -5610 318 26 0 0 chr17 40943288 40943327 -44495153 + (TG)n Simple_repeat Simple_repeat 2 40 0 4328 81 74 10 chr17 40943349 40944037 -44494443 + MER4B-int LTR ERV1 1764 2495 -4103 1236 188 75 0 chr17 40944037 40944276 -44494204 - LTR8 LTR ERV1 -434 257 1 444 19 0 0 chr17 40944276 40944329 -44494151 + MER41-int LTR ERV1 2737 2789 -3809 * 2506 144 156 41 chr17 40944328 40944981 -44493499 + MER41-int LTR ERV1 2954 3681 -2917 * 4241 110 55 22 chr17 40944980 40945671 -44492809 + MER41-int LTR ERV1 3837 4550 -2048 8047 109 15 12 chr17 40945673 40946872 -44491608 + MER41-int LTR ERV1 3970 5172 -774 1767 220 68 103 chr17 40946872 40947834 -44490646 + LTR1B LTR ERV1 1 1020 0 4345 119 44 21 chr17 40947834 40948554 -44489926 + MER4A-int LTR ERV1 5862 6598 0 644 124 0 10 chr17 40948557 40948654 -44489826 + MER4A LTR ERV1 3 98 -566 1979 111 3 22 chr17 40948656 40949006 -44489474 + MER4A LTR ERV1 263 664 0 482 253 89 68 chr17 40949352 40949645 -44488835 + LTR43 LTR ERV1 180 478 -124 307 305 116 90 chr17 40950826 40951180 -44487300 - L1M2 LINE L1 -6047 802 440 1894 127 45 14 chr17 40951987 40952279 -44486201 - AluSc SINE Alu -8 301 1 230 305 26 95 chr17 40952582 40952772 -44485708 - MIR SINE MIR -13 249 73 304 349 102 40 chr17 40952820 40953144 -44485336 + L2 LINE L2 2928 3271 -1 607 280 16 26 chr17 40953557 40953746 -44484734 - LTR16C LTR ERVL 0 491 305 1658 42 0 0 chr17 40953914 40954103 -44484377 + L1PA5 LINE L1 5964 6152 -2 429 228 24 0 chr17 40954629 40954752 -44483728 - LTR16A LTR ERVL -5 445 320 316 82 0 118 chr17 40954759 40954844 -44483636 + (GGGGA)n Simple_repeat Simple_repeat 4 78 0 351 305 157 73 chr17 40955343 40955988 -44482492 + L1M2 LINE L1 497 1195 -5654 3590 57 4 0 chr17 40957099 40957559 -44480921 - L1P LINE L1 -832 5322 4854 7548 31 3 6 chr17 40957559 40958441 -44480039 + L1PA4 LINE L1 5293 6155 0 580 162 0 10 chr17 40958797 40958896 -44479584 + MER4A LTR ERV1 1 98 -566 1558 134 149 129 chr17 40958896 40959292 -44479188 + MER4A LTR ERV1 261 664 0 2149 114 260 106 chr17 40959305 40959890 -44478590 + MER4A-int LTR ERV1 12 686 -5912 995 229 53 12 chr17 40960036 40960280 -44478200 + MER4A-int LTR ERV1 1848 2101 -4230 1108 107 0 6 chr17 40960360 40960519 -44477961 + MER4B-int LTR ERV1 194 351 -6407 * 1534 112 0 14 chr17 40960516 40960730 -44477750 + MER4B-int LTR ERV1 637 847 -5911 4278 81 0 2 chr17 40960774 40961329 -44477151 + L1PA8A LINE L1 5547 6100 -31 793 44 18 9 chr17 40961349 40961463 -44477017 + (GAAA)n Simple_repeat Simple_repeat 4 118 0 1419 77 31 5 chr17 40961463 40961659 -44476821 + MER4B-int LTR ERV1 945 1145 -5613 369 0 0 0 chr17 40961659 40961700 -44476780 + (TG)n Simple_repeat Simple_repeat 2 42 0 4479 76 73 9 chr17 40961718 40962406 -44476074 + MER4B-int LTR ERV1 1764 2495 -4103 493 225 90 13 chr17 40962406 40962558 -44475922 - LTR8 LTR ERV1 -361 180 78 1923 160 117 32 chr17 40962558 40963065 -44475415 + MER41-int LTR ERV1 3149 3681 -2917 * 8209 106 40 17 chr17 40963064 40964966 -44473514 + MER41-int LTR ERV1 3837 5172 -774 1800 219 75 110 chr17 40964966 40965928 -44472552 + LTR1B LTR ERV1 1 1020 0 3877 137 49 25 chr17 40965929 40966643 -44471837 + MER4A-int LTR ERV1 5863 6593 -5 664 121 0 10 chr17 40966654 40966753 -44471727 + MER4A LTR ERV1 1 98 -566 1864 126 3 25 chr17 40966755 40967104 -44471376 + MER4A LTR ERV1 263 662 -2 458 254 90 66 chr17 40967452 40967811 -44470669 + LTR43 LTR ERV1 180 453 -59 301 334 141 38 chr17 40969014 40969334 -44469146 - L1M2 LINE L1 -6047 802 450 2062 139 0 3 chr17 40970179 40970482 -44467998 - AluSc SINE Alu -7 302 1 277 290 43 91 chr17 40970785 40970971 -44467509 - MIR SINE MIR -13 249 73 361 339 102 43 chr17 40971019 40971344 -44467136 + L2 LINE L2 2928 3271 -1 580 300 11 21 chr17 40971755 40971945 -44466535 - LTR16C LTR ERVL 0 491 304 1427 78 0 0 chr17 40972121 40972300 -44466180 + L1PA5 LINE L1 5975 6153 -1 26 50 0 0 chr17 40972635 40972675 -44465805 + AT_rich Low_complexity Low_complexity 1 40 0 501 198 11 0 chr17 40972816 40972907 -44465573 - LTR16A LTR ERVL -5 445 354 285 29 0 0 chr17 40972909 40972943 -44465537 + (GGGGA)n Simple_repeat Simple_repeat 4 37 0 348 304 105 33 chr17 40973213 40973394 -44465086 - PRIMA41-int LTR ERV1 -406 7350 7157 767 231 6 0 chr17 40973758 40973914 -44464566 - HERVL32 LTR ERVL -1889 1529 1373 255 303 10 7 chr17 40974241 40974348 -44464132 - MLT1H LTR MaLR 0 583 478 778 191 29 0 chr17 40974408 40974581 -44463899 + MER53 DNA DNA 1 178 -11 1321 114 0 0 chr17 40974879 40975054 -44463426 + AluSq SINE Alu 5 179 -134 2172 120 3 0 chr17 40976575 40976874 -44461606 - AluSp SINE Alu -13 300 1 1708 176 0 27 chr17 40978001 40978302 -44460178 - AluJo SINE Alu -15 297 5 265 303 106 21 chr17 40978478 40978620 -44459860 - HAL1b LINE L1 -686 662 509 780 195 0 0 chr17 40978627 40978755 -44459725 - FRAM SINE Alu -33 143 16 449 277 134 95 chr17 40979291 40980151 -44458329 + HAL1 LINE L1 371 1263 -1244 689 223 0 0 chr17 40980171 40980292 -44458188 + FLAM_A SINE Alu 10 130 -12 961 146 4 8 chr17 40980295 40980549 -44457931 + GA-rich Low_complexity Low_complexity 1 253 0 281 182 40 20 chr17 40980565 40980664 -44457816 + GA-rich Low_complexity Low_complexity 4 104 0 1883 265 67 14 chr17 40980666 40981304 -44457176 + HAL1 LINE L1 1246 1917 -590 445 231 38 75 chr17 40981307 40981467 -44457013 - HAL1 LINE L1 -166 2341 2188 1873 155 36 19 chr17 40981505 40982049 -44456431 + L1MA9 LINE L1 5384 6179 -133 1873 149 46 3 chr17 40982049 40982365 -44456115 + L1MA9 LINE L1 5969 6305 -7 1873 155 36 19 chr17 40982365 40982495 -44455985 + L1MA9 LINE L1 6179 6305 -7 1688 220 20 3 chr17 40983292 40983642 -44454838 - L1PB4 LINE L1 -3 6153 5798 1565 228 33 27 chr17 40983687 40984021 -44454459 - Tigger7 DNA MER2_type -214 336 1 5413 244 99 20 chr17 40984024 40984473 -44454007 + MSTD-int LTR MaLR 126 538 -1197 1829 42 5 0 chr17 40984473 40984688 -44453792 + L1PA4 LINE L1 5937 6152 -3 5413 244 99 20 chr17 40984688 40985730 -44452750 + MSTD-int LTR MaLR 538 1735 0 1145 175 139 9 chr17 40985730 40985953 -44452527 + MSTD LTR MaLR 1 252 -144 287 355 99 37 chr17 40986190 40986514 -44451966 - L2 LINE L2 -1 3271 2928 235 249 65 101 chr17 40986561 40986730 -44451750 + MIR SINE MIR 72 234 -28 363 304 157 73 chr17 40987720 40988365 -44450115 + L1M2 LINE L1 497 1195 -5654 3638 53 4 0 chr17 40989476 40989936 -44448544 - L1P LINE L1 -832 5322 4854 7600 27 5 5 chr17 40989936 40990816 -44447664 + L1PA4 LINE L1 5293 6155 0 580 162 0 10 chr17 40991172 40991271 -44447209 + MER4A LTR ERV1 1 98 -566 1542 136 149 129 chr17 40991271 40991667 -44446813 + MER4A LTR ERV1 261 664 0 2096 117 258 112 chr17 40991680 40992269 -44446211 + MER4A-int LTR ERV1 12 686 -5912 991 233 49 12 chr17 40992415 40992660 -44445820 + MER4A-int LTR ERV1 1848 2101 -4230 1108 107 0 6 chr17 40992740 40992899 -44445581 + MER4B-int LTR ERV1 194 351 -6407 * 1497 122 0 14 chr17 40992896 40993110 -44445370 + MER4B-int LTR ERV1 637 847 -5911 4266 83 0 2 chr17 40993154 40993709 -44444771 + L1PA8A LINE L1 5547 6100 -31 868 48 16 8 chr17 40993729 40993855 -44444625 + (GAAA)n Simple_repeat Simple_repeat 4 130 0 1419 77 31 5 chr17 40993855 40994051 -44444429 + MER4B-int LTR ERV1 945 1145 -5613 351 0 0 0 chr17 40994051 40994090 -44444390 + (TG)n Simple_repeat Simple_repeat 2 40 0 4436 76 74 9 chr17 40994108 40994795 -44443685 + MER4B-int LTR ERV1 1764 2495 -4103 493 225 90 13 chr17 40994795 40994947 -44443533 - LTR8 LTR ERV1 -361 180 78 1923 160 117 32 chr17 40994947 40995454 -44443026 + MER41-int LTR ERV1 3149 3681 -2917 * 8209 106 40 17 chr17 40995453 40997355 -44441125 + MER41-int LTR ERV1 3837 5172 -774 1792 218 78 113 chr17 40997355 40998317 -44440163 + LTR1B LTR ERV1 1 1020 0 3909 137 49 24 chr17 40998318 40999031 -44439449 + MER4A-int LTR ERV1 5863 6593 -5 664 121 0 10 chr17 40999042 40999141 -44439339 + MER4A LTR ERV1 1 98 -566 1864 126 3 25 chr17 40999143 40999492 -44438988 + MER4A LTR ERV1 263 662 -2 353 248 94 73 chr17 40999847 41000133 -44438347 + LTR43 LTR ERV1 187 478 -124 333 347 134 31 chr17 41001402 41001722 -44436758 - L1M2 LINE L1 -6047 802 450 2075 139 0 3 chr17 41002567 41002870 -44435610 - AluSc SINE Alu -7 302 1 300 290 43 91 chr17 41003173 41003359 -44435121 - MIR SINE MIR -13 249 73 389 332 102 43 chr17 41003407 41003732 -44434748 + L2 LINE L2 2928 3271 -1 518 300 11 21 chr17 41004143 41004333 -44434147 - LTR16C LTR ERVL 0 491 304 1336 78 0 0 chr17 41004509 41004688 -44433792 + L1PA5 LINE L1 5975 6153 -1 26 50 0 0 chr17 41005023 41005063 -44433417 + AT_rich Low_complexity Low_complexity 1 40 0 420 207 41 0 chr17 41005204 41005325 -44433155 - LTR16A LTR ERVL -5 445 320 529 134 0 79 chr17 41005325 41005489 -44432991 + (GGGGA)n Simple_repeat Simple_repeat 2 152 0 243 281 0 0 chr17 41005580 41005662 -44432818 + (CAG)n Simple_repeat Simple_repeat 3 84 0 3546 248 123 24 chr17 41005937 41007104 -44431376 + MSTD-int LTR MaLR 453 1735 0 1004 198 121 9 chr17 41007104 41007336 -44431144 + MSTD LTR MaLR 1 258 -138 208 375 98 40 chr17 41007568 41007893 -44430587 - L2 LINE L2 -1 3271 2928 266 286 55 82 chr17 41007941 41008123 -44430357 + MIR SINE MIR 73 249 -13 328 279 146 91 chr17 41009220 41009739 -44428741 + L1M2 LINE L1 528 1075 -5774 279 79 0 0 chr17 41010407 41010445 -44428035 + (TG)n Simple_repeat Simple_repeat 1 38 0 536 162 0 10 chr17 41011242 41011341 -44427139 + MER4A LTR ERV1 1 98 -566 1654 126 159 73 chr17 41011341 41011713 -44426767 + MER4A LTR ERV1 261 664 0 1410 167 186 87 chr17 41011716 41012340 -44426140 + MER4A-int LTR ERV1 1 686 -5912 954 231 41 8 chr17 41012488 41012731 -44425749 + MER4A-int LTR ERV1 1851 2101 -4230 997 119 0 6 chr17 41012811 41012970 -44425510 + MER4B-int LTR ERV1 194 351 -6407 * 1414 117 0 14 chr17 41012967 41013181 -44425299 + MER4B-int LTR ERV1 637 847 -5911 4064 79 0 5 chr17 41013225 41013785 -44424695 + L1PA8A LINE L1 5547 6103 -28 969 79 6 12 chr17 41013800 41013964 -44424516 + (GAAA)n Simple_repeat Simple_repeat 4 166 0 1259 96 30 5 chr17 41013964 41014163 -44424317 + MER4B-int LTR ERV1 945 1148 -5610 336 24 0 0 chr17 41014164 41014205 -44424275 + (TG)n Simple_repeat Simple_repeat 2 42 0 3938 81 74 10 chr17 41014227 41014915 -44423565 + MER4B-int LTR ERV1 1764 2495 -4103 1126 188 75 0 chr17 41014915 41015154 -44423326 - LTR8 LTR ERV1 -434 257 1 412 19 0 0 chr17 41015154 41015207 -44423273 + MER41-int LTR ERV1 2737 2789 -3809 * 2154 146 156 41 chr17 41015206 41015859 -44422621 + MER41-int LTR ERV1 2954 3681 -2917 * 3870 109 55 22 chr17 41015858 41016547 -44421933 + MER41-int LTR ERV1 3837 4548 -2050 7408 109 15 12 chr17 41016551 41017750 -44420730 + MER41-int LTR ERV1 3970 5172 -774 1535 222 68 102 chr17 41017750 41018711 -44419769 + LTR1B LTR ERV1 1 1020 0 3960 122 46 21 chr17 41018711 41019430 -44419050 + MER4A-int LTR ERV1 5862 6598 0 599 124 0 10 chr17 41019433 41019530 -44418950 + MER4A LTR ERV1 3 98 -566 1834 111 3 22 chr17 41019532 41019882 -44418598 + MER4A LTR ERV1 263 664 0 378 252 91 70 chr17 41020235 41020521 -44417959 + LTR43 LTR ERV1 187 478 -124 345 301 237 53 chr17 41021595 41022084 -44416396 - L1M2 LINE L1 -5774 1075 497 1981 121 45 10 chr17 41022758 41023048 -44415432 - AluSc SINE Alu -9 300 1 246 311 26 95 chr17 41023351 41023541 -44414939 - MIR SINE MIR -13 249 73 334 343 102 40 chr17 41023589 41023913 -44414567 + L2 LINE L2 2928 3271 -1 542 318 0 11 chr17 41024325 41024514 -44413966 - LTR16C LTR ERVL 0 491 305 1559 42 0 0 chr17 41024682 41024871 -44413609 + L1PA5 LINE L1 5964 6152 -2 743 288 46 4 chr17 41025397 41025482 -44412998 - LTR16A LTR ERVL -5 445 365 845 57 0 43 chr17 41025482 41025623 -44412857 + (GGGAA)n Simple_repeat Simple_repeat 1 135 0 743 288 46 4 chr17 41025623 41025777 -44412703 - LTR16A LTR ERVL -85 365 196 2390 141 60 7 chr17 41026079 41026513 -44411967 + L1PA16 LINE L1 5701 6157 -9 423 306 149 63 chr17 41027282 41027805 -44410675 - L1M2 LINE L1 -5776 1073 506 381 296 31 31 chr17 41028904 41029066 -44409414 - MIR SINE MIR -2 260 99 24 32 0 0 chr17 41029152 41029183 -44409297 + AT_rich Low_complexity Low_complexity 1 31 0 1654 68 5 9 chr17 41029210 41029429 -44409051 + L1PA8 LINE L1 5952 6169 -3 1498 170 0 76 chr17 41029546 41029835 -44408645 + AluSx SINE Alu 1 267 -45 1014 259 123 35 chr17 41029893 41030406 -44408074 + L1MC4a LINE L1 5351 5908 -1900 262 200 0 62 chr17 41030529 41030609 -44407871 + L1MA9 LINE L1 6238 6312 0 2041 114 4 4 chr17 41030647 41030959 -44407521 - AluSg1 SINE Alu 0 312 1 345 296 54 65 chr17 41030985 41031171 -44407309 + L1MC4a LINE L1 6054 6237 -1571 550 312 42 0 chr17 41031449 41031698 -44406782 + L1MC5 LINE L1 6638 6875 -1086 7376 206 1 1 chr17 41031799 41033450 -44405030 + L1 LINE L1 3235 4885 -1261 455 311 53 37 chr17 41033579 41033901 -44404579 - L1MEc LINE L1 -3710 2505 2179 23 54 0 0 chr17 41033901 41033938 -44404542 + AT_rich Low_complexity Low_complexity 1 37 0 458 269 85 18 chr17 41034500 41034723 -44403757 - HAL1b LINE L1 -767 581 344 693 150 0 0 chr17 41034805 41034938 -44403542 + L1 LINE L1 2322 2454 -3692 288 259 155 0 chr17 41035060 41035176 -44403304 + MER39 LTR ERV1 1 134 -573 377 188 25 0 chr17 41035241 41035321 -44403159 + LTR48 LTR ERV1 380 461 -326 * 480 191 100 24 chr17 41035291 41035483 -44402997 + LTR48 LTR ERV1 384 740 -38 2648 248 52 5 chr17 41036025 41036871 -44401609 + L1MC4 LINE L1 6946 7831 -211 378 145 128 60 chr17 41036901 41037018 -44401462 + L1MC4 LINE L1 7918 8042 0 673 185 25 13 chr17 41037069 41037226 -44401254 - MER57A LTR ERV1 0 403 245 192 77 0 0 chr17 41037336 41037362 -44401118 + (A)n Simple_repeat Simple_repeat 1 26 0 1395 142 4 58 chr17 41037362 41037637 -44400843 - MER57A LTR ERV1 -143 260 1 22 0 0 0 chr17 41038457 41038479 -44400001 + AT_rich Low_complexity Low_complexity 1 22 0 591 39 0 0 chr17 41038728 41038806 -44399674 + L1PA8 LINE L1 5989 6066 -106 1939 138 0 0 chr17 41038806 41039081 -44399399 + AluSc SINE Alu 1 275 -34 1730 129 0 4 chr17 41039181 41039429 -44399051 - AluSq SINE Alu -66 247 1 3257 147 36 65 chr17 41039686 41039802 -44398678 - L1MA9 LINE L1 -35 6277 6159 246 62 0 0 chr17 41039802 41039834 -44398646 + (TG)n Simple_repeat Simple_repeat 1 32 0 3257 147 36 65 chr17 41039834 41040230 -44398250 - L1MA9 LINE L1 -153 6159 5791 318 106 0 0 chr17 41040230 41040277 -44398203 + (TG)n Simple_repeat Simple_repeat 2 48 0 3257 147 36 65 chr17 41040277 41040512 -44397968 - L1MA9 LINE L1 -521 5791 5551 457 284 81 25 chr17 41040509 41041151 -44397329 - L1MEc LINE L1 -4927 1469 792 * 1730 50 0 88 chr17 41041378 41041638 -44396842 - L1PA6 LINE L1 0 6154 5918 423 292 43 52 chr17 41041660 41041893 -44396587 + L2 LINE L2 2001 2231 -1083 372 304 138 76 chr17 41043380 41043909 -44394571 - L1M2 LINE L1 -5654 1195 634 1143 198 70 17 chr17 41044897 41045199 -44393281 + LTR38 LTR ERV1 121 452 -158 248 157 0 0 chr17 41045251 41045302 -44393178 - LTR49 LTR ERV1 -544 51 1 342 210 24 12 chr17 41045386 41045499 -44392981 + LTR38 LTR ERV1 425 556 0 2199 121 3 16 chr17 41045527 41045842 -44392638 - AluSq SINE Alu -2 311 1 210 274 39 0 chr17 41046031 41046082 -44392398 - L2 LINE L2 -94 3219 3167 2684 136 46 31 chr17 41046159 41046367 -44392113 - LTR49 LTR ERV1 -42 553 350 2430 104 39 8 chr17 41046367 41046731 -44391749 - THE1C LTR MaLR 0 375 1 2684 136 46 31 chr17 41046731 41047065 -44391415 - LTR49 LTR ERV1 -245 350 3 242 238 32 16 chr17 41047218 41047281 -44391199 + L2 LINE L2 3167 3230 -83 719 224 0 14 chr17 41047600 41047747 -44390733 - LTR8 LTR ERV1 0 691 547 1727 111 41 4 chr17 41047751 41048022 -44390458 - LTR8A LTR ERV1 -446 281 1 2255 128 0 3 chr17 41048126 41048438 -44390042 + AluY SINE Alu 1 311 0 21 36 0 0 chr17 41048516 41048544 -44389936 + AT_rich Low_complexity Low_complexity 1 28 0 667 111 8 17 chr17 41048934 41049051 -44389429 + (TTCC)n Simple_repeat Simple_repeat 3 118 0 539 311 116 0 chr17 41049130 41049320 -44389160 - MIR SINE MIR -42 220 9 363 317 93 35 chr17 41049376 41049742 -44388738 - L1M4 LINE L1 -991 5155 4769 250 281 31 31 chr17 41049808 41049936 -44388544 - MER70-int LTR ERVL -3605 1418 1291 396 243 45 0 chr17 41050559 41050670 -44387810 + LTR33 LTR ERVL 342 457 -64 788 89 8 0 chr17 41051596 41051719 -44386761 + (GGAA)n Simple_repeat Simple_repeat 3 126 0 261 203 0 31 chr17 41051720 41051784 -44386696 + GA-rich Low_complexity Low_complexity 4 65 0 1890 147 11 0 chr17 41052072 41052391 -44386089 - AluSx SINE Alu 0 322 1 542 310 83 5 chr17 41052422 41052638 -44385842 - MIR SINE MIR -28 234 2 222 37 0 0 chr17 41052681 41052708 -44385772 + (CA)n Simple_repeat Simple_repeat 2 28 0 341 280 212 67 chr17 41053066 41053651 -44384829 - L1M2 LINE L1 -5936 913 244 337 229 0 31 chr17 41054408 41054504 -44383976 - L1MD2 LINE L1 -23 6336 6244 5881 171 29 12 chr17 41054607 41056692 -44381788 - L1MA8 LINE L1 -3 6288 4171 4696 179 18 23 chr17 41056714 41057667 -44380813 - L1PB4 LINE L1 -26 6832 5875 3772 90 62 0 chr17 41057667 41058213 -44380267 + LTR19B LTR ERV1 1 580 0 4696 179 18 23 chr17 41058213 41058371 -44380109 - L1PB4 LINE L1 -983 5875 5718 2255 108 0 0 chr17 41058371 41058667 -44379813 - AluSx SINE Alu -16 296 1 4696 179 18 23 chr17 41058667 41059493 -44378987 - L1PB4 LINE L1 -1140 5718 4914 910 222 4 0 chr17 41059490 41059724 -44378756 - L1 LINE L1 -966 5180 4946 * 3700 200 6 13 chr17 41059722 41060566 -44377914 - L1PB4 LINE L1 -1932 4916 4079 754 250 9 9 chr17 41060599 41060811 -44377669 + L1MD2 LINE L1 6135 6346 -13 241 351 60 36 chr17 41060870 41061038 -44377442 - MIR SINE MIR -70 192 21 782 299 52 17 chr17 41061573 41061861 -44376619 + LTR16A1 LTR ERVL 160 457 0 2240 135 0 0 chr17 41061957 41062261 -44376219 + AluSx SINE Alu 1 304 -8 684 161 0 0 chr17 41062313 41062437 -44376043 + GA-rich Low_complexity Low_complexity 3 126 0 1124 227 87 2 chr17 41062532 41062912 -44375568 + L1MA4 LINE L1 5866 6300 0 624 312 173 0 chr17 41062953 41063341 -44375139 - LTR16C LTR ERVL 0 491 37 22 70 0 0 chr17 41063465 41063508 -44374972 + AT_rich Low_complexity Low_complexity 1 43 0 201 284 0 0 chr17 41063814 41063888 -44374592 + (CAG)n Simple_repeat Simple_repeat 3 76 0 336 274 152 97 chr17 41063983 41064509 -44373971 - L1PB4 LINE L1 -5459 1390 446 619 160 17 28 chr17 41065379 41065560 -44372920 + (TA)n Simple_repeat Simple_repeat 1 179 0 213 74 0 0 chr17 41065560 41065587 -44372893 + (TG)n Simple_repeat Simple_repeat 1 27 0 234 0 0 0 chr17 41065587 41065613 -44372867 + (TA)n Simple_repeat Simple_repeat 1 26 0 219 69 0 0 chr17 41065612 41065641 -44372839 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 341 156 44 7 chr17 41065840 41065975 -44372505 + (TA)n Simple_repeat Simple_repeat 2 141 0 321 47 0 0 chr17 41066017 41066060 -44372420 + (CA)n Simple_repeat Simple_repeat 1 43 0 184 365 54 14 chr17 41066219 41066367 -44372113 + L3 LINE CR1 671 824 -753 1248 182 22 0 chr17 41066512 41066743 -44371737 + MER46A DNA MER2_type 1 236 0 228 320 125 43 chr17 41067026 41067417 -44371063 + L3 LINE CR1 1051 1473 -104 1275 167 23 8 chr17 41067979 41068236 -44370244 - L1MA9 LINE L1 0 6312 6052 479 233 68 0 chr17 41068236 41068369 -44370111 + L1MD2 LINE L1 6197 6338 -21 6280 27 1 5 chr17 41069730 41070510 -44367970 - L1PA2 LINE L1 0 6155 5379 227 397 16 8 chr17 41070567 41070693 -44367787 - MIR SINE MIR -108 154 28 316 282 187 78 chr17 41071409 41071906 -44366574 - L1M2 LINE L1 -5746 1103 553 258 32 0 0 chr17 41072691 41072722 -44365758 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr17 41072819 41072848 -44365632 + AT_rich Low_complexity Low_complexity 1 29 0 800 218 34 89 chr17 41072872 41072977 -44365503 - L1ME2 LINE L1 -15 6149 6040 2227 109 5 102 chr17 41072977 41073380 -44365100 + THE1B LTR MaLR 1 364 0 800 218 34 89 chr17 41073380 41073623 -44364857 - L1ME2 LINE L1 -124 6040 5820 366 295 18 0 chr17 41073680 41073792 -44364688 + MER81 DNA DNA 1 114 0 620 238 48 6 chr17 41074173 41074341 -44364139 - MER5B DNA MER1_type 0 178 4 22 56 0 0 chr17 41075223 41075259 -44363221 + AT_rich Low_complexity Low_complexity 1 36 0 32 81 0 0 chr17 41075439 41075513 -44362967 + AT_rich Low_complexity Low_complexity 1 74 0 233 265 31 0 chr17 41075713 41075811 -44362669 - L1ME3A LINE L1 -206 5964 5864 1348 247 127 51 chr17 41075817 41076368 -44362112 + MLT1E LTR MaLR 1 593 0 1942 86 0 8 chr17 41076428 41076683 -44361797 + AluSc SINE Alu 41 293 -16 464 372 16 31 chr17 41076759 41077076 -44361404 + ERVL LTR ERVL 1239 1550 -3446 222 282 10 10 chr17 41077135 41077204 -44361276 + (TA)n Simple_repeat Simple_repeat 2 73 -31 2229 170 23 28 chr17 41077204 41077640 -44360840 + Tigger2a DNA MER2_type 1 434 0 222 282 10 10 chr17 41077640 41077673 -44360807 + (TA)n Simple_repeat Simple_repeat 72 104 0 476 237 10 0 chr17 41077708 41077805 -44360675 + ERVL LTR ERVL 1703 1800 -3196 506 348 75 25 chr17 41077876 41078683 -44359797 + ERVL LTR ERVL 1905 2806 -2870 545 332 51 47 chr17 41078802 41079780 -44358700 + ERVL LTR ERVL 4243 5283 -481 698 282 72 94 chr17 41079892 41080307 -44358173 + LTR16A1 LTR ERVL 21 426 -31 736 305 125 0 chr17 41080713 41081074 -44357406 - LTR16C LTR ERVL 0 491 86 301 327 93 76 chr17 41081544 41081899 -44356581 - L1M2 LINE L1 -6043 806 446 267 54 0 0 chr17 41083775 41083812 -44354668 + (TG)n Simple_repeat Simple_repeat 2 38 0 2416 153 52 10 chr17 41083883 41084380 -44354100 - L1MA9 LINE L1 0 6312 5795 198 0 0 0 chr17 41084380 41084402 -44354078 + (TG)n Simple_repeat Simple_repeat 2 23 0 665 323 0 9 chr17 41084404 41084636 -44353844 - L1M3b LINE L1 -5085 1694 1465 226 314 23 0 chr17 41084751 41084837 -44353643 + CT-rich Low_complexity Low_complexity 4 91 0 2291 75 0 0 chr17 41084931 41085211 -44353269 - AluY SINE Alu -19 292 13 2462 73 0 0 chr17 41085920 41086220 -44352260 + AluY SINE Alu 1 300 -11 231 291 141 50 chr17 41087494 41087693 -44350787 + L2 LINE L2 3054 3270 -2 314 286 149 64 chr17 41088247 41088635 -44349845 - L1M3b LINE L1 -5776 1073 653 342 250 6 61 chr17 41089325 41089489 -44348991 + L1MC/D LINE L1 5254 5408 -2400 315 301 0 12 chr17 41089510 41089593 -44348887 - L2 LINE L2 0 3313 3232 269 322 16 118 chr17 41089647 41089902 -44348578 + L1MC/D LINE L1 5496 5724 -2084 244 264 58 0 chr17 41089903 41089990 -44348490 + L1MC4 LINE L1 7773 7864 -178 201 156 0 0 chr17 41090151 41090183 -44348297 + GA-rich Low_complexity Low_complexity 4 35 0 2138 125 0 3 chr17 41091634 41091930 -44346550 + AluSx SINE Alu 1 295 -17 224 276 66 0 chr17 41091953 41092029 -44346451 - L2 LINE L2 -5 3267 3187 2624 20 3 0 chr17 41092413 41092710 -44345770 + AluY SINE Alu 1 298 -13 832 170 14 7 chr17 41093193 41093334 -44345146 + FRAM SINE Alu 5 146 -30 24 0 0 0 chr17 41093351 41093375 -44345105 + AT_rich Low_complexity Low_complexity 1 24 0 344 291 112 116 chr17 41093751 41094467 -44344013 + L1M2 LINE L1 527 1239 -5610 186 324 216 28 chr17 41094965 41095141 -44343339 - MIR SINE MIR -21 241 33 5022 69 3 1 chr17 41095316 41095968 -44342512 + L1PA8 LINE L1 5519 6171 -1 49 0 0 0 chr17 41096654 41096703 -44341777 + AT_rich Low_complexity Low_complexity 1 49 0 1263 56 0 0 chr17 41096703 41096864 -44341616 - L1PA5 LINE L1 -6 6148 5988 242 239 0 0 chr17 41097014 41097060 -44341420 - L2 LINE L2 -17 3255 3210 1000 201 40 49 chr17 41097223 41097551 -44340929 + L1M4 LINE L1 4773 5097 -1049 6364 81 3 3 chr17 41097552 41098418 -44340062 + L1PA8 LINE L1 5301 6166 -6 2975 105 2 30 chr17 41098628 41099043 -44339437 + L1PA15 LINE L1 5713 6115 -50 2300 92 3 0 chr17 41099043 41099338 -44339142 + AluSp SINE Alu 1 296 -17 2975 105 2 30 chr17 41099338 41099387 -44339093 + L1PA15 LINE L1 6115 6164 -1 182 283 75 50 chr17 41099700 41099820 -44338660 + L3 LINE CR1 1444 1566 -11 1256 120 39 19 chr17 41100259 41100467 -44338013 - L1MD1 LINE L1 0 6242 6031 22 0 0 0 chr17 41101192 41101214 -44337266 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 47 chr17 41102081 41102105 -44336375 + AT_rich Low_complexity Low_complexity 1 24 -17 4407 83 30 7 chr17 41102105 41102704 -44335776 + L1PB1 LINE L1 5535 6147 -4 28 0 0 47 chr17 41102704 41102722 -44335758 + AT_rich Low_complexity Low_complexity 24 41 0 2081 116 14 7 chr17 41102849 41103141 -44335339 + AluSx SINE Alu 5 298 -14 3968 193 105 18 chr17 41103190 41103774 -44334706 - L1MD1 LINE L1 -1 6635 6103 2299 89 13 3 chr17 41103774 41104077 -44334403 - AluSx SINE Alu -6 306 1 3968 193 105 18 chr17 41104077 41104634 -44333846 - L1MD1 LINE L1 -533 6103 5386 43836 33 21 2 chr17 41104668 41110701 -44327779 - L1PA2 LINE L1 -1 6154 2 312 265 20 20 chr17 41110731 41110829 -44327651 - L1MD1 LINE L1 -1199 5341 5244 2534 169 0 24 chr17 41110836 41111261 -44327219 - Tigger2a DNA MER2_type 0 434 20 749 276 32 0 chr17 41111263 41111484 -44326996 - L1MD1 LINE L1 -1298 5242 5015 997 214 108 62 chr17 41111506 41111894 -44326586 - L1MD1 LINE L1 -1698 4842 4437 * 2613 214 9 28 chr17 41111890 41112562 -44325918 - L1MD1 LINE L1 -2916 3624 2966 4659 216 204 27 chr17 41112580 41113177 -44325303 - L1MD1 LINE L1 -4731 1809 1319 2170 107 0 0 chr17 41113177 41113468 -44325012 - AluSc SINE Alu -18 291 1 4659 216 204 27 chr17 41113468 41114137 -44324343 - L1MD1 LINE L1 -5221 1319 769 288 0 0 0 chr17 41114137 41114169 -44324311 + (TG)n Simple_repeat Simple_repeat 1 32 0 4659 216 204 27 chr17 41114169 41114436 -44324044 - L1MD1 LINE L1 -5771 769 4 809 239 25 0 chr17 41114625 41114822 -44323658 + L1MC4 LINE L1 7841 8042 0 398 258 100 46 chr17 41114990 41115359 -44323121 + L1ME LINE L1 2921 3309 -2837 225 266 53 32 chr17 41115427 41115521 -44322959 + L1ME LINE L1 4920 5015 -1131 281 298 41 8 chr17 41115868 41115989 -44322491 - L1MEc LINE L1 -6198 198 74 2348 99 3 3 chr17 41117136 41117449 -44321031 - AluSp SINE Alu 0 313 1 2280 105 0 7 chr17 41117726 41118030 -44320450 - AluSq SINE Alu -11 302 1 180 402 12 0 chr17 41118271 41118353 -44320127 - MIR SINE MIR -90 118 36 528 157 45 60 chr17 41118862 41118907 -44319573 - L1MB3 LINE L1 -1 6182 6138 2119 136 0 3 chr17 41118907 41119209 -44319271 - AluSg SINE Alu -9 301 1 528 157 45 60 chr17 41119209 41119297 -44319183 - L1MB3 LINE L1 -45 6138 6051 23 0 0 0 chr17 41119297 41119320 -44319160 + AT_rich Low_complexity Low_complexity 1 23 0 4114 98 19 11 chr17 41119320 41119884 -44318596 - L1PA11 LINE L1 0 6174 5606 26760 112 18 75 chr17 41119884 41120044 -44318436 + L1P3 LINE L1 252 419 -6042 181 57 57 0 chr17 41120044 41120079 -44318401 + (TTG)n Simple_repeat Simple_repeat 2 38 0 26760 112 18 75 chr17 41120079 41122558 -44315922 + L1P3 LINE L1 419 3036 -3425 2217 110 0 3 chr17 41122558 41122850 -44315630 + AluSg SINE Alu 1 291 -19 26760 112 18 75 chr17 41122850 41123158 -44315322 + L1P3 LINE L1 3036 3360 -3101 1996 118 24 14 chr17 41123158 41123447 -44315033 + AluSg SINE Alu 1 292 -18 26760 112 18 75 chr17 41123447 41123709 -44314771 + L1P3 LINE L1 3360 3635 -2826 2059 110 4 4 chr17 41123709 41124086 -44314394 + AluY SINE Alu 1 377 0 26760 112 18 75 chr17 41124086 41126330 -44312150 + L1P3 LINE L1 3635 5399 -1062 7033 57 6 1 chr17 41126330 41127160 -44311320 + L1PA7 LINE L1 5308 6141 -13 782 194 30 0 chr17 41127167 41127301 -44311179 + Tigger3(Golem) DNA MER2_type 2892 3029 0 459 0 0 0 chr17 41127479 41127530 -44310950 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 258 272 125 15 chr17 41127569 41127705 -44310775 + L1ME LINE L1 5297 5447 -715 329 225 0 14 chr17 41127787 41127858 -44310622 + L1ME LINE L1 5589 5658 -512 529 286 80 32 chr17 41128859 41128990 -44309490 + L1M4 LINE L1 3727 3850 -2296 1820 147 4 0 chr17 41128990 41129255 -44309225 + AluSx SINE Alu 35 300 -12 529 286 80 32 chr17 41129255 41129560 -44308920 + L1M4 LINE L1 3850 4184 -1962 290 272 22 22 chr17 41129674 41129766 -44308714 - MER81 DNA DNA -6 108 17 1090 203 88 19 chr17 41132698 41132959 -44305521 + L1MA9 LINE L1 6034 6312 0 239 264 54 81 chr17 41133035 41133103 -44305377 - MIR SINE MIR -10 252 184 2400 87 0 0 chr17 41133103 41133402 -44305078 - AluY SINE Alu -12 299 1 239 264 54 81 chr17 41133402 41133481 -44304999 - MIR SINE MIR -78 184 109 841 262 106 11 chr17 41133490 41133765 -44304715 - LTR16C LTR ERVL 0 491 191 202 269 19 0 chr17 41133983 41134035 -44304445 + GA-rich Low_complexity Low_complexity 3 55 0 809 116 22 33 chr17 41134049 41134230 -44304250 + GA-rich Low_complexity Low_complexity 2 180 0 651 238 176 84 chr17 41134529 41134886 -44303594 + MLT1B LTR MaLR 1 390 0 1178 176 88 19 chr17 41138490 41138751 -44299729 + L1MA9 LINE L1 6034 6312 0 215 342 70 0 chr17 41138848 41138962 -44299518 - MIR SINE MIR -24 238 117 724 299 104 0 chr17 41138976 41139244 -44299236 - LTR16C LTR ERVL -1 490 195 217 169 0 56 chr17 41139466 41139555 -44298925 + GA-rich Low_complexity Low_complexity 2 85 0 861 148 0 22 chr17 41139570 41139753 -44298727 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 339 194 37 22 chr17 41139753 41139887 -44298593 + GA-rich Low_complexity Low_complexity 2 137 0 539 271 59 51 chr17 41140183 41140534 -44297946 + MLT1C LTR MaLR 57 467 0 41567 66 11 0 chr17 41143731 41149821 -44288659 + L1PA5 LINE L1 1 6154 0 1199 172 88 19 chr17 41150169 41150430 -44288050 + L1MA9 LINE L1 6034 6312 0 257 318 71 0 chr17 41150527 41150653 -44287827 - MIR SINE MIR -24 238 104 679 307 100 0 chr17 41150658 41150928 -44287552 - LTR16C LTR ERVL 0 491 195 462 194 18 24 chr17 41151154 41151319 -44287161 + GA-rich Low_complexity Low_complexity 2 165 0 718 150 23 23 chr17 41151341 41151514 -44286966 + GA-rich Low_complexity Low_complexity 3 175 0 216 88 0 29 chr17 41151514 41151548 -44286932 + (GGAAA)n Simple_repeat Simple_repeat 2 34 0 505 270 59 51 chr17 41151845 41152196 -44286284 + MLT1C LTR MaLR 57 467 0 336 314 106 53 chr17 41152355 41152619 -44285861 + L1ME3A LINE L1 5888 6165 -5 364 302 125 75 chr17 41153510 41153950 -44284530 + L1M2 LINE L1 513 974 -5875 1044 180 88 19 chr17 41155699 41155960 -44282520 + L1MA9 LINE L1 6034 6312 0 303 333 62 7 chr17 41156043 41156187 -44282293 - MIR SINE MIR -7 255 104 646 301 104 0 chr17 41156192 41156461 -44282019 - LTR16C LTR ERVL 0 491 195 238 235 14 33 chr17 41156683 41156898 -44281582 + GA-rich Low_complexity Low_complexity 1 210 0 603 253 129 81 chr17 41157192 41157564 -44280916 + MLT1B LTR MaLR 1 390 0 321 323 94 49 chr17 41157723 41157989 -44280491 + L1ME3A LINE L1 5888 6165 -5 1919 154 0 0 chr17 41158064 41158362 -44280118 + AluSg SINE Alu 1 298 -12 313 323 143 44 chr17 41159224 41159658 -44278822 + L1M2 LINE L1 491 967 -5882 188 282 127 14 chr17 41160230 41160301 -44278179 - MIR SINE MIR -59 203 125 6460 194 5 3 chr17 41160657 41162752 -44275728 - L1PA15 LINE L1 -7 6158 4061 695 192 13 0 chr17 41163509 41163738 -44274742 + L1MA9 LINE L1 6034 6312 0 11258 96 2 1 chr17 41163718 41166145 -44272335 + L1PA8 LINE L1 3735 6166 -6 233 343 55 7 chr17 41166219 41166365 -44272115 - MIR SINE MIR -3 259 107 295 306 47 16 chr17 41166367 41166619 -44271861 - LTR16C LTR ERVL 0 491 214 213 211 0 0 chr17 41166858 41166910 -44271570 + GA-rich Low_complexity Low_complexity 3 54 0 569 171 34 23 chr17 41166991 41167167 -44271313 + GA-rich Low_complexity Low_complexity 3 180 0 730 203 65 116 chr17 41167450 41167755 -44270725 + MLT1B LTR MaLR 83 372 -18 396 336 88 27 chr17 41167937 41168199 -44270281 + L1ME3A LINE L1 5888 6165 -5 486 46 0 0 chr17 41168270 41168335 -44270145 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 244 194 0 97 chr17 41168431 41168493 -44269987 - MER81 DNA DNA -55 59 4 308 300 70 91 chr17 41169181 41169411 -44269069 + L1M2 LINE L1 1026 1250 -5599 1930 126 14 17 chr17 41169715 41170009 -44268471 - AluSx SINE Alu -17 295 3 951 123 67 140 chr17 41171674 41171974 -44266506 + L1MA9 LINE L1 6034 6311 -1 320 311 54 7 chr17 41172053 41172201 -44266279 - MIR SINE MIR 0 262 108 490 333 102 0 chr17 41172215 41172479 -44266001 - LTR16C LTR ERVL -6 485 195 720 190 16 13 chr17 41172703 41173054 -44265426 + GA-rich Low_complexity Low_complexity 1 352 0 972 273 163 3 chr17 41173378 41173733 -44264747 + MLT1C LTR MaLR 56 467 0 184 309 163 41 chr17 41174148 41174271 -44264209 - MIR3 SINE MIR -18 190 53 283 294 0 55 chr17 41174273 41174382 -44264098 - MER81 DNA DNA -9 105 3 316 296 133 87 chr17 41175100 41175597 -44262883 + L1M2 LINE L1 581 1100 -5749 1045 178 72 19 chr17 41176650 41176914 -44261566 + L1MA9 LINE L1 6034 6311 -1 22 70 0 0 chr17 41176939 41176982 -44261498 + AT_rich Low_complexity Low_complexity 1 43 0 295 269 64 19 chr17 41176995 41177151 -44261329 - MIR SINE MIR 0 262 100 352 244 61 0 chr17 41177151 41177266 -44261214 - LTR16C LTR ERVL 0 491 370 645 256 43 53 chr17 41177829 41178157 -44260323 + MLT1C LTR MaLR 83 465 -2 309 274 51 128 chr17 41179528 41180036 -44258444 + L1M2 LINE L1 654 1122 -5727 1014 174 70 41 chr17 41181046 41181316 -44257164 + L1MA9 LINE L1 6034 6311 -1 32 43 0 0 chr17 41181341 41181387 -44257093 + AT_rich Low_complexity Low_complexity 1 46 0 317 282 58 13 chr17 41181400 41181556 -44256924 - MIR SINE MIR 0 262 100 512 324 91 11 chr17 41181556 41181831 -44256649 - LTR16C LTR ERVL 0 491 195 429 223 11 0 chr17 41182236 41182330 -44256150 + MLT1C LTR MaLR 83 177 -290 239 137 0 20 chr17 41182341 41182392 -44256088 + (GGAA)n Simple_repeat Simple_repeat 2 51 0 465 208 1 10 chr17 41182701 41182795 -44255685 + MLT1C LTR MaLR 83 169 -221 4352 126 20 6 chr17 41182804 41183873 -44254607 + L1MA1 LINE L1 4834 5912 -390 4512 50 4 0 chr17 41185003 41185562 -44252918 + L1PA6 LINE L1 5588 6148 -6 275 297 148 45 chr17 41185677 41185832 -44252648 - MIR SINE MIR -64 198 28 423 256 30 63 chr17 41186619 41186763 -44251717 - MIR SINE MIR -62 146 15 480 287 87 0 chr17 41186918 41187068 -44251412 - L2 LINE L2 -2 3311 3149 190 333 106 16 chr17 41187978 41188101 -44250379 + L3 LINE CR1 1374 1507 -70 21 0 0 0 chr17 41188269 41188290 -44250190 + AT_rich Low_complexity Low_complexity 1 21 0 1958 84 105 25 chr17 41190348 41190634 -44247846 - AluSc SINE Alu 0 309 1 2661 161 2 22 chr17 41191326 41191816 -44246664 - MER31A LTR ERV1 0 485 6 2063 123 7 0 chr17 41192187 41192472 -44246008 + AluSx SINE Alu 1 287 -25 30 0 0 0 chr17 41192472 41192502 -44245978 + AT_rich Low_complexity Low_complexity 1 30 0 2017 133 0 3 chr17 41192637 41192922 -44245558 + AluSx SINE Alu 3 286 -26 958 127 0 8 chr17 41193689 41193823 -44244657 + AluSq/x SINE Alu 1 133 -180 292 240 13 0 chr17 41193846 41193921 -44244559 - MER116 DNA Mariner -2 78 3 252 0 0 0 chr17 41194013 41194041 -44244439 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2061 117 43 7 chr17 41194183 41194355 -44244125 - AluSq SINE Alu -3 310 121 526 27 0 27 chr17 41194355 41194429 -44244051 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 2061 117 43 7 chr17 41194429 41194555 -44243925 - AluSq SINE Alu -192 121 1 365 323 175 16 chr17 41195361 41195618 -44242862 + L3 LINE CR1 209 506 -1071 2142 107 7 3 chr17 41195985 41196275 -44242205 + AluSq SINE Alu 3 293 -20 2134 92 3 0 chr17 41196420 41196703 -44241777 + AluY SINE Alu 23 306 -5 513 338 147 19 chr17 41196813 41197236 -44241244 + L3 LINE CR1 1074 1550 -27 2019 111 3 24 chr17 41197261 41197550 -44240930 + AluSx SINE Alu 13 295 -17 474 333 70 8 chr17 41197711 41197969 -44240511 + L2 LINE L2 561 834 -2480 531 237 130 0 chr17 41198193 41198324 -44240156 + MLT1G LTR MaLR 372 519 -71 741 242 36 50 chr17 41198324 41198605 -44239875 + MLT1G-int LTR MaLR 325 601 -770 2268 85 3 7 chr17 41198827 41199132 -44239348 + AluSg SINE Alu 1 304 -6 1508 131 0 21 chr17 41199349 41199585 -44238895 - THE1B LTR MaLR -133 231 1 302 60 71 12 chr17 41199614 41199698 -44238782 + (TA)n Simple_repeat Simple_repeat 2 90 0 1579 53 48 0 chr17 41199701 41199907 -44238573 - L1PA5 LINE L1 -14 6140 5925 1248 278 40 0 chr17 41199913 41200265 -44238215 + MLT1F1 LTR MaLR 202 567 0 27 62 0 0 chr17 41200392 41200440 -44238040 + AT_rich Low_complexity Low_complexity 1 48 0 449 336 60 28 chr17 41201544 41201976 -44236504 - L1ME2 LINE L1 -233 5931 5486 907 193 26 64 chr17 41201982 41202007 -44236473 + MER58A DNA MER1_type 1 25 -2395 4152 138 53 57 chr17 41202007 41202795 -44235685 + LTR1 LTR ERV1 1 785 0 907 193 26 64 chr17 41202795 41203002 -44235478 + MER58A DNA MER1_type 25 224 0 387 286 93 0 chr17 41203012 41203152 -44235328 - L1ME2 LINE L1 -876 5483 5331 231 324 172 21 chr17 41203455 41203600 -44234880 - MIR3 SINE MIR -33 175 9 399 209 0 0 chr17 41204163 41204268 -44234212 + (TG)n Simple_repeat Simple_repeat 1 105 0 472 223 0 9 chr17 41204672 41204784 -44233696 + LTR41 LTR ERVL 3 113 -660 980 81 0 0 chr17 41204787 41204911 -44233569 + AluSp/q SINE Alu 185 308 -5 184 328 195 16 chr17 41207240 41207368 -44231112 - MIR SINE MIR -12 250 100 351 128 0 64 chr17 41207392 41207470 -44231010 + LTR49-int LTR ERV1 1779 1851 -4480 248 323 48 32 chr17 41207493 41207617 -44230863 - MIR SINE MIR -126 136 11 248 319 7 44 chr17 41208119 41208254 -44230226 + MIR SINE MIR 6 135 -127 300 300 46 8 chr17 41209005 41209135 -44229345 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 557 274 72 13 chr17 41209140 41209385 -44229095 - L1ME3A LINE L1 -243 5927 5673 214 225 0 0 chr17 41209395 41209435 -44229045 + MIR SINE MIR 194 233 -29 315 0 0 0 chr17 41209457 41209492 -44228988 + (TG)n Simple_repeat Simple_repeat 2 36 0 2070 108 14 0 chr17 41209494 41209771 -44228709 - AluSx SINE Alu -31 281 1 1192 173 33 9 chr17 41209897 41210111 -44228369 + MER20 DNA MER1_type 1 219 0 477 331 96 50 chr17 41210684 41210986 -44227494 + L2 LINE L2 2936 3251 -21 183 129 0 0 chr17 41210994 41211025 -44227455 + (TGGA)n Simple_repeat Simple_repeat 2 32 0 211 384 50 0 chr17 41213434 41213533 -44224947 - L2 LINE L2 -45 3227 3124 2086 128 7 0 chr17 41213739 41214029 -44224451 + AluSx SINE Alu 13 304 -8 426 69 0 0 chr17 41214029 41214087 -44224393 + (GGAA)n Simple_repeat Simple_repeat 1 58 0 1256 39 6 17 chr17 41214087 41214265 -44224215 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 207 203 0 102 chr17 41214270 41214329 -44224151 - MIR SINE MIR -128 134 82 271 298 0 0 chr17 41214828 41214922 -44223558 + (TTCA)n Simple_repeat Simple_repeat 1 94 0 1918 132 46 7 chr17 41215251 41215531 -44222949 + AluSx SINE Alu 1 291 -21 437 339 86 38 chr17 41215621 41215960 -44222520 - L2 LINE L2 -353 2961 2607 571 273 281 0 chr17 41216239 41216481 -44221999 + L2 LINE L2 3004 3313 0 2560 214 55 26 chr17 41216839 41217560 -44220920 + L1ME1 LINE L1 5420 6161 -5 322 270 130 9 chr17 41217659 41217774 -44220706 + L1ME4a LINE L1 5992 6120 -1 464 289 13 53 chr17 41218291 41218443 -44220037 + MER5A DNA MER1_type 33 178 -11 725 265 11 6 chr17 41218456 41218637 -44219843 - MER5A DNA MER1_type -3 186 5 206 348 0 0 chr17 41219193 41219371 -44219109 + (CAG)n Simple_repeat Simple_repeat 3 180 0 229 214 12 24 chr17 41220262 41220346 -44218134 + GA-rich Low_complexity Low_complexity 1 83 0 248 196 18 36 chr17 41220862 41220918 -44217562 - MIR3 SINE MIR -3 205 151 301 307 0 64 chr17 41220919 41221059 -44217421 + MER5B DNA MER1_type 18 148 -30 1956 139 0 0 chr17 41221295 41221600 -44216880 - AluSx SINE Alu 0 305 1 430 188 27 71 chr17 41221748 41221860 -44216620 + MIR SINE MIR 98 204 -58 22 56 0 0 chr17 41222675 41222711 -44215769 + AT_rich Low_complexity Low_complexity 1 36 0 279 215 54 46 chr17 41222728 41222858 -44215622 + L1ME4a LINE L1 5935 6065 -56 24 53 0 0 chr17 41222882 41222920 -44215560 + AT_rich Low_complexity Low_complexity 1 38 0 909 313 55 8 chr17 41223021 41223420 -44215060 + L1MC/D LINE L1 5291 5708 -2100 6135 111 10 9 chr17 41223436 41224479 -44214001 + L1PA16 LINE L1 4595 5646 -520 2740 127 29 5 chr17 41224479 41224897 -44213583 - MSTA LTR MaLR 0 428 1 6135 111 10 9 chr17 41224897 41225410 -44213070 + L1PA16 LINE L1 5646 6157 -9 422 269 215 40 chr17 41225420 41225643 -44212837 - L1MC/D LINE L1 -2231 5577 5316 305 379 36 0 chr17 41225799 41225939 -44212541 - L1MC/D LINE L1 -1030 5116 4972 1194 130 0 93 chr17 41226022 41226238 -44212242 + AluJo SINE Alu 103 298 -14 493 326 112 5 chr17 41226522 41226709 -44211771 - MIR SINE MIR -34 228 22 540 249 62 36 chr17 41226731 41226956 -44211524 - L2 LINE L2 -358 2956 2726 645 328 63 17 chr17 41232996 41233411 -44205069 + ERVL LTR ERVL 4007 4440 -1324 618 217 11 74 chr17 41233714 41233864 -44204616 - L1MD3 LINE L1 0 7995 7858 1703 144 0 78 chr17 41233864 41234183 -44204297 + AluJo SINE Alu 1 294 -18 618 217 11 74 chr17 41234183 41234221 -44204259 - L1MD3 LINE L1 -137 7858 7819 352 260 39 19 chr17 41234280 41234384 -44204096 - L1MD3 LINE L1 -185 7810 7705 784 211 11 6 chr17 41234401 41234581 -44203899 - Tigger3(Golem) DNA MER2_type -117 2912 2732 771 188 0 0 chr17 41234581 41234698 -44203782 + FLAM_C SINE Alu 1 117 -16 424 232 0 0 chr17 41234739 41234821 -44203659 - Tigger3(Golem) DNA MER2_type -2947 82 1 870 181 7 0 chr17 41234827 41234982 -44203498 - MER2 DNA MER2_type -189 156 1 586 261 28 0 chr17 41235121 41235263 -44203217 + MIR SINE MIR 47 192 -70 197 333 0 0 chr17 41236025 41236079 -44202401 - MIR SINE MIR -173 89 36 744 237 107 3 chr17 41236082 41236395 -44202085 + L2 LINE L2 2728 3069 -244 193 224 20 20 chr17 41236847 41236896 -44201584 + MIR3 SINE MIR 14 62 -146 611 292 110 17 chr17 41237016 41237563 -44200917 - L2 LINE L2 -244 3069 2463 196 327 0 0 chr17 41237587 41237642 -44200838 + MIR SINE MIR 35 89 -173 1485 137 120 39 chr17 41238055 41238406 -44200074 - THE1C LTR MaLR 0 432 1 203 231 0 0 chr17 41239202 41239241 -44199239 + C-rich Low_complexity Low_complexity 4 42 0 394 221 11 22 chr17 41239557 41239738 -44198742 + GA-rich Low_complexity Low_complexity 2 180 0 228 228 0 0 chr17 41240250 41240307 -44198173 + (TG)n Simple_repeat Simple_repeat 2 58 0 1865 141 0 10 chr17 41240508 41240799 -44197681 - MER1A DNA MER1_type 0 529 242 184 125 25 50 chr17 41243231 41243271 -44195209 + MIR SINE MIR 106 144 -118 370 326 121 0 chr17 41243486 41243627 -44194853 + MER91A DNA MER1_type 1 158 -38 240 184 0 0 chr17 41243953 41244002 -44194478 + CT-rich Low_complexity Low_complexity 4 52 0 211 273 0 0 chr17 41244012 41244056 -44194424 + polypyrimidine Low_complexity Low_complexity 3 46 0 242 276 0 13 chr17 41244842 41244918 -44193562 + (CA)n Simple_repeat Simple_repeat 2 76 0 216 295 90 39 chr17 41245143 41245299 -44193181 - MIR SINE MIR 0 262 99 6865 67 35 3 chr17 41245631 41246501 -44191979 - MER11D LTR ERVK 0 897 1 266 306 117 17 chr17 41246884 41247235 -44191245 + L2 LINE L2 2665 3049 -223 251 265 29 0 chr17 41249055 41249123 -44189357 + (TG)n Simple_repeat Simple_repeat 1 70 0 274 276 0 0 chr17 41251684 41251742 -44186738 + MIR SINE MIR 203 260 -2 212 266 219 31 chr17 41251864 41251992 -44186488 + MIR3 SINE MIR 16 167 -41 821 154 0 54 chr17 41252636 41252785 -44185695 + FRAM SINE Alu 22 162 -14 289 318 30 23 chr17 41253481 41253613 -44184867 - L2 LINE L2 -17 3296 3164 180 0 0 0 chr17 41254696 41254716 -44183764 + (T)n Simple_repeat Simple_repeat 1 20 0 287 237 40 0 chr17 41255379 41255455 -44183025 - MIR SINE MIR -75 187 109 198 317 0 0 chr17 41256218 41256278 -44182202 - L2 LINE L2 -654 2660 2601 363 257 193 0 chr17 41257295 41257435 -44181045 - MIR3 SINE MIR -33 175 9 375 341 22 0 chr17 41258445 41258583 -44179897 - MIR3 SINE MIR -14 194 54 237 322 52 63 chr17 41258602 41258776 -44179704 + L1MEd LINE L1 1097 1268 -5679 29 84 0 0 chr17 41258776 41258847 -44179633 + AT_rich Low_complexity Low_complexity 1 71 0 546 224 43 6 chr17 41259826 41259987 -44178493 + L1MEd LINE L1 1777 1943 -5004 350 294 49 21 chr17 41260007 41260150 -44178330 + L1MEd LINE L1 17 163 -6696 2425 206 13 8 chr17 41260450 41260983 -44177497 + L1MB8 LINE L1 4546 5081 -1065 1384 181 79 8 chr17 41261009 41261352 -44177128 + L1MB8 LINE L1 5830 6184 0 689 279 50 37 chr17 41261363 41261765 -44176715 + L1MEd LINE L1 2004 2410 -4728 1722 192 42 20 chr17 41261785 41262163 -44176317 - MSTD LTR MaLR -2 394 1 1498 189 14 10 chr17 41262339 41262636 -44175844 + AluJo SINE Alu 11 308 -4 1539 151 6 95 chr17 41262683 41262932 -44175548 + AluJo SINE Alu 5 220 -92 2458 155 36 5 chr17 41262932 41263346 -44175134 - MSTA LTR MaLR 0 428 2 1539 151 6 95 chr17 41263346 41263421 -44175059 + AluJo SINE Alu 220 300 -12 235 131 33 98 chr17 41263643 41263704 -44174776 + L1M1 LINE L1 3553 3609 -3956 331 229 211 40 chr17 41263704 41263927 -44174553 + L2 LINE L2 3049 3309 -4 22 35 0 0 chr17 41263956 41263985 -44174495 + AT_rich Low_complexity Low_complexity 1 29 0 3817 155 16 74 chr17 41264141 41264827 -44173653 - MER72 LTR ERV1 0 722 84 3804 65 0 0 chr17 41264827 41265306 -44173174 - L1PA7 LINE L1 0 6154 5676 3817 155 16 74 chr17 41265306 41265386 -44173094 - MER72 LTR ERV1 -638 84 1 1892 168 3 3 chr17 41265985 41266288 -44172192 + AluJb SINE Alu 1 303 -9 273 239 18 13 chr17 41266726 41266851 -44171629 - MARNA DNA Mariner -409 177 10 226 195 0 0 chr17 41266931 41266972 -44171508 + L2 LINE L2 3257 3297 -16 252 252 113 70 chr17 41267942 41268057 -44170423 + MIR SINE MIR 56 175 -87 185 315 34 11 chr17 41269502 41269591 -44168889 + MIR3 SINE MIR 109 199 -9 282 143 0 0 chr17 41269842 41269891 -44168589 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 28 48 0 0 chr17 41270507 41270549 -44167931 + AT_rich Low_complexity Low_complexity 1 42 0 272 270 121 0 chr17 41270838 41270954 -44167526 + MIR SINE MIR 78 206 -56 2237 114 0 7 chr17 41271222 41271529 -44166951 + AluSx SINE Alu 1 305 -7 343 268 168 17 chr17 41271531 41271710 -44166770 - L3 LINE CR1 -2 1575 1370 471 189 158 0 chr17 41272055 41272150 -44166330 + MER81 DNA DNA 3 112 -2 384 283 117 0 chr17 41272305 41272450 -44166030 + L2 LINE L2 3109 3270 -2 368 320 157 5 chr17 41274304 41274501 -44163979 - MIR SINE MIR -15 247 21 1102 268 68 9 chr17 41275035 41275375 -44163105 - MARNA DNA Mariner -138 448 89 2255 93 0 44 chr17 41275438 41275759 -44162721 - AluSx SINE Alu -5 307 1 22 0 0 0 chr17 41276757 41276779 -44161701 + AT_rich Low_complexity Low_complexity 1 22 0 1897 55 0 0 chr17 41277333 41277568 -44160912 - L1PA13 LINE L1 -2 6161 5927 1344 153 40 9 chr17 41278396 41278618 -44159862 + MLT2B2 LTR ERVL 1 229 -286 1791 175 14 0 chr17 41278801 41279086 -44159394 + MLT2B1 LTR ERVL 232 520 0 2207 100 0 48 chr17 41279513 41279824 -44158656 - AluY SINE Alu -15 296 1 191 313 69 61 chr17 41280227 41280358 -44158122 + L2 LINE L2 3105 3236 -36 1917 112 14 57 chr17 41282067 41282387 -44156093 - AluSx SINE Alu 0 307 1 2196 104 7 0 chr17 41283779 41284068 -44154412 + AluSc SINE Alu 1 291 -18 266 302 20 94 chr17 41284481 41284630 -44153850 + L2 LINE L2 3117 3254 -18 2442 78 3 0 chr17 41286810 41287116 -44151364 - AluSg SINE Alu -2 308 2 834 131 0 29 chr17 41287116 41287245 -44151235 + MER58A DNA MER1_type 55 181 -43 5105 224 60 53 chr17 41287911 41289486 -44148994 - L1 LINE L1 -2851 3119 1556 2169 116 0 0 chr17 41289486 41289823 -44148657 + AluSq SINE Alu 1 337 0 5105 224 60 53 chr17 41289823 41290767 -44147713 - L1 LINE L1 -4414 1556 944 2175 138 0 0 chr17 41290767 41291072 -44147408 - AluSx SINE Alu -7 305 1 5105 224 60 53 chr17 41291072 41292023 -44146457 - L1 LINE L1 -5026 944 1 247 347 88 20 chr17 41292027 41292174 -44146306 + MIR SINE MIR 20 176 -86 209 29 0 57 chr17 41292174 41292209 -44146271 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 505 264 83 22 chr17 41292742 41292953 -44145527 - MIR SINE MIR -12 250 31 232 287 88 55 chr17 41293479 41293660 -44144820 - MIR SINE MIR -6 256 70 2290 87 3 3 chr17 41293878 41294167 -44144313 + AluSc SINE Alu 3 291 -18 260 333 18 18 chr17 41294910 41295021 -44143459 - MIR SINE MIR -113 149 39 706 203 40 40 chr17 41295023 41295200 -44143280 + MER5B DNA MER1_type 2 178 0 304 280 85 34 chr17 41295431 41295549 -44142931 - MARNA DNA Mariner -201 385 262 690 64 11 0 chr17 41295648 41295742 -44142738 + L1MB4 LINE L1 6085 6179 -1 1194 179 60 123 chr17 41295742 41296155 -44142325 - MLT1D LTR MaLR -118 387 1 252 59 0 0 chr17 41296459 41296493 -44141987 + (TA)n Simple_repeat Simple_repeat 1 34 0 186 219 124 57 chr17 41296843 41296948 -44141532 + L2 LINE L2 3198 3309 -4 282 306 74 33 chr17 41298152 41298331 -44140149 + MIR SINE MIR 23 195 -60 2249 105 3 7 chr17 41302149 41302454 -44136026 + AluSc SINE Alu 1 304 -5 207 0 0 0 chr17 41302690 41302713 -44135767 + (TA)n Simple_repeat Simple_repeat 1 23 0 2543 64 0 0 chr17 41302713 41303008 -44135472 - AluY SINE Alu -16 295 1 1739 149 0 41 chr17 41305260 41305576 -44132904 + AluSp SINE Alu 3 305 -8 875 186 17 0 chr17 41305579 41305756 -44132724 + AluJo/FRAM SINE Alu 129 308 -4 291 349 47 13 chr17 41305784 41305933 -44132547 - L2 LINE L2 -18 3254 3101 248 376 28 32 chr17 41306853 41307071 -44131409 + MIR SINE MIR 20 236 -26 1137 235 8 35 chr17 41307383 41307643 -44130837 + MIR SINE MIR 4 256 -6 316 146 0 37 chr17 41307645 41307727 -44130753 + (ATG)n Simple_repeat Simple_repeat 3 81 0 279 271 104 35 chr17 41308587 41308731 -44129749 - L3 LINE CR1 -1 1576 1423 705 194 152 6 chr17 41309099 41309264 -44129216 - MER5A DNA MER1_type 0 189 1 196 290 129 11 chr17 41312758 41312851 -44125629 - L2 LINE L2 -3 3269 3166 277 350 39 0 chr17 41313272 41313375 -44125105 + MIR SINE MIR 45 151 -57 2178 116 0 0 chr17 41314049 41314350 -44124130 + AluSx SINE Alu 1 301 -11 1191 213 0 18 chr17 41314899 41315124 -44123356 - MER58A DNA MER1_type -3 221 1 367 255 94 27 chr17 41316636 41316785 -44121695 + L1M4 LINE L1 2809 2967 -3179 299 280 60 10 chr17 41317396 41317496 -44120984 - L3 LINE CR1 -8 1569 1465 358 269 0 43 chr17 41317696 41317789 -44120691 - L2 LINE L2 0 3272 3184 200 295 246 39 chr17 41317796 41318003 -44120477 - L3 LINE CR1 -229 1348 1099 1954 86 4 0 chr17 41318519 41318775 -44119705 + AluSc SINE Alu 1 257 -52 951 173 21 31 chr17 41319033 41319224 -44119256 - MER5A DNA MER1_type 0 189 1 207 293 17 0 chr17 41319563 41319621 -44118859 - L2 LINE L2 -16 3297 3239 444 344 22 43 chr17 41319708 41319938 -44118542 - MIR SINE MIR -18 244 20 214 338 0 27 chr17 41320029 41320103 -44118377 - L2 LINE L2 -4 3309 3238 695 299 44 44 chr17 41320174 41320538 -44117942 - LTR24B LTR ERV1 -6 570 207 399 203 2 25 chr17 41320578 41320676 -44117804 - LTR24B LTR ERV1 -368 97 4 210 285 77 62 chr17 41320676 41320687 -44117793 + L2 LINE L2 3164 3173 -140 2162 109 3 0 chr17 41320687 41320998 -44117482 - AluSx SINE Alu 0 312 1 210 285 77 62 chr17 41320998 41321116 -44117364 + L2 LINE L2 3173 3295 -18 195 377 102 15 chr17 41321136 41321539 -44116941 - L2 LINE L2 -625 2689 2252 209 233 166 126 chr17 41323264 41323487 -44114993 - MIR3 SINE MIR 0 262 31 280 233 164 0 chr17 41325573 41325646 -44112834 + L2 LINE L2 3185 3269 -3 265 351 32 24 chr17 41326893 41327028 -44111452 - MIR SINE MIR -72 136 17 204 324 48 29 chr17 41327447 41327552 -44110928 - L2 LINE L2 0 3313 3207 201 74 0 0 chr17 41328972 41328999 -44109481 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 437 241 174 29 chr17 41329288 41329495 -44108985 - MIR SINE MIR -6 256 20 2149 94 7 0 chr17 41329702 41329999 -44108481 + AluSp SINE Alu 1 299 -14 1405 125 47 148 chr17 41330019 41330378 -44108102 - MER7A DNA MER2_type -5 341 21 5202 99 33 13 chr17 41331040 41331399 -44107081 - L1PB1 LINE L1 -4 6147 5797 2258 93 3 0 chr17 41331399 41331700 -44106780 - AluSq SINE Alu -11 302 1 5202 99 33 13 chr17 41331700 41332128 -44106352 - L1PB1 LINE L1 -354 5797 5344 2192 88 0 33 chr17 41333107 41333413 -44105067 - AluSg SINE Alu -14 296 1 2154 112 0 3 chr17 41334087 41334401 -44104079 - AluSq SINE Alu 0 313 1 1018 239 27 31 chr17 41334579 41334838 -44103642 + MIR SINE MIR 2 259 -3 3814 159 23 13 chr17 41334957 41335739 -44102741 + L1MB1 LINE L1 5154 5946 -222 1818 178 0 3 chr17 41335739 41336051 -44102429 + L1MB1 LINE L1 5854 6166 -2 484 302 0 31 chr17 41336098 41336193 -44102287 + L1MC/D LINE L1 5511 5601 -2207 2166 109 0 0 chr17 41336193 41336486 -44101994 - AluSc SINE Alu -12 297 5 484 302 0 31 chr17 41336486 41336549 -44101931 + L1MC/D LINE L1 5601 5664 -2144 1645 149 13 55 chr17 41336946 41337254 -44101226 + AluSx SINE Alu 1 295 -17 228 235 88 118 chr17 41337435 41337537 -44100943 + L2 LINE L2 3197 3295 -18 301 312 0 0 chr17 41338391 41338468 -44100012 + MIR SINE MIR 46 122 -140 235 333 10 58 chr17 41339790 41339950 -44098530 - MIR SINE MIR -56 206 54 693 294 265 11 chr17 41339954 41340335 -44098145 - L2 LINE L2 -1 3312 2835 205 333 67 0 chr17 41343285 41343345 -44095135 - L2 LINE L2 -70 3202 3139 197 329 4 0 chr17 41343368 41343439 -44095041 - MIR SINE MIR -76 132 79 271 330 37 9 chr17 41345331 41345440 -44093040 - L2 LINE L2 0 3272 3161 181 257 129 14 chr17 41345740 41345810 -44092670 - MIR SINE MIR -74 188 111 344 253 75 87 chr17 41348234 41348475 -44090005 + L2 LINE L2 3027 3264 -8 895 210 82 10 chr17 41348583 41348778 -44089702 + MER63A DNA MER1_type 1 209 -1 734 148 0 191 chr17 41349318 41349486 -44088994 + MER5A DNA MER1_type 1 115 -74 1931 157 0 0 chr17 41349486 41349786 -44088694 - AluJb SINE Alu -12 300 1 734 148 0 191 chr17 41349786 41349847 -44088633 + MER5A DNA MER1_type 115 186 -3 352 131 49 0 chr17 41349988 41350049 -44088431 + LTR43 LTR ERV1 405 468 -134 225 0 0 0 chr17 41350057 41350082 -44088398 + (A)n Simple_repeat Simple_repeat 1 25 0 1729 174 0 7 chr17 41350082 41350381 -44088099 + AluSx SINE Alu 1 297 -15 751 194 14 0 chr17 41350381 41350525 -44087955 + MER5B DNA MER1_type 33 178 0 314 148 37 0 chr17 41350772 41350826 -44087654 + MER46C DNA MER2_type 14 69 -269 673 228 39 102 chr17 41350936 41351180 -44087300 + L1MA9 LINE L1 6016 6241 -71 2054 131 0 16 chr17 41351180 41351494 -44086986 - AluSx SINE Alu -3 309 1 673 228 39 102 chr17 41351494 41351534 -44086946 + L1MA9 LINE L1 6241 6282 -30 936 167 6 3 chr17 41353188 41353429 -44085051 + CT-rich Low_complexity Low_complexity 1 241 0 689 225 0 0 chr17 41353367 41353553 -44084927 - FLAM_A SINE Alu -12 130 10 * 610 268 103 93 chr17 41353573 41354433 -44084047 - HAL1 LINE L1 -1244 1263 371 780 195 0 0 chr17 41354969 41355097 -44083383 + FRAM SINE Alu 16 143 -33 265 303 106 21 chr17 41355104 41355246 -44083234 + HAL1b LINE L1 509 662 -686 1708 176 0 27 chr17 41355422 41355723 -44082757 + AluJo SINE Alu 5 297 -15 2116 134 3 0 chr17 41356850 41357149 -44081331 + AluSp SINE Alu 1 300 -13 1321 114 0 0 chr17 41358670 41358845 -44079635 - AluSq SINE Alu -134 179 5 778 191 29 0 chr17 41359143 41359316 -44079164 - MER53 DNA DNA -11 178 1 255 234 22 49 chr17 41359376 41359483 -44078997 + MLT1H LTR MaLR 478 549 0 767 231 6 0 chr17 41359810 41359966 -44078514 + HERVL66 LTR ERVL 1373 1529 -1889 348 304 105 33 chr17 41360330 41360511 -44077969 + PRIMA41-int LTR ERV1 7157 7350 -406 2268 107 3 7 chr17 41361009 41361319 -44077161 - AluSq SINE Alu -4 309 1 662 300 18 0 chr17 41361905 41362128 -44076352 + PRIMA41-int LTR ERV1 6820 7046 -710 339 355 4 4 chr17 41362190 41362404 -44076076 + HERVL66 LTR ERVL 3977 4093 -236 821 230 29 29 chr17 41362474 41362678 -44075802 + HERVL66 LTR ERVL 3215 3418 0 2185 197 57 16 chr17 41362678 41363119 -44075361 + LTR32 LTR ERVL 13 471 0 446 157 0 24 chr17 41363219 41363302 -44075178 - L1PB4 LINE L1 -3 6153 6073 268 299 173 8 chr17 41363384 41363511 -44074969 + MIR3 SINE MIR 32 179 -29 339 260 179 91 chr17 41364294 41364701 -44073779 + L1M2 LINE L1 444 886 -5963 222 354 127 6 chr17 41365190 41365348 -44073132 - L2 LINE L2 0 3272 3096 529 264 75 29 chr17 41365438 41365612 -44072868 + MER5A DNA MER1_type 7 188 -1 324 161 0 0 chr17 41366360 41366422 -44072058 + (CA)n Simple_repeat Simple_repeat 1 62 0 333 299 48 34 chr17 41366674 41366821 -44071659 + MIR SINE MIR 99 247 -15 286 310 65 0 chr17 41367518 41367638 -44070842 - MIR SINE MIR -63 145 15 1877 247 43 9 chr17 41368005 41368467 -44070013 - LTR65 LTR ERV1 -26 643 166 337 295 159 80 chr17 41370094 41370609 -44067871 + L1M2 LINE L1 444 999 -5850 23 0 0 0 chr17 41370900 41370923 -44067557 + AT_rich Low_complexity Low_complexity 1 23 0 4415 102 5 41 chr17 41371760 41371887 -44066593 - L1PA15 LINE L1 -8 6157 6027 1991 144 0 0 chr17 41371887 41372172 -44066308 + AluSx SINE Alu 1 285 -27 194 0 0 37 chr17 41372172 41372199 -44066281 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 4415 102 5 41 chr17 41372199 41372705 -44065775 - L1PA15 LINE L1 -136 6029 5546 275 286 38 38 chr17 41372705 41372810 -44065670 + L2 LINE L2 3209 3313 0 585 111 0 12 chr17 41373377 41373458 -44065022 - MADE1 DNA Mariner 0 80 1 513 281 120 5 chr17 41374093 41374285 -44064195 + MIR SINE MIR 48 261 -1 336 265 167 94 chr17 41374932 41375494 -44062986 + L1M2 LINE L1 444 1105 -5744 235 282 12 35 chr17 41376036 41376121 -44062359 - MIR3 SINE MIR -2 206 124 5792 117 7 62 chr17 41376331 41378153 -44060327 + L1PA16 LINE L1 4413 6166 0 462 80 42 51 chr17 41378624 41378867 -44059613 + (TA)n Simple_repeat Simple_repeat 1 241 0 222 33 98 33 chr17 41378880 41378972 -44059508 + (TA)n Simple_repeat Simple_repeat 2 99 0 * 514 105 47 23 chr17 41378967 41379138 -44059342 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 589 120 38 25 chr17 41379165 41379406 -44059074 + (TTATA)n Simple_repeat Simple_repeat 1 244 0 9518 47 2 1 chr17 41379406 41380476 -44058004 - MER11C LTR ERVK 0 1071 1 317 191 21 64 chr17 41380478 41380572 -44057908 - L1MC4 LINE L1 -1339 6703 6614 281 115 0 19 chr17 41380615 41380667 -44057813 + (TA)n Simple_repeat Simple_repeat 1 51 0 327 195 403 39 chr17 41380683 41380837 -44057643 - MIR SINE MIR -28 234 25 267 287 56 35 chr17 41381593 41381736 -44056744 - MARNA DNA Mariner -344 242 97 1870 141 7 3 chr17 41381833 41382124 -44056356 - AluSx SINE Alu -20 292 1 353 278 183 75 chr17 41382891 41383395 -44055085 + L1M2 LINE L1 444 1001 -5848 29 28 0 0 chr17 41383672 41383708 -44054772 + AT_rich Low_complexity Low_complexity 1 36 0 6584 135 8 32 chr17 41383708 41384790 -44053690 - L1MA6 LINE L1 -10 6290 5258 8213 21 3 1 chr17 41384790 41385718 -44052762 + L1PA5 LINE L1 5222 6151 -3 6584 135 8 32 chr17 41385718 41386016 -44052464 - L1MA6 LINE L1 -1042 5258 4954 238 370 25 17 chr17 41386985 41387104 -44051376 + MIR3 SINE MIR 4 123 -85 199 299 39 13 chr17 41387370 41387447 -44051033 + MIR3 SINE MIR 121 199 -9 435 165 126 39 chr17 41390071 41390198 -44048282 + MER21A LTR ERV1 27 164 -767 2839 191 42 128 chr17 41390212 41391080 -44047400 + MER21A LTR ERV1 130 922 -9 482 325 37 6 chr17 41391128 41391291 -44047189 + MIR3 SINE MIR 14 181 -27 256 274 12 12 chr17 41391389 41391473 -44047007 - MER103 DNA DNA -31 135 52 1918 145 30 0 chr17 41391484 41391787 -44046693 + AluSx SINE Alu 1 312 0 1010 202 14 9 chr17 41392116 41392329 -44046151 + L1MB5 LINE L1 5961 6174 0 288 326 109 49 chr17 41392339 41392523 -44045957 - MER91A DNA MER1_type 0 196 2 533 207 0 0 chr17 41393107 41393218 -44045262 + L1MA7 LINE L1 5774 5884 -407 1187 105 7 11 chr17 41394307 41394572 -44043908 + (GAAA)n Simple_repeat Simple_repeat 2 265 0 655 292 47 21 chr17 41394578 41394814 -44043666 + MIR SINE MIR 11 252 -10 960 122 0 0 chr17 41396573 41396696 -44041784 + AluSg SINE Alu 1 123 -187 2041 216 26 15 chr17 41396696 41396783 -44041697 + L1M4 LINE L1 4318 4403 -1743 2048 143 0 0 chr17 41396783 41397100 -44041380 + AluSx SINE Alu 1 312 0 2041 216 26 15 chr17 41397100 41397540 -44040940 + L1M4 LINE L1 4403 4851 -1295 2048 127 32 14 chr17 41397557 41397904 -44040576 - L1MA8 LINE L1 -2 6289 5937 1008 57 0 0 chr17 41397917 41398040 -44040440 - L1PA5 LINE L1 0 6154 6032 3844 147 31 27 chr17 41398040 41398174 -44040306 - L1MA8 LINE L1 -378 5934 5802 252 59 0 0 chr17 41398174 41398208 -44040272 + (TG)n Simple_repeat Simple_repeat 2 35 0 3844 147 31 27 chr17 41398208 41399067 -44039413 - L1MA8 LINE L1 -510 5802 4930 311 32 0 129 chr17 41399114 41399176 -44039304 + L1MB3 LINE L1 6128 6181 -2 2218 102 3 14 chr17 41401554 41401848 -44036632 + AluY SINE Alu 2 292 -19 1766 128 0 49 chr17 41404232 41404498 -44033982 + AluSx SINE Alu 1 253 -59 202 333 8 17 chr17 41404717 41404834 -44033646 + GA-rich Low_complexity Low_complexity 3 118 0 380 367 92 36 chr17 41404904 41405100 -44033380 - MIR SINE MIR -31 231 25 389 262 79 0 chr17 41405204 41405330 -44033150 + LTR50 LTR ERVL 1 136 -659 * 578 266 101 4 chr17 41405328 41405593 -44032887 + LTR50 LTR ERVL 404 793 -2 4940 138 32 5 chr17 41406458 41407303 -44031177 + L1MC1 LINE L1 5466 6333 0 1137 181 28 23 chr17 41407856 41408071 -44030409 - MER8 DNA MER2_type -23 216 1 266 352 21 0 chr17 41408074 41408219 -44030261 + ERVL LTR ERVL 1566 1713 -4051 850 229 63 5 chr17 41408231 41408454 -44030026 - MLT1E1 LTR MaLR 0 654 419 698 221 11 111 chr17 41408460 41408722 -44029758 - MLT1E1 LTR MaLR -323 303 68 232 196 59 0 chr17 41408798 41408849 -44029631 - LTR50 LTR ERVL -2 793 740 2838 290 52 20 chr17 41408975 41410087 -44028393 + ERVL LTR ERVL 1999 3146 -2618 1235 101 18 0 chr17 41410089 41410257 -44028223 + AluSg/x SINE Alu 140 310 -2 961 283 64 12 chr17 41410271 41410600 -44027880 + ERVL LTR ERVL 3136 3481 -2283 321 305 163 54 chr17 41410600 41410611 -44027869 - MIR SINE MIR -13 249 241 3220 104 88 8 chr17 41410611 41411099 -44027381 + MER1A DNA MER1_type 1 527 0 321 305 163 54 chr17 41411099 41411290 -44027190 - MIR SINE MIR -21 241 25 547 261 157 24 chr17 41411445 41411782 -44026698 + LTR50 LTR ERVL 83 464 -331 1787 158 32 50 chr17 41413325 41413667 -44024813 + MER1B DNA MER1_type 1 336 -1 526 249 98 39 chr17 41413728 41413956 -44024524 + MIR SINE MIR 15 262 0 189 209 0 143 chr17 41414122 41414213 -44024267 + L2 LINE L2 2180 2257 -1057 333 287 39 8 chr17 41414859 41414988 -44023492 - MIR SINE MIR -12 250 118 220 307 37 74 chr17 41415111 41415274 -44023206 + L2 LINE L2 2871 3027 -245 223 321 0 37 chr17 41415288 41415369 -44023111 + L2 LINE L2 3186 3263 -9 964 282 4 8 chr17 41415436 41415670 -44022810 + MIR SINE MIR 9 241 -21 202 171 98 0 chr17 41416033 41416074 -44022406 + L2 LINE L2 3221 3265 -7 404 320 169 8 chr17 41417175 41417531 -44020949 + L2 LINE L2 2487 2899 -415 256 295 21 11 chr17 41417621 41417716 -44020764 + L2 LINE L2 2794 2889 -425 248 309 125 37 chr17 41417736 41417872 -44020608 + L2 LINE L2 3088 3235 -37 433 302 34 56 chr17 41417987 41418166 -44020314 + MIR SINE MIR 71 245 -17 835 224 94 31 chr17 41418578 41418801 -44019679 + MIR SINE MIR 3 239 -23 293 367 92 81 chr17 41419013 41419370 -44019110 + L2 LINE L2 2894 3254 -18 1436 77 106 0 chr17 41419827 41420035 -44018445 + MER30 DNA MER1_type 1 230 0 427 236 157 0 chr17 41420120 41420260 -44018220 - MER103 DNA DNA -3 163 2 360 321 37 0 chr17 41420507 41420616 -44017864 - L3 LINE CR1 -178 1399 1287 203 257 71 43 chr17 41421889 41421959 -44016521 - L2 LINE L2 -4 3309 3238 198 0 0 0 chr17 41422500 41422522 -44015958 + (TA)n Simple_repeat Simple_repeat 1 22 0 261 0 0 0 chr17 41422836 41422865 -44015615 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2269 141 15 32 chr17 41422868 41423279 -44015201 - L1PB3 LINE L1 -14 6140 5737 592 304 6 6 chr17 41423594 41423765 -44014715 + MIR3 SINE MIR 32 202 -6 2347 164 58 11 chr17 41423891 41424355 -44014125 + MER66B LTR ERV1 1 486 0 338 314 48 0 chr17 41424379 41424503 -44013977 - MIR SINE MIR -126 136 7 353 158 0 0 chr17 41424970 41425027 -44013453 + AluS SINE Alu 1 57 -246 635 59 12 0 chr17 41425029 41425114 -44013366 + THE1B LTR MaLR 279 364 0 2181 97 3 7 chr17 41426351 41426649 -44011831 + AluSp SINE Alu 1 297 -16 505 360 32 78 chr17 41426777 41427149 -44011331 - L2 LINE L2 -8 3264 2910 725 138 36 0 chr17 41427186 41427324 -44011156 - L1MA8 LINE L1 -98 6193 6051 3209 131 111 7 chr17 41427574 41427695 -44010785 + MER51D LTR ERV1 1 108 -549 1686 142 11 15 chr17 41427695 41427963 -44010517 + AluSq SINE Alu 1 267 -46 3209 131 111 7 chr17 41427963 41428255 -44010225 + MER51D LTR ERV1 108 368 -289 312 27 0 0 chr17 41428255 41428292 -44010188 + (CA)n Simple_repeat Simple_repeat 2 38 0 3209 131 111 7 chr17 41428292 41428472 -44010008 + MER51D LTR ERV1 368 657 0 2632 108 16 0 chr17 41428545 41428933 -44009547 - L1PA13 LINE L1 0 6163 5770 21 0 0 0 chr17 41429700 41429721 -44008759 + AT_rich Low_complexity Low_complexity 1 21 0 303 248 157 86 chr17 41430283 41430623 -44007857 + L1M2 LINE L1 1081 1590 -5578 196 191 56 0 chr17 41431865 41431954 -44006526 + (TA)n Simple_repeat Simple_repeat 1 94 0 247 344 42 115 chr17 41432225 41432722 -44005758 - L2 LINE L2 0 3272 2812 219 114 0 0 chr17 41432912 41432947 -44005533 + (TG)n Simple_repeat Simple_repeat 2 36 0 218 279 127 0 chr17 41433160 41433239 -44005241 + MIR3 SINE MIR 89 177 -31 624 287 0 0 chr17 41433630 41433752 -44004728 + L2 LINE L2 3143 3264 -8 198 0 0 0 chr17 41433961 41433983 -44004497 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 235 348 43 49 chr17 41434180 41434364 -44004116 - MIR SINE MIR -66 196 14 248 238 50 12 chr17 41434857 41434937 -44003543 + L1P LINE L1 5341 5423 -728 * 402 256 58 97 chr17 41434907 41435289 -44003191 + L1ME LINE L1 5391 5757 -364 33 25 0 0 chr17 41435367 41435407 -44003073 + AT_rich Low_complexity Low_complexity 1 40 0 327 280 258 27 chr17 41436105 41436330 -44002150 + L1M4 LINE L1 995 1271 -5578 476 276 81 33 chr17 41437806 41438028 -44000452 + L1M4 LINE L1 1656 1866 -5163 180 0 0 0 chr17 41438028 41438048 -44000432 + (CA)n Simple_repeat Simple_repeat 2 21 0 476 276 81 33 chr17 41438048 41438343 -44000137 + L1M4 LINE L1 1866 2358 -4671 931 146 10 30 chr17 41438364 41438555 -43999925 + L1MB3 LINE L1 5287 5475 -705 261 0 0 0 chr17 41438555 41438584 -43999896 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 2245 125 0 0 chr17 41438597 41438902 -43999578 + AluSx SINE Alu 1 305 -7 273 102 51 0 chr17 41438907 41438966 -43999514 + (TA)n Simple_repeat Simple_repeat 1 62 0 3228 182 10 12 chr17 41438980 41439651 -43998829 + L1MB3 LINE L1 5513 6182 -1 2976 231 67 72 chr17 41439661 41441209 -43997271 + L1M4 LINE L1 2372 3925 -2923 1064 104 20 45 chr17 41441209 41441410 -43997070 - L1MA7 LINE L1 -5 6286 6091 2976 231 67 72 chr17 41441410 41441701 -43996779 + L1M4 LINE L1 3925 4216 -2632 486 49 0 0 chr17 41441701 41441762 -43996718 + (TG)n Simple_repeat Simple_repeat 2 62 0 1843 161 7 0 chr17 41441762 41442042 -43996438 - AluSx SINE Alu -28 284 3 2976 231 67 72 chr17 41442042 41442208 -43996272 + L1M4 LINE L1 4215 4332 -2516 1764 168 44 19 chr17 41442208 41442571 -43995909 - THE1C LTR MaLR -1 374 3 2976 231 67 72 chr17 41442571 41442742 -43995738 + L1M4 LINE L1 4332 4502 -2346 916 154 35 100 chr17 41442764 41443023 -43995457 + LTR42 LTR ERVL 1 242 -253 208 357 60 35 chr17 41443119 41443320 -43995160 - L2 LINE L2 -244 3028 2777 2317 129 34 0 chr17 41443537 41443924 -43994556 - MER83 LTR ERV1 0 448 49 532 32 0 0 chr17 41443953 41444016 -43994464 - L1PA2 LINE L1 -42 6113 6051 371 91 0 0 chr17 41444016 41444071 -43994409 - MER83 LTR ERV1 -393 55 1 189 0 0 0 chr17 41444577 41444598 -43993882 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 361 349 46 7 chr17 41446491 41446643 -43991837 + MIR3 SINE MIR 20 177 -31 2221 113 0 13 chr17 41447159 41447468 -43991012 - AluSq SINE Alu -8 305 1 180 0 0 0 chr17 41447522 41447542 -43990938 + (CA)n Simple_repeat Simple_repeat 1 20 0 2231 102 0 0 chr17 41448013 41448323 -43990157 + AluSg SINE Alu 1 310 0 510 265 169 27 chr17 41448729 41448948 -43989532 - MIR SINE MIR 0 262 13 467 298 75 6 chr17 41449968 41450129 -43988351 - MIR SINE MIR -70 192 21 2021 129 3 0 chr17 41450142 41450468 -43988012 - L1MA4A LINE L1 -2 6301 5975 743 261 9 55 chr17 41450633 41450674 -43987806 - MIR SINE MIR -32 230 189 2220 75 50 0 chr17 41450674 41450956 -43987524 - AluY SINE Alu -15 296 1 743 261 9 55 chr17 41450956 41451132 -43987348 - MIR SINE MIR -73 189 23 235 271 158 0 chr17 41452475 41452608 -43985872 - L1ME4a LINE L1 -4 6117 5964 2199 121 0 3 chr17 41452738 41453045 -43985435 - AluY SINE Alu -5 306 1 6172 209 79 31 chr17 41453142 41453390 -43985090 + L1MDa LINE L1 3 238 -6302 189 0 0 0 chr17 41453390 41453411 -43985069 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6172 209 79 31 chr17 41453411 41454287 -43984193 + L1MDa LINE L1 238 1239 -5301 1119 83 45 0 chr17 41454287 41454444 -43984036 - L1MA2 LINE L1 -5 6299 6136 6172 209 79 31 chr17 41454444 41455109 -43983371 + L1MDa LINE L1 1239 1870 -4670 2144 92 28 3 chr17 41455118 41455402 -43983078 + AluSc SINE Alu 1 291 -18 201 111 0 0 chr17 41455402 41455429 -43983051 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 786 177 14 17 chr17 41455429 41455719 -43982761 + GA-rich Low_complexity Low_complexity 1 289 0 3331 181 51 19 chr17 41455719 41456522 -43981958 + L1MDa LINE L1 1859 2684 -3856 378 188 0 0 chr17 41456524 41456588 -43981892 + L1MD2 LINE L1 5688 5751 -608 621 190 9 0 chr17 41456592 41456708 -43981772 + L1MD2 LINE L1 5855 5971 -388 2414 87 0 0 chr17 41456790 41457088 -43981392 + AluSg SINE Alu 1 298 -12 33 66 0 0 chr17 41457108 41457169 -43981311 + AT_rich Low_complexity Low_complexity 1 61 0 227 254 0 30 chr17 41457516 41457583 -43980897 - MLT1I LTR MaLR -314 95 31 229 286 81 27 chr17 41458510 41458695 -43979785 - L1M4 LINE L1 -990 5156 4962 1773 227 24 78 chr17 41458756 41458810 -43979670 - L1ME2 LINE L1 -9 6155 6100 1755 177 7 7 chr17 41458810 41459109 -43979371 + AluJo SINE Alu 1 299 -13 1773 227 24 78 chr17 41459109 41459632 -43978848 - L1ME2 LINE L1 -64 6100 5609 243 0 0 0 chr17 41459640 41459667 -43978813 + (GA)n Simple_repeat Simple_repeat 2 28 0 1948 153 15 21 chr17 41459729 41460063 -43978417 + MER7A DNA MER2_type 2 331 -15 1400 249 38 56 chr17 41460137 41460638 -43977842 - L1ME2 LINE L1 -918 5228 4737 589 210 77 60 chr17 41460651 41460899 -43977581 - L1MC/D LINE L1 -2259 5549 5298 188 0 0 69 chr17 41461214 41461243 -43977237 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 364 260 14 0 chr17 41461243 41461316 -43977164 - FLAM SINE Alu -16 117 44 7253 60 6 1 chr17 41461316 41462247 -43976233 + L1PA7 LINE L1 5206 6140 -14 486 167 39 20 chr17 41462276 41462378 -43976102 + MLT1D LTR MaLR 263 366 -139 277 56 0 56 chr17 41462626 41462680 -43975800 + (TTTTA)n Simple_repeat Simple_repeat 5 55 0 1624 190 30 0 chr17 41463980 41464097 -43974383 + AluJb SINE Alu 1 113 -199 294 29 0 0 chr17 41464097 41464132 -43974348 + (CA)n Simple_repeat Simple_repeat 2 36 0 1624 190 30 0 chr17 41464132 41464309 -43974171 + AluJb SINE Alu 113 304 -8 542 224 32 24 chr17 41464622 41464747 -43973733 - L2 LINE L2 -1 3312 3187 1967 106 3 14 chr17 41464782 41464963 -43973517 - AluSc SINE Alu 0 312 134 2526 48 0 26 chr17 41464963 41465275 -43973205 - AluY SINE Alu -7 304 1 1967 106 3 14 chr17 41465275 41465408 -43973072 - AluSc SINE Alu -178 134 1 370 280 26 79 chr17 41465947 41466140 -43972340 - MIR SINE MIR -63 145 14 2310 124 33 16 chr17 41466655 41467019 -43971461 - THE1C LTR MaLR 0 375 6 596 229 78 13 chr17 41468164 41468317 -43970163 + MER103 DNA DNA 1 163 -3 199 267 163 30 chr17 41468387 41468522 -43969958 - MIR SINE MIR -20 242 90 281 307 40 30 chr17 41468547 41468648 -43969832 - MIR SINE MIR -118 144 43 406 237 11 11 chr17 41468737 41468830 -43969650 + MIR SINE MIR 61 153 -109 242 309 37 0 chr17 41468871 41468952 -43969528 - MIR3 SINE MIR -4 204 121 2324 93 0 3 chr17 41469040 41469340 -43969140 - AluSg1 SINE Alu -10 299 1 223 286 0 26 chr17 41469430 41469507 -43968973 + GA-rich Low_complexity Low_complexity 3 77 0 22 35 0 0 chr17 41470406 41470435 -43968045 + AT_rich Low_complexity Low_complexity 1 29 0 337 298 40 16 chr17 41470957 41471081 -43967399 - MIR SINE MIR -65 143 17 403 311 94 17 chr17 41472692 41472872 -43965608 + MIR SINE MIR 23 216 -46 210 347 53 21 chr17 41473329 41473424 -43965056 + MIR3 SINE MIR 4 101 -107 389 311 51 17 chr17 41474510 41474687 -43963793 + MER5A DNA MER1_type 7 189 0 508 235 9 0 chr17 41474869 41474984 -43963496 - MIR SINE MIR -65 197 82 389 108 0 15 chr17 41476379 41476444 -43962036 + (TC)n Simple_repeat Simple_repeat 2 65 0 212 130 43 0 chr17 41476568 41476614 -43961866 + A-rich Low_complexity Low_complexity 1 48 0 867 214 77 9 chr17 41477177 41477397 -43961083 + MIR SINE MIR 2 236 -26 632 295 43 9 chr17 41478034 41478235 -43960245 - MIR SINE MIR -27 235 32 2243 103 0 32 chr17 41479217 41479528 -43958952 - AluSp SINE Alu -8 305 5 21 36 0 0 chr17 41480109 41480137 -43958343 + AT_rich Low_complexity Low_complexity 1 28 0 3207 116 4 19 chr17 41480295 41480760 -43957720 + LTR22A LTR ERVK 1 458 0 1479 219 52 93 chr17 41480832 41481142 -43957338 - MLT1D LTR MaLR -10 495 213 2177 81 0 81 chr17 41481142 41481346 -43957134 - AluSg SINE Alu -13 297 127 201 74 0 0 chr17 41481346 41481373 -43957107 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2177 81 0 81 chr17 41481373 41481491 -43956989 - AluSg SINE Alu -183 127 1 1479 219 52 93 chr17 41481491 41481696 -43956784 - MLT1D LTR MaLR -292 213 1 590 238 224 5 chr17 41481956 41482170 -43956310 - MIR SINE MIR 0 262 2 231 103 0 0 chr17 41482612 41482651 -43955829 + (CA)n Simple_repeat Simple_repeat 2 40 0 263 311 189 7 chr17 41482690 41482838 -43955642 - MIR SINE MIR -58 204 30 324 250 111 58 chr17 41483310 41483482 -43954998 - MIR SINE MIR -54 208 28 318 282 51 51 chr17 41483793 41483910 -43954570 + MIR SINE MIR 25 141 -67 356 373 72 4 chr17 41484258 41484537 -43953943 + L2 LINE L2 2586 2883 -431 248 229 0 0 chr17 41484526 41484574 -43953906 + L2 LINE L2 3265 3312 -1 * 1849 149 58 0 chr17 41484641 41484936 -43953544 + AluSx SINE Alu 1 312 0 831 86 17 0 chr17 41485979 41486095 -43952385 + L1PB1 LINE L1 5991 6108 -43 * 5360 88 23 30 chr17 41486088 41486883 -43951597 + L1PA10 LINE L1 5380 6168 0 266 177 16 0 chr17 41486902 41486964 -43951516 + L1PB1 LINE L1 6087 6149 -2 835 167 0 11 chr17 41487281 41487559 -43950921 + GA-rich Low_complexity Low_complexity 1 274 0 708 188 0 17 chr17 41487587 41487768 -43950712 + GA-rich Low_complexity Low_complexity 3 180 0 956 114 5 27 chr17 41487771 41487955 -43950525 + (GGA)n Simple_repeat Simple_repeat 1 180 0 203 218 18 0 chr17 41487955 41488010 -43950470 + GA-rich Low_complexity Low_complexity 3 58 0 1465 203 7 17 chr17 41488097 41488388 -43950092 + AluJo SINE Alu 1 288 -24 22 25 0 25 chr17 41488388 41488408 -43950072 + AT_rich Low_complexity Low_complexity 1 20 -19 1978 124 0 24 chr17 41488408 41488706 -43949774 - AluSq SINE Alu -22 291 1 22 25 0 25 chr17 41488706 41488725 -43949755 + AT_rich Low_complexity Low_complexity 20 39 0 319 113 99 0 chr17 41489119 41489190 -43949290 - L1P LINE L1 -821 5347 5270 420 258 171 24 chr17 41489955 41490207 -43948273 + HAL1b LINE L1 1052 1340 -8 2327 94 0 3 chr17 41490299 41490597 -43947883 + AluSg SINE Alu 1 297 -13 2402 90 0 3 chr17 41490610 41490910 -43947570 + AluSg SINE Alu 1 299 -11 215 270 261 9 chr17 41492011 41492126 -43946354 - L2 LINE L2 -186 3086 2943 202 286 76 48 chr17 41492197 41492302 -43946178 + MIR SINE MIR 104 211 -51 283 220 212 17 chr17 41492397 41492515 -43945965 + MIR3 SINE MIR 55 195 -13 185 132 0 38 chr17 41493119 41493172 -43945308 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 211 250 0 23 chr17 41495278 41495322 -43943158 - L2 LINE L2 -15 3257 3215 282 156 44 0 chr17 41495339 41495384 -43943096 + MER3 DNA MER1_type 1 47 -162 241 283 98 22 chr17 41495412 41495504 -43942976 - MIR SINE MIR -131 131 33 331 259 71 0 chr17 41495620 41495705 -43942775 - MIR SINE MIR -55 207 117 242 170 19 19 chr17 41495932 41495985 -43942495 - MIR3 SINE MIR -48 160 108 406 301 59 7 chr17 41497183 41497336 -43941144 - MIR SINE MIR -70 192 32 301 341 40 58 chr17 41497543 41497716 -43940764 - MIR3 SINE MIR -9 199 30 243 50 150 0 chr17 41498256 41498296 -43940184 - MADE1 DNA Mariner -34 46 1 2533 63 0 3 chr17 41498880 41499183 -43939297 + AluSc SINE Alu 1 302 -7 625 241 98 48 chr17 41499221 41499386 -43939094 + L1MC5 LINE L1 7518 7673 -288 2288 89 0 0 chr17 41499386 41499706 -43938774 - AluSc SINE Alu 0 320 1 625 241 98 48 chr17 41499706 41499896 -43938584 + L1MC5 LINE L1 7673 7892 -69 1700 116 0 4 chr17 41501136 41501369 -43937111 - AluSg/x SINE Alu -3 309 78 685 197 42 42 chr17 41502097 41502290 -43936190 - MIR SINE MIR -1 261 69 751 302 89 11 chr17 41502940 41503301 -43935179 - L2 LINE L2 -107 3206 2818 1099 288 205 9 chr17 41503392 41503919 -43934561 - L2 LINE L2 -1506 1808 1179 784 173 47 58 chr17 41504096 41504287 -43934193 + MER53 DNA DNA 1 189 0 337 212 16 153 chr17 41506093 41506282 -43932198 - MER103 DNA DNA -1 165 3 232 271 17 0 chr17 41506670 41506729 -43931751 - L3 LINE CR1 -362 1215 1156 2601 83 16 43 chr17 41507978 41508188 -43930292 - THE1B LTR MaLR -2 362 165 2422 91 3 0 chr17 41508188 41508495 -43929985 + AluSq SINE Alu 1 308 -5 2601 83 16 43 chr17 41508495 41508656 -43929824 - THE1B LTR MaLR -199 165 1 494 309 37 0 chr17 41508840 41509002 -43929478 - MIR3 SINE MIR -4 204 37 315 104 0 0 chr17 41509207 41509255 -43929225 + (A)n Simple_repeat Simple_repeat 1 48 0 2088 123 0 3 chr17 41509422 41509715 -43928765 - AluSx SINE Alu -20 292 1 753 201 11 69 chr17 41510954 41511052 -43927428 + MER5B DNA MER1_type 1 84 -94 2067 125 13 26 chr17 41511052 41511365 -43927115 + AluSx SINE Alu 1 309 -3 753 201 11 69 chr17 41511365 41511455 -43927025 + MER5B DNA MER1_type 84 178 0 1489 209 14 0 chr17 41511686 41511983 -43926497 + AluJo SINE Alu 1 301 -11 252 363 11 0 chr17 41512358 41512449 -43926031 - MIR3 SINE MIR -9 199 108 2048 145 0 13 chr17 41512783 41513094 -43925386 - AluJb SINE Alu -5 307 1 25 65 0 0 chr17 41513258 41513304 -43925176 + AT_rich Low_complexity Low_complexity 1 46 0 233 231 31 15 chr17 41513407 41513472 -43925008 + MLT1I LTR MaLR 70 135 -274 989 211 82 82 chr17 41513522 41513911 -43924569 + MLT1G LTR MaLR 202 590 0 496 303 45 7 chr17 41515114 41515269 -43923211 - MIR SINE MIR -54 208 48 497 291 152 0 chr17 41515979 41516130 -43922350 - MER5A DNA MER1_type 0 189 16 2537 65 0 0 chr17 41516655 41516965 -43921515 + AluY SINE Alu 1 310 -1 2174 93 0 0 chr17 41518647 41518953 -43919527 - AluSc SINE Alu 0 306 1 695 225 33 0 chr17 41520064 41520215 -43918265 + MER58B DNA MER1_type 170 325 -16 187 241 0 74 chr17 41520228 41520282 -43918198 + L3b LINE CR1 1299 1348 -235 240 143 0 24 chr17 41522263 41522305 -43916175 + MER5B DNA MER1_type 138 178 0 2474 80 0 3 chr17 41522359 41522671 -43915809 + AluY SINE Alu 1 311 0 683 163 20 20 chr17 41522688 41522927 -43915553 + GA-rich Low_complexity Low_complexity 1 239 0 4929 85 3 6 chr17 41523868 41524502 -43913978 + L1PA7 LINE L1 5519 6150 -4 261 0 0 0 chr17 41524989 41525018 -43913462 + (TG)n Simple_repeat Simple_repeat 1 29 0 193 260 154 44 chr17 41525140 41525367 -43913113 + L2 LINE L2 2695 2946 -368 250 341 67 24 chr17 41525401 41525609 -43912871 + L2 LINE L2 3020 3236 -36 195 100 0 0 chr17 41525636 41525666 -43912814 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 473 204 0 0 chr17 41525736 41525834 -43912646 - HAL1 LINE L1 -126 2381 2284 2552 52 0 10 chr17 41525836 41526146 -43912334 + AluY SINE Alu 1 307 -4 527 234 70 6 chr17 41526269 41526427 -43912053 + L2 LINE L2 3146 3313 0 783 232 39 33 chr17 41527190 41527371 -43911109 - MER5A DNA MER1_type -3 186 5 317 287 92 52 chr17 41527493 41527667 -43910813 - MER5A DNA MER1_type 0 189 9 2175 107 28 0 chr17 41528276 41528566 -43909914 - AluSg SINE Alu -12 298 1 210 178 14 41 chr17 41528600 41528673 -43909807 + (CATA)n Simple_repeat Simple_repeat 4 74 0 533 229 85 0 chr17 41528761 41528879 -43909601 - MER45A DNA AcHobo 0 178 51 1377 172 114 0 chr17 41529437 41529727 -43908753 + MER33 DNA MER1_type 1 323 -1 393 39 0 0 chr17 41529892 41529943 -43908537 + (CA)n Simple_repeat Simple_repeat 2 52 0 659 277 107 13 chr17 41530320 41530544 -43907936 - MIR SINE MIR -2 260 16 195 129 0 0 chr17 41530812 41530843 -43907637 + (TA)n Simple_repeat Simple_repeat 1 31 0 2062 132 14 0 chr17 41531282 41531570 -43906910 + AluSq SINE Alu 1 292 -21 1205 132 140 33 chr17 41531700 41532104 -43906376 - LTR45B LTR ERV1 -3 528 5 2335 103 0 0 chr17 41532291 41532591 -43905889 - AluSq SINE Alu -13 300 1 1427 178 70 28 chr17 41533713 41534000 -43904480 - AluJo SINE Alu -13 299 1 1953 149 0 0 chr17 41534810 41535132 -43903348 - AluJb SINE Alu 0 322 1 359 257 46 18 chr17 41535798 41535907 -43902573 + MIR3 SINE MIR 93 204 -4 1972 106 16 74 chr17 41536410 41536540 -43901940 + AluSx SINE Alu 3 139 -173 2329 89 0 3 chr17 41536540 41536832 -43901648 + AluSp SINE Alu 1 291 -22 1972 106 16 74 chr17 41536832 41537012 -43901468 + AluSx SINE Alu 139 295 -17 521 62 0 0 chr17 41537193 41537266 -43901214 + L1MA3 LINE L1 5821 5893 -263 534 164 77 10 chr17 41537446 41537550 -43900930 - MER81 DNA DNA -2 112 2 206 103 0 0 chr17 41537572 41537601 -43900879 - L2 LINE L2 -220 3052 3024 430 235 24 0 chr17 41538202 41538287 -43900193 + AluSc SINE Alu 2 88 -221 929 260 104 48 chr17 41538599 41538737 -43899743 - L1ME3A LINE L1 -211 5942 5813 2299 110 3 0 chr17 41538737 41539046 -43899434 - AluSq SINE Alu -3 310 1 929 260 104 48 chr17 41539046 41539984 -43898496 - L1ME3A LINE L1 -340 5813 4778 1592 80 71 0 chr17 41540053 41540265 -43898215 - L1PA11 LINE L1 -1 6173 5947 562 304 117 24 chr17 41540499 41541170 -43897310 - L1MEd LINE L1 -4614 1696 917 336 245 29 20 chr17 41541395 41541497 -43896983 - L1MC5 LINE L1 -80 7881 7779 2293 105 0 0 chr17 41542178 41542483 -43895997 + AluSc SINE Alu 1 305 -4 1871 159 3 20 chr17 41542484 41542786 -43895694 + AluJb SINE Alu 1 297 -15 214 182 15 61 chr17 41543701 41543767 -43894713 + (TTAA)n Simple_repeat Simple_repeat 1 63 0 21 0 0 0 chr17 41544723 41544744 -43893736 + AT_rich Low_complexity Low_complexity 1 21 0 333 374 147 22 chr17 41546630 41546943 -43891537 - L2 LINE L2 -1 3271 2920 2221 110 0 0 chr17 41547180 41547508 -43890972 + AluSx SINE Alu 1 312 0 293 286 60 48 chr17 41547899 41548067 -43890413 - L3 LINE CR1 -247 1330 1161 1238 151 0 0 chr17 41548142 41548327 -43890153 + AluSg/x SINE Alu 126 310 -2 1804 163 0 14 chr17 41548643 41548926 -43889554 + AluJb SINE Alu 7 285 -27 315 0 0 0 chr17 41548927 41548962 -43889518 + (CA)n Simple_repeat Simple_repeat 2 36 0 204 165 252 107 chr17 41549705 41549808 -43888672 + MIR SINE MIR 145 262 0 212 258 22 34 chr17 41550152 41550241 -43888239 + CT-rich Low_complexity Low_complexity 3 90 0 1428 119 0 0 chr17 41550638 41550832 -43887648 - L1PA13 LINE L1 -19 6144 5951 414 326 17 60 chr17 41550986 41551125 -43887355 - MLT1I LTR MaLR -129 280 153 1993 112 4 0 chr17 41551125 41551392 -43887088 + AluSx SINE Alu 37 304 -8 414 326 17 60 chr17 41551392 41551485 -43886995 - MLT1I LTR MaLR -256 153 58 2593 169 0 15 chr17 41552895 41553297 -43885183 - MSTD LTR MaLR 0 396 1 1791 147 25 0 chr17 41554616 41554902 -43883578 - L1MB7 LINE L1 0 6184 5892 1331 114 18 31 chr17 41554902 41555129 -43883351 + L1MB7 LINE L1 5689 5912 -272 497 179 66 0 chr17 41555314 41555420 -43883060 - MIR SINE MIR 0 262 150 180 305 0 73 chr17 41555491 41555573 -43882907 + L2 LINE L2 3196 3271 -1 336 207 30 96 chr17 41555669 41555804 -43882676 - MIR SINE MIR -108 154 29 473 315 32 55 chr17 41558626 41558742 -43879738 + MIR SINE MIR 43 153 -109 1644 166 3 56 chr17 41558742 41559061 -43879419 + AluJo SINE Alu 1 302 -10 473 315 32 55 chr17 41559061 41559163 -43879317 + MIR SINE MIR 153 256 -6 24 0 0 0 chr17 41559550 41559574 -43878906 + AT_rich Low_complexity Low_complexity 1 24 0 1253 102 89 31 chr17 41560681 41560906 -43877574 + L1PA16 LINE L1 5928 6165 -1 21 0 0 0 chr17 41560917 41560938 -43877542 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr17 41561969 41562012 -43876468 + AT_rich Low_complexity Low_complexity 1 43 0 193 358 30 0 chr17 41562632 41562699 -43875781 - L2 LINE L2 -4 3268 3200 2035 88 0 0 chr17 41564332 41564594 -43873886 - AluSg SINE Alu 0 310 49 219 24 24 48 chr17 41565531 41565573 -43872907 + (TG)n Simple_repeat Simple_repeat 2 42 0 1184 171 95 4 chr17 41566007 41566198 -43872282 - ORSL DNA AcHobo 0 275 54 342 0 0 0 chr17 41566198 41566236 -43872244 + (TG)n Simple_repeat Simple_repeat 2 39 0 1184 171 95 4 chr17 41566236 41566296 -43872184 - ORSL DNA AcHobo -221 54 1 23 0 0 0 chr17 41567709 41567732 -43870748 + AT_rich Low_complexity Low_complexity 1 23 0 1773 155 3 37 chr17 41567816 41568139 -43870341 + AluJo SINE Alu 1 312 0 727 154 0 24 chr17 41568969 41569092 -43869388 + FLAM_C SINE Alu 1 120 -23 295 266 212 0 chr17 41569282 41569395 -43869085 - L2 LINE L2 0 3272 3136 2241 121 0 0 chr17 41569445 41569752 -43868728 + AluSc SINE Alu 1 307 -2 664 277 84 34 chr17 41570100 41570338 -43868142 + MIR SINE MIR 13 262 0 1975 148 0 44 chr17 41570537 41570854 -43867626 + AluJb SINE Alu 1 303 -9 2211 112 0 3 chr17 41571377 41571673 -43866807 - AluSc SINE Alu -14 295 1 459 240 124 10 chr17 41571712 41571907 -43866573 + MLT1F LTR MaLR 1 229 -338 1140 212 45 2 chr17 41572162 41572490 -43865990 - MLT1A1 LTR MaLR -6 368 1 2303 84 0 0 chr17 41573065 41573373 -43865107 + AluSx SINE Alu 1 308 0 952 201 58 64 chr17 41573731 41574044 -43864436 + L1ME1 LINE L1 5849 6159 -7 235 284 81 0 chr17 41574127 41574201 -43864279 - MER63 DNA MER1_type -4 1058 979 291 120 0 20 chr17 41574205 41574255 -43864225 - MER63 DNA MER1_type -314 747 699 479 256 228 19 chr17 41574305 41574516 -43863964 + MIR SINE MIR 8 262 0 723 164 0 0 chr17 41574785 41574901 -43863579 - FRAM SINE Alu -22 154 39 2343 80 0 0 chr17 41575047 41575335 -43863145 + AluY SINE Alu 1 288 -23 2082 61 0 4 chr17 41576124 41576386 -43862094 - L1PA7 LINE L1 0 6154 5894 3382 146 6 2 chr17 41576448 41576977 -43861503 - LTR26B LTR ERV1 0 531 1 186 231 0 19 chr17 41576977 41577024 -43861456 - L2 LINE L2 -5 3308 3263 28 61 0 0 chr17 41577261 41577310 -43861170 + AT_rich Low_complexity Low_complexity 1 49 0 458 321 144 4 chr17 41578241 41578518 -43859962 + L2 LINE L2 2579 2894 -420 282 210 0 25 chr17 41578528 41578609 -43859871 - L1MA9 LINE L1 -39 6273 6195 541 279 42 107 chr17 41578612 41578995 -43859485 + L2 LINE L2 2907 3264 -8 453 208 0 0 chr17 41579067 41579144 -43859336 - AluJ/FLAM SINE Alu -235 77 1 27 49 0 0 chr17 41581381 41581422 -43857058 + AT_rich Low_complexity Low_complexity 1 41 0 620 316 191 16 chr17 41581576 41581896 -43856584 + L3 LINE CR1 1114 1489 -88 191 331 204 35 chr17 41581948 41582120 -43856360 - MIR SINE MIR -19 243 43 2509 81 0 3 chr17 41582402 41582710 -43855770 + AluSc SINE Alu 1 307 -2 378 286 57 17 chr17 41582716 41582891 -43855589 + MER117 DNA MER1_type 15 196 -1 23 33 0 0 chr17 41583092 41583122 -43855358 + AT_rich Low_complexity Low_complexity 1 30 0 2533 83 3 0 chr17 41583588 41583929 -43854551 - AluSp SINE Alu 0 342 1 198 340 80 66 chr17 41584119 41584545 -43853935 + L2 LINE L2 1803 2234 -1080 843 347 131 34 chr17 41584755 41585958 -43852522 + L2 LINE L2 1936 3252 -20 234 128 0 0 chr17 41586175 41586214 -43852266 + (TG)n Simple_repeat Simple_repeat 1 39 0 1007 71 0 2 chr17 41586214 41586425 -43852055 - AluSc SINE Alu -27 282 37 339 308 34 17 chr17 41588061 41588178 -43850302 + MIR3 SINE MIR 85 203 -5 2275 105 0 3 chr17 41588184 41588480 -43850000 - AluSx SINE Alu -17 295 1 277 367 51 0 chr17 41589156 41589254 -43849226 - L2 LINE L2 -28 3244 3142 626 224 270 39 chr17 41589341 41589421 -43849059 - LTR33 LTR ERVL -5 516 456 2336 76 3 0 chr17 41589421 41589712 -43848768 + AluSg SINE Alu 1 292 -18 626 224 270 39 chr17 41589712 41590038 -43848442 - LTR33 LTR ERVL -65 456 16 246 167 0 0 chr17 41591288 41591330 -43847150 + L2 LINE L2 3267 3308 -5 355 176 290 15 chr17 41591409 41591540 -43846940 - MIR SINE MIR -6 256 90 441 0 0 0 chr17 41591976 41592025 -43846455 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 1527 184 50 14 chr17 41592651 41592928 -43845552 - AluJb SINE Alu -24 288 2 189 0 0 0 chr17 41593151 41593172 -43845308 + (A)n Simple_repeat Simple_repeat 1 21 0 540 268 66 57 chr17 41593561 41593632 -43844848 - MIR SINE MIR -23 239 170 2209 116 10 0 chr17 41593632 41593926 -43844554 + AluSx SINE Alu 1 297 -15 540 268 66 57 chr17 41593926 41594082 -43844398 - MIR SINE MIR -92 170 10 28 61 0 0 chr17 41594476 41594525 -43843955 + AT_rich Low_complexity Low_complexity 1 49 0 755 122 72 44 chr17 41594558 41594739 -43843741 - MER53 DNA DNA -1 188 3 21 36 0 0 chr17 41594807 41594835 -43843645 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr17 41595070 41595090 -43843390 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2053 132 30 40 chr17 41596198 41596599 -43841881 - L1MA4 LINE L1 -7 6293 5897 1773 154 37 20 chr17 41597627 41597803 -43840677 - AluJb SINE Alu -8 304 119 435 38 0 0 chr17 41597803 41597856 -43840624 + (TG)n Simple_repeat Simple_repeat 2 54 0 1773 154 37 20 chr17 41597856 41597978 -43840502 - AluJb SINE Alu -193 119 1 2188 115 13 7 chr17 41598006 41598310 -43840170 + AluSp SINE Alu 1 306 -7 205 289 24 36 chr17 41598314 41598397 -43840083 + MIR SINE MIR 162 243 -19 5313 115 14 14 chr17 41599425 41600285 -43838195 - L1MA3 LINE L1 0 6305 5446 1247 92 19 67 chr17 41600325 41600429 -43838051 - L1MA3 LINE L1 -743 5403 5296 1418 151 174 8 chr17 41600429 41600688 -43837792 - AluJo SINE Alu 0 302 1 1247 92 19 67 chr17 41600688 41600915 -43837565 - L1MA3 LINE L1 -850 5296 5144 193 376 43 43 chr17 41601527 41601689 -43836791 - L2 LINE L2 -222 3050 2889 342 260 15 0 chr17 41601789 41601876 -43836604 - MIR SINE MIR -62 146 66 221 384 76 21 chr17 41602015 41602252 -43836228 - L2 LINE L2 -607 2707 2458 707 244 145 18 chr17 41602488 41602709 -43835771 - MIR SINE MIR -11 251 3 3601 47 0 0 chr17 41603369 41603812 -43834668 + L1PA6 LINE L1 5712 6154 0 2238 98 0 10 chr17 41603822 41604117 -43834363 + AluY SINE Alu 1 292 -19 1207 130 5 5 chr17 41604879 41605064 -43833416 - AluSx SINE Alu -127 185 1 339 274 0 20 chr17 41606415 41606517 -43831963 + AluJb SINE Alu 8 107 -195 389 289 21 0 chr17 41606805 41606902 -43831578 - MIR3 SINE MIR -42 166 68 180 0 0 0 chr17 41607521 41607541 -43830939 + (T)n Simple_repeat Simple_repeat 1 20 0 1412 106 0 5 chr17 41607554 41607742 -43830738 - U2 snRNA snRNA -1 187 1 1717 171 0 31 chr17 41609159 41609480 -43829000 + AluJb SINE Alu 1 311 -1 2026 207 5 0 chr17 41609480 41609872 -43828608 + MER63 DNA MER1_type 667 1060 0 977 144 0 24 chr17 41610408 41610776 -43827704 + (TGG)n Simple_repeat Simple_repeat 1 360 0 202 132 26 0 chr17 41610781 41610819 -43827661 + (ATGGTG)n Simple_repeat Simple_repeat 2 40 0 1782 154 30 10 chr17 41610923 41611291 -43827189 + LTR19A LTR ERV1 56 486 0 517 291 88 6 chr17 41611321 41611503 -43826977 + MIR SINE MIR 51 247 -15 478 322 30 20 chr17 41612258 41612457 -43826023 + MIR SINE MIR 62 262 0 256 340 41 10 chr17 41612463 41612560 -43825920 + MIR SINE MIR 136 235 -27 189 266 75 43 chr17 41613117 41613211 -43825269 + L2 LINE L2 3210 3306 -7 339 318 24 52 chr17 41613706 41613917 -43824563 + L2 LINE L2 2691 2895 -419 573 290 108 9 chr17 41614123 41614337 -43824143 + MIR SINE MIR 13 247 -15 799 230 34 0 chr17 41614535 41614713 -43823767 + MIR SINE MIR 16 199 -63 237 266 16 0 chr17 41614747 41614811 -43823669 + L2 LINE L2 3249 3313 0 331 278 11 11 chr17 41615534 41615638 -43822842 - MIR SINE MIR -82 126 22 236 269 15 15 chr17 41615772 41615839 -43822641 + L2 LINE L2 3206 3272 0 445 349 20 15 chr17 41617539 41617734 -43820746 - MIR3 SINE MIR -10 198 3 197 32 0 32 chr17 41618716 41618747 -43819733 + (CCA)n Simple_repeat Simple_repeat 1 30 0 1242 219 128 38 chr17 41619674 41619732 -43818748 - MLT1C LTR MaLR -3 464 413 2174 113 0 0 chr17 41619732 41620032 -43818448 + AluSx SINE Alu 1 300 -12 1242 219 128 38 chr17 41620032 41620394 -43818086 - MLT1C LTR MaLR -54 413 6 1788 141 41 0 chr17 41620606 41620896 -43817584 - AluJo SINE Alu -10 302 1 231 267 0 0 chr17 41621223 41621298 -43817182 + (TGG)n Simple_repeat Simple_repeat 1 75 0 204 398 0 29 chr17 41622923 41623026 -43815454 - MIR SINE MIR -65 143 44 588 234 71 10 chr17 41624184 41624381 -43814099 + L2 LINE L2 2904 3112 -201 435 274 125 47 chr17 41627252 41627573 -43810907 - HAL1 LINE L1 -1522 985 640 2295 74 0 3 chr17 41627922 41628219 -43810261 - AluY SINE Alu -15 296 1 2663 151 15 63 chr17 41628552 41628759 -43809721 + Tigger1 DNA MER2_type 1 216 -2202 2127 100 20 3 chr17 41628759 41629058 -43809422 - AluSx SINE Alu -8 304 1 2663 151 15 63 chr17 41629058 41629392 -43809088 + Tigger1 DNA MER2_type 216 516 -1902 9105 117 15 2 chr17 41629392 41630770 -43807710 + Tigger1 DNA MER2_type 1023 2418 0 486 225 17 50 chr17 41630781 41630901 -43807579 - MER5A DNA MER1_type -13 176 61 23 33 0 0 chr17 41630901 41630931 -43807549 + AT_rich Low_complexity Low_complexity 1 30 0 1481 30 0 0 chr17 41631013 41631182 -43807298 - L1PA3 LINE L1 0 6155 5987 297 0 0 0 chr17 41631182 41631220 -43807260 + L1PA3 LINE L1 5940 5977 -178 1377 57 0 23 chr17 41631220 41631397 -43807083 - L1PA8 LINE L1 -3 6169 5997 374 278 70 0 chr17 41631522 41631637 -43806843 - MIR SINE MIR -52 210 88 229 263 62 12 chr17 41633425 41633505 -43804975 + MIR SINE MIR 22 105 -103 393 276 39 0 chr17 41634021 41634148 -43804332 - MIR SINE MIR -111 151 20 289 270 149 7 chr17 41634227 41634375 -43804105 - MIR3 SINE MIR -7 201 33 396 310 82 12 chr17 41635514 41635685 -43802795 + MIR SINE MIR 8 190 -72 501 241 0 88 chr17 41637461 41637532 -43800948 + MER5B DNA MER1_type 54 109 -69 2120 108 0 7 chr17 41637532 41637829 -43800651 - AluSx SINE Alu -17 295 1 501 241 0 88 chr17 41637829 41637894 -43800586 + MER5B DNA MER1_type 109 178 0 261 241 0 0 chr17 41638009 41638075 -43800405 + MIR SINE MIR 63 129 -79 240 242 242 40 chr17 41638849 41638948 -43799532 + L2 LINE L2 3180 3298 -15 222 408 117 0 chr17 41638967 41639163 -43799317 - L2 LINE L2 -610 2704 2486 717 316 48 29 chr17 41639277 41639587 -43798893 - MER102b DNA MER1_type -14 327 12 235 329 73 13 chr17 41639893 41640127 -43798353 - L2 LINE L2 -262 3051 2804 195 42 0 0 chr17 41640151 41640175 -43798305 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 2133 72 7 10 chr17 41640177 41640468 -43798012 - L1PA8 LINE L1 -26 6146 5857 536 304 25 17 chr17 41640468 41640705 -43797775 - L2 LINE L2 -529 2785 2547 200 344 11 54 chr17 41641420 41641513 -43796967 + MIR SINE MIR 34 122 -86 242 184 20 0 chr17 41641569 41641618 -43796862 + MER103 DNA DNA 3 52 -114 301 227 58 117 chr17 41641677 41641831 -43796649 - MIR SINE MIR 0 262 118 503 252 75 0 chr17 41642467 41642643 -43795837 + MIR SINE MIR 31 222 -40 195 246 58 0 chr17 41643233 41643302 -43795178 - MIR3 SINE MIR -41 167 95 184 222 130 0 chr17 41643722 41643776 -43794704 + MIR SINE MIR 92 152 -110 2236 78 17 0 chr17 41644248 41644544 -43793936 + AluSx SINE Alu 1 301 -11 1745 108 0 4 chr17 41645420 41645669 -43792811 - AluSq SINE Alu -65 248 1 1692 207 42 88 chr17 41645670 41646246 -43792234 - L1MC4 LINE L1 -282 7760 7212 2015 111 19 91 chr17 41646430 41646792 -43791688 - MER1B DNA MER1_type 0 337 2 322 226 65 10 chr17 41647908 41648041 -43790439 - MIR3 SINE MIR -17 191 44 367 267 26 9 chr17 41648426 41648542 -43789938 + GA-rich Low_complexity Low_complexity 3 120 0 452 156 11 0 chr17 41648553 41648643 -43789837 + (TGGA)n Simple_repeat Simple_repeat 2 92 0 247 363 22 0 chr17 41648662 41648797 -43789683 + (TGGA)n Simple_repeat Simple_repeat 1 138 0 317 341 35 22 chr17 41648798 41649024 -43789456 - L2 LINE L2 -173 3099 2871 382 286 123 0 chr17 41649105 41649276 -43789204 - L2 LINE L2 -541 2773 2582 469 365 54 5 chr17 41649928 41650150 -43788330 + MIR SINE MIR 20 252 -10 228 368 133 0 chr17 41651532 41651698 -43786782 - MIR3 SINE MIR -4 204 17 1034 195 18 23 chr17 41651703 41651924 -43786556 - MER58A DNA MER1_type -4 220 1 210 143 0 0 chr17 41652157 41652192 -43786288 + (CTG)n Simple_repeat Simple_repeat 1 35 0 601 318 64 9 chr17 41652299 41652532 -43785948 - MIR SINE MIR -5 257 12 2155 120 0 16 chr17 41652708 41653024 -43785456 + AluSx SINE Alu 1 311 -1 471 306 20 41 chr17 41654209 41654394 -43784086 + MIR3 SINE MIR 16 198 -10 472 271 122 11 chr17 41654394 41654582 -43783898 + MER3 DNA MER1_type 1 209 0 2174 116 0 3 chr17 41656142 41656452 -43782028 + AluSx SINE Alu 1 309 -3 491 60 0 72 chr17 41656482 41656565 -43781915 + AluJ/FRAM SINE Alu 221 297 -15 234 219 16 0 chr17 41656661 41656725 -43781755 + MER112 DNA MER1_type 105 169 -91 2441 45 0 22 chr17 41656741 41657055 -43781425 + AluY SINE Alu 1 307 -4 225 289 190 21 chr17 41657208 41657350 -43781130 + MIR SINE MIR 85 250 -12 319 290 51 53 chr17 41659583 41659775 -43778705 - MIR SINE MIR -56 206 15 192 152 0 0 chr17 41659806 41659839 -43778641 - L2 LINE L2 -12 3301 3269 * 594 259 72 0 chr17 41659837 41660003 -43778477 - MIR SINE MIR -72 190 13 254 225 12 88 chr17 41665456 41665536 -43772944 + MIR SINE MIR 75 148 -60 475 256 27 78 chr17 41668376 41668595 -43769885 - MIR SINE MIR -34 228 21 236 287 0 0 chr17 41669594 41669681 -43768799 + (TGG)n Simple_repeat Simple_repeat 1 87 0 480 320 40 13 chr17 41670082 41670232 -43768248 - MIR3 SINE MIR -42 166 33 307 330 109 24 chr17 41670772 41670942 -43767538 - MIR3 SINE MIR -20 188 8 249 308 166 47 chr17 41671274 41671443 -43767037 + MER5A DNA MER1_type 1 189 0 839 159 8 0 chr17 41671977 41672109 -43766371 + FLAM_A SINE Alu 1 133 0 278 67 22 0 chr17 41672119 41672164 -43766316 + (GA)n Simple_repeat Simple_repeat 2 47 0 189 289 0 0 chr17 41674220 41674265 -43764215 + MIR SINE MIR 211 255 -7 180 0 0 0 chr17 41675722 41675742 -43762738 + (T)n Simple_repeat Simple_repeat 1 20 0 249 169 0 0 chr17 41676268 41676327 -43762153 + GA-rich Low_complexity Low_complexity 1 59 0 270 0 0 0 chr17 41676366 41676396 -43762084 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 485 327 25 30 chr17 41676555 41676757 -43761723 + MIR SINE MIR 30 230 -32 236 296 28 0 chr17 41676971 41677042 -43761438 - MIR SINE MIR -28 234 162 2271 105 0 0 chr17 41677049 41677354 -43761126 - AluSx SINE Alu -7 305 1 589 297 137 50 chr17 41677399 41677763 -43760717 + L2 LINE L2 2857 3252 -20 297 283 124 9 chr17 41677782 41677895 -43760585 - MIR SINE MIR -130 132 7 2161 78 0 34 chr17 41678971 41679265 -43759215 - AluY SINE Alu -14 297 14 797 264 107 3 chr17 41680104 41680432 -43758048 + MER113 DNA MER1_type? 51 420 -101 1885 147 14 14 chr17 41680432 41680745 -43757735 + AluJb SINE Alu 1 312 0 797 264 107 3 chr17 41680745 41680772 -43757708 + MER113 DNA MER1_type? 420 443 -78 1920 142 0 7 chr17 41680785 41681081 -43757399 - AluSx SINE Alu -18 294 1 205 293 200 0 chr17 41681660 41681885 -43756595 - L2 LINE L2 -445 2869 2600 487 266 35 46 chr17 41681946 41682119 -43756361 - MIR SINE MIR -79 183 13 2667 176 45 10 chr17 41683007 41683495 -43754985 + MLT1D LTR MaLR 1 505 0 470 266 110 25 chr17 41683727 41683964 -43754516 + LTR33 LTR ERVL 30 286 -235 376 206 180 4 chr17 41684814 41684977 -43753503 - MIR SINE MIR -32 230 35 233 330 85 34 chr17 41685029 41685205 -43753275 + MIR SINE MIR 4 188 -74 255 282 55 36 chr17 41685681 41685791 -43752689 + MIR3 SINE MIR 12 123 -85 228 178 22 0 chr17 41686050 41686095 -43752385 + GA-rich Low_complexity Low_complexity 2 47 0 364 323 138 18 chr17 41686493 41686710 -43751770 + MIR SINE MIR 20 262 0 319 173 0 7 chr17 41687251 41687322 -43751158 + Alu SINE Alu 1 53 -247 438 53 0 0 chr17 41687512 41687569 -43750911 + AluSq/x SINE Alu 77 133 -179 1980 134 3 13 chr17 41687572 41687877 -43750603 + AluSx SINE Alu 1 302 -10 191 339 0 0 chr17 41688296 41688361 -43750119 - MIR SINE MIR -74 134 70 222 218 18 18 chr17 41688489 41688544 -43749936 + MIR SINE MIR 98 152 -110 418 288 40 131 chr17 41689131 41689272 -43749208 + L2 LINE L2 2838 2990 -282 306 87 0 0 chr17 41689272 41689318 -43749162 + (CA)n Simple_repeat Simple_repeat 2 47 0 418 288 40 131 chr17 41689318 41689649 -43748831 + L2 LINE L2 2990 3267 -5 442 274 72 7 chr17 41690271 41690424 -43748056 + MIR SINE MIR 76 238 -24 413 314 52 48 chr17 41690409 41690638 -43747842 + L2 LINE L2 3030 3259 -13 * 315 0 0 0 chr17 41690638 41690673 -43747807 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 1691 177 6 37 chr17 41691297 41691619 -43746861 - AluJo SINE Alu 0 312 1 544 269 0 8 chr17 41691719 41691853 -43746627 + MIR SINE MIR 21 153 -109 673 265 38 63 chr17 41691861 41692099 -43746381 + MIR SINE MIR 31 262 0 529 335 123 3 chr17 41692106 41692390 -43746090 + LTR67 LTR ERVL 1 318 -239 362 236 118 35 chr17 41692431 41692575 -43745905 + LTR67 LTR ERVL 402 557 0 674 258 146 0 chr17 41692619 41692852 -43745628 + L2 LINE L2 2304 2570 -744 729 251 110 45 chr17 41693050 41693513 -43744967 + LTR1B LTR ERV1 33 525 -301 1458 101 9 0 chr17 41693751 41693968 -43744512 + AluSg/x SINE Alu 92 310 0 806 260 29 62 chr17 41694019 41694327 -43744153 + L2 LINE L2 3011 3308 -5 270 343 5 40 chr17 41695102 41695300 -43743180 + HERVL LTR ERVL 1209 1399 -4255 2272 115 0 0 chr17 41695498 41695810 -43742670 - AluSx SINE Alu 0 312 1 260 254 64 0 chr17 41695810 41695920 -43742560 - LTR67 LTR ERVL -10 547 431 443 176 29 81 chr17 41696458 41696594 -43741886 + LTR1B LTR ERV1 397 525 -301 339 386 11 5 chr17 41696594 41696778 -43741702 + HERVL LTR ERVL 1863 2047 -2949 319 345 77 47 chr17 41696801 41697244 -43741236 + LTR67 LTR ERVL 102 557 0 357 256 12 0 chr17 41697244 41697330 -43741150 + HERVL LTR ERVL 2029 2115 -3539 1730 198 28 52 chr17 41697433 41697679 -43740801 + Tigger7 DNA MER2_type 136 386 -2201 2110 112 7 0 chr17 41697679 41697975 -43740505 - AluSp SINE Alu -15 298 1 1730 198 28 52 chr17 41697975 41698318 -43740162 + Tigger7 DNA MER2_type 386 2587 0 469 325 24 37 chr17 41698325 41698571 -43739909 - LTR67 LTR ERVL -99 458 216 477 248 57 28 chr17 41698632 41698773 -43739707 - LTR67 LTR ERVL -369 188 44 2084 131 3 3 chr17 41698790 41699102 -43739378 + AluSx SINE Alu 1 312 0 465 215 19 0 chr17 41699386 41699493 -43738987 + MLT1G LTR MaLR 1 109 -486 1443 216 92 34 chr17 41699617 41700028 -43738452 - MLT1E3 LTR MaLR -189 435 1 836 248 212 16 chr17 41700028 41700472 -43738008 + MLT1G LTR MaLR 60 590 0 22 0 0 0 chr17 41700589 41700611 -43737869 + AT_rich Low_complexity Low_complexity 1 22 0 1300 210 184 13 chr17 41700689 41701156 -43737324 + MLT1H LTR MaLR 1 547 -2 1531 166 4 54 chr17 41701201 41701479 -43737001 - AluJo SINE Alu -44 268 5 420 20 0 0 chr17 41703186 41703235 -43735245 + (CA)n Simple_repeat Simple_repeat 2 50 0 191 253 217 0 chr17 41703255 41703338 -43735142 - L2 LINE L2 -36 3236 3136 194 307 0 107 chr17 41703414 41703554 -43734926 + L2 LINE L2 3147 3271 -1 232 316 0 0 chr17 41703579 41703678 -43734802 + GA-rich Low_complexity Low_complexity 1 99 0 243 336 23 38 chr17 41704844 41704975 -43733505 - L2 LINE L2 -212 3060 2932 222 247 0 0 chr17 41705107 41705184 -43733296 + (TGGA)n Simple_repeat Simple_repeat 1 77 0 332 284 0 33 chr17 41705831 41706014 -43732466 + (CCA)n Simple_repeat Simple_repeat 2 178 0 218 371 19 13 chr17 41706703 41706862 -43731618 + C-rich Low_complexity Low_complexity 2 161 0 213 402 10 0 chr17 41707305 41707402 -43731078 + L3 LINE CR1 1353 1450 -127 198 337 53 68 chr17 41707759 41707949 -43730531 - MIR3 SINE MIR -11 197 11 * 366 261 72 61 chr17 41707892 41708095 -43730385 + MIR SINE MIR 45 255 -7 507 232 27 9 chr17 41709139 41709251 -43729229 - MER81 DNA DNA 0 114 1 360 361 66 0 chr17 41709492 41709658 -43728822 - MIR SINE MIR -2 260 84 198 284 126 11 chr17 41709754 41709849 -43728631 - MIR SINE MIR -67 141 36 2307 69 0 54 chr17 41710265 41710582 -43727898 - AluY SINE Alu -11 300 1 209 200 0 19 chr17 41710582 41710635 -43727845 - MIR SINE MIR -62 146 101 200 241 92 35 chr17 41711905 41711992 -43726488 - L3 LINE CR1 -101 1476 1385 265 268 49 0 chr17 41712395 41712477 -43726003 - MIR SINE MIR -117 145 60 247 121 35 0 chr17 41712671 41712729 -43725751 + GA-rich Low_complexity Low_complexity 2 61 0 386 306 40 30 chr17 41712729 41712928 -43725552 + MIR3 SINE MIR 6 206 -2 262 282 137 48 chr17 41715314 41715438 -43723042 + MIR SINE MIR 47 181 -81 611 236 6 25 chr17 41715526 41715687 -43722793 + MIR SINE MIR 81 238 -24 455 313 77 6 chr17 41716452 41716683 -43721797 + MIR SINE MIR 5 252 -10 550 288 98 7 chr17 41717862 41718096 -43720384 - MIR SINE MIR -6 256 2 372 300 34 26 chr17 41718124 41718292 -43720188 + MIR SINE MIR 30 192 -56 486 0 0 0 chr17 41718339 41718393 -43720087 + (TTAGG)n Simple_repeat Simple_repeat 4 57 0 1107 159 41 55 chr17 41719221 41719441 -43719039 - MER20 DNA MER1_type -2 217 1 186 364 68 0 chr17 41720052 41720140 -43718340 + MIR SINE MIR 96 189 -73 2121 92 23 7 chr17 41721466 41721772 -43716708 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 41721901 41721923 -43716557 + (TTG)n Simple_repeat Simple_repeat 2 23 0 2231 116 0 0 chr17 41723633 41723935 -43714545 + AluSx SINE Alu 1 302 -10 317 292 52 10 chr17 41724808 41724904 -43713576 + MIR SINE MIR 92 191 -71 422 188 289 0 chr17 41725900 41726028 -43712452 - MIR SINE MIR -14 248 84 339 343 37 0 chr17 41726223 41726331 -43712149 + L2 LINE L2 3198 3309 -4 363 409 105 51 chr17 41727088 41727974 -43710506 - L2 LINE L2 -337 2977 2044 203 137 196 0 chr17 41729881 41729932 -43708548 + MIR3 SINE MIR 129 189 -19 1437 99 30 43 chr17 41731367 41731600 -43706880 + MER30 DNA MER1_type 1 230 0 364 299 62 14 chr17 41731650 41731794 -43706686 + MIR3 SINE MIR 46 196 -12 289 317 0 0 chr17 41732867 41733009 -43705471 + (CCA)n Simple_repeat Simple_repeat 3 144 0 210 296 74 19 chr17 41733789 41733897 -43704583 - MIR3 SINE MIR -10 198 85 * 492 284 14 7 chr17 41733891 41734032 -43704448 - MIR SINE MIR -1 261 120 541 223 89 55 chr17 41734095 41734297 -43704183 - L1ME3 LINE L1 -8 6154 5946 926 193 76 0 chr17 41734297 41734494 -43703986 + MER20 DNA MER1_type 1 212 -7 234 0 0 0 chr17 41735218 41735244 -43703236 + (TC)n Simple_repeat Simple_repeat 2 27 0 295 297 7 0 chr17 41735852 41735954 -43702526 - MIR SINE MIR -42 166 62 1795 232 111 63 chr17 41736083 41736786 -43701694 + MER21B LTR ERV1 19 755 -108 440 267 173 0 chr17 41736893 41737043 -43701437 - MIR SINE MIR 0 262 87 253 268 0 0 chr17 41737222 41737278 -43701202 - MIR3 SINE MIR -40 168 113 433 285 18 17 chr17 41737829 41737980 -43700500 + MIR SINE MIR 23 176 -32 208 361 0 14 chr17 41738010 41738082 -43700398 - MIR SINE MIR -98 164 94 203 286 286 0 chr17 41738577 41738661 -43699819 - L2 LINE L2 -1 3312 3205 303 294 18 28 chr17 41738698 41738807 -43699673 - MIR3 SINE MIR -32 176 69 279 385 15 8 chr17 41739478 41739592 -43698888 + L3b LINE CR1 1331 1448 -135 757 163 7 22 chr17 41739592 41739727 -43698753 + FLAM_A SINE Alu 1 133 0 279 385 15 8 chr17 41739727 41739742 -43698738 + L3b LINE CR1 1448 1461 -122 560 345 31 5 chr17 41739806 41740029 -43698451 + MIR SINE MIR 21 249 -13 432 299 48 30 chr17 41740813 41740980 -43697500 + MIR SINE MIR 23 192 -70 2225 75 0 0 chr17 41742468 41742770 -43695710 - AluSx SINE Alu 0 308 7 335 287 120 7 chr17 41742833 41742983 -43695497 - MIR3 SINE MIR -35 173 7 215 348 155 6 chr17 41745182 41745343 -43693137 - MIR3 SINE MIR -1 207 23 774 238 0 35 chr17 41745496 41745668 -43692812 - FRAM SINE Alu 0 166 1 286 264 0 0 chr17 41746140 41746231 -43692249 + (CCA)n Simple_repeat Simple_repeat 1 91 0 384 22 0 0 chr17 41746956 41747001 -43691479 + (TGAG)n Simple_repeat Simple_repeat 4 48 0 219 303 45 22 chr17 41747732 41747821 -43690659 + MIR SINE MIR 5 95 -167 271 281 124 0 chr17 41747821 41747910 -43690570 + MIR SINE MIR 46 145 -117 401 318 73 6 chr17 41748224 41748394 -43690086 - MIR SINE MIR -50 212 31 200 314 59 20 chr17 41749078 41749180 -43689300 + MIR SINE MIR 80 185 -77 367 364 8 8 chr17 41749253 41749385 -43689095 + MIR3 SINE MIR 12 143 -65 3147 259 89 42 chr17 41749552 41749819 -43688661 + HAL1 LINE L1 102 355 -2152 2304 91 0 0 chr17 41749819 41750116 -43688364 + AluY SINE Alu 1 297 -14 3147 259 89 42 chr17 41750116 41750790 -43687690 + HAL1 LINE L1 355 996 -1511 1869 166 0 0 chr17 41750790 41751080 -43687400 - AluJb SINE Alu -22 290 1 3147 259 89 42 chr17 41751080 41751800 -43686680 + HAL1 LINE L1 996 1842 -665 2230 128 0 0 chr17 41752246 41752558 -43685922 - AluSx SINE Alu 0 312 1 2244 107 0 3 chr17 41753680 41753990 -43684490 + AluSx SINE Alu 1 309 -3 253 212 10 10 chr17 41754143 41754242 -43684238 + (CA)n Simple_repeat Simple_repeat 1 99 0 220 336 42 42 chr17 41754348 41754467 -43684013 - MIR3 SINE MIR -49 159 41 509 361 80 4 chr17 41754768 41755006 -43683474 - MIR SINE MIR 0 262 7 327 236 9 82 chr17 41755480 41755590 -43682890 + MER5A DNA MER1_type 87 188 -1 862 141 19 0 chr17 41755858 41756014 -43682466 - LTR40a LTR ERVL 0 519 361 205 245 61 0 chr17 41756025 41756074 -43682406 + MIR SINE MIR 49 100 -162 1099 256 14 67 chr17 41756083 41756439 -43682041 - LTR40a LTR ERVL -178 341 5 712 259 61 45 chr17 41756639 41756905 -43681575 + L1MC4a LINE L1 5220 5495 -844 2180 110 0 0 chr17 41756905 41757206 -43681274 + AluY SINE Alu 1 301 -10 712 259 61 45 chr17 41757206 41757310 -43681170 + L1MC4a LINE L1 5495 5596 -743 1111 135 0 0 chr17 41757314 41757470 -43681010 + FRAM SINE Alu 1 155 -21 683 279 25 29 chr17 41757484 41757800 -43680680 + L1MC4a LINE L1 5610 5924 -1884 1551 161 67 4 chr17 41957937 41958191 -43480289 - AluSx SINE Alu -42 270 1 1409 139 0 0 chr17 41958221 41958422 -43480058 + AluSg SINE Alu 1 201 -109 341 185 0 0 chr17 41958424 41958478 -43480002 + FLAM SINE Alu 71 124 -9 2032 102 3 25 chr17 41958486 41958814 -43479666 + AluSc SINE Alu 1 322 0 2165 73 14 4 chr17 41958838 41959137 -43479343 + AluY SINE Alu 7 308 0 323 316 9 18 chr17 41959137 41959251 -43479229 - MIR SINE MIR -148 114 2 182 300 0 17 chr17 41959257 41959317 -43479163 + MIR SINE MIR 154 212 -50 419 298 9 88 chr17 41960020 41960235 -43478245 - MIR SINE MIR -50 212 15 705 253 36 101 chr17 41961252 41961640 -43476840 - L2 LINE L2 0 3272 2910 350 355 82 28 chr17 41961701 41962299 -43476181 - L2 LINE L2 -527 2787 2158 195 304 0 14 chr17 41962339 41962408 -43476072 + MIR SINE MIR 189 256 -6 1722 163 0 67 chr17 41962437 41962567 -43475913 + AluJo SINE Alu 1 138 -174 2354 68 4 0 chr17 41962567 41962877 -43475603 - AluY SINE Alu 0 311 1 1722 163 0 67 chr17 41962877 41963058 -43475422 + AluJo SINE Alu 138 292 -20 351 184 9 28 chr17 41963608 41963717 -43474763 + (TCCA)n Simple_repeat Simple_repeat 2 108 0 316 227 30 0 chr17 41963717 41963783 -43474697 - L2 LINE L2 0 3313 3246 184 310 70 14 chr17 41964053 41964124 -43474356 + MIR SINE MIR 78 152 -56 399 299 21 0 chr17 41964158 41964255 -43474225 + MER81 DNA DNA 1 99 -15 1965 123 56 7 chr17 41964489 41964773 -43473707 - AluSx SINE Alu -14 298 1 2430 87 3 0 chr17 41964781 41965079 -43473401 - AluSp SINE Alu -14 299 1 2427 62 0 7 chr17 41965351 41965643 -43472837 - AluY SINE Alu -21 290 1 710 125 0 0 chr17 41966174 41966278 -43472202 - U6 snRNA snRNA 0 107 4 180 77 0 0 chr17 41966590 41966616 -43471864 + (TG)n Simple_repeat Simple_repeat 2 27 0 1481 134 32 0 chr17 41967318 41967581 -43470899 + AluJo SINE Alu 89 358 0 724 248 79 26 chr17 41967815 41968081 -43470399 + LTR16A1 LTR ERVL 178 457 0 2311 107 0 0 chr17 41968182 41968481 -43469999 + AluSx SINE Alu 1 299 -13 1664 176 30 20 chr17 41969257 41969559 -43468921 - AluJo SINE Alu -7 305 1 1967 121 29 0 chr17 41969671 41970001 -43468479 + AluSg SINE Alu 1 338 0 1291 185 33 13 chr17 41970013 41970318 -43468162 - MER33 DNA MER1_type -22 302 1 180 74 0 0 chr17 41970637 41970664 -43467816 + L2 LINE L2 3027 3053 -219 1150 180 14 24 chr17 41970688 41970899 -43467581 + AluJb SINE Alu 104 312 0 502 243 59 0 chr17 41970952 41971088 -43467392 - MIR3 SINE MIR -7 201 58 223 186 0 34 chr17 41971415 41971474 -43467006 + C-rich Low_complexity Low_complexity 5 61 0 32 0 0 0 chr17 41972004 41972036 -43466444 + AT_rich Low_complexity Low_complexity 1 32 0 2566 75 3 0 chr17 41972039 41972345 -43466135 + AluSp SINE Alu 1 307 -6 486 300 122 8 chr17 41972478 41972715 -43465765 + L1MC4a LINE L1 5576 5839 -1969 409 273 112 54 chr17 41972773 41972952 -43465528 + L1ME4a LINE L1 5840 6034 -87 2072 157 0 0 chr17 41972952 41973257 -43465223 - AluJo SINE Alu -7 305 1 409 273 112 54 chr17 41973257 41973282 -43465198 + L1ME4a LINE L1 6034 6056 -65 256 197 15 45 chr17 41973671 41973737 -43464743 - AluJ/FRAM SINE Alu -15 287 224 2131 121 14 0 chr17 41973819 41974109 -43464371 + AluSg SINE Alu 1 294 -16 854 144 0 0 chr17 41974118 41974243 -43464237 + FLAM_C SINE Alu 1 125 -8 216 111 0 67 chr17 41974247 41974292 -43464188 + (TAAAAA)n Simple_repeat Simple_repeat 1 42 0 1279 162 9 57 chr17 41974304 41974436 -43464044 + AluJb SINE Alu 3 140 -172 2398 80 10 0 chr17 41974436 41974736 -43463744 + AluSp SINE Alu 1 303 -10 2278 79 0 24 chr17 41974738 41975076 -43463404 + AluSc SINE Alu 1 331 0 1279 162 9 57 chr17 41975076 41975166 -43463314 + AluJb SINE Alu 141 220 -92 229 128 0 43 chr17 41975166 41975213 -43463267 + Alu SINE Alu 127 171 -4 * 584 241 30 24 chr17 41975210 41975376 -43463104 - MER45C DNA AcHobo -85 868 702 451 259 18 0 chr17 41975430 41975542 -43462938 + MER81 DNA DNA 1 114 0 390 304 96 66 chr17 41976217 41976625 -43461855 + L2 LINE L2 1952 2371 -943 2151 101 31 0 chr17 41976627 41976914 -43461566 + AluSx SINE Alu 1 296 -16 932 199 0 6 chr17 41976914 41977080 -43461400 + AluJb SINE Alu 134 298 -14 252 165 114 131 chr17 41977782 41977871 -43460609 - MIR3 SINE MIR -12 196 110 2247 86 3 7 chr17 41977871 41978162 -43460318 - AluSx SINE Alu -22 290 1 252 165 114 131 chr17 41978162 41978248 -43460232 - MIR3 SINE MIR -98 110 24 366 234 117 23 chr17 41978532 41978660 -43459820 - L2 LINE L2 0 3272 3133 1153 135 6 0 chr17 41978767 41978930 -43459550 + FRAM SINE Alu 1 163 -13 2475 68 0 0 chr17 41978930 41979225 -43459255 + AluY SINE Alu 1 295 -16 448 110 55 0 chr17 41979246 41979319 -43459161 - U6 snRNA snRNA 0 107 31 593 303 54 0 chr17 41979679 41979864 -43458616 + MIR SINE MIR 52 246 -16 2189 78 4 4 chr17 41980296 41980603 -43457877 + AluSp SINE Alu 18 324 0 2327 85 0 0 chr17 41981044 41981360 -43457120 - AluSx SINE Alu 0 316 1 2179 110 7 0 chr17 41981375 41981676 -43456804 - AluSx SINE Alu -4 308 6 194 312 165 9 chr17 41981691 41981800 -43456680 + MIR SINE MIR 83 208 -54 964 83 0 0 chr17 41985099 41985231 -43453249 + FLAM_C SINE Alu 1 132 -1 1967 145 35 0 chr17 41986568 41986858 -43451622 - AluSx SINE Alu -12 300 1 237 175 149 70 chr17 41987048 41987162 -43451318 - MIR3 SINE MIR -71 137 15 701 162 15 37 chr17 41987735 41987871 -43450609 - AluSq/x SINE Alu -178 134 2 21 0 0 0 chr17 41988704 41988725 -43449755 + GC_rich Low_complexity Low_complexity 1 21 0 206 62 31 0 chr17 41989311 41989343 -43449137 + (CCCCCT)n Simple_repeat Simple_repeat 3 35 0 2534 37 7 3 chr17 41989496 41989794 -43448686 - AluY SINE Alu -11 300 2 1892 91 14 81 chr17 41990011 41990308 -43448172 - AluSq SINE Alu -36 277 1 829 225 89 40 chr17 41990988 41991290 -43447190 + LTR52 LTR ERVL 93 409 -12 329 312 19 45 chr17 41991538 41991692 -43446788 - MER5B DNA MER1_type -28 150 1 373 127 113 0 chr17 41991998 41992069 -43446411 - L1 LINE L1 -1888 4258 4180 1883 192 3 0 chr17 41992081 41992389 -43446091 - AluJb SINE Alu -2 310 2 1227 204 195 9 chr17 41992476 41992488 -43445992 - L1M1 LINE L1 -5323 2242 2234 1950 123 38 3 chr17 41992488 41992781 -43445699 - AluSp SINE Alu -10 303 1 1227 204 195 9 chr17 41992781 41993112 -43445368 - L1M1 LINE L1 -5331 2234 1835 7348 98 5 15 chr17 41993134 41994202 -43444278 - MER11C LTR ERVK -14 1057 1 2061 187 118 5 chr17 41994202 41994624 -43443856 - L1M1 LINE L1 -5710 1855 1386 2045 131 20 0 chr17 41994743 41995041 -43443439 + AluSx SINE Alu 1 304 -8 702 251 17 6 chr17 41995430 41995605 -43442875 - U2 snRNA snRNA -6 182 6 2158 98 3 3 chr17 41995929 41996216 -43442264 - AluSg SINE Alu -23 287 1 600 272 35 9 chr17 41996711 41996939 -43441541 - L2 LINE L2 -643 2671 2438 312 98 0 33 chr17 41996939 41997000 -43441480 + AluSp/q SINE Alu 240 298 -5 2241 109 0 7 chr17 41997004 41997297 -43441183 + AluSx SINE Alu 2 292 -20 650 187 251 40 chr17 41997312 41997563 -43440917 + L1MC4 LINE L1 7608 7911 -131 212 143 0 0 chr17 41997595 41997630 -43440850 + (GA)n Simple_repeat Simple_repeat 2 36 0 262 154 15 15 chr17 41997658 41997723 -43440757 + GA-rich Low_complexity Low_complexity 1 65 0 243 281 49 0 chr17 41997793 41997875 -43440605 + L1MC4 LINE L1 7957 8042 0 2161 133 0 0 chr17 41997882 41998175 -43440305 + AluSx SINE Alu 1 293 -19 2034 147 0 0 chr17 41998177 41998494 -43439986 + AluSx SINE Alu 1 317 0 1197 239 81 81 chr17 41998494 41999113 -43439367 - L2 LINE L2 -1480 1834 1216 325 171 79 0 chr17 41999201 41999277 -43439203 + Looper DNA T2_type 48 129 -1429 1221 149 0 0 chr17 41999318 41999493 -43438987 - AluSx SINE Alu -18 292 118 3913 168 62 64 chr17 41999726 42000552 -43437928 - LTR13 LTR ERVK 0 954 129 2224 87 0 21 chr17 42000552 42000838 -43437642 - AluY SINE Alu -3 308 29 3913 168 62 64 chr17 42000838 42000967 -43437513 - LTR13 LTR ERVK -825 129 1 578 243 23 37 chr17 42001148 42001362 -43437118 + LTR4 LTR ERV1 385 595 -1 814 154 0 8 chr17 42001362 42001485 -43436995 - AluSx SINE Alu -186 126 5 355 145 0 43 chr17 42001501 42001570 -43436910 + Looper DNA T2_type 149 214 -1344 1429 176 113 19 chr17 42001572 42001891 -43436589 - MER90 LTR ERV1 0 614 266 518 233 15 8 chr17 42001938 42002071 -43436409 + Looper DNA T2_type 205 338 -1220 2328 91 17 0 chr17 42002081 42002377 -43436103 + AluSg SINE Alu 1 301 -9 398 227 261 50 chr17 42002450 42002749 -43435731 - L2 LINE L2 -2401 913 552 600 100 0 0 chr17 42003058 42003138 -43435342 - LTR8 LTR ERV1 -8 683 604 1800 148 4 11 chr17 42003139 42003417 -43435063 + AluSx SINE Alu 1 276 -36 1008 225 14 9 chr17 42003817 42004035 -43434445 - MIR SINE MIR 0 262 44 528 266 0 0 chr17 42004169 42004282 -43434198 - MER81 DNA DNA 0 114 2 428 269 67 40 chr17 42004620 42004769 -43433711 - MIR SINE MIR -8 254 102 2389 106 0 3 chr17 42004844 42005155 -43433325 + AluSq SINE Alu 1 310 -3 1929 141 31 3 chr17 42005392 42005682 -43432798 - AluSx SINE Alu -14 298 1 2361 53 53 0 chr17 42006088 42006371 -43432109 - AluY SINE Alu -13 298 1 891 165 0 0 chr17 42006623 42006756 -43431724 + AluJo SINE Alu 1 133 -179 1622 171 27 31 chr17 42006890 42007183 -43431297 + AluJo SINE Alu 4 295 -17 595 112 0 10 chr17 42007194 42007292 -43431188 + AluJ/FRAM SINE Alu 216 312 0 246 360 9 9 chr17 42008316 42008427 -43430053 + MIR SINE MIR 33 143 -119 224 286 29 43 chr17 42009009 42009079 -43429401 + MIR SINE MIR 20 88 -174 879 209 0 39 chr17 42009360 42009524 -43428956 + FRAM SINE Alu 2 145 -167 2368 65 0 31 chr17 42009524 42009845 -43428635 + AluY SINE Alu 1 311 0 879 209 0 39 chr17 42009845 42009862 -43428618 + FRAM SINE Alu 145 161 -15 2363 68 3 10 chr17 42010038 42010346 -43428134 + AluY SINE Alu 1 306 -5 191 308 0 0 chr17 42011424 42011463 -43427017 + MIR SINE MIR 75 113 -95 2278 103 0 0 chr17 42011795 42012107 -43426373 - AluSx SINE Alu 0 312 1 2352 81 0 0 chr17 42012361 42012668 -43425812 - AluSg1 SINE Alu -2 307 1 523 285 75 11 chr17 42012669 42012855 -43425625 - MLT1J LTR MaLR -74 437 240 339 193 57 23 chr17 42012885 42012973 -43425507 + MLT1J LTR MaLR 52 142 -369 752 113 9 0 chr17 42013099 42013205 -43425275 + U6 snRNA snRNA 1 107 0 585 122 255 0 chr17 42013214 42013312 -43425168 + FLAM_C SINE Alu 3 125 -18 1096 180 0 40 chr17 42013397 42013625 -43424855 + MER20 DNA MER1_type 1 219 0 2105 107 7 0 chr17 42013643 42013941 -43424539 + AluSx SINE Alu 1 300 -12 586 202 17 0 chr17 42013942 42014061 -43424419 + MER5B DNA MER1_type 55 175 -3 1851 148 0 0 chr17 42014343 42014649 -43423831 - AluJb SINE Alu 0 306 1 2039 90 0 48 chr17 42015019 42015330 -43423150 + AluSq SINE Alu 1 296 -17 230 276 0 0 chr17 42016375 42016433 -43422047 + MIR3 SINE MIR 140 197 -11 1574 153 4 8 chr17 42016641 42016902 -43421578 - AluJo SINE Alu -22 290 31 16866 222 15 14 chr17 42017006 42020498 -43417982 - HERVK13 LTR ERVK -2464 5652 2046 189 0 0 0 chr17 42020498 42020519 -43417961 + (CA)n Simple_repeat Simple_repeat 1 21 0 16866 222 15 14 chr17 42020519 42020956 -43417524 - HERVK13 LTR ERVK -6070 2046 1611 32 0 0 0 chr17 42021234 42021266 -43417214 + AT_rich Low_complexity Low_complexity 1 32 0 297 148 37 0 chr17 42021511 42021592 -43416888 + (TA)n Simple_repeat Simple_repeat 2 85 0 26 30 0 0 chr17 42021997 42022030 -43416450 + AT_rich Low_complexity Low_complexity 1 33 0 2140 214 45 88 chr17 42022030 42022725 -43415755 - HERVK13 LTR ERVK -6489 1627 963 331 188 77 103 chr17 42022879 42022996 -43415484 - HERVK13 LTR ERVK -7248 868 755 3253 227 28 15 chr17 42023104 42023827 -43414653 - HERVK13 LTR ERVK -7384 732 1 7681 90 14 0 chr17 42023827 42024820 -43413660 - LTR13 LTR ERVK 0 1007 1 328 153 17 0 chr17 42024822 42024881 -43413599 - HERVK13 LTR ERVK -7337 779 720 * 3816 215 21 18 chr17 42024853 42025454 -43413026 - HERVK13 LTR ERVK -7296 820 215 2241 44 0 0 chr17 42025454 42025725 -43412755 - AluY SINE Alu 0 311 41 3816 215 21 18 chr17 42025725 42025941 -43412539 - HERVK13 LTR ERVK -7901 215 1 4850 171 55 40 chr17 42025942 42026933 -43411547 - LTR13 LTR ERVK -1 1006 1 3163 147 66 1 chr17 42027451 42027973 -43410507 - MER41C LTR ERV1 0 554 1 987 136 7 7 chr17 42027973 42028127 -43410353 - MER41C-int LTR ERV1 0 7756 7603 1850 94 3 56 chr17 42028321 42028445 -43410035 + AluSg SINE Alu 21 150 -160 2033 129 0 0 chr17 42028445 42028748 -43409732 + AluSg SINE Alu 1 303 -7 1850 94 3 56 chr17 42028748 42028939 -43409541 + AluSg SINE Alu 150 310 0 207 0 0 0 chr17 42029318 42029341 -43409139 + (A)n Simple_repeat Simple_repeat 1 23 0 1660 152 4 7 chr17 42029932 42030209 -43408271 - AluSx SINE Alu -36 276 1 4516 69 0 47 chr17 42030366 42030635 -43407845 + LTR8 LTR ERV1 1 281 -410 1984 117 0 20 chr17 42030635 42030934 -43407546 + AluSx SINE Alu 1 293 -19 4516 69 0 47 chr17 42030934 42031305 -43407175 + LTR8 LTR ERV1 281 611 -80 2071 116 0 3 chr17 42031305 42031599 -43406881 - AluSq SINE Alu -20 293 1 2141 105 0 0 chr17 42032682 42032976 -43405504 - AluSx SINE Alu -18 294 1 2117 102 0 10 chr17 42033134 42033438 -43405042 - AluSx SINE Alu -11 301 1 312 254 105 26 chr17 42033495 42033609 -43404871 - MIR SINE MIR -79 183 61 328 343 10 0 chr17 42034614 42034716 -43403764 - MIR SINE MIR -1 261 159 1892 123 0 3 chr17 42034768 42035053 -43403427 - AluJb SINE Alu -24 288 5 410 267 68 56 chr17 42035166 42035432 -43403048 - L2 LINE L2 -1713 1601 1333 207 288 15 0 chr17 42035433 42035499 -43402981 + MIR SINE MIR 78 144 -118 284 282 70 0 chr17 42035702 42035773 -43402707 - L2 LINE L2 -43 3270 3195 1729 143 44 24 chr17 42036029 42036323 -43402157 + AluSq SINE Alu 1 300 -13 377 109 18 0 chr17 42036517 42036572 -43401908 - U7 snRNA snRNA -6 57 2 27 29 0 0 chr17 42036617 42036651 -43401829 + AT_rich Low_complexity Low_complexity 1 34 0 2181 88 10 0 chr17 42036713 42037008 -43401472 + AluSg SINE Alu 1 298 -12 747 262 95 9 chr17 42037119 42037340 -43401140 + MIR SINE MIR 20 259 -3 21 57 0 0 chr17 42038114 42038149 -43400331 + AT_rich Low_complexity Low_complexity 1 35 0 364 177 0 0 chr17 42038329 42038391 -43400089 + MER91B DNA MER1_type 1 62 -128 568 283 73 57 chr17 42038392 42038469 -43400011 + MIR SINE MIR 12 86 -176 1748 164 3 3 chr17 42038469 42038767 -43399713 - AluJb SINE Alu -14 298 1 568 283 73 57 chr17 42038767 42038936 -43399544 + MIR SINE MIR 86 262 0 785 197 0 64 chr17 42039942 42040130 -43398350 + MER5B DNA MER1_type 3 178 0 28 0 0 0 chr17 42040210 42040238 -43398242 + AT_rich Low_complexity Low_complexity 1 28 0 709 135 0 0 chr17 42040474 42040578 -43397902 + U6 snRNA snRNA 2 105 -2 1334 174 40 54 chr17 42040617 42040651 -43397829 + AluJo SINE Alu 9 42 -270 2157 114 0 0 chr17 42040651 42040948 -43397532 + AluSx SINE Alu 1 297 -15 2139 95 3 3 chr17 42040948 42041242 -43397238 + AluSp SINE Alu 1 294 -19 1334 174 40 54 chr17 42041242 42041333 -43397147 + AluJo SINE Alu 41 132 -180 495 48 0 0 chr17 42041333 42041395 -43397085 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 1334 174 40 54 chr17 42041395 42041565 -43396915 + AluJo SINE Alu 132 302 -10 2594 155 21 21 chr17 42041613 42042090 -43396390 - L1MB7 LINE L1 -58 6126 5650 2098 118 0 0 chr17 42042100 42042387 -43396093 - AluSx SINE Alu -16 296 10 303 173 0 0 chr17 42042516 42042568 -43395912 - L2 LINE L2 -4 3309 3258 255 161 0 0 chr17 42042593 42042649 -43395831 - L1MA5 LINE L1 0 6300 6245 1540 157 35 31 chr17 42042650 42042937 -43395543 - AluJb SINE Alu -9 303 16 569 164 52 52 chr17 42042974 42043108 -43395372 - AluJo SINE Alu -178 134 1 679 212 0 71 chr17 42043108 42043245 -43395235 - L1MB7 LINE L1 -747 5399 5280 2148 109 0 0 chr17 42043245 42043562 -43394918 - AluSq SINE Alu 0 317 1 679 212 0 71 chr17 42043562 42043635 -43394845 - L1MB7 LINE L1 -866 5280 5203 348 283 71 18 chr17 42043680 42043793 -43394687 - L2 LINE L2 -12 3260 3142 530 87 0 0 chr17 42043834 42043903 -43394577 - FLAM SINE Alu -19 124 56 692 271 68 0 chr17 42043932 42044109 -43394371 + MIR SINE MIR 4 192 -70 208 194 48 32 chr17 42044212 42044274 -43394206 - L2 LINE L2 -229 3043 2981 202 294 0 47 chr17 42044360 42044445 -43394035 + CT-rich Low_complexity Low_complexity 5 85 0 800 225 6 28 chr17 42045160 42045292 -43393188 + MER45A DNA AcHobo 1 129 -1452 2301 88 0 0 chr17 42045292 42045587 -43392893 - AluSq SINE Alu -18 295 1 800 225 6 28 chr17 42045587 42045636 -43392844 + MER45A DNA AcHobo 129 178 0 1226 140 9 13 chr17 42045830 42046058 -43392422 + SVA Other Other 427 653 -733 392 212 0 0 chr17 42046388 42046454 -43392026 - Tigger1 DNA MER2_type 0 2418 2353 6528 71 18 55 chr17 42046454 42048176 -43390304 + SVA Other Other 344 1386 0 323 167 24 95 chr17 42048190 42048274 -43390206 + MER74A LTR ERVL 296 373 -185 380 168 0 23 chr17 42048278 42048355 -43390125 + AluSx SINE Alu 2 56 -247 2150 157 211 30 chr17 42048355 42048852 -43389628 + LTR18B LTR ERVL 1 587 -27 1460 134 0 9 chr17 42048879 42049096 -43389384 + AluSx SINE Alu 52 266 -46 427 322 121 10 chr17 42049344 42049543 -43388937 - MIR SINE MIR -8 254 34 10270 211 11 13 chr17 42049781 42051875 -43386605 - HERVK13 LTR ERVK -4555 3561 1472 1029 77 0 65 chr17 42051875 42052030 -43386450 + AluY SINE Alu 1 145 -166 327 42 0 0 chr17 42052030 42052078 -43386402 + AluSx SINE Alu 261 308 0 1647 219 65 67 chr17 42052081 42052633 -43385847 - HERVK13 LTR ERVK -6633 1483 933 505 205 15 46 chr17 42052861 42053073 -43385407 - HERVK13 LTR ERVK -7263 853 709 3247 210 51 24 chr17 42053174 42053918 -43384562 - HERVK13 LTR ERVK -7352 764 1 6154 122 42 29 chr17 42053918 42054908 -43383572 - LTR13 LTR ERVK 0 1007 5 3723 180 49 68 chr17 42054908 42055880 -43382600 - LTR13 LTR ERVK 0 954 1 1399 198 17 14 chr17 42055890 42056178 -43382302 - HERVK13 LTR ERVK 0 8116 7828 2164 78 0 3 chr17 42056323 42056607 -43381873 - AluSx SINE Alu -29 283 1 202 229 121 66 chr17 42056786 42056896 -43381584 - MIR SINE MIR -62 146 36 1148 152 0 30 chr17 42057165 42057363 -43381117 + AluJo SINE Alu 87 278 -34 286 261 120 0 chr17 42057363 42057455 -43381025 + MIR SINE MIR 51 153 -109 1657 162 50 3 chr17 42057458 42057755 -43380725 + AluJo SINE Alu 2 312 0 1767 151 21 0 chr17 42057942 42058246 -43380234 + AluSx SINE Alu 1 310 0 1591 101 121 12 chr17 42058444 42058736 -43379744 - AluSg SINE Alu 0 320 1 2230 82 13 0 chr17 42058811 42059115 -43379365 - AluY SINE Alu -3 308 1 653 267 17 17 chr17 42059482 42059658 -43378822 + MER5A DNA MER1_type 14 189 0 2398 72 3 0 chr17 42059818 42060125 -43378355 - AluSx SINE Alu -3 309 2 375 285 22 44 chr17 42060540 42060677 -43377803 - L2 LINE L2 -2 3270 3137 1612 96 5 5 chr17 42061307 42061526 -43376954 - MER41C-int LTR ERV1 -3144 4612 4394 * 11294 89 42 41 chr17 42061521 42061927 -43376553 - MER41C-int LTR ERV1 -4701 3055 2651 3027 167 46 42 chr17 42061927 42062539 -43375941 + LTR18B LTR ERVL 1 614 0 11294 89 42 41 chr17 42062539 42062896 -43375584 - MER41C-int LTR ERV1 -5105 2651 2296 2115 113 0 0 chr17 42062896 42063196 -43375284 - AluSx SINE Alu -12 300 1 11294 89 42 41 chr17 42063196 42064122 -43374358 - MER41C-int LTR ERV1 -5460 2296 1363 5763 91 88 25 chr17 42064114 42064311 -43374169 - MER41C-int LTR ERV1 -6826 930 747 * 1887 142 0 10 chr17 42064311 42064613 -43373867 - AluSx SINE Alu -13 299 1 5763 91 88 25 chr17 42064613 42065288 -43373192 - MER41C-int LTR ERV1 -7009 747 3 2694 163 112 2 chr17 42065352 42065850 -43372630 - MER41C LTR ERV1 -1 553 1 303 110 68 0 chr17 42067125 42067198 -43371282 + C-rich Low_complexity Low_complexity 4 81 0 180 0 0 0 chr17 42067317 42067337 -43371143 + (G)n Simple_repeat Simple_repeat 1 20 0 6287 212 9 9 chr17 42068215 42069973 -43368507 + HERVK13 LTR ERVK 6296 8116 0 7797 81 12 1 chr17 42069973 42070969 -43367511 + LTR13 LTR ERVK 1 1007 0 4245 201 98 38 chr17 42070986 42072029 -43366451 + HERVK13 LTR ERVK 720 1824 -6292 * 7238 197 7 5 chr17 42072023 42073167 -43365313 + HERVK13 LTR ERVK 6435 7583 -533 183 42 0 0 chr17 42073167 42073191 -43365289 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7238 197 7 5 chr17 42073191 42073397 -43365083 + HERVK13 LTR ERVK 7583 7787 -329 1405 100 9 14 chr17 42073650 42073860 -43364620 - AluSc SINE Alu -19 290 82 201 324 181 0 chr17 42073931 42074036 -43364444 + MIR SINE MIR 23 146 -116 2147 96 33 0 chr17 42074102 42074405 -43364075 + AluSq SINE Alu 1 313 0 500 161 13 1 chr17 42074623 42074721 -43363759 - L1MD3 LINE L1 -2 8040 7895 1937 93 69 10 chr17 42074738 42075028 -43363452 - AluSq SINE Alu -6 307 1 546 236 21 120 chr17 42075358 42075476 -43363004 - MER63A DNA MER1_type -1478 210 125 960 112 0 8 chr17 42075476 42075610 -43362870 + FLAM_A SINE Alu 1 133 0 546 236 21 120 chr17 42075610 42075724 -43362756 - MER63A DNA MER1_type -1563 125 1 259 209 209 0 chr17 42075740 42075831 -43362649 - MIR SINE MIR -119 143 34 2243 111 0 0 chr17 42075854 42076161 -43362319 - AluSx SINE Alu -5 307 1 2214 71 0 0 chr17 42076442 42076723 -43361757 - AluY SINE Alu -7 304 24 399 237 7 96 chr17 42077933 42078068 -43360412 + MIR SINE MIR 8 130 -132 928 167 0 0 chr17 42078081 42078225 -43360255 - Tigger7 DNA MER2_type -486 219 76 360 0 0 0 chr17 42079047 42079087 -43359393 + (TG)n Simple_repeat Simple_repeat 1 40 0 645 56 0 0 chr17 42079088 42079178 -43359302 + (GA)n Simple_repeat Simple_repeat 1 90 0 1623 153 21 14 chr17 42079922 42080225 -43358255 + AluJo SINE Alu 1 305 0 1860 116 27 17 chr17 42080232 42080525 -43357955 + AluSg SINE Alu 1 296 -14 226 310 0 14 chr17 42080526 42080597 -43357883 + MLT1L LTR MaLR 198 267 -348 272 275 14 0 chr17 42080785 42080854 -43357626 + MLT1L LTR MaLR 546 615 0 211 315 14 14 chr17 42080872 42080945 -43357535 + L2 LINE L2 2196 2268 -1046 2057 107 7 20 chr17 42081158 42081457 -43357023 - AluSc SINE Alu -14 295 1 626 290 116 69 chr17 42081545 42082010 -43356470 - MLT1L LTR MaLR -7 608 122 448 289 101 20 chr17 42082288 42082437 -43356043 + MER91A DNA MER1_type 36 196 0 1821 134 4 4 chr17 42082708 42082983 -43355497 - AluSx SINE Alu -32 280 6 367 284 52 45 chr17 42083255 42083389 -43355091 + MER5B DNA MER1_type 1 135 -43 2114 88 0 14 chr17 42083590 42083885 -43354595 - AluY SINE Alu -20 291 1 206 319 0 14 chr17 42083908 42083980 -43354500 - MIR SINE MIR -113 149 79 660 168 26 9 chr17 42084007 42084141 -43354339 + FLAM_A SINE Alu 1 136 0 304 327 20 30 chr17 42084535 42084636 -43353844 + MER5A DNA MER1_type 90 189 0 238 253 222 10 chr17 42084636 42084735 -43353745 - MER5A DNA MER1_type -14 175 56 212 149 0 43 chr17 42084793 42084840 -43353640 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 2398 56 0 7 chr17 42084866 42085172 -43353308 - AluY SINE Alu -7 304 1 2272 81 3 0 chr17 42086078 42086373 -43352107 + AluSc SINE Alu 1 296 -13 434 263 168 38 chr17 42086390 42086706 -43351774 + L1ME LINE L1 5463 5819 -302 1098 184 68 5 chr17 42086723 42086929 -43351551 + MER58A DNA MER1_type 1 219 -5 278 170 0 0 chr17 42086952 42087005 -43351475 + L1ME LINE L1 5830 5882 -239 1541 112 136 0 chr17 42087016 42087311 -43351169 + AluJb SINE Alu 1 329 0 1793 152 3 0 chr17 42087362 42087667 -43350813 + AluSx SINE Alu 1 306 0 1697 153 7 0 chr17 42087671 42087945 -43350535 + AluSx SINE Alu 5 280 -32 874 88 9 0 chr17 42089437 42089551 -43348929 + FLAM_C SINE Alu 11 125 -18 1596 188 0 22 chr17 42089564 42089883 -43348597 + AluJo SINE Alu 1 312 0 360 266 221 7 chr17 42090382 42090536 -43347944 + MIR SINE MIR 47 233 -29 1779 89 0 0 chr17 42090654 42090889 -43347591 + AluSq SINE Alu 2 236 -77 216 0 0 0 chr17 42091292 42091316 -43347164 + (A)n Simple_repeat Simple_repeat 1 24 0 2388 69 3 0 chr17 42091854 42092194 -43346286 - AluY SINE Alu 0 346 6 1906 112 3 11 chr17 42092287 42092572 -43345908 + AluSx SINE Alu 1 283 -29 685 204 0 14 chr17 42092593 42092735 -43345745 + FLAM_C SINE Alu 2 141 -2 302 130 0 11 chr17 42093853 42093907 -43344573 + Alu SINE Alu 2 41 -262 780 217 46 46 chr17 42093908 42094168 -43344312 - AluJo SINE Alu 0 302 43 2143 99 0 7 chr17 42094319 42094623 -43343857 - AluSx SINE Alu -10 302 1 302 342 72 0 chr17 42094663 42094774 -43343706 - L2 LINE L2 -38 3234 3116 1447 209 7 17 chr17 42094785 42095087 -43343393 - AluJb SINE Alu -13 299 1 599 429 35 58 chr17 42095323 42095633 -43342847 + AluSp SINE Alu 1 303 0 417 204 175 29 chr17 42095648 42095751 -43342729 + FLAM_C SINE Alu 2 119 -24 3415 89 4 8 chr17 42095752 42096225 -43342255 + L1PA10 LINE L1 5698 6168 0 183 188 146 0 chr17 42096768 42096816 -43341664 - L3 LINE CR1 -216 1361 1307 192 290 16 0 chr17 42097005 42097067 -43341413 - L3 LINE CR1 -324 1253 1191 749 125 8 33 chr17 42097919 42098039 -43340441 + FLAM_C SINE Alu 5 121 -12 946 253 0 11 chr17 42098075 42098336 -43340144 + AluJo SINE Alu 25 282 -30 1793 138 45 10 chr17 42099034 42099325 -43339155 - AluSx SINE Alu -11 301 1 588 170 52 72 chr17 42100054 42100208 -43338272 - L1MD2 LINE L1 0 6242 6093 1807 137 3 0 chr17 42100242 42100526 -43337954 - AluSx SINE Alu -20 292 8 250 244 26 39 chr17 42100587 42100665 -43337815 - MIR3 SINE MIR -6 202 126 906 100 8 0 chr17 42100737 42100857 -43337623 + FLAM_C SINE Alu 5 125 -8 1503 186 0 4 chr17 42100870 42101139 -43337341 + AluJo SINE Alu 1 268 -44 22 0 0 0 chr17 42101383 42101405 -43337075 + AT_rich Low_complexity Low_complexity 1 22 0 630 180 18 191 chr17 42101870 42102148 -43336332 - L2 LINE L2 -5 3308 3079 264 230 54 27 chr17 42102841 42102915 -43335565 - L2 LINE L2 -4 3268 3193 257 260 19 29 chr17 42102958 42103062 -43335418 + (CAGAGA)n Simple_repeat Simple_repeat 2 104 0 1891 165 55 1 chr17 42104268 42104591 -43333889 - THE1B LTR MaLR 0 364 24 259 257 139 10 chr17 42104901 42105002 -43333478 + MIR SINE MIR 59 172 -90 811 144 0 62 chr17 42105296 42105456 -43333024 - AluSg/x SINE Alu -2 310 161 1537 61 5 10 chr17 42105477 42105673 -43332807 + AluSp SINE Alu 11 205 -108 1299 247 21 0 chr17 42105673 42105964 -43332516 + LTR10B-int LTR ERV1 6352 6648 -1 244 137 98 0 chr17 42105966 42106017 -43332463 + LTR10B LTR ERV1 1 56 -491 1727 175 21 3 chr17 42106120 42106405 -43332075 + LTR10B LTR ERV1 258 547 0 381 125 0 0 chr17 42106405 42106460 -43332020 + AluSp SINE Alu 205 259 -44 1528 171 7 4 chr17 42106474 42106743 -43331737 + AluJb SINE Alu 40 309 -3 248 331 31 19 chr17 42106894 42107054 -43331426 - L1M4 LINE L1 -1162 4984 4823 2246 84 3 16 chr17 42107779 42108090 -43330390 - AluSp SINE Alu -6 307 1 1602 135 6 75 chr17 42108091 42108255 -43330225 - AluJb SINE Alu -15 297 164 2002 123 21 0 chr17 42108255 42108539 -43329941 - AluSx SINE Alu -22 290 1 1602 135 6 75 chr17 42108539 42108693 -43329787 - AluJb SINE Alu -148 164 1 469 268 191 13 chr17 42108750 42108907 -43329573 + MER5A DNA MER1_type 4 188 -1 819 191 62 0 chr17 42109262 42109424 -43329056 + AluJb SINE Alu 136 307 -5 624 156 0 0 chr17 42109426 42109535 -43328945 + GA-rich Low_complexity Low_complexity 1 109 0 1249 212 78 29 chr17 42109722 42110066 -43328414 + L1ME1 LINE L1 5647 6007 -159 762 146 99 26 chr17 42110067 42110218 -43328262 - MER34 LTR ERV1 0 542 381 880 141 0 27 chr17 42111707 42111856 -43326624 - AluJb SINE Alu -1 311 167 742 213 38 6 chr17 42111924 42112084 -43326396 - FRAM SINE Alu 0 166 2 261 276 0 26 chr17 42112138 42112214 -43326266 - L2 LINE L2 -3056 258 185 205 324 181 0 chr17 42112340 42112445 -43326035 + MIR SINE MIR 23 146 -116 2357 104 0 0 chr17 42112511 42112818 -43325662 + AluSq SINE Alu 1 307 -6 1496 64 0 5 chr17 42113099 42113287 -43325193 - U2 snRNA snRNA -1 187 1 879 103 0 0 chr17 42113458 42113574 -43324906 + AluY SINE Alu 2 117 -194 1640 65 4 69 chr17 42113574 42113651 -43324829 + AluSg/x SINE Alu 71 151 -161 2351 94 0 7 chr17 42113651 42113960 -43324520 + AluSc SINE Alu 2 308 -1 1640 65 4 69 chr17 42113960 42114153 -43324327 + AluSg/x SINE Alu 151 312 0 414 269 42 123 chr17 42114727 42115084 -43323396 + L2 LINE L2 2944 3271 -1 315 324 9 0 chr17 42115494 42115599 -43322881 - MIR SINE MIR -10 252 147 338 183 96 58 chr17 42115601 42115705 -43322775 - MER96B DNA MER1_type? 0 417 310 462 86 0 0 chr17 42115881 42115939 -43322541 - Alu SINE Alu -259 59 2 330 87 0 0 chr17 42115939 42115985 -43322495 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 2516 76 0 6 chr17 42116158 42116472 -43322008 - AluSx SINE Alu 0 312 1 302 342 72 0 chr17 42116512 42116623 -43321857 - L2 LINE L2 -38 3234 3116 1595 209 7 17 chr17 42116634 42116936 -43321544 - AluJb SINE Alu -13 299 1 1948 160 6 6 chr17 42117176 42117488 -43320992 + AluJo SINE Alu 1 312 0 2244 99 7 7 chr17 42117854 42118147 -43320333 + AluSx SINE Alu 1 293 -19 351 296 51 67 chr17 42118346 42118828 -43319652 - L1ME3 LINE L1 -80 6090 5630 1723 185 3 14 chr17 42118828 42119125 -43319355 + AluJo SINE Alu 1 294 -18 351 296 51 67 chr17 42119125 42119239 -43319241 - L1ME3 LINE L1 -540 5630 5516 2322 105 0 7 chr17 42119499 42119805 -43318675 - AluSq SINE Alu -9 304 1 2117 138 3 0 chr17 42119805 42120103 -43318377 - AluSx SINE Alu -9 303 5 817 324 88 46 chr17 42120730 42121230 -43317250 - L3 LINE CR1 -1 1576 1056 2197 106 3 7 chr17 42121562 42121855 -43316625 + AluSx SINE Alu 1 292 -20 2402 60 3 0 chr17 42121996 42122278 -43316202 + AluSc SINE Alu 7 289 -20 756 297 188 36 chr17 42122388 42122831 -43315649 - L2 LINE L2 -50 3222 2848 2180 127 0 13 chr17 42122831 42123146 -43315334 - AluSp SINE Alu -2 311 1 756 297 188 36 chr17 42123146 42123575 -43314905 - L2 LINE L2 -424 2848 2227 839 142 0 0 chr17 42123634 42123747 -43314733 + FLAM_C SINE Alu 6 118 -25 1943 119 12 35 chr17 42123763 42124082 -43314398 - AluSx SINE Alu 0 312 1 25 0 0 0 chr17 42124090 42124115 -43314365 + AT_rich Low_complexity Low_complexity 1 25 0 1105 173 96 37 chr17 42124414 42124441 -43314039 + L1MB7 LINE L1 5850 5874 -310 1717 162 10 36 chr17 42124441 42124576 -43313904 + AluJb SINE Alu 3 140 -172 2216 115 3 0 chr17 42124576 42124872 -43313608 + AluSq SINE Alu 3 299 -14 1717 162 10 36 chr17 42124872 42125039 -43313441 + AluJb SINE Alu 140 297 -15 1105 173 96 37 chr17 42125039 42125282 -43313198 + L1MB7 LINE L1 5874 6136 -48 1032 182 0 0 chr17 42125290 42125460 -43313020 + FRAM SINE Alu 2 171 -5 620 180 9 4 chr17 42125518 42125727 -43312753 + AluJ SINE Alu 2 293 -19 1685 174 7 27 chr17 42126353 42126491 -43311989 + AluJb SINE Alu 1 140 -172 2102 104 7 3 chr17 42126491 42126778 -43311702 + AluSg SINE Alu 5 292 -18 1685 174 7 27 chr17 42126778 42126932 -43311548 + AluJb SINE Alu 140 287 -25 253 185 74 0 chr17 42127303 42127357 -43311123 - L1MC/D LINE L1 -1898 5910 5853 231 36 0 0 chr17 42127358 42127386 -43311094 + (TG)n Simple_repeat Simple_repeat 1 28 0 526 128 26 0 chr17 42127386 42127464 -43311016 - AluSc SINE Alu -33 276 197 2399 89 0 3 chr17 42127803 42128107 -43310373 - AluSp SINE Alu -10 303 1 2022 95 81 14 chr17 42128249 42128532 -43309948 - AluSg SINE Alu -8 302 1 2510 63 7 0 chr17 42130877 42131177 -43307303 - AluY SINE Alu -9 302 1 299 298 250 36 chr17 42131289 42131621 -43306859 - L2 LINE L2 -5 3267 2865 303 185 0 0 chr17 42131672 42131726 -43306754 - L1MB7 LINE L1 0 6184 6131 1291 166 0 48 chr17 42131740 42131915 -43306565 - AluJb SINE Alu -10 302 139 2366 109 0 0 chr17 42131915 42132227 -43306253 - AluSq SINE Alu -1 312 1 1291 166 0 48 chr17 42132227 42132280 -43306200 - AluJb SINE Alu -173 139 85 2255 88 3 0 chr17 42132287 42132606 -43305874 - AluSp SINE Alu 0 320 1 242 150 0 0 chr17 42132606 42132646 -43305834 - L1MB7 LINE L1 -43 6141 6102 1112 142 33 12 chr17 42132646 42132942 -43305538 + MER2 DNA MER2_type 8 343 -2 1643 152 39 58 chr17 42132943 42133304 -43305176 - L1MB8 LINE L1 -81 6097 5744 228 189 0 0 chr17 42133307 42133344 -43305136 + AluJo SINE Alu 2 38 -264 1380 192 4 12 chr17 42133446 42133696 -43304784 + AluJo SINE Alu 46 293 -19 754 288 47 42 chr17 42133918 42134467 -43304013 + L1ME4a LINE L1 5559 6110 -11 804 256 113 26 chr17 42134511 42134526 -43303954 - MIR SINE MIR 0 262 250 2111 136 0 3 chr17 42134526 42134828 -43303652 - AluSc SINE Alu -8 301 1 804 256 113 26 chr17 42134828 42135042 -43303438 - MIR SINE MIR -12 250 13 23 0 0 0 chr17 42135314 42135337 -43303143 + AT_rich Low_complexity Low_complexity 1 23 0 286 195 195 20 chr17 42135369 42135518 -43302962 - L1ME4a LINE L1 -68 6053 5879 266 204 204 30 chr17 42135528 42135660 -43302820 - L1ME4a LINE L1 -4 6117 5963 1825 161 3 25 chr17 42135773 42136090 -43302390 - AluJb SINE Alu -2 310 1 358 270 117 18 chr17 42137393 42137556 -43300924 + MIR SINE MIR 84 262 0 220 205 0 0 chr17 42137551 42137590 -43300890 - L2 LINE L2 -2 3270 3232 * 192 260 0 40 chr17 42137689 42137739 -43300741 - L2 LINE L2 -1 3271 3224 195 369 62 0 chr17 42137784 42137849 -43300631 + L2 LINE L2 3156 3224 -48 4945 134 16 23 chr17 42137923 42138828 -43299652 - L1MB4 LINE L1 -1 6179 5282 764 173 31 0 chr17 42138864 42138991 -43299489 - FLAM_C SINE Alu -1 132 2 1924 113 0 0 chr17 42139036 42139284 -43299196 + AluSx SINE Alu 37 284 -28 2160 124 27 0 chr17 42140306 42140604 -43297876 - AluSx SINE Alu -6 306 1 2454 83 7 0 chr17 42141808 42142110 -43296370 + AluSp SINE Alu 1 304 -9 2316 116 3 0 chr17 42142123 42142433 -43296047 + AluSx SINE Alu 1 311 -1 410 271 37 0 chr17 42142662 42142769 -43295711 - MIR SINE MIR -58 150 40 21 36 0 0 chr17 42144175 42144203 -43294277 + AT_rich Low_complexity Low_complexity 1 28 0 695 195 0 0 chr17 42144417 42144545 -43293935 - FLAM_C SINE Alu -6 137 10 835 174 8 0 chr17 42145097 42145229 -43293251 - FLAM_A SINE Alu 0 133 1 23 0 0 0 chr17 42146228 42146251 -43292229 + AT_rich Low_complexity Low_complexity 1 23 0 207 308 105 23 chr17 42147120 42147253 -43291227 - MIR SINE MIR -99 163 20 243 0 0 0 chr17 42150070 42150097 -43288383 + (TG)n Simple_repeat Simple_repeat 1 27 0 307 109 0 2 chr17 42150965 42151142 -43287338 + AluSq SINE Alu 84 294 -8 203 0 37 0 chr17 42151160 42151187 -43287293 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 690 158 15 53 chr17 42151485 42151618 -43286862 - FLAM_C SINE Alu -1 132 5 2175 121 10 0 chr17 42151680 42151987 -43286493 + AluSx SINE Alu 3 312 0 324 155 37 0 chr17 42152963 42153032 -43285448 - FLAM SINE Alu -2 131 70 237 91 0 0 chr17 42153327 42153360 -43285120 - Alu SINE Alu -270 33 1 1069 161 14 60 chr17 42153365 42153583 -43284897 - MER20 DNA MER1_type 0 219 12 2186 96 0 4 chr17 42153613 42153893 -43284587 + AluSg SINE Alu 1 279 -31 234 0 0 0 chr17 42153901 42153927 -43284553 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 321 336 41 0 chr17 42153950 42154072 -43284408 - MIR3 SINE MIR -50 158 32 1000 85 85 90 chr17 42154389 42154589 -43283891 + MER30 DNA MER1_type 32 230 0 2325 108 3 6 chr17 42154867 42155181 -43283299 + AluSq SINE Alu 1 313 0 2166 120 3 10 chr17 42155195 42155496 -43282984 + AluSx SINE Alu 1 299 -13 2294 95 10 13 chr17 42155496 42155630 -43282850 + AluSg SINE Alu 1 134 -176 2378 70 0 42 chr17 42155630 42155943 -43282537 + AluY SINE Alu 1 300 -11 2294 95 10 13 chr17 42155943 42156114 -43282366 + AluSg SINE Alu 134 305 -5 713 293 168 26 chr17 42156747 42157407 -43281073 + L2 LINE L2 2560 3313 0 376 212 30 83 chr17 42157899 42157954 -43280526 - MER5A DNA MER1_type -6 183 127 2223 129 0 0 chr17 42157954 42158265 -43280215 + AluSx SINE Alu 1 311 -1 376 212 30 83 chr17 42158265 42158341 -43280139 - MER5A DNA MER1_type -62 127 59 552 167 52 0 chr17 42158353 42158449 -43280031 - FRAM SINE Alu -35 141 41 323 290 37 74 chr17 42160836 42160998 -43277482 + L1M2a LINE L1 174 329 -6839 189 0 0 0 chr17 42161060 42161081 -43277399 + (TC)n Simple_repeat Simple_repeat 1 21 0 189 305 9 105 chr17 42161566 42161671 -43276809 - L2 LINE L2 -3 3269 3175 369 0 0 0 chr17 42162978 42163019 -43275461 + (TG)n Simple_repeat Simple_repeat 1 41 0 224 261 14 0 chr17 42163265 42163334 -43275146 + G-rich Low_complexity Low_complexity 6 75 0 414 0 0 0 chr17 42163718 42163764 -43274716 + (TG)n Simple_repeat Simple_repeat 2 47 0 296 295 275 0 chr17 42164602 42164751 -43273729 - MIR SINE MIR 0 262 73 180 196 250 0 chr17 42164812 42164868 -43273612 + MIR SINE MIR 182 251 -11 210 288 178 0 chr17 42165137 42165210 -43273270 - L2 LINE L2 -5 3267 3182 288 344 20 33 chr17 42165369 42165520 -43272960 - MIR3 SINE MIR -7 201 53 186 216 0 20 chr17 42165613 42165664 -43272816 + L2 LINE L2 3004 3053 -219 2328 94 17 3 chr17 42166142 42166440 -43272040 - AluSq SINE Alu -11 302 1 1369 143 42 14 chr17 42166440 42166619 -43271861 - AluJo SINE Alu -5 307 120 183 80 0 0 chr17 42166619 42166644 -43271836 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1369 143 42 14 chr17 42166644 42166680 -43271800 - AluJo SINE Alu -192 120 86 467 216 9 27 chr17 42166973 42167084 -43271396 - MIR SINE MIR -35 227 119 1751 157 0 58 chr17 42168177 42168490 -43269990 - AluJb SINE Alu -17 295 1 962 41 107 0 chr17 42168961 42169083 -43269397 + AluYa5 SINE Alu 1 135 -176 2633 47 3 0 chr17 42169088 42169388 -43269092 + AluY SINE Alu 1 301 -10 2618 55 7 0 chr17 42169594 42169903 -43268577 - AluY SINE Alu 0 311 1 25 0 0 0 chr17 42170664 42170689 -43267791 + AT_rich Low_complexity Low_complexity 1 25 0 735 174 8 0 chr17 42170689 42170821 -43267659 - FLAM_C SINE Alu 0 133 1 455 113 0 0 chr17 42170825 42170896 -43267584 - AluJo SINE Alu -8 304 234 557 132 0 114 chr17 42170901 42170935 -43267545 - AluJo SINE Alu -153 159 123 2469 87 0 7 chr17 42170935 42171245 -43267235 - AluSx SINE Alu -4 308 1 557 132 0 114 chr17 42171245 42171324 -43267156 - AluJo SINE Alu -189 123 59 1941 114 107 0 chr17 42171759 42172030 -43266450 + AluSp SINE Alu 1 300 -13 252 271 108 23 chr17 42172061 42172190 -43266290 - MIR SINE MIR -42 220 81 436 240 0 10 chr17 42172648 42172752 -43265728 - MIR3 SINE MIR -4 204 102 2360 113 0 0 chr17 42173063 42173374 -43265106 - AluSq SINE Alu -2 311 1 2541 59 10 3 chr17 42173607 42173914 -43264566 + AluY SINE Alu 1 309 -2 822 214 78 48 chr17 42174029 42174126 -43264354 + MER58B DNA MER1_type 54 147 -2273 1950 141 24 3 chr17 42174126 42174417 -43264063 - AluSx SINE Alu -15 297 1 822 214 78 48 chr17 42174417 42174590 -43263890 + MER58B DNA MER1_type 147 332 -9 248 293 0 13 chr17 42174713 42174788 -43263692 - MIR SINE MIR -161 101 28 195 350 60 0 chr17 42174865 42174982 -43263498 - L2 LINE L2 -257 3056 2933 271 265 59 20 chr17 42176416 42176518 -43261962 - MIR3 SINE MIR -49 159 54 336 186 43 0 chr17 42176975 42177045 -43261435 - L2 LINE L2 -18 3254 3182 185 307 138 32 chr17 42177044 42177185 -43261295 - MIR SINE MIR 0 262 95 * 2467 91 3 0 chr17 42177185 42177494 -43260986 + AluSp SINE Alu 3 312 -1 185 307 138 32 chr17 42177494 42177541 -43260939 - MIR SINE MIR -167 95 54 231 304 61 17 chr17 42177644 42177759 -43260721 - L2 LINE L2 -236 3036 2917 454 257 97 7 chr17 42178081 42178225 -43260255 + MIR SINE MIR 106 262 0 180 269 11 86 chr17 42178262 42178355 -43260125 - L3b LINE CR1 -175 1408 1323 262 346 94 0 chr17 42179041 42179339 -43259141 + L1ME3A LINE L1 5536 5873 -291 * 1060 251 35 57 chr17 42179328 42179698 -43258782 + L1ME3 LINE L1 5793 6154 -8 1878 144 31 7 chr17 42179837 42180129 -43258351 + AluJo SINE Alu 5 303 -9 2334 118 0 0 chr17 42180623 42180928 -43257552 - AluSq SINE Alu -8 305 1 1261 151 75 98 chr17 42180928 42181118 -43257362 - MER58B DNA MER1_type -2086 334 141 845 74 41 0 chr17 42181118 42181239 -43257241 - L1PA13 LINE L1 0 6163 6038 180 77 0 0 chr17 42181240 42181266 -43257214 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1261 151 75 98 chr17 42181266 42181277 -43257203 - MER58B DNA MER1_type -2279 141 131 2242 118 0 0 chr17 42181277 42181573 -43256907 + AluSx SINE Alu 1 296 -16 1783 154 11 4 chr17 42181577 42181857 -43256623 - AluJo SINE Alu -30 282 1 1261 151 75 98 chr17 42181857 42181952 -43256528 - MER58B DNA MER1_type -2292 128 37 275 216 0 0 chr17 42181987 42182038 -43256442 + MIR SINE MIR 211 261 -1 * 356 284 165 0 chr17 42182019 42182146 -43256334 - MIR3 SINE MIR -31 177 30 553 237 147 31 chr17 42182340 42182410 -43256070 + L1ME3A LINE L1 5915 5975 -195 2245 115 7 0 chr17 42182410 42182715 -43255765 + AluSq SINE Alu 1 307 -6 553 237 147 31 chr17 42182715 42182868 -43255612 + L1ME3A LINE L1 5975 6164 -6 2457 61 6 52 chr17 42182884 42183210 -43255270 + AluY SINE Alu 1 311 0 2606 63 0 0 chr17 42183417 42183716 -43254764 + AluSg SINE Alu 2 300 -10 2361 108 0 7 chr17 42183731 42184036 -43254444 + AluSx SINE Alu 1 303 -9 290 170 19 19 chr17 42184061 42184167 -43254313 + (TG)n Simple_repeat Simple_repeat 1 106 0 342 284 18 12 chr17 42184200 42184369 -43254111 + (TG)n Simple_repeat Simple_repeat 2 171 0 210 231 0 25 chr17 42184380 42184501 -43253979 + (TG)n Simple_repeat Simple_repeat 1 118 0 2201 142 3 0 chr17 42185357 42185687 -43252793 - AluSx SINE Alu 0 331 1 2185 144 0 0 chr17 42185798 42186103 -43252377 - AluSx SINE Alu -7 305 1 285 390 29 0 chr17 42186135 42186271 -43252209 + L2 LINE L2 3106 3245 -27 207 0 0 0 chr17 42186286 42186309 -43252171 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 2211 135 0 16 chr17 42186548 42186729 -43251751 - AluSq SINE Alu 0 313 138 2512 61 0 26 chr17 42186729 42187040 -43251440 - AluY SINE Alu -8 303 1 2211 135 0 16 chr17 42187040 42187176 -43251304 - AluSq SINE Alu -175 138 1 2284 75 0 37 chr17 42187176 42187513 -43250967 - AluY SINE Alu 0 326 1 1946 101 43 0 chr17 42187516 42187773 -43250707 - AluSx SINE Alu -17 295 28 721 134 134 8 chr17 42187776 42187903 -43250577 - AluSq/x SINE Alu -168 144 2 270 0 0 0 chr17 42188233 42188263 -43250217 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 381 216 41 21 chr17 42188263 42188360 -43250120 + MIR3 SINE MIR 82 180 -28 2166 116 3 7 chr17 42188473 42188766 -43249714 + AluSx SINE Alu 3 294 -18 372 306 102 34 chr17 42188805 42189040 -43249440 + MIR SINE MIR 12 262 0 209 196 0 0 chr17 42190818 42190864 -43247616 + (CTAAG)n Simple_repeat Simple_repeat 4 49 0 568 228 47 29 chr17 42191559 42191775 -43246705 + MIR SINE MIR 37 254 -8 1855 124 55 11 chr17 42191776 42192090 -43246390 - AluSg SINE Alu 0 310 1 372 295 9 0 chr17 42192421 42192533 -43245947 - MIR SINE MIR -57 151 39 225 295 0 0 chr17 42193044 42193105 -43245375 - MIR SINE MIR -112 150 90 345 326 14 7 chr17 42193505 42193649 -43244831 + GA-rich Low_complexity Low_complexity 3 147 0 455 292 7 28 chr17 42193977 42194121 -43244359 + L2 LINE L2 3169 3309 -4 252 0 0 0 chr17 42194236 42194264 -43244216 + (CA)n Simple_repeat Simple_repeat 2 29 0 204 40 0 0 chr17 42194840 42194865 -43243615 + (ATG)n Simple_repeat Simple_repeat 2 26 0 255 262 0 16 chr17 42195198 42195259 -43243221 + L2 LINE L2 3254 3313 0 1320 186 11 0 chr17 42195547 42195810 -43242670 - L1MD3 LINE L1 0 7995 7730 2342 92 0 29 chr17 42196034 42196348 -43242132 + AluSx SINE Alu 1 305 -7 557 187 0 9 chr17 42196954 42197061 -43241419 - FLAM_C SINE Alu -36 107 2 2305 84 0 7 chr17 42197692 42197998 -43240482 - AluSq SINE Alu 0 304 1 792 336 100 40 chr17 42198942 42199982 -43238498 + L2 LINE L2 1714 2815 -499 47 0 0 0 chr17 42200024 42200071 -43238409 + AT_rich Low_complexity Low_complexity 1 47 0 674 215 0 0 chr17 42200074 42200195 -43238285 - FLAM_C SINE Alu -20 123 3 220 304 191 9 chr17 42200452 42200567 -43237913 + L2 LINE L2 3137 3272 0 2400 98 0 3 chr17 42200615 42200922 -43237558 - AluY SINE Alu -5 306 1 2085 112 4 4 chr17 42201097 42201375 -43237105 - AluSx SINE Alu -34 278 1 3034 117 4 0 chr17 42201375 42201827 -43236653 - MER41B LTR ERV1 -181 454 1 1927 149 31 3 chr17 42202251 42202540 -43235940 - AluJb SINE Alu -11 301 5 248 358 26 20 chr17 42202564 42202715 -43235765 + L2 LINE L2 2896 3047 -225 417 303 3 7 chr17 42203090 42203236 -43235244 + MIR SINE MIR 22 171 -37 2581 54 0 3 chr17 42203369 42203667 -43234813 - AluY SINE Alu -14 297 1 26 0 0 0 chr17 42204110 42204136 -43234344 + AT_rich Low_complexity Low_complexity 1 26 0 413 291 35 35 chr17 42204522 42204663 -43233817 + MIR3 SINE MIR 32 172 -36 1832 166 0 20 chr17 42205446 42205748 -43232732 + AluJb SINE Alu 1 296 -16 2355 105 0 0 chr17 42205751 42206055 -43232425 + AluSx SINE Alu 1 304 -8 235 175 0 70 chr17 42206106 42206163 -43232317 + MER91B DNA MER1_type 25 77 -113 321 306 39 78 chr17 42206163 42206343 -43232137 - MLT1K LTR MaLR -114 474 302 288 70 0 0 chr17 42206456 42206499 -43231981 + (CA)n Simple_repeat Simple_repeat 2 44 0 1843 161 0 33 chr17 42206795 42207099 -43231381 + AluJo SINE Alu 4 297 -15 198 326 0 27 chr17 42207876 42207950 -43230530 - MIR SINE MIR -107 101 38 396 317 92 0 chr17 42208039 42208181 -43230299 - MIR SINE MIR -24 238 84 1816 96 144 4 chr17 42208247 42208518 -43229962 - AluSg1 SINE Alu 0 309 1 1538 110 5 0 chr17 42208521 42208721 -43229759 - AluSp SINE Alu -16 297 97 311 113 19 0 chr17 42208874 42208927 -43229553 + CT-rich Low_complexity Low_complexity 2 55 0 2288 119 3 0 chr17 42208927 42209229 -43229251 - AluSx SINE Alu -9 303 1 275 319 145 0 chr17 42209270 42209408 -43229072 + MIR SINE MIR 97 254 -8 1503 272 105 44 chr17 42209445 42209658 -43228822 + L3 LINE CR1 631 829 -748 2331 115 0 0 chr17 42209658 42209962 -43228518 + AluSx SINE Alu 2 305 -7 1503 272 105 44 chr17 42209962 42210250 -43228230 + L3 LINE CR1 829 1098 -479 3662 101 37 5 chr17 42210250 42210812 -43227668 + LTR19B LTR ERV1 1 580 0 1503 272 105 44 chr17 42210812 42210861 -43227619 + L3 LINE CR1 1098 1143 -434 1023 223 209 39 chr17 42210861 42211324 -43227156 - MLT1F LTR MaLR 0 542 1 1503 272 105 44 chr17 42211324 42211617 -43226863 + L3 LINE CR1 1143 1528 -49 424 234 108 44 chr17 42211865 42212012 -43226468 - MLT1J LTR MaLR -113 398 242 423 117 67 117 chr17 42212012 42212056 -43226424 + LTR52 LTR ERVL 1 46 -375 2373 102 0 7 chr17 42212056 42212361 -43226119 - AluSg SINE Alu -6 304 2 423 117 67 117 chr17 42212361 42212436 -43226044 + LTR52 LTR ERVL 46 114 -307 359 109 109 0 chr17 42212452 42212516 -43225964 + FLAM_A SINE Alu 35 105 -28 2276 110 0 10 chr17 42212627 42212927 -43225553 + AluSx SINE Alu 1 297 -15 2196 131 8 57 chr17 42212934 42213317 -43225163 - THE1B LTR MaLR 0 364 1 312 222 28 0 chr17 42213318 42213390 -43225090 - MER96B DNA MER1_type? -325 92 19 1658 166 4 4 chr17 42213663 42213916 -43224564 - AluJb SINE Alu -39 273 21 1514 191 148 34 chr17 42214165 42214578 -43223902 + MER31B LTR ERV1 1 460 -6 1073 103 0 0 chr17 42214579 42214715 -43223765 + AluSx SINE Alu 1 136 -176 2462 72 0 0 chr17 42214719 42215012 -43223468 + AluY SINE Alu 4 296 -15 275 105 0 67 chr17 42215014 42215119 -43223361 + (TA)n Simple_repeat Simple_repeat 2 99 0 1224 133 0 0 chr17 42215119 42215292 -43223188 + AluSx SINE Alu 125 297 -15 457 305 173 30 chr17 42215313 42215706 -43222774 + L2 LINE L2 2824 3272 0 1505 214 82 51 chr17 42215793 42215996 -43222484 - MER39 LTR ERV1 -20 687 492 2352 92 0 7 chr17 42215996 42216302 -43222178 + AluSx SINE Alu 1 304 -8 1505 214 82 51 chr17 42216302 42216585 -43221895 - MER39 LTR ERV1 -215 492 1 242 333 100 38 chr17 42217799 42218039 -43220441 + L2 LINE L2 2829 3083 -189 2178 137 0 9 chr17 42218040 42218355 -43220125 + AluSx SINE Alu 1 312 0 2312 98 0 3 chr17 42218361 42218656 -43219824 + AluSq SINE Alu 2 295 -18 2404 68 0 7 chr17 42218667 42218960 -43219520 + AluY SINE Alu 1 291 -20 856 191 26 0 chr17 42218993 42219145 -43219335 - MER5A DNA MER1_type -3 186 31 2302 89 7 0 chr17 42219215 42219506 -43218974 - AluSx SINE Alu -2 310 18 225 216 216 23 chr17 42219550 42219638 -43218842 + L2 LINE L2 3168 3272 0 652 114 0 41 chr17 42219737 42219860 -43218620 - MER41B LTR ERV1 0 635 518 319 184 172 0 chr17 42220091 42220178 -43218302 + LTR52 LTR ERVL 105 206 -215 655 170 0 0 chr17 42220196 42220302 -43218178 - MER66B LTR ERV1 -2 484 379 2147 130 0 13 chr17 42220307 42220472 -43218008 - AluSx SINE Alu -16 296 135 2428 78 0 23 chr17 42220472 42220778 -43217702 - AluY SINE Alu -12 299 1 2147 130 0 13 chr17 42220778 42220912 -43217568 - AluSx SINE Alu -177 135 1 1137 67 0 8 chr17 42220915 42221049 -43217431 - AluSq/x SINE Alu -179 133 1 2149 178 5 18 chr17 42221049 42221448 -43217032 - MER66B LTR ERV1 -92 394 1 537 213 41 8 chr17 42221448 42221570 -43216910 - MLT1J LTR MaLR -366 145 20 195 232 0 134 chr17 42221571 42221618 -43216862 - MIR SINE MIR -115 147 95 2111 130 36 0 chr17 42221618 42221919 -43216561 + AluSx SINE Alu 1 312 0 2155 101 27 10 chr17 42221920 42222216 -43216264 + AluSx SINE Alu 1 301 -11 195 232 0 134 chr17 42222216 42222248 -43216232 - MIR SINE MIR -166 96 77 284 233 33 17 chr17 42228505 42228625 -43209855 + (CACCC)n Simple_repeat Simple_repeat 3 124 0 188 273 0 0 chr17 42232131 42232186 -43206294 + L2 LINE L2 3139 3193 -79 224 211 0 0 chr17 42232192 42232230 -43206250 + MIR SINE MIR 225 262 0 332 347 174 0 chr17 42232473 42232617 -43205863 + L2 LINE L2 3104 3272 0 222 164 0 0 chr17 42232625 42232680 -43205800 + (TATTG)n Simple_repeat Simple_repeat 3 57 0 2085 123 7 3 chr17 42232683 42232967 -43205513 - AluSx SINE Alu -27 285 1 931 142 8 0 chr17 42232968 42233102 -43205378 - AluSq/x SINE Alu -178 135 1 381 289 31 8 chr17 42233437 42233565 -43204915 - MLT1H LTR MaLR -324 225 95 993 307 48 21 chr17 42233743 42234180 -43204300 + MLT1J LTR MaLR 1 449 -62 852 181 0 60 chr17 42235179 42235361 -43203119 - AluJb SINE Alu -5 307 137 202 118 0 29 chr17 42235400 42235421 -43203059 + (GGAA)n Simple_repeat Simple_repeat 4 25 -11 2354 71 0 3 chr17 42235421 42235717 -43202763 - AluY SINE Alu -16 295 1 202 118 0 29 chr17 42235717 42235729 -43202751 + (GGAA)n Simple_repeat Simple_repeat 25 36 0 349 236 45 96 chr17 42235747 42235904 -43202576 - MIR SINE MIR -94 168 20 298 231 21 105 chr17 42237213 42237356 -43201124 + MIR SINE MIR 16 146 -62 513 286 146 5 chr17 42237742 42237948 -43200532 + MIR SINE MIR 28 262 0 402 291 109 5 chr17 42238119 42238329 -43200151 - MIR SINE MIR -4 258 33 2239 231 99 31 chr17 42238978 42239271 -43199209 + MER115 DNA AcHobo 4 276 -417 270 0 0 0 chr17 42239271 42239301 -43199179 + (TG)n Simple_repeat Simple_repeat 2 31 0 2239 231 99 31 chr17 42239301 42239653 -43198827 + MER115 DNA AcHobo 276 693 0 235 302 14 115 chr17 42239727 42239780 -43198700 - MIR3 SINE MIR -69 139 82 2343 67 42 0 chr17 42239780 42240063 -43198417 + AluY SINE Alu 1 295 -16 235 302 14 115 chr17 42240063 42240148 -43198332 - MIR3 SINE MIR -126 82 15 1956 152 0 23 chr17 42241131 42241434 -43197046 - AluJb SINE Alu -16 296 1 417 70 0 0 chr17 42241535 42241592 -43196888 + (CA)n Simple_repeat Simple_repeat 1 57 0 2137 122 3 31 chr17 42242135 42242454 -43196026 - AluJb SINE Alu -2 310 1 914 163 67 1 chr17 42242479 42242794 -43195686 - MER58D DNA MER1_type -3 383 7 2196 78 68 0 chr17 42243097 42243378 -43195102 - AluSp SINE Alu -13 300 1 1621 101 4 40 chr17 42243378 42243567 -43194913 - AluSq SINE Alu 0 313 140 2059 100 0 70 chr17 42243567 42243868 -43194612 - AluSg SINE Alu -19 291 12 1621 101 4 40 chr17 42243868 42243948 -43194532 - AluSq SINE Alu -173 140 59 208 208 21 21 chr17 42244093 42244141 -43194339 - MER5B DNA MER1_type -52 126 79 248 282 103 0 chr17 42244675 42244792 -43193688 - L1MC4 LINE L1 0 8042 7914 2278 131 0 0 chr17 42244808 42245120 -43193360 + AluSx SINE Alu 1 312 0 2178 208 48 43 chr17 42245155 42245341 -43193139 - L1MD2 LINE L1 -227 6132 5948 1575 154 26 82 chr17 42245341 42245647 -43192833 - AluJb SINE Alu -23 289 1 2178 208 48 43 chr17 42245647 42246017 -43192463 - L1MD2 LINE L1 -411 5948 5573 310 339 37 0 chr17 42246018 42246127 -43192353 - L1MC4 LINE L1 -152 7890 7778 2281 104 7 23 chr17 42246182 42246491 -43191989 + AluSq SINE Alu 1 304 -9 281 231 62 0 chr17 42246503 42246568 -43191912 + L1MB7 LINE L1 4280 4348 -1798 1105 192 32 58 chr17 42246575 42246748 -43191732 + L1MB7 LINE L1 4420 4583 -1563 2220 211 62 30 chr17 42246748 42247246 -43191234 + MLT2B2 LTR ERVL 2 515 0 1105 192 32 58 chr17 42247246 42247385 -43191095 + L1MB7 LINE L1 4583 4724 -1422 2374 104 0 0 chr17 42247386 42247704 -43190776 + AluSq SINE Alu 1 318 0 2978 175 20 8 chr17 42247704 42248295 -43190185 + L1MB7 LINE L1 5432 6032 -152 1867 158 0 23 chr17 42248295 42248598 -43189882 - AluJo SINE Alu -16 296 1 2385 113 0 3 chr17 42248886 42249197 -43189283 - AluSg SINE Alu 0 310 1 299 277 50 40 chr17 42249286 42249353 -43189127 - MIR SINE MIR -70 192 122 2276 123 0 19 chr17 42249353 42249670 -43188810 + AluSx SINE Alu 1 311 -1 299 277 50 40 chr17 42249670 42249703 -43188777 - MIR SINE MIR -140 122 91 327 226 70 61 chr17 42250818 42250933 -43187547 + MIR3 SINE MIR 93 208 0 2430 96 0 0 chr17 42250937 42251239 -43187241 + AluSx SINE Alu 1 302 -10 2216 80 35 3 chr17 42251239 42251526 -43186954 + AluY SINE Alu 1 296 -15 850 113 0 0 chr17 42251639 42251754 -43186726 - AluY SINE Alu -18 293 179 434 348 68 5 chr17 42251903 42252124 -43186356 - MIR SINE MIR -23 239 5 317 208 8 116 chr17 42252492 42252624 -43185856 + MIR SINE MIR 62 179 -63 1974 150 3 0 chr17 42252676 42252970 -43185510 + AluJo SINE Alu 2 296 -16 2411 90 6 13 chr17 42253131 42253443 -43185037 - AluSx SINE Alu -2 310 1 255 274 14 27 chr17 42253452 42253525 -43184955 - MIR SINE MIR -74 188 117 357 315 16 0 chr17 42254034 42254161 -43184319 + (CA)n Simple_repeat Simple_repeat 1 129 0 326 323 87 36 chr17 42255299 42255494 -43182986 - MIR SINE MIR -35 227 23 228 35 0 0 chr17 42255557 42255586 -43182894 + (TG)n Simple_repeat Simple_repeat 1 29 0 * 348 43 0 0 chr17 42255585 42255631 -43182849 + (GA)n Simple_repeat Simple_repeat 1 46 0 192 250 17 33 chr17 42255746 42255806 -43182674 + L2 LINE L2 3214 3272 0 361 210 90 30 chr17 42255910 42256010 -43182470 - MIR SINE MIR -129 133 28 556 105 0 19 chr17 42256017 42256122 -43182358 + (TG)n Simple_repeat Simple_repeat 1 103 0 1858 114 88 4 chr17 42256194 42256466 -43182014 - AluSg SINE Alu -15 295 1 423 83 0 0 chr17 42257480 42257540 -43180940 + (TCCA)n Simple_repeat Simple_repeat 1 60 0 369 315 85 15 chr17 42257544 42257744 -43180736 - L2 LINE L2 -18 3295 3082 2271 103 7 0 chr17 42257790 42258080 -43180400 - AluSx SINE Alu -20 292 1 1662 143 4 23 chr17 42259103 42259368 -43179112 + AluJo SINE Alu 1 260 -52 192 40 0 0 chr17 42259384 42259409 -43179071 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 312 329 113 44 chr17 42259491 42260148 -43178332 - L2 LINE L2 -340 2974 2273 657 266 105 31 chr17 42260247 42260533 -43177947 - MLT1I LTR MaLR -43 366 60 615 298 39 0 chr17 42260628 42260806 -43177674 + MIR SINE MIR 71 255 -7 1011 178 5 20 chr17 42260810 42261007 -43177473 + L1MB3 LINE L1 5990 6183 0 2125 78 82 0 chr17 42261012 42261293 -43177187 + AluSx SINE Alu 1 304 -8 264 285 60 64 chr17 42261298 42261533 -43176947 - L2 LINE L2 -1120 2194 1961 2153 102 51 0 chr17 42261787 42262082 -43176398 + AluSp SINE Alu 1 310 -3 204 274 302 16 chr17 42264511 42264694 -43173786 - MIR SINE MIR -11 251 21 427 280 74 34 chr17 42264823 42264998 -43173482 + MER5A DNA MER1_type 2 183 -6 662 225 21 99 chr17 42265008 42265147 -43173333 + MER5B DNA MER1_type 3 125 -53 2253 60 20 13 chr17 42265147 42265448 -43173032 + AluSx SINE Alu 1 303 -9 662 225 21 99 chr17 42265448 42265499 -43172981 + MER5B DNA MER1_type 125 178 0 203 345 0 24 chr17 42265508 42265592 -43172888 + G-rich Low_complexity Low_complexity 2 83 0 916 183 24 0 chr17 42266151 42266315 -43172165 + MER5A DNA MER1_type 9 176 -13 320 211 29 58 chr17 42266337 42266441 -43172039 + MER5A DNA MER1_type 9 109 -80 537 310 71 0 chr17 42266546 42266730 -43171750 - MIR SINE MIR -28 234 38 2073 71 32 7 chr17 42266763 42267046 -43171434 + AluSg SINE Alu 1 290 -20 2467 58 0 3 chr17 42267287 42267597 -43170883 - AluY SINE Alu -2 309 1 193 269 58 0 chr17 42267603 42267655 -43170825 - MIR SINE MIR -62 146 92 25 0 0 0 chr17 42268219 42268244 -43170236 + GC_rich Low_complexity Low_complexity 1 25 0 554 242 87 0 chr17 42268637 42268786 -43169694 + MIR SINE MIR 42 203 -59 2310 62 0 36 chr17 42268814 42269122 -43169358 + AluSp SINE Alu 1 297 -16 267 312 65 22 chr17 42269478 42269616 -43168864 - MIR SINE MIR -98 164 21 2361 65 7 3 chr17 42270311 42270617 -43167863 + AluY SINE Alu 5 311 0 281 261 0 0 chr17 42270668 42270737 -43167743 + MIR3 SINE MIR 92 160 -48 330 320 39 39 chr17 42271102 42271255 -43167225 + MIR SINE MIR 79 231 -31 187 250 0 0 chr17 42271229 42271269 -43167211 + L2 LINE L2 3210 3249 -23 * 2157 107 0 28 chr17 42271411 42271730 -43166750 - AluSp SINE Alu -3 310 1 559 250 86 0 chr17 42272320 42272472 -43166008 - MIR3 SINE MIR -2 206 42 273 286 38 29 chr17 42272507 42272612 -43165868 - MIR SINE MIR -70 192 87 2300 68 0 3 chr17 42273160 42273452 -43165028 + AluY SINE Alu 1 291 -20 450 276 83 22 chr17 42274596 42274777 -43163703 - MIR SINE MIR -34 228 37 2343 82 0 3 chr17 42274949 42275255 -43163225 - AluY SINE Alu -6 305 1 2171 111 0 0 chr17 42275265 42275563 -43162917 - AluSx SINE Alu -14 298 1 2216 95 3 3 chr17 42275635 42275931 -43162549 - AluSc SINE Alu -13 296 1 1048 146 6 11 chr17 42276185 42276363 -43162117 + MLT1B LTR MaLR 4 180 -210 2064 108 10 3 chr17 42276363 42276659 -43161821 + AluSx SINE Alu 14 311 -1 811 158 0 8 chr17 42276663 42276783 -43161697 + FLAM_C SINE Alu 2 120 -23 2577 154 51 63 chr17 42276805 42276894 -43161586 + L1MB2 LINE L1 5587 5676 -495 2419 79 0 0 chr17 42276894 42277198 -43161282 + AluY SINE Alu 1 304 -7 2577 154 51 63 chr17 42277198 42277314 -43161166 + L1MB2 LINE L1 5676 5792 -379 2456 72 0 0 chr17 42277314 42277618 -43160862 + AluSc SINE Alu 1 304 -5 2577 154 51 63 chr17 42277618 42277665 -43160815 + L1MB2 LINE L1 5792 5838 -333 818 163 0 15 chr17 42277665 42277800 -43160680 + FLAM_C SINE Alu 1 133 0 2577 154 51 63 chr17 42277800 42278136 -43160344 + L1MB2 LINE L1 5838 6170 -1 2000 107 6 52 chr17 42279103 42279610 -43158870 - AluSx SINE Alu 0 312 1 219 178 44 0 chr17 42279999 42280044 -43158436 - L2 LINE L2 -3 3310 3264 * 588 278 43 24 chr17 42280013 42280222 -43158258 - MIR SINE MIR -13 249 37 473 170 7 92 chr17 42280303 42280359 -43158121 - MER96B DNA MER1_type? -48 369 310 1939 124 31 0 chr17 42280359 42280649 -43157831 + AluSg SINE Alu 1 299 -11 473 170 7 92 chr17 42280649 42280733 -43157747 - MER96B DNA MER1_type? -107 310 241 619 198 27 0 chr17 42281670 42281781 -43156699 + MER81 DNA DNA 1 114 0 286 203 19 99 chr17 42283013 42283165 -43155315 - MIR3 SINE MIR -2 206 71 186 43 0 0 chr17 42284288 42284311 -43154169 + (CA)n Simple_repeat Simple_repeat 1 23 0 453 293 25 19 chr17 42285544 42285701 -43152779 - MIR SINE MIR -68 194 37 417 265 32 92 chr17 42285730 42285832 -43152648 + MIR3 SINE MIR 20 108 -100 2514 52 0 3 chr17 42285832 42286137 -43152343 - AluY SINE Alu -7 304 1 417 265 32 92 chr17 42286137 42286219 -43152261 + MIR3 SINE MIR 108 193 -15 453 279 0 8 chr17 42286299 42286421 -43152059 - MIR SINE MIR -110 152 32 2059 125 0 22 chr17 42286454 42286590 -43151890 + AluSx SINE Alu 1 138 -174 2325 72 0 25 chr17 42286590 42286908 -43151572 + AluY SINE Alu 1 310 -1 2059 125 0 22 chr17 42286908 42287090 -43151390 + AluSx SINE Alu 138 312 0 457 296 96 5 chr17 42288092 42288298 -43150182 + MIR SINE MIR 3 227 -35 551 294 29 55 chr17 42288419 42288488 -43149992 + MIR SINE MIR 2 71 -191 2136 120 0 0 chr17 42288488 42288789 -43149691 - AluSx SINE Alu -11 301 1 551 294 29 55 chr17 42288789 42288957 -43149523 + MIR SINE MIR 71 233 -29 204 67 0 0 chr17 42289307 42289337 -43149143 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1107 107 0 0 chr17 42289341 42289490 -43148990 - AluSp SINE Alu -36 277 129 2186 116 3 3 chr17 42289494 42289805 -43148675 - AluSx SINE Alu -1 311 1 207 0 0 0 chr17 42289972 42289995 -43148485 + (TG)n Simple_repeat Simple_repeat 2 24 0 297 167 0 0 chr17 42289995 42290049 -43148431 + (CATATA)n Simple_repeat Simple_repeat 4 57 0 259 250 69 17 chr17 42290245 42290361 -43148119 - MLT1J LTR MaLR -13 498 377 244 261 43 0 chr17 42290403 42290472 -43148008 - MLT1J LTR MaLR -230 281 210 2318 68 0 13 chr17 42290519 42290826 -43147654 + AluY SINE Alu 1 303 -8 2220 95 0 0 chr17 42290836 42291132 -43147348 + AluSg SINE Alu 1 296 -14 698 169 8 8 chr17 42291132 42291250 -43147230 - AluJo/FLAM SINE Alu -184 118 1 1933 126 49 0 chr17 42291258 42291544 -43146936 - AluSx SINE Alu -12 300 1 453 185 83 0 chr17 42291765 42291873 -43146607 - MER53 DNA DNA -72 117 1 520 252 14 49 chr17 42292765 42292997 -43145483 - Charlie8 DNA MER1_type -2181 236 1 360 214 8 94 chr17 42292997 42293114 -43145366 - MIR3 SINE MIR -48 160 54 276 299 35 35 chr17 42293240 42293384 -43145096 - MIR SINE MIR -59 203 60 234 255 51 51 chr17 42293885 42293983 -43144497 + MIR SINE MIR 93 190 -72 493 285 66 0 chr17 42293985 42294136 -43144344 - MIR3 SINE MIR -17 191 31 279 0 0 0 chr17 42294861 42294892 -43143588 + (CA)n Simple_repeat Simple_repeat 1 31 0 2195 110 0 0 chr17 42295165 42295466 -43143014 - AluSq SINE Alu -12 301 1 2210 107 0 0 chr17 42295505 42295813 -43142667 - AluSc SINE Alu -1 308 1 1684 160 17 0 chr17 42296635 42296929 -43141551 - AluJb SINE Alu -13 299 1 355 250 0 0 chr17 42297030 42297106 -43141374 + MIR SINE MIR 47 122 -140 333 0 0 0 chr17 42297819 42297856 -43140624 + (TG)n Simple_repeat Simple_repeat 1 37 0 24 0 0 0 chr17 42298608 42298632 -43139848 + AT_rich Low_complexity Low_complexity 1 24 0 229 147 150 48 chr17 42299812 42299897 -43138583 - MIR SINE MIR -57 151 46 332 296 194 16 chr17 42300286 42300472 -43138008 + MIR SINE MIR 44 262 0 1995 106 23 16 chr17 42301161 42301464 -43137016 - AluSx SINE Alu -7 305 1 268 274 0 0 chr17 42301780 42301842 -43136638 + GA-rich Low_complexity Low_complexity 3 64 0 393 321 30 8 chr17 42302452 42302586 -43135894 + MIR SINE MIR 62 198 -64 195 248 152 19 chr17 42302634 42302739 -43135741 + L2 LINE L2 2945 3063 -209 1034 235 23 34 chr17 42303491 42303755 -43134725 + MIR SINE MIR 2 262 0 2260 100 3 10 chr17 42303764 42304075 -43134405 + AluSg SINE Alu 1 309 -1 699 174 70 47 chr17 42304217 42304314 -43134166 + MER45A DNA AcHobo 1 105 -1476 2041 142 0 13 chr17 42304314 42304623 -43133857 - AluSq SINE Alu -8 305 1 699 174 70 47 chr17 42304623 42304697 -43133783 + MER45A DNA AcHobo 105 176 -2 309 289 35 70 chr17 42304834 42304976 -43133504 - L1MC5 LINE L1 -37 7924 7788 201 297 7 95 chr17 42305344 42305492 -43132988 - MIR SINE MIR -85 177 43 1674 121 73 11 chr17 42306661 42306934 -43131546 + AluJb SINE Alu 1 290 -22 1181 257 24 30 chr17 42306958 42307296 -43131184 - LTR16C LTR ERVL 0 491 156 269 310 121 23 chr17 42307388 42307562 -43130918 - MIR SINE MIR -52 210 20 2245 101 3 3 chr17 42307574 42307881 -43130599 - AluSq SINE Alu -6 307 1 1748 166 17 0 chr17 42308011 42308300 -43130180 - AluJo SINE Alu -14 298 5 2107 104 3 17 chr17 42308315 42308614 -43129866 - AluSp SINE Alu -18 295 1 2406 71 0 0 chr17 42308614 42308910 -43129570 - AluY SINE Alu -15 296 1 1991 148 0 0 chr17 42308910 42309207 -43129273 - AluJb SINE Alu -6 306 10 2031 143 0 0 chr17 42309226 42309520 -43128960 - AluSx SINE Alu -18 294 1 1792 184 132 32 chr17 42310236 42310676 -43127804 - MLT1D LTR MaLR 0 505 22 1659 142 13 55 chr17 42310695 42311005 -43127475 - AluJo SINE Alu -15 297 1 351 255 9 9 chr17 42311007 42311113 -43127367 + MIR SINE MIR 46 151 -57 455 231 4 145 chr17 42311843 42312077 -43126403 - L2 LINE L2 0 3313 3113 270 214 48 0 chr17 42312175 42312263 -43126217 - MIR SINE MIR -62 146 60 429 243 149 14 chr17 42312298 42312446 -43126034 - MER5B DNA MER1_type -6 172 5 212 229 48 48 chr17 42312465 42312548 -43125932 + MIR SINE MIR 106 188 -74 518 202 119 0 chr17 42314168 42314277 -43124203 - MIR SINE MIR -123 139 18 238 340 0 66 chr17 42314284 42314318 -43124162 - MER5A DNA MER1_type -6 183 148 2188 81 0 32 chr17 42314318 42314602 -43123878 + AluSq SINE Alu 21 295 -18 238 340 0 66 chr17 42314602 42314673 -43123807 - MER5A DNA MER1_type -41 148 85 2300 90 10 3 chr17 42314819 42315108 -43123372 - AluSg SINE Alu -19 291 1 615 248 133 9 chr17 42315111 42315329 -43123151 - MIR SINE MIR -4 258 14 913 129 39 7 chr17 42315647 42315802 -43122678 - MER20 DNA MER1_type -13 206 47 1683 163 87 7 chr17 42315942 42316111 -43122369 - AluJo SINE Alu 0 312 158 210 37 0 0 chr17 42316111 42316138 -43122342 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 1683 163 87 7 chr17 42316138 42316257 -43122223 - AluJo SINE Alu -154 158 1 286 295 101 13 chr17 42316457 42316606 -43121874 - MER5B DNA MER1_type -2 176 15 487 269 47 7 chr17 42317011 42317160 -43121320 + MIR SINE MIR 84 238 -24 1927 110 0 0 chr17 42317164 42317460 -43121020 - AluSg SINE Alu 0 332 37 319 280 46 45 chr17 42317468 42317575 -43120905 - MIR SINE MIR -67 141 46 1979 84 91 0 chr17 42317575 42317838 -43120642 - AluSq SINE Alu -21 292 6 319 280 46 45 chr17 42317838 42317866 -43120614 - MIR SINE MIR -162 46 20 184 315 27 0 chr17 42318244 42318317 -43120163 + MIR SINE MIR 33 107 -101 181 217 133 17 chr17 42319196 42319256 -43119224 + MIR3 SINE MIR 115 181 -27 249 302 69 45 chr17 42319427 42319635 -43118845 - MIR SINE MIR -25 237 23 550 254 146 35 chr17 42321069 42321411 -43117069 + L2 LINE L2 2810 3189 -124 260 218 82 64 chr17 42321438 42321548 -43116932 - MLT1H LTR MaLR -16 533 439 346 291 146 0 chr17 42321833 42321943 -43116537 + L2 LINE L2 3184 3309 -4 332 236 203 30 chr17 42322408 42322498 -43115982 + L1MC4 LINE L1 7687 7760 -282 2320 91 10 0 chr17 42322498 42322795 -43115685 - AluSc SINE Alu -9 300 1 332 236 203 30 chr17 42322795 42322941 -43115539 + L1MC4 LINE L1 7760 7879 -163 1720 177 0 27 chr17 42322941 42323241 -43115239 + AluJo SINE Alu 1 292 -20 332 236 203 30 chr17 42323241 42323304 -43115176 + L1MC4 LINE L1 7879 8039 -3 651 219 52 19 chr17 42323823 42323978 -43114502 - MIR SINE MIR -46 216 57 26 0 0 0 chr17 42324037 42324063 -43114417 + AT_rich Low_complexity Low_complexity 1 26 0 2530 53 0 7 chr17 42324077 42324381 -43114099 - AluY SINE Alu -9 302 1 1615 149 42 0 chr17 42324381 42324642 -43113838 - AluJo SINE Alu -40 272 1 800 294 38 11 chr17 42324869 42325131 -43113349 + MLT1K LTR MaLR 88 356 -232 385 239 36 65 chr17 42325430 42325568 -43112912 + MIR SINE MIR 11 144 -118 343 173 66 11 chr17 42327349 42327447 -43111033 + MIR SINE MIR 18 128 -80 352 355 42 9 chr17 42327457 42327671 -43110809 - MIR SINE MIR -22 240 20 2037 153 0 0 chr17 42327893 42328187 -43110293 - AluJo SINE Alu -18 294 1 506 267 56 19 chr17 42328300 42328461 -43110019 + L2 LINE L2 3147 3313 0 401 226 53 30 chr17 42328494 42328627 -43109853 - MIR SINE MIR -46 216 81 449 273 65 26 chr17 42329419 42329573 -43108907 + MIR SINE MIR 25 184 -78 634 293 101 5 chr17 42329620 42329818 -43108662 - MIR SINE MIR -14 248 32 1890 132 3 79 chr17 42330193 42330342 -43108138 + AluJo SINE Alu 1 115 -197 2351 86 24 0 chr17 42330342 42330634 -43107846 + AluSx SINE Alu 1 299 -13 1890 132 3 79 chr17 42330634 42330802 -43107678 + AluJo SINE Alu 115 294 -18 636 259 124 5 chr17 42330881 42331074 -43107406 + MIR SINE MIR 47 262 0 327 308 23 8 chr17 42331127 42331260 -43107220 + L2 LINE L2 2853 2987 -285 190 299 13 13 chr17 42331380 42331457 -43107023 + MIR SINE MIR 177 253 -9 200 276 0 69 chr17 42331525 42331583 -43106897 + MIR SINE MIR 206 259 -3 2306 87 0 14 chr17 42331628 42331941 -43106539 - AluSq SINE Alu 0 309 1 241 242 61 0 chr17 42332023 42332089 -43106391 + MLT1K LTR MaLR 127 196 -392 260 266 53 9 chr17 42332227 42332340 -43106140 + LTR67 LTR ERVL 428 545 -12 1400 178 128 46 chr17 42332729 42333095 -43105385 - MSTD LTR MaLR 0 396 1 2285 113 3 3 chr17 42333827 42334137 -43104343 + AluSg SINE Alu 1 310 0 243 0 0 0 chr17 42334355 42334382 -43104098 + (A)n Simple_repeat Simple_repeat 1 27 0 1076 272 21 32 chr17 42335089 42335464 -43103016 + L1ME1 LINE L1 5546 5916 -205 25 0 0 0 chr17 42336096 42336121 -43102359 + GC_rich Low_complexity Low_complexity 1 25 0 290 305 53 20 chr17 42336536 42336687 -43101793 + L2 LINE L2 2904 3059 -213 665 298 148 25 chr17 42336798 42337157 -43101323 + MLT1I LTR MaLR 1 403 -6 2346 113 3 0 chr17 42337247 42337557 -43100923 - AluSq SINE Alu -2 311 1 426 389 18 4 chr17 42337585 42337811 -43100669 - MIR SINE MIR -3 259 31 213 271 51 0 chr17 42337877 42337936 -43100544 + L2 LINE L2 3114 3175 -97 2433 88 3 0 chr17 42337939 42338235 -43100245 - AluSp SINE Alu -16 297 1 374 272 39 10 chr17 42338274 42338377 -43100103 - L2 LINE L2 0 3313 3208 576 234 31 75 chr17 42338385 42338612 -43099868 + L1ME1 LINE L1 5945 6161 -5 2046 96 62 24 chr17 42338630 42338922 -43099558 + AluY SINE Alu 1 303 -8 385 284 109 16 chr17 42338923 42339106 -43099374 - L2 LINE L2 -95 3218 3019 199 355 0 0 chr17 42339285 42339347 -43099133 + L2 LINE L2 3207 3268 -4 21 0 0 0 chr17 42339649 42339670 -43098810 + AT_rich Low_complexity Low_complexity 1 21 0 2150 91 9 67 chr17 42339714 42340043 -43098437 + AluSg SINE Alu 1 310 0 2160 57 86 11 chr17 42341060 42341339 -43097141 - AluY SINE Alu -11 300 1 2167 57 4 4 chr17 42343176 42343440 -43095040 - AluSg SINE Alu 0 310 47 203 167 0 0 chr17 42343490 42343532 -43094948 + A-rich Low_complexity Low_complexity 1 42 0 206 200 22 0 chr17 42344080 42344125 -43094355 - L2 LINE L2 -3 3310 3265 419 225 11 0 chr17 42344507 42344596 -43093884 - MER91A DNA MER1_type -106 90 1 371 269 22 30 chr17 42344614 42344748 -43093732 - Charlie8 DNA MER1_type -2217 200 68 1738 156 0 55 chr17 42345539 42345846 -43092634 + AluJb SINE Alu 1 290 -22 457 200 0 0 chr17 42345955 42346040 -43092440 + L2 LINE L2 3223 3307 -6 1958 138 50 19 chr17 42347169 42347530 -43090950 - THE1C LTR MaLR -3 372 1 243 177 19 43 chr17 42347550 42347632 -43090848 - MIR SINE MIR -72 136 71 2855 203 30 5 chr17 42347762 42348324 -43090156 + MLT1G LTR MaLR 10 585 -5 315 256 181 15 chr17 42348616 42348749 -43089731 - L2 LINE L2 0 3272 3118 480 248 78 0 chr17 42348781 42348910 -43089570 - MIR SINE MIR -44 218 80 360 252 52 17 chr17 42349368 42349483 -43088997 - MER5B DNA MER1_type -1 177 59 2316 99 10 0 chr17 42349489 42349791 -43088689 - AluSq SINE Alu -8 305 1 293 301 90 32 chr17 42349945 42350017 -43088463 + MIR SINE MIR 92 158 -104 2012 104 10 42 chr17 42350017 42350326 -43088154 + AluSx SINE Alu 2 300 -12 293 301 90 32 chr17 42350326 42350409 -43088071 + MIR SINE MIR 158 256 -6 1220 97 5 43 chr17 42350908 42351094 -43087386 + AluSg/x SINE Alu 119 297 -12 197 300 10 60 chr17 42352191 42352291 -43086189 + MER5A DNA MER1_type 95 189 0 2408 99 0 0 chr17 42352301 42352605 -43085875 - AluSx SINE Alu -8 304 1 220 235 106 0 chr17 42352759 42352844 -43085636 - MIR SINE MIR -2 260 167 1705 174 109 70 chr17 42352989 42353473 -43085007 + MLT1D LTR MaLR 1 503 -2 273 313 84 38 chr17 42353885 42354016 -43084464 - MIR SINE MIR 0 262 126 1990 128 16 48 chr17 42354054 42354428 -43084052 + THE1B LTR MaLR 1 362 -2 390 196 21 126 chr17 42354540 42354623 -43083857 + MER5B DNA MER1_type 44 107 -71 2369 103 0 3 chr17 42354623 42354933 -43083547 - AluSc SINE Alu 0 309 1 390 196 21 126 chr17 42354933 42354992 -43083488 + MER5B DNA MER1_type 107 171 -7 263 198 161 12 chr17 42354994 42355075 -43083405 + MLT1L LTR MaLR 144 236 -379 432 262 24 55 chr17 42355113 42355226 -43083254 + MLT1L LTR MaLR 445 553 -62 1264 164 4 35 chr17 42355226 42355457 -43083023 + MER58A DNA MER1_type 1 224 0 432 262 24 55 chr17 42355457 42355507 -43082973 + MLT1L LTR MaLR 553 603 -12 254 291 68 43 chr17 42355666 42355783 -43082697 + MIR SINE MIR 27 146 -62 1670 215 59 114 chr17 42356007 42356700 -43081780 + MER21B LTR ERV1 40 694 -169 192 263 32 42 chr17 42356762 42356857 -43081623 - L2 LINE L2 -531 2783 2690 3000 154 21 11 chr17 42357937 42358308 -43080172 - L1MB7 LINE L1 -17 6167 5786 2378 162 61 9 chr17 42358308 42358770 -43079710 - MER66B LTR ERV1 0 486 1 3000 154 21 11 chr17 42358770 42358969 -43079511 - L1MB7 LINE L1 -398 5786 5591 363 209 47 0 chr17 42358969 42359055 -43079425 + MER5A DNA MER1_type 100 189 0 1272 146 13 82 chr17 42359072 42359224 -43079256 - MER58D DNA MER1_type -2056 364 203 1573 156 94 4 chr17 42359224 42359500 -43078980 - AluJo SINE Alu 0 312 12 1272 146 13 82 chr17 42359500 42359555 -43078925 - MER58D DNA MER1_type -2217 203 146 207 24 24 48 chr17 42359555 42359597 -43078883 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1272 146 13 82 chr17 42359597 42359704 -43078776 - MER58D DNA MER1_type -2274 146 71 2293 79 7 0 chr17 42359711 42359990 -43078490 + AluSp SINE Alu 7 287 -26 621 197 45 35 chr17 42360138 42360336 -43078144 - L1M4 LINE L1 -395 5789 5590 263 229 72 0 chr17 42360336 42360419 -43078061 + MER5A DNA MER1_type 101 189 0 1272 146 13 82 chr17 42360436 42360588 -43077892 - MER58D DNA MER1_type -2056 364 203 1573 156 94 4 chr17 42360588 42360864 -43077616 - AluJo SINE Alu 0 312 12 1272 146 13 82 chr17 42360864 42360919 -43077561 - MER58D DNA MER1_type -2217 203 146 207 24 24 48 chr17 42360919 42360961 -43077519 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1272 146 13 82 chr17 42360961 42361068 -43077412 - MER58D DNA MER1_type -2274 146 71 2293 79 7 0 chr17 42361075 42361354 -43077126 + AluSp SINE Alu 7 287 -26 364 194 0 0 chr17 42361367 42361429 -43077051 - MER58D DNA MER1_type -303 83 22 614 127 42 17 chr17 42361683 42361801 -43076679 - L1MB7 LINE L1 -255 5929 5809 22 35 0 0 chr17 42363298 42363327 -43075153 + AT_rich Low_complexity Low_complexity 1 29 0 959 151 0 0 chr17 42363351 42363490 -43074990 - AluJb SINE Alu -173 139 1 303 28 0 0 chr17 42363985 42364021 -43074459 + (CA)n Simple_repeat Simple_repeat 1 36 0 245 217 54 54 chr17 42364024 42364116 -43074364 + L1ME4a LINE L1 5965 6056 -65 250 191 43 0 chr17 42365019 42365066 -43073414 + MER57A LTR ERV1 295 343 -60 415 283 0 18 chr17 42365070 42365183 -43073297 + MER5A DNA MER1_type 61 171 -18 867 272 30 17 chr17 42365615 42365985 -43072495 + MLT2E LTR ERVL 3 449 -179 303 95 0 0 chr17 42365985 42366027 -43072453 - MSTA LTR MaLR -1 427 386 855 216 0 18 chr17 42366027 42366194 -43072286 + AluSg/x SINE Alu 136 299 -11 1165 117 9 47 chr17 42366215 42366428 -43072052 - MSTA LTR MaLR -35 393 189 1797 165 28 0 chr17 42366429 42366714 -43071766 - AluJb SINE Alu -19 293 1 2315 97 3 10 chr17 42366723 42367031 -43071449 - AluSp SINE Alu -6 307 2 396 0 0 0 chr17 42367083 42367127 -43071353 + (CA)n Simple_repeat Simple_repeat 2 45 0 254 246 33 0 chr17 42367565 42367626 -43070854 - L2 LINE L2 -76 3237 3175 2223 104 0 0 chr17 42367631 42367909 -43070571 + AluSx SINE Alu 1 278 -34 239 0 32 0 chr17 42367924 42367955 -43070525 + (TAA)n Simple_repeat Simple_repeat 2 33 0 558 257 121 74 chr17 42369052 42369499 -43068981 - L2 LINE L2 -1 3271 2804 447 342 122 19 chr17 42370430 42370979 -43067501 - L2 LINE L2 0 3272 2661 455 309 100 51 chr17 42370979 42371083 -43067397 + L1ME3 LINE L1 5666 5763 -425 2449 98 0 3 chr17 42371083 42371388 -43067092 + AluSx SINE Alu 1 304 -8 455 309 100 51 chr17 42371388 42371573 -43066907 + L1ME3 LINE L1 5763 5965 -223 1967 159 0 3 chr17 42371694 42371990 -43066490 + AluJo SINE Alu 1 295 -17 192 97 0 0 chr17 42372459 42372490 -43065990 + (TG)n Simple_repeat Simple_repeat 1 31 0 2400 80 0 16 chr17 42373010 42373322 -43065158 + AluY SINE Alu 1 307 -4 1376 136 10 5 chr17 42373329 42373535 -43064945 + AluJb SINE Alu 84 290 -22 387 0 0 0 chr17 42373648 42373691 -43064789 + (CA)n Simple_repeat Simple_repeat 1 43 0 688 283 130 34 chr17 42373814 42374168 -43064312 + L2 LINE L2 2926 3313 0 220 233 14 27 chr17 42374173 42374246 -43064234 + CT-rich Low_complexity Low_complexity 6 77 0 2137 134 0 0 chr17 42374700 42374991 -43063489 - AluSx SINE Alu -20 292 2 548 231 16 0 chr17 42375017 42375138 -43063342 + MER94 DNA DNA 8 130 -4 210 37 0 0 chr17 42375614 42375641 -43062839 + (TG)n Simple_repeat Simple_repeat 1 27 0 348 64 0 0 chr17 42375641 42375688 -43062792 + (GA)n Simple_repeat Simple_repeat 2 48 0 233 265 0 0 chr17 42376361 42376410 -43062070 + MIR SINE MIR 83 131 -131 2407 101 0 3 chr17 42376429 42376737 -43061743 + AluSx SINE Alu 1 307 -5 186 347 27 0 chr17 42377662 42377737 -43060743 - L2 LINE L2 -541 2773 2697 213 39 0 0 chr17 42378934 42378960 -43059520 + (TC)n Simple_repeat Simple_repeat 1 26 0 570 177 27 48 chr17 42379018 42379165 -43059315 - MIR3 SINE MIR -42 166 23 26 50 0 0 chr17 42379557 42379597 -43058883 + GC_rich Low_complexity Low_complexity 1 40 0 383 185 65 46 chr17 42380213 42380321 -43058159 + MIR SINE MIR 35 144 -118 296 275 55 0 chr17 42380667 42380758 -43057722 - MIR3 SINE MIR -21 187 92 25 0 0 0 chr17 42384130 42384155 -43054325 + GC_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr17 42384904 42384926 -43053554 + (TTTCC)n Simple_repeat Simple_repeat 4 25 0 232 256 54 31 chr17 42385096 42385225 -43053255 - L1ME LINE L1 -352 5818 5687 2090 110 17 7 chr17 42385233 42385533 -43052947 - AluSx SINE Alu -9 303 1 317 200 0 31 chr17 42385542 42385607 -43052873 - L1MD2 LINE L1 -1 6358 6296 1433 154 9 0 chr17 42385608 42385828 -43052652 + AluJb SINE Alu 87 308 -4 1615 189 54 104 chr17 42385831 42386206 -43052274 - L1MD2 LINE L1 -71 6288 5945 2397 95 7 0 chr17 42386206 42386502 -43051978 + AluSx SINE Alu 1 298 -14 1615 189 54 104 chr17 42386502 42386646 -43051834 - L1MD2 LINE L1 -414 5945 5795 2152 173 90 2 chr17 42386816 42387239 -43051241 - MLT1C LTR MaLR -5 462 3 1946 125 23 40 chr17 42387272 42387576 -43050904 - AluSx SINE Alu -13 299 1 4309 139 15 52 chr17 42387837 42388504 -43049976 - L1MC1 LINE L1 0 6333 5704 2286 116 0 0 chr17 42388504 42388807 -43049673 - AluSx SINE Alu -9 303 1 4309 139 15 52 chr17 42388807 42389011 -43049469 - L1MC1 LINE L1 -629 5704 5494 219 286 0 0 chr17 42389166 42389215 -43049265 - L3 LINE CR1 -2 1575 1527 230 157 0 39 chr17 42389418 42389469 -43049011 + L1MC/D LINE L1 5781 5829 -1979 29 47 0 0 chr17 42389688 42389731 -43048749 + AT_rich Low_complexity Low_complexity 1 43 0 243 200 0 20 chr17 42390931 42390981 -43047499 - MIR3 SINE MIR -21 187 139 276 299 18 76 chr17 42391718 42391907 -43046573 + MIR SINE MIR 20 196 -66 1317 255 13 30 chr17 42394126 42394498 -43043982 + L1ME LINE L1 5408 5773 -397 2139 124 0 13 chr17 42394621 42394919 -43043561 + AluSg SINE Alu 1 294 -16 1528 75 0 15 chr17 42395003 42395202 -43043278 - AluSq SINE Alu -12 301 106 396 103 0 0 chr17 42395213 42395271 -43043209 + (TG)n Simple_repeat Simple_repeat 2 59 0 281 109 0 45 chr17 42395278 42395295 -43043185 + MLT2B2 LTR ERVL 464 480 -35 1635 159 35 35 chr17 42395295 42395635 -43042845 + MER2 DNA MER2_type 5 344 0 281 109 0 45 chr17 42395635 42395681 -43042799 + MLT2B2 LTR ERVL 480 515 0 373 280 144 0 chr17 42395702 42395834 -43042646 + MIR SINE MIR 102 252 -10 2374 106 0 6 chr17 42395966 42396278 -43042202 + AluSx SINE Alu 1 310 -2 221 283 0 0 chr17 42396305 42396358 -43042122 + L2 LINE L2 3261 3313 0 242 305 51 42 chr17 42396671 42396789 -43041691 + L2 LINE L2 2988 3106 -166 270 322 46 11 chr17 42396912 42396999 -43041481 - L2 LINE L2 0 3313 3224 806 176 0 0 chr17 42397922 42398053 -43040427 + FLAM_A SINE Alu 2 132 -1 2421 66 3 41 chr17 42398057 42398375 -43040105 + AluSp SINE Alu 1 306 -7 336 219 122 101 chr17 42398429 42398667 -43039813 + MLT1L LTR MaLR 324 566 -49 227 281 165 27 chr17 42399275 42399462 -43039018 + L2 LINE L2 2800 3010 -262 783 240 56 5 chr17 42399534 42399730 -43038750 + MIR SINE MIR 6 211 -51 430 252 43 0 chr17 42399788 42399903 -43038577 + L2 LINE L2 3191 3310 -3 2125 101 11 28 chr17 42400071 42400384 -43038096 + AluSx SINE Alu 1 308 0 201 227 27 13 chr17 42400608 42400683 -43037797 - MIR3 SINE MIR -130 78 3 2372 85 3 0 chr17 42401219 42401512 -43036968 - AluSq SINE Alu -19 294 1 218 170 128 0 chr17 42401588 42401635 -43036845 + L2 LINE L2 3218 3270 -2 216 207 52 17 chr17 42401796 42401854 -43036626 + MIR3 SINE MIR 99 158 -50 32 0 0 0 chr17 42402057 42402089 -43036391 + AT_rich Low_complexity Low_complexity 1 32 0 2177 53 0 60 chr17 42402099 42402381 -43036099 + AluSg SINE Alu 3 267 -43 37 93 0 0 chr17 42403226 42403333 -43035147 + GC_rich Low_complexity Low_complexity 1 107 0 327 250 125 27 chr17 42403802 42403914 -43034566 + MIR SINE MIR 137 259 -3 198 275 72 0 chr17 42403909 42403978 -43034502 - L2 LINE L2 -2 3311 3238 * 371 301 90 8 chr17 42404141 42404274 -43034206 + MIR3 SINE MIR 30 173 -35 1987 109 39 7 chr17 42405580 42405864 -43032616 - AluSc SINE Alu -16 293 1 1340 185 122 12 chr17 42406403 42406732 -43031748 - MLT1A1 LTR MaLR 0 365 1 240 345 115 14 chr17 42406770 42406918 -43031562 - L2 LINE L2 -9 3263 3101 356 258 21 10 chr17 42407091 42407188 -43031292 + MER5B DNA MER1_type 1 98 -80 253 211 0 0 chr17 42409203 42409255 -43029225 - MLT2B3 LTR ERVL 0 554 503 206 118 0 0 chr17 42409255 42409289 -43029191 + (GA)n Simple_repeat Simple_repeat 2 35 0 2326 179 47 50 chr17 42409289 42409406 -43029074 - MLT2B3 LTR ERVL -20 534 418 2045 154 74 59 chr17 42409406 42409664 -43028816 - MER66B LTR ERV1 -4 482 212 2549 64 0 3 chr17 42409664 42409962 -43028518 - AluSg SINE Alu -13 297 1 2045 154 74 59 chr17 42409962 42410178 -43028302 - MER66B LTR ERV1 -274 212 1 2326 179 47 50 chr17 42410178 42410596 -43027884 - MLT2B3 LTR ERVL -136 418 1 2306 215 78 12 chr17 42410604 42411190 -43027290 - L1MD2 LINE L1 -10 6743 6119 2318 102 0 0 chr17 42411195 42411506 -43026974 - AluSx SINE Alu 0 311 1 492 269 30 6 chr17 42411509 42411676 -43026804 - L1MD2 LINE L1 -844 5696 5526 1051 104 33 11 chr17 42411676 42411859 -43026621 + L1MD1 LINE L1 6056 6242 0 254 284 34 23 chr17 42411903 42411991 -43026489 + L2 LINE L2 2403 2491 -823 180 97 0 0 chr17 42412009 42412040 -43026440 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2222 228 50 20 chr17 42412283 42412739 -43025741 - L1MD2 LINE L1 -3253 3287 2804 1924 136 0 41 chr17 42412739 42413034 -43025446 - AluJb SINE Alu -14 298 16 2222 228 50 20 chr17 42413034 42413231 -43025249 - L1MD2 LINE L1 -3736 2804 2614 2047 144 0 44 chr17 42413231 42413269 -43025211 + MER47A DNA MER2_type 1 39 -2284 2658 40 0 0 chr17 42413269 42413565 -43024915 - AluY SINE Alu -14 297 2 2047 144 0 44 chr17 42413565 42413909 -43024571 + MER47A DNA MER2_type 39 366 0 307 129 0 43 chr17 42413961 42414031 -43024449 + (TCCCC)n Simple_repeat Simple_repeat 2 68 0 1700 194 85 44 chr17 42414031 42414573 -43023907 - L1MD2 LINE L1 -4461 2079 1516 2925 142 56 53 chr17 42414579 42415130 -43023350 - MER52A LTR ERV1 0 1755 1203 2102 119 18 3 chr17 42415253 42415540 -43022940 + AluSq SINE Alu 1 290 -23 190 0 0 0 chr17 42415540 42415561 -43022919 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 322 260 0 0 chr17 42416053 42416130 -43022350 + MER117 DNA MER1_type 111 187 -10 1229 128 17 6 chr17 42416575 42416754 -43021726 - AluJo SINE Alu -15 297 117 40028 64 8 2 chr17 42416754 42422855 -43015625 - L1PA5 LINE L1 -19 6135 1 2249 125 0 0 chr17 42422872 42423169 -43015311 - AluSx SINE Alu -3 309 13 994 119 22 0 chr17 42423181 42423315 -43015165 - AluJo SINE Alu -175 137 1 2032 87 7 52 chr17 42423639 42423925 -43014555 - AluSx SINE Alu -21 291 19 599 270 53 68 chr17 42424400 42424471 -43014009 + MIR SINE MIR 2 73 -189 1877 159 30 14 chr17 42424471 42424767 -43013713 - AluJb SINE Alu -11 301 1 599 270 53 68 chr17 42424767 42424958 -43013522 + MIR SINE MIR 73 260 -2 457 229 19 9 chr17 42425831 42425936 -43012544 + MIR3 SINE MIR 93 198 -10 423 298 23 47 chr17 42427909 42428080 -43010400 + MER5A DNA MER1_type 7 173 -16 4300 165 68 19 chr17 42428442 42429002 -43009478 + L1MB7 LINE L1 4625 5156 -1028 1970 117 7 11 chr17 42429002 42429283 -43009197 + AluSq SINE Alu 29 308 -5 4300 165 68 19 chr17 42429283 42430203 -43008277 + L1MB7 LINE L1 5156 6175 -9 358 196 52 152 chr17 42430317 42430390 -43008090 - L1ME4a LINE L1 -230 5891 5812 2394 95 0 13 chr17 42430390 42430705 -43007775 - AluSx SINE Alu -1 311 1 358 196 52 152 chr17 42430705 42430848 -43007632 - L1ME4a LINE L1 -309 5812 5697 2231 120 7 0 chr17 42430848 42431147 -43007333 - AluSq SINE Alu -12 301 1 358 196 52 152 chr17 42431147 42431159 -43007321 - L1ME4a LINE L1 -424 5697 5685 2244 110 0 3 chr17 42431208 42431507 -43006973 - AluSx SINE Alu -9 303 6 2029 141 3 35 chr17 42431539 42431858 -43006622 - AluJb SINE Alu -3 309 1 1762 191 0 13 chr17 42431913 42432212 -43006268 + AluJo SINE Alu 1 295 -17 964 135 0 0 chr17 42432212 42432345 -43006135 + FLAM_C SINE Alu 1 133 0 2555 67 0 0 chr17 42433837 42434137 -43004343 + AluY SINE Alu 1 300 -11 532 303 73 23 chr17 42435582 42435800 -43002680 - MIR SINE MIR -32 230 2 2380 97 10 0 chr17 42435822 42436131 -43002349 - AluSp SINE Alu 0 313 2 481 275 147 5 chr17 42436678 42436896 -43001584 + L2 LINE L2 2811 3059 -213 797 272 28 9 chr17 42437434 42437651 -43000829 + MIR SINE MIR 9 229 -33 417 145 0 34 chr17 42438820 42438904 -42999576 + MIR SINE MIR 74 146 -62 316 250 71 20 chr17 42438906 42439291 -42999189 + L1MD3 LINE L1 7634 8034 -7 1995 143 7 13 chr17 42439291 42439591 -42998889 + AluJb SINE Alu 1 298 -14 1328 172 19 42 chr17 42439611 42439872 -42998608 + AluJo SINE Alu 55 309 -3 766 162 0 153 chr17 42441654 42441876 -42996604 - MER53 DNA DNA 0 189 2 2274 81 7 36 chr17 42442882 42443189 -42995291 + AluSx SINE Alu 1 298 -14 186 224 30 60 chr17 42443283 42443350 -42995130 + MER5A DNA MER1_type 11 75 -114 * 539 214 269 0 chr17 42443292 42443437 -42995043 - MER5A DNA MER1_type -5 184 1 272 313 55 37 chr17 42443527 42443690 -42994790 + L1ME LINE L1 5613 5778 -343 297 239 24 138 chr17 42443696 42443863 -42994617 + L2 LINE L2 3032 3179 -93 1900 147 10 13 chr17 42444165 42444487 -42993993 - AluJo SINE Alu 0 312 1 2203 105 35 0 chr17 42444558 42444844 -42993636 + AluSx SINE Alu 1 296 -16 315 0 0 0 chr17 42444845 42444880 -42993600 + (CA)n Simple_repeat Simple_repeat 2 36 0 249 359 33 16 chr17 42446739 42446923 -42991557 + L2 LINE L2 2553 2739 -575 1525 201 83 43 chr17 42447006 42447425 -42991055 + LTR16C LTR ERVL 53 488 -3 242 239 0 0 chr17 42447771 42447817 -42990663 + L2 LINE L2 3244 3289 -24 21 36 0 0 chr17 42448441 42448469 -42990011 + AT_rich Low_complexity Low_complexity 1 28 0 2288 110 10 3 chr17 42449002 42449312 -42989168 - AluSq SINE Alu -1 312 1 360 299 39 8 chr17 42449598 42449726 -42988754 - MIR SINE MIR -69 139 33 422 327 48 8 chr17 42450273 42450425 -42988055 - MIR SINE MIR -43 165 5 454 261 189 7 chr17 42450587 42450740 -42987740 + MER5A DNA MER1_type 9 189 0 1112 172 8 71 chr17 42451070 42451245 -42987235 - AluJo SINE Alu -5 307 149 2416 93 3 3 chr17 42451245 42451555 -42986925 - AluSp SINE Alu -3 310 1 1112 172 8 71 chr17 42451555 42451617 -42986863 - AluJo SINE Alu -163 149 85 315 130 0 0 chr17 42451617 42451663 -42986817 - AluSc SINE Alu -51 248 203 923 145 0 0 chr17 42451663 42451794 -42986686 - AluSq/x SINE Alu -182 131 1 353 200 86 48 chr17 42452285 42452390 -42986090 - MIR SINE MIR -120 142 34 477 278 170 35 chr17 42452654 42452884 -42985596 + MIR SINE MIR 2 262 0 212 150 0 25 chr17 42453135 42453175 -42985305 - MIR SINE MIR -117 145 107 1031 239 28 0 chr17 42453412 42453630 -42984850 - MER58A DNA MER1_type 0 224 1 287 221 65 13 chr17 42453644 42453721 -42984759 + MER91A DNA MER1_type 1 81 -115 666 285 6 17 chr17 42454572 42454751 -42983729 - MIR SINE MIR -54 208 32 391 311 82 16 chr17 42454753 42454875 -42983605 - MIR SINE MIR -119 143 14 344 348 52 0 chr17 42456335 42456490 -42981990 - MIR SINE MIR 0 262 100 204 67 0 0 chr17 42456962 42456992 -42981488 + (CCCCG)n Simple_repeat Simple_repeat 3 32 0 219 203 40 14 chr17 42457134 42457208 -42981272 + (CGGGG)n Simple_repeat Simple_repeat 1 76 0 21 57 0 0 chr17 42457271 42457306 -42981174 + GC_rich Low_complexity Low_complexity 1 35 0 210 210 37 25 chr17 42457448 42457529 -42980951 + G-rich Low_complexity Low_complexity 4 85 0 372 263 59 8 chr17 42457721 42457839 -42980641 - L2 LINE L2 -4 3268 3145 184 375 16 0 chr17 42458119 42458183 -42980297 - MIR SINE MIR -80 182 118 427 158 40 0 chr17 42458569 42458645 -42979835 - MER5A DNA MER1_type -99 90 12 541 290 40 0 chr17 42458765 42458941 -42979539 + L1ME1 LINE L1 4909 5091 -1055 988 164 26 26 chr17 42458941 42459130 -42979350 + AluJo SINE Alu 116 304 -8 312 102 17 0 chr17 42459144 42459203 -42979277 + L1ME1 LINE L1 5127 5186 -960 2264 112 0 13 chr17 42459204 42459508 -42978972 + AluSx SINE Alu 1 300 -12 1254 86 0 0 chr17 42459508 42459660 -42978820 + AluY SINE Alu 1 152 -159 449 108 0 0 chr17 42459660 42459772 -42978708 + AluSg/x SINE Alu 217 328 0 1956 156 0 25 chr17 42459794 42460114 -42978366 + AluJb SINE Alu 1 312 0 858 146 44 24 chr17 42460126 42460366 -42978114 + L1ME1 LINE L1 5188 5433 -731 812 195 70 16 chr17 42460366 42460551 -42977929 - MLT1A1 LTR MaLR 0 365 171 2502 82 0 0 chr17 42460564 42460870 -42977610 + AluY SINE Alu 1 306 -5 332 167 0 107 chr17 42460890 42460974 -42977506 - MLT1A1 LTR MaLR -169 196 122 421 142 13 84 chr17 42460974 42461095 -42977385 + L1ME1 LINE L1 5741 5861 -339 718 331 54 82 chr17 42461099 42461138 -42977342 + L1MC/D LINE L1 4294 4333 -1813 2485 82 0 0 chr17 42461138 42461443 -42977037 + AluSc SINE Alu 1 305 -4 718 331 54 82 chr17 42461443 42461882 -42976598 + L1MC/D LINE L1 4333 4759 -1387 1793 151 11 0 chr17 42461882 42462147 -42976333 + AluJo SINE Alu 23 290 -22 718 331 54 82 chr17 42462147 42462290 -42976190 + L1MC/D LINE L1 4759 4904 -1242 1773 171 7 0 chr17 42462311 42462603 -42975877 + AluJo SINE Alu 1 294 -18 458 136 0 0 chr17 42462663 42462729 -42975751 + AluS SINE Alu 2 67 -246 1170 114 6 0 chr17 42462804 42462971 -42975509 - AluSg/x SINE Alu -11 299 132 333 0 0 0 chr17 42462971 42463008 -42975472 + (TTG)n Simple_repeat Simple_repeat 2 38 0 2538 39 0 0 chr17 42463008 42463290 -42975190 - AluY SINE Alu -29 282 1 434 333 96 11 chr17 42463561 42463822 -42974658 + L1MC/D LINE L1 5344 5626 -495 1218 163 0 0 chr17 42464454 42464644 -42973836 - AluSg/x SINE Alu -3 309 120 346 300 88 59 chr17 42464799 42464969 -42973511 - L1MEd LINE L1 -5359 760 586 908 112 16 0 chr17 42465318 42465443 -42973037 - AluJb SINE Alu -15 297 171 1513 158 0 0 chr17 42465453 42465719 -42972761 - L1MD3 LINE L1 0 7995 7730 2061 86 111 7 chr17 42465879 42466159 -42972321 + AluSx SINE Alu 1 309 -3 456 255 33 18 chr17 42466290 42466454 -42972026 - MLT1J2 LTR MaLR -18 428 273 183 168 42 28 chr17 42466629 42466772 -42971708 + CT-rich Low_complexity Low_complexity 2 146 0 406 182 91 12 chr17 42466791 42466956 -42971524 + (CCTCG)n Simple_repeat Simple_repeat 2 179 0 * 439 224 11 34 chr17 42466835 42467014 -42971466 + CT-rich Low_complexity Low_complexity 2 176 0 297 186 116 0 chr17 42466969 42467098 -42971382 + (CACTC)n Simple_repeat Simple_repeat 3 146 0 * 1212 99 129 0 chr17 42467367 42467568 -42970912 - MER30 DNA MER1_type 0 230 4 1128 165 27 49 chr17 42467642 42467704 -42970776 + MER20 DNA MER1_type 1 63 -156 2556 52 0 16 chr17 42467704 42468011 -42970469 - AluY SINE Alu -9 302 1 1982 157 3 7 chr17 42468011 42468317 -42970163 - AluJb SINE Alu -7 305 1 1128 165 27 49 chr17 42468317 42468477 -42970003 + MER20 DNA MER1_type 61 219 0 233 308 0 0 chr17 42518505 42518583 -42919897 - AluSg SINE Alu -92 210 133 1686 101 12 8 chr17 42518584 42518841 -42919639 - AluY SINE Alu -14 297 40 22 70 0 0 chr17 42519362 42519405 -42919075 + GC_rich Low_complexity Low_complexity 1 43 0 296 280 153 27 chr17 42521430 42521580 -42916900 - MIR SINE MIR -87 175 7 914 48 12 66 chr17 42522771 42522938 -42915542 - AluSg SINE Alu -152 158 1 638 287 40 9 chr17 42522940 42523163 -42915317 - L1ME LINE L1 -633 5533 5304 2184 110 0 0 chr17 42523163 42523455 -42915025 - AluSx SINE Alu -20 292 1 1195 124 0 37 chr17 42523455 42523672 -42914808 - L1PA16 LINE L1 -129 6037 5829 2395 68 0 7 chr17 42523672 42523980 -42914500 - AluY SINE Alu -5 306 1 415 323 42 38 chr17 42524605 42524712 -42913768 + L2 LINE L2 2715 2820 -452 2172 103 3 28 chr17 42524712 42525031 -42913449 + AluSq SINE Alu 1 311 -2 415 323 42 38 chr17 42525031 42525263 -42913217 + L2 LINE L2 2820 3052 -220 2053 66 0 4 chr17 42525409 42525667 -42912813 + AluY SINE Alu 39 295 -16 1118 88 14 0 chr17 42525667 42525845 -42912635 + AluSg/x SINE Alu 132 311 0 1059 67 0 0 chr17 42525846 42525980 -42912500 + AluY SINE Alu 157 290 -21 299 310 58 26 chr17 42526061 42526216 -42912264 + MIR SINE MIR 10 169 -93 933 90 23 0 chr17 42526457 42526590 -42911890 + AluSp/q SINE Alu 157 292 -21 203 152 0 0 chr17 42526661 42526694 -42911786 + (CACCC)n Simple_repeat Simple_repeat 1 33 0 2076 124 10 0 chr17 42526976 42527275 -42911205 - AluSc SINE Alu -7 302 1 1826 154 0 22 chr17 42527275 42527586 -42910894 - AluJo SINE Alu -8 304 1 496 213 28 35 chr17 42527661 42527802 -42910678 + MER58B DNA MER1_type 202 341 0 226 263 0 26 chr17 42528537 42528613 -42909867 - AluSg/x SINE Alu -10 292 219 2218 93 10 0 chr17 42528935 42529236 -42909244 + AluSx SINE Alu 1 304 -8 1931 139 7 3 chr17 42529369 42529663 -42908817 + AluSx SINE Alu 1 295 -17 257 280 178 0 chr17 42530409 42530516 -42907964 - MIR SINE MIR -8 254 129 408 284 21 5 chr17 42530518 42530708 -42907772 - L1MC5 LINE L1 -50 7911 7719 1857 141 0 29 chr17 42532440 42532746 -42905734 - AluJb SINE Alu -2 310 14 25 0 0 0 chr17 42533158 42533183 -42905297 + GC_rich Low_complexity Low_complexity 1 25 0 277 210 10 40 chr17 42533286 42533386 -42905094 + G-rich Low_complexity Low_complexity 6 102 0 198 0 0 0 chr17 42534806 42534828 -42903652 + (CCCCAG)n Simple_repeat Simple_repeat 1 22 0 339 151 0 82 chr17 42535856 42535929 -42902551 + L3 LINE CR1 1395 1461 -116 1472 186 14 7 chr17 42536410 42536701 -42901779 + AluSx SINE Alu 5 297 -5 222 37 0 0 chr17 42536731 42536758 -42901722 + (TG)n Simple_repeat Simple_repeat 2 28 0 2395 73 0 0 chr17 42537184 42537486 -42900994 + AluY SINE Alu 1 302 -9 945 256 97 91 chr17 42537496 42538063 -42900417 + L2 LINE L2 2457 3035 -278 2134 122 3 6 chr17 42538084 42538395 -42900085 + AluSg SINE Alu 1 310 0 1994 153 0 3 chr17 42538434 42538741 -42899739 + AluJb SINE Alu 1 306 -6 773 225 12 12 chr17 42538778 42538947 -42899533 + AluY SINE Alu 118 286 -25 284 250 15 0 chr17 42539275 42539343 -42899137 + MLT1J LTR MaLR 128 196 -315 1240 85 24 0 chr17 42539352 42539516 -42898964 - L1PA11 LINE L1 -2 6172 6005 1822 141 7 20 chr17 42539526 42539830 -42898650 - AluJo SINE Alu 0 312 13 2073 102 10 7 chr17 42539918 42540212 -42898268 - AluSg SINE Alu -15 295 1 257 322 42 17 chr17 42541654 42541772 -42896708 + L3b LINE CR1 1368 1488 -95 272 259 76 38 chr17 42542107 42542238 -42896242 + MIR SINE MIR 44 179 -83 4298 60 69 22 chr17 42542464 42542881 -42895599 - LTR66 LTR ERVL 0 610 157 2166 121 0 3 chr17 42542881 42543194 -42895286 - AluSx SINE Alu 0 312 1 4298 60 69 22 chr17 42543194 42543359 -42895121 - LTR66 LTR ERVL -453 157 1 1645 163 24 27 chr17 42543568 42543693 -42894787 + AluJo SINE Alu 1 125 -187 2301 88 7 0 chr17 42543693 42543998 -42894482 + AluSc SINE Alu 1 307 -2 1645 163 24 27 chr17 42543998 42544167 -42894313 + AluJo SINE Alu 125 294 -18 1879 132 7 30 chr17 42544191 42544562 -42893918 + AluSx SINE Alu 1 312 0 1695 201 28 3 chr17 42544626 42545124 -42893356 + L1MC/D LINE L1 4910 5427 -747 2136 95 14 7 chr17 42545124 42545418 -42893062 - AluSg1 SINE Alu -13 296 1 1618 182 20 10 chr17 42545505 42545807 -42892673 + AluJb SINE Alu 4 308 -4 214 237 0 0 chr17 42546199 42546237 -42892243 + polypurine Low_complexity Low_complexity 4 41 0 187 286 191 38 chr17 42546453 42546558 -42891922 - MIR SINE MIR -61 147 27 414 302 56 0 chr17 42546987 42547113 -42891367 + L2 LINE L2 3139 3271 -1 196 140 18 35 chr17 42547116 42547173 -42891307 + GA-rich Low_complexity Low_complexity 1 56 0 1429 175 21 4 chr17 42547943 42548177 -42890303 - AluJo SINE Alu -74 238 1 2068 85 18 88 chr17 42548196 42548381 -42890099 - AluSg SINE Alu -3 307 111 279 0 0 0 chr17 42548381 42548412 -42890068 + (TA)n Simple_repeat Simple_repeat 2 32 0 2139 103 4 0 chr17 42548412 42548693 -42889787 - AluSc SINE Alu -27 282 1 2068 85 18 88 chr17 42548693 42548836 -42889644 - AluSg SINE Alu -197 113 1 2145 118 43 18 chr17 42548995 42549324 -42889156 - MER1B DNA MER1_type 0 337 1 225 395 23 11 chr17 42549324 42549501 -42888979 - L1ME LINE L1 -365 5799 5621 247 253 93 40 chr17 42549776 42549791 -42888689 - L2 LINE L2 -2 3311 3298 306 0 0 0 chr17 42549791 42549825 -42888655 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 247 253 93 40 chr17 42549825 42549884 -42888596 - L2 LINE L2 -15 3298 3233 224 253 222 30 chr17 42550928 42551027 -42887453 + MIR SINE MIR 16 133 -75 22 0 0 0 chr17 42551032 42551054 -42887426 + AT_rich Low_complexity Low_complexity 1 22 0 834 152 0 36 chr17 42551055 42551193 -42887287 - AluJb SINE Alu -179 133 1 2082 90 7 7 chr17 42551278 42551567 -42886913 - AluSg SINE Alu -16 294 6 314 272 150 14 chr17 42551807 42551954 -42886526 + L2 LINE L2 2926 3092 -180 242 224 0 0 chr17 42552295 42552353 -42886127 + (TAA)n Simple_repeat Simple_repeat 1 58 0 385 260 116 47 chr17 42552419 42552677 -42885803 - MLT1J LTR MaLR -9 502 227 408 284 144 0 chr17 42552682 42552904 -42885576 - MLT1F1 LTR MaLR -5 562 284 260 250 0 0 chr17 42553115 42553155 -42885325 + T-rich Low_complexity Low_complexity 1 40 0 232 268 79 102 chr17 42553717 42553844 -42884636 + L2 LINE L2 3137 3260 -12 2402 90 3 0 chr17 42554274 42554586 -42883894 + AluSp SINE Alu 1 313 0 1671 115 115 21 chr17 42554908 42555187 -42883293 - AluJb SINE Alu -7 305 1 1911 145 0 31 chr17 42558429 42558747 -42879733 - AluJb SINE Alu -4 308 1 306 282 19 70 chr17 42558845 42559001 -42879479 + MIR SINE MIR 30 177 -85 200 300 0 0 chr17 42559794 42559844 -42878636 + MIR SINE MIR 94 143 -119 1691 178 24 0 chr17 42559937 42560229 -42878251 - AluJb SINE Alu -13 299 1 201 298 119 0 chr17 42560240 42560324 -42878156 + MIR3 SINE MIR 67 160 -48 2186 94 33 0 chr17 42560337 42560636 -42877844 - AluSx SINE Alu -3 309 1 514 270 63 26 chr17 42564060 42564249 -42874231 - MIR3 SINE MIR -2 206 11 2364 85 0 3 chr17 42564361 42564668 -42873812 - AluSx SINE Alu -6 306 1 1550 141 9 0 chr17 42564669 42564896 -42873584 - AluSx SINE Alu -30 282 54 365 297 100 42 chr17 42565834 42566093 -42872387 - L2 LINE L2 -181 3091 2818 2139 100 4 0 chr17 42566140 42566445 -42872035 - AluSp SINE Alu 0 307 2 185 364 94 25 chr17 42567082 42567486 -42870994 - L2 LINE L2 -2306 1008 577 532 261 0 8 chr17 42567844 42567978 -42870502 + FLAM_A SINE Alu 1 133 0 631 146 9 9 chr17 42568014 42568124 -42870356 + L2 LINE L2 3204 3313 0 1852 173 7 7 chr17 42568237 42568543 -42869937 + AluJb SINE Alu 6 311 -1 1781 185 18 3 chr17 42568695 42568981 -42869499 - AluJo SINE Alu -22 290 1 2223 85 15 88 chr17 42569000 42569185 -42869295 - AluSg SINE Alu -3 307 110 261 0 0 0 chr17 42569185 42569214 -42869266 + (TA)n Simple_repeat Simple_repeat 2 30 0 2326 99 0 0 chr17 42569214 42569496 -42868984 - AluSc SINE Alu -27 282 1 2223 85 15 88 chr17 42569496 42569640 -42868840 - AluSg SINE Alu -198 112 1 2004 121 39 18 chr17 42569799 42570129 -42868351 - MER1B DNA MER1_type 0 337 1 227 395 23 11 chr17 42570129 42570306 -42868174 - L1ME LINE L1 -365 5799 5621 236 253 93 40 chr17 42570581 42570596 -42867884 - L2 LINE L2 -2 3311 3298 306 0 0 0 chr17 42570596 42570630 -42867850 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 236 253 93 40 chr17 42570630 42570689 -42867791 - L2 LINE L2 -15 3298 3233 230 244 47 35 chr17 42571063 42571149 -42867331 + MLT1H LTR MaLR 18 104 -445 227 253 222 30 chr17 42571734 42571833 -42866647 + MIR SINE MIR 16 133 -75 22 0 0 0 chr17 42571838 42571860 -42866620 + AT_rich Low_complexity Low_complexity 1 22 0 871 152 0 36 chr17 42571861 42571999 -42866481 - AluJb SINE Alu -179 133 1 2317 69 31 10 chr17 42572084 42572374 -42866106 - AluSx SINE Alu -16 296 1 510 282 167 51 chr17 42572582 42572972 -42865508 - MLT1H LTR MaLR 0 549 115 2534 67 0 0 chr17 42573502 42573800 -42864680 + AluY SINE Alu 1 298 -13 2344 94 7 0 chr17 42573945 42574244 -42864236 + AluSx SINE Alu 1 301 -11 2022 139 7 3 chr17 42574379 42574673 -42863807 + AluSx SINE Alu 1 295 -17 263 231 218 0 chr17 42575422 42575500 -42862980 - MIR SINE MIR -8 254 160 544 244 39 50 chr17 42575531 42575789 -42862691 - L1MC5 LINE L1 -50 7911 7657 30 0 0 0 chr17 42575811 42575841 -42862639 + AT_rich Low_complexity Low_complexity 1 30 0 650 107 146 0 chr17 42575841 42575944 -42862536 - FLAM_C SINE Alu -15 118 1 1943 246 48 42 chr17 42575949 42576210 -42862270 + L1MC4a LINE L1 4901 5159 -1412 1516 170 0 96 chr17 42576210 42576533 -42861947 - AluJo SINE Alu -20 292 1 1943 246 48 42 chr17 42576533 42577190 -42861290 + L1MC4a LINE L1 5159 5824 -747 645 92 0 0 chr17 42577220 42577307 -42861173 + AluSg/x SINE Alu 201 287 -23 235 203 0 210 chr17 42577327 42577465 -42861015 + L1MC4a LINE L1 5823 5931 -1877 2107 123 10 0 chr17 42577474 42577774 -42860706 - AluSx SINE Alu -9 303 1 747 88 0 0 chr17 42577774 42577876 -42860604 - L1PB2 LINE L1 -59 6092 5991 1825 230 139 32 chr17 42577921 42578459 -42860021 + L1MC4a LINE L1 6409 7045 -763 2329 105 0 7 chr17 42578459 42578765 -42859715 - AluSq SINE Alu -9 304 1 1825 230 139 32 chr17 42578765 42578943 -42859537 + L1MC4a LINE L1 7045 7202 -606 1121 238 22 73 chr17 42578954 42579085 -42859395 + L1MC4 LINE L1 7436 7572 -470 774 172 8 0 chr17 42579085 42579213 -42859267 + FLAM_C SINE Alu 1 129 -4 1121 238 22 73 chr17 42579213 42579573 -42858907 + L1MC4 LINE L1 7572 7902 -140 193 299 339 8 chr17 42579778 42579905 -42858575 + MIR3 SINE MIR 22 190 -18 192 277 143 17 chr17 42584477 42584596 -42853884 - MIR3 SINE MIR -71 137 4 321 317 233 0 chr17 42585239 42585419 -42853061 + MIR SINE MIR 22 243 -19 282 116 0 0 chr17 42586918 42586961 -42851519 + (TG)n Simple_repeat Simple_repeat 2 44 0 2079 136 58 0 chr17 42588442 42588787 -42849693 + L1P4 LINE L1 5329 5693 -473 235 175 0 0 chr17 42588787 42588827 -42849653 - LTR3b LTR ERVK -63 437 398 2580 94 85 14 chr17 42588827 42589240 -42849240 - LTR3b LTR ERVK -58 442 1 1737 168 31 16 chr17 42589278 42589748 -42848732 - HERVK14 LTR ERVK -366 5579 2995 * 5598 167 19 2 chr17 42589747 42590715 -42847765 - HERVK14 LTR ERVK -4934 2309 1326 492 254 0 26 chr17 42590707 42590821 -42847659 - HERVK14 LTR ERVK -6561 682 572 * 1086 160 30 5 chr17 42590872 42591072 -42847408 - HERVK14 LTR ERVK -6971 272 68 2417 139 36 10 chr17 42591184 42591602 -42846878 - LTR3 LTR ERVK 0 429 1 2590 122 14 75 chr17 42591603 42591744 -42846736 + L1PA16 LINE L1 5688 5836 -330 2368 96 0 19 chr17 42591744 42592058 -42846422 + AluSx SINE Alu 1 308 -4 2590 122 14 75 chr17 42592058 42592275 -42846205 + L1PA16 LINE L1 5836 6010 -156 2381 82 0 0 chr17 42592275 42592583 -42845897 + AluSx SINE Alu 1 308 0 2590 122 14 75 chr17 42592583 42592730 -42845750 + L1PA16 LINE L1 6010 6164 -2 280 269 39 0 chr17 42592797 42592875 -42845605 + MIR SINE MIR 61 141 -67 477 226 29 0 chr17 42593421 42593523 -42844957 + MER5B DNA MER1_type 1 105 -73 240 349 121 0 chr17 42593536 42593668 -42844812 - MLT1J2 LTR MaLR -34 416 269 2267 102 0 35 chr17 42593668 42593983 -42844497 - AluSg SINE Alu -6 304 1 1940 165 3 3 chr17 42594037 42594340 -42844140 - AluJo SINE Alu -9 303 1 3212 176 34 14 chr17 42594341 42594408 -42844072 + MER54A LTR ERVL 20 84 -817 2268 132 3 0 chr17 42594408 42594718 -42843762 - AluSx SINE Alu -1 311 1 3212 176 34 14 chr17 42594718 42595343 -42843137 + MER54A LTR ERVL 84 901 0 667 206 7 14 chr17 42595351 42595492 -42842988 + MLT1A1 LTR MaLR 225 364 -1 2770 181 72 112 chr17 42595492 42596822 -42841658 + L1ME LINE L1 4495 5762 -404 693 201 1 55 chr17 42596820 42596989 -42841491 + L1MA10 LINE L1 5983 6301 -33 * 2387 87 3 0 chr17 42596989 42597288 -42841192 - AluSq SINE Alu -13 300 1 693 201 1 55 chr17 42597288 42597318 -42841162 + L1MA10 LINE L1 6301 6331 -3 2131 112 25 3 chr17 42598080 42598366 -42840114 + AluSx SINE Alu 7 298 -14 1047 290 54 30 chr17 42599416 42599546 -42838934 + L1ME4a LINE L1 5535 5660 -461 2167 134 13 0 chr17 42599546 42599852 -42838628 + AluSx SINE Alu 1 310 -2 1047 290 54 30 chr17 42599852 42600280 -42838200 + L1ME4a LINE L1 5660 6106 -15 2140 125 30 10 chr17 42600297 42600602 -42837878 + AluSx SINE Alu 1 311 -1 317 264 88 25 chr17 42601055 42601214 -42837266 - MER5A DNA MER1_type 0 189 21 280 227 2 0 chr17 42602668 42602728 -42835752 + MIR SINE MIR 93 146 -62 373 296 24 8 chr17 42603306 42603431 -42835049 - MIR SINE MIR -134 128 2 837 165 0 0 chr17 42603582 42603703 -42834777 + FLAM_C SINE Alu 3 123 -20 500 288 112 0 chr17 42604527 42604697 -42833783 + MIR SINE MIR 60 248 -14 477 233 25 8 chr17 42605829 42605949 -42832531 + MIR SINE MIR 20 141 -67 197 179 164 15 chr17 42605981 42606048 -42832432 - MER5A DNA MER1_type -63 126 50 229 164 14 123 chr17 42606082 42606155 -42832325 + MIR3 SINE MIR 138 202 -6 409 216 39 10 chr17 42606826 42606928 -42831552 - MER5A DNA MER1_type -77 112 8 524 243 127 28 chr17 42607103 42607284 -42831196 + MIR SINE MIR 59 257 -5 765 212 127 14 chr17 42607295 42607507 -42830973 + MER33 DNA MER1_type 1 236 -88 1154 144 0 0 chr17 42607513 42607686 -42830794 + FRAM SINE Alu 4 176 0 394 200 0 0 chr17 42607686 42607781 -42830699 + MER33 DNA MER1_type 261 355 -8 425 221 0 0 chr17 42607796 42607882 -42830598 - MIR SINE MIR -131 131 46 644 274 167 0 chr17 42608606 42608810 -42829670 + MIR SINE MIR 23 260 -2 308 325 178 0 chr17 42609376 42609539 -42828941 + MER91A DNA MER1_type 1 192 -4 310 295 71 0 chr17 42610362 42610474 -42828006 + MIR SINE MIR 21 140 -122 2282 103 3 28 chr17 42611102 42611421 -42827059 + AluSq SINE Alu 1 311 -2 372 330 43 0 chr17 42611444 42611653 -42826827 + L2 LINE L2 2835 3052 -220 576 40 6 5 chr17 42611799 42611974 -42826506 + AluY SINE Alu 39 306 -5 1121 149 112 14 chr17 42612139 42612354 -42826126 - MER46A DNA MER2_type 0 236 1 307 255 31 43 chr17 42612371 42612453 -42826027 - L1M4 LINE L1 -1897 4249 4168 2454 85 0 3 chr17 42612453 42612760 -42825720 - AluSg1 SINE Alu -1 308 3 307 255 31 43 chr17 42612760 42612838 -42825642 - L1M4 LINE L1 -1978 4168 4091 1625 200 3 28 chr17 42612839 42613133 -42825347 + AluJb SINE Alu 1 288 -24 285 29 0 0 chr17 42613133 42613167 -42825313 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 1625 200 3 28 chr17 42613167 42613192 -42825288 + AluJb SINE Alu 288 312 0 447 183 134 94 chr17 42613256 42613458 -42825022 - MER63A DNA MER1_type 0 210 1 525 227 17 8 chr17 42613864 42613983 -42824497 + MIR SINE MIR 41 160 -102 199 221 118 0 chr17 42614464 42614532 -42823948 + MIR SINE MIR 22 97 -165 2123 116 0 0 chr17 42615339 42615654 -42822826 - AluY SINE Alu 0 311 3 1057 160 94 0 chr17 42615654 42615815 -42822665 - AluJb SINE Alu -16 296 115 261 0 0 0 chr17 42615815 42615844 -42822636 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1057 160 94 0 chr17 42615844 42615863 -42822617 - AluJb SINE Alu -197 115 99 1160 241 126 20 chr17 42616660 42617104 -42821376 + Charlie4a DNA MER1_type 2 492 -16 371 264 26 77 chr17 42617420 42617575 -42820905 - L1ME4a LINE L1 0 6121 5975 226 185 74 0 chr17 42617687 42617741 -42820739 + MER20B DNA MER1_type 64 121 -662 2319 104 3 3 chr17 42617863 42618161 -42820319 + AluSp SINE Alu 1 298 -15 1918 142 10 7 chr17 42618164 42618466 -42820014 - AluJo SINE Alu -9 303 1 802 254 12 12 chr17 42618585 42618829 -42819651 + MER20B DNA MER1_type 509 752 -31 1128 165 27 49 chr17 42619379 42619539 -42818941 - MER20B DNA MER1_type 0 219 57 1982 157 3 7 chr17 42619539 42619845 -42818635 + AluJb SINE Alu 1 305 -7 2556 52 0 16 chr17 42619845 42620152 -42818328 + AluY SINE Alu 1 302 -9 1128 165 27 49 chr17 42620152 42620214 -42818266 - MER20B DNA MER1_type -160 59 1 1212 99 129 0 chr17 42620288 42620489 -42817991 + MER30 DNA MER1_type 4 230 0 254 187 112 0 chr17 42620758 42620865 -42817615 + (GAGTG)n Simple_repeat Simple_repeat 3 121 0 * 439 202 23 31 chr17 42620820 42621205 -42817275 + GA-rich Low_complexity Low_complexity 1 381 0 456 255 33 18 chr17 42621380 42621544 -42816936 + MLT1J2 LTR MaLR 273 391 -18 1969 115 63 21 chr17 42622998 42623285 -42815195 + AluSx SINE Alu 1 299 -13 522 255 47 47 chr17 42623520 42623669 -42814811 + L2 LINE L2 1083 1231 -2083 954 195 6 23 chr17 42623670 42623844 -42814636 + AluJb SINE Alu 136 306 -6 1861 257 115 53 chr17 42623860 42624062 -42814418 + L2 LINE L2 1471 1659 -1655 2272 85 0 73 chr17 42624062 42624391 -42814089 - AluSq SINE Alu -8 305 1 1861 257 115 53 chr17 42624391 42625113 -42813367 + L2 LINE L2 1659 2452 -862 965 149 0 88 chr17 42625116 42625266 -42813214 + AluJb SINE Alu 133 266 -46 2035 164 3 3 chr17 42625266 42625577 -42812903 - AluSx SINE Alu -1 311 1 965 149 0 88 chr17 42625577 42625607 -42812873 + AluJb SINE Alu 266 297 -15 2264 120 0 0 chr17 42625617 42625916 -42812564 + AluSx SINE Alu 4 302 -10 916 256 97 91 chr17 42625926 42626493 -42811987 + L2 LINE L2 2457 3035 -278 2252 119 3 6 chr17 42626514 42626825 -42811655 + AluSg SINE Alu 1 310 0 2073 145 0 16 chr17 42626864 42627181 -42811299 + AluJb SINE Alu 1 312 0 1072 177 6 0 chr17 42627207 42627382 -42811098 + AluY SINE Alu 118 293 -18 690 281 137 40 chr17 42627382 42627827 -42810653 - MLT1G LTR MaLR -30 537 50 910 128 8 8 chr17 42627843 42627976 -42810504 - FLAM_C SINE Alu -5 138 6 2345 99 30 0 chr17 42627997 42628301 -42810179 - AluSq SINE Alu 0 313 1 310 236 42 0 chr17 42628307 42628379 -42810101 - MLT1G LTR MaLR -496 99 25 944 59 76 0 chr17 42628379 42628498 -42809982 + AluSg/x SINE Alu 158 285 -27 210 37 0 0 chr17 42628501 42628528 -42809952 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 190 176 0 39 chr17 42629521 42629572 -42808908 - L2 LINE L2 -553 2761 2713 30 36 0 18 chr17 42629671 42629699 -42808781 + AT_rich Low_complexity Low_complexity 1 29 -25 1853 183 0 0 chr17 42629699 42630000 -42808480 + AluJb SINE Alu 1 301 -11 30 36 0 18 chr17 42630000 42630026 -42808454 + AT_rich Low_complexity Low_complexity 29 54 0 1850 149 0 48 chr17 42630214 42630376 -42808104 - AluJb SINE Alu -17 295 154 2444 74 3 0 chr17 42630376 42630674 -42807806 - AluY SINE Alu -12 299 1 1850 149 0 48 chr17 42630674 42630820 -42807660 - AluJb SINE Alu -158 154 2 525 173 26 1 chr17 42630843 42630948 -42807532 - MLT1B LTR MaLR 0 390 296 1480 119 10 0 chr17 42631046 42631116 -42807364 - AluSq SINE Alu -110 203 135 2325 84 19 7 chr17 42631116 42631424 -42807056 - AluSp SINE Alu -1 312 1 1480 119 10 0 chr17 42631424 42631554 -42806926 - AluSq SINE Alu -178 135 1 265 297 19 45 chr17 42631555 42631710 -42806770 - L1ME LINE L1 -356 5765 5615 2429 69 7 7 chr17 42631710 42632014 -42806466 - AluY SINE Alu -7 304 1 1350 138 49 0 chr17 42632014 42632217 -42806263 - AluJb SINE Alu -13 299 87 2142 136 0 3 chr17 42632403 42632705 -42805775 - AluSq SINE Alu -12 301 1 597 216 42 42 chr17 42632707 42632770 -42805710 - L1ME4a LINE L1 -199 5922 5860 2328 52 45 7 chr17 42632770 42633061 -42805419 + AluY SINE Alu 1 302 -9 597 216 42 42 chr17 42633061 42633233 -42805247 - L1ME4a LINE L1 -260 5861 5687 358 22 0 0 chr17 42633256 42633302 -42805178 - MADE1 DNA Mariner 0 80 35 392 276 13 101 chr17 42633308 42633384 -42805096 - L1ME4a LINE L1 -479 5642 5561 2478 91 0 3 chr17 42633384 42633693 -42804787 - AluSx SINE Alu 0 312 5 392 276 13 101 chr17 42633693 42633842 -42804638 - L1ME4a LINE L1 -560 5561 5435 513 0 0 0 chr17 42633952 42634009 -42804471 + (TA)n Simple_repeat Simple_repeat 2 58 0 1067 143 0 23 chr17 42634013 42634188 -42804292 - FRAM SINE Alu 0 176 6 749 133 209 0 chr17 42634270 42634428 -42804052 + L1M3 LINE L1 5414 5604 -567 2493 53 0 0 chr17 42634445 42634760 -42803720 - AluY SINE Alu 0 315 1 2335 122 3 0 chr17 42634791 42635102 -42803378 + AluSx SINE Alu 1 312 0 414 277 44 78 chr17 42635990 42636196 -42802284 + L2 LINE L2 3073 3271 -1 622 271 90 5 chr17 42636800 42636988 -42801492 + MIR SINE MIR 33 236 -26 384 324 92 7 chr17 42637198 42637340 -42801140 - MIR SINE MIR -79 183 30 2283 101 3 23 chr17 42637570 42637878 -42800602 - AluSq SINE Alu -11 302 1 428 251 117 68 chr17 42637923 42638249 -42800231 - L1ME4a LINE L1 -177 5944 5603 1585 157 11 39 chr17 42638375 42638661 -42799819 + AluJo SINE Alu 35 312 0 316 377 74 19 chr17 42638670 42638885 -42799595 - L1ME4a LINE L1 -840 5306 5080 363 331 51 26 chr17 42639199 42639374 -42799106 + MIR SINE MIR 9 188 -61 2248 121 7 0 chr17 42640579 42640903 -42797577 - AluSx SINE Alu 0 326 1 227 258 11 97 chr17 42641325 42641418 -42797062 - MER91C DNA MER1_type 0 140 56 2842 213 35 95 chr17 42641873 42642065 -42796415 + L1ME3A LINE L1 5180 5382 -788 2367 94 13 0 chr17 42642065 42642364 -42796116 + AluSg SINE Alu 1 303 -7 2842 213 35 95 chr17 42642364 42642685 -42795795 + L1ME3A LINE L1 5382 5721 -449 734 136 14 64 chr17 42642685 42642825 -42795655 + FLAM_C SINE Alu 1 133 0 2842 213 35 95 chr17 42642825 42643081 -42795399 + L1ME3A LINE L1 5721 5991 -179 2104 115 4 0 chr17 42643081 42643388 -42795092 + AluSg SINE Alu 1 308 0 2539 85 0 0 chr17 42643391 42643696 -42794784 + AluSx SINE Alu 3 307 -5 2842 213 35 95 chr17 42643696 42643958 -42794522 + L1ME3A LINE L1 5993 6170 0 848 184 14 0 chr17 42644159 42644300 -42794180 - AluJb SINE Alu -12 300 158 623 283 120 30 chr17 42644453 42644517 -42793963 - MLT1J LTR MaLR -2 509 452 897 221 0 31 chr17 42644517 42644712 -42793768 - MER5A DNA MER1_type 0 189 1 623 283 120 30 chr17 42644712 42644947 -42793533 - MLT1J LTR MaLR -59 452 183 802 179 0 8 chr17 42645345 42645479 -42793001 - FLAM_C SINE Alu 0 133 1 500 161 32 8 chr17 42645504 42645628 -42792852 + CT-rich Low_complexity Low_complexity 2 128 0 1736 170 40 0 chr17 42645635 42645935 -42792545 - AluJo SINE Alu 0 312 1 195 42 0 0 chr17 42646652 42646676 -42791804 + (TCTCCC)n Simple_repeat Simple_repeat 6 29 0 2430 103 0 0 chr17 42647051 42647363 -42791117 - AluSx SINE Alu 0 312 1 346 250 0 24 chr17 42647368 42647452 -42791028 + L1MC4 LINE L1 1995 2076 -4350 * 356 344 0 0 chr17 42647410 42647500 -42790980 - L1MC4 LINE L1 -1339 6703 6614 * 378 281 17 0 chr17 42647421 42647529 -42790951 + L1MC4 LINE L1 1996 6983 -1339 261 261 0 22 chr17 42647560 42647652 -42790828 + L1MC4 LINE L1 6614 6703 -1339 350 347 0 0 chr17 42647652 42647770 -42790710 + L1MC4 LINE L1 6614 6703 -1339 242 329 6 0 chr17 42647770 42647934 -42790546 + (CATATA)n Simple_repeat Simple_repeat 6 170 0 296 313 0 11 chr17 42647938 42648114 -42790366 + (TATATG)n Simple_repeat Simple_repeat 5 178 0 490 239 91 40 chr17 42648114 42648126 -42790354 - MIR SINE MIR -58 204 194 1553 178 73 7 chr17 42648126 42648280 -42790200 - AluJb SINE Alu -19 293 151 194 0 0 37 chr17 42648280 42648307 -42790173 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1553 178 73 7 chr17 42648307 42648427 -42790053 - AluJb SINE Alu -161 151 1 490 239 91 40 chr17 42648427 42648590 -42789890 - MIR SINE MIR -68 194 20 465 386 78 7 chr17 42648643 42648938 -42789542 + L3 LINE CR1 338 653 -924 334 211 105 21 chr17 42648956 42649051 -42789429 - L1ME4a LINE L1 -1 6120 6018 401 346 48 17 chr17 42649217 42649448 -42789032 - MIR SINE MIR -15 247 10 4022 62 69 22 chr17 42649611 42650028 -42788452 - LTR66 LTR ERVL 0 610 157 2269 121 0 3 chr17 42650028 42650341 -42788139 - AluSx SINE Alu 0 312 1 4022 62 69 22 chr17 42650341 42650506 -42787974 - LTR66 LTR ERVL -453 157 1 1696 167 24 27 chr17 42650715 42650840 -42787640 + AluJo SINE Alu 1 125 -187 2409 88 7 0 chr17 42650840 42651145 -42787335 + AluSc SINE Alu 1 307 -2 1696 167 24 27 chr17 42651145 42651313 -42787167 + AluJo SINE Alu 125 293 -19 1974 130 7 14 chr17 42651337 42651688 -42786792 + AluSx SINE Alu 1 349 0 263 253 0 13 chr17 42651691 42651766 -42786714 - L1ME1 LINE L1 -23 6143 6070 2819 214 66 18 chr17 42651768 42652266 -42786214 + L1MD2 LINE L1 4910 5383 -976 2241 130 0 0 chr17 42652266 42652565 -42785915 - AluSx SINE Alu -13 299 1 2819 214 66 18 chr17 42652565 42653199 -42785281 + L1MD2 LINE L1 5383 6104 -255 538 233 0 0 chr17 42653197 42653326 -42785154 - L1M4 LINE L1 -1251 4895 4767 * 1997 153 3 0 chr17 42653333 42653627 -42784853 - AluSx SINE Alu -17 295 1 1632 179 16 47 chr17 42653627 42653811 -42784669 - AluJo SINE Alu -4 308 137 2242 103 3 3 chr17 42653811 42654103 -42784377 + AluSg SINE Alu 1 292 -18 1632 179 16 47 chr17 42654103 42654236 -42784244 - AluJo SINE Alu -175 137 1 1241 201 102 43 chr17 42654249 42654313 -42784167 - L1M4 LINE L1 -2191 3955 3896 2393 98 3 3 chr17 42654313 42654619 -42783861 - AluSx SINE Alu -6 306 1 1241 201 102 43 chr17 42654619 42654732 -42783748 - L1M4 LINE L1 -2250 3896 3791 2171 132 0 0 chr17 42654732 42655027 -42783453 - AluSx SINE Alu -17 295 1 2200 135 0 0 chr17 42655027 42655323 -42783157 - AluSx SINE Alu -15 297 1 1241 201 102 43 chr17 42655323 42655516 -42782964 - L1M4 LINE L1 -2354 3792 3561 439 156 44 0 chr17 42655659 42655749 -42782731 - AluJ/FLAM SINE Alu -217 95 2 629 243 95 0 chr17 42656213 42656382 -42782098 - MIR SINE MIR -64 198 14 2338 115 0 0 chr17 42656528 42656832 -42781648 - AluSx SINE Alu -8 304 1 197 176 0 39 chr17 42656900 42656951 -42781529 + (TATG)n Simple_repeat Simple_repeat 4 52 0 849 248 26 13 chr17 42656993 42657227 -42781253 - L2 LINE L2 0 3313 3077 474 275 75 6 chr17 42657566 42657726 -42780754 + MIR SINE MIR 92 262 0 183 383 142 0 chr17 42657733 42657973 -42780507 - L2 LINE L2 -962 2352 2079 2330 116 7 0 chr17 42658035 42658345 -42780135 - AluSx SINE Alu 0 312 1 2296 114 0 0 chr17 42658357 42658654 -42779826 - AluSx SINE Alu -15 297 1 258 122 0 0 chr17 42658654 42658732 -42779748 + L1MA9 LINE L1 6264 6341 0 308 240 27 0 chr17 42658733 42658808 -42779672 - L1MC5 LINE L1 -1252 6709 6633 1190 71 0 0 chr17 42659034 42659175 -42779305 - AluSp/q SINE Alu -15 298 158 1696 74 5 0 chr17 42659181 42659384 -42779096 - AluSp SINE Alu -109 204 1 416 250 188 6 chr17 42659388 42659564 -42778916 - HAL1b LINE L1 -620 728 521 288 166 0 118 chr17 42659571 42659812 -42778668 + AluJo SINE Alu 40 302 0 1494 140 15 143 chr17 42659834 42660169 -42778311 - AluJb SINE Alu -20 292 1 718 81 15 37 chr17 42660178 42660314 -42778166 + (TTTC)n Simple_repeat Simple_repeat 4 136 0 2361 120 0 0 chr17 42660319 42660627 -42777853 - AluSx SINE Alu -4 308 1 1082 113 99 5 chr17 42661322 42661543 -42776937 + L1MA9 LINE L1 6070 6311 -1 912 274 47 0 chr17 42661590 42661824 -42776656 - MLT1J LTR MaLR -260 251 7 2253 79 62 3 chr17 42662029 42662319 -42776161 + AluSx SINE Alu 1 307 -5 452 263 82 107 chr17 42662341 42662424 -42776056 + MLT1J LTR MaLR 122 206 -305 1193 74 31 0 chr17 42662424 42662587 -42775893 - L1PA11 LINE L1 -2 6172 6005 1909 134 7 26 chr17 42662596 42662901 -42775579 - AluJo SINE Alu -1 311 13 452 263 82 107 chr17 42662901 42662989 -42775491 + MLT1J LTR MaLR 214 303 -208 2261 98 7 7 chr17 42662989 42663285 -42775195 - AluSx SINE Alu -16 296 1 2181 104 40 3 chr17 42663294 42663592 -42774888 - AluSq SINE Alu -4 309 1 452 263 82 107 chr17 42663592 42663753 -42774727 + MLT1J LTR MaLR 311 466 -45 2207 133 10 0 chr17 42664141 42664450 -42774030 - AluSx SINE Alu 0 312 1 259 164 254 0 chr17 42665104 42665171 -42773309 + MER58B DNA MER1_type 1 84 -257 2318 106 10 0 chr17 42665173 42665466 -42773014 + AluSx SINE Alu 1 296 -16 418 208 0 0 chr17 42665476 42665548 -42772932 + AluJ/FLAM SINE Alu 2 73 -239 800 214 46 82 chr17 42665559 42665840 -42772640 + MER58B DNA MER1_type 71 341 0 280 176 59 82 chr17 42666046 42666131 -42772349 - AluJ/FLAM SINE Alu -226 76 2 753 194 61 28 chr17 42666131 42666162 -42772318 + L2 LINE L2 3122 3151 -162 2159 110 4 0 chr17 42666162 42666477 -42772003 - AluSx SINE Alu 0 316 1 753 194 61 28 chr17 42666477 42666624 -42771856 + L2 LINE L2 3151 3307 -6 2329 97 10 0 chr17 42666636 42666934 -42771546 - AluSg SINE Alu -9 301 1 257 322 42 17 chr17 42668377 42668495 -42769985 + L3b LINE CR1 1368 1488 -95 321 251 200 29 chr17 42668830 42669005 -42769475 + MIR SINE MIR 44 248 -14 245 240 83 21 chr17 42670171 42670267 -42768213 - MIR SINE MIR -113 149 48 192 289 79 59 chr17 42671963 42672115 -42766365 + L2 LINE L2 3032 3186 -86 2125 112 7 3 chr17 42672302 42672607 -42765873 - AluSq SINE Alu -5 308 3 314 272 150 14 chr17 42672846 42672993 -42765487 + L2 LINE L2 2926 3092 -180 242 224 0 0 chr17 42673334 42673392 -42765088 + (TAA)n Simple_repeat Simple_repeat 1 58 0 365 264 102 43 chr17 42673458 42673712 -42764768 - MLT1J LTR MaLR -9 502 234 938 218 252 68 chr17 42673721 42674084 -42764396 - MLT1H1 LTR MaLR -3 552 140 1648 140 201 64 chr17 42674084 42674359 -42764121 - MLT1C LTR MaLR -4 463 113 2291 85 0 0 chr17 42674359 42674654 -42763826 - AluSg SINE Alu -14 296 2 1648 140 201 64 chr17 42674654 42674785 -42763695 - MLT1C LTR MaLR -354 113 1 938 218 252 68 chr17 42674785 42674957 -42763523 - MLT1H1 LTR MaLR -415 140 1 343 275 106 7 chr17 42674961 42675103 -42763377 - MLT1J LTR MaLR -284 227 72 28 0 0 0 chr17 42675111 42675139 -42763341 + AT_rich Low_complexity Low_complexity 1 28 0 2216 91 3 3 chr17 42675142 42675439 -42763041 - AluSq SINE Alu -16 297 1 240 340 58 0 chr17 42675569 42675672 -42762808 - MIR3 SINE MIR -40 168 60 1578 113 0 5 chr17 42675942 42676163 -42762317 - AluSq SINE Alu -18 295 76 338 304 61 15 chr17 42676631 42676797 -42761683 + MIR SINE MIR 16 182 -61 200 308 108 9 chr17 42676816 42676928 -42761552 + MIR SINE MIR 22 145 -63 1213 189 155 15 chr17 42676935 42677200 -42761280 + AluJo SINE Alu 1 302 0 3432 133 12 50 chr17 42677699 42677825 -42760655 - MER41B LTR ERV1 0 635 506 546 183 183 0 chr17 42677825 42677929 -42760551 + FLAM_C SINE Alu 1 123 -10 3432 133 12 50 chr17 42677929 42678222 -42760258 - MER41B LTR ERV1 -129 506 248 669 226 0 29 chr17 42678222 42678359 -42760121 + FLAM_A SINE Alu 1 133 0 3432 133 12 50 chr17 42678359 42678598 -42759882 - MER41B LTR ERV1 -387 248 1 2180 126 18 52 chr17 42678645 42678989 -42759491 + THE1C LTR MaLR 1 332 -43 2319 87 0 10 chr17 42678989 42679300 -42759180 - AluSx SINE Alu -4 308 1 2180 126 18 52 chr17 42679300 42679343 -42759137 + THE1C LTR MaLR 332 375 0 450 225 17 42 chr17 42679970 42680090 -42758390 - MIR SINE MIR -118 144 28 336 262 0 12 chr17 42680384 42680468 -42758012 + MIR SINE MIR 78 160 -102 242 286 0 51 chr17 42680490 42680599 -42757881 + MIR SINE MIR 41 145 -63 198 0 0 0 chr17 42682466 42682488 -42755992 + (CCCCAG)n Simple_repeat Simple_repeat 1 22 0 339 151 0 82 chr17 42683508 42683581 -42754899 + L3 LINE CR1 1395 1461 -116 2001 145 7 0 chr17 42684076 42684373 -42754107 - AluJo SINE Alu -13 299 1 22 35 0 0 chr17 42685380 42685409 -42753071 + GC_rich Low_complexity Low_complexity 1 29 0 210 91 0 0 chr17 42685412 42685445 -42753035 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 2329 88 0 0 chr17 42685873 42686180 -42752300 + AluSx SINE Alu 6 312 0 374 276 190 9 chr17 42686250 42686471 -42752009 + L2 LINE L2 2814 3074 -239 884 110 0 28 chr17 42686475 42686620 -42751860 + FLAM_C SINE Alu 1 141 -2 431 264 46 100 chr17 42686620 42686685 -42751795 + L2 LINE L2 3065 3132 -181 1729 190 7 0 chr17 42686685 42686995 -42751485 - AluJo SINE Alu 0 312 1 431 264 46 100 chr17 42686995 42687190 -42751290 + L2 LINE L2 3132 3311 -2 534 323 39 20 chr17 42688343 42688574 -42749906 + MIR SINE MIR 18 251 -11 2161 110 0 0 chr17 42688611 42688902 -42749578 - AluSg SINE Alu -19 291 1 1830 163 13 10 chr17 42688986 42689293 -42749187 + AluJb SINE Alu 1 308 -4 205 243 0 0 chr17 42689686 42689723 -42748757 + polypurine Low_complexity Low_complexity 1 37 0 187 286 191 38 chr17 42689942 42690047 -42748433 - MIR SINE MIR -61 147 27 414 302 56 0 chr17 42690476 42690602 -42747878 + L2 LINE L2 3139 3271 -1 196 140 18 35 chr17 42690605 42690662 -42747818 + GA-rich Low_complexity Low_complexity 1 56 0 2005 154 0 0 chr17 42691569 42691880 -42746600 + AluJo SINE Alu 1 311 -1 1773 75 115 12 chr17 42691920 42692208 -42746272 - AluSc SINE Alu 0 314 1 2150 121 3 0 chr17 42693083 42693388 -42745092 - AluSx SINE Alu -6 306 1 353 175 0 16 chr17 42693530 42693593 -42744887 + AluJb SINE Alu 104 165 -137 3125 122 22 19 chr17 42693593 42694134 -42744346 + LTR46-int LTR ERV1 6443 6985 0 3354 81 6 75 chr17 42694134 42694286 -42744194 + LTR46 LTR ERV1 1 162 -298 2228 118 0 9 chr17 42694286 42694601 -42743879 + AluSx SINE Alu 1 312 0 3354 81 6 75 chr17 42694601 42694942 -42743538 + LTR46 LTR ERV1 162 460 0 923 157 39 11 chr17 42694942 42695120 -42743360 + Tigger3(Golem) DNA MER2_type 2847 3029 0 26 30 0 0 chr17 42695322 42695355 -42743125 + AT_rich Low_complexity Low_complexity 1 33 0 2488 59 0 0 chr17 42697153 42697458 -42741022 + AluY SINE Alu 1 305 -6 397 225 39 85 chr17 42701279 42701408 -42737072 + L1ME3 LINE L1 5840 5962 -208 1605 169 83 0 chr17 42701438 42701716 -42736764 - AluJo SINE Alu -11 301 1 2062 105 0 11 chr17 42701721 42702051 -42736429 - AluSx SINE Alu 0 327 1 232 239 0 87 chr17 42702075 42702167 -42736313 + L1ME3 LINE L1 5954 6037 -125 4619 125 22 44 chr17 42702477 42703279 -42735201 - LTR1 LTR ERV1 0 785 1 300 200 0 0 chr17 42703307 42703362 -42735118 - HUERS-P2 LTR ERV1 0 3088 3034 1866 107 64 55 chr17 42703362 42703689 -42734791 + L1PA14 LINE L1 5832 6161 0 2381 69 0 13 chr17 42703696 42704000 -42734480 + AluY SINE Alu 1 300 -11 243 265 0 0 chr17 42704030 42704098 -42734382 + A-rich Low_complexity Low_complexity 1 68 0 414 176 14 0 chr17 42704111 42704185 -42734295 - MER21B LTR ERV1 -776 87 13 260 224 0 15 chr17 42704210 42704277 -42734203 - LTR33A LTR ERVL -15 508 443 204 338 15 0 chr17 42704874 42704942 -42733538 - L2 LINE L2 -2885 429 361 1876 125 40 26 chr17 42704944 42705248 -42733232 - AluSx SINE Alu -4 308 1 813 161 8 0 chr17 42705420 42705550 -42732930 - FLAM_C SINE Alu 0 133 3 225 265 108 0 chr17 42706019 42706121 -42732359 + MLT1J LTR MaLR 377 489 -22 443 257 7 7 chr17 42706392 42706528 -42731952 - MLT1H LTR MaLR -319 230 95 2529 126 38 72 chr17 42706860 42707490 -42730990 - MER4B LTR ERV1 0 779 1 1318 144 93 57 chr17 42707784 42708117 -42730363 - LTR8A LTR ERV1 0 727 383 322 270 0 0 chr17 42708559 42708633 -42729847 - MER5B DNA MER1_type -14 164 91 646 204 0 29 chr17 42708659 42708796 -42729684 + FLAM_A SINE Alu 1 133 0 342 306 46 9 chr17 42708796 42708904 -42729576 - L2 LINE L2 -22 3250 3139 200 193 68 102 chr17 42709032 42709120 -42729360 - MIR3 SINE MIR -30 178 94 462 268 0 0 chr17 42709529 42709626 -42728854 + MIR SINE MIR 66 162 -100 372 226 69 10 chr17 42709650 42709752 -42728728 + MIR SINE MIR 28 135 -127 196 350 146 0 chr17 42710286 42710409 -42728071 - MIR SINE MIR -41 221 81 716 208 4 4 chr17 42710523 42711098 -42727382 + (TG)n Simple_repeat Simple_repeat 1 575 0 756 133 9 9 chr17 42711443 42711586 -42726894 - FLAM_A SINE Alu 0 146 4 498 227 25 8 chr17 42712024 42712143 -42726337 - MIR SINE MIR -110 152 32 410 163 54 0 chr17 42712501 42712593 -42725887 + Charlie7 DNA MER1_type 1 97 -2515 1840 155 0 14 chr17 42712606 42712896 -42725584 + AluJb SINE Alu 1 286 -26 28 29 0 0 chr17 42712900 42712935 -42725545 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr17 42713003 42713026 -42725454 + AT_rich Low_complexity Low_complexity 1 23 0 2167 108 0 0 chr17 42713044 42713340 -42725140 - AluSx SINE Alu -16 296 1 261 0 0 0 chr17 42713344 42713373 -42725107 + (T)n Simple_repeat Simple_repeat 1 29 0 182 246 127 118 chr17 42713947 42714057 -42724423 + L2 LINE L2 3191 3301 -12 2402 90 3 0 chr17 42714487 42714799 -42723681 + AluSp SINE Alu 1 313 0 1656 118 115 21 chr17 42715121 42715400 -42723080 - AluJb SINE Alu -7 305 1 1960 145 0 25 chr17 42718642 42718959 -42719521 - AluJb SINE Alu -3 309 1 302 274 26 45 chr17 42719057 42719213 -42719267 + MIR SINE MIR 30 134 -74 187 283 0 0 chr17 42720006 42720052 -42718428 + MIR SINE MIR 94 139 -123 1676 175 24 0 chr17 42720149 42720441 -42718039 - AluJb SINE Alu -13 299 1 197 298 119 0 chr17 42720452 42720536 -42717944 + MIR3 SINE MIR 67 160 -48 2172 93 33 0 chr17 42720549 42720849 -42717631 - AluSx SINE Alu -2 310 1 509 245 68 18 chr17 42724273 42724436 -42714044 - MIR3 SINE MIR -2 206 36 2366 86 0 3 chr17 42724576 42724889 -42713591 - AluSx SINE Alu 0 312 1 1520 141 9 0 chr17 42724890 42725117 -42713363 - AluSx SINE Alu -30 282 54 366 284 127 20 chr17 42726037 42726234 -42712246 - L2 LINE L2 -181 3091 2874 2111 100 4 0 chr17 42726347 42726652 -42711828 - AluSp SINE Alu 0 307 2 585 261 0 8 chr17 42728051 42728185 -42710295 + FLAM_A SINE Alu 1 133 0 626 146 9 9 chr17 42728221 42728331 -42710149 + L2 LINE L2 3204 3313 0 1731 174 7 0 chr17 42728452 42728750 -42709730 + AluJb SINE Alu 12 311 -1 1602 177 17 31 chr17 42728902 42729196 -42709284 - AluJo SINE Alu -22 290 1 2044 80 15 109 chr17 42729215 42729407 -42709073 - AluSg SINE Alu -4 306 97 243 0 0 0 chr17 42729407 42729434 -42709046 + (TA)n Simple_repeat Simple_repeat 1 27 0 2187 99 0 0 chr17 42729434 42729716 -42708764 - AluSc SINE Alu -27 282 1 2044 80 15 109 chr17 42729716 42729860 -42708620 - AluSg SINE Alu -211 99 1 2171 118 39 18 chr17 42730019 42730349 -42708131 - MER1B DNA MER1_type 0 337 1 248 395 23 11 chr17 42730349 42730526 -42707954 - L1ME LINE L1 -365 5799 5621 238 253 93 40 chr17 42730801 42730816 -42707664 - L2 LINE L2 -2 3311 3298 486 0 0 0 chr17 42730816 42730870 -42707610 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 238 253 93 40 chr17 42730870 42730929 -42707551 - L2 LINE L2 -15 3298 3233 232 244 47 35 chr17 42731303 42731389 -42707091 + MLT1H LTR MaLR 18 104 -445 225 253 222 30 chr17 42731974 42732073 -42706407 + MIR SINE MIR 16 133 -75 22 0 0 0 chr17 42732078 42732100 -42706380 + AT_rich Low_complexity Low_complexity 1 22 0 833 145 0 36 chr17 42732101 42732239 -42706241 - AluJb SINE Alu -179 133 1 2181 79 17 10 chr17 42732324 42732616 -42705864 - AluSx SINE Alu -16 296 3 577 291 164 46 chr17 42732822 42733211 -42705269 - MLT1H LTR MaLR 0 549 115 2470 65 0 0 chr17 42733741 42734047 -42704433 + AluY SINE Alu 1 306 -5 2214 96 7 0 chr17 42734192 42734494 -42703986 + AluSx SINE Alu 1 304 -8 1902 139 7 3 chr17 42734627 42734921 -42703559 + AluSx SINE Alu 1 295 -17 265 231 218 0 chr17 42735670 42735748 -42702732 - MIR SINE MIR -8 254 160 567 244 39 50 chr17 42735779 42736037 -42702443 - L1MC5 LINE L1 -50 7911 7657 30 0 0 0 chr17 42736060 42736090 -42702390 + AT_rich Low_complexity Low_complexity 1 30 0 686 107 146 0 chr17 42736090 42736193 -42702287 - FLAM_C SINE Alu -15 118 1 1942 249 46 41 chr17 42736198 42736459 -42702021 + L1MC4a LINE L1 4901 5159 -1408 1379 173 0 96 chr17 42736459 42736782 -42701698 - AluJo SINE Alu -20 292 1 1942 249 46 41 chr17 42736782 42737440 -42701040 + L1MC4a LINE L1 5159 5824 -743 680 148 0 0 chr17 42737470 42737578 -42700902 + AluSg/x SINE Alu 201 308 -2 226 204 0 212 chr17 42737578 42737715 -42700765 + L1MC4a LINE L1 5824 5931 -1877 2019 117 10 0 chr17 42737724 42738024 -42700456 - AluSx SINE Alu -9 303 1 746 88 0 0 chr17 42738024 42738126 -42700354 - L1PB2 LINE L1 -59 6092 5991 1831 228 143 34 chr17 42738171 42738709 -42699771 + L1MC4a LINE L1 6409 7046 -762 2191 105 0 7 chr17 42738709 42739015 -42699465 - AluSq SINE Alu -9 304 1 1831 228 143 34 chr17 42739015 42739192 -42699288 + L1MC4a LINE L1 7046 7202 -606 394 256 39 8 chr17 42739203 42739332 -42699148 + L1MC4 LINE L1 7436 7568 -474 809 183 7 0 chr17 42739334 42739476 -42699004 + FLAM_C SINE Alu 1 143 0 854 259 20 26 chr17 42739478 42739822 -42698658 + L1MC4 LINE L1 7561 7902 -140 202 299 339 8 chr17 42740027 42740154 -42698326 + MIR3 SINE MIR 22 190 -18 210 277 143 17 chr17 42744726 42744845 -42693635 - MIR3 SINE MIR -71 137 4 327 317 233 0 chr17 42745488 42745668 -42692812 + MIR SINE MIR 22 243 -19 297 128 0 0 chr17 42747167 42747214 -42691266 + (TG)n Simple_repeat Simple_repeat 2 48 0 2081 136 58 0 chr17 42748695 42749040 -42689440 + L1P4 LINE L1 5329 5693 -473 250 171 0 0 chr17 42749040 42749081 -42689399 - LTR3b LTR ERVK -63 437 397 2432 130 69 15 chr17 42749085 42749492 -42688988 - LTR3 LTR ERVK 0 429 1 1762 165 31 16 chr17 42749531 42750001 -42688479 - HERVK14 LTR ERVK -366 5579 2995 * 5654 166 19 2 chr17 42750000 42750968 -42687512 - HERVK14 LTR ERVK -4934 2309 1326 504 254 0 26 chr17 42750960 42751074 -42687406 - HERVK14 LTR ERVK -6561 682 572 * 1102 160 30 5 chr17 42751125 42751325 -42687155 - HERVK14 LTR ERVK -6971 272 68 2633 139 36 10 chr17 42751437 42751855 -42686625 - LTR3 LTR ERVK 0 429 1 2765 123 14 80 chr17 42751856 42752000 -42686480 + L1PA16 LINE L1 5688 5840 -326 2081 92 0 20 chr17 42752000 42752292 -42686188 + AluSx SINE Alu 22 307 -5 2765 123 14 80 chr17 42752292 42752509 -42685971 + L1PA16 LINE L1 5840 6009 -157 2226 85 0 0 chr17 42752509 42752812 -42685668 + AluSx SINE Alu 1 303 0 2765 123 14 80 chr17 42752812 42752958 -42685522 + L1PA16 LINE L1 6009 6163 -3 287 276 41 10 chr17 42752998 42753103 -42685377 + MIR SINE MIR 35 141 -67 483 226 29 0 chr17 42753649 42753751 -42684729 + MER5B DNA MER1_type 1 105 -73 246 340 142 0 chr17 42753752 42753893 -42684587 - MLT1J2 LTR MaLR -18 432 272 2180 101 0 32 chr17 42753894 42754210 -42684270 - AluSg SINE Alu -4 306 1 1820 165 3 3 chr17 42754264 42754567 -42683913 - AluJo SINE Alu -9 303 1 3270 173 34 14 chr17 42754568 42754633 -42683847 + MER54A LTR ERVL 20 82 -819 2144 132 3 0 chr17 42754633 42754944 -42683536 - AluSx SINE Alu 0 312 1 3270 173 34 14 chr17 42754944 42755569 -42682911 + MER54A LTR ERVL 82 901 0 676 206 7 14 chr17 42755577 42755718 -42682762 + MLT1A1 LTR MaLR 225 364 -1 2658 180 72 120 chr17 42755718 42757060 -42681420 + L1ME LINE L1 4495 5762 -404 689 201 1 55 chr17 42757058 42757227 -42681253 + L1MA10 LINE L1 5983 6301 -33 * 2250 87 3 0 chr17 42757227 42757526 -42680954 - AluSq SINE Alu -13 300 1 689 201 1 55 chr17 42757526 42757556 -42680924 + L1MA10 LINE L1 6301 6331 -3 1970 119 25 3 chr17 42758317 42758603 -42679877 + AluSx SINE Alu 7 298 -14 1102 289 59 32 chr17 42759653 42759783 -42678697 + L1ME4a LINE L1 5535 5660 -461 2042 136 13 0 chr17 42759783 42760091 -42678389 + AluSx SINE Alu 1 312 0 1102 289 59 32 chr17 42760091 42760517 -42677963 + L1ME4a LINE L1 5660 6106 -15 2008 125 30 10 chr17 42760534 42760839 -42677641 + AluSx SINE Alu 1 311 -1 335 264 88 25 chr17 42761292 42761451 -42677029 - MER5A DNA MER1_type 0 189 21 282 227 2 0 chr17 42762905 42762965 -42675515 + MIR SINE MIR 93 146 -62 398 305 17 58 chr17 42763494 42763668 -42674812 - MIR SINE MIR -94 168 2 568 291 81 6 chr17 42763799 42763971 -42674509 - MER91A DNA MER1_type 0 196 12 191 200 0 0 chr17 42764549 42764584 -42673896 + L3 LINE CR1 1531 1565 -12 518 297 185 5 chr17 42770191 42770386 -42668094 + MIR SINE MIR 2 231 -31 246 32 0 0 chr17 42773545 42773576 -42664904 + (T)n Simple_repeat Simple_repeat 1 31 0 263 211 19 0 chr17 42773911 42773963 -42664517 + L2 LINE L2 3226 3278 -35 183 191 143 0 chr17 42773935 42773977 -42664503 + MIR SINE MIR 206 253 -9 * 2247 96 0 3 chr17 42774699 42775002 -42663478 - AluSg SINE Alu -8 302 1 321 94 82 118 chr17 42775054 42775079 -42663401 - MIR SINE MIR -142 120 96 1672 168 17 24 chr17 42775079 42775370 -42663110 + AluJo SINE Alu 3 291 -21 321 94 82 118 chr17 42775370 42775429 -42663051 - MIR SINE MIR -166 96 39 1961 67 104 4 chr17 42775465 42775735 -42662745 + AluSp SINE Alu 1 297 -16 639 314 6 0 chr17 42775739 42775908 -42662572 - MER91A DNA MER1_type -26 170 1 420 278 48 80 chr17 42776275 42776462 -42662018 - MER5A DNA MER1_type 0 189 9 530 302 50 6 chr17 42777231 42777413 -42661067 + MIR3 SINE MIR 16 205 -3 407 182 0 116 chr17 42777981 42777996 -42660484 + Charlie4 DNA MER1_type 1851 1866 -95 2037 102 58 0 chr17 42777996 42778290 -42660190 - AluSx SINE Alu -1 311 1 407 182 0 116 chr17 42778290 42778321 -42660159 + Charlie4 DNA MER1_type 1866 1899 -62 2363 82 3 0 chr17 42778321 42778624 -42659856 + AluSq SINE Alu 1 304 -9 407 182 0 116 chr17 42778624 42778697 -42659783 + Charlie4 DNA MER1_type 1899 1957 -4 350 330 94 5 chr17 42778733 42778936 -42659544 - MIR SINE MIR -36 226 6 1913 108 16 26 chr17 42779362 42779667 -42658813 + AluSc SINE Alu 1 302 -7 2124 99 3 10 chr17 42779670 42779964 -42658516 + AluSc SINE Alu 1 292 -17 260 154 115 0 chr17 42779968 42780020 -42658460 - MIR SINE MIR -107 101 44 705 327 0 20 chr17 42780025 42780224 -42658256 - MER91A DNA MER1_type -1 195 1 489 302 28 39 chr17 42780552 42780734 -42657746 + MIR3 SINE MIR 18 197 -11 2271 80 6 26 chr17 42780894 42781206 -42657274 - AluY SINE Alu -5 306 1 24 0 0 0 chr17 42781217 42781241 -42657239 + AT_rich Low_complexity Low_complexity 1 24 0 2386 67 0 7 chr17 42781241 42781541 -42656939 + AluSc SINE Alu 1 298 -11 2104 93 0 54 chr17 42781560 42781873 -42656607 - AluSg SINE Alu -14 296 1 21 0 0 0 chr17 42781873 42781894 -42656586 + AT_rich Low_complexity Low_complexity 1 21 0 2514 62 0 0 chr17 42782552 42782858 -42655622 + AluY SINE Alu 1 306 -5 2121 104 3 0 chr17 42783181 42783469 -42655011 - AluSp SINE Alu -2 311 23 2151 118 0 7 chr17 42783567 42783871 -42654609 - AluSx SINE Alu -10 302 1 1831 79 0 0 chr17 42785307 42785536 -42652944 + AluSq SINE Alu 1 229 -84 2300 100 0 7 chr17 42785553 42785863 -42652617 + AluSq SINE Alu 1 308 -5 251 378 0 0 chr17 42786514 42786625 -42651855 + C-rich Low_complexity Low_complexity 2 112 0 520 246 138 15 chr17 42787019 42787222 -42651258 + MIR SINE MIR 9 236 -26 1629 151 44 4 chr17 42787236 42787507 -42650973 + AluJo SINE Alu 1 282 -30 247 232 49 24 chr17 42787509 42787591 -42650889 + L1MC4 LINE L1 6620 6703 -1339 2216 91 0 7 chr17 42787672 42787969 -42650511 - AluSc SINE Alu -14 295 1 2016 132 6 10 chr17 42787975 42788286 -42650194 - AluSx SINE Alu -2 310 1 230 231 0 0 chr17 42788608 42788673 -42649807 + (CAG)n Simple_repeat Simple_repeat 3 67 0 287 179 0 43 chr17 42788835 42788975 -42649505 + (CAG)n Simple_repeat Simple_repeat 3 136 0 417 182 101 63 chr17 42791259 42791335 -42647145 - Charlie5 DNA MER1_type 0 2624 2552 2391 68 0 7 chr17 42791335 42791642 -42646838 + AluY SINE Alu 1 305 -6 2141 102 7 0 chr17 42791650 42791944 -42646536 + AluSq SINE Alu 1 296 -17 417 182 101 63 chr17 42791944 42792017 -42646463 - Charlie5 DNA MER1_type -78 2546 2460 816 100 7 113 chr17 42792032 42792081 -42646399 - AluJo SINE Alu -178 134 81 2206 97 0 0 chr17 42792081 42792369 -42646111 - AluSx SINE Alu -20 292 5 2067 118 0 38 chr17 42792373 42792551 -42645929 - AluSx SINE Alu -9 303 141 2309 99 0 6 chr17 42792551 42792864 -42645616 - AluSq SINE Alu -2 311 1 2067 118 0 38 chr17 42792864 42793000 -42645480 - AluSx SINE Alu -171 141 1 816 100 7 113 chr17 42793000 42793095 -42645385 - AluJo SINE Alu -234 78 1 531 270 45 0 chr17 42793102 42793258 -42645222 - MER33 DNA MER1_type -272 52 1 224 191 0 44 chr17 42793864 42793932 -42644548 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1942 97 48 14 chr17 42794026 42794316 -42644164 + AluSq SINE Alu 1 300 -13 1205 99 0 0 chr17 42794316 42794478 -42644002 + AluSg/x SINE Alu 134 295 -17 270 95 0 0 chr17 42794788 42794830 -42643650 + (GGA)n Simple_repeat Simple_repeat 1 42 0 203 264 0 0 chr17 42795173 42795226 -42643254 + (TG)n Simple_repeat Simple_repeat 2 54 0 197 65 32 0 chr17 42795320 42795351 -42643129 + (CCCCCG)n Simple_repeat Simple_repeat 3 34 0 1802 116 12 78 chr17 42796385 42796525 -42641955 + AluJo SINE Alu 1 149 -163 2303 81 20 0 chr17 42796525 42796820 -42641660 + AluSx SINE Alu 1 301 -11 1802 116 12 78 chr17 42796820 42796999 -42641481 + AluJo SINE Alu 149 299 -13 1676 112 8 4 chr17 42798191 42798432 -42640048 - AluSx SINE Alu -18 294 53 1934 162 26 0 chr17 42799055 42799357 -42639123 + AluJb SINE Alu 1 310 -2 287 295 42 0 chr17 42800175 42800270 -42638210 - MIR SINE MIR -154 108 10 2022 143 0 9 chr17 42800444 42800759 -42637721 + AluSx SINE Alu 1 312 0 2401 75 0 10 chr17 42800773 42801078 -42637402 + AluSq SINE Alu 1 302 -11 530 147 63 21 chr17 42801279 42801374 -42637106 - AluJ/FLAM SINE Alu -213 99 1 481 302 33 66 chr17 42802513 42802657 -42635823 - L1MEc LINE L1 -4081 2315 2179 2472 71 0 0 chr17 42802657 42802967 -42635513 - AluSg SINE Alu 0 310 1 481 302 33 66 chr17 42802967 42803034 -42635446 - L1MEc LINE L1 -4217 2179 2111 787 176 0 0 chr17 42808433 42808564 -42629916 + AluJo/FLAM SINE Alu 1 131 -171 1812 174 6 3 chr17 42808566 42808877 -42629603 + AluJb SINE Alu 1 312 0 2158 116 3 0 chr17 42809391 42809701 -42628779 + AluSx SINE Alu 2 312 0 2309 83 0 0 chr17 42809706 42810006 -42628474 + AluSx SINE Alu 11 310 -2 537 205 134 82 chr17 42810469 42810640 -42627840 - MER5A DNA MER1_type 0 189 10 191 347 14 0 chr17 42810652 42810724 -42627756 + L2 LINE L2 3200 3272 0 240 312 68 22 chr17 42810820 42810944 -42627536 - MER5A DNA MER1_type -47 140 1 201 139 0 0 chr17 42811835 42811878 -42626602 + (A)n Simple_repeat Simple_repeat 1 43 0 2352 84 0 0 chr17 42812391 42812700 -42625780 + AluSg SINE Alu 2 310 0 1979 127 3 17 chr17 42812703 42813003 -42625477 + AluSp SINE Alu 2 297 -16 2355 68 0 0 chr17 42813111 42813403 -42625077 - AluY SINE Alu -17 294 3 397 247 104 32 chr17 42813529 42813683 -42624797 + L2 LINE L2 2897 3061 -211 2103 109 3 13 chr17 42813803 42814105 -42624375 + AluSx SINE Alu 1 299 -13 265 244 200 0 chr17 42814600 42814690 -42623790 - MIR SINE MIR -6 256 149 224 296 228 6 chr17 42814692 42814854 -42623626 + MIR SINE MIR 3 200 -62 282 284 69 17 chr17 42814861 42814977 -42623503 - MIR SINE MIR -130 132 11 2351 91 0 0 chr17 42814996 42815304 -42623176 - AluSx SINE Alu -4 308 1 206 284 10 69 chr17 42815312 42815414 -42623066 + MIR SINE MIR 88 183 -79 204 114 0 29 chr17 42815690 42815725 -42622755 + (CCG)n Simple_repeat Simple_repeat 3 36 0 2152 88 7 26 chr17 42816860 42817167 -42621313 - AluSc SINE Alu -8 301 1 2185 101 0 3 chr17 42817167 42817464 -42621016 - AluY SINE Alu -8 303 7 2191 99 0 0 chr17 42817571 42817864 -42620616 - AluSx SINE Alu -12 300 8 235 271 71 0 chr17 42817950 42818020 -42620460 + MIR SINE MIR 72 146 -116 21 0 0 0 chr17 42818600 42818621 -42619859 + AT_rich Low_complexity Low_complexity 1 21 0 704 195 0 0 chr17 42819091 42819204 -42619276 - FLAM_A SINE Alu -18 115 3 1119 119 17 6 chr17 42819243 42819420 -42619060 - AluSg/x SINE Alu -22 288 110 1258 186 115 11 chr17 42819446 42819715 -42618765 - AluSg SINE Alu -13 297 1 353 314 43 70 chr17 42819774 42819959 -42618521 + L2 LINE L2 2924 3103 -210 438 208 21 0 chr17 42819964 42820060 -42618420 + MER94 DNA DNA 1 98 -36 2501 46 0 3 chr17 42820076 42820381 -42618099 - AluY SINE Alu -7 304 1 352 301 135 0 chr17 42820382 42820515 -42617965 + L2 LINE L2 3161 3311 -2 2523 67 3 0 chr17 42820985 42821283 -42617197 - AluSp SINE Alu -13 300 2 2592 58 0 3 chr17 42822127 42822437 -42616043 - AluY SINE Alu -2 309 1 1562 115 0 14 chr17 42822804 42823013 -42615467 - AluSq SINE Alu -107 206 1 231 36 0 0 chr17 42823112 42823140 -42615340 + (TG)n Simple_repeat Simple_repeat 2 29 0 817 174 26 45 chr17 42823144 42823299 -42615181 - FRAM SINE Alu -23 153 2 1516 168 27 24 chr17 42823303 42823469 -42615011 - AluJo SINE Alu -14 298 129 2320 86 0 17 chr17 42823469 42823770 -42614710 - AluSg SINE Alu -14 296 1 1516 168 27 24 chr17 42823770 42823900 -42614580 - AluJo SINE Alu -183 129 1 2479 55 0 3 chr17 42824045 42824366 -42614114 - AluY SINE Alu 0 320 1 308 154 0 0 chr17 42824474 42824526 -42613954 - MER6 DNA MER2_type 0 865 814 2103 127 0 0 chr17 42824528 42824841 -42613639 - AluSg1 SINE Alu 0 314 2 978 176 4 57 chr17 42824844 42824876 -42613604 - AluSg/x SINE Alu -13 297 265 2520 64 3 0 chr17 42824876 42825174 -42613306 + AluY SINE Alu 3 301 -10 978 176 4 57 chr17 42825174 42825312 -42613168 - AluSg/x SINE Alu -45 265 139 2147 112 24 0 chr17 42825312 42825606 -42612874 - AluSp SINE Alu -12 301 1 978 176 4 57 chr17 42825606 42825661 -42612819 - AluSg/x SINE Alu -171 139 83 787 139 0 0 chr17 42825661 42825769 -42612711 - AluSc SINE Alu -61 248 141 1124 173 0 78 chr17 42825769 42826000 -42612480 - AluJb SINE Alu -99 213 1 2275 71 0 84 chr17 42826009 42826332 -42612148 - AluSp SINE Alu -13 300 5 360 70 70 0 chr17 42826558 42826644 -42611836 + (TA)n Simple_repeat Simple_repeat 1 92 0 1913 124 7 50 chr17 42826644 42826942 -42611538 - AluJb SINE Alu -27 285 1 2244 102 3 43 chr17 42827172 42827495 -42610985 + AluSg SINE Alu 1 310 0 1779 166 24 3 chr17 42827720 42828010 -42610470 + AluJb SINE Alu 5 300 -12 1158 203 32 0 chr17 42828926 42829143 -42609337 - MER58A DNA MER1_type 0 224 1 25 0 0 0 chr17 42829403 42829428 -42609052 + AT_rich Low_complexity Low_complexity 1 25 0 239 216 34 0 chr17 42829466 42829554 -42608926 + (TA)n Simple_repeat Simple_repeat 1 91 0 2368 89 0 0 chr17 42829554 42829845 -42608635 - AluSq SINE Alu -22 291 1 839 195 105 35 chr17 42829847 42830047 -42608433 - AluJo SINE Alu -18 294 81 1233 170 156 41 chr17 42830065 42830200 -42608280 - AluJo SINE Alu -1 301 183 2121 128 7 10 chr17 42830200 42830496 -42607984 - AluSx SINE Alu -17 295 1 1233 170 156 41 chr17 42830496 42830630 -42607850 - AluJo SINE Alu -119 183 1 1717 144 48 15 chr17 42830769 42830905 -42607575 - AluSc SINE Alu -30 279 149 2115 89 53 0 chr17 42830905 42831186 -42607294 - AluSg SINE Alu -14 296 1 1717 144 48 15 chr17 42831186 42831319 -42607161 - AluSc SINE Alu -160 149 1 703 163 59 30 chr17 42831320 42831455 -42607025 - AluJb SINE Alu -170 142 4 2235 103 0 26 chr17 42831492 42831794 -42606686 + AluSx SINE Alu 3 296 -16 2225 109 0 32 chr17 42831903 42832216 -42606264 + AluSq SINE Alu 3 305 -8 1910 163 3 0 chr17 42832737 42833044 -42605436 + AluJo SINE Alu 5 312 0 2050 130 17 7 chr17 42833078 42833403 -42605077 - AluSx SINE Alu 0 312 1 2156 139 0 0 chr17 42833810 42834111 -42604369 - AluSx SINE Alu -11 301 1 610 112 0 0 chr17 42834139 42834237 -42604243 + L1MD3 LINE L1 5185 5282 -864 384 22 0 0 chr17 42834243 42834288 -42604192 + (TG)n Simple_repeat Simple_repeat 2 46 0 618 170 10 0 chr17 42834304 42834404 -42604076 - AluJ/FLAM SINE Alu -210 102 2 1045 218 36 147 chr17 42834405 42834426 -42604054 + L1MD3 LINE L1 5273 5295 -871 1562 180 3 63 chr17 42834426 42834742 -42603738 + AluJo SINE Alu 3 299 -13 1045 218 36 147 chr17 42834742 42834760 -42603720 + L1MD3 LINE L1 5295 5313 -853 2321 103 0 0 chr17 42834760 42835050 -42603430 + AluSx SINE Alu 1 290 -22 1045 218 36 147 chr17 42835050 42835277 -42603203 + L1MD3 LINE L1 5313 5564 -602 2176 70 59 3 chr17 42835277 42835563 -42602917 + AluSq SINE Alu 1 302 -11 1045 218 36 147 chr17 42835563 42835578 -42602902 + L1MD3 LINE L1 5564 5579 -587 2496 60 0 10 chr17 42835578 42835880 -42602600 - AluY SINE Alu -12 299 1 1045 218 36 147 chr17 42835880 42836071 -42602409 + L1MD3 LINE L1 5579 5790 -376 2615 52 3 0 chr17 42836071 42836376 -42602104 + AluY SINE Alu 1 306 -5 1045 218 36 147 chr17 42836376 42836434 -42602046 + L1MD3 LINE L1 5790 5418 -748 1867 178 0 7 chr17 42836434 42836738 -42601742 + AluJb SINE Alu 1 302 -10 1045 218 36 147 chr17 42836738 42836976 -42601504 + L1MD3 LINE L1 5417 5680 -486 2468 78 0 0 chr17 42836981 42837274 -42601206 + AluSg SINE Alu 1 293 -17 897 112 8 15 chr17 42838485 42838619 -42599861 - FLAM_C SINE Alu 0 133 1 594 93 23 0 chr17 42838677 42838763 -42599717 + AluSg/x SINE Alu 214 301 -8 2333 88 0 14 chr17 42839304 42839440 -42599040 + AluSq SINE Alu 1 137 -176 2359 60 0 57 chr17 42839440 42839754 -42598726 + AluY SINE Alu 1 296 -15 2333 88 0 14 chr17 42839754 42839914 -42598566 + AluSq SINE Alu 137 293 -20 2371 92 0 0 chr17 42840024 42840316 -42598164 - AluSx SINE Alu -20 292 1 570 15 0 0 chr17 42840969 42841036 -42597444 + (TG)n Simple_repeat Simple_repeat 2 68 0 1669 118 4 13 chr17 42841036 42841273 -42597207 - AluSx SINE Alu -24 288 54 2021 87 11 42 chr17 42841306 42841623 -42596857 - AluSg1 SINE Alu 0 308 1 258 271 252 37 chr17 42841644 42841862 -42596618 + L2 LINE L2 3048 3312 -1 324 279 63 18 chr17 42842350 42842461 -42596019 + MIR3 SINE MIR 84 199 -9 2977 9 0 0 chr17 42842635 42842951 -42595529 + AluYb8 SINE Alu 1 316 -2 2281 86 7 3 chr17 42842962 42843253 -42595227 + AluSp SINE Alu 1 292 -21 203 152 0 0 chr17 42843324 42843357 -42595123 + (CACCC)n Simple_repeat Simple_repeat 1 33 0 2179 120 10 0 chr17 42843640 42843939 -42594541 - AluSc SINE Alu -7 302 1 1901 154 0 22 chr17 42843939 42844250 -42594230 - AluJo SINE Alu -8 304 1 527 213 28 35 chr17 42844325 42844466 -42594014 + MER58B DNA MER1_type 202 341 0 2149 79 65 0 chr17 42845200 42845477 -42593003 - AluSx SINE Alu -17 295 1 330 115 0 0 chr17 42846588 42846640 -42591840 + (T)n Simple_repeat Simple_repeat 1 52 0 28 61 0 0 chr17 42846663 42846712 -42591768 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 42847563 42847585 -42590895 + AT_rich Low_complexity Low_complexity 1 22 0 387 277 155 7 chr17 42848399 42848547 -42589933 + MIR SINE MIR 86 255 -7 1511 149 71 78 chr17 42848645 42848953 -42589527 + AluJb SINE Alu 1 306 -6 2230 103 3 0 chr17 42849108 42849399 -42589081 - AluSp SINE Alu -21 292 1 224 299 47 28 chr17 42849417 42849524 -42588956 - MIR SINE MIR -66 142 34 2486 69 3 3 chr17 42850371 42850675 -42587805 + AluY SINE Alu 1 304 -7 2223 120 3 0 chr17 42850846 42851146 -42587334 + AluSx SINE Alu 1 301 -11 190 300 86 14 chr17 42851300 42851370 -42587110 + MER5C DNA MER1_type 3 77 -247 187 222 133 0 chr17 42851411 42851456 -42587024 + MIR3 SINE MIR 132 182 -26 183 191 149 21 chr17 42851425 42851472 -42587008 + L3 LINE CR1 1525 1577 0 * 326 273 369 25 chr17 42852257 42852883 -42585597 - L2 LINE L2 -226 3087 2238 391 338 43 19 chr17 42853089 42853299 -42585181 - L2 LINE L2 -2061 1253 1039 242 342 111 8 chr17 42853526 42853643 -42584837 - L3 LINE CR1 -30 1547 1419 817 267 48 48 chr17 42853955 42854128 -42584352 - L3 LINE CR1 -600 977 802 2373 98 0 3 chr17 42854128 42854425 -42584055 - AluSx SINE Alu -16 296 1 817 267 48 48 chr17 42854425 42854566 -42583914 - L3 LINE CR1 -774 803 663 292 241 235 75 chr17 42854566 42854668 -42583812 - L3 LINE CR1 -1093 484 400 2158 103 17 17 chr17 42854668 42854968 -42583512 - AluSx SINE Alu -10 302 3 292 241 235 75 chr17 42854968 42855052 -42583428 - L3 LINE CR1 -1177 400 268 1145 165 0 0 chr17 42855346 42855510 -42582970 - AluJb SINE Alu -15 297 134 2067 138 10 7 chr17 42855510 42855807 -42582673 - AluSx SINE Alu -14 298 1 288 296 46 37 chr17 42855824 42855932 -42582548 + MIR SINE MIR 39 147 -61 2268 133 0 3 chr17 42855937 42856245 -42582235 + AluJb SINE Alu 1 307 -5 832 222 64 0 chr17 42857096 42857299 -42581181 + U3 snRNA snRNA 1 216 -1 4596 44 45 27 chr17 42858897 42859492 -42578988 + LTR66 LTR ERVL 5 610 0 8285 64 28 12 chr17 42859492 42860604 -42577876 + HERVL66 LTR ERVL 1 1130 -3199 2626 78 8 0 chr17 42860604 42860963 -42577517 + HERVL66 LTR ERVL 1436 1797 -2532 * 4695 105 14 25 chr17 42860943 42861584 -42576896 + HERVL66 LTR ERVL 2654 3288 -1041 2193 113 0 3 chr17 42861584 42861884 -42576596 - AluSx SINE Alu -13 299 1 4695 105 14 25 chr17 42861884 42861957 -42576523 + HERVL66 LTR ERVL 3288 3360 -969 3588 117 12 1 chr17 42861946 42862616 -42575864 + HERVL66 LTR ERVL 3569 4329 0 * 4182 68 28 82 chr17 42862616 42863261 -42575219 + LTR66 LTR ERVL 1 610 0 904 172 38 6 chr17 42863982 42864139 -42574341 - FRAM SINE Alu -15 161 1 1950 135 28 7 chr17 42864185 42864474 -42574006 - AluSx SINE Alu -17 295 1 2149 105 0 20 chr17 42864543 42864707 -42573773 - AluSq SINE Alu -14 299 142 2315 77 23 10 chr17 42864707 42865007 -42573473 - AluY SINE Alu -7 304 1 2149 105 0 20 chr17 42865007 42865147 -42573333 - AluSq SINE Alu -171 142 1 2284 66 0 63 chr17 42865156 42865474 -42573006 - AluSg SINE Alu -12 298 1 334 155 0 14 chr17 42865575 42865683 -42572797 + Tigger5 DNA MER2_type 35 193 -2130 512 156 0 0 chr17 42865684 42865761 -42572719 + Tigger5 DNA MER2_type 2247 2323 0 242 236 9 94 chr17 42865763 42865856 -42572624 - L2 LINE L2 -71 3242 3157 2220 112 7 0 chr17 42865856 42866151 -42572329 + AluSx SINE Alu 1 297 -15 242 236 9 94 chr17 42866151 42866163 -42572317 - L2 LINE L2 -156 3157 3146 222 37 0 0 chr17 42866181 42866208 -42572272 + (TG)n Simple_repeat Simple_repeat 2 28 0 365 261 165 46 chr17 42866572 42866634 -42571846 - MIR SINE MIR -12 250 197 2324 75 0 0 chr17 42866634 42866950 -42571530 + AluY SINE Alu 1 316 0 365 261 165 46 chr17 42866950 42867104 -42571376 - MIR SINE MIR -65 197 7 465 248 92 7 chr17 42868121 42868262 -42570218 - MIR3 SINE MIR -23 185 33 243 217 43 113 chr17 42868604 42868643 -42569837 + MIR SINE MIR 59 99 -163 2228 112 7 3 chr17 42868643 42868948 -42569532 - AluSx SINE Alu -6 306 1 243 217 43 113 chr17 42868948 42869023 -42569457 + MIR SINE MIR 99 165 -97 188 240 20 20 chr17 42869892 42869942 -42568538 - L2 LINE L2 -86 3186 3137 813 142 0 45 chr17 42871319 42871453 -42567027 - FLAM_C SINE Alu -3 130 3 281 314 58 32 chr17 42871620 42871776 -42566704 - MIR SINE MIR -93 169 10 1106 61 0 0 chr17 42871857 42871989 -42566491 - AluY SINE Alu -21 290 159 198 33 33 0 chr17 42871992 42872022 -42566458 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1288 126 26 0 chr17 42872022 42872213 -42566267 - AluSg/x SINE Alu -29 281 86 2423 61 0 0 chr17 42872170 42872464 -42566016 - AluY SINE Alu -16 295 2 1646 163 14 4 chr17 42872929 42873205 -42565275 + AluJb SINE Alu 21 299 -13 458 330 33 0 chr17 42873949 42874131 -42564349 - MIR SINE MIR -5 257 70 25 65 0 0 chr17 42877514 42877560 -42560920 + GC_rich Low_complexity Low_complexity 1 46 0 336 237 78 125 chr17 42878166 42878311 -42560169 + MER113 DNA MER1_type? 1 151 -370 1624 168 10 42 chr17 42878311 42878621 -42559859 - AluJb SINE Alu -12 300 1 336 237 78 125 chr17 42878621 42878634 -42559846 + MER113 DNA MER1_type? 151 163 -358 2278 107 0 0 chr17 42878634 42878944 -42559536 - AluSg SINE Alu 0 310 1 336 237 78 125 chr17 42878944 42879034 -42559446 + MER113 DNA MER1_type? 163 256 -265 1503 119 22 41 chr17 42879034 42879302 -42559178 + AluSx SINE Alu 49 311 -1 336 237 78 125 chr17 42879302 42879435 -42559045 + MER113 DNA MER1_type? 256 366 -155 706 271 109 0 chr17 42879449 42879670 -42558810 - MIR SINE MIR -3 259 15 268 230 14 27 chr17 42879674 42879748 -42558732 + MER113 DNA MER1_type? 390 462 -59 359 236 54 74 chr17 42879792 42879940 -42558540 - MIR3 SINE MIR -48 160 16 1883 111 62 21 chr17 42881465 42881753 -42556727 + AluSx SINE Alu 1 300 -12 524 255 47 47 chr17 42881988 42882137 -42556343 + L2 LINE L2 1083 1231 -2083 886 202 6 22 chr17 42882138 42882316 -42556164 + AluJb SINE Alu 136 310 -2 533 259 151 5 chr17 42882328 42882530 -42555950 + L2 LINE L2 1471 1707 -1607 2173 105 7 3 chr17 42882530 42882834 -42555646 - AluSq SINE Alu -8 305 1 552 280 38 13 chr17 42882846 42883003 -42555477 + FRAM SINE Alu 1 156 -20 1582 117 0 13 chr17 42883257 42883487 -42554993 - AluSx SINE Alu -85 227 1 1494 165 0 0 chr17 42883641 42883913 -42554567 + L1MD3 LINE L1 7724 7995 0 856 112 16 0 chr17 42883923 42884048 -42554432 + AluJb SINE Alu 171 297 -15 332 312 88 59 chr17 42884397 42884567 -42553913 + L1MEd LINE L1 586 760 -5359 1150 167 0 0 chr17 42884722 42884914 -42553566 + AluSg/x SINE Alu 118 309 -1 478 333 96 11 chr17 42885544 42885805 -42552675 - L1ME LINE L1 -495 5626 5344 2413 39 0 0 chr17 42886076 42886395 -42552085 + AluY SINE Alu 1 319 0 1118 126 0 0 chr17 42886395 42886562 -42551918 + AluSc SINE Alu 132 298 -11 450 136 0 0 chr17 42886637 42886703 -42551777 - AluS SINE Alu -246 67 2 1661 171 7 0 chr17 42886767 42887059 -42551421 - AluJo SINE Alu -18 294 1 806 336 52 80 chr17 42887080 42887223 -42551257 - L1ME LINE L1 -1242 4904 4759 1693 151 11 0 chr17 42887223 42887488 -42550992 - AluJo SINE Alu -22 290 23 806 336 52 80 chr17 42887488 42887927 -42550553 - L1ME LINE L1 -1387 4759 4333 2356 82 0 0 chr17 42887927 42888232 -42550248 - AluSc SINE Alu -4 305 1 806 336 52 80 chr17 42888232 42888271 -42550209 - L1ME LINE L1 -1813 4333 4294 411 142 13 84 chr17 42888275 42888396 -42550084 - L1ME1 LINE L1 -339 5827 5741 349 167 0 107 chr17 42888396 42888480 -42550000 + MLT1A1 LTR MaLR 122 196 -169 2376 84 0 0 chr17 42888498 42888806 -42549674 - AluY SINE Alu -3 308 1 842 195 70 16 chr17 42888819 42889004 -42549476 + MLT1A1 LTR MaLR 171 365 0 839 144 45 24 chr17 42889004 42889236 -42549244 - L1ME1 LINE L1 -731 5433 5196 443 157 0 111 chr17 42889237 42889256 -42549224 - AluSg/x SINE Alu 0 309 290 1842 156 0 25 chr17 42889256 42889576 -42548904 - AluJb SINE Alu 0 312 1 443 157 0 111 chr17 42889576 42889598 -42548882 - AluSg/x SINE Alu -19 290 267 423 0 0 0 chr17 42889598 42889645 -42548835 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 443 157 0 111 chr17 42889645 42889710 -42548770 - AluSg/x SINE Alu -42 267 214 1187 80 0 0 chr17 42889710 42889860 -42548620 - AluY SINE Alu -159 152 3 2130 114 0 13 chr17 42889860 42890166 -42548314 - AluSx SINE Alu -10 302 1 303 102 17 0 chr17 42890167 42890226 -42548254 - L1ME1 LINE L1 -960 5186 5127 922 164 26 26 chr17 42890240 42890429 -42548051 - AluJo SINE Alu -8 304 116 593 278 40 0 chr17 42890429 42890605 -42547875 - L1ME1 LINE L1 -1055 5091 4909 405 183 37 0 chr17 42890725 42890807 -42547673 + MER5A DNA MER1_type 12 96 -93 369 271 37 9 chr17 42891542 42891649 -42546831 + L2 LINE L2 3159 3268 -4 210 210 37 25 chr17 42891841 42891922 -42546558 + C-rich Low_complexity Low_complexity 4 85 0 21 57 0 0 chr17 42892064 42892099 -42546381 + GC_rich Low_complexity Low_complexity 1 35 0 219 203 40 14 chr17 42892162 42892236 -42546244 + (CCCCG)n Simple_repeat Simple_repeat 1 76 0 204 67 0 0 chr17 42892378 42892408 -42546072 + (CGGGG)n Simple_repeat Simple_repeat 3 32 0 337 348 52 0 chr17 42892880 42893035 -42545445 + MIR SINE MIR 100 262 0 378 311 82 16 chr17 42894495 42894617 -42543863 + MIR SINE MIR 14 143 -119 637 285 6 17 chr17 42894619 42894798 -42543682 + MIR SINE MIR 32 208 -54 263 260 52 0 chr17 42895649 42895726 -42542754 - MER91A DNA MER1_type -115 81 1 1064 239 28 0 chr17 42895740 42895958 -42542522 + MER58A DNA MER1_type 1 224 0 199 150 0 25 chr17 42896195 42896235 -42542245 + MIR SINE MIR 107 145 -117 440 291 165 30 chr17 42896486 42896716 -42541764 - MIR SINE MIR 0 262 2 325 200 86 48 chr17 42896980 42897085 -42541395 + MIR SINE MIR 34 142 -120 2040 103 6 29 chr17 42897658 42897969 -42540511 + AluY SINE Alu 1 304 -7 443 308 28 39 chr17 42898129 42898311 -42540169 - MIR3 SINE MIR -11 197 18 2117 119 0 22 chr17 42898847 42899166 -42539314 - AluSx SINE Alu 0 312 1 611 187 0 0 chr17 42899190 42899297 -42539183 - U6 snRNA snRNA 0 107 1 334 281 39 33 chr17 42899306 42899408 -42539072 - L1ME4a LINE L1 -238 5883 5778 2355 81 0 0 chr17 42899408 42899715 -42538765 - AluY SINE Alu -4 307 1 334 281 39 33 chr17 42899715 42899765 -42538715 - L1ME4a LINE L1 -343 5778 5730 836 192 0 6 chr17 42899768 42899940 -42538540 - AluY SINE Alu -9 302 132 2346 78 7 7 chr17 42900046 42900354 -42538126 - AluY SINE Alu -3 308 1 2138 72 28 10 chr17 42900354 42900645 -42537835 - AluSc SINE Alu -13 296 1 607 156 0 0 chr17 42900646 42900736 -42537744 - AluJ/FLAM SINE Alu -221 91 2 237 330 62 34 chr17 42900821 42901000 -42537480 + L2 LINE L2 2831 3014 -258 1357 117 38 0 chr17 42901000 42901213 -42537267 - AluSp SINE Alu -3 310 90 995 118 0 0 chr17 42901602 42901738 -42536742 + AluSq/x SINE Alu 1 136 -177 2095 117 3 3 chr17 42901738 42902038 -42536442 + AluSg SINE Alu 1 300 -10 1859 128 60 13 chr17 42902176 42902474 -42536006 + AluSx SINE Alu 1 312 0 3296 187 64 51 chr17 42902714 42903367 -42535113 - LTR13 LTR ERVK -217 790 124 2336 61 3 7 chr17 42903367 42903663 -42534817 + AluY SINE Alu 1 295 -16 3296 187 64 51 chr17 42903663 42903789 -42534691 - LTR13 LTR ERVK -883 124 1 2079 111 0 3 chr17 42904001 42904298 -42534182 + AluY SINE Alu 1 296 -15 2194 90 0 7 chr17 42904505 42904805 -42533675 - AluSc SINE Alu -11 298 1 780 161 0 0 chr17 42904809 42904933 -42533547 - FLAM_A SINE Alu -9 133 10 508 162 81 0 chr17 42904955 42905066 -42533414 - FRAM SINE Alu -17 159 40 2366 60 0 7 chr17 42905246 42905573 -42532907 - AluY SINE Alu 0 311 1 2019 110 0 13 chr17 42905575 42905876 -42532604 - AluSg SINE Alu -13 297 1 316 102 0 0 chr17 42905877 42905926 -42532554 - Alu SINE Alu -4 297 249 488 211 53 0 chr17 42906270 42906384 -42532096 + MIR3 SINE MIR 88 207 -1 315 0 0 0 chr17 42906392 42906427 -42532053 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 207 295 107 36 chr17 42907186 42907298 -42531182 - L2 LINE L2 -93 3179 3060 * 292 296 34 0 chr17 42907278 42907366 -42531114 + MIR3 SINE MIR 92 182 -26 280 163 0 0 chr17 42907680 42907729 -42530751 - LTR13 LTR ERVK -958 49 1 1666 161 9 38 chr17 42907793 42907936 -42530544 + AluJb SINE Alu 1 147 -165 2439 47 0 7 chr17 42907936 42908233 -42530247 + AluY SINE Alu 1 295 -16 1666 161 9 38 chr17 42908233 42908405 -42530075 + AluJb SINE Alu 147 307 -5 2234 105 0 3 chr17 42909167 42909480 -42529000 + AluSx SINE Alu 1 312 0 2529 64 0 0 chr17 42909741 42910052 -42528428 - AluY SINE Alu 0 311 1 651 161 71 9 chr17 42910052 42910164 -42528316 - AluJo SINE Alu -176 136 18 1977 144 202 0 chr17 42910164 42910595 -42527885 - L1MC3 LINE L1 -93 7692 7175 331 273 0 0 chr17 42910595 42910672 -42527808 - MLT1F1 LTR MaLR -456 111 35 2386 69 3 0 chr17 42910680 42910983 -42527497 - AluY SINE Alu -6 305 2 315 0 0 0 chr17 42911764 42911799 -42526681 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 450 222 30 0 chr17 42911822 42911921 -42526559 - MIR3 SINE MIR -19 189 88 240 161 161 124 chr17 42912108 42912166 -42526314 - MIR3 SINE MIR -25 183 129 2317 105 0 3 chr17 42912166 42912479 -42526001 + AluSq SINE Alu 1 312 -1 240 161 161 124 chr17 42912479 42912557 -42525923 - MIR3 SINE MIR -79 129 42 286 305 103 40 chr17 42912807 42912981 -42525499 - MIR3 SINE MIR -8 200 16 1818 154 0 47 chr17 42913035 42913207 -42525273 - AluSx SINE Alu -7 305 153 1894 125 0 17 chr17 42913207 42913528 -42524952 - AluSg SINE Alu 0 310 1 1818 154 0 47 chr17 42913528 42913674 -42524806 - AluSx SINE Alu -159 153 2 2036 128 6 3 chr17 42913687 42914026 -42524454 - AluSq SINE Alu 0 313 1 918 111 7 7 chr17 42914026 42914161 -42524319 - AluSq/x SINE Alu -177 135 1 2078 93 3 3 chr17 42914839 42915139 -42523341 - AluY SINE Alu -11 300 1 234 0 0 0 chr17 42915200 42915226 -42523254 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 1475 115 0 14 chr17 42915566 42915775 -42522705 - AluSq SINE Alu -107 206 1 231 36 0 0 chr17 42915874 42915902 -42522578 + (TG)n Simple_repeat Simple_repeat 2 29 0 821 174 26 45 chr17 42915906 42916061 -42522419 - FRAM SINE Alu -23 153 2 1380 168 27 27 chr17 42916065 42916231 -42522249 - AluJo SINE Alu -14 298 130 2229 87 0 13 chr17 42916231 42916531 -42521949 - AluSg SINE Alu -14 296 1 1380 168 27 27 chr17 42916531 42916662 -42521818 - AluJo SINE Alu -181 131 1 2292 62 0 7 chr17 42916805 42917127 -42521353 - AluY SINE Alu 0 320 1 310 154 0 0 chr17 42917234 42917286 -42521194 - MER6 DNA MER2_type 0 865 814 956 171 0 0 chr17 42917288 42917466 -42521014 - AluSg/x SINE Alu 0 314 134 2017 115 24 0 chr17 42917466 42917762 -42520718 - AluSp SINE Alu -10 303 1 956 171 0 0 chr17 42917762 42917779 -42520701 - AluSg/x SINE Alu -179 135 119 968 158 7 0 chr17 42917779 42917925 -42520555 - AluSg/x SINE Alu -23 289 143 1050 173 0 78 chr17 42917925 42918156 -42520324 - AluJb SINE Alu -99 213 1 1734 79 110 76 chr17 42918165 42918455 -42520025 - AluSp SINE Alu -13 300 1 421 262 0 41 chr17 42918457 42918579 -42519901 - L1ME LINE L1 -415 5706 5590 210 250 0 0 chr17 42919442 42919486 -42518994 + (CA)n Simple_repeat Simple_repeat 1 44 0 976 189 0 0 chr17 42919600 42919775 -42518705 - MER3 DNA MER1_type -81 128 1 1419 120 0 24 chr17 42920121 42920193 -42518287 - AluSx SINE Alu -108 204 132 2283 99 0 6 chr17 42920193 42920505 -42517975 - AluSq SINE Alu -3 310 1 1419 120 0 24 chr17 42920505 42920641 -42517839 - AluSx SINE Alu -180 132 1 686 117 0 0 chr17 42920641 42920735 -42517745 - AluJ/FLAM SINE Alu -217 95 2 574 269 49 0 chr17 42920735 42920899 -42517581 - MER33 DNA MER1_type -272 52 1 224 191 0 44 chr17 42921505 42921573 -42516907 + (CAG)n Simple_repeat Simple_repeat 3 67 0 1776 104 104 0 chr17 42921669 42921949 -42516531 + AluSx SINE Alu 3 311 -1 530 302 50 6 chr17 42922532 42922714 -42515766 - MIR3 SINE MIR -3 205 16 441 273 48 80 chr17 42923483 42923670 -42514810 + MER5A DNA MER1_type 9 189 0 639 314 6 0 chr17 42924037 42924206 -42514274 + MER91A DNA MER1_type 1 170 -26 1874 82 104 4 chr17 42924210 42924480 -42514000 - AluSp SINE Alu -16 297 1 294 106 82 118 chr17 42924516 42924575 -42513905 + MIR SINE MIR 39 96 -166 1245 223 17 27 chr17 42924575 42924867 -42513613 - AluJo SINE Alu -21 291 3 294 106 82 118 chr17 42924867 42924892 -42513588 + MIR SINE MIR 96 120 -142 2240 96 0 3 chr17 42924944 42925246 -42513234 + AluSg SINE Alu 1 301 -9 183 191 143 0 chr17 42925968 42926010 -42512470 - MIR SINE MIR -9 253 206 * 263 211 19 0 chr17 42925982 42926034 -42512446 - L2 LINE L2 -35 3278 3226 222 62 0 0 chr17 42926369 42926401 -42512079 + (A)n Simple_repeat Simple_repeat 1 32 0 518 297 185 5 chr17 42929560 42929755 -42508725 - MIR SINE MIR -31 231 2 203 292 200 8 chr17 42935397 42935527 -42502953 - MIR3 SINE MIR -16 192 38 581 291 81 6 chr17 42936010 42936182 -42502298 + MER91A DNA MER1_type 12 196 0 207 250 0 0 chr17 42936621 42936661 -42501819 + (CACG)n Simple_repeat Simple_repeat 1 40 0 2085 114 3 3 chr17 42938111 42938409 -42500071 + AluSp SINE Alu 1 298 -15 189 0 0 0 chr17 42938754 42938775 -42499705 + (A)n Simple_repeat Simple_repeat 1 21 0 257 51 26 0 chr17 42939795 42939834 -42498646 + (CAGCC)n Simple_repeat Simple_repeat 5 44 0 267 103 0 0 chr17 42941185 42941224 -42497256 + (CGG)n Simple_repeat Simple_repeat 2 40 0 216 289 0 0 chr17 42941352 42941428 -42497052 + C-rich Low_complexity Low_complexity 3 78 0 389 291 94 12 chr17 42941986 42942201 -42496279 + L1ME4a LINE L1 5597 5825 -296 2249 85 0 7 chr17 42942205 42942500 -42495980 + AluSq SINE Alu 1 293 -20 727 121 85 50 chr17 42942510 42942651 -42495829 + AluJo SINE Alu 1 146 -166 2359 77 3 0 chr17 42942651 42942961 -42495519 + AluY SINE Alu 1 311 0 2516 52 0 3 chr17 42942967 42943277 -42495203 + AluY SINE Alu 1 309 -2 2422 67 3 0 chr17 42944121 42944420 -42494060 + AluSp SINE Alu 2 301 -12 352 301 135 0 chr17 42944890 42945023 -42493457 - L2 LINE L2 -2 3311 3161 2508 43 0 3 chr17 42945024 42945328 -42493152 + AluY SINE Alu 1 303 -8 438 208 21 0 chr17 42945344 42945440 -42493040 - MER94 DNA DNA -36 98 1 353 314 43 70 chr17 42945445 42945630 -42492850 - L2 LINE L2 -210 3103 2924 1258 186 115 11 chr17 42945689 42945958 -42492522 + AluSg SINE Alu 1 297 -13 1135 122 17 6 chr17 42945981 42946161 -42492319 + AluSg/x SINE Alu 109 290 -22 704 195 0 0 chr17 42946200 42946313 -42492167 + FLAM_A SINE Alu 3 115 -18 21 0 0 0 chr17 42946784 42946805 -42491675 + AT_rich Low_complexity Low_complexity 1 21 0 235 271 71 0 chr17 42947390 42947460 -42491020 - MIR SINE MIR -116 146 72 2191 99 0 0 chr17 42947546 42947839 -42490641 + AluSx SINE Alu 8 300 -12 2185 101 0 3 chr17 42947946 42948244 -42490236 + AluY SINE Alu 7 303 -8 2152 88 7 26 chr17 42948244 42948550 -42489930 + AluSc SINE Alu 1 301 -8 204 114 0 29 chr17 42949683 42949718 -42488762 + (CGG)n Simple_repeat Simple_repeat 3 36 0 206 284 10 69 chr17 42949995 42950097 -42488383 - MIR SINE MIR -79 183 88 2267 101 0 0 chr17 42950105 42950413 -42488067 + AluSx SINE Alu 1 308 -4 261 293 69 17 chr17 42950432 42950548 -42487932 + MIR SINE MIR 11 132 -130 224 296 228 6 chr17 42950555 42950717 -42487763 - MIR SINE MIR -62 200 3 265 244 200 0 chr17 42950719 42950809 -42487671 + MIR SINE MIR 149 256 -6 354 256 52 37 chr17 42951488 42951679 -42486801 + MLT1J LTR MaLR 309 502 -9 242 224 0 0 chr17 42951745 42951803 -42486677 + (TTA)n Simple_repeat Simple_repeat 1 58 0 314 272 150 14 chr17 42952144 42952291 -42486189 - L2 LINE L2 -180 3092 2926 2125 112 7 3 chr17 42952530 42952835 -42485645 + AluSq SINE Alu 3 308 -5 192 289 79 59 chr17 42953022 42953174 -42485306 - L2 LINE L2 -86 3186 3032 245 240 83 21 chr17 42954871 42954967 -42483513 + MIR SINE MIR 48 149 -113 321 251 200 29 chr17 42956133 42956308 -42482172 - MIR SINE MIR -14 248 44 257 322 42 17 chr17 42956643 42956761 -42481719 - L3b LINE CR1 -95 1488 1368 2295 101 7 0 chr17 42958203 42958511 -42479969 + AluSg SINE Alu 1 310 0 235 257 135 0 chr17 42958626 42958700 -42479780 - MIR3 SINE MIR -40 168 85 2216 76 24 0 chr17 42960387 42960676 -42477804 - AluSg SINE Alu -14 296 1 2131 99 10 0 chr17 42960678 42960970 -42477510 - AluSx SINE Alu -17 295 1 2048 107 35 0 chr17 42960977 42961266 -42477214 - AluSp SINE Alu -14 299 1 1705 146 3 43 chr17 42961271 42961572 -42476908 - AluJo SINE Alu -22 290 2 198 103 0 0 chr17 42962281 42962310 -42476170 + (T)n Simple_repeat Simple_repeat 1 29 0 1093 74 0 0 chr17 42962458 42962593 -42475887 + AluSq/x SINE Alu 1 135 -177 2107 92 0 4 chr17 42962593 42962937 -42475543 + AluSc SINE Alu 1 343 0 2304 102 0 3 chr17 42964047 42964360 -42474120 + AluSx SINE Alu 1 312 0 325 261 135 98 chr17 42964697 42965023 -42473457 + L2 LINE L2 2917 3254 -18 625 220 25 0 chr17 42965044 42965162 -42473318 + FLAM_A SINE Alu 12 132 -10 2267 119 0 0 chr17 42965188 42965499 -42472981 + AluSx SINE Alu 1 311 -1 1832 128 7 4 chr17 42967000 42967274 -42471206 + AluSx SINE Alu 1 275 -37 204 40 0 0 chr17 42967583 42967608 -42470872 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 230 0 0 32 chr17 42967607 42967638 -42470842 + (CA)n Simple_repeat Simple_repeat 1 30 0 1863 165 0 0 chr17 42968311 42968608 -42469872 + AluJb SINE Alu 1 297 -15 1274 87 92 0 chr17 42968611 42968796 -42469684 + L1PA11 LINE L1 5973 6174 0 330 259 25 0 chr17 42968799 42968880 -42469600 - MER5B DNA MER1_type -48 130 48 342 237 149 18 chr17 42968962 42969076 -42469404 - MIR SINE MIR -61 147 19 1999 80 94 0 chr17 42969645 42969920 -42468560 + AluSx SINE Alu 1 301 -11 741 191 8 0 chr17 42969946 42970077 -42468403 + FLAM_A SINE Alu 1 132 -1 1555 128 0 13 chr17 42970085 42970219 -42468261 + AluSx SINE Alu 2 133 -179 2130 98 3 10 chr17 42970219 42970515 -42467965 + AluSg SINE Alu 1 294 -16 1555 128 0 13 chr17 42970515 42970606 -42467874 + AluSx SINE Alu 133 224 -88 668 85 11 0 chr17 42970990 42971084 -42467396 + AluSx SINE Alu 204 298 -11 287 286 33 0 chr17 42971190 42971281 -42467199 - MIR SINE MIR -79 129 36 1249 108 0 0 chr17 42971835 42972011 -42466469 - AluSg/x SINE Alu 0 312 137 791 234 6 0 chr17 42972106 42972264 -42466216 - FRAM SINE Alu -6 160 2 1241 86 6 0 chr17 42972269 42972432 -42466048 - AluSq SINE Alu -16 297 134 1772 114 8 0 chr17 42972432 42972686 -42465794 - AluSx SINE Alu -5 307 52 232 188 169 68 chr17 43174602 43174652 -42263828 + MIR SINE MIR 17 61 -151 1711 148 22 41 chr17 43174652 43174970 -42263510 + AluJo SINE Alu 1 312 0 232 188 169 68 chr17 43174970 43175051 -42263429 + MIR SINE MIR 61 150 -62 295 308 21 42 chr17 43175433 43175576 -42262904 + MIR SINE MIR 63 202 -60 1402 222 27 0 chr17 43176648 43176941 -42261539 + AluJo SINE Alu 1 301 -1 2193 100 3 3 chr17 43176943 43177242 -42261238 + AluSx SINE Alu 1 299 -13 282 106 0 0 chr17 43178777 43178824 -42259656 + (GGA)n Simple_repeat Simple_repeat 1 47 0 1870 130 0 51 chr17 43182131 43182447 -42256033 - AluJo SINE Alu -12 300 1 333 47 0 0 chr17 43182783 43182826 -42255654 + (CA)n Simple_repeat Simple_repeat 2 44 0 2346 77 3 0 chr17 43183725 43184025 -42254455 - AluSx SINE Alu -11 301 1 2384 72 0 3 chr17 43184087 43184391 -42254089 - AluY SINE Alu -8 303 1 197 33 33 0 chr17 43188197 43188227 -42250253 + (TA)n Simple_repeat Simple_repeat 1 31 0 2156 98 14 0 chr17 43192539 43192836 -42245644 - AluSc SINE Alu 0 309 9 755 152 9 0 chr17 43192873 43192985 -42245495 + AluJb SINE Alu 5 117 -195 1923 100 15 4 chr17 43193246 43193516 -42244964 - AluSc SINE Alu -35 274 2 1346 124 16 0 chr17 43193520 43193713 -42244767 + AluJb SINE Alu 105 300 -12 388 313 95 23 chr17 43194855 43195117 -42243363 + MER102a DNA MER1_type 31 311 -19 1043 117 39 45 chr17 43195989 43196145 -42242335 + AluSg/x SINE Alu 133 289 -23 785 188 0 8 chr17 43196145 43196278 -42242202 + FLAM_C SINE Alu 1 132 -1 1043 117 39 45 chr17 43196278 43196300 -42242180 + AluSg/x SINE Alu 289 310 -2 1556 187 0 35 chr17 43198013 43198323 -42240157 - AluJo SINE Alu -13 299 1 2073 121 0 3 chr17 43198394 43198691 -42239789 + AluSx SINE Alu 1 296 -16 2077 131 0 0 chr17 43198691 43198986 -42239494 + AluSg SINE Alu 1 297 -13 2194 101 0 3 chr17 43198986 43199282 -42239198 + AluSx SINE Alu 1 296 -16 1957 129 3 10 chr17 43199292 43199587 -42238893 - AluSg SINE Alu -16 294 2 1799 101 11 45 chr17 43201062 43201349 -42237131 - AluSx SINE Alu 0 312 36 302 287 42 63 chr17 43201483 43201626 -42236854 - L2 LINE L2 -6 3307 3168 1763 152 22 0 chr17 43201778 43202054 -42236426 - AluJb SINE Alu -30 282 1 291 324 186 20 chr17 43202382 43202561 -42235919 - L2 LINE L2 0 3272 3038 450 0 0 0 chr17 43202561 43202611 -42235869 + (TG)n Simple_repeat Simple_repeat 2 51 0 291 324 186 20 chr17 43202611 43202684 -42235796 - L2 LINE L2 -234 3038 2978 1895 161 0 6 chr17 43203498 43203809 -42234671 - AluJb SINE Alu -3 309 1 1837 146 4 0 chr17 43203886 43204166 -42234314 + AluJo SINE Alu 18 298 -14 2219 95 0 0 chr17 43204167 43204463 -42234017 + AluSg1 SINE Alu 1 296 -13 2155 110 3 10 chr17 43205024 43205334 -42233146 - AluSx SINE Alu -4 308 1 353 256 11 0 chr17 43205823 43205913 -42232567 - MER5A DNA MER1_type -83 106 16 1611 152 13 45 chr17 43206609 43206919 -42231561 - AluJb SINE Alu 0 312 13 2211 96 3 3 chr17 43207383 43207684 -42230796 + AluSx SINE Alu 1 301 -11 2099 119 3 3 chr17 43207686 43207989 -42230491 + AluSx SINE Alu 2 304 -8 730 281 120 78 chr17 43208132 43208541 -42229939 - L1ME4a LINE L1 -4 6117 5726 1805 143 20 17 chr17 43208541 43208835 -42229645 - AluJo SINE Alu -16 296 2 730 281 120 78 chr17 43208835 43209041 -42229439 - L1ME4a LINE L1 -395 5726 5530 937 121 0 8 chr17 43209041 43209173 -42229307 + AluJo/FLAM SINE Alu 2 132 -170 2355 64 3 0 chr17 43209175 43209472 -42229008 + AluY SINE Alu 1 298 -13 730 281 120 78 chr17 43209472 43209604 -42228876 - L1ME4a LINE L1 -591 5530 5334 1441 208 41 0 chr17 43209898 43210192 -42228288 + AluJo SINE Alu 1 306 -6 251 324 40 17 chr17 43210278 43210454 -42228026 - MARNA DNA Mariner -234 352 173 2218 97 0 28 chr17 43210455 43210774 -42227706 - AluSg SINE Alu 0 310 1 2105 112 0 3 chr17 43210780 43211075 -42227405 - AluSx SINE Alu -18 294 1 1769 147 7 33 chr17 43211393 43211692 -42226788 + AluJo SINE Alu 1 291 -21 192 179 0 0 chr17 43212095 43212134 -42226346 + T-rich Low_complexity Low_complexity 1 39 0 1938 149 0 3 chr17 43212741 43213037 -42225443 + AluSx SINE Alu 1 295 -17 2383 76 0 3 chr17 43213046 43213348 -42225132 + AluY SINE Alu 7 307 -4 2235 100 3 0 chr17 43213348 43213657 -42224823 + AluSp SINE Alu 1 310 -3 2432 68 3 0 chr17 43213810 43214119 -42224361 + AluY SINE Alu 1 310 -1 745 161 8 8 chr17 43214261 43214379 -42224101 - FLAM_C SINE Alu -15 118 1 2199 96 3 16 chr17 43214406 43214719 -42223761 + AluSg SINE Alu 1 309 -1 1590 173 0 4 chr17 43214851 43215158 -42223322 + AluJb SINE Alu 7 312 0 2162 113 3 0 chr17 43216118 43216419 -42222061 + AluSp SINE Alu 1 302 -11 2214 129 0 0 chr17 43217029 43217340 -42221140 - AluSq SINE Alu -2 311 1 23 0 0 0 chr17 43217515 43217538 -42220942 + AT_rich Low_complexity Low_complexity 1 23 0 1954 151 0 25 chr17 43217701 43218020 -42220460 - AluSx SINE Alu -1 311 1 2050 76 42 3 chr17 43218020 43218308 -42220172 - AluSg SINE Alu -11 299 1 1998 125 0 7 chr17 43218309 43218606 -42219874 - AluSx SINE Alu -17 295 1 1456 126 141 45 chr17 43218607 43218876 -42219604 - AluJo SINE Alu -17 295 1 2312 56 0 16 chr17 43219289 43219592 -42218888 + AluY SINE Alu 1 298 -13 318 292 62 0 chr17 43219931 43220027 -42218453 - MIR3 SINE MIR -33 175 74 188 380 6 34 chr17 43220288 43220378 -42218102 + L2 LINE L2 3134 3218 -95 2147 93 17 0 chr17 43220378 43220669 -42217811 - AluSx SINE Alu -16 296 1 188 380 6 34 chr17 43220669 43220757 -42217723 + L2 LINE L2 3218 3307 -6 2386 51 0 0 chr17 43220951 43221243 -42217237 + AluY SINE Alu 1 292 -19 701 101 71 0 chr17 43221523 43221622 -42216858 + AluSc SINE Alu 185 290 -19 1847 178 0 0 chr17 43221629 43221927 -42216553 - AluJb SINE Alu -14 298 1 933 206 0 17 chr17 43221999 43222174 -42216306 + FAM SINE Alu 1 172 -3 808 69 0 0 chr17 43222354 43222455 -42216025 - HY3 scRNA scRNA 0 101 1 286 165 116 21 chr17 43222489 43222654 -42215826 + AluJo SINE Alu 72 292 -10 1921 128 10 13 chr17 43223045 43223180 -42215300 + AluSx SINE Alu 1 135 -177 2322 77 0 0 chr17 43223180 43223479 -42215001 + AluY SINE Alu 1 299 -12 1921 128 10 13 chr17 43223479 43223649 -42214831 + AluSx SINE Alu 135 305 -7 425 66 33 0 chr17 43224003 43224064 -42214416 - AluSc SINE Alu -14 295 233 2158 101 0 14 chr17 43224305 43224591 -42213889 + AluSg SINE Alu 1 336 0 447 0 19 0 chr17 43224591 43224645 -42213835 + (TAAA)n Simple_repeat Simple_repeat 2 100 0 2270 102 0 10 chr17 43224649 43224953 -42213527 + AluSg SINE Alu 1 301 -9 1956 152 20 10 chr17 43224960 43225262 -42213218 + AluSx SINE Alu 3 307 -5 183 233 0 0 chr17 43225298 43225341 -42213139 + MIR SINE MIR 194 236 -26 1977 117 0 0 chr17 43225425 43225690 -42212790 - AluSx SINE Alu -19 293 29 21 36 0 0 chr17 43226722 43226750 -42211730 + AT_rich Low_complexity Low_complexity 1 28 0 1541 196 7 24 chr17 43226888 43227179 -42211301 + AluJo SINE Alu 1 286 -26 36 0 0 0 chr17 43227187 43227223 -42211257 + AT_rich Low_complexity Low_complexity 1 36 0 954 134 0 8 chr17 43227302 43227436 -42211044 - AluJb SINE Alu -179 133 1 1926 108 4 8 chr17 43227553 43227821 -42210659 + AluSx SINE Alu 1 267 -45 892 136 0 15 chr17 43227896 43228028 -42210452 + FLAM_C SINE Alu 1 130 -3 2486 81 0 3 chr17 43228259 43228568 -42209912 - AluY SINE Alu -3 308 1 233 200 20 0 chr17 43228720 43228770 -42209710 - L2 LINE L2 0 3313 3263 251 211 0 0 chr17 43229020 43229072 -42209408 - MIR SINE MIR -154 108 57 348 0 58 0 chr17 43280150 43280202 -42158278 + (TA)n Simple_repeat Simple_repeat 2 56 0 1410 157 4 64 chr17 43280204 43280342 -42158138 - AluJb SINE Alu -39 273 159 2352 98 0 7 chr17 43280342 43280648 -42157832 - AluSg SINE Alu -6 304 1 1410 157 4 64 chr17 43280648 43280789 -42157691 - AluJb SINE Alu -153 159 11 757 157 0 0 chr17 43280817 43280932 -42157548 + FRAM SINE Alu 47 161 -15 1862 184 0 3 chr17 43280947 43281246 -42157234 + AluJo SINE Alu 1 298 -14 318 243 57 0 chr17 43281610 43281680 -42156800 - MIR3 SINE MIR -27 181 108 317 102 204 0 chr17 43281953 43282051 -42156429 + (CCCCAA)n Simple_repeat Simple_repeat 1 118 0 2321 123 0 0 chr17 43282442 43282752 -42155728 + AluSx SINE Alu 1 310 -2 539 229 20 139 chr17 43282839 43283084 -42155396 - MIR SINE MIR 0 262 47 228 35 0 0 chr17 43283943 43283972 -42154508 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2240 120 0 16 chr17 43283976 43284292 -42154188 - AluSx SINE Alu -1 311 1 409 234 84 9 chr17 43284365 43284472 -42154008 - MIR SINE MIR -61 147 33 234 0 0 0 chr17 43284917 43284943 -42153537 + (A)n Simple_repeat Simple_repeat 1 26 0 571 228 0 8 chr17 43285151 43285932 -42152548 + (TGG)n Simple_repeat Simple_repeat 1 774 0 262 139 0 0 chr17 43286032 43286075 -42152405 + Alu SINE Alu 236 278 -24 369 0 0 0 chr17 43286075 43286116 -42152364 + (TC)n Simple_repeat Simple_repeat 2 42 0 * 906 131 0 0 chr17 43286115 43286260 -42152220 + (TA)n Simple_repeat Simple_repeat 2 146 0 420 175 82 41 chr17 43286325 43286422 -42152058 + MER81 DNA DNA 10 110 -4 212 380 18 31 chr17 43286436 43286599 -42151881 - L2 LINE L2 -1781 1533 1373 1194 243 106 36 chr17 43286722 43286810 -42151670 - LTR16A LTR ERVL -5 445 365 1607 149 86 4 chr17 43286810 43286964 -42151516 - AluJo SINE Alu -21 291 151 315 0 0 0 chr17 43286964 43286999 -42151481 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1607 149 86 4 chr17 43286999 43287113 -42151367 - AluJo SINE Alu -161 151 1 1194 243 106 36 chr17 43287113 43287440 -42151040 - LTR16A LTR ERVL -85 365 1 2054 94 0 0 chr17 43287696 43287980 -42150500 + AluSx SINE Alu 34 312 0 1709 195 13 7 chr17 43288226 43288534 -42149946 - AluJo SINE Alu -2 310 1 2453 95 0 9 chr17 43288582 43288938 -42149542 - AluSq SINE Alu 0 353 1 2327 92 29 10 chr17 43288939 43289245 -42149235 - AluSx SINE Alu 0 312 1 189 288 125 25 chr17 43289302 43289382 -42149098 + MIR SINE MIR 60 147 -61 263 242 16 0 chr17 43290527 43290589 -42147891 - L2 LINE L2 -73 3240 3178 2341 116 7 0 chr17 43290673 43290983 -42147497 + AluSx SINE Alu 1 312 0 224 180 20 20 chr17 43291397 43291447 -42147033 + MIR SINE MIR 55 104 -104 1896 76 0 0 chr17 43291549 43291774 -42146706 - AluY SINE Alu -86 225 1 540 309 31 36 chr17 43291783 43291977 -42146503 - MIR SINE MIR -49 213 21 2285 113 0 7 chr17 43292033 43292343 -42146137 - AluSc SINE Alu -1 308 1 2419 211 46 28 chr17 43292503 43293038 -42145442 + L1MC4 LINE L1 7286 7835 -207 1468 195 29 55 chr17 43293038 43293192 -42145288 - MER58B DNA MER1_type -2080 340 184 2291 109 0 0 chr17 43293192 43293495 -42144985 - AluSx SINE Alu -9 303 1 1468 195 29 55 chr17 43293495 43293688 -42144792 - MER58B DNA MER1_type -2236 184 2 2419 211 46 28 chr17 43293688 43293755 -42144725 + L1MC4 LINE L1 7835 7899 -143 21 36 0 0 chr17 43293799 43293827 -42144653 + AT_rich Low_complexity Low_complexity 1 28 0 587 154 0 17 chr17 43293838 43293955 -42144525 + LTR9B LTR ERV1 445 559 -85 1728 176 31 7 chr17 43294325 43294615 -42143865 - AluJo SINE Alu -15 297 1 2072 131 7 13 chr17 43294620 43294925 -42143555 - AluSx SINE Alu -9 303 1 2199 121 0 3 chr17 43295290 43295588 -42142892 + AluSg SINE Alu 3 299 -11 394 246 49 41 chr17 43295627 43295749 -42142731 + L3 LINE CR1 363 485 -1092 2281 98 34 0 chr17 43295781 43296077 -42142403 + AluSx SINE Alu 1 306 -6 538 282 117 0 chr17 43296206 43296369 -42142111 + L3 LINE CR1 463 644 -933 733 193 0 0 chr17 43296385 43296499 -42141981 - FLAM_C SINE Alu -25 118 5 424 287 96 15 chr17 43296511 43296647 -42141833 + L3 LINE CR1 650 796 -781 1495 72 10 16 chr17 43296649 43296842 -42141638 + AluSx SINE Alu 1 192 -120 893 113 33 7 chr17 43296882 43297032 -42141448 + L1MB8 LINE L1 6025 6178 0 1831 168 0 0 chr17 43297070 43297338 -42141142 + AluJo SINE Alu 12 279 -33 232 314 33 46 chr17 43297688 43297841 -42140639 - L1ME LINE L1 -400 5762 5612 250 0 100 0 chr17 43298066 43298116 -42140364 + (TA)n Simple_repeat Simple_repeat 2 56 0 2236 102 11 0 chr17 43298116 43298401 -42140079 - AluSp SINE Alu -25 288 1 240 77 58 19 chr17 43298404 43298456 -42140024 - MER3 DNA MER1_type 0 2483 2430 * 327 220 10 30 chr17 43298432 43298532 -42139948 - MER3 DNA MER1_type -72 137 40 1783 109 56 0 chr17 43299618 43299884 -42138596 - AluSq SINE Alu -9 304 24 387 0 0 0 chr17 43299954 43299997 -42138483 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1789 170 0 3 chr17 43299999 43300281 -42138199 - AluJb SINE Alu -31 281 1 1514 197 0 46 chr17 43300283 43300608 -42137872 - AluJo SINE Alu -2 310 1 2350 84 3 7 chr17 43300608 43300905 -42137575 - AluSp SINE Alu -17 296 1 2334 127 0 0 chr17 43300923 43301230 -42137250 - AluSg SINE Alu 0 310 4 218 315 18 82 chr17 43301468 43301687 -42136793 + L2 LINE L2 2890 3094 -178 2118 97 7 0 chr17 43303012 43303281 -42135199 - AluSx SINE Alu -41 271 1 1695 144 6 95 chr17 43303518 43303844 -42134636 + AluJo SINE Alu 1 297 -15 252 143 245 0 chr17 43303934 43303983 -42134497 - MIR SINE MIR -64 144 84 182 294 82 12 chr17 43304030 43304115 -42134365 + L2 LINE L2 2993 3083 -189 2342 110 7 0 chr17 43304576 43304876 -42133604 + AluSx SINE Alu 1 302 -10 200 267 23 12 chr17 43304880 43304966 -42133514 + MIR SINE MIR 31 117 -91 232 129 113 0 chr17 43305541 43305603 -42132877 + (TTGGGG)n Simple_repeat Simple_repeat 1 69 0 1098 275 116 55 chr17 43305704 43305935 -42132545 + L1M4 LINE L1 2895 3111 -3035 1795 160 10 7 chr17 43305935 43306229 -42132251 + AluJb SINE Alu 1 295 -17 1098 275 116 55 chr17 43306229 43306748 -42131732 + L1M4 LINE L1 3111 3597 -2549 2176 100 3 29 chr17 43306748 43307058 -42131422 + AluSq SINE Alu 1 302 -11 1098 275 116 55 chr17 43307058 43307284 -42131196 + L1M4 LINE L1 3597 3808 -2338 1720 177 6 35 chr17 43307284 43307600 -42130880 + AluJo SINE Alu 6 312 0 1098 275 116 55 chr17 43307600 43307888 -42130592 + L1M4 LINE L1 3808 4238 -1908 2553 53 0 3 chr17 43307896 43308197 -42130283 + AluY SINE Alu 1 300 -11 383 287 246 0 chr17 43308360 43308527 -42129953 + MIR SINE MIR 54 261 -1 218 314 105 9 chr17 43308578 43308683 -42129797 - L2 LINE L2 0 3313 3199 2460 94 0 0 chr17 43309657 43309966 -42128514 + AluSx SINE Alu 1 309 -3 925 261 27 0 chr17 43310119 43310341 -42128139 + MIR SINE MIR 34 261 -1 381 257 26 0 chr17 43310857 43310970 -42127510 + L1M4 LINE L1 3830 3945 -2201 325 337 22 5 chr17 43311020 43311204 -42127276 + L1M4 LINE L1 4182 4368 -1778 1745 82 140 0 chr17 43311219 43311462 -42127018 + AluSx SINE Alu 5 281 -31 1979 98 28 73 chr17 43311670 43311997 -42126483 + AluSq SINE Alu 1 312 -1 409 232 232 17 chr17 43312083 43312264 -42126216 + L3 LINE CR1 809 1028 -549 4213 224 92 26 chr17 43312337 43313570 -42124910 + L2 LINE L2 1436 2749 -565 700 160 46 0 chr17 43313570 43313701 -42124779 - MER20 DNA MER1_type 0 219 83 569 290 77 22 chr17 43313719 43313999 -42124481 + L2 LINE L2 2766 3067 -246 319 284 0 0 chr17 43313971 43314045 -42124435 + L2 LINE L2 3225 3298 -15 * 3018 166 34 34 chr17 43314178 43314828 -42123652 - L1MB7 LINE L1 -54 6130 5481 200 227 0 0 chr17 43315242 43315286 -42123194 + (ATG)n Simple_repeat Simple_repeat 3 46 0 288 274 51 32 chr17 43315314 43315471 -42123009 + AluSq SINE Alu 124 283 -20 818 153 0 36 chr17 43315506 43315643 -42122837 + FLAM_C SINE Alu 2 133 0 22 0 0 0 chr17 43315747 43315769 -42122711 + AT_rich Low_complexity Low_complexity 1 22 0 446 194 234 0 chr17 43316047 43316171 -42122309 + MIR SINE MIR 103 255 -7 2272 82 40 10 chr17 43316406 43316710 -42121770 + AluSq SINE Alu 1 313 0 437 231 87 0 chr17 43317945 43318049 -42120431 + MIR SINE MIR 34 146 -62 353 299 94 8 chr17 43318728 43318855 -42119625 + MIR SINE MIR 71 208 -54 241 329 224 8 chr17 43318896 43319133 -42119347 - L2 LINE L2 0 3272 2985 188 304 72 0 chr17 43319154 43319223 -42119257 - L2 LINE L2 -1288 2026 1953 2338 88 0 31 chr17 43319633 43319953 -42118527 - AluY SINE Alu -1 310 1 2230 124 0 0 chr17 43319955 43320254 -42118226 - AluSg SINE Alu -11 299 1 427 199 219 73 chr17 43320299 43320331 -42118149 - L2 LINE L2 -1387 1927 1901 1914 173 0 3 chr17 43320331 43320631 -42117849 - AluJb SINE Alu -13 299 1 427 199 219 73 chr17 43320631 43320785 -42117695 - L2 LINE L2 -1413 1901 1694 2469 79 3 3 chr17 43320785 43321089 -42117391 - AluSp SINE Alu -9 304 1 427 199 219 73 chr17 43321089 43321147 -42117333 - L2 LINE L2 -1620 1694 1646 262 196 0 0 chr17 43321162 43321208 -42117272 + AluJb SINE Alu 1 46 -256 1097 139 187 24 chr17 43321311 43321520 -42116960 + AluJb SINE Alu 52 294 -18 1977 161 20 0 chr17 43322274 43322578 -42115902 - AluJb SINE Alu -2 310 1 1341 137 0 0 chr17 43322656 43322839 -42115641 - AluSg/x SINE Alu -16 294 112 1381 106 5 5 chr17 43322999 43323187 -42115293 - AluSx SINE Alu -124 188 1 1959 158 0 26 chr17 43324624 43324935 -42113545 + AluSx SINE Alu 9 311 -1 2163 117 3 10 chr17 43324938 43325245 -42113235 + AluSq SINE Alu 1 305 -8 255 284 57 0 chr17 43326882 43326970 -42111510 - L2 LINE L2 -40 3232 3140 2005 141 0 0 chr17 43327789 43328086 -42110394 + AluSx SINE Alu 3 299 -13 1450 216 41 22 chr17 43328535 43328897 -42109583 - L1MC4 LINE L1 -196 7846 7478 2178 204 161 46 chr17 43328918 43329007 -42109473 - L1MC4 LINE L1 -790 7252 7175 2095 133 0 13 chr17 43329007 43329323 -42109157 - AluSx SINE Alu 0 312 1 253 0 26 26 chr17 43329324 43329362 -42109118 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2105 112 0 0 chr17 43329362 43329649 -42108831 - AluSx SINE Alu -25 287 1 2178 204 161 46 chr17 43329649 43329958 -42108522 - L1MC4 LINE L1 -867 7175 6903 1564 191 0 23 chr17 43329958 43330262 -42108218 - AluJo SINE Alu -15 297 1 2178 204 161 46 chr17 43330262 43330291 -42108189 - L1MC4 LINE L1 -1139 6903 6879 2447 58 0 13 chr17 43330291 43330602 -42107878 - AluY SINE Alu -4 307 1 2178 204 161 46 chr17 43330602 43330888 -42107592 - L1MC4 LINE L1 -1163 6879 6451 952 167 60 0 chr17 43331451 43331619 -42106861 - AluJo SINE Alu -15 297 120 26 0 0 27 chr17 43331619 43331630 -42106850 + AT_rich Low_complexity Low_complexity 1 11 -25 2356 68 0 0 chr17 43331630 43331924 -42106556 - AluY SINE Alu -17 294 1 26 0 0 27 chr17 43331924 43331949 -42106531 + AT_rich Low_complexity Low_complexity 11 36 0 797 187 22 0 chr17 43331949 43332088 -42106392 - FLAM_C SINE Alu 0 143 2 269 213 111 56 chr17 43332088 43332196 -42106284 + MIR SINE MIR 48 161 -101 1771 186 0 10 chr17 43332828 43333139 -42105341 + AluJo SINE Alu 1 308 -4 2390 53 0 10 chr17 43333139 43333440 -42105040 + AluY SINE Alu 1 298 -13 490 230 25 89 chr17 43333443 43333523 -42104957 + HAL1 LINE L1 2230 2314 -193 1408 194 38 17 chr17 43333523 43333812 -42104668 + AluJb SINE Alu 1 295 -17 490 230 25 89 chr17 43333812 43333966 -42104514 + HAL1 LINE L1 2314 2449 -58 1258 220 0 3 chr17 43335557 43336004 -42102476 + G-rich Low_complexity Low_complexity 1 624 0 462 215 0 0 chr17 43336050 43336180 -42102300 + (CCA)n Simple_repeat Simple_repeat 2 131 0 572 219 6 0 chr17 43336207 43336376 -42102104 + (CCA)n Simple_repeat Simple_repeat 1 170 0 398 312 85 26 chr17 43336697 43336886 -42101594 - MIR SINE MIR -7 255 56 265 324 122 0 chr17 43337096 43337235 -42101245 + L2 LINE L2 3158 3313 0 432 55 0 0 chr17 43338255 43338310 -42100170 + (CA)n Simple_repeat Simple_repeat 1 55 0 776 164 8 15 chr17 43339207 43339341 -42099139 - FLAM_C SINE Alu 0 133 1 253 221 52 39 chr17 43339725 43339802 -42098678 + L2 LINE L2 3171 3248 -24 1012 189 17 0 chr17 43341224 43341399 -42097081 - MER45A DNA AcHobo 0 178 1 387 263 58 21 chr17 43341750 43341907 -42096573 + MIR3 SINE MIR 30 205 -3 2107 98 3 3 chr17 43342855 43343140 -42095340 + AluSc SINE Alu 1 285 -24 672 267 41 5 chr17 43343472 43343667 -42094813 + MIR SINE MIR 17 218 -44 452 309 26 109 chr17 43343769 43343995 -42094485 + L2 LINE L2 2520 2763 -509 2181 100 6 10 chr17 43343995 43344306 -42094174 - AluSx SINE Alu 0 312 3 452 309 26 109 chr17 43344306 43344692 -42093788 + L2 LINE L2 2763 3199 -73 257 75 25 0 chr17 43344785 43344825 -42093655 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 2008 69 76 7 chr17 43344942 43345217 -42093263 + AluY SINE Alu 1 294 -17 1839 130 10 20 chr17 43345224 43345517 -42092963 + AluSx SINE Alu 1 290 -22 326 278 72 10 chr17 43345519 43345616 -42092864 + L1MCa LINE L1 1974 2076 -4350 315 318 5 85 chr17 43345537 43345709 -42092771 - L1MCa LINE L1 -4353 2073 1916 * 1733 135 4 11 chr17 43345709 43345990 -42092490 - AluJo SINE Alu 0 312 34 315 318 5 85 chr17 43345990 43346006 -42092474 - L1MCa LINE L1 -4510 1916 1900 2374 71 0 3 chr17 43346033 43346341 -42092139 - AluY SINE Alu -3 308 2 2167 101 7 0 chr17 43346421 43346718 -42091762 - AluSq SINE Alu -14 299 1 1322 162 74 39 chr17 43346743 43347049 -42091431 + AluJb SINE Alu 1 312 0 310 271 187 0 chr17 43347233 43347340 -42091140 + L2 LINE L2 3187 3313 0 369 107 0 0 chr17 43347705 43347761 -42090719 - Alu SINE Alu -6 294 239 324 0 0 0 chr17 43347925 43347961 -42090519 + (GA)n Simple_repeat Simple_repeat 2 37 0 2028 128 3 13 chr17 43348407 43348720 -42089760 - AluSx SINE Alu -2 310 1 435 297 62 53 chr17 43348842 43348862 -42089618 - MIR SINE MIR -35 227 209 1599 131 42 8 chr17 43348862 43349122 -42089358 - AluSq SINE Alu -6 307 39 435 297 62 53 chr17 43349122 43349173 -42089307 - MIR SINE MIR -53 209 160 2072 92 30 26 chr17 43349173 43349478 -42089002 - AluSx SINE Alu -6 306 1 435 297 62 53 chr17 43349478 43349614 -42088866 - MIR SINE MIR -102 160 17 454 111 111 0 chr17 43350977 43351049 -42087431 - MADE1 DNA Mariner 0 80 1 441 339 18 0 chr17 43351092 43351246 -42087234 - MIR SINE MIR -47 215 56 2097 120 10 3 chr17 43351246 43351554 -42086926 - AluSq SINE Alu -3 310 1 441 339 18 0 chr17 43351554 43351567 -42086913 - MIR SINE MIR -206 56 45 3351 222 59 13 chr17 43351570 43352493 -42085987 + L1ME1 LINE L1 5182 6161 -5 470 268 77 26 chr17 43353167 43353352 -42085128 - MIR SINE MIR -20 242 56 2050 136 7 0 chr17 43354142 43354452 -42084028 + AluSx SINE Alu 1 312 0 305 275 106 28 chr17 43354464 43354682 -42083798 + L2 LINE L2 2815 3049 -223 288 0 0 0 chr17 43354763 43354795 -42083685 + (TG)n Simple_repeat Simple_repeat 2 33 0 244 299 35 0 chr17 43355503 43355590 -42082890 - MIR SINE MIR -57 151 62 513 115 0 0 chr17 43356012 43356090 -42082390 + (TTCC)n Simple_repeat Simple_repeat 1 78 0 2151 138 0 0 chr17 43356090 43356402 -42082078 - AluSq SINE Alu -1 312 1 395 288 101 0 chr17 43358912 43359051 -42079429 + MIR3 SINE MIR 45 197 -11 582 241 33 108 chr17 43359082 43359294 -42079186 + MIR SINE MIR 63 258 -4 449 277 44 50 chr17 43359981 43360171 -42078309 - MIR3 SINE MIR 0 208 20 218 191 0 0 chr17 43360187 43360229 -42078251 + (TCCA)n Simple_repeat Simple_repeat 2 43 0 1916 119 3 38 chr17 43360388 43360708 -42077772 - AluSx SINE Alu -3 309 1 217 217 33 0 chr17 43360771 43360831 -42077649 - L2 LINE L2 -217 3055 2994 180 152 0 0 chr17 43361522 43361555 -42076925 + (TG)n Simple_repeat Simple_repeat 1 33 0 308 320 39 33 chr17 43362096 43362249 -42076231 - MIR SINE MIR -54 208 55 755 204 56 0 chr17 43362251 43362413 -42076067 - AluJ SINE Alu -2 310 140 1923 110 4 14 chr17 43362419 43362700 -42075780 - AluSx SINE Alu -14 298 21 2114 78 64 0 chr17 43364273 43364555 -42073925 - AluSc SINE Alu -9 300 1 862 131 7 22 chr17 43364555 43364692 -42073788 - AluJ SINE Alu -177 135 1 662 232 76 5 chr17 43364694 43364879 -42073601 + MIR SINE MIR 63 260 -2 1943 159 3 0 chr17 43364898 43365206 -42073274 + AluJo SINE Alu 4 312 0 435 214 202 23 chr17 43365298 43365471 -42073009 - LTR1 LTR ERV1 0 785 582 301 293 13 142 chr17 43365643 43365954 -42072526 + L2 LINE L2 2929 3199 -73 257 75 25 0 chr17 43366047 43366087 -42072393 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 2111 110 0 0 chr17 43366138 43366440 -42072040 - AluSx SINE Alu 0 303 2 1761 134 51 10 chr17 43366446 43366738 -42071742 - AluJo SINE Alu -8 304 1 359 233 35 0 chr17 43366805 43366891 -42071589 + MIR SINE MIR 117 205 -57 216 179 12 131 chr17 43366922 43366963 -42071517 + MIR SINE MIR 185 213 -49 2063 100 3 10 chr17 43366963 43367262 -42071218 + AluY SINE Alu 1 297 -14 216 179 12 131 chr17 43367262 43367304 -42071176 + MIR SINE MIR 213 258 -4 1996 121 19 0 chr17 43367954 43368261 -42070219 + AluSq SINE Alu 1 313 0 305 281 0 21 chr17 43368494 43368590 -42069890 - MIR SINE MIR -1 261 168 1578 139 106 0 chr17 43368665 43368938 -42069542 - AluJo SINE Alu -10 302 1 931 267 40 8 chr17 43369817 43370064 -42068416 + MIR SINE MIR 5 259 -3 24 53 0 0 chr17 43371490 43371528 -42066952 + GC_rich Low_complexity Low_complexity 1 38 0 182 37 37 0 chr17 43371657 43371684 -42066796 + (CAGCG)n Simple_repeat Simple_repeat 4 31 0 25 65 0 0 chr17 43371778 43371824 -42066656 + GC_rich Low_complexity Low_complexity 1 46 0 31 0 0 0 chr17 43371962 43371993 -42066487 + GC_rich Low_complexity Low_complexity 1 31 0 22 70 0 0 chr17 43372169 43372212 -42066268 + GC_rich Low_complexity Low_complexity 1 43 0 1966 151 0 19 chr17 43374459 43374595 -42063885 + AluSx SINE Alu 1 138 -174 2461 63 0 0 chr17 43374595 43374897 -42063583 + AluY SINE Alu 1 302 -9 1966 151 0 19 chr17 43374897 43375078 -42063402 + AluSx SINE Alu 138 312 0 2190 100 0 10 chr17 43376181 43376481 -42061999 + AluSx SINE Alu 1 297 -15 197 226 65 16 chr17 43376553 43376615 -42061865 + L2 LINE L2 3205 3269 -3 225 0 0 0 chr17 43377971 43377996 -42060484 + (TC)n Simple_repeat Simple_repeat 2 26 0 2753 10 0 0 chr17 43377996 43378302 -42060178 - AluYb8 SINE Alu -12 306 1 2065 105 7 3 chr17 43378302 43378587 -42059893 - AluSx SINE Alu -17 295 10 205 135 0 58 chr17 43379470 43379522 -42058958 + (TCCC)n Simple_repeat Simple_repeat 1 49 0 2341 69 0 0 chr17 43380446 43380737 -42057743 - AluSc SINE Alu -5 304 14 193 135 250 39 chr17 43380787 43380839 -42057641 + MIR SINE MIR 43 105 -103 1094 66 0 0 chr17 43380952 43381089 -42057391 + AluSc SINE Alu 161 297 -12 2111 93 7 0 chr17 43381098 43381377 -42057103 + AluSp SINE Alu 1 281 -32 315 0 0 0 chr17 43381379 43381414 -42057066 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1356 223 7 7 chr17 43381437 43381728 -42056752 + AluJo SINE Alu 1 291 -21 377 291 91 22 chr17 43381815 43381990 -42056490 - MIR SINE MIR -40 222 29 1513 183 50 27 chr17 43383095 43383395 -42055085 + AluJo SINE Alu 1 307 -5 2148 96 3 10 chr17 43383395 43383713 -42054767 + AluSc SINE Alu 1 309 0 341 354 95 0 chr17 43384208 43384355 -42054125 - MIR SINE MIR -67 195 35 352 312 70 13 chr17 43384726 43384960 -42053520 - MIR3 SINE MIR -2 260 4 32 43 0 0 chr17 43385130 43385176 -42053304 + GC_rich Low_complexity Low_complexity 1 46 0 25 95 0 0 chr17 43385384 43385458 -42053022 + GC_rich Low_complexity Low_complexity 1 74 0 339 372 71 46 chr17 43389415 43389810 -42048670 - L2 LINE L2 -10 3262 2858 477 0 0 0 chr17 43390338 43390391 -42048089 + (TG)n Simple_repeat Simple_repeat 1 53 0 180 0 0 0 chr17 43391061 43391081 -42047399 + (T)n Simple_repeat Simple_repeat 1 20 0 181 319 0 0 chr17 43391731 43391778 -42046702 + MIR3 SINE MIR 111 157 -51 1531 142 15 40 chr17 43391793 43391970 -42046510 - AluJo SINE Alu 0 312 132 2218 101 13 0 chr17 43391970 43392268 -42046212 - AluSx SINE Alu -8 304 3 2400 69 7 0 chr17 43392270 43392576 -42045904 - AluY SINE Alu -3 308 1 1531 142 15 40 chr17 43392576 43392669 -42045811 - AluJo SINE Alu -181 131 46 1679 158 58 0 chr17 43393112 43393390 -42045090 + AluJo SINE Alu 1 294 -18 398 190 8 99 chr17 43393633 43393719 -42044761 + MER58 DNA MER1_type 1 75 -2345 2329 82 3 3 chr17 43393719 43394022 -42044458 - AluSx SINE Alu -9 303 1 398 190 8 99 chr17 43394022 43394056 -42044424 + MER58 DNA MER1_type 75 110 -2310 2218 102 0 6 chr17 43394364 43394677 -42043803 - AluSq SINE Alu -2 311 1 693 229 224 50 chr17 43394700 43395058 -42043422 + L2 LINE L2 2894 3313 0 291 300 50 20 chr17 43395380 43395480 -42043000 + MIR3 SINE MIR 101 203 -5 785 100 53 135 chr17 43396294 43396464 -42042016 + AluSg/x SINE Alu 147 302 -10 399 322 168 9 chr17 43397335 43397549 -42040931 + MIR SINE MIR 11 258 -4 219 69 0 0 chr17 43397873 43397902 -42040578 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 182 162 27 0 chr17 43398342 43398379 -42040101 + MIR SINE MIR 109 146 -62 180 0 0 0 chr17 43401853 43401873 -42036607 + (CAG)n Simple_repeat Simple_repeat 2 21 0 197 288 15 15 chr17 43402085 43402151 -42036329 + MIR SINE MIR 80 145 -117 678 231 0 8 chr17 43402868 43403002 -42035478 + FLAM_A SINE Alu 1 133 0 298 361 114 6 chr17 43403593 43403759 -42034721 + MIR SINE MIR 55 238 -24 894 102 39 0 chr17 43404608 43404735 -42033745 + AluSx SINE Alu 5 136 -177 2101 118 0 0 chr17 43404735 43405015 -42033465 + AluSx SINE Alu 1 280 -32 240 35 0 0 chr17 43405017 43405046 -42033434 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 * 296 102 20 0 chr17 43405045 43405094 -42033386 + (GGAA)n Simple_repeat Simple_repeat 4 53 0 955 170 6 0 chr17 43405096 43405255 -42033225 + AluSx SINE Alu 119 278 -32 459 52 0 0 chr17 43405255 43405313 -42033167 + (GGAA)n Simple_repeat Simple_repeat 2 59 0 625 244 26 14 chr17 43405313 43405522 -42032958 + MIR SINE MIR 40 255 -7 356 191 0 130 chr17 43407208 43407323 -42031157 - L2 LINE L2 0 3272 3173 21 36 0 0 chr17 43407671 43407699 -42030781 + GC_rich Low_complexity Low_complexity 1 28 0 2206 109 3 3 chr17 43408267 43408579 -42029901 - AluSx SINE Alu 0 312 1 585 245 145 32 chr17 43409001 43409195 -42029285 + MIR SINE MIR 5 219 -43 235 139 0 0 chr17 43409268 43409304 -42029176 + MIR SINE MIR 82 117 -91 363 284 7 7 chr17 43409696 43409837 -42028643 + CT-rich Low_complexity Low_complexity 1 141 0 195 42 0 0 chr17 43410523 43410547 -42027933 + (CA)n Simple_repeat Simple_repeat 1 24 0 238 344 110 26 chr17 43410595 43410749 -42027731 - MIR SINE MIR -50 212 46 979 155 31 0 chr17 43412008 43412169 -42026311 + AluJb SINE Alu 137 302 -10 225 304 0 0 chr17 43412171 43412227 -42026253 + L3b LINE CR1 1519 1574 -9 2023 138 10 10 chr17 43413415 43413727 -42024753 - AluJb SINE Alu 0 312 1 1829 168 13 7 chr17 43413964 43414268 -42024212 + AluJb SINE Alu 1 306 -6 1842 145 3 0 chr17 43414647 43414929 -42023551 - AluJb SINE Alu -13 299 17 349 287 59 0 chr17 43415058 43415159 -42023321 - L1ME4a LINE L1 -24 6097 5991 419 262 18 36 chr17 43415165 43415333 -42023147 - L1ME4a LINE L1 -178 5943 5779 1702 188 17 3 chr17 43415363 43415661 -42022819 - AluJo SINE Alu -3 309 8 225 262 0 0 chr17 43416430 43416491 -42021989 + MARNA DNA Mariner 250 310 -276 375 328 15 8 chr17 43416525 43416656 -42021824 + MIR SINE MIR 65 196 -66 2183 85 37 3 chr17 43417999 43418294 -42020186 - AluSx SINE Alu -1 311 7 242 269 85 69 chr17 43419493 43419623 -42018857 - L2 LINE L2 0 3272 3141 1851 157 0 0 chr17 43419923 43420230 -42018250 + AluSx SINE Alu 1 307 0 180 77 0 0 chr17 43420900 43420926 -42017554 + (TA)n Simple_repeat Simple_repeat 2 27 0 2406 48 10 3 chr17 43421326 43421619 -42016861 + AluY SINE Alu 1 295 -16 2258 117 0 0 chr17 43421656 43421964 -42016516 + AluSx SINE Alu 1 308 -4 250 293 61 12 chr17 43423287 43423369 -42015111 + MIR3 SINE MIR 95 180 -28 190 346 51 0 chr17 43425489 43425567 -42012913 + MIR SINE MIR 29 110 -152 714 306 63 28 chr17 43425572 43425824 -42012656 + MIR SINE MIR 2 262 0 200 273 264 27 chr17 43426368 43426478 -42012002 + MIR3 SINE MIR 25 160 -48 180 288 17 17 chr17 43429171 43429230 -42009250 - L2 LINE L2 0 3272 3214 2284 110 0 3 chr17 43429651 43429951 -42008529 - AluSx SINE Alu -13 299 1 335 312 84 13 chr17 43431875 43432029 -42006451 + L2 LINE L2 3090 3254 -18 396 0 0 0 chr17 43432716 43432760 -42005720 + (TC)n Simple_repeat Simple_repeat 2 45 0 243 0 0 0 chr17 43432759 43432786 -42005694 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 2539 83 0 13 chr17 43432788 43433102 -42005378 - AluSg SINE Alu 0 310 1 1377 176 24 4 chr17 43433102 43433357 -42005123 - Tigger2a DNA MER2_type -174 260 1 294 276 186 21 chr17 43433720 43433865 -42004615 - MIR3 SINE MIR -6 202 34 1810 174 3 3 chr17 43434241 43434534 -42003946 + AluJb SINE Alu 1 293 -19 210 340 62 10 chr17 43435249 43435346 -42003134 + MIR SINE MIR 34 135 -73 2265 116 3 3 chr17 43436242 43436552 -42001928 + AluSx SINE Alu 3 312 0 1729 176 0 14 chr17 43436727 43437011 -42001469 - AluJo SINE Alu -24 288 9 246 230 0 143 chr17 43437018 43437144 -42001336 + L1MC/D LINE L1 5701 5808 -2000 935 215 143 12 chr17 43437163 43437414 -42001066 + AluJb SINE Alu 3 286 -16 1197 188 5 14 chr17 43437587 43437805 -42000675 + AluJo SINE Alu 85 300 -12 1797 164 14 7 chr17 43437938 43438225 -42000255 + AluJb SINE Alu 1 289 -23 340 302 60 33 chr17 43439507 43439689 -41998791 + MIR3 SINE MIR 16 202 -6 447 332 55 27 chr17 43440516 43440736 -41997744 + MIR SINE MIR 37 262 0 1921 157 3 20 chr17 43441584 43441889 -41996591 - AluJb SINE Alu -6 306 7 2299 86 3 7 chr17 43442304 43442596 -41995884 - AluY SINE Alu -20 291 1 2034 113 41 17 chr17 43442596 43442889 -41995591 - AluSx SINE Alu -12 300 1 228 194 313 0 chr17 43443081 43443148 -41995332 + L2 LINE L2 3177 3264 -8 2076 148 7 3 chr17 43443149 43443452 -41995028 + AluJb SINE Alu 1 304 -8 195 42 0 0 chr17 43444310 43444334 -41994146 + (TG)n Simple_repeat Simple_repeat 2 25 0 204 97 0 0 chr17 43444386 43444417 -41994063 + (TG)n Simple_repeat Simple_repeat 2 32 0 656 151 63 16 chr17 43445169 43445295 -41993185 + FLAM_C SINE Alu 2 133 0 1238 220 65 0 chr17 43445305 43445550 -41992930 + AluJb SINE Alu 1 261 -51 1241 152 1 39 chr17 43445550 43445824 -41992656 + AluJo SINE Alu 70 305 -7 2329 128 0 0 chr17 43445826 43446138 -41992342 + AluSx SINE Alu 1 312 0 186 71 0 0 chr17 43447261 43447289 -41991191 + (T)n Simple_repeat Simple_repeat 1 28 0 360 180 85 12 chr17 43447303 43447492 -41990988 - AluJb SINE Alu -78 224 1 2209 110 7 3 chr17 43447502 43447801 -41990679 - AluSx SINE Alu -12 300 1 1142 113 0 25 chr17 43447893 43448052 -41990428 - AluJb SINE Alu -6 306 152 1804 142 0 11 chr17 43448217 43448478 -41990002 - AluSg SINE Alu -52 258 1 234 95 0 48 chr17 43448483 43448525 -41989955 - Alu SINE Alu -176 126 87 213 39 0 0 chr17 43448526 43448552 -41989928 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2123 103 13 35 chr17 43448555 43448866 -41989614 - AluSc SINE Alu -5 304 1 807 215 0 19 chr17 43448867 43449025 -41989455 - FRAM SINE Alu -21 155 1 1871 52 0 0 chr17 43451049 43451260 -41987220 + AluY SINE Alu 83 293 -18 263 116 0 23 chr17 43451864 43451907 -41986573 + LTR23 LTR ERV1 320 361 -76 2285 118 3 0 chr17 43451930 43452236 -41986244 + AluSp SINE Alu 1 307 -6 431 216 40 68 chr17 43454014 43454162 -41984318 - MIR SINE MIR -50 212 69 2266 106 3 3 chr17 43454364 43454667 -41983813 - AluSc SINE Alu -6 303 1 2122 110 11 3 chr17 43455075 43455357 -41983123 + AluSp SINE Alu 5 288 -25 321 380 37 6 chr17 43456186 43456349 -41982131 - L1 LINE L1 -1353 4793 4626 678 317 52 14 chr17 43456523 43457106 -41981374 - L1 LINE L1 -1636 4510 3906 375 23 0 0 chr17 43457107 43457151 -41981329 + (CA)n Simple_repeat Simple_repeat 1 44 0 2578 28 24 3 chr17 43457157 43457447 -41981033 - AluYb8 SINE Alu -22 296 1 2049 92 20 31 chr17 43457448 43457741 -41980739 - AluSg SINE Alu -16 294 5 1747 178 40 0 chr17 43457786 43458084 -41980396 - AluJb SINE Alu -2 310 1 2345 99 3 0 chr17 43458653 43458947 -41979533 - AluSg SINE Alu -15 295 1 1346 177 151 4 chr17 43458958 43459223 -41979257 - AluJb SINE Alu -8 304 1 2580 81 0 0 chr17 43459315 43459623 -41978857 - AluSq SINE Alu -5 308 1 461 314 65 16 chr17 43459624 43459809 -41978671 - MIR SINE MIR -62 200 7 473 254 150 42 chr17 43460442 43460494 -41977986 - MIR SINE MIR 0 262 217 1953 132 7 4 chr17 43460494 43460803 -41977677 - AluJb SINE Alu 0 310 1 473 254 150 42 chr17 43460803 43460942 -41977538 - MIR SINE MIR -45 217 49 225 309 96 11 chr17 43461331 43461425 -41977055 + MIR SINE MIR 91 192 -70 1904 96 111 4 chr17 43462193 43462473 -41976007 - AluSx SINE Alu -2 310 1 2270 116 0 7 chr17 43462658 43462961 -41975519 - AluSg SINE Alu -8 302 2 2155 100 10 17 chr17 43463064 43463363 -41975117 + AluSx SINE Alu 1 297 -15 302 271 187 0 chr17 43463727 43463834 -41974646 - L2 LINE L2 0 3313 3187 1432 162 74 39 chr17 43464018 43464324 -41974156 - AluJb SINE Alu 0 312 1 2303 101 7 0 chr17 43464351 43464648 -41973832 + AluSq SINE Alu 1 299 -14 2543 72 0 0 chr17 43464728 43465034 -41973446 + AluY SINE Alu 2 307 -4 1783 140 7 7 chr17 43465077 43465356 -41973124 + AluJo SINE Alu 34 312 0 305 289 72 10 chr17 43465450 43465547 -41972933 - L1MCa LINE L1 -4350 2076 1974 1918 127 17 21 chr17 43465549 43465840 -41972640 - AluSx SINE Alu -22 290 1 2149 69 76 7 chr17 43465847 43466122 -41972358 - AluY SINE Alu -17 294 1 1731 138 43 3 chr17 43466183 43466465 -41972015 + AluSx SINE Alu 1 293 -19 2232 125 6 3 chr17 43466467 43466778 -41971702 + AluSx SINE Alu 1 312 0 274 211 84 28 chr17 43466784 43466855 -41971625 - L1ME3A LINE L1 -44 6126 6052 2349 173 36 126 chr17 43466860 43467228 -41971252 - LTR8 LTR ERV1 -3 688 289 1678 165 3 30 chr17 43467228 43467525 -41970955 - AluJb SINE Alu -17 295 7 2349 173 36 126 chr17 43467525 43467597 -41970883 - LTR8 LTR ERV1 -402 289 212 2634 47 0 0 chr17 43467597 43467895 -41970585 - AluY SINE Alu -13 298 1 2349 173 36 126 chr17 43467895 43467950 -41970530 - LTR8 LTR ERV1 -479 212 154 2399 76 3 7 chr17 43467950 43468251 -41970229 - AluSp SINE Alu -13 300 1 2349 173 36 126 chr17 43468251 43468476 -41970004 - LTR8 LTR ERV1 -537 154 31 996 139 72 0 chr17 43468496 43468662 -41969818 - AluSg/x SINE Alu -6 304 127 225 0 0 0 chr17 43468665 43468690 -41969790 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 2253 99 3 7 chr17 43468695 43468989 -41969491 - AluSx SINE Alu -19 293 1 303 89 0 0 chr17 43468991 43469036 -41969444 - LTR8A LTR ERV1 -682 45 1 288 139 63 25 chr17 43469036 43469115 -41969365 - L1ME3A LINE L1 -119 6051 5970 1963 125 104 0 chr17 43469122 43469402 -41969078 - AluSx SINE Alu -3 309 1 1927 90 102 4 chr17 43469416 43469682 -41968798 - AluSx SINE Alu -20 292 1 1407 106 16 0 chr17 43469694 43469882 -41968598 - AluSg/x SINE Alu -17 293 103 265 61 0 0 chr17 43469882 43469915 -41968565 - Alu SINE Alu -262 38 6 2236 97 20 7 chr17 43469922 43470220 -41968260 - AluSq SINE Alu -11 302 1 938 203 185 9 chr17 43470221 43470265 -41968215 - L1ME3A LINE L1 -193 5977 5942 1798 161 0 71 chr17 43470265 43470601 -41967879 - AluJb SINE Alu 0 312 1 938 203 185 9 chr17 43470601 43470886 -41967594 - L1ME3A LINE L1 -228 5942 5590 1965 154 74 29 chr17 43470886 43471045 -41967435 - MER39 LTR ERV1 0 707 557 2111 94 0 11 chr17 43471045 43471320 -41967160 + AluSg SINE Alu 1 272 -38 180 0 0 0 chr17 43471324 43471344 -41967136 + (TC)n Simple_repeat Simple_repeat 1 20 0 * 279 0 0 0 chr17 43471343 43471374 -41967106 + (CA)n Simple_repeat Simple_repeat 1 31 0 1965 154 74 29 chr17 43471344 43471830 -41966650 - MER39 LTR ERV1 -152 555 21 487 152 0 33 chr17 43471830 43471922 -41966558 - AluJ/FRAM SINE Alu -8 304 216 2149 122 3 0 chr17 43472007 43472302 -41966178 + AluSx SINE Alu 2 297 -15 2292 66 0 4 chr17 43472310 43472584 -41965896 + AluSc SINE Alu 1 273 -36 180 0 0 0 chr17 43472589 43472609 -41965871 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2134 119 7 7 chr17 43472752 43473055 -41965425 - AluJb SINE Alu -5 307 5 299 232 232 8 chr17 43473231 43473356 -41965124 - Charlie8 DNA MER1_type -2215 202 50 197 304 45 18 chr17 43473434 43473546 -41964934 + MIR SINE MIR 83 197 -65 33 43 0 0 chr17 43474241 43474288 -41964192 + GC_rich Low_complexity Low_complexity 1 47 0 248 118 0 20 chr17 43474326 43474377 -41964103 + (CGG)n Simple_repeat Simple_repeat 3 52 0 210 318 15 0 chr17 43474390 43474456 -41964024 + G-rich Low_complexity Low_complexity 2 68 0 363 123 0 0 chr17 43476715 43476772 -41961708 - AluY SINE Alu 0 301 245 1372 80 0 17 chr17 43476772 43476948 -41961532 - AluY SINE Alu -138 173 1 520 126 204 0 chr17 43476952 43477055 -41961425 - FRAM SINE Alu -18 158 35 183 42 0 0 chr17 43477080 43477104 -41961376 + (TCCTG)n Simple_repeat Simple_repeat 2 25 0 2102 96 3 75 chr17 43477238 43477571 -41960909 - AluSq SINE Alu -4 309 1 34 42 0 0 chr17 43477769 43477817 -41960663 + AT_rich Low_complexity Low_complexity 1 48 0 2329 96 7 0 chr17 43478047 43478348 -41960132 - AluY SINE Alu -8 303 1 2241 116 0 3 chr17 43478377 43478678 -41959802 + AluSx SINE Alu 1 300 -12 2167 119 27 0 chr17 43478804 43479098 -41959382 - AluSx SINE Alu -10 302 1 2120 89 50 0 chr17 43479099 43479381 -41959099 - AluSp SINE Alu -17 296 1 1331 136 144 38 chr17 43479382 43479646 -41958834 - AluJo SINE Alu 0 312 21 1218 118 12 6 chr17 43479771 43479941 -41958539 - AluSg/x SINE Alu -11 301 131 247 180 0 0 chr17 43479952 43480002 -41958478 - Alu SINE Alu -1 301 252 1555 183 10 28 chr17 43480002 43480291 -41958189 + AluJo SINE Alu 5 288 -24 2306 82 7 3 chr17 43480293 43480584 -41957896 + AluSg SINE Alu 1 292 -18 2222 126 0 3 chr17 43480587 43480896 -41957584 + AluY SINE Alu 1 308 -3 730 183 0 28 chr17 43480897 43481039 -41957441 + FLAM_C SINE Alu 2 139 -4 2419 101 0 0 chr17 43481049 43481357 -41957123 + AluSc SINE Alu 1 308 -1 325 336 112 24 chr17 43481660 43481955 -41956525 + L2 LINE L2 2160 2480 -834 2204 86 0 4 chr17 43482073 43482342 -41956138 - AluSq SINE Alu -41 272 5 307 230 40 0 chr17 43482354 43482428 -41956052 - L1MB8 LINE L1 -115 6063 5987 2620 74 0 0 chr17 43482479 43482790 -41955690 - AluY SINE Alu 0 311 1 520 225 62 0 chr17 43482823 43482952 -41955528 - L1MB8 LINE L1 -460 5661 5525 2525 74 7 3 chr17 43482980 43483290 -41955190 - AluSp SINE Alu -2 311 1 1044 93 0 14 chr17 43484446 43484585 -41953895 + AluSx SINE Alu 3 139 -173 392 161 65 0 chr17 43484585 43484678 -41953802 + L1MB3 LINE L1 5565 5663 -505 1175 143 0 0 chr17 43484680 43484841 -41953639 + AluSx SINE Alu 133 293 -19 2257 133 68 45 chr17 43484848 43484999 -41953481 + L1MB3 LINE L1 5683 5829 -354 2494 53 0 0 chr17 43484999 43485329 -41953151 - AluY SINE Alu 0 330 1 2257 133 68 45 chr17 43485329 43485665 -41952815 + L1MB3 LINE L1 5829 6182 -1 767 154 0 22 chr17 43485744 43485880 -41952600 - FLAM_C SINE Alu 0 133 1 1971 93 40 25 chr17 43485904 43486182 -41952298 - AluSq SINE Alu -31 282 1 2504 90 0 0 chr17 43486465 43486775 -41951705 - AluSq SINE Alu -3 310 1 358 268 10 41 chr17 43486868 43486965 -41951515 + MIR SINE MIR 7 100 -162 2394 92 3 10 chr17 43486972 43487277 -41951203 - AluSp SINE Alu -10 303 1 386 260 12 98 chr17 43487369 43487473 -41951007 + MIR SINE MIR 7 92 -170 2270 92 16 10 chr17 43487473 43487776 -41950704 - AluSp SINE Alu -7 306 2 386 260 12 98 chr17 43487776 43487844 -41950636 + MIR SINE MIR 92 164 -98 2136 122 3 13 chr17 43487901 43488213 -41950267 + AluSx SINE Alu 1 309 -3 2694 46 0 0 chr17 43488567 43488870 -41949610 - AluY SINE Alu -4 307 5 383 374 140 28 chr17 43489015 43489379 -41949101 + L1MC/D LINE L1 5313 5717 -2091 902 143 15 0 chr17 43489390 43489523 -41948957 + AluSg/x SINE Alu 165 299 -13 2220 104 7 0 chr17 43489747 43490044 -41948436 - AluSx SINE Alu -13 299 1 290 200 120 0 chr17 43490091 43490166 -41948314 - L1MEc LINE L1 -5941 455 372 2392 91 0 0 chr17 43490266 43490562 -41947918 + AluY SINE Alu 1 296 -15 2372 107 0 3 chr17 43490913 43491221 -41947259 + AluSx SINE Alu 1 307 -5 1822 133 56 3 chr17 43491349 43491634 -41946846 + AluSx SINE Alu 1 300 -12 2267 88 7 7 chr17 43491759 43492054 -41946426 + AluSc SINE Alu 1 295 -14 927 54 69 0 chr17 43492203 43492333 -41946147 + MER85 DNA T2_type 1 139 0 2001 106 3 44 chr17 43492351 43492673 -41945807 - AluSc SINE Alu 0 310 1 2209 109 26 0 chr17 43492679 43492983 -41945497 - AluSx SINE Alu 0 312 1 1993 164 10 3 chr17 43493019 43493324 -41945156 + AluJb SINE Alu 1 307 -5 2393 85 3 16 chr17 43493324 43493630 -41944850 + AluSq SINE Alu 1 302 -11 1609 184 35 17 chr17 43493637 43493925 -41944555 + AluJb SINE Alu 1 293 -19 1159 53 0 8 chr17 43494409 43494542 -41943938 + AluSq/x SINE Alu 1 132 -180 2165 95 7 14 chr17 43494544 43494839 -41943641 + AluY SINE Alu 1 293 -18 2480 68 14 0 chr17 43494839 43495134 -41943346 + AluSp SINE Alu 1 299 -14 852 221 0 0 chr17 43495438 43495592 -41942888 - AluJo/FRAM SINE Alu -23 289 136 2068 121 19 25 chr17 43495595 43495910 -41942570 - AluSp SINE Alu 0 313 1 1651 133 44 58 chr17 43495931 43496225 -41942255 - AluJb SINE Alu -10 302 13 306 0 0 0 chr17 43496243 43496277 -41942203 + (TG)n Simple_repeat Simple_repeat 2 35 0 232 186 0 0 chr17 43496279 43496322 -41942158 - AluJo SINE Alu -20 282 240 377 185 0 0 chr17 43496329 43496394 -41942086 - AluJo SINE Alu -151 151 87 2213 97 43 0 chr17 43498017 43498316 -41940164 + AluSx SINE Alu 1 312 0 1507 123 5 0 chr17 43498510 43498714 -41939766 - AluSx SINE Alu -107 205 1 1916 154 0 27 chr17 43501694 43501993 -41936487 - AluJb SINE Alu -21 291 1 21 36 0 0 chr17 43502040 43502068 -41936412 + AT_rich Low_complexity Low_complexity 1 28 0 2257 107 7 10 chr17 43502801 43503110 -41935370 + AluSq SINE Alu 1 308 -5 2180 94 3 39 chr17 43503403 43503712 -41934768 - AluSg SINE Alu -12 298 1 2206 78 35 3 chr17 43504298 43504581 -41933899 + AluSq SINE Alu 1 292 -21 1702 171 28 3 chr17 43504783 43505069 -41933411 - AluJo SINE Alu -19 293 1 2140 128 7 0 chr17 43505200 43505497 -41932983 + AluSx SINE Alu 1 299 -13 1940 119 42 18 chr17 43505542 43505827 -41932653 + AluSx SINE Alu 1 292 -20 2059 88 0 4 chr17 43507343 43507604 -41930876 + AluY SINE Alu 44 303 -8 1177 137 15 54 chr17 43507640 43507845 -41930635 + AluJb SINE Alu 85 281 -31 285 29 0 0 chr17 43507867 43507901 -41930579 + (TG)n Simple_repeat Simple_repeat 2 35 0 248 239 223 8 chr17 43507969 43508099 -41930381 - L1ME1 LINE L1 -2 6164 6007 229 245 69 49 chr17 43508210 43508312 -41930168 + MER117 DNA MER1_type 3 106 -91 3151 110 95 44 chr17 43508448 43509152 -41929328 + LTR1 LTR ERV1 1 785 0 2159 109 0 23 chr17 43509173 43509477 -41929003 + AluSg SINE Alu 1 297 -13 978 178 70 43 chr17 43510554 43510784 -41927696 - Tigger3(Golem) DNA MER2_type -46 2983 2748 1991 133 0 26 chr17 43510794 43511070 -41927410 + AluJb SINE Alu 1 270 -42 2473 82 3 0 chr17 43511070 43511375 -41927105 - AluSp SINE Alu -6 307 2 1991 133 0 26 chr17 43511375 43511400 -41927080 + AluJb SINE Alu 270 294 -18 574 142 108 0 chr17 43511404 43511524 -41926956 + FLAM_C SINE Alu 1 133 0 1838 173 0 7 chr17 43511968 43512291 -41926189 - AluJo SINE Alu 0 321 1 227 250 80 20 chr17 43512362 43512462 -41926018 - L1ME4a LINE L1 -1 6120 6015 660 200 0 8 chr17 43512519 43512639 -41925841 + FLAM_C SINE Alu 2 120 -23 2377 81 0 32 chr17 43512659 43512967 -41925513 + AluY SINE Alu 1 298 -13 2069 146 7 0 chr17 43512971 43513265 -41925215 + AluSx SINE Alu 1 296 -16 2620 50 0 3 chr17 43513267 43513568 -41924912 + AluY SINE Alu 1 300 -11 1929 163 3 7 chr17 43513570 43513877 -41924603 + AluJb SINE Alu 1 306 -6 1702 167 4 4 chr17 43514005 43514269 -41924211 - AluJo SINE Alu -48 264 1 2228 121 10 0 chr17 43514306 43514612 -41923868 - AluSg SINE Alu -1 309 1 1355 129 33 132 chr17 43514736 43514878 -41923602 + AluJo SINE Alu 2 156 -146 2036 113 76 0 chr17 43514878 43515153 -41923327 + AluSx SINE Alu 1 296 -16 2325 105 10 0 chr17 43515155 43515460 -41923020 + AluSp SINE Alu 1 308 -5 2108 108 7 11 chr17 43515464 43515802 -41922678 + AluSx SINE Alu 1 337 0 1355 129 33 132 chr17 43515802 43515962 -41922518 + AluJo SINE Alu 160 282 -20 222 37 0 0 chr17 43515962 43515989 -41922491 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1355 129 33 132 chr17 43515989 43516008 -41922472 + AluJo SINE Alu 282 301 -1 301 355 46 50 chr17 43516093 43516375 -41922105 - L2 LINE L2 -5 3267 2987 1733 171 34 7 chr17 43516391 43516689 -41921791 + AluJb SINE Alu 1 306 -6 2112 133 0 0 chr17 43518201 43518494 -41919986 - AluSx SINE Alu -19 293 1 2278 107 3 7 chr17 43519053 43519362 -41919118 - AluSg SINE Alu -2 308 1 415 209 9 9 chr17 43519572 43519682 -41918798 + Charlie5 DNA MER1_type 2393 2502 -110 2026 114 26 23 chr17 43519683 43519991 -41918489 - AluSg SINE Alu -1 309 1 999 156 40 0 chr17 43520016 43520189 -41918291 + AluSg/x SINE Alu 133 312 0 730 191 102 0 chr17 43520195 43520342 -41918138 + FRAM SINE Alu 2 163 -3 183 156 0 0 chr17 43520399 43520431 -41918049 + T-rich Low_complexity Low_complexity 1 32 0 1068 172 0 69 chr17 43520447 43520504 -41917976 - AluJo SINE Alu -122 190 131 2397 81 3 3 chr17 43520504 43520800 -41917680 - AluSg SINE Alu -14 296 1 1068 172 0 69 chr17 43520800 43520946 -41917534 - AluJo SINE Alu -181 131 1 2283 105 7 0 chr17 43521328 43521623 -41916857 - AluSx SINE Alu -15 297 1 227 330 134 10 chr17 43521792 43521986 -41916494 + L3b LINE CR1 1152 1369 -214 269 221 256 12 chr17 43525668 43525754 -41912726 + MIR3 SINE MIR 52 158 -50 412 275 84 30 chr17 43525793 43525960 -41912520 - Charlie8 DNA MER1_type -2136 281 106 2429 91 10 0 chr17 43525988 43526296 -41912184 - AluSx SINE Alu -1 311 1 2215 117 16 0 chr17 43530584 43530892 -41907588 - AluSq SINE Alu 0 313 1 308 222 30 111 chr17 43533245 43533380 -41905100 + MIR3 SINE MIR 33 156 -52 1080 117 12 35 chr17 43533390 43533561 -41904919 - AluSg/x SINE Alu -12 300 134 1963 93 11 7 chr17 43533561 43533850 -41904630 - AluSq SINE Alu 0 313 22 341 225 12 0 chr17 43533917 43533997 -41904483 - MIR SINE MIR 0 262 182 782 273 51 14 chr17 43536038 43536254 -41902226 - MIR SINE MIR -8 254 31 198 300 32 24 chr17 43536610 43536713 -41901767 + MIR SINE MIR 56 161 -47 2117 116 10 7 chr17 43537325 43537628 -41900852 - AluSg1 SINE Alu -4 305 2 23 0 0 0 chr17 43537636 43537659 -41900821 + AT_rich Low_complexity Low_complexity 1 23 0 852 153 0 0 chr17 43537659 43537783 -41900697 - FLAM_C SINE Alu -9 124 1 232 256 84 77 chr17 43537974 43538142 -41900338 - MIR SINE MIR -57 205 25 254 350 0 20 chr17 43538324 43538424 -41900056 + MER5A DNA MER1_type 63 160 -29 254 304 59 29 chr17 43538727 43538791 -41899689 + MIR SINE MIR 87 157 -105 2013 113 26 22 chr17 43538791 43539102 -41899378 + AluSx SINE Alu 1 312 0 254 304 59 29 chr17 43539102 43539139 -41899341 + MIR SINE MIR 157 191 -71 182 125 0 25 chr17 43539471 43539511 -41898969 + (CCCA)n Simple_repeat Simple_repeat 1 39 0 510 349 42 0 chr17 43539889 43540081 -41898399 - MIR SINE MIR -34 228 29 397 286 119 24 chr17 43540644 43540689 -41897791 - MER91A DNA MER1_type -12 184 145 2303 113 0 0 chr17 43540689 43540998 -41897482 + AluSx SINE Alu 1 309 -3 397 286 119 24 chr17 43540998 43541120 -41897360 - MER91A DNA MER1_type -51 145 1 515 250 94 39 chr17 43541303 43541531 -41896949 + MIR SINE MIR 13 259 -3 1565 159 0 19 chr17 43541542 43541813 -41896667 - AluJo SINE Alu -2 310 45 330 256 12 12 chr17 43541982 43542064 -41896416 - MIR SINE MIR -102 160 79 509 222 50 78 chr17 43542477 43542583 -41895897 + MIR SINE MIR 59 159 -103 2211 98 0 3 chr17 43542583 43542888 -41895592 + AluSp SINE Alu 2 305 -8 509 222 50 78 chr17 43542888 43542961 -41895519 + MIR SINE MIR 159 233 -29 29 47 0 0 chr17 43545394 43545437 -41893043 + GC_rich Low_complexity Low_complexity 1 43 0 339 233 58 0 chr17 43545528 43545668 -41892812 + G-rich Low_complexity Low_complexity 1 148 0 39 38 0 0 chr17 43545765 43545818 -41892662 + GC_rich Low_complexity Low_complexity 1 53 0 474 247 26 21 chr17 43547121 43547293 -41891187 - MIR SINE MIR -60 148 15 2357 55 3 29 chr17 43547750 43548060 -41890420 - AluY SINE Alu -9 302 1 1581 132 31 116 chr17 43548071 43548398 -41890082 - AluSx SINE Alu -3 299 1 2240 61 3 55 chr17 43548409 43548737 -41889743 - AluY SINE Alu 0 311 1 1982 76 57 4 chr17 43548737 43549001 -41889479 - AluSp SINE Alu -35 278 1 2085 116 0 3 chr17 43549003 43549295 -41889185 - AluSx SINE Alu -1 311 21 1365 150 55 15 chr17 43549303 43549460 -41889020 - AluJb SINE Alu -13 299 150 2270 95 0 10 chr17 43549460 43549765 -41888715 - AluSx SINE Alu -9 303 2 1365 150 55 15 chr17 43549765 43549845 -41888635 - AluJb SINE Alu -162 150 47 1759 64 0 0 chr17 43549845 43550063 -41888417 + AluY SINE Alu 1 218 -93 1365 150 55 15 chr17 43550063 43550097 -41888383 - AluJb SINE Alu -265 47 16 747 157 0 45 chr17 43550118 43550252 -41888228 - FLAM_C SINE Alu -5 128 1 600 304 46 29 chr17 43550958 43551198 -41887282 + MIR SINE MIR 2 245 -17 255 350 58 0 chr17 43551870 43551973 -41886507 - MIR SINE MIR -13 249 141 2196 73 14 10 chr17 43551973 43552285 -41886195 - AluSx SINE Alu 0 312 1 442 271 38 15 chr17 43552445 43552578 -41885902 - MIR3 SINE MIR -9 199 64 276 100 0 0 chr17 43555417 43555457 -41883023 + (CTGGGG)n Simple_repeat Simple_repeat 2 41 0 2180 107 7 0 chr17 43557865 43558164 -41880316 - AluSx SINE Alu -6 306 6 2104 104 0 73 chr17 43558452 43558780 -41879700 - AluSx SINE Alu -8 304 1 210 309 134 0 chr17 43558783 43558880 -41879600 + L2 LINE L2 2253 2362 -952 431 271 35 108 chr17 43558883 43558992 -41879488 + L1M4 LINE L1 5083 5198 -948 2219 125 46 25 chr17 43558992 43559359 -41879121 + THE1C LTR MaLR 1 375 0 431 271 35 108 chr17 43559359 43559475 -41879005 + L1M4 LINE L1 5198 5289 -857 1593 141 0 0 chr17 43559475 43559702 -41878778 + AluJb SINE Alu 2 228 -84 431 271 35 108 chr17 43559702 43559733 -41878747 + L1M4 LINE L1 5289 5321 -825 882 287 99 37 chr17 43559740 43560276 -41878204 + L1MC/D LINE L1 5254 5822 -1986 1764 182 3 0 chr17 43560279 43560576 -41877904 - AluSx SINE Alu -14 298 1 22 0 0 0 chr17 43560578 43560600 -41877880 + AT_rich Low_complexity Low_complexity 1 22 0 688 86 0 11 chr17 43560625 43560718 -41877762 - FLAM_C SINE Alu -34 109 18 2047 119 7 3 chr17 43560798 43561101 -41877379 + AluSg SINE Alu 1 304 -6 42 65 0 0 chr17 43561303 43561380 -41877100 + AT_rich Low_complexity Low_complexity 1 77 0 388 293 11 85 chr17 43562015 43562129 -41876351 - MER5A DNA MER1_type -9 180 84 1569 159 0 80 chr17 43562129 43562274 -41876206 - AluJo SINE Alu -34 278 168 2117 109 3 26 chr17 43562274 43562585 -41875895 - AluSx SINE Alu -8 304 1 1569 159 0 80 chr17 43562585 43562741 -41875739 - AluJo SINE Alu -144 168 1 388 293 11 85 chr17 43562741 43562814 -41875666 - MER5A DNA MER1_type -105 84 7 2499 44 7 0 chr17 43563556 43563852 -41874628 - AluY SINE Alu -13 298 1 390 314 45 19 chr17 43563871 43564056 -41874424 - MIR3 SINE MIR -33 175 6 1924 129 31 0 chr17 43564644 43564930 -41873550 + AluSx SINE Alu 1 295 -17 24 32 0 0 chr17 43565425 43565456 -41873024 + AT_rich Low_complexity Low_complexity 1 31 0 407 313 26 20 chr17 43565588 43565781 -41872699 + MIR3 SINE MIR 5 195 -60 194 270 40 27 chr17 43568120 43568194 -41870286 + MIR SINE MIR 3 77 -185 323 284 18 107 chr17 43568358 43568422 -41870058 + L1MC4a LINE L1 6944 7012 -796 1880 164 0 6 chr17 43568422 43568734 -41869746 + AluJo SINE Alu 1 310 -2 323 284 18 107 chr17 43568734 43568838 -41869642 + L1MC4a LINE L1 7012 7097 -711 2106 105 17 0 chr17 43569020 43569315 -41869165 - AluSx SINE Alu -12 300 1 1995 123 20 0 chr17 43569591 43569884 -41868596 - AluSx SINE Alu -13 299 1 407 203 220 8 chr17 43571391 43571509 -41866971 + MIR SINE MIR 83 225 -37 2573 37 0 0 chr17 43571524 43571822 -41866658 - AluY SINE Alu -13 298 1 2299 88 0 0 chr17 43571825 43572120 -41866360 - AluSg SINE Alu -15 295 1 2046 129 24 0 chr17 43573083 43573378 -41865102 - AluSx SINE Alu -10 302 1 223 301 57 49 chr17 43573484 43573607 -41864873 + MIR SINE MIR 61 184 -78 321 26 0 0 chr17 43574978 43575016 -41863464 + (TG)n Simple_repeat Simple_repeat 2 39 0 1507 192 30 26 chr17 43575188 43575490 -41862990 + AluJo SINE Alu 1 303 -9 243 157 0 0 chr17 43575490 43575541 -41862939 + L1MB3 LINE L1 6133 6183 0 2143 125 3 0 chr17 43575571 43575876 -41862604 - AluSx SINE Alu -3 309 4 2057 95 0 0 chr17 43575893 43576157 -41862323 - AluSc SINE Alu -45 264 1 716 251 146 54 chr17 43576234 43576676 -41861804 + MLT1H LTR MaLR 1 498 -51 1981 103 0 60 chr17 43576676 43577005 -41861475 + AluSq SINE Alu 1 311 0 716 251 146 54 chr17 43577005 43577060 -41861420 + MLT1H LTR MaLR 498 547 -2 2039 133 10 7 chr17 43577252 43577554 -41860926 - AluSx SINE Alu -9 303 1 2268 109 0 0 chr17 43577569 43577873 -41860607 - AluSx SINE Alu -8 304 1 251 329 77 0 chr17 43577874 43578120 -41860360 + L1MB7 LINE L1 5638 5902 -219 780 199 0 0 chr17 43578129 43578260 -41860220 + FLAM_C SINE Alu 2 132 -1 459 0 0 0 chr17 43578354 43578405 -41860075 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2289 97 3 0 chr17 43578409 43578709 -41859771 + AluSp SINE Alu 1 301 -12 1760 172 3 7 chr17 43578710 43579018 -41859462 + AluJb SINE Alu 1 307 -5 882 163 4 104 chr17 43579039 43579290 -41859190 + L1MB7 LINE L1 5951 6176 -8 1759 157 10 45 chr17 43579386 43579560 -41858920 - AluJo SINE Alu -10 302 142 2297 99 3 0 chr17 43579560 43579864 -41858616 - AluSp SINE Alu -7 306 2 1759 157 10 45 chr17 43579864 43580002 -41858478 - AluJo SINE Alu -170 142 1 2321 74 0 7 chr17 43580021 43580319 -41858161 + AluY SINE Alu 1 296 -15 1520 151 126 11 chr17 43580319 43580584 -41857896 - AluJb SINE Alu -6 296 1 1557 160 38 31 chr17 43580584 43580871 -41857609 - AluJb SINE Alu -23 289 1 1817 171 0 16 chr17 43580918 43581228 -41857252 - AluSx SINE Alu -7 305 1 2028 117 3 3 chr17 43581296 43581586 -41856894 + AluSg SINE Alu 2 291 -19 2223 101 3 0 chr17 43582541 43582847 -41855633 - AluSp SINE Alu -6 307 1 1843 156 0 0 chr17 43583181 43583469 -41855011 + AluSx SINE Alu 1 288 -24 1825 137 10 23 chr17 43583536 43583836 -41854644 + AluSx SINE Alu 1 296 -16 1401 171 25 0 chr17 43583839 43584084 -41854396 + L1MB8 LINE L1 5484 5734 -444 2444 160 29 5 chr17 43584984 43585427 -41853053 + L1MB8 LINE L1 5725 6178 0 2108 116 0 0 chr17 43585436 43585728 -41852752 + AluSc SINE Alu 1 292 -17 1041 101 14 0 chr17 43585728 43585876 -41852604 - AluSg/x SINE Alu -18 294 145 1977 205 114 41 chr17 43585912 43586261 -41852219 + L1MC4a LINE L1 7181 7503 -305 2275 65 24 3 chr17 43586261 43586551 -41851929 - AluSc SINE Alu -13 296 1 1977 205 114 41 chr17 43586551 43586653 -41851827 + L1MC4a LINE L1 7503 7596 -212 1813 146 3 38 chr17 43586653 43586968 -41851512 - AluJb SINE Alu -8 304 1 2076 116 3 7 chr17 43586975 43587276 -41851204 - AluSx SINE Alu -12 300 1 1977 205 114 41 chr17 43587276 43587400 -41851080 + L1MC4a LINE L1 7601 7808 0 256 292 77 27 chr17 43587388 43587648 -41850832 + L1MEd LINE L1 939 1211 -4908 * 482 250 179 26 chr17 43587625 43587977 -41850503 + HAL1 LINE L1 -16 389 -2101 1143 206 5 9 chr17 43587989 43588207 -41850273 + MER20 DNA MER1_type 3 219 0 374 301 15 22 chr17 43588207 43588343 -41850137 + HAL1 LINE L1 468 602 -1888 411 246 67 56 chr17 43688385 43688564 -41749916 - MIR3 SINE MIR -4 204 24 623 122 28 0 chr17 43689160 43689267 -41749213 + MIR SINE MIR 29 138 -124 203 146 24 0 chr17 43689623 43689664 -41748816 + GA-rich Low_complexity Low_complexity 3 44 0 740 185 15 22 chr17 43689912 43690047 -41748433 + AluJo SINE Alu 2 135 -177 1445 167 56 42 chr17 43690048 43690354 -41748126 + AluJo SINE Alu 2 311 -1 1782 131 69 0 chr17 43690358 43690633 -41747847 + AluSg SINE Alu 1 294 -16 1651 195 52 24 chr17 43691000 43691328 -41747152 - MER58B DNA MER1_type -1 340 4 222 341 134 30 chr17 43691334 43691498 -41746982 - L3b LINE CR1 -24 1559 1379 214 333 213 13 chr17 43691580 43691805 -41746675 - L3b LINE CR1 -202 1381 1112 24 53 0 0 chr17 43692154 43692192 -41746288 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr17 43692386 43692414 -41746066 + AT_rich Low_complexity Low_complexity 1 28 0 486 308 87 20 chr17 43692746 43692941 -41745539 - Charlie8 DNA MER1_type -2207 210 3 222 234 21 0 chr17 43692953 43693000 -41745480 + MIR SINE MIR 47 94 -114 205 150 0 25 chr17 43693246 43693286 -41745194 + MER5A DNA MER1_type 36 74 -115 2473 63 13 0 chr17 43693287 43693586 -41744894 + AluSp SINE Alu 1 303 -10 805 158 8 23 chr17 43693597 43693730 -41744750 + FLAM_C SINE Alu 1 131 -2 2327 94 7 3 chr17 43693799 43694106 -41744374 - AluSq SINE Alu -5 308 1 544 60 0 24 chr17 43694502 43694585 -41743895 + (TTC)n Simple_repeat Simple_repeat 1 81 0 1172 168 0 37 chr17 43694610 43694824 -41743656 - AluJo SINE Alu -106 206 1 1112 127 0 18 chr17 43694986 43695151 -41743329 + AluSq SINE Alu 131 292 -21 1016 138 0 48 chr17 43695313 43695480 -41743000 + FRAM SINE Alu 5 163 -13 200 254 111 0 chr17 43695488 43695551 -41742929 - MIR SINE MIR -111 151 82 2242 102 7 14 chr17 43695643 43695938 -41742542 + AluSg SINE Alu 1 293 -17 2147 125 0 3 chr17 43695964 43696261 -41742219 + AluSx SINE Alu 1 296 -16 223 273 113 87 chr17 43696485 43696525 -41741955 - MIR3 SINE MIR -21 187 150 2315 69 3 3 chr17 43696525 43696815 -41741665 - AluY SINE Alu -21 290 1 223 273 113 87 chr17 43696815 43696855 -41741625 - MIR3 SINE MIR -58 150 113 1606 176 10 55 chr17 43696855 43697162 -41741318 + AluJo SINE Alu 6 298 -14 223 273 113 87 chr17 43697162 43697230 -41741250 - MIR3 SINE MIR -95 113 34 2236 96 6 29 chr17 43697294 43697607 -41740873 + AluSq SINE Alu 1 306 -7 1984 133 0 3 chr17 43698324 43698609 -41739871 - AluSq SINE Alu -29 284 1 1785 183 6 16 chr17 43699126 43699437 -41739043 + AluJb SINE Alu 1 308 -4 1575 184 23 23 chr17 43699999 43700304 -41738176 - AluJo SINE Alu -7 305 1 1716 170 10 7 chr17 43700336 43700625 -41737855 + AluJb SINE Alu 1 290 -22 222 255 39 0 chr17 43700889 43700940 -41737540 + L2 LINE L2 3194 3246 -26 270 81 0 0 chr17 43700940 43700977 -41737503 + (TC)n Simple_repeat Simple_repeat 2 38 0 263 148 37 0 chr17 43700985 43701039 -41737441 - L1MC4 LINE L1 -1339 6703 6648 198 0 0 0 chr17 43701040 43701062 -41737418 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2230 92 3 0 chr17 43701068 43701351 -41737129 - AluSq SINE Alu -27 286 3 2169 96 4 0 chr17 43701378 43701658 -41736822 - AluSq SINE Alu -32 281 1 2144 97 10 10 chr17 43701952 43702240 -41736240 + AluSc SINE Alu 1 288 -21 758 152 106 15 chr17 43702541 43702673 -41735807 + AluJb SINE Alu 150 293 -19 27 0 0 0 chr17 43702930 43702957 -41735523 + AT_rich Low_complexity Low_complexity 1 27 0 2331 87 7 0 chr17 43703018 43703316 -41735164 + AluSp SINE Alu 1 300 -13 216 0 0 0 chr17 43703458 43703482 -41734998 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 204 143 29 0 chr17 43705501 43705536 -41732944 + (TATATG)n Simple_repeat Simple_repeat 2 37 0 29 0 0 0 chr17 43705765 43705794 -41732686 + AT_rich Low_complexity Low_complexity 1 29 0 308 317 30 10 chr17 43706824 43706925 -41731555 - MIR SINE MIR -137 125 23 2343 95 0 22 chr17 43707045 43707360 -41731120 - AluSq SINE Alu -5 308 1 2268 112 0 10 chr17 43707384 43707697 -41730783 + AluSq SINE Alu 2 311 -2 283 235 118 29 chr17 43708202 43708304 -41730176 + MIR SINE MIR 134 244 -18 251 250 16 16 chr17 43708341 43708385 -41730095 + AluS SINE Alu 1 44 -259 226 211 0 0 chr17 43708385 43708423 -41730057 + AluJ/monomer SINE Alu 1 38 -261 500 19 0 0 chr17 43708424 43708477 -41730003 - AluSq/x SINE Alu -192 120 68 1231 155 0 5 chr17 43708478 43708678 -41729802 - AluSx SINE Alu -113 199 1 435 289 158 33 chr17 43708801 43708932 -41729548 + L2 LINE L2 1805 1918 -1396 1916 111 39 7 chr17 43708932 43709242 -41729238 - AluSx SINE Alu 0 320 2 435 289 158 33 chr17 43709242 43709445 -41729035 + L2 LINE L2 1918 2182 -1132 498 348 127 4 chr17 43709498 43709774 -41728706 + L2 LINE L2 3004 3313 0 1183 171 93 35 chr17 43709974 43710232 -41728248 + AluJo SINE Alu 1 273 -39 25 0 0 0 chr17 43711027 43711052 -41727428 + AT_rich Low_complexity Low_complexity 1 25 0 1447 184 20 0 chr17 43711167 43711412 -41727068 - AluJo SINE Alu -23 289 40 265 233 14 14 chr17 43711427 43711500 -41726980 - HAL1 LINE L1 0 2507 2435 25 0 0 0 chr17 43711532 43711557 -41726923 + AT_rich Low_complexity Low_complexity 1 25 0 2191 125 6 10 chr17 43711699 43712011 -41726469 - AluSx SINE Alu -1 311 1 372 224 9 35 chr17 43712034 43712150 -41726330 - L1MB4 LINE L1 -1 6179 6067 2153 86 3 40 chr17 43712150 43712454 -41726026 + AluSx SINE Alu 1 293 -19 1848 162 100 64 chr17 43712460 43712941 -41725539 - L1M4 LINE L1 -2049 4097 3600 222 136 0 0 chr17 43713011 43713055 -41725425 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 1082 93 33 0 chr17 43713070 43713220 -41725260 - AluSg/x SINE Alu -24 288 134 2057 125 10 0 chr17 43713220 43713387 -41725093 - AluSx SINE Alu -14 298 134 198 0 0 0 chr17 43713387 43713409 -41725071 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 333 0 0 0 chr17 43713413 43713450 -41725030 + (TG)n Simple_repeat Simple_repeat 2 38 0 2057 125 10 0 chr17 43713450 43713565 -41724915 - AluSx SINE Alu -180 132 8 241 103 0 0 chr17 43713570 43713609 -41724871 - L1ME3A LINE L1 -220 5950 5912 2420 52 14 0 chr17 43713951 43714240 -41724240 - AluY SINE Alu -18 293 1 228 125 0 0 chr17 43714269 43714301 -41724179 - AluJb SINE Alu -13 289 258 1902 144 14 4 chr17 43714301 43714579 -41723901 - AluJb SINE Alu -31 281 1 2266 110 0 7 chr17 43714590 43714889 -41723591 - AluSx SINE Alu -15 297 1 1274 162 0 5 chr17 43714909 43715100 -41723380 - AluJo SINE Alu -122 190 1 293 82 20 0 chr17 43715145 43715194 -41723286 + (TGGA)n Simple_repeat Simple_repeat 4 53 0 25 31 0 0 chr17 43715749 43715781 -41722699 + AT_rich Low_complexity Low_complexity 1 32 0 1326 171 0 5 chr17 43715807 43716018 -41722462 + AluJb SINE Alu 85 294 -18 266 239 0 15 chr17 43716060 43716127 -41722353 - L1MC4 LINE L1 -1340 6702 6637 * 375 250 119 54 chr17 43716119 43716206 -41722274 - HAL1b LINE L1 -813 535 455 339 44 0 0 chr17 43716206 43716251 -41722229 + (GA)n Simple_repeat Simple_repeat 1 45 0 375 250 119 54 chr17 43716251 43716423 -41722057 - HAL1b LINE L1 -893 455 259 2080 138 0 3 chr17 43716475 43716779 -41721701 - AluJb SINE Alu -9 303 1 1521 195 8 0 chr17 43717271 43717538 -41720942 + AluJb SINE Alu 1 269 -43 788 123 0 9 chr17 43718276 43718390 -41720090 - MER46A DNA MER2_type 0 236 124 1969 89 100 0 chr17 43719843 43720113 -41718367 - AluSg SINE Alu -13 297 1 2395 35 42 3 chr17 43720322 43720605 -41717875 + AluY SINE Alu 1 294 -17 1613 166 19 45 chr17 43720610 43720923 -41717557 + AluJo SINE Alu 1 305 -7 1927 169 10 3 chr17 43721075 43721383 -41717097 + AluSx SINE Alu 1 310 -2 2121 124 7 0 chr17 43721436 43721727 -41716753 + AluSx SINE Alu 1 293 -19 1761 127 34 4 chr17 43721889 43722156 -41716324 + AluSx SINE Alu 24 298 -14 875 192 69 20 chr17 43722418 43722621 -41715859 + MER20 DNA MER1_type 6 218 -1 1525 161 3 119 chr17 43723194 43723529 -41714951 + AluJo SINE Alu 3 298 -4 2335 71 7 3 chr17 43724267 43724561 -41713919 + AluSc SINE Alu 1 295 -14 234 150 0 0 chr17 43724815 43724855 -41713625 + (TCCC)n Simple_repeat Simple_repeat 3 42 0 205 243 0 0 chr17 43724855 43724892 -41713588 + polypyrimidine Low_complexity Low_complexity 2 38 0 697 240 90 75 chr17 43724989 43725310 -41713170 + MER102a DNA MER1_type 2 327 -3 1166 163 0 21 chr17 43725499 43725689 -41712791 + AluJb SINE Alu 1 186 -126 698 161 0 36 chr17 43725873 43725985 -41712495 + AluSg/x SINE Alu 188 295 -17 2028 116 3 30 chr17 43726707 43727010 -41711470 + AluSx SINE Alu 1 295 -17 1316 191 30 9 chr17 43727481 43727712 -41710768 + MER46A DNA MER2_type 1 236 0 3444 168 60 12 chr17 43727734 43728412 -41710068 + L1MB8 LINE L1 5427 6137 -41 1577 161 28 14 chr17 43728414 43728699 -41709781 + AluJo SINE Alu 1 289 -23 332 238 9 0 chr17 43728836 43728949 -41709531 - L1MC4 LINE L1 -1340 6982 1995 1868 144 43 0 chr17 43729098 43729375 -41709105 + AluSx SINE Alu 1 289 -23 1118 114 38 0 chr17 43729375 43729533 -41708947 + AluSg/x SINE Alu 134 297 -15 261 162 0 0 chr17 43729537 43729574 -41708906 + Alu SINE Alu 1 37 -263 1142 149 0 0 chr17 43729575 43729749 -41708731 + AluSg/x SINE Alu 129 302 -10 1411 167 26 79 chr17 43730305 43730334 -41708146 - AluJo SINE Alu -12 300 271 2213 119 10 0 chr17 43730334 43730637 -41707843 + AluSx SINE Alu 1 306 -6 1411 167 26 79 chr17 43730637 43730795 -41707685 - AluJo SINE Alu -41 271 133 2305 95 0 0 chr17 43730795 43731080 -41707400 + AluSp SINE Alu 1 285 -28 1411 167 26 79 chr17 43731080 43731196 -41707284 - AluJo SINE Alu -179 133 12 184 337 47 77 chr17 43731203 43731372 -41707108 - L2 LINE L2 -9 3263 3100 188 375 39 29 chr17 43733120 43733224 -41705256 - L2 LINE L2 -6 3266 3162 303 316 139 6 chr17 43733254 43733412 -41705068 - MIR SINE MIR -49 213 35 1944 159 3 7 chr17 43733659 43733968 -41704512 + 7SLRNA srpRNA srpRNA 1 308 -12 207 291 205 34 chr17 43733975 43734092 -41704388 + L3b LINE CR1 1434 1570 -13 1971 134 0 10 chr17 43734535 43734833 -41703647 + AluSx SINE Alu 5 299 -13 2107 130 0 0 chr17 43735061 43735360 -41703120 + AluSx SINE Alu 1 299 -13 229 263 0 0 chr17 43735676 43735733 -41702747 + T-rich Low_complexity Low_complexity 3 59 0 25 90 0 0 chr17 43737144 43737211 -41701269 + AT_rich Low_complexity Low_complexity 1 67 0 2357 72 0 0 chr17 43737217 43737510 -41700970 + AluY SINE Alu 2 294 -17 2417 66 3 0 chr17 43737512 43737813 -41700667 + AluSp SINE Alu 1 302 -11 2663 97 66 21 chr17 43737827 43738251 -41700229 - L1MA5A LINE L1 -2 6295 5853 513 268 85 6 chr17 43738352 43738516 -41699964 + MIR SINE MIR 73 249 -13 1852 155 0 17 chr17 43738578 43738875 -41699605 + AluJb SINE Alu 2 293 -19 2216 117 0 0 chr17 43739026 43739334 -41699146 + AluSq SINE Alu 1 308 -5 1365 176 20 47 chr17 43739507 43739647 -41698833 + AluJo SINE Alu 7 149 -163 2057 106 10 3 chr17 43739647 43739940 -41698540 + AluSc SINE Alu 1 295 -14 1365 176 20 47 chr17 43739940 43740095 -41698385 + AluJo SINE Alu 149 294 -18 739 191 0 8 chr17 43740387 43740518 -41697962 - FLAM_C SINE Alu -2 131 2 2258 87 0 16 chr17 43740671 43740980 -41697500 - AluSg SINE Alu -6 304 1 2176 121 0 6 chr17 43740985 43741298 -41697182 - AluSx SINE Alu -1 311 1 1041 107 47 0 chr17 43748602 43748751 -41689729 + AluSg/x SINE Alu 126 281 -31 207 0 0 0 chr17 43748755 43748778 -41689702 + (CA)n Simple_repeat Simple_repeat 1 23 0 2098 114 6 35 chr17 43748797 43749112 -41689368 + AluSx SINE Alu 1 306 -6 2038 109 14 7 chr17 43749114 43749407 -41689073 + AluSg SINE Alu 1 295 -15 1765 172 3 3 chr17 43749886 43750182 -41688298 + AluJo SINE Alu 1 296 -16 2029 129 10 16 chr17 43750254 43750565 -41687915 - AluSp SINE Alu -3 310 2 234 0 0 0 chr17 43750565 43750591 -41687889 + (A)n Simple_repeat Simple_repeat 1 26 0 1567 187 18 0 chr17 43750591 43750874 -41687606 - AluJo SINE Alu -22 290 3 2233 116 0 0 chr17 43750898 43751208 -41687272 - AluSg SINE Alu 0 310 1 196 318 18 55 chr17 43751208 43751318 -41687162 + L2 LINE L2 2736 2841 -473 479 270 34 12 chr17 43751429 43751597 -41686883 + MIR SINE MIR 13 181 -63 804 174 0 14 chr17 43751748 43751886 -41686594 - AluJo SINE Alu -176 136 1 205 276 138 52 chr17 43752062 43752178 -41686302 - L2 LINE L2 -4 3309 3184 389 278 129 26 chr17 43753135 43753329 -41685151 - L2 LINE L2 -639 2675 2462 2442 61 0 49 chr17 43754054 43754202 -41684278 + AluSp SINE Alu 1 155 -158 2247 99 0 0 chr17 43754202 43754495 -41683985 + AluSg SINE Alu 1 293 -17 2442 61 0 49 chr17 43754495 43754675 -41683805 + AluSp SINE Alu 155 313 0 519 228 53 0 chr17 43754951 43755065 -41683415 + LTR16A LTR ERVL 82 201 -249 2359 77 3 3 chr17 43755162 43755473 -41683007 - AluSp SINE Alu 0 313 3 2423 76 0 0 chr17 43755475 43755778 -41682702 - AluSq SINE Alu -10 303 1 576 238 77 12 chr17 43755778 43755946 -41682534 + LTR16A LTR ERVL 228 406 -44 1047 210 134 11 chr17 43755958 43756220 -41682260 + AluJb SINE Alu 1 294 -8 184 247 27 68 chr17 43756250 43756323 -41682157 - MIR SINE MIR -20 242 173 347 350 8 0 chr17 43756641 43756761 -41681719 + MIR3 SINE MIR 52 172 -36 201 325 42 33 chr17 43758251 43758371 -41680109 + MIR3 SINE MIR 66 186 -22 581 317 177 30 chr17 43759596 43760340 -41678140 - L2 LINE L2 -558 2756 1903 1082 151 0 17 chr17 43760340 43760519 -41677961 + AluSg/x SINE Alu 137 312 0 346 325 19 6 chr17 43760540 43760700 -41677780 - L2 LINE L2 -1406 1908 1747 1666 167 31 3 chr17 43761089 43761376 -41677104 + AluJo SINE Alu 1 295 -17 2142 103 0 0 chr17 43761391 43761682 -41676798 + AluSx SINE Alu 5 295 -17 2173 103 0 10 chr17 43763462 43763763 -41674717 + AluSx SINE Alu 1 298 -14 2234 56 7 36 chr17 43763763 43764067 -41674413 + AluY SINE Alu 1 296 -15 229 273 37 75 chr17 43764777 43764964 -41673516 - L1ME4a LINE L1 0 6121 5942 336 294 20 68 chr17 43765367 43765513 -41672967 + MIR SINE MIR 18 156 -106 2270 102 0 0 chr17 43765513 43765817 -41672663 + AluSg SINE Alu 1 304 -6 2071 97 0 42 chr17 43766094 43766405 -41672075 + AluSx SINE Alu 1 298 -14 2183 102 0 0 chr17 43768811 43769105 -41669375 + AluSx SINE Alu 11 304 -8 2138 99 27 0 chr17 43769570 43769862 -41668618 + AluSg SINE Alu 1 300 -10 720 173 68 62 chr17 43769870 43770032 -41668448 + AluJo SINE Alu 42 204 -108 2004 115 27 0 chr17 43770085 43770380 -41668100 + AluSx SINE Alu 1 303 -9 2244 108 3 0 chr17 43771011 43771318 -41667162 + AluSp SINE Alu 1 308 -5 2017 124 16 0 chr17 43771441 43771748 -41666732 - AluSx SINE Alu 0 312 1 1577 140 0 116 chr17 43772133 43772300 -41666180 + AluJo SINE Alu 1 113 -189 2135 99 0 3 chr17 43772300 43772593 -41665887 + AluSq SINE Alu 3 294 -19 1577 140 0 116 chr17 43772593 43772753 -41665727 + AluJo SINE Alu 113 290 -12 28 0 0 0 chr17 43772755 43772783 -41665697 + AT_rich Low_complexity Low_complexity 1 28 0 5588 110 111 117 chr17 43772800 43774366 -41664114 - pTR5 LTR ERV1 0 2438 743 1159 245 89 50 chr17 43774366 43774551 -41663929 - L2 LINE L2 -32 3281 3105 2162 88 10 0 chr17 43774551 43774848 -41663632 + AluSq SINE Alu 1 300 -13 285 51 0 0 chr17 43774848 43774887 -41663593 + (TA)n Simple_repeat Simple_repeat 1 39 0 1159 245 89 50 chr17 43774887 43775200 -41663280 - L2 LINE L2 -207 3106 2745 975 318 116 60 chr17 43775416 43775839 -41662641 + L3 LINE CR1 423 821 -756 2256 93 0 6 chr17 43775839 43776152 -41662328 + AluY SINE Alu 1 311 0 975 318 116 60 chr17 43776152 43776696 -41661784 + L3 LINE CR1 821 1444 -133 425 228 50 83 chr17 43776708 43776888 -41661592 - MIR SINE MIR 0 262 89 2017 113 11 7 chr17 43776905 43777189 -41661291 + AluSq SINE Alu 1 285 -28 2371 71 0 0 chr17 43778124 43778418 -41660062 + AluSx SINE Alu 15 308 -4 25 51 0 0 chr17 43779021 43779060 -41659420 + GC_rich Low_complexity Low_complexity 1 39 0 206 243 14 27 chr17 43779152 43779226 -41659254 + (CGGGG)n Simple_repeat Simple_repeat 2 74 0 323 299 68 0 chr17 43781150 43781267 -41657213 + MIR SINE MIR 96 220 -42 514 218 88 41 chr17 43782333 43782456 -41656024 + MIR SINE MIR 16 151 -111 709 216 40 23 chr17 43782456 43782632 -41655848 - MER104 DNA MER2_type -1 179 1 514 218 88 41 chr17 43782632 43782678 -41655802 + MIR SINE MIR 151 193 -69 473 284 132 16 chr17 43783429 43783619 -41654861 + MIR SINE MIR 47 258 -4 340 296 45 45 chr17 43783788 43783967 -41654513 - L2 LINE L2 -6 3266 3088 1922 127 26 10 chr17 43784245 43784552 -41653928 - AluSq SINE Alu -1 312 1 180 278 72 21 chr17 43784746 43784843 -41653637 + L2 LINE L2 2915 3016 -256 775 261 86 4 chr17 43784923 43785157 -41653323 + MIR SINE MIR 6 258 -4 432 0 0 0 chr17 43785204 43785252 -41653228 + (CA)n Simple_repeat Simple_repeat 2 49 0 663 207 11 37 chr17 43785260 43785289 -41653191 - MER3 DNA MER1_type -5 204 176 180 77 0 0 chr17 43785289 43785315 -41653165 + (TTAAA)n Simple_repeat Simple_repeat 5 30 0 2219 96 0 0 chr17 43785325 43785616 -41652864 - AluSg SINE Alu -19 291 1 2157 111 3 0 chr17 43785616 43785914 -41652566 - AluSp SINE Alu -10 303 5 663 207 11 37 chr17 43785914 43786060 -41652420 - MER3 DNA MER1_type -40 169 22 224 294 0 0 chr17 43786061 43786112 -41652368 + L2 LINE L2 3192 3242 -30 235 127 55 36 chr17 43788525 43788580 -41649900 + G-rich Low_complexity Low_complexity 4 59 0 198 301 159 45 chr17 43790272 43790448 -41648032 - L2 LINE L2 -84 3188 2993 1153 81 0 7 chr17 43790570 43790718 -41647762 - AluSg SINE Alu -163 147 1 240 306 47 24 chr17 43790720 43790805 -41647675 + MLT1H1 LTR MaLR 235 321 -274 535 148 0 11 chr17 43790843 43790931 -41647549 + FLAM SINE Alu 38 124 -19 867 215 42 0 chr17 43790931 43791122 -41647358 + MLT1H1 LTR MaLR 344 542 -13 319 276 20 99 chr17 43791133 43791212 -41647268 - MIR SINE MIR -121 141 78 2021 151 0 19 chr17 43791212 43791530 -41646950 + AluJo SINE Alu 1 312 0 319 276 20 99 chr17 43791530 43791602 -41646878 - MIR SINE MIR -184 78 2 271 170 0 0 chr17 43791767 43791814 -41646666 - MER3 DNA MER1_type -5 204 158 363 209 0 0 chr17 43791817 43791884 -41646596 + AluJ/FLAM SINE Alu 1 67 -235 1020 127 117 46 chr17 43792182 43792379 -41646101 + AluJo SINE Alu 80 290 -22 660 208 74 20 chr17 43793610 43793812 -41644668 + MER20 DNA MER1_type 6 218 -1 1488 172 0 115 chr17 43794385 43794723 -41643757 + AluJo SINE Alu 3 301 -1 2306 74 10 0 chr17 43795458 43795755 -41642725 + AluY SINE Alu 1 300 -11 463 226 5 168 chr17 43795784 43795938 -41642542 - L1 LINE L1 -760 5386 5280 1597 148 59 7 chr17 43795938 43796208 -41642272 - AluJo SINE Alu -22 290 7 463 226 5 168 chr17 43796208 43796302 -41642178 - L1 LINE L1 -866 5280 5172 728 239 0 0 chr17 43796325 43796467 -41642013 - FLAM_A SINE Alu 0 142 1 1218 85 44 114 chr17 43796468 43796623 -41641857 + Tigger7 DNA MER2_type 2240 2370 -121 1958 90 76 17 chr17 43796623 43796911 -41641569 + AluSx SINE Alu 1 305 -7 1218 85 44 114 chr17 43796911 43797026 -41641454 + Tigger7 DNA MER2_type 2370 2491 0 187 119 0 119 chr17 43797130 43797148 -41641332 - L2 LINE L2 -7 3306 3294 2119 97 17 0 chr17 43797148 43797438 -41641042 + AluSq SINE Alu 1 295 -18 187 119 0 119 chr17 43797438 43797461 -41641019 - L2 LINE L2 -19 3294 3270 219 300 25 0 chr17 43797654 43797734 -41640746 - L2 LINE L2 -856 2458 2377 808 136 25 6 chr17 43797954 43798206 -41640274 + AluJ SINE Alu 1 296 -16 2168 129 0 0 chr17 43798803 43799106 -41639374 + AluSx SINE Alu 1 303 -9 938 261 8 39 chr17 43799146 43799403 -41639077 - MIR SINE MIR 0 262 14 2141 112 0 3 chr17 43799458 43799752 -41638728 - AluSg SINE Alu -15 295 3 1662 113 3 103 chr17 43799755 43800090 -41638390 - AluY SINE Alu 0 304 1 2131 122 0 7 chr17 43800095 43800399 -41638081 - AluJb SINE Alu -10 302 1 2399 63 3 3 chr17 43801762 43802065 -41636415 - AluSc SINE Alu -4 305 3 645 196 109 7 chr17 43802067 43802205 -41636275 - FRAM SINE Alu -14 162 11 321 169 0 0 chr17 43802218 43802277 -41636203 + (TCCTG)n Simple_repeat Simple_repeat 2 60 0 1067 213 19 5 chr17 43803389 43803600 -41634880 + MER20 DNA MER1_type 3 216 -3 200 256 0 0 chr17 43803613 43803652 -41634828 + polypyrimidine Low_complexity Low_complexity 2 40 0 903 106 16 0 chr17 43803685 43803808 -41634672 + AluSg/x SINE Alu 156 280 -32 1149 171 117 7 chr17 43803830 43804104 -41634376 - L1MB8 LINE L1 -52 6126 5823 2043 147 3 6 chr17 43804104 43804417 -41634063 - AluSx SINE Alu 0 312 1 1239 181 108 25 chr17 43804419 43804696 -41633784 - AluJo SINE Alu -7 305 6 1872 156 3 7 chr17 43804718 43805019 -41633461 - AluJb SINE Alu -12 300 1 1117 153 18 31 chr17 43805021 43805249 -41633231 - L1MB8 LINE L1 -495 5689 5465 556 217 147 40 chr17 43805249 43805390 -41633090 - MLT2D LTR ERVL -101 313 144 7255 56 28 0 chr17 43805390 43806263 -41632217 - MER11D LTR ERVK 0 897 1 556 217 147 40 chr17 43806263 43806319 -41632161 - MLT2D LTR ERVL -270 144 95 487 278 127 19 chr17 43806360 43806565 -41631915 - L1MB8 LINE L1 -812 5334 5108 2468 62 0 0 chr17 43806578 43806882 -41631598 + AluY SINE Alu 1 304 -7 1883 126 18 0 chr17 43806905 43807183 -41631297 + AluSx SINE Alu 21 303 -9 864 119 0 37 chr17 43807199 43807333 -41631147 + AluJ SINE Alu 4 132 -170 23 0 0 0 chr17 43807333 43807356 -41631124 + AT_rich Low_complexity Low_complexity 1 23 0 2127 111 13 0 chr17 43807362 43807660 -41630820 + AluSx SINE Alu 2 303 -9 215 283 56 40 chr17 43808080 43808233 -41630247 - MIR3 SINE MIR -10 198 47 271 219 178 0 chr17 43808233 43808306 -41630174 + MER45 DNA AcHobo 1 86 -954 830 224 6 0 chr17 43808308 43808469 -41630011 + AluJ SINE Alu 137 298 -14 2503 195 33 45 chr17 43808539 43809493 -41628987 + LTR13 LTR ERVK 1 995 -12 2014 90 4 8 chr17 43809504 43809770 -41628710 - AluSx SINE Alu -47 265 1 1068 154 12 0 chr17 43809770 43809939 -41628541 - FRAM SINE Alu -9 167 1 1549 130 0 67 chr17 43809954 43810239 -41628241 - AluJb SINE Alu -23 289 24 298 189 198 9 chr17 43810251 43810362 -41628118 + MIR SINE MIR 117 248 -14 188 184 0 0 chr17 43810501 43810539 -41627941 + MIR SINE MIR 106 143 -65 2130 121 0 13 chr17 43810544 43810858 -41627622 + AluSx SINE Alu 3 312 0 353 294 49 56 chr17 43811190 43811333 -41627147 - MIR SINE MIR -31 231 90 437 323 110 8 chr17 43812195 43812423 -41626057 - MIR SINE MIR -14 248 1 1852 125 0 4 chr17 43812541 43812805 -41625675 + AluSx SINE Alu 1 263 -49 189 107 0 0 chr17 43813890 43813918 -41624562 + (CA)n Simple_repeat Simple_repeat 2 29 0 2250 39 46 3 chr17 43816042 43816324 -41622156 + AluY SINE Alu 1 294 -17 1314 202 20 47 chr17 43816329 43816626 -41621854 + AluJo SINE Alu 1 289 -23 490 231 80 33 chr17 43816798 43817010 -41621470 + AluSg SINE Alu 6 227 -83 545 273 63 40 chr17 43817260 43817513 -41620967 + L2 LINE L2 2969 3227 -86 1088 124 0 72 chr17 43817515 43817709 -41620771 + AluSx SINE Alu 1 180 -132 180 158 0 0 chr17 43818000 43818038 -41620442 + A-rich Low_complexity Low_complexity 1 38 0 182 61 0 30 chr17 43818224 43818257 -41620223 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 216 0 0 0 chr17 43818862 43818886 -41619594 + (A)n Simple_repeat Simple_repeat 1 24 0 1818 118 26 20 chr17 43818893 43819197 -41619283 + AluSx SINE Alu 1 306 -6 379 239 11 0 chr17 43820094 43820182 -41618298 - L2 LINE L2 0 3313 3225 315 0 0 0 chr17 43820783 43820818 -41617662 + (CA)n Simple_repeat Simple_repeat 2 36 0 477 286 23 0 chr17 43822934 43823067 -41615413 + MIR SINE MIR 127 262 0 424 287 112 7 chr17 43823203 43823346 -41615134 + MIR SINE MIR 64 221 -41 458 326 9 27 chr17 43824191 43824412 -41614068 + MER102b DNA MER1_type 113 329 -12 352 348 106 12 chr17 43825452 43825613 -41612867 + MER5A DNA MER1_type 14 189 0 1339 190 0 36 chr17 43828193 43828472 -41610008 + AluJo SINE Alu 1 269 -43 582 227 8 0 chr17 43828509 43828628 -41609852 - MIR SINE MIR -31 231 112 2295 102 0 0 chr17 43828628 43828941 -41609539 + AluSq SINE Alu 1 313 0 201 369 9 18 chr17 43829115 43829226 -41609254 + L2 LINE L2 2230 2339 -975 306 180 0 0 chr17 43830070 43830131 -41608349 + (CA)n Simple_repeat Simple_repeat 2 62 0 23 0 0 0 chr17 43831487 43831510 -41606970 + AT_rich Low_complexity Low_complexity 1 23 0 217 0 0 57 chr17 43831661 43831696 -41606784 + (CGGG)n Simple_repeat Simple_repeat 3 35 0 332 286 29 0 chr17 43832493 43832522 -41605958 + C-rich Low_complexity Low_complexity 6 33 -116 192 77 0 0 chr17 43832522 43832548 -41605932 + (CAG)n Simple_repeat Simple_repeat 3 28 0 332 286 29 0 chr17 43832548 43832658 -41605822 + C-rich Low_complexity Low_complexity 33 149 0 206 140 0 40 chr17 43832776 43832826 -41605654 + (CCCCCT)n Simple_repeat Simple_repeat 3 50 0 24 0 0 0 chr17 43832873 43832897 -41605583 + GC_rich Low_complexity Low_complexity 1 24 0 284 119 17 0 chr17 43832963 43833022 -41605458 + (CCG)n Simple_repeat Simple_repeat 2 61 0 27 81 0 0 chr17 43833402 43833464 -41605016 + GC_rich Low_complexity Low_complexity 1 62 0 224 213 0 16 chr17 43833494 43833555 -41604925 + G-rich Low_complexity Low_complexity 1 60 0 341 309 100 17 chr17 43837297 43837466 -41601014 - MIR SINE MIR -67 141 17 378 297 97 34 chr17 43838112 43838287 -41600193 + MIR3 SINE MIR 6 191 -17 191 299 67 52 chr17 43838322 43838456 -41600024 + MIR3 SINE MIR 58 193 -15 245 333 0 45 chr17 43838519 43838696 -41599784 + GA-rich Low_complexity Low_complexity 3 171 0 264 314 51 22 chr17 43839000 43839137 -41599343 + MIR3 SINE MIR 58 198 -10 267 310 76 41 chr17 43842569 43842740 -41595740 + MIR SINE MIR 84 260 -2 469 237 33 53 chr17 43843347 43843405 -41595075 - MIR SINE MIR -60 202 144 1891 126 61 0 chr17 43843405 43843698 -41594782 - AluSx SINE Alu -1 311 1 469 237 33 53 chr17 43843698 43843791 -41594689 - MIR SINE MIR -118 144 54 1976 131 3 10 chr17 43844202 43844508 -41593972 + AluJb SINE Alu 7 310 -2 184 323 11 43 chr17 43844558 43844651 -41593829 + MIR SINE MIR 167 256 -6 189 196 0 0 chr17 43845009 43845065 -41593415 + GA-rich Low_complexity Low_complexity 2 57 0 180 158 0 0 chr17 43845242 43845280 -41593200 + (CGA)n Simple_repeat Simple_repeat 2 39 0 183 42 0 0 chr17 43846163 43846187 -41592293 + (TG)n Simple_repeat Simple_repeat 2 25 0 848 267 205 38 chr17 43848524 43849257 -41589223 + L2 LINE L2 2432 3313 0 337 277 254 26 chr17 43849262 43849640 -41588840 + L2 LINE L2 2791 3265 -7 1696 128 55 18 chr17 43850177 43850474 -41588006 + AluSx SINE Alu 2 308 0 1447 67 164 127 chr17 43850765 43851064 -41587416 - AluSg SINE Alu 0 310 1 436 261 109 0 chr17 43851258 43851396 -41587084 - MIR SINE MIR 0 262 110 181 194 15 30 chr17 43852576 43852643 -41585837 + GA-rich Low_complexity Low_complexity 3 68 0 257 252 16 49 chr17 43852796 43852919 -41585561 + (CGGGG)n Simple_repeat Simple_repeat 5 123 0 35 54 0 0 chr17 43852935 43852991 -41585489 + GC_rich Low_complexity Low_complexity 1 56 0 31 0 0 0 chr17 43853075 43853106 -41585374 + GC_rich Low_complexity Low_complexity 1 31 0 279 221 15 0 chr17 43853113 43853181 -41585299 + G-rich Low_complexity Low_complexity 3 71 0 24 53 0 0 chr17 43853313 43853351 -41585129 + GC_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr17 43853489 43853515 -41584965 + GC_rich Low_complexity Low_complexity 1 26 0 2336 88 0 0 chr17 43855795 43856103 -41582377 - AluSg SINE Alu -2 308 1 2410 67 0 19 chr17 43862222 43862536 -41575944 - AluSc SINE Alu -1 308 1 2144 80 42 0 chr17 43862571 43862858 -41575622 - AluSg SINE Alu -11 299 1 684 298 35 35 chr17 43864708 43864963 -41573517 + MIR SINE MIR 8 262 0 269 317 13 80 chr17 43864913 43865137 -41573343 - MIR SINE MIR -33 229 21 * 2277 50 7 13 chr17 43866265 43866563 -41571917 - AluSp SINE Alu -17 296 1 806 170 44 6 chr17 43866593 43866752 -41571728 + FRAM SINE Alu 1 163 -13 813 235 43 21 chr17 43866776 43866898 -41571582 - L1ME3A LINE L1 -5 6165 6047 2230 100 0 0 chr17 43866898 43867197 -41571283 + AluSg SINE Alu 6 304 -6 813 235 43 21 chr17 43867197 43867355 -41571125 - L1ME3A LINE L1 -123 6047 5879 477 56 0 185 chr17 43867366 43867390 -41571090 - L1MB4 LINE L1 -2 6178 6151 705 198 0 8 chr17 43867390 43867516 -41570964 + FLAM_A SINE Alu 1 125 -8 477 56 0 185 chr17 43867516 43867599 -41570881 - L1MB4 LINE L1 -29 6151 6091 1424 147 34 4 chr17 43867600 43867838 -41570642 + AluJb SINE Alu 1 245 -67 756 193 15 0 chr17 43867838 43867973 -41570507 + AluJo/FRAM SINE Alu 175 311 -1 1673 186 7 0 chr17 43867981 43868277 -41570203 + AluJo SINE Alu 1 298 -14 2086 104 17 0 chr17 43868534 43868831 -41569649 - AluSx SINE Alu -10 302 1 1009 104 0 0 chr17 43868831 43868965 -41569515 - AluSq/x SINE Alu -177 136 3 1608 139 6 101 chr17 43869474 43869819 -41568661 - AluJo SINE Alu 0 312 1 785 180 72 0 chr17 43869855 43869994 -41568486 + AluJb SINE Alu 143 291 -21 599 152 19 9 chr17 43869994 43870099 -41568381 - FLAM_A SINE Alu -19 123 18 375 375 7 14 chr17 43870559 43870703 -41567777 - L2 LINE L2 -216 3056 2914 1165 168 0 0 chr17 43870824 43871015 -41567465 - AluSp SINE Alu -2 311 121 4012 76 9 76 chr17 43871024 43871760 -41566720 - SVA Other Other -267 1119 433 1225 73 0 57 chr17 43871778 43872024 -41566456 - SVA Other Other -520 866 635 2643 86 38 90 chr17 43872055 43872555 -41565925 - SVA Other Other -520 866 393 21 36 0 0 chr17 43872606 43872634 -41565846 + GC_rich Low_complexity Low_complexity 1 28 0 2346 86 0 7 chr17 43872931 43873233 -41565247 - AluSg SINE Alu -10 300 1 1019 105 0 0 chr17 43873237 43873370 -41565110 - AluSq/x SINE Alu -180 133 1 1993 130 14 0 chr17 43873834 43874127 -41564353 + AluSx SINE Alu 3 299 -13 222 236 73 91 chr17 43874557 43874667 -41563813 + L2 LINE L2 3152 3259 -13 303 245 90 65 chr17 43875987 43876142 -41562338 - MIR3 SINE MIR 0 208 50 1952 135 10 16 chr17 43876217 43876528 -41561952 - AluJb SINE Alu -3 309 1 191 88 29 0 chr17 43876753 43876787 -41561693 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 2383 68 0 10 chr17 43877171 43877479 -41561001 - AluY SINE Alu -2 309 5 2149 111 0 3 chr17 43877481 43877779 -41560701 - AluSc SINE Alu -12 297 1 1658 139 0 66 chr17 43878116 43878256 -41560224 + AluJo SINE Alu 13 124 -188 2444 42 0 19 chr17 43878256 43878563 -41559917 + AluY SINE Alu 1 301 -10 1658 139 0 66 chr17 43878563 43878723 -41559757 + AluJo SINE Alu 124 293 -19 1451 178 62 11 chr17 43878779 43879055 -41559425 - AluJo SINE Alu -22 290 1 727 196 0 15 chr17 43879057 43879190 -41559290 - AluJo/FLAM SINE Alu -181 131 1 2075 94 3 20 chr17 43879196 43879494 -41558986 - AluSg SINE Alu -17 293 1 932 118 106 6 chr17 43879494 43879655 -41558825 - AluSg/x SINE Alu -7 305 129 2042 121 31 0 chr17 43879684 43879973 -41558507 + AluSx SINE Alu 1 298 -14 364 191 0 48 chr17 43880054 43880138 -41558342 + MIR SINE MIR 66 145 -117 773 119 0 0 chr17 43880907 43881016 -41557464 + AluJo/FLAM SINE Alu 1 109 -203 2172 106 3 0 chr17 43881016 43881317 -41557163 - AluSg SINE Alu -8 302 1 239 236 0 18 chr17 43881442 43881497 -41556983 + CT-rich Low_complexity Low_complexity 2 55 0 371 274 48 24 chr17 43882497 43882621 -41555859 - MIR SINE MIR -77 185 59 827 149 0 57 chr17 43882644 43882757 -41555723 + AluJo/FLAM SINE Alu 1 106 -196 2270 89 0 22 chr17 43882757 43883070 -41555410 - AluSg SINE Alu -4 306 1 827 149 0 57 chr17 43883070 43883097 -41555383 + AluJo/FLAM SINE Alu 106 133 -169 1630 130 45 41 chr17 43883206 43883367 -41555113 - AluSx SINE Alu -18 294 130 2471 54 0 19 chr17 43883367 43883680 -41554800 - AluY SINE Alu -4 307 1 1630 130 45 41 chr17 43883680 43883810 -41554670 - AluSx SINE Alu -182 130 2 480 198 0 0 chr17 43884457 43884543 -41553937 - AluJ/FLAM SINE Alu -226 86 1 827 180 0 0 chr17 43885649 43885777 -41552703 - FLAM_A SINE Alu -5 128 1 1624 174 10 26 chr17 43886045 43886356 -41552124 + AluJo SINE Alu 5 310 -2 821 191 0 0 chr17 43886509 43886650 -41551830 - FLAM_C SINE Alu -2 141 1 2525 70 3 0 chr17 43886848 43887149 -41551331 - AluY SINE Alu -9 302 1 680 133 89 0 chr17 43887156 43887291 -41551189 + L1MC3 LINE L1 6943 7089 -696 2529 69 3 0 chr17 43887294 43887597 -41550883 + AluY SINE Alu 2 305 -6 327 273 0 0 chr17 43887605 43887682 -41550798 + MLT1F1 LTR MaLR 35 111 -456 765 240 221 0 chr17 43887689 43888113 -41550367 + L1MC3 LINE L1 7397 7723 -244 1715 119 32 54 chr17 43888113 43888225 -41550255 + AluJo SINE Alu 18 131 -181 2687 61 0 0 chr17 43888225 43888536 -41549944 + AluY SINE Alu 1 311 0 1715 119 32 54 chr17 43888536 43888701 -41549779 + AluJo SINE Alu 131 289 -23 1849 95 49 59 chr17 43888703 43888838 -41549642 + AluSx SINE Alu 2 137 -175 2359 104 0 0 chr17 43888838 43889136 -41549344 + AluSq SINE Alu 1 298 -15 1849 95 49 59 chr17 43889136 43889198 -41549282 + AluSx SINE Alu 137 198 -114 2462 60 0 24 chr17 43889198 43889496 -41548984 - AluSg SINE Alu -19 291 1 1849 95 49 59 chr17 43889496 43889602 -41548878 + AluSx SINE Alu 198 303 -9 765 240 221 0 chr17 43889602 43889688 -41548792 + L1MC3 LINE L1 7723 7788 -179 2277 76 0 33 chr17 43889688 43889989 -41548491 + AluY SINE Alu 1 291 -20 765 240 221 0 chr17 43889989 43890017 -41548463 + L1MC3 LINE L1 7788 7967 0 201 333 81 8 chr17 43891013 43891136 -41547344 - MIR3 SINE MIR -4 204 73 2540 67 0 3 chr17 43891383 43891680 -41546800 - AluY SINE Alu -15 296 1 4494 175 51 40 chr17 43891893 43892019 -41546461 + LTR13 LTR ERVK 1 124 -883 2494 57 3 7 chr17 43892019 43892315 -41546165 - AluY SINE Alu -16 295 1 4494 175 51 40 chr17 43892315 43893184 -41545296 + LTR13 LTR ERVK 124 1007 0 1099 159 95 20 chr17 43893195 43893447 -41545033 - LTR13 LTR ERVK -736 271 1 1783 161 9 38 chr17 43893511 43893654 -41544826 + AluJb SINE Alu 1 147 -165 2594 47 0 7 chr17 43893654 43893952 -41544528 + AluY SINE Alu 1 296 -15 1783 161 9 38 chr17 43893952 43894124 -41544356 + AluJb SINE Alu 147 307 -5 2387 102 0 3 chr17 43894886 43895199 -41543281 + AluSx SINE Alu 1 312 0 1043 113 0 0 chr17 43895503 43895636 -41542844 + AluSq/x SINE Alu 1 133 -180 2233 117 3 3 chr17 43895639 43895939 -41542541 + AluSg SINE Alu 1 300 -10 1981 128 60 13 chr17 43896077 43896375 -41542105 + AluSx SINE Alu 1 312 0 222 230 135 0 chr17 43896489 43896563 -41541917 - MIR3 SINE MIR -40 168 85 2307 80 24 0 chr17 43898250 43898539 -41539941 - AluSg SINE Alu -14 296 1 2235 99 10 0 chr17 43898541 43898833 -41539647 - AluSx SINE Alu -17 295 1 2157 107 35 0 chr17 43898840 43899129 -41539351 - AluSp SINE Alu -14 299 1 1797 146 3 43 chr17 43899134 43899435 -41539045 - AluJo SINE Alu -22 290 2 198 103 0 0 chr17 43900144 43900173 -41538307 + (T)n Simple_repeat Simple_repeat 1 29 0 1149 74 0 0 chr17 43900321 43900456 -41538024 + AluSq/x SINE Alu 1 135 -178 2207 92 0 4 chr17 43900456 43900800 -41537680 + AluSc SINE Alu 1 343 0 2410 102 0 3 chr17 43901910 43902223 -41536257 + AluSx SINE Alu 1 312 0 327 271 62 35 chr17 43902742 43902886 -41535594 + L2 LINE L2 3147 3294 -19 574 220 25 0 chr17 43902908 43903026 -41535454 + FLAM_A SINE Alu 12 132 -10 2372 119 0 0 chr17 43903052 43903364 -41535116 + AluSx SINE Alu 1 312 0 2303 116 6 3 chr17 43904865 43905176 -41533304 + AluSx SINE Alu 1 312 0 186 43 0 0 chr17 43905529 43905552 -41532928 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 194 0 0 37 chr17 43905551 43905578 -41532902 + (CA)n Simple_repeat Simple_repeat 1 26 0 2077 138 3 3 chr17 43906251 43906548 -41531932 + AluJb SINE Alu 1 297 -15 1199 81 92 0 chr17 43906551 43906736 -41531744 + L1PA11 LINE L1 5973 6174 0 327 259 25 0 chr17 43906739 43906820 -41531660 - MER5B DNA MER1_type -48 130 48 332 237 149 18 chr17 43906902 43907016 -41531464 - MIR SINE MIR -61 147 19 2121 77 95 0 chr17 43907585 43907859 -41530621 + AluSx SINE Alu 1 300 -12 673 191 8 0 chr17 43907887 43908018 -41530462 + FLAM_A SINE Alu 1 132 -1 2199 130 0 16 chr17 43908026 43908160 -41530320 + AluSx SINE Alu 2 137 -175 2242 98 3 10 chr17 43908160 43908456 -41530024 + AluSg SINE Alu 1 294 -16 2199 130 0 16 chr17 43908456 43908636 -41529844 + AluSx SINE Alu 137 311 -1 1867 158 7 20 chr17 43908762 43908933 -41529547 - AluJo SINE Alu -8 304 137 2251 112 3 10 chr17 43908933 43909237 -41529243 - AluSg SINE Alu -6 304 3 1867 158 7 20 chr17 43909237 43909362 -41529118 - AluJo SINE Alu -175 137 12 2115 125 3 7 chr17 43909363 43909667 -41528813 + AluSx SINE Alu 1 303 -9 638 99 10 0 chr17 43910040 43910141 -41528339 + AluSg/x SINE Alu 205 306 -4 250 286 33 0 chr17 43910240 43910331 -41528149 - MIR SINE MIR -79 129 36 1309 90 0 17 chr17 43910885 43911063 -41527417 - AluSg/x SINE Alu -1 311 137 1583 166 3 49 chr17 43911158 43911321 -41527159 - AluSg SINE Alu -6 294 150 2336 74 3 45 chr17 43911321 43911483 -41526997 - AluSq SINE Alu -17 296 152 2426 89 7 0 chr17 43911483 43911787 -41526693 - AluSx SINE Alu -6 306 1 2336 74 3 45 chr17 43911787 43911933 -41526547 - AluSq SINE Alu -161 152 1 1583 166 3 49 chr17 43911933 43912077 -41526403 - AluSg SINE Alu -150 150 1 309 125 0 94 chr17 43912080 43912144 -41526336 - AluJo SINE Alu -159 143 86 2486 61 0 3 chr17 43912221 43912515 -41525965 + AluY SINE Alu 8 300 -11 1253 124 6 0 chr17 43912515 43912692 -41525788 + AluSq SINE Alu 134 311 -2 2559 57 0 0 chr17 43912702 43913001 -41525479 + AluY SINE Alu 1 299 -12 369 263 20 10 chr17 43913004 43913103 -41525377 + MIR SINE MIR 157 256 -6 2200 129 3 3 chr17 43913212 43913521 -41524959 - AluSx SINE Alu -3 309 1 981 189 0 0 chr17 43913818 43913993 -41524487 + MER3 DNA MER1_type 1 128 -81 210 250 0 0 chr17 43914107 43914151 -41524329 + (TG)n Simple_repeat Simple_repeat 1 44 0 415 262 0 41 chr17 43915014 43915136 -41523344 + L1ME4a LINE L1 5590 5706 -415 1895 93 116 4 chr17 43915138 43915406 -41523074 + AluSg1 SINE Alu 1 298 -11 617 37 0 12 chr17 43915431 43915512 -41522968 + (TTCC)n Simple_repeat Simple_repeat 3 82 0 2007 98 0 57 chr17 43915514 43915810 -41522670 - AluSp SINE Alu -34 279 1 402 247 44 50 chr17 43915810 43915838 -41522642 + L1ME4a LINE L1 5703 5730 -391 2653 56 0 0 chr17 43915838 43916143 -41522337 + AluY SINE Alu 1 305 -6 402 247 44 50 chr17 43916143 43916193 -41522287 + L1ME4a LINE L1 5730 5779 -342 2622 62 0 0 chr17 43916193 43916500 -41521980 + AluY SINE Alu 1 307 -4 402 247 44 50 chr17 43916500 43916602 -41521878 + L1ME4a LINE L1 5779 5883 -238 578 187 0 0 chr17 43916611 43916718 -41521762 + U6 snRNA snRNA 1 107 0 2277 111 0 22 chr17 43916742 43917057 -41521423 + AluSx SINE Alu 1 308 -4 2198 134 0 0 chr17 43917084 43917389 -41521091 + AluSx SINE Alu 4 308 -4 969 184 19 0 chr17 43917391 43917549 -41520931 + AluJb SINE Alu 135 295 -17 318 219 211 24 chr17 43917811 43917934 -41520546 + MIR SINE MIR 105 250 -12 284 296 34 0 chr17 43918088 43918176 -41520304 - MIR3 SINE MIR -26 182 92 181 270 135 22 chr17 43918179 43918268 -41520212 + L2 LINE L2 3081 3179 -93 351 0 0 0 chr17 43919028 43919067 -41519413 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 485 211 53 0 chr17 43919075 43919189 -41519291 - MIR3 SINE MIR -1 207 88 219 168 161 124 chr17 43919376 43919434 -41519046 - MIR3 SINE MIR -25 183 129 2474 102 0 3 chr17 43919434 43919747 -41518733 + AluSq SINE Alu 1 312 -1 219 168 161 124 chr17 43919747 43919825 -41518655 - MIR3 SINE MIR -79 129 42 365 299 86 23 chr17 43920072 43920246 -41518234 - MIR3 SINE MIR -8 200 16 1935 154 0 47 chr17 43920300 43920472 -41518008 - AluSx SINE Alu -7 305 153 2020 125 0 17 chr17 43920472 43920793 -41517687 - AluSg SINE Alu 0 310 1 1935 154 0 47 chr17 43920793 43920939 -41517541 - AluSx SINE Alu -159 153 2 2155 118 7 0 chr17 43920974 43921291 -41517189 - AluSq SINE Alu 0 319 1 979 111 7 7 chr17 43921291 43921426 -41517054 - AluSq/x SINE Alu -178 135 1 2511 60 3 3 chr17 43922104 43922405 -41516075 - AluY SINE Alu -10 301 1 330 176 0 160 chr17 43922412 43922464 -41516016 + MIR SINE MIR 47 73 -189 1625 106 4 30 chr17 43922464 43922733 -41515747 - AluSx SINE Alu 0 320 58 330 176 0 160 chr17 43922733 43922797 -41515683 + MIR SINE MIR 73 146 -116 358 288 59 25 chr17 43922919 43923037 -41515443 - L2 LINE L2 -14 3258 3137 231 67 0 0 chr17 43923134 43923164 -41515316 + Alu SINE Alu 1 30 -273 535 189 15 117 chr17 43924446 43924642 -41513838 + MER69A DNA AcHobo 2 177 0 685 175 0 40 chr17 43924700 43924826 -41513654 + FLAM_C SINE Alu 2 122 -21 183 80 0 0 chr17 43924853 43924878 -41513602 + (A)n Simple_repeat Simple_repeat 1 25 0 274 289 40 88 chr17 43924913 43925097 -41513383 + MIR SINE MIR 20 206 -56 2537 73 3 0 chr17 43925848 43926149 -41512331 - AluSp SINE Alu -11 302 1 1234 96 19 0 chr17 43926219 43926376 -41512104 - AluSp SINE Alu -20 293 134 2152 129 7 0 chr17 43926376 43926685 -41511795 - AluSx SINE Alu 0 312 2 439 210 45 150 chr17 43926685 43926802 -41511678 - L1ME3 LINE L1 -51 6119 5991 2434 80 0 29 chr17 43926802 43927115 -41511365 - AluY SINE Alu -6 305 2 439 210 45 150 chr17 43927115 43927254 -41511226 - L1ME3 LINE L1 -179 5991 5758 296 212 15 0 chr17 43927255 43927321 -41511159 - FLAM SINE Alu 0 133 67 2507 74 10 0 chr17 43927325 43927635 -41510845 - AluSp SINE Alu 0 313 1 1975 123 0 69 chr17 43927635 43927952 -41510528 - AluSx SINE Alu -17 295 1 601 175 63 0 chr17 43927953 43928079 -41510401 - MER3 DNA MER1_type -43 166 33 2381 96 3 0 chr17 43928085 43928387 -41510093 + AluSx SINE Alu 6 308 -4 320 260 26 0 chr17 43928453 43928530 -41509950 - L1MCa LINE L1 -6032 394 316 2297 118 3 0 chr17 43929583 43929880 -41508600 - AluSx SINE Alu -13 299 2 2204 68 11 0 chr17 43930451 43930714 -41507766 - AluY SINE Alu -19 292 27 1641 170 19 16 chr17 43932095 43932240 -41506240 - L1MCa LINE L1 -6087 339 196 1869 157 28 0 chr17 43932240 43932527 -41505953 + AluJo SINE Alu 1 295 -17 1641 170 19 16 chr17 43932527 43932692 -41505788 - L1MCa LINE L1 -6230 196 28 646 151 101 0 chr17 43932708 43932827 -41505653 - FLAM_C SINE Alu 0 133 3 2095 149 0 7 chr17 43932900 43933209 -41505271 + AluJo SINE Alu 1 307 -5 23 33 0 0 chr17 43933260 43933290 -41505190 + AT_rich Low_complexity Low_complexity 1 30 0 2154 110 34 0 chr17 43933290 43933581 -41504899 - AluSq SINE Alu -12 301 1 1117 221 24 26 chr17 43933584 43933834 -41504646 - L1M4 LINE L1 -2739 3407 3157 2012 146 14 0 chr17 43933834 43934129 -41504351 - AluSx SINE Alu -13 299 1 1117 221 24 26 chr17 43934129 43934259 -41504221 - L1M4 LINE L1 -2989 3157 3028 303 93 0 0 chr17 43934260 43934303 -41504177 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 475 179 0 0 chr17 43934311 43934395 -41504085 - AluS SINE Alu -228 85 2 2165 209 19 34 chr17 43934396 43934588 -41503892 - L1M4 LINE L1 -3108 3038 2845 2347 99 0 10 chr17 43934588 43934891 -41503589 + AluSx SINE Alu 1 300 -12 2165 209 19 34 chr17 43934891 43935282 -41503198 - L1M4 LINE L1 -3301 2845 2464 1755 178 0 20 chr17 43935298 43935602 -41502878 + AluJo SINE Alu 1 298 -14 444 232 100 63 chr17 43935624 43935650 -41502830 + L1ME4a LINE L1 5921 5945 -176 2154 133 0 7 chr17 43935650 43935959 -41502521 + AluJb SINE Alu 1 307 -5 444 232 100 63 chr17 43935959 43936036 -41502444 + L1ME4a LINE L1 5945 6018 -103 1938 164 3 6 chr17 43936036 43936347 -41502133 - AluJo SINE Alu -2 310 1 444 232 100 63 chr17 43936347 43936432 -41502048 + L1ME4a LINE L1 6018 6117 -4 275 244 11 22 chr17 43936803 43936893 -41501587 + L2 LINE L2 2969 3057 -215 1886 142 13 13 chr17 43936933 43937235 -41501245 - AluJb SINE Alu -10 302 1 2262 86 0 17 chr17 43937678 43937973 -41500507 - AluSq SINE Alu -21 292 7 995 224 33 20 chr17 43938058 43938303 -41500177 + MIR SINE MIR 6 253 -9 2112 111 9 25 chr17 43938638 43938953 -41499527 + AluSq SINE Alu 1 310 -3 5933 70 30 6 chr17 43938981 43939823 -41498657 + SVA Other Other 5 866 -520 6205 65 24 63 chr17 43939848 43941188 -41497292 + SVA Other Other 433 1404 0 2147 78 0 0 chr17 43941201 43941472 -41497008 + AluSg SINE Alu 1 271 -39 499 172 178 78 chr17 43941472 43941652 -41496828 + MSTC LTR MaLR 89 286 -142 1751 157 7 27 chr17 43941957 43942257 -41496223 + AluJb SINE Alu 11 304 -8 2092 112 13 13 chr17 43942377 43942680 -41495800 + AluSx SINE Alu 1 303 -9 539 308 53 35 chr17 43942866 43943184 -41495296 + MLT1I LTR MaLR 78 401 -8 2315 75 7 0 chr17 43943305 43943597 -41494883 - AluSq SINE Alu -17 296 3 2159 82 6 55 chr17 43943610 43943803 -41494677 - AluSp SINE Alu -1 312 111 222 37 0 0 chr17 43943803 43943830 -41494650 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2215 54 0 50 chr17 43943830 43944127 -41494353 - AluY SINE Alu -29 282 1 2159 82 6 55 chr17 43944127 43944260 -41494220 - AluSp SINE Alu -200 113 1 826 110 0 55 chr17 43944261 43944407 -41494073 + MSTC LTR MaLR 70 207 -221 1986 134 23 3 chr17 43944407 43944713 -41493767 + AluJb SINE Alu 1 312 0 487 272 89 73 chr17 43944718 43944966 -41493514 + L1MC5 LINE L1 7488 7744 -217 2415 69 10 0 chr17 43944966 43945272 -41493208 + AluY SINE Alu 1 309 -2 487 272 89 73 chr17 43945272 43945350 -41493130 + L1MC5 LINE L1 7744 7819 -142 764 159 56 87 chr17 43945403 43945423 -41493057 - AluJo SINE Alu -1 311 292 1845 117 37 17 chr17 43945423 43945585 -41492895 - AluSx SINE Alu -7 305 133 2358 67 3 3 chr17 43945585 43945882 -41492598 - AluSc SINE Alu -12 297 1 1845 117 37 17 chr17 43945882 43946018 -41492462 - AluSx SINE Alu -179 133 1 764 159 56 87 chr17 43946018 43946192 -41492288 - AluJo SINE Alu -20 292 123 22 35 0 0 chr17 43946231 43946260 -41492220 + AT_rich Low_complexity Low_complexity 1 29 0 2121 117 0 16 chr17 43946387 43946704 -41491776 + AluSx SINE Alu 1 312 0 2389 87 3 0 chr17 43946705 43947015 -41491465 + AluY SINE Alu 1 311 0 333 344 66 0 chr17 43947282 43947433 -41491047 - MIR SINE MIR -40 222 62 630 178 0 0 chr17 43947433 43947540 -41490940 + FLAM_C SINE Alu 34 140 -3 376 328 27 59 chr17 43947615 43947801 -41490679 - L1MC4a LINE L1 -1980 5828 5649 2227 94 3 0 chr17 43947922 43948229 -41490251 + AluSq SINE Alu 1 308 -5 411 38 0 0 chr17 43948250 43948303 -41490177 + (TG)n Simple_repeat Simple_repeat 2 54 0 344 304 184 0 chr17 43948661 43948786 -41489694 - MER5A DNA MER1_type -31 158 11 259 225 14 28 chr17 43949029 43949100 -41489380 - MIR SINE MIR -78 130 61 502 206 0 7 chr17 43950169 43950284 -41488196 - MIR SINE MIR -48 214 102 2314 103 0 6 chr17 43950436 43950748 -41487732 - AluSx SINE Alu -2 310 1 181 326 23 35 chr17 43951062 43951148 -41487332 + MIR SINE MIR 12 96 -166 471 228 53 0 chr17 43951205 43951319 -41487161 + LTR16A LTR ERVL 82 201 -249 2364 80 3 3 chr17 43951416 43951727 -41486753 - AluSp SINE Alu 0 313 3 2444 76 0 0 chr17 43951729 43952032 -41486448 - AluSq SINE Alu -10 303 1 517 241 74 12 chr17 43952038 43952200 -41486280 + LTR16A LTR ERVL 235 406 -44 1069 210 130 8 chr17 43952212 43952474 -41486006 + AluJb SINE Alu 1 294 -8 363 350 8 0 chr17 43952895 43953015 -41485465 + MIR3 SINE MIR 52 172 -36 199 352 35 28 chr17 43954507 43954649 -41483831 + MIR3 SINE MIR 66 208 0 706 317 177 30 chr17 43955852 43956596 -41481884 - L2 LINE L2 -558 2756 1903 1101 151 0 17 chr17 43956596 43956775 -41481705 + AluSg/x SINE Alu 137 312 0 1703 167 31 3 chr17 43957345 43957632 -41480848 + AluJo SINE Alu 1 295 -17 2167 103 0 0 chr17 43957647 43957938 -41480542 + AluSx SINE Alu 5 295 -17 190 333 73 24 chr17 43958028 43958151 -41480329 + L2 LINE L2 3129 3257 -15 2196 103 0 10 chr17 43959719 43960020 -41478460 + AluSx SINE Alu 1 298 -14 2257 56 7 36 chr17 43960020 43960324 -41478156 + AluY SINE Alu 1 296 -15 508 312 40 59 chr17 43961034 43961287 -41477193 - L1ME4a LINE L1 0 6121 5874 354 294 20 68 chr17 43961633 43961779 -41476701 + MIR SINE MIR 18 156 -106 2314 99 0 0 chr17 43961779 43962083 -41476397 + AluSg SINE Alu 1 304 -6 2085 100 0 42 chr17 43962360 43962671 -41475809 + AluSx SINE Alu 1 298 -14 2225 98 0 0 chr17 43965077 43965372 -41473108 + AluSx SINE Alu 11 305 -7 2166 99 27 0 chr17 43965837 43966129 -41472351 + AluSg SINE Alu 1 300 -10 726 173 68 62 chr17 43966137 43966299 -41472181 + AluJo SINE Alu 42 204 -108 2033 115 27 0 chr17 43966352 43966647 -41471833 + AluSx SINE Alu 1 303 -9 2271 108 3 0 chr17 43967278 43967585 -41470895 + AluSp SINE Alu 1 308 -5 2044 124 16 0 chr17 43967708 43968015 -41470465 - AluSx SINE Alu 0 312 1 1568 141 3 116 chr17 43968400 43968566 -41469914 + AluJo SINE Alu 1 114 -188 2162 99 0 3 chr17 43968566 43968859 -41469621 + AluSq SINE Alu 3 294 -19 1568 141 3 116 chr17 43968859 43969019 -41469461 + AluJo SINE Alu 114 290 -12 28 0 0 0 chr17 43969021 43969049 -41469431 + AT_rich Low_complexity Low_complexity 1 28 0 5148 112 110 117 chr17 43969066 43970632 -41467848 - pTR5 LTR ERV1 0 2438 743 1188 252 87 48 chr17 43970632 43970817 -41467663 - L2 LINE L2 -32 3281 3105 2269 84 10 0 chr17 43970817 43971125 -41467355 + AluSq SINE Alu 1 311 -2 414 53 0 0 chr17 43971125 43971182 -41467298 + (TA)n Simple_repeat Simple_repeat 1 57 0 1188 252 87 48 chr17 43971182 43971495 -41466985 - L2 LINE L2 -207 3106 2745 1028 320 114 68 chr17 43971711 43972134 -41466346 + L3 LINE CR1 423 825 -752 2260 90 7 7 chr17 43972134 43972444 -41466036 + AluY SINE Alu 1 310 -1 1028 320 114 68 chr17 43972444 43972997 -41465483 + L3 LINE CR1 825 1444 -133 434 228 50 83 chr17 43973009 43973189 -41465291 - MIR SINE MIR 0 262 89 2044 113 11 7 chr17 43973206 43973490 -41464990 + AluSq SINE Alu 1 285 -28 2387 71 0 0 chr17 43974425 43974719 -41463761 + AluSx SINE Alu 15 308 -4 25 51 0 0 chr17 43975317 43975356 -41463124 + GC_rich Low_complexity Low_complexity 1 39 0 325 299 68 0 chr17 43977460 43977577 -41460903 + MIR SINE MIR 96 220 -42 512 206 94 47 chr17 43978643 43978766 -41459714 + MIR SINE MIR 16 151 -111 729 210 40 23 chr17 43978766 43978942 -41459538 - MER104 DNA MER2_type -1 179 1 512 206 94 47 chr17 43978942 43978988 -41459492 + MIR SINE MIR 151 193 -69 486 284 132 16 chr17 43979739 43979929 -41458551 + MIR SINE MIR 47 258 -4 364 296 45 45 chr17 43980098 43980277 -41458203 - L2 LINE L2 -6 3266 3088 1951 127 26 10 chr17 43980555 43980862 -41457618 - AluSq SINE Alu -1 312 1 180 278 72 21 chr17 43981056 43981153 -41457327 + L2 LINE L2 2915 3016 -256 775 261 86 4 chr17 43981233 43981467 -41457013 + MIR SINE MIR 6 258 -4 252 0 0 0 chr17 43981514 43981542 -41456938 + (CA)n Simple_repeat Simple_repeat 2 29 0 663 207 11 37 chr17 43981550 43981579 -41456901 - MER3 DNA MER1_type -5 204 176 180 77 0 0 chr17 43981579 43981605 -41456875 + (TTAAA)n Simple_repeat Simple_repeat 5 30 0 2219 96 0 0 chr17 43981615 43981906 -41456574 - AluSg SINE Alu -19 291 1 2133 114 3 0 chr17 43981906 43982203 -41456277 - AluSp SINE Alu -11 302 5 663 207 11 37 chr17 43982203 43982349 -41456131 - MER3 DNA MER1_type -40 169 22 224 294 0 0 chr17 43982350 43982401 -41456079 + L2 LINE L2 3192 3242 -30 29 90 0 0 chr17 43984705 43984783 -41453697 + GC_rich Low_complexity Low_complexity 1 78 0 209 105 79 0 chr17 43984835 43984873 -41453607 + G-rich Low_complexity Low_complexity 2 42 0 54 56 0 0 chr17 43985140 43985229 -41453251 + GC_rich Low_complexity Low_complexity 1 89 0 24 85 0 0 chr17 43985326 43985385 -41453095 + GC_rich Low_complexity Low_complexity 1 59 0 31 68 0 0 chr17 43985560 43985619 -41452861 + GC_rich Low_complexity Low_complexity 1 59 0 188 236 80 94 chr17 43991087 43991187 -41447293 - MIR SINE MIR -10 252 152 729 197 0 23 chr17 43991187 43991319 -41447161 - FLAM_A SINE Alu -2 131 3 1861 106 87 0 chr17 43991328 43991603 -41446877 - AluSx SINE Alu -13 299 1 188 236 80 94 chr17 43991603 43991650 -41446830 - MIR SINE MIR -118 144 101 2090 110 0 20 chr17 43991690 43991991 -41446489 + AluSg SINE Alu 5 299 -11 1062 146 114 41 chr17 43992042 43992128 -41446352 - MER2 DNA MER2_type -80 265 187 2260 113 0 3 chr17 43992128 43992439 -41446041 - AluSx SINE Alu -2 310 1 1062 146 114 41 chr17 43992439 43992598 -41445882 - MER2 DNA MER2_type -158 187 2 232 290 108 11 chr17 43992756 43992849 -41445631 + MIR SINE MIR 47 148 -114 2506 59 0 0 chr17 43994346 43994649 -41443831 - AluSc SINE Alu -4 305 3 645 196 109 7 chr17 43994651 43994789 -41443691 - FRAM SINE Alu -14 162 11 321 169 0 0 chr17 43994802 43994861 -41443619 + (TCCTG)n Simple_repeat Simple_repeat 2 60 0 1067 213 19 5 chr17 43995973 43996184 -41442296 + MER20 DNA MER1_type 3 216 -3 200 256 0 0 chr17 43996197 43996236 -41442244 + polypyrimidine Low_complexity Low_complexity 2 40 0 903 106 16 0 chr17 43996269 43996392 -41442088 + AluSg/x SINE Alu 154 278 -32 1149 171 117 7 chr17 43996414 43996688 -41441792 - L1MB8 LINE L1 -52 6126 5823 2095 141 3 6 chr17 43996688 43997001 -41441479 - AluSx SINE Alu 0 312 1 1239 181 108 25 chr17 43997003 43997280 -41441200 - AluJo SINE Alu -7 305 6 1864 157 3 7 chr17 43997302 43997602 -41440878 - AluJb SINE Alu -13 299 1 1117 153 18 31 chr17 43997604 43997832 -41440648 - L1MB8 LINE L1 -495 5689 5465 556 217 147 40 chr17 43997832 43997973 -41440507 - MLT2D LTR ERVL -101 313 144 7292 56 26 0 chr17 43997973 43998847 -41439633 - MER11D LTR ERVK 0 897 1 556 217 147 40 chr17 43998847 43998903 -41439577 - MLT2D LTR ERVL -270 144 95 493 278 127 19 chr17 43998944 43999149 -41439331 - L1MB8 LINE L1 -812 5334 5108 2468 62 0 0 chr17 43999162 43999466 -41439014 + AluY SINE Alu 1 304 -7 1883 126 18 0 chr17 43999489 43999767 -41438713 + AluSx SINE Alu 21 303 -9 868 111 0 44 chr17 43999783 43999918 -41438562 + AluJ SINE Alu 4 132 -170 23 0 0 0 chr17 43999918 43999941 -41438539 + AT_rich Low_complexity Low_complexity 1 23 0 2179 104 13 0 chr17 43999947 44000245 -41438235 + AluSx SINE Alu 2 303 -9 215 283 56 40 chr17 44000667 44000820 -41437660 - MIR3 SINE MIR -10 198 47 271 219 178 0 chr17 44000820 44000893 -41437587 + MER45A DNA AcHobo 1 86 -92 827 216 0 0 chr17 44000895 44001057 -41437423 + AluJ SINE Alu 137 298 -14 4249 193 35 49 chr17 44001127 44002094 -41436386 + LTR13 LTR ERVK 1 954 0 2053 102 0 0 chr17 44002094 44002359 -41436121 - AluSq SINE Alu -48 265 1 360 139 42 0 chr17 44002363 44002435 -41436045 + MER45A DNA AcHobo 104 178 0 1088 163 5 24 chr17 44002460 44002490 -41435990 + AluSg/x SINE Alu 106 135 -175 1796 126 0 22 chr17 44002490 44002761 -41435719 + AluSx SINE Alu 41 305 -7 1088 163 5 24 chr17 44002761 44002939 -41435541 + AluSg/x SINE Alu 135 310 0 316 325 18 9 chr17 44003382 44003496 -41434984 + MIR3 SINE MIR 2 116 -92 1660 161 45 11 chr17 44003514 44003800 -41434680 - AluJo SINE Alu -4 308 13 2071 115 14 3 chr17 44003835 44004131 -41434349 - AluJb SINE Alu -13 299 1 437 323 110 8 chr17 44004249 44004477 -41434003 + MIR SINE MIR 1 248 -14 353 294 49 56 chr17 44005339 44005482 -41432998 + MIR SINE MIR 90 231 -31 2130 121 0 13 chr17 44005814 44006128 -41432352 - AluSx SINE Alu 0 312 3 188 184 0 0 chr17 44006133 44006171 -41432309 - MIR SINE MIR -65 143 106 298 189 198 9 chr17 44006310 44006421 -41432059 - MIR SINE MIR -14 248 117 1549 130 0 67 chr17 44006433 44006718 -41431762 + AluJb SINE Alu 24 289 -23 1068 154 12 0 chr17 44006733 44006902 -41431578 + FRAM SINE Alu 1 167 -9 1958 105 87 0 chr17 44006902 44007188 -41431292 + AluSp SINE Alu 1 311 -2 288 294 17 42 chr17 44007189 44007308 -41431172 - MER20B DNA MER1_type -379 404 289 1127 131 86 20 chr17 44007318 44007516 -41430964 + AluJb SINE Alu 86 296 -16 610 261 42 73 chr17 44007518 44007805 -41430675 - MER20B DNA MER1_type -500 283 6 328 284 43 43 chr17 44008003 44008165 -41430315 - L1MC/D LINE L1 -2083 5725 5564 301 320 0 31 chr17 44008373 44008470 -41430010 + L1MC3 LINE L1 6552 6645 -1140 * 384 302 8 0 chr17 44008385 44008511 -41429969 - L1MCa LINE L1 -1339 6983 1996 1471 106 0 0 chr17 44008516 44008714 -41429766 - AluSg/x SINE Alu -9 301 104 1832 128 40 24 chr17 44008733 44009031 -41429449 - AluJo SINE Alu -9 303 1 540 204 19 38 chr17 44009033 44009190 -41429290 - L1MC4 LINE L1 -141 7901 7748 1540 131 0 0 chr17 44009190 44009404 -41429076 + AluSx SINE Alu 1 214 -98 881 109 73 0 chr17 44009404 44009521 -41428959 + AluSq/x SINE Alu 4 134 -178 441 36 0 0 chr17 44009521 44009576 -41428904 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 881 109 73 0 chr17 44009576 44009595 -41428885 + AluSq/x SINE Alu 134 150 -162 2814 19 0 0 chr17 44009738 44010054 -41428426 + AluYb8 SINE Alu 1 316 -2 521 245 32 45 chr17 44011246 44011401 -41427079 - MIR SINE MIR -15 247 95 261 345 92 0 chr17 44011508 44011627 -41426853 + MIR3 SINE MIR 51 180 -28 2034 106 0 0 chr17 44011742 44012044 -41426436 - AluSx SINE Alu 0 315 14 254 194 60 0 chr17 44012400 44012467 -41426013 + C-rich Low_complexity Low_complexity 6 76 0 180 200 75 0 chr17 44012685 44012725 -41425755 + MIR SINE MIR 104 146 -62 2274 72 0 3 chr17 44012732 44013025 -41425455 - AluSp SINE Alu -21 292 1 2327 48 10 0 chr17 44013025 44013314 -41425166 - AluSq SINE Alu -21 292 1 23 0 0 0 chr17 44013867 44013890 -41424590 + GC_rich Low_complexity Low_complexity 1 23 0 1642 103 45 51 chr17 44013910 44014202 -41424278 + AluJb SINE Alu 1 290 -22 21 0 0 0 chr17 44014387 44014408 -41424072 + GC_rich Low_complexity Low_complexity 1 21 0 204 274 0 27 chr17 44014574 44014647 -41423833 + G-rich Low_complexity Low_complexity 3 73 0 265 345 60 0 chr17 44015175 44015291 -41423189 + MIR SINE MIR 81 203 -59 2103 89 10 24 chr17 44015333 44015625 -41422855 + AluSc SINE Alu 1 288 -21 2048 139 0 0 chr17 44016050 44016351 -41422129 + AluSx SINE Alu 1 301 -11 1968 131 3 14 chr17 44017012 44017309 -41421171 - AluSx SINE Alu -18 294 1 301 250 120 30 chr17 44018280 44018380 -41420100 + MIR SINE MIR 55 163 -99 2183 103 0 0 chr17 44019873 44020164 -41418316 + AluSc SINE Alu 1 291 -18 212 295 95 29 chr17 44021306 44021411 -41417069 - L2 LINE L2 -3 3269 3158 581 242 124 7 chr17 44021420 44021573 -41416907 - L2 LINE L2 -1 3271 3101 226 318 103 8 chr17 44021916 44022042 -41416438 - MIR SINE MIR -68 194 57 1996 110 0 70 chr17 44022127 44022454 -41416026 + AluSx SINE Alu 1 304 -8 41 72 0 0 chr17 44023861 44023944 -41414536 + GC_rich Low_complexity Low_complexity 1 83 0 180 0 0 0 chr17 44025268 44025288 -41413192 + (TGG)n Simple_repeat Simple_repeat 3 22 0 2280 61 41 0 chr17 44025303 44025596 -41412884 + AluSp SINE Alu 1 305 -8 501 299 120 47 chr17 44027703 44027937 -41410543 - MIR SINE MIR -11 251 1 265 193 228 61 chr17 44028150 44028264 -41410216 + MIR SINE MIR 35 167 -95 380 327 87 14 chr17 44028933 44029141 -41409339 - MIR SINE MIR -20 242 20 195 100 0 0 chr17 44030898 44030928 -41407552 + (CCTCG)n Simple_repeat Simple_repeat 1 30 0 391 75 0 30 chr17 44032100 44032167 -41406313 - U6 snRNA snRNA -23 84 20 2016 108 36 0 chr17 44032344 44032654 -41405826 - AluSx SINE Alu 0 312 1 3321 157 9 66 chr17 44032655 44032948 -41405532 - L1MB3 LINE L1 -42 6141 5833 2197 117 7 0 chr17 44032948 44033257 -41405223 + AluSx SINE Alu 2 312 0 3321 157 9 66 chr17 44033257 44033351 -41405129 - L1MB3 LINE L1 -350 5833 5735 1936 166 66 56 chr17 44033351 44033395 -41405085 + MSTD LTR MaLR 1 43 -353 1860 160 0 26 chr17 44033395 44033701 -41404779 - AluSx SINE Alu -14 298 1 1620 176 0 77 chr17 44033701 44034024 -41404456 - AluJo SINE Alu -14 298 1 1936 166 66 56 chr17 44034024 44034370 -41404110 + MSTD LTR MaLR 42 396 0 3321 157 9 66 chr17 44034370 44034621 -41403859 - L1MB3 LINE L1 -448 5735 5551 2409 66 7 0 chr17 44034621 44034925 -41403555 - AluY SINE Alu -5 306 1 3321 157 9 66 chr17 44034925 44035057 -41403423 - L1MB3 LINE L1 -632 5551 5413 871 222 26 0 chr17 44035069 44035263 -41403217 - U3 snRNA snRNA 0 217 19 1239 177 0 5 chr17 44035278 44035487 -41402993 + AluJb SINE Alu 101 308 -4 2071 139 0 3 chr17 44035489 44035792 -41402688 + AluSx SINE Alu 1 302 -10 1672 211 9 77 chr17 44035812 44036440 -41402040 - L1MB3 LINE L1 -741 5442 4855 1882 92 36 0 chr17 44036440 44036689 -41401791 - AluSx SINE Alu -54 258 1 303 161 0 0 chr17 44036708 44036770 -41401710 + Alu SINE Alu 235 296 -6 724 194 0 43 chr17 44036784 44036923 -41401557 + FLAM_A SINE Alu 1 133 0 1914 155 3 7 chr17 44036941 44037244 -41401236 + AluJb SINE Alu 1 302 -10 583 241 39 29 chr17 44037248 44037455 -41401025 - L1MB3 LINE L1 -1295 4851 4643 379 266 35 7 chr17 44037467 44037610 -41400870 - LTR50 LTR ERVL -646 149 3 1434 84 5 42 chr17 44038035 44038250 -41400230 - AluSq SINE Alu -106 207 1 2111 85 0 56 chr17 44038265 44038606 -41399874 - AluSg SINE Alu 0 324 1 431 299 45 19 chr17 44038643 44038941 -41399539 - ERVL LTR ERVL -523 5241 4870 1470 235 77 81 chr17 44038944 44039241 -41399239 + LTR16C LTR ERVL 1 298 -193 243 87 22 0 chr17 44039241 44039287 -41399193 + (TTTG)n Simple_repeat Simple_repeat 2 180 0 2220 92 3 0 chr17 44039287 44039571 -41398909 - AluSp SINE Alu -28 285 1 1470 235 77 81 chr17 44039571 44039765 -41398715 + LTR16C LTR ERVL 296 491 0 1784 327 90 52 chr17 44039766 44040013 -41398467 + HERV16 LTR ERVL 2 238 -5526 1957 138 3 3 chr17 44040013 44040311 -41398169 + AluSx SINE Alu 1 298 -14 1784 327 90 52 chr17 44040311 44040419 -41398061 + HERV16 LTR ERVL 238 340 -5424 1714 139 64 0 chr17 44040419 44040686 -41397794 + AluJb SINE Alu 14 297 -15 1784 327 90 52 chr17 44040686 44041246 -41397234 + HERV16 LTR ERVL 340 877 -4887 2075 113 0 10 chr17 44041246 44041547 -41396933 + AluSx SINE Alu 1 298 -14 1784 327 90 52 chr17 44041547 44041604 -41396876 + HERV16 LTR ERVL 877 930 -4834 2098 116 3 0 chr17 44041604 44041950 -41396530 - AluSx SINE Alu 0 312 1 1784 327 90 52 chr17 44041950 44042623 -41395857 + HERV16 LTR ERVL 930 1576 -4188 2278 86 3 3 chr17 44042623 44042925 -41395555 - AluSx SINE Alu 0 312 11 1784 327 90 52 chr17 44042925 44043329 -41395151 + HERV16 LTR ERVL 1576 1963 -3801 1488 184 17 10 chr17 44043329 44043617 -41394863 + AluJb SINE Alu 18 307 -5 1784 327 90 52 chr17 44043617 44043960 -41394520 + HERV16 LTR ERVL 1963 2292 -3472 2080 117 0 0 chr17 44043960 44044251 -41394229 + AluSx SINE Alu 2 292 -20 1784 327 90 52 chr17 44044251 44044868 -41393612 + HERV16 LTR ERVL 2292 2884 -2880 2000 113 28 0 chr17 44044868 44045152 -41393328 + AluSx SINE Alu 1 292 -20 1784 327 90 52 chr17 44045152 44045905 -41392575 + HERV16 LTR ERVL 2884 4117 -1647 1774 147 58 3 chr17 44045905 44046081 -41392399 - AluJo SINE Alu -1 311 111 378 0 0 0 chr17 44046081 44046123 -41392357 + (TG)n Simple_repeat Simple_repeat 1 42 0 1774 147 58 3 chr17 44046123 44046239 -41392241 - AluJo SINE Alu -201 111 3 619 131 0 0 chr17 44046239 44046323 -41392157 + AluY SINE Alu 209 292 -19 454 319 7 0 chr17 44046329 44046470 -41392010 + HERV16 LTR ERVL 4719 4860 -904 819 163 0 15 chr17 44046490 44046625 -41391855 - FLAM_C SINE Alu 0 133 1 877 228 0 0 chr17 44046647 44046805 -41391675 - FAM SINE Alu -17 158 1 586 317 28 43 chr17 44046881 44047206 -41391274 + HERV16 LTR ERVL 4914 5233 -531 2706 137 21 27 chr17 44047215 44047426 -41391054 + L1MB7 LINE L1 5703 5914 -270 2205 104 3 0 chr17 44047426 44047725 -41390755 - AluSq SINE Alu -13 300 1 2706 137 21 27 chr17 44047725 44047989 -41390491 + L1MB7 LINE L1 5914 6175 -9 269 211 14 0 chr17 44047992 44048063 -41390417 - L1MEc LINE L1 -4410 1986 1915 2008 129 10 0 chr17 44048121 44048416 -41390064 + 7SLRNA srpRNA srpRNA 1 298 -22 2371 76 0 10 chr17 44048416 44048720 -41389760 + AluY SINE Alu 1 301 -10 463 226 5 168 chr17 44048749 44048903 -41389577 - L1 LINE L1 -760 5386 5280 1597 148 59 7 chr17 44048903 44049173 -41389307 - AluJo SINE Alu -22 290 7 463 226 5 168 chr17 44049173 44049267 -41389213 - L1 LINE L1 -866 5280 5172 728 239 0 0 chr17 44049290 44049432 -41389048 - FLAM_A SINE Alu 0 142 1 1218 85 44 114 chr17 44049433 44049588 -41388892 + Tigger7 DNA MER2_type 2240 2370 -121 1958 90 76 17 chr17 44049588 44049876 -41388604 + AluSx SINE Alu 1 305 -7 1218 85 44 114 chr17 44049876 44049991 -41388489 + Tigger7 DNA MER2_type 2370 2491 0 187 119 0 119 chr17 44050095 44050113 -41388367 - L2 LINE L2 -7 3306 3294 2119 97 17 0 chr17 44050113 44050403 -41388077 + AluSq SINE Alu 1 295 -18 187 119 0 119 chr17 44050403 44050426 -41388054 - L2 LINE L2 -19 3294 3270 219 300 25 0 chr17 44050619 44050699 -41387781 - L2 LINE L2 -856 2458 2377 808 136 25 6 chr17 44050919 44051171 -41387309 + AluJ SINE Alu 1 296 -16 2168 129 0 0 chr17 44051769 44052072 -41386408 + AluSx SINE Alu 1 303 -9 938 261 8 39 chr17 44052112 44052369 -41386111 - MIR SINE MIR 0 262 14 2141 112 0 3 chr17 44052424 44052718 -41385762 - AluSg SINE Alu -15 295 3 1662 113 3 103 chr17 44052721 44053056 -41385424 - AluY SINE Alu 0 304 1 2115 125 0 7 chr17 44053061 44053365 -41385115 - AluJb SINE Alu -10 302 1 2031 134 3 0 chr17 44053474 44053780 -41384700 - AluSc SINE Alu 0 309 3 870 153 15 0 chr17 44053785 44053922 -41384558 - AluSq/x SINE Alu -172 141 3 355 240 139 87 chr17 44054120 44054227 -41384253 - L1MC5 LINE L1 -1051 6910 6810 1787 139 7 45 chr17 44054227 44054394 -41384086 - AluJb SINE Alu -12 300 149 2307 89 0 0 chr17 44054394 44054686 -41383794 - AluSc SINE Alu -17 292 1 1787 139 7 45 chr17 44054686 44054828 -41383652 - AluJb SINE Alu -163 149 3 355 240 139 87 chr17 44054828 44054928 -41383552 - L1MC5 LINE L1 -1151 6810 6692 291 201 101 108 chr17 44055334 44055473 -41383007 + L2 LINE L2 3170 3307 -6 2036 121 3 13 chr17 44055861 44056175 -41382305 + AluSx SINE Alu 1 311 -1 1805 156 20 0 chr17 44056184 44056479 -41382001 + AluJo SINE Alu 5 305 -7 310 356 32 21 chr17 44056905 44057027 -41381453 - MIR SINE MIR 0 262 136 2253 94 0 3 chr17 44057027 44057325 -41381155 - AluSx SINE Alu -15 297 1 310 356 32 21 chr17 44057325 44057390 -41381090 - MIR SINE MIR -126 136 73 315 0 0 0 chr17 44058045 44058080 -41380400 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2055 113 0 7 chr17 44058082 44058365 -41380115 - AluSx SINE Alu -31 281 1 379 210 13 0 chr17 44059546 44059634 -41378846 + MIR SINE MIR 44 132 -76 2031 154 3 0 chr17 44059824 44060135 -41378345 - AluSq SINE Alu -1 312 1 962 36 0 93 chr17 44060147 44060286 -41378194 - L1MA1 LINE L1 0 6302 6177 2004 128 0 20 chr17 44060319 44060623 -41377857 - AluJb SINE Alu -14 298 1 932 95 0 29 chr17 44061617 44061754 -41376726 - FLAM_C SINE Alu 0 133 1 427 257 82 37 chr17 44061817 44062005 -41376475 + MIR SINE MIR 16 206 -56 * 481 271 39 32 chr17 44061989 44062144 -41376336 - L2 LINE L2 -2 3311 3156 2178 100 0 0 chr17 44062153 44062550 -41375930 + AluSg SINE Alu 1 397 0 864 210 120 43 chr17 44062602 44062797 -41375683 + MLT1J LTR MaLR 3 220 -291 2176 104 3 10 chr17 44062797 44062932 -41375548 + AluSp SINE Alu 1 135 -178 2299 98 0 3 chr17 44062932 44063237 -41375243 + AluSg SINE Alu 1 304 -6 2176 104 3 10 chr17 44063237 44063408 -41375072 + AluSp SINE Alu 135 305 -8 864 210 120 43 chr17 44063408 44063445 -41375035 + MLT1J LTR MaLR 220 253 -258 883 110 0 0 chr17 44063483 44063601 -41374879 - FLAM_C SINE Alu -25 118 1 309 180 0 0 chr17 44063602 44063663 -41374817 + MLT1J LTR MaLR 429 489 -22 325 264 44 0 chr17 44063735 44063826 -41374654 - L2 LINE L2 -264 3049 2955 659 281 85 27 chr17 44063893 44064221 -41374259 - L2 LINE L2 -548 2766 2420 2020 152 0 0 chr17 44064333 44064630 -41373850 - AluSx SINE Alu -15 297 1 872 137 0 0 chr17 44064684 44064808 -41373672 - AluJb SINE Alu -187 125 2 212 364 82 62 chr17 44064832 44065173 -41373307 - L2 LINE L2 -1 3271 2924 1742 159 3 17 chr17 44065356 44065652 -41372828 - AluSx SINE Alu -10 302 11 1591 157 20 56 chr17 44065659 44065965 -41372515 - AluJo SINE Alu -11 301 7 193 289 0 0 chr17 44066252 44066297 -41372183 + L3b LINE CR1 1519 1563 -20 184 259 19 0 chr17 44066742 44066796 -41371684 - MIR SINE MIR -72 136 82 2000 146 10 0 chr17 44067457 44067810 -41370670 + AluJb SINE Alu 1 356 0 2131 117 20 0 chr17 44068393 44068692 -41369788 + AluSx SINE Alu 1 305 -7 2262 95 20 0 chr17 44068692 44068998 -41369482 + AluSq SINE Alu 1 312 -1 225 399 46 32 chr17 44069540 44069758 -41368722 + MIR SINE MIR 21 241 -21 196 175 0 0 chr17 44069787 44069827 -41368653 + MIR SINE MIR 106 145 -117 436 287 9 0 chr17 44070065 44070180 -41368300 - MIR3 SINE MIR -40 168 53 1136 215 50 12 chr17 44071825 44072067 -41366413 - MIR SINE MIR 0 262 12 438 294 62 25 chr17 44072106 44072266 -41366214 + MIR SINE MIR 7 172 -90 322 229 195 24 chr17 44072694 44072847 -41365633 - MIR SINE MIR -61 147 7 200 244 0 81 chr17 44072966 44073052 -41365428 + GA-rich Low_complexity Low_complexity 2 80 0 1722 68 5 0 chr17 44073269 44073488 -41364992 - AluSg/x SINE Alu -6 304 85 2364 61 0 7 chr17 44073602 44073899 -41364581 + AluY SINE Alu 1 295 -16 190 245 184 0 chr17 44074299 44074348 -41364132 + L2 LINE L2 3247 3304 -9 408 335 7 26 chr17 44074620 44074775 -41363705 - L2 LINE L2 -3 3310 3159 1840 171 16 0 chr17 44074790 44075095 -41363385 - AluJb SINE Alu -2 310 1 867 206 53 0 chr17 44075107 44075277 -41363203 + FRAM SINE Alu 1 171 -5 976 191 32 64 chr17 44075295 44075515 -41362965 + AluJo SINE Alu 99 311 -1 424 92 13 13 chr17 44075515 44075591 -41362889 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 540 276 87 5 chr17 44075624 44075886 -41362594 - L2 LINE L2 -254 3059 2777 425 309 0 7 chr17 44080275 44080411 -41358069 + (GTCTG)n Simple_repeat Simple_repeat 1 135 0 2207 117 0 0 chr17 44081981 44082281 -41356199 + AluSx SINE Alu 1 300 -12 839 155 32 0 chr17 44083054 44083339 -41355141 + (TGGA)n Simple_repeat Simple_repeat 1 294 0 552 269 26 6 chr17 44084314 44084470 -41354010 + MIR SINE MIR 31 189 -73 808 188 40 51 chr17 44084923 44084997 -41353483 - MER69A DNA AcHobo -2349 177 104 2374 79 0 3 chr17 44084997 44085302 -41353178 + AluSq SINE Alu 1 304 -9 2118 126 17 0 chr17 44085304 44085605 -41352875 + AluSg SINE Alu 2 307 -3 808 188 40 51 chr17 44085605 44085703 -41352777 - MER69A DNA AcHobo -2423 103 4 367 286 129 14 chr17 44086421 44086568 -41351912 + MIR3 SINE MIR 36 199 -9 448 217 133 0 chr17 44086801 44086921 -41351559 + MIR SINE MIR 16 151 -111 1989 95 81 0 chr17 44086942 44087227 -41351253 + AluSg SINE Alu 1 308 -2 1672 167 0 27 chr17 44087258 44087551 -41350929 + AluJb SINE Alu 28 312 0 294 310 56 20 chr17 44088184 44088330 -41350150 + MIR SINE MIR 11 158 -68 542 194 54 31 chr17 44089171 44089300 -41349180 + MIR SINE MIR 75 206 -56 299 194 19 126 chr17 44089356 44089460 -41349020 - MIR SINE MIR -107 101 10 228 61 0 0 chr17 44089660 44089693 -41348787 - L2 LINE L2 0 3272 3240 448 113 0 0 chr17 44090111 44090173 -41348307 + AluS SINE Alu 1 62 -247 2051 124 24 0 chr17 44290435 44290725 -41147755 - AluSx SINE Alu -15 297 1 2021 102 57 3 chr17 44290870 44291153 -41147327 + AluSx SINE Alu 1 298 -14 1178 184 0 15 chr17 44291255 44291390 -41147090 + AluJb SINE Alu 1 134 -178 1993 106 44 10 chr17 44291390 44291683 -41146797 + AluY SINE Alu 1 303 -8 1178 184 0 15 chr17 44291683 44291743 -41146737 + AluJb SINE Alu 134 193 -119 485 99 37 0 chr17 44291849 44291930 -41146550 - AluS SINE Alu -229 84 1 2016 137 26 10 chr17 44291999 44292306 -41146174 + AluSx SINE Alu 1 312 0 1194 144 0 0 chr17 44292306 44292479 -41146001 + AluSg/x SINE Alu 130 302 -8 228 192 77 0 chr17 44292479 44292521 -41145959 + GA-rich Low_complexity Low_complexity 2 39 -46 736 192 0 0 chr17 44292521 44292651 -41145829 + FLAM_C SINE Alu 1 130 -3 228 192 77 0 chr17 44292651 44292686 -41145794 + GA-rich Low_complexity Low_complexity 39 85 0 2473 83 0 0 chr17 44292807 44293109 -41145371 - AluSg SINE Alu -8 302 1 219 227 25 160 chr17 44293142 44293203 -41145277 + MIR SINE MIR 14 53 -209 873 158 0 0 chr17 44293203 44293336 -41145144 - FLAM_C SINE Alu 0 133 1 219 227 25 160 chr17 44293336 44293393 -41145087 + MIR SINE MIR 53 116 -146 1150 231 18 28 chr17 44293427 44293709 -41144771 - MSTD LTR MaLR -34 362 84 1823 117 24 10 chr17 44293719 44294010 -41144470 - AluSc SINE Alu -14 295 1 2474 93 0 10 chr17 44294130 44294443 -41144037 - AluSx SINE Alu -2 310 1 798 277 50 21 chr17 44294514 44294924 -41143556 - L1MC4a LINE L1 -1884 5924 5467 271 296 83 61 chr17 44294966 44295098 -41143382 + L2 LINE L2 3137 3271 -1 677 47 0 0 chr17 44295168 44295253 -41143227 - AluSg/x SINE Alu -13 297 213 370 176 10 88 chr17 44295450 44295495 -41142985 + L1MC/D LINE L1 5727 5761 -2047 849 193 73 0 chr17 44295495 44295687 -41142793 + MER3 DNA MER1_type 4 209 0 370 176 10 88 chr17 44295687 44295743 -41142737 + L1MC/D LINE L1 5761 5820 -1988 242 262 103 37 chr17 44296097 44296204 -41142276 - L2 LINE L2 0 3313 3200 712 136 85 0 chr17 44296520 44296638 -41141842 + AluSq/x SINE Alu 2 129 -183 2165 113 31 0 chr17 44296645 44296938 -41141542 + AluSx SINE Alu 1 302 -10 2335 98 0 28 chr17 44296940 44297258 -41141222 + AluSp SINE Alu 3 311 -2 34 24 0 0 chr17 44297784 44297825 -41140655 + AT_rich Low_complexity Low_complexity 1 41 0 294 29 0 0 chr17 44297831 44297866 -41140614 + (TG)n Simple_repeat Simple_repeat 2 36 0 1004 104 12 30 chr17 44297975 44298139 -41140341 + AluY SINE Alu 145 305 -6 5213 178 5 22 chr17 44298139 44298625 -41139855 + L1P5 LINE L1 4168 4661 -1490 2134 120 0 10 chr17 44298625 44298917 -41139563 + AluSc SINE Alu 1 289 -20 5213 178 5 22 chr17 44298917 44299811 -41138669 + L1P5 LINE L1 4661 5531 -620 204 299 184 0 chr17 44300053 44300140 -41138340 - L2 LINE L2 -2 3270 3168 288 130 0 0 chr17 44300146 44300192 -41138288 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 2325 106 3 3 chr17 44300310 44300613 -41137867 + AluSc SINE Alu 1 303 -6 2146 144 3 0 chr17 44300695 44301000 -41137480 - AluSx SINE Alu -6 306 1 1709 177 0 33 chr17 44301003 44301165 -41137315 - AluJb SINE Alu -17 295 146 2218 100 7 17 chr17 44301165 44301464 -41137016 - AluSq SINE Alu -17 296 1 1709 177 0 33 chr17 44301464 44301606 -41136874 - AluJb SINE Alu -166 146 1 270 61 0 0 chr17 44301821 44301854 -41136626 - U4 snRNA snRNA -112 33 1 1844 142 13 70 chr17 44301855 44302171 -41136309 - AluJb SINE Alu -14 298 1 2553 65 0 7 chr17 44302184 44302494 -41135986 - AluY SINE Alu -3 308 1 229 200 0 0 chr17 44302501 44302546 -41135934 - L1MC/D LINE L1 -1877 5931 5887 2211 119 3 0 chr17 44302549 44302842 -41135638 - AluSp SINE Alu -19 294 1 1533 161 3 67 chr17 44302842 44303140 -41135340 - AluJb SINE Alu -16 296 18 221 158 26 0 chr17 44303249 44303287 -41135193 + GA-rich Low_complexity Low_complexity 4 42 0 391 165 11 11 chr17 44303300 44303391 -41135089 + GA-rich Low_complexity Low_complexity 1 91 0 296 221 12 35 chr17 44303413 44303499 -41134981 - L1MEd LINE L1 -6033 86 3 180 296 46 28 chr17 44303503 44303611 -41134869 - MIR SINE MIR -48 214 105 * 218 313 36 36 chr17 44303586 44303669 -41134811 + MIR SINE MIR 21 103 -105 274 216 20 78 chr17 44303898 44304000 -41134480 - MER5B DNA MER1_type -29 149 54 2360 107 3 0 chr17 44304074 44304383 -41134097 + AluSx SINE Alu 1 310 -2 2523 67 3 13 chr17 44304385 44304699 -41133781 + AluY SINE Alu 1 311 0 2295 121 0 0 chr17 44304927 44305224 -41133256 - AluSx SINE Alu -15 297 1 2360 108 0 6 chr17 44305604 44305918 -41132562 + AluSx SINE Alu 1 312 0 183 344 48 24 chr17 44306082 44306207 -41132273 - L2 LINE L2 -1312 2002 1875 429 229 82 77 chr17 44306444 44306627 -41131853 + L1MC4 LINE L1 7440 7623 -419 1980 134 51 0 chr17 44306632 44306924 -41131556 + AluSq SINE Alu 7 313 0 1212 152 10 20 chr17 44306934 44307131 -41131349 + AluJo SINE Alu 3 197 -115 279 0 0 0 chr17 44307232 44307263 -41131217 + (TA)n Simple_repeat Simple_repeat 1 31 0 930 97 16 0 chr17 44307263 44307387 -41131093 - AluY SINE Alu -185 126 1 281 146 0 0 chr17 44307387 44307435 -41131045 - L1 LINE L1 -1971 4175 4128 327 364 68 11 chr17 44307435 44307611 -41130869 + MIR SINE MIR 67 252 -10 2131 140 3 0 chr17 44307802 44308102 -41130378 - AluSx SINE Alu -11 301 1 1808 172 7 0 chr17 44308104 44308394 -41130086 - AluJb SINE Alu -20 292 1 1726 176 3 29 chr17 44308630 44308936 -41129544 + AluJo SINE Alu 1 298 -14 1191 53 0 0 chr17 44308938 44309070 -41129410 + AluY SINE Alu 1 132 -179 188 83 0 28 chr17 44309108 44309144 -41129336 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 316 285 57 0 chr17 44309226 44309349 -41129131 + MIR SINE MIR 49 178 -84 1545 179 13 33 chr17 44309415 44309583 -41128897 - AluJb SINE Alu -16 296 135 1917 129 39 0 chr17 44309583 44309869 -41128611 - AluSg SINE Alu -13 297 1 1545 179 13 33 chr17 44309869 44310002 -41128478 - AluJb SINE Alu -177 135 1 920 153 0 0 chr17 44310004 44310141 -41128339 - FLAM_C SINE Alu -6 137 1 2338 104 0 0 chr17 44310299 44310596 -41127884 - AluSx SINE Alu -13 299 3 587 250 58 89 chr17 44310677 44310692 -41127788 - L1M4 LINE L1 -3238 2908 2894 1841 152 14 20 chr17 44310692 44310988 -41127492 - AluJo SINE Alu -18 294 1 587 250 58 89 chr17 44310988 44311017 -41127463 - L1M4 LINE L1 -3252 2894 2866 2141 116 3 0 chr17 44311017 44311302 -41127178 - AluSg SINE Alu -22 288 3 587 250 58 89 chr17 44311302 44311670 -41126810 - L1M4 LINE L1 -3280 2866 2510 2555 55 3 3 chr17 44311670 44311979 -41126501 - AluY SINE Alu -2 309 1 587 250 58 89 chr17 44311979 44312048 -41126432 - L1M4 LINE L1 -3636 2510 2440 718 145 14 22 chr17 44312058 44312196 -41126284 - AluY SINE Alu -15 296 160 1205 245 65 15 chr17 44312301 44312640 -41125840 - L1ME LINE L1 -366 5804 5449 2214 92 4 0 chr17 44312645 44312954 -41125526 - AluSp SINE Alu 0 310 1 430 217 56 75 chr17 44312980 44313004 -41125476 - MIR SINE MIR -42 220 197 2087 132 10 0 chr17 44313004 44313300 -41125180 - AluSx SINE Alu -13 299 1 430 217 56 75 chr17 44313300 44313436 -41125044 - MIR SINE MIR -65 197 63 237 253 71 50 chr17 44313660 44313759 -41124721 + MIR SINE MIR 148 248 -14 214 217 0 0 chr17 44313733 44313779 -41124701 + L2 LINE L2 3227 3272 0 * 405 103 23 23 chr17 44314182 44314269 -41124211 + (GGA)n Simple_repeat Simple_repeat 2 88 0 541 163 92 215 chr17 44314877 44315093 -41123387 - L1MC4 LINE L1 0 8042 7912 2049 153 0 6 chr17 44315093 44315406 -41123074 + AluJb SINE Alu 1 311 -1 541 163 92 215 chr17 44315406 44315654 -41122826 - L1MC4 LINE L1 -130 7912 7635 863 147 0 0 chr17 44315668 44315797 -41122683 - AluJb SINE Alu -21 291 163 667 199 165 34 chr17 44315986 44316192 -41122288 - MIR SINE MIR -11 251 19 968 141 7 0 chr17 44317056 44317198 -41121282 + FLAM_C SINE Alu 1 143 0 2129 130 0 19 chr17 44317206 44317514 -41120966 + AluSx SINE Alu 1 302 -10 488 247 187 0 chr17 44318401 44318567 -41119913 - L2 LINE L2 0 3313 3117 2118 105 14 7 chr17 44318797 44319092 -41119388 - AluSx SINE Alu -15 297 1 1440 137 62 78 chr17 44319092 44319398 -41119082 - AluJb SINE Alu -10 302 1 2240 71 7 52 chr17 44319409 44319718 -41118762 - AluY SINE Alu -16 295 1 24 0 0 0 chr17 44319791 44319815 -41118665 + AT_rich Low_complexity Low_complexity 1 24 0 2174 119 0 22 chr17 44319820 44320132 -41118348 + AluSp SINE Alu 1 305 -8 1223 44 0 0 chr17 44320132 44320267 -41118213 + AluSq/x SINE Alu 1 135 -178 2397 86 3 7 chr17 44320267 44320571 -41117909 + AluSc SINE Alu 1 303 -6 398 221 144 9 chr17 44320741 44320893 -41117587 - MLT1C LTR MaLR 0 467 321 724 204 0 0 chr17 44320893 44321030 -41117450 - FLAM_C SINE Alu -5 138 2 1146 178 74 58 chr17 44321031 44321164 -41117316 - MLT1C LTR MaLR -153 314 185 2391 94 0 3 chr17 44321164 44321462 -41117018 - AluSp SINE Alu -14 299 3 1146 178 74 58 chr17 44321462 44321637 -41116843 - MLT1C LTR MaLR -282 185 1 297 254 42 0 chr17 44321648 44321719 -41116761 - L2 LINE L2 -47 3266 3193 1491 135 10 0 chr17 44321741 44321948 -41116532 - AluJb SINE Alu -19 293 85 34 24 0 0 chr17 44321951 44321992 -41116488 + AT_rich Low_complexity Low_complexity 1 41 0 2217 124 13 0 chr17 44321992 44322299 -41116181 - AluSq SINE Alu -2 311 1 2331 94 7 3 chr17 44322375 44322684 -41115796 - AluSg SINE Alu 0 310 1 255 220 68 0 chr17 44322837 44322896 -41115584 + MSTC LTR MaLR 1 63 -365 628 124 10 0 chr17 44322897 44322994 -41115486 - AluSp/q SINE Alu -18 295 198 1938 121 0 82 chr17 44323146 44323461 -41115019 - AluJb SINE Alu -4 308 20 2476 91 0 3 chr17 44323470 44323778 -41114702 - AluSg SINE Alu -3 307 1 2399 53 30 10 chr17 44323780 44324082 -41114398 - AluY SINE Alu -3 308 1 324 306 74 16 chr17 44324786 44324907 -41113573 + L2 LINE L2 3134 3261 -11 2204 125 0 0 chr17 44324995 44325292 -41113188 + AluSx SINE Alu 1 297 -15 203 86 0 29 chr17 44325321 44325356 -41113124 + (GAA)n Simple_repeat Simple_repeat 2 35 0 486 300 56 0 chr17 44325954 44326114 -41112366 + MIR SINE MIR 23 191 -71 203 167 0 24 chr17 44327203 44327245 -41111235 + (CCG)n Simple_repeat Simple_repeat 2 42 0 2416 40 17 0 chr17 44327543 44327842 -41110638 - AluYa5 SINE Alu -7 304 1 772 191 12 6 chr17 44327979 44328152 -41110328 - L1MA4 LINE L1 0 6300 6127 709 172 77 47 chr17 44328155 44328324 -41110156 - FRAM SINE Alu -8 168 1 816 124 0 39 chr17 44328341 44328470 -41110010 + FLAM_C SINE Alu 1 124 -19 24 0 0 0 chr17 44328473 44328497 -41109983 + AT_rich Low_complexity Low_complexity 1 24 0 2459 60 7 3 chr17 44328506 44328804 -41109676 + AluY SINE Alu 1 299 -12 673 133 165 6 chr17 44328805 44328963 -41109517 - L1MA4 LINE L1 -154 6146 5964 2464 69 10 0 chr17 44328971 44329275 -41109205 - AluSx SINE Alu -5 307 1 248 291 54 34 chr17 44332367 44332515 -41105965 - MIR SINE MIR -15 247 97 2348 74 17 10 chr17 44332516 44332812 -41105668 + AluSx SINE Alu 1 298 -14 390 263 102 0 chr17 44333675 44333793 -41104687 - MIR SINE MIR -70 192 63 2312 101 7 3 chr17 44334177 44334485 -41103995 - AluSc SINE Alu 0 309 1 1010 134 7 0 chr17 44334670 44334812 -41103668 + AluSg/x SINE Alu 146 288 -22 310 288 151 14 chr17 44336701 44336847 -41101633 + MER5A DNA MER1_type 18 183 -6 2088 122 14 0 chr17 44339751 44340046 -41098434 + AluSx SINE Alu 1 299 -13 4024 148 58 6 chr17 44340512 44340750 -41097730 - L1MC1 LINE L1 0 6333 6109 2092 113 3 13 chr17 44340750 44341050 -41097430 - AluSx SINE Alu -15 297 1 4024 148 58 6 chr17 44341050 44341499 -41096981 - L1MC1 LINE L1 -224 6109 5610 258 32 0 0 chr17 44341612 44341643 -41096837 + (A)n Simple_repeat Simple_repeat 1 31 0 246 109 0 47 chr17 44342536 44342600 -41095880 + (CCCCG)n Simple_repeat Simple_repeat 2 62 0 27 0 0 0 chr17 44342714 44342741 -41095739 + GC_rich Low_complexity Low_complexity 1 27 0 393 274 29 0 chr17 44343574 44343676 -41094804 - MIR SINE MIR -115 147 43 199 233 137 41 chr17 44343972 44344045 -41094435 - L2 LINE L2 -24 3248 3169 486 260 67 20 chr17 44344711 44344861 -41093619 - L2 LINE L2 -5 3267 3111 364 273 107 38 chr17 44345443 44345643 -41092837 - MIR SINE MIR -19 243 32 1675 168 3 52 chr17 44345650 44345978 -41092502 - AluJo SINE Alu 0 312 1 926 230 25 0 chr17 44346008 44346208 -41092272 - MIR SINE MIR -41 221 17 336 169 38 3 chr17 44346301 44346430 -41092050 - MER53 DNA DNA 0 189 23 * 379 146 61 0 chr17 44346360 44346442 -41092038 + MER53 DNA DNA 103 189 0 393 151 0 0 chr17 44347315 44347401 -41091079 + (CA)n Simple_repeat Simple_repeat 2 87 0 203 211 225 0 chr17 44347579 44347650 -41090830 + MIR3 SINE MIR 104 190 -18 210 250 54 0 chr17 44347992 44348048 -41090432 - L2 LINE L2 -1 3271 3213 260 194 0 15 chr17 44348151 44348218 -41090262 - L1MB8 LINE L1 0 6178 6113 1598 146 4 15 chr17 44348222 44348490 -41089990 + AluJo SINE Alu 33 297 -15 360 111 0 0 chr17 44348619 44348673 -41089807 + (A)n Simple_repeat Simple_repeat 1 54 0 2118 90 7 10 chr17 44348779 44349080 -41089400 - AluSg1 SINE Alu -9 300 1 877 269 16 8 chr17 44349088 44349341 -41089139 - L1MC4 LINE L1 -1033 7009 6755 200 211 18 18 chr17 44350702 44350759 -41087721 + (CGGGG)n Simple_repeat Simple_repeat 5 61 0 266 298 42 115 chr17 44351554 44351596 -41086884 + MIR SINE MIR 61 105 -157 2265 53 17 10 chr17 44351596 44351895 -41086585 - AluSc SINE Alu -8 301 1 266 298 42 115 chr17 44351895 44352043 -41086437 + MIR SINE MIR 105 237 -25 221 353 38 30 chr17 44352561 44352694 -41085786 + L2 LINE L2 2928 3061 -211 374 280 49 42 chr17 44352939 44353152 -41085328 + MIR SINE MIR 9 222 -40 208 214 0 0 chr17 44353687 44353729 -41084751 + C-rich Low_complexity Low_complexity 1 42 0 313 234 0 65 chr17 44354657 44354764 -41083716 + G-rich Low_complexity Low_complexity 4 103 0 222 37 0 0 chr17 44355261 44355288 -41083192 + (T)n Simple_repeat Simple_repeat 1 27 0 23 54 0 0 chr17 44356775 44356812 -41081668 + AT_rich Low_complexity Low_complexity 1 37 0 1378 73 6 0 chr17 44358436 44358615 -41079865 - AluSp SINE Alu -4 309 130 35 63 0 0 chr17 44358838 44358901 -41079579 + GC_rich Low_complexity Low_complexity 1 63 0 679 279 87 29 chr17 44362295 44362503 -41075977 + MIR SINE MIR 28 247 -15 708 246 35 6 chr17 44363061 44363242 -41075238 + MIR SINE MIR 42 234 -28 207 294 120 33 chr17 44364379 44364471 -41074009 - MIR SINE MIR -63 145 46 399 315 115 6 chr17 44365032 44365197 -41073283 + MIR SINE MIR 60 242 -20 322 250 179 7 chr17 44366918 44367058 -41071422 + MIR SINE MIR 37 200 -62 878 157 72 0 chr17 44368577 44368743 -41069737 + FRAM SINE Alu 1 176 0 261 151 0 0 chr17 44369118 44369171 -41069309 + (TG)n Simple_repeat Simple_repeat 2 54 0 326 299 12 24 chr17 44369392 44369559 -41068921 + (TG)n Simple_repeat Simple_repeat 2 166 0 2195 120 7 0 chr17 44370927 44371236 -41067244 + AluSx SINE Alu 1 311 -1 654 312 122 16 chr17 44371666 44371977 -41066503 - L2 LINE L2 -2 3270 2927 525 213 213 5 chr17 44372123 44372325 -41066155 - L2 LINE L2 -252 3061 2818 555 268 42 35 chr17 44373002 44373224 -41065256 + MIR3 SINE MIR 3 250 -12 2366 132 18 30 chr17 44373565 44373701 -41064779 + L1MB7 LINE L1 5780 5916 -268 2048 108 21 3 chr17 44373701 44373987 -41064493 - AluSx SINE Alu -21 291 1 2366 132 18 30 chr17 44373987 44374244 -41064236 + L1MB7 LINE L1 5916 6168 -16 242 210 0 105 chr17 44375779 44375941 -41062539 + C-rich Low_complexity Low_complexity 1 145 0 237 33 0 0 chr17 44375958 44375988 -41062492 + (CCG)n Simple_repeat Simple_repeat 2 31 0 204 208 83 0 chr17 44376441 44376489 -41061991 - MIR3 SINE MIR -46 162 111 234 332 39 45 chr17 44376599 44376909 -41061571 + L2 LINE L2 2825 3132 -140 21 36 0 0 chr17 44382033 44382061 -41056419 + GC_rich Low_complexity Low_complexity 1 28 0 186 233 23 0 chr17 44382975 44383018 -41055462 - L2 LINE L2 -218 3054 3011 1700 146 7 7 chr17 44383374 44383678 -41054802 - AluJb SINE Alu 0 307 4 190 152 109 43 chr17 44383849 44383895 -41054585 + L2 LINE L2 3264 3312 -1 220 197 15 45 chr17 44384062 44384128 -41054352 + (TCCA)n Simple_repeat Simple_repeat 1 64 0 459 0 0 0 chr17 44384150 44384201 -41054279 + (CA)n Simple_repeat Simple_repeat 2 52 0 813 188 12 6 chr17 44385056 44385221 -41053259 + FRAM SINE Alu 1 166 -10 472 185 7 55 chr17 44385224 44385271 -41053209 + L1MC4a LINE L1 5287 5335 -1009 1929 158 3 0 chr17 44385271 44385575 -41052905 + AluJo SINE Alu 1 305 -7 472 185 7 55 chr17 44385575 44385673 -41052807 + L1MC4a LINE L1 5335 5425 -919 1349 186 7 65 chr17 44386158 44386305 -41052175 + AluJo SINE Alu 5 126 -186 2057 115 10 0 chr17 44386305 44386601 -41051879 + AluSx SINE Alu 2 300 -12 1349 186 7 65 chr17 44386601 44386760 -41051720 + AluJo SINE Alu 126 293 -19 292 313 12 0 chr17 44386983 44387066 -41051414 + L2 LINE L2 3188 3271 -1 198 0 0 0 chr17 44387974 44387996 -41050484 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2091 125 0 0 chr17 44387996 44388295 -41050185 - AluSx SINE Alu -13 299 1 622 266 107 13 chr17 44388965 44389198 -41049282 + MIR SINE MIR 8 262 0 1813 140 10 24 chr17 44389581 44389874 -41048606 + AluSx SINE Alu 13 301 -11 2432 71 3 0 chr17 44389875 44390185 -41048295 + AluY SINE Alu 1 311 0 492 338 39 13 chr17 44390265 44390496 -41047984 - MIR SINE MIR -7 255 19 185 250 0 0 chr17 44390537 44390577 -41047903 + L3b LINE CR1 1529 1568 -15 498 281 89 92 chr17 44390776 44390977 -41047503 + L1MC4a LINE L1 5618 5819 -1989 2111 102 31 0 chr17 44390977 44391270 -41047210 + AluSx SINE Alu 11 312 0 498 281 89 92 chr17 44391270 44391371 -41047109 + L1MC4a LINE L1 5819 5919 -1889 1118 45 0 0 chr17 44391389 44391521 -41046959 + AluY SINE Alu 1 132 -179 2043 129 0 0 chr17 44391705 44391992 -41046488 - AluSx SINE Alu -25 287 1 2178 117 0 0 chr17 44392663 44392970 -41045510 + AluSx SINE Alu 1 307 -5 1815 166 10 3 chr17 44393140 44393442 -41045038 + AluSx SINE Alu 1 304 -8 392 273 67 33 chr17 44393448 44393555 -41044925 - HAL1b LINE L1 -7 1341 1235 569 265 124 57 chr17 44393555 44393793 -41044687 - L1ME4a LINE L1 -161 5960 5739 2285 88 3 0 chr17 44393793 44394089 -41044391 - AluSp SINE Alu -16 297 1 1945 161 0 3 chr17 44394089 44394386 -41044094 - AluJo SINE Alu -15 297 1 569 265 124 57 chr17 44394386 44394444 -41044036 - L1ME4a LINE L1 -381 5740 1187 2233 92 3 0 chr17 44395170 44395463 -41043017 - AluSx SINE Alu -18 294 1 778 211 0 0 chr17 44395867 44396000 -41042480 - FLAM_C SINE Alu 0 133 1 462 283 108 48 chr17 44396242 44396557 -41041923 + L2 LINE L2 2921 3254 -18 261 262 156 34 chr17 44396697 44396934 -41041546 - L1MCa LINE L1 -3771 2655 2390 310 299 245 16 chr17 44396938 44397122 -41041358 - L1MCa LINE L1 -4040 2386 2161 2266 102 3 0 chr17 44397252 44397556 -41040924 + AluSx SINE Alu 1 305 -7 436 307 60 20 chr17 44398180 44398330 -41040150 + MIR SINE MIR 107 262 0 215 300 0 0 chr17 44398320 44398380 -41040100 + L2 LINE L2 3210 3269 -3 * 1883 145 47 0 chr17 44398732 44399028 -41039452 - AluJo SINE Alu -2 310 1 220 253 194 75 chr17 44399436 44399622 -41038858 - MIR SINE MIR -6 256 49 * 289 343 60 0 chr17 44399588 44399722 -41038758 + MIR3 SINE MIR 29 170 -38 456 167 67 2 chr17 44400303 44400464 -41038016 + MER3 DNA MER1_type 1 206 -3 296 323 108 13 chr17 44400494 44400652 -41037828 + MER5A DNA MER1_type 17 189 0 306 132 0 0 chr17 44401410 44401463 -41037017 + (TG)n Simple_repeat Simple_repeat 1 53 0 289 297 50 10 chr17 44402337 44402438 -41036042 + MIR SINE MIR 46 150 -58 204 194 0 0 chr17 44402583 44402619 -41035861 + (GGGTG)n Simple_repeat Simple_repeat 1 36 0 1824 132 20 14 chr17 44402693 44402988 -41035492 - AluJb SINE Alu -15 297 1 225 0 0 0 chr17 44403949 44403974 -41034506 + (CA)n Simple_repeat Simple_repeat 2 26 0 283 342 86 0 chr17 44405609 44405726 -41032754 - MIR SINE MIR -3 259 133 2145 123 0 0 chr17 44406596 44406896 -41031584 + AluSc SINE Alu 2 301 -8 318 318 38 52 chr17 44407600 44407811 -41030669 - MIR SINE MIR -1 261 54 1906 128 16 23 chr17 44409285 44409590 -41028890 - AluJo SINE Alu -3 309 7 1977 133 3 3 chr17 44409607 44409926 -41028554 - AluSx SINE Alu 0 312 1 200 262 16 16 chr17 44411011 44411072 -41027408 - MIR SINE MIR -189 73 13 553 162 40 0 chr17 44411544 44411643 -41026837 + MER46A DNA MER2_type 1 103 -133 1710 153 73 0 chr17 44412685 44412972 -41025508 - AluJb SINE Alu 0 312 5 839 152 0 14 chr17 44413033 44413178 -41025302 + FLAM_C SINE Alu 1 143 0 2322 82 0 7 chr17 44413326 44413632 -41024848 + AluSg1 SINE Alu 1 304 -5 1940 103 48 10 chr17 44413641 44413932 -41024548 + AluSc SINE Alu 1 302 -7 1158 137 11 0 chr17 44413978 44414153 -41024327 + AluJo SINE Alu 104 280 -32 246 330 52 0 chr17 44414168 44414283 -41024197 - L1MC4a LINE L1 -1888 5920 5800 2224 108 0 3 chr17 44414359 44414665 -41023815 + AluSx SINE Alu 1 305 -7 2384 79 0 3 chr17 44414665 44414970 -41023510 + AluSx SINE Alu 1 304 -8 270 259 102 9 chr17 44415178 44415286 -41023194 - L2 LINE L2 -21 3251 3134 2025 98 34 3 chr17 44415547 44415843 -41022637 + AluY SINE Alu 1 305 -6 2381 78 10 0 chr17 44415843 44416151 -41022329 + AluSp SINE Alu 1 311 -2 1830 124 60 3 chr17 44416308 44416590 -41021890 + AluJb SINE Alu 2 299 -13 639 276 54 9 chr17 44416632 44416853 -41021627 + MIR SINE MIR 31 261 -1 320 169 0 31 chr17 44416861 44416926 -41021554 - MIR3 SINE MIR -46 162 100 1896 211 107 11 chr17 44417106 44417628 -41020852 - MER119 DNA MER1_type -3 580 9 1314 32 0 0 chr17 44417961 44418115 -41020365 + L1PA4 LINE L1 6000 6153 -2 2343 81 3 7 chr17 44418142 44418449 -41020031 + AluSg SINE Alu 1 306 -4 2222 95 0 3 chr17 44418457 44418752 -41019728 + AluSx SINE Alu 1 294 -18 2240 106 0 6 chr17 44419209 44419521 -41018959 + AluSg SINE Alu 1 310 0 2096 86 0 83 chr17 44419753 44420089 -41018391 - AluSc SINE Alu -1 308 1 2432 55 0 13 chr17 44420100 44420412 -41018068 - AluY SINE Alu -1 310 3 2142 116 0 0 chr17 44422311 44422612 -41015868 - AluSx SINE Alu -11 301 1 1793 151 3 26 chr17 44422911 44423222 -41015258 - AluJo SINE Alu 0 312 9 2245 100 3 3 chr17 44423626 44423935 -41014545 + AluSx SINE Alu 3 311 -1 193 227 136 0 chr17 44424944 44425010 -41013470 + MIR SINE MIR 107 181 -81 4571 162 50 7 chr17 44425074 44425895 -41012585 - MER21B LTR ERV1 -7 856 1 1778 133 37 3 chr17 44425958 44426252 -41012228 + AluJo SINE Alu 1 304 -8 228 250 0 31 chr17 44426605 44426669 -41011811 + L1ME LINE L1 5836 5897 -267 841 170 0 15 chr17 44426718 44426853 -41011627 + FLAM_A SINE Alu 1 133 0 2344 108 0 0 chr17 44429532 44429827 -41008653 + AluSx SINE Alu 1 295 -17 202 150 0 25 chr17 44431411 44431451 -41007029 + MIR SINE MIR 110 148 -60 180 0 0 0 chr17 44431688 44431708 -41006772 + (CAGGG)n Simple_repeat Simple_repeat 4 23 0 288 313 12 0 chr17 44432512 44432595 -41005885 - L2 LINE L2 -1 3271 3188 1484 185 7 68 chr17 44432818 44432979 -41005501 - AluJo SINE Alu -19 293 158 2187 112 10 0 chr17 44432979 44433273 -41005207 - AluSx SINE Alu -14 298 2 1484 185 7 68 chr17 44433273 44433419 -41005061 - AluJo SINE Alu -154 158 5 2411 82 3 13 chr17 44434334 44434640 -41003840 - AluSc SINE Alu -6 303 1 418 235 10 20 chr17 44435373 44435475 -41003005 + MIR SINE MIR 38 138 -70 687 156 16 23 chr17 44436886 44437014 -41001466 - FLAM_A SINE Alu -6 127 1 372 94 0 0 chr17 44437564 44437617 -41000863 + (CTA)n Simple_repeat Simple_repeat 3 55 0 234 81 0 0 chr17 44437619 44437656 -41000824 + (CAA)n Simple_repeat Simple_repeat 2 38 0 523 282 58 0 chr17 44437674 44437848 -41000632 - MIR SINE MIR -32 230 47 212 286 57 0 chr17 44437900 44437970 -41000510 + MIR SINE MIR 76 149 -113 21 57 0 0 chr17 44438009 44438044 -41000436 + AT_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 44440937 44440966 -40997514 + GC_rich Low_complexity Low_complexity 1 29 0 213 262 119 12 chr17 44441903 44441987 -40996493 - L2 LINE L2 -20 3252 3160 1405 170 93 11 chr17 44442318 44442588 -40995892 + AluJo SINE Alu 1 292 -20 232 315 0 0 chr17 44442713 44442767 -40995713 + L3 LINE CR1 1414 1467 -110 244 268 21 82 chr17 44442879 44442976 -40995504 + Charlie8 DNA MER1_type 1 91 -2326 239 170 21 0 chr17 44443036 44443083 -40995397 + Charlie8 DNA MER1_type 2370 2417 0 228 313 0 12 chr17 44443084 44443164 -40995316 + MIR SINE MIR 21 99 -163 1082 160 22 53 chr17 44444127 44444193 -40994287 - MER20 DNA MER1_type 0 219 152 1870 139 46 52 chr17 44444193 44444517 -40993963 - THE1B LTR MaLR 0 364 41 2143 131 27 0 chr17 44444517 44444815 -40993665 - AluSx SINE Alu -6 306 1 1870 139 46 52 chr17 44444815 44444856 -40993624 - THE1B LTR MaLR -323 41 1 1082 160 22 53 chr17 44444856 44445014 -40993466 - MER20 DNA MER1_type -67 152 2 543 215 71 9 chr17 44445022 44445184 -40993296 - MIR SINE MIR -62 146 4 647 237 58 0 chr17 44445697 44445836 -40992644 - MER63 DNA MER1_type -63 773 1 183 254 32 0 chr17 44446596 44446659 -40991821 - L2 LINE L2 -49 3264 3200 627 232 237 80 chr17 44446731 44446777 -40991703 - LTR33A LTR ERVL -2 521 484 742 138 0 36 chr17 44446777 44446915 -40991565 - FLAM_C SINE Alu 0 133 1 627 232 237 80 chr17 44446915 44446931 -40991549 - LTR33A LTR ERVL -39 484 472 2426 96 0 6 chr17 44446931 44447243 -40991237 - AluSx SINE Alu -2 310 1 627 232 237 80 chr17 44447243 44447627 -40990853 - LTR33A LTR ERVL -51 472 4 302 215 0 0 chr17 44447732 44447797 -40990683 + L2 LINE L2 3249 3313 0 201 270 90 10 chr17 44447796 44447896 -40990584 - L2 LINE L2 -1106 2208 2101 * 1779 91 5 0 chr17 44447899 44448120 -40990360 + AluSq SINE Alu 1 222 -91 245 317 33 61 chr17 44448211 44448391 -40990089 + L2 LINE L2 2201 2375 -939 262 304 59 37 chr17 44448593 44448728 -40989752 + L2 LINE L2 2720 2857 -457 2403 101 0 3 chr17 44449046 44449353 -40989127 + AluSx SINE Alu 1 306 -6 2424 97 3 0 chr17 44449587 44449897 -40988583 + AluSx SINE Alu 1 311 -1 581 258 131 74 chr17 44449922 44450379 -40988101 + MLT1J LTR MaLR 29 511 0 2438 68 0 10 chr17 44450480 44450773 -40987707 + AluSc SINE Alu 1 290 -19 286 299 86 0 chr17 44451161 44451278 -40987202 - MER113 DNA MER1_type? -4 517 391 2367 112 0 0 chr17 44451379 44451691 -40986789 - AluSx SINE Alu 0 312 1 701 78 0 0 chr17 44451715 44451805 -40986675 - 5S rRNA rRNA -31 90 1 510 273 126 31 chr17 44451806 44452132 -40986348 - L1MC4a LINE L1 -1785 6023 5667 538 239 15 15 chr17 44452138 44452268 -40986212 - L2 LINE L2 0 3313 3184 1040 187 43 148 chr17 44452302 44452358 -40986122 - MER113 DNA MER1_type? -125 396 336 2434 81 0 10 chr17 44452358 44452666 -40985814 - AluSx SINE Alu -2 310 6 1040 187 43 148 chr17 44452666 44452914 -40985566 - MER113 DNA MER1_type? -185 336 149 2181 136 0 3 chr17 44452914 44453224 -40985256 - AluJo SINE Alu -3 309 1 1040 187 43 148 chr17 44453224 44453357 -40985123 - MER113 DNA MER1_type? -372 149 4 2327 98 3 0 chr17 44453577 44453873 -40984607 - AluSg SINE Alu -12 298 2 2290 101 0 3 chr17 44454582 44454879 -40983601 - AluSg SINE Alu -14 296 1 1806 176 112 27 chr17 44454908 44454990 -40983490 - Charlie1b DNA MER1_type -2238 523 449 783 172 48 137 chr17 44454990 44455108 -40983372 + MER63A DNA MER1_type 4 94 -1594 1428 88 292 12 chr17 44455108 44455348 -40983132 - AluSg1 SINE Alu -2 307 1 783 172 48 137 chr17 44455348 44455456 -40983024 + MER63A DNA MER1_type 94 210 0 1806 176 112 27 chr17 44455456 44455855 -40982625 - Charlie1b DNA MER1_type -2312 449 1 489 221 79 8 chr17 44455855 44455982 -40982498 - MIR SINE MIR -64 198 63 927 152 0 0 chr17 44455982 44456114 -40982366 + FLAM_C SINE Alu 1 132 -11 2090 135 34 0 chr17 44456140 44456437 -40982043 + AluSx SINE Alu 1 307 -5 183 188 0 0 chr17 44456437 44456469 -40982011 - MIR SINE MIR -190 72 41 234 224 45 15 chr17 44456495 44456562 -40981918 + MIR SINE MIR 67 135 -127 211 364 68 15 chr17 44456707 44456839 -40981641 + L2 LINE L2 3175 3313 0 444 313 38 6 chr17 44458364 44458524 -40979956 + L2 LINE L2 3107 3271 -1 373 239 106 0 chr17 44458717 44458830 -40979650 - L2 LINE L2 0 3272 3148 1773 226 32 3 chr17 44458952 44459332 -40979148 - LTR16A LTR ERVL -1 449 59 2176 136 0 3 chr17 44459564 44459873 -40978607 - AluJo SINE Alu -4 308 1 255 269 60 45 chr17 44459995 44460129 -40978351 + L2 LINE L2 2482 2617 -697 560 237 160 21 chr17 44460357 44460551 -40977929 + MIR SINE MIR 8 228 -34 315 132 0 19 chr17 44460671 44460724 -40977756 - L2 LINE L2 0 3313 3262 224 297 9 36 chr17 44461159 44461270 -40977210 + GA-rich Low_complexity Low_complexity 1 108 0 524 288 56 0 chr17 44461288 44461448 -40977032 - MIR SINE MIR -59 203 35 384 22 0 0 chr17 44461524 44461569 -40976911 + (TG)n Simple_repeat Simple_repeat 2 46 0 2257 91 3 11 chr17 44461635 44461945 -40976535 + AluSx SINE Alu 1 308 0 901 110 0 0 chr17 44461954 44462072 -40976408 - FRAM SINE Alu -37 139 22 214 312 138 9 chr17 44462270 44462379 -40976101 + MIR SINE MIR 66 188 -74 201 152 22 65 chr17 44462547 44462593 -40975887 - MIR SINE MIR -57 151 108 710 182 53 81 chr17 44463141 44463311 -40975169 + ORSL DNA AcHobo 36 198 -77 1735 157 7 7 chr17 44463311 44463585 -40974895 + AluJo SINE Alu 18 291 -21 710 182 53 81 chr17 44463585 44463661 -40974819 + ORSL DNA AcHobo 198 275 0 252 254 16 0 chr17 44463767 44463830 -40974650 + MIR SINE MIR 102 165 -97 1939 134 3 11 chr17 44463834 44464149 -40974331 - AluSx SINE Alu 0 313 1 401 224 29 46 chr17 44464436 44464591 -40973889 - MIR SINE MIR -62 146 45 2082 120 3 13 chr17 44464975 44465274 -40973206 - AluSx SINE Alu -5 307 12 1904 140 0 21 chr17 44465286 44465598 -40972882 - AluJo SINE Alu 0 308 3 233 292 125 21 chr17 44466431 44466527 -40971953 + L2 LINE L2 3199 3304 -9 262 324 40 27 chr17 44466638 44466786 -40971694 + MIR SINE MIR 95 244 -18 419 194 0 0 chr17 44467096 44467163 -40971317 - AluJ/FLAM SINE Alu -244 68 2 278 273 109 39 chr17 44467223 44467351 -40971129 + MIR3 SINE MIR 1 137 -71 806 230 55 14 chr17 44467522 44467739 -40970741 + MIR SINE MIR 5 230 -32 759 244 11 0 chr17 44467897 44468073 -40970407 - MIR SINE MIR -6 256 79 2128 108 0 4 chr17 44468154 44468459 -40970021 - AluSg SINE Alu 0 307 4 285 164 18 0 chr17 44468480 44468535 -40969945 - MER5B DNA MER1_type -3 175 120 1031 154 0 55 chr17 44468535 44468717 -40969763 + AluJo SINE Alu 87 258 -54 329 219 0 14 chr17 44468719 44468792 -40969688 - MER5B DNA MER1_type -61 117 46 2605 59 0 3 chr17 44468805 44469108 -40969372 + AluY SINE Alu 1 302 -9 243 0 0 0 chr17 44469138 44469165 -40969315 + (CA)n Simple_repeat Simple_repeat 1 27 0 205 208 21 0 chr17 44469171 44469219 -40969261 - MER5B DNA MER1_type -129 49 1 848 133 0 15 chr17 44469427 44469562 -40968918 - FLAM_C SINE Alu 0 133 1 286 252 130 35 chr17 44469639 44469754 -40968726 + MIR SINE MIR 19 144 -64 374 229 21 10 chr17 44471061 44471157 -40967323 + MER96B DNA MER1_type? 321 417 0 339 258 73 0 chr17 44471338 44471462 -40967018 - MER103 DNA DNA -2 164 32 257 277 32 77 chr17 44471536 44471575 -40966905 + MER5A DNA MER1_type 36 75 -114 2129 117 69 0 chr17 44471575 44471865 -40966615 + AluSx SINE Alu 1 310 -2 257 277 32 77 chr17 44471865 44471980 -40966500 + MER5A DNA MER1_type 75 183 -6 466 148 99 10 chr17 44472075 44472176 -40966304 + L1MB8 LINE L1 3620 3729 -2417 6222 140 21 17 chr17 44472226 44472499 -40965981 + L1PB2 LINE L1 4121 4391 -1760 198 0 0 0 chr17 44472499 44472521 -40965959 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 6222 140 21 17 chr17 44472521 44474176 -40964304 + L1PB2 LINE L1 4391 6057 -94 207 339 0 0 chr17 44474176 44474344 -40964136 + (CACTA)n Simple_repeat Simple_repeat 4 171 0 481 159 97 18 chr17 44474364 44474477 -40964003 + L1PB3 LINE L1 6027 6148 -6 36 23 0 0 chr17 44474498 44474541 -40963939 + AT_rich Low_complexity Low_complexity 1 43 0 6811 188 44 11 chr17 44474541 44476853 -40961627 + L1MB8 LINE L1 3739 6125 -53 994 201 5 11 chr17 44476856 44477040 -40961440 - AluJb SINE Alu -1 311 129 2404 85 0 0 chr17 44477047 44477340 -40961140 - AluSx SINE Alu -19 293 1 408 87 0 14 chr17 44477340 44477409 -40961071 + L1MB8 LINE L1 6111 6178 0 609 280 50 28 chr17 44477787 44478005 -40960475 - MLT1J LTR MaLR -2 509 287 1978 100 27 0 chr17 44478029 44478149 -40960331 + AluSg SINE Alu 1 116 -194 243 0 0 0 chr17 44478149 44478176 -40960304 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1978 100 27 0 chr17 44478176 44478314 -40960166 + AluSg SINE Alu 116 266 -44 189 0 0 0 chr17 44478315 44478336 -40960144 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 370 269 117 48 chr17 44478362 44478455 -40960025 - L2 LINE L2 -1549 1765 1680 2083 107 6 63 chr17 44478455 44478773 -40959707 - AluSx SINE Alu -12 300 1 370 269 117 48 chr17 44478773 44478969 -40959511 - L2 LINE L2 -1634 1680 1456 411 148 0 0 chr17 44479018 44479106 -40959374 + (CCTG)n Simple_repeat Simple_repeat 2 89 0 779 261 12 45 chr17 44479116 44479361 -40959119 - L2 LINE L2 0 3313 3077 * 1178 292 70 52 chr17 44479350 44479795 -40958685 - L2 LINE L2 -2307 1007 541 2105 122 6 16 chr17 44479795 44480107 -40958373 - AluSx SINE Alu -3 309 1 1178 292 70 52 chr17 44480107 44480417 -40958063 - L2 LINE L2 -2773 541 238 2472 65 0 46 chr17 44480549 44480874 -40957606 - AluSg SINE Alu 0 310 1 287 276 32 8 chr17 44480949 44481072 -40957408 - L1MC4 LINE L1 -1 8041 7916 540 178 0 0 chr17 44481083 44481190 -40957290 + (TCCA)n Simple_repeat Simple_repeat 2 108 0 273 247 0 0 chr17 44481203 44481276 -40957204 - L1MC4 LINE L1 -141 7901 7829 3214 193 60 71 chr17 44481307 44481449 -40957031 - L1ME2 LINE L1 0 6164 6022 2030 94 4 0 chr17 44481449 44481703 -40956777 + AluSp SINE Alu 47 301 -12 3214 193 60 71 chr17 44481703 44482782 -40955698 - L1ME2 LINE L1 -142 6022 4933 2002 137 28 0 chr17 44482782 44483067 -40955413 + AluJb SINE Alu 1 293 -19 3214 193 60 71 chr17 44483067 44483282 -40955198 - L1ME2 LINE L1 -1231 4933 4717 1818 185 10 0 chr17 44483282 44483579 -40954901 + AluJo SINE Alu 1 300 -12 3214 193 60 71 chr17 44483579 44483699 -40954781 - L1ME2 LINE L1 -1447 4717 4597 1501 73 0 0 chr17 44483699 44483903 -40954577 - L1PA3 LINE L1 0 6155 5952 3214 193 60 71 chr17 44483903 44484155 -40954325 - L1ME2 LINE L1 -1567 4597 4377 2688 43 0 0 chr17 44484172 44484475 -40954005 + AluY SINE Alu 1 303 -8 939 154 0 0 chr17 44484475 44484605 -40953875 - AluJo/FLAM SINE Alu -181 131 2 2048 94 50 27 chr17 44484610 44484909 -40953571 - AluSq SINE Alu -7 306 1 2068 141 0 3 chr17 44485465 44485763 -40952717 + AluSx SINE Alu 1 297 -15 822 273 150 15 chr17 44486174 44486507 -40951973 - MLT1J2 LTR MaLR -8 442 65 2167 115 33 36 chr17 44487257 44487622 -40950858 + THE1B LTR MaLR 1 364 0 649 271 23 41 chr17 44487622 44487840 -40950640 - MIR SINE MIR -21 241 28 503 299 46 72 chr17 44487933 44488281 -40950199 + MLT1I LTR MaLR 71 409 0 2325 104 3 16 chr17 44488422 44488738 -40949742 + AluSx SINE Alu 1 312 0 2408 98 16 0 chr17 44489507 44489814 -40948666 + AluSx SINE Alu 1 312 0 207 0 0 0 chr17 44489821 44489844 -40948636 + (GAAA)n Simple_repeat Simple_repeat 1 23 0 700 11 0 0 chr17 44489847 44489935 -40948545 + L1PA3 LINE L1 6068 6155 0 1261 58 17 0 chr17 44489941 44490115 -40948365 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 405 313 44 6 chr17 44490221 44490381 -40948099 - MLT1K LTR MaLR -401 187 22 378 346 51 42 chr17 44490401 44490638 -40947842 - L2 LINE L2 -119 3153 2915 306 263 64 11 chr17 44491319 44491460 -40947020 + MIR SINE MIR 38 188 -69 278 274 62 7 chr17 44492083 44492229 -40946251 - Charlie7 DNA MER1_type -29 2583 2430 230 192 0 0 chr17 44492291 44492343 -40946137 + L1MB8 LINE L1 5279 5330 -816 1983 146 0 0 chr17 44492348 44492623 -40945857 + AluSx SINE Alu 3 277 -35 2827 196 73 52 chr17 44492657 44492730 -40945750 + L1MB8 LINE L1 5317 5387 -791 1827 151 7 17 chr17 44492730 44493022 -40945458 + AluJo SINE Alu 12 300 -12 2827 196 73 52 chr17 44493022 44493438 -40945042 + L1MB8 LINE L1 5387 5834 -344 2284 123 0 0 chr17 44493438 44493748 -40944732 + AluSx SINE Alu 1 310 -2 2827 196 73 52 chr17 44493748 44494101 -40944379 + L1MB8 LINE L1 5834 6178 0 245 229 9 95 chr17 44494084 44494147 -40944333 + L1MC/D LINE L1 5802 5854 -1954 * 2213 120 0 10 chr17 44494147 44494448 -40944032 - AluSx SINE Alu -14 298 1 245 229 9 95 chr17 44494448 44494489 -40943991 + L1MC/D LINE L1 5854 5897 -1911 1288 94 11 0 chr17 44494522 44494702 -40943778 - AluSq SINE Alu 0 313 132 2358 89 6 10 chr17 44494702 44495015 -40943465 - AluSx SINE Alu 0 312 1 2488 152 55 4 chr17 44495228 44495715 -40942765 - L1MB3 LINE L1 0 6183 5672 613 170 0 28 chr17 44495724 44495865 -40942615 - FLAM_C SINE Alu -5 138 2 644 246 120 69 chr17 44496390 44496707 -40941773 + MER46C DNA MER2_type 6 338 0 204 204 82 0 chr17 44496707 44496756 -40941724 - MIR SINE MIR -111 151 99 561 285 21 0 chr17 44496991 44497135 -40941345 + MIR SINE MIR 13 159 -103 2507 89 0 0 chr17 44497138 44497442 -40941038 + AluSx SINE Alu 1 304 -8 284 303 106 7 chr17 44497681 44497823 -40940657 - MIR3 SINE MIR -23 185 30 2325 111 10 0 chr17 44498602 44498908 -40939572 + AluSx SINE Alu 1 309 -3 233 73 0 24 chr17 44499134 44499175 -40939305 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2158 130 13 0 chr17 44499178 44499486 -40938994 - AluSx SINE Alu 0 312 1 1932 152 0 26 chr17 44499488 44499790 -40938690 - AluJo SINE Alu -16 296 3 648 227 0 8 chr17 44499847 44499979 -40938501 + L2 LINE L2 3183 3313 0 226 127 0 55 chr17 44500460 44500515 -40937965 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 1897 147 3 32 chr17 44501222 44501393 -40937087 - AluJo SINE Alu -8 304 145 2256 103 0 3 chr17 44501393 44501683 -40936797 - AluSc SINE Alu -20 289 1 1897 147 3 32 chr17 44501683 44501824 -40936656 - AluJo SINE Alu -167 145 1 532 301 192 8 chr17 44501881 44502402 -40936078 + L2 LINE L2 593 1209 -2105 297 326 68 42 chr17 44502697 44502961 -40935519 + L2 LINE L2 2692 2962 -352 194 302 19 0 chr17 44503081 44503134 -40935346 + L2 LINE L2 3255 3308 -5 341 298 30 53 chr17 44503432 44503563 -40934917 - L2 LINE L2 -4 3309 3182 184 32 0 32 chr17 44503582 44503613 -40934867 + L2 LINE L2 3022 3051 -221 2117 133 3 0 chr17 44504124 44504417 -40934063 + AluSx SINE Alu 2 295 -17 196 226 194 16 chr17 44504942 44505066 -40933414 - L2 LINE L2 -238 3034 2889 379 265 60 34 chr17 44505167 44505284 -40933196 - MIR SINE MIR -123 139 20 2257 112 0 10 chr17 44505469 44505781 -40932699 - AluSq SINE Alu -3 310 2 1626 125 3 96 chr17 44505873 44506186 -40932294 + AluJb SINE Alu 8 291 -21 2117 221 118 16 chr17 44506314 44506973 -40931507 - L1ME3 LINE L1 -148 6014 5274 2039 128 52 0 chr17 44506973 44507262 -40931218 - AluSx SINE Alu -8 304 1 2117 221 118 16 chr17 44507262 44507328 -40931152 - L1ME3 LINE L1 -888 5274 5216 693 256 89 67 chr17 44507328 44507719 -40930761 + MER113 DNA MER1_type? 120 519 -2 2606 66 0 0 chr17 44507994 44508298 -40930182 - AluY SINE Alu -7 304 1 357 24 0 0 chr17 44508437 44508479 -40930001 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 278 240 31 116 chr17 44508479 44508608 -40929872 - L2 LINE L2 -37 3276 3159 1713 248 55 22 chr17 44510252 44510797 -40927683 + L1MD2 LINE L1 5795 6357 -2 336 280 157 5 chr17 44511402 44511588 -40926892 - MIR SINE MIR -36 226 14 2456 64 10 0 chr17 44511611 44511906 -40926574 - AluY SINE Alu -13 298 1 376 321 166 27 chr17 44511908 44512275 -40926205 - L2 LINE L2 -24 3289 2872 616 298 75 22 chr17 44512314 44512542 -40925938 - MIR SINE MIR -21 241 2 641 328 179 19 chr17 44512556 44513550 -40924930 - L2 LINE L2 -516 2798 1646 785 265 129 38 chr17 44513570 44513966 -40924514 + LTR16A LTR ERVL 19 450 0 510 249 76 0 chr17 44514213 44514374 -40924106 + L1MB7 LINE L1 5491 5665 -456 1533 193 71 28 chr17 44514388 44514741 -40923739 + MLT1A2 LTR MaLR 5 372 -2 1012 129 0 116 chr17 44514743 44514819 -40923661 + L1MB7 LINE L1 5667 5750 -434 2217 109 0 35 chr17 44514819 44515131 -40923349 + AluSg1 SINE Alu 1 301 -8 1012 129 0 116 chr17 44515131 44515228 -40923252 + L1MB7 LINE L1 5750 5812 -372 1843 171 14 0 chr17 44515228 44515541 -40922939 + AluJb SINE Alu 1 317 0 1012 129 0 116 chr17 44515541 44515590 -40922890 + L1MB7 LINE L1 5812 5865 -319 1956 161 43 0 chr17 44516335 44516634 -40921846 + AluJb SINE Alu 1 312 0 198 341 148 15 chr17 44517106 44517241 -40921239 + MIR3 SINE MIR 53 205 -3 360 249 101 43 chr17 44517372 44517626 -40920854 + L2 LINE L2 2776 3044 -228 1724 225 54 9 chr17 44517821 44518343 -40920137 + MER115 DNA AcHobo 93 693 0 185 351 156 0 chr17 44518450 44518527 -40919953 + MIR SINE MIR 174 262 0 293 268 42 0 chr17 44518981 44519052 -40919428 + MIR SINE MIR 77 150 -58 666 309 95 24 chr17 44521644 44521981 -40916499 - L3 LINE CR1 -462 1115 755 368 304 10 0 chr17 44522528 44522630 -40915850 - MIR SINE MIR -96 166 64 2350 89 0 0 chr17 44522761 44523064 -40915416 + AluSg SINE Alu 1 303 -7 2095 100 0 0 chr17 44523618 44523932 -40914548 + AluY SINE Alu 1 314 0 1439 223 17 3 chr17 44524192 44524493 -40913987 + AluJo SINE Alu 1 305 -7 1946 137 0 0 chr17 44524940 44525218 -40913262 + AluSx SINE Alu 1 278 -34 189 159 0 0 chr17 44525219 44525263 -40913217 + (TAA)n Simple_repeat Simple_repeat 3 46 0 345 172 70 134 chr17 44525282 44525367 -40913113 - MER117 DNA MER1_type -50 147 75 1886 168 10 0 chr17 44525367 44525676 -40912804 + AluJo SINE Alu 1 312 0 345 172 70 134 chr17 44525676 44525747 -40912733 - MER117 DNA MER1_type -122 75 1 353 271 213 0 chr17 44526841 44526963 -40911517 - L3 LINE CR1 -546 1031 884 2061 129 30 0 chr17 44527585 44527887 -40910593 + AluSx SINE Alu 1 311 -1 452 305 123 21 chr17 44528099 44528286 -40910194 + MIR SINE MIR 13 218 -44 339 231 0 51 chr17 44530426 44530543 -40907937 + L1ME4a LINE L1 5981 6091 -30 256 303 60 4 chr17 44530650 44530797 -40907683 + MIR SINE MIR 75 229 -33 22 35 0 0 chr17 44530819 44530848 -40907632 + AT_rich Low_complexity Low_complexity 1 29 0 720 115 0 0 chr17 44530968 44531064 -40907416 - AluSg/x SINE Alu -19 290 195 240 276 83 60 chr17 44531465 44531682 -40906798 + L2 LINE L2 2838 3059 -213 2339 93 3 0 chr17 44531810 44532121 -40906359 - AluSx SINE Alu 0 312 1 262 274 65 16 chr17 44532195 44532319 -40906161 + L1ME4a LINE L1 5980 6109 -12 503 309 114 21 chr17 44532517 44532753 -40905727 - L2 LINE L2 0 3313 3056 359 346 48 48 chr17 44532906 44533302 -40905178 + L2 LINE L2 2864 3259 -13 437 278 144 6 chr17 44533781 44533954 -40904526 + L3 LINE CR1 1370 1566 -11 239 0 0 31 chr17 44536103 44536135 -40902345 + (CA)n Simple_repeat Simple_repeat 1 31 0 320 282 38 23 chr17 44537125 44537256 -40901224 - MER5B DNA MER1_type -43 135 3 2160 108 3 0 chr17 44537275 44537572 -40900908 - AluSx SINE Alu 0 312 15 278 355 71 6 chr17 44537685 44537854 -40900626 + MIR SINE MIR 13 192 -70 2322 97 0 0 chr17 44538131 44538430 -40900050 + AluSx SINE Alu 1 299 -13 1186 132 0 52 chr17 44538750 44538962 -40899518 - AluJo SINE Alu -17 295 95 1340 82 5 11 chr17 44539462 44539646 -40898834 + AluSp SINE Alu 118 300 -13 2061 132 0 0 chr17 44539654 44539949 -40898531 + AluSx SINE Alu 1 295 -17 1975 121 46 0 chr17 44539959 44540240 -40898240 + AluSx SINE Alu 3 296 -16 2129 71 60 3 chr17 44540244 44540527 -40897953 + AluY SINE Alu 1 299 -12 820 201 0 0 chr17 44540579 44540718 -40897762 - FLAM_C SINE Alu -4 139 1 198 71 0 0 chr17 44540738 44540766 -40897714 + (A)n Simple_repeat Simple_repeat 1 28 0 1044 122 0 0 chr17 44540816 44540963 -40897517 + AluJb SINE Alu 156 302 -10 1026 274 123 38 chr17 44541616 44542744 -40895736 + L1MCa LINE L1 1843 5672 -754 2458 50 10 0 chr17 44543123 44543422 -40895058 + AluY SINE Alu 1 302 -9 2019 136 3 10 chr17 44543650 44543960 -40894520 + AluJb SINE Alu 3 310 -2 384 338 50 35 chr17 44544129 44544327 -40894153 + L1MDa LINE L1 2406 2606 -3934 2062 139 0 19 chr17 44544335 44544652 -40893828 + AluSx SINE Alu 1 311 -1 1057 161 0 60 chr17 44544664 44544881 -40893599 + AluJb SINE Alu 92 295 -17 761 317 91 63 chr17 44544890 44545350 -40893130 + L1M4 LINE L1 983 1429 -2812 2091 90 47 10 chr17 44545350 44545651 -40892829 + AluSx SINE Alu 1 312 0 761 317 91 63 chr17 44545651 44545861 -40892619 + L1M4 LINE L1 1429 2907 -1334 189 0 0 0 chr17 44546037 44546058 -40892422 + (CATAT)n Simple_repeat Simple_repeat 1 21 0 313 311 114 0 chr17 44546059 44546226 -40892254 + L2 LINE L2 3123 3308 -5 1643 72 9 22 chr17 44547049 44547272 -40891208 + L1PB1 LINE L1 5928 6147 -4 308 258 21 10 chr17 44548600 44548697 -40889783 + MIR SINE MIR 30 127 -81 272 295 172 0 chr17 44548752 44548874 -40889606 + L2 LINE L2 3108 3250 -22 196 289 33 33 chr17 44550098 44550188 -40888292 - MIR SINE MIR -89 173 84 188 322 126 7 chr17 44550499 44550642 -40887838 - L2 LINE L2 -10 3262 3103 245 256 56 40 chr17 44551110 44551235 -40887245 - MIR3 SINE MIR -15 193 67 1234 245 79 16 chr17 44551587 44551905 -40886575 - MER46C DNA MER2_type 0 338 1 22 35 0 0 chr17 44552268 44552297 -40886183 + GC_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr17 44552400 44552436 -40886044 + GC_rich Low_complexity Low_complexity 1 36 0 287 212 321 0 chr17 44552807 44552940 -40885540 + MIR3 SINE MIR 27 196 -12 222 254 0 0 chr17 44554426 44554481 -40883999 + C-rich Low_complexity Low_complexity 1 55 0 249 269 10 29 chr17 44555088 44555192 -40883288 + C-rich Low_complexity Low_complexity 5 106 0 2198 72 0 63 chr17 44556280 44556611 -40881869 + AluY SINE Alu 2 311 0 438 277 109 27 chr17 44556710 44556894 -40881586 + MIR SINE MIR 34 232 -30 2100 105 7 0 chr17 44556908 44557194 -40881286 - AluSx SINE Alu -22 290 3 989 113 7 0 chr17 44557299 44557440 -40881040 + AluSg/x SINE Alu 162 303 -9 375 311 68 21 chr17 44560489 44560679 -40877801 + MER112 DNA MER1_type 13 211 -49 2302 81 3 0 chr17 44560704 44561000 -40877480 + AluY SINE Alu 1 297 -14 2191 110 13 0 chr17 44561001 44561309 -40877171 - AluSx SINE Alu 0 312 1 468 264 187 33 chr17 44562814 44562996 -40875484 + MIR SINE MIR 40 249 -13 962 227 49 0 chr17 44563029 44563232 -40875248 - MIR SINE MIR -36 226 14 197 293 142 28 chr17 44563265 44563371 -40875109 - L2 LINE L2 -21 3292 3175 189 228 53 35 chr17 44564204 44564261 -40874219 + MIR SINE MIR 91 148 -60 263 357 89 25 chr17 44564692 44564844 -40873636 + L2 LINE L2 2524 2665 -649 2174 113 3 0 chr17 44564844 44565153 -40873327 - AluSx SINE Alu -2 310 1 263 357 89 25 chr17 44565153 44565280 -40873200 + L2 LINE L2 2665 2821 -493 261 209 30 45 chr17 44565628 44565695 -40872785 + L2 LINE L2 3014 3079 -193 266 279 59 0 chr17 44565800 44565868 -40872612 - MIR SINE MIR -63 145 74 366 270 126 18 chr17 44567027 44567249 -40871231 + L2 LINE L2 2811 3056 -216 191 417 37 5 chr17 44567359 44567577 -40870903 + L2 LINE L2 3048 3272 0 280 298 0 0 chr17 44567695 44567883 -40870597 + (TG)n Simple_repeat Simple_repeat 1 188 0 589 268 8 0 chr17 44568209 44568336 -40870144 - MIR SINE MIR -62 146 19 187 275 0 0 chr17 44568719 44568759 -40869721 - L2 LINE L2 -23 3290 3251 229 286 0 18 chr17 44568813 44568869 -40869611 - MIR SINE MIR -62 146 92 394 248 120 14 chr17 44569045 44569212 -40869268 - L1 LINE L1 -1697 4449 4280 535 257 53 13 chr17 44569212 44569383 -40869097 + MIR SINE MIR 1 174 -62 254 317 10 40 chr17 44569465 44569566 -40868914 + MIR SINE MIR 164 261 -1 2268 96 7 7 chr17 44570240 44570542 -40867938 - AluSp SINE Alu -11 302 1 391 192 154 19 chr17 44571125 44571229 -40867251 - MIR SINE MIR -80 182 65 359 305 95 17 chr17 44571241 44571536 -40866944 + L1ME4a LINE L1 5793 6110 -11 368 275 7 0 chr17 44571676 44571825 -40866655 + (CCCA)n Simple_repeat Simple_repeat 1 150 0 292 259 102 9 chr17 44572256 44572364 -40866116 + L2 LINE L2 3134 3251 -21 2364 90 10 0 chr17 44572572 44572873 -40865607 - AluSx SINE Alu -8 304 1 469 83 0 0 chr17 44572877 44572937 -40865543 - AluSg/x SINE Alu -180 130 71 1361 162 0 5 chr17 44572941 44573145 -40865335 - AluSx SINE Alu -109 203 1 875 98 0 0 chr17 44573149 44573261 -40865219 - AluSq/x SINE Alu -180 132 21 261 170 0 0 chr17 44573261 44573308 -40865172 - L1M3 LINE L1 -421 5762 5716 390 235 134 17 chr17 44574489 44574608 -40863872 + MER5B DNA MER1_type 46 178 0 289 232 110 12 chr17 44574893 44574975 -40863505 - L2 LINE L2 -216 3056 2967 246 221 104 0 chr17 44575184 44575261 -40863219 + Charlie8 DNA MER1_type 61 145 -2272 255 322 0 43 chr17 44575516 44575631 -40862849 - MIR SINE MIR -96 166 57 266 306 93 9 chr17 44575687 44575795 -40862685 + MIR SINE MIR 20 136 -126 970 102 0 0 chr17 44575829 44575956 -40862524 - AluSg/x SINE Alu -10 300 174 250 311 60 33 chr17 44576019 44576170 -40862310 + L3b LINE CR1 1284 1438 -145 1567 122 148 0 chr17 44576215 44576478 -40862002 - AluSx SINE Alu -10 302 1 1776 136 26 45 chr17 44578558 44578867 -40859613 + AluSx SINE Alu 1 303 -9 307 300 55 35 chr17 44579604 44579817 -40858663 + L1MC5 LINE L1 7505 7725 -236 2546 47 3 28 chr17 44579817 44580136 -40858344 - AluY SINE Alu 0 311 1 307 300 55 35 chr17 44580136 44580179 -40858301 + L1MC5 LINE L1 7725 7766 -195 200 244 0 0 chr17 44580223 44580264 -40858216 + T-rich Low_complexity Low_complexity 1 41 0 1408 110 0 5 chr17 44580328 44580519 -40857961 - AluSg/x SINE Alu -9 300 111 2419 80 0 3 chr17 44580745 44581046 -40857434 - AluSq SINE Alu -13 300 1 1564 193 86 8 chr17 44581097 44581459 -40857021 - L1ME1 LINE L1 -297 5869 5480 2082 59 33 4 chr17 44581460 44581730 -40856750 - AluY SINE Alu 0 311 34 822 139 30 18 chr17 44581831 44581997 -40856483 + L1MA4 LINE L1 6106 6273 -27 786 138 174 10 chr17 44582134 44582329 -40856151 + MER58B DNA MER1_type 105 331 -10 817 172 29 147 chr17 44582337 44582561 -40855919 + L1MC/D LINE L1 5073 5322 -856 1757 157 7 49 chr17 44582561 44582867 -40855613 + AluJb SINE Alu 1 293 -19 2456 54 7 0 chr17 44582869 44583163 -40855317 + AluY SINE Alu 1 296 -15 817 172 29 147 chr17 44583163 44583242 -40855238 + L1MC/D LINE L1 5323 5310 -868 1890 162 7 3 chr17 44583242 44583539 -40854941 + AluJo SINE Alu 1 298 -14 817 172 29 147 chr17 44583539 44583700 -40854780 + L1MC/D LINE L1 5309 5487 -691 2237 90 7 7 chr17 44583704 44584004 -40854476 + AluSq SINE Alu 1 300 -13 266 243 60 113 chr17 44584005 44584289 -40854191 + L1 LINE L1 3761 4029 -2117 316 285 38 63 chr17 44584454 44584612 -40853868 + L1 LINE L1 4157 4310 -1836 1993 92 38 63 chr17 44584772 44585089 -40853391 + AluSx SINE Alu 2 310 -2 2371 86 7 10 chr17 44585226 44585528 -40852952 - AluSx SINE Alu -11 301 1 368 227 63 34 chr17 44585605 44585640 -40852840 - MIR3 SINE MIR -1 207 174 1097 165 82 5 chr17 44585640 44585846 -40852634 + MER58A DNA MER1_type 3 224 0 368 227 63 34 chr17 44585846 44585952 -40852528 - MIR3 SINE MIR -34 174 65 2177 108 0 7 chr17 44586181 44586506 -40851974 + AluSx SINE Alu 1 323 0 351 215 62 62 chr17 44586575 44586705 -40851775 + L1MC/D LINE L1 5596 5725 -2083 192 359 0 11 chr17 44587073 44587165 -40851315 + MIR SINE MIR 49 139 -69 1750 148 6 70 chr17 44587413 44587589 -40850891 - AluJb SINE Alu -2 310 163 2645 48 0 3 chr17 44587589 44587901 -40850579 - AluY SINE Alu 0 311 1 1750 148 6 70 chr17 44587901 44588055 -40850425 - AluJb SINE Alu -149 163 1 2200 117 0 0 chr17 44589312 44589602 -40848878 + AluSx SINE Alu 1 290 -22 182 33 67 0 chr17 44589610 44589640 -40848840 + A-rich Low_complexity Low_complexity 4 35 0 345 297 50 0 chr17 44589833 44589934 -40848546 + MER5A DNA MER1_type 35 140 -49 425 251 23 114 chr17 44590128 44590228 -40848252 - MIR SINE MIR -59 203 124 2345 81 7 7 chr17 44590228 44590525 -40847955 + AluSc SINE Alu 1 297 -12 425 251 23 114 chr17 44590525 44590628 -40847852 - MIR SINE MIR -138 124 13 200 318 0 30 chr17 44590629 44590695 -40847785 + MIR SINE MIR 28 91 -171 367 144 200 0 chr17 44590898 44590988 -40847492 + MIR SINE MIR 82 189 -73 2205 141 0 0 chr17 44591001 44591313 -40847167 + AluSx SINE Alu 1 312 0 187 274 0 0 chr17 44592347 44592398 -40846082 + MIR SINE MIR 102 152 -110 1648 209 123 50 chr17 44593829 44594176 -40844304 + L1MC4 LINE L1 6968 7288 -754 1502 171 0 70 chr17 44594176 44594462 -40844018 - AluJb SINE Alu -45 267 2 1648 209 123 50 chr17 44594462 44594770 -40843710 + L1MC4 LINE L1 7288 7671 -371 615 219 201 9 chr17 44594935 44595154 -40843326 + MIR SINE MIR 2 262 0 1889 138 11 0 chr17 44595480 44595763 -40842717 - AluJb SINE Alu -13 299 14 465 196 31 10 chr17 44596489 44596586 -40841894 - MER91A DNA MER1_type -92 104 6 225 277 133 12 chr17 44596853 44596936 -40841544 + MIR3 SINE MIR 83 175 -33 1825 122 69 3 chr17 44596947 44597235 -40841245 - AluSx SINE Alu -5 307 1 242 241 184 11 chr17 44597668 44597755 -40840725 + MIR3 SINE MIR 93 194 -14 1260 81 6 0 chr17 44597775 44597935 -40840545 + AluSp SINE Alu 144 304 -9 594 173 22 43 chr17 44598169 44598308 -40840172 + MER2 DNA MER2_type 1 136 -209 1085 192 0 19 chr17 44598362 44598596 -40839884 - AluJo SINE Alu -44 268 1 1003 178 103 23 chr17 44598907 44599121 -40839359 + AluJo SINE Alu 82 312 0 486 287 55 70 chr17 44599132 44599606 -40838874 + L1M4 LINE L1 4151 4617 -1529 790 168 0 0 chr17 44599614 44599733 -40838747 - AluJb SINE Alu -22 290 172 237 342 83 35 chr17 44599790 44600018 -40838462 - L2 LINE L2 -208 3064 2826 1961 105 0 41 chr17 44600446 44600740 -40837740 - AluSq SINE Alu -25 288 7 1263 89 0 0 chr17 44600990 44601148 -40837332 - AluSg/x SINE Alu -15 297 140 292 309 15 0 chr17 44601152 44601220 -40837260 + L2 LINE L2 3204 3272 0 24 0 0 0 chr17 44601404 44601428 -40837052 + AT_rich Low_complexity Low_complexity 1 24 0 680 197 16 0 chr17 44601467 44601594 -40836886 - MIR SINE MIR -85 177 49 21 0 0 0 chr17 44601636 44601657 -40836823 + AT_rich Low_complexity Low_complexity 1 21 0 289 139 47 23 chr17 44601666 44601752 -40836728 + CT-rich Low_complexity Low_complexity 2 89 0 195 114 0 0 chr17 44601751 44601786 -40836694 + (TCCCC)n Simple_repeat Simple_repeat 2 36 0 * 1714 165 33 4 chr17 44601786 44602059 -40836421 - AluSx SINE Alu -31 281 1 1003 142 0 0 chr17 44602145 44602286 -40836194 + AluSg/x SINE Alu 133 273 -39 1989 152 0 13 chr17 44602373 44602675 -40835805 - 7SLRNA srpRNA srpRNA -10 310 13 4540 192 42 70 chr17 44602710 44602746 -40835734 + L1M4 LINE L1 2 37 -6505 2512 70 3 6 chr17 44602746 44603058 -40835422 + AluY SINE Alu 1 311 0 4540 192 42 70 chr17 44603058 44604227 -40834253 + L1M4 LINE L1 37 1173 -5369 711 169 15 15 chr17 44604227 44604357 -40834123 - FLAM_C SINE Alu -12 131 2 2277 197 34 44 chr17 44604357 44605012 -40833468 + L1M4 LINE L1 1170 1817 -4829 1067 222 9 9 chr17 44605014 44605235 -40833245 + AluJb SINE Alu 2 222 -90 330 227 61 53 chr17 44605508 44605640 -40832840 - AluJo SINE Alu -129 173 41 379 303 121 12 chr17 44606327 44606492 -40831988 + MER5A DNA MER1_type 7 189 0 196 344 87 46 chr17 44607099 44607294 -40831186 + L2 LINE L2 2992 3194 -78 2174 109 10 0 chr17 44607515 44607808 -40830672 - AluSx SINE Alu -16 296 1 382 250 17 17 chr17 44607808 44607924 -40830556 - MIR SINE MIR -16 246 131 762 228 90 62 chr17 44607947 44608302 -40830178 - L1MDa LINE L1 -4339 2201 1837 276 307 13 0 chr17 44608520 44608595 -40829885 - L2 LINE L2 -1018 2296 2221 2317 98 0 0 chr17 44608598 44608883 -40829597 + AluSc SINE Alu 1 285 -24 360 291 27 0 chr17 44609060 44609208 -40829272 + (TA)n Simple_repeat Simple_repeat 2 153 0 198 103 0 0 chr17 44609208 44609237 -40829243 + (CA)n Simple_repeat Simple_repeat 2 30 0 509 218 112 37 chr17 44609237 44609631 -40828849 + L1M4 LINE L1 2327 2798 -3964 803 169 0 0 chr17 44609632 44609750 -40828730 + FLAM_C SINE Alu 1 118 -25 1869 238 39 33 chr17 44609874 44609892 -40828588 + L1M4 LINE L1 2832 2848 -3796 2083 149 0 0 chr17 44609892 44610188 -40828292 - AluSx SINE Alu -16 296 1 2109 136 3 0 chr17 44610196 44610497 -40827983 - AluSx SINE Alu -10 302 1 1869 238 39 33 chr17 44610497 44611108 -40827372 + L1M4 LINE L1 2854 3474 -3170 2233 129 0 0 chr17 44611131 44611433 -40827047 + AluSx SINE Alu 1 302 -10 719 183 8 23 chr17 44611442 44611573 -40826907 + FLAM_C SINE Alu 5 133 0 1592 137 42 89 chr17 44611579 44611960 -40826520 + L1MA4 LINE L1 5769 6131 -169 2181 118 3 0 chr17 44612389 44612694 -40825786 - AluSx SINE Alu -6 306 1 352 291 173 11 chr17 44612701 44612880 -40825600 - HAL1 LINE L1 -210 2297 2090 2261 109 10 0 chr17 44612880 44613184 -40825296 + AluSx SINE Alu 1 307 -5 284 250 58 0 chr17 44613377 44613481 -40824999 - HAL1 LINE L1 -698 1809 1700 2146 141 0 0 chr17 44613562 44613861 -40824619 + AluJb SINE Alu 1 299 -13 180 0 0 0 chr17 44613887 44613907 -40824573 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 1300 159 81 63 chr17 44614050 44614321 -40824159 + AluJb SINE Alu 5 280 -32 189 0 0 0 chr17 44614324 44614345 -40824135 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 620 214 7 21 chr17 44614361 44614506 -40823974 + FLAM_C SINE Alu 1 143 0 668 176 8 8 chr17 44614641 44614766 -40823714 - AluJb SINE Alu -99 213 89 479 206 71 35 chr17 44615152 44615293 -40823187 + MER3 DNA MER1_type 7 152 -57 305 171 122 37 chr17 44615278 44615360 -40823120 - AluJo/FRAM SINE Alu -6 296 208 * 1716 167 3 55 chr17 44615361 44615548 -40822932 - AluJo SINE Alu -16 296 130 2216 120 7 0 chr17 44615548 44615848 -40822632 + AluSx SINE Alu 3 304 -8 1716 167 3 55 chr17 44615848 44615972 -40822508 - AluJo SINE Alu -182 130 1 317 182 0 0 chr17 44615974 44616029 -40822451 + MER3 DNA MER1_type 155 209 0 304 228 89 49 chr17 44616056 44616179 -40822301 - L1MC4a LINE L1 -1893 5915 5788 1687 185 7 17 chr17 44616641 44616939 -40821541 + AluJo SINE Alu 1 295 -17 353 310 8 8 chr17 44617557 44617686 -40820794 + MLT1H LTR MaLR 95 223 -326 246 225 101 34 chr17 44617977 44618066 -40820414 - MLT1J LTR MaLR -40 471 377 667 163 23 0 chr17 44618529 44618658 -40819822 + AluJo SINE Alu 2 133 -169 1960 140 33 0 chr17 44618814 44619114 -40819366 + AluSx SINE Alu 1 310 -2 2348 118 0 0 chr17 44619131 44619444 -40819036 + AluSq SINE Alu 1 313 0 399 154 0 39 chr17 44620288 44620366 -40818114 + MER21B LTR ERV1 12 86 -777 2052 110 63 0 chr17 44620429 44620764 -40817716 - L1PA14 LINE L1 -3 6158 5803 1627 230 68 14 chr17 44620776 44621376 -40817104 + MER21B LTR ERV1 19 682 -181 1002 152 18 12 chr17 44622172 44622343 -40816137 + AluJo SINE Alu 121 292 -20 2023 138 3 7 chr17 44622497 44622794 -40815686 - AluSx SINE Alu -16 296 1 232 329 67 75 chr17 44623026 44623172 -40815308 + MIR SINE MIR 2 147 -115 2173 72 15 4 chr17 44623172 44623437 -40815043 - AluY SINE Alu -9 302 35 232 329 67 75 chr17 44623437 44623545 -40814935 + MIR SINE MIR 147 254 -8 186 71 0 0 chr17 44627620 44627648 -40810832 + (A)n Simple_repeat Simple_repeat 1 28 0 1957 152 10 3 chr17 44627708 44628005 -40810475 - AluJb SINE Alu -13 299 1 240 313 0 0 chr17 44629670 44629737 -40808743 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 566 251 6 0 chr17 44629737 44629916 -40808564 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 321 267 0 0 chr17 44629959 44630075 -40808405 + (CCTA)n Simple_repeat Simple_repeat 2 117 0 252 89 18 54 chr17 44630084 44630140 -40808340 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 551 284 62 6 chr17 44630732 44630908 -40807572 - MIR SINE MIR -75 187 2 261 384 40 0 chr17 44631304 44631429 -40807051 + MIR SINE MIR 63 192 -70 721 178 0 0 chr17 44632107 44632225 -40806255 + AluJb SINE Alu 2 119 -193 207 0 0 0 chr17 44632227 44632250 -40806230 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 707 191 5 85 chr17 44632257 44632446 -40806034 + MIR SINE MIR 57 230 -32 766 241 58 5 chr17 44632549 44632740 -40805740 - MER3 DNA MER1_type -8 201 1 2355 268 206 16 chr17 44634246 44634648 -40803832 + L2 LINE L2 1360 1684 -1629 2138 108 10 14 chr17 44634648 44634945 -40803535 + AluSx SINE Alu 1 296 -16 2355 268 206 16 chr17 44634945 44636183 -40802297 + L2 LINE L2 1684 3311 -2 1766 185 37 0 chr17 44636701 44636998 -40801482 + AluSx SINE Alu 1 308 -4 1500 133 4 13 chr17 44637031 44637082 -40801398 + AluSq SINE Alu 85 135 -178 2112 115 14 3 chr17 44637082 44637377 -40801103 + AluSp SINE Alu 1 298 -15 1500 133 4 13 chr17 44637377 44637551 -40800929 + AluSq SINE Alu 135 308 -5 2364 97 0 13 chr17 44638261 44638570 -40799910 - AluSx SINE Alu -7 305 1 3229 163 15 26 chr17 44638593 44638650 -40799830 - L1MB7 LINE L1 -15 6169 6113 1968 136 16 36 chr17 44638650 44638958 -40799522 + AluJb SINE Alu 1 302 -10 3229 163 15 26 chr17 44638958 44639564 -40798916 - L1MB7 LINE L1 -71 6113 5513 1698 199 30 24 chr17 44639595 44639651 -40798829 - L1MB7 LINE L1 -803 5343 5289 1306 154 101 154 chr17 44639651 44640062 -40798418 + MLT1C LTR MaLR 1 432 -35 2137 130 17 0 chr17 44640062 44640354 -40798126 - AluSx SINE Alu -15 297 1 180 0 0 0 chr17 44640356 44640376 -40798104 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1802 154 7 7 chr17 44640376 44640656 -40797824 - AluJb SINE Alu -31 281 2 2401 71 0 10 chr17 44640664 44640986 -40797494 - AluY SINE Alu 0 311 1 1306 154 101 154 chr17 44640986 44641054 -40797426 + MLT1C LTR MaLR 439 467 0 1698 199 30 24 chr17 44641054 44641423 -40797057 - L1MB7 LINE L1 -857 5289 4915 2014 147 0 13 chr17 44642604 44642904 -40795576 + AluSx SINE Alu 5 300 -12 2257 135 0 0 chr17 44643182 44643493 -40794987 - AluSx SINE Alu -1 311 1 315 253 88 11 chr17 44644057 44644148 -40794332 + L2 LINE L2 3174 3271 -1 337 193 0 0 chr17 44644610 44644667 -40793813 - AluS SINE Alu -246 57 1 604 249 58 58 chr17 44644906 44645167 -40793313 - L2 LINE L2 -9 3304 3044 2114 134 0 3 chr17 44645227 44645517 -40792963 + AluSx SINE Alu 1 289 -23 2222 239 50 16 chr17 44645960 44646870 -40791610 + L1ME3 LINE L1 4895 5830 -332 1103 149 6 0 chr17 44646886 44647047 -40791433 - AluJo SINE Alu -150 162 1 764 195 86 0 chr17 44647047 44647233 -40791247 - MER33 DNA MER1_type -248 76 1 1835 142 54 7 chr17 44647297 44647592 -40790888 + AluSg SINE Alu 1 309 -1 293 191 0 90 chr17 44647613 44647702 -40790778 - MIR SINE MIR -70 138 58 2247 107 0 3 chr17 44649591 44649882 -40788598 + AluSg1 SINE Alu 1 290 -19 1200 220 25 0 chr17 44649886 44650172 -40788308 + L1M4 LINE L1 4850 5142 -1004 972 102 23 0 chr17 44650284 44650412 -40788068 - AluYa5 SINE Alu -180 131 1 2267 179 7 1 chr17 44650412 44650918 -40787562 + L1M4 LINE L1 5159 5670 -504 2213 104 23 10 chr17 44650925 44651232 -40787248 + AluSx SINE Alu 1 311 -1 550 246 213 63 chr17 44652430 44652751 -40785729 + L1MC4a LINE L1 5442 5713 -2095 870 98 0 15 chr17 44652751 44652884 -40785596 + FLAM_C SINE Alu 1 131 -2 550 246 213 63 chr17 44652884 44653003 -40785477 + L1MC4a LINE L1 5713 5813 -1995 2535 67 0 0 chr17 44653003 44653302 -40785178 - AluY SINE Alu -12 299 1 550 246 213 63 chr17 44653302 44653446 -40785034 + L1MC4a LINE L1 5813 6115 -1693 2468 90 0 3 chr17 44653490 44653801 -40784679 - AluY SINE Alu -1 310 1 893 140 7 14 chr17 44654133 44654276 -40784204 - FLAM_C SINE Alu -1 142 1 185 220 198 55 chr17 44654276 44654367 -40784113 - MIR SINE MIR -157 105 2 260 273 0 0 chr17 44654470 44654525 -40783955 + polypurine Low_complexity Low_complexity 1 55 0 1502 171 19 30 chr17 44655312 44655576 -40782904 + AluJb SINE Alu 1 261 -51 426 82 35 0 chr17 44655577 44655662 -40782818 + (TA)n Simple_repeat Simple_repeat 2 89 0 193 246 92 15 chr17 44656008 44656073 -40782407 + MER5A DNA MER1_type 35 104 -85 185 143 167 0 chr17 44656299 44656341 -40782139 + L3 LINE CR1 1320 1368 -209 2043 118 4 0 chr17 44656624 44656895 -40781585 + AluSg SINE Alu 24 295 -15 473 213 0 21 chr17 44656960 44657054 -40781426 - MER58B DNA MER1_type -18 323 232 300 233 70 47 chr17 44657761 44657847 -40780633 - L1ME4a LINE L1 -56 6065 5978 1021 158 0 6 chr17 44658129 44658287 -40780193 + FRAM SINE Alu 1 157 -19 430 269 69 14 chr17 44658297 44658442 -40780038 + MIR SINE MIR 33 185 -77 279 95 24 0 chr17 44658492 44658534 -40779946 - U7 snRNA snRNA -6 57 15 1247 111 0 61 chr17 44658537 44658683 -40779797 + AluSx SINE Alu 1 154 -466 2303 67 3 0 chr17 44658683 44658983 -40779497 + AluY SINE Alu 1 301 -10 1247 111 0 61 chr17 44658983 44659168 -40779312 + AluSx SINE Alu 154 620 0 395 221 52 0 chr17 44659208 44659285 -40779195 + L2 LINE L2 3186 3266 -6 313 269 113 43 chr17 44659318 44659459 -40779021 + L1ME4a LINE L1 5902 6052 -69 4721 142 61 41 chr17 44659513 44659646 -40778834 - L1MB7 LINE L1 -5 6179 6050 2027 110 0 3 chr17 44659646 44659972 -40778508 + AluSx SINE Alu 1 325 0 4721 142 61 41 chr17 44659972 44660915 -40777565 - L1MB7 LINE L1 -134 6050 5087 353 22 22 0 chr17 44662859 44662905 -40775575 + (GGGTG)n Simple_repeat Simple_repeat 4 50 0 398 270 74 27 chr17 44663135 44663283 -40775197 - MIR SINE MIR -39 223 69 4765 122 101 7 chr17 44663354 44664180 -40774300 + MER4D LTR ERV1 1 903 0 1686 106 3 75 chr17 44665082 44665375 -40773105 + AluSx SINE Alu 1 272 -40 189 0 0 0 chr17 44665375 44665396 -40773084 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 2424 47 0 3 chr17 44665406 44665728 -40772752 + AluY SINE Alu 6 326 0 22 0 0 0 chr17 44665737 44665759 -40772721 + AT_rich Low_complexity Low_complexity 1 22 0 2292 53 32 0 chr17 44665767 44666050 -40772430 + AluY SINE Alu 1 292 -19 389 189 81 0 chr17 44666717 44666791 -40771689 - MIR SINE MIR -70 192 113 410 301 10 10 chr17 44667755 44667858 -40770622 + L2 LINE L2 3207 3309 -4 2115 101 7 3 chr17 44668122 44668429 -40770051 + AluSp SINE Alu 1 308 -5 845 242 33 90 chr17 44670189 44670303 -40768177 + L1MB7 LINE L1 1448 1567 -4817 721 273 28 31 chr17 44670303 44670592 -40767888 + AluJb SINE Alu 3 290 -12 845 242 33 90 chr17 44670592 44670812 -40767668 + L1MB7 LINE L1 1567 1763 -4621 2051 136 0 0 chr17 44670813 44671121 -40767359 + AluSx SINE Alu 2 309 -3 418 266 46 23 chr17 44671131 44671304 -40767176 + L1MB7 LINE L1 1991 2167 -4217 927 192 6 0 chr17 44671304 44671476 -40767004 - AluJo SINE Alu -139 173 1 2217 88 0 19 chr17 44671483 44671801 -40766679 - AluSx SINE Alu 0 312 1 246 146 0 0 chr17 44671871 44671912 -40766568 - L1P4 LINE L1 -417 5751 5711 * 1886 227 22 12 chr17 44671906 44672412 -40766068 + L1MB7 LINE L1 4819 5329 -1053 4204 184 39 22 chr17 44672593 44673648 -40764832 + L1MB7 LINE L1 5332 6401 -19 182 258 117 100 chr17 44673711 44673831 -40764649 - MIR3 SINE MIR -72 136 15 762 169 0 0 chr17 44674086 44674204 -40764276 + FLAM_C SINE Alu 1 118 -15 21 0 0 0 chr17 44674585 44674606 -40763874 + AT_rich Low_complexity Low_complexity 1 21 0 800 128 0 16 chr17 44674626 44674751 -40763729 - FLAM_C SINE Alu -19 124 2 2049 125 3 16 chr17 44675529 44675840 -40762640 - AluSx SINE Alu -5 307 1 316 280 206 21 chr17 44675912 44676101 -40762379 + MIR SINE MIR 20 243 -19 618 233 6 78 chr17 44676340 44676520 -40761960 + MIR SINE MIR 63 229 -33 304 273 0 0 chr17 44676486 44676552 -40761928 - MIR SINE MIR -10 252 187 * 597 216 10 31 chr17 44677410 44677561 -40760919 + LTR39 LTR ERV1 475 783 0 434 204 132 79 chr17 44677700 44677852 -40760628 - MER69 DNA AcHobo 0 2526 18 311 145 43 58 chr17 44678489 44678558 -40759922 + L2 LINE L2 3201 3268 -4 1939 108 22 0 chr17 44678649 44678950 -40759530 - AluSx SINE Alu 0 307 1 685 85 0 21 chr17 44679485 44679579 -40758901 + AluS SINE Alu 2 93 -219 1741 110 4 0 chr17 44679584 44679830 -40758650 - AluSq SINE Alu -56 257 11 996 111 7 13 chr17 44679956 44680109 -40758371 - AluSx SINE Alu -159 153 2 217 263 0 35 chr17 44680205 44680262 -40758218 + MIR SINE MIR 96 150 -58 1032 212 33 0 chr17 44680701 44680913 -40757567 - MER20 DNA MER1_type 0 219 1 1942 100 4 4 chr17 44681518 44681825 -40756655 + AluY SINE Alu 1 307 0 597 234 23 0 chr17 44682201 44682329 -40756151 + MER5A DNA MER1_type 37 167 -22 238 270 102 66 chr17 44682693 44682830 -40755650 + L2 LINE L2 3172 3313 0 23 33 0 0 chr17 44683330 44683360 -40755120 + AT_rich Low_complexity Low_complexity 1 30 0 697 263 38 16 chr17 44683491 44683677 -40754803 - MER58C DNA MER1_type -11 204 15 234 314 0 68 chr17 44683859 44683977 -40754503 - MIR3 SINE MIR -3 205 96 21 0 0 0 chr17 44684527 44684548 -40753932 + AT_rich Low_complexity Low_complexity 1 21 0 686 168 17 0 chr17 44684548 44684667 -40753813 - FLAM_C SINE Alu -12 121 1 312 195 116 79 chr17 44684668 44684838 -40753642 - L1ME3A LINE L1 -49 6115 5931 2057 124 0 3 chr17 44684848 44685146 -40753334 + AluSq SINE Alu 1 297 -16 1326 109 31 0 chr17 44685146 44685338 -40753142 - AluSq SINE Alu -114 199 2 957 321 99 12 chr17 44685490 44686088 -40752392 + L1MC4a LINE L1 5284 5933 -1875 309 280 26 83 chr17 44686120 44686273 -40752207 + L1ME4a LINE L1 5939 6080 -41 1755 181 3 0 chr17 44686273 44686583 -40751897 + AluJb SINE Alu 1 311 -1 309 280 26 83 chr17 44686583 44686622 -40751858 + L1ME4a LINE L1 6080 6120 -1 227 331 60 36 chr17 44687546 44687712 -40750768 + L2 LINE L2 2715 2884 -430 2421 66 0 10 chr17 44687939 44688244 -40750236 - AluY SINE Alu -9 302 1 887 228 66 0 chr17 44688395 44688606 -40749874 - MIR SINE MIR -25 237 13 246 62 0 0 chr17 44691780 44691812 -40746668 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 1982 116 7 0 chr17 44692497 44692801 -40745679 + AluSq SINE Alu 1 306 0 26 30 0 0 chr17 44692934 44692967 -40745513 + AT_rich Low_complexity Low_complexity 1 33 0 1452 155 59 50 chr17 44693153 44693427 -40745053 - Tigger3(Golem) DNA MER2_type 0 3028 2749 2269 112 0 3 chr17 44693427 44693740 -40744740 + AluSx SINE Alu 1 312 0 1452 155 59 50 chr17 44693740 44693768 -40744712 - Tigger3(Golem) DNA MER2_type -279 2749 2723 440 225 56 0 chr17 44693762 44693851 -40744629 - Tigger3(Golem) DNA MER2_type -2935 94 1 * 2169 120 0 0 chr17 44694327 44694635 -40743845 - AluSg SINE Alu -2 308 1 1772 94 144 0 chr17 44694637 44694893 -40743587 - AluSp SINE Alu -10 293 1 1500 182 45 0 chr17 44695169 44695460 -40743020 - AluJo SINE Alu -8 304 1 347 270 93 93 chr17 44696387 44696646 -40741834 - MIR SINE MIR 0 262 4 1774 130 36 0 chr17 44697377 44697654 -40740826 + AluSx SINE Alu 1 287 -25 1510 135 92 39 chr17 44697656 44697937 -40740543 + AluSx SINE Alu 1 296 -16 1979 133 3 0 chr17 44698160 44698453 -40740027 + AluSg SINE Alu 1 294 -16 1557 189 17 0 chr17 44698508 44698804 -40739676 + AluJo SINE Alu 11 311 -1 332 71 0 0 chr17 44698866 44698908 -40739572 - 5S rRNA rRNA -79 42 1 2213 78 0 0 chr17 44699029 44699312 -40739168 + AluSc SINE Alu 1 283 -26 220 162 0 27 chr17 44699312 44699386 -40739094 + (TTAA)n Simple_repeat Simple_repeat 1 72 0 313 290 52 58 chr17 44700756 44700911 -40737569 + L2 LINE L2 3160 3313 0 2269 61 7 3 chr17 44701001 44701296 -40737184 - AluY SINE Alu -14 297 2 189 0 0 0 chr17 44701485 44701506 -40736974 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 1976 119 31 0 chr17 44701626 44701919 -40736561 + AluSq SINE Alu 1 302 -11 1920 115 21 7 chr17 44702757 44703043 -40735437 + AluSx SINE Alu 1 290 -22 656 165 70 0 chr17 44703052 44703167 -40735313 + FLAM_A SINE Alu 1 123 -10 1113 96 0 19 chr17 44703179 44703335 -40735145 - AluSq SINE Alu -160 153 1 331 138 154 0 chr17 44703335 44703400 -40735080 - MER5A DNA MER1_type -113 76 2 185 250 21 0 chr17 44703590 44703638 -40734842 + MER5A DNA MER1_type 61 109 -80 1387 251 70 5 chr17 44904507 44904881 -40533599 + MLT1J LTR MaLR 39 436 -75 495 276 112 44 chr17 44905338 44905588 -40532892 + MLT1K LTR MaLR 307 573 -15 185 226 94 0 chr17 44905897 44905950 -40532530 - MER5A DNA MER1_type 0 189 132 2012 79 0 16 chr17 44905959 44906211 -40532269 + AluY SINE Alu 1 248 -63 4800 118 26 34 chr17 44906311 44906365 -40532115 - Tigger3b DNA MER2_type -2158 870 817 2297 107 0 3 chr17 44906365 44906665 -40531815 - AluSp SINE Alu -14 299 1 4800 118 26 34 chr17 44906665 44907242 -40531238 - Tigger3b DNA MER2_type -2211 817 245 2273 113 0 0 chr17 44907242 44907534 -40530946 - AluSx SINE Alu -20 292 1 4800 118 26 34 chr17 44907534 44907746 -40530734 - Tigger3b DNA MER2_type -2783 245 33 696 162 110 7 chr17 44907766 44907902 -40530578 - MLT1D LTR MaLR -32 473 324 442 304 103 10 chr17 44908505 44908709 -40529771 - MIR SINE MIR -19 243 21 355 259 122 0 chr17 44908921 44909052 -40529428 + MIR3 SINE MIR 30 176 -32 236 327 28 0 chr17 44909778 44909885 -40528595 + (TG)n Simple_repeat Simple_repeat 2 111 0 827 144 8 0 chr17 44909998 44910130 -40528350 - FLAM_C SINE Alu 0 133 1 184 324 56 0 chr17 44910269 44910340 -40528140 + L2 LINE L2 2972 3046 -226 229 284 15 0 chr17 44910341 44910408 -40528072 + L1MC4 LINE L1 7845 7912 -130 230 261 0 22 chr17 44910422 44910514 -40527966 - L1MC4 LINE L1 -1339 6703 6614 183 156 0 0 chr17 44910514 44910546 -40527934 + (CATA)n Simple_repeat Simple_repeat 4 35 0 392 191 84 15 chr17 44910553 44910684 -40527796 + L1MC4 LINE L1 7903 8042 0 2484 91 0 0 chr17 44911236 44911545 -40526935 + AluY SINE Alu 1 309 -2 2342 92 0 0 chr17 44913131 44913413 -40525067 - AluSg SINE Alu -28 282 1 285 318 26 20 chr17 44913708 44913859 -40524621 + GA-rich Low_complexity Low_complexity 3 154 0 1992 134 10 13 chr17 44913859 44914165 -40524315 - AluJo SINE Alu -7 305 1 1252 14 0 0 chr17 44914193 44914375 -40524105 + L1PA5 LINE L1 5993 6174 0 2229 108 13 0 chr17 44914807 44915114 -40523366 + AluSx SINE Alu 1 311 -1 192 261 49 99 chr17 44915129 44915271 -40523209 - L2 LINE L2 -612 2702 2568 1491 156 100 22 chr17 44915301 44915570 -40522910 + AluJo SINE Alu 1 290 -22 1849 187 11 75 chr17 44917068 44917142 -40521338 + MER82 DNA MER2_type 233 310 -343 1797 183 13 22 chr17 44917142 44917454 -40521026 - AluJo SINE Alu -3 309 1 1849 187 11 75 chr17 44917454 44917534 -40520946 + MER82 DNA MER2_type 310 393 -260 2048 118 9 40 chr17 44917534 44917856 -40520624 + AluSx SINE Alu 1 312 0 1849 187 11 75 chr17 44917856 44918143 -40520337 + MER82 DNA MER2_type 393 647 -6 1957 144 24 3 chr17 44919049 44919347 -40519133 - AluJb SINE Alu -3 309 6 1170 111 45 15 chr17 44919368 44919566 -40518914 - L1MC1 LINE L1 -2 6331 6128 224 108 0 0 chr17 44919874 44919911 -40518569 - MIR SINE MIR -68 140 104 340 183 40 12 chr17 44920116 44920225 -40518255 + MIR SINE MIR 37 149 -67 211 359 0 51 chr17 44920284 44920401 -40518079 + L2 LINE L2 3197 3307 -6 784 158 25 64 chr17 44920934 44921136 -40517344 - MER96B DNA MER1_type? -41 376 183 2262 91 32 0 chr17 44921159 44921444 -40517036 + AluSg SINE Alu 1 294 -16 336 143 0 0 chr17 44922453 44922509 -40515971 + (CA)n Simple_repeat Simple_repeat 2 57 0 954 81 8 8 chr17 44922577 44922700 -40515780 + AluSq/x SINE Alu 1 123 -190 658 148 180 8 chr17 44922802 44922930 -40515550 - AluSq/x SINE Alu -161 151 2 2239 204 61 43 chr17 44922933 44923112 -40515368 + MER97b DNA MER1_type? 197 371 -682 2375 94 3 16 chr17 44923112 44923421 -40515059 - AluSx SINE Alu -6 306 2 2239 204 61 43 chr17 44923421 44923618 -40514862 + MER97b DNA MER1_type? 371 563 -490 1974 169 16 3 chr17 44923618 44923926 -40514554 - AluSx SINE Alu 0 312 1 2239 204 61 43 chr17 44923926 44924199 -40514281 + MER97b DNA MER1_type? 563 859 -194 516 272 13 47 chr17 44924300 44924532 -40513948 + MER97c DNA MER1_type? 867 1090 0 606 272 38 0 chr17 44925066 44925224 -40513256 + MIR SINE MIR 12 175 -87 2112 141 0 22 chr17 44925296 44925609 -40512871 - AluSx SINE Alu -2 310 5 203 336 8 16 chr17 44925753 44925875 -40512605 + (CCG)n Simple_repeat Simple_repeat 1 121 0 387 0 0 0 chr17 44926245 44926288 -40512192 + (TG)n Simple_repeat Simple_repeat 1 43 0 21 36 0 0 chr17 44927945 44927973 -40510507 + AT_rich Low_complexity Low_complexity 1 28 0 814 286 0 17 chr17 44928347 44928578 -40509902 + MIR SINE MIR 36 262 0 327 314 21 21 chr17 44928857 44928997 -40509483 + MLT1J LTR MaLR 1 140 -371 216 86 0 0 chr17 44929169 44929204 -40509276 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 315 263 13 0 chr17 44929213 44929289 -40509191 - MER58 DNA MER1_type -128 87 11 215 176 0 39 chr17 44930557 44930608 -40507872 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 2064 158 0 3 chr17 44930779 44931083 -40507397 - AluJo SINE Alu -9 303 1 660 164 70 2 chr17 44931095 44931242 -40507238 - L1MC3 LINE L1 0 8042 7645 265 277 143 0 chr17 44931849 44931961 -40506519 + L1ME4a LINE L1 5990 6117 -4 720 138 0 32 chr17 44931995 44932118 -40506362 + FLAM_C SINE Alu 1 119 -24 511 104 0 0 chr17 44932433 44932510 -40505970 + AluSg/x SINE Alu 216 292 -18 27 0 0 0 chr17 44932531 44932558 -40505922 + AT_rich Low_complexity Low_complexity 1 27 0 200 282 43 68 chr17 44932813 44932930 -40505550 + MIR SINE MIR 21 134 -74 2321 116 3 0 chr17 44933091 44933402 -40505078 - AluSx SINE Alu 0 312 1 2106 146 10 0 chr17 44933971 44934280 -40504200 + AluJo SINE Alu 1 312 0 790 225 45 0 chr17 44935368 44935546 -40502934 - MER82 DNA MER2_type -452 201 16 405 350 123 28 chr17 44935635 44935983 -40502497 + L2 LINE L2 2833 3225 -47 1740 126 52 68 chr17 44935983 44936181 -40502299 - THE1C LTR MaLR 0 375 184 2338 112 0 0 chr17 44936181 44936476 -40502004 - AluSx SINE Alu -17 295 1 1740 126 52 68 chr17 44936476 44936658 -40501822 - THE1C LTR MaLR -191 184 1 405 350 123 28 chr17 44936658 44936709 -40501771 + L2 LINE L2 3225 3270 -2 375 41 0 0 chr17 44937273 44937322 -40501158 + (CA)n Simple_repeat Simple_repeat 1 49 0 355 296 130 0 chr17 44937718 44937833 -40500647 - MIR3 SINE MIR -30 178 49 542 174 73 0 chr17 44937899 44938008 -40500472 + MER20 DNA MER1_type 6 122 -97 1759 166 3 24 chr17 44938298 44938454 -40500026 - AluJo SINE Alu -23 289 140 1947 149 7 3 chr17 44938454 44938755 -40499725 - AluJb SINE Alu -6 306 5 1759 166 3 24 chr17 44938755 44938893 -40499587 - AluJo SINE Alu -172 140 1 475 129 47 0 chr17 44938898 44938983 -40499497 - MER20 DNA MER1_type -42 177 89 2203 98 9 15 chr17 44939178 44939505 -40498975 - LTR8 LTR ERV1 0 691 367 2057 128 17 0 chr17 44939620 44939917 -40498563 + AluSx SINE Alu 1 302 -10 496 323 96 9 chr17 44941061 44941290 -40497190 - MIR SINE MIR -12 250 2 793 226 49 18 chr17 44942382 44942623 -40495857 + MIR SINE MIR 5 251 -11 801 166 134 27 chr17 44942645 44942832 -40495648 - MER20 DNA MER1_type -9 210 4 414 197 197 53 chr17 44943832 44943914 -40494566 + MLT1I LTR MaLR 236 305 -104 2198 127 7 0 chr17 44943914 44944213 -40494267 + AluSx SINE Alu 1 301 -11 414 197 197 53 chr17 44944213 44944282 -40494198 + MLT1I LTR MaLR 305 409 0 264 279 207 9 chr17 44944845 44944956 -40493524 + MIR3 SINE MIR 3 135 -73 557 257 79 54 chr17 44945152 44945432 -40493048 - MLT1J2 LTR MaLR -148 302 16 553 215 120 0 chr17 44945651 44945809 -40492671 - Charlie4 DNA MER1_type -3 1958 1782 1064 252 102 50 chr17 44945809 44946171 -40492309 + LTR16A LTR ERVL 1 343 -107 2120 139 0 0 chr17 44946171 44946459 -40492021 + AluSx SINE Alu 1 288 -24 1064 252 102 50 chr17 44946459 44946476 -40492004 + LTR16A LTR ERVL 343 358 -92 230 56 28 0 chr17 44946476 44946512 -40491968 + (CAA)n Simple_repeat Simple_repeat 2 38 0 1064 252 102 50 chr17 44946512 44946552 -40491928 + LTR16A LTR ERVL 358 443 -7 958 241 65 13 chr17 44946559 44946791 -40491689 + HERV16 LTR ERVL 1 244 -4752 918 201 0 34 chr17 44946853 44946875 -40491605 + HERV16 LTR ERVL 470 491 -4505 2419 100 45 0 chr17 44946875 44947234 -40491246 + THE1C LTR MaLR 1 375 0 918 201 0 34 chr17 44947234 44947390 -40491090 + HERV16 LTR ERVL 491 642 -4354 1908 276 50 32 chr17 44947444 44947771 -40490709 + HERV16 LTR ERVL 747 1067 -3929 2017 124 3 28 chr17 44947771 44948098 -40490382 + AluSx SINE Alu 2 321 0 1908 276 50 32 chr17 44948098 44948318 -40490162 + HERV16 LTR ERVL 1067 1312 -3684 1641 158 44 7 chr17 44948318 44948635 -40489845 + AluJb SINE Alu 1 327 0 1908 276 50 32 chr17 44948635 44948740 -40489740 + HERV16 LTR ERVL 1312 1414 -3582 929 281 33 14 chr17 44949303 44949441 -40489039 + HERV16 LTR ERVL 1433 1567 -3429 2264 120 0 0 chr17 44949441 44949749 -40488731 + AluSg SINE Alu 1 308 -2 929 281 33 14 chr17 44949749 44950192 -40488288 + HERV16 LTR ERVL 1567 2142 -2854 1054 295 108 22 chr17 44950394 44950855 -40487625 + HERV16 LTR ERVL 2173 2673 -2323 643 217 24 12 chr17 44950855 44951021 -40487459 + LTR41 LTR ERVL 1 168 -605 2477 109 0 0 chr17 44951021 44951332 -40487148 + AluSx SINE Alu 1 311 -1 310 170 54 25 chr17 44951749 44951855 -40486625 + LTR41 LTR ERVL 672 795 0 3556 368 29 10 chr17 44951878 44953132 -40485348 + HERV16 LTR ERVL 2698 4001 -1653 2320 102 7 0 chr17 44953132 44953435 -40485045 + AluSx SINE Alu 1 305 -7 3556 368 29 10 chr17 44953435 44954028 -40484452 + HERV16 LTR ERVL 4001 4581 -1073 920 199 39 114 chr17 44954132 44954195 -40484285 + MLT1D LTR MaLR 1 67 -438 1465 116 0 0 chr17 44954195 44954426 -40484054 - AluSg/x SINE Alu 0 322 92 920 199 39 114 chr17 44954426 44954634 -40483846 + MLT1D LTR MaLR 67 242 -263 2300 101 0 44 chr17 44954634 44954952 -40483528 - AluSx SINE Alu -8 304 1 920 199 39 114 chr17 44954952 44955039 -40483441 + MLT1D LTR MaLR 242 334 -171 238 371 36 14 chr17 44955445 44955585 -40482895 - MER5B DNA MER1_type -34 144 2 1239 178 5 5 chr17 44955594 44955813 -40482667 + MER20 DNA MER1_type 1 219 0 183 262 75 56 chr17 44955935 44956042 -40482438 + MIR SINE MIR 19 127 -81 271 232 0 125 chr17 44956811 44956923 -40481557 + MER5C DNA MER1_type 3 100 -224 338 256 11 0 chr17 44957342 44957432 -40481048 - MIR SINE MIR -77 131 41 218 291 111 34 chr17 44958181 44958252 -40480228 - L2 LINE L2 -1 3271 3186 215 30 0 30 chr17 44958252 44958285 -40480195 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 218 291 111 34 chr17 44958285 44958330 -40480150 - L2 LINE L2 -86 3186 3146 297 0 0 0 chr17 44959315 44959348 -40479132 + (TG)n Simple_repeat Simple_repeat 1 33 0 285 29 0 0 chr17 44959347 44959381 -40479099 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 2230 116 7 0 chr17 44960597 44960899 -40477581 - AluSx SINE Alu -8 304 1 344 273 0 0 chr17 44962292 44962369 -40476111 + MIR SINE MIR 74 150 -112 334 250 103 52 chr17 44964358 44964397 -40474083 + L2 LINE L2 3151 3187 -85 2373 103 0 0 chr17 44964397 44964699 -40473781 - AluSx SINE Alu -10 302 1 334 250 103 52 chr17 44964699 44964775 -40473705 + L2 LINE L2 3187 3272 0 377 256 101 8 chr17 44965016 44965145 -40473335 + MIR3 SINE MIR 66 206 -2 453 297 34 29 chr17 44965183 44965358 -40473122 + MIR SINE MIR 33 208 -54 2489 57 40 0 chr17 44965365 44965663 -40472817 + AluY SINE Alu 1 310 -1 276 149 0 0 chr17 44966140 44966187 -40472293 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 202 271 164 25 chr17 44966189 44966311 -40472169 - MIR SINE MIR -9 253 115 962 275 73 3 chr17 44966809 44967125 -40471355 - L3 LINE CR1 -62 1515 1178 609 218 112 27 chr17 44967189 44967377 -40471103 - MIR SINE MIR -1 261 58 253 167 0 0 chr17 44967377 44967419 -40471061 - 5S rRNA rRNA -79 42 1 1857 148 3 45 chr17 44968443 44968587 -40469893 + AluJb SINE Alu 1 127 -185 2328 119 0 0 chr17 44968587 44968890 -40469590 + AluSx SINE Alu 1 303 -9 1857 148 3 45 chr17 44968890 44969055 -40469425 + AluJb SINE Alu 127 297 -15 1974 181 29 95 chr17 44969085 44969610 -40468870 + MLT1D LTR MaLR 16 505 0 225 294 22 11 chr17 44969813 44969905 -40468575 - MIR SINE MIR -150 112 20 200 125 50 0 chr17 44970034 44970074 -40468406 + T-rich Low_complexity Low_complexity 3 44 0 2070 140 0 13 chr17 44970086 44970386 -40468094 - AluJo SINE Alu -7 305 10 209 313 107 15 chr17 44972875 44973006 -40465474 - MIR3 SINE MIR -65 143 1 1426 193 89 4 chr17 44973340 44973620 -40464860 - AluJo SINE Alu -8 304 1 378 279 46 31 chr17 44973952 44974136 -40464344 + MIR3 SINE MIR 12 201 -7 4036 85 21 85 chr17 44974465 44975174 -40463306 + MER4A LTR ERV1 1 664 0 302 283 152 35 chr17 44975310 44975508 -40462972 + MLT1K LTR MaLR 183 403 -185 456 261 42 47 chr17 44976459 44976674 -40461806 - L2 LINE L2 -258 3055 2842 869 139 0 0 chr17 44976807 44976922 -40461558 + AluJo/FLAM SINE Alu 11 125 -187 1418 120 53 14 chr17 44976924 44977156 -40461324 + AluJb SINE Alu 86 312 0 539 305 130 11 chr17 44977363 44977724 -40460756 - L1MC4a LINE L1 -1853 5955 5552 709 192 0 27 chr17 44977759 44977905 -40460575 - FLAM_C SINE Alu 0 143 2 472 226 52 0 chr17 44977909 44978024 -40460456 - L1MD3 LINE L1 -12 7983 7863 1993 106 15 234 chr17 44978024 44978638 -40459842 + LTR12 LTR ERV1 2 480 -234 461 200 0 0 chr17 44978638 44978733 -40459747 - L1MD3 LINE L1 -127 7868 7774 414 217 56 37 chr17 44978734 44978895 -40459585 - L1MC4a LINE L1 -735 5435 5272 268 246 0 0 chr17 44978899 44978956 -40459524 - MIR SINE MIR -107 101 45 918 235 81 73 chr17 44979728 44980161 -40458319 + MLT1C LTR MaLR 12 451 -16 1154 167 32 0 chr17 44980223 44980439 -40458041 + LTR26 LTR ERV1 381 603 0 464 186 203 17 chr17 44980689 44980807 -40457673 + MER58B DNA MER1_type 202 341 0 866 168 15 61 chr17 44980815 44980936 -40457544 - MER5A DNA MER1_type 0 189 79 2334 109 0 3 chr17 44980936 44981249 -40457231 - AluSx SINE Alu 0 312 1 866 168 15 61 chr17 44981249 44981323 -40457157 - MER5A DNA MER1_type -110 79 3 2130 131 23 0 chr17 44981355 44981660 -40456820 - AluSx SINE Alu 0 312 1 1346 186 32 63 chr17 44982543 44983054 -40455426 + L1MB3 LINE L1 5005 5491 -692 2077 138 3 16 chr17 44983054 44983386 -40455094 + AluSq SINE Alu 1 313 0 1346 186 32 63 chr17 44983386 44983496 -40454984 + L1MB3 LINE L1 5491 5603 -580 1799 167 0 24 chr17 44983500 44983810 -40454670 + AluJo SINE Alu 1 303 0 610 170 27 9 chr17 44983823 44983925 -40454555 + FLAM_A SINE Alu 13 119 -192 396 55 0 0 chr17 44983925 44983980 -40454500 + (CATA)n Simple_repeat Simple_repeat 2 56 0 1763 213 86 150 chr17 44983989 44984071 -40454409 + L1MB3 LINE L1 5599 5685 -498 236 111 22 0 chr17 44984071 44984116 -40454364 - MADE1 DNA Mariner -34 46 1 1763 213 86 150 chr17 44984116 44984614 -40453866 + L1MB3 LINE L1 5685 6183 0 910 229 64 87 chr17 44985025 44985291 -40453189 - MLT1D LTR MaLR -12 493 196 2382 104 3 0 chr17 44985326 44985625 -40452855 - AluSq SINE Alu -13 300 1 2054 135 3 3 chr17 44985636 44985933 -40452547 - AluSx SINE Alu -15 297 1 596 188 83 92 chr17 44985933 44986151 -40452329 - MLT1D LTR MaLR -289 216 1 204 154 21 4 chr17 44986543 44986601 -40451879 + MIR SINE MIR 69 126 -82 1946 142 21 7 chr17 44986743 44987023 -40451457 + AluJb SINE Alu 1 287 -25 210 91 0 0 chr17 44987023 44987056 -40451424 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 206 213 0 0 chr17 44987147 44987194 -40451286 + (CTGGGG)n Simple_repeat Simple_repeat 6 52 0 895 241 151 12 chr17 44987500 44987845 -40450635 - L1ME4a LINE L1 -207 5914 5522 229 250 40 40 chr17 44987987 44988063 -40450417 + L2 LINE L2 3196 3271 -1 1053 270 0 0 chr17 44989223 44989471 -40449009 - MIR SINE MIR -10 252 5 409 307 39 65 chr17 44990038 44990269 -40448211 - MIR SINE MIR -17 245 21 297 0 0 0 chr17 44990716 44990749 -40447731 + (TG)n Simple_repeat Simple_repeat 2 34 0 286 116 0 0 chr17 44990989 44991032 -40447448 + Alu SINE Alu 1 43 -259 992 135 65 49 chr17 44991032 44991217 -40447263 + AluSg/x SINE Alu 110 297 -15 186 315 0 0 chr17 44991434 44991488 -40446992 - L3b LINE CR1 -197 1386 1333 440 248 29 29 chr17 44991518 44991655 -40446825 + Charlie8 DNA MER1_type 74 210 -2207 265 277 59 50 chr17 44992783 44992902 -40445578 + MIR SINE MIR 73 192 -70 1932 130 3 21 chr17 44993300 44993607 -40444873 - AluJo SINE Alu 0 306 5 233 237 51 0 chr17 44994087 44994146 -40444334 - MLT1A1 LTR MaLR -21 344 283 2371 108 0 13 chr17 44994146 44994461 -40444019 - AluSx SINE Alu -1 311 1 595 85 0 0 chr17 44994464 44994546 -40443934 + MSTA LTR MaLR 347 428 0 468 271 119 14 chr17 44994686 44994896 -40443584 - MIR SINE MIR -29 233 2 2336 99 10 3 chr17 44995163 44995466 -40443014 + AluSx SINE Alu 1 305 -7 375 212 40 10 chr17 44996356 44996455 -40442025 + MIR SINE MIR 42 143 -65 533 137 44 17 chr17 44997643 44997996 -40440484 + (CA)n Simple_repeat Simple_repeat 1 362 0 1880 163 23 7 chr17 44998221 44998521 -40439959 + AluJb SINE Alu 1 305 -7 23 0 0 0 chr17 44999076 44999099 -40439381 + AT_rich Low_complexity Low_complexity 1 23 0 2117 87 51 42 chr17 44999830 45000165 -40438315 + THE1B LTR MaLR 27 364 0 514 124 52 10 chr17 45000426 45000523 -40437957 + MER53 DNA DNA 17 117 -72 1905 219 74 19 chr17 45000524 45000998 -40437482 - MLT1D LTR MaLR 0 505 6 309 206 14 0 chr17 45001002 45001075 -40437405 - MER53 DNA DNA -115 74 1 2168 128 0 10 chr17 45001445 45001758 -40436722 - AluJo SINE Alu -2 310 1 677 155 9 0 chr17 45001761 45001877 -40436603 - FLAM_A SINE Alu -15 127 11 324 322 0 0 chr17 45001932 45002019 -40436461 - L2 LINE L2 0 3272 3186 180 0 0 0 chr17 45002550 45002570 -40435910 + (T)n Simple_repeat Simple_repeat 1 20 0 278 291 24 124 chr17 45002785 45002999 -40435481 + MIR SINE MIR 15 211 -51 291 182 143 0 chr17 45004342 45004419 -40434061 + MIR SINE MIR 110 197 -65 184 309 136 0 chr17 45004708 45004789 -40433691 - L2 LINE L2 -35 3237 3146 206 379 40 32 chr17 45006454 45006578 -40431902 - MIR SINE MIR -96 166 42 22 0 0 0 chr17 45006667 45006689 -40431791 + AT_rich Low_complexity Low_complexity 1 22 0 439 323 31 0 chr17 45007063 45007289 -40431191 - L1ME4a LINE L1 -219 5902 5670 1816 101 101 0 chr17 45007290 45007557 -40430923 - AluSq SINE Alu -19 294 1 1279 144 31 0 chr17 45007766 45007961 -40430519 + L1MC1 LINE L1 6127 6327 -6 2087 128 0 0 chr17 45008006 45008302 -40430178 - AluSx SINE Alu -16 296 1 1986 149 0 3 chr17 45008332 45008640 -40429840 - AluJb SINE Alu 0 312 6 402 318 139 40 chr17 45008657 45008959 -40429521 - L1ME4a LINE L1 -816 5330 4999 259 307 55 28 chr17 45009154 45009372 -40429108 - L1ME4a LINE L1 -1444 4702 4479 6762 39 0 4 chr17 45009674 45010481 -40427999 + L1PA5 LINE L1 5345 6149 0 477 0 0 0 chr17 45010481 45010534 -40427946 + (TA)n Simple_repeat Simple_repeat 2 54 0 2214 119 3 0 chr17 45011047 45011357 -40427123 + AluSx SINE Alu 1 311 -1 2405 63 0 16 chr17 45012068 45012384 -40426096 - AluY SINE Alu 0 311 1 1820 139 0 24 chr17 45012424 45012718 -40425762 - AluJo SINE Alu 0 312 26 1308 190 29 7 chr17 45012722 45013001 -40425479 - MER58B DNA MER1_type 0 341 57 298 256 226 23 chr17 45013995 45014048 -40424432 - MIR SINE MIR -50 212 171 279 0 0 0 chr17 45014048 45014079 -40424401 + (CAT)n Simple_repeat Simple_repeat 3 33 0 298 256 226 23 chr17 45014079 45014158 -40424322 - MIR SINE MIR -91 171 53 1197 140 0 6 chr17 45014402 45014580 -40423900 - AluJo SINE Alu -135 177 1 292 0 0 0 chr17 45015033 45015068 -40423412 - U2 snRNA snRNA -153 35 1 258 156 0 0 chr17 45015148 45015193 -40423287 + CT-rich Low_complexity Low_complexity 1 45 0 1337 242 109 0 chr17 45015705 45016090 -40422390 - L1MB5 LINE L1 -2 6172 5746 1954 119 25 0 chr17 45016120 45016425 -40422055 + AluSx SINE Alu 1 312 0 492 299 152 5 chr17 45017387 45017611 -40420869 - MIR SINE MIR -2 260 4 407 168 158 0 chr17 45017992 45018087 -40420393 + L1MB7 LINE L1 6075 6184 0 658 212 100 6 chr17 45018304 45018474 -40420006 - MIR SINE MIR -44 218 33 2109 127 7 0 chr17 45018778 45019086 -40419394 + AluSx SINE Alu 1 310 -2 320 370 8 8 chr17 45019099 45019218 -40419262 + HAL1b LINE L1 1226 1344 -4 2230 102 6 13 chr17 45019395 45019709 -40418771 + AluSx SINE Alu 1 312 0 216 0 0 0 chr17 45020441 45020465 -40418015 + (TA)n Simple_repeat Simple_repeat 2 25 0 2159 112 10 0 chr17 45020465 45020761 -40417719 - AluSx SINE Alu -13 299 1 2194 118 0 0 chr17 45021245 45021550 -40416930 - AluSx SINE Alu -7 305 1 255 196 128 69 chr17 45021764 45021866 -40416614 - MIR SINE MIR -26 236 129 264 297 95 27 chr17 45022010 45022158 -40416322 - MIR SINE MIR -84 178 21 445 268 42 14 chr17 45022789 45022931 -40415549 + MIR SINE MIR 35 180 -82 1933 163 0 3 chr17 45023727 45024021 -40414459 + AluSx SINE Alu 2 294 -18 514 250 228 6 chr17 45024119 45024299 -40414181 + MIR SINE MIR 8 227 -35 442 330 96 25 chr17 45024794 45025033 -40413447 + L1ME4a LINE L1 5864 6119 -2 702 72 0 0 chr17 45025325 45025422 -40413058 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 349 278 9 17 chr17 45025527 45025642 -40412838 + (TG)n Simple_repeat Simple_repeat 1 114 0 393 278 199 0 chr17 45025839 45026015 -40412465 - MIR SINE MIR -9 253 43 336 134 247 21 chr17 45026017 45026114 -40412366 - L2 LINE L2 -4 3309 3191 376 311 61 0 chr17 45026440 45026572 -40411908 + MER5B DNA MER1_type 38 177 -1 279 79 0 0 chr17 45027962 45028000 -40410480 + (TTCA)n Simple_repeat Simple_repeat 2 39 0 351 346 23 15 chr17 45028001 45028134 -40410346 - L2 LINE L2 -9 3304 3171 674 333 58 0 chr17 45028406 45028649 -40409831 - MIR SINE MIR -4 258 2 220 323 151 21 chr17 45028784 45028949 -40409531 - MIR SINE MIR -63 145 7 335 315 105 11 chr17 45029423 45029604 -40408876 + MIR3 SINE MIR 10 207 -1 416 254 61 33 chr17 45032085 45032255 -40406225 + MIR3 SINE MIR 11 187 -21 918 171 78 5 chr17 45033250 45033467 -40405013 - MLT1C LTR MaLR -222 245 13 1957 145 3 7 chr17 45033523 45033827 -40404653 - AluSx SINE Alu -9 303 1 2133 112 0 14 chr17 45033855 45034151 -40404329 - AluSx SINE Alu -17 295 4 2748 172 36 74 chr17 45034831 45035546 -40402934 + L1MB5 LINE L1 5451 6138 -36 2197 99 0 10 chr17 45035554 45035846 -40402634 - AluSq SINE Alu -22 291 3 594 281 111 9 chr17 45037283 45037500 -40400980 + MIR SINE MIR 9 247 -15 627 69 0 20 chr17 45038098 45038199 -40400281 - MER9 LTR ERVK -49 462 364 216 0 0 0 chr17 45038201 45038225 -40400255 + (A)n Simple_repeat Simple_repeat 1 24 0 228 289 0 0 chr17 45039137 45039189 -40399291 + L2 LINE L2 3207 3258 -14 506 236 236 8 chr17 45039911 45040157 -40398323 + LTR16C LTR ERVL 32 333 -158 427 231 71 132 chr17 45042151 45042333 -40396147 + MER91B DNA MER1_type 3 173 -17 187 234 104 39 chr17 45043501 45043578 -40394902 + MER5A DNA MER1_type 28 109 -80 213 287 82 46 chr17 45043638 45043767 -40394713 + MIR SINE MIR 3 143 -65 430 273 22 7 chr17 45044206 45044345 -40394135 - Charlie8 DNA MER1_type -2270 147 7 1839 85 3 57 chr17 45044456 45044739 -40393741 - AluSx SINE Alu -8 304 37 975 203 11 6 chr17 45045004 45045181 -40393299 + MER5B DNA MER1_type 1 178 0 274 256 39 13 chr17 45045236 45045314 -40393166 - L3 LINE CR1 -4 1573 1494 773 197 162 10 chr17 45045331 45045529 -40392951 - MIR SINE MIR -2 260 33 217 363 20 48 chr17 45045596 45045742 -40392738 - MIR3 SINE MIR -22 186 45 247 194 222 37 chr17 45046705 45046813 -40391667 - MIR3 SINE MIR -70 138 11 290 383 23 8 chr17 45049499 45049627 -40388853 - MIR SINE MIR -13 249 120 1982 104 0 49 chr17 45049712 45050020 -40388460 - AluSx SINE Alu -19 293 1 237 267 29 67 chr17 45050953 45051058 -40387422 + MER5A DNA MER1_type 5 105 -84 1323 111 0 0 chr17 45053121 45053310 -40385170 + AluSc SINE Alu 114 302 -7 365 275 0 0 chr17 45053324 45053404 -40385076 + MIR3 SINE MIR 81 160 -48 483 88 15 0 chr17 45053534 45053602 -40384878 - Alu SINE Alu -241 69 1 1683 72 25 17 chr17 45053606 45053843 -40384637 - AluSq SINE Alu -20 293 55 687 284 113 6 chr17 45054117 45054462 -40384018 + L1MC4a LINE L1 5650 6031 -1777 315 310 155 0 chr17 45056397 45056526 -40381954 + MIR3 SINE MIR 34 182 -26 673 286 82 16 chr17 45057047 45057292 -40381188 + MIR SINE MIR 2 262 0 418 326 57 29 chr17 45057874 45058049 -40380431 - MIR3 SINE MIR -3 205 26 320 255 50 10 chr17 45058459 45058567 -40379913 + MIR SINE MIR 51 154 -63 359 319 83 18 chr17 45058882 45059051 -40379429 - MIR3 SINE MIR -8 200 21 203 376 35 56 chr17 45059379 45059576 -40378904 + MIR SINE MIR 36 228 -34 * 400 345 88 6 chr17 45059568 45059739 -40378741 + MIR SINE MIR 38 222 -40 513 242 6 68 chr17 45060655 45060816 -40377664 + MIR3 SINE MIR 10 160 -48 584 305 84 5 chr17 45061887 45062090 -40376390 - MIR SINE MIR -43 219 1 241 229 164 0 chr17 45062140 45062201 -40376279 - MIR SINE MIR -9 253 183 258 281 85 12 chr17 45062663 45062745 -40375735 - MIR SINE MIR -101 161 74 226 254 0 60 chr17 45063531 45063598 -40374882 - MIR SINE MIR -12 250 188 236 362 0 21 chr17 45063641 45063782 -40374698 + GA-rich Low_complexity Low_complexity 4 141 0 1520 116 4 23 chr17 45064166 45064424 -40374056 - MER2 DNA MER2_type -92 253 1 932 271 168 3 chr17 45064425 45064765 -40373715 - L2 LINE L2 -18 3295 2900 223 258 0 32 chr17 45065675 45065737 -40372743 + L2 LINE L2 3224 3283 -30 613 306 63 36 chr17 45065857 45066096 -40372384 + MIR SINE MIR 4 253 -9 2136 80 0 17 chr17 45066096 45066406 -40372074 - AluSx SINE Alu 0 305 1 613 306 63 36 chr17 45066406 45066417 -40372063 + MIR SINE MIR 253 262 0 489 114 43 0 chr17 45067473 45067543 -40370937 + FRAM SINE Alu 42 114 -62 1020 185 31 15 chr17 45067543 45067738 -40370742 + AluJo SINE Alu 85 282 -30 360 0 0 0 chr17 45067740 45067780 -40370700 + (CAAAC)n Simple_repeat Simple_repeat 2 41 0 184 277 53 53 chr17 45067834 45067928 -40370552 - MIR SINE MIR -66 196 103 188 308 31 15 chr17 45068269 45068334 -40370146 + L2 LINE L2 3247 3312 -1 404 283 117 39 chr17 45068449 45068629 -40369851 + MIR SINE MIR 18 211 -51 547 258 201 0 chr17 45068702 45068896 -40369584 + MIR SINE MIR 8 240 -22 387 284 63 0 chr17 45069025 45069152 -40369328 - MER117 DNA MER1_type 0 197 63 1585 78 0 5 chr17 45119658 45119863 -40318617 - AluSq SINE Alu -109 204 1 371 227 63 34 chr17 45119940 45119975 -40318505 - MIR3 SINE MIR -1 207 174 1082 165 82 5 chr17 45119975 45120181 -40318299 + MER58A DNA MER1_type 3 224 0 371 227 63 34 chr17 45120181 45120287 -40318193 - MIR3 SINE MIR -34 174 65 2040 108 0 7 chr17 45120516 45120841 -40317639 + AluSx SINE Alu 1 323 0 241 211 57 65 chr17 45120917 45121040 -40317440 + L1MC/D LINE L1 5604 5725 -2083 607 194 43 0 chr17 45121509 45121648 -40316832 - L1M4 LINE L1 -3558 2588 2444 697 168 67 96 chr17 45122558 45122701 -40315779 + MER3 DNA MER1_type 8 145 -64 1238 219 14 24 chr17 45122701 45122998 -40315482 - AluJo SINE Alu -18 294 1 697 168 67 96 chr17 45122998 45123062 -40315418 + MER3 DNA MER1_type 145 209 0 1327 237 60 32 chr17 45123258 45123745 -40314735 + L1M4 LINE L1 2399 2875 -3271 4795 51 12 0 chr17 45123959 45124543 -40313937 + LTR10C LTR ERV1 1 591 0 572 113 19 5 chr17 45124652 45124853 -40313627 + AluSx SINE Alu 2 305 0 2362 173 61 38 chr17 45124853 45125036 -40313444 + L1MB7 LINE L1 5599 5776 -408 629 163 7 67 chr17 45125036 45125171 -40313309 + FLAM_A SINE Alu 2 128 -5 2362 173 61 38 chr17 45125171 45125560 -40312920 + L1MB7 LINE L1 5776 6184 0 2131 108 0 3 chr17 45125885 45126181 -40312299 + AluSg SINE Alu 1 295 -15 373 202 61 0 chr17 45127419 45127518 -40310962 - MIR3 SINE MIR -14 194 90 245 196 20 0 chr17 45127623 45127674 -40310806 + (TGGA)n Simple_repeat Simple_repeat 4 55 0 236 325 25 50 chr17 45127767 45127887 -40310593 + L3 LINE CR1 272 388 -1189 1351 151 88 54 chr17 45128414 45128766 -40309714 - Charlie5 DNA MER1_type 0 2623 2260 1582 151 0 0 chr17 45128768 45129019 -40309461 - AluJo SINE Alu -12 300 50 401 254 51 0 chr17 45129069 45129187 -40309293 - Charlie5 DNA MER1_type -2485 127 4 213 267 0 78 chr17 45129200 45129316 -40309164 + G-rich Low_complexity Low_complexity 6 112 0 214 329 0 28 chr17 45129872 45130015 -40308465 + C-rich Low_complexity Low_complexity 4 142 0 780 246 183 52 chr17 45130377 45130857 -40307623 - MLT1G1 LTR MaLR -1 594 52 475 302 87 14 chr17 45132430 45132643 -40305837 + MIR SINE MIR 29 262 0 354 272 130 24 chr17 45132797 45132966 -40305514 - MIR SINE MIR -29 233 47 368 272 163 38 chr17 45134668 45134852 -40303628 + MIR SINE MIR 2 208 -54 274 256 336 15 chr17 45135576 45135713 -40302767 + MER5A DNA MER1_type 9 189 0 256 280 136 25 chr17 45135720 45135838 -40302642 + L2 LINE L2 3173 3303 -10 1528 175 56 7 chr17 45135838 45136123 -40302357 + AluJo SINE Alu 1 299 -13 2104 104 0 43 chr17 45136220 45136546 -40301934 - AluSx SINE Alu 0 312 1 334 242 70 23 chr17 45137177 45137305 -40301175 - MIR3 SINE MIR -61 147 14 234 140 175 18 chr17 45137339 45137396 -40301084 + L2 LINE L2 3247 3312 -1 364 336 9 0 chr17 45137460 45137576 -40300904 - MIR SINE MIR -43 219 103 573 315 98 7 chr17 45137884 45138160 -40300320 + L2 LINE L2 3012 3312 -1 1807 133 7 0 chr17 45138286 45138564 -40299916 - AluSx SINE Alu 0 312 33 1532 141 52 19 chr17 45138666 45138935 -40299545 + AluJb SINE Alu 33 310 -2 332 301 22 44 chr17 45138962 45139098 -40299382 - L2 LINE L2 -6 3266 3134 307 276 182 57 chr17 45139688 45139880 -40298600 + L3b LINE CR1 1171 1386 -197 2537 99 5 30 chr17 45139904 45140277 -40298203 + THE1B LTR MaLR 1 364 0 294 312 169 0 chr17 45140328 45140482 -40297998 - MIR3 SINE MIR -13 195 16 574 273 107 5 chr17 45140553 45140768 -40297712 - MIR SINE MIR -15 247 7 695 205 141 0 chr17 45140970 45141126 -40297354 + MER45A DNA AcHobo 1 178 0 207 100 0 0 chr17 45141324 45141354 -40297126 + (TC)n Simple_repeat Simple_repeat 1 30 0 466 241 28 0 chr17 45142115 45142223 -40296257 - MIR SINE MIR -96 166 56 419 232 31 43 chr17 45142829 45142984 -40295496 - MER5A DNA MER1_type -16 164 7 291 319 83 42 chr17 45142990 45143134 -40295346 - MIR3 SINE MIR -47 161 12 1293 182 45 64 chr17 45143959 45144289 -40294191 + L1ME LINE L1 5483 5806 -360 1791 217 38 30 chr17 45144324 45144849 -40293631 + L1M4 LINE L1 3890 4418 -1728 295 246 43 101 chr17 45144963 45145170 -40293310 - L1 LINE L1 -2191 3955 3761 2274 80 0 3 chr17 45145171 45145472 -40293008 - AluSq SINE Alu -13 300 1 2021 190 58 61 chr17 45145523 45145886 -40292594 - L1ME1 LINE L1 -297 6263 5900 2291 56 26 3 chr17 45145886 45146190 -40292290 - AluY SINE Alu 0 311 1 2021 190 58 61 chr17 45146190 45146356 -40292124 - L1ME1 LINE L1 -660 5900 5735 1780 161 3 7 chr17 45146356 45146655 -40291825 - AluJo SINE Alu -14 298 1 2021 190 58 61 chr17 45146655 45146734 -40291746 - L1ME1 LINE L1 -825 5735 5657 2316 54 7 0 chr17 45146734 45147028 -40291452 - AluY SINE Alu -15 296 1 1411 172 7 55 chr17 45147030 45147338 -40291142 - AluJb SINE Alu -19 293 1 2021 190 58 61 chr17 45147338 45147562 -40290918 - L1ME1 LINE L1 -904 5656 5467 845 138 174 10 chr17 45147570 45147765 -40290715 - MER58B DNA MER1_type -10 331 105 2518 136 38 71 chr17 45147902 45148424 -40290056 - L1MA4 LINE L1 -27 6273 5769 704 183 8 23 chr17 45148430 45148561 -40289919 - FLAM_C SINE Alu 0 133 5 2081 129 0 0 chr17 45148570 45148872 -40289608 - AluSx SINE Alu -10 302 1 1972 233 39 33 chr17 45148895 45149506 -40288974 - L1ME1 LINE L1 -3170 3370 2764 1965 136 3 0 chr17 45149506 45149807 -40288673 + AluSx SINE Alu 1 302 -10 1936 149 0 0 chr17 45149815 45150111 -40288369 + AluSx SINE Alu 1 296 -16 1972 233 39 33 chr17 45150111 45150129 -40288351 - L1ME1 LINE L1 -3782 2758 2728 777 171 0 0 chr17 45150253 45150370 -40288110 - FLAM_C SINE Alu -25 118 2 562 215 112 37 chr17 45150372 45150766 -40287714 - L1ME1 LINE L1 -3964 2576 2223 198 103 0 0 chr17 45150766 45150795 -40287685 + (TG)n Simple_repeat Simple_repeat 2 30 0 360 291 27 0 chr17 45150795 45150943 -40287537 + (TA)n Simple_repeat Simple_repeat 2 153 0 2175 98 0 0 chr17 45151120 45151405 -40287075 - AluSc SINE Alu -24 285 1 278 307 13 0 chr17 45151408 45151483 -40286997 + L2 LINE L2 2221 2296 -1018 824 214 90 62 chr17 45151701 45152056 -40286424 + L1MDa LINE L1 1837 2201 -4339 388 250 17 17 chr17 45152079 45152195 -40286285 + MIR SINE MIR 131 246 -16 2031 109 10 0 chr17 45152195 45152488 -40285992 + AluSx SINE Alu 1 296 -16 191 344 87 46 chr17 45152709 45152904 -40285576 - L2 LINE L2 -78 3194 2992 377 234 131 36 chr17 45153511 45153648 -40284832 - MER5B DNA MER1_type 0 178 29 297 260 230 0 chr17 45153694 45153794 -40284686 - MER5A DNA MER1_type -6 183 61 331 138 154 0 chr17 45153984 45154049 -40284431 + MER5A DNA MER1_type 2 76 -113 1113 96 0 19 chr17 45154049 45154205 -40284275 + AluSq SINE Alu 1 153 -160 656 165 70 0 chr17 45154217 45154332 -40284148 - FLAM_A SINE Alu -10 123 1 1935 115 17 7 chr17 45154341 45154628 -40283852 - AluSx SINE Alu -22 290 1 1976 119 31 0 chr17 45155466 45155759 -40282721 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 45155879 45155900 -40282580 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 2338 57 0 3 chr17 45156089 45156386 -40282094 + AluY SINE Alu 2 297 -14 313 290 52 58 chr17 45156476 45156631 -40281849 - L2 LINE L2 0 3313 3160 220 162 0 27 chr17 45158001 45158075 -40280405 + (TTAA)n Simple_repeat Simple_repeat 1 72 0 2349 78 0 0 chr17 45158075 45158358 -40280122 - AluSc SINE Alu -26 283 1 313 71 0 0 chr17 45158479 45158521 -40279959 + 5S rRNA rRNA 1 42 -79 1664 190 20 0 chr17 45158583 45158878 -40279602 - AluJo SINE Alu -1 311 11 2166 137 0 0 chr17 45158928 45159227 -40279253 - AluSg SINE Alu -11 299 1 1647 135 92 39 chr17 45159450 45159731 -40278749 - AluSx SINE Alu -16 296 1 1908 130 36 0 chr17 45159733 45160010 -40278470 - AluSx SINE Alu -25 287 1 344 270 93 93 chr17 45160741 45161000 -40277480 + MIR SINE MIR 4 262 0 4648 175 56 35 chr17 45161182 45161452 -40277028 + L1MD1 LINE L1 4398 4661 -1581 2351 154 58 10 chr17 45161452 45161862 -40276618 - MSTB1 LTR MaLR 0 432 3 4648 175 56 35 chr17 45161862 45162990 -40275490 + L1MD1 LINE L1 4661 5838 -404 1878 164 61 17 chr17 45162990 45163349 -40275131 + THE1C LTR MaLR 1 375 0 4648 175 56 35 chr17 45163349 45163681 -40274799 + L1MD1 LINE L1 5838 6162 -80 2498 108 16 24 chr17 45164401 45164779 -40273701 - THE1C LTR MaLR 0 375 1 263 239 55 73 chr17 45164894 45165003 -40273477 + MLT1K LTR MaLR 143 249 -339 436 293 48 8 chr17 45165516 45165669 -40272811 - MIR3 SINE MIR -65 143 6 459 242 105 0 chr17 45165862 45165986 -40272494 + MIR SINE MIR 82 218 -44 205 200 0 0 chr17 45166143 45166183 -40272297 + T-rich Low_complexity Low_complexity 1 40 0 1420 182 29 118 chr17 45167088 45167249 -40271231 + LTR8A LTR ERV1 1 175 -552 2129 155 0 0 chr17 45167249 45167552 -40270928 + AluSx SINE Alu 1 303 -9 1420 182 29 118 chr17 45167552 45168139 -40270341 + LTR8A LTR ERV1 175 715 -12 2227 179 59 12 chr17 45168211 45168620 -40269860 + MSTA LTR MaLR 1 428 0 380 300 23 46 chr17 45168891 45169021 -40269459 + MIR3 SINE MIR 8 134 -74 656 24 0 12 chr17 45169168 45169251 -40269229 + (TTCC)n Simple_repeat Simple_repeat 2 83 0 492 263 120 78 chr17 45169308 45169525 -40268955 - MLT1I LTR MaLR 0 409 184 * 1191 268 28 32 chr17 45169518 45169918 -40268562 - LTR16C LTR ERVL -25 466 69 538 258 37 18 chr17 45169958 45170121 -40268359 - MLT1I LTR MaLR -218 191 26 301 212 165 0 chr17 45170460 45170545 -40267935 - MIR SINE MIR -66 196 98 214 167 148 0 chr17 45170537 45170591 -40267889 + MIR SINE MIR 76 137 -71 * 255 217 48 48 chr17 45170630 45170713 -40267767 - MIR SINE MIR -107 101 19 752 271 142 27 chr17 45171433 45171888 -40266592 - L2 LINE L2 0 3313 2797 579 287 83 74 chr17 45171888 45172323 -40266157 - MLT1J2 LTR MaLR -7 443 5 290 309 49 12 chr17 45172323 45172485 -40265995 - L2 LINE L2 -505 2809 2642 * 349 287 20 10 chr17 45172474 45172575 -40265905 - MIR SINE MIR -151 111 10 1717 119 70 98 chr17 45172698 45173084 -40265396 - THE1C LTR MaLR 0 375 1 1851 264 85 50 chr17 45174173 45174731 -40263749 + L1MEd LINE L1 38 634 -5485 2103 131 7 10 chr17 45174731 45175029 -40263451 - AluSx SINE Alu -15 297 1 1851 264 85 50 chr17 45175029 45175268 -40263212 + L1MEd LINE L1 634 863 -5256 303 344 48 38 chr17 45175268 45175454 -40263026 - MIR SINE MIR -51 211 24 402 313 77 11 chr17 45175851 45176033 -40262447 + MLT1J LTR MaLR 6 199 -312 1752 202 17 22 chr17 45176042 45176404 -40262076 + MLT1A1 LTR MaLR 6 365 0 309 275 112 34 chr17 45176443 45176621 -40261859 + MLT1J2 LTR MaLR 259 450 0 2006 148 7 3 chr17 45176793 45177097 -40261383 - AluJo SINE Alu -7 305 1 361 262 19 9 chr17 45177661 45177768 -40260712 - MIR3 SINE MIR -3 205 98 1387 173 105 68 chr17 45178102 45178440 -40260040 + LTR54B LTR ERV1 1 360 -138 1848 173 0 28 chr17 45178440 45178758 -40259722 + AluJo SINE Alu 1 309 -3 1387 173 105 68 chr17 45178758 45178858 -40259622 + LTR54B LTR ERV1 360 455 -43 217 226 48 48 chr17 45179988 45180050 -40258430 - MIR3 SINE MIR -19 189 128 183 129 0 0 chr17 45180199 45180230 -40258250 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 21 36 0 0 chr17 45180784 45180812 -40257668 + AT_rich Low_complexity Low_complexity 1 28 0 1014 103 0 28 chr17 45181375 45181520 -40256960 + L1PA8A LINE L1 5991 6131 0 1897 122 4 18 chr17 45181677 45181955 -40256525 + AluSx SINE Alu 1 274 -38 243 351 112 8 chr17 45182124 45182258 -40256222 - L2 LINE L2 -4 3268 3121 2208 111 3 20 chr17 45182293 45182599 -40255881 + AluSp SINE Alu 1 301 -12 2281 99 7 0 chr17 45182895 45183187 -40255293 + AluSg SINE Alu 3 296 -14 234 0 0 0 chr17 45183706 45183732 -40254748 + (CGGGG)n Simple_repeat Simple_repeat 3 28 0 22 88 0 0 chr17 45184893 45184950 -40253530 + GC_rich Low_complexity Low_complexity 1 57 0 451 304 125 42 chr17 45186734 45187046 -40251434 + L1MC4a LINE L1 4611 4948 -1198 2200 136 3 0 chr17 45187500 45187801 -40250679 + AluJb SINE Alu 6 307 -5 306 167 0 0 chr17 45187819 45187879 -40250601 + GA-rich Low_complexity Low_complexity 3 62 0 772 239 220 43 chr17 45187879 45188301 -40250179 + L1MC4a LINE L1 5318 5408 -748 1914 146 0 17 chr17 45188301 45188432 -40250048 + AluJb SINE Alu 1 133 -169 1098 104 0 0 chr17 45188432 45188595 -40249885 + (TA)n Simple_repeat Simple_repeat 2 164 0 1914 146 0 17 chr17 45188595 45188770 -40249710 + AluJb SINE Alu 133 302 0 772 239 220 43 chr17 45188770 45188838 -40249642 + L1MC4a LINE L1 5408 5463 -693 2143 94 22 0 chr17 45189216 45189525 -40248955 + AluSx SINE Alu 1 315 0 405 296 19 9 chr17 45190155 45190263 -40248217 + MER5A DNA MER1_type 59 167 -22 269 260 27 0 chr17 45190317 45190390 -40248090 - MIR SINE MIR -72 136 62 275 315 20 55 chr17 45190573 45190719 -40247761 - MIR SINE MIR -11 251 111 2131 155 64 0 chr17 45190852 45191227 -40247253 + MSTB LTR MaLR 1 399 -27 246 146 0 0 chr17 45191301 45191342 -40247138 + MSTB LTR MaLR 386 426 0 482 233 42 17 chr17 45191420 45191540 -40246940 + MIR SINE MIR 55 177 -85 596 314 24 19 chr17 45191564 45191774 -40246706 - MIR SINE MIR 0 262 52 5173 133 20 33 chr17 45191791 45192732 -40245748 - L1MA8 LINE L1 0 6291 5362 1705 187 17 3 chr17 45192732 45193031 -40245449 - AluJb SINE Alu -9 303 1 5173 133 20 33 chr17 45193031 45193050 -40245430 - L1MA8 LINE L1 -929 5362 5344 309 274 44 35 chr17 45193879 45193992 -40244488 - MIR SINE MIR -96 166 53 208 167 0 130 chr17 45194086 45194140 -40244340 - MIR SINE MIR -63 145 99 418 300 44 31 chr17 45195712 45195872 -40242608 + MIR SINE MIR 46 207 -55 320 290 138 14 chr17 45196910 45196966 -40241514 - MIR3 SINE MIR -48 160 88 214 355 78 14 chr17 45196966 45197107 -40241373 + MIR SINE MIR 1 150 -112 339 300 161 0 chr17 45197797 45197927 -40240553 + MIR3 SINE MIR 37 187 -21 276 273 17 85 chr17 45199279 45199455 -40239025 - MIR3 SINE MIR -41 167 4 1447 230 25 35 chr17 45199517 45199921 -40238559 - L2 LINE L2 0 3313 2914 276 293 73 32 chr17 45202139 45202262 -40236218 - MIR3 SINE MIR -8 200 73 1072 251 78 75 chr17 45204383 45204794 -40233686 - LTR16A LTR ERVL -7 443 32 693 243 136 14 chr17 45206161 45206375 -40232105 - MIR SINE MIR -20 242 3 398 315 55 42 chr17 45206428 45206593 -40231887 + MIR SINE MIR 41 207 -55 2162 131 0 49 chr17 45206775 45207103 -40231377 + AluSx SINE Alu 1 312 0 201 108 0 54 chr17 45207103 45207140 -40231340 + (GGAGA)n Simple_repeat Simple_repeat 4 38 0 182 191 21 0 chr17 45207160 45207207 -40231273 + CT-rich Low_complexity Low_complexity 4 51 0 201 363 45 40 chr17 45207317 45207540 -40230940 + L2 LINE L2 2657 2880 -434 190 156 0 0 chr17 45207596 45207628 -40230852 + MIR SINE MIR 219 250 -12 182 118 29 0 chr17 45208320 45208354 -40230126 + GA-rich Low_complexity Low_complexity 3 37 0 858 243 67 67 chr17 45208621 45209025 -40229455 + MLT1J LTR MaLR 14 417 -94 276 102 34 17 chr17 45209037 45209096 -40229384 + CT-rich Low_complexity Low_complexity 5 64 0 1272 162 5 24 chr17 45209096 45209306 -40229174 - AluJo SINE Alu -20 292 87 579 209 43 124 chr17 45209906 45210140 -40228340 + MER58C DNA MER1_type 1 215 0 368 278 203 0 chr17 45210684 45210817 -40227663 + MIR SINE MIR 13 172 -90 470 254 17 8 chr17 45211493 45211611 -40226869 + MIR SINE MIR 20 138 -124 3954 158 18 38 chr17 45211617 45211677 -40226803 + L1MB7 LINE L1 5429 5489 -695 1944 145 91 0 chr17 45211677 45212008 -40226472 - MER46B DNA MER2_type 0 236 1 3954 158 18 38 chr17 45212008 45212713 -40225767 + L1MB7 LINE L1 5489 6179 -5 2264 127 0 9 chr17 45212830 45213145 -40225335 + AluSx SINE Alu 1 312 0 1059 250 20 16 chr17 45213609 45213861 -40224619 - MIR SINE MIR -2 260 8 455 251 37 70 chr17 45213948 45214135 -40224345 - MER5A DNA MER1_type -1 188 8 711 181 50 44 chr17 45214769 45214951 -40223529 + MER20 DNA MER1_type 37 219 0 272 239 222 17 chr17 45216906 45217023 -40221457 - MIR3 SINE MIR -1 207 67 224 263 40 13 chr17 45217291 45217367 -40221113 - L2 LINE L2 -2 3270 3193 226 185 0 74 chr17 45217437 45217491 -40220989 - L2 LINE L2 -200 3072 3023 197 272 0 86 chr17 45217620 45217701 -40220779 + MIR SINE MIR 53 126 -82 285 133 0 0 chr17 45217907 45217952 -40220528 + MIR SINE MIR 109 153 -55 1090 243 61 9 chr17 45218612 45219068 -40219412 + L1ME4a LINE L1 5620 6118 -3 2185 103 6 50 chr17 45219210 45219529 -40218951 - AluSg SINE Alu -5 305 1 1654 199 6 22 chr17 45220454 45220770 -40217710 + AluJo SINE Alu 1 311 -1 2471 40 3 3 chr17 45220923 45221223 -40217257 + L1PA4 LINE L1 5853 6152 -3 434 309 115 36 chr17 45221692 45222021 -40216459 + Tigger8 DNA MER2_type 25 327 -339 1847 163 13 7 chr17 45222021 45222305 -40216175 + AluSx SINE Alu 1 289 -23 198 0 0 0 chr17 45222305 45222327 -40216153 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1847 163 13 7 chr17 45222327 45222348 -40216132 + AluSx SINE Alu 289 308 -4 434 309 115 36 chr17 45222348 45222422 -40216058 + Tigger8 DNA MER2_type 327 394 -272 1696 140 34 27 chr17 45222422 45222714 -40215766 - AluJo SINE Alu -18 294 1 434 309 115 36 chr17 45222714 45222840 -40215640 + Tigger8 DNA MER2_type 394 597 -69 615 240 202 0 chr17 45222840 45223048 -40215432 - MIR SINE MIR -10 252 3 2294 105 0 3 chr17 45223138 45223443 -40215037 + AluSg SINE Alu 1 304 -6 1694 187 9 25 chr17 45225218 45225533 -40212947 - AluJo SINE Alu -2 310 1 480 277 32 26 chr17 45225978 45226133 -40212347 + MIR SINE MIR 2 157 -105 3020 187 36 6 chr17 45226279 45226829 -40211651 - MLT1F1 LTR MaLR 0 567 1 2099 98 65 0 chr17 45227328 45227604 -40210876 - AluSx SINE Alu -16 296 3 534 188 102 0 chr17 45228321 45228436 -40210044 + MIR SINE MIR 33 159 -63 2312 98 0 46 chr17 45228442 45228768 -40209712 + AluSp SINE Alu 3 313 0 924 227 21 0 chr17 45228800 45228994 -40209486 + MIR SINE MIR 21 218 -44 396 238 12 0 chr17 45228995 45229075 -40209405 - MER2 DNA MER2_type -264 81 1 578 279 68 0 chr17 45229643 45229790 -40208690 - MER5B DNA MER1_type -14 164 8 803 192 50 39 chr17 45229811 45229993 -40208487 - MER5A DNA MER1_type -3 186 3 963 202 84 10 chr17 45230007 45230210 -40208270 + MER58A DNA MER1_type 5 222 -2 300 212 219 27 chr17 45230220 45230366 -40208114 + MLT1J1 LTR MaLR 246 419 -27 366 233 226 0 chr17 45230390 45230523 -40207957 + MIR SINE MIR 57 219 -43 187 305 17 17 chr17 45231074 45231133 -40207347 - L2 LINE L2 -9 3263 3205 2408 93 10 0 chr17 45231224 45231525 -40206955 + AluSx SINE Alu 1 304 -8 189 107 0 0 chr17 45231538 45231566 -40206914 + (GGAGA)n Simple_repeat Simple_repeat 5 32 0 239 239 94 16 chr17 45231646 45231750 -40206730 + MER5B DNA MER1_type 31 165 -24 648 182 51 99 chr17 45231856 45231989 -40206491 + L1ME LINE L1 5100 5238 -928 4433 52 2 9 chr17 45231989 45232547 -40205933 + L1PA5 LINE L1 5601 6154 0 648 182 51 99 chr17 45232547 45232812 -40205668 + L1ME LINE L1 5238 5475 -691 489 254 55 0 chr17 45232813 45232923 -40205557 + MIR SINE MIR 60 175 -87 414 57 0 0 chr17 45233191 45233244 -40205236 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 890 136 0 0 chr17 45234111 45234236 -40204244 + FLAM_A SINE Alu 1 125 -8 1818 133 90 103 chr17 45234707 45234793 -40203687 + LTR12 LTR ERV1 4 90 -624 2563 55 0 0 chr17 45234793 45235086 -40203394 + AluY SINE Alu 1 293 -18 1818 133 90 103 chr17 45235086 45235486 -40202994 + LTR12 LTR ERV1 90 484 -230 593 218 158 6 chr17 45235820 45235985 -40202495 - MIR SINE MIR -9 253 64 189 0 0 0 chr17 45236886 45236907 -40201573 + (CAG)n Simple_repeat Simple_repeat 1 21 0 358 242 121 0 chr17 45237283 45237407 -40201073 - MER96 DNA MER1_type? 0 175 37 186 269 11 54 chr17 45237605 45237698 -40200782 + L2 LINE L2 2949 3037 -235 228 222 0 19 chr17 45238371 45238425 -40200055 + GA-rich Low_complexity Low_complexity 2 54 0 645 272 35 12 chr17 45240047 45240220 -40198260 - MIR SINE MIR -14 248 72 335 237 11 21 chr17 45240499 45240549 -40197931 + MIR3 SINE MIR 111 161 -47 513 315 11 28 chr17 45240549 45240730 -40197750 - MER5B DNA MER1_type 0 178 1 335 237 11 21 chr17 45240730 45240772 -40197708 + MIR3 SINE MIR 161 202 -6 497 135 0 0 chr17 45240782 45240856 -40197624 + MER58A DNA MER1_type 45 118 0 320 288 68 18 chr17 45241069 45241232 -40197248 - L3b LINE CR1 -310 1273 1103 516 129 97 0 chr17 45241624 45241717 -40196763 - L1MB8 LINE L1 -1 6177 6076 228 191 0 29 chr17 45241753 45241821 -40196659 + MLT1F LTR MaLR 464 529 -13 308 294 0 46 chr17 45241932 45242041 -40196439 - MIR SINE MIR -6 256 153 2439 170 36 42 chr17 45242207 45242358 -40196122 + LTR26B LTR ERV1 30 180 -351 2394 100 3 0 chr17 45242358 45242667 -40195813 - AluSq SINE Alu -3 310 1 2439 170 36 42 chr17 45242667 45242682 -40195798 + LTR26B LTR ERV1 180 194 -337 1854 156 52 13 chr17 45242682 45243066 -40195414 + L1MB8 LINE L1 5776 6174 -4 2439 170 36 42 chr17 45243066 45243403 -40195077 + LTR26B LTR ERV1 194 531 0 776 251 98 16 chr17 45243403 45243803 -40194677 - MLT1L LTR MaLR -134 481 10 467 279 23 23 chr17 45243814 45243943 -40194537 - MIR SINE MIR -111 151 23 199 218 91 0 chr17 45244354 45244409 -40194071 - L3 LINE CR1 -343 1234 1175 243 235 0 0 chr17 45245218 45245269 -40193211 - MIR SINE MIR -61 147 97 536 161 32 0 chr17 45245935 45246028 -40192452 + MER5A DNA MER1_type 4 99 -90 2287 109 3 6 chr17 45246197 45246510 -40191970 + AluSp SINE Alu 1 312 -1 3482 153 28 55 chr17 45246523 45246712 -40191768 + L1MB4 LINE L1 5486 5679 -501 2165 128 0 35 chr17 45246712 45247031 -40191449 + AluSq SINE Alu 1 308 -5 3482 153 28 55 chr17 45247031 45247492 -40190988 + L1MB4 LINE L1 5679 6118 -62 2203 132 3 0 chr17 45247492 45247803 -40190677 + AluSx SINE Alu 1 312 0 3482 153 28 55 chr17 45247803 45247857 -40190623 + L1MB4 LINE L1 6118 6172 -8 401 198 26 78 chr17 45248642 45248697 -40189783 + MIR3 SINE MIR 96 143 -65 2022 141 3 10 chr17 45248697 45249001 -40189479 + AluJo SINE Alu 1 302 -10 401 198 26 78 chr17 45249001 45249061 -40189419 + MIR3 SINE MIR 143 205 -3 257 195 58 81 chr17 45249197 45249284 -40189196 + MIR SINE MIR 178 262 0 1917 147 0 17 chr17 45250307 45250606 -40187874 - AluJo SINE Alu -18 294 1 199 146 44 38 chr17 45251262 45251315 -40187165 - MIR SINE MIR -63 145 100 240 289 0 0 chr17 45251955 45252007 -40186473 + L2 LINE L2 3254 3305 -8 851 193 11 33 chr17 45252125 45252306 -40186174 + MER69A DNA AcHobo 1 177 0 798 204 8 5 chr17 45252481 45252643 -40185837 - MSTD LTR MaLR 0 396 236 2072 108 14 4 chr17 45252643 45252921 -40185559 + AluSx SINE Alu 1 281 -31 336 48 0 0 chr17 45252921 45252963 -40185517 + (CA)n Simple_repeat Simple_repeat 1 42 0 798 204 8 5 chr17 45252963 45252977 -40185503 - MSTD LTR MaLR -133 263 251 864 241 102 53 chr17 45252978 45253017 -40185463 + HAL1 LINE L1 1000 1036 -1471 523 178 0 37 chr17 45253017 45253152 -40185328 + L1MB8 LINE L1 6049 6178 0 864 241 102 53 chr17 45253152 45253517 -40184963 + HAL1 LINE L1 1036 1439 -1068 2232 122 0 0 chr17 45253517 45253811 -40184669 + AluSx SINE Alu 1 294 -18 864 241 102 53 chr17 45253811 45253935 -40184545 + HAL1 LINE L1 1439 1555 -952 323 289 101 95 chr17 45254684 45255041 -40183439 - L2 LINE L2 0 3272 2914 246 260 0 0 chr17 45255592 45255642 -40182838 + L2 LINE L2 3262 3311 -2 590 269 233 0 chr17 45255822 45256015 -40182465 - MIR SINE MIR -10 252 15 483 345 38 13 chr17 45256582 45256817 -40181663 - MIR SINE MIR -2 260 20 316 224 122 77 chr17 45257458 45257614 -40180866 - MIR SINE MIR -79 183 21 196 243 0 0 chr17 45258497 45258534 -40179946 - L2 LINE L2 -6 3307 3271 1607 155 21 45 chr17 45258664 45258955 -40179525 + AluJb SINE Alu 15 298 -14 260 277 188 0 chr17 45259142 45259254 -40179226 - L2 LINE L2 0 3272 3140 320 247 0 13 chr17 45259946 45260023 -40178457 + MIR SINE MIR 187 262 0 1443 285 81 88 chr17 45260447 45261015 -40177465 + L3 LINE CR1 84 644 -933 1771 154 4 0 chr17 45261015 45261295 -40177185 - AluSx SINE Alu -31 281 1 1443 285 81 88 chr17 45261295 45261643 -40176837 + L3 LINE CR1 644 993 -584 235 228 51 63 chr17 45261686 45261765 -40176715 - MIR SINE MIR 0 262 185 2168 119 3 0 chr17 45261795 45262106 -40176374 - AluSx SINE Alu 0 312 1 1939 105 0 74 chr17 45262478 45262801 -40175679 + AluSx SINE Alu 1 299 -13 294 314 26 39 chr17 45263100 45263242 -40175238 - MIR SINE MIR -52 156 14 630 283 137 63 chr17 45263245 45263401 -40175079 + L3 LINE CR1 1047 1190 -387 1985 141 13 0 chr17 45263401 45263683 -40174797 + AluSx SINE Alu 1 289 -23 639 0 0 0 chr17 45263683 45263754 -40174726 + (CA)n Simple_repeat Simple_repeat 2 72 0 1985 141 13 0 chr17 45263754 45263777 -40174703 + AluSx SINE Alu 289 310 -2 630 283 137 63 chr17 45263777 45264030 -40174450 + L3 LINE CR1 1190 1486 -91 478 267 13 1 chr17 45264147 45264279 -40174201 - L1MB8 LINE L1 -3 6177 6043 230 305 80 73 chr17 45264624 45264658 -40173822 + MIR SINE MIR 73 105 -157 1686 175 7 0 chr17 45264658 45264961 -40173519 - AluJo SINE Alu -5 307 3 230 305 80 73 chr17 45264961 45265077 -40173403 + MIR SINE MIR 105 224 -38 2033 112 21 0 chr17 45265079 45265366 -40173114 - AluSx SINE Alu -19 293 1 606 127 16 71 chr17 45265889 45266015 -40172465 + L1MB8 LINE L1 5944 6062 -116 2005 121 0 0 chr17 45266017 45266347 -40172133 + AluSx SINE Alu 1 330 0 507 268 44 44 chr17 45266436 45266619 -40171861 - MIR SINE MIR -72 190 8 247 211 173 67 chr17 45266895 45266999 -40171481 - L2 LINE L2 -7 3306 3192 1957 85 66 0 chr17 45267012 45267283 -40171197 + AluSq SINE Alu 1 289 -24 669 47 28 0 chr17 45267283 45267389 -40171091 + (CATAA)n Simple_repeat Simple_repeat 2 110 0 41 0 0 0 chr17 45267605 45267646 -40170834 + AT_rich Low_complexity Low_complexity 1 41 0 814 120 38 30 chr17 45267646 45267779 -40170701 - AluJo SINE Alu -177 135 2 2270 104 0 0 chr17 45267837 45268145 -40170335 + AluSx SINE Alu 1 308 -4 1834 151 0 0 chr17 45269014 45269298 -40169182 + AluJb SINE Alu 7 290 -22 24 0 0 0 chr17 45269298 45269322 -40169158 + AT_rich Low_complexity Low_complexity 1 24 0 1509 239 101 10 chr17 45269949 45270355 -40168125 + L2 LINE L2 2362 2804 -510 557 181 60 130 chr17 45270384 45270600 -40167880 + L2 LINE L2 3109 3309 -4 2130 89 3 0 chr17 45270621 45270934 -40167546 + AluSp SINE Alu 1 314 0 227 178 67 0 chr17 45270948 45270993 -40167487 + L1ME4a LINE L1 5835 5882 -1926 1840 132 4 7 chr17 45271164 45271464 -40167016 + AluJo SINE Alu 3 301 0 186 43 0 0 chr17 45271468 45271491 -40166989 + (CA)n Simple_repeat Simple_repeat 1 23 0 377 258 134 18 chr17 45271603 45271820 -40166660 + L1ME4a LINE L1 5810 6051 -70 630 221 138 71 chr17 45271970 45272181 -40166299 + L2 LINE L2 2934 3176 -137 1613 164 0 7 chr17 45272181 45272450 -40166030 - AluJb SINE Alu -44 268 2 630 221 138 71 chr17 45272450 45272564 -40165916 + L2 LINE L2 3176 3281 -32 2059 122 0 0 chr17 45272566 45272854 -40165626 + AluSx SINE Alu 7 294 -18 1935 124 14 0 chr17 45273416 45273706 -40164774 - AluSx SINE Alu -18 294 1 571 302 47 30 chr17 45273764 45273999 -40164481 - LTR16C LTR ERVL -16 475 237 1028 263 86 104 chr17 45274134 45274204 -40164276 + MER77 LTR ERV1 24 94 -616 2452 62 0 0 chr17 45274204 45274510 -40163970 - AluY SINE Alu -2 309 4 1028 263 86 104 chr17 45274510 45275135 -40163345 + MER77 LTR ERV1 94 706 -4 1056 305 99 51 chr17 45275344 45275411 -40163069 + L3 LINE CR1 857 919 -658 1933 157 0 0 chr17 45275411 45275723 -40162757 + AluSx SINE Alu 1 312 0 1056 305 99 51 chr17 45275723 45276343 -40162137 + L3 LINE CR1 919 1577 0 2447 51 3 0 chr17 45276815 45277109 -40161371 + AluSp SINE Alu 1 295 -18 2178 107 0 0 chr17 45277232 45277531 -40160949 + AluSq SINE Alu 1 299 -14 1264 155 13 39 chr17 45277596 45277806 -40160674 - MER2 DNA MER2_type -1 344 139 3470 106 11 48 chr17 45277806 45278353 -40160127 + MER1A DNA MER1_type 1 527 0 1264 155 13 39 chr17 45278353 45278374 -40160106 - MER2 DNA MER2_type -206 139 119 518 141 43 11 chr17 45278374 45278466 -40160014 + AluSg/x SINE Alu 205 299 -10 694 159 11 93 chr17 45278466 45278524 -40159956 + MLT1C LTR MaLR 35 96 -294 1888 145 14 0 chr17 45278524 45278814 -40159666 + AluSx SINE Alu 1 294 -18 694 159 11 93 chr17 45278814 45278937 -40159543 + MLT1C LTR MaLR 96 201 -189 950 118 0 0 chr17 45278937 45279073 -40159407 + AluJb SINE Alu 1 136 -176 1953 141 0 3 chr17 45279073 45279371 -40159109 + AluSx SINE Alu 1 297 -15 768 206 67 6 chr17 45279413 45279578 -40158902 + MLT1C LTR MaLR 286 460 -7 668 232 6 42 chr17 45279606 45279774 -40158706 - MIR SINE MIR -24 238 77 2163 97 0 0 chr17 45279837 45280127 -40158353 + AluSx SINE Alu 7 296 -16 350 233 159 92 chr17 45280155 45280318 -40158162 - MIR SINE MIR -32 230 57 1936 105 58 10 chr17 45280319 45280614 -40157866 + AluSx SINE Alu 1 309 -3 1496 133 84 49 chr17 45280695 45280980 -40157500 - AluSg SINE Alu -15 295 1 2077 111 0 3 chr17 45281163 45281452 -40157028 - AluSx SINE Alu -24 288 1 344 244 58 64 chr17 45281457 45281613 -40156867 - L1MC4a LINE L1 -1813 5995 5841 27 29 0 0 chr17 45283312 45283346 -40155134 + AT_rich Low_complexity Low_complexity 1 34 0 270 363 66 39 chr17 45284703 45284885 -40153595 + L3b LINE CR1 1388 1574 -9 25 0 0 0 chr17 45284993 45285018 -40153462 + AT_rich Low_complexity Low_complexity 1 25 0 214 276 11 11 chr17 45285412 45285499 -40152981 + (CCCCG)n Simple_repeat Simple_repeat 3 89 0 31 26 0 0 chr17 45285630 45285668 -40152812 + GC_rich Low_complexity Low_complexity 1 38 0 195 146 0 0 chr17 45285967 45286008 -40152472 + (TCTCTG)n Simple_repeat Simple_repeat 3 43 0 213 163 23 0 chr17 45286249 45286292 -40152188 + (TA)n Simple_repeat Simple_repeat 1 44 0 243 324 73 36 chr17 45286601 45286820 -40151660 - L2 LINE L2 -914 2400 2174 2179 90 3 16 chr17 45286955 45287265 -40151215 + AluSx SINE Alu 1 306 -6 1961 82 99 0 chr17 45287342 45287624 -40150856 + AluSg SINE Alu 1 310 0 403 149 23 23 chr17 45287716 45287803 -40150677 + MIR SINE MIR 119 205 -57 2239 82 3 3 chr17 45287807 45288113 -40150367 - AluY SINE Alu -5 306 1 1650 163 13 16 chr17 45288142 45288455 -40150025 + AluJb SINE Alu 1 312 0 2263 73 27 0 chr17 45288732 45289033 -40149447 + AluSc SINE Alu 1 309 0 22 0 0 0 chr17 45289110 45289132 -40149348 + AT_rich Low_complexity Low_complexity 1 22 0 281 108 0 0 chr17 45289133 45289170 -40149310 - MER4E LTR ERV1 -76 703 667 1761 158 3 0 chr17 45289436 45289727 -40148753 + AluJo SINE Alu 1 292 -20 310 54 0 0 chr17 45289756 45289793 -40148687 + tRNA-Tyr-TAC tRNA tRNA 2 38 -38 274 269 176 19 chr17 45289986 45290094 -40148386 + MIR SINE MIR 63 187 -75 28 29 0 0 chr17 45290139 45290174 -40148306 + AT_rich Low_complexity Low_complexity 1 35 0 231 67 0 0 chr17 45290521 45290551 -40147929 - Alu SINE Alu -272 30 1 313 193 53 26 chr17 45290554 45290668 -40147812 - HAL1 LINE L1 -1420 1087 971 410 127 0 0 chr17 45290699 45290762 -40147718 - Alu SINE Alu -12 297 235 1486 176 0 4 chr17 45290763 45291036 -40147444 + AluJo SINE Alu 38 309 -3 257 353 115 0 chr17 45291038 45291160 -40147320 - L2 LINE L2 -15 3257 3122 246 282 21 39 chr17 45291305 45291346 -40147134 - MER5A DNA MER1_type -2 187 147 1219 172 26 111 chr17 45291346 45291483 -40146997 + AluYb8 SINE Alu 1 148 -170 2558 39 7 3 chr17 45291483 45291791 -40146689 - AluY SINE Alu -2 309 1 1219 172 26 111 chr17 45291791 45291996 -40146484 + AluYb8 SINE Alu 148 314 -4 246 282 21 39 chr17 45291996 45292096 -40146384 - MER5A DNA MER1_type -42 147 1 788 325 77 43 chr17 45292153 45292593 -40145887 - L2 LINE L2 -545 2769 2315 2218 85 7 0 chr17 45292621 45292914 -40145566 + AluSq SINE Alu 1 295 -18 1821 134 21 0 chr17 45293012 45293303 -40145177 + AluSx SINE Alu 1 297 -15 710 142 28 0 chr17 45293304 45293410 -40145070 + AluSx SINE Alu 2 110 -202 1470 112 0 0 chr17 45293454 45293659 -40144821 + AluSx SINE Alu 105 309 -1 414 200 22 0 chr17 45293659 45293749 -40144731 - AluJo/FLAM SINE Alu -169 133 42 732 236 6 6 chr17 45293815 45293976 -40144504 + FRAM SINE Alu 1 159 -17 453 199 68 57 chr17 45293984 45294042 -40144438 - HAL1 LINE L1 -1359 1148 1092 2108 125 0 0 chr17 45294042 45294346 -40144134 - AluSx SINE Alu -8 304 1 453 199 68 57 chr17 45294346 45294463 -40144017 - HAL1 LINE L1 -1415 1092 971 1218 150 0 42 chr17 45294494 45294662 -40143818 - AluSg/x SINE Alu -12 300 141 2091 115 13 3 chr17 45294662 45294966 -40143514 - AluSx SINE Alu 0 312 6 1218 150 0 42 chr17 45294966 45295010 -40143470 - AluSg/x SINE Alu -171 141 97 446 134 0 0 chr17 45295034 45295101 -40143379 - L1M4 LINE L1 -514 5664 5598 318 162 29 15 chr17 45295103 45295171 -40143309 - L1M4 LINE L1 -1040 5106 5038 1349 87 0 69 chr17 45295171 45295219 -40143261 + AluSc SINE Alu 90 140 -169 2347 72 3 7 chr17 45295219 45295525 -40142955 + AluSp SINE Alu 1 305 -8 1349 87 0 69 chr17 45295525 45295694 -40142786 + AluSc SINE Alu 140 292 -17 2703 199 43 34 chr17 45295747 45295910 -40142570 - L1M4 LINE L1 -1150 4996 4836 1421 156 50 63 chr17 45295910 45296059 -40142421 + AluJb SINE Alu 1 146 -166 2255 94 3 0 chr17 45296059 45296358 -40142122 + AluSp SINE Alu 1 300 -13 1421 156 50 63 chr17 45296358 45296509 -40141971 + AluJb SINE Alu 146 297 -15 2703 199 43 34 chr17 45296509 45297014 -40141466 - L1M4 LINE L1 -1310 4836 4322 746 247 13 6 chr17 45297014 45297172 -40141308 + FAM SINE Alu 1 159 -16 298 207 0 0 chr17 45297650 45297729 -40140751 - L1M4 LINE L1 -1810 4336 4258 2416 65 0 0 chr17 45297731 45298038 -40140442 + AluY SINE Alu 1 307 -4 1719 199 47 12 chr17 45298114 45298221 -40140259 - L1M4 LINE L1 -1712 4434 4332 2200 101 7 0 chr17 45298221 45298527 -40139953 - AluSg SINE Alu -2 308 1 1719 199 47 12 chr17 45298527 45298821 -40139659 - L1M4 LINE L1 -1814 4332 4019 1856 124 0 60 chr17 45298821 45298972 -40139508 + AluSx SINE Alu 1 125 -187 2072 100 0 35 chr17 45298972 45299283 -40139197 + AluY SINE Alu 1 300 -11 1856 124 0 60 chr17 45299283 45299446 -40139034 + AluSx SINE Alu 125 296 -16 989 232 55 48 chr17 45299447 45299609 -40138871 + MLT1A2 LTR MaLR 80 239 -135 2749 159 2 62 chr17 45299609 45299784 -40138696 + MER66B LTR ERV1 1 185 -301 2108 123 0 0 chr17 45299784 45300086 -40138394 - AluSg SINE Alu -8 302 1 2749 159 2 62 chr17 45300086 45300322 -40138158 + MER66B LTR ERV1 185 377 -109 1810 136 39 7 chr17 45300322 45300608 -40137872 + AluSx SINE Alu 1 295 -17 2749 159 2 62 chr17 45300608 45300712 -40137768 + MER66B LTR ERV1 377 486 0 989 232 55 48 chr17 45300712 45300842 -40137638 + MLT1A2 LTR MaLR 239 374 0 243 140 20 20 chr17 45300861 45300911 -40137569 + Charlie8 DNA MER1_type 1368 1417 -1000 27 0 0 0 chr17 45300965 45300992 -40137488 + AT_rich Low_complexity Low_complexity 1 27 0 1772 133 22 0 chr17 45300992 45301333 -40137147 + AluSx SINE Alu 1 347 0 703 156 7 71 chr17 45301334 45301475 -40137005 + FLAM_C SINE Alu 1 132 -11 2224 110 3 0 chr17 45301481 45301790 -40136690 + AluSp SINE Alu 1 310 -3 1583 167 6 45 chr17 45301889 45302201 -40136279 + AluJo SINE Alu 1 300 -12 2024 96 0 0 chr17 45302377 45302647 -40135833 - AluSg1 SINE Alu -10 299 30 1369 174 0 12 chr17 45302647 45302888 -40135592 - AluJb SINE Alu -45 267 30 1121 149 167 14 chr17 45302969 45303184 -40135296 - MER21B LTR ERV1 -615 248 1 255 254 101 80 chr17 45303193 45303331 -40135149 + L2 LINE L2 3171 3311 -2 692 199 18 21 chr17 45303439 45303775 -40134705 + GA-rich Low_complexity Low_complexity 1 335 0 221 140 60 0 chr17 45303787 45303837 -40134643 + A-rich Low_complexity Low_complexity 4 56 0 27 29 0 0 chr17 45303963 45303997 -40134483 + GC_rich Low_complexity Low_complexity 1 34 0 228 67 0 0 chr17 45306055 45306085 -40132395 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 * 518 122 0 11 chr17 45306083 45306173 -40132307 + (GGGA)n Simple_repeat Simple_repeat 4 92 0 180 241 0 0 chr17 45306178 45306236 -40132244 + A-rich Low_complexity Low_complexity 113 170 0 693 263 91 10 chr17 45306283 45306481 -40131999 + MIR SINE MIR 49 262 0 516 294 75 7 chr17 45306675 45306821 -40131659 - L2 LINE L2 0 3272 3117 1971 107 0 0 chr17 45307030 45307327 -40131153 + AluSx SINE Alu 10 306 0 1860 159 23 59 chr17 45308503 45308792 -40129688 - L1ME1 LINE L1 -5 6161 5863 2219 113 7 0 chr17 45308792 45309085 -40129395 - AluSx SINE Alu -17 295 1 1860 159 23 59 chr17 45309085 45309145 -40129335 - L1ME1 LINE L1 -303 5863 5825 935 224 180 14 chr17 45309145 45309440 -40129040 - MER2 DNA MER2_type 0 344 1 1860 159 23 59 chr17 45309440 45309480 -40129000 - L1ME1 LINE L1 -341 5825 5785 886 139 0 0 chr17 45309480 45309602 -40128878 + AluSg/x SINE Alu 104 225 -87 320 344 109 9 chr17 45309618 45309848 -40128632 + L2 LINE L2 1852 2104 -1210 2100 108 31 3 chr17 45310076 45310362 -40128118 - AluSx SINE Alu -18 294 1 946 136 8 0 chr17 45310364 45310496 -40127984 - AluSq/x SINE Alu -180 133 1 3493 54 35 0 chr17 45310589 45311017 -40127463 + MLT2A1 LTR ERVL 1 443 -1 494 139 0 0 chr17 45311017 45311089 -40127391 + AluJ/FLAM SINE Alu 7 78 -234 338 205 12 0 chr17 45311089 45311172 -40127308 + CT-rich Low_complexity Low_complexity 2 85 0 364 255 11 0 chr17 45311172 45311266 -40127214 - AluJb SINE Alu -1 301 207 717 112 0 0 chr17 45311267 45311365 -40127115 + AluJo/FRAM SINE Alu 202 299 -13 426 176 282 35 chr17 45311426 45311508 -40126972 + MER20 DNA MER1_type 3 63 -156 2419 87 3 0 chr17 45311508 45311808 -40126672 - AluSp SINE Alu -12 301 1 426 176 282 35 chr17 45311808 45311895 -40126585 + MER20 DNA MER1_type 63 214 -5 1463 148 0 0 chr17 45312466 45312675 -40125805 - AluJb SINE Alu -19 293 85 303 355 0 0 chr17 45313710 45313820 -40124660 + ERVL LTR ERVL 4372 4481 -1283 637 314 0 0 chr17 45313824 45314018 -40124462 + ERVL LTR ERVL 4777 4970 -794 386 38 0 19 chr17 45314021 45314074 -40124406 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 935 145 75 84 chr17 45314104 45314183 -40124297 - AluJb SINE Alu -100 212 134 2233 106 13 0 chr17 45314183 45314486 -40123994 - AluSg SINE Alu 0 310 4 2296 110 13 0 chr17 45314486 45314786 -40123694 - AluSx SINE Alu -8 304 1 935 145 75 84 chr17 45314786 45314919 -40123561 - AluJb SINE Alu -176 136 1 2395 86 3 3 chr17 45315011 45315312 -40123168 - AluSp SINE Alu -12 301 1 2672 43 0 0 chr17 45315318 45315621 -40122859 - AluY SINE Alu -8 303 1 503 165 74 16 chr17 45315625 45315746 -40122734 + MLT1A1 LTR MaLR 26 153 -212 240 88 0 0 chr17 45315760 45315794 -40122686 + Alu SINE Alu 12 45 -258 536 133 0 0 chr17 45315816 45315891 -40122589 + AluS SINE Alu 12 86 -227 269 217 17 0 chr17 45316089 45316149 -40122331 - AluJ/FRAM SINE Alu -12 290 230 2144 136 0 0 chr17 45316149 45316443 -40122037 - AluSx SINE Alu -18 294 1 195 271 42 0 chr17 45316577 45316625 -40121855 + L2 LINE L2 3255 3304 -9 2028 86 0 11 chr17 45316841 45317109 -40121371 + AluSc SINE Alu 1 265 -44 1395 102 42 5 chr17 45317209 45317424 -40121056 - MER30 DNA MER1_type -7 223 1 180 0 0 0 chr17 45317468 45317488 -40120992 + (T)n Simple_repeat Simple_repeat 1 20 0 569 322 85 27 chr17 45317715 45317973 -40120507 - L3 LINE CR1 -171 1406 1134 2378 65 0 26 chr17 45318416 45318745 -40119735 + AluY SINE Alu 1 311 0 853 263 109 40 chr17 45319023 45319502 -40118978 + L1ME4a LINE L1 5325 5847 -274 2309 102 0 0 chr17 45319502 45319796 -40118684 + AluSc SINE Alu 1 294 -15 853 263 109 40 chr17 45319796 45319859 -40118621 + L1ME4a LINE L1 5847 5904 -217 775 185 0 0 chr17 45320223 45320334 -40118146 - AluJb SINE Alu -65 247 134 1953 141 45 0 chr17 45320334 45320624 -40117856 - AluSx SINE Alu -9 303 1 775 185 0 0 chr17 45320624 45320647 -40117833 - AluJb SINE Alu -177 135 113 498 43 143 0 chr17 45320651 45320721 -40117759 - MER41B LTR ERV1 -385 250 171 2015 151 13 3 chr17 45320723 45321027 -40117453 - AluSx SINE Alu -5 307 1 739 240 34 22 chr17 45321211 45321390 -40117090 - AluJb SINE Alu -15 297 117 2273 115 0 3 chr17 45321504 45321809 -40116671 + AluSg SINE Alu 1 304 -6 2041 117 43 0 chr17 45322442 45322723 -40115757 + AluSx SINE Alu 1 293 -19 1617 174 22 7 chr17 45322773 45323049 -40115431 + AluJb SINE Alu 12 291 -21 1685 175 4 0 chr17 45323049 45323338 -40115142 - AluJb SINE Alu 0 302 13 921 119 0 0 chr17 45323548 45323666 -40114814 + AluSq/x SINE Alu 1 118 -195 21 0 0 0 chr17 45323670 45323691 -40114789 + AT_rich Low_complexity Low_complexity 1 21 0 1304 219 45 11 chr17 45323716 45324003 -40114477 + AluJb SINE Alu 1 297 -15 2033 150 13 3 chr17 45324187 45324493 -40113987 + AluSx SINE Alu 1 309 -3 487 57 143 0 chr17 45324495 45324565 -40113915 + MER41B LTR ERV1 171 250 -385 1451 151 50 0 chr17 45324592 45324811 -40113669 + AluSx SINE Alu 1 230 -82 991 212 6 0 chr17 45324912 45325082 -40113398 - AluJo SINE Alu -141 171 1 3167 207 26 50 chr17 45325082 45325179 -40113301 - L1M4 LINE L1 -1637 4509 4411 2371 111 3 0 chr17 45325179 45325485 -40112995 - AluSx SINE Alu -5 307 1 3167 207 26 50 chr17 45325485 45326301 -40112179 - L1M4 LINE L1 -1735 4411 3618 1983 136 7 33 chr17 45326410 45326711 -40111769 - AluSx SINE Alu -19 293 1 1037 194 129 50 chr17 45326712 45326990 -40111490 - AluJo SINE Alu 0 302 3 2014 108 10 33 chr17 45327630 45327936 -40110544 - AluSx SINE Alu -13 299 1 341 228 82 25 chr17 45330661 45330819 -40107661 + MER113 DNA MER1_type? 11 177 -344 2188 122 0 6 chr17 45330863 45331175 -40107305 + AluSg SINE Alu 1 310 0 1817 142 21 18 chr17 45331240 45331522 -40106958 + AluJo SINE Alu 7 289 -23 357 264 72 30 chr17 45331535 45331702 -40106778 + MER113 DNA MER1_type? 338 511 -10 8070 72 2 1 chr17 45331822 45332790 -40105690 + LTR5 LTR ERVK 1 969 0 283 291 13 0 chr17 45333185 45333264 -40105216 + L1ME LINE L1 5537 5616 -554 2273 113 3 0 chr17 45333266 45333567 -40104913 - AluSx SINE Alu -10 302 1 765 167 0 36 chr17 45333682 45333820 -40104660 + FLAM_C SINE Alu 1 133 0 2284 122 3 0 chr17 45333971 45334275 -40104205 + AluSx SINE Alu 3 307 -5 2269 154 95 188 chr17 45334276 45334372 -40104108 + L1M4 LINE L1 4412 4515 -1631 1667 213 3 16 chr17 45334372 45334686 -40103794 + AluJo SINE Alu 1 310 -2 2269 154 95 188 chr17 45334686 45335019 -40103461 + L1M4 LINE L1 4515 4877 -1269 758 169 15 8 chr17 45335019 45335149 -40103331 + FLAM_C SINE Alu 1 131 -12 2269 154 95 188 chr17 45335149 45335576 -40102904 + L1M4 LINE L1 4877 5290 -856 1124 179 90 90 chr17 45335576 45335805 -40102675 + AluJo SINE Alu 1 232 -70 2323 96 0 0 chr17 45335805 45336096 -40102384 + AluSg1 SINE Alu 1 291 -18 1124 179 90 90 chr17 45336096 45336156 -40102324 + AluJo SINE Alu 231 290 -12 2269 154 95 188 chr17 45336156 45336258 -40102222 + L1M4 LINE L1 5290 5400 -746 900 158 0 0 chr17 45336258 45336391 -40102089 + AluJb SINE Alu 1 133 -179 2277 114 3 16 chr17 45336391 45336708 -40101772 + AluSq SINE Alu 1 313 0 1786 157 16 33 chr17 45336894 45337200 -40101280 + AluJo SINE Alu 1 301 -11 610 101 11 0 chr17 45337335 45337424 -40101056 + AluSg/x SINE Alu 200 289 -21 1244 169 9 128 chr17 45338242 45338586 -40099894 + AluSp SINE Alu 10 312 -1 1968 124 14 0 chr17 45338648 45338938 -40099542 + AluSx SINE Alu 1 294 -18 373 150 0 0 chr17 45339057 45339117 -40099363 - AluSp SINE Alu -169 134 75 1950 131 3 20 chr17 45339145 45339443 -40099037 - AluSg SINE Alu -17 293 1 244 222 0 19 chr17 45339697 45339751 -40098729 + L2 LINE L2 3261 3313 0 313 209 40 115 chr17 45339912 45340060 -40098420 + MER20B DNA MER1_type 1 137 -646 1140 217 141 7 chr17 45340144 45340420 -40098060 + MER21B LTR ERV1 1 313 -550 1516 132 9 5 chr17 45340424 45340644 -40097836 + AluSx SINE Alu 1 221 -91 1971 127 7 7 chr17 45340684 45340967 -40097513 - AluSx SINE Alu -18 294 12 1395 131 0 0 chr17 45341025 45341223 -40097257 - AluSq SINE Alu -1 312 115 21 0 0 0 chr17 45341992 45342013 -40096467 + GC_rich Low_complexity Low_complexity 1 21 0 22 88 0 0 chr17 45342156 45342213 -40096267 + GC_rich Low_complexity Low_complexity 1 57 0 593 36 24 0 chr17 45343659 45343742 -40094738 + (TCTCCC)n Simple_repeat Simple_repeat 1 85 0 5604 72 27 83 chr17 45343742 45345226 -40093254 + SVA Other Other 57 868 -520 1484 82 0 0 chr17 45345515 45345698 -40092782 + AluSp SINE Alu 115 297 -16 234 0 0 0 chr17 45347253 45347279 -40091201 + (A)n Simple_repeat Simple_repeat 1 26 0 2423 75 0 38 chr17 45347279 45347598 -40090882 + AluY SINE Alu 1 307 -4 1265 100 19 43 chr17 45347598 45347787 -40090693 - L1PB1 LINE L1 -285 5866 5681 2434 91 0 0 chr17 45347787 45348084 -40090396 + AluSc SINE Alu 1 297 -12 1265 100 19 43 chr17 45348084 45348104 -40090376 - L1PB1 LINE L1 -470 5681 5662 1210 227 84 6 chr17 45348141 45348463 -40090017 + MLT1F1 LTR MaLR 188 534 -33 1707 176 14 17 chr17 45348467 45348762 -40089718 - AluJo SINE Alu -18 294 1 24 0 0 0 chr17 45348775 45348799 -40089681 + AT_rich Low_complexity Low_complexity 1 24 0 2418 93 0 19 chr17 45348820 45349133 -40089347 - AluSx SINE Alu -5 307 1 555 211 115 19 chr17 45349138 45349294 -40089186 - MIR SINE MIR -74 188 18 831 199 63 19 chr17 45349669 45349875 -40088605 - MLT1A2 LTR MaLR -1 373 159 2122 112 0 43 chr17 45349875 45350197 -40088283 - AluSx SINE Alu -2 310 3 534 188 102 0 chr17 45350914 45351029 -40087451 + MIR SINE MIR 33 159 -63 2395 98 0 13 chr17 45351035 45351350 -40087130 + AluSp SINE Alu 3 313 0 909 228 26 0 chr17 45351382 45351575 -40086905 + MIR SINE MIR 21 218 -44 396 238 12 0 chr17 45351576 45351656 -40086824 - MER2 DNA MER2_type -264 81 1 578 279 68 0 chr17 45352223 45352370 -40086110 - MER5B DNA MER1_type -14 164 8 803 192 50 39 chr17 45352391 45352573 -40085907 - MER5A DNA MER1_type -3 186 3 963 202 84 10 chr17 45352587 45352790 -40085690 + MER58A DNA MER1_type 5 222 -2 300 212 219 27 chr17 45352800 45352946 -40085534 + MLT1J1 LTR MaLR 246 419 -27 366 233 226 0 chr17 45352970 45353103 -40085377 + MIR SINE MIR 57 219 -43 187 305 17 17 chr17 45353654 45353713 -40084767 - L2 LINE L2 -9 3263 3205 2408 93 10 0 chr17 45353804 45354105 -40084375 + AluSx SINE Alu 1 304 -8 189 107 0 0 chr17 45354118 45354146 -40084334 + (GGAGA)n Simple_repeat Simple_repeat 5 32 0 239 239 94 16 chr17 45354226 45354330 -40084150 + MER5B DNA MER1_type 31 165 -24 579 182 52 103 chr17 45354436 45354568 -40083912 + L1ME LINE L1 5100 5237 -929 4433 52 2 9 chr17 45354568 45355126 -40083354 + L1PA5 LINE L1 5601 6154 0 579 182 52 103 chr17 45355126 45355390 -40083090 + L1ME LINE L1 5237 5473 -693 492 259 54 0 chr17 45355391 45355503 -40082977 + MIR SINE MIR 58 175 -87 414 57 0 0 chr17 45355771 45355824 -40082656 + (TTCA)n Simple_repeat Simple_repeat 4 56 0 890 136 0 0 chr17 45356691 45356816 -40081664 + FLAM_A SINE Alu 1 125 -8 1829 131 90 103 chr17 45357287 45357373 -40081107 + LTR12 LTR ERV1 4 90 -624 2563 55 0 0 chr17 45357373 45357666 -40080814 + AluY SINE Alu 1 293 -18 1829 131 90 103 chr17 45357666 45358066 -40080414 + LTR12 LTR ERV1 90 484 -230 580 224 158 6 chr17 45358400 45358565 -40079915 - MIR SINE MIR -9 253 64 189 0 0 0 chr17 45359466 45359487 -40078993 + (CAG)n Simple_repeat Simple_repeat 1 21 0 358 242 121 0 chr17 45359863 45359987 -40078493 - MER96 DNA MER1_type? 0 175 37 186 269 11 54 chr17 45360185 45360278 -40078202 + L2 LINE L2 2949 3037 -235 228 222 0 19 chr17 45360951 45361005 -40077475 + GA-rich Low_complexity Low_complexity 2 54 0 645 272 35 12 chr17 45362626 45362799 -40075681 - MIR SINE MIR -14 248 72 335 237 11 21 chr17 45363078 45363128 -40075352 + MIR3 SINE MIR 111 161 -47 513 315 11 28 chr17 45363128 45363309 -40075171 - MER5B DNA MER1_type 0 178 1 335 237 11 21 chr17 45363309 45363351 -40075129 + MIR3 SINE MIR 161 202 -6 497 135 0 0 chr17 45363361 45363435 -40075045 + MER58A DNA MER1_type 45 118 0 320 288 68 18 chr17 45363647 45363810 -40074670 - L3b LINE CR1 -310 1273 1103 516 129 97 0 chr17 45364202 45364295 -40074185 - L1MB8 LINE L1 -1 6177 6076 228 191 0 29 chr17 45364331 45364399 -40074081 + MLT1F LTR MaLR 464 529 -13 308 294 0 46 chr17 45364510 45364619 -40073861 - MIR SINE MIR -6 256 153 2439 170 36 42 chr17 45364785 45364936 -40073544 + LTR26B LTR ERV1 30 180 -351 2355 104 3 0 chr17 45364936 45365244 -40073236 - AluSq SINE Alu -4 309 1 2439 170 36 42 chr17 45365244 45365259 -40073221 + LTR26B LTR ERV1 180 194 -337 1889 154 52 13 chr17 45365259 45365643 -40072837 + L1MB8 LINE L1 5776 6174 -4 2439 170 36 42 chr17 45365643 45365980 -40072500 + LTR26B LTR ERV1 194 531 0 776 251 98 16 chr17 45365980 45366380 -40072100 - MLT1L LTR MaLR -134 481 10 467 279 23 23 chr17 45366391 45366520 -40071960 - MIR SINE MIR -111 151 23 181 236 91 0 chr17 45366930 45366985 -40071495 - L3 LINE CR1 -343 1234 1175 243 235 0 0 chr17 45367793 45367844 -40070636 - MIR SINE MIR -61 147 97 536 161 32 0 chr17 45368510 45368603 -40069877 + MER5A DNA MER1_type 4 99 -90 2287 109 3 6 chr17 45368772 45369085 -40069395 + AluSp SINE Alu 1 312 -1 3482 153 28 55 chr17 45369098 45369287 -40069193 + L1MB4 LINE L1 5486 5679 -501 2177 129 0 28 chr17 45369287 45369604 -40068876 + AluSq SINE Alu 1 308 -5 3482 153 28 55 chr17 45369604 45370065 -40068415 + L1MB4 LINE L1 5679 6118 -62 2203 132 3 0 chr17 45370065 45370376 -40068104 + AluSx SINE Alu 1 312 0 3482 153 28 55 chr17 45370376 45370430 -40068050 + L1MB4 LINE L1 6118 6172 -8 401 198 26 78 chr17 45371215 45371270 -40067210 + MIR3 SINE MIR 96 143 -65 2022 141 3 10 chr17 45371270 45371574 -40066906 + AluJo SINE Alu 1 302 -10 401 198 26 78 chr17 45371574 45371634 -40066846 + MIR3 SINE MIR 143 205 -3 257 195 58 81 chr17 45371770 45371857 -40066623 + MIR SINE MIR 178 262 0 1940 144 0 17 chr17 45372880 45373179 -40065301 - AluJo SINE Alu -18 294 1 199 146 44 38 chr17 45373843 45373896 -40064584 - MIR SINE MIR -63 145 100 240 289 0 0 chr17 45374536 45374588 -40063892 + L2 LINE L2 3254 3305 -8 851 193 11 33 chr17 45374706 45374887 -40063593 + MER69A DNA AcHobo 1 177 0 798 204 8 5 chr17 45375062 45375224 -40063256 - MSTD LTR MaLR 0 396 236 2072 108 14 4 chr17 45375224 45375502 -40062978 + AluSx SINE Alu 1 281 -31 318 50 0 0 chr17 45375502 45375542 -40062938 + (CA)n Simple_repeat Simple_repeat 1 40 0 798 204 8 5 chr17 45375542 45375556 -40062924 - MSTD LTR MaLR -133 263 251 864 241 102 53 chr17 45375557 45375596 -40062884 + HAL1 LINE L1 1000 1036 -1471 523 178 0 37 chr17 45375596 45375731 -40062749 + L1MB8 LINE L1 6049 6178 0 864 241 102 53 chr17 45375731 45376096 -40062384 + HAL1 LINE L1 1036 1439 -1068 2241 122 0 0 chr17 45376096 45376391 -40062089 + AluSx SINE Alu 1 295 -17 864 241 102 53 chr17 45376391 45376515 -40061965 + HAL1 LINE L1 1439 1555 -952 323 289 101 95 chr17 45377264 45377621 -40060859 - L2 LINE L2 0 3272 2914 246 260 0 0 chr17 45378172 45378222 -40060258 + L2 LINE L2 3262 3311 -2 590 269 233 0 chr17 45378402 45378595 -40059885 - MIR SINE MIR -10 252 15 483 345 38 13 chr17 45379162 45379397 -40059083 - MIR SINE MIR -2 260 20 319 224 122 77 chr17 45380038 45380194 -40058286 - MIR SINE MIR -79 183 21 193 243 0 0 chr17 45381077 45381114 -40057366 - L2 LINE L2 -6 3307 3271 1607 155 21 45 chr17 45381244 45381535 -40056945 + AluJb SINE Alu 15 298 -14 256 277 188 0 chr17 45381722 45381834 -40056646 - L2 LINE L2 0 3272 3140 317 247 0 13 chr17 45382527 45382604 -40055876 + MIR SINE MIR 187 262 0 1440 284 81 88 chr17 45383028 45383596 -40054884 + L3 LINE CR1 84 644 -933 1909 154 4 0 chr17 45383596 45383876 -40054604 - AluSx SINE Alu -31 281 1 1440 284 81 88 chr17 45383876 45384224 -40054256 + L3 LINE CR1 644 993 -584 230 228 51 63 chr17 45384267 45384346 -40054134 - MIR SINE MIR 0 262 185 2254 127 3 0 chr17 45384372 45384679 -40053801 - AluSx SINE Alu -4 308 1 835 259 18 28 chr17 45385011 45385297 -40053183 - AluY SINE Alu -7 304 22 378 0 0 0 chr17 45385322 45385364 -40053116 + (T)n Simple_repeat Simple_repeat 1 42 0 2396 74 3 0 chr17 45386938 45387234 -40051246 - AluSp SINE Alu -12 301 5 2106 95 0 3 chr17 45387240 45387535 -40050945 + L1PB1 LINE L1 5858 6151 0 425 270 44 38 chr17 45387557 45387716 -40050764 - MLT1F LTR MaLR -382 160 1 2263 102 0 3 chr17 45387730 45388025 -40050455 - AluSx SINE Alu -18 294 1 332 297 87 7 chr17 45388049 45388187 -40050293 + L1MC4 LINE L1 7894 8042 0 1991 165 0 0 chr17 45388252 45388555 -40049925 - AluSx SINE Alu -9 303 1 677 60 0 0 chr17 45388555 45388638 -40049842 - AluS SINE Alu -228 84 2 798 161 0 29 chr17 45388679 45388816 -40049664 - FLAM_C SINE Alu 0 133 1 1213 77 6 0 chr17 45388963 45389119 -40049361 + AluSp/q SINE Alu 157 313 0 1632 166 7 21 chr17 45389234 45389547 -40048933 + AluJb SINE Alu 3 311 0 1023 157 0 56 chr17 45389678 45389856 -40048624 + AluJb SINE Alu 130 297 -15 2088 101 57 13 chr17 45389937 45390235 -40048245 - AluSq SINE Alu -2 311 1 380 277 176 0 chr17 45390236 45390384 -40048096 + MIR SINE MIR 57 230 -32 2362 89 0 0 chr17 45390417 45390708 -40047772 - AluSx SINE Alu -16 296 6 672 232 6 42 chr17 45390770 45390938 -40047542 + MIR SINE MIR 77 238 -24 705 200 73 12 chr17 45390966 45391131 -40047349 - MLT1B LTR MaLR -7 460 286 2176 128 0 3 chr17 45391173 45391471 -40047009 - AluSx SINE Alu -15 297 1 1054 103 0 0 chr17 45391471 45391607 -40046873 - AluJb SINE Alu -176 136 1 749 131 8 157 chr17 45391607 45391730 -40046750 - MLT1B LTR MaLR -189 201 61 2031 145 17 0 chr17 45391730 45392019 -40046461 - AluSx SINE Alu -18 294 1 749 131 8 157 chr17 45392019 45392081 -40046399 - MLT1B LTR MaLR -329 61 56 1820 147 16 36 chr17 45392081 45392387 -40046093 - AluJo SINE Alu -12 300 1 749 131 8 157 chr17 45392387 45392436 -40046044 - MLT1B LTR MaLR -334 56 1 2161 90 52 0 chr17 45392595 45392885 -40045595 - AluSq SINE Alu -8 305 1 520 342 120 38 chr17 45392890 45393146 -40045334 + L2 LINE L2 2071 2305 -1009 2294 109 3 0 chr17 45393146 45393457 -40045023 - AluSx SINE Alu 0 312 1 520 342 120 38 chr17 45393457 45393808 -40044672 + L2 LINE L2 2305 2728 -586 768 80 0 0 chr17 45394044 45394144 -40044336 + HY3 scRNA scRNA 1 100 -1 337 226 89 8 chr17 45394224 45394348 -40044132 + L1MC/D LINE L1 5333 5466 -2342 2422 75 0 3 chr17 45394540 45394835 -40043645 - AluSq SINE Alu -7 306 13 1424 107 10 0 chr17 45394935 45395131 -40043349 + AluSq SINE Alu 105 302 -11 874 120 0 0 chr17 45395144 45395261 -40043219 - AluSq/x SINE Alu -195 117 1 191 35 0 35 chr17 45395275 45395304 -40043176 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 45395411 45395433 -40043047 + (T)n Simple_repeat Simple_repeat 1 22 0 604 167 0 0 chr17 45395440 45395530 -40042950 - AluJ/FLAM SINE Alu -219 93 4 207 156 0 0 chr17 45395554 45395586 -40042894 + L2 LINE L2 3272 3303 -10 1180 79 11 0 chr17 45396519 45396697 -40041783 + (TTC)n Simple_repeat Simple_repeat 1 180 0 545 108 11 0 chr17 45396697 45396785 -40041695 + (TCC)n Simple_repeat Simple_repeat 3 91 0 2149 126 13 7 chr17 45396787 45397096 -40041384 - AluJb SINE Alu -1 311 1 1660 134 0 0 chr17 45397134 45397365 -40041115 + AluSx SINE Alu 2 232 -80 34 42 0 0 chr17 45398235 45398283 -40040197 + GC_rich Low_complexity Low_complexity 1 48 0 1160 88 12 6 chr17 45399202 45399362 -40039118 - AluSx SINE Alu -15 295 135 1099 80 0 7 chr17 45399473 45399610 -40038870 - AluSx SINE Alu -170 142 7 23 0 0 0 chr17 45400278 45400301 -40038179 + AT_rich Low_complexity Low_complexity 1 23 0 2229 74 42 0 chr17 45400527 45400811 -40037669 + AluSp SINE Alu 1 296 -17 24 0 0 0 chr17 45400843 45400867 -40037613 + AT_rich Low_complexity Low_complexity 1 24 0 2165 104 24 0 chr17 45401902 45402190 -40036290 + AluSg SINE Alu 1 295 -15 1521 112 0 5 chr17 45402310 45402515 -40035965 - AluSx SINE Alu -108 204 1 1823 159 0 35 chr17 45402630 45402944 -40035536 + AluJo SINE Alu 1 303 -9 2300 97 7 3 chr17 45402948 45403257 -40035223 + AluY SINE Alu 1 310 -1 288 0 0 0 chr17 45403262 45403294 -40035186 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 2264 125 0 3 chr17 45403812 45404125 -40034355 + AluJb SINE Alu 1 312 0 2301 99 3 0 chr17 45404730 45405024 -40033456 + AluSq SINE Alu 1 295 -18 2388 95 3 16 chr17 45405728 45406044 -40032436 + AluSp SINE Alu 2 313 0 185 65 32 0 chr17 45407087 45407118 -40031362 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2344 104 0 3 chr17 45408197 45408504 -40029976 + AluSq SINE Alu 1 306 -7 1962 136 11 3 chr17 45408852 45409138 -40029342 + AluSg SINE Alu 1 288 -22 2173 123 3 40 chr17 45409425 45409750 -40028730 + AluSp SINE Alu 1 313 0 1626 134 0 0 chr17 45611023 45611254 -39827226 - AluSx SINE Alu -80 232 2 1981 142 13 10 chr17 45611292 45611602 -39826878 + AluJb SINE Alu 1 311 -1 322 27 0 0 chr17 45613963 45614000 -39824480 + MLT2A1 LTR ERVL 407 443 -1 497 153 0 0 chr17 45614000 45614072 -39824408 + AluJ/FLAM SINE Alu 7 78 -234 340 180 11 22 chr17 45614072 45614161 -39824319 + CT-rich Low_complexity Low_complexity 4 91 0 410 260 10 0 chr17 45614164 45614260 -39824220 - AluJb SINE Alu -11 301 205 * 740 112 0 0 chr17 45614259 45614357 -39824123 + AluJo/FRAM SINE Alu 202 299 -13 467 182 282 35 chr17 45614418 45614500 -39823980 + MER20 DNA MER1_type 3 63 -156 2377 87 3 0 chr17 45614500 45614798 -39823682 - AluSp SINE Alu -14 299 1 467 182 282 35 chr17 45614798 45614885 -39823595 + MER20 DNA MER1_type 63 214 -5 1391 146 10 0 chr17 45615456 45615662 -39822818 - AluJb SINE Alu -20 292 85 189 0 0 0 chr17 45615663 45615684 -39822796 + (T)n Simple_repeat Simple_repeat 1 21 0 9861 44 12 85 chr17 45616441 45617884 -39820596 - SVA Other Other 0 1386 50 211 361 111 9 chr17 45618717 45618825 -39819655 - L2 LINE L2 -32 3240 3122 2118 134 0 7 chr17 45618974 45619273 -39819207 + AluSc SINE Alu 1 297 -12 389 265 272 6 chr17 45619346 45619508 -39818972 + MIR SINE MIR 57 261 -1 771 250 68 0 chr17 45619576 45619752 -39818728 + MER5A DNA MER1_type 2 189 0 1771 172 17 3 chr17 45619793 45620084 -39818396 + AluJb SINE Alu 1 295 -17 359 315 93 46 chr17 45620146 45620362 -39818118 - MIR SINE MIR -14 248 23 473 332 143 44 chr17 45620885 45621243 -39817237 - L2 LINE L2 -569 2745 2424 2284 107 3 0 chr17 45621243 45621552 -39816928 + AluSq SINE Alu 1 310 -3 473 332 143 44 chr17 45621552 45621685 -39816795 - L2 LINE L2 -890 2424 2306 2041 131 0 17 chr17 45621685 45621983 -39816497 + AluSx SINE Alu 1 293 -19 473 332 143 44 chr17 45621983 45622077 -39816403 - L2 LINE L2 -1008 2306 2101 560 239 64 32 chr17 45622291 45622479 -39816001 + L1MC5 LINE L1 7696 7889 -72 1397 153 87 42 chr17 45622670 45622958 -39815522 - AluJo SINE Alu -11 301 1 2246 72 41 14 chr17 45624722 45625015 -39813465 + AluY SINE Alu 2 302 -9 240 263 150 0 chr17 45625137 45625217 -39813263 - MIR SINE MIR -81 127 36 689 188 109 7 chr17 45625254 45625392 -39813088 + MER46A DNA MER2_type 1 152 -84 1717 172 56 0 chr17 45625400 45625703 -39812777 - MER2 DNA MER2_type -25 320 1 338 174 196 22 chr17 45625703 45625774 -39812706 + MER46A DNA MER2_type 150 236 0 190 307 13 40 chr17 45626235 45626310 -39812170 + L2 LINE L2 3234 3306 -7 223 299 22 58 chr17 45626677 45626814 -39811666 + MIR SINE MIR 16 147 -61 254 329 0 0 chr17 45626953 45627023 -39811457 + A-rich Low_complexity Low_complexity 4 73 0 247 195 0 0 chr17 45627202 45627243 -39811237 - L1ME4a LINE L1 -95 6026 5986 195 129 0 0 chr17 45627245 45627276 -39811204 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 1841 165 86 27 chr17 45627417 45628122 -39810358 + L1M4 LINE L1 4884 5620 -564 1322 149 5 9 chr17 45629009 45629224 -39809256 - AluSg/x SINE Alu -5 307 94 1404 172 52 30 chr17 45629460 45629728 -39808752 + AluJo SINE Alu 1 274 -38 198 0 0 0 chr17 45629740 45629762 -39808718 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 344 283 86 47 chr17 45629766 45629999 -39808481 + L1ME LINE L1 5378 5619 -502 1981 100 0 0 chr17 45630375 45630648 -39807832 + AluSq SINE Alu 37 309 0 2623 58 0 0 chr17 45630650 45630959 -39807521 + AluY SINE Alu 1 309 -2 302 263 88 35 chr17 45630981 45631095 -39807385 - MIR SINE MIR -73 135 16 1984 138 3 3 chr17 45632856 45633152 -39805328 - AluSx SINE Alu -11 301 6 315 329 18 55 chr17 45633391 45633555 -39804925 - MIR SINE MIR -69 193 36 241 93 186 0 chr17 45633600 45633643 -39804837 - MER66B LTR ERV1 -141 345 295 2847 13 0 0 chr17 45633679 45633988 -39804492 + AluYa5 SINE Alu 1 309 -2 560 195 114 32 chr17 45634050 45634173 -39804307 + FLAM_A SINE Alu 1 133 0 23 0 0 0 chr17 45634181 45634204 -39804276 + AT_rich Low_complexity Low_complexity 1 23 0 1775 174 13 7 chr17 45634420 45634724 -39803756 + AluJb SINE Alu 1 306 -6 213 132 0 0 chr17 45634724 45634762 -39803718 + (GA)n Simple_repeat Simple_repeat 1 38 0 254 297 81 60 chr17 45635078 45635263 -39803217 + MIR SINE MIR 73 261 -1 1924 136 17 17 chr17 45635718 45636013 -39802467 - AluSx SINE Alu -17 295 1 21 0 0 0 chr17 45636025 45636046 -39802434 + AT_rich Low_complexity Low_complexity 1 21 0 2565 59 3 0 chr17 45636124 45636428 -39802052 - AluY SINE Alu -6 305 1 1252 197 5 5 chr17 45636551 45636769 -39801711 - MER58A DNA MER1_type 0 224 7 2212 67 0 88 chr17 45636853 45637151 -39801329 + AluY SINE Alu 1 269 -42 194 0 39 0 chr17 45637151 45637177 -39801303 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2212 67 0 88 chr17 45637177 45637209 -39801271 + AluY SINE Alu 269 302 -9 1110 274 60 50 chr17 45638337 45638818 -39799662 + L2 LINE L2 2828 3313 0 589 274 48 6 chr17 45639027 45639195 -39799285 - MER5B DNA MER1_type 0 178 4 1392 143 4 13 chr17 45641477 45641707 -39796773 - AluJb SINE Alu -82 230 3 450 177 212 35 chr17 45641969 45642082 -39796398 - FLAM_C SINE Alu -3 140 8 2189 119 17 0 chr17 45642283 45642585 -39795895 - AluSx SINE Alu -5 307 1 820 227 10 31 chr17 45642612 45642806 -39795674 + MER20 DNA MER1_type 30 219 0 861 248 0 0 chr17 45642914 45643071 -39795409 + FRAM SINE Alu 1 157 -19 2133 112 3 3 chr17 45643195 45643481 -39794999 + AluSx SINE Alu 4 289 -23 23 0 0 0 chr17 45643717 45643740 -39794740 + AT_rich Low_complexity Low_complexity 1 23 0 459 109 0 0 chr17 45643752 45643816 -39794664 - FLAM_A SINE Alu -26 116 53 1131 134 0 0 chr17 45643880 45644044 -39794436 + AluSg/x SINE Alu 135 298 -12 1046 127 18 24 chr17 45645491 45645657 -39792823 - AluSg/x SINE Alu -14 298 134 2323 109 0 0 chr17 45645657 45645968 -39792512 - AluSx SINE Alu -1 311 1 229 270 32 16 chr17 45647197 45647260 -39791220 + MIR SINE MIR 82 145 -117 1761 139 21 7 chr17 45647436 45647717 -39790763 - AluJb SINE Alu -23 289 5 389 249 145 21 chr17 45648003 45648196 -39790284 + MIR SINE MIR 46 262 0 2202 79 0 70 chr17 45648260 45648576 -39789904 + AluY SINE Alu 1 294 -17 23 0 0 0 chr17 45649571 45649594 -39788886 + AT_rich Low_complexity Low_complexity 1 23 0 521 304 203 55 chr17 45649615 45650398 -39788082 + L2 LINE L2 2396 3272 0 846 206 6 0 chr17 45650493 45650653 -39787827 - FRAM SINE Alu -15 161 1 203 161 0 0 chr17 45651134 45651165 -39787315 - MIR SINE MIR -26 236 206 967 188 6 11 chr17 45652068 45652236 -39786244 + AluJb SINE Alu 118 286 -26 189 74 0 0 chr17 45652236 45652263 -39786217 + (CATA)n Simple_repeat Simple_repeat 2 28 0 967 188 6 11 chr17 45652263 45652275 -39786205 + AluJb SINE Alu 286 297 -15 2311 68 0 7 chr17 45652346 45652638 -39785842 - AluY SINE Alu 0 311 22 2121 134 0 0 chr17 45652640 45652938 -39785542 - AluSx SINE Alu -14 298 1 2212 103 0 10 chr17 45653056 45653356 -39785124 + AluSx SINE Alu 1 297 -15 2235 111 0 0 chr17 45653357 45653655 -39784825 + AluSq SINE Alu 1 298 -15 250 270 0 0 chr17 45654133 45654196 -39784284 + A-rich Low_complexity Low_complexity 1 63 0 2249 84 10 13 chr17 45655479 45655778 -39782702 - AluSp SINE Alu -15 298 1 1325 127 0 78 chr17 45657026 45657270 -39781210 + AluSg SINE Alu 49 273 -37 227 54 27 0 chr17 45657274 45657311 -39781169 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 372 275 180 37 chr17 45659914 45660369 -39778111 + L2 LINE L2 1594 2113 -1201 3166 190 70 75 chr17 45660636 45661334 -39777146 + Charlie1a DNA MER1_type 1 694 -2067 2142 109 0 0 chr17 45661334 45661608 -39776872 - AluSc SINE Alu -33 276 3 3166 190 70 75 chr17 45661608 45661799 -39776681 + Charlie1a DNA MER1_type 694 885 -570 1604 169 71 0 chr17 45661816 45662083 -39776397 - AluJb SINE Alu -26 286 1 22 0 0 0 chr17 45662091 45662113 -39776367 + AT_rich Low_complexity Low_complexity 1 22 0 306 188 0 29 chr17 45662140 45662209 -39776271 + Charlie1a DNA MER1_type 1389 1455 0 477 0 0 0 chr17 45662438 45662491 -39775989 + (TG)n Simple_repeat Simple_repeat 2 54 0 2114 126 0 0 chr17 45662491 45662777 -39775703 - AluSx SINE Alu -26 286 1 22 56 0 0 chr17 45662945 45662981 -39775499 + AT_rich Low_complexity Low_complexity 1 36 0 2270 117 0 0 chr17 45663536 45663836 -39774644 + AluSq SINE Alu 1 300 -13 231 304 136 8 chr17 45664213 45664338 -39774142 + MIR SINE MIR 55 195 -67 416 205 218 35 chr17 45664556 45664746 -39773734 + L1ME4a LINE L1 5708 5933 -188 2453 70 0 7 chr17 45664905 45665204 -39773276 - AluY SINE Alu -14 297 1 705 234 42 37 chr17 45666122 45666336 -39772144 - MER20 DNA MER1_type -1 218 4 2145 109 20 3 chr17 45666914 45667207 -39771273 + AluSq SINE Alu 1 298 -15 2196 127 0 6 chr17 45667341 45667656 -39770824 + AluSq SINE Alu 1 313 0 1089 164 0 0 chr17 45667659 45667836 -39770644 + AluSg/x SINE Alu 127 303 -7 798 163 0 0 chr17 45667845 45667974 -39770506 + FLAM_C SINE Alu 1 129 -4 241 91 45 0 chr17 45667974 45668018 -39770462 - L1MC4 LINE L1 -1349 6693 6648 193 354 56 21 chr17 45668063 45668207 -39770273 - L2 LINE L2 -586 2728 2580 252 369 0 0 chr17 45668406 45668490 -39769990 + L2 LINE L2 2553 2636 -678 2235 104 0 7 chr17 45668561 45668859 -39769621 - AluSq SINE Alu -17 296 1 691 223 163 5 chr17 45669749 45669964 -39768516 - MIR SINE MIR -7 255 7 220 349 0 0 chr17 45670211 45670274 -39768206 - L2 LINE L2 -215 3057 2995 553 164 109 0 chr17 45670274 45670384 -39768096 + FLAM_A SINE Alu 1 122 -11 1191 187 167 12 chr17 45670425 45670682 -39767798 + AluJb SINE Alu 1 297 -5 199 212 15 15 chr17 45670682 45670748 -39767732 + G-rich Low_complexity Low_complexity 1 66 0 245 95 0 24 chr17 45670750 45670792 -39767688 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 1516 141 153 0 chr17 45670796 45671058 -39767422 + AluSx SINE Alu 1 302 0 206 238 32 32 chr17 45671315 45671378 -39767102 - L2 LINE L2 -210 3062 3000 189 318 40 27 chr17 45671751 45671899 -39766581 + L2 LINE L2 2965 3114 -158 1948 121 45 7 chr17 45671965 45672254 -39766226 - AluSg SINE Alu -10 300 1 364 263 77 26 chr17 45672586 45672742 -39765738 + L1MC/D LINE L1 5579 5742 -2066 468 150 0 0 chr17 45672782 45672862 -39765618 + (CA)n Simple_repeat Simple_repeat 2 81 0 635 205 8 8 chr17 45672868 45672990 -39765490 + FLAM_C SINE Alu 2 123 -20 2303 78 0 29 chr17 45673221 45673529 -39764951 + AluY SINE Alu 1 299 -12 2256 82 16 26 chr17 45673855 45674159 -39764321 - AluSx SINE Alu -11 301 1 22 0 0 0 chr17 45675087 45675109 -39763371 + AT_rich Low_complexity Low_complexity 1 22 0 2227 105 6 6 chr17 45675876 45676189 -39762291 + AluSq SINE Alu 1 313 0 510 205 66 96 chr17 45676211 45676377 -39762103 + FAM SINE Alu 1 42 -7 2075 104 0 74 chr17 45676728 45677054 -39761426 + AluSx SINE Alu 1 302 -10 227 226 12 48 chr17 45679859 45679943 -39758537 + GA-rich Low_complexity Low_complexity 5 85 0 39 68 0 0 chr17 45680014 45680088 -39758392 + GC_rich Low_complexity Low_complexity 1 74 0 23 33 0 0 chr17 45680253 45680283 -39758197 + GC_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr17 45680397 45680421 -39758059 + GC_rich Low_complexity Low_complexity 1 24 0 183 80 0 0 chr17 45680558 45680583 -39757897 + (CGAG)n Simple_repeat Simple_repeat 2 26 0 51 42 0 0 chr17 45680653 45680725 -39757755 + GC_rich Low_complexity Low_complexity 1 72 0 23 0 0 0 chr17 45681281 45681304 -39757176 + GC_rich Low_complexity Low_complexity 1 23 0 1229 138 149 46 chr17 45682698 45682959 -39755521 - AluJo SINE Alu -18 294 7 1734 168 33 13 chr17 45683087 45683391 -39755089 + AluJb SINE Alu 1 310 -2 275 119 24 0 chr17 45683467 45683509 -39754971 + MLT1L LTR MaLR 169 211 -404 338 223 131 97 chr17 45683649 45683824 -39754656 + MLT1L LTR MaLR 374 577 -34 1772 160 3 26 chr17 45683952 45684259 -39754221 + AluJo SINE Alu 1 300 -12 183 156 0 0 chr17 45684259 45684291 -39754189 + GA-rich Low_complexity Low_complexity 1 32 0 2199 116 0 0 chr17 45684488 45684780 -39753700 + AluSx SINE Alu 1 292 -20 222 346 77 0 chr17 45685156 45685260 -39753220 + L2 LINE L2 3201 3312 -1 372 271 181 0 chr17 45685264 45685408 -39753072 + MIR SINE MIR 4 173 -89 243 0 0 0 chr17 45685550 45685577 -39752903 + (A)n Simple_repeat Simple_repeat 1 27 0 2026 152 0 0 chr17 45685579 45685869 -39752611 + AluSx SINE Alu 3 292 -20 252 0 0 0 chr17 45687166 45687194 -39751286 + (CA)n Simple_repeat Simple_repeat 2 29 0 2248 95 0 0 chr17 45687588 45687873 -39750607 + AluY SINE Alu 1 285 -26 21 0 0 0 chr17 45687873 45687894 -39750586 + AT_rich Low_complexity Low_complexity 1 21 0 2146 109 3 26 chr17 45688037 45688339 -39750141 - AluSx SINE Alu -17 295 1 1835 128 48 37 chr17 45688535 45688717 -39749763 + MER46B DNA MER2_type 1 65 -2666 1669 177 0 50 chr17 45688717 45688856 -39749624 + AluJo SINE Alu 1 145 -167 1571 201 10 3 chr17 45688856 45689149 -39749331 + AluJb SINE Alu 3 297 -15 1669 177 0 50 chr17 45689149 45689331 -39749149 + AluJo SINE Alu 145 306 -6 1835 128 48 37 chr17 45689331 45689501 -39748979 + MER46B DNA MER2_type 65 232 -4 2036 108 7 33 chr17 45690077 45690384 -39748096 + AluSx SINE Alu 1 299 -13 980 201 126 47 chr17 45691023 45691301 -39747179 + AluJo SINE Alu 3 302 0 1993 133 7 33 chr17 45691302 45691603 -39746877 + AluSx SINE Alu 1 293 -19 5441 176 69 118 chr17 45691711 45692527 -39745953 + L1M4 LINE L1 3617 4471 -1702 2276 117 3 0 chr17 45692527 45692826 -39745654 + AluSx SINE Alu 1 300 -12 5441 176 69 118 chr17 45692826 45692923 -39745557 + L1M4 LINE L1 4471 4571 -1602 1623 213 3 16 chr17 45692923 45693238 -39745242 + AluJo SINE Alu 1 311 -1 5441 176 69 118 chr17 45693238 45693571 -39744909 + L1M4 LINE L1 4571 4919 -1254 732 169 15 8 chr17 45693571 45693701 -39744779 + FLAM_C SINE Alu 1 131 -12 5441 176 69 118 chr17 45693701 45694156 -39744324 + L1M4 LINE L1 4919 5359 -814 1089 166 4 100 chr17 45694156 45694357 -39744123 + AluJo SINE Alu 54 226 -86 2411 95 0 0 chr17 45694357 45694662 -39743818 + AluSg1 SINE Alu 1 305 -4 1089 166 4 100 chr17 45694662 45694719 -39743761 + AluJo SINE Alu 226 287 -25 541 123 30 4 chr17 45694719 45694823 -39743657 + L1M LINE L1 5289 5400 -774 912 150 0 0 chr17 45694823 45694956 -39743524 + AluJb SINE Alu 1 133 -179 2211 111 6 16 chr17 45694956 45695271 -39743209 + AluSq SINE Alu 1 312 -1 241 189 36 171 chr17 45695407 45695457 -39743023 + MLT1B LTR MaLR 1 30 -360 1775 156 16 32 chr17 45695457 45695765 -39742715 + AluJo SINE Alu 1 303 -9 241 189 36 171 chr17 45695765 45695825 -39742655 + MLT1B LTR MaLR 30 96 -294 662 116 18 0 chr17 45695884 45695996 -39742484 + AluSg/x SINE Alu 182 295 -14 2171 100 0 42 chr17 45696018 45696327 -39742153 + AluSq SINE Alu 3 298 -15 2202 129 0 0 chr17 45696619 45696921 -39741559 - AluSx SINE Alu -10 302 1 2503 74 0 6 chr17 45697319 45697630 -39740850 + AluSc SINE Alu 1 309 0 492 319 85 27 chr17 45697870 45698130 -39740350 + L3 LINE CR1 1132 1406 -171 1541 104 40 5 chr17 45698418 45698640 -39739840 + MER30 DNA MER1_type 1 230 0 961 261 111 42 chr17 45699289 45699352 -39739128 - L1ME4a LINE L1 -217 5904 5847 2254 109 0 0 chr17 45699352 45699646 -39738834 - AluSc SINE Alu -15 294 1 961 261 111 42 chr17 45699646 45700125 -39738355 - L1ME4a LINE L1 -274 5847 5325 2306 75 0 26 chr17 45700403 45700735 -39737745 - AluY SINE Alu 0 311 1 2221 108 0 3 chr17 45700762 45701057 -39737423 + AluSx SINE Alu 1 294 -18 2398 89 0 3 chr17 45701499 45701803 -39736677 + AluSq SINE Alu 1 303 -10 383 218 89 8 chr17 45701995 45702119 -39736361 - L1MC/D LINE L1 -2342 5466 5333 768 80 0 0 chr17 45702199 45702299 -39736181 - HY3 scRNA scRNA -1 100 1 522 308 42 27 chr17 45702750 45702886 -39735594 - L2 LINE L2 -837 2477 2345 2248 113 3 0 chr17 45702886 45703197 -39735283 + AluSx SINE Alu 1 312 0 522 308 42 27 chr17 45703197 45703323 -39735157 - L2 LINE L2 -969 2345 2211 2179 84 52 0 chr17 45703458 45703744 -39734736 + AluSq SINE Alu 1 301 -12 817 131 8 157 chr17 45703901 45703950 -39734530 + MLT1B LTR MaLR 1 56 -334 1818 146 16 36 chr17 45703950 45704259 -39734221 + AluJo SINE Alu 1 303 -9 817 131 8 157 chr17 45704259 45704321 -39734159 + MLT1B LTR MaLR 56 126 -264 2001 148 17 0 chr17 45704321 45704611 -39733869 + AluSx SINE Alu 1 295 -17 817 131 8 157 chr17 45704611 45704734 -39733746 + MLT1B LTR MaLR 126 201 -189 1014 110 0 0 chr17 45704734 45704870 -39733610 + AluJb SINE Alu 1 136 -176 2108 134 0 3 chr17 45704870 45705168 -39733312 + AluSx SINE Alu 1 297 -15 749 200 73 12 chr17 45705210 45705375 -39733105 + MLT1B LTR MaLR 286 460 -7 602 232 6 42 chr17 45705403 45705571 -39732909 - MIR SINE MIR -24 238 77 2346 89 0 0 chr17 45705633 45705924 -39732556 + AluSx SINE Alu 6 296 -16 374 263 141 0 chr17 45705961 45706106 -39732374 - MIR SINE MIR -36 226 57 2030 102 58 14 chr17 45706106 45706401 -39732079 + AluSq SINE Alu 1 308 -5 1769 154 3 45 chr17 45706482 45706793 -39731687 - AluJb SINE Alu -14 298 1 2547 75 0 0 chr17 45706949 45707257 -39731223 + AluY SINE Alu 1 308 -3 2597 47 0 0 chr17 45707347 45707643 -39730837 - AluY SINE Alu -15 296 1 2085 126 0 3 chr17 45707829 45708115 -39730365 - AluSx SINE Alu -27 285 1 358 284 7 47 chr17 45708131 45708279 -39730201 - L1MC4a LINE L1 -1826 5982 5841 26 30 0 0 chr17 45709979 45710012 -39728468 + AT_rich Low_complexity Low_complexity 1 33 0 196 328 55 47 chr17 45711417 45711545 -39726935 + L3b LINE CR1 1439 1567 -16 25 0 0 0 chr17 45711660 45711685 -39726795 + AT_rich Low_complexity Low_complexity 1 25 0 38 0 0 0 chr17 45712134 45712172 -39726308 + GC_rich Low_complexity Low_complexity 1 38 0 32 57 0 0 chr17 45712297 45712350 -39726130 + GC_rich Low_complexity Low_complexity 1 53 0 216 122 0 0 chr17 45712634 45712675 -39725805 + (TCTCTG)n Simple_repeat Simple_repeat 3 43 0 236 343 68 32 chr17 45713268 45713487 -39724993 - L2 LINE L2 -914 2400 2174 2310 96 3 16 chr17 45713622 45713936 -39724544 + AluSx SINE Alu 1 310 -2 2060 85 100 0 chr17 45714021 45714302 -39724178 + AluSg SINE Alu 1 309 -1 379 144 22 56 chr17 45714384 45714474 -39724006 + MIR SINE MIR 119 205 -57 2436 72 3 3 chr17 45714478 45714784 -39723696 - AluY SINE Alu -5 306 1 1783 161 13 16 chr17 45714813 45715153 -39723327 + AluJb SINE Alu 1 312 0 2390 77 27 0 chr17 45715406 45715706 -39722774 + AluSc SINE Alu 1 308 -1 22 0 0 0 chr17 45715782 45715804 -39722676 + AT_rich Low_complexity Low_complexity 1 22 0 264 108 0 0 chr17 45715805 45715842 -39722638 - MER4E LTR ERV1 -76 703 667 181 242 0 0 chr17 45715909 45715942 -39722538 - L2 LINE L2 -25 3247 3215 1925 155 3 0 chr17 45716109 45716400 -39722080 + AluJo SINE Alu 1 292 -20 294 54 0 0 chr17 45716429 45716466 -39722014 + tRNA-Tyr-TAC tRNA tRNA 2 38 -38 277 278 176 19 chr17 45716659 45716767 -39721713 + MIR SINE MIR 63 187 -75 306 0 0 0 chr17 45716826 45716860 -39721620 + (TA)n Simple_repeat Simple_repeat 2 35 0 336 202 35 9 chr17 45717240 45717354 -39721126 - HAL1 LINE L1 -1420 1087 971 412 136 0 0 chr17 45717384 45717450 -39721030 - Alu SINE Alu -9 301 236 1627 168 0 7 chr17 45717451 45717725 -39720755 + AluJo SINE Alu 38 309 -3 232 362 121 0 chr17 45717728 45717844 -39720636 - L2 LINE L2 -21 3251 3122 250 275 21 39 chr17 45717989 45718030 -39720450 - MER5A DNA MER1_type -2 187 147 1866 148 3 75 chr17 45718030 45718156 -39720324 + AluSx SINE Alu 1 135 -177 2676 42 7 3 chr17 45718156 45718464 -39720016 - AluY SINE Alu -2 309 1 1866 148 3 75 chr17 45718464 45718669 -39719811 + AluSx SINE Alu 135 308 -4 250 275 21 39 chr17 45718669 45718769 -39719711 - MER5A DNA MER1_type -42 147 1 785 327 77 43 chr17 45718826 45719266 -39719214 - L2 LINE L2 -545 2769 2315 2363 88 7 0 chr17 45719294 45719589 -39718891 + AluSq SINE Alu 1 297 -16 2028 133 17 0 chr17 45719687 45719980 -39718500 + AluSx SINE Alu 1 298 -14 739 132 28 0 chr17 45719981 45720087 -39718393 + AluSx SINE Alu 2 110 -203 1509 117 0 0 chr17 45720131 45720327 -39718153 + AluSx SINE Alu 105 300 -10 359 178 22 33 chr17 45720327 45720417 -39718063 - AluJo/FLAM SINE Alu -172 130 42 759 236 6 6 chr17 45720483 45720644 -39717836 + FRAM SINE Alu 1 159 -17 446 210 57 45 chr17 45720652 45720710 -39717770 - HAL1 LINE L1 -1359 1148 1092 2180 138 0 0 chr17 45720710 45721015 -39717465 - AluSx SINE Alu -7 305 1 446 210 57 45 chr17 45721015 45721132 -39717348 - HAL1 LINE L1 -1415 1092 971 1288 135 0 96 chr17 45721160 45721344 -39717136 - AluSg/x SINE Alu -9 303 144 2279 116 13 0 chr17 45721344 45721647 -39716833 - AluSx SINE Alu 0 312 6 1288 135 0 96 chr17 45721647 45721691 -39716789 - AluSg/x SINE Alu -168 144 97 435 113 0 14 chr17 45721713 45721784 -39716696 - L1M4 LINE L1 -511 5667 5598 2875 208 39 58 chr17 45721786 45721854 -39716626 - L1M4 LINE L1 -1040 5106 5038 1454 98 0 56 chr17 45721854 45721899 -39716581 + AluSc SINE Alu 90 136 -173 2401 80 3 7 chr17 45721899 45722200 -39716280 + AluSp SINE Alu 1 300 -13 1454 98 0 56 chr17 45722200 45722369 -39716111 + AluSc SINE Alu 136 292 -17 2875 208 39 58 chr17 45722369 45722585 -39715895 - L1M4 LINE L1 -1108 5038 4819 1579 153 50 60 chr17 45722585 45722733 -39715747 + AluJb SINE Alu 1 149 -163 2264 105 3 3 chr17 45722733 45723027 -39715453 + AluSp SINE Alu 1 294 -19 1579 153 50 60 chr17 45723027 45723178 -39715302 + AluJb SINE Alu 149 297 -15 2875 208 39 58 chr17 45723178 45723682 -39714798 - L1M4 LINE L1 -1327 4819 4332 897 233 12 6 chr17 45723682 45723854 -39714626 + FAM SINE Alu 1 173 -2 2875 208 39 58 chr17 45723854 45723915 -39714565 - L1M4 LINE L1 -1814 4332 4271 2537 66 0 0 chr17 45723930 45724231 -39714249 + AluY SINE Alu 1 301 -10 369 191 76 9 chr17 45724307 45724412 -39714068 - L1M4 LINE L1 -1712 4434 4323 1662 121 9 0 chr17 45724414 45724646 -39713834 - AluSg1 SINE Alu 0 310 77 189 159 0 0 chr17 45724650 45724694 -39713786 + T-rich Low_complexity Low_complexity 1 44 0 5910 31 0 6 chr17 45724702 45725353 -39713127 - SVA Other Other 0 1386 740 685 130 0 0 chr17 45725353 45725445 -39713035 - AluSg1 SINE Alu -216 93 2 1297 206 21 0 chr17 45725449 45725731 -39712749 - L1M4 LINE L1 -1826 4320 4033 2004 115 0 81 chr17 45725740 45725892 -39712588 + AluSx SINE Alu 1 115 -197 2135 101 3 42 chr17 45725892 45726200 -39712280 + AluY SINE Alu 1 296 -15 2004 115 0 81 chr17 45726200 45726369 -39712111 + AluSx SINE Alu 115 296 -16 942 232 49 42 chr17 45726376 45726530 -39711950 + MLT1A2 LTR MaLR 88 239 -135 2801 159 2 58 chr17 45726530 45726703 -39711777 + MER66B LTR ERV1 1 182 -304 2245 108 0 0 chr17 45726703 45726991 -39711489 - AluSg SINE Alu -22 288 1 2801 159 2 58 chr17 45726991 45727227 -39711253 + MER66B LTR ERV1 182 378 -108 1949 136 39 7 chr17 45727227 45727513 -39710967 + AluSx SINE Alu 1 295 -17 2801 159 2 58 chr17 45727513 45727617 -39710863 + MER66B LTR ERV1 378 486 0 942 232 49 42 chr17 45727617 45727747 -39710733 + MLT1A2 LTR MaLR 239 374 0 26 0 0 0 chr17 45727870 45727896 -39710584 + AT_rich Low_complexity Low_complexity 1 26 0 1958 126 22 0 chr17 45727896 45728222 -39710258 + AluSx SINE Alu 1 332 0 730 153 7 62 chr17 45728223 45728367 -39710113 + FLAM_C SINE Alu 1 136 -7 2343 117 3 0 chr17 45728370 45728679 -39709801 + AluSp SINE Alu 1 310 -3 1733 167 6 45 chr17 45728775 45729087 -39709393 + AluJo SINE Alu 1 300 -12 2169 104 0 0 chr17 45729263 45729542 -39708938 - AluSg1 SINE Alu -1 308 30 1482 174 0 12 chr17 45729542 45729783 -39708697 - AluJb SINE Alu -45 267 30 1023 153 167 14 chr17 45729864 45730079 -39708401 - MER21B LTR ERV1 -615 248 1 249 254 101 80 chr17 45730088 45730226 -39708254 + L2 LINE L2 3171 3311 -2 342 230 32 8 chr17 45730334 45730460 -39708020 + GA-rich Low_complexity Low_complexity 4 132 0 672 207 6 11 chr17 45730471 45730650 -39707830 + GA-rich Low_complexity Low_complexity 1 178 0 221 140 60 0 chr17 45730676 45730726 -39707754 + A-rich Low_complexity Low_complexity 4 56 0 21 0 0 0 chr17 45730736 45730757 -39707723 + GC_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr17 45730843 45730877 -39707603 + GC_rich Low_complexity Low_complexity 1 34 0 228 67 0 0 chr17 45732915 45732945 -39705535 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 * 482 128 0 12 chr17 45732943 45733029 -39705451 + (GGGA)n Simple_repeat Simple_repeat 4 88 0 180 241 0 0 chr17 45733034 45733092 -39705388 + A-rich Low_complexity Low_complexity 109 166 0 696 258 91 10 chr17 45733139 45733337 -39705143 + MIR SINE MIR 49 262 0 514 294 75 7 chr17 45733531 45733677 -39704803 - L2 LINE L2 0 3272 3117 2112 107 0 0 chr17 45733886 45734188 -39704292 + AluSx SINE Alu 10 311 0 1822 155 18 58 chr17 45735363 45735654 -39702826 - L1ME1 LINE L1 -5 6161 5860 2251 109 7 0 chr17 45735654 45735947 -39702533 - AluSx SINE Alu -17 295 1 1822 155 18 58 chr17 45735947 45736007 -39702473 - L1ME1 LINE L1 -306 5860 5825 938 224 180 14 chr17 45736007 45736302 -39702178 - MER2 DNA MER2_type 0 344 1 1822 155 18 58 chr17 45736302 45736342 -39702138 - L1ME1 LINE L1 -341 5825 5785 886 139 0 0 chr17 45736342 45736464 -39702016 + AluSg/x SINE Alu 104 225 -87 334 339 109 9 chr17 45736480 45736710 -39701770 + L2 LINE L2 1852 2104 -1210 2163 98 31 3 chr17 45736938 45737224 -39701256 - AluSx SINE Alu -18 294 1 961 129 8 0 chr17 45737226 45737358 -39701122 - AluSq/x SINE Alu -180 133 1 3502 54 35 0 chr17 45737452 45737880 -39700600 + MLT2A1 LTR ERVL 1 443 -1 484 153 0 0 chr17 45737880 45737952 -39700528 + AluJ/FLAM SINE Alu 7 78 -234 364 255 11 0 chr17 45737952 45738144 -39700336 - AluJb SINE Alu 0 399 207 717 112 0 0 chr17 45738145 45738243 -39700237 + AluJo/FRAM SINE Alu 202 299 -13 413 195 278 24 chr17 45738304 45738386 -39700094 + MER20 DNA MER1_type 3 63 -156 2376 94 3 0 chr17 45738386 45738685 -39699795 - AluSp SINE Alu -13 300 1 413 195 278 24 chr17 45738685 45738771 -39699709 + MER20 DNA MER1_type 63 214 -5 986 167 13 0 chr17 45739342 45739492 -39698988 - AluSg/x SINE Alu -20 290 139 10334 54 26 47 chr17 45739501 45740916 -39697564 - SVA Other Other 0 1386 1 303 355 0 0 chr17 45741204 45741314 -39697166 + ERVL LTR ERVL 4372 4481 -1283 644 314 0 0 chr17 45741318 45741512 -39696968 + ERVL LTR ERVL 4777 4970 -794 359 40 0 20 chr17 45741515 45741565 -39696915 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 932 180 32 55 chr17 45741594 45741673 -39696807 - AluJb SINE Alu -100 212 133 2169 104 7 0 chr17 45741673 45741960 -39696520 - AluSg SINE Alu -16 294 6 185 0 40 0 chr17 45741960 45741985 -39696495 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2206 101 14 0 chr17 45741987 45742263 -39696217 - AluSx SINE Alu -32 280 1 932 180 32 55 chr17 45742263 45742396 -39696084 - AluJb SINE Alu -179 133 1 2395 95 3 3 chr17 45742488 45742793 -39695687 - AluSp SINE Alu -8 305 1 2560 66 0 0 chr17 45742799 45743102 -39695378 - AluY SINE Alu -8 303 1 1089 198 34 74 chr17 45743106 45743241 -39695239 + MLT1A1 LTR MaLR 26 165 -200 1989 113 0 48 chr17 45743241 45743551 -39694929 + AluSx SINE Alu 12 306 -6 1089 198 34 74 chr17 45743551 45743738 -39694742 + MLT1A1 LTR MaLR 165 335 -30 558 211 115 19 chr17 45744131 45744287 -39694193 + MIR SINE MIR 18 188 -74 2367 94 0 19 chr17 45744292 45744601 -39693879 + AluSx SINE Alu 1 303 -9 24 0 0 0 chr17 45744622 45744646 -39693834 + AT_rich Low_complexity Low_complexity 1 24 0 1747 175 3 26 chr17 45744659 45744962 -39693518 + AluJo SINE Alu 1 296 -16 1264 212 87 6 chr17 45744966 45745287 -39693193 - MLT1F1 LTR MaLR -33 534 188 1352 101 0 42 chr17 45745324 45745344 -39693136 + L1PB1 LINE L1 5662 5681 -470 2379 96 0 0 chr17 45745344 45745636 -39692844 - AluSc SINE Alu -17 292 1 1352 101 0 42 chr17 45745636 45745832 -39692648 + L1PB1 LINE L1 5681 5869 -282 2521 77 0 13 chr17 45745832 45746145 -39692335 - AluY SINE Alu -2 309 1 306 0 0 0 chr17 45746147 45746181 -39692299 + (T)n Simple_repeat Simple_repeat 1 34 0 2496 69 3 0 chr17 45747743 45748046 -39690434 - AluSp SINE Alu -5 308 5 2075 102 0 3 chr17 45748052 45748345 -39690135 + L1PB1 LINE L1 5858 6149 -2 465 278 25 37 chr17 45748368 45748530 -39689950 - MLT1F1 LTR MaLR -382 160 1 2266 105 0 3 chr17 45748544 45748840 -39689640 - AluSx SINE Alu -17 295 1 361 322 41 7 chr17 45748863 45749009 -39689471 + L1MC4 LINE L1 7892 8042 0 1993 168 0 0 chr17 45749074 45749377 -39689103 - AluSx SINE Alu -9 303 1 988 209 0 72 chr17 45749378 45749487 -39688993 - AluJo SINE Alu -94 218 133 231 36 0 0 chr17 45749487 45749515 -39688965 + (TTC)n Simple_repeat Simple_repeat 2 29 0 988 209 0 72 chr17 45749515 45749640 -39688840 - AluJo SINE Alu -179 133 1 1201 83 6 0 chr17 45749787 45749943 -39688537 + AluSp/q SINE Alu 157 313 0 1607 169 7 21 chr17 45750060 45750373 -39688107 + AluJb SINE Alu 3 311 0 2341 109 3 0 chr17 45750397 45750700 -39687780 + AluSx SINE Alu 1 304 -8 2350 103 3 0 chr17 45750700 45751002 -39687478 + AluSp SINE Alu 1 303 -10 874 120 0 0 chr17 45751007 45751124 -39687356 - AluSq/x SINE Alu -195 117 1 191 35 0 35 chr17 45751138 45751167 -39687313 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 649 155 164 0 chr17 45751274 45751390 -39687090 - FLAM_C SINE Alu -7 136 2 207 156 0 0 chr17 45751412 45751444 -39687036 + L2 LINE L2 3272 3303 -10 1099 103 6 6 chr17 45752374 45752548 -39685932 + (TTC)n Simple_repeat Simple_repeat 1 174 0 260 111 22 0 chr17 45752551 45752596 -39685884 + CT-rich Low_complexity Low_complexity 1 46 0 2056 133 16 10 chr17 45752596 45752905 -39685575 - AluJb SINE Alu -1 311 1 1698 121 0 0 chr17 45752943 45753174 -39685306 + AluSx SINE Alu 2 232 -80 21 36 0 0 chr17 45753972 45754000 -39684480 + GC_rich Low_complexity Low_complexity 1 28 0 221 207 60 9 chr17 45754044 45754160 -39684320 + (CCGCG)n Simple_repeat Simple_repeat 1 122 0 27 0 0 0 chr17 45754284 45754311 -39684169 + GC_rich Low_complexity Low_complexity 1 27 0 1257 94 6 6 chr17 45755021 45755192 -39683288 - AluSx SINE Alu -5 307 137 1086 88 0 7 chr17 45755303 45755440 -39683040 - AluSx SINE Alu -171 142 7 23 0 0 0 chr17 45756108 45756131 -39682349 + AT_rich Low_complexity Low_complexity 1 23 0 2250 70 42 0 chr17 45756379 45756663 -39681817 + AluSp SINE Alu 1 296 -17 24 0 0 0 chr17 45756695 45756719 -39681761 + AT_rich Low_complexity Low_complexity 1 24 0 2116 118 24 0 chr17 45757754 45758042 -39680438 + AluSg SINE Alu 1 295 -15 2188 115 0 50 chr17 45758288 45758609 -39679871 - AluSp SINE Alu -8 305 1 2055 135 3 3 chr17 45758898 45759187 -39679293 - AluSg SINE Alu -21 289 1 2362 100 0 3 chr17 45759534 45759843 -39678637 - AluSq SINE Alu -5 308 1 185 65 32 0 chr17 45760924 45760955 -39677525 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2404 92 3 16 chr17 45762002 45762318 -39676162 - AluSp SINE Alu 0 313 2 192 77 0 0 chr17 45762868 45762894 -39675586 + (TG)n Simple_repeat Simple_repeat 2 27 0 2384 84 3 0 chr17 45763022 45763318 -39675162 - AluSq SINE Alu -16 297 1 2253 121 0 10 chr17 45763918 45764232 -39674248 - AluJb SINE Alu -1 311 1 305 247 81 113 chr17 45764629 45764764 -39673716 - HAL1 LINE L1 -39 2468 2330 2134 128 30 3 chr17 45764764 45765069 -39673411 - AluSq SINE Alu 0 313 1 2198 108 3 7 chr17 45765077 45765373 -39673107 - AluSx SINE Alu -17 295 1 305 247 81 113 chr17 45765373 45765475 -39673005 - HAL1 LINE L1 -184 2323 2230 321 68 0 0 chr17 45765494 45765538 -39672942 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2248 111 0 0 chr17 45765540 45765829 -39672651 - AluSg1 SINE Alu -20 289 1 2271 124 0 0 chr17 45765919 45766225 -39672255 - AluSq SINE Alu -7 306 1 340 290 95 69 chr17 45766225 45766300 -39672180 - HAL1 LINE L1 -347 2160 2088 2292 135 0 0 chr17 45766300 45766611 -39671869 - AluSx SINE Alu -1 311 1 1818 177 23 0 chr17 45766617 45766922 -39671558 - AluJb SINE Alu 0 312 1 340 290 95 69 chr17 45766922 45767200 -39671280 - HAL1 LINE L1 -423 2084 1752 2128 122 30 0 chr17 45767218 45767514 -39670966 + AluSx SINE Alu 1 305 -7 743 151 24 32 chr17 45767520 45767646 -39670834 + FLAM_C SINE Alu 2 126 -7 1912 163 3 7 chr17 45767697 45768003 -39670477 - AluSx SINE Alu -7 305 1 682 276 102 0 chr17 45768047 45768312 -39670168 - HAL1 LINE L1 -849 1658 1367 329 229 167 10 chr17 45768362 45768458 -39670022 + L2 LINE L2 3203 3313 0 678 170 0 0 chr17 45768506 45768618 -39669862 - AluJo/FRAM SINE Alu -1 311 200 999 181 0 0 chr17 45768618 45768773 -39669707 - AluJo SINE Alu -73 239 85 2231 112 14 0 chr17 45768776 45769071 -39669409 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 45769142 45769170 -39669310 + AT_rich Low_complexity Low_complexity 1 28 0 2589 55 0 3 chr17 45769219 45769530 -39668950 - AluY SINE Alu -1 310 1 1827 162 0 32 chr17 45769534 45769849 -39668631 - AluJo SINE Alu -7 305 1 2216 123 3 0 chr17 45769964 45770265 -39668215 + AluSx SINE Alu 1 302 -10 300 279 13 0 chr17 45770267 45770346 -39668134 - L1ME LINE L1 -554 5616 5537 8110 71 2 1 chr17 45770741 45771709 -39666771 - LTR5 LTR ERVK 0 969 1 357 264 72 30 chr17 45771828 45771995 -39666485 - MER113 DNA MER1_type? -10 511 338 1787 149 21 18 chr17 45772008 45772290 -39666190 - AluJo SINE Alu -23 289 7 2230 119 0 6 chr17 45772356 45772668 -39665812 - AluSg SINE Alu 0 310 1 341 228 82 25 chr17 45772712 45772870 -39665610 - MER113 DNA MER1_type? -344 177 11 892 175 48 0 chr17 45775284 45775433 -39663047 - AluJb SINE Alu -19 293 134 2034 127 45 0 chr17 45775433 45775725 -39662755 - AluSx SINE Alu -7 305 1 892 175 48 0 chr17 45775725 45775741 -39662739 - AluJb SINE Alu -178 134 120 498 43 143 0 chr17 45775752 45775822 -39662658 - MER41B LTR ERV1 -385 250 171 2000 155 13 3 chr17 45775824 45776128 -39662352 - AluSx SINE Alu -5 307 1 1320 216 45 11 chr17 45776312 45776599 -39661881 - AluJb SINE Alu -15 297 1 21 0 0 0 chr17 45776624 45776645 -39661835 + AT_rich Low_complexity Low_complexity 1 21 0 936 110 0 0 chr17 45776649 45776767 -39661713 - AluSq/x SINE Alu -194 118 1 1641 179 4 0 chr17 45776977 45777266 -39661214 + AluJb SINE Alu 13 302 0 1648 173 18 7 chr17 45777266 45777543 -39660937 - AluJb SINE Alu -21 291 12 2005 121 43 0 chr17 45777593 45777874 -39660606 - AluSx SINE Alu -19 293 1 1178 174 9 129 chr17 45778775 45779115 -39659365 + AluSp SINE Alu 10 308 -5 2264 132 0 0 chr17 45779177 45779488 -39658992 + AluSx SINE Alu 1 311 -1 1390 158 51 59 chr17 45779964 45780073 -39658407 + Tigger3(Golem) DNA MER2_type 1 109 -2920 2434 107 0 3 chr17 45780073 45780382 -39658098 - AluSx SINE Alu -4 308 1 1390 158 51 59 chr17 45780382 45780656 -39657824 + Tigger3(Golem) DNA MER2_type 109 3029 0 26 30 0 0 chr17 45780842 45780875 -39657605 + AT_rich Low_complexity Low_complexity 1 33 0 2135 113 7 0 chr17 45781008 45781312 -39657168 - AluSq SINE Alu 0 306 1 246 62 0 0 chr17 45781997 45782029 -39656451 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 845 237 66 0 chr17 45785205 45785416 -39653064 + MIR SINE MIR 13 237 -25 2592 62 0 10 chr17 45785567 45785873 -39652607 + AluY SINE Alu 1 303 -8 235 325 60 36 chr17 45786100 45786266 -39652214 - L2 LINE L2 -430 2884 2715 319 280 26 83 chr17 45787190 45787229 -39651251 - L1ME4a LINE L1 -1 6120 6080 1934 177 3 0 chr17 45787229 45787540 -39650940 - AluJb SINE Alu 0 312 1 319 280 26 83 chr17 45787540 45787693 -39650787 - L1ME4a LINE L1 -41 6080 5939 992 111 30 0 chr17 45787766 45787901 -39650579 - AluSq/x SINE Alu -173 139 1 233 308 104 33 chr17 45787922 45788104 -39650376 + L1ME4a LINE L1 5882 6076 -45 1866 168 13 7 chr17 45788438 45788741 -39649739 + AluJb SINE Alu 4 308 -4 479 256 94 31 chr17 45789205 45789365 -39649115 - MER5A DNA MER1_type 0 189 20 1924 152 7 3 chr17 45790631 45790920 -39647560 + AluJb SINE Alu 2 291 -21 23 0 0 0 chr17 45790922 45790945 -39647535 + AT_rich Low_complexity Low_complexity 1 23 0 263 250 0 16 chr17 45793691 45793755 -39644725 + CT-rich Low_complexity Low_complexity 1 63 0 2439 57 94 99 chr17 45794064 45794108 -39644372 + L1MA2 LINE L1 5871 5914 -390 2510 43 0 30 chr17 45794108 45794409 -39644071 + AluY SINE Alu 1 292 -19 2439 57 94 99 chr17 45794409 45794612 -39643868 + L1MA2 LINE L1 5914 6116 -188 2191 75 79 0 chr17 45794612 45794890 -39643590 + AluSq SINE Alu 1 300 -13 2509 78 0 0 chr17 45794893 45795202 -39643278 + AluY SINE Alu 1 309 -2 2439 57 94 99 chr17 45795202 45795385 -39643095 + L1MA2 LINE L1 6118 6304 0 2192 135 3 0 chr17 45795625 45795936 -39642544 + AluSx SINE Alu 1 312 0 2315 76 0 0 chr17 45796005 45796280 -39642200 + AluY SINE Alu 1 275 -36 222 37 0 0 chr17 45796283 45796310 -39642170 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 605 183 78 0 chr17 45796311 45796426 -39642054 + MER3 DNA MER1_type 1 124 -85 1175 121 23 0 chr17 45796793 45796966 -39641514 - AluSg/x SINE Alu -15 297 121 2493 101 0 16 chr17 45796966 45797284 -39641196 - AluSq SINE Alu 0 313 1 2469 77 0 0 chr17 45797389 45797688 -39640792 + AluY SINE Alu 1 299 -12 234 314 93 0 chr17 45798400 45798518 -39639962 - MER5B DNA MER1_type 0 178 50 3030 61 3 0 chr17 45798555 45798918 -39639562 - THE1B LTR MaLR 0 364 1 1693 170 0 7 chr17 45798918 45799194 -39639286 - AluJb SINE Alu -38 274 1 261 170 21 0 chr17 45799207 45799254 -39639226 + MER5B DNA MER1_type 126 173 -5 2344 111 0 0 chr17 45799255 45799553 -39638927 + AluSx SINE Alu 1 298 -14 308 287 134 13 chr17 45799577 45799734 -39638746 + L3 LINE CR1 278 453 -1124 2517 106 34 14 chr17 45800036 45800393 -39638087 - THE1B LTR MaLR 0 364 1 299 204 68 23 chr17 45800945 45801033 -39637447 - MER5B DNA MER1_type -35 143 52 257 309 85 36 chr17 45801054 45801219 -39637261 + MIR SINE MIR 25 197 -65 2211 136 3 0 chr17 45801596 45801904 -39636576 + AluSx SINE Alu 1 309 -3 635 177 0 0 chr17 45802307 45802403 -39636077 + FLAM_A SINE Alu 1 96 -46 341 75 19 0 chr17 45802404 45802457 -39636023 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 457 262 96 70 chr17 45802675 45802904 -39635576 + L1MC/D LINE L1 5574 5808 -2000 2056 147 0 3 chr17 45803081 45803380 -39635100 + AluJb SINE Alu 1 298 -14 22 0 0 0 chr17 45803923 45803945 -39634535 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr17 45805608 45805631 -39632849 + (A)n Simple_repeat Simple_repeat 1 23 0 1155 193 0 27 chr17 45808740 45808963 -39629517 + AluJo SINE Alu 84 300 -12 204 163 0 0 chr17 45809450 45809493 -39628987 + T-rich Low_complexity Low_complexity 1 43 0 183 139 0 0 chr17 45809647 45809683 -39628797 + (T)n Simple_repeat Simple_repeat 1 36 0 194 105 26 0 chr17 45810821 45810859 -39627621 + A-rich Low_complexity Low_complexity 4 42 0 709 237 80 58 chr17 45813169 45813443 -39625037 - MER102b DNA MER1_type -12 329 50 251 198 48 203 chr17 45815502 45815611 -39622869 + MER5B DNA MER1_type 4 68 -110 572 227 109 0 chr17 45815611 45815730 -39622750 - FLAM_A SINE Alu -1 132 1 251 198 48 203 chr17 45815730 45815827 -39622653 + MER5B DNA MER1_type 68 178 0 1675 161 43 26 chr17 45815905 45816209 -39622271 - MER2 DNA MER2_type -25 320 12 1891 138 27 10 chr17 45816243 45816540 -39621940 - AluSx SINE Alu -10 302 1 337 309 235 15 chr17 45817055 45817259 -39621221 + MIR SINE MIR 4 252 -10 619 252 25 46 chr17 45820203 45820441 -39618039 - L1M4 LINE L1 -1520 4626 4394 1102 96 0 6 chr17 45820441 45820597 -39617883 + MST-int LTR MaLR 78 232 -1419 787 235 83 0 chr17 45820617 45820847 -39617633 - L1M4 LINE L1 -1778 4368 4120 315 0 0 0 chr17 45821404 45821439 -39617041 + (TG)n Simple_repeat Simple_repeat 2 36 0 2347 62 14 0 chr17 45821442 45821732 -39616748 - AluY SINE Alu -17 294 1 587 292 67 33 chr17 45821836 45822076 -39616404 - MIR SINE MIR -6 256 9 285 361 56 7 chr17 45822867 45823011 -39615469 + MIR3 SINE MIR 10 160 -48 273 254 122 66 chr17 45823011 45823192 -39615288 - MER117 DNA MER1_type 0 197 7 221 244 111 44 chr17 45824686 45824776 -39613704 + MER91C DNA MER1_type 6 101 -39 1802 169 23 7 chr17 45825780 45826087 -39612393 + AluJb SINE Alu 1 312 0 2329 95 7 3 chr17 45826087 45826393 -39612087 + AluSg SINE Alu 1 307 -3 945 161 6 58 chr17 45826859 45827033 -39611447 + MER58A DNA MER1_type 48 212 -12 1528 197 16 25 chr17 45827035 45827350 -39611130 + AluJo SINE Alu 1 312 0 1606 184 0 3 chr17 45827456 45827738 -39610742 - AluJb SINE Alu -31 281 1 2027 121 10 10 chr17 45827820 45828125 -39610355 + AluSq SINE Alu 6 310 -3 2163 109 41 0 chr17 45828771 45829064 -39609416 - AluSg SINE Alu -5 305 1 519 185 0 0 chr17 45829064 45829145 -39609335 - AluS SINE Alu -231 82 2 464 304 12 12 chr17 45829145 45829316 -39609164 - Charlie2 DNA MER1_type -2576 286 116 2254 105 3 3 chr17 45829450 45829746 -39608734 - AluSx SINE Alu -16 296 1 180 263 70 18 chr17 45831588 45831645 -39606835 - L2 LINE L2 -217 3055 2996 1869 124 4 0 chr17 45831891 45832164 -39606316 + AluSx SINE Alu 39 312 0 1542 165 15 79 chr17 45832193 45832521 -39605959 + AluJo SINE Alu 1 307 -5 2243 93 16 19 chr17 45832521 45832834 -39605646 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr17 45832946 45832967 -39605513 + AT_rich Low_complexity Low_complexity 1 21 0 2056 69 65 14 chr17 45832971 45833248 -39605232 - AluY SINE Alu -20 291 1 696 158 96 34 chr17 45833505 45833651 -39604829 + FRAM SINE Alu 10 164 -12 1595 113 0 5 chr17 45833655 45833868 -39604612 - AluSx SINE Alu -100 212 1 978 274 48 48 chr17 45833889 45834302 -39604178 + L2 LINE L2 2540 2952 -362 2264 89 10 0 chr17 45834370 45834663 -39603817 - AluY SINE Alu -15 296 1 2448 81 0 3 chr17 45834696 45835003 -39603477 + AluSq SINE Alu 1 306 -7 330 274 92 102 chr17 45835261 45835508 -39602972 + L1M4 LINE L1 4749 4994 -1152 2160 125 3 3 chr17 45835508 45835813 -39602667 - AluSx SINE Alu -7 305 1 330 274 92 102 chr17 45835813 45835868 -39602612 + L1M4 LINE L1 4994 5048 -1098 642 176 208 13 chr17 45835879 45836038 -39602442 + MIR SINE MIR 2 191 -71 240 323 91 0 chr17 45836185 45836284 -39602196 + MIR SINE MIR 84 191 -71 625 184 101 19 chr17 45836357 45836515 -39601965 - MER20 DNA MER1_type -45 174 4 1096 242 71 65 chr17 45836702 45837198 -39601282 + L1MC5 LINE L1 6881 7379 -582 557 314 177 29 chr17 45837375 45837760 -39600720 + L1MEc LINE L1 32 473 -5923 198 0 0 0 chr17 45838225 45838247 -39600233 + (CA)n Simple_repeat Simple_repeat 2 23 0 * 297 0 0 0 chr17 45838246 45838279 -39600201 + (TC)n Simple_repeat Simple_repeat 1 33 0 1519 131 23 0 chr17 45838342 45838563 -39599917 + AluSg/x SINE Alu 87 312 0 2224 109 0 28 chr17 45838823 45839134 -39599346 + AluSx SINE Alu 1 304 -8 261 0 0 0 chr17 45839134 45839163 -39599317 + (GA)n Simple_repeat Simple_repeat 2 30 0 838 168 132 12 chr17 45839224 45839391 -39599089 - AluSg/x SINE Alu -25 284 98 310 27 0 0 chr17 45839391 45839428 -39599052 + AluSc SINE Alu 242 278 -21 227 137 78 0 chr17 45839898 45839949 -39598531 + Charlie7 DNA MER1_type 2440 2494 -118 23 54 0 0 chr17 45840765 45840802 -39597678 + AT_rich Low_complexity Low_complexity 1 37 0 2407 96 0 0 chr17 45841306 45841618 -39596862 + AluSx SINE Alu 1 312 0 2233 112 0 3 chr17 45841852 45842156 -39596324 - AluSc SINE Alu -6 303 1 2335 87 0 0 chr17 45842266 45842574 -39595906 + AluSx SINE Alu 1 308 0 340 315 130 25 chr17 45842705 45842867 -39595613 + L2 LINE L2 3131 3309 -4 21 0 0 0 chr17 45843395 45843416 -39595064 + AT_rich Low_complexity Low_complexity 1 21 0 237 33 0 0 chr17 45843552 45843582 -39594898 + (A)n Simple_repeat Simple_repeat 1 30 0 924 239 42 82 chr17 45843887 45844339 -39594141 + L2 LINE L2 1746 2179 -1135 658 26 0 0 chr17 45844383 45844460 -39594020 - L1PA3 LINE L1 -1 6154 6078 1610 181 23 19 chr17 45844460 45844769 -39593711 - AluJb SINE Alu -2 310 1 525 250 76 16 chr17 45844769 45844953 -39593527 + L2 LINE L2 3119 3313 0 379 338 126 4 chr17 45844975 45845206 -39593274 - MIR SINE MIR 0 262 4 1590 193 25 3 chr17 45845373 45845658 -39592822 - AluJo SINE Alu -21 291 1 309 266 171 57 chr17 45845802 45845960 -39592520 + MER5B DNA MER1_type 1 176 -2 200 135 58 19 chr17 45846263 45846315 -39592165 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 827 150 0 24 chr17 45847328 45847455 -39591025 + FLAM_C SINE Alu 1 124 -9 1920 136 7 23 chr17 45847782 45848091 -39590389 + AluJb SINE Alu 1 304 -8 1951 153 0 7 chr17 45848433 45848728 -39589752 - AluSx SINE Alu -19 293 1 1911 125 7 4 chr17 45848963 45849235 -39589245 + AluSx SINE Alu 1 273 -39 202 27 0 54 chr17 45849246 45849283 -39589197 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 450 188 16 31 chr17 45852951 45853079 -39585401 + L1MC4a LINE L1 5929 6054 -1754 1493 205 151 116 chr17 45853082 45854069 -39584411 + L1MC4a LINE L1 6116 7284 -539 1075 164 26 10 chr17 45854069 45854306 -39584174 + AluJb SINE Alu 85 324 0 1493 205 151 116 chr17 45854306 45854830 -39583650 + L1MC4a LINE L1 7284 7788 -35 1994 114 36 0 chr17 45854846 45855127 -39583353 - AluSx SINE Alu -21 291 1 1403 234 98 77 chr17 45855618 45855709 -39582771 - L1M4 LINE L1 -1393 4753 4665 2335 96 0 3 chr17 45855709 45856012 -39582468 + AluSx SINE Alu 1 302 -10 1403 234 98 77 chr17 45856012 45856553 -39581927 - L1M4 LINE L1 -1481 4665 4102 1678 189 0 3 chr17 45856553 45856849 -39581631 - AluJb SINE Alu -17 295 1 1403 234 98 77 chr17 45856849 45856942 -39581538 - L1M4 LINE L1 -2044 4102 4012 2351 103 0 0 chr17 45857054 45857354 -39581126 - AluSx SINE Alu -12 300 1 370 213 62 44 chr17 45857430 45857590 -39580890 - L1ME LINE L1 -5374 696 534 344 300 11 139 chr17 45857772 45858052 -39580428 - L1ME LINE L1 -5540 530 287 688 271 78 55 chr17 45858784 45859167 -39579313 + LTR37B LTR ERV1 1 392 -76 1911 173 0 0 chr17 45859197 45859503 -39578977 + AluJb SINE Alu 6 311 -1 230 116 23 0 chr17 45859503 45859546 -39578934 + GA-rich Low_complexity Low_complexity 1 44 0 772 115 0 0 chr17 45859730 45859834 -39578646 + FRAM SINE Alu 67 170 -6 186 189 351 0 chr17 45861608 45861682 -39576798 - MIR SINE MIR -88 120 21 271 242 116 32 chr17 45862924 45863019 -39575461 + MER5A DNA MER1_type 37 139 -50 640 192 0 0 chr17 45863091 45863195 -39575285 - FLAM_A SINE Alu -37 105 2 1943 127 0 11 chr17 45863604 45863903 -39574577 + AluSx SINE Alu 11 306 0 1908 120 60 20 chr17 45863915 45864216 -39574264 + AluSq SINE Alu 1 313 0 1774 185 0 7 chr17 45864991 45865288 -39573192 - AluJb SINE Alu -17 295 1 824 169 0 7 chr17 45865288 45865424 -39573056 - AluJb SINE Alu -177 135 1 984 192 74 30 chr17 45866168 45866371 -39572109 + AluJo SINE Alu 1 212 -100 983 153 6 6 chr17 45866396 45866559 -39571921 - AluJb SINE Alu -145 167 5 280 314 76 9 chr17 45866574 45866679 -39571801 - L2 LINE L2 -782 2532 2421 255 258 114 45 chr17 45866941 45867073 -39571407 - L2 LINE L2 -2 3311 3171 21 0 0 0 chr17 45867199 45867220 -39571260 + AT_rich Low_complexity Low_complexity 1 21 0 1320 174 0 69 chr17 45868116 45868392 -39570088 + AluJo SINE Alu 31 287 -25 255 282 14 11 chr17 45869233 45869381 -39569099 + MIR SINE MIR 64 261 -1 1436 226 77 9 chr17 45869450 45869880 -39568600 + MLT1C LTR MaLR 9 467 0 343 292 0 73 chr17 45869952 45870141 -39568339 - MIR SINE MIR -64 198 25 5681 135 76 48 chr17 45870187 45871281 -39567199 + Tigger3b DNA MER2_type 1 1062 -1966 305 62 21 0 chr17 45871281 45871329 -39567151 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1956 76 7 66 chr17 45871330 45871631 -39566849 - AluSx SINE Alu -29 283 1 5681 135 76 48 chr17 45871631 45871728 -39566752 + Tigger3b DNA MER2_type 1061 1228 -3 628 229 47 0 chr17 45872282 45872452 -39566028 + MER104 DNA MER2_type 3 180 0 205 231 19 0 chr17 45872478 45872530 -39565950 + (TA)n Simple_repeat Simple_repeat 1 53 0 195 256 0 0 chr17 45873310 45873349 -39565131 + L2 LINE L2 3186 3224 -89 318 186 0 0 chr17 45873372 45873431 -39565049 + HsTC2 DNA Tc2 1840 1898 0 1873 177 3 0 chr17 45873598 45873892 -39564588 - AluJb SINE Alu -17 295 1 279 281 92 5 chr17 45874732 45874928 -39563552 + L1ME3A LINE L1 4544 4756 -1390 497 313 112 65 chr17 45875313 45875632 -39562848 + L1ME3A LINE L1 5318 5621 -549 901 191 116 92 chr17 45875632 45875798 -39562682 - AluJo SINE Alu -1 301 140 2413 77 3 16 chr17 45875798 45876111 -39562369 - AluSp SINE Alu -4 309 1 2380 66 3 0 chr17 45876120 45876408 -39562072 - AluY SINE Alu -22 289 1 901 191 116 92 chr17 45876408 45876525 -39561955 - AluJo SINE Alu -169 133 1 497 313 112 65 chr17 45876525 45876761 -39561719 + L1ME3A LINE L1 5621 5899 -271 2688 32 0 3 chr17 45878533 45878845 -39559635 + AluY SINE Alu 1 311 0 1235 124 0 43 chr17 45879743 45879953 -39558527 + AluSg/x SINE Alu 99 299 -13 2354 89 0 16 chr17 45880961 45881274 -39557206 + AluSg SINE Alu 1 308 -2 2222 116 0 0 chr17 45881748 45882040 -39556440 - AluSx SINE Alu -20 292 1 235 378 170 17 chr17 45882222 45882463 -39556017 - L2 LINE L2 -5 3267 2990 608 214 83 16 chr17 45882758 45883010 -39555470 - L1MC5 LINE L1 -84 7877 7609 2133 128 0 7 chr17 45883234 45883539 -39554941 + AluSx SINE Alu 1 303 -9 2213 108 14 3 chr17 45884307 45884603 -39553877 - AluSq SINE Alu -14 299 1 2076 136 7 0 chr17 45884825 45885126 -39553354 + AluSq SINE Alu 1 303 -10 1434 122 5 14 chr17 45885135 45885356 -39553124 + AluJb SINE Alu 59 277 -35 513 0 0 0 chr17 45885356 45885413 -39553067 + (CA)n Simple_repeat Simple_repeat 1 57 0 274 292 10 31 chr17 45885589 45885685 -39552795 + MIR SINE MIR 3 96 -166 2453 82 0 0 chr17 45885849 45886154 -39552326 - AluSx SINE Alu -7 305 1 1385 271 3 21 chr17 45886328 45886716 -39551764 + L1MDb LINE L1 13 393 -6016 2772 244 158 37 chr17 45886716 45888113 -39550367 + L2 LINE L2 1741 3304 -9 1685 195 10 7 chr17 45888417 45888709 -39549771 - AluJo SINE Alu -19 293 1 779 254 41 27 chr17 45889788 45890008 -39548472 - MIR SINE MIR -17 245 23 2040 122 7 3 chr17 45890684 45890971 -39547509 - AluSx SINE Alu -24 288 1 227 371 0 0 chr17 45891160 45891284 -39547196 + L1 LINE L1 4886 5009 -1137 2201 132 0 3 chr17 45891549 45891859 -39546621 + AluSq SINE Alu 4 312 -1 2013 132 7 0 chr17 45891863 45892143 -39546337 + AluSx SINE Alu 1 282 -30 216 0 0 0 chr17 45892146 45892170 -39546310 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2315 95 3 0 chr17 45892185 45892481 -39545999 - AluSp SINE Alu -16 297 1 637 157 197 7 chr17 45892543 45892690 -39545790 + MER20 DNA MER1_type 45 219 0 315 282 8 92 chr17 45893365 45893496 -39544984 - MIR3 SINE MIR -15 193 74 2170 95 7 0 chr17 45893540 45893835 -39544645 + AluSg SINE Alu 1 297 -13 2096 135 3 0 chr17 45894512 45894815 -39543665 - AluSq SINE Alu -9 304 1 2222 89 0 0 chr17 45895707 45895999 -39542481 + AluY SINE Alu 2 293 -18 636 295 54 9 chr17 45896485 45896802 -39541678 + MLT1G LTR MaLR 9 349 -206 396 283 14 55 chr17 45896817 45896962 -39541518 + L2 LINE L2 3171 3309 -4 22 35 0 0 chr17 45897172 45897201 -39541279 + AT_rich Low_complexity Low_complexity 1 29 0 228 212 41 151 chr17 45897453 45897599 -39540881 + L1ME LINE L1 5563 5692 -429 234 292 236 6 chr17 45897668 45897846 -39540634 + Charlie8 DNA MER1_type 31 249 -2168 687 185 6 70 chr17 45897950 45898107 -39540373 - MER5A DNA MER1_type -37 152 6 562 271 63 41 chr17 45898545 45898766 -39539714 - MIR SINE MIR -9 253 28 1986 116 51 7 chr17 45898770 45899063 -39539417 - AluSx SINE Alu -6 306 1 201 263 172 0 chr17 45899092 45899191 -39539289 + L2 LINE L2 2328 2443 -871 379 207 167 3 chr17 45900072 45900282 -39538198 - L1MC2 LINE L1 0 7785 6067 1298 249 154 43 chr17 45900365 45901132 -39537348 + L2 LINE L2 2339 3191 -122 1897 134 73 3 chr17 45901219 45901561 -39536919 - MER47A DNA MER2_type 0 366 1 9164 137 76 118 chr17 45902038 45902555 -39535925 + Tigger1 DNA MER2_type 23 560 -1858 2182 113 0 0 chr17 45902555 45902848 -39535632 + AluSx SINE Alu 5 297 -15 9164 137 76 118 chr17 45902848 45903573 -39534907 + Tigger1 DNA MER2_type 560 1314 -1104 907 138 0 0 chr17 45903573 45903711 -39534769 + FLAM_C SINE Alu 1 138 -5 9164 137 76 118 chr17 45903711 45904474 -39534006 + Tigger1 DNA MER2_type 1314 2049 -369 689 38 28 9 chr17 45904474 45904580 -39533900 + (GGGA)n Simple_repeat Simple_repeat 1 108 0 9164 137 76 118 chr17 45904580 45904936 -39533544 + Tigger1 DNA MER2_type 2049 2418 0 389 302 148 6 chr17 45905364 45905533 -39532947 - MIR SINE MIR -52 210 18 2173 84 46 0 chr17 45905627 45905912 -39532568 + AluSq SINE Alu 1 298 -15 251 143 102 0 chr17 45906853 45906902 -39531578 + U7 snRNA snRNA 2 55 -8 1751 148 3 24 chr17 45906950 45907247 -39531233 + AluJb SINE Alu 5 295 -17 794 191 0 0 chr17 45907441 45907572 -39530908 - FLAM_C SINE Alu -2 131 1 821 285 140 55 chr17 45907770 45908555 -39529925 - L2 LINE L2 -1 3312 2469 532 212 47 135 chr17 45909316 45909360 -39529120 + MER5B DNA MER1_type 1 47 -131 1908 164 0 3 chr17 45909360 45909664 -39528816 + AluJb SINE Alu 1 303 -9 532 212 47 135 chr17 45909664 45909812 -39528668 + MER5B DNA MER1_type 47 176 -2 217 361 111 9 chr17 45911045 45911153 -39527327 - L2 LINE L2 -32 3240 3122 2135 134 0 7 chr17 45911302 45911601 -39526879 + AluSc SINE Alu 1 297 -12 398 265 272 6 chr17 45911674 45911836 -39526644 + MIR SINE MIR 57 261 -1 183 226 97 32 chr17 45911845 45911904 -39526576 - L3 LINE CR1 -2 1575 1513 716 224 79 0 chr17 45911904 45912056 -39526424 + MER5A DNA MER1_type 2 165 -24 393 345 39 14 chr17 45912281 45912562 -39525918 - L1ME LINE L1 -441 5680 5393 1938 158 0 25 chr17 45912629 45912946 -39525534 - AluJo SINE Alu -3 309 1 28 48 0 0 chr17 45912949 45912991 -39525489 + AT_rich Low_complexity Low_complexity 1 42 0 3339 107 27 94 chr17 45912991 45913150 -39525330 - L1MA2 LINE L1 0 6304 6136 513 0 41 14 chr17 45913150 45913223 -39525257 + (TTTTA)n Simple_repeat Simple_repeat 2 76 0 2348 48 0 31 chr17 45913223 45913516 -39524964 - AluY SINE Alu -27 284 1 3339 107 27 94 chr17 45913516 45914017 -39524463 - L1MA2 LINE L1 -166 6138 5687 26 30 0 0 chr17 45914536 45914569 -39523911 + AT_rich Low_complexity Low_complexity 1 33 0 471 179 0 12 chr17 45914570 45914654 -39523826 - FLAM_A SINE Alu -27 115 33 2424 83 0 3 chr17 45915065 45915377 -39523103 + AluY SINE Alu 1 311 0 2078 130 0 0 chr17 45916570 45916869 -39521611 + AluSx SINE Alu 1 299 -13 207 0 0 0 chr17 45917026 45917049 -39521431 + (CA)n Simple_repeat Simple_repeat 1 23 0 1946 147 0 3 chr17 45917065 45917364 -39521116 + AluJo SINE Alu 1 298 -14 270 242 16 0 chr17 45918381 45918443 -39520037 + L2 LINE L2 3210 3272 0 926 200 0 0 chr17 45918472 45918632 -39519848 - FRAM SINE Alu -6 160 1 359 294 147 25 chr17 45918718 45918881 -39519599 - L1M4 LINE L1 -2980 3166 2984 1526 183 35 0 chr17 45918911 45919200 -39519280 - AluJb SINE Alu -13 299 1 320 232 0 14 chr17 45919798 45919867 -39518613 - L1ME4a LINE L1 -17 6104 6037 211 333 132 26 chr17 45920053 45920167 -39518313 - L2 LINE L2 -14 3258 3133 201 258 125 62 chr17 45920939 45921067 -39517413 - L2 LINE L2 -213 3059 2924 1128 182 111 77 chr17 45922201 45922362 -39516118 + MLT1B LTR MaLR 6 160 -230 2203 97 3 10 chr17 45922362 45922671 -39515809 - AluSg SINE Alu -3 307 1 1128 182 111 77 chr17 45922671 45922871 -39515609 + MLT1B LTR MaLR 160 379 -11 321 267 12 0 chr17 45924062 45924148 -39514332 + MIR SINE MIR 76 162 -100 256 254 95 116 chr17 45924658 45924847 -39513633 + MER5A DNA MER1_type 3 187 -2 1924 91 0 143 chr17 45925072 45925435 -39513045 - AluSx SINE Alu -1 311 1 896 129 0 0 chr17 45925483 45925607 -39512873 - FLAM_C SINE Alu -8 125 2 278 333 21 0 chr17 45925812 45925908 -39512572 + MIR SINE MIR 49 146 -116 225 121 0 0 chr17 45925911 45925944 -39512536 + Alu SINE Alu 136 168 -135 2022 117 0 0 chr17 45926456 45926737 -39511743 + AluSx SINE Alu 22 302 -10 2273 92 0 7 chr17 45927238 45927542 -39510938 - AluSq SINE Alu -11 302 1 203 189 0 0 chr17 45927973 45928010 -39510470 + T-rich Low_complexity Low_complexity 1 37 0 2329 86 0 3 chr17 45928063 45928367 -39510113 + AluSq SINE Alu 1 303 -10 1718 119 66 28 chr17 45929531 45929817 -39508663 - AluSx SINE Alu -15 297 1 2479 55 0 3 chr17 45930471 45930780 -39507700 - AluY SINE Alu -3 308 1 243 0 0 0 chr17 45931235 45931262 -39507218 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 669 144 0 0 chr17 45931264 45931368 -39507112 - AluJ SINE Alu -30 282 179 820 143 0 0 chr17 45931379 45931505 -39506975 - AluJ SINE Alu -186 126 1 216 149 0 0 chr17 45932177 45932224 -39506256 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 268 328 142 8 chr17 45934265 45934399 -39504081 - MER5A DNA MER1_type 0 189 38 562 234 39 26 chr17 45934511 45934665 -39503815 - MER103 DNA DNA -10 156 1 2099 115 0 7 chr17 45934823 45935127 -39503353 - AluSx SINE Alu -10 302 1 555 237 30 0 chr17 45935712 45935847 -39502633 + MIR SINE MIR 36 174 -88 334 190 150 10 chr17 45937471 45937571 -39500909 + MIR3 SINE MIR 68 181 -27 2091 94 4 0 chr17 45937814 45938091 -39500389 - AluSg SINE Alu -17 293 16 1645 153 56 17 chr17 45938103 45938391 -39500089 - AluJo SINE Alu -3 309 11 2022 126 0 23 chr17 45939622 45939931 -39498549 - AluSx SINE Alu -10 302 1 2164 98 7 0 chr17 45941130 45941427 -39497053 - AluSq SINE Alu -14 299 1 420 333 13 13 chr17 45942221 45942374 -39496106 + MIR SINE MIR 100 252 -10 323 313 9 27 chr17 45946159 45946271 -39492209 + MIR3 SINE MIR 79 188 -20 785 254 86 63 chr17 45947235 45947629 -39490851 + MLT1J LTR MaLR 109 511 0 197 336 47 19 chr17 45949166 45949273 -39489207 - L2 LINE L2 -21 3292 3183 495 259 47 57 chr17 45949369 45949562 -39488918 + MIR SINE MIR 16 206 -56 431 202 8 0 chr17 45949719 45949838 -39488642 + (TGGA)n Simple_repeat Simple_repeat 3 122 0 226 305 11 23 chr17 45949846 45950020 -39488460 + (TATATG)n Simple_repeat Simple_repeat 6 177 0 * 298 303 12 6 chr17 45949895 45950238 -39488242 + (TATG)n Simple_repeat Simple_repeat 1 166 0 * 938 215 11 0 chr17 45949971 45950325 -39488155 + (TGGA)n Simple_repeat Simple_repeat 1 359 0 519 179 6 19 chr17 45950339 45950501 -39487979 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 569 205 4 4 chr17 45950538 45950804 -39487676 + (TGGA)n Simple_repeat Simple_repeat 1 266 0 835 286 0 17 chr17 45951108 45951339 -39487141 + MIR SINE MIR 36 262 0 356 314 21 21 chr17 45951618 45951758 -39486722 + MLT1J LTR MaLR 1 140 -371 216 86 0 0 chr17 45951930 45951965 -39486515 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 318 263 13 0 chr17 45951974 45952050 -39486430 - MER58 DNA MER1_type -128 87 11 215 176 0 39 chr17 45953318 45953369 -39485111 + (CATATA)n Simple_repeat Simple_repeat 5 53 0 1938 158 0 3 chr17 45953540 45953844 -39484636 - AluJo SINE Alu -9 303 1 657 178 56 2 chr17 45953856 45954003 -39484477 - L1MC3 LINE L1 0 8042 7645 2003 101 0 0 chr17 45954434 45954711 -39483769 + AluSx SINE Alu 1 277 -35 2283 87 0 0 chr17 45954711 45955000 -39483480 - AluSg SINE Alu -21 289 1 285 318 26 20 chr17 45955295 45955446 -39483034 + GA-rich Low_complexity Low_complexity 3 154 0 1857 137 10 13 chr17 45955446 45955752 -39482728 - AluJo SINE Alu -7 305 1 1323 14 0 0 chr17 45955780 45955962 -39482518 + L1PA5 LINE L1 5993 6174 0 1980 146 10 0 chr17 45957197 45957506 -39480974 - AluJo SINE Alu 0 312 1 2204 113 3 0 chr17 45958075 45958386 -39480094 + AluSx SINE Alu 1 312 0 209 282 43 68 chr17 45958547 45958664 -39479816 - MIR SINE MIR -74 134 21 27 0 0 0 chr17 45958919 45958946 -39479534 + AT_rich Low_complexity Low_complexity 1 27 0 541 104 0 0 chr17 45958967 45959044 -39479436 - AluSg/x SINE Alu -18 294 218 764 138 0 32 chr17 45959357 45959480 -39479000 - FLAM_C SINE Alu -24 119 1 269 277 143 0 chr17 45959514 45959626 -39478854 - L1ME4a LINE L1 -4 6117 5990 468 323 31 0 chr17 45960128 45960354 -39478126 - L1ME4a LINE L1 -219 5902 5670 1797 101 101 0 chr17 45960355 45960622 -39477858 - AluSq SINE Alu -19 294 1 1275 144 31 0 chr17 45960831 45961026 -39477454 + L1MC1 LINE L1 6127 6327 -6 2055 128 0 0 chr17 45961071 45961367 -39477113 - AluSx SINE Alu -16 296 1 1945 149 0 3 chr17 45961397 45961705 -39476775 - AluJb SINE Alu 0 312 6 365 269 122 29 chr17 45961722 45961944 -39476536 - L1ME4a LINE L1 -816 5330 5089 22 0 0 0 chr17 45961975 45961997 -39476483 + AT_rich Low_complexity Low_complexity 1 22 0 292 307 55 28 chr17 45962219 45962437 -39476043 - L1ME4a LINE L1 -1444 4702 4479 6807 28 0 2 chr17 45962766 45963546 -39474934 + L1PA5 LINE L1 5371 6149 0 225 0 0 0 chr17 45963546 45963571 -39474909 + (TA)n Simple_repeat Simple_repeat 1 25 0 2183 119 3 0 chr17 45964084 45964394 -39474086 + AluSx SINE Alu 1 311 -1 2384 63 0 16 chr17 45965105 45965421 -39473059 - AluY SINE Alu 0 311 1 1785 139 0 24 chr17 45965461 45965755 -39472725 - AluJo SINE Alu 0 312 26 1416 196 100 6 chr17 45965759 45966070 -39472410 - MER58B DNA MER1_type 0 341 2 282 256 226 23 chr17 45967032 45967085 -39471395 - MIR SINE MIR -50 212 171 333 0 0 0 chr17 45967085 45967122 -39471358 + (CAT)n Simple_repeat Simple_repeat 3 39 0 282 256 226 23 chr17 45967122 45967201 -39471279 - MIR SINE MIR -91 171 53 1243 140 0 6 chr17 45967445 45967623 -39470857 - AluJo SINE Alu -135 177 1 310 0 0 0 chr17 45968076 45968111 -39470369 - U2 snRNA snRNA -153 35 1 258 156 0 0 chr17 45968191 45968236 -39470244 + CT-rich Low_complexity Low_complexity 1 45 0 1374 236 114 0 chr17 45968748 45969133 -39469347 - L1MB5 LINE L1 0 6174 5746 2044 119 25 0 chr17 45969163 45969468 -39469012 + AluSx SINE Alu 1 312 0 503 299 152 5 chr17 45970430 45970654 -39467826 - MIR SINE MIR -2 260 4 437 168 158 0 chr17 45971035 45971130 -39467350 + L1MB7 LINE L1 6075 6184 0 687 214 93 16 chr17 45971335 45971517 -39466963 - MIR SINE MIR -34 228 33 2206 127 7 0 chr17 45971821 45972129 -39466351 + AluSx SINE Alu 1 310 -2 2324 102 6 13 chr17 45972438 45972752 -39465728 + AluSx SINE Alu 1 312 0 2316 109 10 0 chr17 45973503 45973806 -39464674 - AluSx SINE Alu -6 306 1 2282 118 0 0 chr17 45974290 45974594 -39463886 - AluSx SINE Alu -8 304 1 267 118 167 108 chr17 45974808 45974910 -39463570 - MIR SINE MIR -26 236 129 246 287 96 9 chr17 45975087 45975202 -39463278 - MIR SINE MIR -117 145 21 421 268 42 14 chr17 45975833 45975975 -39462505 + MIR SINE MIR 35 180 -82 2016 163 0 3 chr17 45976771 45977065 -39461415 + AluSx SINE Alu 2 294 -18 509 244 228 6 chr17 45977163 45977343 -39461137 + MIR SINE MIR 8 227 -35 344 317 104 26 chr17 45977846 45978076 -39460404 + L1ME4a LINE L1 5872 6119 -2 1164 106 0 0 chr17 45978369 45978548 -39459932 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 357 127 25 13 chr17 45978844 45978923 -39459557 + L1MB7 LINE L1 6104 6183 -1 1034 275 73 3 chr17 45979265 45979581 -39458899 - L3 LINE CR1 -62 1515 1178 652 218 112 27 chr17 45979645 45979833 -39458647 - MIR SINE MIR -1 261 58 247 167 0 0 chr17 45979833 45979875 -39458605 - 5S rRNA rRNA -79 42 1 1850 148 3 45 chr17 45980899 45981043 -39457437 + AluJb SINE Alu 1 127 -185 2352 116 0 0 chr17 45981043 45981346 -39457134 + AluSx SINE Alu 1 303 -9 1850 148 3 45 chr17 45981346 45981511 -39456969 + AluJb SINE Alu 127 297 -15 1917 181 29 95 chr17 45981541 45982066 -39456414 + MLT1D LTR MaLR 16 505 0 241 294 22 11 chr17 45982269 45982361 -39456119 - MIR SINE MIR -150 112 20 200 125 50 0 chr17 45982490 45982530 -39455950 + T-rich Low_complexity Low_complexity 3 44 0 2069 140 0 13 chr17 45982542 45982842 -39455638 - AluJo SINE Alu -7 305 10 193 326 105 0 chr17 45984282 45984368 -39454112 - L2 LINE L2 -182 3090 2996 236 313 107 15 chr17 45985332 45985463 -39453017 - MIR3 SINE MIR -65 143 1 1422 193 89 4 chr17 45985797 45986077 -39452403 - AluJo SINE Alu -8 304 1 2914 193 48 77 chr17 45986543 45986618 -39451862 + MER97b DNA MER1_type? 15 91 -962 2026 119 20 14 chr17 45986618 45986912 -39451568 + AluSx SINE Alu 1 296 -16 2914 193 48 77 chr17 45986912 45987052 -39451428 + MER97b DNA MER1_type? 91 233 -820 2260 128 0 0 chr17 45987052 45987358 -39451122 - AluSq SINE Alu -7 306 1 2914 193 48 77 chr17 45987358 45987539 -39450941 + MER97b DNA MER1_type? 233 418 -635 2369 94 3 16 chr17 45987539 45987848 -39450632 - AluSx SINE Alu -6 306 2 2914 193 48 77 chr17 45987848 45988045 -39450435 + MER97b DNA MER1_type? 418 619 -434 1966 169 16 3 chr17 45988045 45988353 -39450127 - AluSx SINE Alu 0 312 1 2914 193 48 77 chr17 45988353 45988626 -39449854 + MER97b DNA MER1_type? 619 859 -194 507 272 13 47 chr17 45988727 45988959 -39449521 + MER97c DNA MER1_type? 867 1090 0 649 272 38 0 chr17 45989493 45989651 -39448829 + MIR SINE MIR 12 175 -87 2110 141 0 22 chr17 45989723 45990036 -39448444 - AluSx SINE Alu -2 310 5 462 272 112 44 chr17 45990538 45990788 -39447692 + MLT1K LTR MaLR 307 573 -15 200 226 94 0 chr17 45991097 45991150 -39447330 - MER5A DNA MER1_type 0 189 132 2295 83 0 14 chr17 45991159 45991470 -39447010 + AluY SINE Alu 1 307 0 551 224 35 0 chr17 45991494 45991610 -39446870 - MER5B DNA MER1_type -55 123 4 473 306 106 57 chr17 45991610 45991951 -39446529 - L2 LINE L2 -53 3219 2862 250 211 14 28 chr17 45991962 45992033 -39446447 + MLT1I LTR MaLR 340 409 0 2592 68 0 0 chr17 45992130 45992439 -39446041 - AluY SINE Alu -2 309 1 392 191 84 15 chr17 45992991 45993122 -39445358 - L1MC4 LINE L1 0 8042 7903 209 200 0 0 chr17 45993125 45993160 -39445320 + (TATG)n Simple_repeat Simple_repeat 1 35 0 237 211 22 44 chr17 45993160 45993250 -39445230 - L1MC4 LINE L1 -1340 6702 6615 197 316 79 0 chr17 45993330 45993406 -39445074 - L2 LINE L2 -219 3053 2972 1890 161 3 16 chr17 45993545 45993855 -39444625 + AluJb SINE Alu 1 306 -6 2215 132 0 0 chr17 45993926 45994229 -39444251 - AluSx SINE Alu -9 303 1 1018 244 121 13 chr17 45994265 45994767 -39443713 - L1ME4a LINE L1 -3 6118 5522 248 250 40 40 chr17 45994909 45994985 -39443495 + L2 LINE L2 3196 3271 -1 1104 270 0 0 chr17 45996145 45996393 -39442087 - MIR SINE MIR -10 252 5 184 343 104 0 chr17 45996876 45996943 -39441537 + L2 LINE L2 3200 3273 -40 443 304 40 66 chr17 45996964 45997191 -39441289 - MIR SINE MIR -21 241 21 297 0 0 0 chr17 45997638 45997671 -39440809 + (TG)n Simple_repeat Simple_repeat 2 34 0 279 116 0 0 chr17 45997911 45997954 -39440526 + Alu SINE Alu 1 43 -259 991 135 65 49 chr17 45997954 45998139 -39440341 + AluSg/x SINE Alu 110 297 -15 193 315 0 0 chr17 45998355 45998409 -39440071 - L3b LINE CR1 -197 1386 1333 425 250 26 9 chr17 45998439 45998555 -39439925 + Charlie8 DNA MER1_type 63 180 -2237 282 282 57 48 chr17 45999699 45999823 -39438657 + MIR SINE MIR 68 192 -70 1918 130 3 21 chr17 46000221 46000528 -39437952 - AluJo SINE Alu 0 306 5 233 237 51 0 chr17 46001008 46001067 -39437413 - MLT1A1 LTR MaLR -21 344 283 2362 108 0 13 chr17 46001067 46001382 -39437098 - AluSx SINE Alu -1 311 1 596 85 0 0 chr17 46001385 46001467 -39437013 + MSTA LTR MaLR 347 428 0 505 271 119 14 chr17 46001607 46001817 -39436663 - MIR SINE MIR -29 233 2 2325 99 10 3 chr17 46002084 46002387 -39436093 + AluSx SINE Alu 1 305 -7 404 212 40 10 chr17 46003277 46003376 -39435104 + MIR SINE MIR 42 143 -65 533 137 44 17 chr17 46004564 46004917 -39433563 + (CA)n Simple_repeat Simple_repeat 1 362 0 1872 163 23 7 chr17 46005142 46005442 -39433038 + AluJb SINE Alu 1 305 -7 304 333 172 48 chr17 46005604 46006145 -39432335 - L1MC4a LINE L1 -1877 5931 5324 2101 87 51 42 chr17 46006751 46007086 -39431394 + THE1B LTR MaLR 27 364 0 520 134 52 10 chr17 46007347 46007444 -39431036 + MER53 DNA DNA 17 117 -72 1844 219 74 19 chr17 46007445 46007919 -39430561 - MLT1D LTR MaLR 0 505 6 307 206 14 0 chr17 46007923 46007996 -39430484 - MER53 DNA DNA -115 74 1 2151 128 0 10 chr17 46008366 46008679 -39429801 - AluJo SINE Alu -2 310 1 723 155 9 0 chr17 46008682 46008798 -39429682 - FLAM_A SINE Alu -15 127 11 342 322 0 0 chr17 46008853 46008940 -39429540 - L2 LINE L2 0 3272 3186 180 0 0 0 chr17 46009471 46009491 -39428989 + (T)n Simple_repeat Simple_repeat 1 20 0 310 283 24 124 chr17 46009706 46009920 -39428560 + MIR SINE MIR 15 211 -51 1998 132 0 23 chr17 46010099 46010264 -39428216 - AluSx SINE Alu -16 296 140 2204 118 13 7 chr17 46010264 46010569 -39427911 - AluSx SINE Alu -5 307 1 1998 132 0 23 chr17 46010569 46010706 -39427774 - AluSx SINE Alu -172 140 1 311 182 143 0 chr17 46012272 46012349 -39426131 + MIR SINE MIR 110 197 -65 199 258 157 11 chr17 46012629 46012718 -39425762 - L2 LINE L2 -24 3289 3188 211 358 46 37 chr17 46014399 46014508 -39423972 - MIR SINE MIR -111 151 42 22 0 0 0 chr17 46014597 46014619 -39423861 + AT_rich Low_complexity Low_complexity 1 22 0 382 190 34 85 chr17 46015439 46015463 -39423017 + L1MC4 LINE L1 1907 1931 -6391 1738 159 47 14 chr17 46015463 46015740 -39422740 - AluJo SINE Alu -26 286 1 382 190 34 85 chr17 46015740 46015985 -39422495 + L1MC4 LINE L1 1931 6984 -1338 315 222 8 111 chr17 46015886 46016012 -39422468 - L1MCa LINE L1 -4334 2092 1980 * 320 128 13 128 chr17 46016029 46016107 -39422373 - L1MCa LINE L1 -4363 2063 1995 320 269 19 58 chr17 46016064 46016168 -39422312 + L1MC4 LINE L1 6604 6703 -1339 * 353 290 65 45 chr17 46016153 46016443 -39422037 + L1MC5 LINE L1 7459 7754 -207 2497 55 14 0 chr17 46016458 46016750 -39421730 - AluY SINE Alu -13 298 3 2042 128 17 0 chr17 46017820 46018117 -39420363 + AluSx SINE Alu 1 302 -10 563 328 96 9 chr17 46019261 46019490 -39418990 - MIR SINE MIR -12 250 2 811 226 49 18 chr17 46020582 46020823 -39417657 + MIR SINE MIR 5 251 -11 739 167 25 31 chr17 46020845 46021007 -39417473 - MER20 DNA MER1_type -9 210 50 21 36 0 0 chr17 46023413 46023441 -39415039 + AT_rich Low_complexity Low_complexity 1 28 0 405 0 0 0 chr17 46025098 46025143 -39413337 + (CA)n Simple_repeat Simple_repeat 1 45 0 253 325 7 20 chr17 46025513 46025664 -39412816 + (CGG)n Simple_repeat Simple_repeat 1 149 0 1417 156 100 22 chr17 46026994 46027263 -39411217 - AluJo SINE Alu -22 290 1 319 326 35 96 chr17 46027293 46027450 -39411030 + L2 LINE L2 2568 2694 -620 2122 108 13 0 chr17 46027450 46027757 -39410723 - AluSx SINE Alu -1 311 1 319 326 35 96 chr17 46027757 46027943 -39410537 + L2 LINE L2 2694 2890 -424 351 131 81 81 chr17 46028408 46028440 -39410040 + MLT1I LTR MaLR 308 339 -70 2104 127 7 0 chr17 46028440 46028739 -39409741 + AluSx SINE Alu 1 301 -11 351 131 81 81 chr17 46028739 46028805 -39409675 + MLT1I LTR MaLR 338 406 -3 2161 109 7 0 chr17 46029178 46029480 -39409000 + AluSx SINE Alu 1 304 -8 2246 94 7 3 chr17 46030495 46030821 -39407659 - AluSx SINE Alu 0 312 1 384 152 0 0 chr17 46030889 46030955 -39407525 + (TG)n Simple_repeat Simple_repeat 2 67 0 180 333 11 32 chr17 46031178 46031271 -39407209 + MIR SINE MIR 108 198 -64 2141 92 32 0 chr17 46031964 46032248 -39406232 - AluSg SINE Alu -17 293 1 733 163 25 64 chr17 46032271 46032473 -39406007 + MER96B DNA MER1_type? 183 376 -41 200 345 0 61 chr17 46033005 46033153 -39405327 - L2 LINE L2 -6 3307 3169 * 365 244 116 13 chr17 46033120 46033299 -39405181 - MIR SINE MIR -37 225 28 235 81 0 0 chr17 46033495 46033532 -39404948 + MIR SINE MIR 103 139 -123 387 284 63 0 chr17 46034397 46034524 -39403956 + MER117 DNA MER1_type 63 197 0 547 258 201 0 chr17 46034653 46034847 -39403633 - MIR SINE MIR -22 240 8 404 283 117 39 chr17 46034920 46035100 -39403380 - MIR SINE MIR -51 211 18 188 308 31 15 chr17 46035215 46035280 -39403200 - L2 LINE L2 -1 3312 3247 184 277 53 53 chr17 46035621 46035715 -39402765 + MIR SINE MIR 103 196 -66 360 0 0 0 chr17 46035769 46035809 -39402671 + (GTTTG)n Simple_repeat Simple_repeat 2 41 0 1020 185 31 15 chr17 46035811 46036006 -39402474 - AluJo SINE Alu -30 282 85 489 114 43 0 chr17 46036006 46036076 -39402404 - FRAM SINE Alu -62 114 42 613 306 63 36 chr17 46037131 46037142 -39401338 - MIR SINE MIR 0 262 253 2137 80 0 17 chr17 46037142 46037452 -39401028 + AluSx SINE Alu 1 305 0 613 306 63 36 chr17 46037452 46037691 -39400789 - MIR SINE MIR -9 253 4 223 258 0 32 chr17 46037811 46037873 -39400607 - L2 LINE L2 -30 3283 3224 932 271 168 3 chr17 46038783 46039123 -39399357 + L2 LINE L2 2900 3295 -18 1520 116 4 23 chr17 46039124 46039382 -39399098 + MER2 DNA MER2_type 1 253 -92 236 362 0 21 chr17 46039829 46039970 -39398510 + CT-rich Low_complexity Low_complexity 4 141 0 226 254 0 60 chr17 46040013 46040080 -39398400 + MIR SINE MIR 188 250 -12 258 281 85 12 chr17 46040865 46040947 -39397533 + MIR SINE MIR 74 161 -101 228 246 164 0 chr17 46041409 46041470 -39397010 + MIR SINE MIR 183 253 -9 599 301 84 5 chr17 46041520 46041723 -39396757 + MIR SINE MIR 1 219 -43 513 242 6 68 chr17 46042794 46042955 -39395525 - MIR3 SINE MIR -48 160 10 400 345 88 6 chr17 46043872 46044043 -39394437 - MIR SINE MIR -40 222 38 203 376 35 56 chr17 46044035 46044232 -39394248 - MIR SINE MIR -34 228 36 * 347 314 16 16 chr17 46044605 46044729 -39393751 + MIR3 SINE MIR 77 200 -8 320 255 50 10 chr17 46045044 46045152 -39393328 - MIR SINE MIR -63 145 51 406 320 57 29 chr17 46045562 46045737 -39392743 + MIR3 SINE MIR 26 205 -3 673 286 82 16 chr17 46046319 46046564 -39391916 - MIR SINE MIR 0 262 2 315 310 155 0 chr17 46047085 46047214 -39391266 - MIR3 SINE MIR -26 182 34 687 284 113 6 chr17 46049149 46049494 -39388986 - L1MC4a LINE L1 -1777 6031 5650 1683 72 25 17 chr17 46049768 46050005 -39388475 + AluSq SINE Alu 55 293 -20 2307 81 0 0 chr17 46050009 46050305 -39388175 + AluSc SINE Alu 1 296 -13 320 315 34 27 chr17 46050305 46050454 -39388026 + MER5B DNA MER1_type 28 177 -1 365 275 0 0 chr17 46050455 46050535 -39387945 - MIR3 SINE MIR -48 160 81 1323 111 0 0 chr17 46050549 46050738 -39387742 - AluSc SINE Alu -7 302 114 237 267 29 67 chr17 46052801 46052906 -39385574 - MER5A DNA MER1_type -84 105 5 1982 104 0 49 chr17 46053839 46054147 -39384333 + AluSx SINE Alu 1 293 -19 290 383 23 8 chr17 46054232 46054360 -39384120 + MIR SINE MIR 120 249 -13 247 194 222 37 chr17 46057046 46057154 -39381326 + MIR3 SINE MIR 11 138 -70 217 363 20 48 chr17 46058117 46058263 -39380217 + MIR3 SINE MIR 45 186 -22 773 197 162 10 chr17 46058330 46058528 -39379952 + MIR SINE MIR 33 260 -2 274 256 39 13 chr17 46058545 46058623 -39379857 + L3 LINE CR1 1494 1573 -4 975 203 11 6 chr17 46058678 46058855 -39379625 - MER5B DNA MER1_type 0 178 1 1826 88 3 57 chr17 46059120 46059403 -39379077 + AluSx SINE Alu 37 304 -8 430 273 22 7 chr17 46059514 46059653 -39378827 + Charlie8 DNA MER1_type 7 147 -2270 213 287 82 46 chr17 46060092 46060221 -39378259 - MIR SINE MIR -65 143 3 187 234 104 39 chr17 46060281 46060358 -39378122 - MER5A DNA MER1_type -80 109 28 427 231 71 132 chr17 46061526 46061708 -39376772 - MER91B DNA MER1_type -17 173 3 506 236 236 8 chr17 46063702 46063948 -39374532 - LTR16C LTR ERVL -158 333 32 228 289 0 0 chr17 46064670 46064722 -39373758 - L2 LINE L2 -14 3258 3207 207 0 0 0 chr17 46065634 46065657 -39372823 + (T)n Simple_repeat Simple_repeat 1 23 0 627 69 0 20 chr17 46065659 46065760 -39372720 + MER9 LTR ERVK 364 462 -49 594 281 111 9 chr17 46066358 46066575 -39371905 - MIR SINE MIR -15 247 9 2197 99 0 10 chr17 46068012 46068304 -39370176 + AluSq SINE Alu 3 291 -22 2771 171 36 74 chr17 46068312 46069027 -39369453 - L1MB5 LINE L1 -36 6138 5451 2232 112 0 14 chr17 46069707 46070003 -39368477 + AluSx SINE Alu 4 295 -17 2043 145 3 7 chr17 46070031 46070335 -39368145 + AluSx SINE Alu 1 303 -9 986 171 78 5 chr17 46070391 46070608 -39367872 + MLT1C LTR MaLR 13 245 -222 229 274 172 43 chr17 46071078 46071264 -39367216 - MLT1J2 LTR MaLR 0 450 241 394 249 60 33 chr17 46071603 46071762 -39366718 - MIR3 SINE MIR -21 187 22 270 299 122 7 chr17 46074254 46074401 -39364079 - MIR3 SINE MIR -1 207 44 187 200 0 60 chr17 46074575 46074625 -39363855 + L2 LINE L2 2935 2981 -332 195 309 29 15 chr17 46074969 46075037 -39363443 + MIR SINE MIR 86 154 -108 605 303 67 0 chr17 46075209 46075417 -39363063 + MIR SINE MIR 2 223 -39 319 347 25 8 chr17 46075736 46075857 -39362623 + L2 LINE L2 3182 3304 -9 279 79 0 0 chr17 46075858 46075896 -39362584 + (TGAA)n Simple_repeat Simple_repeat 2 39 0 323 311 61 0 chr17 46077286 46077418 -39361062 - MER5B DNA MER1_type -1 177 38 336 134 247 21 chr17 46077744 46077841 -39360639 + L2 LINE L2 3191 3309 -4 345 271 179 0 chr17 46077861 46078001 -39360479 + MIR SINE MIR 70 234 -28 443 283 7 14 chr17 46078216 46078354 -39360126 + (CA)n Simple_repeat Simple_repeat 1 137 0 355 259 122 0 chr17 46079151 46079282 -39359198 - MIR3 SINE MIR -32 176 30 442 304 103 10 chr17 46079494 46079698 -39358782 + MIR SINE MIR 21 243 -19 210 91 0 0 chr17 46080533 46080566 -39357914 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1946 142 21 7 chr17 46080566 46080846 -39357634 - AluJb SINE Alu -25 287 1 204 154 21 4 chr17 46080988 46081046 -39357434 - MIR SINE MIR -82 126 69 596 188 83 92 chr17 46081438 46081656 -39356824 + MLT1D LTR MaLR 1 216 -289 2054 135 3 3 chr17 46081656 46081953 -39356527 + AluSx SINE Alu 1 297 -15 2452 101 3 0 chr17 46081964 46082271 -39356209 + AluSq SINE Alu 1 308 -5 910 229 64 87 chr17 46082306 46082572 -39355908 + MLT1D LTR MaLR 196 493 -12 2298 134 96 112 chr17 46082983 46083438 -39355042 - L1MB3 LINE L1 0 6183 5681 236 111 22 0 chr17 46083438 46083483 -39354997 + MADE1 DNA Mariner 1 46 -34 2298 134 96 112 chr17 46083483 46083565 -39354915 - L1MB3 LINE L1 -502 5681 5599 396 55 0 0 chr17 46083574 46083629 -39354851 + (TATG)n Simple_repeat Simple_repeat 2 56 0 610 170 27 9 chr17 46083629 46083731 -39354749 - FLAM_A SINE Alu -192 119 13 1809 163 0 28 chr17 46083744 46084055 -39354425 - AluJo SINE Alu 0 303 1 1346 187 32 61 chr17 46084059 46084169 -39354311 - L1MB3 LINE L1 -580 5603 5491 2077 138 3 16 chr17 46084169 46084501 -39353979 - AluSq SINE Alu 0 313 1 1346 187 32 61 chr17 46084501 46085011 -39353469 - L1MB3 LINE L1 -692 5491 5005 2144 128 23 0 chr17 46086036 46086341 -39352139 + AluSx SINE Alu 1 312 0 866 168 15 61 chr17 46086373 46086447 -39352033 + MER5A DNA MER1_type 3 79 -110 2306 112 0 3 chr17 46086447 46086760 -39351720 + AluSx SINE Alu 1 312 0 866 168 15 61 chr17 46086760 46086881 -39351599 + MER5A DNA MER1_type 79 189 0 464 186 203 17 chr17 46086889 46087007 -39351473 - MER58B DNA MER1_type 0 341 202 1154 167 32 0 chr17 46087257 46087473 -39351007 - LTR26 LTR ERV1 0 603 381 918 235 81 73 chr17 46087535 46087968 -39350512 - MLT1C LTR MaLR -16 488 12 268 246 0 0 chr17 46088740 46088797 -39349683 + MIR SINE MIR 45 101 -107 432 211 56 37 chr17 46088801 46088962 -39349518 + L1MC4a LINE L1 5272 5435 -735 478 189 0 0 chr17 46088963 46089058 -39349422 + L1MD3 LINE L1 7774 7868 -127 1981 108 15 234 chr17 46089058 46089672 -39348808 - LTR12 LTR ERV1 -234 480 2 472 226 52 0 chr17 46089672 46089787 -39348693 + L1MD3 LINE L1 7863 7983 -12 709 192 0 27 chr17 46089791 46089937 -39348543 + FLAM_C SINE Alu 2 143 0 551 302 130 11 chr17 46089972 46090333 -39348147 + L1MC4a LINE L1 5552 5955 -1853 1418 120 53 14 chr17 46090540 46090772 -39347708 - AluJb SINE Alu 0 312 86 878 138 0 0 chr17 46090774 46090890 -39347590 - AluJo/FLAM SINE Alu -186 126 11 192 325 36 12 chr17 46090903 46090986 -39347494 + MIR3 SINE MIR 109 193 -15 456 261 42 47 chr17 46091022 46091237 -39347243 + L2 LINE L2 2842 3055 -258 302 283 152 35 chr17 46092188 46092386 -39346094 - MLT1K LTR MaLR -185 403 183 4036 85 21 85 chr17 46092522 46093231 -39345249 - MER4A LTR ERV1 0 664 1 378 279 46 31 chr17 46093560 46093744 -39344736 - MIR3 SINE MIR -7 201 12 915 128 0 0 chr17 46093879 46094012 -39344468 - FLAM_C SINE Alu 0 133 1 472 301 224 13 chr17 46094805 46095104 -39343376 - MLT1I LTR MaLR -7 402 41 4662 97 22 12 chr17 46095113 46095797 -39342683 + LTR8 LTR ERV1 1 691 0 475 129 47 0 chr17 46095992 46096077 -39342403 + MER20 DNA MER1_type 89 177 -42 1734 169 3 24 chr17 46096082 46096220 -39342260 + AluJo SINE Alu 1 140 -172 1947 149 7 3 chr17 46096220 46096521 -39341959 + AluJb SINE Alu 5 306 -6 1734 169 3 24 chr17 46096521 46096677 -39341803 + AluJo SINE Alu 140 289 -23 542 182 64 0 chr17 46096967 46097077 -39341403 - MER20 DNA MER1_type -97 122 6 355 296 130 0 chr17 46097143 46097258 -39341222 + MIR3 SINE MIR 49 178 -30 375 41 0 0 chr17 46097654 46097703 -39340777 + (TG)n Simple_repeat Simple_repeat 1 49 0 405 350 123 28 chr17 46098267 46098318 -39340162 - L2 LINE L2 -2 3270 3225 1740 126 52 68 chr17 46098318 46098500 -39339980 + THE1C LTR MaLR 1 184 -191 2347 112 0 0 chr17 46098500 46098795 -39339685 + AluSx SINE Alu 1 295 -17 1740 126 52 68 chr17 46098795 46098993 -39339487 + THE1C LTR MaLR 184 375 0 405 350 123 28 chr17 46098993 46099341 -39339139 - L2 LINE L2 -47 3225 2833 2851 199 18 50 chr17 46099430 46099714 -39338766 + MER82 DNA MER2_type 16 308 -345 1797 183 13 22 chr17 46099714 46100026 -39338454 - AluJo SINE Alu -3 309 1 2851 199 18 50 chr17 46100026 46100106 -39338374 + MER82 DNA MER2_type 308 389 -264 2048 118 9 40 chr17 46100106 46100428 -39338052 + AluSx SINE Alu 1 312 0 2851 199 18 50 chr17 46100428 46100715 -39337765 + MER82 DNA MER2_type 389 647 -6 1965 144 23 3 chr17 46101621 46101920 -39336560 - AluJb SINE Alu -2 310 6 2665 127 23 7 chr17 46101941 46102382 -39336098 - L1MC1 LINE L1 -2 6331 5884 2205 107 17 0 chr17 46102412 46102711 -39335769 - AluSx SINE Alu -8 304 1 2389 66 3 3 chr17 46102730 46103017 -39335463 + AluY SINE Alu 1 287 -24 180 0 0 0 chr17 46103030 46103050 -39335430 + (TA)n Simple_repeat Simple_repeat 1 20 0 1691 194 3 0 chr17 46103298 46103591 -39334889 + AluJo SINE Alu 1 294 -18 1387 251 70 5 chr17 46104601 46104975 -39333505 + MLT1J LTR MaLR 39 436 -75 531 349 25 13 chr17 46105038 46105273 -39333207 - ERVL LTR ERVL -651 5113 4876 6829 120 22 35 chr17 46105383 46105653 -39332827 - Tigger3b DNA MER2_type -1811 1217 945 1997 138 4 0 chr17 46105653 46105958 -39332522 + AluJo SINE Alu 8 313 0 6829 120 22 35 chr17 46105958 46106095 -39332385 - Tigger3b DNA MER2_type -2083 945 808 2312 103 0 3 chr17 46106095 46106395 -39332085 - AluSp SINE Alu -14 299 1 6829 120 22 35 chr17 46106395 46106972 -39331508 - Tigger3b DNA MER2_type -2220 808 246 2273 113 0 0 chr17 46106972 46107264 -39331216 - AluSx SINE Alu -20 292 1 6829 120 22 35 chr17 46107264 46107476 -39331004 - Tigger3b DNA MER2_type -2782 246 33 920 221 54 133 chr17 46107496 46107869 -39330611 - MLT1D LTR MaLR -32 594 193 2300 101 0 44 chr17 46107869 46108187 -39330293 + AluSx SINE Alu 1 304 -8 920 221 54 133 chr17 46108187 46108395 -39330085 - MLT1D LTR MaLR -433 193 67 1466 116 0 0 chr17 46108395 46108626 -39329854 + AluSg/x SINE Alu 92 322 0 920 221 54 133 chr17 46108626 46108689 -39329791 - MLT1D LTR MaLR -559 67 1 3556 368 29 10 chr17 46108793 46109386 -39329094 - ERVL LTR ERVL -1073 4581 4001 2320 102 7 0 chr17 46109386 46109689 -39328791 - AluSx SINE Alu -7 305 1 3556 368 29 10 chr17 46109689 46110943 -39327537 - ERVL LTR ERVL -1653 4001 2698 310 170 54 25 chr17 46110966 46111072 -39327408 - LTR41 LTR ERVL 0 795 672 2477 109 0 0 chr17 46111489 46111800 -39326680 - AluSx SINE Alu -1 311 1 643 217 24 12 chr17 46111800 46111966 -39326514 - LTR41 LTR ERVL -605 168 1 1054 295 108 22 chr17 46111966 46112427 -39326053 - ERVL LTR ERVL -2323 2673 2173 929 281 33 14 chr17 46112629 46113072 -39325408 - ERVL LTR ERVL -2854 2142 1567 2294 117 0 0 chr17 46113072 46113380 -39325100 - AluSg SINE Alu -2 308 1 929 281 33 14 chr17 46113380 46113518 -39324962 - ERVL LTR ERVL -3429 1567 1433 1908 276 50 32 chr17 46114081 46114186 -39324294 - ERVL LTR ERVL -3582 1414 1312 1640 158 44 7 chr17 46114186 46114507 -39323973 - AluJb SINE Alu 0 331 1 1908 276 50 32 chr17 46114507 46114727 -39323753 - ERVL LTR ERVL -3684 1312 1098 2016 124 3 28 chr17 46114727 46115054 -39323426 - AluSx SINE Alu 0 321 2 1908 276 50 32 chr17 46115054 46115381 -39323099 - ERVL LTR ERVL -3898 1098 747 918 201 0 34 chr17 46115435 46115591 -39322889 - ERVL LTR ERVL -4354 642 491 2445 98 45 0 chr17 46115591 46115950 -39322530 - THE1C LTR MaLR 0 375 1 918 201 0 34 chr17 46115950 46115972 -39322508 - ERVL LTR ERVL -4505 491 470 958 241 65 13 chr17 46116034 46116266 -39322214 - ERVL LTR ERVL -4752 244 1 1050 250 105 50 chr17 46116273 46116313 -39322167 - LTR16A LTR ERVL -7 443 407 230 56 28 0 chr17 46116313 46116349 -39322131 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1050 250 105 50 chr17 46116349 46116366 -39322114 - LTR16A LTR ERVL -43 407 392 2120 139 0 0 chr17 46116366 46116654 -39321826 - AluSx SINE Alu -24 288 1 1050 250 105 50 chr17 46116654 46117015 -39321465 - LTR16A LTR ERVL -58 392 1 553 215 120 0 chr17 46117015 46117173 -39321307 + Charlie4 DNA MER1_type 1782 1958 -3 557 257 79 54 chr17 46117392 46117672 -39320808 + MLT1J2 LTR MaLR 16 302 -148 264 279 207 9 chr17 46117868 46117979 -39320501 - MIR3 SINE MIR -73 135 3 2376 97 0 3 chr17 46118662 46118961 -39319519 - AluSx SINE Alu -14 298 1 325 226 70 26 chr17 46119038 46119073 -39319407 - MIR3 SINE MIR -1 207 175 892 189 82 5 chr17 46119073 46119279 -39319201 + MER58A DNA MER1_type 3 224 0 325 226 70 26 chr17 46119279 46119358 -39319122 - MIR3 SINE MIR -33 175 88 2133 112 3 7 chr17 46119614 46119900 -39318580 + AluSx SINE Alu 1 285 -27 354 22 22 0 chr17 46119900 46119946 -39318534 + (CAAA)n Simple_repeat Simple_repeat 2 180 0 237 219 57 65 chr17 46120022 46120145 -39318335 + L1MC/D LINE L1 5604 5725 -2083 572 207 36 0 chr17 46120614 46120754 -39317726 - L1M4 LINE L1 -3558 2588 2444 696 168 67 96 chr17 46121663 46121806 -39316674 + MER3 DNA MER1_type 8 145 -64 1331 191 24 40 chr17 46121806 46122104 -39316376 - AluJo SINE Alu -19 293 1 696 168 67 96 chr17 46122104 46122168 -39316312 + MER3 DNA MER1_type 145 209 0 1369 236 60 27 chr17 46122364 46122849 -39315631 + L1M4 LINE L1 2399 2875 -3271 4797 53 12 0 chr17 46123063 46123647 -39314833 + LTR10C LTR ERV1 1 591 0 734 95 0 0 chr17 46123756 46123851 -39314629 + AluS SINE Alu 2 96 -216 690 122 28 0 chr17 46123852 46123959 -39314521 + AluSg/x SINE Alu 198 307 -3 2397 173 61 38 chr17 46123959 46124142 -39314338 + L1MB7 LINE L1 5599 5776 -408 612 164 8 67 chr17 46124142 46124276 -39314204 + FLAM_A SINE Alu 2 127 -6 2397 173 61 38 chr17 46124276 46124665 -39313815 + L1MB7 LINE L1 5776 6184 0 2060 108 3 10 chr17 46124990 46125278 -39313202 + AluSg SINE Alu 1 286 -24 1231 121 12 0 chr17 46125378 46125551 -39312929 - AluSq SINE Alu -110 203 29 26 0 0 0 chr17 46125573 46125599 -39312881 + AT_rich Low_complexity Low_complexity 1 26 0 241 140 20 20 chr17 46125653 46125703 -39312777 - Charlie8 DNA MER1_type 0 2417 2368 1019 228 49 42 chr17 46125722 46125852 -39312628 - MLT1A2 LTR MaLR 0 374 246 2771 159 2 56 chr17 46125852 46125956 -39312524 - MER66B LTR ERV1 0 486 378 1900 140 39 7 chr17 46125956 46126242 -39312238 - AluSx SINE Alu -17 295 1 2771 159 2 56 chr17 46126242 46126478 -39312002 - MER66B LTR ERV1 -108 378 181 2226 111 0 0 chr17 46126478 46126766 -39311714 + AluSg SINE Alu 1 288 -22 2771 159 2 56 chr17 46126766 46126938 -39311542 - MER66B LTR ERV1 -305 181 1 1019 228 49 42 chr17 46126938 46127092 -39311388 - MLT1A2 LTR MaLR -128 246 88 2008 117 0 77 chr17 46127099 46127271 -39311209 - AluSx SINE Alu -13 299 162 2126 97 3 42 chr17 46127271 46127579 -39310901 - AluY SINE Alu -15 296 1 2008 117 0 77 chr17 46127579 46127730 -39310750 - AluSx SINE Alu -150 162 1 1698 204 36 13 chr17 46127739 46128024 -39310456 + L1M4 LINE L1 4033 4331 -1815 2168 128 7 0 chr17 46128024 46128329 -39310151 + AluSg SINE Alu 1 307 -3 1698 204 36 13 chr17 46128329 46128436 -39310044 + L1M4 LINE L1 4331 4434 -1712 2576 59 0 0 chr17 46128512 46128815 -39309665 - AluY SINE Alu -8 303 1 2902 198 41 48 chr17 46128830 46128891 -39309589 + L1M4 LINE L1 4271 4331 -1815 853 233 12 6 chr17 46128891 46129063 -39309417 - FAM SINE Alu -2 173 1 2902 198 41 48 chr17 46129063 46129568 -39308912 + L1M4 LINE L1 4331 4833 -1313 1522 157 50 60 chr17 46129568 46129719 -39308761 - AluJb SINE Alu -15 297 149 2299 106 3 0 chr17 46129719 46130012 -39308468 - AluSp SINE Alu -19 294 1 1522 157 50 60 chr17 46130012 46130160 -39308320 - AluJb SINE Alu -163 149 1 2902 198 41 48 chr17 46130160 46130323 -39308157 + L1M4 LINE L1 4833 4996 -1150 1421 102 0 56 chr17 46130376 46130545 -39307935 - AluSc SINE Alu -17 292 136 2409 79 3 7 chr17 46130545 46130849 -39307631 - AluSp SINE Alu -10 303 1 1421 102 0 56 chr17 46130849 46130894 -39307586 - AluSc SINE Alu -173 136 90 321 162 29 15 chr17 46130894 46130962 -39307518 + L1M4 LINE L1 5038 5106 -1040 459 113 0 14 chr17 46130964 46131035 -39307445 + L1M4 LINE L1 5598 5667 -511 1234 137 0 97 chr17 46131057 46131101 -39307379 + AluSg/x SINE Alu 95 142 -168 2236 116 13 0 chr17 46131101 46131402 -39307078 + AluSx SINE Alu 6 310 -2 1234 137 0 97 chr17 46131402 46131583 -39306897 + AluSg/x SINE Alu 142 298 -12 372 184 53 26 chr17 46131614 46131728 -39306752 + HAL1 LINE L1 971 1087 -1420 1620 128 0 0 chr17 46131731 46131950 -39306530 + AluSx SINE Alu 1 219 -93 780 134 0 0 chr17 46131950 46132069 -39306411 + AluSg/x SINE Alu 188 306 -6 725 236 6 6 chr17 46132135 46132296 -39306184 - FRAM SINE Alu -17 159 1 414 200 22 0 chr17 46132362 46132452 -39306028 + AluJo/FLAM SINE Alu 42 133 -169 1524 114 0 0 chr17 46132452 46132653 -39305827 - AluSx SINE Alu -5 307 107 724 123 28 0 chr17 46132697 46132803 -39305677 - AluSx SINE Alu -202 110 2 2006 133 17 0 chr17 46132804 46133097 -39305383 - AluSx SINE Alu -14 298 1 2332 88 7 0 chr17 46133195 46133490 -39304990 - AluSq SINE Alu -16 297 1 641 325 77 43 chr17 46133518 46133958 -39304522 + L2 LINE L2 2315 2769 -545 186 216 0 0 chr17 46134015 46134052 -39304428 + MER5A DNA MER1_type 1 37 -152 1287 161 5 0 chr17 46134115 46134320 -39304160 - AluSg/x SINE Alu -4 306 101 2234 93 6 22 chr17 46134320 46134633 -39303847 + AluSx SINE Alu 1 308 -4 2069 109 3 13 chr17 46134635 46134937 -39303543 + AluSq SINE Alu 1 299 -14 194 177 0 65 chr17 46135417 46135479 -39303001 + A-rich Low_complexity Low_complexity 1 58 0 190 226 48 48 chr17 46136364 46136426 -39302054 - MIR3 SINE MIR -19 189 128 183 129 0 0 chr17 46136575 46136606 -39301874 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 21 36 0 0 chr17 46137160 46137188 -39301292 + AT_rich Low_complexity Low_complexity 1 28 0 994 104 0 28 chr17 46137736 46137880 -39300600 + L1PA8A LINE L1 5992 6131 0 1903 115 4 18 chr17 46138036 46138314 -39300166 + AluSx SINE Alu 1 274 -38 213 307 139 0 chr17 46138483 46138584 -39299896 - L2 LINE L2 -4 3268 3154 2188 102 3 23 chr17 46138652 46138955 -39299525 + AluSp SINE Alu 1 297 -16 2201 112 7 0 chr17 46139249 46139544 -39298936 + AluSg SINE Alu 1 297 -13 189 0 0 0 chr17 46140063 46140084 -39298396 + (CGGGG)n Simple_repeat Simple_repeat 3 23 0 22 88 0 0 chr17 46141259 46141316 -39297164 + GC_rich Low_complexity Low_complexity 1 57 0 1220 149 15 0 chr17 46142225 46142420 -39296060 + AluSq SINE Alu 115 312 -1 1926 125 7 7 chr17 46142478 46142758 -39295722 + AluSx SINE Alu 12 291 -21 1529 127 9 5 chr17 46142798 46143018 -39295462 - AluSx SINE Alu -91 221 1 1144 225 141 7 chr17 46143022 46143298 -39295182 - MER21B LTR ERV1 -550 313 1 339 209 40 115 chr17 46143390 46143538 -39294942 - MER20B DNA MER1_type -646 137 1 222 222 0 19 chr17 46143699 46143753 -39294727 - L2 LINE L2 0 3313 3261 1942 115 65 0 chr17 46144004 46144282 -39294198 + AluSg SINE Alu 1 296 -14 377 167 0 0 chr17 46144312 46144372 -39294108 + AluSp SINE Alu 75 134 -169 2005 124 7 0 chr17 46144498 46144788 -39293692 - AluSx SINE Alu -20 292 1 1187 173 6 130 chr17 46144853 46145200 -39293280 - AluSp SINE Alu 0 313 10 2019 117 43 0 chr17 46146102 46146383 -39292097 + AluSx SINE Alu 1 293 -19 1578 174 22 7 chr17 46146433 46146709 -39291771 + AluJb SINE Alu 12 291 -21 1650 183 4 0 chr17 46146709 46147004 -39291476 - AluJb SINE Alu 0 302 7 934 110 0 0 chr17 46147208 46147326 -39291154 + AluSq/x SINE Alu 1 118 -195 21 0 0 0 chr17 46147330 46147351 -39291129 + AT_rich Low_complexity Low_complexity 1 21 0 1247 222 42 10 chr17 46147376 46147664 -39290816 + AluJb SINE Alu 1 297 -15 1987 149 13 3 chr17 46147847 46148149 -39290331 + AluSx SINE Alu 1 305 -7 527 43 143 0 chr17 46148151 46148221 -39290259 + MER41B LTR ERV1 171 250 -385 934 183 44 0 chr17 46148225 46148248 -39290232 + AluJb SINE Alu 113 134 -178 1967 132 45 0 chr17 46148248 46148537 -39289943 + AluSx SINE Alu 1 302 -10 934 183 44 0 chr17 46148537 46148693 -39289787 + AluJb SINE Alu 134 300 -12 359 228 82 25 chr17 46151106 46151264 -39287216 + MER113 DNA MER1_type? 11 177 -344 2162 122 0 6 chr17 46151308 46151620 -39286860 + AluSg SINE Alu 1 310 0 1798 141 25 18 chr17 46151680 46151964 -39286516 + AluJo SINE Alu 1 286 -26 399 264 72 30 chr17 46151980 46152147 -39286333 + MER113 DNA MER1_type? 338 511 -10 7956 72 2 1 chr17 46152267 46153235 -39285245 + LTR5 LTR ERVK 1 969 0 305 203 63 51 chr17 46153630 46153709 -39284771 + L1ME LINE L1 5537 5616 -554 2255 111 3 0 chr17 46153714 46154012 -39284468 - AluSx SINE Alu -13 299 1 1848 160 0 22 chr17 46154127 46154439 -39284041 + AluJo SINE Alu 1 305 -7 2456 68 3 3 chr17 46154443 46154753 -39283727 + AluY SINE Alu 1 310 -1 21 36 0 0 chr17 46154802 46154830 -39283650 + AT_rich Low_complexity Low_complexity 1 28 0 2207 112 14 0 chr17 46154901 46155196 -39283284 + AluSx SINE Alu 1 299 -13 958 187 0 0 chr17 46155199 46155354 -39283126 + AluJo SINE Alu 85 239 -73 669 170 0 0 chr17 46155354 46155466 -39283014 + AluJo/FRAM SINE Alu 200 311 -1 291 225 180 0 chr17 46155514 46155603 -39282877 - L2 LINE L2 0 3313 3209 756 276 102 0 chr17 46155660 46155925 -39282555 + HAL1 LINE L1 1367 1658 -849 1923 162 3 7 chr17 46155969 46156278 -39282202 + AluSx SINE Alu 1 308 -4 719 138 21 76 chr17 46156305 46156450 -39282030 - FLAM_C SINE Alu 0 143 7 2020 135 30 0 chr17 46156461 46156757 -39281723 - AluSx SINE Alu -7 305 1 312 284 147 65 chr17 46156822 46157052 -39281428 + HAL1 LINE L1 1824 2034 -473 1817 171 23 0 chr17 46157052 46157357 -39281123 + AluJb SINE Alu 1 312 0 2226 139 0 0 chr17 46157361 46157670 -39280810 + AluSx SINE Alu 1 309 -3 312 284 147 65 chr17 46157670 46157740 -39280740 + HAL1 LINE L1 2036 2154 -353 2197 129 0 0 chr17 46157745 46158048 -39280432 + AluSq SINE Alu 1 303 -10 2199 104 0 0 chr17 46158141 46158469 -39280011 + AluSg1 SINE Alu 1 328 0 2154 102 7 7 chr17 46158590 46158884 -39279596 + AluSx SINE Alu 1 294 -18 2004 117 37 7 chr17 46158896 46159220 -39279260 + AluSq SINE Alu 5 337 0 2247 118 0 9 chr17 46159737 46160052 -39278428 + AluJb SINE Alu 1 312 0 2334 88 3 0 chr17 46160652 46160949 -39277531 + AluSq SINE Alu 1 298 -15 192 77 0 0 chr17 46161077 46161103 -39277377 + (CA)n Simple_repeat Simple_repeat 2 27 0 2288 110 7 0 chr17 46161652 46161960 -39276520 + AluSp SINE Alu 2 311 -2 185 65 32 0 chr17 46163012 46163043 -39275437 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2210 97 3 3 chr17 46164124 46164414 -39274066 + AluSq SINE Alu 1 290 -23 2003 138 3 3 chr17 46164778 46165067 -39273413 + AluSg SINE Alu 1 289 -21 2211 114 0 43 chr17 46165362 46165687 -39272793 + AluSp SINE Alu 1 311 -2 2141 111 24 0 chr17 46165937 46166225 -39272255 - AluSg SINE Alu -15 295 1 24 0 0 0 chr17 46167249 46167273 -39271207 + AT_rich Low_complexity Low_complexity 1 24 0 2232 70 42 0 chr17 46167305 46167589 -39270891 - AluSp SINE Alu -17 296 1 23 0 0 0 chr17 46167837 46167860 -39270620 + AT_rich Low_complexity Low_complexity 1 23 0 1005 99 14 7 chr17 46168523 46168664 -39269816 + AluSx SINE Alu 1 142 -170 1299 85 6 6 chr17 46168775 46168951 -39269529 + AluSx SINE Alu 137 312 0 21 0 0 0 chr17 46169826 46169847 -39268633 + GC_rich Low_complexity Low_complexity 1 21 0 707 204 0 21 chr17 46169952 46170094 -39268386 + AluJb SINE Alu 162 300 -12 1872 206 60 53 chr17 46170101 46170257 -39268223 + L1ME1 LINE L1 5346 5499 -667 2598 55 0 3 chr17 46170257 46170569 -39267911 + AluY SINE Alu 1 308 -3 1872 206 60 53 chr17 46170569 46170935 -39267545 + L1ME1 LINE L1 5499 5869 -297 2386 86 0 3 chr17 46170986 46171287 -39267193 + AluSq SINE Alu 1 300 -13 300 271 82 87 chr17 46171280 46171660 -39266820 + L1MC3 LINE L1 3754 4129 -2017 321 304 72 55 chr17 46171722 46172013 -39266467 + L1MC3 LINE L1 4134 4426 -1720 2201 98 0 7 chr17 46172055 46172383 -39266097 + AluSx SINE Alu 2 327 0 312 253 189 50 chr17 46172403 46172426 -39266054 + L1MC3 LINE L1 5459 5477 -689 2227 104 0 0 chr17 46172426 46172713 -39265767 + AluSx SINE Alu 23 309 -3 312 253 189 50 chr17 46172713 46173023 -39265457 + L1MC3 LINE L1 5477 5528 -638 3339 112 42 27 chr17 46173023 46173123 -39265357 - MER1A DNA MER1_type -2173 527 430 2471 88 0 0 chr17 46173123 46173417 -39265063 - AluSg SINE Alu -16 294 1 3339 112 42 27 chr17 46173417 46173835 -39264645 - MER1A DNA MER1_type -2270 430 1 312 253 189 50 chr17 46173835 46173895 -39264585 + L1MC3 LINE L1 5528 5578 -588 455 338 97 14 chr17 46174278 46174556 -39263924 + L3 LINE CR1 1215 1515 -62 4838 138 35 25 chr17 46174920 46175837 -39262643 + L1MB3 LINE L1 5222 6150 -33 2529 66 7 0 chr17 46175837 46176141 -39262339 - AluY SINE Alu -3 308 3 4838 138 35 25 chr17 46176141 46176176 -39262304 + L1MB3 LINE L1 6150 6183 0 540 315 38 8 chr17 46176193 46176428 -39262052 + L1MC4a LINE L1 5583 5824 -297 403 318 45 62 chr17 46176517 46176696 -39261784 - MER5B DNA MER1_type -10 179 2 255 270 27 0 chr17 46177131 46177205 -39261275 + HAL1 LINE L1 6 81 -2426 * 898 313 15 22 chr17 46177189 46177591 -39260889 + HAL1 LINE L1 1158 1556 -951 467 270 52 0 chr17 46177713 46177828 -39260652 - L2 LINE L2 0 3313 3193 281 336 0 0 chr17 46177847 46177954 -39260526 + L1MC4a LINE L1 5793 5899 -1909 2374 101 0 0 chr17 46178244 46178552 -39259928 + AluY SINE Alu 1 308 -3 2453 93 3 0 chr17 46178656 46178967 -39259513 + AluSp SINE Alu 1 312 -1 234 0 0 0 chr17 46180116 46180142 -39258338 + (TG)n Simple_repeat Simple_repeat 2 27 0 180 269 241 0 chr17 46181063 46181171 -39257309 - MIR SINE MIR -4 258 125 2375 92 10 0 chr17 46181554 46181860 -39256620 + AluY SINE Alu 1 309 -2 2388 103 0 3 chr17 46182035 46182337 -39256143 + AluSg SINE Alu 1 301 -9 739 194 40 80 chr17 46182432 46182633 -39255847 - MER58A DNA MER1_type 0 224 32 440 320 81 52 chr17 46182699 46183068 -39255412 + L2 LINE L2 2596 2975 -339 216 316 61 10 chr17 46183178 46183276 -39255204 + L2 LINE L2 3192 3294 -19 197 395 110 9 chr17 46183736 46183964 -39254516 - L2 LINE L2 -786 2528 2278 2564 67 0 0 chr17 46184282 46184580 -39253900 - AluY SINE Alu -13 298 1 2254 101 0 7 chr17 46185129 46185442 -39253038 - AluSx SINE Alu 0 311 1 1835 103 0 8 chr17 46185618 46185861 -39252619 + AluSg/x SINE Alu 67 307 -3 2686 146 52 17 chr17 46185868 46186408 -39252072 + L1MB4 LINE L1 5621 6179 -1 439 262 48 0 chr17 46186465 46186610 -39251870 + L1MC5 LINE L1 7276 7427 -534 1168 187 10 10 chr17 46186646 46186849 -39251631 + AluJb SINE Alu 1 203 -109 523 154 85 156 chr17 46186972 46187101 -39251379 + L1ME LINE L1 5375 5489 -673 2183 131 3 0 chr17 46187101 46187399 -39251081 - AluSq SINE Alu -14 299 1 523 154 85 156 chr17 46187399 46187481 -39250999 + L1ME LINE L1 5489 5575 -587 360 0 0 0 chr17 46187723 46187763 -39250717 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 31 31 0 chr17 46188262 46188294 -39250186 - L2 LINE L2 -213 3059 3027 2494 83 0 0 chr17 46188348 46188650 -39249830 + AluY SINE Alu 1 302 -9 1214 171 0 19 chr17 46188651 46188861 -39249619 + AluJo SINE Alu 92 297 -15 204 40 0 0 chr17 46188861 46188886 -39249594 + (GGAGAA)n Simple_repeat Simple_repeat 1 25 0 1900 167 3 0 chr17 46189645 46189933 -39248547 - AluJo SINE Alu -11 301 13 338 287 11 0 chr17 46192045 46192139 -39246341 - MIR SINE MIR -79 129 35 823 232 38 40 chr17 46192709 46193091 -39245389 + MER113 DNA MER1_type? 1 446 -75 1645 178 34 14 chr17 46193313 46193606 -39244874 + AluJb SINE Alu 1 299 -13 402 282 95 35 chr17 46193860 46194067 -39244413 - MIR SINE MIR -27 235 9 610 153 134 19 chr17 46194375 46194390 -39244090 - L1MB7 LINE L1 0 6184 6172 2141 119 3 7 chr17 46194390 46194684 -39243796 + AluSq SINE Alu 1 293 -20 610 153 134 19 chr17 46194684 46194825 -39243655 - L1MB7 LINE L1 -12 6172 6010 1886 134 39 16 chr17 46194878 46195183 -39243297 - AluJb SINE Alu 0 312 1 1776 189 0 19 chr17 46195356 46195668 -39242812 + AluJb SINE Alu 1 306 -6 222 250 19 0 chr17 46195671 46195723 -39242757 + A-rich Low_complexity Low_complexity 2 54 0 2215 90 0 59 chr17 46195731 46196053 -39242427 + AluY SINE Alu 1 303 -8 201 138 0 0 chr17 46196063 46196092 -39242388 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1194 277 92 11 chr17 46196200 46196648 -39241832 - MLT1L LTR MaLR -6 609 126 1926 129 48 27 chr17 46196782 46197077 -39241403 + AluSx SINE Alu 1 301 -11 464 298 77 0 chr17 46197125 46197293 -39241187 - MIR SINE MIR -26 236 56 2191 103 11 0 chr17 46197808 46198117 -39240363 - AluSq SINE Alu 0 312 1 229 313 61 27 chr17 46198146 46198293 -39240187 + L2 LINE L2 3161 3312 -1 2239 112 0 0 chr17 46199311 46199606 -39238874 + AluSx SINE Alu 1 295 -17 187 306 111 14 chr17 46199613 46199757 -39238723 - L2 LINE L2 -153 3160 3003 1968 163 0 3 chr17 46200120 46200408 -39238072 + AluSx SINE Alu 1 287 -25 1704 88 0 9 chr17 46200411 46200628 -39237852 + AluSq SINE Alu 68 282 -31 329 267 89 53 chr17 46200628 46200853 -39237627 - L1MC5 LINE L1 -215 7746 7514 320 286 63 82 chr17 46200671 46200877 -39237603 + L1ME4a LINE L1 5770 5971 -150 * 245 256 37 37 chr17 46203465 46203547 -39234933 + C-rich Low_complexity Low_complexity 3 84 0 411 21 0 0 chr17 46207344 46207392 -39231088 + (TG)n Simple_repeat Simple_repeat 2 49 0 351 121 0 0 chr17 46207695 46207753 -39230727 + (TG)n Simple_repeat Simple_repeat 1 58 0 234 91 0 0 chr17 46209257 46209290 -39229190 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 274 344 0 11 chr17 46210465 46210555 -39227925 + MIR SINE MIR 35 123 -85 696 256 101 0 chr17 46210824 46211031 -39227449 + MIR SINE MIR 32 259 -3 2241 92 0 7 chr17 46211878 46212188 -39226292 - AluSx SINE Alu 0 308 1 295 289 207 0 chr17 46212796 46212931 -39225549 + MIR3 SINE MIR 29 191 -17 268 226 94 40 chr17 46212989 46213149 -39225331 + MIR SINE MIR 1 164 -65 2511 80 3 3 chr17 46213388 46213699 -39224781 + AluSq SINE Alu 1 311 -2 434 257 35 0 chr17 46215505 46215618 -39222862 + MIR3 SINE MIR 86 202 -6 2302 122 3 0 chr17 46216183 46216495 -39221985 - AluSq SINE Alu 0 313 1 182 182 0 0 chr17 46217152 46217185 -39221295 - MIR SINE MIR -113 149 117 2239 113 10 0 chr17 46217187 46217497 -39220983 + AluSp SINE Alu 1 313 0 428 278 53 0 chr17 46217643 46217776 -39220704 - MIR SINE MIR -59 203 64 1281 205 42 12 chr17 46217941 46218090 -39220390 - AluJo SINE Alu -27 285 123 2374 108 0 3 chr17 46218090 46218404 -39220076 - AluSq SINE Alu 0 313 1 1281 205 42 12 chr17 46218404 46218513 -39219967 - AluJo SINE Alu -189 123 19 680 113 0 0 chr17 46218566 46218663 -39219817 - LTR12 LTR ERV1 0 714 618 230 259 37 0 chr17 46218665 46218746 -39219734 - LTR30 LTR ERV1 -83 639 556 1275 123 211 4 chr17 46218779 46219007 -39219473 - LTR12 LTR ERV1 -439 275 1 378 279 27 0 chr17 46219126 46219237 -39219243 + MER115 DNA AcHobo 1 114 -579 2380 106 3 0 chr17 46219308 46219619 -39218861 + AluSx SINE Alu 1 312 0 239 280 150 10 chr17 46219903 46220003 -39218477 + MER115 DNA AcHobo 264 377 -316 1971 153 17 0 chr17 46220149 46220443 -39218037 - AluSx SINE Alu -13 299 1 264 222 0 56 chr17 46220449 46220472 -39218008 - L1ME3A LINE L1 -3 6167 6144 4058 179 53 35 chr17 46220472 46221127 -39217353 - MER21B LTR ERV1 -1 862 187 2328 94 7 7 chr17 46221127 46221435 -39217045 + AluSx SINE Alu 1 308 -4 4058 179 53 35 chr17 46221435 46221626 -39216854 - MER21B LTR ERV1 -676 187 1 264 222 0 56 chr17 46221626 46221674 -39216806 - L1ME3A LINE L1 -26 6144 6100 282 289 12 0 chr17 46221677 46221760 -39216720 + Zaphod DNA AcHobo 3905 3988 -43 282 95 0 0 chr17 46222026 46222068 -39216412 + (TTTAA)n Simple_repeat Simple_repeat 3 44 0 2139 108 0 0 chr17 46222069 46222357 -39216123 - AluSx SINE Alu -24 288 12 365 283 209 5 chr17 46222478 46222665 -39215815 + MIR SINE MIR 15 239 -23 209 317 0 0 chr17 46222781 46222841 -39215639 + L2 LINE L2 2992 3051 -221 246 410 37 0 chr17 46222870 46223004 -39215476 + L2 LINE L2 3129 3267 -5 185 328 49 41 chr17 46223146 46223268 -39215212 + L2 LINE L2 3127 3249 -23 2175 89 0 0 chr17 46223285 46223588 -39214892 + AluSx SINE Alu 1 303 0 392 296 38 32 chr17 46223760 46223946 -39214534 + MIR SINE MIR 20 206 -56 2236 119 0 0 chr17 46223948 46224258 -39214222 + AluSx SINE Alu 1 310 -2 2294 100 0 0 chr17 46224627 46224927 -39213553 - AluSc SINE Alu -9 300 1 2069 110 37 0 chr17 46225466 46225766 -39212714 + AluSx SINE Alu 1 311 -1 417 298 24 19 chr17 46225802 46226010 -39212470 - L1ME3A LINE L1 -219 5951 5743 406 304 22 0 chr17 46226042 46226176 -39212304 - L1ME3A LINE L1 -520 5650 5503 248 269 67 17 chr17 46226548 46226667 -39211813 - MER103 DNA DNA -40 126 2 447 263 232 11 chr17 46227174 46227364 -39211116 + MIR SINE MIR 2 233 -29 413 271 90 8 chr17 46227394 46227527 -39210953 - MIR SINE MIR 0 262 119 192 152 0 0 chr17 46227781 46227814 -39210666 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 249 98 0 0 chr17 46227813 46227854 -39210626 + (GA)n Simple_repeat Simple_repeat 1 41 0 2169 128 0 0 chr17 46228644 46228956 -39209524 + AluSx SINE Alu 1 312 0 255 274 27 27 chr17 46229215 46229288 -39209192 + MIR3 SINE MIR 117 189 -19 227 260 52 52 chr17 46229652 46229729 -39208751 + L2 LINE L2 3178 3254 -18 1789 158 0 25 chr17 46230393 46230710 -39207770 - AluJo SINE Alu -3 309 1 522 277 158 0 chr17 46230728 46230905 -39207575 + MIR SINE MIR 58 262 0 2061 132 0 0 chr17 46230921 46231216 -39207264 + AluSg SINE Alu 1 295 -15 1851 167 0 0 chr17 46231631 46231930 -39206550 - AluJo SINE Alu -8 304 6 2114 100 33 10 chr17 46232186 46232486 -39205994 + AluSx SINE Alu 1 307 -5 298 280 40 0 chr17 46233267 46233367 -39205113 + MER5B DNA MER1_type 75 178 0 404 282 41 12 chr17 46234029 46234198 -39204282 - L1MC5 LINE L1 -542 7495 7269 295 307 8 47 chr17 46234224 46234351 -39204129 - MER5B DNA MER1_type -39 139 18 232 220 186 0 chr17 46234583 46234642 -39203838 + L2 LINE L2 3198 3267 -5 219 317 96 0 chr17 46235531 46235635 -39202845 + L2 LINE L2 2986 3099 -173 2166 101 0 7 chr17 46235721 46236027 -39202453 - AluSx SINE Alu -8 304 1 577 279 76 6 chr17 46236132 46236304 -39202176 + MIR3 SINE MIR 14 197 -11 1960 152 0 9 chr17 46236458 46236773 -39201707 + AluJo SINE Alu 1 312 0 267 381 0 0 chr17 46237403 46237508 -39200972 + C-rich Low_complexity Low_complexity 3 107 0 2532 39 0 7 chr17 46238623 46238932 -39199548 + AluY SINE Alu 1 307 -4 222 171 24 0 chr17 46240140 46240181 -39198299 + L2 LINE L2 3261 3302 -11 182 402 0 0 chr17 46240228 46240310 -39198170 + L2 LINE L2 3228 3309 -4 366 267 125 29 chr17 46241740 46241876 -39196604 + MIR3 SINE MIR 8 159 -49 1460 170 90 0 chr17 46241967 46242267 -39196213 - L1MB4 LINE L1 -31 6149 5823 299 170 0 0 chr17 46242268 46242321 -39196159 - Alu SINE Alu -3 299 247 1652 171 14 62 chr17 46242328 46242443 -39196037 - L1MB4 LINE L1 -244 5936 5817 1931 108 34 10 chr17 46242443 46242740 -39195740 - AluSx SINE Alu -5 307 4 1652 171 14 62 chr17 46242740 46242901 -39195579 - L1MB4 LINE L1 -363 5817 5680 2184 66 42 3 chr17 46242901 46243188 -39195292 - AluY SINE Alu -11 300 3 1652 171 14 62 chr17 46243188 46243279 -39195201 - L1MB4 LINE L1 -500 5680 5586 1998 139 3 0 chr17 46243640 46243935 -39194545 + AluSg SINE Alu 1 296 -14 459 0 0 0 chr17 46244591 46244642 -39193838 + (TG)n Simple_repeat Simple_repeat 1 51 0 276 325 26 42 chr17 46244772 46244963 -39193517 - L2 LINE L2 -172 3100 2913 436 227 55 0 chr17 46245656 46245766 -39192714 - MIR SINE MIR -119 143 28 771 214 138 11 chr17 46245859 46246075 -39192405 + MIR SINE MIR 21 260 -2 1148 118 0 0 chr17 46246462 46246623 -39191857 - AluSg/x SINE Alu -6 306 146 259 273 15 0 chr17 46246770 46246836 -39191644 + G-rich Low_complexity Low_complexity 4 70 0 505 242 31 62 chr17 46247154 46247315 -39191165 + MIR SINE MIR 93 248 -14 485 283 90 29 chr17 46247516 46247760 -39190720 + MIR SINE MIR 2 260 -2 2546 56 0 0 chr17 46247783 46248089 -39190391 + AluY SINE Alu 1 306 -5 197 293 164 26 chr17 46248419 46248535 -39189945 + MIR SINE MIR 89 220 -42 31 68 0 0 chr17 46251715 46251774 -39186706 + GC_rich Low_complexity Low_complexity 1 59 0 249 33 0 0 chr17 46251787 46251817 -39186663 + (CGGGGG)n Simple_repeat Simple_repeat 5 34 0 22 35 0 0 chr17 46251856 46251885 -39186595 + GC_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr17 46251907 46251930 -39186550 + (CGCGG)n Simple_repeat Simple_repeat 1 23 0 56 61 0 0 chr17 46251960 46252058 -39186422 + GC_rich Low_complexity Low_complexity 1 98 0 33 85 0 0 chr17 46252173 46252255 -39186225 + GC_rich Low_complexity Low_complexity 1 82 0 183 286 17 84 chr17 46253342 46253461 -39185019 + MIR SINE MIR 38 148 -114 374 209 19 38 chr17 46254225 46254330 -39184150 + MIR SINE MIR 47 149 -113 2160 84 37 0 chr17 46254344 46254643 -39183837 - AluSx SINE Alu 0 312 3 2089 89 3 14 chr17 46255602 46255921 -39182559 + AluSx SINE Alu 1 312 0 335 248 168 0 chr17 46256042 46256144 -39182336 + MIR SINE MIR 30 147 -65 211 336 115 10 chr17 46256644 46256748 -39181732 + MIR SINE MIR 22 136 -126 2205 81 7 0 chr17 46257268 46257563 -39180917 - AluSx SINE Alu -15 297 1 242 380 39 0 chr17 46257789 46257918 -39180562 + MIR SINE MIR 94 227 -35 287 275 18 46 chr17 46258375 46258484 -39179996 + MIR SINE MIR 37 142 -66 249 57 0 0 chr17 46259824 46259859 -39178621 + (T)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr17 46261033 46261057 -39177423 + AT_rich Low_complexity Low_complexity 1 24 0 30 0 0 0 chr17 46261085 46261115 -39177365 + AT_rich Low_complexity Low_complexity 1 30 0 2295 102 0 10 chr17 46262056 46262370 -39176110 + AluSx SINE Alu 1 311 -1 2170 108 67 20 chr17 46262651 46262993 -39175487 - MER46B DNA MER2_type 0 236 4 1818 142 16 19 chr17 46263030 46263340 -39175140 - AluJo SINE Alu -3 309 1 1204 182 75 18 chr17 46263425 46263705 -39174775 - AluJo SINE Alu -16 296 1 225 260 10 58 chr17 46263873 46263977 -39174503 + GA-rich Low_complexity Low_complexity 2 100 0 1972 112 14 3 chr17 46264474 46264768 -39173712 - AluSq SINE Alu -16 297 1 1995 118 20 3 chr17 46265678 46265974 -39172506 - AluSx SINE Alu -10 302 2 198 103 0 0 chr17 46269331 46269360 -39169120 + (T)n Simple_repeat Simple_repeat 1 29 0 186 43 0 0 chr17 46269522 46269545 -39168935 + (A)n Simple_repeat Simple_repeat 1 23 0 2222 82 7 7 chr17 46270623 46270927 -39167553 + AluSx SINE Alu 1 304 -8 1823 166 0 0 chr17 46270936 46271240 -39167240 + AluJb SINE Alu 1 304 0 289 250 80 11 chr17 46271243 46271331 -39167149 - L2 LINE L2 -20 3293 3200 343 271 8 45 chr17 46271691 46271824 -39166656 + MIR3 SINE MIR 60 187 -21 1306 118 49 0 chr17 46273128 46273332 -39165148 + MER46A DNA MER2_type 1 214 -22 2132 109 0 0 chr17 46273345 46273621 -39164859 - AluSx SINE Alu -36 276 1 225 162 0 0 chr17 46273621 46273658 -39164822 + MER46A DNA MER2_type 200 236 0 22 35 0 0 chr17 46274445 46274474 -39164006 + AT_rich Low_complexity Low_complexity 1 29 0 3550 239 135 34 chr17 46274490 46275280 -39163200 - HAL1 LINE L1 -93 2414 1706 2171 112 6 19 chr17 46275280 46275592 -39162888 + AluSp SINE Alu 1 308 -5 3550 239 135 34 chr17 46275592 46276121 -39162359 - HAL1 LINE L1 -801 1706 1232 1761 167 3 0 chr17 46276121 46276403 -39162077 + AluJb SINE Alu 10 292 -20 3550 239 135 34 chr17 46276403 46276806 -39161674 - HAL1 LINE L1 -1275 1232 516 339 271 0 127 chr17 46276817 46276983 -39161497 - MIR SINE MIR -70 192 48 330 278 81 81 chr17 46277566 46277814 -39160666 - L2 LINE L2 -126 3146 2899 292 252 23 84 chr17 46280142 46280273 -39158207 + MIR SINE MIR 63 185 -77 483 270 135 48 chr17 46280979 46281312 -39157168 + L2 LINE L2 2950 3311 -2 1958 105 58 0 chr17 46281638 46281932 -39156548 + AluSq SINE Alu 1 311 -2 402 240 50 125 chr17 46282408 46282608 -39155872 - MIR3 SINE MIR -8 200 16 1780 144 0 0 chr17 46282780 46283043 -39155437 + AluSq SINE Alu 49 311 -2 617 147 134 100 chr17 46283617 46283711 -39154769 - ORSL DNA AcHobo 0 275 186 1820 98 0 4 chr17 46283711 46283947 -39154533 + AluSx SINE Alu 18 252 -60 617 147 134 100 chr17 46283947 46284083 -39154397 - ORSL DNA AcHobo -89 186 37 1935 151 0 7 chr17 46284131 46284301 -39154179 - AluJb SINE Alu -7 305 136 2382 92 0 3 chr17 46284301 46284605 -39153875 - AluSx SINE Alu -7 305 3 1935 151 0 7 chr17 46284605 46284739 -39153741 - AluJb SINE Alu -176 136 3 1021 113 0 0 chr17 46284742 46284875 -39153605 - AluJb SINE Alu -179 133 1 1770 178 4 0 chr17 46285461 46285768 -39152712 + AluJb SINE Alu 1 308 0 339 25 0 0 chr17 46286072 46286112 -39152368 + (CA)n Simple_repeat Simple_repeat 2 41 0 492 200 43 0 chr17 46286255 46286370 -39152110 - MER53 DNA DNA -68 121 2 419 286 48 16 chr17 46286370 46286496 -39151984 - MER91A DNA MER1_type -55 141 12 209 286 71 0 chr17 46286503 46286559 -39151921 + L2 LINE L2 3151 3210 -62 459 180 18 9 chr17 46287052 46287163 -39151317 - L1ME4a LINE L1 -1 6120 6009 2129 131 0 3 chr17 46287719 46288010 -39150470 - AluSx SINE Alu -20 292 3 279 293 95 48 chr17 46288037 46288184 -39150296 - MIR SINE MIR -50 212 59 1730 175 27 3 chr17 46288603 46288900 -39149580 - AluJo SINE Alu -8 304 1 3174 166 121 25 chr17 46292167 46292895 -39145585 - L1MB8 LINE L1 -16 6162 5365 721 163 0 39 chr17 46295068 46295197 -39143283 - FLAM_A SINE Alu -9 124 1 22 0 0 0 chr17 46295656 46295678 -39142802 + AT_rich Low_complexity Low_complexity 1 22 0 277 276 17 78 chr17 46296529 46296645 -39141835 - MIR SINE MIR -61 201 93 215 233 206 14 chr17 46298349 46298422 -39140058 + L2 LINE L2 3137 3223 -49 261 359 77 17 chr17 46298581 46298698 -39139782 + L2 LINE L2 3149 3272 0 226 319 172 18 chr17 46298711 46298880 -39139600 - L2 LINE L2 -997 2317 2123 371 365 88 6 chr17 46298889 46299059 -39139421 - L2 LINE L2 0 3272 3089 943 252 48 51 chr17 46299077 46299430 -39139050 + MLT1I LTR MaLR 52 403 -6 654 323 86 47 chr17 46299430 46300033 -39138447 - L2 LINE L2 -200 3072 2428 334 270 21 129 chr17 46304485 46304811 -39133669 + L1ME4a LINE L1 5382 5672 -449 680 245 69 20 chr17 46304827 46305031 -39133449 - MIR SINE MIR 0 262 49 640 225 28 0 chr17 46305145 46305323 -39133157 - L1MA4 LINE L1 -2 6298 6116 2296 95 0 3 chr17 46305948 46306244 -39132236 - AluSg SINE Alu -15 295 1 1912 153 90 12 chr17 46306245 46306656 -39131824 - L1MA4 LINE L1 -189 6111 5669 317 177 221 57 chr17 46306656 46306814 -39131666 + L1ME4a LINE L1 5708 5891 -230 2483 64 0 3 chr17 46307118 46307414 -39131066 + AluY SINE Alu 1 295 -16 21 0 0 0 chr17 46307729 46307750 -39130730 + AT_rich Low_complexity Low_complexity 1 21 0 219 241 86 0 chr17 46309059 46309117 -39129363 + MIR3 SINE MIR 142 204 -4 221 269 0 0 chr17 46309599 46309651 -39128829 + (CATATA)n Simple_repeat Simple_repeat 3 54 0 1733 323 107 21 chr17 46310297 46311291 -39127189 + L2 LINE L2 1451 2529 -785 484 297 14 7 chr17 46311269 46311417 -39127063 + MIR SINE MIR 106 254 -8 * 578 310 93 42 chr17 46311446 46311985 -39126495 + L2 LINE L2 2511 3125 -147 317 341 156 33 chr17 46312003 46312279 -39126201 + L2 LINE L2 2959 3268 -4 2340 86 0 10 chr17 46313881 46314182 -39124298 + AluSx SINE Alu 1 298 -14 2331 103 0 0 chr17 46314553 46314846 -39123634 + AluSc SINE Alu 1 296 -13 243 0 0 0 chr17 46314846 46314873 -39123607 + (TA)n Simple_repeat Simple_repeat 1 27 0 2190 119 7 7 chr17 46314884 46315186 -39123294 + AluSx SINE Alu 1 302 -10 4227 158 21 19 chr17 46315195 46315626 -39122854 + L1MB3 LINE L1 5364 5799 -384 2208 120 3 3 chr17 46315626 46315926 -39122554 - AluSx SINE Alu -12 300 1 4227 158 21 19 chr17 46315926 46316304 -39122176 + L1MB3 LINE L1 5799 6175 -8 269 275 148 13 chr17 46316321 46316525 -39121955 + L1ME3A LINE L1 5263 5438 -732 2416 100 0 0 chr17 46316525 46316834 -39121646 + AluSx SINE Alu 1 309 -3 269 275 148 13 chr17 46316834 46317144 -39121336 + L1ME3A LINE L1 5438 5855 -315 3463 112 42 27 chr17 46317144 46317244 -39121236 - MER1A DNA MER1_type -2173 527 430 2427 88 0 0 chr17 46317244 46317538 -39120942 - AluSg SINE Alu -16 294 1 3463 112 42 27 chr17 46317538 46317956 -39120524 - MER1A DNA MER1_type -2270 430 1 269 275 148 13 chr17 46317956 46318016 -39120464 + L1ME3A LINE L1 5855 5906 -264 532 338 97 14 chr17 46318399 46318677 -39119803 + L3 LINE CR1 1215 1515 -62 4720 135 37 17 chr17 46319041 46319957 -39118523 + L1MB3 LINE L1 5222 6154 -29 2501 65 7 0 chr17 46319966 46320273 -39118207 - AluY SINE Alu 0 311 3 483 324 36 14 chr17 46320327 46320546 -39117934 + L1MC/D LINE L1 5585 5808 -2000 415 318 45 62 chr17 46320649 46320828 -39117652 - MER5B DNA MER1_type -10 179 2 233 270 27 0 chr17 46321263 46321337 -39117143 + HAL1 LINE L1 6 81 -2426 * 778 313 15 22 chr17 46321321 46321723 -39116757 + HAL1 LINE L1 1158 1556 -951 502 270 52 0 chr17 46321845 46321960 -39116520 - L2 LINE L2 0 3313 3193 253 336 0 0 chr17 46321979 46322086 -39116394 + L1MC/D LINE L1 5793 5899 -1909 2308 101 0 0 chr17 46322376 46322684 -39115796 + AluY SINE Alu 1 308 -3 2398 93 3 0 chr17 46322788 46323099 -39115381 + AluSp SINE Alu 1 312 -1 216 0 0 0 chr17 46324248 46324272 -39114208 + (TG)n Simple_repeat Simple_repeat 2 25 0 206 241 241 0 chr17 46325193 46325301 -39113179 - MIR SINE MIR -4 258 125 2310 88 10 0 chr17 46325684 46325990 -39112490 + AluY SINE Alu 1 309 -2 2296 103 0 3 chr17 46326165 46326465 -39112015 + AluSg SINE Alu 1 299 -11 763 192 39 87 chr17 46326563 46326771 -39111709 - MER58A DNA MER1_type 0 224 27 498 311 84 54 chr17 46326830 46327236 -39111244 + L2 LINE L2 2596 3006 -307 218 293 73 12 chr17 46327325 46327407 -39111073 + L2 LINE L2 3208 3294 -19 252 386 119 9 chr17 46327867 46328077 -39110403 - L2 LINE L2 -786 2528 2296 189 351 149 22 chr17 46328223 46328357 -39110123 + L2 LINE L2 3117 3267 -5 2483 67 0 0 chr17 46328413 46328710 -39109770 - AluY SINE Alu -14 297 1 2156 108 0 7 chr17 46329259 46329572 -39108908 - AluSx SINE Alu 0 311 1 2301 92 0 0 chr17 46331622 46331916 -39106564 + AluSx SINE Alu 1 294 -18 2129 121 0 0 chr17 46332061 46332362 -39106118 - AluSx SINE Alu 0 301 1 818 206 40 54 chr17 46332462 46332685 -39105795 + AluJo SINE Alu 1 220 -92 22 0 0 0 chr17 46332883 46332905 -39105575 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 46333032 46333052 -39105428 + (TA)n Simple_repeat Simple_repeat 2 21 0 2405 46 3 30 chr17 46333052 46333356 -39105124 - AluY SINE Alu -15 296 1 516 271 55 107 chr17 46333360 46333501 -39104979 - L1ME4a LINE L1 -296 5825 5678 1974 148 3 7 chr17 46333501 46333806 -39104674 - AluJo SINE Alu -8 304 1 516 271 55 107 chr17 46333806 46334121 -39104359 - L1ME4a LINE L1 -443 5678 5393 1980 120 18 0 chr17 46334332 46334616 -39103864 - AluSx SINE Alu -23 289 1 234 269 0 0 chr17 46335047 46335114 -39103366 - L1ME4a LINE L1 -1443 4703 4637 21 0 0 0 chr17 46335141 46335162 -39103318 + AT_rich Low_complexity Low_complexity 1 21 0 443 272 108 87 chr17 46335182 46335317 -39103163 - L1ME4a LINE L1 -1544 4602 4471 923 144 0 0 chr17 46335317 46335449 -39103031 - FLAM_C SINE Alu 0 133 2 443 272 108 87 chr17 46335449 46335740 -39102740 - L1ME4a LINE L1 -1675 4471 4167 26 30 0 0 chr17 46336657 46336690 -39101790 + AT_rich Low_complexity Low_complexity 1 33 0 1713 226 43 14 chr17 46336719 46337139 -39101341 + L1ME1 LINE L1 5694 6125 -41 1261 144 204 26 chr17 46338541 46338854 -39099626 + Looper DNA T2_type 2 370 -1188 2013 86 86 0 chr17 46338854 46339155 -39099325 - L1P LINE L1 -1057 5089 4763 4029 54 65 2 chr17 46339157 46339696 -39098784 + L1PA7 LINE L1 5575 6147 -7 4037 183 51 36 chr17 46339713 46340650 -39097830 + Looper DNA T2_type 395 1345 -213 403 123 0 0 chr17 46340650 46340707 -39097773 + Tigger4(Zombi) DNA MER2_type 1 57 -2674 1929 145 0 7 chr17 46340764 46341054 -39097426 + AluJo SINE Alu 1 288 -24 3033 126 19 2 chr17 46341076 46341553 -39096927 + Tigger4(Zombi) DNA MER2_type 2197 2681 -50 699 196 72 5 chr17 46341555 46341749 -39096731 + Looper DNA T2_type 1351 1557 -1 1804 166 10 0 chr17 46342178 46342468 -39096012 - AluJb SINE Alu -18 294 2 903 274 121 50 chr17 46342495 46343805 -39094675 - L1ME LINE L1 -397 5750 4339 1686 111 0 8 chr17 46343970 46344204 -39094276 - AluSq SINE Alu -13 300 69 21 0 0 0 chr17 46344325 46344346 -39094134 + AT_rich Low_complexity Low_complexity 1 21 0 597 251 56 80 chr17 46344347 46344780 -39093700 - L1ME3A LINE L1 -2 6160 5756 * 911 294 89 28 chr17 46344773 46345665 -39092815 - L1MEd LINE L1 -4780 1530 552 511 312 61 29 chr17 46346080 46346625 -39091855 - L1MEd LINE L1 -4585 1725 1164 487 194 44 50 chr17 46346636 46346796 -39091684 - L1MEd LINE L1 -5044 1075 917 943 214 0 0 chr17 46346874 46347042 -39091438 - FRAM SINE Alu -16 160 1 481 271 86 115 chr17 46347047 46347148 -39091332 - L1MEd LINE L1 -5562 557 455 2348 94 3 0 chr17 46347148 46347455 -39091025 + AluSp SINE Alu 1 308 -5 481 271 86 115 chr17 46347455 46347925 -39090555 - L1MEd LINE L1 -5664 455 3 213 39 0 0 chr17 46348016 46348042 -39090438 + (TG)n Simple_repeat Simple_repeat 2 27 0 269 178 0 0 chr17 46348099 46348144 -39090336 + MLT2D LTR ERVL 316 360 -54 1165 243 116 32 chr17 46348153 46348531 -39089949 - MLT2B2 LTR ERVL -96 419 10 412 195 11 11 chr17 46349576 46349663 -39088817 + FLAM_A SINE Alu 44 130 -3 26 0 0 0 chr17 46349686 46349712 -39088768 + AT_rich Low_complexity Low_complexity 1 26 0 360 0 0 0 chr17 46349725 46349765 -39088715 + (CA)n Simple_repeat Simple_repeat 2 41 0 1328 151 24 0 chr17 46349766 46349978 -39088502 + L1PB3 LINE L1 5792 6008 -146 1009 154 6 18 chr17 46350013 46350182 -39088298 + L1PB3 LINE L1 5981 6147 -7 258 327 83 43 chr17 46351175 46351429 -39087051 + L2 LINE L2 1171 1434 -1880 195 339 68 34 chr17 46351511 46351629 -39086851 + L2 LINE L2 3096 3217 -55 383 364 24 77 chr17 46352290 46352746 -39085734 - L2 LINE L2 -5 3267 2836 182 258 0 32 chr17 46353628 46353690 -39084790 - L2 LINE L2 -832 2482 2423 183 274 132 19 chr17 46353889 46353995 -39084485 - L2 LINE L2 -1294 2020 1903 893 173 26 6 chr17 46354857 46355013 -39083467 - FRAM SINE Alu -23 153 1 1771 263 78 54 chr17 46355294 46356066 -39082414 - L2 LINE L2 -1850 1464 675 495 249 362 0 chr17 46356337 46356522 -39081958 + MIR SINE MIR 9 260 -2 1688 170 14 5 chr17 46356905 46357332 -39081148 + L1MA4A LINE L1 5788 6279 -24 27 62 0 0 chr17 46358669 46358717 -39079763 + AT_rich Low_complexity Low_complexity 1 48 0 2102 98 44 0 chr17 46358717 46358992 -39079488 - AluSx SINE Alu -23 289 3 1983 112 10 10 chr17 46359197 46359491 -39078989 - AluJb SINE Alu -18 294 1 386 292 94 12 chr17 46360285 46360456 -39078024 - MER5A DNA MER1_type -1 188 4 1211 321 108 24 chr17 46360612 46361232 -39077248 + L3 LINE CR1 790 1461 -116 1128 157 16 0 chr17 46361292 46361477 -39077003 + AluSx SINE Alu 25 212 -100 426 73 0 0 chr17 46361477 46361532 -39076948 + AluSq/x SINE Alu 78 132 -180 2150 111 0 14 chr17 46361532 46361664 -39076816 + AluSx SINE Alu 1 133 -179 2367 67 0 0 chr17 46361664 46361977 -39076503 + AluY SINE Alu 1 313 0 2150 111 0 14 chr17 46361977 46362171 -39076309 + AluSx SINE Alu 133 312 0 312 266 38 0 chr17 46362171 46362250 -39076230 + L3 LINE CR1 1492 1573 -4 671 150 87 82 chr17 46362696 46362903 -39075577 - MER109 Unknown Unknown -1240 1192 985 374 205 0 48 chr17 46362903 46362986 -39075494 + Tigger5 DNA MER2_type 1 79 -2244 364 200 13 0 chr17 46362986 46363061 -39075419 - Tigger5 DNA MER2_type -3 2320 2245 * 394 153 0 0 chr17 46363054 46363113 -39075367 + Tigger5 DNA MER2_type 2242 2300 -23 1487 185 143 84 chr17 46363126 46363720 -39074760 - MER109 Unknown Unknown -1444 988 360 625 278 113 25 chr17 46363723 46364273 -39074207 - MER109 Unknown Unknown -1770 662 60 263 213 241 14 chr17 46364661 46364802 -39073678 + L1ME4a LINE L1 5947 6119 -2 429 250 14 65 chr17 46364886 46365086 -39073394 - MIR SINE MIR -31 231 39 209 216 54 95 chr17 46365170 46365211 -39073269 + MER5A DNA MER1_type 119 157 -32 1875 132 61 0 chr17 46365211 46365491 -39072989 + AluSx SINE Alu 1 297 -15 209 216 54 95 chr17 46365491 46365523 -39072957 + MER5A DNA MER1_type 157 189 0 216 130 0 0 chr17 46365554 46365600 -39072880 + (A)n Simple_repeat Simple_repeat 1 46 0 212 289 0 19 chr17 46365704 46365756 -39072724 - L2 LINE L2 -9 3263 3213 279 299 205 8 chr17 46366049 46366166 -39072314 - MIR3 SINE MIR -49 159 20 512 284 55 15 chr17 46366259 46366460 -39072020 + L1ME4a LINE L1 5567 5775 -346 263 253 60 47 chr17 46366587 46366737 -39071743 + L1ME4a LINE L1 5951 6102 -19 256 313 119 45 chr17 46367017 46367151 -39071329 + MIR3 SINE MIR 2 145 -63 1459 162 112 0 chr17 46369643 46369760 -39068720 + AluJo SINE Alu 1 104 -208 462 18 0 0 chr17 46369760 46369815 -39068665 + (CA)n Simple_repeat Simple_repeat 2 56 0 1459 162 112 0 chr17 46369815 46369956 -39068524 + AluJo SINE Alu 104 288 -24 1382 319 106 50 chr17 46370671 46371884 -39066596 - L2 LINE L2 -18 3254 1972 452 218 400 27 chr17 46372314 46372539 -39065941 - MER5C DNA MER1_type 0 324 16 740 165 38 8 chr17 46372676 46372809 -39065671 + MER20 DNA MER1_type 83 219 0 22 35 0 0 chr17 46373297 46373326 -39065154 + AT_rich Low_complexity Low_complexity 1 29 0 327 167 0 42 chr17 46373534 46373606 -39064874 + MER20 DNA MER1_type 141 209 -10 903 247 34 17 chr17 46373712 46373947 -39064533 + MIR SINE MIR 3 241 -21 48 0 0 0 chr17 46374610 46374658 -39063822 + AT_rich Low_complexity Low_complexity 1 48 0 826 155 0 0 chr17 46374658 46374774 -39063706 - FLAM_C SINE Alu -17 116 1 2555 55 3 0 chr17 46377014 46377324 -39061156 - AluY SINE Alu 0 311 1 25 31 0 0 chr17 46377978 46378010 -39060470 + AT_rich Low_complexity Low_complexity 1 32 0 741 114 30 0 chr17 46381225 46381356 -39057124 + L1MA6 LINE L1 6165 6299 -1 315 239 174 0 chr17 46381651 46381760 -39056720 + L1ME4a LINE L1 5782 5909 -212 31 0 0 0 chr17 46381803 46381834 -39056646 + AT_rich Low_complexity Low_complexity 1 31 0 1381 175 89 22 chr17 46382188 46382548 -39055932 + L1MD3 LINE L1 7602 7985 -10 350 178 133 0 chr17 46382550 46382640 -39055840 + Charlie5 DNA MER1_type 2523 2624 0 429 278 75 35 chr17 46383842 46384015 -39054465 - MIR SINE MIR -71 191 12 256 329 12 0 chr17 46384064 46384149 -39054331 - L2 LINE L2 -2 3270 3185 538 229 21 36 chr17 46384521 46384661 -39053819 + L2 LINE L2 3172 3309 -4 245 329 38 0 chr17 46384660 46384739 -39053741 + MIR SINE MIR 54 135 -73 * 960 80 64 0 chr17 46384739 46384864 -39053616 + AluSq/x SINE Alu 1 133 -179 2050 156 3 0 chr17 46384870 46385178 -39053302 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 46385178 46385201 -39053279 + AT_rich Low_complexity Low_complexity 1 23 0 208 284 30 15 chr17 46385201 46385268 -39053212 + MIR3 SINE MIR 126 193 -15 1701 162 53 7 chr17 46385357 46385641 -39052839 - AluJb SINE Alu -15 297 1 2475 53 0 3 chr17 46386393 46386696 -39051784 + AluY SINE Alu 1 302 -9 447 52 0 0 chr17 46387717 46387775 -39050705 + (CA)n Simple_repeat Simple_repeat 1 58 0 227 316 41 20 chr17 46388698 46388796 -39049684 + MIR3 SINE MIR 96 195 -13 2204 120 0 0 chr17 46388860 46389152 -39049328 - AluSx SINE Alu -20 292 1 2440 69 7 3 chr17 46389382 46389686 -39048794 + AluSp SINE Alu 1 305 -8 596 251 59 11 chr17 46389803 46389990 -39048490 + L1ME LINE L1 5618 5813 -349 407 152 39 3 chr17 46390010 46390244 -39048236 + AluJb SINE Alu 1 312 0 2118 114 7 3 chr17 46390280 46390569 -39047911 + AluSq SINE Alu 1 290 -23 2160 133 0 0 chr17 46390764 46391065 -39047415 + AluSx SINE Alu 1 301 -11 2180 100 0 0 chr17 46392067 46392369 -39046111 + AluSc SINE Alu 1 302 0 405 0 0 0 chr17 46392446 46392491 -39045989 + (TG)n Simple_repeat Simple_repeat 2 46 0 394 165 121 22 chr17 46392531 46392622 -39045858 + L1MC4 LINE L1 7920 8019 -23 1818 192 70 25 chr17 46393255 46393698 -39044782 + MLT1C LTR MaLR 1 463 -4 2506 121 6 6 chr17 46394482 46394846 -39043634 + THE1B LTR MaLR 1 364 0 382 240 10 20 chr17 46394854 46394954 -39043526 + MIR SINE MIR 141 239 -23 21 0 0 0 chr17 46394960 46394981 -39043499 + AT_rich Low_complexity Low_complexity 1 21 0 1366 156 52 85 chr17 46395210 46395517 -39042963 - AluJo SINE Alu -11 301 5 735 153 0 0 chr17 46395526 46395644 -39042836 - AluJb SINE Alu -5 307 190 1815 93 8 0 chr17 46395821 46396067 -39042413 + AluSq SINE Alu 1 248 -65 673 182 0 0 chr17 46396067 46396177 -39042303 - MER2 DNA MER2_type -232 113 4 2182 108 10 7 chr17 46396336 46396642 -39041838 + AluSx SINE Alu 1 307 -5 2267 80 10 3 chr17 46396642 46396930 -39041550 + AluSc SINE Alu 8 297 -12 475 268 164 11 chr17 46397382 46397565 -39040915 - MIR SINE MIR -18 244 34 800 221 37 43 chr17 46397674 46397969 -39040511 + L1MC5 LINE L1 6958 7250 -733 497 172 104 49 chr17 46398042 46398205 -39040275 + L1MB3 LINE L1 5970 6141 -42 662 238 0 0 chr17 46398208 46398330 -39040150 + FLAM_A SINE Alu 1 122 -11 2846 155 26 26 chr17 46398496 46398685 -39039795 + L1MB3 LINE L1 5608 5796 -387 1878 161 3 10 chr17 46398685 46398989 -39039491 - AluSx SINE Alu -10 302 1 2846 155 26 26 chr17 46398989 46399367 -39039113 + L1MB3 LINE L1 5795 6175 -8 267 270 102 0 chr17 46399384 46399521 -39038959 + L1M LINE L1 5263 5413 -767 2556 66 0 0 chr17 46399647 46399952 -39038528 - AluY SINE Alu -6 305 1 840 227 88 48 chr17 46400042 46400394 -39038086 + MLT1B LTR MaLR 21 386 -4 296 234 0 0 chr17 46400403 46400480 -39038000 - L1M4 LINE L1 -991 5155 5079 496 183 11 0 chr17 46400644 46400737 -39037743 + Charlie5 DNA MER1_type 1 94 -2518 452 309 68 8 chr17 46400753 46401119 -39037361 - L1M4 LINE L1 -3557 2589 2202 1742 138 28 25 chr17 46401141 46401447 -39037033 - AluSx SINE Alu 0 307 1 455 184 10 29 chr17 46401635 46401738 -39036742 + LTR39 LTR ERV1 676 776 -7 402 191 138 86 chr17 46401884 46402036 -39036444 - MER69 DNA AcHobo 0 2526 18 298 250 21 100 chr17 46402602 46402742 -39035738 + L2 LINE L2 3181 3309 -4 459 0 0 0 chr17 46402814 46402865 -39035615 + (ATG)n Simple_repeat Simple_repeat 2 52 0 2029 115 21 0 chr17 46402865 46403167 -39035313 - AluSx SINE Alu 0 308 1 684 74 0 21 chr17 46403701 46403796 -39034684 + AluS SINE Alu 1 93 -219 533 127 0 0 chr17 46403801 46403880 -39034600 - AluSg/x SINE Alu -55 255 177 250 298 0 11 chr17 46403986 46404080 -39034400 - Charlie7 DNA MER1_type -1893 719 627 2194 100 0 3 chr17 46404086 46404375 -39034105 + AluY SINE Alu 1 288 -23 288 0 0 0 chr17 46404378 46404410 -39034070 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 1794 113 47 4 chr17 46404415 46404690 -39033790 + AluSx SINE Alu 1 287 -25 292 248 0 59 chr17 46404721 46404822 -39033658 - Charlie7 DNA MER1_type -2512 100 6 2484 77 0 0 chr17 46404951 46405249 -39033231 + AluY SINE Alu 1 298 -13 1475 189 77 7 chr17 46405419 46405704 -39032776 + AluJb SINE Alu 1 305 -7 1781 134 0 18 chr17 46405852 46406129 -39032351 - AluSx SINE Alu -22 290 19 293 229 46 51 chr17 46406150 46406325 -39032155 + L1MC5 LINE L1 7591 7764 -197 290 222 0 25 chr17 46406338 46406419 -39032061 + L1MC5 LINE L1 7835 7913 -48 2392 82 3 9 chr17 46406792 46407133 -39031347 + AluSp SINE Alu 1 313 0 308 195 85 0 chr17 46407136 46407218 -39031262 - MER2 DNA MER2_type -135 210 122 2172 120 0 0 chr17 46407218 46407510 -39030970 + AluSx SINE Alu 1 292 -20 1371 193 61 24 chr17 46407914 46408210 -39030270 + AluJo SINE Alu 5 311 -1 23 33 0 0 chr17 46408947 46408977 -39029503 + AT_rich Low_complexity Low_complexity 1 30 0 759 194 0 8 chr17 46409179 46409313 -39029167 - FLAM_A SINE Alu 0 133 1 2070 151 7 0 chr17 46409898 46410203 -39028277 - AluSx SINE Alu -5 307 1 536 243 159 22 chr17 46410250 46410476 -39028004 - MIR SINE MIR -1 261 5 226 271 159 19 chr17 46410934 46411041 -39027439 + MLT1K LTR MaLR 3 124 -464 291 214 162 17 chr17 46411223 46411340 -39027140 + MLT1K LTR MaLR 453 586 -2 2126 97 0 88 chr17 46411728 46412057 -39026423 - AluSp SINE Alu -13 300 1 451 269 125 39 chr17 46412238 46412461 -39026019 - L1MEd LINE L1 -4691 1619 1417 2335 82 14 0 chr17 46412461 46412755 -39025725 - AluSp SINE Alu -15 298 1 451 269 125 39 chr17 46412755 46413115 -39025365 - L1MEd LINE L1 -4893 1417 953 763 313 28 33 chr17 46413126 46413551 -39024929 - L1MEd LINE L1 -5238 881 459 370 221 108 94 chr17 46413785 46413927 -39024553 - L1MEd LINE L1 -5893 226 79 1764 169 0 17 chr17 46413927 46414223 -39024257 + AluJo SINE Alu 2 292 -20 370 221 108 94 chr17 46414223 46414293 -39024187 - L1MEd LINE L1 -6040 79 11 825 235 27 0 chr17 46414472 46414655 -39023825 - MER5A DNA MER1_type -1 188 1 1901 113 34 4 chr17 46415757 46416023 -39022457 - AluSx SINE Alu -38 274 1 549 257 114 33 chr17 46416156 46416914 -39021566 + L1ME3 LINE L1 4747 5562 -604 1619 154 111 3 chr17 46416999 46417305 -39021175 - MER7A DNA MER2_type 0 346 10 422 317 77 18 chr17 46417345 46417566 -39020914 + L1ME3 LINE L1 5726 5959 -203 1432 208 3 37 chr17 46417668 46417990 -39020490 + AluJo SINE Alu 2 312 0 2203 94 30 0 chr17 46418032 46418331 -39020149 - AluSp SINE Alu -5 308 1 2341 110 0 0 chr17 46419826 46420136 -39018344 + AluSx SINE Alu 1 310 -2 4295 169 74 9 chr17 46420154 46422135 -39016345 + L1MA4A LINE L1 3915 6052 -251 2257 111 0 3 chr17 46422135 46422432 -39016048 + AluSg SINE Alu 1 296 -14 4295 169 74 9 chr17 46422432 46422494 -39015986 + L1MA4A LINE L1 6052 6109 -194 397 123 14 0 chr17 46422507 46422580 -39015900 + L1MA4A LINE L1 6207 6280 -23 469 250 76 8 chr17 46422808 46422940 -39015540 + MIR SINE MIR 39 179 -83 1685 306 121 34 chr17 46422944 46423823 -39014657 + L3 LINE CR1 515 1469 -108 412 305 125 60 chr17 46424044 46424423 -39014057 - L2 LINE L2 -257 3056 2621 2159 94 0 0 chr17 46424423 46424699 -39013781 + AluSq SINE Alu 27 302 -11 412 305 125 60 chr17 46424699 46424818 -39013662 - L2 LINE L2 -692 2621 2511 2253 124 22 14 chr17 46425097 46425459 -39013021 + MER47A DNA MER2_type 1 365 -1 897 310 155 25 chr17 46425521 46426070 -39012410 - L2 LINE L2 -1008 2306 1687 216 273 0 0 chr17 46426161 46426205 -39012275 + L3 LINE CR1 1527 1570 -7 201 98 24 24 chr17 46427199 46427240 -39011240 + (CCCCCG)n Simple_repeat Simple_repeat 6 46 0 21 36 0 0 chr17 46427306 46427334 -39011146 + GC_rich Low_complexity Low_complexity 1 28 0 28 61 0 0 chr17 46427808 46427857 -39010623 + AT_rich Low_complexity Low_complexity 1 49 0 1909 92 89 0 chr17 46428304 46428585 -39009895 + AluSx SINE Alu 1 306 -6 207 264 108 93 chr17 46428772 46428857 -39009623 + MIR3 SINE MIR 35 124 -84 2059 121 0 0 chr17 46428857 46429162 -39009318 - AluSx SINE Alu -7 305 1 207 264 108 93 chr17 46429162 46429205 -39009275 + MIR3 SINE MIR 124 165 -43 1917 191 29 29 chr17 46430526 46430940 -39007540 + MLT2D LTR ERVL 1 414 0 261 0 0 0 chr17 46431516 46431545 -39006935 + (TG)n Simple_repeat Simple_repeat 1 29 0 1904 133 9 46 chr17 46432577 46432901 -39005579 - AluSx SINE Alu 0 312 1 1677 176 0 23 chr17 46433599 46433905 -39004575 - AluJb SINE Alu -11 301 3 286 129 32 0 chr17 46433918 46433980 -39004500 + (TA)n Simple_repeat Simple_repeat 2 65 0 2186 88 145 93 chr17 46434042 46434332 -39004148 + MER4C LTR ERV1 1 274 -191 2091 92 0 3 chr17 46434332 46434616 -39003864 + AluSg SINE Alu 2 284 -26 243 0 0 0 chr17 46434621 46434648 -39003832 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2186 88 145 93 chr17 46434648 46434663 -39003817 + MER4C LTR ERV1 277 290 -175 2128 110 0 3 chr17 46434663 46434963 -39003517 + AluSx SINE Alu 1 299 -13 2186 88 145 93 chr17 46434963 46435092 -39003388 + MER4C LTR ERV1 290 465 0 1003 90 0 39 chr17 46435421 46435595 -39002885 - AluSg/x SINE Alu 0 310 138 2162 105 3 13 chr17 46435777 46436091 -39002389 - AluSx SINE Alu -1 311 1 242 250 114 54 chr17 46436237 46436421 -39002059 + L2 LINE L2 1734 1928 -1386 262 378 65 18 chr17 46436429 46436768 -39001712 + L2 LINE L2 2358 2712 -602 2207 103 0 0 chr17 46437212 46437514 -39000966 - AluY SINE Alu -9 302 1 1493 188 39 30 chr17 46437514 46437561 -39000919 - L1MB7 LINE L1 -24 6396 6351 1621 178 0 50 chr17 46437561 46437882 -39000598 - AluJo SINE Alu -7 305 1 1493 188 39 30 chr17 46437882 46438169 -39000311 - L1MB7 LINE L1 -69 6351 6059 716 199 29 0 chr17 46438169 46438305 -39000175 - FLAM_C SINE Alu -3 140 1 5685 183 42 30 chr17 46438306 46440093 -38998387 - L1MB7 LINE L1 -357 6063 4251 193 242 61 45 chr17 46440646 46440712 -38997768 - L2 LINE L2 -52 3220 3154 301 298 13 25 chr17 46441174 46441315 -38997165 + GA-rich Low_complexity Low_complexity 1 139 0 301 246 73 0 chr17 46441826 46441941 -38996539 + MIR3 SINE MIR 93 167 -41 348 306 76 91 chr17 46442154 46442185 -38996295 - L1ME4a LINE L1 0 6121 6091 1634 138 56 0 chr17 46442185 46442454 -38996026 - AluSx SINE Alu -28 284 1 348 306 76 91 chr17 46442454 46442818 -38995662 - L1ME4a LINE L1 -30 6091 5732 656 118 36 0 chr17 46442964 46443074 -38995406 - AluSg/x SINE Alu -6 303 190 537 142 44 0 chr17 46443087 46443200 -38995280 - Zaphod DNA AcHobo -288 3743 3626 31 44 0 0 chr17 46443247 46443292 -38995188 + AT_rich Low_complexity Low_complexity 1 45 0 671 120 11 0 chr17 46443340 46443432 -38995048 + AluSg SINE Alu 2 94 -216 379 171 13 26 chr17 46443629 46443705 -38994775 - AluS SINE Alu -233 75 1 1541 231 31 39 chr17 46443811 46444323 -38994157 - L1MB7 LINE L1 -2379 4003 3496 1667 167 17 7 chr17 46444328 46444627 -38993853 + AluJo SINE Alu 7 308 -4 874 204 6 0 chr17 46444634 46444806 -38993674 + AluJo SINE Alu 1 173 -139 418 266 46 23 chr17 46444806 46444979 -38993501 - L1MB7 LINE L1 -4217 2167 1991 2046 134 0 0 chr17 46444989 46445294 -38993186 - AluSx SINE Alu -7 305 1 825 227 49 0 chr17 46445294 46445497 -38992983 - L1MB7 LINE L1 -4621 1763 1551 436 131 36 60 chr17 46445514 46445598 -38992882 - AluJb SINE Alu -22 290 209 499 196 89 18 chr17 46446795 46446907 -38991573 + MER5B DNA MER1_type 7 126 -52 184 232 46 133 chr17 46446797 46446948 -38991532 - MER5A DNA MER1_type -15 174 37 * 191 343 137 0 chr17 46447092 46447238 -38991242 + MIR SINE MIR 76 241 -21 23 0 0 0 chr17 46448280 46448303 -38990177 + GC_rich Low_complexity Low_complexity 1 23 0 189 94 0 0 chr17 46450660 46450692 -38987788 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1809 117 0 0 chr17 46450806 46451062 -38987418 + AluSq SINE Alu 38 293 -20 1200 128 13 68 chr17 46451062 46451297 -38987183 + AluJb SINE Alu 59 280 -32 180 0 0 0 chr17 46451300 46451320 -38987160 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 745 215 188 38 chr17 46452159 46452420 -38986060 + AluJo SINE Alu 2 301 -1 1868 121 7 35 chr17 46452426 46452741 -38985739 + AluSx SINE Alu 1 307 0 622 210 77 0 chr17 46452822 46452993 -38985487 + L1M4 LINE L1 3589 3775 -2371 555 257 44 62 chr17 46453360 46453578 -38984902 + MIR SINE MIR 42 262 0 258 32 0 0 chr17 46453647 46453678 -38984802 + (A)n Simple_repeat Simple_repeat 1 31 0 457 248 120 0 chr17 46453781 46453906 -38984574 - MIR SINE MIR -91 171 32 2474 40 0 0 chr17 46453911 46454207 -38984273 - AluY SINE Alu -14 297 2 188 319 43 43 chr17 46454211 46454327 -38984153 - MIR SINE MIR -65 197 82 * 275 281 0 0 chr17 46454320 46454384 -38984096 - L2 LINE L2 -2 3311 3248 781 159 0 36 chr17 46455198 46455336 -38983144 + FLAM_C SINE Alu 1 133 0 236 196 0 39 chr17 46455412 46455463 -38983017 - MIR SINE MIR -153 109 61 2112 117 3 0 chr17 46455706 46456014 -38982466 - AluSx SINE Alu -3 309 1 1577 126 0 0 chr17 46456368 46456598 -38981882 + AluSg SINE Alu 33 262 -48 1038 196 31 139 chr17 46456973 46457191 -38981289 - L1ME1 LINE L1 -5 6161 5921 1950 113 3 52 chr17 46457191 46457519 -38980961 - AluSx SINE Alu 0 312 1 1038 196 31 139 chr17 46457519 46457690 -38980790 - L1ME1 LINE L1 -245 5921 5825 1915 82 24 31 chr17 46457690 46457857 -38980623 - L1MA2 LINE L1 0 6304 6138 2215 99 3 6 chr17 46457857 46458170 -38980310 - AluSq SINE Alu -1 312 1 1915 82 24 31 chr17 46458170 46458293 -38980187 - L1MA2 LINE L1 -166 6138 6016 1038 196 31 139 chr17 46458293 46458356 -38980124 - L1ME1 LINE L1 -341 5825 5757 1269 159 78 51 chr17 46458450 46458746 -38979734 + AluJb SINE Alu 1 304 -8 185 254 51 17 chr17 46458897 46458956 -38979524 - MIR SINE MIR -174 88 28 2900 57 0 0 chr17 46459204 46459557 -38978923 - L1PA5 LINE L1 -3 6151 5799 240 35 0 0 chr17 46459667 46459696 -38978784 + (TA)n Simple_repeat Simple_repeat 1 29 0 343 255 98 29 chr17 46460005 46460107 -38978373 + L2 LINE L2 3186 3294 -19 1769 158 14 0 chr17 46460238 46460522 -38977958 - AluJb SINE Alu -17 295 8 275 312 82 0 chr17 46461415 46461585 -38976895 + L1ME LINE L1 4573 4756 -1390 231 210 32 0 chr17 46461781 46461843 -38976637 + L1ME LINE L1 5046 5109 -1037 2041 115 3 16 chr17 46461984 46462298 -38976182 + AluSp SINE Alu 1 310 -3 244 311 78 33 chr17 46462314 46462584 -38975896 + L1ME LINE L1 5338 5619 -543 697 246 222 0 chr17 46463172 46463375 -38975105 - MIR SINE MIR 0 262 15 478 335 72 32 chr17 46463698 46463919 -38974561 - MIR SINE MIR -1 261 32 1283 171 5 5 chr17 46463930 46464152 -38974328 + AluJb SINE Alu 1 222 -90 444 156 52 0 chr17 46464206 46464283 -38974197 + AluJb SINE Alu 209 289 -23 1828 146 3 26 chr17 46464647 46464955 -38973525 + AluJb SINE Alu 1 301 -11 516 210 59 29 chr17 46465855 46465995 -38972485 + MIR3 SINE MIR 35 180 -28 371 278 62 28 chr17 46466266 46466410 -38972070 + MIR3 SINE MIR 21 169 -39 1644 159 14 14 chr17 46466482 46466777 -38971703 + AluJo SINE Alu 18 312 0 2095 121 3 0 chr17 46467017 46467315 -38971165 - AluSx SINE Alu -13 299 1 470 305 99 33 chr17 46467483 46467696 -38970784 + MIR SINE MIR 6 232 -30 494 255 125 79 chr17 46467709 46468224 -38970256 - MLT1H1 LTR MaLR -2 553 1 2151 96 14 10 chr17 46468235 46468528 -38969952 - AluSg SINE Alu -16 294 1 1027 193 0 0 chr17 46468658 46468834 -38969646 + AluJb SINE Alu 121 296 -16 412 146 122 12 chr17 46468835 46468917 -38969563 + AluJo/FRAM SINE Alu 208 298 -14 603 211 62 0 chr17 46468922 46469050 -38969430 - MER3 DNA MER1_type -73 136 1 715 162 0 8 chr17 46469439 46469556 -38968924 + AluJb SINE Alu 89 204 -108 22 0 0 0 chr17 46469695 46469717 -38968763 + AT_rich Low_complexity Low_complexity 1 22 0 743 156 0 16 chr17 46469717 46469839 -38968641 - FLAM_C SINE Alu -9 124 5 1274 144 62 69 chr17 46469872 46470163 -38968317 - AluJb SINE Alu -19 293 5 1524 106 0 0 chr17 46470351 46470568 -38967912 - AluSg/x SINE Alu -11 301 85 281 211 144 0 chr17 46470583 46470673 -38967807 + HAL1 LINE L1 1800 1902 -605 3428 156 20 33 chr17 46470793 46470864 -38967616 - LTR10E LTR ERV1 0 633 563 2081 136 0 3 chr17 46470864 46471174 -38967306 + AluSc SINE Alu 1 309 0 3428 156 20 33 chr17 46471174 46471743 -38966737 - LTR10E LTR ERV1 -70 563 1 368 289 75 6 chr17 46471743 46471902 -38966578 - LTR10E-int LTR ERV1 0 6649 6480 * 3944 274 32 15 chr17 46471897 46473000 -38965480 - Harlequin LTR ERV1 -252 7533 6413 1934 211 20 14 chr17 46473002 46473480 -38965000 - Harlequin LTR ERV1 -1853 4796 2608 3658 120 37 3 chr17 46474064 46474733 -38963747 - Harlequin LTR ERV1 -4308 2588 1897 233 238 0 36 chr17 46474759 46474843 -38963637 + CT-rich Low_complexity Low_complexity 4 84 0 235 167 21 21 chr17 46476420 46476468 -38962012 - L2 LINE L2 -4 3309 3262 1192 108 18 6 chr17 46477363 46477530 -38960950 + MER4D LTR ERV1 313 481 -422 * 1476 114 30 88 chr17 46477521 46477818 -38960662 - MER4D LTR ERV1 -592 280 1 430 257 74 27 chr17 46477889 46478037 -38960443 + MIR SINE MIR 69 223 -39 2068 91 30 0 chr17 46478064 46478361 -38960119 - AluSg SINE Alu -4 306 1 1406 152 0 45 chr17 46480663 46480927 -38957553 + AluJo SINE Alu 31 282 -30 315 266 323 6 chr17 46481834 46481992 -38956488 + MIR SINE MIR 54 261 -1 1520 228 77 8 chr17 46482059 46482449 -38956031 + MLT1C LTR MaLR 7 423 -44 260 190 0 69 chr17 46482481 46482539 -38955941 - MIR SINE MIR -66 142 89 2430 139 135 98 chr17 46482670 46482899 -38955581 + Tigger3b DNA MER2_type 1 220 -2808 2400 64 3 0 chr17 46482899 46483196 -38955284 - AluY SINE Alu -13 298 1 2430 139 135 98 chr17 46483196 46483330 -38955150 + Tigger3b DNA MER2_type 220 348 -2680 2277 78 0 13 chr17 46483330 46483637 -38954843 + AluY SINE Alu 1 303 -8 2430 139 135 98 chr17 46483637 46483933 -38954547 + Tigger3b DNA MER2_type 348 685 -546 1912 127 32 90 chr17 46484033 46484311 -38954169 + Tigger3b DNA MER2_type 875 1127 -1901 1807 102 7 72 chr17 46484311 46484616 -38953864 - AluSx SINE Alu -27 285 1 1912 127 32 90 chr17 46484616 46484714 -38953766 + Tigger3b DNA MER2_type 1127 1229 -2 189 0 0 0 chr17 46485167 46485188 -38953292 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 656 208 60 0 chr17 46485258 46485426 -38953054 + MER104 DNA MER2_type 3 180 0 229 224 0 0 chr17 46485457 46485506 -38952974 + (TA)n Simple_repeat Simple_repeat 1 49 0 537 16 0 0 chr17 46485960 46486022 -38952458 + (TA)n Simple_repeat Simple_repeat 2 63 0 2042 42 0 0 chr17 46486317 46486555 -38951925 - L1P2 LINE L1 -368 5786 5549 1855 141 0 10 chr17 46486767 46487058 -38951422 - AluJo SINE Alu -24 288 1 297 317 50 17 chr17 46487636 46487756 -38950724 + MIR SINE MIR 120 243 -19 205 329 24 12 chr17 46487934 46488016 -38950464 + MIR SINE MIR 1 83 -179 1221 140 5 0 chr17 46488223 46488409 -38950071 + AluSc SINE Alu 103 289 -20 2466 226 97 51 chr17 46488462 46488567 -38949913 + Zaphod DNA AcHobo 1 100 -3931 1993 108 35 3 chr17 46488567 46488855 -38949625 + AluSx SINE Alu 1 297 -15 2466 226 97 51 chr17 46488855 46489296 -38949184 + Zaphod DNA AcHobo 100 519 -3512 3270 118 11 34 chr17 46489296 46489394 -38949086 - MER75 DNA T2_type 0 514 415 2063 119 3 3 chr17 46489394 46489706 -38948774 - AluSx SINE Alu 0 312 1 3270 118 11 34 chr17 46489706 46490132 -38948348 - MER75 DNA T2_type -99 415 2 2466 226 97 51 chr17 46490132 46490340 -38948140 + Zaphod DNA AcHobo 519 716 -3315 2376 70 0 3 chr17 46490340 46490639 -38947841 - AluY SINE Alu -13 298 1 2466 226 97 51 chr17 46490639 46490692 -38947788 + Zaphod DNA AcHobo 716 765 -3266 2052 124 7 0 chr17 46490692 46490854 -38947626 - AluSg SINE Alu -17 293 127 183 42 0 0 chr17 46490854 46490878 -38947602 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2052 124 7 0 chr17 46490878 46491005 -38947475 - AluSg SINE Alu -183 127 2 2466 226 97 51 chr17 46491005 46491134 -38947346 + Zaphod DNA AcHobo 765 983 -3048 537 142 44 0 chr17 46491145 46491258 -38947222 + Zaphod DNA AcHobo 3626 3743 -288 685 180 0 0 chr17 46491271 46491382 -38947098 + AluSg/x SINE Alu 190 300 -9 942 219 5 10 chr17 46491390 46491595 -38946885 + Zaphod DNA AcHobo 3809 4012 -19 438 218 16 32 chr17 46492256 46492380 -38946100 - MLT1K LTR MaLR -9 579 458 1910 139 3 10 chr17 46493500 46493795 -38944685 + AluSx SINE Alu 5 297 -15 833 148 0 15 chr17 46493799 46493934 -38944546 - FLAM_C SINE Alu 0 133 1 1853 242 47 25 chr17 46493945 46494536 -38943944 - L1MC4 LINE L1 -462 7580 6977 4836 160 46 12 chr17 46494536 46495605 -38942875 + L1MB7 LINE L1 5069 6175 -9 862 222 51 19 chr17 46495614 46495830 -38942650 - L1MC4 LINE L1 -1053 6989 6767 1273 153 165 4 chr17 46496081 46496336 -38942144 + AluJb SINE Alu 1 296 -16 2371 93 0 0 chr17 46496338 46496648 -38941832 + AluSg SINE Alu 1 310 0 464 214 56 0 chr17 46497126 46497215 -38941265 + Tigger3(Golem) DNA MER2_type 1 94 -2935 615 129 0 0 chr17 46497227 46497320 -38941160 - AluSg/x SINE Alu -3 306 214 185 325 50 0 chr17 46497589 46497669 -38940811 - L3b LINE CR1 -168 1415 1332 27 0 0 0 chr17 46497847 46497874 -38940606 + AT_rich Low_complexity Low_complexity 1 27 0 480 132 25 182 chr17 46498143 46498302 -38940178 - MER5A DNA MER1_type -26 163 30 487 109 18 36 chr17 46498394 46498504 -38939976 + (TTTC)n Simple_repeat Simple_repeat 1 108 0 253 319 100 50 chr17 46498504 46498629 -38939851 - L1ME LINE L1 -383 5738 5621 2328 31 0 38 chr17 46498629 46498959 -38939521 + AluY SINE Alu 1 319 0 253 319 100 50 chr17 46498959 46499152 -38939328 - L1ME LINE L1 -500 5621 5403 238 308 39 39 chr17 46499156 46499260 -38939220 - L2 LINE L2 -666 2648 2545 1406 193 86 52 chr17 46499332 46499715 -38938765 + MSTD LTR MaLR 1 396 0 1642 158 34 13 chr17 46499790 46500088 -38938392 - AluJo SINE Alu -7 305 2 213 125 75 0 chr17 46500091 46500131 -38938349 - MIR SINE MIR -112 150 108 574 266 119 28 chr17 46500530 46500748 -38937732 - MIR SINE MIR -14 248 11 2145 162 37 2 chr17 46500847 46501291 -38937189 - MER89 LTR ERV1 0 559 1 2175 101 10 0 chr17 46501375 46501682 -38936798 - AluSx SINE Alu -2 310 1 239 224 41 0 chr17 46501728 46501777 -38936703 - MIR SINE MIR -54 208 158 1758 187 55 11 chr17 46501777 46502124 -38936356 - MLT1F1 LTR MaLR 0 567 206 399 271 101 0 chr17 46502217 46502346 -38936134 - MIR SINE MIR -71 191 50 180 77 0 0 chr17 46502404 46502430 -38936050 + (TGGGGG)n Simple_repeat Simple_repeat 1 26 0 2045 102 3 7 chr17 46503344 46503629 -38934851 + AluSg SINE Alu 18 301 -9 186 274 113 0 chr17 46503689 46503751 -38934729 - L2 LINE L2 -53 3219 3151 383 283 51 43 chr17 46503753 46503891 -38934589 + MIR3 SINE MIR 21 159 -49 295 167 21 0 chr17 46503891 46503939 -38934541 - MER58A DNA MER1_type -33 74 26 222 171 0 24 chr17 46504029 46504070 -38934410 + MIR SINE MIR 114 153 -55 402 216 0 0 chr17 46504146 46504220 -38934260 + MER103 DNA DNA 47 120 -46 685 248 0 25 chr17 46504336 46504497 -38933983 + MIR SINE MIR 106 262 0 236 278 52 10 chr17 46504932 46505029 -38933451 - L2 LINE L2 -251 3021 2921 2027 106 11 0 chr17 46505052 46505357 -38933123 + AluSx SINE Alu 1 308 0 2300 160 42 102 chr17 46505649 46505980 -38932500 + L1MB5 LINE L1 5570 5849 -325 2006 106 7 3 chr17 46505980 46506285 -38932195 + AluSx SINE Alu 3 308 0 2300 160 42 102 chr17 46506285 46506593 -38931887 + L1MB5 LINE L1 5849 6174 0 320 323 52 31 chr17 46506689 46506881 -38931599 - L2 LINE L2 -896 2418 2223 388 225 145 29 chr17 46506884 46507022 -38931458 - L2 LINE L2 -1 3312 3159 321 343 18 42 chr17 46507493 46507659 -38930821 + MLT1K LTR MaLR 69 230 -358 472 246 168 72 chr17 46507735 46508122 -38930358 + MLT1H LTR MaLR 124 547 -2 405 175 10 107 chr17 46508726 46508763 -38929717 + L1ME4a LINE L1 5561 5600 -521 2002 145 0 0 chr17 46508763 46509059 -38929421 - AluSx SINE Alu -16 296 1 405 175 10 107 chr17 46509059 46509124 -38929356 + L1ME4a LINE L1 5600 5653 -468 1914 96 59 4 chr17 46509433 46509737 -38928743 + AluSq SINE Alu 1 319 0 302 185 89 68 chr17 46509801 46509832 -38928648 + L1ME4a LINE L1 5678 5707 -414 937 276 5 5 chr17 46509832 46510053 -38928427 + MER58A DNA MER1_type 4 224 0 302 185 89 68 chr17 46510053 46510167 -38928313 + L1ME4a LINE L1 5707 5826 -295 1814 132 50 4 chr17 46510167 46510287 -38928193 + AluSx SINE Alu 1 114 -198 189 0 0 0 chr17 46510287 46510308 -38928172 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1814 132 50 4 chr17 46510308 46510468 -38928012 + AluSx SINE Alu 114 294 -18 710 228 40 7 chr17 46510478 46510627 -38927853 + MER5B DNA MER1_type 1 154 -24 525 264 64 54 chr17 46510636 46510659 -38927821 + L1ME4a LINE L1 5823 5844 -277 2146 129 0 0 chr17 46510659 46510969 -38927511 + AluSq SINE Alu 1 310 -3 525 264 64 54 chr17 46510969 46511240 -38927240 + L1ME4a LINE L1 5844 6120 -1 273 239 274 0 chr17 46511435 46511552 -38926928 + MIR SINE MIR 111 259 -3 287 219 123 0 chr17 46511943 46512016 -38926464 - MIR SINE MIR -114 148 67 271 139 0 0 chr17 46512074 46512117 -38926363 - MER5B DNA MER1_type -135 43 1 293 210 0 16 chr17 46512127 46512189 -38926291 - MER5B DNA MER1_type -1 177 117 2141 114 0 0 chr17 46512191 46512489 -38925991 + AluSq SINE Alu 1 298 -15 764 204 40 12 chr17 46512507 46512704 -38925776 + L1ME3A LINE L1 5971 6170 0 1746 147 0 4 chr17 46512930 46513203 -38925277 + AluJb SINE Alu 3 274 -38 233 208 42 0 chr17 46513353 46513401 -38925079 + L1M2a LINE L1 1373 1422 -5746 1496 266 52 22 chr17 46513451 46513914 -38924566 + MLT1J LTR MaLR 35 511 0 284 319 17 34 chr17 46514531 46514650 -38923830 + MIR3 SINE MIR 81 197 -11 835 169 7 7 chr17 46514744 46514898 -38923582 - FRAM SINE Alu -22 154 1 470 163 20 31 chr17 46515056 46515154 -38923326 + L1MC5 LINE L1 7079 7175 -786 1809 148 0 3 chr17 46515157 46515440 -38923040 + AluSx SINE Alu 1 282 -30 1653 206 34 46 chr17 46515459 46515776 -38922704 + L1MC5 LINE L1 7161 7471 -490 2202 117 0 0 chr17 46515776 46516083 -38922397 + AluSq SINE Alu 1 307 -6 1653 206 34 46 chr17 46516083 46516269 -38922211 + L1MC5 LINE L1 7471 7658 -303 298 340 0 39 chr17 46516365 46516468 -38922012 + MIR SINE MIR 51 149 -59 382 254 269 21 chr17 46517243 46517436 -38921044 + MIR SINE MIR 5 245 -17 1833 113 29 4 chr17 46517452 46517727 -38920753 - AluJo SINE Alu -19 293 12 722 163 32 169 chr17 46517831 46517989 -38920491 - L1M4 LINE L1 -702 5482 5304 1745 156 3 20 chr17 46517989 46518291 -38920189 - AluJo SINE Alu -15 297 1 722 163 32 169 chr17 46518291 46518352 -38920128 - L1M4 LINE L1 -880 5304 5236 2345 74 3 0 chr17 46518352 46518662 -38919818 - AluY SINE Alu 0 311 1 1645 147 7 49 chr17 46518664 46518970 -38919510 - AluJo SINE Alu -19 293 1 722 163 32 169 chr17 46518970 46519192 -38919288 - L1M4 LINE L1 -949 5235 5073 872 141 141 6 chr17 46519200 46519370 -38919110 - MER58B DNA MER1_type -10 331 139 2444 144 38 69 chr17 46519535 46520056 -38918424 - L1MA4 LINE L1 -27 6273 5769 704 183 8 23 chr17 46520062 46520193 -38918287 - FLAM_C SINE Alu 0 133 5 2183 117 0 0 chr17 46520202 46520510 -38917970 - AluSx SINE Alu -4 308 1 1938 250 30 47 chr17 46520533 46521147 -38917333 - L1MDa LINE L1 -3170 3370 2747 2009 136 3 0 chr17 46521147 46521457 -38917023 + AluSx SINE Alu 1 311 -1 1963 144 0 0 chr17 46521459 46521758 -38916722 + AluSx SINE Alu 1 299 -13 1938 250 30 47 chr17 46521758 46521864 -38916616 - L1MDa LINE L1 -3794 2746 2659 766 179 0 0 chr17 46521902 46522019 -38916461 - FLAM_C SINE Alu -25 118 2 505 207 138 45 chr17 46522021 46522411 -38916069 - L1MDa LINE L1 -3964 2576 2223 201 175 0 0 chr17 46522411 46522451 -38916029 + (TATG)n Simple_repeat Simple_repeat 3 42 0 298 268 24 16 chr17 46522459 46522586 -38915894 + (TA)n Simple_repeat Simple_repeat 2 129 0 2180 95 0 0 chr17 46522763 46523048 -38915432 - AluSc SINE Alu -24 285 1 289 293 13 0 chr17 46523051 46523126 -38915354 + L2 LINE L2 2221 2296 -1018 854 240 61 47 chr17 46523354 46523769 -38914711 + L1MDa LINE L1 1705 2087 -4339 341 238 0 12 chr17 46523770 46523854 -38914626 + MIR SINE MIR 164 246 -16 2140 105 10 0 chr17 46523854 46524158 -38914322 + AluSx SINE Alu 1 307 -5 190 262 0 0 chr17 46524534 46524576 -38913904 - L2 LINE L2 -239 3033 2992 378 227 142 35 chr17 46525184 46525325 -38913155 - MER5B DNA MER1_type 0 178 23 313 240 230 0 chr17 46525366 46525466 -38913014 - MER5A DNA MER1_type -6 183 61 333 125 156 0 chr17 46525656 46525720 -38912760 + MER5A DNA MER1_type 2 75 -114 1071 97 7 19 chr17 46525721 46525876 -38912604 + AluSq SINE Alu 1 153 -160 589 181 69 9 chr17 46525888 46526004 -38912476 - FLAM_A SINE Alu -10 123 1 1824 116 22 4 chr17 46526013 46526290 -38912190 - AluSx SINE Alu -22 290 9 2083 123 31 0 chr17 46527130 46527423 -38911057 - AluSq SINE Alu -11 302 1 189 0 0 0 chr17 46527543 46527564 -38910916 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 2472 61 0 0 chr17 46527753 46528048 -38910432 + AluY SINE Alu 2 296 -15 244 297 52 58 chr17 46528138 46528293 -38910187 - L2 LINE L2 0 3313 3160 294 168 0 28 chr17 46529663 46529770 -38908710 + (TTAA)n Simple_repeat Simple_repeat 1 104 0 2339 78 0 0 chr17 46529770 46530053 -38908427 - AluSc SINE Alu -26 283 1 311 95 0 0 chr17 46530174 46530216 -38908264 + 5S rRNA rRNA 1 42 -79 1659 189 17 0 chr17 46530278 46530574 -38907906 - AluJo SINE Alu -1 311 11 2161 129 0 0 chr17 46530629 46530923 -38907557 - AluSg SINE Alu -16 294 1 1620 135 92 39 chr17 46531146 46531427 -38907053 - AluSx SINE Alu -16 296 1 1878 134 36 0 chr17 46531429 46531706 -38906774 - AluSx SINE Alu -25 287 1 255 308 70 6 chr17 46532540 46532696 -38905784 + MIR SINE MIR 97 262 0 1607 182 45 0 chr17 46533623 46533914 -38904566 + AluJo SINE Alu 1 304 -8 1753 94 144 0 chr17 46534190 46534446 -38904034 + AluSp SINE Alu 1 293 -10 2292 120 0 0 chr17 46534448 46534756 -38903724 + AluSg SINE Alu 1 308 -2 440 225 56 0 chr17 46535232 46535321 -38903159 + Tigger3(Golem) DNA MER2_type 1 94 -2935 * 1463 156 60 46 chr17 46535315 46535342 -38903138 + Tigger3(Golem) DNA MER2_type 2723 2748 -280 2370 115 0 3 chr17 46535342 46535655 -38902825 - AluSx SINE Alu 0 312 1 1463 156 60 46 chr17 46535655 46535929 -38902551 + Tigger3(Golem) DNA MER2_type 2748 3028 0 26 30 0 0 chr17 46536115 46536148 -38902332 + AT_rich Low_complexity Low_complexity 1 33 0 2091 120 7 0 chr17 46536281 46536585 -38901895 - AluSq SINE Alu 0 306 1 246 62 0 0 chr17 46537270 46537302 -38901178 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 792 228 66 0 chr17 46540478 46540689 -38897791 + MIR SINE MIR 13 237 -25 2479 64 0 10 chr17 46540840 46541135 -38897345 + AluY SINE Alu 1 292 -19 194 268 71 63 chr17 46541401 46541528 -38896952 - L2 LINE L2 -472 2842 2715 1938 162 3 3 chr17 46542502 46542811 -38895669 - AluJb SINE Alu -3 309 1 984 321 99 12 chr17 46542996 46543594 -38894886 - L1MC4a LINE L1 -1875 5933 5284 1224 164 37 0 chr17 46543752 46543941 -38894539 + AluSq SINE Alu 4 199 -114 2211 121 0 0 chr17 46543941 46544238 -38894242 - AluSq SINE Alu -16 297 1 278 218 165 77 chr17 46544248 46544418 -38894062 + L1ME3 LINE L1 5931 6115 -47 669 176 17 0 chr17 46544418 46544537 -38893943 + FLAM_C SINE Alu 1 121 -12 233 275 0 50 chr17 46545133 46545213 -38893267 + MIR3 SINE MIR 130 205 -3 814 261 16 5 chr17 46545395 46545583 -38892897 + MER58C DNA MER1_type 15 204 -11 22 35 0 0 chr17 46545713 46545742 -38892738 + AT_rich Low_complexity Low_complexity 1 29 0 531 250 23 0 chr17 46546747 46546875 -38891605 - MER5A DNA MER1_type -22 167 37 225 0 0 0 chr17 46547249 46547274 -38891206 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2071 97 4 4 chr17 46547274 46547553 -38890927 - AluY SINE Alu -32 279 1 1014 222 33 0 chr17 46548164 46548376 -38890104 + MER20 DNA MER1_type 1 219 0 197 263 0 35 chr17 46548818 46548875 -38889605 - MIR SINE MIR -58 150 96 1061 111 7 13 chr17 46548971 46549124 -38889356 + AluSx SINE Alu 2 153 -159 1300 100 6 0 chr17 46549250 46549420 -38889060 + AluSq SINE Alu 11 181 -132 389 192 65 62 chr17 46549546 46549691 -38888789 + MER69 DNA AcHobo 25 2526 0 594 216 10 31 chr17 46549830 46549981 -38888499 - LTR39 LTR ERV1 0 783 475 279 269 0 0 chr17 46550844 46550911 -38887569 + MIR SINE MIR 186 252 -10 535 267 0 15 chr17 46550922 46551057 -38887423 - MIR SINE MIR -67 195 63 253 295 9 29 chr17 46551386 46551491 -38886989 - MIR SINE MIR -90 118 16 2142 129 3 16 chr17 46551557 46551867 -38886613 + AluSx SINE Alu 1 306 -6 804 135 0 16 chr17 46552644 46552770 -38885710 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr17 46552790 46552811 -38885669 + AT_rich Low_complexity Low_complexity 1 21 0 755 169 0 0 chr17 46553192 46553310 -38885170 - FLAM_C SINE Alu -15 118 1 4208 185 39 22 chr17 46553750 46554805 -38883675 - L1MB7 LINE L1 -19 6663 5594 381 151 0 0 chr17 46554926 46554979 -38883501 - Alu SINE Alu -255 53 1 1565 233 29 43 chr17 46555086 46555601 -38882879 - L1MB7 LINE L1 -2380 4264 3757 1791 178 0 7 chr17 46555605 46555909 -38882571 + AluJo SINE Alu 7 308 -4 993 192 6 0 chr17 46555916 46556088 -38882392 + AluJo SINE Alu 1 173 -139 434 266 46 23 chr17 46556088 46556261 -38882219 - L1MB7 LINE L1 -4217 2429 2253 2241 129 0 0 chr17 46556271 46556582 -38881898 - AluSx SINE Alu -1 311 1 3109 193 39 64 chr17 46556582 46556802 -38881678 - L1MB7 LINE L1 -4621 2025 1801 1315 174 9 109 chr17 46556802 46556978 -38881502 - AluJb SINE Alu -22 290 159 6651 63 18 9 chr17 46556978 46557830 -38880650 - SVA Other Other -3 1383 525 1315 174 9 109 chr17 46557830 46557974 -38880506 - AluJb SINE Alu -153 159 2 3109 193 39 64 chr17 46557974 46558631 -38879849 - L1MB7 LINE L1 -4845 1801 1170 638 192 15 15 chr17 46558631 46558761 -38879719 + FLAM_C SINE Alu 2 131 -12 4853 185 41 79 chr17 46558761 46559942 -38878538 - L1MB7 LINE L1 -5369 1173 38 2466 82 3 0 chr17 46559942 46560247 -38878233 - AluY SINE Alu -5 306 1 4853 185 41 79 chr17 46560247 46560283 -38878197 - L1MB7 LINE L1 -6504 38 2 2054 143 0 13 chr17 46560318 46560626 -38877854 + 7SLRNA srpRNA srpRNA 13 316 -4 935 163 0 0 chr17 46560713 46560854 -38877626 - AluSg/x SINE Alu -39 271 131 1760 154 33 4 chr17 46560940 46561213 -38877267 + AluSx SINE Alu 1 281 -31 228 86 0 0 chr17 46561213 46561248 -38877232 + (GGGGA)n Simple_repeat Simple_repeat 2 36 0 * 254 139 56 14 chr17 46561247 46561319 -38877161 + GA-rich Low_complexity Low_complexity 2 76 0 635 190 16 0 chr17 46561403 46561524 -38876956 + MIR SINE MIR 50 172 -90 24 0 0 0 chr17 46561568 46561592 -38876888 + AT_rich Low_complexity Low_complexity 1 24 0 274 309 15 0 chr17 46561776 46561844 -38876636 - L2 LINE L2 0 3272 3204 1331 96 0 0 chr17 46561848 46562015 -38876465 + AluSg/x SINE Alu 138 304 -6 2349 93 0 16 chr17 46562261 46562571 -38875909 + AluSq SINE Alu 1 305 -8 1864 171 8 58 chr17 46563738 46564033 -38874447 - L1ME1 LINE L1 -5 6161 5853 2236 124 0 0 chr17 46564033 46564332 -38874148 - AluSx SINE Alu -13 299 1 1864 171 8 58 chr17 46564332 46564392 -38874088 - L1ME1 LINE L1 -313 5853 5825 894 217 193 27 chr17 46564392 46564687 -38873793 - MER2 DNA MER2_type 0 344 1 1864 171 8 58 chr17 46564687 46564727 -38873753 - L1ME1 LINE L1 -341 5825 5785 1303 163 0 0 chr17 46564727 46564929 -38873551 + AluSg/x SINE Alu 104 305 -7 757 193 61 56 chr17 46564929 46565142 -38873338 - L1ME1 LINE L1 -964 5182 4969 849 144 8 0 chr17 46565152 46565284 -38873196 - FLAM_C SINE Alu 0 133 1 195 69 0 0 chr17 46565295 46565324 -38873156 + (TA)n Simple_repeat Simple_repeat 2 30 0 1060 143 0 0 chr17 46565324 46565478 -38873002 + AluJb SINE Alu 132 285 -27 246 156 0 0 chr17 46565478 46565523 -38872957 + (TA)n Simple_repeat Simple_repeat 1 45 0 1160 243 85 19 chr17 46566155 46566533 -38871947 + L1MC4 LINE L1 7597 7999 -43 1907 147 3 0 chr17 46566628 46566913 -38871567 + AluJb SINE Alu 14 299 -13 661 210 201 9 chr17 46567239 46567458 -38871022 - MIR SINE MIR 0 262 2 1831 198 121 57 chr17 46567623 46567931 -38870549 - L1MC4 LINE L1 -371 7671 7384 1461 171 0 70 chr17 46567931 46568217 -38870263 + AluJb SINE Alu 2 267 -45 1831 198 121 57 chr17 46568217 46568570 -38869910 - L1MC4 LINE L1 -658 7384 6968 207 0 0 0 chr17 46569937 46569960 -38868520 + (T)n Simple_repeat Simple_repeat 1 23 0 180 255 0 0 chr17 46570006 46570057 -38868423 - MIR SINE MIR -110 152 102 1822 162 10 3 chr17 46572814 46573111 -38865369 + AluJb SINE Alu 1 299 -13 760 155 0 0 chr17 46574448 46574564 -38863916 + AluJb SINE Alu 172 287 -25 588 270 57 72 chr17 46574575 46575049 -38863431 - L1ME1 LINE L1 -1529 4617 4151 954 178 103 23 chr17 46575060 46575274 -38863206 - AluJo SINE Alu 0 312 82 1075 188 0 19 chr17 46575587 46575821 -38862659 + AluJo SINE Alu 1 268 -44 637 173 22 43 chr17 46575875 46576014 -38862466 - MER2 DNA MER2_type -209 136 1 1233 89 6 0 chr17 46576249 46576407 -38862073 - AluSp SINE Alu -10 303 145 222 221 186 12 chr17 46576425 46576511 -38861969 - MIR3 SINE MIR -14 194 94 1812 125 69 0 chr17 46576942 46577231 -38861249 + AluSx SINE Alu 1 309 -3 415 206 31 10 chr17 46577597 46577694 -38860786 + MER91A DNA MER1_type 6 104 -92 2332 233 117 12 chr17 46578898 46579499 -38858981 - MER21B LTR ERV1 -181 682 19 2155 110 63 0 chr17 46579511 46579846 -38858634 + L1PA14 LINE L1 5803 6158 -3 503 173 0 0 chr17 46579909 46579984 -38858496 - MER21B LTR ERV1 -777 86 12 266 213 0 16 chr17 46580008 46580069 -38858411 - LTR33A LTR ERVL -21 502 443 182 286 16 32 chr17 46580769 46580832 -38857648 - L2 LINE L2 -2892 422 361 2209 115 0 0 chr17 46580839 46581152 -38857328 - AluSq SINE Alu 0 313 1 1838 127 26 13 chr17 46581170 46581478 -38857002 - AluSx SINE Alu 0 312 1 833 137 8 0 chr17 46581545 46581676 -38856804 - FLAM_C SINE Alu 0 133 2 226 292 67 0 chr17 46582141 46582230 -38856250 + MLT1J LTR MaLR 377 471 -40 347 310 8 8 chr17 46582521 46582650 -38855830 - MLT1H LTR MaLR -326 223 95 1620 180 7 16 chr17 46583269 46583575 -38854905 - AluJb SINE Alu -9 303 1 315 228 89 49 chr17 46584037 46584160 -38854320 + L1MC4a LINE L1 5788 5915 -1893 344 164 0 0 chr17 46584187 46584242 -38854238 - MER3 DNA MER1_type 0 209 155 1388 172 10 67 chr17 46584244 46584367 -38854113 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr17 46584367 46584387 -38854093 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2026 115 7 0 chr17 46584390 46584676 -38853804 - AluSx SINE Alu -22 290 3 1388 172 10 67 chr17 46584676 46584862 -38853618 + AluJo SINE Alu 131 296 -16 325 172 115 46 chr17 46584863 46584950 -38853530 + FRAM SINE Alu 72 164 -2 * 529 228 59 0 chr17 46584936 46585072 -38853408 - MER3 DNA MER1_type -59 150 7 777 159 0 8 chr17 46585458 46585584 -38852896 + AluJb SINE Alu 89 213 -99 705 200 15 7 chr17 46585731 46585866 -38852614 - AluJo SINE Alu -176 136 1 201 39 0 0 chr17 46585882 46585908 -38852572 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1037 178 89 63 chr17 46585911 46586180 -38852300 - AluJb SINE Alu -32 280 5 180 0 0 0 chr17 46586323 46586343 -38852137 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 1980 144 0 0 chr17 46586369 46586668 -38851812 - AluJb SINE Alu -13 299 1 299 243 65 0 chr17 46586743 46586850 -38851630 + HAL1 LINE L1 1696 1809 -698 2188 108 3 0 chr17 46587042 46587348 -38851132 - AluSx SINE Alu -5 307 1 304 219 0 0 chr17 46587348 46587412 -38851068 + HAL1 LINE L1 2090 2153 -354 2128 116 0 19 chr17 46587650 46587968 -38850512 - AluSx SINE Alu 0 312 1 329 229 46 51 chr17 46587971 46588146 -38850334 + L1MC5 LINE L1 7591 7764 -197 323 222 0 25 chr17 46588159 46588240 -38850240 + L1MC5 LINE L1 7835 7913 -48 2367 67 3 9 chr17 46588613 46588954 -38849526 + AluSp SINE Alu 1 313 0 341 195 85 0 chr17 46588957 46589039 -38849441 - MER2 DNA MER2_type -135 210 122 2078 120 0 0 chr17 46589039 46589331 -38849149 + AluSx SINE Alu 1 292 -20 239 299 141 47 chr17 46589737 46590142 -38848338 + L2 LINE L2 1293 1735 -1579 1293 188 0 8 chr17 46590178 46590417 -38848063 - AluJo SINE Alu -15 297 61 827 305 158 27 chr17 46590466 46591237 -38847243 + L2 LINE L2 1865 2736 -578 30 0 0 0 chr17 46591290 46591320 -38847160 + AT_rich Low_complexity Low_complexity 1 30 0 1505 168 49 11 chr17 46591329 46591615 -38846865 + AluSx SINE Alu 1 297 -15 952 155 45 0 chr17 46591736 46591891 -38846589 - AluSx SINE Alu -149 163 2 670 183 11 89 chr17 46591945 46591994 -38846486 - MER3 DNA MER1_type 4 166 115 2039 125 0 0 chr17 46591994 46592289 -38846191 + AluSx SINE Alu 1 295 -17 670 183 11 89 chr17 46592289 46592419 -38846061 - MER3 DNA MER1_type -47 115 1 1986 110 34 3 chr17 46592559 46592851 -38845629 + AluSx SINE Alu 1 301 -11 1801 124 53 0 chr17 46593433 46593715 -38844765 + AluJb SINE Alu 1 297 -15 1945 123 7 3 chr17 46594369 46594654 -38843826 + AluSx SINE Alu 1 286 -26 180 0 0 0 chr17 46594654 46594674 -38843806 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1442 162 0 0 chr17 46594866 46595100 -38843380 - AluJb SINE Alu -78 234 1 586 211 81 53 chr17 46595154 46595275 -38843205 - L1ME3A LINE L1 -5 6165 6034 2079 125 0 3 chr17 46595275 46595579 -38842901 + AluSx SINE Alu 1 303 -9 586 211 81 53 chr17 46595579 46595666 -38842814 - L1ME3A LINE L1 -136 6034 5951 430 164 0 0 chr17 46595871 46595938 -38842542 + AluJ/FLAM SINE Alu 3 69 -243 511 108 0 54 chr17 46595967 46596060 -38842420 + FLAM_C SINE Alu 54 141 -2 189 308 0 0 chr17 46597940 46597992 -38840488 - L2 LINE L2 -11 3302 3251 1588 94 112 22 chr17 46597998 46598275 -38840205 + AluJb SINE Alu 1 302 -10 207 0 0 0 chr17 46598300 46598323 -38840157 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1950 113 3 20 chr17 46598381 46598693 -38839787 + AluSx SINE Alu 1 312 0 743 167 109 0 chr17 46599113 46599269 -38839211 - L1ME3A LINE L1 -414 5752 5580 350 133 229 24 chr17 46599665 46599748 -38838732 + Charlie5 DNA MER1_type 17 116 -2496 417 50 0 50 chr17 46600211 46600271 -38838209 + AluSp/q SINE Alu 158 214 -99 1568 115 17 4 chr17 46600606 46600841 -38837639 - AluSx SINE Alu -74 238 1 397 358 89 50 chr17 46601363 46601645 -38836835 - L2 LINE L2 -9 3263 2971 2486 184 55 14 chr17 46601791 46602446 -38836034 - L1M4c LINE L1 -4829 1817 1163 693 169 15 15 chr17 46602446 46602576 -38835904 + FLAM_C SINE Alu 2 131 -12 4900 189 43 64 chr17 46602576 46603736 -38834744 - L1M4c LINE L1 -5369 1173 37 2304 72 3 7 chr17 46603736 46604041 -38834439 - AluY SINE Alu -7 304 1 4900 189 43 64 chr17 46604041 46604077 -38834403 - L1M4c LINE L1 -6505 37 2 1813 156 0 13 chr17 46604112 46604414 -38834066 + 7SLRNA srpRNA srpRNA 13 310 -10 923 149 0 0 chr17 46604501 46604642 -38833838 - AluSg/x SINE Alu -39 273 133 1592 169 35 3 chr17 46604728 46605018 -38833462 + AluSx SINE Alu 1 299 -13 530 200 183 72 chr17 46605341 46605407 -38833073 - AluJo SINE Alu -111 201 144 2202 78 34 0 chr17 46605407 46605701 -38832779 - AluSp SINE Alu -9 304 1 530 200 183 72 chr17 46605701 46605814 -38832666 - AluJo SINE Alu -168 144 2 324 320 148 4 chr17 46605871 46606050 -38832430 + L1ME3A LINE L1 5696 5903 -267 2131 114 10 0 chr17 46608982 46609289 -38829191 - AluSx SINE Alu -2 310 1 181 371 149 12 chr17 46609466 46609714 -38828766 - L2 LINE L2 -1 3271 2990 951 250 121 17 chr17 46609984 46610456 -38828024 - L1MC5 LINE L1 -47 7914 7394 2025 134 0 7 chr17 46610499 46610804 -38827676 + AluSx SINE Alu 1 303 -9 2023 114 3 7 chr17 46611578 46611876 -38826604 - AluSq SINE Alu -16 297 1 22 0 0 0 chr17 46612109 46612131 -38826349 + AT_rich Low_complexity Low_complexity 1 22 0 298 309 15 0 chr17 46612315 46612383 -38826097 - L2 LINE L2 0 3272 3204 1212 82 0 0 chr17 46612387 46612545 -38825935 + AluSg/x SINE Alu 140 297 -15 194 310 86 0 chr17 46612549 46612607 -38825873 - L2 LINE L2 -93 3179 3117 2108 103 0 17 chr17 46612795 46613096 -38825384 + AluSq SINE Alu 7 302 -11 1136 247 85 19 chr17 46613303 46613679 -38824801 + L1MC4 LINE L1 7599 7999 -43 1783 147 3 0 chr17 46613774 46614059 -38824421 + AluJb SINE Alu 14 299 -13 623 215 201 9 chr17 46614385 46614604 -38823876 - MIR SINE MIR 0 262 2 1019 214 162 7 chr17 46614769 46615077 -38823403 - L1MC4 LINE L1 -371 7671 7316 1383 173 0 63 chr17 46615077 46615361 -38823119 + AluJb SINE Alu 2 267 -45 913 211 107 33 chr17 46615371 46615708 -38822772 - L1MC4 LINE L1 -713 7329 6968 188 274 0 0 chr17 46617142 46617193 -38821287 - MIR SINE MIR -110 152 102 1766 158 10 3 chr17 46619937 46620234 -38818246 + AluJb SINE Alu 1 299 -13 180 97 0 0 chr17 46620294 46620325 -38818155 + (T)n Simple_repeat Simple_repeat 1 31 0 231 338 84 36 chr17 46621308 46621533 -38816947 + L2 LINE L2 2826 3061 -211 789 147 0 0 chr17 46621593 46621709 -38816771 + AluJb SINE Alu 172 287 -25 1647 135 69 0 chr17 46622188 46622476 -38816004 + AluSx SINE Alu 1 308 -4 208 275 25 16 chr17 46622494 46622570 -38815910 - MIR SINE MIR -64 144 82 441 216 31 10 chr17 46622838 46622935 -38815545 + MER91A DNA MER1_type 6 104 -92 296 313 70 82 chr17 46624783 46624892 -38813588 - MIR SINE MIR -8 254 145 1904 89 0 4 chr17 46624892 46625151 -38813329 + AluY SINE Alu 36 293 -18 296 313 70 82 chr17 46625151 46625297 -38813183 - MIR SINE MIR -117 145 2 227 186 0 47 chr17 46625396 46625439 -38813041 - AluJb SINE Alu -135 167 127 4627 125 192 91 chr17 46625458 46626886 -38811594 - pTR5 LTR ERV1 0 2438 736 1722 234 61 11 chr17 46627665 46628260 -38810220 - MER21B LTR ERV1 -186 677 22 2141 113 67 0 chr17 46628275 46628603 -38809877 + L1PA14 LINE L1 5803 6152 -9 505 190 0 0 chr17 46628680 46628759 -38809721 - MER21B LTR ERV1 -773 90 12 315 200 0 0 chr17 46628783 46628843 -38809637 - LTR33A LTR ERVL -21 502 443 227 364 0 0 chr17 46629535 46629612 -38808868 - L2 LINE L2 -2885 429 353 2189 115 0 26 chr17 46629620 46629932 -38808548 - AluSq SINE Alu -9 304 1 1568 106 128 33 chr17 46629935 46630208 -38808272 - AluSx SINE Alu -8 304 6 706 132 83 0 chr17 46630364 46630485 -38807995 - AluJb SINE Alu -179 133 3 286 244 89 49 chr17 46630701 46630824 -38807656 + L1MC4a LINE L1 5788 5915 -1893 318 182 0 0 chr17 46630851 46630906 -38807574 - MER3 DNA MER1_type 0 209 155 802 150 0 0 chr17 46630912 46631032 -38807448 + AluJo/FLAM SINE Alu 5 124 -188 2081 123 10 7 chr17 46631032 46631333 -38807147 - AluSx SINE Alu -2 310 9 4878 172 61 143 chr17 46631434 46632095 -38806385 + L1M4 LINE L1 3787 4501 -1645 2126 129 7 0 chr17 46632095 46632390 -38806090 + AluSx SINE Alu 1 297 -15 4878 172 61 143 chr17 46632390 46632488 -38805992 + L1M4 LINE L1 4501 4605 -1541 1841 179 13 16 chr17 46632488 46632796 -38805684 + AluJo SINE Alu 1 307 -5 4878 172 61 143 chr17 46632796 46633133 -38805347 + L1M4 LINE L1 4605 4968 -1178 853 144 0 0 chr17 46633133 46633258 -38805222 + FLAM_C SINE Alu 1 125 -18 4878 172 61 143 chr17 46633258 46633690 -38804790 + L1M4 LINE L1 4968 5291 -855 1087 166 90 90 chr17 46633690 46633919 -38804561 + AluJo SINE Alu 1 232 -70 2391 101 0 0 chr17 46633919 46634226 -38804254 + AluSg1 SINE Alu 1 307 -2 1087 166 90 90 chr17 46634226 46634286 -38804194 + AluJo SINE Alu 231 290 -12 4878 172 61 143 chr17 46634286 46634388 -38804092 + L1M4 LINE L1 5291 5400 -746 1773 182 7 10 chr17 46634392 46634522 -38803958 + AluJb SINE Alu 5 134 -178 1858 126 44 0 chr17 46634522 46634817 -38803663 + AluSx SINE Alu 1 307 0 1773 182 7 10 chr17 46634817 46634992 -38803488 + AluJb SINE Alu 134 310 -2 465 91 0 34 chr17 46634992 46635080 -38803400 + (GGGA)n Simple_repeat Simple_repeat 1 85 0 1486 158 33 36 chr17 46635087 46635390 -38803090 + L1M4 LINE L1 5400 5701 -473 824 165 0 0 chr17 46635391 46635524 -38802956 + FLAM_C SINE Alu 1 133 0 1981 166 0 3 chr17 46635535 46635843 -38802637 + AluJb SINE Alu 1 307 -5 1771 155 7 29 chr17 46635930 46636239 -38802241 - AluJo SINE Alu -10 302 1 2054 130 7 0 chr17 46636408 46636701 -38801779 + AluSx SINE Alu 1 295 -17 1869 121 26 59 chr17 46636721 46637027 -38801453 + AluSq SINE Alu 1 296 -17 2237 110 7 0 chr17 46637326 46637627 -38800853 - AluSx SINE Alu -9 303 1 2455 54 0 20 chr17 46638077 46638375 -38800105 - AluY SINE Alu -19 292 1 2377 80 0 16 chr17 46638639 46638951 -38799529 + AluSx SINE Alu 1 307 -5 1935 134 13 29 chr17 46639118 46639432 -38799048 + AluJb SINE Alu 1 309 -3 262 220 68 0 chr17 46639436 46639495 -38798985 + MLT1A2 LTR MaLR 34 96 -294 36 0 0 0 chr17 46639568 46639604 -38798876 + GC_rich Low_complexity Low_complexity 1 36 0 209 174 43 0 chr17 46640062 46640108 -38798372 + (TCTCTG)n Simple_repeat Simple_repeat 1 48 0 279 0 0 0 chr17 46640359 46640390 -38798090 + (CA)n Simple_repeat Simple_repeat 2 32 0 336 203 0 14 chr17 46640395 46640469 -38798011 - L1M4 LINE L1 -2116 4030 3958 2266 121 0 6 chr17 46640520 46640833 -38797647 + AluSq SINE Alu 1 311 -2 2075 130 0 23 chr17 46640848 46640987 -38797493 + AluSx SINE Alu 1 142 -170 1865 157 10 0 chr17 46640987 46641286 -38797194 + AluSx SINE Alu 3 304 -8 2075 130 0 23 chr17 46641286 46641454 -38797026 + AluSx SINE Alu 142 301 -11 1039 236 48 41 chr17 46641454 46641616 -38796864 + MLT1A2 LTR MaLR 80 239 -135 2749 161 2 58 chr17 46641616 46641789 -38796691 + MER66B LTR ERV1 1 182 -304 2105 138 0 6 chr17 46641789 46642100 -38796380 - AluSg SINE Alu -1 309 1 2749 161 2 58 chr17 46642100 46642336 -38796144 + MER66B LTR ERV1 182 378 -108 1727 166 38 7 chr17 46642336 46642626 -38795854 + AluSx SINE Alu 1 299 -13 2749 161 2 58 chr17 46642626 46642730 -38795750 + MER66B LTR ERV1 378 486 0 1039 236 48 41 chr17 46642730 46642860 -38795620 + MLT1A2 LTR MaLR 239 374 0 230 200 15 46 chr17 46642864 46642929 -38795551 + Charlie8 DNA MER1_type 1355 1417 -1000 2179 103 0 32 chr17 46643005 46643315 -38795165 + AluSx SINE Alu 6 305 -7 598 198 8 16 chr17 46643322 46643443 -38795037 + FLAM_C SINE Alu 7 126 -17 2531 73 0 0 chr17 46644066 46644368 -38794112 - AluY SINE Alu -9 302 1 2266 78 0 4 chr17 46644376 46644708 -38793772 - AluY SINE Alu 0 331 1 744 213 64 50 chr17 46644709 46644911 -38793569 - MER46C DNA MER2_type -126 212 8 273 253 11 11 chr17 46644971 46645058 -38793422 + MER5A DNA MER1_type 79 165 -24 586 187 86 20 chr17 46645787 46646029 -38792451 - MLT1D LTR MaLR -75 430 133 3838 61 2 4 chr17 46646049 46646526 -38791954 - LTR17 LTR ERV1 -49 731 256 945 135 0 0 chr17 46646527 46646660 -38791820 - AluSq/x SINE Alu -179 133 1 249 196 0 0 chr17 46646760 46646816 -38791664 + (TA)n Simple_repeat Simple_repeat 1 56 0 245 171 0 0 chr17 46646817 46646852 -38791628 - Alu SINE Alu -267 35 1 2555 199 96 67 chr17 46646886 46647094 -38791386 - L1MC4 LINE L1 -2 8040 7840 2439 100 0 0 chr17 46647094 46647403 -38791077 - AluSg SINE Alu -1 309 1 2555 199 96 67 chr17 46647403 46647922 -38790558 - L1MC4 LINE L1 -202 7840 7282 2419 77 3 3 chr17 46647922 46648220 -38790260 - AluSp SINE Alu -15 298 1 2555 199 96 67 chr17 46648220 46648342 -38790138 - L1MC4 LINE L1 -760 7282 7165 628 165 0 0 chr17 46648347 46648450 -38790030 - AluSg/x SINE Alu -11 301 199 1959 130 16 25 chr17 46648586 46648901 -38789579 + AluSx SINE Alu 1 312 0 705 268 24 14 chr17 46648970 46649179 -38789301 - L1MC/D LINE L1 -2000 5808 5598 1681 195 20 3 chr17 46649201 46649504 -38788976 - AluSx SINE Alu -4 308 1 1843 39 201 27 chr17 46649708 46649967 -38788513 - AluY SINE Alu -7 304 1 2288 110 13 0 chr17 46650579 46650887 -38787593 - AluSx SINE Alu 0 312 1 2163 111 3 7 chr17 46650974 46651271 -38787209 + AluSx SINE Alu 1 296 -16 1205 153 0 0 chr17 46651293 46651470 -38787010 + AluSg/x SINE Alu 120 296 -14 1517 151 73 31 chr17 46651575 46651686 -38786794 + AluJb SINE Alu 1 106 -206 2417 97 0 0 chr17 46651686 46651996 -38786484 + AluSg SINE Alu 1 310 0 1517 151 73 31 chr17 46651996 46652143 -38786337 + AluJb SINE Alu 106 270 -42 1758 160 6 45 chr17 46652422 46652734 -38785746 + AluJo SINE Alu 1 300 -12 1526 99 5 0 chr17 46652925 46653126 -38785354 - AluSg1 SINE Alu -77 232 31 1304 167 0 70 chr17 46653126 46653383 -38785097 - AluJb SINE Alu -44 268 30 1255 210 176 41 chr17 46653525 46653939 -38784541 + MER31A LTR ERV1 1 470 -15 2028 97 24 88 chr17 46653941 46654281 -38784199 - AluYb8 SINE Alu 0 318 1 1738 183 3 10 chr17 46654290 46654591 -38783889 - AluJb SINE Alu -13 299 1 2496 84 0 3 chr17 46654620 46654930 -38783550 - AluSc SINE Alu 0 309 1 648 183 51 15 chr17 46654932 46655069 -38783411 - FLAM_C SINE Alu 0 143 2 1720 156 4 4 chr17 46655110 46655380 -38783100 + AluJb SINE Alu 43 312 0 2299 74 24 7 chr17 46655655 46655953 -38782527 + AluY SINE Alu 1 303 -8 2471 82 7 0 chr17 46655963 46656269 -38782211 + AluSp SINE Alu 1 308 -5 1639 165 17 21 chr17 46656277 46656568 -38781912 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr17 46657390 46657412 -38781068 + AT_rich Low_complexity Low_complexity 1 22 0 569 76 13 0 chr17 46658136 46658215 -38780265 - MADE1 DNA Mariner 0 80 1 22 56 0 0 chr17 46658733 46658769 -38779711 + AT_rich Low_complexity Low_complexity 1 36 0 204 97 0 0 chr17 46661057 46661088 -38777392 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 1489 180 38 19 chr17 46661092 46661359 -38777121 - AluJo SINE Alu -39 273 2 2228 108 7 0 chr17 46661369 46661665 -38776815 - AluSq SINE Alu -15 298 1 2068 125 24 0 chr17 46662306 46662594 -38775886 - AluSx SINE Alu -17 295 1 22 0 0 0 chr17 46662604 46662626 -38775854 + AT_rich Low_complexity Low_complexity 1 22 0 2147 136 0 3 chr17 46663030 46663339 -38775141 - AluSx SINE Alu -4 308 1 288 0 0 0 chr17 46663806 46663838 -38774642 + (CA)n Simple_repeat Simple_repeat 2 33 0 270 0 0 0 chr17 46663884 46663914 -38774566 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 2315 99 0 0 chr17 46663917 46664211 -38774269 - AluSx SINE Alu -18 294 1 1590 158 58 32 chr17 46664219 46664530 -38773950 - Charlie1b DNA MER1_type -198 325 7 2038 111 13 20 chr17 46664549 46664847 -38773633 - AluSx SINE Alu -16 296 1 2200 129 3 0 chr17 46664863 46665173 -38773307 - AluSx SINE Alu -1 311 1 2137 102 39 0 chr17 46665185 46665469 -38773011 - AluSg SINE Alu -15 295 1 306 104 42 0 chr17 46665847 46665895 -38772585 - MER4E LTR ERV1 -62 717 668 256 204 0 37 chr17 46666002 46666056 -38772424 + MER57A LTR ERV1 285 336 -67 243 255 0 0 chr17 46666089 46666140 -38772340 + MER57A LTR ERV1 295 345 -58 2091 131 0 0 chr17 46666430 46666721 -38771759 - AluSx SINE Alu -21 291 1 659 194 187 0 chr17 46666750 46666905 -38771575 + AluJo SINE Alu 123 306 -6 2251 100 7 0 chr17 46667038 46667328 -38771152 - AluSq SINE Alu -21 292 1 1692 160 4 14 chr17 46667331 46667612 -38770868 - AluJb SINE Alu -13 299 22 2152 126 10 0 chr17 46667656 46667958 -38770522 - AluSq SINE Alu -8 305 1 260 400 14 43 chr17 46668217 46668357 -38770123 + L2 LINE L2 3116 3251 -21 2298 80 6 19 chr17 46668384 46668698 -38769782 - AluSx SINE Alu -2 310 1 236 281 31 0 chr17 46669347 46669411 -38769069 - MIR3 SINE MIR -49 159 94 2373 85 3 0 chr17 46669707 46670013 -38768467 + AluY SINE Alu 1 307 -4 23 54 0 0 chr17 46670095 46670132 -38768348 + AT_rich Low_complexity Low_complexity 1 37 0 2445 74 0 7 chr17 46670220 46670519 -38767961 + AluSq SINE Alu 1 297 -16 1816 165 0 13 chr17 46671295 46671598 -38766882 - AluJo SINE Alu -13 299 1 23 33 0 0 chr17 46672172 46672202 -38766278 + AT_rich Low_complexity Low_complexity 1 30 0 940 187 0 0 chr17 46672202 46672357 -38766123 - FRAM SINE Alu -11 155 1 1369 137 0 20 chr17 46672369 46672614 -38765866 - AluJb SINE Alu 0 328 88 641 219 6 0 chr17 46672616 46672776 -38765704 + (TA)n Simple_repeat Simple_repeat 2 162 0 2269 81 7 3 chr17 46672776 46673060 -38765420 - AluSp SINE Alu -23 290 6 2392 69 7 20 chr17 46673066 46673371 -38765109 - AluSp SINE Alu -12 301 1 2076 127 7 13 chr17 46673379 46673678 -38764802 - AluSx SINE Alu -15 297 1 837 161 15 0 chr17 46673693 46673823 -38764657 - AluJo SINE Alu -178 134 3 198 0 0 0 chr17 46673865 46673887 -38764593 + (CAAAT)n Simple_repeat Simple_repeat 3 24 0 1638 163 0 75 chr17 46673934 46674103 -38764377 - AluJo SINE Alu -14 298 118 273 29 0 0 chr17 46674103 46674137 -38764343 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2039 98 61 0 chr17 46674137 46674401 -38764079 - AluSc SINE Alu -29 280 1 1638 163 0 75 chr17 46674401 46674549 -38763931 - AluJo SINE Alu -192 120 4 513 237 136 30 chr17 46674563 46674732 -38763748 - MIR SINE MIR -2 260 74 21 0 0 0 chr17 46674803 46674824 -38763656 + AT_rich Low_complexity Low_complexity 1 21 0 387 0 0 0 chr17 46675035 46675078 -38763402 + (ATG)n Simple_repeat Simple_repeat 1 43 0 2371 90 7 7 chr17 46675488 46675798 -38762682 + AluY SINE Alu 1 310 -1 586 194 13 2 chr17 46677114 46677280 -38761200 - MER82 DNA MER2_type -3 650 444 267 299 103 35 chr17 46677312 46677424 -38761056 + MIR SINE MIR 3 133 -129 1813 175 3 3 chr17 46677424 46677727 -38760753 - AluJb SINE Alu -8 304 2 267 299 103 35 chr17 46677727 46677788 -38760692 + MIR SINE MIR 133 188 -74 316 290 86 0 chr17 46677818 46677911 -38760569 - MER82 DNA MER2_type -552 101 1 33 0 0 0 chr17 46678036 46678069 -38760411 + AT_rich Low_complexity Low_complexity 1 33 0 2565 60 0 3 chr17 46678894 46679194 -38759286 - AluY SINE Alu -12 299 1 1469 156 0 4 chr17 46679816 46680041 -38758439 - AluJb SINE Alu -88 224 1 512 284 128 28 chr17 46680539 46680789 -38757691 + L2 LINE L2 3038 3312 -1 1698 97 13 21 chr17 46682366 46682603 -38755877 - AluSp SINE Alu -78 235 1 1583 193 32 3 chr17 46682603 46682888 -38755592 - AluJo SINE Alu -16 296 4 960 250 62 44 chr17 46682935 46683275 -38755205 - L1MD2 LINE L1 -87 6272 5927 36 23 0 0 chr17 46683297 46683340 -38755140 + AT_rich Low_complexity Low_complexity 1 43 0 24 32 0 0 chr17 46683684 46683715 -38754765 + AT_rich Low_complexity Low_complexity 1 31 0 701 114 19 0 chr17 46683787 46683892 -38754588 + MLT2A2 LTR ERVL 298 404 -49 198 0 0 0 chr17 46684499 46684521 -38753959 + (CA)n Simple_repeat Simple_repeat 1 22 0 372 241 43 9 chr17 46684699 46684815 -38753665 + L1MEc LINE L1 35 154 -6242 686 292 5 10 chr17 46684828 46685037 -38753443 + L1MEc LINE L1 230 437 -5959 955 257 96 106 chr17 46685051 46685248 -38753232 + MER21B LTR ERV1 1 198 -665 2015 111 24 3 chr17 46685248 46685537 -38752943 + AluSq SINE Alu 1 295 -18 955 257 96 106 chr17 46685537 46686059 -38752421 + MER21B LTR ERV1 198 713 -150 3321 256 64 48 chr17 46686070 46686410 -38752070 + L1MEc LINE L1 447 780 -5616 1686 177 13 13 chr17 46686410 46686709 -38751771 + AluJo SINE Alu 1 299 -13 3321 256 64 48 chr17 46686709 46686746 -38751734 + L1MEc LINE L1 780 815 -5581 2458 25 3 0 chr17 46686746 46687069 -38751411 + AluY SINE Alu 1 324 0 3321 256 64 48 chr17 46687069 46687218 -38751262 + L1MEc LINE L1 815 960 -5436 1559 143 15 94 chr17 46687218 46687546 -38750934 + AluJo SINE Alu 1 302 -10 2353 84 7 7 chr17 46687546 46687854 -38750626 + AluSg SINE Alu 1 308 -2 3321 256 64 48 chr17 46687854 46688425 -38750055 + L1MEc LINE L1 960 1520 -4876 2200 133 7 0 chr17 46688425 46688734 -38749746 + AluSx SINE Alu 1 311 -1 3321 256 64 48 chr17 46688734 46688856 -38749624 + L1MEc LINE L1 1520 1639 -4757 2401 92 0 7 chr17 46688856 46689162 -38749318 + AluSc SINE Alu 1 304 -5 3321 256 64 48 chr17 46689162 46689300 -38749180 + L1MEc LINE L1 1639 1773 -4623 2246 123 0 0 chr17 46689300 46689608 -38748872 + AluSx SINE Alu 1 308 -4 3321 256 64 48 chr17 46689608 46689882 -38748598 + L1MEc LINE L1 1773 2111 -4285 1588 218 70 7 chr17 46689882 46690313 -38748167 + MLT1C LTR MaLR 10 467 0 2331 96 3 0 chr17 46690378 46690671 -38747809 + AluSp SINE Alu 1 294 -19 1899 162 0 20 chr17 46693436 46693733 -38744747 + AluJb SINE Alu 9 299 -13 23 97 0 0 chr17 46693968 46694040 -38744440 + AT_rich Low_complexity Low_complexity 1 72 0 2039 149 0 0 chr17 46694884 46695173 -38743307 - AluSx SINE Alu -23 289 1 25 31 0 0 chr17 46695259 46695291 -38743189 + AT_rich Low_complexity Low_complexity 1 32 0 1941 140 14 10 chr17 46695299 46695591 -38742889 + AluJo SINE Alu 1 293 -19 2248 82 0 7 chr17 46695774 46696065 -38742415 - AluSc SINE Alu -20 289 1 2295 87 0 0 chr17 46696085 46696374 -38742106 - AluSx SINE Alu -22 290 2 1801 181 3 3 chr17 46698248 46698547 -38739933 - AluJb SINE Alu -13 299 1 857 152 8 0 chr17 46698547 46698679 -38739801 - AluJb SINE Alu -179 133 1 2129 121 20 0 chr17 46699855 46700153 -38738327 - AluSx SINE Alu -8 304 1 741 171 47 16 chr17 46700686 46700815 -38737665 - FLAM_A SINE Alu 0 133 1 21 0 0 0 chr17 46700815 46700836 -38737644 + AT_rich Low_complexity Low_complexity 1 21 0 248 98 49 0 chr17 46700841 46700882 -38737598 - Alu SINE Alu -21 112 70 2207 122 3 0 chr17 46701096 46701399 -38737081 + AluSx SINE Alu 1 304 -8 219 362 69 44 chr17 46701647 46701965 -38736515 + L2 LINE L2 2329 2654 -660 22 0 0 0 chr17 46702167 46702189 -38736291 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr17 46702345 46702375 -38736105 + AT_rich Low_complexity Low_complexity 1 30 0 873 149 0 0 chr17 46703046 46703180 -38735300 + AluJo SINE Alu 1 134 -178 1778 145 47 39 chr17 46703329 46703388 -38735092 + MER7A DNA MER2_type 8 65 -2973 2172 122 3 0 chr17 46703388 46703691 -38734789 - AluSq SINE Alu -9 304 1 1778 145 47 39 chr17 46703691 46703969 -38734511 + MER7A DNA MER2_type 65 346 0 1451 218 147 53 chr17 46704001 46704163 -38734317 - L1MD2 LINE L1 -10 6349 6204 2025 130 0 7 chr17 46704163 46704468 -38734012 + AluSx SINE Alu 2 304 0 1451 218 147 53 chr17 46704468 46704909 -38733571 - L1MD2 LINE L1 -155 6204 5688 1746 208 69 10 chr17 46704912 46705586 -38732894 - L1MD2 LINE L1 -683 5559 4844 430 202 0 0 chr17 46705587 46705676 -38732804 - L1M3 LINE L1 -508 5675 5587 1425 228 55 51 chr17 46705684 46706493 -38731987 - L1M3 LINE L1 -2368 3778 2893 2155 125 0 0 chr17 46706493 46706780 -38731700 - AluSx SINE Alu -23 289 3 1425 228 55 51 chr17 46706780 46706836 -38731644 - L1M3 LINE L1 -3253 2893 2839 3308 158 119 58 chr17 46707266 46708061 -38730419 - MER21B LTR ERV1 -19 844 1 2052 145 6 3 chr17 46708607 46708918 -38729562 - AluJo SINE Alu 0 312 1 2354 100 7 3 chr17 46708991 46709301 -38729179 + AluSq SINE Alu 1 311 -2 277 279 0 15 chr17 46709773 46709841 -38728639 + CT-rich Low_complexity Low_complexity 2 68 0 1594 180 60 4 chr17 46709844 46710111 -38728369 - AluJo SINE Alu -30 282 1 22 0 0 0 chr17 46710124 46710146 -38728334 + AT_rich Low_complexity Low_complexity 1 22 0 1736 187 10 0 chr17 46710447 46710747 -38727733 + AluJo SINE Alu 2 304 -8 25 51 0 0 chr17 46712181 46712220 -38726260 + AT_rich Low_complexity Low_complexity 1 39 0 976 209 16 5 chr17 46712549 46712736 -38725744 + MER5A DNA MER1_type 1 189 0 2166 114 0 3 chr17 46713438 46713735 -38724745 + AluSx SINE Alu 1 296 -16 233 333 42 8 chr17 46713919 46714039 -38724441 + MER117 DNA MER1_type 2 125 -72 2049 78 12 0 chr17 46714321 46714579 -38723901 + AluSq SINE Alu 21 281 -32 246 32 0 0 chr17 46714596 46714627 -38723853 + (CAGGA)n Simple_repeat Simple_repeat 5 35 0 551 147 10 0 chr17 46714627 46714729 -38723751 + GA-rich Low_complexity Low_complexity 3 105 0 2140 145 0 0 chr17 46715161 46715465 -38723015 + AluSx SINE Alu 1 304 -8 1004 228 43 13 chr17 46715501 46715733 -38722747 + MIR SINE MIR 3 241 -21 235 384 53 0 chr17 46716165 46716298 -38722182 - L2 LINE L2 -445 2869 2730 212 260 0 0 chr17 46716371 46716421 -38722059 - L2 LINE L2 -955 2359 2310 544 167 130 0 chr17 46716783 46716891 -38721589 + FLAM_A SINE Alu 4 125 -8 1825 155 31 0 chr17 46716922 46717212 -38721268 + AluSx SINE Alu 1 299 -13 207 0 0 0 chr17 46717485 46717508 -38720972 + (CA)n Simple_repeat Simple_repeat 2 24 0 297 265 44 44 chr17 46717735 46717871 -38720609 - MER112 DNA MER1_type -10 250 115 1597 169 38 42 chr17 46717880 46718193 -38720287 + AluJb SINE Alu 1 312 0 397 282 77 75 chr17 46718246 46718420 -38720060 - MIR SINE MIR -21 241 60 1919 104 11 4 chr17 46718420 46718690 -38719790 - AluSp SINE Alu -2 311 40 376 284 135 0 chr17 46718922 46719063 -38719417 + MER117 DNA MER1_type 9 168 -29 404 268 72 14 chr17 46719122 46719260 -38719220 + MIR SINE MIR 117 262 0 232 255 0 20 chr17 46719365 46719416 -38719064 - L2 LINE L2 -12 3260 3211 1012 194 0 6 chr17 46719588 46719763 -38718717 + AluJo SINE Alu 117 290 -22 403 299 99 41 chr17 46720331 46720552 -38717928 - MIR SINE MIR -14 248 15 216 0 0 0 chr17 46720573 46720597 -38717883 + (A)n Simple_repeat Simple_repeat 1 24 0 2025 148 0 10 chr17 46720602 46720912 -38717568 + AluJb SINE Alu 6 312 0 286 336 79 51 chr17 46721457 46721710 -38716770 + L2 LINE L2 2897 3156 -116 544 247 35 57 chr17 46722186 46722413 -38716067 - L1ME3A LINE L1 -219 5951 5730 599 192 152 13 chr17 46722513 46722664 -38715816 + FAM SINE Alu 1 42 -7 318 275 0 0 chr17 46722677 46722757 -38715723 - L1ME3A LINE L1 -519 5651 5572 28 0 0 0 chr17 46723022 46723050 -38715430 + AT_rich Low_complexity Low_complexity 1 28 0 364 322 99 8 chr17 46723322 46723443 -38715037 + L2 LINE L2 3139 3270 -2 391 296 76 49 chr17 46723692 46723916 -38714564 + MIR SINE MIR 6 241 -21 30 0 0 0 chr17 46724731 46724761 -38713719 + AT_rich Low_complexity Low_complexity 1 30 0 2398 59 0 16 chr17 46724807 46725110 -38713370 - AluY SINE Alu -13 298 1 581 161 0 0 chr17 46725240 46725327 -38713153 - AluJ/FLAM SINE Alu -223 89 3 802 146 122 94 chr17 46725477 46725690 -38712790 + MER20 DNA MER1_type 1 219 0 2137 99 0 3 chr17 46726919 46727229 -38711251 - AluSx SINE Alu 0 309 1 25 0 0 0 chr17 46727435 46727460 -38711020 + AT_rich Low_complexity Low_complexity 1 25 0 287 325 57 16 chr17 46729807 46729930 -38708550 + MIR SINE MIR 20 147 -115 575 158 86 43 chr17 46730385 46730524 -38707956 - MER3 DNA MER1_type -25 184 40 535 247 153 34 chr17 46730538 46730915 -38707565 - MLT1H LTR MaLR -171 384 2 892 239 81 56 chr17 46730975 46731103 -38707377 - L3 LINE CR1 -467 1110 987 2221 102 0 3 chr17 46731103 46731396 -38707084 - AluSg SINE Alu -18 292 1 892 239 81 56 chr17 46731396 46731551 -38706929 - L3 LINE CR1 -590 987 820 2231 88 3 0 chr17 46731700 46731995 -38706485 + AluSp SINE Alu 1 296 -17 2213 82 0 3 chr17 46731995 46732289 -38706191 + AluY SINE Alu 1 293 -18 316 258 93 159 chr17 46732820 46732896 -38705584 + L2 LINE L2 1989 2068 -1246 180 0 0 0 chr17 46732896 46732916 -38705564 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2041 109 0 0 chr17 46732919 46733195 -38705285 - AluSx SINE Alu -36 276 1 316 258 93 159 chr17 46733195 46733376 -38705104 + L2 LINE L2 2070 2206 -1108 2115 113 20 0 chr17 46733376 46733677 -38704803 - AluSx SINE Alu -5 307 1 316 258 93 159 chr17 46733677 46733898 -38704582 + L2 LINE L2 2206 2440 -874 1251 156 45 12 chr17 46733905 46734149 -38704331 - MER34 LTR ERV1 -281 261 10 652 309 116 40 chr17 46734325 46734392 -38704088 + L2 LINE L2 2823 2883 -430 1682 130 72 7 chr17 46734392 46734668 -38703812 - AluJb SINE Alu -18 294 1 652 309 116 40 chr17 46734668 46734680 -38703800 + L2 LINE L2 2883 2893 -420 1706 110 18 29 chr17 46734680 46734857 -38703623 - AluSx SINE Alu -7 305 131 2317 84 3 0 chr17 46734857 46735156 -38703324 - AluSp SINE Alu -13 300 1 1706 110 18 29 chr17 46735156 46735251 -38703229 - AluSx SINE Alu -181 131 36 652 309 116 40 chr17 46735251 46735626 -38702854 + L2 LINE L2 2893 3313 0 1376 235 55 37 chr17 46735673 46736056 -38702424 + MLT1B LTR MaLR 1 390 0 371 363 64 37 chr17 46736190 46736485 -38701995 + L2 LINE L2 2932 3234 -38 28 0 0 0 chr17 46736485 46736513 -38701967 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr17 46736560 46736590 -38701890 + AT_rich Low_complexity Low_complexity 1 30 0 2472 62 0 0 chr17 46736720 46737025 -38701455 - AluY SINE Alu -6 305 1 1894 122 31 0 chr17 46737190 46737476 -38701004 + MER47A DNA MER2_type 31 325 -41 180 382 40 30 chr17 46737563 46737762 -38700718 - L2 LINE L2 -492 2822 2622 1421 167 15 70 chr17 46738332 46738580 -38699900 + AluJo SINE Alu 1 228 -84 2130 92 0 23 chr17 46738580 46738883 -38699597 + AluY SINE Alu 1 296 -15 1421 167 15 70 chr17 46738883 46738963 -38699517 + AluJo SINE Alu 228 311 -1 451 129 0 0 chr17 46739050 46739112 -38699368 - AluJ/FLAM SINE Alu -249 63 2 234 296 49 25 chr17 46739131 46739212 -38699268 - L2 LINE L2 -74 3198 3116 213 222 22 0 chr17 46739311 46739356 -38699124 + MIR SINE MIR 213 258 -4 1832 142 13 16 chr17 46739365 46739668 -38698812 - AluJb SINE Alu -10 302 1 327 196 33 54 chr17 46740088 46740180 -38698300 + MIR SINE MIR 48 137 -71 2168 102 10 0 chr17 46740517 46740821 -38697659 + AluSx SINE Alu 1 307 -5 2029 107 16 7 chr17 46741072 46741380 -38697100 - AluSp SINE Alu -2 311 1 3305 125 75 77 chr17 46741532 46741607 -38696873 - Charlie5 DNA MER1_type -96 2528 2454 2190 103 3 0 chr17 46741607 46741909 -38696571 - AluSx SINE Alu -9 303 1 3305 125 75 77 chr17 46741909 46742562 -38695918 - Charlie5 DNA MER1_type -170 2454 1801 1750 129 8 0 chr17 46742564 46742849 -38695631 - AluSx SINE Alu 0 311 25 645 316 59 74 chr17 46742877 46743263 -38695217 - L1MDa LINE L1 -4966 1564 1168 579 220 68 15 chr17 46744068 46744200 -38694280 - MIR SINE MIR -18 244 106 1008 171 6 0 chr17 46744200 46744370 -38694110 + AluJb SINE Alu 129 299 -13 255 281 0 0 chr17 46744372 46744436 -38694044 - MIR SINE MIR -186 76 13 2068 118 0 28 chr17 46744998 46745319 -38693161 + AluSx SINE Alu 1 312 0 1463 174 27 34 chr17 46745934 46746227 -38692253 - AluJb SINE Alu -21 291 1 309 298 215 16 chr17 46747439 46747630 -38690850 - MIR SINE MIR -6 256 28 291 254 159 4 chr17 46748155 46748261 -38690219 - MIR SINE MIR -64 144 21 492 239 88 38 chr17 46748734 46748893 -38689587 + MIR3 SINE MIR 21 187 -21 335 283 50 0 chr17 46748966 46749065 -38689415 - MIR3 SINE MIR -7 201 98 640 267 17 73 chr17 46749425 46749566 -38688914 + MIR SINE MIR 23 148 -114 1536 166 0 71 chr17 46749566 46749892 -38688588 + AluJo SINE Alu 1 303 -9 640 267 17 73 chr17 46749892 46749982 -38688498 + MIR SINE MIR 148 241 -21 271 119 17 17 chr17 46749983 46750042 -38688438 + (CA)n Simple_repeat Simple_repeat 1 59 0 264 333 22 33 chr17 46750042 46750132 -38688348 - MIR3 SINE MIR -116 92 4 267 140 0 0 chr17 46750992 46751042 -38687438 + (CCCCAG)n Simple_repeat Simple_repeat 3 52 0 731 196 0 14 chr17 46752792 46752930 -38685550 + AluJo SINE Alu 1 136 -176 216 97 0 0 chr17 46753386 46753417 -38685063 + (GGGTG)n Simple_repeat Simple_repeat 1 31 0 2051 106 40 3 chr17 46753468 46753769 -38684711 + AluSq SINE Alu 1 312 -1 270 184 299 11 chr17 46753860 46753947 -38684533 - L2 LINE L2 0 3313 3202 1532 164 116 6 chr17 46754051 46754464 -38684016 - LTR54 LTR ERV1 0 498 2 1270 178 123 0 chr17 46754826 46755118 -38683362 + MER2 DNA MER2_type 1 328 -17 264 59 0 0 chr17 46755394 46755428 -38683052 + (GGA)n Simple_repeat Simple_repeat 1 34 0 1117 253 12 0 chr17 46755463 46755720 -38682760 - MIR SINE MIR -1 261 2 345 129 113 16 chr17 46756010 46756072 -38682408 - MIR3 SINE MIR -4 204 137 407 337 60 69 chr17 46756177 46756509 -38681971 - L1MC4a LINE L1 -1753 6055 5727 239 333 13 0 chr17 46756551 46756626 -38681854 - L1MC4a LINE L1 -2187 5621 5546 233 364 97 36 chr17 46756846 46757011 -38681469 - L3 LINE CR1 -95 1482 1308 427 344 55 0 chr17 46757051 46757179 -38681301 + MIR SINE MIR 17 151 -57 236 237 105 121 chr17 46757208 46757295 -38681185 - L3b LINE CR1 -295 1288 1201 1380 188 48 7 chr17 46757295 46757602 -38680878 - AluJo SINE Alu 0 318 1 236 237 105 121 chr17 46757602 46757703 -38680777 - L3b LINE CR1 -382 1201 1102 225 314 51 8 chr17 46758034 46758152 -38680328 + MIR SINE MIR 140 262 0 2269 100 3 0 chr17 46758204 46758515 -38679965 - AluSp SINE Alu 0 313 2 588 254 49 68 chr17 46758629 46758700 -38679780 - MIR SINE MIR -13 249 178 2045 126 0 3 chr17 46758700 46758994 -38679486 + AluSx SINE Alu 3 295 -17 588 254 49 68 chr17 46758994 46759127 -38679353 - MIR SINE MIR -84 178 49 189 300 0 38 chr17 46759132 46759212 -38679268 - MIR SINE MIR -1 261 185 2239 64 6 29 chr17 46759275 46759588 -38678892 + AluSp SINE Alu 1 306 -7 1941 129 10 10 chr17 46760030 46760340 -38678140 + AluSx SINE Alu 3 312 0 356 309 135 11 chr17 46760486 46760664 -38677816 - MIR SINE MIR -5 257 58 185 345 0 17 chr17 46760889 46760947 -38677533 - MIR SINE MIR -136 72 16 810 137 0 0 chr17 46761034 46761158 -38677322 - AluSg/x SINE Alu -15 295 172 297 190 35 0 chr17 46762164 46762222 -38676258 + U13 snRNA snRNA 1 60 -44 418 287 42 0 chr17 46764149 46764303 -38674177 + MIR SINE MIR 41 200 -61 1690 151 64 0 chr17 46765565 46765662 -38672818 - L1MB3 LINE L1 -7 6176 6087 2199 83 132 15 chr17 46765662 46765988 -38672492 - THE1B LTR MaLR 0 364 1 1690 151 64 0 chr17 46765988 46766049 -38672431 - L1MB3 LINE L1 -96 6087 5693 370 274 213 10 chr17 46766049 46766246 -38672234 - L1MD3 LINE L1 -1990 6005 5769 861 211 20 15 chr17 46767391 46767590 -38670890 - L1PA16 LINE L1 0 6166 5967 509 281 37 7 chr17 46767929 46768064 -38670416 - L2 LINE L2 0 3272 3134 708 237 72 25 chr17 46768109 46768345 -38670135 - MLT1J LTR MaLR -1 510 264 2386 87 0 3 chr17 46768367 46768679 -38669801 - AluSx SINE Alu -1 311 1 2427 116 47 133 chr17 46768951 46769424 -38669056 + Tigger2 DNA MER2_type 1 2716 -2 287 139 23 0 chr17 46770044 46770087 -38668393 - L2 LINE L2 -19 3253 3210 42 20 0 0 chr17 46770122 46770171 -38668309 + AT_rich Low_complexity Low_complexity 1 49 0 2279 103 0 0 chr17 46770247 46770549 -38667931 + AluSx SINE Alu 1 302 -10 1725 96 104 0 chr17 46770551 46770802 -38667678 + AluSg SINE Alu 3 279 -31 332 242 50 10 chr17 46771698 46771797 -38666683 + MIR3 SINE MIR 83 185 -23 1582 143 41 27 chr17 46772467 46772761 -38665719 + AluJb SINE Alu 1 298 -14 692 301 129 0 chr17 46773196 46773452 -38665028 + L3 LINE CR1 1288 1576 -1 1475 180 34 24 chr17 46773507 46773802 -38664678 - AluJb SINE Alu -14 298 1 1562 149 15 19 chr17 46774046 46774307 -38664173 - AluJo SINE Alu -52 260 1 2149 128 0 0 chr17 46774978 46775290 -38663190 - AluSx SINE Alu 0 312 1 1995 124 3 0 chr17 46775729 46776042 -38662438 + AluSx SINE Alu 1 314 0 1458 142 106 33 chr17 46776174 46776449 -38662031 - AluJo SINE Alu -17 295 1 576 267 0 0 chr17 46776449 46776584 -38661896 + MIR SINE MIR 122 256 -6 1461 198 3 25 chr17 46776686 46777004 -38661476 + AluJb SINE Alu 1 311 -1 668 271 52 14 chr17 46777098 46777308 -38661172 - MIR SINE MIR -43 219 2 289 230 115 0 chr17 46777409 46777496 -38660984 + MIR3 SINE MIR 89 185 -23 261 0 0 0 chr17 46777630 46777659 -38660821 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr17 46778138 46778160 -38660320 + GC_rich Low_complexity Low_complexity 1 22 0 201 196 18 18 chr17 46778171 46778227 -38660253 + (CGGGA)n Simple_repeat Simple_repeat 1 56 0 303 231 116 26 chr17 46779784 46779950 -38658530 - L1ME LINE L1 -4116 2280 2130 315 0 0 0 chr17 46779950 46779985 -38658495 + (TG)n Simple_repeat Simple_repeat 2 36 0 303 231 116 26 chr17 46779985 46780078 -38658402 - L1ME LINE L1 -4266 2130 1980 3068 110 66 112 chr17 46780078 46780697 -38657783 + MER4B LTR ERV1 1 591 -19 2932 175 79 100 chr17 46780813 46781145 -38657335 - L1MC4a LINE L1 0 7808 7470 1831 114 0 78 chr17 46781145 46781280 -38657200 + AluSx SINE Alu 1 145 -163 1938 121 4 4 chr17 46781280 46781560 -38656920 + AluSx SINE Alu 1 280 -32 1831 114 0 78 chr17 46781560 46781756 -38656724 + AluSx SINE Alu 145 308 0 2932 175 79 100 chr17 46781756 46782360 -38656120 - L1MC4a LINE L1 -338 7470 6891 213 297 66 22 chr17 46782373 46782464 -38656016 - L3 LINE CR1 -291 1292 1198 370 62 0 0 chr17 46782465 46782513 -38655967 + (TTTTA)n Simple_repeat Simple_repeat 2 110 0 1773 187 0 3 chr17 46782513 46782797 -38655683 - AluJo SINE Alu -29 283 1 778 272 64 35 chr17 46782797 46782816 -38655664 - L1ME LINE L1 -4926 1470 1453 2270 115 0 0 chr17 46782816 46783121 -38655359 - AluSx SINE Alu -7 305 1 778 272 64 35 chr17 46783121 46783715 -38654765 - L1ME LINE L1 -4943 1453 801 690 165 0 0 chr17 46783726 46783829 -38654651 + FLAM_A SINE Alu 18 120 -22 235 127 0 36 chr17 46783829 46783884 -38654596 + FAM SINE Alu 127 179 0 851 219 7 0 chr17 46784020 46784175 -38654305 + FRAM SINE Alu 1 156 -20 3793 132 18 25 chr17 46784428 46784670 -38653810 - L1MC1 LINE L1 -2 6331 6089 2322 103 0 0 chr17 46784670 46784971 -38653509 - AluSx SINE Alu -11 301 1 3793 132 18 25 chr17 46784971 46785404 -38653076 - L1MC1 LINE L1 -244 6089 5661 651 179 12 0 chr17 46785405 46785541 -38652939 - L1MC1 LINE L1 -695 5471 5333 502 349 23 14 chr17 46785793 46786145 -38652335 - L1ME LINE L1 -6014 382 28 317 343 9 9 chr17 46786648 46786753 -38651727 + MIR SINE MIR 36 140 -122 290 348 59 0 chr17 46787166 46787284 -38651196 - L2 LINE L2 -3 3269 3145 758 181 7 14 chr17 46787842 46788139 -38650341 + GA-rich Low_complexity Low_complexity 1 295 0 6015 190 143 36 chr17 46788464 46789999 -38648481 - MER52A LTR ERV1 0 1755 56 24 0 0 0 chr17 46790883 46790907 -38647573 + AT_rich Low_complexity Low_complexity 1 24 0 283 202 138 96 chr17 46790918 46791012 -38647468 - FRAM/FAM SINE Alu -94 81 1 575 270 0 33 chr17 46791352 46791504 -38646976 + MIR SINE MIR 108 254 -8 211 159 14 58 chr17 46791833 46791902 -38646578 + GA-rich Low_complexity Low_complexity 4 69 0 443 261 61 27 chr17 46792508 46792724 -38645756 + MIR SINE MIR 23 250 -12 198 0 0 0 chr17 46792736 46792758 -38645722 + (CAT)n Simple_repeat Simple_repeat 2 23 0 201 290 48 0 chr17 46792760 46792822 -38645658 + MIR3 SINE MIR 100 164 -44 3968 92 3 14 chr17 46793280 46793650 -38644830 - L1PB3 LINE L1 -7 6147 5784 2153 120 0 0 chr17 46793650 46793949 -38644531 - AluSx SINE Alu -13 299 1 3968 92 3 14 chr17 46793949 46794144 -38644336 - L1PB3 LINE L1 -370 5784 5588 231 114 0 0 chr17 46794608 46794643 -38643837 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 564 138 23 0 chr17 46794644 46794731 -38643749 - AluJ SINE Alu -191 121 33 216 267 0 0 chr17 46794779 46794824 -38643656 - MIR SINE MIR -8 254 210 1146 207 0 5 chr17 46794825 46795028 -38643452 - AluJo SINE Alu -106 206 5 398 273 15 0 chr17 46795030 46795139 -38643341 - MIR SINE MIR -54 154 40 2347 73 0 7 chr17 46795159 46795447 -38643033 + AluSq SINE Alu 14 299 -14 230 0 0 32 chr17 46795751 46795782 -38642698 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 1439 253 113 6 chr17 46796470 46797008 -38641472 - L1ME3A LINE L1 -12 6158 5563 2188 260 117 25 chr17 46797115 46798205 -38640275 - L1ME3A LINE L1 -1327 4819 3630 262 226 69 39 chr17 46798316 46798418 -38640062 - L1M LINE L1 -863 5428 5324 200 214 18 0 chr17 46798663 46798719 -38639761 + (TA)n Simple_repeat Simple_repeat 2 58 0 3007 204 18 4 chr17 46798843 46799549 -38638931 + L1 LINE L1 3829 4544 -1602 335 324 106 40 chr17 46800631 46800906 -38637574 - L2 LINE L2 -65 3207 2915 2081 127 10 3 chr17 46801074 46801365 -38637115 + AluSx SINE Alu 16 308 -4 3502 126 51 94 chr17 46801371 46802218 -38636262 + L1MA7 LINE L1 5467 6276 -15 33 25 0 0 chr17 46802220 46802260 -38636220 + AT_rich Low_complexity Low_complexity 1 40 0 215 186 0 23 chr17 46802382 46802425 -38636055 - MIR SINE MIR -130 132 91 28 0 0 0 chr17 46803059 46803087 -38635393 + GC_rich Low_complexity Low_complexity 1 28 0 733 291 114 3 chr17 46803881 46804153 -38634327 + L2 LINE L2 1672 1991 -1323 1355 153 71 71 chr17 46804153 46804447 -38634033 - AluJo SINE Alu -18 294 1 733 291 114 3 chr17 46804447 46804517 -38633963 + L2 LINE L2 1991 2052 -1262 1212 260 99 26 chr17 46804517 46805028 -38633452 + L2 LINE L2 2678 3237 -76 424 58 14 14 chr17 46805028 46805097 -38633383 + (TA)n Simple_repeat Simple_repeat 2 70 0 1212 260 99 26 chr17 46805097 46805180 -38633300 + L2 LINE L2 3237 3313 0 254 234 0 31 chr17 46805546 46805610 -38632870 + CT-rich Low_complexity Low_complexity 3 64 0 1995 135 21 0 chr17 46806266 46806585 -38631895 - AluSg1 SINE Alu 0 309 1 2107 103 17 10 chr17 46806585 46806877 -38631603 - AluSc SINE Alu -15 294 1 423 281 52 0 chr17 46806934 46807030 -38631450 + MIR SINE MIR 20 120 -142 966 167 51 102 chr17 46807964 46808239 -38630241 - MER92B LTR ERV1 -2 634 374 * 1361 149 32 4 chr17 46808235 46808484 -38629996 - MER92B LTR ERV1 -380 256 1 5254 133 43 4 chr17 46809437 46810536 -38627944 - L1PB3 LINE L1 -1 6153 5012 5009 138 29 1 chr17 46810539 46811381 -38627099 - L1MC1 LINE L1 -8 6325 5461 5045 149 31 36 chr17 46811406 46813254 -38625226 - L1MA7 LINE L1 -2 6289 4457 1077 158 59 30 chr17 46813267 46813639 -38624841 - L1MC1 LINE L1 -743 5403 5090 1813 174 7 0 chr17 46813757 46814050 -38624430 + AluJo SINE Alu 1 295 -17 2118 134 134 8 chr17 46814695 46815075 -38623405 - MSTA LTR MaLR 0 428 1 2141 103 0 55 chr17 46815253 46815416 -38623064 - AluSg SINE Alu -15 295 156 2363 94 0 0 chr17 46815416 46815714 -38622766 - AluY SINE Alu -13 298 1 2141 103 0 55 chr17 46815714 46815862 -38622618 - AluSg SINE Alu -154 156 1 26 50 0 0 chr17 46815976 46816016 -38622464 + AT_rich Low_complexity Low_complexity 1 40 0 917 135 198 0 chr17 46816407 46816614 -38621866 + L1PB4 LINE L1 5909 6156 0 1430 170 59 56 chr17 46816723 46817180 -38621300 - LTR56 LTR ERV1 0 445 9 361 240 56 100 chr17 46817301 46817367 -38621113 - MER112 DNA MER1_type -17 243 176 1905 178 0 0 chr17 46817367 46817671 -38620809 - AluJo SINE Alu -6 306 3 361 240 56 100 chr17 46817671 46817854 -38620626 - MER112 DNA MER1_type -84 176 5 258 44 22 0 chr17 46818032 46818077 -38620403 + L1MA7 LINE L1 6245 6290 -1 34 55 0 0 chr17 46818087 46818142 -38620338 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr17 46818186 46818207 -38620273 + AT_rich Low_complexity Low_complexity 1 21 0 1887 131 70 43 chr17 46818411 46818739 -38619741 - MER1B DNA MER1_type 0 337 1 438 132 0 15 chr17 46818771 46818839 -38619641 + AluS SINE Alu 229 295 -14 1745 186 111 127 chr17 46818940 46819471 -38619009 + L1MC5 LINE L1 6693 7231 -730 878 203 11 40 chr17 46819471 46819648 -38618832 + FAM SINE Alu 1 172 -3 1745 186 111 127 chr17 46819648 46819714 -38618766 + L1MC5 LINE L1 7231 7297 -664 2030 132 9 49 chr17 46819714 46820039 -38618441 - AluSx SINE Alu 0 312 1 1745 186 111 127 chr17 46820039 46820489 -38617991 + L1MC5 LINE L1 7297 7720 -241 1757 146 44 14 chr17 46820489 46820784 -38617696 - AluSx SINE Alu -8 304 1 1745 186 111 127 chr17 46820784 46820986 -38617494 + L1MC5 LINE L1 7720 7924 -37 409 238 69 49 chr17 46821414 46821685 -38616795 - MLT1C LTR MaLR -161 306 27 1494 316 54 28 chr17 46821737 46822718 -38615762 - L1MEd LINE L1 -4865 1254 248 26 50 0 0 chr17 46823103 46823143 -38615337 + AT_rich Low_complexity Low_complexity 1 40 0 505 260 72 28 chr17 46823538 46823719 -38614761 + MIR3 SINE MIR 11 199 -9 182 392 59 0 chr17 46824906 46825059 -38613421 + L2 LINE L2 1206 1367 -1947 24 53 0 0 chr17 46825069 46825107 -38613373 + AT_rich Low_complexity Low_complexity 1 38 0 2812 164 12 37 chr17 46825166 46825734 -38612746 - L1MB1 LINE L1 -1 6167 5614 245 363 97 0 chr17 46825934 46826058 -38612422 + L2 LINE L2 1764 1899 -1415 1694 166 6 66 chr17 46826100 46826419 -38612061 + AluJo SINE Alu 1 300 -12 966 199 183 6 chr17 46827719 46828119 -38610361 - L1ME LINE L1 -663 5503 5064 2857 25 0 0 chr17 46828879 46829197 -38609283 - AluYb8 SINE Alu 0 318 1 23 33 0 0 chr17 46829299 46829329 -38609151 + AT_rich Low_complexity Low_complexity 1 30 0 2521 176 24 18 chr17 46830040 46830403 -38608077 - L1PB4 LINE L1 -1 6871 6512 234 0 0 0 chr17 46830403 46830429 -38608051 + (TG)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr17 46830428 46830452 -38608028 + (CG)n Simple_repeat Simple_repeat 2 25 0 * 2521 176 24 18 chr17 46830429 46831023 -38607457 - L1PB4 LINE L1 -360 6512 5923 2502 60 0 3 chr17 46831023 46831325 -38607155 - AluY SINE Alu -10 301 1 2521 176 24 18 chr17 46831325 46832384 -38606096 - L1PB4 LINE L1 -949 5923 4688 2136 122 0 3 chr17 46832399 46832719 -38605761 - AluSx SINE Alu 0 319 1 12236 116 98 23 chr17 46832976 46834694 -38603786 - L1PB4 LINE L1 -2972 3890 2302 2406 90 0 0 chr17 46834694 46834993 -38603487 - AluSc SINE Alu -9 300 2 12236 116 98 23 chr17 46834993 46836301 -38602179 - L1PB4 LINE L1 -4560 2302 636 656 199 7 0 chr17 46836303 46836439 -38602041 - L1PB4 LINE L1 -6663 200 64 2046 85 4 0 chr17 46836580 46836838 -38601642 - AluSx SINE Alu -53 259 1 441 141 0 0 chr17 46836945 46837016 -38601464 + L1PBa LINE L1 1 71 -6792 409 207 98 30 chr17 46837558 46837761 -38600719 - L1M4 LINE L1 -754 5392 5176 1138 186 12 12 chr17 46837905 46838152 -38600328 - L1M4 LINE L1 -6289 253 7 1899 153 3 7 chr17 46838174 46838469 -38600011 + AluJb SINE Alu 1 294 -18 7265 39 8 0 chr17 46838748 46839983 -38598497 - L1PA3 LINE L1 0 6155 4915 26 64 0 0 chr17 46840017 46840064 -38598416 + AT_rich Low_complexity Low_complexity 1 47 0 22 56 0 0 chr17 46840119 46840155 -38598325 + AT_rich Low_complexity Low_complexity 1 36 0 202 211 0 0 chr17 46840659 46840697 -38597783 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 7985 37 41 14 chr17 46841184 46841866 -38596614 + LTR13 LTR ERVK 1 718 -289 201 39 0 0 chr17 46841866 46841892 -38596588 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 7985 37 41 14 chr17 46841892 46842190 -38596290 + LTR13 LTR ERVK 718 1007 0 1593 210 17 0 chr17 46842194 46842485 -38595995 - AluJo SINE Alu -16 296 1 472 345 59 78 chr17 46842487 46842861 -38595619 - L2 LINE L2 0 3272 2906 203 286 186 0 chr17 46843209 46843279 -38595201 + MIR SINE MIR 151 233 -29 214 214 71 0 chr17 46843295 46843351 -38595129 + L2 LINE L2 2440 2499 -815 1974 88 4 0 chr17 46843463 46843713 -38594767 - AluSc SINE Alu -42 267 17 710 362 115 24 chr17 46843714 46844385 -38594095 + L2 LINE L2 2550 3272 0 268 367 82 0 chr17 46849152 46849250 -38589230 - L2 LINE L2 -44 3228 3123 22 0 0 0 chr17 46849855 46849877 -38588603 + GC_rich Low_complexity Low_complexity 1 22 0 378 310 175 54 chr17 46849878 46850397 -38588083 - L1M2 LINE L1 -5624 1225 644 225 154 0 0 chr17 46850444 46850483 -38587997 + CT-rich Low_complexity Low_complexity 2 40 0 2134 82 7 0 chr17 46850944 46851261 -38587219 - AluSx SINE Alu 0 319 1 2354 80 7 0 chr17 46851401 46851702 -38586778 - AluSc SINE Alu -6 303 1 288 70 0 0 chr17 46851951 46851994 -38586486 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 887 133 0 15 chr17 46852166 46852301 -38586179 + FLAM_C SINE Alu 1 133 -10 451 301 190 13 chr17 46852905 46853122 -38585358 + MIR SINE MIR 10 262 0 363 200 152 9 chr17 46853422 46853527 -38584953 + L2 LINE L2 3187 3306 -7 1366 198 6 74 chr17 46854440 46854596 -38583884 - L1ME1 LINE L1 -8 6158 5993 857 155 0 0 chr17 46854596 46854725 -38583755 - FLAM_C SINE Alu -2 131 3 1366 198 6 74 chr17 46854725 46854931 -38583549 - L1ME1 LINE L1 -173 5993 5821 271 153 17 17 chr17 46855345 46855404 -38583076 - U7 snRNA snRNA -3 60 2 2395 67 3 0 chr17 46855602 46855909 -38582571 + AluSp SINE Alu 1 308 0 261 291 26 86 chr17 46856138 46856255 -38582225 + MIR SINE MIR 20 129 -133 1711 122 7 17 chr17 46856816 46857103 -38581377 - L1MA8 LINE L1 -5 6286 6003 2288 110 0 0 chr17 46857503 46857803 -38580677 - AluSx SINE Alu -12 300 1 748 268 19 35 chr17 46857907 46858168 -38580312 - L1ME1 LINE L1 -2016 5792 5536 474 264 34 73 chr17 46858538 46858716 -38579764 - MIR3 SINE MIR -22 186 16 229 214 186 0 chr17 46858825 46858895 -38579585 - MIR SINE MIR -6 256 174 260 324 19 9 chr17 46859043 46859148 -38579332 - MIR SINE MIR -86 122 17 260 250 47 0 chr17 46859379 46859443 -38579037 + L2 LINE L2 3023 3089 -224 2068 133 7 0 chr17 46859477 46859771 -38578709 - AluSx SINE Alu -16 296 1 2363 155 8 78 chr17 46859771 46860354 -38578126 - L1 LINE L1 -815 6291 5752 2214 110 0 0 chr17 46860354 46860644 -38577836 - AluSx SINE Alu -22 290 1 2363 155 8 78 chr17 46860644 46860679 -38577801 - L1 LINE L1 -1354 5752 5716 731 62 0 0 chr17 46860679 46860775 -38577705 - THE1B LTR MaLR 0 364 269 2536 265 75 33 chr17 46860775 46862272 -38576208 - L1M1 LINE L1 -3957 3608 2050 307 182 0 30 chr17 46862274 46862340 -38576140 - L1 LINE L1 -5164 1866 1803 26 30 0 0 chr17 46862451 46862484 -38575996 + AT_rich Low_complexity Low_complexity 1 33 0 189 229 42 0 chr17 46862583 46862631 -38575849 + MIR SINE MIR 163 212 -50 771 141 83 0 chr17 46863823 46863944 -38574536 - AluJo SINE Alu -176 136 6 386 173 0 0 chr17 46863945 46864020 -38574460 + L1MB4 LINE L1 6046 6120 -60 1606 187 0 17 chr17 46864026 46864326 -38574154 - AluJo SINE Alu -17 295 1 1607 204 44 3 chr17 46865379 46865742 -38572738 - L1MC4a LINE L1 -115 7693 7316 267 79 0 0 chr17 46865895 46865933 -38572547 + (CA)n Simple_repeat Simple_repeat 2 39 0 1735 167 0 0 chr17 46865934 46866192 -38572288 - AluSx SINE Alu -54 258 1 386 250 87 0 chr17 46867659 46867751 -38570729 + L2 LINE L2 3168 3267 -5 191 273 118 82 chr17 46868079 46868189 -38570291 + MIR SINE MIR 72 185 -77 288 206 175 0 chr17 46868358 46868455 -38570025 - L1MB7 LINE L1 -1 6183 6070 25623 114 31 43 chr17 46868822 46869605 -38568875 - L1PA7 LINE L1 -11 6458 5667 1977 118 0 7 chr17 46869605 46869877 -38568603 - AluSc SINE Alu -4 305 36 25623 114 31 43 chr17 46869877 46873503 -38564977 - L1PA7 LINE L1 -802 5667 2059 2393 60 3 7 chr17 46873503 46873801 -38564679 - AluY SINE Alu -14 297 1 25623 114 31 43 chr17 46873801 46875831 -38562649 - L1PA7 LINE L1 -4410 2059 5 2064 212 23 0 chr17 46875838 46876319 -38562161 - L1 LINE L1 -3291 3037 2546 * 4126 220 22 2 chr17 46876318 46877263 -38561217 - L1 LINE L1 -4351 977 14 1811 219 36 16 chr17 46877279 46877772 -38560708 - L1ME1 LINE L1 -304 5862 5360 1572 187 7 17 chr17 46877775 46878064 -38560416 - AluJo SINE Alu -22 290 5 197 159 23 0 chr17 46878910 46878954 -38559526 + (TG)n Simple_repeat Simple_repeat 2 46 0 186 43 0 0 chr17 46879055 46879078 -38559402 + (CA)n Simple_repeat Simple_repeat 1 23 0 315 71 0 0 chr17 46879639 46879681 -38558799 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 1606 185 14 7 chr17 46879686 46879972 -38558508 - AluJo SINE Alu -24 288 1 25 31 0 0 chr17 46880395 46880427 -38558053 + AT_rich Low_complexity Low_complexity 1 32 0 37 23 0 0 chr17 46880511 46880555 -38557925 + AT_rich Low_complexity Low_complexity 1 44 0 366 192 80 16 chr17 46880795 46880920 -38557560 + L1MC5 LINE L1 7799 7931 -30 809 242 164 48 chr17 46880981 46881832 -38556648 + L1ME LINE L1 4490 5445 -733 542 182 0 0 chr17 46881853 46881941 -38556539 - FLAM_A SINE Alu -54 88 1 468 268 61 31 chr17 46882020 46882248 -38556232 + L1ME LINE L1 5551 5785 -385 1259 140 11 0 chr17 46882271 46882505 -38555975 + AluSg/x SINE Alu 102 337 0 22 94 0 0 chr17 46882653 46882717 -38555763 + AT_rich Low_complexity Low_complexity 1 64 0 186 320 97 10 chr17 46883224 46883327 -38555153 - L2 LINE L2 -4 3268 3157 426 332 108 8 chr17 46883735 46883976 -38554504 + L2 LINE L2 932 1196 -2118 283 264 56 40 chr17 46884024 46884149 -38554331 + L2 LINE L2 2632 2758 -556 22 0 0 0 chr17 46884302 46884324 -38554156 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr17 46884885 46884917 -38553563 + AT_rich Low_complexity Low_complexity 1 32 0 1770 124 7 17 chr17 46886247 46886537 -38551943 - L1MA8 LINE L1 -2 6289 6003 372 277 90 58 chr17 46886713 46886901 -38551579 - L1ME4a LINE L1 0 6121 5928 2243 113 0 0 chr17 46886932 46887224 -38551256 - AluSx SINE Alu -7 305 14 2323 94 10 0 chr17 46887240 46887537 -38550943 - AluY SINE Alu -11 300 1 318 179 30 15 chr17 46887580 46887647 -38550833 - AluJ/FRAM SINE Alu -3 299 232 369 248 35 48 chr17 46887711 46887856 -38550624 - LTR37B LTR ERV1 -321 147 5 529 49 25 12 chr17 46887856 46887937 -38550543 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 2317 116 0 3 chr17 46887947 46888258 -38550222 - AluSx SINE Alu -2 310 1 268 300 10 50 chr17 46888866 46888966 -38549514 - MIR SINE MIR -147 115 20 187 329 13 40 chr17 46889239 46889315 -38549165 + MIR3 SINE MIR 107 180 -28 772 163 23 8 chr17 46889997 46890126 -38548354 - FLAM_C SINE Alu -11 132 2 2342 115 0 0 chr17 46891974 46892279 -38546201 - AluSx SINE Alu -7 305 1 792 271 22 33 chr17 46892371 46892644 -38545836 - L1ME4a LINE L1 -2003 5805 5536 479 264 34 73 chr17 46893013 46893191 -38545289 - MIR3 SINE MIR -22 186 16 233 214 186 0 chr17 46893300 46893370 -38545110 - MIR SINE MIR -6 256 174 276 343 19 9 chr17 46893518 46893623 -38544857 - MIR SINE MIR -86 122 17 268 250 47 0 chr17 46893854 46893918 -38544562 + L2 LINE L2 3023 3089 -224 2100 132 3 0 chr17 46893952 46894247 -38544233 - AluSx SINE Alu -16 296 1 1015 294 156 27 chr17 46894333 46894371 -38544109 + L2 LINE L2 2429 2461 -852 2329 139 139 0 chr17 46894371 46894787 -38543693 - MER101 LTR ERV1 0 474 1 1015 294 156 27 chr17 46894787 46895520 -38542960 + L2 LINE L2 2461 3300 -13 186 103 0 0 chr17 46895521 46895550 -38542930 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 1806 184 94 18 chr17 46895740 46896174 -38542306 - MLT1C LTR MaLR 0 467 1 1772 165 0 14 chr17 46897048 46897327 -38541153 - AluJb SINE Alu -24 288 14 353 241 9 74 chr17 46897545 46897565 -38540915 - MIR SINE MIR 0 262 242 180 0 0 0 chr17 46897565 46897585 -38540895 + (CAG)n Simple_repeat Simple_repeat 1 20 0 353 241 9 74 chr17 46897585 46897672 -38540808 - MIR SINE MIR -20 242 162 2836 86 0 21 chr17 46898322 46898705 -38539775 - THE1C LTR MaLR 0 375 1 10757 104 30 35 chr17 46898705 46900294 -38538186 - THE1C-int LTR MaLR 0 1580 1 2652 118 11 8 chr17 46900294 46900668 -38537812 - THE1C LTR MaLR 0 375 1 254 329 0 0 chr17 46901610 46901683 -38536797 - MIR SINE MIR -121 141 69 840 231 33 81 chr17 46901766 46902099 -38536381 - LTR37B LTR ERV1 0 468 110 372 161 0 0 chr17 46902138 46902200 -38536280 - MLT1A2 LTR MaLR 0 374 313 2133 110 3 29 chr17 46902203 46902511 -38535969 - AluSq SINE Alu -11 302 3 2352 91 10 0 chr17 46902515 46902812 -38535668 - AluY SINE Alu -11 300 1 318 179 30 15 chr17 46902855 46902922 -38535558 - AluJ/FRAM SINE Alu -3 299 232 369 248 35 48 chr17 46902986 46903131 -38535349 - LTR37B LTR ERV1 -321 147 5 529 49 25 12 chr17 46903131 46903212 -38535268 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 2317 116 0 3 chr17 46903222 46903533 -38534947 - AluSx SINE Alu -2 310 1 268 300 10 50 chr17 46904141 46904241 -38534239 - MIR SINE MIR -147 115 20 187 329 13 40 chr17 46904514 46904590 -38533890 + MIR3 SINE MIR 107 180 -28 772 163 23 8 chr17 46905272 46905401 -38533079 - FLAM_C SINE Alu -11 132 2 207 161 0 0 chr17 46905644 46905675 -38532805 + polypyrimidine Low_complexity Low_complexity 2 32 0 209 319 0 14 chr17 46907721 46907790 -38530690 + MER5B DNA MER1_type 29 96 -82 971 179 0 0 chr17 46907906 46908057 -38530423 + FAM SINE Alu 18 168 -17 246 127 197 0 chr17 46908059 46908130 -38530350 - MER53 DNA DNA -11 178 94 2133 100 28 10 chr17 46908765 46909054 -38529426 + AluSp SINE Alu 2 295 -18 1999 124 7 13 chr17 46909114 46909421 -38529059 + MER1B DNA MER1_type 35 339 0 1967 163 0 0 chr17 46910809 46911115 -38527365 - AluSx SINE Alu -6 306 1 542 227 4 164 chr17 46911387 46911643 -38526837 + MIR SINE MIR 37 251 -11 415 320 153 0 chr17 46911860 46912010 -38526470 - MIR3 SINE MIR -16 192 20 468 255 35 135 chr17 46912228 46912361 -38526119 - MIR SINE MIR 0 262 170 1179 143 27 62 chr17 46912361 46912409 -38526071 - L1MB3 LINE L1 -4 6179 6131 2217 128 0 0 chr17 46912409 46912707 -38525773 - AluSx SINE Alu -14 298 1 1179 143 27 62 chr17 46912707 46912917 -38525563 - L1MB3 LINE L1 -52 6131 5930 468 255 35 135 chr17 46912917 46913070 -38525410 - MIR SINE MIR -92 170 3 277 345 12 0 chr17 46913085 46913169 -38525311 - L2 LINE L2 -38 3234 3150 189 74 0 0 chr17 46913334 46913361 -38525119 + (CTATT)n Simple_repeat Simple_repeat 4 30 0 299 263 12 0 chr17 46913365 46913445 -38525035 + MER112 DNA MER1_type 179 259 -1 693 118 0 18 chr17 46913520 46913630 -38524850 - FLAM_C SINE Alu 0 143 36 340 252 39 39 chr17 46914153 46914262 -38524218 + MIR SINE MIR 6 114 -94 206 69 0 0 chr17 46914264 46914293 -38524187 + L2 LINE L2 3273 3301 -12 1836 152 10 20 chr17 46915788 46916090 -38522390 + AluJb SINE Alu 1 299 -13 479 289 139 26 chr17 46916327 46916521 -38521959 - MIR SINE MIR -40 222 7 218 340 278 21 chr17 46917732 46917876 -38520604 - MER91A DNA MER1_type -1 195 15 1735 176 0 11 chr17 46918082 46918361 -38520119 + AluJo SINE Alu 1 276 -36 1504 156 141 0 chr17 46918371 46918640 -38519840 - AluJo SINE Alu 0 312 6 354 45 0 0 chr17 46918660 46918704 -38519776 + (GA)n Simple_repeat Simple_repeat 2 45 0 570 324 173 8 chr17 46918707 46919078 -38519402 + L3b LINE CR1 1145 1576 -7 295 302 50 94 chr17 46919168 46919466 -38519014 - L2 LINE L2 -10 3262 2978 1269 121 43 43 chr17 46919788 46919995 -38518485 - AluJo SINE Alu -19 293 87 263 93 23 0 chr17 46920905 46920948 -38517532 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 805 152 199 0 chr17 46923467 46923638 -38514842 - MER3 DNA MER1_type -4 205 1 2376 89 3 0 chr17 46924070 46924363 -38514117 - AluSc SINE Alu -15 294 1 861 240 188 9 chr17 46926258 46926604 -38511876 + LTR16A1 LTR ERVL 44 451 -6 1725 165 0 0 chr17 46926735 46926996 -38511484 - AluJo SINE Alu -51 261 1 231 170 0 75 chr17 46926998 46927051 -38511429 - L2 LINE L2 -568 2746 2698 1198 166 32 37 chr17 46927051 46927268 -38511212 + MER20 DNA MER1_type 1 216 -3 507 254 9 9 chr17 46927667 46927781 -38510699 + MIR SINE MIR 9 122 -140 1825 135 22 4 chr17 46927856 46928130 -38510350 + AluSx SINE Alu 21 299 -13 1286 200 0 4 chr17 46928144 46928374 -38510106 + AluJo SINE Alu 84 312 0 27 0 0 0 chr17 46928576 46928603 -38509877 + AT_rich Low_complexity Low_complexity 1 27 0 990 226 6 0 chr17 46930440 46930617 -38507863 + MER45A DNA AcHobo 1 178 0 198 0 0 0 chr17 46930809 46930831 -38507649 + (TG)n Simple_repeat Simple_repeat 2 23 0 278 116 232 0 chr17 46931321 46931390 -38507090 - MIR SINE MIR -29 179 94 309 267 215 41 chr17 46932196 46932368 -38506112 - MIR SINE MIR -56 206 5 227 261 54 22 chr17 46932422 46932514 -38505966 + MIR SINE MIR 41 135 -127 563 255 161 0 chr17 46932755 46932916 -38505564 - MIR SINE MIR -23 239 53 355 194 43 11 chr17 46933795 46933888 -38504592 - MER53 DNA DNA -76 113 18 2319 123 0 0 chr17 46933890 46934200 -38504280 - AluSx SINE Alu -2 310 1 898 236 12 62 chr17 46935149 46935391 -38503089 - MIR SINE MIR -5 257 28 426 292 38 48 chr17 46935437 46935557 -38502923 - Charlie8 DNA MER1_type -50 280 160 949 181 0 0 chr17 46935557 46935712 -38502768 - AluJb SINE Alu -2 310 156 1666 168 30 36 chr17 46935565 46935869 -38502611 - AluJb SINE Alu -10 302 1 426 292 38 48 chr17 46935869 46935949 -38502531 - Charlie8 DNA MER1_type -327 3 74 2132 110 7 0 chr17 46935952 46936272 -38502208 - AluSq SINE Alu 0 322 1 1172 136 5 28 chr17 46936277 46936491 -38501989 - L1PA15 LINE L1 -2 6163 5955 275 145 14 0 chr17 46937386 46937455 -38501025 + (TG)n Simple_repeat Simple_repeat 2 71 0 358 377 30 6 chr17 46938852 46939019 -38499461 + MIR3 SINE MIR 37 207 -1 2215 111 0 7 chr17 46940014 46940312 -38498168 - AluSq SINE Alu -17 296 1 2526 55 0 10 chr17 46940377 46940687 -38497793 - AluY SINE Alu -4 307 1 1105 121 0 6 chr17 46940960 46941126 -38497354 - AluSg/x SINE Alu -11 301 137 2228 121 0 0 chr17 46941129 46941434 -38497046 - AluSx SINE Alu -7 305 1 1043 182 11 0 chr17 46941656 46941843 -38496637 + MER5A DNA MER1_type 1 189 0 1591 202 24 14 chr17 46942326 46942618 -38495862 - AluJb SINE Alu -17 295 1 426 232 30 0 chr17 46943615 46943714 -38494766 + MLT1J LTR MaLR 1 102 -409 238 157 39 0 chr17 46943726 46943777 -38494703 + L1 LINE L1 4269 4321 -1825 528 304 36 0 chr17 46943777 46943945 -38494535 + MLT1J LTR MaLR 123 296 -215 23 0 0 0 chr17 46943973 46943996 -38494484 + AT_rich Low_complexity Low_complexity 1 23 0 763 152 0 24 chr17 46943996 46944121 -38494359 - FLAM_A SINE Alu -10 123 2 2895 180 19 0 chr17 46944128 46944650 -38493830 - MLT1F1 LTR MaLR 0 567 36 1723 202 118 18 chr17 46944656 46944834 -38493646 + MLT1D LTR MaLR 10 169 -336 2206 133 0 7 chr17 46944834 46945142 -38493338 + AluSx SINE Alu 1 306 -6 1723 202 118 18 chr17 46945142 46945414 -38493066 + MLT1D LTR MaLR 169 505 0 229 150 0 0 chr17 46945414 46945454 -38493026 - MLT1F1 LTR MaLR -527 40 1 427 272 51 115 chr17 46945459 46945893 -38492587 - MLT1F1-int LTR MaLR -5 1366 961 2228 89 3 7 chr17 46946262 46946553 -38491927 - AluSx SINE Alu -22 290 1 7248 161 47 36 chr17 46946754 46947748 -38490732 + L1 LINE L1 3690 4711 -1435 2296 95 0 25 chr17 46947748 46948064 -38490416 + AluSg SINE Alu 1 308 -2 7248 161 47 36 chr17 46948064 46948720 -38489760 + L1 LINE L1 4711 5358 -788 614 138 0 0 chr17 46948723 46948810 -38489670 - FLAM SINE Alu -18 125 39 6514 123 73 9 chr17 46948911 46950043 -38488437 - Tigger2 DNA MER2_type -379 2339 1135 1451 46 0 0 chr17 46950164 46950339 -38488141 + L1PA3 LINE L1 5981 6155 0 25 0 0 0 chr17 46950417 46950442 -38488038 + AT_rich Low_complexity Low_complexity 1 25 0 1633 161 19 13 chr17 46951050 46951360 -38487120 - L1MB7 LINE L1 -13 6171 5860 2036 130 3 3 chr17 46951361 46951685 -38486795 - L1PA16 LINE L1 0 6166 5843 261 135 0 0 chr17 46951732 46951769 -38486711 - Tigger2 DNA MER2_type 0 2718 2682 1827 146 31 10 chr17 46952006 46952300 -38486180 + AluJb SINE Alu 1 300 -12 207 0 0 0 chr17 46952347 46952370 -38486110 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5864 44 28 11 chr17 46952370 46953092 -38485388 - SVA Other Other -18 1368 635 320 219 14 0 chr17 46953192 46953265 -38485215 - L1M4 LINE L1 -1328 4818 4745 263 261 15 15 chr17 46953480 46953610 -38484870 + L1MEc LINE L1 1375 1504 -4892 1656 173 37 0 chr17 46953614 46953914 -38484566 + AluJo SINE Alu 1 310 0 25 31 0 0 chr17 46954151 46954183 -38484297 + AT_rich Low_complexity Low_complexity 1 32 0 2557 84 11 57 chr17 46954232 46954685 -38483795 + SVA Other Other 1 432 -954 851 201 0 13 chr17 46954685 46954844 -38483636 - AluSx SINE Alu -155 157 1 610 203 7 0 chr17 46954844 46954982 -38483498 - L1MC4 LINE L1 -414 7628 7490 6551 58 17 59 chr17 46955114 46956652 -38481828 + SVA Other Other 187 1386 0 2065 265 142 31 chr17 46956669 46957997 -38480483 + L1M4 LINE L1 3280 4755 -1391 293 336 0 0 chr17 46958005 46958127 -38480353 + L1M4 LINE L1 4862 4983 -1163 629 222 18 25 chr17 46958136 46958411 -38480069 + L1MC4 LINE L1 7685 8042 0 21 0 0 0 chr17 46958438 46958459 -38480021 + GC_rich Low_complexity Low_complexity 1 21 0 2852 3 0 0 chr17 46959883 46960190 -38478290 - AluY SINE Alu -4 307 1 184 338 27 0 chr17 46961803 46961877 -38476603 + MIR3 SINE MIR 98 173 -35 327 301 39 0 chr17 46962000 46962103 -38476377 + MIR SINE MIR 86 192 -70 305 229 12 100 chr17 46962652 46962822 -38475658 - HAL1 LINE L1 -317 2190 2036 227 250 0 0 chr17 46962875 46962939 -38475541 + L1MC4 LINE L1 7979 8042 0 436 311 161 8 chr17 46963217 46963477 -38475003 - HAL1 LINE L1 -629 1878 1579 610 294 53 4 chr17 46963507 46963735 -38474745 + L1M4 LINE L1 4745 4983 -1163 567 259 9 31 chr17 46963744 46963968 -38474512 + L1MC4 LINE L1 7685 7903 -139 758 305 36 20 chr17 46964421 46964670 -38473810 + MIR SINE MIR 9 261 -1 31 26 0 0 chr17 46965370 46965408 -38473072 + AT_rich Low_complexity Low_complexity 1 38 0 1428 222 73 110 chr17 46965436 46965909 -38472571 - L1MEc LINE L1 -2500 3715 3226 256 111 0 0 chr17 46965909 46965945 -38472535 - U2 snRNA snRNA -152 36 1 1428 222 73 110 chr17 46965945 46965976 -38472504 - L1MEc LINE L1 -2989 3226 3195 1381 163 37 7 chr17 46965976 46966271 -38472209 - L1MA4 LINE L1 -1 6299 5996 1428 222 73 110 chr17 46966271 46966962 -38471518 - L1MEc LINE L1 -3020 3195 2529 1007 151 0 0 chr17 46966982 46967128 -38471352 + AluJb SINE Alu 1 146 -166 2362 87 3 3 chr17 46967128 46967426 -38471054 + AluSp SINE Alu 1 298 -15 2615 177 60 66 chr17 46967656 46968221 -38470259 - L1MD3 LINE L1 -3 7992 7314 413 232 36 9 chr17 46968221 46968333 -38470147 - MLT1F1 LTR MaLR -452 115 1 2615 177 60 66 chr17 46968333 46968568 -38469912 - L1MD3 LINE L1 -681 7314 7079 232 306 16 0 chr17 46968575 46968699 -38469781 - L1MEc LINE L1 -4104 2292 2167 4935 172 34 5 chr17 46968885 46970317 -38468163 + L1P5 LINE L1 4136 5608 -543 * 10011 191 33 12 chr17 46970315 46973680 -38464800 - L1PBa LINE L1 -1698 5164 1724 42 0 0 0 chr17 46974225 46974267 -38464213 + AT_rich Low_complexity Low_complexity 1 42 0 475 139 20 20 chr17 46975099 46975200 -38463280 + CT-rich Low_complexity Low_complexity 2 102 0 2352 96 0 3 chr17 46976131 46976434 -38462046 - AluSg SINE Alu -8 302 1 327 244 23 0 chr17 46976848 46976934 -38461546 + MER68 LTR ERV1 73 160 -402 507 363 94 33 chr17 46977037 46977528 -38460952 - L2 LINE L2 -2458 856 336 26 50 0 0 chr17 46977666 46977706 -38460774 + AT_rich Low_complexity Low_complexity 1 40 0 461 306 124 29 chr17 46977707 46977916 -38460564 - MIR SINE MIR -11 251 23 332 259 119 65 chr17 46978780 46978965 -38459515 + MIR SINE MIR 57 251 -11 241 444 0 0 chr17 46979173 46979288 -38459192 - L3 LINE CR1 -35 1542 1428 732 292 26 30 chr17 46979581 46979920 -38458560 - L1MC4a LINE L1 -1938 5853 5516 730 308 83 44 chr17 46980035 46980593 -38457887 - L1MC4a LINE L1 -2694 3435 2846 2098 87 18 0 chr17 46980593 46980896 -38457584 - AluSg SINE Alu 0 308 1 730 308 83 44 chr17 46980896 46980976 -38457504 - L1MC4a LINE L1 -3283 2846 2771 289 276 198 66 chr17 46981129 46981386 -38457094 - L3 LINE CR1 -137 1440 1150 274 188 0 0 chr17 46981880 46981928 -38456552 + Charlie5 DNA MER1_type 162 209 -2403 1979 154 3 6 chr17 46982859 46983170 -38455310 + AluSx SINE Alu 1 310 -2 966 153 32 42 chr17 46983205 46983394 -38455086 + MER20 DNA MER1_type 33 219 0 304 353 179 16 chr17 46984283 46984535 -38453945 + L2 LINE L2 2683 2975 -339 2376 148 33 25 chr17 46984552 46984945 -38453535 - MSTD LTR MaLR 0 396 1 1817 186 68 0 chr17 46984945 46985315 -38453165 - MSTD-int LTR MaLR 0 1735 1341 259 292 42 21 chr17 46985463 46985559 -38452921 + L2 LINE L2 3134 3231 -41 2054 136 3 10 chr17 46986300 46986609 -38451871 + AluSx SINE Alu 1 307 -5 590 243 36 153 chr17 46986670 46986892 -38451588 + MER91A DNA MER1_type 1 196 0 601 338 85 37 chr17 46987987 46988656 -38449824 - L1MC4a LINE L1 -5416 703 3 291 215 0 0 chr17 46988724 46988789 -38449691 + (TG)n Simple_repeat Simple_repeat 2 66 0 254 288 81 27 chr17 46988808 46988919 -38449561 + MIR SINE MIR 31 147 -115 825 51 0 0 chr17 46988922 46989020 -38449460 + AluY SINE Alu 201 298 -13 362 286 9 9 chr17 46989030 46989142 -38449338 + MIR SINE MIR 151 262 0 1194 51 0 13 chr17 46989478 46989635 -38448845 + L1PA3 LINE L1 5743 5897 -258 655 150 7 71 chr17 46989735 46989820 -38448660 - L1M4 LINE L1 -2215 3931 3857 2102 116 23 0 chr17 46989820 46990121 -38448359 - AluSx SINE Alu -4 308 1 655 150 7 71 chr17 46990121 46990175 -38448305 - L1M4 LINE L1 -2289 3857 3801 * 1479 265 107 21 chr17 46990170 46990395 -38448085 - HAL1 LINE L1 -309 2198 1994 2114 126 7 0 chr17 46990395 46990689 -38447791 - AluSg SINE Alu -13 297 2 1479 265 107 21 chr17 46990689 46990823 -38447657 - HAL1 LINE L1 -513 1994 1873 1864 60 0 0 chr17 46990823 46991040 -38447440 - AluSg/x SINE Alu -12 298 82 1479 265 107 21 chr17 46991040 46991286 -38447194 - HAL1 LINE L1 -634 1873 1540 1664 161 11 28 chr17 46991291 46991576 -38446904 + AluJb SINE Alu 3 282 -30 240 35 0 0 chr17 46991578 46991607 -38446873 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1867 100 0 0 chr17 46991641 46991882 -38446598 - AluSg SINE Alu -6 304 64 1689 116 0 28 chr17 46991983 46992234 -38446246 + AluSg SINE Alu 55 298 -12 825 172 0 14 chr17 46992305 46992450 -38446030 - FLAM_C SINE Alu 0 143 1 554 259 48 83 chr17 46992464 46993021 -38445459 - L1MCc LINE L1 -4862 2069 1494 2139 144 0 0 chr17 46993021 46993333 -38445147 - AluSx SINE Alu 0 312 1 1602 165 23 0 chr17 46993336 46993602 -38444878 - AluJb SINE Alu -18 294 23 554 259 48 83 chr17 46993602 46993622 -38444858 - L1MCc LINE L1 -5439 1492 1317 1371 174 13 0 chr17 46993716 46993952 -38444528 - L1MB4 LINE L1 -7 6173 5935 1784 136 30 56 chr17 46993954 46994116 -38444364 + MLT1A1 LTR MaLR 1 151 -214 2560 61 0 0 chr17 46994116 46994409 -38444071 + AluSc SINE Alu 3 295 -14 1784 136 30 56 chr17 46994409 46994585 -38443895 + MLT1A1 LTR MaLR 151 330 -35 967 244 56 8 chr17 46995103 46995369 -38443111 - L1ME1 LINE L1 -6 6160 5882 438 20 0 0 chr17 46995554 46995605 -38442875 + (TG)n Simple_repeat Simple_repeat 2 52 0 270 128 21 0 chr17 46995879 46995926 -38442554 - L1MA6 LINE L1 -64 6236 6189 1480 107 33 34 chr17 46995926 46996198 -38442282 - MER4B LTR ERV1 0 610 339 306 0 0 0 chr17 46996198 46996232 -38442248 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1480 107 33 34 chr17 46996232 46996356 -38442124 - MER4B LTR ERV1 -271 339 1 380 43 0 0 chr17 46996356 46996402 -38442078 - L1MA6 LINE L1 -108 6192 6147 1148 147 71 9 chr17 46996430 46996654 -38441826 - L1MA8 LINE L1 -4 6287 6050 2490 205 69 76 chr17 46996656 46996819 -38441661 - L1M4 LINE L1 -2391 3755 3592 2316 120 67 3 chr17 46996819 46997161 -38441319 - THE1B LTR MaLR 0 364 1 2490 205 69 76 chr17 46997161 46997942 -38440538 - L1M4 LINE L1 -2554 3592 2816 1638 183 7 13 chr17 46997942 46998243 -38440237 - AluJo SINE Alu -13 299 1 2490 205 69 76 chr17 46998243 46998369 -38440111 - L1M4 LINE L1 -3330 2816 2691 785 120 0 0 chr17 46998369 46998477 -38440003 + AluSg/x SINE Alu 190 297 -13 1342 194 16 68 chr17 46999375 46999685 -38438795 + AluJo SINE Alu 1 294 -8 1727 186 7 10 chr17 46999971 47000266 -38438214 + AluJb SINE Alu 1 294 -18 441 36 0 0 chr17 47000817 47000872 -38437608 + (TG)n Simple_repeat Simple_repeat 2 56 0 1868 153 3 17 chr17 47001775 47002075 -38436405 + AluSx SINE Alu 1 296 -16 1261 106 6 0 chr17 47002075 47002245 -38436235 + AluSg/x SINE Alu 134 304 -8 722 90 0 0 chr17 47002251 47002340 -38436140 + AluY SINE Alu 2 90 -221 1194 63 0 0 chr17 47002340 47002483 -38435997 + AluSg/x SINE Alu 156 298 -14 317 80 0 20 chr17 47002731 47002781 -38435699 + (TA)n Simple_repeat Simple_repeat 2 50 0 738 200 8 0 chr17 47003050 47003175 -38435305 + FLAM_C SINE Alu 2 127 -16 1917 154 0 13 chr17 47003179 47003477 -38435003 + AluSx SINE Alu 1 294 -18 1671 108 0 9 chr17 47003497 47003728 -38434752 + L1PB1 LINE L1 5923 6151 0 287 388 0 0 chr17 47004203 47004288 -38434192 + L2 LINE L2 3185 3269 -3 1826 169 0 17 chr17 47004428 47004730 -38433750 - AluJo SINE Alu -15 297 1 1528 180 9 38 chr17 47004745 47005061 -38433419 - AluJb SINE Alu 0 312 6 309 218 99 56 chr17 47005130 47005272 -38433208 + L1 LINE L1 4450 4597 -1549 425 315 59 11 chr17 47005351 47005621 -38432859 + L1ME LINE L1 4735 5017 -1129 262 139 0 0 chr17 47005691 47005727 -38432753 + Alu SINE Alu 1 36 -266 233 129 0 0 chr17 47005729 47005760 -38432720 + Alu SINE Alu 6 36 -265 1514 195 7 11 chr17 47005762 47006034 -38432446 + AluJb SINE Alu 6 276 -36 517 235 88 49 chr17 47006340 47006544 -38431936 + L1MC4 LINE L1 6444 6655 -1340 1201 137 0 0 chr17 47006572 47006740 -38431740 - AluSg/x SINE Alu -11 299 132 2140 119 0 3 chr17 47006740 47007033 -38431447 - AluSg SINE Alu -18 292 1 1899 130 17 20 chr17 47007035 47007334 -38431146 - AluSx SINE Alu -14 298 1 3546 228 124 15 chr17 47007349 47007405 -38431075 + L1MC4 LINE L1 6638 6687 -1355 351 0 0 0 chr17 47007405 47007444 -38431036 + (CA)n Simple_repeat Simple_repeat 2 40 0 3546 228 124 15 chr17 47007444 47008285 -38430195 + L1MC4 LINE L1 6687 7781 -261 1866 161 3 7 chr17 47008285 47008595 -38429885 + AluSx SINE Alu 1 309 -3 3546 228 124 15 chr17 47008595 47008890 -38429590 + L1MC4 LINE L1 7781 8042 0 27 0 0 0 chr17 47009177 47009204 -38429276 + AT_rich Low_complexity Low_complexity 1 27 0 323 313 116 36 chr17 47009256 47009480 -38429000 + L1ME LINE L1 5385 5626 -495 1383 101 0 6 chr17 47009735 47009961 -38428519 + AluSg/x SINE Alu 103 327 0 1704 79 5 0 chr17 47010574 47010789 -38427691 - AluY SINE Alu -13 298 83 947 78 0 0 chr17 47011476 47011592 -38426888 - AluSp/q SINE Alu -24 289 174 2202 123 3 0 chr17 47011742 47012044 -38426436 - AluSq SINE Alu -10 303 1 443 269 128 46 chr17 47012050 47012303 -38426177 + L1MCc LINE L1 1290 1521 -5410 1728 171 28 0 chr17 47012303 47012590 -38425890 + AluJo SINE Alu 1 295 -17 443 269 128 46 chr17 47012590 47012956 -38425524 + L1MCc LINE L1 1521 2057 -4874 352 301 86 77 chr17 47012994 47013335 -38425145 + L1MCc LINE L1 2391 2738 -4384 2052 145 0 0 chr17 47013335 47013632 -38424848 + AluSx SINE Alu 1 297 -15 352 301 86 77 chr17 47013632 47013718 -38424762 + L1MCc LINE L1 2738 2822 -4300 286 257 0 0 chr17 47013943 47014017 -38424463 + L1MCc LINE L1 3692 3765 -3176 1585 143 0 23 chr17 47014052 47014311 -38424169 + AluJb SINE Alu 60 312 0 583 256 52 91 chr17 47014319 47014641 -38423839 + L1MCc LINE L1 3757 4090 -2851 2339 84 0 3 chr17 47014641 47014938 -38423542 + AluSq SINE Alu 1 296 -17 583 256 52 91 chr17 47014938 47015018 -38423462 + L1MCc LINE L1 4090 4172 -2769 1982 121 4 4 chr17 47015018 47015298 -38423182 + AluSx SINE Alu 1 280 -32 252 0 0 0 chr17 47015300 47015328 -38423152 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 583 256 52 91 chr17 47015328 47015417 -38423063 + L1MCc LINE L1 4173 4233 -2708 1702 159 23 39 chr17 47015430 47015738 -38422742 + AluJo SINE Alu 1 303 -9 183 129 0 0 chr17 47015738 47015769 -38422711 + (GA)n Simple_repeat Simple_repeat 1 31 0 213 39 0 0 chr17 47015772 47015798 -38422682 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 2451 54 10 3 chr17 47015994 47016292 -38422188 - AluY SINE Alu -11 300 1 775 225 6 19 chr17 47016537 47016697 -38421783 + FRAM SINE Alu 2 159 -17 1374 156 184 16 chr17 47016944 47017036 -38421444 + AluSx SINE Alu 1 76 -236 1295 159 183 16 chr17 47017036 47017293 -38421187 + AluSx SINE Alu 1 300 -12 1374 156 184 16 chr17 47017293 47017456 -38421024 + AluSx SINE Alu 76 299 -13 1885 142 0 10 chr17 47017554 47017843 -38420637 + AluSx SINE Alu 1 286 -26 937 286 80 11 chr17 47017902 47018488 -38419992 + L1MEc LINE L1 1034 1992 -4223 2413 91 0 0 chr17 47019232 47019541 -38418939 - AluSx SINE Alu -3 309 1 311 338 45 26 chr17 47019678 47020060 -38418420 + L1M4 LINE L1 4794 5182 -964 350 286 58 74 chr17 47020075 47020400 -38418080 + L1M4 LINE L1 4496 4815 -1331 707 161 0 91 chr17 47020400 47020471 -38418009 + AluJo SINE Alu 7 60 -252 2066 112 38 0 chr17 47020471 47020758 -38417722 - AluSg SINE Alu -12 298 1 707 161 0 91 chr17 47020758 47020829 -38417651 + AluJo SINE Alu 60 136 -176 1581 173 0 68 chr17 47020829 47021152 -38417328 + AluJo SINE Alu 1 301 -11 2978 89 11 0 chr17 47021192 47021563 -38416917 + THE1C LTR MaLR 1 375 0 253 59 29 44 chr17 47021579 47021647 -38416833 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 306 294 132 82 chr17 47021699 47021997 -38416483 + MLT1J LTR MaLR 1 323 -188 2301 116 3 0 chr17 47021997 47022308 -38416172 + AluSx SINE Alu 1 312 0 306 294 132 82 chr17 47022308 47022387 -38416093 + MLT1J LTR MaLR 323 397 -114 237 33 0 0 chr17 47022540 47022570 -38415910 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1681 147 107 0 chr17 47022590 47022862 -38415618 + AluSx SINE Alu 1 301 -11 1277 161 14 5 chr17 47022876 47023093 -38415387 + AluJb SINE Alu 87 305 -7 249 163 20 0 chr17 47023093 47023142 -38415338 + Alu SINE Alu 86 135 -167 1463 195 10 52 chr17 47023351 47023658 -38414822 + AluJo SINE Alu 1 294 -18 2304 105 0 6 chr17 47023661 47023974 -38414506 + AluSx SINE Alu 1 311 -1 2316 81 20 0 chr17 47024575 47024872 -38413608 - AluY SINE Alu -7 304 2 2128 99 41 3 chr17 47025346 47025639 -38412841 + AluSg SINE Alu 1 304 -6 200 291 89 0 chr17 47025659 47025738 -38412742 + MIR SINE MIR 109 194 -68 1559 164 49 7 chr17 47026428 47026714 -38411766 - AluJb SINE Alu -14 298 1 1982 67 97 0 chr17 47027721 47027988 -38410492 + AluSx SINE Alu 1 293 -19 1018 132 0 6 chr17 47028035 47028194 -38410286 + AluSc SINE Alu 135 292 -17 494 297 8 0 chr17 47028275 47028393 -38410087 - MIR SINE MIR -134 128 10 1343 183 13 73 chr17 47028754 47028918 -38409562 - L1M3 LINE L1 -425 5991 5819 1323 191 105 11 chr17 47028918 47029185 -38409295 + AluJo SINE Alu 1 292 -20 1343 183 13 73 chr17 47029185 47029301 -38409179 - L1M3 LINE L1 -597 5819 5728 2456 87 3 0 chr17 47029301 47029610 -38408870 - AluY SINE Alu -1 310 1 1343 183 13 73 chr17 47029610 47029628 -38408852 - L1M3 LINE L1 -688 5728 5710 270 0 0 0 chr17 47029639 47029669 -38408811 + (TA)n Simple_repeat Simple_repeat 2 31 0 852 145 0 0 chr17 47029670 47029787 -38408693 - FLAM_C SINE Alu -26 117 1 1974 173 42 38 chr17 47029790 47029930 -38408550 - L1M3 LINE L1 -701 5718 5580 2263 109 0 0 chr17 47029930 47030224 -38408256 - AluSx SINE Alu -18 294 1 1974 173 42 38 chr17 47030224 47030363 -38408117 - L1M3 LINE L1 -839 5580 5443 2262 104 3 0 chr17 47030363 47030662 -38407818 - AluSp SINE Alu -10 303 4 1974 173 42 38 chr17 47030662 47030997 -38407483 - L1M3 LINE L1 -976 5443 5117 716 91 0 0 chr17 47030998 47031086 -38407394 - AluS SINE Alu -217 96 9 273 230 40 0 chr17 47031150 47031224 -38407256 - L1M3 LINE L1 -4236 2148 2072 1758 157 3 28 chr17 47031499 47031786 -38406694 - AluSx SINE Alu -32 280 1 37 23 0 0 chr17 47031862 47031906 -38406574 + AT_rich Low_complexity Low_complexity 1 44 0 2298 89 7 3 chr17 47032379 47032682 -38405798 + AluSx SINE Alu 1 304 -8 1193 147 4 84 chr17 47032758 47032803 -38405677 + MER33 DNA MER1_type 9 56 -2529 1882 174 0 3 chr17 47032803 47033108 -38405372 + AluJo SINE Alu 1 304 -8 1193 147 4 84 chr17 47033108 47033313 -38405167 + MER33 DNA MER1_type 56 239 -85 375 125 0 0 chr17 47033306 47033362 -38405118 + AluSp SINE Alu 134 189 -114 * 1114 107 0 0 chr17 47033380 47033530 -38404950 + AluSq/x SINE Alu 1 150 -162 195 42 0 0 chr17 47033631 47033655 -38404825 + (CTAA)n Simple_repeat Simple_repeat 1 24 0 2170 130 0 0 chr17 47034019 47034319 -38404161 - AluSx SINE Alu -12 300 1 2405 72 7 0 chr17 47034423 47034729 -38403751 - AluY SINE Alu -3 308 1 2470 84 3 0 chr17 47035079 47035388 -38403092 - AluSx SINE Alu -2 310 1 2177 112 3 22 chr17 47035395 47035709 -38402771 - AluSx SINE Alu -4 308 1 2450 82 0 0 chr17 47035717 47036023 -38402457 - AluSg SINE Alu -4 306 1 287 152 0 0 chr17 47036390 47036436 -38402044 - AluJ/FLAM SINE Alu -219 83 38 2271 103 3 0 chr17 47036871 47037173 -38401307 - AluSp SINE Alu -10 303 1 2301 89 0 13 chr17 47037459 47037772 -38400708 + AluSp SINE Alu 1 309 -4 2120 98 7 10 chr17 47037981 47038286 -38400194 - AluSc SINE Alu -5 304 1 2223 97 0 7 chr17 47038531 47038841 -38399639 - AluSp SINE Alu 0 313 6 2267 97 0 3 chr17 47038853 47039163 -38399317 - AluSq SINE Alu -4 309 1 800 165 0 0 chr17 47039204 47039331 -38399149 + FLAM_C SINE Alu 12 138 -5 27 49 0 0 chr17 47039336 47039377 -38399103 + AT_rich Low_complexity Low_complexity 1 41 0 546 247 80 0 chr17 47039529 47039691 -38398789 - L2 LINE L2 -759 2555 2381 867 142 0 39 chr17 47039691 47039846 -38398634 - FRAM SINE Alu -18 158 10 198 295 0 16 chr17 47040117 47040178 -38398302 - MIR3 SINE MIR 0 208 149 267 161 0 0 chr17 47040683 47040739 -38397741 + T-rich Low_complexity Low_complexity 1 56 0 1057 81 0 0 chr17 47040739 47040875 -38397605 - AluSq/x SINE Alu -176 136 1 765 255 46 19 chr17 47040883 47040933 -38397547 - MIR SINE MIR 0 262 215 2250 92 3 16 chr17 47040933 47041250 -38397230 - AluSq SINE Alu 0 313 1 765 255 46 19 chr17 47041250 47041415 -38397065 - MIR SINE MIR -47 215 41 2274 57 0 0 chr17 47041467 47041774 -38396706 - AluY SINE Alu 0 307 1 1943 110 7 7 chr17 47042233 47042523 -38395957 + AluSg SINE Alu 1 290 -20 624 250 0 0 chr17 47042715 47042847 -38395633 - FLAM_C SINE Alu -10 133 2 311 239 15 8 chr17 47042937 47043038 -38395442 - MIR3 SINE MIR -1 207 106 735 147 17 0 chr17 47043434 47043550 -38394930 + FLAM_A SINE Alu 12 129 -13 1976 89 0 86 chr17 47043658 47043973 -38394507 - AluSg SINE Alu -22 288 1 1153 125 0 0 chr17 47043980 47044148 -38394332 - AluSg/x SINE Alu -11 299 132 1792 85 16 4 chr17 47044148 47044406 -38394074 - AluY SINE Alu -11 300 40 2169 78 14 3 chr17 47044508 47044802 -38393678 - AluSp SINE Alu -16 297 1 230 281 78 135 chr17 47044931 47045123 -38393357 + MIR SINE MIR 64 244 -18 191 277 40 89 chr17 47046059 47046160 -38392320 - MIR SINE MIR -64 144 49 1996 111 3 10 chr17 47046260 47046549 -38391931 - AluSc SINE Alu -22 287 1 2013 95 7 11 chr17 47046552 47046880 -38391600 - AluSx SINE Alu 0 327 1 1913 137 0 7 chr17 47046885 47047178 -38391302 - AluSg SINE Alu -19 291 1 2094 108 3 13 chr17 47047179 47047486 -38390994 - AluSx SINE Alu -8 304 1 882 139 0 7 chr17 47047486 47047623 -38390857 - AluSq/x SINE Alu -176 136 1 553 101 0 0 chr17 47047638 47047717 -38390763 - Alu SINE Alu 0 309 231 935 200 0 6 chr17 47047819 47047999 -38390481 + AluJb SINE Alu 121 299 -13 465 264 202 67 chr17 47048026 47048160 -38390320 + L2 LINE L2 2876 2991 -322 1939 135 0 0 chr17 47048160 47048448 -38390032 - AluJb SINE Alu -16 296 9 465 264 202 67 chr17 47048448 47048466 -38390014 + L2 LINE L2 2991 3005 -308 2211 94 10 3 chr17 47048466 47048765 -38389715 - AluSc SINE Alu -8 301 1 465 264 202 67 chr17 47048765 47048997 -38389483 + L2 LINE L2 3005 3313 0 32 75 0 0 chr17 47049290 47049357 -38389123 + AT_rich Low_complexity Low_complexity 1 67 0 1867 68 4 24 chr17 47049723 47049972 -38388508 - AluSp SINE Alu -40 273 30 885 62 0 9 chr17 47049993 47050105 -38388375 - AluY SINE Alu -179 132 22 1569 177 3 50 chr17 47050105 47050279 -38388201 - AluJb SINE Alu -5 307 153 2163 114 3 0 chr17 47050279 47050586 -38387894 - AluSx SINE Alu -4 308 1 1569 177 3 50 chr17 47050586 47050733 -38387747 - AluJb SINE Alu -159 153 1 350 146 0 0 chr17 47050734 47050789 -38387691 - MER53 DNA DNA -134 55 1 1203 103 0 0 chr17 47050810 47050975 -38387505 - AluSq SINE Alu -14 299 135 2134 88 0 50 chr17 47050975 47051148 -38387332 - AluSx SINE Alu -7 305 154 1791 94 0 114 chr17 47051148 47051489 -38386991 - AluY SINE Alu -9 302 1 2134 88 0 50 chr17 47051489 47051634 -38386846 - AluSx SINE Alu -158 154 3 2342 64 0 7 chr17 47052310 47052607 -38385873 + AluSc SINE Alu 1 295 -14 2147 119 0 0 chr17 47052613 47052916 -38385564 + AluSg SINE Alu 1 303 -7 183 190 138 35 chr17 47053873 47053931 -38384549 + L2 LINE L2 3250 3313 0 341 295 0 36 chr17 47054048 47054160 -38384320 + MIR3 SINE MIR 3 110 -98 2084 89 25 0 chr17 47054216 47054496 -38383984 + AluSg SINE Alu 1 287 -23 2086 124 3 3 chr17 47054704 47055010 -38383470 + AluSx SINE Alu 1 306 -6 1052 105 7 0 chr17 47055248 47055400 -38383080 + L1PB3 LINE L1 6002 6154 0 1093 46 0 0 chr17 47055421 47055551 -38382929 + AluY SINE Alu 1 130 -181 2302 86 0 10 chr17 47057255 47057568 -38380912 - AluSg SINE Alu 0 310 1 540 227 151 79 chr17 47058033 47058158 -38380322 + MER102b DNA MER1_type 38 153 -1275 2509 52 3 0 chr17 47058158 47058464 -38380016 + AluSp SINE Alu 1 307 -6 540 227 151 79 chr17 47058464 47058616 -38379864 + MER102b DNA MER1_type 153 335 -6 2165 93 0 29 chr17 47058750 47059063 -38379417 + AluSg SINE Alu 1 304 -6 787 114 8 24 chr17 47059207 47059330 -38379150 - AluSp/q SINE Alu -11 302 182 681 293 90 4 chr17 47059434 47059455 -38379025 + L3 LINE CR1 1247 1265 -312 373 184 26 0 chr17 47059455 47059531 -38378949 + MER116 DNA Mariner 3 80 0 681 293 90 4 chr17 47059531 47059765 -38378715 + L3 LINE CR1 1265 1524 -53 2248 97 0 0 chr17 47059928 47060236 -38378244 - AluSc SINE Alu -1 308 1 30 0 0 0 chr17 47060238 47060268 -38378212 + AT_rich Low_complexity Low_complexity 1 30 0 2057 109 3 3 chr17 47060268 47060561 -38377919 - AluSc SINE Alu -16 293 1 318 299 61 27 chr17 47060724 47060871 -38377609 + L2 LINE L2 3160 3311 -2 29 60 0 0 chr17 47060912 47060962 -38377518 + AT_rich Low_complexity Low_complexity 1 50 0 358 197 156 8 chr17 47060964 47061086 -38377394 + MER112 DNA MER1_type 119 258 -2 1245 139 14 28 chr17 47061321 47061537 -38376943 + AluJb SINE Alu 88 300 -12 710 189 15 8 chr17 47061551 47061683 -38376797 + FLAM_A SINE Alu 1 133 0 1883 100 6 84 chr17 47061705 47062025 -38376455 + AluSx SINE Alu 1 295 -17 226 29 0 0 chr17 47062538 47062572 -38375908 - Alu SINE Alu -4 295 262 1603 107 49 4 chr17 47062672 47062916 -38375564 + AluSx SINE Alu 42 296 -16 2230 88 0 0 chr17 47062984 47063279 -38375201 + AluY SINE Alu 1 295 -16 343 231 86 67 chr17 47063473 47063523 -38374957 + L1M4 LINE L1 5118 5166 -980 2165 119 0 0 chr17 47063523 47063835 -38374645 + AluSx SINE Alu 1 312 0 343 231 86 67 chr17 47063835 47064058 -38374422 + L1M4 LINE L1 5166 5395 -751 303 71 0 0 chr17 47064205 47064247 -38374233 + (CA)n Simple_repeat Simple_repeat 2 43 0 3391 161 40 54 chr17 47064357 47065289 -38373191 - MER21A LTR ERV1 -18 913 73 338 189 28 26 chr17 47065389 47065471 -38373009 - MER21A LTR ERV1 -780 83 1 918 135 0 0 chr17 47065491 47065624 -38372856 - FLAM_C SINE Alu 0 133 1 519 164 10 67 chr17 47066967 47067071 -38371409 + FLAM_C SINE Alu 21 118 -25 264 30 0 0 chr17 47067078 47067111 -38371369 + (CAAGA)n Simple_repeat Simple_repeat 3 35 0 201 141 47 31 chr17 47067397 47067461 -38371019 + A-rich Low_complexity Low_complexity 4 68 0 1651 169 18 11 chr17 47067513 47067792 -38370688 + AluJo SINE Alu 1 281 -31 1178 334 0 93 chr17 47067793 47068125 -38370355 - AluSx SINE Alu 0 302 2 2144 99 7 3 chr17 47068157 47068459 -38370021 + AluSx SINE Alu 1 303 -9 680 180 8 8 chr17 47068487 47068609 -38369871 + FLAM_A SINE Alu 11 132 -10 1358 234 124 73 chr17 47068609 47069317 -38369163 - L2 LINE L2 -1119 2195 1452 237 312 96 49 chr17 47069366 47069492 -38368988 - MIR3 SINE MIR -54 154 54 920 212 156 75 chr17 47069570 47069942 -38368538 - L1ME2 LINE L1 -10 6154 5753 1634 136 56 83 chr17 47070009 47070369 -38368111 - L1MB7 LINE L1 -16 6168 5819 2104 88 0 27 chr17 47070369 47070664 -38367816 - AluSc SINE Alu -20 289 3 342 25 0 0 chr17 47070673 47070713 -38367767 - MLT1A1 LTR MaLR -214 151 112 1409 85 15 0 chr17 47070835 47071035 -38367445 + AluSg/x SINE Alu 88 290 -20 1962 127 3 3 chr17 47071045 47071345 -38367135 + AluSx SINE Alu 1 300 -12 841 144 40 17 chr17 47071363 47071537 -38366943 + AluSg/x SINE Alu 118 295 -15 295 288 147 24 chr17 47071540 47071710 -38366770 + L1ME1 LINE L1 5956 6146 -20 376 245 56 141 chr17 47071804 47071961 -38366519 + L1M4 LINE L1 2948 3117 -3029 725 100 0 0 chr17 47071961 47072061 -38366419 - HY3 scRNA scRNA -1 100 1 376 245 56 141 chr17 47072061 47072104 -38366376 + L1M4 LINE L1 3117 3162 -2984 2057 118 3 0 chr17 47072104 47072393 -38366087 + AluSx SINE Alu 9 298 -14 376 245 56 141 chr17 47072393 47072532 -38365948 + L1M4 LINE L1 3162 3256 -2890 1681 116 75 51 chr17 47072532 47072732 -38365748 + AluSg SINE Alu 1 212 -98 5273 51 8 11 chr17 47072732 47073398 -38365082 + SVA Other Other 723 1386 0 1681 116 75 51 chr17 47073398 47073491 -38364989 + AluSg SINE Alu 212 301 -9 376 245 56 141 chr17 47073491 47073524 -38364956 + L1M4 LINE L1 3256 3290 -2856 2230 99 3 0 chr17 47073827 47074129 -38364351 + AluSp SINE Alu 1 303 -10 2265 172 119 98 chr17 47074406 47074814 -38363666 + Tigger7 DNA MER2_type 5 403 -2184 1540 155 35 14 chr17 47074814 47075104 -38363376 + AluJo SINE Alu 1 296 -16 2265 172 119 98 chr17 47075104 47075135 -38363345 + Tigger7 DNA MER2_type 403 432 -2155 2181 98 3 0 chr17 47075135 47075430 -38363050 + AluSp SINE Alu 1 296 -17 2072 86 18 0 chr17 47075436 47075715 -38362765 + AluY SINE Alu 12 295 -16 2265 172 119 98 chr17 47075715 47075953 -38362527 + Tigger7 DNA MER2_type 436 2587 0 222 267 68 81 chr17 47076000 47076091 -38362389 - L2 LINE L2 -5 3308 3218 2097 94 13 20 chr17 47076091 47076390 -38362090 - AluSq SINE Alu -16 297 1 222 267 68 81 chr17 47076390 47076459 -38362021 - L2 LINE L2 -95 3218 3150 460 244 53 23 chr17 47076480 47076611 -38361869 + MIR SINE MIR 8 142 -120 1605 180 37 0 chr17 47077212 47077512 -38360968 + AluJo SINE Alu 1 311 -1 1636 150 48 0 chr17 47077717 47077990 -38360490 + AluSq SINE Alu 1 286 -27 25 0 0 0 chr17 47077990 47078015 -38360465 + AT_rich Low_complexity Low_complexity 1 25 0 22 56 0 0 chr17 47078082 47078118 -38360362 + AT_rich Low_complexity Low_complexity 1 36 0 1761 122 0 7 chr17 47078547 47078825 -38359655 + AluSq SINE Alu 1 276 -37 206 286 54 71 chr17 47079827 47079939 -38358541 + MIR SINE MIR 18 127 -81 1411 179 29 15 chr17 47080136 47080410 -38358070 + AluJb SINE Alu 1 278 -34 2047 97 4 4 chr17 47080903 47081182 -38357298 + AluSp SINE Alu 1 279 -34 1929 99 57 0 chr17 47082223 47082506 -38355974 + AluSx SINE Alu 2 300 -12 261 119 0 0 chr17 47083457 47083499 -38354981 + (TA)n Simple_repeat Simple_repeat 1 42 0 2122 66 0 28 chr17 47083638 47083962 -38354518 - AluSg SINE Alu 0 316 1 2577 30 0 3 chr17 47084071 47084376 -38354104 - AluY SINE Alu -7 304 1 21 0 0 0 chr17 47084712 47084733 -38353747 + GC_rich Low_complexity Low_complexity 1 21 0 30 0 0 0 chr17 47084780 47084810 -38353670 + GC_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 47084860 47084892 -38353588 + (TCCCC)n Simple_repeat Simple_repeat 1 32 0 217 228 11 43 chr17 47085040 47085132 -38353348 + CT-rich Low_complexity Low_complexity 1 89 0 26 82 0 0 chr17 47085346 47085407 -38353073 + GC_rich Low_complexity Low_complexity 1 61 0 477 115 0 0 chr17 47085432 47085510 -38352970 + (CTGGGG)n Simple_repeat Simple_repeat 6 83 0 2220 61 19 29 chr17 47086093 47086406 -38352074 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr17 47087505 47087535 -38350945 + AT_rich Low_complexity Low_complexity 1 30 0 2204 78 42 0 chr17 47087814 47088097 -38350383 - AluYa5 SINE Alu -15 296 2 277 100 0 0 chr17 47088434 47088474 -38350006 + (TTTG)n Simple_repeat Simple_repeat 2 172 0 2372 64 0 0 chr17 47088474 47088757 -38349723 - AluY SINE Alu -1 322 1 815 155 0 49 chr17 47088758 47088900 -38349580 - AluSq/x SINE Alu -177 136 2 877 213 0 0 chr17 47089066 47089265 -38349215 - AluSc SINE Alu 0 329 131 1974 139 30 0 chr17 47089265 47089568 -38348912 - AluSx SINE Alu 0 312 1 1524 176 52 38 chr17 47089570 47089860 -38348620 - AluJo SINE Alu -18 294 1 1816 157 7 14 chr17 47090123 47090410 -38348070 - AluJb SINE Alu -27 285 1 279 0 0 0 chr17 47090607 47090638 -38347842 + (TG)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr17 47090637 47090657 -38347823 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1715 150 20 17 chr17 47090708 47091002 -38347478 + AluJb SINE Alu 1 295 -17 1634 175 3 20 chr17 47091106 47091409 -38347071 + AluSx SINE Alu 1 298 -14 348 286 143 14 chr17 47091458 47091598 -38346882 + MIR3 SINE MIR 34 191 -17 2883 156 104 18 chr17 47091846 47092462 -38346018 - L1MB8 LINE L1 -5 6173 5505 2287 105 0 22 chr17 47092471 47092784 -38345696 - AluSx SINE Alu -6 306 1 2310 95 3 0 chr17 47092973 47093268 -38345212 - AluSp SINE Alu -17 296 1 1813 161 3 7 chr17 47094027 47094326 -38344154 + AluSx SINE Alu 1 298 -14 358 258 58 25 chr17 47094547 47094667 -38343813 + L1ME4a LINE L1 5294 5417 -2391 828 286 50 8 chr17 47094726 47095083 -38343397 + L1ME4a LINE L1 5534 5905 -216 310 206 82 41 chr17 47095121 47095218 -38343262 + L1ME4a LINE L1 5999 6099 -22 30 27 0 0 chr17 47095219 47095256 -38343224 + AT_rich Low_complexity Low_complexity 1 37 0 2437 53 0 0 chr17 47095325 47095632 -38342848 + AluY SINE Alu 1 307 0 21 36 0 0 chr17 47095741 47095769 -38342711 + AT_rich Low_complexity Low_complexity 1 28 0 988 141 0 0 chr17 47096021 47096163 -38342317 + FLAM_C SINE Alu 1 142 -1 298 294 0 0 chr17 47096164 47096249 -38342231 - MLT1I LTR MaLR -245 164 80 1039 238 93 84 chr17 47096259 47096663 -38341817 + HAL1 LINE L1 853 1252 -1255 2040 153 0 0 chr17 47096663 47096964 -38341516 - AluSx SINE Alu -11 301 1 1039 238 93 84 chr17 47096964 47097366 -38341114 + HAL1 LINE L1 1252 1666 -841 842 203 28 0 chr17 47097449 47097626 -38340854 + AluJo SINE Alu 121 302 -10 330 188 104 14 chr17 47097839 47097983 -38340497 + L1M4 LINE L1 2809 2965 -3181 925 248 16 66 chr17 47098418 47098491 -38339989 - MIR SINE MIR -32 230 155 1501 187 10 60 chr17 47098491 47098791 -38339689 - AluJo SINE Alu -22 290 6 925 248 16 66 chr17 47098791 47098959 -38339521 - MIR SINE MIR -107 155 1 260 273 18 27 chr17 47099154 47099264 -38339216 - L1MC4a LINE L1 -1884 5924 5816 2348 63 0 14 chr17 47099469 47099792 -38338688 - AluY SINE Alu 0 323 5 1390 125 10 10 chr17 47100196 47100396 -38338084 + AluSg/x SINE Alu 95 294 -16 21 0 0 0 chr17 47100475 47100496 -38337984 + AT_rich Low_complexity Low_complexity 1 21 0 30 77 0 0 chr17 47101310 47101375 -38337105 + AT_rich Low_complexity Low_complexity 1 65 0 344 233 52 9 chr17 47101690 47101806 -38336674 + MARNA DNA Mariner 269 389 -197 2126 126 13 0 chr17 47101812 47102114 -38336366 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr17 47102400 47102435 -38336045 + AT_rich Low_complexity Low_complexity 1 35 0 549 244 153 34 chr17 47102786 47102995 -38335485 + MIR SINE MIR 23 256 -6 306 0 0 0 chr17 47103819 47103853 -38334627 + (TG)n Simple_repeat Simple_repeat 2 35 0 183 156 0 0 chr17 47103853 47103885 -38334595 + (CATATA)n Simple_repeat Simple_repeat 4 35 0 306 277 40 10 chr17 47104295 47104396 -38334084 - HAL1b LINE L1 -739 609 506 1797 241 39 12 chr17 47104420 47104930 -38333550 + MER90 LTR ERV1 9 532 -43 340 302 50 96 chr17 47104951 47105252 -38333228 - HAL1b LINE L1 -854 494 208 231 36 0 0 chr17 47105572 47105600 -38332880 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2184 90 4 0 chr17 47105606 47105883 -38332597 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 47106207 47106237 -38332243 + AT_rich Low_complexity Low_complexity 1 30 0 187 250 103 0 chr17 47106799 47106867 -38331613 + MIR SINE MIR 182 256 -6 887 143 0 0 chr17 47106903 47107036 -38331444 - FLAM_C SINE Alu 0 133 1 2000 172 0 0 chr17 47107191 47107493 -38330987 + AluSx SINE Alu 1 302 -10 1738 191 0 30 chr17 47107521 47107825 -38330655 + AluJo SINE Alu 1 295 -17 2254 123 0 0 chr17 47107827 47108128 -38330352 + AluSx SINE Alu 1 301 -11 2264 99 0 0 chr17 47108816 47109110 -38329370 - AluY SINE Alu -17 294 1 189 0 0 0 chr17 47110298 47110319 -38328161 + (TA)n Simple_repeat Simple_repeat 1 21 0 2215 103 3 10 chr17 47112263 47112565 -38325915 + AluSq SINE Alu 1 300 -13 1389 183 3 106 chr17 47112908 47113230 -38325250 - AluSg1 SINE Alu -20 289 1 1609 186 3 35 chr17 47113263 47113548 -38324932 - AluJb SINE Alu -36 276 1 830 156 0 7 chr17 47114044 47114179 -38324301 + FRAM SINE Alu 12 145 -31 1249 145 0 0 chr17 47114227 47114399 -38324081 + AluSx SINE Alu 3 174 -138 328 130 0 0 chr17 47114405 47114459 -38324021 + AluSc SINE Alu 245 298 -1 2334 87 10 7 chr17 47115073 47115373 -38323107 + AluSp SINE Alu 1 301 -12 1353 117 0 113 chr17 47116667 47116740 -38321740 + MER46A DNA MER2_type 1 81 -2650 1694 57 26 18 chr17 47116740 47116967 -38321513 - L1PA6 LINE L1 0 6154 5926 1353 117 0 113 chr17 47116967 47117159 -38321321 + MER46A DNA MER2_type 81 236 0 1935 138 17 10 chr17 47117263 47117561 -38320919 + AluJo SINE Alu 1 300 -12 1582 136 14 31 chr17 47117568 47117855 -38320625 - Tigger3(Golem) DNA MER2_type 0 3029 2748 1126 169 0 11 chr17 47117866 47118049 -38320431 + AluJo SINE Alu 13 193 -119 1041 91 28 6 chr17 47118155 47118331 -38320149 - Tigger3(Golem) DNA MER2_type -359 2670 2491 2344 82 0 52 chr17 47118331 47118521 -38319959 - AluSp SINE Alu 0 313 115 501 32 0 0 chr17 47118521 47118584 -38319896 + (TTATG)n Simple_repeat Simple_repeat 2 64 0 2431 45 0 0 chr17 47118584 47118870 -38319610 - AluY SINE Alu -25 286 1 2217 111 0 3 chr17 47118872 47119169 -38319311 - AluSx SINE Alu -16 296 1 2344 82 0 52 chr17 47119169 47119304 -38319176 - AluSp SINE Alu -198 115 1 1860 160 0 17 chr17 47119499 47119639 -38318841 + AluJb SINE Alu 1 142 -170 2342 111 3 0 chr17 47119639 47119945 -38318535 + AluSx SINE Alu 1 307 -5 1860 160 0 17 chr17 47119945 47120097 -38318383 + AluJb SINE Alu 142 288 -24 407 226 6 77 chr17 47120649 47120704 -38317776 + L1M4 LINE L1 3796 3853 -2293 2251 121 0 0 chr17 47120704 47121001 -38317479 + AluSx SINE Alu 1 297 -15 407 226 6 77 chr17 47121001 47121113 -38317367 + L1M4 LINE L1 3853 3951 -2195 29 28 0 0 chr17 47121452 47121488 -38316992 + AT_rich Low_complexity Low_complexity 1 36 0 675 160 0 25 chr17 47121488 47121607 -38316873 - FLAM_C SINE Alu -17 116 1 1719 164 7 10 chr17 47122131 47122424 -38316056 + AluJo SINE Alu 1 292 -20 626 185 109 0 chr17 47122429 47122548 -38315932 + FLAM_C SINE Alu 1 132 -1 812 159 0 36 chr17 47122805 47122943 -38315537 + FLAM_C SINE Alu 1 133 0 2171 108 10 7 chr17 47123759 47124056 -38314424 - AluSg SINE Alu -12 298 1 1679 173 3 11 chr17 47124090 47124373 -38314107 + AluJb SINE Alu 1 281 -31 1924 132 7 46 chr17 47124879 47125183 -38313297 + AluSx SINE Alu 1 292 -20 2026 96 0 19 chr17 47126325 47126595 -38311885 + AluSg SINE Alu 35 299 -11 671 206 16 0 chr17 47126617 47126743 -38311737 - FLAM_A SINE Alu -5 128 1 26 0 0 0 chr17 47126753 47126779 -38311701 + AT_rich Low_complexity Low_complexity 1 26 0 22 56 0 0 chr17 47126942 47126978 -38311502 + AT_rich Low_complexity Low_complexity 1 36 0 2029 110 27 7 chr17 47127075 47127367 -38311113 + AluSx SINE Alu 2 299 -13 2012 96 4 0 chr17 47129817 47130077 -38308403 - AluSp SINE Alu -14 299 39 1954 113 57 0 chr17 47130397 47130680 -38307800 - AluSq SINE Alu -14 299 1 2199 122 3 0 chr17 47181285 47181597 -38256883 + AluSq SINE Alu 1 313 0 453 257 35 0 chr17 47182162 47182275 -38256205 - MIR3 SINE MIR -6 202 86 2314 109 3 3 chr17 47184081 47184394 -38254086 - AluSq SINE Alu 0 313 1 278 245 94 40 chr17 47184633 47184793 -38253687 - MIR SINE MIR -65 143 1 330 289 207 0 chr17 47184851 47184986 -38253494 - MIR3 SINE MIR -17 191 29 2138 92 0 7 chr17 47185594 47185904 -38252576 + AluSx SINE Alu 1 308 0 704 256 101 0 chr17 47186751 47186958 -38251522 - MIR SINE MIR -3 259 32 290 347 9 10 chr17 47187227 47187330 -38251150 - MIR SINE MIR -85 123 13 234 91 0 0 chr17 47188492 47188525 -38249955 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 351 121 0 0 chr17 47190029 47190087 -38248393 + (CA)n Simple_repeat Simple_repeat 1 58 0 411 21 0 0 chr17 47190390 47190438 -38248042 + (CA)n Simple_repeat Simple_repeat 2 49 0 245 256 37 37 chr17 47194235 47194317 -38244163 + G-rich Low_complexity Low_complexity 3 84 0 348 264 71 91 chr17 47196929 47197154 -38241326 + L1MC5 LINE L1 7514 7742 -219 1640 88 0 5 chr17 47197154 47197370 -38241110 - AluSq SINE Alu -31 282 68 1843 163 0 3 chr17 47197373 47197661 -38240819 - AluSx SINE Alu -25 287 1 348 264 71 91 chr17 47197661 47197727 -38240753 + L1MC5 LINE L1 7744 7803 -158 188 323 65 0 chr17 47197737 47197830 -38240650 + MIR SINE MIR 94 192 -70 202 306 111 14 chr17 47198024 47198168 -38240312 + L2 LINE L2 3003 3160 -153 2108 112 0 0 chr17 47198175 47198470 -38240010 - AluSx SINE Alu -17 295 1 251 322 59 26 chr17 47199487 47199639 -38238841 - L2 LINE L2 -1 3312 3156 2062 103 11 0 chr17 47199663 47199972 -38238508 + AluSq SINE Alu 1 312 0 469 298 77 0 chr17 47200487 47200655 -38237825 + MIR SINE MIR 56 236 -26 1786 142 44 24 chr17 47200701 47200997 -38237483 - AluSx SINE Alu -10 302 1 1237 277 92 11 chr17 47201131 47201579 -38236901 + MLT1L LTR MaLR 126 609 -6 201 138 0 0 chr17 47201687 47201716 -38236764 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2083 90 0 59 chr17 47201726 47202048 -38236432 - AluY SINE Alu -8 303 1 603 153 134 19 chr17 47202190 47202331 -38236149 + L1MB7 LINE L1 6010 6172 -12 2012 119 3 7 chr17 47202331 47202625 -38235855 - AluSq SINE Alu -20 293 1 603 153 134 19 chr17 47202625 47202640 -38235840 + L1MB7 LINE L1 6172 6184 0 409 282 95 35 chr17 47202948 47203155 -38235325 + MIR SINE MIR 9 235 -27 1539 178 34 14 chr17 47203409 47203702 -38234778 - AluJb SINE Alu -13 299 1 850 234 55 38 chr17 47203910 47204306 -38234174 - MER113 DNA MER1_type? -54 467 1 358 269 9 19 chr17 47204862 47204970 -38233510 + MIR SINE MIR 23 129 -79 1785 167 3 0 chr17 47207082 47207370 -38231110 + AluJo SINE Alu 13 301 -11 1130 189 0 18 chr17 47208142 47208364 -38230116 - AluJo SINE Alu -3 309 92 2353 83 0 0 chr17 47208365 47208667 -38229813 - AluY SINE Alu -9 302 1 180 156 22 0 chr17 47208708 47208753 -38229727 + L2 LINE L2 3014 3059 -213 360 0 0 0 chr17 47209252 47209292 -38229188 + (TG)n Simple_repeat Simple_repeat 2 41 0 2350 85 0 0 chr17 47210091 47210397 -38228083 - AluSg SINE Alu -4 306 1 577 315 0 28 chr17 47210627 47210805 -38227675 - MIR SINE MIR -59 203 31 539 265 72 55 chr17 47210943 47211124 -38227356 + MER91B DNA MER1_type 1 184 -6 2004 138 0 0 chr17 47211501 47211791 -38226689 + AluJb SINE Alu 1 290 -22 37 0 0 0 chr17 47211791 47211828 -38226652 + AT_rich Low_complexity Low_complexity 1 37 0 2246 91 0 19 chr17 47212016 47212334 -38226146 - AluSx SINE Alu 0 312 1 6571 53 22 5 chr17 47212695 47213062 -38225418 - L1PA6 LINE L1 -6 6148 5789 2315 80 0 0 chr17 47213062 47213539 -38224941 - AluY SINE Alu 0 311 1 6571 53 22 5 chr17 47213539 47214051 -38224429 - L1PA6 LINE L1 -365 5789 5254 604 265 113 10 chr17 47214289 47214493 -38223987 - MIR SINE MIR 0 262 38 213 287 79 10 chr17 47214937 47215038 -38223442 + MIR3 SINE MIR 78 185 -23 283 277 43 11 chr17 47215286 47215380 -38223100 + MIR SINE MIR 48 144 -118 1948 132 10 3 chr17 47215522 47215826 -38222654 - AluJo SINE Alu -6 306 1 237 241 0 76 chr17 47216028 47216107 -38222373 - MIR SINE MIR -79 183 111 615 189 256 5 chr17 47216737 47216928 -38221552 + MIR SINE MIR 9 247 -15 204 290 224 9 chr17 47216979 47217086 -38221394 + L2 LINE L2 3139 3268 -4 1401 204 7 36 chr17 47217101 47217410 -38221070 - AluJb SINE Alu -12 300 1 180 0 0 0 chr17 47217459 47217479 -38221001 + (T)n Simple_repeat Simple_repeat 1 20 0 261 83 17 50 chr17 47217944 47217987 -38220493 + (TTCC)n Simple_repeat Simple_repeat 3 45 -15 2037 130 0 9 chr17 47217987 47218302 -38220178 - AluSq SINE Alu -1 312 1 261 83 17 50 chr17 47218302 47218318 -38220162 + (TTCC)n Simple_repeat Simple_repeat 45 60 0 2067 112 3 3 chr17 47218639 47218935 -38219545 - AluSg SINE Alu -8 302 7 2011 144 0 0 chr17 47218939 47219244 -38219236 - AluSx SINE Alu -7 305 1 180 125 0 0 chr17 47219448 47219480 -38219000 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 312 294 77 7 chr17 47220201 47220344 -38218136 - L1ME4a LINE L1 -3 6118 5966 359 232 11 53 chr17 47220471 47220566 -38217914 + MIR SINE MIR 79 169 -93 282 116 0 0 chr17 47221121 47221164 -38217316 + (TG)n Simple_repeat Simple_repeat 1 43 0 332 279 41 16 chr17 47221510 47221632 -38216848 - L2 LINE L2 -11 3261 3137 263 301 81 15 chr17 47221916 47222052 -38216428 + MIR SINE MIR 48 192 -70 715 279 29 20 chr17 47222732 47222936 -38215544 - MER63A DNA MER1_type 0 210 5 2125 123 0 7 chr17 47223001 47223303 -38215177 - AluSx SINE Alu -12 300 1 250 229 73 31 chr17 47223439 47223535 -38214945 - MIR3 SINE MIR 0 208 109 397 366 50 26 chr17 47223676 47223979 -38214501 - L3 LINE CR1 -717 860 551 24 32 0 0 chr17 47224874 47224905 -38213575 + GC_rich Low_complexity Low_complexity 1 31 0 468 0 0 0 chr17 47225542 47225594 -38212886 + (TG)n Simple_repeat Simple_repeat 2 53 0 301 271 42 0 chr17 47226103 47226199 -38212281 + MIR3 SINE MIR 61 160 -48 751 198 134 30 chr17 47226311 47226513 -38211967 + MIR SINE MIR 33 255 -7 2240 99 13 0 chr17 47226516 47226820 -38211660 - AluSx SINE Alu -4 308 1 243 187 27 53 chr17 47227588 47227663 -38210817 - L3 LINE CR1 -1 1576 1504 282 111 25 22 chr17 47227663 47227697 -38210783 - MIR3 SINE MIR -1 203 123 1960 138 7 0 chr17 47227814 47228112 -38210368 - AluSx SINE Alu -12 300 1 284 316 63 14 chr17 47228138 47228300 -38210180 - MIR SINE MIR -70 192 23 199 244 90 13 chr17 47228560 47228638 -38209842 + MIR SINE MIR 29 112 -96 1883 135 35 0 chr17 47228853 47229141 -38209339 - AluSx SINE Alu -14 298 1 423 276 141 24 chr17 47229320 47229490 -38208990 + MIR SINE MIR 56 245 -17 1206 199 42 68 chr17 47229609 47229631 -38208849 - L1ME1 LINE L1 -21 6145 6124 2111 128 3 0 chr17 47229631 47229936 -38208544 - AluSx SINE Alu -6 306 1 1206 199 42 68 chr17 47229936 47230294 -38208186 - L1ME1 LINE L1 -42 6124 5775 819 116 217 0 chr17 47230394 47230570 -38207910 + AluSq SINE Alu 117 322 0 820 170 0 21 chr17 47230792 47230933 -38207547 + FLAM_C SINE Alu 1 138 -5 2198 118 0 0 chr17 47230942 47231246 -38207234 + AluSg SINE Alu 1 304 -6 1417 210 121 14 chr17 47231247 47231667 -38206813 - L1ME1 LINE L1 -423 5743 5259 1955 121 0 0 chr17 47231667 47231965 -38206515 - AluSx SINE Alu 0 309 12 1417 210 121 14 chr17 47231965 47232212 -38206268 - L1ME1 LINE L1 -907 5259 5040 306 0 0 0 chr17 47232212 47232246 -38206234 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1571 129 4 4 chr17 47232473 47232705 -38205775 - AluJo SINE Alu -72 240 9 2182 101 10 0 chr17 47232725 47233022 -38205458 - AluSq SINE Alu -13 300 1 1135 246 38 7 chr17 47233022 47233305 -38205175 - L1ME1 LINE L1 -1117 5029 4735 1140 281 21 11 chr17 47233328 47233702 -38204778 - L1ME1 LINE L1 -1382 4764 4387 595 242 84 11 chr17 47234173 47234351 -38204129 + MIR SINE MIR 11 201 -61 264 300 25 0 chr17 47234510 47234590 -38203890 - MIR SINE MIR -43 219 138 895 189 0 18 chr17 47234605 47234774 -38203706 - FRAM SINE Alu -15 161 1 254 158 18 53 chr17 47235571 47235628 -38202852 - MER46C DNA MER2_type -25 313 259 2365 90 3 0 chr17 47235628 47235940 -38202540 + AluSq SINE Alu 1 313 0 29 28 0 0 chr17 47235982 47236018 -38202462 + AT_rich Low_complexity Low_complexity 1 36 0 766 262 85 8 chr17 47236022 47236270 -38202210 - MER46C DNA MER2_type -71 267 1 2219 105 0 3 chr17 47236317 47236623 -38201857 - AluSx SINE Alu 0 312 8 412 179 0 0 chr17 47236789 47236856 -38201624 - FLAM_A SINE Alu -53 79 13 6690 202 41 61 chr17 47236891 47236927 -38201553 + L1MB7 LINE L1 2 37 -6609 2316 78 3 7 chr17 47236927 47237236 -38201244 + AluY SINE Alu 1 308 -3 6690 202 41 61 chr17 47237236 47238393 -38200087 + L1MB7 LINE L1 37 1216 -5430 731 168 8 8 chr17 47238393 47238524 -38199956 - FLAM_C SINE Alu -2 131 1 6690 202 41 61 chr17 47238524 47239180 -38199300 + L1MB7 LINE L1 1216 1802 -4844 1382 203 14 21 chr17 47239180 47239471 -38199009 + AluJb SINE Alu 2 290 -22 6690 202 41 61 chr17 47239471 47239691 -38198789 + L1MB7 LINE L1 1802 2025 -4621 2076 137 0 0 chr17 47239691 47239998 -38198482 + AluSx SINE Alu 1 307 -5 402 275 12 24 chr17 47240012 47240179 -38198301 + L1MB7 LINE L1 2265 2429 -4217 896 204 6 0 chr17 47240179 47240351 -38198129 - AluJo SINE Alu -139 173 1 1709 167 17 7 chr17 47240358 47240657 -38197823 - AluJo SINE Alu -4 308 7 1557 229 31 39 chr17 47240662 47241180 -38197300 + L1MB7 LINE L1 3758 4271 -2373 822 150 0 0 chr17 47241280 47241400 -38197080 + AluSq/x SINE Alu 2 120 -193 1993 105 0 0 chr17 47241400 47241677 -38196803 - AluSx SINE Alu -35 277 1 265 122 0 0 chr17 47241747 47241788 -38196692 - L1P4 LINE L1 -417 5751 5711 * 1887 232 22 8 chr17 47241782 47242286 -38196194 + L1MB7 LINE L1 5081 5591 -1053 4179 191 31 21 chr17 47242467 47243527 -38194953 + L1MB7 LINE L1 5594 6663 -19 762 169 0 0 chr17 47243966 47244084 -38194396 + FLAM_C SINE Alu 1 118 -15 21 0 0 0 chr17 47244465 47244486 -38193994 + AT_rich Low_complexity Low_complexity 1 21 0 773 144 0 16 chr17 47244506 47244631 -38193849 - FLAM_C SINE Alu -19 124 2 2079 121 3 16 chr17 47245434 47245749 -38192731 - AluSx SINE Alu -1 311 1 316 280 206 21 chr17 47245821 47246010 -38192470 + MIR SINE MIR 20 243 -19 611 211 22 94 chr17 47246249 47246429 -38192051 + MIR SINE MIR 63 229 -33 313 269 0 0 chr17 47246395 47246462 -38192018 - MIR SINE MIR -10 252 186 * 567 213 11 33 chr17 47247325 47247469 -38191011 + LTR39 LTR ERV1 475 776 -7 448 191 138 86 chr17 47247615 47247767 -38190713 - MER69 DNA AcHobo 0 2526 18 319 145 43 58 chr17 47248404 47248473 -38190007 + L2 LINE L2 3201 3268 -4 459 0 0 0 chr17 47248545 47248596 -38189884 + (ATG)n Simple_repeat Simple_repeat 2 52 0 1917 115 21 0 chr17 47248596 47248898 -38189582 - AluSx SINE Alu 0 308 1 685 85 0 21 chr17 47249433 47249527 -38188953 + AluS SINE Alu 2 93 -220 1782 102 4 0 chr17 47249532 47249778 -38188702 - AluSq SINE Alu -56 257 11 996 111 7 13 chr17 47249904 47250057 -38188423 - AluSx SINE Alu -159 153 2 217 263 0 35 chr17 47250153 47250210 -38188270 + MIR SINE MIR 96 150 -58 1017 222 33 0 chr17 47250652 47250864 -38187616 - MER20 DNA MER1_type 0 219 1 1950 97 4 4 chr17 47251475 47251754 -38186726 + AluY SINE Alu 1 279 -32 225 0 0 0 chr17 47251754 47251779 -38186701 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 581 242 23 0 chr17 47252153 47252281 -38186199 + MER5A DNA MER1_type 37 167 -22 196 284 135 68 chr17 47252637 47252785 -38185695 + L2 LINE L2 3156 3313 0 22 35 0 0 chr17 47253286 47253315 -38185165 + AT_rich Low_complexity Low_complexity 1 29 0 801 261 16 5 chr17 47253445 47253633 -38184847 - MER58C DNA MER1_type -11 204 15 222 322 0 68 chr17 47253815 47253933 -38184547 - MIR3 SINE MIR -3 205 96 677 176 17 0 chr17 47254491 47254610 -38183870 - FLAM_C SINE Alu -12 121 1 270 218 165 77 chr17 47254610 47254780 -38183700 - L1ME3 LINE L1 -47 6115 5931 2084 121 0 0 chr17 47254790 47255087 -38183393 + AluSq SINE Alu 1 297 -16 1328 115 31 0 chr17 47255087 47255279 -38183201 - AluSq SINE Alu -114 199 2 971 324 99 12 chr17 47255431 47256029 -38182451 + L1MC4a LINE L1 5284 5933 -1875 320 275 26 83 chr17 47256062 47256215 -38182265 + L1ME4a LINE L1 5939 6080 -41 1731 173 3 10 chr17 47256215 47256527 -38181953 + AluJb SINE Alu 1 310 -2 320 275 26 83 chr17 47256527 47256566 -38181914 + L1ME4a LINE L1 6080 6120 -1 221 341 73 37 chr17 47257490 47257654 -38180826 + L2 LINE L2 2715 2884 -430 2451 65 0 10 chr17 47257878 47258187 -38180293 - AluY SINE Alu -5 306 1 886 232 66 0 chr17 47258338 47258549 -38179931 - MIR SINE MIR -25 237 13 225 94 0 0 chr17 47261724 47261756 -38176724 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 2103 120 3 0 chr17 47262441 47262749 -38175731 + AluSq SINE Alu 1 309 -4 26 30 0 0 chr17 47262883 47262916 -38175564 + AT_rich Low_complexity Low_complexity 1 33 0 1502 168 53 34 chr17 47263102 47263376 -38175104 - Tigger3(Golem) DNA MER2_type 0 3029 2761 2271 107 0 3 chr17 47263376 47263686 -38174794 + AluSx SINE Alu 1 309 -3 1502 168 53 34 chr17 47263686 47263787 -38174693 - Tigger3(Golem) DNA MER2_type -268 2761 1 2371 93 0 0 chr17 47264265 47264575 -38173905 - AluSg SINE Alu 0 310 1 1273 153 165 4 chr17 47264577 47264832 -38173648 - AluJb SINE Alu -16 296 1 862 222 51 19 chr17 47265083 47265299 -38173181 + L1MC4 LINE L1 6767 6989 -1053 4836 160 46 12 chr17 47265308 47266377 -38172103 - L1MB7 LINE L1 -9 6175 5069 1853 242 47 25 chr17 47266377 47266968 -38171512 + L1MC4 LINE L1 6977 7580 -462 833 148 0 15 chr17 47266979 47267114 -38171366 + FLAM_C SINE Alu 1 133 0 1910 139 3 10 chr17 47267118 47267413 -38171067 - AluSx SINE Alu -15 297 5 438 218 16 32 chr17 47268533 47268657 -38169823 + MLT1K LTR MaLR 458 579 -9 942 219 5 10 chr17 47269318 47269523 -38168957 - Zaphod DNA AcHobo -19 4012 3809 685 180 0 0 chr17 47269531 47269642 -38168838 - AluSg/x SINE Alu -9 301 191 537 142 44 0 chr17 47269655 47269768 -38168712 - Zaphod DNA AcHobo -288 3743 3626 2466 226 97 51 chr17 47269779 47269908 -38168572 - Zaphod DNA AcHobo -3048 983 861 2052 124 7 0 chr17 47269908 47270035 -38168445 + AluSg SINE Alu 2 127 -183 183 42 0 0 chr17 47270035 47270059 -38168421 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2052 124 7 0 chr17 47270059 47270221 -38168259 + AluSg SINE Alu 127 293 -17 2466 226 97 51 chr17 47270221 47270274 -38168206 - Zaphod DNA AcHobo -3170 861 812 2376 70 0 3 chr17 47270274 47270573 -38167907 + AluY SINE Alu 1 298 -13 2466 226 97 51 chr17 47270573 47270781 -38167699 - Zaphod DNA AcHobo -3219 812 615 3270 118 11 34 chr17 47270781 47271207 -38167273 + MER75 DNA T2_type 2 415 -99 2063 119 3 3 chr17 47271207 47271519 -38166961 + AluSx SINE Alu 1 312 0 3270 118 11 34 chr17 47271519 47271617 -38166863 + MER75 DNA T2_type 415 514 0 2466 226 97 51 chr17 47271617 47272058 -38166422 - Zaphod DNA AcHobo -3416 615 100 1993 108 35 3 chr17 47272058 47272346 -38166134 - AluSx SINE Alu -15 297 1 2466 226 97 51 chr17 47272346 47272451 -38166029 - Zaphod DNA AcHobo -3931 100 1 1221 140 5 0 chr17 47272504 47272690 -38165790 - AluSc SINE Alu -20 289 103 205 329 24 12 chr17 47272897 47272979 -38165501 - MIR SINE MIR -179 83 1 297 317 50 17 chr17 47273157 47273277 -38165203 - MIR SINE MIR -19 243 120 1855 141 0 10 chr17 47273855 47274146 -38164334 + AluJo SINE Alu 1 288 -24 5017 55 0 0 chr17 47274358 47274961 -38163519 + L1PA5 LINE L1 5549 6151 -3 185 254 51 17 chr17 47275209 47275268 -38163212 + MIR SINE MIR 28 88 -174 1303 166 68 40 chr17 47275419 47275715 -38162765 - AluJb SINE Alu -8 304 1 1032 197 31 136 chr17 47275794 47275873 -38162607 + L1ME1 LINE L1 5743 5829 -337 1915 82 24 31 chr17 47275873 47275995 -38162485 + L1MA2 LINE L1 6016 6137 -167 2215 99 3 6 chr17 47275995 47276308 -38162172 + AluSq SINE Alu 1 312 -1 1915 82 24 31 chr17 47276308 47276475 -38162005 + L1MA2 LINE L1 6137 6304 0 1032 197 31 136 chr17 47276475 47276646 -38161834 + L1ME1 LINE L1 5829 5922 -244 1950 113 3 52 chr17 47276646 47276974 -38161506 + AluSx SINE Alu 1 312 0 1032 197 31 136 chr17 47276974 47277192 -38161288 + L1ME1 LINE L1 5922 6161 -5 1577 126 0 0 chr17 47277567 47277797 -38160683 - AluSg SINE Alu -48 262 33 2112 117 3 0 chr17 47278151 47278459 -38160021 + AluSx SINE Alu 1 309 -3 2073 100 0 0 chr17 47278547 47278956 -38159524 - AluSx SINE Alu 0 421 13 1875 119 28 3 chr17 47279035 47279321 -38159159 + AluJo SINE Alu 1 293 -19 382 254 269 21 chr17 47279337 47279530 -38158950 - MIR SINE MIR -17 245 5 298 340 0 39 chr17 47280305 47280408 -38158072 - MIR SINE MIR -59 149 51 1653 206 34 46 chr17 47280504 47280690 -38157790 - L1MC5 LINE L1 -303 7658 7471 2202 117 0 0 chr17 47280690 47280997 -38157483 - AluSq SINE Alu -6 307 1 1653 206 34 46 chr17 47280997 47281314 -38157166 - L1MC5 LINE L1 -490 7471 7161 1809 148 0 3 chr17 47281333 47281616 -38156864 - AluSx SINE Alu -30 282 1 470 163 20 31 chr17 47281619 47281717 -38156763 - L1MC5 LINE L1 -786 7175 7079 835 169 7 7 chr17 47281875 47282029 -38156451 + FRAM SINE Alu 1 154 -22 284 319 17 34 chr17 47282123 47282242 -38156238 - MIR3 SINE MIR -11 197 81 1496 266 52 22 chr17 47282859 47283322 -38155158 - MLT1J LTR MaLR 0 511 35 233 208 42 0 chr17 47283372 47283420 -38155060 - L1M2a LINE L1 -5746 1422 1373 1746 147 0 4 chr17 47283570 47283843 -38154637 - AluJb SINE Alu -38 274 3 764 204 40 12 chr17 47284069 47284266 -38154214 - L1ME3A LINE L1 0 6170 5971 2141 114 0 0 chr17 47284284 47284582 -38153898 - AluSq SINE Alu -15 298 1 293 210 0 16 chr17 47284584 47284646 -38153834 + MER5B DNA MER1_type 117 177 -1 271 139 0 0 chr17 47284656 47284699 -38153781 + MER5B DNA MER1_type 1 43 -135 287 219 123 0 chr17 47284757 47284830 -38153650 + MIR SINE MIR 67 148 -114 273 239 274 0 chr17 47285221 47285338 -38153142 - MIR SINE MIR -3 259 111 525 264 64 54 chr17 47285533 47285804 -38152676 - L1ME4a LINE L1 -1 6120 5844 2211 119 0 0 chr17 47285804 47286114 -38152366 - AluSq SINE Alu -3 310 1 525 264 64 54 chr17 47286114 47286137 -38152343 - L1ME4a LINE L1 -277 5844 5823 710 228 40 7 chr17 47286146 47286295 -38152185 - MER5B DNA MER1_type -24 154 1 1814 132 50 4 chr17 47286305 47286465 -38152015 - AluSx SINE Alu -18 294 114 189 0 0 0 chr17 47286465 47286486 -38151994 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1814 132 50 4 chr17 47286486 47286606 -38151874 - AluSx SINE Alu -198 114 1 302 185 89 68 chr17 47286606 47286720 -38151760 - L1ME4a LINE L1 -295 5826 5707 937 276 5 5 chr17 47286720 47286941 -38151539 - MER58A DNA MER1_type 0 224 4 302 185 89 68 chr17 47286941 47286972 -38151508 - L1ME4a LINE L1 -414 5707 5678 1913 96 59 4 chr17 47287036 47287340 -38151140 - AluSq SINE Alu 0 319 1 405 175 10 107 chr17 47287649 47287714 -38150766 - L1ME4a LINE L1 -468 5653 5600 2002 145 0 0 chr17 47287714 47288010 -38150470 + AluSx SINE Alu 1 296 -16 405 175 10 107 chr17 47288010 47288047 -38150433 - L1ME4a LINE L1 -521 5600 5561 472 246 168 72 chr17 47288651 47289038 -38149442 - MLT1H LTR MaLR -2 547 124 321 343 18 42 chr17 47289114 47289280 -38149200 - MLT1K LTR MaLR -358 230 69 388 225 145 29 chr17 47289751 47289889 -38148591 + L2 LINE L2 3159 3312 -1 320 323 52 31 chr17 47289892 47290084 -38148396 + L2 LINE L2 2223 2418 -896 2300 160 42 102 chr17 47290180 47290488 -38147992 - L1MB5 LINE L1 0 6174 5849 207 0 0 0 chr17 47290488 47290511 -38147969 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2005 106 7 3 chr17 47290511 47290793 -38147687 - AluSx SINE Alu -27 285 3 2300 160 42 102 chr17 47290793 47291124 -38147356 - L1MB5 LINE L1 -323 5851 5570 187 43 0 0 chr17 47291416 47291439 -38147041 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2175 106 11 0 chr17 47291439 47291721 -38146759 - AluSx SINE Alu -1 307 1 236 278 52 10 chr17 47291744 47291841 -38146639 + L2 LINE L2 2921 3021 -251 662 248 0 25 chr17 47292276 47292437 -38146043 - MIR SINE MIR 0 262 106 391 216 0 0 chr17 47292553 47292627 -38145853 - MER103 DNA DNA -46 120 47 210 171 0 24 chr17 47292703 47292744 -38145736 - MIR SINE MIR -55 153 114 283 167 21 0 chr17 47292834 47292882 -38145598 + MER58A DNA MER1_type 26 74 -33 364 283 51 43 chr17 47292882 47293020 -38145460 - MIR3 SINE MIR -49 159 21 2314 88 0 14 chr17 47293134 47293429 -38145051 - AluSg SINE Alu -2 308 18 180 77 0 0 chr17 47294343 47294369 -38144111 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 370 271 101 0 chr17 47294427 47294556 -38143924 + MIR SINE MIR 50 191 -71 1697 187 55 11 chr17 47294649 47294996 -38143484 + MLT1F1 LTR MaLR 206 567 0 222 224 41 0 chr17 47294996 47295045 -38143435 + MIR SINE MIR 158 208 -54 2336 101 10 0 chr17 47295091 47295398 -38143082 + AluSx SINE Alu 1 310 -2 2064 162 37 2 chr17 47295482 47295926 -38142554 + MER89 LTR ERV1 1 559 0 532 266 119 28 chr17 47296025 47296243 -38142237 + MIR SINE MIR 11 248 -14 199 125 75 0 chr17 47296642 47296682 -38141798 + MIR SINE MIR 108 150 -112 1792 161 33 13 chr17 47296685 47296989 -38141491 + AluJo SINE Alu 2 311 -1 1318 196 86 52 chr17 47297058 47297441 -38141039 - MSTD LTR MaLR 0 396 1 227 274 0 48 chr17 47297513 47297597 -38140883 + L2 LINE L2 2545 2624 -690 2489 43 0 36 chr17 47297803 47298144 -38140336 - AluY SINE Alu 0 311 1 536 102 31 31 chr17 47298251 47298379 -38140101 + GA-rich Low_complexity Low_complexity 1 128 0 440 132 25 182 chr17 47298471 47298630 -38139850 + MER5A DNA MER1_type 30 163 -26 27 0 0 0 chr17 47298899 47298926 -38139554 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr17 47299344 47299376 -38139104 + GC_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr17 47299727 47299750 -38138730 + GC_rich Low_complexity Low_complexity 1 23 0 2126 91 22 0 chr17 47302107 47302287 -38136193 - AluSx SINE Alu 0 313 123 189 0 0 0 chr17 47302287 47302308 -38136172 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2126 91 22 0 chr17 47302308 47302434 -38136046 - AluSx SINE Alu -190 123 1 2425 64 0 0 chr17 47302460 47302764 -38135716 + AluY SINE Alu 2 305 0 202 95 48 0 chr17 47302773 47302815 -38135665 + CT-rich Low_complexity Low_complexity 1 44 0 532 292 99 26 chr17 47303410 47303602 -38134878 + MIR SINE MIR 57 262 0 258 32 0 0 chr17 47303671 47303702 -38134778 + (A)n Simple_repeat Simple_repeat 1 31 0 432 234 90 0 chr17 47303805 47303916 -38134564 - MIR SINE MIR -91 171 51 2631 40 0 0 chr17 47303935 47304231 -38134249 - AluY SINE Alu -14 297 2 267 281 0 0 chr17 47304344 47304408 -38134072 - L2 LINE L2 -2 3311 3248 744 159 0 36 chr17 47305222 47305360 -38133120 + FLAM_C SINE Alu 1 133 0 222 196 0 39 chr17 47305436 47305487 -38132993 - MIR SINE MIR -153 109 61 180 242 61 45 chr17 47305809 47305875 -38132605 - L2 LINE L2 -52 3220 3154 301 298 13 25 chr17 47306337 47306478 -38132002 + GA-rich Low_complexity Low_complexity 1 139 0 285 304 52 0 chr17 47306988 47307103 -38131377 + MIR SINE MIR 93 213 -49 198 0 0 0 chr17 47307324 47307346 -38131134 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1902 125 54 0 chr17 47307346 47307615 -38130865 - AluSx SINE Alu -25 287 1 354 347 119 39 chr17 47307628 47307988 -38130492 - L1ME4a LINE L1 -10 6111 5723 2177 116 17 0 chr17 47308124 47308426 -38130054 - AluSx SINE Alu -5 307 1 394 212 227 30 chr17 47308528 47308726 -38129754 - MIR SINE MIR -6 256 20 464 196 89 18 chr17 47309737 47309849 -38128631 + MER5B DNA MER1_type 7 126 -52 193 343 137 0 chr17 47310034 47310180 -38128300 + MIR SINE MIR 76 241 -21 198 361 103 32 chr17 47310777 47311156 -38127324 + L2 LINE L2 2571 2976 -338 653 246 222 0 chr17 47311279 47311482 -38126998 - MIR SINE MIR 0 262 15 443 335 72 32 chr17 47311805 47312026 -38126454 - MIR SINE MIR -1 261 32 1398 171 5 5 chr17 47312037 47312259 -38126221 + AluJb SINE Alu 1 222 -90 423 156 52 0 chr17 47312313 47312390 -38126090 + AluJb SINE Alu 209 289 -23 1983 146 3 26 chr17 47312754 47313062 -38125418 + AluJb SINE Alu 1 301 -11 494 220 28 37 chr17 47313962 47314102 -38124378 + MIR3 SINE MIR 35 180 -28 347 278 62 28 chr17 47314373 47314517 -38123963 + MIR3 SINE MIR 21 169 -39 1794 159 14 14 chr17 47314589 47314884 -38123596 + AluJo SINE Alu 18 312 0 2247 121 3 0 chr17 47315124 47315422 -38123058 - AluSx SINE Alu -13 299 1 426 310 99 33 chr17 47315590 47315803 -38122677 + MIR SINE MIR 6 232 -30 454 257 124 80 chr17 47315816 47316331 -38122149 - MLT1H1 LTR MaLR -2 553 1 2304 96 14 10 chr17 47316342 47316635 -38121845 - AluSg SINE Alu -16 294 1 553 267 138 9 chr17 47316880 47317097 -38121383 - L1M4 LINE L1 -3792 2354 2110 1713 167 14 18 chr17 47317125 47317407 -38121073 - AluJo SINE Alu -9 303 23 2717 206 84 44 chr17 47317709 47318584 -38119896 - L1ME1 LINE L1 -30 6136 5233 2182 117 0 0 chr17 47321044 47321354 -38117126 - AluSx SINE Alu 0 310 1 1983 160 13 0 chr17 47321358 47321658 -38116822 - AluJb SINE Alu -8 304 1 2388 86 0 34 chr17 47322083 47322407 -38116073 + AluSp SINE Alu 1 313 0 208 135 0 27 chr17 47322819 47322856 -38115624 + (GGGTG)n Simple_repeat Simple_repeat 4 39 0 13548 29 16 3 chr17 47323184 47325640 -38112840 + L1PA4 LINE L1 3668 6155 0 28 0 0 0 chr17 47325640 47325668 -38112812 + AT_rich Low_complexity Low_complexity 1 28 0 580 277 63 29 chr17 47325810 47326016 -38112464 - MLT1K LTR MaLR -10 578 366 373 282 90 51 chr17 47326047 47326302 -38112178 - MLT1J LTR MaLR -240 271 7 180 278 56 22 chr17 47327717 47327807 -38110673 + MIR3 SINE MIR 13 105 -103 275 288 0 27 chr17 47328267 47328378 -38110102 + CT-rich Low_complexity Low_complexity 2 109 0 195 176 0 0 chr17 47328679 47328713 -38109767 - L2 LINE L2 -9 3304 3271 1299 238 97 60 chr17 47329102 47329669 -38108811 + MLT1G1 LTR MaLR 1 588 -7 234 308 13 0 chr17 47329681 47329759 -38108721 + L2 LINE L2 3235 3313 0 236 280 13 13 chr17 47329878 47329953 -38108527 + MLT1L LTR MaLR 460 534 -81 327 301 90 39 chr17 47330033 47330189 -38108291 - MIR SINE MIR -59 203 40 489 333 46 0 chr17 47330378 47330573 -38107907 - MIR SINE MIR -25 237 34 2404 83 0 7 chr17 47330614 47330914 -38107566 + AluSq SINE Alu 1 298 -15 384 248 124 0 chr17 47330965 47331070 -38107410 - MIR SINE MIR -96 166 49 2131 136 0 13 chr17 47331803 47332104 -38106376 - AluSx SINE Alu -15 297 1 2333 61 6 83 chr17 47332205 47332531 -38105949 - AluSp SINE Alu -12 301 1 275 237 120 2 chr17 47333144 47333238 -38105242 - MIR SINE MIR -70 138 36 434 280 40 34 chr17 47333733 47333785 -38104695 + MER5B DNA MER1_type 3 53 -125 2183 116 30 0 chr17 47333785 47334086 -38104394 + AluSx SINE Alu 1 310 -2 434 280 40 34 chr17 47334086 47334208 -38104272 + MER5B DNA MER1_type 53 178 0 184 228 219 9 chr17 47334286 47334400 -38104080 - MIR SINE MIR -111 151 14 184 294 24 12 chr17 47335214 47335299 -38103181 - L2 LINE L2 -357 2956 2871 480 209 131 20 chr17 47335574 47335727 -38102753 + MER5B DNA MER1_type 5 174 -4 1949 147 6 38 chr17 47336799 47337113 -38101367 + AluSx SINE Alu 1 304 -8 280 279 35 12 chr17 47337131 47337217 -38101263 - MER5A DNA MER1_type -78 111 24 692 185 3 157 chr17 47340222 47340508 -38097972 + L1ME2 LINE L1 4822 5063 -1083 * 1300 238 31 60 chr17 47340501 47340522 -38097958 + L1ME2 LINE L1 5718 5738 -426 1726 176 20 3 chr17 47340522 47340817 -38097663 + AluJo SINE Alu 1 300 -12 1300 238 31 60 chr17 47340817 47341245 -38097235 + L1ME2 LINE L1 5738 6154 -10 23 0 0 0 chr17 47341704 47341727 -38096753 + AT_rich Low_complexity Low_complexity 1 23 0 1489 154 7 70 chr17 47344149 47344422 -38094058 - AluJb SINE Alu -16 296 41 362 154 44 121 chr17 47344422 47344513 -38093967 - MIR SINE MIR -65 143 60 1373 170 123 11 chr17 47344718 47344994 -38093486 - AluJb SINE Alu -5 307 1 29 0 0 0 chr17 47348004 47348033 -38090447 + AT_rich Low_complexity Low_complexity 1 29 0 210 91 0 0 chr17 47348621 47348654 -38089826 + (A)n Simple_repeat Simple_repeat 1 33 0 585 258 103 0 chr17 47349409 47349564 -38088916 - MIR SINE MIR -85 177 7 533 248 107 82 chr17 47351102 47351839 -38086641 + L1ME LINE L1 4962 5716 -446 231 284 0 15 chr17 47352583 47352650 -38085830 - MER5B DNA MER1_type -5 173 108 184 0 97 0 chr17 47352814 47352845 -38085635 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 227 239 0 84 chr17 47353095 47353166 -38085314 - MIR3 SINE MIR -19 189 125 406 192 222 0 chr17 47353251 47353350 -38085130 + L2 LINE L2 3193 3313 0 1001 187 27 0 chr17 47353377 47353564 -38084916 + MER58A DNA MER1_type 24 215 -9 2681 148 62 8 chr17 47354205 47354719 -38083761 + L1MB4 LINE L1 5639 6180 0 7614 39 0 0 chr17 47356190 47357435 -38081045 - L1PA5 LINE L1 -1 6153 4909 1032 134 126 17 chr17 47357563 47357940 -38080540 - LTR54 LTR ERV1 -31 479 1 222 343 113 34 chr17 47358266 47358505 -38079975 - L2 LINE L2 -23 3249 2992 2490 97 3 0 chr17 47358708 47359019 -38079461 - AluSx SINE Alu 0 312 1 518 345 124 43 chr17 47359508 47359968 -38078512 - L2 LINE L2 -19 3253 2747 402 21 0 0 chr17 47360041 47360088 -38078392 + (TG)n Simple_repeat Simple_repeat 2 48 0 524 78 39 0 chr17 47360106 47360183 -38078297 + MADE1 DNA Mariner 1 80 0 2350 89 0 3 chr17 47360307 47360610 -38077870 + AluSc SINE Alu 1 302 -7 3300 203 40 6 chr17 47360947 47361606 -38076874 + MSTD-int LTR MaLR 1055 1735 0 1422 232 93 19 chr17 47361609 47361975 -38076505 + MSTD LTR MaLR 4 396 0 2558 223 20 2 chr17 47363123 47363662 -38074818 + MLT1H1 LTR MaLR 1 549 -6 221 303 112 11 chr17 47363818 47363907 -38074573 - L2 LINE L2 -221 3051 2954 2442 96 0 6 chr17 47364005 47364318 -38074162 - AluSx SINE Alu -1 311 1 2308 110 10 0 chr17 47364626 47364934 -38073546 + AluSx SINE Alu 1 311 -1 387 357 104 34 chr17 47365092 47365420 -38073060 + L2 LINE L2 2911 3261 -11 308 314 27 12 chr17 47365631 47365785 -38072695 - MIR SINE MIR -67 141 41 342 329 13 39 chr17 47366728 47366775 -38071705 - MIR SINE MIR -63 145 98 2317 107 3 3 chr17 47366775 47367084 -38071396 - AluSx SINE Alu -3 309 1 342 329 13 39 chr17 47367084 47367202 -38071278 - MIR SINE MIR -110 98 34 299 331 25 38 chr17 47367421 47367581 -38070899 + MIR SINE MIR 55 212 -50 333 265 110 29 chr17 47368499 47368635 -38069845 - MIR3 SINE MIR -59 149 3 432 174 20 31 chr17 47368870 47368968 -38069512 + L1PA12 LINE L1 5991 6087 -81 * 492 56 0 0 chr17 47368940 47369011 -38069469 + L1PA13 LINE L1 6092 6162 -1 999 206 68 20 chr17 47369052 47369344 -38069136 + MER33 DNA MER1_type 1 306 -18 1537 150 95 12 chr17 47369356 47369609 -38068871 + AluJo SINE Alu 3 276 -36 1761 137 0 63 chr17 47370818 47371117 -38067363 - AluJo SINE Alu -19 293 14 246 300 21 12 chr17 47371460 47371564 -38066916 + MIR SINE MIR 36 139 -69 191 237 0 0 chr17 47371786 47371824 -38066656 + L2 LINE L2 3220 3257 -15 887 224 82 23 chr17 47371848 47372067 -38066413 + MIR SINE MIR 4 235 -27 1027 149 0 29 chr17 47372082 47372256 -38066224 + AluJo SINE Alu 123 291 -21 30 0 0 0 chr17 47372256 47372286 -38066194 + AT_rich Low_complexity Low_complexity 1 30 0 354 61 0 0 chr17 47372863 47372912 -38065568 + (CA)n Simple_repeat Simple_repeat 2 50 0 2378 85 3 13 chr17 47373309 47373615 -38064865 + AluSq SINE Alu 1 303 -10 184 316 40 13 chr17 47373637 47373713 -38064767 - MIR SINE MIR -55 153 76 240 298 0 0 chr17 47374045 47374102 -38064378 + (CCCA)n Simple_repeat Simple_repeat 2 58 0 914 140 6 0 chr17 47374107 47374286 -38064194 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 697 196 0 12 chr17 47374307 47374480 -38064000 + (CCCA)n Simple_repeat Simple_repeat 2 172 0 445 237 7 7 chr17 47374493 47374768 -38063712 + (CCCA)n Simple_repeat Simple_repeat 1 275 0 705 182 6 12 chr17 47374785 47374955 -38063525 + (TCCA)n Simple_repeat Simple_repeat 3 171 0 190 367 117 17 chr17 47374995 47375115 -38063365 - L2 LINE L2 -3 3269 3138 795 294 134 23 chr17 47375124 47375377 -38063103 - MLT1L LTR MaLR -21 594 371 2217 131 3 0 chr17 47375377 47375683 -38062797 - AluSq SINE Alu -6 307 1 795 294 134 23 chr17 47375683 47375959 -38062521 - MLT1L LTR MaLR -244 371 6 339 25 0 0 chr17 47376193 47376233 -38062247 + (CA)n Simple_repeat Simple_repeat 2 41 0 2431 100 0 3 chr17 47376583 47376893 -38061587 + AluSx SINE Alu 1 309 -3 403 322 155 28 chr17 47377062 47377236 -38061244 + L2 LINE L2 2736 2886 -427 2282 112 3 0 chr17 47377236 47377560 -38060920 + AluSx SINE Alu 1 325 0 403 322 155 28 chr17 47377560 47377883 -38060597 + L2 LINE L2 2886 3313 0 2128 118 3 0 chr17 47378147 47378434 -38060046 + AluSx SINE Alu 1 288 -24 933 142 0 0 chr17 47378434 47378589 -38059891 + (TA)n Simple_repeat Simple_repeat 1 155 0 538 260 20 14 chr17 47378700 47378846 -38059634 - MIR SINE MIR -102 160 14 3801 125 25 50 chr17 47378941 47379298 -38059182 - L1MB7 LINE L1 -6 6178 5844 1598 171 0 49 chr17 47379298 47379633 -38058847 - AluSx SINE Alu 0 312 1 3801 125 25 50 chr17 47379633 47379953 -38058527 - L1MB7 LINE L1 -340 5844 5518 866 150 0 21 chr17 47380955 47381095 -38057385 + FLAM_C SINE Alu 7 143 0 745 200 0 21 chr17 47382112 47382252 -38056228 - FLAM_C SINE Alu -5 138 2 2067 100 0 53 chr17 47382257 47382728 -38055752 - AluY SINE Alu 0 455 1 238 259 54 80 chr17 47382985 47383097 -38055383 + MIR SINE MIR 122 230 -32 398 296 132 21 chr17 47383196 47383385 -38055095 - MIR SINE MIR -35 227 18 228 279 29 15 chr17 47384368 47384436 -38054044 - MIR SINE MIR -59 149 81 2077 138 10 0 chr17 47385491 47385796 -38052684 + AluSx SINE Alu 1 308 -4 304 296 54 43 chr17 47385836 47386022 -38052458 + L2 LINE L2 3120 3307 -6 344 369 120 8 chr17 47386084 47386325 -38052155 - L2 LINE L2 -86 3186 2919 2305 115 3 0 chr17 47386512 47386816 -38051664 + AluSx SINE Alu 7 311 -1 469 279 79 44 chr17 47387290 47387519 -38050961 + MIR SINE MIR 24 260 -2 459 282 79 35 chr17 47387670 47387872 -38050608 + MIR SINE MIR 49 259 -3 396 239 101 43 chr17 47388738 47388876 -38049604 - MIR SINE MIR -10 252 107 600 235 16 59 chr17 47389760 47389947 -38048533 + MIR SINE MIR 84 262 0 268 277 178 0 chr17 47390327 47390428 -38048052 - MIR SINE MIR 0 262 144 210 299 31 39 chr17 47390451 47390578 -38047902 + L2 LINE L2 2957 3082 -190 234 264 94 0 chr17 47390633 47390739 -38047741 - L1MC4a LINE L1 -1634 6174 6059 367 235 143 10 chr17 47390801 47390899 -38047581 + L2 LINE L2 3172 3282 -31 184 217 87 0 chr17 47390870 47390916 -38047564 + MIR SINE MIR 209 258 -4 * 243 0 0 0 chr17 47390932 47390959 -38047521 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2061 109 7 4 chr17 47390966 47391240 -38047240 - AluSx SINE Alu -35 277 3 2365 113 0 0 chr17 47391608 47391917 -38046563 + AluSx SINE Alu 1 309 -3 500 92 0 0 chr17 47391961 47392037 -38046443 - LTR54 LTR ERV1 0 510 435 293 222 117 105 chr17 47392101 47392263 -38046217 - MER57B LTR ERV1 -164 270 107 507 133 67 0 chr17 47392269 47392359 -38046121 - LTR54 LTR ERV1 -411 99 4 226 286 0 0 chr17 47392842 47392898 -38045582 + GA-rich Low_complexity Low_complexity 1 56 0 2205 126 0 0 chr17 47393122 47393415 -38045065 + AluSx SINE Alu 1 293 -19 2148 108 0 55 chr17 47393419 47393747 -38044733 + AluSp SINE Alu 1 292 -21 570 328 40 11 chr17 47393929 47394106 -38044374 + MIR SINE MIR 48 229 -33 335 195 179 0 chr17 47395040 47395140 -38043340 + MIR SINE MIR 35 151 -62 2247 96 3 3 chr17 47395140 47395443 -38043037 + AluSq SINE Alu 1 303 -10 2347 57 0 14 chr17 47395443 47395739 -38042741 + AluY SINE Alu 1 292 -19 974 67 0 0 chr17 47396144 47396264 -38042216 + AluSp/q SINE Alu 156 275 -38 861 267 26 4 chr17 47396264 47396530 -38041950 + L1MC4 LINE L1 7406 7677 -365 917 172 0 0 chr17 47396548 47396699 -38041781 - FRAM SINE Alu -9 167 17 618 254 71 12 chr17 47396723 47396963 -38041517 + L1MC4 LINE L1 7688 7941 -101 424 312 116 17 chr17 47397146 47397319 -38041161 + MIR SINE MIR 3 192 -70 218 324 0 62 chr17 47397862 47397962 -38040518 + MIR SINE MIR 56 150 -58 230 348 112 16 chr17 47397983 47398170 -38040310 + MIR3 SINE MIR 2 206 -56 509 286 48 0 chr17 47398181 47398328 -38040152 + L2 LINE L2 3160 3313 0 227 200 17 17 chr17 47398626 47398686 -38039794 - Charlie8 DNA MER1_type -2236 181 122 196 306 20 0 chr17 47399017 47399066 -38039414 + L2 LINE L2 3219 3268 -4 239 294 129 49 chr17 47399073 47399236 -38039244 + MIR SINE MIR 83 258 -4 201 196 20 20 chr17 47399757 47399808 -38038672 + GA-rich Low_complexity Low_complexity 2 52 0 303 322 33 16 chr17 47402551 47402672 -38035808 - MER91A DNA MER1_type -71 125 3 233 271 98 66 chr17 47402863 47402985 -38035495 + MIR3 SINE MIR 40 165 -43 181 319 101 14 chr17 47403156 47403225 -38035255 + L2 LINE L2 3197 3271 -1 228 211 0 0 chr17 47403647 47403685 -38034795 + polypurine Low_complexity Low_complexity 4 41 0 2155 118 0 0 chr17 47403847 47404136 -38034344 + AluSx SINE Alu 1 289 -23 30 0 0 0 chr17 47404136 47404166 -38034314 + AT_rich Low_complexity Low_complexity 1 30 0 190 314 162 9 chr17 47404233 47404338 -38034142 - MIR SINE MIR -61 147 27 1967 103 60 0 chr17 47404717 47404999 -38033481 - AluSg SINE Alu -11 299 1 1010 113 0 0 chr17 47405013 47405146 -38033334 - AluSq/x SINE Alu -178 135 3 350 328 64 0 chr17 47405298 47405423 -38033057 + L2 LINE L2 3139 3271 -1 423 0 0 0 chr17 47405591 47405638 -38032842 + (TG)n Simple_repeat Simple_repeat 1 47 0 196 152 0 0 chr17 47406340 47406373 -38032107 - MIR SINE MIR -116 146 114 337 336 44 15 chr17 47406475 47406612 -38031868 - MER5A DNA MER1_type -28 161 21 195 162 0 0 chr17 47406855 47406892 -38031588 + GA-rich Low_complexity Low_complexity 1 37 0 360 272 223 11 chr17 47406976 47407160 -38031320 + MIR SINE MIR 16 238 -24 275 348 37 44 chr17 47407232 47407367 -38031113 - MIR SINE MIR -57 151 18 410 311 11 40 chr17 47407437 47407518 -38030962 - MLT1I LTR MaLR -140 269 187 1943 143 13 0 chr17 47407518 47407825 -38030655 + AluJb SINE Alu 1 311 -1 410 311 11 40 chr17 47407825 47407920 -38030560 - MLT1I LTR MaLR -222 187 98 2140 113 7 0 chr17 47408717 47409008 -38029472 - AluSx SINE Alu -19 293 1 293 254 0 0 chr17 47409224 47409295 -38029185 + MER20 DNA MER1_type 91 161 -58 312 253 58 11 chr17 47409345 47409432 -38029048 + MER5A DNA MER1_type 1 91 -98 261 0 0 0 chr17 47410100 47410129 -38028351 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2069 96 0 14 chr17 47410135 47410415 -38028065 - AluSx SINE Alu -36 276 1 486 210 22 6 chr17 47411331 47411478 -38027002 + MIR SINE MIR 20 260 -2 250 197 395 0 chr17 47411475 47411551 -38026929 - L2 LINE L2 -21 3251 3146 * 477 209 0 0 chr17 47412233 47412381 -38026099 + (CA)n Simple_repeat Simple_repeat 2 149 0 1631 159 35 21 chr17 47412813 47413103 -38025377 + AluJb SINE Alu 1 294 -18 221 323 0 0 chr17 47413928 47413990 -38024490 - MIR SINE MIR -109 99 38 1116 241 117 53 chr17 47515651 47516277 -37922203 + L2 LINE L2 2401 3307 -6 2395 76 0 0 chr17 47516412 47516713 -37921767 + AluY SINE Alu 1 301 -10 2081 121 3 0 chr17 47516743 47517032 -37921448 + AluSg SINE Alu 1 290 -20 1167 188 31 5 chr17 47517032 47517255 -37921225 - AluJb SINE Alu -83 229 1 2426 76 0 0 chr17 47517302 47517606 -37920874 + AluY SINE Alu 1 304 -7 901 171 213 43 chr17 47517638 47517896 -37920584 + AluJb SINE Alu 1 302 0 314 315 132 24 chr17 47517982 47518195 -37920285 + L1ME3A LINE L1 5926 6161 -9 1969 126 13 13 chr17 47518231 47518540 -37919940 - AluY SINE Alu -2 309 1 1805 156 0 34 chr17 47518841 47518984 -37919496 + AluJo SINE Alu 1 147 -165 2257 73 0 33 chr17 47518984 47519286 -37919194 + AluY SINE Alu 7 298 -13 1805 156 0 34 chr17 47519286 47519463 -37919017 + AluJo SINE Alu 147 310 -2 1408 145 161 0 chr17 47519962 47520217 -37918263 + AluJb SINE Alu 5 300 -2 2225 84 3 17 chr17 47520244 47520543 -37917937 - AluSp SINE Alu -18 295 1 1935 148 0 13 chr17 47520543 47520846 -37917634 - AluJb SINE Alu -13 299 1 2406 21 0 3 chr17 47521152 47521481 -37916999 + AluY SINE Alu 1 328 0 730 304 26 7 chr17 47522205 47522449 -37916031 + MIR SINE MIR 3 249 -13 287 226 0 0 chr17 47522492 47522545 -37915935 - L2 LINE L2 -12 3260 3208 428 250 43 43 chr17 47522609 47522773 -37915707 - L1ME3A LINE L1 -36 6134 5971 253 271 0 0 chr17 47522777 47522847 -37915633 - L1ME3A LINE L1 -317 5853 5784 2297 98 10 0 chr17 47522868 47523174 -37915306 - AluY SINE Alu -2 309 1 2004 122 3 35 chr17 47523179 47523490 -37914990 - AluSx SINE Alu -11 301 1 642 238 86 0 chr17 47523493 47523762 -37914718 - L1M4 LINE L1 -2803 3343 3052 1060 116 0 0 chr17 47523764 47523911 -37914569 - AluSx SINE Alu -9 301 155 762 147 0 0 chr17 47523911 47524020 -37914460 - AluSx SINE Alu -204 109 1 419 132 26 13 chr17 47524026 47524124 -37914356 - AluJ/FRAM SINE Alu 0 312 232 2292 94 7 0 chr17 47524154 47524461 -37914019 - AluSp SINE Alu 0 313 5 2152 103 3 3 chr17 47524516 47524808 -37913672 + AluSx SINE Alu 7 298 -14 461 241 0 71 chr17 47524808 47524962 -37913518 - L1M4 LINE L1 -3136 3010 2873 2068 117 3 3 chr17 47524962 47525260 -37913220 + AluSp SINE Alu 1 298 -15 461 241 0 71 chr17 47525260 47525317 -37913163 - L1M4 LINE L1 -3273 2873 2814 1184 131 11 0 chr17 47525320 47525503 -37912977 - AluSq SINE Alu 0 313 129 1417 130 0 5 chr17 47525528 47525743 -37912737 - AluSq SINE Alu -5 308 95 672 172 78 0 chr17 47525744 47525860 -37912620 - AluSq SINE Alu -177 135 11 1362 241 23 10 chr17 47525862 47526256 -37912224 - L1M4 LINE L1 -3303 2843 2445 1720 164 31 0 chr17 47526259 47526551 -37911929 - AluJb SINE Alu -11 301 1 1370 207 24 24 chr17 47526629 47526728 -37911752 + AluJo SINE Alu 17 115 -197 2525 61 0 0 chr17 47526728 47527039 -37911441 - AluY SINE Alu 0 311 1 1370 207 24 24 chr17 47527039 47527234 -37911246 + AluJo SINE Alu 114 311 -1 324 107 0 0 chr17 47527245 47527301 -37911179 + L1MA4 LINE L1 6119 6174 -126 2002 128 3 16 chr17 47527452 47527757 -37910723 - AluSx SINE Alu -11 301 1 1806 263 141 3 chr17 47527788 47528518 -37909962 + HERV16 LTR ERVL 1630 2460 -2536 766 163 0 92 chr17 47528539 47528587 -37909893 - L1MB3 LINE L1 -1 6182 6131 2169 123 0 0 chr17 47528587 47528888 -37909592 + AluSq SINE Alu 1 301 -12 766 163 0 92 chr17 47528888 47528903 -37909577 - L1MB3 LINE L1 -52 6131 6116 1889 160 0 3 chr17 47528903 47529197 -37909283 - AluJo SINE Alu -19 293 1 2577 40 0 0 chr17 47529207 47529510 -37908970 - AluY SINE Alu -8 303 1 766 163 0 92 chr17 47529510 47529673 -37908807 - L1MB3 LINE L1 -76 6107 5966 291 238 0 0 chr17 47529674 47529737 -37908743 + HERV16 LTR ERVL 2469 2531 -2465 303 238 132 17 chr17 47530124 47530251 -37908229 + MER69 DNA AcHobo 2385 2526 0 1970 145 3 0 chr17 47530252 47530542 -37907938 - AluSx SINE Alu -15 297 7 1101 123 0 0 chr17 47530551 47530705 -37907775 - AluSq SINE Alu -157 156 3 2175 100 0 0 chr17 47530739 47531050 -37907430 - AluSg SINE Alu 0 311 1 180 179 0 0 chr17 47531530 47531569 -37906911 + (CA)n Simple_repeat Simple_repeat 2 40 0 1804 132 28 24 chr17 47531717 47532005 -37906475 + AluJo SINE Alu 1 289 -23 933 168 19 47 chr17 47532008 47532222 -37906258 + Tigger1 DNA MER2_type 1 208 -2210 2171 110 3 0 chr17 47532566 47532867 -37905613 - AluSx SINE Alu -10 302 1 190 319 154 0 chr17 47533838 47533929 -37904551 - L2 LINE L2 -17 3255 3151 2118 89 32 0 chr17 47534392 47534673 -37903807 - AluSx SINE Alu -22 290 1 246 260 14 0 chr17 47535693 47535766 -37902714 + G-rich Low_complexity Low_complexity 2 75 0 180 0 0 0 chr17 47536749 47536769 -37901711 + (CCCCG)n Simple_repeat Simple_repeat 2 21 0 197 400 0 0 chr17 47537194 47537299 -37901181 - MIR SINE MIR -74 134 30 231 344 0 21 chr17 47537949 47538045 -37900435 - MIR SINE MIR -11 251 158 344 266 64 138 chr17 47538851 47538909 -37899571 + MIR SINE MIR 64 125 -137 2054 119 0 42 chr17 47538909 47539219 -37899261 + AluSq SINE Alu 1 297 -16 2474 74 3 0 chr17 47539221 47539531 -37898949 + AluY SINE Alu 1 311 0 344 266 64 138 chr17 47539531 47539672 -37898808 + MIR SINE MIR 126 251 -11 241 260 0 27 chr17 47541111 47541184 -37897296 + L2 LINE L2 2904 2974 -339 206 167 17 50 chr17 47541461 47541521 -37896959 + (CGGGG)n Simple_repeat Simple_repeat 3 60 0 23 33 0 0 chr17 47541741 47541771 -37896709 + GC_rich Low_complexity Low_complexity 1 30 0 373 278 157 15 chr17 47542440 47542707 -37895773 - L2 LINE L2 -267 3046 2740 216 0 0 0 chr17 47545706 47545730 -37892750 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 1373 92 5 0 chr17 47547225 47547410 -37891070 + AluSp SINE Alu 125 310 -3 2152 97 6 67 chr17 47547938 47548322 -37890158 + AluSx SINE Alu 1 364 0 205 250 33 0 chr17 47548364 47548424 -37890056 - MIR SINE MIR -71 191 130 489 236 36 0 chr17 47548425 47548535 -37889945 - L2 LINE L2 -4 3268 3155 221 231 0 62 chr17 47548568 47548633 -37889847 + MIR SINE MIR 62 122 -86 2325 91 0 3 chr17 47549453 47549761 -37888719 + AluSg SINE Alu 2 308 -2 2112 126 0 3 chr17 47549774 47550068 -37888412 + AluSg SINE Alu 1 293 -17 1128 148 0 0 chr17 47550069 47550238 -37888242 + AluSg/x SINE Alu 134 302 -10 257 270 167 29 chr17 47550311 47550515 -37887965 + L2 LINE L2 2887 3118 -195 2090 87 21 10 chr17 47550526 47550814 -37887666 - AluSx SINE Alu -21 291 1 188 291 89 25 chr17 47551074 47551153 -37887327 + MIR SINE MIR 36 119 -89 181 332 138 37 chr17 47551354 47551622 -37886858 - L2 LINE L2 -145 3168 2874 183 309 140 51 chr17 47552430 47552608 -37885872 - MIR SINE MIR -18 244 51 623 320 104 0 chr17 47552809 47553031 -37885449 + MIR SINE MIR 17 261 -1 1597 173 0 7 chr17 47553087 47553401 -37885079 - AluJo SINE Alu 0 312 18 180 243 0 0 chr17 47553724 47553761 -37884719 - MIR SINE MIR -8 254 218 209 352 63 42 chr17 47554922 47555064 -37883416 - MIR SINE MIR -18 244 100 193 211 115 0 chr17 47555238 47555290 -37883190 + MIR SINE MIR 68 125 -137 2182 128 0 0 chr17 47555441 47555747 -37882733 + AluSx SINE Alu 1 306 -6 496 209 58 68 chr17 47555815 47556006 -37882474 + MER53 DNA DNA 1 189 0 200 298 58 87 chr17 47556012 47556220 -37882260 - L2 LINE L2 -95 3177 2976 2211 70 18 3 chr17 47556346 47556630 -37881850 + AluSg SINE Alu 3 290 -20 206 253 32 0 chr17 47557171 47557235 -37881245 - MIR SINE MIR -63 145 103 267 285 277 13 chr17 47557931 47558166 -37880314 + L3 LINE CR1 1280 1576 -1 203 368 23 0 chr17 47558243 47558330 -37880150 - MIR SINE MIR -1 261 173 2237 87 0 17 chr17 47558346 47558645 -37879835 + AluSc SINE Alu 1 294 -15 2406 73 0 3 chr17 47558645 47558946 -37879534 + AluSc SINE Alu 1 300 -9 2035 106 34 10 chr17 47558954 47559246 -37879234 + AluSq SINE Alu 1 299 -14 347 262 78 30 chr17 47559281 47559420 -37879060 - MIR SINE MIR -34 174 31 262 214 274 8 chr17 47560363 47560480 -37878000 - MIR3 SINE MIR -16 192 45 183 80 0 0 chr17 47561153 47561178 -37877302 + (CA)n Simple_repeat Simple_repeat 1 25 0 264 221 39 0 chr17 47561810 47561887 -37876593 + C-rich Low_complexity Low_complexity 5 84 0 23 0 0 0 chr17 47563370 47563393 -37875087 + GC_rich Low_complexity Low_complexity 1 23 0 211 256 12 12 chr17 47564866 47564948 -37873532 + (CCCG)n Simple_repeat Simple_repeat 4 85 0 201 218 0 77 chr17 47565015 47565093 -37873387 + (CCG)n Simple_repeat Simple_repeat 2 73 0 208 200 46 0 chr17 47565380 47565445 -37873035 + MIR SINE MIR 55 122 -86 221 294 0 33 chr17 47566373 47566465 -37872015 + CT-rich Low_complexity Low_complexity 2 90 0 411 106 0 0 chr17 47568574 47568640 -37869840 + (GGA)n Simple_repeat Simple_repeat 1 66 0 555 265 53 21 chr17 47568863 47569052 -37869428 + MER117 DNA MER1_type 3 197 0 2022 138 0 0 chr17 47570941 47571238 -37867242 - AluSx SINE Alu -15 297 1 205 283 104 38 chr17 47571250 47571356 -37867124 - MIR3 SINE MIR -49 159 47 24 53 0 0 chr17 47571503 47571541 -37866939 + GC_rich Low_complexity Low_complexity 1 38 0 24 32 0 0 chr17 47571548 47571579 -37866901 + GC_rich Low_complexity Low_complexity 1 31 0 218 200 0 67 chr17 47572402 47572477 -37866003 + GA-rich Low_complexity Low_complexity 1 70 0 585 134 31 10 chr17 47573686 47573783 -37864697 + FRAM SINE Alu 63 161 -15 35 41 0 0 chr17 47573783 47573832 -37864648 + AT_rich Low_complexity Low_complexity 1 49 0 2412 84 0 0 chr17 47573998 47574309 -37864171 - AluY SINE Alu 0 311 1 589 216 24 24 chr17 47574309 47574426 -37864054 - L2 LINE L2 -5 3308 3189 201 338 27 68 chr17 47575237 47575385 -37863095 - L2 LINE L2 -56 3216 3075 458 223 16 0 chr17 47578212 47578334 -37860146 + MER33 DNA MER1_type 1 119 -97 1015 155 6 0 chr17 47578334 47578495 -37859985 - AluJb SINE Alu -16 296 135 2342 83 0 0 chr17 47578495 47578795 -37859685 - AluSx SINE Alu -12 300 1 2174 117 0 7 chr17 47578806 47579105 -37859375 - AluSx SINE Alu -15 297 1 2304 94 0 0 chr17 47579248 47579547 -37858933 + AluSq SINE Alu 1 299 -14 2066 108 14 0 chr17 47579547 47579834 -37858646 + AluSq SINE Alu 1 292 -21 837 179 7 0 chr17 47579834 47579974 -37858506 - FLAM_C SINE Alu -2 141 1 863 172 29 5 chr17 47579975 47580184 -37858296 + MER33 DNA MER1_type 111 324 0 1346 143 0 19 chr17 47582711 47582927 -37855553 - AluJo SINE Alu -16 296 85 1992 133 0 0 chr17 47583386 47583701 -37854779 + AluSx SINE Alu 3 317 0 502 303 143 6 chr17 47583730 47583905 -37854575 + MIR SINE MIR 49 247 -15 873 266 70 73 chr17 47584223 47584509 -37853971 - L2 LINE L2 -275 3038 2752 2137 103 3 10 chr17 47584509 47584811 -37853669 - AluSc SINE Alu -9 300 1 441 36 0 0 chr17 47584813 47584868 -37853612 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2029 76 36 4 chr17 47584868 47585143 -37853337 - AluSp SINE Alu -29 284 1 873 266 70 73 chr17 47585143 47585443 -37853037 - L2 LINE L2 -560 2753 2451 1793 123 27 41 chr17 47585450 47585742 -37852738 + AluJb SINE Alu 11 298 -14 225 206 0 73 chr17 47585746 47585814 -37852666 + L1MC4 LINE L1 7169 7231 -811 680 168 0 35 chr17 47585816 47585851 -37852629 - AluSx SINE Alu -144 168 133 2095 109 7 3 chr17 47585851 47586145 -37852335 - AluSx SINE Alu -16 296 2 680 168 0 35 chr17 47586145 47586222 -37852258 - AluSx SINE Alu -179 133 60 232 224 165 0 chr17 47586222 47586307 -37852173 + L1MC4 LINE L1 7234 7332 -710 460 299 226 6 chr17 47586351 47586482 -37851998 + L1MC4 LINE L1 7436 7537 -505 1817 159 10 3 chr17 47586482 47586777 -37851703 + AluJb SINE Alu 1 297 -15 460 299 226 6 chr17 47586777 47586807 -37851673 + L1MC4 LINE L1 7537 7559 -483 2602 45 0 0 chr17 47586807 47587117 -37851363 + AluY SINE Alu 1 310 -1 460 299 226 6 chr17 47587117 47587449 -37851031 + L1MC4 LINE L1 7559 8039 -3 2350 87 0 10 chr17 47587451 47587763 -37850717 + AluSx SINE Alu 3 311 -1 510 240 77 60 chr17 47587790 47587924 -37850556 - L2 LINE L2 -1481 1833 1703 1745 136 93 0 chr17 47587924 47588203 -37850277 + AluJb SINE Alu 1 305 -7 2190 101 0 13 chr17 47588209 47588517 -37849963 + AluSg SINE Alu 1 304 -6 510 240 77 60 chr17 47588517 47588608 -37849872 - L2 LINE L2 -1615 1699 1597 1185 153 5 0 chr17 47589454 47589643 -37848837 + AluJb SINE Alu 117 306 -6 220 303 40 13 chr17 47589737 47589813 -37848667 - MIR SINE MIR -79 183 106 2098 125 0 7 chr17 47589899 47590203 -37848277 + AluSx SINE Alu 1 302 -10 215 231 197 51 chr17 47593704 47593821 -37844659 - L2 LINE L2 -184 3088 2955 267 401 40 9 chr17 47594538 47594765 -37843715 + MIR SINE MIR 14 247 -15 238 245 101 57 chr17 47596198 47596357 -37842123 + L2 LINE L2 2941 3106 -166 219 191 11 149 chr17 47596494 47596554 -37841926 + L2 LINE L2 3191 3235 -37 2246 105 0 3 chr17 47596554 47596860 -37841620 + AluSx SINE Alu 1 305 -7 219 191 11 149 chr17 47596860 47596893 -37841587 + L2 LINE L2 3235 3271 -1 216 284 145 41 chr17 47596909 47597048 -37841432 - MIR SINE MIR -47 161 13 * 430 151 32 32 chr17 47597046 47597139 -37841341 + MER5A DNA MER1_type 14 106 -83 1694 83 0 13 chr17 47597324 47597554 -37840926 + AluSg/x SINE Alu 85 311 -1 41 36 0 0 chr17 47599202 47599257 -37839223 + GC_rich Low_complexity Low_complexity 1 55 0 21 82 0 0 chr17 47599276 47599325 -37839155 + GC_rich Low_complexity Low_complexity 1 49 0 265 255 40 13 chr17 47600349 47600444 -37838036 - MIR SINE MIR -62 146 88 509 303 35 7 chr17 47600682 47600879 -37837601 - MIR SINE MIR -24 238 33 474 234 123 47 chr17 47600939 47601110 -37837370 - MIR SINE MIR -69 193 10 1708 175 3 7 chr17 47602023 47602156 -37836324 + AluJb SINE Alu 1 133 -179 2397 96 0 0 chr17 47602156 47602468 -37836012 + AluSq SINE Alu 1 312 -1 1708 175 3 7 chr17 47602468 47602625 -37835855 + AluJb SINE Alu 133 290 -22 2105 110 0 14 chr17 47602627 47602919 -37835561 + AluSx SINE Alu 1 288 -24 447 301 63 42 chr17 47602930 47603169 -37835311 - MIR SINE MIR 0 262 19 336 286 98 0 chr17 47603209 47603321 -37835159 - L2 LINE L2 0 3313 3191 436 324 159 0 chr17 47603812 47603982 -37834498 + MIR SINE MIR 48 244 -18 280 355 48 18 chr17 47604366 47604532 -37833948 - MIR SINE MIR -3 259 89 489 297 207 8 chr17 47604582 47604838 -37833642 + L3 LINE CR1 1264 1570 -7 181 321 231 8 chr17 47606809 47606943 -37831537 - MIR3 SINE MIR -43 165 2 423 256 76 29 chr17 47608284 47608456 -37830024 + MIR SINE MIR 79 258 -4 508 344 111 26 chr17 47608690 47609115 -37829365 - L2 LINE L2 0 3313 2853 2061 134 3 7 chr17 47609188 47609495 -37828985 + AluSx SINE Alu 1 306 -6 393 296 69 20 chr17 47611280 47611527 -37826953 - L1ME3A LINE L1 0 6170 5912 264 252 96 96 chr17 47611902 47612037 -37826443 - L2 LINE L2 -4 3268 3134 21 0 0 0 chr17 47613224 47613245 -37825235 + AT_rich Low_complexity Low_complexity 1 21 0 1721 154 0 11 chr17 47613245 47613530 -37824950 - AluJb SINE Alu -20 292 11 727 204 18 12 chr17 47614405 47614572 -37823908 + Charlie8 DNA MER1_type 23 190 -2227 594 283 88 26 chr17 47614959 47615185 -37823295 - MIR SINE MIR -21 241 2 1487 178 33 49 chr17 47616568 47616843 -37821637 + AluJo SINE Alu 1 272 -40 2146 105 3 7 chr17 47616843 47617147 -37821333 - AluSq SINE Alu -10 303 1 1487 178 33 49 chr17 47617147 47617175 -37821305 + AluJo SINE Alu 272 299 -13 1926 81 0 0 chr17 47617996 47618244 -37820236 - AluY SINE Alu -1 310 63 200 35 35 0 chr17 47719221 47719250 -37719230 + (GGAGA)n Simple_repeat Simple_repeat 4 33 0 215 361 90 19 chr17 47722084 47722239 -37716241 + L3b LINE CR1 1213 1378 -205 194 318 0 16 chr17 47724725 47724788 -37713692 + L3b LINE CR1 1324 1385 -198 274 81 0 0 chr17 47726139 47726176 -37712304 + MER63A DNA MER1_type 1 37 -173 377 167 69 0 chr17 47726194 47726266 -37712214 + MER63A DNA MER1_type 133 209 -1 180 268 36 0 chr17 47726893 47726949 -37711531 + MIR3 SINE MIR 151 208 0 261 199 15 44 chr17 47727144 47727280 -37711200 + GA-rich Low_complexity Low_complexity 4 135 0 238 254 0 0 chr17 47728390 47728445 -37710035 + CT-rich Low_complexity Low_complexity 2 56 0 322 325 40 8 chr17 47730555 47730681 -37707799 + MIR SINE MIR 84 213 -49 2064 131 3 0 chr17 47730720 47731017 -37707463 - AluSx SINE Alu -14 298 1 2184 93 3 0 chr17 47731027 47731317 -37707163 - AluSc SINE Alu -18 291 1 291 200 50 0 chr17 47731319 47731379 -37707101 + MIR SINE MIR 101 163 -99 249 196 0 0 chr17 47731441 47731492 -37706988 + GA-rich Low_complexity Low_complexity 2 52 0 2055 120 13 10 chr17 47731519 47731820 -37706660 - AluSx SINE Alu -10 302 1 219 287 35 35 chr17 47732715 47732802 -37705678 + L3b LINE CR1 1297 1383 -200 359 269 67 8 chr17 47734046 47734165 -37704315 - MIR SINE MIR -89 173 48 247 231 34 26 chr17 47734624 47734741 -37703739 + (CAGAGA)n Simple_repeat Simple_repeat 3 120 0 195 323 86 0 chr17 47736076 47736169 -37702311 + L2 LINE L2 3148 3248 -24 255 280 88 34 chr17 47736467 47736600 -37701880 - MIR SINE MIR -63 145 15 2087 87 0 14 chr17 47736962 47737277 -37701203 + AluSg SINE Alu 1 311 0 284 284 34 0 chr17 47737616 47737704 -37700776 + MER5A DNA MER1_type 41 131 -58 1136 136 6 0 chr17 47737909 47738086 -37700394 - AluSg/x SINE Alu -1 311 134 2130 121 10 0 chr17 47738086 47738393 -37700087 - AluSx SINE Alu -2 310 1 421 200 0 12 chr17 47738440 47738520 -37699960 + MIR SINE MIR 17 95 -113 331 283 41 7 chr17 47739938 47740083 -37698397 + HAL1b LINE L1 1192 1341 -7 358 355 5 65 chr17 47740321 47740538 -37697942 - MIR SINE MIR -50 212 9 228 222 19 19 chr17 47740741 47740795 -37697685 + L2 LINE L2 3253 3306 -7 276 312 0 72 chr17 47740847 47740985 -37697495 - L2 LINE L2 -191 3081 2954 257 214 18 0 chr17 47741115 47741171 -37697309 + (CGGGG)n Simple_repeat Simple_repeat 2 58 0 261 83 0 0 chr17 47742402 47742438 -37696042 + (TGG)n Simple_repeat Simple_repeat 3 38 0 600 40 0 0 chr17 47742527 47742602 -37695878 + (TG)n Simple_repeat Simple_repeat 1 75 0 452 254 65 29 chr17 47743431 47743569 -37694911 - MIR3 SINE MIR -19 189 47 244 327 9 36 chr17 47743681 47743791 -37694689 - MIR SINE MIR -93 169 63 319 272 121 26 chr17 47744147 47744419 -37694061 - L1MC5 LINE L1 -36 7925 7628 2212 98 3 0 chr17 47745595 47745891 -37692589 - AluSx SINE Alu -15 297 1 813 175 15 0 chr17 47745913 47746050 -37692430 - FLAM_C SINE Alu -4 139 1 1372 129 0 19 chr17 47746130 47746340 -37692140 - AluJo SINE Alu -21 291 86 468 259 19 90 chr17 47746433 47746571 -37691909 - L1ME LINE L1 -533 5588 5494 2318 91 0 0 chr17 47746571 47746867 -37691613 - AluSx SINE Alu -16 296 1 468 259 19 90 chr17 47746867 47746965 -37691515 - L1ME LINE L1 -627 5494 5391 1175 222 80 35 chr17 47747306 47747446 -37691034 + AluJo SINE Alu 2 134 -168 2251 84 0 10 chr17 47747446 47747745 -37690735 + AluSx SINE Alu 3 298 -14 1175 222 80 35 chr17 47747745 47747892 -37690588 + AluJo SINE Alu 134 302 0 219 245 226 9 chr17 47747923 47748029 -37690451 + MIR SINE MIR 23 151 -111 2086 118 0 7 chr17 47748029 47748335 -37690145 - AluSx SINE Alu -8 304 1 1982 139 14 0 chr17 47748419 47748706 -37689774 + AluSx SINE Alu 1 291 -21 409 232 0 9 chr17 47749079 47749317 -37689163 + (TGG)n Simple_repeat Simple_repeat 1 235 0 1894 234 58 7 chr17 47749756 47750022 -37688458 + MER63B DNA MER1_type 1 297 -765 2179 95 0 43 chr17 47750022 47750349 -37688131 - AluSq SINE Alu 0 313 1 1894 234 58 7 chr17 47750349 47750497 -37687983 + MER63B DNA MER1_type 297 436 0 2333 97 0 0 chr17 47751567 47751877 -37686603 + AluSg SINE Alu 1 310 0 183 129 0 0 chr17 47753966 47753997 -37684483 + (T)n Simple_repeat Simple_repeat 1 31 0 435 153 28 0 chr17 47754500 47754572 -37683908 - MER116 DNA Mariner -6 74 1 283 215 31 15 chr17 47754572 47754637 -37683843 + MIR SINE MIR 197 262 0 2181 113 0 0 chr17 47754708 47755008 -37683472 - AluSq SINE Alu -13 300 1 325 262 58 0 chr17 47755009 47755112 -37683368 - HAL1b LINE L1 -13 1335 1227 567 230 8 89 chr17 47755117 47755203 -37683277 - HAL1b LINE L1 -186 1162 1071 288 0 0 0 chr17 47755203 47755235 -37683245 + (CA)n Simple_repeat Simple_repeat 1 32 0 567 230 8 89 chr17 47755235 47755322 -37683158 - HAL1b LINE L1 -277 1071 1014 2194 86 3 7 chr17 47755322 47755623 -37682857 - AluSc SINE Alu -7 302 3 567 230 8 89 chr17 47755623 47755705 -37682775 - HAL1b LINE L1 -334 1014 927 198 0 0 0 chr17 47755803 47755825 -37682655 + (T)n Simple_repeat Simple_repeat 1 22 0 904 146 0 0 chr17 47756486 47756616 -37681864 - FLAM_C SINE Alu -3 130 1 592 246 124 67 chr17 47756677 47757080 -37681400 - L1ME3A LINE L1 -220 6186 5761 852 276 184 19 chr17 47757099 47757380 -37681100 - L1P LINE L1 -737 5419 5186 1617 192 17 0 chr17 47757380 47757682 -37680798 - AluJo SINE Alu -5 307 1 852 276 184 19 chr17 47757682 47758442 -37680038 - L1P LINE L1 -970 5186 4196 1330 84 0 0 chr17 47758442 47758620 -37679860 + AluY SINE Alu 133 310 -1 249 289 0 0 chr17 47758621 47758704 -37679776 - L1ME3A LINE L1 -1944 4438 4356 1353 202 0 57 chr17 47758759 47759056 -37679424 - AluJo SINE Alu -32 280 1 463 307 65 22 chr17 47759451 47759669 -37678811 - L1ME3A LINE L1 -4584 1979 1772 2008 119 0 52 chr17 47759669 47759996 -37678484 - AluSx SINE Alu -2 310 1 463 307 65 22 chr17 47759996 47760329 -37678151 - L1ME3A LINE L1 -4791 1772 1265 1622 142 14 37 chr17 47760330 47760625 -37677855 - AluJo SINE Alu -12 300 13 730 215 86 142 chr17 47760873 47760994 -37677486 - HAL1 LINE L1 -867 1640 1514 1923 134 0 13 chr17 47760994 47761293 -37677187 - AluSx SINE Alu -17 295 1 730 215 86 142 chr17 47761293 47761554 -37676926 - HAL1 LINE L1 -993 1514 1278 2011 119 3 0 chr17 47761554 47761839 -37676641 + AluSx SINE Alu 10 295 -17 730 215 86 142 chr17 47761839 47761850 -37676630 - HAL1 LINE L1 -1229 1278 1268 442 110 0 0 chr17 47761879 47761952 -37676528 - FLAM_C SINE Alu 0 143 71 631 308 74 58 chr17 47762070 47762668 -37675812 - HAL1 LINE L1 -1837 670 64 2295 79 0 0 chr17 47762681 47762973 -37675507 - AluSg SINE Alu -18 292 1 353 282 69 119 chr17 47762993 47763205 -37675275 - HAL1b LINE L1 -1046 1312 1091 2262 84 0 31 chr17 47763205 47763525 -37674955 - AluY SINE Alu 0 311 2 1863 161 0 7 chr17 47763526 47763831 -37674649 - AluJb SINE Alu -9 303 1 353 282 69 119 chr17 47763831 47763911 -37674569 - HAL1b LINE L1 -1266 1092 50 444 123 0 0 chr17 47764113 47764178 -37674302 + HY4 scRNA scRNA 1 65 -28 2363 79 0 0 chr17 47764374 47764678 -37673802 + AluY SINE Alu 1 304 -7 492 308 98 25 chr17 47766275 47766723 -37671757 - L1MC4 LINE L1 -70 7972 7492 2644 125 29 7 chr17 47766790 47767198 -37671282 - Tigger2 DNA MER2_type -29 2689 2273 380 209 0 0 chr17 47767184 47767251 -37671229 - Tigger2 DNA MER2_type -2646 72 6 * 414 101 0 0 chr17 47767781 47767850 -37670630 - L1MD2 LINE L1 -2 6357 6289 362 109 0 0 chr17 47767850 47767896 -37670584 + Alu SINE Alu 2 47 -255 1166 166 0 0 chr17 47767903 47768090 -37670390 + AluSg/x SINE Alu 102 288 -22 1061 171 61 18 chr17 47768109 47768337 -37670143 - L1MD1 LINE L1 -49 6193 5956 730 213 106 26 chr17 47768331 47768647 -37669833 - L1MDa LINE L1 -3644 2896 2550 * 3289 214 70 74 chr17 47768728 47768797 -37669683 - L1MDa LINE L1 -2508 4032 3964 1882 151 0 13 chr17 47768797 47769101 -37669379 - AluJb SINE Alu -12 300 1 3289 214 70 74 chr17 47769101 47769609 -37668871 - L1MDa LINE L1 -2576 3964 3455 2058 125 20 0 chr17 47769609 47769913 -37668567 - AluSx SINE Alu -2 310 1 3289 214 70 74 chr17 47769913 47769960 -37668520 - L1MDa LINE L1 -3085 3455 3409 1647 201 0 0 chr17 47769960 47770264 -37668216 + AluSx SINE Alu 1 304 -8 3289 214 70 74 chr17 47770264 47770507 -37667973 - L1MDa LINE L1 -3131 3409 3166 2162 109 0 0 chr17 47770507 47770801 -37667679 + AluSx SINE Alu 1 294 -18 3289 214 70 74 chr17 47770801 47770934 -37667546 - L1MDa LINE L1 -3374 3166 3034 1771 136 63 0 chr17 47770934 47771220 -37667260 - AluSg SINE Alu -6 304 1 3289 214 70 74 chr17 47771220 47771492 -37666988 - L1MDa LINE L1 -3506 3034 2760 1801 179 0 0 chr17 47771492 47771793 -37666687 + AluSx SINE Alu 2 302 -10 3289 214 70 74 chr17 47771793 47771900 -37666580 - L1MDa LINE L1 -3780 2760 2654 1116 185 134 21 chr17 47771909 47772147 -37666333 + Tigger7 DNA MER2_type 3 267 -2220 745 111 0 0 chr17 47772145 47772244 -37666236 + Tigger7 DNA MER2_type 2389 2487 0 * 4826 162 57 19 chr17 47772244 47772629 -37665851 - L1MDa LINE L1 -3890 2650 2281 1643 141 0 95 chr17 47772629 47772956 -37665524 + AluSq SINE Alu 1 296 -17 4826 162 57 19 chr17 47772956 47773618 -37664862 - L1MDa LINE L1 -4259 2281 1563 1517 158 26 15 chr17 47773618 47773891 -37664589 - AluSx SINE Alu -16 296 21 465 220 10 10 chr17 47773891 47773991 -37664489 - AluJ/FLAM SINE Alu -211 101 2 207 0 0 0 chr17 47773999 47774022 -37664458 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1583 149 3 32 chr17 47774062 47774344 -37664136 - AluSx SINE Alu -38 274 1 2658 223 82 32 chr17 47774353 47775235 -37663245 - L1MDa LINE L1 -4967 1573 351 3278 129 33 6 chr17 47775235 47775714 -37662766 - MER1A DNA MER1_type -1 528 37 2070 97 3 13 chr17 47775735 47776033 -37662447 + AluSc SINE Alu 1 295 -14 500 317 49 69 chr17 47776061 47776168 -37662312 - L1 LINE L1 -1488 4658 4550 1992 131 3 0 chr17 47776168 47776459 -37662021 - AluSx SINE Alu -20 292 1 500 317 49 69 chr17 47776459 47776758 -37661722 - L1 LINE L1 -1596 4550 4260 308 319 128 57 chr17 47776808 47777231 -37661249 + MLT1K LTR MaLR 136 588 0 418 320 114 23 chr17 47777840 47778059 -37660421 - MLT1K LTR MaLR -285 303 65 1966 137 0 7 chr17 47778655 47778955 -37659525 - AluSx SINE Alu -14 298 1 347 284 30 51 chr17 47779167 47779364 -37659116 - HAL1 LINE L1 -89 2418 2226 21 57 0 0 chr17 47779404 47779439 -37659041 + AT_rich Low_complexity Low_complexity 1 35 0 346 177 0 0 chr17 47779471 47779533 -37658947 - HAL1 LINE L1 -856 1651 1590 502 208 33 35 chr17 47779545 47779731 -37658749 - MLT1J LTR MaLR -2 509 324 2336 84 0 0 chr17 47779731 47780029 -37658451 - AluSg SINE Alu -12 298 1 502 208 33 35 chr17 47780029 47780171 -37658309 - MLT1J LTR MaLR -187 324 74 1892 153 3 16 chr17 47780171 47780478 -37658002 - AluJb SINE Alu -9 303 1 1761 169 7 0 chr17 47780490 47780791 -37657689 - AluSx SINE Alu -9 303 1 1016 131 6 12 chr17 47780840 47781000 -37657480 - FRAM SINE Alu -18 158 1 352 337 48 37 chr17 47781273 47781543 -37656937 + L2 LINE L2 2176 2448 -866 343 326 74 98 chr17 47781559 47781763 -37656717 + L2 LINE L2 2927 3122 -150 2044 113 14 0 chr17 47781763 47782056 -37656424 - AluSq SINE Alu -16 297 1 343 326 74 98 chr17 47782056 47782176 -37656304 + L2 LINE L2 3122 3243 -29 1087 95 0 0 chr17 47782181 47782329 -37656151 - AluSg/x SINE Alu -8 301 154 1073 262 57 84 chr17 47782358 47782938 -37655542 + MLT1K LTR MaLR 23 586 -2 225 351 44 60 chr17 47783260 47783508 -37654972 + L2 LINE L2 2978 3221 -51 671 193 210 6 chr17 47784049 47784225 -37654255 + MIR SINE MIR 2 213 -49 2068 109 84 0 chr17 47784379 47784700 -37653780 - MER7A DNA MER2_type 0 346 1 294 170 283 28 chr17 47785614 47785720 -37652760 + MIR3 SINE MIR 7 139 -69 2774 55 9 0 chr17 47786794 47787138 -37651342 - L1PA6 LINE L1 0 6154 5808 342 245 56 91 chr17 47787209 47787352 -37651128 - L1ME4a LINE L1 0 6121 5984 1982 139 0 13 chr17 47787377 47787693 -37650787 + AluJo SINE Alu 1 312 0 568 320 26 11 chr17 47787700 47787969 -37650511 - L1ME4a LINE L1 -248 5873 5601 2301 104 0 0 chr17 47788259 47788568 -37649912 + AluSx SINE Alu 1 309 -3 295 321 123 5 chr17 47789679 47789878 -37648602 - MIR SINE MIR -14 248 23 1611 163 11 65 chr17 47790146 47790409 -37648071 + L1MD2 LINE L1 5568 5844 -515 1973 146 0 0 chr17 47790409 47790718 -37647762 + AluSx SINE Alu 4 312 0 342 0 0 0 chr17 47790724 47790762 -37647718 + (CA)n Simple_repeat Simple_repeat 2 39 0 1611 163 11 65 chr17 47790762 47790846 -37647634 + L1MD2 LINE L1 5849 5903 -456 1603 142 109 0 chr17 47791065 47791332 -37647148 - AluSg SINE Alu -14 296 1 544 231 39 15 chr17 47791353 47791483 -37646997 - FLAM_A SINE Alu 0 133 1 626 158 0 138 chr17 47792339 47792399 -37646081 - FLAM_A SINE Alu -169 162 95 2100 119 0 10 chr17 47792399 47792702 -37645778 + AluSx SINE Alu 1 300 -12 626 158 0 138 chr17 47792702 47792823 -37645657 - FLAM_A SINE Alu -236 95 2 327 25 0 0 chr17 47793094 47793134 -37645346 + (TG)n Simple_repeat Simple_repeat 2 41 0 194 0 39 0 chr17 47794095 47794121 -37644359 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 561 295 63 19 chr17 47794171 47794285 -37644195 + L1M4 LINE L1 2745 2873 -3273 1690 158 0 4 chr17 47794285 47794563 -37643917 + AluJo SINE Alu 1 277 -35 561 295 63 19 chr17 47794563 47794655 -37643825 + L1M4 LINE L1 2873 2960 -3186 512 281 41 27 chr17 47794655 47794876 -37643604 + L1M4 LINE L1 3850 4073 -2073 2051 131 3 3 chr17 47795103 47795416 -37643064 - AluSq SINE Alu 0 313 1 973 111 0 0 chr17 47795416 47795551 -37642929 - AluSq/x SINE Alu -177 135 1 2146 228 84 45 chr17 47795553 47795608 -37642872 + L1M4 LINE L1 4317 4368 -1778 1254 191 67 46 chr17 47795608 47795881 -37642599 + AluJb SINE Alu 1 282 -20 1058 104 6 0 chr17 47795881 47796044 -37642436 + (GGAA)n Simple_repeat Simple_repeat 2 165 0 2146 228 84 45 chr17 47796052 47796070 -37642410 + L1M4 LINE L1 4368 4384 -1762 2043 107 3 7 chr17 47796070 47796384 -37642096 + AluSq SINE Alu 7 313 0 2146 228 84 45 chr17 47796384 47797117 -37641363 + L1M4 LINE L1 4384 5156 -990 438 149 21 53 chr17 47797112 47797206 -37641274 + L1M LINE L1 5316 5406 -760 * 2571 35 0 3 chr17 47797313 47797623 -37640857 - AluY SINE Alu -2 309 1 1168 260 78 19 chr17 47798538 47799667 -37638813 - HAL1 LINE L1 -442 2065 150 2344 78 10 0 chr17 47799703 47800009 -37638471 - AluSx SINE Alu -3 309 1 277 278 78 17 chr17 47800066 47800181 -37638299 + L1MEc LINE L1 1745 1866 -4530 * 3375 186 55 55 chr17 47800178 47800917 -37637563 + L1ME1 LINE L1 4977 5716 -450 1718 146 32 4 chr17 47800917 47801199 -37637281 + AluJb SINE Alu 1 273 -39 3375 186 55 55 chr17 47801199 47801644 -37636836 + L1ME1 LINE L1 5716 6160 -6 313 269 191 44 chr17 47801727 47801842 -37636638 - L1MC/D LINE L1 -301 5820 5723 792 120 0 0 chr17 47801843 47802149 -37636331 + AluSx SINE Alu 2 307 0 313 269 191 44 chr17 47802126 47802234 -37636246 - L1MC/D LINE L1 -398 5723 5611 * 1887 139 0 0 chr17 47802668 47802935 -37635545 + AluJb SINE Alu 1 267 -45 1021 285 64 29 chr17 47803051 47803704 -37634776 + L1MC5 LINE L1 7256 7931 -30 2482 67 3 0 chr17 47804005 47804317 -37634163 + AluSp SINE Alu 1 313 0 27 0 0 0 chr17 47804542 47804569 -37633911 + AT_rich Low_complexity Low_complexity 1 27 0 2385 90 0 0 chr17 47804713 47805024 -37633456 - AluY SINE Alu 0 311 1 2034 123 0 51 chr17 47805061 47805377 -37633103 + AluSx SINE Alu 1 300 -12 2235 118 86 12 chr17 47805468 47805807 -37632673 + THE1B LTR MaLR 1 364 0 445 238 72 99 chr17 47806724 47806765 -37631715 + HAL1 LINE L1 2127 2168 -339 2075 139 0 3 chr17 47806765 47807075 -37631405 - AluSx SINE Alu -3 309 1 445 238 72 99 chr17 47807075 47807395 -37631085 + HAL1 LINE L1 2168 2478 -29 2214 100 13 0 chr17 47807423 47807723 -37630757 + AluSg SINE Alu 1 304 -6 664 191 9 0 chr17 47807730 47807845 -37630635 - FLAM_C SINE Alu -27 116 1 282 298 114 29 chr17 47808045 47808290 -37630190 + L1M4 LINE L1 3282 3547 -2599 800 133 0 16 chr17 47808291 47808419 -37630061 - FLAM_C SINE Alu -1 142 17 488 288 50 11 chr17 47808427 47808705 -37629775 + L1M4 LINE L1 3556 3844 -2302 298 257 204 18 chr17 47809541 47809654 -37628826 - MIR3 SINE MIR -62 146 13 384 22 0 0 chr17 47809980 47810025 -37628455 + (CA)n Simple_repeat Simple_repeat 1 45 0 1600 164 27 47 chr17 47810918 47811216 -37627264 + AluJo SINE Alu 11 302 -10 294 50 0 0 chr17 47812146 47812186 -37626294 + (CA)n Simple_repeat Simple_repeat 2 41 0 2288 110 0 0 chr17 47813138 47813448 -37625032 - AluSg SINE Alu 0 310 1 210 231 39 77 chr17 47813958 47814036 -37624444 - MIR SINE MIR -72 136 62 2128 109 10 6 chr17 47814326 47814637 -37623843 + AluSp SINE Alu 1 312 -1 1553 185 93 78 chr17 47814812 47815272 -37623208 - MLT1C LTR MaLR 0 467 1 215 333 98 24 chr17 47817707 47817830 -37620650 - MIR SINE MIR -29 233 102 1022 96 0 60 chr17 47817863 47818029 -37620451 - AluSc SINE Alu 0 309 154 279 215 28 93 chr17 47818216 47818323 -37620157 - MER112 DNA MER1_type -160 100 1 186 234 0 43 chr17 47818327 47818374 -37620106 + MIR3 SINE MIR 157 201 -7 184 229 41 57 chr17 47819725 47819847 -37618633 + L2 LINE L2 1610 1729 -1585 192 40 0 0 chr17 47820004 47820029 -37618451 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 303 258 32 32 chr17 47822129 47822222 -37616258 - MIR SINE MIR -112 150 58 632 285 136 14 chr17 47823534 47823748 -37614732 - MIR SINE MIR -1 261 22 2231 99 0 3 chr17 47825362 47825656 -37612824 - AluSq SINE Alu -20 293 1 504 286 121 29 chr17 47827417 47827623 -37610857 - MIR SINE MIR -6 256 32 731 267 162 0 chr17 47831562 47831772 -37606708 + MIR SINE MIR 7 250 -12 2401 88 0 0 chr17 47832697 47833003 -37605477 + AluSq SINE Alu 1 306 -7 2281 101 0 0 chr17 47833012 47833309 -37605171 + AluSq SINE Alu 1 297 -16 1445 196 14 4 chr17 47833312 47833587 -37604893 + AluJb SINE Alu 1 278 -34 904 129 79 6 chr17 47833598 47833776 -37604704 + L1MB3 LINE L1 5992 6182 -1 2240 91 3 26 chr17 47833825 47834134 -37604346 + AluSx SINE Alu 3 304 -8 2115 121 16 3 chr17 47835580 47835887 -37602593 + AluSx SINE Alu 1 311 -1 2147 117 0 3 chr17 47835888 47836186 -37602294 + AluSg SINE Alu 1 297 -13 2203 125 3 3 chr17 47836946 47837258 -37601222 + AluSx SINE Alu 1 312 0 195 129 0 0 chr17 47837259 47837290 -37601190 + (GA)n Simple_repeat Simple_repeat 1 31 0 425 244 113 6 chr17 47837305 47837465 -37601015 - MER58A DNA MER1_type -11 213 37 611 169 13 117 chr17 47837497 47837573 -37600907 + MER5A DNA MER1_type 2 56 -133 2093 123 6 25 chr17 47837573 47837890 -37600590 + AluSx SINE Alu 2 312 0 611 169 13 117 chr17 47837890 47837967 -37600513 + MER5A DNA MER1_type 56 139 -50 242 182 0 18 chr17 47837970 47838025 -37600455 - AluJb SINE Alu -171 131 78 372 127 0 0 chr17 47838027 47838082 -37600398 + MER5A DNA MER1_type 133 187 -2 214 182 45 76 chr17 47838030 47838096 -37600384 - MER5A DNA MER1_type -125 64 1 * 522 243 39 124 chr17 47838425 47838475 -37600005 + MIR SINE MIR 8 61 -201 2193 108 0 0 chr17 47838475 47838771 -37599709 - AluSx SINE Alu -16 296 1 522 243 39 124 chr17 47838771 47838979 -37599501 + MIR SINE MIR 61 244 -18 294 312 142 7 chr17 47838979 47839120 -37599360 - L2 LINE L2 0 3313 3154 1430 181 38 11 chr17 47840400 47840666 -37597814 + AluJo SINE Alu 30 302 -10 575 156 52 0 chr17 47840669 47840765 -37597715 - FLAM_A SINE Alu -9 133 33 364 228 13 0 chr17 47840981 47841060 -37597420 + MER5A DNA MER1_type 30 109 -80 304 260 123 58 chr17 47841093 47841247 -37597233 + L2 LINE L2 2935 3098 -174 243 162 15 29 chr17 47841293 47841361 -37597119 + CT-rich Low_complexity Low_complexity 1 67 0 2241 97 10 10 chr17 47841405 47841714 -37596766 - AluSx SINE Alu -3 309 1 1009 151 6 0 chr17 47841714 47841873 -37596607 - AluJb SINE Alu -10 302 143 181 111 56 0 chr17 47841928 47841964 -37596516 + L2 LINE L2 3235 3272 0 400 310 90 90 chr17 47842556 47842943 -37595537 - L3b LINE CR1 -22 1561 1175 226 91 0 0 chr17 47843931 47843964 -37594516 + U2 snRNA snRNA 1 33 -155 526 268 73 12 chr17 47847005 47847169 -37591311 - L2 LINE L2 -23 3290 3117 210 204 19 19 chr17 47847687 47847741 -37590739 - MIR SINE MIR -86 122 69 303 234 106 0 chr17 47848407 47848501 -37589979 - MIR SINE MIR -72 190 87 1716 179 0 10 chr17 47849642 47849950 -37588530 + AluJo SINE Alu 1 305 -7 181 335 85 43 chr17 47850002 47850190 -37588290 - MIR3 SINE MIR -7 201 6 1815 146 9 0 chr17 47850286 47850621 -37587859 - L1 LINE L1 -1549 4597 4260 2328 96 3 3 chr17 47850622 47850935 -37587545 + AluSp SINE Alu 1 313 0 218 204 23 0 chr17 47853645 47853689 -37584791 + (CA)n Simple_repeat Simple_repeat 2 46 0 274 165 0 129 chr17 47857449 47857534 -37580946 - MER5B DNA MER1_type -104 74 1 222 345 68 27 chr17 47857535 47857683 -37580797 - MIR3 SINE MIR -49 159 6 232 378 0 0 chr17 47859651 47859770 -37578710 + C-rich Low_complexity Low_complexity 1 119 0 253 329 105 21 chr17 47860750 47860893 -37577587 + MIR SINE MIR 108 262 0 351 300 75 17 chr17 47860949 47861069 -37577411 + MIR SINE MIR 17 143 -65 545 334 84 6 chr17 47862226 47862454 -37576026 - MIR SINE MIR -13 249 5 384 290 124 24 chr17 47862670 47862839 -37575641 - MIR3 SINE MIR -15 193 8 260 276 0 0 chr17 47863006 47863064 -37575416 - L2 LINE L2 -5 3308 3251 2457 76 0 0 chr17 47963772 47964073 -37474407 + AluSg SINE Alu 3 303 -7 248 51 0 26 chr17 47964984 47965023 -37473457 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 493 107 0 12 chr17 47965019 47965103 -37473377 + (GGA)n Simple_repeat Simple_repeat 2 84 0 211 254 159 0 chr17 47966219 47966282 -37472198 + L2 LINE L2 3241 3313 0 362 307 66 7 chr17 47968258 47968395 -37470085 + MIR3 SINE MIR 49 193 -15 749 256 164 0 chr17 47968720 47968939 -37469541 + MIR SINE MIR 3 257 -5 273 109 0 0 chr17 47969161 47969207 -37469273 + (GA)n Simple_repeat Simple_repeat 1 46 0 841 243 44 0 chr17 47969568 47969749 -37468731 - MIR SINE MIR -10 252 64 210 304 89 0 chr17 47970055 47970134 -37468346 + L2 LINE L2 3204 3289 -24 23 54 0 0 chr17 47970185 47970222 -37468258 + AT_rich Low_complexity Low_complexity 1 37 0 2153 113 0 0 chr17 47970327 47970652 -37467828 + AluSx SINE Alu 1 325 0 1914 151 0 7 chr17 47971462 47971753 -37466727 + AluJb SINE Alu 2 290 -22 185 269 77 0 chr17 47971923 47971975 -37466505 - MIR SINE MIR -50 212 157 314 349 30 47 chr17 47972108 47972277 -37466203 + MER5A DNA MER1_type 17 182 -7 276 310 153 52 chr17 47972565 47972852 -37465628 + L3 LINE CR1 1234 1549 -28 239 281 167 9 chr17 47972929 47973043 -37465437 - MIR3 SINE MIR -66 142 11 328 292 45 0 chr17 47973135 47973224 -37465256 + MER5A DNA MER1_type 44 136 -53 2140 118 0 10 chr17 47974561 47974857 -37463623 + AluSg SINE Alu 1 293 -17 266 347 40 67 chr17 47975608 47975833 -37462647 - L2 LINE L2 -15 3298 3080 207 301 59 59 chr17 47975909 47976045 -37462435 + MIR SINE MIR 117 252 -10 320 309 173 22 chr17 47977163 47977302 -37461178 - L2 LINE L2 -1 3271 3112 181 225 0 0 chr17 47977424 47977464 -37461016 + L2 LINE L2 3274 3313 0 343 374 71 15 chr17 47977642 47977840 -37460640 - L2 LINE L2 -236 3036 2828 815 309 0 5 chr17 47977882 47978102 -37460378 - MIR SINE MIR -25 237 19 561 356 87 35 chr17 47978477 47978904 -37459576 - L2 LINE L2 -515 2799 2351 225 83 0 0 chr17 47978908 47978944 -37459536 - Alu SINE Alu -3 297 262 180 0 0 0 chr17 47978947 47978967 -37459513 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2227 97 0 0 chr17 47978972 47979262 -37459218 - AluSx SINE Alu -2 310 21 1654 146 107 0 chr17 47979398 47979659 -37458821 - AluJo SINE Alu -21 291 3 399 21 0 0 chr17 47980818 47980866 -37457614 + (GA)n Simple_repeat Simple_repeat 1 48 0 204 212 0 94 chr17 47984934 47985019 -37453461 + A-rich Low_complexity Low_complexity 4 80 0 869 153 48 96 chr17 47986561 47986682 -37451798 + MIR SINE MIR 34 139 -123 2180 111 3 0 chr17 47986682 47987003 -37451477 + AluSx SINE Alu 1 312 0 869 153 48 96 chr17 47987003 47987112 -37451368 + MIR SINE MIR 139 252 -10 24 0 0 0 chr17 47987484 47987508 -37450972 + AT_rich Low_complexity Low_complexity 1 24 0 371 289 178 0 chr17 47987542 47987677 -37450803 - MIR3 SINE MIR -11 197 39 275 218 51 51 chr17 47987857 47987935 -37450545 + L2 LINE L2 3195 3272 0 276 185 34 76 chr17 47988840 47988959 -37449521 + L2 LINE L2 3093 3206 -107 2016 143 0 3 chr17 47989276 47989584 -37448896 + AluSx SINE Alu 5 311 -1 1067 22 8 22 chr17 47989903 47990037 -37448443 + AluY SINE Alu 1 132 -179 1800 152 31 3 chr17 47990380 47990669 -37447811 + AluJb SINE Alu 1 297 -15 2032 103 0 4 chr17 47991201 47991464 -37447016 - AluSg SINE Alu -48 262 1 201 178 0 0 chr17 47993109 47993154 -37445326 + GA-rich Low_complexity Low_complexity 2 46 0 405 86 0 0 chr17 47993598 47993656 -37444824 + (TG)n Simple_repeat Simple_repeat 2 59 0 188 222 22 0 chr17 47995516 47995561 -37442919 - L2 LINE L2 0 3313 3268 240 86 0 0 chr17 47996300 47996335 -37442145 + (TA)n Simple_repeat Simple_repeat 1 35 0 198 0 0 0 chr17 47997060 47997082 -37441398 + (TG)n Simple_repeat Simple_repeat 1 22 0 24 32 0 0 chr17 47998004 47998035 -37440445 + AT_rich Low_complexity Low_complexity 1 31 0 300 111 0 0 chr17 47998488 47998533 -37439947 + (T)n Simple_repeat Simple_repeat 1 45 0 25 31 0 0 chr17 48004320 48004352 -37434128 + AT_rich Low_complexity Low_complexity 1 32 0 248 137 20 0 chr17 48005099 48005150 -37433330 + (TA)n Simple_repeat Simple_repeat 1 52 0 342 0 0 0 chr17 48005631 48005669 -37432811 + (CA)n Simple_repeat Simple_repeat 2 39 0 2114 86 50 4 chr17 48006109 48006387 -37432093 + AluSg SINE Alu 1 291 -19 288 0 0 0 chr17 48006387 48006419 -37432061 + (CAAG)n Simple_repeat Simple_repeat 2 33 0 309 100 0 0 chr17 48007003 48007053 -37431427 + (CA)n Simple_repeat Simple_repeat 2 51 0 2579 63 0 16 chr17 48007379 48007695 -37430785 - AluY SINE Alu 0 311 1 324 247 12 12 chr17 48008824 48008905 -37429575 - MIR SINE MIR -111 151 71 2244 111 7 0 chr17 48009379 48009677 -37428803 - AluSx SINE Alu -12 300 1 496 323 142 16 chr17 48009678 48010108 -37428372 + L1M4 LINE L1 4566 5049 -1097 28 29 0 0 chr17 48010660 48010695 -37427785 + AT_rich Low_complexity Low_complexity 1 35 0 2138 77 6 61 chr17 48010697 48011010 -37427470 + AluSp SINE Alu 1 296 -17 31 19 0 38 chr17 48011310 48011336 -37427144 + AT_rich Low_complexity Low_complexity 1 26 -25 2146 113 3 0 chr17 48011336 48011636 -37426844 - AluSg SINE Alu -9 301 1 31 19 0 38 chr17 48011636 48011662 -37426818 + AT_rich Low_complexity Low_complexity 26 51 0 313 252 53 26 chr17 48011779 48011902 -37426578 - L1MC/D LINE L1 -334 5787 5680 22 0 0 0 chr17 48012268 48012290 -37426190 + AT_rich Low_complexity Low_complexity 1 22 0 1753 171 30 13 chr17 48012350 48012655 -37425825 - AluJo SINE Alu 0 312 3 2094 119 7 0 chr17 48013135 48013420 -37425060 - AluSx SINE Alu -18 294 8 2060 141 0 10 chr17 48013540 48013852 -37424628 - AluJb SINE Alu -3 309 1 23 0 0 0 chr17 48014300 48014323 -37424157 + AT_rich Low_complexity Low_complexity 1 23 0 2041 98 24 10 chr17 48014418 48014714 -37423766 - AluSx SINE Alu -12 300 1 319 272 88 15 chr17 48014767 48014903 -37423577 - MER5A DNA MER1_type -1 188 43 1444 148 6 101 chr17 48014928 48015102 -37423378 - AluJo SINE Alu -25 287 98 1897 153 0 23 chr17 48015102 48015402 -37423078 + AluSx SINE Alu 1 293 -19 2352 82 3 0 chr17 48015410 48015704 -37422776 + AluSp SINE Alu 1 295 -18 1444 148 6 101 chr17 48015704 48015837 -37422643 - AluJo SINE Alu -221 91 1 380 339 152 32 chr17 48015861 48016577 -37421903 + L2 LINE L2 1488 2289 -1025 189 107 0 0 chr17 48016735 48016763 -37421717 + (CTG)n Simple_repeat Simple_repeat 2 29 0 493 328 45 63 chr17 48017229 48017516 -37420964 + L2 LINE L2 2943 3224 -48 792 175 71 44 chr17 48018707 48018890 -37419590 - AluJb SINE Alu -123 189 2 185 342 156 25 chr17 48019078 48019277 -37419203 + L2 LINE L2 2993 3217 -55 231 307 208 30 chr17 48019553 48019856 -37418624 - L2 LINE L2 -649 2665 2309 238 258 273 15 chr17 48019859 48019991 -37418489 - MIR SINE MIR -93 169 4 2051 178 59 71 chr17 48021145 48021181 -37417299 - L1ME1 LINE L1 -5 6161 6126 2052 103 0 58 chr17 48021181 48021511 -37416969 + AluSx SINE Alu 1 311 -1 2051 178 59 71 chr17 48021511 48021952 -37416528 - L1ME1 LINE L1 -40 6126 5690 212 346 0 0 chr17 48021954 48022006 -37416474 - MIR SINE MIR -191 71 20 2267 113 3 3 chr17 48022010 48022319 -37416161 - AluSc SINE Alu 0 309 1 22 0 0 0 chr17 48022833 48022855 -37415625 + AT_rich Low_complexity Low_complexity 1 22 0 593 173 14 36 chr17 48023178 48023317 -37415163 - L1MC5 LINE L1 -42 7919 7784 736 168 22 0 chr17 48023344 48023481 -37414999 - L1MD3 LINE L1 -10 7985 7846 1769 184 3 13 chr17 48023487 48023802 -37414678 + AluJo SINE Alu 1 312 0 25 0 0 0 chr17 48024309 48024334 -37414146 + AT_rich Low_complexity Low_complexity 1 25 0 504 228 9 25 chr17 48024353 48024472 -37414008 + MIR SINE MIR 2 119 -89 2315 101 0 0 chr17 48026330 48026626 -37411854 + AluSg SINE Alu 1 296 -14 725 274 37 19 chr17 48026822 48027037 -37411443 + MIR SINE MIR 32 250 -12 2197 87 3 3 chr17 48027813 48028140 -37410340 + AluSg SINE Alu 2 310 0 2178 93 0 0 chr17 48029224 48029541 -37408939 - AluSx SINE Alu 0 330 14 802 176 8 0 chr17 48029621 48029746 -37408734 + FLAM_C SINE Alu 1 126 -17 2301 90 0 26 chr17 48030824 48031134 -37407346 - AluSp SINE Alu -11 302 1 590 196 200 79 chr17 48032138 48032403 -37406077 + MLT1J LTR MaLR 62 358 -153 877 141 0 16 chr17 48032906 48033034 -37405446 - FLAM_C SINE Alu -7 126 1 501 207 30 22 chr17 48033146 48033281 -37405199 + MLT1J LTR MaLR 376 511 0 581 277 11 28 chr17 48033771 48033948 -37404532 + MER5B DNA MER1_type 3 176 -2 225 229 118 111 chr17 48035060 48035204 -37403276 + MIR SINE MIR 59 203 -59 2114 129 10 13 chr17 48036682 48036991 -37401489 - AluSx SINE Alu -4 308 1 972 233 90 59 chr17 48037192 48037244 -37401236 - HAL1 LINE L1 0 2507 2458 703 214 51 0 chr17 48037244 48037361 -37401119 + FLAM_A SINE Alu 1 123 -10 972 233 90 59 chr17 48037361 48037729 -37400751 - HAL1 LINE L1 -49 2458 2074 1140 168 59 30 chr17 48037774 48037976 -37400504 + MER21B LTR ERV1 307 514 -349 2831 196 91 16 chr17 48037993 48038721 -37399759 - HAL1 LINE L1 -475 2032 1251 1993 146 0 3 chr17 48038783 48039241 -37399239 + AluJb SINE Alu 1 457 0 207 162 0 0 chr17 48039241 48039278 -37399202 + GA-rich Low_complexity Low_complexity 2 38 0 2055 95 3 62 chr17 48039795 48040120 -37398360 + AluSq SINE Alu 1 306 -7 1761 155 0 58 chr17 48042497 48042826 -37395654 + AluJo SINE Alu 1 310 -2 560 142 19 0 chr17 48042826 48042932 -37395548 + GA-rich Low_complexity Low_complexity 1 108 0 211 213 147 40 chr17 48043261 48043336 -37395144 - L2 LINE L2 -1 3271 3189 2110 95 0 4 chr17 48043520 48043793 -37394687 + AluSq SINE Alu 1 272 -41 2317 101 3 0 chr17 48044063 48044361 -37394119 + AluSq SINE Alu 1 299 -14 2013 91 62 0 chr17 48044449 48044723 -37393757 - AluSg SINE Alu -19 291 1 473 312 77 6 chr17 48044920 48045090 -37393390 + L2 LINE L2 2435 2616 -698 219 269 54 54 chr17 48045212 48045305 -37393175 + L2 LINE L2 2978 3070 -202 435 358 88 50 chr17 48045331 48045750 -37392730 - L2 LINE L2 0 3272 2838 2084 119 7 3 chr17 48045900 48046057 -37392423 - AluSq SINE Alu -18 295 135 2204 114 7 7 chr17 48046057 48046364 -37392116 - AluSx SINE Alu -5 307 1 2084 119 7 3 chr17 48046364 48046500 -37391980 - AluSq SINE Alu -178 135 1 2314 108 3 0 chr17 48046505 48046811 -37391669 - AluSp SINE Alu -6 307 1 21 0 0 0 chr17 48046836 48046857 -37391623 + AT_rich Low_complexity Low_complexity 1 21 0 644 189 0 41 chr17 48046857 48046979 -37391501 + FLAM_C SINE Alu 1 117 -26 2006 117 28 0 chr17 48046990 48047273 -37391207 - AluSg SINE Alu -19 291 1 2484 80 3 0 chr17 48047310 48047621 -37390859 + AluSp SINE Alu 1 312 -1 1129 116 0 58 chr17 48047635 48047824 -37390656 + AluSg/x SINE Alu 129 306 -4 2216 105 20 0 chr17 48048359 48048663 -37389817 + AluSp SINE Alu 1 310 -3 1941 159 0 0 chr17 48048677 48048967 -37389513 + AluSx SINE Alu 5 294 -18 1847 128 26 30 chr17 48048972 48049277 -37389203 + AluSx SINE Alu 1 304 -8 1952 163 3 0 chr17 48049287 48049594 -37388886 + AluSx SINE Alu 1 308 -4 234 246 0 33 chr17 48049625 48049686 -37388794 + L2 LINE L2 2992 3050 -222 1610 114 126 12 chr17 48049833 48050087 -37388393 + AluSg1 SINE Alu 5 287 -22 1975 139 7 0 chr17 48050405 48050700 -37387780 - AluSx SINE Alu -15 297 1 2103 126 3 19 chr17 48051011 48051321 -37387159 + AluSx SINE Alu 1 305 -7 826 162 0 0 chr17 48051333 48051450 -37387030 + FLAM_C SINE Alu 2 118 -25 2289 77 3 13 chr17 48051494 48051793 -37386687 + AluSq SINE Alu 5 300 -13 245 157 78 0 chr17 48051796 48051847 -37386633 + L1MA7 LINE L1 6236 6290 -1 2201 99 0 7 chr17 48051854 48052156 -37386324 + AluSx SINE Alu 1 300 -12 891 180 82 0 chr17 48052587 48052805 -37385675 + AluJo SINE Alu 84 316 0 244 106 64 21 chr17 48052945 48052992 -37385488 - L2 LINE L2 -2 3270 3222 1592 77 5 0 chr17 48053015 48053211 -37385269 - AluSp SINE Alu -9 304 108 2279 67 3 20 chr17 48053628 48053925 -37384555 - AluSc SINE Alu -17 292 1 2356 78 3 0 chr17 48054380 48054676 -37383804 + AluSg SINE Alu 1 297 -13 26 0 0 0 chr17 48055728 48055754 -37382726 + GC_rich Low_complexity Low_complexity 1 26 0 2269 103 7 0 chr17 48056190 48056491 -37381989 + AluSx SINE Alu 1 303 -9 224 394 20 0 chr17 48056689 48056705 -37381775 + L2 LINE L2 2992 3006 -266 2284 84 3 0 chr17 48056705 48056992 -37381488 + AluSq SINE Alu 6 293 -20 224 394 20 0 chr17 48056992 48057074 -37381406 + L2 LINE L2 3006 3092 -180 266 211 0 0 chr17 48057520 48057572 -37380908 + LTR30 LTR ERV1 1 52 -670 282 125 0 21 chr17 48057572 48057620 -37380860 + LTR12 LTR ERV1 53 99 -615 1724 130 29 148 chr17 48057621 48058099 -37380381 + LTR12 LTR ERV1 60 480 -234 1919 122 35 7 chr17 48058256 48058542 -37379938 - AluSx SINE Alu -10 302 9 1983 144 6 16 chr17 48058565 48058743 -37379737 - AluSg SINE Alu 0 310 135 2061 129 3 0 chr17 48058743 48059038 -37379442 - AluSx SINE Alu -16 296 1 1983 144 6 16 chr17 48059038 48059172 -37379308 - AluSg SINE Alu -175 135 1 1521 203 37 10 chr17 48059174 48059469 -37379011 - AluJb SINE Alu -9 303 1 563 267 79 10 chr17 48059551 48059753 -37378727 - L3 LINE CR1 -202 1375 1160 1190 134 0 0 chr17 48059843 48060007 -37378473 - AluSc SINE Alu -3 306 143 932 164 38 13 chr17 48060017 48060176 -37378304 + AluJo SINE Alu 60 222 -90 1471 100 0 0 chr17 48060197 48060377 -37378103 + AluSg SINE Alu 1 180 -130 505 155 60 17 chr17 48060386 48060502 -37377978 + Charlie1 DNA MER1_type 2008 2128 -633 21 36 0 0 chr17 48060618 48060646 -37377834 + AT_rich Low_complexity Low_complexity 1 28 0 1149 177 0 0 chr17 48060646 48060832 -37377648 + AluJb SINE Alu 113 298 -14 856 180 67 0 chr17 48060834 48061012 -37377468 + Charlie1 DNA MER1_type 2271 2460 -301 2002 134 38 0 chr17 48061013 48061305 -37377175 - AluSq SINE Alu -10 303 1 1562 130 82 24 chr17 48061325 48061618 -37376862 - AluJo SINE Alu -2 310 1 2045 133 3 0 chr17 48063454 48063748 -37374732 - AluSx SINE Alu -12 300 6 2514 71 0 0 chr17 48063783 48064079 -37374401 - AluSc SINE Alu -13 296 1 1657 91 4 9 chr17 48064089 48064319 -37374161 - AluSg/x SINE Alu -3 309 81 2527 67 3 0 chr17 48065887 48066185 -37372295 + AluSp SINE Alu 1 299 -14 650 142 33 17 chr17 48066825 48066945 -37371535 + L2 LINE L2 3190 3311 -2 2362 80 0 23 chr17 48067253 48067553 -37370927 - AluSq SINE Alu -14 299 7 1848 155 6 22 chr17 48068053 48068369 -37370111 - AluJo SINE Alu -1 311 1 2216 114 0 3 chr17 48068380 48068677 -37369803 - AluSx SINE Alu -16 296 1 2118 83 52 7 chr17 48068687 48068976 -37369504 - AluSp SINE Alu -11 302 1 1679 96 0 5 chr17 48068976 48069195 -37369285 - AluSg1 SINE Alu -9 300 83 1946 123 68 7 chr17 48069196 48069488 -37368992 - AluSq SINE Alu -3 310 1 610 144 33 0 chr17 48069488 48069578 -37368902 - AluSg1 SINE Alu -215 94 2 2388 99 0 0 chr17 48069579 48069883 -37368597 - AluSx SINE Alu -8 304 1 1497 161 79 21 chr17 48070450 48070508 -37367972 - AluJo SINE Alu 0 312 259 2159 91 37 3 chr17 48070508 48070804 -37367676 + AluSg1 SINE Alu 2 307 -2 1497 161 79 21 chr17 48070804 48071036 -37367444 - AluJo SINE Alu -53 259 5 2147 123 23 0 chr17 48071085 48071387 -37367093 - AluSg SINE Alu -1 309 1 1145 96 0 57 chr17 48071387 48071564 -37366916 - AluSg/x SINE Alu -16 296 130 2084 125 3 22 chr17 48071565 48071744 -37366736 - AluSq SINE Alu -2 311 130 183 114 0 0 chr17 48071744 48071779 -37366701 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 2370 70 0 13 chr17 48071780 48072078 -37366402 - AluY SINE Alu -17 294 1 2084 125 3 22 chr17 48072078 48072208 -37366272 - AluSq SINE Alu -182 131 6 465 303 131 23 chr17 48072230 48072242 -37366238 + MIR SINE MIR 1 10 -252 1330 186 6 112 chr17 48072242 48072580 -37365900 + AluJo SINE Alu 1 302 0 465 303 131 23 chr17 48072580 48072788 -37365692 + MIR SINE MIR 10 245 -17 2276 85 14 10 chr17 48072820 48073115 -37365365 + AluSg SINE Alu 1 296 -14 2175 119 0 0 chr17 48073965 48074260 -37364220 - AluSx SINE Alu -4 308 14 1952 149 18 81 chr17 48074265 48074709 -37363771 - L1MB7 LINE L1 -9 6175 5760 2501 88 0 3 chr17 48074723 48075029 -37363451 - AluSx SINE Alu -7 305 1 2592 46 3 7 chr17 48075029 48075331 -37363149 - AluY SINE Alu -10 301 1 348 210 0 37 chr17 48075333 48075414 -37363066 - AluJb SINE Alu -170 132 55 293 139 0 0 chr17 48075439 48075482 -37362998 - MER57A LTR ERV1 -66 337 295 1363 164 14 0 chr17 48075515 48075722 -37362758 - AluJo SINE Alu -20 292 83 2202 107 9 35 chr17 48078730 48078913 -37359567 - AluSq SINE Alu -2 311 138 2315 102 0 22 chr17 48078913 48079227 -37359253 - AluSc SINE Alu -1 308 2 2202 107 9 35 chr17 48079227 48079362 -37359118 - AluSq SINE Alu -175 138 1 2266 113 3 0 chr17 48079653 48079955 -37358525 - AluSq SINE Alu -10 303 1 1115 172 51 33 chr17 48081707 48081922 -37356558 + MER20 DNA MER1_type 1 219 0 413 223 43 0 chr17 48082651 48082745 -37355735 - MER94 DNA DNA -35 99 2 240 35 0 0 chr17 48083257 48083286 -37355194 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 191 343 45 45 chr17 48083567 48083701 -37354779 + MIR3 SINE MIR 7 140 -68 1556 87 5 0 chr17 48083824 48084019 -37354461 + AluSg1 SINE Alu 1 196 -113 320 89 0 18 chr17 48084021 48084077 -37354403 + AluSg1 SINE Alu 240 294 -6 2247 105 30 0 chr17 48085277 48085573 -37352907 - AluSc SINE Alu -4 305 1 2655 68 0 0 chr17 48086299 48086609 -37351871 - AluSg SINE Alu 0 310 1 769 258 43 23 chr17 48086651 48086907 -37351573 - MIR SINE MIR 0 262 2 2090 128 13 10 chr17 48087167 48087297 -37351183 + AluSx SINE Alu 5 133 -179 2287 95 0 19 chr17 48087297 48087614 -37350866 + AluSx SINE Alu 1 311 -1 2090 128 13 10 chr17 48087614 48087788 -37350692 + AluSx SINE Alu 133 310 -2 562 277 130 17 chr17 48088447 48088801 -37349679 - L1MC4a LINE L1 -1779 6029 5636 2247 97 3 0 chr17 48088848 48089137 -37349343 - AluSg SINE Alu -20 290 1 2296 108 16 0 chr17 48089218 48089524 -37348956 - AluSx SINE Alu -1 311 1 1783 158 38 14 chr17 48090001 48090292 -37348188 - AluJb SINE Alu -14 298 1 1256 219 124 68 chr17 48090483 48090687 -37347793 + MLT1J LTR MaLR 1 192 -319 2357 98 7 3 chr17 48090687 48090992 -37347488 - AluSg SINE Alu -4 306 1 1256 219 124 68 chr17 48090992 48091197 -37347283 + MLT1J LTR MaLR 192 443 -68 2163 89 44 24 chr17 48091197 48091490 -37346990 - AluSx SINE Alu -13 299 1 1256 219 124 68 chr17 48091490 48091562 -37346918 + MLT1J LTR MaLR 443 510 -1 258 267 53 84 chr17 48092220 48092351 -37346129 - L2 LINE L2 -10 3262 3136 * 422 286 160 24 chr17 48092326 48092539 -37345941 + MIR SINE MIR 21 262 0 2186 97 0 42 chr17 48092727 48092892 -37345588 - AluSx SINE Alu -13 299 151 2456 77 0 0 chr17 48092892 48093191 -37345289 - AluSx SINE Alu -13 299 1 2186 97 0 42 chr17 48093191 48093333 -37345147 - AluSx SINE Alu -161 151 5 2074 123 28 0 chr17 48093416 48093700 -37344780 - AluSg SINE Alu -18 292 1 2278 102 0 3 chr17 48093708 48094002 -37344478 - AluSg SINE Alu -17 293 1 1473 333 79 51 chr17 48094228 48095288 -37343192 + L2 LINE L2 1346 2374 -898 2225 119 0 31 chr17 48095288 48095608 -37342872 - AluSx SINE Alu -2 310 1 1473 333 79 51 chr17 48095608 48095896 -37342584 + L2 LINE L2 2374 2652 -620 2031 133 26 3 chr17 48095896 48096198 -37342282 - AluSq SINE Alu -4 309 1 1473 333 79 51 chr17 48096198 48096702 -37341778 + L2 LINE L2 2652 3266 -6 2405 70 3 0 chr17 48096702 48097017 -37341463 + AluSq SINE Alu 1 316 0 1643 153 60 50 chr17 48097323 48097624 -37340856 - AluJo SINE Alu -8 304 1 1531 147 13 74 chr17 48097711 48098010 -37340470 - AluJb SINE Alu -8 304 24 2350 94 0 7 chr17 48100732 48101030 -37337450 + AluSg SINE Alu 1 296 -14 2411 68 3 7 chr17 48101156 48101450 -37337030 - AluSq SINE Alu -20 293 1 22 0 0 0 chr17 48103290 48103312 -37335168 + AT_rich Low_complexity Low_complexity 1 22 0 273 57 0 0 chr17 48107546 48107581 -37330899 + (CA)n Simple_repeat Simple_repeat 2 36 0 222 37 0 0 chr17 48108416 48108443 -37330037 + (A)n Simple_repeat Simple_repeat 1 27 0 2236 102 0 30 chr17 48109298 48109603 -37328877 + AluSx SINE Alu 1 296 -16 234 0 0 0 chr17 48109627 48109653 -37328827 + (ATG)n Simple_repeat Simple_repeat 2 27 0 2178 98 35 0 chr17 48109653 48109939 -37328541 - AluSx SINE Alu -16 296 1 2185 117 13 0 chr17 48110096 48110394 -37328086 + AluSx SINE Alu 1 302 -10 183 175 75 0 chr17 48111453 48111493 -37326987 - L2 LINE L2 -9 3304 3262 180 267 0 0 chr17 48111460 48111505 -37326975 - MIR SINE MIR -13 249 205 * 259 277 113 21 chr17 48111536 48111677 -37326803 - MIR SINE MIR -25 237 84 2439 78 3 0 chr17 48111760 48112056 -37326424 - AluSx SINE Alu -15 297 1 2265 103 3 0 chr17 48112058 48112350 -37326130 - AluSx SINE Alu -19 293 1 2263 116 3 0 chr17 48112417 48112720 -37325760 + AluSp SINE Alu 1 304 -9 2493 57 0 66 chr17 48112786 48113119 -37325361 + AluY SINE Alu 1 311 0 2534 52 3 3 chr17 48113200 48113507 -37324973 + AluY SINE Alu 1 307 -4 253 303 26 0 chr17 48113811 48113887 -37324593 - MIR3 SINE MIR -16 192 115 1850 151 9 41 chr17 48114640 48114958 -37323522 - AluJo SINE Alu -4 308 1 1963 124 7 3 chr17 48116464 48116787 -37321693 - AluSx SINE Alu 0 324 1 26 0 0 0 chr17 48117332 48117358 -37321122 + AT_rich Low_complexity Low_complexity 1 26 0 181 74 0 0 chr17 48118112 48118139 -37320341 + MIR SINE MIR 34 60 -148 388 325 118 11 chr17 48119469 48119749 -37318731 - L2 LINE L2 -6 3307 2998 2401 99 3 0 chr17 48119909 48120221 -37318259 - AluSp SINE Alu 0 313 1 2061 151 0 3 chr17 48121383 48121687 -37316793 - AluJo SINE Alu -9 303 1 2280 95 0 0 chr17 48122896 48123210 -37315270 + AluSx SINE Alu 1 314 0 205 297 22 11 chr17 48124247 48124338 -37314142 + GA-rich Low_complexity Low_complexity 2 93 0 1936 152 14 3 chr17 48125231 48125528 -37312952 - AluSx SINE Alu -12 300 1 2238 106 3 19 chr17 48125615 48125926 -37312554 - AluSp SINE Alu -6 307 2 463 262 33 8 chr17 48125993 48126115 -37312365 - L2 LINE L2 -1 3271 3147 261 0 0 0 chr17 48126256 48126285 -37312195 + (TG)n Simple_repeat Simple_repeat 1 29 0 2224 116 3 0 chr17 48126302 48126605 -37311875 + AluSg SINE Alu 1 304 -6 203 247 32 75 chr17 48126741 48126834 -37311646 + L2 LINE L2 3180 3268 -45 1920 154 0 33 chr17 48127415 48127720 -37310760 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr17 48127736 48127757 -37310723 + AT_rich Low_complexity Low_complexity 1 21 0 183 336 139 0 chr17 48130211 48130348 -37308132 - L2 LINE L2 -176 3096 2941 198 0 0 0 chr17 48130969 48130991 -37307489 + (TGG)n Simple_repeat Simple_repeat 2 23 0 657 243 19 53 chr17 48131830 48132036 -37306444 - MIR SINE MIR 0 262 64 370 267 112 9 chr17 48134357 48134473 -37304007 + L2 LINE L2 3186 3313 0 191 269 54 54 chr17 48134499 48134592 -37303888 - L2 LINE L2 -202 3070 2978 415 314 82 0 chr17 48134725 48134884 -37303596 - L2 LINE L2 -708 2606 2435 2032 91 62 0 chr17 48135081 48135355 -37303125 + AluSg SINE Alu 1 291 -19 2052 124 7 3 chr17 48135443 48135741 -37302739 - AluSq SINE Alu -14 299 1 243 292 0 0 chr17 48135817 48135882 -37302598 - MER5B DNA MER1_type 0 178 114 2395 77 0 3 chr17 48135882 48136180 -37302300 + AluY SINE Alu 1 297 -14 425 141 24 0 chr17 48136283 48136368 -37302112 - AluS SINE Alu -4 306 220 249 171 229 14 chr17 48136406 48136476 -37302004 + L1MC/D LINE L1 5785 5869 -1939 798 112 0 0 chr17 48136498 48136605 -37301875 + U6 snRNA snRNA 1 107 0 2439 64 0 0 chr17 48136640 48136943 -37301537 - AluSg SINE Alu 0 304 2 2176 101 0 7 chr17 48136958 48137254 -37301226 - AluSg SINE Alu -16 294 1 2192 125 0 6 chr17 48137380 48137691 -37300789 - AluSc SINE Alu 0 309 1 2285 81 7 14 chr17 48137691 48137986 -37300494 - AluSg SINE Alu -15 295 3 187 179 51 0 chr17 48137987 48138026 -37300454 + MER5B DNA MER1_type 113 153 -25 2356 99 0 0 chr17 48138073 48138375 -37300105 - AluY SINE Alu -9 302 1 2199 123 0 19 chr17 48138393 48138709 -37299771 - AluSx SINE Alu -2 310 1 1950 149 0 16 chr17 48139184 48139499 -37298981 - AluSx SINE Alu -2 310 1 236 272 105 53 chr17 48139956 48140070 -37298410 + MIR SINE MIR 78 197 -65 2606 60 0 0 chr17 48140352 48140654 -37297826 - AluY SINE Alu -9 302 1 240 193 0 114 chr17 48140655 48140681 -37297799 + MIR SINE MIR 169 196 -66 1217 155 74 94 chr17 48140681 48140775 -37297705 + AluJo SINE Alu 1 95 -217 2276 82 13 10 chr17 48140775 48141080 -37297400 + AluSg SINE Alu 2 307 -3 1217 155 74 94 chr17 48141080 48141282 -37297198 + AluJo SINE Alu 95 291 -21 240 193 0 114 chr17 48141282 48141343 -37297137 + MIR SINE MIR 196 246 -16 294 297 149 57 chr17 48141363 48141442 -37297038 + HAL1 LINE L1 2 72 -2435 2248 88 0 20 chr17 48141442 48141737 -37296743 - AluSq SINE Alu -19 294 6 294 297 149 57 chr17 48141737 48141953 -37296527 + HAL1 LINE L1 72 324 -2183 883 170 0 0 chr17 48141973 48142114 -37296366 + FLAM_C SINE Alu 1 141 -2 2292 111 3 0 chr17 48142117 48142415 -37296065 + AluSp SINE Alu 1 299 -14 2086 119 17 7 chr17 48142447 48142740 -37295740 + AluSx SINE Alu 3 298 -14 2586 74 0 0 chr17 48142751 48143062 -37295418 - AluY SINE Alu 0 311 1 611 153 20 0 chr17 48143071 48143169 -37295311 - AluJ SINE Alu -22 290 191 940 142 35 0 chr17 48143169 48143310 -37295170 - AluJ SINE Alu -162 150 5 2192 118 0 10 chr17 48143541 48143838 -37294642 + AluSq SINE Alu 1 294 -19 823 139 0 0 chr17 48144078 48144200 -37294280 + AluJo SINE Alu 16 137 -175 387 0 0 0 chr17 48144288 48144331 -37294149 + (TA)n Simple_repeat Simple_repeat 2 44 0 2564 74 3 0 chr17 48144333 48144642 -37293838 - AluSg SINE Alu 0 310 1 1791 146 22 4 chr17 48144947 48145222 -37293258 + AluSx SINE Alu 3 282 -30 1788 181 17 3 chr17 48145493 48145785 -37292695 + AluJb SINE Alu 1 296 -16 2067 124 11 0 chr17 48145877 48146159 -37292321 + AluSx SINE Alu 1 285 -27 2236 94 7 29 chr17 48146186 48146495 -37291985 + AluSg SINE Alu 1 302 -8 1980 144 0 3 chr17 48146497 48146789 -37291691 + AluSg SINE Alu 3 293 -17 2389 81 3 0 chr17 48146791 48147087 -37291393 + AluY SINE Alu 1 297 -14 462 129 0 0 chr17 48147195 48147265 -37291215 - AluS SINE Alu -15 296 227 1122 116 0 0 chr17 48147265 48147411 -37291069 - AluSq/x SINE Alu -166 146 1 648 226 0 0 chr17 48147458 48147582 -37290898 - FLAM_C SINE Alu -18 125 2 1916 96 0 105 chr17 48147693 48148026 -37290454 + AluY SINE Alu 1 298 -13 1360 165 129 22 chr17 48148588 48148860 -37289620 - AluJo SINE Alu -1 301 1 203 259 17 0 chr17 48149237 48149295 -37289185 + GA-rich Low_complexity Low_complexity 3 61 0 2266 95 3 0 chr17 48149790 48150085 -37288395 + AluY SINE Alu 1 296 -15 2341 90 10 3 chr17 48151437 48151738 -37286742 - AluSx SINE Alu -9 303 1 2013 124 24 10 chr17 48152143 48152434 -37286046 - AluSg SINE Alu -15 295 1 2382 69 14 0 chr17 48152489 48152777 -37285703 - AluY SINE Alu -19 292 1 2180 108 0 44 chr17 48152972 48153287 -37285193 + AluSx SINE Alu 1 301 -11 2340 93 7 7 chr17 48155667 48155967 -37282513 - AluSx SINE Alu -12 300 1 2148 94 34 3 chr17 48155978 48156275 -37282205 - AluSc SINE Alu -3 306 1 2318 111 7 0 chr17 48156938 48157244 -37281236 - AluSx SINE Alu -4 308 1 1570 150 22 70 chr17 48157600 48157914 -37280566 - AluJo SINE Alu -13 299 1 1581 148 57 0 chr17 48159205 48159488 -37278992 + AluSx SINE Alu 1 299 -13 2354 71 0 3 chr17 48159493 48159790 -37278690 + AluY SINE Alu 1 296 -15 2186 79 0 46 chr17 48161205 48161508 -37276972 - AluSg SINE Alu -21 289 1 321 235 82 0 chr17 48161654 48161739 -37276741 + MER7A DNA MER2_type 1 90 -256 448 111 0 0 chr17 48161739 48161802 -37276678 - Alu SINE Alu -16 296 234 1224 153 128 8 chr17 48161842 48162077 -37276403 + MER7A DNA MER2_type 84 346 0 2117 85 10 7 chr17 48162192 48162486 -37275994 - AluSq SINE Alu -18 295 1 1616 152 54 0 chr17 48162829 48163106 -37275374 + AluJb SINE Alu 1 292 -20 222 91 0 0 chr17 48165246 48165279 -37273201 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 333 186 0 0 chr17 48166403 48166473 -37272007 + GA-rich Low_complexity Low_complexity 3 72 0 368 260 160 20 chr17 48167274 48167424 -37271056 + MIR3 SINE MIR 4 174 -34 215 186 0 68 chr17 48172031 48172090 -37266390 + (CATCC)n Simple_repeat Simple_repeat 3 57 0 1062 187 23 9 chr17 48172397 48172611 -37265869 - MER20 DNA MER1_type -2 217 1 2258 88 0 0 chr17 48174791 48175086 -37263394 - AluSx SINE Alu -17 295 1 2289 80 0 0 chr17 48175603 48175903 -37262577 + AluSp SINE Alu 14 313 0 206 238 0 0 chr17 48176185 48176227 -37262253 + (CA)n Simple_repeat Simple_repeat 2 43 0 471 320 80 11 chr17 48177810 48177985 -37260495 - MER5A DNA MER1_type -2 187 1 278 193 105 0 chr17 48178296 48178378 -37260102 - FLAM_A SINE Alu -41 92 10 1261 148 175 4 chr17 48178716 48178973 -37259507 + AluJo SINE Alu 1 301 -1 1874 150 3 10 chr17 48180024 48180331 -37258149 + AluJb SINE Alu 1 305 -7 789 198 23 40 chr17 48180650 48180827 -37257653 + MER5B DNA MER1_type 4 177 -1 216 0 0 0 chr17 48180855 48180879 -37257601 + (A)n Simple_repeat Simple_repeat 1 24 0 2144 103 7 0 chr17 48180928 48181218 -37257262 - AluSx SINE Alu -20 292 1 2310 91 0 0 chr17 48182521 48182818 -37255662 + AluSx SINE Alu 1 297 -15 2204 106 3 3 chr17 48182849 48183160 -37255320 + AluSq SINE Alu 1 311 -2 724 252 30 116 chr17 48183732 48184093 -37254387 + L2 LINE L2 2971 3300 -13 1930 144 16 7 chr17 48184110 48184415 -37254065 - AluSx SINE Alu -4 308 1 308 341 6 102 chr17 48184512 48184552 -37253928 - L2 LINE L2 0 3272 3230 2401 71 0 0 chr17 48184552 48184849 -37253631 + AluSc SINE Alu 1 297 -12 308 341 6 102 chr17 48184849 48184910 -37253570 - L2 LINE L2 -42 3230 3165 1590 165 0 75 chr17 48184910 48185124 -37253356 + AluJo SINE Alu 1 229 -83 192 111 0 0 chr17 48185124 48185160 -37253320 + (TG)n Simple_repeat Simple_repeat 1 36 0 2021 84 0 7 chr17 48185170 48185443 -37253037 - AluSg SINE Alu -39 271 1 1590 165 0 75 chr17 48185443 48185550 -37252930 + AluJo SINE Alu 238 308 -4 308 341 6 102 chr17 48185550 48185614 -37252866 - L2 LINE L2 -107 3165 3122 763 136 9 0 chr17 48185624 48185734 -37252746 + AluJ SINE Alu 2 112 -200 201 74 0 0 chr17 48185745 48185772 -37252708 + (TCC)n Simple_repeat Simple_repeat 3 29 0 1655 188 10 10 chr17 48185783 48186092 -37252388 - AluJo SINE Alu -1 311 3 1029 149 6 0 chr17 48186128 48186296 -37252184 + AluJ SINE Alu 120 288 -24 276 270 148 28 chr17 48186530 48186711 -37251769 + MIR3 SINE MIR 6 207 -55 294 309 11 0 chr17 48187292 48187386 -37251094 + GA-rich Low_complexity Low_complexity 1 95 0 229 314 29 29 chr17 48187305 48187515 -37250965 + G-rich Low_complexity Low_complexity 1 210 0 * 31 44 0 0 chr17 48187536 48187581 -37250899 + GC_rich Low_complexity Low_complexity 1 45 0 406 304 9 0 chr17 48188829 48188944 -37249536 - MIR3 SINE MIR -8 200 85 24 32 0 0 chr17 48188973 48189004 -37249476 + AT_rich Low_complexity Low_complexity 1 31 0 2455 80 0 3 chr17 48189224 48189538 -37248942 + AluSq SINE Alu 1 313 0 1709 123 3 92 chr17 48189555 48189871 -37248609 + AluJb SINE Alu 1 288 -24 414 180 29 101 chr17 48190203 48190280 -37248200 + MIR SINE MIR 32 96 -166 2155 91 0 10 chr17 48190280 48190578 -37247902 - AluSx SINE Alu -17 295 1 414 180 29 101 chr17 48190578 48190639 -37247841 + MIR SINE MIR 96 160 -102 2193 89 10 0 chr17 48190873 48191164 -37247316 + AluSp SINE Alu 1 294 -19 332 254 138 58 chr17 48193503 48193641 -37244839 + MIR SINE MIR 60 208 -54 2376 69 0 13 chr17 48193803 48194108 -37244372 - AluY SINE Alu -10 301 1 425 276 40 26 chr17 48194147 48194299 -37244181 - MIR SINE MIR -107 155 2 640 232 33 66 chr17 48194356 48194537 -37243943 - MER69A DNA AcHobo -2 175 1 2174 102 0 10 chr17 48194930 48194948 -37243532 - AluSg SINE Alu -8 302 285 369 0 0 0 chr17 48194948 48194989 -37243491 + (TG)n Simple_repeat Simple_repeat 2 42 0 2174 102 0 10 chr17 48194989 48195275 -37243205 - AluSg SINE Alu -25 285 1 21 0 0 31 chr17 48195286 48195300 -37243180 + AT_rich Low_complexity Low_complexity 1 14 -17 2124 103 3 0 chr17 48195300 48195592 -37242888 - AluSx SINE Alu -19 293 1 21 0 0 31 chr17 48195592 48195609 -37242871 + AT_rich Low_complexity Low_complexity 14 31 0 519 287 134 22 chr17 48197746 48197969 -37240511 + MIR SINE MIR 8 255 -7 180 0 0 0 chr17 48199139 48199159 -37239321 + (TG)n Simple_repeat Simple_repeat 2 21 0 194 152 130 0 chr17 48202153 48202199 -37236281 - L2 LINE L2 0 3272 3221 322 198 142 0 chr17 48202313 48202353 -37236127 + L1ME3 LINE L1 6042 6075 -87 2337 70 7 3 chr17 48202353 48202653 -37235827 + AluSq SINE Alu 1 301 -12 322 198 142 0 chr17 48202653 48202718 -37235762 + L1ME3 LINE L1 6075 6162 0 22 0 0 0 chr17 48202940 48202962 -37235518 + AT_rich Low_complexity Low_complexity 1 22 0 333 333 13 33 chr17 48202976 48203126 -37235354 - L2 LINE L2 -4 3268 3122 1844 152 0 49 chr17 48203252 48203580 -37234900 + AluJb SINE Alu 1 312 0 1256 156 0 15 chr17 48203815 48204020 -37234460 - AluJb SINE Alu -81 231 30 289 256 166 16 chr17 48204042 48204167 -37234313 - MIR SINE MIR -61 147 9 2009 98 32 0 chr17 48204189 48204490 -37233990 + AluSp SINE Alu 1 310 0 277 343 30 0 chr17 48204495 48204594 -37233886 - L2 LINE L2 -526 2788 2687 515 230 184 0 chr17 48204633 48204785 -37233695 + MARNA DNA Mariner 182 361 -225 226 292 42 0 chr17 48204831 48204903 -37233577 + MARNA DNA Mariner 471 545 -41 2241 77 6 49 chr17 48204911 48205238 -37233242 + AluSq SINE Alu 1 313 0 1570 162 0 45 chr17 48205404 48205718 -37232762 - AluJb SINE Alu -12 300 1 508 165 0 0 chr17 48205718 48205797 -37232683 - AluJo SINE Alu -13 299 221 1182 129 11 0 chr17 48205797 48205975 -37232505 - AluJo SINE Alu -124 188 9 2117 86 4 4 chr17 48206364 48206663 -37231817 + AluSg SINE Alu 1 299 0 2125 128 0 0 chr17 48207067 48207371 -37231109 + AluSx SINE Alu 1 304 -8 385 267 50 33 chr17 48207530 48207650 -37230830 - MIR3 SINE MIR -72 136 15 1845 133 14 0 chr17 48207769 48208047 -37230433 - AluSx SINE Alu -2 310 29 1878 152 3 0 chr17 48208072 48208413 -37230067 - AluSx SINE Alu 0 312 2 270 0 0 0 chr17 48209148 48209178 -37229302 + (A)n Simple_repeat Simple_repeat 1 30 0 709 165 16 0 chr17 48209253 48209374 -37229106 + AluSg/x SINE Alu 175 297 -15 332 91 0 0 chr17 48209374 48209418 -37229062 + Alu SINE Alu 1 44 -257 37 0 0 0 chr17 48209427 48209464 -37229016 + AT_rich Low_complexity Low_complexity 1 37 0 2012 120 10 0 chr17 48209527 48209818 -37228662 + AluSx SINE Alu 5 298 -14 478 233 75 15 chr17 48211435 48211568 -37226912 + MIR3 SINE MIR 61 201 -7 228 135 0 0 chr17 48214130 48214167 -37224313 + (A)n Simple_repeat Simple_repeat 1 37 0 2102 119 0 3 chr17 48214312 48214615 -37223865 + AluSx SINE Alu 5 306 -6 920 286 12 4 chr17 48214742 48214997 -37223483 + MIR SINE MIR 6 262 0 757 184 0 0 chr17 48215438 48215563 -37222917 + FLAM_A SINE Alu 10 134 -8 1155 164 36 0 chr17 48215567 48215786 -37222694 + AluJo SINE Alu 84 310 -2 2228 100 0 0 chr17 48215820 48216119 -37222361 + AluSx SINE Alu 1 299 -13 391 244 6 125 chr17 48216189 48216349 -37222131 + MARNA DNA Mariner 338 478 -108 1518 222 2 56 chr17 48216349 48216795 -37221685 + L1MC4 LINE L1 7621 8042 0 2244 94 0 28 chr17 48216856 48217176 -37221304 - AluY SINE Alu 0 311 1 1146 299 68 100 chr17 48217210 48217584 -37220896 + L3 LINE CR1 627 1011 -566 1826 115 52 0 chr17 48217584 48217871 -37220609 + AluSx SINE Alu 1 302 -10 1146 299 68 100 chr17 48217871 48218293 -37220187 + L3 LINE CR1 1011 1389 -188 2397 71 0 0 chr17 48218293 48218604 -37219876 + AluY SINE Alu 1 311 0 1146 299 68 100 chr17 48218604 48218787 -37219693 + L3 LINE CR1 1389 1576 -1 243 0 0 0 chr17 48218797 48218824 -37219656 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 1966 143 10 0 chr17 48219068 48219369 -37219111 + AluSx SINE Alu 2 305 -7 2232 104 0 19 chr17 48219369 48219687 -37218793 + AluSx SINE Alu 1 312 0 1332 152 14 5 chr17 48220511 48220728 -37217752 - AluJb SINE Alu -93 219 1 654 286 48 0 chr17 48220752 48220958 -37217522 + MIR SINE MIR 35 250 -12 215 245 19 0 chr17 48221098 48221151 -37217329 + GA-rich Low_complexity Low_complexity 3 56 0 263 106 43 0 chr17 48222851 48222898 -37215582 + CT-rich Low_complexity Low_complexity 1 49 0 1444 175 53 4 chr17 48222902 48223045 -37215435 - AluJb SINE Alu -36 276 142 234 0 0 0 chr17 48223045 48223071 -37215409 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 1444 175 53 4 chr17 48223071 48223190 -37215290 - AluJb SINE Alu -170 142 1 354 358 46 17 chr17 48223242 48223269 -37215211 + L2 LINE L2 3095 3120 -152 1835 143 0 20 chr17 48223269 48223569 -37214911 - AluJb SINE Alu -8 304 11 354 358 46 17 chr17 48223569 48223714 -37214766 + L2 LINE L2 3120 3272 0 189 0 0 0 chr17 48223830 48223851 -37214629 + (T)n Simple_repeat Simple_repeat 1 21 0 2282 78 0 16 chr17 48224062 48224393 -37214087 - AluY SINE Alu 0 311 1 2133 72 55 3 chr17 48224395 48224685 -37213795 - AluY SINE Alu -6 305 1 278 0 54 0 chr17 48225719 48225756 -37212724 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1823 120 52 0 chr17 48225758 48226025 -37212455 - AluSx SINE Alu -31 281 1 798 255 44 15 chr17 48226063 48226267 -37212213 + MER63A DNA MER1_type 1 210 0 1994 141 0 3 chr17 48226274 48226578 -37211902 - AluJb SINE Alu -9 303 1 2210 87 7 17 chr17 48226605 48226905 -37211575 + AluSx SINE Alu 1 297 -15 279 277 75 0 chr17 48226919 48227033 -37211447 - MIR SINE MIR -67 141 33 318 291 164 8 chr17 48227500 48227634 -37210846 + MIR3 SINE MIR 2 156 -52 2186 102 0 3 chr17 48227642 48227945 -37210535 - AluSq SINE Alu -11 302 1 2255 68 0 14 chr17 48227977 48228300 -37210180 + AluY SINE Alu 2 311 0 340 349 128 0 chr17 48229396 48229591 -37208889 + MIR SINE MIR 7 226 -36 535 283 117 14 chr17 48231067 48231290 -37207190 + MIR SINE MIR 2 247 -15 1919 147 0 3 chr17 48231331 48231637 -37206843 + AluJb SINE Alu 4 308 -4 185 32 0 65 chr17 48232469 48232500 -37205980 + (TAA)n Simple_repeat Simple_repeat 2 30 0 232 357 0 0 chr17 48232500 48232584 -37205896 - MIR SINE MIR -12 250 167 252 306 241 18 chr17 48232786 48232956 -37205524 - MIR SINE MIR -19 243 36 1983 156 0 0 chr17 48233004 48233312 -37205168 - AluSg SINE Alu -2 308 1 300 289 0 21 chr17 48233879 48233976 -37204504 + GA-rich Low_complexity Low_complexity 3 97 0 546 305 139 14 chr17 48234267 48234490 -37203990 - L3 LINE CR1 -34 1543 1293 2248 90 7 0 chr17 48234750 48235051 -37203429 + AluSx SINE Alu 1 303 -9 590 147 88 0 chr17 48236121 48236223 -37202257 + L1MB3 LINE L1 6064 6174 -9 977 105 0 0 chr17 48236654 48236787 -37201693 - AluSq/x SINE Alu -179 133 1 1868 144 13 3 chr17 48236797 48237096 -37201384 - AluJo SINE Alu -10 302 1 751 43 11 0 chr17 48238158 48238252 -37200228 - AluJ/FLAM SINE Alu -216 96 2 2004 106 39 0 chr17 48239004 48239288 -37199192 - AluSg SINE Alu -15 295 1 524 247 137 31 chr17 48239343 48239379 -37199101 - MIR SINE MIR -9 253 222 2264 88 3 3 chr17 48239379 48239685 -37198795 - AluSq SINE Alu -7 306 1 524 247 137 31 chr17 48239685 48239875 -37198605 - MIR SINE MIR -40 222 3 853 155 0 0 chr17 48239968 48240097 -37198383 + FLAM_C SINE Alu 1 129 -4 2159 112 7 0 chr17 48240106 48240409 -37198071 + AluSg SINE Alu 2 306 -4 1711 97 144 0 chr17 48240414 48240671 -37197809 + AluSq SINE Alu 1 294 -9 305 289 10 39 chr17 48241606 48241710 -37196770 - MIR SINE MIR 0 262 162 1745 169 19 3 chr17 48244726 48245033 -37193447 + AluJo SINE Alu 1 312 0 1417 268 110 7 chr17 48245639 48246223 -37192257 + L2 LINE L2 2673 3309 -4 2253 86 3 3 chr17 48246923 48247225 -37191255 + AluSp SINE Alu 1 302 -11 2082 101 14 10 chr17 48247716 48247847 -37190633 + AluSx SINE Alu 1 130 -182 2410 55 3 3 chr17 48247847 48248154 -37190326 + AluY SINE Alu 1 307 -4 2082 101 14 10 chr17 48248154 48248319 -37190161 + AluSx SINE Alu 130 298 -14 1602 180 3 17 chr17 48248631 48248926 -37189554 + AluJb SINE Alu 1 291 -21 422 328 115 0 chr17 48250241 48250424 -37188056 + MIR SINE MIR 59 262 0 410 250 245 15 chr17 48252379 48252579 -37185901 + MIR SINE MIR 17 262 0 251 238 0 32 chr17 48252584 48252647 -37185833 + MIR SINE MIR 199 259 -3 187 293 40 13 chr17 48253205 48253280 -37185200 + MIR SINE MIR 7 83 -179 2059 86 0 77 chr17 48253284 48253608 -37184872 - AluSp SINE Alu -13 300 2 448 198 0 0 chr17 48254889 48254975 -37183505 - MER45A DNA AcHobo 0 178 93 482 308 145 43 chr17 48255020 48255701 -37182779 - L2 LINE L2 -452 2862 2112 2506 55 0 3 chr17 48255707 48256019 -37182461 - AluY SINE Alu 0 311 1 239 264 75 47 chr17 48256148 48256254 -37182226 + MIR SINE MIR 83 191 -71 1764 108 0 89 chr17 48256343 48256479 -37182001 + AluSx SINE Alu 1 95 -217 2367 91 0 0 chr17 48256479 48256788 -37181692 + AluSg SINE Alu 2 310 0 1764 108 0 89 chr17 48256788 48256965 -37181515 + AluSx SINE Alu 95 286 -26 392 313 48 7 chr17 48257912 48258059 -37180421 - MIR SINE MIR -29 233 81 2329 87 0 6 chr17 48258061 48258372 -37180108 + AluSc SINE Alu 1 309 0 1964 105 34 0 chr17 48258397 48258691 -37179789 + AluSx SINE Alu 1 304 -8 214 369 0 12 chr17 48258691 48258775 -37179705 - MIR SINE MIR -174 88 6 2334 101 0 0 chr17 48259218 48259526 -37178954 - AluSg SINE Alu -1 309 2 332 319 22 36 chr17 48259541 48259679 -37178801 + L2 LINE L2 3136 3271 -1 2032 102 7 32 chr17 48260410 48260693 -37177787 + AluSx SINE Alu 22 297 -15 224 264 64 112 chr17 48260804 48261054 -37177426 - L2 LINE L2 -220 3052 2815 729 163 0 8 chr17 48261160 48261289 -37177191 + FRAM SINE Alu 1 40 0 931 135 0 0 chr17 48261413 48261546 -37176934 + FLAM_C SINE Alu 1 133 0 228 182 0 0 chr17 48261548 48261592 -37176888 + GA-rich Low_complexity Low_complexity 4 47 0 1271 179 174 52 chr17 48261658 48261733 -37176747 - MLT1C LTR MaLR -5 462 398 2397 70 7 7 chr17 48261733 48262034 -37176446 + AluY SINE Alu 1 301 -10 1271 179 174 52 chr17 48262034 48262365 -37176115 - MLT1C LTR MaLR -69 398 6 2096 128 0 0 chr17 48262411 48262700 -37175780 + AluSx SINE Alu 6 294 -18 373 330 100 3 chr17 48262798 48263145 -37175335 - LTR16A LTR ERVL -51 399 3 1483 218 98 30 chr17 48263173 48263645 -37174835 + MLT1D LTR MaLR 2 505 0 243 304 25 0 chr17 48263696 48263775 -37174705 + MIR SINE MIR 154 234 -28 2266 112 3 0 chr17 48264344 48264639 -37173841 - AluSp SINE Alu -17 296 1 1905 147 3 31 chr17 48268804 48269123 -37169357 - AluSx SINE Alu -2 310 1 2223 117 3 0 chr17 48269572 48269870 -37168610 + AluSp SINE Alu 1 299 -14 2493 57 0 66 chr17 48269936 48270269 -37168211 + AluY SINE Alu 1 311 0 2526 52 3 3 chr17 48270352 48270658 -37167822 + AluY SINE Alu 1 306 -5 253 303 26 0 chr17 48270962 48271038 -37167442 - MIR3 SINE MIR -16 192 115 1850 151 9 41 chr17 48271791 48272109 -37166371 - AluJo SINE Alu -4 308 1 1963 124 7 3 chr17 48273616 48273939 -37164541 - AluSx SINE Alu 0 324 1 26 0 0 0 chr17 48274484 48274510 -37163970 + AT_rich Low_complexity Low_complexity 1 26 0 181 74 0 0 chr17 48275264 48275291 -37163189 + MIR SINE MIR 34 60 -148 388 325 118 11 chr17 48276621 48276901 -37161579 - L2 LINE L2 -6 3307 2998 2418 96 3 0 chr17 48277057 48277369 -37161111 - AluSp SINE Alu 0 313 1 2052 152 0 3 chr17 48278531 48278834 -37159646 - AluJo SINE Alu -10 302 1 2280 95 0 0 chr17 48280043 48280357 -37158123 + AluSx SINE Alu 1 314 0 205 297 22 11 chr17 48281393 48281484 -37156996 + GA-rich Low_complexity Low_complexity 2 93 0 1936 152 14 3 chr17 48282377 48282674 -37155806 - AluSx SINE Alu -12 300 1 2222 107 3 19 chr17 48282762 48283071 -37155409 - AluSp SINE Alu -8 305 2 463 262 33 8 chr17 48283138 48283260 -37155220 - L2 LINE L2 -1 3271 3147 279 0 0 0 chr17 48283401 48283432 -37155048 + (TG)n Simple_repeat Simple_repeat 1 31 0 2224 116 3 0 chr17 48283449 48283752 -37154728 + AluSg SINE Alu 1 304 -6 203 247 32 75 chr17 48283888 48283981 -37154499 + L2 LINE L2 3180 3268 -45 1920 154 0 33 chr17 48284562 48284867 -37153613 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr17 48284883 48284904 -37153576 + AT_rich Low_complexity Low_complexity 1 21 0 183 336 139 0 chr17 48287358 48287495 -37150985 - L2 LINE L2 -176 3096 2941 198 0 0 0 chr17 48288116 48288138 -37150342 + (TGG)n Simple_repeat Simple_repeat 2 23 0 657 243 19 53 chr17 48288977 48289183 -37149297 - MIR SINE MIR 0 262 64 201 156 0 0 chr17 48291859 48291891 -37146589 + CT-rich Low_complexity Low_complexity 1 32 0 405 0 0 0 chr17 48298124 48298169 -37140311 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2027 90 63 11 chr17 48298171 48298439 -37140041 - AluSg SINE Alu -28 282 1 1692 191 7 3 chr17 48300082 48300385 -37138095 + AluJo SINE Alu 9 312 0 1874 131 46 7 chr17 48300386 48300696 -37137784 + AluSx SINE Alu 1 312 0 383 255 132 0 chr17 48300792 48300898 -37137582 - L2 LINE L2 0 3272 3153 214 224 90 30 chr17 48300953 48301020 -37137460 + L2 LINE L2 3220 3290 -23 2305 108 0 16 chr17 48301332 48301647 -37136833 - AluSx SINE Alu -2 310 1 2351 70 7 20 chr17 48301780 48302081 -37136399 - AluY SINE Alu -14 297 1 2214 116 0 3 chr17 48302373 48302676 -37135804 + AluSg SINE Alu 1 302 -8 1015 127 13 13 chr17 48303704 48303861 -37134619 + FRAM SINE Alu 1 157 -19 2302 112 0 3 chr17 48304708 48305012 -37133468 - AluSp SINE Alu -10 303 1 468 281 0 0 chr17 48307726 48307840 -37130640 - MIR SINE MIR -72 190 77 1701 128 28 3 chr17 48308067 48308349 -37130131 - L1PA16 LINE L1 0 6166 5878 854 93 0 0 chr17 48308349 48308456 -37130024 - U6 snRNA snRNA 0 107 1 2334 100 0 3 chr17 48308646 48308947 -37129533 + AluSg SINE Alu 1 300 -10 1606 156 52 0 chr17 48309105 48309374 -37129106 + AluSx SINE Alu 30 312 0 2726 33 0 0 chr17 48309843 48310147 -37128333 + AluY SINE Alu 1 304 -7 455 325 89 46 chr17 48310844 48311246 -37127234 + L2 LINE L2 2671 3090 -182 1816 89 0 36 chr17 48311682 48311930 -37126550 + AluSg SINE Alu 6 244 -66 554 139 0 0 chr17 48312030 48312109 -37126371 - AluJ/FLAM SINE Alu -233 79 1 2118 141 0 0 chr17 48313518 48313815 -37124665 - AluJb SINE Alu -15 297 1 1552 177 4 0 chr17 48314429 48314689 -37123791 + AluJb SINE Alu 42 302 -10 2316 221 24 68 chr17 48317015 48317598 -37120882 + L1ME3A LINE L1 5440 6047 -123 2383 97 13 0 chr17 48317598 48317906 -37120574 + AluSx SINE Alu 1 312 0 2316 221 24 68 chr17 48317906 48318014 -37120466 + L1ME3A LINE L1 6047 6099 -71 2100 112 0 0 chr17 48318014 48318313 -37120167 + AluSg SINE Alu 5 303 0 2316 221 24 68 chr17 48318313 48318375 -37120105 + L1ME3A LINE L1 6099 6162 -8 273 296 61 97 chr17 48318529 48318725 -37119755 + L3b LINE CR1 1180 1368 -215 1945 112 0 0 chr17 48319511 48319769 -37118711 - AluSg SINE Alu -20 290 33 1244 207 76 3 chr17 48319869 48320183 -37118297 - L1ME LINE L1 -370 5794 5458 1007 173 12 25 chr17 48320204 48320447 -37118033 - L1M4 LINE L1 -632 5552 5313 249 314 78 42 chr17 48320876 48321067 -37117413 + L2 LINE L2 2687 2884 -430 1189 177 26 0 chr17 48371197 48371429 -37067051 - L1MB3 LINE L1 -261 5922 5685 1860 144 149 11 chr17 48371600 48371976 -37066504 - MSTA LTR MaLR 0 428 1 276 297 16 55 chr17 48372049 48372231 -37066249 - L2 LINE L2 -619 2695 2521 1954 173 27 22 chr17 48372244 48372655 -37065825 + MSTB2 LTR MaLR 15 427 -30 236 103 26 0 chr17 48372758 48372797 -37065683 + L1MA9 LINE L1 5241 5280 -866 2019 131 21 31 chr17 48372813 48373195 -37065285 + L1MA9 LINE L1 5935 6312 0 21 95 0 0 chr17 48373555 48373618 -37064862 + AT_rich Low_complexity Low_complexity 1 63 0 22 0 0 0 chr17 48374183 48374205 -37064275 + AT_rich Low_complexity Low_complexity 1 22 0 299 301 10 62 chr17 48375640 48375833 -37062647 - MER117 DNA MER1_type -9 188 6 246 214 24 71 chr17 48376161 48376245 -37062235 - MER116 DNA Mariner 0 80 1 772 196 0 0 chr17 48376512 48376645 -37061835 + FLAM_C SINE Alu 1 133 -10 995 182 77 62 chr17 48376759 48376871 -37061609 + MER33 DNA MER1_type 1 98 -2487 2083 104 18 0 chr17 48376871 48377294 -37061186 + AluSq SINE Alu 1 428 0 995 182 77 62 chr17 48377294 48377505 -37060975 + MER33 DNA MER1_type 98 318 -6 1742 168 44 0 chr17 48377981 48378279 -37060201 - AluJo SINE Alu -1 311 1 557 216 0 0 chr17 48379315 48379412 -37059068 + FLAM_C SINE Alu 22 118 -25 1634 160 71 7 chr17 48379447 48379728 -37058752 + AluJo SINE Alu 2 300 -12 261 233 2 26 chr17 48379729 48379806 -37058674 + MLT1J2 LTR MaLR 259 328 -122 1123 182 5 10 chr17 48379980 48380172 -37058308 - AluJb SINE Alu -15 297 107 671 41 20 0 chr17 48380181 48380279 -37058201 + THE1A-int LTR MaLR 1481 1580 0 2873 53 3 3 chr17 48380279 48380634 -37057846 + THE1A LTR MaLR 1 355 0 260 373 59 67 chr17 48381354 48381605 -37056875 - L2 LINE L2 -1843 1471 1223 1884 169 3 19 chr17 48381605 48381918 -37056562 + AluJb SINE Alu 1 308 -4 260 373 59 67 chr17 48381918 48382071 -37056409 - L2 LINE L2 -2091 1223 1070 344 385 66 7 chr17 48382250 48382536 -37055944 + L2 LINE L2 2373 2675 -639 573 242 200 12 chr17 48382556 48382772 -37055708 + MIR SINE MIR 7 260 -2 424 340 40 0 chr17 48385133 48385283 -37053197 + MIR SINE MIR 68 223 -39 1656 184 0 35 chr17 48385364 48385679 -37052801 + AluJo SINE Alu 1 304 -8 204 125 0 0 chr17 48385690 48385722 -37052758 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 229 182 0 73 chr17 48385845 48385900 -37052580 + L2 LINE L2 3263 3313 0 764 270 110 0 chr17 48385964 48386164 -37052316 + MIR SINE MIR 37 258 -4 1215 46 7 0 chr17 48386198 48386351 -37052129 + L1PA5 LINE L1 5997 6150 -4 1276 176 5 0 chr17 48386366 48386582 -37051898 - U3 snRNA snRNA 0 217 1 294 362 69 9 chr17 48386998 48387114 -37051366 + L2 LINE L2 3146 3268 -4 24 32 0 0 chr17 48387436 48387467 -37051013 + AT_rich Low_complexity Low_complexity 1 31 0 2253 88 0 29 chr17 48387710 48388016 -37050464 - AluSx SINE Alu -10 302 6 585 249 55 6 chr17 48388353 48388534 -37049946 - MLT1L LTR MaLR -5 610 421 285 227 0 0 chr17 48388692 48388758 -37049722 - MLT1L LTR MaLR -546 69 4 542 317 113 58 chr17 48388764 48389455 -37049025 - L2 LINE L2 -971 2343 1615 308 334 153 43 chr17 48389468 48389914 -37048566 - L2 LINE L2 -2645 669 175 634 276 54 18 chr17 48391025 48391246 -37047234 - MIR SINE MIR -14 248 20 831 208 108 49 chr17 48391409 48391817 -37046663 - L1MC5 LINE L1 -32 7929 7498 1878 160 6 10 chr17 48391876 48392189 -37046291 - AluJb SINE Alu 0 312 1 205 308 15 0 chr17 48392615 48392680 -37045800 - MIR SINE MIR -106 156 91 1231 142 38 5 chr17 48394070 48394282 -37044198 - MER20 DNA MER1_type 0 219 1 2155 122 3 13 chr17 48394602 48394913 -37043567 - AluSx SINE Alu -4 308 1 2288 96 0 0 chr17 48395239 48395532 -37042948 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr17 48395670 48395693 -37042787 + AT_rich Low_complexity Low_complexity 1 23 0 484 283 4 98 chr17 48395696 48395940 -37042540 - MIR SINE MIR -11 251 31 302 279 44 83 chr17 48396546 48396775 -37041705 + HAL1b LINE L1 389 608 -740 691 183 59 20 chr17 48396821 48396974 -37041506 + MER3 DNA MER1_type 51 209 0 2353 95 0 7 chr17 48397918 48398223 -37040257 - AluSg SINE Alu -7 303 1 471 220 17 34 chr17 48398736 48398854 -37039626 + MER5A DNA MER1_type 40 155 -34 320 346 142 11 chr17 48399524 48399784 -37038696 + L2 LINE L2 2807 3100 -172 4655 168 22 15 chr17 48400128 48400336 -37038144 + L1MB8 LINE L1 4498 4703 -1475 2280 126 0 0 chr17 48400336 48400646 -37037834 + AluSx SINE Alu 1 310 -2 4655 168 22 15 chr17 48400646 48401646 -37036834 + L1MB8 LINE L1 4703 5720 -458 2104 139 0 0 chr17 48401646 48401941 -37036539 - AluSx SINE Alu -16 296 2 4655 168 22 15 chr17 48401941 48402403 -37036077 + L1MB8 LINE L1 5720 6178 0 1469 157 30 41 chr17 48402415 48402683 -37035797 + AluJo SINE Alu 22 286 -26 192 77 0 0 chr17 48402735 48402761 -37035719 + (TA)n Simple_repeat Simple_repeat 2 27 0 449 317 49 45 chr17 48402785 48403009 -37035471 + HAL1b LINE L1 301 525 -823 2188 117 0 7 chr17 48403117 48403425 -37035055 + AluSx SINE Alu 1 306 -6 30 27 0 0 chr17 48403443 48403480 -37035000 + AT_rich Low_complexity Low_complexity 1 37 0 2128 116 13 0 chr17 48403483 48403784 -37034696 + AluSp SINE Alu 1 305 -8 23 33 0 0 chr17 48403984 48404014 -37034466 + AT_rich Low_complexity Low_complexity 1 30 0 416 183 54 0 chr17 48404244 48404337 -37034143 - L1MC4 LINE L1 -142 7900 7803 2134 95 18 0 chr17 48404356 48404640 -37033840 + AluSx SINE Alu 1 289 -23 246 216 0 20 chr17 48405840 48405891 -37032589 + L2 LINE L2 3219 3268 -4 1811 176 0 0 chr17 48406463 48406796 -37031684 + AluJb SINE Alu 1 333 0 180 200 73 109 chr17 48407144 48407183 -37031297 - L2 LINE L2 -17 3255 3216 203 86 0 29 chr17 48407183 48407218 -37031262 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1952 146 7 3 chr17 48407218 48407505 -37030975 - AluSx SINE Alu -24 288 1 180 200 73 109 chr17 48407505 48407519 -37030961 - L2 LINE L2 -54 3218 3203 * 1021 205 4 66 chr17 48407506 48407535 -37030945 - MIR SINE MIR -32 230 201 2324 89 7 0 chr17 48407535 48407837 -37030643 - AluSp SINE Alu -8 305 2 1021 205 4 66 chr17 48407837 48407885 -37030595 - MIR SINE MIR -61 201 152 1811 172 0 27 chr17 48407885 48408182 -37030298 - AluJo SINE Alu -23 289 1 1021 205 4 66 chr17 48408182 48408297 -37030183 - MIR SINE MIR -110 152 52 1933 135 37 45 chr17 48408297 48408675 -37029805 - THE1C LTR MaLR 0 375 1 1021 205 4 66 chr17 48408675 48408724 -37029756 - MIR SINE MIR -210 52 2 22 0 0 0 chr17 48408739 48408761 -37029719 + AT_rich Low_complexity Low_complexity 1 22 0 1781 179 3 19 chr17 48409266 48409573 -37028907 - AluJb SINE Alu -10 302 1 1486 134 61 20 chr17 48411023 48411138 -37027342 - AluJb SINE Alu -55 257 148 2158 116 0 0 chr17 48411138 48411442 -37027038 - AluSq SINE Alu 0 304 1 1486 134 61 20 chr17 48411442 48411572 -37026908 - AluJb SINE Alu -164 148 1 628 355 66 11 chr17 48411583 48411932 -37026548 + L1M4 LINE L1 2786 3153 -2993 1917 148 21 3 chr17 48412153 48412443 -37026037 + AluJb SINE Alu 1 295 -17 532 324 150 29 chr17 48412786 48413206 -37025274 + L1M4 LINE L1 3367 3837 -2309 226 185 346 12 chr17 48413653 48413734 -37024746 - MIR SINE MIR -92 170 63 6913 149 22 37 chr17 48413734 48413959 -37024521 + L1MC3 LINE L1 5602 5829 -1956 2092 125 3 13 chr17 48413959 48414263 -37024217 + AluJb SINE Alu 1 301 -11 6913 149 22 37 chr17 48414263 48415221 -37023259 + L1MC3 LINE L1 5829 6800 -985 2297 107 0 25 chr17 48415221 48415538 -37022942 + AluSx SINE Alu 1 309 -3 6913 149 22 37 chr17 48415538 48415694 -37022786 + L1MC3 LINE L1 6800 6957 -828 1977 139 4 0 chr17 48415694 48416015 -37022465 + AluSx SINE Alu 1 322 0 6913 149 22 37 chr17 48416015 48416206 -37022274 + L1MC3 LINE L1 6957 7245 -540 472 244 17 17 chr17 48416308 48416427 -37022053 - MLT1J2 LTR MaLR -281 169 51 327 104 0 0 chr17 48416433 48416481 -37021999 + (TG)n Simple_repeat Simple_repeat 1 48 0 390 324 0 10 chr17 48416904 48417006 -37021474 - MIR SINE MIR -87 121 21 625 279 74 31 chr17 48417175 48417405 -37021075 - MIR SINE MIR 0 262 25 442 295 0 16 chr17 48417618 48417747 -37020733 - MIR3 SINE MIR -18 190 64 220 203 16 47 chr17 48418108 48418172 -37020308 + CT-rich Low_complexity Low_complexity 2 63 0 230 230 113 64 chr17 48418456 48418599 -37019881 - MIR SINE MIR -64 144 16 261 0 0 0 chr17 48418690 48418719 -37019761 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1881 132 3 28 chr17 48418722 48419011 -37019469 - AluSx SINE Alu -30 282 1 368 319 7 0 chr17 48419426 48419564 -37018916 + (CCCTAA)n Simple_repeat Simple_repeat 3 141 0 1419 160 46 26 chr17 48419688 48419994 -37018486 + L1MC3 LINE L1 7474 7785 0 215 197 0 66 chr17 48420047 48420108 -37018372 - L2 LINE L2 0 3272 3216 378 188 137 17 chr17 48420113 48420230 -37018250 + L1ME4a LINE L1 5990 6120 -1 456 179 48 0 chr17 48420960 48421044 -37017436 + L1M4 LINE L1 3622 3709 -2437 2244 110 3 0 chr17 48421064 48421355 -37017125 + AluSp SINE Alu 1 292 -21 180 0 0 0 chr17 48421355 48421375 -37017105 + (TA)n Simple_repeat Simple_repeat 2 21 0 468 298 76 105 chr17 48421858 48422304 -37016176 - L2 LINE L2 0 3272 2840 26 0 0 0 chr17 48423167 48423193 -37015287 + AT_rich Low_complexity Low_complexity 1 26 0 1950 138 0 0 chr17 48425188 48425497 -37012983 + AluSx SINE Alu 1 309 0 317 282 18 9 chr17 48425505 48425615 -37012865 + L1ME LINE L1 5669 5779 -342 1538 196 25 7 chr17 48425741 48426021 -37012459 + AluJo SINE Alu 5 289 -23 25 75 0 0 chr17 48426076 48426129 -37012351 + AT_rich Low_complexity Low_complexity 1 53 0 2514 181 138 35 chr17 48426141 48426778 -37011702 + L1ME2 LINE L1 5452 6154 -10 233 164 0 36 chr17 48426807 48426862 -37011618 + GA-rich Low_complexity Low_complexity 1 53 0 531 77 39 13 chr17 48426871 48426949 -37011531 - MADE1 DNA Mariner 0 80 1 2225 98 7 3 chr17 48427012 48427307 -37011173 - AluSx SINE Alu -16 296 1 529 283 73 39 chr17 48427732 48427937 -37010543 + L1MC4a LINE L1 5617 5828 -1980 1701 155 29 18 chr17 48428218 48428542 -37009938 + AluJo SINE Alu 1 327 0 658 296 30 20 chr17 48428647 48428850 -37009630 + MIR3 SINE MIR 1 205 -3 1743 168 3 20 chr17 48428976 48429279 -37009201 - AluJo SINE Alu -14 298 1 284 259 0 0 chr17 48429634 48429692 -37008788 + MIR3 SINE MIR 151 208 0 6169 55 22 13 chr17 48429827 48430591 -37007889 + L1PA8 LINE L1 5402 6172 0 681 261 111 0 chr17 48430875 48431055 -37007425 - MIR SINE MIR -51 211 12 372 321 38 38 chr17 48431458 48431589 -37006891 + L2 LINE L2 3141 3271 -1 1842 129 0 0 chr17 48431606 48431862 -37006618 + AluSx SINE Alu 6 261 -51 347 291 64 0 chr17 48432533 48432643 -37005837 - MIR3 SINE MIR -33 175 59 216 0 0 0 chr17 48432679 48432703 -37005777 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2182 110 0 3 chr17 48432705 48432997 -37005483 - AluSg SINE Alu -19 291 1 245 342 13 0 chr17 48433132 48433208 -37005272 - LTR67 LTR ERVL -367 190 114 233 185 31 62 chr17 48433159 48433224 -37005256 - MLT1J LTR MaLR -354 157 95 * 1105 139 10 46 chr17 48433415 48433609 -37004871 - AluJb SINE Alu -6 306 120 2283 89 0 0 chr17 48435024 48435329 -37003151 + AluSg SINE Alu 1 305 0 2118 122 18 0 chr17 48437668 48437954 -37000526 + AluSx SINE Alu 6 296 -16 186 71 0 0 chr17 48437964 48437992 -37000488 + (CAA)n Simple_repeat Simple_repeat 2 29 0 253 257 86 0 chr17 48439071 48439141 -36999339 + MER20 DNA MER1_type 34 109 -110 910 30 0 0 chr17 48439146 48439246 -36999234 + HY3 scRNA scRNA 1 100 -1 560 150 24 79 chr17 48439269 48439396 -36999084 + MER20 DNA MER1_type 100 219 0 1473 145 22 104 chr17 48439461 48439801 -36998679 + AluYb8 SINE Alu 1 314 0 2115 106 3 3 chr17 48439810 48440116 -36998364 + AluSx SINE Alu 1 306 0 1752 179 7 13 chr17 48440121 48440428 -36998052 + AluJb SINE Alu 1 305 -7 907 203 0 0 chr17 48440430 48440615 -36997865 + AluJb SINE Alu 136 320 0 472 95 0 0 chr17 48440619 48440682 -36997798 + AluY SINE Alu 1 63 -255 1534 32 16 11 chr17 48440682 48440890 -36997590 + AluY SINE Alu 99 307 0 217 216 23 0 chr17 48440904 48440992 -36997488 + (CCCTAA)n Simple_repeat Simple_repeat 2 91 0 973 208 6 12 chr17 48441388 48441561 -36996919 - FAM SINE Alu -3 172 1 326 300 83 67 chr17 48441562 48441742 -36996738 - MIR SINE MIR -72 190 8 1846 134 7 14 chr17 48442272 48442589 -36995891 + AluSx SINE Alu 1 315 0 357 253 191 6 chr17 48442736 48442898 -36995582 + MIR3 SINE MIR 15 206 -2 547 228 54 42 chr17 48444217 48444384 -36994096 - MIR3 SINE MIR -14 194 26 2827 161 27 44 chr17 48444884 48445262 -36993218 - L1MB2 LINE L1 -4 6179 5839 2210 93 3 10 chr17 48445262 48445573 -36992907 - AluY SINE Alu -2 309 1 2827 161 27 44 chr17 48445573 48445835 -36992645 - L1MB2 LINE L1 -344 5839 5574 294 259 188 9 chr17 48445837 48445949 -36992531 + MIR SINE MIR 103 234 -28 329 275 110 28 chr17 48445973 48446082 -36992398 + L2 LINE L2 3155 3272 0 2291 100 13 0 chr17 48446116 48446416 -36992064 + AluSq SINE Alu 1 304 -9 187 305 17 0 chr17 48446423 48446482 -36991998 + L2 LINE L2 3251 3310 -3 258 324 0 0 chr17 48447188 48447259 -36991221 + L2 LINE L2 3243 3313 0 1249 158 8 73 chr17 48447466 48447700 -36990780 - MER20 DNA MER1_type 0 219 1 2528 64 0 0 chr17 48447808 48448106 -36990374 + AluY SINE Alu 1 298 -13 2068 130 3 0 chr17 48448109 48448402 -36990078 + AluSg SINE Alu 1 294 -16 180 351 26 13 chr17 48448678 48448755 -36989725 - MIR SINE MIR -80 128 51 2194 95 0 3 chr17 48449311 48449625 -36988855 + AluSx SINE Alu 1 313 0 329 213 103 29 chr17 48449627 48449711 -36988769 - L1ME2 LINE L1 -109 6055 5956 1000 143 39 100 chr17 48449711 48449942 -36988538 - MER20 DNA MER1_type 0 219 3 329 213 103 29 chr17 48449942 48449993 -36988487 - L1ME2 LINE L1 -208 5956 5910 2066 138 0 3 chr17 48450587 48450884 -36987596 + AluSx SINE Alu 1 296 -16 836 257 32 23 chr17 48450897 48451115 -36987365 + MIR SINE MIR 31 250 -12 193 256 0 0 chr17 48451165 48451208 -36987272 + L3 LINE CR1 1323 1365 -212 436 106 48 39 chr17 48451246 48451350 -36987130 - L1MC5 LINE L1 -47 7914 7810 284 274 97 88 chr17 48451422 48451567 -36986913 + MIR SINE MIR 16 162 -64 1763 183 3 0 chr17 48453059 48453348 -36985132 - AluJo SINE Alu -21 291 2 767 303 101 38 chr17 48453453 48453819 -36984661 - L3 LINE CR1 -12 1565 1177 387 296 18 93 chr17 48453819 48453865 -36984615 + MIR SINE MIR 17 65 -197 2340 99 3 0 chr17 48453865 48454167 -36984313 - AluSp SINE Alu -10 303 1 387 296 18 93 chr17 48454167 48454321 -36984159 + MIR SINE MIR 65 202 -60 301 336 146 36 chr17 48454464 48454738 -36983742 - L2 LINE L2 -35 3237 2934 2145 97 42 0 chr17 48454794 48455082 -36983398 + AluSc SINE Alu 1 300 -9 5151 139 32 34 chr17 48455092 48455416 -36983064 + L1MB2 LINE L1 5171 5494 -677 2253 82 0 4 chr17 48455416 48455697 -36982783 + AluSq SINE Alu 1 280 -33 359 68 17 0 chr17 48455699 48455758 -36982722 + (CAA)n Simple_repeat Simple_repeat 1 60 0 2138 128 7 0 chr17 48455758 48456054 -36982426 + AluSx SINE Alu 1 298 -14 5151 139 32 34 chr17 48456054 48456726 -36981754 + L1MB2 LINE L1 5493 6170 -1 350 303 162 4 chr17 48456719 48456990 -36981490 + L1MC4 LINE L1 7693 8006 -36 * 22 35 0 0 chr17 48457136 48457165 -36981315 + AT_rich Low_complexity Low_complexity 1 29 0 2101 134 0 0 chr17 48457165 48457455 -36981025 - AluSx SINE Alu -22 290 1 261 346 9 9 chr17 48457475 48457582 -36980898 + MIR SINE MIR 83 189 -73 578 189 160 0 chr17 48457960 48458066 -36980414 - AluJb SINE Alu -188 124 2 346 271 16 39 chr17 48458085 48458214 -36980266 - L1M LINE L1 -779 5383 5258 659 249 133 44 chr17 48458919 48458952 -36979528 + MLT1L LTR MaLR 110 139 -476 1821 212 65 0 chr17 48458952 48459292 -36979188 - MLT1A1 LTR MaLR 0 365 4 659 249 133 44 chr17 48459292 48459637 -36978843 + MLT1L LTR MaLR 139 590 -25 2280 218 128 58 chr17 48459736 48460508 -36977972 + LTR1B LTR ERV1 1 826 0 318 258 0 0 chr17 48460571 48460633 -36977847 - MER5B DNA MER1_type -65 113 52 432 308 93 16 chr17 48461067 48461249 -36977231 - MER117 DNA MER1_type 0 197 2 366 349 8 23 chr17 48461269 48461398 -36977082 + MIR3 SINE MIR 33 159 -49 817 237 19 28 chr17 48462448 48462663 -36975817 - MIR SINE MIR 0 262 50 2711 94 43 10 chr17 48462856 48463250 -36975230 + L1MA2 LINE L1 5894 6300 -4 361 243 108 47 chr17 48463313 48463461 -36975019 - MIR3 SINE MIR -46 162 6 2233 124 3 0 chr17 48463564 48463871 -36974609 - AluSx SINE Alu -4 308 1 530 184 29 0 chr17 48464027 48464130 -36974350 + MER5A DNA MER1_type 1 106 -83 723 173 0 144 chr17 48464136 48464344 -36974136 - MER5A DNA MER1_type -3 186 9 445 295 74 46 chr17 48464972 48465088 -36973392 - L3b LINE CR1 -41 1542 1416 520 225 143 97 chr17 48465088 48465479 -36973001 + MLT1I LTR MaLR 1 409 0 445 295 74 46 chr17 48465479 48465579 -36972901 - L3b LINE CR1 -167 1416 1320 2098 126 7 3 chr17 48465837 48466130 -36972350 + AluSg SINE Alu 1 294 -16 370 259 12 12 chr17 48466241 48466326 -36972154 + L2 LINE L2 3136 3220 -52 501 136 0 0 chr17 48466428 48466494 -36971986 - AluS SINE Alu -246 67 2 2185 176 20 8 chr17 48466633 48466990 -36971490 - MLT1A1 LTR MaLR 0 365 5 1201 114 0 0 chr17 48467101 48467259 -36971221 + AluSg/x SINE Alu 133 290 -20 225 309 124 36 chr17 48467311 48467586 -36970894 - L2 LINE L2 -672 2642 2344 1798 164 3 10 chr17 48467653 48467965 -36970515 + AluJb SINE Alu 1 310 -2 220 68 23 23 chr17 48468192 48468236 -36970244 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 255 143 0 0 chr17 48468238 48468273 -36970207 - Alu SINE Alu -266 36 2 314 305 38 9 chr17 48469259 48469364 -36969116 - L2 LINE L2 -5 3308 3201 390 270 8 143 chr17 48469455 48469572 -36968908 + MIR SINE MIR 19 81 -181 1760 184 3 13 chr17 48469572 48469881 -36968599 - AluJb SINE Alu -6 306 1 390 270 8 143 chr17 48469881 48470031 -36968449 + MIR SINE MIR 81 250 -12 1987 114 11 4 chr17 48470385 48470666 -36967814 + AluSx SINE Alu 3 285 -27 204 40 0 0 chr17 48470666 48470691 -36967789 + (GGAGAA)n Simple_repeat Simple_repeat 5 29 0 2192 100 0 30 chr17 48471473 48471773 -36966707 + AluSg1 SINE Alu 2 292 -17 412 125 263 0 chr17 48472097 48472177 -36966303 + MER5A DNA MER1_type 9 109 -80 513 188 19 97 chr17 48472279 48472433 -36966047 + LTR33 LTR ERVL 1 142 -379 2355 101 0 0 chr17 48472482 48472780 -36965700 + AluSx SINE Alu 1 298 -14 1100 249 126 7 chr17 48472862 48473171 -36965309 + LTR33 LTR ERVL 174 519 -2 274 228 98 73 chr17 48473427 48473517 -36964963 - MER63 DNA MER1_type -11 1050 955 2256 121 0 0 chr17 48473517 48473823 -36964657 + AluSq SINE Alu 1 306 -7 274 228 98 73 chr17 48473823 48473855 -36964625 - MER63 DNA MER1_type -106 955 925 204 241 0 0 chr17 48473856 48473914 -36964566 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 1542 125 0 0 chr17 48473953 48474161 -36964319 - AluSx SINE Alu -99 213 6 454 168 75 28 chr17 48474173 48474280 -36964200 - MER63 DNA MER1_type -128 933 822 2000 134 24 0 chr17 48474466 48474757 -36963723 - AluSx SINE Alu -14 298 1 270 209 139 35 chr17 48474877 48474963 -36963517 + MIR3 SINE MIR 68 162 -46 241 331 113 0 chr17 48475393 48475517 -36962963 - MIR SINE MIR -60 202 65 1805 149 43 17 chr17 48475518 48475819 -36962661 + AluJb SINE Alu 1 309 -3 505 295 9 47 chr17 48476100 48476316 -36962164 - MIR SINE MIR -27 235 30 341 203 0 0 chr17 48478951 48479010 -36959470 - L2 LINE L2 -10 3262 3204 393 268 66 96 chr17 48479245 48479399 -36959081 + MIR SINE MIR 6 154 -108 1759 120 0 4 chr17 48479399 48479641 -36958839 + AluSx SINE Alu 57 297 -15 393 268 66 96 chr17 48479641 48479684 -36958796 + MIR SINE MIR 154 197 -65 461 241 161 43 chr17 48479695 48479794 -36958686 - MER5A DNA MER1_type 0 189 103 1921 161 0 16 chr17 48479794 48480105 -36958375 - AluJo SINE Alu -5 307 2 461 241 161 43 chr17 48480105 48480167 -36958313 - MER5A DNA MER1_type -86 103 9 265 324 39 10 chr17 48481922 48482024 -36956456 - MIR SINE MIR -86 122 18 997 115 0 0 chr17 48482960 48483090 -36955390 - FLAM_C SINE Alu -12 131 2 692 232 170 18 chr17 48483410 48483634 -36954846 + MIR SINE MIR 5 262 0 1144 163 4 79 chr17 48484606 48484858 -36953622 - AluJb SINE Alu -79 233 1 5607 121 28 30 chr17 48485090 48485796 -36952684 - L1PA16 LINE L1 0 6166 5461 1771 132 39 7 chr17 48485796 48486076 -36952404 + AluJb SINE Alu 1 289 -23 5607 121 28 30 chr17 48486076 48486276 -36952204 - L1PA16 LINE L1 -705 5461 5262 216 361 21 21 chr17 48486344 48486441 -36952039 + L2 LINE L2 3176 3272 0 512 243 124 34 chr17 48486597 48486774 -36951706 + MIR SINE MIR 70 262 0 1973 170 0 0 chr17 48486873 48487184 -36951296 - AluJb SINE Alu -1 311 1 1699 119 88 8 chr17 48487204 48487506 -36950974 - AluSg SINE Alu 0 323 1 2070 148 10 0 chr17 48488459 48488757 -36949723 - AluJb SINE Alu -11 301 1 205 138 17 52 chr17 48488813 48488871 -36949609 + (TA)n Simple_repeat Simple_repeat 1 56 0 1207 122 38 42 chr17 48488872 48489085 -36949395 - L1MA9 LINE L1 -74 6238 6027 1585 61 5 10 chr17 48490355 48490553 -36947927 - MER107 DNA MER1_type 0 197 1 476 303 127 40 chr17 48490631 48491010 -36947470 - L2 LINE L2 -1349 1965 1554 721 171 101 0 chr17 48491145 48491274 -36947206 + FLAM_C SINE Alu 2 143 0 914 199 0 0 chr17 48491342 48491508 -36946972 + FRAM SINE Alu 5 170 -6 2414 88 0 0 chr17 48491695 48491991 -36946489 - AluSg SINE Alu -14 296 1 558 91 0 0 chr17 48492034 48492100 -36946380 + FRAM SINE Alu 67 132 -44 323 282 91 8 chr17 48492149 48492298 -36946182 + MER20B DNA MER1_type 54 217 -2 23 33 0 0 chr17 48493598 48493628 -36944852 + AT_rich Low_complexity Low_complexity 1 30 0 573 86 0 49 chr17 48494878 48494959 -36943521 + AluS SINE Alu 2 78 -235 734 167 6 0 chr17 48495789 48495945 -36942535 + CT-rich Low_complexity Low_complexity 1 157 0 2342 114 0 6 chr17 48495945 48496260 -36942220 - AluSq SINE Alu 0 313 1 261 293 40 10 chr17 48496260 48496359 -36942121 + MIR3 SINE MIR 103 204 -4 2182 97 4 0 chr17 48497709 48498011 -36940469 + AluSg SINE Alu 1 303 0 247 286 41 20 chr17 48498030 48498128 -36940352 + L3 LINE CR1 1298 1397 -180 250 228 119 30 chr17 48498131 48498232 -36940248 + L1M4 LINE L1 2450 2559 -3587 21 0 0 0 chr17 48498274 48498295 -36940185 + AT_rich Low_complexity Low_complexity 1 21 0 328 266 68 96 chr17 48498320 48498674 -36939806 + L1M4 LINE L1 2689 3032 -3114 562 254 87 6 chr17 48498826 48498999 -36939481 + MIR SINE MIR 76 262 0 214 188 21 0 chr17 48498996 48499044 -36939436 + L3 LINE CR1 1527 1575 -2 * 2151 79 0 0 chr17 48500551 48500818 -36937662 + AluY SINE Alu 40 306 -5 475 198 23 115 chr17 48500827 48501044 -36937436 + L2 LINE L2 3117 3313 0 215 217 100 50 chr17 48501189 48501249 -36937231 - L2 LINE L2 -12 3260 3198 22 70 0 0 chr17 48501387 48501430 -36937050 + AT_rich Low_complexity Low_complexity 1 43 0 917 262 33 25 chr17 48501642 48501886 -36936594 + MIR SINE MIR 3 248 -14 25 51 0 0 chr17 48501986 48502025 -36936455 + AT_rich Low_complexity Low_complexity 1 39 0 2188 118 0 0 chr17 48504150 48504447 -36934033 + AluSq SINE Alu 1 297 -16 1988 154 3 6 chr17 48505867 48506179 -36932301 + AluJo SINE Alu 1 311 -1 1537 164 11 0 chr17 48506249 48506511 -36931969 - L1MD3 LINE L1 0 7995 7731 2336 82 7 7 chr17 48508223 48508550 -36929930 + AluSp SINE Alu 1 327 0 26 50 0 0 chr17 48508600 48508640 -36929840 + AT_rich Low_complexity Low_complexity 1 40 0 273 146 0 0 chr17 48509859 48509907 -36928573 + (A)n Simple_repeat Simple_repeat 1 48 0 679 283 70 16 chr17 48510440 48510684 -36927796 - MIR SINE MIR -1 261 5 2389 99 0 6 chr17 48511423 48511798 -36926682 + AluSx SINE Alu 1 373 0 268 173 19 0 chr17 48512194 48512246 -36926234 - L1ME3 LINE L1 -1 6161 6109 22 25 0 25 chr17 48513065 48513084 -36925396 + AT_rich Low_complexity Low_complexity 1 19 -20 1733 198 0 0 chr17 48513084 48513387 -36925093 - AluJo SINE Alu -9 303 1 22 25 0 25 chr17 48513387 48513407 -36925073 + AT_rich Low_complexity Low_complexity 19 39 0 1659 119 13 8 chr17 48513414 48513649 -36924831 + AluSx SINE Alu 61 296 -16 1778 179 3 13 chr17 48513782 48514094 -36924386 + AluJb SINE Alu 1 309 -3 259 294 87 24 chr17 48514217 48514343 -36924137 - HAL1 LINE L1 -13 2494 2361 271 246 115 0 chr17 48514389 48514519 -36923961 - L1MC4a LINE L1 -1852 5956 5812 688 246 40 60 chr17 48514707 48514955 -36923525 - L1MC4a LINE L1 -1884 5924 5682 2532 76 0 0 chr17 48515158 48515461 -36923019 + AluY SINE Alu 1 303 -8 2294 85 3 3 chr17 48516494 48516789 -36921691 + AluY SINE Alu 1 295 -16 2037 141 7 7 chr17 48517810 48518114 -36920366 + AluSx SINE Alu 1 304 -8 2081 118 14 3 chr17 48518114 48518403 -36920077 + AluSg1 SINE Alu 1 292 -17 2190 93 52 0 chr17 48518817 48519106 -36919374 - AluSp SINE Alu -7 306 3 1579 181 4 0 chr17 48519522 48519771 -36918709 - AluJo SINE Alu -62 250 1 210 244 0 0 chr17 48520265 48520306 -36918174 + (TG)n Simple_repeat Simple_repeat 2 42 0 695 0 0 0 chr17 48521989 48522071 -36916409 + L1PA2 LINE L1 6074 6155 0 512 172 0 0 chr17 48522075 48522174 -36916306 + L1MB3 LINE L1 6077 6175 -8 2043 118 3 23 chr17 48522352 48522656 -36915824 - AluSx SINE Alu -14 298 1 3456 124 2 40 chr17 48523187 48523735 -36914745 + MER1A DNA MER1_type 1 527 0 361 45 0 0 chr17 48523826 48523870 -36914610 + AluY SINE Alu 1 44 -257 2226 93 7 10 chr17 48523870 48524180 -36914300 + AluSc SINE Alu 1 309 0 2289 196 8 38 chr17 48524389 48524608 -36913872 + L1M4 LINE L1 3833 4057 -2089 1648 187 16 32 chr17 48524608 48524924 -36913556 + AluJb SINE Alu 1 311 -1 2289 196 8 38 chr17 48524924 48525208 -36913272 + L1M4 LINE L1 4057 4321 -1825 2288 186 69 4 chr17 48525582 48525686 -36912794 - MER41B LTR ERV1 -23 597 501 2284 123 0 0 chr17 48525686 48525994 -36912486 + AluSx SINE Alu 3 310 -2 2288 186 69 4 chr17 48525994 48526343 -36912137 - MER41B LTR ERV1 -119 501 132 216 122 0 0 chr17 48526594 48526635 -36911845 + (CCCCCA)n Simple_repeat Simple_repeat 2 42 0 999 59 0 8 chr17 48528094 48528213 -36910267 - AluSg SINE Alu -189 121 4 1151 94 0 0 chr17 48528213 48528412 -36910068 + AluSg/x SINE Alu 133 331 0 210 37 0 0 chr17 48529224 48529251 -36909229 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 658 212 45 96 chr17 48529254 48529452 -36909028 + MIR SINE MIR 5 192 -70 2169 120 3 0 chr17 48529454 48529746 -36908734 + AluSq SINE Alu 1 293 -20 245 222 0 19 chr17 48529819 48529873 -36908607 + GA-rich Low_complexity Low_complexity 4 56 0 336 316 116 7 chr17 48529978 48530133 -36908347 + MIR3 SINE MIR 32 203 -5 684 153 100 20 chr17 48530135 48530285 -36908195 + L1MA10 LINE L1 6169 6330 -4 228 290 14 14 chr17 48530647 48530716 -36907764 - L2 LINE L2 -1 3271 3203 2205 99 0 20 chr17 48530729 48531032 -36907448 + AluY SINE Alu 1 297 -14 24 32 0 0 chr17 48531442 48531473 -36907007 + AT_rich Low_complexity Low_complexity 1 31 0 811 147 0 0 chr17 48531473 48531589 -36906891 - AluJb SINE Alu -196 116 1 2293 106 0 28 chr17 48532318 48532638 -36905842 - AluSq SINE Alu -2 311 1 532 297 62 5 chr17 48533503 48533695 -36904785 + MIR SINE MIR 2 204 -58 2131 139 3 0 chr17 48533727 48534030 -36904450 + AluSx SINE Alu 1 304 -8 691 247 88 5 chr17 48534355 48534593 -36903887 + MIR SINE MIR 9 262 0 286 262 37 37 chr17 48536739 48536846 -36901634 + MIR3 SINE MIR 6 112 -96 205 83 0 28 chr17 48537373 48537409 -36901071 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 257 223 223 9 chr17 48537511 48537623 -36900857 - MIR3 SINE MIR -8 200 65 198 225 268 0 chr17 48538106 48538177 -36900303 + MIR3 SINE MIR 117 206 -2 419 302 170 39 chr17 48538846 48539469 -36899011 + L2 LINE L2 2378 3082 -190 232 150 17 33 chr17 48539521 48539581 -36898899 + HSMAR1 DNA Mariner 1229 1287 0 277 310 46 0 chr17 48539609 48539696 -36898784 + L2 LINE L2 3203 3293 -20 291 213 0 0 chr17 48539803 48539864 -36898616 - MLT1A1 LTR MaLR -303 62 2 2319 104 3 0 chr17 48539890 48540198 -36898282 + AluSc SINE Alu 1 309 0 2243 115 0 0 chr17 48540215 48540510 -36897970 + AluSg SINE Alu 1 295 -15 295 109 18 0 chr17 48540670 48540725 -36897755 + L1ME4a LINE L1 6062 6117 -4 21 36 0 0 chr17 48541036 48541064 -36897416 + AT_rich Low_complexity Low_complexity 1 28 0 392 286 31 93 chr17 48542242 48542630 -36895850 - L1ME4a LINE L1 -1 6120 5757 23 33 0 0 chr17 48542756 48542786 -36895694 + AT_rich Low_complexity Low_complexity 1 30 0 31 68 0 0 chr17 48545458 48545517 -36892963 + GC_rich Low_complexity Low_complexity 1 59 0 690 153 56 7 chr17 48546170 48546314 -36892166 + L1MD1 LINE L1 6089 6239 -3 929 192 0 12 chr17 48546401 48546573 -36891907 + FRAM SINE Alu 1 170 -6 189 324 151 7 chr17 48546607 48546746 -36891734 - L2 LINE L2 -242 3030 2872 2215 103 0 0 chr17 48547386 48547695 -36890785 + AluSg SINE Alu 1 309 0 280 157 57 43 chr17 48547848 48547918 -36890562 + L1MC3 LINE L1 7702 7772 -13 1486 95 46 102 chr17 48550106 48550391 -36888089 + AluJo SINE Alu 29 297 -15 201 270 10 30 chr17 48550399 48550499 -36887981 + T-rich Low_complexity Low_complexity 2 99 0 681 169 0 48 chr17 48600707 48600831 -36837649 + FLAM_C SINE Alu 4 121 -12 21 0 0 0 chr17 48600949 48600970 -36837510 + AT_rich Low_complexity Low_complexity 1 21 0 1917 119 43 14 chr17 48601099 48601400 -36837080 + AluJb SINE Alu 1 309 0 189 147 0 0 chr17 48602047 48602081 -36836399 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1922 150 6 13 chr17 48603150 48603429 -36835051 + AluJb SINE Alu 1 279 -33 180 0 0 0 chr17 48603429 48603449 -36835031 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1922 150 6 13 chr17 48603449 48603483 -36834997 + AluJb SINE Alu 279 312 0 464 29 0 0 chr17 48603490 48603609 -36834871 + AluY SINE Alu 243 361 0 319 234 78 78 chr17 48607103 48607257 -36831223 - L1MEd LINE L1 -5009 1110 957 1976 163 3 10 chr17 48608226 48608532 -36829948 - AluSx SINE Alu -8 304 1 1660 124 47 36 chr17 48609223 48609498 -36828982 + AluJo SINE Alu 24 301 -11 2313 71 21 3 chr17 48610147 48610430 -36828050 + AluSx SINE Alu 11 298 -14 1081 167 0 6 chr17 48610462 48610630 -36827850 - AluJb SINE Alu -2 310 144 298 278 43 99 chr17 48610778 48610815 -36827665 + MIR SINE MIR 36 74 -188 1976 153 7 7 chr17 48610815 48611115 -36827365 - AluSx SINE Alu -12 300 1 298 278 43 99 chr17 48611115 48611239 -36827241 + MIR SINE MIR 74 188 -74 2288 131 0 0 chr17 48611371 48611683 -36826797 + AluSx SINE Alu 1 312 0 441 0 0 0 chr17 48611685 48611734 -36826746 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 212 366 71 9 chr17 48611956 48612068 -36826412 + L3b LINE CR1 1338 1456 -127 2592 50 0 3 chr17 48612384 48612681 -36825799 - AluY SINE Alu -15 296 1 925 179 0 0 chr17 48613408 48613548 -36824932 + AluJ SINE Alu 1 140 -172 29 0 0 0 chr17 48613548 48613577 -36824903 + AT_rich Low_complexity Low_complexity 1 29 0 2164 120 0 0 chr17 48613577 48613886 -36824594 + AluSx SINE Alu 1 309 0 2252 108 10 0 chr17 48613889 48614185 -36824295 + AluSq SINE Alu 1 299 -14 978 212 0 0 chr17 48614185 48614350 -36824130 + AluJ SINE Alu 134 298 -14 288 296 23 0 chr17 48614502 48614590 -36823890 - MIR3 SINE MIR -28 180 91 1318 122 0 0 chr17 48615201 48615373 -36823107 + AluSq SINE Alu 54 225 -88 518 195 174 20 chr17 48615705 48615854 -36822626 - MER5A DNA MER1_type 0 189 18 29 0 0 0 chr17 48617313 48617342 -36821138 + GC_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr17 48618926 48618968 -36819512 + GC_rich Low_complexity Low_complexity 1 42 0 204 200 0 0 chr17 48619818 48619853 -36818627 + polypurine Low_complexity Low_complexity 2 36 0 216 184 0 20 chr17 48620141 48620190 -36818290 + (CGG)n Simple_repeat Simple_repeat 1 48 0 234 91 0 0 chr17 48621688 48621721 -36816759 + (A)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr17 48621812 48621834 -36816646 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 48622114 48622134 -36816346 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr17 48625261 48625292 -36813188 + AT_rich Low_complexity Low_complexity 1 31 0 399 132 0 0 chr17 48626726 48626794 -36811686 + (CCG)n Simple_repeat Simple_repeat 2 69 0 217 205 0 0 chr17 48628195 48628234 -36810246 + C-rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr17 48628422 48628445 -36810035 + AT_rich Low_complexity Low_complexity 1 23 0 221 180 20 0 chr17 48629954 48630004 -36808476 + (TAA)n Simple_repeat Simple_repeat 2 52 0 545 129 35 0 chr17 48630906 48631022 -36807458 + GA-rich Low_complexity Low_complexity 2 121 0 29 0 0 0 chr17 48631282 48631311 -36807169 + GC_rich Low_complexity Low_complexity 1 29 0 207 88 0 0 chr17 48631591 48631625 -36806855 + (CA)n Simple_repeat Simple_repeat 1 34 0 191 122 0 24 chr17 48634522 48634563 -36803917 + (TG)n Simple_repeat Simple_repeat 1 40 0 * 201 147 0 0 chr17 48634562 48634596 -36803884 + (GA)n Simple_repeat Simple_repeat 1 34 0 1898 73 8 0 chr17 48636558 48636804 -36801676 + AluSp SINE Alu 39 286 -27 522 0 0 0 chr17 48636804 48636862 -36801618 + (CA)n Simple_repeat Simple_repeat 2 59 0 420 257 9 18 chr17 48637257 48637366 -36801114 - MIR3 SINE MIR -17 191 84 369 198 102 130 chr17 48637374 48637551 -36800929 + MIR3 SINE MIR 30 201 -7 23 54 0 0 chr17 48639878 48639915 -36798565 + GC_rich Low_complexity Low_complexity 1 37 0 218 32 32 0 chr17 48640051 48640082 -36798398 + (CCCCCG)n Simple_repeat Simple_repeat 1 32 0 273 167 0 0 chr17 48644245 48644299 -36794181 + (CA)n Simple_repeat Simple_repeat 1 54 0 279 133 0 0 chr17 48644366 48644411 -36794069 + (GA)n Simple_repeat Simple_repeat 2 46 0 348 161 0 0 chr17 48644653 48644715 -36793765 + CT-rich Low_complexity Low_complexity 1 62 0 186 171 0 0 chr17 48647627 48647668 -36790812 + CT-rich Low_complexity Low_complexity 2 42 0 198 0 0 0 chr17 48648757 48648779 -36789701 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 207 114 0 0 chr17 48651306 48651341 -36787139 + (TAA)n Simple_repeat Simple_repeat 2 36 0 183 259 0 0 chr17 48652050 48652108 -36786372 + T-rich Low_complexity Low_complexity 1 58 0 234 62 0 0 chr17 48653161 48653193 -36785287 + (TCC)n Simple_repeat Simple_repeat 1 32 0 210 156 0 0 chr17 48653692 48653737 -36784743 + (CGG)n Simple_repeat Simple_repeat 2 46 0 198 0 0 0 chr17 48655949 48655971 -36782509 + (T)n Simple_repeat Simple_repeat 1 22 0 25 51 0 0 chr17 48657940 48657979 -36780501 + GC_rich Low_complexity Low_complexity 1 39 0 204 219 0 31 chr17 48660540 48660604 -36777876 + C-rich Low_complexity Low_complexity 6 67 0 257 80 0 40 chr17 48663417 48663467 -36775013 + (CAAAA)n Simple_repeat Simple_repeat 3 50 0 180 0 0 0 chr17 48666448 48666468 -36772012 + (T)n Simple_repeat Simple_repeat 1 20 0 28 29 0 0 chr17 48667621 48667656 -36770824 + AT_rich Low_complexity Low_complexity 1 35 0 303 203 0 0 chr17 48671403 48671467 -36767013 + (TTA)n Simple_repeat Simple_repeat 3 66 0 216 215 15 31 chr17 48672792 48672857 -36765623 + CT-rich Low_complexity Low_complexity 5 68 0 336 19 57 0 chr17 48676624 48676677 -36761803 + (TG)n Simple_repeat Simple_repeat 1 56 0 216 67 0 0 chr17 48678017 48678047 -36760433 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 220 229 0 0 chr17 48679112 48679160 -36759320 + T-rich Low_complexity Low_complexity 104 151 0 215 233 0 14 chr17 48680451 48680524 -36757956 + CT-rich Low_complexity Low_complexity 4 75 0 214 235 20 0 chr17 48681980 48682031 -36756449 + A-rich Low_complexity Low_complexity 1 52 0 205 294 0 0 chr17 48682430 48682498 -36755982 + (TG)n Simple_repeat Simple_repeat 1 68 0 219 103 0 0 chr17 48683342 48683381 -36755099 + (T)n Simple_repeat Simple_repeat 1 39 0 237 209 45 15 chr17 48683431 48683498 -36754982 + CT-rich Low_complexity Low_complexity 5 73 0 2516 51 0 6 chr17 48683779 48684092 -36754388 + AluY SINE Alu 1 311 0 246 128 0 0 chr17 48687253 48687292 -36751188 + (A)n Simple_repeat Simple_repeat 1 39 0 269 131 16 0 chr17 48688336 48688397 -36750083 + GA-rich Low_complexity Low_complexity 1 62 0 35 54 0 0 chr17 48688767 48688823 -36749657 + GC_rich Low_complexity Low_complexity 1 56 0 180 77 0 0 chr17 48689176 48689202 -36749278 + (GGGGA)n Simple_repeat Simple_repeat 4 29 0 231 0 50 25 chr17 48689751 48689791 -36748689 + (GAAA)n Simple_repeat Simple_repeat 1 41 0 182 150 25 0 chr17 48690410 48690450 -36748030 + G-rich Low_complexity Low_complexity 3 43 0 187 160 60 0 chr17 48690488 48690538 -36747942 + GA-rich Low_complexity Low_complexity 5 57 0 368 256 6 0 chr17 48690866 48691038 -36747442 + GA-rich Low_complexity Low_complexity 2 174 0 191 88 29 0 chr17 48691782 48691816 -36746664 + (CCCTG)n Simple_repeat Simple_repeat 1 35 0 351 0 0 0 chr17 48694873 48694912 -36743568 + (TG)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 48699862 48699883 -36738597 + AT_rich Low_complexity Low_complexity 1 21 0 201 191 0 48 chr17 48701232 48701274 -36737206 + C-rich Low_complexity Low_complexity 1 40 0 215 132 0 26 chr17 48702446 48702484 -36735996 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 198 263 92 26 chr17 48706510 48706586 -36731894 - L3 LINE CR1 -7 1570 1490 2372 63 10 0 chr17 48709829 48710129 -36728351 - AluSg SINE Alu -7 303 1 243 0 0 0 chr17 48712169 48712196 -36726284 + (T)n Simple_repeat Simple_repeat 1 27 0 295 300 7 31 chr17 48712580 48712708 -36725772 - MIR SINE MIR -26 182 55 219 69 0 0 chr17 48714060 48714089 -36724391 + (CA)n Simple_repeat Simple_repeat 1 29 0 296 287 70 77 chr17 48714113 48714256 -36724224 + MIR SINE MIR 119 260 -2 377 179 0 39 chr17 48714834 48714912 -36723568 - L2 LINE L2 -1 3312 3238 222 191 0 0 chr17 48717364 48717406 -36721074 + (CGG)n Simple_repeat Simple_repeat 2 43 0 766 91 16 0 chr17 48722783 48722904 -36715576 + (GA)n Simple_repeat Simple_repeat 2 124 0 221 236 146 0 chr17 48723733 48723822 -36714658 + MIR SINE MIR 44 145 -63 598 204 14 21 chr17 48723844 48723986 -36714494 - L1M4 LINE L1 -3580 2566 2426 2019 117 3 0 chr17 48724023 48724313 -36714167 - AluSx SINE Alu -21 291 1 2251 79 30 3 chr17 48724493 48724798 -36713682 - AluSp SINE Alu 0 313 1 1094 56 14 0 chr17 48724799 48724942 -36713538 - AluSp SINE Alu -168 145 1 1797 227 84 36 chr17 48725032 48725592 -36712888 - L1ME3 LINE L1 -56 6106 5520 236 291 139 0 chr17 48725639 48725725 -36712755 - L1ME3 LINE L1 -834 5525 5428 180 0 0 0 chr17 48725749 48725769 -36712711 + (T)n Simple_repeat Simple_repeat 1 20 0 3826 160 27 26 chr17 48725781 48726316 -36712164 - L1MB2 LINE L1 -7 6164 5631 2141 95 3 0 chr17 48726316 48726642 -36711838 + AluSq SINE Alu 1 327 0 3826 160 27 26 chr17 48726642 48726790 -36711690 - L1MB2 LINE L1 -540 5631 5476 216 0 0 0 chr17 48726790 48726814 -36711666 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3826 160 27 26 chr17 48726814 48726864 -36711616 - L1MB2 LINE L1 -695 5476 5428 2408 63 0 0 chr17 48726876 48727178 -36711302 - AluY SINE Alu -9 302 1 1208 121 0 0 chr17 48727178 48727351 -36711129 - AluJo/FRAM SINE Alu -9 303 131 226 205 0 0 chr17 48727354 48727393 -36711087 - AluJ/monomer SINE Alu -261 40 2 3484 227 55 30 chr17 48727393 48727427 -36711053 - L1MEc LINE L1 -2636 3579 3547 2251 84 3 0 chr17 48727427 48727724 -36710756 + AluSp SINE Alu 2 299 -14 3484 227 55 30 chr17 48727724 48728837 -36709643 - L1MEc LINE L1 -2668 3547 2403 321 287 35 11 chr17 48728888 48728975 -36709505 + L1MC4 LINE L1 6615 6703 -1339 194 103 0 26 chr17 48728975 48729000 -36709480 + (TA)n Simple_repeat Simple_repeat 2 27 -12 1632 138 18 14 chr17 48729000 48729129 -36709351 + AluSx SINE Alu 7 134 -178 2116 106 20 0 chr17 48729129 48729430 -36709050 + AluSx SINE Alu 2 308 -4 1632 138 18 14 chr17 48729430 48729582 -36708898 + AluSx SINE Alu 134 289 -23 194 103 0 26 chr17 48729582 48729595 -36708885 + (TA)n Simple_repeat Simple_repeat 27 39 0 431 208 88 0 chr17 48729596 48729721 -36708759 - L1MEc LINE L1 -3943 2453 2318 897 99 0 0 chr17 48729721 48729867 -36708613 - AluY SINE Alu 0 308 163 878 184 81 75 chr17 48729867 48730041 -36708439 - L1MEc LINE L1 -4073 2323 2152 2224 106 0 0 chr17 48730041 48730353 -36708127 - AluSq SINE Alu -1 312 1 878 184 81 75 chr17 48730353 48730435 -36708045 - L1MEc LINE L1 -4244 2152 2062 1241 193 58 106 chr17 48730435 48730475 -36708005 - MLT2D LTR ERVL 0 414 374 324 70 0 0 chr17 48730475 48730518 -36707962 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 1241 193 58 106 chr17 48730518 48730912 -36707568 - MLT2D LTR ERVL -40 374 1 878 184 81 75 chr17 48730912 48730975 -36707505 - L1MEc LINE L1 -4334 2062 2001 985 180 0 0 chr17 48730975 48731153 -36707327 + FRAM SINE Alu 1 175 -1 484 231 123 10 chr17 48731153 48731348 -36707132 - L1MEc LINE L1 -4390 2006 1790 932 262 78 7 chr17 48731427 48731736 -36706744 - L1MC4a LINE L1 0 7808 7478 1229 228 115 16 chr17 48731739 48732121 -36706359 - LTR52 LTR ERVL -1 420 1 7005 164 25 5 chr17 48732121 48733235 -36705245 - LTR52-int LTR ERVL 0 3556 2421 1498 132 14 69 chr17 48733241 48733410 -36705070 - LTR52-int LTR ERVL -1074 2482 2334 1949 128 0 13 chr17 48733410 48733714 -36704766 + AluSx SINE Alu 1 300 -12 1498 132 14 69 chr17 48733714 48733833 -36704647 - LTR52-int LTR ERVL -1222 2334 2210 294 261 33 11 chr17 48733916 48734008 -36704472 - LTR52-int LTR ERVL -1480 2076 1983 813 167 0 8 chr17 48734014 48734146 -36704334 + FAM SINE Alu 29 159 -26 2335 81 0 3 chr17 48734157 48734467 -36704013 - AluY SINE Alu -2 309 1 1490 173 73 4 chr17 48734488 48734760 -36703720 - LTR52-int LTR ERVL -1562 1994 1704 2802 208 105 35 chr17 48734778 48734829 -36703651 - MER21B LTR ERV1 -51 812 766 2429 107 30 28 chr17 48734829 48735192 -36703288 + THE1B LTR MaLR 1 364 0 2802 208 105 35 chr17 48735192 48735862 -36702618 - MER21B LTR ERV1 -97 766 40 1573 163 39 103 chr17 48735864 48736018 -36702462 - LTR52-int LTR ERVL -1867 1689 1527 1623 168 0 14 chr17 48736018 48736309 -36702171 + AluJb SINE Alu 1 287 -25 1573 163 39 103 chr17 48736309 48736560 -36701920 - LTR52-int LTR ERVL -2029 1527 1310 1853 102 84 0 chr17 48736574 48736858 -36701622 - AluSg SINE Alu -2 308 1 1014 90 0 8 chr17 48736861 48736994 -36701486 - AluSq/x SINE Alu -180 132 1 1012 139 95 137 chr17 48736994 48737136 -36701344 - LTR52-int LTR ERVL -2425 1131 985 315 0 0 0 chr17 48737136 48737171 -36701309 + (TG)n Simple_repeat Simple_repeat 2 36 0 1012 139 95 137 chr17 48737171 48737298 -36701182 - LTR52-int LTR ERVL -2571 985 876 2289 87 0 3 chr17 48737298 48737610 -36700870 - AluY SINE Alu 0 311 1 1012 139 95 137 chr17 48737610 48737676 -36700804 - LTR52-int LTR ERVL -2680 876 809 1196 173 18 0 chr17 48737676 48737901 -36700579 - AluJo SINE Alu 0 312 84 1680 136 29 0 chr17 48737904 48738176 -36700304 - AluSx SINE Alu -11 301 22 1557 171 27 38 chr17 48738208 48738383 -36700097 - AluJo SINE Alu -23 289 117 2248 93 7 0 chr17 48738383 48738684 -36699796 - AluSc SINE Alu -6 303 1 1557 171 27 38 chr17 48738684 48738800 -36699680 - AluJo SINE Alu -195 117 1 669 149 5 108 chr17 48738800 48738986 -36699494 - LTR52-int LTR ERVL -2735 821 654 2194 221 10 10 chr17 48739010 48739501 -36698979 - LTR52-int LTR ERVL -3030 526 3 1210 193 42 109 chr17 48739501 48739837 -36698643 - LTR52 LTR ERVL -1 420 119 1940 134 3 0 chr17 48739837 48740148 -36698332 - AluSx SINE Alu 0 312 1 1210 193 42 109 chr17 48740148 48740260 -36698220 - LTR52 LTR ERVL -302 119 1 541 245 52 13 chr17 48740260 48740415 -36698065 - L1MC4a LINE L1 -337 7471 7311 377 386 0 183 chr17 48740436 48740592 -36697888 - L1MDa LINE L1 -4652 1563 1368 435 52 0 0 chr17 48740592 48740650 -36697830 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1809 154 0 14 chr17 48740652 48740800 -36697680 - AluSx SINE Alu -31 281 137 2002 115 20 7 chr17 48740800 48741096 -36697384 - AluSq SINE Alu -13 300 1 1809 154 0 14 chr17 48741096 48741232 -36697248 - AluSx SINE Alu -175 137 1 1818 149 3 31 chr17 48741234 48741555 -36696925 - AluSx SINE Alu 0 312 1 377 386 0 183 chr17 48741555 48742089 -36696391 - L1MDa LINE L1 -4849 1366 745 381 118 0 0 chr17 48742100 48742151 -36696329 + AluSp SINE Alu 121 171 -132 618 116 0 53 chr17 48742151 48742273 -36696207 + AluSg/x SINE Alu 202 310 0 1435 285 41 49 chr17 48742281 48742916 -36695564 - L1MDa LINE L1 -5658 738 109 1942 138 0 0 chr17 48743027 48743337 -36695143 + AluSx SINE Alu 1 310 0 2075 115 3 3 chr17 48743451 48743739 -36694741 - AluSx SINE Alu -24 288 1 1010 304 56 3 chr17 48743857 48744212 -36694268 - L2 LINE L2 -385 2929 2556 2264 69 16 7 chr17 48744335 48744639 -36693841 - AluY SINE Alu -4 307 1 1794 191 49 6 chr17 48745046 48745396 -36693084 + MLT1A1 LTR MaLR 1 365 0 1729 160 46 57 chr17 48745588 48745665 -36692815 + MER7A DNA MER2_type 3 79 -2959 2133 108 0 0 chr17 48745665 48745960 -36692520 + AluSp SINE Alu 1 295 -18 1729 160 46 57 chr17 48745960 48746232 -36692248 + MER7A DNA MER2_type 79 346 0 242 54 0 27 chr17 48746240 48746277 -36692203 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 243 278 28 28 chr17 48746277 48746292 -36692188 + MER112 DNA MER1_type 153 167 -93 1619 168 13 32 chr17 48746292 48746608 -36691872 - AluJb SINE Alu -2 310 1 243 278 28 28 chr17 48746608 48746700 -36691780 + MER112 DNA MER1_type 166 260 0 345 226 195 63 chr17 48746909 48747068 -36691412 + MIR SINE MIR 83 262 0 414 39 0 0 chr17 48747068 48747120 -36691360 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 2126 37 41 0 chr17 48747122 48747390 -36691090 - AluY SINE Alu -32 279 1 213 226 75 0 chr17 48747733 48747786 -36690694 - L3 LINE CR1 -207 1370 1314 351 217 12 48 chr17 48747813 48747896 -36690584 + L2 LINE L2 3186 3265 -7 230 202 214 0 chr17 48748052 48748136 -36690344 - L3 LINE CR1 -262 1315 1214 661 235 84 6 chr17 48748271 48748437 -36690043 - MIR SINE MIR -66 196 18 199 167 48 0 chr17 48748488 48748530 -36689950 - MIR SINE MIR -35 227 184 4261 164 59 49 chr17 48748674 48748714 -36689766 + L1MB7 LINE L1 4677 4715 -1469 1808 119 0 80 chr17 48748714 48749041 -36689439 + AluJb SINE Alu 1 301 -11 4261 164 59 49 chr17 48749041 48749580 -36688900 + L1MB7 LINE L1 4715 5247 -937 1456 179 27 24 chr17 48749580 48749877 -36688603 - AluJo SINE Alu -14 298 1 4261 164 59 49 chr17 48749877 48750009 -36688471 + L1MB7 LINE L1 5247 5376 -808 2183 119 0 0 chr17 48750009 48750312 -36688168 + AluSq SINE Alu 1 303 -10 4261 164 59 49 chr17 48750312 48750591 -36687889 + L1MB7 LINE L1 5376 5651 -533 1849 161 3 0 chr17 48750591 48750889 -36687591 + AluJo SINE Alu 1 299 -13 2127 127 0 0 chr17 48750894 48751193 -36687287 + AluSx SINE Alu 1 299 -13 4261 164 59 49 chr17 48751193 48751256 -36687224 + L1MB7 LINE L1 5654 5715 -469 2050 116 46 38 chr17 48751256 48751628 -36686852 - THE1C LTR MaLR 0 375 1 4261 164 59 49 chr17 48751628 48752028 -36686452 + L1MB7 LINE L1 5715 6168 -16 2736 123 38 60 chr17 48752074 48752629 -36685851 - Charlie1 DNA MER1_type -4 2757 2215 1024 164 53 0 chr17 48752652 48752841 -36685639 - AluJb SINE Alu -13 299 101 480 72 0 0 chr17 48752843 48752912 -36685568 + (TTCC)n Simple_repeat Simple_repeat 2 70 0 1686 180 0 0 chr17 48752914 48753192 -36685288 - AluSx SINE Alu -34 278 1 23 33 0 0 chr17 48753559 48753589 -36684891 + AT_rich Low_complexity Low_complexity 1 30 0 342 0 0 0 chr17 48753704 48753742 -36684738 + (TC)n Simple_repeat Simple_repeat 1 38 0 628 192 32 16 chr17 48754605 48754730 -36683750 + MIR SINE MIR 19 145 -63 244 217 209 27 chr17 48754793 48754906 -36683574 - MIR SINE MIR -67 141 25 274 295 171 0 chr17 48755084 48755189 -36683291 + L2 LINE L2 3188 3310 -3 1884 148 10 0 chr17 48756235 48756533 -36681947 + AluJb SINE Alu 1 301 -11 280 210 16 32 chr17 48756533 48756595 -36681885 - MLT1K LTR MaLR -351 237 177 300 331 64 40 chr17 48756710 48756961 -36681519 + L2 LINE L2 2301 2557 -757 299 113 38 0 chr17 48757037 48757090 -36681390 - Alu SINE Alu 0 301 247 1100 91 0 0 chr17 48757090 48757233 -36681247 - AluSq/x SINE Alu -169 143 1 283 213 27 53 chr17 48757233 48757308 -36681172 + L2 LINE L2 2616 2688 -626 425 201 79 85 chr17 48757337 48757369 -36681111 - L1ME4a LINE L1 -1 6120 6089 1365 199 52 3 chr17 48757369 48757656 -36680824 + AluJb SINE Alu 1 301 -11 425 201 79 85 chr17 48757656 48757812 -36680668 - L1ME4a LINE L1 -32 6089 5933 942 175 71 156 chr17 48757951 48758284 -36680196 - MLT1C LTR MaLR 0 467 168 1454 142 120 4 chr17 48758284 48758558 -36679922 + AluJo SINE Alu 1 306 -6 942 175 71 156 chr17 48758558 48758602 -36679878 - MLT1C LTR MaLR -299 168 122 1297 179 0 5 chr17 48758607 48758830 -36679650 - AluJo SINE Alu -82 230 9 627 106 19 48 chr17 48758830 48758934 -36679546 - MLT1C LTR MaLR -366 101 1 262 345 11 0 chr17 48758936 48759023 -36679457 + L2 LINE L2 2966 3053 -219 825 169 0 0 chr17 48759244 48759368 -36679112 + FLAM_C SINE Alu 2 125 -18 627 264 93 77 chr17 48759368 48759721 -36678759 - MLT1J LTR MaLR -46 465 107 1028 201 23 129 chr17 48759763 48759822 -36678658 + MER46C DNA MER2_type 2 66 -272 414 0 0 0 chr17 48759822 48759868 -36678612 + (TG)n Simple_repeat Simple_repeat 2 47 0 1497 202 3 3 chr17 48759870 48760157 -36678323 - AluJb SINE Alu -10 302 16 1028 201 23 129 chr17 48760157 48760443 -36678037 + MER46C DNA MER2_type 67 313 -25 972 327 83 37 chr17 48760425 48760835 -36677645 + MER115 DNA AcHobo 11 439 -254 * 180 111 0 0 chr17 48760902 48760929 -36677551 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 726 152 0 9 chr17 48760936 48761048 -36677432 - FLAM_C SINE Alu -26 117 7 319 186 14 14 chr17 48761065 48761135 -36677345 + MER115 DNA AcHobo 579 648 -45 2202 85 0 0 chr17 48761174 48761488 -36676992 - AluSx SINE Alu 0 314 1 199 217 0 22 chr17 48761561 48761607 -36676873 + L2 LINE L2 3264 3308 -5 758 128 8 0 chr17 48761888 48762013 -36676467 + L1MA4A LINE L1 5998 6123 -180 423 211 0 2 chr17 48762001 48762107 -36676373 + L1MA4A LINE L1 6044 6269 -8 * 1736 134 21 7 chr17 48762119 48762402 -36676078 + AluJo SINE Alu 1 287 -25 306 83 283 0 chr17 48762423 48762483 -36675997 + FRAM SINE Alu 21 97 -69 315 0 0 0 chr17 48762484 48762519 -36675961 + (TG)n Simple_repeat Simple_repeat 2 36 0 317 235 0 82 chr17 48762531 48762629 -36675851 - L1MC4 LINE L1 -1339 6703 6614 304 295 48 19 chr17 48762680 48762785 -36675695 - L1MC4 LINE L1 -1339 6703 6596 355 192 0 91 chr17 48762805 48762904 -36675576 - L1MC4 LINE L1 -1339 6703 6614 297 0 0 0 chr17 48762904 48762937 -36675543 + (CA)n Simple_repeat Simple_repeat 2 34 0 359 122 326 10 chr17 48762937 48763035 -36675445 - AluJo SINE Alu -72 230 102 279 203 0 0 chr17 48763037 48763096 -36675384 + (TA)n Simple_repeat Simple_repeat 2 60 0 180 204 68 0 chr17 48763531 48763575 -36674905 - L3 LINE CR1 -110 1467 1421 1613 161 70 0 chr17 48763697 48763982 -36674498 - AluJo SINE Alu -7 305 1 2066 120 0 0 chr17 48764095 48764416 -36674064 - AluSx SINE Alu 0 321 1 1714 126 76 7 chr17 48764418 48764695 -36673785 - AluSx SINE Alu -16 296 1 224 261 0 0 chr17 48764980 48765026 -36673454 + polypyrimidine Low_complexity Low_complexity 3 48 0 231 217 65 0 chr17 48765115 48765161 -36673319 - MLT1K LTR MaLR -398 190 142 331 325 89 35 chr17 48765272 48765429 -36673051 + L1MC4a LINE L1 5764 5932 -1876 1788 170 3 0 chr17 48765429 48765729 -36672751 - AluJo SINE Alu -11 301 1 331 325 89 35 chr17 48765729 48765740 -36672740 + L1MC4a LINE L1 5932 5941 -1867 314 288 63 0 chr17 48765901 48766012 -36672468 - L1MC4 LINE L1 -1 8041 7924 664 135 16 40 chr17 48766068 48766194 -36672286 - L1MD1 LINE L1 0 6242 6120 691 154 7 77 chr17 48766357 48766500 -36671980 - L1MD1 LINE L1 -123 6119 5987 996 173 0 5 chr17 48766522 48766707 -36671773 - AluJ SINE Alu 0 312 129 21 0 0 0 chr17 48766709 48766730 -36671750 + AT_rich Low_complexity Low_complexity 1 21 0 779 150 8 0 chr17 48767434 48767554 -36670926 - AluJ SINE Alu -190 122 2 4134 143 35 28 chr17 48767554 48767963 -36670517 - L1MD1 LINE L1 -239 6003 5598 1543 159 43 7 chr17 48767963 48768239 -36670241 + AluJb SINE Alu 1 286 -26 4134 143 35 28 chr17 48768239 48768792 -36669688 - L1MD1 LINE L1 -644 5598 5031 1255 189 161 0 chr17 48768796 48769056 -36669424 - AluJb SINE Alu 0 302 1 1658 202 29 69 chr17 48969096 48969587 -36468893 - L1ME2 LINE L1 -213 5951 5481 1020 105 0 0 chr17 48969587 48969720 -36468760 - AluSg/x SINE Alu -4 306 174 315 193 294 0 chr17 48969721 48969840 -36468640 - L1ME2 LINE L1 -679 5483 5330 973 178 0 24 chr17 48969851 48970020 -36468460 - AluJo/FRAM SINE Alu -15 297 133 2322 95 0 0 chr17 48970021 48970304 -36468176 - AluSx SINE Alu -15 297 15 2028 72 0 0 chr17 48970307 48970544 -36467936 - AluSc SINE Alu -72 237 1 2061 116 34 0 chr17 48970578 48970870 -36467610 - AluSx SINE Alu -10 302 1 920 167 7 0 chr17 48971090 48971234 -36467246 + AluSx SINE Alu 15 159 -153 629 133 20 0 chr17 48971394 48971492 -36466988 - AluSq/x SINE Alu -175 137 38 258 182 0 0 chr17 48971507 48971608 -36466872 + Alu SINE Alu 240 340 0 1992 121 54 4 chr17 48971620 48971900 -36466580 + AluSx SINE Alu 1 294 -18 884 261 68 7 chr17 48972385 48972695 -36465785 + LTR47B LTR ERVL 17 345 -98 251 125 0 0 chr17 48972846 48972886 -36465594 - Alu SINE Alu -10 290 251 2564 80 0 0 chr17 48972902 48973214 -36465266 - AluSx SINE Alu 0 312 1 681 177 31 0 chr17 48973235 48973365 -36465115 - L1PA16 LINE L1 -8 6158 6025 571 188 17 17 chr17 48973576 48973693 -36464787 - FRAM SINE Alu -19 157 41 257 184 0 0 chr17 48973936 48973985 -36464495 - MIR3 SINE MIR -5 203 155 1886 175 0 3 chr17 48973986 48974295 -36464185 + AluJo SINE Alu 1 308 -4 2204 86 4 0 chr17 48974306 48974585 -36463895 + AluSp SINE Alu 1 280 -33 795 186 21 0 chr17 48974697 48974842 -36463638 + FAM SINE Alu 3 150 -35 454 229 9 19 chr17 48974842 48974947 -36463533 - MER63 DNA MER1_type -332 730 1 2204 112 7 0 chr17 48975080 48975374 -36463106 + AluSq SINE Alu 1 296 -17 2311 99 0 3 chr17 48975376 48975678 -36462802 + AluSp SINE Alu 3 303 -10 2238 139 0 0 chr17 48975888 48976198 -36462282 + AluSx SINE Alu 1 310 -2 2011 131 17 3 chr17 48976203 48976500 -36461980 + AluSx SINE Alu 1 301 -11 2018 110 59 3 chr17 48976511 48976800 -36461680 + AluSq SINE Alu 1 305 -8 2302 112 3 0 chr17 48976800 48977104 -36461376 + AluSp SINE Alu 1 305 -8 335 222 0 12 chr17 48977108 48977189 -36461291 - MLT1J LTR MaLR -15 496 417 1168 70 13 0 chr17 48977195 48977351 -36461129 + U1 snRNA snRNA 1 158 -7 29 0 0 0 chr17 48977353 48977382 -36461098 + AT_rich Low_complexity Low_complexity 1 29 0 1905 110 17 53 chr17 48977387 48977687 -36460793 + AluSx SINE Alu 14 302 -10 522 176 0 0 chr17 48977923 48978014 -36460466 - FLAM_A SINE Alu -7 135 45 810 154 0 39 chr17 48978026 48978156 -36460324 - FLAM_C SINE Alu -18 125 1 1273 108 0 0 chr17 48978161 48978327 -36460153 - AluSp SINE Alu -10 303 138 1224 121 6 22 chr17 48978347 48978529 -36459951 + AluSp SINE Alu 121 299 -14 607 237 0 8 chr17 48978595 48978713 -36459767 + FLAM_C SINE Alu 1 117 -16 2395 70 7 3 chr17 48978728 48979029 -36459451 - AluY SINE Alu -2 309 8 2083 111 10 7 chr17 48979153 48979450 -36459030 + AluSx SINE Alu 9 306 -6 2164 114 3 32 chr17 48979526 48979841 -36458639 + AluSx SINE Alu 1 306 -6 2076 152 0 3 chr17 48980521 48980830 -36457650 - AluSx SINE Alu -4 308 1 1766 167 10 3 chr17 48981028 48981322 -36457158 + AluJo SINE Alu 1 296 -16 2422 88 0 0 chr17 48981322 48981619 -36456861 + AluSg SINE Alu 1 297 -13 2283 117 0 3 chr17 48981620 48981929 -36456551 + AluSg SINE Alu 1 308 -2 2439 88 16 0 chr17 48982208 48982515 -36455965 + AluSx SINE Alu 1 312 0 181 254 18 36 chr17 48982581 48982636 -36455844 - MIR SINE MIR -189 73 20 2396 85 3 0 chr17 48982689 48982984 -36455496 + AluSp SINE Alu 3 298 -15 568 182 26 168 chr17 48982994 48983166 -36455314 + L1ME1 LINE L1 4835 5030 -1116 2164 80 13 50 chr17 48983166 48983468 -36455012 + AluSp SINE Alu 3 293 -20 568 182 26 168 chr17 48983468 48983566 -36454914 + L1ME1 LINE L1 5030 5050 -1096 2354 121 0 0 chr17 48983566 48983872 -36454608 + AluSx SINE Alu 1 306 -6 568 182 26 168 chr17 48983872 48983940 -36454540 + L1ME1 LINE L1 5050 5126 -1020 755 160 7 35 chr17 48983948 48984092 -36454388 + FLAM_C SINE Alu 1 140 -3 410 172 11 46 chr17 48984150 48984169 -36454311 + L1ME1 LINE L1 5103 5121 -1025 480 35 0 0 chr17 48984169 48984227 -36454253 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 410 172 11 46 chr17 48984227 48984294 -36454186 + L1ME1 LINE L1 5121 5186 -960 1754 154 3 50 chr17 48984295 48984448 -36454032 + AluJb SINE Alu 1 133 -179 2310 59 42 10 chr17 48984448 48984737 -36453743 + AluY SINE Alu 1 298 -13 1754 154 3 50 chr17 48984737 48984901 -36453579 + AluJb SINE Alu 133 303 -9 2379 193 54 39 chr17 48984907 48985261 -36453219 + L1ME1 LINE L1 5290 5637 -529 1937 116 11 8 chr17 48985261 48985528 -36452952 + AluSq SINE Alu 42 309 -4 2379 193 54 39 chr17 48985528 48985571 -36452909 + L1ME1 LINE L1 5637 5678 -488 1535 168 6 75 chr17 48985571 48985926 -36452554 - AluJb SINE Alu 0 312 3 2379 193 54 39 chr17 48985926 48986171 -36452309 + L1ME1 LINE L1 5678 5943 -223 1039 132 0 0 chr17 48986185 48986329 -36452151 + AluSq/x SINE Alu 2 145 -168 2027 92 62 0 chr17 48986329 48986628 -36451852 + AluSp SINE Alu 1 313 0 4015 84 7 43 chr17 48986628 48986660 -36451820 - MER41B-int LTR ERV1 -720 5226 5194 266 0 29 0 chr17 48986660 48986694 -36451786 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 1834 158 29 0 chr17 48986694 48986966 -36451514 - AluSx SINE Alu -32 280 1 4015 84 7 43 chr17 48986966 48987253 -36451227 - MER41B-int LTR ERV1 -751 5195 4936 2220 121 0 0 chr17 48987253 48987573 -36450907 - AluSx SINE Alu 0 312 1 4015 84 7 43 chr17 48987573 48987861 -36450619 - MER41B-int LTR ERV1 -1010 4936 4639 538 118 35 0 chr17 48987856 48987941 -36450539 - MER41B-int LTR ERV1 -5858 88 1 * 943 116 7 7 chr17 48987941 48988096 -36450384 - MER41B LTR ERV1 0 635 481 1000 177 16 16 chr17 48988106 48988292 -36450188 - AluJo SINE Alu -126 186 1 2496 85 0 0 chr17 48988296 48988602 -36449878 - AluY SINE Alu -5 306 1 819 186 62 0 chr17 48988604 48988749 -36449731 - AluJb SINE Alu -8 304 151 348 24 0 0 chr17 48988749 48988790 -36449690 + (CA)n Simple_repeat Simple_repeat 2 42 0 855 196 76 0 chr17 48988798 48988956 -36449524 + FRAM SINE Alu 1 165 -11 2215 119 3 0 chr17 48989036 48989338 -36449142 + AluSp SINE Alu 1 303 -10 252 323 94 31 chr17 48989344 48989371 -36449109 - MIR SINE MIR -8 254 230 1971 194 115 43 chr17 48989371 48989537 -36448943 + MLT1F LTR MaLR 1 154 -388 1903 147 0 7 chr17 48989537 48989853 -36448627 + AluJb SINE Alu 1 314 0 1971 194 115 43 chr17 48989853 48990191 -36448289 + MLT1F LTR MaLR 154 542 0 252 323 94 31 chr17 48990191 48990386 -36448094 - MIR SINE MIR -32 230 18 1767 94 147 4 chr17 48990440 48990736 -36447744 - AluSq SINE Alu 0 313 1 2229 126 3 0 chr17 48990746 48991055 -36447425 - AluSx SINE Alu -2 310 1 352 140 0 0 chr17 48991055 48991105 -36447375 + AluJ/FRAM SINE Alu 224 273 -29 248 325 12 0 chr17 48991333 48991416 -36447064 + (CA)n Simple_repeat Simple_repeat 2 85 0 1644 170 0 4 chr17 48991469 48991734 -36446746 + AluJb SINE Alu 5 268 -44 2135 133 10 7 chr17 48992255 48992564 -36445916 + AluSx SINE Alu 1 310 -2 2558 84 0 0 chr17 48992806 48993116 -36445364 + AluSg SINE Alu 1 310 0 2272 78 47 0 chr17 48995019 48995315 -36443165 - AluSp SINE Alu -3 310 1 226 211 39 0 chr17 48995320 48995372 -36443108 - MER112 DNA MER1_type -6 254 201 183 114 0 0 chr17 48995497 48995532 -36442948 + (T)n Simple_repeat Simple_repeat 1 35 0 752 61 31 0 chr17 48995533 48995631 -36442849 - U6 snRNA snRNA -6 101 1 281 307 46 37 chr17 48996517 48996654 -36441826 + MIR SINE MIR 36 140 -68 1164 231 65 47 chr17 48996658 48997044 -36441436 - L1M4 LINE L1 -1130 5016 4624 1532 179 52 46 chr17 48997218 48997525 -36440955 - AluJb SINE Alu -2 310 2 2081 110 3 45 chr17 48997564 48997874 -36440606 + AluSx SINE Alu 1 297 -15 197 280 127 34 chr17 48998067 48998185 -36440295 + MIR3 SINE MIR 8 136 -72 226 228 0 101 chr17 48999541 48999620 -36438860 - L2 LINE L2 -2 3270 3200 199 278 21 52 chr17 49000052 49000149 -36438331 - MIR3 SINE MIR -21 187 94 1629 145 16 58 chr17 49000635 49000945 -36437535 - AluJb SINE Alu -13 299 3 296 130 0 0 chr17 49000945 49000991 -36437489 - L1MC5 LINE L1 -301 7660 7615 488 275 79 11 chr17 49001225 49001403 -36437077 + MIR SINE MIR 8 197 -65 1857 127 45 8 chr17 49001453 49001721 -36436759 + AluSg SINE Alu 1 278 -32 315 250 0 0 chr17 49001745 49001805 -36436675 + L1MC4 LINE L1 6644 6703 -1339 243 61 0 0 chr17 49001806 49001839 -36436641 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 372 22 0 0 chr17 49001838 49001883 -36436597 + (TA)n Simple_repeat Simple_repeat 2 46 0 903 199 48 0 chr17 49001883 49002049 -36436431 + AluJb SINE Alu 125 298 -14 352 260 115 30 chr17 49002097 49002332 -36436148 + L1MC5 LINE L1 7681 7935 -26 211 277 15 15 chr17 49002957 49003022 -36435458 + MIR3 SINE MIR 112 176 -32 410 192 19 58 chr17 49003622 49003726 -36434754 + Charlie5 DNA MER1_type 6 105 -2507 1159 82 0 0 chr17 49003732 49003867 -36434613 + AluSq/x SINE Alu 1 135 -178 2000 123 0 60 chr17 49003867 49004185 -36434295 + AluSx SINE Alu 1 299 -13 719 139 168 19 chr17 49004208 49004416 -36434064 + Charlie5 DNA MER1_type 2386 2624 0 234 324 28 0 chr17 49004416 49004487 -36433993 - L2 LINE L2 -57 3215 3143 234 91 0 0 chr17 49004489 49004522 -36433958 + (GTTTG)n Simple_repeat Simple_repeat 5 37 0 261 169 0 0 chr17 49004955 49005014 -36433466 + (CGGG)n Simple_repeat Simple_repeat 3 61 0 248 130 22 0 chr17 49005359 49005405 -36433075 + (CA)n Simple_repeat Simple_repeat 1 47 0 324 170 0 0 chr17 49005511 49005564 -36432916 - MIR SINE MIR -61 147 95 628 181 26 0 chr17 49006628 49006744 -36431736 + AluJb SINE Alu 178 296 -16 2415 87 0 34 chr17 49006926 49007249 -36431231 + AluSx SINE Alu 1 312 0 1117 143 0 23 chr17 49007255 49007430 -36431050 + AluSc SINE Alu 134 304 -5 1897 145 21 3 chr17 49007457 49007747 -36430733 + AluJb SINE Alu 1 295 -17 1843 137 19 38 chr17 49008766 49009079 -36429401 + AluSx SINE Alu 1 307 -5 1625 171 59 3 chr17 49009166 49009452 -36429028 + AluSx SINE Alu 1 302 -10 2292 95 3 16 chr17 49009639 49009945 -36428535 + AluSx SINE Alu 1 302 -10 2162 144 0 0 chr17 49010127 49010426 -36428054 + AluSx SINE Alu 1 299 -13 1309 151 15 85 chr17 49010667 49010939 -36427541 + AluJo SINE Alu 47 299 -13 749 189 0 8 chr17 49011102 49011234 -36427246 - FRAM SINE Alu -45 131 1 471 281 166 21 chr17 49011303 49011463 -36427017 - L2 LINE L2 -40 3273 3067 2275 111 3 0 chr17 49011463 49011761 -36426719 + AluSg SINE Alu 1 299 -11 471 281 166 21 chr17 49011761 49011835 -36426645 - L2 LINE L2 -246 3067 3005 1640 160 48 24 chr17 49012386 49012679 -36425801 - AluJb SINE Alu -12 300 1 2782 35 0 0 chr17 49012686 49012997 -36425483 - AluY SINE Alu 0 311 1 2099 108 4 0 chr17 49013527 49013796 -36424684 + AluSc SINE Alu 1 270 -39 846 118 0 0 chr17 49013801 49013962 -36424518 + (GGAA)n Simple_repeat Simple_repeat 4 164 0 1712 140 8 4 chr17 49014455 49014719 -36423761 + AluSq SINE Alu 43 307 -6 396 0 0 0 chr17 49015210 49015254 -36423226 + (CA)n Simple_repeat Simple_repeat 2 45 0 2313 116 0 7 chr17 49015348 49015658 -36422822 - AluSx SINE Alu -4 308 1 377 271 61 33 chr17 49015670 49015851 -36422629 - L2 LINE L2 0 3313 3128 336 283 155 11 chr17 49015829 49016016 -36422464 + MIR SINE MIR 5 218 -44 * 265 284 34 11 chr17 49017239 49017327 -36421153 - MIR SINE MIR -70 192 103 717 208 38 13 chr17 49017431 49017590 -36420890 + AluJb SINE Alu 136 298 -14 2140 107 23 13 chr17 49018121 49018421 -36420059 + AluSx SINE Alu 1 303 -9 739 202 0 0 chr17 49018624 49018748 -36419732 - FRAM SINE Alu -17 159 36 274 269 258 16 chr17 49018762 49018948 -36419532 + MIR SINE MIR 21 251 -11 1911 57 9 4 chr17 49019158 49019387 -36419093 - AluSg/x SINE Alu 0 312 83 2174 48 11 7 chr17 49019743 49020013 -36418467 + AluY SINE Alu 34 304 -7 562 60 24 12 chr17 49019931 49020015 -36418465 + Alu SINE Alu 223 307 -5 880 163 25 25 chr17 49020100 49020216 -36418264 + L1MB3 LINE L1 5984 6102 -81 2496 80 0 6 chr17 49020216 49020527 -36417953 - AluSx SINE Alu -1 311 3 880 163 25 25 chr17 49020527 49020606 -36417874 + L1MB3 LINE L1 6101 6179 -4 2291 99 3 0 chr17 49020606 49020899 -36417581 - AluSq SINE Alu -19 294 1 26 0 0 0 chr17 49020899 49020925 -36417555 + AT_rich Low_complexity Low_complexity 1 26 0 2123 113 0 13 chr17 49020995 49021305 -36417175 + AluSx SINE Alu 1 306 -6 234 333 35 53 chr17 49021323 49021437 -36417043 + L2 LINE L2 3161 3272 0 2436 107 0 0 chr17 49022128 49022436 -36416044 - AluSq SINE Alu -5 308 1 2025 149 7 0 chr17 49024253 49024548 -36413932 - AluSx SINE Alu -15 297 1 209 33 33 0 chr17 49026518 49026548 -36411932 + (TCCC)n Simple_repeat Simple_repeat 1 31 0 25 0 0 0 chr17 49027986 49028011 -36410469 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr17 49030352 49030402 -36408078 + (CA)n Simple_repeat Simple_repeat 2 51 0 189 0 0 0 chr17 49032901 49032922 -36405558 + (A)n Simple_repeat Simple_repeat 1 21 0 245 125 21 21 chr17 49035046 49035094 -36403386 + L2 LINE L2 3261 3308 -5 24 0 0 0 chr17 49035744 49035768 -36402712 + AT_rich Low_complexity Low_complexity 1 24 0 229 231 19 0 chr17 49036377 49036429 -36402051 + CT-rich Low_complexity Low_complexity 3 55 0 354 265 73 40 chr17 49036534 49036745 -36401735 + HAL1 LINE L1 924 3222 -1402 302 216 52 52 chr17 49037287 49037384 -36401096 - L1 LINE L1 -2962 3184 3088 23 0 0 0 chr17 49038160 49038183 -36400297 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr17 49038422 49038454 -36400026 + AT_rich Low_complexity Low_complexity 1 32 0 223 136 0 61 chr17 49038897 49038963 -36399517 + (CCCCCT)n Simple_repeat Simple_repeat 3 64 0 203 301 11 32 chr17 49039004 49039097 -36399383 + CT-rich Low_complexity Low_complexity 6 96 0 21 0 0 0 chr17 49040233 49040254 -36398226 + AT_rich Low_complexity Low_complexity 1 21 0 547 173 65 0 chr17 49040388 49040527 -36397953 + L1MB3 LINE L1 5769 5916 -264 645 144 50 0 chr17 49040528 49040667 -36397813 + L1MB3 LINE L1 6018 6163 -20 1523 182 44 4 chr17 49040667 49040837 -36397643 - AluJo SINE Alu -10 302 115 387 0 0 0 chr17 49040837 49040880 -36397600 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1523 182 44 4 chr17 49040880 49040984 -36397496 - AluJo SINE Alu -197 115 17 2484 96 0 0 chr17 49041048 49041361 -36397119 + AluSp SINE Alu 1 313 0 1788 160 0 57 chr17 49041395 49041544 -36396936 + AluJb SINE Alu 1 122 -190 2576 51 0 16 chr17 49041544 49041860 -36396620 + AluY SINE Alu 1 311 0 1788 160 0 57 chr17 49041860 49042041 -36396439 + AluJb SINE Alu 122 312 0 1243 163 5 9 chr17 49042396 49042611 -36395869 - AluSc SINE Alu -90 219 6 1250 164 82 46 chr17 49042659 49042786 -36395694 + AluJo SINE Alu 3 124 -188 2259 108 7 0 chr17 49042786 49043093 -36395387 + AluSc SINE Alu 1 309 0 1250 164 82 46 chr17 49043093 49043172 -36395308 + AluJo SINE Alu 124 199 -113 2268 124 0 0 chr17 49043172 49043479 -36395001 - AluSq SINE Alu -6 307 1 1250 164 82 46 chr17 49043479 49043552 -36394928 + AluJo SINE Alu 199 293 -19 283 200 90 107 chr17 49043671 49043833 -36394647 - MIR3 SINE MIR -65 143 4 2237 113 7 3 chr17 49044120 49044429 -36394051 - AluSg SINE Alu 0 310 1 2214 124 3 10 chr17 49044709 49045023 -36393457 - AluSx SINE Alu 0 312 1 205 152 0 0 chr17 49045410 49045443 -36393037 + G-rich Low_complexity Low_complexity 2 34 0 918 137 0 34 chr17 49045663 49045809 -36392671 - AluSg SINE Alu -18 292 152 757 83 0 0 chr17 49045810 49045906 -36392574 - AluSg SINE Alu -213 97 2 2241 111 7 0 chr17 49046546 49046843 -36391637 + AluSx SINE Alu 1 299 -13 1317 105 0 28 chr17 49048193 49048374 -36390106 - AluSg/x SINE Alu -5 307 132 236 53 26 0 chr17 49048374 49048412 -36390068 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2299 67 0 0 chr17 49048412 49048694 -36389786 - AluY SINE Alu -29 282 1 2180 116 10 3 chr17 49048697 49049007 -36389473 - AluSx SINE Alu 0 312 1 1774 193 3 3 chr17 49049537 49049838 -36388642 + AluJb SINE Alu 1 301 -11 1525 113 0 0 chr17 49049956 49050159 -36388321 + AluSg/x SINE Alu 110 312 0 1557 142 4 0 chr17 49050671 49050896 -36387584 - AluJb SINE Alu 0 312 87 2124 126 0 40 chr17 49050909 49051234 -36387246 - AluSx SINE Alu 0 312 1 2287 102 0 0 chr17 49051235 49051529 -36386951 - AluSg1 SINE Alu -15 294 1 647 256 41 32 chr17 49051530 49051749 -36386731 + MIR SINE MIR 4 224 -38 2447 80 0 3 chr17 49051883 49052184 -36386296 - AluY SINE Alu -11 300 1 2372 76 6 44 chr17 49052184 49052355 -36386125 - AluSp SINE Alu -9 304 149 2547 54 0 0 chr17 49052355 49052649 -36385831 - AluY SINE Alu -17 294 1 2372 76 6 44 chr17 49052649 49052793 -36385687 - AluSp SINE Alu -164 149 1 1069 365 30 40 chr17 49053325 49053629 -36384851 - AluY SINE Alu 0 301 1 2369 77 10 32 chr17 49053639 49053818 -36384662 - AluSp SINE Alu -8 305 134 2262 107 0 16 chr17 49053818 49054128 -36384352 - AluSg SINE Alu -5 305 1 2369 77 10 32 chr17 49054128 49054260 -36384220 - AluSp SINE Alu -179 134 1 2205 91 0 20 chr17 49054376 49054673 -36383807 - AluY SINE Alu -13 298 8 2251 117 0 0 chr17 49054834 49055132 -36383348 + AluSc SINE Alu 1 298 -11 1557 159 45 15 chr17 49055149 49055413 -36383067 + AluJb SINE Alu 11 282 -30 343 328 155 6 chr17 49056628 49056802 -36381678 + MIR SINE MIR 4 203 -59 203 179 0 0 chr17 49056804 49056843 -36381637 + A-rich Low_complexity Low_complexity 1 39 0 728 199 15 0 chr17 49058213 49058344 -36380136 + FAM SINE Alu 42 174 -11 2586 60 0 0 chr17 49058347 49058649 -36379831 + AluY SINE Alu 1 302 -9 23 0 0 0 chr17 49058652 49058675 -36379805 + AT_rich Low_complexity Low_complexity 1 23 0 700 177 0 9 chr17 49059011 49059124 -36379356 + AluJo/FLAM SINE Alu 3 114 -198 2249 90 3 20 chr17 49059124 49059289 -36379191 - AluSx SINE Alu -15 297 138 2272 103 3 13 chr17 49059289 49059591 -36378889 - AluSp SINE Alu -14 299 1 2249 90 3 20 chr17 49059591 49059724 -36378756 - AluSx SINE Alu -174 138 4 1977 148 0 0 chr17 49059761 49060044 -36378436 + AluSx SINE Alu 1 283 -29 186 43 0 0 chr17 49060047 49060070 -36378410 + (GAAAA)n Simple_repeat Simple_repeat 4 26 0 1640 127 0 80 chr17 49060070 49060346 -36378134 + AluSx SINE Alu 59 312 0 498 313 15 0 chr17 49060379 49060510 -36377970 - L2 LINE L2 0 3272 3140 349 235 25 0 chr17 49060527 49060608 -36377872 - AluJ/FRAM SINE Alu -4 298 216 2370 92 0 13 chr17 49060748 49061063 -36377417 - AluY SINE Alu 0 311 1 2028 89 96 0 chr17 49061064 49061335 -36377145 - AluSg SINE Alu -13 297 1 269 346 0 0 chr17 49061338 49061439 -36377041 + L2 LINE L2 2520 2620 -694 1859 103 126 43 chr17 49061467 49061693 -36376787 + MER51B LTR ERV1 1 207 -170 2491 75 3 0 chr17 49061693 49061998 -36376482 - AluSp SINE Alu -7 306 1 2137 126 3 10 chr17 49062006 49062316 -36376164 - AluSx SINE Alu -1 311 4 1859 103 126 43 chr17 49062316 49062428 -36376052 + MER51B LTR ERV1 213 377 0 1716 93 0 43 chr17 49062428 49062686 -36375794 + MER51B-int LTR ERV1 1 247 -7569 2264 107 7 3 chr17 49062686 49062994 -36375486 - AluSg1 SINE Alu 0 309 1 2315 88 7 7 chr17 49063083 49063390 -36375090 - AluSq SINE Alu -6 307 1 333 329 86 7 chr17 49063390 49063530 -36374950 - MIR SINE MIR -95 167 17 201 359 48 19 chr17 49063576 49063679 -36374801 + L2 LINE L2 3198 3303 -10 21 57 0 0 chr17 49064009 49064044 -36374436 + GC_rich Low_complexity Low_complexity 1 35 0 2510 59 3 0 chr17 49064462 49064766 -36373714 - AluY SINE Alu -6 305 1 323 250 8 81 chr17 49065024 49065148 -36373332 - MIR SINE MIR 0 262 148 2052 125 11 0 chr17 49065154 49065459 -36373021 - AluSg SINE Alu 0 308 1 992 86 7 29 chr17 49065459 49065599 -36372881 - AluSq/x SINE Alu -175 137 1 2255 112 0 6 chr17 49065621 49065935 -36372545 + AluSx SINE Alu 1 312 0 474 100 29 0 chr17 49065940 49066010 -36372470 + AluS SINE Alu 2 73 -239 240 294 29 0 chr17 49066017 49066085 -36372395 - MIR SINE MIR -154 108 39 735 54 0 0 chr17 49066429 49066522 -36371958 - AluSp/q SINE Alu -10 303 211 185 62 0 31 chr17 49066777 49066796 -36371684 + (ATTG)n Simple_repeat Simple_repeat 2 21 -11 2088 148 3 3 chr17 49066796 49067099 -36371381 + AluSx SINE Alu 1 303 -9 185 62 0 31 chr17 49067099 49067111 -36371369 + (ATTG)n Simple_repeat Simple_repeat 21 32 0 460 170 234 0 chr17 49067111 49067205 -36371275 - FLAM_C SINE Alu -17 116 1 2371 77 0 0 chr17 49067992 49068278 -36370202 - AluY SINE Alu -25 286 1 23 0 0 0 chr17 49068423 49068446 -36370034 + AT_rich Low_complexity Low_complexity 1 23 0 1497 175 4 0 chr17 49068446 49068674 -36369806 + AluJb SINE Alu 1 229 -83 1730 155 7 0 chr17 49068693 49068964 -36369516 - AluSx SINE Alu -9 303 31 1624 85 0 24 chr17 49069064 49069276 -36369204 - AluSg SINE Alu -103 207 1 2063 104 3 24 chr17 49069365 49069663 -36368817 - AluSc SINE Alu -16 293 2 2407 93 3 0 chr17 49069727 49070037 -36368443 - AluSp SINE Alu -2 311 1 22 0 0 0 chr17 49070077 49070099 -36368381 + AT_rich Low_complexity Low_complexity 1 22 0 2265 106 0 10 chr17 49070272 49070606 -36367874 - AluSc SINE Alu 0 309 1 2044 138 0 7 chr17 49070609 49070906 -36367574 - AluSq SINE Alu -18 295 1 800 178 12 65 chr17 49072238 49072407 -36366073 - FAM SINE Alu -15 160 1 280 233 52 26 chr17 49072411 49072527 -36365953 - L1ME4a LINE L1 -44 6077 5959 1975 132 7 36 chr17 49072561 49072720 -36365760 - AluSx SINE Alu -18 294 147 2651 43 0 0 chr17 49072720 49073020 -36365460 - AluY SINE Alu -11 300 1 1975 132 7 36 chr17 49073020 49073163 -36365317 - AluSx SINE Alu -165 147 1 965 194 194 48 chr17 49073397 49073630 -36364850 + AluSx SINE Alu 1 279 -33 1954 112 79 4 chr17 49073630 49073907 -36364573 - AluSg SINE Alu -12 298 1 965 194 194 48 chr17 49073907 49073941 -36364539 + AluSx SINE Alu 279 307 -5 412 273 60 60 chr17 49074176 49074359 -36364121 + MER102a DNA MER1_type 127 309 -21 1710 157 28 14 chr17 49074506 49074793 -36363687 - AluJo SINE Alu -20 292 2 509 263 88 7 chr17 49075185 49075322 -36363158 - L2 LINE L2 -6 3266 3119 2195 97 10 23 chr17 49075487 49075787 -36362693 - AluSp SINE Alu -17 296 1 2314 91 0 10 chr17 49076018 49076316 -36362164 - AluSx SINE Alu -17 295 1 192 239 0 0 chr17 49077128 49077174 -36361306 + MIR SINE MIR 129 174 -88 192 294 24 59 chr17 49078002 49078087 -36360393 - MIR SINE MIR -100 108 27 2438 69 3 20 chr17 49081470 49081776 -36356704 + AluSp SINE Alu 1 301 -12 2082 154 10 6 chr17 49082939 49083250 -36355230 - AluSx SINE Alu 0 312 1 2250 139 0 0 chr17 49083377 49083687 -36354793 - AluSx SINE Alu -2 310 1 568 164 67 75 chr17 49083975 49084109 -36354371 + FLAM_C SINE Alu 1 133 0 404 119 41 5 chr17 49084114 49084357 -36354123 + AluSx SINE Alu 21 302 -8 888 188 19 7 chr17 49084363 49084517 -36353963 + FRAM SINE Alu 8 163 -13 2150 92 35 3 chr17 49084618 49084902 -36353578 - AluSq SINE Alu -20 293 1 2394 105 0 0 chr17 49084903 49085209 -36353271 - AluY SINE Alu -3 308 3 2086 130 7 0 chr17 49085472 49085764 -36352716 - AluSx SINE Alu -18 294 1 2188 104 0 0 chr17 49085835 49086122 -36352358 - AluSg SINE Alu -1 309 23 1968 141 3 0 chr17 49086213 49086496 -36351984 - AluJo SINE Alu -20 292 9 518 297 0 0 chr17 49087422 49087533 -36350947 + FLAM_A SINE Alu 1 111 -31 808 137 6 137 chr17 49087533 49087715 -36350765 - FRAM SINE Alu -9 167 10 2186 108 26 7 chr17 49087731 49088038 -36350442 - AluSq SINE Alu 0 313 1 1090 170 5 47 chr17 49088056 49088268 -36350212 - AluJo SINE Alu -25 287 85 1935 162 0 3 chr17 49088473 49088763 -36349717 + AluJo SINE Alu 1 289 -23 1215 114 0 0 chr17 49088967 49089125 -36349355 + AluSg SINE Alu 1 158 -152 239 0 32 0 chr17 49089125 49089156 -36349324 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2104 146 0 9 chr17 49089204 49089519 -36348961 + AluSx SINE Alu 1 312 0 2168 118 3 0 chr17 49089618 49089907 -36348573 + AluSx SINE Alu 1 290 -22 2173 128 0 3 chr17 49090013 49090311 -36348169 + AluSq SINE Alu 1 297 -16 405 305 60 6 chr17 49090462 49090629 -36347851 + MIR SINE MIR 81 256 -6 2282 104 3 0 chr17 49090927 49091226 -36347254 - AluY SINE Alu -11 300 1 1288 161 20 81 chr17 49091251 49091549 -36346931 - AluSq SINE Alu -32 281 2 275 0 29 0 chr17 49091634 49091669 -36346811 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 2336 97 10 0 chr17 49091700 49092000 -36346480 + AluSg SINE Alu 1 303 -7 2399 84 13 0 chr17 49093210 49093508 -36344972 - AluSx SINE Alu -10 302 1 600 203 17 17 chr17 49094216 49094334 -36344146 + FLAM_C SINE Alu 2 119 -24 312 48 0 0 chr17 49094335 49094377 -36344103 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 974 155 24 39 chr17 49094481 49094534 -36343946 + MER105 DNA DNA 1 53 -151 668 140 123 78 chr17 49094534 49094598 -36343882 - MER5A DNA MER1_type -1 188 128 2436 100 0 0 chr17 49094598 49094907 -36343573 + AluSc SINE Alu 1 309 0 668 140 123 78 chr17 49094907 49095021 -36343459 - MER5A DNA MER1_type -61 128 2 974 155 24 39 chr17 49095021 49095173 -36343307 + MER105 DNA DNA 53 203 -1 198 0 0 0 chr17 49096174 49096196 -36342284 + (A)n Simple_repeat Simple_repeat 1 22 0 574 240 8 0 chr17 49097046 49097171 -36341309 + MER94 DNA DNA 1 126 -8 410 320 10 0 chr17 49097199 49097302 -36341178 + MIR3 SINE MIR 64 167 -41 264 306 56 0 chr17 49098333 49098405 -36340075 - MIR SINE MIR -32 230 155 26 0 0 0 chr17 49098850 49098876 -36339604 + GC_rich Low_complexity Low_complexity 1 26 0 303 155 0 84 chr17 49099484 49099555 -36338925 - L2 LINE L2 -5 3308 3244 2535 60 13 0 chr17 49099731 49100030 -36338450 + AluSg SINE Alu 2 304 -6 2597 44 0 0 chr17 49100081 49100377 -36338103 + AluY SINE Alu 2 297 -14 391 250 164 0 chr17 49100452 49100580 -36337900 - MER46C DNA MER2_type -105 233 85 2215 110 3 0 chr17 49100604 49100894 -36337586 + AluSq SINE Alu 1 291 -22 1533 114 3 151 chr17 49100918 49101268 -36337212 - AluSx SINE Alu 0 302 5 1780 128 98 8 chr17 49101362 49101628 -36336852 - AluJb SINE Alu -22 290 1 513 283 97 65 chr17 49101644 49101736 -36336744 - MIR SINE MIR -5 257 169 2296 111 3 0 chr17 49101736 49102043 -36336437 - AluY SINE Alu -3 308 1 513 283 97 65 chr17 49102043 49102197 -36336283 - MIR SINE MIR -93 169 3 266 136 0 0 chr17 49102262 49102306 -36336174 - AluSp SINE Alu -6 294 251 1822 106 4 40 chr17 49102406 49102679 -36335801 - AluSp SINE Alu -47 266 4 311 274 213 6 chr17 49102695 49102859 -36335621 + MIR SINE MIR 65 262 0 183 313 75 15 chr17 49102859 49102926 -36335554 + L2 LINE L2 2993 3063 -209 25 0 0 0 chr17 49102926 49102951 -36335529 + AT_rich Low_complexity Low_complexity 1 25 0 2354 98 3 0 chr17 49103223 49103520 -36334960 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr17 49103571 49103591 -36334889 + (TA)n Simple_repeat Simple_repeat 2 21 0 237 222 0 19 chr17 49103591 49103645 -36334835 + G-rich Low_complexity Low_complexity 3 55 0 711 186 9 0 chr17 49103650 49103763 -36334717 - FLAM_C SINE Alu -18 115 2 2289 98 0 3 chr17 49104550 49104846 -36333634 - AluSg SINE Alu -10 300 6 30 0 0 0 chr17 49105266 49105296 -36333184 + AT_rich Low_complexity Low_complexity 1 30 0 2249 93 0 20 chr17 49105330 49105631 -36332849 - AluSc SINE Alu -14 295 1 1951 102 3 96 chr17 49105848 49106180 -36332300 - AluSx SINE Alu -11 301 1 2920 3 0 3 chr17 49106317 49106629 -36331851 - AluYa5 SINE Alu 0 311 1 867 184 58 76 chr17 49106978 49107201 -36331279 + MER20 DNA MER1_type 1 219 0 201 264 194 0 chr17 49107228 49107300 -36331180 + MIR SINE MIR 38 123 -139 470 211 224 85 chr17 49107307 49107530 -36330950 + MIR SINE MIR 8 261 -1 2495 70 3 0 chr17 49108168 49108466 -36330014 - AluSp SINE Alu -14 299 1 186 43 0 0 chr17 49108726 49108749 -36329731 + (A)n Simple_repeat Simple_repeat 1 23 0 430 302 135 16 chr17 49108784 49108976 -36329504 + MIR SINE MIR 46 260 -2 2169 129 24 12 chr17 49108990 49109330 -36329150 + MER2 DNA MER2_type 1 344 0 21 0 0 0 chr17 49110618 49110639 -36327841 + AT_rich Low_complexity Low_complexity 1 21 0 1674 154 33 7 chr17 49110642 49110914 -36327566 - AluJb SINE Alu -23 289 11 1038 175 0 27 chr17 49111515 49111698 -36326782 - MER5B DNA MER1_type 0 178 1 2479 79 0 0 chr17 49113245 49113550 -36324930 + AluSx SINE Alu 1 305 -7 415 228 129 144 chr17 49113568 49114108 -36324372 + L1ME4a LINE L1 5289 5822 -299 2553 31 3 0 chr17 49114108 49114396 -36324084 - AluY SINE Alu -22 289 1 415 228 129 144 chr17 49114396 49114412 -36324068 + L1ME4a LINE L1 5822 5837 -284 2269 120 0 0 chr17 49114412 49114720 -36323760 - AluSx SINE Alu -4 308 1 1351 159 175 16 chr17 49114966 49115223 -36323257 - AluJo SINE Alu -4 298 1 1978 105 3 25 chr17 49115232 49115552 -36322928 - AluSg SINE Alu 0 315 2 2187 100 3 28 chr17 49115556 49115876 -36322604 - AluSx SINE Alu 0 312 1 1431 156 12 44 chr17 49115940 49116220 -36322260 + AluJo SINE Alu 40 311 0 181 267 22 22 chr17 49116323 49116368 -36322112 - L2 LINE L2 -18 3254 3210 2688 38 0 6 chr17 49116411 49116724 -36321756 - AluY SINE Alu 0 311 1 1393 159 9 105 chr17 49116724 49117051 -36321429 - AluSq SINE Alu -5 298 2 393 22 0 0 chr17 49117057 49117103 -36321377 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 2414 53 3 33 chr17 49117110 49117409 -36321071 - AluY SINE Alu -21 290 1 982 150 52 7 chr17 49117531 49117684 -36320796 + AluJo SINE Alu 7 166 -146 1596 108 0 58 chr17 49117881 49118176 -36320304 + AluSg SINE Alu 14 291 -19 1779 174 20 13 chr17 49118195 49118494 -36319986 - AluJb SINE Alu -11 301 1 2473 88 0 0 chr17 49118529 49118837 -36319643 - AluSc SINE Alu -1 308 1 2429 89 0 19 chr17 49118852 49119166 -36319314 - AluSg SINE Alu -2 308 1 622 131 123 33 chr17 49119997 49120119 -36318361 - FLAM_C SINE Alu 0 133 1 2105 89 0 11 chr17 49120241 49120512 -36317968 - AluSx SINE Alu -11 301 34 2349 82 20 0 chr17 49120679 49120983 -36317497 - AluSp SINE Alu -2 311 2 651 241 181 19 chr17 49120991 49121257 -36317223 + L2 LINE L2 3005 3313 0 1498 168 106 7 chr17 49121286 49121560 -36316920 + AluJo SINE Alu 1 301 -11 2428 80 7 0 chr17 49121570 49121869 -36316611 - AluSx SINE Alu -11 301 1 742 242 62 0 chr17 49122097 49122291 -36316189 - LTR16A1 LTR ERVL 0 457 252 1030 176 0 0 chr17 49122377 49122542 -36315938 - FRAM SINE Alu 0 166 2 1066 220 16 32 chr17 49122543 49122793 -36315687 - L1MC/D LINE L1 -2254 5554 5309 975 264 42 25 chr17 49122955 49123239 -36315241 - MLT1J LTR MaLR -170 341 53 2350 78 0 7 chr17 49123240 49123546 -36314934 - AluSx SINE Alu -7 305 2 889 182 0 18 chr17 49123547 49123712 -36314768 - FRAM SINE Alu -14 162 1 256 297 0 0 chr17 49123722 49123786 -36314694 - MIR SINE MIR -155 107 44 1742 122 29 32 chr17 49124669 49124854 -36313626 - AluSx SINE Alu 0 312 127 2323 74 0 10 chr17 49124854 49125163 -36313317 - AluY SINE Alu -5 306 1 1742 122 29 32 chr17 49125163 49125289 -36313191 - AluSx SINE Alu -185 127 2 1733 149 0 20 chr17 49125289 49125591 -36312889 - AluJo SINE Alu -16 296 1 1233 143 0 0 chr17 49125595 49125770 -36312710 - FAM SINE Alu 0 175 1 485 310 80 88 chr17 49125802 49126267 -36312213 + L2 LINE L2 2811 3271 -1 426 186 0 0 chr17 49126417 49126503 -36311977 + (TGGA)n Simple_repeat Simple_repeat 4 89 0 365 84 0 5 chr17 49126794 49126997 -36311483 + AluSp SINE Alu 1 299 -4 921 155 0 7 chr17 49127424 49127572 -36310908 + AluJb SINE Alu 151 297 -15 635 231 222 42 chr17 49127692 49127904 -36310576 - MIR SINE MIR -10 252 3 1962 122 0 0 chr17 49128177 49128456 -36310024 - AluSx SINE Alu -13 299 21 289 270 0 16 chr17 49128830 49128893 -36309587 + MIR SINE MIR 8 69 -193 1068 74 0 0 chr17 49128895 49129030 -36309450 + AluJb SINE Alu 1 135 -177 1364 157 78 68 chr17 49129032 49129326 -36309154 + AluJb SINE Alu 1 297 -15 351 225 95 118 chr17 49129334 49129503 -36308977 + MIR SINE MIR 81 245 -17 2370 52 3 0 chr17 49129509 49129800 -36308680 - AluY SINE Alu -19 292 1 2347 67 6 13 chr17 49129802 49130114 -36308366 - AluSq SINE Alu -3 310 1 230 0 33 0 chr17 49130929 49130959 -36307521 + (CAA)n Simple_repeat Simple_repeat 2 32 0 258 101 53 0 chr17 49131192 49131238 -36307242 + L1MB1 LINE L1 6126 6168 0 207 152 0 0 chr17 49131266 49131312 -36307168 + A-rich Low_complexity Low_complexity 1 46 0 315 252 54 36 chr17 49132185 49132296 -36306184 + MIR SINE MIR 57 169 -93 2118 121 3 0 chr17 49132388 49132695 -36305785 - AluSx SINE Alu -4 308 1 1838 141 7 3 chr17 49132837 49133141 -36305339 - AluSx SINE Alu -7 305 1 1538 156 27 34 chr17 49133912 49134207 -36304273 + AluJo SINE Alu 1 293 -19 822 174 27 7 chr17 49134245 49134394 -36304086 + AluJb SINE Alu 138 289 -23 385 302 221 31 chr17 49134537 49134958 -36303522 + L2 LINE L2 1911 2411 -903 276 221 91 0 chr17 49135048 49135125 -36303355 - AluJo SINE Alu -146 156 73 375 178 132 90 chr17 49135132 49135347 -36303133 + MLT1D LTR MaLR 59 271 -196 255 77 26 0 chr17 49135472 49135511 -36302969 - L1MD1 LINE L1 -21 6221 6182 251 91 0 0 chr17 49135934 49135967 -36302513 + tRNA-Ile-ATT tRNA tRNA 2 34 -43 214 316 0 127 chr17 49136039 49136197 -36302283 + L2 LINE L2 3134 3271 -1 2118 148 39 43 chr17 49136598 49136650 -36301830 - L1MB8 LINE L1 -16 6162 6111 1992 98 18 3 chr17 49136650 49136936 -36301544 + AluSx SINE Alu 1 290 -22 2118 148 39 43 chr17 49136936 49137322 -36301158 - L1MB8 LINE L1 -67 6111 5726 1299 166 131 8 chr17 49137478 49137634 -36300846 - AluJo SINE Alu -11 291 156 270 0 0 0 chr17 49137634 49137664 -36300816 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1299 166 131 8 chr17 49137664 49137766 -36300714 - AluJo SINE Alu -146 156 1 1604 127 97 11 chr17 49137773 49137904 -36300576 - AluSx SINE Alu -21 291 173 2008 97 7 27 chr17 49137904 49138203 -36300277 - AluSg SINE Alu -17 293 1 1604 127 97 11 chr17 49138203 49138339 -36300141 - AluSx SINE Alu -139 173 1 2256 94 0 0 chr17 49138347 49138646 -36299834 - AluSg SINE Alu -11 299 1 2417 57 3 0 chr17 49138651 49138951 -36299529 - AluY SINE Alu -1 310 10 2214 72 14 3 chr17 49139344 49139637 -36298843 - AluSg SINE Alu -14 296 1 2156 70 28 0 chr17 49139945 49140229 -36298251 + AluY SINE Alu 1 292 -19 1979 137 13 0 chr17 49141113 49141419 -36297061 + AluSx SINE Alu 1 310 -2 455 239 53 9 chr17 49142669 49142782 -36295698 + L2 LINE L2 3195 3312 -1 2149 107 0 3 chr17 49143415 49143713 -36294767 - AluSx SINE Alu -15 297 1 216 0 0 0 chr17 49143772 49143796 -36294684 + (CA)n Simple_repeat Simple_repeat 1 24 0 336 102 0 0 chr17 49143801 49143850 -36294630 + (TA)n Simple_repeat Simple_repeat 2 50 0 1198 179 27 0 chr17 49143966 49144189 -36294291 + AluJb SINE Alu 1 229 -83 274 139 0 0 chr17 49144193 49144236 -36294244 + AluSp/q SINE Alu 191 233 -70 1153 97 0 0 chr17 49144236 49144391 -36294089 - AluSq SINE Alu -158 155 1 2004 113 3 0 chr17 49145362 49145664 -36292816 - AluSx SINE Alu 0 303 1 1500 155 11 11 chr17 49145863 49146127 -36292353 - AluJo SINE Alu -17 295 32 2280 69 30 7 chr17 49146400 49146703 -36291777 - AluSg SINE Alu 0 310 1 1865 148 17 0 chr17 49146846 49147167 -36291313 + AluSx SINE Alu 1 326 0 667 202 13 7 chr17 49147250 49147401 -36291079 + L1MB2 LINE L1 5978 6135 -36 1100 0 23 0 chr17 49147401 49147531 -36290949 + (CTATT)n Simple_repeat Simple_repeat 3 135 0 2046 89 3 18 chr17 49147531 49147813 -36290667 - AluY SINE Alu -32 279 2 968 113 0 0 chr17 49147817 49147950 -36290530 - FLAM_C SINE Alu 0 133 1 368 210 74 0 chr17 49148034 49148115 -36290365 - L1M4 LINE L1 -952 5194 5108 183 156 0 0 chr17 49148115 49148147 -36290333 + CT-rich Low_complexity Low_complexity 3 34 0 2143 119 0 6 chr17 49148159 49148470 -36290010 - AluSx SINE Alu -2 310 2 926 261 19 34 chr17 49148471 49148541 -36289939 - L1M4 LINE L1 -1028 5118 5048 2092 100 3 17 chr17 49148541 49148703 -36289777 - AluSx SINE Alu -17 295 137 2309 99 0 0 chr17 49148703 49149015 -36289465 - AluSx SINE Alu 0 312 1 2092 100 3 17 chr17 49149015 49149151 -36289329 - AluSx SINE Alu -175 137 1 926 261 19 34 chr17 49149151 49149405 -36289075 - L1M4 LINE L1 -1098 5048 4799 1073 64 14 0 chr17 49149506 49149647 -36288833 + AluSp/q SINE Alu 156 298 -15 2029 115 0 34 chr17 49149744 49150067 -36288413 + AluJo SINE Alu 1 312 0 342 80 0 0 chr17 49150156 49150206 -36288274 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 182 293 0 80 chr17 49150393 49150468 -36288012 + L3 LINE CR1 304 372 -1205 21 0 0 0 chr17 49150961 49150982 -36287498 + AT_rich Low_complexity Low_complexity 1 21 0 2106 99 7 0 chr17 49152140 49152432 -36286048 + AluSx SINE Alu 1 294 -18 610 148 50 0 chr17 49152535 49152636 -36285844 + MER41B LTR ERV1 530 635 0 792 221 7 0 chr17 49152636 49152781 -36285699 - AluJb SINE Alu -33 279 134 2149 82 14 0 chr17 49152781 49153073 -36285407 - AluSx SINE Alu -16 296 1 834 258 49 56 chr17 49153114 49153381 -36285099 - MER102b DNA MER1_type 0 341 77 2141 97 7 26 chr17 49154949 49155257 -36283223 - AluSx SINE Alu -10 302 1 310 183 155 0 chr17 49156086 49156157 -36282323 - L2 LINE L2 -11 3302 3221 944 173 0 0 chr17 49156170 49156332 -36282148 - AluSg/x SINE Alu -13 297 136 460 250 40 0 chr17 49156397 49156497 -36281983 - L2 LINE L2 0 3313 3210 383 105 141 168 chr17 49156507 49156626 -36281854 - Charlie5 DNA MER1_type 0 2624 2510 2091 114 0 35 chr17 49156626 49156797 -36281683 - AluSx SINE Alu -8 304 147 2186 100 0 0 chr17 49156797 49157086 -36281394 - AluSg SINE Alu -21 289 1 2091 114 0 35 chr17 49157086 49157229 -36281251 - AluSx SINE Alu -165 147 1 383 105 141 168 chr17 49157229 49157300 -36281180 - Charlie5 DNA MER1_type -114 2510 2439 1956 125 7 0 chr17 49157310 49157597 -36280883 + AluSx SINE Alu 10 298 -14 420 286 17 17 chr17 49158128 49158247 -36280233 + L2 LINE L2 3136 3254 -18 2047 126 3 0 chr17 49159150 49159451 -36279029 + AluSx SINE Alu 1 302 -10 25 0 0 0 chr17 49159502 49159527 -36278953 + AT_rich Low_complexity Low_complexity 1 25 0 961 157 6 22 chr17 49160806 49160984 -36277496 + AluSg/x SINE Alu 136 310 0 233 331 64 24 chr17 49161163 49161342 -36277138 + MIR SINE MIR 5 185 -77 2268 93 6 0 chr17 49161346 49161657 -36276823 - AluSp SINE Alu 0 313 1 315 0 0 0 chr17 49161682 49161717 -36276763 + (CA)n Simple_repeat Simple_repeat 2 36 0 252 0 0 0 chr17 49161738 49161766 -36276714 + (CA)n Simple_repeat Simple_repeat 2 29 0 2097 101 14 0 chr17 49161941 49162227 -36276253 - AluSx SINE Alu -20 292 3 1558 98 5 0 chr17 49162269 49162484 -36275996 + AluSq SINE Alu 1 216 -97 1085 97 0 0 chr17 49162484 49162628 -36275852 + AluSq SINE Alu 153 296 -17 835 165 72 67 chr17 49162818 49162904 -36275576 - MER3 DNA MER1_type 0 209 125 2288 62 7 0 chr17 49162904 49163193 -36275287 + AluSp SINE Alu 1 291 -22 180 0 0 0 chr17 49163193 49163213 -36275267 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 835 165 72 67 chr17 49163213 49163319 -36275161 - MER3 DNA MER1_type -83 126 15 188 338 62 12 chr17 49163892 49163972 -36274508 + L3b LINE CR1 1383 1466 -117 1812 111 23 0 chr17 49164185 49164447 -36274033 + AluSg SINE Alu 38 305 -5 629 177 115 23 chr17 49164475 49164605 -36273875 + AluJb SINE Alu 152 293 -19 2109 121 3 6 chr17 49164641 49164954 -36273526 + AluSx SINE Alu 1 312 0 182 319 58 29 chr17 49165734 49165803 -36272677 + MIR SINE MIR 58 128 -80 793 266 20 40 chr17 49165904 49166152 -36272328 + MIR SINE MIR 13 255 -7 180 240 100 0 chr17 49166166 49166216 -36272264 + MIR SINE MIR 204 258 -4 262 368 25 25 chr17 49166360 49166564 -36271916 - L2 LINE L2 -183 3089 2886 1850 137 0 3 chr17 49166658 49166973 -36271507 + AluJb SINE Alu 1 314 0 720 159 24 16 chr17 49166988 49167114 -36271366 + FLAM_A SINE Alu 10 136 -6 2144 112 7 0 chr17 49167114 49167418 -36271062 + AluSp SINE Alu 1 306 -7 2123 110 13 0 chr17 49167440 49167741 -36270739 + AluSx SINE Alu 1 305 -7 2241 78 0 26 chr17 49167782 49168091 -36270389 + AluY SINE Alu 1 301 -10 1959 100 0 0 chr17 49168369 49168638 -36269842 - AluY SINE Alu -24 287 19 1948 192 68 32 chr17 49168657 49169100 -36269380 + LTR2B LTR ERV1 32 490 0 23 0 0 0 chr17 49169129 49169152 -36269328 + AT_rich Low_complexity Low_complexity 1 23 0 2178 105 0 3 chr17 49169420 49169726 -36268754 - AluSx SINE Alu -7 305 1 2047 114 17 3 chr17 49170031 49170330 -36268150 + AluSq SINE Alu 2 304 -9 246 307 0 45 chr17 49170493 49170581 -36267899 + L2 LINE L2 3229 3312 -1 2112 87 0 11 chr17 49171038 49171358 -36267122 + AluSq SINE Alu 1 317 0 1781 146 7 20 chr17 49172020 49172314 -36266166 - AluJo SINE Alu -22 290 1 1777 142 78 0 chr17 49172948 49173229 -36265251 - AluJb SINE Alu -9 303 1 2240 111 27 0 chr17 49173501 49173799 -36264681 - AluSg SINE Alu -4 306 1 483 276 92 23 chr17 49174385 49174559 -36263921 + MIR3 SINE MIR 17 202 -6 2241 109 0 3 chr17 49174660 49174963 -36263517 - AluSx SINE Alu -10 302 1 246 273 172 0 chr17 49175482 49175581 -36262899 - MIR3 SINE MIR -15 193 78 1818 125 31 60 chr17 49176266 49176585 -36261895 - AluJb SINE Alu 0 312 3 1640 99 0 9 chr17 49176701 49176924 -36261556 - AluSg/x SINE Alu -18 292 72 2143 139 3 0 chr17 49176955 49177265 -36261215 + AluJb SINE Alu 1 311 -1 907 145 297 0 chr17 49177269 49177549 -36260931 + MER31B LTR ERV1 80 485 0 2422 97 0 0 chr17 49177676 49177976 -36260504 - AluSg SINE Alu -9 301 2 313 111 111 0 chr17 49178211 49178274 -36260206 + MER110A LTR ERV1 1 70 -398 1917 84 8 0 chr17 49178294 49178532 -36259948 + AluSq SINE Alu 1 240 -73 264 132 0 0 chr17 49178532 49178570 -36259910 + AluSg/x SINE Alu 214 251 -49 1005 134 7 0 chr17 49178570 49178719 -36259761 + AluJo/FRAM SINE Alu 156 305 -7 2321 164 46 59 chr17 49178727 49179271 -36259209 + LTR8A LTR ERV1 191 727 0 791 188 79 34 chr17 49179272 49179525 -36258955 + MER110A LTR ERV1 229 471 0 180 77 0 0 chr17 49179572 49179598 -36258882 + (TC)n Simple_repeat Simple_repeat 1 26 0 2197 93 10 14 chr17 49179598 49179888 -36258592 - AluSx SINE Alu -20 292 4 983 105 0 23 chr17 49179910 49180043 -36258437 - FLAM_C SINE Alu -1 132 3 1849 119 0 0 chr17 49180052 49180322 -36258158 - AluSx SINE Alu 0 317 48 2505 49 0 0 chr17 49180322 49180607 -36257873 + AluY SINE Alu 1 285 -26 243 0 0 0 chr17 49180611 49180638 -36257842 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 423 133 0 0 chr17 49180642 49180702 -36257778 - AluSx SINE Alu -249 61 2 234 0 0 0 chr17 49180848 49180874 -36257606 + (A)n Simple_repeat Simple_repeat 1 26 0 523 292 77 0 chr17 49180915 49181083 -36257397 - MIR SINE MIR -65 197 17 4283 112 24 13 chr17 49181107 49181549 -36256931 + MER41B LTR ERV1 1 437 -198 2375 100 3 0 chr17 49181549 49181859 -36256621 + AluY SINE Alu 1 311 0 2282 85 6 32 chr17 49181863 49182179 -36256301 + AluSq SINE Alu 1 308 -5 4283 112 24 13 chr17 49182179 49182359 -36256121 + MER41B LTR ERV1 439 635 0 1537 163 7 58 chr17 49182359 49182504 -36255976 - AluJb SINE Alu -33 279 155 2342 87 10 0 chr17 49182504 49182792 -36255688 - AluSg SINE Alu -16 294 4 1537 163 7 58 chr17 49182792 49182940 -36255540 - AluJb SINE Alu -157 155 1 2033 132 0 26 chr17 49183040 49183350 -36255130 - AluSx SINE Alu -10 302 1 1701 142 41 132 chr17 49183446 49183732 -36254748 - MER31B LTR ERV1 0 466 156 2198 108 7 3 chr17 49183732 49184029 -36254451 + AluSg SINE Alu 1 298 -12 1701 142 41 132 chr17 49184029 49184125 -36254355 - MER31B LTR ERV1 -310 156 139 791 173 0 8 chr17 49184125 49184258 -36254222 + FLAM_C SINE Alu 2 133 0 1701 142 41 132 chr17 49184258 49184381 -36254099 - MER31B LTR ERV1 -327 139 6 2108 116 3 28 chr17 49184383 49184701 -36253779 + AluSx SINE Alu 1 310 -2 767 206 0 0 chr17 49184736 49184867 -36253613 + FLAM_A SINE Alu 1 131 -2 419 216 0 0 chr17 49184930 49185004 -36253476 + Tigger2 DNA MER2_type 2645 2718 0 337 156 0 39 chr17 49185004 49185081 -36253399 + LTR37A LTR ERV1 349 422 -4 328 275 81 47 chr17 49185135 49185284 -36253196 - L1ME4a LINE L1 -234 5887 5734 2008 134 14 3 chr17 49185296 49185587 -36252893 - AluSq SINE Alu -19 294 1 1852 156 7 0 chr17 49185590 49185878 -36252602 - AluJb SINE Alu -18 294 5 2226 101 0 7 chr17 49185884 49186180 -36252300 - AluSx SINE Alu -18 294 1 804 105 0 9 chr17 49186370 49186484 -36251996 + AluSq/x SINE Alu 21 133 -179 2361 101 0 29 chr17 49186490 49186806 -36251674 + AluSx SINE Alu 3 309 -3 331 273 16 74 chr17 49187008 49187129 -36251351 + MIR3 SINE MIR 90 203 -5 1042 177 100 32 chr17 49187291 49187511 -36250969 + AluJo SINE Alu 66 300 -12 2409 72 3 0 chr17 49187518 49187809 -36250671 + AluSg SINE Alu 1 292 -18 2048 122 10 0 chr17 49188941 49189235 -36249245 - AluSx SINE Alu -15 297 1 326 268 18 36 chr17 49189413 49189576 -36248904 - MIR3 SINE MIR -20 188 30 794 131 0 97 chr17 49190777 49190922 -36247558 - FLAM_C SINE Alu 0 133 3 911 261 0 10 chr17 49190945 49191152 -36247328 - MIR SINE MIR -21 241 37 2127 117 27 0 chr17 49192008 49192308 -36246172 + AluSp SINE Alu 2 309 -4 2324 101 0 3 chr17 49192743 49193050 -36245430 - AluSx SINE Alu -6 306 1 1773 162 54 0 chr17 49193498 49193674 -36244806 - AluJb SINE Alu 0 312 112 189 0 0 0 chr17 49193674 49193695 -36244785 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1773 162 54 0 chr17 49193695 49193814 -36244666 - AluJb SINE Alu -200 112 1 400 217 238 26 chr17 49193924 49194135 -36244345 + MIR SINE MIR 3 246 -16 258 212 227 0 chr17 49194372 49194438 -36244042 - L2 LINE L2 -42 3230 3150 848 234 107 62 chr17 49194453 49194697 -36243783 - MIR SINE MIR 0 262 8 2316 105 0 10 chr17 49195087 49195391 -36243089 + AluSx SINE Alu 1 301 -11 225 273 15 0 chr17 49195476 49195542 -36242938 - Charlie8 DNA MER1_type -10 2407 2341 713 214 0 0 chr17 49195557 49195683 -36242797 + FLAM_A SINE Alu 1 126 -7 2211 122 3 25 chr17 49195710 49196029 -36242451 + AluSx SINE Alu 1 312 0 399 244 33 11 chr17 49196235 49196325 -36242155 - L1MC4 LINE L1 -1339 6703 6612 333 244 70 12 chr17 49196323 49196409 -36242071 - L1MC4 LINE L1 -1340 6702 6612 * 898 204 19 0 chr17 49196423 49196585 -36241895 - AluJb SINE Alu -8 304 140 2422 73 40 3 chr17 49196968 49197270 -36241210 - AluSp SINE Alu 0 313 1 2012 144 24 0 chr17 49197270 49197561 -36240919 - AluJo SINE Alu -14 298 1 2332 102 0 7 chr17 49198267 49198571 -36239909 + AluSx SINE Alu 1 302 -10 231 36 0 0 chr17 49198739 49198767 -36239713 + (CA)n Simple_repeat Simple_repeat 1 28 0 353 217 35 35 chr17 49198880 49198995 -36239485 + L1ME LINE L1 5708 5822 -299 2617 52 0 0 chr17 49199000 49199310 -36239170 + AluY SINE Alu 1 310 -1 2056 161 0 0 chr17 49199326 49199624 -36238856 + AluSx SINE Alu 1 298 -14 2299 91 3 22 chr17 49199747 49200065 -36238415 + AluSp SINE Alu 1 312 -1 2071 144 3 7 chr17 49200065 49200080 -36238400 - AluSp SINE Alu -8 305 291 180 0 0 0 chr17 49200080 49200100 -36238380 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2071 144 3 7 chr17 49200100 49200390 -36238090 - AluSp SINE Alu -22 291 1 2196 116 3 17 chr17 49200849 49201014 -36237466 - AluSx SINE Alu -13 299 138 2256 108 3 0 chr17 49201014 49201310 -36237170 - AluSp SINE Alu -16 297 1 2196 116 3 17 chr17 49201310 49201446 -36237034 - AluSx SINE Alu -174 138 2 2110 115 41 3 chr17 49203629 49203924 -36234556 - AluSx SINE Alu -6 306 1 2136 126 3 3 chr17 49203948 49204249 -36234231 - AluSp SINE Alu -12 301 1 2342 107 0 0 chr17 49204250 49204548 -36233932 - AluSx SINE Alu -14 298 1 691 31 20 20 chr17 49204983 49205081 -36233399 + (TTTC)n Simple_repeat Simple_repeat 3 100 0 1488 124 18 5 chr17 49205081 49205299 -36233181 - AluJb SINE Alu -32 280 60 220 313 9 52 chr17 49206845 49206960 -36231520 - MIR SINE MIR -69 139 30 530 296 48 34 chr17 49207005 49207211 -36231269 - MIR SINE MIR -51 211 3 1970 130 29 33 chr17 49207999 49208306 -36230174 + AluJb SINE Alu 1 306 -6 1569 170 6 79 chr17 49208359 49208540 -36229940 - AluJo SINE Alu -7 305 157 2168 139 0 0 chr17 49208540 49208834 -36229646 - AluSx SINE Alu -16 296 3 1569 170 6 79 chr17 49208834 49208981 -36229499 - AluJo SINE Alu -155 157 1 1875 182 0 13 chr17 49208991 49209299 -36229181 - AluJo SINE Alu -8 304 1 2200 118 3 3 chr17 49209310 49209614 -36228866 - AluSq SINE Alu -9 304 1 307 263 188 6 chr17 49209618 49209780 -36228700 - MIR SINE MIR -51 211 18 609 237 179 11 chr17 49210156 49210346 -36228134 - MIR SINE MIR -12 250 29 2334 107 3 0 chr17 49210482 49210780 -36227700 - AluSg SINE Alu -10 300 2 188 208 19 75 chr17 49211379 49211432 -36227048 - L2 LINE L2 -10 3262 3213 2426 97 0 0 chr17 49211767 49212075 -36226405 - AluSc SINE Alu -1 308 1 445 255 71 7 chr17 49212142 49212283 -36226197 - MIR SINE MIR -93 169 20 437 264 55 77 chr17 49212568 49212750 -36225730 + MIR SINE MIR 17 194 -68 875 241 45 15 chr17 49213273 49213472 -36225008 - MIR SINE MIR -56 206 2 1271 118 0 21 chr17 49213506 49213692 -36224788 - AluSq SINE Alu -12 301 120 416 222 0 0 chr17 49214890 49214971 -36223509 + MER81 DNA DNA 4 84 -30 369 203 0 25 chr17 49215093 49215172 -36223308 + MER5B DNA MER1_type 102 178 0 2373 102 0 7 chr17 49217264 49217568 -36220912 + AluSx SINE Alu 1 302 -10 603 260 116 6 chr17 49217572 49217745 -36220735 + MIR SINE MIR 44 235 -27 322 281 29 47 chr17 49218355 49218495 -36219985 - MIR SINE MIR -62 146 9 200 344 48 24 chr17 49218845 49218970 -36219510 + L3b LINE CR1 1325 1452 -131 222 213 21 0 chr17 49218975 49219022 -36219458 - L2 LINE L2 0 3313 3266 1832 167 0 16 chr17 49219426 49219732 -36218748 + AluJb SINE Alu 3 303 -9 2294 76 14 7 chr17 49219991 49220282 -36218198 + AluSg1 SINE Alu 1 293 -16 309 304 7 37 chr17 49222180 49222315 -36216165 + MIR3 SINE MIR 1 131 -77 1299 211 45 81 chr17 49222422 49222695 -36215785 - MLT1C LTR MaLR -9 458 208 1812 137 69 0 chr17 49222695 49222972 -36215508 - AluJb SINE Alu -16 296 1 1299 211 45 81 chr17 49222972 49223168 -36215312 - MLT1C LTR MaLR -259 208 6 33 0 0 23 chr17 49223362 49223383 -36215097 + AT_rich Low_complexity Low_complexity 1 21 -22 2179 132 3 0 chr17 49223383 49223678 -36214802 + AluSx SINE Alu 1 296 -16 33 0 0 23 chr17 49223678 49223700 -36214780 + AT_rich Low_complexity Low_complexity 21 43 0 428 244 29 113 chr17 49223894 49224100 -36214380 + MER112 DNA MER1_type 1 180 -80 2322 117 3 0 chr17 49224100 49224407 -36214073 + AluSx SINE Alu 1 308 -4 428 244 29 113 chr17 49224407 49224475 -36214005 + MER112 DNA MER1_type 180 252 -8 694 197 7 13 chr17 49224505 49224657 -36213823 + L1MB2 LINE L1 5087 5237 -909 1088 76 0 0 chr17 49224658 49224790 -36213690 + AluSq/x SINE Alu 1 132 -181 1736 114 0 0 chr17 49224791 49225018 -36213462 + AluSg/x SINE Alu 85 311 -1 4332 166 34 26 chr17 49225024 49225056 -36213424 + L1MB2 LINE L1 5224 5254 -917 2229 159 22 3 chr17 49225056 49225414 -36213066 - MLT1A1 LTR MaLR 0 365 1 4332 166 34 26 chr17 49225414 49225766 -36212714 + L1MB2 LINE L1 5254 5602 -569 2129 137 3 3 chr17 49225766 49226073 -36212407 + AluSx SINE Alu 1 307 -5 4332 166 34 26 chr17 49226073 49226632 -36211848 + L1MB2 LINE L1 5602 6169 -2 435 191 0 0 chr17 49226769 49226837 -36211643 + AluS SINE Alu 3 70 -242 913 112 0 22 chr17 49226837 49226971 -36211509 + AluSp/q SINE Alu 174 304 -9 2125 199 26 87 chr17 49227076 49227734 -36210746 - L1ME2 LINE L1 -66 6909 6292 1020 105 0 0 chr17 49227734 49227867 -36210613 - AluSg/x SINE Alu -4 306 174 397 193 173 64 chr17 49227868 49227998 -36210482 - L1ME2 LINE L1 -679 6294 6133 1829 153 0 36 chr17 49227998 49228168 -36210312 - AluJo SINE Alu -15 297 141 2398 99 0 0 chr17 49228168 49228462 -36210018 - AluSg SINE Alu -15 295 2 1829 153 0 36 chr17 49228462 49228599 -36209881 - AluJo SINE Alu -171 141 1 397 193 173 64 chr17 49228599 49228670 -36209810 - L1ME2 LINE L1 -840 6133 6071 371 210 74 0 chr17 49228683 49228764 -36209716 - L1ME2 LINE L1 -952 6005 5919 183 156 0 0 chr17 49228764 49228796 -36209684 + CT-rich Low_complexity Low_complexity 3 34 0 2245 119 3 10 chr17 49228808 49229119 -36209361 - AluSx SINE Alu -2 310 2 5747 223 29 55 chr17 49229127 49229190 -36209290 - L1ME2 LINE L1 -1034 5923 5860 2191 98 10 17 chr17 49229190 49229350 -36209130 - AluSx SINE Alu -17 295 136 2466 99 0 0 chr17 49229350 49229662 -36208818 - AluSx SINE Alu 0 312 1 2191 98 10 17 chr17 49229662 49229798 -36208682 - AluSx SINE Alu -176 136 1 5747 223 29 55 chr17 49229798 49230061 -36208419 - L1ME2 LINE L1 -1097 5860 5592 414 0 0 0 chr17 49230061 49230107 -36208373 + (TG)n Simple_repeat Simple_repeat 2 47 0 5747 223 29 55 chr17 49230107 49230648 -36207832 - L1ME2 LINE L1 -1365 5592 5038 2244 80 28 14 chr17 49230648 49230934 -36207546 - AluSc SINE Alu -19 290 1 5747 223 29 55 chr17 49230934 49231278 -36207202 - L1ME2 LINE L1 -1919 5038 4687 2195 113 3 0 chr17 49231278 49231604 -36206876 + AluSp SINE Alu 1 327 0 5747 223 29 55 chr17 49231604 49231971 -36206509 - L1ME2 LINE L1 -2270 4687 4399 1966 143 37 3 chr17 49231971 49232271 -36206209 - AluSx SINE Alu 0 312 3 5747 223 29 55 chr17 49232271 49232652 -36205828 - L1ME2 LINE L1 -2558 4399 4010 371 91 4 12 chr17 49232660 49232892 -36205588 + AluSx SINE Alu 1 301 0 353 204 68 43 chr17 49232902 49233011 -36205469 - L1ME2 LINE L1 -2947 4010 3894 2557 80 3 0 chr17 49233011 49233322 -36205158 - AluSp SINE Alu -1 312 1 353 204 68 43 chr17 49233322 49233374 -36205106 - L1ME2 LINE L1 -3063 3894 3845 1884 157 3 3 chr17 49233383 49233670 -36204810 - AluJb SINE Alu -12 300 14 297 125 0 0 chr17 49233695 49233743 -36204737 - U5 snRNA snRNA -68 48 1 816 247 82 18 chr17 49233743 49234083 -36204397 - L1ME2 LINE L1 -4970 1989 1628 1228 168 79 0 chr17 49234099 49234302 -36204178 - AluJb SINE Alu -10 302 84 379 180 40 40 chr17 49234302 49234366 -36204114 - L1ME2 LINE L1 -5222 1725 1662 2586 65 0 3 chr17 49234366 49234672 -36203808 - AluSc SINE Alu -4 305 1 379 180 40 40 chr17 49234672 49234771 -36203709 - L1ME2 LINE L1 -5284 1663 1453 745 193 0 14 chr17 49234774 49234919 -36203561 - FLAM_C SINE Alu 0 143 1 274 169 6 188 chr17 49234939 49234977 -36203503 - L1ME2 LINE L1 -5382 1565 1522 213 39 0 0 chr17 49234977 49235003 -36203477 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 274 169 6 188 chr17 49235003 49235020 -36203460 - L1ME2 LINE L1 -5425 1522 1504 1949 141 3 11 chr17 49235020 49235329 -36203151 - AluSq SINE Alu 0 307 1 274 169 6 188 chr17 49235329 49235431 -36203049 - L1ME2 LINE L1 -5443 1504 1435 248 196 18 0 chr17 49235431 49235487 -36202993 + (TA)n Simple_repeat Simple_repeat 1 57 0 1634 175 0 24 chr17 49235487 49235779 -36202701 - AluJo SINE Alu -27 285 1 746 147 0 0 chr17 49236165 49236313 -36202167 - AluSp/q SINE Alu 0 331 184 1830 134 15 8 chr17 49236333 49236623 -36201857 + AluJb SINE Alu 14 305 0 195 336 136 0 chr17 49236677 49236817 -36201663 - L3b LINE CR1 -110 1473 1315 816 161 23 0 chr17 49236843 49236973 -36201507 + FLAM_A SINE Alu 1 133 0 215 350 60 45 chr17 49237411 49237611 -36200869 - L2 LINE L2 -25 3247 3045 1452 143 114 29 chr17 49238311 49238584 -36199896 + AluJo SINE Alu 1 296 -16 2260 103 0 16 chr17 49238596 49238907 -36199573 + AluY SINE Alu 3 308 -3 971 182 6 0 chr17 49238907 49239066 -36199414 + AluJb SINE Alu 134 293 -19 452 245 61 27 chr17 49239653 49239800 -36198680 - MER5A DNA MER1_type -31 158 7 258 283 9 62 chr17 49239838 49239951 -36198529 - MER5A DNA MER1_type -29 160 54 521 96 0 17 chr17 49239970 49240248 -36198232 + AluSg SINE Alu 1 312 0 1019 207 0 25 chr17 49240395 49240598 -36197882 - AluSx SINE Alu -114 198 1 2147 133 16 3 chr17 49241335 49241644 -36196836 + 7SLRNA srpRNA srpRNA 1 313 -7 1638 191 17 10 chr17 49241755 49242054 -36196426 - AluJo SINE Alu -11 301 1 384 221 7 88 chr17 49242655 49242791 -36195689 - MIR SINE MIR -56 206 82 974 202 0 0 chr17 49243039 49243212 -36195268 - AluJb SINE Alu -20 292 120 823 89 49 0 chr17 49243212 49243335 -36195145 - AluSg/x SINE Alu -16 296 168 1790 164 6 22 chr17 49243338 49243673 -36194807 - AluSx SINE Alu 0 312 1 214 196 20 0 chr17 49243754 49243805 -36194675 + (ATG)n Simple_repeat Simple_repeat 3 54 0 435 216 207 0 chr17 49243844 49243960 -36194520 - MIR SINE MIR -44 218 79 21 0 0 0 chr17 49244192 49244213 -36194267 + AT_rich Low_complexity Low_complexity 1 21 0 2072 106 0 33 chr17 49245057 49245359 -36193121 + AluSq SINE Alu 1 292 -21 624 245 109 0 chr17 49246328 49246475 -36192005 + MER45A DNA AcHobo 16 178 0 2290 101 3 0 chr17 49246802 49247100 -36191380 - AluSc SINE Alu -10 299 1 2333 119 0 0 chr17 49247199 49247511 -36190969 + AluSq SINE Alu 1 312 -1 337 299 10 10 chr17 49247669 49247766 -36190714 + L2 LINE L2 3176 3272 0 219 321 77 65 chr17 49248346 49248468 -36190012 + MER5A DNA MER1_type 19 145 -44 2254 83 31 0 chr17 49248468 49248816 -36189664 + AluSp SINE Alu 1 313 0 219 321 77 65 chr17 49248816 49248861 -36189619 + MER5A DNA MER1_type 145 188 -1 1789 132 31 24 chr17 49248940 49249228 -36189252 + AluJo SINE Alu 1 290 -22 1425 195 60 17 chr17 49250412 49250613 -36187867 - AluJo SINE Alu 0 339 118 540 0 0 0 chr17 49250613 49250673 -36187807 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 1425 195 60 17 chr17 49250673 49250797 -36187683 - AluJo SINE Alu -221 118 1 317 309 62 0 chr17 49250856 49250953 -36187527 - MIR SINE MIR -57 205 103 424 206 111 16 chr17 49252476 49252602 -36185878 - MIR SINE MIR -21 241 104 258 136 0 0 chr17 49253110 49253154 -36185326 + (TTCC)n Simple_repeat Simple_repeat 2 45 0 506 252 55 8 chr17 49253625 49253752 -36184728 - FLAM_C SINE Alu 0 133 1 1481 134 102 39 chr17 49256224 49256508 -36181972 - AluJo SINE Alu -10 302 1 536 307 102 36 chr17 49257980 49258400 -36180080 + L1MC4a LINE L1 5297 5930 -1878 748 140 7 67 chr17 49258556 49258706 -36179774 - FLAM_C SINE Alu -1 142 2 198 171 0 0 chr17 49260672 49260713 -36177767 + A-rich Low_complexity Low_complexity 2 42 0 497 16 16 0 chr17 49260734 49260796 -36177684 + (CA)n Simple_repeat Simple_repeat 2 64 0 223 175 16 16 chr17 49262883 49262946 -36175534 + (TA)n Simple_repeat Simple_repeat 1 63 0 2176 102 28 0 chr17 49263551 49263835 -36174645 + AluSx SINE Alu 1 292 -20 285 271 21 41 chr17 49264227 49264344 -36174136 - MIR SINE MIR -65 143 37 346 237 113 32 chr17 49264927 49265113 -36173367 + L1MC5 LINE L1 7499 7699 -262 761 148 8 8 chr17 49265127 49265249 -36173231 + FLAM_C SINE Alu 12 133 -10 1195 182 133 4 chr17 49265254 49265518 -36172962 + AluJo SINE Alu 1 298 -4 201 74 0 0 chr17 49265562 49265589 -36172891 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 1254 73 0 0 chr17 49265646 49265796 -36172684 + AluY SINE Alu 36 185 -126 285 29 0 0 chr17 49265813 49265847 -36172633 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 379 246 32 8 chr17 49265860 49265986 -36172494 + L1MC5 LINE L1 7808 7936 -25 2408 100 0 0 chr17 49265987 49266287 -36172193 + AluSg SINE Alu 1 300 -10 2032 126 44 0 chr17 49266737 49266910 -36171570 - AluSx SINE Alu -5 307 114 216 0 0 0 chr17 49266910 49266934 -36171546 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2032 126 44 0 chr17 49266934 49267054 -36171426 - AluSx SINE Alu -198 114 1 1769 174 0 0 chr17 49267215 49267566 -36170914 + AluJb SINE Alu 1 351 0 504 198 9 0 chr17 49267686 49267792 -36170688 - FRAM SINE Alu -6 170 64 562 100 33 0 chr17 49267811 49267901 -36170579 - AluJ/FLAM SINE Alu -219 93 1 216 268 62 89 chr17 49267901 49268013 -36170467 + MIR SINE MIR 121 229 -33 504 220 0 0 chr17 49269614 49269732 -36168748 + CT-rich Low_complexity Low_complexity 1 118 0 2121 131 0 6 chr17 49269748 49270062 -36168418 - AluSx SINE Alu 0 312 1 1914 126 33 0 chr17 49270239 49270540 -36167940 - AluJb SINE Alu 0 343 34 305 271 47 62 chr17 49272090 49272219 -36166261 - MIR3 SINE MIR -17 191 65 322 227 168 88 chr17 49273206 49273444 -36165036 + HAL1 LINE L1 1046 1302 -1205 240 339 0 17 chr17 49273461 49273579 -36164901 + GA-rich Low_complexity Low_complexity 1 116 0 24 0 0 0 chr17 49273952 49273976 -36164504 + GC_rich Low_complexity Low_complexity 1 24 0 250 212 94 24 chr17 49274516 49274601 -36163879 - MIR SINE MIR -50 212 122 2088 153 0 6 chr17 49274720 49275033 -36163447 + AluSx SINE Alu 1 311 -1 24 32 0 0 chr17 49275303 49275334 -36163146 + AT_rich Low_complexity Low_complexity 1 31 0 1644 232 23 25 chr17 49275343 49275783 -36162697 - L1ME3 LINE L1 -8 6154 5716 1159 235 6 56 chr17 49275865 49276184 -36162296 - AluSq SINE Alu 0 303 1 1812 167 0 47 chr17 49276326 49276643 -36161837 - AluSx SINE Alu -10 302 1 427 184 35 46 chr17 49276643 49276730 -36161750 - FLAM_A SINE Alu -50 92 7 565 195 7 41 chr17 49276734 49276879 -36161601 - L1ME3 LINE L1 -432 5730 5591 842 88 20 7 chr17 49278664 49278812 -36159668 + (GA)n Simple_repeat Simple_repeat 1 150 0 195 42 0 0 chr17 49280200 49280224 -36158256 + (TG)n Simple_repeat Simple_repeat 1 24 0 27 49 0 0 chr17 49285726 49285767 -36152713 + AT_rich Low_complexity Low_complexity 1 41 0 688 183 9 0 chr17 49285802 49285917 -36152563 + FLAM_C SINE Alu 3 118 -25 1916 162 4 0 chr17 49286043 49286321 -36152159 + AluSx SINE Alu 1 279 -33 189 0 0 0 chr17 49286325 49286346 -36152134 + (TAA)n Simple_repeat Simple_repeat 2 22 0 450 120 0 0 chr17 49288414 49288489 -36149991 + (TG)n Simple_repeat Simple_repeat 2 76 0 326 314 51 15 chr17 49289769 49289906 -36148574 - L1ME4a LINE L1 -253 5868 5727 1318 173 57 85 chr17 49289921 49290239 -36148241 + AluJo SINE Alu 1 309 -3 284 193 0 0 chr17 49290260 49290317 -36148163 + Alu SINE Alu 246 302 0 25 51 0 0 chr17 49290356 49290395 -36148085 + AT_rich Low_complexity Low_complexity 1 39 0 339 236 102 0 chr17 49290485 49290612 -36147868 - L1ME4a LINE L1 -178 5943 5804 602 177 31 0 chr17 49290779 49290875 -36147605 + FRAM SINE Alu 1 94 -82 2035 142 0 22 chr17 49290875 49291186 -36147294 - AluJb SINE Alu -7 305 2 525 263 0 0 chr17 49291225 49291356 -36147124 + L1ME3 LINE L1 6004 6134 -28 28 0 0 0 chr17 49291783 49291811 -36146669 + AT_rich Low_complexity Low_complexity 1 28 0 1642 203 60 73 chr17 49292295 49292463 -36146017 - L1ME3 LINE L1 -11 6151 5982 2059 101 47 30 chr17 49292463 49292761 -36145719 - AluSx SINE Alu -9 303 1 1642 203 60 73 chr17 49292761 49293155 -36145325 - L1ME3 LINE L1 -180 5982 5596 1915 129 48 10 chr17 49293260 49293554 -36144926 - AluSx SINE Alu -7 305 1 194 0 0 37 chr17 49293554 49293581 -36144899 + (TTTC)n Simple_repeat Simple_repeat 1 26 0 2085 129 3 10 chr17 49293944 49294247 -36144233 - AluSx SINE Alu -11 301 1 2184 130 3 0 chr17 49294269 49294570 -36143910 - AluSx SINE Alu -4 308 7 2400 98 0 0 chr17 49295621 49295926 -36142554 - AluSx SINE Alu -6 306 2 1686 170 25 7 chr17 49295930 49296241 -36142239 - AluJo SINE Alu 0 316 1 29 0 0 0 chr17 49296939 49296968 -36141512 + AT_rich Low_complexity Low_complexity 1 29 0 2128 143 0 10 chr17 49297165 49297479 -36141001 + AluSx SINE Alu 1 311 -1 2259 90 14 0 chr17 49298003 49298330 -36140150 + AluSp SINE Alu 1 331 0 860 161 0 29 chr17 49298592 49298729 -36139751 - FLAM_A SINE Alu 0 133 1 328 239 302 13 chr17 49299404 49299563 -36138917 - MIR SINE MIR -25 237 33 2018 139 3 22 chr17 49299822 49300138 -36138342 - AluJb SINE Alu -2 310 1 316 286 16 63 chr17 49300209 49300335 -36138145 + L2 LINE L2 3189 3308 -5 375 217 66 26 chr17 49300345 49300497 -36137983 + L1MC4a LINE L1 5865 6022 -1786 22 0 0 0 chr17 49300595 49300617 -36137863 + AT_rich Low_complexity Low_complexity 1 22 0 265 320 17 24 chr17 49300790 49300962 -36137518 + GA-rich Low_complexity Low_complexity 2 295 0 784 170 72 67 chr17 49302998 49303084 -36135396 - MER3 DNA MER1_type 0 209 125 2428 62 7 0 chr17 49303084 49303373 -36135107 + AluSp SINE Alu 1 291 -22 180 0 0 0 chr17 49303373 49303393 -36135087 + (TTAAA)n Simple_repeat Simple_repeat 2 21 0 784 170 72 67 chr17 49303393 49303499 -36134981 - MER3 DNA MER1_type -83 126 15 188 338 62 12 chr17 49304072 49304152 -36134328 + L3b LINE CR1 1383 1466 -117 1988 110 19 0 chr17 49304365 49304628 -36133852 + AluSg SINE Alu 38 305 -5 659 199 106 21 chr17 49304645 49304786 -36133694 + AluJb SINE Alu 141 293 -19 2267 121 3 6 chr17 49304822 49305135 -36133345 + AluSx SINE Alu 1 312 0 180 319 58 29 chr17 49305915 49305984 -36132496 + MIR SINE MIR 58 128 -80 789 266 20 40 chr17 49306085 49306333 -36132147 + MIR SINE MIR 13 255 -7 261 368 25 25 chr17 49306541 49306745 -36131735 - L2 LINE L2 -183 3089 2886 1952 134 3 3 chr17 49306839 49307153 -36131327 + AluJb SINE Alu 1 314 0 741 175 24 0 chr17 49307168 49307294 -36131186 + FLAM_A SINE Alu 10 138 -4 2294 117 7 0 chr17 49307294 49307603 -36130877 + AluSp SINE Alu 1 311 -2 2272 110 13 0 chr17 49307620 49307921 -36130559 + AluSx SINE Alu 1 305 -7 2385 78 0 26 chr17 49307962 49308271 -36130209 + AluY SINE Alu 1 301 -10 2088 100 0 0 chr17 49308549 49308818 -36129662 - AluY SINE Alu -24 287 19 1834 188 70 32 chr17 49308837 49309279 -36129201 + LTR2B LTR ERV1 32 490 0 23 0 0 0 chr17 49309308 49309331 -36129149 + AT_rich Low_complexity Low_complexity 1 23 0 2328 105 0 3 chr17 49309599 49309905 -36128575 - AluSx SINE Alu -7 305 1 2200 114 17 3 chr17 49310210 49310509 -36127971 + AluSq SINE Alu 2 304 -9 242 307 0 45 chr17 49310672 49310760 -36127720 + L2 LINE L2 3229 3312 -1 2248 87 0 11 chr17 49311217 49311537 -36126943 + AluSq SINE Alu 1 317 0 1926 148 7 20 chr17 49312196 49312493 -36125987 - AluJo SINE Alu -19 293 1 1811 140 77 0 chr17 49313127 49313412 -36125068 - AluJb SINE Alu -5 307 1 2240 111 27 0 chr17 49313684 49313982 -36124498 - AluSg SINE Alu -4 306 1 483 276 92 23 chr17 49314568 49314742 -36123738 + MIR3 SINE MIR 17 202 -6 2241 109 0 3 chr17 49314843 49315146 -36123334 - AluSx SINE Alu -10 302 1 246 273 172 0 chr17 49315665 49315764 -36122716 - MIR3 SINE MIR -15 193 78 1818 125 31 60 chr17 49316449 49316768 -36121712 - AluJb SINE Alu 0 312 3 1640 99 0 9 chr17 49316884 49317107 -36121373 - AluSg/x SINE Alu -18 294 74 2087 145 3 0 chr17 49317138 49317448 -36121032 + AluJb SINE Alu 1 311 -1 907 145 297 0 chr17 49317452 49317732 -36120748 + MER31B LTR ERV1 80 485 0 1801 164 17 0 chr17 49317859 49318152 -36120328 - AluSx SINE Alu -9 303 6 1299 229 7 7 chr17 49318167 49318459 -36120021 - AluJb SINE Alu -16 296 5 2226 101 0 7 chr17 49318465 49318761 -36119719 - AluSx SINE Alu -18 294 1 804 105 0 9 chr17 49318951 49319065 -36119415 + AluSq/x SINE Alu 21 133 -179 2361 101 0 29 chr17 49319071 49319387 -36119093 + AluSx SINE Alu 3 309 -3 331 273 16 74 chr17 49319589 49319710 -36118770 + MIR3 SINE MIR 90 203 -5 1042 177 100 32 chr17 49319872 49320092 -36118388 + AluJo SINE Alu 66 300 -12 2409 72 3 0 chr17 49320099 49320390 -36118090 + AluSg SINE Alu 1 292 -18 2048 122 10 0 chr17 49321524 49321818 -36116662 - AluSx SINE Alu -15 297 1 326 268 18 36 chr17 49321996 49322159 -36116321 - MIR3 SINE MIR -20 188 30 794 131 0 97 chr17 49323361 49323506 -36114974 - FLAM_C SINE Alu 0 133 3 911 261 0 10 chr17 49323529 49323736 -36114744 - MIR SINE MIR -21 241 37 2127 117 27 0 chr17 49324592 49324892 -36113588 + AluSp SINE Alu 2 309 -4 2359 101 0 0 chr17 49325327 49325633 -36112847 - AluSx SINE Alu -6 306 1 1773 162 54 0 chr17 49326081 49326257 -36112223 - AluJb SINE Alu 0 312 112 189 0 0 0 chr17 49326257 49326278 -36112202 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1773 162 54 0 chr17 49326278 49326397 -36112083 - AluJb SINE Alu -200 112 1 400 217 238 26 chr17 49326507 49326718 -36111762 + MIR SINE MIR 3 246 -16 258 212 227 0 chr17 49326955 49327021 -36111459 - L2 LINE L2 -42 3230 3150 848 234 107 62 chr17 49327036 49327280 -36111200 - MIR SINE MIR 0 262 8 2316 105 0 10 chr17 49327670 49327974 -36110506 + AluSx SINE Alu 1 301 -11 225 273 15 0 chr17 49328059 49328125 -36110355 - Charlie8 DNA MER1_type -10 2407 2341 713 214 0 0 chr17 49328140 49328266 -36110214 + FLAM_A SINE Alu 1 126 -7 2211 122 3 25 chr17 49328293 49328612 -36109868 + AluSx SINE Alu 1 312 0 399 244 33 11 chr17 49328818 49328908 -36109572 - L1MC4 LINE L1 -1339 6703 6612 333 244 70 12 chr17 49328906 49328992 -36109488 - L1MC4 LINE L1 -1340 6702 6612 * 898 204 19 0 chr17 49329006 49329168 -36109312 - AluJb SINE Alu -8 304 140 2422 73 40 3 chr17 49329551 49329853 -36108627 - AluSp SINE Alu 0 313 1 2012 144 24 0 chr17 49329853 49330144 -36108336 - AluJo SINE Alu -14 298 1 2332 102 0 7 chr17 49330850 49331154 -36107326 + AluSx SINE Alu 1 302 -10 231 36 0 0 chr17 49331322 49331350 -36107130 + (CA)n Simple_repeat Simple_repeat 1 28 0 353 217 35 35 chr17 49331463 49331578 -36106902 + L1ME LINE L1 5708 5822 -299 2574 52 3 0 chr17 49331583 49331892 -36106588 + AluY SINE Alu 1 310 -1 2056 161 0 0 chr17 49331908 49332206 -36106274 + AluSx SINE Alu 1 298 -14 2358 95 3 13 chr17 49332329 49332645 -36105835 + AluSp SINE Alu 1 313 0 2071 144 3 7 chr17 49332646 49332661 -36105819 - AluSp SINE Alu -8 305 291 180 0 0 0 chr17 49332661 49332681 -36105799 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2071 144 3 7 chr17 49332681 49332971 -36105509 - AluSp SINE Alu -22 291 1 2196 116 3 17 chr17 49333430 49333595 -36104885 - AluSx SINE Alu -13 299 138 2288 105 3 0 chr17 49333595 49333891 -36104589 - AluSp SINE Alu -16 297 1 2196 116 3 17 chr17 49333891 49334027 -36104453 - AluSx SINE Alu -174 138 2 2110 115 41 3 chr17 49336210 49336505 -36101975 - AluSx SINE Alu -6 306 1 2136 126 3 3 chr17 49336529 49336830 -36101650 - AluSp SINE Alu -12 301 1 2342 107 0 0 chr17 49336831 49337129 -36101351 - AluSx SINE Alu -14 298 1 691 31 20 20 chr17 49337564 49337662 -36100818 + (TTTC)n Simple_repeat Simple_repeat 3 100 0 1488 124 18 5 chr17 49337662 49337880 -36100600 - AluJb SINE Alu -32 280 60 220 313 9 52 chr17 49339426 49339541 -36098939 - MIR SINE MIR -69 139 30 530 296 48 34 chr17 49339586 49339792 -36098688 - MIR SINE MIR -51 211 3 1895 124 31 34 chr17 49340595 49340886 -36097594 + AluJb SINE Alu 17 306 -6 1569 170 6 79 chr17 49340939 49341120 -36097360 - AluJo SINE Alu -7 305 157 2168 139 0 0 chr17 49341120 49341414 -36097066 - AluSx SINE Alu -16 296 3 1569 170 6 79 chr17 49341414 49341561 -36096919 - AluJo SINE Alu -155 157 1 1875 182 0 13 chr17 49341571 49341879 -36096601 - AluJo SINE Alu -8 304 1 2200 118 3 3 chr17 49341890 49342194 -36096286 - AluSq SINE Alu -9 304 1 307 263 188 6 chr17 49342198 49342360 -36096120 - MIR SINE MIR -51 211 18 609 237 179 11 chr17 49342736 49342926 -36095554 - MIR SINE MIR -12 250 29 2334 107 3 0 chr17 49343062 49343360 -36095120 - AluSg SINE Alu -10 300 2 188 208 19 75 chr17 49343959 49344012 -36094468 - L2 LINE L2 -10 3262 3213 2426 97 0 0 chr17 49344347 49344655 -36093825 - AluSc SINE Alu -1 308 1 445 255 71 7 chr17 49344722 49344863 -36093617 - MIR SINE MIR -93 169 20 437 264 55 77 chr17 49345148 49345330 -36093150 + MIR SINE MIR 17 194 -68 875 241 45 15 chr17 49345853 49346052 -36092428 - MIR SINE MIR -56 206 2 1271 118 0 21 chr17 49346086 49346272 -36092208 - AluSq SINE Alu -12 301 120 416 222 0 0 chr17 49347470 49347551 -36090929 + MER81 DNA DNA 4 84 -30 369 203 0 25 chr17 49347673 49347752 -36090728 + MER5B DNA MER1_type 102 178 0 2373 102 0 7 chr17 49349844 49350148 -36088332 + AluSx SINE Alu 1 302 -10 603 260 116 6 chr17 49350152 49350325 -36088155 + MIR SINE MIR 44 235 -27 322 281 29 47 chr17 49350935 49351075 -36087405 - MIR SINE MIR -62 146 9 200 344 48 24 chr17 49351425 49351550 -36086930 + L3b LINE CR1 1325 1452 -131 222 213 21 0 chr17 49351555 49351602 -36086878 - L2 LINE L2 0 3313 3266 1832 167 0 16 chr17 49352006 49352312 -36086168 + AluJb SINE Alu 3 303 -9 2294 76 14 7 chr17 49352571 49352862 -36085618 + AluSg1 SINE Alu 1 293 -16 309 304 7 37 chr17 49354760 49354895 -36083585 + MIR3 SINE MIR 1 131 -77 1299 211 45 81 chr17 49355002 49355275 -36083205 - MLT1C LTR MaLR -9 458 208 1812 137 69 0 chr17 49355275 49355552 -36082928 - AluJb SINE Alu -16 296 1 1299 211 45 81 chr17 49355552 49355748 -36082732 - MLT1C LTR MaLR -259 208 6 33 0 0 23 chr17 49355942 49355963 -36082517 + AT_rich Low_complexity Low_complexity 1 21 -22 2179 132 3 0 chr17 49355963 49356258 -36082222 + AluSx SINE Alu 1 296 -16 33 0 0 23 chr17 49356258 49356280 -36082200 + AT_rich Low_complexity Low_complexity 21 43 0 428 244 29 113 chr17 49356474 49356680 -36081800 + MER112 DNA MER1_type 1 180 -80 2322 117 3 0 chr17 49356680 49356987 -36081493 + AluSx SINE Alu 1 308 -4 428 244 29 113 chr17 49356987 49357055 -36081425 + MER112 DNA MER1_type 180 252 -8 694 197 7 13 chr17 49357085 49357237 -36081243 + L1MB2 LINE L1 5087 5237 -909 1088 76 0 0 chr17 49357238 49357370 -36081110 + AluSq/x SINE Alu 1 132 -181 1736 114 0 0 chr17 49357371 49357598 -36080882 + AluSg/x SINE Alu 83 309 -1 3456 153 23 18 chr17 49357604 49357636 -36080844 + L1MB2 LINE L1 5224 5254 -917 2229 159 22 3 chr17 49357636 49357994 -36080486 - MLT1A1 LTR MaLR 0 365 1 3456 153 23 18 chr17 49357994 49358346 -36080134 + L1MB2 LINE L1 5254 5609 -562 2129 137 3 3 chr17 49358346 49358653 -36079827 + AluSx SINE Alu 1 307 -5 3456 153 23 18 chr17 49358653 49358957 -36079523 + L1MB2 LINE L1 5609 5910 -261 222 229 174 83 chr17 49359157 49359266 -36079214 - L2 LINE L2 -3 3269 3151 1095 101 5 77 chr17 49459531 49459739 -35978741 - L1MA5A LINE L1 -1 6296 6104 1009 138 0 50 chr17 49459739 49459898 -35978582 - AluSg/x SINE Alu -28 284 134 2234 119 0 10 chr17 49459898 49460209 -35978271 - AluSx SINE Alu -4 308 1 371 216 11 0 chr17 49460211 49460299 -35978181 - L1MA5A LINE L1 -176 6121 6033 468 45 15 0 chr17 49460430 49460496 -35977984 - MER41A LTR ERV1 -88 466 400 874 89 0 0 chr17 49460496 49460620 -35977860 + MER41A LTR ERV1 431 554 0 7493 127 36 31 chr17 49460620 49460924 -35977556 + MER41A-int LTR ERV1 1 302 -5644 2421 89 0 3 chr17 49460924 49461227 -35977253 + AluSc SINE Alu 1 302 -7 7493 127 36 31 chr17 49461227 49462163 -35976317 + MER41A-int LTR ERV1 302 1247 -4699 307 350 19 45 chr17 49462263 49462420 -35976060 + HAL1 LINE L1 1310 1462 -1045 1323 101 79 0 chr17 49462420 49462609 -35975871 + AluSg SINE Alu 1 204 -106 314 113 19 0 chr17 49462710 49462763 -35975717 - Alu SINE Alu -246 55 2 911 164 9 93 chr17 49462784 49463009 -35975471 - MLT1D LTR MaLR -295 210 5 2217 104 0 0 chr17 49463337 49463615 -35974865 + AluSq SINE Alu 1 278 -35 514 97 0 0 chr17 49464700 49464772 -35973708 - MER30 DNA MER1_type -33 197 126 2368 75 0 43 chr17 49464772 49465094 -35973386 + AluSc SINE Alu 1 308 -1 260 183 33 0 chr17 49465588 49465648 -35972832 - MLT1K LTR MaLR 0 588 527 1735 150 92 0 chr17 49465648 49465921 -35972559 + AluJb SINE Alu 1 298 -14 388 134 93 31 chr17 49465921 49466018 -35972462 - MER115 DNA AcHobo -36 657 555 952 62 0 0 chr17 49466118 49466230 -35972250 - AluSq/x SINE Alu -200 112 1 2369 163 21 17 chr17 49467750 49468122 -35970358 - L1MB7 LINE L1 -326 5858 5482 2477 82 0 0 chr17 49468122 49468426 -35970054 - AluY SINE Alu -7 304 1 2369 163 21 17 chr17 49468426 49468533 -35969947 - L1MB7 LINE L1 -702 5482 5377 397 152 30 40 chr17 49468547 49468646 -35969834 - HsTC2 DNA Tc2 -124 1774 1677 189 0 0 0 chr17 49468665 49468686 -35969794 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2059 128 4 0 chr17 49468689 49468963 -35969517 - AluSx SINE Alu -37 275 1 25 31 0 0 chr17 49468965 49468997 -35969483 + AT_rich Low_complexity Low_complexity 1 32 0 728 167 0 8 chr17 49468997 49469117 -35969363 - FLAM_C SINE Alu -20 123 5 2315 101 0 16 chr17 49469133 49469439 -35969041 - AluSq SINE Alu -6 307 7 1146 87 36 31 chr17 49469573 49469769 -35968711 - THE1C LTR MaLR -178 197 1 2642 52 0 0 chr17 49469874 49470179 -35968301 + AluY SINE Alu 1 305 -6 1541 153 32 60 chr17 49470365 49470679 -35967801 - AluJo SINE Alu -7 305 1 235 215 28 4 chr17 49470679 49470771 -35967709 - AluJo SINE Alu -167 135 1 * 1191 105 4 105 chr17 49470771 49470867 -35967613 + LTR23 LTR ERV1 222 281 -156 2102 116 11 11 chr17 49470867 49471196 -35967284 + AluSx SINE Alu 1 329 0 1191 105 4 105 chr17 49471196 49471339 -35967141 + LTR23 LTR ERV1 281 437 0 26 64 0 0 chr17 49471570 49471617 -35966863 + AT_rich Low_complexity Low_complexity 1 47 0 392 195 41 61 chr17 49471864 49472017 -35966463 + L1ME3 LINE L1 5867 6016 -154 231 114 0 0 chr17 49472020 49472055 -35966425 + MER3 DNA MER1_type 15 49 -160 313 250 0 46 chr17 49472055 49472163 -35966317 + L1ME3 LINE L1 6055 6157 -5 705 156 8 39 chr17 49472183 49472311 -35966169 + FLAM_C SINE Alu 1 124 -9 831 189 0 0 chr17 49472426 49472558 -35965922 + FLAM_C SINE Alu 2 133 0 2225 107 7 0 chr17 49472597 49472896 -35965584 - AluSp SINE Alu -12 301 1 2370 86 3 0 chr17 49473283 49473575 -35964905 - AluSp SINE Alu -20 293 1 2167 135 3 3 chr17 49473873 49474185 -35964295 + AluSx SINE Alu 1 312 0 2162 124 20 0 chr17 49475322 49475620 -35962860 - AluSx SINE Alu -4 308 5 28 29 0 0 chr17 49475660 49475695 -35962785 + AT_rich Low_complexity Low_complexity 1 35 0 206 231 15 0 chr17 49475758 49475823 -35962657 + (TA)n Simple_repeat Simple_repeat 1 66 0 2077 157 0 3 chr17 49475972 49476327 -35962153 + AluJb SINE Alu 1 354 0 512 108 0 0 chr17 49477038 49477103 -35961377 + AluS SINE Alu 2 66 -247 2393 95 0 0 chr17 49477240 49477534 -35960946 + AluSc SINE Alu 1 294 -15 235 307 59 10 chr17 49477639 49477740 -35960740 - L1ME LINE L1 -322 5840 5735 2215 103 3 17 chr17 49477828 49478128 -35960352 + AluSx SINE Alu 1 296 -16 572 302 97 16 chr17 49478147 49478518 -35959962 - L1ME LINE L1 -450 5720 5320 6743 49 3 26 chr17 49478547 49479404 -35959076 + SVA Other Other 549 1386 0 2650 4 0 0 chr17 49479557 49479837 -35958643 + AluYa5 SINE Alu 1 280 -31 50 42 0 0 chr17 49479943 49480014 -35958466 + AT_rich Low_complexity Low_complexity 1 71 0 375 276 48 14 chr17 49480260 49480405 -35958075 - L1ME LINE L1 -369 5752 5603 689 0 0 0 chr17 49481155 49481228 -35957252 + tRNA-Gln-CAA tRNA tRNA 1 73 -2 2413 93 0 0 chr17 49481812 49482124 -35956356 + AluSx SINE Alu 1 312 0 212 98 0 24 chr17 49482168 49482209 -35956271 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 317 190 40 0 chr17 49482235 49482335 -35956145 + GA-rich Low_complexity Low_complexity 1 104 0 491 298 0 34 chr17 49482823 49483028 -35955452 + L1M4 LINE L1 4708 4905 -1241 233 172 17 17 chr17 49483051 49483109 -35955371 + CT-rich Low_complexity Low_complexity 1 58 0 1057 167 12 0 chr17 49483109 49483271 -35955209 - FRAM SINE Alu -9 167 4 2015 128 13 3 chr17 49483375 49483679 -35954801 + AluYa5 SINE Alu 5 311 0 2323 105 0 0 chr17 49483741 49484036 -35954444 + AluSc SINE Alu 1 295 -14 1637 204 3 7 chr17 49484370 49484664 -35953816 + AluJb SINE Alu 1 293 -19 1999 87 8 11 chr17 49484667 49484932 -35953548 + AluSx SINE Alu 1 264 -48 680 197 125 33 chr17 49485250 49485402 -35953078 + FRAM SINE Alu 1 166 0 1976 159 3 13 chr17 49485404 49485718 -35952762 + AluJb SINE Alu 1 311 -1 2216 120 0 3 chr17 49485782 49486082 -35952398 - AluSx SINE Alu -13 299 1 754 119 18 0 chr17 49486285 49486394 -35952086 - AluSg/x SINE Alu -17 293 183 481 214 36 65 chr17 49486555 49486652 -35951828 + REP3 LTR ERV 400 491 -71 2318 89 3 0 chr17 49486652 49486943 -35951537 - AluSg SINE Alu -18 292 1 481 214 36 65 chr17 49486943 49487013 -35951467 + REP3 LTR ERV 491 562 0 264 182 182 0 chr17 49487071 49487137 -35951343 + FRAM/FAM SINE Alu 1 77 -89 36 0 0 0 chr17 49487154 49487190 -35951290 + AT_rich Low_complexity Low_complexity 1 36 0 1586 154 24 50 chr17 49487401 49487535 -35950945 + AluJb SINE Alu 1 137 -175 2467 42 0 3 chr17 49487535 49487858 -35950622 + AluY SINE Alu 1 322 0 1586 154 24 50 chr17 49487858 49488061 -35950419 + AluJb SINE Alu 137 312 0 309 44 111 0 chr17 49488446 49488491 -35949989 - MER66B LTR ERV1 -142 344 295 628 284 68 36 chr17 49488533 49488755 -35949725 + HERVL40 LTR ERVL 2109 2337 -3193 258 234 0 0 chr17 49488849 49488913 -35949567 - MLT1D LTR MaLR -2 503 440 1274 195 19 8 chr17 49489620 49489877 -35948603 - MLT1D LTR MaLR -11 494 235 1436 118 9 28 chr17 49489882 49490117 -35948363 - AluSg/x SINE Alu 0 304 74 2048 126 7 23 chr17 49491307 49491616 -35946864 - AluSq SINE Alu -9 304 1 1702 171 13 17 chr17 49491670 49491968 -35946512 - AluJo SINE Alu -15 297 1 1443 64 0 27 chr17 49492398 49492586 -35945894 - AluY SINE Alu -4 307 125 973 193 0 0 chr17 49492716 49492882 -35945598 - FRAM SINE Alu -15 161 1 628 269 168 10 chr17 49493002 49493311 -35945169 + L1ME LINE L1 5342 5699 -465 889 126 0 30 chr17 49493312 49493447 -35945033 + FLAM_C SINE Alu 1 131 -2 364 230 81 0 chr17 49493484 49493558 -35944922 + L3 LINE CR1 1041 1120 -457 427 284 108 6 chr17 49493563 49493739 -35944741 + MIR SINE MIR 67 260 -2 378 243 226 18 chr17 49493736 49493962 -35944518 + L3 LINE CR1 1130 1402 -175 * 1688 208 104 88 chr17 49493974 49494094 -35944386 - LTR8A LTR ERV1 0 727 610 2300 116 0 0 chr17 49494094 49494395 -35944085 - AluSx SINE Alu -11 301 1 1688 208 104 88 chr17 49494395 49494957 -35943523 - LTR8A LTR ERV1 -117 610 34 263 317 41 14 chr17 49494978 49495123 -35943357 + L3 LINE CR1 1420 1568 -9 330 232 8 72 chr17 49495190 49495315 -35943165 + MER112 DNA MER1_type 4 120 -140 229 61 0 0 chr17 49495312 49495345 -35943135 + HY3 scRNA scRNA 69 101 0 * 27 29 0 0 chr17 49495357 49495391 -35943089 + AT_rich Low_complexity Low_complexity 1 34 0 487 145 13 13 chr17 49495396 49495472 -35943008 + AluJ/FLAM SINE Alu 6 81 -231 2115 111 10 16 chr17 49495573 49495879 -35942601 - AluSx SINE Alu -8 304 1 232 173 19 19 chr17 49495881 49495933 -35942547 + L1M4 LINE L1 2677 2728 -3418 507 130 61 52 chr17 49496377 49496492 -35941988 - MLT2B3 LTR ERVL -264 290 175 364 376 30 0 chr17 49496605 49496807 -35941673 - HERVL LTR ERVL -792 4972 4765 1143 261 163 59 chr17 49496848 49497456 -35941024 + MER115 DNA AcHobo 21 691 -2 1278 285 42 24 chr17 49497484 49498021 -35940459 - HERVL LTR ERVL -868 4617 4076 713 322 27 61 chr17 49498017 49498051 -35940429 - HERVL LTR ERVL -1329 4435 4401 * 2102 144 60 8 chr17 49498051 49498404 -35940076 + THE1C LTR MaLR 1 371 -4 713 322 27 61 chr17 49498404 49498770 -35939710 - HERVL LTR ERVL -1363 4401 4049 2656 144 19 9 chr17 49498770 49499194 -35939286 + MSTA LTR MaLR 1 428 0 713 322 27 61 chr17 49499194 49499236 -35939244 - HERVL LTR ERVL -1715 4049 4007 28 50 0 17 chr17 49499258 49499277 -35939203 + AT_rich Low_complexity Low_complexity 1 19 -40 270 0 0 0 chr17 49499277 49499307 -35939173 + (TA)n Simple_repeat Simple_repeat 1 30 0 28 50 0 17 chr17 49499307 49499347 -35939133 + AT_rich Low_complexity Low_complexity 19 59 0 2295 121 3 0 chr17 49499347 49499653 -35938827 + AluSx SINE Alu 1 307 -5 553 246 40 49 chr17 49499654 49499878 -35938602 - HERVL LTR ERVL -1506 3979 3758 723 150 0 6 chr17 49500245 49500493 -35937987 + AluJ SINE Alu 1 295 -17 2451 91 0 0 chr17 49500493 49500802 -35937678 + AluSg1 SINE Alu 1 309 0 1856 109 107 132 chr17 49500963 49501402 -35937078 + MSTA LTR MaLR 1 428 0 858 262 141 37 chr17 49501467 49501822 -35936658 - LTR16C LTR ERVL -10 481 90 1579 180 16 42 chr17 49501981 49502292 -35936188 - AluJb SINE Alu -9 303 1 801 164 23 0 chr17 49503080 49503208 -35935272 + FLAM_C SINE Alu 3 133 0 1042 158 238 0 chr17 49503403 49503605 -35934875 - AluJb SINE Alu -12 300 51 451 83 0 0 chr17 49504138 49504198 -35934282 - MSTA LTR MaLR 0 428 369 598 114 0 0 chr17 49504298 49504377 -35934103 - AluS SINE Alu -233 80 2 2051 133 41 0 chr17 49505105 49505398 -35933082 + AluSx SINE Alu 1 305 -7 2107 133 3 0 chr17 49505403 49505688 -35932792 + AluSx SINE Alu 6 291 -21 262 161 75 0 chr17 49505688 49505781 -35932699 + (TA)n Simple_repeat Simple_repeat 1 100 0 2426 70 3 16 chr17 49505792 49506104 -35932376 - AluY SINE Alu -3 308 1 1201 167 53 4 chr17 49506104 49506349 -35932131 - L1MB3 LINE L1 -32 6151 5895 183 261 34 68 chr17 49506503 49506591 -35931889 - L2 LINE L2 -218 3054 2970 1833 153 6 40 chr17 49507228 49507404 -35931076 - AluJb SINE Alu -2 310 148 2233 107 14 3 chr17 49507404 49507695 -35930785 - AluSx SINE Alu -18 294 1 1833 153 6 40 chr17 49507695 49507839 -35930641 - AluJb SINE Alu -164 148 1 202 183 254 56 chr17 49507897 49507968 -35930512 + L2 LINE L2 3173 3257 -56 838 288 111 57 chr17 49508071 49508502 -35929978 - L2 LINE L2 -706 2608 2135 1688 103 4 17 chr17 49508502 49508735 -35929745 + AluSg/x SINE Alu 72 301 -9 838 288 111 57 chr17 49508735 49508887 -35929593 - L2 LINE L2 -1179 2135 1993 2245 111 0 7 chr17 49509388 49509717 -35928763 - AluSg SINE Alu 0 310 1 2341 108 0 0 chr17 49511070 49511366 -35927114 + AluSx SINE Alu 1 296 -16 425 191 0 0 chr17 49511508 49511576 -35926904 + AluJb SINE Alu 150 217 -95 272 95 0 0 chr17 49511676 49511718 -35926762 + Alu SINE Alu 264 305 -3 339 120 0 0 chr17 49511722 49511772 -35926708 - FLAM SINE Alu -15 118 69 2100 97 0 4 chr17 49512309 49512606 -35925874 + AluSx SINE Alu 16 311 0 254 211 79 0 chr17 49512637 49512713 -35925767 - MLT1H LTR MaLR 0 542 461 687 245 154 22 chr17 49512800 49513118 -35925362 - MLT1H LTR MaLR -189 360 1 2532 93 0 0 chr17 49513371 49513682 -35924798 + AluSp SINE Alu 1 311 -2 398 248 7 72 chr17 49513950 49513985 -35924495 + L2 LINE L2 1895 1931 -1383 3271 151 66 14 chr17 49513985 49514382 -35924098 - LTR26E LTR ERV1 0 622 247 2435 75 7 0 chr17 49514382 49514675 -35923805 - AluSq SINE Alu -18 295 1 1964 120 9 62 chr17 49514680 49515004 -35923476 - AluJb SINE Alu -5 307 1 3271 151 66 14 chr17 49515004 49515191 -35923289 - LTR26E LTR ERV1 -378 244 1 398 248 7 72 chr17 49515191 49515256 -35923224 + L2 LINE L2 1931 1984 -1330 2536 156 42 2 chr17 49515256 49515666 -35922814 + MSTB LTR MaLR 1 426 0 398 248 7 72 chr17 49515666 49515717 -35922763 + L2 LINE L2 1984 2037 -1277 3146 150 57 63 chr17 49515719 49516232 -35922248 - LTR8A LTR ERV1 0 727 218 2462 60 0 17 chr17 49516232 49516534 -35921946 - AluY SINE Alu -14 297 1 3146 150 57 63 chr17 49516534 49516718 -35921762 - LTR8A LTR ERV1 -509 218 34 1859 145 291 24 chr17 49516741 49517232 -35921248 + LTR29 LTR ERV1 1 622 0 2397 181 102 20 chr17 49517245 49517898 -35920582 - LTR28 LTR ERV1 0 636 1 423 293 17 17 chr17 49517919 49518035 -35920445 + L2 LINE L2 3193 3308 -5 240 193 0 57 chr17 49518540 49518628 -35919852 + L1M4 LINE L1 5100 5182 -964 2182 96 101 46 chr17 49518629 49518795 -35919685 + THE1B LTR MaLR 1 156 -208 2179 110 4 0 chr17 49518795 49519107 -35919373 + AluSx SINE Alu 1 313 0 2182 96 101 46 chr17 49519107 49519284 -35919196 + THE1B LTR MaLR 156 364 0 7073 122 22 57 chr17 49519299 49520608 -35917872 - MER52C LTR ERV1 -14 1264 2 11373 82 28 36 chr17 49520608 49521146 -35917334 + THE1B-int LTR MaLR 5 546 -1034 2043 127 0 0 chr17 49521146 49521442 -35917038 + AluSx SINE Alu 16 311 0 11373 82 28 36 chr17 49521442 49522492 -35915988 + THE1B-int LTR MaLR 546 1580 0 2210 111 102 15 chr17 49522493 49522827 -35915653 + THE1B LTR MaLR 2 364 0 2155 135 23 0 chr17 49522852 49523156 -35915324 + AluSx SINE Alu 1 311 -1 882 216 17 6 chr17 49524359 49524535 -35913945 - MER45A DNA AcHobo 0 178 1 185 273 71 114 chr17 49524877 49525174 -35913306 + L2 LINE L2 1935 2218 -1096 830 293 118 9 chr17 49525538 49526117 -35912363 + HERVL LTR ERVL 3835 4557 -1207 1306 131 22 0 chr17 49526125 49526347 -35912133 + L1MD3 LINE L1 7755 7981 -14 264 331 63 14 chr17 49526362 49526504 -35911976 + HERVL LTR ERVL 4545 4693 -1071 2190 132 3 3 chr17 49526721 49527032 -35911448 + AluSp SINE Alu 2 312 -1 545 41 0 14 chr17 49527032 49527105 -35911375 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 230 327 71 49 chr17 49527884 49528110 -35910370 + L2 LINE L2 2439 2669 -645 1916 153 0 4 chr17 49528128 49528409 -35910071 + AluJo SINE Alu 1 280 -32 254 317 102 12 chr17 49528559 49528726 -35909754 + L2 LINE L2 2877 3058 -214 22328 72 55 42 chr17 49528972 49529596 -35908884 - LTR19A-int LTR ERV1 -2278 3308 2693 7779 113 35 39 chr17 49529596 49530928 -35907552 + SVA Other Other 61 1386 0 22328 72 55 42 chr17 49530928 49531050 -35907430 - LTR19A-int LTR ERV1 -2893 2693 2574 1671 129 3 145 chr17 49531050 49531415 -35907065 - AluSp SINE Alu 0 313 1 22328 72 55 42 chr17 49531415 49533935 -35904545 - LTR19A-int LTR ERV1 -3012 2574 1 3023 70 111 7 chr17 49533935 49534375 -35904105 - LTR19A LTR ERV1 0 486 1 1166 254 110 29 chr17 49534682 49534767 -35903713 + LTR47B LTR ERVL 1 78 -365 2213 105 3 7 chr17 49534767 49535061 -35903419 + AluSx SINE Alu 1 293 -19 1166 254 110 29 chr17 49535061 49535385 -35903095 + LTR47B LTR ERVL 78 443 0 219 345 43 9 chr17 49535414 49535530 -35902950 + MIR SINE MIR 23 142 -120 225 0 0 0 chr17 49535874 49535899 -35902581 + (A)n Simple_repeat Simple_repeat 1 25 0 1962 150 0 26 chr17 49535909 49536222 -35902258 - AluSx SINE Alu -7 305 1 1429 168 52 35 chr17 49536263 49536549 -35901931 + AluJo SINE Alu 2 292 -10 2229 112 0 0 chr17 49537018 49537346 -35901134 - AluSq SINE Alu 0 328 1 2228 156 39 16 chr17 49537709 49538092 -35900388 + MSTD LTR MaLR 4 423 -3 346 298 122 38 chr17 49538963 49539095 -35899385 + MIR SINE MIR 5 124 -138 2142 111 3 0 chr17 49539095 49539422 -35899058 + AluSx SINE Alu 1 312 0 346 298 122 38 chr17 49539422 49539527 -35898953 + MIR SINE MIR 124 262 0 265 259 58 22 chr17 49539597 49539736 -35898744 - L1M4 LINE L1 -1901 4245 4102 1691 161 45 0 chr17 49539739 49540025 -35898455 - AluSx SINE Alu -13 299 1 1639 188 18 0 chr17 49540032 49540314 -35898166 - AluJo SINE Alu -24 288 2 41 0 0 0 chr17 49540531 49540572 -35897908 + AT_rich Low_complexity Low_complexity 1 41 0 2441 86 0 0 chr17 49540597 49540898 -35897582 - AluY SINE Alu -9 302 2 316 329 62 33 chr17 49540997 49541225 -35897255 - L1M4 LINE L1 -3582 2564 2327 2436 65 10 0 chr17 49541225 49541516 -35896964 - AluSc SINE Alu -15 294 1 316 329 62 33 chr17 49541516 49541530 -35896950 - L1M4 LINE L1 -3819 2327 2315 180 0 0 0 chr17 49542885 49542905 -35895575 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1741 190 0 13 chr17 49542907 49543223 -35895257 + AluJo SINE Alu 1 312 0 2477 103 0 0 chr17 49543466 49543823 -35894657 + AluSx SINE Alu 1 357 0 1334 198 76 42 chr17 49544123 49544365 -35894115 - MSTD LTR MaLR 0 396 135 2078 138 0 16 chr17 49544365 49544677 -35893803 + AluSx SINE Alu 1 307 -5 1334 198 76 42 chr17 49544677 49544817 -35893663 - MSTD LTR MaLR -261 135 1 340 303 167 0 chr17 49544984 49545116 -35893364 + MIR SINE MIR 12 165 -97 887 84 0 0 chr17 49545121 49545228 -35893252 + AluSq/x SINE Alu 5 111 -201 2921 108 22 22 chr17 49545229 49545673 -35892807 - MLT2A1 LTR ERVL 0 444 1 9576 52 9 0 chr17 49545673 49546806 -35891674 - HERVL-A1 LTR ERVL 0 5654 4512 1047 170 0 0 chr17 49546806 49546971 -35891509 - AluSp SINE Alu -9 304 140 15745 53 11 1 chr17 49547075 49548985 -35889495 + LTR19A-int LTR ERV1 3657 5586 0 3159 62 112 5 chr17 49548985 49549424 -35889056 + LTR19A LTR ERV1 1 486 0 246 247 117 0 chr17 49550047 49550124 -35888356 + L2 LINE L2 3227 3312 -1 1904 143 0 14 chr17 49550478 49550757 -35887723 + AluSx SINE Alu 1 275 -37 468 35 0 0 chr17 49550761 49550819 -35887661 + (CA)n Simple_repeat Simple_repeat 1 58 0 333 263 135 61 chr17 49550850 49551147 -35887333 + L2 LINE L2 2995 3313 0 810 195 2 38 chr17 49551595 49551790 -35886690 + MIR SINE MIR 38 226 -36 2118 134 0 0 chr17 49551894 49552197 -35886283 + AluSx SINE Alu 1 303 0 22 35 0 0 chr17 49552747 49552776 -35885704 + AT_rich Low_complexity Low_complexity 1 29 0 1392 171 0 0 chr17 49552776 49552992 -35885488 + AluJb SINE Alu 86 301 -11 1333 266 95 21 chr17 49553040 49553525 -35884955 - LTR33 LTR ERVL 0 521 1 468 241 110 119 chr17 49553575 49553703 -35884777 - MLT1J2 LTR MaLR -44 406 278 2297 94 0 3 chr17 49553703 49554000 -35884480 + AluSx SINE Alu 1 296 -16 468 241 110 119 chr17 49554000 49554216 -35884264 - MLT1J2 LTR MaLR -172 278 65 947 183 23 17 chr17 49554995 49555170 -35883310 + LTR44 LTR ERV1 265 440 -79 445 185 0 3 chr17 49555356 49555500 -35882980 + AluJo SINE Alu 1 183 -129 289 290 0 0 chr17 49556802 49556871 -35881609 + LTR44-int LTR ERV1 150 218 -4429 860 101 15 58 chr17 49556980 49557062 -35881418 - L1MA4 LINE L1 -81 6219 6135 2247 118 0 3 chr17 49557062 49557359 -35881121 + AluSg SINE Alu 1 296 -14 860 101 15 58 chr17 49557359 49557480 -35881000 - L1MA4 LINE L1 -165 6135 5975 1770 132 0 15 chr17 49557481 49557753 -35880727 + L1MA4 LINE L1 5667 5934 -366 319 282 51 47 chr17 49558060 49558294 -35880186 + MER66-int LTR ERV1 3819 4053 -4373 374 328 65 63 chr17 49558395 49558919 -35879561 + MER66-int LTR ERV1 3381 3905 -2896 1995 122 3 55 chr17 49558961 49559272 -35879208 + AluJb SINE Alu 2 296 -16 1635 91 22 35 chr17 49559291 49559522 -35878958 - MER30 DNA MER1_type 0 230 3 727 333 25 28 chr17 49560050 49560446 -35878034 + MER66-int LTR ERV1 2142 2536 -2111 867 112 0 0 chr17 49560796 49560912 -35877568 + FLAM_C SINE Alu 1 116 -17 359 336 31 35 chr17 49561461 49561535 -35876945 + MER70-int LTR ERVL 4475 4725 -294 483 275 45 28 chr17 49561535 49561713 -35876767 + MER66-int LTR ERV1 6080 6260 -416 502 165 0 0 chr17 49562174 49562282 -35876198 - AluSg/x SINE Alu 0 314 207 2080 191 95 43 chr17 49562311 49562767 -35875713 + LTR44 LTR ERV1 1 486 -33 631 215 8 23 chr17 49562767 49562889 -35875591 + FLAM_A SINE Alu 5 126 -176 369 0 0 0 chr17 49562889 49562930 -35875550 + (TG)n Simple_repeat Simple_repeat 2 42 0 2080 191 95 43 chr17 49562937 49562973 -35875507 + LTR44 LTR ERV1 486 519 0 995 231 29 4 chr17 49563061 49563299 -35875181 + MIR SINE MIR 3 246 -16 205 207 134 61 chr17 49564291 49564373 -35874107 + MIR SINE MIR 41 128 -80 215 276 0 0 chr17 49564484 49564542 -35873938 + L3 LINE CR1 693 750 -827 675 317 54 5 chr17 49564710 49565098 -35873382 + L2 LINE L2 1520 1926 -1388 2203 117 3 0 chr17 49565219 49565517 -35872963 - AluSx SINE Alu -13 299 1 791 272 37 51 chr17 49565543 49565904 -35872576 + MLT1H LTR MaLR 47 376 -33 228 94 31 0 chr17 49565878 49565910 -35872570 + MLT1H LTR MaLR 501 533 -16 * 2033 128 7 10 chr17 49566005 49566311 -35872169 - AluJb SINE Alu -7 305 1 2038 86 64 4 chr17 49566932 49567212 -35871268 + AluSc SINE Alu 1 297 -12 304 152 58 12 chr17 49567226 49567556 -35870924 + (TA)n Simple_repeat Simple_repeat 1 345 0 250 93 74 31 chr17 49567595 49567757 -35870723 + (TA)n Simple_repeat Simple_repeat 2 170 0 225 0 0 0 chr17 49567794 49567819 -35870661 + (CA)n Simple_repeat Simple_repeat 2 26 0 1880 141 3 40 chr17 49568008 49568194 -35870286 - AluJb SINE Alu -19 293 121 219 36 0 0 chr17 49568194 49568222 -35870258 + (TG)n Simple_repeat Simple_repeat 2 29 0 1880 141 3 40 chr17 49568222 49568339 -35870141 - AluJb SINE Alu -191 121 1 895 156 0 0 chr17 49569465 49569593 -35868887 + FLAM_C SINE Alu 6 133 -10 597 261 61 125 chr17 49569687 49569778 -35868702 - MLT1J LTR MaLR -84 427 332 1915 152 7 3 chr17 49569778 49570074 -35868406 - AluJb SINE Alu -15 297 1 597 261 61 125 chr17 49570074 49570226 -35868254 - MLT1J LTR MaLR -179 332 172 2861 3 0 13 chr17 49570226 49570536 -35867944 - AluY SINE Alu -5 306 1 597 261 61 125 chr17 49570536 49570747 -35867733 - MLT1J LTR MaLR -339 172 1 2215 131 3 0 chr17 49570991 49571297 -35867183 + AluSx SINE Alu 3 309 -3 296 230 55 150 chr17 49571400 49571693 -35866787 + L1MEd LINE L1 655 974 -5145 2041 148 3 0 chr17 49571693 49571998 -35866482 + AluSx SINE Alu 3 308 -4 296 230 55 150 chr17 49571998 49572140 -35866340 + L1MEd LINE L1 974 1030 -5089 1804 157 3 28 chr17 49572140 49572459 -35866021 + AluJb SINE Alu 1 311 -1 296 230 55 150 chr17 49572459 49572570 -35865910 + L1MEd LINE L1 1030 1150 -4969 2305 114 0 13 chr17 49572579 49572895 -35865585 + AluSx SINE Alu 1 312 0 2366 110 0 0 chr17 49572900 49573210 -35865270 + AluSg SINE Alu 1 310 0 2514 62 19 10 chr17 49573261 49573568 -35864912 + AluSx SINE Alu 3 312 0 1162 53 0 0 chr17 49573580 49573712 -35864768 + AluY SINE Alu 1 132 -179 1066 162 197 31 chr17 49573916 49574175 -35864305 - AluJb SINE Alu 0 302 1 511 315 66 21 chr17 49574176 49574447 -35864033 + HAL1b LINE L1 377 1743 -764 1911 158 0 14 chr17 49574531 49574823 -35863657 + AluJo SINE Alu 1 288 -24 207 0 0 0 chr17 49574910 49574933 -35863547 + (TA)n Simple_repeat Simple_repeat 2 24 0 2300 183 127 15 chr17 49574950 49575430 -35863050 - MLT2B3 LTR ERVL -20 534 1 266 292 31 0 chr17 49575903 49576033 -35862447 + L1MEd LINE L1 2241 2374 -3755 1227 124 0 0 chr17 49576146 49576315 -35862165 + AluSg/x SINE Alu 135 303 -7 2390 109 0 3 chr17 49576853 49577166 -35861314 + AluSx SINE Alu 1 312 0 2035 133 27 0 chr17 49577879 49578172 -35860308 - AluSx SINE Alu -11 301 1 1841 160 3 16 chr17 49578177 49578483 -35859997 - AluJb SINE Alu -1 311 10 492 218 8 25 chr17 49578627 49578996 -35859484 + CT-rich Low_complexity Low_complexity 1 362 0 202 231 0 26 chr17 49579010 49579088 -35859392 + CT-rich Low_complexity Low_complexity 2 77 0 182 216 0 0 chr17 49579331 49579368 -35859112 + MER5B DNA MER1_type 3 39 -139 * 377 257 44 35 chr17 49579355 49579468 -35859012 - MER5B DNA MER1_type -63 115 2 211 111 22 22 chr17 49579715 49579760 -35858720 + G-rich Low_complexity Low_complexity 5 49 0 1855 151 3 7 chr17 49580068 49580367 -35858113 + AluJb SINE Alu 6 303 -9 440 253 7 148 chr17 49580629 49580839 -35857641 - MLT1J LTR MaLR -205 257 129 1261 161 0 58 chr17 49580839 49580985 -35857495 - L1PB4 LINE L1 -1 6155 6027 2223 116 0 0 chr17 49580985 49581288 -35857192 - AluSx SINE Alu -9 303 1 1261 161 0 58 chr17 49581288 49581383 -35857097 - L1PB4 LINE L1 -129 6027 5928 440 253 7 148 chr17 49581383 49581497 -35856983 - MLT1J LTR MaLR -333 129 1 201 271 34 0 chr17 49582493 49582552 -35855928 + CT-rich Low_complexity Low_complexity 1 61 0 3555 116 10 6 chr17 49584023 49584532 -35853948 - MER9 LTR ERVK 0 511 1 2123 111 8 4 chr17 49584533 49584868 -35853612 - HERVK9 LTR ERVK -1 5915 4922 * 30404 89 7 2 chr17 49584855 49589036 -35849444 - HERVK9 LTR ERVK -282 5634 1486 3563 108 11 22 chr17 49589032 49589580 -35848900 - HERVK9 LTR ERVK -5374 542 1 * 3237 106 55 10 chr17 49589580 49590069 -35848411 - MER9 LTR ERVK 0 511 1 622 215 7 0 chr17 49590232 49590367 -35848113 - MER103 DNA DNA -10 156 21 833 154 0 22 chr17 49590490 49590626 -35847854 + FLAM_C SINE Alu 1 133 0 1325 233 127 33 chr17 49590732 49591093 -35847387 + Zaphod DNA AcHobo 5 399 -3632 1958 130 3 16 chr17 49591093 49591400 -35847080 + AluSx SINE Alu 2 304 -8 826 115 0 83 chr17 49591405 49591561 -35846919 + FLAM_C SINE Alu 1 143 0 234 271 86 0 chr17 49591629 49591699 -35846781 - MER5C DNA MER1_type -248 76 1 643 211 132 42 chr17 49591708 49591898 -35846582 - MER58C DNA MER1_type -1 214 8 577 169 0 7 chr17 49591909 49592045 -35846435 + Zaphod DNA AcHobo 3599 3733 -298 1968 157 0 0 chr17 49592048 49592353 -35846127 - AluSx SINE Alu -7 305 1 1347 119 5 0 chr17 49592407 49592620 -35845860 - AluSp SINE Alu 0 313 105 543 280 41 81 chr17 49594128 49594161 -35844319 + MIR SINE MIR 3 36 -226 1929 125 17 3 chr17 49594161 49594456 -35844024 + AluSq SINE Alu 1 299 -14 2143 133 0 0 chr17 49594458 49594767 -35843713 + AluSq SINE Alu 3 311 -2 543 280 41 81 chr17 49594767 49595001 -35843479 + MIR SINE MIR 37 262 0 226 300 29 0 chr17 49596244 49596314 -35842166 - L3b LINE CR1 -202 1381 1310 567 254 31 28 chr17 49597796 49597948 -35840532 - MIR SINE MIR -36 172 22 1993 98 4 7 chr17 49597948 49598223 -35840257 - AluSp SINE Alu -39 274 1 1802 114 14 44 chr17 49598227 49598524 -35839956 - AluJo SINE Alu -16 296 9 567 254 31 28 chr17 49598524 49598578 -35839902 - MIR SINE MIR -188 20 3 525 301 62 10 chr17 49598858 49599051 -35839429 - MIR SINE MIR -48 214 12 200 338 38 12 chr17 49599278 49599358 -35839122 + MIR SINE MIR 32 113 -95 204 351 21 11 chr17 49600114 49600208 -35838272 + MIR3 SINE MIR 99 193 -15 2309 86 0 3 chr17 49600705 49601008 -35837472 + AluSp SINE Alu 1 302 -11 221 218 0 73 chr17 49601069 49601124 -35837356 + L2 LINE L2 3208 3258 -14 644 269 105 53 chr17 49601160 49601674 -35836806 - L2 LINE L2 -17 3296 2740 2064 136 0 0 chr17 49601773 49602075 -35836405 - AluSx SINE Alu -9 303 2 2261 87 3 26 chr17 49602100 49602412 -35836068 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr17 49603870 49603891 -35834589 + GC_rich Low_complexity Low_complexity 1 21 0 2105 91 0 42 chr17 49604887 49605195 -35833285 - AluSq SINE Alu -18 295 1 397 273 29 83 chr17 49606759 49606841 -35831639 - MIR SINE MIR -6 256 171 2238 56 3 0 chr17 49606841 49607172 -35831308 + AluSp SINE Alu 1 332 0 397 273 29 83 chr17 49607172 49607185 -35831295 - MIR SINE MIR -91 171 159 1888 110 57 0 chr17 49607185 49607467 -35831013 + AluSx SINE Alu 1 298 -14 2474 49 0 3 chr17 49607467 49607772 -35830708 + AluY SINE Alu 1 304 -7 397 273 29 83 chr17 49607772 49607878 -35830602 - MIR SINE MIR -101 161 63 1908 94 4 15 chr17 49607997 49608264 -35830216 - AluSx SINE Alu -15 297 34 186 171 0 0 chr17 49611286 49611327 -35827153 + GA-rich Low_complexity Low_complexity 1 41 0 295 259 52 35 chr17 49613202 49613318 -35825162 - MIR SINE MIR -124 138 21 745 56 19 0 chr17 49614503 49614610 -35823870 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 1505 172 15 18 chr17 49614654 49614787 -35823693 + AluJb SINE Alu 1 133 -179 2555 43 7 0 chr17 49614787 49615089 -35823391 + AluY SINE Alu 1 304 -7 1505 172 15 18 chr17 49615089 49615228 -35823252 + AluJb SINE Alu 133 272 -40 261 0 0 0 chr17 49615242 49615271 -35823209 + (CA)n Simple_repeat Simple_repeat 2 30 0 247 227 102 23 chr17 49616086 49616174 -35822306 - MIR SINE MIR -127 135 41 204 268 0 72 chr17 49617744 49617841 -35820639 - L2 LINE L2 -12 3301 3212 1603 144 0 8 chr17 49617907 49618188 -35820292 + AluJo SINE Alu 34 312 0 355 263 79 53 chr17 49618225 49618377 -35820103 + L2 LINE L2 3111 3266 -6 2166 98 9 25 chr17 49618377 49618693 -35819787 + AluSx SINE Alu 1 311 -1 2007 122 0 26 chr17 49618801 49619113 -35819367 - AluSx SINE Alu -8 304 1 2008 100 55 3 chr17 49619133 49619422 -35819058 - AluSp SINE Alu -7 306 3 267 182 91 15 chr17 49619423 49619489 -35818991 - MIR SINE MIR -62 146 82 2206 105 0 10 chr17 49619731 49620035 -35818445 + AluSg SINE Alu 1 301 -9 2779 161 71 97 chr17 49620305 49621051 -35817429 - LTR8A LTR ERV1 0 727 1 2508 36 0 3 chr17 49621381 49621683 -35816797 - AluY SINE Alu -10 301 1 554 205 0 26 chr17 49621745 49621862 -35816618 + L1PA16 LINE L1 5997 6110 -56 380 154 0 15 chr17 49621862 49621963 -35816517 - AluSc SINE Alu 0 314 215 266 180 0 0 chr17 49621967 49622017 -35816463 + L1PA16 LINE L1 6116 6165 -1 557 250 65 0 chr17 49622364 49622532 -35815948 - MIR SINE MIR -69 193 15 1945 136 13 0 chr17 49622766 49622945 -35815535 - AluSx SINE Alu -6 306 120 405 0 0 0 chr17 49622945 49622990 -35815490 + (TA)n Simple_repeat Simple_repeat 2 46 0 1945 136 13 0 chr17 49622990 49623112 -35815368 - AluSx SINE Alu -192 120 1 2179 110 3 3 chr17 49623810 49624120 -35814360 - AluSq SINE Alu -3 310 1 207 224 164 97 chr17 49624225 49624316 -35814164 - L2 LINE L2 -2 3311 3207 1586 154 50 27 chr17 49624316 49624615 -35813865 - AluJo SINE Alu -6 306 1 207 224 164 97 chr17 49624615 49624657 -35813823 - L2 LINE L2 -106 3207 3169 2324 90 0 0 chr17 49624753 49625053 -35813427 - AluSx SINE Alu -10 302 3 220 296 232 0 chr17 49625367 49625492 -35812988 - L3b LINE CR1 -184 1399 1246 448 305 120 46 chr17 49625566 49625639 -35812841 + L2 LINE L2 2823 2889 -383 2239 106 0 0 chr17 49625639 49625942 -35812538 - AluSx SINE Alu -9 303 1 448 305 120 46 chr17 49625942 49626284 -35812196 + L2 LINE L2 2889 3269 -3 1913 127 0 38 chr17 49626591 49626762 -35811718 - AluSx SINE Alu -8 304 149 387 0 0 0 chr17 49626762 49626805 -35811675 + (TA)n Simple_repeat Simple_repeat 2 44 0 1913 127 0 38 chr17 49626805 49626947 -35811533 - AluSx SINE Alu -163 149 3 341 301 0 10 chr17 49626996 49627099 -35811381 - MIR SINE MIR -108 154 53 252 0 0 0 chr17 49627193 49627221 -35811259 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 231 61 0 0 chr17 49627331 49627364 -35811116 + (TA)n Simple_repeat Simple_repeat 1 33 0 471 83 0 0 chr17 49627364 49627424 -35811056 - AluSq/x SINE Alu -190 123 64 326 282 103 47 chr17 49627443 49627589 -35810891 - L1M2 LINE L1 -4772 1309 1173 1881 109 7 24 chr17 49627589 49627882 -35810598 - AluSg SINE Alu -22 288 1 326 282 103 47 chr17 49627882 49627987 -35810493 - L1M2 LINE L1 -4908 1173 502 297 75 0 0 chr17 49628248 49628288 -35810192 + (CA)n Simple_repeat Simple_repeat 2 41 0 4677 88 0 16 chr17 49628338 49628983 -35809497 - LTR8 LTR ERV1 0 691 57 444 51 5 14 chr17 49628984 49629198 -35809282 + AluSp SINE Alu 1 305 -8 342 206 0 0 chr17 49629198 49629266 -35809214 - LTR8 LTR ERV1 -623 68 1 189 0 0 0 chr17 49629326 49629347 -35809133 + (TA)n Simple_repeat Simple_repeat 2 22 0 1891 126 10 23 chr17 49629347 49629648 -35808832 - AluSx SINE Alu -15 297 1 1776 162 7 7 chr17 49629788 49630090 -35808390 - AluSx SINE Alu -8 304 3 2128 118 3 3 chr17 49630116 49630405 -35808075 - AluSq SINE Alu -24 289 1 194 206 16 79 chr17 49630598 49630618 -35807862 - L2 LINE L2 0 3313 3293 222 0 0 33 chr17 49630626 49630656 -35807824 + (TTTTG)n Simple_repeat Simple_repeat 2 90 0 2338 92 0 7 chr17 49630656 49630940 -35807540 - AluSx SINE Alu -27 285 2 194 206 16 79 chr17 49630940 49630982 -35807498 - L2 LINE L2 -20 3293 3255 819 175 150 139 chr17 49630985 49631502 -35806978 + MLT1F1 LTR MaLR 1 561 -6 738 165 0 95 chr17 49631502 49631660 -35806820 + AluJo SINE Alu 1 143 -169 1973 106 110 0 chr17 49631661 49631943 -35806537 + AluSq SINE Alu 1 313 0 2253 86 34 3 chr17 49632046 49632337 -35806143 + AluSp SINE Alu 1 300 -13 2072 119 10 45 chr17 49632342 49632654 -35805826 + AluSg SINE Alu 1 301 -9 1090 176 4 63 chr17 49632739 49632978 -35805502 - AluJb SINE Alu -3 309 85 740 96 0 0 chr17 49632978 49633072 -35805408 - AluSc SINE Alu -61 248 155 2415 102 3 0 chr17 49633547 49633851 -35804629 + AluSx SINE Alu 1 305 -7 2147 123 27 0 chr17 49633861 49634161 -35804319 + AluSx SINE Alu 1 308 -4 400 295 118 64 chr17 49634245 49634692 -35803788 - L2 LINE L2 -3 3269 2709 2195 120 0 16 chr17 49634695 49635011 -35803469 - AluSx SINE Alu -1 311 1 1432 181 19 8 chr17 49635015 49635274 -35803206 - AluJo SINE Alu -10 302 41 729 278 61 5 chr17 49636242 49636440 -35802040 - MIR SINE MIR -32 230 22 253 278 30 75 chr17 49636463 49636596 -35801884 + MIR SINE MIR 103 229 -33 234 220 40 0 chr17 49636615 49636665 -35801815 + MIR SINE MIR 99 150 -112 1842 128 57 3 chr17 49636666 49636948 -35801532 + AluJo SINE Alu 1 297 -15 369 56 0 0 chr17 49636949 49637003 -35801477 + Alu SINE Alu 249 302 0 2163 109 24 3 chr17 49637069 49637362 -35801118 + AluSx SINE Alu 1 299 -13 2526 51 0 29 chr17 49637682 49637995 -35800485 - AluY SINE Alu -7 304 1 2223 93 0 0 chr17 49638157 49638474 -35800006 - AluSx SINE Alu 0 320 4 1247 252 131 24 chr17 49639075 49639488 -35798992 - L2 LINE L2 -4 3309 2853 2069 120 7 0 chr17 49639569 49639878 -35798602 + AluSq SINE Alu 1 311 0 1876 164 42 3 chr17 49639939 49640226 -35798254 + AluJo SINE Alu 1 298 -14 1822 177 0 3 chr17 49640474 49640774 -35797706 - AluJo SINE Alu -13 299 1 2237 104 16 23 chr17 49640939 49641246 -35797234 - AluSx SINE Alu -7 305 1 225 0 0 0 chr17 49641617 49641642 -35796838 + (TG)n Simple_repeat Simple_repeat 2 26 0 231 170 0 0 chr17 49641685 49641732 -35796748 + (CA)n Simple_repeat Simple_repeat 2 48 0 1844 94 0 0 chr17 49641842 49642077 -35796403 + AluSg SINE Alu 1 235 -75 260 241 141 41 chr17 49642265 49642435 -35796045 + L1MC4a LINE L1 5987 6173 -1635 2445 87 7 0 chr17 49642448 49642758 -35795722 + AluSx SINE Alu 1 312 0 1146 112 37 0 chr17 49642760 49642921 -35795559 + AluSg/x SINE Alu 132 298 -14 2392 83 6 22 chr17 49643000 49643314 -35795166 + AluSq SINE Alu 5 313 0 271 250 77 48 chr17 49643706 49643810 -35794670 + L2 LINE L2 3123 3229 -43 2485 90 0 0 chr17 49644228 49644528 -35793952 - AluSx SINE Alu -12 300 1 1743 150 24 17 chr17 49644528 49644821 -35793659 - AluJb SINE Alu -17 295 1 2092 131 0 13 chr17 49645007 49645312 -35793168 - AluSx SINE Alu -11 301 1 216 230 95 27 chr17 49645332 49645406 -35793074 - L2 LINE L2 -20 3293 3215 318 127 18 0 chr17 49645464 49645519 -35792961 - MIR SINE MIR -70 138 83 1990 145 16 0 chr17 49645549 49645852 -35792628 - AluSx SINE Alu -4 308 1 246 95 0 0 chr17 49645975 49646017 -35792463 + (T)n Simple_repeat Simple_repeat 1 42 0 183 143 0 0 chr17 49646295 49646323 -35792157 + MIR SINE MIR 118 145 -117 21 0 0 0 chr17 49646532 49646553 -35791927 + GC_rich Low_complexity Low_complexity 1 21 0 27 92 0 0 chr17 49646588 49646664 -35791816 + GC_rich Low_complexity Low_complexity 1 76 0 297 246 25 66 chr17 49647055 49647177 -35791303 - MIR3 SINE MIR -1 207 91 240 35 0 0 chr17 49647270 49647299 -35791181 + (TG)n Simple_repeat Simple_repeat 1 29 0 3837 81 9 33 chr17 49647737 49648137 -35790343 - MER41A LTR ERV1 0 554 169 2251 100 21 0 chr17 49648137 49648426 -35790054 - AluSx SINE Alu -17 295 1 3837 81 9 33 chr17 49648426 49648567 -35789913 - MER41A LTR ERV1 -385 169 26 1989 59 0 8 chr17 49648570 49648809 -35789671 - AluY SINE Alu -74 237 1 265 253 115 11 chr17 49648920 49649007 -35789473 + MIR SINE MIR 32 127 -81 2387 111 0 0 chr17 49649226 49649533 -35788947 + AluSx SINE Alu 1 307 -5 2295 92 10 0 chr17 49650388 49650680 -35787800 + AluSp SINE Alu 3 297 -16 2345 113 3 0 chr17 49650682 49650992 -35787488 + AluSq SINE Alu 3 313 0 221 298 113 109 chr17 49651048 49651296 -35787184 - L2 LINE L2 -19 3253 3005 950 83 22 28 chr17 49651400 49651580 -35786900 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 201 143 0 29 chr17 49651581 49651616 -35786864 + (TC)n Simple_repeat Simple_repeat 1 34 0 2308 72 12 38 chr17 49651616 49651935 -35786545 - AluY SINE Alu 0 311 1 2492 97 0 0 chr17 49651936 49652244 -35786236 - AluSq SINE Alu -5 308 1 2165 116 10 23 chr17 49652249 49652552 -35785928 - AluSx SINE Alu -13 299 1 1975 97 24 88 chr17 49653149 49653480 -35785000 + AluSx SINE Alu 1 310 -2 2162 101 4 0 chr17 49653563 49653841 -35784639 + AluSx SINE Alu 1 279 -33 257 288 63 7 chr17 49653902 49654013 -35784467 + MIR SINE MIR 33 149 -59 2207 103 10 0 chr17 49654913 49655203 -35783277 + AluSp SINE Alu 1 293 -20 292 229 0 0 chr17 49655967 49656037 -35782443 - MLT1A1 LTR MaLR 0 365 296 2008 95 3 48 chr17 49656038 49656356 -35782124 + AluSc SINE Alu 1 305 0 2298 104 7 0 chr17 49656387 49656694 -35781786 - AluSg SINE Alu 0 310 2 619 192 49 97 chr17 49656694 49656890 -35781590 - MLT1A1 LTR MaLR -63 365 161 2277 77 0 14 chr17 49656890 49657199 -35781281 - AluY SINE Alu 0 305 1 619 192 49 97 chr17 49657199 49657225 -35781255 - MLT1A1 LTR MaLR -267 161 135 2295 86 16 13 chr17 49657225 49657529 -35780951 + AluY SINE Alu 1 305 -6 619 192 49 97 chr17 49657529 49657540 -35780940 - MLT1A1 LTR MaLR -293 135 125 2129 141 3 0 chr17 49657540 49657838 -35780642 + AluSq SINE Alu 1 299 -14 2202 90 40 0 chr17 49657839 49658138 -35780342 + AluSp SINE Alu 1 311 -2 619 192 49 97 chr17 49658138 49658293 -35780187 - MLT1A1 LTR MaLR -302 126 3 630 192 48 96 chr17 49658311 49658353 -35780127 - MLT2C1 LTR ERVL 0 397 355 270 0 0 0 chr17 49658353 49658383 -35780097 + (TG)n Simple_repeat Simple_repeat 2 31 0 630 192 48 96 chr17 49658383 49658397 -35780083 - MLT2C1 LTR ERVL -42 355 342 2069 98 38 3 chr17 49658397 49658684 -35779796 + AluSg SINE Alu 1 297 -13 630 192 48 96 chr17 49658684 49658834 -35779646 - MLT2C1 LTR ERVL -55 342 200 2136 114 10 0 chr17 49658848 49659138 -35779342 - AluSx SINE Alu -19 293 1 1112 81 0 0 chr17 49659138 49659274 -35779206 - AluSq/x SINE Alu -177 136 1 1097 90 0 0 chr17 49659285 49659429 -35779051 - AluSg/x SINE Alu -13 297 154 1730 50 0 0 chr17 49659435 49659634 -35778846 - AluY SINE Alu -112 199 1 2476 92 0 0 chr17 49659634 49659940 -35778540 - AluSg SINE Alu -3 307 2 721 188 99 17 chr17 49659945 49660126 -35778354 - MLT2C1 LTR ERVL -201 196 1 1762 304 48 42 chr17 49660135 49660588 -35777892 - HERVL LTR ERVL -1258 4396 3934 2063 100 50 7 chr17 49660588 49660868 -35777612 - AluSg SINE Alu -18 292 1 1762 304 48 42 chr17 49660868 49661272 -35777208 - HERVL LTR ERVL -1720 3934 3534 266 329 58 0 chr17 49661345 49661482 -35776998 - HERVL LTR ERVL -2216 3548 3404 1100 91 0 52 chr17 49661494 49661648 -35776832 - AluSq/x SINE Alu -166 146 1 660 268 44 118 chr17 49661648 49661871 -35776609 - HERVL LTR ERVL -2186 2810 2635 2182 88 10 24 chr17 49661871 49662167 -35776313 - AluSc SINE Alu -17 292 1 660 268 44 118 chr17 49662167 49662394 -35776086 - HERVL LTR ERVL -2361 2635 2393 2267 103 0 7 chr17 49662419 49662720 -35775760 + AluSx SINE Alu 1 299 -13 2277 109 0 26 chr17 49662721 49663033 -35775447 + AluSx SINE Alu 1 304 -8 390 330 17 23 chr17 49663066 49663242 -35775238 - HERVL LTR ERVL -3467 1529 1355 1209 159 4 40 chr17 49663384 49663610 -35774870 - AluSc SINE Alu -8 301 84 710 237 78 67 chr17 49663626 49663780 -35774700 - HERVL LTR ERVL -3869 1127 967 2361 70 3 7 chr17 49663780 49664078 -35774402 - AluSp SINE Alu -16 297 1 710 237 78 67 chr17 49664078 49664206 -35774274 - HERVL LTR ERVL -4029 967 842 2008 241 118 26 chr17 49664223 49664920 -35773560 - LTR41 LTR ERVL -12 761 1 771 289 75 48 chr17 49664920 49665256 -35773224 - HERVL LTR ERVL -4154 842 489 2578 71 0 3 chr17 49665256 49665566 -35772914 - AluSc SINE Alu 0 309 1 771 289 75 48 chr17 49665566 49665685 -35772795 - HERVL LTR ERVL -4507 489 375 626 161 36 0 chr17 49665685 49665797 -35772683 - MLT1E LTR MaLR 0 593 478 2190 121 14 0 chr17 49665803 49666100 -35772380 - AluSx SINE Alu -11 301 1 309 222 0 0 chr17 49666132 49666195 -35772285 - MLT1E1 LTR MaLR -503 151 89 1677 185 3 25 chr17 49666239 49666558 -35771922 - AluJo SINE Alu 0 312 1 431 191 38 179 chr17 49666594 49666856 -35771624 - MLT1E3-int LTR MaLR 0 1371 1147 527 149 9 37 chr17 49666870 49667022 -35771458 + FLAM_C SINE Alu 40 188 0 955 91 0 38 chr17 49667032 49667164 -35771316 + AluJo SINE Alu 1 127 -175 814 130 0 0 chr17 49667164 49667279 -35771201 + AluJo SINE Alu 186 300 -12 895 235 55 124 chr17 49667301 49667533 -35770947 - MLT1E3-int LTR MaLR -230 1141 894 2030 142 10 13 chr17 49667533 49667844 -35770636 - AluSq SINE Alu -3 310 1 895 235 55 124 chr17 49667844 49667901 -35770579 - MLT1E3-int LTR MaLR -477 894 835 2427 72 36 10 chr17 49667901 49668070 -35770410 - AluSp SINE Alu 0 313 131 2409 97 7 0 chr17 49668070 49668370 -35770110 - AluSg SINE Alu -8 302 1 2427 72 36 10 chr17 49668370 49668505 -35769975 - AluSp SINE Alu -182 131 1 895 235 55 124 chr17 49668505 49668690 -35769790 - MLT1E3-int LTR MaLR -536 835 699 2556 139 23 60 chr17 49668764 49669169 -35769311 + MLT1C LTR MaLR 4 390 -77 2209 126 3 7 chr17 49669169 49669478 -35769002 - AluSx SINE Alu -4 308 1 2556 139 23 60 chr17 49669478 49669554 -35768926 + MLT1C LTR MaLR 390 467 0 1842 208 57 70 chr17 49669675 49669728 -35768752 - MLT1E3-int LTR MaLR -768 603 551 1979 162 0 16 chr17 49669728 49670031 -35768449 - AluJb SINE Alu -10 302 5 1842 208 57 70 chr17 49670031 49670058 -35768422 - MLT1E3-int LTR MaLR -820 551 525 195 100 0 0 chr17 49670058 49670088 -35768392 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2099 127 0 3 chr17 49670090 49670373 -35768107 - AluSx SINE Alu -30 282 1 1842 208 57 70 chr17 49670373 49670740 -35767740 - MLT1E3-int LTR MaLR -847 524 160 2234 96 38 0 chr17 49670740 49671031 -35767449 - AluSx SINE Alu -10 302 1 1842 208 57 70 chr17 49671031 49671189 -35767291 - MLT1E3-int LTR MaLR -1211 160 1 324 143 18 0 chr17 49671193 49671249 -35767231 - MLT1E3 LTR MaLR -4 620 564 767 172 16 0 chr17 49671426 49671548 -35766932 + FLAM_C SINE Alu 3 126 -7 294 245 29 39 chr17 49671568 49671670 -35766810 - HERV16 LTR ERVL -4805 191 91 25 0 0 0 chr17 49671697 49671722 -35766758 + AT_rich Low_complexity Low_complexity 1 25 0 1616 80 35 0 chr17 49671728 49671928 -35766552 - AluSx SINE Alu -105 207 1 695 256 111 60 chr17 49672038 49672354 -35766126 - LTR16A LTR ERVL -104 346 15 1142 225 134 52 chr17 49672411 49672851 -35765629 - MLT1F1 LTR MaLR 0 567 92 1987 86 3 73 chr17 49672852 49673174 -35765306 + AluSx SINE Alu 1 301 0 1137 32 0 0 chr17 49673193 49673318 -35765162 + AluSp/q SINE Alu 173 297 -16 284 100 160 0 chr17 49673318 49673368 -35765112 - Tigger4(Zombi) DNA MER2_type -2673 58 1 528 204 146 101 chr17 49673463 49673593 -35764887 - MLT1H1 LTR MaLR -2 553 430 1864 132 70 0 chr17 49673593 49673866 -35764614 - AluSx SINE Alu -20 292 1 528 204 146 101 chr17 49673866 49674053 -35764427 - MLT1H1 LTR MaLR -125 430 216 339 172 107 95 chr17 49674037 49674056 -35764424 - MER112 DNA MER1_type -84 176 159 * 2467 81 7 3 chr17 49674056 49674363 -35764117 + AluSc SINE Alu 1 308 -1 339 172 107 95 chr17 49674363 49674512 -35763968 - MER112 DNA MER1_type -101 159 6 658 235 77 35 chr17 49674843 49675013 -35763467 + L2 LINE L2 3137 3313 0 270 0 0 0 chr17 49679934 49679964 -35758516 + (A)n Simple_repeat Simple_repeat 1 30 0 857 59 0 0 chr17 49681382 49681484 -35756996 - AluY SINE Alu -10 301 200 33 0 0 0 chr17 49681681 49681714 -35756766 + AT_rich Low_complexity Low_complexity 1 33 0 2403 92 0 0 chr17 49681940 49682244 -35756236 + AluSg SINE Alu 5 308 -2 32 0 0 0 chr17 49682754 49682786 -35755694 + AT_rich Low_complexity Low_complexity 1 32 0 1130 170 18 0 chr17 49682864 49683029 -35755451 + FAM SINE Alu 2 169 -6 249 274 28 9 chr17 49684790 49684896 -35753584 + G-rich Low_complexity Low_complexity 1 108 0 979 107 0 15 chr17 49685263 49685394 -35753086 - FLAM_C SINE Alu -4 129 1 2202 124 0 3 chr17 49685653 49685959 -35752521 - AluSx SINE Alu -7 305 1 1632 159 0 35 chr17 49685963 49686252 -35752228 - AluJo SINE Alu -21 291 13 246 261 185 0 chr17 49686471 49686536 -35751944 - MER20B DNA MER1_type -608 175 99 639 260 132 5 chr17 49687048 49687252 -35751228 - MIR SINE MIR -16 246 17 2222 102 0 14 chr17 49687581 49687876 -35750604 - AluSx SINE Alu -21 291 1 804 168 0 0 chr17 49688023 49688160 -35750320 + FLAM_C SINE Alu 1 137 -6 1695 181 0 7 chr17 49688248 49688536 -35749944 + AluJb SINE Alu 1 286 -26 2228 108 0 7 chr17 49688571 49688866 -35749614 - AluSc SINE Alu -16 293 1 2316 111 0 0 chr17 49688958 49689265 -35749215 + AluSx SINE Alu 1 307 -5 373 186 96 77 chr17 49689295 49689322 -35749158 + HAL1b LINE L1 1193 1218 -4903 837 136 8 23 chr17 49689322 49689454 -35749026 + FLAM_C SINE Alu 1 130 -3 373 186 96 77 chr17 49689454 49689526 -35748954 + HAL1b LINE L1 1218 1287 -4834 2115 137 3 0 chr17 49689526 49689818 -35748662 - AluSx SINE Alu -19 293 1 373 186 96 77 chr17 49689818 49689861 -35748619 + HAL1b LINE L1 1287 6110 -11 2267 98 0 38 chr17 49690163 49690478 -35748002 - AluY SINE Alu -8 303 1 279 188 50 38 chr17 49691094 49691174 -35747306 + LTR66 LTR ERVL 359 439 -171 195 129 0 0 chr17 49691174 49691205 -35747275 + (CA)n Simple_repeat Simple_repeat 2 32 0 292 282 157 55 chr17 49691207 49691462 -35747018 + L2 LINE L2 2233 2513 -801 857 129 0 0 chr17 49691626 49691750 -35746730 + AluSg/x SINE Alu 181 304 -5 261 153 68 51 chr17 49691864 49691923 -35746557 + MIR SINE MIR 202 261 -1 328 308 58 10 chr17 49691951 49692055 -35746425 + L2 LINE L2 3148 3256 -16 272 297 144 18 chr17 49692319 49692430 -35746050 - MIR SINE MIR -101 161 37 535 247 104 98 chr17 49692513 49692738 -35745742 + L1ME4a LINE L1 5296 5518 -603 818 142 63 16 chr17 49692738 49692865 -35745615 - FLAM_C SINE Alu 0 133 1 535 247 104 98 chr17 49692865 49693042 -35745438 + L1ME4a LINE L1 5518 5702 -419 2099 118 3 3 chr17 49693042 49693331 -35745149 - AluSx SINE Alu -23 289 1 535 247 104 98 chr17 49693331 49693407 -35745073 + L1ME4a LINE L1 5702 5776 -345 2250 96 13 16 chr17 49693426 49693738 -35744742 + AluSx SINE Alu 1 311 -1 2036 122 0 38 chr17 49693738 49694057 -35744423 + AluSg SINE Alu 1 307 -3 244 220 200 10 chr17 49694353 49694453 -35744027 + L1ME4a LINE L1 5984 6102 -19 1884 154 20 3 chr17 49694454 49694753 -35743727 - AluJb SINE Alu -6 306 3 2201 135 0 0 chr17 49694798 49695095 -35743385 + AluSx SINE Alu 1 297 -15 1892 136 3 58 chr17 49695488 49695818 -35742662 + AluSx SINE Alu 1 312 0 2532 54 0 0 chr17 49696237 49696531 -35741949 - AluY SINE Alu -17 294 1 2048 138 0 3 chr17 49696898 49697202 -35741278 + AluJb SINE Alu 1 303 -9 2382 105 0 0 chr17 49698438 49698744 -35739736 - AluSx SINE Alu -6 306 1 2174 104 0 10 chr17 49699437 49699735 -35738745 - AluSg SINE Alu -15 295 1 2538 67 3 3 chr17 49699969 49700307 -35738173 + AluSp SINE Alu 1 338 0 2302 101 0 0 chr17 49700450 49700738 -35737742 - AluSg SINE Alu -22 288 1 771 197 102 0 chr17 49701152 49701299 -35737181 - FRAM SINE Alu -4 162 1 2418 86 3 0 chr17 49701317 49701619 -35736861 - AluSp SINE Alu -10 303 1 25 0 0 28 chr17 49704348 49704371 -35734109 + AT_rich Low_complexity Low_complexity 1 24 -11 2113 113 3 0 chr17 49704371 49704654 -35733826 - AluSg SINE Alu -26 284 1 25 0 0 28 chr17 49704654 49704666 -35733814 + AT_rich Low_complexity Low_complexity 24 35 0 358 368 97 0 chr17 49704749 49704863 -35733617 + L2 LINE L2 3143 3267 -5 187 298 0 21 chr17 49705505 49705552 -35732928 - L2 LINE L2 -12 3260 3215 1211 152 13 67 chr17 49705606 49705631 -35732849 - AluJo SINE Alu -17 295 270 2314 100 0 13 chr17 49705631 49705940 -35732540 + AluSc SINE Alu 1 305 -4 1211 152 13 67 chr17 49705940 49706138 -35732342 - AluJo SINE Alu -42 270 84 338 233 227 38 chr17 49706147 49706464 -35732016 - HAL1 LINE L1 0 2507 2131 319 289 52 0 chr17 49706515 49706612 -35731868 - HAL1 LINE L1 -2372 135 34 380 326 8 23 chr17 49706640 49706793 -35731687 - MIR SINE MIR -48 160 10 341 183 17 0 chr17 49707076 49707136 -35731344 + MLT1I LTR MaLR 5 65 -344 994 131 20 0 chr17 49707139 49707292 -35731188 - AluSg/x SINE Alu -20 290 135 417 269 102 24 chr17 49707331 49707498 -35730982 + MLT1I LTR MaLR 83 262 -147 341 146 0 0 chr17 49707541 49707609 -35730871 - Alu SINE Alu 0 301 234 533 234 159 45 chr17 49757970 49758171 -35680309 - MIR SINE MIR -8 254 31 37 0 0 0 chr17 49758827 49758864 -35679616 + AT_rich Low_complexity Low_complexity 1 37 0 1107 138 0 0 chr17 49759003 49759193 -35679287 + AluSg/x SINE Alu 124 313 0 1629 123 70 4 chr17 49759193 49759437 -35679043 + AluSq SINE Alu 1 260 -53 21 0 0 0 chr17 49759448 49759469 -35679011 + AT_rich Low_complexity Low_complexity 1 21 0 480 202 0 11 chr17 49759847 49759936 -35678544 - FLAM_C SINE Alu -19 124 37 2505 67 0 0 chr17 49760080 49760380 -35678100 + AluY SINE Alu 1 300 -11 349 274 75 9 chr17 49760522 49760628 -35677852 - L2 LINE L2 -8 3305 3193 2059 143 0 0 chr17 49760793 49761087 -35677393 + AluSq SINE Alu 5 298 -15 1359 156 184 106 chr17 49761388 49761803 -35676677 + L1MC5 LINE L1 6695 7163 -798 1899 149 0 0 chr17 49761803 49762084 -35676396 + AluJb SINE Alu 1 281 -31 1359 156 184 106 chr17 49762084 49762213 -35676267 + L1MC5 LINE L1 7163 7281 -680 311 106 21 0 chr17 49762315 49762362 -35676118 - Alu SINE Alu -255 48 1 797 227 82 48 chr17 49762362 49762527 -35675953 + L1MC5 LINE L1 7310 7468 -493 1376 171 74 19 chr17 49762527 49762860 -35675620 + AluJb SINE Alu 1 348 0 797 227 82 48 chr17 49762860 49763023 -35675457 + L1MC5 LINE L1 7468 7650 -311 323 219 16 0 chr17 49763096 49763160 -35675320 - AluJ/FLAM SINE Alu -237 65 1 1684 147 111 0 chr17 49763464 49763743 -35674737 + AluSx SINE Alu 1 310 -2 796 209 57 24 chr17 49764351 49764562 -35673918 + L1MD3 LINE L1 7765 7982 -13 2134 86 4 0 chr17 49764574 49764841 -35673639 + AluSx SINE Alu 1 268 -44 2350 100 0 0 chr17 49764979 49765279 -35673201 - AluSq SINE Alu -13 300 1 1769 156 13 36 chr17 49765504 49765812 -35672668 - AluJb SINE Alu -11 301 1 1857 152 26 26 chr17 49765939 49766249 -35672231 - AluSx SINE Alu -2 310 1 1295 179 77 15 chr17 49766271 49766544 -35671936 - AluJb SINE Alu -17 295 6 2212 118 20 0 chr17 49766603 49766909 -35671571 - AluSx SINE Alu 0 312 1 914 154 0 0 chr17 49766914 49767050 -35671430 - AluSq/x SINE Alu -177 136 1 33 25 0 0 chr17 49769932 49769972 -35668508 + GC_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr17 49769984 49770006 -35668474 + GC_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr17 49770039 49770081 -35668399 + GC_rich Low_complexity Low_complexity 1 42 0 868 138 0 0 chr17 49770402 49770518 -35667962 + AluSg/x SINE Alu 166 281 -31 229 65 0 0 chr17 49770526 49770572 -35667908 - LTR66 LTR ERVL -171 439 394 297 0 0 0 chr17 49770572 49770605 -35667875 + (CA)n Simple_repeat Simple_repeat 2 34 0 33 0 0 0 chr17 49770605 49770638 -35667842 + AT_rich Low_complexity Low_complexity 1 33 0 1827 134 7 43 chr17 49771261 49771566 -35666914 + AluJo SINE Alu 12 305 -7 443 301 26 13 chr17 49771852 49772008 -35666472 - MIR3 SINE MIR -9 199 42 1985 254 114 13 chr17 49772037 49772587 -35665893 + L1ME1 LINE L1 5472 6092 -74 180 0 0 0 chr17 49772587 49772607 -35665873 + (TGG)n Simple_repeat Simple_repeat 3 22 0 1985 254 114 13 chr17 49772607 49772671 -35665809 + L1ME1 LINE L1 6092 6148 -18 1468 188 46 7 chr17 49772735 49773017 -35665463 - AluJb SINE Alu -17 295 3 590 141 59 0 chr17 49773032 49773117 -35665363 - AluSg/x SINE Alu -18 291 202 467 171 77 77 chr17 49773188 49773358 -35665122 - MER112 DNA MER1_type -90 170 1 814 171 0 7 chr17 49774030 49774170 -35664310 + AluSg/x SINE Alu 153 291 -21 2238 101 0 13 chr17 49774408 49774714 -35663766 + AluSg SINE Alu 1 302 -8 21 0 0 0 chr17 49775256 49775277 -35663203 + AT_rich Low_complexity Low_complexity 1 21 0 2295 108 0 7 chr17 49775279 49775575 -35662905 + AluSg SINE Alu 1 294 -16 4362 151 37 50 chr17 49775745 49775797 -35662683 + L1MB7 LINE L1 5313 5364 -820 2379 88 0 35 chr17 49775797 49776116 -35662364 + AluY SINE Alu 1 308 -3 4362 151 37 50 chr17 49776116 49776568 -35661912 + L1MB7 LINE L1 5364 5821 -363 1887 172 0 10 chr17 49776568 49776865 -35661615 + AluJb SINE Alu 1 294 -18 1917 165 0 0 chr17 49776866 49777163 -35661317 + AluSx SINE Alu 1 297 -15 4362 151 37 50 chr17 49777163 49777509 -35660971 + L1MB7 LINE L1 5820 6167 -17 296 282 111 43 chr17 49777646 49777763 -35660717 + MIR SINE MIR 27 151 -57 2239 118 0 0 chr17 49778395 49778692 -35659788 - AluSg SINE Alu -13 297 1 2062 120 17 20 chr17 49778693 49778994 -35659486 - AluSx SINE Alu -12 300 1 1798 163 27 10 chr17 49778994 49779289 -35659191 - AluSg SINE Alu -10 300 1 198 0 0 0 chr17 49779312 49779334 -35659146 + (T)n Simple_repeat Simple_repeat 1 22 0 1706 190 10 13 chr17 49779427 49779737 -35658743 + AluJo SINE Alu 4 312 0 1658 149 35 28 chr17 49780363 49780651 -35657829 - AluJb SINE Alu -18 294 5 858 264 70 18 chr17 49780697 49780970 -35657510 + MLT1L LTR MaLR 321 607 -8 509 314 135 3 chr17 49780981 49781306 -35657174 - L2 LINE L2 -972 2342 1975 214 184 355 0 chr17 49781394 49781470 -35657010 + MIR SINE MIR 7 109 -153 881 70 0 9 chr17 49781567 49781681 -35656799 - AluSg SINE Alu -8 304 192 189 0 0 0 chr17 49781681 49781702 -35656778 + (T)n Simple_repeat Simple_repeat 1 21 0 1437 115 0 0 chr17 49782201 49782393 -35656087 - AluSg SINE Alu -110 200 9 13513 113 74 17 chr17 49783034 49783196 -35655284 - Tigger1 DNA MER2_type 0 2418 2267 2230 81 0 0 chr17 49783196 49783469 -35655011 + AluY SINE Alu 27 299 -12 13513 113 74 17 chr17 49783469 49784954 -35653526 - Tigger1 DNA MER2_type -151 2267 867 2299 109 7 0 chr17 49784954 49785256 -35653224 - AluSx SINE Alu -8 304 1 13513 113 74 17 chr17 49785256 49785301 -35653179 - Tigger1 DNA MER2_type -1551 867 826 2495 92 0 0 chr17 49785301 49785607 -35652873 - AluSq SINE Alu -7 306 1 13513 113 74 17 chr17 49785607 49786179 -35652301 - Tigger1 DNA MER2_type -1592 826 24 902 180 6 30 chr17 49786187 49786354 -35652126 + AluSg/x SINE Alu 84 246 -64 217 212 0 30 chr17 49786357 49786407 -35652073 + T-rich Low_complexity Low_complexity 5 54 -14 310 213 16 0 chr17 49786407 49786468 -35652012 - U7 snRNA snRNA -1 62 1 217 212 0 30 chr17 49786468 49786483 -35651997 + T-rich Low_complexity Low_complexity 54 68 0 923 110 47 0 chr17 49786697 49786824 -35651656 + FLAM_C SINE Alu 1 133 0 2271 101 3 0 chr17 49787729 49788026 -35650454 - AluSg SINE Alu -12 298 1 219 213 64 0 chr17 49788056 49788103 -35650377 - L2 LINE L2 -15 3298 3249 630 185 0 9 chr17 49788165 49788273 -35650207 + FLAM_C SINE Alu 3 109 -34 229 222 0 0 chr17 49788379 49788424 -35650056 + Alu SINE Alu 75 119 -183 456 35 0 0 chr17 49788430 49788488 -35649992 + (TA)n Simple_repeat Simple_repeat 2 59 0 903 146 0 0 chr17 49788492 49788622 -35649858 - AluSq/x SINE Alu -180 133 4 707 237 114 22 chr17 49788644 49788872 -35649608 + MIR SINE MIR 1 249 -13 2549 148 31 14 chr17 49789115 49789534 -35648946 + MSTB LTR MaLR 1 426 0 1791 196 3 0 chr17 49792164 49792475 -35646005 - AluJb SINE Alu 0 312 1 2174 115 7 110 chr17 49792519 49792680 -35645800 + MSTD LTR MaLR 1 177 -219 2261 109 3 7 chr17 49792680 49792982 -35645498 + AluSx SINE Alu 1 301 -11 2174 115 7 110 chr17 49792982 49793255 -35645225 + MSTD LTR MaLR 177 390 -6 2487 91 0 3 chr17 49793873 49794182 -35644298 - AluSx SINE Alu -2 310 3 402 304 61 33 chr17 49794184 49794365 -35644115 - MIR SINE MIR -57 205 20 204 241 19 0 chr17 49794472 49794526 -35643954 + CT-rich Low_complexity Low_complexity 1 55 0 1900 165 0 19 chr17 49794906 49795246 -35643234 - AluJo SINE Alu 0 312 1 2284 82 4 0 chr17 49795252 49795569 -35642911 - AluSp SINE Alu 0 318 1 21 36 0 0 chr17 49795578 49795606 -35642874 + AT_rich Low_complexity Low_complexity 1 28 0 2158 117 17 7 chr17 49795956 49796255 -35642225 + AluSx SINE Alu 1 302 -10 2229 122 0 0 chr17 49796677 49796959 -35641521 + AluSx SINE Alu 1 285 -27 519 60 0 0 chr17 49796959 49797026 -35641454 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 2229 122 0 0 chr17 49797026 49797039 -35641441 + AluSx SINE Alu 284 296 -16 1263 101 22 17 chr17 49797041 49797268 -35641212 + AluSq SINE Alu 106 333 0 2147 123 7 0 chr17 49797558 49797866 -35640614 + AluY SINE Alu 1 310 -1 1818 144 14 7 chr17 49798029 49798307 -35640173 - AluJo SINE Alu -4 308 29 1241 156 199 19 chr17 49798327 49798583 -35639897 - AluJb SINE Alu 0 302 1 191 61 30 0 chr17 49798594 49798627 -35639853 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2007 130 0 77 chr17 49799142 49799480 -35639000 + AluSq SINE Alu 2 313 0 2235 124 7 3 chr17 49801040 49801347 -35637133 + AluSx SINE Alu 1 308 -4 1668 149 3 110 chr17 49801823 49802025 -35636455 - AluJb SINE Alu -1 301 148 1660 125 4 17 chr17 49802025 49802265 -35636215 - AluSx SINE Alu -15 297 61 1668 149 3 110 chr17 49802265 49802397 -35636083 - AluJb SINE Alu -154 148 3 180 0 0 0 chr17 49802413 49802433 -35636047 + (CAA)n Simple_repeat Simple_repeat 2 21 0 225 254 0 30 chr17 49802850 49802917 -35635563 - MER46A DNA MER2_type -73 163 99 * 442 79 16 0 chr17 49802889 49802952 -35635528 + MER46A DNA MER2_type 172 235 -1 427 165 19 58 chr17 49802952 49803022 -35635458 + MER53 DNA DNA 123 188 -1 2153 189 66 0 chr17 49803026 49803203 -35635277 + MSTB LTR MaLR 1 165 -261 195 42 0 0 chr17 49803203 49803227 -35635253 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 2153 189 66 0 chr17 49803227 49803445 -35635035 + MSTB LTR MaLR 165 422 -4 1814 153 0 85 chr17 49803446 49803787 -35634693 + AluJb SINE Alu 1 312 0 2222 110 13 7 chr17 49803798 49804108 -35634372 + AluSx SINE Alu 1 312 0 1628 165 14 35 chr17 49804544 49804829 -35633651 + AluJo SINE Alu 3 281 -31 2085 112 28 0 chr17 49804829 49805114 -35633366 - AluSq SINE Alu -5 308 15 1547 169 75 5 chr17 49805115 49805514 -35632966 + MLT1D LTR MaLR 12 464 -3 615 300 47 53 chr17 49805659 49805999 -35632481 + L2 LINE L2 2898 3235 -37 1863 127 82 0 chr17 49806227 49806495 -35631985 - AluSx SINE Alu -22 290 1 394 100 14 14 chr17 49806509 49806579 -35631901 + (TTCCC)n Simple_repeat Simple_repeat 1 70 0 717 168 67 0 chr17 49806579 49806698 -35631782 - FLAM_C SINE Alu -6 127 1 374 250 0 0 chr17 49806778 49806850 -35631630 + L2 LINE L2 3160 3231 -41 1801 144 0 56 chr17 49806907 49807212 -35631268 - AluJb SINE Alu -22 290 3 186 224 0 0 chr17 49807960 49808009 -35630471 + GA-rich Low_complexity Low_complexity 4 52 0 2271 115 0 0 chr17 49808073 49808377 -35630103 + AluSx SINE Alu 1 304 -8 275 318 27 0 chr17 49808797 49808907 -35629573 + L3b LINE CR1 1296 1408 -175 2048 122 0 14 chr17 49809448 49809760 -35628720 - AluSx SINE Alu 0 308 1 535 255 89 38 chr17 49809764 49809921 -35628559 + L2 LINE L2 3107 3271 -1 1828 170 3 26 chr17 49810316 49810628 -35627852 + AluJb SINE Alu 3 307 -5 239 327 100 9 chr17 49810819 49810929 -35627551 + L2 LINE L2 3134 3253 -19 267 340 122 45 chr17 49812597 49812974 -35625506 + L2 LINE L2 2848 3253 -19 23 0 0 0 chr17 49813042 49813065 -35625415 + AT_rich Low_complexity Low_complexity 1 23 0 1894 158 11 0 chr17 49813065 49813344 -35625136 + AluJb SINE Alu 1 282 -30 29 0 0 0 chr17 49813652 49813681 -35624799 + AT_rich Low_complexity Low_complexity 1 29 0 229 200 0 0 chr17 49814198 49814248 -35624232 - Charlie7 DNA MER1_type -48 2564 2515 1239 242 84 24 chr17 49814253 49814349 -35624131 - Charlie7 DNA MER1_type -1923 689 600 1306 174 18 22 chr17 49814349 49814625 -35623855 + L1MA5 LINE L1 6026 6300 0 1239 242 84 24 chr17 49814625 49814982 -35623498 - Charlie7 DNA MER1_type -2012 600 209 1827 137 4 0 chr17 49815171 49815433 -35623047 + AluJb SINE Alu 1 263 -49 2259 115 0 0 chr17 49815679 49815974 -35622506 - AluSx SINE Alu -17 295 1 738 281 44 0 chr17 49816558 49816786 -35621694 - MIR SINE MIR -21 241 4 793 144 15 8 chr17 49817648 49817780 -35620700 + FLAM_C SINE Alu 1 133 0 418 157 14 0 chr17 49817790 49817860 -35620620 + AluJ/FRAM SINE Alu 231 301 -11 2441 103 3 0 chr17 49818351 49818661 -35619819 + AluSx SINE Alu 1 311 -1 286 291 43 35 chr17 49820011 49820152 -35618328 + L1MC4a LINE L1 5785 5926 -1882 1535 138 0 4 chr17 49820413 49820644 -35617836 - AluJo SINE Alu -1 311 82 2270 110 0 17 chr17 49820649 49820812 -35617668 - AluSx SINE Alu -16 296 139 2277 107 0 7 chr17 49820812 49821120 -35617360 - AluSc SINE Alu -3 306 1 2270 110 0 17 chr17 49821120 49821257 -35617223 - AluSx SINE Alu -173 139 1 2095 147 0 3 chr17 49821269 49821575 -35616905 - AluSx SINE Alu -6 306 2 303 140 0 0 chr17 49821587 49821637 -35616843 + (T)n Simple_repeat Simple_repeat 1 50 0 799 61 9 0 chr17 49821637 49821752 -35616728 - LTR9B LTR ERV1 -87 557 442 297 51 0 0 chr17 49821761 49821800 -35616680 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 400 62 0 0 chr17 49821804 49821852 -35616628 - Alu SINE Alu -262 49 2 2340 72 28 3 chr17 49821865 49822156 -35616324 - AluSq SINE Alu -15 298 1 2587 162 16 16 chr17 49822369 49822819 -35615661 + MER66A LTR ERV1 1 450 -28 297 250 38 38 chr17 49823077 49823157 -35615323 + L2 LINE L2 3234 3313 0 2384 78 17 0 chr17 49823350 49823645 -35614835 - AluSx SINE Alu -12 300 1 926 123 0 29 chr17 49824172 49824310 -35614170 - AluSq/x SINE Alu -178 134 1 2321 108 10 0 chr17 49824329 49824636 -35613844 - AluSx SINE Alu -1 311 2 417 297 30 30 chr17 49824712 49824877 -35613603 - MIR SINE MIR -50 212 48 1783 163 11 0 chr17 49824877 49825189 -35613291 - AluJb SINE Alu 0 315 1 1555 193 40 30 chr17 49825189 49825489 -35612991 - AluJo SINE Alu -8 304 1 2395 93 0 3 chr17 49825636 49825936 -35612544 - AluSq SINE Alu -14 299 1 313 349 114 12 chr17 49826110 49826276 -35612204 + MIR3 SINE MIR 4 186 -22 1830 125 66 35 chr17 49827020 49827308 -35611172 - AluSx SINE Alu -15 297 1 819 183 88 95 chr17 49827308 49827503 -35610977 - MER58B DNA MER1_type -2080 340 145 818 152 23 15 chr17 49827503 49827635 -35610845 - FLAM_C SINE Alu 0 133 1 1654 160 3 85 chr17 49827639 49827798 -35610682 - AluJo SINE Alu -19 293 171 2480 76 7 0 chr17 49827798 49828099 -35610381 - AluY SINE Alu -8 303 1 1654 160 3 85 chr17 49828099 49828258 -35610222 - AluJo SINE Alu -141 171 1 819 183 88 95 chr17 49828258 49828438 -35610042 - MER58B DNA MER1_type -2278 142 1 224 317 19 29 chr17 49828867 49828971 -35609509 - L2 LINE L2 -217 3055 2953 225 0 0 0 chr17 49829197 49829222 -35609258 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 335 337 11 6 chr17 49829671 49829765 -35608715 + CT-rich Low_complexity Low_complexity 2 99 -81 201 39 0 0 chr17 49829765 49829791 -35608689 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 335 337 11 6 chr17 49829791 49829874 -35608606 + CT-rich Low_complexity Low_complexity 99 180 0 2179 121 3 7 chr17 49830111 49830416 -35608064 + AluSx SINE Alu 1 304 -8 231 36 0 0 chr17 49830619 49830647 -35607833 + (TGG)n Simple_repeat Simple_repeat 2 29 0 286 289 53 68 chr17 49833270 49833460 -35605020 - L2 LINE L2 -175 3138 2952 1477 127 24 0 chr17 49833497 49833709 -35604771 + AluSx SINE Alu 3 219 -93 574 315 104 10 chr17 49833968 49834276 -35604204 + L2 LINE L2 2447 2783 -531 287 258 0 43 chr17 49834474 49834567 -35603913 + L2 LINE L2 2791 2879 -435 716 320 173 21 chr17 49834630 49835498 -35602982 - L2 LINE L2 0 3272 2274 304 253 12 48 chr17 49835763 49835846 -35602634 - MIR3 SINE MIR -37 171 92 235 282 82 0 chr17 49836437 49836522 -35601958 + L2 LINE L2 3155 3246 -26 2266 105 0 20 chr17 49836830 49837136 -35601344 + AluSx SINE Alu 1 300 -12 2630 65 0 0 chr17 49837309 49837618 -35600862 - AluY SINE Alu -2 309 1 849 164 0 8 chr17 49837621 49837755 -35600725 - FLAM_A SINE Alu 0 133 1 243 163 190 0 chr17 49837801 49837863 -35600617 - MIR SINE MIR -63 145 73 227 245 20 0 chr17 49838012 49838061 -35600419 + CT-rich Low_complexity Low_complexity 1 50 0 344 303 151 17 chr17 49838332 49838570 -35599910 - LTR33 LTR ERVL -197 324 55 373 239 0 0 chr17 49838634 49838705 -35599775 + L2 LINE L2 3243 3313 0 198 0 51 51 chr17 49838740 49838779 -35599701 + (TAA)n Simple_repeat Simple_repeat 2 40 0 264 327 40 68 chr17 49839260 49839511 -35598969 + L2 LINE L2 87 330 -2984 1073 77 0 64 chr17 49839583 49839739 -35598741 + AluSq/x SINE Alu 6 151 -161 2482 188 64 61 chr17 49839754 49840032 -35598448 - L1ME2 LINE L1 -169 5995 5719 1746 158 11 15 chr17 49840032 49840305 -35598175 + AluJo SINE Alu 1 272 -40 2482 188 64 61 chr17 49840305 49840551 -35597929 - L1ME2 LINE L1 -445 5719 5475 2613 60 0 0 chr17 49840551 49840853 -35597627 - AluY SINE Alu -9 302 1 2482 188 64 61 chr17 49840853 49841163 -35597317 - L1ME2 LINE L1 -689 5475 5128 2266 97 10 19 chr17 49841183 49841493 -35596987 - AluSx SINE Alu -5 307 1 350 78 0 0 chr17 49841493 49841544 -35596936 - AluJb SINE Alu -167 135 85 2411 207 91 54 chr17 49841545 49842074 -35596406 - L1ME2 LINE L1 -1228 4918 4410 2342 68 0 0 chr17 49842074 49842391 -35596089 + AluY SINE Alu 1 317 0 2203 113 7 13 chr17 49842398 49842700 -35595780 + AluSx SINE Alu 1 300 -12 2411 207 91 54 chr17 49842700 49842944 -35595536 - L1ME2 LINE L1 -1741 4405 4100 2062 115 0 43 chr17 49842944 49843249 -35595231 + AluSx SINE Alu 1 292 -20 2411 207 91 54 chr17 49843249 49843311 -35595169 - L1ME2 LINE L1 -2046 4100 4042 307 244 23 119 chr17 49843313 49843450 -35595030 - HAL1 LINE L1 -1467 1040 891 347 0 0 23 chr17 49843450 49843494 -35594986 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 307 244 23 119 chr17 49843494 49843511 -35594969 - HAL1 LINE L1 -1616 891 901 2217 109 0 0 chr17 49843511 49843795 -35594685 - AluSg SINE Alu -26 284 1 307 244 23 119 chr17 49843795 49843815 -35594665 - HAL1 LINE L1 -1605 902 882 * 388 250 58 42 chr17 49843800 49843920 -35594560 - HAL1 LINE L1 -1574 933 812 340 315 31 30 chr17 49843920 49844147 -35594333 + MLT1J LTR MaLR 5 271 -240 961 250 144 10 chr17 49844400 49844696 -35593784 + Charlie1b DNA MER1_type 6 395 -2366 1754 164 36 13 chr17 49844696 49845000 -35593480 - AluJb SINE Alu -1 311 1 961 250 144 10 chr17 49845000 49845139 -35593341 + Charlie1b DNA MER1_type 395 514 -9 275 171 11 0 chr17 49845155 49845223 -35593257 + L1M4 LINE L1 1136 1384 -5825 * 3135 113 8 24 chr17 49845214 49845593 -35592887 - L1 LINE L1 -1367 4779 4410 2048 148 3 0 chr17 49845593 49845891 -35592589 + AluJb SINE Alu 1 299 -13 3135 113 8 24 chr17 49845891 49846044 -35592436 - L1 LINE L1 -1736 4410 4256 1479 125 84 13 chr17 49846054 49846365 -35592115 + L1M4 LINE L1 2377 2709 -4500 496 224 0 0 chr17 49846368 49846453 -35592027 + AluJo SINE Alu 2 86 -226 258 32 0 0 chr17 49847292 49847323 -35591157 + (T)n Simple_repeat Simple_repeat 1 31 0 1264 216 0 0 chr17 49848106 49848319 -35590161 + AluJo SINE Alu 73 285 -27 3082 163 28 29 chr17 49848330 49848903 -35589577 + L1M4 LINE L1 2702 3274 -3934 2346 93 3 0 chr17 49848903 49849203 -35589277 - AluSx SINE Alu -11 301 1 3082 163 28 29 chr17 49849203 49849531 -35588949 + L1M4 LINE L1 3274 3601 -3607 1968 142 3 3 chr17 49849531 49849834 -35588646 + AluJb SINE Alu 1 303 0 3082 163 28 29 chr17 49849834 49850169 -35588311 + L1M4 LINE L1 3601 3941 -3267 2060 115 0 40 chr17 49850437 49850741 -35587739 - AluSx SINE Alu -20 292 1 2396 206 93 46 chr17 49850743 49850985 -35587495 + L1M4 LINE L1 5161 5390 -1818 2203 113 7 13 chr17 49850985 49851287 -35587193 - AluSx SINE Alu -12 300 1 2341 68 0 0 chr17 49851294 49851611 -35586869 - AluY SINE Alu 0 317 1 2396 206 93 46 chr17 49851611 49852142 -35586338 + L1M4 LINE L1 5395 5980 -1228 350 78 0 0 chr17 49852143 49852194 -35586286 + AluJ SINE Alu 85 135 -167 2087 129 4 0 chr17 49852194 49852473 -35586007 + AluSx SINE Alu 1 280 -32 240 35 0 0 chr17 49852473 49852502 -35585978 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2186 124 13 3 chr17 49854190 49854544 -35583936 + AluJb SINE Alu 1 357 0 878 150 0 0 chr17 49856521 49856654 -35581826 + AluJ SINE Alu 137 269 -43 297 0 0 0 chr17 49856658 49856691 -35581789 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 363 240 23 93 chr17 49856931 49857060 -35581420 - L2 LINE L2 -1 3312 3193 2293 109 20 0 chr17 49860425 49860728 -35577752 - AluSq SINE Alu -4 309 1 1796 169 10 17 chr17 49860773 49861074 -35577406 - AluJb SINE Alu -12 300 2 704 177 73 0 chr17 49861077 49861201 -35577279 - FLAM_A SINE Alu 0 133 1 238 325 75 66 chr17 49861554 49861766 -35576714 + MIR SINE MIR 35 248 -14 2335 101 10 0 chr17 49862092 49862390 -35576090 - AluSx SINE Alu -11 301 1 202 302 93 23 chr17 49863464 49863550 -35574930 - MIR3 SINE MIR -15 193 102 2079 148 3 3 chr17 49864391 49864701 -35573779 - AluJb SINE Alu -2 310 1 430 241 163 14 chr17 49864979 49865120 -35573360 - MIR SINE MIR -68 194 33 265 360 0 0 chr17 49866308 49866394 -35572086 - MIR SINE MIR -81 127 42 373 206 0 11 chr17 49866424 49866516 -35571964 - L1MC4 LINE L1 -30 8012 7922 2416 65 10 7 chr17 49866595 49866905 -35571575 - AluSp SINE Alu -2 311 1 375 175 0 0 chr17 49866906 49866969 -35571511 - L1MA4A LINE L1 -331 5972 5910 2013 149 7 10 chr17 49866971 49867279 -35571201 + AluJb SINE Alu 1 307 -5 7250 165 33 28 chr17 49867279 49867639 -35570841 - L1 LINE L1 -1585 4561 4204 726 86 57 0 chr17 49867639 49867744 -35570736 - HY1 scRNA scRNA -1 111 1 7250 165 33 28 chr17 49867744 49867845 -35570635 - L1 LINE L1 -1942 4204 4105 2198 88 7 11 chr17 49867845 49868159 -35570321 + AluSp SINE Alu 1 313 0 7250 165 33 28 chr17 49868159 49869311 -35569169 - L1 LINE L1 -2041 4105 2934 2415 103 3 0 chr17 49869311 49869621 -35568859 - AluSp SINE Alu -2 311 1 7250 165 33 28 chr17 49869621 49869663 -35568817 - L1 LINE L1 -3212 2934 2894 8095 77 12 187 chr17 49869705 49871380 -35567100 - SVA Other Other 0 1386 4 288 70 0 0 chr17 49871383 49871426 -35567054 + (CAAG)n Simple_repeat Simple_repeat 2 44 0 318 176 0 27 chr17 49871426 49871493 -35566987 - L1 LINE L1 -3214 2932 2866 2012 138 17 0 chr17 49871493 49871784 -35566696 + AluSx SINE Alu 1 296 -16 2370 107 3 0 chr17 49871810 49872119 -35566361 + AluSp SINE Alu 1 310 -3 1080 95 0 208 chr17 49872728 49873108 -35565372 - AluY SINE Alu 0 301 1 405 182 0 0 chr17 49873545 49873611 -35564869 + L2 LINE L2 3245 3310 -3 448 241 134 50 chr17 49873648 49873827 -35564653 - MIR3 SINE MIR -54 154 4 2087 106 0 4 chr17 49874511 49874812 -35563668 - AluSx SINE Alu 0 313 14 180 252 311 10 chr17 49875151 49875254 -35563226 - L2 LINE L2 0 3272 3139 238 389 0 0 chr17 49875293 49875432 -35563048 + (TG)n Simple_repeat Simple_repeat 2 140 0 198 0 51 51 chr17 49876205 49876244 -35562236 + (TTA)n Simple_repeat Simple_repeat 2 40 0 373 239 0 0 chr17 49876279 49876350 -35562130 - L2 LINE L2 0 3313 3243 344 303 151 17 chr17 49876414 49876652 -35561828 + LTR33 LTR ERVL 55 324 -197 227 245 20 0 chr17 49876923 49876972 -35561508 + GA-rich Low_complexity Low_complexity 1 50 0 243 163 190 0 chr17 49877121 49877183 -35561297 + MIR SINE MIR 73 145 -63 849 164 0 8 chr17 49877229 49877363 -35561117 + FLAM_A SINE Alu 1 133 0 2343 64 6 25 chr17 49877366 49877680 -35560800 + AluY SINE Alu 1 308 -3 2266 105 0 20 chr17 49877853 49878159 -35560321 - AluSx SINE Alu -12 300 1 230 294 82 0 chr17 49878467 49878552 -35559928 - L2 LINE L2 -26 3246 3155 229 265 24 60 chr17 49879143 49879226 -35559254 + MIR3 SINE MIR 92 171 -37 2195 84 4 0 chr17 49880794 49881067 -35557413 + AluSq SINE Alu 28 301 -12 351 0 0 0 chr17 49881998 49882037 -35556443 + (TG)n Simple_repeat Simple_repeat 2 40 0 426 198 23 4 chr17 49882307 49882441 -35556039 + MER53 DNA DNA 1 187 -2 180 313 79 69 chr17 49882781 49883072 -35555408 + L2 LINE L2 2683 2976 -338 322 290 49 80 chr17 49883095 49883257 -35555223 - L2 LINE L2 -1 3312 3156 26 0 0 0 chr17 49883522 49883548 -35554932 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr17 49883582 49883604 -35554876 + AT_rich Low_complexity Low_complexity 1 22 0 2103 118 7 0 chr17 49883651 49883940 -35554540 - AluSx SINE Alu -21 291 1 2387 107 0 19 chr17 49883942 49884260 -35554220 - AluSx SINE Alu 0 312 1 295 298 128 28 chr17 49884270 49884338 -35554142 - Charlie8 DNA MER1_type -183 158 98 2091 146 7 0 chr17 49884338 49884647 -35553833 - AluSq SINE Alu -2 311 1 295 298 128 28 chr17 49884647 49884719 -35553761 - Charlie8 DNA MER1_type -243 98 4 305 282 0 0 chr17 49884796 49884867 -35553613 + L2 LINE L2 3201 3271 -1 1611 59 0 54 chr17 49884904 49885126 -35553354 - AluY SINE Alu -3 308 99 1882 159 0 0 chr17 49885583 49885892 -35552588 - AluSc SINE Alu 0 309 1 618 220 60 12 chr17 49885906 49886074 -35552406 + FRAM SINE Alu 1 173 -3 517 86 0 0 chr17 49886269 49886339 -35552141 + Alu SINE Alu 227 296 -14 1589 99 127 12 chr17 49886837 49887113 -35551367 - AluSg SINE Alu 0 305 1 368 245 75 28 chr17 49887190 49887296 -35551184 - MIR SINE MIR -78 184 74 2065 127 3 0 chr17 49887484 49887783 -35550697 + AluSx SINE Alu 1 300 -12 960 107 0 15 chr17 49888542 49888673 -35549807 - FLAM_C SINE Alu -4 129 1 2208 92 3 10 chr17 49888681 49888985 -35549495 - AluSg SINE Alu -8 302 1 2134 93 0 3 chr17 49889028 49889348 -35549132 - AluSc SINE Alu 0 309 1 2104 116 7 0 chr17 49889348 49889649 -35548831 - AluSq SINE Alu -10 303 1 2228 76 3 7 chr17 49889863 49890154 -35548326 - AluSq SINE Alu -23 290 1 254 254 14 0 chr17 49890353 49890424 -35548056 + (TG)n Simple_repeat Simple_repeat 2 73 0 395 238 63 42 chr17 49890424 49890567 -35547913 + L1MC4 LINE L1 7896 8041 -1 388 318 9 0 chr17 49890657 49890764 -35547716 - MIR SINE MIR -110 152 45 2315 72 3 7 chr17 49891047 49891351 -35547129 - AluSc SINE Alu -6 303 1 371 195 50 178 chr17 49894349 49894647 -35543833 - L1MC4 LINE L1 -2 8040 7781 636 252 103 38 chr17 49894730 49895318 -35543162 - L1MC5 LINE L1 -330 7631 7096 1059 139 0 0 chr17 49895613 49895771 -35542709 - AluJb SINE Alu -10 302 145 2115 116 0 3 chr17 49896293 49896603 -35541877 - AluSc SINE Alu 0 309 1 723 208 69 0 chr17 49896617 49896761 -35541719 + AluJb SINE Alu 134 287 -25 180 0 0 0 chr17 49896764 49896784 -35541696 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1049 292 126 60 chr17 49897948 49898034 -35540446 - L2 LINE L2 0 3272 3193 2125 85 0 0 chr17 49898034 49898348 -35540132 + AluSx SINE Alu 1 314 0 1049 292 126 60 chr17 49898348 49898839 -35539641 - L2 LINE L2 -79 3193 2736 2007 120 0 0 chr17 49898839 49899152 -35539328 - AluSp SINE Alu 0 313 1 2102 65 7 52 chr17 49899154 49899462 -35539018 - AluSx SINE Alu -18 294 1 1049 292 126 60 chr17 49899462 49900061 -35538419 - L2 LINE L2 -536 2736 2022 229 302 0 42 chr17 49900071 49900167 -35538313 + MLT1K LTR MaLR 26 117 -471 23 33 0 0 chr17 49900253 49900283 -35538197 + AT_rich Low_complexity Low_complexity 1 30 0 1661 165 3 3 chr17 49900283 49900568 -35537912 - AluJb SINE Alu -27 285 1 208 318 171 0 chr17 49900568 49900656 -35537824 + L2 LINE L2 2875 2977 -336 2080 89 10 16 chr17 49900982 49901285 -35537195 - AluSq SINE Alu -12 301 1 1312 134 58 5 chr17 49901292 49901515 -35536965 - AluJb SINE Alu -2 310 76 1068 328 105 21 chr17 49901516 49902267 -35536213 - L2 LINE L2 -52 3261 2442 2311 74 0 22 chr17 49902270 49902581 -35535899 - AluY SINE Alu -7 304 1 1866 148 0 16 chr17 49902592 49902909 -35535571 - AluSx SINE Alu 0 312 1 188 289 0 0 chr17 49903075 49903127 -35535353 + MIR3 SINE MIR 151 202 -6 1679 149 46 13 chr17 49903897 49904199 -35534281 - AluJb SINE Alu 0 312 1 881 218 15 10 chr17 49904200 49904397 -35534083 - AluJo SINE Alu -1 311 114 252 0 0 0 chr17 49904749 49904777 -35533703 + (CAG)n Simple_repeat Simple_repeat 3 30 0 359 280 56 14 chr17 49904879 49905022 -35533458 + LTR67 LTR ERVL 406 554 -3 1726 138 0 4 chr17 49905313 49905443 -35533037 + AluSx SINE Alu 3 132 -180 2279 56 38 0 chr17 49905443 49905731 -35532749 + AluY SINE Alu 1 299 -12 1726 138 0 4 chr17 49905731 49905875 -35532605 + AluSx SINE Alu 132 276 -36 327 284 135 7 chr17 49905890 49906038 -35532442 - MIR SINE MIR -64 198 32 2149 91 0 3 chr17 49907788 49908074 -35530406 - AluSx SINE Alu -17 295 11 237 65 0 0 chr17 49908586 49908617 -35529863 + (TG)n Simple_repeat Simple_repeat 2 32 0 847 159 6 37 chr17 49908671 49908834 -35529646 - FRAM SINE Alu -1 175 18 1796 135 36 0 chr17 49908847 49909128 -35529352 - AluJo SINE Alu -21 291 1 27 0 0 0 chr17 49909132 49909159 -35529321 + AT_rich Low_complexity Low_complexity 1 27 0 279 0 0 0 chr17 49909382 49909413 -35529067 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2321 50 3 0 chr17 49909416 49909698 -35528782 - AluY SINE Alu -28 283 1 1968 105 19 42 chr17 49909706 49909879 -35528601 - AluSx SINE Alu 0 312 148 2327 38 55 0 chr17 49909879 49910172 -35528308 - AluY SINE Alu -2 309 1 1968 105 19 42 chr17 49910172 49910311 -35528169 - AluSx SINE Alu -164 148 7 183 80 0 0 chr17 49910781 49910806 -35527674 + (GGGGA)n Simple_repeat Simple_repeat 2 26 0 215 175 0 16 chr17 49910889 49910952 -35527528 + (TG)n Simple_repeat Simple_repeat 2 63 0 1572 152 22 7 chr17 49911225 49911495 -35526985 - AluJb SINE Alu -18 294 21 29 28 0 0 chr17 49911558 49911594 -35526886 + AT_rich Low_complexity Low_complexity 1 36 0 1856 133 26 16 chr17 49912027 49912335 -35526145 + AluSx SINE Alu 1 311 -1 2128 106 10 0 chr17 49912337 49912629 -35525851 + AluSx SINE Alu 1 295 -17 1984 145 46 3 chr17 49916723 49917048 -35521432 - MER44D DNA MER2_type 0 609 1 410 249 185 67 chr17 49917214 49917620 -35520860 + L1MC5 LINE L1 7269 7722 -239 306 213 21 64 chr17 49917630 49917724 -35520756 + L1MC5 LINE L1 7794 7883 -78 2043 102 0 3 chr17 49917854 49918163 -35520317 + AluSp SINE Alu 1 308 0 2335 184 137 17 chr17 49918250 49918826 -35519654 + MER82 DNA MER2_type 1 645 -8 225 324 65 28 chr17 49919088 49919196 -35519284 - L2 LINE L2 -1 3312 3201 302 182 0 0 chr17 49919731 49919786 -35518694 + L1MB7 LINE L1 5908 5962 -222 633 146 28 5 chr17 49919835 49919963 -35518517 + L1MB7 LINE L1 6055 6183 -1 1960 130 0 10 chr17 49919984 49920283 -35518197 + AluSx SINE Alu 1 296 -16 21 0 0 0 chr17 49920582 49920603 -35517877 + AT_rich Low_complexity Low_complexity 1 21 0 249 33 0 0 chr17 49921737 49921767 -35516713 + (A)n Simple_repeat Simple_repeat 1 30 0 2089 96 31 0 chr17 49921936 49922228 -35516252 + AluSx SINE Alu 1 301 -11 1475 160 64 25 chr17 49922260 49922542 -35515938 - AluJo SINE Alu -19 293 1 2227 102 0 3 chr17 49923480 49923783 -35514697 + AluSc SINE Alu 1 302 -7 180 329 99 56 chr17 49924068 49924281 -35514199 - L2 LINE L2 -7 3306 3085 1699 151 36 0 chr17 49924758 49925037 -35513443 + AluSx SINE Alu 5 293 -19 992 142 13 0 chr17 49925546 49925701 -35512779 + AluJb SINE Alu 140 296 -16 336 250 196 20 chr17 49927931 49928079 -35510401 + MIR SINE MIR 73 246 -16 193 215 0 108 chr17 49928305 49928325 -35510155 - L3 LINE CR1 -1192 385 364 1950 120 0 58 chr17 49928325 49928650 -35509830 + AluSx SINE Alu 1 306 -6 1604 171 53 41 chr17 49928652 49928991 -35509489 + MER2 DNA MER2_type 1 343 -1 193 215 0 108 chr17 49928991 49929032 -35509448 - L3 LINE CR1 -1214 363 328 2072 119 33 36 chr17 49929142 49929504 -35508976 + L1PA16 LINE L1 5806 6166 0 2164 86 3 45 chr17 49929516 49929830 -35508650 + AluSg SINE Alu 1 301 -9 397 185 110 75 chr17 49929830 49929967 -35508513 + L1ME4a LINE L1 5970 6114 -7 2190 86 41 0 chr17 49929992 49930282 -35508198 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr17 49930705 49930726 -35507754 + AT_rich Low_complexity Low_complexity 1 21 0 2037 112 7 0 chr17 49931111 49931405 -35507075 + AluSx SINE Alu 1 296 -16 1020 151 0 0 chr17 49931528 49931687 -35506793 - AluJb SINE Alu -25 287 129 2094 122 0 0 chr17 49931975 49932271 -35506209 + AluSq SINE Alu 1 296 -17 453 324 120 22 chr17 49932312 49932537 -35505943 - MIR SINE MIR -5 257 11 202 287 129 10 chr17 49932958 49933059 -35505421 - L2 LINE L2 -1408 1906 1794 273 57 0 0 chr17 49933082 49933117 -35505363 + (CTA)n Simple_repeat Simple_repeat 2 36 0 2279 102 0 3 chr17 49933780 49934093 -35504387 + AluSx SINE Alu 1 312 0 2058 125 13 0 chr17 49934112 49934416 -35504064 + AluSx SINE Alu 1 308 -4 228 274 29 69 chr17 49934416 49934518 -35503962 + MIR SINE MIR 48 145 -63 1046 281 85 53 chr17 49934523 49935466 -35503014 + L2 LINE L2 2283 3310 -3 630 233 83 0 chr17 49936864 49936997 -35501483 + L2 LINE L2 3168 3311 -2 1550 151 12 0 chr17 49937699 49937950 -35500530 - AluJo SINE Alu -47 265 12 2513 50 0 0 chr17 49938056 49938357 -35500123 - AluY SINE Alu -10 301 1 2413 69 0 0 chr17 49938731 49939037 -35499443 + AluY SINE Alu 1 306 -5 1840 130 49 11 chr17 49939057 49939342 -35499138 + AluSx SINE Alu 1 296 -16 1452 203 7 14 chr17 49939425 49939716 -35498764 + AluJb SINE Alu 1 289 -23 2075 81 10 17 chr17 49939771 49940068 -35498412 - AluSq SINE Alu -16 297 3 441 310 41 0 chr17 49940169 49940366 -35498114 + L1MC/D LINE L1 5615 5819 -1989 2071 120 0 0 chr17 49940666 49940957 -35497523 + AluJb SINE Alu 1 291 -21 1343 156 12 16 chr17 49941030 49941274 -35497206 + AluSx SINE Alu 61 303 -9 1041 281 116 48 chr17 49941360 49941834 -35496646 + L2 LINE L2 2806 3311 -2 2519 43 0 0 chr17 49942145 49942445 -35496035 + AluY SINE Alu 1 300 -11 1313 196 3 36 chr17 49942488 49942794 -35495686 + AluJo SINE Alu 3 298 -14 2015 109 14 0 chr17 49942794 49943079 -35495401 + AluSg SINE Alu 14 302 -8 859 220 153 34 chr17 49944604 49944899 -35493581 - MER102a DNA MER1_type 0 330 1 2436 75 0 0 chr17 49945093 49945400 -35493080 + AluY SINE Alu 1 307 -4 25 31 0 0 chr17 49945828 49945860 -35492620 + AT_rich Low_complexity Low_complexity 1 32 0 726 283 53 29 chr17 49945891 49946135 -35492345 + MIR SINE MIR 3 252 -10 958 123 26 0 chr17 49947168 49947322 -35491158 - L1MA6 LINE L1 -6 6294 6137 32 0 0 0 chr17 49947326 49947358 -35491122 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr17 49947426 49947448 -35491032 + AT_rich Low_complexity Low_complexity 1 22 0 204 254 85 17 chr17 49947586 49947645 -35490835 + MER91C DNA MER1_type 43 105 -35 411 314 48 70 chr17 49947776 49947870 -35490610 + L2 LINE L2 2933 3028 -244 2109 114 0 0 chr17 49947870 49948167 -35490313 + AluSx SINE Alu 1 297 -15 411 314 48 70 chr17 49948167 49948387 -35490093 + L2 LINE L2 3028 3240 -32 2162 98 7 0 chr17 49948585 49948882 -35489598 + AluSc SINE Alu 1 299 -10 1797 160 12 168 chr17 49949258 49949343 -35489137 - MER47B DNA MER2_type -1905 418 321 1773 169 0 10 chr17 49949343 49949644 -35488836 + AluJo SINE Alu 1 298 -14 1797 160 12 168 chr17 49949644 49950053 -35488427 - MER47B DNA MER2_type -2002 321 1 210 37 0 0 chr17 49950137 49950164 -35488316 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2178 70 0 0 chr17 49950807 49951080 -35487400 - AluSq SINE Alu -40 273 1 521 269 67 10 chr17 49951714 49951907 -35486573 - MER46C DNA MER2_type -133 205 2 2162 109 0 0 chr17 49951963 49952267 -35486213 + AluSq SINE Alu 1 304 -9 241 328 147 9 chr17 49952688 49952804 -35485676 + L2 LINE L2 3133 3264 -8 206 286 129 61 chr17 49952810 49952957 -35485523 + MIR3 SINE MIR 45 201 -7 1765 157 23 0 chr17 49955346 49955651 -35482829 - AluJb SINE Alu 0 312 1 2239 92 3 0 chr17 49955660 49955965 -35482515 - AluSp SINE Alu -7 306 1 756 244 41 50 chr17 49956845 49956921 -35481559 + MIR SINE MIR 23 98 -164 1862 144 13 3 chr17 49956921 49957227 -35481253 - AluJo SINE Alu -3 309 1 756 244 41 50 chr17 49957227 49957392 -35481088 + MIR SINE MIR 98 262 0 356 333 27 94 chr17 49957569 49957899 -35480581 - L2 LINE L2 -51 3221 2914 332 373 52 20 chr17 49957943 49958195 -35480285 - L2 LINE L2 -492 2822 2563 327 247 180 0 chr17 49959496 49959585 -35478895 - L2 LINE L2 0 3272 3168 2090 129 0 0 chr17 49959748 49960051 -35478429 - AluSx SINE Alu -8 304 2 2446 55 3 10 chr17 49960058 49960366 -35478114 - AluY SINE Alu -5 306 1 1818 151 7 3 chr17 49960467 49960765 -35477715 - AluJb SINE Alu -13 299 1 273 293 80 38 chr17 49961022 49961234 -35477246 - L1P2 LINE L1 -599 5555 5335 1828 119 47 0 chr17 49961344 49961621 -35476859 + AluSg SINE Alu 1 290 -20 1360 150 40 20 chr17 49961789 49962042 -35476438 + AluSq SINE Alu 1 258 -55 1244 285 48 45 chr17 49963194 49963782 -35474698 + L2 LINE L2 2725 3313 0 400 302 47 0 chr17 49964092 49964198 -35474282 + L2 LINE L2 3153 3263 -9 653 241 24 36 chr17 49966151 49966317 -35472163 + MIR SINE MIR 77 240 -22 1952 105 4 0 chr17 49967174 49967440 -35471040 + AluSx SINE Alu 2 268 -44 632 188 0 90 chr17 49967460 49967645 -35470835 + MER69A DNA AcHobo 2 170 -7 2279 79 0 0 chr17 49967807 49968097 -35470383 + AluSg SINE Alu 5 294 -16 1219 150 14 32 chr17 49968097 49968317 -35470163 + AluJb SINE Alu 83 298 -14 2205 104 0 0 chr17 49968407 49968705 -35469775 + AluSp SINE Alu 1 298 -15 2156 93 3 13 chr17 49968968 49969143 -35469337 - AluSg SINE Alu -3 307 135 2196 78 10 3 chr17 49969143 49969437 -35469043 - AluSg SINE Alu -14 296 1 2156 93 3 13 chr17 49969437 49969571 -35468909 - AluSg SINE Alu -175 135 1 2067 100 7 3 chr17 49969700 49969991 -35468489 - AluY SINE Alu -19 292 1 1063 112 0 0 chr17 49969992 49970135 -35468345 - AluSg SINE Alu -167 143 1 1542 203 3 3 chr17 49970156 49970451 -35468029 - AluJo SINE Alu -17 295 1 258 258 158 50 chr17 49970842 49970962 -35467518 - L2 LINE L2 -1 3312 3180 1602 186 23 58 chr17 49971160 49971232 -35467248 - L1MB8 LINE L1 -1 6177 6104 1995 122 3 7 chr17 49971232 49971536 -35466944 - AluSx SINE Alu -9 303 1 2052 126 0 0 chr17 49971538 49971839 -35466641 - AluJb SINE Alu -11 301 1 1602 186 23 58 chr17 49971839 49972161 -35466319 - L1MB8 LINE L1 -75 6103 5794 2229 109 0 0 chr17 49972169 49972471 -35466009 - AluSg SINE Alu -8 302 1 353 319 57 13 chr17 49972501 49972658 -35465822 + MIR3 SINE MIR 20 183 -25 2292 48 0 24 chr17 49972719 49973044 -35465436 - AluY SINE Alu 0 318 1 2201 110 3 0 chr17 49973139 49973447 -35465033 - AluSx SINE Alu -3 309 1 2093 103 7 3 chr17 49974538 49974838 -35463642 - AluSg1 SINE Alu -8 301 1 330 281 47 55 chr17 49974966 49975094 -35463386 + L2 LINE L2 3146 3272 0 617 259 44 49 chr17 49975925 49976130 -35462350 + MIR SINE MIR 15 218 -44 397 303 96 27 chr17 49976249 49976437 -35462043 + MIR SINE MIR 60 260 -2 194 340 57 9 chr17 49976523 49976629 -35461851 + MIR SINE MIR 107 217 -45 205 167 15 76 chr17 49978375 49978441 -35460039 + G-rich Low_complexity Low_complexity 5 66 0 232 200 0 94 chr17 49978609 49978694 -35459786 + G-rich Low_complexity Low_complexity 2 78 0 363 78 0 0 chr17 49979286 49979337 -35459143 + (TG)n Simple_repeat Simple_repeat 2 52 0 904 167 157 10 chr17 49980825 49981029 -35457451 + MIR SINE MIR 18 251 -11 1092 208 18 5 chr17 49981908 49982129 -35456351 + MER58A DNA MER1_type 1 224 0 2125 83 7 0 chr17 49983779 49984117 -35454363 - AluSg SINE Alu 0 340 1 2004 108 3 10 chr17 49984119 49984414 -35454066 - AluSx SINE Alu -19 293 1 2013 144 0 3 chr17 49985514 49985827 -35452653 - AluSx SINE Alu 0 312 1 551 189 59 0 chr17 49985827 49985936 -35452544 - FRAM SINE Alu -13 163 57 2556 73 3 0 chr17 49987400 49987703 -35450777 - AluSp SINE Alu -8 305 2 308 238 0 0 chr17 49987806 49987869 -35450611 + AluJb SINE Alu 123 185 -117 849 217 0 0 chr17 49987869 49988035 -35450445 + AluJo/FRAM SINE Alu 146 311 -1 907 129 0 0 chr17 49988035 49988167 -35450313 - MER2 DNA MER2_type -213 132 1 1602 148 9 88 chr17 49988364 49988547 -35449933 - AluJo SINE Alu -19 293 144 2518 71 3 3 chr17 49988547 49988856 -35449624 - AluY SINE Alu -2 309 1 1602 148 9 88 chr17 49988856 49988990 -35449490 - AluJo SINE Alu -168 144 1 2540 53 0 7 chr17 49991755 49992054 -35446426 + AluY SINE Alu 1 297 -14 23 54 0 0 chr17 49993465 49993502 -35444978 + AT_rich Low_complexity Low_complexity 1 37 0 199 331 25 41 chr17 49994420 49994541 -35443939 + MIR SINE MIR 13 131 -131 190 298 69 23 chr17 49995596 49995727 -35442753 - L2 LINE L2 -332 2940 2804 2261 83 42 3 chr17 49995759 49996047 -35442433 + AluY SINE Alu 1 299 -12 186 43 0 0 chr17 49996206 49996229 -35442251 + (CA)n Simple_repeat Simple_repeat 2 24 0 261 232 62 0 chr17 49996262 49996374 -35442106 + L1ME4a LINE L1 5998 6116 -5 976 120 0 0 chr17 49996539 49996672 -35441808 + FLAM_C SINE Alu 1 133 0 435 314 69 11 chr17 49996674 49996862 -35441618 + L1ME4a LINE L1 5750 5948 -173 1603 94 10 0 chr17 49996903 49997105 -35441375 - AluSg/x SINE Alu -19 293 90 2370 164 124 16 chr17 49997116 49997664 -35440816 - L1MB4 LINE L1 0 6180 5574 2363 88 0 0 chr17 49997686 49997993 -35440487 - AluY SINE Alu -4 307 1 2408 87 0 3 chr17 49998144 49998443 -35440037 - AluY SINE Alu -13 298 1 2218 107 20 3 chr17 49998608 49998908 -35439572 - AluSx SINE Alu -7 305 1 1177 122 6 0 chr17 49999887 50000051 -35438429 - AluSq SINE Alu -18 295 131 2342 108 0 3 chr17 50000218 50000524 -35437956 + AluSx SINE Alu 1 305 -7 229 313 78 16 chr17 50000771 50000835 -35437645 - L3b LINE CR1 -11 1572 1505 187 220 100 0 chr17 50000931 50000981 -35437499 - L3b LINE CR1 -228 1355 1301 190 315 55 55 chr17 50001210 50001356 -35437124 - L2 LINE L2 -4 3309 3164 2446 87 3 0 chr17 50002501 50002801 -35435679 + AluSc SINE Alu 1 301 -8 2207 110 0 26 chr17 50004875 50005184 -35433296 - AluSx SINE Alu -9 303 3 2076 143 6 13 chr17 50005296 50005610 -35432870 - AluJo SINE Alu 0 312 1 2302 89 3 3 chr17 50005862 50006154 -35432326 + AluSq SINE Alu 5 296 -17 1504 203 148 48 chr17 50006200 50006658 -35431822 - MLT1D LTR MaLR 0 505 2 1456 281 103 2 chr17 50006663 50007079 -35431401 + L2 LINE L2 2856 3313 0 2105 114 47 3 chr17 50007491 50007819 -35430661 - AluSx SINE Alu 0 341 1 2016 122 19 32 chr17 50010250 50010562 -35427918 - AluSq SINE Alu -5 308 1 2164 102 18 0 chr17 50011357 50011642 -35426838 + AluSg SINE Alu 1 290 -20 2337 67 11 0 chr17 50013094 50013379 -35425101 - AluSq SINE Alu -16 297 10 2058 78 29 7 chr17 50013382 50013663 -35424817 - AluSc SINE Alu -16 293 7 2443 72 0 10 chr17 50013677 50013983 -35424497 - AluY SINE Alu -8 303 1 281 270 105 75 chr17 50014335 50014535 -35423945 - L2 LINE L2 -84 3229 3024 253 254 0 0 chr17 50015392 50015447 -35423033 - MIR SINE MIR -50 212 158 2175 107 3 10 chr17 50017420 50017718 -35420762 + AluSx SINE Alu 1 296 -16 2127 132 0 10 chr17 50017731 50018034 -35420446 + AluSx SINE Alu 1 300 -12 1820 156 14 7 chr17 50018563 50018852 -35419628 + AluJo SINE Alu 1 291 -21 257 153 83 56 chr17 50018862 50018934 -35419546 + L1ME3A LINE L1 6097 6170 0 1880 152 3 37 chr17 50019181 50019504 -35418976 + AluJo SINE Alu 1 312 0 1288 167 0 26 chr17 50019634 50019868 -35418612 + AluJb SINE Alu 81 308 -4 1060 133 0 89 chr17 50019924 50020127 -35418353 + MER20 DNA MER1_type 33 217 -2 2329 113 0 3 chr17 50020204 50020506 -35417974 - AluSx SINE Alu -11 301 1 225 299 0 13 chr17 50020556 50020633 -35417847 - L3b LINE CR1 -189 1394 1319 573 332 58 0 chr17 50022757 50022998 -35415482 - MIR SINE MIR -6 256 2 225 251 107 29 chr17 50023000 50023109 -35415371 - MIR SINE MIR -59 149 33 348 269 28 64 chr17 50023749 50023890 -35414590 - MIR SINE MIR -70 192 57 348 111 0 0 chr17 50025968 50026022 -35412458 + (T)n Simple_repeat Simple_repeat 1 54 0 180 0 0 0 chr17 50026246 50026266 -35412214 + (A)n Simple_repeat Simple_repeat 1 20 0 313 297 69 10 chr17 50026361 50026462 -35412018 + L2 LINE L2 3158 3264 -8 941 225 50 18 chr17 50027602 50027820 -35410660 - MIR SINE MIR -30 232 8 264 30 0 0 chr17 50028987 50029020 -35409460 + (TG)n Simple_repeat Simple_repeat 1 33 0 2285 104 7 7 chr17 50031621 50031928 -35406552 - AluSx SINE Alu -5 307 1 973 240 169 31 chr17 50032113 50032733 -35405747 - L1MC4a LINE L1 -1693 6115 5410 1827 123 0 17 chr17 50033181 50033482 -35404998 + L1 LINE L1 3376 3671 -2475 2313 103 3 3 chr17 50033491 50033801 -35404679 - AluSp SINE Alu -3 310 1 944 268 128 61 chr17 50034015 50034133 -35404347 - L1MC4 LINE L1 -9 8033 7924 2450 59 0 3 chr17 50034133 50034442 -35404038 - AluY SINE Alu 0 308 1 944 268 128 61 chr17 50034442 50034702 -35403778 - L1MC4 LINE L1 -118 7924 7683 2187 134 0 0 chr17 50034702 50035001 -35403479 - AluSx SINE Alu -13 299 1 944 268 128 61 chr17 50035001 50035486 -35402994 - L1MC4 LINE L1 -359 7683 7110 2238 107 0 0 chr17 50035516 50035807 -35402673 - AluY SINE Alu -20 291 1 1011 126 0 0 chr17 50035807 50035942 -35402538 - AluSq/x SINE Alu -178 135 1 404 215 202 25 chr17 50035947 50036241 -35402239 - L1MC4 LINE L1 -884 7077 6768 509 43 86 0 chr17 50036303 50036373 -35402107 - MADE1 DNA Mariner -2 78 3 2426 90 0 0 chr17 50037881 50038181 -35400299 - AluSc SINE Alu -9 300 1 25 0 0 0 chr17 50038181 50038206 -35400274 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr17 50038222 50038251 -35400229 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr17 50038270 50038295 -35400185 + AT_rich Low_complexity Low_complexity 1 25 0 2314 86 3 0 chr17 50038299 50038590 -35399890 + AluSx SINE Alu 1 292 -20 2474 53 0 10 chr17 50038590 50038890 -35399590 + AluY SINE Alu 1 297 -14 252 212 0 0 chr17 50038891 50038957 -35399523 + (TA)n Simple_repeat Simple_repeat 2 67 0 305 289 67 0 chr17 50038957 50039047 -35399433 - L1MC4 LINE L1 -16 8026 7931 323 271 66 30 chr17 50039235 50039401 -35399079 - L1ME1 LINE L1 -288 5878 5707 4005 142 45 3 chr17 50039410 50040058 -35398422 - L1MB2 LINE L1 -3 6168 5490 2056 143 3 0 chr17 50040058 50040358 -35398122 - AluSx SINE Alu -11 301 1 4005 142 45 3 chr17 50040358 50040372 -35398108 - L1MB2 LINE L1 -681 5490 5478 240 108 0 0 chr17 50040422 50040459 -35398021 - L1MB2 LINE L1 -684 5487 5451 2252 115 3 0 chr17 50040465 50040769 -35397711 - AluSq SINE Alu -8 305 1 2036 141 0 3 chr17 50040821 50041120 -35397360 - AluSx SINE Alu -14 298 1 519 255 89 97 chr17 50041123 50041171 -35397309 - L1MB2 LINE L1 -982 5164 5117 417 20 0 0 chr17 50041171 50041221 -35397259 + (TG)n Simple_repeat Simple_repeat 2 51 0 519 255 89 97 chr17 50041221 50041655 -35396825 - L1MB2 LINE L1 -1029 5117 4686 2283 95 17 0 chr17 50041670 50041964 -35396516 - AluSx SINE Alu -13 299 1 417 20 0 0 chr17 50041970 50042020 -35396460 + (TG)n Simple_repeat Simple_repeat 2 51 0 2370 77 3 3 chr17 50042034 50042333 -35396147 - AluY SINE Alu -12 299 1 5950 171 75 8 chr17 50043048 50044256 -35394224 - Charlie1a DNA MER1_type 0 1455 165 1951 137 24 12 chr17 50044256 50044591 -35393889 - MER1B DNA MER1_type 0 339 1 1031 170 47 12 chr17 50044591 50044761 -35393719 - Charlie1a DNA MER1_type -1275 180 5 2350 73 0 17 chr17 50044965 50045266 -35393214 - AluSx SINE Alu -16 296 1 2391 92 3 0 chr17 50045629 50045934 -35392546 - AluSp SINE Alu -7 306 1 254 333 116 39 chr17 50046501 50046686 -35391794 - L2 LINE L2 -2 3311 3099 2364 74 0 7 chr17 50046686 50046983 -35391497 - AluY SINE Alu -16 295 1 254 333 116 39 chr17 50046983 50047055 -35391425 - L2 LINE L2 -214 3099 3034 1352 260 183 40 chr17 50047055 50048030 -35390450 - L2 LINE L2 -11 3302 2183 240 318 144 42 chr17 50048033 50048366 -35390114 - L2 LINE L2 -640 2674 2308 251 355 101 0 chr17 50048525 50048694 -35389786 + L2 LINE L2 2791 2976 -338 467 214 11 96 chr17 50049278 50049302 -35389178 - HAL1b LINE L1 0 1348 1325 729 257 133 38 chr17 50049302 50049665 -35388815 - L1ME4a LINE L1 -3 6118 5791 2296 95 0 10 chr17 50049665 50049969 -35388511 + AluSc SINE Alu 1 301 -8 2247 106 0 0 chr17 50049969 50050262 -35388218 + AluSg SINE Alu 1 293 -17 729 257 133 38 chr17 50050262 50050349 -35388131 - L1ME4a LINE L1 -329 5792 1186 2413 57 0 48 chr17 50050451 50050766 -35387714 - AluY SINE Alu -11 300 1 2396 82 0 3 chr17 50051554 50051847 -35386633 + AluSp SINE Alu 1 292 -21 2513 60 0 0 chr17 50052133 50052435 -35386045 - AluY SINE Alu -8 303 2 1822 139 4 4 chr17 50052851 50053131 -35385349 - AluSx SINE Alu 0 312 33 180 111 0 0 chr17 50053143 50053170 -35385310 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 207 265 0 0 chr17 50053200 50053249 -35385231 - L2 LINE L2 -4 3309 3261 638 239 0 8 chr17 50053273 50053403 -35385077 + FLAM_A SINE Alu 1 129 -4 237 152 63 13 chr17 50053798 50053877 -35384603 + (TA)n Simple_repeat Simple_repeat 1 83 0 24 32 0 0 chr17 50054225 50054256 -35384224 + AT_rich Low_complexity Low_complexity 1 31 0 237 197 61 15 chr17 50054492 50054558 -35383922 - MIR3 SINE MIR -12 196 128 1218 157 129 5 chr17 50055393 50055603 -35382877 - MER46A DNA MER2_type 0 236 1 2205 106 14 0 chr17 50055637 50055929 -35382551 - AluSx SINE Alu -16 296 1 384 273 13 84 chr17 50056608 50056762 -35381718 + MIR3 SINE MIR 35 177 -31 224 293 0 40 chr17 50056782 50056857 -35381623 - L2 LINE L2 0 3272 3201 2323 94 0 0 chr17 50057081 50057368 -35381112 - AluSx SINE Alu -25 287 1 2307 88 3 3 chr17 50057475 50057772 -35380708 + AluSp SINE Alu 1 297 -16 2466 59 10 0 chr17 50057811 50058115 -35380365 - AluY SINE Alu -4 307 1 2116 106 7 0 chr17 50058117 50058410 -35380070 - AluSq SINE Alu -18 295 1 2493 54 3 0 chr17 50058609 50058904 -35379576 + AluY SINE Alu 1 296 -15 775 299 229 9 chr17 50059188 50059650 -35378830 - L2 LINE L2 -337 2977 2414 2271 110 0 22 chr17 50059885 50060204 -35378276 + AluSx SINE Alu 1 312 0 1906 119 0 71 chr17 50060322 50060658 -35377822 - AluSx SINE Alu 0 312 1 275 302 99 13 chr17 50060818 50061009 -35377471 + MIR SINE MIR 30 231 -31 1643 99 170 8 chr17 50061131 50061384 -35377096 - AluSg1 SINE Alu -15 294 1 2094 122 20 10 chr17 50062071 50062374 -35376106 + AluSg SINE Alu 1 306 -4 213 39 0 0 chr17 50062824 50062850 -35375630 + (TATG)n Simple_repeat Simple_repeat 1 26 0 228 214 0 0 chr17 50062891 50062947 -35375533 + (TA)n Simple_repeat Simple_repeat 1 56 0 289 208 72 61 chr17 50062993 50063182 -35375298 - L1MC/D LINE L1 -333 5829 5659 975 114 0 0 chr17 50063459 50063582 -35374898 - FLAM_C SINE Alu -10 123 1 2277 105 7 0 chr17 50063713 50064017 -35374463 - AluSx SINE Alu -6 306 1 662 88 0 0 chr17 50065161 50065241 -35373239 - AluSx SINE Alu -17 292 213 896 126 0 8 chr17 50065242 50065369 -35373111 - AluSx SINE Alu -155 157 32 298 277 26 59 chr17 50065482 50065611 -35372869 - L1MC/D LINE L1 -714 5586 5488 2179 101 0 13 chr17 50065628 50065926 -35372554 - AluSx SINE Alu -18 294 1 970 285 94 29 chr17 50066162 50066375 -35372105 - L2 LINE L2 -2 3311 3113 2439 100 0 0 chr17 50066375 50066685 -35371795 - AluSx SINE Alu -2 310 1 970 285 94 29 chr17 50066685 50067031 -35371449 - L2 LINE L2 -200 3113 2710 2176 117 0 10 chr17 50067400 50067698 -35370782 - AluSx SINE Alu -17 295 1 1460 213 101 117 chr17 50067704 50068408 -35370072 - L1ME3A LINE L1 -8 6162 5470 311 214 146 11 chr17 50068559 50068648 -35369832 + L2 LINE L2 3168 3268 -4 1316 125 0 5 chr17 50068692 50068876 -35369604 - AluSq SINE Alu -70 243 61 2163 100 14 3 chr17 50069069 50069358 -35369122 - AluSc SINE Alu -17 292 1 657 163 259 15 chr17 50069656 50069791 -35368689 + FAM SINE Alu 1 168 -7 2200 113 0 3 chr17 50070015 50070306 -35368174 + AluSx SINE Alu 1 290 -22 1349 147 11 82 chr17 50070413 50070692 -35367788 - AluSx SINE Alu -10 302 44 2006 165 3 0 chr17 50071368 50071677 -35366803 + AluJb SINE Alu 1 310 -2 2363 100 3 0 chr17 50071732 50072033 -35366447 + AluSx SINE Alu 1 302 -10 1958 111 82 0 chr17 50074896 50075176 -35363304 + AluSq SINE Alu 1 303 -10 762 239 154 52 chr17 50075586 50075916 -35362564 - L2 LINE L2 -5 3308 2945 235 273 73 9 chr17 50076164 50076274 -35362206 - L1MC4a LINE L1 -1634 6174 6058 1405 228 141 21 chr17 50076362 50076844 -35361636 - L1MC4a LINE L1 -1977 5831 5292 775 207 0 0 chr17 50076915 50077036 -35361444 + FLAM_C SINE Alu 2 122 -21 22 0 0 0 chr17 50077036 50077058 -35361422 + AT_rich Low_complexity Low_complexity 1 22 0 380 182 39 0 chr17 50077686 50077763 -35360717 + MER116 DNA Mariner 1 80 0 2232 105 7 0 chr17 50078408 50078704 -35359776 - AluSg SINE Alu -12 298 1 1052 141 170 24 chr17 50078910 50079116 -35359364 - MER46A DNA MER2_type 0 236 1 2389 72 7 0 chr17 50080517 50080809 -35357671 + AluY SINE Alu 1 294 -17 1940 114 4 22 chr17 50080980 50081253 -35357227 - AluSx SINE Alu -44 268 1 311 302 70 33 chr17 50081948 50082033 -35356447 - L1ME3A LINE L1 -281 5889 5809 2353 95 3 0 chr17 50082033 50082339 -35356141 - AluSp SINE Alu -6 307 1 311 302 70 33 chr17 50082339 50082520 -35355960 - L1ME3A LINE L1 -361 5809 5646 640 131 138 0 chr17 50082530 50082660 -35355820 + MER5A DNA MER1_type 40 187 -2 22 35 0 0 chr17 50082754 50082783 -35355697 + AT_rich Low_complexity Low_complexity 1 29 0 1887 155 0 16 chr17 50082892 50083196 -35355284 + AluJb SINE Alu 1 299 -13 1287 209 35 3 chr17 50083196 50083301 -35355179 - L1MA9 LINE L1 -39 6273 6173 378 107 0 0 chr17 50083301 50083357 -35355123 + (TG)n Simple_repeat Simple_repeat 2 57 0 1287 209 35 3 chr17 50083357 50083534 -35354946 - L1MA9 LINE L1 -139 6173 5982 2202 91 17 7 chr17 50084358 50084655 -35353825 + AluSp SINE Alu 1 300 -13 662 174 34 27 chr17 50085760 50085909 -35352571 + L2 LINE L2 3160 3309 -4 748 205 35 23 chr17 50086007 50086178 -35352302 - Charlie8 DNA MER1_type -2154 263 91 1972 120 64 0 chr17 50087179 50087462 -35351018 - AluSx SINE Alu -11 301 1 2330 93 0 34 chr17 50087468 50087789 -35350691 - AluSq SINE Alu -3 310 1 1878 164 31 3 chr17 50087841 50088133 -35350347 + AluJb SINE Alu 1 300 -12 185 226 36 95 chr17 50089474 50089558 -35348922 + L3b LINE CR1 1224 1302 -281 2452 110 0 0 chr17 50089714 50090024 -35348456 - AluSx SINE Alu -2 310 1 281 167 0 0 chr17 50091552 50091594 -35346886 - 5S rRNA rRNA -79 42 1 181 367 6 57 chr17 50091685 50091843 -35346637 - MIR SINE MIR -50 212 63 890 209 0 6 chr17 50091987 50092175 -35346305 + FAM SINE Alu 1 51 0 294 150 33 0 chr17 50092449 50092509 -35345971 - FAM SINE Alu -4 175 114 1925 127 0 35 chr17 50092515 50092799 -35345681 + AluJo SINE Alu 13 286 -26 378 0 0 0 chr17 50092821 50092863 -35345617 + (CA)n Simple_repeat Simple_repeat 2 43 0 455 225 99 25 chr17 50093240 50093472 -35345008 - L1ME3A LINE L1 -225 5945 5687 25 31 0 0 chr17 50094373 50094405 -35344075 + AT_rich Low_complexity Low_complexity 1 32 0 1910 165 3 7 chr17 50095482 50095779 -35342701 + AluJb SINE Alu 1 296 -16 2334 101 0 0 chr17 50097150 50097448 -35341032 + AluSx SINE Alu 4 301 -11 211 305 135 46 chr17 50097961 50098243 -35340237 + L2 LINE L2 1931 2237 -1077 283 287 8 80 chr17 50098314 50098457 -35340023 - MIR SINE MIR -69 193 69 2193 121 0 19 chr17 50098457 50098764 -35339716 + AluSx SINE Alu 1 301 -11 283 287 8 80 chr17 50098764 50098793 -35339687 - MIR SINE MIR -193 69 39 694 179 104 0 chr17 50099099 50099233 -35339247 - MER106B DNA MER1_type -910 149 2 573 269 8 0 chr17 50100503 50100633 -35337847 - MER94 DNA DNA 0 134 4 2199 117 16 7 chr17 50100870 50101177 -35337303 + AluSx SINE Alu 1 310 -2 1870 152 13 26 chr17 50101216 50101526 -35336954 + AluJo SINE Alu 7 312 0 905 192 9 64 chr17 50101528 50101647 -35336833 - MER2 DNA MER2_type -138 207 83 2393 105 0 3 chr17 50101647 50101960 -35336520 - AluSq SINE Alu -1 312 1 2245 122 0 0 chr17 50101962 50102258 -35336222 - AluSx SINE Alu -16 296 1 905 192 9 64 chr17 50102258 50102354 -35336126 - MER2 DNA MER2_type -263 82 1 225 243 0 57 chr17 50102480 50102550 -35335930 - HsTC2 DNA Tc2 -1831 67 2 446 252 21 21 chr17 50102632 50102775 -35335705 + MER103 DNA DNA 22 164 -2 195 83 42 21 chr17 50106299 50106347 -35332133 + (TAA)n Simple_repeat Simple_repeat 2 50 0 300 282 174 20 chr17 50106640 50106835 -35331645 - MIR SINE MIR -18 244 20 246 242 0 0 chr17 50108137 50108199 -35330281 + A-rich Low_complexity Low_complexity 1 62 0 27 29 0 0 chr17 50108338 50108372 -35330108 + AT_rich Low_complexity Low_complexity 1 34 0 301 282 34 87 chr17 50109300 50109449 -35329031 - MIR SINE MIR -56 206 66 2420 90 7 0 chr17 50111640 50111939 -35326541 + AluSg SINE Alu 1 301 -9 261 308 0 1 chr17 50112025 50112099 -35326381 - MIR SINE MIR -61 147 81 377 310 172 8 chr17 50112107 50112421 -35326059 - L2 LINE L2 -1 3271 1746 2489 87 3 0 chr17 50112635 50112947 -35325533 - AluSp SINE Alu 0 313 1 906 188 94 2 chr17 50113080 50113392 -35325088 + MER63 DNA MER1_type 676 1062 0 189 0 0 0 chr17 50113437 50113458 -35325022 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1868 130 18 0 chr17 50113460 50113736 -35324744 - AluSx SINE Alu -31 281 1 1950 153 7 20 chr17 50113765 50114066 -35324414 + AluJo SINE Alu 1 297 -15 2227 117 0 3 chr17 50114221 50114519 -35323961 - AluSg SINE Alu -13 297 1 1508 282 203 29 chr17 50114823 50116473 -35322007 - L2 LINE L2 -29 3284 1339 373 236 226 5 chr17 50116546 50116730 -35321750 + MIR SINE MIR 22 251 -11 2419 77 3 0 chr17 50117185 50117482 -35320998 + AluSp SINE Alu 1 298 -15 741 174 16 0 chr17 50117490 50117611 -35320869 + FLAM_A SINE Alu 1 123 -10 726 275 35 0 chr17 50119188 50119359 -35319121 - MIR SINE MIR -81 181 5 2492 87 0 0 chr17 50120180 50120490 -35317990 - AluSg SINE Alu 0 310 1 2129 129 0 38 chr17 50121282 50121599 -35316881 + AluSx SINE Alu 1 305 -7 246 181 106 4 chr17 50122480 50122552 -35315928 - MIR SINE MIR -63 145 74 478 177 65 65 chr17 50122556 50122617 -35315863 - MLT1J LTR MaLR -6 505 445 2530 60 0 7 chr17 50122617 50122915 -35315565 + AluY SINE Alu 1 296 -15 478 177 65 65 chr17 50122915 50122977 -35315503 - MLT1J LTR MaLR -65 446 382 566 143 44 0 chr17 50122977 50123068 -35315412 - AluSg/x SINE Alu -13 299 205 1528 106 23 5 chr17 50123120 50123338 -35315142 - AluSq SINE Alu -91 222 1 1151 264 69 34 chr17 50123338 50123717 -35314763 - MLT1J LTR MaLR -119 392 1 380 310 75 35 chr17 50123852 50124026 -35314454 - MIR SINE MIR -59 203 23 192 174 22 43 chr17 50124984 50125030 -35313450 - L2 LINE L2 -89 3183 3139 297 275 22 80 chr17 50126658 50126691 -35311789 - MIR3 SINE MIR -20 188 155 854 168 92 6 chr17 50126691 50126864 -35311616 + MER5A DNA MER1_type 2 189 0 297 275 22 80 chr17 50126864 50126968 -35311512 - MIR3 SINE MIR -53 155 59 184 380 54 39 chr17 50129492 50129621 -35308859 - L2 LINE L2 -92 3180 3050 291 148 56 0 chr17 50129893 50129947 -35308533 - MIR SINE MIR -96 166 110 209 91 0 68 chr17 50130873 50130938 -35307542 + (GGGA)n Simple_repeat Simple_repeat 1 60 0 33 90 0 0 chr17 50131957 50132046 -35306434 + GC_rich Low_complexity Low_complexity 1 89 0 198 0 0 0 chr17 50132099 50132121 -35306359 + (CGG)n Simple_repeat Simple_repeat 1 22 0 187 368 37 7 chr17 50132400 50132536 -35305944 - L3b LINE CR1 -166 1417 1278 398 210 118 34 chr17 50133478 50133597 -35304883 + MIR3 SINE MIR 9 137 -71 457 307 89 82 chr17 50133797 50134224 -35304256 - L2 LINE L2 -3 3269 2840 225 269 64 103 chr17 50134794 50134950 -35303530 - MER5A DNA MER1_type -4 185 36 350 307 90 16 chr17 50135657 50135846 -35302634 - L2 LINE L2 -160 3112 2910 587 310 147 37 chr17 50135877 50136672 -35301808 - L2 LINE L2 0 3313 2435 290 296 89 20 chr17 50137095 50137250 -35301230 + MIR3 SINE MIR 10 172 -59 24 0 0 0 chr17 50137638 50137662 -35300818 + GC_rich Low_complexity Low_complexity 1 24 0 2441 75 0 0 chr17 50137757 50138062 -35300418 + AluSx SINE Alu 1 305 -7 898 94 0 51 chr17 50138088 50138226 -35300254 + AluJ SINE Alu 1 131 -181 351 360 29 14 chr17 50138227 50138366 -35300114 - L1MC4 LINE L1 -1350 6692 6552 * 494 80 93 7 chr17 50138345 50138366 -35300114 + (TA)n Simple_repeat Simple_repeat 1 19 -529 23 0 0 0 chr17 50138366 50138389 -35300091 + AT_rich Low_complexity Low_complexity 1 23 0 494 80 93 7 chr17 50138389 50138565 -35299915 + (TA)n Simple_repeat Simple_repeat 19 178 -370 326 216 27 72 chr17 50138565 50138676 -35299804 + L1MCa LINE L1 1958 2063 -4363 494 80 93 7 chr17 50138676 50138850 -35299630 + (TA)n Simple_repeat Simple_repeat 178 548 0 1254 124 0 16 chr17 50138855 50139040 -35299440 + AluJ SINE Alu 127 308 -4 520 224 333 0 chr17 50139082 50139256 -35299224 + MIR SINE MIR 31 262 0 207 316 178 26 chr17 50140674 50140826 -35297654 + L2 LINE L2 2584 2758 -556 501 230 37 30 chr17 50140887 50141022 -35297458 - MIR SINE MIR -88 174 39 542 224 6 60 chr17 50141145 50141328 -35297152 - MER113 DNA MER1_type? -304 217 45 509 288 153 53 chr17 50141428 50141821 -35296659 + L2 LINE L2 2841 3272 0 539 316 43 94 chr17 50142026 50142421 -35296059 + L1 LINE L1 4886 5260 -886 2225 84 16 16 chr17 50142438 50142747 -35295733 - AluSq SINE Alu -4 309 1 14202 106 33 53 chr17 50142845 50143181 -35295299 - Tigger1 DNA MER2_type 0 2418 2077 1951 136 0 33 chr17 50143181 50143342 -35295138 - AluJb SINE Alu -18 294 146 1711 54 49 0 chr17 50143342 50143546 -35294934 - AluY SINE Alu -15 296 83 1951 136 0 33 chr17 50143546 50143686 -35294794 - AluJb SINE Alu -166 146 3 14202 106 33 53 chr17 50143686 50143697 -35294783 - Tigger1 DNA MER2_type -341 2077 2067 2401 104 3 0 chr17 50143697 50144006 -35294474 - AluSx SINE Alu 0 312 3 14202 106 33 53 chr17 50144006 50144519 -35293961 - Tigger1 DNA MER2_type -351 2067 1545 2249 102 0 20 chr17 50144519 50144822 -35293658 - AluSq SINE Alu -16 297 1 14202 106 33 53 chr17 50144822 50144874 -35293606 - Tigger1 DNA MER2_type -873 1545 1493 1025 58 7 0 chr17 50144883 50145020 -35293460 + (TTCC)n Simple_repeat Simple_repeat 3 140 0 2193 101 24 0 chr17 50145020 50145297 -35293183 - AluSx SINE Alu -25 287 1 1543 205 45 3 chr17 50145297 50145585 -35292895 - AluJo SINE Alu -12 300 1 14202 106 33 53 chr17 50145585 50145664 -35292816 - Tigger1 DNA MER2_type -924 1494 1415 2308 94 3 13 chr17 50145664 50145971 -35292509 - AluSp SINE Alu -9 304 1 14202 106 33 53 chr17 50145971 50147244 -35291236 - Tigger1 DNA MER2_type -1003 1415 199 2220 138 3 0 chr17 50147244 50147555 -35290925 + AluSx SINE Alu 1 312 0 14202 106 33 53 chr17 50147555 50147748 -35290732 - Tigger1 DNA MER2_type -2219 199 4 2143 130 0 34 chr17 50147864 50148187 -35290293 + AluSx SINE Alu 1 312 0 3220 172 81 33 chr17 50148201 50148907 -35289573 - L1MC3 LINE L1 0 7785 7033 2200 123 0 0 chr17 50148907 50149199 -35289281 - AluSx SINE Alu -20 292 1 3220 172 81 33 chr17 50149199 50149305 -35289175 - L1MC3 LINE L1 -752 7033 6934 180 0 0 0 chr17 50149305 50149325 -35289155 + (TG)n Simple_repeat Simple_repeat 1 20 0 1797 181 3 3 chr17 50149529 50149832 -35288648 + AluJb SINE Alu 1 303 -9 196 154 39 0 chr17 50149937 50149989 -35288491 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 375 337 45 17 chr17 50149989 50150167 -35288313 + L2 LINE L2 2628 2810 -504 302 257 97 113 chr17 50150160 50150471 -35288009 + L2 LINE L2 3003 3308 -5 * 183 270 68 14 chr17 50151062 50151136 -35287344 + MIR3 SINE MIR 106 183 -25 351 288 113 34 chr17 50153117 50153294 -35285186 + MIR SINE MIR 28 218 -44 250 248 124 9 chr17 50153309 50153414 -35285066 - MIR SINE MIR -33 229 113 239 268 18 0 chr17 50153399 50153455 -35285025 - L2 LINE L2 -79 3193 3137 * 334 322 54 29 chr17 50153839 50154081 -35284399 - L2 LINE L2 -181 3091 2844 423 0 0 0 chr17 50154681 50154728 -35283752 + (TG)n Simple_repeat Simple_repeat 1 47 0 2100 125 0 14 chr17 50156512 50156647 -35281833 + AluSx SINE Alu 1 136 -167 2253 114 10 0 chr17 50156647 50156954 -35281526 + AluSp SINE Alu 1 310 -3 2100 125 0 14 chr17 50156954 50157125 -35281355 + AluSx SINE Alu 136 303 0 190 340 83 13 chr17 50158102 50158258 -35280222 + L2 LINE L2 2638 2804 -510 220 298 33 53 chr17 50158543 50158694 -35279786 + L2 LINE L2 3078 3225 -88 289 329 53 57 chr17 50159962 50160190 -35278290 + L2 LINE L2 3024 3250 -22 1576 180 123 74 chr17 50160749 50161325 -35277155 + MLT1E1 LTR MaLR 2 624 -30 200 256 143 12 chr17 50162656 50162790 -35275690 + MER5B DNA MER1_type 8 142 -36 2037 135 135 8 chr17 50163532 50163911 -35274569 + MSTA LTR MaLR 2 428 0 1404 268 17 12 chr17 50163937 50164348 -35274132 + L1MEc LINE L1 43 455 -5941 1060 144 21 5 chr17 50164323 50164511 -35273969 + L1MC3 LINE L1 4826 5016 -1199 * 2436 85 3 0 chr17 50164523 50164817 -35273663 + AluSq SINE Alu 5 299 -14 1080 133 0 7 chr17 50164817 50165011 -35273469 + AluSg/x SINE Alu 134 326 0 6824 151 29 64 chr17 50165023 50165871 -35272609 + L1MC3 LINE L1 5036 5911 -304 2334 100 0 3 chr17 50165871 50166172 -35272308 + AluSg SINE Alu 1 300 -10 6824 151 29 64 chr17 50166172 50166763 -35271717 + L1MC3 LINE L1 5911 6521 306 1966 141 7 17 chr17 50166763 50167089 -35271391 + AluSx SINE Alu 1 312 0 6824 151 29 64 chr17 50167089 50167273 -35271207 + L1MC3 LINE L1 6521 6710 495 1871 191 0 7 chr17 50167273 50167576 -35270904 - AluJb SINE Alu -11 301 1 6824 151 29 64 chr17 50167576 50167675 -35270805 + L1MC3 LINE L1 6710 5321 -894 381 43 0 0 chr17 50167675 50167722 -35270758 + (TG)n Simple_repeat Simple_repeat 2 48 0 6824 151 29 64 chr17 50167722 50167854 -35270626 + L1MC3 LINE L1 5320 5455 -760 2300 96 6 13 chr17 50167855 50168167 -35270313 + AluSg SINE Alu 1 310 0 6321 127 75 40 chr17 50168189 50170016 -35268464 + Tigger1 DNA MER2_type 1 1975 -443 25 0 0 0 chr17 50170191 50170216 -35268264 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr17 50170434 50170469 -35268011 + AT_rich Low_complexity Low_complexity 1 35 0 1600 131 69 0 chr17 50170977 50171252 -35267228 + Tigger1 DNA MER2_type 1964 2257 -161 1845 151 7 26 chr17 50171267 50171572 -35266908 - AluSx SINE Alu -13 299 1 517 227 59 48 chr17 50171572 50171609 -35266871 + L1ME1 LINE L1 5914 5949 -363 2383 80 3 7 chr17 50171609 50171910 -35266570 + AluY SINE Alu 1 300 -11 517 227 59 48 chr17 50171910 50172086 -35266394 + L1ME1 LINE L1 5949 6275 -37 2434 47 0 0 chr17 50172086 50172364 -35266116 + AluY SINE Alu 2 279 -32 216 0 0 0 chr17 50172469 50172493 -35265987 + (A)n Simple_repeat Simple_repeat 1 24 0 1816 149 11 25 chr17 50172494 50172776 -35265704 - AluJb SINE Alu -34 278 1 444 273 75 52 chr17 50172814 50173081 -35265399 - HAL1 LINE L1 -6 2501 2229 2257 126 3 0 chr17 50173196 50173506 -35264974 - AluSq SINE Alu -2 311 1 233 200 20 0 chr17 50173663 50173713 -35264767 - HAL1 LINE L1 -362 2145 2095 367 257 37 9 chr17 50173729 50173838 -35264642 - MIR SINE MIR -55 153 42 1222 195 0 25 chr17 50174003 50174216 -35264264 + AluJb SINE Alu 83 291 -21 2127 123 0 37 chr17 50174216 50174540 -35263940 + AluSx SINE Alu 1 312 0 1222 195 0 25 chr17 50174540 50174562 -35263918 + AluJb SINE Alu 291 312 0 2184 235 8 4 chr17 50174580 50175087 -35263393 + L1MC1 LINE L1 3444 3952 -2194 2288 114 0 0 chr17 50175101 50175400 -35263080 + AluSg SINE Alu 1 299 -11 5739 151 36 35 chr17 50175400 50175645 -35262835 + L1MC1 LINE L1 4750 4993 -1340 2084 111 0 11 chr17 50175645 50175915 -35262565 + AluSx SINE Alu 14 280 -32 219 69 0 0 chr17 50175916 50175945 -35262535 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5739 151 36 35 chr17 50175945 50176285 -35262195 + L1MC1 LINE L1 4993 5331 -1002 2335 105 0 13 chr17 50176285 50176591 -35261889 + AluSg SINE Alu 1 302 -8 5739 151 36 35 chr17 50176591 50177583 -35260897 + L1MC1 LINE L1 5326 6326 -2 1553 166 70 32 chr17 50177583 50177867 -35260613 + AluJo SINE Alu 1 295 -17 184 390 68 0 chr17 50177976 50178094 -35260386 - L2 LINE L2 -962 2352 2227 2352 123 0 0 chr17 50178173 50178483 -35259997 + AluSx SINE Alu 1 310 -2 2175 99 44 0 chr17 50180005 50180299 -35258181 - AluSq SINE Alu -6 307 1 396 263 43 2 chr17 50180694 50180813 -35257667 + MIR3 SINE MIR 50 171 -50 607 250 49 27 chr17 50181871 50182055 -35256425 - MIR SINE MIR -47 215 28 2007 163 0 3 chr17 50182058 50182358 -35256122 - AluSx SINE Alu -13 299 1 236 194 15 60 chr17 50183034 50183101 -35255379 + C-rich Low_complexity Low_complexity 1 64 0 288 281 126 15 chr17 50183174 50183309 -35255171 + MIR SINE MIR 63 212 -50 2077 140 7 3 chr17 50184437 50184730 -35253750 - AluSx SINE Alu -8 304 11 214 244 37 24 chr17 50184877 50184959 -35253521 + L2 LINE L2 1752 1834 -1480 420 198 47 0 chr17 50185308 50185394 -35253086 - Tigger7 DNA MER2_type -8 2579 2490 * 1334 188 27 15 chr17 50185393 50185654 -35252826 - Tigger7 DNA MER2_type -466 267 4 251 256 138 10 chr17 50185656 50185851 -35252629 + L2 LINE L2 2281 2500 -814 233 289 189 17 chr17 50186322 50186502 -35251978 + MLT1K LTR MaLR 87 297 -291 408 217 100 61 chr17 50186562 50186742 -35251738 + MLT1K LTR MaLR 396 582 -6 819 124 31 176 chr17 50188299 50188417 -35250063 + MER33 DNA MER1_type 49 183 -2402 697 146 0 31 chr17 50188417 50188547 -35249933 + FLAM_C SINE Alu 2 127 -6 819 124 31 176 chr17 50188547 50188751 -35249729 + MER33 DNA MER1_type 183 324 0 439 280 206 21 chr17 50188766 50189155 -35249325 - L2 LINE L2 0 3313 2853 186 304 98 18 chr17 50189207 50189319 -35249161 + L2 LINE L2 2920 3040 -232 872 148 0 0 chr17 50189341 50189463 -35249017 + FLAM_C SINE Alu 1 122 -21 216 0 0 0 chr17 50189463 50189487 -35248993 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1832 132 57 88 chr17 50189623 50189690 -35248790 - THE1C LTR MaLR 0 375 307 2275 129 0 0 chr17 50189690 50189992 -35248488 - AluSx SINE Alu -10 302 1 1832 132 57 88 chr17 50189992 50190140 -35248340 - THE1C LTR MaLR -68 307 156 2159 116 3 0 chr17 50190140 50190451 -35248029 - AluSx SINE Alu 0 312 1 1832 132 57 88 chr17 50190451 50190621 -35247859 - THE1C LTR MaLR -219 156 1 459 321 138 36 chr17 50190683 50190863 -35247617 + L2 LINE L2 2495 2655 -617 1951 142 0 19 chr17 50190863 50191181 -35247299 + AluJb SINE Alu 1 312 0 459 321 138 36 chr17 50191181 50191632 -35246848 + L2 LINE L2 2655 3194 -78 207 69 0 0 chr17 50193701 50193730 -35244750 + (TG)n Simple_repeat Simple_repeat 2 30 0 381 320 27 7 chr17 50194098 50194245 -35244235 + MIR3 SINE MIR 52 201 -7 459 271 75 38 chr17 50196130 50196497 -35241983 + L1MC4a LINE L1 5619 5986 -135 252 59 0 0 chr17 50196886 50196920 -35241560 + (CAGGA)n Simple_repeat Simple_repeat 1 34 0 503 357 33 0 chr17 50197521 50197703 -35240777 + MIR3 SINE MIR 21 208 0 207 292 124 0 chr17 50200520 50200609 -35237871 - MIR SINE MIR -65 143 44 308 306 0 0 chr17 50202110 50202182 -35236298 - MER91A DNA MER1_type -111 85 14 2131 141 0 0 chr17 50202700 50203012 -35235468 + AluSx SINE Alu 1 312 0 542 265 115 15 chr17 50203127 50203327 -35235153 + MIR SINE MIR 35 254 -8 271 265 15 0 chr17 50203720 50203788 -35234692 + GA-rich Low_complexity Low_complexity 1 69 0 1843 183 0 16 chr17 50204561 50204878 -35233602 + AluSx SINE Alu 1 312 0 543 31 0 0 chr17 50204907 50204972 -35233508 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 203 179 0 71 chr17 50205511 50205567 -35232913 + C-rich Low_complexity Low_complexity 3 54 0 580 258 103 0 chr17 50206058 50206213 -35232267 + MER91A DNA MER1_type 1 171 -25 322 327 117 52 chr17 50207170 50207418 -35231062 + L2 LINE L2 2990 3253 -19 2249 98 0 0 chr17 50207898 50208226 -35230254 + AluY SINE Alu 1 311 0 240 263 0 0 chr17 50208334 50208391 -35230089 + MIR SINE MIR 142 198 -64 534 285 79 7 chr17 50208662 50208864 -35229616 + MIR SINE MIR 48 260 -2 437 362 53 8 chr17 50209592 50209838 -35228642 + MIR SINE MIR 3 259 -3 466 244 25 8 chr17 50210677 50210796 -35227684 + MIR SINE MIR 20 140 -68 208 261 17 35 chr17 50211610 50211725 -35226755 + CT-rich Low_complexity Low_complexity 5 117 0 23 86 0 0 chr17 50212528 50212586 -35225894 + GC_rich Low_complexity Low_complexity 1 58 0 238 389 0 0 chr17 50213263 50213402 -35225078 + (CA)n Simple_repeat Simple_repeat 2 140 0 1998 106 0 4 chr17 50213883 50214184 -35224296 + AluSx SINE Alu 14 313 0 402 251 131 47 chr17 50214868 50215047 -35223433 + MIR3 SINE MIR 4 196 -54 410 246 59 25 chr17 50215084 50215202 -35223278 - L2 LINE L2 -3 3310 3189 2065 113 3 0 chr17 50215225 50215538 -35222942 - AluSx SINE Alu 0 314 1 306 237 0 0 chr17 50215669 50215766 -35222714 + (CCA)n Simple_repeat Simple_repeat 1 97 0 320 302 9 17 chr17 50215768 50215884 -35222596 + (CACCAT)n Simple_repeat Simple_repeat 5 119 0 444 309 7 15 chr17 50216700 50216836 -35221644 - MIR SINE MIR -66 196 62 242 113 0 19 chr17 50218160 50218213 -35220267 + (TTTG)n Simple_repeat Simple_repeat 1 52 0 1832 151 0 4 chr17 50218221 50218499 -35219981 - AluJo SINE Alu -23 289 13 346 347 61 0 chr17 50218577 50218802 -35219678 + MIR SINE MIR 21 262 0 2138 92 7 0 chr17 50219578 50219901 -35218579 + AluY SINE Alu 1 325 0 246 284 41 36 chr17 50219958 50220096 -35218384 - MIR3 SINE MIR -26 182 41 193 305 57 38 chr17 50220111 50220216 -35218264 + MIR SINE MIR 42 148 -60 210 384 45 0 chr17 50221701 50221813 -35216667 + L2 LINE L2 2746 2862 -452 401 242 16 65 chr17 50223142 50223328 -35215152 + GA-rich Low_complexity Low_complexity 1 177 0 242 248 9 0 chr17 50223696 50223805 -35214675 + GA-rich Low_complexity Low_complexity 1 110 0 553 255 26 63 chr17 50223862 50224116 -35214364 + MIR SINE MIR 23 262 0 218 196 0 0 chr17 50224118 50224164 -35214316 + (TAG)n Simple_repeat Simple_repeat 1 46 0 395 299 81 52 chr17 50225248 50225519 -35212961 + L2 LINE L2 2994 3272 0 2335 95 0 0 chr17 50225735 50226041 -35212439 + AluSc SINE Alu 1 306 -3 534 280 64 22 chr17 50226724 50227131 -35211349 + MLT1K LTR MaLR 125 588 0 294 308 103 0 chr17 50227131 50227238 -35211242 - L2 LINE L2 -2 3270 3153 1384 179 35 4 chr17 50227359 50227616 -35210864 + AluJo SINE Alu 2 266 -46 238 314 71 0 chr17 50227735 50227805 -35210675 + L2 LINE L2 3238 3312 -1 419 277 31 24 chr17 50228348 50228510 -35209970 + MIR SINE MIR 17 181 -63 299 337 11 28 chr17 50228874 50229055 -35209425 + CT-rich Low_complexity Low_complexity 2 179 0 307 250 10 42 chr17 50229088 50229184 -35209296 + CT-rich Low_complexity Low_complexity 2 94 0 341 318 105 36 chr17 50230374 50230647 -35207833 - L2 LINE L2 -114 3158 2860 351 0 0 0 chr17 50230647 50230686 -35207794 + (TG)n Simple_repeat Simple_repeat 1 39 0 341 318 105 36 chr17 50230686 50230717 -35207763 - L2 LINE L2 -412 2860 2833 430 272 38 43 chr17 50230720 50230767 -35207713 - MIR SINE MIR -1 261 215 2157 129 0 0 chr17 50230767 50231077 -35207403 - AluSq SINE Alu -3 310 1 430 272 38 43 chr17 50231077 50231213 -35207267 - MIR SINE MIR -47 215 79 230 316 26 0 chr17 50231649 50231725 -35206755 + MIR SINE MIR 4 81 -181 2279 121 96 25 chr17 50231778 50232175 -35206305 + MSTA LTR MaLR 1 425 -3 1571 175 45 7 chr17 50232175 50232444 -35206036 - AluJb SINE Alu -33 279 1 191 237 9 123 chr17 50232621 50232735 -35205745 + MER5A DNA MER1_type 87 187 -2 2429 190 96 14 chr17 50232875 50233376 -35205104 - MLT1F LTR MaLR 0 542 1 186 121 0 30 chr17 50233388 50233421 -35205059 - MIR SINE MIR -112 150 119 21 0 0 0 chr17 50234288 50234309 -35204171 + AT_rich Low_complexity Low_complexity 1 21 0 232 388 0 0 chr17 50234469 50234549 -35203931 - MIR SINE MIR -63 145 66 1194 305 55 44 chr17 50235664 50236398 -35202082 - L2 LINE L2 -144 3169 2415 197 208 132 0 chr17 50236954 50237007 -35201473 - MIR SINE MIR -73 135 76 485 296 20 7 chr17 50238369 50238521 -35199959 - MIR SINE MIR -105 157 4 * 740 355 75 48 chr17 50238521 50239028 -35199452 + L2 LINE L2 2250 2742 -530 2032 135 0 0 chr17 50239028 50239325 -35199155 + AluSx SINE Alu 11 307 -5 740 355 75 48 chr17 50239325 50239806 -35198674 + L2 LINE L2 2742 3270 -2 657 213 112 12 chr17 50239977 50240146 -35198334 + MIR3 SINE MIR 18 203 -5 371 279 79 36 chr17 50240678 50240818 -35197662 + MIR3 SINE MIR 45 190 -18 187 345 83 0 chr17 50241942 50242026 -35196454 + MIR SINE MIR 117 207 -55 255 125 0 0 chr17 50242352 50242392 -35196088 + (CA)n Simple_repeat Simple_repeat 2 41 0 960 136 0 0 chr17 50243026 50243173 -35195307 + AluJb SINE Alu 136 282 -30 2083 142 199 14 chr17 50243283 50243705 -35194775 + MLT1D LTR MaLR 3 502 -3 260 205 103 26 chr17 50243868 50243946 -35194534 - L2 LINE L2 -95 3218 3135 556 255 35 7 chr17 50244227 50244372 -35194108 + MIR SINE MIR 100 248 -14 380 339 33 64 chr17 50244350 50244738 -35193742 - L2 LINE L2 -198 3074 2693 * 1861 134 7 0 chr17 50244827 50245103 -35193377 - AluSx SINE Alu -2 310 33 322 207 314 7 chr17 50245158 50245298 -35193182 - MIR3 SINE MIR -7 201 19 2397 93 0 0 chr17 50245417 50245727 -35192753 + AluSg SINE Alu 1 310 0 349 242 20 59 chr17 50246627 50246780 -35191700 - MER103 DNA DNA -12 154 8 558 212 66 20 chr17 50247289 50247440 -35191040 + MIR SINE MIR 20 177 -85 292 295 93 39 chr17 50247530 50247659 -35190821 - L2 LINE L2 0 3313 3178 242 78 176 20 chr17 50247662 50247713 -35190767 - L2 LINE L2 -1 3271 3213 238 325 18 53 chr17 50247759 50247873 -35190607 - MIR SINE MIR -50 212 103 2170 99 0 19 chr17 50248851 50249163 -35189317 - AluSg SINE Alu -4 306 1 604 266 208 34 chr17 50249690 50250326 -35188154 + L2 LINE L2 2549 3306 -7 644 285 216 22 chr17 50251290 50251799 -35186681 + L2 LINE L2 2707 3305 -8 539 216 88 24 chr17 50253896 50254021 -35184459 + AluJb SINE Alu 114 246 -66 323 170 0 125 chr17 50254021 50254133 -35184347 + AluJb SINE Alu 204 301 -1 444 268 24 16 chr17 50254574 50254697 -35183783 + MIR SINE MIR 24 147 -61 493 137 11 11 chr17 50257336 50257431 -35181049 + GA-rich Low_complexity Low_complexity 2 96 0 1512 225 92 23 chr17 50257461 50257896 -35180584 - MLT2B2 LTR ERVL -50 465 1 810 195 58 131 chr17 50257988 50258051 -35180429 - MLT1B LTR MaLR 0 378 312 2272 112 0 0 chr17 50258051 50258363 -35180117 + AluSx SINE Alu 1 312 0 810 195 58 131 chr17 50258363 50258750 -35179730 - MLT1B LTR MaLR -66 312 9 217 246 0 43 chr17 50258850 50258919 -35179561 + C-rich Low_complexity Low_complexity 2 67 0 618 251 6 42 chr17 50259266 50259433 -35179047 - MER5B DNA MER1_type -14 164 4 630 171 126 60 chr17 50259447 50259620 -35178860 + MER5A DNA MER1_type 4 189 0 309 335 88 51 chr17 50260031 50260106 -35178374 + L2 LINE L2 2888 2959 -313 2217 108 0 0 chr17 50260106 50260411 -35178069 - AluSg SINE Alu -5 305 1 309 335 88 51 chr17 50260411 50260666 -35177814 + L2 LINE L2 2959 3230 -42 1019 255 12 4 chr17 50260689 50260940 -35177540 - MIR SINE MIR 0 262 10 519 224 110 131 chr17 50261198 50261435 -35177045 + MIR SINE MIR 31 262 0 461 295 86 45 chr17 50262420 50262664 -35175816 - MIR SINE MIR 0 262 9 1551 171 3 43 chr17 50262720 50262797 -35175683 + AluJo SINE Alu 1 80 -232 2002 88 64 0 chr17 50262797 50263080 -35175400 - AluY SINE Alu -10 301 1 1551 171 3 43 chr17 50263080 50263306 -35175174 + AluJo SINE Alu 80 292 -20 237 329 0 12 chr17 50263649 50263734 -35174746 - MARNA DNA Mariner -32 554 471 279 325 44 9 chr17 50264211 50264325 -35174155 - L2 LINE L2 -208 3064 2947 564 278 34 11 chr17 50264410 50264586 -35173894 + MIR SINE MIR 4 183 -79 324 310 192 8 chr17 50264848 50265093 -35173387 + L2 LINE L2 2488 2777 -537 201 370 41 27 chr17 50265109 50265255 -35173225 + L2 LINE L2 2910 3057 -215 1075 211 0 15 chr17 50266110 50266314 -35172166 - AluJo SINE Alu -111 201 1 189 197 0 0 chr17 50266361 50266422 -35172058 + (TA)n Simple_repeat Simple_repeat 1 61 0 829 159 8 0 chr17 50267197 50267329 -35171151 + FLAM_C SINE Alu 1 133 -10 218 333 92 8 chr17 50268503 50268623 -35169857 - L2 LINE L2 -5 3267 3138 2043 129 7 0 chr17 50268776 50269078 -35169402 - AluSx SINE Alu -8 304 1 770 231 43 0 chr17 50269451 50269637 -35168843 - MIR SINE MIR -5 257 64 180 0 0 0 chr17 50269640 50269660 -35168820 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2070 141 0 0 chr17 50269675 50269987 -35168493 + AluSx SINE Alu 1 312 0 857 452 7 21 chr17 50269987 50270266 -35168214 - AluJo SINE Alu -36 276 2 2137 118 0 0 chr17 50270268 50270564 -35167916 - AluSx SINE Alu -16 296 1 294 273 105 53 chr17 50271708 50272175 -35166305 + MLT1H LTR MaLR 1 542 0 1667 155 14 3 chr17 50272470 50272754 -35165726 - AluJb SINE Alu -25 287 1 396 232 28 122 chr17 50273023 50273088 -35165392 + MER103 DNA DNA 1 71 -95 1520 149 28 0 chr17 50273088 50273336 -35165144 + AluJo SINE Alu 51 305 -7 396 232 28 122 chr17 50273336 50273451 -35165029 + MER103 DNA DNA 71 164 -2 553 324 127 25 chr17 50273854 50274366 -35164114 - L2 LINE L2 -421 2893 2330 230 370 130 38 chr17 50274492 50274808 -35163672 - L2 LINE L2 -31 3241 2897 215 357 43 36 chr17 50274840 50274980 -35163500 + L2 LINE L2 3124 3264 -8 1834 106 12 0 chr17 50275489 50275743 -35162737 - AluSg SINE Alu -53 257 1 236 213 0 0 chr17 50276568 50276615 -35161865 - L2 LINE L2 -3 3310 3264 368 290 28 0 chr17 50277205 50277307 -35161173 + MIR SINE MIR 8 116 -92 224 234 0 0 chr17 50278248 50278295 -35160185 + (CTAGGG)n Simple_repeat Simple_repeat 6 52 0 181 300 64 82 chr17 50278423 50278643 -35159837 - L2 LINE L2 -13 3259 3044 2304 87 3 0 chr17 50278769 50279069 -35159411 - AluSq SINE Alu -8 305 5 1688 134 52 21 chr17 50279158 50279448 -35159032 - AluSx SINE Alu -5 307 9 198 0 0 0 chr17 50279515 50279537 -35158943 + (T)n Simple_repeat Simple_repeat 1 22 0 319 235 159 23 chr17 50280024 50280156 -35158324 + MIR SINE MIR 2 151 -111 2053 57 15 4 chr17 50280170 50280432 -35158048 - AluY SINE Alu -4 307 43 411 89 0 0 chr17 50280520 50280576 -35157904 + Alu SINE Alu 2 57 -256 1342 157 0 13 chr17 50280690 50280925 -35157555 + AluJo SINE Alu 81 312 0 239 241 17 0 chr17 50281000 50281058 -35157422 - L2 LINE L2 -14 3299 3241 805 240 19 34 chr17 50282026 50282234 -35156246 - MIR SINE MIR -22 240 36 535 200 159 18 chr17 50282376 50282546 -35155934 + MIR SINE MIR 36 229 -33 1687 166 7 32 chr17 50283067 50283375 -35155105 - AluJo SINE Alu -4 308 9 2187 105 3 0 chr17 50284693 50284987 -35153493 + AluSq SINE Alu 1 295 -18 186 133 0 0 chr17 50285141 50285171 -35153309 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 216 0 0 0 chr17 50285171 50285195 -35153285 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 2158 131 0 0 chr17 50285203 50285515 -35152965 + AluJb SINE Alu 1 312 0 262 250 0 0 chr17 50286451 50286507 -35151973 + GA-rich Low_complexity Low_complexity 2 57 0 269 378 0 6 chr17 50286735 50286915 -35151565 + (CA)n Simple_repeat Simple_repeat 1 179 0 187 152 0 0 chr17 50287307 50287340 -35151140 + MIR SINE MIR 116 148 -114 279 304 24 8 chr17 50288194 50288319 -35150161 + GA-rich Low_complexity Low_complexity 2 128 0 559 0 28 0 chr17 50288319 50288390 -35150090 + (GA)n Simple_repeat Simple_repeat 2 74 0 256 291 27 27 chr17 50289155 50289265 -35149215 - L3b LINE CR1 -131 1452 1343 632 315 70 5 chr17 50289494 50289707 -35148773 + MIR SINE MIR 35 261 -1 501 202 12 6 chr17 50289977 50290145 -35148335 + (TCCA)n Simple_repeat Simple_repeat 2 170 0 389 316 18 18 chr17 50290149 50290320 -35148160 + (CCCA)n Simple_repeat Simple_repeat 4 174 0 267 313 10 21 chr17 50290442 50290538 -35147942 + L3b LINE CR1 1274 1368 -215 471 330 43 11 chr17 50290870 50291055 -35147425 + MIR SINE MIR 36 226 -36 414 0 0 0 chr17 50291611 50291657 -35146823 + (CA)n Simple_repeat Simple_repeat 2 47 0 863 189 0 67 chr17 50293395 50293431 -35145049 - AluJo/FRAM SINE Alu -9 303 266 2189 97 0 23 chr17 50293431 50293731 -35144749 + AluSg SINE Alu 1 293 -17 863 189 0 67 chr17 50293731 50293874 -35144606 - AluJo/FRAM SINE Alu -46 266 136 564 238 40 26 chr17 50293887 50294038 -35144442 + MIR SINE MIR 110 262 0 2477 71 6 0 chr17 50295084 50295395 -35143085 - AluSp SINE Alu 0 313 1 717 153 0 0 chr17 50295527 50295638 -35142842 - FLAM_C SINE Alu -32 111 1 697 244 43 98 chr17 50295638 50295818 -35142662 - Zaphod DNA AcHobo -3258 773 585 2212 95 0 3 chr17 50295818 50296112 -35142368 + AluSg SINE Alu 1 293 -17 697 244 43 98 chr17 50296112 50296369 -35142111 - Zaphod DNA AcHobo -3446 585 360 350 197 0 0 chr17 50296372 50296438 -35142042 - L1MCa LINE L1 -6340 86 21 336 333 102 28 chr17 50296500 50296755 -35141725 - Zaphod DNA AcHobo -3757 274 1 269 310 110 19 chr17 50296758 50296913 -35141567 - L2 LINE L2 -568 2746 2578 740 204 40 10 chr17 50299219 50299281 -35139199 + L1MD3 LINE L1 7776 7835 -160 2106 128 0 3 chr17 50299281 50299577 -35138903 - AluJo SINE Alu -17 295 1 740 204 40 10 chr17 50299577 50299715 -35138765 + L1MD3 LINE L1 7835 7982 -13 409 304 55 50 chr17 50300299 50300500 -35137980 + MIR SINE MIR 21 222 -40 345 306 20 0 chr17 50302756 50302854 -35135626 + MIR SINE MIR 36 135 -73 182 354 30 20 chr17 50304398 50304497 -35133983 - L3b LINE CR1 -201 1382 1283 283 200 48 95 chr17 50304697 50304802 -35133678 + MIR SINE MIR 49 148 -60 254 262 16 0 chr17 50305457 50305518 -35132962 + MIR SINE MIR 93 154 -108 207 0 0 0 chr17 50306765 50306788 -35131692 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 338 287 23 0 chr17 50306789 50306876 -35131604 - L2 LINE L2 -13 3300 3212 867 206 37 82 chr17 50307664 50308018 -35130462 + L1MC4 LINE L1 7694 8031 -11 216 97 0 0 chr17 50308199 50308230 -35130250 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 369 282 22 7 chr17 50309502 50309638 -35128842 + MIR SINE MIR 35 171 -66 2250 99 0 7 chr17 50309857 50310161 -35128319 - AluSx SINE Alu -10 302 1 441 274 110 6 chr17 50310406 50310570 -35127910 - MIR SINE MIR -54 208 28 191 189 0 75 chr17 50311164 50311217 -35127263 - MIR SINE MIR -145 117 69 215 98 0 49 chr17 50311257 50311298 -35127182 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 1028 265 119 9 chr17 50311428 50311907 -35126573 + L2 LINE L2 2754 3299 -14 180 0 0 0 chr17 50311910 50311930 -35126550 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 538 270 50 0 chr17 50312573 50312732 -35125748 - MIR3 SINE MIR -9 199 33 241 231 0 15 chr17 50313091 50313156 -35125324 + G-rich Low_complexity Low_complexity 4 67 0 744 164 30 22 chr17 50313816 50313950 -35124530 - AluJo SINE Alu -177 135 1 2365 93 3 0 chr17 50313974 50314284 -35124196 + AluSp SINE Alu 1 311 -2 239 279 39 48 chr17 50314404 50314508 -35123972 + MIR SINE MIR 71 173 -89 1982 122 6 22 chr17 50314634 50314945 -35123535 + AluSx SINE Alu 5 310 -2 194 390 15 46 chr17 50315071 50315330 -35123150 - L2 LINE L2 -428 2886 2636 1835 150 37 3 chr17 50315863 50316163 -35122317 + AluJo SINE Alu 1 310 -2 1980 118 16 33 chr17 50316169 50316475 -35122005 + AluSx SINE Alu 1 301 -11 644 286 109 18 chr17 50316789 50317009 -35121471 + MIR SINE MIR 20 259 -3 2243 94 0 0 chr17 50317587 50317915 -35120565 - AluSx SINE Alu 0 312 1 185 297 54 14 chr17 50318465 50318539 -35119941 - MIR SINE MIR -105 157 81 441 0 0 0 chr17 50319055 50319104 -35119376 + (TG)n Simple_repeat Simple_repeat 2 50 0 216 317 0 0 chr17 50319232 50319292 -35119188 + (TG)n Simple_repeat Simple_repeat 1 60 0 391 270 113 81 chr17 50319600 50319642 -35118838 - L1ME4a LINE L1 -12 6109 6070 1754 102 41 55 chr17 50319642 50319935 -35118545 + AluSq SINE Alu 4 292 -21 391 270 113 81 chr17 50319935 50320114 -35118366 - L1ME4a LINE L1 -51 6070 5881 293 377 33 14 chr17 50320146 50320361 -35118119 - L1ME4a LINE L1 -299 5822 5604 483 18 0 0 chr17 50320618 50320674 -35117806 + (TG)n Simple_repeat Simple_repeat 2 57 0 185 236 0 55 chr17 50321620 50321675 -35116805 - MIR SINE MIR -196 66 15 231 229 0 0 chr17 50322283 50322331 -35116149 + L2 LINE L2 3209 3256 -16 2296 106 0 10 chr17 50322563 50322875 -35115605 - AluSc SINE Alu 0 309 1 1129 142 0 0 chr17 50322875 50323037 -35115443 - AluJo/FRAM SINE Alu -7 305 144 402 214 0 0 chr17 50323037 50323107 -35115373 - AluJ/FLAM SINE Alu -239 73 4 1798 147 45 7 chr17 50323109 50323277 -35115203 - AluJo SINE Alu -9 303 118 192 77 0 0 chr17 50323277 50323303 -35115177 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 1798 147 45 7 chr17 50323303 50323426 -35115054 - AluJo SINE Alu -194 118 1 198 242 182 83 chr17 50323466 50323598 -35114882 - MER5A DNA MER1_type -37 152 8 2101 113 0 10 chr17 50324439 50324741 -35113739 + AluSx SINE Alu 1 299 -13 251 351 32 0 chr17 50325407 50325501 -35112979 + L2 LINE L2 3176 3272 -41 663 168 30 8 chr17 50326141 50326272 -35112208 - MIR SINE MIR -12 250 117 807 167 0 0 chr17 50326304 50326446 -35112034 - FLAM_C SINE Alu 0 142 1 2338 91 13 0 chr17 50326693 50327001 -35111479 + AluSx SINE Alu 1 312 0 239 274 126 0 chr17 50328823 50328918 -35109562 + MIR SINE MIR 86 192 -70 224 302 23 12 chr17 50329685 50329771 -35108709 - MIR SINE MIR 0 262 176 307 173 0 99 chr17 50329783 50329864 -35108616 - L2 LINE L2 0 3313 3241 402 147 0 0 chr17 50329872 50329940 -35108540 + (CA)n Simple_repeat Simple_repeat 2 69 0 945 244 136 23 chr17 50329940 50330293 -35108187 - L2 LINE L2 -79 3234 2842 339 222 0 0 chr17 50330323 50330395 -35108085 - MIR SINE MIR -89 173 102 279 0 0 0 chr17 50330458 50330489 -35107991 + (TG)n Simple_repeat Simple_repeat 2 32 0 1810 163 3 31 chr17 50330599 50330999 -35107481 + AluJb SINE Alu 1 391 0 243 262 215 9 chr17 50331026 50331133 -35107347 + L2 LINE L2 3143 3271 -1 255 221 44 29 chr17 50331213 50331281 -35107199 - MIR3 SINE MIR -28 180 112 1903 146 0 0 chr17 50331768 50332043 -35106437 - AluJb SINE Alu -20 292 18 705 184 6 48 chr17 50333048 50333071 -35105409 - MIR SINE MIR 0 262 240 1735 171 0 39 chr17 50333071 50333381 -35105099 - AluJo SINE Alu -14 298 1 705 184 6 48 chr17 50333381 50333525 -35104955 - MIR SINE MIR -22 240 102 228 67 0 0 chr17 50333612 50333642 -35104838 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 460 246 74 112 chr17 50333648 50333863 -35104617 - MIR SINE MIR -13 249 43 1835 168 7 0 chr17 50334143 50334434 -35104046 - AluJo SINE Alu -17 295 3 21 0 0 0 chr17 50334438 50334459 -35104021 + AT_rich Low_complexity Low_complexity 1 21 0 312 295 197 0 chr17 50335032 50335225 -35103255 + MER115 DNA AcHobo 18 248 -445 534 217 9 0 chr17 50337303 50337409 -35101071 + MER81 DNA DNA 8 114 0 233 244 26 13 chr17 50337749 50337827 -35100653 - MIR SINE MIR -65 197 119 198 277 235 17 chr17 50337801 50337920 -35100560 - MIR3 SINE MIR -63 145 1 * 2034 116 11 0 chr17 50338393 50338670 -35099810 + AluSx SINE Alu 1 280 -32 186 43 0 0 chr17 50338671 50338694 -35099786 + (CAA)n Simple_repeat Simple_repeat 2 24 0 50 59 0 0 chr17 50339631 50339716 -35098764 + GC_rich Low_complexity Low_complexity 1 85 0 1528 124 18 62 chr17 50340238 50340511 -35097969 + AluJo SINE Alu 11 271 -41 513 345 70 62 chr17 50341772 50342242 -35096238 + L2 LINE L2 2410 2883 -431 210 319 44 35 chr17 50342641 50342754 -35095726 + L2 LINE L2 3147 3260 -12 2721 13 0 0 chr17 50343600 50343905 -35094575 + AluYa5 SINE Alu 1 305 -6 239 277 109 76 chr17 50344457 50344576 -35093904 - MIR SINE MIR -38 224 102 409 229 160 7 chr17 50345580 50345724 -35092756 + MIR3 SINE MIR 18 183 -25 306 206 0 0 chr17 50346596 50346669 -35091811 + (CA)n Simple_repeat Simple_repeat 2 74 0 402 252 0 0 chr17 50346698 50346845 -35091635 + (CA)n Simple_repeat Simple_repeat 1 147 0 205 352 14 14 chr17 50347661 50347732 -35090748 - L2 LINE L2 -89 3183 3113 319 243 147 21 chr17 50348423 50348588 -35089892 + MIR SINE MIR 34 221 -41 217 269 13 26 chr17 50349360 50349438 -35089042 + GA-rich Low_complexity Low_complexity 3 79 0 * 269 242 0 16 chr17 50349385 50349447 -35089033 + G-rich Low_complexity Low_complexity 3 63 0 264 240 148 30 chr17 50351145 50351288 -35087192 - MIR SINE MIR -55 153 3 702 128 0 0 chr17 50351461 50351578 -35086902 + (GGA)n Simple_repeat Simple_repeat 1 117 0 659 228 43 10 chr17 50352572 50352773 -35085707 + MIR SINE MIR 51 262 0 212 256 0 0 chr17 50353672 50353715 -35084765 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 273 365 17 17 chr17 50353767 50353945 -35084535 + L3 LINE CR1 1393 1570 -7 1991 123 6 22 chr17 50354491 50354808 -35083672 - AluSx SINE Alu 0 312 1 251 200 100 0 chr17 50354828 50354878 -35083602 + L2 LINE L2 3242 3296 -17 266 323 100 39 chr17 50354901 50355130 -35083350 + L2 LINE L2 2949 3191 -81 504 224 133 0 chr17 50355372 50355515 -35082965 + MIR SINE MIR 32 193 -69 568 296 17 17 chr17 50355900 50356079 -35082401 - MIR SINE MIR -56 206 28 242 207 17 0 chr17 50356343 50356401 -35082079 + L3 LINE CR1 1354 1412 -165 214 197 28 28 chr17 50356570 50356641 -35081839 + L3 LINE CR1 1431 1501 -76 * 605 299 91 0 chr17 50356640 50356837 -35081643 + MIR SINE MIR 16 230 -32 187 222 63 32 chr17 50356903 50356916 -35081564 + MIR3 SINE MIR 139 150 -58 2412 63 3 0 chr17 50356916 50357215 -35081265 + AluSp SINE Alu 1 300 -13 187 222 63 32 chr17 50357215 50357264 -35081216 + MIR3 SINE MIR 150 203 -5 828 172 0 15 chr17 50357803 50357937 -35080543 + FLAM_C SINE Alu 1 132 -1 40 37 0 0 chr17 50357937 50357991 -35080489 + AT_rich Low_complexity Low_complexity 1 54 0 1957 129 0 32 chr17 50357998 50358309 -35080171 + AluSg SINE Alu 1 301 -9 212 200 17 50 chr17 50358773 50358833 -35079647 + L2 LINE L2 3221 3278 -35 * 213 197 148 33 chr17 50358800 50358861 -35079619 + L2 LINE L2 3205 3272 0 209 258 0 0 chr17 50359243 50359305 -35079175 + (TG)n Simple_repeat Simple_repeat 1 62 0 235 191 70 61 chr17 50361238 50361324 -35077156 + MIR SINE MIR 88 173 -89 2250 64 0 0 chr17 50361763 50362071 -35076409 - AluY SINE Alu 0 308 1 644 262 75 0 chr17 50362427 50362614 -35075866 + MIR SINE MIR 46 246 -16 458 273 107 19 chr17 50363227 50363432 -35075048 - MIR SINE MIR -12 250 28 652 297 122 58 chr17 50364224 50364583 -35073897 - L2 LINE L2 -3 3310 2896 2073 89 0 4 chr17 50364583 50364863 -35073617 + AluSg SINE Alu 1 279 -31 652 297 122 58 chr17 50364863 50365092 -35073388 - L2 LINE L2 -417 2896 2683 327 304 15 30 chr17 50367085 50367220 -35071260 + L3 LINE CR1 1337 1469 -108 2320 53 0 20 chr17 50367320 50367620 -35070860 - AluY SINE Alu -17 294 1 2236 82 0 10 chr17 50367620 50367923 -35070557 - AluSx SINE Alu -6 306 7 185 333 140 9 chr17 50368672 50368786 -35069694 + MIR SINE MIR 24 152 -110 1894 142 0 26 chr17 50368902 50369211 -35069269 + AluJo SINE Alu 1 301 -11 213 94 0 0 chr17 50369317 50369349 -35069131 + (CA)n Simple_repeat Simple_repeat 2 33 0 235 298 36 48 chr17 50369752 50369920 -35068560 + L2 LINE L2 2621 2786 -528 280 274 121 45 chr17 50369976 50370133 -35068347 - L3 LINE CR1 -27 1550 1382 539 284 25 30 chr17 50370658 50370855 -35067625 + L2 LINE L2 3113 3308 -5 272 296 72 32 chr17 50370869 50370994 -35067486 + L2 LINE L2 3141 3270 -2 759 179 0 8 chr17 50371041 50371164 -35067316 - FLAM_A SINE Alu -11 122 1 253 257 40 0 chr17 50371526 50371600 -35066880 + MIR SINE MIR 88 164 -98 448 258 59 97 chr17 50372075 50372321 -35066159 + MIR3 SINE MIR 16 254 -8 255 216 0 0 chr17 50374202 50374253 -35064227 - MER115 DNA AcHobo -5 688 638 2246 88 14 0 chr17 50374320 50374614 -35063866 - AluSx SINE Alu -14 298 1 2184 117 0 0 chr17 50374623 50374922 -35063558 - AluSg SINE Alu -9 301 3 21 36 0 0 chr17 50374984 50375012 -35063468 + AT_rich Low_complexity Low_complexity 1 28 0 1600 158 27 7 chr17 50375077 50375369 -35063111 - AluJo SINE Alu -4 308 11 1368 178 17 92 chr17 50375471 50375830 -35062650 + L1MB7 LINE L1 5786 6117 -67 2041 118 3 22 chr17 50375830 50376144 -35062336 + AluSg SINE Alu 1 308 -2 930 135 40 0 chr17 50376167 50376315 -35062165 - FRAM SINE Alu -19 157 4 1264 130 0 0 chr17 50376316 50376523 -35061957 + L1P LINE L1 4474 4680 -1466 1743 164 17 10 chr17 50376771 50377070 -35061410 - AluSx SINE Alu -11 301 1 742 208 27 18 chr17 50377305 50377490 -35060990 - MER70B LTR ERVL 0 476 320 2552 131 62 17 chr17 50377492 50377860 -35060620 + MSTB LTR MaLR 1 390 -36 2307 80 0 3 chr17 50377860 50378160 -35060320 - AluY SINE Alu -11 300 2 2552 131 62 17 chr17 50378160 50378197 -35060283 + MSTB LTR MaLR 390 424 -2 8823 171 38 3 chr17 50378197 50379719 -35058761 + MSTB-int LTR MaLR 1 1576 -75 1800 160 34 20 chr17 50379719 50380084 -35058396 + MSTB LTR MaLR 68 425 -3 2161 99 0 30 chr17 50380084 50380387 -35058093 + AluY SINE Alu 1 294 -17 1225 228 16 8 chr17 50380398 50380644 -35057836 - MER70B LTR ERVL -254 324 77 2110 116 7 0 chr17 50381272 50381565 -35056915 + AluSx SINE Alu 3 297 -15 1581 179 21 3 chr17 50381922 50382213 -35056267 + AluJb SINE Alu 1 296 -16 2160 88 0 14 chr17 50382333 50382630 -35055850 + AluSc SINE Alu 1 293 -16 2147 109 7 0 chr17 50382696 50382999 -35055481 + AluSx SINE Alu 1 305 -7 281 345 124 62 chr17 50383426 50383701 -35054779 - MLT1K LTR MaLR -259 329 38 422 313 99 31 chr17 50383821 50384213 -35054267 + L2 LINE L2 2094 3246 -26 333 0 0 0 chr17 50384758 50384795 -35053685 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 325 298 73 0 chr17 50384898 50385022 -35053458 + L2 LINE L2 3181 3313 0 561 190 374 0 chr17 50385039 50385202 -35053278 - MER58A DNA MER1_type 0 224 1 654 135 0 0 chr17 50385844 50385940 -35052540 - AluSc SINE Alu -200 109 14 953 164 6 12 chr17 50385963 50386153 -35052327 + AluJb SINE Alu 135 312 0 244 276 172 0 chr17 50386177 50386293 -35052187 + L1M4c LINE L1 266 401 -6245 2698 202 62 60 chr17 50386353 50386904 -35051576 + L1M4c LINE L1 829 1377 -5165 2050 107 40 3 chr17 50386904 50387202 -35051278 + AluSg SINE Alu 2 310 0 2698 202 62 60 chr17 50387202 50387300 -35051180 + L1M4c LINE L1 1377 1473 -5069 2252 108 0 0 chr17 50387300 50387596 -35050884 + AluSc SINE Alu 4 299 -10 2698 202 62 60 chr17 50387596 50387815 -35050665 + L1M4c LINE L1 1473 1700 -4842 1336 259 30 37 chr17 50387815 50388424 -35050056 + L2 LINE L2 2701 3313 0 368 301 101 34 chr17 50388527 50389259 -35049221 - L1ME3A LINE L1 -280 6170 5488 2113 131 0 0 chr17 50389259 50389557 -35048923 - AluSq SINE Alu -15 298 1 368 301 101 34 chr17 50389557 50389642 -35048838 - L1ME3A LINE L1 -962 5488 5410 2009 141 3 6 chr17 50389642 50389955 -35048525 - AluSx SINE Alu 0 312 1 368 301 101 34 chr17 50389955 50390014 -35048466 - L1ME3A LINE L1 -1040 5410 5156 1790 225 84 96 chr17 50390023 50390399 -35048081 - L1ME3A LINE L1 -1310 5116 4737 2291 89 0 0 chr17 50390399 50390703 -35047777 - AluY SINE Alu -7 304 1 1790 225 84 96 chr17 50390703 50391320 -35047160 - L1ME3A LINE L1 -1689 4737 4114 1986 119 24 3 chr17 50391320 50391613 -35046867 - AluSq SINE Alu -14 299 1 1790 225 84 96 chr17 50391613 50391761 -35046719 - L1ME3A LINE L1 -2312 4114 3966 799 183 15 0 chr17 50391761 50391892 -35046588 - FLAM_A SINE Alu 0 133 1 1790 225 84 96 chr17 50391892 50392186 -35046294 - L1ME3A LINE L1 -2460 3966 3720 2018 94 40 13 chr17 50392189 50392487 -35045993 - AluSq SINE Alu -7 306 1 315 257 40 105 chr17 50392533 50392685 -35045795 - L1M4 LINE L1 -2091 4055 3914 1490 209 45 3 chr17 50392699 50392816 -35045664 + AluJo SINE Alu 1 112 -200 351 0 0 0 chr17 50392816 50392855 -35045625 + (CA)n Simple_repeat Simple_repeat 2 40 0 1490 209 45 3 chr17 50392855 50393029 -35045451 + AluJo SINE Alu 112 304 -8 330 143 29 29 chr17 50393218 50393229 -35045251 - L1MC2 LINE L1 -3 6341 6331 2395 77 0 6 chr17 50393229 50393542 -35044938 - AluY SINE Alu 0 311 1 330 143 29 29 chr17 50393542 50393600 -35044880 - L1MC2 LINE L1 -12 6332 6272 318 256 31 20 chr17 50393706 50393807 -35044673 - L1ME3A LINE L1 -1339 6983 1995 318 367 0 11 chr17 50393730 50393820 -35044660 + L1MC4 LINE L1 6615 6703 -1339 301 271 15 8 chr17 50393829 50393962 -35044518 + (CATG)n Simple_repeat Simple_repeat 1 134 0 302 385 19 0 chr17 50393962 50394066 -35044414 + L1MC4 LINE L1 6597 6702 -1340 * 309 390 0 16 chr17 50393989 50394112 -35044368 - L1MC4 LINE L1 -1339 6703 6583 * 317 374 0 0 chr17 50394107 50394198 -35044282 + L1MC4 LINE L1 6616 6706 -1336 390 237 22 7 chr17 50394199 50394338 -35044142 + (CATG)n Simple_repeat Simple_repeat 3 143 0 340 384 0 0 chr17 50394423 50394522 -35043958 - L1MC4 LINE L1 -1330 6712 6614 * 369 238 22 4 chr17 50394444 50394559 -35043921 + L1MC4 LINE L1 1995 6983 -1339 1412 172 119 8 chr17 50394599 50394860 -35043620 - AluJb SINE Alu -11 291 2 261 182 0 18 chr17 50394860 50394915 -35043565 + MLT2B2 LTR ERVL 1 54 -461 283 281 26 9 chr17 50395243 50395349 -35043131 - MIR SINE MIR -12 196 82 217 188 42 0 chr17 50396048 50396096 -35042384 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 396 266 43 29 chr17 50396744 50396883 -35041597 + L2 LINE L2 3172 3312 -1 396 300 50 0 chr17 50398299 50398419 -35040061 + MIR3 SINE MIR 30 155 -53 851 177 0 43 chr17 50398562 50398573 -35039907 - FRAM SINE Alu -136 40 30 2269 92 0 16 chr17 50398573 50398888 -35039592 - AluSg SINE Alu 0 310 1 851 177 0 43 chr17 50398888 50399040 -35039440 - FRAM SINE Alu -146 30 1 2032 116 20 7 chr17 50399056 50399358 -35039122 - AluSx SINE Alu -5 307 2 619 306 48 17 chr17 50399522 50399813 -35038667 + L1M4 LINE L1 4029 4328 -1818 659 146 0 27 chr17 50399831 50399941 -35038539 - FLAM_A SINE Alu -3 139 33 238 253 0 13 chr17 50399941 50400020 -35038460 + L1M4 LINE L1 5084 5161 -985 839 162 0 22 chr17 50400027 50400163 -35038317 + FLAM_A SINE Alu 1 133 0 1662 241 102 24 chr17 50400173 50400346 -35038134 + L1M4 LINE L1 4319 4477 -1669 1707 167 50 0 chr17 50400346 50400628 -35037852 + AluJb SINE Alu 1 296 -16 1662 241 102 24 chr17 50400628 50400738 -35037742 + L1M4 LINE L1 4477 4577 -1569 216 0 0 0 chr17 50400738 50400762 -35037718 + (TG)n Simple_repeat Simple_repeat 1 24 0 1662 241 102 24 chr17 50400762 50401193 -35037287 + L1M4 LINE L1 4577 5094 -1052 225 0 0 0 chr17 50401193 50401218 -35037262 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1010 171 9 5 chr17 50401345 50401537 -35036943 + L1P LINE L1 4815 5010 -1136 2029 143 0 0 chr17 50401537 50401837 -35036643 - AluSx SINE Alu -11 301 2 1010 171 9 5 chr17 50401837 50401855 -35036625 + L1P LINE L1 5010 5026 -1120 363 182 0 0 chr17 50401855 50401905 -35036575 + L1MB8 LINE L1 6112 6177 -1 445 245 19 19 chr17 50401928 50401977 -35036503 + MER103 DNA DNA 4 52 -114 814 161 0 36 chr17 50401977 50402114 -35036366 + FLAM_A SINE Alu 1 132 -1 445 245 19 19 chr17 50402114 50402223 -35036257 + MER103 DNA DNA 51 162 -4 768 113 7 21 chr17 50402429 50402571 -35035909 + L1M4 LINE L1 5320 5459 -719 502 286 123 0 chr17 50403089 50403260 -35035220 - MIR SINE MIR -1 261 70 210 259 17 0 chr17 50404798 50404856 -35033624 + CT-rich Low_complexity Low_complexity 1 59 0 211 172 0 52 chr17 50406072 50406130 -35032350 - L2 LINE L2 -214 3058 3004 1650 134 33 53 chr17 50407018 50407317 -35031163 + AluSx SINE Alu 1 293 -19 192 143 0 0 chr17 50407624 50407666 -35030814 + (TC)n Simple_repeat Simple_repeat 1 42 0 465 19 0 0 chr17 50407744 50407798 -35030682 + (TC)n Simple_repeat Simple_repeat 2 55 0 240 111 0 0 chr17 50407862 50407898 -35030582 + (TG)n Simple_repeat Simple_repeat 2 37 0 235 357 51 0 chr17 50407910 50408008 -35030472 - MIR SINE MIR -71 137 35 230 250 0 0 chr17 50408016 50408064 -35030416 + MIR SINE MIR 79 126 -136 2608 271 87 1 chr17 50408082 50408958 -35029522 - L1ME3A LINE L1 -5 6165 5198 2008 105 24 0 chr17 50408958 50409282 -35029198 - AluSq SINE Alu 0 313 1 2608 271 87 1 chr17 50409282 50409326 -35029154 - L1ME3A LINE L1 -972 5198 5159 657 198 0 0 chr17 50409328 50409444 -35029036 - FRAM SINE Alu -9 167 52 437 99 28 0 chr17 50409567 50409638 -35028842 + GA-rich Low_complexity Low_complexity 2 74 0 384 176 146 199 chr17 50409818 50409953 -35028527 + MIR SINE MIR 10 126 -136 2183 88 0 26 chr17 50409953 50410258 -35028222 - AluSg SINE Alu -13 297 1 384 176 146 199 chr17 50410258 50410389 -35028091 + MIR SINE MIR 126 262 0 243 147 37 18 chr17 50411560 50411669 -35026811 + (TG)n Simple_repeat Simple_repeat 1 111 0 235 227 45 11 chr17 50411710 50411798 -35026682 + (TG)n Simple_repeat Simple_repeat 1 91 0 267 79 0 0 chr17 50412311 50412349 -35026131 + (TC)n Simple_repeat Simple_repeat 1 38 0 349 283 31 44 chr17 50413867 50414026 -35024454 - MIR3 SINE MIR -38 170 14 491 150 0 0 chr17 50414039 50414119 -35024361 - U6 snRNA snRNA -1 106 27 215 65 0 0 chr17 50414367 50414398 -35024082 + MIR SINE MIR 123 153 -109 366 23 0 0 chr17 50414413 50414456 -35024024 + (TG)n Simple_repeat Simple_repeat 1 43 0 255 31 0 0 chr17 50415349 50415381 -35023099 + (TCC)n Simple_repeat Simple_repeat 1 32 0 1612 180 21 0 chr17 50415381 50415664 -35022816 - AluJo SINE Alu -20 292 4 225 283 0 0 chr17 50418147 50418207 -35020273 + G-rich Low_complexity Low_complexity 1 60 0 201 345 11 23 chr17 50419098 50419185 -35019295 - MIR3 SINE MIR -11 197 112 215 333 0 0 chr17 50423330 50423390 -35015090 + MIR SINE MIR 36 95 -113 221 267 187 0 chr17 50423711 50423786 -35014694 - L2 LINE L2 -2 3270 3182 796 250 46 58 chr17 50425069 50425309 -35013171 + MIR SINE MIR 14 250 -12 2252 88 3 0 chr17 50427010 50427306 -35011174 + AluSc SINE Alu 1 297 -12 202 367 0 0 chr17 50427736 50427815 -35010665 + T-rich Low_complexity Low_complexity 1 79 0 327 191 152 29 chr17 50428139 50428244 -35010236 + MIR SINE MIR 6 123 -139 328 274 10 31 chr17 50429656 50429759 -35008721 + MIR3 SINE MIR 79 173 -35 489 320 69 6 chr17 50429981 50430111 -35008369 + MIR SINE MIR 77 222 -40 2384 75 0 10 chr17 50430111 50430418 -35008062 + AluSx SINE Alu 1 304 -8 489 320 69 6 chr17 50430418 50430462 -35008018 + MIR SINE MIR 222 262 0 431 319 95 56 chr17 50430945 50430969 -35007511 + L1M4 LINE L1 4182 4204 -1942 2457 83 0 0 chr17 50430969 50431281 -35007199 + AluSx SINE Alu 1 312 0 431 319 95 56 chr17 50431281 50431488 -35006992 + L1M4 LINE L1 4204 4422 -1724 2190 117 3 0 chr17 50431796 50432105 -35006375 + AluSq SINE Alu 1 310 -3 440 316 22 7 chr17 50432134 50432273 -35006207 - MIR SINE MIR -41 221 81 401 333 8 8 chr17 50432272 50432398 -35006082 + MIR SINE MIR 117 242 -20 * 325 169 26 39 chr17 50433207 50433284 -35005196 + MIR SINE MIR 58 133 -75 243 240 39 101 chr17 50433501 50433630 -35004850 - L2 LINE L2 -2 3270 3150 216 379 84 26 chr17 50433747 50433937 -35004543 - L2 LINE L2 -49 3223 3023 202 268 0 0 chr17 50434235 50434276 -35004204 + C-rich Low_complexity Low_complexity 5 45 0 292 179 0 18 chr17 50435148 50435204 -35003276 + L2 LINE L2 3249 3303 -10 251 179 0 54 chr17 50435154 50435210 -35003270 + MIR SINE MIR 210 262 0 * 981 281 12 16 chr17 50435368 50435617 -35002863 - MIR SINE MIR -12 250 3 495 301 182 0 chr17 50435764 50435967 -35002513 + MIR SINE MIR 19 258 -4 269 200 17 17 chr17 50436351 50436411 -35002069 + CT-rich Low_complexity Low_complexity 4 63 0 266 161 11 126 chr17 50436784 50436871 -35001609 - MIR SINE MIR -80 182 106 1904 166 13 0 chr17 50436923 50437231 -35001249 - AluJb SINE Alu 0 312 1 459 0 0 0 chr17 50437284 50437335 -35001145 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 54 0 0 chr17 50438571 50438608 -34999872 + AT_rich Low_complexity Low_complexity 1 37 0 951 205 73 34 chr17 50440305 50440539 -34997941 + MIR SINE MIR 6 248 -14 320 290 25 0 chr17 50440608 50440770 -34997710 + (CA)n Simple_repeat Simple_repeat 1 166 0 21 82 0 0 chr17 50441993 50442042 -34996438 + GC_rich Low_complexity Low_complexity 1 49 0 262 175 32 0 chr17 50442282 50442345 -34996135 - L1MD3 LINE L1 -2 7993 7929 180 259 0 0 chr17 50442347 50442401 -34996079 + CT-rich Low_complexity Low_complexity 3 56 0 203 96 77 0 chr17 50443633 50443685 -34994795 + CT-rich Low_complexity Low_complexity 2 57 0 288 0 0 0 chr17 50443716 50443748 -34994732 + (CA)n Simple_repeat Simple_repeat 2 33 0 452 124 115 26 chr17 50444035 50444148 -34994332 - ORSL DNA AcHobo -63 212 90 204 40 0 0 chr17 50445649 50445674 -34992806 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 298 278 33 33 chr17 50446911 50447001 -34991479 + MIR3 SINE MIR 119 208 0 620 307 63 47 chr17 50447109 50447409 -34991071 - L2 LINE L2 -1 3271 2967 244 271 35 35 chr17 50447488 50447573 -34990907 + MIR3 SINE MIR 124 208 0 592 353 34 71 chr17 50447592 50448144 -34990336 - L2 LINE L2 -434 2880 2349 2201 227 39 30 chr17 50448151 50448404 -34990076 - L1ME3A LINE L1 -13 6157 5908 1962 157 30 12 chr17 50448404 50448742 -34989738 - MER2 DNA MER2_type 0 344 1 2201 227 39 30 chr17 50448742 50449086 -34989394 - L1ME3A LINE L1 -262 5908 5555 665 335 148 21 chr17 50449088 50449857 -34988623 - L2 LINE L2 -955 2359 1493 690 253 25 0 chr17 50449865 50450023 -34988457 - MIR SINE MIR -1 261 100 251 267 22 22 chr17 50450108 50450198 -34988282 + L1MC5 LINE L1 7839 7928 -33 234 0 0 0 chr17 50450239 50450265 -34988215 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1675 150 52 21 chr17 50450275 50450562 -34987918 + AluJo SINE Alu 1 296 -16 344 267 58 0 chr17 50450591 50450677 -34987803 + L1M4 LINE L1 4152 4242 -1904 1211 178 0 5 chr17 50450677 50450874 -34987606 + AluJo SINE Alu 1 196 -116 928 221 56 11 chr17 50450874 50451159 -34987321 + L1M4 LINE L1 4427 4724 -1422 891 120 0 0 chr17 50451175 50451292 -34987188 + AluJb SINE Alu 1 117 -195 627 14 0 0 chr17 50451292 50451364 -34987116 + (TAAAA)n Simple_repeat Simple_repeat 4 75 0 466 208 0 0 chr17 50451364 50451465 -34987015 + L1M4 LINE L1 4763 4863 -1283 1620 116 0 5 chr17 50451568 50451792 -34986688 + AluSg/x SINE Alu 74 296 -16 182 176 0 0 chr17 50451815 50451849 -34986631 - MIR SINE MIR -63 145 112 548 312 123 15 chr17 50451966 50452421 -34986059 - L1MC4a LINE L1 -1741 6067 5564 261 157 214 0 chr17 50452770 50452840 -34985640 - MER94 DNA DNA -22 112 28 2143 115 0 0 chr17 50452851 50453138 -34985342 - AluSx SINE Alu -21 291 5 541 238 107 94 chr17 50453572 50453724 -34984756 - MIR SINE MIR 0 262 104 2135 122 0 0 chr17 50453724 50454018 -34984462 + AluSx SINE Alu 1 294 -18 541 238 107 94 chr17 50454018 50454109 -34984371 - MIR SINE MIR -158 104 16 * 636 248 68 48 chr17 50454082 50454288 -34984192 - MIR SINE MIR -43 219 10 227 261 29 0 chr17 50454707 50454776 -34983704 + L2 LINE L2 3185 3255 -17 1757 175 3 3 chr17 50455527 50455824 -34982656 - AluJo SINE Alu -15 297 1 283 261 54 22 chr17 50456117 50456209 -34982271 - MIR3 SINE MIR -10 198 104 765 274 45 18 chr17 50456691 50456914 -34981566 + MIR SINE MIR 24 252 -10 489 17 0 0 chr17 50456918 50456976 -34981504 + (CA)n Simple_repeat Simple_repeat 2 59 0 212 335 76 27 chr17 50457990 50458175 -34980305 + L2 LINE L2 2685 2878 -436 * 432 325 160 5 chr17 50458168 50458374 -34980106 + MIR SINE MIR 16 253 -9 2245 102 7 0 chr17 50458376 50458681 -34979799 - AluSx SINE Alu -5 307 1 260 273 111 10 chr17 50458894 50458993 -34979487 + L2 LINE L2 2940 3048 -224 518 302 37 11 chr17 50459073 50459262 -34979218 + MER91A DNA MER1_type 3 196 0 203 277 128 11 chr17 50459707 50459801 -34978679 - MIR3 SINE MIR -53 155 51 413 275 107 7 chr17 50459917 50460066 -34978414 + MIR SINE MIR 85 248 -14 23 33 0 0 chr17 50460483 50460513 -34977967 + GC_rich Low_complexity Low_complexity 1 30 0 34 55 0 0 chr17 50460613 50460668 -34977812 + GC_rich Low_complexity Low_complexity 1 55 0 224 241 13 51 chr17 50460908 50460987 -34977493 - MIR SINE MIR -170 92 17 805 233 85 6 chr17 50461589 50461765 -34976715 + AluSg/x SINE Alu 121 310 -2 183 80 0 0 chr17 50461765 50461790 -34976690 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 1950 120 27 7 chr17 50462303 50462602 -34975878 - AluSx SINE Alu -7 305 1 214 306 112 31 chr17 50463586 50463684 -34974796 + MIR3 SINE MIR 60 165 -43 751 245 42 21 chr17 50463822 50464014 -34974466 + MER91A DNA MER1_type 1 196 0 183 297 188 0 chr17 50464412 50464550 -34973930 - L2 LINE L2 -193 3079 2916 1637 172 9 65 chr17 50465414 50465739 -34972741 + AluJo SINE Alu 1 307 -5 315 307 64 50 chr17 50465760 50465882 -34972598 + L1ME3A LINE L1 5734 5863 -307 2185 85 0 0 chr17 50465882 50466194 -34972286 + AluY SINE Alu 1 312 0 315 307 64 50 chr17 50466194 50466288 -34972192 + L1ME3A LINE L1 5863 5954 -216 1392 126 13 17 chr17 50466567 50466797 -34971683 + AluSg/x SINE Alu 73 301 -11 1455 159 70 12 chr17 50466841 50466968 -34971512 + AluJb SINE Alu 9 127 -182 2334 83 0 13 chr17 50466968 50467282 -34971198 + AluSq SINE Alu 1 310 -3 1455 159 70 12 chr17 50467282 50467440 -34971040 + AluJb SINE Alu 127 309 0 300 349 14 27 chr17 50468351 50468497 -34969983 - MIR3 SINE MIR -13 195 52 2145 98 0 7 chr17 50468889 50469200 -34969280 - AluSx SINE Alu 0 309 1 246 294 18 28 chr17 50470396 50470505 -34967975 + CT-rich Low_complexity Low_complexity 2 109 0 247 335 122 14 chr17 50470797 50470946 -34967534 - MIR SINE MIR -78 130 18 2558 51 6 0 chr17 50471144 50471455 -34967025 + AluSp SINE Alu 1 313 0 564 238 40 26 chr17 50472502 50472653 -34965827 - MIR SINE MIR 0 262 110 820 206 0 0 chr17 50472667 50472808 -34965672 + FRAM SINE Alu 1 141 -35 2163 99 0 23 chr17 50472809 50473111 -34965369 - AluSx SINE Alu -17 295 1 1691 162 93 38 chr17 50473125 50473551 -34964929 - L1M4 LINE L1 -695 5489 5027 2028 138 0 0 chr17 50473551 50473849 -34964631 + AluSx SINE Alu 1 298 -14 1691 162 93 38 chr17 50473849 50473955 -34964525 - L1M4 LINE L1 -1157 5027 4928 208 350 80 12 chr17 50474072 50474235 -34964245 + L2 LINE L2 2839 3012 -260 1040 274 0 8 chr17 50474239 50474487 -34963993 - MIR SINE MIR 0 262 17 257 276 152 48 chr17 50474622 50474767 -34963713 - MIR3 SINE MIR -5 203 44 491 289 72 11 chr17 50475259 50475439 -34963041 + MIR SINE MIR 30 220 -42 494 225 205 7 chr17 50475967 50476118 -34962362 - MIR SINE MIR -13 249 69 409 347 8 0 chr17 50476527 50476651 -34961829 + MIR SINE MIR 110 234 -28 1854 133 21 11 chr17 50477002 50477288 -34961192 + AluSx SINE Alu 14 302 -10 219 204 0 0 chr17 50477293 50477342 -34961138 + G-rich Low_complexity Low_complexity 4 52 0 232 241 190 0 chr17 50479243 50479322 -34959158 - MIR SINE MIR -85 177 84 262 377 19 19 chr17 50479406 50479565 -34958915 - L2 LINE L2 -206 3066 2908 1995 148 131 22 chr17 50479566 50479978 -34958502 - LTR32 LTR ERVL 0 471 15 262 347 131 3 chr17 50480526 50480936 -34957544 - L2 LINE L2 -252 3061 2593 198 301 87 87 chr17 50480990 50481209 -34957271 - L2 LINE L2 -900 2414 2196 1777 120 88 0 chr17 50481211 50481485 -34956995 + AluSg SINE Alu 1 298 -12 346 229 52 0 chr17 50483294 50483398 -34955082 - MIR3 SINE MIR -41 167 54 2230 136 87 8 chr17 50483764 50484154 -34954326 - LTR52 LTR ERVL 0 421 1 374 322 102 0 chr17 50485008 50485185 -34953295 + MIR SINE MIR 18 212 -50 430 184 16 96 chr17 50485207 50485332 -34953148 + MER69A DNA AcHobo 60 174 -3 547 240 207 28 chr17 50485357 50485574 -34952906 + MIR SINE MIR 7 262 0 2165 54 11 4 chr17 50485610 50485886 -34952594 + AluSg SINE Alu 1 278 -32 216 0 0 0 chr17 50485892 50485916 -34952564 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2229 84 0 7 chr17 50485996 50486292 -34952188 - AluSg SINE Alu -16 294 1 183 42 0 0 chr17 50486916 50486940 -34951540 + (CAG)n Simple_repeat Simple_repeat 1 24 0 26 30 0 0 chr17 50487631 50487664 -34950816 + GC_rich Low_complexity Low_complexity 1 33 0 278 325 163 12 chr17 50489281 50489441 -34949039 + MIR3 SINE MIR 14 197 -11 182 339 36 36 chr17 50489521 50489633 -34948847 + MIR SINE MIR 113 224 -38 2325 103 0 0 chr17 50492947 50493258 -34945222 + AluSx SINE Alu 1 311 -1 291 315 98 28 chr17 50493369 50493553 -34944927 - MIR SINE MIR -55 207 13 195 69 0 0 chr17 50493863 50493892 -34944588 + (CCCTG)n Simple_repeat Simple_repeat 3 31 0 330 336 45 39 chr17 50494676 50495173 -34943307 + L2 LINE L2 2633 3199 -73 451 307 52 17 chr17 50496357 50496669 -34941811 - MLT1K LTR MaLR -62 526 177 477 103 21 52 chr17 50496766 50496863 -34941617 - THE1B LTR MaLR -81 283 190 207 0 0 0 chr17 50496869 50496892 -34941588 + (TC)n Simple_repeat Simple_repeat 2 24 0 1361 168 125 46 chr17 50496905 50496941 -34941539 - AluJb SINE Alu 0 302 270 2288 102 0 3 chr17 50496941 50497246 -34941234 + AluSg SINE Alu 1 304 -6 1361 168 125 46 chr17 50497246 50497489 -34940991 - AluJb SINE Alu -32 270 1 1067 159 16 5 chr17 50497498 50497687 -34940793 - AluJo SINE Alu 0 312 122 1541 187 61 0 chr17 50497699 50497977 -34940503 + AluJb SINE Alu 1 295 -17 570 232 119 0 chr17 50497977 50498154 -34940326 - L1ME2 LINE L1 -10 6154 5957 458 329 14 0 chr17 50498295 50498438 -34940042 - L2 LINE L2 -5 3308 3164 882 263 57 0 chr17 50498583 50498830 -34939650 + MIR SINE MIR 2 262 0 454 268 88 39 chr17 50499637 50499689 -34938791 - MIR SINE MIR -15 247 199 1967 156 0 3 chr17 50499689 50499991 -34938489 - AluJb SINE Alu -11 301 1 2294 69 0 3 chr17 50499999 50500337 -34938143 - AluY SINE Alu 0 311 1 454 268 88 39 chr17 50500337 50500480 -34938000 - MIR SINE MIR -69 193 33 1953 166 0 0 chr17 50500574 50500870 -34937610 + AluJo SINE Alu 2 297 -15 346 296 99 8 chr17 50501415 50501553 -34936927 + MIR SINE MIR 35 203 -59 2336 97 6 0 chr17 50501553 50501864 -34936616 + AluSq SINE Alu 1 313 0 346 296 99 8 chr17 50501864 50501930 -34936550 + MIR SINE MIR 203 262 0 197 346 178 9 chr17 50502216 50502323 -34936157 - L2 LINE L2 0 3272 3148 397 307 110 18 chr17 50504459 50504622 -34933858 + MIR SINE MIR 2 179 -83 927 159 19 0 chr17 50504622 50504779 -34933701 + AluJo SINE Alu 122 281 -31 480 35 0 0 chr17 50504783 50504841 -34933639 + (CA)n Simple_repeat Simple_repeat 2 59 0 203 217 43 58 chr17 50504866 50504935 -34933545 + MIR3 SINE MIR 99 166 -42 262 219 109 0 chr17 50505919 50505983 -34932497 + MIR SINE MIR 2 72 -190 541 321 24 0 chr17 50506050 50506218 -34932262 + MIR SINE MIR 89 260 -2 410 298 23 8 chr17 50506311 50506442 -34932038 + MIR3 SINE MIR 7 139 -69 474 347 68 0 chr17 50508862 50509052 -34929428 - MIR SINE MIR -6 256 54 702 296 11 0 chr17 50509732 50509921 -34928559 - MIR SINE MIR -41 221 31 392 127 0 13 chr17 50511653 50511732 -34926748 + (TG)n Simple_repeat Simple_repeat 2 79 0 267 350 23 55 chr17 50511732 50511952 -34926528 + L2 LINE L2 2871 3083 -189 835 233 37 0 chr17 50512057 50512246 -34926234 - MER58A DNA MER1_type -10 214 19 402 281 84 28 chr17 50512668 50512691 -34925789 - MIR SINE MIR -39 223 203 640 293 67 0 chr17 50512691 50512855 -34925625 + MER5B DNA MER1_type 4 178 0 402 281 84 28 chr17 50512855 50513009 -34925471 - MIR SINE MIR -59 203 38 1380 199 70 14 chr17 50513193 50513343 -34925137 - AluJo SINE Alu -9 303 163 312 83 0 0 chr17 50513343 50513391 -34925089 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 2010 91 33 0 chr17 50513391 50513666 -34924814 - AluY SINE Alu -27 284 1 1380 199 70 14 chr17 50513666 50513801 -34924679 - AluJo SINE Alu -148 164 1 254 284 35 46 chr17 50513802 50513999 -34924481 + L1ME4a LINE L1 4255 4449 -1697 756 315 124 74 chr17 50514005 50514631 -34923849 + L1ME4a LINE L1 4527 5195 -951 2052 142 3 3 chr17 50514631 50514933 -34923547 + AluJb SINE Alu 1 302 -10 756 315 124 74 chr17 50514933 50515021 -34923459 + L1ME4a LINE L1 5195 5277 -869 647 275 124 40 chr17 50515053 50515144 -34923336 + L1ME4a LINE L1 5386 5468 -653 2105 125 20 0 chr17 50515144 50515449 -34923031 + AluSx SINE Alu 1 311 -1 647 275 124 40 chr17 50515449 50515826 -34922654 + L1ME4a LINE L1 5468 5893 -228 1616 183 24 7 chr17 50515827 50516122 -34922358 + AluJo SINE Alu 1 300 -12 2196 69 45 0 chr17 50516122 50516410 -34922070 + AluSx SINE Alu 1 303 -9 186 133 0 0 chr17 50516410 50516440 -34922040 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 2048 115 7 0 chr17 50516572 50516860 -34921620 + AluSq SINE Alu 1 290 -23 307 292 61 65 chr17 50516869 50517257 -34921223 + L1MC5 LINE L1 7499 7765 -196 28 61 0 0 chr17 50519094 50519143 -34919337 + AT_rich Low_complexity Low_complexity 1 49 0 323 340 109 7 chr17 50519145 50519292 -34919188 + L1MCa LINE L1 1930 2091 -4335 2210 120 0 0 chr17 50519396 50519697 -34918783 + AluSx SINE Alu 1 301 -11 2166 84 7 0 chr17 50519760 50520073 -34918407 + AluSp SINE Alu 1 315 0 946 229 76 8 chr17 50520119 50520355 -34918125 - MIR SINE MIR -10 252 1 415 304 30 15 chr17 50520355 50520483 -34917997 - MIR SINE MIR -97 165 36 2259 110 0 0 chr17 50523612 50523911 -34914569 + AluSx SINE Alu 1 299 -13 1762 146 4 21 chr17 50525589 50525869 -34912611 - AluJo SINE Alu -3 309 35 459 296 23 38 chr17 50526047 50526179 -34912301 - L2 LINE L2 -31 3241 3112 404 286 147 28 chr17 50526370 50526622 -34911858 - L2 LINE L2 -167 3105 2824 2149 133 0 0 chr17 50526684 50526992 -34911488 + AluSx SINE Alu 1 308 -4 320 194 265 0 chr17 50527052 50527150 -34911330 + MIR SINE MIR 110 233 -29 326 307 69 42 chr17 50529644 50529833 -34908647 - MIR3 SINE MIR -9 199 6 220 283 177 18 chr17 50530279 50530392 -34908088 + MIR3 SINE MIR 78 208 0 304 294 95 54 chr17 50531525 50531746 -34906734 - L1ME4a LINE L1 -1 6120 5891 352 309 32 16 chr17 50531827 50531953 -34906527 - L2 LINE L2 -236 3036 2909 2546 47 0 0 chr17 50532501 50532802 -34905678 + AluY SINE Alu 1 301 -10 333 286 42 8 chr17 50533325 50533444 -34905036 + MIR SINE MIR 24 146 -62 864 275 38 0 chr17 50533612 50533848 -34904632 - MIR SINE MIR 0 262 18 214 312 13 13 chr17 50534312 50534389 -34904091 - MIR SINE MIR -71 191 115 201 259 17 0 chr17 50534561 50534619 -34903861 + (CA)n Simple_repeat Simple_repeat 1 59 0 345 300 85 8 chr17 50535699 50535829 -34902651 + MIR SINE MIR 111 250 -12 359 265 78 9 chr17 50535894 50536032 -34902448 + MIR SINE MIR 31 177 -61 572 249 105 19 chr17 50536449 50536658 -34901822 - MIR SINE MIR 0 262 36 191 304 89 0 chr17 50536689 50536768 -34901712 - L2 LINE L2 -267 3005 2920 2141 119 0 0 chr17 50537246 50537540 -34900940 - AluSx SINE Alu -18 294 1 190 350 81 12 chr17 50537960 50538120 -34900360 + MIR3 SINE MIR 32 202 -6 2036 145 0 0 chr17 50540288 50540584 -34897896 + AluSx SINE Alu 1 296 -16 302 272 48 87 chr17 50540598 50540804 -34897676 - L2 LINE L2 -65 3248 3051 233 191 73 0 chr17 50540984 50541052 -34897428 - MLT1J LTR MaLR -362 149 77 287 283 101 0 chr17 50542639 50542738 -34895742 - MIR3 SINE MIR -19 189 81 186 43 0 0 chr17 50545492 50545515 -34892965 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 309 125 0 0 chr17 50546329 50546377 -34892103 - MIR SINE MIR -84 124 77 587 325 34 5 chr17 50547547 50547753 -34890727 + L2 LINE L2 3011 3222 -50 211 200 0 0 chr17 50547753 50547788 -34890692 + polypurine Low_complexity Low_complexity 3 37 0 305 239 77 37 chr17 50547894 50548031 -34890449 + MIR SINE MIR 51 187 -62 265 308 0 8 chr17 50548319 50548449 -34890031 + (TGAA)n Simple_repeat Simple_repeat 1 129 0 391 283 40 50 chr17 50549168 50549349 -34889131 + MIR SINE MIR 31 219 -43 2443 69 0 3 chr17 50549390 50549696 -34888784 - AluSq SINE Alu -8 305 1 317 286 119 57 chr17 50549719 50549903 -34888577 + L2 LINE L2 3006 3158 -114 1456 128 30 0 chr17 50549903 50550138 -34888342 - AluJo SINE Alu -70 242 1 317 286 119 57 chr17 50550138 50550259 -34888221 + L2 LINE L2 3158 3270 -2 503 250 157 6 chr17 50550822 50550998 -34887482 + MIR SINE MIR 4 195 -62 724 266 110 0 chr17 50551774 50551992 -34886488 - MIR SINE MIR 0 262 21 355 376 99 16 chr17 50552434 50552756 -34885724 + L2 LINE L2 2141 2489 -825 807 231 87 12 chr17 50552768 50553010 -34885470 + L2 LINE L2 2283 2542 -772 449 230 25 43 chr17 50553010 50553171 -34885309 + L1MC5 LINE L1 7721 7878 -83 315 146 0 0 chr17 50553292 50553347 -34885133 + (GGAGA)n Simple_repeat Simple_repeat 4 58 0 1341 231 87 10 chr17 50553401 50554079 -34884401 + L2 LINE L2 2582 3312 -1 2155 132 0 0 chr17 50554303 50554607 -34883873 - AluSx SINE Alu -8 304 1 798 266 38 17 chr17 50554777 50555014 -34883466 + MIR SINE MIR 15 256 -6 277 342 60 8 chr17 50555217 50555334 -34883146 + L2 LINE L2 3134 3256 -16 770 232 4 87 chr17 50555413 50555667 -34882813 + L2 LINE L2 3080 3312 -1 183 353 130 22 chr17 50555672 50555856 -34882624 - L2 LINE L2 -213 3059 2856 587 273 170 0 chr17 50556040 50556234 -34882246 - MIR SINE MIR 0 262 36 266 240 83 47 chr17 50556272 50556410 -34882070 - MIR3 SINE MIR -22 186 38 259 281 12 12 chr17 50556609 50556691 -34881789 + CT-rich Low_complexity Low_complexity 1 82 0 689 275 113 33 chr17 50557443 50557683 -34880797 + MIR SINE MIR 4 262 0 336 102 0 0 chr17 50557749 50557798 -34880682 + (CA)n Simple_repeat Simple_repeat 1 49 0 596 273 50 56 chr17 50558327 50558525 -34879955 - MIR3 SINE MIR -9 199 3 222 171 0 0 chr17 50558532 50558573 -34879907 + (TCCA)n Simple_repeat Simple_repeat 2 42 0 2475 50 0 3 chr17 50559295 50559594 -34878886 - AluY SINE Alu -13 298 1 198 171 24 0 chr17 50559627 50559668 -34878812 - MIR SINE MIR -114 148 107 757 168 0 16 chr17 50559676 50559801 -34878679 + FLAM_A SINE Alu 1 123 -10 2310 88 0 3 chr17 50559807 50560132 -34878348 + AluSx SINE Alu 1 324 0 180 0 0 0 chr17 50560135 50560155 -34878325 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2292 82 7 0 chr17 50560310 50560614 -34877866 + AluSp SINE Alu 1 306 -7 222 309 0 0 chr17 50561074 50561129 -34877351 + L2 LINE L2 3178 3232 -81 293 93 19 0 chr17 50561449 50561503 -34876977 + (CA)n Simple_repeat Simple_repeat 1 55 0 210 288 0 0 chr17 50561698 50561757 -34876723 + GA-rich Low_complexity Low_complexity 2 60 0 21 36 0 0 chr17 50562607 50562635 -34875845 + GC_rich Low_complexity Low_complexity 1 28 0 288 77 0 0 chr17 50562793 50562832 -34875648 + (TG)n Simple_repeat Simple_repeat 1 39 0 261 203 7 87 chr17 50562969 50563107 -34875373 + G-rich Low_complexity Low_complexity 6 132 0 214 211 240 29 chr17 50563250 50563354 -34875126 - L2 LINE L2 -1 3271 3146 324 120 0 0 chr17 50563658 50563708 -34874772 + (CA)n Simple_repeat Simple_repeat 1 50 0 270 341 63 16 chr17 50564121 50564247 -34874233 - MIR SINE MIR -45 217 86 2014 101 57 7 chr17 50564257 50564554 -34873926 + AluSx SINE Alu 1 312 0 229 363 98 51 chr17 50565686 50565920 -34872560 + L3 LINE CR1 1216 1460 -117 248 338 98 30 chr17 50569436 50569569 -34868911 + MIR SINE MIR 66 207 -55 439 247 88 44 chr17 50570004 50570186 -34868294 + L2 LINE L2 2856 3045 -227 387 0 0 0 chr17 50571144 50571187 -34867293 + (TG)n Simple_repeat Simple_repeat 1 43 0 1752 149 17 20 chr17 50571614 50571910 -34866570 - AluJb SINE Alu -17 295 1 668 208 35 0 chr17 50571921 50572065 -34866415 - MIR SINE MIR -14 248 100 202 225 0 0 chr17 50572207 50572247 -34866233 + (CA)n Simple_repeat Simple_repeat 2 41 0 1436 138 4 17 chr17 50574452 50574683 -34863797 + AluJb SINE Alu 85 312 0 359 324 75 52 chr17 50575928 50576234 -34862246 + L2 LINE L2 2937 3249 -23 272 367 50 0 chr17 50576339 50576459 -34862021 + L2 LINE L2 3173 3298 -15 237 279 292 16 chr17 50577036 50577409 -34861071 + L2 LINE L2 2132 2607 -707 226 310 56 0 chr17 50577793 50577864 -34860616 + L2 LINE L2 3236 3310 -3 308 270 20 27 chr17 50578636 50578784 -34859696 + GA-rich Low_complexity Low_complexity 2 148 0 227 247 32 43 chr17 50579586 50579679 -34858801 - MIR3 SINE MIR -3 205 114 22 35 0 0 chr17 50582096 50582125 -34856355 + GC_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr17 50582721 50582749 -34855731 + GC_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr17 50583262 50583301 -34855179 + GC_rich Low_complexity Low_complexity 1 39 0 22 35 0 0 chr17 50583662 50583691 -34854789 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr17 50583974 50584003 -34854477 + GC_rich Low_complexity Low_complexity 1 29 0 213 39 0 0 chr17 50584003 50584029 -34854451 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 446 313 28 7 chr17 50584434 50584578 -34853902 + MER5A DNA MER1_type 15 161 -28 269 278 0 14 chr17 50585181 50585253 -34853227 + C-rich Low_complexity Low_complexity 2 72 0 501 213 0 11 chr17 50586585 50586697 -34851783 + MIR SINE MIR 10 120 -88 200 283 163 0 chr17 50587287 50587379 -34851101 - MIR3 SINE MIR -9 199 93 341 290 56 0 chr17 50587388 50587495 -34850985 + MIR SINE MIR 20 132 -76 410 273 188 18 chr17 50587568 50587733 -34850747 + MIR SINE MIR 23 215 -47 2059 60 10 43 chr17 50588960 50589259 -34849221 + AluY SINE Alu 1 289 -22 276 148 62 49 chr17 50589375 50589416 -34849064 - L1MB3 LINE L1 -3 6180 6141 2345 58 0 7 chr17 50589416 50589730 -34848750 + AluY SINE Alu 1 311 0 276 148 62 49 chr17 50589730 50589769 -34848711 - L1MB3 LINE L1 -42 6141 6099 1888 275 30 27 chr17 50589869 50590091 -34848389 - L1MEc LINE L1 -4465 1931 1711 2202 117 3 0 chr17 50590091 50590399 -34848081 - AluSx SINE Alu -3 309 1 1888 275 30 27 chr17 50590399 50591033 -34847447 - L1MEc LINE L1 -4685 1711 1072 1064 96 0 0 chr17 50591060 50591196 -34847284 + AluSq/x SINE Alu 1 136 -176 287 287 34 24 chr17 50591237 50591449 -34847031 + L1MEc LINE L1 1137 1354 -5042 1821 132 4 0 chr17 50591555 50591813 -34846667 - AluSq SINE Alu -54 259 1 505 243 60 46 chr17 50591885 50592169 -34846311 - L1MEc LINE L1 -4052 2344 2057 586 202 86 20 chr17 50592232 50592345 -34846135 - L1MC3 LINE L1 0 7785 7673 1816 158 64 59 chr17 50592345 50592412 -34846068 - L1MB2 LINE L1 0 6171 6106 2081 144 0 3 chr17 50592412 50592725 -34845755 - AluSx SINE Alu 0 312 1 1816 158 64 59 chr17 50592725 50593082 -34845398 - L1MB2 LINE L1 -65 6106 5824 2119 125 0 3 chr17 50593082 50593393 -34845087 - AluSx SINE Alu -2 310 1 1816 158 64 59 chr17 50593393 50593479 -34845001 - L1MB2 LINE L1 -347 5824 5740 1728 144 7 3 chr17 50593479 50593784 -34844696 - L1MC3 LINE L1 -194 7591 7286 2084 132 0 3 chr17 50593784 50594087 -34844393 + AluSx SINE Alu 1 302 -10 567 155 10 0 chr17 50594107 50594255 -34844225 - AluSc SINE Alu 0 352 204 364 171 68 11 chr17 50594257 50594345 -34844135 - L1MC3 LINE L1 -503 7282 7190 275 277 12 0 chr17 50594345 50594428 -34844052 - MLT1F1 LTR MaLR -442 125 42 234 159 0 0 chr17 50594430 50594474 -34844006 - L1MC3 LINE L1 -684 7101 7058 2206 98 0 0 chr17 50594490 50594785 -34843695 + AluSc SINE Alu 1 295 -14 269 337 35 25 chr17 50594924 50595209 -34843271 + L1MEc LINE L1 2248 2535 -4052 1968 141 3 0 chr17 50595284 50595575 -34842905 + AluSx SINE Alu 1 292 -20 687 234 24 0 chr17 50595646 50595770 -34842710 + FLAM_A SINE Alu 1 127 -6 5732 133 141 85 chr17 50595784 50596068 -34842412 + L1MCa LINE L1 30 297 -6129 2298 100 0 13 chr17 50596068 50596368 -34842112 + AluSx SINE Alu 1 296 -16 5732 133 141 85 chr17 50596368 50596858 -34841622 + L1MCa LINE L1 297 758 -5668 2272 90 0 7 chr17 50596858 50597147 -34841333 + AluSx SINE Alu 1 287 -25 5732 133 141 85 chr17 50597147 50597834 -34840646 + L1MCa LINE L1 758 1589 -4837 1948 189 0 9 chr17 50597834 50598184 -34840296 + MER7A DNA MER2_type 2 346 0 5732 133 141 85 chr17 50598184 50598271 -34840209 + L1MCa LINE L1 1589 1670 -4756 * 6000 160 39 7 chr17 50598262 50599432 -34839048 + L1MC1 LINE L1 5010 6226 -107 2323 110 0 0 chr17 50599432 50599731 -34838749 - AluSq SINE Alu -14 299 1 6000 160 39 7 chr17 50599731 50599841 -34838639 + L1MC1 LINE L1 6226 6331 -2 2324 98 6 13 chr17 50600418 50600733 -34837747 + AluSq SINE Alu 1 313 0 2513 235 78 111 chr17 50601161 50602068 -34836412 + L1M4 LINE L1 1530 2465 -42 1709 188 29 0 chr17 50602068 50602371 -34836109 + AluJo SINE Alu 2 312 0 2513 235 78 111 chr17 50602371 50602547 -34835933 + L1M4 LINE L1 2465 2645 138 834 193 0 7 chr17 50602547 50602687 -34835793 - FLAM_C SINE Alu -4 139 1 2513 235 78 111 chr17 50602687 50602852 -34835628 + L1M4 LINE L1 2645 2814 307 2802 184 30 26 chr17 50602852 50603497 -34834983 + L1MB8 LINE L1 5526 6172 -6 2513 235 78 111 chr17 50603497 50603549 -34834931 + L1M4 LINE L1 2814 2866 359 2106 113 0 14 chr17 50603549 50603842 -34834638 - AluSx SINE Alu 0 312 24 2513 235 78 111 chr17 50603842 50604876 -34833604 + L1M4 LINE L1 2866 2214 -293 2128 135 3 0 chr17 50604876 50605165 -34833315 + AluSx SINE Alu 1 290 -22 2513 235 78 111 chr17 50605165 50605447 -34833033 + L1M4 LINE L1 2213 2503 -4 553 202 67 39 chr17 50605516 50605694 -34832786 + L1ME3A LINE L1 5047 5229 -917 711 132 0 0 chr17 50605694 50605808 -34832672 + (TTCC)n Simple_repeat Simple_repeat 1 114 0 1764 153 43 18 chr17 50605808 50606090 -34832390 - AluJb SINE Alu -22 290 2 2285 236 61 55 chr17 50606090 50606617 -34831863 + L1ME3A LINE L1 5222 5762 -408 1839 176 3 16 chr17 50606617 50606930 -34831550 + AluJb SINE Alu 1 309 -3 2285 236 61 55 chr17 50606930 50607304 -34831176 + L1ME3A LINE L1 5762 6132 -38 273 182 45 30 chr17 50607358 50607424 -34831056 + CT-rich Low_complexity Low_complexity 5 71 0 2162 133 0 0 chr17 50607727 50608027 -34830453 + AluSx SINE Alu 1 300 -12 890 215 57 10 chr17 50608157 50608366 -34830114 + L1MC4 LINE L1 6459 6677 -1365 1190 148 27 18 chr17 50608369 50608634 -34829846 - MLT2A2 LTR ERVL 0 453 284 * 1968 104 4 4 chr17 50608618 50608896 -34829584 - THE1B LTR MaLR -86 278 1 489 238 0 0 chr17 50608897 50608998 -34829482 - MLT1A2 LTR MaLR -273 101 1 2126 133 20 0 chr17 50609010 50609311 -34829169 - AluSx SINE Alu -5 307 1 301 211 158 32 chr17 50609311 50609406 -34829074 - L1MC4 LINE L1 -866 7176 7070 410 59 24 59 chr17 50609407 50609492 -34828988 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 419 184 27 0 chr17 50609494 50609587 -34828893 - L1MC4 LINE L1 -1006 7005 6902 1638 180 48 35 chr17 50609587 50609960 -34828520 + MLT1B LTR MaLR 1 378 -12 1151 182 21 55 chr17 50609972 50610208 -34828272 - L1MC4 LINE L1 -1113 6929 6702 * 9178 103 38 7 chr17 50610199 50610320 -34828160 + THE1B-int LTR MaLR 146 262 -1318 2459 93 0 3 chr17 50610320 50610630 -34827850 - AluY SINE Alu -2 309 1 9178 103 38 7 chr17 50610630 50611861 -34826619 + THE1B-int LTR MaLR 262 1540 -40 1156 184 89 38 chr17 50611861 50611901 -34826579 + MLT1A1 LTR MaLR 58 95 -270 2393 126 3 8 chr17 50611901 50612267 -34826213 + THE1B LTR MaLR 1 364 0 1156 184 89 38 chr17 50612267 50612519 -34825961 + MLT1A1 LTR MaLR 95 365 0 1671 210 59 69 chr17 50612519 50612588 -34825892 + L1MC4 LINE L1 7110 7178 -630 2290 111 0 17 chr17 50612588 50612885 -34825595 + AluSx SINE Alu 1 292 -20 1671 210 59 69 chr17 50612885 50613524 -34824956 + L1MC4 LINE L1 7178 7808 0 1231 286 111 48 chr17 50613625 50613838 -34824642 + MLT1K LTR MaLR 14 212 -376 2193 112 20 0 chr17 50613838 50614133 -34824347 - AluSx SINE Alu -10 302 2 1231 286 111 48 chr17 50614133 50614458 -34824022 + MLT1K LTR MaLR 212 586 -2 499 275 6 31 chr17 50614894 50615054 -34823426 - MIR SINE MIR -87 175 20 610 278 66 16 chr17 50615280 50615515 -34822965 - MIR SINE MIR -1 261 4 204 233 137 0 chr17 50615515 50615586 -34822894 - L2 LINE L2 -30 3242 3162 189 214 45 56 chr17 50615991 50616080 -34822400 - L2 LINE L2 -616 2698 2611 520 288 29 24 chr17 50616186 50616356 -34822124 + MIR SINE MIR 17 187 -75 245 280 112 0 chr17 50616487 50616594 -34821886 + MIR SINE MIR 48 166 -96 1642 182 6 47 chr17 50617672 50617990 -34820490 - AluJb SINE Alu -6 306 2 1830 169 11 0 chr17 50619179 50619458 -34819022 + AluJo SINE Alu 1 282 -30 264 59 0 0 chr17 50619462 50619496 -34818984 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 335 254 88 0 chr17 50619887 50620002 -34818478 - HERV16 LTR ERVL -2066 3436 3295 947 264 121 18 chr17 50620076 50620502 -34817978 - HERV16 LTR ERVL -1907 3089 2714 2422 106 0 0 chr17 50620503 50620815 -34817665 + AluSx SINE Alu 1 312 0 1858 190 11 13 chr17 50621125 50621499 -34816981 + L1MD3 LINE L1 7618 7990 -5 2287 114 0 3 chr17 50622512 50622819 -34815661 + AluSx SINE Alu 1 306 -6 927 183 10 39 chr17 50623266 50623474 -34815006 + MIR SINE MIR 46 247 -15 2369 94 0 7 chr17 50623805 50624104 -34814376 - AluSq SINE Alu -16 297 1 265 296 26 52 chr17 50624242 50624357 -34814123 + MIR SINE MIR 81 192 -70 799 223 54 0 chr17 50624603 50624787 -34813693 + MIR SINE MIR 37 230 -32 290 148 15 89 chr17 50625563 50625648 -34812832 - MIR3 SINE MIR -40 168 93 455 267 47 7 chr17 50627476 50627626 -34810854 + MIR3 SINE MIR 51 206 -2 233 263 62 12 chr17 50628250 50628330 -34810150 - MIR SINE MIR -103 159 76 364 310 158 33 chr17 50628536 50629306 -34809174 + L2 LINE L2 2434 3310 -3 311 269 27 47 chr17 50629960 50630109 -34808371 + GA-rich Low_complexity Low_complexity 5 150 0 2230 114 3 13 chr17 50630204 50630519 -34807961 - AluSq SINE Alu -1 312 1 571 326 96 12 chr17 50631202 50631784 -34806696 + L2 LINE L2 1752 2382 -932 195 129 0 0 chr17 50631788 50631819 -34806661 + (GGGA)n Simple_repeat Simple_repeat 2 32 0 182 61 0 30 chr17 50637176 50637209 -34801271 + (CTGGGG)n Simple_repeat Simple_repeat 3 34 0 2166 207 122 15 chr17 50637735 50638324 -34800156 - L1MC4 LINE L1 0 8042 7391 406 228 70 26 chr17 50642995 50643109 -34795371 + MIR SINE MIR 33 151 -57 2351 109 0 3 chr17 50643112 50643423 -34795057 + AluSg SINE Alu 1 310 0 183 100 0 0 chr17 50651617 50651647 -34786833 + (A)n Simple_repeat Simple_repeat 1 30 0 204 40 0 0 chr17 50652393 50652418 -34786062 + (T)n Simple_repeat Simple_repeat 1 25 0 186 43 0 0 chr17 50653605 50653628 -34784852 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 238 180 33 16 chr17 50653643 50653704 -34784776 + CT-rich Low_complexity Low_complexity 2 63 0 2079 145 0 0 chr17 50654170 50654474 -34784006 - AluSx SINE Alu -8 304 1 665 290 32 5 chr17 50655179 50655365 -34783115 + MER3 DNA MER1_type 15 205 -4 432 199 16 119 chr17 50657108 50657190 -34781290 - MER33 DNA MER1_type -2261 363 274 2224 102 0 16 chr17 50657190 50657503 -34780977 + AluSx SINE Alu 1 308 -4 432 199 16 119 chr17 50657503 50657523 -34780957 - MER33 DNA MER1_type -2350 274 254 1455 176 34 11 chr17 50657523 50657785 -34780695 + AluJo SINE Alu 29 296 -16 432 199 16 119 chr17 50657785 50657969 -34780511 - MER33 DNA MER1_type -2370 254 1 698 208 0 0 chr17 50659331 50659456 -34779024 + FLAM_A SINE Alu 3 127 -6 184 274 20 0 chr17 50659489 50659540 -34778940 - L2 LINE L2 0 3313 3262 339 239 35 18 chr17 50659673 50659786 -34778694 - L2 LINE L2 -250 3063 2949 2349 95 3 0 chr17 50660217 50660523 -34777957 - AluSx SINE Alu -5 307 1 537 236 13 38 chr17 50660670 50660827 -34777653 + MIR SINE MIR 34 186 -76 1887 97 97 21 chr17 50661797 50662087 -34776393 + AluSx SINE Alu 1 312 0 485 209 202 0 chr17 50662114 50662243 -34776237 + MIR SINE MIR 9 163 -99 948 121 0 0 chr17 50662247 50662379 -34776101 + AluSq/x SINE Alu 1 132 -181 366 298 11 0 chr17 50662384 50662478 -34776002 + MIR SINE MIR 157 251 -11 1806 143 16 16 chr17 50662549 50662857 -34775623 - AluJo SINE Alu -4 308 1 926 153 43 43 chr17 50664255 50664418 -34774062 + FRAM SINE Alu 1 163 -3 379 272 125 0 chr17 50665593 50665729 -34772751 - MIR3 SINE MIR -19 189 37 1730 141 11 25 chr17 50665817 50666094 -34772386 - AluJb SINE Alu -17 295 23 563 265 175 14 chr17 50666863 50667086 -34771394 + MIR SINE MIR 2 260 -2 288 0 0 0 chr17 50667447 50667479 -34771001 + (TG)n Simple_repeat Simple_repeat 2 33 0 428 198 11 0 chr17 50669819 50670100 -34768380 + (TG)n Simple_repeat Simple_repeat 1 284 0 249 98 0 0 chr17 50670214 50670255 -34768225 + (TG)n Simple_repeat Simple_repeat 1 41 0 202 213 21 0 chr17 50670884 50670931 -34767549 + GA-rich Low_complexity Low_complexity 3 50 0 521 310 120 35 chr17 50670941 50671562 -34766918 + L2 LINE L2 2576 3243 -29 352 331 72 0 chr17 50671770 50671909 -34766571 + MIR SINE MIR 65 213 -49 241 292 229 0 chr17 50671897 50671993 -34766487 - L2 LINE L2 -8 3305 3188 * 575 267 18 55 chr17 50672010 50672175 -34766305 - MIR SINE MIR -34 228 70 816 193 148 58 chr17 50673167 50673490 -34764990 - L1MC5 LINE L1 -76 7885 7522 1652 106 173 0 chr17 50673490 50673745 -34764735 - AluSx SINE Alu -13 299 1 816 193 148 58 chr17 50673745 50673800 -34764680 - L1MC5 LINE L1 -439 7522 7473 951 117 0 28 chr17 50673804 50674026 -34764454 + (TTCC)n Simple_repeat Simple_repeat 1 215 0 1011 226 51 106 chr17 50674026 50674677 -34763803 - L1MC5 LINE L1 -467 7494 6880 193 138 0 0 chr17 50674956 50674985 -34763495 + L2 LINE L2 3244 3272 0 2191 87 17 10 chr17 50676071 50676369 -34762111 + AluSg SINE Alu 1 300 -10 1364 313 77 23 chr17 50676375 50677414 -34761066 + L1ME3 LINE L1 4180 5274 -872 1280 128 0 5 chr17 50677415 50677602 -34760878 + AluSp SINE Alu 116 301 -12 1003 186 0 6 chr17 50677663 50677840 -34760640 - AluJ SINE Alu -12 300 125 320 130 58 58 chr17 50677840 50677909 -34760571 - L1MC4 LINE L1 -1334 6708 6640 798 201 0 0 chr17 50677914 50678048 -34760432 - AluJ SINE Alu -178 134 1 1305 249 160 12 chr17 50678084 50678602 -34759878 + MLT1L LTR MaLR 4 598 -17 731 284 96 32 chr17 50678615 50678985 -34759495 + L1ME3 LINE L1 5326 5671 -491 2234 125 0 0 chr17 50678985 50679297 -34759183 + AluSx SINE Alu 1 312 0 731 284 96 32 chr17 50679297 50679467 -34759013 + L1ME3 LINE L1 5671 5850 -312 1843 143 24 3 chr17 50679467 50679754 -34758726 - AluJo SINE Alu -16 296 4 731 284 96 32 chr17 50679754 50679792 -34758688 + L1ME3 LINE L1 5850 5884 -278 413 301 7 52 chr17 50679995 50680131 -34758349 - L1ME LINE L1 -5127 943 814 569 75 47 140 chr17 50680134 50680241 -34758239 - AluSq SINE Alu -153 160 64 717 115 0 0 chr17 50680248 50680344 -34758136 + AluSg/x SINE Alu 166 261 -51 361 329 64 31 chr17 50680415 50681064 -34757416 - L1M4c LINE L1 -4756 1459 810 2418 258 99 0 chr17 50681152 50681984 -34756496 - L1MC4 LINE L1 -136 7649 6912 2943 183 20 14 chr17 50681984 50682471 -34756009 - L1MB8 LINE L1 0 6178 5696 15323 125 18 30 chr17 50682471 50682589 -34755891 - Tigger1 DNA MER2_type 0 2418 2300 2200 112 0 0 chr17 50682589 50682885 -34755595 + AluSx SINE Alu 1 296 -16 15323 125 18 30 chr17 50682885 50682961 -34755519 - Tigger1 DNA MER2_type -118 2300 2225 840 66 29 7 chr17 50682961 50683097 -34755383 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 15323 125 18 30 chr17 50683097 50684189 -34754291 - Tigger1 DNA MER2_type -193 2225 1121 1887 157 3 3 chr17 50684189 50684488 -34753992 - AluSx SINE Alu -11 301 3 15323 125 18 30 chr17 50684488 50684692 -34753788 - Tigger1 DNA MER2_type -1297 1121 916 2342 80 0 26 chr17 50684692 50685004 -34753476 + AluSc SINE Alu 3 306 -3 15323 125 18 30 chr17 50685004 50685959 -34752521 - Tigger1 DNA MER2_type -1502 916 1 2943 183 20 14 chr17 50685959 50686056 -34752424 - L1MB8 LINE L1 -482 5696 5590 2418 258 99 0 chr17 50686056 50686199 -34752281 - L1MC4 LINE L1 -873 6912 6786 2259 96 3 0 chr17 50686199 50686501 -34751979 + AluSp SINE Alu 5 307 -6 2418 258 99 0 chr17 50686501 50686550 -34751930 - L1MC4 LINE L1 -999 6786 6744 2069 112 3 10 chr17 50686550 50686846 -34751634 + AluSc SINE Alu 2 295 -14 2418 258 99 0 chr17 50686846 50686964 -34751516 - L1MC4 LINE L1 -1041 6744 6664 871 172 0 26 chr17 50687015 50687166 -34751314 - AluJo SINE Alu -165 147 1 243 177 6 223 chr17 50687176 50687291 -34751189 - L1MC4 LINE L1 -1418 6624 6558 1762 206 0 3 chr17 50687291 50687601 -34750879 - AluJb SINE Alu -1 311 3 243 177 6 223 chr17 50687601 50687660 -34750820 - L1MC4 LINE L1 -1484 6558 6488 1722 136 163 68 chr17 50687688 50688100 -34750380 - LTR47A LTR ERVL 0 452 2 408 231 7 14 chr17 50688792 50688935 -34749545 + GA-rich Low_complexity Low_complexity 2 143 0 487 278 10 98 chr17 50690545 50690622 -34747858 - MIR SINE MIR -50 212 130 1575 178 18 7 chr17 50690622 50690908 -34747572 - AluJo SINE Alu -23 289 1 487 278 10 98 chr17 50690908 50691024 -34747456 - MIR SINE MIR -132 130 36 391 188 25 0 chr17 50691581 50691661 -34746819 - MIR3 SINE MIR -48 160 79 245 294 11 0 chr17 50693423 50693515 -34744965 - L2 LINE L2 -270 3002 2910 550 385 86 8 chr17 50693590 50693849 -34744631 - L2 LINE L2 -609 2705 2403 267 103 0 0 chr17 50693849 50693888 -34744592 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 550 385 86 8 chr17 50693888 50694023 -34744457 - L2 LINE L2 -911 2403 2280 207 298 16 25 chr17 50694211 50694332 -34744148 + CT-rich Low_complexity Low_complexity 3 122 0 257 337 100 47 chr17 50694590 50694949 -34743531 - L2 LINE L2 -91 3181 2804 216 0 0 0 chr17 50695029 50695053 -34743427 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 236 330 124 0 chr17 50695062 50695159 -34743321 - L2 LINE L2 -30 3242 3134 211 208 42 0 chr17 50695246 50695294 -34743186 + L2 LINE L2 3138 3187 -85 315 278 130 0 chr17 50695828 50695936 -34742544 + MER94 DNA DNA 11 132 -2 278 26 26 0 chr17 50695994 50696033 -34742447 + (GA)n Simple_repeat Simple_repeat 1 40 0 334 326 14 0 chr17 50696301 50696445 -34742035 + GA-rich Low_complexity Low_complexity 2 147 0 183 100 0 0 chr17 50697280 50697310 -34741170 + (TG)n Simple_repeat Simple_repeat 2 31 0 183 156 0 0 chr17 50698279 50698311 -34740169 + (CA)n Simple_repeat Simple_repeat 1 32 0 309 296 0 10 chr17 50698391 50698489 -34739991 + C-rich Low_complexity Low_complexity 3 99 0 182 295 0 16 chr17 50701475 50701536 -34736944 - L2 LINE L2 -258 3055 2996 309 251 134 91 chr17 50702324 50702511 -34735969 - MIR SINE MIR 0 262 68 265 299 71 31 chr17 50702844 50702971 -34735509 + MIR3 SINE MIR 52 183 -25 1993 152 0 22 chr17 50703590 50703906 -34734574 - AluJo SINE Alu -3 309 1 722 137 18 160 chr17 50703907 50704011 -34734469 + MER53 DNA DNA 2 61 -128 1779 142 20 4 chr17 50704011 50704265 -34734215 + AluSx SINE Alu 3 260 -52 722 137 18 160 chr17 50704265 50704379 -34734101 + MER53 DNA DNA 61 189 0 207 261 0 15 chr17 50704949 50705014 -34733466 + GA-rich Low_complexity Low_complexity 1 64 0 2047 78 48 7 chr17 50706222 50706518 -34731962 - AluSx SINE Alu 0 309 3 208 310 0 14 chr17 50707720 50707791 -34730689 - MIR SINE MIR -74 188 119 23 0 0 0 chr17 50708080 50708103 -34730377 + AT_rich Low_complexity Low_complexity 1 23 0 2373 92 23 0 chr17 50708110 50708413 -34730067 + AluSg SINE Alu 1 310 0 680 169 0 8 chr17 50708416 50708534 -34729946 - AluJo/FLAM SINE Alu -194 118 2 421 254 143 42 chr17 50709002 50709191 -34729289 - L2 LINE L2 -61 3252 3045 470 343 22 0 chr17 50711801 50711979 -34726501 + L3 LINE CR1 1372 1553 -24 236 303 0 0 chr17 50713510 50713576 -34724904 - L2 LINE L2 -6 3266 3201 22 35 0 0 chr17 50713828 50713857 -34724623 + AT_rich Low_complexity Low_complexity 1 29 0 391 113 25 0 chr17 50714384 50714464 -34724016 + (TGAA)n Simple_repeat Simple_repeat 3 84 0 2161 114 7 0 chr17 50714873 50715184 -34723296 + AluSx SINE Alu 1 313 0 1420 299 204 22 chr17 50715218 50716916 -34721564 + L2 LINE L2 741 2748 -566 652 60 0 0 chr17 50716916 50716999 -34721481 + AluSg/x SINE Alu 210 292 -20 1374 111 3 171 chr17 50717009 50717359 -34721121 + AluJo SINE Alu 1 291 -11 292 333 48 14 chr17 50717378 50717585 -34720895 + L2 LINE L2 2764 2977 -337 220 200 80 0 chr17 50717636 50717711 -34720769 - L2 LINE L2 -308 2964 2884 650 216 0 0 chr17 50717741 50717866 -34720614 + FAM SINE Alu 1 125 -60 979 98 0 15 chr17 50717891 50718023 -34720457 + AluJo SINE Alu 5 134 -178 619 200 6 62 chr17 50718057 50718256 -34720224 - MLT1C LTR MaLR -7 460 196 481 205 16 8 chr17 50718256 50718383 -34720097 + CT-rich Low_complexity Low_complexity 3 130 0 1107 169 0 11 chr17 50718407 50718585 -34719895 - FRAM SINE Alu 0 176 1 389 268 48 36 chr17 50718589 50718757 -34719723 - MLT1C LTR MaLR -287 218 49 458 236 51 13 chr17 50718940 50719097 -34719383 - MER103 DNA DNA -2 164 2 253 306 45 36 chr17 50719177 50719288 -34719192 - MIR SINE MIR -55 153 42 504 297 103 41 chr17 50719324 50719521 -34718959 + L1MD2 LINE L1 6006 6189 -170 2099 134 10 0 chr17 50719521 50719819 -34718661 + AluSq SINE Alu 1 301 -12 504 297 103 41 chr17 50719819 50719851 -34718629 + L1MD2 LINE L1 6189 6218 -141 1623 152 27 74 chr17 50719851 50720147 -34718333 + AluJo SINE Alu 11 292 -20 504 297 103 41 chr17 50720147 50720236 -34718244 + L1MD2 LINE L1 6218 6345 -14 1665 155 0 0 chr17 50720363 50720602 -34717878 + AluJb SINE Alu 1 239 -73 498 247 50 97 chr17 50720801 50721060 -34717420 + MLT1K LTR MaLR 180 426 -162 182 36 0 36 chr17 50721188 50721216 -34717264 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1790 155 7 24 chr17 50721218 50721509 -34716971 - AluJb SINE Alu -24 288 3 302 175 16 16 chr17 50721514 50721577 -34716903 + MLT1K LTR MaLR 518 580 -8 287 351 35 0 chr17 50721586 50721700 -34716780 - MIR3 SINE MIR -51 157 40 1871 146 6 61 chr17 50723540 50723868 -34714612 - AluJo SINE Alu 0 312 3 1991 133 0 32 chr17 50724144 50724453 -34714027 + AluJb SINE Alu 1 299 -13 703 165 0 0 chr17 50724496 50724605 -34713875 + AluJo/FLAM SINE Alu 2 110 -202 423 261 8 0 chr17 50724603 50724722 -34713758 + FLAM_A SINE Alu 21 140 -2 * 943 165 21 107 chr17 50724832 50725009 -34713471 + Charlie4 DNA MER1_type 25 177 -1784 845 219 0 24 chr17 50725009 50725178 -34713302 - FRAM SINE Alu -1 165 1 943 165 21 107 chr17 50725178 50725243 -34713237 + Charlie4 DNA MER1_type 177 246 -1715 2197 120 3 0 chr17 50725250 50725550 -34712930 + AluSx SINE Alu 1 301 -11 416 141 0 0 chr17 50725560 50725624 -34712856 + Charlie4 DNA MER1_type 1883 1946 -15 23 0 0 0 chr17 50725624 50725647 -34712833 + AT_rich Low_complexity Low_complexity 1 23 0 3754 211 34 5 chr17 50725732 50726620 -34711860 + L1 LINE L1 2190 3103 -3043 339 143 4 42 chr17 50726634 50726718 -34711762 + AluSc SINE Alu 233 299 0 427 241 58 105 chr17 50726718 50726836 -34711644 + L1 LINE L1 3087 3194 -2952 1917 123 0 4 chr17 50726836 50727088 -34711392 - AluSq SINE Alu -62 251 1 427 241 58 105 chr17 50727088 50727160 -34711320 + L1 LINE L1 3194 3268 -2878 733 217 34 193 chr17 50727573 50727725 -34710755 - L2 LINE L2 0 3313 3139 1699 175 4 7 chr17 50727725 50728005 -34710475 + AluSx SINE Alu 21 299 -13 733 217 34 193 chr17 50728005 50728387 -34710093 - L2 LINE L2 -174 3139 2864 1913 173 7 0 chr17 50728406 50728713 -34709767 + AluJb SINE Alu 1 309 -3 270 238 82 41 chr17 50728954 50729076 -34709404 + MIR SINE MIR 20 146 -62 2347 100 0 0 chr17 50729299 50729589 -34708891 - AluSc SINE Alu -19 290 1 1775 154 50 7 chr17 50729979 50730278 -34708202 + AluJo SINE Alu 1 312 0 227 228 89 79 chr17 50730314 50730415 -34708065 - MIR3 SINE MIR -17 191 90 392 247 11 0 chr17 50730519 50730612 -34707868 + MER5A DNA MER1_type 12 105 -84 2183 114 19 3 chr17 50730754 50731062 -34707418 - AluSq SINE Alu 0 313 1 226 207 0 0 chr17 50731095 50731153 -34707327 - HAL1b LINE L1 -17 1331 1274 2316 117 0 0 chr17 50731200 50731498 -34706982 - AluSx SINE Alu -14 298 1 968 151 20 0 chr17 50731555 50731701 -34706779 - AluJb SINE Alu -4 308 160 337 179 24 0 chr17 50731718 50731802 -34706678 + (TA)n Simple_repeat Simple_repeat 1 86 0 772 167 0 8 chr17 50731802 50731934 -34706546 - FLAM_C SINE Alu -2 131 1 1208 124 6 6 chr17 50731948 50732126 -34706354 - AluSg/x SINE Alu -4 306 129 313 266 9 44 chr17 50732472 50732585 -34705895 + L2 LINE L2 3163 3271 -1 2134 135 3 3 chr17 50732795 50733092 -34705388 + AluSx SINE Alu 1 297 -15 416 103 0 15 chr17 50733346 50733414 -34705066 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 228 277 76 34 chr17 50733607 50733726 -34704754 - L2 LINE L2 -9 3263 3140 2128 147 0 10 chr17 50733845 50734159 -34704321 - AluSx SINE Alu -1 311 1 357 370 43 8 chr17 50734165 50734400 -34704080 + L2 LINE L2 2733 2975 -339 211 214 0 0 chr17 50734482 50734524 -34703956 + L2 LINE L2 3262 3303 -10 211 244 0 0 chr17 50734949 50734990 -34703490 - L2 LINE L2 -27 3286 3246 1399 146 24 5 chr17 50734996 50735209 -34703271 - AluJo SINE Alu -11 301 85 351 0 0 0 chr17 50735267 50735306 -34703174 + (TG)n Simple_repeat Simple_repeat 2 40 0 1965 172 0 0 chr17 50735738 50736041 -34702439 + AluSx SINE Alu 1 303 -9 2282 105 10 0 chr17 50736349 50736653 -34701827 - AluSg SINE Alu -3 307 1 308 299 87 8 chr17 50736681 50736808 -34701672 - MIR SINE MIR -102 160 24 183 42 0 0 chr17 50738006 50738030 -34700450 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1564 128 25 116 chr17 50738032 50738352 -34700128 - AluYb8 SINE Alu -25 293 3 1562 197 31 0 chr17 50738448 50738773 -34699707 - L1MC2 LINE L1 -1 6343 6009 2328 98 7 3 chr17 50739151 50739448 -34699032 + AluSg SINE Alu 1 298 -12 579 143 0 50 chr17 50739589 50739708 -34698772 - FLAM_C SINE Alu -4 139 27 1959 150 0 29 chr17 50739749 50740062 -34698418 - AluJb SINE Alu -8 304 1 2160 166 76 78 chr17 50740505 50740852 -34697628 + MER34B LTR ERV1 1 348 -217 2217 132 3 0 chr17 50740852 50741163 -34697317 + AluSx SINE Alu 1 312 0 2160 166 76 78 chr17 50741163 50741381 -34697099 + MER34B LTR ERV1 348 565 0 391 307 8 24 chr17 50741543 50741670 -34696810 + LTR16A LTR ERVL 97 221 -229 753 210 84 54 chr17 50741674 50742011 -34696469 + MER93b LTR ERV1 1 222 -151 618 191 22 96 chr17 50742072 50742211 -34696269 + MER93b LTR ERV1 208 333 -40 2212 92 0 46 chr17 50742211 50742367 -34696113 - AluSx SINE Alu -23 289 152 2347 100 0 0 chr17 50742367 50742668 -34695812 - AluY SINE Alu -9 302 2 2212 92 0 46 chr17 50742668 50742814 -34695666 - AluSx SINE Alu -160 152 1 618 191 22 96 chr17 50742814 50742852 -34695628 + MER93b LTR ERV1 333 372 -1 319 275 84 0 chr17 50742868 50742999 -34695481 + LTR16A LTR ERVL 304 445 -5 830 264 74 20 chr17 50743294 50743665 -34694815 - MER110A LTR ERV1 0 468 36 405 259 123 41 chr17 50743729 50743972 -34694508 + MLT1K LTR MaLR 203 465 -123 1771 183 3 10 chr17 50744289 50744590 -34693890 + AluJo SINE Alu 1 299 -13 796 196 18 61 chr17 50745039 50745268 -34693212 - MER20 DNA MER1_type 0 219 1 611 291 153 0 chr17 50745509 50745784 -34692696 - LTR33 LTR ERVL -51 470 154 309 358 20 7 chr17 50745861 50746009 -34692471 + L1ME3A LINE L1 5788 5937 -233 2039 119 3 17 chr17 50746093 50746395 -34692085 + AluJb SINE Alu 1 298 -14 227 297 117 18 chr17 50746913 50747024 -34691456 + L3 LINE CR1 263 384 -1193 1655 123 127 0 chr17 50747363 50747631 -34690849 - AluJb SINE Alu -10 302 1 997 121 0 0 chr17 50748728 50748860 -34689620 - FLAM_C SINE Alu 0 133 2 180 0 0 0 chr17 50748860 50748880 -34689600 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 1814 168 11 7 chr17 50748880 50749165 -34689315 - AluJo SINE Alu -26 286 1 240 283 42 25 chr17 50749171 50749291 -34689189 - MLT1K LTR MaLR -12 576 455 * 379 308 43 38 chr17 50749289 50749474 -34689006 - MLT1K LTR MaLR -28 560 375 808 291 21 85 chr17 50749508 50749944 -34688536 + LTR16A LTR ERVL 33 440 -10 5648 279 105 68 chr17 50750009 50751254 -34687226 + HERV16 LTR ERVL 101 1299 -3697 4335 77 15 0 chr17 50751254 50751800 -34686680 - MER41A LTR ERV1 0 554 1 5648 279 105 68 chr17 50751800 50751923 -34686557 + HERV16 LTR ERVL 1299 1416 -3580 833 150 0 24 chr17 50751923 50752050 -34686430 - AluSq/x SINE Alu -184 129 6 5648 279 105 68 chr17 50752050 50752116 -34686364 + HERV16 LTR ERVL 1416 1478 -3518 2092 95 3 3 chr17 50752116 50752429 -34686051 - AluSp SINE Alu 0 313 1 5648 279 105 68 chr17 50752429 50752818 -34685662 + HERV16 LTR ERVL 1478 1851 -3145 2008 110 4 0 chr17 50752818 50753130 -34685350 - AluSx SINE Alu 0 313 1 5648 279 105 68 chr17 50753130 50753602 -34684878 + HERV16 LTR ERVL 1851 2304 -2692 1084 169 112 72 chr17 50753602 50753796 -34684684 + MER2 DNA MER2_type 1 215 -129 2095 128 0 28 chr17 50753796 50754117 -34684363 - AluSx SINE Alu 0 312 1 1084 169 112 72 chr17 50754117 50754253 -34684227 + MER2 DNA MER2_type 215 344 0 5648 279 105 68 chr17 50754253 50754549 -34683931 + HERV16 LTR ERVL 2304 2588 -2408 1987 79 30 0 chr17 50754549 50754815 -34683665 - AluY SINE Alu 0 311 38 5648 279 105 68 chr17 50754815 50754980 -34683500 + HERV16 LTR ERVL 2588 3096 -1900 360 280 19 0 chr17 50754997 50755104 -34683376 + MER34 LTR ERV1 1 109 -433 263 224 12 47 chr17 50755097 50755182 -34683298 + LTR29 LTR ERV1 137 218 -404 * 552 314 37 16 chr17 50755182 50755370 -34683110 - HERV16 LTR ERVL -2129 2867 2676 1631 87 13 26 chr17 50755387 50755491 -34682989 - MER30 DNA MER1_type 0 230 126 2137 101 3 0 chr17 50755491 50755788 -34682692 + AluSx SINE Alu 1 298 -14 1631 87 13 26 chr17 50755788 50755913 -34682567 - MER30 DNA MER1_type -104 126 4 1073 207 166 33 chr17 50755915 50756354 -34682126 + LTR48B LTR ERV1 109 571 -24 609 355 0 0 chr17 50756379 50756596 -34681884 + HERV16 LTR ERVL 3111 3327 -2327 1233 208 14 104 chr17 50756608 50756973 -34681507 - MLT2B3 LTR ERVL 0 554 223 557 225 75 0 chr17 50756976 50757096 -34681384 + FLAM_C SINE Alu 5 133 0 1762 159 0 7 chr17 50757108 50757397 -34681083 + AluJb SINE Alu 3 289 -23 26 30 0 0 chr17 50757397 50757430 -34681050 + AT_rich Low_complexity Low_complexity 1 33 0 292 329 7 29 chr17 50757488 50757625 -34680855 + HERV16 LTR ERVL 3214 3347 -1649 539 211 0 19 chr17 50757719 50757823 -34680657 + MLT2B2 LTR ERVL 259 360 -155 276 241 0 0 chr17 50757827 50757885 -34680595 - MLT2B3 LTR ERVL -145 409 352 532 309 38 4 chr17 50757949 50758185 -34680295 + HERV16 LTR ERVL 3760 4003 -1651 197 354 15 0 chr17 50758397 50758462 -34680018 - L3 LINE CR1 -97 1480 1415 2135 114 16 0 chr17 50758584 50758891 -34679589 - AluSx SINE Alu 0 312 1 1837 142 4 0 chr17 50759309 50759612 -34678868 - AluSx SINE Alu 0 304 1 21 0 0 0 chr17 50759672 50759693 -34678787 + AT_rich Low_complexity Low_complexity 1 21 0 493 233 10 0 chr17 50759993 50760096 -34678384 - FRAM SINE Alu -7 169 66 641 74 0 0 chr17 50760156 50760237 -34678243 + AluSg/x SINE Alu 211 291 -18 944 73 16 0 chr17 50761409 50761533 -34676947 - AluJb SINE Alu -148 164 39 396 294 9 18 chr17 50761535 50761644 -34676836 + L2 LINE L2 3205 3312 -1 316 306 161 42 chr17 50762270 50762655 -34675825 + L2 LINE L2 2805 3253 -60 1369 212 18 3 chr17 50762655 50762938 -34675542 + AluJo SINE Alu 3 289 -23 316 306 161 42 chr17 50762938 50763006 -34675474 + L2 LINE L2 3253 3312 -1 1834 159 3 10 chr17 50763647 50763956 -34674524 - AluJo SINE Alu -5 307 1 1394 151 0 0 chr17 50764552 50764764 -34673716 + AluJb SINE Alu 85 296 -16 2138 120 3 0 chr17 50765088 50765389 -34673091 + AluSx SINE Alu 1 302 -10 506 376 45 37 chr17 50765673 50766206 -34672274 + HAL1b LINE L1 42 402 -946 1558 169 61 3 chr17 50766239 50766534 -34671946 - AluSx SINE Alu 0 312 1 2396 72 0 3 chr17 50766569 50766873 -34671607 - AluSc SINE Alu -6 303 1 23 54 0 0 chr17 50766873 50766910 -34671570 + AT_rich Low_complexity Low_complexity 1 37 0 281 99 27 0 chr17 50766994 50767047 -34671433 + FRAM SINE Alu 60 97 -69 233 67 0 0 chr17 50767158 50767188 -34671292 - Alu SINE Alu -265 37 8 1154 148 0 0 chr17 50767194 50767363 -34671117 - AluJo/FRAM SINE Alu -10 302 134 1529 168 54 47 chr17 50767364 50767662 -34670818 - AluJb SINE Alu -8 304 5 228 179 0 0 chr17 50767710 50767749 -34670731 + MER112 DNA MER1_type 222 260 0 238 308 50 38 chr17 50767766 50767925 -34670555 + HAL1b LINE L1 514 674 -674 586 291 73 31 chr17 50767952 50768316 -34670164 + L1ME3A LINE L1 5501 5879 -291 1459 169 4 0 chr17 50768542 50768785 -34669695 - AluJo SINE Alu -22 290 47 2392 117 122 19 chr17 50769099 50769509 -34668971 + LTR47A LTR ERVL 1 452 0 798 169 0 15 chr17 50769580 50769710 -34668770 + FLAM_A SINE Alu 6 133 -9 2837 161 18 26 chr17 50769812 50770316 -34668164 + LTR53 LTR ERVL 5 504 -15 323 368 65 32 chr17 50770323 50770600 -34667880 + L1MDa LINE L1 2338 2623 -3917 366 294 25 66 chr17 50770604 50771168 -34667312 - L1MEd LINE L1 -4905 1214 674 2008 123 16 3 chr17 50771740 50772048 -34666432 - AluSx SINE Alu 0 312 1 676 108 0 20 chr17 50772627 50772729 -34665751 + LTR54B LTR ERV1 1 100 -398 1822 168 117 76 chr17 50772833 50773299 -34665181 - LTR54 LTR ERV1 -1 509 21 1951 145 0 3 chr17 50773299 50773595 -34664885 - AluJo SINE Alu -17 295 1 1822 168 117 76 chr17 50773595 50773617 -34664863 - LTR54 LTR ERV1 -489 21 1 333 338 68 39 chr17 50773622 50773829 -34664651 + L1MDa LINE L1 3885 4097 -2443 432 313 22 85 chr17 50774027 50774063 -34664417 + L1MDa LINE L1 4100 4137 -2403 1761 156 23 10 chr17 50774063 50774365 -34664115 + AluJo SINE Alu 1 306 -6 2115 104 0 0 chr17 50774365 50774677 -34663803 + AluSc SINE Alu 1 314 0 432 313 22 85 chr17 50774677 50774862 -34663618 + L1MDa LINE L1 4135 4309 -2231 317 276 19 19 chr17 50775128 50775233 -34663247 + L1MDa LINE L1 4299 4403 -2137 753 136 25 8 chr17 50775447 50775565 -34662915 - FLAM_A SINE Alu -5 137 18 21 0 0 0 chr17 50775589 50775610 -34662870 + AT_rich Low_complexity Low_complexity 1 21 0 2139 107 20 0 chr17 50775618 50775917 -34662563 + AluSg SINE Alu 1 305 -5 2288 63 6 31 chr17 50775917 50776234 -34662246 + AluY SINE Alu 1 310 -1 413 241 58 0 chr17 50776249 50776386 -34662094 + L1ME4a LINE L1 5976 6120 -1 739 214 16 57 chr17 50777269 50777461 -34661019 + MER5A DNA MER1_type 4 187 -2 44 20 0 0 chr17 50777918 50777969 -34660511 + GC_rich Low_complexity Low_complexity 1 51 0 260 214 21 50 chr17 50778197 50778337 -34660143 + (CGGG)n Simple_repeat Simple_repeat 3 138 0 226 330 21 11 chr17 50779468 50779562 -34658918 + L3 LINE CR1 1356 1450 -127 460 286 16 50 chr17 50779822 50780004 -34658476 + MIR SINE MIR 87 262 0 216 0 0 0 chr17 50780031 50780055 -34658425 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 383 242 66 0 chr17 50780056 50780147 -34658333 - L2 LINE L2 -13 3300 3204 229 294 67 67 chr17 50780390 50780509 -34657971 - L2 LINE L2 -537 2777 2659 853 147 16 0 chr17 50781400 50781529 -34656951 + FLAM_C SINE Alu 3 133 0 2037 127 7 0 chr17 50781832 50782123 -34656357 + AluSx SINE Alu 1 293 -19 2270 246 119 31 chr17 50782124 50782902 -34655578 - L2 LINE L2 -19 3294 2362 2134 110 3 0 chr17 50782902 50783194 -34655286 + AluSg SINE Alu 1 293 -17 2270 246 119 31 chr17 50783194 50783665 -34654815 - L2 LINE L2 -951 2362 1934 181 247 278 10 chr17 50783760 50783857 -34654623 - MIR SINE MIR -110 152 30 197 347 14 0 chr17 50783897 50783969 -34654511 - L2 LINE L2 -6 3266 3194 400 229 119 0 chr17 50784518 50784627 -34653853 + LTR16B LTR ERVL 336 457 -7 2065 73 52 21 chr17 50789139 50789428 -34649052 - AluSc SINE Alu -11 298 1 636 249 37 32 chr17 50789560 50789749 -34648731 - MIR3 SINE MIR 0 208 19 244 342 86 20 chr17 50790255 50790407 -34648073 + MIR SINE MIR 2 163 -99 234 91 0 0 chr17 50792107 50792140 -34646340 + (T)n Simple_repeat Simple_repeat 1 33 0 253 315 23 39 chr17 50792849 50792872 -34645608 - MIR3 SINE MIR -32 176 154 1443 158 87 8 chr17 50792872 50793137 -34645343 + AluJo SINE Alu 3 288 -24 253 315 23 39 chr17 50793137 50793243 -34645237 - MIR3 SINE MIR -54 154 49 474 305 64 11 chr17 50793780 50793967 -34644513 - MIR SINE MIR -58 204 8 1271 204 91 0 chr17 50794333 50794476 -34644004 - AluJo SINE Alu -14 288 159 518 0 0 16 chr17 50794476 50794539 -34643941 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 1271 204 91 0 chr17 50794539 50794659 -34643821 - AluJo SINE Alu -143 159 1 267 242 63 32 chr17 50794826 50794921 -34643559 - MER5B DNA MER1_type -77 101 4 331 233 87 19 chr17 50800368 50800471 -34638009 - MIR SINE MIR -49 213 104 910 236 83 0 chr17 50800584 50800813 -34637667 + MIR SINE MIR 15 262 0 293 321 0 19 chr17 50801426 50801532 -34636948 + MIR SINE MIR 157 260 -2 2035 93 60 4 chr17 50802557 50802826 -34635654 - AluSq SINE Alu -9 304 21 714 340 62 11 chr17 50803420 50803791 -34634689 + L2 LINE L2 2357 2746 -568 1965 142 3 26 chr17 50803811 50804113 -34634367 - AluJb SINE Alu -17 295 1 469 290 195 15 chr17 50804118 50804380 -34634100 + L2 LINE L2 3005 3313 0 582 289 18 36 chr17 50805093 50805259 -34633221 - MIR SINE MIR -29 233 71 2708 140 70 6 chr17 50805280 50805795 -34632685 + L1MB7 LINE L1 5615 6162 -22 2186 139 0 3 chr17 50805797 50806107 -34632373 - AluJb SINE Alu -3 309 1 2103 113 31 3 chr17 50806138 50806430 -34632050 + AluSx SINE Alu 1 300 -12 978 279 56 44 chr17 50807846 50807996 -34630484 - LTR33 LTR ERVL -8 513 366 1029 182 69 5 chr17 50807996 50808199 -34630281 - MER20 DNA MER1_type -3 216 1 978 279 56 44 chr17 50808199 50808461 -34630019 - LTR33 LTR ERVL -155 366 96 879 155 0 0 chr17 50808488 50808617 -34629863 - FLAM_C SINE Alu -13 130 2 337 253 72 0 chr17 50808839 50808922 -34629558 - MIR SINE MIR -90 172 84 2351 99 0 25 chr17 50809318 50809632 -34628848 - AluSx SINE Alu -6 306 1 2150 114 10 0 chr17 50809643 50809932 -34628548 - AluSc SINE Alu -17 292 1 432 307 76 9 chr17 50811489 50811671 -34626809 - MIR3 SINE MIR -15 193 2 303 302 101 13 chr17 50813886 50814035 -34624445 + MIR3 SINE MIR 35 196 -12 189 0 0 0 chr17 50814713 50814734 -34623746 + (CAG)n Simple_repeat Simple_repeat 2 22 0 375 239 22 67 chr17 50815195 50815375 -34623105 + L1ME4a LINE L1 5949 6120 -1 1247 157 15 10 chr17 50815820 50816017 -34622463 - AluJo SINE Alu -103 209 12 2361 96 3 0 chr17 50816053 50816354 -34622126 + AluSp SINE Alu 2 303 -10 1754 175 17 0 chr17 50817347 50817644 -34620836 + AluJo SINE Alu 2 303 -9 810 40 0 0 chr17 50817715 50817815 -34620665 - HY3 scRNA scRNA -1 100 1 473 309 112 0 chr17 50818394 50818546 -34619934 - L2 LINE L2 -26 3287 3119 1182 86 0 0 chr17 50818555 50818707 -34619773 + AluY SINE Alu 151 302 -9 1153 306 164 15 chr17 50818833 50819487 -34618993 - L2 LINE L2 -353 2961 2211 1666 200 3 7 chr17 50819825 50820115 -34618365 + AluJo SINE Alu 1 289 -23 198 0 0 0 chr17 50820117 50820139 -34618341 + (CCA)n Simple_repeat Simple_repeat 1 22 0 235 351 63 67 chr17 50820342 50820581 -34617899 + L2 LINE L2 3028 3265 -7 229 348 89 9 chr17 50820582 50820694 -34617786 - MIR SINE MIR -55 153 33 461 296 95 5 chr17 50820949 50821138 -34617342 + MIR SINE MIR 57 262 0 2421 93 3 6 chr17 50821383 50821696 -34616784 + AluSx SINE Alu 1 312 0 1813 126 0 0 chr17 50821826 50822073 -34616407 + AluSx SINE Alu 49 295 -17 189 107 0 0 chr17 50822569 50822597 -34615883 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 2182 117 10 7 chr17 50823485 50823794 -34614686 + AluSq SINE Alu 1 310 -3 978 123 158 0 chr17 50824505 50824676 -34613804 - MER30 DNA MER1_type -31 199 2 241 302 79 0 chr17 50825059 50825122 -34613358 + L2 LINE L2 3244 3311 -2 776 173 8 15 chr17 50825424 50825557 -34612923 - FLAM_C SINE Alu 0 133 2 668 152 0 110 chr17 50826798 50826943 -34611537 + FLAM_A SINE Alu 5 133 0 207 69 0 0 chr17 50826943 50826972 -34611508 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 2083 79 57 4 chr17 50827202 50827482 -34610998 + AluSp SINE Alu 2 296 -17 557 281 70 0 chr17 50827801 50827972 -34610508 - MIR SINE MIR -46 216 34 235 208 20 109 chr17 50828623 50828724 -34609756 - MIR3 SINE MIR -24 184 93 186 208 38 0 chr17 50829265 50829318 -34609162 + MIR3 SINE MIR 1 55 -153 368 262 151 89 chr17 50829628 50829875 -34608605 + L2 LINE L2 2843 3126 -146 384 240 134 69 chr17 50829875 50830121 -34608359 + MIR SINE MIR 1 262 0 368 262 151 89 chr17 50830121 50830278 -34608202 + L2 LINE L2 3126 3272 0 225 108 0 0 chr17 50830280 50830317 -34608163 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 236 222 63 0 chr17 50830322 50830385 -34608095 + MIR SINE MIR 104 170 -92 826 177 8 0 chr17 50830385 50830515 -34607965 + FLAM_C SINE Alu 1 131 -2 4987 75 101 3 chr17 50830590 50831292 -34607188 - LTR17 LTR ERV1 -9 771 1 2279 66 0 0 chr17 50831295 50831583 -34606897 - HERV17 LTR ERV1 -4 8622 8335 267 77 0 0 chr17 50831573 50831612 -34606868 - HERV17 LTR ERV1 -1078 7548 7510 * 4792 42 23 0 chr17 50831605 50831994 -34606486 - HERV17 LTR ERV1 -2607 6019 5610 180 0 0 0 chr17 50831994 50832014 -34606466 + (TTTCC)n Simple_repeat Simple_repeat 2 21 0 4792 42 23 0 chr17 50832014 50832225 -34606255 - HERV17 LTR ERV1 -3016 5610 5405 * 10328 44 7 23 chr17 50832204 50832679 -34605801 - HERV17 LTR ERV1 -4872 3754 3273 2663 56 0 0 chr17 50832679 50832984 -34605496 - AluY SINE Alu -6 305 1 10328 44 7 23 chr17 50832984 50833777 -34604703 - HERV17 LTR ERV1 -5353 3273 2507 2390 70 0 23 chr17 50833777 50834077 -34604403 - AluY SINE Alu -18 293 1 10328 44 7 23 chr17 50834077 50834154 -34604326 - HERV17 LTR ERV1 -6119 2507 2430 8758 58 48 12 chr17 50834137 50835033 -34603447 - HERV17 LTR ERV1 -6610 2016 1066 * 2340 70 7 33 chr17 50835033 50835335 -34603145 + AluY SINE Alu 1 294 -17 8758 58 48 12 chr17 50835335 50835637 -34602843 - HERV17 LTR ERV1 -7560 1066 776 5369 62 8 17 chr17 50835822 50836535 -34601945 - HERV17 LTR ERV1 -7917 709 3 5483 90 67 3 chr17 50836539 50837269 -34601211 - LTR17 LTR ERV1 -2 778 2 310 330 6 21 chr17 50837405 50837561 -34600919 - MIR3 SINE MIR -47 161 66 362 243 81 52 chr17 50837770 50837906 -34600574 - MIR SINE MIR -52 210 71 236 367 0 0 chr17 50837967 50838046 -34600434 - L2 LINE L2 -213 3059 2981 211 258 56 34 chr17 50838370 50838459 -34600021 + MIR SINE MIR 61 151 -111 689 189 0 38 chr17 50838459 50838591 -34599889 + FLAM_A SINE Alu 1 127 -6 1998 127 3 48 chr17 50838752 50839066 -34599414 + AluSx SINE Alu 1 300 -12 2115 121 17 0 chr17 50839150 50839439 -34599041 - AluSx SINE Alu -18 294 1 1657 166 23 20 chr17 50839605 50839906 -34598574 - AluJb SINE Alu -10 302 1 2499 80 0 3 chr17 50839934 50840235 -34598245 + AluSc SINE Alu 1 300 -9 2259 94 20 0 chr17 50840247 50840545 -34597935 + AluSg1 SINE Alu 1 304 -5 26 30 0 0 chr17 50840572 50840605 -34597875 + AT_rich Low_complexity Low_complexity 1 33 0 1642 168 39 32 chr17 50840664 50840974 -34597506 + AluJb SINE Alu 1 312 0 2067 122 0 36 chr17 50840974 50841278 -34597202 + AluSx SINE Alu 1 293 -19 263 248 10 105 chr17 50841284 50841483 -34596997 + L1MC/D LINE L1 5746 5932 -189 933 196 71 81 chr17 50841488 50841549 -34596931 - L1MC4 LINE L1 -1 8041 7981 863 154 0 29 chr17 50841549 50841685 -34596795 + FLAM_C SINE Alu 2 133 0 933 196 71 81 chr17 50841685 50841705 -34596775 - L1MC4 LINE L1 -61 7981 7962 2198 111 10 0 chr17 50841705 50842003 -34596477 - AluSp SINE Alu -12 301 1 933 196 71 81 chr17 50842003 50842078 -34596402 - L1MC4 LINE L1 -80 7962 7888 333 47 0 0 chr17 50842078 50842121 -34596359 + (CA)n Simple_repeat Simple_repeat 2 44 0 933 196 71 81 chr17 50842121 50842319 -34596161 - L1MC4 LINE L1 -154 7888 7593 690 197 8 0 chr17 50842337 50842459 -34596021 + FLAM_A SINE Alu 12 134 -8 220 138 15 46 chr17 50842460 50842525 -34595955 + (TATAA)n Simple_repeat Simple_repeat 1 63 0 193 280 227 0 chr17 50842718 50842793 -34595687 + MIR SINE MIR 48 139 -123 2058 151 7 0 chr17 50842815 50843120 -34595360 - AluSx SINE Alu -5 307 1 317 134 5 51 chr17 50843140 50843209 -34595271 - AluJ/FRAM SINE Alu -16 286 233 852 162 0 21 chr17 50843209 50843351 -34595129 - FLAM_C SINE Alu -4 139 1 588 177 10 0 chr17 50843351 50843447 -34595033 - FRAM SINE Alu -81 95 1 344 325 31 36 chr17 50843510 50843704 -34594776 + L2 LINE L2 2897 3089 -183 379 270 102 7 chr17 50843908 50844045 -34594435 + MLT1D LTR MaLR 216 365 -102 1253 166 0 19 chr17 50844045 50844250 -34594230 - AluSg SINE Alu -4 308 108 1952 178 68 34 chr17 50844256 50844700 -34593780 - LTR2B LTR ERV1 0 490 32 41948 70 20 23 chr17 50844719 50849317 -34589163 - Harlequin LTR ERV1 0 6896 2221 189 191 71 0 chr17 50849317 50849359 -34589121 - MER5C DNA MER1_type -25 299 255 41948 70 20 23 chr17 50849359 50851574 -34586906 - Harlequin LTR ERV1 -4675 2221 1 1937 176 70 34 chr17 50851574 50852017 -34586463 - LTR2B LTR ERV1 0 490 32 573 93 186 0 chr17 50852036 50852122 -34586358 - AluSg SINE Alu -207 103 2 711 194 8 0 chr17 50852122 50852256 -34586224 + MLT1D LTR MaLR 371 505 0 296 336 185 25 chr17 50852256 50852494 -34585986 + L2 LINE L2 2997 3272 0 1864 149 9 35 chr17 50852786 50853102 -34585378 + AluJo SINE Alu 1 308 -4 2510 78 0 0 chr17 50853761 50854067 -34584413 - AluY SINE Alu -5 306 1 4017 147 17 18 chr17 50854141 50854850 -34583630 - L1MB3 LINE L1 -1 6182 5475 696 122 0 0 chr17 50854856 50854954 -34583526 - FRAM SINE Alu -14 162 65 207 100 0 0 chr17 50854954 50854984 -34583496 + (CATA)n Simple_repeat Simple_repeat 2 31 0 397 254 74 8 chr17 50855882 50856004 -34582476 - MIR SINE MIR -69 193 64 236 322 99 53 chr17 50856024 50856176 -34582304 + MIR SINE MIR 103 261 -1 214 246 126 72 chr17 50856301 50856468 -34582012 - MIR3 SINE MIR -23 185 10 192 40 0 0 chr17 50857675 50857700 -34580780 + (CCCCG)n Simple_repeat Simple_repeat 3 27 0 26 50 0 0 chr17 50857744 50857784 -34580696 + GC_rich Low_complexity Low_complexity 1 40 0 233 150 50 0 chr17 50859247 50859287 -34579193 + MER57A LTR ERV1 295 336 -67 859 235 0 0 chr17 50859611 50859773 -34578707 + FRAM SINE Alu 1 162 -4 2020 134 24 0 chr17 50859773 50860071 -34578409 + AluSx SINE Alu 1 305 -7 2257 123 10 0 chr17 50860071 50860380 -34578100 + AluSx SINE Alu 1 312 0 200 263 132 61 chr17 50860398 50860512 -34577968 - L2 LINE L2 -10 3262 3141 361 319 8 12 chr17 50860663 50860785 -34577695 + MIR SINE MIR 10 133 -75 2251 117 7 3 chr17 50861078 50861386 -34577094 - AluSq SINE Alu -4 309 1 2287 137 58 10 chr17 50861797 50861954 -34576526 - LTR23 LTR ERV1 0 437 289 2354 102 3 0 chr17 50861954 50862258 -34576222 + AluSg SINE Alu 1 305 -5 2287 137 58 10 chr17 50862258 50862515 -34575965 - LTR23 LTR ERV1 -148 289 3 1292 209 17 0 chr17 50863120 50863359 -34575121 - AluJo SINE Alu -69 243 1 206 291 257 34 chr17 50863386 50863464 -34575016 + MIR SINE MIR 30 89 -173 1972 137 26 13 chr17 50863464 50863771 -34574709 - AluJo SINE Alu -1 311 1 206 291 257 34 chr17 50863771 50863867 -34574613 + MIR SINE MIR 89 243 -19 419 293 83 19 chr17 50864294 50864451 -34574029 + MIR3 SINE MIR 34 200 -8 2200 88 7 3 chr17 50864668 50864952 -34573528 - AluSg SINE Alu -4 306 22 348 176 0 54 chr17 50864953 50865027 -34573453 - FRAM/FAM SINE Alu -98 68 1 1566 172 0 22 chr17 50865219 50865487 -34572993 - AluJb SINE Alu -44 268 7 1813 160 3 17 chr17 50865601 50865911 -34572569 + AluJo SINE Alu 1 306 0 2207 103 7 0 chr17 50865973 50866264 -34572216 + AluSq SINE Alu 1 293 -20 2415 95 3 0 chr17 50866432 50866738 -34571742 - AluSp SINE Alu -6 307 1 337 158 113 212 chr17 50866852 50866967 -34571513 - L1M4 LINE L1 -865 5281 5156 1722 179 6 28 chr17 50866967 50867285 -34571195 - AluJb SINE Alu -1 311 1 337 158 113 212 chr17 50867285 50867360 -34571120 - L1M4 LINE L1 -990 5156 5075 854 152 16 0 chr17 50867360 50867485 -34570995 - FLAM_A SINE Alu -6 127 1 337 158 113 212 chr17 50867485 50867666 -34570814 - L1M4 LINE L1 -1071 5075 4946 2636 55 0 0 chr17 50867666 50867997 -34570483 - AluY SINE Alu 0 331 1 2190 130 0 3 chr17 50867999 50868300 -34570180 - AluSp SINE Alu -11 302 3 21 0 0 0 chr17 50868500 50868521 -34569959 + AT_rich Low_complexity Low_complexity 1 21 0 355 255 157 0 chr17 50868621 50868723 -34569757 - MER91A DNA MER1_type -1 195 78 1758 160 50 0 chr17 50868936 50869055 -34569425 + AluJo SINE Alu 1 113 -199 189 0 0 0 chr17 50869055 50869076 -34569404 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1758 160 50 0 chr17 50869076 50869237 -34569243 + AluJo SINE Alu 113 295 -17 951 175 48 0 chr17 50869634 50869800 -34568680 + MER2 DNA MER2_type 1 174 -171 306 320 118 13 chr17 50869908 50870061 -34568419 - L1ME LINE L1 -524 5646 5478 2123 134 0 28 chr17 50870114 50870435 -34568045 - AluSx SINE Alu 0 312 1 378 180 0 0 chr17 50870442 50870503 -34567977 + MER2 DNA MER2_type 284 344 -1 1659 147 20 47 chr17 50870643 50870942 -34567538 - AluJo SINE Alu -20 292 2 573 261 88 48 chr17 50871107 50871263 -34567217 - L1MC/D LINE L1 -610 5544 5396 704 189 33 0 chr17 50871263 50871385 -34567095 + FLAM_A SINE Alu 1 126 -7 573 261 88 48 chr17 50871385 50871663 -34566817 - L1MC/D LINE L1 -758 5396 5180 1727 129 11 19 chr17 50872779 50873043 -34565437 - AluJb SINE Alu -50 262 1 472 289 53 7 chr17 50873099 50873251 -34565229 + MIR SINE MIR 28 186 -76 193 349 38 38 chr17 50873623 50873729 -34564751 + MIR SINE MIR 47 152 -56 259 290 80 91 chr17 50873740 50873916 -34564564 + MER5B DNA MER1_type 5 178 0 189 0 0 0 chr17 50874099 50874120 -34564360 + (CTGGGG)n Simple_repeat Simple_repeat 1 21 0 1573 167 46 32 chr17 50874440 50874722 -34563758 - AluSx SINE Alu -26 286 1 1019 174 0 5 chr17 50874752 50874936 -34563544 - MER34 LTR ERV1 0 542 360 479 98 0 0 chr17 50874937 50874998 -34563482 + Alu SINE Alu 1 61 -251 1643 174 13 48 chr17 50875246 50875556 -34562924 + AluJb SINE Alu 1 299 -13 1581 237 89 6 chr17 50876038 50876052 -34562428 - L1ME3A LINE L1 -6 6164 6153 1610 108 0 0 chr17 50876052 50876255 -34562225 - AluSx SINE Alu -73 239 37 1581 237 89 6 chr17 50876255 50876721 -34561759 - L1ME3A LINE L1 -17 6153 5644 2269 89 0 26 chr17 50876945 50877086 -34561394 + AluSx SINE Alu 3 146 -166 2378 105 0 3 chr17 50877086 50877392 -34561088 + AluSq SINE Alu 1 305 -8 2269 89 0 26 chr17 50877392 50877552 -34560928 + AluSx SINE Alu 146 296 -16 824 161 8 0 chr17 50878216 50878340 -34560140 - FLAM_C SINE Alu -8 125 1 1437 162 75 0 chr17 50878813 50879054 -34559426 - AluJo SINE Alu -15 297 39 672 121 0 0 chr17 50879399 50879490 -34558990 - AluJ/FLAM SINE Alu -220 92 2 1742 185 3 3 chr17 50879502 50879794 -34558686 - AluJo SINE Alu -20 292 1 368 256 180 29 chr17 50879804 50879925 -34558555 - L1ME LINE L1 -302 5819 5718 2449 87 0 10 chr17 50879925 50880236 -34558244 - AluSc SINE Alu -1 308 1 198 0 0 0 chr17 50880241 50880263 -34558217 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 368 256 180 29 chr17 50880263 50880307 -34558173 - L1ME LINE L1 -406 5715 5622 363 295 14 7 chr17 50880402 50880541 -34557939 - MER69 DNA AcHobo -7 2519 2380 21 36 0 0 chr17 50881190 50881218 -34557262 + AT_rich Low_complexity Low_complexity 1 28 0 2138 136 3 7 chr17 50881299 50881601 -34556879 + AluSx SINE Alu 1 301 -11 288 0 0 0 chr17 50881665 50881697 -34556783 + (CA)n Simple_repeat Simple_repeat 2 33 0 1091 136 20 25 chr17 50881928 50882126 -34556354 + L1MB3 LINE L1 5982 6178 -5 502 68 29 87 chr17 50882134 50882151 -34556329 + L1MB8 LINE L1 5813 5829 -349 2334 70 0 35 chr17 50882151 50882464 -34556016 + AluY SINE Alu 1 302 -9 502 68 29 87 chr17 50882464 50882549 -34555931 + L1MB8 LINE L1 5829 5909 -269 2249 124 0 0 chr17 50882549 50882855 -34555625 + AluSx SINE Alu 1 306 -6 2407 149 18 29 chr17 50882912 50883362 -34555118 + MER65A LTR ERV1 1 445 0 1960 157 48 15 chr17 50883497 50883834 -34554646 + MER7A DNA MER2_type 1 346 0 1996 133 0 7 chr17 50884298 50884608 -34553872 - AluJb SINE Alu 0 308 1 375 95 89 15 chr17 50884619 50884700 -34553780 + L1MB5 LINE L1 5888 5979 -195 2226 105 0 3 chr17 50884831 50885116 -34553364 + AluSx SINE Alu 15 298 -14 2049 141 24 43 chr17 50885399 50885531 -34552949 - L1M4 LINE L1 -368 5806 5673 1735 176 3 23 chr17 50885531 50885837 -34552643 - AluJo SINE Alu -12 300 1 2049 141 24 43 chr17 50885837 50886036 -34552444 - L1M4 LINE L1 -501 5673 5447 2376 121 0 0 chr17 50886036 50886349 -34552131 - AluSq SINE Alu 0 313 1 2049 141 24 43 chr17 50886349 50886490 -34551990 - L1M4 LINE L1 -727 5447 5305 312 211 92 13 chr17 50886506 50886582 -34551898 - L2 LINE L2 0 3313 3232 862 201 39 0 chr17 50886940 50887094 -34551386 + FRAM SINE Alu 4 163 -3 1232 101 6 0 chr17 50887112 50887280 -34551200 + L1PA10 LINE L1 5988 6156 -12 186 43 0 0 chr17 50887284 50887307 -34551173 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 246 328 109 25 chr17 50887678 50887797 -34550683 + MIR SINE MIR 36 164 -98 2183 104 7 33 chr17 50887800 50888107 -34550373 - AluSx SINE Alu -13 299 1 523 183 0 10 chr17 50888182 50888286 -34550194 + L1MD1 LINE L1 6054 6156 -86 230 298 0 0 chr17 50888406 50888463 -34550017 - AluSp SINE Alu -110 193 137 347 253 12 12 chr17 50888481 50888564 -34549916 - MIR SINE MIR -152 110 28 24 32 0 0 chr17 50889194 50889225 -34549255 + GC_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr17 50889310 50889340 -34549140 + GC_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr17 50890338 50890360 -34548120 + AT_rich Low_complexity Low_complexity 1 22 0 699 178 0 30 chr17 50890360 50890378 -34548102 - FLAM_C SINE Alu -171 131 114 354 23 0 0 chr17 50890378 50890421 -34548059 + (TG)n Simple_repeat Simple_repeat 2 44 0 699 178 0 30 chr17 50890421 50890537 -34547943 - FLAM_C SINE Alu -188 114 1 819 200 103 0 chr17 50891086 50891241 -34547239 + FAM SINE Alu 1 171 -4 332 258 30 13 chr17 50891270 50891379 -34547101 + L1MC4 LINE L1 1996 6983 -1339 1824 135 39 21 chr17 50891381 50891662 -34546818 - AluJo SINE Alu -26 286 1 2605 43 0 10 chr17 50892890 50893195 -34545285 - AluY SINE Alu -9 302 1 1507 116 5 0 chr17 50893520 50893727 -34544753 + AluY SINE Alu 101 308 -3 1724 184 10 7 chr17 50893735 50894034 -34544446 + AluJo SINE Alu 1 300 -12 738 120 0 0 chr17 50894039 50894147 -34544333 - MER34 LTR ERV1 -430 112 5 581 298 19 19 chr17 50894849 50895007 -34543473 + MIR SINE MIR 48 205 -57 4294 146 61 29 chr17 50895010 50895226 -34543254 + L1MB7 LINE L1 5114 5322 -862 2215 133 0 0 chr17 50895226 50895526 -34542954 + AluSx SINE Alu 4 303 -9 4294 146 61 29 chr17 50895526 50896312 -34542168 + L1MB7 LINE L1 5322 6153 -31 189 254 113 28 chr17 50896345 50896416 -34542064 + MIR SINE MIR 186 262 0 2385 86 0 7 chr17 50896505 50896806 -34541674 + AluSc SINE Alu 1 299 -10 182 37 37 0 chr17 50896897 50896924 -34541556 + (TA)n Simple_repeat Simple_repeat 1 28 0 224 319 29 0 chr17 50897114 50897183 -34541297 + MIR SINE MIR 29 99 -163 441 126 46 0 chr17 50897188 50897275 -34541205 + MER53 DNA DNA 2 92 -97 391 119 69 10 chr17 50897331 50897432 -34541048 + MER53 DNA DNA 55 161 -28 431 261 124 20 chr17 50897460 50897613 -34540867 - MIR SINE MIR -73 189 21 2255 93 7 13 chr17 50897649 50897950 -34540530 - AluSg SINE Alu -11 299 1 2300 146 137 5 chr17 50898083 50898529 -34539951 - MLT1D LTR MaLR 0 505 1 196 344 50 44 chr17 50898597 50898777 -34539703 - MIR SINE MIR -54 208 28 231 277 117 11 chr17 50899263 50899357 -34539123 - L2 LINE L2 -30 3283 3180 1852 148 0 45 chr17 50899467 50899778 -34538702 - AluJo SINE Alu -10 302 6 213 313 97 51 chr17 50900523 50900565 -34537915 + L2 LINE L2 2875 2914 -358 2109 146 0 13 chr17 50900565 50900873 -34537607 - AluJb SINE Alu -8 304 1 213 313 97 51 chr17 50900873 50901006 -34537474 + L2 LINE L2 2914 3058 -214 1489 178 101 26 chr17 50901203 50901590 -34536890 + L1MB5 LINE L1 5759 6174 0 345 275 65 43 chr17 50901661 50901799 -34536681 - MIR3 SINE MIR -48 160 20 664 183 100 8 chr17 50902362 50902482 -34535998 - AluJo SINE Alu -51 261 131 1081 167 10 25 chr17 50902498 50902702 -34535778 + AluJb SINE Alu 85 285 -27 967 135 0 0 chr17 50902711 50902844 -34535636 - AluJo SINE Alu -169 133 1 236 154 0 0 chr17 50902848 50902913 -34535567 + L1MD2 LINE L1 6294 6358 -1 775 316 85 3 chr17 50902957 50903299 -34535181 - MLT1J LTR MaLR -100 411 42 1867 109 4 8 chr17 50903548 50903815 -34534665 - AluSx SINE Alu -46 266 1 447 245 125 16 chr17 50903868 50904052 -34534428 - LTR16C LTR ERVL 0 491 288 2382 70 6 13 chr17 50904983 50905298 -34533182 + AluSp SINE Alu 1 313 0 1937 161 0 16 chr17 50905310 50905627 -34532853 + AluJb SINE Alu 1 312 0 484 293 38 19 chr17 50906208 50906365 -34532115 + L2 LINE L2 3113 3272 0 423 253 17 84 chr17 50906399 50906577 -34531903 + MER5A DNA MER1_type 2 167 -22 * 432 281 30 24 chr17 50906443 50906607 -34531873 - MER5A DNA MER1_type -24 165 1 419 329 67 96 chr17 50906927 50907270 -34531210 + L2 LINE L2 2940 3272 0 380 256 124 0 chr17 50907466 50907587 -34530893 + L2 LINE L2 3134 3269 -3 1732 175 0 23 chr17 50907772 50908080 -34530400 - AluJb SINE Alu -11 301 1 204 254 113 14 chr17 50909584 50909655 -34528825 + MER5A DNA MER1_type 35 112 -77 267 31 0 0 chr17 50910460 50910492 -34527988 + (TG)n Simple_repeat Simple_repeat 2 33 0 271 237 118 0 chr17 50911390 50911466 -34527014 - MIR SINE MIR -60 148 64 216 330 180 0 chr17 50911475 50911575 -34526905 + L2 LINE L2 3196 3313 0 197 191 0 21 chr17 50911572 50911619 -34526861 - MIR SINE MIR -140 68 23 * 247 289 241 0 chr17 50914080 50914163 -34524317 - MIR SINE MIR -111 151 49 218 293 58 117 chr17 50914562 50914607 -34523873 - MIR SINE MIR -73 189 143 2428 73 0 10 chr17 50914607 50914921 -34523559 - AluY SINE Alu 0 311 1 218 293 58 117 chr17 50914921 50915063 -34523417 - MIR SINE MIR -119 143 13 201 274 0 0 chr17 50920396 50920447 -34518033 - MIR SINE MIR -109 153 103 336 324 171 28 chr17 50921304 50921456 -34517024 - L2 LINE L2 0 3313 3184 2143 104 3 16 chr17 50921456 50921772 -34516708 + AluSx SINE Alu 1 312 0 336 324 171 28 chr17 50921772 50921940 -34516540 - L2 LINE L2 -129 3184 2947 * 376 243 105 40 chr17 50921937 50922089 -34516391 + L2 LINE L2 3146 3307 -6 518 179 71 54 chr17 50922851 50922963 -34515517 - MER81 DNA DNA 0 114 1 2008 153 0 3 chr17 50923495 50923802 -34514678 - AluSx SINE Alu -6 306 1 637 231 0 92 chr17 50923893 50923950 -34514530 - L1MB8 LINE L1 -5 6173 6112 1468 159 19 52 chr17 50923950 50924220 -34514260 - AluJo SINE Alu -23 289 29 637 231 0 92 chr17 50924220 50924413 -34514067 - L1MB8 LINE L1 -66 6112 5946 387 330 3 0 chr17 50924533 50924886 -34513594 + (CCTG)n Simple_repeat Simple_repeat 1 354 0 498 283 94 29 chr17 50924921 50925112 -34513368 - MIR SINE MIR -6 256 79 2430 140 8 114 chr17 50925112 50925354 -34513126 - MER70A LTR ERVL 0 472 206 1675 144 84 0 chr17 50925354 50925638 -34512842 - AluSx SINE Alu -4 308 1 2430 140 8 114 chr17 50925638 50925685 -34512795 - MER70A LTR ERVL -266 206 156 200 35 35 0 chr17 50925685 50925714 -34512766 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 2053 97 0 0 chr17 50925716 50925994 -34512486 - AluY SINE Alu -33 278 1 2430 140 8 114 chr17 50925994 50926145 -34512335 - MER70A LTR ERVL -317 155 90 1929 121 7 0 chr17 50926145 50926426 -34512054 - AluSx SINE Alu -11 301 19 2430 140 8 114 chr17 50926426 50926508 -34511972 - MER70A LTR ERVL -382 90 1 498 283 94 29 chr17 50926508 50926541 -34511939 - MIR SINE MIR -183 79 16 413 177 0 25 chr17 50926745 50926824 -34511656 + FRAM/FAM SINE Alu 8 84 -92 26 64 0 0 chr17 50927211 50927258 -34511222 + GC_rich Low_complexity Low_complexity 1 47 0 203 215 51 76 chr17 50927912 50927991 -34510489 + MIR SINE MIR 114 190 -72 195 100 0 0 chr17 50928015 50928045 -34510435 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 268 200 0 0 chr17 50928633 50928683 -34509797 - L2 LINE L2 0 3313 3264 327 284 79 31 chr17 50928717 50928844 -34509636 + L2 LINE L2 3175 3307 -6 243 291 134 8 chr17 50929096 50929230 -34509250 - L2 LINE L2 -460 2854 2704 286 268 125 9 chr17 50929272 50929384 -34509096 + L1MC4 LINE L1 7416 7540 -502 749 155 8 0 chr17 50929384 50929513 -34508967 - L1MB1 LINE L1 -3 6165 6036 36 53 0 0 chr17 50929514 50929571 -34508909 + AT_rich Low_complexity Low_complexity 1 57 0 1033 223 86 13 chr17 50929571 50929885 -34508595 + L1MC4 LINE L1 7529 7865 -177 355 164 37 2 chr17 50929886 50930019 -34508461 + MER3 DNA MER1_type 41 209 0 * 520 146 11 0 chr17 50930019 50930065 -34508415 - MER3 DNA MER1_type -162 47 1 337 247 112 0 chr17 50930126 50930215 -34508265 + L1MC4 LINE L1 7943 8041 -1 540 288 177 5 chr17 50930215 50930430 -34508050 + MIR SINE MIR 8 259 -3 405 246 134 0 chr17 50931236 50931370 -34507110 + MIR SINE MIR 78 229 -33 652 248 0 0 chr17 50931373 50931498 -34506982 - MER5A DNA MER1_type -4 185 61 294 172 0 0 chr17 50931520 50931543 -34506937 + A-rich Low_complexity Low_complexity 1 23 -35 747 208 0 0 chr17 50931543 50931673 -34506807 + FLAM_A SINE Alu 4 133 0 294 172 0 0 chr17 50931673 50931707 -34506773 + A-rich Low_complexity Low_complexity 22 58 0 259 338 104 52 chr17 50932405 50932559 -34505921 + MIR3 SINE MIR 7 168 -40 236 213 40 13 chr17 50934407 50934482 -34503998 - L1MC4 LINE L1 -1 8041 7965 855 181 0 0 chr17 50934563 50934696 -34503784 + FLAM_C SINE Alu 1 133 0 228 265 41 0 chr17 50934724 50934822 -34503658 - L1MC4 LINE L1 -77 7965 7864 1996 109 13 33 chr17 50934824 50935128 -34503352 + AluSx SINE Alu 1 298 -14 1831 170 17 0 chr17 50935212 50935506 -34502974 - AluJb SINE Alu -11 301 3 265 344 141 0 chr17 50935811 50935939 -34502541 - L2 LINE L2 -2 3270 3125 230 348 22 11 chr17 50936372 50936464 -34502016 + MER5A DNA MER1_type 97 189 0 219 370 65 0 chr17 50936850 50936942 -34501538 - MIR SINE MIR -107 155 58 609 179 0 51 chr17 50937071 50937188 -34501292 - FRAM SINE Alu -36 140 30 543 291 97 4 chr17 50937388 50937625 -34500855 + MLT1I LTR MaLR 151 409 0 469 279 64 86 chr17 50937630 50937934 -34500546 - L1ME4a LINE L1 -93 6028 5719 1404 167 87 47 chr17 50937934 50938234 -34500246 - AluJb SINE Alu 0 312 1 1483 152 0 138 chr17 50938239 50938495 -34499985 - AluJb SINE Alu -8 304 107 1973 138 10 3 chr17 50938495 50938791 -34499689 - AluSg SINE Alu -12 298 1 1483 152 0 138 chr17 50938791 50938882 -34499598 - AluJb SINE Alu -205 107 5 469 279 64 86 chr17 50938882 50939116 -34499364 - L1ME4a LINE L1 -406 5715 5496 2179 109 0 3 chr17 50939162 50939464 -34499016 - AluSg SINE Alu -9 301 1 370 334 102 22 chr17 50939775 50940263 -34498217 - L1ME4a LINE L1 -37 6084 5558 348 240 115 31 chr17 50940328 50940424 -34498056 - HAL1b LINE L1 -58 1290 1187 226 237 61 44 chr17 50940436 50940550 -34497930 - L1ME4a LINE L1 -158 5963 5848 346 221 0 0 chr17 50940748 50940816 -34497664 + L2 LINE L2 3242 3309 -4 278 310 203 6 chr17 50940958 50941116 -34497364 - MER5A DNA MER1_type 0 189 1 375 309 0 18 chr17 50941116 50941226 -34497254 - MIR3 SINE MIR -48 160 53 819 153 0 8 chr17 50941252 50941376 -34497104 - FLAM_C SINE Alu -18 125 3 2054 127 0 0 chr17 50941388 50941695 -34496785 - AluSx SINE Alu 0 307 1 186 133 67 67 chr17 50942341 50942386 -34496094 - MIR SINE MIR -92 170 126 1127 210 54 96 chr17 50945421 50945628 -34492852 + MER33 DNA MER1_type 5 195 -2390 2109 123 0 0 chr17 50945628 50945951 -34492529 + AluSq SINE Alu 1 323 0 1127 210 54 96 chr17 50945951 50946076 -34492404 + MER33 DNA MER1_type 195 324 0 473 239 207 11 chr17 50946087 50946275 -34492205 + MIR SINE MIR 38 262 0 2214 94 7 3 chr17 50947818 50948116 -34490364 + AluSq SINE Alu 1 299 -14 365 200 14 0 chr17 50948228 50948298 -34490182 + MER81 DNA DNA 44 114 0 533 196 98 0 chr17 50948801 50948903 -34489577 - MER81 DNA DNA 0 114 3 243 0 0 0 chr17 50950117 50950144 -34488336 + (TG)n Simple_repeat Simple_repeat 1 27 0 198 0 0 0 chr17 50950143 50950165 -34488315 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 1823 105 7 21 chr17 50950491 50950777 -34487703 + MER1B DNA MER1_type 58 339 0 389 230 30 67 chr17 50950793 50950884 -34487596 - MIR SINE MIR -16 246 160 1445 231 0 22 chr17 50950884 50951196 -34487284 - AluJo SINE Alu -7 305 1 389 230 30 67 chr17 50951196 50951239 -34487241 - MIR SINE MIR -102 160 117 280 79 0 0 chr17 50951807 50951845 -34486635 + (TTTA)n Simple_repeat Simple_repeat 2 116 0 2162 98 0 7 chr17 50951845 50951997 -34486483 - AluSq SINE Alu -28 285 134 2081 104 10 3 chr17 50951997 50952286 -34486194 - AluSg SINE Alu -19 291 1 2162 98 0 7 chr17 50952286 50952420 -34486060 - AluSq SINE Alu -179 134 1 250 247 73 40 chr17 50953881 50953982 -34484498 - MIR SINE MIR -90 118 19 522 278 105 28 chr17 50954771 50955146 -34483334 - L2 LINE L2 -214 3099 2643 1919 144 0 10 chr17 50955618 50955916 -34482564 + AluSx SINE Alu 1 295 -17 802 160 0 0 chr17 50955929 50956054 -34482426 + FLAM_C SINE Alu 10 134 -9 1618 134 8 23 chr17 50956324 50956586 -34481894 + AluJb SINE Alu 50 307 -5 217 245 38 0 chr17 50960593 50960646 -34477834 - L2 LINE L2 -76 3237 3183 331 321 53 0 chr17 50960700 50960831 -34477649 + MIR3 SINE MIR 13 150 -58 410 318 193 25 chr17 50960876 50961197 -34477283 + L2 LINE L2 2897 3271 -1 698 197 88 0 chr17 50961431 50961568 -34476912 - FRAM SINE Alu -33 143 1 300 286 111 24 chr17 50961572 50961698 -34476782 + MIR SINE MIR 111 247 -15 342 292 21 0 chr17 50962605 50962701 -34475779 + MIR SINE MIR 152 249 -13 472 251 129 6 chr17 50962753 50962924 -34475556 + MIR SINE MIR 1 192 -70 206 222 0 37 chr17 50964769 50964823 -34473657 + MIR SINE MIR 190 241 -21 202 229 62 0 chr17 50964794 50964842 -34473638 + L2 LINE L2 3258 3308 -5 * 356 241 184 21 chr17 50964932 50965073 -34473407 + MIR3 SINE MIR 43 206 -2 528 267 14 27 chr17 50965329 50965475 -34473005 + MIR SINE MIR 46 189 -73 25 0 0 0 chr17 50967513 50967538 -34470942 + GC_rich Low_complexity Low_complexity 1 25 0 21 71 0 0 chr17 50967607 50967649 -34470831 + GC_rich Low_complexity Low_complexity 1 42 0 724 275 14 50 chr17 50968048 50968143 -34470337 - MIR SINE MIR -26 236 139 776 173 77 24 chr17 50968143 50968311 -34470169 - MER45A DNA AcHobo 0 178 2 724 275 14 50 chr17 50968311 50968433 -34470047 - MIR SINE MIR -123 139 27 374 220 14 187 chr17 50969017 50969231 -34469249 + MIR SINE MIR 8 184 -78 196 342 108 8 chr17 50969601 50969721 -34468759 + L2 LINE L2 601 732 -2582 451 309 270 17 chr17 50970054 50970291 -34468189 + L2 LINE L2 1798 1974 -1340 2326 89 3 3 chr17 50970291 50970604 -34467876 - AluSp SINE Alu 0 313 1 451 309 270 17 chr17 50970604 50971129 -34467351 + L2 LINE L2 1974 2753 -561 2012 116 18 0 chr17 50971160 50971445 -34467035 + AluSx SINE Alu 1 290 -22 881 125 0 141 chr17 50971449 50971633 -34466847 + AluSg/x SINE Alu 135 292 -18 650 306 58 65 chr17 50971702 50972084 -34466396 + L2 LINE L2 2887 3265 -7 190 250 36 0 chr17 50972140 50972196 -34466284 - L2 LINE L2 -219 3053 2996 322 261 135 18 chr17 50972216 50972327 -34466153 + MIR3 SINE MIR 79 202 -6 237 180 0 0 chr17 50972867 50972917 -34465563 + C-rich Low_complexity Low_complexity 3 52 0 310 227 227 9 chr17 50976700 50976810 -34461670 - MIR SINE MIR -110 152 19 363 269 138 7 chr17 50977167 50977312 -34461168 + MIR SINE MIR 49 212 -50 316 248 25 74 chr17 50977705 50977740 -34460740 - L1M4 LINE L1 -2959 3187 3152 934 121 0 23 chr17 50977740 50977872 -34460608 - FLAM_C SINE Alu -3 130 2 316 248 25 74 chr17 50977872 50977957 -34460523 - L1M4 LINE L1 -2994 3152 3073 1919 146 33 0 chr17 50977959 50978261 -34460219 - AluJb SINE Alu 0 312 1 326 238 38 19 chr17 50978262 50978367 -34460113 + MIR SINE MIR 123 229 -33 299 245 28 126 chr17 50978371 50978514 -34459966 - L2 LINE L2 -65 3248 3120 419 264 69 35 chr17 50978557 50978701 -34459779 + L2 LINE L2 3164 3312 -1 256 295 90 39 chr17 50978680 50978914 -34459566 - L2 LINE L2 -149 3123 2878 * 677 103 162 34 chr17 50978967 50979084 -34459396 - FLAM_C SINE Alu 0 133 2 663 305 76 23 chr17 50979090 50979444 -34459036 - L2 LINE L2 -570 2744 2372 423 129 20 10 chr17 50980238 50980339 -34458141 + (TG)n Simple_repeat Simple_repeat 1 102 0 186 324 59 0 chr17 50981851 50981919 -34456561 - L3b LINE CR1 -200 1383 1312 198 357 71 21 chr17 50982538 50982678 -34455802 - MIR SINE MIR -36 226 80 201 269 0 19 chr17 50983107 50983159 -34455321 + MIR SINE MIR 98 148 -60 243 323 135 50 chr17 50983462 50983744 -34454736 - L2 LINE L2 -2 3311 3006 182 276 35 0 chr17 50984092 50984150 -34454330 + MIR SINE MIR 106 165 -97 195 204 0 0 chr17 50986190 50986244 -34452236 + (CGG)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr17 50986669 50986690 -34451790 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 50986772 50986793 -34451687 + GC_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 50986944 50986972 -34451508 + GC_rich Low_complexity Low_complexity 1 28 0 450 0 0 0 chr17 50989533 50989583 -34448897 + (TG)n Simple_repeat Simple_repeat 2 51 0 223 342 0 0 chr17 50989870 50989949 -34448531 + G-rich Low_complexity Low_complexity 1 79 0 246 192 0 0 chr17 50990526 50990578 -34447902 + (CA)n Simple_repeat Simple_repeat 1 52 0 315 343 48 34 chr17 50992138 50992284 -34446196 - L2 LINE L2 0 3272 3125 243 295 53 32 chr17 50993386 50993481 -34444999 + L2 LINE L2 3209 3305 -8 341 271 39 71 chr17 50993712 50993867 -34444613 + MIR SINE MIR 85 234 -28 250 288 14 0 chr17 50993891 50993964 -34444516 - MIR SINE MIR -56 206 133 260 137 118 0 chr17 50994052 50994103 -34444377 - MIR SINE MIR -63 145 89 422 18 18 0 chr17 50994402 50994457 -34444023 + (TG)n Simple_repeat Simple_repeat 2 57 0 450 0 0 0 chr17 50995990 50996040 -34442440 + (TG)n Simple_repeat Simple_repeat 1 50 0 526 293 55 0 chr17 50996900 50997064 -34441416 + MIR SINE MIR 14 186 -76 991 196 6 0 chr17 50997605 50997778 -34440702 - MER5B DNA MER1_type -3 175 2 274 232 49 146 chr17 50998702 50998866 -34439614 + MIR3 SINE MIR 16 163 -45 497 135 42 21 chr17 50998921 50999017 -34439463 - L1MB8 LINE L1 0 6178 6081 508 200 191 0 chr17 50999290 50999405 -34439075 - MIR SINE MIR -6 256 120 371 311 28 40 chr17 50999496 50999673 -34438807 - MIR SINE MIR -59 203 29 261 221 53 53 chr17 51000417 51000512 -34437968 - MIR SINE MIR -112 150 56 626 331 19 15 chr17 51000682 51000942 -34437538 + MIR SINE MIR 2 262 0 264 59 0 0 chr17 51001338 51001372 -34437108 + (CCA)n Simple_repeat Simple_repeat 2 35 0 275 289 20 25 chr17 51001851 51001986 -34436494 + MIR SINE MIR 32 143 -65 400 387 42 24 chr17 51002032 51002244 -34436236 - MIR SINE MIR 0 262 47 216 278 70 26 chr17 51002575 51002690 -34435790 + MIR3 SINE MIR 51 170 -38 403 260 0 82 chr17 51002942 51003138 -34435342 + (TG)n Simple_repeat Simple_repeat 1 180 0 216 344 21 0 chr17 51003160 51003256 -34435224 + (TG)n Simple_repeat Simple_repeat 2 99 0 191 314 0 0 chr17 51003353 51003404 -34435076 - MIR3 SINE MIR -14 194 144 834 236 129 15 chr17 51004586 51004849 -34433631 + L3 LINE CR1 1133 1425 -152 305 275 27 27 chr17 51006426 51006575 -34431905 + (CAGAGA)n Simple_repeat Simple_repeat 3 151 0 322 288 26 13 chr17 51006600 51006753 -34431727 + (CAGAGA)n Simple_repeat Simple_repeat 3 157 0 1189 198 19 5 chr17 51007329 51007536 -34430944 + MER63A DNA MER1_type 1 210 0 416 174 25 50 chr17 51007628 51007749 -34430731 - L2 LINE L2 -190 3082 2965 269 343 157 13 chr17 51009535 51009847 -34428633 - L2 LINE L2 -924 2390 2034 917 206 0 0 chr17 51010592 51010762 -34427718 - FRAM SINE Alu -8 168 1 237 317 125 38 chr17 51011552 51011896 -34426584 + L2 LINE L2 2600 2973 -341 375 277 62 15 chr17 51012064 51012194 -34426286 - MIR SINE MIR -66 196 61 244 344 73 47 chr17 51012667 51012859 -34425621 + MIR SINE MIR 60 256 -6 302 239 102 23 chr17 51013523 51013611 -34424869 - L1MB8 LINE L1 -1 6177 6083 224 276 26 13 chr17 51015158 51015234 -34423246 - MIR SINE MIR -91 117 41 333 0 0 0 chr17 51015363 51015400 -34423080 + (TG)n Simple_repeat Simple_repeat 2 38 0 385 337 117 10 chr17 51019970 51020175 -34418305 + MIR SINE MIR 36 262 0 233 307 139 0 chr17 51022561 51022662 -34415818 + MIR SINE MIR 33 147 -61 692 244 131 27 chr17 51022695 51022916 -34415564 - MIR SINE MIR 0 262 19 27 0 0 0 chr17 51022918 51022945 -34415535 + AT_rich Low_complexity Low_complexity 1 27 0 5376 121 21 45 chr17 51022945 51023474 -34415006 - L1MA7 LINE L1 0 6291 5751 207 0 0 0 chr17 51023474 51023497 -34414983 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1945 113 0 18 chr17 51023504 51023779 -34414701 - AluSx SINE Alu -42 270 1 5376 121 21 45 chr17 51023779 51024198 -34414282 - L1MA7 LINE L1 -546 5745 5360 1960 114 39 4 chr17 51024198 51024478 -34414002 - AluSx SINE Alu -22 290 1 5376 121 21 45 chr17 51024478 51024565 -34413915 - L1MA7 LINE L1 -931 5360 5272 678 241 23 11 chr17 51024605 51024779 -34413701 - MIR SINE MIR -79 183 8 292 303 0 25 chr17 51025870 51025992 -34412488 + G-rich Low_complexity Low_complexity 2 120 0 191 351 11 21 chr17 51027269 51027363 -34411117 + L2 LINE L2 408 500 -2814 615 286 11 22 chr17 51030716 51030898 -34407582 + MIR SINE MIR 11 190 -72 752 185 34 0 chr17 51030905 51031051 -34407429 - MER5A DNA MER1_type 0 189 39 308 218 4 0 chr17 51031685 51031762 -34406718 - MIR SINE MIR -69 139 59 * 377 290 62 65 chr17 51031748 51031949 -34406531 + MIR SINE MIR 10 204 -42 661 248 57 102 chr17 51032573 51032672 -34405808 + MER102b DNA MER1_type 14 116 -1312 1681 152 45 7 chr17 51032672 51032961 -34405519 + AluJo SINE Alu 1 300 -12 661 248 57 102 chr17 51032961 51033196 -34405284 + MER102b DNA MER1_type 116 333 -8 216 0 0 0 chr17 51033976 51034000 -34404480 + (TA)n Simple_repeat Simple_repeat 2 25 0 189 154 0 0 chr17 51034013 51034052 -34404428 + A-rich Low_complexity Low_complexity 1 39 0 205 294 0 20 chr17 51034353 51034455 -34404025 + (TCTCTG)n Simple_repeat Simple_repeat 4 103 0 2487 74 0 0 chr17 51036424 51036734 -34401746 + AluSg SINE Alu 1 310 0 389 217 54 0 chr17 51037519 51037611 -34400869 - MER5A DNA MER1_type 0 189 93 212 319 101 17 chr17 51038580 51038699 -34399781 + MIR3 SINE MIR 35 163 -45 459 261 134 0 chr17 51041050 51041207 -34397273 - MIR SINE MIR -29 233 56 271 287 167 0 chr17 51041203 51041311 -34397169 - L2 LINE L2 -1 3312 3187 * 286 337 12 0 chr17 51041371 51041457 -34397023 + MIR3 SINE MIR 110 196 -12 959 159 36 31 chr17 51042087 51042282 -34396198 + MIR SINE MIR 7 202 -60 240 35 0 0 chr17 51042296 51042325 -34396155 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1445 178 0 31 chr17 51042325 51042584 -34395896 - AluJb SINE Alu -46 266 16 214 259 37 0 chr17 51042588 51042642 -34395838 + MIR SINE MIR 197 252 -10 311 257 166 9 chr17 51042674 51042821 -34395659 + MIR3 SINE MIR 20 196 -12 253 309 14 29 chr17 51044822 51044961 -34393519 + CT-rich Low_complexity Low_complexity 3 139 0 225 200 20 0 chr17 51044969 51045019 -34393461 + (TG)n Simple_repeat Simple_repeat 2 52 0 1872 136 0 52 chr17 51048542 51048852 -34389628 - AluJb SINE Alu -8 304 11 453 319 0 0 chr17 51050056 51050172 -34388308 - L2 LINE L2 -1 3312 3197 209 301 136 0 chr17 51050179 51050282 -34388198 - MIR SINE MIR -62 146 30 2257 80 23 0 chr17 51050403 51050702 -34387778 - AluSp SINE Alu -7 306 1 348 307 152 64 chr17 51050814 51051143 -34387337 - L2 LINE L2 -2 3270 2913 219 152 0 0 chr17 51052852 51052898 -34385582 + (TA)n Simple_repeat Simple_repeat 1 46 0 312 178 0 0 chr17 51053052 51053125 -34385355 + (TG)n Simple_repeat Simple_repeat 2 74 0 486 247 29 38 chr17 51055469 51055655 -34382825 - MIR SINE MIR -64 198 13 540 276 157 11 chr17 51057475 51057761 -34380719 - L2 LINE L2 -2 3270 2943 201 381 38 9 chr17 51057864 51057969 -34380511 + MIR SINE MIR 79 186 -76 284 333 101 14 chr17 51058539 51058677 -34379803 - MIR3 SINE MIR -4 204 55 268 356 11 0 chr17 51058673 51058760 -34379720 - L2 LINE L2 -76 3196 3109 * 408 285 56 56 chr17 51059524 51059703 -34378777 - MIR SINE MIR -6 256 78 290 220 17 0 chr17 51059890 51059949 -34378531 - MIR SINE MIR -59 149 90 489 239 26 0 chr17 51061062 51061175 -34377305 - MIR3 SINE MIR -39 169 54 948 195 6 0 chr17 51061188 51061352 -34377128 + FRAM SINE Alu 1 165 -1 290 276 92 13 chr17 51062269 51062421 -34376059 - MIR3 SINE MIR 0 208 45 204 325 0 12 chr17 51062383 51062463 -34376017 + MIR SINE MIR 19 97 -111 * 237 295 29 67 chr17 51063089 51063194 -34375286 + MIR SINE MIR 117 217 -45 502 231 39 15 chr17 51063809 51063939 -34374541 + L3 LINE CR1 1373 1505 -72 349 246 0 0 chr17 51064242 51064311 -34374169 + MIR SINE MIR 56 124 -84 2283 112 0 0 chr17 51065211 51065514 -34372966 - AluSx SINE Alu -9 303 1 1924 127 0 14 chr17 51065959 51066251 -34372229 - AluSx SINE Alu -2 310 23 184 250 60 103 chr17 51066816 51066932 -34371548 + L3 LINE CR1 561 671 -906 483 258 13 38 chr17 51067055 51067214 -34371266 - L2 LINE L2 0 3313 3159 1666 109 4 9 chr17 51067214 51067444 -34371036 + AluJb SINE Alu 1 229 -83 608 282 103 34 chr17 51067496 51067758 -34370722 - L2 LINE L2 -777 2537 2258 265 327 18 64 chr17 51068051 51068161 -34370319 - MIR SINE MIR -102 160 56 189 312 92 43 chr17 51068318 51068459 -34370021 + MIR SINE MIR 34 181 -81 256 337 30 0 chr17 51068942 51069043 -34369437 + L2 LINE L2 3153 3256 -16 2404 87 0 0 chr17 51069481 51069790 -34368690 + AluSg SINE Alu 1 309 -1 2154 122 0 0 chr17 51069880 51070183 -34368297 + AluSx SINE Alu 1 303 -9 2454 68 0 0 chr17 51070187 51070496 -34367984 + AluY SINE Alu 1 309 -2 1320 192 0 112 chr17 51070505 51070844 -34367636 + AluSx SINE Alu 2 302 0 1524 163 8 11 chr17 51071057 51071321 -34367159 - AluJo SINE Alu -20 292 30 1168 257 94 60 chr17 51071347 51072152 -34366328 - L2 LINE L2 -1 3312 2005 325 216 26 74 chr17 51072205 51072318 -34366162 - MIR SINE MIR -25 183 71 258 273 82 36 chr17 51072278 51072322 -34366158 + MIR SINE MIR 13 54 -208 * 2292 95 3 0 chr17 51072322 51072627 -34365853 - AluSg SINE Alu -4 306 1 258 273 82 36 chr17 51072627 51072692 -34365788 + MIR SINE MIR 54 127 -135 345 333 148 30 chr17 51072757 51073162 -34365318 - L2 LINE L2 -871 2443 1991 2070 114 3 3 chr17 51073206 51073504 -34364976 + AluSx SINE Alu 1 298 -14 505 220 84 61 chr17 51073517 51073731 -34364749 + HAL1 LINE L1 1 219 -2288 252 221 44 0 chr17 51073918 51073986 -34364494 + HAL1 LINE L1 540 610 -1897 2237 98 10 0 chr17 51074283 51074579 -34363901 + AluSx SINE Alu 1 299 -13 825 241 74 36 chr17 51074605 51075003 -34363477 - MER57A LTR ERV1 0 403 54 676 134 23 11 chr17 51075040 51075220 -34363260 + GA-rich Low_complexity Low_complexity 1 182 0 608 234 30 56 chr17 51075248 51075485 -34362995 - MER57A-int LTR ERV1 -2229 4102 2469 526 227 92 107 chr17 51075472 51075586 -34362894 - MER57A-int LTR ERV1 -2550 2573 2459 * 2092 81 0 4 chr17 51075586 51075857 -34362623 - AluSq SINE Alu -43 270 1 526 227 92 107 chr17 51075857 51076234 -34362246 - MER57A-int LTR ERV1 -2664 2459 2065 2132 128 3 0 chr17 51076234 51076539 -34361941 + AluSx SINE Alu 1 306 -6 526 227 92 107 chr17 51076539 51076742 -34361738 - MER57A-int LTR ERV1 -3058 2065 1860 543 114 0 79 chr17 51076822 51076891 -34361589 - MER34 LTR ERV1 -305 237 179 1829 144 13 10 chr17 51076891 51077190 -34361290 + AluJb SINE Alu 1 300 -12 543 114 0 79 chr17 51077190 51077234 -34361246 - MER34 LTR ERV1 -363 179 133 843 254 87 28 chr17 51077234 51077860 -34360620 - MER57A-int LTR ERV1 -2903 1968 888 326 238 0 0 chr17 51078217 51078280 -34360200 - MER57A-int LTR ERV1 -7238 299 237 2285 100 6 0 chr17 51078514 51078825 -34359655 + AluSq SINE Alu 1 313 0 581 235 135 87 chr17 51078829 51078919 -34359561 - MER57A LTR ERV1 -4 399 315 2246 102 0 7 chr17 51078919 51079223 -34359257 + AluSq SINE Alu 1 302 -11 581 235 135 87 chr17 51079223 51079511 -34358969 - MER57A LTR ERV1 -88 315 3 393 261 193 14 chr17 51079563 51079770 -34358710 + L1ME4a LINE L1 5878 6121 0 576 239 9 0 chr17 51079912 51080025 -34358455 + MER81 DNA DNA 1 114 0 187 336 0 84 chr17 51080047 51080154 -34358326 - MIR SINE MIR -55 207 110 2314 77 0 26 chr17 51080261 51080572 -34357908 + AluY SINE Alu 1 303 -8 2400 68 3 0 chr17 51080577 51080885 -34357595 + AluSc SINE Alu 1 309 0 312 289 10 19 chr17 51080961 51081065 -34357415 + L1ME1 LINE L1 6064 6166 0 2050 90 38 14 chr17 51081511 51081525 -34356955 - AluSx SINE Alu -17 295 283 194 0 0 37 chr17 51081525 51081552 -34356928 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2050 90 38 14 chr17 51081552 51081825 -34356655 - AluSx SINE Alu -29 283 1 337 357 32 6 chr17 51083172 51083329 -34355151 + MIR SINE MIR 70 230 -32 433 308 53 72 chr17 51085023 51085153 -34353327 - MIR SINE MIR -3 259 135 1889 168 0 3 chr17 51085153 51085450 -34353030 + AluJo SINE Alu 1 296 -16 433 308 53 72 chr17 51085450 51085582 -34352898 - MIR SINE MIR -127 135 2 671 274 63 25 chr17 51086746 51086983 -34351497 - MIR SINE MIR -6 256 11 302 331 132 55 chr17 51087100 51087357 -34351123 - L2 LINE L2 0 3272 2996 212 300 57 52 chr17 51087649 51087859 -34350621 - L2 LINE L2 -818 2496 2286 1491 177 0 4 chr17 51087868 51088117 -34350363 + AluJo SINE Alu 64 311 -1 1061 180 12 0 chr17 51089637 51089809 -34348671 + FAM SINE Alu 2 175 0 2402 88 0 0 chr17 51089873 51090181 -34348299 + AluSg SINE Alu 1 308 -2 187 340 202 0 chr17 51090870 51090964 -34347516 - MIR SINE MIR -55 153 41 2257 103 0 19 chr17 51091050 51091362 -34347118 - AluSx SINE Alu -6 306 1 814 292 31 72 chr17 51091451 51091640 -34346840 + L2 LINE L2 2851 3046 -267 2264 79 3 0 chr17 51091640 51091932 -34346548 + AluSp SINE Alu 1 293 -20 814 292 31 72 chr17 51091932 51092225 -34346255 + L2 LINE L2 3046 3313 0 215 406 52 19 chr17 51092233 51092388 -34346092 - L2 LINE L2 -38 3234 3075 1778 169 0 3 chr17 51092388 51092683 -34345797 + AluJo SINE Alu 1 294 -18 200 338 14 21 chr17 51094033 51094178 -34344302 + CT-rich Low_complexity Low_complexity 1 144 0 * 214 245 0 109 chr17 51094097 51094244 -34344236 + C-rich Low_complexity Low_complexity 2 132 0 203 279 88 15 chr17 51095052 51095120 -34343360 - L2 LINE L2 0 3272 3200 1591 188 52 0 chr17 51095243 51095531 -34342949 - AluJo SINE Alu -9 303 1 2011 123 3 3 chr17 51095540 51095832 -34342648 - AluSx SINE Alu -20 292 1 566 260 143 50 chr17 51095893 51096193 -34342287 - L2 LINE L2 -1 3312 2985 2503 124 25 58 chr17 51096388 51096450 -34342030 - L1MB2 LINE L1 -2 6169 6106 1821 144 0 21 chr17 51096450 51096734 -34341746 + AluSx SINE Alu 29 306 -6 2503 124 25 58 chr17 51096734 51096922 -34341558 - L1MB2 LINE L1 -65 6106 5938 2530 155 11 52 chr17 51096922 51097153 -34341327 - MSTC LTR MaLR 0 428 222 2166 110 3 25 chr17 51097153 51097472 -34341008 - AluSx SINE Alu 0 312 1 2530 155 11 52 chr17 51097472 51097686 -34340794 - MSTC LTR MaLR -206 222 1 2503 124 25 58 chr17 51097686 51097879 -34340601 - L1MB2 LINE L1 -233 5938 5740 1532 153 32 58 chr17 51098028 51098336 -34340144 + AluSx SINE Alu 1 300 -12 2208 85 0 0 chr17 51099351 51099812 -34338668 - AluSc SINE Alu 0 464 4 351 262 47 0 chr17 51099930 51100037 -34338443 - L2 LINE L2 -2 3311 3200 2294 90 0 0 chr17 51100249 51100548 -34337932 - AluSg SINE Alu -11 299 1 210 345 0 0 chr17 51100556 51100611 -34337869 - MIR SINE MIR -200 62 8 379 221 10 29 chr17 51102192 51102296 -34336184 + MIR SINE MIR 100 201 -61 2049 103 11 0 chr17 51102359 51102632 -34335848 - AluSx SINE Alu -36 276 1 2148 101 10 0 chr17 51104091 51104388 -34334092 + AluSx SINE Alu 1 300 -12 276 250 0 0 chr17 51104792 51104844 -34333636 - MER5A DNA MER1_type -83 106 55 526 271 108 6 chr17 51104850 51105016 -34333464 + MER5A DNA MER1_type 4 186 -3 283 332 83 51 chr17 51105459 51105833 -34332647 - L2 LINE L2 0 3272 2887 1128 330 124 23 chr17 51105862 51106243 -34332237 + L2 LINE L2 776 1117 -2197 2205 119 0 3 chr17 51106243 51106538 -34331942 + AluSx SINE Alu 1 294 -18 1128 330 124 23 chr17 51106538 51107269 -34331211 + L2 LINE L2 1117 2000 -1314 670 242 79 6 chr17 51107567 51107732 -34330748 + MER45A DNA AcHobo 1 177 -1 953 236 103 54 chr17 51107744 51108309 -34330171 + L2 LINE L2 2647 3294 -19 1674 168 0 27 chr17 51108374 51108671 -34329809 + AluJo SINE Alu 6 294 -18 697 155 0 26 chr17 51108672 51108788 -34329692 + AluJo/FRAM SINE Alu 134 246 -66 24 0 0 0 chr17 51108794 51108818 -34329662 + AT_rich Low_complexity Low_complexity 1 24 0 437 286 138 20 chr17 51110454 51110650 -34327830 - MIR SINE MIR -16 246 28 477 257 22 7 chr17 51110782 51110883 -34327597 + MIR SINE MIR 75 180 -82 1176 161 82 30 chr17 51110883 51111187 -34327293 - MER33 DNA MER1_type -4 320 1 477 257 22 7 chr17 51111187 51111221 -34327259 + MIR SINE MIR 180 212 -50 216 182 0 0 chr17 51111255 51111299 -34327181 + CT-rich Low_complexity Low_complexity 1 44 0 2242 107 7 0 chr17 51111364 51111655 -34326825 + AluSx SINE Alu 1 293 -19 433 137 0 0 chr17 51113393 51113466 -34325014 - AluSx SINE Alu 0 312 240 1527 59 16 5 chr17 51113474 51113660 -34324820 - AluSx SINE Alu -124 188 1 246 221 286 0 chr17 51113968 51114045 -34324435 + MIR SINE MIR 80 178 -84 1871 144 46 0 chr17 51114055 51114176 -34324304 + AluSx SINE Alu 1 115 -197 221 0 0 33 chr17 51114176 51114206 -34324274 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1871 144 46 0 chr17 51114206 51114368 -34324112 + AluSx SINE Alu 115 297 -15 1951 103 66 0 chr17 51114378 51114650 -34323830 + AluSx SINE Alu 8 297 -15 264 30 0 0 chr17 51116065 51116098 -34322382 + (CAG)n Simple_repeat Simple_repeat 2 34 0 358 172 97 0 chr17 51116810 51116903 -34321577 - MIR SINE MIR -73 135 34 22 0 0 0 chr17 51118653 51118675 -34319805 + AT_rich Low_complexity Low_complexity 1 22 0 2307 113 3 0 chr17 51119299 51119600 -34318880 + AluSx SINE Alu 1 302 -10 846 126 0 8 chr17 51120537 51120656 -34317824 + FLAM_C SINE Alu 1 118 -15 560 80 9 142 chr17 51122094 51122207 -34316273 + HY3 scRNA scRNA 1 98 -3 2067 159 124 101 chr17 51123321 51123943 -34314537 + L1MC4 LINE L1 6521 7156 -886 572 187 19 218 chr17 51123947 51124308 -34314172 + L1MC4 LINE L1 7528 7797 -245 2179 113 0 60 chr17 51124308 51124627 -34313853 + AluSx SINE Alu 1 300 -12 572 187 19 218 chr17 51124627 51124682 -34313798 + L1MC4 LINE L1 7797 7861 -181 295 237 86 11 chr17 51124686 51124779 -34313701 + L1MC4 LINE L1 7939 8038 -4 207 0 0 0 chr17 51125310 51125333 -34313147 + (CAT)n Simple_repeat Simple_repeat 3 25 0 21 71 0 0 chr17 51125491 51125533 -34312947 + AT_rich Low_complexity Low_complexity 1 42 0 2455 85 3 0 chr17 51125613 51125919 -34312561 + AluSp SINE Alu 2 308 -5 2181 117 17 0 chr17 51127573 51127863 -34310617 + AluSx SINE Alu 1 295 -17 432 229 83 18 chr17 51128674 51128783 -34309697 - MIR SINE MIR 0 262 147 1793 255 70 35 chr17 51128793 51129659 -34308821 - L2 LINE L2 -115 3198 2317 2452 85 3 3 chr17 51129683 51129989 -34308491 + AluSq SINE Alu 1 306 -7 506 211 50 157 chr17 51130052 51130283 -34308197 + MIR SINE MIR 10 207 -55 2486 58 0 22 chr17 51130283 51130594 -34307886 + AluY SINE Alu 1 304 -7 506 211 50 157 chr17 51130594 51130642 -34307838 + MIR SINE MIR 207 259 -3 893 107 0 8 chr17 51130973 51131095 -34307385 - FLAM_C SINE Alu -8 125 5 2159 124 3 0 chr17 51131111 51131409 -34307071 - AluSg SINE Alu -11 299 1 218 242 121 71 chr17 51131419 51131518 -34306962 + MIR SINE MIR 29 117 -91 2182 80 0 4 chr17 51131576 51131838 -34306642 - AluSc SINE Alu -16 293 33 1947 108 45 54 chr17 51132069 51132383 -34306097 + AluJb SINE Alu 1 311 -1 31 88 0 0 chr17 51133120 51133200 -34305280 + GC_rich Low_complexity Low_complexity 1 80 0 2022 136 3 7 chr17 51134644 51134952 -34303528 - AluSx SINE Alu -5 307 1 204 54 27 27 chr17 51134952 51134989 -34303491 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2512 77 0 13 chr17 51135037 51135349 -34303131 - AluSp SINE Alu -5 308 1 367 316 77 0 chr17 51135642 51135759 -34302721 - L2 LINE L2 -8 3264 3139 879 289 35 0 chr17 51135796 51135997 -34302483 + MIR SINE MIR 1 208 -54 522 226 118 98 chr17 51136279 51136404 -34302076 - MIR SINE MIR -34 228 95 1460 98 209 8 chr17 51136404 51136665 -34301815 + AluSg1 SINE Alu 1 308 0 522 226 118 98 chr17 51136665 51136742 -34301738 - MIR SINE MIR -167 95 21 412 273 36 42 chr17 51136755 51136920 -34301560 - L2 LINE L2 -996 2318 2155 2295 103 3 0 chr17 51136925 51137226 -34301254 + AluSx SINE Alu 2 303 -9 623 195 0 18 chr17 51137240 51137353 -34301127 + FLAM_A SINE Alu 1 111 -31 21 0 0 0 chr17 51137383 51137404 -34301076 + AT_rich Low_complexity Low_complexity 1 21 0 1825 135 61 52 chr17 51137429 51137709 -34300771 + MER47A DNA MER2_type 1 286 -2037 1903 142 46 33 chr17 51137709 51137750 -34300730 - THE1C LTR MaLR 0 375 336 2093 132 0 16 chr17 51137750 51138060 -34300420 + AluSx SINE Alu 1 305 -7 1903 142 46 33 chr17 51138060 51138384 -34300096 - THE1C LTR MaLR -39 336 5 1825 135 61 52 chr17 51138384 51138466 -34300014 + MER47A DNA MER2_type 286 366 0 339 292 127 34 chr17 51138470 51138706 -34299774 - L2 LINE L2 -1193 2121 1864 1363 199 7 24 chr17 51138725 51139022 -34299458 - MLT1A1 LTR MaLR -2 363 72 350 58 0 0 chr17 51139020 51139072 -34299408 - AluJb SINE Alu 0 302 251 * 180 0 0 0 chr17 51139104 51139124 -34299356 + (CAA)n Simple_repeat Simple_repeat 2 21 0 260 200 0 0 chr17 51139310 51139360 -34299120 + AluSg/x SINE Alu 144 193 -109 210 37 0 0 chr17 51139591 51139618 -34298862 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1428 174 32 4 chr17 51139625 51139878 -34298602 - AluJb SINE Alu -52 260 1 1998 129 0 51 chr17 51139940 51140251 -34298229 + AluSx SINE Alu 1 295 -17 1585 193 32 69 chr17 51140359 51140764 -34297716 - MLT1B LTR MaLR 0 390 1 1991 124 32 3 chr17 51140764 51141047 -34297433 - AluSg SINE Alu -16 294 4 1984 145 3 3 chr17 51141439 51141728 -34296752 - AluJo SINE Alu -21 291 3 321 246 99 42 chr17 51141754 51141896 -34296584 + L2 LINE L2 3121 3270 -2 2380 89 0 0 chr17 51142000 51142293 -34296187 - AluY SINE Alu -18 293 1 252 292 169 54 chr17 51142339 51142493 -34295987 + L2 LINE L2 1398 1533 -1781 1834 128 16 46 chr17 51142493 51142797 -34295683 - AluSx SINE Alu -15 297 3 252 292 169 54 chr17 51142797 51142902 -34295578 + L2 LINE L2 1533 1687 -1627 694 187 8 15 chr17 51142938 51143072 -34295408 - FLAM_C SINE Alu 0 133 1 2124 79 52 31 chr17 51143110 51143401 -34295079 + AluSx SINE Alu 11 307 -5 2091 115 0 14 chr17 51143474 51143770 -34294710 + AluJb SINE Alu 1 292 -20 590 165 239 74 chr17 51143794 51143970 -34294510 - MIR SINE MIR -51 211 7 258 209 254 36 chr17 51144023 51144133 -34294347 + L2 LINE L2 3139 3272 0 366 23 0 0 chr17 51144138 51144150 -34294330 + (TG)n Simple_repeat Simple_repeat 1 55 0 366 23 0 0 chr17 51144150 51144193 -34294287 + (TG)n Simple_repeat Simple_repeat 2 44 0 2551 68 3 0 chr17 51144218 51144526 -34293954 - AluSp SINE Alu -4 309 1 236 108 0 0 chr17 51146600 51146637 -34291843 - LTR10D LTR ERV1 0 513 477 251 261 35 131 chr17 51147478 51147639 -34290841 + MER5A DNA MER1_type 10 150 -39 2484 72 0 3 chr17 51147639 51147946 -34290534 - AluSc SINE Alu -3 306 1 251 261 35 131 chr17 51147946 51147983 -34290497 + MER5A DNA MER1_type 150 189 0 1957 110 73 0 chr17 51149112 51149385 -34289095 - AluSx SINE Alu -19 293 1 346 202 154 69 chr17 51149493 51149692 -34288788 - L1MC5 LINE L1 -58 7903 7680 2021 136 13 3 chr17 51149692 51149994 -34288486 + AluSx SINE Alu 1 305 -7 346 202 154 69 chr17 51149994 51150027 -34288453 - L1MC5 LINE L1 -281 7680 7651 315 0 0 0 chr17 51150062 51150097 -34288383 + (TG)n Simple_repeat Simple_repeat 2 36 0 2140 114 13 19 chr17 51150200 51150508 -34287972 - AluSx SINE Alu -6 306 1 2423 80 0 3 chr17 51150578 51150877 -34287603 + AluSx SINE Alu 1 298 -14 3415 138 68 48 chr17 51151053 51151613 -34286867 + Tigger2 DNA MER2_type 2 582 -2136 2133 136 7 0 chr17 51151613 51151922 -34286558 - AluSx SINE Alu -1 311 1 3415 138 68 48 chr17 51151922 51152095 -34286385 + Tigger2 DNA MER2_type 582 750 -1968 743 122 7 75 chr17 51152223 51152258 -34286222 + Tigger2 DNA MER2_type 2509 2545 -173 2334 92 3 0 chr17 51152258 51152552 -34285928 + AluSx SINE Alu 1 295 -17 743 122 7 75 chr17 51152552 51152663 -34285817 + Tigger2 DNA MER2_type 2545 2645 -73 1106 159 168 4 chr17 51152681 51152913 -34285567 - MSTB1 LTR MaLR -18 414 145 2320 61 6 45 chr17 51153274 51153585 -34284895 + AluY SINE Alu 1 299 -12 24 53 0 0 chr17 51153831 51153869 -34284611 + AT_rich Low_complexity Low_complexity 1 38 0 2102 135 0 3 chr17 51154001 51154304 -34284176 - AluSx SINE Alu -10 302 1 4064 166 54 16 chr17 51154416 51155206 -34283274 - MER6 DNA MER2_type 0 865 46 485 58 14 0 chr17 51155335 51155404 -34283076 + (TA)n Simple_repeat Simple_repeat 2 71 0 1546 134 20 80 chr17 51155422 51155722 -34282758 - AluJo SINE Alu -32 280 1 1476 120 71 0 chr17 51155764 51155989 -34282491 + AluSg/x SINE Alu 68 308 -4 2134 123 7 3 chr17 51156109 51156409 -34282071 + AluSx SINE Alu 1 301 -11 2179 109 10 0 chr17 51156625 51156918 -34281562 - AluSx SINE Alu -16 296 1 2560 140 46 21 chr17 51157325 51157760 -34280720 - LTR47A LTR ERVL -6 446 1 1416 173 50 54 chr17 51157855 51158132 -34280348 - AluJb SINE Alu -36 276 1 755 232 7 0 chr17 51158184 51158339 -34280141 - AluJb SINE Alu -8 304 149 1097 98 78 0 chr17 51158695 51158848 -34279632 - AluY SINE Alu -13 298 134 2509 45 0 3 chr17 51158849 51159140 -34279340 - AluY SINE Alu -9 302 13 21 36 0 0 chr17 51159186 51159214 -34279266 + AT_rich Low_complexity Low_complexity 1 28 0 2407 84 3 0 chr17 51159620 51159917 -34278563 - AluSp SINE Alu -15 298 1 920 182 6 23 chr17 51159925 51160101 -34278379 - FAM SINE Alu -2 173 1 2260 99 17 0 chr17 51160405 51160707 -34277773 + AluSp SINE Alu 3 309 -4 1847 163 26 13 chr17 51160941 51161248 -34277232 - AluJb SINE Alu -1 311 1 2039 140 0 14 chr17 51161301 51161594 -34276886 + AluSx SINE Alu 1 289 -23 646 244 19 13 chr17 51161791 51161947 -34276533 + AluJo SINE Alu 29 185 -127 715 308 60 30 chr17 51162648 51162982 -34275498 + HAL1 LINE L1 5 348 -2159 1093 157 89 5 chr17 51162995 51163186 -34275294 - MER20 DNA MER1_type 0 219 13 750 154 52 7 chr17 51163285 51163421 -34275059 - MER105 DNA DNA -24 180 39 1771 272 161 54 chr17 51163540 51164828 -34273652 + HAL1 LINE L1 591 2017 -490 1824 155 0 7 chr17 51164833 51165117 -34273363 + AluSx SINE Alu 14 295 -17 257 244 231 0 chr17 51165233 51165389 -34273091 + HAL1 LINE L1 2284 2475 -32 2190 107 3 3 chr17 51166021 51166310 -34272170 - AluSx SINE Alu -23 289 1 1516 206 33 0 chr17 51167253 51167525 -34270955 + AluJb SINE Alu 1 281 -31 211 238 0 0 chr17 51167525 51167567 -34270913 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 1622 194 61 85 chr17 51167571 51167824 -34270656 + L1ME1 LINE L1 5367 5624 -542 2101 126 14 0 chr17 51167824 51168109 -34270371 - AluSx SINE Alu -23 289 1 1622 194 61 85 chr17 51168109 51168513 -34269967 + L1ME1 LINE L1 5624 5981 -185 641 96 138 0 chr17 51168556 51168650 -34269830 + FLAM_C SINE Alu 11 117 -26 2056 122 0 24 chr17 51168668 51168956 -34269524 - AluSx SINE Alu -31 281 1 1075 142 25 0 chr17 51170269 51170431 -34268049 - AluSc SINE Alu -14 295 130 222 37 0 0 chr17 51170431 51170458 -34268022 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1834 111 63 11 chr17 51170458 51170728 -34267752 - AluSx SINE Alu -28 284 1 278 174 10 41 chr17 51171227 51171325 -34267155 + GA-rich Low_complexity Low_complexity 3 97 0 243 88 0 0 chr17 51172664 51172698 -34265782 + (T)n Simple_repeat Simple_repeat 1 34 0 24 53 0 0 chr17 51172868 51172906 -34265574 + AT_rich Low_complexity Low_complexity 1 38 0 1702 170 10 27 chr17 51173774 51174074 -34264406 - AluJb SINE Alu -17 295 1 21 0 0 0 chr17 51174287 51174308 -34264172 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr17 51177769 51177795 -34260685 + AT_rich Low_complexity Low_complexity 1 26 0 476 266 133 9 chr17 51179700 51179918 -34258562 - L1MC5 LINE L1 -31 7930 7686 672 284 117 42 chr17 51181132 51181654 -34256826 + L1ME3A LINE L1 5610 6170 0 1873 128 14 17 chr17 51181779 51182075 -34256405 - AluSx SINE Alu -17 295 1 277 22 0 22 chr17 51182118 51182163 -34256317 + AluY SINE Alu 256 299 0 2194 95 10 10 chr17 51182959 51183254 -34255226 + AluSg SINE Alu 1 295 -15 2076 104 14 14 chr17 51183256 51183553 -34254927 + AluSg SINE Alu 1 297 -13 1434 163 54 23 chr17 51183704 51183962 -34254518 + AluSx SINE Alu 1 266 -46 440 149 0 0 chr17 51183991 51184065 -34254415 - FLAM_A SINE Alu 0 142 69 789 107 9 0 chr17 51184787 51184899 -34253581 + AluJo/FLAM SINE Alu 2 114 -198 1248 109 0 0 chr17 51184899 51185064 -34253416 - AluSg/x SINE Alu -14 298 134 24 0 0 0 chr17 51185073 51185097 -34253383 + AT_rich Low_complexity Low_complexity 1 24 0 2294 106 0 0 chr17 51185100 51185402 -34253078 + AluSx SINE Alu 1 302 -10 2107 101 31 3 chr17 51185506 51185794 -34252686 + AluSx SINE Alu 1 296 -16 2234 103 45 0 chr17 51185806 51186097 -34252383 + AluSx SINE Alu 3 306 -6 198 0 0 0 chr17 51186484 51186506 -34251974 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2012 100 3 31 chr17 51186509 51186799 -34251681 - AluSx SINE Alu -30 282 1 2051 94 7 68 chr17 51187064 51187373 -34251107 - AluSx SINE Alu -22 290 1 1765 133 75 25 chr17 51187392 51187670 -34250810 - AluJb SINE Alu -19 293 2 1309 168 111 4 chr17 51187782 51188044 -34250436 + AluJo SINE Alu 15 304 -8 2237 96 0 7 chr17 51188353 51188645 -34249835 - AluSc SINE Alu -17 292 3 426 300 55 67 chr17 51190157 51190500 -34247980 - L2 LINE L2 -8 3264 2926 739 171 229 0 chr17 51190576 51190781 -34247699 + Charlie5 DNA MER1_type 2372 2623 0 301 255 128 0 chr17 51190895 51190997 -34247483 - MIR SINE MIR -79 183 69 295 152 0 0 chr17 51191013 51191059 -34247421 - MER45C DNA AcHobo 0 953 908 496 216 60 0 chr17 51191066 51191182 -34247298 - MER45C DNA AcHobo -345 608 486 989 228 9 33 chr17 51191301 51191512 -34246968 - MER45C DNA AcHobo -747 206 1 551 244 154 9 chr17 51191902 51192123 -34246357 + MIR SINE MIR 10 262 0 2084 110 3 23 chr17 51193198 51193524 -34244956 + AluSx SINE Alu 1 312 0 226 335 22 66 chr17 51193568 51193603 -34244877 - MIR3 SINE MIR -23 185 150 776 240 18 0 chr17 51193603 51193774 -34244706 - MER5B DNA MER1_type -4 174 1 226 335 22 66 chr17 51193774 51193920 -34244560 - MIR3 SINE MIR -58 150 12 218 193 18 0 chr17 51194186 51194243 -34244237 + (CTCA)n Simple_repeat Simple_repeat 1 58 0 2111 95 7 46 chr17 51194296 51194601 -34243879 - AluSx SINE Alu -19 293 1 288 196 54 0 chr17 51194736 51194792 -34243688 - HAL1 LINE L1 -1113 1394 1336 594 125 0 0 chr17 51194894 51194982 -34243498 + AluJb SINE Alu 46 133 -179 1631 219 82 68 chr17 51194982 51195179 -34243301 - L1MC4 LINE L1 -929 7113 6920 2187 114 0 13 chr17 51195179 51195487 -34242993 - AluSx SINE Alu -6 306 3 1631 219 82 68 chr17 51195487 51195837 -34242643 - L1MC4 LINE L1 -1122 6920 6558 916 171 32 0 chr17 51195896 51196054 -34242426 - MLT1C LTR MaLR -50 417 255 421 196 151 0 chr17 51196054 51196172 -34242308 - L1MC4 LINE L1 -1273 6540 6410 * 635 204 149 69 chr17 51196167 51196239 -34242241 - L1MC4a LINE L1 -1558 6250 6185 1771 151 49 0 chr17 51196239 51196532 -34241948 - AluSx SINE Alu 0 309 4 635 204 149 69 chr17 51196532 51196733 -34241747 - L1MC4a LINE L1 -1623 6185 5954 2110 120 3 3 chr17 51196737 51197038 -34241442 + AluSg SINE Alu 1 301 -9 2290 76 10 0 chr17 51197039 51197329 -34241151 - AluY SINE Alu -18 293 1 2769 186 28 14 chr17 51197337 51197838 -34240642 + MER72 LTR ERV1 215 722 0 443 188 162 26 chr17 51197970 51198074 -34240406 + MER110 LTR ERV1 46 169 -322 553 55 0 121 chr17 51198074 51198125 -34240355 - MADE1 DNA Mariner 0 80 43 2355 88 0 3 chr17 51198125 51198421 -34240059 + AluSx SINE Alu 1 295 -17 553 55 0 121 chr17 51198421 51198460 -34240020 - MADE1 DNA Mariner -37 43 1 443 188 162 26 chr17 51198460 51198472 -34240008 + MER110 LTR ERV1 169 178 -313 1564 149 0 52 chr17 51198523 51198647 -34239833 + AluJb SINE Alu 6 110 -202 2327 80 3 0 chr17 51198647 51198935 -34239545 - AluY SINE Alu -22 289 1 1564 149 0 52 chr17 51198935 51199078 -34239402 + AluJb SINE Alu 110 259 -53 383 249 61 61 chr17 51199227 51199392 -34239088 + MIR SINE MIR 20 184 -78 2169 106 3 0 chr17 51199430 51199722 -34238758 - AluSq SINE Alu -17 296 4 632 159 159 0 chr17 51200192 51200305 -34238175 + AluJo/FLAM SINE Alu 2 132 -170 2142 82 7 0 chr17 51200305 51200574 -34237906 - AluY SINE Alu -17 294 24 2337 88 0 0 chr17 51200574 51200859 -34237621 + AluSp SINE Alu 14 298 -15 267 152 0 0 chr17 51200859 51200905 -34237575 + (CATA)n Simple_repeat Simple_repeat 3 48 0 1467 209 3 20 chr17 51200981 51201287 -34237193 + AluJo SINE Alu 1 301 -11 1057 174 0 0 chr17 51201664 51201825 -34236655 - AluJo/FRAM SINE Alu -18 294 134 2118 130 0 0 chr17 51201825 51202117 -34236363 - AluSx SINE Alu -19 293 2 1272 146 40 18 chr17 51202144 51202370 -34236110 + AluJb SINE Alu 81 311 -1 666 231 6 47 chr17 51202371 51202540 -34235940 + MLT1A1 LTR MaLR 146 307 -58 2462 86 0 0 chr17 51202540 51202843 -34235637 + AluSc SINE Alu 1 303 -6 915 129 11 84 chr17 51202843 51203021 -34235459 + AluJb SINE Alu 134 298 -14 253 143 89 0 chr17 51203024 51203080 -34235400 + MLT1A1 LTR MaLR 314 374 0 406 220 61 61 chr17 51203092 51203224 -34235256 + L2 LINE L2 3181 3312 -1 2168 142 0 0 chr17 51203441 51203751 -34234729 - AluSx SINE Alu -2 310 1 1047 208 0 5 chr17 51203751 51203948 -34234532 - MER20 DNA MER1_type -19 200 5 1148 192 0 28 chr17 51204579 51204793 -34233687 - AluJb SINE Alu -23 289 82 225 225 62 62 chr17 51204864 51204944 -34233536 + L2 LINE L2 3230 3309 -4 266 330 90 0 chr17 51204952 51205052 -34233428 + L2 LINE L2 3192 3300 -13 1464 187 3 78 chr17 51205187 51205519 -34232961 + AluJb SINE Alu 1 307 -5 942 167 0 0 chr17 51205522 51205666 -34232814 + AluJb SINE Alu 156 299 -13 1366 95 20 20 chr17 51205688 51205888 -34232592 - AluSq SINE Alu -17 296 97 2066 125 14 10 chr17 51205889 51206186 -34232294 - AluSx SINE Alu -14 298 1 23 0 0 0 chr17 51206186 51206209 -34232271 + AT_rich Low_complexity Low_complexity 1 23 0 2278 93 0 7 chr17 51206194 51206494 -34231986 - AluSg SINE Alu -12 298 1 180 0 0 0 chr17 51206500 51206520 -34231960 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1221 136 30 38 chr17 51207064 51207232 -34231248 - L1M4 LINE L1 -682 5492 5325 2053 128 4 0 chr17 51207232 51207568 -34230912 - AluSx SINE Alu 0 337 1 1221 136 30 38 chr17 51207568 51207709 -34230771 - L1M4 LINE L1 -849 5325 5184 2681 39 7 0 chr17 51207714 51208021 -34230459 - AluY SINE Alu -2 309 1 2434 96 0 6 chr17 51208185 51208498 -34229982 - AluSx SINE Alu 0 312 2 1566 161 111 7 chr17 51209049 51209329 -34229151 + AluSg1 SINE Alu 1 309 0 868 125 22 0 chr17 51209345 51209481 -34228999 + AluSg/x SINE Alu 174 312 0 194 302 0 0 chr17 51209503 51209546 -34228934 + L2 LINE L2 3251 3293 -20 2218 119 0 0 chr17 51209813 51210106 -34228374 - AluSg SINE Alu -17 293 1 296 309 18 9 chr17 51210987 51211097 -34227383 - LTR67 LTR ERVL -15 542 432 301 269 56 9 chr17 51211634 51211832 -34226648 - MIR SINE MIR -1 261 21 324 283 127 48 chr17 51211837 51212151 -34226329 - L2 LINE L2 -118 3195 2857 947 232 174 34 chr17 51212210 51212658 -34225822 + L2 LINE L2 2467 2977 -337 327 189 183 24 chr17 51212663 51212827 -34225653 - MLT1H LTR MaLR -250 299 110 433 271 19 0 chr17 51212993 51213100 -34225380 - L2 LINE L2 -5 3308 3200 762 117 0 0 chr17 51213102 51213222 -34225258 - AluSg/x SINE Alu 0 312 193 1134 82 0 0 chr17 51213222 51213368 -34225112 + AluSp/q SINE Alu 164 309 -4 1023 167 0 0 chr17 51213368 51213536 -34224944 - LTR26E LTR ERV1 -454 168 1 478 286 140 63 chr17 51213562 51213832 -34224648 - L2 LINE L2 -553 2761 2456 2242 101 0 14 chr17 51213832 51214129 -34224351 - AluSx SINE Alu -19 293 1 478 286 140 63 chr17 51214129 51214208 -34224272 - L2 LINE L2 -858 2456 2385 201 94 0 0 chr17 51214376 51214408 -34224072 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 207 359 22 56 chr17 51214410 51214641 -34223839 - L2 LINE L2 -15 3298 3076 2093 134 7 0 chr17 51214822 51215114 -34223366 + AluSx SINE Alu 2 295 -17 1034 154 6 12 chr17 51215114 51215276 -34223204 + AluJo/FRAM SINE Alu 134 294 -18 2261 128 0 0 chr17 51215279 51215585 -34222895 + AluSx SINE Alu 4 309 -3 268 303 52 72 chr17 51216016 51216267 -34222213 - L2 LINE L2 -792 2522 2277 446 263 76 50 chr17 51216305 51216376 -34222104 + MLT1J2 LTR MaLR 5 73 -377 1859 168 27 0 chr17 51216376 51216497 -34221983 + AluJb SINE Alu 1 117 -195 213 39 0 0 chr17 51216497 51216523 -34221957 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1859 168 27 0 chr17 51216523 51216699 -34221781 + AluJb SINE Alu 117 306 -6 446 263 76 50 chr17 51216699 51216825 -34221655 + MLT1J2 LTR MaLR 73 207 -243 828 224 47 0 chr17 51216825 51216995 -34221485 - MER58A DNA MER1_type -1 223 46 340 297 20 0 chr17 51217005 51217106 -34221374 + MLT1J1 LTR MaLR 197 299 -147 324 233 0 44 chr17 51217215 51217305 -34221175 + MLT1J2 LTR MaLR 365 450 0 1966 131 25 0 chr17 51218025 51218149 -34220331 + AluSx SINE Alu 1 120 -187 261 0 0 0 chr17 51218149 51218178 -34220302 + (CA)n Simple_repeat Simple_repeat 2 30 0 1966 131 25 0 chr17 51218178 51218353 -34220127 + AluSx SINE Alu 120 307 0 664 266 67 38 chr17 51218936 51218967 -34219513 + MLT1J1 LTR MaLR 3 32 -414 1954 158 89 8 chr17 51218967 51219186 -34219294 - MSTB LTR MaLR 0 426 226 1638 172 65 3 chr17 51219186 51219312 -34219168 + AluJb SINE Alu 1 118 -194 2302 129 0 0 chr17 51219312 51219622 -34218858 + AluSx SINE Alu 1 310 -2 1638 172 65 3 chr17 51219622 51219785 -34218695 + AluJb SINE Alu 118 308 -4 1954 158 89 8 chr17 51219785 51219958 -34218522 - MSTB LTR MaLR -200 226 2 664 266 67 38 chr17 51219958 51220193 -34218287 + MLT1J1 LTR MaLR 32 277 -169 1943 158 0 26 chr17 51220193 51220329 -34218151 + AluJb SINE Alu 1 139 -173 2147 101 0 17 chr17 51220329 51220671 -34217809 + AluSg SINE Alu 1 310 0 1943 158 0 26 chr17 51220671 51220844 -34217636 + AluJb SINE Alu 139 302 -10 437 211 42 0 chr17 51220870 51220965 -34217515 + MLT1J1 LTR MaLR 343 441 -5 2344 115 0 0 chr17 51221144 51221439 -34217041 + AluSx SINE Alu 1 295 -17 2549 70 0 0 chr17 51221441 51221742 -34216738 + AluSg SINE Alu 1 301 -9 1713 167 90 11 chr17 51221767 51222132 -34216348 - MSTD LTR MaLR 0 396 3 194 0 39 0 chr17 51222148 51222369 -34216111 + (TTTTG)n Simple_repeat Simple_repeat 1 229 0 1562 164 65 11 chr17 51222184 51222343 -34216137 - AluJo SINE Alu -22 290 108 194 0 39 0 chr17 51222343 51222369 -34216111 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 1562 164 65 11 chr17 51222369 51222484 -34215996 - AluJo SINE Alu -204 108 1 21 57 0 0 chr17 51222534 51222569 -34215911 + AT_rich Low_complexity Low_complexity 1 35 0 2244 18 7 0 chr17 51223207 51223479 -34215001 + L1PA5 LINE L1 5881 6154 0 257 280 127 17 chr17 51223893 51224011 -34214469 - MIR SINE MIR -115 147 17 1448 229 43 35 chr17 51224519 51224982 -34213498 - MLT1C LTR MaLR 0 467 1 276 317 113 34 chr17 51225766 51226059 -34212421 - L2 LINE L2 -348 2966 2651 188 357 111 4 chr17 51226124 51226359 -34212121 - L2 LINE L2 -1152 2162 1903 468 91 0 0 chr17 51226479 51226545 -34211935 + (GGA)n Simple_repeat Simple_repeat 2 67 0 214 296 10 20 chr17 51226800 51226898 -34211582 - MIR SINE MIR -84 124 28 765 272 68 65 chr17 51227545 51227957 -34210523 + MLT1J1 LTR MaLR 34 446 0 2145 123 7 0 chr17 51228459 51228761 -34209719 - AluJb SINE Alu -8 304 1 721 116 9 0 chr17 51229475 51229587 -34208893 - AluSx SINE Alu -6 304 192 1082 100 0 7 chr17 51229589 51229729 -34208751 - AluSx SINE Alu -173 140 2 436 183 115 10 chr17 51229731 51229835 -34208645 - MIR SINE MIR -37 225 111 800 109 7 36 chr17 51229917 51230054 -34208426 - FLAM_C SINE Alu 0 133 1 2231 96 3 20 chr17 51230337 51230630 -34207850 - AluSp SINE Alu -21 292 5 2122 118 13 30 chr17 51230635 51230939 -34207541 - AluSx SINE Alu -11 301 3 2078 169 27 27 chr17 51232047 51232126 -34206354 + L1MB5 LINE L1 5718 5796 -378 2492 99 0 0 chr17 51232126 51232438 -34206042 + AluSx SINE Alu 1 312 0 2078 169 27 27 chr17 51232438 51232807 -34205673 + L1MB5 LINE L1 5795 6166 -8 1114 159 101 44 chr17 51232926 51233153 -34205327 + AluJb SINE Alu 72 311 -1 228 135 0 0 chr17 51233158 51233195 -34205285 + (GGA)n Simple_repeat Simple_repeat 2 38 0 679 164 34 8 chr17 51233244 51233412 -34205068 + MLT1D LTR MaLR 284 505 0 2198 142 3 0 chr17 51233468 51233778 -34204702 + AluSx SINE Alu 1 311 -1 318 50 0 0 chr17 51234402 51234442 -34204038 + (GA)n Simple_repeat Simple_repeat 1 40 0 924 226 31 85 chr17 51234970 51235288 -34203192 + MLT1A1 LTR MaLR 4 304 -61 691 183 17 0 chr17 51235309 51235429 -34203051 - FLAM_C SINE Alu -19 124 3 438 171 0 0 chr17 51235431 51235507 -34202973 + MLT1A1 LTR MaLR 290 365 0 408 284 0 0 chr17 51235608 51235858 -34202622 + (TG)n Simple_repeat Simple_repeat 1 250 -324 2064 121 13 29 chr17 51235858 51236172 -34202308 - AluSp SINE Alu -4 309 1 408 284 0 0 chr17 51236172 51236182 -34202298 + (TG)n Simple_repeat Simple_repeat 249 574 0 228 300 0 50 chr17 51237208 51237308 -34201172 - MLT1L LTR MaLR -98 517 423 1835 142 9 49 chr17 51237337 51237661 -34200819 - AluJo SINE Alu -1 311 1 1140 179 66 0 chr17 51237764 51237960 -34200520 + AluJo SINE Alu 4 212 -100 852 162 10 91 chr17 51237960 51238094 -34200386 + L1MB5 LINE L1 5993 6107 -67 2187 122 0 0 chr17 51238094 51238390 -34200090 - AluSx SINE Alu -16 296 1 852 162 10 91 chr17 51238390 51238453 -34200027 + L1MB5 LINE L1 6107 6174 0 311 304 207 13 chr17 51238678 51238915 -34199565 - L2 LINE L2 -181 3091 2809 280 182 15 0 chr17 51239012 51239078 -34199402 + MER63 DNA MER1_type 870 936 -125 717 75 46 23 chr17 51239097 51239271 -34199209 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 837 22 44 44 chr17 51239294 51239474 -34199006 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1421 164 4 13 chr17 51239880 51240112 -34198368 + AluJo SINE Alu 2 231 -81 1116 114 8 106 chr17 51240112 51240213 -34198267 - L1MB4 LINE L1 -236 5944 5835 641 179 81 0 chr17 51240213 51240336 -34198144 + FLAM_C SINE Alu 1 133 0 1116 114 8 106 chr17 51240336 51240479 -34198001 - L1MB4 LINE L1 -345 5835 5724 1292 175 128 47 chr17 51240479 51240948 -34197532 + MER69 DNA AcHobo 2020 2526 0 466 305 99 8 chr17 51240963 51241225 -34197255 + L2 LINE L2 1929 2214 -1100 1038 153 114 6 chr17 51241225 51241401 -34197079 - AluJb SINE Alu -17 295 101 23 0 0 0 chr17 51241427 51241450 -34197030 + AT_rich Low_complexity Low_complexity 1 23 0 2033 128 28 0 chr17 51241455 51241743 -34196737 - AluSq SINE Alu -17 296 1 1805 177 22 37 chr17 51242060 51242467 -34196013 - L1MB5 LINE L1 0 6174 5774 334 308 126 68 chr17 51243374 51243637 -34194843 - L2 LINE L2 0 3272 2995 237 188 21 0 chr17 51244036 51244084 -34194396 + MER5B DNA MER1_type 1 49 -129 2414 98 0 9 chr17 51244090 51244405 -34194075 - AluSx SINE Alu 0 312 1 276 282 116 88 chr17 51244490 51245100 -34193380 - L2 LINE L2 -1208 2106 1480 4241 116 51 52 chr17 51246041 51246823 -34191657 + LTR1 LTR ERV1 1 781 -4 2469 74 7 0 chr17 51246828 51247125 -34191355 - AluSg SINE Alu -11 299 1 361 302 154 0 chr17 51247386 51247555 -34190925 + L2 LINE L2 2862 3056 -216 25 31 0 0 chr17 51247915 51247947 -34190533 + AT_rich Low_complexity Low_complexity 1 32 0 856 122 8 8 chr17 51247950 51248102 -34190378 - FLAM_C SINE Alu 0 152 1 918 221 89 148 chr17 51248106 51248680 -34189800 - MLT1H1 LTR MaLR -13 542 3 463 161 12 12 chr17 51249014 51249095 -34189385 - MLT1J2 LTR MaLR -303 147 67 299 241 152 0 chr17 51249135 51249214 -34189266 + MLT1L LTR MaLR 304 394 -221 280 234 156 47 chr17 51249188 51249316 -34189164 + MLT1J LTR MaLR 288 429 -82 * 272 257 87 87 chr17 51249518 51249566 -34188914 - L2 LINE L2 -339 2975 2928 2348 99 0 0 chr17 51249566 51249901 -34188579 + AluSc SINE Alu 1 335 0 272 257 87 87 chr17 51249901 51250057 -34188423 - L2 LINE L2 -385 2929 2770 1886 184 7 7 chr17 51250071 51250381 -34188099 + AluJb SINE Alu 3 312 0 233 230 0 27 chr17 51250389 51250463 -34188017 - L1MA10 LINE L1 -7 6327 6256 * 3437 202 42 60 chr17 51250442 51250954 -34187526 - L1ME1 LINE L1 -265 5901 5381 2210 127 16 0 chr17 51250954 51251261 -34187219 - AluSx SINE Alu 0 312 1 3437 202 42 60 chr17 51251261 51251461 -34187019 - L1ME1 LINE L1 -785 5381 5179 1457 174 0 0 chr17 51251461 51251685 -34186795 - AluJb SINE Alu -2 310 87 3437 202 42 60 chr17 51251685 51251782 -34186698 - L1ME1 LINE L1 -987 5179 5082 2177 128 0 0 chr17 51251782 51252078 -34186402 + AluSx SINE Alu 3 298 -14 3437 202 42 60 chr17 51252078 51252694 -34185786 - L1ME1 LINE L1 -1084 5082 4511 1783 119 4 0 chr17 51252694 51252929 -34185551 - AluSx SINE Alu -76 236 1 3437 202 42 60 chr17 51252929 51253150 -34185330 - L1ME1 LINE L1 -1655 4511 4287 573 216 7 61 chr17 51253458 51253560 -34184920 - MER112 DNA MER1_type -120 140 47 1840 147 39 3 chr17 51253560 51253846 -34184634 + AluJb SINE Alu 1 296 -16 573 216 7 61 chr17 51253846 51253891 -34184589 - MER112 DNA MER1_type -213 47 1 1255 194 154 80 chr17 51254342 51254790 -34183690 - MLT1C LTR MaLR 0 467 25 2264 129 0 0 chr17 51255292 51255603 -34182877 - AluSx SINE Alu -1 311 1 244 235 15 15 chr17 51256098 51256166 -34182314 - MIR SINE MIR -117 91 24 524 150 0 0 chr17 51456714 51456794 -33981686 - AluJ/FLAM SINE Alu -232 80 1 208 344 205 7 chr17 51458279 51458430 -33980050 + L2 LINE L2 2532 2712 -602 1156 175 14 24 chr17 51458769 51458980 -33979500 + MER3 DNA MER1_type 1 209 0 2071 136 0 22 chr17 51459265 51459582 -33978898 + AluSx SINE Alu 1 310 -2 1951 108 51 0 chr17 51460235 51460531 -33977949 + AluSx SINE Alu 1 311 -1 2116 247 51 8 chr17 51460896 51461503 -33976977 + L1ME1 LINE L1 5545 6333 -1 371 222 35 90 chr17 51462741 51462885 -33975595 + MIR SINE MIR 16 151 -57 2079 84 28 3 chr17 51463032 51463316 -33975164 - AluSg SINE Alu -19 291 1 2325 86 0 0 chr17 51463931 51464233 -33974247 + AluSx SINE Alu 5 306 -6 1762 90 27 132 chr17 51464233 51464566 -33973914 + AluSx SINE Alu 1 298 -14 204 329 37 0 chr17 51464569 51464651 -33973829 + L2 LINE L2 2290 2374 -940 289 330 0 0 chr17 51465044 51465132 -33973348 - MIR3 SINE MIR -54 154 67 578 346 132 11 chr17 51465182 51465561 -33972919 + L2 LINE L2 2844 3268 -4 509 305 95 11 chr17 51465607 51465797 -33972683 - MIR SINE MIR -32 230 25 2065 135 3 0 chr17 51465799 51466103 -33972377 - AluSx SINE Alu -7 305 1 440 299 123 5 chr17 51466942 51467129 -33971351 - MIR SINE MIR -29 233 25 501 299 118 5 chr17 51467291 51467512 -33970968 + MIR SINE MIR 8 253 -9 2112 113 3 0 chr17 51468078 51468370 -33970110 + AluSx SINE Alu 1 293 -19 1295 182 49 49 chr17 51469458 51469507 -33968973 - MER33 DNA MER1_type -2261 324 276 2358 84 0 23 chr17 51469507 51469817 -33968663 - AluSx SINE Alu -9 303 1 1295 182 49 49 chr17 51469817 51470091 -33968389 - MER33 DNA MER1_type -2308 277 1 357 236 40 14 chr17 51470231 51470358 -33968122 + MIR SINE MIR 5 144 -64 237 65 0 0 chr17 51470586 51470617 -33967863 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2034 96 43 10 chr17 51470621 51470923 -33967557 - AluSx SINE Alu 0 312 1 319 290 90 28 chr17 51471113 51471258 -33967222 + L1ME4a LINE L1 5967 6120 -1 2087 104 0 0 chr17 51471286 51471598 -33966882 - AluSg SINE Alu 0 312 1 285 98 0 0 chr17 51472485 51472526 -33965954 + (TCCCC)n Simple_repeat Simple_repeat 1 41 0 2104 118 3 0 chr17 51472526 51472815 -33965665 - AluSx SINE Alu -22 290 1 978 176 12 90 chr17 51472829 51473073 -33965407 - AluJo SINE Alu -1 311 87 212 274 0 0 chr17 51473242 51473293 -33965187 - MIR SINE MIR -114 148 98 221 268 67 144 chr17 51473466 51473660 -33964820 - MIR SINE MIR -51 211 33 255 308 22 22 chr17 51474124 51474215 -33964265 + MIR SINE MIR 156 246 -16 21 36 0 0 chr17 51474218 51474246 -33964234 + GC_rich Low_complexity Low_complexity 1 28 0 189 0 0 0 chr17 51475876 51475897 -33962583 + (GGGTG)n Simple_repeat Simple_repeat 3 23 0 258 340 9 60 chr17 51476136 51476351 -33962129 + MIR3 SINE MIR 5 208 0 466 293 79 0 chr17 51476552 51476692 -33961788 - MIR SINE MIR -65 197 47 373 205 12 194 chr17 51477283 51477330 -33961150 - MIR SINE MIR -10 252 198 222 37 0 0 chr17 51477330 51477357 -33961123 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2226 86 0 0 chr17 51477361 51477641 -33960839 - AluSx SINE Alu -32 280 1 373 205 12 194 chr17 51477641 51477849 -33960631 - MIR SINE MIR -67 195 42 1919 142 19 13 chr17 51478403 51478713 -33959767 - AluSx SINE Alu 0 312 1 1664 180 23 3 chr17 51478878 51479178 -33959302 - AluJb SINE Alu -6 306 1 319 246 119 8 chr17 51479570 51479688 -33958792 + L1ME4a LINE L1 5984 6114 -7 391 227 60 82 chr17 51480982 51481143 -33957337 - MIR SINE MIR -65 143 40 1507 170 14 34 chr17 51481420 51481714 -33956766 - AluJo SINE Alu -18 294 7 187 206 0 0 chr17 51482106 51482140 -33956340 - L2 LINE L2 -12 3260 3227 815 166 7 0 chr17 51482445 51482584 -33955896 - MER5A DNA MER1_type -22 167 28 603 210 32 25 chr17 51482583 51482740 -33955740 - MER5B DNA MER1_type -20 158 1 * 562 296 0 13 chr17 51483308 51483460 -33955020 + MIR3 SINE MIR 31 180 -28 568 249 124 14 chr17 51483705 51483914 -33954566 + MIR SINE MIR 12 243 -19 2114 109 17 0 chr17 51484000 51484293 -33954187 - AluSx SINE Alu -14 298 1 348 125 188 0 chr17 51484535 51484599 -33953881 + MIR SINE MIR 77 152 -110 697 202 0 0 chr17 51484599 51484728 -33953752 + L2 LINE L2 3185 3313 0 258 221 103 0 chr17 51484736 51484804 -33953676 + MIR SINE MIR 178 252 -10 180 158 26 0 chr17 51485069 51485107 -33953373 - L2 LINE L2 0 3313 3275 336 333 92 50 chr17 51485690 51485972 -33952508 + L2 LINE L2 2946 3239 -33 1085 272 114 29 chr17 51485988 51486480 -33952000 - MLT1H1 LTR MaLR -12 543 10 742 104 0 0 chr17 51486581 51486687 -33951793 - AluSg/x SINE Alu -6 306 201 810 139 0 0 chr17 51486687 51486802 -33951678 - AluJo/FLAM SINE Alu -197 115 1 435 323 48 32 chr17 51486868 51487057 -33951423 + MIR3 SINE MIR 2 193 -15 488 318 72 36 chr17 51487410 51487512 -33950968 - L1ME4a LINE L1 -187 5934 5837 2385 80 3 0 chr17 51487512 51487823 -33950657 - AluSx SINE Alu 0 312 1 488 318 72 36 chr17 51487823 51487943 -33950537 - L1ME4a LINE L1 -284 5837 5704 325 185 0 0 chr17 51488865 51488919 -33949561 + AluJ/FRAM SINE Alu 214 267 -35 440 18 18 0 chr17 51488927 51488984 -33949496 + (GA)n Simple_repeat Simple_repeat 1 58 0 403 247 0 0 chr17 51490048 51490145 -33948335 + MER103 DNA DNA 24 120 -46 2241 105 0 0 chr17 51490318 51490614 -33947866 + AluSg SINE Alu 1 296 -14 1952 147 50 35 chr17 51490632 51490907 -33947573 - MER7A DNA MER2_type -2694 344 63 2033 125 0 3 chr17 51490907 51491215 -33947265 + AluSq SINE Alu 1 307 0 1952 147 50 35 chr17 51491215 51491279 -33947201 - MER7A DNA MER2_type -2975 63 1 310 282 239 0 chr17 51492734 51492876 -33945604 + L1ME4a LINE L1 5841 6016 -105 491 229 78 39 chr17 51492884 51493038 -33945442 - L2 LINE L2 -7 3306 3141 1863 174 0 0 chr17 51493038 51493336 -33945144 + AluJb SINE Alu 1 298 -14 491 229 78 39 chr17 51493336 51493386 -33945094 - L2 LINE L2 -172 3141 3094 302 200 0 17 chr17 51493433 51493493 -33944987 - L1MC2 LINE L1 -11 6333 6275 1911 56 0 0 chr17 51493495 51493729 -33944751 + L1PA3 LINE L1 5921 6154 -1 442 180 68 64 chr17 51493741 51493907 -33944573 - L1MC2 LINE L1 -5 7702 7538 1631 151 40 25 chr17 51493907 51494216 -33944264 - AluJo SINE Alu 0 313 1 442 180 68 64 chr17 51494216 51494758 -33943722 - L1MC2 LINE L1 -169 7538 7000 2210 101 0 7 chr17 51494758 51495055 -33943425 + AluSc SINE Alu 1 295 -14 442 180 68 64 chr17 51495055 51495425 -33943055 - L1MC2 LINE L1 -707 7000 6127 2281 73 0 48 chr17 51495426 51495742 -33942738 - AluSq SINE Alu -12 301 1 281 367 25 0 chr17 51495752 51495872 -33942608 - L2 LINE L2 -244 3069 2947 1414 249 210 5 chr17 51495971 51496570 -33941910 - L2 LINE L2 -353 2961 2240 369 232 24 32 chr17 51497065 51497190 -33941290 + GA-rich Low_complexity Low_complexity 4 127 0 783 259 148 14 chr17 51497247 51497852 -33940628 + L2 LINE L2 2454 3171 -142 294 29 0 0 chr17 51497852 51497887 -33940593 + (CA)n Simple_repeat Simple_repeat 2 36 0 783 259 148 14 chr17 51497887 51497898 -33940582 + L2 LINE L2 3171 3179 -134 1381 141 0 0 chr17 51497899 51498097 -33940383 - AluSg/x SINE Alu -28 284 87 361 328 74 0 chr17 51498113 51498235 -33940245 + L2 LINE L2 3183 3313 0 2267 103 0 3 chr17 51498379 51498681 -33939799 + AluSx SINE Alu 3 303 -9 2036 134 10 0 chr17 51498851 51499157 -33939323 - AluSq SINE Alu -4 309 1 852 182 28 11 chr17 51499884 51500050 -33938430 - AluJb SINE Alu -11 301 139 213 39 0 0 chr17 51500050 51500076 -33938404 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1856 124 15 0 chr17 51500076 51500343 -33938137 - AluSx SINE Alu -30 282 12 852 182 28 11 chr17 51500343 51500356 -33938124 - AluJb SINE Alu -172 140 118 1784 276 31 11 chr17 51500431 51501004 -33937476 + L1ME3A LINE L1 5586 6170 0 221 340 48 48 chr17 51501012 51501200 -33937280 - L3b LINE CR1 -227 1356 1169 1846 140 27 3 chr17 51502285 51502578 -33935902 - AluJo SINE Alu -6 306 7 2239 102 0 0 chr17 51502596 51502890 -33935590 - AluSg SINE Alu -16 294 1 237 290 46 99 chr17 51502890 51503021 -33935459 - L2 LINE L2 -10 3303 3180 265 237 0 0 chr17 51503447 51503506 -33934974 + MIR3 SINE MIR 104 162 -46 324 223 179 18 chr17 51504341 51504453 -33934027 - MIR SINE MIR -81 181 52 319 361 59 35 chr17 51504920 51505122 -33933358 - MIR SINE MIR 0 262 56 327 78 0 0 chr17 51505614 51505665 -33932815 + (TG)n Simple_repeat Simple_repeat 1 51 0 1955 146 0 0 chr17 51505743 51506030 -33932450 + AluSx SINE Alu 6 292 -20 294 258 142 17 chr17 51507736 51507856 -33930624 + L2 LINE L2 2341 2475 -839 588 234 30 31 chr17 51507971 51508132 -33930348 + MIR SINE MIR 33 196 -48 2019 96 53 0 chr17 51508132 51508401 -33930079 + AluSx SINE Alu 1 303 -9 208 0 0 0 chr17 51508401 51508424 -33930056 + (TAAA)n Simple_repeat Simple_repeat 2 124 0 2019 96 53 0 chr17 51508424 51508435 -33930045 + AluSx SINE Alu 303 312 0 588 234 30 31 chr17 51508435 51508482 -33929998 + MIR SINE MIR 196 242 -2 2516 48 0 3 chr17 51508483 51508778 -33929702 + AluY SINE Alu 1 294 -17 336 200 0 0 chr17 51508798 51508853 -33929627 - MIR3 SINE MIR -39 169 115 2456 94 0 0 chr17 51509514 51509823 -33928657 + AluSx SINE Alu 1 309 -3 865 188 177 0 chr17 51509905 51510091 -33928389 + MER20 DNA MER1_type 1 219 0 1981 151 0 13 chr17 51510390 51510702 -33927778 + AluJb SINE Alu 3 310 -2 322 273 122 0 chr17 51512620 51512759 -33925721 - MIR3 SINE MIR -14 194 39 2375 95 0 9 chr17 51513182 51513497 -33924983 - AluSx SINE Alu 0 312 1 180 267 167 0 chr17 51513682 51513742 -33924738 + MIR3 SINE MIR 7 76 -132 183 279 107 50 chr17 51514454 51514594 -33923886 - MIR3 SINE MIR -11 197 50 873 155 16 0 chr17 51514600 51514729 -33923751 - FLAM_C SINE Alu -2 131 1 1862 144 3 35 chr17 51514733 51515045 -33923435 - AluJo SINE Alu -10 302 1 207 329 44 0 chr17 51516667 51516736 -33921744 - MIR SINE MIR -104 104 32 329 149 15 45 chr17 51517110 51517177 -33921303 - AluJ/FLAM SINE Alu -237 65 1 1418 146 0 18 chr17 51517463 51517689 -33920791 - AluJb SINE Alu -90 222 1 216 308 56 37 chr17 51517920 51518027 -33920453 - MIR3 SINE MIR -4 204 96 474 179 0 0 chr17 51520056 51520134 -33918346 - MER116 DNA Mariner 0 80 3 2306 102 0 0 chr17 51521300 51521594 -33916886 + AluSx SINE Alu 6 299 -13 1988 137 0 26 chr17 51521737 51522050 -33916430 - AluJb SINE Alu -7 305 1 2264 101 0 7 chr17 51525438 51525734 -33912746 + AluSx SINE Alu 1 294 -18 544 274 133 52 chr17 51525791 51525913 -33912567 + L2 LINE L2 2018 2129 -1185 1541 119 0 0 chr17 51525913 51526123 -33912357 - AluSg/x SINE Alu -3 309 100 544 274 133 52 chr17 51526123 51526383 -33912097 + L2 LINE L2 2129 2431 -883 344 300 114 79 chr17 51526681 51527024 -33911456 + L2 LINE L2 2918 3272 0 288 203 87 14 chr17 51527045 51527114 -33911366 - MIR SINE MIR -102 160 87 2078 139 17 0 chr17 51527225 51527526 -33910954 + AluSx SINE Alu 1 306 -6 1404 196 79 0 chr17 51528034 51528334 -33910146 + AluJo SINE Alu 1 321 0 2307 90 20 3 chr17 51528449 51528749 -33909731 - AluSc SINE Alu -4 305 1 2227 114 3 0 chr17 51528757 51529056 -33909424 - AluSq SINE Alu -13 300 1 742 161 42 8 chr17 51529065 51529183 -33909297 - FLAM_C SINE Alu -11 122 1 345 275 154 42 chr17 51529905 51530340 -33908140 + L1ME3A LINE L1 5625 5907 -271 2522 155 31 31 chr17 51530575 51530989 -33907491 + MLT2D LTR ERVL 1 414 0 264 222 183 53 chr17 51531213 51531380 -33907100 - MIR3 SINE MIR -75 187 8 24 32 0 0 chr17 51532196 51532227 -33906253 + AT_rich Low_complexity Low_complexity 1 31 0 1561 166 72 4 chr17 51534610 51534887 -33903593 + AluJo SINE Alu 1 296 -16 387 360 98 40 chr17 51535462 51535790 -33902690 - L2 LINE L2 -47 3225 2879 365 256 283 16 chr17 51535866 51536057 -33902423 - L2 LINE L2 -621 2693 2452 1812 159 16 16 chr17 51536079 51536388 -33902092 + AluJb SINE Alu 1 309 -3 1065 145 0 19 chr17 51536505 51536664 -33901816 + FAM SINE Alu 2 157 -18 2293 109 3 3 chr17 51537182 51537494 -33900986 - AluSq SINE Alu -1 312 1 896 107 38 8 chr17 51537574 51537705 -33900775 + AluJb SINE Alu 1 135 -177 1730 178 3 16 chr17 51537705 51538009 -33900471 + AluJo SINE Alu 1 300 -12 551 195 0 0 chr17 51538066 51538153 -33900327 + Tigger4(Zombi) DNA MER2_type 1 87 -2644 373 129 0 16 chr17 51538150 51538212 -33900268 + Tigger4(Zombi) DNA MER2_type 2295 2355 -376 * 1062 108 0 36 chr17 51538210 51538376 -33900104 + Tigger4(Zombi) DNA MER2_type 2572 2731 0 750 140 12 18 chr17 51538382 51538553 -33899927 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 2293 100 3 10 chr17 51538740 51539051 -33899429 + AluSg SINE Alu 1 309 -1 269 288 0 14 chr17 51539831 51539904 -33898576 - L3 LINE CR1 -18 1559 1488 535 271 8 0 chr17 51540696 51540825 -33897655 + MIR SINE MIR 59 188 -74 2435 70 3 3 chr17 51541394 51541696 -33896784 + AluY SINE Alu 1 302 -9 753 241 62 20 chr17 51543121 51543316 -33895164 + MER58 DNA MER1_type 2 204 -2216 857 188 135 0 chr17 51543371 51543541 -33894939 - MER46A DNA MER2_type 0 236 44 964 196 0 22 chr17 51544321 51544505 -33893975 - AluJb SINE Alu -4 308 129 2161 138 0 0 chr17 51544923 51545221 -33893259 + AluSx SINE Alu 1 298 -14 976 62 86 0 chr17 51545232 51545360 -33893120 + MER85 DNA T2_type 1 139 0 1736 171 3 7 chr17 51545536 51545834 -33892646 - AluJo SINE Alu -6 306 10 2091 176 30 0 chr17 51546094 51546430 -33892050 + MER7A DNA MER2_type 2 345 -1 2461 64 0 3 chr17 51547021 51547317 -33891163 - AluY SINE Alu -16 295 1 315 225 133 79 chr17 51547841 51547897 -33890583 + Charlie7 DNA MER1_type 429 481 -2131 1989 139 20 0 chr17 51547897 51548191 -33890289 - AluSx SINE Alu -12 300 1 315 225 133 79 chr17 51548191 51548450 -33890030 + Charlie7 DNA MER1_type 481 761 -1851 430 131 50 61 chr17 51548483 51548582 -33889898 - L1MB4 LINE L1 -2 6178 6081 2242 115 0 0 chr17 51548617 51548913 -33889567 - AluSq SINE Alu -17 296 1 739 174 0 23 chr17 51548913 51549045 -33889435 - AluJ SINE Alu -1 311 183 * 844 193 7 0 chr17 51549036 51549176 -33889304 - AluJ SINE Alu -170 142 2 892 169 0 0 chr17 51549211 51549353 -33889127 - L1MB4 LINE L1 -216 5964 5823 255 56 0 0 chr17 51549363 51549399 -33889081 + L1MB1 LINE L1 6097 6132 -36 1725 134 7 39 chr17 51549405 51549688 -33888792 + AluJb SINE Alu 28 301 -11 666 161 0 0 chr17 51549711 51549804 -33888676 + AluSx SINE Alu 2 94 -219 2148 127 0 3 chr17 51549805 51550104 -33888376 + AluSg SINE Alu 2 299 -11 1763 90 0 5 chr17 51550104 51550326 -33888154 + AluSx SINE Alu 80 301 -9 394 116 0 7 chr17 51550366 51550433 -33888047 - L1MB5 LINE L1 -343 5831 5768 364 255 136 68 chr17 51550478 51550713 -33887767 + L2 LINE L2 3034 3284 -29 2753 76 14 14 chr17 51551061 51551416 -33887064 + THE1A LTR MaLR 1 355 0 1727 172 11 4 chr17 51551463 51551742 -33886738 + AluJb SINE Alu 6 286 -26 459 194 47 47 chr17 51551776 51551905 -33886575 + L1ME2 LINE L1 6034 6162 -2 1783 150 10 14 chr17 51552649 51552942 -33885538 - AluJo SINE Alu -8 304 13 2092 106 14 0 chr17 51553847 51554152 -33884328 + AluSq SINE Alu 1 309 0 239 211 19 0 chr17 51554338 51554390 -33884090 - L2 LINE L2 -5 3267 3215 361 267 96 30 chr17 51554666 51554801 -33883679 - MIR SINE MIR -85 177 34 2418 91 10 0 chr17 51555012 51555319 -33883161 - AluSg SINE Alu 0 310 1 23 0 0 0 chr17 51556478 51556501 -33881979 + AT_rich Low_complexity Low_complexity 1 23 0 1976 108 14 4 chr17 51557445 51557722 -33880758 + AluSx SINE Alu 5 284 -28 399 41 0 0 chr17 51557733 51557782 -33880698 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 1711 190 0 3 chr17 51559017 51559306 -33879174 - AluJo SINE Alu -24 288 1 23 54 0 0 chr17 51559442 51559479 -33879001 + AT_rich Low_complexity Low_complexity 1 37 0 1455 189 91 0 chr17 51559490 51559776 -33878704 + AluJb SINE Alu 1 312 0 291 182 0 91 chr17 51559778 51559798 -33878682 + AluJb SINE Alu 118 138 -164 594 172 107 25 chr17 51559798 51559920 -33878560 + FLAM_C SINE Alu 1 132 -1 291 182 0 91 chr17 51559920 51559976 -33878504 + AluJb SINE Alu 138 187 -115 1422 128 8 49 chr17 51559997 51560240 -33878240 + AluJo SINE Alu 57 289 -23 598 319 45 8 chr17 51560809 51561096 -33877384 + L1ME3 LINE L1 5617 5914 -276 1611 177 32 3 chr17 51561445 51561728 -33876752 + AluSx SINE Alu 1 291 -21 21 0 0 0 chr17 51561849 51561870 -33876610 + AT_rich Low_complexity Low_complexity 1 21 0 2245 120 0 0 chr17 51562558 51562867 -33875613 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr17 51564100 51564129 -33874351 + (TG)n Simple_repeat Simple_repeat 1 29 0 25 31 0 0 chr17 51564469 51564501 -33873979 + AT_rich Low_complexity Low_complexity 1 32 0 229 48 71 0 chr17 51565348 51565390 -33873090 + A-rich Low_complexity Low_complexity 2 46 0 343 341 37 89 chr17 51567331 51567545 -33870935 - L2 LINE L2 -52 3220 3018 252 86 0 0 chr17 51567572 51567607 -33870873 + (TA)n Simple_repeat Simple_repeat 1 35 0 402 318 106 52 chr17 51567675 51568100 -33870380 - L2 LINE L2 -886 2428 1981 690 202 0 8 chr17 51568173 51568297 -33870183 + FLAM_A SINE Alu 5 127 -6 2369 94 0 0 chr17 51568375 51568672 -33869808 - AluSx SINE Alu -15 297 1 25 31 0 0 chr17 51569219 51569251 -33869229 + AT_rich Low_complexity Low_complexity 1 32 0 2139 132 0 0 chr17 51569279 51569574 -33868906 + AluSg SINE Alu 1 295 -15 351 0 0 0 chr17 51569712 51569751 -33868729 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1606 150 64 0 chr17 51569754 51570020 -33868460 - AluJb SINE Alu -29 283 1 436 248 20 74 chr17 51570315 51570366 -33868114 - MIR3 SINE MIR -3 205 153 1018 150 80 28 chr17 51570366 51570579 -33867901 - MER58A DNA MER1_type 0 224 1 436 248 20 74 chr17 51570579 51570676 -33867804 - MIR3 SINE MIR -55 153 65 384 77 0 0 chr17 51570870 51570922 -33867558 + (CA)n Simple_repeat Simple_repeat 1 52 0 372 312 84 55 chr17 51571631 51571939 -33866541 + L1MC4a LINE L1 5647 5963 -1845 715 249 59 67 chr17 51571976 51572349 -33866131 + HAL1 LINE L1 2 371 -2136 2007 249 147 52 chr17 51572469 51573624 -33864856 + HAL1 LINE L1 823 1867 -640 2163 102 20 0 chr17 51573624 51573918 -33864562 + AluSg SINE Alu 9 308 -2 2007 249 147 52 chr17 51573918 51574101 -33864379 + HAL1 LINE L1 1867 2031 -476 1069 193 0 10 chr17 51574101 51574303 -33864177 - MER105 DNA DNA -1 203 4 2007 249 147 52 chr17 51574303 51574376 -33864104 + HAL1 LINE L1 2031 2369 -138 389 245 11 11 chr17 51574391 51574485 -33863995 + HAL1 LINE L1 1675 1768 -739 300 27 0 0 chr17 51574509 51574546 -33863934 + (GA)n Simple_repeat Simple_repeat 1 37 0 502 250 59 15 chr17 51574550 51574686 -33863794 + MIR SINE MIR 48 189 -73 427 266 291 5 chr17 51574708 51574911 -33863569 - MIR SINE MIR 0 262 2 1582 116 54 27 chr17 51575079 51575257 -33863223 + AluSx SINE Alu 29 218 -94 198 71 0 0 chr17 51575257 51575285 -33863195 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 1582 116 54 27 chr17 51575285 51575364 -33863116 + AluSx SINE Alu 218 293 -19 1266 143 58 130 chr17 51575925 51576265 -33862215 + MLT1A1 LTR MaLR 1 364 -1 2134 99 17 14 chr17 51576265 51576557 -33861923 + AluSx SINE Alu 1 293 -19 2289 67 3 0 chr17 51576560 51576874 -33861606 + AluSp SINE Alu 1 315 0 1266 143 58 130 chr17 51576874 51576921 -33861559 + MLT1A1 LTR MaLR 316 365 0 1936 134 72 0 chr17 51577707 51578027 -33860453 + MER2 DNA MER2_type 1 343 -1 32 0 0 0 chr17 51578359 51578391 -33860089 + AT_rich Low_complexity Low_complexity 1 32 0 2323 85 0 0 chr17 51578839 51579132 -33859348 + AluSg SINE Alu 8 300 -10 257 109 263 0 chr17 51579160 51579215 -33859265 + FRAM/FAM SINE Alu 14 72 -94 376 319 25 8 chr17 51579263 51579382 -33859098 + MER5A DNA MER1_type 68 188 -1 294 29 0 0 chr17 51579621 51579656 -33858824 + (TAA)n Simple_repeat Simple_repeat 1 35 0 2155 79 32 4 chr17 51579656 51579965 -33858515 + AluSp SINE Alu 1 317 0 465 315 88 0 chr17 51579991 51580172 -33858308 + MIR SINE MIR 66 262 0 212 200 0 55 chr17 51580204 51580314 -33858166 + (TTA)n Simple_repeat Simple_repeat 3 106 0 1777 173 0 7 chr17 51580655 51580955 -33857525 - AluSx SINE Alu -14 298 1 1473 105 148 12 chr17 51581003 51581260 -33857220 + AluSg1 SINE Alu 1 292 -17 206 177 48 16 chr17 51581314 51581376 -33857104 + (TTATA)n Simple_repeat Simple_repeat 5 68 0 2038 119 45 0 chr17 51581433 51581719 -33856761 + AluSp SINE Alu 1 299 -14 401 174 186 12 chr17 51581739 51581825 -33856655 + FLAM_A SINE Alu 20 120 -13 445 69 42 0 chr17 51581826 51581898 -33856582 + L1MB1 LINE L1 6093 6167 -1 933 92 0 0 chr17 51581904 51582024 -33856456 + AluSg/x SINE Alu 177 296 -14 2216 123 7 0 chr17 51582026 51582336 -33856144 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 51582451 51582473 -33856007 + AT_rich Low_complexity Low_complexity 1 22 0 1460 172 0 8 chr17 51582597 51582841 -33855639 + AluSx SINE Alu 1 242 -70 246 62 0 0 chr17 51583303 51583335 -33855145 + (A)n Simple_repeat Simple_repeat 1 32 0 2496 70 3 3 chr17 51583653 51583965 -33854515 - AluSp SINE Alu -1 312 1 1968 159 0 10 chr17 51584139 51584440 -33854040 + AluSx SINE Alu 1 298 -14 6716 131 54 21 chr17 51584506 51585694 -33852786 + Tigger3b DNA MER2_type 4 1230 -1 3396 158 110 15 chr17 51586187 51586917 -33851563 + L1MB2 LINE L1 5362 6139 -32 244 158 0 171 chr17 51587857 51587903 -33850577 + L2 LINE L2 3200 3228 -44 1954 130 17 20 chr17 51587903 51588203 -33850277 - AluSg SINE Alu -11 299 1 244 158 0 171 chr17 51588203 51588238 -33850242 + L2 LINE L2 3228 3267 -5 1847 151 3 10 chr17 51589151 51589450 -33849030 - AluJb SINE Alu -13 299 3 2208 99 7 0 chr17 51589643 51589947 -33848533 + AluSp SINE Alu 1 306 -7 584 140 185 19 chr17 51590019 51590176 -33848304 - L1MA9 LINE L1 0 6312 6130 682 229 0 0 chr17 51590518 51590649 -33847831 - FAM SINE Alu -21 164 34 210 283 67 0 chr17 51590722 51590782 -33847698 + L2 LINE L2 3245 3308 -5 2130 166 198 153 chr17 51591311 51592017 -33846463 + L1MC4a LINE L1 6251 6095 -238 743 192 0 0 chr17 51592017 51592142 -33846338 + FLAM_C SINE Alu 1 125 -18 2130 166 198 153 chr17 51592142 51592393 -33846087 + L1MC4a LINE L1 6094 6332 -1 269 219 0 41 chr17 51592942 51593015 -33845465 + L1MC/D LINE L1 5691 5760 -2048 211 293 168 34 chr17 51593038 51593485 -33844995 + L2 LINE L2 1563 2069 -1245 1071 171 22 6 chr17 51594106 51594287 -33844193 - AluJ SINE Alu -22 290 107 21 36 0 0 chr17 51594303 51594331 -33844149 + AT_rich Low_complexity Low_complexity 1 28 0 2076 112 38 0 chr17 51594331 51594618 -33843862 + AluSx SINE Alu 1 298 -14 196 143 36 0 chr17 51594619 51594675 -33843805 + (TA)n Simple_repeat Simple_repeat 1 58 0 324 0 0 0 chr17 51594675 51594711 -33843769 + (TG)n Simple_repeat Simple_repeat 2 37 0 715 172 9 0 chr17 51594738 51594854 -33843626 - AluJ SINE Alu -185 117 1 983 273 142 26 chr17 51595167 51595589 -33842891 - L2 LINE L2 -1018 2296 1826 315 316 150 19 chr17 51595595 51595861 -33842619 + L2 LINE L2 2901 3201 -112 2198 99 3 42 chr17 51596942 51597254 -33841226 + AluSx SINE Alu 1 300 -12 529 215 75 145 chr17 51597533 51597761 -33840719 - L2 LINE L2 -2 3311 3100 2031 121 4 0 chr17 51599906 51600179 -33838301 - AluSx SINE Alu -38 274 1 451 317 153 10 chr17 51601582 51601784 -33836696 - MIR SINE MIR -11 251 21 428 251 166 6 chr17 51602031 51602194 -33836286 - MIR SINE MIR -65 197 9 31 26 0 0 chr17 51602575 51602613 -33835867 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr17 51605597 51605625 -33832855 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr17 51605849 51605891 -33832589 + AT_rich Low_complexity Low_complexity 1 42 0 1520 156 67 11 chr17 51606094 51606364 -33832116 + AluJo SINE Alu 9 293 -19 1430 174 0 13 chr17 51606383 51606619 -33831861 + AluJo SINE Alu 1 233 -79 2031 90 34 4 chr17 51606619 51606887 -33831593 - AluSx SINE Alu -36 276 1 343 182 0 61 chr17 51607920 51608052 -33830428 + GA-rich Low_complexity Low_complexity 4 127 0 2168 106 7 0 chr17 51608105 51608397 -33830083 - AluSx SINE Alu -18 294 1 2071 128 0 0 chr17 51608429 51608718 -33829762 + AluSx SINE Alu 3 291 -21 249 308 138 46 chr17 51608718 51608839 -33829641 + MIR3 SINE MIR 24 159 -49 2024 119 39 0 chr17 51609766 51610052 -33828428 + AluSx SINE Alu 1 297 -15 30 69 0 0 chr17 51610057 51610115 -33828365 + AT_rich Low_complexity Low_complexity 1 58 0 49 18 0 0 chr17 51610180 51610236 -33828244 + AT_rich Low_complexity Low_complexity 1 56 0 1702 143 3 64 chr17 51610236 51610394 -33828086 + AluJb SINE Alu 5 136 -176 2206 105 0 0 chr17 51610394 51610689 -33827791 + AluSg SINE Alu 1 295 -15 1702 143 3 64 chr17 51610689 51610844 -33827636 + AluJb SINE Alu 136 299 -13 419 63 16 0 chr17 51610845 51610908 -33827572 + (TA)n Simple_repeat Simple_repeat 1 64 0 1980 124 23 23 chr17 51611106 51611412 -33827068 - AluJb SINE Alu -6 306 1 2411 73 0 10 chr17 51611422 51611725 -33826755 - AluY SINE Alu -11 300 1 25 31 0 0 chr17 51612016 51612048 -33826432 + AT_rich Low_complexity Low_complexity 1 32 0 1949 130 0 18 chr17 51612057 51612342 -33826138 + AluSx SINE Alu 3 282 -30 22 35 0 0 chr17 51613993 51614022 -33824458 + AT_rich Low_complexity Low_complexity 1 29 0 32 43 0 0 chr17 51614882 51614928 -33823552 + AT_rich Low_complexity Low_complexity 1 46 0 1139 239 24 0 chr17 51615251 51615506 -33822974 - MIR SINE MIR 0 262 2 1493 222 145 32 chr17 51615685 51616217 -33822263 + L1ME3A LINE L1 5411 6002 -168 1985 78 7 68 chr17 51616472 51616795 -33821685 + AluSg SINE Alu 11 310 0 564 262 140 63 chr17 51616795 51617081 -33821399 + L2 LINE L2 2539 2846 -468 1754 150 76 87 chr17 51617105 51617212 -33821268 + MLT1B LTR MaLR 1 108 -282 2161 118 7 10 chr17 51617212 51617517 -33820963 + AluSx SINE Alu 1 304 -8 1754 150 76 87 chr17 51617517 51617802 -33820678 + MLT1B LTR MaLR 108 389 -1 2426 82 0 3 chr17 51617828 51618131 -33820349 - AluSc SINE Alu -3 306 5 2217 108 10 3 chr17 51618320 51618627 -33819853 + AluSq SINE Alu 1 309 -4 22 70 0 0 chr17 51618977 51619020 -33819460 + AT_rich Low_complexity Low_complexity 1 43 0 3297 141 18 28 chr17 51619096 51619580 -33818900 - L1MC1 LINE L1 -1 6332 5853 2163 120 3 0 chr17 51619580 51619879 -33818601 - AluSx SINE Alu -12 300 1 3297 141 18 28 chr17 51619879 51619962 -33818518 - L1MC1 LINE L1 -480 5853 5771 2307 96 0 10 chr17 51620116 51620418 -33818062 + AluSx SINE Alu 1 299 -13 2260 108 7 0 chr17 51620591 51620888 -33817592 + AluSx SINE Alu 1 299 -13 207 0 0 0 chr17 51620888 51620911 -33817569 + (TAAG)n Simple_repeat Simple_repeat 1 23 0 27 49 0 0 chr17 51620911 51620952 -33817528 + AT_rich Low_complexity Low_complexity 1 41 0 1875 161 46 22 chr17 51621477 51621829 -33816651 + L1MB7 LINE L1 5780 6143 -41 2300 100 0 3 chr17 51621829 51622119 -33816361 + AluSq SINE Alu 1 289 -24 1875 161 46 22 chr17 51622119 51622132 -33816348 + L1MB7 LINE L1 6143 6154 -30 871 126 0 35 chr17 51622179 51622322 -33816158 - FLAM_C SINE Alu -5 138 1 770 234 54 15 chr17 51622628 51622833 -33815647 + MLT1J2 LTR MaLR 1 213 -237 235 267 67 22 chr17 51622927 51623017 -33815463 + MLT1J1 LTR MaLR 346 439 -7 1863 163 0 17 chr17 51623099 51623400 -33815080 - AluJo SINE Alu -16 296 1 1059 106 0 0 chr17 51623430 51623571 -33814909 + AluSg/x SINE Alu 169 309 -3 851 52 0 0 chr17 51623576 51623673 -33814807 + AluSc SINE Alu 13 109 -200 1653 92 5 5 chr17 51623673 51623891 -33814589 + AluSc SINE Alu 73 290 -19 200 265 0 20 chr17 51624352 51624401 -33814079 + GA-rich Low_complexity Low_complexity 4 51 0 368 332 97 39 chr17 51625416 51625799 -33812681 - L3b LINE CR1 -27 1556 1152 22 0 0 0 chr17 51626198 51626220 -33812260 + AT_rich Low_complexity Low_complexity 1 22 0 37 52 0 0 chr17 51626571 51626629 -33811851 + AT_rich Low_complexity Low_complexity 1 58 0 282 205 48 48 chr17 51626969 51627052 -33811428 + FLAM_A SINE Alu 3 85 -48 262 217 237 0 chr17 51627892 51628044 -33810436 + L1ME4a LINE L1 5802 5989 -132 2280 104 0 0 chr17 51629063 51629361 -33809119 - AluSx SINE Alu -14 298 1 2247 110 0 3 chr17 51629390 51629689 -33808791 + AluSx SINE Alu 1 298 -14 1475 197 21 24 chr17 51629899 51630033 -33808447 + AluJb SINE Alu 1 134 -178 2275 61 3 14 chr17 51630033 51630327 -33808153 + AluY SINE Alu 1 291 -20 1475 197 21 24 chr17 51630327 51630482 -33807998 + AluJb SINE Alu 134 289 -23 22 0 0 0 chr17 51630494 51630516 -33807964 + AT_rich Low_complexity Low_complexity 1 22 0 2085 91 24 28 chr17 51630810 51630944 -33807536 + AluSg SINE Alu 1 134 -176 2490 42 0 0 chr17 51630944 51631264 -33807216 + AluY SINE Alu 1 320 0 2085 91 24 28 chr17 51631264 51631413 -33807067 + AluSg SINE Alu 134 286 -24 2364 107 3 0 chr17 51631904 51632214 -33806266 + AluSx SINE Alu 1 311 -1 1877 174 3 0 chr17 51632532 51632830 -33805650 + AluJo SINE Alu 1 299 -13 2031 121 0 0 chr17 51632833 51633114 -33805366 + AluY SINE Alu 31 311 0 1660 166 21 3 chr17 51633129 51633412 -33805068 + AluJb SINE Alu 1 288 -24 2361 108 0 0 chr17 51633443 51633750 -33804730 + AluSx SINE Alu 1 307 -5 506 174 272 0 chr17 51633869 51633961 -33804519 + FLAM_C SINE Alu 2 118 -25 831 106 0 0 chr17 51633975 51634126 -33804354 + (CTAG)n Simple_repeat Simple_repeat 1 151 0 2096 98 18 0 chr17 51634126 51634411 -33804069 - AluSp SINE Alu -23 290 1 1990 150 0 10 chr17 51634643 51634943 -33803537 - AluJb SINE Alu -15 297 1 830 183 0 15 chr17 51634946 51635083 -33803397 - FLAM_C SINE Alu -7 136 2 22 35 0 0 chr17 51635700 51635729 -33802751 + AT_rich Low_complexity Low_complexity 1 29 0 2026 137 0 33 chr17 51636221 51636528 -33801952 - AluSx SINE Alu -15 297 1 2811 233 130 44 chr17 51637149 51637590 -33800890 + L2 LINE L2 1860 2262 -1051 2289 106 0 19 chr17 51637590 51637902 -33800578 + AluSg SINE Alu 1 306 -4 2811 233 130 44 chr17 51637902 51638242 -33800238 + L2 LINE L2 2262 2571 -742 1521 117 0 0 chr17 51638242 51638448 -33800032 + AluSg/x SINE Alu 83 288 -22 2354 93 7 0 chr17 51638451 51638752 -33799728 + AluSp SINE Alu 1 303 -10 2811 233 130 44 chr17 51638752 51639084 -33799396 + L2 LINE L2 2572 2874 -439 2333 93 13 16 chr17 51639084 51639394 -33799086 + AluSx SINE Alu 1 309 -3 2811 233 130 44 chr17 51639394 51639625 -33798855 + L2 LINE L2 2874 3313 0 264 161 107 36 chr17 51639874 51639930 -33798550 + MLT1K LTR MaLR 98 157 -431 492 227 109 68 chr17 51639992 51640212 -33798268 + MLT1K LTR MaLR 324 552 -36 2172 125 0 6 chr17 51640214 51640526 -33797954 - AluSx SINE Alu -2 310 1 360 0 0 0 chr17 51640533 51640573 -33797907 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 600 187 89 8 chr17 51640580 51640703 -33797777 - FRAM SINE Alu -37 139 7 307 160 0 0 chr17 51641069 51641119 -33797361 - L2 LINE L2 0 3272 3223 1956 109 3 67 chr17 51641385 51641698 -33796782 - AluSx SINE Alu -19 293 1 1967 147 10 0 chr17 51641830 51642137 -33796343 - AluSx SINE Alu -2 310 1 2104 116 6 47 chr17 51642949 51643269 -33795211 - AluSx SINE Alu -5 307 1 1707 167 0 40 chr17 51643348 51643648 -33794832 + AluSx SINE Alu 1 288 -24 1984 128 31 0 chr17 51643653 51643941 -33794539 + AluSg SINE Alu 14 310 0 21 0 0 0 chr17 51644704 51644725 -33793755 + AT_rich Low_complexity Low_complexity 1 21 0 1885 147 0 33 chr17 51644735 51645034 -33793446 - AluJb SINE Alu -23 289 1 2275 95 0 7 chr17 51645504 51645798 -33792682 + AluY SINE Alu 1 292 -19 1950 122 3 10 chr17 51645806 51646122 -33792358 + AluSc SINE Alu 5 309 0 2191 118 0 0 chr17 51646131 51646447 -33792033 + AluSq SINE Alu 1 313 0 674 77 11 0 chr17 51646450 51646541 -33791939 + L1PB2 LINE L1 6057 6148 -3 548 110 25 8 chr17 51646542 51646660 -33791820 + (TA)n Simple_repeat Simple_repeat 1 120 0 2215 95 3 7 chr17 51646671 51646966 -33791514 - AluSx SINE Alu -18 294 1 218 368 0 0 chr17 51647042 51647110 -33791370 - L2 LINE L2 -335 2978 2911 2007 102 55 4 chr17 51647229 51647504 -33790976 + AluSg SINE Alu 1 289 -21 1642 154 6 50 chr17 51647967 51648286 -33790194 + AluJb SINE Alu 1 305 -7 180 0 0 0 chr17 51648482 51648502 -33789978 + (TTG)n Simple_repeat Simple_repeat 2 21 0 180 0 0 0 chr17 51648974 51648994 -33789486 + (A)n Simple_repeat Simple_repeat 1 20 0 937 245 88 62 chr17 51649158 51649621 -33788859 + L1MC5 LINE L1 7315 7799 -162 1537 159 0 83 chr17 51649621 51649935 -33788545 + AluJo SINE Alu 1 288 -24 937 245 88 62 chr17 51649935 51650072 -33788408 + L1MC5 LINE L1 7799 7931 -30 914 173 0 0 chr17 51650082 51650215 -33788265 + FLAM_C SINE Alu 1 133 0 368 243 33 97 chr17 51650289 51650410 -33788070 + L1M4 LINE L1 5664 5778 -400 2387 77 23 0 chr17 51650410 51650710 -33787770 + AluY SINE Alu 1 307 -4 368 243 33 97 chr17 51650710 51650749 -33787731 + L1M4 LINE L1 5778 5818 -360 854 287 109 65 chr17 51650755 51651496 -33786984 + HAL1 LINE L1 310 1083 -1424 674 201 25 31 chr17 51651502 51651661 -33786819 + L1MC5 LINE L1 7039 7196 -765 405 204 0 11 chr17 51651691 51651779 -33786701 - L1MC5 LINE L1 -381 7580 7494 2407 71 3 7 chr17 51652003 51652312 -33786168 + AluY SINE Alu 1 308 -3 1557 124 26 130 chr17 51652317 51652656 -33785824 + AluYb8 SINE Alu 1 304 -14 493 95 0 86 chr17 51652660 51653061 -33785419 + (TA)n Simple_repeat Simple_repeat 1 366 0 2056 134 0 13 chr17 51653063 51653368 -33785112 + AluSx SINE Alu 12 312 0 323 288 181 44 chr17 51653385 51653777 -33784703 + L1ME1 LINE L1 5455 5854 -312 2889 180 85 31 chr17 51653789 51654344 -33784136 + MER21B LTR ERV1 1 585 -278 701 194 8 16 chr17 51654389 51654518 -33783962 + FLAM_A SINE Alu 1 128 -5 228 182 0 0 chr17 51654533 51654577 -33783903 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 1183 133 58 66 chr17 51654578 51654782 -33783698 + MER21B LTR ERV1 575 778 -85 1888 136 0 82 chr17 51654782 51655113 -33783367 - AluJb SINE Alu -8 304 1 1183 133 58 66 chr17 51655113 51655149 -33783331 + MER21B LTR ERV1 778 813 -50 550 133 20 31 chr17 51655165 51655263 -33783217 - U13 snRNA snRNA -2 102 6 2068 99 7 3 chr17 51655476 51655781 -33782699 - AluSq SINE Alu 0 306 1 2230 102 0 3 chr17 51655809 51656112 -33782368 + AluSc SINE Alu 1 302 -7 2425 90 3 0 chr17 51656141 51656451 -33782029 + AluSp SINE Alu 1 311 -2 566 172 0 0 chr17 51656480 51656567 -33781913 - Tigger4(Zombi) DNA MER2_type -2644 87 1 270 0 0 0 chr17 51656749 51656779 -33781701 + (A)n Simple_repeat Simple_repeat 1 30 0 2010 149 0 0 chr17 51656807 51657108 -33781372 + AluSx SINE Alu 1 301 -11 1538 152 19 95 chr17 51657312 51657627 -33780853 + AluJb SINE Alu 1 291 -21 2151 109 7 3 chr17 51657628 51657921 -33780559 + AluSp SINE Alu 1 294 -19 2314 108 0 3 chr17 51658055 51658361 -33780119 + AluSc SINE Alu 1 305 -4 2208 99 0 3 chr17 51658632 51658914 -33779566 - AluSq SINE Alu -32 281 1 1776 151 3 70 chr17 51659090 51659421 -33779059 + AluSx SINE Alu 1 309 -3 2201 112 0 7 chr17 51659497 51659792 -33778688 - AluSx SINE Alu -18 294 2 538 158 198 0 chr17 51659814 51659915 -33778565 - FLAM_A SINE Alu -12 121 1 547 205 0 0 chr17 51660634 51660717 -33777763 + AluJ/FLAM SINE Alu 2 84 -228 209 261 235 8 chr17 51660719 51660838 -33777642 - L2 LINE L2 -561 2753 2608 * 248 283 212 0 chr17 51660837 51660936 -33777544 - L2 LINE L2 0 3313 3194 * 371 331 216 3 chr17 51660932 51661237 -33777243 - L2 LINE L2 -702 2612 2243 * 491 224 37 19 chr17 51661235 51661342 -33777138 + L2 LINE L2 3192 3300 -13 2036 142 3 0 chr17 51661344 51661639 -33776841 + AluSp SINE Alu 1 296 -17 2772 14 0 0 chr17 51661641 51661936 -33776544 + AluY SINE Alu 1 295 -16 1247 73 0 0 chr17 51661936 51662122 -33776358 + AluY SINE Alu 133 318 0 239 318 87 8 chr17 51662249 51662375 -33776105 - L2 LINE L2 -1246 2068 1933 2461 56 13 3 chr17 51662578 51662880 -33775600 + AluY SINE Alu 1 305 -6 1772 149 53 20 chr17 51662972 51663092 -33775388 + AluJo SINE Alu 1 116 -196 468 0 0 0 chr17 51663092 51663144 -33775336 + (CA)n Simple_repeat Simple_repeat 2 53 0 1772 149 53 20 chr17 51663144 51663324 -33775156 + AluJo SINE Alu 116 311 -1 429 203 55 93 chr17 51663354 51663505 -33774975 + L2 LINE L2 3127 3282 -31 2152 134 0 16 chr17 51663505 51663811 -33774669 + AluSx SINE Alu 2 302 -10 2325 103 7 3 chr17 51663813 51664115 -33774365 + AluSg SINE Alu 3 305 -5 429 203 55 93 chr17 51664115 51664142 -33774338 + L2 LINE L2 3283 3301 -12 781 138 46 8 chr17 51664257 51664387 -33774093 + AluJo SINE Alu 2 136 -176 2330 89 13 13 chr17 51664446 51664748 -33773732 + AluSg SINE Alu 1 302 -8 916 184 0 0 chr17 51664768 51664915 -33773565 + FRAM SINE Alu 11 157 -19 1960 159 3 0 chr17 51665099 51665394 -33773086 + AluSq SINE Alu 6 301 -12 1751 166 0 54 chr17 51665473 51665786 -33772694 - AluJo SINE Alu -16 296 1 869 112 0 8 chr17 51665808 51665933 -33772547 - AluSp/q SINE Alu -2 311 188 1730 92 5 0 chr17 51665933 51666151 -33772329 - AluSp SINE Alu -94 219 1 2493 97 0 0 chr17 51666215 51666524 -33771956 - AluSg SINE Alu -1 309 1 353 304 31 39 chr17 51666652 51666694 -33771786 + L1MC4 LINE L1 7607 7648 -391 194 0 39 0 chr17 51666694 51666720 -33771760 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 1721 193 0 0 chr17 51666721 51667001 -33771479 - AluJb SINE Alu -32 280 1 353 304 31 39 chr17 51667001 51667148 -33771332 + L1MC4 LINE L1 7647 7877 -162 1913 146 34 0 chr17 51667398 51667693 -33770787 + AluJb SINE Alu 1 305 -7 2377 70 13 0 chr17 51667828 51668126 -33770354 + AluY SINE Alu 1 302 -9 2082 135 3 3 chr17 51668583 51668886 -33769594 - AluSx SINE Alu -3 309 7 845 173 0 0 chr17 51669241 51669374 -33769106 + FLAM_C SINE Alu 1 133 0 2291 97 10 7 chr17 51669380 51669688 -33768792 + AluSc SINE Alu 1 309 0 1294 129 49 105 chr17 51669688 51669974 -33768506 + AluJb SINE Alu 36 305 -7 2355 109 3 0 chr17 51670062 51670373 -33768107 + AluSp SINE Alu 2 313 0 2215 132 0 0 chr17 51670387 51670697 -33767783 + AluSx SINE Alu 1 310 -2 1724 188 7 0 chr17 51670704 51670986 -33767494 + AluJb SINE Alu 1 284 -28 2245 103 0 3 chr17 51671033 51671325 -33767155 + AluSx SINE Alu 1 291 -21 2100 146 0 7 chr17 51671339 51671648 -33766832 + AluSg SINE Alu 1 307 -3 2290 122 0 0 chr17 51671659 51671955 -33766525 + AluSx SINE Alu 1 296 -16 1207 157 9 37 chr17 51672179 51672395 -33766085 - AluJo SINE Alu -16 296 87 2270 110 10 0 chr17 51672538 51672847 -33765633 + AluSp SINE Alu 1 312 -1 2198 142 0 0 chr17 51673025 51673335 -33765145 - AluSx SINE Alu -2 310 1 1688 168 25 18 chr17 51673473 51673758 -33764722 + AluJo SINE Alu 5 291 -21 234 310 215 5 chr17 51673815 51674015 -33764465 - L2 LINE L2 -243 3070 2829 2392 80 10 7 chr17 51674420 51674722 -33763758 + AluSg1 SINE Alu 1 303 -6 2118 94 36 36 chr17 51674841 51675150 -33763330 + AluSx SINE Alu 1 309 -3 1701 132 54 34 chr17 51675747 51676042 -33762438 + AluSx SINE Alu 1 301 -11 197 254 93 110 chr17 51676282 51676400 -33762080 - L2 LINE L2 -2 3270 3155 25 31 0 0 chr17 51677272 51677304 -33761176 + GC_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr17 51677659 51677687 -33760793 + GC_rich Low_complexity Low_complexity 1 28 0 225 180 0 0 chr17 51677726 51677776 -33760704 + (CTGGGG)n Simple_repeat Simple_repeat 2 51 0 26 0 0 0 chr17 51677855 51677881 -33760599 + GC_rich Low_complexity Low_complexity 1 26 0 43 64 0 0 chr17 51677890 51677968 -33760512 + GC_rich Low_complexity Low_complexity 1 78 0 428 245 49 49 chr17 51678191 51678334 -33760146 - MIR SINE MIR -69 193 51 868 161 39 17 chr17 51678483 51678663 -33759817 + L1MB8 LINE L1 5995 6178 0 2380 95 3 3 chr17 51679678 51679983 -33758497 + AluSg SINE Alu 1 305 -5 368 184 50 0 chr17 51680121 51680213 -33758267 + L1MB8 LINE L1 5727 5822 -352 692 125 108 8 chr17 51680235 51680355 -33758125 + FLAM_C SINE Alu 6 137 -6 2379 88 3 22 chr17 51680363 51680682 -33757798 + AluSp SINE Alu 1 313 0 2367 101 0 3 chr17 51680720 51681016 -33757464 - AluSq SINE Alu -16 297 3 1250 134 133 57 chr17 51681016 51681329 -33757151 + L1MB8 LINE L1 5843 6178 0 2374 90 7 0 chr17 51681357 51681657 -33756823 + AluSx SINE Alu 5 306 -6 190 302 19 0 chr17 51681852 51681905 -33756575 + MIR3 SINE MIR 112 165 -43 1236 198 7 29 chr17 51681906 51682184 -33756296 + AluJo SINE Alu 29 300 -12 513 120 40 0 chr17 51682196 51682296 -33756184 + GA-rich Low_complexity Low_complexity 1 104 0 2192 134 0 0 chr17 51682310 51682615 -33755865 - AluSq SINE Alu -8 305 1 2371 97 0 10 chr17 51682631 51682931 -33755549 - AluSc SINE Alu -12 297 1 2211 101 0 11 chr17 51683652 51683939 -33754541 - AluSx SINE Alu -20 292 9 2305 117 7 0 chr17 51683945 51684253 -33754227 - AluSx SINE Alu -2 310 1 1682 162 44 14 chr17 51684259 51684555 -33753925 - AluJb SINE Alu -7 305 1 3166 141 2 8 chr17 51684918 51685407 -33753073 - MER66B LTR ERV1 0 486 1 2418 107 0 0 chr17 51685477 51685786 -33752694 + AluSc SINE Alu 1 309 0 2341 101 10 0 chr17 51685798 51686105 -33752375 + AluSg SINE Alu 1 310 0 2110 138 0 3 chr17 51686118 51686414 -33752066 + AluSx SINE Alu 1 295 -17 2229 103 0 23 chr17 51687008 51687309 -33751171 - AluSc SINE Alu -15 294 1 892 210 6 6 chr17 51687352 51687519 -33750961 + FRAM SINE Alu 1 159 -17 2075 112 0 51 chr17 51687657 51687969 -33750511 - AluSg SINE Alu -14 296 1 261 367 40 11 chr17 51688028 51688205 -33750275 - L2 LINE L2 -808 2506 2325 1397 146 0 171 chr17 51688343 51688706 -33749774 - AluJo SINE Alu -11 301 1 2161 110 3 3 chr17 51688888 51689178 -33749302 + AluSx SINE Alu 1 290 -22 235 213 21 0 chr17 51689178 51689225 -33749255 + GA-rich Low_complexity Low_complexity 1 48 0 248 282 13 51 chr17 51689225 51689303 -33749177 - MIR3 SINE MIR -30 178 104 2292 125 0 0 chr17 51689630 51689942 -33748538 + AluSx SINE Alu 1 312 0 2234 111 7 0 chr17 51690762 51691059 -33747421 - AluSq SINE Alu -14 299 1 2238 102 20 7 chr17 51691061 51691356 -33747124 - AluSx SINE Alu -13 299 1 872 175 96 93 chr17 51691415 51691506 -33746974 + MIR SINE MIR 16 105 -157 2501 70 3 3 chr17 51691506 51691808 -33746672 - AluY SINE Alu -9 302 1 872 175 96 93 chr17 51691808 51691956 -33746524 + MIR SINE MIR 105 250 -12 1509 113 50 103 chr17 51691956 51692137 -33746343 + THE1B LTR MaLR 1 190 -174 2391 92 0 0 chr17 51692137 51692431 -33746049 + AluSq SINE Alu 2 295 -18 1836 117 51 15 chr17 51692441 51692739 -33745741 + AluSx SINE Alu 1 308 0 1509 113 50 103 chr17 51692739 51692845 -33745635 + THE1B LTR MaLR 199 284 -80 1276 143 46 32 chr17 51692900 51693117 -33745363 - AluJo SINE Alu -92 220 1 397 274 156 52 chr17 51693257 51693464 -33745016 + L3 LINE CR1 1133 1317 -260 2202 110 3 3 chr17 51693464 51693777 -33744703 + AluSx SINE Alu 1 312 0 2396 94 3 3 chr17 51693780 51694087 -33744393 + AluSg SINE Alu 2 308 -2 397 274 156 52 chr17 51694087 51694240 -33744240 + L3 LINE CR1 1318 1535 -42 2290 113 3 0 chr17 51694243 51694554 -33743926 - AluSq SINE Alu -1 312 1 2337 103 3 0 chr17 51695050 51695352 -33743128 + AluSp SINE Alu 1 303 -10 1327 86 124 24 chr17 51695364 51695446 -33743034 + MER30 DNA MER1_type 1 73 -157 1881 157 13 17 chr17 51695446 51695746 -33742734 + AluSx SINE Alu 1 299 -13 1327 86 124 24 chr17 51695746 51695872 -33742608 + MER30 DNA MER1_type 73 230 0 1184 159 0 82 chr17 51696034 51696267 -33742213 + AluJb SINE Alu 86 299 -13 810 176 0 0 chr17 51696420 51696545 -33741935 + FLAM_C SINE Alu 1 125 -18 2182 119 0 0 chr17 51696560 51696855 -33741625 + AluSq SINE Alu 1 295 -18 2074 144 3 3 chr17 51697225 51697531 -33740949 + AluSx SINE Alu 1 306 -6 2086 89 0 109 chr17 51697535 51697883 -33740597 + AluSx SINE Alu 3 312 0 2089 115 0 17 chr17 51697903 51698099 -33740381 - AluSx SINE Alu 0 330 132 2158 122 3 3 chr17 51698099 51698439 -33740041 - AluSc SINE Alu 0 309 1 2314 113 0 0 chr17 51698441 51698743 -33739737 - AluSg SINE Alu -8 302 1 2089 115 0 17 chr17 51698743 51698878 -33739602 - AluSx SINE Alu -199 131 1 297 285 62 39 chr17 51698947 51699077 -33739403 + MLT1I LTR MaLR 70 202 -207 1978 152 0 10 chr17 51699320 51699629 -33738851 + AluSx SINE Alu 1 306 -6 2376 76 13 0 chr17 51700255 51700559 -33737921 + AluSp SINE Alu 1 308 -5 1576 186 37 24 chr17 51700570 51700865 -33737615 + AluJo SINE Alu 1 299 -13 695 203 8 8 chr17 51700871 51701004 -33737476 + MIR SINE MIR 31 163 -99 1611 80 0 5 chr17 51701005 51701204 -33737276 + AluY SINE Alu 16 213 -98 869 127 15 22 chr17 51702023 51702157 -33736323 + FLAM_C SINE Alu 1 133 0 2048 124 0 11 chr17 51702303 51702436 -33736044 + AluSg SINE Alu 1 134 -175 2641 60 0 10 chr17 51702436 51702750 -33735730 + AluY SINE Alu 1 311 0 2048 124 0 11 chr17 51702750 51702928 -33735552 + AluSg SINE Alu 134 309 0 2339 107 7 0 chr17 51702933 51703241 -33735239 + AluSx SINE Alu 1 310 -2 846 162 0 34 chr17 51703241 51703383 -33735097 + AluJb SINE Alu 137 273 -39 333 0 0 0 chr17 51703400 51703437 -33735043 + (CA)n Simple_repeat Simple_repeat 2 38 0 612 289 46 10 chr17 51703437 51703634 -33734846 + MIR SINE MIR 58 261 -1 675 267 29 81 chr17 51703944 51704217 -33734263 - MIR SINE MIR -3 259 1 2207 123 7 0 chr17 51704236 51704546 -33733934 - AluSx SINE Alu 0 312 1 249 327 10 20 chr17 51704555 51704656 -33733824 + L2 LINE L2 2610 2709 -605 848 139 0 8 chr17 51704710 51704839 -33733641 - AluJb SINE Alu -179 133 6 1065 110 0 0 chr17 51704894 51705030 -33733450 - AluSg1 SINE Alu -173 136 1 2246 87 7 10 chr17 51705250 51705550 -33732930 - AluY SINE Alu -12 299 1 1493 176 3 59 chr17 51705561 51705756 -33732724 - AluJo SINE Alu -23 289 85 3446 114 67 76 chr17 51705756 51705896 -33732584 - MER41B LTR ERV1 0 635 495 2308 105 3 0 chr17 51705896 51706200 -33732280 + AluSc SINE Alu 1 305 -4 3446 114 67 76 chr17 51706200 51706565 -33731915 - MER41B LTR ERV1 -140 495 135 2302 105 10 0 chr17 51706565 51706859 -33731621 - AluSx SINE Alu -15 297 1 3446 114 67 76 chr17 51706859 51706993 -33731487 - MER41B LTR ERV1 -500 135 1 1493 176 3 59 chr17 51706993 51707103 -33731377 - AluJo SINE Alu -227 85 1 3683 144 31 51 chr17 51707107 51707549 -33730931 - L1MD2 LINE L1 -362 5997 5587 2742 29 3 0 chr17 51707549 51707858 -33730622 + AluY SINE Alu 1 310 -1 3683 144 31 51 chr17 51707858 51708285 -33730195 - L1MD2 LINE L1 -772 5587 5153 2248 82 4 0 chr17 51708292 51708602 -33729878 + AluSx SINE Alu 2 312 0 2080 125 0 10 chr17 51708602 51708739 -33729741 + AluSx SINE Alu 1 138 -174 2505 81 0 0 chr17 51708739 51709049 -33729431 + AluSg SINE Alu 1 310 0 2080 125 0 10 chr17 51709049 51709215 -33729265 + AluSx SINE Alu 138 301 -11 2297 99 0 0 chr17 51709237 51709549 -33728931 - AluSx SINE Alu 0 312 1 709 246 49 23 chr17 51709549 51709813 -33728667 - L1MD2 LINE L1 -979 5167 4897 410 258 112 37 chr17 51709980 51710240 -33728240 + L2 LINE L2 2963 3303 -10 301 220 176 0 chr17 51710873 51710964 -33727516 + L2 LINE L2 3164 3270 -2 189 175 100 25 chr17 51710976 51711016 -33727464 - L2 LINE L2 -2 3270 3228 228 196 0 71 chr17 51711451 51711507 -33726973 + MIR3 SINE MIR 130 181 -27 270 185 31 31 chr17 51711666 51711731 -33726749 + MIR3 SINE MIR 112 176 -32 199 276 35 69 chr17 51711857 51711944 -33726536 + L2 LINE L2 3186 3269 -3 2074 123 7 17 chr17 51711946 51712248 -33726232 + AluSx SINE Alu 1 299 -13 810 153 0 0 chr17 51712256 51712380 -33726100 + FLAM_C SINE Alu 1 124 -9 1494 129 0 0 chr17 51713399 51713600 -33724880 + AluSq SINE Alu 6 206 -107 2433 82 7 0 chr17 51713600 51713903 -33724577 + AluSq SINE Alu 1 305 -8 596 100 30 40 chr17 51713909 51714009 -33724471 + AluSg/x SINE Alu 197 295 -14 261 100 50 0 chr17 51714148 51714188 -33724292 + Alu SINE Alu 6 47 -253 198 103 0 0 chr17 51714197 51714226 -33724254 + (A)n Simple_repeat Simple_repeat 1 29 0 1667 155 83 14 chr17 51714281 51714559 -33723921 - MSTD LTR MaLR -99 297 1 290 337 128 10 chr17 51714585 51714781 -33723699 - MIR SINE MIR -14 248 30 2142 118 0 0 chr17 51714987 51715276 -33723204 + AluSx SINE Alu 1 289 -23 1118 149 17 0 chr17 51715279 51715453 -33723027 + AluJo/FRAM SINE Alu 132 308 -4 1345 137 0 73 chr17 51716161 51716308 -33722172 + AluJo SINE Alu 1 127 -185 1982 118 18 4 chr17 51716308 51716610 -33721870 + AluSx SINE Alu 1 306 0 1345 137 0 73 chr17 51716610 51716695 -33721785 + AluJo SINE Alu 127 217 -95 431 355 43 27 chr17 51717260 51717596 -33720884 - L2 LINE L2 -243 3070 2714 2469 69 0 3 chr17 51717596 51717899 -33720581 - AluY SINE Alu -9 302 1 431 355 43 27 chr17 51717899 51717984 -33720496 - L2 LINE L2 -599 2714 2632 231 250 16 16 chr17 51719220 51719284 -33719196 - L2 LINE L2 -8 3264 3201 522 164 227 18 chr17 51719308 51719418 -33719062 + FLAM_A SINE Alu 1 133 0 1350 196 35 14 chr17 51719423 51719708 -33718772 + AluJo SINE Alu 1 291 -21 1840 141 21 7 chr17 51719944 51720234 -33718246 + AluJo SINE Alu 1 294 -18 467 245 102 7 chr17 51720339 51720486 -33717994 - MLT1J LTR MaLR -239 272 112 2035 124 3 13 chr17 51720486 51720784 -33717696 - AluJb SINE Alu -13 299 5 2391 99 0 3 chr17 51720794 51721107 -33717373 - AluSx SINE Alu 0 312 1 2517 72 0 3 chr17 51721260 51721565 -33716915 - AluY SINE Alu -7 304 1 2366 89 0 7 chr17 51721568 51721870 -33716610 - AluSg SINE Alu -10 300 1 261 0 0 0 chr17 51723105 51723134 -33715346 + (TG)n Simple_repeat Simple_repeat 2 30 0 1559 166 68 10 chr17 51724695 51724805 -33713675 + AluJo SINE Alu 1 103 -209 207 0 0 0 chr17 51724805 51724828 -33713652 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1559 166 68 10 chr17 51724828 51725012 -33713468 + AluJo SINE Alu 103 312 0 231 140 0 70 chr17 51725063 51725120 -33713360 - LTR66 LTR ERVL -166 444 392 1280 99 0 0 chr17 51725511 51725673 -33712807 + AluSg/x SINE Alu 134 295 -17 1024 97 10 4 chr17 51725753 51725959 -33712521 + AluSx SINE Alu 2 289 -21 2242 87 20 17 chr17 51726150 51726449 -33712031 + AluSg SINE Alu 1 300 -10 2176 108 20 0 chr17 51727132 51727429 -33711051 - AluSx SINE Alu -9 303 1 2087 91 28 24 chr17 51727508 51727795 -33710685 + AluSq SINE Alu 14 301 -12 2367 68 4 0 chr17 51728846 51729126 -33709354 - AluSp SINE Alu -32 281 1 934 136 0 90 chr17 51729128 51729305 -33709175 - AluSg/x SINE Alu -15 295 135 2304 92 0 0 chr17 51729794 51730087 -33708393 - AluSg1 SINE Alu -16 293 1 2347 195 95 14 chr17 51730132 51730496 -33707984 + MER21B LTR ERV1 3 336 -527 619 200 32 16 chr17 51730496 51730621 -33707859 - FLAM_A SINE Alu -6 127 1 2347 195 95 14 chr17 51730621 51730884 -33707596 + MER21B LTR ERV1 336 746 -117 207 247 27 14 chr17 51731139 51731212 -33707268 - MER5A DNA MER1_type -97 92 19 414 264 169 0 chr17 51731239 51731440 -33707040 - MIR SINE MIR -24 238 4 2254 91 3 10 chr17 51731441 51731739 -33706741 - AluSg SINE Alu -14 296 1 22 0 0 0 chr17 51731739 51731761 -33706719 + AT_rich Low_complexity Low_complexity 1 22 0 2187 102 10 0 chr17 51731927 51732221 -33706259 + AluSq SINE Alu 1 297 -16 1552 176 50 4 chr17 51732286 51732564 -33705916 - AluSg SINE Alu -19 291 1 21 0 0 0 chr17 51732608 51732629 -33705851 + AT_rich Low_complexity Low_complexity 1 21 0 454 157 0 0 chr17 51732664 51732734 -33705746 + AluJ/FLAM SINE Alu 1 70 -242 2314 102 0 7 chr17 51732802 51733105 -33705375 + AluSg SINE Alu 1 301 -9 2409 92 0 10 chr17 51733106 51733412 -33705068 + AluSc SINE Alu 2 304 -5 198 0 0 0 chr17 51733412 51733434 -33705046 + (TA)n Simple_repeat Simple_repeat 2 23 0 2023 72 0 0 chr17 51733812 51734061 -33704419 + AluY SINE Alu 55 303 -8 23 0 0 0 chr17 51734930 51734953 -33703527 + AT_rich Low_complexity Low_complexity 1 23 0 477 0 0 0 chr17 51736474 51736527 -33701953 + (TA)n Simple_repeat Simple_repeat 2 54 0 2330 82 3 20 chr17 51738011 51738314 -33700166 - AluSc SINE Alu -11 298 1 24 32 0 0 chr17 51738369 51738400 -33700080 + AT_rich Low_complexity Low_complexity 1 31 0 1148 179 21 0 chr17 51738453 51738643 -33699837 + AluJo SINE Alu 86 279 -33 250 293 0 0 chr17 51738685 51738743 -33699737 + AluY SINE Alu 135 192 -109 349 246 0 0 chr17 51738848 51738913 -33699567 - AluJ/FLAM SINE Alu -236 66 2 2100 130 3 7 chr17 51739115 51739415 -33699065 - AluSx SINE Alu -13 299 1 1036 93 0 0 chr17 51739947 51740076 -33698404 - AluSg SINE Alu -181 129 1 2131 98 9 68 chr17 51740156 51740481 -33697999 - AluSx SINE Alu -6 306 1 23 33 0 0 chr17 51740662 51740692 -33697788 + AT_rich Low_complexity Low_complexity 1 30 0 2363 60 7 3 chr17 51743484 51743796 -33694684 + AluY SINE Alu 1 313 0 1434 147 104 29 chr17 51744130 51744409 -33694071 + AluJo SINE Alu 1 300 -12 2270 119 3 0 chr17 51744557 51744868 -33693612 + AluSx SINE Alu 1 312 0 2637 43 7 0 chr17 51745743 51746047 -33692433 - AluSp SINE Alu -7 306 1 22 35 0 0 chr17 51746128 51746157 -33692323 + AT_rich Low_complexity Low_complexity 1 29 0 566 227 0 0 chr17 51746180 51746290 -33692190 + MER46C DNA MER2_type 224 333 -5 614 103 154 43 chr17 51747279 51747396 -33691084 - FLAM_C SINE Alu -3 130 1 22 35 0 0 chr17 51747397 51747426 -33691054 + AT_rich Low_complexity Low_complexity 1 29 0 1937 166 3 13 chr17 51747426 51747740 -33690740 + AluJb SINE Alu 1 311 -1 189 0 0 0 chr17 51747740 51747761 -33690719 + (TA)n Simple_repeat Simple_repeat 1 21 0 1657 170 3 33 chr17 51747788 51748088 -33690392 + AluJb SINE Alu 1 291 -21 1491 92 36 0 chr17 51748246 51748442 -33690038 - AluSp SINE Alu -8 305 103 2198 111 0 3 chr17 51748573 51748870 -33689610 - AluSc SINE Alu -13 296 1 1885 145 0 10 chr17 51750613 51750910 -33687570 - AluJo SINE Alu -18 294 1 2034 141 10 0 chr17 51751277 51751582 -33686898 + AluSx SINE Alu 1 308 -4 1544 154 16 61 chr17 51751590 51751901 -33686579 + AluJo SINE Alu 1 297 -15 1990 138 0 14 chr17 51752910 51753201 -33685279 - AluJb SINE Alu -25 287 1 1957 106 4 0 chr17 51753215 51753469 -33685011 - AluSx SINE Alu -13 299 45 2049 129 10 3 chr17 51753599 51753894 -33684586 + AluSx SINE Alu 1 297 -15 698 23 11 0 chr17 51754019 51754107 -33684373 + (TA)n Simple_repeat Simple_repeat 2 90 0 1768 136 0 0 chr17 51754111 51754354 -33684126 - AluSx SINE Alu -32 280 38 1494 165 81 44 chr17 51754499 51754796 -33683684 - AluJo SINE Alu -4 308 1 370 200 0 13 chr17 51755664 51755739 -33682741 - AluJ/FLAM SINE Alu -228 74 1 1960 147 27 0 chr17 51755793 51756085 -33682395 - AluSx SINE Alu -12 300 1 1757 111 89 7 chr17 51756085 51756356 -33682124 - AluSq SINE Alu -10 303 11 1909 94 8 0 chr17 51756441 51756686 -33681794 - AluSg SINE Alu -20 290 44 2230 118 0 3 chr17 51756806 51757112 -33681368 - AluY SINE Alu -4 307 3 240 237 17 0 chr17 51757209 51757268 -33681212 - MER5B DNA MER1_type -2 176 117 1525 186 36 27 chr17 51757270 51757571 -33680909 + AluJo SINE Alu 1 304 -8 2108 138 0 0 chr17 51757572 51757868 -33680612 + AluJb SINE Alu 2 297 -15 1294 178 142 18 chr17 51757869 51758144 -33680336 + AluJo SINE Alu 2 310 -2 1886 110 82 18 chr17 51760408 51760689 -33677791 - AluSx SINE Alu -13 299 1 917 181 16 32 chr17 51760986 51761174 -33677306 - MER5A DNA MER1_type -1 188 4 1050 135 0 0 chr17 51761246 51761394 -33677086 - AluSg/x SINE Alu -9 301 154 345 177 26 0 chr17 51761394 51761507 -33676973 + (TA)n Simple_repeat Simple_repeat 2 117 0 2187 104 7 0 chr17 51761514 51761793 -33676687 - AluSx SINE Alu -31 281 1 25 0 0 0 chr17 51762795 51762820 -33675660 + AT_rich Low_complexity Low_complexity 1 25 0 744 149 0 37 chr17 51763265 51763399 -33675081 - FLAM_C SINE Alu -3 130 2 1164 196 67 10 chr17 51763468 51763760 -33674720 + MER58B DNA MER1_type 33 341 0 21 0 0 0 chr17 51765819 51765840 -33672640 + AT_rich Low_complexity Low_complexity 1 21 0 2054 104 39 0 chr17 51767004 51767283 -33671197 - AluSx SINE Alu -22 290 1 2198 120 0 0 chr17 51767466 51767793 -33670687 + AluSx SINE Alu 1 327 0 1990 136 27 0 chr17 51767860 51768155 -33670325 + AluSx SINE Alu 6 308 -4 1713 164 10 51 chr17 51768203 51768514 -33669966 + AluJb SINE Alu 1 298 -14 2179 110 0 0 chr17 51769070 51769381 -33669099 + AluSg SINE Alu 1 311 0 1784 103 122 11 chr17 51769757 51770020 -33668460 - AluSq SINE Alu -21 292 1 1947 155 24 0 chr17 51770033 51770324 -33668156 - AluJb SINE Alu -14 298 1 235 253 27 40 chr17 51770628 51770703 -33667777 + MIR3 SINE MIR 126 199 -9 374 239 0 9 chr17 51771024 51771133 -33667347 + (TA)n Simple_repeat Simple_repeat 1 108 0 839 171 0 0 chr17 51771136 51771259 -33667221 - FLAM_C SINE Alu -20 123 1 2429 82 3 0 chr17 51772920 51773224 -33665256 - AluSq SINE Alu -8 305 1 21 57 0 0 chr17 51773424 51773459 -33665021 + AT_rich Low_complexity Low_complexity 1 35 0 234 234 31 0 chr17 51773678 51773742 -33664738 + MER116 DNA Mariner 1 66 -14 686 189 16 0 chr17 51773750 51773872 -33664608 - FLAM_C SINE Alu -17 126 3 847 161 0 21 chr17 51773911 51774054 -33664426 + FLAM_C SINE Alu 1 140 -3 2011 123 35 0 chr17 51774604 51774889 -33663591 - AluSg SINE Alu -15 295 1 287 284 43 7 chr17 51775082 51775223 -33663257 + (CTTA)n Simple_repeat Simple_repeat 2 147 0 2316 123 0 0 chr17 51775239 51775549 -33662931 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr17 51776270 51776298 -33662182 + AT_rich Low_complexity Low_complexity 1 28 0 248 186 0 0 chr17 51777734 51777777 -33660703 - L2 LINE L2 -8 3264 3222 1643 181 0 17 chr17 51778003 51778295 -33660185 + AluJo SINE Alu 1 287 -25 211 27 27 27 chr17 51778298 51778335 -33660145 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 1839 161 39 15 chr17 51778561 51778897 -33659583 - MER2 DNA MER2_type 0 344 1 183 312 235 12 chr17 51778910 51779080 -33659400 + L3 LINE CR1 117 324 -1253 374 238 38 29 chr17 51779128 51779233 -33659247 + L2 LINE L2 3192 3297 -16 * 737 294 88 79 chr17 51779227 51779385 -33659095 + L3 LINE CR1 363 518 -1059 2174 112 23 3 chr17 51779385 51779690 -33658790 - AluSx SINE Alu 0 312 2 737 294 88 79 chr17 51779690 51779801 -33658679 + L3 LINE CR1 518 627 -950 2120 98 17 17 chr17 51779801 51780096 -33658384 - AluSc SINE Alu -14 295 1 737 294 88 79 chr17 51780096 51780243 -33658237 + L3 LINE CR1 627 771 -806 1740 175 7 13 chr17 51780243 51780546 -33657934 + AluJb SINE Alu 1 301 -11 1946 139 7 0 chr17 51780548 51780828 -33657652 + AluSx SINE Alu 3 284 -28 737 294 88 79 chr17 51780828 51781067 -33657413 + L3 LINE CR1 771 1029 -548 425 167 14 0 chr17 51781121 51781193 -33657287 + MER81 DNA DNA 42 114 0 384 271 56 144 chr17 51781200 51781539 -33656941 + L3 LINE CR1 1114 1422 -155 1517 169 16 54 chr17 51782325 51782639 -33655841 - AluJb SINE Alu 0 312 11 290 225 20 14 chr17 51782639 51782745 -33655735 - AluJ/FLAM SINE Alu -226 76 1 781 111 0 97 chr17 51782745 51782778 -33655702 + AluJo SINE Alu 5 40 -272 2258 109 0 0 chr17 51782778 51783071 -33655409 - AluSx SINE Alu -19 293 1 781 111 0 97 chr17 51783071 51783165 -33655315 + AluJo SINE Alu 40 119 -193 216 86 0 0 chr17 51783165 51783200 -33655280 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 781 111 0 97 chr17 51783200 51783215 -33655265 + AluJo SINE Alu 119 134 -178 1615 146 55 22 chr17 51783222 51783520 -33654960 + AluJb SINE Alu 1 307 0 1990 153 3 3 chr17 51783622 51783923 -33654557 - AluSx SINE Alu -11 301 1 2492 81 0 0 chr17 51783953 51784261 -33654219 + AluY SINE Alu 1 308 -3 1960 161 0 0 chr17 51784271 51784556 -33653924 + AluJb SINE Alu 1 285 -27 2288 108 0 7 chr17 51784660 51784967 -33653513 + AluSx SINE Alu 1 305 -7 1851 72 4 36 chr17 51785113 51785389 -33653091 + L1PA13 LINE L1 5893 6159 -4 200 227 0 0 chr17 51785571 51785615 -33652865 + A-rich Low_complexity Low_complexity 1 44 0 1792 100 67 19 chr17 51785621 51785890 -33652590 + AluSx SINE Alu 1 282 -30 236 196 0 0 chr17 51785987 51786038 -33652442 + A-rich Low_complexity Low_complexity 1 51 0 888 150 0 0 chr17 51786040 51786180 -33652300 + FLAM_C SINE Alu 1 140 -3 775 269 50 50 chr17 51786581 51786653 -33651827 + MARNA DNA Mariner 93 164 -422 2433 77 7 0 chr17 51786653 51786950 -33651530 - AluY SINE Alu -12 299 1 775 269 50 50 chr17 51786950 51787234 -33651246 + MARNA DNA Mariner 163 449 -137 243 270 112 11 chr17 51787265 51787354 -33651126 + MIR SINE MIR 5 102 -160 443 291 154 5 chr17 51787571 51787819 -33650661 - L2 LINE L2 -290 3023 2746 2272 89 10 0 chr17 51787935 51788227 -33650253 - AluSg SINE Alu -15 295 1 255 168 261 42 chr17 51788447 51788566 -33649914 + MER103 DNA DNA 1 145 -21 978 276 72 46 chr17 51788968 51789511 -33648969 + L1ME1 LINE L1 314 870 -5249 536 233 83 22 chr17 51789517 51789745 -33648735 + L1ME1 LINE L1 976 1217 -4902 1694 164 0 61 chr17 51789748 51790078 -33648402 + AluJo SINE Alu 1 310 -2 394 247 81 46 chr17 51790207 51790381 -33648099 + HAL1 LINE L1 736 915 -1592 483 268 131 43 chr17 51790413 51790879 -33647601 + HAL1 LINE L1 1016 1522 -985 1837 235 56 37 chr17 51790940 51791100 -33647380 + L1ME1 LINE L1 3123 3278 -2851 2117 118 0 32 chr17 51791100 51791414 -33647066 + AluSx SINE Alu 1 304 -8 1837 235 56 37 chr17 51791414 51791686 -33646794 + L1ME1 LINE L1 3278 3543 -2586 2356 89 3 10 chr17 51791686 51791988 -33646492 - AluSp SINE Alu -13 300 1 1837 235 56 37 chr17 51791988 51792131 -33646349 + L1ME1 LINE L1 3543 3682 -2447 2096 137 0 7 chr17 51792131 51792430 -33646050 - AluSx SINE Alu -15 297 1 1837 235 56 37 chr17 51792430 51792670 -33645810 + L1ME1 LINE L1 3682 3956 -2173 1204 220 34 0 chr17 51792661 51792984 -33645496 + L1ME1 LINE L1 4484 4817 -1312 * 265 230 7 7 chr17 51793008 51793156 -33645324 + (TA)n Simple_repeat Simple_repeat 1 148 0 2160 134 3 0 chr17 51793238 51793537 -33644943 - AluSx SINE Alu -12 300 1 2034 197 110 40 chr17 51793713 51794008 -33644472 + L1ME1 LINE L1 4821 5094 -1055 2286 116 7 0 chr17 51794008 51794318 -33644162 + AluSx SINE Alu 1 312 0 2034 197 110 40 chr17 51794318 51795193 -33643287 + L1ME1 LINE L1 5094 6077 -72 371 164 254 22 chr17 51795112 51795246 -33643234 + L1MA10 LINE L1 6152 6316 -1 * 991 255 117 40 chr17 51795241 51795770 -33642710 + HAL1 LINE L1 1583 2152 -355 2215 128 0 0 chr17 51795810 51796106 -33642374 + AluSx SINE Alu 1 296 -16 356 327 92 0 chr17 51796400 51796553 -33641927 - L1MC4 LINE L1 -33 8009 7843 682 201 123 28 chr17 51796572 51796751 -33641729 - MER20 DNA MER1_type 0 219 24 549 285 65 4 chr17 51796796 51797056 -33641424 - L1MC4 LINE L1 -198 7844 7569 2404 189 72 38 chr17 51797138 51797832 -33640648 - L1MC3 LINE L1 -17 7768 7051 2277 240 120 49 chr17 51797914 51797973 -33640507 - L1MC4a LINE L1 -451 7357 7304 1854 143 20 7 chr17 51797973 51798266 -33640214 - AluJb SINE Alu -15 297 1 2277 240 120 49 chr17 51798266 51798568 -33639912 - L1MC4a LINE L1 -504 7304 7025 2038 114 14 10 chr17 51798568 51798858 -33639622 - AluSq SINE Alu -22 291 1 2277 240 120 49 chr17 51798858 51799573 -33638907 - L1MC4a LINE L1 -783 7025 6204 1772 218 90 27 chr17 51799683 51800274 -33638206 - L1MC4a LINE L1 -1754 6054 5427 643 245 171 19 chr17 51800305 51800684 -33637796 - L1MC4 LINE L1 -4 8038 7602 746 144 0 0 chr17 51800694 51800805 -33637675 - FLAM_A SINE Alu -18 124 14 1427 254 88 57 chr17 51800826 51801417 -33637063 - L1MC4 LINE L1 -477 7565 6943 1848 145 35 0 chr17 51801417 51801700 -33636780 - AluSx SINE Alu -19 293 1 1427 254 88 57 chr17 51801700 51801882 -33636598 - L1MC4 LINE L1 -1099 6943 6768 2177 90 7 10 chr17 51801902 51802192 -33636288 - AluSc SINE Alu -20 289 1 257 322 116 0 chr17 51802495 51802737 -33635743 - L1MC4a LINE L1 -1123 5023 4754 1480 135 82 11 chr17 51803083 51803427 -33635053 - Tigger4(Zombi) DNA MER2_type -1 2730 2 683 279 125 56 chr17 51803501 51803636 -33634844 - L1MC4a LINE L1 -1831 4315 4191 2207 105 0 14 chr17 51803636 51803932 -33634548 - AluSx SINE Alu -20 292 1 683 279 125 56 chr17 51803932 51804434 -33634046 - L1MC4a LINE L1 -1955 4191 3725 1810 182 0 10 chr17 51804434 51804742 -33633738 - AluJb SINE Alu -7 305 1 683 279 125 56 chr17 51804742 51805438 -33633042 - L1MC4a LINE L1 -2421 3725 2889 802 245 106 12 chr17 51805475 51805810 -33632670 - L1ME2 LINE L1 -106 6058 5667 1689 152 0 32 chr17 51805961 51806238 -33632242 + AluJb SINE Alu 1 268 -44 526 309 66 36 chr17 51806350 51806654 -33631826 - L1MC4a LINE L1 -3594 2552 2240 1873 138 0 34 chr17 51806906 51807197 -33631283 - AluJb SINE Alu -31 281 1 313 280 93 53 chr17 51807206 51807356 -33631124 - HAL1b LINE L1 -510 838 683 566 273 90 13 chr17 51807402 51807713 -33630767 - HAL1b LINE L1 -737 611 277 1899 148 4 0 chr17 51808786 51809057 -33629423 - AluSx SINE Alu -40 272 1 458 248 181 7 chr17 51809101 51809250 -33629230 - MIR SINE MIR -10 252 78 2026 126 6 31 chr17 51809436 51809753 -33628727 + AluSx SINE Alu 1 309 -3 398 237 111 29 chr17 51809882 51810089 -33628391 + HAL1 LINE L1 2284 2507 0 576 281 57 50 chr17 51810149 51810430 -33628050 + L1ME LINE L1 5482 5764 -357 207 331 110 13 chr17 51811601 51811755 -33626725 + MIR SINE MIR 44 212 -50 2273 113 0 0 chr17 51811993 51812295 -33626185 + AluSg SINE Alu 1 302 -8 1862 150 16 23 chr17 51812581 51812888 -33625592 - AluJb SINE Alu -5 307 3 195 341 68 0 chr17 51812894 51812982 -33625498 - L2 LINE L2 -10 3262 3169 279 274 36 51 chr17 51813212 51813361 -33625119 - MIR SINE MIR -53 155 38 304 288 101 40 chr17 51813423 51813583 -33624897 + MER5A DNA MER1_type 17 173 -5 327 217 96 72 chr17 51813583 51813749 -33624731 + MER3 DNA MER1_type 36 205 -4 * 991 157 11 43 chr17 51813615 51813800 -33624680 - MER3 DNA MER1_type -30 179 1 191 255 130 59 chr17 51813803 51813904 -33624576 - MIR3 SINE MIR -50 158 49 522 238 139 35 chr17 51816045 51816217 -33622263 + L3 LINE CR1 1385 1574 -3 22 35 0 0 chr17 51817724 51817753 -33620727 + GC_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr17 51817927 51817970 -33620510 + GC_rich Low_complexity Low_complexity 1 43 0 637 240 54 54 chr17 51818531 51818773 -33619707 - L2 LINE L2 -39 3274 3033 2222 72 20 14 chr17 51819084 51819376 -33619104 - AluSg SINE Alu -16 294 1 313 234 0 0 chr17 51819447 51819511 -33618969 - AluJ/monomer SINE Alu -1 301 238 1253 162 5 22 chr17 51819618 51819840 -33618640 - AluJo SINE Alu -90 222 5 244 264 104 80 chr17 51820476 51820601 -33617879 - L1ME4a LINE L1 -39 6082 5955 494 303 104 9 chr17 51820601 51820812 -33617668 + MIR SINE MIR 14 244 -18 481 311 70 59 chr17 51820847 51821021 -33617459 - L1ME4a LINE L1 -202 5919 5748 2102 117 3 38 chr17 51821021 51821338 -33617142 - AluSx SINE Alu -6 306 1 481 311 70 59 chr17 51821338 51821622 -33616858 - L1ME4a LINE L1 -373 5748 5456 2167 122 14 0 chr17 51821680 51821975 -33616505 - AluSx SINE Alu -13 299 1 2015 135 3 0 chr17 51822259 51822555 -33615925 - AluSq SINE Alu -16 297 1 2127 117 7 3 chr17 51822555 51822854 -33615626 - AluSc SINE Alu -9 300 1 448 279 70 40 chr17 51823576 51823777 -33614703 - L1MC4 LINE L1 -72 7970 7764 819 178 203 12 chr17 51823862 51824025 -33614455 - AluJb SINE Alu -23 289 96 1356 143 22 22 chr17 51824025 51824255 -33614225 - AluJo SINE Alu -82 230 1 710 146 42 165 chr17 51824328 51824540 -33613940 - L1MB5 LINE L1 0 6174 5989 320 268 130 8 chr17 51824543 51824666 -33613814 - L1MC5 LINE L1 -553 7408 7271 458 292 30 6 chr17 51824723 51824891 -33613589 - L1MEc LINE L1 -6133 263 92 2377 65 0 52 chr17 51824993 51825318 -33613162 - AluY SINE Alu -3 308 1 247 336 51 29 chr17 51825335 51825472 -33613008 - L3 LINE CR1 -324 1253 1114 1953 154 0 25 chr17 51825998 51826317 -33612163 + AluJb SINE Alu 2 312 0 233 276 66 13 chr17 51826733 51826809 -33611671 - L3 LINE CR1 -15 1562 1483 279 0 0 0 chr17 51826832 51826863 -33611617 + (TG)n Simple_repeat Simple_repeat 2 32 0 1659 137 86 4 chr17 51826869 51827124 -33611356 - AluSg SINE Alu -34 276 1 1019 252 152 15 chr17 51827463 51827852 -33610628 - MLT1J1 LTR MaLR -4 442 1 298 279 108 23 chr17 51827864 51827993 -33610487 - MIR3 SINE MIR -50 158 19 247 241 128 35 chr17 51828148 51828289 -33610191 - L1MEc LINE L1 -4862 1343 1190 1253 153 18 48 chr17 51828295 51828523 -33609957 - AluJo SINE Alu -8 304 84 456 297 49 81 chr17 51828524 51828659 -33609821 - L1MEc LINE L1 -5046 1181 1043 2036 146 7 0 chr17 51828659 51828960 -33609520 - AluSx SINE Alu -9 303 1 456 297 49 81 chr17 51828960 51829079 -33609401 - L1MEc LINE L1 -5184 1043 922 2255 128 0 0 chr17 51829079 51829391 -33609089 - AluSx SINE Alu 0 312 1 456 297 49 81 chr17 51829391 51829533 -33608947 - L1MEc LINE L1 -5305 922 791 225 259 74 90 chr17 51829886 51830075 -33608405 - L3 LINE CR1 -600 977 792 23 0 0 0 chr17 51830171 51830194 -33608286 + AT_rich Low_complexity Low_complexity 1 23 0 569 187 22 0 chr17 51830640 51830767 -33607713 + FRAM SINE Alu 59 187 0 722 328 93 26 chr17 51830797 51831259 -33607221 + L2 LINE L2 2554 3054 -259 2089 83 7 35 chr17 51831429 51831742 -33606738 - AluSp SINE Alu 0 306 2 2340 97 3 0 chr17 51831908 51832207 -33606273 + AluSp SINE Alu 1 300 -13 1015 218 10 10 chr17 51833813 51834019 -33604461 - MER21B LTR ERV1 -428 435 230 237 264 308 22 chr17 51834572 51834663 -33603817 + MIR3 SINE MIR 8 124 -84 22 35 0 0 chr17 51834695 51834724 -33603756 + AT_rich Low_complexity Low_complexity 1 29 0 481 208 195 7 chr17 51835178 51835327 -33603153 - MER5A DNA MER1_type 0 189 13 1949 138 7 3 chr17 51837524 51837815 -33600665 + AluSx SINE Alu 1 292 -20 331 132 0 0 chr17 51837830 51837883 -33600597 + Alu SINE Alu 249 301 0 1734 133 4 0 chr17 51837888 51838129 -33600351 + AluSx SINE Alu 1 242 -70 216 0 0 0 chr17 51838134 51838158 -33600322 + (TA)n Simple_repeat Simple_repeat 2 25 0 590 181 35 49 chr17 51838340 51838484 -33599996 + LTR48B LTR ERV1 492 633 -11 1587 153 14 24 chr17 51838488 51838801 -33599679 + L1MD1 LINE L1 5915 8035 -7 31 68 0 0 chr17 51839235 51839294 -33599186 + AT_rich Low_complexity Low_complexity 1 59 0 401 114 0 14 chr17 51839466 51839536 -33598944 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 2220 123 3 3 chr17 51839851 51840161 -33598319 - AluSx SINE Alu -2 310 1 2168 110 3 0 chr17 51840163 51840453 -33598027 - AluSx SINE Alu -14 298 8 2106 118 7 3 chr17 51840610 51840907 -33597573 - AluSx SINE Alu -14 298 1 2226 125 0 0 chr17 51841771 51842084 -33596396 + AluSq SINE Alu 1 313 0 1889 162 59 6 chr17 51842546 51842867 -33595613 + MER44D DNA MER2_type 1 608 -1 1631 34 19 34 chr17 51843815 51844023 -33594457 - L1PA4 LINE L1 0 6155 5951 191 312 194 13 chr17 51844322 51844559 -33593921 - L2 LINE L2 -652 2662 2383 3100 160 32 46 chr17 51845662 51846178 -33592302 - MER68 LTR ERV1 0 562 53 2221 100 0 37 chr17 51846178 51846499 -33591981 - AluSg SINE Alu -1 309 1 3100 160 32 46 chr17 51846499 51846552 -33591928 - MER68 LTR ERV1 -509 53 1 2064 121 0 0 chr17 51847127 51847431 -33591049 + AluSx SINE Alu 2 305 0 620 119 0 0 chr17 51848104 51848188 -33590292 + AluS SINE Alu 1 84 -228 2157 133 3 13 chr17 51848446 51848761 -33589719 + AluSx SINE Alu 1 312 0 186 250 231 0 chr17 51850184 51850236 -33588244 - L2 LINE L2 0 3272 3209 1198 162 28 32 chr17 51850301 51850412 -33588068 + L1PB4 LINE L1 5938 6049 -107 1340 61 162 0 chr17 51850412 51850610 -33587870 - MER30 DNA MER1_type 0 230 1 1198 162 28 32 chr17 51850610 51850714 -33587766 + L1PB4 LINE L1 6049 6152 -4 7868 33 5 6 chr17 51851194 51852809 -33585671 - L1PA4 LINE L1 -3 6152 4542 243 298 79 35 chr17 51857058 51857172 -33581308 - MIR SINE MIR -58 204 86 266 364 0 0 chr17 51857188 51857276 -33581204 + Charlie7 DNA MER1_type 1 88 -2524 1031 85 0 0 chr17 51857296 51857425 -33581055 + AluSc SINE Alu 161 289 -20 2402 82 3 3 chr17 51857488 51857794 -33580686 - AluSq SINE Alu -7 306 1 1950 145 3 3 chr17 51857832 51858122 -33580358 - AluJb SINE Alu -13 299 10 1059 104 42 72 chr17 51858380 51858532 -33579948 + L1MA2 LINE L1 6063 6209 -95 2172 84 52 0 chr17 51858532 51858818 -33579662 - AluSx SINE Alu -11 301 1 1059 104 42 72 chr17 51858818 51858858 -33579622 + L1MA2 LINE L1 6209 6249 -55 994 134 28 17 chr17 51858904 51859065 -33579415 - MER4E LTR ERV1 -1 765 603 587 124 10 21 chr17 51859065 51859162 -33579318 + MER4A LTR ERV1 3 98 -566 1977 118 3 30 chr17 51859162 51859517 -33578963 + MER4A LTR ERV1 261 664 0 5689 179 102 93 chr17 51859520 51860680 -33577800 + MER4A-int LTR ERV1 1 1149 -5449 336 64 0 0 chr17 51860680 51860727 -33577753 + (TG)n Simple_repeat Simple_repeat 2 48 0 5689 179 102 93 chr17 51860727 51860923 -33577557 + MER4A-int LTR ERV1 1149 1342 -5256 2191 53 0 15 chr17 51860923 51861218 -33577262 + AluY SINE Alu 24 314 0 5689 179 102 93 chr17 51861218 51861937 -33576543 + MER4A-int LTR ERV1 1342 2097 -4501 30811 78 18 12 chr17 51861943 51868058 -33570422 + L1PA6 LINE L1 11 6150 -4 2645 72 3 21 chr17 51868058 51868445 -33570035 + MER4A-int LTR ERV1 1270 1649 -3366 1371 131 78 25 chr17 51868445 51868542 -33569938 - LTR8 LTR ERV1 -434 257 167 3331 74 32 5 chr17 51868542 51868582 -33569898 - MLT2A1 LTR ERVL 0 444 407 269 100 20 0 chr17 51868582 51868632 -33569848 + (TA)n Simple_repeat Simple_repeat 1 51 0 3331 74 32 5 chr17 51868632 51869023 -33569457 - MLT2A1 LTR ERVL -37 407 1 1371 131 78 25 chr17 51869023 51869169 -33569311 - LTR8 LTR ERV1 -524 167 1 4090 113 76 63 chr17 51869169 51869494 -33568986 + MER4A-int LTR ERV1 2737 3056 -3542 1946 168 3 0 chr17 51869494 51869797 -33568683 + AluSx SINE Alu 1 304 -8 4090 113 76 63 chr17 51869797 51869848 -33568632 + MER4A-int LTR ERV1 3056 3105 -3493 2089 142 7 0 chr17 51869848 51870144 -33568336 - AluSx SINE Alu -14 298 1 4090 113 76 63 chr17 51870144 51870235 -33568245 + MER4A-int LTR ERV1 3105 3193 -3405 2315 92 7 7 chr17 51870235 51870539 -33567941 + AluSq SINE Alu 1 304 -9 4090 113 76 63 chr17 51870539 51870737 -33567743 + MER4A-int LTR ERV1 3193 3387 -3211 2324 112 0 0 chr17 51870737 51871040 -33567440 - AluSx SINE Alu -9 303 1 4090 113 76 63 chr17 51871040 51871304 -33567176 + MER4A-int LTR ERV1 3387 3681 -2917 * 16251 109 47 31 chr17 51871303 51871431 -33567049 + MER4A-int LTR ERV1 3837 3961 -2637 1875 117 40 0 chr17 51871431 51871704 -33566776 - AluSc SINE Alu -9 300 17 16251 109 47 31 chr17 51871704 51871731 -33566749 + MER4A-int LTR ERV1 3961 3986 -2612 2310 98 0 0 chr17 51871731 51872018 -33566462 + AluSg SINE Alu 1 287 -23 16251 109 47 31 chr17 51872018 51872127 -33566353 + MER4A-int LTR ERV1 3986 4092 -2506 2146 141 3 6 chr17 51872127 51872439 -33566041 + AluSq SINE Alu 1 311 -2 16251 109 47 31 chr17 51872439 51874890 -33563590 + MER4A-int LTR ERV1 4092 6598 0 652 121 0 10 chr17 51874891 51874990 -33563490 + MER4A LTR ERV1 1 98 -566 1760 119 3 64 chr17 51874990 51875300 -33563180 + MER4A LTR ERV1 261 607 -57 2493 78 13 0 chr17 51875300 51875606 -33562874 - AluSp SINE Alu -3 310 1 1760 119 3 64 chr17 51875606 51875649 -33562831 + MER4A LTR ERV1 607 651 -13 526 160 17 50 chr17 51875644 51875763 -33562717 - MER4D LTR ERV1 -160 743 629 * 1649 146 65 4 chr17 51875768 51876029 -33562451 + AluJo SINE Alu 5 281 -31 2930 135 73 29 chr17 51876037 51876586 -33561894 - LTR10A LTR ERV1 -36 573 1 4567 100 6 8 chr17 51876661 51877302 -33561178 - MER4D LTR ERV1 -263 640 1 192 158 0 0 chr17 51877890 51877928 -33560552 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 325 329 7 14 chr17 51878031 51878174 -33560306 - L2 LINE L2 -146 3126 2985 1674 131 106 7 chr17 51878402 51878677 -33559803 + AluJb SINE Alu 1 302 -10 314 143 71 60 chr17 51878698 51878782 -33559698 - LTR37B LTR ERV1 -382 86 2 199 279 15 59 chr17 51879036 51879104 -33559376 - MIR SINE MIR -101 107 43 770 235 120 4 chr17 51879594 51879828 -33558652 + MIR SINE MIR 2 262 0 432 278 46 46 chr17 51879833 51880006 -33558474 - MIR SINE MIR -70 192 20 249 234 26 26 chr17 51880642 51880719 -33557761 + MIR SINE MIR 71 147 -115 233 239 14 28 chr17 51880911 51880982 -33557498 - L1ME LINE L1 -535 5586 5517 296 273 113 52 chr17 51880999 51881193 -33557287 - L1ME3A LINE L1 -2 6168 5963 2704 202 47 74 chr17 51881277 51881882 -33556598 - L1MC5 LINE L1 -431 7530 6953 1364 117 75 5 chr17 51881882 51882095 -33556385 - MER30 DNA MER1_type 0 230 3 2704 202 47 74 chr17 51882095 51882326 -33556154 - L1MC5 LINE L1 -1008 6953 6717 1976 180 43 63 chr17 51882327 51882715 -33555765 + MLT2A2 LTR ERVL 1 380 -174 2194 101 49 0 chr17 51882715 51883003 -33555477 - AluSx SINE Alu -10 302 1 1976 180 43 63 chr17 51883003 51883175 -33555305 + MLT2A2 LTR ERVL 380 554 0 262 246 58 14 chr17 51883188 51883257 -33555223 - L1MC5 LINE L1 -1254 6707 6636 658 301 68 41 chr17 51883287 51883775 -33554705 - HAL1b LINE L1 -775 573 73 264 59 0 0 chr17 51883806 51883840 -33554640 + (TC)n Simple_repeat Simple_repeat 1 34 0 625 153 0 27 chr17 51883845 51883956 -33554524 - FLAM_C SINE Alu -25 118 11 28935 70 8 22 chr17 51883983 51887896 -33550584 + L1P LINE L1 609 4466 -1680 2780 46 0 15 chr17 51887896 51888225 -33550255 + SVA Other Other 1063 1386 0 15164 49 2 4 chr17 51888226 51890071 -33548409 - L1P LINE L1 -4304 1842 1 381 272 129 42 chr17 51890790 51891007 -33547473 - MIR SINE MIR -14 248 13 948 235 20 0 chr17 51891017 51891221 -33547259 - LTR16A LTR ERVL -11 439 232 201 226 0 0 chr17 51891305 51891358 -33547122 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 2290 110 0 3 chr17 51891647 51891947 -33546533 - AluSg SINE Alu -11 299 1 1724 174 64 6 chr17 51891958 51892303 -33546177 - MLT1A1 LTR MaLR 0 365 1 1759 130 136 15 chr17 51893226 51893557 -33544923 + MLT1B LTR MaLR 14 384 -6 256 275 147 0 chr17 51893618 51893727 -33544753 - L2 LINE L2 -14 3258 3134 2412 211 29 22 chr17 51894048 51894598 -33543882 + MLT2B3 LTR ERVL 1 554 0 217 275 73 28 chr17 51895411 51895460 -33543020 - MIR SINE MIR -54 208 163 1985 118 21 11 chr17 51895460 51895630 -33542850 - AluSx SINE Alu 0 305 129 270 0 0 0 chr17 51895630 51895660 -33542820 + (TA)n Simple_repeat Simple_repeat 2 31 0 1985 118 21 11 chr17 51895660 51895791 -33542689 - AluSx SINE Alu -176 129 1 1936 158 0 10 chr17 51895793 51896103 -33542377 - AluJb SINE Alu -5 307 1 217 275 73 28 chr17 51896103 51896158 -33542322 - MIR SINE MIR -99 163 95 477 233 0 0 chr17 51896239 51896325 -33542155 + MER58B DNA MER1_type 1 86 -255 1113 180 10 5 chr17 51896325 51896519 -33541961 - AluJb SINE Alu -12 300 106 2021 152 0 0 chr17 51896558 51896855 -33541625 - AluJb SINE Alu -15 297 1 402 138 0 0 chr17 51897303 51897361 -33541119 - AluJb SINE Alu -203 99 42 450 132 0 0 chr17 51897363 51897460 -33541020 + AluJ/FRAM SINE Alu 218 314 0 1225 193 31 4 chr17 51897521 51897775 -33540705 + MER58B DNA MER1_type 79 339 -2 252 333 40 47 chr17 51898680 51898736 -33539744 + L2 LINE L2 3122 3177 -95 216 0 0 0 chr17 51898736 51898760 -33539720 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 2354 85 0 7 chr17 51898762 51899056 -33539424 - AluSq SINE Alu -21 292 1 252 333 40 47 chr17 51899056 51899146 -33539334 + L2 LINE L2 3178 3270 -2 189 94 0 0 chr17 51900124 51900156 -33538324 + (T)n Simple_repeat Simple_repeat 1 32 0 395 325 66 22 chr17 51900419 51900693 -33537787 + L2 LINE L2 2406 2691 -623 467 276 19 11 chr17 51900694 51900857 -33537623 - L1PB4 LINE L1 -1 6164 6003 1109 149 0 0 chr17 51900908 51901069 -33537411 - FRAM SINE Alu -16 160 1 2147 123 3 3 chr17 51901106 51901414 -33537066 - AluSx SINE Alu 0 312 5 192 339 85 8 chr17 51901530 51901648 -33536832 + L2 LINE L2 3169 3295 -18 2040 98 0 75 chr17 51901845 51902179 -33536301 + AluSx SINE Alu 1 311 0 356 301 161 14 chr17 51902923 51903066 -33535414 + MIR SINE MIR 27 190 -72 459 227 17 17 chr17 51903180 51903299 -33535181 + MIR SINE MIR 30 148 -114 325 288 137 20 chr17 51904081 51904227 -33534253 + MIR SINE MIR 28 190 -72 309 306 70 30 chr17 51904805 51904972 -33533508 + MIR SINE MIR 2 180 -28 349 219 219 17 chr17 51905034 51905153 -33533327 + MER103 DNA DNA 17 159 -7 280 329 0 0 chr17 51905201 51905277 -33533203 + MIR SINE MIR 5 80 -182 1315 255 145 22 chr17 51905278 51905786 -33532694 - MLT1F1 LTR MaLR 0 567 1 424 200 233 0 chr17 51905786 51905936 -33532544 + MIR SINE MIR 77 261 -1 233 250 0 0 chr17 51905941 51905997 -33532483 + L2 LINE L2 3255 3310 -3 281 313 31 0 chr17 51906046 51906142 -33532338 + MIR SINE MIR 158 256 -6 251 191 16 0 chr17 51906208 51906271 -33532209 + CT-rich Low_complexity Low_complexity 4 67 0 1104 158 13 66 chr17 51907471 51907699 -33530781 + MER20 DNA MER1_type 3 218 -1 461 188 18 27 chr17 51908560 51908672 -33529808 + MER103 DNA DNA 56 166 0 253 200 0 20 chr17 51908751 51908801 -33529679 + C-rich Low_complexity Low_complexity 2 50 0 298 304 7 51 chr17 51908901 51909039 -33529441 + L2 LINE L2 2920 3051 -221 2244 130 0 0 chr17 51909275 51909582 -33528898 + AluJo SINE Alu 3 309 -3 225 239 34 57 chr17 51910015 51910103 -33528377 - L2 LINE L2 -2 3270 3185 245 250 43 22 chr17 51910856 51910948 -33527532 - MIR SINE MIR -92 116 23 298 340 57 0 chr17 51911094 51911235 -33527245 + MIR SINE MIR 111 259 -3 283 273 127 13 chr17 51911768 51911918 -33526562 - MIR SINE MIR -14 248 82 275 305 86 74 chr17 51912587 51912766 -33525714 - MIR SINE MIR -63 145 3 198 103 0 0 chr17 51913395 51913424 -33525056 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2297 110 0 0 chr17 51914209 51914510 -33523970 - AluSx SINE Alu -11 301 1 266 163 13 20 chr17 51914510 51914710 -33523770 - L1MA10 LINE L1 -10 6324 6100 965 152 5 21 chr17 51914519 51914710 -33523770 - L1MA7 LINE L1 -4 6287 6100 2236 104 0 0 chr17 51914710 51915008 -33523472 + AluSx SINE Alu 1 298 -14 3790 163 23 14 chr17 51915008 51915627 -33522853 - L1MA7 LINE L1 -357 5934 5301 1656 146 0 70 chr17 51915627 51915957 -33522523 + AluJb SINE Alu 1 307 -5 3790 163 23 14 chr17 51915957 51916239 -33522241 - L1MA7 LINE L1 -990 5301 5023 671 271 0 13 chr17 51916618 51916769 -33521711 + MIR SINE MIR 18 166 -96 474 214 64 40 chr17 51917176 51917317 -33521163 + LTR67 LTR ERVL 381 528 -29 1933 155 0 0 chr17 51917317 51917621 -33520859 - AluSg SINE Alu -1 309 6 474 214 64 40 chr17 51917621 51917652 -33520828 + LTR67 LTR ERVL 528 557 0 270 264 81 11 chr17 51917654 51917741 -33520739 + MIR SINE MIR 160 252 -10 272 244 56 11 chr17 51917806 51917896 -33520584 + MIR3 SINE MIR 109 202 -6 261 86 0 0 chr17 51917900 51917935 -33520545 - MLT1A2 LTR MaLR 0 374 340 2137 208 118 50 chr17 51917935 51918435 -33520045 - MER50 LTR ERV1 0 734 269 2172 97 7 0 chr17 51918435 51918733 -33519747 - AluSp SINE Alu -13 300 1 2137 208 118 50 chr17 51918733 51918810 -33519670 - MER50 LTR ERV1 -465 269 199 1910 149 0 7 chr17 51918810 51919118 -33519362 - AluSx SINE Alu -6 306 1 2137 208 118 50 chr17 51919118 51919218 -33519262 - MER50 LTR ERV1 -535 199 10 1718 169 40 56 chr17 51919202 51919575 -33518905 - MLT1A2 LTR MaLR -7 367 1 * 499 196 125 9 chr17 51919907 51920019 -33518461 + MIR SINE MIR 20 144 -64 293 296 50 45 chr17 51920654 51920688 -33517792 - MIR SINE MIR -60 202 170 1940 215 54 9 chr17 51920688 51921134 -33517346 - MLT1C LTR MaLR -1 466 1 293 296 50 45 chr17 51921134 51921284 -33517196 - MIR SINE MIR -92 170 22 292 292 0 14 chr17 51921367 51921439 -33517041 + MER5A DNA MER1_type 119 189 0 559 225 152 0 chr17 51921550 51921701 -33516779 - MER5A DNA MER1_type -7 182 9 331 326 234 7 chr17 51921746 51921887 -33516593 + MER5B DNA MER1_type 5 177 -1 2341 150 179 35 chr17 51922340 51922853 -33515627 - LTR18B LTR ERVL -27 587 1 1270 267 112 42 chr17 51923006 51923745 -33514735 + LTR1B LTR ERV1 36 826 0 398 252 8 71 chr17 51923824 51923951 -33514529 + MIR SINE MIR 113 231 -31 850 237 139 0 chr17 51924207 51924422 -33514058 + MIR SINE MIR 1 245 -17 404 338 102 0 chr17 51924482 51924639 -33513841 - MIR SINE MIR -70 192 20 7393 43 15 0 chr17 51924658 51925684 -33512796 - L1PA7 LINE L1 0 6154 5128 180 306 28 14 chr17 51926161 51926233 -33512247 + MIR3 SINE MIR 104 176 -32 535 288 60 16 chr17 51926434 51926618 -33511862 - MIR3 SINE MIR -7 201 10 186 188 0 141 chr17 51927849 51927913 -33510567 - L2 LINE L2 -1 3271 3217 * 701 276 83 14 chr17 51927882 51928099 -33510381 - MIR SINE MIR -19 243 12 294 293 7 41 chr17 51928129 51928243 -33510237 + HAL1b LINE L1 1200 1309 -39 2295 63 3 7 chr17 51928243 51928543 -33509937 - AluSc SINE Alu -10 299 1 294 293 7 41 chr17 51928543 51928575 -33509905 + HAL1b LINE L1 1309 1341 -7 1305 254 84 28 chr17 51929488 51929914 -33508566 - MLT1J2 LTR MaLR 0 450 1 355 293 33 13 chr17 51929938 51930088 -33508392 + L1ME LINE L1 5642 5794 -327 370 282 120 0 chr17 51930426 51930543 -33507937 + L2 LINE L2 3137 3267 -5 457 126 53 21 chr17 51931160 51931255 -33507225 + MER53 DNA DNA 7 104 -85 2005 142 0 3 chr17 51932404 51932713 -33505767 + AluSx SINE Alu 1 308 -4 258 116 0 0 chr17 51932761 51932804 -33505676 + (CA)n Simple_repeat Simple_repeat 2 44 0 288 213 40 13 chr17 51933569 51933644 -33504836 + MIR SINE MIR 108 184 -78 21 0 0 0 chr17 51934129 51934150 -33504330 + AT_rich Low_complexity Low_complexity 1 21 0 1902 148 0 10 chr17 51934150 51934441 -33504039 - AluJo SINE Alu -24 288 1 750 216 186 52 chr17 51934659 51935044 -33503436 - MLT1K LTR MaLR -24 564 100 302 250 83 46 chr17 51935172 51935280 -33503200 + L2 LINE L2 3161 3272 0 1228 179 60 0 chr17 51935387 51935621 -33502859 - L1MB5 LINE L1 -6 6168 5921 280 91 0 0 chr17 51935644 51935688 -33502792 - AluY SINE Alu 0 299 256 1302 89 0 0 chr17 51935689 51935857 -33502623 - AluY SINE Alu -143 168 1 1563 113 184 0 chr17 51935881 51936137 -33502343 + AluSx SINE Alu 1 303 -9 358 291 137 41 chr17 51937379 51937551 -33500929 + MIR SINE MIR 11 192 -63 441 285 8 8 chr17 51937687 51937810 -33500670 + MIR3 SINE MIR 60 182 -26 210 327 136 38 chr17 51938530 51938731 -33499749 + MIR SINE MIR 7 212 -50 187 279 29 115 chr17 51938899 51939003 -33499477 - MIR SINE MIR -164 98 4 188 244 0 22 chr17 51939043 51939088 -33499392 - L2 LINE L2 -34 3279 3236 2040 105 18 0 chr17 51940083 51940369 -33498111 - AluSx SINE Alu -21 291 1 300 329 26 90 chr17 51940734 51940968 -33497512 - L2 LINE L2 -38 3234 3016 2287 91 0 0 chr17 51942582 51942889 -33495591 - AluSq SINE Alu -6 307 1 225 313 170 0 chr17 51943191 51943303 -33495177 + L2 LINE L2 3136 3266 -6 1122 188 30 0 chr17 51943331 51943533 -33494947 - MER3 DNA MER1_type -1 208 1 1868 255 123 41 chr17 51943787 51944692 -33493788 - HAL1 LINE L1 -38 2469 1491 271 196 11 11 chr17 51944707 51944763 -33493717 + GA-rich Low_complexity Low_complexity 1 59 -33 2088 203 70 57 chr17 51944763 51945306 -33493174 - MLT2B3 LTR ERVL 0 554 5 271 196 11 11 chr17 51945306 51945341 -33493139 + GA-rich Low_complexity Low_complexity 58 92 0 641 309 51 6 chr17 51945343 51945518 -33492962 - MLT1F LTR MaLR -359 183 1 339 310 94 33 chr17 51945518 51945731 -33492749 - HAL1 LINE L1 -2129 378 153 1603 157 4 7 chr17 51946162 51946436 -33492044 + AluJb SINE Alu 1 273 -39 453 240 55 21 chr17 51946645 51946802 -33491678 - MIR3 SINE MIR -41 167 6 243 259 0 0 chr17 51947008 51947066 -33491414 + MER103 DNA DNA 57 114 -52 1729 174 103 6 chr17 51947100 51947439 -33491041 - MLT1B LTR MaLR -17 373 2 228 197 33 16 chr17 51948093 51948154 -33490326 + MER88 LTR ERVL 79 140 -324 733 266 65 13 chr17 51948237 51948456 -33490024 - MER74B LTR ERVL -301 321 88 1907 158 3 0 chr17 51948456 51948733 -33489747 + AluSx SINE Alu 1 281 -31 216 0 0 0 chr17 51948733 51948757 -33489723 + (CA)n Simple_repeat Simple_repeat 2 25 0 1907 158 3 0 chr17 51948757 51948789 -33489691 + AluSx SINE Alu 281 311 -1 2317 208 50 7 chr17 51948796 51949356 -33489124 - MLT2F LTR ERVL -9 654 1 296 64 21 0 chr17 51949403 51949450 -33489030 + (TG)n Simple_repeat Simple_repeat 2 49 0 22 0 0 0 chr17 51949664 51949686 -33488794 + AT_rich Low_complexity Low_complexity 1 22 0 1146 183 87 4 chr17 51950253 51950482 -33487998 - MLT2F LTR ERVL -12 651 404 1689 128 0 0 chr17 51950942 51951185 -33487295 - AluSg SINE Alu -14 296 54 1638 157 57 0 chr17 51952042 51952322 -33486158 + AluJb SINE Alu 3 298 -14 2025 102 3 68 chr17 51953936 51954261 -33484219 + AluSx SINE Alu 1 304 -8 567 267 92 29 chr17 51955054 51955109 -33483371 - MIR SINE MIR -33 229 179 2409 184 50 12 chr17 51955109 51955593 -33482887 + MLT1D LTR MaLR 3 504 -1 567 267 92 29 chr17 51955593 51955743 -33482737 - MIR SINE MIR -83 179 11 519 309 118 18 chr17 51956374 51956594 -33481886 - MIR SINE MIR 0 262 21 2203 117 3 0 chr17 51956617 51956926 -33481554 - AluSx SINE Alu -2 310 1 208 302 210 60 chr17 51956956 51957204 -33481276 + L2 LINE L2 2987 3271 -1 425 219 47 39 chr17 51957599 51957727 -33480753 + L2 LINE L2 3175 3303 -10 915 279 12 21 chr17 51958092 51958332 -33480148 + MIR SINE MIR 25 262 0 272 394 11 11 chr17 51959420 51959600 -33478880 - L3b LINE CR1 -115 1468 1289 955 180 0 17 chr17 51959723 51959901 -33478579 - FRAM SINE Alu -1 175 1 198 71 0 0 chr17 51960246 51960274 -33478206 + (TAA)n Simple_repeat Simple_repeat 2 29 0 551 288 42 72 chr17 51960286 51960527 -33477953 - MIR SINE MIR -19 243 9 360 0 0 0 chr17 51960595 51960635 -33477845 + (TG)n Simple_repeat Simple_repeat 2 41 0 313 213 0 38 chr17 51961102 51961182 -33477298 + L1ME4a LINE L1 5747 5823 -298 2167 129 0 0 chr17 51961219 51961530 -33476950 + AluSx SINE Alu 1 311 -1 294 29 0 0 chr17 51961612 51961647 -33476833 + (TG)n Simple_repeat Simple_repeat 2 36 0 202 77 0 0 chr17 51961647 51961673 -33476807 + (TA)n Simple_repeat Simple_repeat 2 27 0 410 249 59 83 chr17 51961674 51961843 -33476637 + L1ME4a LINE L1 5935 6099 -22 267 358 0 0 chr17 51961910 51962005 -33476475 - L3b LINE CR1 -202 1381 1287 36 0 0 0 chr17 51962627 51962663 -33475817 + AT_rich Low_complexity Low_complexity 1 36 0 2343 112 49 6 chr17 51962675 51963024 -33475456 + THE1B LTR MaLR 1 364 0 392 275 138 0 chr17 51963032 51963170 -33475310 + MIR SINE MIR 100 256 -6 1114 203 68 0 chr17 51963355 51963562 -33474918 + MER58A DNA MER1_type 4 224 0 327 348 7 7 chr17 51963985 51964126 -33474354 + L2 LINE L2 2487 2627 -687 184 306 111 0 chr17 51964174 51964246 -33474234 - L2 LINE L2 -46 3226 3147 * 358 384 17 17 chr17 51964241 51964478 -33474002 + L2 LINE L2 2619 2855 -459 1185 214 95 83 chr17 51964533 51964787 -33473693 - MLT1J2 LTR MaLR 0 450 200 1698 186 0 0 chr17 51964787 51965062 -33473418 + AluSx SINE Alu 1 275 -37 312 0 62 0 chr17 51965066 51965114 -33473366 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1185 214 95 83 chr17 51965114 51965285 -33473195 - MLT1J2 LTR MaLR -252 198 15 2191 118 3 3 chr17 51965306 51965612 -33472868 - AluSx SINE Alu -5 307 2 201 353 0 0 chr17 51965723 51965791 -33472689 + L2 LINE L2 2988 3055 -217 21 0 0 0 chr17 51965888 51965909 -33472571 + AT_rich Low_complexity Low_complexity 1 21 0 2404 82 3 0 chr17 51966321 51966625 -33471855 + AluY SINE Alu 1 305 -6 210 37 0 0 chr17 51966626 51966653 -33471827 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 399 202 10 10 chr17 51966677 51966776 -33471704 - MIR SINE MIR -47 215 117 1910 162 0 10 chr17 51967111 51967420 -33471060 - AluJb SINE Alu -6 306 1 440 241 0 9 chr17 51967876 51967988 -33470492 + MIR SINE MIR 151 261 -1 1942 200 48 48 chr17 51968300 51968631 -33469849 + MLT1D LTR MaLR 1 334 -171 186 43 0 0 chr17 51968631 51968654 -33469826 + (CAAGG)n Simple_repeat Simple_repeat 3 25 0 1942 200 48 48 chr17 51968654 51968827 -33469653 + MLT1D LTR MaLR 333 505 0 546 274 13 0 chr17 51968972 51969129 -33469351 - MER103 DNA DNA -1 165 7 23 33 0 0 chr17 51969221 51969251 -33469229 + AT_rich Low_complexity Low_complexity 1 30 0 214 353 43 65 chr17 51969862 51970326 -33468154 - L2 LINE L2 -1039 2275 1822 27 0 0 26 chr17 51970382 51970397 -33468083 + AT_rich Low_complexity Low_complexity 1 15 -22 1737 181 3 10 chr17 51970397 51970689 -33467791 - AluJb SINE Alu -22 290 1 27 0 0 26 chr17 51970689 51970711 -33467769 + AT_rich Low_complexity Low_complexity 15 37 0 1329 290 67 32 chr17 51970936 51972021 -33466459 + L1MEd LINE L1 981 2142 -4579 829 0 20 0 chr17 51972295 51972396 -33466084 + (TA)n Simple_repeat Simple_repeat 2 104 0 1972 139 10 3 chr17 51972396 51972691 -33465789 - AluSx SINE Alu -15 297 1 257 250 66 40 chr17 51972950 51973102 -33465378 + L1MEd LINE L1 2448 2603 -3937 2251 120 0 3 chr17 51973420 51973720 -33464760 - AluSx SINE Alu -12 300 2 194 259 74 25 chr17 51974994 51975075 -33463405 - L2 LINE L2 -38 3234 3150 421 319 61 41 chr17 51975148 51975469 -33463011 - L2 LINE L2 -193 3079 2743 428 275 111 12 chr17 51975469 51975640 -33462840 + MER5A DNA MER1_type 2 189 0 421 319 61 41 chr17 51975640 51975833 -33462647 - L2 LINE L2 -529 2743 2555 342 67 0 0 chr17 51976205 51976250 -33462230 + (CA)n Simple_repeat Simple_repeat 2 46 0 2635 85 28 0 chr17 51977463 51977817 -33460663 + THE1B LTR MaLR 1 364 0 433 290 71 30 chr17 51977889 51978058 -33460422 - MIR SINE MIR -70 192 17 817 273 120 43 chr17 51979248 51979665 -33458815 + MLT1K LTR MaLR 26 474 -114 * 1091 266 119 44 chr17 51979659 51980137 -33458343 - LTR33 LTR ERVL -7 514 1 316 156 78 67 chr17 51980151 51980241 -33458239 + MLT1K LTR MaLR 488 578 -10 342 285 114 0 chr17 51980283 51980406 -33458074 + L2 LINE L2 3168 3304 -9 236 250 40 13 chr17 51980877 51980953 -33457527 - MLT1K LTR MaLR -324 264 187 2313 193 23 34 chr17 51981258 51981786 -33456694 + Charlie1b DNA MER1_type 1 522 -1 382 309 42 30 chr17 51982018 51982186 -33456294 + MIR SINE MIR 85 254 -8 2379 53 3 3 chr17 51982294 51982608 -33455872 - AluY SINE Alu 0 314 1 225 0 0 0 chr17 51982789 51982814 -33455666 + (T)n Simple_repeat Simple_repeat 1 25 0 200 220 20 20 chr17 51983087 51983137 -33455343 + CT-rich Low_complexity Low_complexity 2 51 0 515 280 128 5 chr17 51983199 51983417 -33455063 + MIR SINE MIR 12 256 -6 28 29 0 0 chr17 51983542 51983577 -33454903 + AT_rich Low_complexity Low_complexity 1 35 0 1977 169 87 58 chr17 51983727 51984189 -33454291 + MLT1D LTR MaLR 1 475 -30 1555 122 0 0 chr17 51984190 51984395 -33454085 + AluSg/x SINE Alu 70 274 -36 221 0 0 33 chr17 51984400 51984430 -33454050 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 193 224 24 71 chr17 51984572 51984657 -33453823 + MIR3 SINE MIR 124 204 -4 258 313 143 18 chr17 51984731 51984843 -33453637 - L2 LINE L2 -5 3308 3183 916 240 80 9 chr17 51985329 51985554 -33452926 + MIR SINE MIR 21 261 -1 275 308 66 0 chr17 51985891 51985982 -33452498 + MIR SINE MIR 63 159 -103 1061 183 50 18 chr17 51986016 51986245 -33452235 - MLT1F1 LTR MaLR 0 583 348 * 2096 154 40 16 chr17 51986235 51986606 -33451874 - MLT1B LTR MaLR -7 383 4 626 229 71 104 chr17 51986608 51986888 -33451592 - MLT1F1 LTR MaLR -271 271 1 405 280 136 8 chr17 51986891 51987023 -33451457 - L2 LINE L2 0 3272 3124 4154 89 34 2 chr17 51987023 51987583 -33450897 + LTR19B LTR ERV1 1 578 -2 249 180 16 33 chr17 51988058 51988119 -33450361 - L1ME4a LINE L1 -3 6118 6059 1024 209 40 64 chr17 51988814 51989127 -33449353 - L1ME4a LINE L1 -517 5647 5353 688 295 87 62 chr17 51989127 51989248 -33449232 - L1M4 LINE L1 -3099 3283 3166 1634 199 3 22 chr17 51989248 51989564 -33448916 - AluJo SINE Alu -1 311 2 688 295 87 62 chr17 51989564 51989810 -33448670 - L1M4 LINE L1 -3216 3166 2928 2301 79 10 20 chr17 51989810 51990114 -33448366 + AluY SINE Alu 1 301 -10 688 295 87 62 chr17 51990114 51990778 -33447702 - L1M4 LINE L1 -3454 2928 2222 1500 205 149 35 chr17 51991295 51991777 -33446703 - LTR10A LTR ERV1 -60 549 13 4696 93 45 12 chr17 51991858 51992526 -33445954 + LTR8 LTR ERV1 1 690 -1 1007 189 84 5 chr17 51993404 51993693 -33444787 - L1MD3 LINE L1 -3 7992 7474 2111 104 6 44 chr17 51993837 51994155 -33444325 - AluSx SINE Alu -6 306 1 852 110 0 15 chr17 51994244 51994380 -33444100 - L1PB1 LINE L1 -3 6148 6015 300 279 86 64 chr17 51995158 51995298 -33443182 + MIR3 SINE MIR 59 201 -7 306 239 92 28 chr17 51995706 51995815 -33442665 + LTR67 LTR ERVL 422 537 -20 242 281 85 0 chr17 51995947 51996029 -33442451 + MIR SINE MIR 63 151 -111 569 221 50 7 chr17 51996246 51996386 -33442094 - MIR SINE MIR -30 232 87 320 329 114 7 chr17 51997146 51997295 -33441185 - MIR SINE MIR -69 193 29 676 232 98 0 chr17 51997598 51997762 -33440718 + MER20 DNA MER1_type 34 213 -6 217 308 34 17 chr17 51997775 51997892 -33440588 - MIR SINE MIR -57 151 33 2650 137 44 0 chr17 51997893 51998303 -33440177 - MSTC LTR MaLR 0 428 1 5297 136 13 6 chr17 52001110 52002314 -33436166 + L1PA14 LINE L1 4815 6028 -133 285 162 2 0 chr17 52002323 52002373 -33436107 - L1PA13 LINE L1 -79 6084 6034 1855 126 7 0 chr17 52002375 52002652 -33435828 - Tigger1 DNA MER2_type -478 1940 1662 760 133 23 8 chr17 52002662 52002790 -33435690 + L1PA13 LINE L1 6033 6162 -1 2613 151 16 76 chr17 52002931 52003416 -33435064 - LTR32 LTR ERVL -2 469 14 31508 110 19 59 chr17 52003652 52006292 -33432188 + L1PA7 LINE L1 10 2755 -3399 299 44 22 0 chr17 52006292 52006337 -33432143 + (CAA)n Simple_repeat Simple_repeat 1 46 0 31508 110 19 59 chr17 52006337 52007648 -33430832 + L1PA7 LINE L1 2755 4117 -2037 192 40 0 0 chr17 52007648 52007673 -33430807 + (CAA)n Simple_repeat Simple_repeat 3 27 0 31508 110 19 59 chr17 52007673 52010135 -33428345 + L1PA7 LINE L1 4117 6154 0 919 264 44 80 chr17 52010709 52010978 -33427502 - L1ME4a LINE L1 -60 6061 5821 1671 131 67 39 chr17 52010978 52011260 -33427220 - AluJo SINE Alu -22 290 1 919 264 44 80 chr17 52011260 52011540 -33426940 - L1ME4a LINE L1 -300 5821 5532 914 244 36 13 chr17 52011693 52011918 -33426562 - MIR SINE MIR -27 235 6 466 347 33 38 chr17 52012055 52012421 -33426059 - L2 LINE L2 -842 2472 2109 589 246 7 29 chr17 52012421 52012547 -33425933 - MER5B DNA MER1_type -1 177 53 312 27 0 0 chr17 52012547 52012584 -33425896 + (TG)n Simple_repeat Simple_repeat 1 37 0 589 246 7 29 chr17 52012584 52012595 -33425885 - MER5B DNA MER1_type -125 53 43 190 274 20 0 chr17 52012608 52012659 -33425821 + MER5B DNA MER1_type 115 166 -12 702 273 51 31 chr17 52012775 52013031 -33425449 - MIR SINE MIR 0 262 2 1679 159 25 4 chr17 52013488 52013764 -33424716 - AluJb SINE Alu -30 282 1 21 57 0 0 chr17 52014560 52014595 -33423885 + AT_rich Low_complexity Low_complexity 1 35 0 1087 168 48 16 chr17 52014643 52014844 -33423636 - MLT1A1 LTR MaLR -9 615 156 2001 119 3 23 chr17 52014860 52015194 -33423286 + AluSx SINE Alu 1 312 0 1113 165 25 15 chr17 52015220 52015420 -33423060 + MLT1A2 LTR MaLR 173 374 0 218 167 0 0 chr17 52015503 52015539 -33422941 + GA-rich Low_complexity Low_complexity 1 36 0 2390 83 0 32 chr17 52015814 52016128 -33422352 + AluSg1 SINE Alu 1 304 -5 632 318 119 13 chr17 52016623 52017177 -33421303 - L1M4 LINE L1 -1604 4542 3930 270 209 220 22 chr17 52017177 52017268 -33421212 + L2 LINE L2 3205 3313 0 263 376 0 0 chr17 52017478 52017563 -33420917 - L2 LINE L2 0 3272 3188 283 316 11 11 chr17 52017608 52017703 -33420777 - MIR3 SINE MIR -26 182 88 947 208 169 44 chr17 52018551 52019172 -33419308 + LTR50 LTR ERVL 1 795 0 805 187 60 7 chr17 52019533 52019683 -33418797 + FRAM SINE Alu 1 158 -8 352 179 36 24 chr17 52020872 52020956 -33417524 + MER5B DNA MER1_type 2 86 -92 2049 159 9 51 chr17 52020992 52021094 -33417386 + MLT1B LTR MaLR 4 109 -265 2609 62 0 0 chr17 52021094 52021399 -33417081 + AluY SINE Alu 1 305 -6 2049 159 9 51 chr17 52021399 52021480 -33417000 + MLT1B LTR MaLR 109 192 -182 2140 132 0 0 chr17 52021480 52021776 -33416704 + AluSx SINE Alu 1 296 -16 2049 159 9 51 chr17 52021776 52021993 -33416487 + MLT1B LTR MaLR 192 374 0 2522 141 13 5 chr17 52021994 52022376 -33416104 - LTR32 LTR ERVL 0 471 87 230 171 0 0 chr17 52022425 52022460 -33416020 - MER5B DNA MER1_type -134 44 10 240 315 86 31 chr17 52022632 52022794 -33415686 + L2 LINE L2 2846 3016 -256 282 338 97 14 chr17 52022943 52023088 -33415392 + MIR3 SINE MIR 36 192 -16 253 302 0 0 chr17 52023138 52023201 -33415279 + L2 LINE L2 3249 3311 -2 283 233 0 0 chr17 52023309 52023369 -33415111 - MIR3 SINE MIR -29 179 120 1090 224 128 36 chr17 52023950 52024033 -33414447 - L1ME2 LINE L1 -9 6155 6081 2052 148 3 3 chr17 52024033 52024336 -33414144 + AluJb SINE Alu 1 303 -9 1090 224 128 36 chr17 52024336 52024610 -33413870 - L1ME2 LINE L1 -83 6081 5765 23 0 0 0 chr17 52024620 52024643 -33413837 + AT_rich Low_complexity Low_complexity 1 23 0 2605 159 17 37 chr17 52024646 52025129 -33413351 + MER70B LTR ERVL 1 473 -105 2257 105 0 0 chr17 52025202 52025498 -33412982 - AluSc SINE Alu 0 309 14 4074 139 34 2 chr17 52025581 52025671 -33412809 + L1PA16 LINE L1 5341 5427 -739 2451 68 0 3 chr17 52025671 52025980 -33412500 + AluY SINE Alu 1 308 -3 4074 139 34 2 chr17 52025980 52026655 -33411825 + L1PA16 LINE L1 5427 6157 -9 1568 184 48 4 chr17 52026739 52027033 -33411447 + AluJb SINE Alu 1 306 0 815 97 16 16 chr17 52027482 52027606 -33410874 + FRAM SINE Alu 34 157 -19 426 214 96 38 chr17 52027735 52027872 -33410608 + MIR3 SINE MIR 43 184 -24 276 333 10 10 chr17 52028214 52028310 -33410170 + L2 LINE L2 3172 3267 -5 635 202 29 29 chr17 52028982 52029013 -33409467 - L1MB2 LINE L1 -7 6164 6135 1878 144 7 10 chr17 52029013 52029312 -33409168 + AluJo SINE Alu 5 302 -10 635 202 29 29 chr17 52029312 52029432 -33409048 - L1MB2 LINE L1 -36 6135 6016 180 229 29 0 chr17 52030154 52030189 -33408291 + MIR SINE MIR 112 147 -61 1062 151 0 0 chr17 52030196 52030355 -33408125 - AluJb SINE Alu -9 303 145 1829 173 92 3 chr17 52030426 52030784 -33407696 - MER93a LTR ERV1 -8 394 5 1964 155 27 59 chr17 52031168 52031261 -33407219 + LTR37A LTR ERV1 2 96 -330 2402 192 63 7 chr17 52031261 52031703 -33406777 + MLT1C LTR MaLR 1 467 0 1964 155 27 59 chr17 52031703 52032048 -33406432 + LTR37A LTR ERV1 96 426 0 28 29 0 0 chr17 52032079 52032114 -33406366 + AT_rich Low_complexity Low_complexity 1 35 0 322 335 146 21 chr17 52032193 52032426 -33406054 + L3 LINE CR1 1234 1495 -82 2207 100 13 7 chr17 52033386 52033696 -33404784 + AluSx SINE Alu 1 312 0 267 217 0 0 chr17 52034906 52034952 -33403528 + MIR SINE MIR 32 77 -131 594 279 41 0 chr17 52034977 52035149 -33403331 - MER117 DNA MER1_type -12 185 7 471 188 62 27 chr17 52036544 52036656 -33401824 - MER5B DNA MER1_type 0 178 63 251 28 28 0 chr17 52036656 52036692 -33401788 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 800 159 8 0 chr17 52036855 52036981 -33401499 + FLAM_C SINE Alu 2 128 -5 26 30 0 0 chr17 52036981 52037014 -33401466 + AT_rich Low_complexity Low_complexity 1 33 0 519 194 176 18 chr17 52037291 52037456 -33401024 - L1ME3 LINE L1 -4 6158 5968 * 3586 225 36 51 chr17 52037451 52038086 -33400394 - L1MDa LINE L1 -4729 1811 1168 491 172 247 0 chr17 52038086 52038179 -33400301 - FLAM_C SINE Alu -16 117 2 3586 225 36 51 chr17 52038179 52039093 -33399387 - L1MDa LINE L1 -5372 1168 53 703 224 38 147 chr17 52039109 52039488 -33398992 - L1MCa LINE L1 -4750 2372 1953 15046 27 0 0 chr17 52039488 52041915 -33396565 - L1PA2 LINE L1 -8 6147 3721 703 224 38 147 chr17 52041915 52042162 -33396318 - L1MCa LINE L1 -5169 1953 1873 2125 131 3 16 chr17 52042162 52042474 -33396006 - AluSx SINE Alu -2 310 3 703 224 38 147 chr17 52042474 52042751 -33395729 - L1MCa LINE L1 -5249 1873 1567 357 318 14 27 chr17 52042746 52042894 -33395586 - L1MCa LINE L1 -5116 1307 1162 * 417 167 0 0 chr17 52042978 52043038 -33395442 - Tigger1 DNA MER2_type -2 2416 2357 403 241 147 26 chr17 52043605 52043721 -33394759 + L2 LINE L2 3139 3268 -4 196 29 29 29 chr17 52044393 52044427 -33394053 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 381 161 0 0 chr17 52044427 52044505 -33393975 - L1PA16 LINE L1 -16 6140 6063 589 229 33 44 chr17 52044509 52044692 -33393788 + MER97c DNA MER1_type? 906 1086 -4 1318 91 74 128 chr17 52046311 52046607 -33391873 + L1MA7 LINE L1 6010 6289 -2 1836 151 0 23 chr17 52046976 52047275 -33391205 + AluJo SINE Alu 1 292 -20 2053 154 30 46 chr17 52047746 52047906 -33390574 + MLT1A1 LTR MaLR 1 162 -203 2089 121 3 20 chr17 52047906 52048212 -33390268 + AluSx SINE Alu 1 301 -11 2053 154 30 46 chr17 52048212 52048420 -33390060 + MLT1A1 LTR MaLR 162 363 -2 219 188 0 0 chr17 52048889 52048937 -33389543 + (TG)n Simple_repeat Simple_repeat 2 49 0 846 230 201 14 chr17 52049312 52049711 -33388769 - L2 LINE L2 -115 3198 2723 1030 256 147 48 chr17 52050091 52050595 -33387885 - LTR67 LTR ERVL 0 557 4 701 271 123 39 chr17 52050788 52051301 -33387179 - HAL1 LINE L1 0 2507 1952 3544 138 23 48 chr17 52051316 52051731 -33386749 - LTR26 LTR ERV1 0 603 208 2256 46 0 8 chr17 52051731 52051993 -33386487 - L1PA7 LINE L1 -3 6151 5892 3544 138 23 48 chr17 52051993 52052195 -33386285 - LTR26 LTR ERV1 -395 208 2 1916 233 99 41 chr17 52052240 52052841 -33385639 - HAL1 LINE L1 -591 1916 1264 1548 191 10 14 chr17 52052841 52053135 -33385345 - AluJo SINE Alu -9 303 11 1916 233 99 41 chr17 52053135 52053260 -33385220 - HAL1 LINE L1 -1243 1264 1148 677 288 122 39 chr17 52053291 52053833 -33384647 - HAL1 LINE L1 -1434 1073 487 334 299 48 72 chr17 52053932 52054099 -33384381 - HAL1 LINE L1 -2190 317 155 326 252 122 49 chr17 52054281 52054404 -33384076 + MER94 DNA DNA 2 133 -1 24 32 0 0 chr17 52054447 52054478 -33384002 + AT_rich Low_complexity Low_complexity 1 31 0 187 229 21 21 chr17 52055053 52055101 -33383379 - L2 LINE L2 -4 3309 3262 583 271 208 25 chr17 52056050 52056334 -33382146 - MLT1J2 LTR MaLR 0 450 115 227 209 0 0 chr17 52056331 52056374 -33382106 - MLT1J1 LTR MaLR -401 45 3 * 471 276 24 0 chr17 52057938 52058065 -33380415 + MIR SINE MIR 76 205 -57 466 247 0 0 chr17 52058077 52058174 -33380306 + L1MEd LINE L1 6 102 -6017 21 0 0 0 chr17 52058567 52058588 -33379892 + AT_rich Low_complexity Low_complexity 1 21 0 2673 136 49 49 chr17 52058592 52058715 -33379765 - L1PB4 LINE L1 -14 6142 6020 1943 127 0 71 chr17 52058715 52059037 -33379443 - AluJb SINE Alu -13 299 1 2673 136 49 49 chr17 52059037 52059407 -33379073 - L1PB4 LINE L1 -135 6021 5649 1186 94 0 0 chr17 52060228 52060387 -33378093 - L1P5 LINE L1 -471 5685 5527 * 1474 309 40 43 chr17 52060386 52061156 -33377324 + L1MEd LINE L1 245 1012 -5107 2981 153 43 0 chr17 52061295 52061786 -33376694 - L1MC1 LINE L1 -6 6327 5816 775 100 0 18 chr17 52061786 52061893 -33376587 - L1PA8 LINE L1 -2 6170 6063 317 198 167 42 chr17 52062977 52063073 -33375407 - MIR SINE MIR -61 147 40 379 296 57 49 chr17 52063209 52063300 -33375180 + MLT1J LTR MaLR 22 111 -400 216 0 0 0 chr17 52063300 52063324 -33375156 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 379 296 57 49 chr17 52063324 52063479 -33375001 + MLT1J LTR MaLR 111 270 -241 1974 116 0 0 chr17 52065605 52065863 -33372617 + AluSx SINE Alu 36 293 -19 366 321 102 23 chr17 52066149 52066364 -33372116 + L1M4 LINE L1 3264 3495 -2651 1446 172 72 4 chr17 52066800 52067050 -33371430 + AluJo SINE Alu 16 404 0 989 8 8 8 chr17 52067050 52067172 -33371308 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 201 310 52 0 chr17 52067598 52067656 -33370824 + MIR SINE MIR 87 147 -115 1168 146 5 10 chr17 52068435 52068634 -33369846 - L1PB1 LINE L1 -3 6148 5951 897 260 61 87 chr17 52068740 52069198 -33369282 - LTR16B LTR ERVL 0 464 19 3759 129 68 3 chr17 52069224 52069811 -33368669 + MER51A LTR ERV1 1 625 -9 370 280 65 16 chr17 52069834 52070020 -33368460 + MIR SINE MIR 68 262 0 21 57 0 0 chr17 52070277 52070312 -33368168 + AT_rich Low_complexity Low_complexity 1 35 0 5312 64 6 1 chr17 52070314 52070985 -33367495 - L1PA7 LINE L1 -4 6150 5477 1328 253 92 7 chr17 52070992 52071395 -33367085 - L1ME1 LINE L1 -6 6160 5724 184 108 0 81 chr17 52071397 52071434 -33367046 + L2 LINE L2 3261 3294 -19 1794 168 60 37 chr17 52072800 52073180 -33365300 + MLT1B LTR MaLR 1 389 -1 3341 81 5 5 chr17 52073267 52073711 -33364769 + L1PA11 LINE L1 5731 6174 0 260 184 28 46 chr17 52073877 52073986 -33364494 + (CAAA)n Simple_repeat Simple_repeat 2 108 0 677 237 61 38 chr17 52074435 52074878 -33363602 + L1ME4a LINE L1 5550 6120 -1 2250 129 3 0 chr17 52074913 52075223 -33363257 + AluSx SINE Alu 1 311 -1 767 208 57 0 chr17 52075568 52075727 -33362753 - MER5B DNA MER1_type -4 174 7 2360 97 3 3 chr17 52075841 52076150 -33362330 - AluSp SINE Alu -3 310 2 3688 179 62 44 chr17 52076591 52077134 -33361346 - MER21B LTR ERV1 -2 861 297 1668 77 0 5 chr17 52077134 52077356 -33361124 - L1PA6 LINE L1 0 6154 5934 3688 179 62 44 chr17 52077356 52077615 -33360865 - MER21B LTR ERV1 -566 297 44 533 156 0 0 chr17 52077616 52077693 -33360787 - MER21B LTR ERV1 -771 92 16 395 328 15 50 chr17 52078874 52079075 -33359405 - L2 LINE L2 -9 3263 3070 473 313 23 19 chr17 52079091 52079305 -33359175 - L2 LINE L2 -1395 1919 1705 457 296 23 23 chr17 52079315 52079447 -33359033 - L2 LINE L2 -5 3267 3136 9092 169 90 62 chr17 52079556 52079974 -33358506 - L1MC3 LINE L1 -164 7621 7216 277 238 10 37 chr17 52079974 52080071 -33358409 - MLT1F1 LTR MaLR -442 125 45 9092 169 90 62 chr17 52080071 52080881 -33357599 - L1MC3 LINE L1 -569 7216 6430 1529 198 63 29 chr17 52080881 52081264 -33357216 - MSTD LTR MaLR 0 396 1 9092 169 90 62 chr17 52081264 52081819 -33356661 - L1MC3 LINE L1 -1355 6430 5672 2039 176 83 45 chr17 52081819 52082313 -33356167 - MER67D LTR ERV1 0 514 2 9092 169 90 62 chr17 52082313 52082551 -33355929 - L1MC3 LINE L1 -2113 5672 5442 181 345 150 9 chr17 52082747 52082967 -33355513 - L2 LINE L2 -2588 726 476 198 326 94 43 chr17 52083002 52083140 -33355340 - L2 LINE L2 -2923 391 247 207 152 0 0 chr17 52083140 52083186 -33355294 + T-rich Low_complexity Low_complexity 1 46 0 1593 235 79 30 chr17 52083594 52084023 -33354457 + LTR16B LTR ERVL 15 464 0 530 260 144 0 chr17 52085559 52085767 -33352713 - MIR SINE MIR -6 256 19 950 256 61 24 chr17 52085811 52086268 -33352212 - L1ME4a LINE L1 -62 6059 5538 456 252 0 15 chr17 52086459 52086594 -33351886 - L1MB8 LINE L1 -6 6172 6040 6326 110 13 1 chr17 52086595 52087569 -33350911 + L1PB1 LINE L1 5162 6149 -2 2753 188 69 17 chr17 52087635 52088230 -33350250 - L1MB8 LINE L1 -182 6002 5377 260 284 26 0 chr17 52088234 52088350 -33350130 - HAL1b LINE L1 0 1348 1230 396 0 0 0 chr17 52088369 52088413 -33350067 + (TG)n Simple_repeat Simple_repeat 2 45 0 415 238 140 14 chr17 52088746 52088889 -33349591 + MIR SINE MIR 10 170 -92 910 208 204 17 chr17 52090134 52090345 -33348135 - MLT1F1 LTR MaLR -2 565 395 1166 196 47 116 chr17 52090345 52090503 -33347977 + MSTD LTR MaLR 2 169 -227 1946 108 52 0 chr17 52090503 52090771 -33347709 + AluSp SINE Alu 1 282 -31 1166 196 47 116 chr17 52090771 52091036 -33347444 + MSTD LTR MaLR 169 396 0 910 208 204 17 chr17 52091036 52091129 -33347351 - MLT1F1 LTR MaLR -172 395 177 287 194 60 15 chr17 52091172 52091239 -33347241 - MLT1F1 LTR MaLR -491 76 7 254 225 108 100 chr17 52091424 52091664 -33346816 - L1MB8 LINE L1 -1955 4191 3950 2210 112 0 13 chr17 52091961 52092264 -33346216 + AluSx SINE Alu 1 299 -13 489 203 216 0 chr17 52092672 52092820 -33345660 + MER5A DNA MER1_type 4 183 -6 428 175 87 29 chr17 52092830 52092900 -33345580 + MER5B DNA MER1_type 13 92 -86 947 181 71 33 chr17 52092900 52093110 -33345370 + MER20 DNA MER1_type 2 219 0 428 175 87 29 chr17 52093110 52093142 -33345338 + MER5B DNA MER1_type 92 121 -57 1616 174 46 26 chr17 52093176 52093481 -33344999 + AluJo SINE Alu 1 311 -1 362 278 61 2 chr17 52093523 52093665 -33344815 - MER5A DNA MER1_type -27 162 2 2345 105 129 5 chr17 52093697 52094078 -33344402 + MSTA LTR MaLR 1 428 0 2363 102 0 0 chr17 52094724 52095019 -33343461 - AluSg SINE Alu -15 295 1 1383 182 17 120 chr17 52095713 52096020 -33342460 - MLT1A1 LTR MaLR 0 365 109 2437 71 120 0 chr17 52096020 52096345 -33342135 + THE1B LTR MaLR 1 364 0 1383 182 17 120 chr17 52096345 52096444 -33342036 - MLT1A1 LTR MaLR -256 109 1 1692 189 36 36 chr17 52096604 52096991 -33341489 - MER96B DNA MER1_type? -1 416 30 1969 174 81 24 chr17 52097514 52097842 -33340638 - L1MB3 LINE L1 -7 6176 5813 2184 133 0 0 chr17 52097842 52098151 -33340329 - AluSx SINE Alu -3 309 1 1969 174 81 24 chr17 52098151 52098277 -33340203 - L1MB3 LINE L1 -370 5813 5696 761 32 0 0 chr17 52099868 52099961 -33338519 - L1PA7 LINE L1 -1 6153 6061 364 297 52 70 chr17 52100091 52100172 -33338308 + MIR SINE MIR 32 113 -149 2251 113 10 3 chr17 52100172 52100481 -33337999 - AluSx SINE Alu -1 311 1 364 297 52 70 chr17 52100481 52100628 -33337852 + MIR SINE MIR 113 256 -6 1564 293 144 37 chr17 52100928 52102289 -33336191 + L2 LINE L2 1564 3122 -191 2095 125 128 13 chr17 52102289 52102672 -33335808 + MSTA LTR MaLR 1 427 -1 1564 293 144 37 chr17 52102672 52102886 -33335594 + L2 LINE L2 3122 3312 -1 2232 120 7 0 chr17 52104061 52104361 -33334119 + AluSx SINE Alu 1 302 -10 2338 92 3 7 chr17 52105637 52105942 -33332538 - AluSg SINE Alu -6 304 1 3653 92 29 0 chr17 52105950 52106462 -33332018 - L1PA14 LINE L1 -17 6144 5618 334 264 120 0 chr17 52106487 52106612 -33331868 + MIR SINE MIR 14 153 -109 2133 130 7 10 chr17 52107930 52108230 -33330250 - AluSx SINE Alu -13 299 1 193 287 11 46 chr17 52108780 52108867 -33329613 - MIR SINE MIR -85 123 40 184 364 78 32 chr17 52108812 52109095 -33329385 - L2 LINE L2 -474 2840 2545 * 352 303 118 14 chr17 52109174 52109379 -33329101 + MIR SINE MIR 4 230 -32 523 178 198 8 chr17 52109579 52109760 -33328720 + MER33 DNA MER1_type 1 214 -103 309 297 28 21 chr17 52109806 52109951 -33328529 - MIR SINE MIR -14 248 103 541 144 22 0 chr17 52109963 52110053 -33328427 + MER33 DNA MER1_type 272 363 0 1452 219 52 15 chr17 52110061 52110145 -33328335 + MER58B DNA MER1_type 1 80 -2340 1459 167 9 103 chr17 52110145 52110352 -33328128 - AluJo SINE Alu -13 299 133 225 0 0 0 chr17 52110352 52110377 -33328103 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1459 167 9 103 chr17 52110377 52110499 -33327981 - AluJo SINE Alu -179 133 1 1452 219 52 15 chr17 52110499 52110743 -33327737 + MER58B DNA MER1_type 80 341 0 1378 98 0 0 chr17 52111367 52111541 -33326939 - AluSc SINE Alu -5 304 131 515 201 178 29 chr17 52111999 52112173 -33326307 + MER33 DNA MER1_type 13 212 -112 241 328 128 10 chr17 52113062 52113266 -33325214 - L2 LINE L2 -114 3199 2972 1948 117 3 38 chr17 52113456 52113746 -33324734 + AluSx SINE Alu 24 303 -9 1272 229 89 32 chr17 52113749 52114155 -33324325 - L1ME1 LINE L1 -31 6135 5707 522 287 51 47 chr17 52114159 52114434 -33324046 - L2 LINE L2 -562 2752 2477 596 220 19 91 chr17 52114507 52114716 -33323764 + HAL1b LINE L1 415 608 -740 367 288 26 100 chr17 52114717 52114988 -33323492 + HAL1b LINE L1 1098 1348 0 213 39 0 0 chr17 52115798 52115824 -33322656 + (TTA)n Simple_repeat Simple_repeat 2 27 0 614 106 64 0 chr17 52116155 52116249 -33322231 + L1MD3 LINE L1 7888 7987 -8 678 206 47 6 chr17 52116262 52116432 -33322048 + L1ME3A LINE L1 5989 6165 -5 787 176 17 57 chr17 52119112 52119286 -33319194 + MER20 DNA MER1_type 1 167 -52 3433 115 28 22 chr17 52119286 52119782 -33318698 - MER1A DNA MER1_type 0 529 31 386 250 38 0 chr17 52121541 52121621 -33316859 - MER81 DNA DNA -30 84 2 1722 230 92 43 chr17 52122001 52122131 -33316349 - L1MC4 LINE L1 -1 8041 7919 210 37 0 0 chr17 52122131 52122158 -33316322 + (CA)n Simple_repeat Simple_repeat 2 28 0 1722 230 92 43 chr17 52122158 52122722 -33315758 - L1MC4 LINE L1 -123 7919 7313 23 0 0 0 chr17 52122898 52122921 -33315559 + AT_rich Low_complexity Low_complexity 1 23 0 227 208 0 0 chr17 52122971 52123019 -33315461 + A-rich Low_complexity Low_complexity 1 48 0 1992 145 0 7 chr17 52124233 52124537 -33313943 + AluJo SINE Alu 1 302 -10 329 247 54 0 chr17 52124792 52124885 -33313595 - MIR SINE MIR -75 187 90 197 226 12 0 chr17 52125097 52125181 -33313299 + (TA)n Simple_repeat Simple_repeat 1 85 0 8094 32 13 0 chr17 52125266 52126959 -33311521 - L1PA4 LINE L1 0 6155 4447 5275 35 7 0 chr17 52126959 52127578 -33310902 + L1P LINE L1 3752 4374 -1772 1412 249 21 9 chr17 52127748 52128074 -33310406 + LTR16C LTR ERVL 149 478 -13 381 275 22 105 chr17 52128197 52128426 -33310054 + MLT1H LTR MaLR 259 468 -81 1094 250 44 67 chr17 52128604 52128802 -33309678 + MLT1H LTR MaLR 2 203 -346 2350 69 0 10 chr17 52128802 52129090 -33309390 + AluY SINE Alu 21 305 -6 1094 250 44 67 chr17 52129090 52129371 -33309109 + MLT1H LTR MaLR 203 470 -79 2874 126 26 2 chr17 52130341 52130771 -33307709 + L1MA4A LINE L1 5858 6297 -6 31791 110 19 57 chr17 52131387 52137802 -33300678 + L1PA7 LINE L1 12 6167 0 223 265 145 12 chr17 52137819 52137902 -33300578 - MER5B DNA MER1_type -84 94 1 504 77 0 245 chr17 52138030 52138173 -33300307 + MER50 LTR ERV1 497 604 -130 26 50 0 0 chr17 52138723 52138763 -33299717 + AT_rich Low_complexity Low_complexity 1 40 0 1999 187 64 0 chr17 52138770 52139113 -33299367 + MLT1A1 LTR MaLR 1 365 0 846 95 6 76 chr17 52139150 52139308 -33299172 + L1MA8 LINE L1 6070 6216 -75 294 29 0 0 chr17 52139328 52139363 -33299117 + (TG)n Simple_repeat Simple_repeat 2 36 0 519 261 42 0 chr17 52139363 52139482 -33298998 - MLT1A1 LTR MaLR -94 271 148 195 69 0 0 chr17 52139496 52139525 -33298955 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 3848 140 25 30 chr17 52139525 52140170 -33298310 - L1MA8 LINE L1 -39 6252 5607 2371 100 0 0 chr17 52140170 52140470 -33298010 - AluSg SINE Alu -10 300 1 3848 140 25 30 chr17 52140470 52140522 -33297958 - L1MA8 LINE L1 -684 5607 5556 2898 275 73 26 chr17 52140580 52141101 -33297379 + L2 LINE L2 80 575 -2739 2451 78 0 3 chr17 52141101 52141408 -33297072 + AluY SINE Alu 1 306 -5 2898 275 73 26 chr17 52141408 52141588 -33296892 + L2 LINE L2 575 745 -2569 996 208 40 5 chr17 52141588 52141790 -33296690 - MER3 DNA MER1_type 0 209 1 2898 275 73 26 chr17 52141790 52142190 -33296290 + L2 LINE L2 745 1234 -2080 759 245 81 36 chr17 52142191 52142550 -33295930 + L1M4 LINE L1 4397 4771 -1375 662 192 25 81 chr17 52142553 52142751 -33295729 + LTR41 LTR ERVL 1 187 -586 5528 91 8 11 chr17 52142986 52143747 -33294733 - L1PA12 LINE L1 -15 6153 5395 970 79 0 0 chr17 52143747 52143873 -33294607 + AluY SINE Alu 186 311 0 292 203 0 0 chr17 52143893 52143957 -33294523 + L2 LINE L2 646 709 -2605 1327 161 22 7 chr17 52143958 52144232 -33294248 - L1P LINE L1 -759 5387 5110 751 272 191 30 chr17 52144241 52144612 -33293868 + L2 LINE L2 2883 3313 0 831 296 140 22 chr17 52144822 52145367 -33293113 + L2 LINE L2 2702 3309 -4 2199 165 22 0 chr17 52145368 52145726 -33292754 - MER47A DNA MER2_type 0 366 1 21 36 0 0 chr17 52146124 52146152 -33292328 + AT_rich Low_complexity Low_complexity 1 28 0 543 294 83 14 chr17 52146551 52146769 -33291711 - MIR SINE MIR -4 258 26 365 318 98 58 chr17 52147086 52147360 -33291120 - L2 LINE L2 -346 2968 2684 1919 153 0 10 chr17 52148299 52148600 -33289880 + AluJo SINE Alu 1 298 -14 220 250 19 0 chr17 52148650 52148702 -33289778 + MIR SINE MIR 83 135 -73 1602 229 63 69 chr17 52148925 52149432 -33289048 + MLT1D LTR MaLR 1 504 -1 381 216 0 0 chr17 52149679 52149767 -33288713 + CT-rich Low_complexity Low_complexity 4 91 0 297 184 0 0 chr17 52150377 52150426 -33288054 - MIR SINE MIR -65 143 95 2256 156 19 57 chr17 52151969 52152331 -33286149 - MER57A LTR ERV1 -1 402 28 1583 166 0 0 chr17 52152331 52152572 -33285908 + AluJb SINE Alu 41 281 -31 1699 83 0 19 chr17 52152572 52152787 -33285693 - AluSg/x SINE Alu -16 296 85 2256 156 19 57 chr17 52152787 52152841 -33285639 - MER57A LTR ERV1 -373 30 1 829 237 111 0 chr17 52152862 52153052 -33285428 - MER58A DNA MER1_type -3 221 11 232 375 23 31 chr17 52153309 52153335 -33285145 + MIR SINE MIR 20 45 -163 1982 75 4 8 chr17 52153335 52153589 -33284891 - L1PA7 LINE L1 0 6154 5902 232 375 23 31 chr17 52153589 52153690 -33284790 + MIR SINE MIR 45 146 -62 4266 163 6 0 chr17 52154255 52154910 -33283570 - MER72 LTR ERV1 -4 718 60 2392 132 66 15 chr17 52154929 52155323 -33283157 + MSTA LTR MaLR 3 416 -12 9179 171 36 16 chr17 52155335 52156941 -33281539 + MSTA-int LTR MaLR 1 1639 -12 3163 135 51 9 chr17 52156973 52157548 -33280932 + MER4B LTR ERV1 13 779 0 227 108 0 0 chr17 52157549 52157586 -33280894 + MSTA-int LTR MaLR 1543 1579 -1 2041 162 118 8 chr17 52157594 52157976 -33280504 + MSTA LTR MaLR 5 428 0 2757 133 42 5 chr17 52157976 52158403 -33280077 - MER65A LTR ERV1 -2 443 1 316 254 145 7 chr17 52158405 52158543 -33279937 + MIR SINE MIR 79 235 -27 384 295 14 27 chr17 52158866 52159025 -33279455 + MER21B LTR ERV1 1 196 -409 * 1866 223 48 36 chr17 52159000 52159602 -33278878 + MER21B LTR ERV1 98 756 -107 9607 119 27 8 chr17 52159893 52161330 -33277150 - Tigger4(Zombi) DNA MER2_type 0 2731 1268 1291 201 70 11 chr17 52161330 52161603 -33276877 + MER87 LTR ERV1 1 289 -252 540 314 7 0 chr17 52161692 52161845 -33276635 + MER117 DNA MER1_type 7 160 -37 985 261 60 73 chr17 52162003 52162635 -33275845 + L1MC4a LINE L1 5258 5881 -1927 207 70 47 23 chr17 52162644 52162687 -33275793 + (TA)n Simple_repeat Simple_repeat 2 45 0 743 230 80 30 chr17 52163786 52163986 -33274494 + MER63A DNA MER1_type 1 210 0 238 267 50 0 chr17 52164160 52164220 -33274260 - MIR SINE MIR -110 152 90 231 315 65 60 chr17 52164508 52164692 -33273788 - MIR SINE MIR -70 192 8 245 259 94 12 chr17 52165490 52165575 -33272905 + MIR3 SINE MIR 81 172 -36 862 211 74 0 chr17 52165591 52165766 -33272714 - MER58A DNA MER1_type -1 223 36 303 339 115 11 chr17 52165813 52165987 -33272493 + MIR SINE MIR 50 241 -21 891 163 0 15 chr17 52166244 52166379 -33272101 + FLAM_C SINE Alu 1 133 0 442 272 136 6 chr17 52166704 52166866 -33271614 + MIR SINE MIR 5 187 -75 363 338 136 31 chr17 52167104 52167610 -33270870 - L2 LINE L2 0 3272 2722 308 176 0 14 chr17 52168219 52168293 -33270187 + GA-rich Low_complexity Low_complexity 4 76 0 314 333 45 0 chr17 52168391 52168502 -33269978 - MIR3 SINE MIR -51 157 42 808 266 94 22 chr17 52168716 52169035 -33269445 - LTR33 LTR ERVL -178 343 2 288 306 146 0 chr17 52169453 52169597 -33268883 + L2 LINE L2 3149 3313 0 207 200 0 22 chr17 52169598 52169643 -33268837 + (TGAA)n Simple_repeat Simple_repeat 3 46 0 525 301 20 15 chr17 52169757 52169956 -33268524 + MLT1J2 LTR MaLR 37 236 -214 822 215 23 6 chr17 52169985 52170162 -33268318 + MLT2B3 LTR ERVL 1 180 -374 298 143 0 0 chr17 52170162 52170204 -33268276 - Ricksha DNA DNA -1537 509 468 379 199 48 14 chr17 52170204 52170350 -33268130 + CT-rich Low_complexity Low_complexity 4 154 0 963 139 0 0 chr17 52170464 52170541 -33267939 + (G)n Simple_repeat Simple_repeat 1 257 0 963 139 0 0 chr17 52170541 52170721 -33267759 + (G)n Simple_repeat Simple_repeat 1 180 0 654 192 4 23 chr17 52170835 52171097 -33267383 + CT-rich Low_complexity Low_complexity 1 256 0 304 120 40 0 chr17 52171120 52171170 -33267310 + MLT2B3 LTR ERVL 503 554 0 396 213 128 64 chr17 52171207 52171348 -33267132 + MLT1J2 LTR MaLR 287 436 -14 364 241 82 44 chr17 52171574 52171732 -33266748 - MIR SINE MIR -22 240 77 271 252 56 47 chr17 52171946 52172053 -33266427 - MIR SINE MIR -56 152 45 387 328 15 30 chr17 52173263 52173464 -33265016 + MIR SINE MIR 50 247 -15 2195 125 3 0 chr17 52173678 52173975 -33264505 + AluSx SINE Alu 1 298 -14 2625 184 45 10 chr17 52173975 52174485 -33263995 - L1MB5 LINE L1 -3 6171 5644 473 311 14 0 chr17 52174594 52174742 -33263738 + MIR SINE MIR 65 214 -48 187 262 16 33 chr17 52175501 52175562 -33262918 + L2 LINE L2 2905 2964 -350 229 329 255 7 chr17 52175715 52175864 -33262616 - MER91A DNA MER1_type -3 193 8 194 289 155 10 chr17 52175959 52176056 -33262424 + L2 LINE L2 3139 3249 -23 230 167 0 0 chr17 52176482 52176524 -33261956 + L2 LINE L2 3223 3264 -8 1221 152 67 13 chr17 52176971 52177195 -33261285 + MER46A DNA MER2_type 1 236 0 211 185 31 46 chr17 52177450 52177515 -33260965 - MER5B DNA MER1_type -46 132 69 2111 173 26 3 chr17 52177547 52177899 -33260581 - MLT1A1 LTR MaLR 0 365 6 1928 159 3 3 chr17 52177899 52178201 -33260279 + AluJo SINE Alu 1 302 -10 231 307 0 0 chr17 52179574 52179649 -33258831 - L2 LINE L2 -661 2653 2579 570 279 7 0 chr17 52180135 52180282 -33258198 - MER5B DNA MER1_type -2 176 29 22 70 0 0 chr17 52180282 52180325 -33258155 + AT_rich Low_complexity Low_complexity 1 43 0 1910 206 27 29 chr17 52180371 52180813 -33257667 - L1MA10 LINE L1 -24 6310 5870 3561 125 22 22 chr17 52180818 52181264 -33257216 + L1MA9 LINE L1 5283 5731 -581 20795 30 3 0 chr17 52181264 52184487 -33253993 + L1PA3 LINE L1 2920 6155 0 3561 125 22 22 chr17 52184487 52184633 -33253847 + L1MA9 LINE L1 5730 5875 -437 774 192 99 0 chr17 52184704 52184876 -33253604 - MER5A DNA MER1_type 0 189 1 360 368 16 6 chr17 52184893 52185075 -33253405 + MIR SINE MIR 61 244 -18 1754 132 0 16 chr17 52185570 52185821 -33252659 - AluSx SINE Alu -17 295 49 184 222 0 0 chr17 52185880 52185916 -33252564 - MIR SINE MIR -59 149 114 538 51 19 0 chr17 52186086 52186173 -33252307 - L1M3 LINE L1 -831 5460 5395 298 272 70 0 chr17 52186595 52186753 -33251727 - MIR3 SINE MIR -16 192 24 293 206 213 50 chr17 52186949 52187109 -33251371 - MIR SINE MIR -12 250 65 270 215 0 0 chr17 52188771 52188850 -33249630 + (TG)n Simple_repeat Simple_repeat 1 79 0 809 164 55 101 chr17 52189230 52189449 -33249031 - MER3 DNA MER1_type 0 209 1 946 231 52 0 chr17 52189458 52189670 -33248810 + MER58A DNA MER1_type 2 224 0 242 308 87 10 chr17 52190074 52190178 -33248302 - MIR SINE MIR -75 133 22 186 43 0 0 chr17 52190671 52190694 -33247786 + (TCCA)n Simple_repeat Simple_repeat 1 23 0 186 103 0 0 chr17 52190693 52190722 -33247758 + (CCTA)n Simple_repeat Simple_repeat 1 29 0 325 336 42 0 chr17 52191298 52191441 -33247039 + MIR3 SINE MIR 60 208 0 203 325 104 18 chr17 52191939 52192102 -33246378 - MIR3 SINE MIR -9 199 23 340 270 22 22 chr17 52192148 52192285 -33246195 - MER103 DNA DNA -10 156 20 2439 158 19 42 chr17 52192448 52192676 -33245804 + MLT1C LTR MaLR 4 217 -250 2429 93 0 3 chr17 52192676 52192977 -33245503 + AluSx SINE Alu 1 300 -12 2439 158 19 42 chr17 52192977 52193223 -33245257 + MLT1C LTR MaLR 217 467 0 198 0 0 0 chr17 52193513 52193535 -33244945 + (CATA)n Simple_repeat Simple_repeat 4 25 0 231 193 0 0 chr17 52193535 52193592 -33244888 - L1MC4 LINE L1 -1339 6703 6647 1162 270 50 26 chr17 52193609 52193950 -33244530 - MLT1I LTR MaLR -2 407 59 369 0 0 0 chr17 52194221 52194262 -33244218 + (TG)n Simple_repeat Simple_repeat 2 42 0 384 329 36 40 chr17 52194571 52194845 -33243635 + L2 LINE L2 1979 2251 -1063 379 279 0 29 chr17 52195161 52195265 -33243215 - MIR SINE MIR -78 130 30 441 210 108 57 chr17 52195271 52195447 -33243033 - L2 LINE L2 0 3313 3129 218 358 28 22 chr17 52196416 52196595 -33241885 - L2 LINE L2 -448 2866 2687 415 335 52 9 chr17 52197192 52197404 -33241076 + MIR SINE MIR 10 230 -32 285 324 124 31 chr17 52197446 52197671 -33240809 + L2 LINE L2 3027 3272 0 352 36 18 18 chr17 52198576 52198631 -33239849 + (TC)n Simple_repeat Simple_repeat 1 55 0 2216 131 0 0 chr17 52200086 52200392 -33238088 - AluSx SINE Alu -6 306 1 342 314 101 16 chr17 52201254 52201442 -33237038 - MIR SINE MIR -11 251 48 1495 213 94 61 chr17 52201883 52202250 -33236230 + L2 LINE L2 2148 2543 -771 2362 85 10 0 chr17 52202250 52202545 -33235935 - AluSg SINE Alu -12 298 1 1495 213 94 61 chr17 52202545 52202764 -33235716 + L2 LINE L2 2543 2753 -561 292 219 148 69 chr17 52203310 52203510 -33234970 + MLT1H LTR MaLR 90 316 -93 358 291 67 24 chr17 52203614 52203779 -33234701 + MIR SINE MIR 76 247 -15 191 173 0 62 chr17 52204858 52204939 -33233541 + CT-rich Low_complexity Low_complexity 1 76 0 262 309 41 0 chr17 52205461 52205558 -33232922 + L2 LINE L2 3172 3272 0 188 313 179 8 chr17 52205780 52205914 -33232566 - MIR3 SINE MIR -15 193 37 292 273 170 18 chr17 52206774 52206939 -33231541 - L2 LINE L2 0 3313 3124 246 324 95 6 chr17 52207070 52207249 -33231231 - L2 LINE L2 -340 2974 2780 330 129 0 0 chr17 52207403 52207465 -33231015 + (CAGC)n Simple_repeat Simple_repeat 1 62 0 209 293 0 17 chr17 52207468 52207526 -33230954 - L2 LINE L2 -12 3301 3245 25 83 0 0 chr17 52210344 52210404 -33228076 + AT_rich Low_complexity Low_complexity 1 60 0 22 35 0 0 chr17 52211792 52211821 -33226659 + AT_rich Low_complexity Low_complexity 1 29 0 2370 88 0 0 chr17 52212008 52212305 -33226175 - AluY SINE Alu -14 297 1 281 307 61 22 chr17 52212546 52212777 -33225703 - L1MC4a LINE L1 -1913 5895 5656 299 321 67 8 chr17 52212975 52213109 -33225371 - MER5B DNA MER1_type 0 178 37 499 229 163 13 chr17 52214114 52214267 -33224213 + MER5A DNA MER1_type 14 189 0 180 150 75 0 chr17 52215691 52215731 -33222749 - L2 LINE L2 0 3313 3271 272 319 58 27 chr17 52215858 52216046 -33222434 - L2 LINE L2 -205 3108 2915 406 298 46 8 chr17 52216086 52216217 -33222263 - L2 LINE L2 -493 2821 2686 2879 154 38 24 chr17 52216456 52216961 -33221519 + MLT2B2 LTR ERVL 1 512 -3 241 307 107 0 chr17 52217098 52217238 -33221242 - MIR SINE MIR -1 261 107 285 210 50 76 chr17 52217449 52217568 -33220912 - MIR3 SINE MIR -11 197 82 209 352 75 59 chr17 52218396 52218703 -33219777 + L2 LINE L2 2960 3271 -1 260 273 49 56 chr17 52218897 52219040 -33219440 + MIR SINE MIR 121 262 0 948 225 41 14 chr17 52219274 52219492 -33218988 - MER58A DNA MER1_type 0 224 1 288 246 0 0 chr17 52219825 52219890 -33218590 - MIR SINE MIR -131 131 67 232 210 30 174 chr17 52220983 52221150 -33217330 + MIR SINE MIR 108 250 -12 376 257 60 68 chr17 52221718 52221967 -33216513 + L1M4 LINE L1 3698 3944 -2202 383 323 8 8 chr17 52222750 52222883 -33215597 + MIR SINE MIR 19 151 -57 1749 167 104 13 chr17 52222973 52223291 -33215189 - MER7A DNA MER2_type -1 345 1 243 234 62 0 chr17 52223560 52223624 -33214856 - L2 LINE L2 0 3272 3205 303 304 56 8 chr17 52224748 52224873 -33213607 - MER20B DNA MER1_type -597 186 56 203 323 32 11 chr17 52225887 52225980 -33212500 - MIR SINE MIR -80 128 34 4040 112 72 52 chr17 52226046 52227302 -33211178 + pTR5 LTR ERV1 741 2468 0 2050 146 62 6 chr17 52227302 52227638 -33210842 + THE1B LTR MaLR 3 357 -7 590 295 31 0 chr17 52227667 52227860 -33210620 - MIR SINE MIR -1 261 63 435 239 66 24 chr17 52228157 52228324 -33210156 - MIR SINE MIR -10 252 79 2515 78 0 0 chr17 52228845 52229152 -33209328 - AluY SINE Alu -4 307 1 425 294 102 6 chr17 52229422 52229599 -33208881 + MIR SINE MIR 54 247 -15 541 269 23 82 chr17 52229846 52230103 -33208377 - MIR SINE MIR -6 256 15 286 346 47 51 chr17 52230806 52231320 -33207160 + L2 LINE L2 2327 2838 -476 307 341 73 47 chr17 52231366 52231709 -33206771 + L2 LINE L2 2919 3270 -2 2191 107 38 0 chr17 52232726 52233015 -33205465 + AluSx SINE Alu 1 300 -12 1277 110 0 0 chr17 52233015 52233188 -33205292 + AluSg/x SINE Alu 134 306 -6 435 113 0 88 chr17 52233226 52233306 -33205174 + MADE1 DNA Mariner 1 73 -7 770 174 22 3 chr17 52233503 52233660 -33204820 - L1MC/D LINE L1 -470 5704 5570 742 162 19 7 chr17 52233867 52234021 -33204459 + MER5A DNA MER1_type 28 183 -6 204 253 27 53 chr17 52234486 52234561 -33203919 + MIR SINE MIR 3 75 -187 2613 106 59 10 chr17 52234624 52235030 -33203450 + MSTA LTR MaLR 1 426 -2 2797 146 73 26 chr17 52235260 52235807 -33202673 + L1MB5 LINE L1 5572 6144 -30 25 31 0 0 chr17 52235811 52235843 -33202637 + AT_rich Low_complexity Low_complexity 1 32 0 296 297 9 36 chr17 52236587 52236698 -33201782 - MER5A DNA MER1_type -9 180 73 2503 71 0 7 chr17 52236701 52237009 -33201471 - AluY SINE Alu -5 306 1 972 117 0 0 chr17 52237011 52237139 -33201341 - AluSc SINE Alu -14 295 168 1617 169 51 39 chr17 52237240 52237571 -33200909 + MER58B DNA MER1_type 7 341 0 287 254 45 124 chr17 52237979 52238156 -33200324 + MER20B DNA MER1_type 1 163 -620 340 296 132 11 chr17 52238529 52238718 -33199762 + MIR SINE MIR 9 220 -42 1221 153 43 10 chr17 52238889 52239098 -33199382 - MER20 DNA MER1_type -3 216 1 1351 163 48 8 chr17 52239130 52239382 -33199098 - L1PB4 LINE L1 -2 6154 5893 190 271 102 0 chr17 52239511 52239570 -33198910 - L2 LINE L2 -40 3232 3168 226 317 20 20 chr17 52240261 52240362 -33198118 - MIR SINE MIR -8 254 154 * 260 318 29 24 chr17 52240361 52240531 -33197949 - MER5B DNA MER1_type -6 172 2 286 324 20 20 chr17 52240380 52240528 -33197952 + MER5A DNA MER1_type 37 184 -5 436 288 9 71 chr17 52240726 52240938 -33197542 + MIR SINE MIR 14 212 -50 2016 175 110 17 chr17 52241390 52241852 -33196628 + MLT1D LTR MaLR 1 505 0 381 257 32 83 chr17 52243355 52243433 -33195047 + L2 LINE L2 2059 2139 -1175 2301 115 28 28 chr17 52243433 52243797 -33194683 + THE1B LTR MaLR 1 364 0 381 257 32 83 chr17 52243797 52243936 -33194544 + L2 LINE L2 2139 2265 -1049 562 238 81 12 chr17 52243954 52244114 -33194366 + MER5B DNA MER1_type 1 171 -7 * 609 312 156 16 chr17 52244113 52244619 -33193861 + L2 LINE L2 2285 2861 -453 619 216 7 39 chr17 52244797 52244937 -33193543 + L2 LINE L2 3165 3301 -12 225 0 0 0 chr17 52244937 52244962 -33193518 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 619 216 7 39 chr17 52244962 52244974 -33193506 + L2 LINE L2 3301 3312 -1 2529 213 44 6 chr17 52245305 52245827 -33192653 + MLT1F LTR MaLR 1 542 0 354 282 55 0 chr17 52245913 52246023 -33192457 + MIR SINE MIR 102 217 -45 591 270 147 5 chr17 52246326 52246537 -33191943 - MIR SINE MIR -7 255 15 304 261 59 50 chr17 52246723 52246842 -33191638 - MIR SINE MIR -123 139 20 5362 183 79 27 chr17 52247240 52247401 -33191079 - L1MA8 LINE L1 -5 6286 6135 2316 101 0 3 chr17 52247401 52247697 -33190783 - AluSx SINE Alu -17 295 1 5362 183 79 27 chr17 52247697 52247898 -33190582 - L1MA8 LINE L1 -156 6135 5946 2633 113 6 3 chr17 52247898 52248261 -33190219 + THE1B LTR MaLR 1 364 0 5362 183 79 27 chr17 52248261 52249785 -33188695 - L1MA8 LINE L1 -345 5946 4255 677 44 0 11 chr17 52249785 52249875 -33188605 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 5362 183 79 27 chr17 52249875 52250075 -33188405 - L1MA8 LINE L1 -2036 4255 4067 928 228 35 13 chr17 52250052 52250280 -33188200 - L1MC2 LINE L1 -493 5851 5619 * 9976 187 40 16 chr17 52250801 52251371 -33187109 - L1PA16 LINE L1 -9 6157 5602 2343 113 3 0 chr17 52251371 52251673 -33186807 + AluSp SINE Alu 1 303 -10 9976 187 40 16 chr17 52251673 52254262 -33184218 - L1PA16 LINE L1 -564 5602 2921 408 141 147 122 chr17 52254263 52254419 -33184061 + L1 LINE L1 5086 5245 -901 349 239 65 11 chr17 52254602 52254694 -33183786 + MIR SINE MIR 92 188 -74 1152 302 42 18 chr17 52254703 52255200 -33183280 + L2 LINE L2 2804 3312 -1 230 265 12 36 chr17 52255193 52255276 -33183204 + MIR SINE MIR 182 262 0 * 183 80 0 0 chr17 52255606 52255631 -33182849 + (CTG)n Simple_repeat Simple_repeat 2 26 0 3583 158 72 20 chr17 52255860 52256487 -33181993 - L1MA9 LINE L1 0 6312 5642 2343 96 0 7 chr17 52256487 52256788 -33181692 + AluSq SINE Alu 1 299 -14 3583 158 72 20 chr17 52256788 52256867 -33181613 - L1MA9 LINE L1 -670 5642 5569 880 256 107 36 chr17 52257641 52258074 -33180406 + L2 LINE L2 2601 3055 -217 2223 98 21 21 chr17 52258214 52258541 -33179939 + L1PA10 LINE L1 5841 6167 -1 1779 173 49 16 chr17 52258554 52258919 -33179561 - MLT1C LTR MaLR -90 377 1 23 0 0 0 chr17 52258924 52258947 -33179533 + AT_rich Low_complexity Low_complexity 1 23 0 470 311 66 9 chr17 52259584 52259796 -33178684 - MIR SINE MIR -11 251 28 514 305 122 32 chr17 52260026 52260468 -33178012 + LTR33 LTR ERVL 26 507 -14 281 305 2 10 chr17 52260483 52260601 -33177879 - MIR SINE MIR -63 145 36 180 310 35 23 chr17 52261145 52261232 -33177248 + L3b LINE CR1 1168 1255 -328 500 206 7 0 chr17 52261547 52261683 -33176797 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 446 281 38 27 chr17 52261791 52261983 -33176497 + MIR3 SINE MIR 11 204 -4 235 264 39 93 chr17 52262031 52262130 -33176350 + L2 LINE L2 2616 2702 -612 2145 118 9 19 chr17 52262130 52262445 -33176035 + AluSx SINE Alu 1 312 0 235 264 39 93 chr17 52262445 52262527 -33175953 + L2 LINE L2 2702 2787 -527 280 331 48 8 chr17 52262849 52262973 -33175507 + L2 LINE L2 3180 3308 -5 391 302 126 14 chr17 52263456 52263671 -33174809 + MIR SINE MIR 4 242 -20 1199 275 100 28 chr17 52263820 52264622 -33173858 + L2 LINE L2 2462 3313 0 297 0 0 0 chr17 52265120 52265153 -33173327 + (TG)n Simple_repeat Simple_repeat 2 34 0 1958 172 49 33 chr17 52265999 52266545 -33171935 + MLT2A2 LTR ERVL 1 554 0 210 171 0 0 chr17 52266563 52266604 -33171876 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 802 283 75 55 chr17 52266611 52266929 -33171551 - L2 LINE L2 -6 3307 2976 378 231 210 7 chr17 52266929 52267072 -33171408 - MER5B DNA MER1_type -3 175 4 802 283 75 55 chr17 52267072 52267223 -33171257 - L2 LINE L2 -337 2976 2829 207 0 0 0 chr17 52268370 52268393 -33170087 + (T)n Simple_repeat Simple_repeat 1 23 0 869 254 74 60 chr17 52268998 52269428 -33169052 - LTR16A1 LTR ERVL 0 457 22 273 286 61 0 chr17 52269778 52269876 -33168604 + MIR SINE MIR 111 214 -48 229 263 64 88 chr17 52271063 52271234 -33167246 + MLT1K LTR MaLR 5 171 -417 249 221 63 53 chr17 52271384 52271479 -33167001 + LTR67 LTR ERVL 457 552 -5 355 301 75 52 chr17 52271688 52271901 -33166579 + MIR SINE MIR 10 227 -35 2735 43 31 0 chr17 52272492 52272816 -33165664 + L1PA4 LINE L1 5819 6152 -3 2038 104 3 90 chr17 52272886 52273144 -33165336 - L1MA1 LINE L1 -4 6298 6078 2298 95 3 0 chr17 52273144 52273438 -33165042 - AluSx SINE Alu -17 295 1 2038 104 3 90 chr17 52273438 52273535 -33164945 - L1MA1 LINE L1 -224 6078 5974 513 151 0 94 chr17 52274482 52274588 -33163892 + MER21B LTR ERV1 12 107 -756 622 172 35 9 chr17 52274661 52274777 -33163703 + MER21B LTR ERV1 21 139 -724 1045 121 121 0 chr17 52274815 52274988 -33163492 + L1P5 LINE L1 5598 5791 -360 305 250 48 0 chr17 52274989 52275073 -33163407 + L1MC4 LINE L1 6614 6701 -1341 246 174 0 0 chr17 52275077 52275123 -33163357 + (TA)n Simple_repeat Simple_repeat 2 47 0 2267 130 24 16 chr17 52275123 52275139 -33163341 + L1PB1 LINE L1 5776 5790 -361 1023 156 0 0 chr17 52275139 52275318 -33163162 + (TA)n Simple_repeat Simple_repeat 2 180 0 2267 130 24 16 chr17 52275318 52275670 -33162810 + L1PB1 LINE L1 5790 6147 -4 186 43 0 0 chr17 52275727 52275750 -33162730 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3015 172 143 25 chr17 52275752 52276361 -33162119 + MER21B LTR ERV1 181 861 -2 230 263 35 0 chr17 52276884 52276941 -33161539 + L2 LINE L2 3207 3265 -7 1538 185 26 16 chr17 52277054 52277357 -33161123 + AluJo SINE Alu 1 306 -6 1282 253 55 101 chr17 52277820 52277966 -33160514 + MER21B LTR ERV1 98 249 -614 2973 134 71 10 chr17 52277966 52278488 -33159992 + L1MA7 LINE L1 5737 6290 -1 2184 108 0 7 chr17 52278496 52278793 -33159687 + AluSx SINE Alu 1 295 -17 1851 142 45 7 chr17 52278794 52279083 -33159397 - AluSx SINE Alu -12 300 1 1282 253 55 101 chr17 52279083 52279610 -33158870 + MER21B LTR ERV1 255 751 -112 21 36 0 0 chr17 52279618 52279646 -33158834 + AT_rich Low_complexity Low_complexity 1 28 0 216 305 17 59 chr17 52280059 52280177 -33158303 - MIR SINE MIR -41 221 109 534 296 70 12 chr17 52280192 52280364 -33158116 - MIR3 SINE MIR -7 201 20 310 327 137 39 chr17 52282384 52282589 -33155891 - MIR SINE MIR -16 246 22 242 178 0 44 chr17 52283273 52283318 -33155162 - L2 LINE L2 -18 3295 3253 342 285 22 36 chr17 52283457 52283594 -33154886 - L2 LINE L2 -211 3061 2927 1564 149 11 25 chr17 52283748 52284030 -33154450 + L1MA8 LINE L1 6009 6286 -5 24 0 0 0 chr17 52284030 52284054 -33154426 + AT_rich Low_complexity Low_complexity 1 24 0 462 258 133 20 chr17 52284244 52284395 -33154085 - MIR3 SINE MIR -14 194 27 392 271 103 9 chr17 52285188 52285295 -33153185 - L2 LINE L2 -4 3309 3193 1681 168 17 27 chr17 52285346 52285638 -33152842 - AluJo SINE Alu -23 289 1 2691 185 66 0 chr17 52285638 52286185 -33152295 - L1MD3 LINE L1 -2 7993 7411 324 164 0 45 chr17 52286185 52286252 -33152228 - MLT1F1 LTR MaLR -442 125 62 253 319 129 9 chr17 52286382 52286498 -33151982 - L2 LINE L2 -280 3033 2904 * 481 247 200 8 chr17 52286491 52286774 -33151706 + L2 LINE L2 2706 3040 -273 198 118 0 0 chr17 52286808 52286842 -33151638 + (CA)n Simple_repeat Simple_repeat 1 34 0 483 227 76 17 chr17 52287383 52287502 -33150978 - MIR SINE MIR -98 164 39 287 290 89 8 chr17 52287600 52287724 -33150756 + L2 LINE L2 3180 3313 0 2320 102 0 0 chr17 52288545 52288838 -33149642 + AluSc SINE Alu 1 293 -16 180 0 0 0 chr17 52289102 52289122 -33149358 + (A)n Simple_repeat Simple_repeat 1 20 0 1736 144 12 0 chr17 52289123 52289393 -33149087 - AluSx SINE Alu 0 303 31 435 253 106 35 chr17 52289394 52289564 -33148916 - MIR SINE MIR -28 234 53 321 289 13 0 chr17 52291784 52291860 -33146620 - MIR3 SINE MIR -50 158 82 345 237 58 93 chr17 52291863 52292002 -33146478 + MER94 DNA DNA 1 134 0 725 132 68 142 chr17 52292225 52292415 -33146065 - MSTD LTR MaLR 0 396 221 2303 141 30 15 chr17 52292601 52292999 -33145481 + L1PA16 LINE L1 5759 6157 -9 282 320 10 0 chr17 52293057 52293157 -33145323 - MIR SINE MIR 0 262 162 331 269 15 39 chr17 52293157 52293287 -33145193 + L1ME1 LINE L1 6040 6166 0 * 953 226 106 4 chr17 52293275 52293540 -33144940 + L1ME1 LINE L1 5871 6162 -4 418 252 118 25 chr17 52293548 52293667 -33144813 - MIR SINE MIR -86 176 47 186 313 182 0 chr17 52294444 52294543 -33143937 - MIR3 SINE MIR -22 186 70 * 219 200 0 0 chr17 52294511 52294551 -33143929 - MIR SINE MIR -162 100 61 * 246 240 173 13 chr17 52294543 52294618 -33143862 - MIR SINE MIR -87 121 35 * 502 301 124 0 chr17 52294589 52294782 -33143698 + MIR SINE MIR 33 249 -13 258 251 9 115 chr17 52294968 52295129 -33143351 - MIR SINE MIR -83 179 37 571 242 45 25 chr17 52296322 52296479 -33142001 + MIR3 SINE MIR 32 191 -17 202 331 87 31 chr17 52297605 52297732 -33140748 - L2 LINE L2 -1 3271 3138 845 250 122 58 chr17 52298032 52298554 -33139926 + L2 LINE L2 2760 3313 0 318 313 0 0 chr17 52299077 52299157 -33139323 - L2 LINE L2 -4 3268 3189 327 329 42 14 chr17 52299189 52299332 -33139148 - L2 LINE L2 0 3313 3167 402 170 245 20 chr17 52299372 52299519 -33138961 - MER58C DNA MER1_type -24 191 1 373 156 16 0 chr17 52301319 52301383 -33137097 + L1PA16 LINE L1 6093 6157 -9 2152 115 17 0 chr17 52301491 52301779 -33136701 + AluSx SINE Alu 6 298 -14 716 237 7 46 chr17 52301909 52302087 -33136393 + FRAM SINE Alu 1 172 0 400 349 53 6 chr17 52302087 52302256 -33136224 - L3 LINE CR1 -122 1455 1279 223 350 44 29 chr17 52302313 52302450 -33136030 - L3 LINE CR1 -398 1179 1041 320 269 62 62 chr17 52302703 52302848 -33135632 - MER5B DNA MER1_type -16 162 18 203 260 115 42 chr17 52302915 52303011 -33135469 - MER5A DNA MER1_type -1 188 86 190 254 175 0 chr17 52303201 52303264 -33135216 - L2 LINE L2 -2 3311 3238 231 232 71 0 chr17 52303502 52303558 -33134922 - MER117 DNA MER1_type -47 150 91 291 220 71 85 chr17 52303758 52303899 -33134581 - MIR3 SINE MIR -47 161 23 268 390 68 32 chr17 52303922 52304173 -33134307 + L2 LINE L2 3006 3265 -7 1316 251 161 17 chr17 52306614 52307081 -33131399 + MLT1H LTR MaLR 14 547 -2 544 311 130 48 chr17 52307586 52308085 -33130395 - L1ME4a LINE L1 -2 6119 5580 225 309 103 41 chr17 52308425 52308522 -33129958 + MIR SINE MIR 38 140 -68 628 65 65 0 chr17 52308542 52308635 -33129845 + L1M4c LINE L1 2296 2394 -3990 1632 157 8 4 chr17 52308635 52308902 -33129578 + L1MB3 LINE L1 5913 6180 -3 379 243 0 76 chr17 52309312 52309456 -33129024 - L2 LINE L2 0 3272 3140 274 252 114 52 chr17 52309903 52310037 -33128443 - MIR SINE MIR -65 143 22 1929 113 36 0 chr17 52310095 52310417 -33128063 + AluSx SINE Alu 1 332 0 249 208 19 0 chr17 52310770 52310823 -33127657 - Cheshire DNA MER1_type -1856 564 511 241 286 0 18 chr17 52311215 52311271 -33127209 - MIR SINE MIR -195 67 13 2380 90 0 0 chr17 52311292 52311592 -33126888 - AluSx SINE Alu -12 300 1 228 182 109 18 chr17 52311704 52311734 -33126746 - MLT2D LTR ERVL -4 440 414 324 0 0 0 chr17 52311734 52311770 -33126710 + (TG)n Simple_repeat Simple_repeat 2 37 0 228 182 109 18 chr17 52311770 52311794 -33126686 - MLT2D LTR ERVL -30 414 381 432 0 0 0 chr17 52311849 52311897 -33126583 + (TA)n Simple_repeat Simple_repeat 2 49 0 1597 199 75 9 chr17 52311913 52312245 -33126235 - MLT2D LTR ERVL -60 354 1 292 185 46 0 chr17 52312334 52312442 -33126038 + (TA)n Simple_repeat Simple_repeat 2 114 0 270 333 68 8 chr17 52313189 52313306 -33125174 - MIR SINE MIR -65 143 20 476 317 34 24 chr17 52313653 52313858 -33124622 - MIR SINE MIR -36 226 20 2245 63 16 33 chr17 52313921 52314224 -33124256 - AluY SINE Alu -13 298 1 387 298 97 0 chr17 52314824 52314948 -33123532 - MIR3 SINE MIR -23 185 50 23 33 0 0 chr17 52315676 52315706 -33122774 + AT_rich Low_complexity Low_complexity 1 30 0 32 75 0 0 chr17 52316159 52316226 -33122254 + AT_rich Low_complexity Low_complexity 1 67 0 202 325 185 6 chr17 52316264 52316421 -33122059 - MIR SINE MIR -77 185 1 288 0 0 0 chr17 52316807 52316839 -33121641 + (TG)n Simple_repeat Simple_repeat 1 32 0 227 137 88 10 chr17 52316845 52316947 -33121533 + (TA)n Simple_repeat Simple_repeat 2 111 0 181 226 214 24 chr17 52317076 52317160 -33121320 + MER5A DNA MER1_type 40 139 -50 1480 162 76 7 chr17 52318188 52318491 -33119989 - MER33 DNA MER1_type 0 324 1 437 223 132 0 chr17 52319518 52319639 -33118841 - MIR SINE MIR -55 207 71 487 309 37 11 chr17 52320055 52320243 -33118237 - MIR SINE MIR -21 241 49 542 201 110 12 chr17 52321409 52321494 -33116986 - MER104 DNA MER2_type -1718 180 105 225 0 0 0 chr17 52321494 52321519 -33116961 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 542 201 110 12 chr17 52321519 52321597 -33116883 - MER104 DNA MER2_type -1793 105 1 268 286 181 8 chr17 52321840 52321973 -33116507 + L2 LINE L2 3116 3271 -1 390 91 0 0 chr17 52323140 52323195 -33115285 + (TG)n Simple_repeat Simple_repeat 2 56 0 326 339 85 0 chr17 52323896 52324014 -33114466 + MIR SINE MIR 8 135 -127 367 262 143 18 chr17 52324514 52324682 -33113798 - MIR SINE MIR -8 254 66 939 166 6 17 chr17 52324796 52324971 -33113509 - L1MD3 LINE L1 -5 7990 7818 2815 138 2 5 chr17 52324971 52325383 -33113097 - MER1A DNA MER1_type 0 529 119 648 144 0 0 chr17 52325411 52325508 -33112972 - L1MD3 LINE L1 -170 7825 7729 27 62 0 0 chr17 52326461 52326509 -33111971 + AT_rich Low_complexity Low_complexity 1 48 0 250 291 68 48 chr17 52326716 52326819 -33111661 - L2 LINE L2 -6 3266 3162 397 272 81 60 chr17 52327951 52328029 -33110451 - MIR SINE MIR -24 238 163 2540 135 40 47 chr17 52328029 52328292 -33110188 - MSTB LTR MaLR 0 426 166 2549 72 0 0 chr17 52328292 52328597 -33109883 + AluSc SINE Alu 1 305 -4 2540 135 40 47 chr17 52328597 52328762 -33109718 - MSTB LTR MaLR -260 166 1 397 272 81 60 chr17 52328762 52328918 -33109562 - MIR SINE MIR -99 163 1 658 224 40 7 chr17 52329551 52329703 -33108777 + MIR SINE MIR 103 259 -3 492 283 75 31 chr17 52330086 52330312 -33108168 - L2 LINE L2 -1 3312 3077 264 381 79 25 chr17 52331360 52331562 -33106918 + L2 LINE L2 2897 3109 -163 512 272 142 101 chr17 52331563 52331801 -33106679 - L2 LINE L2 -3 3310 3083 1913 139 30 0 chr17 52331801 52332104 -33106376 - AluSx SINE Alu 0 312 1 512 272 142 101 chr17 52332104 52332302 -33106178 - L2 LINE L2 -230 3083 2856 * 536 259 60 36 chr17 52332288 52332454 -33106026 - MIR SINE MIR -24 184 15 1401 265 46 8 chr17 52332492 52332884 -33105596 - L2 LINE L2 -461 2853 2447 215 291 68 58 chr17 52332969 52333072 -33105408 + L2 LINE L2 3136 3239 -33 856 93 0 14 chr17 52333102 52333241 -33105239 + (GGGA)n Simple_repeat Simple_repeat 1 137 0 572 242 37 79 chr17 52333430 52333620 -33104860 - MIR SINE MIR -61 201 20 193 271 129 0 chr17 52333687 52333757 -33104723 + L3b LINE CR1 1316 1394 -189 21 0 0 0 chr17 52333819 52333840 -33104640 + GC_rich Low_complexity Low_complexity 1 21 0 214 250 0 0 chr17 52333901 52333941 -33104539 - L2 LINE L2 -6 3266 3227 643 263 145 0 chr17 52334078 52334264 -33104216 + MIR SINE MIR 32 244 -18 315 153 0 54 chr17 52334272 52334383 -33104097 + (CAGAGA)n Simple_repeat Simple_repeat 4 108 0 557 317 29 25 chr17 52335307 52335550 -33102930 - MIR SINE MIR -1 261 18 299 301 75 38 chr17 52335660 52335793 -33102687 + MIR3 SINE MIR 22 159 -49 335 264 0 0 chr17 52336060 52336132 -33102348 - MIR SINE MIR -71 137 66 271 303 40 71 chr17 52336297 52336396 -33102084 + MIR SINE MIR 34 129 -133 272 119 0 0 chr17 52336407 52336449 -33102031 + MIR SINE MIR 103 144 -118 944 152 103 0 chr17 52336839 52337004 -33101476 - MER58A DNA MER1_type 0 224 43 502 258 18 42 chr17 52337208 52337375 -33101105 - MLT1J2 LTR MaLR -6 444 282 1077 184 65 73 chr17 52337393 52337741 -33100739 - Charlie4a DNA MER1_type -1469 492 91 4989 114 23 7 chr17 52337741 52338443 -33100037 + L1MA2 LINE L1 5568 6284 -20 180 0 0 0 chr17 52338443 52338463 -33100017 + (CA)n Simple_repeat Simple_repeat 2 21 0 4989 114 23 7 chr17 52338463 52338485 -33099995 + L1MA2 LINE L1 6284 6304 0 1077 184 65 73 chr17 52338485 52338576 -33099904 - Charlie4a DNA MER1_type -1870 91 1 837 228 38 0 chr17 52338947 52339131 -33099349 - MER20 DNA MER1_type 0 219 29 344 158 0 0 chr17 52339697 52339754 -33098726 + MER103 DNA DNA 36 92 -74 27 29 0 0 chr17 52340026 52340060 -33098420 + AT_rich Low_complexity Low_complexity 1 34 0 277 220 17 0 chr17 52340095 52340154 -33098326 - MIR SINE MIR -71 137 78 1526 229 88 24 chr17 52341716 52342126 -33096354 + MER63B DNA MER1_type 1 436 0 2032 223 36 54 chr17 52342147 52342466 -33096014 - MER90 LTR ERV1 0 614 291 4218 48 8 0 chr17 52342466 52342950 -33095530 + L1PA6 LINE L1 5661 6148 -6 2032 223 36 54 chr17 52342950 52343037 -33095443 - MER90 LTR ERV1 -323 291 204 1900 115 83 0 chr17 52343037 52343315 -33095165 - AluSx SINE Alu -11 301 1 2032 223 36 54 chr17 52343315 52343462 -33095018 - MER90 LTR ERV1 -410 204 70 228 202 6 196 chr17 52343723 52343896 -33094584 + L2 LINE L2 2951 3090 -182 359 331 15 8 chr17 52343907 52344040 -33094440 - L2 LINE L2 -1 3312 3179 193 204 0 45 chr17 52344156 52344200 -33094280 - L2 LINE L2 -267 3046 3005 290 341 24 24 chr17 52344685 52344811 -33093669 + MIR3 SINE MIR 10 135 -73 408 267 12 0 chr17 52344901 52344987 -33093493 + L2 LINE L2 3186 3272 0 479 250 122 14 chr17 52345343 52345695 -33092785 - L1ME4a LINE L1 -3 6118 5697 1555 233 62 21 chr17 52346238 52346705 -33091775 - L1ME3 LINE L1 -7 6155 5670 497 315 0 8 chr17 52346737 52346867 -33091613 + MIR SINE MIR 16 144 -64 488 283 21 9 chr17 52346887 52347032 -33091448 + MIR3 SINE MIR 56 200 -8 283 236 185 4 chr17 52347142 52347280 -33091200 + MIR SINE MIR 30 200 -8 216 297 10 50 chr17 52347324 52347425 -33091055 + L2 LINE L2 3175 3271 -1 347 220 0 66 chr17 52347608 52347699 -33090781 - L2 LINE L2 -2 3270 3186 639 291 115 11 chr17 52347974 52348357 -33090123 + L2 LINE L2 2621 3038 -275 1094 183 83 0 chr17 52348411 52348651 -33089829 + L1MB7 LINE L1 5925 6184 0 647 280 7 7 chr17 52348655 52348798 -33089682 - MER5B DNA MER1_type -35 143 1 194 305 152 25 chr17 52348798 52348993 -33089487 + L2 LINE L2 3094 3313 0 639 308 91 0 chr17 52350127 52350335 -33088145 - MIR SINE MIR -30 232 6 207 0 0 0 chr17 52351657 52351680 -33086800 + (T)n Simple_repeat Simple_repeat 1 23 0 275 325 40 48 chr17 52351882 52352008 -33086472 - MIR SINE MIR -59 149 25 708 205 58 6 chr17 52353490 52353661 -33084819 + MER104 DNA MER2_type 1 180 0 4077 178 61 6 chr17 52353731 52354545 -33083935 - L1MB7 LINE L1 0 6184 5326 355 239 15 179 chr17 52354731 52354932 -33083548 + MLT1H LTR MaLR 262 429 -120 235 242 84 53 chr17 52356190 52356285 -33082195 + MIR3 SINE MIR 57 154 -54 2403 88 10 0 chr17 52356367 52356672 -33081808 - AluSg SINE Alu -2 308 1 299 305 0 42 chr17 52356698 52356816 -33081664 - MER5B DNA MER1_type -65 113 1 231 188 0 0 chr17 52356868 52356916 -33081564 + (CGTG)n Simple_repeat Simple_repeat 4 51 0 329 304 58 52 chr17 52357894 52358085 -33080395 + MIR3 SINE MIR 13 204 -4 282 317 127 0 chr17 52359063 52359205 -33079275 - MIR SINE MIR -6 256 97 214 170 64 0 chr17 52359549 52359596 -33078884 + L2 LINE L2 3262 3311 -2 21 0 0 0 chr17 52359701 52359722 -33078758 + AT_rich Low_complexity Low_complexity 1 21 0 281 292 92 25 chr17 52359839 52359959 -33078521 + MIR3 SINE MIR 62 189 -19 284 245 60 3 chr17 52361257 52361381 -33077099 + MIR SINE MIR 54 184 -61 404 349 79 5 chr17 52361962 52362151 -33076329 + MIR SINE MIR 23 225 -37 253 260 0 0 chr17 52362782 52362832 -33075648 - L2 LINE L2 -5 3267 3218 606 311 43 5 chr17 52363108 52363317 -33075163 - MIR SINE MIR -44 218 2 2153 110 0 19 chr17 52364930 52365238 -33073242 + AluSx SINE Alu 1 302 -10 288 293 53 73 chr17 52365361 52365511 -33072969 - MIR SINE MIR -96 166 20 825 133 0 0 chr17 52365617 52365737 -33072743 - L1MA4 LINE L1 -6 6294 6175 10561 160 36 42 chr17 52365739 52366452 -33072028 + L1MA4 LINE L1 2608 3323 -2980 1956 122 19 26 chr17 52366452 52366763 -33071717 + AluSx SINE Alu 1 309 -3 10561 160 36 42 chr17 52366763 52367690 -33070790 + L1MA4 LINE L1 3323 4253 -2050 1750 184 0 0 chr17 52367690 52367972 -33070508 - AluSx SINE Alu -26 286 5 10561 160 36 42 chr17 52367972 52368005 -33070475 + L1MA4 LINE L1 4253 4285 -2018 273 29 0 0 chr17 52368005 52368039 -33070441 + (CA)n Simple_repeat Simple_repeat 1 34 0 10561 160 36 42 chr17 52368039 52368608 -33069872 + L1MA4 LINE L1 4285 5911 -392 2417 83 20 9 chr17 52368606 52368956 -33069524 - L1M1 LINE L1 -689 5615 5262 * 4568 104 17 2 chr17 52368975 52369609 -33068871 + L1MA2 LINE L1 5661 6304 0 923 166 44 6 chr17 52369625 52369806 -33068674 + L1MA4 LINE L1 5896 6083 -217 205 242 113 0 chr17 52370081 52370143 -33068337 + MIR SINE MIR 86 154 -108 224 222 14 0 chr17 52370582 52370654 -33067826 + T-rich Low_complexity Low_complexity 4 76 0 309 360 67 6 chr17 52370671 52370849 -33067631 + MIR SINE MIR 2 190 -72 191 373 0 0 chr17 52370908 52370967 -33067513 - L2 LINE L2 -26 3287 3229 363 242 106 66 chr17 52371195 52371393 -33067087 - LTR67 LTR ERVL 0 557 352 550 234 103 87 chr17 52372220 52372459 -33066021 + MIR SINE MIR 19 252 -10 185 286 48 0 chr17 52372637 52372679 -33065801 - L2 LINE L2 -93 3179 3136 481 261 67 18 chr17 52372911 52373076 -33065404 - MIR SINE MIR 0 262 90 465 233 125 0 chr17 52373229 52373349 -33065131 + MER58A DNA MER1_type 6 140 0 231 254 0 0 chr17 52373359 52373418 -33065062 + MER58A DNA MER1_type 166 224 0 209 318 127 40 chr17 52373433 52373606 -33064874 + L2 LINE L2 2925 3112 -160 453 261 19 79 chr17 52373799 52374014 -33064466 + MIR3 SINE MIR 5 206 -2 259 319 59 25 chr17 52374409 52374572 -33063908 + MER5A DNA MER1_type 7 185 -4 188 346 26 0 chr17 52375520 52375598 -33062882 + L2 LINE L2 3232 3311 -2 1633 163 56 11 chr17 52376314 52376584 -33061896 - AluJb SINE Alu -30 282 1 1085 217 5 0 chr17 52376693 52376891 -33061589 + MER8 DNA MER2_type 2 200 -39 463 336 50 19 chr17 52376923 52377182 -33061298 + L2 LINE L2 2251 2517 -797 271 228 13 25 chr17 52377282 52377361 -33061119 + LTR16C LTR ERVL 109 186 -305 511 202 32 8 chr17 52377414 52377538 -33060942 + Charlie5 DNA MER1_type 1 127 -2485 * 1066 197 110 7 chr17 52377536 52377845 -33060635 + Charlie5 DNA MER1_type 2235 2575 -37 1434 158 14 54 chr17 52377845 52378123 -33060357 - AluSx SINE Alu 0 312 46 394 304 174 52 chr17 52378123 52378709 -33059771 + L2 LINE L2 2662 3312 -1 21 0 0 0 chr17 52379424 52379445 -33059035 + AT_rich Low_complexity Low_complexity 1 21 0 2147 117 0 13 chr17 52379502 52379800 -33058680 + AluSx SINE Alu 1 294 -18 540 299 145 10 chr17 52380508 52380715 -33057765 - MIR SINE MIR 0 262 28 342 280 194 6 chr17 52381375 52381537 -33056943 + MIR SINE MIR 2 189 -62 25 31 0 0 chr17 52382005 52382037 -33056443 + AT_rich Low_complexity Low_complexity 1 32 0 204 279 38 89 chr17 52382463 52382542 -33055938 + L2 LINE L2 3234 3308 -5 506 329 143 0 chr17 52382610 52382820 -33055660 - MIR SINE MIR -6 256 17 320 278 159 0 chr17 52385203 52385329 -33053151 + MIR SINE MIR 89 234 -28 220 292 83 0 chr17 52385640 52385712 -33052768 + L2 LINE L2 3227 3304 -9 231 297 46 57 chr17 52386295 52386470 -33052010 - MLT1I LTR MaLR -49 360 188 544 295 0 0 chr17 52389544 52389673 -33048807 - L2 LINE L2 0 3313 3185 722 276 69 21 chr17 52389776 52390066 -33048414 - LTR16A LTR ERVL -125 325 22 3107 300 121 42 chr17 52390096 52392120 -33046360 - L2 LINE L2 -134 3179 991 229 218 184 35 chr17 52392192 52392279 -33046201 - MIR SINE MIR -5 257 158 224 286 39 26 chr17 52392647 52392724 -33045756 - MIR SINE MIR -137 125 48 471 222 0 0 chr17 52393424 52393514 -33044966 - MER81 DNA DNA -23 91 2 331 271 91 52 chr17 52394399 52394609 -33043871 + L2 LINE L2 3096 3313 0 269 276 84 53 chr17 52394993 52395162 -33043318 + MIR SINE MIR 21 192 -63 488 123 0 0 chr17 52395865 52395930 -33042550 - AluS SINE Alu -21 291 227 15479 198 27 6 chr17 52395972 52401504 -33036976 + L1PA15 LINE L1 1170 6815 -1 231 163 0 0 chr17 52401506 52401549 -33036931 + L1ME3 LINE L1 6116 6158 -4 22 80 0 0 chr17 52401636 52401686 -33036794 + AT_rich Low_complexity Low_complexity 1 50 0 308 307 97 11 chr17 52402140 52402316 -33036164 - HAL1 LINE L1 -823 1684 1494 220 277 138 46 chr17 52402356 52402486 -33035994 + MIR SINE MIR 47 188 -74 922 141 13 0 chr17 52402795 52402951 -33035529 - MLT1D LTR MaLR 0 505 348 189 196 0 0 chr17 52404489 52404535 -33033945 + (TAA)n Simple_repeat Simple_repeat 3 48 0 235 273 104 13 chr17 52404741 52404818 -33033662 - MLT1J LTR MaLR -189 322 239 228 379 10 10 chr17 52405044 52405147 -33033333 - MIR SINE MIR -76 132 30 293 277 46 54 chr17 52405308 52405438 -33033042 + MIR3 SINE MIR 7 135 -73 601 259 127 48 chr17 52405611 52405982 -33032498 + MLT1J LTR MaLR 91 490 -21 248 256 78 22 chr17 52406792 52406882 -33031598 + L2 LINE L2 3207 3301 -12 221 315 146 0 chr17 52407132 52407221 -33031259 - MIR SINE MIR -66 196 95 196 255 143 51 chr17 52407479 52407577 -33030903 - MIR3 SINE MIR -13 195 89 296 221 0 15 chr17 52407918 52407986 -33030494 + MLT1H1 LTR MaLR 3 69 -473 204 67 0 0 chr17 52408019 52408049 -33030431 + (GTTTG)n Simple_repeat Simple_repeat 5 34 0 1623 209 7 7 chr17 52408049 52408346 -33030134 - AluJb SINE Alu -15 297 1 795 263 109 55 chr17 52408351 52408808 -33029672 + MLT1H1 LTR MaLR 74 555 0 225 196 0 0 chr17 52409343 52409394 -33029086 + CT-rich Low_complexity Low_complexity 2 52 0 1906 96 0 111 chr17 52409532 52409856 -33028624 - AluSg1 SINE Alu -1 308 21 325 106 0 0 chr17 52409858 52409905 -33028575 - Alu SINE Alu -255 47 1 445 285 58 29 chr17 52409916 52410088 -33028392 - MIR SINE MIR -66 196 20 2042 241 16 40 chr17 52410430 52410998 -33027482 - MLT2B3 LTR ERVL 0 554 1 195 372 40 20 chr17 52411053 52411201 -33027279 - MER5A DNA MER1_type -1 188 38 223 315 14 98 chr17 52411749 52411892 -33026588 - L2 LINE L2 -1 3271 3141 3157 283 129 22 chr17 52412317 52412471 -33026009 - L2 LINE L2 0 3313 3177 1538 215 51 62 chr17 52412471 52412940 -33025540 + MLT1C LTR MaLR 1 464 -3 3157 283 129 22 chr17 52412940 52414352 -33024128 - L2 LINE L2 -136 3177 1600 22 0 0 0 chr17 52415356 52415378 -33023102 + AT_rich Low_complexity Low_complexity 1 22 0 204 97 0 0 chr17 52415487 52415518 -33022962 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 606 295 71 42 chr17 52415544 52416043 -33022437 - L1MC/D LINE L1 -387 5734 5258 2526 49 0 13 chr17 52416324 52416631 -33021849 - AluY SINE Alu -8 303 1 1279 199 43 23 chr17 52416929 52416984 -33021496 - MER74A LTR ERVL -30 528 476 1808 166 17 0 chr17 52416984 52417280 -33021200 + AluJo SINE Alu 1 301 -11 1279 199 43 23 chr17 52417280 52417701 -33020779 - MER74A LTR ERVL -82 476 1 225 175 0 0 chr17 52418279 52418319 -33020161 + L1ME LINE L1 5622 5661 -460 376 272 0 0 chr17 52418654 52418746 -33019734 - L1MC4 LINE L1 -1337 6705 6614 207 330 21 0 chr17 52418973 52419067 -33019413 - MIR3 SINE MIR -52 156 61 217 271 62 52 chr17 52419241 52419337 -33019143 + MER5B DNA MER1_type 1 97 -81 186 237 0 0 chr17 52419356 52419394 -33019086 + MER5A DNA MER1_type 152 189 0 2407 100 0 0 chr17 52419412 52419723 -33018757 - AluY SINE Alu 0 311 1 617 320 55 30 chr17 52420260 52420625 -33017855 - MLT1I LTR MaLR -34 375 2 634 275 16 10 chr17 52420667 52420860 -33017620 + L1MD2 LINE L1 5458 5651 -515 760 207 50 0 chr17 52420892 52421071 -33017409 + MER20 DNA MER1_type 8 195 -24 1942 134 6 50 chr17 52421105 52421425 -33017055 + AluJb SINE Alu 2 307 -5 1390 258 63 7 chr17 52421432 52421890 -33016590 + L1MD2 LINE L1 5655 6138 -221 21 89 0 0 chr17 52421897 52421953 -33016527 + AT_rich Low_complexity Low_complexity 1 56 0 1496 170 30 113 chr17 52422275 52422604 -33015876 + AluJo SINE Alu 1 302 0 255 73 24 0 chr17 52422604 52422645 -33015835 + (GAAAA)n Simple_repeat Simple_repeat 4 180 0 183 42 0 0 chr17 52423173 52423197 -33015283 + (T)n Simple_repeat Simple_repeat 1 24 0 231 306 20 41 chr17 52424216 52424314 -33014166 - MIR SINE MIR -68 140 45 565 291 53 16 chr17 52424325 52424514 -33013966 - MIR SINE MIR -9 253 58 740 249 51 20 chr17 52424743 52424940 -33013540 + MER63A DNA MER1_type 8 210 0 191 297 93 34 chr17 52425463 52425581 -33012899 + L2 LINE L2 2917 3041 -231 244 253 13 27 chr17 52425888 52425906 -33012574 + GA-rich Low_complexity Low_complexity 3 20 -56 2141 110 0 47 chr17 52425906 52426046 -33012434 + AluSx SINE Alu 6 151 -161 2128 79 14 41 chr17 52426046 52426359 -33012121 + AluSq SINE Alu 1 305 0 2141 110 0 47 chr17 52426359 52426535 -33011945 + AluSx SINE Alu 151 308 -4 244 253 13 27 chr17 52426535 52426591 -33011889 + GA-rich Low_complexity Low_complexity 20 76 0 790 189 0 8 chr17 52427830 52427957 -33010523 - FLAM_C SINE Alu -16 127 2 267 330 17 52 chr17 52428165 52428280 -33010200 - MIR SINE MIR -78 130 20 25 0 0 0 chr17 52428481 52428506 -33009974 + AT_rich Low_complexity Low_complexity 1 25 0 351 0 0 0 chr17 52429489 52429528 -33008952 + (TG)n Simple_repeat Simple_repeat 2 40 0 537 321 51 21 chr17 52429982 52430219 -33008261 - MIR SINE MIR -18 244 1 388 319 78 37 chr17 52431788 52431979 -33006501 + MIR SINE MIR 2 200 -62 833 254 63 46 chr17 52432190 52432493 -33005987 - L2 LINE L2 -1 3312 3005 326 258 0 0 chr17 52432603 52432665 -33005815 + L2 LINE L2 3202 3263 -9 231 324 0 14 chr17 52433231 52433302 -33005178 - L2 LINE L2 -2 3311 3242 488 227 0 84 chr17 52433323 52433477 -33005003 + MER77 LTR ERV1 57 197 -408 * 946 257 72 104 chr17 52433452 52434067 -33004413 + MER21B LTR ERV1 100 694 -169 228 354 49 21 chr17 52434191 52434335 -33004145 - L2 LINE L2 -198 3074 2927 286 314 57 8 chr17 52434432 52434556 -33003924 - MIR SINE MIR -64 198 69 844 215 40 78 chr17 52434583 52434987 -33003493 + MLT1A2 LTR MaLR 1 382 -8 340 374 31 0 chr17 52435311 52435474 -33003006 - L3 LINE CR1 -96 1481 1314 916 206 184 37 chr17 52436249 52436575 -33001905 - LTR50 LTR ERVL -419 376 3 531 285 30 23 chr17 52437822 52437997 -33000483 - MIR SINE MIR -52 210 36 669 316 57 8 chr17 52438513 52438757 -32999723 - MIR SINE MIR -2 260 5 369 317 166 0 chr17 52440224 52440423 -32998057 + MIR SINE MIR 21 252 -10 297 0 0 0 chr17 52441191 52441224 -32997256 + (TTG)n Simple_repeat Simple_repeat 2 34 0 305 333 55 6 chr17 52441559 52441724 -32996756 - MIR3 SINE MIR -21 187 15 365 219 143 0 chr17 52442126 52442231 -32996249 + MER104 DNA Tc2 32 151 -29 419 298 120 40 chr17 52442295 52442520 -32995960 - MIR SINE MIR 0 262 20 472 298 68 6 chr17 52442597 52442758 -32995722 + MIR SINE MIR 71 241 -21 2192 111 88 20 chr17 52443593 52443944 -32994536 - THE1C LTR MaLR 0 375 1 23 54 0 0 chr17 52444429 52444466 -32994014 + AT_rich Low_complexity Low_complexity 1 37 0 413 340 41 33 chr17 52444727 52444971 -32993509 - MIR SINE MIR 0 262 17 354 217 203 97 chr17 52444961 52445178 -32993302 + MIR SINE MIR 13 252 -10 * 220 320 100 10 chr17 52445842 52445942 -32992538 - L2 LINE L2 -4 3268 3160 25 51 0 0 chr17 52445989 52446028 -32992452 + AT_rich Low_complexity Low_complexity 1 39 0 633 241 188 14 chr17 52446028 52446235 -32992245 - MIR SINE MIR 0 262 20 270 301 21 32 chr17 52446406 52446499 -32991981 - MIR SINE MIR -98 110 19 379 325 97 0 chr17 52446804 52446918 -32991562 - L2 LINE L2 0 3272 3148 416 279 58 13 chr17 52446925 52447079 -32991401 + MIR SINE MIR 75 235 -27 306 292 26 12 chr17 52447995 52448091 -32990389 - MIR SINE MIR -78 130 33 312 186 0 17 chr17 52448206 52448265 -32990215 - L2 LINE L2 -6 3266 3209 249 244 0 0 chr17 52448321 52448411 -32990069 - L1MC4 LINE L1 -1339 6703 6614 399 202 0 0 chr17 52448411 52448520 -32989960 + (TA)n Simple_repeat Simple_repeat 1 109 0 1550 179 11 7 chr17 52448548 52448821 -32989659 - AluJo SINE Alu -38 274 1 184 231 15 62 chr17 52449079 52449144 -32989336 + L2 LINE L2 3238 3299 -14 1377 174 180 9 chr17 52449228 52449573 -32988907 - MER96B DNA MER1_type? -13 404 1 362 228 138 66 chr17 52449902 52450069 -32988411 - MER104 DNA MER2_type 0 180 2 568 233 239 0 chr17 52450970 52451133 -32987347 + MIR SINE MIR 20 221 -41 735 179 35 23 chr17 52452001 52452328 -32986152 - MLT1F LTR MaLR 0 542 144 1686 197 82 13 chr17 52452335 52452725 -32985755 - MLT1C LTR MaLR 0 467 51 559 185 193 0 chr17 52452773 52452892 -32985588 - MLT1F LTR MaLR -425 142 1 28 61 0 0 chr17 52453118 52453167 -32985313 + AT_rich Low_complexity Low_complexity 1 49 0 515 348 94 12 chr17 52455366 52455705 -32982775 + MLT1L LTR MaLR 1 367 -248 280 202 20 91 chr17 52456881 52456980 -32981500 + L2 LINE L2 2305 2396 -918 342 0 0 0 chr17 52457069 52457107 -32981373 + (TG)n Simple_repeat Simple_repeat 2 39 0 429 320 78 7 chr17 52457414 52457567 -32980913 - MIR SINE MIR -96 166 3 305 291 67 15 chr17 52457580 52457714 -32980766 + MIR SINE MIR 114 254 -8 2470 60 0 28 chr17 52458056 52458375 -32980105 - AluY SINE Alu -1 310 1 381 339 0 31 chr17 52458514 52458644 -32979836 - L2 LINE L2 -6 3266 3141 204 400 14 29 chr17 52459308 52459448 -32979032 + MIR3 SINE MIR 3 140 -68 22 35 0 0 chr17 52459783 52459812 -32978668 + AT_rich Low_complexity Low_complexity 1 29 0 260 344 44 27 chr17 52459977 52460160 -32978320 + MIR SINE MIR 6 191 -71 363 78 0 0 chr17 52460455 52460506 -32977974 + (TG)n Simple_repeat Simple_repeat 2 52 0 209 224 75 45 chr17 52461846 52461913 -32976567 + MIR SINE MIR 194 262 0 350 316 53 0 chr17 52462767 52462900 -32975580 - MIR SINE MIR -74 188 49 508 307 137 32 chr17 52464588 52464930 -32973550 - L3 LINE CR1 -1 1576 1199 503 195 195 11 chr17 52465313 52465487 -32972993 - MIR SINE MIR -10 252 47 328 276 95 95 chr17 52465727 52465853 -32972627 + MLT1L LTR MaLR 135 260 -355 585 0 0 0 chr17 52465853 52465918 -32972562 + (CTG)n Simple_repeat Simple_repeat 2 66 0 328 276 95 95 chr17 52465918 52466190 -32972290 + MLT1L LTR MaLR 259 533 -82 407 283 45 51 chr17 52466225 52466402 -32972078 - LTR67 LTR ERVL -6 551 376 452 38 0 0 chr17 52466599 52466652 -32971828 + MADE1 DNA Mariner 2 54 -26 239 338 93 33 chr17 52466654 52466805 -32971675 - LTR67 LTR ERVL -396 161 2 189 294 0 0 chr17 52467100 52467151 -32971329 - MIR3 SINE MIR -1 207 157 180 125 0 0 chr17 52467195 52467227 -32971253 + (GA)n Simple_repeat Simple_repeat 1 32 0 2458 94 0 0 chr17 52467360 52467669 -32970811 - AluSc SINE Alu 0 309 1 373 311 90 22 chr17 52467766 52467988 -32970492 + MIR SINE MIR 20 256 -6 626 225 165 11 chr17 52468390 52468572 -32969908 - MER58C DNA MER1_type 0 215 6 331 211 266 0 chr17 52468637 52468765 -32969715 - MIR SINE MIR -3 259 98 248 340 46 33 chr17 52469031 52469184 -32969296 - L2 LINE L2 0 3313 3159 1651 236 71 16 chr17 52469419 52469842 -32968638 - MLT1J1 LTR MaLR 0 446 1 363 171 98 0 chr17 52470118 52470200 -32968280 + HsTC2 DNA Tc2 2 91 -1807 414 57 0 0 chr17 52470205 52470258 -32968222 + (TG)n Simple_repeat Simple_repeat 2 54 0 262 210 0 32 chr17 52470258 52470320 -32968160 - MER103 DNA DNA -44 122 63 388 244 47 0 chr17 52470557 52470684 -32967796 - LTR33 LTR ERVL 0 521 389 789 247 51 12 chr17 52470732 52470987 -32967493 - LTR33 LTR ERVL -237 284 20 489 329 143 0 chr17 52472214 52472424 -32966056 + MIR SINE MIR 17 256 -6 199 279 38 89 chr17 52472492 52472571 -32965909 - L2 LINE L2 -5 3267 3193 25 31 0 0 chr17 52472997 52473029 -32965451 + AT_rich Low_complexity Low_complexity 1 32 0 2359 131 40 3 chr17 52473812 52474163 -32964317 + THE1B LTR MaLR 1 364 0 716 250 20 15 chr17 52474545 52474749 -32963731 + MER63A DNA MER1_type 6 210 0 570 235 44 38 chr17 52474854 52474888 -32963592 + LTR16A1 LTR ERVL 248 280 -177 2283 186 34 0 chr17 52474888 52475302 -32963178 - MSTA LTR MaLR 0 428 1 570 235 44 38 chr17 52475302 52475450 -32963030 + LTR16A1 LTR ERVL 280 431 -26 31 0 0 0 chr17 52476608 52476639 -32961841 + AT_rich Low_complexity Low_complexity 1 31 0 2253 93 0 7 chr17 52477112 52477403 -32961077 - AluSg SINE Alu -21 289 1 23 0 0 0 chr17 52477558 52477581 -32960899 + AT_rich Low_complexity Low_complexity 1 23 0 330 307 34 17 chr17 52477751 52477927 -32960553 + GA-rich Low_complexity Low_complexity 1 179 0 517 349 133 35 chr17 52478626 52479257 -32959223 - L3 LINE CR1 -1 1576 884 392 238 0 30 chr17 52479581 52479682 -32958798 - MIR SINE MIR -62 200 103 284 288 108 0 chr17 52481955 52482066 -32956414 + LTR33 LTR ERVL 1 123 -398 670 213 0 8 chr17 52482518 52482640 -32955840 - FLAM_A SINE Alu -12 121 1 3826 166 12 18 chr17 52482798 52483535 -32954945 + L1MB4 LINE L1 5406 6138 -42 2012 212 78 17 chr17 52483883 52484355 -32954125 - MLT1D LTR MaLR -4 501 1 1234 155 36 20 chr17 52485488 52485740 -32952740 - MER46B DNA MER2_type 0 236 106 243 293 20 76 chr17 52486860 52487058 -32951422 + L2 LINE L2 2807 2993 -279 189 107 0 0 chr17 52490138 52490166 -32948314 + (GGA)n Simple_repeat Simple_repeat 1 28 0 2347 171 31 39 chr17 52490582 52491091 -32947389 + MLT1D LTR MaLR 1 505 0 314 289 42 63 chr17 52491625 52491815 -32946665 - MIR3 SINE MIR -8 200 15 256 200 17 17 chr17 52493545 52493605 -32944875 - L2 LINE L2 -4 3268 3209 604 301 75 46 chr17 52493609 52494194 -32944286 - L2 LINE L2 -5 3308 2709 275 273 109 31 chr17 52495588 52495716 -32942764 + MIR SINE MIR 117 254 -8 459 320 149 0 chr17 52496201 52496376 -32942104 - MIR SINE MIR -14 248 48 217 219 0 0 chr17 52496558 52496599 -32941881 + (CATA)n Simple_repeat Simple_repeat 3 43 0 630 296 70 44 chr17 52496641 52497758 -32940722 - L1MC4a LINE L1 -751 5395 4737 423 250 9 127 chr17 52498021 52498233 -32940247 - MIR SINE MIR -73 189 3 230 275 21 84 chr17 52498233 52498330 -32940150 + MIR SINE MIR 77 164 -98 567 241 80 30 chr17 52498469 52498653 -32939827 - MIR SINE MIR -55 153 7 185 370 0 25 chr17 52500296 52500377 -32938103 + L2 LINE L2 3225 3303 -10 183 100 0 0 chr17 52500378 52500408 -32938072 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 345 301 38 23 chr17 52501076 52501209 -32937271 - MER5A DNA MER1_type -37 152 18 392 252 14 29 chr17 52501925 52502064 -32936416 + L1ME4a LINE L1 5680 5816 -305 228 264 149 8 chr17 52502136 52502257 -32936223 + L1ME4a LINE L1 5978 6115 -6 1941 133 42 18 chr17 52503426 52503809 -32934671 + L1MA8 LINE L1 5815 6206 -85 207 0 0 0 chr17 52504676 52504699 -32933781 + (A)n Simple_repeat Simple_repeat 1 23 0 595 252 200 29 chr17 52505624 52506253 -32932227 + LTR50 LTR ERVL 23 795 0 253 252 49 24 chr17 52507339 52507462 -32931018 - Charlie7 DNA MER1_type 0 2612 2487 725 280 153 13 chr17 52507515 52507736 -32930744 + L2 LINE L2 2857 3046 -267 1460 262 62 14 chr17 52507736 52508233 -32930247 + LTR33 LTR ERVL 1 521 0 725 280 153 13 chr17 52508233 52508390 -32930090 + L2 LINE L2 3046 3288 -25 227 204 0 0 chr17 52508415 52508459 -32930021 - Charlie7 DNA MER1_type -2534 78 35 500 129 24 0 chr17 52509660 52509745 -32928735 - MLT1C LTR MaLR 0 467 381 475 174 0 31 chr17 52509760 52509858 -32928622 - MLT1C LTR MaLR -353 114 20 833 145 0 58 chr17 52509880 52510018 -32928462 + FRAM SINE Alu 29 158 -18 535 226 0 0 chr17 52510420 52510513 -32927967 - AluJ/FLAM SINE Alu -219 93 1 322 136 51 0 chr17 52510526 52510585 -32927895 + LTR41 LTR ERVL 706 767 -6 333 288 53 8 chr17 52510607 52510871 -32927609 - L1M4 LINE L1 -1118 5028 4753 314 234 73 32 chr17 52511165 52511289 -32927191 - L1M4 LINE L1 -1693 4453 4325 213 279 135 19 chr17 52511458 52511562 -32926918 - MIR SINE MIR -50 212 97 241 262 79 71 chr17 52511581 52511707 -32926773 - MIR SINE MIR -66 142 16 223 322 146 56 chr17 52512864 52513131 -32925349 + L2 LINE L2 2827 3117 -155 1964 68 0 0 chr17 52513199 52513450 -32925030 + L1PA8 LINE L1 5913 6163 -9 325 169 0 0 chr17 52513450 52513505 -32924975 - L1MD3 LINE L1 -17 7978 7921 294 329 61 102 chr17 52515181 52515592 -32922888 + L2 LINE L2 2873 3266 -6 396 0 0 0 chr17 52516734 52516778 -32921702 + (TG)n Simple_repeat Simple_repeat 1 44 0 316 309 161 31 chr17 52516887 52517049 -32921431 + L1ME LINE L1 272 454 -5616 243 88 0 0 chr17 52517251 52517285 -32921195 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 1298 242 141 27 chr17 52517294 52518150 -32920330 + L1ME LINE L1 543 1496 -4584 488 239 31 0 chr17 52518130 52518293 -32920187 + L1ME LINE L1 2725 2892 -3188 * 737 214 115 64 chr17 52518294 52518607 -32919873 + MLT2C1 LTR ERVL 2 330 -67 390 21 0 0 chr17 52518632 52518679 -32919801 + (CA)n Simple_repeat Simple_repeat 2 48 0 920 240 47 52 chr17 52518712 52519207 -32919273 + L1ME LINE L1 2891 3382 -2698 12528 205 26 11 chr17 52519217 52525305 -32913175 + L1PA16 LINE L1 734 6869 0 340 231 240 24 chr17 52525328 52525536 -32912944 + MLT1E2 LTR MaLR 11 263 -363 1911 218 67 56 chr17 52525540 52526179 -32912301 + L1ME1 LINE L1 5518 6163 -3 489 274 134 31 chr17 52526686 52526909 -32911571 - MIR SINE MIR -15 247 2 243 269 0 0 chr17 52527125 52527177 -32911303 - L2 LINE L2 -17 3296 3245 23 0 0 0 chr17 52527297 52527320 -32911160 + AT_rich Low_complexity Low_complexity 1 23 0 37 62 0 0 chr17 52529278 52529343 -32909137 + AT_rich Low_complexity Low_complexity 1 65 0 476 299 143 58 chr17 52530538 52531555 -32906925 + L1ME2 LINE L1 45 1253 -5143 2358 78 0 10 chr17 52531555 52531861 -32906619 + AluSc SINE Alu 1 303 -6 476 299 143 58 chr17 52531861 52532474 -32906006 + L1ME2 LINE L1 1253 1813 -4583 448 247 29 121 chr17 52532496 52532844 -32905636 + L1ME2 LINE L1 2007 2322 -4074 1919 121 11 3 chr17 52532848 52533159 -32905321 + AluSx SINE Alu 1 313 0 1060 145 0 43 chr17 52533159 52533345 -32905135 + AluSg/x SINE Alu 128 305 -7 5913 279 89 18 chr17 52533346 52535818 -32902662 + L1ME2 LINE L1 2278 4971 -1244 414 69 0 0 chr17 52535818 52535876 -32902604 + (TG)n Simple_repeat Simple_repeat 1 58 0 5913 279 89 18 chr17 52535876 52536178 -32902302 + L1ME2 LINE L1 4971 5250 -965 1157 229 67 31 chr17 52536338 52536665 -32901815 - MER88 LTR ERVL -125 339 1 364 134 24 49 chr17 52536670 52536752 -32901728 + L1ME2 LINE L1 5262 5341 -874 1757 121 18 0 chr17 52536782 52537054 -32901426 - L1PA14 LINE L1 -2 6159 5883 4086 135 20 18 chr17 52537220 52538322 -32900158 - L1PA14 LINE L1 -262 5899 4801 3004 261 22 7 chr17 52538319 52539130 -32899350 + L1ME2 LINE L1 5404 6226 -7 * 244 339 63 31 chr17 52540191 52540318 -32898162 + L2 LINE L2 3108 3238 -34 10846 175 13 14 chr17 52541678 52544986 -32893494 + L1PB1 LINE L1 2849 6151 0 233 200 0 0 chr17 52545041 52545086 -32893394 - L2 LINE L2 -4 3309 3265 1079 152 33 0 chr17 52545262 52545473 -32893007 + L1MCa LINE L1 1770 1987 -4439 940 139 70 11 chr17 52545491 52545678 -32892802 + L1MCa LINE L1 2056 2253 -4173 207 275 58 14 chr17 52545682 52545751 -32892729 - L2 LINE L2 -937 2377 2306 380 246 16 8 chr17 52545753 52545875 -32892605 - L2 LINE L2 -1204 2110 1988 266 274 37 15 chr17 52545919 52546054 -32892426 + L1ME4a LINE L1 5984 6121 0 1170 159 152 4 chr17 52546205 52546482 -32891998 - MER33 DNA MER1_type -3 321 4 378 295 29 9 chr17 52546496 52546601 -32891879 + MER5A DNA MER1_type 6 112 -77 2059 82 16 13 chr17 52546610 52546913 -32891567 - L1PA13 LINE L1 0 6163 5860 1838 82 4 0 chr17 52546913 52547158 -32891322 + L1PA12 LINE L1 5652 5897 -271 272 210 32 16 chr17 52547158 52547220 -32891260 - MER5A DNA MER1_type -118 71 9 673 219 7 7 chr17 52547375 52547512 -32890968 - MIR SINE MIR -111 151 15 238 240 59 36 chr17 52548422 52548564 -32889916 + MIR SINE MIR 41 187 -21 223 303 67 34 chr17 52548889 52548978 -32889502 + L2 LINE L2 3169 3260 -12 2151 111 3 0 chr17 52548979 52549277 -32889203 + AluSp SINE Alu 1 299 -14 247 320 102 14 chr17 52549803 52549950 -32888530 + L2 LINE L2 3154 3313 0 250 365 55 69 chr17 52551326 52551600 -32886880 - L2 LINE L2 -20 3252 2983 280 288 0 0 chr17 52551835 52551901 -32886579 + MIR SINE MIR 86 151 -57 21 0 0 0 chr17 52552177 52552198 -32886282 + AT_rich Low_complexity Low_complexity 1 21 0 222 391 113 7 chr17 52553497 52553648 -32884832 - L2 LINE L2 -20 3252 3086 21 0 0 0 chr17 52553872 52553893 -32884587 + AT_rich Low_complexity Low_complexity 1 21 0 333 291 107 65 chr17 52554521 52554830 -32883650 + L2 LINE L2 2988 3309 -4 1867 278 77 18 chr17 52556788 52557397 -32881083 + MLT2F LTR ERVL 12 656 -7 187 359 58 10 chr17 52557842 52557945 -32880535 + MIR SINE MIR 154 261 -1 224 341 111 9 chr17 52557986 52558125 -32880355 - MIR SINE MIR -71 191 40 446 175 103 71 chr17 52558162 52558288 -32880192 - MIR SINE MIR -31 231 102 305 287 82 8 chr17 52558381 52558503 -32879977 + MIR SINE MIR 112 242 -20 896 215 87 0 chr17 52558567 52558762 -32879718 + MER58C DNA MER1_type 1 212 -3 580 60 0 24 chr17 52559585 52559669 -32878811 + L1PA5 LINE L1 6073 6154 0 293 278 139 35 chr17 52560275 52560419 -32878061 - MIR SINE MIR -101 161 3 252 333 65 111 chr17 52560568 52560982 -32877498 + L2 LINE L2 2878 3272 0 23 54 0 0 chr17 52562663 52562700 -32875780 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr17 52563747 52563774 -32874706 + AT_rich Low_complexity Low_complexity 1 27 0 798 304 78 45 chr17 52564472 52565251 -32873229 - L1M4 LINE L1 -1754 4392 3588 371 259 131 57 chr17 52565355 52565637 -32872843 - L1M4 LINE L1 -2705 3441 3139 279 265 108 12 chr17 52566366 52566449 -32872031 + L2 LINE L2 3149 3239 -33 5537 114 11 24 chr17 52567171 52568178 -32870302 + L1PB1 LINE L1 5109 6099 -52 21 0 0 0 chr17 52568218 52568239 -32870241 + AT_rich Low_complexity Low_complexity 1 21 0 233 303 101 0 chr17 52568472 52568561 -32869919 + MIR SINE MIR 50 147 -115 270 258 109 55 chr17 52569530 52569658 -32868822 - MIR SINE MIR -24 238 104 367 305 68 0 chr17 52569681 52569799 -32868681 - MIR SINE MIR -74 188 63 319 308 75 9 chr17 52569953 52570060 -32868420 - MIR3 SINE MIR -11 197 84 276 259 71 83 chr17 52570528 52571060 -32867420 + L1ME3A LINE L1 586 1111 -5008 551 222 0 0 chr17 52571199 52571298 -32867182 + MER2 DNA MER2_type 1 99 -246 407 278 100 42 chr17 52571724 52571983 -32866497 + L1ME3A LINE L1 4762 5035 -1094 229 262 103 19 chr17 52572119 52572226 -32866254 + L1ME3A LINE L1 5189 5304 -825 229 286 105 15 chr17 52572193 52572326 -32866154 + L1P2 LINE L1 5297 5441 -696 276 259 108 0 chr17 52572365 52572504 -32865976 + L1ME3A LINE L1 5743 5896 -257 1945 176 44 60 chr17 52573894 52574082 -32864398 + MSTB LTR MaLR 1 191 -235 1847 184 0 0 chr17 52574082 52574376 -32864104 + AluSx SINE Alu 1 294 -18 1945 176 44 60 chr17 52574376 52574620 -32863860 + MSTB LTR MaLR 191 426 0 7965 192 34 8 chr17 52574620 52576224 -32862256 + MSTB-int LTR MaLR 1 1645 -6 2221 187 26 5 chr17 52576230 52576647 -32861833 + MSTB LTR MaLR 1 426 0 431 220 7 93 chr17 52577029 52577179 -32861301 - L1ME3A LINE L1 -13 6157 6021 422 212 12 85 chr17 52577202 52577353 -32861127 - L1MEc LINE L1 -3216 3210 3070 252 86 0 0 chr17 52577353 52577388 -32861092 + (TA)n Simple_repeat Simple_repeat 2 36 0 422 212 12 85 chr17 52577388 52577401 -32861079 - L1MEc LINE L1 -3356 3070 3058 774 231 30 0 chr17 52577422 52577656 -32860824 - L1MEc LINE L1 -3568 2858 2618 293 269 11 7 chr17 52577959 52578099 -32860381 - L1MEc LINE L1 -4635 1876 1684 2447 149 16 5 chr17 52578103 52578532 -32859948 - L1PA16 LINE L1 -5 6161 5728 378 71 0 0 chr17 52578532 52578582 -32859898 + L1PA16 LINE L1 6106 6161 -5 2074 140 22 3 chr17 52578655 52579013 -32859467 - L1PA16 LINE L1 -406 5760 5396 7912 208 10 39 chr17 52579058 52579488 -32858992 + L1 LINE L1 3191 3632 -2514 232 67 0 0 chr17 52579488 52579518 -32858962 + U2 snRNA snRNA 4 33 -155 7912 208 10 39 chr17 52579518 52581266 -32857214 + L1 LINE L1 3632 5334 -812 545 276 121 31 chr17 52581282 52581539 -32856941 - L1MEc LINE L1 -4883 1543 1264 284 317 62 7 chr17 52582146 52582291 -32856189 + MIR SINE MIR 109 261 -1 206 311 11 0 chr17 52582292 52582382 -32856098 + (ATG)n Simple_repeat Simple_repeat 3 93 0 321 205 13 26 chr17 52582481 52582559 -32855921 + Charlie3 DNA MER1_type 2587 2663 -47 255 208 21 10 chr17 52583382 52583478 -32855002 + (TA)n Simple_repeat Simple_repeat 1 97 0 3008 134 15 34 chr17 52583928 52583942 -32854538 - MER1A DNA MER1_type -2173 529 516 2513 120 11 11 chr17 52583942 52584317 -32854163 - THE1C LTR MaLR 0 375 1 3008 134 15 34 chr17 52584317 52584840 -32853640 - MER1A DNA MER1_type -2186 516 2 289 294 103 8 chr17 52584858 52584984 -32853496 + MIR3 SINE MIR 69 206 -2 341 188 79 69 chr17 52585212 52585313 -32853167 - MIR SINE MIR -96 166 65 188 233 58 47 chr17 52585486 52585572 -32852908 + MIR SINE MIR 119 205 -57 1934 219 61 47 chr17 52587992 52588530 -32849950 + MLT2B3 LTR ERVL 1 546 -8 2183 119 7 0 chr17 52588607 52588901 -32849579 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 52589734 52589754 -32848726 + (TTA)n Simple_repeat Simple_repeat 2 21 0 284 222 33 0 chr17 52590286 52590376 -32848104 + MER94 DNA DNA 2 94 -40 443 307 94 26 chr17 52590793 52591135 -32847345 + L1ME3A LINE L1 5556 5920 -250 318 137 0 0 chr17 52591203 52591254 -32847226 - L1M2 LINE L1 -566 5725 5675 2181 182 36 40 chr17 52591292 52591824 -32846656 + L1MA10 LINE L1 5801 6330 -4 462 247 124 39 chr17 52592046 52592224 -32846256 + MIR SINE MIR 23 215 -47 195 286 71 24 chr17 52592300 52592384 -32846096 - MIR3 SINE MIR -23 185 98 1761 207 114 91 chr17 52592471 52593318 -32845162 + LTR28 LTR ERV1 1 1020 0 229 194 0 119 chr17 52593351 52593418 -32845062 - MER58C DNA MER1_type -155 60 2 983 127 48 6 chr17 52593423 52593589 -32844891 - MER5A DNA MER1_type -1 188 16 434 311 146 50 chr17 52593768 52594070 -32844410 - L2 LINE L2 -35 3237 2907 672 265 61 5 chr17 52594085 52594281 -32844199 + MIR SINE MIR 56 262 0 200 309 99 31 chr17 52594734 52594896 -32843584 - L2 LINE L2 -1237 2077 1905 214 318 0 12 chr17 52595198 52595283 -32843197 + L2 LINE L2 2897 2980 -292 185 245 20 0 chr17 52595505 52595554 -32842926 + L2 LINE L2 3263 3312 -1 251 307 87 16 chr17 52595723 52595850 -32842630 - MIR SINE MIR -36 226 91 392 319 0 0 chr17 52596418 52596512 -32841968 + MIR3 SINE MIR 106 199 -9 531 367 131 12 chr17 52597063 52597543 -32840937 + L3 LINE CR1 966 1502 -75 222 118 0 0 chr17 52597577 52597611 -32840869 + (T)n Simple_repeat Simple_repeat 1 34 0 2156 282 36 25 chr17 52597912 52598873 -32839607 + L1ME1 LINE L1 35 1006 -5390 8440 183 25 17 chr17 52598884 52601753 -32836727 - L1MA9 LINE L1 -5 6307 3403 1957 166 0 0 chr17 52601753 52602055 -32836425 - AluJo SINE Alu -10 302 1 1270 280 65 30 chr17 52602070 52603031 -32835449 + L1ME1 LINE L1 996 1989 -4407 * 3083 248 83 24 chr17 52603028 52604412 -32834068 + L1ME1 LINE L1 2520 3985 -2230 1579 236 94 18 chr17 52604397 52604910 -32833570 + L1ME1 LINE L1 5680 6231 -4 * 21 0 0 0 chr17 52605166 52605187 -32833293 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 52605489 52605510 -32832970 + AT_rich Low_complexity Low_complexity 1 21 0 258 237 134 21 chr17 52605822 52605919 -32832561 - L2 LINE L2 -13 3300 3193 250 360 113 40 chr17 52606144 52606472 -32832008 - L2 LINE L2 -374 2940 2589 885 297 37 12 chr17 52606691 52606937 -32831543 + MIR SINE MIR 6 257 -5 1055 348 100 23 chr17 52607042 52607236 -32831244 + L2 LINE L2 2140 2318 -954 1802 193 8 23 chr17 52607236 52607588 -32830892 + MER7A DNA MER2_type 1 345 -1 1055 348 100 23 chr17 52607588 52608402 -32830078 + L2 LINE L2 2318 3230 -42 608 193 11 17 chr17 52608443 52608624 -32829856 + GA-rich Low_complexity Low_complexity 1 180 0 5702 107 25 7 chr17 52608644 52609738 -32828742 + L1PA13 LINE L1 5033 6144 -19 27 0 0 0 chr17 52609741 52609768 -32828712 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr17 52610079 52610104 -32828376 + AT_rich Low_complexity Low_complexity 1 25 0 257 147 0 15 chr17 52610360 52610428 -32828052 + (TG)n Simple_repeat Simple_repeat 1 67 0 676 248 86 126 chr17 52610735 52611143 -32827337 + HAL1 LINE L1 793 1175 -1332 7337 93 13 24 chr17 52611143 52612226 -32826254 + MER11C LTR ERVK 1 1071 0 676 248 86 126 chr17 52612226 52612374 -32826106 + HAL1 LINE L1 1175 1327 -1180 379 221 58 48 chr17 52612374 52612478 -32826002 - L2 LINE L2 0 3313 3209 314 322 55 31 chr17 52612500 52612792 -32825688 + HAL1 LINE L1 1385 1683 -824 1144 254 27 6 chr17 52614279 52614609 -32823871 - MER97b DNA MER1_type? -450 603 267 390 159 0 14 chr17 52614609 52614678 -32823802 + Tigger2 DNA MER2_type 1 68 -2650 * 2463 141 39 2 chr17 52614666 52615098 -32823382 + Tigger2 DNA MER2_type 2271 2718 0 1139 213 17 0 chr17 52615098 52615338 -32823142 - MER97c DNA MER1_type? -846 244 1 260 274 27 40 chr17 52615839 52615991 -32822489 - MIR SINE MIR -66 142 5 539 321 30 104 chr17 52616098 52616434 -32822046 + L2 LINE L2 2946 3256 -16 478 305 0 8 chr17 52616726 52616854 -32821626 - MIR3 SINE MIR -15 193 67 916 91 0 0 chr17 52617001 52617133 -32821347 + L1PA5 LINE L1 6020 6151 -3 1879 220 40 2 chr17 52617549 52618030 -32820450 + L1MD3 LINE L1 7492 7990 -5 1940 205 92 13 chr17 52618514 52618948 -32819532 + MLT1D LTR MaLR 12 485 -20 1808 144 57 38 chr17 52618948 52619316 -32819164 + THE1C LTR MaLR 1 375 0 1940 205 92 13 chr17 52619316 52619339 -32819141 + MLT1D LTR MaLR 485 505 0 1214 124 6 0 chr17 52619517 52619686 -32818794 - AluSq SINE Alu -10 303 134 4874 224 71 7 chr17 52619690 52620851 -32817629 + MSTB1-int LTR MaLR 402 1636 -15 2346 166 25 30 chr17 52620865 52621299 -32817181 + MSTB1 LTR MaLR 1 432 0 1913 241 131 2 chr17 52621299 52621850 -32816630 + MLT1E1 LTR MaLR 25 646 -8 354 256 73 81 chr17 52622397 52622643 -32815837 + L2 LINE L2 2731 2974 -340 1988 152 72 3 chr17 52623249 52623598 -32814882 + THE1C LTR MaLR 1 373 -2 9348 110 25 28 chr17 52623600 52623821 -32814659 + THE1B-int LTR MaLR 1 221 -1359 2323 122 37 6 chr17 52623821 52624174 -32814306 + THE1B LTR MaLR 1 364 0 9348 110 25 28 chr17 52624174 52625528 -32812952 + THE1B-int LTR MaLR 221 1570 -10 1916 144 33 27 chr17 52625543 52625910 -32812570 + THE1C LTR MaLR 7 375 0 497 286 82 10 chr17 52626050 52626246 -32812234 - MLT1L LTR MaLR -14 601 392 1946 181 35 10 chr17 52626308 52626712 -32811768 - MLT2D LTR ERVL 0 414 1 288 250 37 46 chr17 52626716 52626824 -32811656 - MLT1L LTR MaLR -418 197 91 236 391 93 13 chr17 52627005 52627156 -32811324 + L2 LINE L2 3101 3263 -9 468 347 25 17 chr17 52627802 52628041 -32810439 - MIR SINE MIR 0 262 22 272 228 43 33 chr17 52628796 52628888 -32809592 - MIR SINE MIR -104 158 66 21 36 0 0 chr17 52629732 52629760 -32808720 + AT_rich Low_complexity Low_complexity 1 28 0 416 19 19 0 chr17 52630127 52630180 -32808300 + (CA)n Simple_repeat Simple_repeat 1 54 0 276 217 0 43 chr17 52631592 52631684 -32806796 - MER20B DNA MER1_type -17 766 679 345 173 173 0 chr17 52632121 52632231 -32806249 - MER20B DNA MER1_type -108 675 547 1385 212 37 6 chr17 52632231 52632556 -32805924 + MER58B DNA MER1_type 1 335 -6 1507 269 110 13 chr17 52632601 52633200 -32805280 - MER20B DNA MER1_type -126 657 1 2130 197 46 54 chr17 52684301 52684947 -32753533 + L1ME3 LINE L1 5522 6162 0 182 376 101 0 chr17 52685394 52685503 -32752977 + MIR SINE MIR 22 141 -67 256 287 161 49 chr17 52686497 52686863 -32751617 - L1MC/D LINE L1 -2081 5727 5321 493 305 33 29 chr17 52686879 52687089 -32751391 - L3 LINE CR1 -114 1463 1253 216 200 0 0 chr17 52687089 52687139 -32751341 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 612 203 158 13 chr17 52687725 52687883 -32750597 - MER5A DNA MER1_type 0 189 9 219 346 33 46 chr17 52687955 52688108 -32750372 - L3 LINE CR1 -586 991 841 540 330 136 38 chr17 52688331 52688847 -32749633 - L2 LINE L2 0 3313 2749 1541 303 150 14 chr17 52688932 52689853 -32748627 - L2 LINE L2 -864 2450 1405 184 273 15 0 chr17 52690187 52690253 -32748227 + L2 LINE L2 2992 3058 -214 217 261 0 31 chr17 52691350 52691415 -32747065 + CT-rich Low_complexity Low_complexity 2 64 0 1089 255 54 6 chr17 52691931 52692245 -32746235 + MER93a LTR ERV1 74 402 0 316 308 82 27 chr17 52692515 52692661 -32745819 + MER5B DNA MER1_type 8 161 -17 521 219 30 83 chr17 52693371 52693540 -32744940 + MIR SINE MIR 11 170 -92 1767 160 0 38 chr17 52693651 52693964 -32744516 - AluJb SINE Alu -11 301 1 373 246 186 8 chr17 52694441 52694559 -32743921 - MER5B DNA MER1_type -9 169 31 229 250 73 29 chr17 52694590 52694658 -32743822 + MER5A DNA MER1_type 119 189 0 2158 79 45 7 chr17 52694712 52695002 -32743478 - AluY SINE Alu -10 301 1 430 299 138 6 chr17 52695002 52695176 -32743304 + MIR SINE MIR 54 250 -12 402 245 199 20 chr17 52695278 52695429 -32743051 + MIR SINE MIR 84 261 -1 432 73 37 0 chr17 52697615 52697697 -32740783 + (TA)n Simple_repeat Simple_repeat 2 86 0 1067 145 6 0 chr17 52697698 52697877 -32740603 + L1PB1 LINE L1 5794 5973 -178 2235 93 0 10 chr17 52697877 52698167 -32740313 + AluSg SINE Alu 1 287 -23 341 89 18 0 chr17 52698267 52698323 -32740157 + AluSc SINE Alu 243 299 0 970 163 11 11 chr17 52698330 52698520 -32739960 + L1PB1 LINE L1 5959 6148 -3 514 210 27 59 chr17 52698520 52698731 -32739749 + L1M4 LINE L1 4405 4610 -1536 219 302 9 85 chr17 52699266 52699372 -32739108 + L2 LINE L2 2490 2587 -727 226 256 139 12 chr17 52699933 52700019 -32738461 + MIR SINE MIR 31 127 -135 874 251 121 78 chr17 52700116 52700554 -32737926 - LTR16A1 LTR ERVL 0 457 1 749 242 15 10 chr17 52701939 52702137 -32736343 + MER58A DNA MER1_type 26 224 0 579 319 105 0 chr17 52702137 52702347 -32736133 + MIR SINE MIR 31 262 0 729 269 84 9 chr17 52703963 52704190 -32734290 + MIR SINE MIR 8 251 -11 24 32 0 0 chr17 52704402 52704433 -32734047 + AT_rich Low_complexity Low_complexity 1 31 0 2462 121 98 8 chr17 52704586 52704984 -32733496 + MER61C LTR ERV1 1 434 0 279 173 0 62 chr17 52704984 52705065 -32733415 + MER61C-int LTR ERV1 2 77 -7014 267 219 41 0 chr17 52705154 52705227 -32733253 + MER61C-int LTR ERV1 407 482 -6609 1357 159 28 75 chr17 52705272 52705451 -32733029 + MER61C-int LTR ERV1 181 367 -4850 2329 102 0 0 chr17 52705451 52705745 -32732735 + AluSc SINE Alu 1 294 -15 1357 159 28 75 chr17 52705745 52706060 -32732420 + MER61C-int LTR ERV1 367 4128 -1089 1336 192 14 18 chr17 52706058 52706339 -32732141 + MER61C-int LTR ERV1 4296 4575 -642 * 1549 106 4 0 chr17 52706341 52706567 -32731913 + MER61C-int LTR ERV1 2213 2439 -4979 * 10929 183 38 59 chr17 52706564 52710076 -32728404 + MER61C-int LTR ERV1 1213 5204 -13 2510 139 43 5 chr17 52710115 52710533 -32727947 + MER61C LTR ERV1 1 434 0 306 50 0 0 chr17 52711226 52711266 -32727214 + (CA)n Simple_repeat Simple_repeat 2 41 0 1395 207 13 39 chr17 52711759 52712141 -32726339 - MER96B DNA MER1_type? -45 372 1 423 92 0 0 chr17 52712890 52712955 -32725525 + (TG)n Simple_repeat Simple_repeat 2 66 0 276 234 206 19 chr17 52713250 52713357 -32725123 + L2 LINE L2 3187 3313 0 401 289 50 69 chr17 52713826 52713985 -32724495 - MIR SINE MIR -79 183 28 286 306 157 47 chr17 52714153 52714408 -32724072 + L2 LINE L2 2807 3089 -183 * 314 288 43 80 chr17 52714395 52714730 -32723750 + L2 LINE L2 2725 3053 -219 2145 135 18 29 chr17 52714840 52715224 -32723256 + LTR57 LTR ERVL 1 380 -31 186 103 0 0 chr17 52715492 52715521 -32722959 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 336 268 112 73 chr17 52715521 52715700 -32722780 - L2 LINE L2 -13 3300 3115 369 319 53 0 chr17 52716755 52716943 -32721537 - L1MC4a LINE L1 -1880 5928 5731 452 279 49 49 chr17 52717531 52717714 -32720766 - MIR SINE MIR -78 184 2 204 380 62 49 chr17 52717727 52717951 -32720529 + L2 LINE L2 3044 3270 -2 925 237 5 10 chr17 52718946 52719144 -32719336 - MIR SINE MIR -51 211 15 4086 153 31 6 chr17 52719397 52720246 -32718234 + L1MA8 LINE L1 5164 6028 -263 1087 158 0 0 chr17 52720252 52720416 -32718064 - FRAM SINE Alu -2 174 11 1357 121 40 4 chr17 52720416 52720664 -32717816 + L1MA8 LINE L1 6018 6274 -17 2897 55 0 33 chr17 52721352 52721751 -32716729 + L1PA3 LINE L1 5770 6155 0 31 0 0 0 chr17 52721758 52721789 -32716691 + AT_rich Low_complexity Low_complexity 1 31 0 232 264 39 30 chr17 52721915 52722053 -32716427 + MIR SINE MIR 1 220 -42 180 260 62 62 chr17 52723160 52723256 -32715224 + L2 LINE L2 2969 3064 -208 276 296 0 37 chr17 52723356 52723437 -32715043 + L2 LINE L2 3191 3268 -4 456 325 42 6 chr17 52723920 52724086 -32714394 + MIR SINE MIR 17 188 -74 379 335 33 61 chr17 52724352 52724617 -32713863 + L2 LINE L2 2380 2630 -684 4446 131 55 3 chr17 52724617 52725303 -32713177 + MER72 LTR ERV1 1 722 0 379 335 33 61 chr17 52725303 52725464 -32713016 + L2 LINE L2 2630 2794 -520 638 270 83 26 chr17 52726726 52726956 -32711524 + MIR SINE MIR 20 262 0 229 208 104 0 chr17 52727231 52727279 -32711201 + L2 LINE L2 3219 3271 -1 2093 176 47 7 chr17 52727520 52727929 -32710551 - MLT1D LTR MaLR 0 505 81 514 235 79 0 chr17 52728709 52728860 -32709620 + MIR SINE MIR 33 193 -65 500 261 113 10 chr17 52728867 52729062 -32709418 + MIR SINE MIR 11 225 -37 591 270 50 0 chr17 52729252 52729452 -32709028 + L1ME1 LINE L1 5953 6162 -4 1434 178 17 56 chr17 52729485 52729840 -32708640 - MER58B DNA MER1_type 0 341 1 963 219 0 46 chr17 52730705 52730924 -32707556 - MER58A DNA MER1_type -15 209 1 231 211 14 42 chr17 52731609 52731680 -32706800 - MIR SINE MIR -11 251 183 21 0 0 0 chr17 52731783 52731804 -32706676 + AT_rich Low_complexity Low_complexity 1 21 0 467 242 41 61 chr17 52731947 52732121 -32706359 - MIR SINE MIR -62 146 25 241 313 0 0 chr17 52732550 52732646 -32705834 + L1ME4a LINE L1 5959 6054 -67 25 31 0 0 chr17 52733697 52733729 -32704751 + AT_rich Low_complexity Low_complexity 1 32 0 331 241 13 13 chr17 52733857 52733936 -32704544 - MIR SINE MIR -6 256 178 413 277 112 32 chr17 52734018 52734206 -32704274 - MIR SINE MIR -3 259 57 267 288 42 25 chr17 52734679 52734797 -32703683 - MIR SINE MIR -68 140 21 789 88 0 0 chr17 52735440 52735554 -32702926 + L1PA5 LINE L1 6041 6154 0 744 169 31 0 chr17 52735566 52735696 -32702784 + AluSp SINE Alu 1 134 -179 2214 29 68 7 chr17 52735697 52736003 -32702477 + AluY SINE Alu 1 311 0 391 264 97 14 chr17 52736026 52736170 -32702310 + MLT1J1 LTR MaLR 135 290 -156 243 250 133 0 chr17 52737983 52738043 -32700437 - L2 LINE L2 0 3272 3205 266 333 29 20 chr17 52738085 52738187 -32700293 + L2 LINE L2 3169 3271 -1 218 316 88 44 chr17 52740390 52740526 -32697954 + L2 LINE L2 2705 2846 -468 182 203 176 54 chr17 52740835 52740909 -32697571 + L2 LINE L2 3231 3313 0 403 297 8 23 chr17 52741074 52741202 -32697278 - MIR SINE MIR -114 148 23 290 179 107 0 chr17 52741309 52741365 -32697115 - MIR SINE MIR -84 178 117 353 331 64 19 chr17 52742095 52742252 -32696228 - MIR SINE MIR -79 183 20 345 296 35 35 chr17 52743068 52743210 -32695270 - MIR SINE MIR -3 259 118 29 0 0 0 chr17 52743453 52743482 -32694998 + AT_rich Low_complexity Low_complexity 1 29 0 204 97 0 0 chr17 52743888 52743919 -32694561 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 52744548 52744569 -32693911 + AT_rich Low_complexity Low_complexity 1 21 0 225 94 0 0 chr17 52747381 52747413 -32691067 + (CGG)n Simple_repeat Simple_repeat 3 34 0 311 330 98 57 chr17 52747505 52747872 -32690608 - L1M2 LINE L1 -5878 971 590 303 327 178 5 chr17 52748084 52748292 -32690188 - L1M2 LINE L1 -5927 922 679 621 100 0 0 chr17 52750078 52750168 -32688312 + (TTTC)n Simple_repeat Simple_repeat 2 91 0 189 300 0 20 chr17 52750373 52750423 -32688057 - L2 LINE L2 -18 3254 3206 437 352 60 5 chr17 52750717 52750916 -32687564 - MIR SINE MIR -28 234 25 257 271 17 0 chr17 52751146 52751205 -32687275 - L2 LINE L2 -28 3285 3226 2635 233 38 35 chr17 52752303 52753970 -32684510 + L1ME1 LINE L1 4493 6154 -12 5114 136 29 67 chr17 52754973 52755374 -32683106 + L1MA3 LINE L1 5228 5643 -662 353 60 20 0 chr17 52755374 52755424 -32683056 - MADE1 DNA Mariner -29 51 1 5114 136 29 67 chr17 52755424 52756093 -32682387 + L1MA3 LINE L1 5643 6305 0 24 0 0 0 chr17 52756166 52756190 -32682290 + AT_rich Low_complexity Low_complexity 1 24 0 243 197 76 0 chr17 52756260 52756326 -32682154 - MLT1D LTR MaLR 0 505 435 24 0 0 0 chr17 52756326 52756350 -32682130 + AT_rich Low_complexity Low_complexity 1 24 0 1337 238 136 2 chr17 52756496 52756900 -32681580 - MLT1D LTR MaLR -47 458 1 190 233 0 0 chr17 52757527 52757570 -32680910 + L2 LINE L2 3230 3272 0 309 328 25 25 chr17 52757687 52757806 -32680674 - MIR3 SINE MIR -48 160 42 213 143 24 0 chr17 52757991 52758033 -32680447 + (TG)n Simple_repeat Simple_repeat 2 44 0 1515 204 11 21 chr17 52759938 52760249 -32678231 + AluJo SINE Alu 1 308 0 999 253 231 13 chr17 52760704 52761315 -32677165 - LTR50 LTR ERVL -20 775 18 2263 97 0 10 chr17 52761315 52761614 -32676866 + AluSq SINE Alu 1 296 -17 999 253 231 13 chr17 52761614 52761638 -32676842 - LTR50 LTR ERVL -777 18 1 283 346 69 25 chr17 52762298 52762500 -32675980 + MIR SINE MIR 8 218 -44 304 259 72 114 chr17 52762876 52763069 -32675411 + MIR SINE MIR 35 219 -43 421 301 17 69 chr17 52763131 52763304 -32675176 + MIR SINE MIR 28 191 -71 203 333 0 0 chr17 52763326 52763389 -32675091 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 258 194 0 0 chr17 52763392 52763454 -32675026 + (TA)n Simple_repeat Simple_repeat 1 62 0 308 287 0 11 chr17 52764626 52764720 -32673760 + MARNA DNA Mariner 357 449 -137 223 429 0 0 chr17 52764810 52764929 -32673551 - L3 LINE CR1 -77 1500 1382 468 51 0 0 chr17 52764933 52764992 -32673488 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 2086 99 0 4 chr17 52765007 52765279 -32673201 - AluSq SINE Alu -42 271 1 2133 113 7 3 chr17 52765324 52765615 -32672865 - AluSc SINE Alu -17 292 1 219 283 50 0 chr17 52765752 52765812 -32672668 - L3 LINE CR1 -471 1106 1044 204 239 0 0 chr17 52765813 52765859 -32672621 + (TATG)n Simple_repeat Simple_repeat 1 46 0 1036 305 86 40 chr17 52765887 52766704 -32671776 - L2 LINE L2 0 3313 2460 413 243 90 35 chr17 52766835 52766979 -32671501 + MIR3 SINE MIR 26 177 -31 479 322 17 17 chr17 52767947 52768124 -32670356 - MER5A DNA MER1_type 0 189 13 2037 67 42 80 chr17 52768394 52768706 -32669774 - AluY SINE Alu -11 300 1 21 95 0 0 chr17 52768779 52768842 -32669638 + AT_rich Low_complexity Low_complexity 1 63 0 314 256 123 21 chr17 52769393 52769587 -32668893 - L1MC5 LINE L1 -977 6837 6608 183 80 0 0 chr17 52769588 52769613 -32668867 + (TATG)n Simple_repeat Simple_repeat 3 27 0 419 311 185 44 chr17 52769744 52770339 -32668141 - L1MC4a LINE L1 -1299 6509 5831 184 129 65 145 chr17 52770579 52770641 -32667839 - L2 LINE L2 0 3272 3216 240 299 172 19 chr17 52771521 52771678 -32666802 + MIR SINE MIR 2 182 -80 24 0 0 0 chr17 52772455 52772479 -32666001 + AT_rich Low_complexity Low_complexity 1 24 0 730 289 51 31 chr17 52772497 52772753 -32665727 - MIR SINE MIR 0 262 2 256 316 152 12 chr17 52772968 52773139 -32665341 - MIR3 SINE MIR -9 199 5 1884 217 81 63 chr17 52773671 52774285 -32664195 + MLT1E2 LTR MaLR 2 626 0 1828 133 15 4 chr17 52774537 52774801 -32663679 + AluSx SINE Alu 1 267 -45 7839 17 0 0 chr17 52774801 52775975 -32662505 + L1PA2 LINE L1 4982 6155 0 2084 139 18 21 chr17 52776872 52777209 -32661271 - MER1B DNA MER1_type -1 336 1 441 278 42 47 chr17 52777912 52778124 -32660356 - L1MDa LINE L1 -3953 2176 1966 206 128 26 0 chr17 52778128 52778167 -32660313 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 3860 176 21 20 chr17 52778589 52779356 -32659124 - L1MB7 LINE L1 -18 6166 5399 1325 223 39 3 chr17 52779354 52779691 -32658789 - L1MB7 LINE L1 -1483 4663 4315 * 354 270 95 41 chr17 52779821 52780136 -32658344 - L1MDa LINE L1 -4892 1227 896 860 340 111 22 chr17 52780233 52780924 -32657556 - L1MDa LINE L1 -5366 753 1 713 283 62 72 chr17 52782254 52782724 -32655756 + L1MEd LINE L1 676 1140 -4979 215 375 35 7 chr17 52783750 52783894 -32654586 + MIR SINE MIR 49 196 -66 342 365 35 0 chr17 52784123 52784268 -32654212 + L2 LINE L2 3123 3272 0 441 240 27 60 chr17 52785014 52785102 -32653378 - L2 LINE L2 -528 2786 2703 1096 226 9 0 chr17 52785102 52785319 -32653161 - MER20 DNA MER1_type 0 219 1 441 240 27 60 chr17 52785319 52785380 -32653100 - L2 LINE L2 -611 2703 2642 2002 131 18 42 chr17 52785401 52785783 -32652697 + THE1C LTR MaLR 3 375 0 3413 176 50 43 chr17 52786270 52787363 -32651117 + LTR49-int LTR ERV1 4927 6146 -452 1010 169 11 13 chr17 52787381 52787697 -32650783 + LTR47A LTR ERVL 2 366 -86 1888 224 54 39 chr17 52787743 52788519 -32649961 - L1ME1 LINE L1 -242 5924 5149 2192 150 14 0 chr17 52788541 52788908 -32649572 - L1PB4 LINE L1 -3 6153 5782 181 73 24 49 chr17 52788915 52788956 -32649524 + (CATAT)n Simple_repeat Simple_repeat 1 40 0 1801 194 33 65 chr17 52790108 52790399 -32648081 - L1MB7 LINE L1 -1988 4158 3884 2931 157 20 70 chr17 52790399 52791043 -32647437 - LTR9 LTR ERV1 0 612 1 1801 194 33 65 chr17 52791043 52791200 -32647280 - L1MB7 LINE L1 -2262 3884 3724 * 4242 173 60 28 chr17 52791195 52791861 -32646619 + L1MA10 LINE L1 4169 4812 -1377 2301 94 7 0 chr17 52791861 52792160 -32646320 + AluY SINE Alu 1 301 -10 4242 173 60 28 chr17 52792160 52793194 -32645286 + L1MA10 LINE L1 4812 5936 -253 830 265 72 7 chr17 52793207 52793498 -32644982 + MER2 DNA MER2_type 21 330 -15 1599 203 40 3 chr17 52793505 52793727 -32644753 + L1MA10 LINE L1 5938 6181 -153 365 86 17 0 chr17 52793727 52793785 -32644695 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 1599 203 40 3 chr17 52793785 52793937 -32644543 + L1MA10 LINE L1 6181 6326 -8 296 274 41 102 chr17 52795168 52795365 -32643115 + L2 LINE L2 2609 2793 -521 456 246 48 32 chr17 52795483 52795649 -32642831 - MIR SINE MIR -68 140 29 1234 302 37 22 chr17 52795896 52796306 -32642174 + LTR16C LTR ERVL 74 489 -2 389 307 49 56 chr17 52796559 52796963 -32641517 + L2 LINE L2 1468 1955 -1359 241 208 0 0 chr17 52797000 52797048 -32641432 + L2 LINE L2 1910 1957 -1357 397 326 73 80 chr17 52797134 52797834 -32640646 + L2 LINE L2 1978 2672 -642 186 368 24 84 chr17 52798066 52798316 -32640164 + L2 LINE L2 3030 3264 -8 432 302 30 24 chr17 52798438 52798607 -32639873 + MIR SINE MIR 33 202 -60 646 287 107 24 chr17 52798707 52799090 -32639390 - MLT1L LTR MaLR -2 613 199 25 0 0 0 chr17 52800149 52800174 -32638306 + AT_rich Low_complexity Low_complexity 1 25 0 194 103 0 51 chr17 52800358 52800397 -32638083 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 27 49 0 0 chr17 52800860 52800901 -32637579 + AT_rich Low_complexity Low_complexity 1 41 0 212 282 200 0 chr17 52801076 52801161 -32637319 - MIR SINE MIR -91 117 16 261 297 129 20 chr17 52801319 52801420 -32637060 + MIR SINE MIR 12 123 -139 * 307 290 0 43 chr17 52801414 52801507 -32636973 + L2 LINE L2 3206 3294 -19 2365 132 17 3 chr17 52801898 52802253 -32636227 - THE1B LTR MaLR -4 360 1 226 0 0 56 chr17 52802262 52802298 -32636182 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2138 116 0 0 chr17 52803183 52803475 -32635005 + AluSx SINE Alu 1 292 -20 181 163 102 20 chr17 52804233 52804282 -32634198 - L2 LINE L2 -1491 1823 1771 324 0 0 0 chr17 52804615 52804651 -32633829 + (CA)n Simple_repeat Simple_repeat 2 37 0 1878 212 32 34 chr17 52804760 52805227 -32633253 + MLT1C LTR MaLR 2 467 0 24 0 0 0 chr17 52805316 52805340 -32633140 + AT_rich Low_complexity Low_complexity 1 24 0 380 331 94 0 chr17 52806044 52806171 -32632309 + L2 LINE L2 3134 3272 0 255 363 20 11 chr17 52808074 52808180 -32630300 - MIR SINE MIR -87 121 16 229 412 0 0 chr17 52808374 52808459 -32630021 - L2 LINE L2 -2 3270 3186 509 289 141 15 chr17 52808578 52808974 -32629506 + L2 LINE L2 2756 3192 -121 183 333 109 14 chr17 52809034 52809181 -32629299 - MIR SINE MIR -6 256 96 1694 143 29 18 chr17 52809657 52809817 -32628663 - AluSq SINE Alu -18 295 129 297 0 0 0 chr17 52809817 52809850 -32628630 + (CA)n Simple_repeat Simple_repeat 2 34 0 1694 143 29 18 chr17 52809850 52809969 -32628511 - AluSq SINE Alu -184 129 13 1894 85 0 0 chr17 52810101 52810337 -32628143 + AluY SINE Alu 69 304 -7 536 253 97 53 chr17 52810371 52810625 -32627855 + MIR SINE MIR 2 262 0 603 244 7 30 chr17 52811334 52811469 -32627011 - L2 LINE L2 0 3272 3141 1606 176 45 3 chr17 52811990 52812068 -32626412 - MER34B LTR ERV1 0 565 492 2201 124 0 16 chr17 52812068 52812383 -32626097 + AluSx SINE Alu 3 312 0 1606 176 45 3 chr17 52812383 52812617 -32625863 - MER34B LTR ERV1 -73 492 240 476 158 0 125 chr17 52812672 52812792 -32625688 - MER34B LTR ERV1 -450 115 11 260 136 45 0 chr17 52815285 52815329 -32623151 - L2 LINE L2 0 3313 3268 4079 130 9 2 chr17 52815408 52816038 -32622442 - MER41B LTR ERV1 0 635 1 207 307 27 13 chr17 52816382 52816457 -32622023 + L2 LINE L2 3234 3309 -4 803 106 0 0 chr17 52818350 52818463 -32620017 - AluSg/x SINE Alu -14 296 184 357 248 184 44 chr17 52819088 52819375 -32619105 - MLT1J LTR MaLR -147 303 3 188 315 152 55 chr17 52819479 52819933 -32618547 + L2 LINE L2 1731 2228 -1086 183 379 142 19 chr17 52820577 52820788 -32617692 + MIR SINE MIR 20 256 -6 212 277 0 0 chr17 52821766 52821813 -32616667 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 201 284 0 32 chr17 52821903 52821998 -32616482 + (TA)n Simple_repeat Simple_repeat 2 93 0 1213 203 47 43 chr17 52822005 52822306 -32616174 - MLT2C1 LTR ERVL -95 302 1 23 0 0 0 chr17 52822469 52822492 -32615988 + AT_rich Low_complexity Low_complexity 1 23 0 1662 220 8 14 chr17 52822507 52822871 -32615609 + MLT1A1 LTR MaLR 4 365 0 289 326 53 15 chr17 52822992 52823124 -32615356 - MIR SINE MIR -56 206 70 211 310 5 60 chr17 52823720 52823834 -32614646 + MIR SINE MIR 29 131 -77 368 296 138 7 chr17 52825533 52825685 -32612795 + MLT1H LTR MaLR 8 179 -370 1701 174 28 3 chr17 52825685 52826012 -32612468 - MER93b LTR ERV1 0 373 39 235 118 0 0 chr17 52826008 52826042 -32612438 + MLT1H1 LTR MaLR 513 546 -9 * 305 348 28 0 chr17 52826971 52827112 -32611368 - L2 LINE L2 -212 3060 2916 1756 157 7 11 chr17 52828420 52828707 -32609773 - AluJb SINE Alu -16 296 11 560 336 21 25 chr17 52828791 52829029 -32609451 + MIR SINE MIR 5 241 -21 386 286 99 46 chr17 52830446 52830708 -32607772 - MLT1L LTR MaLR -191 424 149 833 276 28 0 chr17 52830709 52830923 -32607557 - MER58A DNA MER1_type 0 224 5 396 279 29 0 chr17 52830957 52831061 -32607419 + MER94 DNA DNA 2 108 -26 903 298 67 26 chr17 52831210 52831670 -32606810 - L2 LINE L2 -366 2948 2470 570 279 101 53 chr17 52831711 52831958 -32606522 - MIR SINE MIR -3 259 1 233 336 47 28 chr17 52832199 52832306 -32606174 + L2 LINE L2 3148 3256 -16 1841 227 11 65 chr17 52832541 52833096 -32605384 - L1MC4a LINE L1 0 7808 7284 268 338 56 56 chr17 52834731 52834962 -32603518 + L2 LINE L2 456 686 -2628 740 356 63 20 chr17 52835036 52835531 -32602949 + L2 LINE L2 679 1194 -2120 1316 321 39 15 chr17 52835550 52836135 -32602345 + L2 LINE L2 1854 2452 -862 202 250 23 0 chr17 52836133 52836177 -32602303 + L2 LINE L2 3015 3059 -254 * 225 305 181 29 chr17 52836212 52836317 -32602163 + L2 LINE L2 3190 3310 -3 323 218 36 9 chr17 52836721 52836831 -32601649 + (TA)n Simple_repeat Simple_repeat 1 113 0 2419 153 26 0 chr17 52837095 52837512 -32600968 + MSTA LTR MaLR 1 428 0 967 280 83 78 chr17 52837541 52837770 -32600710 + HAL1 LINE L1 149 375 -2132 2033 108 3 17 chr17 52837770 52838066 -32600414 + AluSx SINE Alu 11 302 -10 967 280 83 78 chr17 52838066 52838628 -32599852 + HAL1 LINE L1 375 944 -1563 3093 237 89 53 chr17 52838696 52840004 -32598476 + HAL1 LINE L1 1153 2507 0 323 274 59 46 chr17 52840049 52840202 -32598278 + L1ME LINE L1 4390 4544 -1602 468 277 131 77 chr17 52841032 52841407 -32597073 - HAL1 LINE L1 -2112 395 1 23 0 0 0 chr17 52841688 52841711 -32596769 + AT_rich Low_complexity Low_complexity 1 23 0 245 267 186 19 chr17 52841775 52842033 -32596447 + L1ME LINE L1 5564 5864 -257 267 137 0 78 chr17 52842284 52842335 -32596145 + L2 LINE L2 3266 3312 -1 1691 151 38 10 chr17 52843129 52843421 -32595059 - AluJb SINE Alu -12 300 1 474 306 59 22 chr17 52843573 52843795 -32594685 + MIR SINE MIR 15 244 -18 28 48 0 0 chr17 52844525 52844567 -32593913 + AT_rich Low_complexity Low_complexity 1 42 0 235 332 50 96 chr17 52845189 52845409 -32593071 + L2 LINE L2 3060 3269 -3 402 294 76 67 chr17 52845462 52845894 -32592586 - L1ME LINE L1 -307 5814 5379 560 129 11 11 chr17 52845966 52846059 -32592421 + MER4B-int LTR ERV1 4590 4682 -2076 2022 127 51 6 chr17 52846064 52846376 -32592104 - LTR9B LTR ERV1 -6 638 313 1901 179 100 31 chr17 52846376 52846834 -32591646 + LTR2B LTR ERV1 1 490 0 * 2031 112 35 10 chr17 52846834 52847142 -32591338 - LTR9B LTR ERV1 -328 316 1 3519 150 14 39 chr17 52847142 52847802 -32590678 + MER4B-int LTR ERV1 4678 5320 -1438 483 132 62 15 chr17 52847912 52848387 -32590093 + (TA)n Simple_repeat Simple_repeat 1 497 0 9647 173 25 42 chr17 52848499 52849255 -32589225 - L1P5 LINE L1 -359 5797 5029 2087 135 23 49 chr17 52849255 52849640 -32588840 - THE1C LTR MaLR 0 375 1 9647 173 25 42 chr17 52849640 52851608 -32586872 - L1P5 LINE L1 -1127 5029 3117 1278 300 42 13 chr17 52852759 52853291 -32585189 - HERV16 LTR ERVL -2506 2490 1930 1074 327 84 9 chr17 52853457 52854005 -32584475 - HERV16 LTR ERVL -4135 861 273 485 312 117 4 chr17 52854265 52854623 -32583857 - LTR16A LTR ERVL 0 450 8 243 0 0 0 chr17 52854888 52854915 -32583565 + (CA)n Simple_repeat Simple_repeat 2 28 0 647 270 214 43 chr17 52855969 52856343 -32582137 + L2 LINE L2 2807 3244 -69 225 65 0 0 chr17 52856775 52856806 -32581674 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 273 303 99 28 chr17 52856814 52856956 -32581524 - MIR SINE MIR -8 254 103 491 276 66 99 chr17 52857332 52857723 -32580757 + LTR16A1 LTR ERVL 98 455 -2 2021 121 11 4 chr17 52858015 52858338 -32580142 + AluSc SINE Alu 1 325 0 226 335 68 119 chr17 52858376 52858669 -32579811 - L2 LINE L2 -21 3251 2974 281 160 56 0 chr17 52861131 52861256 -32577224 + (TA)n Simple_repeat Simple_repeat 1 132 0 191 130 0 22 chr17 52861257 52861303 -32577177 + (GA)n Simple_repeat Simple_repeat 2 46 0 1297 190 35 28 chr17 52861304 52861593 -32576887 - MLT2D LTR ERVL -123 291 1 1975 269 71 3 chr17 52861724 52862344 -32576136 - L1MC4 LINE L1 -143 7899 7238 989 266 146 17 chr17 52862358 52862765 -32575715 - L1MC4 LINE L1 -980 7062 6584 2111 130 3 19 chr17 52862765 52863080 -32575400 - AluSx SINE Alu -2 310 1 989 266 146 17 chr17 52863080 52863146 -32575334 - L1MC4 LINE L1 -1458 6584 6528 329 272 68 34 chr17 52863460 52863607 -32574873 - MIR SINE MIR 0 262 111 222 292 90 56 chr17 52863804 52863893 -32574587 + MIR SINE MIR 8 99 -163 319 68 34 34 chr17 52864026 52864085 -32574395 + (GAAA)n Simple_repeat Simple_repeat 3 61 0 1140 184 14 9 chr17 52864097 52864314 -32574166 - MLT2B3 LTR ERVL -334 220 3 258 285 41 81 chr17 52864580 52864703 -32573777 - MER5A DNA MER1_type 0 189 72 3036 23 0 0 chr17 52864999 52865350 -32573130 - L1P2 LINE L1 -1671 4475 4125 * 7233 48 7 0 chr17 52865349 52866415 -32572065 + L1P2 LINE L1 4474 5543 -611 2305 55 48 0 chr17 52866515 52866806 -32571674 + AluY SINE Alu 1 305 -6 264 254 0 0 chr17 52866874 52866933 -32571547 + GA-rich Low_complexity Low_complexity 3 61 0 283 269 17 17 chr17 52866933 52867108 -32571372 + HAL1b LINE L1 636 810 -538 2401 67 0 10 chr17 52867839 52868152 -32570328 + AluY SINE Alu 1 310 -1 266 359 8 8 chr17 52868162 52868293 -32570187 + MLT1L LTR MaLR 420 550 -65 246 288 0 0 chr17 52868395 52868454 -32570026 - L2 LINE L2 0 3272 3214 1967 119 0 53 chr17 52869568 52869888 -32568592 + AluSx SINE Alu 1 303 -9 1948 81 24 54 chr17 52870108 52870403 -32568077 - AluSg SINE Alu -16 294 9 487 357 25 8 chr17 52870514 52870755 -32567725 + MLT1L LTR MaLR 30 274 -341 289 261 99 42 chr17 52870875 52871017 -32567463 + MLT1L LTR MaLR 458 607 -8 379 301 23 60 chr17 52871047 52871180 -32567300 - L2 LINE L2 0 3272 3145 426 225 0 0 chr17 52871202 52871291 -32567189 + L1PB4 LINE L1 6056 6144 -12 5874 59 4 0 chr17 52871295 52872038 -32566442 + L1PA7 LINE L1 5405 6150 -4 1509 171 4 41 chr17 52872114 52872383 -32566097 - AluJo SINE Alu -18 294 36 1217 241 52 71 chr17 52872383 52872806 -32565674 + L1MD2 LINE L1 5923 6337 -22 2246 112 0 0 chr17 52872937 52873232 -32565248 - AluSq SINE Alu -18 295 1 1281 310 48 30 chr17 52873272 52873837 -32564643 + HAL1 LINE L1 110 684 -1823 393 286 158 28 chr17 52873853 52874200 -32564280 - MLT1G1 LTR MaLR -10 545 126 1300 244 171 71 chr17 52874276 52875343 -32563137 + HAL1 LINE L1 703 1876 -631 776 276 95 55 chr17 52875410 52875987 -32562493 + HAL1 LINE L1 1688 2287 -220 22 0 0 0 chr17 52876044 52876066 -32562414 + AT_rich Low_complexity Low_complexity 1 22 0 299 375 119 12 chr17 52876230 52876481 -32561999 - L2 LINE L2 -337 2977 2700 1540 186 10 21 chr17 52876500 52876790 -32561690 - AluJo SINE Alu -25 287 1 494 274 173 98 chr17 52877185 52877652 -32560828 - L2 LINE L2 -1 3312 2811 317 379 30 23 chr17 52877714 52877978 -32560502 + L2 LINE L2 2593 2858 -456 2041 111 102 9 chr17 52878778 52879121 -32559359 + THE1C LTR MaLR 1 375 0 402 354 27 14 chr17 52879275 52879422 -32559058 - MIR3 SINE MIR -44 164 16 433 321 57 93 chr17 52880016 52880383 -32558097 + L2 LINE L2 2910 3263 -9 252 359 154 18 chr17 52880987 52881207 -32557273 + MIR SINE MIR 2 251 -11 480 304 31 70 chr17 52881512 52881769 -32556711 + MIR SINE MIR 10 256 -6 206 288 27 14 chr17 52882048 52882121 -32556359 - MIR3 SINE MIR -48 160 87 338 332 148 51 chr17 52883589 52883981 -32554499 + L2 LINE L2 2884 3313 0 22 0 0 0 chr17 52884091 52884113 -32554367 + AT_rich Low_complexity Low_complexity 1 22 0 579 113 0 0 chr17 52884424 52884504 -32553976 - AluSg/x SINE Alu -21 288 209 261 294 105 56 chr17 52885908 52886460 -32552020 + L1ME LINE L1 3784 4362 -1784 24 67 0 0 chr17 52886460 52886505 -32551975 + AT_rich Low_complexity Low_complexity 1 45 0 321 350 51 15 chr17 52886628 52887082 -32551398 + L1ME LINE L1 4741 5210 -936 1912 167 48 32 chr17 52887133 52887679 -32550801 + MLT2A2 LTR ERVL 1 554 0 255 277 0 15 chr17 52887714 52887779 -32550701 + LTR67 LTR ERVL 42 105 -452 561 268 82 27 chr17 52887906 52888126 -32550354 + LTR67 LTR ERVL 326 557 0 571 257 86 23 chr17 52888128 52888432 -32550048 + L1ME LINE L1 5255 5577 -585 2135 71 17 14 chr17 52889404 52889701 -32548779 + L1PA13 LINE L1 5861 6158 -5 980 204 18 49 chr17 52890557 52890782 -32547698 + MER20 DNA MER1_type 2 219 0 6405 120 1 1 chr17 52890848 52891815 -32546665 - THE1A-int LTR MaLR -613 967 1 2581 94 14 0 chr17 52891815 52892165 -32546315 - THE1A LTR MaLR 0 355 1 576 288 47 39 chr17 52892369 52892602 -32545878 - MLT1H1 LTR MaLR 0 555 321 1059 190 18 49 chr17 52892649 52892875 -32545605 - MER20 DNA MER1_type 0 219 1 419 304 18 6 chr17 52892911 52893103 -32545377 - MLT1H1 LTR MaLR -312 237 1 608 288 36 24 chr17 52893218 52893468 -32545012 + MIR SINE MIR 10 262 0 1841 136 68 4 chr17 52893884 52894164 -32544316 + AluSq SINE Alu 1 298 -15 42 48 0 0 chr17 52894191 52894254 -32544226 + AT_rich Low_complexity Low_complexity 1 63 0 3995 194 15 31 chr17 52895117 52896152 -32542328 + L1MA9 LINE L1 5180 6198 -114 342 299 0 10 chr17 52897410 52897507 -32540973 - MLT1J2 LTR MaLR -291 159 64 1706 172 44 21 chr17 52897797 52898135 -32540345 + MER7A DNA MER2_type 2 345 -1 281 222 0 11 chr17 52899115 52899205 -32539275 + (TA)n Simple_repeat Simple_repeat 2 90 0 658 248 0 0 chr17 52899987 52900128 -32538352 + MIR3 SINE MIR 37 177 -31 503 307 74 6 chr17 52900691 52900854 -32537626 - MER5A DNA MER1_type -7 182 9 232 255 0 78 chr17 52901000 52901102 -32537378 + MIR SINE MIR 119 212 -50 1391 251 30 16 chr17 52901410 52901777 -32536703 + L1MD3 LINE L1 6497 6868 -1127 206 176 20 0 chr17 52901830 52901881 -32536599 + (TA)n Simple_repeat Simple_repeat 1 52 0 282 248 83 0 chr17 52901884 52901993 -32536487 + L1MD3 LINE L1 6897 7014 -981 26 0 0 0 chr17 52902002 52902028 -32536452 + AT_rich Low_complexity Low_complexity 1 26 0 752 254 70 5 chr17 52902307 52902520 -32535960 + Charlie1 DNA MER1_type 1 227 -2534 560 217 7 0 chr17 52902516 52902654 -32535826 + Charlie1 DNA MER1_type 2622 2760 -1 * 21 0 0 0 chr17 52903360 52903381 -32535099 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr17 52903802 52903829 -32534651 + AT_rich Low_complexity Low_complexity 1 27 0 1271 133 0 5 chr17 52904742 52904952 -32533528 - L1PB1 LINE L1 -2 6149 5941 6778 209 16 17 chr17 52904952 52905797 -32532683 + L1 LINE L1 2302 3147 -2999 1956 149 76 15 chr17 52905797 52906140 -32532340 - THE1B LTR MaLR 0 364 1 11366 98 9 9 chr17 52906140 52907720 -32530760 - THE1B-int LTR MaLR 0 1580 1 1969 158 73 15 chr17 52907720 52908062 -32530418 - THE1B LTR MaLR 0 364 3 6778 209 16 17 chr17 52908062 52908947 -32529533 + L1 LINE L1 3144 4031 -2115 306 247 0 0 chr17 52909970 52910063 -32528417 + CT-rich Low_complexity Low_complexity 3 95 0 297 51 0 0 chr17 52910309 52910348 -32528132 + (CA)n Simple_repeat Simple_repeat 2 40 0 2563 64 0 3 chr17 52910756 52911068 -32527412 + AluY SINE Alu 1 311 0 202 250 29 29 chr17 52912071 52912139 -32526341 + MIR SINE MIR 46 113 -149 25 0 0 0 chr17 52912170 52912195 -32526285 + AT_rich Low_complexity Low_complexity 1 25 0 348 83 0 0 chr17 52912292 52912340 -32526140 + (TG)n Simple_repeat Simple_repeat 2 49 0 536 132 28 28 chr17 52913645 52913751 -32524729 - L1PA8 LINE L1 0 6172 6067 3267 53 17 0 chr17 52913812 52914227 -32524253 - L1PA5 LINE L1 0 6154 5733 600 256 139 17 chr17 52914593 52914823 -32523657 + MIR SINE MIR 5 262 0 623 343 25 13 chr17 52915269 52915508 -32522972 - MIR SINE MIR -7 255 14 2049 157 0 0 chr17 52916124 52916429 -32522051 + AluSx SINE Alu 1 305 -7 330 223 83 33 chr17 52916949 52917070 -32521410 - MIR SINE MIR 0 262 136 2207 108 13 0 chr17 52917103 52917408 -32521072 - AluSc SINE Alu 0 309 1 1996 202 42 0 chr17 52917426 52917877 -32520603 - L1MD3 LINE L1 -9 7986 7517 1143 180 4 33 chr17 52917876 52918129 -32520351 + L1MD3 LINE L1 7009 7255 -740 * 1828 178 58 34 chr17 52918129 52918544 -32519936 + MSTB LTR MaLR 2 426 0 1143 180 4 33 chr17 52918544 52918562 -32519918 + L1MD3 LINE L1 7255 7272 -723 239 233 45 105 chr17 52918564 52918668 -32519812 + MLT1F1 LTR MaLR 1 97 -470 1699 86 27 0 chr17 52918668 52918888 -32519592 - AluY SINE Alu -3 308 83 239 233 45 105 chr17 52918888 52918916 -32519564 + MLT1F1 LTR MaLR 97 125 -442 317 173 185 0 chr17 52918916 52918997 -32519483 + L1MD3 LINE L1 7404 7499 -496 952 204 15 44 chr17 52919854 52920060 -32518420 - AluJo SINE Alu -25 287 88 494 296 81 27 chr17 52921671 52921857 -32516623 - MIR SINE MIR -32 230 35 2563 51 0 10 chr17 52922105 52922419 -32516061 + AluY SINE Alu 1 311 0 368 292 99 31 chr17 52922640 52922801 -32515679 - MIR SINE MIR -56 206 35 2363 48 3 10 chr17 52923049 52923344 -32515136 + AluY SINE Alu 1 293 -18 37 23 0 0 chr17 52923736 52923780 -32514700 + AT_rich Low_complexity Low_complexity 1 44 0 1347 212 60 7 chr17 52923784 52923947 -32514533 - AluJo SINE Alu -14 298 112 222 37 0 0 chr17 52923947 52923974 -32514506 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1347 212 60 7 chr17 52923974 52924093 -32514387 - AluJo SINE Alu -200 112 1 282 231 10 116 chr17 52924361 52924560 -32513920 + HAL1b LINE L1 91 268 -1080 2621 19 16 3 chr17 52924616 52924924 -32513556 + L1PA7 LINE L1 5830 6141 -13 1546 169 30 55 chr17 52925213 52925575 -32512905 - MLT1B LTR MaLR -37 353 1 309 262 40 71 chr17 52925641 52925767 -32512713 + L1MC4a LINE L1 5791 5912 -1896 2346 99 0 0 chr17 52925963 52926255 -32512225 + AluSx SINE Alu 1 292 -20 281 321 97 72 chr17 52926448 52926685 -32511795 - L2 LINE L2 -4 3268 3026 188 83 0 56 chr17 52927450 52927486 -32510994 + (GGA)n Simple_repeat Simple_repeat 2 35 0 18889 87 2 7 chr17 52928304 52931530 -32506950 - L1P LINE L1 -2428 3718 525 984 193 5 16 chr17 52931537 52931724 -32506756 + AluJb SINE Alu 114 298 -14 3182 173 63 7 chr17 52932880 52933451 -32505029 + LTR26 LTR ERV1 1 603 0 428 317 106 41 chr17 52933725 52934094 -32504386 - L2 LINE L2 -613 2701 2309 21 36 0 0 chr17 52934413 52934441 -32504039 + AT_rich Low_complexity Low_complexity 1 28 0 369 338 90 21 chr17 52934677 52934911 -32503569 + MIR SINE MIR 6 255 -7 3404 259 70 27 chr17 52935668 52937096 -32501384 + L1M4 LINE L1 2521 4010 -2136 1846 37 0 5 chr17 52937292 52937510 -32500970 + HERVK LTR ERVK 6932 7148 -95 477 64 11 160 chr17 52937510 52937604 -32500876 + SVA Other Other 857 936 -450 8631 46 0 0 chr17 52937604 52938573 -32499907 + LTR5 LTR ERVK 1 969 0 6461 89 0 0 chr17 52938573 52939400 -32499080 - HERVK11 LTR ERVK -3363 4590 3764 1065 101 7 0 chr17 52939501 52939639 -32498841 - AluSq/x SINE Alu -174 139 1 1469 182 0 120 chr17 52939640 52940014 -32498466 + MLT1A1 LTR MaLR 37 365 0 189 0 0 0 chr17 52940282 52940303 -32498177 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1915 136 3 3 chr17 52940307 52940593 -32497887 - AluJb SINE Alu -26 286 1 26 0 0 0 chr17 52940702 52940728 -32497752 + AT_rich Low_complexity Low_complexity 1 26 0 234 281 45 22 chr17 52940838 52940927 -32497553 - MIR SINE MIR -157 105 15 453 270 61 49 chr17 52940937 52941100 -32497380 + L2 LINE L2 3106 3270 -2 984 205 78 37 chr17 52941178 52941446 -32497034 - MLT2B2 LTR ERVL 0 515 237 212 297 46 69 chr17 52941664 52941839 -32496641 - L2 LINE L2 -463 2851 2681 5849 26 3 5 chr17 52942329 52942981 -32495499 - L1PA3 LINE L1 0 6155 5505 25574 29 2 0 chr17 52942981 52946011 -32492469 - L1P LINE L1 -822 5333 2295 1663 179 25 15 chr17 52946111 52946435 -32492045 + L1MB7 LINE L1 5858 6184 0 376 202 93 54 chr17 52948116 52948245 -32490235 - L1M4 LINE L1 -2451 3695 3562 1116 122 0 58 chr17 52948577 52948749 -32489731 - AluSx SINE Alu -150 162 1 476 226 7 36 chr17 52948749 52948886 -32489594 - L1M4 LINE L1 -821 5325 5193 261 303 0 0 chr17 52948886 52948962 -32489518 + MIR SINE MIR 79 154 -108 464 263 11 0 chr17 52949196 52949291 -32489189 - MER5A DNA MER1_type -84 105 10 368 203 0 0 chr17 52949292 52949356 -32489124 + MSTB-int LTR MaLR 358 421 -1230 5127 184 24 20 chr17 52949367 52950324 -32488156 + MSTB-int LTR MaLR 691 1651 0 2467 141 102 3 chr17 52950324 52950708 -32487772 + MSTB LTR MaLR 1 422 -4 284 145 0 16 chr17 52951433 52951495 -32486985 + (CA)n Simple_repeat Simple_repeat 2 62 0 231 224 15 90 chr17 52952738 52952805 -32485675 + MIR SINE MIR 16 77 -131 2083 120 10 3 chr17 52952859 52953158 -32485322 - AluSg SINE Alu -9 301 1 2510 59 3 13 chr17 52954033 52954339 -32484141 - AluY SINE Alu -8 303 1 561 279 7 0 chr17 52955474 52955628 -32482852 + AluSq SINE Alu 136 290 -23 2100 231 39 17 chr17 52955632 52956268 -32482212 + L1M4 LINE L1 4186 4835 -1311 3336 174 140 35 chr17 52956270 52957042 -32481438 - MER21B LTR ERV1 0 931 1 742 260 16 0 chr17 52957061 52957253 -32481227 + L1M4 LINE L1 4899 5093 -1053 203 175 0 0 chr17 52957253 52957293 -32481187 + T-rich Low_complexity Low_complexity 3 42 0 1027 117 0 0 chr17 52957310 52957447 -32481033 - AluJb SINE Alu -171 141 5 844 197 36 10 chr17 52957482 52957675 -32480805 + L1M4 LINE L1 5101 5298 -848 591 219 6 83 chr17 52957873 52958042 -32480438 + MER52A LTR ERV1 1078 1233 -522 536 266 31 79 chr17 52958379 52958608 -32479872 + MER52A LTR ERV1 1237 1454 -301 238 182 8 22 chr17 52958619 52958752 -32479728 + AluJb SINE Alu 58 279 -23 2928 132 5 2 chr17 52958996 52959442 -32479038 - L1MA5 LINE L1 0 6300 5854 1465 158 46 25 chr17 52959620 52959904 -32478576 + THE1C LTR MaLR 1 290 -85 336 342 42 8 chr17 52960135 52960255 -32478225 - MIR SINE MIR -85 177 54 704 226 36 12 chr17 52960313 52960481 -32477999 - L3 LINE CR1 -7 1570 1399 1848 129 3 64 chr17 52961303 52961614 -32476866 - AluSx SINE Alu -20 292 1 465 250 47 21 chr17 52961614 52961751 -32476729 - MIR SINE MIR -68 140 50 4538 110 3 3 chr17 52961866 52962468 -32476012 + LTR43 LTR ERV1 1 602 0 849 181 141 36 chr17 52962653 52962902 -32475578 + ORSL DNA AcHobo 1 275 0 292 258 40 147 chr17 52963179 52963227 -32475253 - MIR SINE MIR -76 186 135 1218 229 5 0 chr17 52963227 52963450 -32475030 + MER58A DNA MER1_type 1 224 0 292 258 40 147 chr17 52963450 52963599 -32474881 - MIR SINE MIR -127 135 10 258 350 38 51 chr17 52964423 52964580 -32473900 - MIR3 SINE MIR -52 156 2 459 278 119 7 chr17 52965322 52965473 -32473007 - MIR3 SINE MIR -1 207 40 214 184 0 0 chr17 52966044 52966092 -32472388 - MIR SINE MIR -109 153 107 386 273 195 24 chr17 52966323 52966528 -32471952 + MIR SINE MIR 20 259 -3 290 366 46 7 chr17 52966532 52966685 -32471795 - MIR SINE MIR -49 213 55 185 321 119 9 chr17 52967565 52967674 -32470806 - MIR3 SINE MIR -73 135 15 746 203 13 6 chr17 52968079 52968237 -32470243 - L1MC/D LINE L1 -766 5593 5435 360 211 14 164 chr17 52968496 52968704 -32469776 - L1MC/D LINE L1 -2029 5779 5603 683 240 0 0 chr17 52968704 52968833 -32469647 - FLAM_A SINE Alu -4 129 1 315 71 0 0 chr17 52968848 52968890 -32469590 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1067 171 130 82 chr17 52968903 52969172 -32469308 - AluJo SINE Alu -30 282 1 691 243 68 54 chr17 52969174 52969390 -32469090 - L1MC/D LINE L1 -2197 5611 5399 1782 181 7 3 chr17 52969390 52969693 -32468787 - AluSx SINE Alu -8 304 1 691 243 68 54 chr17 52969693 52969764 -32468716 - L1MC/D LINE L1 -2409 5399 5317 2324 157 18 13 chr17 52969764 52970152 -32468328 - MLT1B LTR MaLR 0 390 1 2307 181 18 3 chr17 52970153 52970534 -32467946 - MLT1B-int LTR MaLR -1 1370 984 2390 270 122 2 chr17 52970634 52971634 -32466846 + L2 LINE L2 2179 3313 0 6238 51 0 9 chr17 52971965 52972704 -32465776 + L1PA7 LINE L1 5419 6150 -4 728 96 92 5 chr17 52972761 52972788 -32465692 - L1MB1 LINE L1 -312 5809 5786 424 92 77 0 chr17 52972788 52972853 -32465627 - L1PA13 LINE L1 -5 6158 6089 728 96 92 5 chr17 52972853 52973015 -32465465 - L1MB1 LINE L1 -335 5786 5644 882 212 5 22 chr17 52973018 52973202 -32465278 + AluJo SINE Alu 17 197 -115 1736 181 37 0 chr17 52973308 52973656 -32464824 - Charlie5 DNA MER1_type -15 2597 2237 479 217 96 0 chr17 52973657 52973772 -32464708 - Charlie5 DNA MER1_type -2486 126 1 568 273 91 6 chr17 52973880 52974056 -32464424 - MIR SINE MIR -22 240 50 182 323 141 0 chr17 52974211 52974310 -32464170 + MIR SINE MIR 2 114 -148 230 268 207 0 chr17 52974313 52974395 -32464085 + L2 LINE L2 3214 3312 -1 318 271 14 0 chr17 52974762 52974832 -32463648 - MLT1K LTR MaLR -1 587 517 726 191 15 8 chr17 52975432 52975563 -32462917 - FLAM_C SINE Alu -10 133 2 1892 82 16 4 chr17 52975606 52975851 -32462629 - AluSg SINE Alu -62 248 1 204 264 69 0 chr17 52977401 52977473 -32461007 - MIR SINE MIR -3 259 183 2116 112 17 3 chr17 52977586 52977873 -32460607 - AluSq SINE Alu -22 291 1 238 100 0 0 chr17 52978177 52978217 -32460263 + MER41A LTR ERV1 428 467 -87 237 310 98 55 chr17 52978713 52979236 -32459244 - L2 LINE L2 -1491 1823 1279 200 261 0 0 chr17 52979292 52979357 -32459123 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 319 343 190 19 chr17 52979371 52979782 -32458698 - L2 LINE L2 0 3313 2833 237 343 48 52 chr17 52979836 52980046 -32458434 - L2 LINE L2 -563 2751 2543 223 329 89 13 chr17 52981045 52981124 -32457356 + L2 LINE L2 3013 3097 -216 538 232 142 0 chr17 52981129 52981284 -32457196 + MER93b LTR ERV1 1 177 -196 822 182 0 21 chr17 52981284 52981427 -32457053 - FLAM_C SINE Alu -2 141 2 361 292 31 56 chr17 52981431 52981592 -32456888 + L2 LINE L2 3156 3312 -1 189 333 0 0 chr17 52981895 52981958 -32456522 + L2 LINE L2 1341 1403 -1911 952 249 22 63 chr17 52981969 52982475 -32456005 + HAL1 LINE L1 767 1251 -1256 1068 206 17 13 chr17 52982477 52982656 -32455824 - MSTD LTR MaLR 0 396 214 339 44 0 0 chr17 52982656 52982701 -32455779 + (TG)n Simple_repeat Simple_repeat 1 45 0 1068 206 17 13 chr17 52982701 52982754 -32455726 - MSTD LTR MaLR -182 214 163 24782 28 2 5 chr17 52982855 52985952 -32452528 + HERVK LTR ERVK 3612 6701 -542 318 279 150 46 chr17 52986244 52986524 -32451956 + L1ME LINE L1 524 832 -5238 1792 244 55 15 chr17 52986544 52986831 -32451649 + MLT1H LTR MaLR 52 367 -182 2038 146 0 7 chr17 52986831 52987139 -32451341 + AluSx SINE Alu 1 306 -6 1792 244 55 15 chr17 52987139 52987326 -32451154 + MLT1H LTR MaLR 367 545 -4 383 309 90 30 chr17 52987341 52987542 -32450938 + L1ME LINE L1 847 1059 -5011 416 251 48 98 chr17 52987554 52987712 -32450768 + L1ME LINE L1 1096 1260 -5001 2385 110 0 0 chr17 52987712 52988021 -32450459 + AluSq SINE Alu 1 309 -4 416 251 48 98 chr17 52988021 52988196 -32450284 + L1ME LINE L1 1260 1442 -4819 1657 112 12 8 chr17 52988196 52988454 -32450026 - L1PB1 LINE L1 0 6151 5893 416 251 48 98 chr17 52988454 52988526 -32449954 + L1ME LINE L1 1442 1516 -4745 1775 156 11 0 chr17 52988526 52988808 -32449672 + AluSx SINE Alu 4 288 -24 416 251 48 98 chr17 52988808 52988939 -32449541 + L1ME LINE L1 1516 1607 -4654 715 222 111 3 chr17 52988964 52989261 -32449219 + L1ME LINE L1 1730 2058 -4024 * 1805 246 43 37 chr17 52989234 52990100 -32448380 + L1ME LINE L1 2301 3171 -2909 2554 168 78 54 chr17 52990642 52991230 -32447250 + MER21A LTR ERV1 195 796 -135 21690 150 20 18 chr17 52991342 52994074 -32444406 + ERVL-B1 LTR ERVL 1944 4688 -1076 1701 216 17 3 chr17 52994074 52994430 -32444050 - MLT1A1 LTR MaLR 0 365 5 21690 150 20 18 chr17 52994430 52995503 -32442977 + ERVL-B1 LTR ERVL 4688 5757 -7 1327 125 14 5 chr17 52995504 52995712 -32442768 + MLT2B1 LTR ERVL 2 211 -309 703 192 23 0 chr17 52995712 52995842 -32442638 + FLAM_A SINE Alu 1 133 0 6336 71 12 2 chr17 52996221 52997105 -32441375 - HERVK LTR ERVK -6350 893 1 9178 13 1 0 chr17 52997105 52998073 -32440407 - LTR5 LTR ERVK 0 969 1 1784 80 0 0 chr17 52998073 52998312 -32440168 + HERVK11 LTR ERVK 4585 4823 -3130 227 159 23 0 chr17 52998416 52998460 -32440020 - MER94 DNA DNA -78 56 12 1122 263 66 25 chr17 53001644 53002051 -32436429 - LTR16A LTR ERVL 0 450 27 213 364 0 0 chr17 53002382 53002459 -32436021 - MER5A DNA MER1_type -53 136 60 344 250 133 83 chr17 53003008 53003248 -32435232 - L2 LINE L2 0 3313 3062 860 177 25 25 chr17 53003248 53003451 -32435029 + L1PA16 LINE L1 5961 6163 -3 802 228 46 55 chr17 53003634 53003853 -32434627 - MER20 DNA MER1_type -2 217 1 633 321 81 19 chr17 53004117 53004942 -32433538 - L1M4 LINE L1 -1480 4666 3791 735 254 40 29 chr17 53005046 53005393 -32433087 - MER69 DNA AcHobo -32 2494 2144 1488 300 37 9 chr17 53005496 53005644 -32432836 - MER69 DNA AcHobo -662 564 422 2323 147 86 0 chr17 53005644 53006038 -32432442 - MSTA LTR MaLR 0 428 1 1488 300 37 9 chr17 53006038 53006425 -32432055 - MER69 DNA AcHobo -804 422 14 22 0 0 0 chr17 53006990 53007012 -32431468 + AT_rich Low_complexity Low_complexity 1 22 0 2383 76 0 31 chr17 53007207 53007524 -32430956 - AluY SINE Alu -4 307 1 196 237 0 0 chr17 53008212 53008250 -32430230 - MER5A DNA MER1_type -23 166 129 1435 186 12 16 chr17 53008550 53008894 -32429586 + MER61C LTR ERV1 2 434 0 416 322 65 23 chr17 53008903 53009117 -32429363 + MIR SINE MIR 9 231 -31 398 296 62 73 chr17 53009596 53009870 -32428610 + MLT1K LTR MaLR 316 586 -2 322 359 84 28 chr17 53009872 53010159 -32428321 + L2 LINE L2 2939 3241 -31 298 257 10 20 chr17 53010998 53011099 -32427381 + (TA)n Simple_repeat Simple_repeat 1 100 0 330 26 0 0 chr17 53011099 53011138 -32427342 + (TG)n Simple_repeat Simple_repeat 2 40 0 268 279 59 44 chr17 53012473 53012609 -32425871 + MLT1H LTR MaLR 25 162 -387 561 310 90 20 chr17 53013065 53013365 -32425115 + LTR33 LTR ERVL 46 366 -155 21 36 0 0 chr17 53013670 53013698 -32424782 + AT_rich Low_complexity Low_complexity 1 28 0 2633 194 9 11 chr17 53013898 53014471 -32424009 - L1MB2 LINE L1 -7 6164 5593 807 205 51 20 chr17 53014477 53014770 -32423710 - L1MB2 LINE L1 -1556 4590 4289 4625 159 28 7 chr17 53014922 53016030 -32422450 + L1PB4 LINE L1 5027 6154 -2 471 180 0 11 chr17 53016443 53016532 -32421948 - FRAM SINE Alu -17 159 72 1563 162 23 3 chr17 53016597 53016900 -32421580 + L1PB4 LINE L1 5665 5973 -183 459 209 44 0 chr17 53016910 53017001 -32421479 - AluJ/FLAM SINE Alu -217 95 1 240 371 38 8 chr17 53017300 53017432 -32421048 + MLT1I LTR MaLR 70 205 -204 233 319 11 0 chr17 53017533 53017627 -32420853 + MLT1I LTR MaLR 315 409 0 183 288 233 0 chr17 53018190 53018263 -32420217 + L2 LINE L2 3168 3257 -15 200 340 50 30 chr17 53019221 53019321 -32419159 - L2 LINE L2 -22 3250 3149 192 77 0 0 chr17 53019484 53019510 -32418970 + (T)n Simple_repeat Simple_repeat 1 26 0 216 188 0 0 chr17 53019692 53019740 -32418740 + T-rich Low_complexity Low_complexity 1 48 0 7589 25 7 0 chr17 53019740 53021417 -32417063 - L1PA2 LINE L1 0 6155 4474 2912 20 0 0 chr17 53021417 53021767 -32416713 + L1PA2 LINE L1 4126 4475 -1671 243 293 41 81 chr17 53022063 53022186 -32416294 + MER5A DNA MER1_type 72 189 0 998 184 18 14 chr17 53022452 53022669 -32415811 + MLT2B3 LTR ERVL 3 220 -334 737 142 38 14 chr17 53022681 53022893 -32415587 + CT-rich Low_complexity Low_complexity 1 217 0 887 196 95 4 chr17 53022893 53023128 -32415352 + MLT2B3 LTR ERVL 222 515 -39 231 150 0 0 chr17 53023182 53023222 -32415258 + MLT2B3 LTR ERVL 466 505 -15 447 303 49 11 chr17 53024283 53024468 -32414012 + MIR SINE MIR 19 210 -52 241 329 106 24 chr17 53024737 53024907 -32413573 - MIR SINE MIR -13 249 66 261 79 0 0 chr17 53025272 53025310 -32413170 - MLT1H1 LTR MaLR -6 549 512 442 295 8 0 chr17 53025542 53025664 -32412816 - MLT1H1 LTR MaLR -432 123 1 183 129 0 0 chr17 53026068 53026099 -32412381 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 248 237 26 53 chr17 53026607 53026683 -32411797 - MER5A DNA MER1_type -81 108 35 * 291 271 0 14 chr17 53026629 53026699 -32411781 + MER5A DNA MER1_type 114 182 -7 340 80 147 80 chr17 53026735 53026810 -32411670 + MADE1 DNA Mariner 1 80 0 231 78 216 0 chr17 53027143 53027194 -32411286 - L1MA3 LINE L1 -1 6304 6243 8899 144 37 14 chr17 53027227 53029173 -32409307 - L1MA1 LINE L1 0 7721 5689 3048 33 11 0 chr17 53029173 53029535 -32408945 - L1PA3 LINE L1 -3 6152 5787 8899 144 37 14 chr17 53029535 53030375 -32408105 - L1MA1 LINE L1 -2032 5689 4870 6768 55 25 0 chr17 53030418 53031128 -32407352 - L1PA7 LINE L1 0 6154 5475 2288 94 0 31 chr17 53031128 53031448 -32407032 - AluY SINE Alu -1 310 1 6768 55 25 0 chr17 53031448 53031777 -32406703 - L1PA7 LINE L1 -679 5475 5156 3569 194 17 11 chr17 53031770 53032955 -32405525 - L1MA1 LINE L1 -3148 4417 3223 3234 120 12 10 chr17 53033056 53033632 -32404848 - L1MA1 LINE L1 -4805 2760 2184 1829 205 29 45 chr17 53033654 53034142 -32404338 - L1MA1 LINE L1 -7065 500 21 288 296 0 0 chr17 53034768 53034856 -32403624 - L1MC4 LINE L1 -30 8012 7925 657 138 0 0 chr17 53034979 53035095 -32403385 - L1MA7 LINE L1 -3 6288 6173 691 248 54 33 chr17 53035100 53035189 -32403291 - L1M2 LINE L1 -774 5517 5431 2316 116 37 6 chr17 53035189 53035542 -32402938 - THE1B LTR MaLR 0 364 1 691 248 54 33 chr17 53035542 53035694 -32402786 - L1M2 LINE L1 -860 5431 5271 1075 76 0 0 chr17 53035839 53035971 -32402509 + AluSp/q SINE Alu 167 298 -15 2642 108 32 25 chr17 53035976 53036419 -32402061 - Tigger2 DNA MER2_type 0 2718 2273 289 143 36 18 chr17 53036406 53036462 -32402018 - Tigger2 DNA MER2_type -2646 72 16 * 1024 94 0 0 chr17 53036462 53036600 -32401880 - MER85 DNA T2_type -1 138 1 206 288 50 0 chr17 53038445 53038525 -32399955 - MIR SINE MIR -6 256 173 540 296 17 22 chr17 53038580 53038759 -32399721 - MIR SINE MIR -76 186 9 841 133 21 0 chr17 53039126 53039269 -32399211 + MER50 LTR ERV1 1 146 -588 2009 170 0 0 chr17 53039269 53039575 -32398905 + AluSx SINE Alu 5 310 -2 707 141 8 8 chr17 53039576 53039704 -32398776 + MER50 LTR ERV1 323 450 -284 783 169 26 0 chr17 53039705 53039859 -32398621 + MER50-int LTR ERV1 1 158 -7047 * 4298 131 1 29 chr17 53039856 53040557 -32397923 + MER50-int LTR ERV1 267 948 -6257 198 0 0 0 chr17 53041623 53041645 -32396835 + (CA)n Simple_repeat Simple_repeat 2 23 0 480 299 106 0 chr17 53042050 53042235 -32396245 + MIR SINE MIR 35 242 -20 345 172 0 0 chr17 53043086 53043150 -32395330 + MLT1K LTR MaLR 515 578 -10 180 358 59 43 chr17 53043798 53043985 -32394495 + L2 LINE L2 2937 3126 -146 1447 212 5 72 chr17 53043996 53044387 -32394093 - MLT1A1 LTR MaLR 0 365 1 7529 25 7 3 chr17 53044815 53045817 -32392663 + L1PA3 LINE L1 5151 6155 0 1579 165 122 9 chr17 53045978 53046306 -32392174 + MLT1A1 LTR MaLR 1 365 0 318 264 56 0 chr17 53046321 53046393 -32392087 + L2 LINE L2 3197 3272 0 465 262 128 12 chr17 53046523 53046687 -32391793 + MIR SINE MIR 12 194 -68 297 264 25 16 chr17 53047677 53047798 -32390682 + MER103 DNA DNA 8 129 -37 5378 27 0 2 chr17 53048284 53048908 -32389572 + L1PA3 LINE L1 5533 6155 0 355 314 157 0 chr17 53048970 53049091 -32389389 - MER91C DNA MER1_type 0 140 1 183 158 0 53 chr17 53049940 53049978 -32388502 + L2 LINE L2 3267 3302 -11 1393 159 141 18 chr17 53050763 53051097 -32387383 + THE1C LTR MaLR 1 375 0 186 308 0 0 chr17 53051110 53051162 -32387318 + MIR SINE MIR 101 152 -110 632 350 48 37 chr17 53051608 53052088 -32386392 - L2 LINE L2 -277 2995 2514 436 365 25 21 chr17 53052162 53052403 -32386077 + MLT1I LTR MaLR 63 304 -105 1415 254 65 39 chr17 53052423 53052800 -32385680 + L1ME LINE L1 2683 3049 -3097 5621 45 1 0 chr17 53052800 53053481 -32384999 + L1PA5 LINE L1 5465 6146 -8 1415 254 65 39 chr17 53053481 53053917 -32384563 + L1ME LINE L1 3049 3517 -2629 9816 103 8 16 chr17 53053923 53055511 -32382969 - L1PA7 LINE L1 -1436 4710 3136 6590 69 9 9 chr17 53055512 53056947 -32381533 + L1PA7 LINE L1 4718 6153 -1 982 258 156 39 chr17 53057046 53057987 -32380493 + L1ME LINE L1 4718 5762 -402 369 300 20 10 chr17 53058029 53058129 -32380351 - MER5A DNA MER1_type -88 101 1 223 291 93 0 chr17 53058132 53058218 -32380262 + L2 LINE L2 3192 3285 -28 2260 179 7 129 chr17 53058459 53058742 -32379738 + L1MA4A LINE L1 5411 5727 -576 2274 101 7 0 chr17 53058742 53059040 -32379440 + AluSx SINE Alu 1 300 -12 342 0 0 0 chr17 53059040 53059078 -32379402 + (CA)n Simple_repeat Simple_repeat 2 39 0 2260 179 7 129 chr17 53059078 53059513 -32378967 + L1MA4A LINE L1 5725 6042 -261 * 2512 133 8 70 chr17 53059114 53059627 -32378853 + L1PB4 LINE L1 5676 6156 0 1555 188 40 17 chr17 53059694 53059819 -32378661 + AluJb SINE Alu 1 122 -190 312 27 0 0 chr17 53059819 53059856 -32378624 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1555 188 40 17 chr17 53059856 53060028 -32378452 + AluJb SINE Alu 122 305 -7 852 246 6 11 chr17 53060440 53060615 -32377865 - MER5A DNA MER1_type -2 187 14 253 264 74 66 chr17 53060594 53060715 -32377765 + L2 LINE L2 3150 3271 -1 * 207 171 0 0 chr17 53060719 53060754 -32377726 + (TG)n Simple_repeat Simple_repeat 2 36 0 282 330 167 50 chr17 53061642 53061960 -32376520 - L2 LINE L2 -4 3268 2914 577 370 64 39 chr17 53062082 53062517 -32375963 + L2 LINE L2 2810 3255 -17 240 327 48 10 chr17 53062590 53062694 -32375786 - MIR SINE MIR -71 191 84 463 274 0 51 chr17 53063185 53063302 -32375178 - L2 LINE L2 -18 3295 3185 192 319 92 67 chr17 53063665 53064176 -32374304 - L2 LINE L2 -1549 1765 1242 1597 232 20 0 chr17 53065055 53065408 -32373072 + MLT1A1 LTR MaLR 6 365 0 558 216 75 0 chr17 53065408 53065565 -32372915 - MLT1B LTR MaLR -16 378 194 492 268 56 24 chr17 53065594 53065781 -32372699 - MLT1B LTR MaLR -187 187 1 310 333 0 42 chr17 53066262 53066358 -32372122 - MIR3 SINE MIR -111 97 6 503 304 120 14 chr17 53066480 53066697 -32371783 - MIR SINE MIR -18 244 5 274 342 48 93 chr17 53068100 53068590 -32369890 + L2 LINE L2 2769 3235 -37 274 232 79 31 chr17 53068771 53068909 -32369571 - MLT1H LTR MaLR -16 526 382 1887 279 114 9 chr17 53068920 53069597 -32368883 + L2 LINE L2 1414 2161 -1153 5220 143 12 9 chr17 53069599 53070912 -32367568 - L1PA15 LINE L1 -5 6160 4827 291 183 14 0 chr17 53070912 53070983 -32367497 + L1 LINE L1 3432 3503 -2643 5924 189 20 8 chr17 53071032 53072317 -32366163 + L1P LINE L1 3487 4787 -1359 427 283 0 0 chr17 53072559 53072672 -32365808 - MER117 DNA MER1_type -84 113 1 298 383 23 0 chr17 53073201 53073329 -32365151 + MIR3 SINE MIR 54 184 -24 183 403 47 0 chr17 53073365 53073494 -32364986 - MIR SINE MIR -98 164 30 377 270 163 10 chr17 53073684 53073973 -32364507 - L1ME3A LINE L1 -200 5970 5638 244 236 0 0 chr17 53074049 53074104 -32364376 - L1ME3A LINE L1 -636 5526 5472 801 258 143 31 chr17 53074232 53074380 -32364100 - L1ME3A LINE L1 -1181 4965 4835 2179 146 8 27 chr17 53074380 53074750 -32363730 + THE1B LTR MaLR 1 363 -1 801 258 143 31 chr17 53074750 53075303 -32363177 - L1ME3A LINE L1 -1311 4835 4186 389 242 145 30 chr17 53075315 53075646 -32362834 - L1ME3A LINE L1 -2025 4121 3753 200 125 21 62 chr17 53075646 53075694 -32362786 + CT-rich Low_complexity Low_complexity 5 50 0 1257 230 53 43 chr17 53075995 53076413 -32362067 + LTR9 LTR ERV1 191 612 0 1510 109 78 8 chr17 53076413 53076669 -32361811 + MSTA LTR MaLR 151 424 -4 292 322 55 33 chr17 53077295 53077478 -32361002 - ERVL LTR ERVL -1867 3618 3432 535 357 41 21 chr17 53077519 53077723 -32360757 - ERVL LTR ERVL -2278 3376 3159 1006 195 14 41 chr17 53077723 53077944 -32360536 + MER20 DNA MER1_type 1 215 -4 535 357 41 21 chr17 53077944 53078126 -32360354 - ERVL LTR ERVL -2495 3159 2982 764 301 75 55 chr17 53078374 53078946 -32359534 - ERVL LTR ERVL -3028 2626 2040 806 276 0 0 chr17 53078946 53079120 -32359360 - MER96 DNA MER1_type 0 175 2 764 301 75 55 chr17 53079120 53079151 -32359329 - ERVL LTR ERVL -3614 2040 2011 195 100 0 0 chr17 53079391 53079421 -32359059 + (TCTCCC)n Simple_repeat Simple_repeat 6 35 0 554 261 116 6 chr17 53079833 53080144 -32358336 + Charlie2a DNA MER1_type 1509 1853 -1009 526 239 17 0 chr17 53080210 53080327 -32358153 - MER96 DNA MER1_type? -6 169 51 796 258 54 76 chr17 53080357 53080540 -32357940 + Charlie2a DNA MER1_type 1948 2133 -729 369 0 0 0 chr17 53080540 53080581 -32357899 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 258 54 76 chr17 53080581 53080727 -32357753 + Charlie2a DNA MER1_type 2133 2281 -581 2382 198 43 4 chr17 53080727 53081213 -32357267 - MLT1D LTR MaLR 0 505 1 796 258 54 76 chr17 53081213 53081801 -32356679 + Charlie2a DNA MER1_type 2281 2846 -16 235 185 86 62 chr17 53081937 53082018 -32356462 + MIR SINE MIR 110 192 -70 23 0 0 0 chr17 53083325 53083348 -32355132 + AT_rich Low_complexity Low_complexity 1 23 0 1437 195 24 27 chr17 53086124 53086452 -32352028 + L1 LINE L1 4717 5043 -1103 7899 162 11 10 chr17 53086463 53088728 -32349752 + L1PA12 LINE L1 3849 6107 -61 842 110 0 22 chr17 53088728 53088864 -32349616 + L1PA13 LINE L1 6031 6163 0 14806 51 16 1 chr17 53088872 53091519 -32346961 + L1PA6 LINE L1 3492 6154 0 604 253 32 46 chr17 53092352 53092637 -32345843 - L1ME4a LINE L1 -238 5883 5603 275 248 51 29 chr17 53093081 53093218 -32345262 - L1ME4a LINE L1 -49 6072 5933 920 50 121 0 chr17 53093621 53093762 -32344718 + L1P LINE L1 5246 5403 -743 2204 111 16 50 chr17 53093974 53094351 -32344129 - THE1B LTR MaLR 0 364 1 568 289 94 42 chr17 53094659 53095051 -32343429 - L1ME4a LINE L1 -431 5739 5328 222 380 79 13 chr17 53095086 53095315 -32343165 + L2 LINE L2 2647 2890 -424 2746 73 3 6 chr17 53095323 53095679 -32342801 + THE1A LTR MaLR 1 355 0 11125 105 7 7 chr17 53095679 53097259 -32341221 + THE1A-int LTR MaLR 1 1580 0 2604 80 3 6 chr17 53097261 53097612 -32340868 + THE1A LTR MaLR 3 352 -3 185 237 0 51 chr17 53097869 53097928 -32340552 + L2 LINE L2 3216 3271 -1 524 47 0 0 chr17 53099151 53099215 -32339265 - L1PA4 LINE L1 -67 6088 6025 543 66 0 0 chr17 53099215 53099290 -32339190 + L1PA4 LINE L1 6080 6155 0 1329 258 106 13 chr17 53100188 53100743 -32337737 - MLT2E LTR ERVL 0 628 1 2131 290 92 45 chr17 53100760 53101904 -32336576 - ERVL-E LTR ERVL -11 5753 4557 2994 288 80 20 chr17 53101945 53103085 -32335395 - ERVL-E LTR ERVL -2986 2778 1571 390 316 46 11 chr17 53103088 53103262 -32335218 + MLT2F LTR ERVL 37 216 -447 425 365 20 0 chr17 53103370 53103573 -32334907 + MLT2F LTR ERVL 457 663 0 1105 343 28 43 chr17 53103595 53104775 -32333705 - ERVL-E LTR ERVL -4224 1540 310 2283 116 9 0 chr17 53105000 53105317 -32333163 - L1PA13 LINE L1 -192 5971 5649 546 84 0 42 chr17 53105317 53105412 -32333068 - L1PA6 LINE L1 0 6154 6064 2283 116 9 0 chr17 53105412 53105440 -32333040 - L1PA13 LINE L1 -514 5649 5623 1149 71 0 30 chr17 53105440 53105607 -32332873 + L1PA13 LINE L1 5995 6158 -5 560 314 19 6 chr17 53105661 53105940 -32332540 - MLT2E LTR ERVL 0 628 265 878 268 29 4 chr17 53105941 53106187 -32332293 - MLT1E1 LTR MaLR 0 654 403 474 245 9 11 chr17 53106221 53106444 -32332036 - MLT1E1 LTR MaLR -383 271 2 769 232 26 103 chr17 53106453 53106725 -32331755 - MLT2E LTR ERVL -368 260 10 21 36 0 0 chr17 53106804 53106832 -32331648 + AT_rich Low_complexity Low_complexity 1 28 0 305 343 17 19 chr17 53107328 53107476 -32331004 + MIR SINE MIR 22 167 -70 5134 143 38 31 chr17 53108036 53108269 -32330211 + MER49 LTR ERV1 1 231 -692 2270 98 0 0 chr17 53108269 53108565 -32329915 + AluSx SINE Alu 1 296 -16 5134 143 38 31 chr17 53108565 53108823 -32329657 + MER49 LTR ERV1 231 486 -437 2176 116 3 19 chr17 53108823 53109133 -32329347 + AluSp SINE Alu 1 305 -8 5134 143 38 31 chr17 53109133 53109538 -32328942 + MER49 LTR ERV1 486 904 -19 210 338 166 29 chr17 53109618 53109926 -32328554 + L2 LINE L2 2133 2482 -832 637 315 67 4 chr17 53110547 53110814 -32327666 - L2 LINE L2 -177 3136 2853 793 233 0 0 chr17 53110918 53111068 -32327412 + AluJb SINE Alu 134 283 -29 370 330 89 22 chr17 53111162 53111341 -32327139 - L1MEc LINE L1 -2596 3533 3343 1136 267 93 26 chr17 53111345 53112064 -32326416 - L1MEc LINE L1 -2820 3309 2543 848 261 188 26 chr17 53112081 53112464 -32326016 - LTR16A1 LTR ERVL 0 457 13 591 284 73 9 chr17 53112494 53112836 -32325644 - L1MEc LINE L1 -3616 2513 2150 3052 200 35 31 chr17 53112857 53113566 -32324914 - L1MB5 LINE L1 -8 6166 5455 550 296 27 34 chr17 53114027 53114478 -32324002 - L1MEc LINE L1 -4556 1653 1218 273 285 31 47 chr17 53114580 53114773 -32323707 - L1MEc LINE L1 -5040 1079 890 324 369 0 25 chr17 53115612 53115769 -32322711 - L2 LINE L2 -771 2543 2391 368 290 102 17 chr17 53115937 53116113 -32322367 + MIR SINE MIR 59 249 -13 1737 114 12 8 chr17 53116365 53116663 -32321817 - AluSc SINE Alu 0 344 46 336 103 0 0 chr17 53117014 53117072 -32321408 + (TG)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr17 53117148 53117170 -32321310 + AT_rich Low_complexity Low_complexity 1 22 0 241 192 51 0 chr17 53117311 53117389 -32321091 + (TA)n Simple_repeat Simple_repeat 2 83 0 189 0 0 0 chr17 53117389 53117410 -32321070 + (CA)n Simple_repeat Simple_repeat 2 22 0 24 53 0 0 chr17 53117921 53117959 -32320521 + AT_rich Low_complexity Low_complexity 1 38 0 183 309 162 0 chr17 53118251 53118319 -32320161 - L2 LINE L2 0 3272 3194 319 337 87 36 chr17 53118491 53118875 -32319605 - L2 LINE L2 -273 2999 2601 197 350 62 0 chr17 53118967 53119064 -32319416 - MIR SINE MIR -99 163 61 212 57 0 29 chr17 53119181 53119216 -32319264 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 2357 30 0 0 chr17 53119216 53119487 -32318993 - L1PA3 LINE L1 -24 6131 5861 274 283 150 0 chr17 53119540 53119653 -32318827 - L2 LINE L2 -1 3312 3183 2696 184 37 12 chr17 53119653 53120138 -32318342 + MER54B LTR ERVL 1 497 -296 228 122 0 0 chr17 53120143 53120184 -32318296 + (GA)n Simple_repeat Simple_repeat 2 42 0 777 171 4 151 chr17 53120187 53120439 -32318041 + MER54B LTR ERVL 468 682 -111 330 296 87 104 chr17 53120473 53120828 -32317652 - L2 LINE L2 -106 3207 2859 * 1818 296 80 25 chr17 53120813 53121664 -32316816 - L2 LINE L2 -806 2508 1611 497 304 93 42 chr17 53121773 53122010 -32316470 - MIR SINE MIR -8 254 6 195 344 62 0 chr17 53122320 53122384 -32316096 - L2 LINE L2 -38 3275 3208 208 191 0 0 chr17 53124683 53124730 -32313750 - L2 LINE L2 -658 2656 2610 383 204 9 0 chr17 53124807 53124892 -32313588 - MER5A DNA MER1_type -100 89 4 493 299 5 82 chr17 53124962 53125015 -32313465 - MER5B DNA MER1_type -1 177 122 2326 109 0 0 chr17 53125015 53125326 -32313154 + AluY SINE Alu 1 311 0 493 299 5 82 chr17 53125326 53125456 -32313024 - MER5B DNA MER1_type -56 122 8 194 319 186 9 chr17 53125721 53125834 -32312646 + L2 LINE L2 3139 3271 -1 348 176 0 0 chr17 53126108 53126176 -32312304 + (TA)n Simple_repeat Simple_repeat 1 68 0 557 278 67 26 chr17 53126180 53126374 -32312106 - MIR SINE MIR -58 204 3 1601 211 109 142 chr17 53126437 53127403 -32311077 - LTR1B LTR ERV1 0 1020 1 317 355 55 73 chr17 53127623 53128130 -32310350 + L2 LINE L2 1697 2194 -1120 2455 173 14 7 chr17 53128132 53128555 -32309925 - MSTB LTR MaLR 0 426 1 31 58 0 0 chr17 53128882 53128934 -32309546 + AT_rich Low_complexity Low_complexity 1 52 0 311 364 43 76 chr17 53129121 53129566 -32308914 + L2 LINE L2 2828 3257 -15 1196 34 0 7 chr17 53130113 53130260 -32308220 - L1PA10 LINE L1 -3 6165 6020 357 234 18 81 chr17 53130534 53130645 -32307835 - MIR3 SINE MIR -11 197 94 438 271 150 39 chr17 53132778 53132985 -32305495 - MIR SINE MIR -25 237 8 1135 227 74 67 chr17 53133527 53133613 -32304867 + MLT1C LTR MaLR 1 85 -382 1835 138 31 57 chr17 53133613 53133998 -32304482 + THE1C LTR MaLR 1 375 0 1135 227 74 67 chr17 53133998 53134375 -32304105 + MLT1C LTR MaLR 85 467 0 398 299 42 61 chr17 53135327 53135541 -32302939 - MIR SINE MIR -6 256 47 2112 278 191 35 chr17 53136598 53137726 -32300754 + L2 LINE L2 1481 2785 -529 2076 178 50 24 chr17 53138023 53138445 -32300035 - Tigger2a DNA MER2_type 0 434 2 2174 116 3 0 chr17 53138834 53139127 -32299353 - AluSx SINE Alu -16 296 3 335 264 8 0 chr17 53139648 53139769 -32298711 + (TTTA)n Simple_repeat Simple_repeat 4 125 0 24 0 0 0 chr17 53140013 53140037 -32298443 + AT_rich Low_complexity Low_complexity 1 24 0 284 279 109 7 chr17 53141591 53141738 -32296742 - MIR SINE MIR -5 257 96 215 306 0 0 chr17 53141791 53141840 -32296640 + (CA)n Simple_repeat Simple_repeat 2 50 0 247 205 0 39 chr17 53141857 53141935 -32296545 + L1MC5 LINE L1 7454 7528 -433 394 271 89 86 chr17 53142091 53142416 -32296064 - HAL1b LINE L1 -731 617 292 28 48 0 0 chr17 53142454 53142496 -32295984 + AT_rich Low_complexity Low_complexity 1 42 0 1681 278 78 25 chr17 53142689 53143204 -32295276 - MLT1F LTR MaLR 0 542 1 3213 158 86 2 chr17 53144695 53145182 -32293298 - L1P LINE L1 -1950 4196 3651 279 0 0 0 chr17 53145182 53145213 -32293267 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3213 158 86 2 chr17 53145213 53145308 -32293172 - L1P LINE L1 -2495 3651 3565 2038 125 0 6 chr17 53145319 53145646 -32292834 + L1P LINE L1 5024 5348 -798 25 0 0 0 chr17 53146143 53146168 -32292312 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr17 53146232 53146253 -32292227 + AT_rich Low_complexity Low_complexity 1 21 0 899 245 61 23 chr17 53146774 53147035 -32291445 + MLT1C LTR MaLR 4 274 -193 376 336 57 52 chr17 53147734 53147962 -32290518 + MLT1J1 LTR MaLR 40 272 -174 2426 222 52 8 chr17 53147962 53148560 -32289920 + MLT1E3 LTR MaLR 1 624 0 376 336 57 52 chr17 53148560 53148736 -32289744 + MLT1J1 LTR MaLR 272 446 0 773 179 0 8 chr17 53149400 53149534 -32288946 + FRAM SINE Alu 1 130 -46 422 118 0 29 chr17 53149578 53149646 -32288834 - LTR66 LTR ERVL 0 610 545 1875 99 63 56 chr17 53149806 53150108 -32288372 - AluSg SINE Alu -6 304 1 1364 172 53 63 chr17 53150164 53150478 -32288002 + AluJb SINE Alu 1 311 0 2856 175 9 14 chr17 53150976 53151529 -32286951 - L1PA16 LINE L1 -8 6158 5609 380 265 20 31 chr17 53151779 53151877 -32286603 - MER5A DNA MER1_type -84 105 9 845 234 81 54 chr17 53151936 53152198 -32286282 - MLT1A2 LTR MaLR -15 452 163 1770 151 0 14 chr17 53152198 53152489 -32285991 - AluJb SINE Alu -25 287 1 845 234 81 54 chr17 53152489 53152656 -32285824 - MLT1A2 LTR MaLR -304 163 2 832 209 0 0 chr17 53152888 53153060 -32285420 - L1 LINE L1 -1058 5088 4917 2433 106 198 96 chr17 53153067 53153642 -32284838 + L1PB3 LINE L1 5520 6153 -1 23 0 0 0 chr17 53153642 53153665 -32284815 + AT_rich Low_complexity Low_complexity 1 23 0 1677 147 0 63 chr17 53153669 53153998 -32284482 + AluSx SINE Alu 3 312 0 34 24 0 0 chr17 53153998 53154039 -32284441 + AT_rich Low_complexity Low_complexity 1 41 0 186 231 215 46 chr17 53154833 53154963 -32283517 - MIR SINE MIR -12 250 99 660 214 0 8 chr17 53155008 53155134 -32283346 + MER58B DNA MER1_type 217 341 0 542 361 14 18 chr17 53155211 53155430 -32283050 + MIR SINE MIR 26 243 -19 2151 117 3 0 chr17 53156741 53157050 -32281430 - AluSg SINE Alu 0 310 1 2484 95 27 5 chr17 53157210 53157577 -32280903 + THE1C LTR MaLR 1 375 0 2756 250 67 53 chr17 53157635 53158846 -32279634 - L1MEc LINE L1 -2462 3753 2518 2072 136 3 0 chr17 53158846 53159154 -32279326 - AluSx SINE Alu -2 310 2 2756 250 67 53 chr17 53159154 53159339 -32279141 - L1MEc LINE L1 -3697 2518 2337 25 65 0 0 chr17 53159377 53159423 -32279057 + AT_rich Low_complexity Low_complexity 1 46 0 485 267 89 27 chr17 53159443 53159799 -32278681 - L1MEc LINE L1 -4068 2328 1920 30 27 0 0 chr17 53159806 53159843 -32278637 + AT_rich Low_complexity Low_complexity 1 37 0 2045 148 0 0 chr17 53160168 53160473 -32278007 - AluSx SINE Alu -7 305 1 1147 49 0 0 chr17 53161542 53161685 -32276795 + L1PA4 LINE L1 6010 6152 -3 1328 232 106 59 chr17 53163072 53163604 -32274876 + MLT1F1 LTR MaLR 11 567 0 239 316 165 0 chr17 53164214 53164347 -32274133 + MIR SINE MIR 76 230 -32 21 0 0 0 chr17 53164408 53164429 -32274051 + AT_rich Low_complexity Low_complexity 1 21 0 486 0 0 0 chr17 53164782 53164836 -32273644 + (TA)n Simple_repeat Simple_repeat 1 54 0 260 274 89 32 chr17 53165950 53166074 -32272406 - MIR SINE MIR -50 212 82 408 248 86 89 chr17 53166249 53166581 -32271899 + MLT1I LTR MaLR 66 424 -22 1244 319 98 18 chr17 53166832 53167514 -32270966 + MER45C DNA AcHobo 1 779 -174 1350 205 39 7 chr17 53167623 53167930 -32270550 + MER45B DNA AcHobo 716 1032 -8 240 59 0 0 chr17 53167956 53167990 -32270490 + (A)n Simple_repeat Simple_repeat 1 34 0 716 302 36 3 chr17 53169371 53169679 -32268801 + MER45B DNA AcHobo 716 1033 -7 288 0 0 0 chr17 53169704 53169736 -32268744 + (A)n Simple_repeat Simple_repeat 1 32 0 227 331 83 18 chr17 53170730 53170899 -32267581 + MLT1I LTR MaLR 139 318 -91 26 0 0 0 chr17 53171044 53171070 -32267410 + AT_rich Low_complexity Low_complexity 1 26 0 285 327 33 57 chr17 53172458 53172669 -32265811 + MLT1I LTR MaLR 196 401 -8 36 0 0 0 chr17 53172829 53172865 -32265615 + AT_rich Low_complexity Low_complexity 1 36 0 307 309 71 8 chr17 53172886 53173012 -32265468 + MIR SINE MIR 74 207 -55 487 305 143 0 chr17 53173508 53173711 -32264769 + MIR SINE MIR 31 262 0 2336 189 14 5 chr17 53173959 53174393 -32264087 - Tigger2 DNA MER2_type -1 2717 2280 391 143 14 14 chr17 53174390 53174460 -32264020 + MER8 DNA MER2_type 170 239 0 * 238 254 15 30 chr17 53174675 53174742 -32263738 - L2 LINE L2 -47 3225 3160 24 0 0 0 chr17 53175109 53175133 -32263347 + AT_rich Low_complexity Low_complexity 1 24 0 201 398 0 0 chr17 53175633 53175716 -32262764 + MIR SINE MIR 43 125 -83 508 318 101 28 chr17 53175879 53176336 -32262144 + L1ME4a LINE L1 5512 6011 -110 1937 150 53 29 chr17 53176336 53176715 -32261765 + MLT1B LTR MaLR 1 388 -2 508 318 101 28 chr17 53176715 53176761 -32261719 + L1ME4a LINE L1 6011 6052 -69 881 221 0 53 chr17 53178439 53178647 -32259833 - MER3 DNA MER1_type -7 202 6 306 138 0 0 chr17 53179200 53179258 -32259222 + (GA)n Simple_repeat Simple_repeat 2 59 0 299 273 0 23 chr17 53179308 53179396 -32259084 + LTR33 LTR ERVL 14 99 -422 416 286 27 7 chr17 53179575 53179722 -32258758 + LTR33 LTR ERVL 366 515 -6 770 219 21 16 chr17 53180053 53180240 -32258240 + MER5A DNA MER1_type 2 189 0 313 309 49 64 chr17 53180478 53180866 -32257614 - L1M4 LINE L1 -825 5321 4940 7474 35 1 1 chr17 53181500 53182930 -32255550 - L1PA5 LINE L1 0 6154 4723 1965 127 52 25 chr17 53182996 53183359 -32255121 + THE1C LTR MaLR 1 373 -2 237 315 111 33 chr17 53184314 53184495 -32253985 - MIR SINE MIR -56 206 12 244 298 95 0 chr17 53184617 53184701 -32253779 - MER5A DNA MER1_type -86 103 12 474 333 169 22 chr17 53184938 53185382 -32253098 + L2 LINE L2 385 893 -2421 300 289 30 15 chr17 53186888 53187085 -32251395 - MER113 DNA MER1_type? -321 200 1 277 224 53 13 chr17 53187370 53187446 -32251034 + MLT1E LTR MaLR 51 129 -464 616 284 64 39 chr17 53187511 53187715 -32250765 + MLT1E LTR MaLR 201 409 -184 2297 132 24 16 chr17 53187717 53188089 -32250391 + THE1C LTR MaLR 1 375 0 9617 113 8 61 chr17 53188089 53189756 -32248724 + THE1C-int LTR MaLR 1 1580 0 2244 110 73 17 chr17 53189756 53190111 -32248369 + THE1C LTR MaLR 1 375 0 568 260 37 0 chr17 53190116 53190287 -32248193 + MLT1E1 LTR MaLR 412 652 -2 210 321 45 22 chr17 53190473 53190607 -32247873 - MIR SINE MIR -4 258 122 321 290 6 83 chr17 53190872 53191041 -32247439 + MLT1K LTR MaLR 374 529 -59 265 341 12 12 chr17 53191259 53191344 -32247136 - MIR SINE MIR -108 100 16 369 0 0 0 chr17 53192338 53192379 -32246101 + (TG)n Simple_repeat Simple_repeat 2 42 0 293 270 70 0 chr17 53192967 53193067 -32245413 + LTR16A1 LTR ERVL 168 274 -183 975 163 0 0 chr17 53193079 53193257 -32245223 - MER3 DNA MER1_type -30 179 2 337 271 100 36 chr17 53193960 53194100 -32244380 - MIR SINE MIR 0 262 114 515 184 178 53 chr17 53195638 53195790 -32242690 - MIR SINE MIR -89 173 3 476 354 62 17 chr17 53196165 53196597 -32241883 + L2 LINE L2 2538 3053 -260 1162 182 5 20 chr17 53196752 53196955 -32241525 + AluJb SINE Alu 87 286 -26 234 105 0 0 chr17 53196955 53196993 -32241487 + (CA)n Simple_repeat Simple_repeat 2 39 0 254 239 54 76 chr17 53196995 53197087 -32241393 + L2 LINE L2 3182 3271 -1 450 271 14 21 chr17 53197147 53197291 -32241189 - MIR SINE MIR -10 252 110 378 0 0 0 chr17 53197368 53197410 -32241070 + (CA)n Simple_repeat Simple_repeat 2 43 0 21 36 0 0 chr17 53197916 53197944 -32240536 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 53198254 53198277 -32240203 + AT_rich Low_complexity Low_complexity 1 23 0 185 265 0 20 chr17 53198725 53198774 -32239706 + MER5B DNA MER1_type 111 158 -20 324 278 56 8 chr17 53200967 53201093 -32237387 - MER94 DNA DNA -1 133 2 267 270 66 13 chr17 53201427 53201579 -32236901 - MER112 DNA MER1_type -13 247 88 2278 104 0 0 chr17 53202073 53202372 -32236108 + AluSg SINE Alu 1 299 -11 326 80 20 0 chr17 53202690 53202740 -32235740 + (GA)n Simple_repeat Simple_repeat 1 51 0 367 289 119 6 chr17 53203133 53203292 -32235188 - MER5B DNA MER1_type -1 177 1 203 171 0 0 chr17 53203828 53203863 -32234617 + L2 LINE L2 3271 3305 -8 2046 145 3 3 chr17 53203917 53204220 -32234260 + AluSx SINE Alu 1 303 -9 354 312 0 21 chr17 53204702 53204843 -32233637 + CT-rich Low_complexity Low_complexity 2 139 0 311 293 93 20 chr17 53205157 53205307 -32233173 - MIR SINE MIR -24 238 78 28 0 0 0 chr17 53205325 53205353 -32233127 + AT_rich Low_complexity Low_complexity 1 28 0 292 275 106 14 chr17 53205424 53205566 -32232914 - MIR SINE MIR -5 257 103 218 308 70 42 chr17 53205788 53205931 -32232549 + MIR SINE MIR 8 154 -108 434 130 0 0 chr17 53206119 53206188 -32232292 - LTR12 LTR ERV1 0 714 646 36548 111 23 15 chr17 53206236 53211984 -32226496 + HERV9 LTR ERV1 58 5851 -2548 8042 118 6 12 chr17 53211978 53213261 -32225219 + HERV9 LTR ERV1 7125 8399 0 * 923 182 132 27 chr17 53213261 53213519 -32224961 + LTR12 LTR ERV1 1 285 -429 321 183 0 0 chr17 53213520 53213591 -32224889 + LTR30 LTR ERV1 553 623 -99 690 168 25 0 chr17 53213592 53213711 -32224769 + LTR12 LTR ERV1 359 480 -234 431 165 0 22 chr17 53215263 53215354 -32223126 + (CATA)n Simple_repeat Simple_repeat 2 90 0 404 164 0 0 chr17 53217083 53217165 -32221315 - L1MA4 LINE L1 -36 6267 6185 258 328 105 12 chr17 53218393 53218564 -32219916 + MER117 DNA MER1_type 10 196 -1 264 257 14 0 chr17 53219115 53219189 -32219291 - L1MC5 LINE L1 -74 7887 7813 1954 173 29 9 chr17 53219270 53219715 -32218765 - L1MB7 LINE L1 0 6184 5731 2675 164 20 63 chr17 53219715 53219940 -32218540 - L1MA4A LINE L1 -87 6216 5983 2060 119 30 7 chr17 53219940 53220242 -32218238 + AluSc SINE Alu 1 309 0 2675 164 20 63 chr17 53220242 53220668 -32217812 - L1MA4A LINE L1 -320 5983 5593 3829 136 44 35 chr17 53220711 53221459 -32217021 - L1MA3 LINE L1 0 7724 6970 6011 178 13 47 chr17 53221460 53222900 -32215580 - L1MA3 LINE L1 -897 6668 5277 * 15332 178 31 8 chr17 53222898 53225147 -32213333 - L1MA3 LINE L1 -2507 5058 2862 441 0 0 0 chr17 53225147 53225196 -32213284 + (TG)n Simple_repeat Simple_repeat 2 50 0 15332 178 31 8 chr17 53225196 53225207 -32213273 - L1MA3 LINE L1 -4703 2862 2853 2105 84 11 0 chr17 53225207 53225470 -32213010 - AluY SINE Alu -45 266 1 15332 178 31 8 chr17 53225470 53227397 -32211083 - L1MA3 LINE L1 -4712 2853 769 22079 153 11 9 chr17 53227399 53231127 -32207353 + HERVE LTR ERV1 1655 5387 -2426 244 263 175 26 chr17 53231416 53231530 -32206950 + MIR SINE MIR 120 250 -12 262 256 22 0 chr17 53231534 53231624 -32206856 + MER103 DNA DNA 60 151 -15 363 272 96 100 chr17 53232841 53232961 -32205519 + L1ME4a LINE L1 5635 5754 -367 868 127 16 0 chr17 53232961 53233087 -32205393 + FLAM_C SINE Alu 1 128 -5 363 272 96 100 chr17 53233087 53233444 -32205036 + L1ME4a LINE L1 5754 6110 -11 181 345 130 24 chr17 53233534 53233780 -32204700 + L2 LINE L2 1721 1992 -1322 223 333 54 34 chr17 53233839 53233986 -32204494 + L2 LINE L2 3164 3313 0 2913 135 56 48 chr17 53234113 53234633 -32203847 - MER1A DNA MER1_type 0 527 4 193 29 59 0 chr17 53235874 53235908 -32202572 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 318 293 77 66 chr17 53236090 53236121 -32202359 - MIR SINE MIR -15 247 218 1824 154 62 14 chr17 53236121 53236479 -32202001 - THE1C LTR MaLR 0 375 1 318 293 77 66 chr17 53236479 53236628 -32201852 - MIR SINE MIR -44 218 65 521 275 132 90 chr17 53237021 53237844 -32200636 - HAL1 LINE L1 -1485 1022 165 813 293 65 32 chr17 53238129 53238154 -32200326 + MLT1A2 LTR MaLR 23 46 -328 1941 118 73 20 chr17 53238154 53238510 -32199970 - THE1C LTR MaLR 0 375 1 813 293 65 32 chr17 53238510 53238825 -32199655 + MLT1A2 LTR MaLR 46 374 0 401 285 47 47 chr17 53238826 53238998 -32199482 + MLT1J2 LTR MaLR 272 443 -7 1914 131 23 81 chr17 53240149 53240334 -32198146 + THE1C LTR MaLR 1 152 -223 1897 128 7 14 chr17 53240334 53240622 -32197858 + AluSx SINE Alu 3 288 -24 1914 131 23 81 chr17 53240622 53240833 -32197647 + THE1C LTR MaLR 152 374 -1 23 0 0 0 chr17 53241313 53241336 -32197144 + AT_rich Low_complexity Low_complexity 1 23 0 308 231 94 17 chr17 53243134 53243251 -32195229 - L1ME1 LINE L1 -5 6161 6036 211 235 49 62 chr17 53245663 53245744 -32192736 - MIR SINE MIR -14 248 169 324 0 0 0 chr17 53246907 53246943 -32191537 + (TC)n Simple_repeat Simple_repeat 1 36 0 306 0 0 0 chr17 53246942 53246976 -32191504 + (CA)n Simple_repeat Simple_repeat 1 34 0 * 458 339 17 23 chr17 53246991 53247168 -32191312 - MER5B DNA MER1_type -1 177 2 542 258 152 0 chr17 53247181 53247332 -32191148 - MER5A DNA MER1_type -6 183 10 8921 25 0 0 chr17 53247353 53248399 -32190081 - L1PA3 LINE L1 -1564 4582 3537 7614 21 2 4 chr17 53248399 53249985 -32188495 + L1PA3 LINE L1 4572 6155 0 818 94 15 11 chr17 53250012 53250138 -32188342 - MLT2A2 LTR ERVL 0 453 336 884 121 99 161 chr17 53250139 53250412 -32188068 + LTR12 LTR ERV1 22 277 -437 339 202 40 30 chr17 53250412 53250511 -32187969 + LTR30 LTR ERV1 544 643 -79 540 107 0 0 chr17 53250513 53250588 -32187892 + LTR12 LTR ERV1 615 689 -25 1388 126 36 0 chr17 53250588 53250810 -32187670 - MLT2A2 LTR ERVL -223 230 1 2121 117 13 3 chr17 53252450 53252758 -32185722 + AluY SINE Alu 1 311 0 185 65 32 0 chr17 53252841 53252872 -32185608 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 208 400 41 7 chr17 53254426 53254571 -32183909 - L2 LINE L2 -199 3073 2924 541 320 132 55 chr17 53254610 53255188 -32183292 - L2 LINE L2 -447 2867 2246 276 277 59 20 chr17 53255194 53255295 -32183185 - MIR SINE MIR -2 260 156 342 299 0 0 chr17 53255463 53255550 -32182930 + MIR SINE MIR 70 156 -106 221 329 0 0 chr17 53255921 53255994 -32182486 - L2 LINE L2 -1228 2086 2014 2259 112 3 0 chr17 53256587 53256892 -32181588 - AluSx SINE Alu -6 306 1 321 311 53 0 chr17 53257375 53257526 -32180954 - MER103 DNA DNA -7 159 1 292 288 61 102 chr17 53257555 53257819 -32180661 - MIR SINE MIR -8 254 2 205 266 0 0 chr17 53259078 53259142 -32179338 + T-rich Low_complexity Low_complexity 1 64 0 2575 225 87 20 chr17 53259175 53260137 -32178343 - L1MD2 LINE L1 -217 6142 5055 318 253 61 30 chr17 53260419 53260518 -32177962 - L2 LINE L2 -3 3310 3209 1473 197 75 6 chr17 53260550 53260885 -32177595 + MER46B DNA MER2_type 1 233 -3 378 0 0 0 chr17 53260885 53260927 -32177553 + (TG)n Simple_repeat Simple_repeat 2 43 0 28 29 0 0 chr17 53261253 53261288 -32177192 + AT_rich Low_complexity Low_complexity 1 35 0 1308 324 24 29 chr17 53261465 53262055 -32176425 + L1PA13 LINE L1 788 1374 -6200 328 356 3 9 chr17 53262107 53262296 -32176184 + L1PA13 LINE L1 2084 2303 -5271 2983 207 36 6 chr17 53262527 53264020 -32174460 + L1PA15 LINE L1 2182 3897 -3687 1916 155 53 14 chr17 53264020 53264381 -32174099 + THE1C LTR MaLR 1 375 0 7496 155 49 36 chr17 53264381 53265940 -32172540 + MSTA-int LTR MaLR 1 1580 0 2049 131 133 21 chr17 53265940 53266323 -32172157 + MSTA LTR MaLR 1 426 -2 387 49 246 0 chr17 53266323 53266384 -32172096 - MADE1 DNA Mariner 0 80 5 3381 227 19 11 chr17 53266403 53267261 -32171219 + L1PA15 LINE L1 5795 6659 -925 231 163 0 0 chr17 53267362 53267405 -32171075 + L1PA14 LINE L1 6114 6156 -5 1061 203 30 135 chr17 53268343 53268547 -32169933 - MER82 DNA MER2_type -1 652 428 2850 139 14 62 chr17 53268547 53269131 -32169349 + L1PA15 LINE L1 7040 7595 -8 1148 138 78 0 chr17 53269138 53269370 -32169110 + L1MA3 LINE L1 6056 6305 0 1061 203 30 135 chr17 53269370 53269381 -32169099 - MER82 DNA MER2_type -231 422 411 2291 123 0 0 chr17 53269381 53269691 -32168789 + AluSg SINE Alu 1 310 0 1061 203 30 135 chr17 53269691 53269836 -32168644 - MER82 DNA MER2_type -242 411 322 26 0 0 0 chr17 53269888 53269914 -32168566 + AT_rich Low_complexity Low_complexity 1 26 0 239 322 138 16 chr17 53270169 53270361 -32168119 - MIR SINE MIR -17 245 32 268 303 68 15 chr17 53270771 53270903 -32167577 + HAL1 LINE L1 2 140 -2367 184 77 51 0 chr17 53271798 53271837 -32166643 + (TA)n Simple_repeat Simple_repeat 1 41 0 470 300 140 0 chr17 53271918 53272161 -32166319 + HAL1 LINE L1 1483 1759 -748 2095 166 28 30 chr17 53272562 53272959 -32165521 - MSTD LTR MaLR 0 396 1 700 319 92 15 chr17 53275668 53276006 -32162474 + LTR16A LTR ERVL 8 371 -79 369 0 0 0 chr17 53276071 53276112 -32162368 + (TG)n Simple_repeat Simple_repeat 2 42 0 269 287 172 8 chr17 53276172 53276294 -32162186 + MIR SINE MIR 119 260 -2 298 335 137 18 chr17 53278802 53279029 -32159451 - MIR SINE MIR -7 255 2 410 292 9 0 chr17 53280567 53280680 -32157800 - MIR SINE MIR -1 261 148 232 382 37 16 chr17 53280675 53280866 -32157614 + MIR SINE MIR 49 243 -19 * 21 36 0 0 chr17 53282625 53282653 -32155827 + AT_rich Low_complexity Low_complexity 1 28 0 4085 131 17 2 chr17 53282754 53283356 -32155124 - LTR9 LTR ERV1 0 612 2 287 346 90 28 chr17 53283794 53284115 -32154365 - L2 LINE L2 -880 2434 2094 359 157 14 0 chr17 53284987 53285057 -32153423 + GA-rich Low_complexity Low_complexity 2 72 0 346 267 28 108 chr17 53285359 53285535 -32152945 - MLT1H LTR MaLR -15 534 373 586 317 6 16 chr17 53285612 53285795 -32152685 - MLT1H LTR MaLR -298 251 71 315 241 28 19 chr17 53285973 53286081 -32152399 + MLT1L LTR MaLR 507 615 0 7626 27 0 0 chr17 53287085 53288145 -32150335 - L1PA3 LINE L1 -5 6150 5092 19279 26 2 0 chr17 53288145 53290465 -32148015 + L1PA3 LINE L1 2775 5099 -1047 31 26 0 0 chr17 53290655 53290693 -32147787 + AT_rich Low_complexity Low_complexity 1 38 0 298 0 48 0 chr17 53291082 53291124 -32147356 + (TA)n Simple_repeat Simple_repeat 1 44 0 2268 170 101 13 chr17 53291276 53291753 -32146727 + LTR44 LTR ERV1 1 519 0 224 308 0 0 chr17 53292448 53292513 -32145967 + GA-rich Low_complexity Low_complexity 2 66 0 201 250 0 18 chr17 53292760 53292816 -32145664 + L2 LINE L2 3217 3271 -1 204 302 54 94 chr17 53293517 53293644 -32144836 + MIR3 SINE MIR 48 168 -40 545 272 146 0 chr17 53293644 53293802 -32144678 - MER5A DNA MER1_type 0 189 9 2159 282 39 38 chr17 53296757 53297545 -32140935 + L1M3b LINE L1 5 793 -5488 1106 279 16 103 chr17 53297781 53298040 -32140440 + L1M3b LINE L1 837 1014 -5267 1476 234 111 27 chr17 53298040 53298634 -32139846 - LTR48B LTR ERV1 0 644 1 1106 279 16 103 chr17 53298634 53298984 -32139496 + L1M3b LINE L1 1014 1393 -4888 1071 204 0 24 chr17 53298984 53299195 -32139285 - AluJo SINE Alu -13 299 94 1906 158 49 30 chr17 53299195 53299561 -32138919 - THE1C LTR MaLR 0 375 3 6285 152 12 41 chr17 53299563 53300681 -32137799 - THE1C-int LTR MaLR 0 1580 495 1542 256 56 40 chr17 53300688 53301387 -32137093 + L1M3b LINE L1 1461 2170 -4181 235 339 8 8 chr17 53301374 53301495 -32136985 + L1ME LINE L1 1441 1561 -4835 * 24 53 0 0 chr17 53301743 53301781 -32136699 + AT_rich Low_complexity Low_complexity 1 38 0 381 267 128 30 chr17 53302548 53302814 -32135666 + L1ME LINE L1 2958 3249 -2966 26 50 0 0 chr17 53302818 53302858 -32135622 + AT_rich Low_complexity Low_complexity 1 40 0 265 302 107 16 chr17 53303054 53303306 -32135174 + L1ME LINE L1 3788 4062 -2153 729 287 138 12 chr17 53303324 53303578 -32134902 + MLT1J1 LTR MaLR 21 306 -140 233 274 139 50 chr17 53303886 53304492 -32133988 + L1ME LINE L1 4813 5472 -743 319 283 189 6 chr17 53304606 53304765 -32133715 + L1ME LINE L1 5636 5823 -416 377 318 194 9 chr17 53304883 53305100 -32133380 + MIR SINE MIR 6 262 0 23 78 0 0 chr17 53305174 53305225 -32133255 + AT_rich Low_complexity Low_complexity 1 51 0 269 262 146 0 chr17 53356952 53357055 -32081425 - MIR SINE MIR -3 259 142 14844 135 21 60 chr17 53357157 53360133 -32078347 - L1P LINE L1 -3273 2873 14 37 0 0 0 chr17 53360524 53360561 -32077919 + AT_rich Low_complexity Low_complexity 1 37 0 5196 231 63 30 chr17 53360572 53360885 -32077595 + L1PBa LINE L1 37 338 -6525 2251 95 20 0 chr17 53360885 53361180 -32077300 + AluSg SINE Alu 1 301 -9 5196 231 63 30 chr17 53361180 53363775 -32074705 + L1PBa LINE L1 338 2102 -4761 704 126 0 0 chr17 53363776 53363879 -32074601 + AluSg SINE Alu 1 103 -207 1312 194 0 23 chr17 53364163 53364426 -32074054 + MLT1A1 LTR MaLR 109 365 0 606 385 26 16 chr17 53366407 53366789 -32071691 + L2 LINE L2 2568 2953 -361 447 194 0 0 chr17 53367521 53367619 -32070861 + (TA)n Simple_repeat Simple_repeat 1 98 0 3892 208 87 24 chr17 53367732 53367987 -32070493 + L1PB3 LINE L1 1830 2067 -4795 2023 141 0 10 chr17 53367987 53368299 -32070181 + AluSg SINE Alu 1 309 -1 3892 208 87 24 chr17 53368299 53369477 -32069003 + L1PB3 LINE L1 2067 3357 -3505 * 8527 192 23 17 chr17 53369459 53372315 -32066165 + L1PB3 LINE L1 3806 6686 -184 2291 98 0 3 chr17 53372315 53372610 -32065870 + AluSq SINE Alu 1 294 -19 8527 192 23 17 chr17 53372610 53372797 -32065683 + L1PB3 LINE L1 6686 6870 0 4141 132 12 1 chr17 53373697 53374580 -32063900 + L1PA15 LINE L1 4996 5889 -276 2137 149 8 31 chr17 53374580 53374828 -32063652 + L1PA15 LINE L1 5788 6026 -139 2000 145 11 0 chr17 53374828 53375138 -32063342 + AluSx SINE Alu 1 313 0 2137 149 8 31 chr17 53375138 53375270 -32063210 + L1PA15 LINE L1 6026 6160 -5 2145 230 60 8 chr17 53377651 53378238 -32060242 + L1MD3 LINE L1 7359 7975 -20 1497 179 69 10 chr17 53378570 53378861 -32059619 + AluSx SINE Alu 1 308 -4 260 250 61 53 chr17 53379662 53379794 -32058686 + MER94 DNA DNA 1 133 -1 22 56 0 0 chr17 53379856 53379892 -32058588 + AT_rich Low_complexity Low_complexity 1 36 0 199 255 0 0 chr17 53381020 53381067 -32057413 + MER5B DNA MER1_type 132 178 0 22 0 0 0 chr17 53383941 53383963 -32054517 + AT_rich Low_complexity Low_complexity 1 22 0 243 219 10 42 chr17 53384764 53384860 -32053620 - Charlie7 DNA MER1_type -47 2565 2473 301 175 48 0 chr17 53384883 53384986 -32053494 + (TA)n Simple_repeat Simple_repeat 2 109 0 680 175 0 35 chr17 53385043 53385266 -32053214 + MER6 DNA MER2_type 268 832 -33 513 0 0 0 chr17 53386916 53386973 -32051507 + (TTTTC)n Simple_repeat Simple_repeat 2 58 0 1643 170 0 18 chr17 53386982 53387265 -32051215 - AluJb SINE Alu -33 279 2 2054 127 0 48 chr17 53387273 53387589 -32050891 - AluSx SINE Alu -11 301 1 922 238 47 0 chr17 53387726 53387940 -32050540 + MER58A DNA MER1_type 1 224 0 401 346 11 39 chr17 53387956 53388138 -32050342 - MIR3 SINE MIR -11 197 21 405 0 0 0 chr17 53388327 53388372 -32050108 + (CA)n Simple_repeat Simple_repeat 1 45 0 1000 297 82 47 chr17 53388563 53388931 -32049549 - L1ME3A LINE L1 -222 5948 5594 1990 134 0 33 chr17 53388931 53389236 -32049244 + AluSx SINE Alu 2 296 -16 450 0 0 0 chr17 53389237 53389287 -32049193 + (TA)n Simple_repeat Simple_repeat 1 50 0 1000 297 82 47 chr17 53389287 53390195 -32048285 - L1ME3A LINE L1 -575 5595 4629 3281 246 95 53 chr17 53390205 53392643 -32045837 + L1MB1 LINE L1 7 2155 -3815 569 301 19 9 chr17 53392743 53392959 -32045521 + L1MB1 LINE L1 2348 2565 -3405 6009 134 13 8 chr17 53392980 53393962 -32044518 - L1MA2 LINE L1 0 6304 5318 5313 127 11 71 chr17 53393965 53395613 -32042867 - L1PA13 LINE L1 -11 6152 4560 916 185 98 5 chr17 53395614 53395798 -32042682 - MSTB LTR MaLR -2 424 224 4791 121 23 5 chr17 53395798 53396590 -32041890 - L1M1 LINE L1 -4797 2768 1963 8298 211 74 13 chr17 53396593 53398380 -32040100 - L1M1 LINE L1 -5657 1908 12 2870 232 19 16 chr17 53398378 53399187 -32039293 + L1MB1 LINE L1 2573 3383 -2587 * 299 242 0 11 chr17 53399208 53399299 -32039181 - L1M4 LINE L1 -2171 3975 3886 3031 100 5 5 chr17 53399428 53399859 -32038621 - L1PA13 LINE L1 -20 6143 5713 2457 231 32 13 chr17 53399849 53400478 -32038002 + L1MB1 LINE L1 3416 4056 -1914 * 3445 200 49 50 chr17 53400480 53401498 -32036982 + L1MB1 LINE L1 4751 5768 -224 3054 155 0 4 chr17 53401498 53401995 -32036485 - LOR1a LTR ERV1 0 497 3 3445 200 49 50 chr17 53401995 53402216 -32036264 + L1MB1 LINE L1 5768 5988 -4 473 260 32 53 chr17 53402282 53402537 -32035943 - L1ME3 LINE L1 0 6239 5993 377 258 139 25 chr17 53402554 53402855 -32035625 - L1M4c LINE L1 -4953 1431 1100 25 0 0 0 chr17 53402859 53402884 -32035596 + AT_rich Low_complexity Low_complexity 1 25 0 393 22 0 0 chr17 53403108 53403154 -32035326 + (TC)n Simple_repeat Simple_repeat 1 46 0 270 151 38 0 chr17 53403295 53403348 -32035132 - MLT1J2 LTR MaLR -395 55 1 566 129 35 26 chr17 53403571 53403687 -32034793 - L1MA8 LINE L1 -1 6290 6174 256 256 22 33 chr17 53404262 53404352 -32034128 + L2 LINE L2 2667 2755 -559 184 271 119 93 chr17 53404690 53404808 -32033672 + L2 LINE L2 3151 3271 -1 434 299 73 42 chr17 53405315 53405603 -32032877 - MLT1I LTR MaLR 0 409 113 206 339 0 0 chr17 53405948 53406010 -32032470 + MIR SINE MIR 86 147 -61 240 320 0 0 chr17 53406408 53406483 -32031997 + MIR SINE MIR 183 257 -5 4777 65 23 14 chr17 53406497 53407165 -32031315 - L1P LINE L1 -2545 3601 2925 1692 131 0 67 chr17 53407165 53407493 -32030987 - AluY SINE Alu -1 310 5 4777 65 23 14 chr17 53407493 53407517 -32030963 - L1P LINE L1 -3221 2925 2903 230 178 0 22 chr17 53407848 53407893 -32030587 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 6679 45 5 1 chr17 53407898 53408712 -32029768 - L1PA6 LINE L1 -4 6150 5334 455 0 18 0 chr17 53409102 53409157 -32029323 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 2234 94 0 16 chr17 53409157 53409464 -32029016 + AluSg SINE Alu 1 302 -8 284 264 94 19 chr17 53410834 53410993 -32027487 - L1ME3 LINE L1 -260 5930 5760 1119 210 99 56 chr17 53411042 53411366 -32027114 + MER2 DNA MER2_type 6 343 -2 363 96 0 0 chr17 53411537 53411589 -32026891 + (TA)n Simple_repeat Simple_repeat 2 53 0 24 0 0 0 chr17 53411937 53411961 -32026519 + AT_rich Low_complexity Low_complexity 1 24 0 238 253 12 12 chr17 53412312 53412395 -32026085 - L1ME3 LINE L1 -1537 4678 4596 21 0 0 0 chr17 53412823 53412844 -32025636 + AT_rich Low_complexity Low_complexity 1 21 0 282 297 86 57 chr17 53412964 53413139 -32025341 + L2 LINE L2 3123 3302 -11 2912 95 5 0 chr17 53413573 53413984 -32024496 + L1PA14 LINE L1 5746 6158 -3 2432 244 68 17 chr17 53414210 53415230 -32023250 - L1ME1 LINE L1 -5 6161 5090 * 5257 261 42 41 chr17 53415228 53417078 -32021402 - L1ME3 LINE L1 -1590 4625 2779 734 254 91 0 chr17 53417078 53417275 -32021205 + MER58C DNA MER1_type 1 215 0 5257 261 42 41 chr17 53417275 53417687 -32020793 - L1ME3 LINE L1 -3436 2779 2357 2327 69 7 16 chr17 53417687 53417992 -32020488 - AluY SINE Alu -9 302 1 5257 261 42 41 chr17 53417992 53418153 -32020327 - L1ME3 LINE L1 -3858 2357 2198 25 0 0 0 chr17 53418244 53418269 -32020211 + AT_rich Low_complexity Low_complexity 1 25 0 240 232 21 11 chr17 53418340 53418435 -32020045 + L1MEc LINE L1 1408 1503 -4893 233 348 51 0 chr17 53418508 53418626 -32019854 + L1MEc LINE L1 1633 1756 -4640 * 1952 259 87 27 chr17 53418624 53419479 -32019001 - L1ME3 LINE L1 -5148 1248 343 2286 211 75 19 chr17 53419981 53420502 -32017978 - MER82 DNA MER2_type -6 647 98 435 19 0 0 chr17 53420519 53420571 -32017909 + (TG)n Simple_repeat Simple_repeat 2 53 0 1712 264 18 13 chr17 53421572 53422019 -32016461 + MER74B LTR ERVL 1 449 -173 277 213 238 16 chr17 53422778 53422900 -32015580 + MIR SINE MIR 113 261 -1 697 368 106 0 chr17 53423186 53423602 -32014878 - L2 LINE L2 -350 2964 2505 645 312 151 46 chr17 53423893 53424418 -32014062 + Charlie2 DNA MER1_type 53 632 -2150 273 310 0 20 chr17 53424447 53424547 -32013933 + CT-rich Low_complexity Low_complexity 1 98 0 2280 239 71 47 chr17 53424558 53425517 -32012963 + Charlie2a DNA MER1_type 1620 2607 -255 1717 147 16 58 chr17 53425517 53425710 -32012770 - AluSx SINE Alu -13 299 122 431 18 18 0 chr17 53425710 53425766 -32012714 + (TTA)n Simple_repeat Simple_repeat 1 57 0 1717 147 16 58 chr17 53425766 53425884 -32012596 - AluSx SINE Alu -190 122 1 2280 239 71 47 chr17 53425884 53425961 -32012519 + Charlie2a DNA MER1_type 2607 2681 -181 2012 187 18 10 chr17 53425962 53426358 -32012122 - L1MA7 LINE L1 -321 5970 5572 1637 171 8 34 chr17 53426358 53426737 -32011743 + L1MA7 LINE L1 5921 6290 -1 426 187 28 19 chr17 53426750 53426857 -32011623 + Charlie2a DNA MER1_type 2674 2781 -81 30 69 0 0 chr17 53426885 53426943 -32011537 + AT_rich Low_complexity Low_complexity 1 58 0 216 143 0 0 chr17 53426951 53426993 -32011487 + (TA)n Simple_repeat Simple_repeat 2 43 0 1251 342 68 34 chr17 53427014 53427975 -32010505 - ERVL LTR ERVL -2725 3039 2047 4522 91 27 0 chr17 53429751 53430413 -32008067 + L1MA1 LINE L1 5618 6297 -5 217 135 19 39 chr17 53430417 53430469 -32008011 + A-rich Low_complexity Low_complexity 2 52 0 4935 140 65 104 chr17 53431694 53433024 -32005456 + MER52C LTR ERV1 1 1278 0 235 228 51 38 chr17 53433121 53433200 -32005280 + L3 LINE CR1 1495 1574 -3 180 0 0 0 chr17 53434104 53434124 -32004356 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 234 0 0 0 chr17 53434123 53434149 -32004331 + (TG)n Simple_repeat Simple_repeat 1 26 0 248 290 80 70 chr17 53434375 53434575 -32003905 - MIR SINE MIR -33 229 28 399 245 21 0 chr17 53434929 53435023 -32003457 - MIR SINE MIR -1 261 166 520 308 104 24 chr17 53435465 53436054 -32002426 - L1ME2 LINE L1 -217 5947 5317 353 270 98 63 chr17 53436233 53436518 -32001962 - L1ME2 LINE L1 -1249 4897 4603 1124 138 5 20 chr17 53436550 53436745 -32001735 - AluJb SINE Alu -10 302 111 1729 71 53 0 chr17 53436845 53437071 -32001409 - AluY SINE Alu -73 238 1 258 369 89 11 chr17 53437525 53437704 -32000776 + L2 LINE L2 203 395 -2919 248 406 57 14 chr17 53437712 53437993 -32000487 + L2 LINE L2 865 1157 -2157 1152 260 140 6 chr17 53438015 53438350 -32000130 + MSTD LTR MaLR 17 396 0 315 332 79 5 chr17 53438355 53438545 -31999935 + L2 LINE L2 1314 1517 -1797 739 227 40 6 chr17 53438565 53438741 -31999739 - MER5A DNA MER1_type 0 189 8 218 318 88 73 chr17 53438821 53439205 -31999275 + L2 LINE L2 1631 2020 -1294 21 0 0 0 chr17 53439305 53439326 -31999154 + AT_rich Low_complexity Low_complexity 1 21 0 633 367 109 42 chr17 53439704 53440754 -31997726 - L2 LINE L2 -2126 1188 69 450 291 39 56 chr17 53441704 53441883 -31996597 + MIR SINE MIR 37 212 -50 220 299 52 41 chr17 53442537 53442634 -31995846 - MIR SINE MIR -72 136 39 521 354 62 59 chr17 53443698 53444054 -31994426 - L2 LINE L2 0 3272 2916 225 0 0 0 chr17 53444680 53444705 -31993775 + (TG)n Simple_repeat Simple_repeat 2 26 0 188 162 27 0 chr17 53444853 53444890 -31993590 - MIR SINE MIR -10 252 215 2124 195 92 35 chr17 53445521 53446024 -31992456 + MLT2B3 LTR ERVL 1 554 0 1552 177 9 54 chr17 53446069 53446386 -31992094 - AluJb SINE Alu -9 303 1 382 292 50 25 chr17 53447098 53447259 -31991221 - MER5A DNA MER1_type -21 168 4 2558 52 0 0 chr17 53447601 53447955 -31990525 - AluY SINE Alu 0 354 1 645 309 63 9 chr17 53448751 53448974 -31989506 - MIR SINE MIR -25 237 3 337 265 92 10 chr17 53449112 53449210 -31989270 + MLT1I LTR MaLR 70 175 -234 988 241 14 0 chr17 53449428 53449644 -31988836 + MER20 DNA MER1_type 1 219 0 2156 126 7 7 chr17 53449706 53450015 -31988465 + AluSx SINE Alu 1 309 -3 225 0 0 0 chr17 53450229 53450254 -31988226 + (A)n Simple_repeat Simple_repeat 1 25 0 959 251 5 0 chr17 53450711 53450930 -31987550 - MER58A DNA MER1_type -2 222 3 519 168 63 0 chr17 53451072 53451167 -31987313 + MER20 DNA MER1_type 118 218 -1 404 252 0 19 chr17 53451180 53451283 -31987197 + MER5A DNA MER1_type 11 111 -78 182 348 58 36 chr17 53452771 53452909 -31985571 - L2 LINE L2 0 3272 3132 2126 105 0 27 chr17 53452974 53453268 -31985212 + AluSx SINE Alu 3 288 -24 347 314 24 8 chr17 53454781 53454905 -31983575 + MIR SINE MIR 79 204 -58 268 158 0 60 chr17 53454905 53455038 -31983442 + (TA)n Simple_repeat Simple_repeat 1 125 0 1799 148 62 15 chr17 53455486 53455811 -31982669 - MER61A LTR ERV1 0 343 4 15580 96 29 29 chr17 53455812 53456367 -31982113 - MER61A-int LTR ERV1 -1221 4949 4395 1577 118 126 0 chr17 53456367 53456492 -31981988 - AluSc SINE Alu -12 287 179 405 0 0 0 chr17 53456492 53456537 -31981943 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1577 118 126 0 chr17 53456537 53456666 -31981814 - AluSc SINE Alu -120 179 1 15580 96 29 29 chr17 53456666 53458648 -31979832 - MER61A-int LTR ERV1 -1775 4395 1655 288 149 0 0 chr17 53458646 53458693 -31979787 - MER61A-int LTR ERV1 -3851 1366 1320 * 390 158 40 26 chr17 53458723 53458799 -31979681 - MER61A-int LTR ERV1 -4510 707 631 1593 162 52 31 chr17 53458882 53458919 -31979561 - MER61A-int LTR ERV1 -4718 499 464 2215 115 0 7 chr17 53458919 53459224 -31979256 + AluSx SINE Alu 1 303 -9 1593 162 52 31 chr17 53459224 53459602 -31978878 - MER61A-int LTR ERV1 -4753 464 1 1595 164 54 30 chr17 53459602 53459937 -31978543 - MER61A LTR ERV1 0 343 1 1330 173 53 43 chr17 53460241 53460541 -31977939 - THE1C LTR MaLR -72 303 1 204 191 0 24 chr17 53460738 53460780 -31977700 + L2 LINE L2 3257 3297 -16 2064 78 0 0 chr17 53461588 53461859 -31976621 + L1PA8 LINE L1 5901 6171 -1 786 218 62 6 chr17 53463177 53463356 -31975124 + MER5A DNA MER1_type 1 189 0 2403 147 23 2 chr17 53463627 53464156 -31974324 - L1PA16 LINE L1 -9 6157 5523 230 364 0 0 chr17 53464194 53464271 -31974209 + L2 LINE L2 3234 3310 -3 22 35 0 0 chr17 53464289 53464318 -31974162 + AT_rich Low_complexity Low_complexity 1 29 0 905 190 0 6 chr17 53466868 53467031 -31971449 + FRAM SINE Alu 1 155 -21 1631 231 39 63 chr17 53468439 53468929 -31969551 - MLT2B1 LTR ERVL -42 478 1 225 0 0 0 chr17 53469596 53469621 -31968859 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1757 60 0 0 chr17 53469621 53469838 -31968642 - L1PA8 LINE L1 -16 6156 5940 22 0 0 0 chr17 53470367 53470389 -31968091 + AT_rich Low_complexity Low_complexity 1 22 0 2195 260 57 53 chr17 53470726 53472144 -31966336 - L1ME2 LINE L1 -19 6145 4737 23 0 0 0 chr17 53473381 53473404 -31965076 + AT_rich Low_complexity Low_complexity 1 23 0 180 291 0 0 chr17 53473509 53473564 -31964916 - L3b LINE CR1 -188 1395 1341 40 37 0 0 chr17 53473823 53473877 -31964603 + AT_rich Low_complexity Low_complexity 1 54 0 537 76 13 13 chr17 53473884 53473963 -31964517 + MLT2A1 LTR ERVL 127 205 -239 890 179 0 0 chr17 53474021 53474166 -31964314 + L1PA13 LINE L1 1457 1601 -5186 1408 233 35 43 chr17 53474213 53474587 -31963893 + MLT1A2 LTR MaLR 4 374 0 3022 81 37 5 chr17 53474591 53474981 -31963499 + MLT2A1 LTR ERVL 1 408 -36 216 0 0 0 chr17 53474981 53475005 -31963475 + (TCTA)n Simple_repeat Simple_repeat 3 26 0 3022 81 37 5 chr17 53475005 53475044 -31963436 + MLT2A1 LTR ERVL 408 444 0 5861 120 186 15 chr17 53475407 53476496 -31961984 + MER52C LTR ERV1 4 1278 0 380 345 185 21 chr17 53476496 53476777 -31961703 + LTR33 LTR ERVL 28 354 -167 32 0 0 0 chr17 53477159 53477191 -31961289 + AT_rich Low_complexity Low_complexity 1 32 0 2187 124 3 0 chr17 53477221 53477527 -31960953 + AluSq SINE Alu 1 307 -6 504 254 32 0 chr17 53477540 53477666 -31960814 - MER21B LTR ERV1 -73 790 661 1125 270 87 17 chr17 53477669 53478014 -31960466 - MER21B LTR ERV1 -402 461 93 771 207 7 0 chr17 53478249 53478394 -31960086 - MLT1C LTR MaLR -321 146 1 738 110 0 0 chr17 53478548 53478648 -31959832 + AluSg/x SINE Alu 198 297 -15 858 126 0 0 chr17 53479317 53479452 -31959028 + (GAAA)n Simple_repeat Simple_repeat 4 138 0 671 336 81 17 chr17 53479553 53480038 -31958442 + HERVL LTR ERVL 4321 4823 -831 254 306 0 0 chr17 53480855 53480917 -31957563 + L2 LINE L2 3195 3256 -16 21 0 0 0 chr17 53481393 53481414 -31957066 + AT_rich Low_complexity Low_complexity 1 21 0 225 143 0 32 chr17 53482159 53482222 -31956258 - L1MC4 LINE L1 -1342 6700 6640 1287 201 83 21 chr17 53482356 53482732 -31955748 - MER67C LTR ERV1 -247 267 1 255 157 0 0 chr17 53483377 53483428 -31955052 + CT-rich Low_complexity Low_complexity 2 52 0 256 351 29 12 chr17 53483764 53483935 -31954545 - L1ME3A LINE L1 -9 6161 5988 3731 21 0 8 chr17 53534274 53534757 -31903723 + L1P LINE L1 2903 3381 -2765 340 45 0 0 chr17 53535355 53535435 -31903045 + L1PA3 LINE L1 6099 6178 0 22 0 0 0 chr17 53535497 53535519 -31902961 + AT_rich Low_complexity Low_complexity 1 22 0 244 255 69 36 chr17 53536163 53536379 -31902101 + L1MEc LINE L1 1263 1519 -4938 205 345 59 8 chr17 53536639 53536758 -31901722 - MIR SINE MIR -56 206 82 26 0 0 0 chr17 53536768 53536794 -31901686 + AT_rich Low_complexity Low_complexity 1 26 0 201 94 0 0 chr17 53536948 53536980 -31901500 + (TTTTTA)n Simple_repeat Simple_repeat 1 32 0 776 196 141 16 chr17 53537110 53537294 -31901186 + MER20 DNA MER1_type 1 207 -12 190 331 102 32 chr17 53537861 53538018 -31900462 + MIR SINE MIR 76 243 -19 604 88 20 10 chr17 53538139 53538241 -31900239 - L1PB1 LINE L1 -105 6046 5944 689 109 0 0 chr17 53538246 53538347 -31900133 + L1PB1 LINE L1 6047 6147 -4 32 0 0 0 chr17 53538348 53538380 -31900100 + AT_rich Low_complexity Low_complexity 1 32 0 1983 125 0 0 chr17 53538978 53539259 -31899221 + AluSg SINE Alu 21 301 -9 291 175 0 0 chr17 53539259 53539316 -31899164 + GA-rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr17 53539357 53539388 -31899092 + AT_rich Low_complexity Low_complexity 1 31 0 385 360 29 17 chr17 53539393 53539565 -31898915 - MIR3 SINE MIR -24 184 11 2427 42 13 16 chr17 53540078 53540390 -31898090 + AluY SINE Alu 1 311 0 21 36 0 0 chr17 53540701 53540729 -31897751 + AT_rich Low_complexity Low_complexity 1 28 0 618 81 0 0 chr17 53541100 53541186 -31897294 - L1PB3 LINE L1 -2 6152 6067 1224 222 113 19 chr17 53541435 53541859 -31896621 + L1MC4a LINE L1 6864 7327 -481 314 330 80 11 chr17 53542669 53542845 -31895635 + L1MEc LINE L1 3011 3198 -3924 536 100 0 12 chr17 53542864 53542944 -31895536 + MADE1 DNA Mariner 2 80 0 262 149 119 0 chr17 53542957 53543024 -31895456 - MLT1D LTR MaLR -281 224 150 628 275 180 24 chr17 53543055 53543678 -31894802 + L1MEc LINE L1 3168 3955 -2986 1671 213 70 43 chr17 53543678 53544167 -31894313 + MLT1D LTR MaLR 2 503 -2 628 275 180 24 chr17 53544167 53544376 -31894104 + L1MEc LINE L1 3955 4130 -2811 582 117 36 18 chr17 53544378 53544489 -31893991 + L1PA11 LINE L1 6061 6173 -1 1206 81 0 0 chr17 53544550 53544710 -31893770 - AluY SINE Alu -9 302 143 1369 77 0 31 chr17 53544711 53544907 -31893573 - AluY SINE Alu -121 190 1 321 350 0 8 chr17 53544909 53545032 -31893448 + L1MEc LINE L1 4190 4311 -2630 467 279 34 39 chr17 53546427 53546606 -31891874 + MLT1F LTR MaLR 339 516 -26 184 171 29 0 chr17 53546709 53546744 -31891736 - MIR SINE MIR -62 146 111 27 29 0 0 chr17 53548502 53548536 -31889944 + AT_rich Low_complexity Low_complexity 1 34 0 1056 242 21 100 chr17 53548719 53549140 -31889340 + L1M4b LINE L1 42 429 -6430 235 265 0 0 chr17 53549141 53549190 -31889290 + L1M4b LINE L1 483 531 -6328 1090 166 107 39 chr17 53549192 53549509 -31888971 - LTR1B LTR ERV1 0 785 439 3725 94 9 2 chr17 53549663 53550196 -31888284 + MER41A LTR ERV1 18 554 0 1763 134 102 15 chr17 53550281 53550616 -31887864 - LTR1B LTR ERV1 -462 364 1 695 300 54 22 chr17 53550707 53551046 -31887434 + L1M4b LINE L1 652 1224 -5635 651 111 0 10 chr17 53551354 53551453 -31887027 + MER4A LTR ERV1 1 98 -566 2745 108 5 12 chr17 53551453 53551860 -31886620 + MER4A LTR ERV1 261 664 0 1684 293 43 33 chr17 53552033 53553204 -31885276 + L1M4b LINE L1 1239 2420 -4539 501 242 88 16 chr17 53553269 53553463 -31885017 - L1MC/D LINE L1 -781 5855 5648 * 634 252 44 51 chr17 53553441 53553735 -31884745 - L1MC/D LINE L1 -2381 4159 3868 2130 84 10 39 chr17 53553826 53554137 -31884343 + AluY SINE Alu 1 302 -9 444 253 154 13 chr17 53554232 53554465 -31884015 - L1MC/D LINE L1 -3366 3174 2909 230 246 53 0 chr17 53554616 53554673 -31883807 + LTR4 LTR ERV1 298 357 -239 1220 167 97 12 chr17 53554748 53555006 -31883474 + LTR4 LTR ERV1 317 596 0 958 228 55 7 chr17 53555011 53555491 -31882989 - L1MDa LINE L1 -3651 2889 2384 326 196 0 0 chr17 53555499 53555555 -31882925 - LTR8 LTR ERV1 0 691 636 411 141 31 0 chr17 53555555 53555619 -31882861 - AluS SINE Alu -25 285 220 1897 148 3 0 chr17 53555632 53555939 -31882541 - AluSx SINE Alu 0 308 1 2473 178 52 90 chr17 53555940 53556068 -31882412 - LTR8 LTR ERV1 -38 653 522 2180 102 0 10 chr17 53556068 53556371 -31882109 - AluY SINE Alu -11 300 1 2473 178 52 90 chr17 53556371 53556921 -31881559 - LTR8 LTR ERV1 -169 522 1 4313 248 98 75 chr17 53556921 53557334 -31881146 - L1MDa LINE L1 -4162 2378 1976 2238 108 3 0 chr17 53557334 53557639 -31880841 + AluSg SINE Alu 1 306 -4 4313 248 98 75 chr17 53557639 53559023 -31879457 - L1MDa LINE L1 -4564 1976 539 1217 297 40 27 chr17 53559205 53559649 -31878831 + LTR16B LTR ERVL 15 464 0 833 290 108 79 chr17 53559899 53560444 -31878036 + MLT1G LTR MaLR 27 587 -3 1272 208 107 68 chr17 53560498 53560936 -31877544 + MSTB2 LTR MaLR 1 455 -2 22 0 0 0 chr17 53561811 53561833 -31876647 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr17 53563915 53563939 -31874541 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 1407 140 61 54 chr17 53564029 53564173 -31874307 - MER4A LTR ERV1 0 664 522 2209 111 0 0 chr17 53564173 53564470 -31874010 - AluSx SINE Alu -12 300 4 1407 140 61 54 chr17 53564470 53564668 -31873812 - MER4A LTR ERV1 -142 522 261 504 177 10 10 chr17 53564668 53564764 -31873716 - MER4A LTR ERV1 -566 98 3 3490 175 84 27 chr17 53565148 53565929 -31872551 + LTR1B LTR ERV1 1 826 0 3201 146 25 10 chr17 53566207 53566726 -31871754 - MER1A DNA MER1_type 0 527 1 22 0 0 0 chr17 53567055 53567077 -31871403 + AT_rich Low_complexity Low_complexity 1 22 0 361 322 178 0 chr17 53567767 53567941 -31870539 - MIR SINE MIR -6 256 52 3300 18 0 0 chr17 53568320 53568710 -31869770 - L1P LINE L1 -3384 2762 2373 2099 110 17 3 chr17 53568735 53569026 -31869454 + AluSx SINE Alu 1 295 -17 2127 183 37 4 chr17 53569488 53569942 -31868538 - L1MD1 LINE L1 0 6636 6168 1926 213 56 51 chr17 53569968 53570396 -31868084 + MLT2B2 LTR ERVL 30 459 -56 3241 68 2 0 chr17 53570433 53570847 -31867633 + LTR14C LTR ERVK 171 585 -2 237 159 0 0 chr17 53570862 53570906 -31867574 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 418 141 14 0 chr17 53570919 53570990 -31867490 + MLT1A1 LTR MaLR 294 365 0 616 225 40 32 chr17 53570990 53571249 -31867231 - L1MD1 LINE L1 -475 6161 5711 1756 59 0 0 chr17 53571255 53571477 -31867003 - L1PA7 LINE L1 -1 6153 5932 3491 80 14 2 chr17 53571477 53572287 -31866193 + L1P3 LINE L1 4906 5722 -432 752 262 63 40 chr17 53572274 53573005 -31865475 - L1MD1 LINE L1 -804 5736 5023 * 2515 183 99 14 chr17 53573005 53573195 -31865285 + MER6A DNA MER2_type 1 174 -691 279 0 0 0 chr17 53573195 53573226 -31865254 + (GA)n Simple_repeat Simple_repeat 1 31 0 * 315 0 0 0 chr17 53573225 53573260 -31865220 + (TG)n Simple_repeat Simple_repeat 1 35 0 2515 183 99 14 chr17 53573226 53573627 -31864853 + MER6A DNA MER2_type 174 605 0 752 262 63 40 chr17 53573627 53574467 -31864013 - L1MD1 LINE L1 -1517 5023 4085 5723 103 68 2 chr17 53574467 53575672 -31862808 - L1PA13 LINE L1 0 6163 4901 1056 99 0 7 chr17 53575866 53576017 -31862463 - L1PB1 LINE L1 -175 5976 5827 685 212 108 0 chr17 53576023 53576226 -31862254 - L1MD1 LINE L1 -4266 2274 2050 2830 254 97 17 chr17 53577139 53578152 -31860328 - L1MC4 LINE L1 -16 8026 6933 4280 169 31 44 chr17 53578249 53579181 -31859299 - L1MA4 LINE L1 -16 6284 5365 * 5819 198 19 33 chr17 53579161 53580540 -31857940 + L1MA4 LINE L1 3982 5341 -805 626 219 0 0 chr17 53580656 53580775 -31857705 - L1MD3 LINE L1 -1207 6788 6670 241 165 68 117 chr17 53580868 53580971 -31857509 - L1MC4a LINE L1 -1326 6482 6385 4274 72 0 4 chr17 53581148 53581704 -31856776 - MER41A LTR ERV1 0 554 1 1599 93 9 0 chr17 53581704 53581918 -31856562 - MER41A-int LTR ERV1 -2 5944 5729 * 6673 87 32 1 chr17 53581915 53582855 -31855625 - MER41A-int LTR ERV1 -465 5481 4513 1868 179 31 13 chr17 53582855 53583240 -31855240 - L1MA8 LINE L1 -75 6216 5825 1575 139 12 79 chr17 53583247 53583577 -31854903 - MLT2A2 LTR ERVL -145 308 1 1824 297 31 54 chr17 53583578 53584501 -31853979 - L1M3de LINE L1 -5388 1265 4 5329 241 30 8 chr17 53584511 53586615 -31851865 - L1MC1 LINE L1 -506 5896 3742 349 345 18 12 chr17 53587348 53587513 -31850967 - L1MC1 LINE L1 -6195 201 36 465 208 15 69 chr17 53590542 53590672 -31847808 - L2 LINE L2 0 3313 3191 190 339 31 0 chr17 53591146 53591211 -31847269 - L2 LINE L2 -1002 2312 2246 862 175 11 0 chr17 53591324 53591501 -31846979 + CT-rich Low_complexity Low_complexity 2 180 0 221 147 0 0 chr17 53591501 53591535 -31846945 + (TTC)n Simple_repeat Simple_repeat 3 36 0 850 204 0 6 chr17 53593378 53593540 -31844940 - FRAM SINE Alu -11 165 5 198 333 12 24 chr17 53593816 53593900 -31844580 + L2 LINE L2 3180 3262 -10 21 36 0 0 chr17 53594178 53594206 -31844274 + AT_rich Low_complexity Low_complexity 1 28 0 255 323 30 0 chr17 53595614 53595713 -31842767 + L2 LINE L2 3212 3313 0 272 293 60 53 chr17 53596622 53596681 -31841799 - L2 LINE L2 -5 3308 3251 1933 179 15 9 chr17 53596681 53597022 -31841458 + MER61A LTR ERV1 1 343 0 272 293 60 53 chr17 53597022 53597095 -31841385 - L2 LINE L2 -62 3251 3175 267 222 0 14 chr17 53597488 53597560 -31840920 + A-rich Low_complexity Low_complexity 3 73 0 34 42 0 0 chr17 53598443 53598491 -31839989 + AT_rich Low_complexity Low_complexity 1 48 0 2080 135 0 0 chr17 53598861 53599158 -31839322 + AluSx SINE Alu 1 297 -15 1267 76 0 0 chr17 53600093 53600250 -31838230 + AluY SINE Alu 139 295 -16 261 338 76 28 chr17 53600539 53600684 -31837796 - MIR SINE MIR -64 198 47 2323 118 14 0 chr17 53601674 53602031 -31836449 - L1PB1 LINE L1 -4 6147 5786 353 284 0 0 chr17 53602036 53602124 -31836356 - L1MC4 LINE L1 -1341 6701 6614 303 214 0 14 chr17 53602095 53602165 -31836315 - L1MCa LINE L1 -4362 2064 1996 * 3290 157 53 4 chr17 53602169 53603127 -31835353 - L1P5 LINE L1 -360 5791 4789 232 300 0 22 chr17 53603251 53603266 -31835214 + GA-rich Low_complexity Low_complexity 3 17 -73 2206 196 19 14 chr17 53603266 53603690 -31834790 - MSTB LTR MaLR 0 426 1 232 300 0 22 chr17 53603690 53603764 -31834716 + GA-rich Low_complexity Low_complexity 17 90 0 18863 172 65 16 chr17 53605475 53608481 -31829999 + L1MA1 LINE L1 12 2869 -4852 2233 148 13 5 chr17 53608481 53608853 -31829627 - THE1C LTR MaLR 0 375 1 18863 172 65 16 chr17 53608853 53613073 -31825407 + L1MA1 LINE L1 2869 7611 -110 814 281 23 5 chr17 53613374 53613591 -31824889 + MER58A DNA MER1_type 4 224 0 591 253 95 37 chr17 53613609 53613799 -31824681 + MIR SINE MIR 37 237 -25 242 284 101 37 chr17 53614229 53614338 -31824142 - LTR50 LTR ERVL -322 473 358 228 323 100 15 chr17 53615282 53615412 -31823068 + L2 LINE L2 3148 3288 -25 240 35 0 0 chr17 53615519 53615548 -31822932 + (CAA)n Simple_repeat Simple_repeat 2 30 0 235 315 92 15 chr17 53616096 53616226 -31822254 - MIR SINE MIR -26 236 97 233 216 87 0 chr17 53616236 53616315 -31822165 - MLT1G1 LTR MaLR -3 590 460 238 308 31 15 chr17 53616638 53616703 -31821777 - MIR SINE MIR -176 86 21 405 58 0 0 chr17 53617059 53617111 -31821369 + (CA)n Simple_repeat Simple_repeat 2 53 0 2609 108 3 13 chr17 53617111 53617490 -31820990 - THE1C LTR MaLR 0 375 1 235 327 19 10 chr17 53617630 53617734 -31820746 - MLT1J2 LTR MaLR -246 204 100 293 243 184 0 chr17 53619059 53619162 -31819318 - L1MA10 LINE L1 -9 6325 6204 1556 119 0 0 chr17 53619166 53619376 -31819104 + AluSc SINE Alu 1 210 -99 1983 255 84 6 chr17 53619390 53620045 -31818435 - L1ME1 LINE L1 -108 6058 5354 1455 58 0 16 chr17 53622123 53622333 -31816147 - AluY SINE Alu 0 311 111 28 48 0 0 chr17 53622420 53622462 -31816018 + AT_rich Low_complexity Low_complexity 1 42 0 405 329 74 4 chr17 53622859 53623073 -31815407 + MIR SINE MIR 5 227 -35 267 312 11 11 chr17 53623150 53623243 -31815237 - MIR3 SINE MIR -15 193 101 733 315 36 0 chr17 53623398 53623620 -31814860 + MIR SINE MIR 33 262 0 1656 95 4 4 chr17 53624292 53624535 -31813945 + L1PA10 LINE L1 5926 6168 0 193 54 0 54 chr17 53624624 53624661 -31813819 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 282 288 0 0 chr17 53624745 53624818 -31813662 + (TATATG)n Simple_repeat Simple_repeat 4 76 0 26 0 0 0 chr17 53625994 53626020 -31812460 + AT_rich Low_complexity Low_complexity 1 26 0 188 364 0 0 chr17 53626385 53626440 -31812040 - MER5A DNA MER1_type -1 188 134 2531 104 6 3 chr17 53627109 53627463 -31811017 - THE1A LTR MaLR 0 355 1 5495 121 10 4 chr17 53627463 53628270 -31810210 - THE1A-int LTR MaLR 0 1580 769 2531 104 6 3 chr17 53629162 53629516 -31808964 - THE1A LTR MaLR 0 355 1 10831 121 5 2 chr17 53629516 53631091 -31807389 - THE1A-int LTR MaLR 0 1580 1 2628 86 14 3 chr17 53631091 53631442 -31807038 - THE1A LTR MaLR 0 355 1 1687 265 86 25 chr17 53632319 53633052 -31805428 - L1ME2 LINE L1 -1 6163 5386 466 241 82 50 chr17 53633038 53633258 -31805222 - L1ME2 LINE L1 -329 5835 5609 * 700 316 25 6 chr17 53633253 53633576 -31804904 - L1MCc LINE L1 -4951 1472 1144 320 279 180 22 chr17 53633983 53634205 -31804275 + L1ME4a LINE L1 5708 5964 -157 1195 47 26 21 chr17 53635912 53636144 -31802336 + (TTTC)n Simple_repeat Simple_repeat 1 233 0 343 203 14 14 chr17 53636317 53636386 -31802094 + MLT1E LTR MaLR 1 69 -473 1445 222 110 36 chr17 53636390 53636809 -31801671 - LTR40a LTR ERVL 0 519 70 768 256 140 30 chr17 53636835 53637272 -31801208 + MLT1E LTR MaLR 67 593 0 2279 87 0 10 chr17 53637823 53638122 -31800358 + AluSc SINE Alu 1 296 -13 7837 164 38 29 chr17 53638507 53641358 -31797122 - L1MA3 LINE L1 0 7724 4846 * 13951 160 25 33 chr17 53641355 53641915 -31796565 - L1MA3 LINE L1 -3559 4006 3443 207 0 0 0 chr17 53641915 53641938 -31796542 + (TG)n Simple_repeat Simple_repeat 2 24 0 13951 160 25 33 chr17 53641938 53642019 -31796461 - L1MA3 LINE L1 -4122 3443 3363 1975 101 4 11 chr17 53642019 53642275 -31796205 + AluSp SINE Alu 27 304 -9 235 0 0 0 chr17 53642275 53642301 -31796179 + (CAAAA)n Simple_repeat Simple_repeat 3 75 0 13951 160 25 33 chr17 53642311 53644589 -31793891 - L1MA3 LINE L1 -4202 3363 1099 523 200 24 16 chr17 53644575 53644700 -31793780 - L1MA3 LINE L1 -7421 144 19 * 291 293 52 19 chr17 53644746 53644958 -31793522 - L1ME LINE L1 -301 5820 5602 255 167 37 0 chr17 53645084 53645138 -31793342 - L1ME LINE L1 -687 5434 5379 26 30 0 0 chr17 53645287 53645320 -31793160 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr17 53645469 53645499 -31792981 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17 53645776 53645797 -31792683 + AT_rich Low_complexity Low_complexity 1 21 0 772 304 116 42 chr17 53646107 53646557 -31791923 + L2 LINE L2 2494 2976 -338 784 206 21 44 chr17 53646699 53647028 -31791452 + MLT1D LTR MaLR 141 505 0 326 287 117 42 chr17 53647031 53647296 -31791184 + L2 LINE L2 3021 3305 -8 363 183 54 32 chr17 53648699 53648792 -31789688 + MLT1B LTR MaLR 245 339 -51 949 129 0 7 chr17 53648853 53649000 -31789480 - AluSg/x SINE Alu -3 309 164 226 294 98 0 chr17 53649199 53649291 -31789189 - L1M4 LINE L1 -1308 4838 4738 332 325 154 5 chr17 53649723 53649911 -31788569 + L1 LINE L1 3671 3886 -2260 184 346 90 52 chr17 53650433 53650644 -31787836 - MIR SINE MIR -30 232 14 750 176 33 13 chr17 53651475 53651628 -31786852 - L1MA3 LINE L1 -10 6295 6140 1330 175 17 44 chr17 53651642 53651939 -31786541 - L1PB4 LINE L1 -12 6144 5856 410 143 98 62 chr17 53651946 53652058 -31786422 - L1PB4 LINE L1 -264 5892 5777 314 195 0 9 chr17 53652181 53652294 -31786186 + (TA)n Simple_repeat Simple_repeat 2 113 0 3179 163 35 1 chr17 53652300 53653370 -31785110 - L1PB4 LINE L1 -368 5788 4682 428 254 67 0 chr17 53653369 53653503 -31784977 - L1MA4A LINE L1 -155 6148 6006 * 346 307 101 41 chr17 53653506 53653788 -31784692 - L1M4 LINE L1 -814 5332 5024 198 0 0 0 chr17 53653788 53653810 -31784670 + (TG)n Simple_repeat Simple_repeat 1 22 0 346 307 101 41 chr17 53653810 53653872 -31784608 - L1M4 LINE L1 -1122 5024 4967 23 33 0 0 chr17 53654059 53654089 -31784391 + AT_rich Low_complexity Low_complexity 1 30 0 29 94 0 0 chr17 53654558 53654643 -31783837 + AT_rich Low_complexity Low_complexity 1 85 0 28 61 0 0 chr17 53654674 53654723 -31783757 + AT_rich Low_complexity Low_complexity 1 49 0 1121 267 66 59 chr17 53654946 53655640 -31782840 + L1ME3A LINE L1 5463 6161 -9 594 118 0 0 chr17 53655884 53655996 -31782484 + AluSg/x SINE Alu 198 309 0 9179 196 80 10 chr17 53656422 53658230 -31780250 + L1PA15-16 LINE L1 1 1934 -4915 866 135 0 0 chr17 53658232 53658358 -31780122 - AluSg/x SINE Alu -6 306 181 1192 90 0 26 chr17 53658359 53658548 -31779932 + L1PA15-16 LINE L1 2737 2920 -3929 824 233 49 38 chr17 53658546 53658834 -31779646 + L1 LINE L1 3229 3519 -3330 * 437 97 0 0 chr17 53658834 53658896 -31779584 - THE1C LTR MaLR -313 62 1 9329 146 44 5 chr17 53658902 53660417 -31778063 - THE1C-int LTR MaLR -6 1574 1 2454 138 3 5 chr17 53660417 53660793 -31777687 - THE1C LTR MaLR 0 375 1 1511 211 0 44 chr17 53660796 53661185 -31777295 + L1 LINE L1 4046 4417 -1729 533 220 10 0 chr17 53661185 53661285 -31777195 + LTR46 LTR ERV1 1 101 -359 344 245 108 0 chr17 53661376 53661515 -31776965 + LTR46 LTR ERV1 276 429 -31 5005 195 28 11 chr17 53661529 53663260 -31775220 + L1PA16 LINE L1 4409 6161 -5 305 287 90 75 chr17 53663325 53663883 -31774597 + HAL1 LINE L1 1138 1703 -804 411 375 52 9 chr17 53664163 53664582 -31773898 + L1MC/D LINE L1 5383 5819 -1989 194 79 0 53 chr17 53664931 53664969 -31773511 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 2251 82 4 0 chr17 53665146 53665426 -31773054 - AluSc SINE Alu -28 281 1 480 256 60 75 chr17 53665473 53665672 -31772808 + L2 LINE L2 3118 3313 0 22 56 0 0 chr17 53666453 53666489 -31771991 + AT_rich Low_complexity Low_complexity 1 36 0 2302 139 8 14 chr17 53666674 53667040 -31771440 + THE1B LTR MaLR 1 364 0 22 35 0 0 chr17 53667302 53667331 -31771149 + AT_rich Low_complexity Low_complexity 1 29 0 580 280 6 34 chr17 53667334 53667509 -31770971 + L1MA4 LINE L1 1357 1526 -5970 2181 246 56 68 chr17 53667514 53668960 -31769520 + L1MA4 LINE L1 2209 3402 -4229 1363 174 82 4 chr17 53668960 53669230 -31769250 + AluSx SINE Alu 1 291 -21 2181 246 56 68 chr17 53669230 53669565 -31768915 + L1MA4 LINE L1 3402 3740 -3891 * 7810 194 78 25 chr17 53669563 53671993 -31766487 + L1MA4 LINE L1 4659 7208 -511 2571 105 0 36 chr17 53672083 53672248 -31766232 + THE1C LTR MaLR 1 170 -205 2171 189 51 16 chr17 53672248 53672736 -31765744 + LTR22 LTR ERVK 1 505 -4 2571 105 0 36 chr17 53672736 53672959 -31765521 + THE1C LTR MaLR 170 375 0 9273 118 38 51 chr17 53672959 53673331 -31765149 + THE1C-int LTR MaLR 1 376 -1204 1828 163 3 3 chr17 53673331 53673638 -31764842 - AluSx SINE Alu -5 307 1 9273 118 38 51 chr17 53673638 53674860 -31763620 + THE1C-int LTR MaLR 376 1574 -6 2231 121 16 29 chr17 53674865 53675244 -31763236 + THE1C LTR MaLR 1 374 -1 527 130 10 0 chr17 53675248 53675348 -31763132 + (CA)n Simple_repeat Simple_repeat 2 102 0 1266 147 55 0 chr17 53675362 53675580 -31762900 + MER30 DNA MER1_type 1 230 0 279 0 0 0 chr17 53675584 53675615 -31762865 + (CA)n Simple_repeat Simple_repeat 2 32 0 1688 226 42 9 chr17 53675638 53676099 -31762381 + L1MA4 LINE L1 7242 7707 -12 520 287 73 45 chr17 53676117 53676755 -31761725 + L1MEd LINE L1 663 1272 -4857 348 318 92 26 chr17 53676878 53677073 -31761407 - L2 LINE L2 -337 2977 2770 475 343 66 12 chr17 53677252 53677494 -31760986 - MLT1J1 LTR MaLR -149 297 43 471 241 226 7 chr17 53677915 53678052 -31760428 + MER5A DNA MER1_type 16 182 -7 23 54 0 0 chr17 53678442 53678479 -31760001 + AT_rich Low_complexity Low_complexity 1 37 0 1272 160 42 8 chr17 53679043 53679280 -31759200 + L1PB4 LINE L1 5909 6153 -3 223 289 144 0 chr17 53679314 53679411 -31759069 - MIR SINE MIR -64 198 88 402 278 51 40 chr17 53680317 53680493 -31757987 + MER5B DNA MER1_type 1 178 0 1494 123 0 0 chr17 53680657 53680860 -31757620 - AluSg SINE Alu -107 203 1 346 274 19 28 chr17 53681021 53681127 -31757353 + MER5A DNA MER1_type 77 181 -8 474 65 0 0 chr17 53681217 53681279 -31757201 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 21 0 0 0 chr17 53682071 53682092 -31756388 + AT_rich Low_complexity Low_complexity 1 21 0 338 225 16 23 chr17 53682548 53682677 -31755803 + GA-rich Low_complexity Low_complexity 3 130 0 373 286 27 43 chr17 53683391 53683576 -31754904 + MER104 DNA Tc2 1 177 -3 1581 209 7 0 chr17 53684324 53684630 -31753850 - AluJb SINE Alu -2 310 3 8923 184 36 15 chr17 53684651 53687392 -31751088 - L1PA13 LINE L1 -6 6157 3373 25 31 0 0 chr17 53687578 53687610 -31750870 + AT_rich Low_complexity Low_complexity 1 32 0 565 220 122 9 chr17 53687945 53688159 -31750321 - Charlie1 DNA MER1_type -2 2759 2522 197 314 108 20 chr17 53689291 53689393 -31749087 + L2 LINE L2 3140 3250 -22 453 293 128 35 chr17 53691376 53691666 -31746814 + MER20B DNA MER1_type 31 347 -436 47 67 0 0 chr17 53691774 53691863 -31746617 + AT_rich Low_complexity Low_complexity 1 89 0 987 153 6 17 chr17 53692447 53692624 -31745856 + Tigger7 DNA MER2_type 2413 2587 0 239 317 81 32 chr17 53692846 53692969 -31745511 + MER5B DNA MER1_type 50 178 0 255 362 39 68 chr17 53693243 53693828 -31744652 - L2 LINE L2 -1020 2294 1727 340 315 148 12 chr17 53694223 53694385 -31744095 + MER5A DNA MER1_type 4 187 -2 219 325 26 13 chr17 53694443 53694520 -31743960 - MER5A DNA MER1_type -48 141 64 28 48 0 0 chr17 53695591 53695633 -31742847 + AT_rich Low_complexity Low_complexity 1 42 0 532 335 194 29 chr17 53695771 53696305 -31742175 - L2 LINE L2 -2159 1155 466 2219 178 68 5 chr17 53696305 53696744 -31741736 + LTR24 LTR ERV1 1 467 0 532 335 194 29 chr17 53696744 53696941 -31741539 - L2 LINE L2 -2848 466 303 1738 195 40 34 chr17 53696960 53697340 -31741140 + MLT1B LTR MaLR 1 382 -8 1690 211 72 10 chr17 53697534 53697994 -31740486 + MER110A LTR ERV1 21 491 0 216 0 0 0 chr17 53698971 53698995 -31739485 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 225 282 88 46 chr17 53699457 53699719 -31738761 + L1ME2 LINE L1 1155 1427 -5520 238 232 73 0 chr17 53699731 53699813 -31738667 + L1ME2 LINE L1 1322 1409 -5450 615 233 114 5 chr17 53699881 53700083 -31738397 + L1ME2 LINE L1 5683 5906 -1051 293 248 50 0 chr17 53700093 53700194 -31738286 + L1ME2 LINE L1 5954 6059 -898 399 183 65 12 chr17 53700207 53700376 -31738104 + (TA)n Simple_repeat Simple_repeat 1 178 0 2113 261 41 26 chr17 53700429 53701286 -31737194 + L1ME2 LINE L1 6067 6937 -38 22 0 0 0 chr17 53701459 53701481 -31736999 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 53701535 53701563 -31736917 + AT_rich Low_complexity Low_complexity 1 28 0 241 239 227 11 chr17 53702007 53702095 -31736385 - L2 LINE L2 -1 3312 3206 201 294 143 0 chr17 53702457 53702576 -31735904 + L2 LINE L2 3105 3240 -73 191 381 24 0 chr17 53702633 53702717 -31735763 + MIR SINE MIR 60 145 -63 370 343 104 15 chr17 53704528 53704729 -31733751 - MIR SINE MIR -10 252 34 227 335 110 52 chr17 53705133 53705306 -31733174 + L3 LINE CR1 1389 1571 -6 671 295 43 30 chr17 53706010 53706312 -31732168 - L1ME3A LINE L1 -14 6156 5851 21 0 0 0 chr17 53706426 53706447 -31732033 + AT_rich Low_complexity Low_complexity 1 21 0 999 186 72 13 chr17 53706459 53706696 -31731784 + L1MA3 LINE L1 6032 6282 -23 984 264 94 24 chr17 53706735 53707201 -31731279 + L1ME LINE L1 4644 5142 -1004 277 135 11 45 chr17 53707219 53707308 -31731172 + GA-rich Low_complexity Low_complexity 2 87 0 2099 124 100 0 chr17 53707321 53707652 -31730828 + THE1B LTR MaLR 1 364 0 10652 114 3 27 chr17 53707652 53709271 -31729209 + THE1B-int LTR MaLR 1 1580 0 2528 128 0 0 chr17 53709275 53709635 -31728845 + THE1B LTR MaLR 5 364 0 402 268 95 14 chr17 53709657 53709938 -31728542 + L1ME LINE L1 5215 5514 -648 946 191 51 0 chr17 53710260 53710496 -31727984 - L1MA8 LINE L1 0 6291 6044 1229 152 53 33 chr17 53710496 53710739 -31727741 + L1MA8 LINE L1 5743 5990 -301 616 107 33 8 chr17 53711690 53711812 -31726668 + CT-rich Low_complexity Low_complexity 2 126 0 568 306 72 5 chr17 53714215 53714437 -31724043 + L2 LINE L2 2496 2732 -582 541 245 27 15 chr17 53714626 53714846 -31723634 + L1M4 LINE L1 5201 5422 -745 360 356 39 70 chr17 53715147 53715478 -31723002 - L2 LINE L2 -36 3236 2916 1540 177 59 129 chr17 53715662 53716205 -31722275 + MLT1D LTR MaLR 1 505 0 278 327 42 67 chr17 53716359 53716524 -31721956 + MIR SINE MIR 20 180 -82 189 400 15 31 chr17 53718498 53718628 -31719852 + MIR3 SINE MIR 31 158 -50 2185 94 7 3 chr17 53718924 53719221 -31719259 - AluSc SINE Alu -11 298 1 1522 201 26 0 chr17 53719979 53720248 -31718232 + L1PA12 LINE L1 6 281 -7300 5215 136 17 13 chr17 53720248 53721333 -31717147 + L1PA13 LINE L1 5059 6151 -12 1810 161 150 3 chr17 53721352 53721535 -31716945 + MSTA LTR MaLR 6 161 -267 228 35 0 0 chr17 53721535 53721564 -31716916 + (TC)n Simple_repeat Simple_repeat 1 29 0 1810 161 150 3 chr17 53721564 53721747 -31716733 + MSTA LTR MaLR 161 426 -2 200 336 70 14 chr17 53722495 53722638 -31715842 + L2 LINE L2 2206 2356 -958 2214 117 3 0 chr17 53722682 53722990 -31715490 - AluSx SINE Alu -3 309 1 1032 105 0 0 chr17 53722994 53723127 -31715353 - AluSq/x SINE Alu -180 133 1 244 318 83 93 chr17 53723139 53723538 -31714942 + L2 LINE L2 2404 2798 -516 261 395 56 5 chr17 53723624 53723819 -31714661 + L2 LINE L2 2875 3079 -193 451 150 60 80 chr17 53723896 53723996 -31714484 - MER63 DNA MER1_type -87 749 26 435 298 65 20 chr17 53724260 53724505 -31713975 + MER41B LTR ERV1 175 430 -205 31 26 0 0 chr17 53725618 53725656 -31712824 + AT_rich Low_complexity Low_complexity 1 38 0 234 70 0 88 chr17 53725810 53725867 -31712613 + (TTTTTA)n Simple_repeat Simple_repeat 2 53 0 7327 173 22 18 chr17 53725875 53727513 -31710967 - L1PB1 LINE L1 -5 6146 4496 2136 106 7 0 chr17 53727513 53727805 -31710675 - AluY SINE Alu -17 294 1 7327 173 22 18 chr17 53727805 53728691 -31709789 - L1PB1 LINE L1 -1655 4496 3615 673 210 62 25 chr17 53728912 53729074 -31709406 + MLT2B2 LTR ERVL 312 479 -36 222 129 0 43 chr17 53729085 53729155 -31709325 + (TA)n Simple_repeat Simple_repeat 1 67 0 304 88 41 0 chr17 53729208 53729262 -31709218 + MLT2D LTR ERVL 364 413 -1 451 293 131 46 chr17 53730073 53730424 -31708056 - MLT1K LTR MaLR -3 585 205 423 153 7 51 chr17 53730605 53730742 -31707738 + GA-rich Low_complexity Low_complexity 2 132 0 227 296 92 20 chr17 53730938 53731036 -31707444 + MIR SINE MIR 86 190 -72 22 35 0 0 chr17 53731406 53731435 -31707045 + AT_rich Low_complexity Low_complexity 1 29 0 200 141 0 94 chr17 53731468 53731532 -31706948 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 21 89 0 0 chr17 53732301 53732357 -31706123 + AT_rich Low_complexity Low_complexity 1 56 0 307 324 138 22 chr17 53732573 53732798 -31705682 + MIR SINE MIR 6 256 -6 272 180 0 0 chr17 53732934 53732984 -31705496 - MLT2B1 LTR ERVL -2 518 469 408 180 24 12 chr17 53733045 53733159 -31705321 - MLT2B2 LTR ERVL -298 116 1 24 53 0 0 chr17 53733492 53733530 -31704950 + AT_rich Low_complexity Low_complexity 1 38 0 275 333 38 49 chr17 53733583 53733850 -31704630 - HAL1 LINE L1 -490 2017 1754 272 249 155 82 chr17 53733927 53734417 -31704063 - HAL1 LINE L1 -892 1615 1090 653 167 25 25 chr17 53734432 53734552 -31703928 - FLAM_C SINE Alu -12 131 12 577 281 21 16 chr17 53734572 53734764 -31703716 - L1ME1 LINE L1 -5 6161 5969 * 1389 248 59 14 chr17 53734752 53735312 -31703168 + L1MD1 LINE L1 2810 3394 -2752 * 3573 174 36 92 chr17 53735309 53736310 -31702170 + L1MD1 LINE L1 5298 6242 0 218 378 20 0 chr17 53737720 53737818 -31700662 - MIR3 SINE MIR -10 198 99 2678 161 188 51 chr17 53738180 53738909 -31699571 + Tigger3b DNA MER2_type 1 829 -402 26 30 0 0 chr17 53739108 53739141 -31699339 + AT_rich Low_complexity Low_complexity 1 33 0 2090 105 30 0 chr17 53740097 53740392 -31698088 - AluSx SINE Alu -8 304 1 52 50 0 0 chr17 53740809 53740889 -31697591 + AT_rich Low_complexity Low_complexity 1 80 0 1788 208 42 2 chr17 53740937 53741345 -31697135 - L1 LINE L1 -2382 3764 3341 4805 165 35 47 chr17 53741346 53743140 -31695340 + L1MA6 LINE L1 4534 6296 -4 21 0 0 0 chr17 53746146 53746167 -31692313 + AT_rich Low_complexity Low_complexity 1 21 0 22 88 0 0 chr17 53747269 53747326 -31691154 + AT_rich Low_complexity Low_complexity 1 57 0 575 244 195 13 chr17 53749686 53749767 -31688713 + LTR37A LTR ERV1 41 106 -320 2427 70 0 3 chr17 53749767 53750068 -31688412 + AluY SINE Alu 1 300 -11 575 244 195 13 chr17 53750068 53750176 -31688304 + LTR37A LTR ERV1 106 193 -233 213 65 0 0 chr17 53750176 53750207 -31688273 + (TG)n Simple_repeat Simple_repeat 2 32 0 575 244 195 13 chr17 53750207 53750324 -31688156 + LTR37A LTR ERV1 193 404 -22 627 115 0 0 chr17 53750597 53750684 -31687796 - FLAM_A SINE Alu -20 122 36 334 381 43 9 chr17 53750686 53750917 -31687563 + MIR SINE MIR 13 251 -11 259 294 24 0 chr17 53751230 53751315 -31687165 - MIR SINE MIR -97 165 79 325 228 139 0 chr17 53753667 53753768 -31684712 - LTR33 LTR ERVL -3 518 404 279 291 6 31 chr17 53753861 53754029 -31684451 - LTR33 LTR ERVL -271 250 46 193 341 98 24 chr17 53754049 53754172 -31684308 + L2 LINE L2 3137 3268 -4 244 258 16 0 chr17 53754952 53755014 -31683466 + MIR SINE MIR 82 144 -118 1068 314 79 7 chr17 53755196 53755651 -31682829 - L1MEc LINE L1 -5879 517 30 383 346 56 12 chr17 53756115 53756456 -31682024 + L1MEc LINE L1 636 991 -5405 41 36 0 0 chr17 53756489 53756544 -31681936 + AT_rich Low_complexity Low_complexity 1 55 0 235 238 0 79 chr17 53756544 53756607 -31681873 + L2 LINE L2 3251 3308 -5 541 335 140 12 chr17 53756869 53757191 -31681289 - L2 LINE L2 -1 3312 2950 410 312 179 3 chr17 53757245 53757574 -31680906 - LTR50 LTR ERVL -2 793 326 956 199 12 0 chr17 53757867 53758038 -31680442 + MER2 DNA MER2_type 1 173 -172 259 246 16 0 chr17 53758138 53758199 -31680281 + MER2 DNA MER2_type 280 341 -4 1821 335 97 41 chr17 53758199 53759760 -31678720 - L2 LINE L2 -503 2811 1164 796 341 96 19 chr17 53759843 53760643 -31677837 + L2 LINE L2 2432 3288 -25 349 268 24 73 chr17 53760814 53760937 -31677543 + L2 LINE L2 3197 3313 0 1842 186 93 32 chr17 53761591 53762053 -31676427 + LTR2B LTR ERV1 1 490 0 215 305 19 76 chr17 53762559 53762664 -31675816 + MER5A DNA MER1_type 61 159 -30 24 85 0 0 chr17 53762689 53762748 -31675732 + AT_rich Low_complexity Low_complexity 1 59 0 2344 98 0 0 chr17 53762749 53763054 -31675426 + AluSc SINE Alu 1 305 -4 215 203 17 0 chr17 53763522 53763581 -31674899 + (TA)n Simple_repeat Simple_repeat 1 60 0 5106 211 57 73 chr17 53763589 53765508 -31672972 - L1MC2 LINE L1 -14 6330 4472 5778 109 18 0 chr17 53766038 53766931 -31671549 - L1PA13 LINE L1 -16 6147 5234 1181 158 15 20 chr17 53766967 53767170 -31671310 - MER49 LTR ERV1 -717 206 5 2155 169 3 3 chr17 53768034 53768396 -31670084 - THE1B LTR MaLR -2 362 1 1543 80 5 0 chr17 53769183 53769395 -31669085 + L1PA7 LINE L1 5939 6151 -3 183 42 0 0 chr17 53769496 53769520 -31668960 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 531 0 0 0 chr17 53769911 53769970 -31668510 + (TTATG)n Simple_repeat Simple_repeat 2 60 0 734 116 9 0 chr17 53769970 53770082 -31668398 - AluSg/x SINE Alu -24 288 176 271 342 18 9 chr17 53771454 53771565 -31666915 - MIR SINE MIR -16 246 135 24 0 0 0 chr17 53771747 53771771 -31666709 + AT_rich Low_complexity Low_complexity 1 24 0 2319 78 3 0 chr17 53771956 53772265 -31666215 - AluY SINE Alu -1 310 1 635 316 88 11 chr17 53772270 53772819 -31665661 - L1MEc LINE L1 -3270 2945 2343 2591 55 0 0 chr17 53772819 53773129 -31665351 - AluY SINE Alu -1 310 1 635 316 88 11 chr17 53773129 53773192 -31665288 - L1MEc LINE L1 -3872 2343 2286 323 344 53 16 chr17 53773218 53773407 -31665073 - L1MEc LINE L1 -4107 2289 2094 348 345 43 39 chr17 53773724 53773982 -31664498 - L2 LINE L2 -19 3294 3036 398 345 38 34 chr17 53774063 53774301 -31664179 + MLT1J1 LTR MaLR 204 442 -4 251 431 35 9 chr17 53774312 53774544 -31663936 - L2 LINE L2 -528 2786 2549 1000 208 12 45 chr17 53774907 53775196 -31663284 - L1ME LINE L1 -654 5512 5225 1801 204 3 3 chr17 53775202 53775541 -31662939 + MER2 DNA MER2_type 7 345 0 1849 267 58 50 chr17 53775638 53776365 -31662115 + L1ME1 LINE L1 5415 6147 -19 22 0 0 0 chr17 53776648 53776670 -31661810 + AT_rich Low_complexity Low_complexity 1 22 0 234 295 93 58 chr17 53777057 53777196 -31661284 + L2 LINE L2 3168 3311 -2 436 343 40 32 chr17 53779325 53779573 -31658907 + MIR SINE MIR 13 262 0 288 297 9 27 chr17 53780646 53780757 -31657723 + MIR SINE MIR 128 236 -26 304 349 19 0 chr17 53780955 53781061 -31657419 - MIR SINE MIR -112 150 43 626 101 0 0 chr17 53781330 53781419 -31657061 + AluY SINE Alu 206 294 -17 24 0 0 0 chr17 53782496 53782520 -31655960 + AT_rich Low_complexity Low_complexity 1 24 0 24 67 0 0 chr17 53784682 53784727 -31653753 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr17 53785431 53785456 -31653024 + AT_rich Low_complexity Low_complexity 1 25 0 14738 161 18 36 chr17 53785457 53788213 -31650267 + Tigger2 DNA MER2_type 3 2707 -11 24 53 0 0 chr17 53788781 53788819 -31649661 + AT_rich Low_complexity Low_complexity 1 38 0 30 0 0 0 chr17 53788878 53788908 -31649572 + AT_rich Low_complexity Low_complexity 1 30 0 14202 195 31 12 chr17 53790166 53795123 -31643357 - L1PB1 LINE L1 0 6867 1795 2010 121 0 0 chr17 53795123 53795430 -31643050 - AluSx SINE Alu 0 311 5 14202 195 31 12 chr17 53795430 53795843 -31642637 - L1PB1 LINE L1 -5072 1795 1392 284 200 14 0 chr17 53795840 53795910 -31642570 - L1PB1 LINE L1 -6666 197 127 * 184 288 0 34 chr17 53798968 53799027 -31639453 + MER5A DNA MER1_type 111 167 -22 21 36 0 0 chr17 53799408 53799436 -31639044 + AT_rich Low_complexity Low_complexity 1 28 0 187 275 0 0 chr17 53799621 53799661 -31638819 - L2 LINE L2 -47 3266 3227 1794 107 107 7 chr17 53799862 53800134 -31638346 + AluSx SINE Alu 1 299 -13 1904 149 3 3 chr17 53800614 53800903 -31637577 - AluSx SINE Alu -23 289 1 1775 140 59 51 chr17 53801453 53801663 -31636817 - THE1C LTR MaLR -1 374 158 2103 136 0 0 chr17 53801663 53801971 -31636509 + AluSx SINE Alu 3 310 -2 1775 140 59 51 chr17 53801971 53802131 -31636349 - THE1C LTR MaLR -217 158 1 897 230 5 5 chr17 53802483 53802670 -31635810 + MER5A DNA MER1_type 2 188 -1 24 53 0 0 chr17 53803154 53803192 -31635288 + AT_rich Low_complexity Low_complexity 1 38 0 530 378 55 5 chr17 53803817 53804034 -31634446 + MIR SINE MIR 15 242 -20 23 0 0 0 chr17 53805074 53805097 -31633383 + AT_rich Low_complexity Low_complexity 1 23 0 208 208 130 52 chr17 53805400 53805477 -31633003 - MIR SINE MIR -29 233 151 245 246 0 0 chr17 53805514 53805571 -31632909 - L1ME2 LINE L1 -44 6120 6064 416 237 206 89 chr17 53806227 53806543 -31631937 - LTR16A1 LTR ERVL 0 457 105 187 380 22 11 chr17 53806715 53806807 -31631673 - MIR SINE MIR -119 143 51 1877 221 106 18 chr17 53807055 53807489 -31630991 + L1PA13 LINE L1 1 472 -6315 350 304 30 0 chr17 53807488 53807623 -31630857 - L1MCa LINE L1 -1802 4762 4624 * 711 210 74 41 chr17 53807614 53807857 -31630623 - L1M4 LINE L1 -912 5652 5402 557 274 43 18 chr17 53807862 53808143 -31630337 - L1MCa LINE L1 -3012 3552 3265 3031 150 18 33 chr17 53808143 53808742 -31629738 - L1PA16 LINE L1 -3 6163 5574 1328 118 30 15 chr17 53808743 53809005 -31629475 + L1PA16 LINE L1 5281 5546 -620 1768 257 77 38 chr17 53809021 53809821 -31628659 - L1MCa LINE L1 -3316 3248 2481 1643 137 3 62 chr17 53809821 53810128 -31628352 - AluJb SINE Alu -20 292 4 1768 257 77 38 chr17 53810128 53810976 -31627504 - L1MCa LINE L1 -4083 2481 1396 398 145 12 48 chr17 53810989 53811072 -31627408 - MADE1 DNA Mariner 0 80 1 5095 136 18 8 chr17 53811196 53811685 -31626795 - L1MA5A LINE L1 -1 6296 5794 384 22 0 0 chr17 53811685 53811730 -31626750 + (TG)n Simple_repeat Simple_repeat 2 46 0 5095 136 18 8 chr17 53811730 53812099 -31626381 - L1MA5A LINE L1 -503 5794 5430 862 227 42 51 chr17 53812099 53812376 -31626104 - L1MCa LINE L1 -5794 358 3 231 36 0 0 chr17 53812956 53812984 -31625496 + (TC)n Simple_repeat Simple_repeat 1 28 0 504 275 14 52 chr17 53813376 53813614 -31624866 + L1ME1 LINE L1 5948 6334 0 602 304 122 27 chr17 53813646 53814135 -31624345 + L1ME3A LINE L1 5185 5719 -451 1318 271 17 8 chr17 53814172 53814523 -31623957 + MLT1A2 LTR MaLR 1 354 -20 1996 195 69 15 chr17 53814526 53814932 -31623548 - MSTA LTR MaLR 0 428 1 310 227 0 34 chr17 53814996 53815084 -31623396 + L1ME3A LINE L1 5841 5925 -245 1394 93 5 0 chr17 53815382 53815575 -31622905 + MLT2A2 LTR ERVL 1 194 -259 2397 79 0 3 chr17 53815577 53815882 -31622598 + AluSc SINE Alu 3 306 -3 250 248 50 28 chr17 53816955 53817041 -31621439 - MLT1D LTR MaLR -424 81 3 383 321 104 0 chr17 53817500 53817634 -31620846 - MIR SINE MIR -18 244 97 2079 199 6 31 chr17 53817646 53818163 -31620317 + L1PB1 LINE L1 4264 4767 -1379 3378 124 19 2 chr17 53818165 53818802 -31619678 + L1PB1 LINE L1 5141 5785 -366 1859 142 16 7 chr17 53818811 53819114 -31619366 + AluSp SINE Alu 4 309 -4 249 169 0 0 chr17 53819122 53819181 -31619299 + (TA)n Simple_repeat Simple_repeat 2 60 0 2207 143 3 8 chr17 53819187 53819558 -31618922 + L1PB1 LINE L1 5783 6151 0 6727 58 0 2 chr17 53819583 53820870 -31617610 - L1PA7 LINE L1 -1 6153 4866 505 172 0 0 chr17 53820871 53820958 -31617522 + L1PA7 LINE L1 4776 4862 -1284 299 343 59 0 chr17 53820958 53821060 -31617420 - MIR SINE MIR -153 109 2 1215 199 74 93 chr17 53821118 53821484 -31616996 + MLT1A1 LTR MaLR 1 359 -6 237 167 0 19 chr17 53821484 53821538 -31616942 - L2 LINE L2 -1019 2295 2243 514 242 28 71 chr17 53823492 53823674 -31614806 + MIR SINE MIR 72 245 -17 2061 106 67 3 chr17 53823751 53824082 -31614398 - L1PA13 LINE L1 -18 6145 5794 849 103 16 0 chr17 53824082 53824208 -31614272 + L1PA13 LINE L1 5674 5801 -367 1052 276 63 94 chr17 53825490 53826548 -31611932 - L1ME3A LINE L1 -31 6139 5119 302 200 0 17 chr17 53827340 53827400 -31611080 + Tigger5 DNA MER2_type 2265 2323 0 324 196 76 11 chr17 53827420 53827512 -31610968 - L1M4 LINE L1 -829 5317 5220 33 0 0 0 chr17 53827660 53827693 -31610787 + AT_rich Low_complexity Low_complexity 1 33 0 1958 74 7 4 chr17 53827693 53827964 -31610516 - L1PA8 LINE L1 -6 6166 5895 428 225 85 16 chr17 53828228 53828357 -31610123 + L1ME1 LINE L1 4788 4925 -1221 418 272 37 69 chr17 53828352 53828598 -31609882 + L1ME1 LINE L1 5326 5563 -603 * 1186 253 9 9 chr17 53828587 53828903 -31609577 + L1ME1 LINE L1 5800 6115 -51 2026 173 70 21 chr17 53828911 53829299 -31609181 - MSTA LTR MaLR -19 409 3 3783 187 41 45 chr17 53829322 53829545 -31608935 - L1M4 LINE L1 -1194 4952 4730 2979 185 27 25 chr17 53829545 53830260 -31608220 - L1MA8 LINE L1 -11 6280 5565 3783 187 41 45 chr17 53830260 53830962 -31607518 - L1M4 LINE L1 -1416 4730 4031 804 244 37 12 chr17 53830960 53831145 -31607335 + L1MA7 LINE L1 4943 5137 -1009 * 423 0 0 0 chr17 53831145 53831192 -31607288 + (CA)n Simple_repeat Simple_repeat 2 48 0 804 244 37 12 chr17 53831192 53831248 -31607232 + L1MA7 LINE L1 5137 5190 -956 786 208 0 33 chr17 53831248 53831311 -31607169 + AluJb SINE Alu 136 200 -112 1952 133 15 70 chr17 53831311 53831708 -31606772 - THE1C LTR MaLR 0 375 1 786 208 0 33 chr17 53831708 53831827 -31606653 + AluJb SINE Alu 200 312 0 321 163 47 23 chr17 53831827 53831913 -31606567 + L1MA7 LINE L1 5176 5263 -883 474 65 0 0 chr17 53831914 53831976 -31606504 + (TA)n Simple_repeat Simple_repeat 1 62 0 8103 192 20 25 chr17 53832013 53834417 -31604063 + L1MA4A LINE L1 3654 6054 -249 1689 128 4 0 chr17 53834429 53834687 -31603793 - L1PA16 LINE L1 -329 5837 5579 1260 124 5 16 chr17 53834687 53834881 -31603599 - THE1C LTR MaLR -149 226 35 1615 251 2 5 chr17 53834881 53835300 -31603180 - L1 LINE L1 -1604 4542 4125 * 3808 185 20 57 chr17 53835299 53835616 -31602864 + L1MA7 LINE L1 5335 5662 -629 2121 87 0 24 chr17 53835616 53835951 -31602529 + AluSc SINE Alu 1 328 0 3808 185 20 57 chr17 53835951 53836653 -31601827 + L1MA7 LINE L1 5662 6286 -5 26 30 0 0 chr17 53837035 53837068 -31601412 + AT_rich Low_complexity Low_complexity 1 33 0 29 28 0 0 chr17 53838174 53838210 -31600270 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr17 53838335 53838365 -31600115 + AT_rich Low_complexity Low_complexity 1 30 0 1470 212 119 6 chr17 53838737 53839082 -31599398 + MER89 LTR ERV1 176 559 0 239 404 56 19 chr17 53839147 53839471 -31599009 + L2 LINE L2 2636 2971 -343 276 364 95 24 chr17 53840434 53840687 -31597793 - L2 LINE L2 -967 2347 2077 511 320 52 81 chr17 53840954 53841580 -31596900 - L2 LINE L2 -71 3242 2648 8446 229 65 23 chr17 53841937 53842355 -31596125 + L1MC3 LINE L1 4533 4932 -2853 249 108 0 0 chr17 53842355 53842392 -31596088 + (CA)n Simple_repeat Simple_repeat 1 37 0 8446 229 65 23 chr17 53842392 53843305 -31595175 + L1MC3 LINE L1 4932 5805 -1980 1066 265 126 28 chr17 53843305 53843765 -31594715 - MLT1D LTR MaLR 0 505 1 8446 229 65 23 chr17 53843765 53845420 -31593060 + L1MC3 LINE L1 5805 7632 -153 328 271 136 13 chr17 53845797 53845952 -31592528 + MIR SINE MIR 89 262 0 1287 215 38 3 chr17 53846487 53846607 -31591873 + AluJo SINE Alu 1 115 -197 207 0 0 0 chr17 53846607 53846630 -31591850 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1287 215 38 3 chr17 53846630 53846802 -31591678 + AluJo SINE Alu 115 303 -9 1659 192 20 0 chr17 53848126 53848428 -31590052 + AluJb SINE Alu 2 309 -3 304 260 7 21 chr17 53848643 53848762 -31589718 + L1ME LINE L1 5338 5449 -672 252 86 0 0 chr17 53848894 53848929 -31589551 + (CA)n Simple_repeat Simple_repeat 2 36 0 259 234 13 0 chr17 53849632 53849709 -31588771 + L1ME LINE L1 981 1058 -5147 1411 220 36 56 chr17 53849803 53849872 -31588608 - MLT1B LTR MaLR -4 386 317 2287 98 0 6 chr17 53849872 53850187 -31588293 - AluSq SINE Alu 0 313 1 1411 220 36 56 chr17 53850187 53850508 -31587972 - MLT1B LTR MaLR -73 317 4 236 259 27 27 chr17 53850574 53850686 -31587794 + L1ME LINE L1 1049 1160 -5055 329 315 113 36 chr17 53850868 53851090 -31587390 + L1ME LINE L1 1580 1818 -4578 845 295 134 25 chr17 53851322 53851720 -31586760 + L1ME LINE L1 2179 2532 -3683 1747 130 68 20 chr17 53851720 53852012 -31586468 + AluSx SINE Alu 1 306 -6 845 295 134 25 chr17 53852012 53852505 -31585975 + L1ME LINE L1 2532 3167 -3048 7591 27 5 0 chr17 53852505 53853968 -31584512 + L1PA3 LINE L1 4689 6155 0 845 295 134 25 chr17 53853968 53854099 -31584381 + L1ME LINE L1 3167 3282 -2933 2522 54 0 16 chr17 53854210 53854525 -31583955 - AluY SINE Alu -1 310 1 242 313 45 0 chr17 53854525 53854637 -31583843 + L1ME3A LINE L1 6042 6158 -12 25 0 0 0 chr17 53854907 53854932 -31583548 + AT_rich Low_complexity Low_complexity 1 25 0 382 364 37 42 chr17 53856359 53856732 -31581748 - ERVL LTR ERVL -1743 3742 3370 249 33 0 0 chr17 53856732 53856762 -31581718 + (CAA)n Simple_repeat Simple_repeat 1 30 0 382 364 37 42 chr17 53856762 53856844 -31581636 - ERVL LTR ERVL -2115 3370 3289 351 370 66 19 chr17 53857013 53857270 -31581210 - ERVL LTR ERVL -1910 3086 2818 5482 169 69 20 chr17 53857282 53858433 -31580047 + Tigger3b DNA MER2_type 1 1207 -24 454 171 26 0 chr17 53858431 53858507 -31579973 - MSTB1 LTR MaLR -354 78 1 * 753 281 67 13 chr17 53858538 53858877 -31579603 - ERVL LTR ERVL -3005 2650 2301 1564 186 0 24 chr17 53858996 53859292 -31579188 - AluJo SINE Alu -13 299 11 22 0 0 0 chr17 53859910 53859932 -31578548 + AT_rich Low_complexity Low_complexity 1 22 0 686 308 67 9 chr17 53860910 53861225 -31577255 + L1ME LINE L1 320 652 -5418 304 274 110 44 chr17 53861312 53861630 -31576850 + L1ME LINE L1 764 1102 -4978 2833 154 31 4 chr17 53861693 53862207 -31576273 - L1MA4 LINE L1 -5 6295 5768 243 0 0 0 chr17 53862371 53862398 -31576082 + (TTG)n Simple_repeat Simple_repeat 1 27 0 294 289 21 63 chr17 53862526 53862668 -31575812 - MLT1I LTR MaLR -206 203 68 542 333 37 5 chr17 53862800 53863016 -31575464 + MER58A DNA MER1_type 1 223 -1 22 94 0 0 chr17 53863452 53863516 -31574964 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr17 53863646 53863667 -31574813 + AT_rich Low_complexity Low_complexity 1 21 0 14834 227 50 20 chr17 53864587 53869671 -31568809 + L1PA15 LINE L1 1 4928 -1888 1642 203 0 3 chr17 53869671 53869972 -31568508 - AluJb SINE Alu -12 300 1 14834 227 50 20 chr17 53869972 53871066 -31567414 + L1PA15 LINE L1 4928 6417 -399 2110 127 39 36 chr17 53871066 53871429 -31567051 + THE1B LTR MaLR 1 364 0 14834 227 50 20 chr17 53871429 53871826 -31566654 + L1PA15 LINE L1 6417 6800 -16 35 41 0 0 chr17 53871826 53871875 -31566605 + AT_rich Low_complexity Low_complexity 1 49 0 217 290 57 57 chr17 53871949 53872073 -31566407 - L2 LINE L2 -27 3286 3163 21 0 0 0 chr17 53872398 53872419 -31566061 + AT_rich Low_complexity Low_complexity 1 21 0 282 310 0 0 chr17 53873383 53873454 -31565026 - L2 LINE L2 -9 3263 3193 326 226 9 0 chr17 53873606 53873712 -31564768 + GA-rich Low_complexity Low_complexity 2 108 0 475 292 55 13 chr17 53873822 53874058 -31564422 - HAL1 LINE L1 -833 1674 1429 614 321 25 21 chr17 53874203 53874443 -31564037 + MIR SINE MIR 1 241 -21 497 256 47 38 chr17 53874484 53874695 -31563785 - HAL1 LINE L1 -1325 1182 970 2264 56 0 43 chr17 53874987 53875291 -31563189 - AluY SINE Alu -20 291 1 187 442 22 6 chr17 53875600 53875781 -31562699 - MIR3 SINE MIR -10 198 15 261 208 135 0 chr17 53876315 53876411 -31562069 - L1MC4 LINE L1 -1320 6722 6614 306 73 0 0 chr17 53877853 53877894 -31560586 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 378 289 102 53 chr17 53878208 53878644 -31559836 + L1ME4a LINE L1 5609 6121 0 3916 97 5 14 chr17 53878859 53879415 -31559065 + L1PA10 LINE L1 5609 6159 -9 1309 216 46 38 chr17 53879427 53879793 -31558687 - L1M4 LINE L1 -1929 4217 3849 38 39 0 0 chr17 53880543 53880595 -31557885 + AT_rich Low_complexity Low_complexity 1 52 0 2125 117 7 10 chr17 53880635 53880943 -31557537 - AluSx SINE Alu -5 307 1 240 318 20 12 chr17 53881035 53881132 -31557348 - MIR SINE MIR -92 117 19 644 272 68 5 chr17 53881325 53881531 -31556949 - MER20 DNA MER1_type 0 219 1 209 347 67 13 chr17 53882138 53882213 -31556267 + L2 LINE L2 3201 3279 -34 26 0 0 0 chr17 53883581 53883607 -31554873 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr17 53885406 53885428 -31553052 + AT_rich Low_complexity Low_complexity 1 22 0 307 264 23 0 chr17 53885453 53885540 -31552940 + MIR SINE MIR 126 214 -48 29 78 0 0 chr17 53885571 53885635 -31552845 + AT_rich Low_complexity Low_complexity 1 64 0 323 273 39 31 chr17 53885704 53885832 -31552648 - L2 LINE L2 -5 3308 3180 356 248 50 0 chr17 53885946 53886047 -31552433 - MER53 DNA DNA -83 106 1 373 323 74 49 chr17 53886054 53886384 -31552096 - L2 LINE L2 -221 3051 2700 342 311 28 9 chr17 53886884 53886990 -31551490 + MIR SINE MIR 43 150 -112 187 136 45 45 chr17 53887539 53887583 -31550897 + L2 LINE L2 3229 3272 0 208 171 24 0 chr17 53890214 53890255 -31548225 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 23 33 0 0 chr17 53891066 53891096 -31547384 + AT_rich Low_complexity Low_complexity 1 30 0 334 348 70 8 chr17 53891256 53891421 -31547059 - MIR SINE MIR -61 147 7 304 290 60 57 chr17 53892025 53892273 -31546207 + L1ME4a LINE L1 5858 6106 -15 282 219 19 67 chr17 53892938 53893043 -31545437 + LTR67 LTR ERVL 458 557 0 182 311 178 11 chr17 53893463 53893553 -31544927 - L2 LINE L2 -5 3308 3204 222 91 0 0 chr17 53893731 53893764 -31544716 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 244 303 40 10 chr17 53893843 53893942 -31544538 + L3 LINE CR1 650 751 -826 2200 136 50 21 chr17 53894025 53894443 -31544037 - L1PA16 LINE L1 0 6166 5737 2095 107 7 16 chr17 53894492 53894802 -31543678 + AluSx SINE Alu 1 307 -5 180 368 142 0 chr17 53895029 53895184 -31543296 + L3 LINE CR1 1103 1279 -298 209 373 49 35 chr17 53895569 53895711 -31542769 + L3 LINE CR1 1426 1569 -8 454 278 136 19 chr17 53895908 53896070 -31542410 + MIR SINE MIR 23 203 -59 327 109 16 16 chr17 53896094 53896158 -31542322 + L1MA1 LINE L1 6081 6144 -158 464 303 37 31 chr17 53896304 53896628 -31541852 - L1M4 LINE L1 -1743 4403 4078 595 303 133 22 chr17 53896646 53897455 -31541025 - L1M4 LINE L1 -2147 3999 3101 2188 98 7 3 chr17 53897523 53897819 -31540661 - AluSc SINE Alu -6 303 7 2689 7 0 0 chr17 53898191 53898485 -31539995 - AluYa5 SINE Alu -17 294 1 28 0 0 0 chr17 53898567 53898595 -31539885 + AT_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr17 53898778 53898813 -31539667 + AT_rich Low_complexity Low_complexity 1 35 0 444 309 89 44 chr17 53899194 53899690 -31538790 - L1MC/D LINE L1 -1987 5821 5304 323 286 11 11 chr17 53900881 53900989 -31537491 - MIR SINE MIR -64 144 37 202 259 19 0 chr17 53901094 53901202 -31537278 + (TA)n Simple_repeat Simple_repeat 1 110 0 533 56 0 0 chr17 53901266 53901337 -31537143 + L1PA3 LINE L1 6082 6152 -3 456 284 146 17 chr17 53903729 53904085 -31534395 + L1ME4a LINE L1 5484 5885 -236 315 212 106 95 chr17 53904101 53904290 -31534190 + L1ME4a LINE L1 5924 6114 -7 1004 185 165 28 chr17 53904514 53904763 -31533717 - L1MA6 LINE L1 -187 6113 5831 28 48 0 0 chr17 53905091 53905133 -31533347 + AT_rich Low_complexity Low_complexity 1 42 0 2143 81 10 3 chr17 53905190 53905497 -31532983 - L1MA1 LINE L1 -136 6166 5858 373 326 62 84 chr17 53905610 53906027 -31532453 + L1M2a LINE L1 4 411 -6757 508 286 68 28 chr17 53906128 53906376 -31532104 + L1M2a LINE L1 1842 2099 -5069 1375 192 14 21 chr17 53906378 53906806 -31531674 - L1MA6 LINE L1 -5 6295 5831 3539 259 64 26 chr17 53907169 53907711 -31530769 + L1MA9 LINE L1 1379 1899 -4949 2621 32 0 13 chr17 53907711 53908025 -31530455 + AluY SINE Alu 1 310 -1 3539 259 64 26 chr17 53908025 53909717 -31528763 + L1MA9 LINE L1 1899 3379 -3469 * 4172 228 22 57 chr17 53909708 53910944 -31527536 + L1MA9 LINE L1 3934 5212 -1802 269 243 9 0 chr17 53910944 53911012 -31527468 + Tigger2 DNA MER2_type 2 59 -2659 4172 228 22 57 chr17 53911012 53911046 -31527434 + L1MA9 LINE L1 5212 5246 -1768 710 254 13 12 chr17 53911046 53911208 -31527272 - MER8 DNA MER2_type -64 175 14 4172 228 22 57 chr17 53911208 53913070 -31525410 + L1MA9 LINE L1 5246 6976 -38 2367 302 48 36 chr17 53913196 53914053 -31524427 + L1PA15 LINE L1 7 873 -5914 644 205 7 13 chr17 53914087 53914238 -31524242 + L1PA15 LINE L1 3013 3162 -3635 * 4629 186 27 15 chr17 53914235 53914881 -31523599 + L1PA15 LINE L1 5418 6055 -761 1809 144 40 72 chr17 53914881 53915255 -31523225 - THE1B LTR MaLR -2 362 1 10322 117 7 33 chr17 53915255 53916876 -31521604 - THE1B-int LTR MaLR 0 1580 1 1900 163 36 30 chr17 53916876 53917238 -31521242 - THE1B LTR MaLR 0 364 1 4629 186 27 15 chr17 53917238 53917968 -31520512 + L1PA15 LINE L1 6054 6814 -2 5785 229 44 25 chr17 53917975 53919752 -31518728 + L1M2 LINE L1 3470 5280 -866 6907 58 5 3 chr17 53919752 53920887 -31517593 + L1PA6 LINE L1 5017 6152 -2 909 158 6 0 chr17 53920896 53921061 -31517419 + L1MA9 LINE L1 3676 3841 -2305 * 990 167 44 87 chr17 53921060 53921335 -31517145 + L1MA9 LINE L1 4511 4773 -1373 623 151 17 8 chr17 53921314 53921433 -31517047 + L1M2 LINE L1 5563 5682 -618 * 4690 57 0 10 chr17 53921433 53922046 -31516434 + L1PA8 LINE L1 5566 6172 0 204 111 0 0 chr17 53922060 53922096 -31516384 + (A)n Simple_repeat Simple_repeat 1 36 0 2380 166 43 0 chr17 53922155 53922595 -31515885 + L1M2 LINE L1 5318 5776 -536 765 202 15 45 chr17 53922596 53922794 -31515686 + L1MA9 LINE L1 4844 5035 -1111 1898 207 81 16 chr17 53922816 53923308 -31515172 + L1MA9 LINE L1 5787 6310 -2 25 31 0 0 chr17 53923584 53923616 -31514864 + AT_rich Low_complexity Low_complexity 1 32 0 296 340 105 31 chr17 53925160 53925322 -31513158 + MER5B DNA MER1_type 1 174 -4 3778 134 39 11 chr17 53926601 53927265 -31511215 - LTR1 LTR ERV1 -102 683 1 21 36 0 0 chr17 53927408 53927436 -31511044 + AT_rich Low_complexity Low_complexity 1 28 0 1159 274 85 29 chr17 53927565 53928117 -31510363 - HAL1 LINE L1 -620 1887 1305 314 291 108 31 chr17 53928156 53928379 -31510101 - HAL1 LINE L1 -1287 1220 981 270 381 22 0 chr17 53928394 53928533 -31509947 - MIR SINE MIR -2 260 119 253 223 0 43 chr17 53928546 53928640 -31509840 - HAL1 LINE L1 -359 2148 2059 33 43 0 0 chr17 53928734 53928781 -31509699 + AT_rich Low_complexity Low_complexity 1 47 0 312 27 0 0 chr17 53928944 53928981 -31509499 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 693 241 43 0 chr17 53928989 53929130 -31509350 - FRAM SINE Alu -35 141 1 261 329 73 24 chr17 53929194 53929358 -31509122 + MIR SINE MIR 88 259 -3 224 303 59 53 chr17 53929804 53929956 -31508524 + L2 LINE L2 3158 3310 -3 29 28 0 0 chr17 53930513 53930549 -31507931 + AT_rich Low_complexity Low_complexity 1 36 0 5815 221 37 13 chr17 53930551 53933290 -31505190 + L1MC1 LINE L1 3522 6333 0 227 31 31 0 chr17 53933368 53933400 -31505080 + (GA)n Simple_repeat Simple_repeat 2 34 0 237 33 0 0 chr17 53934067 53934097 -31504383 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 62 0 0 chr17 53934097 53934129 -31504351 + (GA)n Simple_repeat Simple_repeat 2 33 0 22 56 0 0 chr17 53935042 53935078 -31503402 + AT_rich Low_complexity Low_complexity 1 36 0 613 294 59 57 chr17 53935251 53935777 -31502703 + L1MEd LINE L1 1080 1697 -793 312 295 25 16 chr17 53938173 53938295 -31500185 + MIR SINE MIR 67 189 -73 255 248 62 0 chr17 53938326 53938487 -31499993 + (TTATA)n Simple_repeat Simple_repeat 1 171 0 83 88 0 0 chr17 53938504 53938720 -31499760 + AT_rich Low_complexity Low_complexity 1 216 0 1825 264 38 0 chr17 53938720 53939163 -31499317 + MER74C LTR ERVL 1 460 0 308 284 0 0 chr17 53940868 53940942 -31497538 + L2 LINE L2 3199 3272 0 984 276 33 95 chr17 53941806 53942259 -31496221 - MLT1E2 LTR MaLR -8 618 73 29 0 0 0 chr17 53942646 53942675 -31495805 + AT_rich Low_complexity Low_complexity 1 29 0 292 181 44 0 chr17 53943350 53943436 -31495044 + L1MB4 LINE L1 6079 6179 -1 1023 219 61 45 chr17 53944108 53944419 -31494061 - L1MB8 LINE L1 -9 6169 5854 6401 185 36 29 chr17 53944425 53944772 -31493708 - L1PB4 LINE L1 0 6156 5813 324 0 0 0 chr17 53944772 53944808 -31493672 + (CA)n Simple_repeat Simple_repeat 2 37 0 6401 185 36 29 chr17 53944808 53946998 -31491482 - L1PB4 LINE L1 -343 5813 3611 4391 238 23 16 chr17 53947094 53948328 -31490152 + L1PA13 LINE L1 1224 2481 -4316 1865 208 19 64 chr17 53948328 53948810 -31489670 - LOR1a LTR ERV1 0 497 38 5946 249 37 13 chr17 53948825 53950633 -31487847 + L1PA13 LINE L1 2479 4330 -2467 9589 157 12 21 chr17 53950646 53952338 -31486142 + L1PA15 LINE L1 11 1687 -4459 4474 149 11 12 chr17 53952335 53953098 -31485382 + L1PA15 LINE L1 5401 6162 -3 * 22 35 0 0 chr17 53953740 53953769 -31484711 + AT_rich Low_complexity Low_complexity 1 29 0 2202 122 3 0 chr17 53954098 53954402 -31484078 + AluSq SINE Alu 1 305 -8 1035 280 54 85 chr17 53954839 53955393 -31483087 - L2 LINE L2 -522 2792 2256 1129 198 61 85 chr17 53955449 53955731 -31482749 - MER67C LTR ERV1 -8 506 218 2126 132 121 16 chr17 53955731 53956118 -31482362 + MSTA LTR MaLR 1 428 0 1129 198 61 85 chr17 53956118 53956282 -31482198 - MER67C LTR ERV1 -296 218 85 11669 22 2 4 chr17 53956282 53958433 -31480047 + L1PA5 LINE L1 4003 6154 0 1129 198 61 85 chr17 53958433 53958454 -31480026 - MER67C LTR ERV1 -429 85 65 268 283 0 65 chr17 53958500 53958592 -31479888 - MER67D LTR ERV1 -428 86 1 399 297 31 0 chr17 53958600 53958728 -31479752 + MER94 DNA DNA 1 132 -2 224 310 14 0 chr17 53959448 53959519 -31478961 - L2 LINE L2 0 3313 3242 440 218 23 0 chr17 53959986 53960073 -31478407 + Tigger7 DNA MER2_type 1 89 -616 829 106 18 0 chr17 53960074 53960187 -31478293 + AluSc SINE Alu 174 288 -21 2258 183 21 12 chr17 53960187 53960607 -31477873 + Tigger7 DNA MER2_type 87 510 -1977 565 195 0 0 chr17 53960622 53960709 -31477771 + Tigger7 DNA MER2_type 2401 2487 0 190 267 0 0 chr17 53960710 53960755 -31477725 - L2 LINE L2 -12 3260 3216 313 377 50 15 chr17 53961349 53961609 -31476871 - L2 LINE L2 -595 2719 2451 792 304 66 80 chr17 53961636 53962158 -31476322 + L2 LINE L2 2782 3294 -19 235 313 0 0 chr17 53962305 53962369 -31476111 + (CATA)n Simple_repeat Simple_repeat 3 66 0 2767 19 0 6 chr17 53962906 53963219 -31475261 + AluY SINE Alu 1 311 0 2152 24 0 109 chr17 53966305 53966634 -31471846 - L1PA3 LINE L1 -1505 4641 4349 7671 27 0 0 chr17 53966634 53968159 -31470321 + L1PA3 LINE L1 4628 6152 -3 22 109 0 0 chr17 53969049 53969141 -31469339 + AT_rich Low_complexity Low_complexity 1 92 0 1756 148 82 20 chr17 53969158 53969510 -31468970 + THE1C LTR MaLR 1 374 -1 9131 136 65 4 chr17 53969512 53971001 -31467479 + THE1C-int LTR MaLR 2 1580 0 1841 174 35 14 chr17 53971001 53971368 -31467112 + THE1C LTR MaLR 1 375 0 669 206 8 23 chr17 53971485 53971616 -31466864 + FAM SINE Alu 1 129 -56 192 404 37 18 chr17 53971644 53971753 -31466727 + MIR SINE MIR 41 151 -57 23 0 0 0 chr17 53972220 53972243 -31466237 + AT_rich Low_complexity Low_complexity 1 23 0 423 365 56 25 chr17 53972725 53973048 -31465432 + L2 LINE L2 2645 2977 -337 192 89 44 22 chr17 53973134 53973179 -31465301 + (TA)n Simple_repeat Simple_repeat 1 46 0 21 71 0 0 chr17 53973740 53973782 -31464698 + AT_rich Low_complexity Low_complexity 1 42 0 282 326 44 22 chr17 53974703 53974838 -31463642 + MIR SINE MIR 53 190 -72 658 316 77 4 chr17 53974891 53975125 -31463355 - MIR SINE MIR -10 252 2 513 280 0 0 chr17 53975462 53975569 -31462911 + FAM SINE Alu 20 126 -59 31 26 0 0 chr17 53975583 53975621 -31462859 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr17 53975698 53975727 -31462753 + AT_rich Low_complexity Low_complexity 1 29 0 688 41 10 10 chr17 53975796 53975893 -31462587 + (TTTC)n Simple_repeat Simple_repeat 4 100 0 243 0 0 0 chr17 53976102 53976129 -31462351 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 203 264 36 64 chr17 53976377 53976517 -31461963 - L2 LINE L2 -91 3222 3087 777 320 80 37 chr17 53976563 53976740 -31461740 + L2 LINE L2 2806 2974 -339 4940 100 35 9 chr17 53976740 53977487 -31460993 + MER4E LTR ERV1 1 766 0 777 320 80 37 chr17 53977487 53977641 -31460839 + L2 LINE L2 2974 3120 -193 216 0 0 0 chr17 53977641 53977665 -31460815 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 777 320 80 37 chr17 53977665 53977797 -31460683 + L2 LINE L2 3120 3290 -23 247 346 47 24 chr17 53978378 53978505 -31459975 - L2 LINE L2 0 3272 3143 2574 95 14 3 chr17 53978750 53979108 -31459372 - THE1B LTR MaLR -2 362 1 1824 196 62 35 chr17 53979137 53979530 -31458950 + MLT1C LTR MaLR 1 409 -58 234 0 0 0 chr17 53979530 53979556 -31458924 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1824 196 62 35 chr17 53979556 53979617 -31458863 + MLT1C LTR MaLR 409 467 0 23 33 0 0 chr17 53980179 53980209 -31458271 + AT_rich Low_complexity Low_complexity 1 30 0 751 249 71 73 chr17 53981294 53981640 -31456840 + MLT1H LTR MaLR 195 503 -2 1889 156 3 54 chr17 53982638 53982990 -31455490 + MER1B DNA MER1_type 4 337 0 422 299 81 47 chr17 53983120 53983621 -31454859 + L1MEc LINE L1 2162 2644 -3571 244 288 32 69 chr17 53983790 53984168 -31454312 + L1MEc LINE L1 3452 3815 -2400 348 326 124 48 chr17 53985566 53985857 -31452623 + MLT1J2 LTR MaLR 104 416 -34 210 367 102 0 chr17 53985917 53986015 -31452465 - L2 LINE L2 -9 3263 3156 12297 212 35 17 chr17 53986361 53990334 -31448146 - L1PA16 LINE L1 -8 6861 2963 1899 126 53 0 chr17 53990334 53990619 -31447861 - AluSx SINE Alu -8 304 5 12297 212 35 17 chr17 53990619 53991179 -31447301 - L1PA16 LINE L1 -3906 2963 2415 464 0 18 0 chr17 53991179 53991235 -31447245 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 12297 212 35 17 chr17 53991235 53992447 -31446033 - L1PA16 LINE L1 -4454 2415 1009 355 391 66 8 chr17 53992448 53992691 -31445789 + L2 LINE L2 2654 2910 -404 35 83 0 0 chr17 53995308 53995392 -31443088 + AT_rich Low_complexity Low_complexity 1 84 0 182 343 14 14 chr17 53995450 53995520 -31442960 + MIR SINE MIR 79 148 -114 234 179 0 0 chr17 53995680 53995736 -31442744 + (TA)n Simple_repeat Simple_repeat 1 56 0 2520 171 47 16 chr17 53995866 53996630 -31441850 + L1MA9 LINE L1 5016 5795 -517 258 111 49 25 chr17 53996664 53996745 -31441735 + (TA)n Simple_repeat Simple_repeat 2 84 0 1018 132 2 47 chr17 53996749 53996967 -31441513 + L1MA9 LINE L1 5748 5961 -195 242 139 56 28 chr17 53996981 53997053 -31441427 + (TA)n Simple_repeat Simple_repeat 2 75 0 297 0 0 0 chr17 53997053 53997086 -31441394 + (CA)n Simple_repeat Simple_repeat 2 34 0 2544 155 46 22 chr17 53997088 53997590 -31440890 + L1MA9 LINE L1 5794 6307 -5 1685 173 68 6 chr17 53997719 53998055 -31440425 + MER46B DNA MER2_type 1 232 -4 192 402 124 13 chr17 53998707 53998941 -31439539 - MIR SINE MIR -1 261 2 2373 84 0 0 chr17 53999422 53999720 -31438760 - AluSg SINE Alu -12 298 1 240 167 0 0 chr17 53999830 53999878 -31438602 + (CA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr17 54000326 54000347 -31438133 + AT_rich Low_complexity Low_complexity 1 21 0 23 86 0 0 chr17 54002854 54002912 -31435568 + AT_rich Low_complexity Low_complexity 1 58 0 24 0 0 70 chr17 54003202 54003245 -31435235 + AT_rich Low_complexity Low_complexity 1 40 0 2402 186 57 31 chr17 54004012 54004501 -31433979 - MER68 LTR ERV1 -13 549 48 424 174 132 1 chr17 54004640 54004828 -31433652 + MER63 DNA MER1_type 817 1054 -6 211 343 135 77 chr17 54006244 54006541 -31431939 + L2 LINE L2 2934 3247 -25 21 57 0 0 chr17 54006838 54006873 -31431607 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr17 54007497 54007527 -31430953 + AT_rich Low_complexity Low_complexity 1 30 0 857 325 80 32 chr17 54007633 54008248 -31430232 + MLT2F LTR ERVL 20 663 0 723 245 64 33 chr17 54008459 54008737 -31429743 + L1M4 LINE L1 2492 2777 -3369 193 283 18 0 chr17 54009010 54009123 -31429357 + (TA)n Simple_repeat Simple_repeat 2 116 0 268 257 0 0 chr17 54009611 54009681 -31428799 + MER5A DNA MER1_type 17 86 -103 2137 92 14 0 chr17 54010401 54010710 -31427770 + AluSx SINE Alu 6 318 0 297 315 109 52 chr17 54011398 54011665 -31426815 + L2 LINE L2 3032 3313 0 1346 256 69 42 chr17 54011757 54012381 -31426099 - L1MCc LINE L1 -1909 5032 4392 1746 177 0 16 chr17 54012500 54012849 -31425631 - AluJb SINE Alu 0 344 1 716 206 21 21 chr17 54013050 54013239 -31425241 + MER53 DNA DNA 1 189 0 374 303 80 60 chr17 54013924 54014337 -31424143 - L1MCc LINE L1 -2990 3951 3531 522 285 77 81 chr17 54014681 54015112 -31423368 - MLT1H LTR MaLR -14 535 107 295 310 65 23 chr17 54015267 54015483 -31422997 - L1MCc LINE L1 -5041 1902 1678 1774 153 25 34 chr17 54015485 54015839 -31422641 + THE1C LTR MaLR 1 351 -24 32 26 0 0 chr17 54015908 54015947 -31422533 + AT_rich Low_complexity Low_complexity 1 39 0 328 343 52 57 chr17 54016633 54017071 -31421409 - L1MCc LINE L1 -5965 458 23 390 330 102 31 chr17 54018513 54018837 -31419643 + L2 LINE L2 2967 3313 0 2394 60 3 3 chr17 54018895 54019193 -31419287 - AluY SINE Alu -1 310 13 542 285 92 52 chr17 54019234 54019560 -31418920 - MLT1K LTR MaLR -20 568 230 22 0 0 0 chr17 54020785 54020807 -31417673 + AT_rich Low_complexity Low_complexity 1 22 0 11417 61 0 1 chr17 54021433 54022909 -31415571 - L1PA6 LINE L1 -1055 5091 3618 7123 48 3 0 chr17 54022909 54023973 -31414507 + L1PA6 LINE L1 5111 6177 0 282 116 0 0 chr17 54024220 54024263 -31414217 + (TA)n Simple_repeat Simple_repeat 1 43 0 24 67 0 0 chr17 54024414 54024459 -31414021 + AT_rich Low_complexity Low_complexity 1 45 0 29 43 0 43 chr17 54024513 54024582 -31413898 + AT_rich Low_complexity Low_complexity 1 66 0 234 279 8 25 chr17 54025002 54025037 -31413443 + (TA)n Simple_repeat Simple_repeat 1 35 -85 1931 157 0 0 chr17 54025037 54025342 -31413138 + AluSx SINE Alu 1 305 -7 234 279 8 25 chr17 54025342 54025428 -31413052 + (TA)n Simple_repeat Simple_repeat 35 120 0 24 32 0 0 chr17 54025440 54025471 -31413009 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr17 54025550 54025577 -31412903 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr17 54025685 54025719 -31412761 + AT_rich Low_complexity Low_complexity 1 34 0 475 346 118 22 chr17 54025793 54026305 -31412175 + L1ME3 LINE L1 5256 5828 -334 21 36 0 0 chr17 54026390 54026418 -31412062 + AT_rich Low_complexity Low_complexity 1 28 0 232 77 77 0 chr17 54026635 54026700 -31411780 + (TA)n Simple_repeat Simple_repeat 1 70 0 322 310 0 23 chr17 54027073 54027160 -31411320 + MIR SINE MIR 66 150 -112 234 295 0 0 chr17 54027357 54027418 -31411062 + GA-rich Low_complexity Low_complexity 2 62 0 3256 109 14 16 chr17 54027639 54028151 -31410329 - MER9 LTR ERVK 0 511 1 21 71 0 0 chr17 54029170 54029212 -31409268 + AT_rich Low_complexity Low_complexity 1 42 0 2178 115 0 0 chr17 54029430 54029725 -31408755 - AluSg SINE Alu -14 296 2 17722 122 23 4 chr17 54029755 54032408 -31406072 + Charlie3 DNA MER1_type 2 2705 -5 23 33 0 0 chr17 54032808 54032838 -31405642 + AT_rich Low_complexity Low_complexity 1 30 0 192 125 0 0 chr17 54033351 54033383 -31405097 + (ATG)n Simple_repeat Simple_repeat 3 34 0 218 342 180 0 chr17 54033823 54033934 -31404546 + L2 LINE L2 3142 3272 0 273 367 50 11 chr17 54034663 54034843 -31403637 + MIR SINE MIR 66 252 -10 235 230 161 0 chr17 54035441 54035528 -31402952 - MIR SINE MIR 0 262 162 298 314 39 39 chr17 54036311 54036413 -31402067 + MER5B DNA MER1_type 6 107 -71 25 0 0 0 chr17 54036981 54037006 -31401474 + AT_rich Low_complexity Low_complexity 1 25 0 328 236 93 57 chr17 54037388 54037528 -31400952 + MER5B DNA MER1_type 34 178 0 944 184 35 15 chr17 54038433 54038634 -31399846 - MER57A LTR ERV1 0 403 199 6859 204 40 2 chr17 54038634 54039972 -31398508 + MSTA-int LTR MaLR 264 1651 0 2731 126 21 5 chr17 54039972 54040392 -31398088 + MSTA LTR MaLR 1 427 -1 1195 211 3 7 chr17 54041012 54041297 -31397183 - L1 LINE L1 -821 5325 5042 3686 232 18 22 chr17 54041300 54042346 -31396134 + L1 LINE L1 2829 3870 -2276 8116 152 16 9 chr17 54042715 54044094 -31394386 - Tigger1 DNA MER2_type -378 2040 653 216 0 0 0 chr17 54044095 54044119 -31394361 + (TG)n Simple_repeat Simple_repeat 1 24 0 318 118 0 0 chr17 54044220 54044271 -31394209 + L1P5 LINE L1 5477 5527 -624 3615 142 11 71 chr17 54044307 54044783 -31393697 - L1MA2 LINE L1 0 6304 5886 180 0 0 0 chr17 54044783 54044803 -31393677 + (TTA)n Simple_repeat Simple_repeat 3 22 0 3615 142 11 71 chr17 54044803 54045060 -31393420 - L1MA2 LINE L1 -418 5886 5615 1962 97 3 35 chr17 54045062 54045403 -31393077 - LTR7 LTR ERV1 -2 448 119 318 26 0 0 chr17 54045895 54045934 -31392546 + (TTTAA)n Simple_repeat Simple_repeat 2 40 0 7772 17 0 3 chr17 54045934 54047313 -31391167 - L1PA3 LINE L1 -8 6147 4771 228 346 45 38 chr17 54047348 54047481 -31390999 - MIR3 SINE MIR -72 136 3 21 0 0 0 chr17 54047697 54047718 -31390762 + AT_rich Low_complexity Low_complexity 1 21 0 1503 174 42 86 chr17 54048993 54049379 -31389101 + MLT1B LTR MaLR 20 388 -2 1566 173 75 13 chr17 54049380 54049698 -31388782 - MER44D DNA MER2_type -1 608 1 281 339 0 0 chr17 54049865 54049930 -31388550 + L2 LINE L2 3225 3289 -24 1235 98 16 0 chr17 54050735 54050929 -31387551 + L1MA4A LINE L1 6095 6291 -12 2099 115 3 3 chr17 54051720 54052016 -31386464 + AluSg SINE Alu 1 296 -14 25 75 0 0 chr17 54052037 54052090 -31386390 + AT_rich Low_complexity Low_complexity 1 53 0 1486 183 31 57 chr17 54052572 54052889 -31385591 + AluJo SINE Alu 1 309 -3 194 318 94 0 chr17 54053956 54054041 -31384439 - MIR SINE MIR -63 145 53 2100 109 0 13 chr17 54054538 54054851 -31383629 + AluSc SINE Alu 1 309 0 207 0 0 0 chr17 54055124 54055147 -31383333 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1596 147 37 50 chr17 54060508 54060808 -31377672 + AluJb SINE Alu 1 296 -16 1548 195 45 23 chr17 54063344 54063698 -31374782 - THE1C LTR MaLR 0 375 14 2495 47 3 0 chr17 54063926 54064225 -31374255 - AluY SINE Alu -11 300 1 326 286 116 102 chr17 54064437 54064997 -31373483 + L1M2 LINE L1 651 1218 -5631 384 22 0 0 chr17 54065097 54065142 -31373338 + (TG)n Simple_repeat Simple_repeat 2 46 0 3374 180 37 28 chr17 54065142 54065786 -31372694 - Tigger1 DNA MER2_type -1768 650 1 231 235 74 0 chr17 54066749 54066830 -31371650 + L1MC4 LINE L1 6614 6700 -1342 1763 212 24 9 chr17 54066931 54067355 -31371125 - L1MB5 LINE L1 -9 6165 5736 1834 271 10 6 chr17 54067370 54067991 -31370489 - L1M4 LINE L1 -2884 3760 3138 3032 275 54 54 chr17 54068036 54069619 -31368861 - L1M4 LINE L1 -4957 1585 3 665 267 17 0 chr17 54069631 54069803 -31368677 + MER58A DNA MER1_type 48 222 -2 204 184 0 0 chr17 54070559 54070608 -31367872 + GA-rich Low_complexity Low_complexity 2 50 0 276 259 24 0 chr17 54070958 54071043 -31367437 - L1MA9 LINE L1 -38 6274 6188 25 0 0 0 chr17 54071274 54071299 -31367181 + AT_rich Low_complexity Low_complexity 1 25 0 922 233 0 0 chr17 54071643 54071836 -31366644 - MER58B DNA MER1_type -32 309 117 24 0 0 0 chr17 54072497 54072521 -31365959 + AT_rich Low_complexity Low_complexity 1 24 0 5005 138 2 4 chr17 54072556 54073354 -31365126 - L1PA14 LINE L1 0 6161 5365 452 289 0 0 chr17 54073354 54073458 -31365022 - MER58B DNA MER1_type -237 104 1 646 193 8 0 chr17 54073810 54073929 -31364551 + FLAM_C SINE Alu 2 121 -12 252 0 0 0 chr17 54073929 54073957 -31364523 + (CA)n Simple_repeat Simple_repeat 2 29 0 193 103 0 0 chr17 54074130 54074159 -31364321 - MIR SINE MIR -13 249 221 944 113 17 11 chr17 54074223 54074400 -31364080 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 465 211 30 60 chr17 54074537 54074670 -31363810 - L1MB3 LINE L1 -164 6019 5891 2027 87 0 4 chr17 54075638 54075903 -31362577 + AluSx SINE Alu 35 298 -14 189 0 0 0 chr17 54076039 54076060 -31362420 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 186 349 0 0 chr17 54076783 54076846 -31361634 - MIR3 SINE MIR -13 195 133 287 269 58 39 chr17 54077331 54077435 -31361045 - MIR3 SINE MIR -19 189 84 921 219 0 0 chr17 54078016 54078208 -31360272 - AluJb SINE Alu 0 312 121 759 178 22 0 chr17 54078223 54078358 -31360122 - FLAM_C SINE Alu 0 143 6 294 106 0 0 chr17 54078940 54078987 -31359493 + (CA)n Simple_repeat Simple_repeat 1 47 0 21 57 0 0 chr17 54080304 54080339 -31358141 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr17 54080613 54080651 -31357829 + AT_rich Low_complexity Low_complexity 1 38 0 552 288 79 48 chr17 54081189 54081528 -31356952 + L1MEd LINE L1 1102 1454 -4962 2015 139 10 0 chr17 54081528 54081829 -31356651 + AluSg1 SINE Alu 2 305 -4 552 288 79 48 chr17 54081829 54081843 -31356637 + L1MEd LINE L1 1454 1466 -4950 21 57 0 0 chr17 54081929 54081964 -31356516 + AT_rich Low_complexity Low_complexity 1 35 0 291 317 115 27 chr17 54082390 54082992 -31355488 + L1M4 LINE L1 3115 3769 -2377 776 192 20 0 chr17 54082996 54083147 -31355333 + MLT1D LTR MaLR 6 159 -346 357 93 0 0 chr17 54083295 54083349 -31355131 + (CA)n Simple_repeat Simple_repeat 1 54 0 198 103 0 0 chr17 54083707 54083736 -31354744 + (TG)n Simple_repeat Simple_repeat 1 29 0 301 169 0 65 chr17 54083736 54083813 -31354667 + L1MEd LINE L1 1996 2067 -4359 2375 106 49 13 chr17 54083823 54084209 -31354271 - MLT2A1 LTR ERVL -44 400 1 183 100 0 0 chr17 54084242 54084272 -31354208 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 6649 202 29 20 chr17 54084314 54084380 -31354100 + L1PA15 LINE L1 3817 3881 -2265 243 0 0 0 chr17 54084380 54084407 -31354073 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6649 202 29 20 chr17 54084407 54084740 -31353740 + L1PA15 LINE L1 3881 4210 -1936 2012 88 48 0 chr17 54084740 54085013 -31353467 - AluY SINE Alu -13 298 13 6649 202 29 20 chr17 54085013 54085488 -31352992 + L1PA15 LINE L1 4210 4679 -1467 206 22 44 44 chr17 54085488 54085533 -31352947 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 6649 202 29 20 chr17 54085533 54086184 -31352296 + L1PA15 LINE L1 4679 5357 -789 3234 159 39 4 chr17 54086290 54087028 -31351452 + L1PA15 LINE L1 5361 6156 0 255 229 57 14 chr17 54087150 54087220 -31351260 + L1ME3A LINE L1 6070 6142 -28 306 0 0 0 chr17 54087424 54087458 -31351022 + (CA)n Simple_repeat Simple_repeat 1 34 0 890 150 0 0 chr17 54087946 54088079 -31350401 + FLAM_C SINE Alu 1 133 0 285 109 0 0 chr17 54089461 54089507 -31348973 + (CA)n Simple_repeat Simple_repeat 1 46 0 213 154 0 0 chr17 54089833 54089872 -31348608 + (TG)n Simple_repeat Simple_repeat 1 39 0 234 222 0 0 chr17 54089872 54089926 -31348554 + L1MC4 LINE L1 6653 6706 -1336 * 2173 223 35 9 chr17 54089887 54090430 -31348050 - L1MC3 LINE L1 -1139 6646 6090 281 277 136 45 chr17 54093796 54093973 -31344507 + MIR SINE MIR 14 206 -56 22 35 0 0 chr17 54093987 54094016 -31344464 + AT_rich Low_complexity Low_complexity 1 29 0 468 219 88 36 chr17 54094203 54094340 -31344140 - MIR SINE MIR 0 262 119 198 338 14 40 chr17 54094533 54094607 -31343873 - L2 LINE L2 -8 3264 3193 207 301 14 0 chr17 54096059 54096132 -31342348 - MIR SINE MIR -33 229 156 2417 100 25 6 chr17 54096252 54096613 -31341867 - L1PB1 LINE L1 -2 6149 5782 231 117 17 33 chr17 54096613 54096673 -31341807 + (TA)n Simple_repeat Simple_repeat 2 60 0 1938 114 5 3 chr17 54096677 54096978 -31341502 - L1ME LINE L1 -297 5824 5521 2841 180 82 3 chr17 54096979 54097849 -31340631 + L1ME LINE L1 4549 5502 -649 223 63 16 63 chr17 54097949 54098012 -31340468 + (GGGTG)n Simple_repeat Simple_repeat 3 62 0 2028 153 9 24 chr17 54098084 54098536 -31339944 - LTR7 LTR ERV1 -5 445 1 1641 117 56 8 chr17 54098544 54098810 -31339670 - L1M1 LINE L1 -691 5611 5333 1712 144 4 23 chr17 54098821 54099084 -31339396 - AluSx SINE Alu -12 300 43 407 241 0 12 chr17 54099107 54099190 -31339290 - AluS SINE Alu -218 94 13 883 191 20 10 chr17 54099202 54099406 -31339074 - L1 LINE L1 -814 5332 5127 2141 142 8 40 chr17 54099412 54099786 -31338694 + THE1C LTR MaLR 14 375 0 8385 138 78 27 chr17 54099786 54101289 -31337191 + THE1C-int LTR MaLR 1 1580 0 2131 154 8 46 chr17 54101289 54101679 -31336801 + THE1C LTR MaLR 1 375 0 5929 175 15 15 chr17 54101679 54102863 -31335617 - L1 LINE L1 -903 5243 4060 1603 208 3 0 chr17 54102893 54103187 -31335293 + AluJo SINE Alu 1 295 -17 244 319 153 12 chr17 54103589 54103830 -31334650 - L2 LINE L2 -1216 2098 1824 201 39 0 0 chr17 54103867 54103893 -31334587 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 1716 177 0 10 chr17 54104276 54104570 -31333910 + AluJb SINE Alu 1 291 -21 363 265 51 43 chr17 54105601 54105718 -31332762 - MIR3 SINE MIR -8 200 83 203 276 0 92 chr17 54105855 54105942 -31332538 + L2 LINE L2 3194 3272 0 24 0 0 0 chr17 54106110 54106134 -31332346 + AT_rich Low_complexity Low_complexity 1 24 0 2733 19 0 7 chr17 54106890 54107199 -31331281 - AluY SINE Alu -4 307 1 235 313 0 0 chr17 54107736 54107800 -31330680 + (TATG)n Simple_repeat Simple_repeat 3 66 0 320 261 33 112 chr17 54107947 54108188 -31330292 - L2 LINE L2 -19 3294 3073 1279 114 11 5 chr17 54108354 54108538 -31329942 - AluY SINE Alu -121 190 6 259 43 0 43 chr17 54108624 54108671 -31329809 + (TA)n Simple_repeat Simple_repeat 2 46 0 204 214 0 0 chr17 54109486 54109528 -31328952 + L2 LINE L2 3263 3304 -9 593 105 23 0 chr17 54109684 54109770 -31328710 + AluY SINE Alu 217 304 -7 855 256 24 24 chr17 54109849 54110099 -31328381 + MLT1C LTR MaLR 218 467 0 1841 103 110 0 chr17 54111526 54111799 -31326681 + AluSg SINE Alu 1 303 -7 21 36 0 0 chr17 54111848 54111876 -31326604 + AT_rich Low_complexity Low_complexity 1 28 0 1176 228 112 13 chr17 54112418 54112856 -31325624 + MLT1D LTR MaLR 7 467 0 28 79 0 0 chr17 54113115 54113178 -31325302 + AT_rich Low_complexity Low_complexity 1 63 0 227 361 105 42 chr17 54113204 54113586 -31324894 + L2 LINE L2 2560 2965 -349 673 287 14 29 chr17 54113650 54113859 -31324621 - MIR SINE MIR -55 207 2 219 233 0 0 chr17 54115010 54115053 -31323427 + (TG)n Simple_repeat Simple_repeat 2 44 0 228 261 108 72 chr17 54115134 54115245 -31323235 + LTR33A LTR ERVL 76 190 -333 582 251 62 20 chr17 54115313 54115508 -31322972 + LTR33 LTR ERVL 309 511 -10 413 318 49 29 chr17 54115629 54115874 -31322606 - L1ME LINE L1 -334 5787 5538 1455 175 140 9 chr17 54115874 54116189 -31322291 - MLT1A1 LTR MaLR 0 365 10 411 250 58 18 chr17 54116201 54116414 -31322066 - L1ME LINE L1 -625 5545 5322 2077 146 3 0 chr17 54117139 54117447 -31321033 + AluSx SINE Alu 1 309 -3 385 254 97 9 chr17 54118077 54118191 -31320289 - MER5C DNA MER1_type -200 124 1 1725 148 35 7 chr17 54118214 54118375 -31320105 - AluSx SINE Alu -20 292 118 315 0 0 0 chr17 54118375 54118410 -31320070 + (TG)n Simple_repeat Simple_repeat 2 36 0 1725 148 35 7 chr17 54118410 54118532 -31319948 - AluSx SINE Alu -194 118 1 2096 101 0 7 chr17 54119440 54119718 -31318762 + AluSg1 SINE Alu 2 277 -32 240 35 0 0 chr17 54119718 54119747 -31318733 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 1757 219 51 20 chr17 54120186 54120638 -31317842 - MLT1C LTR MaLR -1 466 1 1248 288 59 16 chr17 54121827 54122023 -31316457 + MSTD LTR MaLR 1 187 -209 189 0 0 0 chr17 54122023 54122044 -31316436 + (TC)n Simple_repeat Simple_repeat 1 21 0 1248 288 59 16 chr17 54122044 54122222 -31316258 + MSTD LTR MaLR 187 391 -5 702 345 126 2 chr17 54122249 54122663 -31315817 - LTR33 LTR ERVL -21 500 36 958 346 167 34 chr17 54123595 54124653 -31313827 + L2 LINE L2 87 1285 -2029 1836 190 43 64 chr17 54124658 54124977 -31313503 - L1MA6 LINE L1 -228 6072 5765 1988 118 70 20 chr17 54124977 54125334 -31313146 + THE1C LTR MaLR 1 375 0 1836 190 43 64 chr17 54125334 54125482 -31312998 - L1MA6 LINE L1 -535 5765 5615 306 53 0 0 chr17 54125451 54125489 -31312991 + L1M1 LINE L1 5620 5657 -643 * 2145 119 3 0 chr17 54125495 54125798 -31312682 - AluY SINE Alu -7 304 1 449 339 11 16 chr17 54125802 54125991 -31312489 + L2 LINE L2 2091 2278 -1036 25 0 0 0 chr17 54126348 54126373 -31312107 + AT_rich Low_complexity Low_complexity 1 25 0 479 263 22 29 chr17 54130403 54130540 -31307940 + MIR SINE MIR 18 153 -109 284 120 20 0 chr17 54132337 54132387 -31306093 + CT-rich Low_complexity Low_complexity 2 52 0 21 57 0 0 chr17 54133277 54133312 -31305168 + AT_rich Low_complexity Low_complexity 1 35 0 1935 152 134 11 chr17 54134561 54134942 -31303538 - MSTA LTR MaLR 0 428 1 8364 182 18 20 chr17 54134942 54136596 -31301884 - MSTA-int LTR MaLR 0 1651 1 1526 139 207 25 chr17 54136596 54136919 -31301561 - MSTA LTR MaLR 0 428 47 656 144 54 0 chr17 54136919 54137030 -31301450 + L1MA5A LINE L1 5981 6097 -200 277 228 0 0 chr17 54137030 54137087 -31301393 - MSTA LTR MaLR -370 58 2 183 296 161 12 chr17 54137346 54137427 -31301053 - L2 LINE L2 -74 3198 3106 1032 202 12 8 chr17 54137569 54137821 -31300659 - L1MA4 LINE L1 -5 6295 6043 654 203 13 7 chr17 54137826 54137979 -31300501 + L1MA5A LINE L1 5153 5306 -840 212 683 0 0 chr17 54137979 54138143 -31300337 + A-rich Low_complexity Low_complexity 1 164 0 4384 154 59 11 chr17 54138146 54138972 -31299508 + L1MA5A LINE L1 5297 6162 -135 190 0 67 0 chr17 54138972 54139002 -31299478 + (TA)n Simple_repeat Simple_repeat 2 33 0 23 0 0 0 chr17 54139084 54139107 -31299373 + AT_rich Low_complexity Low_complexity 1 23 0 190 288 34 0 chr17 54139130 54139189 -31299291 + MIR SINE MIR 47 107 -155 295 184 53 13 chr17 54139225 54139301 -31299179 - L1MB2 LINE L1 -54 6117 6039 200 360 63 32 chr17 54139512 54139701 -31298779 - L2 LINE L2 -216 3056 2862 2363 97 0 0 chr17 54139857 54140168 -31298312 - AluY SINE Alu 0 311 1 383 283 243 11 chr17 54140507 54140756 -31297724 + MLT1H1 LTR MaLR 1 289 -260 227 149 0 21 chr17 54140789 54140836 -31297644 + (GAAA)n Simple_repeat Simple_repeat 4 49 0 376 292 0 78 chr17 54140942 54141027 -31297453 + MLT1H1 LTR MaLR 449 518 -77 1838 164 0 30 chr17 54141027 54141331 -31297149 + AluSx SINE Alu 2 296 -16 376 292 0 78 chr17 54141331 54141399 -31297081 + MLT1H1 LTR MaLR 518 590 -5 29 0 0 0 chr17 54142018 54142047 -31296433 + AT_rich Low_complexity Low_complexity 1 29 0 264 244 130 17 chr17 54142850 54142965 -31295515 + MIR3 SINE MIR 67 194 -14 500 322 167 33 chr17 54143039 54143535 -31294945 - L2 LINE L2 -9 3304 2751 265 377 38 0 chr17 54144789 54144895 -31293585 + MIR3 SINE MIR 85 194 -14 3688 212 21 11 chr17 54145417 54146429 -31292051 + L1P LINE L1 4405 5429 -737 2687 248 70 52 chr17 54146774 54147426 -31291054 + L1M4b LINE L1 11 650 -6488 184 0 0 88 chr17 54147426 54147460 -31291020 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2687 248 70 52 chr17 54147460 54148380 -31290100 + L1M4b LINE L1 650 1552 -5586 501 103 26 0 chr17 54148380 54148458 -31290022 + MADE1 DNA Mariner 1 80 0 2687 248 70 52 chr17 54148458 54149165 -31289315 + L1M4b LINE L1 1552 2517 -4621 1688 206 32 64 chr17 54149416 54149756 -31288724 + MSTB LTR MaLR 1 350 -76 2141 122 0 0 chr17 54149756 54150050 -31288430 + AluSx SINE Alu 1 294 -18 1688 206 32 64 chr17 54150050 54150074 -31288406 + MSTB LTR MaLR 350 373 -53 1888 165 0 0 chr17 54150074 54150353 -31288127 + AluSx SINE Alu 3 281 -31 198 0 0 0 chr17 54150358 54150380 -31288100 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1688 206 32 64 chr17 54150380 54150446 -31288034 + MSTB LTR MaLR 377 424 -2 2078 205 88 15 chr17 54150677 54151336 -31287144 + L1MB8 LINE L1 5156 5861 -317 503 340 53 5 chr17 54151412 54151618 -31286862 - MIR SINE MIR -10 252 37 2266 74 0 32 chr17 54151677 54151987 -31286493 + AluY SINE Alu 1 300 -11 22 35 0 0 chr17 54152744 54152773 -31285707 + AT_rich Low_complexity Low_complexity 1 29 0 347 156 28 106 chr17 54153168 54153269 -31285211 + L1M2 LINE L1 5468 5545 -697 2508 58 0 0 chr17 54153269 54153577 -31284903 + AluY SINE Alu 1 308 -3 347 156 28 106 chr17 54153577 54153605 -31284875 + L1M2 LINE L1 5545 5574 -668 26 0 0 0 chr17 54154561 54154587 -31283893 + AT_rich Low_complexity Low_complexity 1 26 0 395 198 11 44 chr17 54154835 54154926 -31283554 + MER21B LTR ERV1 1 88 -775 3381 213 46 19 chr17 54154930 54155648 -31282832 + MER21B LTR ERV1 43 779 -84 1579 161 13 36 chr17 54156050 54156355 -31282125 + AluJb SINE Alu 1 298 -14 646 320 68 52 chr17 54156934 54157201 -31281279 - L2 LINE L2 -1 3312 3036 2006 105 14 0 chr17 54157201 54157486 -31280994 + AluSp SINE Alu 25 313 0 646 320 68 52 chr17 54157486 54157587 -31280893 - L2 LINE L2 -277 3036 2938 228 321 116 9 chr17 54157587 54157699 -31280781 + L2 LINE L2 3140 3263 -9 329 296 62 0 chr17 54157922 54158003 -31280477 + L2 LINE L2 3187 3272 0 697 359 93 38 chr17 54158273 54158556 -31279924 + L2 LINE L2 1616 1882 -1432 7532 22 0 0 chr17 54158556 54159591 -31278889 - L1PA3 LINE L1 0 6155 5106 697 359 93 38 chr17 54159591 54160132 -31278348 + L2 LINE L2 1882 2486 -828 5843 171 16 4 chr17 54160167 54161225 -31277255 - L1MC1 LINE L1 -9 6324 5254 215 372 155 22 chr17 54161278 54161595 -31276885 + L2 LINE L2 2585 2943 -371 232 313 98 31 chr17 54161920 54162083 -31276397 + MLT1H1 LTR MaLR 341 514 -41 219 108 47 68 chr17 54162231 54162379 -31276101 + (TATAA)n Simple_repeat Simple_repeat 4 148 0 234 217 16 69 chr17 54162399 54162588 -31275892 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 583 298 12 12 chr17 54162593 54162764 -31275716 - MIR SINE MIR 0 262 92 1569 241 49 29 chr17 54162997 54163450 -31275030 + MER74B LTR ERVL 75 536 -86 788 242 79 9 chr17 54163321 54163548 -31274932 - MER88 LTR ERVL -220 244 2 * 246 167 24 0 chr17 54163857 54163899 -31274581 + MER70B LTR ERVL 455 497 -81 2102 78 10 20 chr17 54164056 54164352 -31274128 - AluY SINE Alu -18 293 1 289 357 101 21 chr17 54164399 54164685 -31273795 + L1MEd LINE L1 195 503 -5616 2097 161 50 41 chr17 54164717 54165177 -31273303 - L1MA2 LINE L1 -12 6292 5829 5580 176 38 5 chr17 54165293 54166425 -31272055 + L1 LINE L1 3871 5039 -1107 758 284 110 22 chr17 54166787 54167462 -31271018 + L1MEd LINE L1 904 1677 -866 21 0 0 0 chr17 54167521 54167542 -31270938 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 54167792 54167821 -31270659 + AT_rich Low_complexity Low_complexity 1 29 0 399 329 13 13 chr17 54168229 54168381 -31270099 + L2 LINE L2 3143 3294 -19 858 335 63 19 chr17 54169388 54169800 -31268680 + MLT1K LTR MaLR 7 436 -152 583 337 93 4 chr17 54169803 54170082 -31268398 + L2 LINE L2 2851 3154 -159 867 171 119 52 chr17 54170087 54170297 -31268183 - AluJo SINE Alu -11 301 78 360 276 104 8 chr17 54170297 54170431 -31268049 + L2 LINE L2 3167 3313 0 22 56 0 0 chr17 54170559 54170595 -31267885 + AT_rich Low_complexity Low_complexity 1 36 0 1362 126 14 0 chr17 54170877 54171084 -31267396 + MER2 DNA MER2_type 1 210 -135 24 77 0 0 chr17 54171093 54171145 -31267335 + AT_rich Low_complexity Low_complexity 1 52 0 251 213 43 0 chr17 54171159 54171206 -31267274 + MER2 DNA MER2_type 296 344 -1 1133 222 3 56 chr17 54171423 54171459 -31267021 - L1P LINE L1 -1159 4987 4951 2383 66 3 3 chr17 54171459 54171762 -31266718 - AluY SINE Alu -8 303 1 1133 222 3 56 chr17 54171762 54172049 -31266431 - L1P LINE L1 -1195 4951 4681 2283 158 15 12 chr17 54172149 54172555 -31265925 - Tigger1 DNA MER2_type -1 2417 2011 226 277 284 7 chr17 54173080 54173221 -31265259 - MER5A DNA MER1_type -6 183 4 28 29 0 0 chr17 54174812 54174847 -31263633 + AT_rich Low_complexity Low_complexity 1 35 0 394 278 19 8 chr17 54174892 54175020 -31263460 - L1PA16 LINE L1 -7 6157 6032 2891 199 49 26 chr17 54175135 54175415 -31263065 - MER67C LTR ERV1 -8 702 430 2020 190 23 43 chr17 54175415 54175852 -31262628 + MSTB1 LTR MaLR 1 428 -4 2891 199 49 26 chr17 54175852 54176221 -31262259 - MER67C LTR ERV1 -280 430 38 1594 210 68 26 chr17 54176221 54176645 -31261835 + LTR47B LTR ERVL 1 442 -1 556 89 13 0 chr17 54176714 54176793 -31261687 + MADE1 DNA Mariner 1 80 0 495 0 0 0 chr17 54177504 54177559 -31260921 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1496 196 0 14 chr17 54177561 54177847 -31260633 - AluJb SINE Alu -30 282 1 221 102 68 0 chr17 54178509 54178568 -31259912 + (TA)n Simple_repeat Simple_repeat 2 64 0 33 32 0 32 chr17 54178633 54178673 -31259807 + AT_rich Low_complexity Low_complexity 1 40 -20 2264 63 3 10 chr17 54178673 54178976 -31259504 - AluY SINE Alu -10 301 1 33 32 0 32 chr17 54178976 54178997 -31259483 + AT_rich Low_complexity Low_complexity 40 60 0 204 117 33 17 chr17 54179023 54179083 -31259397 + (TATAA)n Simple_repeat Simple_repeat 5 65 0 246 223 54 8 chr17 54179084 54179214 -31259266 + (TA)n Simple_repeat Simple_repeat 2 137 0 213 65 0 0 chr17 54179214 54179245 -31259235 + (CA)n Simple_repeat Simple_repeat 2 32 0 512 290 42 47 chr17 54179380 54179763 -31258717 - L1MEc LINE L1 -3493 3047 2667 230 276 145 42 chr17 54179831 54180114 -31258366 - L1MEc LINE L1 -4062 2659 2348 357 238 119 73 chr17 54180314 54180506 -31257974 - L1MEc LINE L1 -4505 2035 1853 1810 197 10 25 chr17 54180506 54180902 -31257578 + MLT1B LTR MaLR 1 390 0 357 238 119 73 chr17 54180902 54181214 -31257266 - L1MEc LINE L1 -4687 1853 1508 2396 139 14 19 chr17 54181271 54181703 -31256777 - L1MA6 LINE L1 0 6300 5871 2546 187 30 20 chr17 54181703 54181806 -31256674 - L1MA6 LINE L1 -706 5585 5485 2135 113 3 7 chr17 54181806 54182106 -31256374 - AluSx SINE Alu -13 299 1 2546 187 30 20 chr17 54182106 54182800 -31255680 - L1MA6 LINE L1 -806 5485 4782 322 106 0 0 chr17 54183261 54183308 -31255172 - Alu SINE Alu -256 47 1 23 54 0 0 chr17 54184351 54184388 -31254092 + AT_rich Low_complexity Low_complexity 1 37 0 358 287 26 72 chr17 54184938 54185133 -31253347 - L2 LINE L2 0 3313 3128 275 247 0 0 chr17 54185211 54185300 -31253180 - L1M4 LINE L1 -770 5376 5288 444 100 50 0 chr17 54185927 54186007 -31252473 + L1MA1 LINE L1 6219 6302 0 301 294 185 0 chr17 54186078 54186197 -31252283 + MIR SINE MIR 111 251 -11 2328 65 7 0 chr17 54186243 54186537 -31251943 - AluY SINE Alu -13 298 3 299 314 39 52 chr17 54187091 54187244 -31251236 + MIR SINE MIR 83 233 -29 3200 209 42 41 chr17 54187312 54188007 -31250473 - L1MA9 LINE L1 -4 6308 5615 234 0 0 0 chr17 54188007 54188033 -31250447 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 538 130 0 0 chr17 54188033 54188110 -31250370 - AluSc SINE Alu -30 279 203 3200 209 42 41 chr17 54188110 54188537 -31249943 - L1MA9 LINE L1 -696 5616 5175 28 0 0 0 chr17 54189248 54189276 -31249204 + AT_rich Low_complexity Low_complexity 1 28 0 2395 46 7 10 chr17 54189505 54189811 -31248669 + AluY SINE Alu 1 305 -6 4847 187 25 19 chr17 54239842 54240752 -31197728 - HUERS-P3b LTR ERV1 -5456 1962 1047 709 234 11 17 chr17 54240782 54240957 -31197523 + L1M2 LINE L1 5618 5791 -500 3043 140 2 66 chr17 54241090 54241298 -31197182 - L1M1 LINE L1 -515 5787 5567 2173 129 3 0 chr17 54241298 54241607 -31196873 - AluSx SINE Alu -2 310 1 3043 140 2 66 chr17 54241607 54242191 -31196289 - L1M1 LINE L1 -735 5567 5045 1990 174 36 42 chr17 54242298 54242617 -31195863 - MLT1C-int LTR MaLR -926 445 128 2216 114 3 0 chr17 54242617 54242925 -31195555 - AluSg SINE Alu -1 309 1 1990 174 36 42 chr17 54242925 54243053 -31195427 - MLT1C-int LTR MaLR -1243 128 1 1072 261 73 9 chr17 54243076 54243405 -31195075 - MLT1C LTR MaLR -36 431 82 4633 208 34 11 chr17 54243512 54244067 -31194413 - L1M1 LINE L1 -1112 5034 4493 215 30 0 30 chr17 54244067 54244100 -31194380 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4633 208 34 11 chr17 54244100 54244699 -31193781 - L1M1 LINE L1 -1653 4493 3854 430 198 0 12 chr17 54244799 54244885 -31193595 - MLT1C LTR MaLR -382 85 1 698 277 137 33 chr17 54244886 54245279 -31193201 + L2 LINE L2 2864 3297 -16 2181 220 21 37 chr17 54246135 54246703 -31191777 - MER82 DNA MER2_type -91 562 4 1354 314 138 11 chr17 54246707 54247270 -31191210 - Zaphod DNA AcHobo -3377 654 20 183 289 289 0 chr17 54247782 54247865 -31190615 + L2 LINE L2 3156 3262 -10 235 293 95 9 chr17 54248086 54248202 -31190278 + L1ME LINE L1 5556 5681 -440 194 261 93 112 chr17 54250493 54250654 -31187826 + L2 LINE L2 2940 3097 -216 182 269 19 39 chr17 54250793 54250845 -31187635 + L2 LINE L2 3203 3253 -60 3275 222 40 55 chr17 54251519 54252612 -31185868 + L1MA6 LINE L1 3079 4175 -3390 2767 16 0 0 chr17 54252612 54252919 -31185561 - AluYa5 SINE Alu -4 307 1 3275 222 40 55 chr17 54252919 54253222 -31185258 + L1MA6 LINE L1 4175 4481 -3084 * 5459 196 60 5 chr17 54253199 54253488 -31184992 + L1MA6 LINE L1 5487 5759 -1820 195 42 0 0 chr17 54253488 54253512 -31184968 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 5459 196 60 5 chr17 54253512 54254483 -31183997 + L1MA6 LINE L1 5759 6817 -762 5493 148 15 32 chr17 54254590 54255506 -31182974 + MER51-int LTR ERV1 2377 3277 -5642 647 223 92 0 chr17 54255498 54255628 -31182852 + MER51-int LTR ERV1 4541 4682 -4237 * 4208 133 35 3 chr17 54255629 54256277 -31182203 + MER51-int LTR ERV1 4901 5569 -3350 4124 183 24 8 chr17 54256269 54257008 -31181472 + MER51-int LTR ERV1 6162 6912 -2007 * 476 209 0 9 chr17 54257019 54257129 -31181351 + MER51-int LTR ERV1 6874 6982 -1937 676 192 12 12 chr17 54257133 54257305 -31181175 + MER51-int LTR ERV1 3954 4125 -3691 1716 176 0 3 chr17 54257599 54257911 -31180569 - AluY SINE Alu 0 311 1 1515 183 71 3 chr17 54258074 54258397 -31180083 + L1MA6 LINE L1 7048 7392 -327 1694 114 11 0 chr17 54258406 54258668 -31179812 + L1MA6 LINE L1 7455 7719 0 488 303 122 14 chr17 54259104 54259325 -31179155 - HAL1 LINE L1 -2202 305 61 242 229 55 64 chr17 54260918 54261027 -31177453 - LTR67 LTR ERVL -8 549 442 393 314 0 0 chr17 54261516 54261621 -31176859 + L2 LINE L2 2466 2570 -744 228 118 0 0 chr17 54261623 54261657 -31176823 - MLT1B LTR MaLR -32 358 325 8897 225 16 14 chr17 54262627 54264863 -31173617 - L1P LINE L1 -1278 4868 2630 2480 126 14 0 chr17 54265046 54265469 -31173011 + L1P4 LINE L1 5210 5637 -528 273 271 0 0 chr17 54265503 54265588 -31172892 + L1M3c LINE L1 1352 1436 -4705 2166 142 0 3 chr17 54265720 54266031 -31172449 - AluSx SINE Alu -2 310 1 371 296 51 44 chr17 54266031 54266380 -31172100 - L1M3a LINE L1 -4831 1822 1470 235 343 17 83 chr17 54266515 54266696 -31171784 - L1M3a LINE L1 -5252 1401 1233 6779 116 84 29 chr17 54266712 54267923 -31170557 - MER52C LTR ERV1 0 1278 1 2236 106 0 0 chr17 54268068 54268379 -31170101 - AluY SINE Alu 0 311 1 233 278 14 0 chr17 54268384 54268456 -31170024 - L1M3a LINE L1 -5814 839 767 226 363 38 0 chr17 54268982 54269062 -31169418 + L2 LINE L2 3231 3313 0 33 0 0 0 chr17 54270248 54270281 -31168199 + AT_rich Low_complexity Low_complexity 1 33 0 2265 105 0 10 chr17 54270395 54270708 -31167772 - AluSx SINE Alu 0 312 3 240 296 42 0 chr17 54270819 54270890 -31167590 + MIR SINE MIR 141 214 -48 1142 231 13 0 chr17 54272564 54272802 -31165678 + MLT1A1 LTR MaLR 125 365 0 267 318 50 64 chr17 54273038 54273258 -31165222 + L2 LINE L2 2196 2412 -902 21 0 0 0 chr17 54274056 54274077 -31164403 + AT_rich Low_complexity Low_complexity 1 21 0 359 256 141 25 chr17 54275064 54275185 -31163295 + MER5B DNA MER1_type 44 178 0 205 343 209 0 chr17 54275191 54275325 -31163155 + MIR SINE MIR 46 207 -55 25 51 0 0 chr17 54275393 54275432 -31163048 + AT_rich Low_complexity Low_complexity 1 39 0 241 329 62 62 chr17 54276734 54276944 -31161536 - MLT1I LTR MaLR -136 273 64 24 53 0 0 chr17 54277137 54277175 -31161305 + AT_rich Low_complexity Low_complexity 1 38 0 4997 145 36 8 chr17 54277303 54278200 -31160280 - L1MA8 LINE L1 -8 6283 5362 1247 209 42 0 chr17 54279027 54279338 -31159142 - MER33 DNA MER1_type 0 324 1 1225 88 203 5 chr17 54279759 54279976 -31158504 - L1MA2 LINE L1 0 6304 6045 1844 133 4 0 chr17 54280076 54280331 -31158149 - AluSq SINE Alu -57 256 1 6571 193 9 2 chr17 54280332 54281652 -31156828 - L1MA8 LINE L1 -1584 4562 3234 761 196 81 6 chr17 54281769 54281942 -31156538 + MLT1E1 LTR MaLR 469 654 0 32 43 0 0 chr17 54281990 54282036 -31156444 + AT_rich Low_complexity Low_complexity 1 46 0 308 291 126 31 chr17 54282055 54282412 -31156068 + L1ME LINE L1 4457 4847 -1299 978 308 88 20 chr17 54282686 54283403 -31155077 - L2 LINE L2 -2 3311 2546 766 264 100 28 chr17 54283450 54283893 -31154587 + L1ME LINE L1 5255 5729 -433 263 276 32 32 chr17 54283998 54284121 -31154359 + L1ME LINE L1 5587 5709 -461 628 120 0 0 chr17 54284237 54284329 -31154151 + AluY SINE Alu 41 132 -179 180 0 0 0 chr17 54284329 54284349 -31154131 + (A)n Simple_repeat Simple_repeat 1 20 0 2137 94 63 0 chr17 54284351 54284637 -31153843 + AluY SINE Alu 1 304 -7 24 0 0 0 chr17 54284660 54284684 -31153796 + AT_rich Low_complexity Low_complexity 1 24 0 254 146 0 18 chr17 54284768 54284823 -31153657 + (CATA)n Simple_repeat Simple_repeat 2 55 0 2280 126 0 0 chr17 54286407 54286717 -31151763 + AluSg SINE Alu 1 310 0 456 177 105 32 chr17 54287183 54287307 -31151173 + L1PA15-16 LINE L1 2488 2620 -4229 236 278 10 62 chr17 54287474 54287571 -31150909 + L1MD3 LINE L1 7185 7276 -719 428 250 26 9 chr17 54287574 54287690 -31150790 + MLT1F1 LTR MaLR 7 124 -443 1969 248 25 18 chr17 54287703 54288272 -31150208 + L1MD3 LINE L1 7416 7988 -7 194 238 24 0 chr17 54288391 54288433 -31150047 + MIR SINE MIR 12 54 -208 2324 67 7 7 chr17 54288566 54288863 -31149617 - AluY SINE Alu -14 297 1 25 0 0 0 chr17 54289729 54289754 -31148726 + AT_rich Low_complexity Low_complexity 1 25 0 207 285 125 21 chr17 54290018 54290162 -31148318 - MIR SINE MIR -2 260 102 310 276 20 134 chr17 54290419 54290673 -31147807 + MLT1J LTR MaLR 131 355 -156 5568 125 10 11 chr17 54291093 54291809 -31146671 - L1PA15 LINE L1 -6 6159 5443 1951 155 131 8 chr17 54291809 54292190 -31146290 - MSTA LTR MaLR 0 428 1 5568 125 10 11 chr17 54292190 54292343 -31146137 - L1PA15 LINE L1 -722 5443 5291 6412 183 18 42 chr17 54292443 54293932 -31144548 - L1P LINE L1 -766 5380 3928 2266 160 37 30 chr17 54294465 54294866 -31143614 - LTR57 LTR ERVL -7 404 1 5376 184 17 16 chr17 54294866 54295772 -31142708 - LTR57-int LTR ERVL 0 5343 4434 2150 138 0 0 chr17 54295772 54296076 -31142404 + AluSq SINE Alu 1 304 -9 5376 184 17 16 chr17 54296076 54296128 -31142352 - LTR57-int LTR ERVL -909 4434 4384 1217 177 0 0 chr17 54296124 54296316 -31142164 - LTR57-int LTR ERVL -3163 2180 1989 * 2134 136 6 6 chr17 54296317 54296678 -31141802 - LTR57-int LTR ERVL -3712 1631 1271 344 274 123 79 chr17 54296887 54297227 -31141253 - HAL1 LINE L1 -837 1670 1316 236 342 63 13 chr17 54298734 54298892 -31139588 + MIR SINE MIR 84 249 -13 212 297 99 33 chr17 54300624 54300715 -31137765 - L2 LINE L2 -27 3286 3190 440 286 69 23 chr17 54303063 54303238 -31135242 + MIR SINE MIR 28 210 -52 220 369 24 0 chr17 54303543 54303627 -31134853 - L2 LINE L2 -1 3271 3186 331 256 207 25 chr17 54303811 54304053 -31134427 - L2 LINE L2 -5 3308 3023 1999 109 14 7 chr17 54304316 54304616 -31133864 - AluSq SINE Alu 0 302 1 228 222 0 32 chr17 54304650 54304713 -31133767 + MIR SINE MIR 93 153 -109 459 267 100 80 chr17 54305658 54305909 -31132571 - MIR SINE MIR 0 262 7 2093 133 3 7 chr17 54306140 54306449 -31132031 + AluSp SINE Alu 3 310 -3 420 320 28 0 chr17 54306685 54306866 -31131614 + L1MC/D LINE L1 5584 5769 -2039 387 0 0 0 chr17 54307706 54307749 -31130731 + (TG)n Simple_repeat Simple_repeat 2 44 0 678 231 60 19 chr17 54307823 54308039 -31130441 - L1MD3 LINE L1 0 7995 7771 25 51 0 0 chr17 54308222 54308261 -31130219 + AT_rich Low_complexity Low_complexity 1 39 0 370 327 90 24 chr17 54308348 54308559 -31129921 - MIR SINE MIR -32 230 6 6897 64 28 0 chr17 54309923 54310796 -31127684 + MER11D LTR ERVK 1 897 0 646 266 71 36 chr17 54310953 54311261 -31127219 - LTR16A1 LTR ERVL 0 457 139 984 160 28 75 chr17 54311897 54312110 -31126370 + Tigger2a DNA MER2_type 1 203 -231 207 0 0 0 chr17 54312110 54312133 -31126347 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1247 94 0 64 chr17 54312133 54312336 -31126144 - L1PA8 LINE L1 -17 6155 5966 6128 83 9 14 chr17 54312440 54313990 -31124490 - L1PA8 LINE L1 -177 5995 4463 367 164 0 0 chr17 54313991 54314052 -31124428 - L1P3 LINE L1 -6395 66 6 1332 182 4 0 chr17 54314064 54314300 -31124180 + Tigger2a DNA MER2_type 208 444 0 762 281 88 11 chr17 54314465 54314818 -31123662 + L1ME4a LINE L1 5521 5900 -221 2664 224 128 39 chr17 54315566 54315988 -31122492 + L1M3 LINE L1 1231 1614 -4768 1501 177 4 19 chr17 54315988 54316253 -31122227 + AluJo SINE Alu 41 301 -11 2307 100 3 0 chr17 54316254 54316565 -31121915 + AluSp SINE Alu 1 312 -1 2664 224 128 39 chr17 54316565 54317648 -31120832 + L1M3 LINE L1 1613 2874 -3508 2599 193 49 61 chr17 54317680 54318567 -31119913 + L1M3 LINE L1 4791 5683 -721 613 264 0 0 chr17 54318577 54318702 -31119778 - MER52A LTR ERV1 -1630 125 1 535 189 4 0 chr17 54318702 54318817 -31119663 + L1MB2 LINE L1 6054 6144 -27 1434 147 0 9 chr17 54320825 54321050 -31117430 - AluSg/x SINE Alu -11 301 79 305 311 56 0 chr17 54321180 54321270 -31117210 + L2 LINE L2 3178 3272 0 21 36 0 0 chr17 54322089 54322117 -31116363 + AT_rich Low_complexity Low_complexity 1 28 0 457 289 125 10 chr17 54322567 54322906 -31115574 - L1ME LINE L1 -402 5719 5340 3120 172 69 14 chr17 54323278 54323871 -31114609 - LTR57-int LTR ERVL -4717 626 1 2245 183 30 0 chr17 54323871 54324270 -31114210 - LTR57 LTR ERVL 0 411 1 2242 70 37 7 chr17 54324579 54324879 -31113601 + AluY SINE Alu 1 309 -2 21 0 0 0 chr17 54324881 54324902 -31113578 + AT_rich Low_complexity Low_complexity 1 21 0 1077 322 20 38 chr17 54325787 54326234 -31112246 + L1M3a LINE L1 1542 1980 -5506 711 285 28 37 chr17 54326701 54327150 -31111330 + L1M3f LINE L1 535 1289 -4354 2715 113 0 0 chr17 54327150 54327523 -31110957 - THE1C LTR MaLR 0 375 3 9489 126 33 55 chr17 54327525 54329140 -31109340 - THE1C-int LTR MaLR 0 1580 1 2508 122 11 3 chr17 54329140 54329510 -31108970 - THE1C LTR MaLR -2 373 1 1238 271 19 12 chr17 54329510 54329997 -31108483 + L1M3a LINE L1 2207 2696 -4869 18950 181 36 17 chr17 54330098 54334301 -31104179 - L1 LINE L1 -3264 4301 15 756 313 25 12 chr17 54335039 54335282 -31103198 + MIR SINE MIR 3 248 -14 25 0 0 0 chr17 54335558 54335583 -31102897 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr17 54337534 54337555 -31100925 + AT_rich Low_complexity Low_complexity 1 21 0 251 250 0 16 chr17 54337736 54337800 -31100680 + GA-rich Low_complexity Low_complexity 2 64 0 22 0 0 0 chr17 54339120 54339142 -31099338 + AT_rich Low_complexity Low_complexity 1 22 0 370 364 56 15 chr17 54339457 54339652 -31098828 - MIR SINE MIR -46 216 14 1601 195 0 4 chr17 54341668 54341966 -31096514 - AluJb SINE Alu 0 309 13 1936 276 72 40 chr17 54343634 54344333 -31094147 - MER21B LTR ERV1 -124 739 19 26 30 0 0 chr17 54344530 54344563 -31093917 + AT_rich Low_complexity Low_complexity 1 33 0 2034 70 0 12 chr17 54344912 54345193 -31093287 + AluY SINE Alu 39 316 0 734 312 116 36 chr17 54345348 54345943 -31092537 + L2 LINE L2 2686 3313 0 340 282 93 37 chr17 54346099 54346591 -31091889 - L1 LINE L1 -1120 5026 4499 335 299 86 51 chr17 54346923 54347120 -31091360 - L1 LINE L1 -2127 4019 3816 1656 143 0 79 chr17 54347187 54347515 -31090965 - MER50 LTR ERV1 0 734 433 1268 149 36 9 chr17 54347512 54347733 -31090747 - MER50 LTR ERV1 -507 227 1 * 298 188 40 50 chr17 54348036 54348137 -31090343 + MER105 DNA DNA 59 158 -46 314 398 69 22 chr17 54348296 54348743 -31089737 - HAL1 LINE L1 -875 1632 1165 312 276 0 20 chr17 54348754 54348852 -31089628 + CT-rich Low_complexity Low_complexity 4 99 0 2779 101 0 0 chr17 54348911 54349286 -31089194 - THE1C LTR MaLR 0 375 1 8841 140 42 47 chr17 54349286 54350874 -31087606 - THE1C-int LTR MaLR 0 1580 1 2586 121 5 0 chr17 54350874 54351247 -31087233 - THE1C LTR MaLR 0 375 1 1762 191 0 3 chr17 54351298 54351586 -31086894 - AluSx SINE Alu -25 287 1 465 215 22 59 chr17 54351810 54351945 -31086535 - LTR9 LTR ERV1 -482 130 1 1125 206 32 18 chr17 54351945 54352206 -31086274 - HUERS-P3 LTR ERV1 0 8919 6828 2337 56 0 0 chr17 54352221 54352506 -31085974 + AluY SINE Alu 1 285 -26 1136 211 0 5 chr17 54353662 54353880 -31084600 - MLT1-int LTR MaLR -144 1227 1011 1988 168 54 0 chr17 54353975 54354363 -31084117 - L1MB1 LINE L1 -1 6167 5759 555 244 74 6 chr17 54355077 54355253 -31083227 - LTR41 LTR ERVL -585 188 1 505 191 104 40 chr17 54355255 54355428 -31083052 - L1MB1 LINE L1 -720 5446 5263 208 224 30 0 chr17 54355500 54355567 -31082913 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 761 270 62 7 chr17 54355570 54355859 -31082621 - L1MB1 LINE L1 -905 5241 4937 333 316 65 37 chr17 54355855 54356070 -31082410 + HAL1 LINE L1 1776 1996 -511 * 967 193 0 0 chr17 54356071 54356232 -31082248 + FRAM SINE Alu 5 165 -11 346 290 70 43 chr17 54356241 54356610 -31081870 + HAL1 LINE L1 1980 2358 -149 212 89 0 67 chr17 54356689 54356734 -31081746 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 249 136 23 0 chr17 54356750 54356794 -31081686 + MADE1 DNA Mariner 1 45 -35 2364 89 0 9 chr17 54358921 54359237 -31079243 + AluSq SINE Alu 1 313 0 11361 32 2 0 chr17 54359290 54360692 -31077788 - L1PA3 LINE L1 -2366 3780 2376 13016 37 1 0 chr17 54360692 54363048 -31075432 + L1PA3 LINE L1 3799 6155 0 1240 189 74 32 chr17 54363456 54363741 -31074739 + AluJo SINE Alu 1 297 -5 2030 180 15 0 chr17 54364342 54364737 -31073743 - L1MB1 LINE L1 -1 6167 5767 282 179 0 0 chr17 54364845 54364901 -31073579 + (TG)n Simple_repeat Simple_repeat 2 57 0 1744 206 46 8 chr17 54364962 54365355 -31073125 + L1M3 LINE L1 5260 5667 -501 363 269 142 14 chr17 54365615 54365756 -31072724 + MIR SINE MIR 92 250 -12 483 276 57 47 chr17 54366084 54366276 -31072204 - MLT1J LTR MaLR -317 194 1 270 0 0 0 chr17 54366325 54366355 -31072125 + (A)n Simple_repeat Simple_repeat 1 30 0 890 267 26 61 chr17 54366585 54367054 -31071426 - L2 LINE L2 -169 3144 2697 414 324 88 19 chr17 54367084 54367300 -31071180 - MIR SINE MIR -13 249 19 21 0 0 0 chr17 54367614 54367635 -31070845 + AT_rich Low_complexity Low_complexity 1 21 0 360 246 0 0 chr17 54367873 54367942 -31070538 - Zaphod DNA AcHobo -1 4030 3962 7272 126 23 2 chr17 54367944 54368996 -31069484 - HSMAR1 DNA Mariner -2 1285 212 729 54 0 0 chr17 54368996 54369088 -31069392 + AluY SINE Alu 1 92 -219 3656 187 33 15 chr17 54369232 54370014 -31068466 + L1PA16 LINE L1 5354 6149 -17 21 57 0 0 chr17 54370176 54370211 -31068269 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr17 54370242 54370273 -31068207 + AT_rich Low_complexity Low_complexity 1 31 0 464 132 13 0 chr17 54370598 54370674 -31067806 - L1MA2 LINE L1 -12 6292 6216 2117 88 0 14 chr17 54370891 54371176 -31067304 - AluY SINE Alu -30 281 1 1946 191 17 15 chr17 54371187 54371596 -31066884 - L1MC2 LINE L1 -1 6343 5934 6021 117 15 55 chr17 54371709 54372804 -31065676 - L1MA2 LINE L1 0 6304 5254 231 188 0 0 chr17 54372814 54372862 -31065618 + L1 LINE L1 4664 4711 -1435 1352 131 0 4 chr17 54372870 54373129 -31065351 - L1M1 LINE L1 -587 5597 5211 1003 212 29 34 chr17 54373128 54374327 -31064153 - L1M1 LINE L1 -6268 1297 6 * 301 247 82 12 chr17 54374407 54374492 -31063988 + HAL1 LINE L1 122 212 -2295 514 338 40 0 chr17 54374564 54374762 -31063718 + HAL1 LINE L1 450 655 -1852 383 225 53 46 chr17 54374760 54374911 -31063569 + HAL1 LINE L1 1082 1233 -1274 * 2458 111 36 0 chr17 54374922 54375284 -31063196 + THE1C LTR MaLR 1 375 0 304 342 9 0 chr17 54376514 54376625 -31061855 + MER81 DNA DNA 3 114 0 27 49 0 0 chr17 54376833 54376874 -31061606 + AT_rich Low_complexity Low_complexity 1 41 0 8874 237 75 24 chr17 54378103 54379847 -31058633 - L1PA16 LINE L1 0 7604 5951 1433 178 16 63 chr17 54379847 54380150 -31058330 - AluJo SINE Alu -19 293 5 8874 237 75 24 chr17 54380150 54380853 -31057627 - L1PA16 LINE L1 -1653 5951 5285 2464 114 0 3 chr17 54380853 54381222 -31057258 - L1PB1 LINE L1 -1 6150 5783 8874 237 75 24 chr17 54381222 54383158 -31055322 - L1PA16 LINE L1 -2319 5285 2993 423 325 6 6 chr17 54383192 54383349 -31055131 - L1PA16 LINE L1 -5307 2274 2118 1106 51 0 0 chr17 54383679 54383816 -31054664 + L1PA7 LINE L1 6017 6153 -1 314 252 95 78 chr17 54383948 54384026 -31054454 + L1MDb LINE L1 1342 1417 -5230 1878 140 55 3 chr17 54384026 54384318 -31054162 + AluSg SINE Alu 1 307 -3 314 252 95 78 chr17 54384318 54384481 -31053999 + L1MDb LINE L1 1417 1587 -5060 180 0 0 0 chr17 54384501 54384521 -31053959 + (TG)n Simple_repeat Simple_repeat 1 20 0 261 98 0 0 chr17 54384521 54384562 -31053918 + (GA)n Simple_repeat Simple_repeat 2 42 0 265 310 47 41 chr17 54384580 54384751 -31053729 + L1MDb LINE L1 1529 1700 -4842 2010 159 0 3 chr17 54384908 54385210 -31053270 + AluSp SINE Alu 1 301 -12 2258 105 0 7 chr17 54385547 54385851 -31052629 - AluSg1 SINE Alu -7 302 1 608 149 7 50 chr17 54386461 54386602 -31051878 + LTR36 LTR ERV1 1 135 -476 522 143 0 0 chr17 54386703 54386780 -31051700 + LTR36 LTR ERV1 535 611 0 859 130 8 24 chr17 54386884 54387053 -31051427 + LTR7 LTR ERV1 1 218 -232 870 166 88 49 chr17 54387235 54387440 -31051040 + LTR7 LTR ERV1 238 450 0 445 308 104 33 chr17 54387443 54388239 -31050241 - L1M4 LINE L1 -2446 3700 2848 333 72 6 0 chr17 54388258 54388308 -31050172 + MER4D LTR ERV1 167 329 -543 276 59 0 0 chr17 54388300 54388334 -31050146 - U2 snRNA snRNA -154 34 1 * 1942 175 195 17 chr17 54388335 54388816 -31049664 + LTR49 LTR ERV1 29 595 0 245 215 51 0 chr17 54389009 54389088 -31049392 + (TA)n Simple_repeat Simple_repeat 2 84 0 262 108 0 0 chr17 54389127 54389164 -31049316 - MER57B LTR ERV1 -66 368 332 592 71 0 81 chr17 54389320 54389419 -31049061 + L1PA3 LINE L1 6065 6155 0 1054 127 0 0 chr17 54389455 54389605 -31048875 + MER57B-int LTR ERV1 6999 7148 -389 656 146 23 31 chr17 54389605 54389735 -31048745 + LTR54B LTR ERV1 3 131 -367 1490 96 130 4 chr17 54389735 54389965 -31048515 + MER57B-int LTR ERV1 7279 7537 0 1532 118 0 0 chr17 54389965 54390176 -31048304 + MER57B LTR ERV1 1 211 -223 283 307 113 42 chr17 54390308 54390520 -31047960 - L1MEd LINE L1 -5581 538 312 405 39 0 0 chr17 54390571 54390622 -31047858 + (CA)n Simple_repeat Simple_repeat 2 52 0 238 242 30 0 chr17 54390706 54390805 -31047675 - L1MEd LINE L1 -5989 130 29 284 294 272 26 chr17 54390872 54391335 -31047145 + L2 LINE L2 1903 2479 -835 389 339 156 11 chr17 54392327 54392513 -31045967 + MIR SINE MIR 2 214 -48 21 36 0 0 chr17 54394624 54394652 -31043828 + AT_rich Low_complexity Low_complexity 1 28 0 1201 228 37 62 chr17 54394998 54395400 -31043080 - LTR10C LTR ERV1 0 562 188 198 143 0 0 chr17 54395420 54395455 -31043025 + (TA)n Simple_repeat Simple_repeat 1 35 0 260 261 83 83 chr17 54395935 54396165 -31042315 - L1M4 LINE L1 -1821 4325 4096 2011 111 0 13 chr17 54396918 54397216 -31041264 - AluY SINE Alu -1 310 17 275 54 0 0 chr17 54397216 54397253 -31041227 - AluY SINE Alu -262 38 2 299 342 60 33 chr17 54398208 54398392 -31040088 - MIR SINE MIR -18 244 56 1010 206 14 0 chr17 54399429 54399638 -31038842 + AluJo SINE Alu 98 309 -3 272 204 0 0 chr17 54399989 54400038 -31038442 + AluJ/monomer SINE Alu 243 291 -10 2219 128 0 0 chr17 54400170 54400474 -31038006 + AluSx SINE Alu 1 304 -8 2083 105 44 7 chr17 54400474 54400769 -31037711 + AluSg SINE Alu 1 306 -4 331 267 129 0 chr17 54401048 54401149 -31037331 - HAL1b LINE L1 -846 502 389 357 310 21 14 chr17 54401351 54401493 -31036987 + MER117 DNA MER1_type 4 146 -51 373 305 40 17 chr17 54401858 54402032 -31036448 - LTR33 LTR ERVL 0 521 344 407 306 31 16 chr17 54402297 54402552 -31035928 + L1M4 LINE L1 2110 2368 -3778 434 225 73 11 chr17 54402579 54402757 -31035723 + MER53 DNA DNA 1 189 0 37 23 0 0 chr17 54403631 54403675 -31034805 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr17 54403753 54403788 -31034692 + AT_rich Low_complexity Low_complexity 1 35 0 371 177 211 24 chr17 54403795 54404004 -31034476 - L1ME4a LINE L1 -43 6078 5831 251 291 0 13 chr17 54404161 54404240 -31034240 - L1ME4a LINE L1 -517 5604 5527 21 0 0 0 chr17 54404274 54404295 -31034185 + AT_rich Low_complexity Low_complexity 1 21 0 273 234 91 13 chr17 54404394 54404471 -31034009 + MER103 DNA DNA 18 100 -66 205 149 21 21 chr17 54404777 54404824 -31033656 + T-rich Low_complexity Low_complexity 5 51 0 359 295 116 13 chr17 54405811 54406035 -31032445 - L1M4c LINE L1 -4104 2280 2034 2427 157 45 0 chr17 54406079 54406549 -31031931 - L1MA8 LINE L1 -3 6288 5798 823 96 40 23 chr17 54407091 54407268 -31031212 + CT-rich Low_complexity Low_complexity 1 180 0 1058 122 0 6 chr17 54407268 54407440 -31031040 + (TTTC)n Simple_repeat Simple_repeat 4 174 0 1849 119 18 25 chr17 54407445 54407731 -31030749 - AluSg SINE Alu -26 284 1 360 338 53 7 chr17 54408017 54408168 -31030312 + MIR SINE MIR 22 179 -83 2867 13 0 0 chr17 54408575 54408886 -31029594 - AluYb8 SINE Alu -7 311 1 333 270 27 70 chr17 54409086 54409271 -31029209 + Charlie8 DNA MER1_type 88 264 -2153 21 36 0 0 chr17 54409862 54409890 -31028590 + AT_rich Low_complexity Low_complexity 1 28 0 250 389 8 16 chr17 54410792 54410918 -31027562 - L2 LINE L2 -1 3312 3188 311 299 42 18 chr17 54411085 54411214 -31027266 + MLT1J2 LTR MaLR 37 166 -243 23 0 0 0 chr17 54411778 54411801 -31026679 + AT_rich Low_complexity Low_complexity 1 23 0 220 171 0 0 chr17 54411828 54411863 -31026617 + (TG)n Simple_repeat Simple_repeat 2 36 0 837 331 104 23 chr17 54412190 54413033 -31025447 - L2 LINE L2 -2 3311 2398 1891 204 59 109 chr17 54413188 54413919 -31024561 + LTR8A LTR ERV1 34 727 0 1273 336 178 23 chr17 54413919 54414827 -31023653 - L2 LINE L2 -1007 2307 1157 2058 83 0 0 chr17 54414827 54415091 -31023389 - AluY SINE Alu -15 296 33 1273 336 178 23 chr17 54415091 54415412 -31023068 - L2 LINE L2 -2157 1157 887 442 268 124 55 chr17 54415483 54415837 -31022643 + MLT1J LTR MaLR 79 511 0 442 321 109 38 chr17 54415854 54416147 -31022333 - L2 LINE L2 -2444 870 557 2153 69 3 28 chr17 54416314 54416627 -31021853 + AluY SINE Alu 1 306 0 453 293 49 6 chr17 54416627 54416791 -31021689 + MIR SINE MIR 88 258 -4 577 121 0 0 chr17 54417209 54417300 -31021180 - AluSp/q SINE Alu 0 313 223 2103 141 0 3 chr17 54417407 54417720 -31020760 + AluSx SINE Alu 1 312 0 237 241 127 0 chr17 54418093 54418172 -31020308 + L1MC4a LINE L1 6196 6284 -1524 4220 206 45 46 chr17 54418279 54419899 -31018581 - L1MB3 LINE L1 -57 6126 4516 7206 39 6 1 chr17 54419904 54421538 -31016942 + L1PA5 LINE L1 4548 6150 -4 365 229 0 0 chr17 54421539 54421609 -31016871 + MER112 DNA MER1_type 186 255 -5 24 32 0 0 chr17 54421619 54421650 -31016830 + AT_rich Low_complexity Low_complexity 1 31 0 438 220 9 0 chr17 54421674 54421783 -31016697 - L1MB3 LINE L1 -1630 4516 4407 2012 169 30 50 chr17 54421787 54422226 -31016254 - L1MA9 LINE L1 -42 6270 5841 449 254 22 0 chr17 54422251 54422415 -31016065 - L1MEc LINE L1 -3804 2411 2260 287 130 0 0 chr17 54422523 54422569 -31015911 + L1P3 LINE L1 539 584 -5877 25 31 0 0 chr17 54422814 54422846 -31015634 + AT_rich Low_complexity Low_complexity 1 32 0 614 299 55 20 chr17 54422994 54423248 -31015232 - L1MEc LINE L1 -6099 297 35 10420 147 22 66 chr17 54423663 54426310 -31012170 + L1P3 LINE L1 10 2636 -3825 7110 57 2 0 chr17 54426338 54427843 -31010637 + L1PA5 LINE L1 4648 6154 0 5980 94 39 2 chr17 54427848 54428902 -31009578 + L1PA8 LINE L1 5072 6159 -13 30 45 0 0 chr17 54429005 54429049 -31009431 + AT_rich Low_complexity Low_complexity 1 44 0 2092 100 3 3 chr17 54429049 54429339 -31009141 - AluSc SINE Alu -19 290 1 218 160 20 0 chr17 54429681 54429731 -31008749 + GA-rich Low_complexity Low_complexity 6 56 0 728 240 47 108 chr17 54430496 54430858 -31007622 - MER102b DNA MER1_type 0 341 2 231 266 96 0 chr17 54431103 54431197 -31007283 + L1ME3 LINE L1 6040 6142 -20 252 59 0 0 chr17 54431210 54431244 -31007236 + (TAA)n Simple_repeat Simple_repeat 1 34 0 25 31 0 0 chr17 54431993 54432025 -31006455 + AT_rich Low_complexity Low_complexity 1 32 0 204 67 0 0 chr17 54432180 54432210 -31006270 + (A)n Simple_repeat Simple_repeat 1 30 0 552 262 18 0 chr17 54433130 54433298 -31005182 - L1MEc LINE L1 -5459 937 767 651 251 75 22 chr17 54433487 54433714 -31004766 - MIR SINE MIR 0 262 24 463 225 79 22 chr17 54433875 54434053 -31004427 - L1MD3 LINE L1 0 7995 7808 315 355 72 14 chr17 54434433 54434571 -31003909 + LTR33 LTR ERVL 47 192 -329 352 234 188 31 chr17 54434822 54435014 -31003466 + L1ME4a LINE L1 5634 5855 -266 403 301 30 60 chr17 54436086 54436252 -31002228 - MIR SINE MIR -81 181 21 289 288 37 43 chr17 54436779 54436942 -31001538 + LTR28 LTR ERV1 555 716 -304 * 2667 154 46 76 chr17 54436918 54437482 -31000998 + MER52A LTR ERV1 1209 1755 0 338 273 21 75 chr17 54437607 54437629 -31000851 + Charlie2 DNA MER1_type 197 219 -2563 402 57 0 0 chr17 54437629 54437682 -31000798 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 273 21 75 chr17 54437682 54437846 -31000634 + Charlie2 DNA MER1_type 219 373 -2409 399 278 83 13 chr17 54437964 54438148 -31000332 - L1MDa LINE L1 -2366 3849 3634 2052 137 0 0 chr17 54438148 54438441 -31000039 - AluSx SINE Alu -14 298 6 399 278 83 13 chr17 54438441 54438539 -30999941 - L1MDa LINE L1 -2581 3634 3544 25 0 0 0 chr17 54438590 54438615 -30999865 + AT_rich Low_complexity Low_complexity 1 25 0 262 229 142 10 chr17 54438665 54438870 -30999610 - L1MDa LINE L1 -2841 3374 3143 917 286 16 23 chr17 54439112 54439570 -30998910 - L1MDa LINE L1 -3593 2622 2167 238 236 164 9 chr17 54439916 54440026 -30998454 - L1MDa LINE L1 -4556 1659 1533 320 291 56 56 chr17 54440123 54440302 -30998178 - L1MDa LINE L1 -4937 1459 1281 841 196 21 102 chr17 54440950 54441105 -30997375 + MER20 DNA MER1_type 4 135 -84 1775 150 56 12 chr17 54441105 54441425 -30997055 - MER1B DNA MER1_type 0 337 4 841 196 21 102 chr17 54441425 54441504 -30996976 + MER20 DNA MER1_type 135 219 0 207 171 0 0 chr17 54441814 54441849 -30996631 + (TG)n Simple_repeat Simple_repeat 1 35 0 429 297 66 53 chr17 54442570 54443118 -30995362 - L1M4 LINE L1 -1544 4602 4048 580 294 25 45 chr17 54443288 54443533 -30994947 + L3 LINE CR1 1181 1420 -157 228 238 131 24 chr17 54444557 54444641 -30993839 - L2 LINE L2 -46 3267 3175 328 333 92 33 chr17 54444817 54445057 -30993423 + MIR SINE MIR 9 262 0 812 303 65 16 chr17 54445475 54445782 -30992698 + LTR16A LTR ERVL 125 446 -4 804 213 16 156 chr17 54445875 54446325 -30992155 + L1ME3A LINE L1 5775 6161 -9 4789 166 77 38 chr17 54446736 54447920 -30990560 + Tigger3b DNA MER2_type 1 1230 -1 328 202 20 111 chr17 54448088 54448187 -30990293 + MER21B LTR ERV1 1 90 -773 830 288 56 16 chr17 54448241 54448491 -30989989 + MER21B LTR ERV1 94 353 -510 588 241 18 35 chr17 54448592 54448762 -30989718 + MLT1A1 LTR MaLR 187 353 -12 1440 170 44 22 chr17 54449380 54449698 -30988782 + L1MB7 LINE L1 5841 6165 -19 233 221 73 15 chr17 54450815 54450883 -30987597 + MIR SINE MIR 183 254 -8 235 306 71 10 chr17 54450992 54451090 -30987390 - MIR SINE MIR -73 189 86 2082 148 47 5 chr17 54452007 54452392 -30986088 + MER57A LTR ERV1 3 403 0 1956 138 10 3 chr17 54452639 54452937 -30985543 + AluSx SINE Alu 1 300 -12 185 0 40 0 chr17 54452996 54453021 -30985459 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 2902 196 93 50 chr17 54453301 54454197 -30984283 + MER52A LTR ERV1 1 1149 -606 348 320 174 30 chr17 54454331 54454693 -30983787 + L2 LINE L2 2898 3311 -2 340 328 63 84 chr17 54455249 54455679 -30982801 + MLT1H1 LTR MaLR 112 532 -23 460 194 7 83 chr17 54457401 54457545 -30980935 + L1MC5 LINE L1 6941 7073 -888 2556 141 26 35 chr17 54457545 54458148 -30980332 - MER4E LTR ERV1 0 779 1 449 189 4 20 chr17 54458187 54458300 -30980180 + L1MC5 LINE L1 7129 7228 -733 241 372 13 51 chr17 54458555 54458711 -30979769 - MLT1I LTR MaLR -162 247 98 722 251 104 58 chr17 54458921 54459460 -30979020 + L1MC5 LINE L1 7337 7900 -61 323 292 26 18 chr17 54460747 54460860 -30977620 + MIR SINE MIR 76 189 -73 2343 70 10 0 chr17 54462085 54462387 -30976093 + AluY SINE Alu 1 305 -6 331 213 13 20 chr17 54462774 54462851 -30975629 + (TA)n Simple_repeat Simple_repeat 2 79 -71 2057 132 3 0 chr17 54462851 54463139 -30975341 + AluSx SINE Alu 1 289 -23 331 213 13 20 chr17 54463139 54463211 -30975269 + (TA)n Simple_repeat Simple_repeat 79 150 0 8776 28 11 3 chr17 54463291 54465133 -30973347 - L1PA3 LINE L1 0 6155 4307 12911 31 0 0 chr17 54465133 54466696 -30971784 + L1PA3 LINE L1 2741 4303 -1843 359 194 11 0 chr17 54466696 54466789 -30971691 + (TA)n Simple_repeat Simple_repeat 1 94 0 288 111 0 0 chr17 54466831 54466876 -30971604 + (TC)n Simple_repeat Simple_repeat 2 46 0 243 259 74 0 chr17 54467197 54467251 -30971229 + L2 LINE L2 3254 3311 -2 201 39 0 0 chr17 54467471 54467497 -30970983 + (CATA)n Simple_repeat Simple_repeat 4 29 0 213 39 0 0 chr17 54467560 54467586 -30970894 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2074 110 0 0 chr17 54468419 54468692 -30969788 + AluSg SINE Alu 1 273 -37 747 267 36 41 chr17 54468748 54468969 -30969511 - MIR SINE MIR 0 262 43 344 340 63 46 chr17 54469010 54469295 -30969185 - L2 LINE L2 -342 2972 2683 229 289 13 26 chr17 54470246 54470322 -30968158 - MIR3 SINE MIR 0 208 134 * 491 272 24 35 chr17 54470305 54470474 -30968006 - MER5B DNA MER1_type -5 173 7 222 271 24 71 chr17 54470479 54470564 -30967916 - L3 LINE CR1 -44 1533 1453 219 218 0 0 chr17 54470637 54470692 -30967788 + (TG)n Simple_repeat Simple_repeat 2 56 0 285 401 21 14 chr17 54470713 54470855 -30967625 + L2 LINE L2 3123 3265 -7 247 314 105 0 chr17 54471235 54471359 -30967121 - L3 LINE CR1 -266 1311 1175 876 220 16 5 chr17 54473177 54473363 -30965117 + MER5A DNA MER1_type 2 189 0 219 69 0 0 chr17 54473649 54473678 -30964802 + (A)n Simple_repeat Simple_repeat 1 29 0 724 175 0 28 chr17 54474302 54474445 -30964035 + FLAM_C SINE Alu 5 143 0 696 253 20 0 chr17 54474456 54474606 -30963874 + AluJo SINE Alu 118 270 -42 189 0 0 0 chr17 54478070 54478091 -30960389 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr17 54478580 54478601 -30959879 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr17 54479017 54479048 -30959432 + AT_rich Low_complexity Low_complexity 1 31 0 248 372 25 18 chr17 54479853 54479971 -30958509 + MIR SINE MIR 5 122 -95 5636 109 14 43 chr17 54480524 54481713 -30956767 - L1PA13 LINE L1 0 6163 4966 2178 103 0 3 chr17 54481737 54482019 -30956461 - AluSp SINE Alu -32 281 1 4840 176 8 6 chr17 54482052 54482947 -30955533 - L1PA13 LINE L1 -1167 4979 4083 317 287 176 0 chr17 54483773 54483881 -30954599 + L2 LINE L2 3182 3308 -5 269 359 14 58 chr17 54483939 54484287 -30954193 - L2 LINE L2 -1156 2158 1826 199 353 59 12 chr17 54485632 54485717 -30952763 + MIR SINE MIR 53 141 -67 384 356 10 16 chr17 54485778 54486053 -30952427 + L1MC/D LINE L1 5440 5710 -531 21 71 0 0 chr17 54486530 54486572 -30951908 + AT_rich Low_complexity Low_complexity 1 42 0 436 165 12 24 chr17 54486635 54486720 -30951760 - LTR27-int LTR ERV1 -995 6423 6340 8227 131 30 40 chr17 54486721 54487268 -30951212 - LTR27-int LTR ERV1 -717 5229 4678 2032 146 7 0 chr17 54487268 54487576 -30950904 + AluSg SINE Alu 1 310 0 8227 131 30 40 chr17 54487576 54488581 -30949899 - LTR27-int LTR ERV1 -1268 4678 3693 39 0 0 0 chr17 54488581 54488620 -30949860 + AT_rich Low_complexity Low_complexity 1 39 0 208 147 0 0 chr17 54488637 54488671 -30949809 + (TTATA)n Simple_repeat Simple_repeat 4 37 0 308 190 0 0 chr17 54488671 54488729 -30949751 - LTR27-int LTR ERV1 -3179 4358 4301 5268 29 3 0 chr17 54488760 54489382 -30949098 - L1PA3 LINE L1 0 6155 5532 6274 32 0 0 chr17 54489382 54490132 -30948348 + L1P LINE L1 4032 4781 -1365 5883 142 50 111 chr17 54490133 54491595 -30946885 - LTR27-int LTR ERV1 -2984 2233 861 313 187 178 19 chr17 54491586 54491693 -30946787 - LTR27-int LTR ERV1 -6585 506 383 * 319 252 73 34 chr17 54491661 54491863 -30946617 - LTR27-int LTR ERV1 -6837 254 39 602 200 14 43 chr17 54491894 54492034 -30946446 - LTR27 LTR ERV1 -1 635 500 677 253 20 29 chr17 54492073 54492306 -30946174 - LTR28 LTR ERV1 -138 498 318 1883 214 26 48 chr17 54493651 54494146 -30944334 - MLT1D LTR MaLR -10 495 12 268 252 7 7 chr17 54494171 54494306 -30944174 + (TA)n Simple_repeat Simple_repeat 2 136 0 255 79 0 0 chr17 54495218 54495256 -30943224 + (CA)n Simple_repeat Simple_repeat 2 39 0 2154 99 14 0 chr17 54495321 54495615 -30942865 + AluSq SINE Alu 1 298 -15 202 347 17 110 chr17 54495635 54495808 -30942672 + L2 LINE L2 3028 3184 -88 21 57 0 0 chr17 54497282 54497317 -30941163 + AT_rich Low_complexity Low_complexity 1 35 0 205 349 21 21 chr17 54497807 54497936 -30940544 - MIR SINE MIR -58 150 20 493 266 52 99 chr17 54498109 54498361 -30940119 - MER102a DNA MER1_type 0 330 91 1120 52 35 6 chr17 54498424 54498596 -30939884 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 264 122 0 0 chr17 54498865 54498906 -30939574 + (TG)n Simple_repeat Simple_repeat 2 42 0 25237 145 15 20 chr17 54499112 54504467 -30934013 + L1PA8A LINE L1 573 5957 -489 3925 174 91 42 chr17 54504467 54505488 -30932992 + MER11C LTR ERVK 1 1071 0 25237 145 15 20 chr17 54505488 54505963 -30932517 + L1PA8A LINE L1 5957 6433 -13 216 97 0 0 chr17 54506119 54506150 -30932330 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 21 57 0 0 chr17 54507074 54507109 -30931371 + AT_rich Low_complexity Low_complexity 1 35 0 183 321 0 0 chr17 54507306 54507359 -30931121 - L2 LINE L2 -15 3257 3205 1985 139 67 9 chr17 54509200 54509544 -30928936 + THE1B LTR MaLR 1 364 0 199 306 20 0 chr17 54509687 54509736 -30928744 + L2 LINE L2 3259 3308 -5 735 256 56 14 chr17 54509956 54510171 -30928309 - MER58A DNA MER1_type 0 224 1 345 386 51 6 chr17 54510258 54510416 -30928064 - L2 LINE L2 -4 3268 3104 1742 155 7 0 chr17 54510439 54510716 -30927764 - L1PB4 LINE L1 -83 6073 5795 344 230 10 0 chr17 54510733 54510833 -30927647 + (TA)n Simple_repeat Simple_repeat 1 101 0 2868 154 47 6 chr17 54510906 54511464 -30927016 - L1PB4 LINE L1 -361 5795 5216 1260 118 43 0 chr17 54511464 54511651 -30926829 + AluSg SINE Alu 1 195 -115 222 118 0 0 chr17 54511653 54511687 -30926793 + (A)n Simple_repeat Simple_repeat 1 34 0 23 78 0 0 chr17 54511882 54511933 -30926547 + AT_rich Low_complexity Low_complexity 1 51 0 254 320 51 39 chr17 54512104 54512338 -30926142 + Charlie8 DNA MER1_type 3 239 -2178 426 211 53 44 chr17 54512357 54512471 -30926009 + MER5B DNA MER1_type 2 116 -62 1969 205 54 2 chr17 54512471 54512876 -30925604 - MSTB LTR MaLR 0 426 1 4721 198 33 11 chr17 54512876 54513789 -30924691 - MSTB-int LTR MaLR 0 1651 719 252 146 0 0 chr17 54513789 54513830 -30924650 - MSTB LTR MaLR -385 41 1 1387 236 75 9 chr17 54513861 54514196 -30924284 + L1MDa LINE L1 19 375 -6165 464 213 33 2 chr17 54514308 54514442 -30924038 + L1 LINE L1 5089 5223 -923 2029 101 4 4 chr17 54514456 54514734 -30923746 - AluSc SINE Alu -31 278 1 22 0 0 0 chr17 54514859 54514881 -30923599 + AT_rich Low_complexity Low_complexity 1 22 0 268 274 9 28 chr17 54515070 54515176 -30923304 + (CATATA)n Simple_repeat Simple_repeat 2 105 0 214 322 11 23 chr17 54515581 54515668 -30922812 + L3 LINE CR1 1155 1240 -337 714 324 33 50 chr17 54516373 54516567 -30921913 + L1MC/D LINE L1 4285 4481 -1665 1653 191 0 0 chr17 54516567 54516890 -30921590 - AluJb SINE Alu 0 323 1 714 324 33 50 chr17 54516890 54517394 -30921086 + L1MC/D LINE L1 4481 4972 -1174 50 18 0 0 chr17 54517417 54517474 -30921006 + AT_rich Low_complexity Low_complexity 1 57 0 452 294 133 0 chr17 54517638 54517893 -30920587 + L1MC/D LINE L1 5297 5585 -774 23 78 0 0 chr17 54518034 54518085 -30920395 + AT_rich Low_complexity Low_complexity 1 51 0 272 279 39 78 chr17 54518392 54518546 -30919934 - L2 LINE L2 -47 3266 3119 251 253 50 0 chr17 54518601 54518700 -30919780 + (TATATG)n Simple_repeat Simple_repeat 3 106 0 31 0 0 0 chr17 54518780 54518811 -30919669 + AT_rich Low_complexity Low_complexity 1 31 0 1332 261 171 17 chr17 54519064 54519655 -30918825 + LTR50 LTR ERVL 15 696 -99 495 352 56 6 chr17 54519787 54519949 -30918531 - L2 LINE L2 -1 3271 3102 3576 37 1 0 chr17 54520294 54520917 -30917563 - L1P2 LINE L1 -580 5574 4951 1119 70 7 0 chr17 54520910 54521053 -30917427 + L1P2 LINE L1 5554 5697 -457 * 2010 120 43 0 chr17 54521374 54521674 -30916806 + AluSp SINE Alu 1 313 0 7446 188 17 5 chr17 54521730 54523366 -30915114 + L1PA15 LINE L1 3842 5493 -668 354 100 0 0 chr17 54523366 54523416 -30915064 - MLT2A1 LTR ERVL 0 444 395 2729 89 30 8 chr17 54523461 54523855 -30914625 - MLT2A1 LTR ERVL -41 403 1 1306 103 0 54 chr17 54523856 54523982 -30914498 + L1PA15 LINE L1 5490 5602 -563 2058 133 17 0 chr17 54523982 54524284 -30914196 + AluSq SINE Alu 1 307 -6 1306 103 0 54 chr17 54524284 54524361 -30914119 + L1PA15 LINE L1 5602 5682 -483 1007 139 29 12 chr17 54524461 54524634 -30913846 + L1PA15 LINE L1 5981 6156 -9 556 231 151 50 chr17 54524868 54525067 -30913413 + MER20 DNA MER1_type 1 219 0 937 254 0 35 chr17 54525166 54525449 -30913031 + L1MB1 LINE L1 1751 2023 -5007 2959 227 73 17 chr17 54525456 54526355 -30912125 + L1MB1 LINE L1 4017 4966 -2140 12225 160 17 6 chr17 54526358 54528097 -30910383 - Tigger1 DNA MER2_type -1 2417 651 2178 177 31 19 chr17 54528097 54528520 -30909960 - MSTA LTR MaLR 0 428 1 12225 160 17 6 chr17 54528520 54528873 -30909607 - Tigger1 DNA MER2_type -1767 651 303 449 239 101 0 chr17 54528973 54529082 -30909398 + FRAM SINE Alu 29 148 -28 887 195 4 44 chr17 54529082 54529308 -30909172 + L1MA10 LINE L1 6115 6331 -3 189 0 0 0 chr17 54531221 54531242 -30907238 + (TAA)n Simple_repeat Simple_repeat 1 21 0 2201 121 0 0 chr17 54531735 54532041 -30906439 - AluSx SINE Alu -6 306 1 253 75 0 0 chr17 54532062 54532102 -30906378 - L1PA14 LINE L1 -15 6146 6107 1403 215 31 12 chr17 54532203 54532524 -30905956 - Tigger1 DNA MER2_type -2091 327 1 5556 199 52 7 chr17 54532525 54532763 -30905717 + L1MB1 LINE L1 4968 5194 -1949 426 20 0 0 chr17 54532763 54532814 -30905666 + (CA)n Simple_repeat Simple_repeat 2 52 0 5556 199 52 7 chr17 54532814 54533355 -30905125 + L1MB1 LINE L1 5194 5709 -1434 965 242 58 0 chr17 54533355 54533578 -30904902 + MER46A DNA MER2_type 1 236 0 5556 199 52 7 chr17 54533578 54534362 -30904118 + L1MB1 LINE L1 5709 6607 -536 2742 216 6 4 chr17 54534375 54534917 -30903563 - MER44D DNA MER2_type -7 598 1 1657 228 28 0 chr17 54534917 54535307 -30903173 + L1MB1 LINE L1 6605 7005 -144 2201 109 0 3 chr17 54535773 54536076 -30902404 - AluSg SINE Alu -6 304 3 316 231 66 11 chr17 54536288 54536379 -30902101 - L1MC4 LINE L1 -1350 6692 6597 302 123 18 0 chr17 54536400 54536457 -30902023 + (TA)n Simple_repeat Simple_repeat 2 59 0 23 54 0 0 chr17 54536841 54536878 -30901602 + AT_rich Low_complexity Low_complexity 1 37 0 2080 181 23 3 chr17 54536889 54537275 -30901205 - L1 LINE L1 -1874 4272 3879 1967 160 123 8 chr17 54537276 54537657 -30900823 + MSTA LTR MaLR 1 425 -3 3366 172 47 0 chr17 54537659 54538274 -30900206 + MSTA-int LTR MaLR 1 644 -1007 248 186 0 0 chr17 54538280 54538323 -30900157 + MSTA LTR MaLR 386 428 0 1952 200 24 7 chr17 54538323 54538743 -30899737 - L1 LINE L1 -2264 3882 3456 14042 101 21 1 chr17 54538750 54541644 -30896836 + L1PA7 LINE L1 3231 6162 0 512 304 121 14 chr17 54542126 54542333 -30896147 + MER102a DNA MER1_type 102 330 0 405 0 0 0 chr17 54544636 54544681 -30893799 + (CA)n Simple_repeat Simple_repeat 2 46 0 444 295 155 14 chr17 54544699 54544906 -30893574 + MIR SINE MIR 7 242 -20 40 59 0 0 chr17 54546164 54546232 -30892248 + AT_rich Low_complexity Low_complexity 1 68 0 26 30 0 0 chr17 54546569 54546602 -30891878 + AT_rich Low_complexity Low_complexity 1 33 0 462 79 0 0 chr17 54547213 54547276 -30891204 + (TG)n Simple_repeat Simple_repeat 2 64 0 273 241 21 145 chr17 54547558 54547703 -30890777 - L2 LINE L2 -221 3051 2925 320 297 23 62 chr17 54548147 54548275 -30890205 - L2 LINE L2 -5 3267 3145 352 319 89 39 chr17 54548513 54548770 -30889710 - L2 LINE L2 -440 2874 2605 398 326 34 22 chr17 54548907 54549085 -30889395 + MLT1K LTR MaLR 173 352 -236 806 207 70 18 chr17 54549142 54549369 -30889111 + MER96B DNA MER1_type? 169 407 -10 659 161 32 7 chr17 54549926 54550081 -30888399 + CT-rich Low_complexity Low_complexity 2 160 0 399 393 16 16 chr17 54550142 54550325 -30888155 + LTR67 LTR ERVL 113 295 -262 778 230 0 0 chr17 54550344 54550496 -30887984 + MLT1E1 LTR MaLR 499 650 -4 273 304 65 0 chr17 54550822 54550914 -30887566 + MIR SINE MIR 63 160 -102 22040 31 0 7 chr17 54550917 54553636 -30884844 + L1PA4 LINE L1 1971 4672 -1474 7274 30 10 8 chr17 54553736 54555164 -30883316 + L1PA4 LINE L1 4723 6152 -3 372 97 0 0 chr17 54555502 54555564 -30882916 + (CA)n Simple_repeat Simple_repeat 1 62 0 30 27 0 0 chr17 54555601 54555638 -30882842 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr17 54556066 54556088 -30882392 + (CA)n Simple_repeat Simple_repeat 2 23 0 211 377 68 27 chr17 54556565 54556711 -30881769 - MIR SINE MIR -108 154 3 215 313 116 27 chr17 54557612 54557759 -30880721 - L2 LINE L2 0 3313 3154 216 326 0 22 chr17 54558028 54558117 -30880363 - L2 LINE L2 -452 2862 2776 1342 159 14 75 chr17 54558163 54558458 -30880022 + AluJb SINE Alu 21 297 -15 187 384 24 32 chr17 54558721 54558846 -30879634 - MIR SINE MIR -66 142 19 409 344 21 16 chr17 54559885 54560077 -30878403 - L2 LINE L2 -4 3309 3117 1877 222 43 51 chr17 54560077 54560586 -30877894 + MLT1D LTR MaLR 1 505 0 451 129 0 0 chr17 54560702 54560787 -30877693 + L1MA7 LINE L1 6207 6291 0 266 325 40 78 chr17 54560792 54561106 -30877374 + L2 LINE L2 2736 3042 -230 235 212 106 0 chr17 54661832 54661898 -30776582 + AluS SINE Alu 18 90 -212 1734 292 46 22 chr17 54663354 54664142 -30774338 + L1 LINE L1 3466 4272 -1874 336 48 0 0 chr17 54664413 54664455 -30774025 + (TCTCCC)n Simple_repeat Simple_repeat 5 46 0 343 283 26 26 chr17 54664987 54665100 -30773380 + MIR SINE MIR 28 140 -122 294 115 0 0 chr17 54665856 54665908 -30772572 + (CA)n Simple_repeat Simple_repeat 1 52 0 516 32 0 0 chr17 54665909 54665971 -30772509 + (TC)n Simple_repeat Simple_repeat 1 62 0 372 77 19 0 chr17 54667042 54667094 -30771386 - PMER1 DNA MER1_type -37 53 1 266 147 132 15 chr17 54667763 54667831 -30770649 - L1ME2 LINE L1 -11 6153 6078 436 269 102 11 chr17 54668743 54668929 -30769551 + L1MA6 LINE L1 6071 6273 -27 271 250 24 0 chr17 54668958 54669042 -30769438 + L1M4c LINE L1 1314 1399 -4985 226 325 16 32 chr17 54669244 54669370 -30769110 + GA-rich Low_complexity Low_complexity 4 127 0 815 207 75 88 chr17 54669373 54669515 -30768965 + AluJo SINE Alu 2 144 -158 576 0 0 0 chr17 54669515 54669579 -30768901 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 815 207 75 88 chr17 54669579 54669741 -30768739 + AluJo SINE Alu 144 302 0 235 123 88 88 chr17 54669810 54669867 -30768613 + tRNA-Thr-ACA tRNA tRNA 7 63 -13 27 29 0 0 chr17 54669957 54669991 -30768489 + AT_rich Low_complexity Low_complexity 1 34 0 249 33 0 0 chr17 54670215 54670245 -30768235 + (CA)n Simple_repeat Simple_repeat 1 30 0 330 224 31 20 chr17 54670350 54670448 -30768032 + L1M4c LINE L1 1595 1693 -4691 503 185 96 25 chr17 54670967 54671124 -30767356 - FRAM SINE Alu -10 166 1 21 36 0 0 chr17 54671228 54671256 -30767224 + AT_rich Low_complexity Low_complexity 1 28 0 289 160 0 0 chr17 54671594 54671644 -30766836 - PMER1 DNA MER1_type -37 53 4 699 35 0 0 chr17 54671651 54671737 -30766743 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 342 265 86 0 chr17 54672286 54672403 -30766077 + MLT1B LTR MaLR 3 129 -261 275 325 57 0 chr17 54672456 54672579 -30765901 + MLT1B LTR MaLR 285 414 -53 317 326 21 7 chr17 54672927 54673071 -30765409 + (CA)n Simple_repeat Simple_repeat 1 146 0 29 47 0 0 chr17 54674776 54674819 -30763661 + AT_rich Low_complexity Low_complexity 1 43 0 288 0 0 0 chr17 54675204 54675236 -30763244 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 276 231 100 0 chr17 54675281 54675385 -30763095 - AluS SINE Alu -203 99 1 670 201 140 0 chr17 54675387 54675551 -30762929 - L1MA7 LINE L1 -420 5871 5685 253 209 45 0 chr17 54675703 54675770 -30762710 + FRAM/FAM SINE Alu 1 68 -98 183 281 232 12 chr17 54675830 54675912 -30762568 - MIR SINE MIR -62 200 101 325 265 40 53 chr17 54675974 54676125 -30762355 - L2 LINE L2 -198 3074 2926 263 292 15 0 chr17 54676296 54676361 -30762119 + polypyrimidine Low_complexity Low_complexity 1 66 0 244 273 0 0 chr17 54676370 54676425 -30762055 - tRNA-Ala-GCG tRNA tRNA -16 59 5 345 24 0 0 chr17 54676598 54676640 -30761840 + (CA)n Simple_repeat Simple_repeat 2 43 0 296 325 8 8 chr17 54677079 54677199 -30761281 - MER84-int LTR ERV1 -3086 1868 1749 305 323 89 0 chr17 54677458 54677616 -30760864 - MER84-int LTR ERV1 -3586 1368 1197 216 196 20 0 chr17 54677682 54677733 -30760747 + GA-rich Low_complexity Low_complexity 2 53 0 481 240 2 30 chr17 54679159 54679304 -30759176 - L1 LINE L1 -1433 4713 4570 323 292 155 15 chr17 54679324 54679588 -30758892 - L1 LINE L1 -1957 4189 3889 562 302 32 61 chr17 54679592 54679870 -30758610 - L1 LINE L1 -3085 3061 2792 329 217 43 87 chr17 54679878 54680039 -30758441 - L1 LINE L1 -3451 2695 2542 207 293 49 37 chr17 54681057 54681139 -30757341 + L2 LINE L2 3008 3090 -182 25 31 0 0 chr17 54684525 54684557 -30753923 + AT_rich Low_complexity Low_complexity 1 32 0 203 252 252 0 chr17 54686077 54686196 -30752284 + MIR SINE MIR 77 225 -37 252 143 0 0 chr17 54688318 54688360 -30750120 + (CCCCCA)n Simple_repeat Simple_repeat 6 47 0 273 156 156 0 chr17 54688366 54688430 -30750050 - AluS SINE Alu -204 99 26 203 150 33 50 chr17 54693503 54693563 -30744917 + T-rich Low_complexity Low_complexity 6 64 0 30 45 0 0 chr17 54693731 54693775 -30744705 + AT_rich Low_complexity Low_complexity 1 44 0 478 152 138 51 chr17 54694989 54695181 -30743299 - FRAM SINE Alu 0 203 1 236 268 0 12 chr17 54696205 54696287 -30742193 + T-rich Low_complexity Low_complexity 4 84 0 305 261 58 0 chr17 54697340 54697450 -30741030 - FLAM_C SINE Alu -27 106 2 357 229 85 85 chr17 54697450 54697603 -30740877 - L1M4 LINE L1 -3207 2939 2787 237 33 0 0 chr17 54700530 54700560 -30737920 + (CA)n Simple_repeat Simple_repeat 2 31 0 351 0 0 0 chr17 54702463 54702502 -30735978 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 495 0 0 0 chr17 54703526 54703581 -30734899 + (TTTTG)n Simple_repeat Simple_repeat 3 57 0 320 218 60 10 chr17 54703638 54703735 -30734745 - AluJo SINE Alu -92 210 119 195 288 82 14 chr17 54706383 54706456 -30732024 - MIR SINE MIR -165 97 20 216 0 0 0 chr17 54707955 54707979 -30730501 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 274 173 253 0 chr17 54708840 54708915 -30729565 + AluSg SINE Alu 10 103 -197 183 42 0 0 chr17 54708954 54708978 -30729502 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 435 83 0 0 chr17 54709702 54709762 -30728718 + (TG)n Simple_repeat Simple_repeat 1 60 0 261 0 0 0 chr17 54713181 54713210 -30725270 + (GA)n Simple_repeat Simple_repeat 2 30 0 378 0 0 0 chr17 54714055 54714097 -30724383 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr17 54715147 54715197 -30723283 + (CA)n Simple_repeat Simple_repeat 1 50 0 772 317 127 31 chr17 54716424 54717005 -30721475 + L1M2 LINE L1 1791 2427 -4422 578 256 11 6 chr17 54717158 54717358 -30721122 + L1MA4A LINE L1 5758 5957 -206 499 210 77 62 chr17 54720110 54720305 -30718175 - AluJo SINE Alu 0 312 115 21 95 0 0 chr17 54720776 54720839 -30717641 + AT_rich Low_complexity Low_complexity 1 63 0 240 208 0 0 chr17 54721089 54721137 -30717343 + (CA)n Simple_repeat Simple_repeat 1 48 0 313 164 94 7 chr17 54721378 54721479 -30717001 - AluJ/FLAM SINE Alu -209 93 13 539 201 65 47 chr17 54722973 54723142 -30715338 + FRAM SINE Alu 1 171 -5 40 21 0 0 chr17 54723618 54723665 -30714815 + AT_rich Low_complexity Low_complexity 1 47 0 330 234 87 16 chr17 54723750 54723911 -30714569 + AluSg SINE Alu 12 97 -203 606 63 0 0 chr17 54724022 54724101 -30714379 + (TA)n Simple_repeat Simple_repeat 1 79 0 528 195 83 35 chr17 54724166 54724335 -30714145 - AluJb SINE Alu 0 312 136 334 167 22 138 chr17 54724509 54724647 -30713833 - AluSq/x SINE Alu -170 132 11 767 292 89 55 chr17 54725333 54725881 -30712599 - L1MB7 LINE L1 -76 6344 5778 265 242 68 15 chr17 54725955 54726087 -30712393 - L1MB7 LINE L1 -744 5670 5532 297 214 96 79 chr17 54726952 54727130 -30711350 - AluSg SINE Alu -203 97 1 604 290 89 42 chr17 54727239 54727795 -30710685 - L1MB7 LINE L1 -1232 5150 4560 332 88 18 0 chr17 54727839 54727896 -30710584 + (TATG)n Simple_repeat Simple_repeat 4 61 0 413 298 85 32 chr17 54728121 54728403 -30710077 - L1MB7 LINE L1 -2192 4190 3894 277 228 99 10 chr17 54728515 54728616 -30709864 - AluJ SINE Alu -191 111 2 397 288 147 28 chr17 54728758 54728935 -30709545 - L1MB7 LINE L1 -3901 2483 2286 454 312 58 58 chr17 54729088 54729380 -30709100 - L1MB7 LINE L1 -4159 2225 1934 680 200 7 0 chr17 54729650 54729805 -30708675 + (CA)n Simple_repeat Simple_repeat 2 157 0 288 77 0 0 chr17 54729805 54729844 -30708636 + (ATTG)n Simple_repeat Simple_repeat 2 40 0 228 264 7 104 chr17 54729850 54729994 -30708486 + FLAM_C SINE Alu 3 132 -1 225 0 0 0 chr17 54731377 54731402 -30707078 + (TC)n Simple_repeat Simple_repeat 2 26 0 996 127 6 11 chr17 54731413 54731594 -30706886 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 259 163 0 20 chr17 54731911 54731960 -30706520 + L1MA6 LINE L1 6146 6193 -107 229 204 0 0 chr17 54732579 54732633 -30705847 + (TA)n Simple_repeat Simple_repeat 2 55 0 234 0 0 0 chr17 54732654 54732680 -30705800 + (TG)n Simple_repeat Simple_repeat 1 26 0 187 212 30 61 chr17 54734753 54734819 -30703661 + L2 LINE L2 362 425 -2889 387 0 0 0 chr17 54734865 54734908 -30703572 + (TC)n Simple_repeat Simple_repeat 2 44 0 496 256 205 11 chr17 54736218 54736532 -30701948 + L1M2 LINE L1 5270 5643 -660 373 262 48 0 chr17 54736877 54737003 -30701477 + L1M2 LINE L1 5641 5772 -528 384 22 0 0 chr17 54737103 54737148 -30701332 + (TCTCCC)n Simple_repeat Simple_repeat 3 47 0 919 237 114 0 chr17 54737455 54737788 -30700692 + L1MA4 LINE L1 4266 4636 -1510 1290 292 118 20 chr17 54738314 54739530 -30698950 + L1MA4 LINE L1 4590 5930 -370 207 0 0 0 chr17 54742335 54742358 -30696122 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 400 260 82 41 chr17 54742595 54742791 -30695689 + MLT1A2 LTR MaLR 171 374 0 279 0 0 0 chr17 54744186 54744217 -30694263 + (TCTCC)n Simple_repeat Simple_repeat 3 33 0 249 304 0 14 chr17 54744218 54744287 -30694193 + CT-rich Low_complexity Low_complexity 2 69 0 234 295 0 0 chr17 54744950 54745011 -30693469 + tRNA-Ala-GCG tRNA tRNA 1 61 -14 250 173 0 19 chr17 54746028 54746080 -30692400 - MLT1B LTR MaLR -45 345 295 264 59 0 0 chr17 54748358 54748392 -30690088 + (GA)n Simple_repeat Simple_repeat 2 35 0 186 71 0 0 chr17 54754142 54754170 -30684310 + (A)n Simple_repeat Simple_repeat 1 28 0 262 203 0 17 chr17 54755557 54755616 -30682864 + tRNA-Lys-AAA tRNA tRNA 6 63 -13 198 0 0 0 chr17 54755723 54755745 -30682735 + (A)n Simple_repeat Simple_repeat 1 22 0 252 143 0 0 chr17 54755781 54755823 -30682657 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 327 222 0 49 chr17 54755823 54755904 -30682576 - L1MC4 LINE L1 -1339 6703 6627 299 270 70 49 chr17 54762093 54762278 -30676202 + AluJb SINE Alu 114 302 0 202 267 0 0 chr17 54763896 54763956 -30674524 + (CA)n Simple_repeat Simple_repeat 1 60 0 602 203 12 20 chr17 54764367 54764625 -30673855 + CT-rich Low_complexity Low_complexity 1 255 0 258 95 0 0 chr17 54765943 54765985 -30672495 + (CA)n Simple_repeat Simple_repeat 1 42 0 304 313 96 9 chr17 54767818 54767933 -30670547 + Tigger3(Golem) DNA MER2_type 2898 3022 -7 192 77 0 0 chr17 54769596 54769622 -30668858 + (A)n Simple_repeat Simple_repeat 1 26 0 885 282 56 38 chr17 54770455 54770979 -30667501 + L1MB7 LINE L1 5455 5993 -191 25 0 0 0 chr17 54771183 54771208 -30667272 + AT_rich Low_complexity Low_complexity 1 25 0 199 194 0 90 chr17 54771291 54771358 -30667122 - MIR3 SINE MIR -142 66 6 516 215 93 0 chr17 54775191 54775298 -30663182 + FLAM_A SINE Alu 7 123 -19 531 222 85 23 chr17 54776379 54776555 -30661925 - AluJo SINE Alu -4 308 122 374 295 125 13 chr17 54776702 54776926 -30661554 - L1P5 LINE L1 -556 5600 5352 186 43 0 0 chr17 54776928 54776951 -30661529 + (TTC)n Simple_repeat Simple_repeat 2 24 0 610 179 81 0 chr17 54777794 54777917 -30660563 + FLAM_A SINE Alu 1 133 0 21 57 0 0 chr17 54779007 54779042 -30659438 + GC_rich Low_complexity Low_complexity 1 35 0 189 147 0 0 chr17 54779153 54779187 -30659293 + (CGGGG)n Simple_repeat Simple_repeat 5 38 0 360 164 68 0 chr17 54780502 54780575 -30657905 + FLAM_A SINE Alu 32 109 -24 253 186 34 0 chr17 54780632 54780691 -30657789 - MER2 DNA MER2_type -232 113 53 260 282 34 68 chr17 54781412 54781529 -30656951 - FLAM_A SINE Alu -19 114 2 227 139 0 0 chr17 54782284 54782320 -30656160 - MER46C DNA MER2_type -27 311 276 447 247 78 7 chr17 54782412 54782566 -30655914 - Tigger4(Zombi) DNA MER2_type -48 2683 2519 270 125 0 0 chr17 54787079 54787127 -30651353 + (A)n Simple_repeat Simple_repeat 1 48 0 298 284 11 19 chr17 54788076 54788184 -30650296 + FLAM_A SINE Alu 21 109 -24 278 236 0 36 chr17 54790259 54790369 -30648111 + T-rich Low_complexity Low_complexity 2 107 0 319 207 76 0 chr17 54790465 54790575 -30647905 + FLAM_A SINE Alu 12 104 -29 378 0 0 0 chr17 54790651 54790693 -30647787 + (CA)n Simple_repeat Simple_repeat 1 42 0 319 184 184 0 chr17 54791451 54791554 -30646926 - MLT1D LTR MaLR -308 197 76 278 264 88 11 chr17 54791628 54791719 -30646761 - AluS SINE Alu -203 100 3 189 0 0 0 chr17 54791721 54791742 -30646738 + (T)n Simple_repeat Simple_repeat 1 21 0 432 0 0 0 chr17 54791869 54791917 -30646563 + (TG)n Simple_repeat Simple_repeat 2 49 0 378 248 167 12 chr17 54792141 54792366 -30646114 - L1MA4 LINE L1 -265 5906 5689 353 22 22 0 chr17 54793353 54793399 -30645081 + (TAA)n Simple_repeat Simple_repeat 2 48 0 210 301 26 9 chr17 54793590 54793703 -30644777 + (TATATG)n Simple_repeat Simple_repeat 1 115 0 182 360 237 0 chr17 54795822 54795961 -30642519 + MER5A DNA MER1_type 4 175 -14 243 0 0 0 chr17 54797084 54797111 -30641369 + (CA)n Simple_repeat Simple_repeat 2 28 0 198 71 0 0 chr17 54797803 54797831 -30640649 + (GGAA)n Simple_repeat Simple_repeat 4 31 0 473 301 160 18 chr17 54798200 54798419 -30640061 + L2 LINE L2 2721 2970 -344 264 296 82 0 chr17 54799007 54799105 -30639375 + AluSq/x SINE Alu 7 112 -191 23 0 0 0 chr17 54801134 54801157 -30637323 + AT_rich Low_complexity Low_complexity 1 23 0 228 273 102 0 chr17 54801199 54801287 -30637193 - FLAM_A SINE Alu -35 98 2 463 248 98 23 chr17 54801618 54801832 -30636648 + L1MCb LINE L1 933 1162 -4883 363 23 0 0 chr17 54804335 54804379 -30634101 + (CA)n Simple_repeat Simple_repeat 1 44 0 1415 33 0 16 chr17 54805600 54805782 -30632698 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 390 91 0 0 chr17 54805783 54805838 -30632642 + (TCC)n Simple_repeat Simple_repeat 3 57 0 180 0 0 0 chr17 54805839 54805859 -30632621 + (TG)n Simple_repeat Simple_repeat 1 20 0 328 260 110 45 chr17 54806790 54806944 -30631536 + AluSg/x SINE Alu 135 298 -4 201 227 107 80 chr17 54807439 54807514 -30630966 + MIR SINE MIR 6 82 -180 29 28 0 0 chr17 54807587 54807623 -30630857 + AT_rich Low_complexity Low_complexity 1 36 0 236 311 124 31 chr17 54807788 54807981 -30630499 - MIR SINE MIR -31 231 21 240 306 0 0 chr17 54808717 54808779 -30629701 + tRNA-Ala-GCG tRNA tRNA 1 62 -13 33 73 0 0 chr17 54808883 54808951 -30629529 + AT_rich Low_complexity Low_complexity 1 68 0 297 281 88 29 chr17 54808958 54809129 -30629351 - AluJb SINE Alu -2 300 120 302 292 100 15 chr17 54809144 54809274 -30629206 - L1MEd LINE L1 -5082 1037 897 22 35 0 0 chr17 54809549 54809578 -30628902 + AT_rich Low_complexity Low_complexity 1 29 0 201 233 50 50 chr17 54809661 54809721 -30628759 - MIR SINE MIR -197 65 6 219 173 0 0 chr17 54809740 54809792 -30628688 + T-rich Low_complexity Low_complexity 1 52 0 205 132 53 0 chr17 54809844 54809882 -30628598 + (CCCA)n Simple_repeat Simple_repeat 4 43 0 411 132 0 0 chr17 54809949 54810017 -30628463 + (CA)n Simple_repeat Simple_repeat 1 68 0 369 0 0 0 chr17 54810878 54810919 -30627561 + (CA)n Simple_repeat Simple_repeat 1 41 0 452 295 95 28 chr17 54811814 54812099 -30626381 - L1ME3A LINE L1 -294 5876 5573 182 286 79 0 chr17 54812374 54812437 -30626043 - L2 LINE L2 -503 2811 2744 350 199 81 12 chr17 54812605 54812709 -30625771 - AluS SINE Alu -204 99 2 438 271 7 71 chr17 54812950 54813105 -30625375 + MSTD LTR MaLR 235 379 -17 25 31 0 0 chr17 54813203 54813235 -30625245 + AT_rich Low_complexity Low_complexity 1 32 0 191 217 50 50 chr17 54813314 54813374 -30625106 - MIR SINE MIR -197 65 6 432 0 0 0 chr17 54814635 54814683 -30623797 + (CA)n Simple_repeat Simple_repeat 2 49 0 364 322 49 7 chr17 54814718 54814861 -30623619 + L2 LINE L2 2885 3033 -280 401 132 15 15 chr17 54817076 54817144 -30621336 - AluSp SINE Alu -117 196 129 318 162 66 63 chr17 54817822 54817952 -30620528 + AluS SINE Alu 21 95 -208 198 0 0 0 chr17 54818923 54818945 -30619535 + (CA)n Simple_repeat Simple_repeat 1 22 0 464 261 104 53 chr17 54819301 54819638 -30618842 + MER84-int LTR ERV1 1111 1464 -3490 352 349 60 21 chr17 54819728 54820012 -30618468 + MER84-int LTR ERV1 1588 1882 -3072 225 220 0 51 chr17 54820204 54820263 -30618217 - MER30 DNA MER1_type -52 178 123 403 251 206 36 chr17 54820784 54821007 -30617473 + MST-int LTR MaLR 1325 1585 -66 225 240 20 0 chr17 54821637 54821687 -30616793 + G-rich Low_complexity Low_complexity 2 52 0 303 360 48 7 chr17 54822414 54822561 -30615919 + L1MC5 LINE L1 7781 7933 -28 209 228 140 0 chr17 54822585 54822642 -30615838 + L3 LINE CR1 1159 1223 -354 514 225 44 60 chr17 54823443 54823625 -30614855 - LTR65 LTR ERV1 -176 493 315 25 31 0 0 chr17 54825829 54825861 -30612619 + AT_rich Low_complexity Low_complexity 1 32 0 228 200 50 50 chr17 54825944 54826004 -30612476 - MIR SINE MIR -197 65 6 256 164 57 172 chr17 54826901 54827023 -30611457 - AluSg SINE Alu -197 103 26 342 0 0 0 chr17 54827127 54827165 -30611315 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr17 54827817 54827840 -30610640 + AT_rich Low_complexity Low_complexity 1 23 0 352 210 150 10 chr17 54828063 54828163 -30610317 + FLAM_C SINE Alu 1 114 -19 210 37 0 0 chr17 54828406 54828433 -30610047 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr17 54829694 54829719 -30608761 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 230 152 0 0 chr17 54829790 54829823 -30608657 - Alu SINE Alu -135 168 136 233 188 21 0 chr17 54830223 54830271 -30608209 + Alu SINE Alu 145 193 -110 197 135 19 0 chr17 54830272 54830324 -30608156 + G-rich Low_complexity Low_complexity 1 53 0 623 67 11 0 chr17 54831157 54831171 -30607309 + (CACAG)n Simple_repeat Simple_repeat 1 104 0 623 67 11 0 chr17 54831171 54831260 -30607220 + (CACAG)n Simple_repeat Simple_repeat 3 92 0 1096 269 43 100 chr17 54831637 54832365 -30606115 - L1 LINE L1 -1944 4202 3517 3059 272 56 28 chr17 54833464 54835140 -30603340 - L1M2 LINE L1 -694 5606 3874 532 225 75 23 chr17 54835155 54835328 -30603152 - AluJ SINE Alu -14 298 117 1280 307 95 17 chr17 54835328 54835657 -30602823 - L1M2 LINE L1 -2972 3174 2872 216 0 0 0 chr17 54835657 54835681 -30602799 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1280 307 95 17 chr17 54835681 54836316 -30602164 - L1M2 LINE L1 -3274 2872 2134 566 268 80 20 chr17 54837001 54837080 -30601400 - L1M2 LINE L1 -727 5573 5500 279 0 0 0 chr17 54837080 54837111 -30601369 + (CA)n Simple_repeat Simple_repeat 1 31 0 566 268 80 20 chr17 54837111 54837333 -30601147 - L1M2 LINE L1 -800 5500 5254 280 286 0 0 chr17 54839136 54839206 -30599274 + MIR SINE MIR 33 102 -160 570 15 0 0 chr17 54840079 54840146 -30598334 + (TG)n Simple_repeat Simple_repeat 1 67 0 739 64 18 9 chr17 54841547 54841657 -30596823 + (GGAGA)n Simple_repeat Simple_repeat 2 112 0 183 80 0 0 chr17 54845473 54845498 -30592982 + (T)n Simple_repeat Simple_repeat 1 25 0 1775 252 15 9 chr17 54846165 54846630 -30591850 - L1MA4 LINE L1 -370 5930 5463 252 324 0 0 chr17 54847129 54847197 -30591283 + GA-rich Low_complexity Low_complexity 2 69 0 233 255 0 0 chr17 54848035 54848082 -30590398 + MER117 DNA MER1_type 102 148 -49 25 31 0 0 chr17 54852347 54852379 -30586101 + AT_rich Low_complexity Low_complexity 1 32 0 443 288 171 9 chr17 54852384 54852606 -30585874 + L1MA4A LINE L1 5634 5891 -412 235 244 26 77 chr17 54852749 54852827 -30585653 - MIR3 SINE MIR -134 74 1 257 306 90 9 chr17 54853453 54853564 -30584916 - MER67C LTR ERV1 -150 560 441 288 237 13 13 chr17 54853648 54853724 -30584756 + MLT1B LTR MaLR 86 161 -229 282 274 105 11 chr17 54854180 54854275 -30584205 - AluSq/x SINE Alu -198 105 2 22 0 0 0 chr17 54854611 54854633 -30583847 + AT_rich Low_complexity Low_complexity 1 22 0 280 309 99 0 chr17 54855223 54855304 -30583176 + AluSg SINE Alu 2 90 -210 356 210 0 0 chr17 54855379 54855441 -30583039 - AluJ SINE Alu -193 109 48 378 0 0 0 chr17 54858298 54858340 -30580140 + (TG)n Simple_repeat Simple_repeat 2 43 0 278 24 73 0 chr17 54858663 54858704 -30579776 + T-rich Low_complexity Low_complexity 3 46 0 258 219 202 53 chr17 54858865 54858979 -30579501 + FRAM SINE Alu 25 155 -11 375 259 69 60 chr17 54860096 54860250 -30578230 - FLAM_C SINE Alu -27 106 2 261 0 0 0 chr17 54860256 54860285 -30578195 + (CA)n Simple_repeat Simple_repeat 2 30 0 360 0 0 0 chr17 54860601 54860641 -30577839 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 306 0 0 0 chr17 54860692 54860726 -30577754 + (CA)n Simple_repeat Simple_repeat 2 35 0 216 0 0 0 chr17 54861234 54861258 -30577222 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 232 195 73 61 chr17 54861634 54861716 -30576764 - MLT1B LTR MaLR -266 124 42 470 82 0 14 chr17 54862235 54862308 -30576172 + (TCCA)n Simple_repeat Simple_repeat 4 75 0 475 267 38 0 chr17 54862434 54862565 -30575915 - MER58B DNA MER1_type -9 332 197 216 0 0 0 chr17 54862867 54862891 -30575589 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 357 193 114 0 chr17 54862952 54863040 -30575440 - FLAM_C SINE Alu -27 106 9 216 0 0 0 chr17 54863738 54863762 -30574718 + (TTG)n Simple_repeat Simple_repeat 3 26 0 204 204 0 0 chr17 54863936 54863980 -30574500 + (CTG)n Simple_repeat Simple_repeat 2 45 0 186 43 0 0 chr17 54864593 54864616 -30573864 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 327 298 73 0 chr17 54865756 54865880 -30572600 - FLAM_A SINE Alu 0 133 1 338 279 91 45 chr17 54867041 54867195 -30571285 - L1MC/D LINE L1 -594 5739 5579 32 26 0 0 chr17 54867584 54867623 -30570857 + AT_rich Low_complexity Low_complexity 1 39 0 732 80 0 0 chr17 54868071 54868171 -30570309 + (GAA)n Simple_repeat Simple_repeat 3 102 0 351 205 73 17 chr17 54868338 54868528 -30569952 - AluSg SINE Alu -197 103 2 258 304 29 0 chr17 54868734 54868803 -30569677 + G-rich Low_complexity Low_complexity 2 72 0 246 111 0 0 chr17 54868803 54868839 -30569641 - L1MC/D LINE L1 -758 5586 5551 192 342 72 9 chr17 54869111 54869222 -30569258 - MIR SINE MIR -33 229 112 327 49 0 0 chr17 54869499 54869540 -30568940 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 756 189 0 78 chr17 54972080 54972260 -30466220 + MER5A DNA MER1_type 1 166 -23 3731 152 37 59 chr17 54972277 54973079 -30465401 + LTR1 LTR ERV1 1 785 0 976 257 54 42 chr17 54973604 54974012 -30464468 - MER57B LTR ERV1 -21 413 1 221 182 23 0 chr17 54974175 54974219 -30464261 + (TG)n Simple_repeat Simple_repeat 1 45 0 775 307 100 43 chr17 54974230 54974742 -30463738 + L1MC/D LINE L1 3784 4324 -1822 751 273 150 70 chr17 54974769 54975678 -30462802 + L1MC/D LINE L1 4366 5346 -800 310 345 22 13 chr17 54975734 54975917 -30462563 + L1MC/D LINE L1 5447 5632 -582 44 35 0 0 chr17 54976028 54976086 -30462394 + AT_rich Low_complexity Low_complexity 1 58 0 1701 179 51 20 chr17 54976474 54976827 -30461653 - MLT1A1 LTR MaLR 0 365 2 241 293 104 9 chr17 54976829 54976935 -30461545 + L2 LINE L2 3139 3254 -18 198 0 0 0 chr17 54980386 54980408 -30458072 + (T)n Simple_repeat Simple_repeat 1 22 0 2084 174 53 71 chr17 54981118 54981496 -30456984 + MER67D LTR ERV1 1 369 -145 2490 119 8 16 chr17 54981496 54981874 -30456606 + THE1C LTR MaLR 1 375 0 2084 174 53 71 chr17 54981874 54982018 -30456462 + MER67D LTR ERV1 369 514 0 21 0 0 0 chr17 54982707 54982728 -30455752 + AT_rich Low_complexity Low_complexity 1 21 0 228 355 132 8 chr17 54983014 54983135 -30455345 - MIR3 SINE MIR -65 143 8 5969 243 66 31 chr17 54983555 54984150 -30454330 + L1MDa LINE L1 502 1075 -5465 2228 138 28 19 chr17 54984150 54984511 -30453969 + THE1B LTR MaLR 1 364 0 11147 108 17 2 chr17 54984511 54986068 -30452412 + THE1B-int LTR MaLR 1 1580 0 2252 131 28 14 chr17 54986068 54986427 -30452053 + THE1B LTR MaLR 1 364 0 5969 243 66 31 chr17 54986427 54988369 -30450111 + L1MDa LINE L1 1075 2947 -3593 2140 110 3 25 chr17 54988369 54988687 -30449793 - AluY SINE Alu 0 311 1 5969 243 66 31 chr17 54988687 54989839 -30448641 + L1MDa LINE L1 2947 4334 -2206 2100 130 3 0 chr17 54989839 54990138 -30448342 + AluSx SINE Alu 5 304 -8 5969 243 66 31 chr17 54990138 54990359 -30448121 + L1MDa LINE L1 4334 4546 -1994 484 294 0 25 chr17 54990368 54990565 -30447915 - L1 LINE L1 -2145 4001 3810 494 305 52 6 chr17 54990565 54990739 -30447741 - LTR16A LTR ERVL 0 450 269 366 322 48 14 chr17 54990758 54990904 -30447576 - LTR16A LTR ERVL -292 158 8 330 339 58 5 chr17 54990948 54991172 -30447308 - L1 LINE L1 -2373 3773 3538 384 268 43 59 chr17 54991177 54991399 -30447081 + MLT1J LTR MaLR 1 261 -250 707 273 98 53 chr17 54991632 54991734 -30446746 - L1MEd LINE L1 -4538 2403 2307 1875 162 0 14 chr17 54991734 54992030 -30446450 + AluSx SINE Alu 1 292 -20 707 273 98 53 chr17 54992030 54992557 -30445923 - L1MEd LINE L1 -4634 2307 1755 285 75 0 0 chr17 54992557 54992597 -30445883 + (TG)n Simple_repeat Simple_repeat 2 41 0 707 273 98 53 chr17 54992597 54992742 -30445738 - L1MEd LINE L1 -5186 1755 1618 1606 153 91 33 chr17 54992802 54993382 -30445098 - LTR8 LTR ERV1 0 691 1 1988 147 95 0 chr17 54993835 54994203 -30444277 - MER57A LTR ERV1 0 403 1 2023 174 66 9 chr17 54994342 54994954 -30443526 + LTR34 LTR ERV1 13 699 0 214 281 45 11 chr17 54994962 54995051 -30443429 - MIR SINE MIR -87 175 84 4568 172 10 32 chr17 54995329 54995475 -30443005 + MER4D LTR ERV1 1 149 -754 2365 91 0 0 chr17 54995475 54995772 -30442708 - AluY SINE Alu -14 297 1 4568 172 10 32 chr17 54995772 54996501 -30441979 + MER4D LTR ERV1 149 857 -46 3077 62 0 108 chr17 54996751 54997251 -30441229 - LTR7 LTR ERV1 -4 446 1 379 264 147 84 chr17 54997251 54997357 -30441123 - L1MC4a LINE L1 -1913 5895 5797 3572 139 17 31 chr17 54997357 54997999 -30440481 - MER41B LTR ERV1 0 635 3 379 264 147 84 chr17 54997999 54998360 -30440120 - L1MC4a LINE L1 -2011 5797 5379 1733 136 107 0 chr17 54998360 54998632 -30439848 - AluSx SINE Alu -11 301 1 379 264 147 84 chr17 54998632 54998761 -30439719 - L1MC4a LINE L1 -2429 5379 5260 658 340 69 50 chr17 54999121 54999992 -30438488 - L1MC4a LINE L1 -908 5238 4352 1834 208 20 3 chr17 55000261 55000603 -30437877 - MLT1A1 LTR MaLR -17 348 1 225 318 99 31 chr17 55001220 55001443 -30437037 - L1ME LINE L1 -557 5564 5327 236 245 32 21 chr17 55002222 55002316 -30436164 - L1MEd LINE L1 -4961 1462 1368 23 86 0 0 chr17 55002326 55002384 -30436096 + AT_rich Low_complexity Low_complexity 1 58 0 1812 67 0 13 chr17 55003552 55003777 -30434703 + AluSg SINE Alu 1 222 -88 297 51 0 0 chr17 55003800 55003839 -30434641 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 528 111 42 0 chr17 55005386 55005530 -30432950 + (TA)n Simple_repeat Simple_repeat 1 150 0 2218 111 3 0 chr17 55005530 55005827 -30432653 - AluSp SINE Alu -15 298 1 2215 145 22 8 chr17 55006456 55006815 -30431665 - THE1B LTR MaLR 0 364 1 292 138 31 15 chr17 55006834 55006899 -30431581 + CT-rich Low_complexity Low_complexity 3 68 0 2399 242 89 89 chr17 55006958 55008004 -30430476 + L1M4c LINE L1 31 1079 -5305 755 237 123 56 chr17 55008004 55008346 -30430134 + MLT1A1 LTR MaLR 1 365 0 2399 242 89 89 chr17 55008346 55008746 -30429734 + L1M4c LINE L1 1078 1477 -4907 395 192 27 14 chr17 55008748 55008821 -30429659 + MER84 LTR ERVI 1 74 -433 2548 167 60 19 chr17 55008821 55008934 -30429546 + MER84 LTR ERV1 2 109 -398 2078 135 3 0 chr17 55008934 55009223 -30429257 + AluSx SINE Alu 1 290 -22 297 0 0 0 chr17 55009228 55009261 -30429219 + (TAA)n Simple_repeat Simple_repeat 1 33 0 2548 167 60 19 chr17 55009261 55009627 -30428853 + MER84 LTR ERV1 112 507 0 260 250 0 0 chr17 55009628 55009696 -30428784 + L1M4c LINE L1 1476 1543 -4841 618 240 27 11 chr17 55009775 55009958 -30428522 + L1M4c LINE L1 1719 1904 -4480 299 261 61 0 chr17 55009966 55010081 -30428399 + L1M4c LINE L1 2006 2127 -4257 207 0 0 0 chr17 55010082 55010105 -30428375 + (TTA)n Simple_repeat Simple_repeat 2 24 0 358 194 0 0 chr17 55010116 55010188 -30428292 - LTR30 LTR ERV1 -98 624 553 692 145 22 167 chr17 55010189 55010437 -30428043 - LTR12 LTR ERV1 -429 1523 100 257 231 0 0 chr17 55010437 55010489 -30427991 - LTR30 LTR ERV1 -670 52 1 4868 132 11 54 chr17 55010489 55011745 -30426735 - HERV9 LTR ERV1 0 8399 6868 * 16586 97 21 7 chr17 55011744 55014326 -30424154 - HERV9 LTR ERV1 -2843 5556 2935 4181 123 5 58 chr17 55014317 55015079 -30423401 + HERV9 LTR ERV1 375 1096 -7303 * 515 167 0 0 chr17 55015067 55015157 -30423323 - HERV9 LTR ERV1 -8256 143 54 * 640 174 26 0 chr17 55015181 55015296 -30423184 - pTR5 LTR ERV1 -2272 166 49 361 175 0 25 chr17 55015296 55015376 -30423104 - LTR30 LTR ERV1 -98 624 547 635 234 13 39 chr17 55015378 55015578 -30422902 + L1M4c LINE L1 2133 2324 -4060 186 103 0 0 chr17 55015578 55015607 -30422873 + (CA)n Simple_repeat Simple_repeat 2 30 0 635 234 13 39 chr17 55015607 55015713 -30422767 + L1M4c LINE L1 2324 2431 -3953 2926 89 85 69 chr17 55016159 55016626 -30421854 + MER41A LTR ERV1 9 523 -112 3162 41 0 3 chr17 55016626 55017016 -30421464 - L1PA4 LINE L1 -3 6152 5764 2926 89 85 69 chr17 55017016 55017124 -30421356 + MER41A LTR ERV1 523 628 -7 283 113 57 19 chr17 55017131 55017184 -30421296 + MER41A-int LTR ERV1 1 55 -5891 5290 130 38 29 chr17 55017221 55020067 -30418413 + MER41A-int LTR ERV1 1 3787 -1228 33227 109 9 10 chr17 55020068 55022455 -30416025 - L1PA6 LINE L1 -7 6147 3759 2244 106 0 0 chr17 55022455 55022757 -30415723 - AluY SINE Alu -8 303 2 33227 109 9 10 chr17 55022757 55026514 -30411966 - L1PA6 LINE L1 -2395 3759 11 8041 96 43 22 chr17 55026532 55027853 -30410627 + MER41A-int LTR ERV1 4596 5944 -2 3826 100 0 42 chr17 55027853 55028431 -30410049 + MER41A LTR ERV1 1 554 0 287 130 338 13 chr17 55028431 55028508 -30409972 + MER41A-int LTR ERV1 1 102 -5844 286 203 145 43 chr17 55028719 55028857 -30409623 + MER104 DNA Tc2 1 152 -28 1226 210 32 61 chr17 55029824 55030200 -30408280 + MLT1A1 LTR MaLR 1 365 0 326 373 37 25 chr17 55030506 55030667 -30407813 - MER5A DNA MER1_type -21 168 6 193 245 0 57 chr17 55031639 55031692 -30406788 - MER5B DNA MER1_type -16 162 113 209 349 9 38 chr17 55031882 55031988 -30406492 - L2 LINE L2 -212 3060 2958 2243 105 3 0 chr17 55032621 55032944 -30405536 - L1PA13 LINE L1 -1 6162 5839 588 65 0 0 chr17 55032945 55033022 -30405458 + (TA)n Simple_repeat Simple_repeat 1 77 0 186 43 0 0 chr17 55033088 55033111 -30405369 + (TA)n Simple_repeat Simple_repeat 2 24 0 1266 90 0 98 chr17 55033112 55033358 -30405122 - L1PA13 LINE L1 -336 5827 5606 233 182 0 0 chr17 55033353 55033408 -30405072 + L1MA3 LINE L1 6251 6305 0 * 1641 116 14 0 chr17 55034186 55034463 -30404017 + L1MA3 LINE L1 6025 6305 0 486 295 13 0 chr17 55035338 55035487 -30402993 + MLT1I LTR MaLR 5 155 -254 1437 243 85 25 chr17 55035548 55035984 -30402496 - MLT1C LTR MaLR 0 467 6 305 316 71 0 chr17 55035988 55036143 -30402337 + MLT1I LTR MaLR 218 383 -26 187 298 137 30 chr17 55037779 55037947 -30400533 - MIR SINE MIR -38 224 39 2199 111 3 7 chr17 55039331 55039628 -30398852 + AluSg SINE Alu 1 296 -14 537 260 66 15 chr17 55039646 55039842 -30398638 - MIR SINE MIR -50 212 7 2566 228 29 26 chr17 55040632 55041397 -30397083 - L1ME3 LINE L1 0 6162 5396 2289 88 3 3 chr17 55041431 55041727 -30396753 - AluY SINE Alu -15 296 1 781 216 56 113 chr17 55041747 55042298 -30396182 + L1M4 LINE L1 2214 2733 -3413 223 281 47 8 chr17 55042368 55042496 -30395984 + (TA)n Simple_repeat Simple_repeat 1 133 0 * 230 307 9 26 chr17 55042418 55042532 -30395948 + (TATATG)n Simple_repeat Simple_repeat 6 117 0 330 331 51 13 chr17 55042892 55043049 -30395431 - MLT1I LTR MaLR -4 405 243 340 228 16 167 chr17 55043168 55043414 -30395066 + L2 LINE L2 3103 3311 -2 1216 282 54 40 chr17 55043463 55043623 -30394857 + L1ME3A LINE L1 5325 5481 -689 1664 137 137 0 chr17 55043623 55043885 -30394595 + AluSx SINE Alu 1 298 -4 1216 282 54 40 chr17 55043885 55044370 -30394110 + L1ME3A LINE L1 5481 5985 -185 2516 57 0 22 chr17 55044370 55044685 -30393795 - AluY SINE Alu -3 308 1 1216 282 54 40 chr17 55044685 55044793 -30393687 + L1ME3A LINE L1 5985 6090 -80 391 329 55 37 chr17 55045423 55045587 -30392893 + MER5B DNA MER1_type 11 177 -1 2250 121 0 0 chr17 55045717 55046022 -30392458 - AluSx SINE Alu -7 305 1 2167 128 10 0 chr17 55046596 55046902 -30391578 - AluSx SINE Alu -3 309 1 183 298 43 0 chr17 55047384 55047431 -30391049 + L2 LINE L2 3222 3270 -2 2013 121 78 29 chr17 55048050 55048397 -30390083 - THE1B LTR MaLR 0 364 1 43458 106 9 16 chr17 55049267 55053326 -30385154 - HERV9 LTR ERV1 -1712 6687 2688 2077 92 0 28 chr17 55053326 55053608 -30384872 - AluY SINE Alu -16 295 22 43458 106 9 16 chr17 55053608 55056226 -30382254 - HERV9 LTR ERV1 -5711 2688 54 672 139 0 0 chr17 55056242 55056343 -30382137 - LTR12 LTR ERV1 -130 584 484 281 274 11 0 chr17 55056343 55056438 -30382042 - LTR30 LTR ERV1 -75 647 552 1552 105 14 47 chr17 55056438 55056714 -30381766 - LTR12 LTR ERV1 -429 285 19 1160 79 12 6 chr17 55056714 55056879 -30381601 + PABL_A LTR ERV1 495 660 0 282 290 19 77 chr17 55058933 55059088 -30379392 + MIR3 SINE MIR 17 162 -46 276 282 0 0 chr17 55059247 55059318 -30379162 - MIR SINE MIR -27 235 165 374 169 0 0 chr17 55059325 55059428 -30379052 - AluJ/FRAM SINE Alu 0 326 224 230 288 72 72 chr17 55060126 55060237 -30378243 - L2 LINE L2 0 3313 3203 259 292 79 0 chr17 55061072 55061161 -30377319 - MIR SINE MIR -147 115 20 588 205 101 0 chr17 55061185 55061326 -30377154 + MER58A DNA MER1_type 35 169 -55 284 109 0 22 chr17 55061319 55061365 -30377115 - Charlie5 DNA MER1_type -2562 50 6 * 420 266 73 66 chr17 55061545 55061831 -30376649 - MLT1I LTR MaLR -52 357 70 314 355 7 35 chr17 55061919 55062060 -30376420 - MIR3 SINE MIR -52 156 20 788 302 85 21 chr17 55062110 55062534 -30375946 + LTR33 LTR ERVL 1 451 -70 571 167 0 0 chr17 55062536 55062620 -30375860 + AluJ/FLAM SINE Alu 1 84 -228 219 196 0 0 chr17 55063034 55063080 -30375400 - L2 LINE L2 0 3313 3268 313 258 34 22 chr17 55063690 55063779 -30374701 + MIR SINE MIR 15 104 -158 519 358 79 10 chr17 55063782 55064198 -30374282 + LTR16A LTR ERVL 1 445 -5 765 334 28 26 chr17 55064201 55064501 -30373979 + HERV16 LTR ERVL 3 306 -4690 800 268 6 0 chr17 55064501 55064684 -30373796 - MER5A DNA MER1_type -1 188 5 765 334 28 26 chr17 55064684 55064772 -30373708 + HERV16 LTR ERVL 306 392 -4604 23 0 0 0 chr17 55064772 55064795 -30373685 + AT_rich Low_complexity Low_complexity 1 23 0 382 198 20 30 chr17 55065154 55065255 -30373225 + LTR37A LTR ERV1 41 140 -286 1647 123 45 41 chr17 55065562 55065830 -30372650 + AluSq SINE Alu 1 269 -44 296 219 12 156 chr17 55066466 55066626 -30371854 + MER92B LTR ERV1 1 137 -499 328 227 0 0 chr17 55066706 55066772 -30371708 + MER92C LTR ERV1 487 552 -2 431 271 45 32 chr17 55066882 55067037 -30371443 + MIR SINE MIR 104 260 -2 1724 124 62 33 chr17 55068173 55068492 -30369988 + AluSx SINE Alu 1 327 0 200 301 48 41 chr17 55069767 55069913 -30368567 - L2 LINE L2 -508 2806 2660 1729 208 27 3 chr17 55069932 55070264 -30368216 - MER2 DNA MER2_type -5 340 1 24 32 0 0 chr17 55071124 55071155 -30367325 + AT_rich Low_complexity Low_complexity 1 31 0 203 378 14 0 chr17 55071259 55071333 -30367147 - MIR SINE MIR -142 120 46 344 242 105 24 chr17 55071368 55071492 -30366988 + L2 LINE L2 3139 3272 0 464 332 96 5 chr17 55072206 55072414 -30366066 + MIR SINE MIR 28 254 -8 537 317 115 55 chr17 55072500 55072916 -30365564 - LTR16A LTR ERVL -9 441 1 277 248 75 68 chr17 55073220 55073346 -30365134 + MIR SINE MIR 2 126 -82 1546 253 50 11 chr17 55073350 55073793 -30364687 + MER110 LTR ERV1 17 476 -15 2161 157 47 34 chr17 55073795 55074340 -30364140 + MLT2A2 LTR ERVL 1 554 0 211 404 15 22 chr17 55074358 55074503 -30363977 - L2 LINE L2 -2191 1123 979 725 223 112 0 chr17 55074503 55074700 -30363780 - MER20 DNA MER1_type 0 219 1 211 404 15 22 chr17 55074700 55074826 -30363654 - L2 LINE L2 -2335 979 854 2749 134 49 7 chr17 55075281 55075828 -30362652 + LTR9B LTR ERV1 5 644 0 4389 81 36 11 chr17 55077162 55078261 -30360219 + MER11A LTR ERVK 1 1266 0 2239 91 0 7 chr17 55078452 55078749 -30359731 - AluSq SINE Alu -18 295 1 673 199 101 37 chr17 55079365 55079632 -30358848 - L1MD3 LINE L1 -9 7943 6088 1219 205 94 71 chr17 55079638 55080049 -30358431 - MLT2D LTR ERVL -5 459 1 349 300 0 10 chr17 55080157 55080257 -30358223 - MIR SINE MIR -11 251 153 194 280 40 0 chr17 55080795 55080845 -30357635 - L2 LINE L2 0 3272 3221 1308 244 83 75 chr17 55080886 55081394 -30357086 + MLT1F LTR MaLR 1 512 -30 335 213 27 27 chr17 55081459 55081534 -30356946 - MIR SINE MIR -15 247 173 1380 179 65 93 chr17 55081562 55082026 -30356454 - MLT1C LTR MaLR -16 451 1 425 264 165 0 chr17 55082042 55082163 -30356317 - MIR SINE MIR -109 153 13 1704 194 45 0 chr17 55082185 55082515 -30355965 - MER7A DNA MER2_type -2 344 2 22 0 0 0 chr17 55083942 55083964 -30354516 + AT_rich Low_complexity Low_complexity 1 22 0 1063 324 32 18 chr17 55084052 55084490 -30353990 - MLT1J LTR MaLR 0 511 68 1854 144 0 24 chr17 55084499 55084819 -30353661 + AluSx SINE Alu 1 313 0 24 103 0 0 chr17 55084927 55085014 -30353466 + AT_rich Low_complexity Low_complexity 1 87 0 720 219 32 26 chr17 55085028 55085183 -30353297 - MER77 LTR ERV1 -409 196 41 699 285 89 46 chr17 55085896 55086243 -30352237 + MLT1G LTR MaLR 15 376 -214 626 282 17 6 chr17 55086353 55086527 -30351953 + MLT1G LTR MaLR 409 584 -6 2182 164 23 46 chr17 55087605 55088043 -30350437 - MSTC LTR MaLR 0 428 1 1756 122 12 0 chr17 55088236 55088482 -30349998 + AluSq SINE Alu 35 283 -30 186 43 0 0 chr17 55088485 55088508 -30349972 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1781 135 3 80 chr17 55088513 55088838 -30349642 + AluSx SINE Alu 1 300 -12 3740 180 83 8 chr17 55089019 55089787 -30348693 + LTR1B LTR ERV1 1 826 0 5728 296 118 32 chr17 55090250 55092387 -30346093 + L2 LINE L2 19 2547 -766 243 88 0 0 chr17 55092387 55092421 -30346059 + (CAGCC)n Simple_repeat Simple_repeat 5 38 0 5728 296 118 32 chr17 55092421 55093261 -30345219 + L2 LINE L2 2547 3313 0 33 25 0 0 chr17 55093329 55093369 -30345111 + AT_rich Low_complexity Low_complexity 1 40 0 539 158 58 7 chr17 55093805 55093944 -30344536 - Charlie5 DNA MER1_type -54 2558 2413 326 294 75 86 chr17 55094022 55094407 -30344073 - L1M4 LINE L1 -1589 4557 4177 3294 122 6 34 chr17 55095138 55095639 -30342841 + MER1A DNA MER1_type 35 521 -8 445 317 162 34 chr17 55095971 55096384 -30342096 - HAL1 LINE L1 -762 1745 1280 311 253 0 53 chr17 55096474 55096569 -30341911 - L1MC4 LINE L1 -1339 6703 6614 331 307 0 0 chr17 55096599 55096687 -30341793 + L1MC4 LINE L1 6616 6703 -1339 324 210 36 13 chr17 55096631 55096730 -30341750 - L1MC4 LINE L1 -1339 6983 1995 * 304 211 0 62 chr17 55096743 55096865 -30341615 + L1MC3 LINE L1 6569 6646 -1139 462 236 22 11 chr17 55096920 55097098 -30341382 + (TA)n Simple_repeat Simple_repeat 1 180 0 582 191 13 21 chr17 55097138 55097383 -30341097 + (TA)n Simple_repeat Simple_repeat 1 243 0 1484 294 50 33 chr17 55097535 55098116 -30340364 - MLT1E LTR MaLR -2 591 1 1742 210 73 54 chr17 55098914 55099418 -30339062 + MER67D LTR ERV1 1 514 0 21 0 0 0 chr17 55099537 55099558 -30338922 + AT_rich Low_complexity Low_complexity 1 21 0 26 64 0 0 chr17 55099670 55099717 -30338763 + AT_rich Low_complexity Low_complexity 1 47 0 21 36 0 0 chr17 55100917 55100945 -30337535 + AT_rich Low_complexity Low_complexity 1 28 0 346 245 113 31 chr17 55101007 55101166 -30337314 + L1MC/D LINE L1 3026 3197 -2949 267 284 153 44 chr17 55101639 55102051 -30336429 + L1MC/D LINE L1 5254 5710 -2098 300 277 0 12 chr17 55103037 55103120 -30335360 - MIR SINE MIR 0 262 181 350 326 136 0 chr17 55103132 55103316 -30335164 + L1ME LINE L1 5530 5738 -383 22 35 0 0 chr17 55103552 55103581 -30334899 + AT_rich Low_complexity Low_complexity 1 29 0 33 43 0 0 chr17 55103650 55103697 -30334783 + AT_rich Low_complexity Low_complexity 1 47 0 245 248 147 37 chr17 55103921 55104030 -30334450 - MIR SINE MIR -71 191 71 243 0 0 0 chr17 55104187 55104214 -30334266 + (CA)n Simple_repeat Simple_repeat 1 27 0 1512 257 79 77 chr17 55104218 55104752 -30333728 + MLT1E LTR MaLR 59 593 0 324 48 0 0 chr17 55105035 55105077 -30333403 + (TG)n Simple_repeat Simple_repeat 2 43 0 287 289 193 7 chr17 55105674 55105809 -30332671 + MIR SINE MIR 20 179 -83 240 309 134 0 chr17 55107380 55107477 -30331003 - MIR SINE MIR -73 189 80 1526 194 16 87 chr17 55107641 55108034 -30330446 - MLT1A1 LTR MaLR -1 466 1 59 81 0 0 chr17 55108287 55108423 -30330057 + AT_rich Low_complexity Low_complexity 1 136 0 544 172 0 33 chr17 55109344 55109466 -30329014 + LTR41 LTR ERVL 650 767 -6 266 264 103 0 chr17 55109546 55109633 -30328847 + MIR SINE MIR 113 208 -54 237 371 86 0 chr17 55109838 55109943 -30328537 + L2 LINE L2 3198 3311 -2 238 134 15 45 chr17 55110374 55110441 -30328039 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 225 96 68 14 chr17 55110493 55110566 -30327914 + (TA)n Simple_repeat Simple_repeat 2 78 0 459 125 14 0 chr17 55112412 55112484 -30325996 + MADE1 DNA Mariner 1 73 -7 1238 284 196 21 chr17 55112981 55113593 -30324887 - L2 LINE L2 -592 2722 2004 2322 101 48 22 chr17 55113612 55113967 -30324513 - THE1B LTR MaLR 0 364 1 11452 101 19 0 chr17 55113967 55115517 -30322963 - THE1B-int LTR MaLR 0 1580 1 1060 111 13 7 chr17 55115519 55115672 -30322808 - THE1B LTR MaLR -2 362 209 2160 123 51 23 chr17 55115521 55115871 -30322609 - THE1B LTR MaLR -4 360 1 313 286 24 0 chr17 55115871 55115955 -30322525 - L2 LINE L2 -1310 2004 1919 211 360 13 0 chr17 55115952 55116027 -30322453 - MIR SINE MIR -172 90 15 * 801 50 0 0 chr17 55116134 55116234 -30322246 + L1PA3 LINE L1 6053 6152 -3 940 215 5 5 chr17 55116886 55117091 -30321389 - L1PB4 LINE L1 -2 6154 5950 261 0 0 0 chr17 55117664 55117693 -30320787 + (TG)n Simple_repeat Simple_repeat 2 30 0 252 376 43 0 chr17 55117806 55117923 -30320557 + MIR3 SINE MIR 33 154 -54 364 323 82 35 chr17 55118302 55118534 -30319946 + MIR SINE MIR 20 262 0 2381 93 3 0 chr17 55119158 55119470 -30319010 + AluSp SINE Alu 1 313 0 240 35 0 0 chr17 55121752 55121781 -30316699 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 206 323 46 0 chr17 55121952 55122017 -30316463 + L2 LINE L2 3196 3263 -9 237 159 0 0 chr17 55123949 55123993 -30314487 + A-rich Low_complexity Low_complexity 1 44 0 1069 219 59 6 chr17 55124043 55124363 -30314117 + LTR37A LTR ERV1 81 417 -9 3025 177 88 10 chr17 55125891 55126513 -30311967 - LTR51 LTR ERV1 0 671 1 445 316 30 12 chr17 55127416 55127584 -30310896 - LTR33 LTR ERVL -336 185 15 225 292 80 89 chr17 55127532 55127868 -30310612 + LTR33 LTR ERVL 134 466 -55 * 1073 240 116 30 chr17 55127896 55128258 -30310222 - MLT1C LTR MaLR -9 458 66 302 262 0 48 chr17 55128398 55128482 -30309998 - MIR SINE MIR -60 148 69 325 364 0 0 chr17 55129582 55129681 -30308799 - L2 LINE L2 -23 3249 3151 22 0 0 0 chr17 55129681 55129703 -30308777 + AT_rich Low_complexity Low_complexity 1 22 0 325 143 29 14 chr17 55131705 55131775 -30306705 + MLT1L LTR MaLR 545 615 0 254 284 45 11 chr17 55131775 55131863 -30306617 + L3 LINE CR1 925 1015 -562 28 79 0 0 chr17 55132051 55132114 -30306366 + AT_rich Low_complexity Low_complexity 1 63 0 270 106 0 0 chr17 55132157 55132204 -30306276 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1486 188 7 15 chr17 55132206 55132477 -30306003 - AluJo SINE Alu -29 283 15 481 330 85 14 chr17 55132495 55132707 -30305773 + MIR SINE MIR 32 258 -4 218 320 148 33 chr17 55133007 55133129 -30305351 - L2 LINE L2 0 3272 3137 27 49 0 0 chr17 55133813 55133854 -30304626 + AT_rich Low_complexity Low_complexity 1 41 0 6660 130 53 29 chr17 55134149 55134994 -30303486 - L1PA14 LINE L1 0 6161 5338 2226 94 13 7 chr17 55134994 55135303 -30303177 - AluY SINE Alu 0 311 1 6660 130 53 29 chr17 55135303 55136850 -30301630 - L1PA14 LINE L1 -823 5338 3861 384 120 27 0 chr17 55136849 55136924 -30301556 - L1MA5A LINE L1 -117 6180 6104 * 36 0 0 0 chr17 55137062 55137098 -30301382 + AT_rich Low_complexity Low_complexity 1 36 0 292 255 42 0 chr17 55137161 55137269 -30301211 - L1MC/D LINE L1 -312 5809 5700 2168 119 3 26 chr17 55137439 55137751 -30300729 + AluSg SINE Alu 1 305 -5 23 86 0 0 chr17 55138007 55138065 -30300415 + AT_rich Low_complexity Low_complexity 1 58 0 295 323 252 7 chr17 55138599 55138754 -30299726 - MER91A DNA MER1_type 0 196 4 252 276 31 0 chr17 55139607 55139705 -30298775 - L1MC4a LINE L1 -1893 5915 5815 1253 107 16 82 chr17 55139743 55139900 -30298580 - L1PA4 LINE L1 -293 5862 5696 2326 39 3 0 chr17 55139900 55140182 -30298298 + L1PA4 LINE L1 5866 6151 -4 1253 107 16 82 chr17 55140182 55140200 -30298280 - L1PA4 LINE L1 -459 5696 5678 8211 55 1 0 chr17 55140200 55141165 -30297315 - LTR5 LTR ERVK -3 966 1 1253 107 16 82 chr17 55141165 55141275 -30297205 - L1PA4 LINE L1 -477 5678 5611 499 243 60 39 chr17 55141300 55141567 -30296913 - L1MC4a LINE L1 -749 5397 5200 2058 119 3 0 chr17 55142863 55143181 -30295299 + L1MA3 LINE L1 5987 6305 0 694 343 46 20 chr17 55143989 55144551 -30293929 + L1ME3 LINE L1 5378 5954 -208 714 195 0 8 chr17 55144795 55144923 -30293557 - AluJ SINE Alu -4 308 182 886 150 0 0 chr17 55144923 55145056 -30293424 - AluJ SINE Alu -179 133 1 184 288 130 89 chr17 55145147 55145293 -30293187 + L2 LINE L2 3112 3263 -9 420 97 0 0 chr17 55145356 55145418 -30293062 + (TG)n Simple_repeat Simple_repeat 1 62 0 1837 170 3 3 chr17 55146046 55146346 -30292134 - AluSx SINE Alu -12 300 1 1011 259 133 0 chr17 55146668 55147015 -30291465 + L1MC4 LINE L1 7487 7879 -163 311 309 19 11 chr17 55147265 55147429 -30291051 + L2 LINE L2 3010 3255 -17 210 348 37 30 chr17 55148981 55149116 -30289364 - MIR SINE MIR -65 197 62 225 343 0 0 chr17 55149120 55149193 -30289287 + MER81 DNA DNA 1 73 -41 362 300 0 0 chr17 55149196 55149276 -30289204 + MER81 DNA DNA 31 110 -4 1590 226 35 35 chr17 55150244 55150783 -30287697 + L1MD1 LINE L1 4414 4952 -1194 5041 180 23 6 chr17 55150812 55151878 -30286602 + L1MD1 LINE L1 5144 6228 -14 1905 118 7 0 chr17 55151892 55152180 -30286300 + L1PB1 LINE L1 5845 6134 -17 191 59 0 29 chr17 55152187 55152221 -30286259 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 1827 172 57 25 chr17 55152417 55152779 -30285701 + MLT2D LTR ERVL 1 379 -35 306 0 0 0 chr17 55152779 55152813 -30285667 + (TG)n Simple_repeat Simple_repeat 2 35 0 1827 172 57 25 chr17 55152813 55152851 -30285629 + MLT2D LTR ERVL 379 414 0 1844 138 105 12 chr17 55152956 55153290 -30285190 + MSTA LTR MaLR 64 428 0 426 254 40 16 chr17 55153303 55153429 -30285051 - MIR SINE MIR -50 212 84 2055 85 0 0 chr17 55153738 55153997 -30284483 - AluY SINE Alu -18 293 35 304 275 84 67 chr17 55154409 55154587 -30283893 + MARNA DNA Mariner 28 208 -378 316 212 94 12 chr17 55154636 55154721 -30283759 + MIR SINE MIR 89 180 -82 621 269 92 40 chr17 55154735 55154758 -30283722 - MIR SINE MIR 0 262 242 2335 132 83 0 chr17 55154758 55155153 -30283327 + MSTA LTR MaLR 1 428 0 621 269 92 40 chr17 55155153 55155378 -30283102 - MIR SINE MIR -20 242 1 24 0 0 0 chr17 55156484 55156508 -30281972 + AT_rich Low_complexity Low_complexity 1 24 0 2385 80 3 0 chr17 55156745 55157046 -30281434 + AluY SINE Alu 1 302 -9 23 0 0 0 chr17 55157491 55157514 -30280966 + AT_rich Low_complexity Low_complexity 1 23 0 186 320 0 0 chr17 55157712 55157762 -30280718 + MIR SINE MIR 201 250 -12 1924 111 7 28 chr17 55158061 55158389 -30280091 - AluY SINE Alu 0 322 1 391 339 43 100 chr17 55158723 55158942 -30279538 - L2 LINE L2 0 3272 3073 809 187 141 35 chr17 55158942 55159140 -30279340 + MER20 DNA MER1_type 1 219 0 391 339 43 100 chr17 55159140 55159221 -30279259 - L2 LINE L2 -199 3073 2989 435 239 158 68 chr17 55159224 55159534 -30278946 - L2 LINE L2 -1387 1927 1590 1129 169 17 96 chr17 55159535 55159837 -30278643 + L1MB8 LINE L1 5900 6177 -1 313 140 0 183 chr17 55160227 55160320 -30278160 - MADE1 DNA Mariner -4 76 1 1913 199 11 0 chr17 55160626 55160987 -30277493 - MLT1A1 LTR MaLR 0 365 1 199 359 0 0 chr17 55161220 55161284 -30277196 + MIR SINE MIR 83 146 -62 300 294 83 0 chr17 55162438 55162547 -30275933 - L1ME4a LINE L1 -2 6119 6002 293 256 95 0 chr17 55162612 55162749 -30275731 - L1ME4a LINE L1 -200 5921 5772 29 28 0 0 chr17 55162791 55162827 -30275653 + AT_rich Low_complexity Low_complexity 1 36 0 436 145 84 0 chr17 55164969 55165052 -30273428 - MER89 LTR ERV1 -469 90 1 4483 21 11 0 chr17 55165517 55166045 -30272435 - L1PA4 LINE L1 0 6155 5622 501 223 17 6 chr17 55166257 55166376 -30272104 - MER58B DNA MER1_type -20 321 202 504 365 72 17 chr17 55167134 55167493 -30270987 + L2 LINE L2 2422 2800 -514 230 278 70 35 chr17 55167689 55167804 -30270676 + L2 LINE L2 3183 3301 -12 183 206 0 0 chr17 55168172 55168206 -30270274 + L2 LINE L2 3263 3296 -17 320 249 32 134 chr17 55168512 55168729 -30269751 + MIR SINE MIR 18 212 -50 23 97 0 0 chr17 55169413 55169485 -30268995 + AT_rich Low_complexity Low_complexity 1 72 0 23 0 0 0 chr17 55169675 55169698 -30268782 + AT_rich Low_complexity Low_complexity 1 23 0 2244 113 0 0 chr17 55171365 55171674 -30266806 + AluSc SINE Alu 1 309 0 250 264 16 47 chr17 55171723 55171852 -30266628 - L1MC5 LINE L1 -25 7936 7812 240 186 34 0 chr17 55172623 55172682 -30265798 + (TA)n Simple_repeat Simple_repeat 1 61 0 189 107 0 0 chr17 55172772 55172800 -30265680 + (TA)n Simple_repeat Simple_repeat 2 29 0 289 284 0 0 chr17 55172917 55172984 -30265496 - L2 LINE L2 -1 3312 3246 488 307 40 0 chr17 55173046 55173222 -30265258 + MIR SINE MIR 74 256 -6 244 241 37 19 chr17 55173613 55173667 -30264813 + L2 LINE L2 3203 3257 -15 26 50 0 0 chr17 55173902 55173942 -30264538 + AT_rich Low_complexity Low_complexity 1 40 0 1920 129 0 4 chr17 55174664 55174944 -30263536 + AluSx SINE Alu 1 279 -33 357 24 0 0 chr17 55174944 55174986 -30263494 + (CA)n Simple_repeat Simple_repeat 1 42 0 270 0 0 0 chr17 55174985 55175015 -30263465 + (GA)n Simple_repeat Simple_repeat 2 31 0 * 247 323 67 73 chr17 55175331 55175495 -30262985 - L3 LINE CR1 -41 1536 1374 5122 162 13 48 chr17 55175623 55176103 -30262377 - L1MA3 LINE L1 -43 6262 5766 239 139 0 0 chr17 55176103 55176146 -30262334 - AluSq SINE Alu 0 299 257 5122 162 13 48 chr17 55176146 55176653 -30261827 - L1MA3 LINE L1 -539 5766 5270 33737 37 5 2 chr17 55176701 55181615 -30256865 - L1PA4 LINE L1 -2 6153 1231 816 241 44 51 chr17 55181809 55182124 -30256356 - MER83C LTR ERV1 -12 361 49 190 255 15 7 chr17 55182233 55182294 -30256186 - L2 LINE L2 -189 3083 3022 2401 266 51 35 chr17 55182639 55183896 -30254584 - L1ME1 LINE L1 -4 6162 4860 1779 145 0 0 chr17 55183896 55184158 -30254322 - AluSq SINE Alu -51 262 1 2401 266 51 35 chr17 55184158 55184632 -30253848 - L1ME1 LINE L1 -1306 4860 4395 979 346 91 40 chr17 55184733 55185990 -30252490 + L2 LINE L2 1939 3313 0 233 312 81 69 chr17 55185996 55186169 -30252311 - L3 LINE CR1 -639 938 764 214 317 83 25 chr17 55186414 55186534 -30251946 - L3 LINE CR1 -1127 450 324 270 65 87 0 chr17 55187799 55187845 -30250635 - MER53 DNA DNA -47 142 93 5570 60 3 1 chr17 55187852 55188571 -30249909 - L1PA7 LINE L1 -3 6151 5432 200 271 57 43 chr17 55189862 55189932 -30248548 - L2 LINE L2 -27 3286 3216 859 219 0 0 chr17 55190316 55190467 -30248013 + FRAM SINE Alu 1 150 -26 636 207 29 0 chr17 55190482 55190656 -30247824 + GA-rich Low_complexity Low_complexity 2 180 0 626 263 15 39 chr17 55191789 55191994 -30246486 + MIR SINE MIR 9 208 -54 365 274 60 8 chr17 55193434 55193570 -30244910 + MIR SINE MIR 71 213 -49 5319 119 61 0 chr17 55193655 55195169 -30243311 + L1PA15 LINE L1 4586 6163 -2 1858 255 67 73 chr17 55195367 55196509 -30241971 + L1MC5 LINE L1 6616 7751 -210 23 0 0 0 chr17 55196576 55196599 -30241881 + AT_rich Low_complexity Low_complexity 1 23 0 289 330 59 17 chr17 55196688 55196806 -30241674 + L2 LINE L2 3141 3263 -9 229 254 142 68 chr17 55197556 55197761 -30240719 - MIR SINE MIR -10 252 33 552 204 0 0 chr17 55198148 55198246 -30240234 - AluJb SINE Alu -24 288 191 22 0 0 0 chr17 55198838 55198860 -30239620 + AT_rich Low_complexity Low_complexity 1 22 0 1664 247 63 2 chr17 55199654 55200131 -30238349 - L1MC4a LINE L1 -208 7600 7095 1013 291 43 15 chr17 55200169 55200561 -30237919 - L2 LINE L2 -805 2509 2107 1178 215 80 62 chr17 55202611 55203139 -30235341 - L1MC4 LINE L1 -22 7973 7308 235 200 153 0 chr17 55203156 55203241 -30235239 - L1MC4a LINE L1 -1517 6291 6194 1198 126 16 37 chr17 55203286 55203477 -30235003 + AluSq SINE Alu 1 187 -126 645 37 66 40 chr17 55203493 55204021 -30234459 + (TA)n Simple_repeat Simple_repeat 1 541 0 1500 199 3 33 chr17 55204031 55204332 -30234148 + AluJo SINE Alu 1 292 -20 291 28 0 0 chr17 55204334 55204370 -30234110 + (CA)n Simple_repeat Simple_repeat 2 37 0 1474 309 98 84 chr17 55204527 55206447 -30232033 - HERV16 LTR ERVL -3049 1947 1 1319 248 70 31 chr17 55206447 55206863 -30231617 - LTR16A1 LTR ERVL 0 457 26 418 303 0 56 chr17 55206955 55207133 -30231347 - LTR33 LTR ERVL -348 173 6 328 318 66 40 chr17 55207253 55207451 -30231029 + L1ME LINE L1 5491 5693 -428 21 0 0 0 chr17 55207510 55207531 -30230949 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 55207599 55207636 -30230844 + AT_rich Low_complexity Low_complexity 1 37 0 1784 138 3 47 chr17 55207754 55208093 -30230387 + AluSx SINE Alu 1 326 0 711 180 113 13 chr17 55208449 55208599 -30229881 - FRAM SINE Alu -1 165 1 912 217 31 12 chr17 55208901 55209159 -30229321 + LTR37B LTR ERV1 198 460 -8 35506 101 17 12 chr17 55209427 55210906 -30227574 + L1P2 LINE L1 11 1481 -4673 2344 93 0 0 chr17 55210906 55211207 -30227273 + AluY SINE Alu 1 301 -10 35506 101 17 12 chr17 55211207 55215199 -30223281 + L1P2 LINE L1 1481 5512 -642 4545 115 40 32 chr17 55215199 55216300 -30222180 - MER11A LTR ERVK 0 1071 1 * 5080 56 6 22 chr17 55216300 55216958 -30221522 + L1PA6 LINE L1 5507 6153 -1 2057 123 0 13 chr17 55216966 55217282 -30221198 + AluSx SINE Alu 1 312 0 227 296 113 0 chr17 55218841 55218912 -30219568 - L3 LINE CR1 -189 1388 1310 2064 135 3 0 chr17 55219576 55219905 -30218575 - AluSq SINE Alu 0 313 1 444 277 20 7 chr17 55220333 55220481 -30217999 + L1ME1 LINE L1 45 194 -6202 1919 239 63 40 chr17 55220638 55221366 -30217114 + L1ME1 LINE L1 425 1169 -5227 2218 251 87 38 chr17 55221382 55222400 -30216080 + L1ME1 LINE L1 2723 3805 -2410 2303 105 3 6 chr17 55222400 55222714 -30215766 - AluSq SINE Alu 0 313 1 2218 251 87 38 chr17 55222714 55222843 -30215637 + L1ME1 LINE L1 3805 3926 -2289 2266 231 62 58 chr17 55222845 55224346 -30214134 + L1ME1 LINE L1 4587 6239 -164 435 148 0 12 chr17 55224346 55224427 -30214053 + MADE1 DNA Mariner 1 80 0 2266 231 62 58 chr17 55224427 55224591 -30213889 + L1ME1 LINE L1 6239 6401 -2 192 259 103 0 chr17 55224745 55224803 -30213677 + L2 LINE L2 3209 3272 0 22 35 0 0 chr17 55224831 55224860 -30213620 + AT_rich Low_complexity Low_complexity 1 29 0 275 331 50 25 chr17 55225406 55225527 -30212953 - L2 LINE L2 -5 3267 3144 204 204 19 19 chr17 55226320 55226374 -30212106 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 23 33 0 0 chr17 55226455 55226485 -30211995 + AT_rich Low_complexity Low_complexity 1 30 0 629 291 136 67 chr17 55226937 55227532 -30210948 - HAL1 LINE L1 -135 2372 1737 24 0 0 0 chr17 55227600 55227624 -30210856 + AT_rich Low_complexity Low_complexity 1 24 0 424 341 22 14 chr17 55227638 55227776 -30210704 - MIR3 SINE MIR -12 196 58 2065 154 0 3 chr17 55229040 55229351 -30209129 + AluSx SINE Alu 1 310 -2 8357 122 17 7 chr17 55229352 55230627 -30207853 - HSMAR2 DNA Mariner -13 1289 2 249 128 0 0 chr17 55231284 55231331 -30207149 + MER57A LTR ERV1 334 380 -23 2267 107 0 0 chr17 55231348 55231646 -30206834 - AluSc SINE Alu -11 298 1 236 175 35 0 chr17 55231921 55231978 -30206502 + C-rich Low_complexity Low_complexity 3 61 0 1254 194 148 4 chr17 55231978 55232241 -30206239 - AluJb SINE Alu -1 301 1 1039 256 62 54 chr17 55232575 55233076 -30205404 - MLT1D LTR MaLR 0 505 1 314 351 36 65 chr17 55233094 55233342 -30205138 + L2 LINE L2 2258 2498 -816 256 336 189 0 chr17 55233701 55233844 -30204636 - MIR SINE MIR -70 192 23 1932 181 47 18 chr17 55234171 55234552 -30203928 + MSTD LTR MaLR 1 392 -4 514 279 68 47 chr17 55234579 55234769 -30203711 + MIR SINE MIR 7 200 -62 247 246 0 0 chr17 55234778 55234839 -30203641 - L1PA16 LINE L1 -8 7596 7536 11205 226 98 9 chr17 55234840 55239661 -30198819 - L1PA16 LINE L1 -105 7499 2243 245 364 0 0 chr17 55239951 55240050 -30198430 - L1PA16 LINE L1 -5399 2182 2084 937 291 63 58 chr17 55240133 55240754 -30197726 - L1PA16 LINE L1 -6163 1411 788 1051 110 21 0 chr17 55240783 55240928 -30197552 - AluSg/x SINE Alu -17 295 148 2015 121 0 0 chr17 55241028 55241301 -30197179 + AluSx SINE Alu 26 298 -14 276 314 55 51 chr17 55241655 55241891 -30196589 + L3 LINE CR1 668 904 -673 235 312 54 65 chr17 55242016 55242202 -30196278 + MLT1L LTR MaLR 211 394 -221 268 303 62 28 chr17 55242232 55242377 -30196103 + MLT1L LTR MaLR 466 615 0 22 0 0 0 chr17 55242694 55242716 -30195764 + AT_rich Low_complexity Low_complexity 1 22 0 460 391 24 0 chr17 55242759 55242966 -30195514 + MIR SINE MIR 9 220 -42 3536 280 77 22 chr17 55242998 55244418 -30194062 + L2 LINE L2 1282 2778 -536 614 236 9 84 chr17 55244433 55244658 -30193822 + L2 LINE L2 3106 3313 0 1617 210 115 8 chr17 55244860 55245251 -30193229 - MER67D LTR ERV1 -81 433 1 296 353 77 74 chr17 55245876 55246227 -30192253 + L2 LINE L2 2836 3187 -85 271 250 139 0 chr17 55246272 55246344 -30192136 - L2 LINE L2 0 3313 3232 542 280 38 0 chr17 55246562 55246719 -30191761 + MIR SINE MIR 79 241 -21 693 252 73 56 chr17 55246734 55247272 -30191208 + LTR48 LTR ERV1 1 787 0 1833 150 7 14 chr17 55247881 55248194 -30190286 - AluSx SINE Alu 0 312 2 455 270 22 15 chr17 55248378 55248515 -30189965 + MIR SINE MIR 5 142 -120 778 292 46 21 chr17 55249862 55250146 -30188334 + LTR16C LTR ERVL 166 456 -35 351 0 0 0 chr17 55250193 55250232 -30188248 + (CA)n Simple_repeat Simple_repeat 2 40 0 189 338 83 15 chr17 55250244 55250377 -30188103 - L2 LINE L2 -318 2954 2813 35265 107 14 8 chr17 55250788 55256889 -30181591 - L1PA6 LINE L1 -5 6149 11 453 302 134 71 chr17 55256902 55257365 -30181115 - L2 LINE L2 -954 2360 1869 533 249 143 53 chr17 55257488 55257697 -30180783 - MIR SINE MIR -4 258 31 2101 129 3 0 chr17 55257860 55258154 -30180326 + AluSg SINE Alu 1 295 -15 431 69 0 208 chr17 55258394 55258495 -30179985 + MADE1 DNA Mariner 1 80 0 22 0 0 0 chr17 55259159 55259181 -30179299 + AT_rich Low_complexity Low_complexity 1 22 0 457 331 69 18 chr17 55259347 55259679 -30178801 + L1MEc LINE L1 -80 268 -5993 2635 120 0 3 chr17 55259730 55260106 -30178374 + THE1C LTR MaLR 1 375 0 2739 99 3 5 chr17 55260106 55260490 -30177990 + THE1C-int LTR MaLR 1 383 -1197 3264 157 7 28 chr17 55260490 55260584 -30177896 + L1PA16 LINE L1 5561 5655 -523 2385 161 24 5 chr17 55260584 55261001 -30177479 + MSTA LTR MaLR 1 425 -3 3264 157 7 28 chr17 55261001 55261537 -30176943 + L1PA16 LINE L1 5655 6178 0 343 300 88 20 chr17 55261568 55262058 -30176422 + L1MEc LINE L1 782 1343 -4918 543 261 109 35 chr17 55262206 55262598 -30175882 + L1MEc LINE L1 1333 1808 -4453 744 239 96 22 chr17 55262838 55263194 -30175286 + L1MEc LINE L1 1895 2276 -3985 207 0 0 0 chr17 55263357 55263380 -30175100 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 266 352 42 21 chr17 55264264 55264406 -30174074 + MIR3 SINE MIR 63 207 -1 193 195 6 40 chr17 55264599 55264653 -30173827 - MIR SINE MIR -105 103 32 9524 132 44 70 chr17 55265095 55265440 -30173040 - Tigger1 DNA MER2_type 0 2418 2066 294 29 0 0 chr17 55265440 55265475 -30173005 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 9524 132 44 70 chr17 55265475 55265549 -30172931 - Tigger1 DNA MER2_type -352 2066 1992 2228 116 16 0 chr17 55265549 55265852 -30172628 - AluSx SINE Alu -4 308 1 9524 132 44 70 chr17 55265852 55267288 -30171192 - Tigger1 DNA MER2_type -426 1992 610 2365 154 26 7 chr17 55267271 55267686 -30170794 - Tigger1 DNA MER2_type -1970 448 26 * 2948 172 25 28 chr17 55267885 55268497 -30169983 + L1MC2 LINE L1 5681 6290 -54 201 191 0 24 chr17 55268497 55268539 -30169941 + (CATATA)n Simple_repeat Simple_repeat 4 44 0 34536 111 19 10 chr17 55268983 55275092 -30163388 + L1PA6 LINE L1 11 6176 0 397 332 138 24 chr17 55275259 55275635 -30162845 - L2 LINE L2 -56 3257 2839 1562 251 156 18 chr17 55275660 55276159 -30162321 - MLT1G LTR MaLR -22 568 1 246 355 13 0 chr17 55276180 55276256 -30162224 - L2 LINE L2 -508 2806 2730 1513 197 10 23 chr17 55276457 55276766 -30161714 + AluJo SINE Alu 1 305 -7 476 221 15 44 chr17 55276766 55276902 -30161578 - MIR3 SINE MIR -6 202 71 215 298 156 50 chr17 55277020 55277192 -30161288 - MIR SINE MIR -50 212 29 192 323 31 0 chr17 55277957 55278022 -30160458 - L2 LINE L2 -78 3235 3169 743 280 131 49 chr17 55278486 55278935 -30159545 + MLT1H LTR MaLR 22 549 0 387 363 16 8 chr17 55279117 55279241 -30159239 + L2 LINE L2 3143 3267 -5 2108 263 112 60 chr17 55281886 55283256 -30155224 - L1MC4 LINE L1 -140 7902 6461 204 206 48 16 chr17 55283423 55283486 -30154994 + GA-rich Low_complexity Low_complexity 1 65 0 2385 76 3 0 chr17 55284192 55284496 -30153984 + AluY SINE Alu 1 305 -6 1109 218 66 17 chr17 55284496 55284722 -30153758 - MER67D LTR ERV1 -191 323 79 216 0 0 0 chr17 55284722 55284746 -30153734 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 1109 218 66 17 chr17 55284746 55284808 -30153672 - MER67D LTR ERV1 -435 79 21 277 239 14 28 chr17 55285113 55285184 -30153296 + L2 LINE L2 3229 3298 -15 2039 106 0 7 chr17 55285653 55285960 -30152520 - AluSx SINE Alu 0 305 1 411 298 105 45 chr17 55287065 55287418 -30151062 - MLT1L LTR MaLR -227 388 15 555 315 90 76 chr17 55287961 55288606 -30149874 + HAL1 LINE L1 278 931 -1576 610 250 60 104 chr17 55288613 55289125 -30149355 + HAL1 LINE L1 1077 1561 -946 1891 143 39 0 chr17 55289125 55289411 -30149069 + AluSx SINE Alu 1 297 -15 610 250 60 104 chr17 55289411 55289494 -30148986 + HAL1 LINE L1 1561 1646 -861 206 62 31 0 chr17 55290247 55290279 -30148201 + (TA)n Simple_repeat Simple_repeat 1 33 0 268 116 58 29 chr17 55290560 55290629 -30147851 + HAL1 LINE L1 2283 2353 -154 305 288 260 32 chr17 55290856 55290884 -30147596 - L2 LINE L2 -4 3309 3289 2641 104 3 6 chr17 55290884 55291249 -30147231 + THE1B LTR MaLR 1 364 0 10490 108 14 29 chr17 55291249 55292853 -30145627 + THE1B-int LTR MaLR 1 1580 0 2507 110 14 14 chr17 55292853 55293217 -30145263 + THE1B LTR MaLR 1 364 0 305 288 260 32 chr17 55293217 55293436 -30145044 - L2 LINE L2 -23 3290 3003 693 226 0 0 chr17 55293822 55293955 -30144525 + Tigger5 DNA MER2_type 1 133 -2190 448 198 22 11 chr17 55293949 55294040 -30144440 + Tigger5 DNA MER2_type 2232 2323 0 * 270 212 30 0 chr17 55294755 55294821 -30143659 + CT-rich Low_complexity Low_complexity 1 68 0 240 35 0 0 chr17 55294821 55294850 -30143630 + (TAA)n Simple_repeat Simple_repeat 1 29 0 423 314 52 5 chr17 55295209 55295400 -30143080 - MLT1L LTR MaLR -33 582 383 437 150 12 12 chr17 55295529 55295609 -30142871 - MADE1 DNA Mariner 0 80 1 23 0 0 0 chr17 55296227 55296250 -30142230 + AT_rich Low_complexity Low_complexity 1 23 0 1077 180 25 0 chr17 55296642 55296842 -30141638 + MER2 DNA MER2_type 2 206 -139 192 336 61 46 chr17 55296963 55297094 -30141386 + MIR SINE MIR 57 189 -73 230 261 22 65 chr17 55297235 55297327 -30141153 - MIR3 SINE MIR -6 202 115 26 93 0 0 chr17 55297407 55297482 -30140998 + AT_rich Low_complexity Low_complexity 1 75 0 818 31 0 0 chr17 55298888 55299016 -30139464 + AluY SINE Alu 189 316 0 620 205 224 13 chr17 55299947 55300103 -30138377 + MER5A DNA MER1_type 1 189 0 2299 176 16 19 chr17 55301084 55301511 -30136969 + MSTB LTR MaLR 1 426 0 1052 226 129 81 chr17 55305461 55305943 -30132537 + MLT1D LTR MaLR 1 505 0 22 35 0 0 chr17 55306617 55306646 -30131834 + AT_rich Low_complexity Low_complexity 1 29 0 236 250 78 16 chr17 55307444 55307508 -30130972 + L2 LINE L2 3204 3271 -1 6386 150 8 9 chr17 55308020 55308178 -30130302 - L1MA3 LINE L1 -11 7713 7556 1749 150 0 4 chr17 55308178 55308438 -30130042 - AluSx SINE Alu -18 294 36 6386 150 8 9 chr17 55308438 55309687 -30128793 - L1MA3 LINE L1 -168 7556 6308 * 14157 169 29 26 chr17 55309682 55309743 -30128737 - L1MA3 LINE L1 -4930 2635 2576 2203 102 0 0 chr17 55309743 55310028 -30128452 - AluSg SINE Alu -25 285 1 14157 169 29 26 chr17 55310028 55311505 -30126975 - L1MA3 LINE L1 -4989 2576 1082 2058 126 20 7 chr17 55311505 55311799 -30126681 - AluSx SINE Alu -14 298 1 14157 169 29 26 chr17 55311799 55312875 -30125605 - L1MA3 LINE L1 -6483 1082 11 189 0 0 0 chr17 55312921 55312942 -30125538 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 231 295 39 62 chr17 55313907 55314024 -30124456 + MIR3 SINE MIR 30 145 -63 2089 131 0 0 chr17 55314024 55314314 -30124166 + AluSx SINE Alu 1 290 -22 231 295 39 62 chr17 55314314 55314325 -30124155 + MIR3 SINE MIR 145 155 -53 603 307 67 27 chr17 55314417 55314642 -30123838 - MIR SINE MIR -26 236 3 269 254 45 18 chr17 55314648 55314758 -30123722 + MER103 DNA DNA 41 153 -13 1584 163 14 38 chr17 55315164 55315474 -30123006 - AluJb SINE Alu 0 303 1 2045 167 37 20 chr17 55315766 55316168 -30122312 - L1PA16 LINE L1 -16 6150 5742 2197 127 33 30 chr17 55317817 55318180 -30120300 - THE1B LTR MaLR 0 364 1 1347 92 85 68 chr17 55318337 55318451 -30120029 - L1MA8 LINE L1 -3 6288 6178 2221 79 35 0 chr17 55318451 55318620 -30119860 - AluY SINE Alu -11 300 115 261 0 0 0 chr17 55318620 55318649 -30119831 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2221 79 35 0 chr17 55318649 55318769 -30119711 - AluY SINE Alu -196 115 1 1347 92 85 68 chr17 55318769 55318935 -30119545 - L1MA8 LINE L1 -113 6178 6003 2234 224 27 63 chr17 55319154 55319901 -30118579 - L1MC4a LINE L1 -1655 6153 5434 309 291 103 30 chr17 55320621 55320824 -30117656 + HAL1 LINE L1 817 1034 -1473 1050 178 0 0 chr17 55320880 55321065 -30117415 - L1MA7 LINE L1 -313 5978 5794 1237 114 39 5 chr17 55321119 55321366 -30117114 - L1MA7 LINE L1 -748 5398 5226 * 1446 184 81 3 chr17 55321363 55321683 -30116797 + L1MA9 LINE L1 5968 6312 0 309 332 83 18 chr17 55321683 55321960 -30116520 + L1MEd LINE L1 940 1234 -4885 406 368 9 32 chr17 55322076 55322296 -30116184 + HAL1 LINE L1 1513 1727 -780 318 275 16 49 chr17 55322318 55322562 -30115918 - HAL1b LINE L1 -926 422 187 7433 178 52 7 chr17 55322794 55324506 -30113974 - L1M2 LINE L1 -688 5603 3817 850 316 83 51 chr17 55324536 55324748 -30113732 + L2 LINE L2 2319 2523 -790 2898 136 107 37 chr17 55324748 55325320 -30113160 - LTR9 LTR ERV1 0 612 1 850 316 83 51 chr17 55325320 55325848 -30112632 + L2 LINE L2 2523 3089 -224 22 0 0 0 chr17 55326162 55326184 -30112296 + AT_rich Low_complexity Low_complexity 1 22 0 1955 173 47 32 chr17 55326336 55326861 -30111619 + MLT2A2 LTR ERVL 2 535 -19 422 208 21 10 chr17 55326866 55326971 -30111509 - L1ME1 LINE L1 -5 6159 6054 424 259 35 17 chr17 55326984 55327100 -30111380 - L1ME1 LINE L1 -155 6011 5894 * 730 230 56 0 chr17 55327083 55327279 -30111201 - L1ME1 LINE L1 -898 5248 5042 913 242 27 9 chr17 55327284 55327503 -30110977 - MLT1D LTR MaLR -280 225 3 371 262 19 9 chr17 55327582 55327689 -30110791 + L1MEc LINE L1 167 274 -6122 560 333 65 17 chr17 55328625 55328856 -30109624 + MIR SINE MIR 11 252 -10 457 316 44 13 chr17 55329448 55329606 -30108874 - MIR SINE MIR -64 198 36 384 97 0 0 chr17 55329952 55330014 -30108466 + (TG)n Simple_repeat Simple_repeat 2 63 0 721 210 92 36 chr17 55330205 55330400 -30108080 - MER3 DNA MER1_type -3 206 1 216 0 0 0 chr17 55332680 55332704 -30105776 + (T)n Simple_repeat Simple_repeat 1 24 0 1048 261 128 57 chr17 55333982 55334521 -30103959 - MLT1F1 LTR MaLR -2 565 5 2098 112 0 0 chr17 55334522 55334834 -30103646 + AluSx SINE Alu 1 312 0 276 100 0 0 chr17 55335806 55335846 -30102634 + (TG)n Simple_repeat Simple_repeat 1 40 0 257 220 0 0 chr17 55336405 55336455 -30102025 + HsTC2 DNA Tc2 824 873 -1025 2405 69 7 10 chr17 55337206 55337509 -30100971 + AluY SINE Alu 1 302 -9 1168 239 51 62 chr17 55337608 55338077 -30100403 + MLT2C2 LTR ERVL 1 464 0 25 75 0 0 chr17 55338503 55338556 -30099924 + AT_rich Low_complexity Low_complexity 1 53 0 195 381 106 21 chr17 55338651 55338887 -30099593 - L2 LINE L2 -50 3222 2967 1139 78 0 0 chr17 55339842 55339984 -30098496 - AluY SINE Alu -7 304 163 1973 241 52 34 chr17 55340268 55340883 -30097597 + MLT1E2 LTR MaLR 1 626 0 23 0 0 0 chr17 55341595 55341618 -30096862 + AT_rich Low_complexity Low_complexity 1 23 0 332 202 11 56 chr17 55341668 55341757 -30096723 - L2 LINE L2 -47 3266 3182 961 181 19 0 chr17 55342536 55342696 -30095784 + AluJb SINE Alu 1 163 -149 2461 143 42 0 chr17 55342696 55343082 -30095398 + LTR3 LTR ERVK 6 407 -25 691 243 0 7 chr17 55343082 55343226 -30095254 + AluJb SINE Alu 163 305 -7 249 293 24 78 chr17 55344186 55344353 -30094127 - MIR SINE MIR 0 262 105 * 1557 303 112 16 chr17 55344343 55344971 -30093509 - L2 LINE L2 -420 2894 2207 304 266 13 25 chr17 55345117 55345196 -30093284 - L2 LINE L2 -9 3263 3186 917 271 39 15 chr17 55345867 55346269 -30092211 + MLT2F LTR ERVL 1 457 -206 5954 182 28 17 chr17 55346272 55347505 -30090975 - L1MC3 LINE L1 -1 7784 6538 719 217 12 24 chr17 55347505 55347671 -30090809 + MLT2F LTR ERVL 440 603 -60 564 181 14 9 chr17 55347714 55347944 -30090536 + (TA)n Simple_repeat Simple_repeat 1 231 0 1126 273 55 11 chr17 55347987 55348425 -30090055 - MER90 LTR ERV1 -66 548 22 183 186 0 0 chr17 55348459 55348502 -30089978 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 3035 238 25 37 chr17 55348529 55349349 -30089131 + MER21B LTR ERV1 12 911 -20 6965 239 20 32 chr17 55349366 55351022 -30087458 + MER21B-int LTR ERV1 2 1637 -2554 761 244 0 0 chr17 55351099 55351259 -30087221 + MER21B-int LTR ERV1 1638 1797 -2394 5643 216 23 17 chr17 55351330 55352541 -30085939 + MER21-int LTR ERV1 1677 2894 -1297 351 264 0 0 chr17 55352537 55352628 -30085852 + MER21-int LTR ERV1 468 558 -3633 * 2415 237 16 18 chr17 55352646 55353219 -30085261 + MER21-int LTR ERV1 2891 3462 -729 258 241 0 0 chr17 55353222 55353280 -30085200 + MLT2F LTR ERVL 606 663 0 427 383 11 6 chr17 55353751 55353931 -30084549 + MIR3 SINE MIR 16 196 -12 426 275 78 20 chr17 55354515 55354675 -30083805 + MIR SINE MIR 27 194 -60 870 239 64 30 chr17 55354924 55355188 -30083292 - L1MB8 LINE L1 -6 6172 5900 994 188 32 4 chr17 55355707 55356028 -30082452 + MLT1A1 LTR MaLR 1 355 -10 248 0 31 0 chr17 55356242 55356274 -30082206 + (TA)n Simple_repeat Simple_repeat 1 33 0 439 245 7 86 chr17 55356376 55356515 -30081965 - L2 LINE L2 0 3313 3186 272 333 44 31 chr17 55356605 55356764 -30081716 - MER5B DNA MER1_type -7 171 11 2535 136 82 13 chr17 55356857 55357335 -30081145 + MER9 LTR ERVK 1 511 0 533 264 114 12 chr17 55357670 55357837 -30080643 + LTR33 LTR ERVL 1 184 -337 520 243 173 22 chr17 55357933 55358118 -30080362 + LTR33 LTR ERVL 309 521 0 414 307 67 6 chr17 55358174 55358353 -30080127 + MIR SINE MIR 21 210 -52 232 165 24 59 chr17 55358377 55358462 -30080018 + L1MC5 LINE L1 7831 7912 -49 2020 148 23 0 chr17 55360191 55360496 -30077984 + AluSx SINE Alu 1 312 0 1556 174 9 32 chr17 55361457 55361836 -30076644 - MER4A LTR ERV1 0 664 261 568 144 21 10 chr17 55361836 55361933 -30076547 - MER4A LTR ERV1 -566 98 1 3731 223 8 27 chr17 55361995 55362734 -30075746 + L1M1 LINE L1 923 1647 -5918 6319 109 41 15 chr17 55362735 55363650 -30074830 + L1MA3 LINE L1 5254 6200 -105 1838 141 147 11 chr17 55363650 55364025 -30074455 + MSTA LTR MaLR 3 428 0 6319 109 41 15 chr17 55364025 55364134 -30074346 + L1MA3 LINE L1 6200 6305 0 331 281 45 73 chr17 55364366 55364654 -30073826 - L1ME1 LINE L1 -224 5942 5663 2327 60 0 0 chr17 55364654 55364983 -30073497 + AluY SINE Alu 1 329 0 331 281 45 73 chr17 55364983 55365047 -30073433 - L1ME1 LINE L1 -503 5663 5599 1856 166 30 0 chr17 55365159 55365508 -30072972 - AluSx SINE Alu 0 359 2 440 348 43 11 chr17 55365852 55366036 -30072444 + MIR SINE MIR 16 205 -57 2097 96 0 0 chr17 55366148 55366418 -30072062 + AluSg SINE Alu 34 303 -7 231 239 109 43 chr17 55367332 55367424 -30071056 + L2 LINE L2 2709 2806 -508 297 255 41 20 chr17 55368732 55368830 -30069650 - MIR3 SINE MIR -48 160 61 230 387 8 32 chr17 55368864 55368988 -30069492 - MIR SINE MIR -102 160 40 23 33 0 0 chr17 55369019 55369049 -30069431 + AT_rich Low_complexity Low_complexity 1 30 0 280 0 0 0 chr17 55369351 55369382 -30069098 + (TTTG)n Simple_repeat Simple_repeat 2 128 0 2246 73 0 14 chr17 55369382 55369668 -30068812 - AluY SINE Alu -29 282 1 29 47 0 0 chr17 55370000 55370043 -30068437 + AT_rich Low_complexity Low_complexity 1 43 0 258 228 29 37 chr17 55370089 55370207 -30068273 - HAL1b LINE L1 -82 1266 1153 21 0 0 0 chr17 55371085 55371106 -30067374 + AT_rich Low_complexity Low_complexity 1 21 0 191 321 139 36 chr17 55371379 55371516 -30066964 - MER5B DNA MER1_type -7 171 21 2126 96 4 7 chr17 55373598 55373900 -30064580 + AluSx SINE Alu 6 306 0 1627 264 31 32 chr17 55373970 55374556 -30063924 + L1MD2 LINE L1 4051 4635 -1511 2691 252 38 18 chr17 55374592 55374898 -30063582 + L1MD2 LINE L1 5128 5426 -933 2034 128 3 0 chr17 55374898 55375220 -30063260 + AluSp SINE Alu 1 323 0 2691 252 38 18 chr17 55375220 55375893 -30062587 + L1MD2 LINE L1 5426 6132 -227 1898 117 84 0 chr17 55376718 55376992 -30061488 - AluSg SINE Alu -13 297 1 202 300 0 0 chr17 55377335 55377385 -30061095 - L2 LINE L2 -27 3245 3196 1732 169 9 36 chr17 55377386 55377717 -30060763 + MLT1B LTR MaLR 3 324 -66 192 250 44 29 chr17 55378307 55378375 -30060105 + MIR3 SINE MIR 136 204 -4 28 0 0 0 chr17 55378532 55378560 -30059920 + AT_rich Low_complexity Low_complexity 1 28 0 208 376 97 18 chr17 55378572 55378737 -30059743 - L2 LINE L2 -308 3005 2828 2372 94 3 3 chr17 55378752 55379082 -30059398 + L1PA8 LINE L1 5843 6172 0 26 0 0 0 chr17 55380426 55380452 -30058028 + AT_rich Low_complexity Low_complexity 1 26 0 248 308 11 0 chr17 55380454 55380545 -30057935 - L1ME4a LINE L1 -67 6054 5963 * 369 300 54 45 chr17 55380530 55380779 -30057701 - L1ME4a LINE L1 -537 5584 5353 255 333 42 0 chr17 55381331 55381475 -30057005 - L1MC4a LINE L1 -1882 5926 5777 36 0 0 0 chr17 55381476 55381512 -30056968 + AT_rich Low_complexity Low_complexity 1 36 0 5844 176 17 13 chr17 55381713 55383733 -30054747 - L1MA4A LINE L1 -12 6993 4959 1006 136 9 28 chr17 55383731 55383944 -30054536 - L1MA4A LINE L1 -3997 2852 2644 * 2119 223 24 0 chr17 55383956 55384377 -30054103 - LTR24 LTR ERV1 -30 437 7 518 214 19 0 chr17 55384401 55384504 -30053976 - MER67C LTR ERV1 -441 269 165 1223 117 37 0 chr17 55384504 55384692 -30053788 + AluSp SINE Alu 112 306 -7 229 213 62 50 chr17 55384701 55384781 -30053699 - MER67C LTR ERV1 -578 132 52 1723 173 0 20 chr17 55384825 55385120 -30053360 - AluJo SINE Alu -23 289 1 4209 80 35 7 chr17 55385515 55386485 -30051995 + MER11A LTR ERVK 129 1266 0 9993 230 53 42 chr17 55389224 55391683 -30046797 - L1MA4A LINE L1 -4191 2658 173 450 259 117 131 chr17 55391936 55392493 -30045987 - MLT1H LTR MaLR 0 549 1 29 84 0 0 chr17 55392514 55392585 -30045895 + AT_rich Low_complexity Low_complexity 1 71 0 1387 227 106 44 chr17 55392699 55393218 -30045262 + L1ME LINE L1 5255 5805 -357 337 243 21 116 chr17 55393343 55393532 -30044948 + L1M4 LINE L1 3629 3799 -2347 186 185 111 0 chr17 55394086 55394140 -30044340 + MER5A DNA MER1_type 80 139 -50 2622 79 22 5 chr17 55394147 55394515 -30043965 - L1PA11 LINE L1 -1 6173 5800 2011 75 4 0 chr17 55394746 55394998 -30043482 - AluY SINE Alu -58 253 1 1139 260 120 20 chr17 55395002 55395402 -30043078 - MLT1J LTR MaLR -71 440 1 403 289 95 37 chr17 55395578 55395768 -30042712 - MIR SINE MIR 0 262 62 202 111 83 0 chr17 55396074 55396110 -30042370 - MIR SINE MIR -113 149 111 2313 102 0 0 chr17 55396729 55397032 -30041448 - AluSx SINE Alu -7 305 3 337 180 281 36 chr17 55397367 55397506 -30040974 - L2 LINE L2 -9 3263 3091 640 239 23 93 chr17 55397990 55398249 -30040231 + L2 LINE L2 3073 3313 0 1189 99 6 39 chr17 55398453 55398635 -30039845 - AluSg/x SINE Alu 0 310 135 2332 89 0 35 chr17 55398635 55398949 -30039531 - AluSq SINE Alu -10 303 1 1882 157 7 0 chr17 55400909 55401208 -30037272 - AluSx SINE Alu -7 305 5 693 186 0 0 chr17 55401490 55401608 -30036872 - AluJb SINE Alu -14 298 181 324 339 63 0 chr17 55401840 55401967 -30036513 + L2 LINE L2 2415 2549 -765 244 284 149 36 chr17 55402069 55402291 -30036189 + L1MC4a LINE L1 6055 6301 -1507 1014 206 25 5 chr17 55402544 55402743 -30035737 + L1MC4a LINE L1 6620 6822 -986 21 0 0 0 chr17 55402890 55402911 -30035569 + AT_rich Low_complexity Low_complexity 1 21 0 1427 181 67 117 chr17 55403058 55403655 -30034825 - LTR49 LTR ERV1 -24 571 5 242 121 0 0 chr17 55403626 55403659 -30034821 - MER34B LTR ERV1 -532 33 1 * 31 0 0 0 chr17 55403903 55403934 -30034546 + AT_rich Low_complexity Low_complexity 1 31 0 844 133 0 0 chr17 55403975 55404095 -30034385 - FLAM_C SINE Alu -11 122 3 1110 175 47 1 chr17 55404303 55404532 -30033948 + L1MDa LINE L1 1702 1919 -4507 936 178 64 23 chr17 55405035 55405254 -30033226 + L1PB4 LINE L1 5924 6151 -5 1227 134 31 0 chr17 55405267 55405491 -30032989 + L1MDa LINE L1 1061 1291 -5135 279 91 55 18 chr17 55405473 55405528 -30032952 + L1MDa LINE L1 1899 1955 -4471 * 267 275 130 0 chr17 55405686 55405755 -30032725 + MIR3 SINE MIR 104 181 -27 253 312 29 68 chr17 55405790 55405995 -30032485 + L3 LINE CR1 1299 1495 -82 215 332 37 24 chr17 55406047 55406149 -30032331 + MIR SINE MIR 1 108 -100 41 66 0 0 chr17 55406188 55406264 -30032216 + AT_rich Low_complexity Low_complexity 1 76 0 237 339 46 31 chr17 55406753 55406883 -30031597 - L2 LINE L2 -183 3089 2958 1253 193 91 30 chr17 55407073 55407404 -30031076 + L1MD2 LINE L1 6008 6358 -1 14636 175 18 6 chr17 55457477 55461017 -29977463 + L1PB1 LINE L1 2205 5797 -354 510 61 0 0 chr17 55461017 55461083 -29977397 + (TA)n Simple_repeat Simple_repeat 2 67 0 14636 175 18 6 chr17 55461083 55461442 -29977038 + L1PB1 LINE L1 5797 6150 -1 30 45 0 0 chr17 55461442 55461486 -29976994 + AT_rich Low_complexity Low_complexity 1 44 0 228 304 98 20 chr17 55461486 55461588 -29976892 - MIR SINE MIR -152 110 1 300 111 0 0 chr17 55462164 55462209 -29976271 + (CA)n Simple_repeat Simple_repeat 2 46 0 760 279 25 0 chr17 55462522 55462749 -29975731 + MIR SINE MIR 30 262 0 282 348 34 0 chr17 55463626 55463715 -29974765 + MIR SINE MIR 24 115 -147 278 331 126 36 chr17 55463717 55463984 -29974496 - L3 LINE CR1 -103 1474 1180 1934 161 0 10 chr17 55463984 55464288 -29974192 - AluJo SINE Alu -11 301 1 191 88 29 0 chr17 55464389 55464423 -29974057 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 2194 99 0 0 chr17 55465878 55466151 -29972329 + AluSq SINE Alu 9 281 -32 1167 48 0 0 chr17 55466156 55466302 -29972178 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 213 39 0 0 chr17 55466301 55466327 -29972153 + (GAAAA)n Simple_repeat Simple_repeat 2 27 0 * 243 327 10 50 chr17 55466348 55466449 -29972031 - L2 LINE L2 -42 3230 3134 929 210 0 0 chr17 55466793 55466955 -29971525 + AluJb SINE Alu 135 296 -16 22 0 0 0 chr17 55467098 55467120 -29971360 + AT_rich Low_complexity Low_complexity 1 22 0 695 181 24 16 chr17 55467528 55467655 -29970825 - FLAM_C SINE Alu -2 131 4 352 281 30 24 chr17 55468519 55468538 -29969942 - L1MA10 LINE L1 -1 6333 6315 742 276 50 23 chr17 55468538 55468799 -29969681 - L1ME2 LINE L1 -9 6155 5888 * 2201 250 83 57 chr17 55468798 55468834 -29969646 - L1ME LINE L1 -4818 1262 1228 2143 126 59 8 chr17 55468834 55469191 -29969289 - THE1C LTR MaLR 0 375 1 2201 250 83 57 chr17 55469191 55470396 -29968084 - L1ME LINE L1 -4852 1228 6 567 282 40 6 chr17 55471032 55471206 -29967274 + MIR SINE MIR 83 262 0 487 323 9 53 chr17 55471161 55471387 -29967093 - MIR SINE MIR -32 230 15 * 698 334 116 15 chr17 55472102 55472506 -29965974 - L3 LINE CR1 -167 1410 966 22 0 0 0 chr17 55472562 55472584 -29965896 + AT_rich Low_complexity Low_complexity 1 22 0 18150 122 13 99 chr17 55472619 55476281 -29962199 + L1P LINE L1 2 3347 -2799 1006 127 99 151 chr17 55476281 55476573 -29961907 + LTR12 LTR ERV1 6 282 -432 327 237 14 5 chr17 55476573 55476675 -29961805 + LTR30 LTR ERV1 375 642 -80 621 129 11 0 chr17 55476675 55476768 -29961712 + LTR12 LTR ERV1 621 714 0 6650 144 7 16 chr17 55476768 55477870 -29960610 + LTR12-int LTR ERV1 2 1125 -6853 6696 68 9 3 chr17 55477871 55478972 -29959508 + L1PA7 LINE L1 5048 6152 -2 234 0 0 0 chr17 55479583 55479609 -29958871 + (CA)n Simple_repeat Simple_repeat 2 27 0 192 308 22 22 chr17 55480432 55480523 -29957957 + L3 LINE CR1 1328 1418 -159 288 347 54 24 chr17 55480661 55480828 -29957652 + MER5A DNA MER1_type 12 183 -6 1903 133 28 5 chr17 55481620 55481940 -29956540 + THE1C LTR MaLR 1 355 0 406 383 23 6 chr17 55482231 55482406 -29956074 + MIR3 SINE MIR 19 196 -12 357 321 101 34 chr17 55482730 55483137 -29955343 + L1ME LINE L1 4591 5034 -1112 841 293 16 6 chr17 55483506 55483817 -29954663 + L1ME LINE L1 5348 5661 -2147 332 297 4 0 chr17 55483827 55483956 -29954524 + L1ME LINE L1 5704 5838 -299 6638 58 8 0 chr17 55484969 55486307 -29952173 - L1PA8 LINE L1 -6 6166 4811 265 301 81 24 chr17 55486435 55486558 -29951922 - MIR SINE MIR -110 152 23 656 275 6 0 chr17 55486910 55487081 -29951399 + MLT1B LTR MaLR 2 173 -217 684 87 0 0 chr17 55487142 55487234 -29951246 + L1PA8 LINE L1 6028 6119 -53 1036 60 146 0 chr17 55487247 55487398 -29951082 - L1PA8 LINE L1 -252 5920 5748 1101 151 22 0 chr17 55487398 55487577 -29950903 + MLT1B LTR MaLR 206 388 -2 27 62 0 0 chr17 55489501 55489549 -29948931 + AT_rich Low_complexity Low_complexity 1 48 0 2559 144 7 29 chr17 55489552 55489996 -29948484 + MER57B LTR ERV1 1 434 0 3682 175 50 6 chr17 55489996 55490659 -29947821 + MER57B-int LTR ERV1 1 692 -6845 * 7068 136 55 33 chr17 55490647 55491462 -29947018 + MER57B-int LTR ERV1 298 1094 -5630 1889 99 10 61 chr17 55491462 55491756 -29946724 - AluSq SINE Alu -19 294 16 7068 136 55 33 chr17 55491756 55491924 -29946556 + MER57B-int LTR ERV1 1094 1257 -5467 225 0 0 0 chr17 55491924 55491949 -29946531 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7068 136 55 33 chr17 55491949 55493951 -29944529 + MER57B-int LTR ERV1 1257 5004 -1720 859 113 27 27 chr17 55493950 55494100 -29944380 + MER57B-int LTR ERV1 5249 5398 -2139 * 569 58 0 0 chr17 55494143 55494229 -29944251 + L1P LINE L1 3222 3307 -2839 2083 125 3 0 chr17 55494229 55494524 -29943956 + MER57B-int LTR ERV1 6852 7147 -390 652 163 24 8 chr17 55494524 55494647 -29943833 + LTR54B LTR ERV1 3 127 -371 1437 92 171 4 chr17 55494647 55494875 -29943605 + MER57B-int LTR ERV1 7272 7537 0 2459 150 16 2 chr17 55494876 55495303 -29943177 + MER57B LTR ERV1 2 434 0 2133 129 0 3 chr17 55495428 55495738 -29942742 + AluSc SINE Alu 1 309 0 1213 258 243 5 chr17 55495842 55496477 -29942003 - L2 LINE L2 -241 3072 2295 1219 184 72 72 chr17 55496494 55496798 -29941682 + MER67D LTR ERV1 1 304 -210 205 300 0 0 chr17 55496863 55496913 -29941567 - L2 LINE L2 -1046 2268 2219 1930 177 44 28 chr17 55497135 55497565 -29940915 + LTR23 LTR ERV1 1 437 0 26 0 0 0 chr17 55498043 55498069 -29940411 + AT_rich Low_complexity Low_complexity 1 26 0 25837 111 11 17 chr17 55499263 55503214 -29935266 - L1P LINE L1 -2207 3939 11 194 375 21 56 chr17 55503328 55503472 -29935008 + MER5A DNA MER1_type 13 151 -38 395 358 43 0 chr17 55503718 55503880 -29934600 - MIR3 SINE MIR -12 196 28 510 289 100 11 chr17 55504388 55504578 -29933902 + L2 LINE L2 1825 2031 -1283 1282 155 78 16 chr17 55504581 55504826 -29933654 + MLT2D LTR ERVL 1 260 -154 457 297 138 0 chr17 55505176 55505314 -29933166 + MER5A DNA MER1_type 10 166 -23 349 294 88 62 chr17 55505433 55505627 -29932853 - MIR SINE MIR -40 222 24 476 318 41 32 chr17 55505954 55506174 -29932306 + MIR SINE MIR 40 261 -1 320 259 35 12 chr17 55506176 55506261 -29932219 + MIR3 SINE MIR 105 191 -17 2354 61 0 24 chr17 55507285 55507565 -29930915 + AluSg SINE Alu 1 275 -35 356 0 23 0 chr17 55507565 55507609 -29930871 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 2354 61 0 24 chr17 55507609 55507621 -29930859 + AluSg SINE Alu 275 286 -24 195 377 0 26 chr17 55507977 55508054 -29930426 - MIR SINE MIR -184 78 4 3155 216 58 11 chr17 55508080 55508980 -29929500 + Charlie1 DNA MER1_type 1820 2761 0 242 304 78 10 chr17 55508993 55509095 -29929385 + L1M4 LINE L1 4735 4843 -1303 1176 282 49 15 chr17 55509139 55509529 -29928951 - LTR33 LTR ERVL 0 521 119 356 326 59 7 chr17 55509640 55509775 -29928705 - ERVL LTR ERVL -2235 3529 3388 1022 215 148 43 chr17 55509842 55510167 -29928313 + MLT1A1 LTR MaLR 7 365 0 377 300 47 13 chr17 55510295 55510445 -29928035 - ERVL LTR ERVL -4011 1753 1599 320 282 176 6 chr17 55510445 55510615 -29927865 + L1ME LINE L1 691 889 -5181 346 302 47 23 chr17 55510836 55511008 -29927472 - HAL1 LINE L1 -615 1892 1717 1851 164 0 10 chr17 55511043 55511341 -29927139 - AluJo SINE Alu -17 295 1 259 230 30 135 chr17 55511427 55511627 -29926853 - L1MDa LINE L1 -4853 1227 1049 323 246 106 63 chr17 55511762 55511969 -29926511 - L1MDa LINE L1 -5217 853 638 1373 272 123 48 chr17 55512585 55513540 -29924940 - HAL1 LINE L1 -882 1625 600 966 314 97 2 chr17 55513608 55514031 -29924449 - HAL1 LINE L1 -2044 463 1 2103 109 0 3 chr17 55514407 55514725 -29923755 + AluSx SINE Alu 1 317 0 2205 104 10 0 chr17 55516847 55517144 -29921336 + AluSp SINE Alu 1 300 -13 382 267 220 0 chr17 55518070 55518220 -29920260 + MIR SINE MIR 36 218 -44 312 302 54 23 chr17 55518220 55518349 -29920131 + MIR SINE MIR 128 260 -2 271 295 98 12 chr17 55518464 55518637 -29919843 - L1ME LINE L1 -364 5757 5570 2039 145 3 3 chr17 55518847 55519150 -29919330 + AluSq SINE Alu 1 303 -10 198 281 42 42 chr17 55519280 55519376 -29919104 - L3 LINE CR1 -373 1204 1109 841 253 86 0 chr17 55519945 55520131 -29918349 + MER63A DNA MER1_type 7 208 -2 207 333 0 0 chr17 55521255 55521330 -29917150 - MIR SINE MIR -4 258 184 209 252 36 81 chr17 55521479 55521590 -29916890 - MER5A DNA MER1_type -73 116 11 347 290 120 37 chr17 55521963 55522180 -29916300 + MIR SINE MIR 19 253 -9 272 168 62 62 chr17 55522838 55523017 -29915463 + (TA)n Simple_repeat Simple_repeat 2 180 0 274 163 47 39 chr17 55523073 55523202 -29915278 + (TA)n Simple_repeat Simple_repeat 2 131 0 * 320 291 29 11 chr17 55523163 55523338 -29915142 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 * 496 246 11 6 chr17 55523219 55523460 -29915020 + (TA)n Simple_repeat Simple_repeat 1 242 0 285 276 112 10 chr17 55523511 55523609 -29914871 - MER5B DNA MER1_type -69 109 2 1361 211 19 72 chr17 55523681 55524056 -29914424 - MLT1A2 LTR MaLR -15 359 5 245 196 18 18 chr17 55524867 55524923 -29913557 + (TG)n Simple_repeat Simple_repeat 1 56 0 345 24 0 0 chr17 55525106 55525148 -29913332 + (CA)n Simple_repeat Simple_repeat 2 43 0 229 284 124 20 chr17 55526941 55527060 -29911420 + MIR SINE MIR 37 145 -63 768 244 60 84 chr17 55528149 55528399 -29910081 - MIR SINE MIR -13 249 6 391 340 42 37 chr17 55528588 55528829 -29909651 - MIR SINE MIR -14 248 7 181 400 109 0 chr17 55528975 55529085 -29909395 - L2 LINE L2 -15 3257 3136 230 329 0 13 chr17 55530052 55530131 -29908349 - MLT1L LTR MaLR -324 291 214 1615 246 31 41 chr17 55530504 55531012 -29907468 + MLT1D LTR MaLR 1 503 -2 349 306 94 6 chr17 55533150 55533320 -29905160 - MIR SINE MIR -3 259 75 862 94 8 0 chr17 55533472 55533589 -29904891 - THE1B LTR MaLR 0 364 247 243 374 11 0 chr17 55533590 55533681 -29904799 + MIR3 SINE MIR 102 193 -15 949 208 56 14 chr17 55534019 55534235 -29904245 + Charlie1 DNA MER1_type 3 227 -2534 523 259 7 7 chr17 55534232 55534371 -29904109 + Charlie1 DNA MER1_type 2623 2761 0 * 1667 198 96 3 chr17 55534398 55534732 -29903748 - MLT1A1 LTR MaLR 0 365 1 233 243 15 96 chr17 55534971 55535107 -29903373 - MER104 DNA Tc2 -9 171 47 1983 114 7 40 chr17 55535169 55535468 -29903012 - AluSx SINE Alu -23 289 1 2585 100 17 0 chr17 55535688 55536048 -29902432 - L1PA10 LINE L1 -359 5809 5444 2177 110 59 3 chr17 55536048 55536391 -29902089 + L1PA10 LINE L1 5793 6166 -2 27 0 0 0 chr17 55536398 55536425 -29902055 + AT_rich Low_complexity Low_complexity 1 27 0 406 328 28 17 chr17 55537939 55538116 -29900364 - MIR SINE MIR -50 212 34 398 291 120 19 chr17 55538299 55538457 -29900023 - MIR SINE MIR -11 251 78 803 192 4 100 chr17 55538538 55538721 -29899759 + MER33 DNA MER1_type 1 157 -2428 1971 68 4 0 chr17 55538721 55538971 -29899509 - L1PA8 LINE L1 -10 6162 5912 803 192 4 100 chr17 55538971 55539027 -29899453 + MER33 DNA MER1_type 157 217 -107 1586 193 29 32 chr17 55539027 55539369 -29899111 + Tigger1 DNA MER2_type 1 341 -2077 349 77 19 0 chr17 55539367 55539419 -29899061 + Tigger1 DNA MER2_type 840 892 -1526 * 9263 119 17 27 chr17 55539519 55540643 -29897837 + Tigger1 DNA MER2_type 940 2047 -371 2446 88 0 0 chr17 55540643 55540949 -29897531 + AluSg SINE Alu 1 306 -4 9263 119 17 27 chr17 55540949 55541318 -29897162 + Tigger1 DNA MER2_type 2047 2418 0 896 264 67 39 chr17 55541325 55541681 -29896799 + MER110A-int LTR ERV1 4279 4644 -3 259 164 148 0 chr17 55541753 55541814 -29896666 + MER110A LTR ERV1 1 70 -398 609 289 55 55 chr17 55541975 55542097 -29896383 + MER110 LTR ERV1 201 322 -169 1906 148 0 0 chr17 55542097 55542420 -29896060 + AluSx SINE Alu 1 323 0 609 289 55 55 chr17 55542420 55542585 -29895895 + MER110 LTR ERV1 321 491 0 350 191 162 29 chr17 55542749 55542854 -29895626 + Charlie8 DNA MER1_type 78 196 -2221 820 214 0 0 chr17 55542940 55543094 -29895386 - MER58A DNA MER1_type -25 199 46 1416 205 4 0 chr17 55543726 55543985 -29894495 + AluJo SINE Alu 1 260 -52 359 295 145 44 chr17 55545427 55545654 -29892826 - MIR SINE MIR 0 262 13 519 113 9 35 chr17 55545845 55545960 -29892520 + L1MA7 LINE L1 6180 6291 0 345 304 17 9 chr17 55547910 55548025 -29890455 + MIR SINE MIR 91 206 -56 228 273 0 0 chr17 55548249 55548326 -29890154 + CT-rich Low_complexity Low_complexity 3 79 0 583 264 47 31 chr17 55548546 55548739 -29889741 + MIR SINE MIR 57 252 -10 905 307 81 29 chr17 55548861 55549775 -29888705 - L1ME3A LINE L1 -238 5932 4979 25679 140 15 14 chr17 55549946 55556077 -29882403 - L1PA8A LINE L1 -5 6441 259 373 200 0 30 chr17 55556079 55556179 -29882301 - MER6 DNA MER2_type -434 431 335 1444 126 40 0 chr17 55556179 55556401 -29882079 - L1PA8A LINE L1 -5643 232 2 357 178 10 20 chr17 55556405 55556421 -29882059 + (TA)n Simple_repeat Simple_repeat 2 17 -84 4266 172 52 20 chr17 55556421 55557259 -29881221 - MER6 DNA MER2_type 0 865 1 357 178 10 20 chr17 55557259 55557343 -29881137 + (TA)n Simple_repeat Simple_repeat 17 101 0 243 333 15 0 chr17 55557780 55557846 -29880634 + L2 LINE L2 3247 3313 0 663 269 98 19 chr17 55559199 55559455 -29879025 - LTR16A1 LTR ERVL 0 457 182 292 222 40 71 chr17 55559475 55559574 -29878906 + LTR48B LTR ERV1 6 101 -543 * 987 220 131 62 chr17 55559547 55559966 -29878514 + MER39 LTR ERV1 260 707 0 251 310 23 35 chr17 55559989 55560076 -29878404 - LTR16A1 LTR ERVL -312 145 60 28 29 0 0 chr17 55561064 55561099 -29877381 + AT_rich Low_complexity Low_complexity 1 35 0 260 342 83 33 chr17 55561589 55561810 -29876670 - MIR SINE MIR 0 262 19 1923 223 55 32 chr17 55562009 55562569 -29875911 + MER90 LTR ERV1 1 573 -2 768 206 7 7 chr17 55562651 55562797 -29875683 - MER58B DNA MER1_type -1 340 195 296 167 0 0 chr17 55563263 55563311 -29875169 - Tigger1 DNA MER2_type -2370 48 1 2047 279 97 66 chr17 55563314 55564548 -29873932 - MER110-int LTR ERV1 -376 4271 2999 1717 249 3 5 chr17 55564553 55564930 -29873550 - MER82 DNA MER2_type -1 652 277 1757 238 13 47 chr17 55564930 55565464 -29873016 + MER65B LTR ERV1 1 516 -15 1226 198 50 4 chr17 55565483 55565741 -29872739 - MER82 DNA MER2_type -383 270 1 194 170 43 0 chr17 55566472 55566566 -29871914 + (TA)n Simple_repeat Simple_repeat 2 99 0 1814 115 9 96 chr17 55567621 55567943 -29870537 + AluSx SINE Alu 5 298 -14 2197 118 0 7 chr17 55568343 55568649 -29869831 - AluSx SINE Alu -8 304 1 25 83 0 0 chr17 55568724 55568784 -29869696 + AT_rich Low_complexity Low_complexity 1 60 0 6252 91 21 11 chr17 55568994 55569586 -29868894 - L1PA11 LINE L1 -1 6173 5589 1786 155 4 7 chr17 55569586 55569863 -29868617 - AluSx SINE Alu -36 276 1 6252 91 21 11 chr17 55569863 55570540 -29867940 - L1PA11 LINE L1 -585 5589 4926 521 183 0 19 chr17 55570777 55570906 -29867574 - L1P LINE L1 -1094 5052 4926 33 0 0 0 chr17 55571390 55571423 -29867057 + AT_rich Low_complexity Low_complexity 1 33 0 1982 179 38 30 chr17 55571932 55572478 -29866002 - MLT2A2 LTR ERVL 0 554 1 777 306 71 6 chr17 55572497 55572821 -29865659 + MLT1G1 LTR MaLR 241 585 -10 10550 188 88 11 chr17 55572877 55574889 -29863591 + L1MA2 LINE L1 17 2183 -5382 * 12414 160 27 74 chr17 55574858 55577449 -29861031 + L1MA2 LINE L1 3421 5697 -2026 2439 67 0 3 chr17 55577449 55577749 -29860731 + AluY SINE Alu 1 299 -12 12414 160 27 74 chr17 55577749 55579685 -29858795 + L1MA2 LINE L1 5697 7723 0 3051 230 34 21 chr17 55579693 55580584 -29857896 + L1M4 LINE L1 4109 5010 -1136 1230 189 20 138 chr17 55580598 55581049 -29857431 + L1MB3 LINE L1 4855 5252 -894 * 2945 224 81 54 chr17 55581048 55581779 -29856701 + L1P3 LINE L1 385 1290 -5171 189 74 0 0 chr17 55581779 55581806 -29856674 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2945 224 81 54 chr17 55581806 55582084 -29856396 + L1P3 LINE L1 1290 1559 -4902 3740 103 0 2 chr17 55582089 55582615 -29855865 + L1PA10 LINE L1 5629 6153 -15 3023 163 33 0 chr17 55582627 55583173 -29855307 + L1MB3 LINE L1 5593 6156 -27 618 122 38 38 chr17 55583177 55583308 -29855172 + L1MB2 LINE L1 6039 6169 -2 2339 266 91 69 chr17 55583561 55584818 -29853662 + L1M4 LINE L1 26 1309 -5233 5936 156 20 4 chr17 55584848 55586217 -29852263 - L1MA5 LINE L1 -2 7319 5927 6464 211 29 22 chr17 55586232 55587054 -29851426 - L1MA5 LINE L1 -2278 4889 4075 2252 117 0 0 chr17 55587054 55587354 -29851126 - AluSg SINE Alu -10 300 1 6464 211 29 22 chr17 55587354 55588354 -29850126 - L1MA5 LINE L1 -3092 4075 3084 338 22 43 0 chr17 55588354 55588400 -29850080 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 6464 211 29 22 chr17 55588400 55589464 -29849016 - L1MA5 LINE L1 -4083 3084 1980 3216 164 3 31 chr17 55589611 55590214 -29848266 - LTR60 LTR ERV1 0 586 1 7076 161 17 212 chr17 55590214 55592654 -29845826 - L1MA5 LINE L1 -5192 1976 13 2994 217 74 86 chr17 55592655 55593356 -29845124 + L1M4 LINE L1 1301 2009 -4635 1842 23 0 9 chr17 55593356 55593575 -29844905 + L1PA3 LINE L1 5938 6154 -1 2994 217 74 86 chr17 55593575 55594803 -29843677 + L1M4 LINE L1 2009 3214 -3430 24 53 0 0 chr17 55595174 55595212 -29843268 + AT_rich Low_complexity Low_complexity 1 38 0 226 313 0 0 chr17 55595514 55595597 -29842883 + (TATATG)n Simple_repeat Simple_repeat 1 83 0 22 0 0 0 chr17 55595754 55595776 -29842704 + AT_rich Low_complexity Low_complexity 1 22 0 239 325 63 25 chr17 55596349 55596778 -29841702 + L2 LINE L2 2170 2755 -559 400 156 22 44 chr17 55596780 55596870 -29841610 + L1MA9 LINE L1 5526 5613 -721 23 33 0 0 chr17 55596870 55596900 -29841580 + AT_rich Low_complexity Low_complexity 1 30 0 2617 158 41 18 chr17 55596900 55597451 -29841029 + L1MA9 LINE L1 5594 6257 -55 22 0 0 0 chr17 55597489 55597511 -29840969 + AT_rich Low_complexity Low_complexity 1 22 0 193 411 21 7 chr17 55597578 55597719 -29840761 + L2 LINE L2 2813 2955 -317 679 294 12 75 chr17 55599165 55599417 -29839063 - L2 LINE L2 -1019 2295 2060 2794 265 88 58 chr17 55599424 55600623 -29837857 - L2 LINE L2 -1755 1559 326 22 35 0 0 chr17 55600819 55600848 -29837632 + AT_rich Low_complexity Low_complexity 1 29 0 809 168 0 0 chr17 55600904 55601029 -29837451 + FLAM_C SINE Alu 1 125 -18 2044 112 11 14 chr17 55601118 55601446 -29837034 + AluSq SINE Alu 3 329 0 21 0 0 0 chr17 55601485 55601506 -29836974 + AT_rich Low_complexity Low_complexity 1 21 0 2242 96 13 0 chr17 55601757 55602059 -29836421 + AluY SINE Alu 1 306 -5 1355 221 152 0 chr17 55602129 55602464 -29836016 + MLT1D LTR MaLR 120 505 0 587 289 72 61 chr17 55602464 55602810 -29835670 - L2 LINE L2 -430 2884 2535 225 225 200 0 chr17 55602810 55602890 -29835590 + LTR33 LTR ERVL 1 96 -425 519 235 126 30 chr17 55602983 55603213 -29835267 + LTR33 LTR ERVL 258 509 -12 264 133 67 0 chr17 55603235 55603295 -29835185 - L2 LINE L2 -787 2527 2464 220 322 0 35 chr17 55604002 55604117 -29834363 + MIR SINE MIR 106 216 -46 612 181 78 60 chr17 55604173 55604339 -29834141 - MLT1B LTR MaLR -217 173 5 2289 108 31 19 chr17 55606179 55606539 -29831941 - THE1B LTR MaLR 0 364 1 11523 96 10 12 chr17 55606541 55607750 -29830730 - THE1B-int LTR MaLR -5 1575 368 2195 121 0 0 chr17 55607750 55608047 -29830433 + AluSg SINE Alu 1 297 -13 11523 96 10 12 chr17 55608047 55608415 -29830065 - THE1B-int LTR MaLR -1212 368 1 2271 128 19 25 chr17 55608415 55608781 -29829699 - THE1B LTR MaLR 0 364 1 189 296 96 24 chr17 55609738 55609863 -29828617 - L2 LINE L2 -37 3276 3143 1955 142 7 0 chr17 55610426 55610722 -29827758 + AluJo SINE Alu 1 298 -14 209 330 68 11 chr17 55610811 55610899 -29827581 - MER5B DNA MER1_type -60 118 26 248 93 47 0 chr17 55611560 55611603 -29826877 + CT-rich Low_complexity Low_complexity 2 46 0 236 308 26 0 chr17 55612762 55612840 -29825640 + MIR3 SINE MIR 114 193 -15 519 170 0 0 chr17 55612986 55613086 -29825394 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 288 53 0 0 chr17 55613085 55613123 -29825357 + (GA)n Simple_repeat Simple_repeat 2 39 0 * 348 272 96 25 chr17 55613798 55613956 -29824524 - L1ME3A LINE L1 0 6170 6000 19526 171 41 7 chr17 55614020 55617584 -29820896 + L1MA2 LINE L1 14 3705 -3860 826 218 66 5 chr17 55617665 55617862 -29820618 + L1PA12 LINE L1 4 212 -7369 15886 201 18 36 chr17 55617863 55622014 -29816466 + L1PA12 LINE L1 2476 6563 -1021 8483 172 13 12 chr17 55622007 55624830 -29813650 + L1MA2 LINE L1 4749 7723 0 * 31553 84 5 6 chr17 55624841 55630021 -29808459 - L1PA6 LINE L1 -11 6143 958 17399 81 8 7 chr17 55630021 55632322 -29806158 - HERVL-A1 LTR ERVL -3351 2303 1 396 99 0 42 chr17 55632322 55632393 -29806087 - MLT2A1 LTR ERVL 0 444 377 315 183 0 25 chr17 55632393 55632513 -29805967 + (TA)n Simple_repeat Simple_repeat 1 117 0 265 56 0 0 chr17 55632513 55632549 -29805931 - MLT2A1 LTR ERVL -13 431 396 217 184 13 13 chr17 55632567 55632643 -29805837 + (TA)n Simple_repeat Simple_repeat 2 77 0 241 130 0 0 chr17 55632651 55632697 -29805783 + L1MC4 LINE L1 6658 6703 -1339 319 289 0 0 chr17 55632698 55632781 -29805699 - L1MC4 LINE L1 -1342 6700 6618 3040 78 18 0 chr17 55632781 55633178 -29805302 - MLT2A1 LTR ERVL -40 404 1 2340 253 72 15 chr17 55633193 55633999 -29804481 + L1M4 LINE L1 3503 4354 -1792 1324 171 121 0 chr17 55634045 55634326 -29804154 + L1MC1 LINE L1 6014 6328 -5 711 206 98 29 chr17 55634379 55634656 -29803824 + L1M4 LINE L1 4428 4723 -1423 3807 175 64 22 chr17 55635038 55635331 -29803149 + L1MC3 LINE L1 6873 7152 -633 2136 138 33 28 chr17 55635331 55635693 -29802787 + THE1B LTR MaLR 1 364 0 3807 175 64 22 chr17 55635693 55636261 -29802219 + L1MC3 LINE L1 7152 7770 -15 2352 57 10 23 chr17 55636855 55637155 -29801325 + AluY SINE Alu 1 296 -15 243 281 0 0 chr17 55638608 55638665 -29799815 + MER5A DNA MER1_type 26 82 -107 1984 268 39 4 chr17 55638699 55639401 -29799079 - L1MDa LINE L1 -3245 3696 2971 333 207 0 0 chr17 55639389 55639471 -29799009 - L1MDa LINE L1 -5147 1794 1713 * 1019 243 9 5 chr17 55639473 55639691 -29798789 + MLT1F1 LTR MaLR 349 567 0 21 0 0 0 chr17 55639919 55639940 -29798540 + AT_rich Low_complexity Low_complexity 1 21 0 288 240 27 0 chr17 55641473 55641548 -29796932 - L1MDa LINE L1 -5083 1340 1264 1779 179 0 10 chr17 55642410 55642712 -29795768 + AluJo SINE Alu 2 300 -12 279 180 40 0 chr17 55642974 55643024 -29795456 + L2 LINE L2 3221 3272 0 1432 199 136 143 chr17 55643650 55644588 -29793892 + LTR1B LTR ERV1 8 1016 -4 648 309 192 32 chr17 55645759 55646102 -29792378 - L2 LINE L2 -1256 2058 1771 1494 218 151 60 chr17 55646102 55646598 -29791882 - MLT1F LTR MaLR 0 542 2 648 309 192 32 chr17 55646598 55646947 -29791533 - L2 LINE L2 -1543 1771 1255 477 353 92 27 chr17 55646950 55647242 -29791238 - L2 LINE L2 -2803 511 201 224 267 0 0 chr17 55647907 55647952 -29790528 + polypyrimidine Low_complexity Low_complexity 2 46 0 823 179 8 90 chr17 55648200 55648468 -29790012 + L1MC4 LINE L1 6457 6702 -1340 436 222 114 45 chr17 55648472 55648530 -29789950 + L1MC4a LINE L1 6594 6647 -1161 381 43 0 0 chr17 55648530 55648577 -29789903 + (TAGG)n Simple_repeat Simple_repeat 1 47 0 436 222 114 45 chr17 55648577 55648694 -29789786 + L1MC4a LINE L1 6647 6717 -1091 1403 200 25 11 chr17 55648839 55649119 -29789361 + L1M3e LINE L1 5 288 -6742 2909 256 48 30 chr17 55649121 55652029 -29786451 + L1M3e LINE L1 1299 3954 -3152 2266 161 8 3 chr17 55652027 55652394 -29786086 - L1PA16 LINE L1 -54 6112 5744 * 491 88 0 25 chr17 55652394 55652466 -29786014 + L1PA16 LINE L1 6087 6164 -2 3930 184 41 4 chr17 55652504 55653194 -29785286 + MER52A LTR ERV1 1027 1741 -14 306 0 0 0 chr17 55653432 55653466 -29785014 + (CA)n Simple_repeat Simple_repeat 2 35 0 1986 150 3 0 chr17 55653509 55653802 -29784678 - AluJb SINE Alu -18 294 1 279 0 0 0 chr17 55653868 55653906 -29784574 + L1PA3 LINE L1 6115 6152 -3 1399 238 3 45 chr17 55653952 55654305 -29784175 + L1MDb LINE L1 67 404 -6005 3655 215 14 16 chr17 55654330 55655162 -29783318 + L1MDb LINE L1 629 1350 -4954 374 264 102 84 chr17 55655233 55655400 -29783080 + MIR3 SINE MIR 16 185 -23 234 254 0 0 chr17 55657216 55657283 -29781197 + (CATA)n Simple_repeat Simple_repeat 2 68 0 295 295 71 57 chr17 55657561 55657842 -29780638 - L1MC/D LINE L1 -2229 5579 5295 355 386 13 0 chr17 55658079 55658232 -29780248 + Tigger8 DNA MER2_type 71 225 -441 382 312 50 32 chr17 55658332 55658714 -29779766 - MLT1J2 LTR MaLR -13 437 7 523 277 39 29 chr17 55659029 55659235 -29779245 - MIR SINE MIR -21 241 34 298 298 0 12 chr17 55659235 55659304 -29779176 - LTR52 LTR ERVL -146 275 208 693 194 115 107 chr17 55659304 55659556 -29778924 - MLT1C LTR MaLR -3 464 134 2086 79 0 15 chr17 55659556 55659822 -29778658 + AluY SINE Alu 35 296 -15 368 280 16 76 chr17 55659840 55660089 -29778391 - L1MC/D LINE L1 -1434 4712 4484 1960 244 55 25 chr17 55660089 55660614 -29777866 + MLT1F LTR MaLR 2 542 0 368 280 16 76 chr17 55660614 55660678 -29777802 - L1MC/D LINE L1 -1662 4484 4418 33 0 0 0 chr17 55660746 55660779 -29777701 + AT_rich Low_complexity Low_complexity 1 33 0 875 64 96 0 chr17 55660899 55661024 -29777456 + MER85 DNA T2_type 1 137 -2 659 248 35 112 chr17 55661462 55661865 -29776615 - LTR41 LTR ERVL -2 771 400 451 296 11 17 chr17 55661900 55662079 -29776401 - LTR41 LTR ERVL -595 178 1 610 286 79 43 chr17 55663456 55663760 -29774720 + MLT1J2 LTR MaLR 77 391 -59 1713 204 25 11 chr17 55664687 55665045 -29773435 - MLT1A1 LTR MaLR 0 365 3 650 224 53 35 chr17 55665517 55665687 -29772793 - MER5B DNA MER1_type 0 178 6 1803 206 101 46 chr17 55665922 55666397 -29772083 - MLT1D LTR MaLR 0 505 5 1201 63 19 0 chr17 55666452 55666610 -29771870 - L1PA4 LINE L1 -3 6152 5992 2173 145 12 3 chr17 55666701 55667046 -29771434 + MER7A DNA MER2_type 1 346 0 959 187 0 0 chr17 55667336 55667502 -29770978 - AluSg/x SINE Alu -17 293 128 248 28 56 0 chr17 55667507 55667543 -29770937 + (TTTC)n Simple_repeat Simple_repeat 1 38 0 901 100 0 50 chr17 55667545 55667685 -29770795 - AluJb SINE Alu -179 133 1 722 322 84 47 chr17 55668203 55668936 -29769544 - L2 LINE L2 0 3313 2560 1145 301 78 67 chr17 55668936 55669731 -29768749 - L2 LINE L2 -975 2339 1536 1236 150 5 18 chr17 55670617 55670837 -29767643 + L1MA2 LINE L1 15 231 -7334 * 17070 135 43 16 chr17 55670835 55673849 -29764631 + L1MA2 LINE L1 788 3889 -3676 2266 217 11 11 chr17 55673949 55674520 -29763960 + L1MA2 LINE L1 4128 4698 -2867 * 38393 88 5 7 chr17 55674502 55680659 -29757821 + L1PA6 LINE L1 8 6154 0 10334 160 17 7 chr17 55680658 55680897 -29757583 + L1MA2 LINE L1 4671 4906 -2817 * 1691 30 0 0 chr17 55680897 55681098 -29757382 + L1PA4 LINE L1 5951 6152 -3 10334 160 17 7 chr17 55681098 55682378 -29756102 + L1MA2 LINE L1 4906 6171 -1552 2014 153 0 6 chr17 55682378 55682692 -29755788 + AluSx SINE Alu 1 312 0 10334 160 17 7 chr17 55682692 55684192 -29754288 + L1MA2 LINE L1 6171 7723 0 217 307 18 70 chr17 55684324 55684438 -29754042 + MIR SINE MIR 16 123 -85 403 299 22 15 chr17 55684791 55684928 -29753552 - MIR SINE MIR -3 259 122 6338 103 12 30 chr17 55685885 55686877 -29751603 - L1MA2 LINE L1 0 6304 5331 210 247 215 0 chr17 55686877 55686939 -29751541 + MIR SINE MIR 41 122 -140 256 352 33 66 chr17 55686939 55687121 -29751359 - MER5A DNA MER1_type -1 188 13 1187 232 57 52 chr17 55687260 55687648 -29750832 - MLT1B LTR MaLR 0 390 1 2153 274 59 36 chr17 55688711 55689644 -29748836 - L1MC4 LINE L1 -273 7769 6816 730 237 35 6 chr17 55690072 55690245 -29748235 - MER58A DNA MER1_type 0 224 47 309 305 62 49 chr17 55690980 55691288 -29747192 - L1M4 LINE L1 -1483 4663 4352 1069 160 19 29 chr17 55691767 55691973 -29746507 - L1MA7 LINE L1 -232 6059 5856 555 142 58 4 chr17 55692150 55692262 -29746218 + MIR SINE MIR 35 146 -62 22 35 0 0 chr17 55692308 55692337 -29746143 + AT_rich Low_complexity Low_complexity 1 29 0 410 205 33 73 chr17 55692490 55692641 -29745839 - MER104 DNA Tc2 -35 145 1 226 342 8 60 chr17 55692666 55692783 -29745697 - MIR SINE MIR -34 228 118 25652 145 11 11 chr17 55692871 55699244 -29739236 - L1PA8A LINE L1 -4 6442 6 270 367 33 0 chr17 55699305 55699395 -29739085 - L2 LINE L2 -40 3273 3181 1866 154 42 3 chr17 55701573 55701905 -29736575 - Tigger7 DNA MER2_type 0 2487 2143 785 159 4 20 chr17 55701900 55702131 -29736349 + Tigger7 DNA MER2_type 72 347 -2140 * 296 325 0 0 chr17 55702128 55702208 -29736272 - Tigger7 DNA MER2_type -653 80 1 * 276 244 16 7 chr17 55702666 55702775 -29735705 + MER117 DNA MER1_type 3 196 -1 228 263 40 53 chr17 55703170 55703246 -29735234 + MIR3 SINE MIR 1 75 -133 694 266 104 92 chr17 55703300 55703733 -29734747 + MLT1H LTR MaLR 112 549 0 434 274 26 0 chr17 55703968 55704085 -29734395 + MIR SINE MIR 129 248 -14 916 321 46 17 chr17 55704568 55704917 -29733563 - LTR16B LTR ERVL -6 458 100 648 353 12 6 chr17 55705827 55705994 -29732486 + MER91A DNA MER1_type 2 169 -27 2198 103 0 0 chr17 55705997 55706310 -29732170 + AluSg SINE Alu 2 314 0 687 259 108 13 chr17 55707142 55707374 -29731106 - L2 LINE L2 -509 2805 2552 23 33 0 0 chr17 55708033 55708063 -29730417 + AT_rich Low_complexity Low_complexity 1 30 0 1004 259 50 32 chr17 55708103 55708539 -29729941 + MER114 LTR ERV 1 444 -204 500 178 33 0 chr17 55708623 55708695 -29729785 - MER5A DNA MER1_type -87 102 25 5846 73 13 14 chr17 55708695 55709476 -29729004 - LTR17 LTR ERV1 0 780 1 500 178 33 0 chr17 55709476 55709493 -29728987 - MER5A DNA MER1_type -164 25 10 35 41 0 0 chr17 55710115 55710164 -29728316 + AT_rich Low_complexity Low_complexity 1 49 0 1607 120 47 125 chr17 55710614 55711021 -29727459 - THE1C LTR MaLR 0 375 1 29 28 0 0 chr17 55711088 55711124 -29727356 + AT_rich Low_complexity Low_complexity 1 36 0 563 223 96 30 chr17 55711965 55712131 -29726349 + MER102a DNA MER1_type 20 196 -134 250 319 64 0 chr17 55712303 55712397 -29726083 + MER102a DNA MER1_type 221 320 -10 549 152 0 30 chr17 55712605 55712704 -29725776 - AluSg1 SINE Alu -212 97 2 1655 181 0 23 chr17 55713260 55713563 -29724917 - AluJo SINE Alu -16 296 1 237 235 0 0 chr17 55713567 55713618 -29724862 + MER117 DNA MER1_type 53 103 -94 2306 102 0 0 chr17 55714260 55714564 -29723916 + AluSx SINE Alu 1 304 -8 753 210 84 6 chr17 55714774 55714941 -29723539 + MLT1D LTR MaLR 326 505 0 316 258 17 25 chr17 55716231 55716351 -29722129 + MER113 DNA MER1_type? 1 119 -402 2337 75 3 3 chr17 55717565 55717871 -29720609 + AluY SINE Alu 1 306 -5 216 306 51 20 chr17 55718931 55719029 -29719451 - MIR SINE MIR -70 192 92 675 221 70 89 chr17 55719087 55719300 -29719180 + MER58A DNA MER1_type 1 209 -15 416 248 0 30 chr17 55719309 55719410 -29719070 - L2 LINE L2 -41 3272 3175 431 248 171 0 chr17 55719438 55719567 -29718913 - MLT1D LTR MaLR -68 437 287 525 206 85 22 chr17 55719595 55719756 -29718724 - MLT1D LTR MaLR -310 195 27 221 73 0 24 chr17 55719795 55719836 -29718644 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1679 176 0 14 chr17 55719836 55720120 -29718360 - AluJo SINE Alu -32 280 1 387 250 57 0 chr17 55720122 55720210 -29718270 - L2 LINE L2 -955 2359 2267 390 279 191 7 chr17 55721623 55721770 -29716710 + MIR SINE MIR 66 239 -23 240 35 0 0 chr17 55722586 55722615 -29715865 + (TG)n Simple_repeat Simple_repeat 2 30 0 2361 291 87 11 chr17 55722816 55723659 -29714821 - L2 LINE L2 -654 2660 1754 7340 35 9 0 chr17 55726560 55727894 -29710586 + L1PA4 LINE L1 4809 6155 0 35 0 0 0 chr17 55727894 55727929 -29710551 + AT_rich Low_complexity Low_complexity 1 35 0 706 269 53 108 chr17 55728197 55728613 -29709867 + MLT1J1 LTR MaLR 54 446 0 568 255 19 19 chr17 55728617 55728778 -29709702 - MIR SINE MIR -38 224 64 241 250 36 0 chr17 55730807 55730863 -29707617 - L2 LINE L2 0 3313 3256 9632 35 0 2 chr17 55731138 55733079 -29705401 - L1PA3 LINE L1 0 6155 4218 7601 31 0 0 chr17 55733079 55733989 -29704491 + L1PA3 LINE L1 3310 4219 -1927 2117 106 0 0 chr17 55735130 55735436 -29703044 - AluSg SINE Alu 0 306 1 189 0 0 0 chr17 55735698 55735719 -29702761 + (T)n Simple_repeat Simple_repeat 1 21 0 927 188 127 60 chr17 55735732 55736060 -29702420 + MLT1A1 LTR MaLR 1 396 0 3784 204 30 9 chr17 55736728 55738100 -29700380 + L1MB8 LINE L1 4382 5784 -400 1420 187 137 8 chr17 55739065 55739423 -29699057 + L1MB8 LINE L1 5773 6176 -2 578 294 69 20 chr17 55740240 55740631 -29697849 + L1ME2 LINE L1 3543 3952 -2194 435 307 79 73 chr17 55740780 55741275 -29697205 + L1ME2 LINE L1 4162 4659 -1487 537 267 62 110 chr17 55741338 55741728 -29696752 + MLT1I LTR MaLR 36 406 -3 4361 163 8 35 chr17 55741752 55742621 -29695859 - L1P LINE L1 -1014 5132 4287 2910 76 17 2 chr17 55742622 55743029 -29695451 + L1PA13 LINE L1 5751 6163 0 313 311 95 23 chr17 55743165 55743429 -29695051 + L1ME2 LINE L1 5436 5718 -452 711 300 36 44 chr17 55743619 55743734 -29694746 + L1ME2 LINE L1 5759 5873 -291 2423 68 3 0 chr17 55743734 55744042 -29694438 + AluY SINE Alu 1 309 -2 711 300 36 44 chr17 55744042 55744286 -29694194 + L1ME2 LINE L1 5873 6115 -49 185 145 53 0 chr17 55744522 55744598 -29693882 + (TA)n Simple_repeat Simple_repeat 1 80 0 305 250 67 29 chr17 55744617 55744721 -29693759 - L1ME LINE L1 -452 5718 5611 271 259 78 34 chr17 55744966 55745171 -29693309 + L1ME4a LINE L1 5872 6085 -36 327 274 128 17 chr17 55745244 55745361 -29693119 - L2 LINE L2 -6 3266 3137 7232 51 0 2 chr17 55745703 55747232 -29691248 + L1PA7 LINE L1 4620 6153 -1 806 212 49 30 chr17 55747340 55747543 -29690937 - MLT1D LTR MaLR 0 505 299 630 273 0 12 chr17 55747661 55747826 -29690654 - AluJo/FRAM SINE Alu -3 299 137 576 132 215 0 chr17 55747829 55747950 -29690530 - AluSp/q SINE Alu -12 301 155 644 152 0 0 chr17 55747950 55748049 -29690431 - LTR12 LTR ERV1 -135 579 481 240 247 14 0 chr17 55748050 55748123 -29690357 - LTR30 LTR ERV1 -79 643 570 1350 132 12 101 chr17 55748125 55748516 -29689964 - LTR12 LTR ERV1 -389 2049 14 333 214 0 36 chr17 55748516 55748608 -29689872 - AluJ/monomer SINE Alu -252 50 2 2176 103 0 0 chr17 55748756 55749074 -29689406 - AluSc SINE Alu 0 318 1 1388 224 57 26 chr17 55749599 55749951 -29688529 + MLT1A1 LTR MaLR 3 365 0 2470 170 21 2 chr17 55749952 55750370 -29688110 - MSTB LTR MaLR 0 426 1 1596 158 42 7 chr17 55750461 55750783 -29687697 - AluSx SINE Alu 0 312 1 27 81 0 0 chr17 55751179 55751241 -29687239 + AT_rich Low_complexity Low_complexity 1 62 0 1655 181 10 14 chr17 55752478 55752766 -29685714 - AluJo SINE Alu -25 287 1 1334 197 171 14 chr17 55752805 55753156 -29685324 - L1MB7 LINE L1 -16 6168 5763 9754 123 20 25 chr17 55754071 55756392 -29682088 + L1PA10 LINE L1 3832 6157 -11 23 0 0 0 chr17 55756690 55756713 -29681767 + AT_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr17 55756885 55756919 -29681561 + (TC)n Simple_repeat Simple_repeat 1 34 0 252 59 0 0 chr17 55756950 55756984 -29681496 + (CA)n Simple_repeat Simple_repeat 1 34 0 225 277 0 24 chr17 55757386 55757469 -29681011 + L1MC4 LINE L1 6625 6705 -1337 28 48 0 0 chr17 55757636 55757678 -29680802 + AT_rich Low_complexity Low_complexity 1 42 0 225 182 0 18 chr17 55757800 55757855 -29680625 + L1MD3 LINE L1 7929 7982 -13 333 257 71 0 chr17 55757858 55757971 -29680509 - MER113 DNA MER1_type? -400 121 1 2008 136 7 0 chr17 55758036 55758331 -29680149 + AluSx SINE Alu 1 297 -15 481 229 168 46 chr17 55758543 55758805 -29679675 - LTR50 LTR ERVL 0 795 502 556 249 11 63 chr17 55759009 55759198 -29679282 - LTR41 LTR ERVL -585 188 10 29 28 0 0 chr17 55759419 55759455 -29679025 + AT_rich Low_complexity Low_complexity 1 36 0 402 296 59 50 chr17 55759497 55760206 -29678274 + L1ME4a LINE L1 5221 5941 -180 31 44 0 0 chr17 55760369 55760414 -29678066 + AT_rich Low_complexity Low_complexity 1 45 0 1317 183 19 4 chr17 55761027 55761289 -29677191 + L1MA6 LINE L1 4995 5260 -886 4343 153 14 27 chr17 55761291 55762116 -29676364 + L1MA6 LINE L1 5486 6300 0 284 301 135 26 chr17 55762254 55762410 -29676070 - MIR SINE MIR -70 192 20 2763 212 17 36 chr17 55762578 55762687 -29675793 - L1M2 LINE L1 -4125 2724 2614 1559 186 48 3 chr17 55762687 55762982 -29675498 - AluSx SINE Alu -2 310 3 2763 212 17 36 chr17 55762982 55763536 -29674944 - L1M2 LINE L1 -4235 2614 2074 16394 199 20 28 chr17 55763536 55768396 -29670084 + L1PA15 LINE L1 1264 6043 -773 2211 106 0 7 chr17 55768396 55768698 -29669782 + AluY SINE Alu 1 300 -11 16394 199 20 28 chr17 55768698 55769446 -29669034 + L1PA15 LINE L1 6043 6795 -21 194 33 67 0 chr17 55769449 55769479 -29669001 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 246 196 18 18 chr17 55769493 55769549 -29668931 + MIR SINE MIR 50 105 -157 2469 189 39 65 chr17 55770113 55770725 -29667755 + LTR9 LTR ERV1 1 596 -16 222 274 27 0 chr17 55770966 55771039 -29667441 + GA-rich Low_complexity Low_complexity 4 78 0 238 270 0 0 chr17 55771888 55771962 -29666518 + (TTTA)n Simple_repeat Simple_repeat 3 76 0 405 277 9 18 chr17 55773338 55773450 -29665030 - MER45 DNA AcHobo -60 118 8 283 320 0 24 chr17 55777733 55777858 -29660622 - LTR67 LTR ERVL -5 552 431 956 289 78 58 chr17 55779146 55779609 -29658871 - L2 LINE L2 -1 3312 2836 2369 103 0 0 chr17 55779609 55779910 -29658570 + AluY SINE Alu 1 301 -10 956 289 78 58 chr17 55779910 55780086 -29658394 - L2 LINE L2 -477 2836 2665 339 376 52 6 chr17 55780126 55780299 -29658181 - L3 LINE CR1 -427 1150 970 1378 264 46 14 chr17 55780319 55780936 -29657544 + L1ME1 LINE L1 52 732 -5664 1307 252 75 15 chr17 55780940 55781088 -29657392 + L1ME1 LINE L1 2965 3103 -3112 3108 142 8 6 chr17 55781088 55781594 -29656886 - MER9 LTR ERVK -4 507 1 1307 252 75 15 chr17 55781594 55782089 -29656391 + L1ME1 LINE L1 3103 3650 -2565 1500 202 8 0 chr17 55782089 55782346 -29656134 - AluJo SINE Alu -20 292 34 6300 145 12 2 chr17 55782364 55784171 -29654309 - L1MA3 LINE L1 0 7724 5721 1207 119 0 0 chr17 55784174 55784367 -29654113 - L1MA3 LINE L1 -5076 2489 2297 7142 169 9 15 chr17 55784368 55785645 -29652835 - L1MA3 LINE L1 -6280 1285 16 503 226 49 0 chr17 55785691 55785855 -29652625 + L1ME1 LINE L1 5141 5312 -903 239 116 47 0 chr17 55785858 55785901 -29652579 + MLT1A1 LTR MaLR 1 45 -383 659 178 158 20 chr17 55785903 55786049 -29652431 - FAM SINE Alu -9 166 1 713 213 66 6 chr17 55786124 55786307 -29652173 + MLT1A1 LTR MaLR 172 365 0 1795 225 132 13 chr17 55786319 55786954 -29651526 + L1ME1 LINE L1 5323 6033 -202 23 0 0 0 chr17 55787053 55787076 -29651404 + AT_rich Low_complexity Low_complexity 1 23 0 596 285 82 12 chr17 55787109 55787449 -29651031 - L1MDa LINE L1 -3575 2965 2602 350 232 42 84 chr17 55787457 55787599 -29650881 - L1MDa LINE L1 -3963 2577 2442 1769 159 62 7 chr17 55787678 55787968 -29650512 + AluJb SINE Alu 1 306 -6 22 35 0 0 chr17 55789235 55789264 -29649216 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 55789743 55789767 -29648713 + AT_rich Low_complexity Low_complexity 1 24 0 279 0 0 0 chr17 55790210 55790241 -29648239 + (ATG)n Simple_repeat Simple_repeat 1 31 0 1965 109 11 7 chr17 55790241 55790563 -29647917 - AluSx SINE Alu 0 323 1 245 289 184 7 chr17 55790749 55790901 -29647579 - MIR SINE MIR -68 194 16 343 323 118 20 chr17 55791930 55792147 -29646333 + MIR SINE MIR 15 251 -11 1959 138 0 52 chr17 55792374 55792701 -29645779 + AluSq SINE Alu 1 310 -3 342 282 47 59 chr17 55792915 55793085 -29645395 + L1ME3 LINE L1 5718 5885 -277 1188 234 17 0 chr17 55793102 55793337 -29645143 + MER8 DNA MER2_type 1 239 0 22 70 0 0 chr17 55793596 55793639 -29644841 + AT_rich Low_complexity Low_complexity 1 43 0 219 298 76 46 chr17 55794078 55794209 -29644271 - MIR SINE MIR -25 237 103 2327 68 38 3 chr17 55794654 55794946 -29643534 - AluY SINE Alu -9 302 1 5473 158 27 8 chr17 55797195 55797500 -29640980 + L1PB2 LINE L1 4399 4697 -1454 186 43 0 0 chr17 55797500 55797523 -29640957 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 5473 158 27 8 chr17 55797523 55798935 -29639545 + L1PB2 LINE L1 4697 6149 -2 4608 146 14 8 chr17 55798944 55799769 -29638711 + L1PB4 LINE L1 5315 6144 -12 361 232 98 89 chr17 55800384 55800630 -29637850 + L2 LINE L2 3058 3305 -8 291 350 37 37 chr17 55800746 55800909 -29637571 - MIR SINE MIR -89 173 11 892 178 27 93 chr17 55801058 55801283 -29637197 + MER20 DNA MER1_type 9 218 -1 6622 71 39 0 chr17 55801824 55803242 -29635238 - L1PA8 LINE L1 0 6172 4716 537 261 74 11 chr17 55803377 55803555 -29634925 - MIR SINE MIR -65 143 6 676 327 34 5 chr17 55803720 55803925 -29634555 + MIR SINE MIR 31 241 -21 180 0 0 0 chr17 55804118 55804138 -29634342 + (CAA)n Simple_repeat Simple_repeat 2 21 0 231 333 0 14 chr17 55804239 55804311 -29634169 - L2 LINE L2 -2 3270 3200 194 328 16 0 chr17 55804508 55804569 -29633911 - L2 LINE L2 -213 3059 2998 636 315 84 8 chr17 55804592 55804830 -29633650 + MIR SINE MIR 3 258 -4 253 385 100 43 chr17 55804870 55805241 -29633239 - L2 LINE L2 -363 2951 2560 341 307 18 0 chr17 55806257 55806371 -29632109 + 7SK RNA RNA 2 117 -76 187 289 39 0 chr17 55806661 55806713 -29631767 - MIR SINE MIR -105 103 50 836 249 27 23 chr17 55807893 55808114 -29630366 - MER58A DNA MER1_type 0 224 3 22 56 0 0 chr17 55809129 55809165 -29629315 + AT_rich Low_complexity Low_complexity 1 36 0 254 240 189 18 chr17 55809522 55809686 -29628794 + MIR SINE MIR 19 216 -42 1774 161 3 45 chr17 55810252 55810562 -29627918 - AluJo SINE Alu -15 297 1 29 0 0 0 chr17 55810901 55810930 -29627550 + AT_rich Low_complexity Low_complexity 1 29 0 259 333 69 0 chr17 55811580 55811682 -29626798 + MIR SINE MIR 48 156 -106 220 211 42 0 chr17 55811978 55812049 -29626431 + T-rich Low_complexity Low_complexity 2 75 0 2112 149 39 14 chr17 55812207 55812562 -29625918 + THE1B LTR MaLR 1 364 0 598 331 60 19 chr17 55812631 55812948 -29625532 + MLT1K LTR MaLR 144 473 -115 727 115 0 18 chr17 55813161 55813274 -29625206 - AluJb SINE Alu 0 312 202 1769 164 4 11 chr17 55813291 55813571 -29624909 + AluJb SINE Alu 21 298 -14 2394 68 14 0 chr17 55813707 55814002 -29624478 - AluY SINE Alu -12 299 1 22 0 0 0 chr17 55814002 55814024 -29624456 + AT_rich Low_complexity Low_complexity 1 22 0 489 167 29 20 chr17 55814524 55814626 -29623854 + MLT1K LTR MaLR 486 588 0 298 295 18 18 chr17 55816070 55816182 -29622298 - MLT1J1 LTR MaLR -295 151 40 222 237 161 48 chr17 55817200 55817386 -29621094 - L2 LINE L2 -7 3306 3100 708 256 13 64 chr17 55817392 55817626 -29620854 + MIR SINE MIR 41 262 0 21 36 0 0 chr17 55817691 55817719 -29620761 + AT_rich Low_complexity Low_complexity 1 28 0 2233 112 3 0 chr17 55818633 55818938 -29619542 + AluSq SINE Alu 1 306 -7 261 309 54 112 chr17 55820280 55820503 -29617977 + L2 LINE L2 3058 3267 -5 253 314 144 8 chr17 55820849 55820967 -29617513 + MIR SINE MIR 4 137 -125 291 329 54 22 chr17 55821958 55822119 -29616361 - MIR SINE MIR -63 145 30 255 248 230 18 chr17 55822426 55822539 -29615941 + MIR3 SINE MIR 44 180 -28 206 339 17 34 chr17 55823014 55823132 -29615348 - MIR SINE MIR -74 188 73 2283 11 57 0 chr17 55823181 55823446 -29615034 + AluY SINE Alu 21 300 -11 2167 73 7 7 chr17 55823455 55823744 -29614736 + AluY SINE Alu 1 289 -22 294 297 168 0 chr17 55824281 55824382 -29614098 + L2 LINE L2 3137 3254 -18 255 322 33 53 chr17 55825594 55825746 -29612734 + L2 LINE L2 3123 3271 -1 783 239 63 108 chr17 55826751 55827131 -29611349 + MLT1A1 LTR MaLR 3 365 0 206 300 56 33 chr17 55827206 55827296 -29611184 - MER5B DNA MER1_type -79 99 8 308 161 0 0 chr17 55829408 55829470 -29609010 + L1 LINE L1 4255 4316 -1830 539 218 30 0 chr17 55829534 55829635 -29608845 + MER58A DNA MER1_type 1 104 -3 * 1469 232 47 76 chr17 55829633 55830257 -29608223 - LTR19C LTR ERV1 0 766 1 698 230 0 0 chr17 55830257 55830383 -29608097 + MER58A DNA MER1_type 99 224 0 283 190 13 25 chr17 55830670 55830749 -29607731 + L1ME LINE L1 5685 5762 -359 22 0 0 0 chr17 55830965 55830987 -29607493 + AT_rich Low_complexity Low_complexity 1 22 0 324 48 0 0 chr17 55832021 55832063 -29606417 + (CA)n Simple_repeat Simple_repeat 2 43 0 209 256 0 0 chr17 55832191 55832234 -29606246 + L2 LINE L2 3267 3309 -4 352 205 264 18 chr17 55832904 55833069 -29605411 - MIR SINE MIR -60 202 6 23 86 0 0 chr17 55833521 55833579 -29604901 + AT_rich Low_complexity Low_complexity 1 58 0 305 278 26 98 chr17 55833625 55833859 -29604621 - L1MC4 LINE L1 0 8042 7826 534 316 61 26 chr17 55833929 55834239 -29604241 - L1ME LINE L1 -460 5661 5341 6840 72 2 0 chr17 55834779 55836498 -29601982 + L1PA7 LINE L1 4432 6151 -3 740 327 40 54 chr17 55836646 55837093 -29601387 + L1ME LINE L1 12 452 -5618 866 275 91 58 chr17 55837345 55837520 -29600960 + L1ME LINE L1 572 740 -5521 2093 167 0 14 chr17 55837520 55837891 -29600589 - MER47A DNA MER2_type 0 366 1 866 275 91 58 chr17 55837891 55838669 -29599811 + L1ME LINE L1 740 1557 -4704 24 0 0 0 chr17 55838757 55838781 -29599699 + AT_rich Low_complexity Low_complexity 1 24 0 409 330 121 0 chr17 55838863 55839069 -29599411 - MIR SINE MIR -30 232 2 561 325 24 20 chr17 55839076 55839325 -29599155 - MIR SINE MIR -10 252 3 2652 93 0 48 chr17 55840611 55841007 -29597473 + MER51B LTR ERV1 1 377 0 239 226 38 0 chr17 55841353 55841406 -29597074 - MIR3 SINE MIR -5 203 149 235 151 11 140 chr17 55841469 55841562 -29596918 + L1ME LINE L1 2055 2135 -3945 1374 196 50 33 chr17 55841772 55842223 -29596257 + MER31A LTR ERV1 1 485 0 415 314 38 24 chr17 55842229 55842351 -29596129 + L1ME LINE L1 2408 2536 -3544 3938 94 2 14 chr17 55842351 55842912 -29595568 - MER41A LTR ERV1 0 554 1 415 314 38 24 chr17 55842912 55842999 -29595481 + L1ME LINE L1 2536 2620 -3460 812 169 0 58 chr17 55842999 55843058 -29595422 + MLT1A2 LTR MaLR 1 62 -312 3812 110 2 51 chr17 55843058 55843685 -29594795 + MER4A LTR ERV1 1 596 -4 812 169 0 58 chr17 55843685 55843797 -29594683 + MLT1A2 LTR MaLR 62 162 -212 249 163 0 0 chr17 55843805 55843854 -29594626 + CT-rich Low_complexity Low_complexity 2 50 0 786 215 10 80 chr17 55843904 55844104 -29594376 + MLT1A2 LTR MaLR 189 374 0 575 227 130 94 chr17 55844161 55844291 -29594189 + L1ME LINE L1 2680 2804 -3276 2350 90 0 0 chr17 55844291 55844581 -29593899 - AluSc SINE Alu -16 293 4 575 227 130 94 chr17 55844581 55844980 -29593500 + L1ME LINE L1 2804 3253 -2827 1583 164 31 31 chr17 55844980 55845266 -29593214 + AluJo SINE Alu 3 288 -24 575 227 130 94 chr17 55845266 55845584 -29592896 + L1ME LINE L1 3253 3558 -2522 364 303 123 48 chr17 55846412 55846745 -29591735 + L1ME4a LINE L1 5715 6072 -49 275 359 76 0 chr17 55847642 55847787 -29590693 - MIR SINE MIR 0 262 107 240 342 36 18 chr17 55847863 55847974 -29590506 - MIR SINE MIR -130 132 20 198 233 0 0 chr17 55848511 55848571 -29589909 + (CA)n Simple_repeat Simple_repeat 1 60 0 272 356 69 19 chr17 55848897 55849057 -29589423 - L2 LINE L2 0 3272 3105 263 196 18 0 chr17 55849518 55849574 -29588906 + MER96 DNA MER1_type? 1 57 -118 2704 157 15 11 chr17 55849574 55850052 -29588428 - MER31A LTR ERV1 0 485 6 476 232 0 10 chr17 55850057 55850156 -29588324 - MER96 DNA MER1_type? -53 122 25 1012 249 35 39 chr17 55850159 55850565 -29587915 + L1ME1 LINE L1 1722 2125 -4415 562 229 49 8 chr17 55850581 55850826 -29587654 + L1ME1 LINE L1 3535 3789 -2751 3122 70 5 2 chr17 55850830 55851228 -29587252 + MLT2A1 LTR ERVL 1 399 -45 276 133 0 0 chr17 55851229 55851289 -29587191 + (TA)n Simple_repeat Simple_repeat 2 61 0 3105 67 0 0 chr17 55851313 55851703 -29586777 + HERVL-A1 LTR ERVL 1 390 -5264 * 10815 77 8 8 chr17 55851684 55853105 -29585375 + HERVL-A1 LTR ERVL 4233 5654 0 3147 82 0 2 chr17 55853105 55853510 -29584970 + MLT2A1 LTR ERVL 1 404 -40 361 289 0 0 chr17 55853520 55853610 -29584870 - L1MC4 LINE L1 -1339 6703 6614 415 62 0 47 chr17 55853677 55853741 -29584739 + MLT2A1 LTR ERVL 384 444 0 5256 222 54 75 chr17 55853752 55855115 -29583365 + L1ME1 LINE L1 3799 5182 -1514 475 159 0 57 chr17 55855115 55855203 -29583277 + AluJ/FLAM SINE Alu 1 83 -229 5256 222 54 75 chr17 55855203 55855960 -29582520 + L1ME1 LINE L1 5182 5953 -743 37687 89 8 9 chr17 55855969 55862184 -29576296 + L1PA6 LINE L1 11 6219 0 1699 242 82 32 chr17 55862189 55862389 -29576091 + L1ME1 LINE L1 5948 6137 -423 303 28 0 0 chr17 55862389 55862425 -29576055 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1699 242 82 32 chr17 55862425 55862787 -29575693 + L1ME1 LINE L1 6137 6538 -22 235 247 0 68 chr17 55863307 55863380 -29575100 - MIR3 SINE MIR -8 200 133 1253 261 67 42 chr17 55863425 55863874 -29574606 + MER74B LTR ERVL 89 548 -74 423 189 45 38 chr17 55863791 55863920 -29574560 - MER88 LTR ERVL -288 437 79 * 286 278 144 37 chr17 55865123 55865310 -29573170 - MIR SINE MIR -6 256 50 1102 270 36 26 chr17 55865538 55865923 -29572557 + L1ME3A LINE L1 5567 5955 -215 184 347 138 18 chr17 55866554 55866721 -29571759 - L2 LINE L2 -225 3047 2861 201 138 0 0 chr17 55866775 55866804 -29571676 + (TG)n Simple_repeat Simple_repeat 1 29 0 1653 176 6 29 chr17 55866830 55867142 -29571338 + AluJo SINE Alu 1 305 -7 2381 253 33 64 chr17 55867155 55867216 -29571264 + L1ME3 LINE L1 5272 5333 -829 2339 84 3 0 chr17 55867216 55867514 -29570966 + AluSp SINE Alu 1 299 -14 2381 253 33 64 chr17 55867514 55867722 -29570758 + L1ME3 LINE L1 5333 5546 -616 3275 134 18 0 chr17 55867722 55868220 -29570260 - MER84 LTR ERV1 0 507 1 2381 253 33 64 chr17 55868220 55868860 -29569620 + L1ME3 LINE L1 5546 6154 -8 649 306 10 16 chr17 55869180 55869373 -29569107 + MIR SINE MIR 20 211 -51 328 230 27 51 chr17 55869547 55869705 -29568775 + MLT1J LTR MaLR 105 188 -323 324 183 106 58 chr17 55869894 55869998 -29568482 + MLT1L LTR MaLR 507 615 0 233 237 194 11 chr17 55870084 55870177 -29568303 - L2 LINE L2 -9 3263 3154 423 311 133 76 chr17 55870266 55870642 -29567838 + L2 LINE L2 2850 3254 -59 992 251 9 0 chr17 55870642 55870861 -29567619 + MER58A DNA MER1_type 1 221 -3 423 311 133 76 chr17 55870861 55870905 -29567575 + L2 LINE L2 3254 3294 -19 2262 98 0 16 chr17 55921061 55921376 -29517104 + AluSx SINE Alu 1 310 -2 1196 252 94 2 chr17 55921377 55921801 -29516679 - L1MDb LINE L1 -4434 2106 1644 1510 226 50 56 chr17 55921808 55922273 -29516207 - MLT1C LTR MaLR 0 467 6 1866 220 54 32 chr17 55922280 55923020 -29515460 - L1MDb LINE L1 -4902 1638 917 303 354 67 25 chr17 55923531 55923847 -29514633 - L1MDb LINE L1 -6211 329 1 2395 235 198 42 chr17 55924361 55925668 -29512812 + L2 LINE L2 1791 3311 -2 1541 176 20 30 chr17 55925935 55926230 -29512250 - AluJo SINE Alu -19 293 2 2913 140 47 57 chr17 55927720 55928555 -29509925 - MER21A LTR ERV1 0 931 1 404 280 76 13 chr17 55928555 55928711 -29509769 + Charlie8 DNA MER1_type 82 247 -2170 616 282 6 43 chr17 55928972 55929167 -29509313 - MER21A-int LTR ERV1 -233 6443 6242 2024 118 24 7 chr17 55929167 55929464 -29509016 + AluSg SINE Alu 1 302 -8 616 282 6 43 chr17 55929464 55929659 -29508821 - MER21A-int LTR ERV1 -434 6242 4570 252 128 0 0 chr17 55929992 55930031 -29508449 + Alu SINE Alu 1 39 -264 47 33 0 0 chr17 55930216 55930277 -29508203 + AT_rich Low_complexity Low_complexity 1 61 0 45 34 0 0 chr17 55930321 55930380 -29508100 + AT_rich Low_complexity Low_complexity 1 59 0 1659 175 14 14 chr17 55930663 55930960 -29507520 + AluJo SINE Alu 1 297 -15 36 77 0 0 chr17 55930997 55931075 -29507405 + AT_rich Low_complexity Low_complexity 1 78 0 222 62 0 0 chr17 55931117 55931149 -29507331 + (TG)n Simple_repeat Simple_repeat 2 33 0 2354 108 0 7 chr17 55931236 55931543 -29506937 - AluSx SINE Alu -7 305 1 824 191 40 0 chr17 55931866 55932018 -29506462 + FRAM SINE Alu 2 159 -17 491 314 58 83 chr17 55932861 55933224 -29505256 + L2 LINE L2 2245 2598 -716 330 360 26 20 chr17 55933647 55933800 -29504680 + L2 LINE L2 3116 3269 -3 252 212 12 47 chr17 55934058 55934143 -29504337 + (CATATA)n Simple_repeat Simple_repeat 2 83 0 180 300 117 0 chr17 55934493 55934553 -29503927 - L2 LINE L2 -22 3291 3225 236 379 55 38 chr17 55934760 55934995 -29503485 - L2 LINE L2 -210 3062 2824 384 258 179 0 chr17 55935159 55935310 -29503170 - MIR SINE MIR -15 247 70 407 61 61 10 chr17 55936139 55936229 -29502251 + (TA)n Simple_repeat Simple_repeat 2 99 -5 1514 183 70 7 chr17 55936229 55936502 -29501978 - AluJo SINE Alu -22 290 1 407 61 61 10 chr17 55936502 55936509 -29501971 + (TA)n Simple_repeat Simple_repeat 99 104 0 974 119 0 0 chr17 55937318 55937444 -29501036 + FLAM_C SINE Alu 1 126 -17 26 0 0 0 chr17 55937448 55937474 -29501006 + AT_rich Low_complexity Low_complexity 1 26 0 1767 67 0 18 chr17 55940326 55940550 -29497930 - AluY SINE Alu -91 220 1 28 0 0 0 chr17 55940850 55940878 -29497602 + AT_rich Low_complexity Low_complexity 1 28 0 273 283 40 9 chr17 55941312 55941495 -29496985 + MIR SINE MIR 9 252 -10 195 433 43 16 chr17 55941659 55941846 -29496634 - L2 LINE L2 -215 3057 2866 2132 113 0 36 chr17 55942504 55942813 -29495667 + AluSx SINE Alu 1 298 -14 1901 150 4 0 chr17 55943034 55943308 -29495172 + AluJb SINE Alu 1 275 -37 413 150 44 9 chr17 55943324 55943437 -29495043 + GA-rich Low_complexity Low_complexity 5 121 0 215 215 77 31 chr17 55943805 55943870 -29494610 - MIR SINE MIR -75 187 120 441 305 59 11 chr17 55943892 55944079 -29494401 + MIR SINE MIR 18 213 -49 899 172 83 6 chr17 55944465 55944645 -29493835 + AluJo SINE Alu 106 299 -13 373 332 73 9 chr17 55946045 55946289 -29492191 - MER66-int LTR ERV1 -5022 1654 506 1525 185 17 42 chr17 55947420 55947581 -29490899 - AluJb SINE Alu -21 291 139 1832 151 3 17 chr17 55947581 55947873 -29490607 - AluSx SINE Alu -24 288 1 1525 185 17 42 chr17 55947873 55947998 -29490482 - AluJb SINE Alu -173 139 12 620 310 193 51 chr17 55949057 55949713 -29488767 - L2 LINE L2 -33 3280 2719 2166 121 10 0 chr17 55949713 55950011 -29488469 + AluSq SINE Alu 1 301 -12 620 310 193 51 chr17 55950011 55950516 -29487964 - L2 LINE L2 -594 2719 1162 971 190 25 0 chr17 55950594 55950757 -29487723 + AluJb SINE Alu 137 303 -9 1836 180 3 3 chr17 55950879 55951179 -29487301 - AluJb SINE Alu -12 300 1 2244 107 0 7 chr17 55951343 55951643 -29486837 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr17 55953875 55953899 -29484581 + AT_rich Low_complexity Low_complexity 1 24 0 1991 89 0 11 chr17 55956838 55957109 -29481371 + AluY SINE Alu 30 297 -14 1056 156 0 49 chr17 55957700 55957924 -29480556 - MER20 DNA MER1_type 0 219 7 929 76 8 0 chr17 55958159 55958277 -29480203 + FLAM_C SINE Alu 4 122 -21 279 0 0 0 chr17 55958305 55958336 -29480144 + (CA)n Simple_repeat Simple_repeat 1 31 0 384 244 92 49 chr17 55958387 55958551 -29479929 - MER5B DNA MER1_type -6 172 2 381 271 33 53 chr17 55958567 55958718 -29479762 + MER5B DNA MER1_type 30 177 -1 630 143 38 148 chr17 55958769 55958979 -29479501 - MER5A DNA MER1_type -2 187 1 202 349 48 0 chr17 55959336 55959419 -29479061 + MIR SINE MIR 45 131 -77 392 318 47 14 chr17 55960518 55960666 -29477814 + MIR SINE MIR 5 157 -105 189 237 51 17 chr17 55960781 55960840 -29477640 - MIR SINE MIR -108 154 94 * 657 297 132 38 chr17 55960838 55961286 -29477194 - L2 LINE L2 -6 3307 2818 239 240 10 21 chr17 55962073 55962169 -29476311 - L1MC4 LINE L1 -198 7844 7750 1280 202 60 21 chr17 55962176 55962508 -29475972 - MLT1A2 LTR MaLR -5 369 25 2694 205 76 76 chr17 55962528 55962708 -29475772 - L1MC4 LINE L1 -292 7750 7571 688 184 64 0 chr17 55962708 55962833 -29475647 - FLAM_C SINE Alu 0 133 1 2694 205 76 76 chr17 55962833 55963652 -29474828 - L1MC4 LINE L1 -470 7572 6751 271 250 0 0 chr17 55963711 55963771 -29474709 - L1MC4 LINE L1 -1524 6518 6459 302 325 34 43 chr17 55964068 55964185 -29474295 - MIR SINE MIR -77 131 16 394 225 0 0 chr17 55965467 55965538 -29472942 + MER45A DNA AcHobo 1 71 -107 2322 180 20 11 chr17 55965539 55965995 -29472485 - MER66B LTR ERV1 0 486 27 268 228 18 0 chr17 55965997 55966054 -29472426 + MER45A DNA AcHobo 47 104 -74 1214 104 0 18 chr17 55966055 55966219 -29472261 - AluSg/x SINE Alu -18 294 134 492 139 0 0 chr17 55966219 55966298 -29472182 + MER45A DNA AcHobo 100 178 0 676 287 198 25 chr17 55966594 55967056 -29471424 + L2 LINE L2 2776 3313 0 3062 123 16 18 chr17 55967226 55967460 -29471020 + LOR1a LTR ERV1 1 234 -263 2152 163 0 3 chr17 55967460 55967798 -29470682 + MER1B DNA MER1_type 1 337 0 3062 123 16 18 chr17 55967798 55968061 -29470419 + LOR1a LTR ERV1 234 497 0 1539 181 74 19 chr17 55968173 55968498 -29469982 - MER2 DNA MER2_type 0 344 2 221 328 56 32 chr17 55969071 55969196 -29469284 - MIR3 SINE MIR -4 204 77 202 208 38 0 chr17 55969653 55969706 -29468774 + A-rich Low_complexity Low_complexity 2 56 0 25 31 0 0 chr17 55969734 55969766 -29468714 + AT_rich Low_complexity Low_complexity 1 32 0 339 360 0 0 chr17 55969819 55969944 -29468536 - L1ME LINE L1 -298 5823 5699 291 119 0 0 chr17 55970494 55970536 -29467944 + 5S rRNA rRNA 1 42 -79 21 36 0 0 chr17 55971205 55971233 -29467247 + AT_rich Low_complexity Low_complexity 1 28 0 1509 123 124 29 chr17 55971265 55971699 -29466781 - MER51A LTR ERV1 0 634 1 1306 124 29 75 chr17 55971738 55971979 -29466501 - MER30 DNA MER1_type 0 230 1 333 315 75 28 chr17 55971995 55972587 -29465893 + L1ME4a LINE L1 4487 5108 -1038 627 254 102 25 chr17 55972703 55973018 -29465462 + L1ME4a LINE L1 5255 5593 -2215 338 74 19 0 chr17 55973504 55973558 -29464922 + (TG)n Simple_repeat Simple_repeat 2 56 0 391 313 55 22 chr17 55973824 55974006 -29464474 + MIR SINE MIR 2 189 -73 233 370 71 16 chr17 55974386 55974513 -29463967 - MIR SINE MIR -79 183 50 2590 48 3 7 chr17 55975242 55975552 -29462928 - AluY SINE Alu -2 309 1 428 325 21 71 chr17 55975749 55975989 -29462491 - HAL1 LINE L1 -2279 228 1 434 189 25 41 chr17 55975992 55976114 -29462366 - L1MA10 LINE L1 -1 6333 6214 219 36 0 0 chr17 55976240 55976268 -29462212 + (CAA)n Simple_repeat Simple_repeat 2 29 0 226 322 35 0 chr17 55976300 55976387 -29462093 + MIR3 SINE MIR 111 200 -8 972 211 0 0 chr17 55977384 55977555 -29460925 + FAM SINE Alu 3 173 -2 23 86 0 0 chr17 55977601 55977659 -29460821 + AT_rich Low_complexity Low_complexity 1 58 0 519 245 266 28 chr17 55977664 55978097 -29460383 - MLT1H LTR MaLR 0 549 14 234 220 0 17 chr17 55978235 55978294 -29460186 + (TA)n Simple_repeat Simple_repeat 2 59 0 1762 233 29 69 chr17 55978316 55978871 -29459609 - L1MC4a LINE L1 -1879 5929 5389 355 287 88 72 chr17 55978888 55979195 -29459285 + L1ME4a LINE L1 5717 6028 -93 2108 101 17 3 chr17 55979401 55979698 -29458782 + AluSx SINE Alu 1 301 -11 2140 79 43 0 chr17 55980023 55980303 -29458177 - AluY SINE Alu -19 292 1 192 346 98 33 chr17 55980436 55980589 -29457891 + MIR SINE MIR 76 238 -24 2930 123 98 36 chr17 55981138 55981636 -29456844 + MER1A DNA MER1_type 1 529 0 2166 103 16 19 chr17 55982672 55982982 -29455498 + AluSx SINE Alu 2 310 -2 1495 189 107 45 chr17 55984050 55984469 -29454011 - MER39 LTR ERV1 -2 705 261 251 326 22 0 chr17 55984443 55984535 -29453945 - LTR48B LTR ERV1 -540 104 11 * 198 0 0 0 chr17 55985655 55985677 -29452803 + (TAAAA)n Simple_repeat Simple_repeat 1 22 0 231 217 0 0 chr17 55985865 55985925 -29452555 + (TA)n Simple_repeat Simple_repeat 2 61 0 41 21 0 0 chr17 55986844 55986892 -29451588 + AT_rich Low_complexity Low_complexity 1 48 0 249 83 0 0 chr17 55987109 55987145 -29451335 + (T)n Simple_repeat Simple_repeat 1 36 0 2489 54 35 3 chr17 55987145 55987461 -29451019 - LTR17 LTR ERV1 -454 326 1 2397 51 0 0 chr17 55987461 55987753 -29450727 - HERV17 LTR ERV1 0 8626 8335 286 77 0 0 chr17 55987743 55987782 -29450698 - HERV17 LTR ERV1 -1078 7548 7510 * 291 0 0 0 chr17 55987775 55987807 -29450673 - HERV17 LTR ERV1 -2607 6019 5988 47432 47 16 2 chr17 55987823 55993616 -29444864 - HERV17 LTR ERV1 -2755 5871 1 3681 75 46 2 chr17 55993616 55994119 -29444361 - LTR17 LTR ERV1 0 780 256 1155 202 114 64 chr17 55994159 55994580 -29443900 - LTR7 LTR ERV1 -8 442 1 257 309 0 12 chr17 55994596 55994677 -29443803 + L2 LINE L2 3234 3313 0 325 279 35 89 chr17 55994749 55995007 -29443473 - L1MEd LINE L1 -3990 2139 1896 609 278 67 37 chr17 55995210 55995936 -29442544 - L1MEd LINE L1 -4579 1731 942 207 0 0 0 chr17 55996068 55996091 -29442389 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 2152 108 3 0 chr17 55996156 55996444 -29442036 + AluSq SINE Alu 1 289 -24 299 298 133 21 chr17 55996633 55996821 -29441659 - L1MEd LINE L1 -5637 482 274 1586 166 32 11 chr17 55996865 55997143 -29441337 + AluJo SINE Alu 5 288 -24 415 312 75 5 chr17 55997474 55997673 -29440807 + L1ME LINE L1 5574 5786 -335 584 312 164 40 chr17 55998051 55998569 -29439911 - L2 LINE L2 -5 3308 2721 312 333 41 51 chr17 55998830 55998897 -29439583 + L1ME3 LINE L1 2 68 -6051 1444 168 68 48 chr17 55998897 55999249 -29439231 - MER46B DNA MER2_type -2 234 1 312 333 41 51 chr17 55999249 55999376 -29439104 + L1ME3 LINE L1 68 194 -5925 240 35 0 0 chr17 55999538 55999567 -29438913 + (A)n Simple_repeat Simple_repeat 1 29 0 411 309 162 24 chr17 55999570 55999910 -29438570 + L1MC/D LINE L1 5271 5657 -509 699 295 17 29 chr17 56000030 56000271 -29438209 + MLT1I LTR MaLR 170 407 -2 268 227 47 50 chr17 56000273 56000420 -29438060 + L1MC/D LINE L1 5688 5827 -335 2433 54 0 14 chr17 56000477 56000773 -29437707 + AluY SINE Alu 1 292 -19 21 0 0 0 chr17 56000773 56000794 -29437686 + AT_rich Low_complexity Low_complexity 1 21 0 586 266 27 9 chr17 56000803 56001025 -29437455 + L1ME3 LINE L1 3286 3511 -2618 3182 204 39 69 chr17 56001028 56001956 -29436524 + L1ME3 LINE L1 3787 4686 -1443 1947 305 82 21 chr17 56001973 56002995 -29435485 + L1PBa LINE L1 3 1086 -5777 1103 135 45 10 chr17 56002995 56003195 -29435285 + L1PB3 LINE L1 5948 6154 0 22 0 0 0 chr17 56003567 56003589 -29434891 + AT_rich Low_complexity Low_complexity 1 22 0 29 0 0 0 chr17 56003767 56003796 -29434684 + AT_rich Low_complexity Low_complexity 1 29 0 316 281 135 62 chr17 56003855 56004143 -29434337 + L1ME4a LINE L1 5704 6012 -109 437 181 21 43 chr17 56004149 56004243 -29434237 + MER20 DNA MER1_type 1 92 -127 21 36 0 0 chr17 56004288 56004316 -29434164 + AT_rich Low_complexity Low_complexity 1 28 0 630 296 68 52 chr17 56004329 56004835 -29433645 + L1ME3 LINE L1 5351 5866 -287 22 70 0 0 chr17 56005021 56005064 -29433416 + AT_rich Low_complexity Low_complexity 1 43 0 390 277 50 38 chr17 56005380 56005539 -29432941 + L2 LINE L2 3149 3309 -4 900 293 38 81 chr17 56005689 56006218 -29432262 - MLT1J LTR MaLR 0 511 6 1150 231 13 0 chr17 56007284 56007518 -29430962 + MER8 DNA MER2_type 2 238 -1 245 261 0 14 chr17 56007694 56007763 -29430717 - L1ME LINE L1 -523 5598 5531 988 240 13 63 chr17 56008479 56008712 -29429768 + HAL1 LINE L1 739 948 -1559 2172 112 0 0 chr17 56008712 56009035 -29429445 + AluSx SINE Alu 1 323 0 988 240 13 63 chr17 56009035 56009179 -29429301 + HAL1 LINE L1 948 1098 -1409 473 230 118 43 chr17 56009254 56009415 -29429065 + MIR SINE MIR 80 252 -10 501 214 44 140 chr17 56010209 56010480 -29428000 - L1ME3A LINE L1 -20 6150 5906 23 33 0 0 chr17 56010604 56010634 -29427846 + AT_rich Low_complexity Low_complexity 1 30 0 882 224 75 25 chr17 56010903 56011301 -29427179 - Charlie2 DNA MER1_type -157 2705 2288 1544 135 66 10 chr17 56011501 56011804 -29426676 - L1MA8 LINE L1 -6 6285 5966 235 307 59 0 chr17 56011875 56011976 -29426504 - L1ME LINE L1 -1560 4586 4480 27 49 0 0 chr17 56011976 56012017 -29426463 + AT_rich Low_complexity Low_complexity 1 41 0 27 81 0 0 chr17 56012061 56012123 -29426357 + AT_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr17 56012524 56012549 -29425931 + AT_rich Low_complexity Low_complexity 1 25 0 29 0 0 0 chr17 56013265 56013294 -29425186 + AT_rich Low_complexity Low_complexity 1 29 0 366 217 93 31 chr17 56013324 56013453 -29425027 + MER112 DNA MER1_type 66 202 -58 735 207 162 37 chr17 56013804 56014075 -29424405 - L1ME3 LINE L1 -7 6155 5851 396 262 37 0 chr17 56014461 56014568 -29423912 - MER112 DNA MER1_type -45 215 105 1468 183 52 7 chr17 56016850 56017140 -29421340 - AluJb SINE Alu -9 303 1 229 274 65 24 chr17 56017322 56017446 -29421034 - MER103 DNA DNA -6 160 32 437 205 256 13 chr17 56017873 56018029 -29420451 + MIR SINE MIR 69 262 0 974 210 12 36 chr17 56018206 56018454 -29420026 - Charlie7 DNA MER1_type -2058 554 313 1689 176 0 34 chr17 56019457 56019780 -29418700 - AluJb SINE Alu 0 312 1 24 61 0 0 chr17 56019970 56020003 -29418477 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr17 56020118 56020140 -29418340 + AT_rich Low_complexity Low_complexity 1 22 0 749 184 0 22 chr17 56020140 56020276 -29418204 + FLAM_C SINE Alu 1 133 -10 562 180 0 0 chr17 56020292 56020381 -29418099 + L1MC1 LINE L1 6231 6319 -14 546 339 89 3 chr17 56020506 56020822 -29417658 - L1MC4a LINE L1 -1942 5866 5524 184 153 40 58 chr17 56021784 56021839 -29416641 - MIR SINE MIR -68 140 92 22 35 0 0 chr17 56022111 56022140 -29416340 + AT_rich Low_complexity Low_complexity 1 29 0 312 120 0 0 chr17 56022792 56022842 -29415638 + (TG)n Simple_repeat Simple_repeat 1 50 0 287 253 81 91 chr17 56022845 56023066 -29415414 + MARNA DNA Mariner 10 228 -358 242 241 0 0 chr17 56023071 56023125 -29415355 + T-rich Low_complexity Low_complexity 1 54 0 448 297 59 44 chr17 56024572 56024912 -29413568 + HAL1b LINE L1 311 655 -693 327 330 58 14 chr17 56025389 56025683 -29412797 + L1MC4 LINE L1 3395 3701 -2445 * 411 317 73 0 chr17 56025678 56025883 -29412597 + L1MC4 LINE L1 4140 4359 -1787 * 547 215 26 38 chr17 56025879 56026075 -29412405 + L1MC4 LINE L1 5274 5471 -699 2041 132 13 0 chr17 56026286 56026590 -29411890 - AluSx SINE Alu -4 308 1 755 284 114 40 chr17 56026627 56027063 -29411417 + L1MC4 LINE L1 5913 6316 -1492 222 37 0 0 chr17 56027063 56027090 -29411390 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 755 284 114 40 chr17 56027090 56027235 -29411245 + L1MC4 LINE L1 6316 6449 -1359 797 213 88 0 chr17 56027235 56027395 -29411085 + FAM SINE Alu 1 174 -1 755 284 114 40 chr17 56027395 56027539 -29410941 + L1MC4 LINE L1 6449 6616 -1192 267 193 0 35 chr17 56027617 56027674 -29410806 - Tigger5 DNA MER2_type -2268 55 1 2530 314 84 49 chr17 56027674 56028457 -29410023 + L1MC4 LINE L1 6689 7530 -512 315 0 0 0 chr17 56028457 56028492 -29409988 + (TG)n Simple_repeat Simple_repeat 1 35 0 2530 314 84 49 chr17 56028492 56028896 -29409584 + L1MC4 LINE L1 7530 7918 -124 377 230 3 2 chr17 56029081 56029181 -29409299 + L1MC4 LINE L1 7893 8036 -2 1918 155 10 7 chr17 56029745 56030048 -29408432 + AluSx SINE Alu 1 304 -8 598 285 89 5 chr17 56030079 56030293 -29408187 + MIR SINE MIR 21 252 -10 752 208 110 121 chr17 56030882 56031319 -29407161 + L2 LINE L2 2465 2896 -418 430 249 111 39 chr17 56031356 56031537 -29406943 + L2 LINE L2 3119 3312 -1 4249 175 51 98 chr17 56031629 56032162 -29406318 - Charlie5 DNA MER1_type 0 2624 2067 562 175 0 0 chr17 56032162 56032259 -29406221 + AluJb SINE Alu 203 299 -13 593 186 0 31 chr17 56032261 56032390 -29406090 + FLAM_C SINE Alu 1 125 -8 4249 175 51 98 chr17 56032390 56033072 -29405408 - Charlie5 DNA MER1_type -558 2066 1372 6647 60 6 1 chr17 56033080 56033940 -29404540 - L1PA8 LINE L1 -1 6171 5308 1653 217 156 2 chr17 56033940 56034377 -29404103 - Charlie5 DNA MER1_type -1226 1386 883 2560 184 113 36 chr17 56034382 56035168 -29403312 - Charlie5 DNA MER1_type -2490 122 1 368 226 247 14 chr17 56035175 56035321 -29403159 + MER5A DNA MER1_type 9 188 -1 1301 161 51 4 chr17 56037141 56037377 -29401103 - L1MD2 LINE L1 -309 6050 5804 613 233 8 0 chr17 56037371 56037500 -29400980 + L1MD2 LINE L1 6151 6280 -79 * 595 192 0 0 chr17 56037510 56037614 -29400866 + FLAM_C SINE Alu 18 121 -22 6057 53 1 12 chr17 56037631 56038404 -29400076 - L1PA7 LINE L1 0 6154 5390 1895 87 4 43 chr17 56040046 56040322 -29398158 - AluSg SINE Alu -23 287 23 1819 177 0 0 chr17 56041736 56042064 -29396416 - AluSx SINE Alu 0 328 1 24 67 0 0 chr17 56042084 56042129 -29396351 + AT_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr17 56042226 56042266 -29396214 + AT_rich Low_complexity Low_complexity 1 40 0 634 184 0 72 chr17 56042268 56042420 -29396060 + AluSg/x SINE Alu 136 276 -36 188 316 122 58 chr17 56044285 56044424 -29394056 - MIR SINE MIR -95 167 20 22 0 0 0 chr17 56044695 56044717 -29393763 + AT_rich Low_complexity Low_complexity 1 22 0 994 225 63 0 chr17 56045642 56045864 -29392616 + MIR SINE MIR 3 238 -24 1429 230 88 79 chr17 56046539 56047259 -29391221 + L2 LINE L2 2513 3272 0 453 281 117 24 chr17 56047649 56047876 -29390604 + MIR SINE MIR 3 251 -11 24 77 0 0 chr17 56048278 56048330 -29390150 + AT_rich Low_complexity Low_complexity 1 52 0 2118 108 3 3 chr17 56049173 56049468 -29389012 - AluSq SINE Alu -16 297 3 21 0 0 0 chr17 56050097 56050118 -29388362 + AT_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr17 56050545 56050593 -29387887 + AT_rich Low_complexity Low_complexity 1 48 0 1277 277 62 9 chr17 56050786 56051316 -29387164 - L1ME3A LINE L1 -219 5934 5377 727 262 76 0 chr17 56051317 56051489 -29386991 - MER63A DNA MER1_type 0 210 26 439 255 78 10 chr17 56051489 56051681 -29386799 - L1ME3A LINE L1 -751 5378 5174 1289 307 91 25 chr17 56051877 56053011 -29385469 - L1MEd LINE L1 -4517 1612 417 396 0 0 0 chr17 56053230 56053274 -29385206 + (TG)n Simple_repeat Simple_repeat 2 45 0 180 0 0 0 chr17 56053340 56053360 -29385120 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1420 184 3 62 chr17 56055025 56055330 -29383150 + AluJo SINE Alu 1 287 -25 2789 244 34 20 chr17 56057527 56058268 -29380212 - MER20B DNA MER1_type -31 752 2 1429 186 7 52 chr17 56058517 56058824 -29379656 - AluSx SINE Alu -19 293 1 24 0 0 0 chr17 56058898 56058922 -29379558 + AT_rich Low_complexity Low_complexity 1 24 0 1257 231 174 35 chr17 56059022 56059541 -29378939 - MLT1H1 LTR MaLR 0 555 13 1989 38 4 0 chr17 56059552 56059792 -29378688 - L1P3 LINE L1 -524 5630 5390 1634 103 4 55 chr17 56061449 56061721 -29376759 - AluSg SINE Alu -30 280 23 1819 177 0 0 chr17 56063135 56063458 -29375022 - AluSx SINE Alu 0 323 1 24 67 0 0 chr17 56063478 56063523 -29374957 + AT_rich Low_complexity Low_complexity 1 45 0 26 50 0 0 chr17 56063620 56063660 -29374820 + AT_rich Low_complexity Low_complexity 1 40 0 634 184 0 72 chr17 56063662 56063814 -29374666 + AluSg/x SINE Alu 136 276 -36 715 143 7 64 chr17 56065611 56065751 -29372729 + FRAM SINE Alu 29 160 -16 2803 243 34 20 chr17 56067940 56068681 -29369799 - MER20B DNA MER1_type -31 752 2 1429 186 7 52 chr17 56068930 56069237 -29369243 - AluSx SINE Alu -19 293 1 24 0 0 0 chr17 56069311 56069335 -29369145 + AT_rich Low_complexity Low_complexity 1 24 0 1257 231 174 35 chr17 56069435 56069955 -29368525 - MLT1H1 LTR MaLR 0 555 13 5179 21 0 0 chr17 56069970 56070823 -29367657 - L1PA3 LINE L1 -529 5626 4774 4305 22 10 0 chr17 56070823 56071329 -29367151 + L1PA3 LINE L1 5642 6155 0 2300 122 3 0 chr17 56072218 56072578 -29365902 - L1MA5A LINE L1 0 6297 5937 4697 135 30 20 chr17 56072596 56073904 -29364576 - L1MA5A LINE L1 -507 5790 4456 2007 105 0 4 chr17 56074392 56074658 -29363822 - AluSq SINE Alu -48 265 1 199 309 32 21 chr17 56074808 56074902 -29363578 - L3 LINE CR1 -69 1508 1414 244 301 98 43 chr17 56075006 56075169 -29363311 + MIR SINE MIR 91 262 0 498 17 0 0 chr17 56076797 56076856 -29361624 + (TG)n Simple_repeat Simple_repeat 2 60 0 325 286 0 11 chr17 56077152 56077243 -29361237 + L1ME LINE L1 5523 5612 -509 1214 128 16 91 chr17 56077380 56077623 -29360857 + Tigger4(Zombi) DNA MER2_type 1 225 -2506 1191 115 64 165 chr17 56077611 56077968 -29360512 + Tigger4(Zombi) DNA MER2_type 2411 2731 0 * 1899 102 7 3 chr17 56077990 56078273 -29360207 + L1PB1 LINE L1 5863 6146 -5 225 214 79 64 chr17 56078290 56078430 -29360050 - Charlie7 DNA MER1_type -172 2440 2299 1931 137 19 3 chr17 56078944 56079251 -29359229 - AluSx SINE Alu 0 312 1 974 301 102 49 chr17 56079753 56080449 -29358031 - L2 LINE L2 -1 3312 2569 304 311 43 62 chr17 56081676 56081837 -29356643 - MIR SINE MIR -79 183 26 399 248 23 31 chr17 56081848 56081977 -29356503 + HsTC2c DNA Tc2 601 728 -1 1351 159 5 9 chr17 56082115 56082335 -29356145 - AluJb SINE Alu -9 303 85 239 294 0 59 chr17 56082890 56082975 -29355505 + L2 LINE L2 3229 3308 -5 226 280 131 19 chr17 56083221 56083328 -29355152 + MIR SINE MIR 88 206 -56 2451 62 3 0 chr17 56083345 56083636 -29354844 + AluY SINE Alu 3 294 -17 360 286 95 14 chr17 56083763 56083910 -29354570 + MIR SINE MIR 51 209 -53 209 208 0 21 chr17 56083957 56084005 -29354475 + (CAT)n Simple_repeat Simple_repeat 2 48 0 689 192 8 0 chr17 56084491 56084621 -29353859 - L2 LINE L2 -314 2999 2869 634 277 98 29 chr17 56084635 56084909 -29353571 + L2 LINE L2 3005 3297 -16 377 316 82 23 chr17 56085002 56085258 -29353222 + L1ME LINE L1 5412 5682 -439 1749 188 42 6 chr17 56085271 56085601 -29352879 - MER7A DNA MER2_type -5 341 2 204 40 0 0 chr17 56086222 56086247 -29352233 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 781 257 98 25 chr17 56086634 56086879 -29351601 + MLT1E LTR MaLR 1 263 -330 965 208 21 0 chr17 56086914 56087106 -29351374 + MLT1E LTR MaLR 397 592 -1 260 342 51 0 chr17 56087457 56087536 -29350944 + L2 LINE L2 3186 3268 -4 31300 109 14 56 chr17 56088092 56091426 -29347054 - L1PA7 LINE L1 -3 6151 3226 2301 88 0 34 chr17 56091426 56091746 -29346734 - AluY SINE Alu -2 309 1 31300 109 14 56 chr17 56091746 56094831 -29343649 - L1PA7 LINE L1 -2928 3226 12 314 325 62 82 chr17 56095324 56095546 -29342934 - L2 LINE L2 0 3272 3060 1904 189 62 62 chr17 56095546 56095593 -29342887 - MLT1D LTR MaLR -3 502 456 2184 108 0 29 chr17 56095593 56095907 -29342573 - AluSq SINE Alu -8 305 1 1904 189 62 62 chr17 56095907 56096361 -29342119 - MLT1D LTR MaLR -48 457 1 314 325 62 82 chr17 56096361 56096554 -29341926 - L2 LINE L2 -212 3060 2865 1069 188 35 10 chr17 56096554 56096756 -29341724 - MER58A DNA MER1_type -6 218 12 1141 263 143 30 chr17 56097073 56097378 -29341102 + L2 LINE L2 2618 2887 -426 2442 156 31 7 chr17 56097378 56097796 -29340684 + MSTA LTR MaLR 1 428 0 1141 263 143 30 chr17 56097796 56097864 -29340616 + L2 LINE L2 2887 2946 -367 324 0 0 0 chr17 56097864 56097900 -29340580 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1575 200 0 14 chr17 56097903 56098188 -29340292 - AluJo SINE Alu -31 281 1 1141 263 143 30 chr17 56098188 56098413 -29340067 + L2 LINE L2 2947 3313 0 815 176 79 8 chr17 56099137 56099186 -29339294 + L1MA9 LINE L1 6103 6147 -153 405 0 0 0 chr17 56099186 56099231 -29339249 + (CA)n Simple_repeat Simple_repeat 1 45 0 815 176 79 8 chr17 56099231 56099362 -29339118 + L1MA9 LINE L1 6147 6300 0 235 301 14 0 chr17 56099668 56099741 -29338739 - L1ME4a LINE L1 -81 6040 5967 509 283 29 0 chr17 56099827 56099965 -29338515 + MIR SINE MIR 2 143 -119 21 0 0 0 chr17 56103032 56103053 -29335427 + AT_rich Low_complexity Low_complexity 1 21 0 271 215 228 25 chr17 56103816 56103895 -29334585 - L2 LINE L2 -5 3267 3173 658 323 111 18 chr17 56103995 56104329 -29334151 - L2 LINE L2 0 3313 2949 1045 305 65 8 chr17 56104383 56104770 -29333710 - L2 LINE L2 -910 2404 1996 25 0 0 0 chr17 56104908 56104933 -29333547 + AT_rich Low_complexity Low_complexity 1 25 0 1018 48 0 0 chr17 56104933 56105058 -29333422 - L1PA5 LINE L1 -9 6145 6021 30 27 0 0 chr17 56105621 56105658 -29332822 + AT_rich Low_complexity Low_complexity 1 37 0 256 345 55 9 chr17 56106433 56106543 -29331937 + L3 LINE CR1 1293 1407 -170 482 303 61 48 chr17 56106647 56106812 -29331668 + MER91A DNA MER1_type 4 170 -26 231 298 110 73 chr17 56107705 56107950 -29330530 + MLT1L LTR MaLR 214 467 -148 271 407 73 23 chr17 56108137 56108437 -29330043 - L2 LINE L2 -10 3262 2948 21 0 0 0 chr17 56108744 56108765 -29329715 + AT_rich Low_complexity Low_complexity 1 21 0 2258 103 0 3 chr17 56109587 56109889 -29328591 + AluSc SINE Alu 1 301 -8 25 51 0 0 chr17 56110364 56110403 -29328077 + AT_rich Low_complexity Low_complexity 1 39 0 1229 239 30 70 chr17 56110661 56111059 -29327421 - MLT1B LTR MaLR -8 382 1 239 313 72 0 chr17 56111274 56111357 -29327123 + MIR3 SINE MIR 108 196 -12 2417 253 50 43 chr17 56111363 56111595 -29326885 + L1ME LINE L1 2 231 -5839 505 235 99 25 chr17 56111595 56111757 -29326723 - MER96 DNA MER1_type 0 175 2 2417 253 50 43 chr17 56111757 56112401 -29326079 + L1ME LINE L1 231 884 -5186 757 225 21 16 chr17 56112405 56112596 -29325884 + L1ME2 LINE L1 5963 6154 -10 229 161 109 102 chr17 56112947 56112965 -29325515 - L1MA9 LINE L1 0 6312 6295 1655 229 128 0 chr17 56112965 56113410 -29325070 - L1ME1 LINE L1 -8 6158 5657 264 258 16 0 chr17 56114129 56114191 -29324289 - L2 LINE L2 -3 3310 3248 330 26 0 0 chr17 56114565 56114604 -29323876 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1980 112 4 0 chr17 56114607 56114883 -29323597 - AluSx SINE Alu -35 277 1 2339 98 0 0 chr17 56114891 56115196 -29323284 - AluSc SINE Alu -4 305 1 215 310 20 20 chr17 56115203 56115303 -29323177 + CT-rich Low_complexity Low_complexity 1 100 0 659 223 0 8 chr17 56115418 56115548 -29322932 + FLAM_A SINE Alu 5 133 0 189 107 0 0 chr17 56115562 56115590 -29322890 + (GGGA)n Simple_repeat Simple_repeat 3 30 0 2393 166 124 59 chr17 56115730 56116310 -29322170 + MLT1E3 LTR MaLR 1 618 -6 5172 138 31 20 chr17 56116361 56117291 -29321189 - L1MA7 LINE L1 -5 6286 5347 1158 185 177 16 chr17 56117746 56117989 -29320491 - AluJb SINE Alu -18 284 3 2159 103 3 0 chr17 56118175 56118457 -29320023 - AluSg SINE Alu -27 283 1 3445 250 182 33 chr17 56118572 56120263 -29318217 - L2 LINE L2 0 3313 1344 763 237 48 31 chr17 56121904 56122132 -29316348 + MIR SINE MIR 10 241 -21 1587 205 55 8 chr17 56122332 56122698 -29315782 - MER63B DNA MER1_type -53 383 1 234 0 0 0 chr17 56123242 56123268 -29315212 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 315 246 239 0 chr17 56123375 56123509 -29314971 - L1ME LINE L1 -338 5783 5618 865 235 30 5 chr17 56123542 56123742 -29314738 + MIR SINE MIR 58 262 0 604 295 97 12 chr17 56123746 56124065 -29314415 - L1ME LINE L1 -2203 5605 5260 375 336 9 0 chr17 56124163 56124270 -29314210 + L2 LINE L2 3200 3307 -6 1666 199 0 13 chr17 56125990 56126296 -29312184 + AluJo SINE Alu 1 302 -10 198 264 135 73 chr17 56126898 56127076 -29311404 - L3 LINE CR1 -5 1572 1384 453 306 6 47 chr17 56127736 56127906 -29310574 - L2 LINE L2 -5 3308 3146 288 378 81 22 chr17 56127915 56128100 -29310380 - MIR SINE MIR -66 196 1 289 273 201 14 chr17 56128423 56128562 -29309918 + MIR SINE MIR 85 249 -13 201 202 48 125 chr17 56129050 56129154 -29309326 - MIR SINE MIR -10 252 157 332 264 96 24 chr17 56129844 56129969 -29308511 - MIR SINE MIR -100 162 29 405 0 0 0 chr17 56129974 56130019 -29308461 + (CA)n Simple_repeat Simple_repeat 1 45 0 509 291 47 17 chr17 56130818 56130990 -29307490 + MIR SINE MIR 78 254 -8 210 91 0 0 chr17 56131686 56131719 -29306761 + (TG)n Simple_repeat Simple_repeat 2 34 0 965 229 127 94 chr17 56132209 56132398 -29306082 - MLT1F LTR MaLR -11 531 350 2415 68 0 19 chr17 56132398 56132707 -29305773 + AluY SINE Alu 1 303 -8 965 229 127 94 chr17 56132707 56133029 -29305451 - MLT1F LTR MaLR -192 350 3 2023 162 34 6 chr17 56133131 56133459 -29305021 - MER1B DNA MER1_type 0 337 1 523 279 37 21 chr17 56133717 56133907 -29304573 + MER117 DNA MER1_type 1 193 -4 2200 108 24 0 chr17 56134503 56134800 -29303680 - AluSx SINE Alu -8 304 1 233 211 53 0 chr17 56135208 56135265 -29303215 + L2 LINE L2 3250 3309 -4 502 304 42 50 chr17 56135303 56135543 -29302937 + MIR SINE MIR 20 257 -5 1301 180 102 62 chr17 56136137 56136509 -29301971 - MLT1B LTR MaLR 0 390 4 1436 197 129 60 chr17 56136727 56137192 -29301288 + MLT1D LTR MaLR 4 588 -5 273 221 95 5 chr17 56137228 56137308 -29301172 + MIR SINE MIR 71 154 -67 203 338 128 0 chr17 56138154 56138287 -29300193 - L2 LINE L2 0 3313 3164 1748 137 55 66 chr17 56138403 56138782 -29299698 - THE1C LTR MaLR 0 375 1 466 284 85 14 chr17 56138977 56139118 -29299362 + MIR SINE MIR 3 153 -109 602 302 84 21 chr17 56140022 56140307 -29298173 - MLT1J2 LTR MaLR -84 366 64 28 99 0 0 chr17 56140824 56140915 -29297565 + AT_rich Low_complexity Low_complexity 1 91 0 455 188 158 0 chr17 56143910 56144011 -29294469 - MER103 DNA DNA -49 117 1 191 36 36 0 chr17 56144027 56144055 -29294425 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 819 181 28 28 chr17 56144055 56144199 -29294281 - FRAM SINE Alu -32 144 1 1812 165 0 4 chr17 56144935 56145245 -29293235 + AluSx SINE Alu 5 313 0 272 344 199 12 chr17 56145298 56145539 -29292941 - L2 LINE L2 -570 2744 2459 630 274 60 34 chr17 56147676 56147910 -29290570 - MIR SINE MIR -13 249 10 347 328 118 31 chr17 56147931 56148160 -29290320 + L3 LINE CR1 1327 1575 -2 310 218 64 0 chr17 56148423 56148501 -29289979 - L2 LINE L2 0 3313 3231 24 67 0 0 chr17 56148595 56148640 -29289840 + AT_rich Low_complexity Low_complexity 1 45 0 319 346 101 10 chr17 56148740 56148948 -29289532 - L1MC4a LINE L1 -1907 5901 5675 330 255 51 0 chr17 56149029 56149127 -29289353 - L1MC4a LINE L1 -2184 5624 5522 218 208 0 19 chr17 56149461 56149513 -29288967 + MIR SINE MIR 104 153 -62 233 171 0 0 chr17 56149539 56149580 -29288900 - L2 LINE L2 -8 3264 3224 2815 13 0 6 chr17 56150403 56150720 -29287760 - AluYb8 SINE Alu -3 315 1 186 139 28 0 chr17 56150801 56150837 -29287643 + L2 LINE L2 3157 3193 -79 293 369 46 15 chr17 56150837 56150967 -29287513 - L2 LINE L2 0 3272 3139 1840 209 3 11 chr17 56151611 56151979 -29286501 + MLT1A1 LTR MaLR 1 365 0 206 337 52 41 chr17 56152250 56152422 -29286058 + L2 LINE L2 2584 2757 -557 195 204 0 0 chr17 56154161 56154205 -29284275 + (TG)n Simple_repeat Simple_repeat 2 45 0 203 0 37 0 chr17 56154209 56154236 -29284244 + (CA)n Simple_repeat Simple_repeat 2 29 0 1369 281 89 13 chr17 56154442 56155058 -29283422 - HsTC2a DNA Tc2 -25 719 57 358 315 127 50 chr17 56155073 56155330 -29283150 - LTR16C LTR ERVL -30 461 167 198 0 0 0 chr17 56155330 56155352 -29283128 + (TGGGGG)n Simple_repeat Simple_repeat 1 22 0 358 315 127 50 chr17 56155352 56155456 -29283024 - LTR16C LTR ERVL -324 167 72 279 215 15 0 chr17 56155522 56155587 -29282893 - HsTC2a DNA Tc2 -678 66 1 260 226 0 0 chr17 56156050 56156112 -29282368 + L1ME4a LINE L1 5545 5606 -515 345 254 191 26 chr17 56156200 56156389 -29282091 + L1ME4a LINE L1 5727 5946 -175 21 0 0 0 chr17 56156437 56156458 -29282022 + AT_rich Low_complexity Low_complexity 1 21 0 513 325 7 7 chr17 56157222 56157373 -29281107 - L3 LINE CR1 -3 1574 1424 372 80 0 0 chr17 56157619 56157669 -29280811 + MLT1C LTR MaLR 1 50 -417 816 166 10 78 chr17 56157689 56157894 -29280586 + MLT1C LTR MaLR 277 467 0 718 221 27 0 chr17 56158197 56158346 -29280134 + MER5B DNA MER1_type 15 167 -11 195 344 21 32 chr17 56158631 56158724 -29279756 - MIR SINE MIR -81 181 90 350 179 13 26 chr17 56158743 56158821 -29279659 - MER81 DNA DNA -36 78 2 219 278 56 14 chr17 56158858 56158930 -29279550 - MIR3 SINE MIR -26 182 108 2051 214 61 0 chr17 56159190 56159681 -29278799 - L1MD2 LINE L1 -227 6132 5612 1117 217 57 116 chr17 56159686 56160211 -29278269 - MLT1D LTR MaLR -7 498 5 1646 172 29 8 chr17 56160211 56160589 -29277891 - L1MD2 LINE L1 -567 5599 5219 1026 60 15 0 chr17 56160876 56161009 -29277471 + AluY SINE Alu 166 300 -11 332 287 88 81 chr17 56161467 56161924 -29276556 - LTR33 LTR ERVL -2 519 60 230 355 51 55 chr17 56162440 56162577 -29275903 - L2 LINE L2 -455 2859 2722 2302 142 17 144 chr17 56162577 56163167 -29275313 + MLT2B2 LTR ERVL 1 515 0 230 355 51 55 chr17 56163167 56163246 -29275234 - L2 LINE L2 -592 2722 2644 * 233 313 36 40 chr17 56163224 56163386 -29275094 + MIR SINE MIR 24 188 -71 338 313 110 6 chr17 56164167 56164330 -29274150 - MIR SINE MIR -3 259 80 * 401 261 101 35 chr17 56164314 56164513 -29273967 + MIR SINE MIR 32 243 -19 1790 191 127 32 chr17 56164514 56164979 -29273501 - MLT2B1 LTR ERVL 0 520 12 1943 140 101 55 chr17 56165487 56165902 -29272578 + Tigger2a DNA MER2_type 1 434 0 345 296 152 2 chr17 56166008 56166198 -29272282 + MIR SINE MIR 36 251 -11 183 385 77 26 chr17 56166541 56166658 -29271822 - MIR SINE MIR -65 143 21 23 33 0 0 chr17 56167272 56167302 -29271178 + AT_rich Low_complexity Low_complexity 1 30 0 357 299 86 32 chr17 56167565 56167752 -29270728 + L1ME LINE L1 365 561 -5855 625 268 123 49 chr17 56168352 56168933 -29269547 + L1ME LINE L1 1153 1965 -4642 376 328 37 41 chr17 56169000 56169268 -29269212 + L1ME LINE L1 2069 2335 -4272 911 134 0 0 chr17 56169272 56169399 -29269081 + FLAM_C SINE Alu 1 127 -16 474 282 99 31 chr17 56169409 56170088 -29268392 + L1ME LINE L1 2366 3054 -3372 311 250 105 13 chr17 56170084 56170236 -29268244 - L1M4 LINE L1 -1921 4225 4060 * 22 56 0 0 chr17 56170265 56170301 -29268179 + AT_rich Low_complexity Low_complexity 1 36 0 701 256 112 0 chr17 56170307 56170549 -29267931 - L1ME3A LINE L1 -19 6151 5883 960 250 83 79 chr17 56170564 56170845 -29267635 + L1MC4 LINE L1 7502 7780 -262 1759 161 14 0 chr17 56170845 56171137 -29267343 - AluJo SINE Alu -16 296 1 960 250 83 79 chr17 56171137 56171173 -29267307 + L1MC4 LINE L1 7780 7814 -228 1338 73 0 0 chr17 56171173 56171352 -29267128 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 960 250 83 79 chr17 56171352 56171529 -29266951 + L1MC4 LINE L1 7814 7999 -43 287 332 95 52 chr17 56171707 56171918 -29266562 - L2 LINE L2 -183 3089 2870 272 130 0 0 chr17 56172182 56172228 -29266252 - Alu SINE Alu -12 290 245 626 260 37 0 chr17 56173899 56174070 -29264410 - MIR SINE MIR -32 230 55 222 308 15 15 chr17 56174094 56174159 -29264321 + L2 LINE L2 3208 3272 0 344 268 31 0 chr17 56174213 56174310 -29264170 + MIR3 SINE MIR 68 167 -41 261 297 124 10 chr17 56175765 56175929 -29262551 + MIR3 SINE MIR 3 181 -61 437 231 77 0 chr17 56176129 56176233 -29262247 - L2 LINE L2 -5 3308 3197 301 287 65 19 chr17 56177092 56177200 -29261280 - MIR SINE MIR -113 149 37 286 214 282 0 chr17 56177228 56177331 -29261149 - MER5A DNA MER1_type 0 189 58 234 301 0 24 chr17 56177544 56177627 -29260853 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 1115 263 59 17 chr17 56177670 56178028 -29260452 - MER21B LTR ERV1 -78 785 413 688 258 26 11 chr17 56178611 56178801 -29259679 - MIR SINE MIR -26 236 44 320 232 143 62 chr17 56178853 56178965 -29259515 - MIR SINE MIR -129 133 13 216 0 0 0 chr17 56179614 56179638 -29258842 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 595 286 76 19 chr17 56180016 56180226 -29258254 - MIR SINE MIR -22 240 19 188 143 24 0 chr17 56180323 56180365 -29258115 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 1464 184 52 21 chr17 56181410 56181698 -29256782 - AluJb SINE Alu -9 303 7 276 250 53 40 chr17 56181707 56181783 -29256697 + L2 LINE L2 3132 3208 -64 642 188 29 77 chr17 56181800 56181970 -29256510 + MER20 DNA MER1_type 58 219 0 247 224 0 0 chr17 56181982 56182031 -29256449 + L2 LINE L2 3265 3313 0 351 283 200 8 chr17 56182586 56182706 -29255774 + L2 LINE L2 3126 3268 -4 608 171 72 88 chr17 56183016 56183197 -29255283 + MER5B DNA MER1_type 1 178 0 2284 107 0 0 chr17 56183430 56183740 -29254740 + AluY SINE Alu 1 310 -1 1938 107 133 5 chr17 56183882 56184365 -29254115 - MER51A LTR ERV1 -18 616 1 319 319 176 25 chr17 56185713 56186209 -29252271 + L2 LINE L2 2726 3296 -17 265 267 25 9 chr17 56186528 56186621 -29251859 - MIR SINE MIR -109 99 6 22 0 0 0 chr17 56187251 56187273 -29251207 + AT_rich Low_complexity Low_complexity 1 22 0 294 175 38 0 chr17 56187339 56187419 -29251061 + GA-rich Low_complexity Low_complexity 2 84 0 23 0 0 0 chr17 56187471 56187494 -29250986 + AT_rich Low_complexity Low_complexity 1 23 0 201 154 0 0 chr17 56188394 56188433 -29250047 + (TTAAA)n Simple_repeat Simple_repeat 3 41 0 221 263 113 38 chr17 56188513 56188593 -29249887 - MIR SINE MIR -104 104 19 253 383 25 38 chr17 56188792 56189027 -29249453 + MLT1K LTR MaLR 147 378 -210 218 302 93 88 chr17 56189057 56189239 -29249241 + L2 LINE L2 2907 3089 -183 261 289 53 0 chr17 56189567 56189643 -29248837 + L3 LINE CR1 1313 1392 -185 494 304 85 35 chr17 56189713 56190465 -29248015 - L1MEd LINE L1 -4818 1578 789 324 48 0 0 chr17 56190782 56190824 -29247656 + (CA)n Simple_repeat Simple_repeat 2 43 0 31 44 0 0 chr17 56191233 56191278 -29247202 + AT_rich Low_complexity Low_complexity 1 45 0 933 284 119 15 chr17 56191477 56191512 -29246968 + L1MC4a LINE L1 5282 5312 -839 285 75 0 0 chr17 56191512 56191552 -29246928 + (CA)n Simple_repeat Simple_repeat 1 40 0 933 284 119 15 chr17 56191552 56192087 -29246393 + L1MC4a LINE L1 5312 5576 -575 200 257 40 0 chr17 56192118 56192192 -29246288 + (TATG)n Simple_repeat Simple_repeat 4 80 0 2296 102 7 0 chr17 56192543 56192846 -29245634 + AluSq SINE Alu 1 305 -8 256 266 35 70 chr17 56193813 56193956 -29244524 + L1ME4a LINE L1 5984 6121 0 209 254 243 58 chr17 56194020 56194193 -29244287 - MIR SINE MIR -33 229 25 483 220 10 0 chr17 56194363 56194463 -29244017 + MER94 DNA DNA 3 103 -31 624 129 0 0 chr17 56194501 56194602 -29243878 + (GGAA)n Simple_repeat Simple_repeat 1 101 0 1953 156 0 0 chr17 56194768 56195056 -29243424 + AluSx SINE Alu 1 288 -24 215 224 239 0 chr17 56195463 56195530 -29242950 + MIR SINE MIR 90 172 -90 204 244 47 47 chr17 56195944 56196030 -29242450 + (CATG)n Simple_repeat Simple_repeat 2 87 0 270 284 45 75 chr17 56196651 56196852 -29241628 - L1ME4a LINE L1 -132 5989 5795 1051 101 0 25 chr17 56197192 56197351 -29241129 - AluSg/x SINE Alu 0 312 158 355 295 181 54 chr17 56197381 56197751 -29240729 - L1ME4a LINE L1 -1174 4972 4556 2160 94 9 38 chr17 56197768 56198088 -29240392 - AluSx SINE Alu -1 311 1 328 250 31 31 chr17 56198140 56198236 -29240244 + MIR SINE MIR 50 145 -117 197 132 19 113 chr17 56198267 56198320 -29240160 + L2 LINE L2 3266 3313 0 201 259 190 9 chr17 56198341 56198457 -29240023 + MIR SINE MIR 125 261 -1 1971 135 3 20 chr17 56199200 56199504 -29238976 + AluJo SINE Alu 1 299 -13 28 0 0 0 chr17 56200067 56200095 -29238385 + AT_rich Low_complexity Low_complexity 1 28 0 190 343 111 0 chr17 56200199 56200298 -29238182 - L3b LINE CR1 -4 1579 1470 2569 107 0 29 chr17 56200810 56201156 -29237324 - MER1B DNA MER1_type 0 337 2 3810 161 25 38 chr17 56201252 56201369 -29237111 + MER50 LTR ERV1 1 118 -616 2166 139 0 0 chr17 56201369 56201672 -29236808 + AluSx SINE Alu 1 303 -9 3810 161 25 38 chr17 56201672 56202274 -29236206 + MER50 LTR ERV1 118 711 -23 344 255 85 28 chr17 56203656 56203762 -29234718 + L3 LINE CR1 1246 1357 -220 469 289 0 0 chr17 56204198 56204319 -29234161 - L2 LINE L2 -3 3269 3149 2416 172 24 31 chr17 56204549 56204974 -29233506 - MSTB LTR MaLR -4 422 1 364 271 18 78 chr17 56206127 56206293 -29232187 + MIR SINE MIR 5 160 -102 911 204 58 62 chr17 56206293 56206553 -29231927 + MLT1J1 LTR MaLR 34 292 -154 3699 51 11 28 chr17 56206637 56207105 -29231375 - L1PB1 LINE L1 0 6151 5692 292 245 21 53 chr17 56207119 56207213 -29231267 + MIR SINE MIR 172 262 0 704 231 28 52 chr17 56207954 56208166 -29230314 + L2 LINE L2 3103 3309 -4 623 327 128 4 chr17 56208547 56208945 -29229535 + L3 LINE CR1 342 851 -726 1668 163 64 0 chr17 56209104 56209387 -29229093 - AluJo SINE Alu -11 301 1 2212 113 10 0 chr17 56210041 56210343 -29228137 + AluSx SINE Alu 1 305 -7 7089 30 0 0 chr17 56212442 56213359 -29225121 - L1PA4 LINE L1 -83 6072 5156 542 58 0 0 chr17 56213359 56213426 -29225054 + L1PA4 LINE L1 6084 6152 -3 185 296 80 11 chr17 56213631 56213719 -29224761 + L2 LINE L2 3145 3238 -34 317 329 78 30 chr17 56213796 56213963 -29224517 + L2 LINE L2 3096 3270 -2 669 25 0 0 chr17 56214260 56214339 -29224141 + (CATAG)n Simple_repeat Simple_repeat 2 80 0 315 324 22 22 chr17 56214556 56214695 -29223785 - MIR SINE MIR -19 243 105 616 292 72 13 chr17 56214756 56214992 -29223488 - MIR SINE MIR 0 262 13 2189 250 50 51 chr17 56215459 56215712 -29222768 + L2 LINE L2 2335 2587 -726 1070 177 14 36 chr17 56215712 56215932 -29222548 - MER20 DNA MER1_type -4 215 1 2189 250 50 51 chr17 56215932 56216639 -29221841 + L2 LINE L2 2587 3311 -2 326 285 97 14 chr17 56217356 56217500 -29220980 + MIR SINE MIR 107 262 0 324 0 0 0 chr17 56217742 56217778 -29220702 + (CA)n Simple_repeat Simple_repeat 2 37 0 211 231 0 144 chr17 56218263 56218367 -29220113 + MIR SINE MIR 174 262 0 706 266 125 51 chr17 56218447 56218759 -29219721 + MLT1I LTR MaLR 3 337 -72 1878 151 0 27 chr17 56218759 56218870 -29219610 + AluJo SINE Alu 1 113 -199 2360 101 24 56 chr17 56218870 56219246 -29219234 + THE1B LTR MaLR 1 364 0 1878 151 0 27 chr17 56219246 56219432 -29219048 + AluJo SINE Alu 113 290 -22 324 241 48 0 chr17 56219447 56219530 -29218950 + MLT1I LTR MaLR 323 409 0 311 219 0 0 chr17 56220868 56220932 -29217548 - MER96 DNA MER1_type? -94 81 18 2177 89 0 7 chr17 56221561 56221843 -29216637 - AluSg SINE Alu -30 280 1 2050 127 7 3 chr17 56222739 56223047 -29215433 - AluSx SINE Alu -3 309 1 328 282 109 23 chr17 56223061 56223235 -29215245 + MLT1K LTR MaLR 382 570 -18 186 238 24 0 chr17 56223585 56223627 -29214853 + L2 LINE L2 3264 3306 -7 564 295 59 56 chr17 56223770 56224126 -29214354 - L1MC4a LINE L1 -1849 5959 5603 306 0 0 0 chr17 56225015 56225049 -29213431 + (CTG)n Simple_repeat Simple_repeat 1 34 0 214 262 0 107 chr17 56225310 56225394 -29213086 - L2 LINE L2 -254 3018 2944 364 288 86 27 chr17 56225394 56225651 -29212829 - L1ME LINE L1 -306 5815 5544 2518 165 16 0 chr17 56226534 56226965 -29211515 - L1MB1 LINE L1 -1 6167 5730 301 264 11 11 chr17 56226973 56227064 -29211416 + MIR SINE MIR 172 262 0 1756 185 20 0 chr17 56227410 56227708 -29210772 - AluJb SINE Alu -8 304 1 2564 123 26 23 chr17 56227826 56228215 -29210265 - MLT1B LTR MaLR 0 390 1 385 244 43 9 chr17 56228734 56228849 -29209631 + MIR3 SINE MIR 81 199 -9 1862 131 0 11 chr17 56228896 56229170 -29209310 + AluSx SINE Alu 1 271 -41 278 327 103 39 chr17 56229494 56229650 -29208830 - MER5A DNA MER1_type 0 189 24 2347 93 0 6 chr17 56229765 56230078 -29208402 + AluSx SINE Alu 1 311 -1 187 294 83 55 chr17 56230711 56230820 -29207660 + MIR SINE MIR 118 229 -33 296 250 97 32 chr17 56231812 56231936 -29206544 + L1ME4a LINE L1 5990 6121 0 533 251 82 43 chr17 56232059 56232510 -29205970 + MLT1J LTR MaLR 3 501 -10 530 296 19 6 chr17 56233176 56233338 -29205142 - L2 LINE L2 -33 3280 3117 199 211 18 0 chr17 56233438 56233495 -29204985 + L2 LINE L2 2460 2517 -797 285 276 219 26 chr17 56233569 56233761 -29204719 + L2 LINE L2 2527 2755 -559 1031 249 165 37 chr17 56233761 56234166 -29204314 + MLT1J LTR MaLR 1 457 -54 451 312 37 6 chr17 56234179 56234423 -29204057 + MLT1J LTR MaLR 164 459 -52 203 365 32 19 chr17 56235160 56235316 -29203164 - MIR SINE MIR -49 213 56 192 192 346 26 chr17 56235431 56235509 -29202971 + MIR SINE MIR 34 136 -72 2369 84 0 7 chr17 56235702 56235999 -29202481 - AluY SINE Alu -14 297 3 489 328 55 77 chr17 56236002 56236298 -29202182 - L2 LINE L2 -7 3265 2979 2281 155 18 65 chr17 56236298 56236744 -29201736 + MSTB LTR MaLR 2 426 0 489 328 55 77 chr17 56236744 56236850 -29201630 - L2 LINE L2 -293 2979 2872 442 290 12 18 chr17 56237009 56237178 -29201302 - L1ME3A LINE L1 -9 6161 5994 625 200 8 0 chr17 56237230 56237355 -29201125 + L1MA10 LINE L1 6198 6323 -11 1313 181 62 18 chr17 56237577 56237853 -29200627 - MER63B DNA MER1_type -146 290 3 277 250 0 50 chr17 56237915 56237995 -29200485 - L1ME3A LINE L1 -262 5908 5833 201 132 0 0 chr17 56238841 56238879 -29199601 + (GA)n Simple_repeat Simple_repeat 1 38 0 1934 136 13 16 chr17 56238992 56239301 -29199179 - AluJb SINE Alu -4 308 1 1494 205 69 60 chr17 56239462 56239910 -29198570 + MLT1C LTR MaLR 11 462 -5 320 318 54 8 chr17 56239915 56240044 -29198436 + MER5A DNA MER1_type 55 189 0 2237 114 0 6 chr17 56240142 56240457 -29198023 + AluSp SINE Alu 1 313 0 232 320 169 14 chr17 56240993 56241212 -29197268 - L2 LINE L2 -14 3258 3006 741 271 44 32 chr17 56241273 56241524 -29196956 - MIR SINE MIR -6 256 3 391 252 47 9 chr17 56241524 56241621 -29196859 + MIR SINE MIR 46 146 -116 1736 153 8 4 chr17 56241809 56242071 -29196409 - AluSx SINE Alu -49 263 1 330 248 108 47 chr17 56242307 56242436 -29196044 + MIR SINE MIR 126 262 0 181 225 12 75 chr17 56242748 56242828 -29195652 + L2 LINE L2 3213 3287 -26 24 0 0 0 chr17 56243932 56243956 -29194524 + AT_rich Low_complexity Low_complexity 1 24 0 1819 22 4 13 chr17 56244276 56244503 -29193977 - L1PA4 LINE L1 -2 6153 5929 345 233 188 45 chr17 56244707 56244883 -29193597 - MIR SINE MIR -11 251 51 484 283 26 31 chr17 56244940 56245131 -29193349 + MIR SINE MIR 16 205 -57 2523 236 58 28 chr17 56246766 56246826 -29191654 + L1ME2 LINE L1 4832 4889 -1275 1910 85 3 123 chr17 56246826 56247168 -29191312 + AluSp SINE Alu 1 301 -2 2523 236 58 28 chr17 56247168 56248218 -29190262 + L1ME2 LINE L1 4889 5960 -204 547 167 117 17 chr17 56248243 56248363 -29190117 + MLT1H LTR MaLR 404 535 -14 27 56 0 0 chr17 56249358 56249394 -29189086 + AT_rich Low_complexity Low_complexity 1 36 0 197 353 111 33 chr17 56249426 56249670 -29188810 + L2 LINE L2 3005 3267 -5 703 183 7 7 chr17 56250708 56250850 -29187630 - MER5B DNA MER1_type -7 171 30 27 102 0 0 chr17 56251022 56251081 -29187399 + GC_rich Low_complexity Low_complexity 1 59 0 24 0 0 0 chr17 56251450 56251474 -29187006 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr17 56251867 56251890 -29186590 + GC_rich Low_complexity Low_complexity 1 23 0 555 284 5 42 chr17 56254412 56254602 -29183878 - MER5A DNA MER1_type 0 189 7 374 252 87 8 chr17 56255744 56255871 -29182609 + MIR SINE MIR 70 206 -56 817 197 61 52 chr17 56256822 56256861 -29181619 - MER20 DNA MER1_type -4 215 178 2378 28 63 3 chr17 56256861 56257147 -29181333 - AluY SINE Alu -8 303 1 817 197 61 52 chr17 56257147 56257320 -29181160 - MER20 DNA MER1_type -41 178 1 1920 104 0 25 chr17 56257718 56258033 -29180447 - AluSx SINE Alu 0 321 14 460 319 11 16 chr17 56259346 56259528 -29178952 + MIR SINE MIR 12 192 -70 777 253 16 43 chr17 56260815 56261068 -29177412 + MIR SINE MIR 2 247 -15 191 262 0 0 chr17 56261036 56261078 -29177402 + L2 LINE L2 3261 3302 -11 * 1775 162 0 19 chr17 56261345 56261654 -29176826 - AluJb SINE Alu -8 304 2 1559 153 4 34 chr17 56262126 56262394 -29176086 + AluJo SINE Alu 33 292 -20 246 300 118 27 chr17 56262792 56263094 -29175386 - L2 LINE L2 -226 3046 2718 314 136 0 17 chr17 56263525 56263584 -29174896 + (TG)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr17 56265446 56265468 -29173012 + AT_rich Low_complexity Low_complexity 1 22 0 674 169 0 32 chr17 56265759 56265883 -29172597 + FLAM_C SINE Alu 1 120 -23 32 49 0 0 chr17 56265883 56265924 -29172556 + AT_rich Low_complexity Low_complexity 1 41 0 379 311 49 0 chr17 56266296 56266418 -29172062 + MIR SINE MIR 105 232 -30 2181 99 3 16 chr17 56267559 56267871 -29170609 + AluSq SINE Alu 1 308 -5 213 302 151 0 chr17 56268362 56268448 -29170032 + MIR SINE MIR 91 189 -73 280 269 65 28 chr17 56268648 56268756 -29169724 + MIR SINE MIR 34 145 -63 320 296 30 30 chr17 56268907 56269039 -29169441 + MIR SINE MIR 21 152 -56 475 179 93 36 chr17 56269631 56269771 -29168709 + MER117 DNA MER1_type 12 159 -38 241 250 14 28 chr17 56274217 56274289 -29164191 + L2 LINE L2 3242 3312 -1 2333 115 0 0 chr17 56274518 56274830 -29163650 - AluSx SINE Alu 0 312 1 1867 135 30 23 chr17 56274863 56275167 -29163313 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 56275416 56275437 -29163043 + AT_rich Low_complexity Low_complexity 1 21 0 559 107 6 12 chr17 56276539 56276639 -29161841 + L1MA4 LINE L1 5545 5646 -523 15506 130 18 8 chr17 56276639 56279033 -29159447 + Tigger1 DNA MER2_type 1 2417 -1 3582 122 49 16 chr17 56279034 56279643 -29158837 + L1MA4 LINE L1 5645 6273 -27 533 257 37 73 chr17 56279896 56280141 -29158339 - MIR SINE MIR -1 261 26 228 226 0 0 chr17 56282647 56282700 -29155780 + MER5B DNA MER1_type 1 53 -125 324 254 280 30 chr17 56282924 56283160 -29155320 - L1MC4a LINE L1 -256 5910 5616 240 200 0 92 chr17 56283172 56283237 -29155243 - L1P4 LINE L1 -588 5573 5515 23 0 0 0 chr17 56283242 56283265 -29155215 + AT_rich Low_complexity Low_complexity 1 23 0 300 296 46 9 chr17 56283269 56283377 -29155103 - MER5B DNA MER1_type -61 117 6 2321 109 0 16 chr17 56284158 56284470 -29154010 - AluSx SINE Alu 0 312 1 927 152 12 43 chr17 56286077 56286241 -29152239 - AluJo SINE Alu -80 232 74 1623 163 10 34 chr17 56286265 56286560 -29151920 - AluJo SINE Alu -9 303 16 512 328 137 11 chr17 56286703 56287164 -29151316 + L2 LINE L2 2040 2558 -756 192 351 72 40 chr17 56287345 56287567 -29150913 + L2 LINE L2 2831 3059 -213 215 196 20 0 chr17 56287741 56287792 -29150688 + L2 LINE L2 3262 3313 0 194 256 167 22 chr17 56288198 56288288 -29150192 - L2 LINE L2 -606 2708 2606 188 280 0 65 chr17 56288356 56288449 -29150031 - MIR3 SINE MIR -7 201 115 513 213 84 41 chr17 56289937 56290150 -29148330 - LTR45B LTR ERV1 0 489 304 221 266 80 44 chr17 56291257 56291370 -29147110 - MIR SINE MIR -96 166 50 228 289 31 75 chr17 56292014 56292173 -29146307 + MIR SINE MIR 20 171 -91 216 300 0 22 chr17 56292420 56292510 -29145970 + MIR SINE MIR 110 197 -65 846 216 7 0 chr17 56292547 56292700 -29145780 + FRAM SINE Alu 2 155 -21 408 88 0 0 chr17 56293010 56293067 -29145413 + (TG)n Simple_repeat Simple_repeat 1 57 0 464 304 12 0 chr17 56293199 56293367 -29145113 + CT-rich Low_complexity Low_complexity 4 173 0 2126 118 16 10 chr17 56293620 56293799 -29144681 - AluSx SINE Alu -6 306 123 180 0 0 0 chr17 56293799 56293819 -29144661 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2126 118 16 10 chr17 56293819 56293943 -29144537 - AluSx SINE Alu -189 123 1 233 169 15 31 chr17 56294006 56294071 -29144409 - L1ME4a LINE L1 0 6121 6058 369 316 105 27 chr17 56294179 56294748 -29143732 - L2 LINE L2 -54 3259 2578 334 286 86 7 chr17 56294827 56294967 -29143513 - MIR SINE MIR -12 250 100 1183 219 96 36 chr17 56295297 56295630 -29142850 - MLT1H LTR MaLR -147 402 50 295 299 64 70 chr17 56296828 56297558 -29140922 + L1ME LINE L1 3866 4591 -1555 248 221 105 0 chr17 56297648 56297743 -29140737 + L1P5 LINE L1 5328 5432 -722 312 15 0 215 chr17 56297750 56297815 -29140665 + AluSq/x SINE Alu 82 132 -171 1372 93 0 39 chr17 56297823 56298027 -29140453 + AluY SINE Alu 110 305 -6 269 253 6 135 chr17 56298083 56298177 -29140303 + L1ME LINE L1 5512 5576 -545 4079 144 17 9 chr17 56298177 56298866 -29139614 - L1PA16 LINE L1 -14 6152 5458 269 253 6 135 chr17 56298866 56298941 -29139539 + L1ME LINE L1 5576 5659 -462 321 26 0 0 chr17 56299861 56299899 -29138581 + (TG)n Simple_repeat Simple_repeat 2 39 0 232 286 75 31 chr17 56303070 56303231 -29135249 - MIR3 SINE MIR -7 201 34 1248 236 0 0 chr17 56303497 56303798 -29134682 - AluY SINE Alu -10 301 1 1128 195 26 0 chr17 56306255 56306450 -29132030 + Tigger3(Golem) DNA MER2_type 1 200 -2829 257 269 81 31 chr17 56306585 56306745 -29131735 - MIR3 SINE MIR -7 201 34 2402 79 0 7 chr17 56307011 56307314 -29131166 - AluY SINE Alu -10 301 1 300 303 21 70 chr17 56307986 56308128 -29130352 - L2 LINE L2 0 3272 3138 23 33 0 0 chr17 56309776 56309806 -29128674 + AT_rich Low_complexity Low_complexity 1 30 0 665 238 94 35 chr17 56310072 56310358 -29128122 - L1ME4a LINE L1 -1988 5820 5518 291 237 26 0 chr17 56311083 56311159 -29127321 + (TG)n Simple_repeat Simple_repeat 2 79 0 357 82 0 0 chr17 56314880 56314929 -29123551 + (TG)n Simple_repeat Simple_repeat 1 49 0 568 278 58 5 chr17 56315273 56315478 -29123002 - MIR SINE MIR 0 262 47 302 199 6 20 chr17 56315584 56315673 -29122807 - MER5A DNA MER1_type -76 113 15 225 0 0 0 chr17 56315829 56315854 -29122626 + (T)n Simple_repeat Simple_repeat 1 25 0 229 245 29 29 chr17 56315925 56316027 -29122453 + MER5B DNA MER1_type 1 102 -76 259 287 156 8 chr17 56316065 56316187 -29122293 + MIR SINE MIR 48 187 -75 2145 107 7 10 chr17 56316552 56316852 -29121628 - AluSc SINE Alu -10 299 1 383 200 94 0 chr17 56317471 56317556 -29120924 - MIR SINE MIR -70 192 100 573 272 32 28 chr17 56317604 56317821 -29120659 + MLT1J2 LTR MaLR 2 222 -228 2598 162 13 34 chr17 56317861 56318330 -29120150 + LTR32 LTR ERVL 13 471 0 230 267 93 0 chr17 56318344 56318419 -29120061 + MLT1I LTR MaLR 311 392 -17 2480 121 11 14 chr17 56318692 56319057 -29119423 - THE1B LTR MaLR 0 364 1 1355 253 73 20 chr17 56319214 56319814 -29118666 - Charlie2 DNA MER1_type 0 2862 2231 789 285 12 88 chr17 56319838 56320178 -29118302 - Charlie2 DNA MER1_type -2445 337 24 216 296 278 17 chr17 56320612 56320788 -29117692 - L2 LINE L2 -457 2857 2636 241 274 38 51 chr17 56320926 56321083 -29117397 + MER5B DNA MER1_type 4 158 -20 188 301 37 56 chr17 56321121 56321258 -29117222 - MIR SINE MIR -62 146 15 420 167 52 138 chr17 56321441 56321615 -29116865 + MER5B DNA MER1_type 2 160 -18 494 279 156 0 chr17 56321633 56321787 -29116693 + MER5A DNA MER1_type 6 183 -6 2041 149 0 3 chr17 56321807 56322115 -29116365 + AluSq SINE Alu 5 311 -2 1270 110 0 0 chr17 56322115 56322278 -29116202 + AluSq SINE Alu 134 296 -17 180 0 0 0 chr17 56322283 56322303 -29116177 + (CAA)n Simple_repeat Simple_repeat 2 21 0 264 111 0 0 chr17 56322526 56322562 -29115918 - MER50-int LTR ERV1 -7163 42 7 1019 115 32 0 chr17 56322562 56322718 -29115762 - MER50 LTR ERV1 -12 722 562 969 79 0 8 chr17 56322719 56322845 -29115635 + AluSp/q SINE Alu 175 299 -14 3469 134 5 36 chr17 56322853 56323442 -29115038 - MER50 LTR ERV1 -163 571 1 184 246 0 101 chr17 56323684 56323753 -29114727 + MIR SINE MIR 17 78 -184 462 218 6 11 chr17 56325721 56325895 -29112585 + CT-rich Low_complexity Low_complexity 2 174 0 239 214 20 20 chr17 56325910 56326008 -29112472 + CT-rich Low_complexity Low_complexity 2 99 0 310 280 8 76 chr17 56326290 56326422 -29112058 - MIR3 SINE MIR -7 201 79 373 223 78 117 chr17 56327660 56327780 -29110700 + MER97c DNA MER1_type? 816 939 -151 1019 153 35 35 chr17 56327780 56327823 -29110657 - L1PA16 LINE L1 -9 6157 6115 2225 110 53 37 chr17 56327823 56328178 -29110302 - THE1B LTR MaLR 0 364 4 1019 153 35 35 chr17 56328178 56328336 -29110144 - L1PA16 LINE L1 -50 6116 5956 373 223 78 117 chr17 56328336 56328497 -29109983 + MER97c DNA MER1_type? 939 1086 -4 837 193 6 55 chr17 56328735 56328916 -29109564 - MER20 DNA MER1_type -2 217 46 193 225 15 31 chr17 56328993 56329060 -29109420 + MIR SINE MIR 86 145 -63 208 259 0 19 chr17 56330402 56330456 -29108024 + CT-rich Low_complexity Low_complexity 1 53 0 1929 138 0 28 chr17 56331306 56331626 -29106854 - AluSx SINE Alu -1 311 1 634 76 0 0 chr17 56331814 56331893 -29106587 - MADE1 DNA Mariner 0 80 2 2439 57 0 14 chr17 56332265 56332561 -29105919 + AluY SINE Alu 1 292 -19 638 281 102 63 chr17 56332760 56333350 -29105130 - L2 LINE L2 -141 3172 2560 1990 151 20 0 chr17 56334250 56334549 -29103931 + AluSx SINE Alu 1 305 -7 325 301 38 30 chr17 56334678 56334811 -29103669 - MIR3 SINE MIR -67 141 8 242 186 12 128 chr17 56335417 56335503 -29102977 - MIR SINE MIR -77 185 110 1867 204 47 40 chr17 56335814 56336266 -29102214 + MLT1C LTR MaLR 6 460 -7 2306 105 0 3 chr17 56336273 56336586 -29101894 + AluSx SINE Alu 1 312 0 310 28 0 0 chr17 56336609 56336645 -29101835 - MADE1 DNA Mariner 0 80 45 321 252 46 80 chr17 56336748 56336899 -29101581 + L2 LINE L2 2950 3095 -177 423 267 87 56 chr17 56337279 56337440 -29101040 + MIR3 SINE MIR 28 193 -15 343 304 7 51 chr17 56338518 56338656 -29099824 - MIR SINE MIR -111 151 20 884 288 29 17 chr17 56338662 56338902 -29099578 - MIR SINE MIR -1 261 19 329 308 33 0 chr17 56339325 56339416 -29099064 - MIR SINE MIR -80 182 89 1258 185 9 5 chr17 56340397 56340648 -29097832 + AluSg/x SINE Alu 65 316 0 339 299 122 14 chr17 56340731 56340945 -29097535 + L3 LINE CR1 745 981 -596 7237 212 46 35 chr17 56340947 56342172 -29096308 + L1M4c LINE L1 16 1252 -5394 1804 163 3 19 chr17 56342172 56342485 -29095995 + AluJo SINE Alu 1 308 -4 7237 212 46 35 chr17 56342485 56343060 -29095420 + L1M4c LINE L1 1252 1820 -4826 899 207 27 70 chr17 56343094 56343350 -29095130 + AluJo SINE Alu 56 300 -12 1693 230 42 61 chr17 56343351 56344204 -29094276 + L1M4c LINE L1 2027 2762 -3884 252 195 0 0 chr17 56344208 56344249 -29094231 - Alu SINE Alu -259 43 3 240 287 143 70 chr17 56344250 56344494 -29093986 + L3 LINE CR1 1213 1474 -103 340 254 42 63 chr17 56344982 56345124 -29093356 + MIR SINE MIR 82 220 -42 215 256 0 0 chr17 56345155 56345198 -29093282 + L2 LINE L2 3262 3304 -9 228 270 22 112 chr17 56345405 56345494 -29092986 + MIR SINE MIR 20 100 -162 217 100 0 0 chr17 56345496 56345526 -29092954 + (TG)n Simple_repeat Simple_repeat 1 30 0 1719 155 7 14 chr17 56346337 56346645 -29091835 + AluSx SINE Alu 1 306 0 396 295 212 37 chr17 56347284 56347501 -29090979 - MIR SINE MIR -1 261 7 2764 282 67 39 chr17 56347551 56348524 -29089956 + L1M4b LINE L1 11 1253 -5606 302 182 26 104 chr17 56348675 56348752 -29089728 + L1M4b LINE L1 1154 1224 -5635 1802 125 3 51 chr17 56348988 56349301 -29089179 + AluSx SINE Alu 11 308 -4 2373 222 97 25 chr17 56349315 56349635 -29088845 + L1M4b LINE L1 1190 1485 -5474 8422 114 9 58 chr17 56349635 56350206 -29088274 - HSMAR2 DNA Mariner -1 1301 704 2097 138 0 10 chr17 56350206 56350518 -29087962 - AluSx SINE Alu -3 309 1 8422 114 9 58 chr17 56350518 56351313 -29087167 - HSMAR2 DNA Mariner -598 704 2 2373 222 97 25 chr17 56351313 56351362 -29087118 + L1M4b LINE L1 1485 1529 -5430 276 30 0 0 chr17 56351362 56351395 -29087085 + (CA)n Simple_repeat Simple_repeat 2 34 0 2373 222 97 25 chr17 56351395 56351953 -29086527 + L1M4b LINE L1 1529 2188 -4771 3389 163 29 16 chr17 56351953 56352573 -29085907 + L1MB8 LINE L1 5545 6172 -6 332 332 123 5 chr17 56352999 56353186 -29085294 - L2 LINE L2 -1013 2301 2093 1390 271 49 28 chr17 56353190 56353663 -29084817 - LTR33 LTR ERVL -10 511 29 270 136 0 0 chr17 56353666 56353710 -29084770 + (CA)n Simple_repeat Simple_repeat 2 45 0 2068 150 16 3 chr17 56353778 56354092 -29084388 - MLT2B2 LTR ERVL -197 318 1 652 319 166 59 chr17 56354104 56354301 -29084179 - L2 LINE L2 -2029 1285 1110 2168 136 0 0 chr17 56354301 56354609 -29083871 + AluSx SINE Alu 1 308 -4 652 319 166 59 chr17 56354609 56355218 -29083262 - L2 LINE L2 -2204 1110 359 1935 180 19 50 chr17 56355218 56355519 -29082961 - MLT1A1 LTR MaLR 0 365 77 1876 159 0 13 chr17 56355519 56355828 -29082652 + AluSg SINE Alu 1 305 -5 1935 180 19 50 chr17 56355828 56355903 -29082577 - MLT1A1 LTR MaLR -288 77 1 652 319 166 59 chr17 56355903 56356049 -29082431 - L2 LINE L2 -2955 359 230 23 68 0 0 chr17 56356915 56356959 -29081521 + AT_rich Low_complexity Low_complexity 1 44 0 318 259 118 37 chr17 56357247 56357382 -29081098 - MIR SINE MIR 0 262 117 597 298 119 34 chr17 56357655 56358007 -29080473 + L2 LINE L2 2130 2511 -803 631 251 23 34 chr17 56358019 56358194 -29080286 + MER5A DNA MER1_type 5 177 -12 284 392 18 12 chr17 56358243 56358414 -29080066 + L2 LINE L2 2586 2757 -557 1141 193 132 15 chr17 56358450 56358776 -29079704 - Charlie5 DNA MER1_type 0 2618 2255 810 145 0 8 chr17 56358777 56358894 -29079586 + FLAM_C SINE Alu 1 116 -17 452 127 14 0 chr17 56358901 56358972 -29079508 + AluJ/FRAM SINE Alu 232 303 -9 453 143 79 103 chr17 56358996 56359058 -29079422 - Charlie5 DNA MER1_type -2497 127 68 1706 63 0 0 chr17 56359058 56359265 -29079215 - L1PA5 LINE L1 0 6154 5948 453 143 79 103 chr17 56359265 56359328 -29079152 - Charlie5 DNA MER1_type -2556 68 5 22 65 0 0 chr17 56359578 56359609 -29078871 + AT_rich Low_complexity Low_complexity 1 31 0 2344 82 0 16 chr17 56359737 56360052 -29078428 + AluY SINE Alu 2 311 0 384 225 14 0 chr17 56360195 56360266 -29078214 + L2 LINE L2 3242 3313 0 340 257 67 19 chr17 56360493 56360598 -29077882 + MIR SINE MIR 37 146 -62 2266 139 11 27 chr17 56361951 56362182 -29076298 + THE1B LTR MaLR 2 235 -129 2551 102 19 43 chr17 56362182 56362360 -29076120 + THE1B LTR MaLR 1 182 -182 2528 64 0 0 chr17 56362360 56362655 -29075825 + AluY SINE Alu 1 295 -16 2551 102 19 43 chr17 56362655 56362849 -29075631 + THE1B LTR MaLR 182 364 0 12537 94 5 1 chr17 56362849 56364422 -29074058 + THE1B-int LTR MaLR 1 1580 0 2593 111 25 14 chr17 56364422 56364782 -29073698 + THE1B LTR MaLR 1 364 0 2266 139 11 27 chr17 56364782 56364916 -29073564 + THE1B LTR MaLR 232 363 -1 2122 114 16 10 chr17 56364916 56365223 -29073257 + AluSg1 SINE Alu 1 309 0 248 265 68 51 chr17 56365617 56365734 -29072746 - MIR SINE MIR -64 144 26 3153 141 134 112 chr17 56365783 56365978 -29072502 + L1MC3 LINE L1 6898 7087 -698 291 284 0 0 chr17 56365978 56366052 -29072428 + MLT1F1 LTR MaLR 35 108 -459 3153 141 134 112 chr17 56366052 56366281 -29072199 + L1MC3 LINE L1 7087 7309 -476 2508 107 36 33 chr17 56366281 56366644 -29071836 - THE1B LTR MaLR 0 364 1 3153 141 134 112 chr17 56366644 56367005 -29071475 + L1MC3 LINE L1 7309 7776 -9 1732 179 17 0 chr17 56367009 56367310 -29071170 + AluJo SINE Alu 1 306 -6 1098 204 0 0 chr17 56367312 56367484 -29070996 + FAM SINE Alu 1 172 -3 21 0 0 0 chr17 56367484 56367505 -29070975 + AT_rich Low_complexity Low_complexity 1 21 0 260 294 179 15 chr17 56367864 56368032 -29070448 + MIR SINE MIR 6 208 -54 503 306 70 25 chr17 56368325 56368567 -29069913 - MLT1L LTR MaLR 0 615 363 304 277 44 78 chr17 56368647 56368853 -29069627 + L2 LINE L2 3050 3248 -65 1826 139 0 31 chr17 56369029 56369323 -29069157 + AluJo SINE Alu 11 295 -17 242 322 103 40 chr17 56369723 56369897 -29068583 - MIR SINE MIR -65 197 13 274 293 26 26 chr17 56370417 56370533 -29067947 + MIR SINE MIR 44 159 -103 333 370 104 24 chr17 56371272 56371521 -29066959 - L2 LINE L2 0 3272 3004 1046 117 11 53 chr17 56371530 56371899 -29066581 - AluSg/x SINE Alu 0 310 131 603 316 132 58 chr17 56371929 56372594 -29065886 - L2 LINE L2 -339 2975 2214 1054 185 0 0 chr17 56372594 56372751 -29065729 + FRAM SINE Alu 1 157 -9 603 316 132 58 chr17 56372751 56373058 -29065422 - L2 LINE L2 -1100 2214 1931 309 267 111 15 chr17 56373270 56373405 -29065075 - MIR SINE MIR -17 245 98 2601 58 0 3 chr17 56373624 56373936 -29064544 - AluY SINE Alu 0 311 1 2666 198 43 71 chr17 56374083 56374802 -29063678 + LTR34 LTR ERV1 1 699 0 1005 267 101 42 chr17 56375036 56375087 -29063393 + L2 LINE L2 2783 2830 -483 1738 187 155 17 chr17 56375087 56375494 -29062986 - MER31B LTR ERV1 -3 463 1 1005 267 101 42 chr17 56375494 56375939 -29062541 + L2 LINE L2 2830 3288 -25 2261 116 0 0 chr17 56376038 56376341 -29062139 + AluSg SINE Alu 1 303 -7 2995 107 34 0 chr17 56376547 56376960 -29061520 + MSTA LTR MaLR 1 427 -1 197 304 13 25 chr17 56377033 56377112 -29061368 + MIR SINE MIR 185 262 0 256 294 141 93 chr17 56377153 56377466 -29061014 + L2 LINE L2 2914 3241 -31 350 247 0 35 chr17 56378008 56378093 -29060387 + L2 LINE L2 3229 3310 -3 2157 121 10 0 chr17 56378426 56378732 -29059748 + AluSx SINE Alu 1 309 -3 272 311 85 23 chr17 56379001 56379178 -29059302 - MIR SINE MIR -13 249 62 648 220 130 10 chr17 56379989 56380189 -29058291 + MIR SINE MIR 39 262 0 302 249 95 84 chr17 56380202 56380383 -29058097 + L1ME4a LINE L1 5661 5847 -274 2350 92 0 13 chr17 56380383 56380688 -29057792 - AluSg SINE Alu -9 301 1 302 249 95 84 chr17 56380688 56380779 -29057701 + L1ME4a LINE L1 5847 5936 -185 28 48 0 0 chr17 56380882 56380924 -29057556 + AT_rich Low_complexity Low_complexity 1 42 0 427 289 114 68 chr17 56381367 56382404 -29056076 - L2 LINE L2 -5 3267 2182 24 0 0 0 chr17 56383146 56383170 -29055310 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 56384240 56384261 -29054219 + AT_rich Low_complexity Low_complexity 1 21 0 357 256 11 0 chr17 56386360 56386450 -29052030 - MIR3 SINE MIR -46 162 72 566 124 67 0 chr17 56386646 56386751 -29051729 - MIR SINE MIR -28 234 123 1058 206 35 112 chr17 56386751 56387041 -29051439 - L1MEc LINE L1 -4080 2316 2072 2364 85 3 3 chr17 56387041 56387336 -29051144 - AluSg SINE Alu -15 295 1 1058 206 35 112 chr17 56387336 56387501 -29050979 - L1MEc LINE L1 -4324 2072 1896 1798 112 4 0 chr17 56387581 56387842 -29050638 - AluSx SINE Alu 0 302 41 1919 109 6 68 chr17 56387904 56388261 -29050219 - AluSq SINE Alu 0 313 3 871 318 90 58 chr17 56388264 56389756 -29048724 - L1MEc LINE L1 -4817 1579 40 256 295 58 29 chr17 56389945 56390084 -29048396 + L2 LINE L2 2897 3039 -233 2109 134 3 3 chr17 56390683 56390988 -29047492 + AluSx SINE Alu 1 305 -7 1006 151 38 0 chr17 56391580 56391739 -29046741 - AluJb SINE Alu -14 298 134 2478 58 13 13 chr17 56392210 56392521 -29045959 + AluY SINE Alu 1 311 0 200 345 60 17 chr17 56392855 56392971 -29045509 + L2 LINE L2 3149 3269 -3 2360 101 0 0 chr17 56394474 56394770 -29043710 + AluSx SINE Alu 1 296 -16 2262 113 0 0 chr17 56395184 56395484 -29042996 + AluSx SINE Alu 4 303 -9 2296 104 0 22 chr17 56395487 56395805 -29042675 + AluSp SINE Alu 1 311 -2 32 57 0 0 chr17 56395940 56395993 -29042487 + AT_rich Low_complexity Low_complexity 1 53 0 2079 142 3 0 chr17 56396514 56396816 -29041664 + AluSx SINE Alu 1 303 -9 1001 117 7 52 chr17 56396816 56396997 -29041483 + AluSg/x SINE Alu 137 310 0 882 126 7 42 chr17 56397000 56397143 -29041337 + AluSq/x SINE Alu 1 138 -175 1561 173 7 40 chr17 56397145 56397446 -29041034 + AluSx SINE Alu 6 296 -16 1969 92 0 0 chr17 56397448 56397688 -29040792 + AluSx SINE Alu 1 240 -72 450 0 0 0 chr17 56397701 56397751 -29040729 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2061 139 0 0 chr17 56399122 56399416 -29039064 + AluSx SINE Alu 3 296 -16 314 122 0 0 chr17 56399416 56399465 -29039015 + L1MA3 LINE L1 6257 6305 0 276 259 66 60 chr17 56399599 56399765 -29038715 - MER5B DNA MER1_type 0 178 12 369 273 58 8 chr17 56399856 56399977 -29038503 + MIR SINE MIR 107 233 -29 514 263 76 13 chr17 56400465 56400642 -29037838 + MIR3 SINE MIR 15 201 -7 393 332 75 10 chr17 56401130 56401329 -29037151 - MIR SINE MIR -46 216 5 1756 188 0 0 chr17 56402196 56402484 -29035996 + AluJo SINE Alu 1 288 -24 279 122 0 0 chr17 56403850 56403899 -29034581 + (CA)n Simple_repeat Simple_repeat 2 50 0 387 0 0 0 chr17 56404958 56405001 -29033479 + (CA)n Simple_repeat Simple_repeat 1 43 0 21 0 0 0 chr17 56406325 56406346 -29032134 + AT_rich Low_complexity Low_complexity 1 21 0 857 99 9 0 chr17 56407658 56407769 -29030711 + AluSx SINE Alu 60 171 -141 662 298 118 30 chr17 56407799 56407910 -29030570 + L2 LINE L2 2597 2697 -616 1768 164 10 35 chr17 56407910 56408222 -29030258 + AluJo SINE Alu 1 304 -8 662 298 118 30 chr17 56408222 56408772 -29029708 + L2 LINE L2 2697 3309 -4 504 244 91 30 chr17 56409435 56409663 -29028817 + MIR SINE MIR 25 262 0 22 0 0 0 chr17 56412144 56412166 -29026314 + GC_rich Low_complexity Low_complexity 1 22 0 222 217 58 14 chr17 56412218 56412287 -29026193 + (CCGGG)n Simple_repeat Simple_repeat 4 75 0 242 167 12 60 chr17 56412321 56412405 -29026075 + C-rich Low_complexity Low_complexity 5 84 0 213 194 48 0 chr17 56412710 56412772 -29025708 + (TTCA)n Simple_repeat Simple_repeat 3 67 0 28 0 0 0 chr17 56412946 56412974 -29025506 + AT_rich Low_complexity Low_complexity 1 28 0 2218 106 0 0 chr17 56413080 56413362 -29025118 + AluSx SINE Alu 1 282 -30 242 255 96 32 chr17 56413644 56413738 -29024742 - MIR SINE MIR -74 188 89 646 162 125 15 chr17 56414061 56414197 -29024283 + L1MC1 LINE L1 6178 6328 -5 1076 216 0 14 chr17 56414213 56414426 -29024054 + AluJo SINE Alu 1 210 -102 1855 163 13 43 chr17 56414475 56414849 -29023631 + L1MB8 LINE L1 5816 6178 0 183 293 0 61 chr17 56414910 56414992 -29023488 + L2 LINE L2 3228 3304 -9 2499 67 0 6 chr17 56416545 56416858 -29021622 - AluY SINE Alu 0 311 1 1371 87 0 0 chr17 56416972 56417155 -29021325 - L1PA8 LINE L1 0 6172 5990 458 301 115 14 chr17 56417158 56417367 -29021113 - MIR SINE MIR -13 249 20 1284 160 5 0 chr17 56418259 56418447 -29020033 + MER1B DNA MER1_type 1 189 -108 * 1473 117 9 24 chr17 56418440 56418653 -29019827 + MER1B DNA MER1_type 130 339 0 280 286 44 0 chr17 56418853 56418944 -29019536 + MLT1J LTR MaLR 403 497 -14 2183 123 0 7 chr17 56418998 56419307 -29019173 + AluSq SINE Alu 1 307 -6 2485 83 0 6 chr17 56419428 56419741 -29018739 - AluY SINE Alu 0 311 1 1882 167 0 3 chr17 56420228 56420521 -29017959 + AluJb SINE Alu 6 297 -15 2337 56 0 14 chr17 56420624 56420938 -29017542 + AluY SINE Alu 1 310 0 3260 189 21 14 chr17 56421046 56421702 -29016778 + MER67B LTR ERV1 1 661 0 263 231 62 0 chr17 56421746 56421811 -29016669 - MIR SINE MIR -110 152 84 279 299 35 0 chr17 56421831 56421918 -29016562 - MIR3 SINE MIR 0 208 119 605 145 152 21 chr17 56421979 56422124 -29016356 + MER53 DNA DNA 1 164 -25 805 169 0 0 chr17 56422124 56422248 -29016232 + AluJ SINE Alu 1 124 -188 627 85 15 39 chr17 56422250 56422380 -29016100 + (GGGGA)n Simple_repeat Simple_repeat 4 130 0 564 42 0 0 chr17 56422481 56422552 -29015928 + (GGGAA)n Simple_repeat Simple_repeat 5 75 0 1060 139 78 0 chr17 56422552 56422718 -29015762 + AluJ SINE Alu 134 312 0 180 182 0 0 chr17 56422718 56422762 -29015718 + (TA)n Simple_repeat Simple_repeat 1 44 0 1348 128 95 11 chr17 56423027 56423441 -29015039 - LTR54 LTR ERV1 0 510 1 206 339 34 42 chr17 56424116 56424234 -29014246 - MIR SINE MIR -63 145 29 446 231 152 99 chr17 56424660 56424770 -29013710 + MIR SINE MIR 7 110 -152 2210 132 0 0 chr17 56424770 56425081 -29013399 + AluSx SINE Alu 1 311 -1 446 231 152 99 chr17 56425081 56425213 -29013267 + MIR SINE MIR 110 262 0 2396 71 0 7 chr17 56426253 56426548 -29011932 + AluY SINE Alu 9 301 -10 458 266 121 6 chr17 56426707 56426880 -29011600 - MIR SINE MIR -25 237 45 244 200 50 0 chr17 56427278 56427338 -29011142 - L3 LINE CR1 -2 1575 1513 367 310 21 14 chr17 56427726 56427871 -29010609 - L3 LINE CR1 -93 1484 1339 526 208 5 158 chr17 56428369 56428428 -29010052 + MER5B DNA MER1_type 7 73 -105 6153 55 1 0 chr17 56428428 56429169 -29009311 + L1PA6 LINE L1 5412 6153 -1 526 208 5 158 chr17 56429169 56429212 -29009268 + MER5B DNA MER1_type 73 121 -57 2397 92 3 0 chr17 56429212 56429517 -29008963 + AluY SINE Alu 1 306 -5 526 208 5 158 chr17 56429517 56429615 -29008865 + MER5B DNA MER1_type 121 177 -1 383 247 75 0 chr17 56429638 56429731 -29008749 + MER5A DNA MER1_type 10 109 -80 1059 211 5 0 chr17 56429808 56429993 -29008487 + MER58A DNA MER1_type 1 186 -38 1054 236 63 11 chr17 56429993 56430264 -29008216 + MER34 LTR ERV1 1 285 -257 2542 60 0 22 chr17 56430318 56430636 -29007844 - AluY SINE Alu 0 311 1 679 229 36 0 chr17 56430647 56430787 -29007693 + MER34 LTR ERV1 393 537 -5 289 111 44 0 chr17 56430788 56430833 -29007647 + MER58A DNA MER1_type 178 224 0 387 0 0 0 chr17 56431316 56431359 -29007121 + (TTTTG)n Simple_repeat Simple_repeat 5 47 0 2156 114 0 0 chr17 56431359 56431639 -29006841 - AluSx SINE Alu -32 280 1 353 286 102 7 chr17 56431888 56432035 -29006445 - MER5A DNA MER1_type 0 189 29 1140 215 9 5 chr17 56432065 56432279 -29006201 + MER58A DNA MER1_type 1 215 -9 245 262 70 76 chr17 56432281 56432453 -29006027 + MER5A DNA MER1_type 1 171 -18 758 90 18 9 chr17 56432540 56432651 -29005829 - FRAM SINE Alu -6 170 59 31 0 0 0 chr17 56432661 56432692 -29005788 + AT_rich Low_complexity Low_complexity 1 31 0 401 60 0 0 chr17 56432693 56432743 -29005737 - MER66B LTR ERV1 -142 344 295 1140 224 43 83 chr17 56432915 56433313 -29005167 - LTR16A LTR ERVL -50 400 19 502 283 25 6 chr17 56433391 56433550 -29004930 - MIR SINE MIR -70 192 31 482 255 50 7 chr17 56433642 56433783 -29004697 + MER103 DNA DNA 10 156 -10 337 182 29 17 chr17 56434681 56434700 -29003780 - MER51A LTR ERV1 -562 78 61 4544 108 8 6 chr17 56434700 56435339 -29003141 - MER51C LTR ERV1 0 640 1 337 182 29 17 chr17 56435339 56435414 -29003066 - MER51A LTR ERV1 -579 61 1 207 317 108 8 chr17 56435950 56436070 -29002410 - MIR3 SINE MIR -11 197 66 2267 113 3 3 chr17 56436421 56436722 -29001758 + AluSx SINE Alu 1 301 -11 432 228 148 19 chr17 56436829 56436991 -29001489 + MIR SINE MIR 80 262 0 290 293 155 28 chr17 56437738 56437816 -29000664 + MIR SINE MIR 49 116 -146 2760 129 8 42 chr17 56437816 56437864 -29000616 - L1MB4 LINE L1 -2 6178 6130 2535 54 0 3 chr17 56437864 56438162 -29000318 - AluY SINE Alu -14 297 1 2760 129 8 42 chr17 56438162 56438593 -28999887 - L1MB4 LINE L1 -50 6130 5715 290 293 155 28 chr17 56438593 56438695 -28999785 + MIR SINE MIR 116 252 -10 183 162 0 27 chr17 56438663 56438700 -28999780 + L2 LINE L2 3225 3260 -12 * 2407 56 0 3 chr17 56438719 56439046 -28999434 - AluY SINE Alu 0 326 1 204 321 69 50 chr17 56439612 56439771 -28998709 - MIR3 SINE MIR -14 194 33 1915 152 0 7 chr17 56439873 56440170 -28998310 - AluSx SINE Alu -17 295 1 1149 230 118 57 chr17 56440384 56440858 -28997622 + MLT1D LTR MaLR 1 503 -2 333 275 44 75 chr17 56440992 56441152 -28997328 - MIR3 SINE MIR -43 165 11 2384 92 0 0 chr17 56441365 56441658 -28996822 - AluSg SINE Alu -17 293 1 490 313 71 37 chr17 56441659 56442154 -28996326 + L2 LINE L2 2744 3272 0 1742 160 19 29 chr17 56442296 56442603 -28995877 + AluJo SINE Alu 9 312 0 1465 184 3 28 chr17 56443500 56443772 -28994708 + AluJo SINE Alu 1 267 -45 255 61 0 0 chr17 56443772 56443805 -28994675 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 697 196 31 6 chr17 56444019 56444182 -28994298 - L1ME3A LINE L1 0 6170 6004 278 156 0 0 chr17 56444191 56444236 -28994244 - L1ME3A LINE L1 -378 5792 5748 968 294 24 6 chr17 56445295 56445635 -28992845 - L1ME4a LINE L1 -256 5865 5520 1773 174 3 10 chr17 56445981 56446307 -28992173 + AluJb SINE Alu 1 312 0 2273 117 7 0 chr17 56446310 56446619 -28991861 + AluSq SINE Alu 2 312 -1 371 259 0 52 chr17 56446805 56446921 -28991559 + MIR3 SINE MIR 94 203 -5 2155 124 0 16 chr17 56447641 56447947 -28990533 + AluSc SINE Alu 1 301 -8 2360 94 7 0 chr17 56447990 56448298 -28990182 - AluSq SINE Alu -3 310 1 22 0 0 0 chr17 56448303 56448325 -28990155 + AT_rich Low_complexity Low_complexity 1 22 0 3392 126 62 103 chr17 56448878 56449687 -28988793 + LTR1 LTR ERV1 10 785 0 1572 179 30 7 chr17 56450192 56450489 -28987991 + AluJo SINE Alu 1 304 -8 2225 119 0 3 chr17 56450621 56450932 -28987548 + AluSg SINE Alu 1 310 0 2399 69 3 7 chr17 56451049 56451353 -28987127 + AluY SINE Alu 1 303 -8 993 180 46 0 chr17 56451782 56451976 -28986504 + L1ME1 LINE L1 5810 6012 -154 779 152 0 23 chr17 56451976 56452108 -28986372 + FRAM SINE Alu 48 176 0 223 71 89 36 chr17 56452738 56452794 -28985686 + MIR SINE MIR 97 155 -107 1709 185 18 0 chr17 56452803 56453111 -28985369 + AluJo SINE Alu 2 314 0 1243 133 82 9 chr17 56453579 56453745 -28984735 - Tigger7 DNA MER2_type -9 2578 2389 1614 166 25 14 chr17 56453745 56454028 -28984452 + AluJo SINE Alu 1 286 -26 1243 133 82 9 chr17 56454028 56454094 -28984386 - Tigger7 DNA MER2_type -198 2389 2329 1899 155 3 0 chr17 56454326 56454617 -28983863 + AluSx SINE Alu 20 311 -1 277 271 103 89 chr17 56454821 56455024 -28983456 + L3 LINE CR1 597 802 -775 516 307 102 23 chr17 56455408 56455672 -28982808 + L3 LINE CR1 862 1146 -431 585 271 51 0 chr17 56455680 56455857 -28982623 + MIR SINE MIR 1 186 -76 564 312 19 68 chr17 56455882 56456247 -28982233 + L3 LINE CR1 1184 1530 -47 2405 96 3 10 chr17 56456466 56456780 -28981700 + AluSq SINE Alu 1 312 -1 2418 71 0 0 chr17 56457874 56458169 -28980311 - AluY SINE Alu -16 295 1 1869 141 131 17 chr17 56458246 56458650 -28979830 + LTR7 LTR ERV1 1 450 0 1636 192 113 15 chr17 56458650 56459056 -28979424 + HERVH LTR ERV1 1 446 -7267 16145 188 8 34 chr17 56459144 56460171 -28978309 + HERVH LTR ERV1 801 1854 -5859 2081 132 0 16 chr17 56460171 56460475 -28978005 + AluSg SINE Alu 1 299 -11 16145 188 8 34 chr17 56460475 56462727 -28975753 + HERVH LTR ERV1 1854 3993 -3720 4901 228 18 34 chr17 56462759 56463064 -28975416 + HERVH LTR ERV1 3995 4304 -2787 2318 88 13 0 chr17 56463064 56463370 -28975110 + AluSg SINE Alu 1 310 0 4901 228 18 34 chr17 56463370 56464265 -28974215 + HERVH LTR ERV1 4304 5147 -1944 1702 186 113 33 chr17 56464282 56464707 -28973773 + LTR2B LTR ERV1 32 490 0 6654 73 9 1 chr17 56464707 56465554 -28972926 + Harlequin LTR ERV1 1 854 -6042 2572 164 11 0 chr17 56465572 56466022 -28972458 + HERVH LTR ERV1 5589 6043 -1670 * 3807 107 7 12 chr17 56465992 56466552 -28971928 + HERVH LTR ERV1 7157 7713 0 2322 143 51 14 chr17 56466552 56466986 -28971494 + LTR7 LTR ERV1 1 450 0 2102 124 10 3 chr17 56467041 56467340 -28971140 - AluSx SINE Alu -11 301 1 280 143 0 0 chr17 56467467 56467509 -28970971 - MLT1C LTR MaLR -4 463 422 951 176 13 0 chr17 56467522 56467681 -28970799 + FRAM SINE Alu 16 176 0 1579 208 40 47 chr17 56467682 56468110 -28970370 - MLT1C LTR MaLR -42 425 1 660 230 19 6 chr17 56468110 56468271 -28970209 + MIR SINE MIR 35 197 -65 239 321 0 0 chr17 56468380 56468436 -28970044 - LTR67 LTR ERVL -401 156 101 1022 199 70 5 chr17 56468470 56468656 -28969824 + AluJb SINE Alu 85 282 -30 1921 155 14 0 chr17 56468712 56469003 -28969477 - AluJb SINE Alu -17 295 1 2080 122 4 0 chr17 56469782 56470091 -28968389 + AluSx SINE Alu 7 316 0 323 330 93 10 chr17 56470104 56470298 -28968182 + MIR SINE MIR 3 212 -50 182 340 43 32 chr17 56470898 56470992 -28967488 - MER5A DNA MER1_type -56 133 39 * 253 234 45 28 chr17 56470916 56471000 -28967480 + MER5A DNA MER1_type 85 162 -16 492 116 0 0 chr17 56471514 56471600 -28966880 + (TC)n Simple_repeat Simple_repeat 1 86 0 21 0 0 0 chr17 56471864 56471885 -28966595 + AT_rich Low_complexity Low_complexity 1 21 0 1780 180 0 10 chr17 56472181 56472470 -28966010 - AluJb SINE Alu -26 286 1 267 303 0 40 chr17 56473024 56473123 -28965357 + L2 LINE L2 3176 3270 -2 241 307 45 0 chr17 56473537 56473625 -28964855 - MIR SINE MIR -111 151 60 2075 149 70 75 chr17 56473816 56474130 -28964350 + MLT2D LTR ERVL 1 314 -100 1556 144 96 15 chr17 56474130 56474401 -28964079 - AluSx SINE Alu -19 293 1 2075 149 70 75 chr17 56474401 56474502 -28963978 + MLT2D LTR ERVL 314 414 0 393 238 93 13 chr17 56474779 56474930 -28963550 + L1MC4 LINE L1 7094 7256 -786 300 299 23 0 chr17 56475191 56475278 -28963202 + MER94 DNA DNA 42 130 -4 419 268 160 39 chr17 56475286 56475749 -28962731 + L1MC5 LINE L1 7421 7939 -22 1635 185 10 20 chr17 56475759 56476061 -28962419 - AluJo SINE Alu -12 300 2 567 277 83 33 chr17 56476153 56476395 -28962085 - MIR SINE MIR -2 260 7 2171 109 3 16 chr17 56476497 56476810 -28961670 - AluSc SINE Alu 0 309 1 302 235 94 0 chr17 56477034 56477119 -28961361 - MER5A DNA MER1_type -93 96 4 278 369 60 0 chr17 56477401 56477550 -28960930 - L2 LINE L2 0 3272 3115 2086 61 0 4 chr17 56477572 56477835 -28960645 + L1PA6 LINE L1 5890 6151 -3 619 289 103 24 chr17 56478960 56479369 -28959111 - L1ME4a LINE L1 -168 5953 5513 297 0 0 0 chr17 56479371 56479404 -28959076 + (CAT)n Simple_repeat Simple_repeat 1 33 0 339 289 52 7 chr17 56479406 56479541 -28958939 - MIR SINE MIR -8 254 114 2077 128 9 37 chr17 56479569 56479850 -28958630 + AluSx SINE Alu 1 273 -39 216 0 0 0 chr17 56479850 56479874 -28958606 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2077 128 9 37 chr17 56479874 56479913 -28958567 + AluSx SINE Alu 273 312 0 436 248 51 51 chr17 56480040 56480197 -28958283 - L1MC4a LINE L1 -1886 5922 5766 2050 112 13 26 chr17 56480324 56480628 -28957852 - AluY SINE Alu -11 300 1 191 349 116 0 chr17 56480734 56480880 -28957600 + MIR3 SINE MIR 43 205 -3 582 200 181 14 chr17 56481228 56481438 -28957042 + L1ME4a LINE L1 5874 6118 -3 1825 155 44 20 chr17 56481446 56481743 -28956737 + AluJb SINE Alu 1 304 -8 498 279 75 53 chr17 56481938 56482203 -28956277 + MLT1J LTR MaLR 24 294 -217 2250 104 0 7 chr17 56482351 56482660 -28955820 + AluY SINE Alu 1 307 -4 2202 92 3 55 chr17 56482705 56483031 -28955449 - AluSc SINE Alu 0 309 1 2099 140 3 0 chr17 56484001 56484308 -28954172 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr17 56484867 56484888 -28953592 + AT_rich Low_complexity Low_complexity 1 21 0 279 275 18 36 chr17 56485068 56485155 -28953325 + (TATATG)n Simple_repeat Simple_repeat 2 86 -79 180 77 0 0 chr17 56485155 56485181 -28953299 + (CA)n Simple_repeat Simple_repeat 2 27 0 279 275 18 36 chr17 56485181 56485260 -28953220 + (TATATG)n Simple_repeat Simple_repeat 86 165 0 222 91 0 0 chr17 56485269 56485302 -28953178 + (CA)n Simple_repeat Simple_repeat 2 34 0 209 266 85 21 chr17 56485386 56485480 -28953000 + MIR SINE MIR 121 220 -42 341 278 26 26 chr17 56485497 56485612 -28952868 + L2 LINE L2 3199 3313 0 1297 155 52 69 chr17 56485981 56486271 -28952209 + AluJo SINE Alu 1 285 -27 198 290 21 32 chr17 56486298 56486391 -28952089 + L3b LINE CR1 1313 1404 -179 2270 87 3 3 chr17 56487727 56488038 -28950442 - AluSp SINE Alu 0 311 1 856 159 0 0 chr17 56488062 56488194 -28950286 + FLAM_A SINE Alu 10 141 -1 1907 186 130 2 chr17 56488394 56488808 -28949672 - MLT1C LTR MaLR 0 467 1 412 152 0 0 chr17 56489057 56489123 -28949357 - FLAM SINE Alu -14 129 64 2135 132 3 3 chr17 56489190 56489500 -28948980 + AluSx SINE Alu 1 310 -2 351 303 108 22 chr17 56489852 56490037 -28948443 + MIR SINE MIR 49 249 -13 209 222 0 0 chr17 56490479 56490524 -28947956 + T-rich Low_complexity Low_complexity 1 45 0 1786 179 0 14 chr17 56490601 56490898 -28947582 - AluJo SINE Alu -19 293 1 25 31 0 0 chr17 56491170 56491202 -28947278 + AT_rich Low_complexity Low_complexity 1 32 0 887 119 31 19 chr17 56491227 56492038 -28946442 + (TTATA)n Simple_repeat Simple_repeat 1 997 0 33 25 0 0 chr17 56492113 56492153 -28946327 + AT_rich Low_complexity Low_complexity 1 40 0 41094 29 22 1 chr17 56492190 56498215 -28940265 + L1PA2 LINE L1 2 6155 0 371 113 14 0 chr17 56498872 56498943 -28939537 + (TA)n Simple_repeat Simple_repeat 2 73 0 2382 100 0 0 chr17 56499114 56499424 -28939056 + AluSq SINE Alu 1 310 -3 225 118 0 137 chr17 56499937 56499988 -28938492 - L2 LINE L2 -7 3306 3263 490 217 199 31 chr17 56500506 56500667 -28937813 - MIR SINE MIR -29 233 46 1655 184 40 7 chr17 56500796 56501095 -28937385 + AluJo SINE Alu 1 309 -3 213 175 0 0 chr17 56501161 56501201 -28937279 + (CA)n Simple_repeat Simple_repeat 1 40 0 204 40 0 0 chr17 56502048 56502073 -28936407 + (GA)n Simple_repeat Simple_repeat 2 26 0 729 318 87 49 chr17 56502371 56503016 -28935464 - L2 LINE L2 0 3272 2609 676 192 158 0 chr17 56503080 56503226 -28935254 + MER45A DNA AcHobo 10 178 0 399 358 20 7 chr17 56503568 56503716 -28934764 + MER5B DNA MER1_type 26 175 -3 222 250 16 31 chr17 56504811 56504875 -28933605 - L2 LINE L2 0 3313 3251 306 328 49 16 chr17 56505446 56505568 -28932912 - MIR SINE MIR -64 144 19 180 0 0 0 chr17 56505568 56505588 -28932892 + (T)n Simple_repeat Simple_repeat 1 20 0 1739 213 52 18 chr17 56505887 56506334 -28932146 + MLT1C LTR MaLR 6 467 0 2343 95 7 3 chr17 56507028 56507333 -28931147 - AluSx SINE Alu -6 306 1 1974 122 0 40 chr17 56507742 56508038 -28930442 + AluSx SINE Alu 1 284 -28 2057 317 120 50 chr17 56508109 56508512 -28929968 - L2 LINE L2 -874 2440 2067 1774 202 57 34 chr17 56508512 56508899 -28929581 - MSTD LTR MaLR 0 396 1 2057 317 120 50 chr17 56508899 56510373 -28928107 - L2 LINE L2 -1247 2067 431 909 238 78 58 chr17 56510373 56510755 -28927725 - MLT1D LTR MaLR 0 505 116 2829 174 23 4 chr17 56510765 56511277 -28927203 - Tigger7 DNA MER2_type -1965 522 1 1801 130 27 34 chr17 56511325 56511617 -28926863 + AluSx SINE Alu 4 293 -19 1235 293 59 49 chr17 56512243 56512824 -28925656 + L2 LINE L2 2489 3079 -234 2226 154 22 0 chr17 56512824 56513180 -28925300 - THE1B LTR MaLR 0 364 1 1235 293 59 49 chr17 56513180 56513416 -28925064 + L2 LINE L2 3079 3311 -2 1436 201 44 41 chr17 56513524 56513723 -28924757 + MLT1B LTR MaLR 1 203 -187 2418 87 0 3 chr17 56513723 56514022 -28924458 + AluSc SINE Alu 1 298 -11 1436 201 44 41 chr17 56514022 56514211 -28924269 + MLT1B LTR MaLR 203 390 0 4852 129 7 0 chr17 56514392 56515137 -28923343 - L1PA14 LINE L1 0 6161 5412 878 250 53 8 chr17 56515346 56515590 -28922890 - MIR SINE MIR -4 258 4 195 42 0 0 chr17 56515786 56515810 -28922670 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 2051 130 0 0 chr17 56516141 56516426 -28922054 - AluSx SINE Alu -22 290 6 452 286 6 56 chr17 56516534 56516599 -28921881 - MIR SINE MIR -40 222 155 1993 104 0 50 chr17 56516599 56516932 -28921548 - AluSx SINE Alu 0 318 1 452 286 6 56 chr17 56516932 56517030 -28921450 - MIR SINE MIR -107 155 68 182 293 61 12 chr17 56517869 56517951 -28920529 - MIR3 SINE MIR -6 202 117 189 323 15 31 chr17 56518654 56518719 -28919761 + L2 LINE L2 3198 3261 -11 890 177 0 0 chr17 56518837 56518984 -28919496 - FRAM SINE Alu -24 152 6 2158 121 10 3 chr17 56519013 56519319 -28919161 - AluSq SINE Alu 0 313 6 350 253 74 11 chr17 56519408 56519503 -28918977 + MIR3 SINE MIR 6 106 -102 894 172 7 0 chr17 56519814 56519959 -28918521 + AluJb SINE Alu 1 146 -166 1654 178 16 3 chr17 56519959 56520083 -28918397 + AluSc SINE Alu 1 122 -187 279 0 0 0 chr17 56520083 56520114 -28918366 + (CA)n Simple_repeat Simple_repeat 2 32 0 1654 178 16 3 chr17 56520114 56520293 -28918187 + AluSc SINE Alu 122 308 -1 2266 93 0 0 chr17 56520976 56521265 -28917215 + AluSg SINE Alu 1 289 -21 332 357 121 18 chr17 56521746 56522026 -28916454 + L2 LINE L2 2963 3271 -1 498 266 84 0 chr17 56523597 56523751 -28914729 - MIR SINE MIR -4 258 92 2080 107 30 46 chr17 56524945 56525311 -28913169 - THE1B LTR MaLR -2 362 3 515 321 13 6 chr17 56525793 56525952 -28912528 - MIR3 SINE MIR -24 184 25 1912 123 3 27 chr17 56526035 56526327 -28912153 - AluSx SINE Alu -27 285 1 32 0 0 0 chr17 56527174 56527206 -28911274 + AT_rich Low_complexity Low_complexity 1 32 0 293 206 56 40 chr17 56527284 56527410 -28911070 - HAL1 LINE L1 -110 2397 2270 267 257 76 0 chr17 56527438 56527543 -28910937 + HAL1 LINE L1 2110 2222 -285 2448 50 0 13 chr17 56527558 56527861 -28910619 - AluY SINE Alu -12 299 1 1113 148 12 0 chr17 56527893 56528062 -28910418 - FRAM SINE Alu -8 168 1 1474 252 102 54 chr17 56528228 56528965 -28909515 - HAL1 LINE L1 -417 2090 1319 2971 81 21 12 chr17 56528967 56529386 -28909094 - L1PB1 LINE L1 -1 6150 5728 407 248 19 9 chr17 56529555 56529660 -28908820 - HAL1 LINE L1 -1820 687 582 375 309 90 67 chr17 56529669 56529699 -28908781 - HAL1 LINE L1 -2044 463 435 207 0 0 0 chr17 56529699 56529722 -28908758 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 375 309 90 67 chr17 56529722 56530047 -28908433 - HAL1 LINE L1 -2072 435 100 744 320 144 25 chr17 56530371 56530408 -28908072 + L3 LINE CR1 702 733 -844 2178 87 0 3 chr17 56530408 56530694 -28907786 + AluSg SINE Alu 24 308 -2 744 320 144 25 chr17 56530694 56531219 -28907261 + L3 LINE CR1 733 1331 -246 257 279 0 10 chr17 56531543 56531647 -28906833 + T-rich Low_complexity Low_complexity 6 108 0 1416 126 8 4 chr17 56531683 56531921 -28906559 - L1MA4 LINE L1 -9 6291 6053 272 238 25 0 chr17 56531925 56532005 -28906475 - L1MA10 LINE L1 -13 6321 6240 311 229 49 45 chr17 56532012 56532300 -28906180 - L1MEc LINE L1 -4076 2531 2076 360 0 0 0 chr17 56532320 56532360 -28906120 + (TA)n Simple_repeat Simple_repeat 2 41 0 2162 134 0 3 chr17 56532360 56532667 -28905813 - AluSp SINE Alu -7 306 1 463 286 30 10 chr17 56532677 56532880 -28905600 - L1MEc LINE L1 -4743 1683 1477 3449 247 31 67 chr17 56532985 56533067 -28905413 - L1MEc LINE L1 -4877 1519 1436 2199 89 10 3 chr17 56533067 56533369 -28905111 + AluSg SINE Alu 2 305 -5 3449 247 31 67 chr17 56533369 56533971 -28904509 - L1MEc LINE L1 -4960 1436 814 2257 71 0 3 chr17 56533971 56534266 -28904214 - L1PA7 LINE L1 0 6154 5861 3449 247 31 67 chr17 56534266 56535124 -28903356 - L1MEc LINE L1 -5582 814 32 1954 134 0 24 chr17 56535156 56535497 -28902983 + AluSx SINE Alu 1 334 0 22 35 0 0 chr17 56535736 56535765 -28902715 + AT_rich Low_complexity Low_complexity 1 29 0 2325 109 0 3 chr17 56535767 56536078 -28902402 + AluSg SINE Alu 1 310 0 260 273 41 66 chr17 56536100 56536221 -28902259 + L2 LINE L2 3115 3232 -81 * 342 301 14 48 chr17 56536220 56536366 -28902114 - MER5A DNA MER1_type -32 157 17 1806 137 102 0 chr17 56536401 56536716 -28901764 + MER7A DNA MER2_type 2 346 0 211 278 0 0 chr17 56536741 56536795 -28901685 + (TG)n Simple_repeat Simple_repeat 1 54 0 248 274 21 53 chr17 56536843 56536938 -28901542 - L2 LINE L2 -545 2769 2678 374 250 76 52 chr17 56536991 56537192 -28901288 + MIR SINE MIR 17 226 -36 1812 181 0 22 chr17 56537450 56537765 -28900715 + AluJb SINE Alu 1 308 -4 230 258 16 8 chr17 56537971 56538042 -28900438 + CT-rich Low_complexity Low_complexity 2 125 0 1334 307 114 27 chr17 56538378 56539364 -28899116 - L2 LINE L2 -24 3289 2210 402 295 86 28 chr17 56539401 56539801 -28898679 - MLT1J LTR MaLR -40 471 1 945 184 40 79 chr17 56539829 56540057 -28898423 - MER20 DNA MER1_type 0 219 1 1146 317 60 14 chr17 56540063 56540577 -28897903 - L2 LINE L2 -1131 2183 1646 263 219 0 16 chr17 56540702 56540766 -28897714 + MLT1A2 LTR MaLR 1 63 -311 1780 218 37 78 chr17 56540974 56541603 -28896877 - LTR9 LTR ERV1 0 612 10 679 89 0 40 chr17 56542491 56542592 -28895888 + U6 snRNA snRNA 1 97 -10 419 285 105 49 chr17 56542733 56543179 -28895301 - L1M4 LINE L1 -1070 5076 4606 494 289 107 40 chr17 56543181 56543554 -28894926 - L1MEc LINE L1 -3976 2420 2023 275 328 0 16 chr17 56543862 56543990 -28894490 - HAL1 LINE L1 -861 1646 1521 243 266 14 108 chr17 56544158 56544328 -28894152 - L1MEc LINE L1 -4893 1312 1192 1725 211 0 6 chr17 56544328 56544640 -28893840 - AluJo SINE Alu -2 310 1 243 266 14 108 chr17 56544640 56544830 -28893650 - L1MEc LINE L1 -5013 1192 986 30 69 0 0 chr17 56544830 56544888 -28893592 + AT_rich Low_complexity Low_complexity 1 58 0 21 57 0 0 chr17 56544913 56544948 -28893532 + AT_rich Low_complexity Low_complexity 1 35 0 1732 174 0 39 chr17 56545530 56545857 -28892623 - AluJb SINE Alu 0 312 1 449 245 84 60 chr17 56546938 56547187 -28891293 + L1MC5 LINE L1 7529 7783 -178 16752 32 1 6 chr17 56547192 56548719 -28889761 - L1P LINE L1 -1786 4360 2844 2565 71 0 0 chr17 56548719 56549029 -28889451 - AluY SINE Alu -1 310 1 16752 32 1 6 chr17 56549029 56549668 -28888812 - L1P LINE L1 -3302 2844 2204 8743 27 1 0 chr17 56549668 56551485 -28886995 + L1PA4 LINE L1 4351 6168 0 2087 108 7 0 chr17 56552351 56552657 -28885823 + AluSg SINE Alu 3 310 0 411 303 138 0 chr17 56552711 56552906 -28885574 - L1MCa LINE L1 -4928 1498 1277 35 71 0 0 chr17 56552964 56553034 -28885446 + AT_rich Low_complexity Low_complexity 1 70 0 207 0 0 0 chr17 56553301 56553324 -28885156 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 1310 76 0 0 chr17 56553326 56553498 -28884982 - L1PA8 LINE L1 -1 6171 6000 1119 236 6 70 chr17 56553551 56553907 -28884573 + MLT1A1 LTR MaLR 33 365 0 22 0 0 0 chr17 56553985 56554007 -28884473 + AT_rich Low_complexity Low_complexity 1 22 0 531 286 146 30 chr17 56554201 56554571 -28883909 - MLT1H1 LTR MaLR 0 555 143 340 171 23 0 chr17 56554672 56554760 -28883720 + HSMAR2 DNA Mariner 1210 1299 -3 509 296 82 38 chr17 56554971 56555289 -28883191 + L1ME LINE L1 5493 5824 -297 2182 127 3 0 chr17 56555346 56555654 -28882826 + AluSq SINE Alu 1 309 -4 936 193 28 0 chr17 56555868 56556044 -28882436 + Tigger3(Golem) DNA MER2_type 1 181 -2848 402 329 21 7 chr17 56556827 56556967 -28881513 - MIR SINE MIR -120 142 1 295 331 83 30 chr17 56557591 56557669 -28880811 - MIR SINE MIR -118 144 55 2274 122 0 3 chr17 56557669 56557980 -28880500 + AluSg SINE Alu 1 310 0 295 331 83 30 chr17 56557980 56558034 -28880446 - MIR SINE MIR -207 55 5 302 338 84 67 chr17 56558047 56558464 -28880016 - L2 LINE L2 -10 3262 2839 380 293 23 30 chr17 56558504 56558637 -28879843 - MIR SINE MIR 0 262 131 467 273 15 0 chr17 56559246 56559378 -28879102 - MER94 DNA DNA 0 134 1 2306 114 3 0 chr17 56560469 56560777 -28877703 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr17 56560852 56560873 -28877607 + AT_rich Low_complexity Low_complexity 1 21 0 1478 46 15 0 chr17 56561517 56561712 -28876768 - L1MA1 LINE L1 -8 6294 6097 1065 34 20 0 chr17 56561713 56561862 -28876618 - L1MA1 LINE L1 -110 6192 6041 1026 172 6 6 chr17 56563519 56563693 -28874787 + AluJb SINE Alu 137 310 -2 453 219 7 73 chr17 56564098 56564235 -28874245 + L2 LINE L2 3181 3308 -5 24 32 0 0 chr17 56564282 56564313 -28874167 + AT_rich Low_complexity Low_complexity 1 31 0 1531 167 10 47 chr17 56564320 56564620 -28873860 - AluJo SINE Alu -23 289 1 294 274 101 30 chr17 56564789 56564957 -28873523 - L2 LINE L2 0 3313 3134 236 298 106 11 chr17 56564965 56565059 -28873421 - MIR SINE MIR -1 261 159 1102 83 0 0 chr17 56565065 56565198 -28873282 + AluSp SINE Alu 1 133 -180 4091 171 25 33 chr17 56565202 56565998 -28872482 + MER52A LTR ERV1 966 1755 0 1724 120 41 19 chr17 56565999 56566479 -28872001 - L1P5 LINE L1 -598 5556 5063 2099 95 0 0 chr17 56566640 56566914 -28871566 + AluY SINE Alu 30 303 -8 442 332 21 21 chr17 56567463 56567653 -28870827 - MIR SINE MIR -58 204 15 282 171 61 24 chr17 56567755 56567837 -28870643 - L1MB8 LINE L1 0 6178 6094 1029 159 48 9 chr17 56567857 56568084 -28870396 - L1MB4 LINE L1 -6 6174 5939 227 294 0 15 chr17 56568108 56568176 -28870304 + L2 LINE L2 3246 3312 -1 2149 101 28 0 chr17 56569017 56569304 -28869176 + AluSg1 SINE Alu 1 295 -14 462 208 24 8 chr17 56570137 56570262 -28868218 - LTR37B LTR ERV1 0 468 342 586 223 80 86 chr17 56570363 56570664 -28867816 - LTR37B LTR ERV1 -164 304 6 1082 311 122 34 chr17 56570912 56571980 -28866500 + L2 LINE L2 2145 3312 -1 240 356 12 25 chr17 56572423 56572583 -28865897 + L2 LINE L2 2897 3054 -218 533 269 70 13 chr17 56572677 56572833 -28865647 + MIR SINE MIR 2 166 -96 818 85 8 8 chr17 56572837 56572955 -28865525 - AluSp/q SINE Alu -14 299 182 890 224 77 33 chr17 56572955 56573254 -28865226 - MER52A LTR ERV1 -1442 313 2 3740 109 36 5 chr17 56573254 56573833 -28864647 + L1PB3 LINE L1 5553 6149 -5 219 245 0 0 chr17 56573839 56573888 -28864592 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 305 159 16 0 chr17 56573901 56573964 -28864516 + (TA)n Simple_repeat Simple_repeat 1 64 0 34 19 0 19 chr17 56573989 56574014 -28864466 + AT_rich Low_complexity Low_complexity 1 25 -26 1916 173 0 3 chr17 56574014 56574315 -28864165 - AluSx SINE Alu -12 300 1 34 19 0 19 chr17 56574315 56574341 -28864139 + AT_rich Low_complexity Low_complexity 25 51 0 2250 110 3 0 chr17 56574971 56575262 -28863218 - AluSx SINE Alu -20 292 1 334 292 71 9 chr17 56575671 56575784 -28862696 + L2 LINE L2 3186 3305 -8 300 333 0 40 chr17 56575846 56575972 -28862508 + L2 LINE L2 2705 2825 -489 23 33 0 0 chr17 56576413 56576443 -28862037 + AT_rich Low_complexity Low_complexity 1 30 0 486 49 0 0 chr17 56576938 56576999 -28861481 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1878 146 16 32 chr17 56577002 56577310 -28861170 - AluSx SINE Alu -9 303 1 740 292 39 0 chr17 56579341 56579574 -28858906 + MIR SINE MIR 7 248 -14 322 309 48 48 chr17 56579714 56579882 -28858598 + MIR SINE MIR 20 187 -75 282 314 51 22 chr17 56580111 56580248 -28858232 + MIR SINE MIR 47 187 -75 283 250 0 0 chr17 56580274 56580330 -28858150 - L2 LINE L2 -25 3247 3192 180 0 0 0 chr17 56580403 56580423 -28858057 + (CAT)n Simple_repeat Simple_repeat 3 22 0 51 65 0 0 chr17 56580448 56580541 -28857939 + AT_rich Low_complexity Low_complexity 1 93 0 186 282 0 0 chr17 56580678 56580717 -28857763 + MER5B DNA MER1_type 140 178 0 1051 195 53 8 chr17 56580816 56581078 -28857402 + L1ME3 LINE L1 5754 6027 -135 23 0 0 0 chr17 56581213 56581236 -28857244 + AT_rich Low_complexity Low_complexity 1 23 0 2134 143 24 21 chr17 56581249 56581621 -28856859 - THE1C LTR MaLR 0 375 3 575 176 28 11 chr17 56581670 56581846 -28856634 + (TA)n Simple_repeat Simple_repeat 2 180 0 494 384 25 0 chr17 56583626 56583785 -28854695 + L2 LINE L2 3106 3268 -4 285 29 0 0 chr17 56585681 56585715 -28852765 + (A)n Simple_repeat Simple_repeat 1 34 0 2106 276 74 47 chr17 56586063 56586638 -28851842 - L1M4 LINE L1 -2129 3841 3283 6098 94 11 22 chr17 56586638 56587757 -28850723 - L1PB3 LINE L1 -4 6150 5042 2106 276 74 47 chr17 56587757 56588877 -28849603 - L1M4 LINE L1 -2687 3283 2103 2385 67 3 10 chr17 56588877 56589177 -28849303 - AluY SINE Alu -13 298 1 2106 276 74 47 chr17 56589177 56589352 -28849128 - L1M4 LINE L1 -3867 2103 1934 1387 205 147 18 chr17 56589502 56589951 -28848529 - Charlie1b DNA MER1_type -16 507 1 1037 207 5 5 chr17 56589960 56590148 -28848332 - MER5A DNA MER1_type -1 188 1 2203 104 0 35 chr17 56590214 56590531 -28847949 - AluSx SINE Alu -4 308 3 9917 227 61 30 chr17 56590548 56591180 -28847300 - L1MB2 LINE L1 0 5995 5384 1618 182 7 14 chr17 56591180 56591466 -28847014 - AluJb SINE Alu -26 286 3 9917 227 61 30 chr17 56591466 56591587 -28846893 - L1MB2 LINE L1 -611 5384 5268 2480 145 71 0 chr17 56591587 56592007 -28846473 + LTR47A LTR ERVL 3 452 0 9917 227 61 30 chr17 56592007 56592213 -28846267 - L1MB2 LINE L1 -727 5268 5070 2100 147 20 3 chr17 56592213 56592568 -28845912 + MER46B DNA MER2_type 1 236 0 9917 227 61 30 chr17 56592568 56597089 -28841391 - L1MB2 LINE L1 -925 5070 387 354 362 5 25 chr17 56597213 56597395 -28841085 - L1M4 LINE L1 -5213 678 237 550 305 45 60 chr17 56597490 56597887 -28840593 - L1MB2 LINE L1 -5500 391 1 312 310 30 85 chr17 56598039 56598604 -28839876 - HAL1 LINE L1 -849 1658 1125 274 296 105 13 chr17 56599762 56599797 -28838683 + MIR SINE MIR 83 113 -149 2546 65 0 0 chr17 56599797 56600107 -28838373 - AluY SINE Alu -1 310 1 274 296 105 13 chr17 56600107 56600223 -28838257 + MIR SINE MIR 113 248 -14 285 98 0 0 chr17 56602312 56602353 -28836127 + (TG)n Simple_repeat Simple_repeat 1 41 0 2247 116 0 3 chr17 56602476 56602786 -28835694 - AluSc SINE Alu 0 309 1 386 276 89 64 chr17 56603353 56603556 -28834924 + MIR SINE MIR 29 236 -26 1077 221 78 40 chr17 56603643 56603964 -28834516 - MLT1C LTR MaLR 0 467 127 2005 131 0 29 chr17 56603964 56604300 -28834180 + AluSx SINE Alu 1 312 0 1077 221 78 40 chr17 56604300 56604376 -28834104 - MLT1C LTR MaLR -340 127 55 414 336 84 40 chr17 56604418 56604739 -28833741 + L2 LINE L2 2551 2885 -429 225 271 34 0 chr17 56605470 56605529 -28832951 + MIR3 SINE MIR 139 199 -9 2086 99 48 10 chr17 56605732 56606026 -28832454 - AluSc SINE Alu -4 305 1 1022 84 30 0 chr17 56606052 56606219 -28832261 + (TTTC)n Simple_repeat Simple_repeat 1 172 0 322 137 14 27 chr17 56606228 56606301 -28832179 + CT-rich Low_complexity Low_complexity 3 74 0 651 283 86 3 chr17 56606766 56607056 -28831424 + L1ME4a LINE L1 5550 5863 -258 1484 104 41 0 chr17 56607120 56607341 -28831139 - MER30 DNA MER1_type 0 230 1 22 70 0 0 chr17 56607499 56607542 -28830938 + AT_rich Low_complexity Low_complexity 1 43 0 290 317 100 8 chr17 56607710 56607830 -28830650 - L2 LINE L2 0 3313 3183 683 324 101 0 chr17 56607877 56608183 -28830297 - MLT1J2 LTR MaLR -39 411 75 362 307 90 42 chr17 56608567 56608733 -28829747 + MIR SINE MIR 37 210 -52 25 51 0 0 chr17 56608781 56608820 -28829660 + AT_rich Low_complexity Low_complexity 1 39 0 692 282 99 27 chr17 56609064 56609610 -28828870 - L1MC4a LINE L1 -403 5759 5278 311 338 116 26 chr17 56609847 56610149 -28828331 - L1MC4a LINE L1 -1131 5015 4687 391 305 130 73 chr17 56610311 56610515 -28827965 - L1MC4a LINE L1 -1672 4474 4283 1549 111 4 0 chr17 56610515 56610749 -28827731 - L1MA6 LINE L1 -5 6295 6061 391 305 130 73 chr17 56610749 56611297 -28827183 - L1MC4a LINE L1 -1863 4283 3679 524 304 93 46 chr17 56611393 56611889 -28826591 - L1MC4a LINE L1 -2682 3464 2946 533 228 24 6 chr17 56612361 56612528 -28825952 - MER104 DNA Tc2 -10 170 1 544 287 69 9 chr17 56613333 56613551 -28824929 + MIR SINE MIR 17 247 -15 2333 94 0 54 chr17 56614390 56614721 -28823759 + AluSp SINE Alu 1 313 0 273 278 56 11 chr17 56615096 56615186 -28823294 - MIR SINE MIR -57 205 112 318 180 0 0 chr17 56615602 56615663 -28822817 + (TG)n Simple_repeat Simple_repeat 2 62 0 2515 107 17 3 chr17 56616874 56617228 -28821252 - THE1B LTR MaLR -1 363 5 465 19 0 0 chr17 56617228 56617282 -28821198 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 406 205 0 0 chr17 56617820 56617898 -28820582 + MER96 DNA MER1_type? 2 79 -96 2728 280 114 48 chr17 56618034 56619074 -28819406 - HAL1 LINE L1 -181 2326 1356 1213 237 154 28 chr17 56619074 56619567 -28818913 - MLT1H1 LTR MaLR 0 555 1 2728 280 114 48 chr17 56619567 56620708 -28817772 - HAL1 LINE L1 -1151 1356 1 583 214 47 94 chr17 56621012 56621246 -28817234 - MIR SINE MIR -31 231 9 1870 145 13 20 chr17 56621512 56621816 -28816664 + AluJb SINE Alu 1 302 -10 340 366 8 25 chr17 56621844 56622076 -28816404 - MIR SINE MIR -19 243 19 196 309 162 0 chr17 56622211 56622279 -28816201 + MIR SINE MIR 76 154 -108 376 273 167 0 chr17 56622555 56622705 -28815775 - MER5A DNA MER1_type -6 183 9 218 222 0 144 chr17 56622739 56622829 -28815651 + MIR SINE MIR 74 150 -58 1508 188 17 20 chr17 56622849 56623142 -28815338 - AluJo SINE Alu -20 292 1 2083 118 43 38 chr17 56623207 56623580 -28814900 + THE1C LTR MaLR 1 375 0 237 295 21 0 chr17 56624265 56624360 -28814120 + MLT1F1-int LTR MaLR 504 600 -771 268 326 33 28 chr17 56624533 56624714 -28813766 + MLT1F1-int LTR MaLR 701 882 -489 262 268 62 117 chr17 56624941 56625232 -28813248 + MLT1F1-int LTR MaLR 1072 1346 -25 629 286 57 65 chr17 56625266 56625519 -28812961 + MLT1F1 LTR MaLR 7 257 -310 754 141 8 0 chr17 56625519 56625640 -28812840 - FLAM_C SINE Alu -11 122 1 629 286 57 65 chr17 56625640 56625788 -28812692 + MLT1F1 LTR MaLR 257 405 -162 2710 211 101 20 chr17 56625792 56626970 -28811510 - L1MB7 LINE L1 -11 6173 4848 1214 122 9 19 chr17 56626970 56627184 -28811296 - L1MA5A LINE L1 -3 6294 6083 2710 211 101 20 chr17 56627184 56627425 -28811055 - L1MB7 LINE L1 -1336 4848 4628 677 198 17 62 chr17 56627425 56627602 -28810878 + MLT1F1 LTR MaLR 399 567 0 266 61 0 0 chr17 56627863 56627896 -28810584 + MER58 DNA MER1_type 2388 2420 0 283 322 0 0 chr17 56627896 56627986 -28810494 - L2 LINE L2 -1036 2278 2189 216 292 45 11 chr17 56628667 56628756 -28809724 - L3b LINE CR1 -206 1377 1286 186 301 118 73 chr17 56628909 56628932 -28809548 + MIR3 SINE MIR 20 41 -167 1762 184 45 11 chr17 56628932 56629285 -28809195 - MLT1A1 LTR MaLR 0 365 1 186 301 118 73 chr17 56629285 56629397 -28809083 + MIR3 SINE MIR 41 161 -47 394 330 45 9 chr17 56631493 56631605 -28806875 + L2 LINE L2 3148 3263 -9 1223 194 70 30 chr17 56632069 56632398 -28806082 + MLT1E3 LTR MaLR 278 619 -5 1693 146 33 36 chr17 56632626 56632901 -28805579 + AluJo SINE Alu 38 311 -1 216 250 185 37 chr17 56633010 56633118 -28805362 - MIR3 SINE MIR -73 135 12 323 310 52 17 chr17 56633610 56633726 -28804754 - L2 LINE L2 0 3272 3153 182 293 0 0 chr17 56634049 56634090 -28804390 + L2 LINE L2 3266 3306 -7 863 193 11 6 chr17 56635096 56635272 -28803208 + MER20 DNA MER1_type 43 219 0 2230 62 0 86 chr17 56635438 56635763 -28802717 - AluY SINE Alu -14 297 1 277 268 163 44 chr17 56637587 56637734 -28800746 + MIR3 SINE MIR 3 156 -62 1300 275 48 3 chr17 56638718 56639108 -28799372 - LTR33 LTR ERVL -19 502 93 302 304 0 70 chr17 56639231 56639346 -28799134 + MIR3 SINE MIR 10 116 -92 215 326 106 51 chr17 56640372 56640608 -28797872 + L2 LINE L2 2969 3217 -55 1464 183 22 61 chr17 56640989 56641301 -28797179 + AluJb SINE Alu 1 300 -12 184 293 98 0 chr17 56641422 56641504 -28796976 + L2 LINE L2 2619 2708 -606 526 281 39 54 chr17 56641666 56641869 -28796611 - MIR SINE MIR -14 248 49 372 287 35 0 chr17 56642198 56642313 -28796167 + L2 LINE L2 3192 3310 -3 23 0 0 0 chr17 56642600 56642623 -28795857 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr17 56643622 56643652 -28794828 + AT_rich Low_complexity Low_complexity 1 30 0 256 159 0 0 chr17 56643653 56643697 -28794783 - L1MA4A LINE L1 -5 6298 6255 2212 188 66 22 chr17 56643873 56644330 -28794150 - MLT1D LTR MaLR -26 479 3 2012 222 27 49 chr17 56644325 56644839 -28793641 - MLT1D LTR MaLR -2 503 1 * 346 284 55 24 chr17 56644880 56645007 -28793473 - MIR SINE MIR -62 146 16 2151 132 134 16 chr17 56645402 56645782 -28792698 + MSTA LTR MaLR 1 425 -3 256 200 0 0 chr17 56646148 56646193 -28792287 + L2 LINE L2 3192 3236 -77 979 129 71 0 chr17 56647228 56647398 -28791082 + L1MA3 LINE L1 6124 6305 0 2989 204 50 11 chr17 56647523 56648166 -28790314 + L1MB8 LINE L1 5511 6178 0 340 284 69 9 chr17 56648290 56648406 -28790074 + MIR SINE MIR 50 172 -90 1760 64 5 0 chr17 56648809 56649027 -28789453 + L1MA1 LINE L1 6084 6302 0 186 209 23 0 chr17 56649869 56649912 -28788568 - L2 LINE L2 -4 3268 3225 27 0 0 0 chr17 56650479 56650506 -28787974 + AT_rich Low_complexity Low_complexity 1 27 0 195 246 0 0 chr17 56650517 56650574 -28787906 + CT-rich Low_complexity Low_complexity 1 57 0 286 325 24 24 chr17 56650577 56650684 -28787796 + L2 LINE L2 3137 3246 -26 306 106 0 0 chr17 56650684 56650731 -28787749 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 191 321 0 0 chr17 56650731 56650787 -28787693 - L2 LINE L2 -10 3303 3248 369 283 40 52 chr17 56650887 56651060 -28787420 + MIR SINE MIR 27 197 -65 817 210 66 6 chr17 56652534 56652701 -28785779 + MIR SINE MIR 65 241 -21 282 217 0 0 chr17 56652805 56652874 -28785606 + (TATG)n Simple_repeat Simple_repeat 4 72 0 187 240 93 27 chr17 56653848 56653923 -28784557 - MIR SINE MIR -18 244 165 655 282 7 86 chr17 56654026 56654306 -28784174 + MIR SINE MIR 5 262 0 2202 121 0 0 chr17 56654380 56654677 -28783803 - AluSx SINE Alu -15 297 1 870 213 7 0 chr17 56654714 56654864 -28783616 + FRAM SINE Alu 4 154 -12 1355 215 150 26 chr17 56654910 56655296 -28783184 - MER57B LTR ERV1 0 434 1 307 290 46 83 chr17 56656260 56656477 -28782003 + MIR SINE MIR 49 257 -5 205 372 47 12 chr17 56657234 56657320 -28781160 - L2 LINE L2 -73 3199 3111 419 241 111 30 chr17 56658125 56658310 -28780170 + MIR SINE MIR 10 212 -50 254 164 18 0 chr17 56659094 56659149 -28779331 + (TCTCTG)n Simple_repeat Simple_repeat 5 60 0 321 299 160 35 chr17 56659649 56659880 -28778600 + MIR SINE MIR 3 262 0 260 347 83 16 chr17 56660459 56660580 -28777900 - L2 LINE L2 -1 3271 3143 192 40 0 0 chr17 56660827 56660852 -28777628 + (TTG)n Simple_repeat Simple_repeat 1 25 0 1747 169 10 13 chr17 56662205 56662518 -28775962 + AluJb SINE Alu 1 312 0 414 250 71 45 chr17 56662660 56662772 -28775708 - MIR3 SINE MIR -47 161 47 2318 219 57 6 chr17 56663010 56663502 -28774978 - LTR53 LTR ERVL 0 519 3 338 358 19 19 chr17 56664509 56664671 -28773809 + CT-rich Low_complexity Low_complexity 5 166 0 274 297 72 43 chr17 56664934 56665072 -28773408 + MIR3 SINE MIR 15 156 -52 660 45 0 0 chr17 56665378 56665466 -28773014 + (TG)n Simple_repeat Simple_repeat 2 89 0 581 112 71 20 chr17 56666523 56666621 -28771859 + THE1C LTR MaLR 1 103 -272 1738 169 62 56 chr17 56666625 56666998 -28771482 - THE1C LTR MaLR 0 375 1 9382 122 38 11 chr17 56666998 56668421 -28770059 - THE1C-int LTR MaLR 0 1580 120 452 162 0 0 chr17 56668522 56668596 -28769884 + MSTA LTR MaLR 355 428 0 1331 197 36 30 chr17 56670250 56670555 -28767925 + AluJo SINE Alu 1 307 -5 2469 70 0 0 chr17 56670608 56670906 -28767574 + AluY SINE Alu 1 298 -13 221 276 126 0 chr17 56673529 56673616 -28764864 - L2 LINE L2 -50 3222 3125 213 244 0 49 chr17 56673979 56674061 -28764419 + CT-rich Low_complexity Low_complexity 2 79 0 276 363 44 0 chr17 56674459 56674572 -28763908 - L2 LINE L2 -10 3262 3145 260 196 0 0 chr17 56674670 56674726 -28763754 + L1ME4a LINE L1 6062 6117 -4 222 303 59 29 chr17 56674994 56675169 -28763311 + L2 LINE L2 2816 2992 -321 807 254 47 19 chr17 56675192 56675203 -28763277 + MER20 DNA MER1_type 1 10 -209 315 0 0 0 chr17 56675203 56675238 -28763242 + (TG)n Simple_repeat Simple_repeat 1 35 0 807 254 47 19 chr17 56675238 56675439 -28763041 + MER20 DNA MER1_type 10 219 0 235 304 0 0 chr17 56675552 56675608 -28762872 + L2 LINE L2 3168 3223 -49 542 47 12 47 chr17 56676876 56676961 -28761519 - L1MA4A LINE L1 -4 6299 6218 225 212 10 61 chr17 56677062 56677161 -28761319 - L1MC4 LINE L1 -1339 6703 6610 497 284 29 44 chr17 56677460 56677664 -28760816 - MIR SINE MIR -28 234 34 753 301 87 19 chr17 56677748 56678117 -28760363 - LTR33 LTR ERVL -3 518 125 195 250 0 0 chr17 56678986 56679022 -28759458 - MIR SINE MIR -58 150 115 239 217 120 43 chr17 56679168 56679260 -28759220 + MIR SINE MIR 107 205 -57 425 146 21 62 chr17 56679409 56679505 -28758975 - L1MC3 LINE L1 0 7785 7694 1982 320 87 40 chr17 56679505 56680956 -28757524 + L2 LINE L2 1623 3138 -175 195 258 108 21 chr17 56680982 56681075 -28757405 + L2 LINE L2 3171 3271 -1 2341 162 28 14 chr17 56681176 56681535 -28756945 + THE1B LTR MaLR 1 364 0 12265 105 3 2 chr17 56681535 56683109 -28755371 + THE1B-int LTR MaLR 1 1576 -4 2273 155 34 8 chr17 56683114 56683469 -28755011 + THE1B LTR MaLR 1 364 0 391 333 76 18 chr17 56683685 56683856 -28754624 - MIR SINE MIR -32 230 50 401 214 71 0 chr17 56684106 56684190 -28754290 - L2 LINE L2 -23 3249 3160 576 296 63 85 chr17 56684502 56684867 -28753613 - L2 LINE L2 -767 2547 2191 285 260 13 13 chr17 56685553 56685630 -28752850 + MLT1L LTR MaLR 3 79 -536 243 213 16 0 chr17 56685652 56685713 -28752767 - MER116 DNA Mariner -12 68 7 271 232 0 24 chr17 56685961 56686043 -28752437 + MLT1J LTR MaLR 431 510 -1 506 270 22 27 chr17 56686231 56686416 -28752064 - MIR SINE MIR 0 262 79 1031 206 15 10 chr17 56686571 56686775 -28751705 + MER3 DNA MER1_type 3 207 -2 299 255 90 19 chr17 56687510 56687644 -28750836 + MIR3 SINE MIR 1 150 -67 502 300 20 35 chr17 56688142 56688342 -28750138 + L2 LINE L2 2577 2773 -541 1071 225 28 0 chr17 56688384 56688602 -28749878 - MER58A DNA MER1_type 0 224 1 295 262 227 7 chr17 56689581 56689722 -28748758 - MIR SINE MIR -7 255 84 243 0 0 0 chr17 56690358 56690385 -28748095 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 283 228 63 0 chr17 56690419 56690498 -28747982 + L1ME3 LINE L1 6077 6160 -2 545 264 59 46 chr17 56691473 56691712 -28746768 - L1MC5 LINE L1 -17 7944 7703 212 248 221 0 chr17 56691733 56691846 -28746634 + L2 LINE L2 3172 3309 -4 2260 109 3 3 chr17 56692321 56692623 -28745857 - AluSp SINE Alu -11 302 1 503 296 111 9 chr17 56692774 56693000 -28745480 + LTR33 LTR ERVL 1 249 -272 2333 122 60 28 chr17 56693051 56693404 -28745076 - THE1B LTR MaLR 0 364 1 350 100 0 0 chr17 56693529 56693579 -28744901 - L1PA16 LINE L1 0 6166 6117 21 0 0 0 chr17 56694800 56694821 -28743659 + AT_rich Low_complexity Low_complexity 1 21 0 2231 147 132 5 chr17 56696146 56696526 -28741954 - MSTA LTR MaLR 0 428 1 3919 94 171 40 chr17 56696994 56697602 -28740878 + LTR12 LTR ERV1 1 688 0 206 300 25 83 chr17 56697825 56697945 -28740535 + L2 LINE L2 2417 2529 -785 22 35 0 0 chr17 56698293 56698322 -28740158 + AT_rich Low_complexity Low_complexity 1 29 0 319 244 47 55 chr17 56698796 56698923 -28739557 + LTR67 LTR ERVL 426 551 -6 183 298 214 12 chr17 56699047 56699131 -28739349 - L2 LINE L2 -10 3262 3162 2493 143 42 3 chr17 56699351 56699735 -28738745 - MER57A LTR ERV1 -4 399 1 326 244 26 26 chr17 56699896 56700011 -28738469 - Charlie7 DNA MER1_type -9 2603 2489 367 224 61 91 chr17 56700251 56700416 -28738064 + L1MC5 LINE L1 7182 7341 -620 24 32 0 0 chr17 56700442 56700473 -28738007 + AT_rich Low_complexity Low_complexity 1 31 0 27 0 0 0 chr17 56700486 56700513 -28737967 + AT_rich Low_complexity Low_complexity 1 27 0 1280 196 134 36 chr17 56700514 56700660 -28737820 + L1MC5 LINE L1 7351 7481 -480 2233 120 23 47 chr17 56700660 56701044 -28737436 + THE1C LTR MaLR 1 375 0 1280 196 134 36 chr17 56701044 56701366 -28737114 + L1MC5 LINE L1 7481 7865 -96 335 330 2 26 chr17 56701396 56701566 -28736914 - MER5B DNA MER1_type -18 171 7 430 269 107 13 chr17 56702544 56702693 -28735787 - MIR SINE MIR -84 178 16 26 0 0 0 chr17 56703154 56703180 -28735300 + AT_rich Low_complexity Low_complexity 1 26 0 234 269 15 15 chr17 56703243 56703310 -28735170 + L2 LINE L2 3247 3313 0 305 191 282 30 chr17 56704184 56704315 -28734165 + L1MC5 LINE L1 7751 7914 -47 219 239 22 0 chr17 56704726 56704772 -28733708 + CT-rich Low_complexity Low_complexity 2 48 0 224 234 13 13 chr17 56706678 56706693 -28731787 + (CAA)n Simple_repeat Simple_repeat 2 16 -62 2394 89 0 13 chr17 56706693 56707008 -28731472 + AluY SINE Alu 1 311 0 224 234 13 13 chr17 56707008 56707069 -28731411 + (CAA)n Simple_repeat Simple_repeat 15 78 0 341 298 25 61 chr17 56707318 56707472 -28731008 + MIR SINE MIR 2 151 -62 261 270 54 36 chr17 56708087 56708198 -28730282 + L2 LINE L2 2849 2961 -353 314 123 18 0 chr17 56708257 56708314 -28730166 + (CA)n Simple_repeat Simple_repeat 2 59 0 405 237 92 30 chr17 56708395 56708526 -28729954 + MER5B DNA MER1_type 39 177 -1 382 239 40 152 chr17 56708557 56708905 -28729575 + L2 LINE L2 3005 3313 0 221 288 15 15 chr17 56708910 56708976 -28729504 - MIR SINE MIR -188 74 9 211 286 0 16 chr17 56709264 56709327 -28729153 + GA-rich Low_complexity Low_complexity 1 62 0 2248 110 3 25 chr17 56710153 56710470 -28728010 + AluSx SINE Alu 1 310 -2 291 232 53 86 chr17 56710619 56710770 -28727710 + L2 LINE L2 2914 3059 -213 2124 104 0 44 chr17 56711099 56711417 -28727063 - AluSg SINE Alu -6 304 1 199 236 56 14 chr17 56711469 56711513 -28726967 - L2 LINE L2 -3 3269 3223 604 279 116 34 chr17 56711513 56711746 -28726734 + MIR SINE MIR 2 253 -9 782 273 40 8 chr17 56711967 56712220 -28726260 + L1ME3A LINE L1 5450 5710 -460 826 163 28 0 chr17 56712222 56712340 -28726140 - MLT1F LTR MaLR -2 565 444 284 194 0 16 chr17 56712340 56712402 -28726078 - ORSL DNA AcHobo 0 275 215 381 127 16 0 chr17 56712448 56712511 -28725969 - ORSL DNA AcHobo -211 64 1 1311 219 40 69 chr17 56712518 56712939 -28725541 - MLT1F LTR MaLR -131 411 3 523 244 0 0 chr17 56712962 56713077 -28725403 + L1ME3A LINE L1 5727 5841 -329 277 333 151 26 chr17 56714641 56714833 -28723647 - MIR SINE MIR -34 228 13 307 338 29 11 chr17 56715688 56715873 -28722607 - MIR SINE MIR -26 236 48 307 319 35 0 chr17 56716847 56716963 -28721517 + MIR SINE MIR 69 188 -74 520 263 83 32 chr17 56717263 56717480 -28721000 - MIR SINE MIR -6 256 29 1969 113 41 14 chr17 56717668 56717960 -28720520 - AluSx SINE Alu -12 300 1 451 269 94 41 chr17 56718625 56718796 -28719684 + MIR3 SINE MIR 17 196 -12 1739 170 0 57 chr17 56719232 56719550 -28718930 + AluJb SINE Alu 1 300 -12 434 277 88 19 chr17 56720345 56720504 -28717976 + MLT1K LTR MaLR 2 171 -417 749 285 59 19 chr17 56720735 56720991 -28717489 - LTR67 LTR ERVL -291 266 1 2147 109 0 10 chr17 56721178 56721480 -28717000 + AluSg SINE Alu 5 303 -7 2075 184 11 22 chr17 56721488 56721857 -28716623 + MLT1A1 LTR MaLR 1 365 0 316 282 23 46 chr17 56721891 56722022 -28716458 + MIR SINE MIR 59 186 -76 317 335 57 42 chr17 56723372 56723584 -28714896 - L2 LINE L2 -183 3089 2875 337 232 286 24 chr17 56728139 56728307 -28710173 - MIR SINE MIR -1 261 50 441 0 0 0 chr17 56730332 56730381 -28708099 + (TG)n Simple_repeat Simple_repeat 2 50 0 196 194 0 0 chr17 56733155 56733186 -28705294 - MIR SINE MIR -187 75 45 243 224 41 92 chr17 56733566 56733664 -28704816 - L2 LINE L2 -39 3274 3182 180 288 192 0 chr17 56736343 56736416 -28702064 + MIR SINE MIR 27 113 -95 305 243 0 14 chr17 56737375 56737445 -28701035 + MER5A DNA MER1_type 35 103 -86 432 0 0 0 chr17 56737458 56737506 -28700974 + (TG)n Simple_repeat Simple_repeat 2 49 0 193 330 96 9 chr17 56737607 56737722 -28700758 + L2 LINE L2 2722 2846 -468 188 232 18 18 chr17 56737813 56737869 -28700611 + L2 LINE L2 2997 3052 -220 1211 172 18 27 chr17 56737939 56738160 -28700320 - MER20 DNA MER1_type 0 219 1 227 385 27 47 chr17 56738206 56738354 -28700126 + L2 LINE L2 3123 3267 -5 406 255 88 48 chr17 56738363 56738582 -28699898 + MIR SINE MIR 28 253 -9 656 117 0 8 chr17 56738999 56739127 -28699353 + (TC)n Simple_repeat Simple_repeat 2 128 0 325 368 0 0 chr17 56739447 56739561 -28698919 - MIR3 SINE MIR -1 207 94 312 28 0 0 chr17 56739912 56739948 -28698532 - L1MB1 LINE L1 -1 6167 6132 2758 109 8 16 chr17 56740099 56740474 -28698006 - THE1C LTR MaLR 0 375 4 434 267 147 32 chr17 56741052 56741337 -28697143 - L1ME4a LINE L1 -35 6086 5769 2257 92 0 0 chr17 56741990 56742283 -28696197 + AluY SINE Alu 17 309 -2 858 265 33 75 chr17 56742791 56743150 -28695330 - MLT1G1 LTR MaLR 0 595 252 342 256 103 13 chr17 56743252 56743471 -28695009 - MLT1F1 LTR MaLR -329 266 14 788 189 74 0 chr17 56743537 56743685 -28694795 - FRAM SINE Alu -17 159 1 301 319 129 26 chr17 56743727 56743959 -28694521 + MIR SINE MIR 7 262 0 2333 93 0 3 chr17 56743967 56744268 -28694212 - AluSg SINE Alu -10 300 1 639 169 59 8 chr17 56744385 56744503 -28693977 + FLAM_C SINE Alu 1 124 -19 7696 25 0 0 chr17 56744781 56745790 -28692690 + L1PA3 LINE L1 5147 6155 0 1265 310 98 54 chr17 56745845 56746787 -28691693 - L2 LINE L2 -57 3256 2289 31 44 0 0 chr17 56748262 56748307 -28690173 + AT_rich Low_complexity Low_complexity 1 45 0 348 289 103 48 chr17 56748450 56748723 -28689757 - L1ME LINE L1 -299 5822 5535 286 311 195 31 chr17 56749271 56749528 -28688952 + MLT1L LTR MaLR 317 615 0 2750 176 65 17 chr17 56749541 56750139 -28688341 + MER92B LTR ERV1 3 629 -7 261 148 70 0 chr17 56750410 56750538 -28687942 + (TA)n Simple_repeat Simple_repeat 1 137 0 403 259 38 51 chr17 56750799 56750957 -28687523 - MIR SINE MIR -41 221 66 199 228 99 79 chr17 56751145 56751246 -28687234 - MIR3 SINE MIR -99 109 7 423 287 47 0 chr17 56751564 56751693 -28686787 + MIR SINE MIR 128 262 0 183 240 60 0 chr17 56751727 56751777 -28686703 - MIR SINE MIR -98 164 112 267 255 108 29 chr17 56751820 56751922 -28686558 - MIR SINE MIR -43 219 110 491 321 18 6 chr17 56752729 56752894 -28685586 - MIR SINE MIR -4 258 92 430 188 0 0 chr17 56754295 56754364 -28684116 + MER5A DNA MER1_type 1 69 -120 229 241 89 0 chr17 56754474 56754553 -28683927 - L1MC4 LINE L1 -1345 6697 6612 252 0 0 0 chr17 56754577 56754605 -28683875 + (TG)n Simple_repeat Simple_repeat 2 29 0 355 218 77 0 chr17 56754605 56754683 -28683797 + MIR SINE MIR 119 202 -60 233 152 0 0 chr17 56754687 56754720 -28683760 - MER5A DNA MER1_type -1 188 156 2961 171 137 82 chr17 56755033 56755877 -28682603 + MER21A LTR ERV1 24 914 -17 235 221 118 15 chr17 56755899 56755967 -28682513 - L3 LINE CR1 -123 1454 1380 321 344 8 38 chr17 56755989 56756120 -28682360 + MIR SINE MIR 20 146 -116 606 272 138 9 chr17 56756266 56756490 -28681990 + MIR SINE MIR 8 260 -2 202 400 47 21 chr17 56756582 56756817 -28681663 - L2 LINE L2 -634 2680 2440 872 116 0 68 chr17 56756817 56756964 -28681516 + FLAM_C SINE Alu 1 137 -6 190 231 77 39 chr17 56757072 56757124 -28681356 + L2 LINE L2 3217 3270 -2 314 128 20 118 chr17 56757362 56757464 -28681016 - MER20 DNA MER1_type -1 218 127 313 309 58 37 chr17 56757664 56757855 -28680625 + MIR3 SINE MIR 4 198 -10 310 286 80 123 chr17 56758384 56758894 -28679586 + L1M2 LINE L1 468 955 -5894 356 242 137 0 chr17 56759286 56759410 -28679070 + Charlie4 DNA MER1_type 1818 1958 -3 186 244 139 17 chr17 56759673 56759788 -28678692 + MIR SINE MIR 119 247 -15 1843 189 15 0 chr17 56761203 56761546 -28676934 - MER7A DNA MER2_type 0 346 1 452 288 14 14 chr17 56761907 56762122 -28676358 + L1MEd LINE L1 895 1109 -5010 2161 197 21 26 chr17 56762367 56762901 -28675579 + L1ME LINE L1 5275 5805 -361 216 0 0 0 chr17 56762901 56762925 -28675555 + (TG)n Simple_repeat Simple_repeat 2 25 0 1855 248 45 49 chr17 56762925 56763769 -28674711 + L1MC4 LINE L1 6705 7545 -497 616 280 52 32 chr17 56763870 56764213 -28674267 + L1MC4 LINE L1 7693 8042 0 507 292 71 22 chr17 56764220 56764815 -28673665 + L1MEd LINE L1 2193 2816 -3313 294 213 25 12 chr17 56764908 56764988 -28673492 + LTR33A LTR ERVL 442 522 -1 296 300 70 24 chr17 56765355 56765768 -28672712 + L1MB8 LINE L1 4902 5333 -813 310 266 198 24 chr17 56765793 56766241 -28672239 + L1MB8 LINE L1 5382 5898 -280 24 53 0 0 chr17 56766345 56766383 -28672097 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr17 56766467 56766495 -28671985 + AT_rich Low_complexity Low_complexity 1 28 0 1824 184 115 80 chr17 56766664 56767187 -28671293 - MER44D DNA MER2_type -9 596 1 237 325 49 8 chr17 56767391 56767514 -28670966 + MIR SINE MIR 94 221 -41 872 138 0 0 chr17 56767649 56767779 -28670701 + AluSg/x SINE Alu 152 281 -31 198 0 0 0 chr17 56767779 56767801 -28670679 + (CA)n Simple_repeat Simple_repeat 1 22 0 610 314 64 10 chr17 56767947 56768151 -28670329 - MIR SINE MIR -20 242 28 278 193 61 18 chr17 56768616 56768697 -28669783 - MIR3 SINE MIR -46 162 76 466 291 144 22 chr17 56769347 56769625 -28668855 + L2 LINE L2 2446 2757 -557 1923 143 0 36 chr17 56869790 56870097 -28568383 - AluSx SINE Alu -16 296 1 2082 124 3 9 chr17 56870155 56870492 -28567988 - AluSq SINE Alu 0 313 1 225 132 0 0 chr17 56871224 56871262 -28567218 + MIR SINE MIR 109 146 -62 2090 110 7 16 chr17 56871293 56871602 -28566878 + AluSp SINE Alu 1 306 -7 1193 110 0 0 chr17 56871691 56871855 -28566625 - AluSg/x SINE Alu -16 293 130 2264 99 0 3 chr17 56871866 56872169 -28566311 - AluSx SINE Alu -10 302 1 297 240 39 10 chr17 56872211 56872315 -28566165 + L2 LINE L2 2867 2973 -299 1196 167 187 19 chr17 56872545 56872693 -28565787 - AluSg SINE Alu 0 328 206 2287 103 0 0 chr17 56872693 56872995 -28565485 - AluSx SINE Alu -10 302 1 1196 167 187 19 chr17 56872995 56873131 -28565349 - AluSg SINE Alu -122 206 1 2600 42 0 0 chr17 56873182 56873489 -28564991 - AluY SINE Alu -4 307 1 1498 201 89 20 chr17 56873493 56873514 -28564966 - L1MB5 LINE L1 -36 6138 6120 1709 128 8 4 chr17 56873514 56873771 -28564709 + AluSx SINE Alu 47 304 -8 1498 201 89 20 chr17 56873771 56874141 -28564339 - L1MB5 LINE L1 -54 6120 5720 2136 103 0 0 chr17 56874156 56874464 -28564016 - AluSx SINE Alu 0 308 1 240 242 142 50 chr17 56874611 56874731 -28563749 + MIR SINE MIR 111 241 -21 2235 110 0 0 chr17 56874744 56875043 -28563437 - AluSx SINE Alu -13 299 1 990 106 0 0 chr17 56875093 56875225 -28563255 - FLAM_C SINE Alu 0 133 2 181 261 200 0 chr17 56875601 56875666 -28562814 + L2 LINE L2 2941 3018 -254 2475 56 3 0 chr17 56875718 56876020 -28562460 - AluY SINE Alu -8 303 1 1712 133 43 36 chr17 56876020 56876199 -28562281 - AluJo SINE Alu -8 304 121 2216 121 0 3 chr17 56876199 56876512 -28561968 + AluSx SINE Alu 1 312 0 1712 133 43 36 chr17 56876512 56876634 -28561846 - AluJo SINE Alu -191 121 1 2008 140 0 0 chr17 56876664 56876956 -28561524 + AluSx SINE Alu 1 292 -20 271 239 14 0 chr17 56877405 56877476 -28561004 - L2 LINE L2 -215 3057 2986 279 276 204 13 chr17 56877514 56877739 -28560741 - L2 LINE L2 -85 3187 2920 440 338 0 10 chr17 56878122 56878320 -28560160 - L2 LINE L2 -263 3050 2855 270 273 0 23 chr17 56878907 56878995 -28559485 - L2 LINE L2 -210 3062 2977 1735 139 0 43 chr17 56879527 56879829 -28558651 + AluJo SINE Alu 1 289 -23 2264 116 3 0 chr17 56880463 56880773 -28557707 - AluSx SINE Alu -1 311 1 1923 132 3 46 chr17 56881244 56881390 -28557090 + AluJo SINE Alu 1 152 -160 2290 78 3 0 chr17 56881390 56881683 -28556797 + AluSp SINE Alu 1 294 -19 1923 132 3 46 chr17 56881683 56881862 -28556618 + AluJo SINE Alu 152 312 0 218 250 0 15 chr17 56881873 56881941 -28556539 - L2 LINE L2 -220 3052 2986 2074 131 3 0 chr17 56881993 56882284 -28556196 + AluSx SINE Alu 3 294 -18 866 163 65 0 chr17 56882284 56882437 -28556043 + AluJo/FRAM SINE Alu 134 296 -16 271 233 33 11 chr17 56882718 56882808 -28555672 + (CCCG)n Simple_repeat Simple_repeat 1 92 0 2314 97 0 3 chr17 56883346 56883656 -28554824 - AluSg SINE Alu -1 309 1 182 282 13 51 chr17 56884082 56884160 -28554320 - L2 LINE L2 -227 3045 2971 272 336 19 19 chr17 56884477 56884581 -28553899 + MIR SINE MIR 38 141 -67 390 269 126 46 chr17 56884599 56884774 -28553706 - MIR SINE MIR -14 248 60 708 121 0 0 chr17 56885311 56885410 -28553070 - AluJb SINE Alu -10 302 204 2400 60 3 0 chr17 56885441 56885743 -28552737 + AluSp SINE Alu 1 303 -10 338 211 26 35 chr17 56886548 56886662 -28551818 + (CGG)n Simple_repeat Simple_repeat 3 115 0 268 126 0 0 chr17 56887236 56887283 -28551197 + MIR SINE MIR 106 151 -61 323 297 54 27 chr17 56888034 56888145 -28550335 + MIR SINE MIR 32 145 -63 936 102 0 29 chr17 56888165 56888302 -28550178 + AluJo/FLAM SINE Alu 1 133 -169 2148 81 60 0 chr17 56888302 56888587 -28549893 + AluSx SINE Alu 1 302 -10 350 273 70 31 chr17 56888637 56888765 -28549715 - MIR SINE MIR -81 181 49 23 78 0 0 chr17 56889483 56889534 -28548946 + GC_rich Low_complexity Low_complexity 1 51 0 278 257 43 0 chr17 56890783 56890853 -28547627 + MIR SINE MIR 81 153 -55 192 292 42 14 chr17 56890912 56890984 -28547496 + MIR SINE MIR 77 150 -112 2093 116 0 7 chr17 56891577 56891893 -28546587 + AluSx SINE Alu 1 312 0 778 140 0 0 chr17 56891896 56892010 -28546470 + AluJo/FRAM SINE Alu 177 290 -22 347 260 40 0 chr17 56892010 56892110 -28546370 - MIR SINE MIR -96 166 63 253 120 18 34 chr17 56892127 56892189 -28546291 - MLT1B LTR MaLR -9 496 398 2163 92 4 0 chr17 56892206 56892512 -28545968 - AluSq SINE Alu 0 307 1 858 126 0 44 chr17 56892522 56892657 -28545823 - FLAM_C SINE Alu 0 133 5 458 221 86 109 chr17 56892661 56892813 -28545667 - MLT1B LTR MaLR -54 336 182 2107 119 7 17 chr17 56892813 56893115 -28545365 - AluSx SINE Alu -13 299 1 2064 98 14 0 chr17 56893122 56893408 -28545072 - AluSx SINE Alu -22 290 1 458 221 86 109 chr17 56893408 56893586 -28544894 - MLT1B LTR MaLR -214 176 6 204 305 0 0 chr17 56893965 56894024 -28544456 - L3 LINE CR1 -113 1464 1406 235 200 0 0 chr17 56894803 56894848 -28543632 + (CCG)n Simple_repeat Simple_repeat 2 46 0 229 177 16 48 chr17 56894870 56894932 -28543548 + (CGGGG)n Simple_repeat Simple_repeat 5 64 0 2093 97 0 27 chr17 56895972 56896272 -28542208 + AluSq SINE Alu 1 292 -21 1488 199 35 0 chr17 56896920 56897207 -28541273 + AluJo SINE Alu 1 297 -15 2242 113 3 0 chr17 56897215 56897526 -28540954 + AluSq SINE Alu 1 312 -1 189 360 40 0 chr17 56897640 56897715 -28540765 + MIR3 SINE MIR 114 191 -17 928 129 8 0 chr17 56897732 56897864 -28540616 + FLAM_A SINE Alu 1 133 0 1997 112 0 0 chr17 56897995 56898271 -28540209 - AluSx SINE Alu -1 311 36 195 42 0 0 chr17 56898272 56898296 -28540184 + (A)n Simple_repeat Simple_repeat 1 24 0 2056 96 7 36 chr17 56898316 56898458 -28540022 + AluSx SINE Alu 1 146 -166 2086 101 20 3 chr17 56898458 56898755 -28539725 + AluSg SINE Alu 1 302 -8 2056 96 7 36 chr17 56898755 56898915 -28539565 + AluSx SINE Alu 146 294 -18 637 198 0 16 chr17 56898915 56899036 -28539444 - FLAM_A SINE Alu -14 119 1 197 318 0 0 chr17 56899039 56899102 -28539378 - MIR SINE MIR -114 148 86 2229 100 10 0 chr17 56899799 56900100 -28538380 + AluSx SINE Alu 1 304 -8 263 211 200 42 chr17 56900100 56900195 -28538285 - L2 LINE L2 -255 3017 2908 1473 152 4 9 chr17 56900223 56900454 -28538026 + AluJo SINE Alu 1 230 -82 1991 115 6 35 chr17 56900942 56901256 -28537224 + AluSq SINE Alu 1 305 -8 295 267 133 9 chr17 56901407 56901512 -28536968 - MIR SINE MIR -33 229 112 288 250 104 10 chr17 56901934 56902030 -28536450 - L2 LINE L2 -214 3058 2954 30 27 0 0 chr17 56902625 56902662 -28535818 + GC_rich Low_complexity Low_complexity 1 37 0 306 304 0 0 chr17 56902798 56902890 -28535590 + CT-rich Low_complexity Low_complexity 1 92 0 2068 109 3 10 chr17 56903297 56903600 -28534880 + AluSx SINE Alu 1 301 -11 188 295 162 19 chr17 56904028 56904133 -28534347 - MIR SINE MIR -56 152 33 248 308 58 29 chr17 56904194 56904298 -28534182 + MIR SINE MIR 47 153 -109 1147 196 51 84 chr17 56904461 56904675 -28533805 - AluJo SINE Alu -1 301 99 1968 151 0 13 chr17 56904675 56904980 -28533500 + AluSx SINE Alu 2 302 -10 1147 196 51 84 chr17 56904980 56905076 -28533404 - AluJo SINE Alu -203 99 1 228 354 40 46 chr17 56905520 56905695 -28532785 + MIR SINE MIR 76 249 -13 184 237 0 0 chr17 56906270 56906308 -28532172 - MIR SINE MIR -108 154 117 180 152 0 0 chr17 56907230 56907263 -28531217 + (CTG)n Simple_repeat Simple_repeat 1 33 0 2033 123 7 0 chr17 56907962 56908255 -28530225 + AluSc SINE Alu 1 295 -14 1040 230 47 61 chr17 57008658 57008912 -28429568 + MER44D DNA MER2_type 1 257 -2234 1233 141 103 0 chr17 57008912 57009125 -28429355 + MER46A DNA MER2_type 2 236 0 1040 230 47 61 chr17 57009125 57009214 -28429266 + MER44D DNA MER2_type 257 609 0 198 156 0 0 chr17 57009245 57009290 -28429190 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 563 298 62 25 chr17 57010163 57010438 -28428042 - L2 LINE L2 -8 3305 3021 462 361 42 40 chr17 57011339 57011737 -28426743 + L2 LINE L2 2613 3010 -303 250 333 10 10 chr17 57013035 57013134 -28425346 - MIR3 SINE MIR -2 206 108 690 220 62 6 chr17 57013431 57013608 -28424872 + MER5A DNA MER1_type 2 188 -1 1381 107 15 0 chr17 57014091 57014288 -28424192 - L1PA10 LINE L1 -15 6153 5954 1763 199 50 18 chr17 57014730 57015166 -28423314 + MLT1C LTR MaLR 1 450 -17 278 381 108 11 chr17 57015460 57015841 -28422639 - MLT1K LTR MaLR -67 521 104 234 373 56 30 chr17 57016958 57017226 -28421254 - L2 LINE L2 -388 2926 2652 1101 157 3 95 chr17 57019844 57020138 -28418342 - L1MB8 LINE L1 0 6178 5912 244 328 50 8 chr17 57021616 57021735 -28416745 - L2 LINE L2 -2 3311 3188 2100 197 14 14 chr17 57022642 57023154 -28415326 + L1MB8 LINE L1 4743 5254 -892 1448 217 22 56 chr17 57023160 57023520 -28414960 - MLT1A1 LTR MaLR -17 348 1 3757 181 52 30 chr17 57023523 57024428 -28414052 + L1MB8 LINE L1 5254 6178 0 436 279 102 30 chr17 57024440 57024637 -28413843 - MIR SINE MIR -3 259 49 1817 96 43 3 chr17 57024810 57025092 -28413388 + AluSp SINE Alu 19 311 -2 447 19 0 0 chr17 57025866 57025918 -28412562 + (TG)n Simple_repeat Simple_repeat 2 53 0 290 253 66 33 chr17 57025994 57026085 -28412395 + MIR3 SINE MIR 109 202 -6 289 311 96 48 chr17 57026249 57026561 -28411919 - L2 LINE L2 -11 3302 2976 275 355 45 0 chr17 57026725 57026835 -28411645 - L3 LINE CR1 -3 1574 1460 507 252 16 8 chr17 57026924 57027051 -28411429 + L2 LINE L2 3182 3309 -4 491 327 137 5 chr17 57027053 57027258 -28411222 - L3 LINE CR1 -210 1367 1136 1430 162 60 39 chr17 57027287 57027620 -28410860 + THE1C LTR MaLR 1 340 -35 896 189 24 122 chr17 57027638 57027892 -28410588 - MLT2D LTR ERVL -118 296 80 1916 132 44 7 chr17 57027892 57028188 -28410292 - AluSg SINE Alu -3 307 1 896 189 24 122 chr17 57028188 57028261 -28410219 - MLT2D LTR ERVL -334 80 1 230 263 48 48 chr17 57029048 57029234 -28409246 + L1ME LINE L1 707 892 -5178 284 186 0 17 chr17 57029252 57029311 -28409169 + L1M4 LINE L1 3510 3567 -2579 2229 115 3 6 chr17 57029320 57029632 -28408848 + AluSq SINE Alu 1 311 -2 402 233 33 33 chr17 57030891 57030981 -28407499 - L2 LINE L2 -37 3276 3187 434 297 55 28 chr17 57033843 57033988 -28404492 - MIR SINE MIR -80 182 34 378 264 92 46 chr17 57034528 57034702 -28403778 + MLT1J2 LTR MaLR 73 254 -196 1051 240 113 43 chr17 57034914 57035402 -28403078 + MLT1H LTR MaLR 18 539 -10 596 224 51 30 chr17 57035733 57035970 -28402510 + L1M4 LINE L1 3627 3868 -2278 21 71 0 0 chr17 57035983 57036025 -28402455 + AT_rich Low_complexity Low_complexity 1 42 0 585 198 9 0 chr17 57036106 57036222 -28402258 - ORSL DNA AcHobo -157 118 2 253 193 0 35 chr17 57036289 57036346 -28402134 + MIR SINE MIR 123 177 -85 213 245 20 0 chr17 57037028 57037077 -28401403 - MER5B DNA MER1_type -125 53 4 235 301 0 0 chr17 57038094 57038197 -28400283 - L1ME LINE L1 -286 5884 5782 384 288 91 43 chr17 57038568 57038778 -28399702 - L1ME LINE L1 -387 5783 5584 1722 192 10 47 chr17 57038778 57039163 -28399317 + MLT1A2 LTR MaLR 4 374 0 384 288 91 43 chr17 57039163 57039404 -28399076 - L1ME LINE L1 -586 5584 5289 25 51 0 0 chr17 57039429 57039468 -28399012 + AT_rich Low_complexity Low_complexity 1 39 0 348 209 45 28 chr17 57039470 57039647 -28398833 + (TA)n Simple_repeat Simple_repeat 1 180 0 23 78 0 0 chr17 57039720 57039771 -28398709 + AT_rich Low_complexity Low_complexity 1 51 0 1049 261 155 37 chr17 57039923 57040730 -28397750 - L1ME3A LINE L1 -14 6156 5255 187 250 35 12 chr17 57040739 57040911 -28397569 + (TA)n Simple_repeat Simple_repeat 2 177 0 207 0 0 0 chr17 57040918 57040941 -28397539 + (TG)n Simple_repeat Simple_repeat 2 24 0 986 265 122 40 chr17 57041091 57041379 -28397101 - L1ME3A LINE L1 -13 6157 5894 1975 188 11 3 chr17 57041379 57041741 -28396739 - MLT1A1 LTR MaLR 0 365 1 986 265 122 40 chr17 57041741 57042026 -28396454 - L1ME3A LINE L1 -276 5894 5537 233 317 10 30 chr17 57042048 57042149 -28396331 + MLT1H LTR MaLR 432 530 -19 642 273 56 65 chr17 57042179 57042835 -28395645 - L1ME3A LINE L1 -2323 3823 3174 934 244 20 26 chr17 57043058 57043367 -28395113 - MER114 LTR ERV -273 375 67 1777 156 19 49 chr17 57043367 57043431 -28395049 - L1MA9 LINE L1 0 6312 6248 2266 103 3 3 chr17 57043431 57043732 -28394748 + AluSg SINE Alu 1 301 -9 1777 156 19 49 chr17 57043732 57044077 -28394403 - L1MA9 LINE L1 -64 6248 5915 934 244 20 26 chr17 57044077 57044111 -28394369 - MER114 LTR ERV -581 67 34 283 221 29 19 chr17 57044111 57044215 -28394265 - L1ME3A LINE L1 -1203 4943 4839 2231 109 3 0 chr17 57044224 57044535 -28393945 - AluSx SINE Alu 0 312 1 1070 219 55 43 chr17 57044566 57045058 -28393422 - L1ME3A LINE L1 -1423 4723 4226 258 32 0 0 chr17 57045077 57045108 -28393372 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 234 261 29 0 chr17 57045108 57045177 -28393303 - L1ME3A LINE L1 -1995 4151 4081 610 285 12 4 chr17 57045210 57045487 -28392993 + L1ME LINE L1 4969 5249 -897 22161 86 7 16 chr17 57045552 57048895 -28389585 + L1PA6 LINE L1 883 4223 -2238 6977 61 1 9 chr17 57048901 57050091 -28388389 + L1PA6 LINE L1 5281 6464 -5 953 219 102 7 chr17 57050093 57050376 -28388104 + L1ME LINE L1 5326 5635 -527 636 307 5 0 chr17 57050449 57050638 -28387842 + HERVL LTR ERVL 4626 4815 -839 476 216 45 22 chr17 57051032 57051166 -28387314 + LTR45 LTR ERV1 389 525 0 714 288 42 0 chr17 57051173 57051388 -28387092 + HERVL LTR ERVL 4880 5103 -661 265 312 48 12 chr17 57052048 57052298 -28386182 - L1ME3A LINE L1 -3102 3044 2786 1307 116 6 0 chr17 57052562 57052743 -28385737 + AluSc SINE Alu 114 295 -14 234 0 0 0 chr17 57053189 57053215 -28385265 + (T)n Simple_repeat Simple_repeat 1 26 0 250 86 0 0 chr17 57053241 57053276 -28385204 - Charlie8 DNA MER1_type -1000 1417 1383 346 258 68 85 chr17 57053335 57053734 -28384746 + HAL1b LINE L1 464 855 -493 230 274 38 38 chr17 57053967 57054073 -28384407 + HAL1b LINE L1 1197 1302 -46 1349 237 22 3 chr17 57055436 57055757 -28382723 - MER58B DNA MER1_type 0 341 15 370 239 75 109 chr17 57055983 57056222 -28382258 - L3 LINE CR1 -124 1453 1223 423 298 62 31 chr17 57056802 57056963 -28381517 + MIR SINE MIR 4 169 -93 401 272 173 16 chr17 57057481 57057672 -28380808 - MIR SINE MIR -5 257 37 871 234 37 40 chr17 57058061 57058334 -28380146 + MLT1C LTR MaLR 53 324 -143 23 33 0 0 chr17 57058443 57058473 -28380007 + AT_rich Low_complexity Low_complexity 1 30 0 233 248 99 12 chr17 57058531 57058692 -28379788 + L1ME4a LINE L1 5943 6117 -4 320 302 76 23 chr17 57059423 57059595 -28378885 + L3 LINE CR1 1286 1466 -111 257 375 42 46 chr17 57059654 57059773 -28378707 + L2 LINE L2 2369 2487 -827 1711 229 8 0 chr17 57059773 57060135 -28378345 + MLT1A1 LTR MaLR 1 365 0 257 375 42 46 chr17 57060135 57060322 -28378158 + L2 LINE L2 2487 2674 -640 225 125 25 0 chr17 57060365 57060405 -28378075 + L2 LINE L2 3273 3313 0 927 230 0 0 chr17 57060597 57060784 -28377696 - MER5A DNA MER1_type -1 188 2 210 71 0 0 chr17 57060972 57061000 -28377480 + (T)n Simple_repeat Simple_repeat 1 28 0 542 314 57 0 chr17 57061132 57061312 -28377168 + MIR SINE MIR 45 234 -28 1973 128 6 29 chr17 57061916 57062259 -28376221 + THE1B LTR MaLR 1 335 -29 382 274 44 9 chr17 57062272 57062385 -28376095 + L1MCa LINE L1 2253 2404 -4057 656 279 78 8 chr17 57062635 57063043 -28375437 + L1MCa LINE L1 2413 2807 -3619 1961 243 178 19 chr17 57063043 57063689 -28374791 - L1M4b LINE L1 -5781 1078 330 2347 172 12 21 chr17 57063690 57064120 -28374360 - MSTB LTR MaLR 0 426 1 813 101 0 0 chr17 57064120 57064239 -28374241 - MSTB-int LTR MaLR 0 1651 1533 636 62 0 0 chr17 57064241 57064321 -28374159 + AluY SINE Alu 1 80 -230 5384 193 13 8 chr17 57064436 57065412 -28373068 - MSTB-int LTR MaLR -113 1538 554 2229 120 3 0 chr17 57065412 57065713 -28372767 - AluSq SINE Alu -11 302 1 5384 193 13 8 chr17 57065713 57065787 -28372693 - MSTB-int LTR MaLR -1097 554 482 333 43 0 0 chr17 57065800 57065846 -28372634 - MADE1 DNA Mariner -34 46 1 639 81 0 0 chr17 57065846 57065932 -28372548 - MSTA LTR MaLR -53 375 290 471 202 35 0 chr17 57065936 57066050 -28372430 - L1M4b LINE L1 -6646 213 96 192 125 0 0 chr17 57066052 57066084 -28372396 + (TAGA)n Simple_repeat Simple_repeat 3 34 0 394 269 141 0 chr17 57067381 57067530 -28370950 - MER58C DNA MER1_type 0 215 46 213 383 35 26 chr17 57067534 57067649 -28370831 - MIR3 SINE MIR -41 167 52 655 167 14 21 chr17 57067930 57068074 -28370406 + MLT1E3 LTR MaLR 482 624 0 1654 169 37 0 chr17 57068276 57068549 -28369931 + AluJo SINE Alu 19 301 -11 219 160 20 40 chr17 57068549 57068590 -28369890 + GA-rich Low_complexity Low_complexity 9 50 0 449 305 121 42 chr17 57068648 57069046 -28369434 - L1ME4a LINE L1 -58 6063 5643 4092 161 34 80 chr17 57069608 57069695 -28368785 - L1MD1 LINE L1 -1 6241 6152 2191 92 0 51 chr17 57069695 57070011 -28368469 - AluSc SINE Alu -9 300 1 4092 161 34 80 chr17 57070011 57070979 -28367501 - L1MD1 LINE L1 -90 6152 5241 2598 111 11 3 chr17 57070979 57071350 -28367130 - THE1C LTR MaLR 0 375 2 4092 161 34 80 chr17 57071350 57071392 -28367088 - L1MD1 LINE L1 -1001 5241 5199 5342 248 30 46 chr17 57071441 57072412 -28366068 - L1ME4a LINE L1 -771 5375 4390 8919 34 0 10 chr17 57072412 57074265 -28364215 + L1PA4 LINE L1 4310 6154 -1 5342 248 30 46 chr17 57074265 57075577 -28362903 - L1ME4a LINE L1 -1756 4390 3129 4222 169 6 4 chr17 57075625 57076329 -28362151 - MER44D DNA MER2_type 0 705 1 2533 69 0 0 chr17 57076351 57076657 -28361823 + AluY SINE Alu 1 306 -5 2361 137 60 21 chr17 57076658 57076764 -28361716 - L1MA9 LINE L1 -33 6279 6179 225 0 0 0 chr17 57076764 57076789 -28361691 + (TG)n Simple_repeat Simple_repeat 2 26 0 2361 137 60 21 chr17 57076789 57077148 -28361332 - L1MA9 LINE L1 -133 6179 5796 186 71 0 0 chr17 57077148 57077176 -28361304 + (TC)n Simple_repeat Simple_repeat 1 28 0 201 39 0 0 chr17 57077176 57077202 -28361278 + (TG)n Simple_repeat Simple_repeat 2 27 0 326 259 176 23 chr17 57077264 57077395 -28361085 + MIR SINE MIR 63 213 -49 458 179 12 0 chr17 57077402 57077486 -28360994 + Tigger4(Zombi) DNA MER2_type 1 85 -2646 * 2751 123 2 11 chr17 57077467 57077924 -28360556 + Tigger4(Zombi) DNA MER2_type 2279 2731 0 870 246 128 48 chr17 57078698 57078890 -28359590 - L2 LINE L2 -6 3307 3132 2231 110 3 0 chr17 57078890 57079190 -28359290 + AluSg1 SINE Alu 1 301 -8 870 246 128 48 chr17 57079190 57079350 -28359130 - L2 LINE L2 -181 3132 2926 569 315 90 6 chr17 57079350 57079528 -28358952 + MER91A DNA MER1_type 1 193 -3 2709 237 43 19 chr17 57079792 57080588 -28357892 - L1ME2 LINE L1 -16 6148 5334 269 301 54 56 chr17 57080597 57080724 -28357756 - MIR SINE MIR -64 144 34 360 234 39 0 chr17 57083176 57083253 -28355227 - MIR3 SINE MIR -10 198 119 27 0 0 0 chr17 57084131 57084158 -28354322 + AT_rich Low_complexity Low_complexity 1 27 0 213 318 32 63 chr17 57084439 57084565 -28353915 - L2 LINE L2 -8 3305 3184 23 68 0 0 chr17 57085921 57085965 -28352515 + AT_rich Low_complexity Low_complexity 1 44 0 458 265 236 0 chr17 57085974 57086179 -28352301 + MIR SINE MIR 2 250 -12 627 320 6 6 chr17 57087759 57087931 -28350549 - MIR3 SINE MIR -27 181 10 213 313 203 30 chr17 57088214 57088759 -28349721 + L2 LINE L2 2408 3051 -221 180 250 36 0 chr17 57089347 57089403 -28349077 + L2 LINE L2 2680 2737 -577 185 175 18 105 chr17 57089636 57089693 -28348787 + L3 LINE CR1 1511 1562 -15 646 323 63 76 chr17 57089766 57090227 -28348253 - L2 LINE L2 -11 3261 2807 279 79 0 0 chr17 57091278 57091316 -28347164 + (TG)n Simple_repeat Simple_repeat 1 38 0 393 329 63 70 chr17 57094682 57095236 -28343244 + L2 LINE L2 2297 2846 -468 196 381 50 14 chr17 57095330 57095469 -28343011 + L2 LINE L2 2907 3050 -222 507 261 211 0 chr17 57095567 57095728 -28342752 + MIR SINE MIR 12 206 -56 1622 218 29 6 chr17 57095742 57096090 -28342390 + MLT1A1 LTR MaLR 10 365 0 2124 146 22 19 chr17 57096136 57096499 -28341981 - THE1B LTR MaLR 0 364 1 566 216 9 26 chr17 57096610 57096726 -28341754 - MER81 DNA DNA 0 114 1 192 301 0 48 chr17 57096735 57096818 -28341662 + L2 LINE L2 3226 3304 -9 519 236 134 32 chr17 57097617 57097774 -28340706 + MIR SINE MIR 6 178 -84 1345 229 34 46 chr17 57098378 57098983 -28339497 - L1 LINE L1 -1068 5078 4467 234 91 0 0 chr17 57098983 57099016 -28339464 + (TA)n Simple_repeat Simple_repeat 1 33 0 1345 229 34 46 chr17 57099016 57099714 -28338766 - L1 LINE L1 -1679 4467 3631 31 44 0 0 chr17 57100040 57100085 -28338395 + AT_rich Low_complexity Low_complexity 1 45 0 539 269 29 25 chr17 57100096 57100338 -28338142 + L1ME1 LINE L1 5761 6003 -163 600 234 6 6 chr17 57100366 57100524 -28337956 + L1MA10 LINE L1 6169 6326 -8 579 297 19 64 chr17 57100529 57100795 -28337685 - MIR SINE MIR -1 261 8 19248 54 5 1 chr17 57100822 57103418 -28335062 - L1PA6 LINE L1 -1074 5072 2468 7129 41 6 0 chr17 57103419 57104467 -28334013 + L1PA6 LINE L1 5080 6141 -13 590 212 30 5 chr17 57105012 57105210 -28333270 - L1M4 LINE L1 -1600 5044 4842 16945 157 11 7 chr17 57105319 57109212 -28329268 - L1PA13 LINE L1 0 6163 2252 5835 203 88 38 chr17 57109225 57110898 -28327582 - L1M4 LINE L1 -4592 2054 270 6913 68 6 0 chr17 57110898 57112464 -28326016 - L1PA8 LINE L1 -6 6166 4594 5835 203 88 38 chr17 57112464 57112742 -28325738 - L1M4 LINE L1 -6376 270 7 290 327 43 15 chr17 57112910 57113042 -28325438 + MIR SINE MIR 33 167 -64 36 23 0 0 chr17 57113061 57113104 -28325376 + AT_rich Low_complexity Low_complexity 1 43 0 236 380 72 0 chr17 57113315 57113510 -28324970 - MIR SINE MIR -1 261 53 6169 87 40 0 chr17 57114436 57115420 -28323060 + L1PA11 LINE L1 5152 6174 0 408 205 16 16 chr17 57115674 57115801 -28322679 + L1MA5 LINE L1 6174 6300 0 585 297 0 26 chr17 57116542 57116697 -28321783 + MIR3 SINE MIR 52 202 -6 218 319 0 0 chr17 57117417 57117489 -28320991 + GA-rich Low_complexity Low_complexity 1 72 0 212 304 125 36 chr17 57118815 57118983 -28319497 - L2 LINE L2 -576 2738 2556 252 309 0 10 chr17 57119124 57119221 -28319259 - MER103 DNA DNA -63 103 8 1853 152 14 10 chr17 57119256 57119552 -28318928 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 57120427 57120455 -28318025 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 628 248 84 42 chr17 57120461 57120675 -28317805 - L2 LINE L2 -34 3279 3057 1253 146 18 9 chr17 57120678 57121009 -28317471 - L1MA7 LINE L1 -265 6026 5595 1258 158 16 20 chr17 57121010 57121264 -28317216 + L1MA6 LINE L1 6043 6295 -5 1101 289 53 32 chr17 57121273 57121791 -28316689 - L2 LINE L2 -247 3066 2539 1601 154 20 20 chr17 57121791 57122089 -28316391 - L1MB7 LINE L1 -9 6175 5878 1101 289 53 32 chr17 57122089 57122123 -28316357 - L2 LINE L2 -774 2539 2507 517 171 0 0 chr17 57122188 57122276 -28316204 - MIR SINE MIR -21 241 154 424 288 51 29 chr17 57123298 57123482 -28314998 - MIR SINE MIR -62 146 3 404 361 25 6 chr17 57123865 57124023 -28314457 - MIR SINE MIR -54 208 48 203 256 0 0 chr17 57125108 57125151 -28313329 + L2 LINE L2 3221 3263 -9 1428 224 69 11 chr17 57125753 57126128 -28312352 + MARNA DNA Mariner 2 398 -188 779 254 151 52 chr17 57126223 57126628 -28311852 + L2 LINE L2 2865 3309 -4 448 168 89 0 chr17 57126824 57126925 -28311555 - L1MA9 LINE L1 -22 6290 6181 1230 157 22 0 chr17 57126928 57127191 -28311289 - L1MA9 LINE L1 -108 6081 5812 524 222 63 8 chr17 57127474 57127600 -28310880 + MIR SINE MIR 32 164 -98 1397 217 127 56 chr17 57127600 57128103 -28310377 - MLT1F LTR MaLR 0 542 4 342 214 10 51 chr17 57128341 57128439 -28310041 + MER3 DNA MER1_type 37 130 -79 5041 159 19 29 chr17 57128439 57128944 -28309536 + L1MA7 LINE L1 4815 5324 -967 2124 101 0 47 chr17 57128944 57129261 -28309219 + AluSc SINE Alu 1 302 -7 5041 159 19 29 chr17 57129261 57130244 -28308236 + L1MA7 LINE L1 5324 6291 0 991 194 38 0 chr17 57130258 57130521 -28307959 + MER33 DNA MER1_type 52 324 0 244 304 68 43 chr17 57131430 57131591 -28306889 - MIR SINE MIR -48 214 50 5952 142 45 65 chr17 57131629 57132885 -28305595 + Tigger3b DNA MER2_type 1 1231 0 315 250 260 21 chr17 57132885 57133068 -28305412 + L3 LINE CR1 1340 1572 -5 21 36 0 0 chr17 57133213 57133241 -28305239 + AT_rich Low_complexity Low_complexity 1 28 0 359 269 0 0 chr17 57133997 57134064 -28304416 + MIR3 SINE MIR 88 154 -54 2412 86 0 0 chr17 57134292 57134595 -28303885 - AluSx SINE Alu -9 303 1 203 200 0 0 chr17 57137273 57137308 -28301172 + A-rich Low_complexity Low_complexity 1 35 0 204 369 57 25 chr17 57140080 57140202 -28298278 + MIR SINE MIR 20 145 -63 695 294 31 5 chr17 57141772 57141966 -28296514 - MIR SINE MIR -1 261 63 22 35 0 0 chr17 57144528 57144557 -28293923 + AT_rich Low_complexity Low_complexity 1 29 0 2437 77 0 3 chr17 57145132 57145432 -28293048 + AluY SINE Alu 1 299 -12 314 251 186 54 chr17 57145680 57145847 -28292633 - L1MC/D LINE L1 -1993 5815 5627 272 316 91 4 chr17 57145847 57146100 -28292380 - L1MC/D LINE L1 -1311 4835 4561 37217 37 3 8 chr17 57146317 57152497 -28285983 + L1PA3 LINE L1 8 6152 -3 264 277 0 30 chr17 57152788 57152889 -28285591 - L1MC/D LINE L1 -2098 4048 3951 278 293 48 40 chr17 57153135 57153507 -28284973 - L1MC/D LINE L1 -2967 3179 2805 378 264 138 43 chr17 57153997 57154142 -28284338 - HAL1 LINE L1 -49 2458 2328 1960 128 52 30 chr17 57154142 57154447 -28284033 - AluSx SINE Alu 0 312 1 378 264 138 43 chr17 57154447 57154650 -28283830 - HAL1 LINE L1 -179 2328 2077 2789 161 47 22 chr17 57154838 57155417 -28283063 + L1MD1 LINE L1 5407 5999 -243 205 311 0 0 chr17 57155807 57155852 -28282628 + L2 LINE L2 3150 3194 -78 303 331 138 11 chr17 57155853 57156034 -28282446 + L2 LINE L2 2848 3051 -221 6124 64 1 0 chr17 57156045 57156861 -28281619 - L1PA8 LINE L1 0 6172 5356 22 0 0 0 chr17 57157036 57157058 -28281422 + AT_rich Low_complexity Low_complexity 1 22 0 248 232 274 21 chr17 57157131 57157226 -28281254 + MER5B DNA MER1_type 1 119 -59 316 279 0 0 chr17 57157226 57157305 -28281175 + L1MC4 LINE L1 6624 6702 -1340 387 0 0 0 chr17 57157326 57157384 -28281096 + (TG)n Simple_repeat Simple_repeat 1 101 0 387 0 0 0 chr17 57157384 57157427 -28281053 + (TG)n Simple_repeat Simple_repeat 2 44 0 2078 88 0 7 chr17 57157467 57157741 -28280739 - AluSg1 SINE Alu -37 272 1 280 369 90 9 chr17 57157817 57157928 -28280552 + L2 LINE L2 3134 3253 -19 474 248 57 14 chr17 57157934 57158075 -28280405 - L2 LINE L2 0 3313 3167 * 725 297 59 8 chr17 57158057 57158296 -28280184 - MIR SINE MIR 0 262 12 225 360 44 7 chr17 57158402 57158538 -28279942 - L3 LINE CR1 -41 1536 1396 465 223 122 80 chr17 57158926 57159114 -28279366 - L3 LINE CR1 -227 1350 1155 216 97 0 0 chr17 57159750 57159781 -28278699 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 419 277 8 54 chr17 57159785 57159915 -28278565 - L2 LINE L2 -6 3266 3143 427 323 32 0 chr17 57159947 57160071 -28278409 - L2 LINE L2 -7 3306 3179 599 290 16 0 chr17 57161133 57161319 -28277161 - LTR33 LTR ERVL 0 521 333 393 192 10 30 chr17 57161391 57161490 -28276990 - LTR33 LTR ERVL -380 141 45 2121 121 3 0 chr17 57161582 57161879 -28276601 + AluSx SINE Alu 1 298 -14 268 24 24 24 chr17 57162034 57162076 -28276404 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 2152 116 3 3 chr17 57162182 57162476 -28276004 + AluSx SINE Alu 1 294 -18 28 0 0 0 chr17 57162595 57162623 -28275857 + AT_rich Low_complexity Low_complexity 1 28 0 770 309 49 4 chr17 57162633 57162879 -28275601 - MIR SINE MIR 0 262 6 55 40 0 0 chr17 57163048 57163124 -28275356 + AT_rich Low_complexity Low_complexity 1 76 0 460 308 28 7 chr17 57163777 57163920 -28274560 + MIR3 SINE MIR 15 160 -48 444 281 46 33 chr17 57164118 57164271 -28274209 + L2 LINE L2 3159 3313 0 381 276 58 39 chr17 57164404 57164560 -28273920 + MIR3 SINE MIR 49 207 -1 193 268 134 24 chr17 57164720 57164802 -28273678 + MIR SINE MIR 26 116 -92 24 0 0 0 chr17 57165247 57165271 -28273209 + AT_rich Low_complexity Low_complexity 1 24 0 13219 191 39 9 chr17 57165500 57165859 -28272621 - L1PB1 LINE L1 0 6867 6520 258 32 0 0 chr17 57165859 57165890 -28272590 + (TA)n Simple_repeat Simple_repeat 1 31 0 13219 191 39 9 chr17 57165890 57165920 -28272560 - L1PB1 LINE L1 -347 6520 6492 229 19 19 74 chr17 57165920 57165974 -28272506 + (TA)n Simple_repeat Simple_repeat 1 51 0 13219 191 39 9 chr17 57165974 57167341 -28271139 - L1PB1 LINE L1 -375 6492 5167 771 92 0 0 chr17 57167341 57167450 -28271030 + (TATTG)n Simple_repeat Simple_repeat 3 111 0 13219 191 39 9 chr17 57167450 57168674 -28269806 - L1PB1 LINE L1 -1700 5167 3981 249 57 0 0 chr17 57168674 57168709 -28269771 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 13219 191 39 9 chr17 57168709 57171154 -28267326 - L1PB1 LINE L1 -2886 3981 1297 1351 254 66 52 chr17 57171240 57171834 -28266646 + L1MC4a LINE L1 5327 5928 -1880 786 248 93 4 chr17 57173300 57173526 -28264954 - MIR SINE MIR 0 262 17 22 0 0 54 chr17 57173923 57173938 -28264542 + AT_rich Low_complexity Low_complexity 1 15 -20 2384 112 0 0 chr17 57173938 57174250 -28264230 - AluSx SINE Alu 0 312 1 22 0 0 54 chr17 57174250 57174271 -28264209 + AT_rich Low_complexity Low_complexity 15 35 0 2426 90 0 0 chr17 57174941 57175240 -28263240 - AluSq SINE Alu -14 299 1 841 209 23 0 chr17 57175344 57175521 -28262959 + L1MDa LINE L1 21 201 -6339 392 211 111 0 chr17 57175839 57175929 -28262551 + MIR SINE MIR 47 146 -116 30 0 0 0 chr17 57175975 57176005 -28262475 + AT_rich Low_complexity Low_complexity 1 30 0 2015 74 34 71 chr17 57176113 57176410 -28262070 - AluSc SINE Alu -23 286 1 1514 131 31 81 chr17 57176418 57176778 -28261702 - L1MA7 LINE L1 -2 6289 5948 7187 174 44 11 chr17 57176778 57178364 -28260116 - L1 LINE L1 -1234 4736 3098 1940 165 36 32 chr17 57178368 57178910 -28259570 + MLT2A2 LTR ERVL 1 547 -7 663 224 78 14 chr17 57178914 57179133 -28259347 - L1 LINE L1 -2875 3095 2863 4805 157 4 15 chr17 57179146 57179738 -28258742 - L1P LINE L1 -1701 4445 3865 1616 102 165 12 chr17 57179738 57179993 -28258487 - AluSg1 SINE Alu -15 294 1 4805 157 4 15 chr17 57179993 57180312 -28258168 - L1P LINE L1 -2281 3865 3544 * 8873 131 17 25 chr17 57180301 57180753 -28257727 + L1MA2 LINE L1 3539 3993 -2311 1728 197 3 3 chr17 57180753 57181052 -28257428 + AluJb SINE Alu 1 299 -13 8873 131 17 25 chr17 57181052 57183383 -28255097 + L1MA2 LINE L1 3993 6300 -4 533 309 48 24 chr17 57183513 57183808 -28254672 - L1 LINE L1 -5589 302 1 681 248 26 7 chr17 57184645 57184798 -28253682 - MIR3 SINE MIR -41 167 12 2338 91 0 3 chr17 57185215 57185513 -28252967 + AluSq SINE Alu 1 297 -16 1415 163 40 92 chr17 57185527 57185852 -28252628 + AluJo SINE Alu 1 308 -4 234 356 45 45 chr17 57185946 57186148 -28252332 + L2 LINE L2 2776 2977 -337 228 254 17 0 chr17 57186163 57186222 -28252258 + (TGAA)n Simple_repeat Simple_repeat 2 61 0 2585 38 0 25 chr17 57186704 57187023 -28251457 - AluY SINE Alu 0 311 1 429 188 0 0 chr17 57188451 57188536 -28249944 + (CA)n Simple_repeat Simple_repeat 1 85 0 190 273 156 13 chr17 57189647 57189724 -28248756 + L2 LINE L2 2949 3036 -236 327 279 170 20 chr17 57190358 57190505 -28247975 + MIR SINE MIR 24 192 -70 478 334 97 48 chr17 57191351 57191979 -28246501 + L2 LINE L2 2595 3264 -8 267 226 0 0 chr17 57192391 57192444 -28246036 - L2 LINE L2 0 3313 3261 577 260 19 47 chr17 57193789 57193961 -28244519 + MIR SINE MIR 28 195 -60 2411 95 0 3 chr17 57193966 57194271 -28244209 + AluSq SINE Alu 1 304 -9 2191 121 3 7 chr17 57194470 57194777 -28243703 - AluSx SINE Alu -6 306 1 302 283 261 0 chr17 57195051 57195235 -28243245 - L2 LINE L2 -4 3309 3078 595 196 158 1 chr17 57195368 57195631 -28242849 - MER58B DNA MER1_type 0 341 1 437 347 42 56 chr17 57195631 57195916 -28242564 - L2 LINE L2 -514 2800 2520 1249 163 158 53 chr17 57196223 57196516 -28241964 + L1MA9 LINE L1 5831 6178 -134 342 0 0 0 chr17 57196516 57196554 -28241926 + (CA)n Simple_repeat Simple_repeat 1 38 0 1249 163 158 53 chr17 57196554 57196658 -28241822 + L1MA9 LINE L1 6178 6270 -42 676 319 61 58 chr17 57196698 57197183 -28241297 - L2 LINE L2 -3 3269 2782 22 56 0 0 chr17 57198403 57198439 -28240041 + AT_rich Low_complexity Low_complexity 1 36 0 262 231 0 15 chr17 57198956 57199021 -28239459 + MER63C DNA MER1_type 1 64 -866 1729 181 54 60 chr17 57199067 57199458 -28239022 + MER63C DNA MER1_type 60 452 -608 203 86 0 29 chr17 57199458 57199493 -28238987 + (TA)n Simple_repeat Simple_repeat 2 35 0 2490 86 6 8 chr17 57199494 57199853 -28238627 + L1PB1 LINE L1 5794 6151 0 1729 181 54 60 chr17 57199853 57199924 -28238556 + MER63C DNA MER1_type 451 521 -409 863 105 0 0 chr17 57199949 57200063 -28238417 + AluSg/x SINE Alu 181 294 -18 207 188 0 0 chr17 57200394 57200442 -28238038 + GA-rich Low_complexity Low_complexity 2 49 0 396 322 63 60 chr17 57201249 57201581 -28236899 - L2 LINE L2 -8 3264 2932 2173 110 0 41 chr17 57202557 57202874 -28235606 + AluSq SINE Alu 1 304 -9 195 100 0 0 chr17 57203775 57203805 -28234675 + (CATATA)n Simple_repeat Simple_repeat 4 33 0 306 0 0 0 chr17 57203989 57204023 -28234457 + (TG)n Simple_repeat Simple_repeat 2 35 0 906 181 7 0 chr17 57204583 57204732 -28233748 - AluJb SINE Alu -19 293 144 219 167 0 0 chr17 57205945 57205987 -28232493 + (CA)n Simple_repeat Simple_repeat 1 42 0 335 255 16 38 chr17 57208228 57208397 -28230083 + L1MC4a LINE L1 5689 5818 -303 292 273 18 27 chr17 57208437 57208547 -28229933 + HAL1 LINE L1 2366 2474 -33 245 304 20 29 chr17 57209124 57209226 -28229254 + MIR SINE MIR 8 108 -154 1046 139 0 46 chr17 57209226 57209399 -28229081 + FRAM SINE Alu 1 164 -12 377 296 26 7 chr17 57209909 57210061 -28228419 + L1ME LINE L1 5525 5679 -442 206 311 56 11 chr17 57210451 57210541 -28227939 - MIR SINE MIR -1 261 168 454 303 14 14 chr17 57210612 57210754 -28227726 - MIR SINE MIR -10 252 111 223 284 45 45 chr17 57210781 57210869 -28227611 - MIR SINE MIR -137 125 38 21 36 0 0 chr17 57211726 57211754 -28226726 + AT_rich Low_complexity Low_complexity 1 28 0 2153 99 3 3 chr17 57212660 57212942 -28225538 + AluSx SINE Alu 23 304 -8 2074 151 0 6 chr17 57212954 57213265 -28225215 + AluSx SINE Alu 1 309 -3 193 273 0 0 chr17 57213265 57213309 -28225171 - MIR SINE MIR -117 145 102 198 279 66 16 chr17 57213480 57213541 -28224939 + MIR SINE MIR 24 87 -121 616 351 38 4 chr17 57213723 57213962 -28224518 - MIR SINE MIR -11 251 5 192 158 0 0 chr17 57215375 57215413 -28223067 + CT-rich Low_complexity Low_complexity 3 40 0 250 309 10 31 chr17 57215699 57215796 -28222684 - MIR SINE MIR -151 111 17 721 142 0 47 chr17 57216169 57216296 -28222184 + FRAM SINE Alu 54 174 -2 386 241 110 7 chr17 57217138 57217283 -28221197 - MER103 DNA DNA -1 165 6 36 23 0 0 chr17 57217459 57217502 -28220978 + AT_rich Low_complexity Low_complexity 1 43 0 536 283 38 38 chr17 57217577 57217761 -28220719 + MIR SINE MIR 53 236 -26 400 290 243 22 chr17 57218405 57218722 -28219758 - MLT1I LTR MaLR 0 409 23 207 176 0 39 chr17 57218765 57218816 -28219664 + T-rich Low_complexity Low_complexity 6 54 0 773 223 26 42 chr17 57218842 57219035 -28219445 + MIR SINE MIR 31 220 -42 5242 265 91 30 chr17 57219049 57221347 -28217133 - HAL1 LINE L1 -69 2438 1 272 170 0 19 chr17 57221816 57221869 -28216611 + L2 LINE L2 3262 3313 0 271 304 78 0 chr17 57221865 57221967 -28216513 + MIR SINE MIR 56 165 -97 * 269 250 125 25 chr17 57222015 57222135 -28216345 + L1ME4a LINE L1 5989 6120 -1 2339 79 20 0 chr17 57222407 57222711 -28215769 - AluSg SINE Alu 0 310 1 224 229 0 66 chr17 57223506 57223567 -28214913 + MIR3 SINE MIR 146 202 -6 414 276 145 7 chr17 57224245 57224390 -28214090 + MIR3 SINE MIR 32 196 -12 2048 124 0 0 chr17 57225143 57225426 -28213054 - AluSx SINE Alu -29 283 1 765 305 171 47 chr17 57225829 57226218 -28212262 + L2 LINE L2 902 1241 -2073 1527 177 12 0 chr17 57226218 57226497 -28211983 + AluJb SINE Alu 30 311 0 765 305 171 47 chr17 57226497 57226993 -28211487 + L2 LINE L2 1241 1899 -1415 235 196 125 0 chr17 57226998 57227054 -28211426 + MER69 DNA AcHobo 1 63 -2463 558 168 24 8 chr17 57227214 57227339 -28211141 + MER69 DNA AcHobo 2393 2519 -7 731 293 73 57 chr17 57227367 57227828 -28210652 + L2 LINE L2 1961 3272 0 2339 90 3 0 chr17 57228328 57228629 -28209851 + AluSp SINE Alu 1 302 -11 262 267 140 63 chr17 57228761 57228982 -28209498 + L2 LINE L2 2605 2842 -472 747 299 23 9 chr17 57229141 57229362 -28209118 - MIR SINE MIR -12 250 27 296 376 57 18 chr17 57230386 57230665 -28207815 - L2 LINE L2 -1 3271 2982 287 280 76 53 chr17 57230790 57230922 -28207558 - MIR SINE MIR -83 179 45 468 241 54 60 chr17 57230940 57231106 -28207374 - MER63A DNA MER1_type 0 210 46 219 288 0 17 chr17 57231505 57231564 -28206916 - L3 LINE CR1 -1426 151 94 1908 126 16 45 chr17 57232840 57233150 -28205330 + AluSx SINE Alu 1 301 -11 183 246 0 0 chr17 57233254 57233311 -28205169 + (TG)n Simple_repeat Simple_repeat 2 58 0 361 320 4 69 chr17 57233315 57233413 -28205067 - MIR SINE MIR -50 212 109 2114 126 10 0 chr17 57233413 57233885 -28204595 + AluSx SINE Alu 1 475 0 361 320 4 69 chr17 57233885 57233926 -28204554 - MIR SINE MIR -153 109 67 528 220 33 66 chr17 57233926 57234108 -28204372 + MER69A DNA AcHobo 1 176 -1 361 320 4 69 chr17 57234108 57234191 -28204289 - MIR SINE MIR -195 67 6 196 203 43 58 chr17 57234329 57234398 -28204082 - MIR3 SINE MIR -135 73 6 229 305 0 0 chr17 57235230 57235289 -28203191 + C-rich Low_complexity Low_complexity 6 64 0 660 234 142 5 chr17 57235569 57235774 -28202706 + MIR SINE MIR 30 262 0 5020 86 19 9 chr17 57235805 57236502 -28201978 - L1PA10 LINE L1 -3 6165 5462 1850 106 0 56 chr17 57236912 57237196 -28201284 + AluSc SINE Alu 33 300 -9 345 195 0 46 chr17 57237196 57237283 -28201197 + L1MD2 LINE L1 6274 6356 -3 449 305 121 42 chr17 57237845 57238243 -28200237 + L1ME4a LINE L1 5643 6063 -58 1654 169 37 0 chr17 57238301 57238615 -28199865 - AluJo SINE Alu 0 342 19 425 232 39 155 chr17 57238629 57238836 -28199644 + MIR SINE MIR 20 202 -60 207 311 0 16 chr17 57239724 57239785 -28198695 - L3 LINE CR1 -99 1478 1419 180 0 0 0 chr17 57240987 57241007 -28197473 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 688 275 38 19 chr17 57241069 57241280 -28197200 - MIR SINE MIR 0 262 48 414 260 146 38 chr17 57242504 57242692 -28195788 - L1ME4a LINE L1 0 6121 5955 684 229 66 33 chr17 57242692 57242875 -28195605 - MER5A DNA MER1_type 0 189 1 414 260 146 38 chr17 57242875 57243028 -28195452 - L1ME4a LINE L1 -166 5955 5743 464 261 143 6 chr17 57243985 57244146 -28194334 - MIR SINE MIR -63 199 17 207 0 0 0 chr17 57244153 57244176 -28194304 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2262 112 0 0 chr17 57244178 57244474 -28194006 - AluSx SINE Alu -16 296 1 1678 174 91 8 chr17 57244875 57245236 -28193244 + MSTD LTR MaLR 6 396 0 765 183 50 39 chr17 57245323 57245503 -28192977 - MER5A DNA MER1_type -1 188 7 246 224 0 35 chr17 57247089 57247147 -28191333 - L2 LINE L2 -2 3311 3256 268 328 0 0 chr17 57247594 57247658 -28190822 + L2 LINE L2 3207 3270 -2 189 147 0 0 chr17 57247661 57247695 -28190785 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 282 309 41 32 chr17 57247708 57247831 -28190649 + L2 LINE L2 3190 3313 0 214 358 11 0 chr17 57250693 57250788 -28187692 + GA-rich Low_complexity Low_complexity 2 97 0 305 258 186 0 chr17 57250835 57250932 -28187548 + MIR SINE MIR 50 164 -98 198 360 45 0 chr17 57251911 57252022 -28186458 - L2 LINE L2 -1058 2256 2141 224 57 0 29 chr17 57252504 57252539 -28185941 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 319 257 228 12 chr17 57252542 57252713 -28185767 + L1MC4a LINE L1 5909 6116 -1692 24 0 0 0 chr17 57252797 57252821 -28185659 + AT_rich Low_complexity Low_complexity 1 24 0 502 339 60 9 chr17 57253392 57253610 -28184870 - MIR SINE MIR -32 230 2 404 219 61 61 chr17 57253682 57253796 -28184684 + MIR SINE MIR 77 190 -72 243 239 0 0 chr17 57253993 57254060 -28184420 + (TA)n Simple_repeat Simple_repeat 1 67 0 1303 254 109 37 chr17 57254113 57254598 -28183882 + MLT1G LTR MaLR 65 584 -6 342 0 0 0 chr17 57255002 57255040 -28183440 + (CAT)n Simple_repeat Simple_repeat 2 39 0 266 333 0 9 chr17 57256077 57256182 -28182298 + Tigger8 DNA MER2_type 47 150 -516 225 347 60 14 chr17 57256392 57256608 -28181872 + Tigger8 DNA MER2_type 383 608 -58 4300 83 0 11 chr17 57256980 57257592 -28180888 - L1PB1 LINE L1 -4 6147 5543 2084 107 76 0 chr17 57257593 57257910 -28180570 + L1PA15 LINE L1 5823 6163 -2 2915 212 116 12 chr17 57258457 57258560 -28179920 - L1ME2 LINE L1 -67 6097 6006 291 28 0 0 chr17 57258560 57258596 -28179884 + (CA)n Simple_repeat Simple_repeat 2 37 0 2915 212 116 12 chr17 57258596 57259724 -28178756 - L1ME2 LINE L1 -158 6006 4703 2261 110 72 17 chr17 57259724 57260069 -28178411 - THE1B LTR MaLR 0 364 1 2915 212 116 12 chr17 57260069 57260184 -28178296 - L1ME2 LINE L1 -1461 4703 4601 2256 137 27 97 chr17 57260184 57260667 -28177813 - MLT2B2 LTR ERVL 0 515 67 1230 116 6 6 chr17 57260686 57260867 -28177613 + AluSq SINE Alu 122 302 -11 594 182 0 58 chr17 57260876 57260997 -28177483 - MER5B DNA MER1_type -64 114 1 209 296 46 13 chr17 57260997 57261071 -28177409 - MIR3 SINE MIR -52 156 79 231 330 88 11 chr17 57261724 57261815 -28176665 + L2 LINE L2 3158 3255 -17 523 310 80 15 chr17 57263207 57263407 -28175073 + MIR SINE MIR 34 246 -16 228 86 0 0 chr17 57263417 57263452 -28175028 + (TTA)n Simple_repeat Simple_repeat 3 37 0 6877 49 22 10 chr17 57264123 57265003 -28173477 + L1PA6 LINE L1 5254 6143 -11 430 302 115 21 chr17 57265835 57266027 -28172453 - MIR SINE MIR -37 225 16 467 234 99 9 chr17 57266226 57266396 -28172084 + MIR SINE MIR 8 186 -55 2239 38 0 4 chr17 57266396 57266658 -28171822 - AluY SINE Alu -23 288 28 350 241 78 64 chr17 57266881 57267022 -28171458 + MLT1K LTR MaLR 366 508 -80 457 224 125 52 chr17 57267350 57267757 -28170723 + L1ME4a LINE L1 5562 5998 -123 3218 136 19 47 chr17 57268077 57268711 -28169769 + L1MB3 LINE L1 5530 6145 -38 266 268 89 47 chr17 57268967 57269115 -28169365 - MIR SINE MIR -63 145 5 844 290 111 48 chr17 57269423 57269571 -28168909 - L2 LINE L2 -2 3311 3174 1840 160 20 3 chr17 57269571 57269871 -28168609 + AluJb SINE Alu 1 305 -7 844 290 111 48 chr17 57269871 57270393 -28168087 - L2 LINE L2 -139 3174 2583 216 0 0 0 chr17 57270772 57270796 -28167684 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 351 208 30 100 chr17 57271342 57271523 -28166957 + MIR SINE MIR 34 206 -56 249 306 148 0 chr17 57271723 57271831 -28166649 - MIR3 SINE MIR -6 202 79 180 286 48 48 chr17 57271944 57272028 -28166452 + L2 LINE L2 3180 3263 -9 2347 250 11 5 chr17 57272179 57272844 -28165636 - L1P LINE L1 -2892 3254 2586 * 3311 203 51 2 chr17 57272843 57273645 -28164835 + L1PA15 LINE L1 4512 5352 -794 1020 126 142 0 chr17 57273649 57273839 -28164641 + L1PA15 LINE L1 5825 6041 -124 216 0 0 0 chr17 57273969 57273993 -28164487 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1410 192 85 3 chr17 57274941 57275258 -28163222 - MER2 DNA MER2_type -1 343 1 1387 148 128 44 chr17 57275357 57275701 -28162779 + THE1C LTR MaLR 1 373 -2 22 0 0 0 chr17 57275786 57275808 -28162672 + AT_rich Low_complexity Low_complexity 1 22 0 431 268 95 48 chr17 57276061 57276229 -28162251 - MIR3 SINE MIR -28 180 5 2198 143 60 26 chr17 57278962 57279476 -28159004 + MLT2A2 LTR ERVL 1 554 0 342 0 0 0 chr17 57280928 57280966 -28157514 + (TG)n Simple_repeat Simple_repeat 2 39 0 242 232 54 0 chr17 57281319 57281375 -28157105 - MIR3 SINE MIR -50 158 100 269 326 141 7 chr17 57281481 57281616 -28156864 - MIR SINE MIR -52 210 58 683 274 146 0 chr17 57281638 57281850 -28156630 + MIR SINE MIR 2 244 -18 2382 39 3 7 chr17 57281926 57282247 -28156233 - AluY SINE Alu 0 320 1 376 339 48 11 chr17 57283705 57283891 -28154589 - MIR SINE MIR -16 246 54 387 264 98 12 chr17 57284038 57284201 -28154279 + MIR SINE MIR 36 212 -50 29 0 0 0 chr17 57284837 57284866 -28153614 + AT_rich Low_complexity Low_complexity 1 29 0 757 169 0 0 chr17 57284866 57284984 -28153496 - FLAM_C SINE Alu -25 118 1 291 244 12 47 chr17 57286163 57286249 -28152231 - MER5B DNA MER1_type -95 83 1 2008 159 3 7 chr17 57287118 57287420 -28151060 - AluSx SINE Alu -11 301 1 1581 184 3 14 chr17 57287797 57288098 -28150382 - AluJo SINE Alu 0 298 1 932 228 0 15 chr17 57288181 57288383 -28150097 - AluJo SINE Alu -113 199 1 440 326 31 16 chr17 57288570 57288699 -28149781 + MIR3 SINE MIR 51 181 -27 1912 143 0 7 chr17 57289487 57289767 -28148713 - AluSx SINE Alu -34 278 1 401 308 76 12 chr17 57291156 57291406 -28147074 - L1M4 LINE L1 -1308 4838 4573 2133 109 3 0 chr17 57291422 57291705 -28146775 - AluSx SINE Alu -10 302 19 717 242 22 0 chr17 57291920 57292098 -28146382 + LTR16C LTR ERVL 298 479 -12 228 307 221 0 chr17 57292208 57292348 -28146132 + MIR SINE MIR 21 191 -71 243 252 282 8 chr17 57292629 57292760 -28145720 + MIR SINE MIR 31 197 -65 507 282 84 66 chr17 57293136 57293363 -28145117 + MIR SINE MIR 14 244 -18 189 74 0 0 chr17 57293419 57293446 -28145034 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1401 271 102 14 chr17 57293510 57294068 -28144412 + Tigger8 DNA MER2_type 1 607 -59 293 75 0 0 chr17 57294599 57294639 -28143841 - U2 snRNA snRNA -148 40 1 390 266 70 16 chr17 57296566 57296694 -28141786 + L2 LINE L2 3179 3313 0 1057 287 82 39 chr17 57297749 57298752 -28139728 + L1ME3 LINE L1 3682 4751 -1395 2662 179 25 41 chr17 57298752 57299311 -28139169 + MER44D DNA MER2_type 1 605 0 1057 287 82 39 chr17 57299311 57299562 -28138918 + L1ME3 LINE L1 4751 4990 -1156 195 114 0 0 chr17 57299566 57299601 -28138879 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 800 123 0 0 chr17 57299605 57299711 -28138769 - FRAM SINE Alu -33 143 38 1046 288 74 18 chr17 57299997 57300595 -28137885 + L1ME3 LINE L1 5294 5924 -238 24 67 0 0 chr17 57300732 57300777 -28137703 + AT_rich Low_complexity Low_complexity 1 45 0 1291 167 19 10 chr17 57301331 57301628 -28136852 - L1MA4 LINE L1 -1 6304 6009 2768 209 25 20 chr17 57302014 57302157 -28136323 - MER63C DNA MER1_type -130 930 789 14959 180 3 3 chr17 57302157 57304071 -28134409 + L1PA14 LINE L1 2212 4125 -2036 526 101 13 0 chr17 57304071 57304150 -28134330 - MADE1 DNA Mariner 0 80 1 14959 180 3 3 chr17 57304150 57304519 -28133961 + L1PA14 LINE L1 4125 4493 -1668 2317 106 0 3 chr17 57304519 57304830 -28133650 + AluSg SINE Alu 1 310 0 14959 180 3 3 chr17 57304830 57306530 -28131950 + L1PA14 LINE L1 4492 6161 0 2768 209 25 20 chr17 57306530 57307070 -28131410 - MER63C DNA MER1_type -271 789 244 23 54 0 0 chr17 57307109 57307146 -28131334 + AT_rich Low_complexity Low_complexity 1 37 0 354 313 44 48 chr17 57307752 57307979 -28130501 - MIR SINE MIR -34 228 3 264 324 57 29 chr17 57308123 57308228 -28130252 - L2 LINE L2 -15 3257 3150 1225 295 108 26 chr17 57308357 57308933 -28129547 + L3 LINE CR1 809 1431 -146 187 318 34 81 chr17 57310454 57310602 -28127878 - MIR SINE MIR -65 197 57 243 0 0 0 chr17 57311187 57311214 -28127266 + (T)n Simple_repeat Simple_repeat 1 27 0 191 222 289 33 chr17 57312100 57312190 -28126290 - L3 LINE CR1 -118 1459 1347 299 300 90 31 chr17 57313881 57314034 -28124446 + MIR SINE MIR 46 215 -47 339 264 0 0 chr17 57315249 57315321 -28123159 - L2 LINE L2 0 3313 3242 223 242 182 10 chr17 57315526 57315625 -28122855 - MIR SINE MIR 0 262 147 598 304 52 9 chr17 57316810 57317044 -28121436 + MIR SINE MIR 15 258 -4 382 308 70 29 chr17 57317755 57318096 -28120384 - L1MC4a LINE L1 -1897 5911 5557 393 197 222 17 chr17 57318786 57318903 -28119577 - MER5A DNA MER1_type 0 189 49 2494 119 18 2 chr17 57319541 57319936 -28118544 + MSTA LTR MaLR 1 401 -27 1038 144 0 0 chr17 57319950 57320130 -28118350 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 228 78 0 109 chr17 57320131 57320195 -28118285 + (TTTCC)n Simple_repeat Simple_repeat 5 61 0 1664 191 13 20 chr17 57320204 57320502 -28117978 - AluJb SINE Alu -14 298 3 189 279 162 9 chr17 57320621 57320732 -28117748 - L2 LINE L2 0 3272 3145 204 364 87 14 chr17 57320767 57320950 -28117530 - MIR SINE MIR -56 206 18 2120 147 0 0 chr17 57321333 57321640 -28116840 + AluSx SINE Alu 5 311 -1 261 261 42 34 chr17 57322001 57322120 -28116360 + MER103 DNA DNA 1 120 -46 352 323 85 48 chr17 57322192 57322440 -28116040 - L2 LINE L2 -208 3064 2808 234 208 0 0 chr17 57322638 57322691 -28115789 + GA-rich Low_complexity Low_complexity 1 53 0 1001 186 13 58 chr17 57323206 57323432 -28115048 - MER20 DNA MER1_type -3 216 1 218 269 58 0 chr17 57324128 57324180 -28114300 - MIR SINE MIR -62 146 92 21 0 0 0 chr17 57324547 57324568 -28113912 + AT_rich Low_complexity Low_complexity 1 21 0 748 193 106 6 chr17 57325054 57325215 -28113265 - MER45A DNA AcHobo 0 178 2 626 220 50 71 chr17 57325487 57325669 -28112811 - MIR SINE MIR -83 179 2 360 294 119 0 chr17 57327136 57327262 -28111218 + MIR SINE MIR 96 236 -26 7343 157 32 11 chr17 57328277 57329894 -28108586 + L1PB1 LINE L1 3591 5173 -978 2070 114 64 25 chr17 57329894 57330255 -28108225 + THE1C LTR MaLR 1 375 0 7343 157 32 11 chr17 57330255 57330767 -28107713 + L1PB1 LINE L1 5173 5791 -360 570 15 0 0 chr17 57330767 57330834 -28107646 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 7343 157 32 11 chr17 57330834 57331203 -28107277 + L1PB1 LINE L1 5791 6151 0 608 230 0 0 chr17 57331481 57331620 -28106860 - L1 LINE L1 -2428 3718 3580 931 136 32 7 chr17 57331850 57332004 -28106476 + AluSc SINE Alu 152 309 0 579 171 166 55 chr17 57332368 57332549 -28105931 + MER20 DNA MER1_type 19 219 0 1914 133 3 48 chr17 57332555 57332870 -28105610 + AluSx SINE Alu 1 301 -11 1036 178 16 0 chr17 57333518 57333703 -28104777 - MER5A DNA MER1_type 0 189 2 401 252 82 74 chr17 57334459 57334729 -28103751 + L1ME4a LINE L1 5753 6024 -97 24 53 0 0 chr17 57334739 57334777 -28103703 + AT_rich Low_complexity Low_complexity 1 38 0 2250 56 0 7 chr17 57335769 57336082 -28102398 - AluY SINE Alu 0 311 1 2125 137 0 0 chr17 57336235 57336528 -28101952 + AluSx SINE Alu 1 293 -19 2124 112 3 0 chr17 57336530 57336816 -28101664 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr17 57336816 57336836 -28101644 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 189 0 0 0 chr17 57336842 57336863 -28101617 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 240 344 21 0 chr17 57337106 57337202 -28101278 + MLT1I LTR MaLR 28 125 -284 236 280 142 15 chr17 57337842 57338110 -28100370 - L1ME4a LINE L1 -34 6087 5786 192 304 48 64 chr17 57338188 57338313 -28100167 - L2 LINE L2 -198 3074 2952 743 289 185 14 chr17 57338687 57339109 -28099371 + LTR33A LTR ERVL 1 494 -29 287 339 139 52 chr17 57339302 57339683 -28098797 - L2 LINE L2 -4 3268 2855 525 313 8 0 chr17 57340429 57340563 -28097917 - MIR3 SINE MIR -50 158 24 1090 153 0 0 chr17 57340989 57341178 -28097302 + MER53 DNA DNA 1 189 0 382 313 58 46 chr17 57341375 57342093 -28096387 + L1M4 LINE L1 4110 4836 -1310 1392 156 8 17 chr17 57342305 57342543 -28095937 + MER1B DNA MER1_type 1 196 -101 241 94 0 0 chr17 57342545 57342577 -28095903 + MER1B DNA MER1_type 233 264 -75 654 110 0 0 chr17 57342763 57342854 -28095626 - MER1B DNA MER1_type -89 250 160 896 177 14 0 chr17 57342855 57343002 -28095478 - AluJb SINE Alu -17 295 147 495 115 0 13 chr17 57343014 57343092 -28095388 + MER1B DNA MER1_type 253 329 0 1631 186 0 23 chr17 57344117 57344424 -28094056 - AluJo SINE Alu -12 300 1 1469 147 76 8 chr17 57344619 57344857 -28093623 - AluJb SINE Alu -24 288 35 232 295 139 16 chr17 57345460 57345582 -28092898 - L2 LINE L2 -3 3269 3133 5319 165 56 5 chr17 57345967 57347289 -28091191 - L1MC1 LINE L1 -1 6332 4942 7919 12 0 0 chr17 57347461 57348815 -28089665 - L1PA2 LINE L1 -1 6154 4801 16188 28 0 1 chr17 57348815 57350865 -28087615 + L1P LINE L1 1304 3352 -2794 737 215 0 0 chr17 57350871 57351020 -28087460 - L1MC1 LINE L1 -1198 4948 4800 601 162 0 10 chr17 57351098 57351197 -28087283 + MLT1D LTR MaLR 1 98 -407 2485 235 82 27 chr17 57351226 57351406 -28087074 - MER21B LTR ERV1 -177 686 517 2810 7 0 0 chr17 57351406 57351705 -28086775 + AluYa5 SINE Alu 1 299 -12 2485 235 82 27 chr17 57351705 57352157 -28086323 - MER21B LTR ERV1 -346 517 19 285 311 0 22 chr17 57352177 57352267 -28086213 - MER21B LTR ERV1 -771 92 5 234 0 0 0 chr17 57352267 57352293 -28086187 + (TA)n Simple_repeat Simple_repeat 2 27 0 324 70 0 0 chr17 57352293 57352336 -28086144 + (CA)n Simple_repeat Simple_repeat 2 44 0 676 233 19 74 chr17 57352445 57352660 -28085820 + MLT1D LTR MaLR 299 501 -4 225 0 0 0 chr17 57352764 57352789 -28085691 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 7538 53 0 0 chr17 57352793 57354062 -28084418 - L1PA5 LINE L1 -11 6143 4870 294 228 174 71 chr17 57354343 57354527 -28083953 + MIR SINE MIR 10 212 -50 182 226 113 16 chr17 57355599 57355661 -28082819 - L2 LINE L2 -13 3300 3233 199 284 15 47 chr17 57356020 57356143 -28082337 + MIR SINE MIR 51 192 -70 4620 156 27 9 chr17 57356310 57357095 -28081385 - Tigger1 DNA MER2_type 0 2418 1620 2835 141 14 0 chr17 57357095 57357514 -28080966 - MSTB LTR MaLR -1 425 1 * 10326 143 16 6 chr17 57357514 57359118 -28079362 - Tigger1 DNA MER2_type -798 1620 2 239 154 0 92 chr17 57359119 57359184 -28079296 - L1MCa LINE L1 -4362 2064 2006 767 314 9 9 chr17 57359309 57359538 -28078942 + MIR SINE MIR 31 259 -3 557 325 46 5 chr17 57361051 57361245 -28077235 - MIR SINE MIR -15 247 46 329 260 60 10 chr17 57362022 57362122 -28076358 - MER103 DNA DNA -5 161 57 232 233 165 48 chr17 57362242 57362345 -28076135 - MER5B DNA MER1_type -41 137 23 27 49 0 0 chr17 57362982 57363023 -28075457 + AT_rich Low_complexity Low_complexity 1 41 0 268 42 0 42 chr17 57363034 57363082 -28075398 + (CAAAA)n Simple_repeat Simple_repeat 5 50 0 189 94 0 0 chr17 57365562 57365594 -28072886 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 462 194 0 51 chr17 57367011 57367109 -28071371 - L2 LINE L2 0 3313 3221 979 214 0 20 chr17 57367114 57367310 -28071170 + AluJo SINE Alu 1 192 -120 499 299 138 26 chr17 57367317 57367695 -28070785 - L2 LINE L2 -78 3235 2816 183 340 43 0 chr17 57368697 57368791 -28069689 + MIR SINE MIR 98 195 -67 302 292 0 11 chr17 57369999 57370088 -28068392 + L1MC4 LINE L1 6616 6703 -1339 2086 125 7 0 chr17 57370106 57370395 -28068085 - AluSx SINE Alu -21 291 1 344 290 99 91 chr17 57371184 57371307 -28067173 + L2 LINE L2 1294 1414 -1900 1623 194 21 0 chr17 57371307 57371595 -28066885 + AluJo SINE Alu 1 294 -18 344 290 99 91 chr17 57371595 57372067 -28066413 + L2 LINE L2 1414 1894 -1420 201 191 21 0 chr17 57372186 57372233 -28066247 + A-rich Low_complexity Low_complexity 2 49 0 1908 133 35 0 chr17 57372602 57372888 -28065592 - AluSx SINE Alu -13 299 4 506 266 79 22 chr17 57372987 57373252 -28065228 + MLT1I LTR MaLR 130 416 -34 280 317 58 29 chr17 57373291 57373395 -28065085 - MIR SINE MIR -142 120 14 237 178 0 0 chr17 57373530 57373575 -28064905 + (TA)n Simple_repeat Simple_repeat 2 46 0 249 152 0 0 chr17 57373575 57373621 -28064859 - LTR66 LTR ERVL -171 439 394 * 251 152 0 0 chr17 57373581 57373627 -28064853 + LTR66 LTR ERVL 394 439 -171 211 231 25 16 chr17 57373627 57373748 -28064732 + (TA)n Simple_repeat Simple_repeat 2 123 0 228 244 26 39 chr17 57373818 57373896 -28064584 - L2 LINE L2 -1 3271 3195 263 178 0 0 chr17 57374351 57374396 -28064084 - MIR3 SINE MIR -6 202 158 274 304 35 17 chr17 57374463 57374578 -28063902 + MER117 DNA MER1_type 81 197 0 213 258 0 61 chr17 57374578 57374644 -28063836 - MIR3 SINE MIR -48 160 99 335 333 0 0 chr17 57374650 57374743 -28063737 - MIR SINE MIR -78 130 38 232 254 28 28 chr17 57375077 57375148 -28063332 + Tigger3(Golem) DNA MER2_type 1048 1118 -1911 274 291 64 71 chr17 57375815 57375956 -28062524 - MIR SINE MIR -118 144 5 562 279 44 111 chr17 57376318 57376813 -28061667 - L2 LINE L2 0 3272 2811 2308 109 3 0 chr17 57377810 57378122 -28060358 - AluSq SINE Alu 0 313 1 1940 171 10 75 chr17 57378208 57378624 -28059856 + MLT1B LTR MaLR 2 390 0 293 245 31 71 chr17 57378773 57378871 -28059609 + MLT1K LTR MaLR 189 282 -306 273 298 29 0 chr17 57378964 57379068 -28059412 + LTR67 LTR ERVL 430 536 -21 212 241 74 0 chr17 57379200 57379254 -28059226 - L2 LINE L2 0 3313 3256 187 222 0 0 chr17 57379412 57379448 -28059032 - L2 LINE L2 -10 3303 3268 514 260 13 19 chr17 57379660 57379814 -28058666 - MIR SINE MIR -42 220 68 252 113 0 48 chr17 57380421 57380483 -28057997 + (GAAAA)n Simple_repeat Simple_repeat 1 59 0 416 161 0 11 chr17 57381753 57381840 -28056640 + CT-rich Low_complexity Low_complexity 2 87 0 1091 236 5 9 chr17 57383910 57384130 -28054350 - MER58A DNA MER1_type -2 222 4 245 372 11 0 chr17 57384140 57384234 -28054246 + MIR SINE MIR 19 113 -95 186 233 100 0 chr17 57384427 57384487 -28053993 - MIR SINE MIR -74 188 123 2144 129 0 26 chr17 57384488 57384799 -28053681 + AluSx SINE Alu 1 303 -9 341 276 23 0 chr17 57384810 57384897 -28053583 - MIR SINE MIR -128 134 46 500 282 162 54 chr17 57385009 57385368 -28053112 + L2 LINE L2 2668 3069 -244 212 189 0 75 chr17 57385658 57385711 -28052769 - L3 LINE CR1 -13 1564 1516 431 321 0 37 chr17 57385892 57386026 -28052454 - MIR SINE MIR -57 151 23 244 120 40 0 chr17 57386362 57386412 -28052068 + GA-rich Low_complexity Low_complexity 4 55 0 212 323 0 15 chr17 57388152 57388217 -28050263 + L2 LINE L2 3247 3310 -3 369 0 0 0 chr17 57388572 57388613 -28049867 + (CA)n Simple_repeat Simple_repeat 2 42 0 191 299 15 15 chr17 57388659 57388726 -28049754 + L2 LINE L2 2998 3064 -208 198 376 0 43 chr17 57388819 57388936 -28049544 + L2 LINE L2 3185 3296 -17 1054 241 43 80 chr17 57390359 57390711 -28047769 - MER102b DNA MER1_type -2 339 1 588 289 28 11 chr17 57391794 57391974 -28046506 + MIR SINE MIR 20 202 -60 344 358 40 20 chr17 57392394 57392542 -28045938 + MIR SINE MIR 3 153 -109 462 305 158 11 chr17 57392756 57392946 -28045534 + MIR SINE MIR 20 237 -25 2249 127 58 19 chr17 57393168 57393529 -28044951 + THE1C LTR MaLR 1 375 0 10107 125 35 11 chr17 57393530 57395035 -28043445 + THE1C-int LTR MaLR 2 1542 -38 1089 63 0 0 chr17 57395035 57395178 -28043302 + THE1C-int LTR MaLR 1438 1580 0 2262 154 19 8 chr17 57395178 57395548 -28042932 + THE1C LTR MaLR 1 374 -1 261 0 0 0 chr17 57396690 57396719 -28041761 + (T)n Simple_repeat Simple_repeat 1 29 0 371 302 39 16 chr17 57396723 57396852 -28041628 - L2 LINE L2 -25 3247 3116 1872 214 24 41 chr17 57396856 57397323 -28041157 - MLT1C LTR MaLR -3 464 6 213 319 60 26 chr17 57397332 57397448 -28041032 - L2 LINE L2 -167 3146 3027 2283 108 0 3 chr17 57398647 57398952 -28039528 + AluSc SINE Alu 1 304 -5 743 221 25 35 chr17 57400114 57400313 -28038167 - MIR SINE MIR -13 249 53 364 314 173 48 chr17 57400487 57401200 -28037280 - L2 LINE L2 -649 2665 1864 219 295 32 21 chr17 57401202 57401297 -28037183 - L3 LINE CR1 -351 1226 1131 423 335 41 27 chr17 57401498 57401719 -28036761 - L3 LINE CR1 -1111 466 243 2291 125 0 3 chr17 57402065 57402378 -28036102 + AluSx SINE Alu 1 312 0 27 29 0 0 chr17 57403084 57403118 -28035362 + AT_rich Low_complexity Low_complexity 1 34 0 282 356 39 10 chr17 57403729 57403833 -28034647 + L2 LINE L2 3111 3217 -55 258 295 124 37 chr17 57405411 57405574 -28032906 + MIR SINE MIR 21 187 -71 286 295 51 10 chr17 57405750 57405856 -28032624 + MIR SINE MIR 80 187 -21 304 241 0 0 chr17 57406217 57406275 -28032205 + MER21B LTR ERV1 30 87 -776 2754 220 84 41 chr17 57406300 57407108 -28031372 + MER21B LTR ERV1 19 861 -2 405 0 0 0 chr17 57407302 57407347 -28031133 + (CA)n Simple_repeat Simple_repeat 2 46 0 1920 183 3 19 chr17 57407920 57408291 -28030189 + MLT1A1 LTR MaLR 1 365 0 191 222 95 0 chr17 57408596 57408659 -28029821 + MIR SINE MIR 123 191 -71 783 151 25 0 chr17 57409013 57409132 -28029348 - FLAM_C SINE Alu -11 122 1 434 204 0 0 chr17 57412111 57412199 -28026281 + MER103 DNA DNA 2 89 -77 2133 122 6 13 chr17 57413262 57413574 -28024906 + AluSx SINE Alu 1 310 -2 328 269 125 10 chr17 57413590 57413694 -28024786 + MIR SINE MIR 37 152 -110 602 277 62 55 chr17 57415105 57415361 -28023119 + MIR SINE MIR 5 262 0 240 311 107 8 chr17 57415547 57415669 -28022811 - L2 LINE L2 -1 3271 3138 9561 102 6 1 chr17 57416159 57417643 -28020837 + L1M LINE L1 3917 5406 -757 628 287 37 49 chr17 57417707 57417981 -28020499 + L1ME2 LINE L1 5316 5587 -575 2290 103 0 7 chr17 57417981 57418282 -28020198 - AluSx SINE Alu -13 299 1 628 287 37 49 chr17 57418282 57418335 -28020145 + L1ME2 LINE L1 5587 5639 -523 292 225 88 0 chr17 57418362 57418442 -28020038 + L1ME2 LINE L1 6004 6090 -74 398 284 104 22 chr17 57418448 57418631 -28019849 - L2 LINE L2 -657 2657 2460 450 312 123 23 chr17 57418634 57418935 -28019545 - L1M4 LINE L1 -1144 5002 4672 706 239 80 35 chr17 57418960 57419186 -28019294 - MIR SINE MIR -1 261 26 234 274 0 27 chr17 57419445 57419518 -28018962 + CT-rich Low_complexity Low_complexity 3 73 0 1454 237 163 24 chr17 57419580 57420214 -28018266 - L1MC4a LINE L1 0 7808 7087 351 0 0 0 chr17 57420225 57420264 -28018216 + (TTA)n Simple_repeat Simple_repeat 2 40 0 27706 118 18 55 chr17 57420264 57426659 -28011821 - L1PA8 LINE L1 -16 6156 12 1377 240 99 36 chr17 57427218 57427802 -28010678 - L1ME2 LINE L1 -27 6137 5517 2022 139 3 3 chr17 57427803 57428106 -28010374 - AluSp SINE Alu -10 303 1 2210 106 3 0 chr17 57429014 57429306 -28009174 + AluSp SINE Alu 1 293 -20 1604 172 25 95 chr17 57429349 57429792 -28008688 - L1MA6 LINE L1 -221 6079 5668 228 143 0 41 chr17 57429793 57429842 -28008638 + L1MA7 LINE L1 6245 6291 0 464 270 45 62 chr17 57429866 57430044 -28008436 + MIR SINE MIR 2 176 -86 235 326 11 22 chr17 57430076 57430165 -28008315 - L2 LINE L2 -8 3264 3177 333 269 56 0 chr17 57430618 57430726 -28007754 - MIR3 SINE MIR 0 208 95 1343 243 53 14 chr17 57432132 57432547 -28005933 + LTR47B LTR ERVL 1 431 -12 810 167 8 0 chr17 57432944 57433076 -28005404 + FLAM_C SINE Alu 1 133 0 279 288 18 63 chr17 57433606 57433717 -28004763 - MIR SINE MIR -84 124 19 315 302 52 0 chr17 57433805 57433901 -28004579 - MIR SINE MIR -74 188 88 5165 175 41 10 chr17 57434183 57436166 -28002314 - L1PA16 LINE L1 -9 6157 4126 183 80 0 0 chr17 57436186 57436211 -28002269 + (CTG)n Simple_repeat Simple_repeat 2 26 0 933 269 52 40 chr17 57436221 57436570 -28001910 + L2 LINE L2 1931 2283 -1031 463 240 103 7 chr17 57436647 57436793 -28001687 - MER46C DNA MER2_type -97 241 82 674 255 43 29 chr17 57436828 57437036 -28001444 + L2 LINE L2 3103 3313 0 332 333 13 47 chr17 57437201 57437351 -28001129 - MIR3 SINE MIR -20 188 44 32 67 0 0 chr17 57437673 57437733 -28000747 + AT_rich Low_complexity Low_complexity 1 60 0 223 91 23 23 chr17 57437769 57437813 -28000667 + (TA)n Simple_repeat Simple_repeat 1 44 0 317 330 0 0 chr17 57437831 57437934 -28000546 + MIR SINE MIR 59 161 -101 1036 266 8 0 chr17 57438051 57438288 -28000192 + MIR SINE MIR 3 241 -21 282 256 44 44 chr17 57439809 57439899 -27998581 + L2 LINE L2 3182 3271 -1 954 284 48 43 chr17 57440019 57440417 -27998063 + MLT1J2 LTR MaLR 5 404 -46 2122 159 6 0 chr17 57440483 57440842 -27997638 - MER46B DNA MER2_type 0 236 1 31 44 0 0 chr17 57441181 57441226 -27997254 + AT_rich Low_complexity Low_complexity 1 45 0 1411 222 21 0 chr17 57441227 57441511 -27996969 + AluJo SINE Alu 1 290 -22 246 311 170 0 chr17 57442009 57442115 -27996365 + MIR SINE MIR 23 146 -116 460 237 230 7 chr17 57442162 57442301 -27996179 + MER5A DNA MER1_type 10 179 -10 285 51 0 0 chr17 57442512 57442551 -27995929 + (TC)n Simple_repeat Simple_repeat 2 40 0 270 0 0 0 chr17 57442553 57442583 -27995897 + (CA)n Simple_repeat Simple_repeat 1 30 0 724 210 150 0 chr17 57443213 57443380 -27995100 + MIR SINE MIR 69 260 -2 190 284 134 15 chr17 57444009 57444076 -27994404 + MIR3 SINE MIR 88 162 -46 206 238 0 0 chr17 57444090 57444132 -27994348 - L3 LINE CR1 -13 1564 1523 222 344 175 7 chr17 57444758 57444912 -27993568 - L3 LINE CR1 -429 1148 969 302 291 199 21 chr17 57446438 57446579 -27991901 - MIR SINE MIR 0 262 97 596 329 179 28 chr17 57446806 57447439 -27991041 + L2 LINE L2 1726 2453 -861 254 318 24 32 chr17 57447511 57447637 -27990843 + L2 LINE L2 3189 3313 0 406 261 9 18 chr17 57447719 57447830 -27990650 + MIR SINE MIR 152 261 -1 2829 207 12 14 chr17 57447998 57448654 -27989826 + L1MB8 LINE L1 5508 6162 -16 217 279 66 0 chr17 57449127 57449188 -27989292 - L2 LINE L2 -8 3305 3241 328 267 145 8 chr17 57449340 57449471 -27989009 - L2 LINE L2 -137 3176 3028 568 160 172 24 chr17 57449475 57449644 -27988836 - L1ME3A LINE L1 0 6170 5977 2252 144 72 0 chr17 57449709 57450099 -27988381 - MSTB1 LTR MaLR 0 432 15 199 250 0 33 chr17 57450391 57450451 -27988029 - L2 LINE L2 -211 3061 3004 24 53 0 0 chr17 57450856 57450894 -27987586 + AT_rich Low_complexity Low_complexity 1 38 0 1965 174 40 79 chr17 57451357 57451875 -27986605 - MLT1D LTR MaLR 0 505 8 303 284 52 22 chr17 57451884 57452018 -27986462 - L1ME3A LINE L1 -2228 5580 5443 342 242 54 27 chr17 57452084 57452233 -27986247 - L1ME3A LINE L1 -737 5425 5273 443 368 27 11 chr17 57452370 57452555 -27985925 + MIR3 SINE MIR 20 207 -1 403 339 52 11 chr17 57452775 57452949 -27985531 - MIR SINE MIR -1 261 81 268 357 37 54 chr17 57453246 57453543 -27984937 + L1MC4a LINE L1 5392 5683 -2125 215 299 0 15 chr17 57453547 57453614 -27984866 + (CATA)n Simple_repeat Simple_repeat 3 68 0 507 286 30 10 chr17 57453623 57453822 -27984658 + L1MC4a LINE L1 5709 5911 -1897 239 93 23 0 chr17 57455825 57455868 -27982612 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 419 313 140 52 chr17 57455890 57456334 -27982146 - L2 LINE L2 0 3313 2831 289 288 0 0 chr17 57456623 57456703 -27981777 - MIR SINE MIR -16 246 167 494 306 29 10 chr17 57456705 57456911 -27981569 + MLT1I LTR MaLR 3 212 -197 1255 142 19 9 chr17 57456948 57457159 -27981321 + MER20 DNA MER1_type 1 213 -6 464 289 66 12 chr17 57457170 57457336 -27981144 + MLT1I LTR MaLR 233 407 -2 632 258 46 7 chr17 57457344 57457495 -27980985 - MIR SINE MIR -99 163 7 614 271 103 28 chr17 57457826 57458040 -27980440 + MIR SINE MIR 28 257 -5 2206 105 0 10 chr17 57458158 57458463 -27980017 + AluSc SINE Alu 1 302 -7 1180 137 0 0 chr17 57458463 57458624 -27979856 + AluSc SINE Alu 132 292 -17 23 0 0 0 chr17 57458624 57458647 -27979833 + AT_rich Low_complexity Low_complexity 1 23 0 200 337 31 10 chr17 57459807 57459905 -27978575 - MIR SINE MIR -73 135 36 347 305 152 0 chr17 57460284 57460435 -27978045 + MIR SINE MIR 77 250 -12 717 230 80 52 chr17 57460473 57460686 -27977794 - MER20 DNA MER1_type 0 219 1 270 56 0 0 chr17 57460748 57460784 -27977696 + (CA)n Simple_repeat Simple_repeat 1 36 0 336 227 0 23 chr17 57460898 57461026 -27977454 + GA-rich Low_complexity Low_complexity 1 125 0 521 252 34 34 chr17 57461975 57462122 -27976358 + MIR3 SINE MIR 6 152 -56 326 223 89 18 chr17 57462177 57462289 -27976191 - MER112 DNA MER1_type -76 184 65 267 270 59 138 chr17 57462525 57462829 -27975651 + L2 LINE L2 2945 3224 -48 800 192 0 0 chr17 57463613 57463738 -27974742 + FLAM_C SINE Alu 1 125 -8 310 327 77 18 chr17 57463769 57463937 -27974543 - MER5B DNA MER1_type 0 178 1 216 186 0 0 chr17 57464126 57464169 -27974311 + (TATAG)n Simple_repeat Simple_repeat 1 43 0 494 253 33 20 chr17 57464536 57464686 -27973794 - MER5A DNA MER1_type -3 186 35 188 125 75 0 chr17 57464703 57464743 -27973737 - MER5C DNA MER1_type -2 322 280 253 187 0 6 chr17 57464881 57464961 -27973519 - MER5C DNA MER1_type -200 124 2 1240 197 97 63 chr17 57465225 57465575 -27972905 - MLT1A1 LTR MaLR 0 365 4 286 335 162 32 chr17 57466478 57466889 -27971591 + L2 LINE L2 2596 3045 -227 261 83 0 0 chr17 57467606 57467642 -27970838 + (CA)n Simple_repeat Simple_repeat 2 37 0 717 259 65 22 chr17 57467813 57468045 -27970435 - L2 LINE L2 0 3313 3072 288 53 0 0 chr17 57468051 57468089 -27970391 + (TG)n Simple_repeat Simple_repeat 2 39 0 1521 212 179 12 chr17 57468168 57468588 -27969892 - MLT1D LTR MaLR -3 502 13 545 234 262 16 chr17 57468647 57468899 -27969581 - L2 LINE L2 -337 2977 2664 4460 122 43 8 chr17 57469242 57469896 -27968584 - L1PA15 LINE L1 -10 6155 5479 283 60 20 0 chr17 57469896 57469941 -27968539 - L1M LINE L1 -709 5422 5373 586 272 80 36 chr17 57470347 57470571 -27967909 - MIR SINE MIR -12 250 17 1625 188 0 32 chr17 57470889 57471197 -27967283 + AluJo SINE Alu 1 298 -14 181 351 27 0 chr17 57471572 57471646 -27966834 - MIR SINE MIR -21 241 166 2109 88 0 120 chr17 57471670 57472021 -27966459 + AluSc SINE Alu 1 309 0 2249 158 80 42 chr17 57472206 57472656 -27965824 - MLT1C LTR MaLR 0 467 1 273 355 64 0 chr17 57473105 57473215 -27965265 - MIR SINE MIR -138 124 8 1714 239 114 19 chr17 57473388 57473912 -27964568 + MLT1E2 LTR MaLR 52 625 -1 2309 77 0 26 chr17 57473916 57474226 -27964254 + AluY SINE Alu 1 302 -9 2227 102 0 0 chr17 57475760 57476077 -27962403 - AluSq SINE Alu 0 317 1 1878 242 40 35 chr17 57476201 57476746 -27961734 + MER74B LTR ERVL 69 616 -6 222 261 0 29 chr17 57477051 57477120 -27961360 + GA-rich Low_complexity Low_complexity 3 69 0 405 58 0 0 chr17 57478878 57478930 -27959550 + (CA)n Simple_repeat Simple_repeat 2 53 0 253 286 0 29 chr17 57479087 57479157 -27959323 + L3 LINE CR1 1491 1558 -19 22 70 0 0 chr17 57479457 57479500 -27958980 + AT_rich Low_complexity Low_complexity 1 43 0 2393 232 100 29 chr17 57479775 57480761 -27957719 - L1ME3 LINE L1 -1 6161 5106 860 309 70 34 chr17 57480957 57481546 -27956934 - L1MC4a LINE L1 -1902 5906 5297 772 310 93 31 chr17 57481909 57482271 -27956209 - L2 LINE L2 -7 3306 2909 1693 152 10 14 chr17 57482271 57482561 -27955919 + AluSx SINE Alu 13 301 -11 772 310 93 31 chr17 57482561 57482650 -27955830 - L2 LINE L2 -404 2909 2827 983 168 67 6 chr17 57482729 57482908 -27955572 + L1PA15 LINE L1 5963 6152 -13 376 92 6 34 chr17 57482908 57482977 -27955503 + L1PB1 LINE L1 5670 5735 -416 2181 118 52 32 chr17 57482977 57483325 -27955155 - THE1B LTR MaLR -9 355 1 11961 98 1 4 chr17 57483325 57484206 -27954274 - THE1B-int LTR MaLR 0 1580 706 4357 99 30 0 chr17 57484206 57484769 -27953711 - LTR19B LTR ERV1 0 580 1 11961 98 1 4 chr17 57484769 57485473 -27953007 - THE1B-int LTR MaLR -874 706 1 2078 148 53 34 chr17 57485473 57485830 -27952650 - THE1B LTR MaLR 0 364 1 2845 116 20 2 chr17 57485830 57486237 -27952243 + L1PB1 LINE L1 5737 6150 -1 441 0 0 0 chr17 57486250 57486299 -27952181 + (TG)n Simple_repeat Simple_repeat 1 49 0 222 37 0 0 chr17 57486380 57486407 -27952073 + (TTA)n Simple_repeat Simple_repeat 2 28 0 4066 88 74 2 chr17 57486545 57487113 -27951367 - L1PA8 LINE L1 -172 6000 5392 * 4414 136 9 46 chr17 57487108 57487999 -27950481 + L1P LINE L1 3076 3933 -2213 180 300 73 73 chr17 57488526 57488636 -27949844 - L2 LINE L2 -9 3263 3154 1719 173 0 3 chr17 57488749 57489038 -27949442 + AluJo SINE Alu 1 288 -24 353 266 108 14 chr17 57489774 57489913 -27948567 - MIR SINE MIR -102 160 9 594 293 95 49 chr17 57490074 57490484 -27947996 + L1ME4a LINE L1 5463 5891 -230 357 75 0 0 chr17 57491663 57491716 -27946764 + (CA)n Simple_repeat Simple_repeat 2 54 0 887 219 105 43 chr17 57491757 57491967 -27946513 - MER58A DNA MER1_type -1 223 1 209 257 54 14 chr17 57492772 57492846 -27945634 + MIR SINE MIR 55 131 -131 2044 149 7 0 chr17 57493497 57493799 -27944681 - AluSq SINE Alu -8 305 2 213 174 0 58 chr17 57493846 57493932 -27944548 + (TTTA)n Simple_repeat Simple_repeat 4 84 0 1223 256 88 28 chr17 57494310 57494716 -27943764 - MLT1C LTR MaLR 0 467 31 252 0 0 0 chr17 57494716 57494744 -27943736 + (TA)n Simple_repeat Simple_repeat 2 29 0 1223 256 88 28 chr17 57494744 57494762 -27943718 - MLT1C LTR MaLR -436 31 16 315 164 49 0 chr17 57494799 57494860 -27943620 + L2 LINE L2 3249 3312 -1 287 339 65 8 chr17 57494865 57494989 -27943491 - MIR SINE MIR -56 152 22 230 227 0 0 chr17 57495695 57495739 -27942741 - LTR33 LTR ERVL -358 163 120 455 254 70 45 chr17 57495768 57495969 -27942511 + MER102a DNA MER1_type 93 298 -32 203 262 0 0 chr17 57496682 57496724 -27941756 - L2 LINE L2 -20 3293 3252 207 286 79 0 chr17 57497202 57497265 -27941215 + L2 LINE L2 3246 3313 0 388 32 16 32 chr17 57497605 57497668 -27940812 + (CAAAAA)n Simple_repeat Simple_repeat 6 67 0 303 269 21 11 chr17 57497679 57497772 -27940708 - LTR16A LTR ERVL -106 344 251 3960 151 14 50 chr17 57497783 57498271 -27940209 + MER50 LTR ERV1 11 465 -269 2094 117 3 0 chr17 57498271 57498597 -27939883 + AluSq SINE Alu 1 327 0 3960 151 14 50 chr17 57498597 57498847 -27939633 + MER50 LTR ERV1 465 723 -11 302 267 25 93 chr17 57498836 57498997 -27939483 - LTR16A LTR ERVL -196 254 105 * 313 246 14 88 chr17 57499180 57499391 -27939089 + MIR SINE MIR 2 243 -19 802 301 57 53 chr17 57499391 57499989 -27938491 - L1MC4a LINE L1 -337 5825 5293 1515 290 41 50 chr17 57501312 57501998 -27936482 + L1ME LINE L1 3 682 -5388 661 302 68 32 chr17 57503149 57503401 -27935079 - MIR SINE MIR -1 261 1 384 322 41 56 chr17 57504550 57504765 -27933715 - MIR SINE MIR -18 244 32 321 321 14 64 chr17 57504823 57504963 -27933517 + MIR SINE MIR 48 180 -82 2907 192 48 0 chr17 57505843 57506401 -27932079 + L1MB5 LINE L1 5571 6155 -19 2731 26 0 0 chr17 57506633 57506939 -27931541 + AluYa5 SINE Alu 1 306 -5 359 203 61 68 chr17 57507286 57507434 -27931046 + L1ME3A LINE L1 5887 6033 -137 434 194 69 83 chr17 57507482 57507626 -27930854 + L1ME3A LINE L1 6029 6170 0 221 0 35 0 chr17 57508281 57508310 -27930170 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2305 85 7 13 chr17 57508896 57509202 -27929278 + AluSc SINE Alu 6 309 0 1424 185 55 85 chr17 57509336 57509687 -27928793 + MLT1C LTR MaLR 23 358 -109 4399 101 0 0 chr17 57509687 57510241 -27928239 + MER41A LTR ERV1 1 554 0 1424 185 55 85 chr17 57510241 57510348 -27928132 + MLT1C LTR MaLR 358 467 0 227 336 35 63 chr17 57511051 57511194 -27927286 - L2 LINE L2 0 3272 3134 407 268 115 13 chr17 57511302 57511459 -27927021 + LTR33 LTR ERVL 1 173 -348 721 204 33 0 chr17 57511556 57511708 -27926772 + LTR33 LTR ERVL 364 520 -1 289 353 35 18 chr17 57511708 57511878 -27926602 - L2 LINE L2 -212 3060 2888 1302 180 28 82 chr17 57512531 57512623 -27925857 - MER33 DNA MER1_type -2261 324 229 2333 137 60 39 chr17 57512623 57512727 -27925753 + L1MB2 LINE L1 5725 5825 -346 1952 125 17 10 chr17 57512727 57513016 -27925464 - AluSx SINE Alu -21 291 1 2333 137 60 39 chr17 57513016 57513342 -27925138 + L1MB2 LINE L1 5825 6164 -7 1302 180 28 82 chr17 57513342 57513604 -27924876 - MER33 DNA MER1_type -2356 229 1 5199 154 13 2 chr17 57513923 57514752 -27923728 + Tigger1 DNA MER2_type 2 839 -1579 26764 139 17 14 chr17 57514752 57515962 -27922518 + L1PA8A LINE L1 6 1211 -5235 183 100 0 0 chr17 57515962 57515992 -27922488 + (CAA)n Simple_repeat Simple_repeat 1 30 0 26764 139 17 14 chr17 57515992 57518351 -27920129 + L1PA8A LINE L1 1211 3562 -2884 2398 100 0 3 chr17 57518351 57518662 -27919818 + AluSq SINE Alu 1 310 -3 26764 139 17 14 chr17 57518662 57521443 -27917037 + L1PA8A LINE L1 3562 6428 -18 7807 117 15 65 chr17 57521447 57522124 -27916356 + Tigger1 DNA MER2_type 799 1375 -1043 2107 123 3 0 chr17 57522124 57522417 -27916063 - AluSx SINE Alu -18 294 1 7807 117 15 65 chr17 57522417 57523098 -27915382 + Tigger1 DNA MER2_type 1375 2089 -329 2847 199 7 7 chr17 57523099 57523683 -27914797 - L1PA16 LINE L1 -1007 5139 4556 * 3095 137 18 20 chr17 57523679 57524313 -27914167 + L1PA16 LINE L1 5139 5769 -387 235 196 0 0 chr17 57524313 57524369 -27914111 - LTR66 LTR ERVL -166 444 389 306 167 0 0 chr17 57524390 57524450 -27914030 + (CA)n Simple_repeat Simple_repeat 1 60 0 2120 169 5 20 chr17 57524474 57524864 -27913616 + L1PA16 LINE L1 5783 6166 0 1762 120 50 101 chr17 57524865 57525015 -27913465 + Tigger1 DNA MER2_type 2080 2236 -182 1582 163 94 0 chr17 57525015 57525291 -27913189 - AluJb SINE Alu -10 302 1 1762 120 50 101 chr17 57525291 57525497 -27912983 + Tigger1 DNA MER2_type 2236 2418 0 189 308 33 44 chr17 57525516 57525607 -27912873 + MIR SINE MIR 72 161 -101 1566 118 5 8 chr17 57525609 57525871 -27912609 - L1P4 LINE L1 -426 5735 5472 852 203 90 0 chr17 57525868 57526045 -27912435 + L1PB3 LINE L1 5957 6149 -5 * 3595 115 11 11 chr17 57526092 57526633 -27911847 + L1MA3 LINE L1 5478 6018 -287 896 124 0 0 chr17 57526638 57526764 -27911716 + L1MA3 LINE L1 6177 6305 0 206 218 18 18 chr17 57526829 57526884 -27911596 + (TTA)n Simple_repeat Simple_repeat 1 55 0 530 239 3 186 chr17 57526967 57527273 -27911207 + MIR SINE MIR 13 262 0 12659 27 0 0 chr17 57527686 57529151 -27909329 - L1PA2 LINE L1 -1341 4805 3341 8326 17 0 0 chr17 57529151 57530526 -27907954 + L1PA2 LINE L1 4777 6151 -4 219 69 0 0 chr17 57532924 57532953 -27905527 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 222 37 0 0 chr17 57533651 57533678 -27904802 + (CTG)n Simple_repeat Simple_repeat 2 28 0 643 301 36 10 chr17 57534195 57534391 -27904089 + MIR SINE MIR 47 247 -15 261 252 136 48 chr17 57535413 57535516 -27902964 + MIR SINE MIR 150 261 -1 497 268 35 0 chr17 57535555 57535697 -27902783 - MIR SINE MIR -18 244 98 * 3079 224 48 146 chr17 57535684 57537148 -27901332 + L2 LINE L2 1409 3015 -298 2131 102 6 25 chr17 57537148 57537462 -27901018 + AluSx SINE Alu 2 309 -3 3079 224 48 146 chr17 57537462 57537857 -27900623 + L2 LINE L2 3015 3045 -268 2303 110 0 0 chr17 57537857 57538181 -27900299 + AluSq SINE Alu 1 324 0 3079 224 48 146 chr17 57538181 57538427 -27900053 + L2 LINE L2 3045 3313 0 240 363 39 20 chr17 57538426 57538528 -27899952 - MIR SINE MIR -85 123 20 * 435 327 5 44 chr17 57539127 57539309 -27899171 + MIR3 SINE MIR 20 195 -13 651 350 52 37 chr17 57539448 57539797 -27898683 - L2 LINE L2 -18 3254 2901 423 269 37 15 chr17 57540234 57540368 -27898112 + MIR SINE MIR 124 260 -2 187 286 14 57 chr17 57541310 57541380 -27897100 + L2 LINE L2 3246 3312 -1 1760 110 45 17 chr17 57542056 57542348 -27896132 - L1MA5A LINE L1 -6 6291 5992 753 155 17 0 chr17 57542498 57542614 -27895866 - AluJo SINE Alu -176 136 19 324 287 60 60 chr17 57542883 57543033 -27895447 - MIR SINE MIR -34 228 79 228 286 0 0 chr17 57543639 57543695 -27894785 + L2 LINE L2 3258 3313 0 1473 209 202 44 chr17 57544721 57545261 -27893219 + MLT1E2 LTR MaLR 1 625 -1 247 346 98 56 chr17 57545522 57545736 -27892744 + L2 LINE L2 3045 3267 -5 2093 112 35 0 chr17 57546680 57546965 -27891515 + AluSx SINE Alu 1 295 -17 2505 266 164 38 chr17 57547053 57548428 -27890052 + L2 LINE L2 1545 3091 -222 191 281 47 16 chr17 57549100 57549164 -27889316 + MER5A DNA MER1_type 108 173 -16 1034 237 9 26 chr17 57549602 57549830 -27888650 - MER58A DNA MER1_type 0 224 1 249 244 99 76 chr17 57550391 57550446 -27888034 - MIR SINE MIR -10 252 200 403 269 236 5 chr17 57550446 57550658 -27887822 - MIR SINE MIR 0 262 2 249 244 99 76 chr17 57550658 57550676 -27887804 - MIR SINE MIR -62 200 184 360 0 0 0 chr17 57550676 57550716 -27887764 + (CA)n Simple_repeat Simple_repeat 1 40 0 249 244 99 76 chr17 57550716 57550772 -27887708 - MIR SINE MIR -78 184 119 225 313 23 47 chr17 57550857 57550985 -27887495 + MIR SINE MIR 67 191 -71 474 382 5 11 chr17 57551042 57551228 -27887252 + MIR SINE MIR 8 192 -70 500 349 70 8 chr17 57552388 57552629 -27885851 - MIR SINE MIR -1 261 6 1446 181 28 50 chr17 57553564 57553885 -27884595 - L1MC2 LINE L1 -150 6194 5881 246 62 0 0 chr17 57554153 57554185 -27884295 + (TCCA)n Simple_repeat Simple_repeat 2 33 0 292 297 65 39 chr17 57554371 57554526 -27883954 - L1MC2 LINE L1 -345 5829 5671 267 348 62 19 chr17 57555272 57555433 -27883047 - MIR SINE MIR -14 248 81 242 304 11 11 chr17 57555640 57555732 -27882748 - MER20B DNA MER1_type -604 179 88 231 234 71 26 chr17 57555770 57555874 -27882606 - MIR SINE MIR -56 152 43 224 234 0 47 chr17 57555832 57555896 -27882584 + MER5B DNA MER1_type 5 65 -113 * 399 320 174 5 chr17 57555896 57556115 -27882365 + MIR SINE MIR 7 262 0 498 308 149 14 chr17 57556435 57556656 -27881824 + MIR SINE MIR 6 256 -6 326 273 97 67 chr17 57557275 57557440 -27881040 - MIR SINE MIR -46 216 47 1998 171 22 25 chr17 57557447 57557466 -27881014 - MLT1A1 LTR MaLR -3 362 344 3092 178 21 43 chr17 57557466 57557504 -27880976 - MLT2B3 LTR ERVL -3 551 514 333 0 0 0 chr17 57557504 57557541 -27880939 + (CA)n Simple_repeat Simple_repeat 1 37 0 3092 178 21 43 chr17 57557541 57558065 -27880415 - MLT2B3 LTR ERVL -40 514 1 1998 171 22 25 chr17 57558065 57558408 -27880072 - MLT1A1 LTR MaLR -21 344 1 549 281 71 86 chr17 57558480 57558656 -27879824 + MLT1I LTR MaLR 7 184 -225 1107 226 37 5 chr17 57558656 57558873 -27879607 + MER58A DNA MER1_type 1 224 0 549 281 71 86 chr17 57558873 57559105 -27879375 + MLT1I LTR MaLR 184 409 0 2109 137 0 0 chr17 57560396 57560702 -27877778 - AluSx SINE Alu -6 306 1 201 108 0 0 chr17 57561826 57561863 -27876617 + (CA)n Simple_repeat Simple_repeat 2 38 0 274 267 70 128 chr17 57562073 57562128 -27876352 + MER5B DNA MER1_type 9 66 -112 504 0 0 0 chr17 57562128 57562184 -27876296 + (GAAA)n Simple_repeat Simple_repeat 1 56 0 274 267 70 128 chr17 57562184 57562300 -27876180 + MER5B DNA MER1_type 66 170 -8 413 267 53 19 chr17 57562836 57563042 -27875438 + L1ME3 LINE L1 1248 1460 -4936 382 285 137 38 chr17 57563184 57563822 -27874658 + L1ME3 LINE L1 1684 2352 -3863 802 226 82 19 chr17 57563825 57564082 -27874398 + L1ME2 LINE L1 5630 5902 -262 * 1354 254 61 81 chr17 57564073 57564344 -27874136 + L1ME3 LINE L1 3937 4212 -2003 337 87 0 0 chr17 57564344 57564390 -27874090 - MADE1 DNA Mariner -6 74 29 1354 254 61 81 chr17 57564390 57564914 -27873566 + L1ME3 LINE L1 4212 4760 -1455 1634 255 81 73 chr17 57564955 57565166 -27873314 + L1ME3 LINE L1 4725 4933 -1298 2101 132 13 0 chr17 57565166 57565470 -27873010 - AluSx SINE Alu -4 308 1 1634 255 81 73 chr17 57565470 57566574 -27871906 + L1ME3 LINE L1 4933 6042 -189 2613 150 44 0 chr17 57566574 57566987 -27871493 + MSTB1 LTR MaLR 1 431 -1 1634 255 81 73 chr17 57566987 57567151 -27871329 + L1ME3 LINE L1 6042 6203 -28 382 236 19 75 chr17 57568193 57568299 -27870181 - MER5A DNA MER1_type -7 182 83 23 33 0 0 chr17 57568724 57568754 -27869726 + AT_rich Low_complexity Low_complexity 1 30 0 248 70 23 0 chr17 57571259 57571302 -27867178 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 44606 38 1 13 chr17 57571302 57577519 -27860961 - L1PA3 LINE L1 -6 6149 9 576 209 108 0 chr17 57577969 57578117 -27860363 - MER103 DNA DNA 0 166 3 394 278 0 0 chr17 57578470 57578560 -27859920 - MER68 LTR ERV1 -7 555 466 * 1620 206 65 6 chr17 57578557 57578878 -27859602 - MER68 LTR ERV1 -218 344 5 313 304 52 102 chr17 57578895 57579375 -27859105 + L1MEd LINE L1 58 513 -5606 330 87 0 0 chr17 57579394 57579440 -27859040 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 227 156 33 11 chr17 57579479 57579569 -27858911 + (TA)n Simple_repeat Simple_repeat 2 93 0 336 238 22 39 chr17 57579589 57579822 -27858658 + (TA)n Simple_repeat Simple_repeat 1 229 0 1158 284 70 49 chr17 57579877 57580626 -27857854 + L1MEd LINE L1 572 1387 -4862 587 111 40 0 chr17 57580617 57580716 -27857764 + L1M4 LINE L1 2931 3033 -3113 * 799 228 242 34 chr17 57580719 57581075 -27857405 + MER69 DNA AcHobo 2086 2515 -11 1582 166 42 18 chr17 57581868 57582151 -27856329 - AluJo SINE Alu -22 290 1 1769 124 4 30 chr17 57583012 57583279 -27855201 + AluSq SINE Alu 1 260 -53 303 317 0 0 chr17 57583382 57583505 -27854975 + A-rich Low_complexity Low_complexity 1 123 0 367 337 107 19 chr17 57584126 57584331 -27854149 - MIR SINE MIR -3 259 37 336 340 106 23 chr17 57585251 57585516 -27852964 + L2 LINE L2 2972 3258 -14 204 373 93 8 chr17 57585776 57585894 -27852586 + L2 LINE L2 3052 3179 -93 324 235 230 68 chr17 57586447 57586628 -27851852 + MIR3 SINE MIR 41 246 -16 500 311 24 0 chr17 57587433 57587600 -27850880 + MER5B DNA MER1_type 7 177 -1 274 323 47 24 chr17 57587691 57587818 -27850662 - L2 LINE L2 -2 3270 3141 1302 131 157 11 chr17 57587862 57587956 -27850524 + L1MA9 LINE L1 5999 6078 -234 1667 177 35 30 chr17 57587956 57588329 -27850151 - THE1C LTR MaLR 0 375 1 1302 131 157 11 chr17 57588329 57588508 -27849972 + L1MA9 LINE L1 6078 6312 0 180 0 0 0 chr17 57589016 57589036 -27849444 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 824 245 0 0 chr17 57589039 57589186 -27849294 - FRAM SINE Alu -30 146 1 3252 264 14 32 chr17 57589268 57590137 -27848343 + L1PA15 LINE L1 1 853 -5934 384 324 71 8 chr17 57590541 57590794 -27847686 - LTR16A1 LTR ERVL -21 436 168 5135 156 50 30 chr17 57591018 57591119 -27847361 - L1MA10 LINE L1 -7 6327 6229 2740 166 2 47 chr17 57591119 57591606 -27846874 + LTR32 LTR ERVL 4 468 -3 5135 156 50 30 chr17 57591606 57592933 -27845547 - L1MA10 LINE L1 -105 6229 4865 290 279 91 35 chr17 57592933 57593113 -27845367 - MIR SINE MIR -50 212 30 1584 162 0 32 chr17 57593264 57593517 -27844963 + AluJb SINE Alu 21 265 -47 2690 107 0 50 chr17 57593579 57593962 -27844518 - THE1B LTR MaLR 0 364 1 5020 215 17 12 chr17 57594846 57596636 -27841844 + L1PA15 LINE L1 1434 3240 -3557 279 215 15 0 chr17 57596637 57596702 -27841778 + MER52A LTR ERV1 1 66 -1689 4396 189 90 38 chr17 57597427 57598443 -27840037 + MER52A LTR ERV1 46 1192 -563 1257 205 81 30 chr17 57598442 57598739 -27839741 + MER52A LTR ERV1 1404 1715 -40 * 12676 206 20 1 chr17 57598759 57602347 -27836133 + L1PA15 LINE L1 3238 6814 -2 185 67 0 67 chr17 57602878 57602908 -27835572 - MIR SINE MIR -145 117 90 236 254 246 29 chr17 57602929 57603067 -27835413 - MIR SINE MIR -9 253 86 2471 198 60 35 chr17 57603141 57603737 -27834743 - L1MC1 LINE L1 -5 7738 6133 195 298 0 0 chr17 57603964 57604011 -27834469 - MIR SINE MIR -8 254 208 523 296 17 29 chr17 57604805 57604977 -27833503 - MIR SINE MIR -74 188 19 922 226 47 38 chr17 57605641 57605853 -27832627 - MER20 DNA MER1_type -2 217 4 372 324 59 12 chr17 57605950 57606120 -27832360 - MIR SINE MIR -38 224 47 469 246 0 25 chr17 57606289 57606411 -27832069 - MIR SINE MIR -113 149 31 24 32 0 0 chr17 57607760 57607791 -27830689 + AT_rich Low_complexity Low_complexity 1 31 0 212 282 155 19 chr17 57607917 57608020 -27830460 - MIR SINE MIR -126 136 20 1846 68 0 0 chr17 57608370 57608631 -27829849 + AluY SINE Alu 72 332 0 187 304 123 36 chr17 57608767 57608905 -27829575 + MIR SINE MIR 85 234 -28 2011 133 105 13 chr17 57609284 57609666 -27828814 - MSTA LTR MaLR -11 417 1 430 305 13 13 chr17 57610374 57610525 -27827955 - MIR SINE MIR -65 197 47 447 301 126 12 chr17 57610566 57610753 -27827727 - MIR SINE MIR -62 146 2 1823 78 41 0 chr17 57611353 57611595 -27826885 - L1PA12 LINE L1 0 6168 5917 213 324 7 76 chr17 57611663 57611808 -27826672 + MIR SINE MIR 17 151 -111 221 252 98 105 chr17 57611896 57612039 -27826441 - MIR SINE MIR -68 194 53 1853 120 0 4 chr17 57612040 57612298 -27826182 + AluSx SINE Alu 35 291 -21 181 300 120 0 chr17 57612624 57612674 -27825806 - L2 LINE L2 -16 3256 3201 360 277 99 62 chr17 57612713 57613010 -27825470 + MLT1J LTR MaLR 8 366 -145 1113 169 13 89 chr17 57613010 57613247 -27825233 + MER20 DNA MER1_type 1 219 0 360 277 99 62 chr17 57613247 57613374 -27825106 + MLT1J LTR MaLR 366 487 -24 187 352 77 11 chr17 57613420 57613511 -27824969 - MIR SINE MIR -147 115 19 2394 156 71 58 chr17 57613662 57614143 -27824337 + L1M3 LINE L1 4759 5281 -887 3961 130 25 36 chr17 57614143 57614775 -27823705 + L1PA16 LINE L1 5533 6157 -9 2394 156 71 58 chr17 57614775 57615077 -27823403 + L1M3 LINE L1 5281 5577 -591 304 355 16 0 chr17 57615084 57615208 -27823272 + L2 LINE L2 2575 2700 -614 1894 171 36 18 chr17 57615209 57615601 -27822879 - L1MA9 LINE L1 -1 6311 5913 248 299 45 85 chr17 57615622 57615846 -27822634 + HAL1 LINE L1 3 217 -2290 902 283 135 51 chr17 57616097 57616955 -27821525 + HAL1 LINE L1 707 1636 -871 324 274 215 0 chr17 57617009 57617144 -27821336 + HAL1 LINE L1 1728 1891 -616 286 229 12 24 chr17 57617278 57617361 -27821119 + HAL1 LINE L1 2078 2159 -348 252 244 78 0 chr17 57617695 57617785 -27820695 + HAL1 LINE L1 2240 2336 -171 533 276 113 25 chr17 57618281 57618484 -27819996 + MIR SINE MIR 23 243 -19 2594 144 186 2 chr17 57619059 57619504 -27818976 - MER1A DNA MER1_type 0 527 1 222 293 158 12 chr17 57619744 57619826 -27818654 - L2 LINE L2 -2917 397 304 22 35 0 0 chr17 57621230 57621259 -27817221 + AT_rich Low_complexity Low_complexity 1 29 0 1455 295 20 5 chr17 57621791 57622181 -27816299 - LTR16C LTR ERVL -8 483 88 864 363 29 24 chr17 57622287 57622868 -27815612 - ERVL LTR ERVL -434 5330 4747 400 393 49 0 chr17 57622928 57623193 -27815287 - ERVL LTR ERVL -875 4610 4333 677 177 16 8 chr17 57623200 57623324 -27815156 - MLT1A1 LTR MaLR 0 365 241 189 175 0 0 chr17 57623342 57623382 -27815098 + T-rich Low_complexity Low_complexity 5 44 0 574 113 155 0 chr17 57623419 57623516 -27814964 - L1P3 LINE L1 -5659 802 691 228 164 0 91 chr17 57623516 57623571 -27814909 - MLT1A1 LTR MaLR -288 77 28 * 871 188 134 0 chr17 57623569 57623771 -27814709 - MLT1A1 LTR MaLR -136 229 1 644 390 6 11 chr17 57623833 57624184 -27814296 - ERVL LTR ERVL -1395 4259 3911 287 279 125 22 chr17 57624359 57624495 -27813985 - LTR16C LTR ERVL -79 412 263 891 230 56 4 chr17 57624505 57624775 -27813705 + AluSc SINE Alu 1 284 -15 1197 159 14 5 chr17 57624888 57625096 -27813384 + AluSg/x SINE Alu 88 297 -15 246 299 30 0 chr17 57625103 57625170 -27813310 - LTR16C LTR ERVL -238 253 185 23 0 0 0 chr17 57625793 57625816 -27812664 + AT_rich Low_complexity Low_complexity 1 23 0 2753 118 11 3 chr17 57626333 57626705 -27811775 - THE1C LTR MaLR 0 375 1 261 0 0 0 chr17 57626930 57626959 -27811521 + (TG)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr17 57627603 57627628 -27810852 + (A)n Simple_repeat Simple_repeat 1 25 0 3555 49 2 0 chr17 57627689 57628117 -27810363 - L1PA7 LINE L1 -227 5927 5499 1835 56 4 30 chr17 57628117 57628347 -27810133 + L1PA7 LINE L1 5930 6154 0 247 376 223 7 chr17 57628537 57628819 -27809661 + L2 LINE L2 2497 2839 -475 297 308 145 0 chr17 57628924 57629096 -27809384 + L2 LINE L2 3112 3308 -5 925 208 6 0 chr17 57629385 57629568 -27808912 + AluJo SINE Alu 118 301 -11 267 294 54 0 chr17 57629750 57629842 -27808638 - MIR3 SINE MIR -24 184 88 2324 112 50 31 chr17 57629903 57630260 -27808220 + THE1B LTR MaLR 1 364 0 11893 107 8 16 chr17 57630260 57631853 -27806627 + THE1B-int LTR MaLR 1 1580 0 2323 117 35 46 chr17 57631853 57632221 -27806259 + THE1B LTR MaLR 1 364 0 264 250 29 29 chr17 57632337 57632441 -27806039 - MER5A DNA MER1_type -85 104 1 329 283 34 57 chr17 57635772 57635949 -27802531 + MIR SINE MIR 56 228 -34 261 344 0 11 chr17 57635956 57636046 -27802434 + L2 LINE L2 1851 1939 -1375 227 194 90 60 chr17 57636099 57636166 -27802314 + MLT1J2 LTR MaLR 68 136 -314 459 289 81 13 chr17 57636357 57636506 -27801974 + MLT1I LTR MaLR 232 390 -19 568 337 50 39 chr17 57636513 57636970 -27801510 + L2 LINE L2 1936 2397 -917 244 263 53 68 chr17 57636999 57637132 -27801348 - MLT1K LTR MaLR -8 580 450 542 285 146 56 chr17 57638051 57638754 -27799726 - L2 LINE L2 0 3313 2543 2616 109 22 3 chr17 57638784 57639141 -27799339 + THE1B LTR MaLR 1 364 0 330 395 76 35 chr17 57639232 57639576 -27798904 - L2 LINE L2 0 3272 2915 5513 151 20 30 chr17 57639739 57640767 -27797713 - L1MA8 LINE L1 -1 6290 5273 243 79 0 0 chr17 57640833 57640871 -27797609 + (T)n Simple_repeat Simple_repeat 1 38 0 233 357 47 23 chr17 57641074 57641203 -27797277 + MIR SINE MIR 21 152 -110 906 308 86 46 chr17 57641206 57641790 -27796690 - MLT1L LTR MaLR -2 613 7 1282 185 26 55 chr17 57641866 57642174 -27796306 - AluJb SINE Alu -13 299 1 4269 156 27 58 chr17 57643662 57644569 -27793911 + L1MA9 LINE L1 5176 6110 -202 1899 183 38 30 chr17 57644569 57644941 -27793539 + THE1C LTR MaLR 1 375 0 9919 132 55 16 chr17 57644943 57646461 -27792019 + THE1C-int LTR MaLR 3 1580 0 1827 165 69 39 chr17 57646461 57646825 -27791655 + THE1C LTR MaLR 1 375 0 4269 156 27 58 chr17 57646825 57646981 -27791499 + L1MA9 LINE L1 6109 6311 -1 2171 135 67 14 chr17 57647228 57647584 -27790896 + THE1C LTR MaLR 1 375 0 515 362 88 23 chr17 57647591 57648077 -27790403 + L2 LINE L2 448 965 -2349 185 314 36 21 chr17 57648087 57648227 -27790253 + L2 LINE L2 1523 1664 -1650 600 298 29 63 chr17 57648254 57648570 -27789910 + L2 LINE L2 3009 3313 0 326 203 0 0 chr17 57648872 57648931 -27789549 - MER3 DNA MER1_type -144 65 7 764 333 119 7 chr17 57648962 57649409 -27789071 + L2 LINE L2 2033 2529 -785 622 180 7 7 chr17 57649454 57649604 -27788876 + (CA)n Simple_repeat Simple_repeat 2 151 0 272 282 109 102 chr17 57649824 57650303 -27788177 + L2 LINE L2 2831 3312 -1 195 347 28 0 chr17 57650470 57650542 -27787938 + MIR SINE MIR 106 179 -83 2302 104 0 19 chr17 57650674 57650992 -27787488 - AluSp SINE Alu -1 312 1 366 290 45 19 chr17 57651207 57651362 -27787118 + MIR SINE MIR 66 224 -38 26 30 0 0 chr17 57651508 57651541 -27786939 + AT_rich Low_complexity Low_complexity 1 33 0 2089 130 0 17 chr17 57653156 57653457 -27785023 + AluSx SINE Alu 5 300 -12 185 333 0 91 chr17 57653661 57653760 -27784720 + MIR SINE MIR 12 101 -161 432 0 0 0 chr17 57655143 57655191 -27783289 + (CA)n Simple_repeat Simple_repeat 2 49 0 190 114 23 23 chr17 57656080 57656096 -27782384 + (TA)n Simple_repeat Simple_repeat 2 17 -28 2196 108 0 10 chr17 57656096 57656393 -27782087 + AluSp SINE Alu 2 295 -18 190 114 23 23 chr17 57656393 57656420 -27782060 + (TA)n Simple_repeat Simple_repeat 16 45 0 2314 79 4 0 chr17 57656803 57657135 -27781345 + AluY SINE Alu 1 333 0 425 313 23 0 chr17 57657200 57657328 -27781152 - MER94 DNA DNA 0 134 4 465 286 60 22 chr17 57659149 57659282 -27779198 + MIR SINE MIR 12 155 -107 2447 78 0 13 chr17 57659282 57659588 -27778892 + AluY SINE Alu 1 302 -9 465 286 60 22 chr17 57659588 57659636 -27778844 + MIR SINE MIR 155 200 -62 982 275 0 0 chr17 57660069 57660280 -27778200 + MER58A DNA MER1_type 12 222 -2 376 364 22 26 chr17 57660443 57660671 -27777809 + MIR SINE MIR 26 252 -10 186 293 85 12 chr17 57662510 57662592 -27775888 - L2 LINE L2 -33 3280 3193 2194 100 19 13 chr17 57662704 57663013 -27775467 - AluY SINE Alu 0 311 1 201 345 23 0 chr17 57663305 57663392 -27775088 - MIR SINE MIR -60 148 60 564 221 31 36 chr17 57664552 57664730 -27773750 + MER5B DNA MER1_type 5 169 -9 288 0 0 0 chr17 57665090 57665122 -27773358 + (TG)n Simple_repeat Simple_repeat 2 33 0 248 270 14 0 chr17 57665126 57665200 -27773280 - MIR SINE MIR -109 153 79 1882 166 10 7 chr17 57665202 57665509 -27772971 + AluSx SINE Alu 1 308 -4 1578 172 68 101 chr17 57666121 57666604 -27771876 + MLT1C LTR MaLR 1 467 0 1775 139 201 8 chr17 57717957 57718316 -27720164 + MSTA LTR MaLR 1 428 0 985 123 6 0 chr17 57718386 57718548 -27719932 + L1MA7 LINE L1 6123 6285 -6 333 302 66 0 chr17 57718774 57718880 -27719600 - L2 LINE L2 -2 3270 3158 195 100 0 0 chr17 57719886 57719916 -27718564 + (T)n Simple_repeat Simple_repeat 1 30 0 2309 119 3 0 chr17 57720253 57720565 -27717915 - AluSq SINE Alu 0 313 1 284 167 30 0 chr17 57721115 57721181 -27717299 + A-rich Low_complexity Low_complexity 2 69 0 315 0 0 0 chr17 57723327 57723362 -27715118 + (TG)n Simple_repeat Simple_repeat 1 35 0 198 0 0 0 chr17 57723521 57723543 -27714937 + (A)n Simple_repeat Simple_repeat 1 22 0 312 27 0 0 chr17 57723928 57723965 -27714515 + (CA)n Simple_repeat Simple_repeat 2 38 0 750 343 139 35 chr17 57724457 57725343 -27713137 + L3 LINE CR1 20 997 -580 2050 121 52 0 chr17 57725515 57725805 -27712675 - AluSx SINE Alu -7 305 1 478 287 39 16 chr17 57725994 57726123 -27712357 - L2 LINE L2 0 3272 3141 451 281 92 103 chr17 57726279 57726639 -27711841 + L2 LINE L2 2916 3271 -1 392 267 43 19 chr17 57726921 57727082 -27711398 + Charlie8 DNA MER1_type 71 235 -2182 2557 179 8 0 chr17 57727128 57727619 -27710861 - L1MB7 LINE L1 -19 6165 5671 222 273 134 51 chr17 57727948 57728164 -27710316 + MIR SINE MIR 2 235 -27 5020 86 19 9 chr17 57728699 57729396 -27709084 + L1PA10 LINE L1 5462 6165 -3 660 234 142 5 chr17 57729427 57729632 -27708848 - MIR SINE MIR 0 262 30 229 305 0 0 chr17 57729912 57729971 -27708509 + G-rich Low_complexity Low_complexity 6 64 0 196 203 43 58 chr17 57730803 57730872 -27707608 + MIR3 SINE MIR 6 73 -135 361 320 4 69 chr17 57731010 57731093 -27707387 + MIR SINE MIR 6 93 -169 528 220 33 66 chr17 57731093 57731275 -27707205 - MER69A DNA AcHobo -1 176 1 361 320 4 69 chr17 57731275 57731316 -27707164 + MIR SINE MIR 93 135 -127 2078 126 10 3 chr17 57731316 57731789 -27706691 - AluSx SINE Alu 0 475 1 361 320 4 69 chr17 57731789 57731887 -27706593 + MIR SINE MIR 135 212 -50 183 246 0 0 chr17 57731891 57731948 -27706532 + (CA)n Simple_repeat Simple_repeat 2 58 0 1908 126 16 45 chr17 57732052 57732362 -27706118 - AluSx SINE Alu -11 301 1 290 222 0 12 chr17 57733104 57733185 -27705295 + CT-rich Low_complexity Low_complexity 1 80 0 243 382 71 53 chr17 57734054 57734489 -27703991 - L2 LINE L2 -19 3253 2811 467 318 82 35 chr17 57734679 57734994 -27703486 - L2 LINE L2 -833 2481 2152 1306 231 192 20 chr17 57735331 57735842 -27702638 - L2 LINE L2 0 3313 2719 36 0 0 0 chr17 57735877 57735913 -27702567 + AT_rich Low_complexity Low_complexity 1 36 0 291 130 0 0 chr17 57735913 57735959 -27702521 - MER103 DNA DNA -115 51 6 999 243 0 0 chr17 57736033 57736222 -27702258 - MER5A DNA MER1_type 0 189 1 635 350 68 58 chr17 57737827 57738776 -27699704 - L2 LINE L2 -18 3254 2305 666 270 117 17 chr17 57739159 57739389 -27699091 - MIR SINE MIR -7 255 3 23 0 0 0 chr17 57739692 57739715 -27698765 + AT_rich Low_complexity Low_complexity 1 23 0 240 364 40 0 chr17 57742526 57742651 -27695829 + MIR SINE MIR 24 157 -63 292 322 98 35 chr17 57742680 57742823 -27695657 - L2 LINE L2 0 3272 3121 217 320 74 66 chr17 57743018 57743274 -27695206 - L2 LINE L2 -343 2971 2714 675 233 17 51 chr17 57743481 57743657 -27694823 + MIR SINE MIR 80 249 -13 632 140 0 19 chr17 57744090 57744197 -27694283 + FLAM_A SINE Alu 38 142 0 519 326 21 0 chr17 57744213 57744357 -27694123 + MIR3 SINE MIR 54 200 -8 1254 199 118 92 chr17 57744844 57745336 -27693144 - MLT1D LTR MaLR 0 505 1 187 284 200 21 chr17 57745470 57745565 -27692915 - L2 LINE L2 0 3272 3161 469 216 35 5 chr17 57746228 57746361 -27692119 - MIR3 SINE MIR -9 199 63 433 262 45 74 chr17 57746923 57747149 -27691331 - MIR SINE MIR -1 261 42 540 264 57 9 chr17 57748480 57748650 -27689830 + MIR3 SINE MIR 2 180 -63 324 307 44 9 chr17 57749068 57749182 -27689298 - L2 LINE L2 -219 3053 2936 613 325 268 21 chr17 57749342 57750522 -27687958 - L2 LINE L2 -148 3165 1705 387 0 0 0 chr17 57751916 57751959 -27686521 + (TA)n Simple_repeat Simple_repeat 1 43 0 1078 142 12 0 chr17 57753086 57753255 -27685225 - AluSq SINE Alu -13 300 130 946 104 0 0 chr17 57753381 57753506 -27684974 - AluSq SINE Alu -188 125 1 280 352 9 19 chr17 57753564 57753669 -27684811 - MIR SINE MIR -89 119 16 263 299 11 23 chr17 57753859 57753946 -27684534 - L2 LINE L2 -1 3271 3186 274 278 21 149 chr17 57754095 57754289 -27684191 - L2 LINE L2 -70 3202 3034 1366 201 138 42 chr17 57754514 57754571 -27683909 + MLT1D LTR MaLR 15 65 -440 191 86 0 29 chr17 57754571 57754606 -27683874 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1531 53 0 0 chr17 57754607 57754795 -27683685 - L1PA5 LINE L1 -11 6143 5956 1366 201 138 42 chr17 57754795 57755183 -27683297 + MLT1D LTR MaLR 64 505 0 306 371 148 5 chr17 57755343 57755553 -27682927 + MIR SINE MIR 23 262 0 467 319 60 34 chr17 57756254 57756552 -27681928 + L2 LINE L2 2926 3231 -82 253 320 141 15 chr17 57756683 57756889 -27681591 + L2 LINE L2 2605 2836 -478 326 200 108 23 chr17 57756902 57757032 -27681448 - L1MD3 LINE L1 0 7995 7855 295 245 9 47 chr17 57757384 57757465 -27681015 - L1MC/D LINE L1 -1971 5837 5761 955 260 68 64 chr17 57757465 57757962 -27680518 - MLT1J LTR MaLR -2 509 11 806 195 53 6 chr17 57758545 57758714 -27679766 - MER45A DNA AcHobo 0 178 2 440 285 36 7 chr17 57761295 57761432 -27677048 - MIR3 SINE MIR -15 193 53 191 125 25 0 chr17 57762327 57762367 -27676113 + T-rich Low_complexity Low_complexity 2 42 0 276 30 0 0 chr17 57764546 57764579 -27673901 + (TG)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr17 57767444 57767465 -27671015 + (A)n Simple_repeat Simple_repeat 1 21 0 361 259 19 28 chr17 57769079 57769187 -27669293 - MIR SINE MIR -109 153 47 245 264 11 11 chr17 57769468 57769555 -27668925 + (CA)n Simple_repeat Simple_repeat 2 88 0 483 274 119 30 chr17 57770426 57770627 -27667853 + MIR SINE MIR 8 226 -36 22 80 0 0 chr17 57770941 57770991 -27667489 + AT_rich Low_complexity Low_complexity 1 50 0 300 247 155 10 chr17 57771255 57771352 -27667128 + MER81 DNA DNA 1 111 -3 198 118 0 0 chr17 57772073 57772107 -27666373 + (CA)n Simple_repeat Simple_repeat 2 35 0 2996 40 3 0 chr17 57772241 57772614 -27665866 + L1PA5 LINE L1 5784 6157 0 2397 103 0 0 chr17 57772677 57772988 -27665492 + AluY SINE Alu 1 311 0 233 250 69 78 chr17 57773069 57773185 -27665295 + L1M1 LINE L1 5644 5758 -547 226 313 160 7 chr17 57773156 57773306 -27665174 + L1MC/D LINE L1 5728 5900 -1908 * 312 27 0 0 chr17 57773364 57773398 -27665082 + (TG)n Simple_repeat Simple_repeat 1 71 0 312 27 0 0 chr17 57773398 57773435 -27665045 + (TG)n Simple_repeat Simple_repeat 2 38 0 214 337 20 10 chr17 57773971 57774072 -27664408 + L3b LINE CR1 1394 1495 -88 338 244 185 59 chr17 57774230 57774554 -27663926 + L3 LINE CR1 641 1005 -572 260 172 0 52 chr17 57774580 57774638 -27663842 - L2 LINE L2 -1 3271 3217 369 324 92 48 chr17 57774762 57774910 -27663570 + L3 LINE CR1 1167 1307 -270 2770 156 102 12 chr17 57774910 57775429 -27663051 + MLT1F1 LTR MaLR 2 567 0 369 324 92 48 chr17 57775429 57775616 -27662864 + L3 LINE CR1 1307 1517 -60 451 281 12 43 chr17 57777495 57777659 -27660821 - MIR SINE MIR -74 188 30 226 271 83 31 chr17 57777723 57777819 -27660661 + MIR SINE MIR 81 181 -81 341 216 80 0 chr17 57779561 57779649 -27658831 - MIR SINE MIR -84 178 84 395 228 59 0 chr17 57779651 57779752 -27658728 + MIR SINE MIR 137 243 -19 231 232 172 30 chr17 57779872 57779971 -27658509 + L2 LINE L2 3159 3271 -1 222 207 0 0 chr17 57780335 57780393 -27658087 + (CA)n Simple_repeat Simple_repeat 1 58 0 547 252 0 0 chr17 57780651 57780774 -27657706 - L2 LINE L2 -1 3312 3190 453 180 0 0 chr17 57781256 57781345 -27657135 + CT-rich Low_complexity Low_complexity 2 90 0 196 211 0 77 chr17 57782113 57782165 -27656315 - L2 LINE L2 -8 3264 3217 862 249 82 20 chr17 57782397 57782642 -27655838 + MIR SINE MIR 2 261 -1 445 261 8 74 chr17 57783374 57783465 -27655015 - MIR3 SINE MIR 0 262 167 807 154 0 0 chr17 57783465 57783588 -27654892 - FLAM_A SINE Alu -10 123 1 445 261 8 74 chr17 57783588 57783770 -27654710 - MIR3 SINE MIR -95 167 15 1706 192 6 6 chr17 57784578 57784915 -27653565 + AluJo SINE Alu 1 312 0 457 270 0 9 chr17 57785540 57785651 -27652829 + MLT1K LTR MaLR 2 111 -477 771 237 89 25 chr17 57785661 57785897 -27652583 - MIR SINE MIR 0 262 12 446 311 218 26 chr17 57785897 57786283 -27652197 + MLT1K LTR MaLR 107 566 -22 1960 119 28 7 chr17 57786598 57786883 -27651597 + AluSx SINE Alu 5 295 -17 467 296 187 14 chr17 57787014 57787362 -27651118 - LTR67 LTR ERVL -19 538 131 1014 250 120 58 chr17 57787694 57788222 -27650258 - MLT1H1 LTR MaLR 0 555 1 365 327 47 36 chr17 57788235 57788475 -27650005 - L2 LINE L2 -189 3083 2837 2282 124 0 0 chr17 57788475 57788781 -27649699 + AluSx SINE Alu 1 306 -6 365 327 47 36 chr17 57788781 57788868 -27649612 - L2 LINE L2 -435 2837 2752 409 259 19 9 chr17 57789051 57789159 -27649321 - L2 LINE L2 -333 2980 2872 576 247 45 13 chr17 57789381 57789585 -27648895 + L1ME LINE L1 5556 5777 -385 21 36 0 0 chr17 57789844 57789872 -27648608 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr17 57790139 57790165 -27648315 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 1718 157 35 21 chr17 57790213 57790500 -27647980 + AluJb SINE Alu 6 296 -16 2268 116 3 6 chr17 57791211 57791522 -27646958 - AluSx SINE Alu -2 310 1 249 187 122 81 chr17 57791683 57791806 -27646674 + L2 LINE L2 3122 3249 -23 1515 211 146 25 chr17 57791915 57792346 -27646134 - MLT1D LTR MaLR 0 505 23 2351 52 0 0 chr17 57792437 57792706 -27645774 - AluY SINE Alu -13 298 30 207 100 0 0 chr17 57792727 57792757 -27645723 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 478 201 24 12 chr17 57794194 57794358 -27644122 + GA-rich Low_complexity Low_complexity 4 169 0 275 250 48 71 chr17 57794388 57794472 -27644008 + L2 LINE L2 3160 3241 -31 360 263 194 11 chr17 57794629 57794815 -27643665 - MIR SINE MIR -6 256 37 304 226 0 0 chr17 57795741 57795803 -27642677 - MIR SINE MIR -111 97 36 390 304 6 61 chr17 57796082 57796263 -27642217 + MIR3 SINE MIR 12 182 -26 1988 129 3 3 chr17 57796454 57796748 -27641732 + AluSg SINE Alu 1 294 -16 1289 391 0 26 chr17 57796760 57797067 -27641413 + AluJb SINE Alu 1 299 -13 337 321 18 0 chr17 57797758 57797870 -27640610 + L2 LINE L2 3195 3308 -5 219 231 0 0 chr17 57797872 57797911 -27640569 + polypurine Low_complexity Low_complexity 3 41 0 1600 265 69 9 chr17 57797912 57798349 -27640131 + LTR16B LTR ERVL 2 464 0 569 316 38 11 chr17 57798507 57798774 -27639706 + LTR33 LTR ERVL 28 277 -246 216 0 0 0 chr17 57798939 57798963 -27639517 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 417 229 88 93 chr17 57799114 57799243 -27639237 + MLT1H LTR MaLR 346 475 -74 1960 158 3 3 chr17 57799243 57799546 -27638934 + AluSx SINE Alu 1 303 -9 417 229 88 93 chr17 57799546 57799621 -27638859 + MLT1H LTR MaLR 475 549 0 1920 145 178 8 chr17 57800093 57800459 -27638021 - MSTA LTR MaLR 0 428 1 816 282 71 7 chr17 57800732 57801213 -27637267 - MLT1H1 LTR MaLR -6 549 1 1452 264 84 43 chr17 57801286 57801794 -27636686 + Charlie7 DNA MER1_type 68 608 -2004 1682 198 7 0 chr17 57801794 57802092 -27636388 + AluSx SINE Alu 1 300 -12 1452 264 84 43 chr17 57802092 57802211 -27636269 + Charlie7 DNA MER1_type 608 721 -1891 417 214 34 78 chr17 57802203 57802409 -27636071 + Charlie7 DNA MER1_type 2416 2612 0 * 417 274 44 7 chr17 57802913 57803048 -27635432 + L1ME4a LINE L1 5548 5687 -2121 675 186 8 0 chr17 57803144 57803262 -27635218 + FLAM_A SINE Alu 1 119 -14 21 0 0 0 chr17 57803275 57803296 -27635184 + AT_rich Low_complexity Low_complexity 1 21 0 491 276 29 91 chr17 57803634 57804018 -27634462 + L1ME4a LINE L1 5688 6047 -74 459 266 26 154 chr17 57804480 57804792 -27633688 + L2 LINE L2 3001 3272 0 335 293 64 120 chr17 57805032 57805287 -27633193 - MLT1K LTR MaLR -108 480 249 1868 161 21 0 chr17 57805287 57805578 -27632902 + AluJo SINE Alu 1 297 -15 335 293 64 120 chr17 57805578 57805681 -27632799 - MLT1K LTR MaLR -339 249 142 342 286 108 30 chr17 57806959 57807162 -27631318 + MIR SINE MIR 32 250 -12 234 345 17 17 chr17 57807585 57807704 -27630776 - MIR3 SINE MIR -52 156 38 955 144 72 0 chr17 57807763 57807930 -27630550 + MER82 DNA MER2_type 10 188 -465 2709 169 8 46 chr17 57807931 57808428 -27630052 + MLT2B1 LTR ERVL 3 480 -40 219 114 0 0 chr17 57808440 57808475 -27630005 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr17 57808510 57808531 -27629949 + AT_rich Low_complexity Low_complexity 1 21 0 303 105 18 18 chr17 57808545 57808602 -27629878 + MLT2B1 LTR ERVL 464 520 0 725 268 40 22 chr17 57808609 57808833 -27629647 + HERVL-B1 LTR ERVL 4 231 -5423 985 159 80 0 chr17 57808836 57808987 -27629493 + MER21B LTR ERV1 328 490 -373 28446 151 27 39 chr17 57809344 57810068 -27628412 + HERVL-B1 LTR ERVL 239 970 -4794 7117 111 47 33 chr17 57810068 57810753 -27627727 + Tigger3b DNA MER2_type 1 712 -2316 1949 133 36 0 chr17 57810753 57811054 -27627426 + AluSx SINE Alu 1 312 0 7117 111 47 33 chr17 57811054 57811582 -27626898 + Tigger3b DNA MER2_type 712 1231 0 28446 151 27 39 chr17 57811582 57815713 -27622767 + HERVL-B1 LTR ERVL 970 5039 -725 794 203 29 38 chr17 57815713 57815928 -27622552 + MLT2B1 LTR ERVL 208 463 -57 216 0 0 0 chr17 57815928 57815952 -27622528 + (TCTA)n Simple_repeat Simple_repeat 1 24 0 794 203 29 38 chr17 57815952 57816010 -27622470 + MLT2B1 LTR ERVL 463 520 0 * 1930 233 78 14 chr17 57816010 57816452 -27622028 + MER82 DNA MER2_type 183 653 0 566 210 34 0 chr17 57816452 57816569 -27621911 + MER94 DNA DNA 14 134 0 329 343 116 35 chr17 57818186 57818384 -27620096 - MIR SINE MIR -45 217 4 234 318 9 37 chr17 57819194 57819301 -27619179 + MIR SINE MIR 46 149 -113 414 292 77 18 chr17 57819427 57819595 -27618885 - MIR SINE MIR -51 211 34 199 204 0 20 chr17 57819902 57819951 -27618529 - L2 LINE L2 0 3313 3266 557 248 120 12 chr17 57821008 57821250 -27617230 + L1ME LINE L1 5485 5752 -369 685 146 0 77 chr17 57822532 57822662 -27615818 + FLAM_A SINE Alu 1 120 -13 273 167 156 73 chr17 57822711 57822807 -27615673 + L2 LINE L2 3210 3313 0 228 204 161 43 chr17 57823092 57823185 -27615295 + MIR SINE MIR 16 119 -89 416 297 11 54 chr17 57823614 57823799 -27614681 + MIR SINE MIR 86 262 0 1903 139 0 16 chr17 57824106 57824415 -27614065 + AluSx SINE Alu 1 304 -8 1468 185 17 13 chr17 57824457 57824755 -27613725 - AluJb SINE Alu -13 299 1 478 319 28 0 chr17 57824757 57824898 -27613582 + MIR SINE MIR 20 164 -98 275 231 0 31 chr17 57825998 57826063 -27612417 + CT-rich Low_complexity Low_complexity 4 66 0 4202 146 21 17 chr17 57827758 57827903 -27610577 - L1MB3 LINE L1 -1 6182 6039 2630 121 0 0 chr17 57827903 57828267 -27610213 + THE1B LTR MaLR 1 364 0 4202 146 21 17 chr17 57828267 57828873 -27609607 - L1MB3 LINE L1 -144 6039 5428 473 323 198 0 chr17 57829220 57829412 -27609068 + MIR SINE MIR 21 250 -12 1732 163 3 3 chr17 57829460 57829763 -27608717 + AluJb SINE Alu 1 303 0 211 306 16 16 chr17 57831171 57831233 -27607247 - L2 LINE L2 -19 3294 3233 196 206 73 29 chr17 57831267 57831335 -27607145 - L2 LINE L2 -1109 2205 2135 22 35 0 0 chr17 57832591 57832620 -27605860 + AT_rich Low_complexity Low_complexity 1 29 0 31 26 0 0 chr17 57832738 57832776 -27605704 + AT_rich Low_complexity Low_complexity 1 38 0 227 276 16 0 chr17 57833399 57833461 -27605019 + MIR SINE MIR 104 165 -58 215 231 0 0 chr17 57833754 57833793 -27604687 + (CA)n Simple_repeat Simple_repeat 1 39 0 2470 62 7 0 chr17 57834300 57834643 -27603837 - AluY SINE Alu 0 345 1 2104 132 0 0 chr17 57834979 57835290 -27603190 + AluSx SINE Alu 1 311 -1 598 65 79 0 chr17 57835957 57836096 -27602384 + (TG)n Simple_repeat Simple_repeat 2 151 0 211 281 0 18 chr17 57836119 57836176 -27602304 + (TG)n Simple_repeat Simple_repeat 2 57 0 324 0 0 0 chr17 57836510 57836546 -27601934 + (TG)n Simple_repeat Simple_repeat 1 36 0 233 258 204 21 chr17 57837542 57837635 -27600845 - MIR3 SINE MIR -90 118 9 427 290 78 31 chr17 57838333 57838526 -27599954 - MIR SINE MIR -36 226 25 1815 117 0 64 chr17 57839623 57839921 -27598559 - AluSx SINE Alu -33 279 1 24 77 0 0 chr17 57840957 57841009 -27597471 + GC_rich Low_complexity Low_complexity 1 52 0 288 77 0 0 chr17 57841218 57841257 -27597223 + (TG)n Simple_repeat Simple_repeat 2 40 0 351 65 0 0 chr17 57841658 57841704 -27596776 + (CCG)n Simple_repeat Simple_repeat 2 47 0 189 0 0 0 chr17 57842015 57842036 -27596444 + (CCG)n Simple_repeat Simple_repeat 3 23 0 21 0 0 0 chr17 57842774 57842795 -27595685 + GC_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr17 57843325 57843351 -27595129 + (T)n Simple_repeat Simple_repeat 1 26 0 204 255 0 0 chr17 57843504 57843551 -27594929 + A-rich Low_complexity Low_complexity 1 47 0 262 262 0 12 chr17 57844993 57845077 -27593403 + CT-rich Low_complexity Low_complexity 1 83 0 25 0 0 0 chr17 57845953 57845978 -27592502 + GC_rich Low_complexity Low_complexity 1 25 0 396 242 152 8 chr17 57846982 57847114 -27591366 - MIR3 SINE MIR -11 197 47 207 219 0 0 chr17 57847142 57847183 -27591297 + T-rich Low_complexity Low_complexity 1 41 0 402 289 230 5 chr17 57847277 57847464 -27591016 - MIR SINE MIR -14 248 20 1510 164 52 0 chr17 57847697 57847993 -27590487 + AluJo SINE Alu 1 310 0 1425 226 126 60 chr17 57848435 57848953 -27589527 - MLT1H1 LTR MaLR 0 555 4 2114 99 0 33 chr17 57849132 57849435 -27589045 + AluSx SINE Alu 1 293 -19 199 316 35 0 chr17 57849705 57849762 -27588718 + L2 LINE L2 3251 3309 -4 186 43 0 0 chr17 57849851 57849874 -27588606 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 517 275 6 64 chr17 57850011 57850182 -27588298 + MER102b DNA MER1_type 181 341 0 333 339 101 0 chr17 57850300 57850468 -27588012 - MIR3 SINE MIR -5 203 19 363 257 114 0 chr17 57850546 57850651 -27587829 + L2 LINE L2 3156 3272 0 264 250 0 0 chr17 57850662 57850726 -27587754 - MIR SINE MIR -120 142 79 398 298 50 16 chr17 57851019 57851140 -27587340 - MIR SINE MIR -117 145 21 535 298 213 15 chr17 57851189 57851751 -27586729 + L2 LINE L2 2626 3313 0 321 218 109 18 chr17 57852296 57852406 -27586074 - MIR SINE MIR -50 212 93 543 227 93 27 chr17 57852463 57852613 -27585867 + MIR SINE MIR 21 180 -82 283 278 38 53 chr17 57853150 57853283 -27585197 - MIR3 SINE MIR -12 196 66 336 316 130 56 chr17 57853645 57854384 -27584096 + L2 LINE L2 2233 3036 -236 515 296 139 14 chr17 57854443 57854659 -27583821 - MIR SINE MIR 0 262 20 261 367 60 13 chr17 57854706 57854856 -27583624 + L2 LINE L2 3108 3264 -8 250 265 118 0 chr17 57855002 57855070 -27583410 + MIR SINE MIR 14 89 -173 409 273 30 85 chr17 57855355 57855520 -27582960 - MIR3 SINE MIR -6 202 47 2041 120 16 3 chr17 57855577 57855885 -27582595 - AluSx SINE Alu 0 312 1 210 171 0 0 chr17 57856246 57856287 -27582193 + (TG)n Simple_repeat Simple_repeat 1 41 0 2010 120 0 0 chr17 57856287 57856571 -27581909 - AluSx SINE Alu -26 286 3 662 226 146 53 chr17 57856779 57857005 -27581475 - MIR SINE MIR 0 262 16 425 326 39 0 chr17 57857006 57857135 -27581345 + MIR SINE MIR 118 251 -11 904 133 0 0 chr17 57857735 57857870 -27580610 - AluSq SINE Alu -135 178 44 189 132 0 0 chr17 57858109 57858147 -27580333 + (TTTCG)n Simple_repeat Simple_repeat 3 40 0 1678 154 4 0 chr17 57858162 57858434 -27580046 - AluSx SINE Alu -39 273 1 289 284 144 51 chr17 57858434 57858670 -27579810 - MIR SINE MIR 0 262 5 209 268 0 110 chr17 57858763 57858845 -27579635 - MIR3 SINE MIR -21 187 115 275 303 66 0 chr17 57858884 57858960 -27579520 - MIR SINE MIR -83 125 45 243 315 76 99 chr17 57859228 57859650 -27578830 - L2 LINE L2 -458 2856 2445 339 325 43 37 chr17 57859735 57859898 -27578582 + MIR3 SINE MIR 22 185 -23 541 319 116 33 chr17 57859932 57860261 -27578219 - L2 LINE L2 0 3272 2917 252 214 272 39 chr17 57860610 57860713 -27577767 - MIR SINE MIR -116 146 20 368 282 56 28 chr17 57861190 57861332 -27577148 + MIR SINE MIR 22 167 -95 924 147 6 6 chr17 57861598 57861754 -27576726 + FRAM SINE Alu 1 156 -20 571 306 43 5 chr17 57861798 57861984 -27576496 - MIR SINE MIR -59 203 11 512 339 0 12 chr17 57862001 57862166 -27576314 + MIR SINE MIR 8 170 -92 2356 71 0 7 chr17 57862272 57862581 -27575899 - AluY SINE Alu -4 307 1 238 254 60 15 chr17 57862692 57862759 -27575721 - MIR SINE MIR -89 173 104 207 0 0 0 chr17 57862782 57862805 -27575675 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 216 338 76 64 chr17 57863533 57863690 -27574790 - L2 LINE L2 -75 3197 3039 187 236 36 154 chr17 57863837 57863868 -27574612 + MIR SINE MIR 80 113 -149 1949 134 7 0 chr17 57863868 57864166 -27574314 - AluSq SINE Alu -9 304 5 187 236 36 154 chr17 57864166 57864244 -27574236 + MIR SINE MIR 113 176 -86 883 167 30 99 chr17 57864500 57864733 -27573747 - MER20 DNA MER1_type 0 219 3 218 286 16 16 chr17 57864782 57864845 -27573635 - MIR SINE MIR -61 147 85 471 314 41 13 chr17 57866405 57866631 -27571849 - MIR SINE MIR -6 256 18 269 309 197 44 chr17 57866731 57867026 -27571454 - L2 LINE L2 -16 3256 2917 805 270 68 13 chr17 57867273 57867510 -27570970 + MIR SINE MIR 2 251 -11 267 79 0 0 chr17 57868210 57868248 -27570232 + (CA)n Simple_repeat Simple_repeat 1 38 0 375 251 131 28 chr17 57868444 57868646 -27569834 + MIR SINE MIR 34 259 -3 246 266 85 11 chr17 57868809 57868903 -27569577 - MIR SINE MIR -50 212 112 1522 228 58 4 chr17 57869003 57869396 -27569084 + MLT1F LTR MaLR 12 456 -111 2194 109 0 0 chr17 57869464 57869766 -27568714 - AluSx SINE Alu -10 302 1 640 309 145 37 chr17 57869995 57870604 -27567876 + L2 LINE L2 2561 3266 -6 1985 128 3 3 chr17 57870791 57871087 -27567393 - AluSx SINE Alu -16 296 1 333 68 0 0 chr17 57871310 57871354 -27567126 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 696 205 179 5 chr17 57871387 57871582 -27566898 + MIR SINE MIR 34 262 0 357 308 145 0 chr17 57871576 57871693 -27566787 - L2 LINE L2 -1 3271 3138 * 215 227 0 0 chr17 57871980 57872024 -27566456 - L2 LINE L2 -677 2637 2594 1142 196 33 5 chr17 57872076 57872290 -27566190 - MER58A DNA MER1_type -4 220 1 496 311 99 23 chr17 57872964 57873308 -27565172 + L1MC4a LINE L1 5524 5893 -1915 942 174 17 6 chr17 57873378 57873550 -27564930 - MER96 DNA MER1_type 0 175 2 311 220 55 55 chr17 57873867 57873976 -27564504 - MLT1J LTR MaLR -42 469 361 662 267 101 16 chr17 57874001 57874311 -27564169 - MLT1I LTR MaLR -22 387 77 493 234 72 32 chr17 57874598 57874763 -27563717 - MIR SINE MIR -62 146 16 2236 85 9 29 chr17 57875077 57875393 -27563087 + AluSx SINE Alu 1 310 -2 398 316 98 35 chr17 57875401 57875626 -27562854 + MIR SINE MIR 19 256 -6 207 0 0 0 chr17 57875818 57875841 -27562639 + (A)n Simple_repeat Simple_repeat 1 23 0 2099 114 0 0 chr17 57876218 57876508 -27561972 + AluSg SINE Alu 1 290 -20 399 21 0 0 chr17 57877360 57877408 -27561072 + (TG)n Simple_repeat Simple_repeat 2 49 0 454 370 88 18 chr17 57878647 57878874 -27559606 - MIR SINE MIR 0 262 20 2168 102 0 0 chr17 57878874 57879177 -27559303 + AluSq SINE Alu 1 303 -10 298 206 27 14 chr17 57879576 57879649 -27558831 + MIR SINE MIR 77 150 -112 2147 88 0 23 chr17 57879669 57879974 -27558506 - AluSx SINE Alu -14 298 1 354 209 8 93 chr17 57880448 57880577 -27557903 - MIR SINE MIR -65 197 80 1935 129 17 0 chr17 57880663 57880965 -27557515 + AluSx SINE Alu 1 307 -5 317 240 0 83 chr17 57881590 57881686 -27556794 - L1MC4 LINE L1 -1340 6702 6615 322 340 11 14 chr17 57881767 57881934 -27556546 + GA-rich Low_complexity Low_complexity 1 166 0 1349 203 6 11 chr17 57882383 57882703 -27555777 - MLT1A1 LTR MaLR 0 365 1 331 350 122 0 chr17 57883130 57883253 -27555227 + L2 LINE L2 3121 3258 -14 1059 156 78 99 chr17 57883258 57883374 -27555106 + AluJo SINE Alu 5 122 -190 264 91 0 0 chr17 57883374 57883418 -27555062 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1059 156 78 99 chr17 57883418 57883487 -27554993 + AluJo SINE Alu 122 191 -121 2208 98 3 16 chr17 57883487 57883804 -27554676 - AluSq SINE Alu 0 313 1 1059 156 78 99 chr17 57883804 57883900 -27554580 + AluJo SINE Alu 191 281 -31 599 48 12 0 chr17 57883901 57883984 -27554496 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 246 274 87 0 chr17 57884146 57884250 -27554230 + MIR SINE MIR 74 192 -64 298 273 148 74 chr17 57884511 57884687 -27553793 - MIR SINE MIR -54 208 20 2013 125 0 3 chr17 57885916 57886264 -27552216 - AluSx SINE Alu 0 347 1 633 295 27 6 chr17 57886577 57886760 -27551720 - MIR SINE MIR -74 188 2 184 258 97 0 chr17 57887398 57887460 -27551020 - MIR SINE MIR -92 170 103 246 300 294 6 chr17 57887468 57887638 -27550842 - MIR SINE MIR -13 249 31 610 214 149 0 chr17 57887983 57888137 -27550343 - MER45A DNA AcHobo 0 178 2 250 337 0 12 chr17 57888813 57888896 -27549584 + GA-rich Low_complexity Low_complexity 3 84 0 315 300 15 69 chr17 57888902 57889032 -27549448 + L2 LINE L2 3175 3297 -16 381 243 6 0 chr17 57889086 57889250 -27549230 + (TGGA)n Simple_repeat Simple_repeat 1 165 0 368 279 29 59 chr17 57889350 57889486 -27548994 - MIR SINE MIR -80 182 51 1396 229 175 48 chr17 57890113 57890633 -27547847 + MLT1E LTR MaLR 3 588 -5 587 215 35 28 chr17 57890837 57890981 -27547499 - MLT1H LTR MaLR -400 149 5 284 233 68 19 chr17 57891074 57891177 -27547303 + L1ME4a LINE L1 6013 6120 -1 199 331 72 50 chr17 57891488 57891552 -27546928 - MIR3 SINE MIR -7 201 140 445 145 13 13 chr17 57891552 57891628 -27546852 + MER116 DNA Mariner 5 80 0 199 331 72 50 chr17 57891628 57891702 -27546778 - MIR3 SINE MIR -68 140 60 237 65 0 0 chr17 57892433 57892464 -27546016 + (TC)n Simple_repeat Simple_repeat 2 32 0 264 100 0 0 chr17 57892465 57892505 -27545975 + (CA)n Simple_repeat Simple_repeat 2 41 0 212 303 76 0 chr17 57893386 57893452 -27545028 + L3b LINE CR1 1485 1555 -28 477 215 168 0 chr17 57893470 57893577 -27544903 - L2 LINE L2 -2 3270 3146 329 288 136 24 chr17 57893711 57893836 -27544644 + L2 LINE L2 3175 3313 0 219 154 26 0 chr17 57893836 57893875 -27544605 + (TGGA)n Simple_repeat Simple_repeat 2 41 0 228 229 101 92 chr17 57894081 57894190 -27544290 - MER117 DNA MER1_type -87 110 1 1858 113 39 0 chr17 57894744 57895028 -27543452 + AluSx SINE Alu 1 295 -17 336 48 0 0 chr17 57895588 57895630 -27542850 + (TATAA)n Simple_repeat Simple_repeat 4 45 0 272 27 27 0 chr17 57896445 57896482 -27541998 + (TC)n Simple_repeat Simple_repeat 1 38 0 2178 112 0 3 chr17 57897455 57897758 -27540722 - AluSx SINE Alu -10 302 1 278 267 67 149 chr17 57898184 57898212 -27540268 - MER91A DNA MER1_type 0 196 167 306 0 0 0 chr17 57898212 57898246 -27540234 + (TTA)n Simple_repeat Simple_repeat 3 36 0 4084 58 20 0 chr17 57898246 57898749 -27539731 - L1PA6 LINE L1 -18 6136 5624 278 267 67 149 chr17 57898749 57898914 -27539566 - MER91A DNA MER1_type -27 169 18 726 297 40 9 chr17 57899092 57899314 -27539166 - MIR SINE MIR -5 257 29 372 255 27 71 chr17 57899342 57899526 -27538954 + MER5B DNA MER1_type 1 176 -2 1856 143 4 0 chr17 57899782 57900107 -27538373 - AluSx SINE Alu 0 326 1 580 192 108 8 chr17 57900474 57900604 -27537876 - MIR SINE MIR -39 223 81 423 344 20 7 chr17 57900789 57900940 -27537540 + MIR3 SINE MIR 19 171 -37 742 236 90 55 chr17 57901006 57901316 -27537164 + MLT1H LTR MaLR 2 322 -227 270 155 69 139 chr17 57901289 57901428 -27537052 + MLT1H LTR MaLR 463 549 0 * 454 283 65 14 chr17 57901604 57901742 -27536738 + L2 LINE L2 3127 3271 -1 213 311 155 0 chr17 57901965 57902068 -27536412 - L2 LINE L2 0 3272 3154 1067 242 6 30 chr17 57902500 57902819 -27535661 + L1MA1 LINE L1 5556 5824 -297 457 331 55 17 chr17 57902839 57903020 -27535460 + MIR SINE MIR 75 262 0 922 234 108 69 chr17 57904186 57904593 -27533887 - MLT1G LTR MaLR 0 590 109 183 80 0 0 chr17 57904931 57904956 -27533524 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 417 296 49 7 chr17 57906440 57906582 -27531898 - L1M4 LINE L1 -2801 3345 3198 232 290 11 32 chr17 57906619 57906712 -27531768 - MARNA DNA Mariner -362 224 134 587 259 44 59 chr17 57906957 57907307 -27531173 + MLT1J2 LTR MaLR 67 402 -7 21 0 0 0 chr17 57907727 57907748 -27530732 + AT_rich Low_complexity Low_complexity 1 21 0 646 286 116 17 chr17 57907954 57908297 -27530183 - L1MB8 LINE L1 -282 5896 5514 714 199 114 25 chr17 57908624 57908825 -27529655 + MER96B DNA MER1_type? 9 227 -190 333 62 0 0 chr17 57908879 57908927 -27529553 + (CA)n Simple_repeat Simple_repeat 2 49 0 318 199 0 5 chr17 57908947 57909019 -27529461 + MIR SINE MIR 81 151 -57 499 283 147 11 chr17 57909189 57909373 -27529107 - MIR SINE MIR -6 256 48 291 104 0 0 chr17 57910392 57910440 -27528040 + (CA)n Simple_repeat Simple_repeat 2 49 0 1065 198 24 10 chr17 57910897 57911104 -27527376 - MER20 DNA MER1_type 0 219 10 297 175 18 18 chr17 57911551 57911608 -27526872 - MIR SINE MIR -62 146 90 226 154 58 0 chr17 57912093 57912145 -27526335 + MIR SINE MIR 70 124 -84 1735 179 26 63 chr17 57912756 57913135 -27525345 - MLT1A1 LTR MaLR 0 365 1 233 355 18 27 chr17 57913307 57913417 -27525063 + MIR3 SINE MIR 4 112 -96 247 121 35 0 chr17 57913968 57914026 -27524454 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 336 102 0 0 chr17 57914283 57914332 -27524148 + (CA)n Simple_repeat Simple_repeat 2 50 0 1579 177 44 7 chr17 57915644 57915938 -27522542 - AluSx SINE Alu -7 305 1 251 158 0 0 chr17 57916274 57916312 -27522168 - MLT1B LTR MaLR -18 372 335 3677 106 18 8 chr17 57916312 57916805 -27521675 + Charlie3 DNA MER1_type 1 498 -2212 3264 89 38 13 chr17 57916801 57917250 -27521230 + Charlie3 DNA MER1_type 2242 2701 -9 * 1784 137 52 37 chr17 57917253 57917419 -27521061 - MLT1B LTR MaLR -46 344 182 1812 123 0 4 chr17 57917419 57917687 -27520793 - AluSx SINE Alu -45 267 1 1784 137 52 37 chr17 57917687 57917848 -27520632 - MLT1B LTR MaLR -208 182 12 262 173 0 39 chr17 57917909 57917961 -27520519 + L2 LINE L2 3264 3313 0 278 323 31 8 chr17 57918121 57918248 -27520232 + MIR SINE MIR 47 176 -86 1425 254 138 13 chr17 57918349 57918876 -27519604 - MLT1G1 LTR MaLR -2 593 1 906 209 0 16 chr17 57919161 57919338 -27519142 + AluJo SINE Alu 1 176 -136 914 74 0 27 chr17 57919338 57919487 -27518993 + (GAAA)n Simple_repeat Simple_repeat 2 146 0 2723 3 0 28 chr17 57919995 57920315 -27518165 - AluYa5 SINE Alu 0 311 1 223 333 0 0 chr17 57920515 57920599 -27517881 + (CA)n Simple_repeat Simple_repeat 2 85 0 225 268 0 0 chr17 57920610 57920748 -27517732 + (CA)n Simple_repeat Simple_repeat 1 138 0 419 324 132 72 chr17 57920756 57921279 -27517201 + L2 LINE L2 2723 3271 -1 1206 178 93 130 chr17 57921318 57921748 -27516732 - MSTD LTR MaLR 0 428 13 28 48 0 0 chr17 57922051 57922093 -27516387 + AT_rich Low_complexity Low_complexity 1 42 0 358 261 92 15 chr17 57922268 57922398 -27516082 - MLT1F1 LTR MaLR -317 250 111 522 235 211 29 chr17 57922595 57922799 -27515681 - MIR SINE MIR -8 254 14 637 174 12 0 chr17 57923196 57923357 -27515123 + CT-rich Low_complexity Low_complexity 1 163 0 180 0 0 0 chr17 57923359 57923379 -27515101 + (TC)n Simple_repeat Simple_repeat 1 20 0 264 276 133 10 chr17 57923561 57923659 -27514821 - MIR SINE MIR -89 119 9 409 298 41 102 chr17 57923747 57924042 -27514438 + L2 LINE L2 2992 3268 -4 646 342 58 17 chr17 57924224 57924464 -27514016 - MIR SINE MIR 0 262 13 228 389 79 8 chr17 57924539 57924665 -27513815 + L2 LINE L2 3122 3256 -16 352 279 136 7 chr17 57924923 57925063 -27513417 - MIR3 SINE MIR -46 162 5 284 346 75 0 chr17 57925661 57925768 -27512712 + L2 LINE L2 3153 3267 -5 387 377 16 0 chr17 57926321 57926443 -27512037 + MER91A DNA MER1_type 20 143 -53 208 211 0 0 chr17 57927136 57927174 -27511306 + C-rich Low_complexity Low_complexity 1 38 0 206 248 139 58 chr17 57928373 57928510 -27509970 - L3 LINE CR1 -16 1561 1414 243 179 321 0 chr17 57928617 57928673 -27509807 - L2 LINE L2 -2 3311 3238 1998 306 40 16 chr17 57928799 57929553 -27508927 - L3 LINE CR1 -185 1392 572 1272 331 28 21 chr17 57929946 57930475 -27508005 - L3 LINE CR1 -996 581 49 890 312 71 21 chr17 57930545 57930981 -27507499 - MLT1L LTR MaLR 0 615 158 1168 144 0 0 chr17 57931044 57931218 -27507262 + AluSx SINE Alu 1 174 -138 1197 179 9 0 chr17 57931245 57931469 -27507011 - AluJo SINE Alu -3 309 84 1880 146 3 19 chr17 57932953 57933269 -27505211 + AluJo SINE Alu 1 311 -1 22 0 0 0 chr17 57933893 57933915 -27504565 + AT_rich Low_complexity Low_complexity 1 22 0 1880 220 98 34 chr17 57934048 57934547 -27503933 + MLT1F LTR MaLR 3 533 -9 852 291 70 18 chr17 57934549 57935005 -27503475 + MLT1F-int LTR MaLR 1 600 -771 2237 100 7 0 chr17 57935034 57935344 -27503136 + AluSq SINE Alu 1 312 -1 320 284 101 34 chr17 57935609 57935757 -27502723 + MLT1F-int LTR MaLR 692 849 -522 462 290 123 49 chr17 57935998 57936322 -27502158 + MLT1F-int LTR MaLR 1023 1370 -1 203 202 5 96 chr17 57936401 57936599 -27501881 + (TAG)n Simple_repeat Simple_repeat 1 180 0 801 240 40 68 chr17 57936663 57936869 -27501611 + MIR SINE MIR 7 206 -56 2176 111 0 10 chr17 57936869 57937176 -27501304 + AluSx SINE Alu 1 304 -8 801 240 40 68 chr17 57937176 57937219 -27501261 + MIR SINE MIR 206 249 -13 1944 118 0 17 chr17 57937564 57938008 -27500472 + AluSx SINE Alu 1 439 0 375 242 19 99 chr17 57938011 57938172 -27500308 - MIR3 SINE MIR -41 167 20 277 284 0 0 chr17 57938593 57938667 -27499813 + MIR SINE MIR 65 138 -70 183 162 0 0 chr17 57939392 57939429 -27499051 + (CA)n Simple_repeat Simple_repeat 1 37 0 536 305 68 32 chr17 57939744 57939993 -27498487 + MLT1L LTR MaLR 1 258 -357 353 299 56 37 chr17 57939997 57940211 -27498269 + MLT1J LTR MaLR 230 447 -64 204 154 46 15 chr17 57940211 57940276 -27498204 + (TA)n Simple_repeat Simple_repeat 2 68 0 462 120 0 0 chr17 57940365 57940440 -27498040 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 260 239 0 28 chr17 57940440 57940511 -27497969 + MLT1L LTR MaLR 539 607 -8 2463 53 3 0 chr17 57940632 57940934 -27497546 - AluSp SINE Alu -10 303 1 363 23 0 0 chr17 57941174 57941218 -27497262 + (TG)n Simple_repeat Simple_repeat 1 44 0 565 246 123 39 chr17 57941289 57941492 -27496988 + MIR SINE MIR 43 262 0 1561 172 0 37 chr17 57941532 57941854 -27496626 - AluJo SINE Alu 0 313 3 2991 135 9 0 chr17 57942127 57942580 -27495900 - L1PA15 LINE L1 0 6165 5709 7534 146 5 3 chr17 57942945 57944381 -27494099 - L1MC1 LINE L1 0 6333 4894 26 0 0 0 chr17 57944859 57944885 -27493595 + AT_rich Low_complexity Low_complexity 1 26 0 650 329 63 0 chr17 57944903 57945140 -27493340 - MIR SINE MIR 0 262 11 786 22 0 0 chr17 57945159 57945251 -27493229 + (TTC)n Simple_repeat Simple_repeat 2 93 0 1696 90 5 0 chr17 57945279 57945501 -27492979 - AluSp SINE Alu -90 223 1 1454 197 58 31 chr17 57945695 57946055 -27492425 - MLT1A2 LTR MaLR -4 370 1 1811 148 0 0 chr17 57946074 57946352 -27492128 - AluJb SINE Alu -1 311 34 536 270 24 0 chr17 57946352 57946478 -27492002 - AluSg/x SINE Alu -53 257 129 1153 179 19 0 chr17 57946482 57946689 -27491791 - AluJo SINE Alu -15 297 87 532 313 18 18 chr17 57946757 57946920 -27491560 - MIR3 SINE MIR -10 198 36 573 283 127 19 chr17 57946983 57947195 -27491285 - MIR SINE MIR -25 237 3 421 238 150 69 chr17 57948142 57948330 -27490150 + MIR SINE MIR 28 224 -38 1918 115 7 17 chr17 57948398 57948693 -27489787 + AluSx SINE Alu 1 292 -20 622 333 70 4 chr17 57948708 57948936 -27489544 - MIR SINE MIR 0 262 20 2965 29 0 6 chr17 57948940 57949288 -27489192 - L1PA4 LINE L1 0 6155 5810 255 222 32 0 chr17 57950061 57950124 -27488356 + GA-rich Low_complexity Low_complexity 2 66 0 387 237 222 17 chr17 57950528 57950659 -27487821 + MIR SINE MIR 50 223 -39 510 0 43 0 chr17 57950659 57950729 -27487751 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 387 237 222 17 chr17 57950729 57950770 -27487710 + MIR SINE MIR 223 254 -8 2375 81 0 0 chr17 57950821 57951129 -27487351 - AluY SINE Alu -3 308 1 498 309 109 5 chr17 57952091 57952301 -27486179 + MIR SINE MIR 31 262 0 242 333 116 0 chr17 57952364 57952493 -27485987 + MIR SINE MIR 109 252 -10 284 302 101 19 chr17 57952644 57952803 -27485677 - MIR3 SINE MIR -7 201 30 213 279 69 94 chr17 57953932 57953999 -27484481 + L2 LINE L2 2809 2876 -396 1836 136 0 19 chr17 57953999 57954307 -27484173 - AluSx SINE Alu 0 312 11 213 279 69 94 chr17 57954307 57954326 -27484154 + L2 LINE L2 2876 2894 -378 1938 136 7 3 chr17 57954326 57954636 -27483844 - AluSq SINE Alu 0 313 3 213 279 69 94 chr17 57954636 57954781 -27483699 + L2 LINE L2 2894 3035 -237 812 251 5 15 chr17 57954872 57955067 -27483413 - MIR SINE MIR -56 206 14 491 329 57 8 chr17 57955563 57955809 -27482671 - MIR SINE MIR -3 259 2 481 283 73 49 chr17 57956807 57957012 -27481468 - L3 LINE CR1 -106 1471 1262 1215 180 87 14 chr17 57957052 57957482 -27480998 + MLT1D LTR MaLR 1 403 -6 559 265 20 7 chr17 57957558 57957705 -27480775 + L2 LINE L2 2927 3075 -238 738 276 73 17 chr17 57957736 57957968 -27480512 - MER112 DNA MER1_type -6 254 10 597 260 49 20 chr17 57957977 57958181 -27480299 + L2 LINE L2 3104 3313 0 380 187 19 28 chr17 57958244 57958351 -27480129 - MER113 DNA MER1_type? -408 113 8 306 301 37 31 chr17 57958439 57958602 -27479878 - MIR3 SINE MIR -34 174 11 385 292 9 33 chr17 57958765 57958907 -27479573 + MIR SINE MIR 16 152 -62 2000 106 0 3 chr17 57958920 57959237 -27479243 + AluSc SINE Alu 1 316 0 916 174 67 45 chr17 57959645 57959869 -27478611 + ORSL DNA AcHobo 47 275 0 186 252 26 130 chr17 57959884 57959952 -27478528 - L3 LINE CR1 -141 1436 1363 1560 192 39 0 chr17 57959952 57960238 -27478242 - AluJo SINE Alu -9 303 7 186 252 26 130 chr17 57960244 57960290 -27478190 - L3 LINE CR1 -212 1365 1334 1143 227 89 51 chr17 57960358 57960661 -27477819 + MLT1C LTR MaLR 1 328 -139 1549 161 232 9 chr17 57960661 57961010 -27477470 + MSTA LTR MaLR 2 428 0 1143 227 89 51 chr17 57961010 57961156 -27477324 + MLT1C LTR MaLR 328 467 0 350 248 69 0 chr17 57961629 57961730 -27476750 + MIR SINE MIR 107 214 -48 1777 182 0 0 chr17 57962191 57962471 -27476009 - AluJo SINE Alu -32 280 1 200 361 28 0 chr17 57962850 57962922 -27475558 - MIR SINE MIR -181 81 8 278 203 68 0 chr17 57962932 57962991 -27475489 + MIR SINE MIR 126 188 -74 2023 159 70 25 chr17 57963089 57963491 -27474989 + MSTB LTR MaLR 1 420 -6 240 294 135 53 chr17 57964071 57964241 -27474239 + MIR SINE MIR 32 215 -47 303 278 188 15 chr17 57964582 57964715 -27473765 + MIR SINE MIR 88 243 -19 215 286 48 0 chr17 57965032 57965095 -27473385 - L2 LINE L2 -87 3226 3161 2450 93 3 3 chr17 57965105 57965418 -27473062 + AluSp SINE Alu 1 313 0 186 43 0 0 chr17 57965418 57965441 -27473039 + (GA)n Simple_repeat Simple_repeat 2 24 0 648 251 141 8 chr17 57966333 57966556 -27471924 + MIR SINE MIR 8 261 -1 568 297 273 31 chr17 57966761 57967654 -27470826 - L2 LINE L2 -231 3041 1919 529 145 145 43 chr17 57967654 57967771 -27470709 + FLAM_C SINE Alu 5 133 -10 538 316 76 24 chr17 57967771 57968151 -27470329 - L2 LINE L2 -1378 1936 1537 366 336 36 27 chr17 57968223 57968250 -27470230 - MIR SINE MIR -36 226 201 2261 79 14 3 chr17 57968250 57968542 -27469938 - AluY SINE Alu -16 295 1 366 336 36 27 chr17 57968542 57968737 -27469743 - MIR SINE MIR -61 201 2 217 299 11 46 chr17 57968737 57968798 -27469682 + L2 LINE L2 3210 3267 -5 386 253 0 0 chr17 57969077 57969164 -27469316 + MLT1J1 LTR MaLR 1 87 -359 200 293 0 80 chr17 57969279 57969354 -27469126 + MIR SINE MIR 45 113 -95 1288 191 46 53 chr17 57969614 57969896 -27468584 + AluJo SINE Alu 1 280 -32 225 0 0 0 chr17 57969896 57969921 -27468559 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 762 290 33 22 chr17 57969925 57970197 -27468283 + MLT1J1 LTR MaLR 4 278 -168 652 291 39 35 chr17 57971180 57971276 -27467204 - MIR SINE MIR -3 259 165 2267 98 7 3 chr17 57971276 57971572 -27466908 - AluSx SINE Alu -9 303 7 652 291 39 35 chr17 57971572 57971729 -27466751 - MIR SINE MIR -97 165 5 316 259 35 43 chr17 57972273 57972389 -27466091 - MLT1H LTR MaLR -388 161 47 250 292 43 92 chr17 57972759 57972944 -27465536 - MIR SINE MIR -54 208 33 192 321 69 23 chr17 57973979 57974110 -27464370 - L2 LINE L2 -13 3300 3164 530 238 19 0 chr17 57974809 57974914 -27463566 - MIR SINE MIR -2 260 154 2121 165 43 86 chr17 57974921 57975480 -27463000 - MER44D DNA MER2_type -15 590 1 250 281 83 31 chr17 57975824 57975920 -27462560 + MIR SINE MIR 162 262 0 181 244 222 33 chr17 57976025 57976115 -27462365 + L2 LINE L2 3164 3270 -2 627 108 0 0 chr17 57976141 57976234 -27462246 + (TGGA)n Simple_repeat Simple_repeat 3 95 0 538 233 45 0 chr17 57978525 57978658 -27459822 + L1ME3A LINE L1 6027 6165 -5 875 154 88 0 chr17 57978822 57978958 -27459522 - FRAM SINE Alu -30 146 1 2871 90 0 3 chr17 57979422 57979787 -27458693 + THE1B LTR MaLR 1 364 0 185 332 58 46 chr17 57979912 57980153 -27458327 + L2 LINE L2 2839 3082 -190 568 273 133 40 chr17 57980223 57980501 -27457979 + L2 LINE L2 2502 2805 -509 701 295 135 22 chr17 57982167 57982611 -27455869 + L2 LINE L2 2820 3313 0 286 244 12 12 chr17 57982647 57982729 -27455751 - MLT1K LTR MaLR -2 586 505 189 272 0 74 chr17 57983045 57983126 -27455354 + L2 LINE L2 3187 3261 -11 197 314 71 0 chr17 57983467 57983537 -27454943 + L2 LINE L2 3152 3226 -46 233 363 47 12 chr17 57983686 57983857 -27454623 - L2 LINE L2 -184 3088 2912 382 348 80 28 chr17 57984148 57984398 -27454082 - L2 LINE L2 -1 3271 3009 1350 192 0 94 chr17 57984402 57984762 -27453718 - MER58B DNA MER1_type -15 326 1 1539 190 28 28 chr17 57984963 57985051 -27453429 - MER63B DNA MER1_type -688 374 287 1690 174 40 0 chr17 57985051 57985350 -27453130 + AluJo SINE Alu 1 311 -1 1539 190 28 28 chr17 57985350 57985624 -27452856 - MER63B DNA MER1_type -774 288 12 232 255 0 0 chr17 57987454 57987501 -27450979 + polypyrimidine Low_complexity Low_complexity 4 50 0 209 259 93 56 chr17 57987501 57987609 -27450871 - L3 LINE CR1 -162 1415 1304 761 281 0 0 chr17 57987615 57987786 -27450694 - MIR SINE MIR -90 172 2 209 289 222 33 chr17 57987826 57987916 -27450564 - L3b LINE CR1 -34 1549 1443 191 36 36 0 chr17 57988785 57988813 -27449667 + (TTG)n Simple_repeat Simple_repeat 2 30 0 347 282 41 87 chr17 57989351 57989546 -27448934 - MIR SINE MIR -14 248 63 983 209 71 4 chr17 57989585 57989838 -27448642 - MER33 DNA MER1_type 0 324 55 227 224 0 0 chr17 57989829 57989878 -27448602 - MER3 DNA MER1_type -121 88 40 * 284 100 0 20 chr17 57990301 57990351 -27448129 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 1583 193 98 28 chr17 57990366 57990556 -27447924 + MLT1C LTR MaLR 8 183 -284 2438 118 25 6 chr17 57990556 57990912 -27447568 - THE1B LTR MaLR -1 363 1 1583 193 98 28 chr17 57990912 57991151 -27447329 + MLT1C LTR MaLR 183 467 0 409 303 88 66 chr17 57991380 57991697 -27446783 + L3 LINE CR1 1251 1574 -3 2427 234 18 23 chr17 57992753 57992823 -27445657 - MLT1H1 LTR MaLR 0 555 486 2078 103 10 14 chr17 57992823 57993114 -27445366 + AluSx SINE Alu 2 291 -21 2427 234 18 23 chr17 57993114 57993599 -27444881 - MLT1H1 LTR MaLR -69 486 3 2401 88 3 0 chr17 57993689 57993996 -27444484 + AluSp SINE Alu 1 308 -5 2049 158 34 11 chr17 57994053 57994233 -27444247 + MLT1B LTR MaLR 1 175 -215 1065 194 88 57 chr17 57994233 57994516 -27443964 + AluJb SINE Alu 5 296 -6 2049 158 34 11 chr17 57994516 57994531 -27443949 + MLT1B LTR MaLR 175 188 -202 2189 49 0 0 chr17 57994531 57994798 -27443682 + L1PA4 LINE L1 5889 6155 0 2049 158 34 11 chr17 57994798 57994982 -27443498 + MLT1B LTR MaLR 188 390 0 288 77 0 0 chr17 57995344 57995383 -27443097 + (CA)n Simple_repeat Simple_repeat 1 39 0 326 301 163 20 chr17 57995450 57995603 -27442877 + MIR3 SINE MIR 32 206 -2 270 254 113 0 chr17 57995666 57995737 -27442743 + MIR SINE MIR 65 143 -65 373 354 76 39 chr17 57996004 57996981 -27441499 + L2 LINE L2 752 1764 -1550 315 329 46 13 chr17 57997289 57997441 -27441039 - L1ME4a LINE L1 -227 5894 5738 324 305 35 58 chr17 57997974 57998148 -27440332 + MIR3 SINE MIR 30 199 -9 972 275 122 10 chr17 57998387 57998807 -27439673 - LTR33A LTR ERVL -15 508 70 414 237 174 10 chr17 57998847 57999019 -27439461 - MIR SINE MIR -4 204 5 381 93 0 0 chr17 57999079 57999133 -27439347 + (TTTC)n Simple_repeat Simple_repeat 4 57 0 205 281 112 45 chr17 57999134 57999223 -27439257 + MIR SINE MIR 17 111 -97 195 156 0 0 chr17 57999229 57999261 -27439219 - L2 LINE L2 -10 3303 3272 204 239 0 0 chr17 57999268 57999314 -27439166 + MIR SINE MIR 109 154 -108 281 198 0 37 chr17 57999652 57999733 -27438747 + GA-rich Low_complexity Low_complexity 3 80 0 192 308 50 2 chr17 58000194 58000287 -27438193 + MIR SINE MIR 65 161 -47 780 266 180 12 chr17 58000291 58000708 -27437772 - LTR33 LTR ERVL -19 502 16 266 250 17 0 chr17 58000739 58000799 -27437681 + MIR SINE MIR 202 262 0 249 83 0 0 chr17 58000907 58000943 -27437537 + MER51A LTR ERV1 1 36 -598 * 1211 142 32 103 chr17 58000941 58001252 -27437228 + MER51A LTR ERV1 328 616 -18 201 248 80 11 chr17 58001567 58001694 -27436786 + MIR SINE MIR 8 184 -78 180 278 130 35 chr17 58001750 58001865 -27436615 - MIR3 SINE MIR -71 137 12 2424 87 0 13 chr17 58002184 58002496 -27435984 - AluSx SINE Alu -4 308 1 460 286 50 19 chr17 58002721 58002882 -27435598 + MIR SINE MIR 26 191 -71 428 243 59 59 chr17 58003742 58003894 -27434586 - MIR SINE MIR -54 208 57 293 264 118 9 chr17 58004222 58004332 -27434148 + L2 LINE L2 2790 2911 -403 331 204 310 18 chr17 58004341 58004454 -27434026 + MER5A DNA MER1_type 41 186 -3 440 344 77 37 chr17 58004472 58004525 -27433955 + L2 LINE L2 2917 2966 -306 2568 68 0 10 chr17 58004525 58004835 -27433645 - AluSc SINE Alu -2 307 1 440 344 77 37 chr17 58004835 58005054 -27433426 + L2 LINE L2 2966 3200 -72 227 304 127 18 chr17 58005546 58005766 -27432714 - HAL1 LINE L1 0 2507 2264 2856 64 3 17 chr17 58005859 58006219 -27432261 + THE1A LTR MaLR 1 355 0 12182 87 2 11 chr17 58006219 58007775 -27430705 + THE1A-int LTR MaLR 1 1545 -35 2537 74 0 0 chr17 58007775 58008074 -27430406 + AluY SINE Alu 1 299 -12 12182 87 2 11 chr17 58008074 58008110 -27430370 + THE1A-int LTR MaLR 1545 1580 0 488 65 0 0 chr17 58008110 58008172 -27430308 + THE1A LTR MaLR 1 62 -293 363 218 115 0 chr17 58008172 58008259 -27430221 + MIR SINE MIR 114 210 -52 310 289 30 106 chr17 58008587 58008812 -27429668 - MIR SINE MIR -23 239 40 1663 186 7 4 chr17 58008865 58009144 -27429336 + AluJb SINE Alu 1 280 -32 733 130 26 13 chr17 58009168 58009322 -27429158 + GA-rich Low_complexity Low_complexity 4 159 0 281 337 56 11 chr17 58009780 58009869 -27428611 + MER91A DNA MER1_type 32 124 -72 * 507 331 0 0 chr17 58009845 58009969 -27428511 - MER91A DNA MER1_type -72 124 1 676 256 17 0 chr17 58009974 58010150 -27428330 + MER102a DNA MER1_type 148 326 -4 246 225 86 86 chr17 58011174 58011361 -27427119 - MST-int LTR MaLR -1 1650 1464 2051 105 3 13 chr17 58012235 58012548 -27425932 + AluY SINE Alu 2 311 0 1794 142 30 0 chr17 58013072 58013374 -27425106 + AluJo SINE Alu 1 311 -1 406 286 40 16 chr17 58014663 58014789 -27423691 + L3b LINE CR1 1333 1461 -122 216 0 0 0 chr17 58014789 58014813 -27423667 + (T)n Simple_repeat Simple_repeat 1 24 0 207 69 0 0 chr17 58015853 58015882 -27422598 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 277 259 14 86 chr17 58015904 58016043 -27422437 - L2 LINE L2 -46 3267 3139 674 301 70 23 chr17 58016049 58016394 -27422086 - L2 LINE L2 -110 3203 2843 310 353 50 0 chr17 58016435 58016554 -27421926 - MIR3 SINE MIR -25 183 59 489 324 53 24 chr17 58016761 58016968 -27421512 + MIR SINE MIR 20 232 -30 382 325 32 87 chr17 58017090 58017590 -27420890 - L2 LINE L2 -1 3271 2730 321 243 0 14 chr17 58017627 58017701 -27420779 - L2 LINE L2 0 3272 3200 187 259 19 37 chr17 58017775 58017829 -27420651 + MIR SINE MIR 20 72 -136 848 236 23 0 chr17 58018078 58018252 -27420228 - MER45A DNA AcHobo 0 178 1 346 271 49 49 chr17 58018256 58018378 -27420102 - MIR3 SINE MIR -52 156 35 235 391 26 26 chr17 58018508 58018741 -27419739 + L2 LINE L2 2737 2969 -345 195 162 0 0 chr17 58018863 58018900 -27419580 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 840 178 10 0 chr17 58018960 58019275 -27419205 + (TCCA)n Simple_repeat Simple_repeat 1 318 0 456 239 34 34 chr17 58019277 58019394 -27419086 - L2 LINE L2 -1 3271 3155 21 43 0 0 chr17 58021297 58021320 -27417160 + AT_rich Low_complexity Low_complexity 1 23 0 311 231 82 106 chr17 58022092 58022300 -27416180 - MIR SINE MIR -1 261 59 269 226 9 104 chr17 58022306 58022412 -27416068 + MIR SINE MIR 83 178 -84 22 56 0 0 chr17 58022747 58022783 -27415697 + AT_rich Low_complexity Low_complexity 1 36 0 1004 241 9 5 chr17 58022977 58023193 -27415287 + MIR SINE MIR 8 224 -38 413 339 16 0 chr17 58023333 58023460 -27415020 + MIR3 SINE MIR 32 160 -48 518 241 46 0 chr17 58023590 58023698 -27414782 - MER81 DNA DNA -1 113 1 352 190 109 75 chr17 58023929 58024103 -27414377 + MER113 DNA MER1_type? 152 331 -190 460 261 8 8 chr17 58024130 58024249 -27414231 + MER113 DNA MER1_type? 397 515 -6 1624 160 0 11 chr17 58024366 58024647 -27413833 + AluJo SINE Alu 5 282 -30 232 136 77 13 chr17 58024653 58024808 -27413672 + (TA)n Simple_repeat Simple_repeat 1 165 0 324 0 0 0 chr17 58024808 58024844 -27413636 + (CA)n Simple_repeat Simple_repeat 2 37 0 940 292 138 52 chr17 58025313 58026331 -27412149 + L2 LINE L2 2170 3269 -3 766 242 96 23 chr17 58026995 58027214 -27411266 - MIR SINE MIR 0 262 28 508 299 25 44 chr17 58027459 58027594 -27410886 + MIR SINE MIR 12 142 -120 267 31 0 0 chr17 58027594 58027626 -27410854 + (ATG)n Simple_repeat Simple_repeat 3 34 0 508 299 25 44 chr17 58027626 58027703 -27410777 + MIR SINE MIR 142 219 -43 405 274 42 108 chr17 58027762 58027974 -27410506 - L2 LINE L2 0 3272 3075 23 0 0 0 chr17 58028799 58028822 -27409658 + AT_rich Low_complexity Low_complexity 1 23 0 212 204 37 0 chr17 58029364 58029418 -27409062 - MIR SINE MIR -72 136 81 727 212 143 48 chr17 58029447 58029678 -27408802 - MIR SINE MIR -2 260 8 186 43 0 0 chr17 58029682 58029705 -27408775 + (TG)n Simple_repeat Simple_repeat 2 24 0 227 291 203 0 chr17 58029889 58029968 -27408512 + L2 LINE L2 3158 3252 -20 307 307 109 66 chr17 58030235 58030418 -27408062 - MIR SINE MIR -53 155 1 650 276 26 35 chr17 58030441 58030669 -27407811 + L2 LINE L2 2848 3073 -240 545 263 19 25 chr17 58030807 58030967 -27407513 - MIR SINE MIR -31 231 73 4676 150 14 49 chr17 58030984 58031766 -27406714 + L1MB5 LINE L1 5294 6043 -131 1984 120 6 19 chr17 58031766 58032082 -27406398 + AluSx SINE Alu 1 312 0 4676 150 14 49 chr17 58032082 58032197 -27406283 + L1MB5 LINE L1 6043 6160 -14 343 256 13 0 chr17 58032220 58032298 -27406182 + L2 LINE L2 3182 3260 -12 5243 68 3 7 chr17 58032365 58033054 -27405426 - L1PA10 LINE L1 0 6168 5483 786 146 146 37 chr17 58033104 58033200 -27405280 - MER5A DNA MER1_type -2 187 103 1586 214 59 94 chr17 58033200 58033774 -27404706 + MER41C LTR ERV1 1 554 0 786 146 146 37 chr17 58033774 58033841 -27404639 - MER5A DNA MER1_type -86 103 6 439 327 30 28 chr17 58034126 58034423 -27404057 + L2 LINE L2 2709 3006 -307 216 163 163 0 chr17 58034651 58034694 -27403786 + L2 LINE L2 3246 3295 -18 225 216 14 68 chr17 58035067 58035141 -27403339 - L2 LINE L2 -10 3303 3234 4147 147 55 11 chr17 58035184 58035880 -27402600 - MER44D DNA MER2_type -7 598 1 600 184 40 16 chr17 58036044 58036169 -27402311 + MIR SINE MIR 127 254 -8 230 342 101 20 chr17 58036176 58036325 -27402155 - MIR SINE MIR -70 192 32 689 231 21 0 chr17 58036389 58036532 -27401948 + MER58B DNA MER1_type 196 341 0 187 261 15 31 chr17 58036550 58036615 -27401865 + L2 LINE L2 3169 3232 -81 548 261 34 30 chr17 58036897 58037165 -27401315 + L1M4 LINE L1 4290 4558 -1588 713 246 29 12 chr17 58037355 58037526 -27400954 - MIR SINE MIR -76 186 13 393 271 0 86 chr17 58038223 58038334 -27400146 + MIR SINE MIR 4 96 -117 1776 170 93 54 chr17 58038334 58038817 -27399663 + MLT1D LTR MaLR 4 505 0 393 271 0 86 chr17 58038817 58038869 -27399611 + MIR SINE MIR 96 151 -62 1816 132 87 0 chr17 58038869 58039158 -27399322 - MER47A DNA MER2_type 0 366 53 2894 123 19 2 chr17 58039252 58039673 -27398807 + MSTA LTR MaLR 1 428 0 210 171 0 0 chr17 58039994 58040029 -27398451 + (TA)n Simple_repeat Simple_repeat 1 35 0 225 196 0 22 chr17 58040146 58040159 -27398321 + GA-rich Low_complexity Low_complexity 2 14 -32 2120 112 0 3 chr17 58040159 58040454 -27398026 + AluSx SINE Alu 1 294 -18 225 196 0 22 chr17 58040454 58040486 -27397994 + GA-rich Low_complexity Low_complexity 14 46 0 850 200 3 5 chr17 58040984 58041384 -27397096 + (TGG)n Simple_repeat Simple_repeat 1 399 0 250 268 0 14 chr17 58041385 58041456 -27397024 + GA-rich Low_complexity Low_complexity 3 72 0 522 291 94 19 chr17 58041469 58041682 -27396798 - MIR SINE MIR -6 256 28 427 288 101 25 chr17 58041904 58042102 -27396378 - MIR SINE MIR -49 213 1 190 303 110 55 chr17 58042413 58042558 -27395922 + MIR SINE MIR 51 203 -59 741 230 19 12 chr17 58043856 58044017 -27394463 - MER5A DNA MER1_type 0 189 28 716 272 35 20 chr17 58044050 58044304 -27394176 + L1ME3A LINE L1 5679 5936 -234 371 204 31 10 chr17 58044385 58044483 -27393997 + L1MB8 LINE L1 2310 2409 -3737 * 1879 179 2 59 chr17 58044457 58044866 -27393614 + L1MB8 LINE L1 5552 5937 -241 557 290 7 0 chr17 58045522 58045677 -27392803 - LTR33 LTR ERVL -53 468 313 523 259 113 16 chr17 58045742 58045927 -27392553 - LTR33 LTR ERVL -305 216 14 1302 157 27 0 chr17 58046674 58046897 -27391583 - L1MC1 LINE L1 0 6333 6105 1668 177 0 19 chr17 58046907 58047223 -27391257 + AluJb SINE Alu 1 310 -2 1723 145 179 0 chr17 58047224 58047536 -27390944 - MSTB1 LTR MaLR -99 333 1 4591 127 43 6 chr17 58047536 58048253 -27390227 - L1MC1 LINE L1 -265 6068 5325 2558 46 0 0 chr17 58048420 58048725 -27389755 - AluY SINE Alu -5 306 2 407 325 95 39 chr17 58048754 58049106 -27389374 + L2 LINE L2 2718 3091 -181 845 178 37 18 chr17 58049263 58049426 -27389054 + FRAM SINE Alu 1 165 -11 284 274 14 0 chr17 58050339 58050412 -27388068 + MIR SINE MIR 100 173 -89 600 231 119 123 chr17 58050488 58050982 -27387498 + LTR33 LTR ERVL 19 510 -11 204 273 30 30 chr17 58050983 58051049 -27387431 + MIR SINE MIR 195 260 -2 183 344 0 0 chr17 58051105 58051166 -27387314 + L2 LINE L2 3210 3270 -2 1062 195 144 41 chr17 58051200 58051779 -27386701 + Charlie1a DNA MER1_type 49 741 -714 321 340 126 44 chr17 58053369 58053640 -27384840 - L2 LINE L2 -12 3260 2968 591 288 12 33 chr17 58053940 58054183 -27384297 + L1ME LINE L1 5546 5783 -338 2468 71 0 0 chr17 58054327 58054635 -27383845 - AluY SINE Alu -3 308 1 758 135 48 16 chr17 58054925 58055051 -27383429 - FRAM SINE Alu -46 130 1 816 266 333 24 chr17 58055052 58055677 -27382803 - L2 LINE L2 -529 2785 1968 263 329 184 0 chr17 58055753 58055905 -27382575 - MER5A DNA MER1_type 0 189 10 695 120 0 0 chr17 58056153 58056305 -27382175 + AluJb SINE Alu 185 336 0 370 183 30 0 chr17 58057845 58058009 -27380471 + (CA)n Simple_repeat Simple_repeat 2 170 0 347 229 33 6 chr17 58058027 58058364 -27380116 + (CA)n Simple_repeat Simple_repeat 1 346 0 299 251 35 12 chr17 58058501 58058672 -27379808 + (CA)n Simple_repeat Simple_repeat 1 175 0 303 185 32 6 chr17 58058698 58058855 -27379625 + (CA)n Simple_repeat Simple_repeat 2 162 0 481 242 19 76 chr17 58059536 58059693 -27378787 - MIR3 SINE MIR -7 201 54 244 259 65 9 chr17 58059708 58059816 -27378664 + L2 LINE L2 2946 3059 -213 643 214 107 0 chr17 58060282 58060441 -27378039 + MER5B DNA MER1_type 1 176 -2 920 182 47 37 chr17 58060596 58060810 -27377670 - MER20 DNA MER1_type -3 216 1 296 234 80 7 chr17 58061696 58061833 -27376647 + L2 LINE L2 2029 2175 -1139 601 234 61 89 chr17 58062090 58062154 -27376326 - MIR SINE MIR -3 259 195 38 22 0 0 chr17 58062154 58062199 -27376281 + AT_rich Low_complexity Low_complexity 1 45 0 601 234 61 89 chr17 58062199 58062360 -27376120 - MIR SINE MIR -67 195 1 32 0 0 0 chr17 58064020 58064052 -27374428 + AT_rich Low_complexity Low_complexity 1 32 0 550 298 21 0 chr17 58064673 58064814 -27373666 + MIR SINE MIR 29 172 -90 291 261 120 49 chr17 58064864 58065006 -27373474 - MIR3 SINE MIR -46 162 11 336 64 0 0 chr17 58065183 58065230 -27373250 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 1617 138 40 40 chr17 58065238 58065514 -27372966 - AluJo SINE Alu -36 276 1 1608 191 10 17 chr17 58065823 58066117 -27372363 - AluJb SINE Alu -20 292 1 1725 171 24 3 chr17 58066215 58066502 -27371978 - AluJb SINE Alu -19 293 1 201 74 0 0 chr17 58066515 58066542 -27371938 + (A)n Simple_repeat Simple_repeat 1 27 0 840 258 0 0 chr17 58066734 58066893 -27371587 + FRAM SINE Alu 1 156 -20 1150 133 153 65 chr17 58066926 58067220 -27371260 - MER33 DNA MER1_type 0 324 5 798 304 125 11 chr17 58067236 58067822 -27370658 + L2 LINE L2 2560 3207 -106 23 0 0 0 chr17 58067832 58067855 -27370625 + AT_rich Low_complexity Low_complexity 1 23 0 3898 131 23 20 chr17 58068424 58069027 -27369453 - MER6A DNA MER2_type 0 605 1 198 0 0 0 chr17 58069126 58069148 -27369332 + (T)n Simple_repeat Simple_repeat 1 22 0 1611 153 35 0 chr17 58069269 58069440 -27369040 - AluJo SINE Alu -13 299 115 207 0 0 0 chr17 58069440 58069463 -27369017 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1611 153 35 0 chr17 58069463 58069545 -27368935 - AluJo SINE Alu -197 115 37 442 302 65 0 chr17 58069852 58069991 -27368489 + L2 LINE L2 2560 2707 -607 307 243 236 28 chr17 58070084 58070228 -27368252 + MLT1H LTR MaLR 1 174 -375 377 169 88 89 chr17 58070453 58070576 -27367904 + MLT1H LTR MaLR 308 549 0 390 306 81 81 chr17 58070691 58070952 -27367528 + MIR SINE MIR 2 262 0 812 216 55 55 chr17 58071699 58072046 -27366434 + HAL1 LINE L1 839 1185 -1322 1933 101 0 8 chr17 58072068 58072336 -27366144 + L1MC1 LINE L1 5644 5909 -424 1699 239 44 14 chr17 58072379 58072809 -27365671 + MSTB2 LTR MaLR 15 457 0 370 265 125 15 chr17 58073431 58073567 -27364913 - MER5A DNA MER1_type -28 161 11 296 285 187 49 chr17 58073577 58073700 -27364780 + MIR SINE MIR 13 152 -110 414 253 168 23 chr17 58073960 58074264 -27364216 + L1ME4a LINE L1 5709 6056 -65 198 143 0 0 chr17 58074298 58074333 -27364147 + (TG)n Simple_repeat Simple_repeat 2 36 0 2092 115 4 0 chr17 58074333 58074612 -27363868 - AluSx SINE Alu -32 280 1 380 203 246 8 chr17 58074926 58075044 -27363436 + MER5A DNA MER1_type 9 154 -35 461 206 82 0 chr17 58075140 58075237 -27363243 + MIR SINE MIR 58 162 -100 183 107 0 36 chr17 58075354 58075382 -27363098 + MIR SINE MIR 217 243 -19 297 220 253 0 chr17 58075770 58075861 -27362619 + MER5A DNA MER1_type 41 154 -35 182 360 0 0 chr17 58076227 58076277 -27362203 + MER5A DNA MER1_type 9 58 -131 1082 96 0 0 chr17 58076284 58076420 -27362060 + AluSg SINE Alu 1 136 -174 368 74 0 0 chr17 58076429 58076483 -27361997 + AluSc SINE Alu 242 295 -4 2267 95 3 3 chr17 58076483 58076777 -27361703 + AluSp SINE Alu 1 294 -19 218 326 54 11 chr17 58076777 58076869 -27361611 + MER5A DNA MER1_type 66 161 -28 267 275 110 55 chr17 58076901 58077083 -27361397 - L1ME3A LINE L1 -14 6156 5965 2080 126 13 0 chr17 58077357 58077659 -27360821 + AluSq SINE Alu 1 306 -7 2525 68 0 7 chr17 58078421 58078730 -27359750 + AluY SINE Alu 1 307 -4 310 301 198 23 chr17 58079189 58079870 -27358610 - L2 LINE L2 -240 3073 2256 514 138 0 0 chr17 58080150 58080230 -27358250 + MER67A LTR ERV1 1 80 -463 2138 241 46 37 chr17 58080230 58080302 -27358178 + MER67B LTR ERV1 1 71 -590 2195 102 3 7 chr17 58080302 58080605 -27357875 - AluSg1 SINE Alu -7 302 1 2138 241 46 37 chr17 58080605 58081187 -27357293 + MER67B LTR ERV1 71 661 0 253 208 28 0 chr17 58081199 58081271 -27357209 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 22 0 0 0 chr17 58082053 58082075 -27356405 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr17 58082136 58082165 -27356315 + GC_rich Low_complexity Low_complexity 1 29 0 254 257 0 79 chr17 58082277 58082429 -27356051 + C-rich Low_complexity Low_complexity 4 143 0 188 269 77 0 chr17 58084328 58084380 -27354100 - MIR3 SINE MIR -37 171 116 24 0 0 0 chr17 58084558 58084582 -27353898 + AT_rich Low_complexity Low_complexity 1 24 0 414 290 82 69 chr17 58084966 58085371 -27353109 + L2 LINE L2 2683 3104 -168 511 165 0 0 chr17 58085399 58085478 -27353002 + MER5A DNA MER1_type 1 79 -110 281 174 221 12 chr17 58085509 58085595 -27352885 - MER53 DNA DNA -85 104 1 439 182 121 0 chr17 58085597 58085696 -27352784 + MER5A DNA MER1_type 79 189 0 880 205 107 15 chr17 58086711 58086916 -27351564 - MER58A DNA MER1_type 0 224 1 264 227 0 0 chr17 58087063 58087107 -27351373 + U6 snRNA snRNA 63 106 -1 488 172 172 0 chr17 58087110 58087239 -27351241 + L1ME2 LINE L1 6015 6166 0 26 30 0 0 chr17 58087413 58087446 -27351034 + AT_rich Low_complexity Low_complexity 1 33 0 581 219 101 41 chr17 58087456 58087675 -27350805 + L1MC4 LINE L1 7811 8042 0 1784 182 0 13 chr17 58087874 58088181 -27350299 - AluJb SINE Alu -9 303 1 2189 66 62 0 chr17 58088259 58088531 -27349949 + AluSp SINE Alu 1 289 -24 1804 136 14 14 chr17 58088721 58089038 -27349442 - AluSx SINE Alu 0 317 1 692 125 48 0 chr17 58089223 58089327 -27349153 + FLAM_A SINE Alu 18 126 -16 2154 105 10 10 chr17 58089332 58089627 -27348853 + AluSg SINE Alu 1 295 -15 764 161 161 14 chr17 58090165 58090337 -27348143 - AluSg/x SINE Alu 0 311 119 30 59 0 0 chr17 58090591 58090642 -27347838 + AT_rich Low_complexity Low_complexity 1 51 0 912 161 274 0 chr17 58091527 58091854 -27346626 - Charlie1b DNA MER1_type -68 455 37 1944 147 3 7 chr17 58091875 58092175 -27346305 + AluSx SINE Alu 1 299 -13 409 279 22 50 chr17 58092794 58092973 -27345507 - MER5B DNA MER1_type -1 177 4 739 279 64 9 chr17 58093687 58093920 -27344560 + L3 LINE CR1 1329 1574 -3 2764 221 52 8 chr17 58094303 58094933 -27343547 + L1MB7 LINE L1 5508 6165 -19 350 285 78 33 chr17 58095341 58095583 -27342897 - L1ME LINE L1 -326 5795 5543 2184 132 3 0 chr17 58095699 58095994 -27342486 - AluSx SINE Alu -16 296 1 388 320 70 19 chr17 58096005 58096161 -27342319 + MIR SINE MIR 71 234 -28 1848 170 0 0 chr17 58096501 58096818 -27341662 - AluJb SINE Alu 0 317 1 189 398 128 4 chr17 58098017 58098291 -27340189 - L2 LINE L2 -778 2536 2229 1868 164 3 25 chr17 58098475 58098793 -27339687 - AluJo SINE Alu -1 311 1 232 248 48 67 chr17 58099587 58099692 -27338788 + HAL1 LINE L1 362 464 -2043 739 256 139 74 chr17 58099745 58100248 -27338232 + HAL1 LINE L1 574 1109 -1398 1028 147 0 71 chr17 58100256 58100453 -27338027 + AluJo SINE Alu 119 301 -11 470 230 113 75 chr17 58100455 58100491 -27337989 + HAL1 LINE L1 2277 2310 -197 2352 88 0 0 chr17 58100491 58100786 -27337694 + AluSx SINE Alu 1 295 -17 470 230 113 75 chr17 58100786 58100962 -27337518 + HAL1 LINE L1 2310 2497 -10 3181 141 27 24 chr17 58101089 58101198 -27337282 - L1M2 LINE L1 -745 5401 5294 1493 166 4 0 chr17 58101198 58101433 -27337047 - MER46A DNA MER2_type 0 236 1 3181 141 27 24 chr17 58101433 58102015 -27336465 - L1M2 LINE L1 -852 5294 4799 3601 147 36 57 chr17 58102020 58102669 -27335811 + L1MA7 LINE L1 5489 6123 -168 1585 180 39 20 chr17 58102669 58102975 -27335505 - AluJb SINE Alu 0 312 1 3601 147 36 57 chr17 58102975 58103040 -27335440 + L1MA7 LINE L1 6123 6188 -103 308 242 172 10 chr17 58103333 58103432 -27335048 - L2 LINE L2 -4 3309 3195 193 374 104 47 chr17 58103796 58104084 -27334396 - L2 LINE L2 -1900 1414 1095 2400 60 0 7 chr17 58104084 58104382 -27334098 + AluSg SINE Alu 1 296 -14 193 374 104 47 chr17 58104382 58104497 -27333983 - L2 LINE L2 -2219 1095 988 2166 114 7 3 chr17 58105176 58105474 -27333006 + AluSq SINE Alu 1 299 -14 2454 91 0 0 chr17 58106153 58106462 -27332018 + AluSc SINE Alu 1 309 0 449 311 59 38 chr17 58107124 58107362 -27331118 - MIR SINE MIR -8 254 12 1400 89 0 0 chr17 58107523 58107713 -27330767 + AluY SINE Alu 120 309 -2 2297 86 3 0 chr17 58107787 58108078 -27330402 - AluY SINE Alu -19 292 1 46 45 0 0 chr17 58108452 58108519 -27329961 + AT_rich Low_complexity Low_complexity 1 67 0 1625 191 31 0 chr17 58108618 58108906 -27329574 + AluJo SINE Alu 3 299 -13 517 299 165 38 chr17 58109021 58109641 -27328839 - L2 LINE L2 -214 3058 2364 377 311 108 21 chr17 58109789 58110030 -27328450 - L2 LINE L2 -1238 2076 1815 27 0 0 0 chr17 58112160 58112187 -27326293 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr17 58113196 58113219 -27325261 + AT_rich Low_complexity Low_complexity 1 23 0 31 26 0 0 chr17 58113973 58114011 -27324469 + AT_rich Low_complexity Low_complexity 1 38 0 31 76 0 0 chr17 58114140 58114206 -27324274 + AT_rich Low_complexity Low_complexity 1 66 0 22 35 0 0 chr17 58114351 58114380 -27324100 + AT_rich Low_complexity Low_complexity 1 29 0 543 307 5 47 chr17 58114569 58114761 -27323719 + MER5A DNA MER1_type 6 189 0 1992 136 3 10 chr17 58115679 58115974 -27322506 + AluSx SINE Alu 1 293 -19 2291 75 0 53 chr17 58115974 58116295 -27322185 + AluY SINE Alu 1 304 -7 200 266 220 28 chr17 58117366 58117475 -27321005 + MIR SINE MIR 45 174 -88 297 153 122 41 chr17 58117551 58117649 -27320831 - Charlie8 DNA MER1_type -2235 182 77 22 35 0 0 chr17 58117889 58117918 -27320562 + AT_rich Low_complexity Low_complexity 1 29 0 642 310 89 13 chr17 58118418 58118731 -27319749 - MER93a LTR ERV1 -3 399 63 305 189 105 32 chr17 58118809 58118904 -27319576 - MER57-int LTR ERV1 -376 7161 7060 573 205 34 0 chr17 58119083 58119200 -27319280 + AluJo SINE Alu 12 132 -180 1823 172 0 3 chr17 58119223 58119519 -27318961 + AluJb SINE Alu 1 295 -17 809 103 0 0 chr17 58119530 58119637 -27318843 + U6 snRNA snRNA 1 107 0 691 87 0 61 chr17 58119640 58119755 -27318725 + MER4A LTR ERV1 524 631 -33 918 187 18 12 chr17 58119756 58119927 -27318553 + AluJo SINE Alu 120 291 -21 2338 104 0 10 chr17 58120622 58120929 -27317551 + AluSq SINE Alu 1 304 -9 279 275 0 0 chr17 58120951 58121020 -27317460 + MLT1A2 LTR MaLR 79 147 -227 216 319 159 22 chr17 58121270 58121408 -27317072 - MIR SINE MIR -76 186 30 2399 81 0 7 chr17 58121917 58122213 -27316267 + AluSq SINE Alu 1 294 -19 211 277 15 15 chr17 58122728 58122793 -27315687 - MIR3 SINE MIR -32 176 112 359 262 99 32 chr17 58123418 58123639 -27314841 - L1MC5 LINE L1 -26 7935 7700 343 328 155 6 chr17 58124461 58124635 -27313845 + MIR SINE MIR 4 203 -59 203 179 0 0 chr17 58124637 58124676 -27313804 + A-rich Low_complexity Low_complexity 1 39 0 1844 159 7 30 chr17 58125965 58126266 -27312214 + AluJo SINE Alu 7 300 -12 208 139 0 0 chr17 58127711 58127747 -27310733 + (TTTTTA)n Simple_repeat Simple_repeat 2 37 0 267 222 135 79 chr17 58128986 58129112 -27309368 - MIR3 SINE MIR -72 136 4 2280 113 3 3 chr17 58129399 58129709 -27308771 - AluSg SINE Alu 0 310 1 2188 125 3 10 chr17 58129989 58130300 -27308180 - AluSx SINE Alu -3 309 1 205 152 0 0 chr17 58130687 58130720 -27307760 + G-rich Low_complexity Low_complexity 2 34 0 918 137 0 34 chr17 58130940 58131086 -27307394 - AluSg SINE Alu -18 294 154 757 83 0 0 chr17 58131087 58131183 -27307297 - AluSg SINE Alu -213 97 2 2192 118 7 0 chr17 58131823 58132120 -27306360 + AluSx SINE Alu 1 299 -13 391 236 64 57 chr17 58133150 58133374 -27305106 + L1MC4 LINE L1 1992 6985 -1337 2006 124 9 63 chr17 58133396 58133727 -27304753 - AluSq SINE Alu 0 313 1 2034 122 41 7 chr17 58134179 58134473 -27304007 + AluSq SINE Alu 1 304 -9 520 191 27 18 chr17 58134493 58134603 -27303877 - FLAM_A SINE Alu -12 130 20 2409 83 0 7 chr17 58135182 58135484 -27302996 + AluSc SINE Alu 1 300 -9 233 184 0 20 chr17 58135518 58135567 -27302913 + MLT1G1 LTR MaLR 4 51 -544 327 228 290 25 chr17 58135707 58135869 -27302611 - MIR SINE MIR -1 261 57 381 282 80 58 chr17 58137217 58137381 -27301099 + HAL1b LINE L1 1157 1327 -21 2310 130 13 21 chr17 58137381 58137759 -27300721 - THE1C LTR MaLR 0 375 1 381 282 80 58 chr17 58137759 58137782 -27300698 + HAL1b LINE L1 1327 1348 0 230 333 46 9 chr17 58137834 58137942 -27300538 - L3 LINE CR1 -106 1471 1360 2168 116 23 0 chr17 58137974 58138275 -27300205 + AluSx SINE Alu 1 308 -4 205 182 0 0 chr17 58139250 58139283 -27299197 + (CA)n Simple_repeat Simple_repeat 1 33 0 883 281 81 68 chr17 58139643 58140320 -27298160 - MER21B LTR ERV1 -154 709 24 274 233 42 106 chr17 58140439 58140628 -27297852 - L1MC5 LINE L1 -30 7931 7755 186 271 82 71 chr17 58141322 58141407 -27297073 + MIR3 SINE MIR 119 204 -4 741 216 3 3 chr17 58144291 58144641 -27293839 + (TCCA)n Simple_repeat Simple_repeat 1 350 0 488 338 60 49 chr17 58144668 58145115 -27293365 - L2 LINE L2 0 3272 2821 195 325 38 12 chr17 58145163 58145243 -27293237 + MIR SINE MIR 72 153 -55 292 350 129 0 chr17 58145682 58145876 -27292604 - L2 LINE L2 -1257 2057 1839 296 246 218 7 chr17 58145894 58146036 -27292444 + MER5B DNA MER1_type 5 176 -2 188 295 95 32 chr17 58146082 58146177 -27292303 - MER5A DNA MER1_type -28 161 61 2430 97 0 3 chr17 58146181 58146489 -27291991 - AluSx SINE Alu -5 307 1 749 213 36 62 chr17 58148027 58148252 -27290228 + L1ME2 LINE L1 5937 6155 -9 1738 153 3 57 chr17 58148309 58148623 -27289857 + AluJb SINE Alu 1 297 -15 759 181 5 98 chr17 58148687 58148762 -27289718 + MER5A DNA MER1_type 2 82 -107 1813 168 0 27 chr17 58148762 58149060 -27289420 + AluJo SINE Alu 1 290 -22 759 181 5 98 chr17 58149060 58149177 -27289303 + MER5A DNA MER1_type 82 176 -13 453 216 111 33 chr17 58150431 58150612 -27287868 + MER106A DNA MER1_type 3 197 -39 197 278 139 26 chr17 58151360 58151475 -27287005 + MIR SINE MIR 77 204 -58 627 287 134 67 chr17 58151677 58151737 -27286743 - L2 LINE L2 -33 3239 3184 1651 169 26 55 chr17 58151737 58151871 -27286609 + AluJo SINE Alu 1 137 -175 2254 119 0 0 chr17 58151871 58152166 -27286314 + AluSx SINE Alu 1 295 -17 1651 169 26 55 chr17 58152166 58152339 -27286141 + AluJo SINE Alu 137 299 -13 627 287 134 67 chr17 58152339 58153017 -27285463 - L2 LINE L2 -88 3184 2445 346 268 204 14 chr17 58153698 58153840 -27284640 - MIR3 SINE MIR -24 184 16 203 241 111 19 chr17 58154245 58154299 -27284181 - L2 LINE L2 -6 3307 3249 2259 154 44 49 chr17 58154681 58155058 -27283422 + MSTB LTR MaLR 1 377 -49 2294 107 10 0 chr17 58155058 58155366 -27283114 + AluSq SINE Alu 1 311 -2 2259 154 44 49 chr17 58155366 58155416 -27283064 + MSTB LTR MaLR 377 426 0 2579 195 100 12 chr17 58155466 58156066 -27282414 + MLT1E1 LTR MaLR 2 654 0 722 289 111 34 chr17 58156476 58157023 -27281457 + L1ME3 LINE L1 5479 5947 -215 1673 93 0 5 chr17 58157092 58157335 -27281145 + AluSc SINE Alu 70 311 0 1133 209 83 10 chr17 58157385 58157615 -27280865 + MER33 DNA MER1_type 2 261 -2324 1409 180 51 63 chr17 58157615 58157931 -27280549 + AluJo SINE Alu 1 312 0 1133 209 83 10 chr17 58157931 58158001 -27280479 + MER33 DNA MER1_type 261 324 0 881 178 101 13 chr17 58158048 58158349 -27280131 + MSTD LTR MaLR 1 396 0 2386 86 0 3 chr17 58158438 58158730 -27279750 - AluSc SINE Alu -18 291 1 2324 114 0 0 chr17 58158732 58159030 -27279450 - AluSx SINE Alu -14 298 1 400 207 0 0 chr17 58159090 58159172 -27279308 + L1M4 LINE L1 5185 5266 -880 2123 230 26 5 chr17 58159172 58159856 -27278624 + MER83B-int LTR ERV1 1000 3734 -1146 983 96 48 75 chr17 58159856 58159907 -27278573 + L1MC/D LINE L1 5234 5285 -913 1126 139 0 6 chr17 58159907 58160072 -27278408 + FRAM SINE Alu 1 164 -2 983 96 48 75 chr17 58160072 58160248 -27278232 + L1MC/D LINE L1 5285 5455 -743 612 59 20 50 chr17 58160248 58160349 -27278131 + MER4A LTR ERV1 1 98 -566 1545 166 6 50 chr17 58160349 58160658 -27277822 + MER4A LTR ERV1 263 614 -50 2765 36 0 0 chr17 58160658 58160967 -27277513 - AluY SINE Alu -2 309 1 1545 166 6 50 chr17 58160967 58161016 -27277464 + MER4A LTR ERV1 614 664 0 2847 72 72 12 chr17 58161019 58161435 -27277045 + MER4A-int LTR ERV1 1 441 -6157 256 109 109 78 chr17 58161454 58161518 -27276962 + MER4A-int LTR ERV1 687 752 -5846 268 114 0 45 chr17 58161518 58161562 -27276918 + LTR49 LTR ERV1 271 312 -283 5828 131 65 13 chr17 58161583 58162690 -27275790 + MER4A-int LTR ERV1 993 2157 -4441 1812 168 24 3 chr17 58162847 58163145 -27275335 - AluJb SINE Alu -8 304 1 198 0 0 0 chr17 58163184 58163206 -27275274 + (TG)n Simple_repeat Simple_repeat 2 23 0 1985 140 3 3 chr17 58163206 58163491 -27274989 - AluSx SINE Alu -27 285 1 504 309 0 0 chr17 58163601 58163727 -27274753 - L2 LINE L2 0 3313 3188 946 269 150 6 chr17 58163812 58164172 -27274308 + L2 LINE L2 2898 3309 -4 301 160 11 53 chr17 58164451 58164639 -27273841 + (TA)n Simple_repeat Simple_repeat 1 180 0 890 115 23 0 chr17 58164703 58164877 -27273603 + (TA)n Simple_repeat Simple_repeat 1 178 0 1851 129 9 55 chr17 58164919 58165245 -27273235 - AluSq SINE Alu -2 311 1 1888 122 41 7 chr17 58165697 58165991 -27272489 + AluSq SINE Alu 1 304 -9 506 191 27 18 chr17 58166011 58166121 -27272359 - FLAM_A SINE Alu -12 130 20 2226 82 0 10 chr17 58166705 58167008 -27271472 + AluSc SINE Alu 1 300 -9 249 184 0 20 chr17 58167042 58167091 -27271389 + MLT1G1 LTR MaLR 4 51 -544 297 228 290 25 chr17 58167232 58167394 -27271086 - MIR SINE MIR -1 261 57 231 222 111 71 chr17 58168837 58168912 -27269568 + HAL1b LINE L1 1246 1327 -21 2254 132 13 24 chr17 58168912 58169291 -27269189 - THE1C LTR MaLR 0 375 1 231 222 111 71 chr17 58169291 58169314 -27269166 + HAL1b LINE L1 1327 1348 0 231 333 46 9 chr17 58169366 58169474 -27269006 - L3 LINE CR1 -106 1471 1360 1879 112 20 14 chr17 58169506 58169800 -27268680 + AluSx SINE Alu 1 296 -16 205 182 0 0 chr17 58170806 58170839 -27267641 + (CA)n Simple_repeat Simple_repeat 1 33 0 1037 255 94 84 chr17 58171199 58171878 -27266602 - MER21B LTR ERV1 -154 709 24 299 233 42 106 chr17 58171998 58172187 -27266293 - L1MC5 LINE L1 -30 7931 7755 184 271 82 71 chr17 58172882 58172967 -27265513 + MIR3 SINE MIR 119 204 -4 729 217 0 0 chr17 58175875 58176055 -27262425 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 506 210 12 12 chr17 58176067 58176229 -27262251 + (TCCA)n Simple_repeat Simple_repeat 3 164 0 461 338 60 49 chr17 58176249 58176696 -27261784 - L2 LINE L2 0 3272 2821 187 325 38 12 chr17 58176745 58176825 -27261655 + MIR SINE MIR 72 153 -55 254 349 128 5 chr17 58177269 58177464 -27261016 - L2 LINE L2 -1257 2057 1839 282 246 218 7 chr17 58177482 58177624 -27260856 + MER5B DNA MER1_type 5 176 -2 2275 100 0 3 chr17 58177771 58178080 -27260400 - AluSx SINE Alu -4 308 1 804 213 36 62 chr17 58179627 58179852 -27258628 + L1ME2 LINE L1 5937 6155 -9 1581 156 3 57 chr17 58179909 58180223 -27258257 + AluJb SINE Alu 1 297 -15 750 181 5 98 chr17 58180287 58180362 -27258118 + MER5A DNA MER1_type 2 82 -107 1640 167 0 30 chr17 58180362 58180661 -27257819 + AluJo SINE Alu 1 290 -22 750 181 5 98 chr17 58180661 58180778 -27257702 + MER5A DNA MER1_type 82 176 -13 493 221 126 32 chr17 58182041 58182231 -27256249 + MER106A DNA MER1_type 3 210 -26 191 278 139 26 chr17 58182977 58183092 -27255388 + MIR SINE MIR 77 204 -58 303 167 0 33 chr17 58183294 58183354 -27255126 - L2 LINE L2 -33 3280 3223 1449 164 14 65 chr17 58183354 58183489 -27254991 + AluJo SINE Alu 1 115 -197 2041 118 0 7 chr17 58183489 58183786 -27254694 + AluSx SINE Alu 1 295 -17 1449 164 14 65 chr17 58183786 58183943 -27254537 + AluJo SINE Alu 115 278 -34 402 319 135 34 chr17 58183949 58184641 -27253839 - L2 LINE L2 -76 3196 2445 308 266 203 21 chr17 58185325 58185468 -27253012 - MIR3 SINE MIR -24 184 16 201 241 111 19 chr17 58185875 58185929 -27252551 - L2 LINE L2 -6 3307 3249 2122 154 50 26 chr17 58186311 58186688 -27251792 + MSTB LTR MaLR 1 386 -40 2039 128 3 3 chr17 58186688 58186994 -27251486 + AluSq SINE Alu 1 306 -7 201 266 220 28 chr17 58188074 58188183 -27250297 + MIR SINE MIR 45 174 -88 325 153 122 41 chr17 58188259 58188357 -27250123 - Charlie8 DNA MER1_type -2224 193 88 22 35 0 0 chr17 58188598 58188627 -27249853 + AT_rich Low_complexity Low_complexity 1 29 0 688 309 89 16 chr17 58189128 58189442 -27249038 - MER93a LTR ERV1 -3 399 63 327 189 105 32 chr17 58189520 58189615 -27248865 - MER57-int LTR ERV1 -376 7161 7060 561 205 34 0 chr17 58189794 58189911 -27248569 + AluJo SINE Alu 12 132 -180 1559 163 0 20 chr17 58189934 58190229 -27248251 + AluJb SINE Alu 1 289 -23 806 103 0 0 chr17 58190247 58190354 -27248126 + U6 snRNA snRNA 1 107 0 738 87 0 61 chr17 58190357 58190472 -27248008 + MER4A LTR ERV1 524 631 -33 875 186 17 17 chr17 58190473 58190645 -27247835 + AluJo SINE Alu 120 291 -21 2184 104 0 10 chr17 58191342 58191649 -27246831 + AluSq SINE Alu 1 304 -9 282 275 0 0 chr17 58191671 58191740 -27246740 + MLT1A2 LTR MaLR 79 147 -227 211 319 159 22 chr17 58191991 58192129 -27246351 - MIR SINE MIR -76 186 30 2256 81 0 7 chr17 58192645 58192941 -27245539 + AluSq SINE Alu 1 294 -19 1834 145 0 19 chr17 58193459 58193769 -27244711 - AluJb SINE Alu -8 304 1 432 246 16 35 chr17 58194034 58194179 -27244301 + MLT1A2 LTR MaLR 1 147 -227 24 0 0 0 chr17 58194406 58194430 -27244050 + AT_rich Low_complexity Low_complexity 1 24 0 2240 119 0 0 chr17 58195132 58195444 -27243036 + AluSq SINE Alu 1 312 -1 1935 220 160 8 chr17 58195761 58196229 -27242251 - REP3 LTR ERV -23 539 1 554 238 85 22 chr17 58196504 58196838 -27241642 + MLT1L LTR MaLR 153 538 -77 700 184 24 54 chr17 58196840 58197034 -27241446 - FRAM SINE Alu 0 176 1 262 154 0 58 chr17 58197034 58197086 -27241394 + MLT1L LTR MaLR 566 614 -1 1156 61 0 12 chr17 58197158 58197322 -27241158 + (GAA)n Simple_repeat Simple_repeat 1 162 0 2288 82 0 0 chr17 58197622 58197925 -27240555 - AluSx SINE Alu -8 304 2 773 199 7 55 chr17 58197959 58198105 -27240375 + MER5A DNA MER1_type 1 139 -50 228 239 15 15 chr17 58198225 58198292 -27240188 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 314 258 48 65 chr17 58198772 58198896 -27239584 + MIR3 SINE MIR 35 156 -52 805 247 23 0 chr17 58198900 58199074 -27239406 + MER45A DNA AcHobo 1 178 0 301 281 33 41 chr17 58199197 58199318 -27239162 - MIR3 SINE MIR -52 156 37 212 214 67 19 chr17 58199430 58199506 -27238974 - L2 LINE L2 -300 2974 2891 2371 77 0 0 chr17 58199506 58199817 -27238663 + AluY SINE Alu 1 311 0 212 214 67 19 chr17 58199817 58199828 -27238652 - L2 LINE L2 -383 2891 2882 2162 112 0 0 chr17 58199833 58200129 -27238351 + AluSg SINE Alu 1 296 -14 1858 132 0 21 chr17 58201222 58201534 -27236946 - AluJb SINE Alu 0 306 1 1929 119 6 35 chr17 58202133 58202445 -27236035 + AluSx SINE Alu 1 303 -9 311 301 20 44 chr17 58202715 58202918 -27235562 + L1ME4a LINE L1 5692 5889 -232 205 280 129 11 chr17 58203650 58203743 -27234737 - MIR SINE MIR -66 142 39 1924 129 0 29 chr17 58204509 58204818 -27233662 - AluSg SINE Alu -10 300 1 2242 70 3 0 chr17 58205538 58205823 -27232657 - AluSp SINE Alu -6 307 22 1772 170 0 0 chr17 58205938 58206232 -27232248 + AluJo SINE Alu 3 296 -16 29 70 0 0 chr17 58206401 58206458 -27232022 + AT_rich Low_complexity Low_complexity 1 57 0 640 217 8 0 chr17 58207064 58207193 -27231287 + FLAM_A SINE Alu 1 130 -3 262 235 176 10 chr17 58207467 58207569 -27230911 - MIR SINE MIR -112 150 32 186 43 0 0 chr17 58208128 58208151 -27230329 + (CAG)n Simple_repeat Simple_repeat 1 23 0 22 70 0 0 chr17 58208258 58208301 -27230179 + GC_rich Low_complexity Low_complexity 1 43 0 270 73 0 0 chr17 58208941 58208982 -27229498 + (TG)n Simple_repeat Simple_repeat 2 42 0 886 133 7 7 chr17 58209351 58209494 -27228986 + AluJo SINE Alu 88 230 -82 1929 121 4 7 chr17 58209689 58209969 -27228511 + AluSx SINE Alu 5 283 -29 764 176 8 0 chr17 58210130 58210255 -27228225 + FLAM_C SINE Alu 6 131 -12 213 208 0 19 chr17 58210270 58210323 -27228157 + (TGGA)n Simple_repeat Simple_repeat 3 54 0 3296 138 83 51 chr17 58210725 58211426 -27227054 - LTR8A LTR ERV1 0 727 5 1912 98 76 0 chr17 58211537 58211814 -27226666 + AluSx SINE Alu 1 298 -14 243 224 30 0 chr17 58212007 58212074 -27226406 - MLT1B LTR MaLR -142 248 180 633 242 54 0 chr17 58212084 58212233 -27226247 + MER41C LTR ERV1 1 157 -397 * 3573 104 5 61 chr17 58212224 58212782 -27225698 + LTR8 LTR ERV1 165 691 0 809 237 9 83 chr17 58212851 58213176 -27225304 + L1M4 LINE L1 3722 4022 -2124 4939 82 22 1 chr17 58213200 58213847 -27224633 - PABL_A LTR ERV1 0 660 1 18548 63 48 28 chr17 58213847 58214478 -27224002 - PABL_A-int LTR ERV1 0 5015 4399 2077 141 0 0 chr17 58214478 58214777 -27223703 - AluSc SINE Alu -10 299 1 18548 63 48 28 chr17 58214777 58215408 -27223072 - PABL_A-int LTR ERV1 -616 4399 3783 2083 120 7 10 chr17 58215408 58215709 -27222771 + AluSx SINE Alu 1 300 -12 18548 63 48 28 chr17 58215709 58216237 -27222243 - PABL_A-int LTR ERV1 -1232 3783 3267 1500 90 0 0 chr17 58216237 58216426 -27222054 + AluY SINE Alu 112 300 -11 18548 63 48 28 chr17 58216426 58217201 -27221279 - PABL_A-int LTR ERV1 -1748 3267 2395 755 19 39 19 chr17 58217178 58217282 -27221198 - PABL_A-int LTR ERV1 -2864 2151 2046 * 360 0 0 0 chr17 58217283 58217323 -27221157 + (TA)n Simple_repeat Simple_repeat 2 41 0 1121 90 0 0 chr17 58217326 58217471 -27221009 - AluY SINE Alu 0 311 167 1322 43 27 5 chr17 58217471 58217656 -27220824 - PABL_A-int LTR ERV1 -2965 2050 1862 883 138 252 52 chr17 58217656 58217685 -27220795 + LTR8 LTR ERV1 1 23 -668 723 36 0 0 chr17 58217685 58217769 -27220711 + L1PA2 LINE L1 6066 6149 -6 883 138 252 52 chr17 58217769 58217949 -27220531 + LTR8 LTR ERV1 23 252 -439 3992 56 2 0 chr17 58217950 58218453 -27220027 - PABL_A-int LTR ERV1 -3362 1653 1150 * 6152 90 36 27 chr17 58218446 58218617 -27219863 - PABL_A-int LTR ERV1 -4120 895 727 2028 116 41 3 chr17 58218617 58218910 -27219570 + AluY SINE Alu 1 304 -7 6152 90 36 27 chr17 58218910 58219032 -27219448 - PABL_A-int LTR ERV1 -4288 727 608 2259 114 0 7 chr17 58219032 58219339 -27219141 - AluSg SINE Alu -5 305 1 6152 90 36 27 chr17 58219339 58219931 -27218549 - PABL_A-int LTR ERV1 -4407 608 1 3096 55 3 5 chr17 58219931 58220311 -27218169 - PABL_A LTR ERV1 0 660 282 1879 185 84 36 chr17 58220328 58220766 -27217714 + LTR2B LTR ERV1 32 490 0 1975 75 0 0 chr17 58220766 58221020 -27217460 + Harlequin LTR ERV1 1 254 -6642 836 257 19 15 chr17 58221020 58221285 -27217195 + L1MC/D LINE L1 4424 4689 -1457 1194 80 0 7 chr17 58221302 58221452 -27217028 + AluSx SINE Alu 10 158 -154 877 235 115 0 chr17 58221452 58221652 -27216828 + AluJo SINE Alu 73 295 -17 1056 136 32 0 chr17 58221653 58221807 -27216673 + AluSx SINE Alu 1 159 -153 1471 129 0 0 chr17 58221808 58222018 -27216462 + AluSg/x SINE Alu 101 310 0 787 228 11 11 chr17 58222018 58222207 -27216273 + L1MC/D LINE L1 4764 4952 -1194 766 199 20 14 chr17 58222235 58222381 -27216099 + AluJo SINE Alu 127 273 -39 1697 105 0 4 chr17 58222389 58222618 -27215862 + AluSq SINE Alu 1 228 -85 967 176 135 43 chr17 58222618 58222758 -27215722 + L1MC/D LINE L1 5124 5250 -992 3116 70 16 0 chr17 58222758 58223129 -27215351 - MER51B LTR ERV1 0 377 1 967 176 135 43 chr17 58223129 58223288 -27215192 + L1MC/D LINE L1 5250 5448 -794 1713 182 7 10 chr17 58223288 58223596 -27214884 + AluJb SINE Alu 1 307 -5 967 176 135 43 chr17 58223596 58223675 -27214805 + L1MC/D LINE L1 5448 5518 -724 239 88 0 0 chr17 58223675 58223709 -27214771 - Alu SINE Alu -269 34 1 1059 163 4 83 chr17 58223709 58223949 -27214531 + MER41B LTR ERV1 322 542 -93 1519 159 89 0 chr17 58223950 58224220 -27214260 + AluSx SINE Alu 1 294 -18 298 219 38 150 chr17 58224276 58224325 -27214155 + MIR SINE MIR 60 113 -149 2141 136 0 0 chr17 58224325 58224620 -27213860 - AluSx SINE Alu -17 295 1 298 219 38 150 chr17 58224620 58224730 -27213750 + MIR SINE MIR 113 201 -61 749 224 128 22 chr17 58224730 58225043 -27213437 + Charlie2 DNA MER1_type 2517 2862 0 218 207 17 17 chr17 58225662 58225720 -27212760 + G-rich Low_complexity Low_complexity 5 62 0 2358 101 0 0 chr17 58225801 58226109 -27212371 - AluSx SINE Alu -4 308 1 2097 80 17 43 chr17 58226116 58226417 -27212063 - AluSx SINE Alu -19 293 1 1786 142 17 24 chr17 58226987 58227283 -27211197 - AluJo SINE Alu -13 299 6 793 164 8 0 chr17 58228560 58228688 -27209792 - MLT1B LTR MaLR 0 390 262 46 0 0 46 chr17 58228688 58228713 -27209767 + AT_rich Low_complexity Low_complexity 1 26 -36 2253 104 0 7 chr17 58228713 58229012 -27209468 - AluSx SINE Alu -14 298 2 46 0 0 46 chr17 58229012 58229051 -27209429 + AT_rich Low_complexity Low_complexity 26 62 0 337 93 0 0 chr17 58229051 58229094 -27209386 - MER57B LTR ERV1 -66 368 326 1700 121 87 0 chr17 58229098 58229363 -27209117 - AluJo SINE Alu -24 288 1 1719 167 3 11 chr17 58229457 58229773 -27208707 + AluJb SINE Alu 1 314 0 1545 173 3 58 chr17 58229795 58230107 -27208373 + AluJo SINE Alu 1 295 -17 301 305 90 12 chr17 58230408 58230575 -27207905 - L1MC/D LINE L1 -2084 5724 5545 278 244 165 47 chr17 58230688 58230815 -27207665 - MIR SINE MIR -79 183 42 2009 116 10 7 chr17 58230987 58231280 -27207200 + AluSx SINE Alu 1 294 -18 756 186 24 0 chr17 58231532 58231656 -27206824 - FLAM_A SINE Alu -2 131 5 2320 86 0 10 chr17 58231772 58232073 -27206407 - AluSc SINE Alu -11 298 1 1332 149 36 44 chr17 58232805 58232919 -27205561 - AluJo SINE Alu -65 247 134 2628 56 0 0 chr17 58232919 58233221 -27205259 - AluY SINE Alu -9 302 1 1332 149 36 44 chr17 58233221 58233355 -27205125 - AluJo SINE Alu -178 134 1 1186 190 95 52 chr17 58233504 58233534 -27204946 - MLT2B1 LTR ERVL -10 404 377 234 116 0 0 chr17 58233534 58233577 -27204903 + (CA)n Simple_repeat Simple_repeat 2 44 0 1186 190 95 52 chr17 58233577 58233906 -27204574 - MLT2B1 LTR ERVL -37 377 60 1972 149 0 31 chr17 58234242 58234564 -27203916 + AluSx SINE Alu 1 312 0 330 179 15 0 chr17 58234710 58234777 -27203703 - MLT2B1 LTR ERVL -452 68 1 362 318 155 5 chr17 58234947 58235151 -27203329 + MIR SINE MIR 17 249 -13 26 30 0 0 chr17 58237193 58237226 -27201254 + AT_rich Low_complexity Low_complexity 1 33 0 852 150 0 23 chr17 58237226 58237359 -27201121 - FLAM_C SINE Alu -13 130 1 2410 78 0 16 chr17 58237912 58238218 -27200262 + AluY SINE Alu 1 301 -10 444 273 83 0 chr17 58238335 58238456 -27200024 + MER94 DNA DNA 4 134 0 2045 133 14 0 chr17 58238580 58238866 -27199614 + AluSx SINE Alu 1 290 -22 240 302 0 0 chr17 58239008 58239071 -27199409 + MARNA DNA Mariner 246 308 -278 513 178 0 0 chr17 58239704 58239805 -27198675 - L1MB2 LINE L1 -1 6170 6070 2160 115 0 0 chr17 58240335 58240623 -27197857 + AluSx SINE Alu 1 288 -24 1966 156 10 0 chr17 58240999 58241294 -27197186 - AluSx SINE Alu -14 298 1 278 50 25 0 chr17 58241294 58241334 -27197146 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2196 92 7 0 chr17 58241334 58241615 -27196865 - AluY SINE Alu -28 283 1 2447 65 3 0 chr17 58241746 58242040 -27196440 - AluY SINE Alu -16 295 1 1546 169 19 4 chr17 58242221 58242487 -27195993 + AluJb SINE Alu 37 306 -6 4713 154 106 46 chr17 58242521 58243534 -27194946 + Tigger6a DNA MER2_type 7 1079 -4 2235 120 0 0 chr17 58243535 58243827 -27194653 + AluSx SINE Alu 1 292 -20 534 234 88 6 chr17 58244591 58244762 -27193718 - L1ME3A LINE L1 -10 6160 5976 1969 122 10 40 chr17 58244771 58245074 -27193406 - AluSx SINE Alu -18 294 1 2409 72 0 10 chr17 58245192 58245498 -27192982 - AluY SINE Alu -8 303 1 1776 133 7 36 chr17 58245940 58246242 -27192238 + AluJb SINE Alu 1 293 -19 234 0 0 0 chr17 58246581 58246607 -27191873 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1922 119 37 0 chr17 58246614 58246883 -27191597 - AluSx SINE Alu -33 279 1 819 105 7 85 chr17 58246885 58247038 -27191442 - FLAM_C SINE Alu -2 141 1 370 186 58 12 chr17 58248624 58248710 -27189770 - MER112 DNA MER1_type -42 218 129 2266 80 0 17 chr17 58248721 58249020 -27189460 - AluSx SINE Alu -18 294 1 1009 184 31 103 chr17 58249505 58249826 -27188654 - LTR41 LTR ERVL -3 770 473 2596 156 139 80 chr17 58249829 58250106 -27188374 - Charlie1a DNA MER1_type -1975 786 527 1596 98 0 9 chr17 58250106 58250320 -27188160 + AluSg/x SINE Alu 80 291 -19 2596 156 139 80 chr17 58250320 58250784 -27187696 - Charlie1a DNA MER1_type -2234 527 1 1961 147 0 0 chr17 58251106 58251392 -27187088 - AluSx SINE Alu -26 286 1 182 304 134 0 chr17 58251708 58251820 -27186660 - MIR3 SINE MIR -11 197 71 * 525 284 138 5 chr17 58251815 58252033 -27186447 + MIR SINE MIR 13 259 -3 2052 116 10 13 chr17 58252385 58252686 -27185794 + AluSx SINE Alu 1 300 -12 496 66 0 0 chr17 58252963 58253024 -27185456 + AluSc SINE Alu 231 291 -18 1721 157 17 14 chr17 58253050 58253344 -27185136 + AluJo SINE Alu 5 299 -13 854 207 103 0 chr17 58253649 58253852 -27184628 - MIR SINE MIR -29 233 10 942 162 19 7 chr17 58253955 58254109 -27184371 + AluJb SINE Alu 140 295 -17 1940 133 58 0 chr17 58254217 58254495 -27183985 - AluSx SINE Alu -18 294 1 14747 108 123 85 chr17 58254501 58257073 -27181407 - MER4A-int LTR ERV1 -304 6240 3767 2331 81 0 7 chr17 58257073 58257370 -27181110 - AluSq SINE Alu -18 295 1 14747 108 123 85 chr17 58257370 58258049 -27180431 - MER4A-int LTR ERV1 -2777 3767 3115 2438 74 0 0 chr17 58258049 58258348 -27180132 - AluY SINE Alu -12 299 1 14747 108 123 85 chr17 58258348 58258394 -27180086 - MER4A-int LTR ERV1 -3429 3115 3072 2423 81 0 0 chr17 58258394 58258690 -27179790 + AluY SINE Alu 1 296 -15 14747 108 123 85 chr17 58258690 58259845 -27178635 - MER4A-int LTR ERV1 -3472 3072 682 277 114 0 45 chr17 58259866 58259910 -27178570 - LTR49 LTR ERV1 -283 312 271 279 109 109 78 chr17 58259910 58259974 -27178506 - MER4A-int LTR ERV1 -5846 752 687 3001 70 72 12 chr17 58259993 58260409 -27178071 - MER4A-int LTR ERV1 -6157 441 1 1644 169 6 42 chr17 58260412 58260461 -27178019 - MER4A LTR ERV1 0 664 615 2726 39 0 0 chr17 58260461 58260772 -27177708 + AluY SINE Alu 1 311 0 1644 169 6 42 chr17 58260772 58261075 -27177405 - MER4A LTR ERV1 -49 615 266 658 59 20 49 chr17 58261077 58261179 -27177301 - MER4A LTR ERV1 -565 99 1 1058 96 48 75 chr17 58261179 58261355 -27177125 - L1MC/D LINE L1 -743 5403 5285 1165 139 0 6 chr17 58261355 58261520 -27176960 - FRAM SINE Alu -2 164 1 1058 96 48 75 chr17 58261520 58261571 -27176909 - L1MC/D LINE L1 -861 5285 5234 2228 238 26 6 chr17 58261571 58262255 -27176225 - MER83B-int LTR ERV1 -1146 3734 1000 424 207 0 0 chr17 58262255 58262337 -27176143 - L1MC/D LINE L1 -880 5266 5185 2284 114 0 0 chr17 58262397 58262695 -27175785 + AluSx SINE Alu 1 298 -14 2432 84 0 0 chr17 58262697 58262993 -27175487 + AluSc SINE Alu 1 296 -13 1922 168 3 0 chr17 58263114 58263417 -27175063 + AluJo SINE Alu 1 304 -8 516 174 0 12 chr17 58263596 58263682 -27174798 - FLAM SINE Alu -16 127 43 298 234 0 39 chr17 58263698 58263775 -27174705 + L1MEc LINE L1 2017 2090 -4306 * 915 202 8 69 chr17 58263762 58264017 -27174463 + L1MEc LINE L1 2890 3128 -3087 338 196 43 11 chr17 58264033 58264125 -27174355 + L1MEc LINE L1 3992 4086 -2129 * 6416 204 43 44 chr17 58264119 58264336 -27174144 + L1MB7 LINE L1 3084 3300 -2846 2246 108 7 3 chr17 58264336 58264641 -27173839 + AluSg1 SINE Alu 1 306 -3 6416 204 43 44 chr17 58264641 58265748 -27172732 + L1MB7 LINE L1 3300 4407 -1739 2127 124 3 31 chr17 58265748 58266070 -27172410 + AluSp SINE Alu 1 313 0 6416 204 43 44 chr17 58266070 58266711 -27171769 + L1MB7 LINE L1 4407 5047 -1099 1931 139 66 0 chr17 58266711 58266998 -27171482 + AluJo SINE Alu 1 306 -6 3812 164 38 33 chr17 58266998 58267836 -27170644 + L1MB7 LINE L1 5325 6166 -18 382 244 64 96 chr17 58267896 58268053 -27170427 + L1M4 LINE L1 3331 3482 -2664 312 280 0 0 chr17 58268059 58268159 -27170321 + L1M4 LINE L1 3437 3536 -2610 316 94 0 38 chr17 58268183 58268236 -27170244 - MER4B LTR ERV1 -61 549 499 239 157 20 0 chr17 58268250 58268301 -27170179 + HAL1 LINE L1 1113 1164 -1343 1068 239 78 12 chr17 58268328 58268662 -27169818 + L1M4 LINE L1 3543 3898 -2248 2316 79 7 7 chr17 58269392 58269682 -27168798 + AluSx SINE Alu 7 296 -16 576 0 0 0 chr17 58269701 58269765 -27168715 + (TTCC)n Simple_repeat Simple_repeat 4 67 0 1950 126 7 31 chr17 58269772 58270066 -27168414 - AluSx SINE Alu -25 287 1 258 216 68 14 chr17 58270066 58270140 -27168340 - MIR SINE MIR -60 202 125 246 245 0 0 chr17 58270563 58270612 -27167868 + MIR SINE MIR 90 138 -124 1002 182 0 28 chr17 58270722 58270898 -27167582 + AluJo SINE Alu 11 181 -131 274 77 77 0 chr17 58270934 58270986 -27167494 + A-rich Low_complexity Low_complexity 4 59 0 285 155 0 0 chr17 58271528 58271586 -27166894 + GA-rich Low_complexity Low_complexity 2 59 0 188 260 20 0 chr17 58273079 58273129 -27165351 - MIR3 SINE MIR -17 191 141 1703 123 30 53 chr17 58273181 58273483 -27164997 - AluJb SINE Alu -13 299 5 309 365 66 11 chr17 58273539 58273720 -27164760 - MIR SINE MIR -57 205 15 286 267 48 9 chr17 58273938 58274043 -27164437 + MIR3 SINE MIR 78 186 -22 858 145 15 0 chr17 58274285 58274416 -27164064 - FLAM_A SINE Alu 0 133 1 1663 197 3 16 chr17 58274428 58274733 -27163747 - AluJo SINE Alu -11 301 1 2404 78 3 0 chr17 58274745 58275040 -27163440 - AluSg SINE Alu -14 296 1 1891 161 7 13 chr17 58275052 58275356 -27163124 - AluJo SINE Alu -10 302 1 933 197 52 10 chr17 58276233 58276426 -27162054 + MIR SINE MIR 56 256 -6 2271 123 0 0 chr17 58276638 58276938 -27161542 - AluJb SINE Alu -12 300 1 199 214 71 0 chr17 58277294 58277364 -27161116 + MIR SINE MIR 81 155 -107 367 286 184 16 chr17 58277374 58277559 -27160921 - MIR SINE MIR 0 262 47 1350 228 169 18 chr17 58278214 58278653 -27159827 - MLT1D LTR MaLR 0 505 1 355 297 71 19 chr17 58278862 58279017 -27159463 + MIR SINE MIR 48 210 -52 649 299 71 51 chr17 58279018 58279510 -27158970 - MLT1J LTR MaLR 0 511 10 2251 121 0 3 chr17 58279546 58279843 -27158637 + AluSq SINE Alu 1 296 -17 862 177 98 17 chr17 58279932 58280235 -27158245 - MSTD LTR MaLR 0 396 1 1133 209 83 10 chr17 58280282 58280352 -27158128 - MER33 DNA MER1_type -2261 324 261 1420 177 51 63 chr17 58280352 58280668 -27157812 - AluJo SINE Alu 0 312 1 1133 209 83 10 chr17 58280668 58280898 -27157582 - MER33 DNA MER1_type -2324 261 2 1672 93 0 5 chr17 58280948 58281191 -27157289 - AluSc SINE Alu 0 311 70 738 289 111 34 chr17 58281260 58281807 -27156673 - L1ME3A LINE L1 -215 5947 5479 2579 195 100 12 chr17 58282217 58282817 -27155663 - MLT1E1 LTR MaLR 0 654 2 2259 154 44 49 chr17 58282867 58282917 -27155563 - MSTB LTR MaLR 0 426 377 2294 107 10 0 chr17 58282917 58283225 -27155255 - AluSq SINE Alu -2 311 1 2259 154 44 49 chr17 58283225 58283602 -27154878 - MSTB LTR MaLR -49 377 1 203 241 111 19 chr17 58283984 58284038 -27154442 + L2 LINE L2 3249 3307 -6 363 261 204 14 chr17 58284443 58284585 -27153895 + MIR3 SINE MIR 16 184 -24 187 108 27 27 chr17 58284560 58284597 -27153883 + L3 LINE CR1 1533 1569 -8 * 617 288 134 67 chr17 58285266 58285944 -27152536 + L2 LINE L2 2445 3184 -88 1651 169 26 55 chr17 58285944 58286117 -27152363 - AluJo SINE Alu -13 299 137 2254 119 0 0 chr17 58286117 58286412 -27152068 - AluSx SINE Alu -17 295 1 1651 169 26 55 chr17 58286412 58286546 -27151934 - AluJo SINE Alu -175 137 1 617 288 134 67 chr17 58286546 58286606 -27151874 + L2 LINE L2 3184 3239 -33 197 278 139 26 chr17 58286808 58286923 -27151557 - MIR SINE MIR -58 204 77 453 216 111 33 chr17 58287671 58287852 -27150628 - MER106A DNA MER1_type -39 197 3 759 181 5 98 chr17 58289106 58289223 -27149257 - MER5A DNA MER1_type -13 176 82 1813 168 0 27 chr17 58289223 58289521 -27148959 - AluJo SINE Alu -22 290 1 759 181 5 98 chr17 58289521 58289596 -27148884 - MER5A DNA MER1_type -107 82 2 1738 153 3 57 chr17 58289660 58289974 -27148506 - AluJb SINE Alu -15 297 1 749 213 36 62 chr17 58290032 58290257 -27148223 - L1ME2 LINE L1 -9 6155 5937 2430 97 0 3 chr17 58291795 58292103 -27146377 + AluSx SINE Alu 1 307 -5 188 295 95 32 chr17 58292107 58292202 -27146278 + MER5A DNA MER1_type 61 161 -28 296 246 218 7 chr17 58292248 58292390 -27146090 - MER5B DNA MER1_type -2 176 5 310 345 129 0 chr17 58292408 58292602 -27145878 + L2 LINE L2 1839 2057 -1257 195 325 38 12 chr17 58293041 58293121 -27145359 - MIR SINE MIR -55 153 72 515 336 60 49 chr17 58293169 58293616 -27144864 + L2 LINE L2 2821 3272 0 741 216 3 3 chr17 58293643 58293993 -27144487 + (TGGA)n Simple_repeat Simple_repeat 1 350 0 186 271 82 71 chr17 58296877 58296962 -27141518 - MIR3 SINE MIR -4 204 119 274 233 42 106 chr17 58297656 58297845 -27140635 + L1MC5 LINE L1 7755 7931 -30 883 281 81 68 chr17 58297963 58298640 -27139840 + MER21B LTR ERV1 24 709 -154 205 182 0 0 chr17 58299000 58299033 -27139447 + (TG)n Simple_repeat Simple_repeat 1 33 0 2196 119 20 0 chr17 58300008 58300310 -27138170 - AluSx SINE Alu -4 308 1 230 333 46 9 chr17 58300342 58300450 -27138030 + L3 LINE CR1 1360 1471 -106 381 282 80 58 chr17 58300502 58300525 -27137955 - HAL1b LINE L1 0 1348 1327 2310 130 13 21 chr17 58300525 58300903 -27137577 + THE1C LTR MaLR 1 375 0 381 282 80 58 chr17 58300903 58301067 -27137413 - HAL1b LINE L1 -21 1327 1157 521 227 121 0 chr17 58302309 58302450 -27136030 - MIR SINE MIR -72 190 33 334 274 97 0 chr17 58303089 58303202 -27135278 + L1ME4a LINE L1 5714 5837 -284 23 54 0 0 chr17 58303209 58303246 -27135234 + AT_rich Low_complexity Low_complexity 1 37 0 246 236 132 9 chr17 58303285 58303391 -27135089 + L1ME4a LINE L1 5970 6088 -33 23 0 0 0 chr17 58305517 58305540 -27132940 + AT_rich Low_complexity Low_complexity 1 23 0 336 256 65 36 chr17 58305540 58305708 -27132772 + MER104 DNA Tc2 8 180 0 186 43 0 0 chr17 58306261 58306284 -27132196 + (CA)n Simple_repeat Simple_repeat 2 24 0 772 178 0 7 chr17 58306318 58306453 -27132027 + AluJo SINE Alu 2 135 -177 1986 202 55 12 chr17 58309133 58309534 -27128946 + MER47B DNA MER2_type 1 418 0 1747 102 0 33 chr17 58309688 58309933 -27128547 + AluSq SINE Alu 1 237 -76 244 264 139 47 chr17 58310068 58310197 -27128283 + MIR SINE MIR 119 259 -3 369 298 0 11 chr17 58310368 58310462 -27128018 - MER5B DNA MER1_type -84 94 2 377 271 14 71 chr17 58310474 58310614 -27127866 + MER5A DNA MER1_type 4 135 -54 1672 117 62 0 chr17 58310887 58311144 -27127336 - AluSx SINE Alu -39 273 1 1944 108 27 30 chr17 58311183 58311479 -27127001 + AluY SINE Alu 1 295 -16 527 191 19 9 chr17 58311736 58311841 -27126639 + FLAM_A SINE Alu 18 123 -19 225 319 77 11 chr17 58312140 58312231 -27126249 - L1M4 LINE L1 -1826 4320 4224 800 180 48 6 chr17 58312287 58312454 -27126026 + MER5B DNA MER1_type 5 178 0 1283 131 112 67 chr17 58312460 58312728 -27125752 + AluSx SINE Alu 1 280 -32 22 0 0 30 chr17 58312897 58312908 -27125572 + AT_rich Low_complexity Low_complexity 1 11 -21 1561 107 5 5 chr17 58312908 58313123 -27125357 - AluSp SINE Alu -14 299 85 22 0 0 30 chr17 58313123 58313144 -27125336 + AT_rich Low_complexity Low_complexity 11 32 0 2002 134 29 10 chr17 58313307 58313487 -27124993 - AluSx SINE Alu 0 312 122 297 51 0 0 chr17 58313487 58313526 -27124954 + (TG)n Simple_repeat Simple_repeat 2 40 0 2002 134 29 10 chr17 58313526 58313651 -27124829 - AluSx SINE Alu -190 122 1 2385 69 10 23 chr17 58314890 58315194 -27123286 + AluY SINE Alu 1 300 -11 454 202 19 29 chr17 58316976 58317080 -27121400 + MER3 DNA MER1_type 52 154 -55 195 42 0 0 chr17 58318466 58318490 -27119990 + (A)n Simple_repeat Simple_repeat 1 24 0 1469 147 57 39 chr17 58318505 58318784 -27119696 + AluJb SINE Alu 8 291 -21 343 244 139 0 chr17 58318953 58319039 -27119441 - HAL1 LINE L1 -1871 636 539 1697 156 30 17 chr17 58319045 58319347 -27119133 + AluJo SINE Alu 1 306 -6 356 261 236 35 chr17 58319571 58320223 -27118257 + HAL1 LINE L1 1672 2454 -53 481 206 194 7 chr17 58320717 58320872 -27117608 + MER105 DNA DNA 1 184 -20 338 325 16 32 chr17 58320918 58321106 -27117374 - L2 LINE L2 -222 3050 2866 1462 185 14 28 chr17 58321962 58322275 -27116205 + AluJo SINE Alu 1 309 0 244 192 64 103 chr17 58323254 58323332 -27115148 + MIR SINE MIR 113 187 -75 702 228 88 5 chr17 58324354 58324547 -27113933 + MER3 DNA MER1_type 1 209 0 21 0 0 0 chr17 58324594 58324615 -27113865 + AT_rich Low_complexity Low_complexity 1 21 0 36 53 0 0 chr17 58328594 58328651 -27109829 + GC_rich Low_complexity Low_complexity 1 57 0 2572 36 0 0 chr17 58329707 58330010 -27108470 - AluY SINE Alu -8 303 1 309 267 151 71 chr17 58330026 58330251 -27108229 - L2 LINE L2 -244 3069 2827 319 240 190 51 chr17 58330355 58330503 -27107977 + L2 LINE L2 2895 3021 -251 1938 107 27 10 chr17 58330503 58330803 -27107677 - AluSx SINE Alu -7 305 1 319 240 190 51 chr17 58330803 58330825 -27107655 + L2 LINE L2 3021 3039 -233 342 0 0 0 chr17 58330825 58330863 -27107617 + (CA)n Simple_repeat Simple_repeat 2 39 0 189 0 0 0 chr17 58330862 58330883 -27107597 + (TC)n Simple_repeat Simple_repeat 1 21 0 * 319 240 190 51 chr17 58330863 58331014 -27107466 + L2 LINE L2 3039 3272 0 * 861 297 90 52 chr17 58331005 58331538 -27106942 - L2 LINE L2 -548 2766 2198 2200 100 10 13 chr17 58331538 58331849 -27106631 + AluSg SINE Alu 1 310 0 861 297 90 52 chr17 58331849 58332012 -27106468 - L2 LINE L2 -1116 2198 2043 231 36 0 0 chr17 58332680 58332708 -27105772 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1601 197 0 0 chr17 58333162 58333456 -27105024 + AluJo SINE Alu 16 309 -3 1437 177 3 61 chr17 58333473 58333623 -27104857 + AluJo SINE Alu 1 125 -187 1846 133 0 20 chr17 58333623 58333925 -27104555 + AluJo SINE Alu 1 296 -16 1437 177 3 61 chr17 58333925 58334084 -27104396 + AluJo SINE Alu 125 292 -20 207 308 173 0 chr17 58334394 58334498 -27103982 - MIR SINE MIR -3 259 138 2049 179 33 60 chr17 58334671 58334851 -27103629 + MLT1C LTR MaLR 1 184 -283 1603 164 0 0 chr17 58334851 58335113 -27103367 + AluY SINE Alu 1 262 -49 2289 78 0 3 chr17 58335123 58335419 -27103061 + AluY SINE Alu 1 295 -16 2049 179 33 60 chr17 58335419 58335707 -27102773 + MLT1C LTR MaLR 193 467 0 518 331 6 22 chr17 58336695 58336873 -27101607 - MER91A DNA MER1_type 0 196 22 1696 168 0 30 chr17 58337097 58337400 -27101080 + AluJo SINE Alu 1 294 -18 798 273 81 53 chr17 58337432 58337828 -27100652 + L1ME3A LINE L1 5542 5948 -222 21 0 0 0 chr17 58338020 58338041 -27100439 + AT_rich Low_complexity Low_complexity 1 21 0 824 209 139 0 chr17 58338181 58338368 -27100112 + MIR SINE MIR 50 262 0 274 273 0 0 chr17 58338411 58338477 -27100003 - L2 LINE L2 -5 3308 3243 540 220 289 21 chr17 58338694 58339131 -27099349 - MLT1H LTR MaLR 0 590 1 431 91 0 192 chr17 58339232 58339284 -27099196 - MADE1 DNA Mariner 0 80 54 2135 91 25 0 chr17 58339284 58339570 -27098910 + AluSx SINE Alu 1 293 -19 431 91 0 192 chr17 58339570 58339616 -27098864 - MADE1 DNA Mariner -26 54 1 183 129 0 0 chr17 58339665 58339696 -27098784 + (A)n Simple_repeat Simple_repeat 1 31 0 357 278 33 71 chr17 58339726 58339938 -27098542 + MIR SINE MIR 30 233 -29 569 280 63 37 chr17 58340138 58340409 -27098071 + L1ME LINE L1 5545 5822 -299 1062 146 0 0 chr17 58340544 58340708 -27097772 - AluJb SINE Alu -8 304 141 285 314 58 66 chr17 58340886 58341023 -27097457 - MER5B DNA MER1_type -41 137 2 323 219 211 0 chr17 58341702 58341816 -27096664 + MER103 DNA DNA 2 139 -27 421 317 26 29 chr17 58342014 58342355 -27096125 + L1M4 LINE L1 4228 4567 -1579 1522 160 29 52 chr17 58342399 58342706 -27095774 + AluSx SINE Alu 1 300 -12 2354 68 0 0 chr17 58342857 58343150 -27095330 + AluY SINE Alu 1 293 -18 2149 106 7 3 chr17 58343179 58343482 -27094998 - AluSq SINE Alu -9 304 1 384 255 75 9 chr17 58343719 58343825 -27094655 + MLT1K LTR MaLR 143 255 -333 351 217 187 30 chr17 58343839 58344005 -27094475 + MLT1K LTR MaLR 379 570 -18 252 174 0 72 chr17 58343943 58344012 -27094468 + LTR67 LTR ERVL 484 547 -10 * 1634 231 118 77 chr17 58344054 58344353 -27094127 - MLT2E LTR ERVL -1 627 342 1761 150 0 14 chr17 58344353 58344669 -27093811 + AluSx SINE Alu 1 312 0 1634 231 118 77 chr17 58344669 58344962 -27093518 - MLT2E LTR ERVL -286 342 10 301 197 45 114 chr17 58345391 58345523 -27092957 - AluJb SINE Alu 0 302 180 379 195 73 8 chr17 58345866 58345974 -27092506 + FRAM SINE Alu 71 138 -28 180 97 0 0 chr17 58345974 58346005 -27092475 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1972 110 18 0 chr17 58347293 58347566 -27090914 + AluSx SINE Alu 11 288 -24 348 64 0 0 chr17 58347568 58347615 -27090865 + (TG)n Simple_repeat Simple_repeat 2 48 0 2324 148 27 59 chr17 58347759 58347828 -27090652 - MSTC LTR MaLR -1 427 357 2216 113 0 0 chr17 58347828 58348137 -27090343 + AluSg SINE Alu 2 310 0 2324 148 27 59 chr17 58348137 58348506 -27089974 - MSTC LTR MaLR -71 357 3 1949 181 164 5 chr17 58348688 58349120 -27089360 + MLT1D LTR MaLR 5 505 0 719 171 187 20 chr17 58349162 58349261 -27089219 + MER33 DNA MER1_type 5 86 -2538 2077 119 3 0 chr17 58349261 58349563 -27088917 + AluSx SINE Alu 1 303 -9 719 171 187 20 chr17 58349563 58349719 -27088761 + MER33 DNA MER1_type 86 363 0 1676 155 37 0 chr17 58349760 58350057 -27088423 - AluJb SINE Alu 0 312 5 477 235 101 8 chr17 58350262 58350381 -27088099 - MER69A DNA AcHobo -47 130 1 4596 183 176 44 chr17 58350492 58351279 -27087201 + Zaphod DNA AcHobo 5 687 -3344 1859 123 3 35 chr17 58351279 58351595 -27086885 + AluSx SINE Alu 1 306 -6 1148 73 17 6 chr17 58351605 58351783 -27086697 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4596 183 176 44 chr17 58351783 58351856 -27086624 + Zaphod DNA AcHobo 694 756 -3275 1791 77 117 11 chr17 58351856 58352129 -27086351 - AluYa8 SINE Alu -8 302 1 4596 183 176 44 chr17 58352129 58352610 -27085870 + Zaphod DNA AcHobo 756 1172 -2859 1892 124 31 3 chr17 58352610 58352900 -27085580 + AluSx SINE Alu 1 298 -14 4596 183 176 44 chr17 58352900 58353077 -27085403 + Zaphod DNA AcHobo 1172 1738 -2293 2358 73 0 0 chr17 58353164 58353465 -27085015 + AluSx SINE Alu 1 301 -11 946 164 50 110 chr17 58353466 58353599 -27084881 + Zaphod DNA AcHobo 1970 2109 -1922 789 193 0 15 chr17 58353599 58353734 -27084746 + FLAM_C SINE Alu 1 133 0 946 164 50 110 chr17 58353734 58353918 -27084562 + Zaphod DNA AcHobo 2109 2268 -1763 831 227 128 25 chr17 58353951 58354193 -27084287 - MLT1K LTR MaLR -10 578 312 1693 121 0 0 chr17 58354199 58354459 -27084021 + AluSx SINE Alu 54 313 0 454 184 6 137 chr17 58354460 58354628 -27083852 - Zaphod DNA AcHobo -106 3925 3780 * 1302 179 35 92 chr17 58354622 58354888 -27083592 - Zaphod DNA AcHobo -1685 2346 2109 741 215 0 15 chr17 58354888 58355023 -27083457 - FLAM_C SINE Alu 0 133 1 1302 179 35 92 chr17 58355023 58355159 -27083321 - Zaphod DNA AcHobo -1922 2109 1967 418 236 47 19 chr17 58355172 58355278 -27083202 + MLT1I LTR MaLR 26 134 -275 1598 111 0 13 chr17 58355332 58355507 -27082973 - AluSp SINE Alu -5 308 135 2238 97 3 0 chr17 58355507 58355806 -27082674 - AluSg SINE Alu -10 300 1 1598 111 0 13 chr17 58355806 58355865 -27082615 - AluSp SINE Alu -178 135 77 792 215 41 37 chr17 58355913 58356246 -27082234 + LTR54 LTR ERV1 94 508 -2 1213 232 12 4 chr17 58356392 58356646 -27081834 + MIR SINE MIR 7 262 0 292 133 0 0 chr17 58356751 58356796 -27081684 + L1MA9 LINE L1 5602 5646 -645 641 162 10 0 chr17 58356796 58356895 -27081585 + MER2 DNA MER2_type 1 100 -245 867 201 0 0 chr17 58356895 58357054 -27081426 + AluJb SINE Alu 134 292 -20 691 113 0 0 chr17 58357057 58357154 -27081326 + MER2 DNA MER2_type 93 189 -156 1446 165 7 26 chr17 58357158 58357292 -27081188 - AluJb SINE Alu -45 267 139 1879 112 0 85 chr17 58357292 58357623 -27080857 - AluSx SINE Alu -7 305 3 1446 165 7 26 chr17 58357623 58357760 -27080720 - AluJb SINE Alu -173 139 1 1991 110 7 0 chr17 58357778 58358092 -27080388 - AluSp SINE Alu 0 316 1 266 167 0 0 chr17 58358092 58358134 -27080346 - Alu SINE Alu -258 42 1 665 196 88 0 chr17 58358134 58358282 -27080198 + MER2 DNA MER2_type 185 345 0 3144 140 49 52 chr17 58358282 58358584 -27079896 + L1MA9 LINE L1 5645 5946 -366 1692 189 13 0 chr17 58358584 58358891 -27079589 + AluJo SINE Alu 1 311 -1 3144 140 49 52 chr17 58358891 58359236 -27079244 + L1MA9 LINE L1 5946 6290 -22 2030 111 7 13 chr17 58359880 58360186 -27078294 - AluSx SINE Alu -4 308 5 372 127 0 0 chr17 58360195 58360250 -27078230 + L1MC2 LINE L1 5932 5986 -358 908 113 0 0 chr17 58360250 58360383 -27078097 + AluSg/x SINE Alu 166 298 -12 522 48 58 0 chr17 58360383 58360486 -27077994 + (TA)n Simple_repeat Simple_repeat 1 109 0 456 163 23 0 chr17 58360490 58360576 -27077904 - L1MC2 LINE L1 -425 5919 5832 2257 83 3 16 chr17 58360588 58360900 -27077580 - AluSg SINE Alu -2 308 1 808 163 0 65 chr17 58361015 58361064 -27077416 - L1MB4 LINE L1 0 6180 6129 1964 127 20 0 chr17 58361064 58361356 -27077124 - AluSx SINE Alu -14 298 1 808 163 0 65 chr17 58361356 58361490 -27076990 - L1MB4 LINE L1 -51 6129 6009 973 186 0 0 chr17 58361505 58361661 -27076819 - FRAM SINE Alu -10 156 1 347 251 72 62 chr17 58362106 58362301 -27076179 - L1ME3A LINE L1 -9 6161 5965 1948 128 23 7 chr17 58362395 58362701 -27075779 + AluSx SINE Alu 1 311 -1 198 330 106 21 chr17 58362949 58363043 -27075437 + L2 LINE L2 3151 3252 -20 188 328 16 0 chr17 58363057 58363118 -27075362 + MIR SINE MIR 189 250 -12 1787 220 88 52 chr17 58363158 58363681 -27074799 + MLT1F LTR MaLR 1 542 0 294 327 31 26 chr17 58363724 58363984 -27074496 + LTR16A LTR ERVL 1 248 -216 1499 177 46 0 chr17 58364110 58364230 -27074250 + AluJo SINE Alu 1 114 -198 351 0 0 0 chr17 58364230 58364269 -27074211 + (CA)n Simple_repeat Simple_repeat 2 40 0 1499 177 46 0 chr17 58364269 58364431 -27074049 + AluJo SINE Alu 114 296 -16 578 259 0 29 chr17 58364436 58364575 -27073905 + MIR SINE MIR 19 153 -109 2208 98 0 3 chr17 58364645 58364941 -27073539 - AluSx SINE Alu -17 295 1 252 0 0 0 chr17 58365177 58365205 -27073275 + (TG)n Simple_repeat Simple_repeat 2 29 0 1532 157 13 60 chr17 58365205 58365504 -27072976 - AluJo SINE Alu -27 285 1 337 298 247 29 chr17 58365713 58365988 -27072492 + L2 LINE L2 2376 2710 -604 434 334 84 39 chr17 58366156 58366488 -27071992 + L2 LINE L2 2949 3295 -18 514 188 0 0 chr17 58366497 58366577 -27071903 - Tigger7 DNA MER2_type 0 2487 2408 2412 55 6 13 chr17 58366660 58366972 -27071508 + AluSg SINE Alu 1 310 0 540 133 33 50 chr17 58368521 58368641 -27069839 - Tigger7 DNA MER2_type -71 2416 2299 * 1580 184 85 0 chr17 58368638 58368931 -27069549 - Tigger7 DNA MER2_type -2169 318 1 2270 90 0 0 chr17 58368968 58369267 -27069213 - AluSx SINE Alu -13 299 1 1653 166 7 0 chr17 58369288 58369577 -27068903 - AluJb SINE Alu -10 302 12 1783 177 3 3 chr17 58369618 58369928 -27068552 - AluJb SINE Alu -2 310 1 539 250 9 0 chr17 58370796 58370912 -27067568 - MER77 LTR ERV1 -1 604 488 585 65 32 49 chr17 58370942 58371065 -27067415 + (GGAA)n Simple_repeat Simple_repeat 4 124 0 1221 148 48 0 chr17 58371073 58371111 -27067369 + AluJb SINE Alu 84 119 -358 200 33 0 33 chr17 58371111 58371141 -27067339 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1221 148 48 0 chr17 58371141 58371486 -27066994 + AluJb SINE Alu 119 477 0 323 245 31 0 chr17 58371490 58371588 -27066892 - L1ME LINE L1 -333 5788 5688 1027 197 129 9 chr17 58372099 58372332 -27066148 + AluSg SINE Alu 5 265 -45 773 244 28 57 chr17 58372404 58372442 -27066038 - MIR SINE MIR -9 253 215 1899 148 45 28 chr17 58372442 58372800 -27065680 + THE1B LTR MaLR 1 364 0 773 244 28 57 chr17 58372800 58373014 -27065466 - MIR SINE MIR -47 215 13 319 248 211 9 chr17 58373113 58373222 -27065258 - L2 LINE L2 -4 3309 3179 1661 188 21 0 chr17 58373340 58373628 -27064852 + AluJo SINE Alu 3 296 -16 1135 163 46 25 chr17 58373720 58373960 -27064520 + ORSL DNA AcHobo 3 247 -28 449 339 76 40 chr17 58373973 58374498 -27063982 - L2 LINE L2 -469 2845 2302 1326 171 77 7 chr17 58374683 58374957 -27063523 + AluJo SINE Alu 1 293 -19 244 183 0 42 chr17 58374961 58375032 -27063448 + GA-rich Low_complexity Low_complexity 2 69 0 863 262 34 13 chr17 58375032 58375269 -27063211 + MIR SINE MIR 21 262 0 377 328 184 0 chr17 58375929 58376103 -27062377 - MIR SINE MIR -37 225 20 1595 172 10 39 chr17 58376126 58376434 -27062046 + AluJb SINE Alu 1 299 -13 784 301 38 5 chr17 58376518 58376731 -27061749 - MIR SINE MIR -40 222 3 1285 157 29 0 chr17 58378254 58378464 -27060016 + AluJo SINE Alu 85 300 -12 1705 156 35 0 chr17 58378480 58378768 -27059712 + AluJb SINE Alu 7 304 -8 1432 152 104 11 chr17 58379282 58379552 -27058928 - AluJb SINE Alu -17 295 1 1622 164 0 63 chr17 58379655 58379972 -27058508 - AluJo SINE Alu -15 297 1 21 0 0 0 chr17 58380080 58380101 -27058379 + AT_rich Low_complexity Low_complexity 1 21 0 774 138 9 0 chr17 58380101 58380217 -27058263 - FLAM_C SINE Alu -15 118 2 2340 69 3 10 chr17 58380732 58381038 -27057442 - AluSq SINE Alu -9 304 1 1161 192 200 64 chr17 58381130 58381520 -27056960 - MLT1J LTR MaLR 0 511 69 306 263 26 90 chr17 58381667 58381805 -27056675 + L1ME4a LINE L1 5598 5743 -378 1583 152 7 11 chr17 58381805 58382082 -27056398 + AluJb SINE Alu 35 310 -2 306 263 26 90 chr17 58382082 58382185 -27056295 + L1ME4a LINE L1 5743 5817 -304 1601 163 3 33 chr17 58382185 58382485 -27055995 + AluJo SINE Alu 1 291 -21 306 263 26 90 chr17 58382485 58382554 -27055926 + L1ME4a LINE L1 5817 5889 -232 22 35 0 0 chr17 58382650 58382679 -27055801 + AT_rich Low_complexity Low_complexity 1 29 0 1987 131 7 0 chr17 58382679 58382984 -27055496 + AluSq SINE Alu 2 308 -5 1670 173 10 26 chr17 58383176 58383489 -27054991 - AluJo SINE Alu -3 309 2 23 0 0 0 chr17 58383757 58383780 -27054700 + AT_rich Low_complexity Low_complexity 1 23 0 2039 114 27 0 chr17 58383870 58384167 -27054313 + AluSp SINE Alu 1 305 -8 698 168 15 15 chr17 58384181 58384312 -27054168 + FLAM_C SINE Alu 12 142 -1 882 163 31 10 chr17 58384312 58384498 -27053982 + MLT1A1 LTR MaLR 78 365 0 542 212 124 73 chr17 58384572 58384848 -27053632 - MER21B LTR ERV1 -50 813 504 1634 67 5 36 chr17 58384852 58384891 -27053589 - MSTA LTR MaLR -2 426 387 2103 64 0 0 chr17 58384891 58385155 -27053325 + AluY SINE Alu 39 302 -9 1634 67 5 36 chr17 58385155 58385338 -27053142 - MSTA LTR MaLR -41 387 211 1293 101 0 0 chr17 58385348 58385526 -27052954 + MER41B LTR ERV1 1 178 -457 12635 103 30 17 chr17 58385527 58386548 -27051932 + MER41B-int LTR ERV1 2199 3205 -2741 2087 117 0 31 chr17 58386548 58386865 -27051615 + AluSx SINE Alu 1 307 -5 12635 103 30 17 chr17 58386865 58388458 -27050022 + MER41B-int LTR ERV1 3205 5229 -717 1999 138 3 0 chr17 58388458 58388755 -27049725 + AluSx SINE Alu 4 301 -11 12635 103 30 17 chr17 58388755 58389483 -27048997 + MER41B-int LTR ERV1 5229 5946 0 3076 127 96 0 chr17 58389484 58389965 -27048515 + MER41B LTR ERV1 2 528 -107 1316 173 0 35 chr17 58389976 58390230 -27048250 - AluSx SINE Alu -67 245 1 482 158 0 0 chr17 58390230 58390306 -27048174 + MER41A LTR ERV1 479 554 0 1247 171 0 0 chr17 58390306 58390505 -27047975 - MSTA LTR MaLR -229 199 1 * 1705 216 52 96 chr17 58390505 58391026 -27047454 - MER21B LTR ERV1 -361 502 5 1560 189 93 47 chr17 58391124 58391506 -27046974 + MSTD LTR MaLR 1 432 0 1886 146 7 3 chr17 58391567 58391875 -27046605 + AluSx SINE Alu 1 309 -3 365 255 41 20 chr17 58392171 58392269 -27046211 - L2 LINE L2 0 3272 3173 782 126 0 9 chr17 58392280 58392438 -27046042 - LTR35 LTR ERV1 -401 217 1 283 154 128 39 chr17 58392442 58392520 -27045960 - LTR35-int LTR ERV1 -4 6672 6588 30 27 0 0 chr17 58392643 58392680 -27045800 + AT_rich Low_complexity Low_complexity 1 37 0 2252 55 0 0 chr17 58392735 58393010 -27045470 - AluY SINE Alu 0 311 37 323 161 56 140 chr17 58393094 58393237 -27045243 - LTR35-int LTR ERV1 -277 6054 5924 2253 150 115 29 chr17 58393267 58393319 -27045161 - LTR35-int LTR ERV1 -541 5790 5744 3146 81 69 0 chr17 58393319 58393754 -27044726 - MER4C LTR ERV1 0 465 1 2253 150 115 29 chr17 58393754 58394188 -27044292 - LTR35-int LTR ERV1 -587 5744 5262 1710 148 15 0 chr17 58394188 58394459 -27044021 + THE1-int LTR MaLR 985 1259 -321 730 252 7 0 chr17 58394459 58394614 -27043866 - MER41-int LTR ERV1 -3542 2404 2249 1270 188 31 4 chr17 58394615 58394844 -27043636 + MER41D LTR ERV1 1 235 -322 2354 62 0 13 chr17 58394844 58395151 -27043329 + AluY SINE Alu 1 303 -8 1014 117 0 7 chr17 58395169 58395314 -27043166 + AluSq/x SINE Alu 5 148 -164 2518 104 118 20 chr17 58395314 58395754 -27042726 - LTR21A LTR ERV1 -22 483 1 356 234 32 0 chr17 58395771 58395865 -27042615 - MER52A LTR ERV1 -1373 382 286 * 2996 104 123 24 chr17 58395822 58396368 -27042112 + MER52C LTR ERV1 679 1278 0 2622 82 119 7 chr17 58396428 58396831 -27041649 - LTR7 LTR ERV1 -2 448 1 1035 193 49 41 chr17 58397242 58397485 -27040995 - MER41-int LTR ERV1 -5286 660 416 1802 149 22 9 chr17 58397506 58397993 -27040487 - LTR35 LTR ERV1 0 618 1 248 321 48 61 chr17 58398036 58398201 -27040279 - L2 LINE L2 -225 3088 2926 1116 246 82 55 chr17 58398255 58398329 -27040151 + MLT1E LTR MaLR 98 169 -424 2407 64 0 0 chr17 58398329 58398625 -27039855 + AluY SINE Alu 1 296 -15 1116 246 82 55 chr17 58398625 58399001 -27039479 + MLT1E LTR MaLR 169 560 -33 707 177 0 61 chr17 58399004 58399151 -27039329 - FLAM_C SINE Alu -4 139 2 2281 93 0 3 chr17 58399819 58400129 -27038351 + AluSc SINE Alu 1 309 0 2711 7 0 0 chr17 58400402 58400702 -27037778 + AluYa5 SINE Alu 1 300 -11 1448 194 0 14 chr17 58400730 58401056 -27037424 + AluSq SINE Alu 1 322 0 1333 147 57 77 chr17 58401278 58401428 -27037052 + AluJo SINE Alu 1 145 -167 1910 131 3 0 chr17 58401428 58401753 -27036727 + AluSx SINE Alu 1 326 0 1333 147 57 77 chr17 58401753 58401901 -27036579 + AluJo SINE Alu 145 294 -18 1262 179 173 5 chr17 58401970 58402446 -27036034 - MLT2F LTR ERVL -62 601 1 831 186 16 52 chr17 58402446 58402640 -27035840 - ERVL-F LTR ERVL -8 5756 5570 1231 178 50 12 chr17 58402704 58402963 -27035517 + AluJo SINE Alu 33 301 -11 3930 227 71 16 chr17 58402989 58403040 -27035440 - ERVL-F LTR ERVL -276 5488 5441 1700 123 0 81 chr17 58403040 58403349 -27035131 + AluJb SINE Alu 9 292 -20 3930 227 71 16 chr17 58403349 58404734 -27033746 - ERVL-F LTR ERVL -323 5441 3901 1433 209 27 14 chr17 58404734 58405026 -27033454 - AluJb SINE Alu -16 296 1 3930 227 71 16 chr17 58405026 58405376 -27033104 - ERVL-F LTR ERVL -1863 3901 3571 509 245 58 22 chr17 58405461 58405600 -27032880 - ERVL LTR ERVL -5109 655 512 465 290 123 22 chr17 58405607 58405876 -27032604 - MER68 LTR ERV1 -30 532 237 21 0 0 0 chr17 58405929 58405950 -27032530 + AT_rich Low_complexity Low_complexity 1 21 0 2132 86 0 10 chr17 58405950 58406251 -27032229 - AluY SINE Alu -13 298 1 1308 168 131 8 chr17 58406273 58406541 -27031939 + AluJo SINE Alu 1 301 -11 1782 126 18 7 chr17 58406614 58406900 -27031580 - AluJo SINE Alu -15 297 9 913 269 86 21 chr17 58406986 58407462 -27031018 + L1ME4a LINE L1 5613 6119 -2 212 247 195 0 chr17 58408350 58408427 -27030053 + MIR3 SINE MIR 117 208 0 270 290 129 40 chr17 58408516 58408640 -27029840 + L3b LINE CR1 1215 1349 -234 867 147 61 6 chr17 58408705 58408868 -27029612 + Tigger4(Zombi) DNA MER2_type 1 172 -2559 3725 118 9 14 chr17 58408871 58409438 -27029042 + Tigger4(Zombi) DNA MER2_type 2168 2731 0 483 188 94 34 chr17 58409593 58409710 -27028770 - FLAM_A SINE Alu -8 125 2 1945 105 0 83 chr17 58409714 58410038 -27028442 - AluSx SINE Alu -15 297 1 213 300 167 38 chr17 58410094 58410357 -27028123 + L2 LINE L2 1802 2098 -1216 199 289 147 20 chr17 58410460 58410657 -27027823 + L2 LINE L2 2521 2742 -572 1829 153 0 31 chr17 58411049 58411233 -27027247 - AluJb SINE Alu -1 311 140 1810 146 31 0 chr17 58411233 58411521 -27026959 - AluSx SINE Alu -15 297 1 1829 153 0 31 chr17 58411521 58411657 -27026823 - AluJb SINE Alu -172 140 1 249 219 228 53 chr17 58412001 58412015 -27026465 + MER5A DNA MER1_type 5 38 -151 442 233 233 0 chr17 58412015 58412144 -27026336 - MER5A DNA MER1_type -2 187 29 894 157 0 0 chr17 58413782 58413952 -27024528 - AluJb SINE Alu 0 305 136 2300 90 3 0 chr17 58413953 58414254 -27024226 - AluSp SINE Alu -11 302 1 353 181 106 62 chr17 58414812 58414972 -27023508 - L1MC5 LINE L1 -30 7931 7765 1389 207 45 7 chr17 58414982 58415272 -27023208 - AluJo SINE Alu -11 301 1 272 290 29 0 chr17 58415274 58415343 -27023137 + MIR SINE MIR 94 164 -98 2247 78 3 0 chr17 58415629 58415923 -27022557 - AluSc SINE Alu -14 295 1 419 57 0 0 chr17 58416072 58416125 -27022355 - MADE1 DNA Mariner 0 80 28 329 203 0 0 chr17 58416141 58416200 -27022280 + FAM SINE Alu 121 179 0 251 86 0 0 chr17 58416299 58416334 -27022146 + MADE1 DNA Mariner 46 80 0 1365 222 55 0 chr17 58416518 58416829 -27021651 + L1MB7 LINE L1 5852 6179 -5 2200 129 3 0 chr17 58417136 58417447 -27021033 + AluSx SINE Alu 1 312 0 2097 122 41 0 chr17 58417450 58417745 -27020735 + AluSx SINE Alu 1 307 -5 22 0 0 0 chr17 58418060 58418082 -27020398 + AT_rich Low_complexity Low_complexity 1 22 0 687 178 0 0 chr17 58419798 58419899 -27018581 - AluJ/FLAM SINE Alu -210 102 2 486 256 23 0 chr17 58420072 58420201 -27018279 - MER58B DNA MER1_type 0 341 210 2392 71 0 17 chr17 58420208 58420529 -27017951 + AluSq SINE Alu 1 313 0 807 197 53 5 chr17 58420602 58420790 -27017690 + MER3 DNA MER1_type 3 199 -10 223 355 108 11 chr17 58420829 58420922 -27017558 + L2 LINE L2 3203 3304 -9 1008 241 19 9 chr17 58421123 58421335 -27017145 + MIR SINE MIR 1 214 -48 514 206 135 35 chr17 58421806 58421976 -27016504 - L1ME2 LINE L1 -39 6125 5939 1036 132 169 11 chr17 58422003 58422192 -27016288 + MER20 DNA MER1_type 1 219 0 287 281 198 24 chr17 58422464 58422631 -27015849 + MIR SINE MIR 47 242 -20 841 161 7 7 chr17 58422884 58423021 -27015459 + AluJo SINE Alu 1 137 -175 1630 168 7 34 chr17 58423023 58423320 -27015160 + AluJb SINE Alu 5 293 -19 368 282 124 10 chr17 58423374 58423583 -27014897 + L1ME4a LINE L1 5877 6109 -12 22 35 0 0 chr17 58423584 58423613 -27014867 + AT_rich Low_complexity Low_complexity 1 29 0 727 142 0 9 chr17 58423885 58423998 -27014482 - FLAM_C SINE Alu -4 139 28 2191 105 25 0 chr17 58424001 58424287 -27014193 - AluSx SINE Alu -16 296 4 453 355 94 9 chr17 58424295 58424636 -27013844 - L1ME2 LINE L1 -1986 5822 5453 1798 161 3 13 chr17 58424737 58425042 -27013438 - AluJo SINE Alu -2 310 9 26 64 0 0 chr17 58425312 58425359 -27013121 + AT_rich Low_complexity Low_complexity 1 47 0 280 249 91 42 chr17 58425369 58425534 -27012946 - L1ME2 LINE L1 -1300 4846 4674 328 323 43 37 chr17 58426758 58426922 -27011558 - MIR3 SINE MIR -7 201 37 216 202 67 33 chr17 58427034 58427110 -27011370 - L2 LINE L2 -300 2974 2894 2552 71 0 0 chr17 58427110 58427419 -27011061 + AluY SINE Alu 1 309 -2 216 202 67 33 chr17 58427419 58427433 -27011047 - L2 LINE L2 -380 2894 2882 2310 112 0 0 chr17 58427438 58427734 -27010746 + AluSg SINE Alu 1 296 -14 1857 114 0 0 chr17 58430474 58430719 -27007761 - AluSx SINE Alu -4 308 64 198 236 28 56 chr17 58431692 58431764 -27006716 + MIR3 SINE MIR 10 79 -129 21 36 0 0 chr17 58431764 58431792 -27006688 + AT_rich Low_complexity Low_complexity 1 28 0 276 216 136 45 chr17 58431933 58432021 -27006459 - MIR SINE MIR -77 185 90 548 198 127 8 chr17 58433377 58433503 -27004977 + FLAM_C SINE Alu 2 142 -1 626 227 113 0 chr17 58433884 58434025 -27004455 - MER5A DNA MER1_type -32 157 1 229 276 195 0 chr17 58434240 58434327 -27004153 + MIR SINE MIR 88 191 -71 392 248 93 0 chr17 58434782 58434910 -27003570 + MIR SINE MIR 28 169 -39 231 161 0 0 chr17 58434954 58435010 -27003470 + (TGG)n Simple_repeat Simple_repeat 1 56 0 1937 156 44 22 chr17 58435473 58435838 -27002642 - THE1C LTR MaLR -2 373 1 772 208 7 0 chr17 58436058 58436212 -27002268 + MER20 DNA MER1_type 65 219 0 2310 120 0 3 chr17 58436311 58436620 -27001860 + AluSx SINE Alu 1 308 -4 2406 85 26 0 chr17 58436719 58437024 -27001456 - AluSq SINE Alu 0 313 1 181 91 30 30 chr17 58438936 58438969 -26999511 + MIR SINE MIR 117 149 -113 587 222 37 7 chr17 58439531 58439666 -26998814 - L1M4 LINE L1 -6385 157 19 249 274 204 30 chr17 58440045 58440246 -26998234 - MIR SINE MIR -15 247 12 1807 147 48 3 chr17 58440496 58440788 -26997692 + AluSx SINE Alu 1 305 -7 1254 168 140 3 chr17 58440865 58441150 -26997330 - MER33 DNA MER1_type 0 324 1 1771 158 10 23 chr17 58441424 58441727 -26996753 - AluJo SINE Alu -13 299 1 627 306 101 16 chr17 58441830 58442137 -26996343 + MLT1I LTR MaLR 42 374 -35 235 316 53 9 chr17 58442230 58442344 -26996136 + MIR3 SINE MIR 87 205 -3 207 250 0 0 chr17 58442615 58442655 -26995825 - L2 LINE L2 -23 3249 3210 1906 135 68 4 chr17 58443154 58443435 -26995045 + AluJb SINE Alu 1 299 -13 698 213 81 0 chr17 58443722 58443882 -26994598 + MER58B DNA MER1_type 169 341 0 2235 125 0 0 chr17 58443981 58444286 -26994194 - AluSx SINE Alu -7 305 1 222 200 271 0 chr17 58444481 58444551 -26993929 + MER5A DNA MER1_type 14 102 -87 267 173 173 0 chr17 58444621 58444673 -26993807 - MER5B DNA MER1_type -4 174 114 310 308 13 0 chr17 58444727 58444805 -26993675 - MER5B DNA MER1_type -45 133 55 1073 268 110 30 chr17 58444859 58445042 -26993438 - L1ME3 LINE L1 -32 6130 5963 2659 46 0 0 chr17 58445042 58445348 -26993132 + AluY SINE Alu 2 307 -4 1073 268 110 30 chr17 58445348 58445664 -26992816 - L1ME3 LINE L1 -199 5963 5591 1996 148 14 0 chr17 58445682 58445973 -26992507 - AluJb SINE Alu -13 299 5 229 297 14 27 chr17 58445973 58446041 -26992439 + MER5B DNA MER1_type 112 178 0 2291 118 3 0 chr17 58446046 58446351 -26992129 + AluSq SINE Alu 1 306 -7 418 225 0 0 chr17 58446778 58446867 -26991613 + MIR SINE MIR 165 253 -9 550 209 118 26 chr17 58446919 58447091 -26991389 + MER33 DNA MER1_type 4 159 -2465 1676 61 5 38 chr17 58447091 58447304 -26991176 - AluY SINE Alu -13 298 93 550 209 118 26 chr17 58447304 58447377 -26991103 + MER33 DNA MER1_type 159 359 -4 219 277 12 36 chr17 58447421 58447504 -26990976 + MER5A DNA MER1_type 1 81 -108 191 186 186 0 chr17 58447827 58447870 -26990610 + MIR SINE MIR 54 104 -104 351 178 346 0 chr17 58448165 58448266 -26990214 + MER5A DNA MER1_type 52 187 -2 495 212 0 0 chr17 58448342 58448601 -26989879 + G-rich Low_complexity Low_complexity 1 259 0 344 208 0 33 chr17 58448630 58448813 -26989667 + G-rich Low_complexity Low_complexity 2 178 0 466 201 9 9 chr17 58448824 58449057 -26989423 + G-rich Low_complexity Low_complexity 1 233 0 519 201 0 0 chr17 58449086 58449265 -26989215 + G-rich Low_complexity Low_complexity 2 180 0 426 208 0 0 chr17 58449326 58449485 -26988995 + G-rich Low_complexity Low_complexity 2 160 0 198 222 0 0 chr17 58449491 58449581 -26988899 + GA-rich Low_complexity Low_complexity 2 91 0 239 215 15 0 chr17 58450821 58450886 -26987594 + CT-rich Low_complexity Low_complexity 3 68 0 2335 110 7 0 chr17 58450894 58451203 -26987277 - AluSx SINE Alu -1 311 1 312 288 76 17 chr17 58451524 58451642 -26986838 + L2 LINE L2 3147 3271 -1 621 214 156 21 chr17 58452093 58452285 -26986195 + MIR SINE MIR 45 262 0 233 246 53 0 chr17 58453949 58454063 -26984417 + (TA)n Simple_repeat Simple_repeat 2 121 0 1248 217 48 62 chr17 58454150 58454220 -26984260 - L1ME1 LINE L1 0 6166 6097 2223 112 0 3 chr17 58454220 58454516 -26983964 - AluSx SINE Alu -17 295 1 1248 217 48 62 chr17 58454516 58454883 -26983597 - L1ME1 LINE L1 -69 6097 5735 1405 241 56 54 chr17 58455362 58455611 -26982869 + L2 LINE L2 2816 3063 -250 1619 120 120 12 chr17 58455611 58455870 -26982610 + AluJo SINE Alu 1 287 -25 1405 241 56 54 chr17 58455870 58456117 -26982363 + L2 LINE L2 3063 3313 0 982 172 34 60 chr17 58456538 58456782 -26981698 + L1MD3 LINE L1 7735 7973 -22 2248 112 0 10 chr17 58456782 58457086 -26981394 - AluSx SINE Alu -11 301 1 982 172 34 60 chr17 58457086 58457109 -26981371 + L1MD3 LINE L1 7973 7995 0 396 173 0 40 chr17 58457121 58457196 -26981284 + tRNA-Glu-GAG tRNA tRNA 1 72 -3 219 159 0 0 chr17 58457689 58457724 -26980756 - MIR SINE MIR -116 146 113 2409 109 0 3 chr17 58457724 58458036 -26980444 + AluSx SINE Alu 1 311 -1 207 276 229 0 chr17 58458361 58458466 -26980014 + MIR3 SINE MIR 46 174 -34 2161 141 0 3 chr17 58458484 58458797 -26979683 - AluSx SINE Alu 0 312 1 465 256 153 28 chr17 58459154 58459369 -26979111 + MIR SINE MIR 21 262 0 1769 177 0 21 chr17 58459414 58459738 -26978742 - AluJo SINE Alu 0 318 1 484 234 18 9 chr17 58459740 58459851 -26978629 - L2 LINE L2 0 3313 3202 378 237 43 11 chr17 58459856 58459949 -26978531 - MIR SINE MIR -112 150 55 595 266 27 32 chr17 58460944 58461098 -26977382 + MIR3 SINE MIR 15 169 -39 1911 142 36 20 chr17 58461098 58461400 -26977080 - AluJb SINE Alu -5 307 1 595 266 27 32 chr17 58461400 58461433 -26977047 + MIR3 SINE MIR 169 201 -7 779 274 62 8 chr17 58461688 58461929 -26976551 - MIR SINE MIR -6 256 3 214 180 40 20 chr17 58461929 58461978 -26976502 - MIR SINE MIR -117 145 96 524 258 140 31 chr17 58462474 58462703 -26975777 - MIR SINE MIR -2 260 7 264 153 71 71 chr17 58462706 58462791 -26975689 - MER45A DNA AcHobo 0 178 94 650 114 124 9 chr17 58462792 58462897 -26975583 + FLAM_C SINE Alu 2 118 -15 511 254 7 7 chr17 58462908 58462943 -26975537 - MER45A DNA AcHobo -1443 138 104 2484 89 0 0 chr17 58462943 58463245 -26975235 + AluSq SINE Alu 1 302 -11 511 254 7 7 chr17 58463245 58463347 -26975133 - MER45A DNA AcHobo -1476 105 1 1243 156 51 27 chr17 58463946 58464118 -26974362 + MER21A LTR ERV1 2 183 -748 2140 145 0 0 chr17 58464118 58464415 -26974065 - AluSx SINE Alu -15 297 1 1243 156 51 27 chr17 58464415 58464498 -26973982 + MER21A LTR ERV1 183 263 -668 2574 135 98 24 chr17 58464499 58464651 -26973829 + MER21A LTR ERV1 377 516 -415 2079 125 3 0 chr17 58464651 58464939 -26973541 - AluSx SINE Alu -23 289 1 2574 135 98 24 chr17 58464939 58465297 -26973183 + MER21A LTR ERV1 516 925 -6 1837 218 127 19 chr17 58465321 58465895 -26972585 - L1ME3 LINE L1 -2 6160 5525 251 269 58 39 chr17 58466467 58466571 -26971909 - MIR SINE MIR -126 136 31 1772 134 0 14 chr17 58467337 58467620 -26970860 - MER50 LTR ERV1 -23 711 433 1306 135 22 17 chr17 58467603 58467833 -26970647 - MER50 LTR ERV1 -494 240 10 * 899 148 0 0 chr17 58467921 58468049 -26970431 + FLAM_C SINE Alu 2 129 -4 2325 110 0 0 chr17 58468180 58468472 -26970008 + AluSx SINE Alu 1 292 -20 375 296 0 19 chr17 58468567 58468675 -26969805 - MIR SINE MIR -11 251 146 287 281 45 11 chr17 58468692 58468780 -26969700 + MER45 DNA AcHobo 6 96 -857 1888 124 44 78 chr17 58468780 58469166 -26969314 + THE1C LTR MaLR 1 373 -2 259 224 0 0 chr17 58469170 58469219 -26969261 + MER45 DNA AcHobo 1533 1581 0 416 267 75 0 chr17 58469219 58469339 -26969141 - MIR SINE MIR -112 150 22 716 179 0 0 chr17 58469393 58469510 -26968970 + FLAM_C SINE Alu 2 118 -25 368 355 140 11 chr17 58469533 58469655 -26968825 - L2 LINE L2 -22 3291 3186 609 160 292 0 chr17 58469655 58469799 -26968681 + MER5A DNA MER1_type 4 189 0 368 355 140 11 chr17 58469799 58470054 -26968426 - L2 LINE L2 -127 3186 2865 191 198 270 63 chr17 58470734 58470845 -26967635 + MIR SINE MIR 129 262 0 423 297 0 0 chr17 58471097 58471188 -26967292 - MER5A DNA MER1_type 0 189 99 412 280 10 0 chr17 58471188 58471280 -26967200 - MER5A DNA MER1_type 0 189 97 366 303 0 0 chr17 58471280 58471369 -26967111 - MER5A DNA MER1_type -2 187 99 1147 191 0 0 chr17 58471369 58471558 -26966922 - MER5A DNA MER1_type 0 189 1 589 221 143 0 chr17 58471572 58471726 -26966754 - MER5B DNA MER1_type -1 177 2 2428 97 7 0 chr17 58472689 58472999 -26965481 - AluSq SINE Alu -1 312 1 994 84 0 0 chr17 58473029 58473148 -26965332 - AluSp SINE Alu -194 119 1 303 238 12 12 chr17 58473167 58473247 -26965233 - Charlie8 DNA MER1_type -2217 200 121 1661 179 31 7 chr17 58473247 58473538 -26964942 - AluSx SINE Alu -14 298 1 1761 116 48 24 chr17 58473588 58473880 -26964600 + AluSq SINE Alu 1 299 -14 790 176 0 0 chr17 58473890 58474015 -26964465 + FLAM_C SINE Alu 1 125 -8 1810 84 6 128 chr17 58474037 58474389 -26964091 + AluY SINE Alu 2 314 0 934 179 0 0 chr17 58474389 58474534 -26963946 + AluJo/FRAM SINE Alu 138 282 -30 2268 110 0 7 chr17 58474538 58474837 -26963643 - AluSx SINE Alu -15 297 1 219 175 63 16 chr17 58474918 58474981 -26963499 - MIR3 SINE MIR -45 163 98 200 365 53 42 chr17 58475007 58475196 -26963284 - L2 LINE L2 -95 3177 2987 1876 136 67 28 chr17 58476009 58476370 -26962110 + THE1C LTR MaLR 1 375 0 1801 160 7 26 chr17 58476577 58476884 -26961596 + AluSx SINE Alu 1 301 -11 2210 70 56 0 chr17 58476888 58477174 -26961306 + AluY SINE Alu 5 306 -5 5044 162 23 21 chr17 58477176 58478028 -26960452 - L1MB7 LINE L1 -22 6162 5296 1756 197 0 0 chr17 58478028 58478333 -26960147 - AluJo SINE Alu -7 305 1 5044 162 23 21 chr17 58478333 58478898 -26959582 - L1MB7 LINE L1 -888 5296 4734 1086 210 55 15 chr17 58478944 58479216 -26959264 - L1MB7 LINE L1 -2001 4145 3863 841 258 87 35 chr17 58479284 58479594 -26958886 - MER21B LTR ERV1 -124 739 414 233 351 9 9 chr17 58480394 58480508 -26957972 - MIR SINE MIR -114 148 35 375 313 91 89 chr17 58481209 58481235 -26957245 - L2 LINE L2 0 3313 3289 2383 112 0 0 chr17 58481235 58481547 -26956933 + AluSx SINE Alu 1 312 0 375 313 91 89 chr17 58481547 58481949 -26956531 - L2 LINE L2 -24 3289 2881 2122 142 0 0 chr17 58481949 58482251 -26956229 + AluSx SINE Alu 1 302 -10 375 313 91 89 chr17 58482251 58482303 -26956177 - L2 LINE L2 -432 2881 2831 279 294 156 28 chr17 58482442 58482660 -26955820 + MLT1H LTR MaLR 115 360 -189 284 383 19 7 chr17 58482875 58483029 -26955451 + L3 LINE CR1 1269 1424 -153 385 270 97 51 chr17 58483069 58483265 -26955215 - MIR SINE MIR -21 241 37 1837 158 25 0 chr17 58484176 58484461 -26954019 - AluJo SINE Alu -9 303 12 1992 145 13 34 chr17 58484485 58484864 -26953616 - L1MB7 LINE L1 0 6184 5814 3953 183 42 68 chr17 58484866 58486004 -26952476 - L1MC1 LINE L1 -8 6325 5215 2676 126 88 42 chr17 58486098 58486119 -26952361 + L1MB3 LINE L1 5631 5650 -533 2398 113 102 8 chr17 58486119 58486510 -26951970 - MSTA LTR MaLR 0 428 1 2676 126 88 42 chr17 58486510 58486692 -26951788 + L1MB3 LINE L1 5650 5822 -361 1892 142 3 20 chr17 58486692 58486987 -26951493 + AluJb SINE Alu 1 290 -22 2676 126 88 42 chr17 58486987 58487263 -26951217 + L1MB3 LINE L1 5822 6084 -99 2110 120 3 3 chr17 58487263 58487564 -26950916 + AluSx SINE Alu 9 309 -3 1559 106 0 28 chr17 58487564 58487782 -26950698 + AluSg/x SINE Alu 85 296 -16 2676 126 88 42 chr17 58487782 58487822 -26950658 + L1MB3 LINE L1 6083 6177 -6 511 231 91 8 chr17 58488085 58488206 -26950274 + MIR SINE MIR 26 156 -106 270 306 21 62 chr17 58488261 58488405 -26950075 + MIR SINE MIR 17 154 -108 206 240 33 99 chr17 58489100 58489221 -26949259 + MIR SINE MIR 94 206 -56 498 193 141 42 chr17 58489488 58489565 -26948915 - HAL1 LINE L1 -110 2397 2329 2350 96 3 10 chr17 58489565 58489878 -26948602 - AluSx SINE Alu -1 311 1 498 193 141 42 chr17 58489878 58490013 -26948467 - HAL1 LINE L1 -178 2329 2164 788 238 65 140 chr17 58490595 58490873 -26947607 - HAL1 LINE L1 -770 1737 1531 1859 104 36 4 chr17 58490873 58491122 -26947358 + AluSx SINE Alu 1 257 -55 788 238 65 140 chr17 58491122 58491473 -26947007 - HAL1 LINE L1 -976 1531 1155 284 233 0 0 chr17 58492786 58492846 -26945634 - MIR SINE MIR 0 262 203 1035 142 0 13 chr17 58493012 58493167 -26945313 + FRAM SINE Alu 1 151 -25 594 241 37 37 chr17 58493190 58493381 -26945099 + MIR SINE MIR 47 237 -25 638 231 0 58 chr17 58493722 58493895 -26944585 + L1MC4a LINE L1 5688 5850 -1958 729 212 119 31 chr17 58493906 58494132 -26944348 - L1ME2 LINE L1 -9 6155 5910 510 203 74 3 chr17 58494185 58494313 -26944167 + MLT1B LTR MaLR 1 137 -253 229 154 19 58 chr17 58494322 58494374 -26944106 + MLT1C LTR MaLR 344 393 -74 * 304 100 0 0 chr17 58494369 58494409 -26944071 + MLT1A1 LTR MaLR 326 365 0 2794 191 47 95 chr17 58494410 58494601 -26943879 - L1ME2 LINE L1 -352 5812 5613 912 128 0 0 chr17 58494601 58494734 -26943746 + FLAM_C SINE Alu 1 133 0 2794 191 47 95 chr17 58494734 58494803 -26943677 - L1ME2 LINE L1 -551 5613 5542 2048 54 0 0 chr17 58494803 58495044 -26943436 + AluY SINE Alu 58 298 -13 2794 191 47 95 chr17 58495044 58495277 -26943203 - L1ME2 LINE L1 -622 5542 5299 2191 72 61 0 chr17 58495277 58495556 -26942924 - AluSp SINE Alu -17 296 1 2794 191 47 95 chr17 58495556 58495645 -26942835 - L1ME2 LINE L1 -865 5299 5207 1217 185 68 102 chr17 58495645 58495997 -26942483 - MER2 DNA MER2_type -4 340 1 2794 191 47 95 chr17 58495997 58496180 -26942300 - L1ME2 LINE L1 -957 5207 5017 2159 141 0 0 chr17 58496180 58496479 -26942001 + AluSx SINE Alu 2 300 -12 2794 191 47 95 chr17 58496479 58497215 -26941265 - L1ME2 LINE L1 -1147 5017 4372 652 97 43 0 chr17 58497215 58497308 -26941172 - AluJo SINE Alu -178 134 38 2437 241 39 71 chr17 58497308 58497530 -26940950 - L1ME2 LINE L1 -1757 4389 4161 486 0 0 0 chr17 58497530 58497584 -26940896 + (TA)n Simple_repeat Simple_repeat 1 54 0 2437 241 39 71 chr17 58497584 58497895 -26940585 - L1ME2 LINE L1 -1985 4161 3841 2149 144 0 3 chr17 58497895 58498208 -26940272 - AluJb SINE Alu 0 312 1 2437 241 39 71 chr17 58498208 58498323 -26940157 - L1ME2 LINE L1 -2305 3841 3724 1607 161 16 71 chr17 58498323 58498634 -26939846 - AluJo SINE Alu -18 294 1 2437 241 39 71 chr17 58498634 58498863 -26939617 - L1ME2 LINE L1 -2422 3724 3489 2288 94 3 3 chr17 58498863 58499160 -26939320 - AluY SINE Alu -14 297 1 2437 241 39 71 chr17 58499160 58499212 -26939268 - L1ME2 LINE L1 -2657 3489 3437 2258 122 0 0 chr17 58499212 58499523 -26938957 - AluSq SINE Alu -2 311 1 2437 241 39 71 chr17 58499523 58499643 -26938837 - L1ME2 LINE L1 -2709 3437 3370 2018 253 42 82 chr17 58499656 58500400 -26938080 + L1MEc LINE L1 50 763 -5633 2239 123 3 0 chr17 58500729 58501038 -26937442 - AluSx SINE Alu 0 312 3 25 0 0 0 chr17 58501519 58501544 -26936936 + AT_rich Low_complexity Low_complexity 1 25 0 1123 117 128 174 chr17 58501545 58501577 -26936903 - L1MB5 LINE L1 -10 6164 6132 540 0 0 0 chr17 58501577 58501637 -26936843 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 2262 85 0 0 chr17 58501637 58501920 -26936560 - AluY SINE Alu -28 283 1 1123 117 128 174 chr17 58501920 58502008 -26936472 - L1MB5 LINE L1 -41 6133 6042 1780 83 0 9 chr17 58502008 58502238 -26936242 - AluY SINE Alu -83 228 1 1123 117 128 174 chr17 58502238 58502483 -26935997 - L1MB5 LINE L1 -132 6042 5814 2219 120 0 0 chr17 58502512 58502804 -26935676 + AluSx SINE Alu 1 292 -20 951 116 53 84 chr17 58503000 58503190 -26935290 + AluJb SINE Alu 129 312 0 219 286 72 103 chr17 58503527 58503789 -26934691 + L2 LINE L2 3019 3272 0 600 260 72 49 chr17 58505179 58505383 -26933097 - MIR SINE MIR -19 243 32 2190 226 51 39 chr17 58505383 58505528 -26932952 + MLT1E LTR MaLR 2 144 -449 2406 63 3 3 chr17 58505528 58505853 -26932627 - AluY SINE Alu 0 325 1 2190 226 51 39 chr17 58505853 58506291 -26932189 + MLT1E LTR MaLR 144 593 0 600 260 72 49 chr17 58506291 58506309 -26932171 - MIR SINE MIR -230 32 16 2009 136 7 3 chr17 58506682 58506977 -26931503 - AluSx SINE Alu -16 296 1 752 103 0 9 chr17 58507703 58507810 -26930670 + AluJo SINE Alu 12 117 -195 22 35 0 0 chr17 58507812 58507841 -26930639 + AT_rich Low_complexity Low_complexity 1 29 0 1264 157 11 0 chr17 58507863 58508054 -26930426 + AluJo SINE Alu 101 293 -19 1707 137 4 15 chr17 58508412 58508682 -26929798 + AluSx SINE Alu 1 267 -45 253 291 66 40 chr17 58509316 58509467 -26929013 + MLT1J LTR MaLR 334 488 -23 906 296 33 10 chr17 58509551 58509852 -26928628 + MLT1I LTR MaLR 102 409 0 271 330 9 19 chr17 58509950 58510056 -26928424 - MIR SINE MIR -108 154 50 906 168 0 54 chr17 58510293 58510478 -26928002 + AluJo SINE Alu 115 289 -23 624 171 16 10 chr17 58510488 58510740 -26927740 + AluJ SINE Alu 1 311 -1 1881 146 45 0 chr17 58511956 58512244 -26926236 - AluJb SINE Alu -11 301 1 2073 118 3 3 chr17 58512430 58512718 -26925762 + AluSx SINE Alu 5 292 -20 1398 213 84 86 chr17 58512931 58513477 -26925003 - MLT1H LTR MaLR 0 549 5 2085 146 10 0 chr17 58514219 58514514 -26923966 + AluJb SINE Alu 1 298 -14 1178 245 26 79 chr17 58514537 58514953 -26923527 + MLT1L LTR MaLR 1 394 -221 304 228 79 20 chr17 58515170 58515271 -26923209 + MLT1L LTR MaLR 509 615 0 409 346 50 6 chr17 58515776 58515935 -26922545 + L2 LINE L2 3102 3267 -5 886 194 71 0 chr17 58517298 58517468 -26921012 - MER58A DNA MER1_type -6 218 37 440 171 67 57 chr17 58517918 58518023 -26920457 - ORSL DNA AcHobo 0 275 170 2252 100 10 3 chr17 58518085 58518386 -26920094 - AluSx SINE Alu -9 303 1 1527 154 15 117 chr17 58518411 58518598 -26919882 - AluJo SINE Alu -11 291 87 2071 132 3 7 chr17 58518598 58518894 -26919586 + AluSx SINE Alu 1 295 -17 1527 154 15 117 chr17 58518894 58518905 -26919575 - AluJo SINE Alu -214 88 2 709 177 0 65 chr17 58518905 58519029 -26919451 - FLAM_C SINE Alu -26 117 2 577 158 24 87 chr17 58519029 58519129 -26919351 - ORSL DNA AcHobo -156 119 27 930 180 21 21 chr17 58519129 58519318 -26919162 - MER53 DNA DNA 0 189 1 577 158 24 87 chr17 58519318 58519344 -26919136 - ORSL DNA AcHobo -248 27 1 625 217 5 79 chr17 58519398 58519587 -26918893 - LTR16A1 LTR ERVL -4 453 279 2315 102 0 0 chr17 58519623 58519916 -26918564 + AluSc SINE Alu 1 293 -16 384 252 135 68 chr17 58520550 58520772 -26917708 + L2 LINE L2 3032 3268 -4 198 0 0 0 chr17 58520774 58520796 -26917684 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 418 254 111 43 chr17 58521386 58521556 -26916924 + MIR SINE MIR 5 192 -64 2148 134 0 3 chr17 58522356 58522692 -26915788 - AluSx SINE Alu 0 335 1 344 315 9 0 chr17 58523158 58523266 -26915214 - L2 LINE L2 -7 3265 3157 263 368 119 16 chr17 58523369 58523562 -26914918 - L2 LINE L2 -558 2756 2544 3538 146 2 26 chr17 58523616 58524183 -26914297 - L1MB5 LINE L1 0 6174 5622 475 261 56 7 chr17 58524771 58524913 -26913567 + MIR SINE MIR 5 153 -109 4963 228 49 13 chr17 58525244 58526719 -26911761 + L1ME1 LINE L1 4065 5634 -532 2124 125 0 10 chr17 58526719 58527014 -26911466 - AluSx SINE Alu -20 292 1 4963 228 49 13 chr17 58527014 58527567 -26910913 + L1ME1 LINE L1 5634 6166 0 26 30 0 0 chr17 58529520 58529553 -26908927 + AT_rich Low_complexity Low_complexity 1 33 0 1846 168 0 10 chr17 58529553 58529844 -26908636 - AluJo SINE Alu -24 288 1 741 242 149 106 chr17 58529913 58530471 -26908009 - MLT1K LTR MaLR 0 588 7 438 239 112 56 chr17 58530478 58530545 -26907935 + MIR SINE MIR 55 117 -145 1726 178 20 3 chr17 58530545 58530837 -26907643 - AluJb SINE Alu -15 297 1 438 239 112 56 chr17 58530837 58530966 -26907514 + MIR SINE MIR 117 262 0 23 33 0 0 chr17 58530986 58531016 -26907464 + AT_rich Low_complexity Low_complexity 1 30 0 246 386 0 0 chr17 58531022 58531092 -26907388 + L2 LINE L2 3203 3272 0 21 0 0 0 chr17 58531161 58531182 -26907298 + AT_rich Low_complexity Low_complexity 1 21 0 311 207 37 0 chr17 58531304 58531386 -26907094 + L1MEc LINE L1 861 945 -5451 506 116 0 0 chr17 58531389 58531458 -26907022 - Tigger7 DNA MER2_type -8 2479 2411 * 7699 133 3 6 chr17 58531454 58532575 -26905905 - Tigger7 DNA MER2_type -1370 1117 1 319 132 0 0 chr17 58532660 58532713 -26905767 + Alu SINE Alu 248 300 -2 2685 176 63 58 chr17 58532776 58533222 -26905258 + L1MCa LINE L1 6 457 -5969 405 0 0 0 chr17 58533222 58533267 -26905213 + (TG)n Simple_repeat Simple_repeat 2 46 0 2685 176 63 58 chr17 58533267 58533427 -26905053 + L1MCa LINE L1 457 615 -5811 3121 149 15 98 chr17 58533427 58533633 -26904847 + L1MCa LINE L1 570 792 -5634 1847 175 3 3 chr17 58533633 58533936 -26904544 - AluJo SINE Alu -9 303 1 3121 149 15 98 chr17 58533936 58534028 -26904452 + L1MCa LINE L1 792 890 -5536 2042 146 0 0 chr17 58534028 58534322 -26904158 + AluSx SINE Alu 2 295 -17 3121 149 15 98 chr17 58534322 58534778 -26903702 + L1MCa LINE L1 890 1262 -5164 2708 131 85 20 chr17 58534776 58534944 -26903536 - L1MCa LINE L1 -4080 2346 2190 * 1895 144 32 0 chr17 58534944 58535229 -26903251 - AluSx SINE Alu -18 294 1 2708 131 85 20 chr17 58535229 58535603 -26902877 - L1MCa LINE L1 -4236 2190 1769 1802 151 11 91 chr17 58535613 58535977 -26902503 - MER2 DNA MER2_type -10 335 1 474 48 0 16 chr17 58536035 58536097 -26902383 + HY4 scRNA scRNA 2 62 -31 2975 196 29 36 chr17 58536100 58536789 -26901691 + L1MC1 LINE L1 4516 5199 -947 1664 185 10 23 chr17 58536789 58537092 -26901388 + AluJo SINE Alu 1 299 -13 4368 145 10 49 chr17 58537094 58537605 -26900875 + L1MC1 LINE L1 5305 5777 -556 1952 147 0 3 chr17 58537605 58537891 -26900589 - AluJb SINE Alu -27 285 1 4368 145 10 49 chr17 58537891 58538159 -26900321 + L1MC1 LINE L1 5777 6054 -279 723 129 0 15 chr17 58538161 58538344 -26900136 + MER46A DNA MER2_type 1 236 0 1529 148 7 67 chr17 58538344 58538641 -26899839 + L1MC1 LINE L1 6055 6333 0 1543 251 70 46 chr17 58538641 58539145 -26899335 + L1MCa LINE L1 1278 1803 -4804 306 0 0 0 chr17 58539145 58539179 -26899301 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 1543 251 70 46 chr17 58539179 58539348 -26899132 + L1MCa LINE L1 1803 1967 -4640 838 153 0 0 chr17 58539356 58539474 -26899006 + FLAM_C SINE Alu 1 118 -25 486 0 0 0 chr17 58539480 58539534 -26898946 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 1198 230 72 42 chr17 58539534 58539901 -26898579 + L1MCa LINE L1 1964 2349 -4258 2667 17 0 7 chr17 58539901 58540203 -26898277 + AluYb8 SINE Alu 1 300 -18 1198 230 72 42 chr17 58540203 58540291 -26898189 + L1MCa LINE L1 2349 2433 -4174 722 252 58 20 chr17 58540287 58540876 -26897604 - L1MEc LINE L1 -1621 4508 3798 * 1969 143 81 38 chr17 58540886 58541266 -26897214 - Tigger7 DNA MER2_type 0 2487 2125 2320 108 0 0 chr17 58541266 58541571 -26896909 + AluSx SINE Alu 1 305 -7 1969 143 81 38 chr17 58541571 58541697 -26896783 - Tigger7 DNA MER2_type -362 2125 2 2740 267 52 17 chr17 58541707 58541795 -26896685 - L1MEc LINE L1 -2362 3767 3683 1926 152 20 3 chr17 58541795 58542097 -26896383 - AluJb SINE Alu -5 307 1 2740 267 52 17 chr17 58542097 58542721 -26895759 - L1MEc LINE L1 -2446 3683 3001 2207 119 10 0 chr17 58542721 58543031 -26895449 - AluSp SINE Alu 0 313 1 2740 267 52 17 chr17 58543031 58543423 -26895057 - L1MEc LINE L1 -3128 3001 2624 1592 281 25 9 chr17 58543472 58543903 -26894577 + LTR16B LTR ERVL 5 442 -22 581 260 99 88 chr17 58543915 58544814 -26893666 - L1MEc LINE L1 -3497 2632 1772 550 252 98 55 chr17 58544904 58545079 -26893401 - L1MEc LINE L1 -4701 1609 1416 2616 43 7 0 chr17 58545079 58545379 -26893101 - AluY SINE Alu -9 302 1 550 252 98 55 chr17 58545379 58545477 -26893003 - L1MEc LINE L1 -4894 1416 1324 308 249 89 47 chr17 58545556 58545725 -26892755 - L1MEc LINE L1 -5196 923 748 506 272 38 6 chr17 58545844 58546002 -26892478 - L1MEc LINE L1 -5447 672 510 216 167 0 0 chr17 58546072 58546120 -26892360 + (CA)n Simple_repeat Simple_repeat 2 49 0 2529 75 0 3 chr17 58546194 58546501 -26891979 - AluSq SINE Alu -7 306 1 238 319 0 35 chr17 58546513 58546629 -26891851 - L1MEc LINE L1 -5734 385 274 736 252 50 14 chr17 58547028 58547246 -26891234 + MER20B DNA MER1_type 3 228 -555 2242 95 0 3 chr17 58547302 58547617 -26890863 - AluSp SINE Alu 0 314 1 1722 167 7 23 chr17 58547619 58547924 -26890556 - AluJo SINE Alu -12 300 1 634 217 123 30 chr17 58548181 58548399 -26890081 + MER20B DNA MER1_type 515 758 -25 2050 146 0 0 chr17 58548399 58548694 -26889786 + AluSx SINE Alu 1 295 -17 634 217 123 30 chr17 58548694 58548710 -26889770 + MER20B DNA MER1_type 758 771 -12 390 270 26 9 chr17 58548731 58548846 -26889634 - MIR SINE MIR -59 203 87 228 309 94 60 chr17 58548923 58549221 -26889259 - L2 LINE L2 0 3272 2965 256 314 21 16 chr17 58549457 58549585 -26888895 + L1ME4a LINE L1 5675 5806 -332 645 243 95 48 chr17 58549683 58549830 -26888650 + L1MC5 LINE L1 7508 7647 -314 2082 133 13 7 chr17 58549830 58550139 -26888341 + AluSx SINE Alu 1 311 -1 645 243 95 48 chr17 58550139 58550390 -26888090 + L1MC5 LINE L1 7647 7925 -36 398 261 56 21 chr17 58550420 58550562 -26887918 + L1ME4a LINE L1 5816 5962 -159 2413 126 126 8 chr17 58550679 58551061 -26887419 - MSTA LTR MaLR -1 427 1 217 330 23 34 chr17 58551078 58551166 -26887314 - MIR SINE MIR -156 106 20 1231 223 5 5 chr17 58551175 58551399 -26887081 - MER58A DNA MER1_type 0 224 1 250 194 90 15 chr17 58551849 58551916 -26886564 - MER91C DNA MER1_type -48 92 21 411 248 28 14 chr17 58551975 58552120 -26886360 - L1MC4a LINE L1 -1849 5959 5813 315 179 13 51 chr17 58552188 58552266 -26886214 - MIR SINE MIR -33 229 155 242 300 47 37 chr17 58552502 58552685 -26885795 - L1MC4a LINE L1 -1310 4836 4649 794 153 0 0 chr17 58552685 58552816 -26885664 - L1MB4 LINE L1 0 6180 6050 2219 109 3 3 chr17 58552829 58553131 -26885349 + AluSx SINE Alu 1 302 -10 297 176 0 0 chr17 58553156 58553207 -26885273 + U2 snRNA snRNA 1 51 -137 1800 160 21 64 chr17 58553207 58553581 -26884899 - L1MB3 LINE L1 -139 6044 5687 464 284 80 25 chr17 58554765 58554836 -26883644 - L2 LINE L2 0 3313 3247 2513 50 3 10 chr17 58554836 58555136 -26883344 + AluY SINE Alu 1 298 -13 464 284 80 25 chr17 58555136 58555303 -26883177 - L2 LINE L2 -66 3247 3062 609 292 115 91 chr17 58555500 58555756 -26882724 - L2 LINE L2 -1 3312 3064 3757 139 26 38 chr17 58555756 58556262 -26882218 + L1PB4 LINE L1 5501 5999 -157 2542 80 0 0 chr17 58556262 58556573 -26881907 + AluSq SINE Alu 1 311 -2 3757 139 26 38 chr17 58556573 58556726 -26881754 + L1PB4 LINE L1 5999 6152 -4 609 292 115 91 chr17 58556726 58556889 -26881591 - L2 LINE L2 -249 3064 2906 1608 170 63 0 chr17 58556889 58557159 -26881321 + AluJb SINE Alu 1 287 -25 609 292 115 91 chr17 58557159 58557397 -26881083 - L2 LINE L2 -407 2906 2631 218 103 0 26 chr17 58557730 58557769 -26880711 + (GAAA)n Simple_repeat Simple_repeat 2 39 0 230 313 15 0 chr17 58558281 58558348 -26880132 + L2 LINE L2 3229 3296 -17 310 363 73 40 chr17 58558746 58558870 -26879610 + L2 LINE L2 3123 3250 -22 844 301 26 23 chr17 58559071 58559413 -26879067 - L3 LINE CR1 -396 1181 839 2042 139 0 3 chr17 58561803 58562105 -26876375 + AluSx SINE Alu 6 306 -6 2132 128 3 0 chr17 58562212 58562508 -26875972 + AluSx SINE Alu 1 297 -15 2487 228 59 18 chr17 58563305 58563850 -26874630 - MLT1F1 LTR MaLR 0 567 1 206 338 60 46 chr17 58564078 58564229 -26874251 + MIR3 SINE MIR 20 172 -36 1942 128 24 3 chr17 58564400 58564690 -26873790 - AluSx SINE Alu -16 296 1 291 278 111 19 chr17 58564740 58564848 -26873632 + MER5B DNA MER1_type 4 121 -57 794 179 33 13 chr17 58564897 58565048 -26873432 + MER5B DNA MER1_type 10 163 -15 1149 268 73 38 chr17 58565224 58565675 -26872805 + L1MEd LINE L1 6 472 -5647 825 249 92 60 chr17 58565738 58565881 -26872599 + L1MEd LINE L1 694 831 -5288 2624 23 0 10 chr17 58565881 58566183 -26872297 + AluY SINE Alu 1 299 -12 825 249 92 60 chr17 58566183 58566473 -26872007 + L1MEd LINE L1 831 1141 -4978 473 271 83 18 chr17 58566521 58566791 -26871689 + L1MEd LINE L1 1275 1809 -4321 2152 110 14 0 chr17 58567139 58567431 -26871049 + AluSx SINE Alu 1 296 -16 441 58 0 0 chr17 58567432 58567484 -26870996 - Alu SINE Alu -257 53 2 908 244 77 48 chr17 58567493 58567805 -26870675 + L1ME3A LINE L1 5525 5845 -325 509 257 158 52 chr17 58568251 58568632 -26869848 + L1MEd LINE L1 2114 2534 -3595 866 328 68 20 chr17 58568642 58569076 -26869404 + L1MEd LINE L1 2436 2913 -3216 1880 156 7 23 chr17 58569076 58569377 -26869103 - AluJb SINE Alu -16 296 1 866 328 68 20 chr17 58569377 58569591 -26868889 + L1MEd LINE L1 2913 3115 -3014 1039 262 70 58 chr17 58569685 58570285 -26868195 + L1MEd LINE L1 3110 3716 -2413 299 180 0 49 chr17 58570337 58570398 -26868082 - L2 LINE L2 0 3313 3256 369 240 140 65 chr17 58570585 58570864 -26867616 - L2 LINE L2 -913 2401 2102 315 0 0 0 chr17 58570936 58570971 -26867509 + (TAA)n Simple_repeat Simple_repeat 2 36 0 666 206 33 31 chr17 58570992 58571174 -26867306 + L1ME1 LINE L1 6008 6161 -5 180 250 133 0 chr17 58571415 58571475 -26867005 + MIR3 SINE MIR 135 202 -6 187 182 30 0 chr17 58572242 58572275 -26866205 - MIR SINE MIR -6 256 223 * 202 243 0 0 chr17 58572248 58572285 -26866195 - L2 LINE L2 -19 3294 3258 269 118 20 0 chr17 58573327 58573378 -26865102 + GA-rich Low_complexity Low_complexity 1 52 0 391 261 133 66 chr17 58574495 58574721 -26863759 + L2 LINE L2 3032 3272 0 438 255 161 7 chr17 58575353 58575502 -26862978 + MIR SINE MIR 21 192 -70 1854 158 0 3 chr17 58576329 58576639 -26861841 - AluSx SINE Alu -2 310 2 355 315 9 0 chr17 58577106 58577214 -26861266 - L2 LINE L2 -7 3265 3157 3103 153 0 37 chr17 58577571 58578145 -26860335 - L1MB5 LINE L1 0 6174 5622 1526 136 0 0 chr17 58578703 58578923 -26859557 - AluSq SINE Alu -93 220 1 1784 156 3 3 chr17 58579030 58579331 -26859149 - AluSx SINE Alu -6 306 6 921 306 23 23 chr17 58581735 58582078 -26856402 + L3 LINE CR1 839 1181 -396 260 386 59 46 chr17 58582279 58582432 -26856048 - L2 LINE L2 -22 3250 3096 233 313 15 0 chr17 58582803 58582870 -26855610 - L2 LINE L2 -17 3296 3229 218 103 0 26 chr17 58583382 58583421 -26855059 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 558 314 101 95 chr17 58583798 58583995 -26854485 + L2 LINE L2 2666 2860 -453 1500 181 63 0 chr17 58583995 58584266 -26854214 - AluJb SINE Alu -24 288 1 558 314 101 95 chr17 58584266 58584429 -26854051 + L2 LINE L2 2860 3021 -292 3535 143 24 36 chr17 58584429 58584582 -26853898 - L1PB4 LINE L1 -4 6152 5999 2406 84 0 0 chr17 58584582 58584893 -26853587 - AluSq SINE Alu -2 311 1 3535 143 24 36 chr17 58584893 58585396 -26853084 - L1PB4 LINE L1 -157 5999 5504 558 314 101 95 chr17 58585396 58585655 -26852825 + L2 LINE L2 3021 3312 -1 484 287 66 33 chr17 58585852 58586019 -26852461 + L2 LINE L2 3062 3241 -72 2348 54 3 10 chr17 58586019 58586315 -26852165 - AluY SINE Alu -13 298 5 484 287 66 33 chr17 58586315 58586391 -26852089 + L2 LINE L2 3241 3313 0 1668 155 21 79 chr17 58587584 58587964 -26850516 + L1MB3 LINE L1 5687 6044 -139 292 176 0 0 chr17 58587964 58588015 -26850465 - U2 snRNA snRNA -137 51 1 2107 109 3 3 chr17 58588040 58588342 -26850138 - AluSx SINE Alu -10 302 1 751 153 0 0 chr17 58588355 58588486 -26849994 + L1MB4 LINE L1 6050 6180 0 235 300 47 37 chr17 58588486 58588669 -26849811 + L1MC4a LINE L1 4649 4836 -1310 303 177 13 63 chr17 58588907 58588986 -26849494 + MIR SINE MIR 155 229 -33 408 253 20 14 chr17 58589055 58589201 -26849279 + L1MC4a LINE L1 5813 5959 -1849 252 203 78 16 chr17 58589264 58589328 -26849152 - MER91C DNA MER1_type -24 116 49 1146 222 4 9 chr17 58589779 58590004 -26848476 + MER58A DNA MER1_type 1 224 0 222 330 23 34 chr17 58590013 58590101 -26848379 + MIR SINE MIR 20 106 -156 2259 125 125 10 chr17 58590118 58590501 -26847979 + MSTA LTR MaLR 1 427 -1 422 226 26 97 chr17 58590606 58590761 -26847719 - L1ME4a LINE L1 -162 5959 5816 277 213 43 43 chr17 58590791 58590885 -26847595 - L1MC5 LINE L1 -36 7925 7832 22 0 0 0 chr17 58591010 58591032 -26847448 + GC_rich Low_complexity Low_complexity 1 22 0 434 254 127 8 chr17 58593771 58593897 -26844583 + MIR3 SINE MIR 51 191 -17 216 158 0 0 chr17 58597710 58597748 -26840732 + CT-rich Low_complexity Low_complexity 3 40 0 331 267 11 11 chr17 58598469 58598559 -26839921 + MIR SINE MIR 103 192 -70 423 287 221 0 chr17 58598645 58598781 -26839699 + MIR SINE MIR 42 207 -55 198 0 0 0 chr17 58598838 58598860 -26839620 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 774 132 9 0 chr17 58598863 58598977 -26839503 - FLAM_C SINE Alu -18 115 1 611 227 266 0 chr17 58599040 58599247 -26839233 - MIR SINE MIR 0 262 1 442 257 70 34 chr17 58600619 58600821 -26837659 + MIR SINE MIR 54 262 0 2232 93 3 0 chr17 58600833 58601134 -26837346 - AluSx SINE Alu -10 302 1 208 173 135 0 chr17 58601192 58601244 -26837236 + L2 LINE L2 3186 3244 -69 282 326 38 8 chr17 58601267 58601399 -26837081 - MIR3 SINE MIR -52 156 21 481 296 77 18 chr17 58602642 58602811 -26835669 - L2 LINE L2 0 3313 3135 186 371 0 0 chr17 58602880 58602942 -26835538 - L2 LINE L2 -1 3271 3210 24 32 0 0 chr17 58603000 58603031 -26835449 + AT_rich Low_complexity Low_complexity 1 31 0 2217 75 0 0 chr17 58603034 58603345 -26835135 + AluSg1 SINE Alu 1 311 0 640 311 53 4 chr17 58604646 58604890 -26833590 - MIR SINE MIR 0 262 7 403 317 16 70 chr17 58605053 58605239 -26833241 + MIR SINE MIR 68 243 -19 207 0 0 0 chr17 58606232 58606255 -26832225 + (T)n Simple_repeat Simple_repeat 1 23 0 1006 233 49 5 chr17 58608767 58608990 -26829490 + MIR SINE MIR 7 239 -23 408 316 140 6 chr17 58609267 58609438 -26829042 + MIR SINE MIR 17 210 -52 2006 124 0 16 chr17 58611545 58611860 -26826620 - AluSx SINE Alu 0 312 3 213 333 15 0 chr17 58611997 58612063 -26826417 + MIR SINE MIR 86 152 -110 598 279 13 52 chr17 58612090 58612319 -26826161 + MIR SINE MIR 12 231 -31 1665 164 33 3 chr17 58612432 58612731 -26825749 + AluJo SINE Alu 1 308 -4 1130 74 6 18 chr17 58613186 58613349 -26825131 - L1PA10 LINE L1 0 6168 6008 183 295 154 31 chr17 58613674 58613901 -26824579 - L2 LINE L2 -41 3231 2977 181 224 282 0 chr17 58614006 58614091 -26824389 - L2 LINE L2 -2 3270 3162 1735 166 10 13 chr17 58614146 58614459 -26824021 - AluJo SINE Alu 0 312 1 241 378 42 33 chr17 58614639 58615068 -26823412 - L2 LINE L2 -447 2867 2435 308 210 94 36 chr17 58615199 58615337 -26823143 - Charlie7 DNA MER1_type -29 2583 2438 225 107 36 18 chr17 58620586 58620642 -26817838 + CT-rich Low_complexity Low_complexity 2 58 0 22 0 0 0 chr17 58621318 58621340 -26817140 + AT_rich Low_complexity Low_complexity 1 22 0 502 288 146 9 chr17 58622596 58622822 -26815658 + MIR SINE MIR 2 258 -4 858 160 55 131 chr17 58623316 58623553 -26814927 - MER20 DNA MER1_type 0 219 1 195 259 0 19 chr17 58623651 58623705 -26814775 - MIR3 SINE MIR -11 197 145 682 216 151 15 chr17 58624602 58624801 -26813679 + MIR SINE MIR 2 227 -35 1701 192 3 19 chr17 58624848 58625165 -26813315 - AluJo SINE Alu 0 312 1 313 95 0 0 chr17 58626394 58626436 -26812044 + 5S rRNA rRNA 1 42 -79 241 302 78 47 chr17 58626492 58626621 -26811859 - L2 LINE L2 0 3313 3181 232 265 98 61 chr17 58627088 58627220 -26811260 - MER5A DNA MER1_type -24 165 29 2628 70 3 0 chr17 58628148 58628460 -26810020 - AluSp SINE Alu 0 313 1 387 323 110 20 chr17 58629387 58629641 -26808839 - L2 LINE L2 -1 3271 2995 25 0 0 0 chr17 58630034 58630059 -26808421 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr17 58630544 58630578 -26807902 + (T)n Simple_repeat Simple_repeat 1 34 0 1190 157 25 29 chr17 58631157 58631424 -26807056 + L1MD3 LINE L1 7622 7978 -17 2297 81 0 3 chr17 58631431 58631716 -26806764 - AluSg1 SINE Alu -17 292 9 183 42 0 0 chr17 58631730 58631754 -26806726 + (T)n Simple_repeat Simple_repeat 1 24 0 14471 114 44 35 chr17 58631796 58632975 -26805505 - Tigger1 DNA MER2_type 0 2418 1251 1563 126 175 0 chr17 58632975 58633221 -26805259 + AluSg SINE Alu 1 289 -21 14471 114 44 35 chr17 58633221 58634438 -26804042 - Tigger1 DNA MER2_type -1167 1251 1 388 299 142 15 chr17 58634884 58635088 -26803392 - L1ME4a LINE L1 -5 6116 5887 2322 135 30 25 chr17 58635154 58635516 -26802964 - THE1B LTR MaLR 0 364 1 711 272 76 80 chr17 58636136 58636650 -26801830 - L1ME4a LINE L1 -285 5885 5374 1192 171 19 57 chr17 58636666 58636828 -26801652 - L1MA4 LINE L1 -11 6289 6139 689 201 0 15 chr17 58636828 58636962 -26801518 - FLAM_A SINE Alu -1 132 1 1192 171 19 57 chr17 58636962 58637063 -26801417 - L1MA4 LINE L1 -161 6139 6036 21 36 0 0 chr17 58638128 58638156 -26800324 + AT_rich Low_complexity Low_complexity 1 28 0 200 208 21 0 chr17 58638520 58638568 -26799912 + GA-rich Low_complexity Low_complexity 3 51 0 2145 127 0 3 chr17 58638628 58638927 -26799553 + AluSc SINE Alu 1 298 -11 2231 112 0 3 chr17 58639080 58639385 -26799095 - AluSx SINE Alu -8 304 1 399 317 25 8 chr17 58639593 58639713 -26798767 - L2 LINE L2 -12 3301 3180 293 221 211 0 chr17 58640291 58640386 -26798094 - MIR SINE MIR -62 200 86 376 218 168 10 chr17 58640637 58640738 -26797742 - L2 LINE L2 -4 3309 3193 451 148 0 34 chr17 58641360 58641498 -26796982 - AluSp/q SINE Alu 0 313 212 1776 182 20 54 chr17 58641807 58642086 -26796394 + MLT2C1 LTR ERVL 6 268 -129 1960 131 3 48 chr17 58642086 58642400 -26796080 - AluSx SINE Alu -12 300 1 1776 182 20 54 chr17 58642400 58642526 -26795954 + MLT2C1 LTR ERVL 268 397 0 411 323 39 0 chr17 58642555 58642685 -26795795 + L2 LINE L2 3137 3271 -1 297 234 357 13 chr17 58642723 58642877 -26795603 + MIR SINE MIR 31 237 -25 249 197 171 0 chr17 58642938 58643014 -26795466 + MIR SINE MIR 168 256 -6 2153 119 27 0 chr17 58644994 58645287 -26793193 - AluSx SINE Alu -11 301 1 184 278 0 19 chr17 58645362 58645416 -26793064 + MIR SINE MIR 108 160 -102 446 267 34 107 chr17 58645495 58645768 -26792712 + MIR SINE MIR 9 262 0 1276 189 15 30 chr17 58646227 58646492 -26791988 - AluJo SINE Alu -26 286 26 703 150 0 102 chr17 58646512 58646659 -26791821 - FLAM_C SINE Alu -1 132 1 2353 83 0 0 chr17 58647517 58647806 -26790674 - AluSc SINE Alu -20 289 1 207 341 159 40 chr17 58648378 58648594 -26789886 - L2 LINE L2 -17 3255 3066 1722 170 29 96 chr17 58648594 58649012 -26789468 - MLT1B LTR MaLR 0 390 1 207 341 159 40 chr17 58649012 58649197 -26789283 - L2 LINE L2 -206 3066 2806 2471 88 0 0 chr17 58649226 58649531 -26788949 - AluSc SINE Alu -4 305 1 193 206 29 73 chr17 58649531 58649592 -26788888 - MER5B DNA MER1_type -115 63 4 565 217 134 13 chr17 58649605 58649762 -26788718 - MER5B DNA MER1_type -2 176 1 297 294 11 22 chr17 58650882 58650974 -26787506 - MIR3 SINE MIR -6 202 112 1863 152 10 23 chr17 58650984 58651287 -26787193 - AluJb SINE Alu -13 299 1 986 145 0 0 chr17 58652162 58652314 -26786166 - AluJb SINE Alu -2 310 159 2329 104 0 0 chr17 58652528 58652825 -26785655 + AluSx SINE Alu 1 297 -15 215 269 0 0 chr17 58652837 58652889 -26785591 + (TGGG)n Simple_repeat Simple_repeat 3 54 0 369 339 57 8 chr17 58653918 58654042 -26784438 - MIR3 SINE MIR -44 164 35 297 163 62 12 chr17 58654052 58654132 -26784348 + HsTC2 DNA Tc2 1 84 -1814 1826 176 7 3 chr17 58654285 58654575 -26783905 - AluJb SINE Alu -21 291 1 2252 101 0 3 chr17 58656462 58656758 -26781722 - AluSx SINE Alu -17 295 1 260 316 0 0 chr17 58656765 58656841 -26781639 + L2 LINE L2 3192 3267 -46 759 186 16 0 chr17 58658688 58658817 -26779663 + AluJo SINE Alu 2 132 -180 2788 128 57 2 chr17 58659684 58660121 -26778359 + L1PB3 LINE L1 5694 6154 0 303 317 114 43 chr17 58660283 58660750 -26777730 + L2 LINE L2 2554 3060 -253 539 282 92 39 chr17 58660816 58661121 -26777359 + MER46C DNA MER2_type 8 328 -10 183 302 41 76 chr17 58661135 58661307 -26777173 + MIR SINE MIR 48 213 -49 * 849 298 13 0 chr17 58661278 58661506 -26776974 - MIR SINE MIR 0 262 32 928 188 18 12 chr17 58661791 58661956 -26776524 + AluJo SINE Alu 137 302 0 344 198 126 36 chr17 58661957 58662068 -26776412 - MIR3 SINE MIR -76 132 12 964 111 12 0 chr17 58662867 58663038 -26775442 + (TCCA)n Simple_repeat Simple_repeat 2 174 0 459 257 70 61 chr17 58663257 58663471 -26775009 - L1ME4a LINE L1 -290 5831 5616 609 92 82 20 chr17 58663644 58663742 -26774738 + AluSg/x SINE Alu 171 274 -36 228 35 0 0 chr17 58664583 58664612 -26773868 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2210 109 20 0 chr17 58664935 58665239 -26773241 - AluSx SINE Alu -2 310 1 190 164 279 0 chr17 58665481 58665542 -26772938 + MIR3 SINE MIR 83 160 -48 2388 84 0 19 chr17 58665563 58665874 -26772606 - AluSx SINE Alu -7 305 1 309 279 66 74 chr17 58666445 58666689 -26771791 - L1M4c LINE L1 -4201 2183 1942 2347 110 0 0 chr17 58666761 58667061 -26771419 - AluSx SINE Alu -12 300 1 2417 80 0 7 chr17 58667404 58667705 -26770775 + AluSc SINE Alu 1 299 -10 650 202 16 8 chr17 58667705 58667834 -26770646 + MIR SINE MIR 22 151 -111 299 248 40 50 chr17 58667934 58668035 -26770445 + MIR SINE MIR 163 262 0 2192 110 0 17 chr17 58668191 58668492 -26769988 - AluSx SINE Alu -16 296 1 24 0 0 0 chr17 58668512 58668536 -26769944 + AT_rich Low_complexity Low_complexity 1 24 0 185 301 84 12 chr17 58668662 58668745 -26769735 + MIR SINE MIR 44 132 -130 2374 109 0 0 chr17 58669260 58669572 -26768908 + AluSx SINE Alu 1 312 0 917 237 15 0 chr17 58670121 58670319 -26768161 + MER58A DNA MER1_type 24 224 0 1198 266 238 28 chr17 58670321 58671100 -26767380 - L2 LINE L2 -17 3296 2361 1086 236 45 20 chr17 58671518 58671840 -26766640 - MLT1F1 LTR MaLR 0 587 208 263 354 31 16 chr17 58671893 58672020 -26766460 - MIR SINE MIR -113 149 21 385 318 90 38 chr17 58672570 58672781 -26765699 - L1ME4a LINE L1 -123 5998 5777 2024 129 3 3 chr17 58672830 58673132 -26765348 - AluSx SINE Alu -4 308 7 527 115 23 11 chr17 58673139 58673226 -26765254 - AluSg/x SINE Alu -14 296 209 212 298 32 53 chr17 58674747 58674841 -26763639 + MIR SINE MIR 23 114 -148 * 442 303 186 9 chr17 58674823 58675044 -26763436 - MIR SINE MIR -1 261 2 224 362 43 0 chr17 58675092 58675186 -26763294 + MIR SINE MIR 104 201 -61 180 229 0 0 chr17 58675963 58675998 -26762482 + MER5A DNA MER1_type 32 66 -123 332 333 0 0 chr17 58676606 58676693 -26761787 + polypyrimidine Low_complexity Low_complexity 3 89 0 3967 237 97 51 chr17 58678079 58679577 -26758903 - L1MC4 LINE L1 0 8042 6312 1937 78 0 0 chr17 58679577 58679821 -26758659 + AluSg SINE Alu 47 290 -20 3967 237 97 51 chr17 58679821 58680280 -26758200 - L1MC4 LINE L1 -1730 6312 5875 1952 115 42 0 chr17 58680297 58680585 -26757895 + AluSx SINE Alu 1 300 -12 511 165 116 0 chr17 58680585 58680706 -26757774 - L1MC3 LINE L1 -170 7615 7481 455 261 20 13 chr17 58680825 58680978 -26757502 + MER113 DNA MER1_type? 30 183 -338 1731 174 13 0 chr17 58681357 58681655 -26756825 - AluJb SINE Alu -10 302 1 310 248 43 43 chr17 58682617 58682734 -26755746 - L2 LINE L2 -5 3267 3151 2429 181 17 2 chr17 58683116 58683536 -26754944 + MSTB LTR MaLR 1 426 0 195 114 0 0 chr17 58684029 58684064 -26754416 + (TG)n Simple_repeat Simple_repeat 1 35 0 270 0 0 0 chr17 58684974 58685004 -26753476 + (TG)n Simple_repeat Simple_repeat 2 31 0 850 207 39 24 chr17 58685567 58685775 -26752705 - LTR33 LTR ERVL -1 520 310 654 258 140 0 chr17 58685831 58686009 -26752471 - LTR33 LTR ERVL -318 203 1 1933 145 3 0 chr17 58686322 58686625 -26751855 + AluSx SINE Alu 1 304 -8 207 167 0 0 chr17 58686678 58686720 -26751760 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 329 293 86 17 chr17 58686817 58686933 -26751547 + L2 LINE L2 3190 3313 0 1703 187 15 36 chr17 58688602 58688993 -26749487 - MER58D DNA MER1_type -2 384 2 277 298 43 0 chr17 58689149 58689243 -26749237 - L2 LINE L2 -54 3259 3162 313 278 139 49 chr17 58689262 58689647 -26748833 - L2 LINE L2 -253 3060 2641 734 285 59 57 chr17 58689742 58690131 -26748349 - MLT1K LTR MaLR -3 585 196 283 259 36 62 chr17 58690440 58690552 -26747928 + MIR SINE MIR 20 128 -80 1784 112 0 8 chr17 58690654 58690921 -26747559 - AluSq SINE Alu -48 265 1 252 77 0 0 chr17 58692936 58692975 -26745505 + (TG)n Simple_repeat Simple_repeat 2 40 0 400 307 0 11 chr17 58693130 58693218 -26745262 + MER91A DNA MER1_type 109 195 -1 212 273 114 0 chr17 58693334 58693422 -26745058 - MIR3 SINE MIR -28 180 83 31 26 0 0 chr17 58694017 58694055 -26744425 + AT_rich Low_complexity Low_complexity 1 38 0 370 355 24 18 chr17 58694110 58694279 -26744201 + MIR SINE MIR 12 181 -81 2252 158 45 24 chr17 58695850 58696065 -26742415 - Tigger2a DNA MER2_type -2276 432 223 1652 170 3 22 chr17 58696065 58696376 -26742104 + AluSx SINE Alu 1 305 -7 2252 158 45 24 chr17 58696376 58696583 -26741897 - Tigger2a DNA MER2_type -2485 223 1 2319 190 28 0 chr17 58697634 58698060 -26740420 + L1MB3 LINE L1 5519 5956 -227 1874 135 0 3 chr17 58698202 58698556 -26739924 + AluSx SINE Alu 1 353 0 225 246 14 58 chr17 58699903 58699972 -26738508 - MIR3 SINE MIR -28 180 115 328 248 116 62 chr17 58700088 58700217 -26738263 - L2 LINE L2 0 3272 3137 198 283 19 0 chr17 58700592 58700645 -26737835 + L2 LINE L2 3201 3254 -18 1456 173 14 14 chr17 58700665 58700954 -26737526 - AluSx SINE Alu -22 290 2 248 271 0 14 chr17 58700959 58701029 -26737451 - MIR SINE MIR -107 155 87 937 221 77 0 chr17 58702781 58703003 -26735477 + Charlie1 DNA MER1_type 1 239 -2522 1791 143 3 19 chr17 58703010 58703318 -26735162 + AluSx SINE Alu 1 303 -9 556 158 67 8 chr17 58703319 58703439 -26735041 + Charlie1 DNA MER1_type 2633 2759 -2 341 360 0 0 chr17 58703553 58703667 -26734813 - L2 LINE L2 -218 3054 2941 205 286 0 43 chr17 58703763 58703833 -26734647 - MER5B DNA MER1_type -6 172 106 632 241 32 13 chr17 58704402 58704560 -26733920 - MIR SINE MIR -21 241 81 573 250 115 55 chr17 58706161 58706293 -26732187 - L1ME4a LINE L1 -77 6044 5921 189 0 0 0 chr17 58706293 58706314 -26732166 + (CA)n Simple_repeat Simple_repeat 2 22 0 573 250 115 55 chr17 58706314 58706617 -26731863 - L1ME4a LINE L1 -200 5921 5583 24 77 0 0 chr17 58706677 58706729 -26731751 + AT_rich Low_complexity Low_complexity 1 52 0 308 234 131 9 chr17 58707190 58707297 -26731183 - L1ME4a LINE L1 -35 6086 5967 1551 127 27 31 chr17 58707709 58707968 -26730512 + AluSx SINE Alu 1 258 -54 448 298 117 29 chr17 58707978 58708149 -26730331 - MIR3 SINE MIR -7 201 16 269 308 28 9 chr17 58708198 58708305 -26730175 - LTR67 LTR ERVL 0 557 449 2129 104 0 7 chr17 58709246 58709544 -26728936 + AluSx SINE Alu 10 305 -7 370 295 54 23 chr17 58711015 58711144 -26727336 - MIR3 SINE MIR -63 145 13 2302 61 7 0 chr17 58711665 58711960 -26726520 - AluY SINE Alu -14 297 1 2376 82 0 0 chr17 58712534 58712839 -26725641 + AluY SINE Alu 1 305 -6 1409 136 118 40 chr17 58712857 58712993 -26725487 - AluSx SINE Alu -19 293 169 2207 107 0 0 chr17 58712993 58713302 -26725178 - AluSg SINE Alu -1 309 1 1409 136 118 40 chr17 58713302 58713437 -26725043 - AluSx SINE Alu -143 169 1 198 143 0 0 chr17 58714202 58714237 -26724243 + (T)n Simple_repeat Simple_repeat 1 35 0 211 102 20 41 chr17 58714660 58714709 -26723771 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 1988 132 7 0 chr17 58715811 58716106 -26722374 - AluJb SINE Alu -15 297 1 587 168 174 37 chr17 58716332 58716493 -26721987 + MER3 DNA MER1_type 5 187 -22 184 310 103 0 chr17 58716687 58716745 -26721735 - L2 LINE L2 -63 3209 3146 587 297 117 43 chr17 58716880 58717325 -26721155 - L2 LINE L2 0 3313 2836 2194 106 0 13 chr17 58718115 58718427 -26720053 + AluSx SINE Alu 1 308 -4 205 344 0 33 chr17 58718746 58718836 -26719644 + L2 LINE L2 1915 2001 -1313 2244 234 64 2 chr17 58718850 58719350 -26719130 - MLT1G LTR MaLR 0 590 60 556 351 162 23 chr17 58719438 58720087 -26718393 + L2 LINE L2 2133 2871 -443 1444 130 9 4 chr17 58720188 58720419 -26718061 + AluSq SINE Alu 78 309 -4 278 257 54 0 chr17 58720526 58720600 -26717880 - MLT1H1 LTR MaLR 0 555 478 525 228 88 9 chr17 58721205 58721319 -26717161 - L2 LINE L2 -3 3310 3188 329 229 0 0 chr17 58721524 58721585 -26716895 + L2 LINE L2 3210 3270 -2 193 250 213 7 chr17 58722421 58722557 -26715923 - MIR SINE MIR -1 261 98 2105 145 10 0 chr17 58723391 58723695 -26714785 - AluSx SINE Alu -5 307 1 2306 117 0 3 chr17 58723708 58724016 -26714464 - AluSg SINE Alu 0 310 4 213 317 0 0 chr17 58724331 58724391 -26714089 + L2 LINE L2 3213 3272 0 191 262 0 0 chr17 58724462 58724504 -26713976 - L2 LINE L2 -8 3305 3264 * 197 269 258 0 chr17 58724470 58724563 -26713917 - MIR SINE MIR -10 252 136 1572 174 3 59 chr17 58724698 58725003 -26713477 + AluJo SINE Alu 1 288 -24 769 202 36 42 chr17 58725071 58725239 -26713241 + MER5B DNA MER1_type 12 178 0 3233 138 26 81 chr17 58727613 58727880 -26710600 - L1MB8 LINE L1 0 6178 5898 1479 169 0 0 chr17 58727880 58728116 -26710364 + MER46A DNA MER2_type 1 236 0 3233 138 26 81 chr17 58728116 58728411 -26710069 - L1MB8 LINE L1 -280 5898 5656 2199 110 11 0 chr17 58728411 58728724 -26709756 - AluSq SINE Alu 0 316 1 3233 138 26 81 chr17 58728724 58728840 -26709640 - L1MB8 LINE L1 -522 5656 5535 417 308 86 7 chr17 58728991 58729185 -26709295 + MIR SINE MIR 23 233 -29 1859 203 55 35 chr17 58729627 58730080 -26708400 - MLT1C LTR MaLR 0 467 6 308 336 9 0 chr17 58730184 58730297 -26708183 + (TGG)n Simple_repeat Simple_repeat 3 116 0 249 371 15 23 chr17 58730598 58730730 -26707750 + MIR3 SINE MIR 64 194 -14 324 19 37 19 chr17 58731124 58731178 -26707302 + (CA)n Simple_repeat Simple_repeat 2 56 0 316 277 71 18 chr17 58733383 58733495 -26704985 - MIR SINE MIR -12 250 133 249 281 96 30 chr17 58734461 58734596 -26703884 - MIR3 SINE MIR -3 205 62 234 193 0 0 chr17 58738005 58738062 -26700418 + CT-rich Low_complexity Low_complexity 4 60 0 279 0 0 0 chr17 58738676 58738707 -26699773 + (CA)n Simple_repeat Simple_repeat 1 31 0 258 298 65 88 chr17 58738790 58739052 -26699428 - MIR SINE MIR -5 257 2 254 343 79 26 chr17 58739106 58739342 -26699138 - MIR SINE MIR -16 246 1 1125 234 23 0 chr17 58739936 58740154 -26698326 - MER58A DNA MER1_type -1 223 1 181 365 12 0 chr17 58740631 58740716 -26697764 - MIR SINE MIR -119 143 58 2395 88 0 3 chr17 58744386 58744682 -26693798 + AluSg SINE Alu 4 298 -12 234 230 310 11 chr17 58744770 58744857 -26693623 + MER81 DNA DNA 1 113 -1 23 0 0 0 chr17 58745237 58745260 -26693220 + AT_rich Low_complexity Low_complexity 1 23 0 1876 144 0 11 chr17 58745636 58745955 -26692525 - AluJb SINE Alu 0 324 9 1807 120 0 0 chr17 58746055 58746288 -26692192 - AluSx SINE Alu -79 233 1 1004 213 14 14 chr17 58746508 58746729 -26691751 - MER58A DNA MER1_type -1 223 3 946 277 8 17 chr17 58746754 58746992 -26691488 + MIR SINE MIR 19 254 -8 345 330 55 0 chr17 58747870 58747979 -26690501 - L2 LINE L2 0 3272 3158 379 284 50 14 chr17 58748136 58748277 -26690203 + L2 LINE L2 3127 3272 0 2151 111 0 33 chr17 58748343 58748650 -26689830 - AluSq SINE Alu -16 297 1 371 277 144 26 chr17 58749372 58749567 -26688913 + MIR SINE MIR 30 247 -15 1288 167 47 5 chr17 58751964 58752179 -26686301 - MER58A DNA MER1_type 0 224 1 2351 81 0 36 chr17 58753312 58753619 -26684861 - AluSx SINE Alu -11 301 6 219 151 340 0 chr17 58753707 58753760 -26684720 - MIR3 SINE MIR -23 185 115 203 122 0 24 chr17 58755475 58755516 -26682964 + (TCC)n Simple_repeat Simple_repeat 2 41 0 1649 163 95 3 chr17 58755553 58755836 -26682644 + AluJo SINE Alu 3 311 -1 517 319 33 33 chr17 58756054 58756130 -26682350 - MIR SINE MIR 0 262 187 2264 115 0 0 chr17 58756130 58756425 -26682055 + AluSg SINE Alu 1 295 -15 517 319 33 33 chr17 58756425 58756589 -26681891 - MIR SINE MIR -74 188 22 284 290 15 61 chr17 58757314 58757445 -26681035 + MIR3 SINE MIR 71 195 -13 228 247 104 13 chr17 58758265 58758342 -26680138 + MIR SINE MIR 66 149 -113 249 262 98 8 chr17 58759282 58759295 -26679185 - HAL1b LINE L1 -23 1325 1313 543 279 72 65 chr17 58759295 58759819 -26678661 - L1ME4a LINE L1 -59 6062 1193 2317 118 0 3 chr17 58761065 58761378 -26677102 + AluSx SINE Alu 1 312 0 206 294 73 46 chr17 58761497 58761606 -26676874 + MIR SINE MIR 149 260 -2 218 299 164 73 chr17 58761628 58761902 -26676578 - L3 LINE CR1 -39 1538 1240 349 319 35 9 chr17 58762061 58762177 -26676303 - MER5B DNA MER1_type -1 177 59 1037 180 9 28 chr17 58762177 58762394 -26676086 - AluJo SINE Alu -15 297 85 709 218 0 0 chr17 58762395 58762519 -26675961 - FRAM SINE Alu -52 124 1 245 301 0 48 chr17 58762617 58762700 -26675780 - MIR3 SINE MIR -120 88 10 184 284 54 14 chr17 58762766 58762840 -26675640 - L3 LINE CR1 -358 1219 1143 227 260 27 27 chr17 58762862 58762935 -26675545 - L2 LINE L2 0 3272 3200 250 368 0 0 chr17 58763462 58763549 -26674931 + L3 LINE CR1 1473 1559 -18 25 31 0 0 chr17 58763680 58763712 -26674768 + AT_rich Low_complexity Low_complexity 1 32 0 425 313 152 14 chr17 58763807 58764024 -26674456 + MIR SINE MIR 10 256 -6 202 194 0 0 chr17 58766131 58766167 -26672313 - L3 LINE CR1 -3 1574 1539 1428 201 156 10 chr17 58767157 58767560 -26670920 + MLT1C LTR MaLR 6 467 0 27 0 0 0 chr17 58767827 58767854 -26670626 + AT_rich Low_complexity Low_complexity 1 27 0 3144 138 11 62 chr17 58767894 58768054 -26670426 - L1MA7 LINE L1 -2 6289 6122 2124 125 3 3 chr17 58768054 58768350 -26670130 - AluSx SINE Alu -16 296 1 3144 138 11 62 chr17 58768350 58768819 -26669661 - L1MA7 LINE L1 -169 6122 5692 604 274 68 100 chr17 58768821 58769481 -26668999 - L2 LINE L2 -11 3302 2651 183 227 23 0 chr17 58769858 58769902 -26668578 - MIR SINE MIR -112 150 106 629 255 113 26 chr17 58770076 58770307 -26668173 + MIR SINE MIR 1 251 -11 208 322 136 51 chr17 58770705 58770823 -26667657 - L3b LINE CR1 -1 1582 1455 1774 98 8 24 chr17 58772751 58772997 -26665483 - AluSq SINE Alu -16 297 56 1423 96 10 15 chr17 58773504 58773703 -26664777 - AluSg/x SINE Alu -7 305 108 486 0 0 0 chr17 58774364 58774418 -26664062 + (TG)n Simple_repeat Simple_repeat 2 55 0 244 306 61 31 chr17 58775691 58775789 -26662691 + MIR SINE MIR 162 262 0 2487 61 0 0 chr17 58775992 58776285 -26662195 - AluSc SINE Alu -16 293 1 193 275 99 38 chr17 58777500 58777631 -26660849 - MIR3 SINE MIR -55 153 15 444 241 93 0 chr17 58777651 58777829 -26660651 + MIR SINE MIR 51 250 -12 201 327 0 0 chr17 58778192 58778247 -26660233 - MIR SINE MIR -85 177 123 2308 91 10 3 chr17 58778253 58778551 -26659929 + AluSg SINE Alu 1 300 -10 526 287 156 46 chr17 58779863 58780319 -26658161 - L2 LINE L2 -1 3312 2807 200 318 139 16 chr17 58780687 58780816 -26657664 - L2 LINE L2 -256 3016 2872 1611 178 3 54 chr17 58781040 58781354 -26657126 - AluJo SINE Alu -14 298 1 466 292 36 26 chr17 58782763 58782955 -26655525 + MIR SINE MIR 69 262 0 2179 113 0 0 chr17 58783696 58784005 -26654475 + AluSc SINE Alu 1 309 0 603 0 0 0 chr17 58784206 58784273 -26654207 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2114 113 38 3 chr17 58784355 58784647 -26653833 + AluSx SINE Alu 7 308 -4 266 293 9 69 chr17 58786307 58786423 -26652057 - MIR3 SINE MIR -90 118 10 436 343 64 14 chr17 58786652 58786871 -26651609 - MIR SINE MIR -1 261 32 2125 144 17 0 chr17 58786953 58787251 -26651229 - AluSx SINE Alu -9 303 1 540 258 162 35 chr17 58787565 58787611 -26650869 - MIR SINE MIR -21 241 202 838 63 111 8 chr17 58787611 58787737 -26650743 - MER85 DNA T2_type 0 139 1 540 258 162 35 chr17 58787737 58787888 -26650592 - MIR SINE MIR -60 202 19 2174 105 3 3 chr17 58788377 58788673 -26649807 - AluSc SINE Alu -1 308 13 2175 81 42 14 chr17 58790278 58790562 -26647918 + AluSg1 SINE Alu 1 292 -17 225 224 71 35 chr17 58791085 58791170 -26647310 - MIR3 SINE MIR -23 185 98 284 250 86 17 chr17 58791320 58791436 -26647044 + MER103 DNA DNA 43 166 0 25 0 0 0 chr17 58791466 58791491 -26646989 + AT_rich Low_complexity Low_complexity 1 25 0 1492 221 51 0 chr17 58791563 58791682 -26646798 + AluJo SINE Alu 1 113 -201 228 35 0 0 chr17 58791682 58791711 -26646769 + (TAAAA)n Simple_repeat Simple_repeat 3 31 0 1492 221 51 0 chr17 58791711 58791891 -26646589 + AluJo SINE Alu 113 314 0 219 238 16 48 chr17 58791958 58792050 -26646430 + (TA)n Simple_repeat Simple_repeat 2 90 -33 2646 50 0 0 chr17 58792050 58792350 -26646130 - AluY SINE Alu -11 300 1 219 238 16 48 chr17 58792350 58792383 -26646097 + (TA)n Simple_repeat Simple_repeat 90 123 0 1939 159 0 23 chr17 58793659 58793797 -26644683 + AluJo SINE Alu 1 141 -171 2278 96 3 0 chr17 58793797 58794125 -26644355 + AluSq SINE Alu 1 329 0 1939 159 0 23 chr17 58794125 58794287 -26644193 + AluJo SINE Alu 141 295 -17 211 157 39 0 chr17 58794306 58794357 -26644123 + A-rich Low_complexity Low_complexity 3 55 0 212 83 0 28 chr17 58794421 58794457 -26644023 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 2207 87 11 7 chr17 58795484 58795771 -26642709 - AluSx SINE Alu -12 300 13 1960 175 3 0 chr17 58795876 58796213 -26642267 - MLT1C LTR MaLR 0 467 130 429 20 0 0 chr17 58797941 58797991 -26640489 + (TG)n Simple_repeat Simple_repeat 2 51 0 1947 148 0 4 chr17 58798252 58798530 -26639950 + AluJb SINE Alu 24 300 -12 837 134 0 22 chr17 58799248 58799382 -26639098 + FLAM_C SINE Alu 1 131 -2 438 260 18 4 chr17 58801389 58801676 -26636804 + (TGGA)n Simple_repeat Simple_repeat 1 291 0 630 213 99 91 chr17 58802112 58802313 -26636167 + MIR SINE MIR 8 213 -49 2385 71 24 7 chr17 58802313 58802610 -26635870 + AluY SINE Alu 1 302 -9 630 213 99 91 chr17 58802610 58802661 -26635819 + MIR SINE MIR 213 262 0 478 276 72 72 chr17 58804039 58804329 -26634151 + L2 LINE L2 2950 3239 -33 2299 122 0 0 chr17 58804343 58804646 -26633834 - AluSx SINE Alu -9 303 1 757 198 161 5 chr17 58804825 58805017 -26633463 + MIR SINE MIR 4 225 -37 1500 132 44 0 chr17 58805347 58805574 -26632906 - AluSg/x SINE Alu 0 312 76 206 275 0 0 chr17 58805932 58805972 -26632508 + G-rich Low_complexity Low_complexity 3 42 0 491 253 19 25 chr17 58806523 58806681 -26631799 + MER45A DNA AcHobo 1 157 -21 1188 67 67 0 chr17 58807417 58807567 -26630913 - AluSq SINE Alu -78 235 76 242 284 10 122 chr17 58807567 58807764 -26630716 - MIR SINE MIR -15 247 73 282 116 0 0 chr17 58807926 58807969 -26630511 + (GGGGA)n Simple_repeat Simple_repeat 3 45 0 538 332 31 18 chr17 58808603 58808832 -26629648 + MIR SINE MIR 31 262 0 2334 98 13 0 chr17 58808945 58809251 -26629229 - AluSq SINE Alu -3 310 1 382 276 100 29 chr17 58810284 58810454 -26628026 - MIR SINE MIR -47 215 34 1287 157 9 0 chr17 58810457 58810673 -26627807 - MER20 DNA MER1_type 0 219 2 2092 128 7 10 chr17 58810772 58811077 -26627403 - AluSx SINE Alu -2 310 7 628 230 24 70 chr17 58812528 58812741 -26625739 - MLT1J2 LTR MaLR 0 450 248 400 316 37 46 chr17 58812753 58812947 -26625533 - MIR SINE MIR -39 223 30 504 0 0 0 chr17 58813207 58813263 -26625217 + (TG)n Simple_repeat Simple_repeat 2 57 0 311 299 134 8 chr17 58814965 58815099 -26623381 - L2 LINE L2 0 3313 3163 263 308 15 54 chr17 58815211 58815341 -26623139 - L2 LINE L2 -3153 161 37 183 314 168 29 chr17 58815828 58815965 -26622515 - MIR SINE MIR -19 243 88 1820 140 57 4 chr17 58816045 58816324 -26622156 - AluSx SINE Alu -18 294 1 323 333 105 0 chr17 58818609 58818762 -26619718 + MIR3 SINE MIR 36 204 -4 380 113 16 0 chr17 58819268 58819330 -26619150 + MER41B LTR ERV1 480 542 -93 1326 201 152 34 chr17 58819332 58819444 -26619036 - LTR50 LTR ERVL -21 774 677 455 211 272 7 chr17 58819444 58819591 -26618889 - MER5A DNA MER1_type -3 186 1 1326 201 152 34 chr17 58819591 58820071 -26618409 - LTR50 LTR ERVL -118 677 24 402 200 191 0 chr17 58820075 58820180 -26618300 - MIR SINE MIR -122 140 16 224 297 55 73 chr17 58820861 58821026 -26617454 + L2 LINE L2 2950 3111 -161 263 237 124 21 chr17 58821630 58821727 -26616753 + MER103 DNA DNA 5 111 -55 264 338 166 14 chr17 58823548 58823844 -26614636 + L2 LINE L2 2630 2970 -344 194 264 0 0 chr17 58824047 58824100 -26614380 + L2 LINE L2 3207 3259 -13 2377 91 0 3 chr17 58824599 58824896 -26613584 + AluSq SINE Alu 1 296 -17 475 282 35 35 chr17 58825126 58825300 -26613180 + MIR3 SINE MIR 32 205 -3 343 304 111 7 chr17 58826147 58826282 -26612198 + MIR SINE MIR 93 241 -21 2130 114 45 0 chr17 58828666 58828955 -26609525 - AluSq SINE Alu -11 302 1 276 290 50 5 chr17 58829183 58829294 -26609186 + MIR SINE MIR 1 111 -97 541 267 92 5 chr17 58829460 58829802 -26608678 + LTR16A LTR ERVL 23 450 0 204 375 0 0 chr17 58829896 58829976 -26608504 - MIR3 SINE MIR -35 173 94 485 215 9 9 chr17 58832072 58832179 -26606301 - MIR SINE MIR -72 190 84 197 245 39 88 chr17 58833537 58833639 -26604841 + L3 LINE CR1 585 681 -896 592 310 83 45 chr17 58833819 58833958 -26604522 - L1ME4a LINE L1 -5 6116 5984 2052 143 3 3 chr17 58833958 58834252 -26604228 - AluJb SINE Alu -18 294 1 592 310 83 45 chr17 58834252 58834486 -26603994 - L1ME4a LINE L1 -137 5984 5729 2484 91 40 0 chr17 58834515 58834890 -26603590 + MLT1B LTR MaLR 1 390 0 207 125 0 0 chr17 58836954 58836994 -26601486 + (TC)n Simple_repeat Simple_repeat 2 41 0 477 0 0 0 chr17 58836996 58837049 -26601431 + (CA)n Simple_repeat Simple_repeat 1 53 0 2366 109 7 0 chr17 58837157 58837461 -26601019 - AluSg SINE Alu -4 306 1 1825 169 0 14 chr17 58837818 58838108 -26600372 + AluJo SINE Alu 1 286 -26 581 193 121 48 chr17 58838330 58838496 -26599984 - MER5A DNA MER1_type 0 189 12 1003 235 109 23 chr17 58839063 58839478 -26599002 + MLT1H LTR MaLR 53 533 -16 253 173 0 0 chr17 58839728 58839780 -26598700 + L1PA7 LINE L1 6103 6154 0 386 248 23 31 chr17 58840399 58840528 -26597952 + HsTC2c DNA Tc2 601 728 -1 1404 159 5 9 chr17 58840666 58840886 -26597594 - AluJb SINE Alu -9 303 85 1235 341 133 26 chr17 58841051 58841473 -26597007 - L1P LINE L1 -783 5363 4897 481 152 0 0 chr17 58841573 58841652 -26596828 - MER45A DNA AcHobo 0 178 100 1243 108 0 18 chr17 58841652 58841819 -26596661 + AluSg/x SINE Alu 132 295 -15 260 236 18 0 chr17 58841819 58841874 -26596606 - MER45A DNA AcHobo -76 102 47 829 202 30 20 chr17 58842487 58842690 -26595790 - MER2 DNA MER2_type -135 210 6 188 386 14 0 chr17 58843255 58843325 -26595155 - L2 LINE L2 -210 3062 2992 184 261 26 70 chr17 58844058 58844173 -26594307 - MIR SINE MIR -41 221 112 221 217 116 108 chr17 58845308 58845437 -26593043 - MIR SINE MIR -2 260 131 324 189 189 11 chr17 58845439 58845529 -26592951 - L2 LINE L2 0 3313 3208 312 278 34 49 chr17 58845749 58845899 -26592581 + MIR SINE MIR 8 154 -71 204 233 0 111 chr17 58847329 58847419 -26591061 - MIR SINE MIR -88 174 95 279 214 10 92 chr17 58847534 58847632 -26590848 - MIR SINE MIR -74 188 99 482 278 40 23 chr17 58848062 58848235 -26590245 - MIR SINE MIR -18 244 69 402 280 40 16 chr17 58848247 58848372 -26590108 - L2 LINE L2 -6 3266 3139 1261 216 71 15 chr17 58848887 58849211 -26589269 - MLT1A1 LTR MaLR 0 365 24 339 295 50 7 chr17 58849308 58849447 -26589033 - MIR3 SINE MIR -49 159 15 955 193 137 4 chr17 58850595 58850828 -26587652 - MER58B DNA MER1_type -2 339 76 925 180 73 44 chr17 58850828 58851034 -26587446 + AluJo SINE Alu 1 212 -100 217 277 46 0 chr17 58851362 58851427 -26587053 - L3 LINE CR1 -12 1565 1498 1312 202 186 54 chr17 58852087 58852533 -26585947 + MLT1D LTR MaLR 1 505 0 1093 138 138 77 chr17 58853565 58853612 -26584868 - L1MB4 LINE L1 -2 6178 6135 2288 83 31 0 chr17 58853612 58853900 -26584580 - AluSx SINE Alu -15 297 1 1093 138 138 77 chr17 58853900 58854046 -26584434 - L1MB4 LINE L1 -45 6135 5999 1963 153 0 23 chr17 58854046 58854353 -26584127 - AluJb SINE Alu -7 305 6 1093 138 138 77 chr17 58854353 58854469 -26584011 - L1MB4 LINE L1 -181 5999 5849 2415 97 0 0 chr17 58856295 58856593 -26581887 - AluSx SINE Alu -14 298 1 222 322 34 34 chr17 58857443 58857561 -26580919 + MIR SINE MIR 135 252 -10 213 322 58 33 chr17 58857706 58857827 -26580653 + L3b LINE CR1 1293 1416 -167 202 316 0 0 chr17 58857997 58858054 -26580426 - MIR SINE MIR -115 93 37 209 224 0 0 chr17 58858062 58858111 -26580369 + L2 LINE L2 3264 3312 -1 608 304 92 29 chr17 58858424 58858664 -26579816 - MIR SINE MIR -2 260 6 331 308 81 24 chr17 58859413 58859624 -26578856 - MIR SINE MIR -38 224 2 1419 113 45 9 chr17 58859733 58859955 -26578525 - MER30 DNA MER1_type 0 230 1 233 29 0 29 chr17 58859964 58859999 -26578481 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1928 141 3 11 chr17 58860001 58860285 -26578195 - AluSx SINE Alu -30 282 1 566 233 157 0 chr17 58860413 58860572 -26577908 + MER5A DNA MER1_type 4 187 -2 218 336 64 8 chr17 58860984 58861109 -26577371 + MIR SINE MIR 21 152 -56 831 218 18 0 chr17 58861275 58861440 -26577040 - MER58A DNA MER1_type 0 168 1 427 287 90 6 chr17 58861746 58861913 -26576567 + MIR SINE MIR 65 245 -17 775 150 0 8 chr17 58864127 58864260 -26574220 - FLAM_C SINE Alu -1 132 1 482 233 9 9 chr17 58864730 58864846 -26573634 - MIR3 SINE MIR -52 156 41 514 290 104 14 chr17 58869691 58869912 -26568568 - MIR SINE MIR -1 261 21 207 325 159 8 chr17 58870706 58870832 -26567648 + L2 LINE L2 3118 3262 -10 203 328 16 0 chr17 58872053 58872114 -26566366 - MIR SINE MIR -58 150 89 2299 92 3 7 chr17 58873856 58874160 -26564320 + AluSq SINE Alu 1 303 -10 1411 72 0 0 chr17 58875286 58875452 -26563028 - AluSx SINE Alu -146 166 1 484 274 32 32 chr17 58875702 58875859 -26562621 + MIR SINE MIR 8 164 -98 240 170 13 51 chr17 58876991 58877082 -26561398 - MIR SINE MIR -15 193 108 645 237 137 38 chr17 58877111 58877322 -26561158 + MIR SINE MIR 31 262 0 323 213 21 0 chr17 58877323 58877417 -26561063 + (TCCA)n Simple_repeat Simple_repeat 1 96 0 2440 98 0 0 chr17 58878012 58878318 -26560162 + AluSx SINE Alu 1 306 -6 592 235 8 0 chr17 58878324 58878456 -26560024 - L1PB4 LINE L1 -13 6143 6011 194 315 217 0 chr17 58878585 58878728 -26559752 - MIR SINE MIR -60 202 29 243 79 0 0 chr17 58878876 58878914 -26559566 + (TCTG)n Simple_repeat Simple_repeat 2 39 0 408 71 0 0 chr17 58878924 58878980 -26559500 + (CA)n Simple_repeat Simple_repeat 1 56 0 511 266 177 21 chr17 58880151 58880343 -26558137 - MIR SINE MIR -2 260 39 458 315 109 31 chr17 58880510 58880923 -26557557 + L2 LINE L2 2828 3272 0 398 323 123 13 chr17 58883107 58883262 -26555218 - MIR SINE MIR -71 191 20 376 261 67 8 chr17 58885277 58885411 -26553069 + L1ME4a LINE L1 5773 5914 -207 773 234 0 7 chr17 58885422 58885576 -26552904 + MER5B DNA MER1_type 26 178 0 2563 75 0 0 chr17 58886438 58886744 -26551736 + AluSx SINE Alu 1 306 -6 2278 106 3 0 chr17 58888171 58888464 -26550016 - AluSq SINE Alu -19 294 1 370 298 37 64 chr17 58888803 58888991 -26549489 + MER5A DNA MER1_type 7 189 0 180 309 98 24 chr17 58889167 58889290 -26549190 - MIR3 SINE MIR -21 187 56 1771 50 0 9 chr17 58889953 58890172 -26548308 - L1PA5 LINE L1 0 6154 5938 2343 110 0 0 chr17 58890281 58890581 -26547899 + AluSx SINE Alu 1 300 -12 842 207 168 105 chr17 58890755 58891315 -26547165 - MLT1G1 LTR MaLR 0 595 1 369 236 39 9 chr17 58891344 58891458 -26547022 - MIR SINE MIR -65 143 40 1589 161 70 35 chr17 58891878 58892164 -26546316 + AluJo SINE Alu 1 296 -16 665 349 16 12 chr17 58893479 58893734 -26544746 + MIR SINE MIR 7 262 0 315 0 0 0 chr17 58893788 58893823 -26544657 + (TA)n Simple_repeat Simple_repeat 2 36 0 318 217 217 51 chr17 58894488 58894663 -26543817 + L1ME4a LINE L1 5897 6100 -21 1974 99 40 4 chr17 58894925 58895220 -26543260 - AluSg SINE Alu 0 305 1 2309 95 3 3 chr17 58895834 58896140 -26542340 + AluSp SINE Alu 1 306 -7 495 0 0 0 chr17 58898548 58898603 -26539877 + (TG)n Simple_repeat Simple_repeat 2 56 0 726 268 102 19 chr17 58898656 58898970 -26539510 - MARNA DNA Mariner -74 512 173 718 168 7 51 chr17 58899130 58899267 -26539213 - FLAM_C SINE Alu -1 132 2 222 280 97 11 chr17 58900371 58900464 -26538016 + MIR SINE MIR 116 216 -46 2439 92 0 0 chr17 58900739 58901043 -26537437 - AluSq SINE Alu -9 304 1 204 67 0 0 chr17 58901719 58901749 -26536731 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 2449 81 0 0 chr17 58901753 58902049 -26536431 - AluSq SINE Alu -17 296 1 815 272 60 16 chr17 58904220 58904283 -26534197 - MIR SINE MIR 0 262 203 2339 119 0 0 chr17 58904283 58904595 -26533885 - AluSx SINE Alu 0 312 1 815 272 60 16 chr17 58904595 58904781 -26533699 - MIR SINE MIR -59 203 2 198 0 0 0 chr17 58905972 58905994 -26532486 + (T)n Simple_repeat Simple_repeat 1 22 0 2086 110 3 7 chr17 58906524 58906826 -26531654 - AluSx SINE Alu 0 301 1 1285 231 165 32 chr17 58907214 58907746 -26530734 - L1MD2 LINE L1 0 6359 5757 193 250 25 0 chr17 58907898 58907938 -26530542 - L2 LINE L2 -6 3307 3267 243 209 151 58 chr17 58908065 58908151 -26530329 - MIR SINE MIR -122 140 47 213 308 39 13 chr17 58908225 58908303 -26530177 + MIR3 SINE MIR 122 201 -7 376 195 58 11 chr17 58908857 58908944 -26529536 + L3 LINE CR1 1484 1574 -3 183 325 83 42 chr17 58910772 58910892 -26527588 + MIR SINE MIR 24 148 -60 443 217 24 38 chr17 58911097 58911223 -26527257 + MIR SINE MIR 19 145 -63 774 150 0 15 chr17 58911231 58911364 -26527116 + FLAM_A SINE Alu 1 131 -2 23 0 0 0 chr17 58911364 58911387 -26527093 + AT_rich Low_complexity Low_complexity 1 23 0 489 115 0 11 chr17 58911870 58911957 -26526523 + L1MB3 LINE L1 6096 6181 -2 2082 118 7 36 chr17 58911980 58912286 -26526194 - AluSx SINE Alu -15 297 1 450 162 54 9 chr17 58913030 58913141 -26525339 - MER5B DNA MER1_type 0 178 63 397 261 154 0 chr17 58913964 58914094 -26524386 - MIR3 SINE MIR -34 174 25 2315 98 3 3 chr17 58914371 58914668 -26523812 - AluSx SINE Alu -15 297 1 432 0 0 0 chr17 58916049 58916097 -26522383 + (TG)n Simple_repeat Simple_repeat 2 49 0 1007 285 139 27 chr17 58916102 58917002 -26521478 + L2 LINE L2 2279 3288 -25 198 157 29 14 chr17 58919700 58919770 -26518710 + (CA)n Simple_repeat Simple_repeat 2 72 0 181 364 71 20 chr17 58921116 58921166 -26517314 - L3 LINE CR1 -7 1570 1524 708 243 30 18 chr17 58921166 58921335 -26517145 - MER5B DNA MER1_type -4 174 4 181 364 71 20 chr17 58921335 58921383 -26517097 - L3 LINE CR1 -53 1524 1467 243 0 0 0 chr17 58922658 58922685 -26515795 + (TC)n Simple_repeat Simple_repeat 2 28 0 1323 210 101 54 chr17 58922948 58923372 -26515108 - MLT1C LTR MaLR -2 465 22 302 148 37 0 chr17 58923379 58923433 -26515047 - MLT1C LTR MaLR -334 56 1 544 310 73 20 chr17 58923579 58923824 -26514656 - MIR SINE MIR 0 262 5 1635 113 9 0 chr17 58924205 58924426 -26514054 - AluSx SINE Alu -89 223 1 605 76 0 33 chr17 58924572 58924664 -26513816 + AluSg/x SINE Alu 217 305 -4 783 231 157 0 chr17 58924803 58925019 -26513461 - MIR SINE MIR -4 258 9 227 347 84 11 chr17 58925349 58925444 -26513036 - MIR SINE MIR -159 103 2 2406 91 0 0 chr17 58929212 58929509 -26508971 - AluSq SINE Alu -10 303 7 1973 164 0 3 chr17 58929532 58929831 -26508649 - AluJb SINE Alu -14 298 1 2638 57 0 0 chr17 58930107 58930408 -26508072 - AluY SINE Alu -10 301 1 2632 39 7 7 chr17 58930942 58931250 -26507230 + AluY SINE Alu 1 308 -3 403 258 10 10 chr17 58931406 58931503 -26506977 - L2 LINE L2 0 3272 3176 297 343 38 0 chr17 58931579 58931684 -26506796 + L2 LINE L2 3164 3272 0 2177 124 10 0 chr17 58931752 58932051 -26506429 + AluSx SINE Alu 1 302 -10 354 290 228 44 chr17 58932130 58932609 -26505871 + L3 LINE CR1 905 1471 -106 288 314 119 0 chr17 58935025 58935143 -26503337 - MIR SINE MIR -18 244 113 187 347 28 0 chr17 58935137 58935209 -26503271 - MIR3 SINE MIR -121 87 14 * 451 228 55 69 chr17 58936237 58936283 -26502197 - MIR SINE MIR -63 199 154 2480 91 0 0 chr17 58936283 58936591 -26501889 - AluSx SINE Alu -4 308 1 451 228 55 69 chr17 58936591 58936689 -26501791 - MIR SINE MIR -108 154 57 2686 182 55 22 chr17 58937529 58938296 -26500184 - Charlie7 DNA MER1_type -5 2607 1765 656 290 142 26 chr17 58938305 58938763 -26499717 - Charlie7 DNA MER1_type -2049 563 53 1669 159 76 21 chr17 58938763 58939052 -26499428 - AluJo SINE Alu -7 305 1 420 277 129 19 chr17 58939061 58939216 -26499264 - MER5B DNA MER1_type -6 172 1 396 226 271 0 chr17 58939231 58939364 -26499116 - MER5A DNA MER1_type -7 182 14 2078 118 14 10 chr17 58940111 58940399 -26498081 - AluSx SINE Alu -23 289 1 452 299 8 8 chr17 58940708 58940835 -26497645 - MIR SINE MIR -122 140 14 740 160 0 15 chr17 58942013 58942144 -26496336 + FLAM_C SINE Alu 5 133 0 340 250 107 36 chr17 58942264 58942432 -26496048 - MER5A DNA MER1_type -9 180 1 182 277 12 60 chr17 58944170 58944253 -26494227 + MIR SINE MIR 117 195 -67 199 313 62 27 chr17 58945994 58946106 -26492374 + MIR SINE MIR 33 148 -114 662 211 217 62 chr17 58946108 58946278 -26492202 + L1MC4 LINE L1 7689 7831 -211 2385 82 0 3 chr17 58946278 58946572 -26491908 + AluSg SINE Alu 1 293 -17 662 211 217 62 chr17 58946572 58946705 -26491775 + L1MC4 LINE L1 7831 8039 -3 772 230 105 74 chr17 58947622 58948079 -26490401 + MLT1F LTR MaLR 66 536 -6 203 326 70 12 chr17 58948352 58948438 -26490042 + L2 LINE L2 3182 3272 -41 306 196 0 0 chr17 58949431 58949482 -26488998 + MER81 DNA DNA 1 51 -63 350 274 71 9 chr17 58949614 58949727 -26488753 - L1ME LINE L1 -461 5660 5541 2279 127 0 6 chr17 58950145 58950459 -26488021 - AluSx SINE Alu 0 312 1 2069 128 3 13 chr17 58951231 58951537 -26486943 - AluJb SINE Alu -9 303 1 186 133 0 0 chr17 58951707 58951737 -26486743 + (TTA)n Simple_repeat Simple_repeat 2 31 0 363 224 143 21 chr17 58952218 58952363 -26486117 + MIR SINE MIR 27 187 -62 318 115 0 0 chr17 58952363 58952415 -26486065 + (TG)n Simple_repeat Simple_repeat 2 53 0 579 309 95 41 chr17 58953303 58953598 -26484882 + L1M4 LINE L1 4532 4842 -1304 21 0 0 0 chr17 58953667 58953688 -26484792 + AT_rich Low_complexity Low_complexity 1 21 0 967 175 48 87 chr17 58953767 58953895 -26484585 + AluJo SINE Alu 1 132 -180 2157 127 0 0 chr17 58953895 58954208 -26484272 + AluSx SINE Alu 1 313 0 1533 182 45 22 chr17 58954214 58954527 -26483953 + 7SLRNA srpRNA srpRNA 1 320 0 967 175 48 87 chr17 58954527 58954619 -26483861 + AluJo SINE Alu 137 220 -92 2598 55 0 0 chr17 58954654 58954947 -26483533 - AluSc SINE Alu -15 294 2 23 54 0 0 chr17 58954958 58954995 -26483485 + AT_rich Low_complexity Low_complexity 1 37 0 216 295 90 62 chr17 58955376 58955620 -26482860 - L2 LINE L2 -26 3246 2996 385 238 109 14 chr17 58956227 58956394 -26482086 + MIR SINE MIR 3 190 -72 517 211 33 77 chr17 58956421 58956604 -26481876 - MER104 DNA Tc2 -3 177 3 642 139 62 62 chr17 58957539 58957683 -26480797 - L2 LINE L2 0 3313 3170 2068 116 34 3 chr17 58958036 58958330 -26480150 + AluSx SINE Alu 7 309 -3 596 201 49 49 chr17 58959004 58959168 -26479312 + MER3 DNA MER1_type 1 164 -45 1857 157 44 3 chr17 58960983 58961321 -26477159 - MLT1A1 LTR MaLR -13 352 1 249 224 92 13 chr17 58961324 58961400 -26477080 - MIR3 SINE MIR -112 96 15 405 284 163 36 chr17 58961798 58962276 -26476204 - LTR67 LTR ERVL -7 550 12 277 328 39 16 chr17 58964599 58964727 -26473753 + MIR3 SINE MIR 43 173 -35 184 244 39 110 chr17 58965026 58965153 -26473327 - MIR SINE MIR -106 156 39 491 236 79 28 chr17 58965195 58965253 -26473227 - MER3 DNA MER1_type -8 201 147 2357 114 0 0 chr17 58965253 58965561 -26472919 + AluSx SINE Alu 1 308 -4 491 236 79 28 chr17 58965561 58965680 -26472800 - MER3 DNA MER1_type -62 147 15 304 294 206 5 chr17 58969743 58969927 -26468553 + MIR SINE MIR 34 254 -8 2237 124 0 3 chr17 58970289 58970595 -26467885 + AluSx SINE Alu 1 305 -7 238 311 29 19 chr17 58970641 58970744 -26467736 - L2 LINE L2 -228 3044 2941 1326 274 133 2 chr17 58970789 58971216 -26467264 - MLT1J LTR MaLR -28 483 1 342 328 30 0 chr17 58971846 58971980 -26466500 + MER117 DNA MER1_type 1 138 -59 196 279 44 29 chr17 58973478 58973546 -26464934 + L2 LINE L2 3241 3309 -4 296 194 69 0 chr17 58973748 58973820 -26464660 + MIR SINE MIR 110 186 -76 237 281 98 33 chr17 58974595 58974649 -26463831 - L2 LINE L2 -183 3089 3040 1975 158 11 27 chr17 58974649 58974714 -26463766 - MLT1A1 LTR MaLR -3 362 297 1880 157 0 39 chr17 58974714 58975026 -26463454 + AluJo SINE Alu 1 300 -12 1975 158 11 27 chr17 58975026 58975327 -26463153 - MLT1A1 LTR MaLR -68 297 2 237 281 98 33 chr17 58975327 58975425 -26463055 - L2 LINE L2 -232 3040 2927 265 292 56 0 chr17 58976020 58976092 -26462388 - L2 LINE L2 -9 3263 3188 526 271 32 60 chr17 58976587 58976805 -26461675 - MIR SINE MIR 0 262 51 341 292 132 0 chr17 58976821 58976965 -26461515 + MIR SINE MIR 100 262 0 225 232 0 18 chr17 58976996 58977052 -26461428 - MIR3 SINE MIR -45 163 109 446 225 45 0 chr17 58978772 58978861 -26459619 + L2 LINE L2 3199 3291 -22 654 264 30 0 chr17 58979104 58979271 -26459209 + MER5B DNA MER1_type 1 172 -6 276 310 145 14 chr17 58980943 58981088 -26457392 - MIR3 SINE MIR -25 183 20 325 231 198 16 chr17 58981213 58981334 -26457146 - MER5B DNA MER1_type 0 178 36 772 200 11 72 chr17 58981486 58981528 -26456952 + MER5B DNA MER1_type 7 50 -128 1936 124 46 26 chr17 58981528 58981834 -26456646 - AluSx SINE Alu 0 312 1 772 200 11 72 chr17 58981834 58981971 -26456509 + MER5B DNA MER1_type 50 175 -3 259 379 86 17 chr17 58982204 58982378 -26456102 - L2 LINE L2 -10 3262 3077 398 303 67 28 chr17 58982617 58982795 -26455685 - MIR3 SINE MIR -17 191 7 2057 133 0 60 chr17 58983253 58983585 -26454895 + AluSx SINE Alu 1 312 0 2397 99 10 0 chr17 58983745 58984048 -26454432 - AluSx SINE Alu -6 306 1 1873 130 45 0 chr17 58984054 58984239 -26454241 - AluSx SINE Alu 0 315 111 453 19 0 0 chr17 58984239 58984293 -26454187 + (TG)n Simple_repeat Simple_repeat 2 55 0 1873 130 45 0 chr17 58984293 58984410 -26454070 - AluSx SINE Alu -204 111 1 714 193 198 24 chr17 58984417 58984629 -26453851 - MIR SINE MIR -12 250 2 310 198 63 0 chr17 58985236 58985480 -26453000 + (CA)n Simple_repeat Simple_repeat 1 259 0 386 146 49 24 chr17 58985533 58985697 -26452783 + (CA)n Simple_repeat Simple_repeat 2 169 0 22 0 0 0 chr17 58989594 58989616 -26448864 + GC_rich Low_complexity Low_complexity 1 22 0 202 371 30 30 chr17 58990833 58990965 -26447515 - L2 LINE L2 -7 3265 3134 1275 174 62 112 chr17 58995151 58995163 -26443317 - AluJo SINE Alu -7 305 294 246 32 0 0 chr17 58995163 58995194 -26443286 + (TTGG)n Simple_repeat Simple_repeat 1 31 0 1275 174 62 112 chr17 58995194 58995502 -26442978 - AluJo SINE Alu -18 294 1 248 307 29 95 chr17 58995624 58995761 -26442719 - MIR SINE MIR -76 132 5 23 0 0 0 chr17 58995838 58995861 -26442619 + AT_rich Low_complexity Low_complexity 1 23 0 307 274 188 51 chr17 58996720 58996975 -26441505 - L2 LINE L2 -174 3098 2809 221 343 94 52 chr17 58997240 58997473 -26441007 - L2 LINE L2 -35 3237 2995 25 0 0 0 chr17 58998235 58998260 -26440220 + AT_rich Low_complexity Low_complexity 1 25 0 546 291 159 14 chr17 58998495 58998715 -26439765 - MIR SINE MIR 0 262 11 215 340 43 4 chr17 59000128 59000247 -26438233 + MIR3 SINE MIR 3 185 -23 2305 111 3 0 chr17 59000343 59000650 -26437830 + AluSx SINE Alu 1 308 -4 434 286 19 0 chr17 59000976 59001081 -26437399 + MER5B DNA MER1_type 12 118 -60 391 306 109 22 chr17 59002303 59002532 -26435948 + MIR SINE MIR 8 256 -6 1962 112 0 0 chr17 59004023 59004273 -26434207 + AluSx SINE Alu 1 250 -62 300 321 93 12 chr17 59006563 59006725 -26431755 - L3b LINE CR1 -107 1476 1302 324 233 88 65 chr17 59006981 59007170 -26431310 - MIR3 SINE MIR -63 145 3 198 0 0 0 chr17 59010710 59010732 -26427748 + (TC)n Simple_repeat Simple_repeat 2 23 0 251 338 110 24 chr17 59011420 59011589 -26426891 + MIR SINE MIR 2 186 -67 384 209 0 0 chr17 59012319 59012410 -26426070 + (CA)n Simple_repeat Simple_repeat 1 91 0 198 103 0 0 chr17 59014774 59014803 -26423677 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 180 0 0 0 chr17 59015869 59015889 -26422591 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 22 0 0 0 chr17 59017104 59017126 -26421354 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr17 59017335 59017367 -26421113 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr17 59017475 59017497 -26420983 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr17 59017729 59017753 -26420727 + AT_rich Low_complexity Low_complexity 1 24 0 214 195 0 0 chr17 59017798 59017839 -26420641 + T-rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr17 59017918 59017939 -26420541 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr17 59018495 59018519 -26419961 + AT_rich Low_complexity Low_complexity 1 24 0 205 88 29 0 chr17 59019388 59019422 -26419058 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 218 79 0 26 chr17 59020530 59020568 -26417912 + (TA)n Simple_repeat Simple_repeat 2 38 0 25 0 0 0 chr17 59020757 59020782 -26417698 + AT_rich Low_complexity Low_complexity 1 25 0 315 148 16 33 chr17 59021637 59021698 -26416782 - U7 snRNA snRNA -2 61 2 199 290 130 0 chr17 59022156 59022225 -26416255 - MIR SINE MIR -88 120 43 1179 324 158 30 chr17 59022412 59023545 -26414935 + L1ME4a LINE L1 2114 3348 -2867 379 318 121 24 chr17 59023553 59024461 -26414019 + L1ME4a LINE L1 3397 4392 -1823 317 323 92 48 chr17 59024493 59024787 -26413693 + L1ME4a LINE L1 5727 6033 -157 271 77 0 0 chr17 59025284 59025331 -26413149 - L1PA6 LINE L1 -1 6153 6108 5568 210 61 78 chr17 59025641 59026439 -26412041 - L1ME1 LINE L1 -8 6953 6143 1699 179 0 28 chr17 59026439 59026724 -26411756 + AluJb SINE Alu 5 281 -31 5568 210 61 78 chr17 59026724 59028523 -26409957 - L1ME1 LINE L1 -818 6143 4356 1732 245 81 45 chr17 59028543 59028821 -26409659 - L1ME1 LINE L1 -4527 2595 2329 216 0 0 0 chr17 59028821 59028845 -26409635 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1732 245 81 45 chr17 59028845 59029285 -26409195 - L1ME1 LINE L1 -4793 2329 1906 1597 144 19 8 chr17 59029285 59029549 -26408931 - AluSg SINE Alu -8 302 36 1732 245 81 45 chr17 59029549 59029953 -26408527 - L1ME1 LINE L1 -5216 1906 1226 1945 181 0 12 chr17 59029954 59030290 -26408190 + MER58B DNA MER1_type 2 333 -8 915 187 57 38 chr17 59030292 59030501 -26407979 - L1ME1 LINE L1 -5200 1223 1011 527 283 41 0 chr17 59031146 59031291 -26407189 - MIR3 SINE MIR -1 207 57 263 238 62 25 chr17 59031688 59031768 -26406712 - LTR33A LTR ERVL 0 523 441 1608 194 35 62 chr17 59031812 59032213 -26406267 - MLT1B LTR MaLR 0 390 1 362 200 426 10 chr17 59032226 59032421 -26406059 - LTR50 LTR ERVL -496 299 24 1542 180 19 16 chr17 59032564 59032875 -26405605 + AluJo SINE Alu 1 312 0 189 0 0 0 chr17 59033250 59033271 -26405209 + (CA)n Simple_repeat Simple_repeat 2 22 0 264 222 26 52 chr17 59033302 59033455 -26405025 + (CTCA)n Simple_repeat Simple_repeat 4 152 0 2153 146 30 25 chr17 59033658 59034020 -26404460 - THE1B LTR MaLR 0 364 1 441 0 0 0 chr17 59034999 59035048 -26403432 + (TG)n Simple_repeat Simple_repeat 1 49 0 279 0 0 0 chr17 59035121 59035152 -26403328 + (GA)n Simple_repeat Simple_repeat 1 31 0 279 0 0 0 chr17 59035151 59035182 -26403298 + (TG)n Simple_repeat Simple_repeat 1 31 0 315 0 0 0 chr17 59035255 59035290 -26403190 + (GA)n Simple_repeat Simple_repeat 1 35 0 189 0 0 0 chr17 59035289 59035310 -26403170 + (TG)n Simple_repeat Simple_repeat 1 21 0 * 2339 74 3 0 chr17 59036727 59037024 -26401456 + AluSq SINE Alu 1 298 -15 2103 166 8 16 chr17 59037367 59037735 -26400745 + MLT1A1 LTR MaLR 1 365 0 1993 121 3 3 chr17 59037847 59038144 -26400336 + AluSx SINE Alu 1 297 -15 2201 106 0 0 chr17 59038663 59038965 -26399515 + AluSx SINE Alu 1 302 -10 368 230 0 0 chr17 59039141 59039215 -26399265 - MER20B DNA MER1_type -427 356 283 789 146 8 8 chr17 59039222 59039352 -26399128 - AluJb SINE Alu -178 134 5 322 308 10 0 chr17 59039357 59039461 -26399019 - MER20B DNA MER1_type -488 295 191 2616 223 82 26 chr17 59039664 59040185 -26398295 + MER20B DNA MER1_type 38 611 -172 1980 135 20 0 chr17 59040185 59040488 -26397992 + AluJb SINE Alu 1 309 -3 2616 223 82 26 chr17 59040488 59040670 -26397810 + MER20B DNA MER1_type 611 781 -2 2220 85 3 0 chr17 59041172 59041465 -26397015 + AluSp SINE Alu 1 294 -19 236 283 0 0 chr17 59043468 59043528 -26394952 + L2 LINE L2 3254 3313 0 199 222 0 56 chr17 59043760 59043814 -26394666 + MIR SINE MIR 103 153 -109 503 332 58 49 chr17 59044572 59044982 -26393498 + L2 LINE L2 2851 3264 -8 2223 145 43 32 chr17 59045087 59045550 -26392930 - L1MB8 LINE L1 0 6178 5711 1171 236 54 30 chr17 59045576 59046001 -26392479 - L1MC4 LINE L1 0 8042 7525 2705 83 14 0 chr17 59046001 59046362 -26392118 + THE1C LTR MaLR 1 366 -9 3952 223 60 24 chr17 59046362 59047385 -26391095 - L1MC4 LINE L1 -514 7528 6470 1827 256 131 51 chr17 59047849 59048936 -26389544 - L1MC5 LINE L1 -531 7430 6280 450 319 42 16 chr17 59049370 59049561 -26388919 - MLT1J LTR MaLR -165 346 151 283 302 81 0 chr17 59050091 59050177 -26388303 + MIR SINE MIR 93 185 -77 966 135 0 0 chr17 59050187 59050328 -26388152 + AluJo SINE Alu 1 141 -171 23 33 0 0 chr17 59050372 59050402 -26388078 + AT_rich Low_complexity Low_complexity 1 30 0 225 307 11 68 chr17 59050729 59050817 -26387663 + MIR SINE MIR 36 118 -90 278 283 30 0 chr17 59051473 59051588 -26386892 - MIR3 SINE MIR -46 162 44 230 275 0 69 chr17 59052304 59052435 -26386045 + C-rich Low_complexity Low_complexity 1 122 0 317 279 23 0 chr17 59052711 59052797 -26385683 - MIR SINE MIR -140 122 35 228 319 102 25 chr17 59053965 59054200 -26384280 + L1ME LINE L1 5631 5883 -238 1936 102 7 24 chr17 59054210 59054504 -26383976 + AluSx SINE Alu 1 289 -23 21 36 0 0 chr17 59054640 59054668 -26383812 + AT_rich Low_complexity Low_complexity 1 28 0 244 228 13 13 chr17 59054833 59054912 -26383568 + GA-rich Low_complexity Low_complexity 4 82 0 1391 289 168 26 chr17 59055040 59055738 -26382742 + L3 LINE CR1 117 913 -664 1489 137 67 16 chr17 59055835 59056090 -26382390 - AluJo SINE Alu -16 296 29 398 211 142 41 chr17 59056115 59056252 -26382228 - AluJo SINE Alu -109 193 87 290 272 5 141 chr17 59056271 59056455 -26382025 - MIR SINE MIR -83 179 21 607 293 85 23 chr17 59056457 59056864 -26381616 + MLT1L LTR MaLR 115 583 -32 187 123 0 185 chr17 59057266 59057331 -26381149 - L2 LINE L2 0 3313 3261 1210 177 18 26 chr17 59057345 59057510 -26380970 - MER58A DNA MER1_type -2196 224 60 1813 130 108 3 chr17 59057510 59057817 -26380663 - MER44D DNA MER2_type 0 609 1 1210 177 18 26 chr17 59057817 59057877 -26380603 - MER58A DNA MER1_type -2360 60 1 516 294 8 0 chr17 59058075 59058194 -26380286 - L2 LINE L2 -1 3312 3193 376 318 144 42 chr17 59058214 59058623 -26379857 + L2 LINE L2 2809 3259 -13 360 0 0 0 chr17 59058623 59058663 -26379817 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 207 250 0 0 chr17 59059349 59059393 -26379087 - MIR SINE MIR -102 160 117 530 260 145 26 chr17 59060599 59060826 -26377654 - MIR SINE MIR -1 261 8 366 151 27 0 chr17 59061434 59061507 -26376973 + AluJ/FRAM SINE Alu 228 302 0 2144 108 3 0 chr17 59061509 59061814 -26376666 + AluSp SINE Alu 2 307 -6 1853 159 199 2 chr17 59061815 59062237 -26376243 - L1MCa LINE L1 -5876 550 46 206 338 93 29 chr17 59062295 59062434 -26376046 - MIR SINE MIR -12 250 103 263 189 108 14 chr17 59063474 59063548 -26374932 - MIR SINE MIR -95 113 33 212 238 0 0 chr17 59063778 59063820 -26374660 + GA-rich Low_complexity Low_complexity 4 45 0 466 304 24 0 chr17 59065096 59065264 -26373216 + MER5B DNA MER1_type 5 176 -2 623 238 40 96 chr17 59065476 59065725 -26372755 - MIR SINE MIR 0 262 22 234 0 0 0 chr17 59067980 59068006 -26370474 + (CA)n Simple_repeat Simple_repeat 2 27 0 221 300 0 0 chr17 59068037 59068087 -26370393 + MIR SINE MIR 103 152 -110 269 189 85 123 chr17 59068102 59068183 -26370297 + MIR SINE MIR 31 109 -153 1223 234 169 33 chr17 59068183 59068662 -26369818 - MLT1H LTR MaLR -4 545 2 269 189 85 123 chr17 59068662 59068686 -26369794 + MIR SINE MIR 109 132 -130 2622 185 30 39 chr17 59068687 59068730 -26369750 - L1MB5 LINE L1 0 6174 6132 2219 103 7 0 chr17 59068730 59069040 -26369440 - AluSx SINE Alu 0 312 1 2622 185 30 39 chr17 59069040 59069590 -26368890 - L1MB5 LINE L1 -42 6132 5586 186 274 131 36 chr17 59069712 59069796 -26368684 - L2 LINE L2 -1 3271 3180 190 217 0 22 chr17 59069836 59069882 -26368598 + MIR3 SINE MIR 156 200 -8 2026 113 3 0 chr17 59070607 59070913 -26367567 - AluSx SINE Alu 0 307 1 362 211 0 73 chr17 59070940 59071049 -26367431 - MIR SINE MIR -55 207 107 318 115 0 0 chr17 59071136 59071188 -26367292 + (CA)n Simple_repeat Simple_repeat 1 52 0 415 320 41 0 chr17 59071525 59071647 -26366833 + MIR3 SINE MIR 77 203 -5 198 286 316 0 chr17 59071768 59071866 -26366614 + MIR3 SINE MIR 34 162 -46 395 265 58 42 chr17 59071868 59072057 -26366423 + MER117 DNA MER1_type 6 197 0 203 88 29 0 chr17 59072863 59072897 -26365583 + (GA)n Simple_repeat Simple_repeat 2 36 0 239 330 0 0 chr17 59073252 59073340 -26365140 - MIR SINE MIR -58 204 117 877 191 90 11 chr17 59073349 59073527 -26364953 - MER3 DNA MER1_type -17 192 1 1910 146 0 7 chr17 59074257 59074558 -26363922 - AluSx SINE Alu -13 299 1 2918 179 51 9 chr17 59074567 59075334 -26363146 - L1M4 LINE L1 -363 5821 5013 302 279 40 104 chr17 59075695 59075896 -26362584 - MIR SINE MIR -54 208 21 1680 177 3 0 chr17 59076887 59077206 -26361274 - AluJo SINE Alu 0 320 1 423 303 9 0 chr17 59077592 59077701 -26360779 + MER81 DNA DNA 4 113 -1 234 253 21 63 chr17 59078157 59078252 -26360228 + MLT1L LTR MaLR 162 252 -363 * 565 170 170 88 chr17 59078249 59078389 -26360091 - MSTD LTR MaLR -199 197 37 2209 117 0 0 chr17 59078389 59078688 -26359792 + AluSx SINE Alu 1 299 -13 565 170 170 88 chr17 59078688 59078729 -26359751 - MSTD LTR MaLR -359 37 1 2059 112 39 0 chr17 59078869 59079155 -26359325 + AluSx SINE Alu 1 297 -15 2127 119 3 31 chr17 59079157 59079477 -26359003 + AluSx SINE Alu 1 311 -1 335 263 43 64 chr17 59079953 59080144 -26358336 + MIR SINE MIR 15 203 -59 281 297 138 14 chr17 59081733 59081878 -26356602 + MIR3 SINE MIR 32 194 -14 278 278 205 26 chr17 59082247 59082398 -26356082 + L2 LINE L2 2245 2422 -892 1392 203 92 55 chr17 59082437 59082817 -26355663 + MSTD LTR MaLR 1 394 -2 361 298 74 8 chr17 59082883 59083004 -26355476 + MIR SINE MIR 25 153 -109 718 184 71 48 chr17 59083017 59083185 -26355295 + MER63A DNA MER1_type 32 203 -7 321 307 173 13 chr17 59083407 59083557 -26354923 + MIR3 SINE MIR 3 176 -32 251 311 48 19 chr17 59083652 59083755 -26354725 + L2 LINE L2 3143 3248 -24 191 219 0 0 chr17 59083959 59084000 -26354480 + L2 LINE L2 3265 3305 -8 288 77 0 0 chr17 59084044 59084083 -26354397 + (TC)n Simple_repeat Simple_repeat 2 40 0 589 263 118 30 chr17 59084902 59085172 -26353308 - MLT1L LTR MaLR -321 294 1 1994 90 101 4 chr17 59085305 59085582 -26352898 + AluY SINE Alu 1 304 -7 189 0 0 0 chr17 59085622 59085643 -26352837 + (A)n Simple_repeat Simple_repeat 1 21 0 720 191 0 0 chr17 59085849 59086027 -26352453 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 213 94 0 0 chr17 59086043 59086075 -26352405 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 451 236 224 50 chr17 59086086 59086506 -26351974 - L2 LINE L2 -17 3296 2804 216 97 0 0 chr17 59088672 59088703 -26349777 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 278 274 0 0 chr17 59088706 59088768 -26349712 - L2 LINE L2 -8 3264 3203 367 248 0 67 chr17 59089165 59089270 -26349210 - MER5A DNA MER1_type -7 182 85 893 160 0 0 chr17 59089295 59089426 -26349054 - FLAM_C SINE Alu -2 131 1 443 252 19 9 chr17 59089426 59089533 -26348947 + MER81 DNA DNA 7 114 0 703 294 106 47 chr17 59089538 59090116 -26348364 + MLT1L LTR MaLR 4 615 0 1190 139 11 21 chr17 59090189 59090376 -26348104 + MER5A DNA MER1_type 1 185 -4 413 299 59 37 chr17 59090879 59091006 -26347474 - Tigger8 DNA MER2_type -2 664 541 2450 83 0 13 chr17 59091006 59091319 -26347161 + AluSp SINE Alu 1 309 -4 413 299 59 37 chr17 59091319 59091462 -26347018 - Tigger8 DNA MER2_type -125 541 388 21 0 0 0 chr17 59091464 59091485 -26346995 + AT_rich Low_complexity Low_complexity 1 21 0 362 318 123 8 chr17 59091572 59091824 -26346656 - Tigger8 DNA MER2_type -295 371 91 2471 81 3 0 chr17 59092605 59092903 -26345577 - AluSp SINE Alu -2 311 13 268 271 52 117 chr17 59094175 59094421 -26344059 - MER102b DNA MER1_type -1089 339 120 2355 90 0 10 chr17 59094421 59094720 -26343760 + AluSg SINE Alu 1 296 -14 268 271 52 117 chr17 59094720 59094816 -26343664 - MER102b DNA MER1_type -1308 120 19 258 262 135 8 chr17 59094835 59094961 -26343519 - MIR3 SINE MIR -52 156 15 828 188 34 0 chr17 59095316 59095465 -26343015 + MIR SINE MIR 35 188 -74 373 194 14 0 chr17 59095479 59095551 -26342929 + AluJ/FRAM SINE Alu 224 296 -6 183 250 16 16 chr17 59095559 59095623 -26342857 + MIR SINE MIR 195 258 -4 192 288 54 90 chr17 59095672 59095783 -26342697 - MIR3 SINE MIR -4 204 98 1908 123 7 18 chr17 59095838 59096122 -26342358 - AluSx SINE Alu -12 300 20 480 286 70 6 chr17 59096620 59096791 -26341689 + MIR SINE MIR 7 188 -74 389 260 105 94 chr17 59097422 59097477 -26341003 - MIR SINE MIR -1 261 208 2339 103 13 0 chr17 59097477 59097779 -26340701 - AluSx SINE Alu -6 306 1 389 260 105 94 chr17 59097779 59097904 -26340576 - MIR SINE MIR -54 208 79 230 279 47 0 chr17 59099684 59099770 -26338710 + L1ME LINE L1 5452 5541 -625 1865 155 0 0 chr17 59099826 59100097 -26338383 + AluJb SINE Alu 1 271 -41 1636 101 0 0 chr17 59100103 59100312 -26338168 + AluSq SINE Alu 57 265 -48 189 74 0 0 chr17 59100312 59100339 -26338141 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 423 200 41 147 chr17 59100531 59100574 -26337906 + MIR SINE MIR 110 156 -106 2326 67 3 11 chr17 59100574 59100896 -26337584 - AluY SINE Alu 0 320 1 423 200 41 147 chr17 59100896 59101021 -26337459 + MIR SINE MIR 156 261 -1 195 368 35 0 chr17 59101672 59101759 -26336721 - MIR SINE MIR -119 143 54 467 203 78 0 chr17 59101775 59101928 -26336552 - MER33 DNA MER1_type 0 324 160 456 138 0 0 chr17 59101959 59102024 -26336456 + AluJo SINE Alu 63 127 -185 829 179 6 19 chr17 59102080 59102236 -26336244 + AluJo SINE Alu 120 273 -39 198 0 0 0 chr17 59102243 59102265 -26336215 + (GA)n Simple_repeat Simple_repeat 1 22 0 422 231 26 17 chr17 59102265 59102382 -26336098 - MER33 DNA MER1_type -184 140 23 413 239 82 0 chr17 59102967 59103092 -26335388 + MIR SINE MIR 31 163 -57 210 143 0 0 chr17 59103395 59103430 -26335050 + (TC)n Simple_repeat Simple_repeat 1 35 0 396 0 0 0 chr17 59103430 59103474 -26335006 + (TG)n Simple_repeat Simple_repeat 2 45 0 435 294 17 0 chr17 59103928 59104047 -26334433 - MIR3 SINE MIR -27 181 61 215 224 0 0 chr17 59106009 59106058 -26332422 + (ATG)n Simple_repeat Simple_repeat 3 51 0 527 283 101 23 chr17 59106831 59107028 -26331452 - MIR SINE MIR -31 231 17 337 355 32 34 chr17 59107145 59107384 -26331096 + L1MB5 LINE L1 5706 5940 -234 2158 108 6 44 chr17 59107587 59107902 -26330578 + AluSx SINE Alu 1 303 -9 633 234 102 78 chr17 59107964 59108487 -26329993 - MLT1H LTR MaLR 0 555 30 598 235 131 6 chr17 59111147 59111330 -26327150 + MLT1J2 LTR MaLR 21 227 -223 714 236 122 63 chr17 59113273 59113639 -26324841 - MLT1J LTR MaLR -53 458 1 487 306 78 57 chr17 59113652 59113897 -26324583 + MIR SINE MIR 12 261 -1 812 125 100 0 chr17 59114207 59114327 -26324153 + FLAM_C SINE Alu 1 132 -1 1011 249 32 0 chr17 59114449 59114666 -26323814 + MER58A DNA MER1_type 1 224 0 742 276 35 8 chr17 59114959 59115213 -26323267 + L1ME LINE L1 5520 5780 -341 1449 183 4 57 chr17 59115214 59115493 -26322987 + AluSx SINE Alu 1 264 -48 765 172 8 0 chr17 59115493 59115627 -26322853 + AluJb SINE Alu 174 308 -4 1885 160 28 6 chr17 59115952 59116277 -26322203 + MLT1A1 LTR MaLR 34 365 0 1957 127 40 30 chr17 59116612 59116912 -26321568 + AluSq SINE Alu 3 305 -8 334 322 21 38 chr17 59117244 59117448 -26321032 + MIR SINE MIR 45 248 -14 2250 82 36 0 chr17 59118574 59118855 -26319625 - AluSg SINE Alu -19 291 1 363 287 177 6 chr17 59119759 59119940 -26318540 + MIR SINE MIR 51 262 0 2844 252 99 34 chr17 59120223 59121800 -26316680 + L2 LINE L2 1621 3303 -10 2413 94 0 0 chr17 59121802 59122100 -26316380 + AluSx SINE Alu 1 298 -14 575 267 13 7 chr17 59123681 59123831 -26314649 + MIR SINE MIR 108 258 -4 476 261 142 0 chr17 59124900 59125111 -26313369 + L1ME4a LINE L1 5538 5778 -343 415 305 45 7 chr17 59125271 59125425 -26313055 + L1ME4a LINE L1 5961 6120 -1 1158 98 0 138 chr17 59125556 59125780 -26312700 + 7SK RNA RNA 1 193 0 509 220 65 27 chr17 59126779 59126965 -26311515 - L1MC5 LINE L1 -78 7883 7691 2123 110 3 0 chr17 59126972 59127283 -26311197 + AluSx SINE Alu 1 312 0 195 129 0 0 chr17 59127328 59127359 -26311121 + (T)n Simple_repeat Simple_repeat 1 31 0 447 188 47 23 chr17 59127495 59127623 -26310857 - L1MC5 LINE L1 -301 7660 7530 399 316 46 20 chr17 59127705 59127857 -26310623 - L2 LINE L2 -1 3271 3116 2312 106 10 0 chr17 59127937 59128238 -26310242 - AluSg SINE Alu -6 304 1 4710 233 54 30 chr17 59128323 59128367 -26310113 + L1MEc LINE L1 808 849 -5366 2238 137 0 0 chr17 59128367 59128673 -26309807 + AluSx SINE Alu 1 306 -6 4710 233 54 30 chr17 59128673 59129338 -26309142 + L1MEc LINE L1 849 1497 -4718 1819 174 0 0 chr17 59129338 59129642 -26308838 + AluSx SINE Alu 1 304 -8 4710 233 54 30 chr17 59129642 59129916 -26308564 + L1MEc LINE L1 1497 1763 -4452 2418 59 0 10 chr17 59129916 59130221 -26308259 - AluY SINE Alu -9 302 1 4710 233 54 30 chr17 59130221 59130645 -26307835 + L1MEc LINE L1 1763 2233 -3982 2131 98 0 43 chr17 59130645 59130970 -26307510 + AluSq SINE Alu 1 311 -2 4710 233 54 30 chr17 59130970 59131307 -26307173 + L1MEc LINE L1 2233 2561 -3654 2357 237 102 14 chr17 59131313 59132095 -26306385 + L1M4 LINE L1 4205 5055 -1091 2143 112 6 6 chr17 59132191 59132503 -26305977 + AluSx SINE Alu 1 312 0 219 302 121 26 chr17 59132540 59132656 -26305824 + L3 LINE CR1 965 1091 -486 2033 208 63 9 chr17 59132671 59133132 -26305348 - L1ME3A LINE L1 -11 6159 5674 3881 221 64 32 chr17 59133132 59133494 -26304986 - L1ME3A LINE L1 -1268 4878 4529 1458 182 32 71 chr17 59133494 59133562 -26304918 - MLT1B LTR MaLR 0 390 321 2096 101 0 0 chr17 59133562 59133840 -26304640 + AluSx SINE Alu 1 278 -34 603 0 0 0 chr17 59133840 59133907 -26304573 + (TC)n Simple_repeat Simple_repeat 2 68 0 360 0 0 0 chr17 59133906 59133946 -26304534 + (TA)n Simple_repeat Simple_repeat 1 40 0 1458 182 32 71 chr17 59133907 59134282 -26304198 - MLT1B LTR MaLR -67 323 1 3881 221 64 32 chr17 59134282 59134911 -26303569 - L1ME3A LINE L1 -1617 4529 3844 1877 136 6 19 chr17 59134911 59135227 -26303253 - AluSx SINE Alu 0 312 1 3881 221 64 32 chr17 59135227 59135380 -26303100 - L1ME3A LINE L1 -2302 3844 3697 2211 149 31 18 chr17 59135380 59135763 -26302717 - Tigger2 DNA MER2_type 0 2718 2331 2326 71 0 0 chr17 59135825 59136142 -26302338 - AluY SINE Alu 0 311 1 303 181 56 0 chr17 59136163 59136235 -26302245 - L1ME3A LINE L1 -3643 2503 2428 29 0 0 0 chr17 59136308 59136337 -26302143 + AT_rich Low_complexity Low_complexity 1 29 0 2508 133 30 28 chr17 59136508 59136935 -26301545 + MSTA LTR MaLR 1 428 0 3788 162 51 14 chr17 59136935 59137625 -26300855 + MSTA-int LTR MaLR 1 715 -936 1892 120 18 7 chr17 59137625 59137900 -26300580 + MSTA LTR MaLR 151 428 0 294 385 84 10 chr17 59137958 59138257 -26300223 - L3 LINE CR1 -753 824 504 1074 271 53 38 chr17 59138372 59138822 -26299658 + LTR16A1 LTR ERVL 1 457 0 1973 108 0 68 chr17 59139839 59140028 -26298452 - AluSg SINE Alu -9 301 141 2166 64 0 11 chr17 59140028 59140310 -26298170 - AluY SINE Alu -32 279 1 1973 108 0 68 chr17 59140310 59140443 -26298037 - AluSg SINE Alu -169 141 1 409 172 0 0 chr17 59140465 59140529 -26297951 - AluJ/FRAM SINE Alu -24 288 225 2045 111 7 0 chr17 59140903 59141192 -26297288 + AluY SINE Alu 1 291 -20 321 155 0 28 chr17 59141250 59141321 -26297159 - MER3 DNA MER1_type -5 204 136 858 62 36 0 chr17 59141370 59141482 -26296998 - AluSq/x SINE Alu -197 116 1 509 219 18 9 chr17 59141482 59141596 -26296884 - MER3 DNA MER1_type -58 151 37 953 127 0 20 chr17 59142154 59142342 -26296138 - FRAM SINE Alu 0 184 1 1622 78 9 5 chr17 59142640 59142858 -26295622 - AluSx SINE Alu -93 219 1 2154 122 0 0 chr17 59143289 59143626 -26294854 - AluSq SINE Alu 0 337 1 183 167 33 0 chr17 59143830 59143860 -26294620 - L2 LINE L2 -25 3247 3217 369 168 78 12 chr17 59145277 59145362 -26293118 - FRAM SINE Alu -66 100 24 492 274 110 34 chr17 59145525 59145811 -26292669 - L1ME4a LINE L1 -234 5887 5612 1310 207 0 47 chr17 59145812 59146111 -26292369 - AluJo SINE Alu -15 297 13 811 257 29 45 chr17 59146116 59146397 -26292083 - L1ME4a LINE L1 -544 5618 5353 2216 102 0 0 chr17 59146397 59146691 -26291789 + AluSx SINE Alu 1 294 -18 811 257 29 45 chr17 59146691 59146782 -26291698 - L1ME4a LINE L1 -809 5353 5262 362 312 50 63 chr17 59147056 59147277 -26291203 + L2 LINE L2 2959 3176 -96 751 188 0 8 chr17 59147727 59147855 -26290625 - FRAM SINE Alu -24 152 26 1911 170 21 96 chr17 59148170 59148443 -26290037 + MLT1D LTR MaLR 26 318 -187 2012 136 0 0 chr17 59148443 59148744 -26289736 + AluSx SINE Alu 1 301 -11 1911 170 21 96 chr17 59148744 59148932 -26289548 + MLT1D LTR MaLR 318 446 -59 2282 132 0 20 chr17 59148932 59149274 -26289206 + MER1B DNA MER1_type 3 337 0 1911 170 21 96 chr17 59149274 59149330 -26289150 + MLT1D LTR MaLR 446 505 0 1703 154 0 24 chr17 59149448 59149746 -26288734 + AluJo SINE Alu 1 291 -21 2782 144 9 9 chr17 59149747 59150211 -26288269 + L1PA16 LINE L1 5694 6157 -9 319 274 127 61 chr17 59150341 59150369 -26288111 - L1ME LINE L1 -394 5727 5702 1951 128 3 10 chr17 59150369 59150675 -26287805 + AluSx SINE Alu 1 304 -8 319 274 127 61 chr17 59150675 59150843 -26287637 - L1ME LINE L1 -419 5702 5518 234 0 0 0 chr17 59151109 59151135 -26287345 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 202 208 0 0 chr17 59151291 59151344 -26287136 + T-rich Low_complexity Low_complexity 2 54 0 280 275 0 22 chr17 59152990 59153081 -26285399 + MLT1K LTR MaLR 181 269 -319 1947 153 0 3 chr17 59153412 59153725 -26284755 - AluJo SINE Alu 0 312 1 446 210 43 97 chr17 59153938 59154053 -26284427 + L1MC5 LINE L1 7732 7852 -109 2020 98 0 34 chr17 59154053 59154349 -26284131 + AluSx SINE Alu 1 286 -26 300 53 0 0 chr17 59154349 59154387 -26284093 + (TA)n Simple_repeat Simple_repeat 2 39 0 446 210 43 97 chr17 59154387 59154456 -26284024 + L1MC5 LINE L1 7850 7907 -54 1803 157 0 0 chr17 59154466 59154752 -26283728 + AluJb SINE Alu 9 294 -18 1397 188 7 31 chr17 59154763 59155076 -26283404 + AluJo SINE Alu 3 308 0 559 294 96 47 chr17 59155231 59156417 -26282063 - L1MC/D LINE L1 -750 5396 4562 1840 182 46 26 chr17 59156596 59156803 -26281677 - MLT1A1 LTR MaLR 0 365 147 1992 113 36 3 chr17 59156803 59157104 -26281376 - AluSq SINE Alu -2 311 1 1840 182 46 26 chr17 59157104 59157247 -26281233 - MLT1A1 LTR MaLR -218 147 8 435 240 29 0 chr17 59157822 59157926 -26280554 - MER96 DNA MER1_type? -68 107 1 236 319 118 29 chr17 59157939 59158194 -26280286 + LTR16A LTR ERVL 1 270 -180 1100 311 63 65 chr17 59158204 59158573 -26279907 + ERVL LTR ERVL 2977 3346 -2418 2138 108 16 0 chr17 59158573 59158880 -26279600 + AluSx SINE Alu 1 312 0 1100 311 63 65 chr17 59158880 59159236 -26279244 + ERVL LTR ERVL 3346 3701 -2063 462 332 18 22 chr17 59159273 59159590 -26278890 + ERVL LTR ERVL 4803 4898 -98 1020 271 39 3 chr17 59159710 59160104 -26278376 + LTR16A LTR ERVL 19 444 -6 565 260 60 35 chr17 59160968 59161168 -26277312 - MIR SINE MIR -55 207 3 2104 113 0 3 chr17 59161423 59161723 -26276757 - AluSx SINE Alu -13 299 1 1977 130 10 3 chr17 59161887 59162194 -26276286 + AluSx SINE Alu 3 311 -1 325 309 95 0 chr17 59162485 59162611 -26275869 - L1MEd LINE L1 -5453 666 529 298 220 88 33 chr17 59163268 59163359 -26275121 + MIR SINE MIR 61 156 -106 1926 67 0 28 chr17 59163363 59163617 -26274863 + AluSq SINE Alu 1 247 -66 1031 109 14 0 chr17 59163617 59163764 -26274716 + AluSg/x SINE Alu 141 289 -21 297 296 28 46 chr17 59163765 59163873 -26274607 + MIR SINE MIR 149 254 -8 369 286 48 0 chr17 59164827 59164932 -26273548 - MER91C DNA MER1_type -30 110 1 353 239 109 6 chr17 59164944 59165093 -26273387 + MIR SINE MIR 15 254 -8 2237 96 16 0 chr17 59165277 59165580 -26272900 + AluSc SINE Alu 1 308 -1 319 268 83 55 chr17 59165680 59165977 -26272503 + L1ME3A LINE L1 5476 5774 -388 647 157 209 8 chr17 59166010 59166144 -26272336 - FRAM SINE Alu -19 157 1 180 0 0 0 chr17 59166148 59166168 -26272312 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2285 74 0 0 chr17 59166168 59166491 -26271989 - AluSq SINE Alu 0 323 1 712 265 55 15 chr17 59166495 59166767 -26271713 - HsTC2 DNA Tc2 -109 1789 1331 1071 184 42 19 chr17 59166787 59166999 -26271481 - MIR SINE MIR -28 234 18 308 364 0 0 chr17 59167019 59167184 -26271296 + L1ME3A LINE L1 5784 5948 -222 232 221 12 35 chr17 59167338 59167424 -26271056 + L1MC5 LINE L1 7845 7928 -33 1679 148 17 3 chr17 59167747 59168044 -26270436 + AluJo SINE Alu 1 301 -11 2098 100 7 0 chr17 59168409 59168709 -26269771 + AluSp SINE Alu 1 302 -11 242 295 62 9 chr17 59168906 59169018 -26269462 + L1MC4 LINE L1 7779 7896 -146 675 171 0 6 chr17 59169018 59169282 -26269198 + AluJ SINE Alu 1 312 0 316 284 11 32 chr17 59169299 59169375 -26269105 + L1MC5 LINE L1 7805 7880 -81 2185 105 3 3 chr17 59169375 59169681 -26268799 - AluSx SINE Alu -6 306 1 316 284 11 32 chr17 59169681 59169699 -26268781 + L1MC5 LINE L1 7880 7897 -64 1467 168 0 54 chr17 59169731 59170056 -26268424 - AluJo SINE Alu 0 309 1 412 291 106 20 chr17 59170144 59170295 -26268185 - MIR3 SINE MIR -29 179 16 2322 84 0 0 chr17 59170691 59170989 -26267491 + AluSx SINE Alu 1 298 -14 2107 109 0 22 chr17 59170989 59171309 -26267171 + AluSq SINE Alu 1 313 0 186 284 75 15 chr17 59171564 59171631 -26266849 - L3b LINE CR1 -207 1376 1306 250 368 0 11 chr17 59172488 59172575 -26265905 - MIR SINE MIR -85 123 38 1736 148 3 55 chr17 59173063 59173388 -26265092 + AluJo SINE Alu 1 308 -4 607 252 59 9 chr17 59173839 59174025 -26264455 - MIR SINE MIR -61 147 3 182 226 59 98 chr17 59176516 59176618 -26261862 - MIR SINE MIR -54 208 111 1963 122 14 3 chr17 59176816 59177110 -26261370 - AluSx SINE Alu -11 301 5 2231 82 0 10 chr17 59177538 59177842 -26260638 - AluSx SINE Alu -11 301 1 280 246 173 18 chr17 59178110 59178220 -26260260 + L1ME LINE L1 5502 5628 -493 1382 132 32 65 chr17 59178556 59178866 -26259614 + AluJo SINE Alu 10 309 -3 1992 145 0 3 chr17 59178870 59179181 -26259299 + AluSx SINE Alu 1 310 -2 280 161 36 18 chr17 59179995 59180051 -26258429 - L2 LINE L2 0 3272 3216 2418 64 0 0 chr17 59180969 59181266 -26257214 + AluY SINE Alu 1 297 -14 320 250 0 0 chr17 59181447 59181511 -26256969 - MER2 DNA MER2_type -2 343 280 32 0 0 0 chr17 59181516 59181548 -26256932 + AT_rich Low_complexity Low_complexity 1 32 0 1050 172 29 0 chr17 59181548 59181752 -26256728 - MER2 DNA MER2_type -134 211 2 1654 168 54 7 chr17 59182542 59182840 -26255640 + AluSx SINE Alu 1 312 0 883 162 16 60 chr17 59182843 59182878 -26255602 - L1MB5 LINE L1 -6 6168 6133 1672 147 7 27 chr17 59182878 59183177 -26255303 - AluJo SINE Alu -19 293 1 883 162 16 60 chr17 59183177 59183326 -26255154 - L1MB5 LINE L1 -41 6133 5992 731 290 33 12 chr17 59183347 59183592 -26254888 - L1MB5 LINE L1 -2063 5745 5496 710 207 0 96 chr17 59183604 59183755 -26254725 + AluJb SINE Alu 1 132 -180 396 0 0 0 chr17 59183755 59183799 -26254681 + (CA)n Simple_repeat Simple_repeat 2 45 0 710 207 0 96 chr17 59183799 59183835 -26254645 + AluJb SINE Alu 132 170 -142 21 0 0 0 chr17 59183835 59183856 -26254624 + AT_rich Low_complexity Low_complexity 1 21 0 1772 151 27 7 chr17 59183856 59184148 -26254332 + AluJb SINE Alu 1 298 -14 513 238 64 12 chr17 59184168 59184340 -26254140 - L1MB5 LINE L1 -2320 5488 5308 1345 204 88 9 chr17 59184343 59184661 -26253819 + MLT1A1 LTR MaLR 1 343 -22 227 267 140 46 chr17 59184666 59184951 -26253529 - L1MB5 LINE L1 -843 5303 4992 1051 162 6 22 chr17 59184981 59185160 -26253320 - FAM SINE Alu -2 47 1 32 43 0 0 chr17 59185293 59185339 -26253141 + AT_rich Low_complexity Low_complexity 1 46 0 1899 111 6 57 chr17 59185341 59185657 -26252823 + AluSx SINE Alu 1 300 -12 1939 136 0 10 chr17 59185746 59186047 -26252433 - AluSx SINE Alu 0 312 15 249 300 25 0 chr17 59186685 59186765 -26251715 - L2 LINE L2 -5 3267 3186 227 200 40 0 chr17 59186762 59186812 -26251668 + L2 LINE L2 3220 3271 -1 * 5448 78 12 24 chr17 59186997 59187847 -26250633 + SVA Other Other 596 1436 0 2165 95 10 0 chr17 59187879 59188174 -26250306 + AluSg SINE Alu 1 298 -12 2376 59 0 0 chr17 59188244 59188532 -26249948 + AluY SINE Alu 1 288 -23 1880 143 3 3 chr17 59188564 59188858 -26249622 - AluSx SINE Alu -16 296 3 718 183 24 0 chr17 59188960 59189086 -26249394 - FLAM_C SINE Alu -4 129 1 336 257 0 14 chr17 59189091 59189165 -26249315 + L1ME4a LINE L1 6048 6120 -1 2162 77 0 0 chr17 59189265 59189539 -26248941 - AluSx SINE Alu -38 274 1 449 287 77 49 chr17 59189642 59189889 -26248591 + MIR SINE MIR 9 262 0 474 338 63 16 chr17 59191651 59192035 -26246445 + L1MC4a LINE L1 5596 5722 -448 324 289 133 0 chr17 59192283 59192411 -26246069 - MIR SINE MIR -57 205 61 357 24 0 0 chr17 59192539 59192581 -26245899 + (CA)n Simple_repeat Simple_repeat 2 43 0 458 281 12 47 chr17 59193474 59193545 -26244935 + MIR SINE MIR 76 148 -114 1506 141 141 4 chr17 59193545 59193832 -26244648 + AluJo SINE Alu 2 322 0 458 281 12 47 chr17 59193832 59193930 -26244550 + MIR SINE MIR 148 240 -22 2182 122 28 36 chr17 59194200 59194593 -26243887 - MLT1B LTR MaLR 0 390 1 529 200 15 44 chr17 59194604 59194739 -26243741 + LTR33 LTR ERVL 2 132 -389 487 200 28 48 chr17 59194798 59194943 -26243537 + LTR33 LTR ERVL 301 442 -79 2015 110 0 63 chr17 59194971 59195290 -26243190 + AluSx SINE Alu 1 299 -13 917 135 0 0 chr17 59195492 59195625 -26242855 + AluJo SINE Alu 1 133 -169 850 226 6 0 chr17 59195655 59195832 -26242648 + AluJo SINE Alu 121 298 -14 2023 125 0 23 chr17 59195931 59196235 -26242245 + AluSx SINE Alu 1 297 -15 184 315 73 67 chr17 59196393 59196571 -26241909 + L2 LINE L2 3060 3238 -34 600 215 37 7 chr17 59196849 59196984 -26241496 + MIR SINE MIR 111 249 -13 1947 141 3 3 chr17 59197048 59197354 -26241126 + AluJo SINE Alu 1 306 -6 302 200 0 0 chr17 59197399 59197454 -26241026 - Alu SINE Alu -7 294 240 2121 96 0 3 chr17 59197456 59197738 -26240742 - AluSx SINE Alu -31 281 1 266 182 212 15 chr17 59198083 59198149 -26240331 - MER5A DNA MER1_type -86 103 25 372 263 0 0 chr17 59198153 59198229 -26240251 - MER81 DNA DNA 0 114 39 317 175 16 0 chr17 59198420 59198483 -26239997 - MER69 DNA AcHobo -3 2523 2460 2323 87 0 7 chr17 59198487 59198797 -26239683 + AluSq SINE Alu 1 308 -5 280 78 20 0 chr17 59198798 59198849 -26239631 - MER69 DNA AcHobo -2377 149 98 346 293 195 24 chr17 59199346 59199551 -26238929 + MIR SINE MIR 9 248 -14 680 168 168 0 chr17 59200112 59200261 -26238219 + MER5B DNA MER1_type 5 178 0 586 242 159 6 chr17 59200269 59200426 -26238054 - MER5A DNA MER1_type 0 189 9 806 196 129 0 chr17 59200444 59200607 -26237873 - MER5A DNA MER1_type -2 187 4 362 273 168 31 chr17 59200623 59200784 -26237696 + MIR SINE MIR 23 205 -57 247 196 187 56 chr17 59200801 59200908 -26237572 - MER5B DNA MER1_type -3 175 55 828 233 0 0 chr17 59200910 59201060 -26237420 - FRAM SINE Alu -16 160 11 1627 137 3 73 chr17 59201079 59201394 -26237086 - AluJo SINE Alu -19 293 1 201 217 65 0 chr17 59201406 59201452 -26237028 + MER5B DNA MER1_type 125 173 -5 582 171 179 0 chr17 59201465 59201588 -26236892 - MER5A DNA MER1_type -3 186 42 292 287 143 66 chr17 59201840 59202084 -26236396 + L3 LINE CR1 1302 1564 -13 2240 95 20 0 chr17 59204591 59204895 -26233585 + AluSg SINE Alu 1 310 0 1891 130 3 14 chr17 59205639 59205923 -26232557 + AluSx SINE Alu 4 284 -28 297 0 0 0 chr17 59205923 59205956 -26232524 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2384 90 0 0 chr17 59206676 59206987 -26231493 - AluSq SINE Alu -2 311 1 219 322 207 0 chr17 59207021 59207142 -26231338 + L2 LINE L2 3127 3272 0 473 205 33 73 chr17 59207575 59207726 -26230754 + MIR3 SINE MIR 41 185 -23 502 273 153 6 chr17 59210282 59210458 -26228022 - MER63A DNA MER1_type -5 205 4 189 403 0 0 chr17 59211273 59211350 -26227130 + L2 LINE L2 3237 3313 0 1950 138 0 19 chr17 59211536 59211847 -26226633 - AluJo SINE Alu -7 305 1 212 259 0 19 chr17 59212438 59212492 -26225988 - MIR3 SINE MIR -17 191 139 2107 124 0 3 chr17 59212506 59212813 -26225667 + AluSx SINE Alu 1 306 -6 190 244 128 0 chr17 59213194 59213272 -26225208 + L2 LINE L2 3202 3289 -24 183 247 151 0 chr17 59214900 59214973 -26223507 + L2 LINE L2 3168 3251 -21 322 348 9 9 chr17 59215073 59215185 -26223295 + MIR SINE MIR 32 143 -65 210 118 0 59 chr17 59215709 59215760 -26222720 + (CGGGGG)n Simple_repeat Simple_repeat 4 51 0 358 331 77 6 chr17 59216953 59217134 -26221346 + L2 LINE L2 2650 2843 -471 365 326 82 47 chr17 59217171 59217514 -26220966 + L2 LINE L2 2915 3269 -3 540 256 87 0 chr17 59217728 59217900 -26220580 - MIR SINE MIR -32 230 44 764 174 8 23 chr17 59218214 59218346 -26220134 + FLAM_A SINE Alu 1 130 -3 21 0 0 0 chr17 59218437 59218458 -26220022 + AT_rich Low_complexity Low_complexity 1 21 0 2089 118 7 0 chr17 59218474 59218778 -26219702 + AluSx SINE Alu 6 311 -1 411 289 161 23 chr17 59219044 59219262 -26219218 + MIR SINE MIR 10 257 -5 351 0 0 0 chr17 59219512 59219551 -26218929 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 2080 101 0 0 chr17 59219555 59219831 -26218649 - AluSx SINE Alu -36 276 1 564 268 77 6 chr17 59219984 59220167 -26218313 + MER117 DNA MER1_type 1 196 -1 286 336 41 25 chr17 59220169 59220291 -26218189 + L2 LINE L2 3137 3260 -12 194 357 0 0 chr17 59220295 59220365 -26218115 - L3b LINE CR1 -185 1398 1329 451 290 98 22 chr17 59220616 59221104 -26217376 + L1ME3A LINE L1 5430 6162 -8 314 273 50 16 chr17 59221131 59221252 -26217228 - MIR SINE MIR -55 207 83 988 87 0 0 chr17 59221576 59221703 -26216777 - AluSg/x SINE Alu -117 193 67 222 171 0 0 chr17 59222035 59222076 -26216404 + (CA)n Simple_repeat Simple_repeat 1 41 0 2710 128 9 49 chr17 59223435 59223887 -26214593 + Tigger2a DNA MER2_type 1 434 0 344 217 12 36 chr17 59224062 59224145 -26214335 - L2 LINE L2 -4 3268 3188 282 236 31 118 chr17 59224244 59224306 -26214174 + MIR SINE MIR 139 186 -76 2336 93 3 0 chr17 59224306 59224617 -26213863 + AluSx SINE Alu 1 312 0 282 236 31 118 chr17 59224617 59224681 -26213799 + MIR SINE MIR 186 254 -8 2487 71 0 0 chr17 59225050 59225360 -26213120 - AluSg SINE Alu 0 310 1 444 309 113 26 chr17 59225414 59225725 -26212755 + L2 LINE L2 2862 3199 -73 323 223 39 68 chr17 59225749 59225852 -26212628 - MER5A DNA MER1_type -89 100 1 209 224 60 75 chr17 59225852 59225885 -26212595 + L2 LINE L2 3241 3272 0 22 88 0 0 chr17 59226338 59226395 -26212085 + GC_rich Low_complexity Low_complexity 1 57 0 444 322 201 0 chr17 59226933 59227147 -26211333 - MIR SINE MIR -4 258 2 2536 42 0 10 chr17 59227679 59227985 -26210495 - AluY SINE Alu -8 303 1 1763 121 24 45 chr17 59228365 59228655 -26209825 - AluSx SINE Alu -14 298 15 247 314 54 37 chr17 59228723 59228755 -26209725 - L1ME4a LINE L1 -119 6002 5972 2171 116 6 6 chr17 59228755 59229066 -26209414 - AluSx SINE Alu 0 312 2 247 314 54 37 chr17 59229066 59229275 -26209205 - L1ME4a LINE L1 -149 5972 5757 270 269 156 21 chr17 59229949 59230090 -26208390 + MIR SINE MIR 65 224 -38 293 264 23 0 chr17 59230426 59230513 -26207967 - MIR SINE MIR -62 146 58 569 270 47 0 chr17 59230895 59231043 -26207437 - MIR SINE MIR -59 203 49 220 312 0 22 chr17 59231176 59231270 -26207210 + MIR SINE MIR 36 126 -82 363 215 94 60 chr17 59231684 59231833 -26206647 + MIR SINE MIR 9 162 -100 1323 264 169 20 chr17 59231876 59232902 -26205578 + L2 LINE L2 2124 3313 0 300 232 18 80 chr17 59233028 59233140 -26205340 - MIR SINE MIR -69 193 89 434 271 51 28 chr17 59233712 59233889 -26204591 - MER117 DNA MER1_type -10 187 7 231 36 0 0 chr17 59234211 59234239 -26204241 + (TG)n Simple_repeat Simple_repeat 2 29 0 211 305 85 0 chr17 59234595 59234677 -26203803 + MIR SINE MIR 63 151 -57 2267 88 0 0 chr17 59234678 59234972 -26203508 + AluSg1 SINE Alu 1 294 -15 2150 110 10 0 chr17 59235253 59235554 -26202926 + AluSx SINE Alu 1 304 -8 863 289 20 24 chr17 59235908 59236161 -26202319 - MIR SINE MIR -3 259 8 323 204 0 82 chr17 59236145 59236243 -26202237 + L2 LINE L2 3179 3268 -4 * 508 274 95 61 chr17 59237032 59237328 -26201152 + L1MC4a LINE L1 5603 5908 -1900 366 23 0 0 chr17 59237352 59237395 -26201085 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 0 0 0 chr17 59237525 59237550 -26200930 + AT_rich Low_complexity Low_complexity 1 25 0 2238 106 3 3 chr17 59237623 59237935 -26200545 - AluSx SINE Alu 0 312 1 815 242 86 12 chr17 59237989 59238233 -26200247 - MIR SINE MIR 0 262 1 2124 74 67 0 chr17 59238253 59238538 -26199942 + AluY SINE Alu 1 304 -7 2136 99 0 0 chr17 59238597 59238889 -26199591 + AluSg SINE Alu 1 292 -18 191 307 40 0 chr17 59239518 59239593 -26198887 - MIR SINE MIR -167 95 18 275 300 0 0 chr17 59240340 59240420 -26198060 - MIR SINE MIR -109 99 20 290 288 56 88 chr17 59241414 59241539 -26196941 - MIR SINE MIR -23 239 119 441 324 62 6 chr17 59241782 59241958 -26196522 + MER5A DNA MER1_type 3 188 -1 646 285 13 6 chr17 59241975 59242133 -26196347 + MIR3 SINE MIR 38 196 -12 2166 97 0 52 chr17 59242756 59243086 -26195394 + AluSq SINE Alu 1 313 0 674 94 10 10 chr17 59243108 59243204 -26195276 + AluSg/x SINE Alu 198 293 -19 564 246 74 0 chr17 59243681 59243820 -26194660 - MIR SINE MIR -64 144 36 1594 162 11 7 chr17 59244544 59244816 -26193664 + AluJo SINE Alu 24 296 -16 378 0 0 0 chr17 59246114 59246156 -26192324 + (CA)n Simple_repeat Simple_repeat 2 43 0 3805 142 6 49 chr17 59246833 59247509 -26190971 + L1MB4 LINE L1 5533 6179 -1 2238 101 3 3 chr17 59247553 59247860 -26190620 + AluSq SINE Alu 1 307 -6 2149 95 24 0 chr17 59248428 59248722 -26189758 + AluSq SINE Alu 1 301 -12 936 129 0 0 chr17 59248931 59249063 -26189417 - AluSg/x SINE Alu -22 288 157 934 135 0 0 chr17 59249210 59249415 -26189065 + FLAM_C SINE Alu 1 205 0 893 190 17 0 chr17 59249812 59249986 -26188494 - MER5A DNA MER1_type 0 189 13 2168 114 0 13 chr17 59250221 59250537 -26187943 - AluSx SINE Alu 0 312 1 232 184 0 41 chr17 59250691 59250740 -26187740 - L2 LINE L2 0 3272 3226 195 217 33 17 chr17 59251270 59251330 -26187150 + MIR SINE MIR 81 141 -121 1401 159 19 70 chr17 59251565 59251776 -26186704 - AluJo SINE Alu -8 304 113 2329 88 0 7 chr17 59251776 59252082 -26186398 + AluSq SINE Alu 3 306 -7 1401 159 19 70 chr17 59252082 59252185 -26186295 - AluJo SINE Alu -199 113 6 331 309 19 101 chr17 59252594 59252901 -26185579 + L2 LINE L2 2979 3260 -12 356 258 73 24 chr17 59253634 59253758 -26184722 - MIR SINE MIR -17 245 116 211 320 238 7 chr17 59253819 59253966 -26184514 + L3b LINE CR1 1223 1403 -180 714 227 111 14 chr17 59256248 59256464 -26182016 - MIR SINE MIR -1 261 25 187 294 0 0 chr17 59256493 59256544 -26181936 - MIR SINE MIR -62 146 96 702 282 87 17 chr17 59256899 59257186 -26181294 + Charlie2 DNA MER1_type 1 307 -2555 713 251 38 0 chr17 59257328 59257511 -26180969 + Charlie2a DNA MER1_type 1474 1663 -1199 2032 125 3 0 chr17 59257577 59257881 -26180599 - AluSx SINE Alu -5 307 3 2048 112 0 13 chr17 59257894 59258197 -26180283 - AluSq SINE Alu -1 312 14 308 247 22 11 chr17 59258203 59258292 -26180188 + Charlie2 DNA MER1_type 2773 2862 0 295 321 19 28 chr17 59258418 59258524 -26179956 + MIR SINE MIR 47 151 -111 678 276 124 5 chr17 59258678 59258895 -26179585 - MIR SINE MIR -2 260 18 469 287 153 0 chr17 59258906 59259063 -26179417 + MER5A DNA MER1_type 9 189 0 250 283 0 0 chr17 59259236 59259296 -26179184 + L1ME4a LINE L1 5967 6026 -95 2011 129 0 16 chr17 59259350 59259667 -26178813 - AluSx SINE Alu 0 312 1 318 299 102 8 chr17 59259855 59259982 -26178498 + MIR3 SINE MIR 10 148 -60 2147 127 0 0 chr17 59260561 59260860 -26177620 + AluSx SINE Alu 1 299 -13 186 353 62 39 chr17 59260872 59261022 -26177458 - MIR3 SINE MIR -41 167 16 293 323 138 6 chr17 59261334 59261501 -26176979 + MIR SINE MIR 72 260 -2 197 132 26 26 chr17 59261557 59261595 -26176885 + MER5B DNA MER1_type 6 43 -135 717 185 0 0 chr17 59261596 59261715 -26176765 - AluJ SINE Alu -2 310 192 806 177 7 0 chr17 59261715 59261856 -26176624 - AluJ SINE Alu -170 142 1 251 200 0 0 chr17 59261879 59261924 -26176556 - MER5A DNA MER1_type -123 66 22 364 251 115 55 chr17 59262507 59262690 -26175790 - MIR SINE MIR -6 256 63 673 189 49 0 chr17 59262707 59262829 -26175651 - FLAM_A SINE Alu -2 131 4 2339 72 0 0 chr17 59262843 59263134 -26175346 - AluSc SINE Alu -18 291 1 808 130 0 62 chr17 59265240 59265386 -26173094 + FLAM_C SINE Alu 2 138 -5 866 259 5 5 chr17 59266552 59266757 -26171723 - MIR SINE MIR -54 208 4 2430 54 7 0 chr17 59267002 59267298 -26171182 + AluY SINE Alu 5 302 -9 773 275 12 16 chr17 59267888 59268133 -26170347 - MIR SINE MIR -2 260 17 323 246 76 34 chr17 59268133 59268251 -26170229 + MER5C DNA MER1_type 1 123 -201 238 208 19 0 chr17 59268362 59268415 -26170065 + MER5C DNA MER1_type 271 324 0 2276 78 7 10 chr17 59268525 59268833 -26169647 - AluSq SINE Alu -6 307 1 486 245 224 0 chr17 59268835 59268982 -26169498 - MER5A DNA MER1_type -6 183 4 1652 185 33 0 chr17 59269737 59270039 -26168441 + AluJb SINE Alu 1 312 0 243 250 44 0 chr17 59270108 59270176 -26168304 - L2 LINE L2 -2 3270 3200 1994 118 3 35 chr17 59270720 59271034 -26167446 + AluSx SINE Alu 1 304 -8 2304 87 3 3 chr17 59271034 59271343 -26167137 + AluY SINE Alu 1 309 -2 1973 100 0 0 chr17 59271348 59271607 -26166873 + AluSq SINE Alu 39 297 -16 885 156 183 5 chr17 59271627 59271813 -26166667 - MER20 DNA MER1_type 0 219 1 342 261 0 11 chr17 59271824 59271916 -26166564 + MER5B DNA MER1_type 4 94 -84 1400 157 15 47 chr17 59272747 59272842 -26165638 + AluJo SINE Alu 44 141 -171 2170 111 0 0 chr17 59272842 59273139 -26165341 + AluSg SINE Alu 1 297 -13 1400 157 15 47 chr17 59273139 59273317 -26165163 + AluJo SINE Alu 141 308 -4 2121 120 0 0 chr17 59273446 59273738 -26164742 - AluSx SINE Alu -20 292 1 363 23 0 0 chr17 59274109 59274153 -26164327 + (CA)n Simple_repeat Simple_repeat 2 45 0 2269 89 0 0 chr17 59275557 59275849 -26162631 - AluSc SINE Alu -17 292 1 472 248 28 0 chr17 59275948 59276057 -26162423 - MIR SINE MIR -59 203 92 2100 132 3 0 chr17 59276059 59276369 -26162111 + AluJb SINE Alu 1 311 -1 1307 194 93 7 chr17 59276379 59276657 -26161823 + AluJb SINE Alu 1 302 -10 28 29 0 0 chr17 59276697 59276732 -26161748 + AT_rich Low_complexity Low_complexity 1 35 0 217 280 118 0 chr17 59276732 59276825 -26161655 - MIR SINE MIR -154 108 5 2123 99 7 16 chr17 59277354 59277691 -26160789 - AluSp SINE Alu 0 313 1 2172 118 3 0 chr17 59277691 59277997 -26160483 - AluSx SINE Alu -5 307 1 1636 162 3 48 chr17 59278001 59278310 -26160170 - AluJo SINE Alu -17 295 1 197 320 97 31 chr17 59278781 59278928 -26159552 - MIR SINE MIR -35 173 20 21 0 0 0 chr17 59278981 59279002 -26159478 + AT_rich Low_complexity Low_complexity 1 21 0 326 172 92 35 chr17 59279109 59279196 -26159284 + MLT1J2 LTR MaLR 67 158 -292 408 231 0 11 chr17 59279296 59279387 -26159093 + MLT1I LTR MaLR 316 405 -4 238 353 49 25 chr17 59279445 59279567 -26158913 - L2 LINE L2 0 3313 3189 525 264 176 0 chr17 59280112 59280260 -26158220 + MER91A DNA MER1_type 1 174 -22 237 155 42 42 chr17 59280311 59280382 -26158098 + L1MC5 LINE L1 7865 7935 -26 334 256 160 13 chr17 59280413 59280569 -26157911 + MIR SINE MIR 82 260 -2 2267 113 0 22 chr17 59281100 59281419 -26157061 - AluSx SINE Alu 0 312 1 2636 50 0 0 chr17 59281478 59281779 -26156701 + AluY SINE Alu 2 302 -9 778 224 70 53 chr17 59282690 59282918 -26155562 + MIR SINE MIR 31 262 0 23 0 0 0 chr17 59282918 59282941 -26155539 + AT_rich Low_complexity Low_complexity 1 23 0 2543 60 3 0 chr17 59282941 59283240 -26155240 - AluSp SINE Alu -13 300 1 246 325 23 0 chr17 59283362 59283455 -26155025 - MIR SINE MIR -102 106 36 199 256 0 0 chr17 59284302 59284341 -26154139 + MIR SINE MIR 54 92 -116 680 228 81 61 chr17 59284373 59284468 -26154012 - MIR SINE MIR -6 256 164 1820 98 118 35 chr17 59284468 59284755 -26153725 + AluSx SINE Alu 1 311 -1 680 228 81 61 chr17 59284755 59284905 -26153575 - MIR SINE MIR -98 164 6 2027 152 0 13 chr17 59286247 59286562 -26151918 + AluSx SINE Alu 1 311 -1 242 222 16 32 chr17 59286859 59286922 -26151558 - L2 LINE L2 0 3313 3252 557 342 77 17 chr17 59287318 59287616 -26150864 - L3b LINE CR1 -14 1569 1254 467 276 57 97 chr17 59287878 59288157 -26150323 + L2 LINE L2 3000 3267 -5 2069 151 30 0 chr17 59288295 59288594 -26149886 - AluJb SINE Alu -4 308 1 891 221 61 48 chr17 59288607 59288838 -26149642 + MIR SINE MIR 19 252 -10 2029 139 0 7 chr17 59288888 59289183 -26149297 - AluSx SINE Alu -19 293 1 2506 78 0 0 chr17 59289192 59289499 -26148981 - AluSx SINE Alu -1 311 5 305 295 47 68 chr17 59340742 59340932 -26097548 - MIR3 SINE MIR -9 199 14 439 202 0 55 chr17 59343381 59343490 -26094990 + MIR SINE MIR 80 182 -80 2312 99 0 10 chr17 59343644 59343946 -26094534 - AluSx SINE Alu -13 299 1 2773 85 14 14 chr17 59345516 59345880 -26092600 + THE1B LTR MaLR 1 364 0 1594 148 0 4 chr17 59346489 59346726 -26091754 + AluSx SINE Alu 1 236 -76 22 70 0 0 chr17 59346761 59346804 -26091676 + AT_rich Low_complexity Low_complexity 1 43 0 2363 14 0 14 chr17 59346804 59347082 -26091398 - L1PA3 LINE L1 -5 6150 5877 32 67 0 0 chr17 59347219 59347279 -26091201 + AT_rich Low_complexity Low_complexity 1 60 0 548 235 5 59 chr17 59347289 59347476 -26091004 - MER112 DNA MER1_type -82 178 2 477 314 64 45 chr17 59347692 59347912 -26090568 - MIR SINE MIR -20 242 19 235 254 8 92 chr17 59348309 59348439 -26090041 - L2 LINE L2 -1 3271 3153 221 192 103 77 chr17 59349189 59349267 -26089213 - MIR3 SINE MIR -16 192 113 398 232 0 0 chr17 59349269 59349351 -26089129 + MER81 DNA DNA 1 82 -32 260 247 0 27 chr17 59349614 59349687 -26088793 + L1ME LINE L1 5510 5580 -541 1554 126 21 94 chr17 59349782 59349882 -26088598 + AluJo SINE Alu 27 133 -179 2231 138 0 0 chr17 59349882 59350193 -26088287 - AluSx SINE Alu 0 312 2 1554 126 21 94 chr17 59350193 59350378 -26088102 + AluJo SINE Alu 133 291 -21 1901 174 3 0 chr17 59350437 59350735 -26087745 + AluJb SINE Alu 1 299 -13 311 236 160 9 chr17 59351212 59351318 -26087162 + MIR SINE MIR 48 169 -93 807 178 7 161 chr17 59351339 59351358 -26087122 + MER21B LTR ERV1 6 26 -837 2355 109 0 0 chr17 59351358 59351660 -26086820 + AluSx SINE Alu 1 302 -10 807 178 7 161 chr17 59351660 59351926 -26086554 + MER21B LTR ERV1 26 247 -616 806 217 233 32 chr17 59352011 59352325 -26086155 + MER21B LTR ERV1 412 788 -75 319 225 62 12 chr17 59352325 59352405 -26086075 - MIR SINE MIR -39 223 140 1229 286 49 24 chr17 59352511 59353063 -26085417 + L2 LINE L2 501 1066 -2248 947 227 37 105 chr17 59353125 59353526 -26084954 - MLT1B LTR MaLR -16 374 1 1977 224 77 16 chr17 59353526 59354021 -26084459 + MLT1F1 LTR MaLR 36 560 -7 3674 256 55 38 chr17 59354026 59355215 -26083265 + L2 LINE L2 1067 2276 -1038 859 273 79 6 chr17 59356061 59356473 -26082007 - LTR33 LTR ERVL -53 468 1 2170 97 37 20 chr17 59356768 59356929 -26081551 - AluSx SINE Alu -7 305 135 1989 133 49 0 chr17 59356929 59357214 -26081266 - AluSc SINE Alu -10 299 1 2170 97 37 20 chr17 59357214 59357352 -26081128 - AluSx SINE Alu -177 135 1 207 270 81 54 chr17 59357902 59358013 -26080467 - MIR3 SINE MIR -83 125 12 340 246 121 67 chr17 59358479 59358719 -26079761 + MLT1L LTR MaLR 363 615 0 435 241 66 51 chr17 59359695 59359832 -26078648 - MER5B DNA MER1_type -7 171 33 347 310 49 42 chr17 59359711 59359853 -26078627 + MER5A DNA MER1_type 36 178 -11 * 1749 161 16 30 chr17 59359913 59360217 -26078263 + AluJo SINE Alu 1 300 -12 182 125 0 25 chr17 59360826 59360866 -26077614 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 188 206 44 73 chr17 59360945 59361013 -26077467 - MIR SINE MIR -89 173 108 215 279 225 18 chr17 59362451 59362562 -26075918 + MIR SINE MIR 64 197 -65 782 310 26 4 chr17 59362569 59362801 -26075679 - MIR SINE MIR -10 252 16 252 286 0 0 chr17 59362831 59362887 -26075593 + MIR SINE MIR 206 261 -1 2249 107 0 7 chr17 59363397 59363697 -26074783 - AluSc SINE Alu -11 298 1 937 224 0 0 chr17 59364300 59364461 -26074019 + FAM SINE Alu 1 161 -14 1649 168 17 38 chr17 59364722 59365013 -26073467 + AluJo SINE Alu 12 296 -16 376 299 63 23 chr17 59366011 59366185 -26072295 - MIR3 SINE MIR -25 183 3 778 218 0 0 chr17 59366820 59366953 -26071527 + FLAM_A SINE Alu 1 133 0 250 195 0 0 chr17 59367217 59367258 -26071222 - L2 LINE L2 -11 3302 3262 324 267 78 33 chr17 59367299 59367389 -26071091 - MIR SINE MIR -167 95 2 243 356 102 0 chr17 59367513 59367631 -26070849 + L2 LINE L2 3143 3272 0 398 318 32 24 chr17 59368724 59368850 -26069630 - MIR3 SINE MIR -69 139 13 570 303 80 69 chr17 59369415 59370003 -26068477 - L2 LINE L2 0 3272 2674 1137 140 68 84 chr17 59370012 59370245 -26068235 - MER33 DNA MER1_type -2269 316 88 2590 54 0 3 chr17 59370245 59370543 -26067937 - AluY SINE Alu -14 297 1 1137 140 68 84 chr17 59370543 59370630 -26067850 - MER33 DNA MER1_type -2497 88 1 286 257 11 134 chr17 59370726 59370913 -26067567 - L2 LINE L2 -836 2478 2315 469 222 217 26 chr17 59370942 59371297 -26067183 + MLT1J LTR MaLR 64 511 0 1082 277 24 15 chr17 59371298 59371637 -26066843 - L2 LINE L2 -996 2318 1977 279 311 63 79 chr17 59371732 59372230 -26066250 + L2 LINE L2 2717 3271 -1 7720 180 36 58 chr17 59372443 59372661 -26065819 + L1MB7 LINE L1 3163 3384 -2800 2452 88 47 3 chr17 59372661 59373003 -26065477 + L1PA14 LINE L1 5805 6161 0 7720 180 36 58 chr17 59373003 59373338 -26065142 + L1MB7 LINE L1 3384 3725 -2459 2006 106 44 0 chr17 59373338 59373638 -26064842 + AluSq SINE Alu 1 312 0 7720 180 36 58 chr17 59373638 59373794 -26064686 + L1MB7 LINE L1 3725 3883 -2301 1490 201 45 32 chr17 59373794 59374102 -26064378 + AluJb SINE Alu 1 312 0 7720 180 36 58 chr17 59374102 59374511 -26063969 + L1MB7 LINE L1 3883 4300 -1884 6743 48 7 116 chr17 59374511 59375581 -26062899 - SVA Other Other -1 1385 433 7720 180 36 58 chr17 59375581 59375649 -26062831 + L1MB7 LINE L1 4300 4368 -1816 6186 73 24 5 chr17 59375649 59376493 -26061987 - SVA Other Other -520 866 7 7720 180 36 58 chr17 59376493 59378386 -26060094 + L1MB7 LINE L1 4368 6172 -12 267 31 0 0 chr17 59378390 59378422 -26060058 + (TG)n Simple_repeat Simple_repeat 2 33 0 1614 174 8 0 chr17 59378484 59378748 -26059732 - AluSx SINE Alu -9 303 38 441 244 165 12 chr17 59379672 59379836 -26058644 - MIR3 SINE MIR 0 208 20 2314 105 0 0 chr17 59379897 59380192 -26058288 - AluSg SINE Alu -15 295 1 208 325 215 19 chr17 59380758 59381494 -26056986 - L2 LINE L2 -16 3256 2364 555 307 109 5 chr17 59381501 59381703 -26056777 - MIR SINE MIR -4 258 36 246 298 193 6 chr17 59381755 59381916 -26056564 - L2 LINE L2 -1046 2268 2078 607 291 52 12 chr17 59382300 59382551 -26055929 + MIR SINE MIR 2 262 0 189 0 0 0 chr17 59382606 59382627 -26055853 + (CA)n Simple_repeat Simple_repeat 2 22 0 628 353 26 0 chr17 59382814 59383004 -26055476 - MER91A DNA MER1_type -1 195 1 254 288 12 12 chr17 59383731 59383811 -26054669 + MIR3 SINE MIR 110 189 -19 230 231 0 0 chr17 59384442 59384494 -26053986 + C-rich Low_complexity Low_complexity 3 54 0 201 271 19 19 chr17 59384519 59384626 -26053854 + (CGGGG)n Simple_repeat Simple_repeat 5 111 0 217 156 22 0 chr17 59384580 59384625 -26053855 + G-rich Low_complexity Low_complexity 2 47 0 180 0 0 0 chr17 59384701 59384721 -26053759 + (CGGG)n Simple_repeat Simple_repeat 4 23 0 22 80 0 0 chr17 59385385 59385435 -26053045 + GC_rich Low_complexity Low_complexity 1 50 0 574 214 17 8 chr17 59387480 59387644 -26050836 - MER58B DNA MER1_type 0 341 17 267 334 84 24 chr17 59387681 59387847 -26050633 - MIR SINE MIR -67 195 16 330 184 55 8 chr17 59387931 59388013 -26050467 - MIR SINE MIR -56 152 71 213 39 0 0 chr17 59388668 59388694 -26049786 + (TG)n Simple_repeat Simple_repeat 2 27 0 196 316 53 0 chr17 59389404 59389480 -26049000 - MIR3 SINE MIR -23 185 106 252 167 0 0 chr17 59391458 59391506 -26046974 + (TG)n Simple_repeat Simple_repeat 1 48 0 403 266 55 50 chr17 59393804 59394003 -26044477 - LTR33 LTR ERVL -319 202 3 626 254 125 38 chr17 59394105 59394393 -26044087 + L2 LINE L2 2996 3308 -5 508 289 85 10 chr17 59395371 59395572 -26042908 + MIR SINE MIR 1 216 -46 185 278 97 14 chr17 59395719 59395791 -26042689 - MIR SINE MIR -101 107 30 2674 154 44 0 chr17 59395886 59396341 -26042139 - L1MB7 LINE L1 -61 6123 5649 918 188 61 33 chr17 59396390 59396603 -26041877 - MER58A DNA MER1_type -4 220 2 1557 185 80 60 chr17 59397035 59397466 -26041014 - MLT2C1 LTR ERVL 0 464 1 7464 173 78 36 chr17 59397466 59398996 -26039484 - ERVL-C1 LTR ERVL -8 5756 4163 2795 153 60 88 chr17 59398996 59399541 -26038939 - L1ME1 LINE L1 -228 6007 5448 1659 198 3 3 chr17 59399541 59399829 -26038651 + AluJb SINE Alu 1 288 -24 2795 153 60 88 chr17 59399829 59399841 -26038639 - L1ME1 LINE L1 -787 5448 5437 1982 90 35 0 chr17 59399841 59400130 -26038350 - L1MA5A LINE L1 0 6297 5999 2795 153 60 88 chr17 59400130 59400601 -26037879 - L1ME1 LINE L1 -798 5437 5012 1392 170 44 41 chr17 59400624 59400918 -26037562 - AluJo SINE Alu -14 298 4 225 191 0 0 chr17 59401136 59401178 -26037302 + MLT1E3 LTR MaLR 570 611 -13 1616 192 21 0 chr17 59401271 59401557 -26036923 - AluJb SINE Alu -13 299 8 239 280 27 0 chr17 59401894 59401969 -26036511 + CT-rich Low_complexity Low_complexity 4 80 0 2651 199 65 52 chr17 59401970 59402819 -26035661 - L1ME1 LINE L1 -1198 5017 4158 1344 190 41 51 chr17 59402849 59403239 -26035241 - MLT1A1 LTR MaLR -12 374 14 225 94 0 0 chr17 59403270 59403302 -26035178 - L1ME1 LINE L1 -2086 4129 4098 848 151 0 0 chr17 59403302 59403421 -26035059 - FLAM_C SINE Alu -13 120 2 601 107 0 0 chr17 59403425 59403509 -26034971 - AluY SINE Alu -11 300 217 5572 220 76 28 chr17 59403530 59404572 -26033908 - L1ME1 LINE L1 -2136 4079 3088 2250 99 0 40 chr17 59404572 59404895 -26033585 - AluSg SINE Alu 0 310 1 5572 220 76 28 chr17 59404895 59405309 -26033171 - L1ME1 LINE L1 -3127 3088 2695 2402 98 0 3 chr17 59405309 59405616 -26032864 - AluSg SINE Alu -4 306 1 5572 220 76 28 chr17 59405616 59406073 -26032407 - L1ME1 LINE L1 -3520 2695 2123 462 219 0 0 chr17 59406078 59406160 -26032320 - Tigger5 DNA MER2_type 0 2323 2242 436 192 13 0 chr17 59406150 59406228 -26032252 + Tigger5 DNA MER2_type 2242 2320 -3 * 490 190 0 0 chr17 59406228 59406306 -26032174 - Tigger5 DNA MER2_type -2245 78 1 513 191 40 24 chr17 59406309 59406435 -26032045 - L1ME1 LINE L1 -4283 2113 1986 471 219 0 0 chr17 59406446 59406528 -26031952 - Tigger3(Golem) DNA MER2_type -2946 83 2 6634 118 45 14 chr17 59406575 59407212 -26031268 + Tigger3b DNA MER2_type 99 786 -2242 1967 158 10 3 chr17 59407212 59407515 -26030965 + AluJb SINE Alu 1 305 -7 6634 118 45 14 chr17 59407515 59407976 -26030504 + Tigger3b DNA MER2_type 786 1231 0 1195 291 21 39 chr17 59407987 59408098 -26030382 - L1ME1 LINE L1 -4442 1954 1843 2435 86 7 0 chr17 59408098 59408399 -26030081 - AluSg SINE Alu -7 303 1 1195 291 21 39 chr17 59408399 59408802 -26029678 - L1ME1 LINE L1 -4553 1843 1449 902 226 63 25 chr17 59408834 59409201 -26029279 - L1ME1 LINE L1 -5063 1333 953 450 246 105 50 chr17 59409218 59409485 -26028995 + L1MC4a LINE L1 5683 5969 -152 1115 260 4 4 chr17 59409509 59409751 -26028729 + MLT1F LTR MaLR 3 244 -298 618 194 8 0 chr17 59409772 59409896 -26028584 - MER53 DNA DNA -63 126 2 1146 164 89 79 chr17 59409901 59410008 -26028472 + MLT1F LTR MaLR 260 364 -178 2322 112 0 6 chr17 59410008 59410322 -26028158 - AluSx SINE Alu 0 312 1 1895 173 0 7 chr17 59410327 59410622 -26027858 - AluJo SINE Alu -19 293 1 1146 164 89 79 chr17 59410622 59410788 -26027692 + MLT1F LTR MaLR 367 542 0 477 0 0 0 chr17 59410888 59410941 -26027539 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 529 128 35 139 chr17 59410990 59411162 -26027318 + L1MB7 LINE L1 5744 5897 -287 530 144 0 22 chr17 59411164 59411254 -26027226 + MLT1F LTR MaLR 454 541 -1 2241 89 0 3 chr17 59412475 59412757 -26025723 - AluSx SINE Alu -31 281 1 224 156 0 22 chr17 59413060 59413105 -26025375 + MIR SINE MIR 117 160 -102 2239 119 3 0 chr17 59413475 59413785 -26024695 - AluSx SINE Alu -1 311 1 2308 110 0 3 chr17 59413787 59414097 -26024383 - AluSx SINE Alu -1 311 3 509 113 0 0 chr17 59414119 59414199 -26024281 - L1MA8 LINE L1 -2 6289 6210 208 216 0 0 chr17 59414543 59414580 -26023900 + (CGTG)n Simple_repeat Simple_repeat 2 38 0 279 292 50 31 chr17 59414673 59414834 -26023646 - MIR3 SINE MIR -23 185 22 287 243 7 100 chr17 59415035 59415175 -26023305 + MIR SINE MIR 130 256 -6 2082 218 140 13 chr17 59415187 59415796 -26022684 - L1ME1 LINE L1 -5660 736 51 1082 212 175 48 chr17 59415827 59416261 -26022219 - MLT1H LTR MaLR -48 501 13 551 231 32 6 chr17 59416289 59416445 -26022035 - MIR SINE MIR -76 186 27 327 256 65 7 chr17 59417546 59417703 -26020777 + MLT1I LTR MaLR 1 192 -217 240 208 21 0 chr17 59417796 59417844 -26020636 + MLT1I LTR MaLR 353 401 -8 424 240 160 7 chr17 59418075 59418225 -26020255 + MIR SINE MIR 39 211 -51 802 148 14 19 chr17 59418663 59418967 -26019513 + (ATGGTG)n Simple_repeat Simple_repeat 1 302 0 371 238 148 29 chr17 59418999 59419209 -26019271 + MIR SINE MIR 12 246 -16 409 289 123 11 chr17 59419234 59419421 -26019059 - MIR SINE MIR -26 236 29 332 262 112 10 chr17 59419427 59419722 -26018758 + L1MC4a LINE L1 5683 5832 -326 2258 110 0 0 chr17 59419773 59420064 -26018416 - AluSg SINE Alu -19 291 1 900 245 171 35 chr17 59420154 59420587 -26017893 + L2 LINE L2 2822 3313 0 204 186 0 23 chr17 59420690 59420733 -26017747 - L2 LINE L2 -79 3234 3193 208 174 0 22 chr17 59421359 59421405 -26017075 + L2 LINE L2 3265 3309 -4 196 146 0 0 chr17 59421443 59421484 -26016996 - L2 LINE L2 -1 3312 3272 227 203 42 25 chr17 59422085 59422203 -26016277 + (TTATA)n Simple_repeat Simple_repeat 4 123 0 258 210 136 0 chr17 59422207 59422288 -26016192 - HAL1b LINE L1 -10 1338 1247 2416 83 0 0 chr17 59422298 59422588 -26015892 + AluSg SINE Alu 1 290 -20 1445 171 143 48 chr17 59422593 59422865 -26015615 - HsTC2 DNA Tc2 -1 1897 1652 417 20 0 0 chr17 59422865 59422915 -26015565 + (TG)n Simple_repeat Simple_repeat 1 50 0 1445 171 143 48 chr17 59422915 59422980 -26015500 - HsTC2 DNA Tc2 -246 1652 1595 2191 83 10 3 chr17 59422980 59423268 -26015212 + AluSq SINE Alu 17 306 -7 1445 171 143 48 chr17 59423268 59423363 -26015117 - HsTC2 DNA Tc2 -303 1595 1247 383 177 168 53 chr17 59423360 59423473 -26015007 - HsTC2 DNA Tc2 -1766 132 7 * 1519 199 34 85 chr17 59423483 59424011 -26014469 - HAL1b LINE L1 -118 1230 730 2358 82 0 16 chr17 59424050 59424354 -26014126 - AluSp SINE Alu -14 299 1 287 247 72 10 chr17 59424391 59424488 -26013992 - HAL1 LINE L1 -4 2503 2401 332 263 15 38 chr17 59424572 59424705 -26013775 - HAL1 LINE L1 -229 2278 2149 258 217 167 61 chr17 59424705 59424903 -26013577 - MER97c DNA MER1_type? 0 1090 872 3184 193 54 46 chr17 59425334 59425446 -26013034 - MER97b DNA MER1_type? -200 853 743 2312 73 36 3 chr17 59425446 59425747 -26012733 + AluY SINE Alu 1 311 0 3184 193 54 46 chr17 59425747 59425778 -26012702 - MER97b DNA MER1_type? -310 743 714 2078 107 21 24 chr17 59425778 59426069 -26012411 + AluSq SINE Alu 1 290 -23 3184 193 54 46 chr17 59426069 59426770 -26011710 - MER97b DNA MER1_type? -339 714 1 1414 264 56 40 chr17 59426771 59427289 -26011191 - HAL1 LINE L1 -352 2155 1630 1634 156 48 31 chr17 59427365 59427654 -26010826 - AluJb SINE Alu -18 294 1 2366 199 108 26 chr17 59427656 59428269 -26010211 - L1MD2 LINE L1 -227 6132 5470 1745 132 43 25 chr17 59428288 59428589 -26009891 - AluSx SINE Alu 0 306 1 2014 143 0 0 chr17 59428626 59428913 -26009567 - AluSx SINE Alu -19 293 7 502 108 0 14 chr17 59428921 59428995 -26009485 + MSTA LTR MaLR 356 428 0 441 200 12 11 chr17 59428995 59429100 -26009380 - L1M4 LINE L1 -1977 4169 4064 673 122 27 20 chr17 59429204 59429352 -26009128 + CT-rich Low_complexity Low_complexity 4 152 0 914 192 0 0 chr17 59429354 59429500 -26008980 - FRAM SINE Alu -31 145 1 1404 263 125 44 chr17 59429500 59430325 -26008155 - HAL1 LINE L1 -955 1552 661 412 228 33 102 chr17 59430702 59430917 -26007563 + MLT1L LTR MaLR 195 394 -221 485 95 0 0 chr17 59431368 59431431 -26007049 + Alu SINE Alu 2 64 -246 15667 29 4 1 chr17 59431867 59434464 -26004016 + L1PA4 LINE L1 3553 6155 0 372 337 89 43 chr17 59434479 59434782 -26003698 + L2 LINE L2 2907 3223 -49 449 317 6 12 chr17 59435362 59435523 -26002957 + MIR3 SINE MIR 45 204 -4 2208 110 3 20 chr17 59435852 59436152 -26002328 - AluSx SINE Alu -17 295 1 2480 159 16 19 chr17 59436209 59436636 -26001844 - MSTB LTR MaLR 0 426 1 737 185 8 15 chr17 59436680 59436796 -26001684 + AluJ SINE Alu 1 117 -185 252 0 0 0 chr17 59436796 59436824 -26001656 + (CA)n Simple_repeat Simple_repeat 2 29 0 737 185 8 15 chr17 59436824 59436837 -26001643 + AluJ SINE Alu 117 129 -173 633 154 18 18 chr17 59436837 59436947 -26001533 + AluJ SINE Alu 183 292 -20 1480 199 8 0 chr17 59437329 59437590 -26000890 - AluJo SINE Alu -49 263 1 1191 240 53 29 chr17 59437591 59438112 -26000368 - L1ME LINE L1 -5099 1297 774 569 168 11 0 chr17 59438667 59438762 -25999718 - MLT1A1 LTR MaLR 0 365 270 305 143 20 0 chr17 59438797 59438846 -25999634 - MLT1A1 LTR MaLR -181 184 135 1210 152 94 61 chr17 59438848 59439184 -25999296 + MLT1A1 LTR MaLR 2 426 -2 778 203 0 0 chr17 59439186 59439324 -25999156 - MLT1A1 LTR MaLR -227 138 1 734 183 0 15 chr17 59439506 59439637 -25998843 + FLAM_A SINE Alu 2 130 -3 198 324 0 122 chr17 59440162 59440247 -25998233 - MIR3 SINE MIR -49 159 98 2073 148 0 3 chr17 59440247 59440557 -25997923 - AluSx SINE Alu -3 309 1 198 324 0 122 chr17 59440557 59440619 -25997861 - MIR3 SINE MIR -110 98 30 258 32 0 0 chr17 59440625 59440656 -25997824 + (TTG)n Simple_repeat Simple_repeat 2 32 0 475 233 41 48 chr17 59440656 59440754 -25997726 - L1MD1 LINE L1 -6 6236 6138 2468 149 23 28 chr17 59440754 59441183 -25997297 - MSTC LTR MaLR 0 428 2 475 233 41 48 chr17 59441183 59441230 -25997250 - L1MD1 LINE L1 -104 6138 6092 658 295 49 40 chr17 59441310 59441471 -25997009 + HAL1b LINE L1 275 433 -915 1793 139 9 62 chr17 59441471 59441795 -25996685 - AluJo SINE Alu -5 307 1 658 295 49 40 chr17 59441795 59442003 -25996477 + HAL1b LINE L1 433 647 -701 443 313 72 5 chr17 59442004 59442199 -25996281 + HAL1b LINE L1 671 878 -470 22 0 0 0 chr17 59442358 59442380 -25996100 + AT_rich Low_complexity Low_complexity 1 22 0 945 234 74 16 chr17 59442542 59442854 -25995626 + L1M4 LINE L1 2506 2835 -3311 283 240 0 13 chr17 59442884 59442959 -25995521 + L1M4 LINE L1 87 160 -6382 319 84 0 70 chr17 59442966 59443037 -25995443 + (TCTCCC)n Simple_repeat Simple_repeat 5 70 0 10251 28 0 199 chr17 59443038 59444765 -25993715 + SVA Other Other 1 1384 -2 28 29 0 0 chr17 59444765 59444800 -25993680 + AT_rich Low_complexity Low_complexity 1 35 0 5673 227 78 40 chr17 59444822 59445657 -25992823 + L1M4 LINE L1 446 1248 -5396 1693 190 13 22 chr17 59445657 59445968 -25992512 + AluJo SINE Alu 1 308 -4 5673 227 78 40 chr17 59445968 59448537 -25989943 + L1M4 LINE L1 1248 4232 -2412 2777 166 22 55 chr17 59448575 59449176 -25989304 + L1MB7 LINE L1 5581 6161 -23 746 252 12 62 chr17 59451048 59451306 -25987174 + MIR SINE MIR 8 252 -10 276 280 0 20 chr17 59451306 59451406 -25987074 + (CTA)n Simple_repeat Simple_repeat 1 98 0 345 169 41 128 chr17 59452222 59452394 -25986086 - L1ME4a LINE L1 -39 6082 5926 2633 75 9 0 chr17 59452494 59452839 -25985641 - L1PA11 LINE L1 -1 6173 5826 718 307 100 12 chr17 59452928 59453267 -25985213 - L1ME4a LINE L1 -269 5852 5484 1178 123 6 0 chr17 59453384 59453547 -25984933 - AluSq SINE Alu -149 164 1 247 262 10 48 chr17 59453765 59453868 -25984612 - L1MC5 LINE L1 -157 7804 7706 1641 186 3 3 chr17 59453896 59454191 -25984289 + AluJo SINE Alu 1 295 -17 1531 185 60 4 chr17 59455082 59455363 -25983117 - AluJo SINE Alu -13 299 3 870 151 0 22 chr17 59455364 59455503 -25982977 - AluJo SINE Alu -176 136 1 180 0 0 0 chr17 59455510 59455530 -25982950 + (T)n Simple_repeat Simple_repeat 1 20 0 393 228 76 65 chr17 59457436 59457490 -25980990 - MIR SINE MIR -11 251 199 2334 89 7 0 chr17 59457490 59457792 -25980688 - AluSx SINE Alu -8 304 1 393 228 76 65 chr17 59457792 59457968 -25980512 - MIR SINE MIR -63 199 32 30 27 0 0 chr17 59459296 59459333 -25979147 + AT_rich Low_complexity Low_complexity 1 37 0 1383 209 10 101 chr17 59460481 59460878 -25977602 + MLT1A1 LTR MaLR 5 365 0 252 257 67 29 chr17 59461030 59461135 -25977345 + L2 LINE L2 3165 3273 -40 2555 62 0 34 chr17 59461369 59461691 -25976789 + AluSq SINE Alu 3 313 0 462 315 55 4 chr17 59461844 59462082 -25976398 - L3 LINE CR1 -242 1335 1086 487 281 61 32 chr17 59462147 59462521 -25975959 - MLT1L LTR MaLR 0 615 197 245 153 153 17 chr17 59462551 59462610 -25975870 - MLT1L LTR MaLR -547 68 2 761 255 25 92 chr17 59462918 59463176 -25975304 + HAL1 LINE L1 717 942 -1565 951 119 40 34 chr17 59463176 59463282 -25975198 - L1MD1 LINE L1 0 6242 6133 2133 164 19 3 chr17 59463282 59463641 -25974839 + MLT1A1 LTR MaLR 1 365 0 951 119 40 34 chr17 59463641 59463711 -25974769 - L1MD1 LINE L1 -109 6133 6065 761 255 25 92 chr17 59463711 59463844 -25974636 + HAL1 LINE L1 942 1082 -1425 977 243 127 15 chr17 59463847 59464115 -25974365 + MLT1G1 LTR MaLR 3 300 -295 968 299 66 23 chr17 59464121 59464639 -25973841 - HAL1b LINE L1 -695 653 114 330 67 0 0 chr17 59465213 59465258 -25973222 + (TG)n Simple_repeat Simple_repeat 2 46 0 365 0 22 0 chr17 59466009 59466054 -25972426 + (GA)n Simple_repeat Simple_repeat 1 46 0 1629 169 67 18 chr17 59466055 59466386 -25972094 - MLT2C1 LTR ERVL -50 347 1 698 213 19 0 chr17 59467452 59467607 -25970873 + MER5A DNA MER1_type 4 161 -28 2110 58 61 14 chr17 59468976 59469269 -25969211 + AluY SINE Alu 1 307 -4 2123 115 10 13 chr17 59469438 59469751 -25968729 - AluSx SINE Alu 0 312 1 521 303 37 28 chr17 59470432 59470650 -25967830 - MIR SINE MIR -32 230 11 198 348 27 36 chr17 59472197 59472309 -25966171 + MIR SINE MIR 20 130 -132 374 242 223 5 chr17 59472768 59472979 -25965501 - L1ME3A LINE L1 -208 5962 5706 417 175 88 0 chr17 59473004 59473084 -25965396 - AluSp SINE Alu -133 180 94 773 214 12 12 chr17 59473090 59473263 -25965217 - L1MCc LINE L1 -4953 1886 1714 3552 192 65 3 chr17 59473272 59473933 -25964547 + L1M3f LINE L1 2 703 -4625 1611 141 128 0 chr17 59473935 59474239 -25964241 + L1M3f LINE L1 738 1080 -4248 * 2767 257 102 56 chr17 59474237 59474266 -25964214 - L1MCc LINE L1 -5112 1727 1701 2216 115 7 0 chr17 59474266 59474561 -25963919 - AluSg SINE Alu -13 297 1 2767 257 102 56 chr17 59474561 59475106 -25963374 - L1MCc LINE L1 -5138 1701 1183 2954 118 7 19 chr17 59475106 59475539 -25962941 + MSTA LTR MaLR 1 428 0 2767 257 102 56 chr17 59475539 59476330 -25962150 - L1MCc LINE L1 -5656 1183 298 673 263 94 23 chr17 59476758 59477100 -25961380 - HAL1 LINE L1 -1351 1156 791 1144 174 0 0 chr17 59477128 59477295 -25961185 - AluJb SINE Alu -14 298 132 728 226 50 6 chr17 59477471 59477652 -25960828 - MER5A DNA MER1_type 0 189 1 374 174 229 0 chr17 59477898 59478007 -25960473 + MER97a DNA MER1_type? 45 178 -716 2509 77 0 0 chr17 59479016 59479313 -25959167 + AluSp SINE Alu 1 297 -16 2204 113 3 0 chr17 59479498 59479791 -25958689 + AluSx SINE Alu 1 294 -18 351 0 0 0 chr17 59479875 59479914 -25958566 + (CA)n Simple_repeat Simple_repeat 2 40 0 2100 147 62 27 chr17 59480445 59480983 -25957497 + MLT2A2 LTR ERVL 2 554 0 728 206 20 25 chr17 59480987 59481191 -25957289 - L1MCc LINE L1 -6204 219 17 560 330 11 0 chr17 59481228 59481404 -25957076 - MER91A DNA MER1_type 0 196 19 234 62 0 0 chr17 59481579 59481611 -25956869 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 343 343 118 5 chr17 59481676 59481880 -25956600 + MIR SINE MIR 9 235 -27 246 304 31 37 chr17 59482011 59482172 -25956308 + LTR16B LTR ERVL 1 160 -304 981 300 66 14 chr17 59482585 59483008 -25955472 - L2 LINE L2 -35 3278 2834 1035 245 177 50 chr17 59483022 59483537 -25954943 - MLT1G LTR MaLR -8 582 3 404 329 6 25 chr17 59483555 59483716 -25954764 - L2 LINE L2 -518 2796 2639 236 233 35 23 chr17 59483709 59483795 -25954685 + MIR SINE MIR 16 102 -106 * 2407 46 4 4 chr17 59483830 59484161 -25954319 - AluY SINE Alu 0 333 3 310 275 22 22 chr17 59484229 59484320 -25954160 + L2 LINE L2 3181 3271 -1 2317 107 3 10 chr17 59485162 59485472 -25953008 + AluSx SINE Alu 1 308 -4 316 334 119 48 chr17 59487135 59487572 -25950908 - L2 LINE L2 0 3272 2805 231 326 12 23 chr17 59488420 59488506 -25949974 - L2 LINE L2 -1 3312 3228 1869 244 47 37 chr17 59489147 59490085 -25948395 + MER97a DNA MER1_type? 8 1060 -30 2035 132 4 0 chr17 59490088 59490369 -25948111 + AluSx SINE Alu 1 282 -30 453 36 0 0 chr17 59490387 59490442 -25948038 + (TG)n Simple_repeat Simple_repeat 2 56 0 204 111 56 0 chr17 59491029 59491065 -25947415 - L2 LINE L2 -9 3263 3226 207 285 138 23 chr17 59492378 59492508 -25945972 - MIR3 SINE MIR -62 146 2 195 218 76 54 chr17 59493004 59493100 -25945380 - MIR SINE MIR -79 129 33 356 279 29 29 chr17 59493434 59493538 -25944942 - L2 LINE L2 0 3272 3169 440 259 19 0 chr17 59493548 59493656 -25944824 - MIR3 SINE MIR -29 179 70 269 227 0 40 chr17 59493677 59493752 -25944728 - L2 LINE L2 -6 3307 3236 434 314 57 0 chr17 59495390 59495549 -25942931 + MIR SINE MIR 21 188 -74 226 266 31 39 chr17 59495679 59495807 -25942673 + (TCTA)n Simple_repeat Simple_repeat 2 128 0 288 210 0 0 chr17 59496917 59496998 -25941482 + (CA)n Simple_repeat Simple_repeat 2 82 0 2157 151 0 0 chr17 59497175 59497651 -25940829 - AluSx SINE Alu 0 476 1 436 283 158 0 chr17 59497852 59498004 -25940476 + MIR3 SINE MIR 30 205 -3 443 296 141 24 chr17 59498664 59498955 -25939525 - L3 LINE CR1 -72 1505 1181 2302 124 0 0 chr17 59499072 59499379 -25939101 - AluSx SINE Alu -5 307 1 543 310 35 20 chr17 59499390 59499593 -25938887 - MIR SINE MIR -56 206 1 203 299 23 0 chr17 59500565 59500652 -25937828 + MIR SINE MIR 46 134 -74 439 310 44 13 chr17 59502150 59502338 -25936142 - MIR SINE MIR -38 224 35 2461 124 61 23 chr17 59502625 59503068 -25935412 - LTR46 LTR ERV1 0 460 1 270 30 0 0 chr17 59503068 59503101 -25935379 - LTR46-int LTR ERV1 0 6985 6953 855 179 118 0 chr17 59503619 59503865 -25934615 - L1MB7 LINE L1 0 6184 5910 210 143 0 0 chr17 59503923 59503958 -25934522 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 2963 6 0 0 chr17 59504894 59505205 -25933275 + AluYa5 SINE Alu 1 311 0 340 279 188 46 chr17 59505228 59505425 -25933055 + MIR SINE MIR 32 256 -6 209 57 29 0 chr17 59506706 59506741 -25931739 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 631 206 102 18 chr17 59508630 59508812 -25929668 + MIR SINE MIR 38 236 -26 4564 69 8 32 chr17 59509905 59510496 -25927984 - SVA Other Other 0 1386 810 1921 291 101 21 chr17 59510529 59511841 -25926639 - L2 LINE L2 -2 3311 1848 1858 168 0 10 chr17 59512811 59513109 -25925371 - AluJo SINE Alu -17 295 1 29 0 0 0 chr17 59513220 59513249 -25925231 + AT_rich Low_complexity Low_complexity 1 29 0 831 260 66 9 chr17 59513824 59514051 -25924429 + MIR SINE MIR 23 262 0 397 335 68 6 chr17 59514487 59514663 -25923817 + MIR3 SINE MIR 5 191 -17 38 0 0 0 chr17 59515838 59515876 -25922604 + AT_rich Low_complexity Low_complexity 1 38 0 1018 163 47 0 chr17 59516502 59516674 -25921806 - FRAM SINE Alu -3 173 1 187 347 107 0 chr17 59516705 59516826 -25921654 - L2 LINE L2 -2 3270 3137 301 288 72 16 chr17 59517635 59517760 -25920720 - MIR3 SINE MIR -8 200 69 337 214 0 0 chr17 59517785 59517855 -25920625 + L1ME LINE L1 5529 5598 -523 2082 133 3 14 chr17 59518238 59518532 -25919948 - AluSx SINE Alu -21 291 1 1727 188 26 16 chr17 59518770 59519079 -25919401 + AluJo SINE Alu 1 312 0 2672 42 0 0 chr17 59519410 59519721 -25918759 + AluY SINE Alu 1 311 0 220 297 184 22 chr17 59521406 59521591 -25916889 - MIR SINE MIR -1 261 47 2873 3 0 0 chr17 59521695 59521995 -25916485 - AluYa5 SINE Alu -11 300 1 946 174 13 4 chr17 59522320 59522554 -25915926 - L1MB3 LINE L1 -51 6132 5823 5434 85 0 0 chr17 59522554 59523304 -25915176 - L1PA8 LINE L1 -4 6168 5419 742 226 44 0 chr17 59523477 59523636 -25914844 + AluJb SINE Alu 65 230 -82 1532 207 110 4 chr17 59523639 59524112 -25914368 + L1MC4 LINE L1 4177 4699 -1447 2166 113 0 0 chr17 59524112 59524395 -25914085 + AluSc SINE Alu 17 299 -10 4745 221 61 38 chr17 59524395 59526165 -25912315 + L1MC4 LINE L1 4818 6546 400 327 49 0 0 chr17 59526165 59526206 -25912274 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2300 114 3 0 chr17 59526209 59526517 -25911963 + AluSx SINE Alu 1 309 -3 4745 221 61 38 chr17 59526517 59526563 -25911917 + L1MC4 LINE L1 6547 5227 -919 477 0 0 0 chr17 59526563 59526616 -25911864 + (TA)n Simple_repeat Simple_repeat 2 54 0 4745 221 61 38 chr17 59526616 59526799 -25911681 + L1MC4 LINE L1 5226 5403 -743 382 275 191 0 chr17 59526814 59526945 -25911535 - LTR16A1 LTR ERVL -301 156 1 417 226 96 34 chr17 59527866 59528012 -25910468 - L2 LINE L2 -61 3252 3098 1347 146 128 35 chr17 59528016 59528334 -25910146 + MSTC LTR MaLR 1 416 -8 443 340 5 31 chr17 59528342 59528361 -25910119 - L2 LINE L2 -215 3098 3080 1855 154 26 32 chr17 59528361 59528673 -25909807 + AluJo SINE Alu 1 310 -2 443 340 5 31 chr17 59528673 59528844 -25909636 - L2 LINE L2 -233 3080 2913 3400 178 71 24 chr17 59528864 59529741 -25908739 - LTR28 LTR ERV1 0 1020 1 189 139 0 76 chr17 59530262 59530341 -25908139 + (TTTG)n Simple_repeat Simple_repeat 2 74 0 331 256 35 12 chr17 59530705 59530791 -25907689 + MLT1L LTR MaLR 193 280 -335 607 116 22 51 chr17 59530976 59531114 -25907366 + L1MB2 LINE L1 6038 6171 0 463 243 250 0 chr17 59531410 59531546 -25906934 - MER5A DNA MER1_type -9 180 11 2165 89 44 0 chr17 59531761 59532054 -25906426 + AluSg SINE Alu 1 306 -4 438 295 33 0 chr17 59532180 59532302 -25906178 + L3 LINE CR1 1360 1485 -92 394 307 160 0 chr17 59532300 59532450 -25906030 - MER5A DNA MER1_type -12 177 4 * 301 333 47 35 chr17 59532498 59532669 -25905811 + MER5A DNA MER1_type 17 189 0 374 314 72 10 chr17 59534212 59534406 -25904074 - MIR SINE MIR -44 218 13 25 0 0 0 chr17 59534523 59534548 -25903932 + AT_rich Low_complexity Low_complexity 1 25 0 691 188 25 30 chr17 59534590 59534792 -25903688 + L1MC3 LINE L1 7585 7785 0 766 128 0 0 chr17 59535205 59535307 -25903173 + AluSg/x SINE Alu 184 338 0 365 19 38 0 chr17 59535307 59535360 -25903120 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 362 348 24 48 chr17 59535824 59536031 -25902449 - MIR3 SINE MIR -5 203 2 1815 148 46 0 chr17 59536779 59537062 -25901418 + AluJb SINE Alu 1 296 -16 213 132 0 0 chr17 59537744 59537782 -25900698 + (TG)n Simple_repeat Simple_repeat 2 39 0 1769 136 0 0 chr17 59538930 59539196 -25899284 - AluSx SINE Alu 0 305 40 297 248 94 26 chr17 59539246 59539363 -25899117 - MIR3 SINE MIR -34 174 50 276 56 481 0 chr17 59539551 59539605 -25898875 - MADE1 DNA Mariner 0 80 1 180 318 55 36 chr17 59540018 59540128 -25898352 - L3 LINE CR1 -1150 427 316 224 299 0 143 chr17 59541956 59542103 -25896377 + MIR3 SINE MIR 32 157 -51 502 206 95 85 chr17 59542132 59542321 -25896159 - MIR SINE MIR -52 210 20 1134 197 0 5 chr17 59543380 59543593 -25894887 - AluJb SINE Alu -8 304 93 825 131 33 0 chr17 59543615 59543737 -25894743 + FLAM_C SINE Alu 1 126 -7 512 260 31 63 chr17 59544255 59544478 -25894002 + L2 LINE L2 3094 3309 -4 2215 136 0 3 chr17 59545908 59546218 -25892262 + AluSx SINE Alu 1 309 -3 212 244 167 0 chr17 59546835 59546913 -25891567 - MIR3 SINE MIR -5 203 113 615 27 0 0 chr17 59547514 59547587 -25890893 + (TTTC)n Simple_repeat Simple_repeat 4 76 0 802 176 15 15 chr17 59547619 59547755 -25890725 - FRAM SINE Alu -40 136 1 2644 58 0 0 chr17 59547913 59548222 -25890258 + AluY SINE Alu 3 311 0 295 255 143 0 chr17 59548882 59548980 -25889500 + MIR3 SINE MIR 96 207 -1 185 348 0 54 chr17 59549102 59549194 -25889286 - MIR SINE MIR -105 103 17 328 300 27 18 chr17 59552629 59552739 -25885741 + MIR SINE MIR 47 157 -105 2346 101 0 0 chr17 59553348 59553644 -25884836 + AluSg SINE Alu 1 296 -14 21 0 0 0 chr17 59554812 59554833 -25883647 + AT_rich Low_complexity Low_complexity 1 21 0 3483 68 16 0 chr17 59555162 59555600 -25882880 - LTR56 LTR ERV1 0 445 1 2309 100 0 7 chr17 59555608 59555909 -25882571 - AluSq SINE Alu -14 299 1 2512 45 0 7 chr17 59559223 59559515 -25878965 - AluY SINE Alu -21 290 1 2219 150 100 18 chr17 59559650 59559870 -25878610 - Tigger2a DNA MER2_type -2274 434 234 2109 127 3 0 chr17 59559870 59560162 -25878318 - AluSq SINE Alu -20 293 1 2219 150 100 18 chr17 59560162 59560342 -25878138 - Tigger2a DNA MER2_type -2474 234 1 228 269 65 43 chr17 59562175 59562268 -25876212 - L2 LINE L2 -21 3251 3157 221 257 0 71 chr17 59563778 59563848 -25874632 - MER5A DNA MER1_type 0 189 125 * 326 332 146 32 chr17 59563821 59564198 -25874282 + L2 LINE L2 2255 2674 -640 2285 89 0 32 chr17 59565605 59565919 -25872561 - AluSx SINE Alu -8 304 1 211 228 35 18 chr17 59566232 59566289 -25872191 - L2 LINE L2 -3 3310 3253 945 117 0 51 chr17 59566335 59566472 -25872008 + FLAM_C SINE Alu 1 130 -3 265 279 132 89 chr17 59566753 59566843 -25871637 - MIR SINE MIR -18 244 159 2224 100 10 3 chr17 59566843 59567142 -25871338 - AluSg SINE Alu -9 301 1 265 279 132 89 chr17 59567142 59567163 -25871317 - MIR SINE MIR -103 159 140 1660 193 27 10 chr17 59567163 59567463 -25871017 - AluJo SINE Alu -7 305 1 265 279 132 89 chr17 59567463 59567540 -25870940 - MIR SINE MIR -122 140 47 221 342 103 38 chr17 59567591 59567775 -25870705 - L2 LINE L2 -510 2804 2609 212 303 156 60 chr17 59567809 59568245 -25870235 - L2 LINE L2 -845 2469 1992 2143 85 46 23 chr17 59569370 59569675 -25868805 + AluSp SINE Alu 1 312 -1 1688 171 0 40 chr17 59569685 59570007 -25868473 + AluJo SINE Alu 1 309 -3 276 258 186 10 chr17 59570951 59571048 -25867432 - L2 LINE L2 -8 3264 3151 21 0 0 0 chr17 59574722 59574743 -25863737 + AT_rich Low_complexity Low_complexity 1 21 0 1964 121 4 0 chr17 59574748 59575045 -25863435 + AluJb SINE Alu 18 315 0 508 289 154 0 chr17 59576010 59576211 -25862269 - MIR SINE MIR 0 262 31 22 0 0 0 chr17 59576897 59576919 -25861561 + AT_rich Low_complexity Low_complexity 1 22 0 227 208 0 0 chr17 59577706 59577754 -25860726 - L2 LINE L2 -4 3309 3262 974 325 76 50 chr17 59577855 59578597 -25859883 - L2 LINE L2 -387 2927 2162 2333 104 0 0 chr17 59578597 59578896 -25859584 + AluSg SINE Alu 1 299 -11 974 325 76 50 chr17 59578896 59578946 -25859534 - L2 LINE L2 -1152 2162 2115 991 199 5 0 chr17 59579101 59579287 -25859193 + MIR SINE MIR 65 251 -11 2137 102 0 3 chr17 59579467 59579762 -25858718 + L1MA2 LINE L1 6010 6303 -1 281 308 128 65 chr17 59580327 59580726 -25857754 + L2 LINE L2 2826 3249 -23 551 284 81 63 chr17 59582783 59582925 -25855555 + MER102b DNA MER1_type 3 141 -1287 2546 70 0 0 chr17 59582925 59583227 -25855253 + AluY SINE Alu 6 307 -4 551 284 81 63 chr17 59583227 59583369 -25855111 + MER102b DNA MER1_type 141 292 -49 547 322 24 24 chr17 59583434 59583639 -25854841 - MIR SINE MIR -22 240 36 348 64 0 0 chr17 59584175 59584222 -25854258 + (TG)n Simple_repeat Simple_repeat 1 47 0 1297 113 0 0 chr17 59584547 59584724 -25853756 - AluSg/x SINE Alu -2 310 134 2299 87 3 10 chr17 59584724 59585022 -25853458 - AluSx SINE Alu -16 296 1 680 253 41 53 chr17 59585174 59585419 -25853061 + MIR SINE MIR 21 262 0 211 238 36 71 chr17 59585613 59585697 -25852783 + L2 LINE L2 2554 2634 -680 616 266 73 16 chr17 59585769 59585961 -25852519 + MIR SINE MIR 12 214 -48 2186 96 3 42 chr17 59585983 59586295 -25852185 + AluSg SINE Alu 1 300 -10 1172 111 0 0 chr17 59586295 59586455 -25852025 + AluSg/x SINE Alu 132 285 -25 22 56 0 0 chr17 59586449 59586485 -25851995 + AT_rich Low_complexity Low_complexity 1 36 0 * 880 240 32 18 chr17 59586477 59586698 -25851782 - MIR SINE MIR 0 262 39 213 363 66 0 chr17 59589355 59589446 -25849034 + L2 LINE L2 3164 3260 -12 202 327 0 0 chr17 59590090 59590142 -25848338 - MIR3 SINE MIR -14 194 143 * 377 319 126 0 chr17 59590109 59590244 -25848236 + MIR3 SINE MIR 35 186 -22 734 243 12 78 chr17 59590914 59591169 -25847311 - L2 LINE L2 0 3313 3076 1000 94 148 0 chr17 59591170 59591350 -25847130 - AluSg/x SINE Alu 0 314 113 2372 247 77 11 chr17 59591355 59592111 -25846369 - L2 LINE L2 -233 3080 2275 385 284 98 27 chr17 59592692 59592875 -25845605 - MIR SINE MIR -7 255 60 226 303 15 15 chr17 59593238 59593304 -25845176 + MER91A DNA MER1_type 1 66 -130 2366 87 3 0 chr17 59593331 59593642 -25844838 - AluSp SINE Alu 0 313 2 2209 58 3 27 chr17 59593654 59593972 -25844508 - AluY SINE Alu 0 311 1 419 254 35 35 chr17 59594095 59594209 -25844271 + MER91B DNA MER1_type 77 190 0 2278 113 0 0 chr17 59596094 59596403 -25842077 + AluSx SINE Alu 1 309 -3 191 325 12 50 chr17 59597070 59597150 -25841330 - L2 LINE L2 -23 3249 3173 186 400 12 0 chr17 59597264 59597344 -25841136 + L2 LINE L2 2448 2528 -786 218 322 43 82 chr17 59597570 59597778 -25840702 + L2 LINE L2 2730 2929 -385 269 186 258 21 chr17 59599900 59599997 -25838483 + MIR SINE MIR 87 206 -56 26 0 0 0 chr17 59600849 59600875 -25837605 + GC_rich Low_complexity Low_complexity 1 26 0 806 174 97 7 chr17 59602013 59602168 -25836312 - FRAM SINE Alu -7 169 1 662 183 26 13 chr17 59602204 59602357 -25836123 + MER33 DNA MER1_type 9 163 -161 2181 112 3 3 chr17 59602430 59602734 -25835746 - AluSq SINE Alu -9 304 1 2236 68 4 0 chr17 59602746 59603056 -25835424 - AluSg SINE Alu 0 311 1 1655 82 82 13 chr17 59603056 59603287 -25835193 - AluSq SINE Alu -65 248 1 3457 172 87 13 chr17 59603288 59603748 -25834732 - L1MB3 LINE L1 -49 6134 5709 1343 209 248 0 chr17 59603748 59604083 -25834397 - MER47B DNA MER2_type 0 418 1 3457 172 87 13 chr17 59604083 59604442 -25834038 - L1MB3 LINE L1 -474 5709 5255 180 211 0 88 chr17 59604958 59605015 -25833465 + L2 LINE L2 3262 3313 0 258 268 0 37 chr17 59605126 59605208 -25833272 - MIR SINE MIR -6 256 178 635 248 131 10 chr17 59606102 59606308 -25832172 - MIR SINE MIR 0 262 32 803 116 0 31 chr17 59606309 59606438 -25832042 - FLAM_A SINE Alu 0 142 18 1859 148 27 7 chr17 59606548 59606845 -25831635 - AluJo SINE Alu -9 303 1 1803 147 27 7 chr17 59609781 59610074 -25828406 + AluJb SINE Alu 2 300 -12 346 248 72 32 chr17 59610075 59610200 -25828280 - MIR SINE MIR -36 226 97 2107 100 0 4 chr17 59610200 59610481 -25827999 + AluSg SINE Alu 1 280 -30 258 245 78 0 chr17 59611150 59611252 -25827228 + L1ME3A LINE L1 5947 6056 -114 307 138 15 15 chr17 59611252 59611317 -25827163 + CT-rich Low_complexity Low_complexity 3 67 0 1989 147 3 10 chr17 59611319 59611633 -25826847 - AluJb SINE Alu 0 312 1 272 212 152 10 chr17 59611638 59611737 -25826743 + L1ME3A LINE L1 6053 6165 -5 1975 142 3 10 chr17 59611743 59612046 -25826434 + AluJb SINE Alu 1 301 -11 1313 197 78 41 chr17 59612272 59612567 -25825913 - AluJo SINE Alu -6 306 1 201 154 0 0 chr17 59612619 59612658 -25825822 + T-rich Low_complexity Low_complexity 2 40 0 829 167 16 0 chr17 59612664 59612790 -25825690 - FLAM_A SINE Alu -5 128 1 258 300 100 0 chr17 59613181 59613261 -25825219 - MIR3 SINE MIR -10 198 111 300 325 100 0 chr17 59614519 59614639 -25823841 - MIR SINE MIR -45 217 86 342 284 34 0 chr17 59615550 59615638 -25822842 + MIR SINE MIR 102 192 -70 317 349 30 60 chr17 59616082 59616248 -25822232 - MIR3 SINE MIR -43 165 5 285 239 11 45 chr17 59619129 59619217 -25819263 - MIR SINE MIR -105 103 19 180 0 0 0 chr17 59620635 59620655 -25817825 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 21 0 0 0 chr17 59620667 59620688 -25817792 + GC_rich Low_complexity Low_complexity 1 21 0 230 278 0 0 chr17 59621746 59621800 -25816680 + G-rich Low_complexity Low_complexity 1 54 0 227 225 12 25 chr17 59623051 59623131 -25815349 + (CATATA)n Simple_repeat Simple_repeat 4 82 0 225 275 53 30 chr17 59624048 59624179 -25814301 + (TCTCTG)n Simple_repeat Simple_repeat 5 138 0 190 0 67 0 chr17 59624432 59624462 -25814018 + (GGA)n Simple_repeat Simple_repeat 1 32 0 213 282 7 21 chr17 59624769 59624911 -25813569 + (CA)n Simple_repeat Simple_repeat 1 140 0 195 296 37 0 chr17 59628031 59628085 -25810395 + MIR SINE MIR 204 259 -3 23 68 0 0 chr17 59628792 59628836 -25809644 + GC_rich Low_complexity Low_complexity 1 44 0 191 295 124 9 chr17 59630718 59630823 -25807657 + MIR3 SINE MIR 77 193 -15 1372 294 141 27 chr17 59631030 59631690 -25806790 - L2 LINE L2 0 3313 2730 2262 103 0 0 chr17 59631690 59631990 -25806490 + AluSx SINE Alu 1 300 -12 1372 294 141 27 chr17 59631990 59632444 -25806036 - L2 LINE L2 -583 2730 2019 358 290 14 22 chr17 59632542 59632680 -25805800 + CT-rich Low_complexity Low_complexity 2 138 0 274 307 20 20 chr17 59634245 59634346 -25804134 - MIR SINE MIR -67 141 41 488 329 72 13 chr17 59634476 59634713 -25803767 + MIR SINE MIR 2 252 -10 554 274 147 11 chr17 59635372 59635562 -25802918 + MIR SINE MIR 47 262 0 1848 161 3 0 chr17 59636051 59636372 -25802108 - AluJo SINE Alu 0 312 2 349 184 0 0 chr17 59636321 59636390 -25802090 - Alu SINE Alu -250 52 2 555 16 0 0 chr17 59637333 59637397 -25801083 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 1589 196 140 31 chr17 59638565 59639014 -25799466 - MLT1D LTR MaLR -7 498 1 1911 159 17 0 chr17 59639661 59639957 -25798523 - AluJb SINE Alu -11 301 1 314 268 114 16 chr17 59640009 59640132 -25798348 - L1MC5 LINE L1 -23 7938 7804 385 251 196 10 chr17 59640204 59640352 -25798128 + MER5A DNA MER1_type 7 189 0 224 231 0 0 chr17 59641916 59641968 -25796512 + MIR SINE MIR 179 230 -32 306 73 0 0 chr17 59643211 59643252 -25795228 + (GGA)n Simple_repeat Simple_repeat 3 43 0 291 93 0 0 chr17 59644014 59644057 -25794423 + (GGA)n Simple_repeat Simple_repeat 1 43 0 970 247 30 0 chr17 59645757 59645988 -25792492 + MIR SINE MIR 3 240 -22 1160 133 12 0 chr17 59649475 59649640 -25788840 + AluJb SINE Alu 134 300 -12 190 214 122 61 chr17 59650560 59650658 -25787822 - MIR3 SINE MIR -94 114 11 347 282 68 37 chr17 59651150 59651313 -25787167 - MIR3 SINE MIR 0 208 41 428 302 38 43 chr17 59653059 59653479 -25785001 + L1MEd LINE L1 837 1254 -4865 1925 180 3 6 chr17 59653663 59653974 -25784506 - AluJo SINE Alu -2 310 1 275 296 20 0 chr17 59654048 59654146 -25784334 + L1 LINE L1 3848 3947 -2199 1800 152 7 7 chr17 59654186 59654476 -25784004 - MER70B LTR ERVL -288 290 1 5425 210 55 40 chr17 59654486 59655261 -25783219 - L1M3d LINE L1 -1803 4737 3975 2432 98 0 3 chr17 59655261 59655566 -25782914 - AluSx SINE Alu -8 304 1 5425 210 55 40 chr17 59655566 59656183 -25782297 - L1M3d LINE L1 -2565 3975 3309 2208 113 3 0 chr17 59656183 59656488 -25781992 - AluSx SINE Alu 0 306 1 5425 210 55 40 chr17 59656488 59656838 -25781642 - L1M3d LINE L1 -3231 3309 2966 2443 88 0 0 chr17 59656933 59657230 -25781250 - AluSg SINE Alu -13 297 1 312 321 37 27 chr17 59657552 59657739 -25780741 + MIR3 SINE MIR 14 202 -6 1307 157 0 37 chr17 59658548 59658764 -25779716 + AluJo SINE Alu 1 208 -104 2562 222 97 50 chr17 59658804 59659164 -25779316 - L1M3d LINE L1 -3570 2970 2628 2151 136 0 3 chr17 59659164 59659459 -25779021 + AluSx SINE Alu 1 294 -18 2562 222 97 50 chr17 59659459 59660585 -25777895 - L1M3d LINE L1 -3912 2628 1488 298 294 27 48 chr17 59661058 59661204 -25777276 - L1ME LINE L1 -5921 149 7 2172 226 30 56 chr17 59661211 59661885 -25776595 - L1M4 LINE L1 -1536 4610 3955 2025 129 0 64 chr17 59661886 59662103 -25776377 - AluSx SINE Alu -1 311 120 2341 89 0 7 chr17 59662103 59662396 -25776084 + AluSp SINE Alu 6 296 -17 2025 129 0 64 chr17 59662396 59662504 -25775976 - AluSx SINE Alu -192 120 7 312 354 5 36 chr17 59662638 59662830 -25775650 - L1ME4a LINE L1 0 6121 5936 475 309 122 39 chr17 59662991 59663378 -25775102 - L1MC4a LINE L1 -410 5754 5428 2309 97 0 3 chr17 59663597 59663887 -25774593 - AluSg SINE Alu -21 289 1 2201 128 0 0 chr17 59663918 59664214 -25774266 + AluSg SINE Alu 1 296 -14 921 192 6 12 chr17 59664367 59664539 -25773941 + FAM SINE Alu 1 171 -4 2477 79 3 0 chr17 59664545 59664850 -25773630 + AluY SINE Alu 6 311 0 338 287 90 0 chr17 59664944 59665066 -25773414 + L1ME4a LINE L1 4383 4515 -1631 576 162 90 0 chr17 59665078 59665189 -25773291 + L2 LINE L2 3193 3313 0 590 311 63 46 chr17 59665191 59666062 -25772418 + L1ME4a LINE L1 4518 5403 -743 1732 168 7 37 chr17 59666169 59666466 -25772014 - AluJo SINE Alu -22 290 3 2340 109 0 3 chr17 59666473 59666776 -25771704 - AluSx SINE Alu -8 304 3 2272 132 0 0 chr17 59666778 59667081 -25771399 - AluSx SINE Alu -9 303 1 2270 79 0 24 chr17 59667175 59667513 -25770967 - AluSq SINE Alu 0 331 1 725 85 78 64 chr17 59667636 59667777 -25770703 + FRAM SINE Alu 34 176 0 581 315 88 20 chr17 59669242 59669547 -25768933 + L2 LINE L2 2943 3268 -4 425 239 80 43 chr17 59669632 59669795 -25768685 + MIR3 SINE MIR 21 189 -19 805 292 71 20 chr17 59669827 59670276 -25768204 + L1ME4a LINE L1 5486 5957 -164 2128 86 52 14 chr17 59670708 59670998 -25767482 + AluSg SINE Alu 1 301 -9 1309 63 111 210 chr17 59671833 59672167 -25766313 + AluSq SINE Alu 1 301 -2 268 257 18 18 chr17 59674764 59674873 -25763607 + GA-rich Low_complexity Low_complexity 2 110 0 823 207 56 15 chr17 59675835 59676033 -25762447 - MER3 DNA MER1_type -3 206 1 2180 129 0 3 chr17 59676166 59676461 -25762019 - AluSg SINE Alu -16 294 1 629 255 7 0 chr17 59676978 59677127 -25761353 + MER117 DNA MER1_type 30 179 -18 340 268 14 28 chr17 59677788 59677902 -25760578 + MIR SINE MIR 65 181 -27 23 0 0 0 chr17 59678101 59678124 -25760356 + AT_rich Low_complexity Low_complexity 1 23 0 2509 72 3 0 chr17 59678125 59678431 -25760049 + AluY SINE Alu 1 307 -4 1982 167 0 0 chr17 59678439 59678750 -25759730 - AluJb SINE Alu -1 311 1 396 40 0 0 chr17 59678890 59678940 -25759540 + (CA)n Simple_repeat Simple_repeat 2 51 0 411 234 18 27 chr17 59679314 59679425 -25759055 - MIR SINE MIR -89 173 64 507 279 76 13 chr17 59680845 59681003 -25757477 - MIR SINE MIR -89 173 6 281 211 35 0 chr17 59682014 59682071 -25756409 - MER91A DNA MER1_type -12 184 126 566 248 38 0 chr17 59682913 59683046 -25755434 + MIR SINE MIR 2 139 -123 280 230 14 40 chr17 59683096 59683170 -25755310 - L2 LINE L2 -18 3254 3183 242 303 15 0 chr17 59683697 59683763 -25754717 - L2 LINE L2 -1 3271 3205 290 313 18 0 chr17 59684193 59684305 -25754175 - MIR SINE MIR -62 146 33 302 284 71 35 chr17 59684849 59684990 -25753490 - L2 LINE L2 -1 3312 3167 557 221 30 8 chr17 59686167 59686298 -25752182 - MIR SINE MIR -93 169 36 1847 145 23 20 chr17 59686532 59686835 -25751645 + AluJo SINE Alu 1 304 -8 2033 154 0 10 chr17 59687403 59687714 -25750766 + AluJb SINE Alu 1 308 -4 855 264 28 9 chr17 59688038 59688250 -25750230 - MIR SINE MIR 0 262 47 460 305 113 0 chr17 59688671 59688848 -25749632 - MER117 DNA MER1_type 0 197 1 23 0 0 0 chr17 59689099 59689122 -25749358 + AT_rich Low_complexity Low_complexity 1 23 0 5736 201 55 75 chr17 59689320 59689539 -25748941 + L1MA1 LINE L1 673 895 -5667 1852 147 7 3 chr17 59689539 59689831 -25748649 - AluSx SINE Alu -19 293 1 5736 201 55 75 chr17 59689831 59690595 -25747885 + L1MA1 LINE L1 895 1673 -4889 2033 102 0 11 chr17 59690595 59690911 -25747569 + AluSx SINE Alu 1 313 0 5736 201 55 75 chr17 59690911 59693175 -25745305 + L1MA1 LINE L1 1673 3982 -2580 2076 78 26 0 chr17 59693175 59693471 -25745009 + AluSc SINE Alu 1 303 0 5736 201 55 75 chr17 59693471 59696045 -25742435 + L1MA1 LINE L1 3982 6311 -251 252 120 0 23 chr17 59696054 59696278 -25742202 + AluSq SINE Alu 1 285 -17 1580 95 7 62 chr17 59696278 59696441 -25742039 + L1MA1 LINE L1 6305 6449 -113 2152 90 0 45 chr17 59696441 59696753 -25741727 - AluSc SINE Alu -10 299 2 1580 95 7 62 chr17 59696753 59696862 -25741618 + L1MA1 LINE L1 6449 6562 0 252 120 0 23 chr17 59696862 59696880 -25741600 + AluSq SINE Alu 285 302 0 2989 222 48 29 chr17 59696883 59697609 -25740871 + L1MD2 LINE L1 5599 6338 -21 21 57 0 0 chr17 59697812 59697847 -25740633 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr17 59698566 59698590 -25739890 + GC_rich Low_complexity Low_complexity 1 24 0 510 206 0 56 chr17 59698646 59698753 -25739727 + MIR SINE MIR 49 149 -113 586 35 24 0 chr17 59699094 59699179 -25739301 + (TCTA)n Simple_repeat Simple_repeat 2 88 0 1684 153 0 4 chr17 59699184 59699459 -25739021 - AluJo SINE Alu -38 274 1 896 222 85 97 chr17 59699785 59700235 -25738245 + L1ME4a LINE L1 5588 6033 -88 2297 81 0 7 chr17 59700235 59700545 -25737935 - AluSc SINE Alu 0 309 2 896 222 85 97 chr17 59700545 59700612 -25737868 + L1ME4a LINE L1 6033 6099 -22 669 267 91 23 chr17 59701456 59701677 -25736803 - MIR SINE MIR -13 249 14 2223 104 0 0 chr17 59701979 59702287 -25736193 - AluSx SINE Alu 0 312 5 244 241 74 0 chr17 59702289 59702343 -25736137 - MER5A DNA MER1_type -111 78 21 352 322 105 7 chr17 59702367 59702519 -25735961 + L2 LINE L2 3106 3272 0 425 305 13 61 chr17 59702973 59703158 -25735322 - MIR SINE MIR -63 145 13 426 211 83 0 chr17 59704347 59704480 -25734000 - MIR SINE MIR -49 213 70 264 333 29 0 chr17 59705402 59705504 -25732976 + MIR3 SINE MIR 89 193 -15 1303 133 25 0 chr17 59705920 59706123 -25732357 - MER3 DNA MER1_type 0 209 2 604 211 70 7 chr17 59706262 59706404 -25732076 + MIR SINE MIR 24 174 -88 470 294 134 5 chr17 59706819 59707175 -25731305 + L2 LINE L2 2553 3010 -262 726 273 64 4 chr17 59708578 59708845 -25729635 + LTR16A1 LTR ERVL 163 445 -12 378 0 0 0 chr17 59709155 59709197 -25729283 + (TG)n Simple_repeat Simple_repeat 2 43 0 1878 198 79 9 chr17 59709782 59710212 -25728268 + MLT1C LTR MaLR 1 460 -7 182 256 23 23 chr17 59710448 59710491 -25727989 - L2 LINE L2 -23 3290 3248 377 348 55 11 chr17 59710514 59710695 -25727785 + MIR3 SINE MIR 10 198 -10 1970 113 72 0 chr17 59711877 59712169 -25726311 + AluSq SINE Alu 1 313 0 1010 156 11 5 chr17 59712193 59712379 -25726101 - L1MB2 LINE L1 -16 6155 5969 655 297 151 17 chr17 59713004 59713354 -25725126 + L2 LINE L2 2875 3271 -1 564 229 170 0 chr17 59713426 59713579 -25724901 - MER5A DNA MER1_type -7 182 4 324 265 152 0 chr17 59714182 59714314 -25724166 + MIR3 SINE MIR 54 205 -3 312 215 63 0 chr17 59765368 59765447 -25673033 + MIR SINE MIR 50 133 -75 300 65 0 0 chr17 59765959 59766005 -25672475 - Alu SINE Alu 0 300 255 326 68 96 0 chr17 59766121 59766194 -25672286 - L1MCa LINE L1 -4039 2387 2308 2161 131 30 0 chr17 59766221 59766519 -25671961 - AluSc SINE Alu -2 307 1 2196 113 0 19 chr17 59766523 59766842 -25671638 - AluSq SINE Alu 0 313 1 620 208 8 0 chr17 59766851 59766976 -25671504 - FLAM_A SINE Alu -7 126 1 658 139 52 0 chr17 59766977 59767092 -25671388 - L1MC/D LINE L1 -586 5758 5638 406 95 0 0 chr17 59767094 59767157 -25671323 + AluSp/q SINE Alu 244 306 -7 1250 119 0 0 chr17 59767161 59767321 -25671159 + AluSx SINE Alu 1 160 -152 702 173 30 0 chr17 59767422 59767555 -25670925 + MLT1A1 LTR MaLR 229 365 0 247 186 0 0 chr17 59767625 59767668 -25670812 - MIR3 SINE MIR -54 154 112 389 261 166 51 chr17 59768003 59768256 -25670224 + LTR16C LTR ERVL 204 485 -6 2050 146 0 16 chr17 59768771 59769087 -25669393 + AluJb SINE Alu 1 311 -1 2319 102 6 19 chr17 59769231 59769546 -25668934 + AluY SINE Alu 1 311 0 234 250 125 12 chr17 59769636 59769716 -25668764 - MER34B LTR ERV1 0 565 477 511 167 208 17 chr17 59769860 59769980 -25668500 - FLAM_C SINE Alu 0 143 1 2406 72 0 33 chr17 59770024 59770331 -25668149 - AluSx SINE Alu -15 297 1 2119 139 0 3 chr17 59770338 59770633 -25667847 - AluSg SINE Alu -16 294 1 1779 57 0 9 chr17 59770756 59770968 -25667512 - AluSg/x SINE Alu -2 307 98 465 34 0 0 chr17 59772123 59772182 -25666298 + (TG)n Simple_repeat Simple_repeat 2 60 0 1621 153 0 19 chr17 59772480 59772742 -25665738 + AluJb SINE Alu 2 258 -54 1759 149 17 23 chr17 59772742 59773092 -25665388 + L1MB4 LINE L1 5813 6160 -20 1206 153 12 132 chr17 59773116 59773443 -25665037 - AluJo SINE Alu -22 290 3 273 224 61 41 chr17 59773928 59774026 -25664454 + MIR SINE MIR 48 147 -61 364 270 61 18 chr17 59774569 59774732 -25663748 - L2 LINE L2 -219 3053 2884 32 43 0 0 chr17 59775460 59775506 -25662974 + AT_rich Low_complexity Low_complexity 1 46 0 335 307 39 0 chr17 59775583 59775710 -25662770 + L1MA8 LINE L1 6113 6244 -47 270 280 45 30 chr17 59776356 59776488 -25661992 + MIR SINE MIR 129 262 0 181 328 61 15 chr17 59776527 59776658 -25661822 - MIR3 SINE MIR -35 173 37 187 288 63 9 chr17 59776964 59777075 -25661405 + MIR3 SINE MIR 10 126 -82 538 286 79 6 chr17 59777458 59777636 -25660844 - L2 LINE L2 -1 3312 3122 2137 72 15 8 chr17 59777756 59778040 -25660440 + AluSx SINE Alu 19 304 0 1560 115 0 47 chr17 59778310 59778545 -25659935 - AluSg/x SINE Alu -6 304 81 219 294 132 37 chr17 59778781 59778917 -25659563 + MIR SINE MIR 1 149 -113 1629 129 0 0 chr17 59778966 59779183 -25659297 + AluSx SINE Alu 1 217 -95 241 338 55 21 chr17 59779435 59779580 -25658900 - MIR SINE MIR -65 197 48 1740 163 27 33 chr17 59779724 59779902 -25658578 - AluJo SINE Alu -10 302 125 234 0 0 0 chr17 59779902 59779928 -25658552 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1740 163 27 33 chr17 59779928 59780049 -25658431 - AluJo SINE Alu -187 125 5 384 325 62 64 chr17 59780070 59780507 -25657973 - L2 LINE L2 0 3272 2837 276 276 26 0 chr17 59780713 59780789 -25657691 + GA-rich Low_complexity Low_complexity 3 80 0 437 274 8 8 chr17 59781246 59781363 -25657117 - MIR SINE MIR -142 120 4 207 100 0 0 chr17 59781500 59781530 -25656950 + (TC)n Simple_repeat Simple_repeat 1 30 0 1634 144 21 103 chr17 59781560 59781899 -25656581 - AluJb SINE Alu -1 311 1 1122 61 0 0 chr17 59782205 59782337 -25656143 - AluSg/x SINE Alu -13 297 166 439 133 24 12 chr17 59782351 59782434 -25656046 + LTR25 LTR ERV1 25 108 -686 1349 48 30 6 chr17 59782434 59782599 -25655881 - AluSq SINE Alu -144 169 1 347 73 0 0 chr17 59782611 59782666 -25655814 - Alu SINE Alu 0 300 246 773 285 36 12 chr17 59782914 59783167 -25655313 + AluY SINE Alu 41 299 -12 236 386 30 30 chr17 59783235 59783432 -25655048 + AluYa5 SINE Alu 1 197 -104 249 290 84 9 chr17 59784421 59784528 -25653952 - MIR SINE MIR -28 234 120 2066 123 0 0 chr17 59784545 59784821 -25653659 + AluSx SINE Alu 1 276 -36 284 320 105 28 chr17 59785878 59786059 -25652421 - L2 LINE L2 -555 2759 2565 945 160 21 36 chr17 59786191 59786385 -25652095 + MER20 DNA MER1_type 29 219 0 1727 154 43 7 chr17 59786776 59787056 -25651424 - AluJb SINE Alu -17 295 6 1950 139 9 22 chr17 59787306 59787622 -25650858 + AluSx SINE Alu 1 312 0 1919 197 101 32 chr17 59788094 59788601 -25649879 + MLT1F LTR MaLR 1 542 0 294 356 17 8 chr17 59788605 59788723 -25649757 - MIR3 SINE MIR -20 188 70 210 250 83 0 chr17 59788855 59788903 -25649577 + L2 LINE L2 3207 3258 -14 270 301 54 0 chr17 59789194 59789287 -25649193 - MER94 DNA DNA -35 99 2 1889 120 48 10 chr17 59789863 59790154 -25648326 + AluSx SINE Alu 1 302 -10 307 318 78 47 chr17 59790327 59790456 -25648024 - L2 LINE L2 -22 3250 3118 968 204 0 6 chr17 59790655 59790836 -25647644 - AluJb SINE Alu 0 312 133 2324 83 17 3 chr17 59790837 59791127 -25647353 - AluSx SINE Alu -18 294 1 214 284 91 34 chr17 59791127 59791215 -25647265 - L2 LINE L2 -597 2717 2625 360 295 29 36 chr17 59792266 59792405 -25646075 - MIR3 SINE MIR -6 202 65 2223 97 31 0 chr17 59792502 59792791 -25645689 + AluSx SINE Alu 1 298 -14 671 235 34 0 chr17 59792808 59792957 -25645523 + MIR SINE MIR 97 250 -12 279 0 0 0 chr17 59793519 59793550 -25644930 + (CA)n Simple_repeat Simple_repeat 2 32 0 225 192 96 41 chr17 59793567 59793640 -25644840 - MIR SINE MIR -80 182 106 223 150 50 0 chr17 59793989 59794029 -25644451 + MER5B DNA MER1_type 7 48 -130 498 209 0 26 chr17 59794058 59794211 -25644269 + GA-rich Low_complexity Low_complexity 3 151 0 2030 80 3 38 chr17 59794339 59794626 -25643854 + AluY SINE Alu 1 277 -34 2457 102 0 3 chr17 59794665 59794979 -25643501 - AluSq SINE Alu 0 313 1 276 30 0 0 chr17 59795038 59795071 -25643409 + U2 snRNA snRNA 1 33 -155 311 197 2 0 chr17 59795086 59795157 -25643323 - L1MC/D LINE L1 -297 5824 5757 268 315 1 102 chr17 59795157 59795285 -25643195 + MER5A DNA MER1_type 45 152 -26 2322 110 0 16 chr17 59795454 59795772 -25642708 - AluSq SINE Alu 0 313 1 375 165 45 113 chr17 59796004 59796071 -25642409 + Charlie8 DNA MER1_type 38 93 -2324 2098 125 0 26 chr17 59796071 59796384 -25642096 - AluY SINE Alu -5 306 2 375 165 45 113 chr17 59796384 59796449 -25642031 + Charlie8 DNA MER1_type 93 161 -2256 2372 97 0 13 chr17 59796621 59796930 -25641550 + AluSx SINE Alu 1 305 -7 1925 135 48 0 chr17 59796937 59797226 -25641254 + AluSx SINE Alu 1 303 -9 197 269 185 76 chr17 59797486 59797605 -25640875 + MIR3 SINE MIR 40 171 -37 2279 113 3 0 chr17 59797826 59798127 -25640353 + AluSx SINE Alu 1 302 -10 836 114 38 30 chr17 59798259 59798390 -25640090 - FLAM_C SINE Alu 0 133 2 337 227 59 42 chr17 59798456 59798575 -25639905 + L1ME4a LINE L1 5963 6083 -38 2228 112 0 13 chr17 59798639 59798768 -25639712 + AluSg SINE Alu 6 135 -175 2306 112 0 0 chr17 59798768 59799073 -25639407 + AluY SINE Alu 1 305 -6 2228 112 0 13 chr17 59799073 59799246 -25639234 + AluSg SINE Alu 135 304 -6 1984 134 20 3 chr17 59799516 59799815 -25638665 + AluSg SINE Alu 1 304 -6 2477 66 0 34 chr17 59799880 59800200 -25638280 + AluY SINE Alu 1 309 -2 1675 131 0 35 chr17 59800355 59800614 -25637866 - AluSg SINE Alu -60 250 1 235 251 227 37 chr17 59800620 59800783 -25637697 - MIR SINE MIR -49 213 20 188 35 35 0 chr17 59801323 59801352 -25637128 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 837 95 0 0 chr17 59801354 59801459 -25637021 - AluSp/q SINE Alu -33 280 176 519 221 149 108 chr17 59801662 59801911 -25636569 + L2 LINE L2 3014 3272 0 422 311 107 15 chr17 59802082 59802288 -25636192 + L2 LINE L2 2228 2452 -862 245 119 0 0 chr17 59802343 59802385 -25636095 + Alu SINE Alu 258 299 -3 2317 101 0 16 chr17 59802394 59802711 -25635769 + AluSx SINE Alu 1 312 0 1259 180 12 57 chr17 59802913 59803010 -25635470 - AluJo SINE Alu -79 233 133 2244 121 0 3 chr17 59803010 59803316 -25635164 - AluSx SINE Alu -7 305 1 1259 180 12 57 chr17 59803316 59803462 -25635018 - AluJo SINE Alu -179 133 1 316 234 0 0 chr17 59804256 59804320 -25634160 + MIR SINE MIR 84 147 -115 2296 96 7 0 chr17 59804873 59805165 -25633315 - AluSx SINE Alu -18 294 1 416 276 123 29 chr17 59805255 59805498 -25632982 - MLT1J2 LTR MaLR -163 287 22 422 228 55 55 chr17 59805872 59806017 -25632463 + L2 LINE L2 3167 3311 -2 1021 121 0 0 chr17 59806226 59806358 -25632122 + AluSp SINE Alu 1 132 -181 2540 55 0 0 chr17 59806360 59806651 -25631829 + AluY SINE Alu 1 291 -20 1950 143 20 10 chr17 59807179 59807336 -25631144 - AluJb SINE Alu -16 296 133 2455 81 0 0 chr17 59807336 59807633 -25630847 - AluY SINE Alu -14 297 1 1950 143 20 10 chr17 59807633 59807768 -25630712 - AluJb SINE Alu -179 133 1 655 200 89 7 chr17 59807787 59807922 -25630558 - FRAM SINE Alu -30 146 1 340 325 20 33 chr17 59808113 59808264 -25630216 - MIR3 SINE MIR -5 203 55 2243 89 52 0 chr17 59808732 59809023 -25629457 - AluSx SINE Alu -6 306 1 682 128 0 0 chr17 59809024 59809118 -25629362 - AluSg/x SINE Alu -19 291 198 865 286 138 19 chr17 59809796 59810249 -25628231 - L2 LINE L2 -19 3294 2777 1425 108 5 15 chr17 59810358 59810553 -25627927 + AluSg/x SINE Alu 84 276 -36 306 50 0 0 chr17 59810553 59810593 -25627887 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2456 84 0 0 chr17 59810908 59811205 -25627275 + AluSx SINE Alu 1 297 -15 2346 116 0 0 chr17 59811268 59811578 -25626902 - AluSg SINE Alu 0 310 1 531 0 0 0 chr17 59811822 59811881 -25626599 + (CA)n Simple_repeat Simple_repeat 2 60 0 2267 87 7 0 chr17 59811903 59812190 -25626290 - AluY SINE Alu -16 295 7 2381 93 3 3 chr17 59812195 59812496 -25625984 - AluSx SINE Alu -11 301 1 2209 100 31 0 chr17 59812692 59812983 -25625497 - AluSc SINE Alu -9 300 1 228 231 58 0 chr17 59813052 59813104 -25625376 - MIR SINE MIR -129 133 79 1927 160 0 17 chr17 59814063 59814225 -25624255 - AluSx SINE Alu -17 295 139 2470 82 0 3 chr17 59814225 59814529 -25623951 - AluSg SINE Alu -7 303 1 1927 160 0 17 chr17 59814529 59814666 -25623814 - AluSx SINE Alu -173 139 1 778 202 0 0 chr17 59814674 59814803 -25623677 - FLAM_C SINE Alu -4 129 1 346 234 26 0 chr17 59814829 59814906 -25623574 - MIR3 SINE MIR -7 201 123 233 108 6 6 chr17 59815006 59815056 -25623424 - Alu SINE Alu -268 35 1 2326 91 0 7 chr17 59815093 59815390 -25623090 - AluSg SINE Alu -15 295 1 1474 189 51 4 chr17 59816219 59816494 -25621986 + AluSx SINE Alu 6 293 -19 675 209 128 20 chr17 59816675 59816871 -25621609 - U3 snRNA snRNA 0 217 1 771 146 41 0 chr17 59817403 59817526 -25620954 - FLAM_C SINE Alu -5 128 1 591 275 93 13 chr17 59818056 59818292 -25620188 + L2 LINE L2 2804 3058 -214 958 108 36 14 chr17 59818582 59818721 -25619759 + AluSq/x SINE Alu 1 142 -170 2375 100 0 3 chr17 59818721 59819031 -25619449 + AluSc SINE Alu 1 309 0 2170 147 0 6 chr17 59819165 59819479 -25619001 + AluSx SINE Alu 1 312 0 198 260 115 96 chr17 59819539 59819643 -25618837 + L2 LINE L2 3111 3216 -56 512 269 71 0 chr17 59819709 59819891 -25618589 + LTR40a LTR ERVL 9 203 -316 2097 86 17 47 chr17 59819922 59820223 -25618257 - AluSx SINE Alu -16 296 5 443 218 203 0 chr17 59820634 59820767 -25617713 - MIR SINE MIR -27 235 76 2126 104 52 3 chr17 59820828 59821117 -25617363 + AluSx SINE Alu 1 303 -9 2158 128 23 3 chr17 59821128 59821434 -25617046 + AluSx SINE Alu 1 312 0 3173 178 20 19 chr17 59821438 59822034 -25616446 + MER21B LTR ERV1 12 608 -255 2439 92 0 3 chr17 59822040 59822344 -25616136 - AluSg SINE Alu -7 303 1 764 207 0 0 chr17 59822411 59822551 -25615929 + FLAM_C SINE Alu 2 141 -2 948 143 25 0 chr17 59822562 59822723 -25615757 + L1PB1 LINE L1 5703 5867 -284 2245 114 0 3 chr17 59822725 59823022 -25615458 - AluSp SINE Alu -17 296 1 2576 52 0 16 chr17 59823038 59823346 -25615134 - AluY SINE Alu -7 304 2 444 284 217 27 chr17 59823451 59823750 -25614730 + L2 LINE L2 2876 3231 -82 531 202 0 0 chr17 59824487 59824581 -25613899 + AluSg/x SINE Alu 198 291 -19 1324 191 16 4 chr17 59824582 59824833 -25613647 + AluSx SINE Alu 1 254 -58 1621 182 17 3 chr17 59824996 59825292 -25613188 + AluJb SINE Alu 1 300 -12 287 301 70 49 chr17 59825322 59825372 -25613108 + L2 LINE L2 3133 3180 -133 297 0 0 0 chr17 59825372 59825405 -25613075 + (CA)n Simple_repeat Simple_repeat 1 33 0 287 301 70 49 chr17 59825405 59825497 -25612983 + L2 LINE L2 3180 3278 -35 570 221 110 28 chr17 59825506 59825651 -25612829 + MIR SINE MIR 11 167 -95 2067 124 17 0 chr17 59825698 59825989 -25612491 - AluSx SINE Alu -16 296 1 1891 70 4 0 chr17 59826369 59826599 -25611881 - AluSp SINE Alu -82 231 1 1070 133 0 21 chr17 59826600 59826788 -25611692 - L1PB1 LINE L1 -45 6106 5923 398 162 14 0 chr17 59826891 59826965 -25611515 - L1ME LINE L1 -450 5671 5597 359 211 0 0 chr17 59826966 59827042 -25611438 - AluJ/FRAM SINE Alu -1 301 226 2439 87 0 0 chr17 59827045 59827344 -25611136 - AluSc SINE Alu -10 299 1 1350 200 4 26 chr17 59827344 59827614 -25610866 + AluJb SINE Alu 27 290 -22 1287 124 50 5 chr17 59827823 59828024 -25610456 - AluSg SINE Alu -100 210 1 765 212 7 0 chr17 59828094 59828231 -25610249 - FLAM_A SINE Alu -4 138 1 341 273 40 10 chr17 59828260 59828359 -25610121 - MIR SINE MIR -58 150 49 1924 131 47 0 chr17 59828431 59828705 -25609775 + AluSx SINE Alu 1 287 -25 246 357 62 8 chr17 59828922 59829051 -25609429 - MIR3 SINE MIR -1 207 72 3745 147 8 32 chr17 59829718 59830337 -25608143 - MER6A DNA MER2_type 0 605 2 1421 152 12 76 chr17 59831264 59831592 -25606888 + AluJb SINE Alu 1 307 -5 1870 169 3 13 chr17 59833350 59833484 -25604996 + AluJo SINE Alu 1 135 -177 1934 154 10 3 chr17 59833484 59833777 -25604703 + AluJb SINE Alu 1 295 -17 1870 169 3 13 chr17 59833777 59833944 -25604536 + AluJo SINE Alu 135 299 -13 2253 113 0 0 chr17 59834051 59834352 -25604128 + AluSx SINE Alu 1 301 -11 2222 128 3 0 chr17 59834358 59834662 -25603818 + AluSg SINE Alu 1 305 -5 205 269 209 0 chr17 59834894 59834961 -25603519 - MIR3 SINE MIR -14 194 114 2351 113 0 0 chr17 59835769 59836071 -25602409 + AluSx SINE Alu 1 302 -10 1836 112 76 40 chr17 59836079 59836356 -25602124 + AluSg SINE Alu 1 287 -23 1983 118 38 50 chr17 59836515 59836855 -25601625 + MER1B DNA MER1_type 1 336 -1 354 292 70 47 chr17 59837019 59837320 -25601160 + L1MEd LINE L1 57 364 -5755 625 238 113 8 chr17 59837567 59837815 -25600665 + L1MEd LINE L1 911 1184 -4935 611 180 99 12 chr17 59837828 59838000 -25600480 - L1MA8 LINE L1 -24 6267 6081 2391 101 3 0 chr17 59838000 59838306 -25600174 - AluSx SINE Alu -5 307 1 310 342 152 17 chr17 59838490 59838937 -25599543 - L2 LINE L2 -40 3232 2719 2332 108 0 3 chr17 59839041 59839346 -25599134 - AluSx SINE Alu -7 305 2 2408 99 0 0 chr17 59839425 59839727 -25598753 - AluSx SINE Alu -9 303 2 518 309 129 0 chr17 59840116 59840317 -25598163 + MIR SINE MIR 31 257 -5 2584 131 45 7 chr17 59840458 59840877 -25597603 - MER31A LTR ERV1 -41 444 10 2382 78 0 26 chr17 59840887 59841195 -25597285 - AluSx SINE Alu -12 300 1 297 218 64 13 chr17 59841202 59841280 -25597200 + MIR SINE MIR 106 187 -75 902 185 25 6 chr17 59842100 59842262 -25596218 + U1 snRNA snRNA 1 165 0 268 189 63 74 chr17 59842317 59842412 -25596068 - Alu SINE Alu 0 301 208 1780 160 3 17 chr17 59842437 59842730 -25595750 - AluSx SINE Alu -19 293 5 2153 97 7 10 chr17 59842732 59843032 -25595448 - AluSx SINE Alu -13 299 1 1632 173 27 0 chr17 59843177 59843472 -25595008 - AluSx SINE Alu -7 305 3 30 0 0 0 chr17 59843598 59843628 -25594852 + AT_rich Low_complexity Low_complexity 1 30 0 677 128 79 123 chr17 59843924 59844127 -25594353 - ORSL DNA AcHobo -81 194 1 259 241 35 106 chr17 59844142 59844283 -25594197 + L2 LINE L2 3124 3254 -18 475 252 104 7 chr17 59844741 59844876 -25593604 - AluJb SINE Alu -28 284 137 1824 137 0 4 chr17 59845005 59845261 -25593219 + AluSx SINE Alu 1 255 -57 354 98 20 0 chr17 59845362 59845413 -25593067 - Alu SINE Alu -250 52 1 2044 124 0 26 chr17 59845703 59846010 -25592470 + AluSq SINE Alu 7 305 -8 1066 163 0 0 chr17 59846011 59846183 -25592297 + AluY SINE Alu 135 306 -5 1829 164 7 10 chr17 59846221 59846519 -25591961 + AluJb SINE Alu 1 297 -15 326 203 58 0 chr17 59846740 59846809 -25591671 - MER94 DNA DNA -33 101 29 32 16 0 33 chr17 59846939 59846970 -25591510 + AT_rich Low_complexity Low_complexity 1 31 -28 2393 111 5 49 chr17 59846970 59847138 -25591342 + L1PA14 LINE L1 5805 5979 -182 1951 116 11 4 chr17 59847138 59847406 -25591074 + AluSg SINE Alu 1 270 -40 2393 111 5 49 chr17 59847406 59847417 -25591063 + L1PA14 LINE L1 5979 5989 -172 234 0 0 0 chr17 59847417 59847443 -25591037 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2393 111 5 49 chr17 59847443 59847632 -25590848 + L1PA14 LINE L1 5989 6158 -3 32 16 0 33 chr17 59847632 59847647 -25590833 + AT_rich Low_complexity Low_complexity 31 45 -14 1714 156 3 10 chr17 59847647 59847935 -25590545 + AluSx SINE Alu 1 286 -26 32 16 0 33 chr17 59847935 59847948 -25590532 + AT_rich Low_complexity Low_complexity 45 59 0 2123 130 0 3 chr17 59848155 59848454 -25590026 + AluJo SINE Alu 1 298 -14 2249 105 3 3 chr17 59848757 59849063 -25589417 + AluSx SINE Alu 1 306 -6 2213 110 3 0 chr17 59849638 59849930 -25588550 + AluSg SINE Alu 1 293 -17 2102 111 10 3 chr17 59850338 59850627 -25587853 + AluSx SINE Alu 1 291 -21 237 204 136 53 chr17 59851367 59851499 -25586981 + L1ME LINE L1 5726 5868 -253 838 154 0 44 chr17 59851770 59851906 -25586574 + FLAM_C SINE Alu 3 132 -11 2506 60 3 3 chr17 59852095 59852395 -25586085 + AluSp SINE Alu 1 300 -13 2728 120 61 5 chr17 59852434 59852875 -25585605 + L1MB3 LINE L1 5710 6175 -8 2315 76 0 44 chr17 59853177 59853492 -25584988 + AluSg SINE Alu 1 301 -9 2198 127 3 0 chr17 59853783 59854091 -25584389 + AluSx SINE Alu 1 309 -3 2208 78 14 4 chr17 59854139 59854444 -25584036 + AluSp SINE Alu 1 308 0 2092 154 0 0 chr17 59854956 59855262 -25583218 + AluJb SINE Alu 1 306 -6 1040 235 4 21 chr17 59855396 59855639 -25582841 - AluJo SINE Alu -10 302 64 2135 122 3 0 chr17 59856178 59856474 -25582006 + AluSq SINE Alu 1 297 -16 2568 44 0 0 chr17 59856482 59856778 -25581702 + AluY SINE Alu 1 296 -15 311 139 0 0 chr17 59856820 59856863 -25581617 + 5S rRNA rRNA 1 43 -78 372 240 0 0 chr17 59856903 59857003 -25581477 + (TA)n Simple_repeat Simple_repeat 1 100 0 228 276 23 0 chr17 59857004 59857091 -25581389 - L1MC4 LINE L1 -1339 6703 6615 234 279 47 0 chr17 59857098 59857184 -25581296 - L1MC4 LINE L1 -1339 6703 6614 229 178 0 0 chr17 59857191 59857236 -25581244 - L1MC4 LINE L1 -1339 6703 6659 318 281 96 22 chr17 59857312 59857447 -25581033 + MIR SINE MIR 104 248 -14 29 28 0 0 chr17 59857458 59857494 -25580986 + AT_rich Low_complexity Low_complexity 1 36 0 2222 109 3 26 chr17 59857577 59857889 -25580591 - AluSc SINE Alu -4 305 1 541 183 193 123 chr17 59859899 59860199 -25578281 + L1ME3A LINE L1 5750 6070 -100 852 203 62 5 chr17 59861080 59861272 -25577208 - MER3 DNA MER1_type 0 209 7 2283 108 3 0 chr17 59861828 59862124 -25576356 - AluSp SINE Alu -16 297 1 1887 134 21 3 chr17 59862316 59862599 -25575881 - AluSx SINE Alu -24 288 1 299 296 37 25 chr17 59862644 59862725 -25575755 - L2 LINE L2 -45 3227 3146 1203 180 0 15 chr17 59862910 59863110 -25575370 + AluJb SINE Alu 108 304 -8 1725 162 13 26 chr17 59863294 59863596 -25574884 - AluJb SINE Alu -7 305 8 2470 64 3 0 chr17 59863610 59863905 -25574575 - AluY SINE Alu -15 296 1 2322 99 7 0 chr17 59864074 59864377 -25574103 - AluSg SINE Alu -5 305 1 830 171 0 8 chr17 59864397 59864526 -25573954 - FLAM_C SINE Alu -5 128 1 1514 153 54 44 chr17 59864674 59864969 -25573511 + AluJb SINE Alu 3 300 -12 329 243 69 104 chr17 59864970 59865143 -25573337 - L1ME4a LINE L1 -112 6009 5843 1916 123 6 57 chr17 59865928 59866244 -25572236 - AluSg SINE Alu -10 300 1 26 0 0 0 chr17 59866620 59866646 -25571834 + AT_rich Low_complexity Low_complexity 1 26 0 301 272 11 54 chr17 59866697 59866789 -25571691 + L2 LINE L2 3225 3312 -1 2127 92 56 0 chr17 59867067 59867351 -25571129 + AluSg SINE Alu 1 300 -10 896 82 0 0 chr17 59867576 59867686 -25570794 + AluSg SINE Alu 1 110 -200 276 114 45 0 chr17 59867689 59867733 -25570747 + Alu SINE Alu 245 290 -12 468 219 14 152 chr17 59867949 59868159 -25570321 - L2 LINE L2 -1 3312 3132 827 224 23 6 chr17 59868190 59868364 -25570116 + MER82 DNA MER2_type 366 542 -111 1493 224 9 26 chr17 59868372 59868721 -25569759 + MLT1A2 LTR MaLR 19 361 -13 2881 215 182 86 chr17 59868777 59868909 -25569571 + MLT1A2-int LTR MaLR 13 131 -1240 2310 84 0 10 chr17 59868909 59869207 -25569273 - AluSx SINE Alu -17 295 1 2881 215 182 86 chr17 59869207 59869986 -25568494 + MLT1A2-int LTR MaLR 131 1076 -295 2204 113 0 16 chr17 59869986 59870297 -25568183 - AluSg SINE Alu -4 306 1 2881 215 182 86 chr17 59870297 59870619 -25567861 + MLT1A2-int LTR MaLR 1076 1366 -5 685 192 103 19 chr17 59870648 59870804 -25567676 + MLT1A2 LTR MaLR 3 171 -219 1965 87 12 117 chr17 59870926 59871259 -25567221 - AluSq SINE Alu -15 298 1 912 152 0 0 chr17 59871369 59871501 -25566979 + FLAM_C SINE Alu 2 133 0 325 234 26 0 chr17 59872978 59873055 -25565425 - MER116 DNA Mariner 0 80 2 252 304 60 43 chr17 59873110 59873162 -25565318 - L2 LINE L2 0 3272 3222 2200 114 3 3 chr17 59873162 59873469 -25565011 - AluSp SINE Alu -6 307 1 252 304 60 43 chr17 59873469 59873600 -25564880 - L2 LINE L2 -50 3222 3086 371 288 54 9 chr17 59873633 59873744 -25564736 + L2 LINE L2 3155 3270 -2 253 301 97 0 chr17 59873803 59873906 -25564574 - MIR3 SINE MIR -8 200 88 571 208 30 83 chr17 59873951 59874072 -25564408 - MER97a DNA MER1_type? -715 179 68 2254 118 0 3 chr17 59874072 59874385 -25564095 - AluSx SINE Alu 0 312 1 571 208 30 83 chr17 59874385 59874431 -25564049 - MER97a DNA MER1_type? -826 68 21 831 177 55 6 chr17 59874587 59874751 -25563729 - AluJb SINE Alu -57 255 84 894 133 7 21 chr17 59874756 59874899 -25563581 - FLAM_C SINE Alu -2 141 1 1753 180 31 0 chr17 59874929 59875218 -25563262 + AluJo SINE Alu 1 298 -14 2352 90 0 10 chr17 59875298 59875599 -25562881 - AluSg SINE Alu -12 298 1 1069 250 44 47 chr17 59875626 59876155 -25562325 - MLT1H1 LTR MaLR -7 548 3 259 291 118 0 chr17 59876697 59876807 -25561673 - MIR SINE MIR -12 250 128 2007 131 7 7 chr17 59876853 59877151 -25561329 + AluSx SINE Alu 5 302 -10 2384 93 0 0 chr17 59877369 59877671 -25560809 + AluSc SINE Alu 1 302 -7 487 251 11 0 chr17 59878439 59878614 -25559866 + (TA)n Simple_repeat Simple_repeat 1 177 0 1575 98 0 0 chr17 59878663 59878868 -25559612 + AluSq SINE Alu 1 205 -108 2478 67 0 0 chr17 59878868 59879167 -25559313 + AluY SINE Alu 1 299 -12 708 149 0 18 chr17 59879167 59879281 -25559199 + AluSg/x SINE Alu 193 304 -5 28 48 0 0 chr17 59879317 59879359 -25559121 + AT_rich Low_complexity Low_complexity 1 42 0 2348 102 0 16 chr17 59879412 59879726 -25558754 - AluSq SINE Alu -4 309 1 2169 116 3 6 chr17 59879956 59880267 -25558213 - AluSp SINE Alu -3 310 1 543 169 0 0 chr17 59880649 59880732 -25557748 + AluJ/FLAM SINE Alu 2 84 -228 1149 132 54 10 chr17 59880832 59881036 -25557444 - MER31B LTR ERV1 -45 421 209 1397 122 4 55 chr17 59881043 59881280 -25557200 + AluSg/x SINE Alu 81 305 -5 560 206 171 21 chr17 59881280 59881462 -25557018 - MER31A LTR ERV1 -249 217 1 582 141 0 0 chr17 59881488 59881566 -25556914 + AluJ/FLAM SINE Alu 2 79 -233 234 0 0 0 chr17 59881582 59881608 -25556872 + (A)n Simple_repeat Simple_repeat 1 26 0 1190 159 45 53 chr17 59881621 59881866 -25556614 - AluJo SINE Alu -69 243 1 21 0 0 0 chr17 59882056 59882077 -25556403 + AT_rich Low_complexity Low_complexity 1 21 0 1076 58 44 0 chr17 59882520 59882657 -25555823 - L1PA5 LINE L1 -17 6137 5995 870 200 0 0 chr17 59882676 59882826 -25555654 - FRAM SINE Alu -26 150 1 2134 125 0 13 chr17 59882833 59883136 -25555344 - AluSx SINE Alu -13 299 1 1312 176 5 5 chr17 59883333 59883554 -25554926 + AluJb SINE Alu 86 306 -6 1826 148 23 26 chr17 59883680 59883990 -25554490 + AluJb SINE Alu 1 309 -3 2239 97 7 0 chr17 59884134 59884423 -25554057 + AluY SINE Alu 1 291 -20 27 29 0 0 chr17 59884423 59884457 -25554023 + AT_rich Low_complexity Low_complexity 1 34 0 890 173 116 73 chr17 59884539 59884717 -25553763 - MER34B LTR ERV1 0 565 396 1955 147 0 23 chr17 59884717 59885016 -25553464 + AluSx SINE Alu 1 292 -20 890 173 116 73 chr17 59885016 59885348 -25553132 - MER34B LTR ERV1 -169 396 11 1395 106 0 5 chr17 59885568 59885757 -25552723 + AluSg SINE Alu 1 188 -122 1176 127 0 12 chr17 59885758 59885923 -25552557 + AluY SINE Alu 57 219 -92 1302 102 0 0 chr17 59886024 59886190 -25552290 + AluSq SINE Alu 131 296 -17 2181 118 3 16 chr17 59886336 59886650 -25551830 - AluSg SINE Alu 0 310 1 180 0 0 0 chr17 59887447 59887467 -25551013 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 2327 73 0 3 chr17 59887470 59887756 -25550724 - AluY SINE Alu -26 285 1 2308 110 0 0 chr17 59887823 59888122 -25550358 - AluSx SINE Alu -13 299 1 1800 151 47 0 chr17 59888124 59888403 -25550077 - AluJb SINE Alu -20 292 1 1997 125 24 3 chr17 59889132 59889427 -25549053 + AluSx SINE Alu 1 301 -11 526 212 53 53 chr17 59890036 59890168 -25548312 + MIR SINE MIR 18 149 -113 353 319 88 11 chr17 59890742 59890924 -25547556 + MIR SINE MIR 57 252 -10 2245 84 0 0 chr17 59892221 59892520 -25545960 - AluSg SINE Alu -11 299 1 1594 152 46 7 chr17 59892751 59893034 -25545446 + AluJb SINE Alu 1 294 -18 1659 170 3 0 chr17 59893441 59893756 -25544724 + AluJb SINE Alu 1 316 0 1946 73 0 0 chr17 59893813 59894059 -25544421 + AluY SINE Alu 56 301 -10 1994 121 3 0 chr17 59894388 59894678 -25543802 + AluSc SINE Alu 1 291 -18 2160 84 11 0 chr17 59894680 59894967 -25543513 + AluY SINE Alu 1 290 -21 205 246 0 31 chr17 59894974 59895039 -25543441 + A-rich Low_complexity Low_complexity 6 68 0 473 297 162 5 chr17 59895176 59895361 -25543119 + MIR SINE MIR 23 236 -26 1871 154 3 0 chr17 59895487 59895792 -25542688 + AluSq SINE Alu 1 306 -7 275 207 305 0 chr17 59895927 59896009 -25542471 - L2 LINE L2 -15 3298 3192 1005 118 21 0 chr17 59896274 59896418 -25542062 + AluSx SINE Alu 1 147 -166 2166 165 64 13 chr17 59896476 59896869 -25541611 - LTR3 LTR ERVK -15 417 5 1039 155 0 0 chr17 59896871 59897045 -25541435 + AluSx SINE Alu 139 312 0 194 262 0 0 chr17 59897203 59897245 -25541235 + L2 LINE L2 3261 3302 -11 212 286 92 0 chr17 59897252 59897350 -25541130 + L2 LINE L2 1992 2098 -1216 486 252 136 37 chr17 59897369 59897611 -25540869 + L2 LINE L2 2228 2493 -821 1045 152 69 28 chr17 59897611 59897828 -25540652 - AluJo SINE Alu -76 236 11 297 331 76 49 chr17 59897843 59897890 -25540590 + L2 LINE L2 2692 2736 -578 2180 104 0 10 chr17 59897890 59898197 -25540283 - AluSx SINE Alu -8 304 1 297 331 76 49 chr17 59898197 59898412 -25540068 + L2 LINE L2 2736 2961 -353 1924 100 0 7 chr17 59898453 59898723 -25539757 - AluSx SINE Alu -12 300 33 24 0 0 0 chr17 59898874 59898898 -25539582 + AT_rich Low_complexity Low_complexity 1 24 0 1286 169 59 4 chr17 59898937 59899174 -25539306 - AluSx SINE Alu -22 290 41 919 104 42 0 chr17 59899225 59899420 -25539060 - AluSg/x SINE Alu 0 333 133 2073 110 0 13 chr17 59899430 59899730 -25538750 - AluSq SINE Alu -16 297 2 1956 108 0 0 chr17 59899854 59900122 -25538358 - AluSc SINE Alu -41 268 1 2224 95 0 0 chr17 59900131 59900426 -25538054 - AluSx SINE Alu -17 295 1 2057 118 0 23 chr17 59900512 59900816 -25537664 - AluSx SINE Alu -15 297 1 701 114 0 0 chr17 59900824 59900929 -25537551 - AluSg/x SINE Alu 0 312 208 259 179 0 0 chr17 59900929 59900968 -25537512 - Alu SINE Alu -259 40 2 430 105 0 0 chr17 59901233 59901290 -25537190 + Alu SINE Alu 1 57 -254 1650 170 3 20 chr17 59901353 59901653 -25536827 + AluSx SINE Alu 5 299 -13 1375 154 53 8 chr17 59901661 59901908 -25536572 + AluJb SINE Alu 1 258 -54 1914 137 23 3 chr17 59902038 59902344 -25536136 - AluSx SINE Alu 0 312 1 180 176 0 0 chr17 59902406 59902440 -25536040 + (TA)n Simple_repeat Simple_repeat 2 35 0 1802 106 79 7 chr17 59902620 59902912 -25535568 - AluSq SINE Alu 0 313 1 1930 130 19 13 chr17 59903145 59903452 -25535028 - AluSx SINE Alu -3 309 1 498 194 144 58 chr17 59903700 59903839 -25534641 + FRAM SINE Alu 14 164 -12 893 182 6 12 chr17 59904221 59904386 -25534094 + U1 snRNA snRNA 1 164 -1 299 209 131 117 chr17 59904639 59904740 -25533740 - MLT1D LTR MaLR -212 293 195 2160 100 0 0 chr17 59904740 59905040 -25533440 - AluSq SINE Alu -13 300 1 299 209 131 117 chr17 59905040 59905056 -25533424 - MLT1D LTR MaLR -310 195 181 333 0 0 0 chr17 59905056 59905093 -25533387 + (TTA)n Simple_repeat Simple_repeat 3 39 0 4667 58 2 0 chr17 59905093 59905660 -25532820 - L1PA6 LINE L1 -18 6136 5569 299 209 131 117 chr17 59905660 59905746 -25532734 - MLT1D LTR MaLR -323 182 85 2157 98 0 0 chr17 59905747 59906042 -25532438 - AluSg SINE Alu -15 295 1 1091 144 0 0 chr17 59906178 59906338 -25532142 + U1 snRNA snRNA 5 164 -1 1415 146 33 57 chr17 59906614 59906770 -25531710 - AluJo SINE Alu -18 294 147 1957 96 48 7 chr17 59906770 59907063 -25531417 - AluSq SINE Alu -8 305 1 1415 146 33 57 chr17 59907063 59907207 -25531273 - AluJo SINE Alu -165 147 1 1788 115 10 51 chr17 59907322 59907508 -25530972 - AluSq SINE Alu 0 312 142 2095 126 0 0 chr17 59907508 59907818 -25530662 - AluSq SINE Alu -3 310 1 1788 115 10 51 chr17 59907818 59907955 -25530525 - AluSq SINE Alu -170 142 1 256 279 6 21 chr17 59908007 59908108 -25530372 + AluJ/FLAM SINE Alu 3 60 -242 183 329 14 27 chr17 59908158 59908231 -25530249 - L2 LINE L2 -1 3312 3241 689 171 0 0 chr17 59908630 59908753 -25529727 - L1M4 LINE L1 -700 5484 5362 1809 153 7 3 chr17 59908754 59909049 -25529431 - AluSx SINE Alu -16 296 1 376 200 0 0 chr17 59909142 59909212 -25529268 - L1M4 LINE L1 -1028 5118 5049 1954 144 0 0 chr17 59909212 59909524 -25528956 - AluSx SINE Alu 0 312 1 355 261 98 39 chr17 59909591 59909619 -25528861 - MER20B DNA MER1_type -2 781 756 2204 100 0 7 chr17 59909619 59909920 -25528560 - AluSx SINE Alu -13 299 1 355 261 98 39 chr17 59909920 59910044 -25528436 - MER20B DNA MER1_type -27 756 620 1421 167 16 49 chr17 59910044 59910349 -25528131 + AluJb SINE Alu 1 295 -17 403 248 115 19 chr17 59910653 59910810 -25527670 - MIR SINE MIR -56 206 35 2161 88 17 3 chr17 59912146 59912441 -25526039 - AluSq SINE Alu -14 299 1 1936 85 0 0 chr17 59912567 59912813 -25525667 + AluSq SINE Alu 1 246 -67 536 213 19 45 chr17 59913267 59913422 -25525058 + U1 snRNA snRNA 10 160 -5 731 234 64 11 chr17 59913587 59913775 -25524705 + AluJb SINE Alu 110 307 -5 2072 97 10 3 chr17 59913894 59914184 -25524296 + AluSx SINE Alu 11 302 -10 1117 111 0 29 chr17 59914214 59914267 -25524213 + AluSg/x SINE Alu 144 197 -113 5635 64 10 0 chr17 59914267 59914951 -25523529 - LTR8 LTR ERV1 0 691 1 1117 111 0 29 chr17 59914951 59915069 -25523411 + AluSg/x SINE Alu 197 310 0 332 268 71 31 chr17 59915164 59915291 -25523189 - HUERS-P1 LTR ERV1 -5531 732 601 1141 157 114 104 chr17 59915302 59915601 -25522879 + AluJo SINE Alu 1 302 0 1907 138 0 40 chr17 59915612 59915792 -25522688 - AluSx SINE Alu 0 312 126 2144 110 7 0 chr17 59915792 59916093 -25522387 - AluSg SINE Alu -7 303 1 2117 122 0 3 chr17 59916093 59916405 -25522075 - AluSx SINE Alu -1 311 1 1907 138 0 40 chr17 59916405 59916548 -25521932 - AluSx SINE Alu -184 128 1 608 156 48 96 chr17 59916865 59916947 -25521533 - PABL_B LTR ERV1 0 667 595 1679 120 79 28 chr17 59916947 59917086 -25521394 + AluSx SINE Alu 1 131 -181 2053 103 10 17 chr17 59917086 59917387 -25521093 + AluSc SINE Alu 2 300 -9 1679 120 79 28 chr17 59917387 59917538 -25520942 + AluSx SINE Alu 131 306 -6 608 156 48 96 chr17 59917538 59917616 -25520864 - PABL_B LTR ERV1 -72 595 515 327 115 0 39 chr17 59917616 59917668 -25520812 + Alu SINE Alu 1 50 -252 377 195 73 0 chr17 59917678 59917760 -25520720 - PABL_B LTR ERV1 0 667 580 2042 130 3 0 chr17 59917760 59918061 -25520419 + AluSq SINE Alu 1 302 -11 353 252 48 48 chr17 59918079 59918226 -25520254 - PABL_A LTR ERV1 -153 507 361 329 259 27 103 chr17 59918252 59918368 -25520112 - PABL_B LTR ERV1 -460 207 115 2335 67 10 0 chr17 59918368 59918667 -25519813 - AluY SINE Alu -9 302 1 329 259 27 103 chr17 59918667 59918774 -25519706 - PABL_B LTR ERV1 -552 115 1 649 164 19 0 chr17 59918847 59918951 -25519529 - LTR26B LTR ERV1 -29 502 397 940 197 10 31 chr17 59918955 59919148 -25519332 - MSTD LTR MaLR -207 189 1 669 226 111 71 chr17 59919243 59919335 -25519145 - MIR SINE MIR 0 262 175 2156 92 0 3 chr17 59919335 59919627 -25518853 + AluSc SINE Alu 6 296 -13 669 226 111 71 chr17 59919627 59919786 -25518694 - MIR SINE MIR -87 175 1 2637 106 3 13 chr17 59919933 59920312 -25518168 - THE1C LTR MaLR 0 375 1 210 37 0 0 chr17 59920879 59920906 -25517574 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1652 141 14 40 chr17 59921270 59921567 -25516913 - AluJb SINE Alu -10 302 14 810 151 9 155 chr17 59921794 59922013 -25516467 + AluJo SINE Alu 6 192 -120 2220 94 19 0 chr17 59922214 59922521 -25515959 + AluSq SINE Alu 1 313 0 2082 87 0 0 chr17 59922526 59922801 -25515679 + AluSx SINE Alu 1 275 -37 194 0 39 0 chr17 59922813 59922839 -25515641 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2371 86 0 0 chr17 59923186 59923487 -25514993 + AluSq SINE Alu 1 301 -12 2369 47 40 0 chr17 59923489 59923788 -25514692 + AluYa5 SINE Alu 1 311 0 2026 113 0 13 chr17 59924566 59924866 -25513614 + AluSx SINE Alu 1 296 -16 212 408 0 0 chr17 59925068 59925144 -25513336 - L2 LINE L2 -250 3063 2988 714 164 55 16 chr17 59925145 59925273 -25513207 + FLAM_A SINE Alu 1 133 0 649 251 42 60 chr17 59925454 59925647 -25512833 - L1MEc LINE L1 -4156 2240 2045 1118 168 82 105 chr17 59925647 59925999 -25512481 - MER2 DNA MER2_type 0 344 1 649 251 42 60 chr17 59925999 59926119 -25512361 - L1MEc LINE L1 -4351 2045 1933 2360 55 3 0 chr17 59926119 59926411 -25512069 + AluY SINE Alu 1 293 -18 649 251 42 60 chr17 59926411 59926478 -25512002 - L1MEc LINE L1 -4463 1933 1866 2191 107 0 16 chr17 59926488 59926805 -25511675 + AluSx SINE Alu 1 312 0 2210 64 19 29 chr17 59926825 59927137 -25511343 + AluSq SINE Alu 1 309 -4 2002 123 3 26 chr17 59927137 59927445 -25511035 + AluSx SINE Alu 1 302 -10 2145 94 0 0 chr17 59927848 59928134 -25510346 + AluSg SINE Alu 1 286 -24 465 207 36 7 chr17 59928137 59928152 -25510328 - L1ME3A LINE L1 -112 6052 6039 766 204 0 0 chr17 59928152 59928284 -25510196 + FLAM_C SINE Alu 2 133 0 465 207 36 7 chr17 59928284 59928384 -25510096 - L1ME3A LINE L1 -125 6039 5942 296 311 11 11 chr17 59928850 59928940 -25509540 - MIR3 SINE MIR -8 200 111 204 281 53 0 chr17 59929139 59929196 -25509284 - MIR SINE MIR -106 102 43 405 270 18 74 chr17 59929974 59930137 -25508343 + MIR3 SINE MIR 20 173 -35 29 0 0 0 chr17 59930958 59930987 -25507493 + AT_rich Low_complexity Low_complexity 1 29 0 305 277 90 45 chr17 59931279 59931410 -25507070 + MIR SINE MIR 61 203 -59 3353 147 36 7 chr17 59931410 59931932 -25506548 + L1MD1 LINE L1 5634 6176 -66 1864 102 6 87 chr17 59931932 59932254 -25506226 - AluSq SINE Alu -17 296 1 3353 147 36 7 chr17 59932254 59932315 -25506165 + L1MD1 LINE L1 6176 6234 -8 305 277 90 45 chr17 59932315 59932360 -25506120 + MIR SINE MIR 203 245 -17 199 204 0 23 chr17 59932356 59932400 -25506080 + MIR SINE MIR 97 139 -69 * 498 285 103 6 chr17 59932406 59932571 -25505909 - MIR SINE MIR -5 257 77 1249 275 46 26 chr17 59932571 59932960 -25505520 - MLT1I LTR MaLR -4 405 9 220 327 9 56 chr17 59932997 59933042 -25505438 + MIR SINE MIR 152 198 -64 2348 80 0 3 chr17 59933042 59933344 -25505136 + AluSp SINE Alu 1 301 -12 220 327 9 56 chr17 59933344 59933405 -25505075 + MIR SINE MIR 198 253 -9 247 266 266 24 chr17 59933629 59933753 -25504727 - MIR3 SINE MIR -5 203 50 2243 85 7 7 chr17 59933756 59934061 -25504419 - AluSc SINE Alu -3 306 2 201 121 0 0 chr17 59934468 59934501 -25503979 + (TAA)n Simple_repeat Simple_repeat 1 33 0 2085 104 0 24 chr17 59934640 59934937 -25503543 + AluSq SINE Alu 2 291 -22 2436 59 0 7 chr17 59935805 59936109 -25502371 - AluY SINE Alu -9 302 1 279 0 0 0 chr17 59936173 59936204 -25502276 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 249 242 32 0 chr17 59936823 59936885 -25501595 + CT-rich Low_complexity Low_complexity 1 64 0 2047 135 0 6 chr17 59936920 59937232 -25501248 + AluJb SINE Alu 1 310 -2 516 244 161 57 chr17 59937332 59937527 -25500953 - L2 LINE L2 -5 3267 3043 2213 115 0 16 chr17 59937527 59937841 -25500639 + AluSx SINE Alu 1 309 -3 516 244 161 57 chr17 59937841 59937875 -25500605 - L2 LINE L2 -229 3043 3014 245 152 0 61 chr17 59938183 59938249 -25500231 - L1ME4a LINE L1 -9 6112 6051 478 252 166 37 chr17 59938279 59938628 -25499852 - L1ME4a LINE L1 -149 5972 5579 21 36 0 0 chr17 59941002 59941030 -25497450 + AT_rich Low_complexity Low_complexity 1 28 0 2205 131 3 3 chr17 59941260 59941573 -25496907 - AluSq SINE Alu 0 313 1 2472 103 0 0 chr17 59941629 59941941 -25496539 - AluSx SINE Alu 0 312 1 806 211 56 86 chr17 59942044 59942276 -25496204 + MIR SINE MIR 5 229 -33 1116 179 27 0 chr17 59942384 59942568 -25495912 - MER5A DNA MER1_type 0 189 1 294 266 73 18 chr17 59942816 59942925 -25495555 + MIR SINE MIR 58 172 -90 4752 123 37 41 chr17 59943771 59944618 -25493862 - L1MB2 LINE L1 -4 6167 5325 300 27 0 0 chr17 59944621 59944658 -25493822 + (TG)n Simple_repeat Simple_repeat 2 38 0 310 275 0 25 chr17 59944666 59944746 -25493734 - L1MC4 LINE L1 -1339 6703 6626 396 0 0 0 chr17 59944755 59944799 -25493681 + (TC)n Simple_repeat Simple_repeat 2 45 0 342 0 0 0 chr17 59944798 59944836 -25493644 + (TA)n Simple_repeat Simple_repeat 1 38 0 * 704 175 35 0 chr17 59944838 59944952 -25493528 - FLAM_A SINE Alu -15 118 1 474 200 0 45 chr17 59945261 59945371 -25493109 - MER96B DNA MER1_type? 0 417 313 1820 149 4 7 chr17 59945371 59945647 -25492833 - AluJb SINE Alu -16 296 22 2260 102 7 20 chr17 59945647 59945950 -25492530 + AluSx SINE Alu 1 299 -13 2202 132 3 0 chr17 59946343 59946654 -25491826 - AluSx SINE Alu 0 312 1 1644 268 99 77 chr17 59947110 59948116 -25490364 + L3 LINE CR1 548 1576 -1 294 312 56 48 chr17 59948250 59948375 -25490105 - L2 LINE L2 -9 3263 3138 764 239 105 13 chr17 59948549 59948787 -25489693 + MIR SINE MIR 2 261 -1 207 0 0 0 chr17 59948793 59948816 -25489664 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2297 96 7 0 chr17 59949277 59949570 -25488910 - AluSq SINE Alu -18 295 1 739 292 125 27 chr17 59949867 59950306 -25488174 + LTR33 LTR ERVL 35 516 -5 2475 74 3 0 chr17 59950887 59951185 -25487295 + AluSq SINE Alu 1 299 -14 22 35 0 0 chr17 59951747 59951776 -25486704 + AT_rich Low_complexity Low_complexity 1 29 0 1891 169 3 3 chr17 59952012 59952308 -25486172 + AluJo SINE Alu 1 296 -16 2315 81 30 0 chr17 59952460 59952755 -25485725 - AluY SINE Alu -7 304 1 2168 111 3 48 chr17 59952818 59953133 -25485347 - AluSx SINE Alu -11 301 1 1795 161 7 14 chr17 59953441 59953595 -25484885 - AluJo SINE Alu -22 290 137 2289 119 0 0 chr17 59953595 59953898 -25484582 - AluSq SINE Alu -8 305 3 1795 161 7 14 chr17 59953898 59954035 -25484445 - AluJo SINE Alu -175 137 1 2395 107 0 0 chr17 59954422 59954730 -25483750 - AluSx SINE Alu -4 308 1 319 286 84 49 chr17 59954730 59954808 -25483672 + L2 LINE L2 1270 1344 -1970 2513 75 0 10 chr17 59954808 59955116 -25483364 - AluY SINE Alu -6 305 1 319 286 84 49 chr17 59955116 59955240 -25483240 + L2 LINE L2 1344 1479 -1835 697 176 16 8 chr17 59955472 59955597 -25482883 - AluJb SINE Alu -186 126 1 775 298 227 37 chr17 59955607 59955843 -25482637 + L2 LINE L2 1656 1846 -1468 2004 155 0 7 chr17 59955843 59956140 -25482340 + AluSx SINE Alu 2 296 -16 775 298 227 37 chr17 59956140 59956608 -25481872 + L2 LINE L2 1846 2494 -820 1976 179 0 0 chr17 59956622 59956923 -25481557 + AluJo SINE Alu 1 301 -11 277 220 0 0 chr17 59956929 59956979 -25481501 + AluYb8 SINE Alu 132 181 -127 334 293 50 10 chr17 59957003 59957102 -25481378 + L2 LINE L2 2550 2652 -662 839 258 180 31 chr17 59957109 59957640 -25480840 - L2 LINE L2 -7 3306 2702 2277 114 0 0 chr17 59957983 59958282 -25480198 - AluY SINE Alu -12 299 1 494 270 9 9 chr17 59958362 59958477 -25480003 + L2 LINE L2 3154 3268 -4 301 252 76 76 chr17 59958446 59958577 -25479903 - MIR SINE MIR -49 213 83 * 1188 181 168 10 chr17 59958756 59959065 -25479415 + MSTC LTR MaLR 1 358 -70 2416 114 0 0 chr17 59959068 59959376 -25479104 - AluSx SINE Alu -4 308 1 295 185 31 0 chr17 59959503 59959568 -25478912 + MSTC LTR MaLR 361 427 -1 2171 131 3 3 chr17 59959790 59960088 -25478392 + AluSx SINE Alu 1 298 -14 292 292 69 0 chr17 59960334 59960464 -25478016 + L1ME4a LINE L1 4681 4819 -1327 1420 154 0 14 chr17 59960468 59960682 -25477798 + AluJo SINE Alu 85 295 -17 869 273 80 17 chr17 59960735 59961178 -25477302 + L1ME4a LINE L1 5159 5634 -813 655 218 157 0 chr17 59961192 59961339 -25477141 - MER5A DNA MER1_type -10 179 10 773 234 58 0 chr17 59961364 59961518 -25476962 - MER5B DNA MER1_type -12 166 4 282 231 10 39 chr17 59961519 59961623 -25476857 + L1ME4a LINE L1 5647 5747 -374 709 168 84 8 chr17 59961629 59961760 -25476720 + FAM SINE Alu 33 173 -12 446 281 150 49 chr17 59961760 59962066 -25476414 + L1ME4a LINE L1 5741 6077 -44 819 156 7 15 chr17 59962068 59962203 -25476277 - AluJb SINE Alu -178 134 1 2153 116 0 44 chr17 59962254 59962574 -25475906 + AluSq SINE Alu 1 306 -7 217 286 18 0 chr17 59962839 59962895 -25475585 - MIR SINE MIR -68 140 84 2538 87 0 0 chr17 59962946 59963258 -25475222 - AluSx SINE Alu 0 312 1 2266 117 0 16 chr17 59963266 59963582 -25474898 - AluSq SINE Alu -1 312 2 940 249 76 4 chr17 59967393 59967630 -25470850 + MIR SINE MIR 9 262 0 775 244 108 6 chr17 59967891 59968067 -25470413 + MER91A DNA MER1_type 1 194 -2 279 173 0 0 chr17 59968667 59968719 -25469761 + CT-rich Low_complexity Low_complexity 1 52 0 287 254 130 80 chr17 59968719 59968857 -25469623 - L2 LINE L2 -5 3267 3123 909 163 54 7 chr17 59970363 59970510 -25467970 - FRAM SINE Alu -12 154 1 2528 77 0 0 chr17 59970609 59970908 -25467572 - AluSg SINE Alu -11 299 1 684 189 0 0 chr17 59971080 59971191 -25467289 - MER81 DNA DNA 0 114 4 315 194 90 0 chr17 59972204 59972271 -25466209 - MIR SINE MIR -79 183 111 223 265 0 0 chr17 59972691 59972740 -25465740 - L2 LINE L2 -70 3202 3154 416 333 105 18 chr17 59972855 59973074 -25465406 + L3 LINE CR1 1332 1569 -8 360 242 176 33 chr17 59974011 59974164 -25464316 - MIR3 SINE MIR -12 196 22 670 190 9 0 chr17 59975034 59975150 -25463330 - MIR3 SINE MIR -14 194 78 25 65 0 0 chr17 59976323 59976369 -25462111 + GC_rich Low_complexity Low_complexity 1 46 0 489 180 22 0 chr17 59979834 59979923 -25458557 + MER94 DNA DNA 9 99 -35 221 268 28 14 chr17 59981369 59981440 -25457040 + CT-rich Low_complexity Low_complexity 1 72 0 453 19 0 0 chr17 59981844 59981898 -25456582 + (TG)n Simple_repeat Simple_repeat 2 55 0 501 218 32 48 chr17 59983486 59983610 -25454870 + MIR3 SINE MIR 85 206 -2 1646 169 11 4 chr17 59983632 59983899 -25454581 + AluJb SINE Alu 43 311 -1 636 132 19 0 chr17 59984669 59984775 -25453705 - MER45A DNA AcHobo 0 178 71 227 306 63 72 chr17 59984784 59984895 -25453585 - L2 LINE L2 -25 3247 3138 1778 163 20 13 chr17 59985068 59985368 -25453112 - AluJo SINE Alu -10 302 1 224 278 17 96 chr17 59985370 59985485 -25452995 + MIR SINE MIR 93 198 -64 2155 121 23 7 chr17 59985774 59986080 -25452400 - AluSx SINE Alu -1 311 1 1750 53 18 13 chr17 59988596 59988821 -25449659 + AluY SINE Alu 86 311 0 2034 77 70 0 chr17 59988876 59989149 -25449331 - AluY SINE Alu -19 292 1 288 248 158 20 chr17 59989423 59989524 -25448956 - L2 LINE L2 -1 3312 3198 320 312 195 10 chr17 59992794 59992999 -25445481 + MIR SINE MIR 20 262 0 2188 96 3 0 chr17 59996172 59996473 -25442007 + AluSx SINE Alu 1 302 -10 661 278 44 40 chr17 59996600 59996848 -25441632 + MIR SINE MIR 8 256 -6 392 216 90 67 chr17 59997201 59997335 -25441145 + MIR SINE MIR 126 262 0 718 267 47 22 chr17 59997336 59997568 -25440912 - L2 LINE L2 0 3313 3076 974 143 0 7 chr17 59997581 59997735 -25440745 + AluJo SINE Alu 1 153 -159 1542 160 0 4 chr17 59997735 59997979 -25440501 + AluJb SINE Alu 52 294 -18 1970 245 50 20 chr17 59997979 59998568 -25439912 - L2 LINE L2 -255 3058 2447 191 265 120 51 chr17 59998565 59998682 -25439798 - L2 LINE L2 -5 3308 3184 * 1758 158 0 23 chr17 59998738 59999042 -25439438 + AluJo SINE Alu 1 297 -15 187 339 91 8 chr17 59999079 59999200 -25439280 - L2 LINE L2 -189 3083 2953 324 0 0 0 chr17 60000503 60000539 -25437941 + (TG)n Simple_repeat Simple_repeat 2 37 0 756 227 89 30 chr17 60000574 60000777 -25437703 + MER58C DNA MER1_type 1 215 0 413 283 130 23 chr17 60001792 60001969 -25436511 + MIR SINE MIR 9 204 -58 1689 156 7 23 chr17 60001969 60002271 -25436209 + AluSx SINE Alu 1 297 -15 2144 115 3 0 chr17 60002527 60002832 -25435648 - AluSx SINE Alu -6 306 1 2161 102 0 7 chr17 60004787 60005092 -25433388 - AluSx SINE Alu -9 303 1 301 240 115 107 chr17 60005548 60005931 -25432549 - L1ME4a LINE L1 -12 6109 5724 2214 97 3 3 chr17 60006000 60006300 -25432180 + AluSx SINE Alu 1 300 -12 293 180 82 0 chr17 60006302 60006363 -25432117 - L1MB2 LINE L1 -14 6157 6092 2098 117 10 0 chr17 60006372 60006680 -25431800 - AluSx SINE Alu -1 311 1 300 154 0 0 chr17 60006752 60006804 -25431676 + (TA)n Simple_repeat Simple_repeat 2 53 0 253 221 23 35 chr17 60006807 60006893 -25431587 + L1MC4 LINE L1 6619 6703 -1339 1318 193 100 4 chr17 60006959 60007229 -25431251 - AluJo SINE Alu -6 296 1 224 303 56 28 chr17 60007528 60007670 -25430810 - L2 LINE L2 0 3313 3168 2167 71 3 3 chr17 60007683 60007965 -25430515 - AluSc SINE Alu -3 306 25 1960 143 0 0 chr17 60008031 60008324 -25430156 + AluJb SINE Alu 1 293 -19 2280 53 7 30 chr17 60008528 60008830 -25429650 + AluY SINE Alu 1 295 -16 1781 117 30 11 chr17 60008925 60009191 -25429289 - AluSx SINE Alu -39 273 3 23 0 0 0 chr17 60009202 60009225 -25429255 + AT_rich Low_complexity Low_complexity 1 23 0 446 198 19 0 chr17 60009864 60009970 -25428510 + CT-rich Low_complexity Low_complexity 4 111 0 286 214 38 36 chr17 60010119 60010199 -25428281 + L1MC5 LINE L1 7842 7920 -122 1894 141 0 32 chr17 60010199 60010511 -25427969 - AluSx SINE Alu -9 303 2 286 214 38 36 chr17 60010511 60010562 -25427918 + L1MC5 LINE L1 7920 8042 0 386 297 0 16 chr17 60010567 60010695 -25427785 - MER5A DNA MER1_type -28 161 36 371 232 225 7 chr17 60010751 60010889 -25427591 - L2 LINE L2 -2 3311 3144 565 323 86 5 chr17 60010893 60011091 -25427389 - MIR SINE MIR -38 224 11 442 303 157 6 chr17 60011559 60011737 -25426743 - MIR SINE MIR -57 205 1 234 325 61 25 chr17 60011742 60011905 -25426575 - L2 LINE L2 -1018 2296 2128 241 300 88 0 chr17 60013583 60013663 -25424817 - L2 LINE L2 -5 3308 3222 326 300 0 0 chr17 60013731 60013811 -25424669 - L2 LINE L2 -212 3060 2981 229 324 104 64 chr17 60013953 60014116 -25424364 - L2 LINE L2 -459 2855 2677 2392 52 0 23 chr17 60014116 60014425 -25424055 - AluY SINE Alu -9 302 1 229 324 104 64 chr17 60014425 60014511 -25423969 - L2 LINE L2 -637 2677 2596 1263 157 17 64 chr17 60014684 60014804 -25423676 - MER58A DNA MER1_type -2196 224 119 1820 161 0 3 chr17 60014804 60015103 -25423377 + AluJb SINE Alu 1 298 -14 1263 157 17 64 chr17 60015103 60015217 -25423263 - MER58A DNA MER1_type -2301 119 1 758 262 167 0 chr17 60015251 60015472 -25423008 + MIR SINE MIR 4 261 -1 2091 115 3 0 chr17 60015989 60016294 -25422186 + AluSc SINE Alu 1 306 -3 21 0 0 0 chr17 60016421 60016442 -25422038 + AT_rich Low_complexity Low_complexity 1 21 0 758 173 0 0 chr17 60016442 60016569 -25421911 - FLAM_C SINE Alu -6 127 1 212 57 0 29 chr17 60018017 60018052 -25420428 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1940 127 10 0 chr17 60019032 60019323 -25419157 - AluSx SINE Alu -18 294 1 23 33 0 0 chr17 60020153 60020183 -25418297 + GC_rich Low_complexity Low_complexity 1 30 0 27 62 0 0 chr17 60020337 60020385 -25418095 + GC_rich Low_complexity Low_complexity 1 48 0 29 0 0 0 chr17 60020695 60020724 -25417756 + GC_rich Low_complexity Low_complexity 1 29 0 2310 100 0 0 chr17 60021252 60021562 -25416918 + AluSg SINE Alu 1 310 0 2265 89 0 3 chr17 60022063 60022376 -25416104 - AluSq SINE Alu -1 312 1 1932 129 0 7 chr17 60022378 60022673 -25415807 - AluSx SINE Alu -19 293 1 2009 102 3 13 chr17 60022693 60022996 -25415484 - AluJb SINE Alu -12 300 1 2439 65 0 3 chr17 60023205 60023512 -25414968 + AluSc SINE Alu 1 306 -3 1000 198 20 0 chr17 60025499 60025696 -25412784 - AluJb SINE Alu -11 301 101 700 168 38 15 chr17 60025696 60025721 -25412759 - FLAM_C SINE Alu -172 140 117 2097 126 0 3 chr17 60025721 60026031 -25412449 - AluSx SINE Alu -3 309 1 700 168 38 15 chr17 60026031 60026136 -25412344 - FLAM_C SINE Alu -195 117 7 207 0 0 0 chr17 60026326 60026349 -25412131 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 632 133 0 0 chr17 60026353 60026436 -25412044 - FRAM SINE Alu -30 146 64 1924 152 0 0 chr17 60026442 60026739 -25411741 - AluJb SINE Alu -14 298 2 359 191 107 36 chr17 60027136 60027220 -25411260 + MER5A DNA MER1_type 100 189 0 1526 182 14 0 chr17 60027374 60027649 -25410831 + AluJo SINE Alu 1 279 -33 387 0 0 0 chr17 60027652 60027695 -25410785 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 1943 137 7 0 chr17 60028855 60029154 -25409326 + AluSx SINE Alu 1 301 -11 27 29 0 0 chr17 60029201 60029235 -25409245 + AT_rich Low_complexity Low_complexity 1 34 0 2312 93 0 3 chr17 60029565 60029878 -25408602 - AluSq SINE Alu -1 312 1 2048 91 3 64 chr17 60029952 60030132 -25408348 - AluSg SINE Alu 0 310 157 204 40 0 0 chr17 60030132 60030157 -25408323 + (TG)n Simple_repeat Simple_repeat 2 26 0 2048 91 3 64 chr17 60030157 60030306 -25408174 - AluSg SINE Alu -153 157 1 37 23 0 0 chr17 60030613 60030657 -25407823 + AT_rich Low_complexity Low_complexity 1 44 0 2456 47 0 3 chr17 60030698 60030995 -25407485 + AluY SINE Alu 1 296 -15 2191 102 0 7 chr17 60031038 60031341 -25407139 + AluSg SINE Alu 1 301 -9 239 248 0 15 chr17 60032190 60032323 -25406157 + GA-rich Low_complexity Low_complexity 1 131 0 23 0 0 0 chr17 60033451 60033474 -25405006 + AT_rich Low_complexity Low_complexity 1 23 0 785 178 23 0 chr17 60033570 60033699 -25404781 + AluJo SINE Alu 127 258 -54 21 0 0 0 chr17 60033861 60033882 -25404598 + AT_rich Low_complexity Low_complexity 1 21 0 1388 119 88 0 chr17 60034361 60034588 -25403892 + AluJb SINE Alu 48 294 -18 712 256 177 0 chr17 60035180 60035395 -25403085 - MIR SINE MIR -2 260 8 340 229 15 84 chr17 60035625 60035756 -25402724 + L2 LINE L2 3150 3271 -1 220 270 161 29 chr17 60035759 60035896 -25402584 + MIR SINE MIR 52 206 -56 1364 201 13 29 chr17 60035957 60036271 -25402209 - AluJo SINE Alu -3 309 1 2034 110 0 10 chr17 60036301 60036592 -25401888 + AluSx SINE Alu 1 288 -24 24 32 0 0 chr17 60036674 60036705 -25401775 + AT_rich Low_complexity Low_complexity 1 31 0 746 173 8 15 chr17 60036707 60036840 -25401640 + FLAM_C SINE Alu 1 132 -1 1248 138 57 82 chr17 60037222 60037504 -25400976 - L1MB3 LINE L1 -7 6176 5902 2213 84 0 0 chr17 60037523 60037808 -25400672 - AluSg SINE Alu -21 289 5 2430 186 66 0 chr17 60037812 60038296 -25400184 - L1MB3 LINE L1 -33 6150 5635 1849 143 0 3 chr17 60040051 60040337 -25398143 - AluJb SINE Alu -22 290 6 345 263 7 24 chr17 60040367 60040518 -25397962 + MIR SINE MIR 45 245 -17 891 235 19 72 chr17 60040721 60040985 -25397495 - MIR SINE MIR 0 262 13 324 194 0 28 chr17 60041751 60041823 -25396657 + MER3 DNA MER1_type 34 103 -106 * 732 139 82 0 chr17 60041770 60041892 -25396588 - MER3 DNA MER1_type -5 204 73 624 233 72 6 chr17 60041868 60042048 -25396432 - MER3 DNA MER1_type -17 192 1 * 1799 155 77 12 chr17 60042244 60042580 -25395900 - MER46B DNA MER2_type -2 234 2 767 181 0 36 chr17 60043135 60043273 -25395207 + AluJo SINE Alu 1 133 -169 270 160 0 0 chr17 60043288 60043338 -25395142 + GA-rich Low_complexity Low_complexity 2 51 0 878 159 16 110 chr17 60043338 60043520 -25394960 + AluJo SINE Alu 134 298 -14 2289 106 0 10 chr17 60043523 60043825 -25394655 + AluSq SINE Alu 2 300 -13 698 257 87 17 chr17 60043984 60044225 -25394255 + MIR SINE MIR 2 259 -3 229 195 0 0 chr17 60044395 60044436 -25394044 - L2 LINE L2 -10 3303 3263 1407 151 79 8 chr17 60046308 60046560 -25391920 + L1PB4 LINE L1 5887 6156 0 2213 110 7 0 chr17 60046577 60046868 -25391612 - AluSx SINE Alu -19 293 1 1911 123 22 4 chr17 60047195 60047503 -25390977 - AluSx SINE Alu 0 313 1 2496 55 7 0 chr17 60047631 60047923 -25390557 + AluY SINE Alu 1 294 -17 363 96 0 0 chr17 60047923 60047975 -25390505 + (TG)n Simple_repeat Simple_repeat 2 53 0 32 43 0 0 chr17 60047988 60048034 -25390446 + AT_rich Low_complexity Low_complexity 1 46 0 1684 197 3 7 chr17 60048125 60048419 -25390061 + AluJb SINE Alu 1 293 -19 485 132 13 0 chr17 60048436 60048512 -25389968 - MER69 DNA AcHobo -3 2523 2447 310 282 173 0 chr17 60048547 60048657 -25389823 - MER69 DNA AcHobo -2266 260 132 1445 137 105 60 chr17 60048657 60048781 -25389699 + AluJo SINE Alu 1 118 -194 2338 91 0 3 chr17 60048781 60049079 -25389401 - AluSg SINE Alu -13 297 1 1445 137 105 60 chr17 60049079 60049239 -25389241 + AluJo SINE Alu 118 298 -14 315 312 78 34 chr17 60049888 60050093 -25388387 + L3b LINE CR1 1149 1362 -221 300 267 76 38 chr17 60050560 60050691 -25387789 + MARNA DNA Mariner 285 420 -166 263 193 70 0 chr17 60050762 60050819 -25387661 - MIR SINE MIR -120 142 82 2160 128 3 0 chr17 60050823 60051128 -25387352 - AluSx SINE Alu -6 306 1 191 35 0 35 chr17 60051131 60051160 -25387320 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2169 119 0 3 chr17 60051173 60051468 -25387012 - AluSx SINE Alu -18 294 1 890 165 0 0 chr17 60051471 60051604 -25386876 - AluJo/FLAM SINE Alu -179 133 1 302 143 0 0 chr17 60051680 60051736 -25386744 - L1MB4 LINE L1 0 6180 6125 8458 175 23 63 chr17 60051738 60052250 -25386230 - L1MA6 LINE L1 0 7719 7188 270 0 0 0 chr17 60052250 60052280 -25386200 + (TG)n Simple_repeat Simple_repeat 2 31 0 8458 175 23 63 chr17 60052280 60054212 -25384268 - L1MA6 LINE L1 -531 7188 5179 1207 22 0 0 chr17 60054212 60054347 -25384133 - SVA Other Other -3 1383 1249 2080 90 7 21 chr17 60054349 60054638 -25383842 - AluSx SINE Alu -27 285 1 8458 175 23 63 chr17 60054638 60054810 -25383670 - L1MA6 LINE L1 -2541 5178 5186 2012 128 0 14 chr17 60054810 60055139 -25383341 - AluSp SINE Alu 0 325 1 8458 175 23 63 chr17 60055139 60055393 -25383087 - L1MA6 LINE L1 -2532 5187 4924 1040 186 0 0 chr17 60055398 60055570 -25382910 - AluJ SINE Alu -12 300 129 407 191 0 12 chr17 60055693 60055777 -25382703 - SVA Other Other -859 527 445 938 172 0 0 chr17 60055777 60055922 -25382558 - AluJ SINE Alu -167 145 1 5749 181 38 53 chr17 60055925 60056171 -25382309 - L1MA6 LINE L1 -2639 4926 4678 1621 162 36 23 chr17 60056171 60056479 -25382001 - AluJo SINE Alu 0 312 1 5749 181 38 53 chr17 60056479 60057357 -25381123 - L1MA6 LINE L1 -2887 4678 3788 2285 98 3 0 chr17 60057357 60057644 -25380836 - AluSq SINE Alu -25 288 1 5749 181 38 53 chr17 60057644 60057683 -25380797 - L1MA6 LINE L1 -3777 3788 3750 2461 84 3 0 chr17 60057683 60057980 -25380500 - AluSp SINE Alu -15 298 1 5749 181 38 53 chr17 60057980 60058088 -25380392 - L1MA6 LINE L1 -3815 3750 3642 2232 123 0 10 chr17 60058088 60058397 -25380083 - AluSx SINE Alu -6 306 1 2821 10 0 0 chr17 60058407 60058710 -25379770 - AluYa5 SINE Alu -8 303 1 5749 181 38 53 chr17 60058710 60058736 -25379744 - L1MA6 LINE L1 -3932 3633 3608 2090 131 0 0 chr17 60058736 60059033 -25379447 - AluSx SINE Alu -14 298 2 5749 181 38 53 chr17 60059033 60060268 -25378212 - L1MA6 LINE L1 -3957 3608 2426 1848 130 60 3 chr17 60060297 60060581 -25377899 - AluSx SINE Alu -10 302 3 2324 277 18 109 chr17 60060582 60061317 -25377163 - L1MA6 LINE L1 -5467 2098 1297 2249 107 0 0 chr17 60061317 60061606 -25376874 - AluSg SINE Alu -21 289 1 2324 277 18 109 chr17 60061606 60062279 -25376201 - L1MA6 LINE L1 -6268 1297 17 2297 96 3 7 chr17 60062294 60062597 -25375883 - AluSq SINE Alu -11 302 1 4264 171 43 42 chr17 60062597 60063019 -25375461 - L1MB2 LINE L1 -40 6131 5711 798 188 8 8 chr17 60063019 60063152 -25375328 - FLAM_A SINE Alu 0 133 1 4264 171 43 42 chr17 60063152 60064476 -25374004 - L1MB2 LINE L1 -460 5711 4378 376 288 56 0 chr17 60064630 60064755 -25373725 + MARNA DNA Mariner 439 570 -16 1942 131 13 42 chr17 60065146 60065278 -25373202 + AluSg SINE Alu 4 138 -172 2143 65 4 4 chr17 60065278 60065539 -25372941 + AluY SINE Alu 35 295 -16 1942 131 13 42 chr17 60065539 60065719 -25372761 + AluSg SINE Alu 138 307 -3 1201 236 51 12 chr17 60065775 60066109 -25372371 + L1M4 LINE L1 3803 4149 -1997 429 290 114 23 chr17 60066113 60066289 -25372191 - MLT1J LTR MaLR -317 194 3 2520 177 37 39 chr17 60066864 60067486 -25370994 - L1MB2 LINE L1 -2929 3217 2597 366 296 72 88 chr17 60067470 60068064 -25370416 - L1MEd LINE L1 -5008 1111 527 * 449 244 137 88 chr17 60068483 60068673 -25369807 - HAL1 LINE L1 -1230 1277 1098 2363 82 3 0 chr17 60068673 60068964 -25369516 + AluSp SINE Alu 5 296 -17 449 244 137 88 chr17 60068964 60069270 -25369210 - HAL1 LINE L1 -1409 1098 757 1618 149 34 65 chr17 60069300 60069621 -25368859 - AluJo SINE Alu -1 311 1 1804 202 22 0 chr17 60070010 60070327 -25368153 - MER7A DNA MER2_type -1 345 24 860 271 85 65 chr17 60070379 60070921 -25367559 + L1ME4a LINE L1 5482 6034 -87 432 284 72 15 chr17 60072284 60072439 -25366041 + MIR SINE MIR 1 163 -45 2363 62 45 0 chr17 60072535 60072824 -25365656 - AluY SINE Alu -9 302 1 2031 132 7 0 chr17 60072880 60073188 -25365292 - AluSx SINE Alu 0 310 1 3837 277 124 39 chr17 60073189 60073601 -25364879 + L2 LINE L2 1206 1582 -1731 1716 171 11 0 chr17 60073601 60073881 -25364599 - AluJb SINE Alu -29 283 1 1875 102 102 11 chr17 60073884 60074159 -25364321 - AluSc SINE Alu -9 300 1 3837 277 124 39 chr17 60074159 60074242 -25364238 + L2 LINE L2 1583 1658 -1655 2391 91 3 0 chr17 60074242 60074551 -25363929 + AluSq SINE Alu 1 310 -3 3837 277 124 39 chr17 60074551 60075166 -25363314 + L2 LINE L2 1658 2219 -1094 1622 165 64 0 chr17 60075166 60075432 -25363048 + AluJb SINE Alu 1 283 -29 279 0 0 0 chr17 60075433 60075464 -25363016 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 3837 277 124 39 chr17 60075464 60076282 -25362198 + L2 LINE L2 2218 3313 0 961 155 107 5 chr17 60076368 60076574 -25361906 - L1MB3 LINE L1 -7 6176 5950 268 231 0 64 chr17 60076666 60076744 -25361736 - L2 LINE L2 -5 3267 3195 321 140 0 0 chr17 60076858 60076907 -25361573 - MLT2B3 LTR ERVL 0 520 472 409 178 14 27 chr17 60076907 60076980 -25361500 + MER7A DNA MER2_type 3 74 -274 1902 163 33 24 chr17 60076980 60077187 -25361293 + MER7A DNA MER2_type 15 226 -2812 2174 123 88 18 chr17 60077187 60077527 -25360953 - THE1B LTR MaLR 0 364 1 1902 163 33 24 chr17 60077527 60077650 -25360830 + MER7A DNA MER2_type 226 346 0 2261 195 67 42 chr17 60077650 60078091 -25360389 - MLT2B3 LTR ERVL -41 508 64 2033 132 7 13 chr17 60078091 60078418 -25360062 + AluSx SINE Alu 1 312 0 2261 195 67 42 chr17 60078418 60078483 -25359997 - MLT2B3 LTR ERVL -485 64 2 2258 88 17 3 chr17 60078605 60078902 -25359578 - AluSq SINE Alu -12 301 1 916 163 50 0 chr17 60078912 60079072 -25359408 - AluJb SINE Alu -10 302 135 4434 159 20 29 chr17 60079073 60079791 -25358689 - L1MB5 LINE L1 -33 6141 5429 2490 71 0 0 chr17 60079791 60080088 -25358392 - AluY SINE Alu -14 297 1 4434 159 20 29 chr17 60080088 60080172 -25358308 - L1MB5 LINE L1 -745 5429 5346 1780 197 30 12 chr17 60080278 60080608 -25357872 + MER58B DNA MER1_type 2 337 -4 29 28 0 0 chr17 60081091 60081127 -25357353 + AT_rich Low_complexity Low_complexity 1 36 0 1801 136 22 48 chr17 60081180 60081496 -25356984 - AluJb SINE Alu -4 308 1 743 179 0 66 chr17 60082492 60082643 -25355837 + MER5B DNA MER1_type 38 178 0 302 102 0 20 chr17 60082819 60082868 -25355612 - L1MB4 LINE L1 -7 6173 6126 950 194 94 0 chr17 60082877 60083037 -25355443 - FAM SINE Alu 0 175 1 2285 88 3 26 chr17 60083046 60083351 -25355129 - AluSq SINE Alu -15 298 1 1507 105 125 62 chr17 60083352 60083656 -25354824 - L1MB3 LINE L1 -41 6142 5820 1065 135 0 0 chr17 60083658 60083829 -25354651 - FRAM SINE Alu 0 170 1 2213 108 3 0 chr17 60083839 60084136 -25354344 - AluY SINE Alu -13 298 1 810 149 17 6 chr17 60084141 60084294 -25354186 - L1PA15 LINE L1 -340 5825 5665 2239 92 27 3 chr17 60084688 60084983 -25353497 + AluSg SINE Alu 1 302 -8 2252 116 0 0 chr17 60085471 60085772 -25352708 + AluSq SINE Alu 1 301 -12 988 189 156 0 chr17 60086914 60087158 -25351322 - L1MB4 LINE L1 0 6180 5899 410 216 0 17 chr17 60087158 60087274 -25351206 + (TATATG)n Simple_repeat Simple_repeat 6 119 0 2411 70 0 10 chr17 60087276 60087575 -25350905 - AluSp SINE Alu -17 296 1 508 242 40 0 chr17 60087582 60087706 -25350774 - FLAM_A SINE Alu -4 129 1 1881 168 3 0 chr17 60087799 60088108 -25350372 - AluJb SINE Alu -2 310 1 490 208 0 0 chr17 60088108 60088205 -25350275 - L1MB4 LINE L1 -300 5878 5779 470 183 0 78 chr17 60088205 60088320 -25350160 - Tigger7 DNA MER2_type 0 2491 2386 * 2711 154 66 53 chr17 60088299 60088342 -25350138 - Tigger7 DNA MER2_type -212 521 480 2585 50 0 19 chr17 60088342 60088659 -25349821 - AluY SINE Alu 0 311 1 2172 119 0 13 chr17 60088667 60088978 -25349502 - AluSx SINE Alu -5 307 1 2711 154 66 53 chr17 60088978 60089438 -25349042 - Tigger7 DNA MER2_type -259 474 2 234 21 0 188 chr17 60089443 60089473 -25349007 - L1M4 LINE L1 -405 5779 5759 3298 143 64 4 chr17 60089473 60089970 -25348510 + MER1A DNA MER1_type 1 527 0 234 21 0 188 chr17 60089970 60089987 -25348493 - L1M4 LINE L1 -424 5760 5741 2330 57 11 0 chr17 60090002 60090303 -25348177 - AluSq SINE Alu 0 304 1 1748 140 20 45 chr17 60090306 60090598 -25347882 - AluJb SINE Alu -17 295 11 509 209 0 0 chr17 60090598 60090684 -25347796 - FRAM SINE Alu -55 121 36 1809 120 32 42 chr17 60090702 60091015 -25347465 - AluSx SINE Alu 0 311 2 2186 132 3 0 chr17 60091023 60091327 -25347153 - AluSx SINE Alu -7 305 1 2443 83 0 3 chr17 60092499 60092811 -25345669 - AluY SINE Alu 0 311 1 983 169 135 46 chr17 60092992 60093229 -25345251 + AluJo SINE Alu 1 258 -54 2537 59 0 0 chr17 60093294 60093599 -25344881 - AluY SINE Alu -6 305 1 1976 142 21 0 chr17 60093599 60093887 -25344593 - AluJb SINE Alu -18 294 1 1018 256 51 54 chr17 60094188 60094421 -25344059 + MLT1H1 LTR MaLR 1 234 -321 2376 90 0 0 chr17 60094421 60094720 -25343760 + AluSg SINE Alu 1 299 -11 1018 256 51 54 chr17 60094720 60094822 -25343658 + MLT1H1 LTR MaLR 234 335 -220 483 217 121 24 chr17 60094912 60095119 -25343361 + MLT1H1 LTR MaLR 316 542 0 22 0 0 0 chr17 60095574 60095596 -25342884 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr17 60096220 60096241 -25342239 + AT_rich Low_complexity Low_complexity 1 21 0 1798 114 121 0 chr17 60096902 60097166 -25341314 + AluSg SINE Alu 1 296 -4 1492 94 49 18 chr17 60097176 60097399 -25341081 - MER30 DNA MER1_type 0 230 1 32 26 0 0 chr17 60097428 60097467 -25341013 + AT_rich Low_complexity Low_complexity 1 39 0 2031 135 0 17 chr17 60097776 60098073 -25340407 - AluJb SINE Alu -20 292 1 2114 114 58 3 chr17 60098196 60098539 -25339941 - L1MC2 LINE L1 -8 6336 5975 2117 128 3 0 chr17 60098723 60099020 -25339460 + AluSc SINE Alu 5 302 -7 609 261 121 68 chr17 60099025 60099454 -25339026 - LTR33A LTR ERVL -65 458 7 1759 187 33 94 chr17 60099526 60099587 -25338893 - L1ME2 LINE L1 -5 6159 6096 1081 151 18 0 chr17 60099587 60099753 -25338727 - FAM SINE Alu -6 169 1 1759 187 33 94 chr17 60099753 60100268 -25338212 - L1ME2 LINE L1 -68 6096 5618 2648 45 0 0 chr17 60100460 60100771 -25337709 - AluY SINE Alu 0 311 1 700 150 71 0 chr17 60100789 60100902 -25337578 - FLAM_C SINE Alu -12 121 1 2383 93 0 6 chr17 60102225 60102538 -25335942 + AluSq SINE Alu 1 311 -2 340 244 74 81 chr17 60102643 60102748 -25335732 + MIR SINE MIR 38 141 -120 2340 72 10 0 chr17 60102748 60103041 -25335439 + AluSq SINE Alu 1 296 -17 340 244 74 81 chr17 60103041 60103097 -25335383 + MIR SINE MIR 141 196 -65 23 33 0 0 chr17 60103818 60103848 -25334632 + GC_rich Low_complexity Low_complexity 1 30 0 426 127 0 0 chr17 60104115 60104186 -25334294 + (CCCGAA)n Simple_repeat Simple_repeat 3 73 0 270 230 0 0 chr17 60104256 60104330 -25334150 + GA-rich Low_complexity Low_complexity 1 74 0 238 241 0 0 chr17 60104370 60104424 -25334056 + (CCG)n Simple_repeat Simple_repeat 2 55 0 210 292 0 54 chr17 60104668 60104798 -25333682 + C-rich Low_complexity Low_complexity 2 124 0 270 182 0 15 chr17 60105893 60105959 -25332521 - L1ME4a LINE L1 -76 6045 5981 2291 88 3 0 chr17 60106280 60106574 -25331906 + AluSg SINE Alu 1 295 -15 1759 148 37 7 chr17 60106830 60107101 -25331379 + AluSx SINE Alu 2 280 -32 912 152 79 18 chr17 60107132 60107297 -25331183 + AluJb SINE Alu 118 292 -20 264 334 195 24 chr17 60108089 60108556 -25329924 + L2 LINE L2 2028 2574 -740 697 245 76 65 chr17 60108787 60109104 -25329376 - MER77 LTR ERV1 -4 601 304 411 191 12 24 chr17 60109107 60109191 -25329289 - FLAM_A SINE Alu -15 127 45 329 242 15 39 chr17 60109221 60109390 -25329090 - MER77 LTR ERV1 -337 268 53 324 312 34 104 chr17 60109509 60109807 -25328673 + L2 LINE L2 2835 3111 -161 962 271 107 33 chr17 60109874 60110248 -25328232 + Charlie7 DNA MER1_type 1 417 -2195 1535 144 140 0 chr17 60110248 60110505 -25327975 + AluJo SINE Alu 1 293 -9 962 271 107 33 chr17 60110505 60110588 -25327892 + Charlie7 DNA MER1_type 417 492 -2120 2756 7 0 3 chr17 60110647 60110949 -25327531 + AluYa5 SINE Alu 1 301 -10 356 271 33 0 chr17 60110993 60111115 -25327365 - L1ME4a LINE L1 -318 5852 5727 1259 239 55 41 chr17 60111126 60111490 -25326990 - MLT1J1 LTR MaLR -8 438 70 314 283 178 5 chr17 60111583 60111769 -25326711 - L1ME4a LINE L1 -470 5692 5493 1266 167 44 7 chr17 60111980 60112273 -25326207 - MER33 DNA MER1_type -7 317 14 26 0 0 0 chr17 60112361 60112387 -25326093 + AT_rich Low_complexity Low_complexity 1 26 0 237 182 0 0 chr17 60112452 60112496 -25325984 + Alu SINE Alu 2 45 -255 822 174 0 0 chr17 60112501 60112633 -25325847 - AluJo/FRAM SINE Alu -46 266 135 1783 159 83 7 chr17 60112635 60112925 -25325555 - AluJb SINE Alu 0 312 1 2276 120 3 0 chr17 60113198 60113507 -25324973 - AluSg SINE Alu 0 310 1 2208 121 3 0 chr17 60113905 60114211 -25324269 - AluSx SINE Alu -5 307 1 2427 89 0 0 chr17 60114228 60114531 -25323949 - AluSg SINE Alu -7 303 1 243 0 0 0 chr17 60114638 60114665 -25323815 + (CA)n Simple_repeat Simple_repeat 2 28 0 484 286 70 40 chr17 60115215 60115414 -25323066 - MIR SINE MIR -27 235 31 273 404 0 0 chr17 60115513 60115622 -25322858 + L2 LINE L2 2568 2676 -638 2331 71 3 0 chr17 60115668 60115973 -25322507 - AluSp SINE Alu 0 306 1 2080 129 0 3 chr17 60115988 60116283 -25322197 - AluSx SINE Alu -18 294 1 707 162 17 8 chr17 60116294 60116411 -25322069 - FLAM_C SINE Alu -15 118 1 194 288 38 38 chr17 60116417 60116497 -25321983 + L2 LINE L2 2894 2973 -299 2227 126 3 0 chr17 60116690 60117000 -25321480 - AluSp SINE Alu -2 311 1 1706 149 0 68 chr17 60117344 60117652 -25320828 + AluJb SINE Alu 1 287 -25 2200 146 0 0 chr17 60117776 60118084 -25320396 + AluSx SINE Alu 1 308 -4 852 199 12 6 chr17 60118411 60118572 -25319908 + FAM SINE Alu 1 162 -13 2193 98 0 0 chr17 60118887 60119164 -25319316 - AluSc SINE Alu -10 299 23 200 163 23 0 chr17 60119270 60119313 -25319167 + T-rich Low_complexity Low_complexity 2 45 0 1224 293 68 23 chr17 60119341 60119358 -25319122 - HAL1 LINE L1 -116 2391 2376 2243 113 3 0 chr17 60119358 60119668 -25318812 - AluSp SINE Alu -2 311 1 1224 293 68 23 chr17 60119668 60119938 -25318542 - HAL1 LINE L1 -131 2376 2120 2452 81 3 0 chr17 60119938 60120246 -25318234 - AluSp SINE Alu -4 309 1 1224 293 68 23 chr17 60120246 60120646 -25317834 - HAL1 LINE L1 -387 2120 1672 310 212 8 102 chr17 60120682 60120800 -25317680 - HAL1 LINE L1 -823 1684 1578 363 197 0 0 chr17 60120803 60120864 -25317616 + AluS SINE Alu 1 61 -242 2235 120 0 0 chr17 60121028 60121329 -25317151 + AluSx SINE Alu 1 301 -11 325 254 113 6 chr17 60121778 60121955 -25316525 + L1MC4a LINE L1 5199 5394 -752 1387 133 43 5 chr17 60122032 60122242 -25316238 - AluJb SINE Alu -94 218 1 489 302 57 35 chr17 60122274 60122592 -25315888 + L1MC4a LINE L1 5549 5873 -1935 325 259 74 0 chr17 60122888 60122996 -25315484 - MER112 DNA MER1_type -11 249 134 2250 101 14 3 chr17 60122996 60123293 -25315187 + AluSq SINE Alu 1 300 -13 1907 116 0 0 chr17 60123437 60123688 -25314792 + AluSc SINE Alu 45 295 -14 26 0 0 0 chr17 60124032 60124058 -25314422 + AT_rich Low_complexity Low_complexity 1 26 0 2202 131 0 0 chr17 60124204 60124509 -25313971 + AluSx SINE Alu 1 305 -7 425 203 22 22 chr17 60124588 60124726 -25313754 + L1MC5 LINE L1 7099 7236 -725 21 0 0 0 chr17 60124802 60124823 -25313657 + AT_rich Low_complexity Low_complexity 1 21 0 2433 77 3 0 chr17 60124857 60125154 -25313326 + AluSc SINE Alu 1 298 -11 226 152 152 0 chr17 60125154 60125220 -25313260 + L1MC5 LINE L1 7264 7339 -622 1132 185 49 0 chr17 60125223 60125488 -25312992 + MER33 DNA MER1_type 25 302 -22 430 239 45 19 chr17 60125523 60125678 -25312802 + L1MC5 LINE L1 7330 7488 -473 1440 174 50 14 chr17 60125679 60125961 -25312519 + AluJb SINE Alu 1 292 -20 1673 158 41 38 chr17 60125973 60126264 -25312216 + AluJo SINE Alu 1 292 -20 323 213 88 73 chr17 60126264 60126400 -25312080 + L1MC5 LINE L1 7654 7791 -170 900 170 18 81 chr17 60126518 60126741 -25311739 + L1MB7 LINE L1 5972 6180 -4 237 250 18 0 chr17 60126760 60126816 -25311664 + CT-rich Low_complexity Low_complexity 1 57 0 481 266 125 27 chr17 60126842 60127289 -25311191 + L1M4 LINE L1 4408 4898 -1248 720 285 54 14 chr17 60127322 60127763 -25310717 - L1ME LINE L1 -521 5641 5170 617 195 8 0 chr17 60127763 60127886 -25310594 - L1MB7 LINE L1 -19 6165 6042 301 179 119 24 chr17 60128150 60128234 -25310246 - L1MC5 LINE L1 -37 7924 7833 2202 105 3 22 chr17 60128358 60128673 -25309807 + AluSg SINE Alu 1 309 -1 2178 112 0 32 chr17 60129478 60129790 -25308690 - AluSx SINE Alu -10 302 1 262 351 105 21 chr17 60130232 60130517 -25307963 + L3 LINE CR1 661 969 -608 301 288 0 0 chr17 60130697 60130770 -25307710 + L3 LINE CR1 1360 1432 -145 2151 113 0 10 chr17 60130788 60131089 -25307391 - AluSx SINE Alu -14 298 1 239 0 32 0 chr17 60131089 60131120 -25307360 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 2045 114 4 4 chr17 60131120 60131401 -25307079 - AluSx SINE Alu -31 281 1 1999 156 61 52 chr17 60131497 60131583 -25306897 - L1M4 LINE L1 -753 5393 5309 2337 88 0 28 chr17 60131583 60131901 -25306579 - AluSc SINE Alu 0 309 1 1999 156 61 52 chr17 60131901 60132335 -25306145 - L1M4 LINE L1 -837 5309 4868 1393 172 109 4 chr17 60132362 60132537 -25305943 - AluJo SINE Alu 0 322 167 288 0 0 0 chr17 60132537 60132569 -25305911 + (TA)n Simple_repeat Simple_repeat 1 32 0 1393 172 109 4 chr17 60132569 60132688 -25305792 - AluJo SINE Alu -155 167 1 30 0 0 0 chr17 60132693 60132723 -25305757 + AT_rich Low_complexity Low_complexity 1 30 0 4127 154 11 39 chr17 60132759 60133094 -25305386 - MER44D DNA MER2_type -1889 598 422 2472 67 0 0 chr17 60133094 60133392 -25305088 - AluY SINE Alu -13 298 1 4127 154 11 39 chr17 60133392 60133803 -25304677 - MER44D DNA MER2_type -2065 422 1 354 306 81 11 chr17 60133832 60134018 -25304462 - L1ME4a LINE L1 -288 5833 5635 406 292 44 9 chr17 60134200 60134313 -25304167 - MIR SINE MIR -110 152 36 213 121 0 0 chr17 60134451 60134484 -25303996 + (T)n Simple_repeat Simple_repeat 1 33 0 2543 65 3 0 chr17 60134705 60135015 -25303465 + AluY SINE Alu 1 311 0 294 291 25 0 chr17 60135471 60135550 -25302930 - 7SK RNA RNA -112 81 1 198 0 0 0 chr17 60136275 60136297 -25302183 + (TA)n Simple_repeat Simple_repeat 1 22 0 211 289 79 13 chr17 60136574 60136650 -25301830 - L2 LINE L2 -18 3254 3174 1278 193 34 21 chr17 60136650 60136889 -25301591 - AluJo SINE Alu -69 243 2 771 248 140 73 chr17 60137005 60137429 -25301051 + MLT1H1 LTR MaLR 32 493 -62 2240 101 0 7 chr17 60137429 60137726 -25300754 - AluSx SINE Alu -17 295 1 771 248 140 73 chr17 60137726 60137780 -25300700 + MLT1H1 LTR MaLR 493 542 -13 203 342 89 0 chr17 60137923 60138002 -25300478 + L2 LINE L2 3137 3222 -50 1773 142 7 34 chr17 60138777 60139183 -25299297 - AluJb SINE Alu 0 398 1 2395 96 13 0 chr17 60139279 60139582 -25298898 - AluSc SINE Alu -2 307 1 25 40 0 20 chr17 60139874 60139897 -25298583 + AT_rich Low_complexity Low_complexity 1 23 -26 2398 75 0 3 chr17 60139897 60140190 -25298290 - AluY SINE Alu -19 292 1 25 40 0 20 chr17 60140190 60140216 -25298264 + AT_rich Low_complexity Low_complexity 23 49 0 1661 168 42 3 chr17 60140382 60140533 -25297947 - AluJo SINE Alu -16 296 152 1732 126 0 8 chr17 60140533 60140779 -25297701 - AluSq SINE Alu -69 244 1 1661 168 42 3 chr17 60140779 60140912 -25297568 - AluJo SINE Alu -160 152 1 22 0 0 0 chr17 60140913 60140935 -25297545 + AT_rich Low_complexity Low_complexity 1 22 0 1799 106 23 0 chr17 60140951 60141207 -25297273 - L1PA15 LINE L1 -8 6157 5896 2224 81 44 0 chr17 60141328 60141624 -25296856 + AluSc SINE Alu 1 309 0 351 385 95 0 chr17 60141770 60141918 -25296562 - L2 LINE L2 -4 3268 3107 624 245 38 31 chr17 60141967 60142126 -25296354 - MIR SINE MIR -101 161 2 2403 79 3 0 chr17 60142149 60142440 -25296040 + AluSc SINE Alu 1 292 -17 340 351 23 8 chr17 60142509 60142640 -25295840 - L2 LINE L2 -238 3034 2902 248 340 100 89 chr17 60143404 60143663 -25294817 + L2 LINE L2 3006 3267 -5 317 233 33 153 chr17 60143698 60143852 -25294628 + MER5A DNA MER1_type 1 123 -66 2166 109 0 0 chr17 60143852 60144135 -25294345 + AluSq SINE Alu 1 283 -30 317 233 33 153 chr17 60144135 60144195 -25294285 + MER5A DNA MER1_type 123 189 0 2066 108 0 0 chr17 60144828 60145107 -25293373 - AluSc SINE Alu -14 295 17 829 305 66 0 chr17 60145171 60145397 -25293083 - MIR SINE MIR -21 241 1 2910 13 0 0 chr17 60145605 60145922 -25292558 + AluYb8 SINE Alu 1 317 -1 194 0 39 0 chr17 60146000 60146026 -25292454 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1810 129 50 11 chr17 60146026 60146306 -25292174 + AluJo SINE Alu 1 291 -21 1518 172 31 35 chr17 60146922 60147212 -25291268 + AluJo SINE Alu 1 289 -23 360 250 138 35 chr17 60147729 60147845 -25290635 + L2 LINE L2 3181 3308 -5 826 205 0 26 chr17 60147915 60148071 -25290409 - AluJb SINE Alu -26 286 135 2181 123 0 0 chr17 60148071 60148371 -25290109 - AluSx SINE Alu -12 300 1 1792 145 0 78 chr17 60148374 60148705 -25289775 - AluSx SINE Alu -7 305 1 1078 38 6 88 chr17 60149385 60149415 -25289065 + L1PB1 LINE L1 6005 6036 -115 2310 96 3 0 chr17 60149415 60149716 -25288764 + AluSp SINE Alu 1 302 -11 1078 38 6 88 chr17 60149716 60149845 -25288635 + L1PB1 LINE L1 6036 6151 0 21 0 0 0 chr17 60149847 60149868 -25288612 + AT_rich Low_complexity Low_complexity 1 21 0 1960 89 75 29 chr17 60149868 60150217 -25288263 + L1MA4A LINE L1 5937 6301 -2 1809 179 10 0 chr17 60150737 60151044 -25287436 + AluJo SINE Alu 1 310 -2 741 219 115 0 chr17 60151259 60151442 -25287038 + MER20 DNA MER1_type 1 204 -15 6411 170 11 40 chr17 60151442 60152874 -25285606 + L1 LINE L1 3707 5095 -1051 2119 136 0 10 chr17 60152907 60153215 -25285265 + AluSx SINE Alu 1 305 -7 2193 110 0 7 chr17 60153224 60153524 -25284956 + AluSc SINE Alu 1 298 -11 2203 232 251 40 chr17 60153538 60154843 -25283637 + L1ME2 LINE L1 2367 3947 -2199 2689 207 60 67 chr17 60154864 60155085 -25283395 + L1ME2 LINE L1 4518 4739 -1425 1832 147 3 23 chr17 60155085 60155221 -25283259 + AluJb SINE Alu 1 138 -174 2216 112 0 3 chr17 60155221 60155516 -25282964 + AluSx SINE Alu 1 294 -18 1832 147 3 23 chr17 60155516 60155678 -25282802 + AluJb SINE Alu 138 293 -19 2689 207 60 67 chr17 60155678 60155970 -25282510 + L1ME2 LINE L1 4739 5031 -1133 2169 136 3 7 chr17 60155970 60156280 -25282200 + AluSx SINE Alu 1 309 -3 2689 207 60 67 chr17 60156280 60156442 -25282038 + L1ME2 LINE L1 5031 5193 -971 2354 92 13 0 chr17 60156442 60156745 -25281735 + AluSg SINE Alu 1 307 -3 2689 207 60 67 chr17 60156745 60157746 -25280734 + L1ME2 LINE L1 5193 6163 -1 2173 106 10 7 chr17 60157847 60158139 -25280341 - AluSq SINE Alu -20 293 1 1920 125 29 45 chr17 60158377 60158688 -25279792 - AluSx SINE Alu -6 306 1 402 304 20 0 chr17 60160296 60160398 -25278082 + MIR SINE MIR 48 151 -111 1088 201 0 44 chr17 60160474 60160703 -25277777 - MER58A DNA MER1_type 0 224 6 29 60 0 0 chr17 60161766 60161816 -25276664 + AT_rich Low_complexity Low_complexity 1 50 0 2332 106 0 0 chr17 60161843 60162145 -25276335 - AluSg SINE Alu -8 302 1 3252 123 19 48 chr17 60162203 60162557 -25275923 - L1MB4 LINE L1 -13 6167 5804 507 17 0 0 chr17 60162557 60162617 -25275863 + (TA)n Simple_repeat Simple_repeat 2 61 0 1705 168 17 10 chr17 60162617 60162915 -25275565 - AluJb SINE Alu -12 300 1 3252 123 19 48 chr17 60162915 60163187 -25275293 - L1MB4 LINE L1 -374 5806 5558 2333 46 43 0 chr17 60163578 60163860 -25274620 - AluY SINE Alu -17 294 1 469 243 53 90 chr17 60163982 60164171 -25274309 - MIR SINE MIR -15 247 66 226 309 0 0 chr17 60164621 60164676 -25273804 + L2 LINE L2 3251 3305 -8 621 252 7 7 chr17 60164677 60164820 -25273660 + FAM SINE Alu 1 143 -42 2066 125 7 10 chr17 60164965 60165270 -25273210 - AluSx SINE Alu -8 304 1 2379 127 38 35 chr17 60165331 60165576 -25272904 - MSTA LTR MaLR 0 428 179 2000 131 0 0 chr17 60165576 60165897 -25272583 + AluSx SINE Alu 1 321 0 2379 127 38 35 chr17 60165897 60166077 -25272403 - MSTA LTR MaLR -249 179 1 687 268 36 40 chr17 60166080 60166330 -25272150 + MIR SINE MIR 11 259 -3 33 43 0 0 chr17 60166587 60166634 -25271846 + AT_rich Low_complexity Low_complexity 1 47 0 30 0 0 0 chr17 60166862 60166892 -25271588 + AT_rich Low_complexity Low_complexity 1 30 0 249 57 0 0 chr17 60166905 60166940 -25271540 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2461 49 0 0 chr17 60166944 60167231 -25271249 - AluY SINE Alu -24 287 1 467 0 35 0 chr17 60168141 60168199 -25270281 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2333 84 0 0 chr17 60169547 60169851 -25268629 - AluY SINE Alu 0 304 1 24 32 0 0 chr17 60170039 60170070 -25268410 + AT_rich Low_complexity Low_complexity 1 31 0 2299 68 3 62 chr17 60170404 60170729 -25267751 - AluY SINE Alu -5 306 1 544 147 0 0 chr17 60170797 60170899 -25267581 + L1PB1 LINE L1 5946 6047 -104 1750 74 5 0 chr17 60170999 60171214 -25267266 - AluY SINE Alu -95 216 1 258 235 0 29 chr17 60171214 60171282 -25267198 - HAL1 LINE L1 -983 1524 1459 2110 142 3 0 chr17 60171283 60171593 -25266887 - AluSx SINE Alu -1 311 1 2195 123 3 3 chr17 60171607 60171909 -25266571 - AluY SINE Alu -1 310 9 366 326 96 38 chr17 60171993 60172524 -25265956 - HAL1 LINE L1 -1945 562 1 990 324 93 5 chr17 60172543 60172950 -25265530 - L3 LINE CR1 -110 1467 1025 4373 143 28 80 chr17 60173221 60173417 -25265063 - L1PA16 LINE L1 -10 6349 6144 1543 151 7 47 chr17 60173417 60173696 -25264784 - AluSx SINE Alu -6 306 39 4373 143 28 80 chr17 60173696 60174685 -25263795 - L1PA16 LINE L1 -215 6144 5320 186 43 0 0 chr17 60174743 60174766 -25263714 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2851 224 35 20 chr17 60174830 60175667 -25262813 - L1M4 LINE L1 -816 5330 4476 1872 171 0 13 chr17 60175667 60175971 -25262509 + AluJb SINE Alu 1 300 -12 2851 224 35 20 chr17 60175971 60176068 -25262412 - L1M4 LINE L1 -1670 4476 4382 21 36 0 0 chr17 60176118 60176146 -25262334 + AT_rich Low_complexity Low_complexity 1 28 0 772 177 8 8 chr17 60176148 60176272 -25262208 + FLAM_C SINE Alu 3 126 -17 1526 122 0 14 chr17 60176282 60176503 -25261977 + AluJo SINE Alu 91 308 -4 469 115 90 0 chr17 60176507 60176585 -25261895 + U6 snRNA snRNA 1 85 -22 541 246 22 58 chr17 60176607 60176745 -25261735 - MIR SINE MIR -128 134 2 731 145 73 0 chr17 60176957 60177081 -25261399 + AluJo SINE Alu 1 133 -169 233 103 0 26 chr17 60177081 60177120 -25261360 - Alu SINE Alu -93 40 3 1037 164 5 58 chr17 60177120 60177327 -25261153 + AluJo SINE Alu 116 311 -1 339 25 0 0 chr17 60177365 60177405 -25261075 + (CA)n Simple_repeat Simple_repeat 2 41 0 2014 151 0 0 chr17 60177544 60177842 -25260638 - AluSx SINE Alu -14 298 1 5123 176 41 40 chr17 60178080 60179237 -25259243 + L1MC3 LINE L1 4978 5067 -1079 633 163 0 128 chr17 60179237 60179378 -25259102 + FLAM_A SINE Alu 5 127 -6 5123 176 41 40 chr17 60179378 60179714 -25258766 + L1MC3 LINE L1 5067 5401 -745 852 209 80 4 chr17 60179719 60179944 -25258536 + L1MC3 LINE L1 6404 6645 -1140 2087 219 67 20 chr17 60179973 60180509 -25257971 - MER77 LTR ERV1 -7 598 63 3136 166 92 114 chr17 60180513 60180829 -25257651 + L1MC3 LINE L1 6691 7013 -772 1285 191 129 35 chr17 60180829 60181170 -25257310 - MER83C LTR ERV1 0 373 1 3136 166 92 114 chr17 60181170 60181267 -25257213 + L1MC3 LINE L1 7013 7111 -674 266 194 56 28 chr17 60181267 60181339 -25257141 + MLT1F1 LTR MaLR 35 108 -459 3136 166 92 114 chr17 60181339 60181566 -25256914 + L1MC3 LINE L1 7111 7342 -443 2027 119 0 63 chr17 60181566 60181747 -25256733 - AluSx SINE Alu -13 299 145 2209 125 0 3 chr17 60181747 60182051 -25256429 - AluSg SINE Alu -7 303 1 2027 119 0 63 chr17 60182051 60182188 -25256292 - AluSx SINE Alu -167 145 1 3136 166 92 114 chr17 60182188 60182567 -25255913 + L1MC3 LINE L1 7342 7758 -27 1057 106 0 0 chr17 60182567 60182699 -25255781 + AluSx SINE Alu 1 132 -181 2189 113 3 3 chr17 60182701 60182994 -25255486 + AluSq SINE Alu 1 293 -20 21 36 0 0 chr17 60183009 60183037 -25255443 + AT_rich Low_complexity Low_complexity 1 28 0 1835 80 6 130 chr17 60183047 60183385 -25255095 + AluY SINE Alu 1 296 -15 1106 126 40 11 chr17 60183402 60183576 -25254904 + AluSx SINE Alu 122 300 -12 1678 161 3 21 chr17 60183587 60183895 -25254585 + AluJb SINE Alu 1 303 0 22 56 0 0 chr17 60184329 60184365 -25254115 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr17 60184410 60184432 -25254048 + AT_rich Low_complexity Low_complexity 1 22 0 3023 166 34 37 chr17 60185361 60185717 -25252763 - L1MB3 LINE L1 0 6183 5828 2214 114 3 0 chr17 60185717 60186025 -25252455 - AluSx SINE Alu -3 309 1 3023 166 34 37 chr17 60186025 60186311 -25252169 - L1MB3 LINE L1 -355 5828 5543 10586 50 1 2 chr17 60186315 60188412 -25250068 - L1PA5 LINE L1 -1 6153 4059 2171 112 48 25 chr17 60238778 60239134 -25199346 + THE1B LTR MaLR 1 364 0 3218 110 6 0 chr17 60239134 60239624 -25198856 + THE1B-int LTR MaLR 1 493 -1087 574 161 0 0 chr17 60239727 60239814 -25198666 + AluSg/x SINE Alu 209 295 -17 188 242 113 81 chr17 60239820 60239882 -25198598 + MER5B DNA MER1_type 101 164 -14 1573 98 5 5 chr17 60240141 60240355 -25198125 - AluSp SINE Alu -99 214 1 583 239 75 26 chr17 60240466 60240741 -25197739 - L1ME3A LINE L1 -46 6116 5819 1223 171 0 32 chr17 60240741 60240957 -25197523 - AluSg/x SINE Alu -3 309 101 1584 12 0 0 chr17 60241125 60241297 -25197183 - AluYa5 SINE Alu -16 295 124 24 0 0 0 chr17 60241596 60241620 -25196860 + AT_rich Low_complexity Low_complexity 1 24 0 2351 70 3 0 chr17 60242063 60242348 -25196132 + AluSq SINE Alu 1 286 -27 423 0 0 0 chr17 60242348 60242395 -25196085 + (CAAAT)n Simple_repeat Simple_repeat 2 48 0 280 186 43 14 chr17 60243306 60243376 -25195104 - L1ME3A LINE L1 -385 5777 5706 2169 87 37 7 chr17 60243380 60243680 -25194800 + AluSg SINE Alu 1 309 -1 838 170 57 0 chr17 60244036 60244177 -25194303 + AluJo SINE Alu 3 151 -161 348 83 0 0 chr17 60244356 60244404 -25194076 + (TG)n Simple_repeat Simple_repeat 2 49 0 830 152 0 0 chr17 60244409 60244534 -25193946 - FRAM SINE Alu -30 146 22 2076 126 0 7 chr17 60244739 60245055 -25193425 + AluSx SINE Alu 1 314 0 2531 77 0 0 chr17 60245185 60245496 -25192984 + AluY SINE Alu 1 311 0 2581 200 67 32 chr17 60245506 60246190 -25192290 - L1MC3 LINE L1 -10 7775 7068 191 268 0 49 chr17 60246339 60246380 -25192100 + L2 LINE L2 3233 3271 -42 328 310 80 0 chr17 60246400 60246513 -25191967 + L2 LINE L2 3190 3311 -2 988 165 0 13 chr17 60246750 60246908 -25191572 - AluSg/x SINE Alu -46 266 111 1645 159 0 8 chr17 60246907 60247158 -25191322 - AluSx SINE Alu -63 249 1 1674 148 96 0 chr17 60247642 60247913 -25190567 - AluJo SINE Alu -15 297 1 2308 78 7 29 chr17 60248306 60248615 -25189865 + AluSq SINE Alu 1 302 -11 226 300 133 38 chr17 60249417 60249764 -25188716 - HAL1b LINE L1 -748 600 221 21 57 0 0 chr17 60250236 60250271 -25188209 + AT_rich Low_complexity Low_complexity 1 35 0 566 230 18 12 chr17 60250897 60251062 -25187418 - Charlie1 DNA MER1_type -219 2542 2377 629 207 0 0 chr17 60251066 60251201 -25187279 - L1MB7 LINE L1 -92 6092 5958 639 175 30 30 chr17 60251203 60251369 -25187111 - Charlie1 DNA MER1_type -411 2350 2185 2684 252 29 19 chr17 60251379 60252150 -25186330 + L1MEc LINE L1 40 817 -5579 427 164 0 0 chr17 60252154 60252221 -25186259 + AluJ/FLAM SINE Alu 2 68 -244 1348 139 32 5 chr17 60252323 60252539 -25185941 + AluJb SINE Alu 91 312 0 453 213 32 11 chr17 60252540 60252634 -25185846 + 7SLRNA srpRNA srpRNA 203 298 -22 3379 236 57 8 chr17 60252647 60253491 -25184989 - L1M2c LINE L1 -5039 1750 866 2152 117 16 7 chr17 60253501 60253808 -25184672 - AluSg SINE Alu 0 310 1 1132 319 127 52 chr17 60254003 60254033 -25184447 + L2 LINE L2 2157 2183 -1130 2107 171 71 15 chr17 60254033 60254442 -25184038 - MSTB1 LTR MaLR 0 432 1 1132 319 127 52 chr17 60254442 60254581 -25183899 + L2 LINE L2 2183 2310 -1003 2285 94 13 3 chr17 60254581 60254879 -25183601 - AluSq SINE Alu -12 301 1 1132 319 127 52 chr17 60254879 60255431 -25183049 + L2 LINE L2 2310 2819 -494 2175 135 0 7 chr17 60255431 60255734 -25182746 + AluSx SINE Alu 1 301 -11 1132 319 127 52 chr17 60255734 60255922 -25182558 + L2 LINE L2 2819 2991 -322 2285 102 3 0 chr17 60255922 60256225 -25182255 + AluSp SINE Alu 6 309 -4 1132 319 127 52 chr17 60256225 60256360 -25182120 + L2 LINE L2 2991 3305 -8 2141 119 13 10 chr17 60256989 60257300 -25181180 + AluSx SINE Alu 1 312 0 21 0 0 0 chr17 60257372 60257393 -25181087 + AT_rich Low_complexity Low_complexity 1 21 0 1742 152 46 0 chr17 60258706 60258969 -25179511 + AluJo SINE Alu 11 285 -27 417 152 0 54 chr17 60259032 60259124 -25179356 - AluJ/FRAM SINE Alu -3 309 223 417 177 0 0 chr17 60259225 60259287 -25179193 - AluS SINE Alu -248 62 1 22 0 0 0 chr17 60259295 60259317 -25179163 + AT_rich Low_complexity Low_complexity 1 22 0 10685 167 83 15 chr17 60259338 60259604 -25178876 - L1MCa LINE L1 -3009 3417 3171 1892 139 0 32 chr17 60259604 60259913 -25178567 + AluY SINE Alu 1 299 -12 10685 167 83 15 chr17 60259913 60260716 -25177764 - L1MCa LINE L1 -3255 3171 2424 2135 121 7 10 chr17 60260716 60261022 -25177458 - AluSg SINE Alu -2 308 4 10685 167 83 15 chr17 60261022 60261080 -25177400 - L1MCa LINE L1 -4002 2424 2371 2180 137 0 0 chr17 60261080 60261386 -25177094 - AluSq SINE Alu -7 306 1 10685 167 83 15 chr17 60261386 60261921 -25176559 - L1MCa LINE L1 -4055 2371 1874 1456 185 56 7 chr17 60261921 60262191 -25176289 - AluJo SINE Alu -29 283 1 10685 167 83 15 chr17 60262191 60262562 -25175918 - L1MCa LINE L1 -4552 1874 1530 1712 113 98 0 chr17 60262562 60262818 -25175662 - AluSq SINE Alu 0 313 33 10685 167 83 15 chr17 60262818 60263979 -25174501 - L1MCa LINE L1 -4896 1530 6 499 250 0 0 chr17 60264325 60264425 -25174055 - L2 LINE L2 0 3313 3214 1433 192 47 71 chr17 60264509 60264979 -25173501 - LTR10B LTR ERV1 0 547 1 891 280 22 13 chr17 60264979 60265204 -25173276 - L2 LINE L2 -255 3058 2832 2417 194 54 44 chr17 60265227 60265956 -25172524 + MER21B LTR ERV1 12 833 -30 248 172 0 0 chr17 60266035 60266093 -25172387 - L1MD3 LINE L1 -5 7990 7933 2152 182 81 75 chr17 60266096 60266766 -25171714 - LTR8 LTR ERV1 -2 689 16 1553 228 28 20 chr17 60266799 60267199 -25171281 - L1MD3 LINE L1 -50 7945 7543 253 187 132 55 chr17 60267199 60267290 -25171190 + MLT1F1 LTR MaLR 34 131 -436 380 127 28 42 chr17 60267290 60267361 -25171119 + L1MD3 LINE L1 7438 7507 -488 209 268 0 0 chr17 60267587 60267628 -25170852 + polypurine Low_complexity Low_complexity 5 45 0 4032 91 9 0 chr17 60267692 60268241 -25170239 - MER41A LTR ERV1 0 554 1 237 282 150 12 chr17 60268476 60268589 -25169891 + MIR SINE MIR 30 154 -63 705 175 0 16 chr17 60268658 60268784 -25169696 - FLAM_A SINE Alu -11 131 8 206 304 114 0 chr17 60268874 60268953 -25169527 + MIR SINE MIR 162 249 -13 1091 154 0 0 chr17 60269125 60269287 -25169193 + AluJb SINE Alu 135 296 -16 438 299 9 9 chr17 60269293 60269400 -25169080 + L3 LINE CR1 1461 1567 -10 2322 103 0 0 chr17 60269579 60269880 -25168600 + AluSx SINE Alu 5 305 -7 2131 98 3 3 chr17 60271192 60271477 -25167003 + AluSx SINE Alu 22 306 -6 258 172 0 69 chr17 60272002 60272060 -25166420 - L2 LINE L2 0 3272 3219 402 172 211 16 chr17 60272097 60272150 -25166330 - L1MD3 LINE L1 -8 7987 7946 2333 105 0 3 chr17 60272150 60272456 -25166024 + AluSp SINE Alu 1 305 -8 402 172 211 16 chr17 60272456 60272530 -25165950 - L1MD3 LINE L1 -49 7946 7835 882 199 60 68 chr17 60272535 60272801 -25165679 - L2 LINE L2 -608 2706 2443 1036 262 76 0 chr17 60272871 60273199 -25165281 + L2 LINE L2 639 991 -2323 2681 238 93 27 chr17 60273218 60274042 -25164438 - L2 LINE L2 -877 2437 1559 747 179 0 0 chr17 60274048 60274196 -25164284 + FLAM_C SINE Alu 1 148 0 871 109 0 8 chr17 60274210 60274329 -25164151 + AluJb SINE Alu 183 300 -12 360 285 52 52 chr17 60274332 60274405 -25164075 - L2 LINE L2 -1753 1561 1489 2487 81 3 0 chr17 60274405 60274712 -25163768 + AluSx SINE Alu 1 308 -4 360 285 52 52 chr17 60274712 60274810 -25163670 - L2 LINE L2 -1824 1490 1390 374 304 61 0 chr17 60274836 60274951 -25163529 - L2 LINE L2 -2037 1277 1156 1683 165 0 4 chr17 60274951 60275200 -25163280 - AluJo SINE Alu -64 248 1 21 0 0 0 chr17 60275264 60275285 -25163195 + AT_rich Low_complexity Low_complexity 1 21 0 1870 93 0 4 chr17 60275333 60275569 -25162911 - AluSc SINE Alu -15 294 60 2015 183 0 0 chr17 60275649 60275961 -25162519 + AluSx SINE Alu 1 312 0 1397 185 20 66 chr17 60275985 60276109 -25162371 + AluJo SINE Alu 9 137 -175 2357 80 13 17 chr17 60276109 60276410 -25162070 + AluSx SINE Alu 1 300 -12 1397 185 20 66 chr17 60276410 60276557 -25161923 + AluJo SINE Alu 137 267 -45 2437 85 0 7 chr17 60276557 60276863 -25161617 - AluSx SINE Alu -8 304 1 1397 185 20 66 chr17 60276863 60276893 -25161587 + AluJo SINE Alu 267 297 -15 335 169 0 13 chr17 60276893 60276970 -25161510 + GA-rich Low_complexity Low_complexity 1 76 0 1031 174 0 0 chr17 60277025 60277180 -25161300 + AluJo SINE Alu 114 268 -44 308 185 0 87 chr17 60277182 60277203 -25161277 - L2 LINE L2 -2760 554 533 6655 84 0 20 chr17 60277203 60278072 -25160408 - L1PA8 LINE L1 0 6172 5307 2358 81 0 0 chr17 60278072 60278368 -25160112 - AluY SINE Alu 0 311 16 6655 84 0 20 chr17 60278368 60278470 -25160010 - L1PA8 LINE L1 -865 5307 5205 308 185 0 87 chr17 60278470 60278540 -25159940 - L2 LINE L2 -2781 533 471 229 273 0 0 chr17 60278564 60278619 -25159861 - L1M1 LINE L1 -733 5567 5513 2123 106 31 10 chr17 60278702 60278995 -25159485 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr17 60279086 60279111 -25159369 + AT_rich Low_complexity Low_complexity 1 25 0 183 80 0 0 chr17 60279139 60279164 -25159316 + (TG)n Simple_repeat Simple_repeat 2 26 0 2311 75 3 16 chr17 60279766 60280073 -25158407 - AluY SINE Alu -8 303 1 1564 162 9 81 chr17 60280271 60280420 -25158060 + AluJo SINE Alu 1 116 -196 2214 103 0 10 chr17 60280420 60280720 -25157760 + AluSx SINE Alu 1 297 -15 1564 162 9 81 chr17 60280720 60280891 -25157589 + AluJo SINE Alu 116 298 -14 23 33 0 0 chr17 60281002 60281032 -25157448 + AT_rich Low_complexity Low_complexity 1 30 0 2692 215 29 21 chr17 60281074 60281346 -25157134 + L1ME2 LINE L1 5424 5692 -472 2566 53 0 3 chr17 60281346 60281647 -25156833 - AluSq SINE Alu -13 300 1 2692 215 29 21 chr17 60281647 60282094 -25156386 + L1ME2 LINE L1 5692 6149 -15 285 143 0 0 chr17 60282672 60282714 -25155766 + 5S rRNA rRNA 1 42 -79 1971 141 0 46 chr17 60282757 60282896 -25155584 + AluJb SINE Alu 1 145 -167 435 68 0 0 chr17 60282896 60282955 -25155525 + (CA)n Simple_repeat Simple_repeat 2 60 0 1971 141 0 46 chr17 60282955 60283142 -25155338 + AluJb SINE Alu 145 312 0 1100 96 0 0 chr17 60283577 60283713 -25154767 + AluSq/x SINE Alu 1 136 -176 453 202 0 0 chr17 60283730 60283751 -25154729 + GA-rich Low_complexity Low_complexity 3 23 -78 2328 83 3 0 chr17 60283751 60284040 -25154440 + AluSp SINE Alu 1 290 -23 453 202 0 0 chr17 60284040 60284117 -25154363 + GA-rich Low_complexity Low_complexity 22 101 0 674 284 53 32 chr17 60284128 60284470 -25154010 + HAL1b LINE L1 245 593 -755 241 273 115 44 chr17 60284503 60284640 -25153840 + HAL1b LINE L1 667 822 -526 760 184 0 29 chr17 60284640 60284776 -25153704 + FLAM_C SINE Alu 1 132 -1 241 273 115 44 chr17 60284776 60284821 -25153659 + HAL1b LINE L1 822 862 -486 2338 98 0 0 chr17 60284833 60285128 -25153352 + AluSx SINE Alu 1 295 -17 318 263 188 23 chr17 60285137 60285190 -25153290 + HAL1 LINE L1 1699 1742 -765 189 0 0 0 chr17 60285190 60285211 -25153269 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 318 263 188 23 chr17 60285211 60285290 -25153190 + HAL1 LINE L1 1742 1853 -654 227 267 0 22 chr17 60285375 60285465 -25153015 + HAL1 LINE L1 1978 2065 -442 1563 149 40 112 chr17 60285467 60285842 -25152638 + Tigger3(Golem) DNA MER2_type 1 3028 -1 334 219 248 48 chr17 60285843 60286053 -25152427 + HAL1 LINE L1 2066 2317 -190 486 238 65 60 chr17 60286068 60286160 -25152320 + HAL1 LINE L1 2259 2349 -158 2242 113 7 0 chr17 60286160 60286460 -25152020 + AluSq SINE Alu 1 302 -11 2059 116 27 3 chr17 60286460 60286754 -25151726 + AluSg SINE Alu 1 301 -9 486 238 65 60 chr17 60286754 60286908 -25151572 + HAL1 LINE L1 2348 2507 0 378 186 264 7 chr17 60287149 60287289 -25151191 - L2 LINE L2 -1 3312 3137 2394 89 3 0 chr17 60287290 60287593 -25150887 + AluSx SINE Alu 1 304 -8 2333 87 7 0 chr17 60287616 60287914 -25150566 + AluSq SINE Alu 1 300 -13 2209 87 0 63 chr17 60287916 60288248 -25150232 + AluY SINE Alu 1 311 0 1112 148 11 0 chr17 60288248 60288424 -25150056 + AluSg/x SINE Alu 131 308 -2 2471 66 0 10 chr17 60289271 60289572 -25148908 + AluSq SINE Alu 1 298 -15 858 111 15 30 chr17 60290741 60290876 -25147604 + AluJo SINE Alu 1 133 -169 198 0 0 0 chr17 60290927 60290949 -25147531 + (A)n Simple_repeat Simple_repeat 1 22 0 332 298 85 44 chr17 60291658 60292000 -25146480 + L1ME4a LINE L1 5572 5927 -194 210 71 0 0 chr17 60292000 60292028 -25146452 + (TA)n Simple_repeat Simple_repeat 1 28 0 201 74 0 0 chr17 60292028 60292055 -25146425 + (GA)n Simple_repeat Simple_repeat 1 27 0 2447 78 0 13 chr17 60292298 60292607 -25145873 - AluSc SINE Alu -4 305 1 941 205 0 0 chr17 60292784 60292950 -25145530 + AluJo SINE Alu 137 302 0 26 30 0 0 chr17 60294935 60294968 -25143512 + AT_rich Low_complexity Low_complexity 1 33 0 198 0 0 0 chr17 60295470 60295492 -25142988 + (TTG)n Simple_repeat Simple_repeat 2 23 0 285 242 69 79 chr17 60296292 60296408 -25142072 + MIR SINE MIR 31 153 -70 203 277 0 0 chr17 60296443 60296490 -25141990 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 2531 68 0 0 chr17 60296861 60297156 -25141324 - AluSx SINE Alu -17 295 1 2192 104 7 3 chr17 60297642 60297939 -25140541 + AluSg SINE Alu 2 299 -11 1696 145 26 43 chr17 60298037 60298175 -25140305 + AluJo SINE Alu 1 140 -172 2379 97 0 0 chr17 60298175 60298483 -25139997 + AluY SINE Alu 1 308 -3 1696 145 26 43 chr17 60298483 60298648 -25139832 + AluJo SINE Alu 140 299 -13 610 162 0 36 chr17 60299887 60299998 -25138482 + FLAM_C SINE Alu 31 137 -6 276 290 182 11 chr17 60300011 60300280 -25138200 - L2 LINE L2 -221 3051 2739 248 276 56 84 chr17 60300489 60300703 -25137777 - L2 LINE L2 -1511 1803 1596 34 24 0 0 chr17 60301485 60301526 -25136954 + AT_rich Low_complexity Low_complexity 1 41 0 2263 114 7 0 chr17 60301665 60301963 -25136517 + AluSg SINE Alu 1 300 -10 1978 105 11 7 chr17 60302255 60302531 -25135949 - AluSx SINE Alu -22 290 14 367 308 19 0 chr17 60302663 60302770 -25135710 - MIR SINE MIR -149 113 5 1952 120 0 0 chr17 60302931 60303198 -25135282 + AluSx SINE Alu 1 267 -45 189 0 0 0 chr17 60303198 60303219 -25135261 + (TAAAAA)n Simple_repeat Simple_repeat 4 24 0 210 228 174 22 chr17 60303492 60303584 -25134896 + L2 LINE L2 2924 3029 -243 236 267 311 37 chr17 60303813 60303948 -25134532 + MIR3 SINE MIR 21 192 -16 22 0 0 0 chr17 60306185 60306207 -25132273 + AT_rich Low_complexity Low_complexity 1 22 0 1811 133 0 15 chr17 60310701 60310971 -25127509 - AluSx SINE Alu -13 299 34 2071 118 13 7 chr17 60311006 60311312 -25127168 - AluSx SINE Alu -4 308 1 482 299 120 19 chr17 60312405 60312780 -25125700 + L1MCc LINE L1 10 422 -6001 1320 247 93 51 chr17 60313039 60313374 -25125106 + L1MCc LINE L1 821 1140 -5731 364 203 40 0 chr17 60313374 60313448 -25125032 + MADE1 DNA Mariner 1 77 -3 1320 247 93 51 chr17 60313448 60313693 -25124787 + L1MCc LINE L1 1140 1373 -5498 2043 95 8 0 chr17 60313693 60313957 -25124523 + AluSx SINE Alu 38 303 -9 1320 247 93 51 chr17 60313957 60314406 -25124074 + L1MCc LINE L1 1373 1801 -5070 1889 146 26 3 chr17 60314406 60314708 -25123772 + AluJo SINE Alu 1 309 -3 1991 161 0 0 chr17 60314708 60315006 -25123474 + AluSx SINE Alu 1 298 -14 2436 100 0 0 chr17 60315010 60315319 -25123161 + AluSg SINE Alu 1 309 -1 1320 247 93 51 chr17 60315319 60315385 -25123095 + L1MCc LINE L1 1803 1984 -4887 2297 104 7 7 chr17 60315392 60315700 -25122780 + AluSq SINE Alu 1 308 -5 588 188 140 105 chr17 60315707 60315753 -25122727 + L1M4 LINE L1 3525 3568 -2578 1824 102 0 0 chr17 60315753 60315989 -25122491 + AluSq SINE Alu 1 236 -77 588 188 140 105 chr17 60315989 60316171 -25122309 + L1M4 LINE L1 3568 3761 -2385 255 89 89 0 chr17 60316156 60316201 -25122279 + L1MC4 LINE L1 5425 5473 -2522 * 486 222 131 20 chr17 60316241 60316394 -25122086 + L1MC4 LINE L1 5458 5627 -539 787 293 120 64 chr17 60316399 60316746 -25121734 - MER21B LTR ERV1 -159 704 378 567 103 0 0 chr17 60316746 60316843 -25121637 + (TA)n Simple_repeat Simple_repeat 1 97 0 787 293 120 64 chr17 60316843 60316889 -25121591 - MER21B LTR ERV1 -485 378 336 2240 98 3 0 chr17 60316889 60317174 -25121306 - AluSp SINE Alu -26 287 2 787 293 120 64 chr17 60317174 60317431 -25121049 - MER21B LTR ERV1 -527 336 17 1715 242 166 61 chr17 60317443 60317468 -25121012 + L1MC4 LINE L1 5621 5642 -2400 2448 116 81 0 chr17 60317468 60317803 -25120677 + THE1B LTR MaLR 3 364 0 1715 242 166 61 chr17 60317803 60318080 -25120400 + L1MC4 LINE L1 5642 5888 -2154 210 37 0 0 chr17 60318080 60318107 -25120373 + (CAGAT)n Simple_repeat Simple_repeat 2 28 0 1715 242 166 61 chr17 60318107 60318755 -25119725 + L1MC4 LINE L1 5888 6672 -1370 524 212 18 9 chr17 60318770 60318936 -25119544 - MER2 DNA MER2_type 0 345 122 843 169 42 0 chr17 60318938 60319080 -25119400 + FRAM SINE Alu 3 150 -26 909 178 0 0 chr17 60319088 60319223 -25119257 - MER2 DNA MER2_type -210 135 1 2493 77 3 3 chr17 60319233 60319544 -25118936 - AluSp SINE Alu -2 311 1 1065 170 0 0 chr17 60319549 60319714 -25118766 - AluJb SINE Alu -17 295 131 2191 212 82 67 chr17 60319714 60320243 -25118237 + L1MC4a LINE L1 6615 7159 -649 1341 178 110 8 chr17 60320243 60320507 -25117973 + AluJb SINE Alu 1 291 -21 2191 212 82 67 chr17 60320507 60320681 -25117799 + L1MC4a LINE L1 7159 7329 -479 2219 101 10 0 chr17 60320686 60320984 -25117496 + AluSx SINE Alu 1 301 -11 1368 161 81 15 chr17 60321017 60321277 -25117203 + AluJb SINE Alu 21 297 -15 264 149 0 0 chr17 60321286 60321333 -25117147 + (TG)n Simple_repeat Simple_repeat 2 48 0 2039 223 62 4 chr17 60321341 60321807 -25116673 + L1MD3 LINE L1 7493 7985 -10 34 0 0 0 chr17 60323958 60323992 -25114488 + AT_rich Low_complexity Low_complexity 1 34 0 338 265 102 41 chr17 60324657 60324804 -25113676 + L1MC4a LINE L1 5755 5910 -1898 2145 131 0 3 chr17 60324816 60325113 -25113367 + AluSx SINE Alu 6 301 -11 544 203 52 120 chr17 60325322 60325406 -25113074 - MER58C DNA MER1_type -2205 215 127 2358 86 0 22 chr17 60325406 60325719 -25112761 + AluSg SINE Alu 1 306 -4 544 203 52 120 chr17 60325719 60325826 -25112654 - MER58C DNA MER1_type -2293 127 37 236 206 0 22 chr17 60325949 60326041 -25112439 + GA-rich Low_complexity Low_complexity 2 91 0 1576 175 20 30 chr17 60326727 60327030 -25111450 - AluJo SINE Alu -12 300 1 528 265 160 72 chr17 60327074 60327381 -25111099 + L1MEd LINE L1 12 291 -5828 1676 163 45 10 chr17 60327381 60327670 -25110810 - AluJb SINE Alu -13 299 1 528 265 160 72 chr17 60327670 60327932 -25110548 + L1MEd LINE L1 291 631 -5488 364 218 148 74 chr17 60328091 60328293 -25110187 + L1MEd LINE L1 598 814 -5318 1453 155 3 89 chr17 60328297 60328601 -25109879 + AluJo SINE Alu 1 278 -34 1561 237 91 21 chr17 60328749 60329331 -25109149 + L1MEd LINE L1 2902 3524 -2605 2698 210 143 12 chr17 60329646 60329790 -25108690 + MER99 DNA DNA 2 126 -702 2058 127 3 7 chr17 60329790 60330081 -25108399 - AluSg SINE Alu -20 290 1 2698 210 143 12 chr17 60330081 60330666 -25107814 + MER99 DNA DNA 126 826 -2 265 189 135 27 chr17 60330747 60330821 -25107659 - HsTC2 DNA Tc2 -1799 99 18 238 178 0 0 chr17 60330994 60331039 -25107441 + MLT1L LTR MaLR 38 82 -533 2118 115 0 7 chr17 60331103 60331417 -25107063 + AluSx SINE Alu 1 312 0 450 274 126 86 chr17 60331443 60331657 -25106823 + MLT1L LTR MaLR 220 457 -158 448 91 23 0 chr17 60331657 60331745 -25106735 + (CA)n Simple_repeat Simple_repeat 2 91 0 450 274 126 86 chr17 60331745 60331903 -25106577 + MLT1L LTR MaLR 457 607 -8 812 160 23 0 chr17 60333116 60333247 -25105233 + AluJo SINE Alu 1 134 -178 538 251 25 108 chr17 60333546 60333615 -25104865 + MIR SINE MIR 7 80 -182 2291 112 0 6 chr17 60333615 60333927 -25104553 - AluSx SINE Alu -2 310 1 2486 93 0 0 chr17 60333933 60334244 -25104236 - AluSq SINE Alu -2 311 1 538 251 25 108 chr17 60334244 60334410 -25104070 + MIR SINE MIR 85 235 -27 1115 225 19 5 chr17 60334683 60334896 -25103584 + MER20 DNA MER1_type 4 219 0 2091 124 3 0 chr17 60335007 60335289 -25103191 - AluSx SINE Alu -27 285 3 2131 123 3 3 chr17 60335387 60335697 -25102783 + AluSg SINE Alu 1 310 0 352 75 0 30 chr17 60336705 60336772 -25101708 + (CCA)n Simple_repeat Simple_repeat 1 65 0 2246 99 7 0 chr17 60337096 60337388 -25101092 + AluSx SINE Alu 3 296 -16 932 152 73 0 chr17 60337422 60337587 -25100893 + L1MD2 LINE L1 6181 6357 -2 2043 111 7 17 chr17 60337657 60337945 -25100535 - AluSx SINE Alu -27 285 1 32 0 0 0 chr17 60338176 60338208 -25100272 + AT_rich Low_complexity Low_complexity 1 32 0 798 162 0 0 chr17 60338209 60338326 -25100154 - FLAM_C SINE Alu -16 117 1 1504 81 0 52 chr17 60339378 60339588 -25098892 + AluY SINE Alu 96 294 -17 2237 98 7 13 chr17 60339654 60339961 -25098519 + AluSx SINE Alu 1 305 -7 1128 135 19 0 chr17 60340318 60340474 -25098006 + AluSg/x SINE Alu 122 280 -30 216 0 0 0 chr17 60340477 60340501 -25097979 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2225 115 0 7 chr17 60340610 60340914 -25097566 + AluSq SINE Alu 1 302 -11 1402 210 3 64 chr17 60340980 60341309 -25097171 + AluJo SINE Alu 1 309 -3 1769 134 50 14 chr17 60341390 60341673 -25096807 + AluJo SINE Alu 1 293 -19 2173 117 0 3 chr17 60342124 60342424 -25096056 - AluSq SINE Alu -14 299 1 475 163 38 0 chr17 60342739 60342819 -25095661 + MSTB2 LTR MaLR 316 398 -59 211 211 0 0 chr17 60342819 60342871 -25095609 + A-rich Low_complexity Low_complexity 2 53 0 2209 207 78 28 chr17 60342871 60343484 -25094996 + L1MB7 LINE L1 4252 4895 -1251 2696 180 74 25 chr17 60343484 60343926 -25094554 + L1MB7 LINE L1 5476 5954 -230 2187 113 3 13 chr17 60343926 60344235 -25094245 + AluY SINE Alu 1 306 -5 2696 180 74 25 chr17 60344235 60344358 -25094122 + L1MB7 LINE L1 5954 6069 -115 2414 100 0 0 chr17 60344449 60344759 -25093721 + AluSx SINE Alu 3 312 0 319 292 79 20 chr17 60344763 60345068 -25093412 + L1MC/D LINE L1 3128 3450 -2696 7150 89 29 8 chr17 60345076 60345608 -25092872 + L1MA3 LINE L1 5232 5751 -554 2050 136 0 10 chr17 60345608 60345910 -25092570 + AluSx SINE Alu 1 299 -13 7150 89 29 8 chr17 60345910 60346419 -25092061 + L1MA3 LINE L1 5751 6305 0 418 317 29 25 chr17 60346672 60346912 -25091568 + L1MC/D LINE L1 3698 3938 -2208 675 254 83 48 chr17 60346959 60347211 -25091269 + MIR SINE MIR 2 262 0 257 253 22 22 chr17 60347266 60347357 -25091123 + L1MC/D LINE L1 5357 5447 -897 405 202 0 45 chr17 60347422 60347511 -25090969 - MER8 DNA MER2_type 0 239 155 1931 133 11 7 chr17 60347570 60347876 -25090604 - AluSx SINE Alu 0 307 1 2048 98 25 7 chr17 60347894 60348180 -25090300 + AluY SINE Alu 18 308 -3 2368 101 0 0 chr17 60348430 60348738 -25089742 + AluSq SINE Alu 1 308 -5 318 291 32 39 chr17 60348752 60349034 -25089446 + L1M4 LINE L1 4297 4576 -1570 1197 186 53 46 chr17 60349060 60349323 -25089157 - AluJo SINE Alu -46 266 2 245 222 42 0 chr17 60349516 60349588 -25088892 - MER116 DNA Mariner -3 77 3 241 250 0 20 chr17 60349861 60349961 -25088519 + (TTA)n Simple_repeat Simple_repeat 1 98 0 1297 160 25 17 chr17 60350029 60350266 -25088214 + MER8 DNA MER2_type 1 239 0 231 276 11 0 chr17 60350374 60350461 -25088019 - L1M LINE L1 -2407 5401 5314 1855 198 26 12 chr17 60350590 60351094 -25087386 + L1M4 LINE L1 4815 5325 -821 1409 280 91 104 chr17 60351161 60351929 -25086551 + L2 LINE L2 1717 2520 -793 281 161 113 0 chr17 60351929 60351991 -25086489 + MER105 DNA DNA 70 138 -66 1409 280 91 104 chr17 60351991 60352704 -25085776 + L2 LINE L2 2520 3241 -72 768 188 0 0 chr17 60353644 60353772 -25084708 + FLAM_C SINE Alu 1 128 -5 854 102 8 23 chr17 60354113 60354241 -25084239 + AluJb SINE Alu 1 126 -186 327 113 0 0 chr17 60354247 60354300 -25084180 + Alu SINE Alu 246 298 -4 2204 89 17 3 chr17 60354614 60354905 -25083575 - AluSq SINE Alu -18 295 1 266 291 8 17 chr17 60355130 60355247 -25083233 - L1ME LINE L1 -263 5858 5743 358 373 65 13 chr17 60355267 60355420 -25083060 - L1ME LINE L1 -2154 5654 5494 2902 9 0 0 chr17 60356742 60357059 -25081421 + AluYb8 SINE Alu 1 317 -1 188 354 159 9 chr17 60357466 60357579 -25080901 + L2 LINE L2 3134 3263 -9 1736 112 69 4 chr17 60357935 60358212 -25080268 - AluSc SINE Alu -14 295 1 2063 106 42 3 chr17 60358334 60358618 -25079862 + AluSx SINE Alu 1 295 -17 32 26 0 0 chr17 60359581 60359620 -25078860 + AT_rich Low_complexity Low_complexity 1 39 0 330 109 0 0 chr17 60359652 60359698 -25078782 - Alu SINE Alu -253 46 1 2454 80 3 0 chr17 60359843 60360144 -25078336 + AluSq SINE Alu 1 302 -11 2399 64 0 0 chr17 60360145 60360427 -25078053 + AluY SINE Alu 14 295 -16 400 94 0 0 chr17 60360428 60360481 -25077999 - Alu SINE Alu -260 53 1 22 56 0 0 chr17 60360481 60360517 -25077963 + AT_rich Low_complexity Low_complexity 1 36 0 292 229 45 102 chr17 60360535 60360692 -25077788 - L2 LINE L2 -1 3312 3165 649 302 58 32 chr17 60360913 60361221 -25077259 - MLT1K LTR MaLR -119 469 154 2179 105 34 0 chr17 60361308 60361602 -25076878 + AluSx SINE Alu 1 304 -8 596 316 71 40 chr17 60361625 60362075 -25076405 + L1M4 LINE L1 4395 4858 -1288 279 262 60 12 chr17 60362091 60362175 -25076305 - L2 LINE L2 0 3272 3185 193 298 0 18 chr17 60362185 60362242 -25076238 + MIR SINE MIR 2 57 -205 929 158 31 90 chr17 60362475 60362629 -25075851 + MER3 DNA MER1_type 1 162 -47 1029 146 0 24 chr17 60362629 60362794 -25075686 - FAM SINE Alu -11 164 4 929 158 31 90 chr17 60362794 60362817 -25075663 + MER3 DNA MER1_type 162 185 -24 2500 79 3 0 chr17 60362817 60363120 -25075360 + AluSp SINE Alu 1 304 -9 929 158 31 90 chr17 60363120 60363163 -25075317 + MER3 DNA MER1_type 185 209 0 1734 180 0 36 chr17 60363612 60363918 -25074562 + AluJo SINE Alu 1 295 -17 2368 86 0 7 chr17 60363918 60364219 -25074261 + AluSq SINE Alu 1 300 -13 2209 87 0 63 chr17 60364221 60364553 -25073927 + AluY SINE Alu 1 311 0 1112 148 11 0 chr17 60364553 60364729 -25073751 + AluSg/x SINE Alu 133 310 -2 2471 66 0 10 chr17 60365576 60365877 -25072603 + AluSq SINE Alu 1 298 -15 751 169 0 29 chr17 60367046 60367182 -25071298 + AluJo SINE Alu 1 132 -170 189 0 0 0 chr17 60367233 60367254 -25071226 + (A)n Simple_repeat Simple_repeat 1 21 0 332 298 85 44 chr17 60367963 60368305 -25070175 + L1ME4a LINE L1 5572 5927 -194 210 71 0 0 chr17 60368305 60368333 -25070147 + (TA)n Simple_repeat Simple_repeat 1 28 0 219 69 0 0 chr17 60368333 60368362 -25070118 + (GA)n Simple_repeat Simple_repeat 1 29 0 2447 78 0 13 chr17 60368605 60368914 -25069566 - AluSc SINE Alu -4 305 1 941 205 0 0 chr17 60369091 60369257 -25069223 + AluJo SINE Alu 137 302 0 26 30 0 0 chr17 60371242 60371275 -25067205 + AT_rich Low_complexity Low_complexity 1 33 0 198 0 0 0 chr17 60371777 60371799 -25066681 + (TTG)n Simple_repeat Simple_repeat 2 23 0 285 242 69 79 chr17 60372599 60372715 -25065765 + MIR SINE MIR 31 153 -70 203 277 0 0 chr17 60372750 60372797 -25065683 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 2522 68 0 0 chr17 60373168 60373463 -25065017 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 60373665 60373695 -25064785 + AT_rich Low_complexity Low_complexity 1 30 0 2692 215 29 21 chr17 60373737 60374009 -25064471 + L1ME2 LINE L1 5424 5692 -472 2566 53 0 3 chr17 60374009 60374310 -25064170 - AluSq SINE Alu -13 300 1 2692 215 29 21 chr17 60374310 60374757 -25063723 + L1ME2 LINE L1 5692 6149 -15 285 143 0 0 chr17 60375335 60375377 -25063103 + 5S rRNA rRNA 1 42 -79 1971 141 0 46 chr17 60375420 60375559 -25062921 + AluJb SINE Alu 1 145 -167 435 68 0 0 chr17 60375559 60375618 -25062862 + (CA)n Simple_repeat Simple_repeat 2 60 0 1971 141 0 46 chr17 60375618 60375805 -25062675 + AluJb SINE Alu 145 312 0 1100 96 0 0 chr17 60376240 60376376 -25062104 + AluSq/x SINE Alu 1 136 -176 453 202 0 0 chr17 60376393 60376414 -25062066 + GA-rich Low_complexity Low_complexity 3 23 -78 2328 83 3 0 chr17 60376414 60376703 -25061777 + AluSp SINE Alu 1 290 -23 453 202 0 0 chr17 60376703 60376780 -25061700 + GA-rich Low_complexity Low_complexity 22 101 0 674 284 53 32 chr17 60376791 60377133 -25061347 + HAL1b LINE L1 245 593 -755 241 273 115 44 chr17 60377166 60377303 -25061177 + HAL1b LINE L1 667 822 -526 760 184 0 29 chr17 60377303 60377439 -25061041 + FLAM_C SINE Alu 1 132 -1 241 273 115 44 chr17 60377439 60377484 -25060996 + HAL1b LINE L1 822 862 -486 2338 98 0 0 chr17 60377496 60377791 -25060689 + AluSx SINE Alu 1 295 -17 318 263 188 23 chr17 60377800 60377853 -25060627 + HAL1 LINE L1 1699 1742 -765 189 0 0 0 chr17 60377853 60377874 -25060606 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 318 263 188 23 chr17 60377874 60377953 -25060527 + HAL1 LINE L1 1742 1853 -654 227 267 0 22 chr17 60378038 60378128 -25060352 + HAL1 LINE L1 1978 2065 -442 1563 149 40 112 chr17 60378130 60378505 -25059975 + Tigger3(Golem) DNA MER2_type 1 3028 -1 334 219 248 48 chr17 60378506 60378716 -25059764 + HAL1 LINE L1 2066 2317 -190 486 238 65 60 chr17 60378731 60378823 -25059657 + HAL1 LINE L1 2259 2349 -158 2242 113 7 0 chr17 60378823 60379123 -25059357 + AluSq SINE Alu 1 302 -11 2059 116 27 3 chr17 60379123 60379417 -25059063 + AluSg SINE Alu 1 301 -9 486 238 65 60 chr17 60379417 60379571 -25058909 + HAL1 LINE L1 2348 2507 0 378 186 264 7 chr17 60379812 60379952 -25058528 - L2 LINE L2 -1 3312 3137 2394 89 3 0 chr17 60379953 60380256 -25058224 + AluSx SINE Alu 1 304 -8 2332 82 3 0 chr17 60380279 60380571 -25057909 + AluSg SINE Alu 1 293 -17 639 233 92 33 chr17 60380637 60380877 -25057603 - L2 LINE L2 -1198 2116 1863 1607 37 0 0 chr17 60381131 60381319 -25057161 - L1PA3 LINE L1 -3 6152 5965 2192 86 40 16 chr17 60382322 60382625 -25055855 + AluSg SINE Alu 1 310 0 418 278 146 0 chr17 60382909 60383060 -25055420 - MIR3 SINE MIR 0 208 36 2302 92 16 3 chr17 60383505 60383808 -25054672 - AluSq SINE Alu -6 307 1 26 30 0 0 chr17 60384385 60384418 -25054062 + AT_rich Low_complexity Low_complexity 1 33 0 2012 133 7 26 chr17 60385422 60385731 -25052749 - AluSx SINE Alu -9 303 1 2496 81 0 0 chr17 60386134 60386432 -25052048 + AluSc SINE Alu 2 299 -10 2473 73 0 0 chr17 60386443 60386744 -25051736 + AluSq SINE Alu 1 301 -12 366 206 14 0 chr17 60386744 60386817 -25051663 + MER112 DNA MER1_type 183 256 -4 1770 164 10 10 chr17 60386824 60387122 -25051358 + AluJo SINE Alu 1 298 -14 22 35 0 0 chr17 60387130 60387159 -25051321 + AT_rich Low_complexity Low_complexity 1 29 0 300 309 74 19 chr17 60387200 60387362 -25051118 + L2 LINE L2 775 945 -2369 1319 25 6 0 chr17 60387399 60387557 -25050923 + L1PA3 LINE L1 5996 6154 -1 982 170 19 0 chr17 60387599 60387758 -25050722 + FRAM SINE Alu 1 162 -4 575 171 0 0 chr17 60387840 60387928 -25050552 + AluSg/x SINE Alu 207 294 -18 223 186 0 17 chr17 60388009 60388068 -25050412 + A-rich Low_complexity Low_complexity 3 60 0 955 177 22 17 chr17 60388327 60388508 -25049972 + MER5A DNA MER1_type 2 183 -6 636 140 44 9 chr17 60388538 60388652 -25049828 + L2 LINE L2 3185 3302 -11 224 256 22 22 chr17 60388778 60388868 -25049612 + L2 LINE L2 1690 1779 -1535 326 123 0 0 chr17 60388948 60389013 -25049467 - L1MB8 LINE L1 0 6178 6114 464 97 0 0 chr17 60389013 60389085 -25049395 + HY3 scRNA scRNA 30 101 0 3268 149 48 50 chr17 60389090 60389822 -25048658 - L1MB8 LINE L1 -54 6124 5395 2278 100 7 0 chr17 60389863 60390162 -25048318 - AluSx SINE Alu -11 301 1 2283 255 56 28 chr17 60390166 60390931 -25047549 - MER21B LTR ERV1 -58 805 19 339 215 25 0 chr17 60390950 60391029 -25047451 - MER21B LTR ERV1 -776 87 7 1942 147 87 36 chr17 60391038 60391181 -25047299 - L1MB8 LINE L1 -744 5402 5268 1331 198 57 7 chr17 60391181 60391464 -25047016 - AluJo SINE Alu -14 298 2 1942 147 87 36 chr17 60391464 60391791 -25046689 - L1MB8 LINE L1 -878 5268 4908 515 153 198 0 chr17 60391812 60391951 -25046529 - FLAM_C SINE Alu 0 161 1 2150 139 7 0 chr17 60391951 60392253 -25046227 - AluSx SINE Alu -8 304 1 290 305 219 0 chr17 60392265 60392416 -25046064 + L2 LINE L2 1939 2122 -1192 1191 248 91 77 chr17 60392418 60393003 -25045477 - MLT1G1 LTR MaLR -2 593 1 299 207 41 91 chr17 60393009 60393130 -25045350 - MLT1G1-int LTR MaLR -8 1363 1249 560 198 112 5 chr17 60393200 60393387 -25045093 + Charlie2 DNA MER1_type 2258 2464 -398 3451 187 22 34 chr17 60393387 60394796 -25043684 - L1 LINE L1 -3155 3693 2307 2208 113 7 3 chr17 60394796 60395088 -25043392 + AluSq SINE Alu 1 293 -20 3451 187 22 34 chr17 60395088 60395261 -25043219 - L1 LINE L1 -4541 2307 2134 2253 182 14 23 chr17 60395373 60395819 -25042661 + MER49 LTR ERV1 408 850 -73 2334 85 3 0 chr17 60395819 60396113 -25042367 - AluY SINE Alu -16 295 1 2253 182 14 23 chr17 60396113 60396178 -25042302 + MER49 LTR ERV1 850 914 -9 215 368 42 28 chr17 60396208 60396352 -25042128 - L2 LINE L2 -457 2857 2712 1827 147 3 29 chr17 60396357 60396664 -25041816 - AluJb SINE Alu -3 309 11 217 340 142 55 chr17 60396671 60396924 -25041556 - L2 LINE L2 -581 2733 2459 2773 13 0 0 chr17 60397233 60397537 -25040943 + AluYb8 SINE Alu 1 304 -14 182 269 19 39 chr17 60397733 60397785 -25040695 + MIR SINE MIR 41 91 -117 226 247 305 19 chr17 60397957 60398111 -25040369 + MIR SINE MIR 65 262 0 2511 61 3 0 chr17 60398563 60398859 -25039621 + AluY SINE Alu 1 297 -14 23 0 0 0 chr17 60398895 60398918 -25039562 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr17 60398918 60398944 -25039536 + (TA)n Simple_repeat Simple_repeat 2 27 0 2124 109 0 0 chr17 60398949 60399233 -25039247 + AluSx SINE Alu 1 284 -28 216 86 0 0 chr17 60399235 60399270 -25039210 + (GGAAA)n Simple_repeat Simple_repeat 5 39 0 2083 284 90 11 chr17 60399719 60400353 -25038127 + L1M4b LINE L1 21 704 -6155 1919 152 26 26 chr17 60400410 60400483 -25037997 - MER2 DNA MER2_type -1 343 271 1776 148 0 49 chr17 60400483 60400788 -25037692 + AluJo SINE Alu 3 292 -20 1919 152 26 26 chr17 60400788 60400802 -25037678 - MER2 DNA MER2_type -73 271 258 1789 124 0 4 chr17 60400802 60401059 -25037421 + AluSq SINE Alu 56 311 -2 1919 152 26 26 chr17 60401059 60401313 -25037167 - MER2 DNA MER2_type -85 259 1 859 211 25 0 chr17 60401351 60401512 -25036968 + FRAM SINE Alu 1 161 -15 2377 91 0 10 chr17 60401514 60401822 -25036658 + AluY SINE Alu 2 306 -5 2303 106 0 3 chr17 60401826 60402137 -25036343 + AluSg SINE Alu 1 310 0 385 154 0 15 chr17 60402137 60402202 -25036278 + L1M4 LINE L1 3782 3845 -2301 2195 116 0 3 chr17 60402202 60402496 -25035984 + AluSx SINE Alu 2 294 -18 1873 201 56 2 chr17 60402525 60402938 -25035542 + L1MC4 LINE L1 7080 7514 -528 284 340 84 30 chr17 60403597 60403894 -25034586 + L2 LINE L2 1147 1459 -1855 2373 99 0 0 chr17 60404256 60404558 -25033922 - AluSx SINE Alu -10 302 1 1780 154 3 17 chr17 60405159 60405458 -25033022 - AluJo SINE Alu -16 296 2 21 0 0 0 chr17 60405495 60405516 -25032964 + AT_rich Low_complexity Low_complexity 1 21 0 717 184 173 22 chr17 60405944 60406072 -25032408 + MER3 DNA MER1_type 4 111 -98 1289 200 88 11 chr17 60406072 60406357 -25032123 + AluJb SINE Alu 1 307 -5 2487 67 0 10 chr17 60406359 60406673 -25031807 + AluY SINE Alu 1 311 0 717 184 173 22 chr17 60406673 60406720 -25031760 + MER3 DNA MER1_type 111 209 0 2116 84 44 14 chr17 60407210 60407506 -25030974 + AluY SINE Alu 1 305 -6 1565 120 0 17 chr17 60407506 60407740 -25030740 + L1PA13 LINE L1 5933 6162 -1 664 201 15 30 chr17 60408003 60408137 -25030343 - FLAM_A SINE Alu -1 132 1 2502 30 47 3 chr17 60408244 60408542 -25029938 + AluY SINE Alu 1 311 0 1936 128 28 0 chr17 60409014 60409304 -25029176 - AluSq SINE Alu -15 298 1 2031 143 3 3 chr17 60409319 60409620 -25028860 - AluSx SINE Alu -11 301 1 2771 77 3 14 chr17 60409984 60410347 -25028133 + L1PA14 LINE L1 5803 6161 0 1863 163 0 20 chr17 60410372 60410673 -25027807 + AluJb SINE Alu 1 295 -17 618 206 9 0 chr17 60410738 60410886 -25027594 + L1MB3 LINE L1 5126 5282 -864 1841 111 0 4 chr17 60410886 60411129 -25027351 + AluSx SINE Alu 1 242 -70 316 259 0 74 chr17 60461130 60461238 -24977242 - HAL1 LINE L1 -550 1957 1858 1506 158 40 47 chr17 60461260 60461368 -24977112 + MER58B DNA MER1_type 47 154 -2266 2220 105 0 13 chr17 60461368 60461673 -24976807 + AluSg SINE Alu 1 301 -9 1506 158 40 47 chr17 60461673 60461861 -24976619 + MER58B DNA MER1_type 154 341 0 299 213 0 0 chr17 60461930 60461991 -24976489 - HAL1 LINE L1 -871 1636 1576 693 133 0 0 chr17 60461992 60462090 -24976390 + AluJ/FLAM SINE Alu 2 99 -213 1633 94 0 39 chr17 60462242 60462475 -24976005 + AluSg/x SINE Alu 72 295 -17 2044 96 68 0 chr17 60462717 60462997 -24975483 + AluSx SINE Alu 1 299 -13 2551 25 0 0 chr17 60463187 60463511 -24974969 + AluY SINE Alu 2 325 0 221 108 27 0 chr17 60463739 60463776 -24974704 + L2 LINE L2 3261 3298 -15 3279 144 26 0 chr17 60464006 60464549 -24973931 + L1MB3 LINE L1 5587 6143 -40 357 272 62 0 chr17 60464553 60464645 -24973835 + FLAM_A SINE Alu 13 99 -34 2002 125 14 0 chr17 60464682 60464983 -24973497 - AluSx SINE Alu 0 305 1 1618 151 60 42 chr17 60465003 60465232 -24973248 + L1MB8 LINE L1 5542 5780 -398 2388 98 3 0 chr17 60465232 60465538 -24972942 + AluSg SINE Alu 1 307 -3 1618 151 60 42 chr17 60465538 60465639 -24972841 + L1MB8 LINE L1 5780 5878 -300 747 104 9 0 chr17 60465640 60465746 -24972734 + AluSq/x SINE Alu 2 108 -204 240 245 0 0 chr17 60465846 60465895 -24972585 + AluJ/monomer SINE Alu 191 239 -63 1382 109 0 0 chr17 60465896 60466071 -24972409 - AluSx SINE Alu -137 175 1 378 113 0 0 chr17 60466078 60466131 -24972349 - FLAM SINE Alu -6 127 75 446 116 0 0 chr17 60466131 60466200 -24972280 + Alu SINE Alu 244 312 0 228 190 60 80 chr17 60466205 60466305 -24972175 + HAL1 LINE L1 2014 2111 -396 936 154 40 69 chr17 60466387 60466424 -24972056 - AluJo/FRAM SINE Alu -6 306 269 2268 117 0 0 chr17 60466424 60466723 -24971757 + AluSg SINE Alu 1 299 -11 936 154 40 69 chr17 60466723 60466860 -24971620 - AluJo/FRAM SINE Alu -43 269 137 605 256 30 0 chr17 60466924 60467092 -24971388 - MIR SINE MIR -57 205 33 1738 167 20 10 chr17 60467300 60467594 -24970886 + AluJb SINE Alu 1 297 -15 2324 72 3 56 chr17 60468119 60468438 -24970042 - AluSp SINE Alu -11 302 1 2408 91 3 0 chr17 60468627 60468925 -24969555 + AluSp SINE Alu 1 299 -14 424 264 60 24 chr17 60469132 60469299 -24969181 + MLT1H LTR MaLR 133 305 -244 229 247 10 72 chr17 60469333 60469430 -24969050 + MLT1H LTR MaLR 421 511 -38 1891 140 27 20 chr17 60469473 60469773 -24968707 - AluJb SINE Alu -10 302 1 2133 122 0 0 chr17 60469796 60470100 -24968380 - AluSc SINE Alu 0 304 1 865 143 0 0 chr17 60470120 60470253 -24968227 + FLAM_C SINE Alu 1 133 0 2222 93 0 42 chr17 60470294 60470607 -24967873 + AluY SINE Alu 1 300 -11 2418 64 17 14 chr17 60470688 60470984 -24967496 + AluSq SINE Alu 1 297 -16 864 146 0 0 chr17 60471567 60471697 -24966783 + AluJb SINE Alu 1 130 -182 2526 71 0 10 chr17 60471878 60472187 -24966293 - AluSc SINE Alu -3 306 1 2283 93 7 3 chr17 60472906 60473207 -24965273 + AluSg1 SINE Alu 1 302 -7 239 323 57 6 chr17 60473677 60473835 -24964645 - L1ME LINE L1 -304 5817 5652 21 36 0 0 chr17 60473845 60473873 -24964607 + AT_rich Low_complexity Low_complexity 1 28 0 1731 113 45 8 chr17 60475041 60475307 -24963173 + MER2 DNA MER2_type 1 276 -69 859 123 23 0 chr17 60475311 60475441 -24963039 - AluJb SINE Alu -12 300 168 348 118 0 0 chr17 60475469 60475520 -24962960 + FRAM/FAM SINE Alu 1 48 -118 2295 99 7 3 chr17 60475906 60476210 -24962270 - AluSc SINE Alu -4 305 1 1320 175 24 118 chr17 60476481 60476819 -24961661 - AluJo SINE Alu -5 307 2 2248 110 0 3 chr17 60477078 60477377 -24961103 + AluSq SINE Alu 1 298 -15 272 224 259 9 chr17 60477982 60478098 -24960382 - MER117 DNA MER1_type -1 196 52 2545 64 0 0 chr17 60479008 60479303 -24959177 - AluY SINE Alu -16 295 1 789 152 0 30 chr17 60479511 60479643 -24958837 - FLAM_C SINE Alu -5 128 1 713 199 100 85 chr17 60479684 60479955 -24958525 + HAL1 LINE L1 1340 1614 -893 2250 88 3 3 chr17 60479966 60480261 -24958219 + AluY SINE Alu 1 295 -16 572 214 34 53 chr17 60480261 60480467 -24958013 + HAL1 LINE L1 1823 2024 -483 865 131 0 23 chr17 60480467 60480597 -24957883 + FLAM_C SINE Alu 1 127 -16 2201 119 0 3 chr17 60480604 60480906 -24957574 + AluSx SINE Alu 1 301 -11 1977 130 0 20 chr17 60481073 60481374 -24957106 + AluSx SINE Alu 1 295 -17 2425 103 0 6 chr17 60481376 60481687 -24956793 + AluSq SINE Alu 1 309 -4 564 281 153 31 chr17 60481701 60482092 -24956388 - MLT1L LTR MaLR -89 526 88 1988 137 58 6 chr17 60482127 60482456 -24956024 - MER7A DNA MER2_type -1 345 2 207 91 0 0 chr17 60482711 60482744 -24955736 + MER5A DNA MER1_type 83 115 -74 406 164 15 0 chr17 60482744 60482811 -24955669 + MER3 DNA MER1_type 1 68 -141 2260 81 26 19 chr17 60482882 60483192 -24955288 - AluSq SINE Alu -1 312 1 1081 170 0 0 chr17 60483423 60483594 -24954886 - FRAM SINE Alu -7 169 1 258 284 137 0 chr17 60483600 60483702 -24954778 - L3 LINE CR1 -1235 342 227 1734 152 40 0 chr17 60483848 60484144 -24954336 - AluJb SINE Alu -4 308 1 1093 149 0 12 chr17 60484226 60484394 -24954086 - FRAM SINE Alu -12 164 1 2648 43 3 0 chr17 60484894 60485196 -24953284 - AluSp SINE Alu -10 303 1 274 297 10 47 chr17 60485895 60486087 -24952393 + MER5A DNA MER1_type 1 185 -4 1143 201 0 0 chr17 60488007 60488196 -24950284 + AluJb SINE Alu 96 284 -28 429 20 0 0 chr17 60488196 60488246 -24950234 + (CA)n Simple_repeat Simple_repeat 2 51 0 448 38 0 0 chr17 60488251 60488304 -24950176 - U2 snRNA snRNA -131 57 5 205 217 43 0 chr17 60488323 60488369 -24950111 + GA-rich Low_complexity Low_complexity 4 51 0 654 132 0 58 chr17 60488370 60488427 -24950053 + (GGAA)n Simple_repeat Simple_repeat 2 61 -119 1887 111 23 4 chr17 60488427 60488689 -24949791 + AluSx SINE Alu 1 267 -45 654 132 0 58 chr17 60488689 60488821 -24949659 + (GGAA)n Simple_repeat Simple_repeat 61 180 0 428 298 23 8 chr17 60488821 60488952 -24949528 + GA-rich Low_complexity Low_complexity 1 133 0 2091 117 9 57 chr17 60489175 60489491 -24948989 + AluSx SINE Alu 1 301 -11 2262 114 0 0 chr17 60490919 60491216 -24947264 + AluSq SINE Alu 1 297 -16 1789 175 3 0 chr17 60491227 60491513 -24946967 + AluSx SINE Alu 1 287 -25 1630 165 63 7 chr17 60491822 60492107 -24946373 - AluJo SINE Alu -11 301 1 971 107 21 0 chr17 60493401 60493541 -24944939 - AluSg/x SINE Alu -14 298 156 1997 146 3 0 chr17 60493677 60493978 -24944502 - AluJb SINE Alu -9 303 2 1975 141 7 3 chr17 60494156 60494461 -24944019 - AluSx SINE Alu -6 306 1 284 200 0 14 chr17 60494461 60494531 -24943949 - MER63 DNA MER1_type -48 1014 946 136 13 0 0 chr17 60494579 60494729 -24943751 + AT_rich Low_complexity Low_complexity 1 150 0 948 202 0 34 chr17 60494756 60494934 -24943546 + FAM SINE Alu 1 47 -2 2247 81 0 11 chr17 60495024 60495309 -24943171 - AluSq SINE Alu -31 282 1 2175 119 0 0 chr17 60495397 60495692 -24942788 - AluSc SINE Alu -14 295 1 1987 133 7 23 chr17 60495859 60496159 -24942321 - AluJo SINE Alu -13 299 5 21 57 0 0 chr17 60496183 60496218 -24942262 + AT_rich Low_complexity Low_complexity 1 35 0 1399 100 0 0 chr17 60496321 60496501 -24941979 + AluSc SINE Alu 61 240 -69 611 96 0 0 chr17 60496505 60496588 -24941892 + AluSc SINE Alu 208 290 -19 3989 151 22 22 chr17 60496603 60497191 -24941289 + L1MB3 LINE L1 5449 6039 -144 1956 117 31 7 chr17 60497191 60497481 -24940999 - AluSx SINE Alu -13 299 3 3989 151 22 22 chr17 60497481 60497626 -24940854 + L1MB3 LINE L1 6038 6182 -1 455 299 24 0 chr17 60497773 60497900 -24940580 + L2 LINE L2 2921 3050 -222 1739 191 0 3 chr17 60498092 60498396 -24940084 + AluJb SINE Alu 1 303 -9 2102 131 0 3 chr17 60498603 60498908 -24939572 + AluSx SINE Alu 3 306 -6 1923 149 3 29 chr17 60499039 60499355 -24939125 - AluJo SINE Alu -4 308 1 1143 129 0 0 chr17 60499399 60499562 -24938918 + AluSp SINE Alu 139 301 -12 273 29 0 0 chr17 60499607 60499641 -24938839 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 315 0 0 0 chr17 60499763 60499798 -24938682 + (CA)n Simple_repeat Simple_repeat 2 36 0 984 89 0 15 chr17 60500014 60500149 -24938331 - FLAM_C SINE Alu 0 133 1 237 61 0 0 chr17 60500215 60500232 -24938248 + (A)n Simple_repeat Simple_repeat 1 17 -16 2168 119 14 3 chr17 60500232 60500525 -24937955 - AluSx SINE Alu -16 296 1 237 61 0 0 chr17 60500525 60500540 -24937940 + (A)n Simple_repeat Simple_repeat 16 33 0 389 231 75 8 chr17 60500545 60500679 -24937801 + L1ME2 LINE L1 4421 4563 -1583 923 143 0 0 chr17 60500684 60500817 -24937663 + FLAM_C SINE Alu 6 138 -5 1142 164 14 24 chr17 60500817 60501025 -24937455 - AluJb SINE Alu -23 289 84 1063 165 11 16 chr17 60501042 60501224 -24937256 + AluJb SINE Alu 132 312 0 1947 181 63 142 chr17 60501224 60501621 -24936859 + L1ME2 LINE L1 5321 5748 -416 1610 167 23 39 chr17 60501621 60501926 -24936554 + AluJo SINE Alu 11 310 -2 1947 181 63 142 chr17 60501926 60501939 -24936541 + L1ME2 LINE L1 5748 5760 -404 346 170 0 0 chr17 60501939 60501992 -24936488 + AluJ/FLAM SINE Alu 38 90 -212 1947 181 63 142 chr17 60501992 60502291 -24936189 + L1ME2 LINE L1 5760 6023 -141 616 167 19 0 chr17 60502295 60502403 -24936077 - FLAM_A SINE Alu -32 110 1 566 165 0 22 chr17 60502403 60502494 -24935986 + L1ME1 LINE L1 6017 6105 -61 820 186 6 19 chr17 60502507 60502663 -24935817 + FAM SINE Alu 12 165 -20 1723 183 0 17 chr17 60502840 60503141 -24935339 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 60504906 60504927 -24933553 + AT_rich Low_complexity Low_complexity 1 21 0 2274 77 14 0 chr17 60506168 60506455 -24932025 - AluSc SINE Alu -18 291 1 243 88 0 0 chr17 60506558 60506592 -24931888 + (A)n Simple_repeat Simple_repeat 1 34 0 429 257 171 14 chr17 60508474 60508614 -24929866 + MER5A DNA MER1_type 20 181 -8 649 108 0 0 chr17 60509034 60509127 -24929353 - AluSg/x SINE Alu 0 309 217 1526 70 0 0 chr17 60509127 60509312 -24929168 - AluSc SINE Alu -124 185 1 258 279 169 15 chr17 60509577 60509713 -24928767 - L2 LINE L2 0 3272 3116 2072 126 0 23 chr17 60509806 60510108 -24928372 + AluSx SINE Alu 1 295 -17 331 316 9 26 chr17 60510108 60510213 -24928267 + L2 LINE L2 3204 3308 -5 215 361 96 6 chr17 60510371 60510537 -24927943 - L2 LINE L2 -494 2820 2640 1038 213 97 86 chr17 60510539 60511085 -24927395 + L1MC4 LINE L1 7491 8042 0 1894 108 4 0 chr17 60511257 60511506 -24926974 - AluSx SINE Alu -62 250 1 270 381 7 0 chr17 60511850 60511989 -24926491 + L2 LINE L2 2603 2742 -572 647 251 63 43 chr17 60512489 60512744 -24925736 - MIR SINE MIR 0 262 3 943 109 15 29 chr17 60512822 60512959 -24925521 - AluSq/x SINE Alu -178 135 1 1344 172 10 50 chr17 60513121 60513424 -24925056 - AluJo SINE Alu -13 299 9 2360 94 0 22 chr17 60513511 60513830 -24924650 + AluSx SINE Alu 1 312 0 1818 179 3 0 chr17 60513854 60514151 -24924329 + AluJb SINE Alu 1 298 -14 369 0 0 0 chr17 60514600 60514641 -24923839 + (CA)n Simple_repeat Simple_repeat 2 42 0 204 40 0 0 chr17 60514640 60514665 -24923815 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 609 213 103 98 chr17 60514839 60515117 -24923363 - HAL1 LINE L1 -15 2492 2210 2407 80 7 7 chr17 60515117 60515419 -24923061 - AluSp SINE Alu -11 302 1 609 213 103 98 chr17 60515419 60515488 -24922992 - HAL1 LINE L1 -297 2210 2143 1071 142 47 0 chr17 60515489 60515658 -24922822 - AluSg/x SINE Alu -20 290 114 1952 63 4 0 chr17 60515758 60515996 -24922484 + AluSp SINE Alu 75 313 0 22 0 0 0 chr17 60516845 60516867 -24921613 + AT_rich Low_complexity Low_complexity 1 22 0 40 21 0 0 chr17 60516999 60517046 -24921434 + AT_rich Low_complexity Low_complexity 1 47 0 2347 87 0 3 chr17 60517055 60517353 -24921127 + AluY SINE Alu 1 297 -14 2006 101 6 75 chr17 60517353 60517597 -24920883 - L1MA5A LINE L1 -12 6285 6070 3812 143 36 2 chr17 60517597 60518207 -24920273 - MER41B LTR ERV1 0 635 5 2006 101 6 75 chr17 60518207 60518308 -24920172 - L1MA5A LINE L1 -227 6070 5964 279 0 0 0 chr17 60518317 60518348 -24920132 + (TTTTA)n Simple_repeat Simple_repeat 5 35 0 2185 116 0 3 chr17 60518351 60518643 -24919837 - AluSx SINE Alu -21 291 1 254 65 0 0 chr17 60518680 60518711 -24919769 + Alu SINE Alu 14 44 -255 1066 138 0 0 chr17 60518722 60518874 -24919606 + AluSg/x SINE Alu 142 293 -19 29 0 0 0 chr17 60519162 60519191 -24919289 + AT_rich Low_complexity Low_complexity 1 29 0 740 90 90 0 chr17 60519196 60519341 -24919139 - Tigger3(Golem) DNA MER2_type -490 2539 2382 2204 111 3 3 chr17 60519354 60519651 -24918829 - AluSg SINE Alu -13 297 1 374 169 0 0 chr17 60519667 60519726 -24918754 + AluS SINE Alu 6 64 -244 685 145 8 8 chr17 60519732 60519849 -24918631 + AluJb SINE Alu 105 221 -91 218 232 146 0 chr17 60520383 60520465 -24918015 - MIR SINE MIR -38 224 131 195 349 16 0 chr17 60520839 60520902 -24917578 - L2 LINE L2 -5 3267 3204 2327 106 0 0 chr17 60520949 60521252 -24917228 + AluY SINE Alu 1 303 -8 2495 79 3 0 chr17 60521372 60521675 -24916805 - AluSp SINE Alu -9 304 1 339 98 0 0 chr17 60521679 60521730 -24916750 - Alu SINE Alu 0 300 250 987 154 0 0 chr17 60521731 60521874 -24916606 - AluSq/x SINE Alu -169 143 1 1728 158 3 11 chr17 60522231 60522545 -24915935 - AluJb SINE Alu 0 312 1 192 40 0 0 chr17 60522596 60522621 -24915859 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1795 155 0 46 chr17 60522852 60523180 -24915300 + AluSx SINE Alu 1 314 0 22 35 0 0 chr17 60523761 60523790 -24914690 + AT_rich Low_complexity Low_complexity 1 29 0 2244 113 0 16 chr17 60523822 60524132 -24914348 - AluSx SINE Alu -7 305 1 22 56 0 0 chr17 60524651 60524687 -24913793 + AT_rich Low_complexity Low_complexity 1 36 0 2126 60 0 26 chr17 60525294 60525562 -24912918 - AluY SINE Alu -16 295 35 14376 102 48 125 chr17 60525590 60526121 -24912359 - Tigger4(Zombi) DNA MER2_type 0 2731 2161 2682 42 3 0 chr17 60526121 60526430 -24912050 - AluY SINE Alu -1 310 1 2040 155 0 0 chr17 60526432 60526728 -24911752 - AluSx SINE Alu -16 296 1 14376 102 48 125 chr17 60526728 60527196 -24911284 - Tigger4(Zombi) DNA MER2_type -571 2160 1658 2393 81 3 0 chr17 60527196 60527491 -24910989 - AluSg SINE Alu -14 296 1 14376 102 48 125 chr17 60527491 60527735 -24910745 - Tigger4(Zombi) DNA MER2_type -1073 1658 1397 743 151 0 0 chr17 60527735 60527841 -24910639 + FLAM_C SINE Alu 2 107 -36 14376 102 48 125 chr17 60527841 60528036 -24910444 - Tigger4(Zombi) DNA MER2_type -1334 1397 1189 2628 65 0 0 chr17 60528036 60528345 -24910135 + AluY SINE Alu 1 309 -2 14376 102 48 125 chr17 60528345 60528980 -24909500 - Tigger4(Zombi) DNA MER2_type -1542 1189 815 2549 68 3 0 chr17 60528980 60529291 -24909189 + AluSp SINE Alu 1 312 -1 14376 102 48 125 chr17 60529291 60529964 -24908516 - Tigger4(Zombi) DNA MER2_type -1916 815 92 26 30 0 0 chr17 60529966 60529999 -24908481 + AT_rich Low_complexity Low_complexity 1 33 0 1091 65 0 14 chr17 60529999 60530137 -24908343 + AluSq/x SINE Alu 1 136 -177 1483 70 0 0 chr17 60530137 60530308 -24908172 + AluSq SINE Alu 1 171 -142 22 0 0 0 chr17 60530472 60530494 -24907986 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr17 60530589 60530620 -24907860 + AT_rich Low_complexity Low_complexity 1 31 0 2173 118 10 10 chr17 60530634 60530947 -24907533 - AluSp SINE Alu 0 313 1 2230 120 0 0 chr17 60531190 60531491 -24906989 - AluSx SINE Alu -11 301 1 1241 179 112 22 chr17 60531562 60531830 -24906650 + AluJo SINE Alu 1 292 -20 2456 95 0 0 chr17 60531837 60532143 -24906337 + AluSc SINE Alu 1 306 -3 2190 86 61 0 chr17 60532468 60532748 -24905732 + AluSg SINE Alu 1 297 -13 23 33 0 0 chr17 60532778 60532808 -24905672 + AT_rich Low_complexity Low_complexity 1 30 0 1893 100 0 80 chr17 60532879 60532992 -24905488 + AluSx SINE Alu 22 142 -170 2077 96 44 0 chr17 60532992 60533288 -24905192 + AluSp SINE Alu 1 308 0 1893 100 0 80 chr17 60533288 60533472 -24905008 + AluSx SINE Alu 142 296 -16 2185 103 0 7 chr17 60533797 60534087 -24904393 - AluSx SINE Alu -24 288 1 426 152 0 0 chr17 60534243 60534309 -24904171 - AluJb SINE Alu -34 278 213 1634 186 40 0 chr17 60534327 60534628 -24903852 - AluSq SINE Alu 0 313 1 810 216 5 37 chr17 60534647 60534837 -24903643 - AluJb SINE Alu -19 293 110 360 351 30 0 chr17 60534942 60535073 -24903407 + MIR3 SINE MIR 44 178 -30 1949 158 0 20 chr17 60535086 60535389 -24903091 + AluSx SINE Alu 1 297 -15 1811 168 28 3 chr17 60535459 60535750 -24902730 - AluJo SINE Alu -11 301 4 800 185 0 0 chr17 60536058 60536188 -24902292 - FLAM_A SINE Alu -3 130 1 21 0 0 0 chr17 60536229 60536250 -24902230 + AT_rich Low_complexity Low_complexity 1 21 0 218 31 0 31 chr17 60536645 60536677 -24901803 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2269 96 0 10 chr17 60536689 60536982 -24901498 - AluSq SINE Alu -23 290 1 23 0 0 0 chr17 60536988 60537011 -24901469 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr17 60537680 60537719 -24900761 + AT_rich Low_complexity Low_complexity 1 39 0 499 242 0 0 chr17 60537760 60537890 -24900590 - AluJb SINE Alu 0 320 191 249 245 0 0 chr17 60537928 60537981 -24900499 - AluSp SINE Alu -115 188 136 34 65 0 0 chr17 60538056 60538118 -24900362 + AT_rich Low_complexity Low_complexity 1 62 0 340 280 58 14 chr17 60538130 60538167 -24900313 + L1ME4a LINE L1 5661 5695 -426 2235 95 7 10 chr17 60538167 60538462 -24900018 + AluSx SINE Alu 1 294 -18 340 280 58 14 chr17 60538462 60538594 -24899886 + L1ME4a LINE L1 5695 5836 -285 2113 157 83 5 chr17 60538602 60539011 -24899469 + L1MC1 LINE L1 5888 6328 -5 2175 90 0 0 chr17 60539029 60539296 -24899184 + AluSx SINE Alu 1 267 -45 699 108 9 9 chr17 60539360 60539471 -24899009 - AluSg/x SINE Alu -3 306 196 708 121 47 40 chr17 60539702 60539730 -24898750 + MER53 DNA DNA 8 34 -155 2189 114 3 0 chr17 60539730 60540027 -24898453 + AluSq SINE Alu 1 298 -15 708 121 47 40 chr17 60540027 60540147 -24898333 + MER53 DNA DNA 34 157 -32 956 206 41 95 chr17 60540158 60540473 -24898007 - AluJb SINE Alu 0 302 5 2456 54 0 13 chr17 60540737 60541035 -24897445 + AluY SINE Alu 1 294 -17 22 0 0 0 chr17 60541112 60541134 -24897346 + AT_rich Low_complexity Low_complexity 1 22 0 6124 128 251 25 chr17 60542111 60543495 -24894985 + pTR5 LTR ERV1 743 2438 0 630 162 0 0 chr17 60544248 60544353 -24894127 - AluJ SINE Alu -25 287 183 405 181 124 29 chr17 60544345 60544450 -24894030 - AluJ SINE Alu -162 150 36 * 1644 164 7 30 chr17 60545102 60545240 -24893240 + AluJo SINE Alu 1 141 -171 1515 182 73 0 chr17 60545240 60545515 -24892965 + AluSx SINE Alu 2 296 -16 1644 164 7 30 chr17 60545515 60545681 -24892799 + AluJo SINE Alu 141 298 -14 2236 131 0 0 chr17 60546445 60546757 -24891723 - AluSx SINE Alu 0 312 1 1426 201 49 0 chr17 60547494 60547778 -24890702 + AluJo SINE Alu 1 298 -14 1906 148 7 0 chr17 60547816 60548107 -24890373 + AluSx SINE Alu 5 297 -15 1895 127 42 7 chr17 60548730 60549040 -24889440 - AluSg SINE Alu 0 310 7 893 199 0 0 chr17 60549040 60549196 -24889284 - FRAM SINE Alu -20 156 1 2223 122 0 0 chr17 60549888 60550191 -24888289 - AluSx SINE Alu -9 303 1 2120 127 13 0 chr17 60550258 60550566 -24887914 - AluSx SINE Alu 0 312 1 815 203 7 7 chr17 60550571 60550724 -24887756 - FRAM SINE Alu -21 155 3 2397 90 3 0 chr17 60550738 60551048 -24887432 - AluY SINE Alu 0 311 1 183 80 0 0 chr17 60551561 60551586 -24886894 + (CCCCAA)n Simple_repeat Simple_repeat 6 30 0 2062 153 0 6 chr17 60551773 60552087 -24886393 - AluSx SINE Alu 0 312 1 2267 121 0 3 chr17 60552146 60552452 -24886028 - AluSx SINE Alu -7 305 1 1557 172 10 34 chr17 60553575 60553872 -24884608 + AluJo SINE Alu 1 290 -22 2205 106 3 3 chr17 60553939 60554240 -24884240 + AluSq SINE Alu 1 301 -12 259 355 76 15 chr17 60554326 60554588 -24883892 - L3 LINE CR1 -156 1421 1144 795 169 0 22 chr17 60554620 60554756 -24883724 - FLAM_C SINE Alu 0 133 1 1962 213 94 81 chr17 60555330 60555882 -24882598 - MER92B LTR ERV1 0 636 74 699 159 0 58 chr17 60555882 60556020 -24882460 - FLAM_A SINE Alu 0 133 4 1962 213 94 81 chr17 60556020 60556095 -24882385 - MER92B LTR ERV1 -562 74 1 1973 148 6 3 chr17 60556144 60556455 -24882025 - AluJb SINE Alu 0 312 1 329 238 63 23 chr17 60556522 60556667 -24881813 + L1MC4a LINE L1 5221 5378 -770 917 213 43 106 chr17 60556667 60557007 -24881473 + AluJb SINE Alu 2 322 0 329 238 63 23 chr17 60557007 60557037 -24881443 + L1MC4a LINE L1 5378 5405 -743 2044 121 14 0 chr17 60557052 60557332 -24881148 + AluSx SINE Alu 1 284 -28 2405 84 7 0 chr17 60557343 60557640 -24880840 + AluSx SINE Alu 1 299 -13 956 279 34 11 chr17 60557701 60557966 -24880514 - MLT1J LTR MaLR -240 271 1 308 297 119 35 chr17 60557970 60558172 -24880308 + L1MC4a LINE L1 5406 5624 -2184 560 283 16 11 chr17 60558182 60558369 -24880111 + L1MC4a LINE L1 5679 5866 -1942 2010 136 0 3 chr17 60558417 60558737 -24879743 + AluSx SINE Alu 1 319 0 2039 89 0 36 chr17 60558812 60559092 -24879388 + AluSx SINE Alu 36 305 -7 558 320 8 10 chr17 60559143 60559411 -24879069 - MLT1K LTR MaLR 0 588 286 1185 244 88 33 chr17 60559596 60559795 -24878685 + LTR33A LTR ERVL 54 240 -283 2400 112 0 0 chr17 60559795 60560107 -24878373 - AluSx SINE Alu 0 312 1 1185 244 88 33 chr17 60560107 60560337 -24878143 + LTR33A LTR ERVL 240 507 -16 352 186 0 47 chr17 60560486 60560549 -24877931 + MIR SINE MIR 94 154 -108 1487 226 116 30 chr17 60560549 60561014 -24877466 + MLT1D LTR MaLR 1 505 0 352 186 0 47 chr17 60561014 60561036 -24877444 + MIR SINE MIR 154 175 -87 2153 115 41 54 chr17 60561036 60561428 -24877052 - MLT1B LTR MaLR 0 390 4 737 189 0 0 chr17 60561676 60561798 -24876682 - FLAM_C SINE Alu -20 123 2 209 261 217 17 chr17 60561814 60561929 -24876551 + L2 LINE L2 3134 3271 -1 198 128 0 0 chr17 60562229 60562268 -24876212 + (TCC)n Simple_repeat Simple_repeat 1 39 0 360 0 0 0 chr17 60562856 60562896 -24875584 + (CA)n Simple_repeat Simple_repeat 1 40 0 694 155 0 0 chr17 60563495 60563598 -24874882 + FLAM_C SINE Alu 14 116 -27 539 203 34 20 chr17 60564132 60564280 -24874200 - L1ME4a LINE L1 -5 6116 5967 1886 157 0 29 chr17 60564387 60564700 -24873780 + AluJo SINE Alu 1 304 -8 2139 126 3 3 chr17 60564958 60565267 -24873213 - AluSx SINE Alu -3 309 1 306 277 32 0 chr17 60565295 60565389 -24873091 - L1ME4a LINE L1 -414 5707 5611 2310 81 24 0 chr17 60565441 60565737 -24872743 - AluSg1 SINE Alu -6 303 1 2131 94 0 0 chr17 60565845 60566110 -24872370 - AluY SINE Alu -14 297 33 1939 138 25 3 chr17 60566429 60566712 -24871768 + AluJb SINE Alu 1 289 -23 2053 129 0 26 chr17 60566845 60566985 -24871495 + AluSx SINE Alu 1 143 -169 2311 99 0 0 chr17 60566985 60567279 -24871201 + AluSg SINE Alu 1 294 -16 2053 129 0 26 chr17 60567279 60567447 -24871033 + AluSx SINE Alu 143 301 -11 666 281 23 138 chr17 60567512 60568032 -24870448 - L2 LINE L2 -9 3263 2804 740 212 0 7 chr17 60568905 60569042 -24869438 + AluJo SINE Alu 2 137 -175 2469 53 0 0 chr17 60569074 60569383 -24869097 - AluY SINE Alu 0 309 1 876 114 0 30 chr17 60569385 60569516 -24868964 - AluJo/FLAM SINE Alu -175 127 1 28 0 0 26 chr17 60569526 60569545 -24868935 + AT_rich Low_complexity Low_complexity 1 19 -19 1676 74 4 9 chr17 60569545 60569774 -24868706 - L1PB1 LINE L1 -1 6150 5923 28 0 0 26 chr17 60569774 60569793 -24868687 + AT_rich Low_complexity Low_complexity 19 38 0 340 263 32 70 chr17 60569848 60570004 -24868476 - MLT1J LTR MaLR -172 339 190 2246 106 27 0 chr17 60570280 60570581 -24867899 + AluSq SINE Alu 1 309 -4 1544 145 48 62 chr17 60570882 60571172 -24867308 + AluJo SINE Alu 13 298 -14 1544 145 48 62 chr17 60571628 60571918 -24866562 + AluJo SINE Alu 13 298 -14 1101 194 5 37 chr17 60572167 60572384 -24866096 + AluJo SINE Alu 86 295 -17 207 0 0 0 chr17 60572546 60572569 -24865911 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1566 111 0 0 chr17 60572571 60572770 -24865710 - AluSg/x SINE Alu -21 289 91 1788 109 98 11 chr17 60572877 60573151 -24865329 + AluSx SINE Alu 3 300 -12 2070 136 0 7 chr17 60573410 60573718 -24864762 + AluJb SINE Alu 1 306 -6 2000 161 0 13 chr17 60573718 60574034 -24864446 + AluSx SINE Alu 1 312 0 1848 173 3 10 chr17 60574045 60574346 -24864134 + AluJo SINE Alu 1 299 -13 2355 78 17 0 chr17 60574718 60575011 -24863469 + AluSq SINE Alu 1 298 -15 26 0 0 0 chr17 60575028 60575054 -24863426 + AT_rich Low_complexity Low_complexity 1 26 0 2091 147 0 16 chr17 60575062 60575375 -24863105 + AluSx SINE Alu 1 308 -4 1810 176 3 10 chr17 60575383 60575684 -24862796 + AluJo SINE Alu 1 299 -13 2308 86 17 0 chr17 60576055 60576346 -24862134 + AluSq SINE Alu 1 296 -17 26 0 0 0 chr17 60576363 60576389 -24862091 + AT_rich Low_complexity Low_complexity 1 26 0 2081 140 3 13 chr17 60576397 60576712 -24861768 + AluJb SINE Alu 1 312 0 2477 71 0 0 chr17 60576922 60577217 -24861263 + AluY SINE Alu 1 295 -16 1922 130 3 48 chr17 60577259 60577574 -24860906 + AluSx SINE Alu 2 302 -10 2028 127 7 0 chr17 60577586 60577870 -24860610 + AluSx SINE Alu 1 286 -26 337 51 112 0 chr17 60577870 60577968 -24860512 + (TA)n Simple_repeat Simple_repeat 1 109 0 430 202 8 70 chr17 60578065 60578101 -24860379 - L1ME3A LINE L1 -223 5947 5910 2282 114 0 0 chr17 60578101 60578408 -24860072 + AluSc SINE Alu 1 307 -2 430 202 8 70 chr17 60578408 60578500 -24859980 - L1ME3A LINE L1 -260 5910 5827 1231 92 30 0 chr17 60578673 60578837 -24859643 - AluSg/x SINE Alu -16 294 126 2586 47 3 0 chr17 60578838 60579139 -24859341 - AluSq SINE Alu -3 310 9 892 142 0 8 chr17 60583005 60583132 -24855348 + FLAM_C SINE Alu 1 126 -17 2075 99 0 33 chr17 60583301 60583603 -24854877 + AluSx SINE Alu 1 292 -20 2084 115 16 3 chr17 60583703 60584007 -24854473 - AluSg SINE Alu -2 308 1 441 0 0 0 chr17 60584670 60584719 -24853761 + (T)n Simple_repeat Simple_repeat 1 49 0 21 0 0 0 chr17 60585393 60585414 -24853066 + AT_rich Low_complexity Low_complexity 1 21 0 1567 94 5 0 chr17 60585552 60585754 -24852726 - AluSx SINE Alu -64 248 46 1089 96 0 0 chr17 60585754 60585890 -24852590 - AluSq/x SINE Alu -177 136 1 2316 79 14 3 chr17 60586097 60586388 -24852092 - AluSx SINE Alu -18 294 1 690 202 0 8 chr17 60586388 60586512 -24851968 - AluJo SINE Alu -177 135 13 335 353 29 7 chr17 60587047 60587183 -24851297 + MIR3 SINE MIR 16 154 -54 422 194 68 39 chr17 60587184 60587203 -24851277 + L1 LINE L1 4077 4094 -2052 2030 158 0 3 chr17 60587203 60587514 -24850966 - AluJo SINE Alu -2 310 1 422 194 68 39 chr17 60587514 60587597 -24850883 + L1 LINE L1 4094 4182 -1964 1178 158 0 11 chr17 60587597 60587787 -24850693 + AluSx SINE Alu 4 191 -121 522 99 14 0 chr17 60587789 60587860 -24850620 + AluSc SINE Alu 59 130 -179 2774 137 7 5 chr17 60587863 60588285 -24850195 + MER50 LTR ERV1 289 711 -23 27 0 0 0 chr17 60588399 60588426 -24850054 + AT_rich Low_complexity Low_complexity 1 27 0 2097 111 48 124 chr17 60588561 60588699 -24849781 + MER61B LTR ERV1 1 148 -277 2056 129 13 13 chr17 60588699 60589001 -24849479 - AluSq SINE Alu -11 302 1 2097 111 48 124 chr17 60589001 60589022 -24849458 + MER61B LTR ERV1 148 169 -256 1993 136 35 0 chr17 60589022 60589308 -24849172 - AluSx SINE Alu -16 296 1 2097 111 48 124 chr17 60589308 60589607 -24848873 + MER61B LTR ERV1 169 425 0 2104 130 0 0 chr17 60589862 60590170 -24848310 + AluSx SINE Alu 1 308 0 2146 111 10 0 chr17 60590279 60590576 -24847904 - AluSq SINE Alu -13 300 1 1973 107 3 21 chr17 60590605 60590894 -24847586 + AluSq SINE Alu 1 284 -29 2684 139 45 5 chr17 60591015 60591460 -24847020 - Tigger3(Golem) DNA MER2_type -2 3027 2565 234 0 0 0 chr17 60591661 60591687 -24846793 + (A)n Simple_repeat Simple_repeat 1 26 0 2190 86 61 0 chr17 60592009 60592289 -24846191 + AluSg SINE Alu 1 297 -13 23 33 0 0 chr17 60592319 60592349 -24846131 + AT_rich Low_complexity Low_complexity 1 30 0 1893 100 0 80 chr17 60592420 60592533 -24845947 + AluSx SINE Alu 22 142 -170 2077 96 44 0 chr17 60592533 60592829 -24845651 + AluSp SINE Alu 1 308 0 1893 100 0 80 chr17 60592829 60593013 -24845467 + AluSx SINE Alu 142 296 -16 2185 103 0 7 chr17 60593338 60593628 -24844852 - AluSx SINE Alu -24 288 1 415 138 15 0 chr17 60593784 60593849 -24844631 - AluJb SINE Alu -34 278 213 2304 90 36 0 chr17 60593867 60594168 -24844312 - AluSx SINE Alu 0 312 1 1968 122 3 20 chr17 60594187 60594490 -24843990 - AluJo SINE Alu -14 298 1 208 211 0 0 chr17 60595318 60595356 -24843124 + (CCG)n Simple_repeat Simple_repeat 3 40 0 270 0 0 0 chr17 60596240 60596270 -24842210 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2255 81 7 3 chr17 60596961 60597295 -24841185 - AluY SINE Alu 0 311 1 2404 93 3 0 chr17 60597306 60597618 -24840862 - AluSq SINE Alu 0 313 1 973 123 0 0 chr17 60598582 60598712 -24839768 + AluSg/x SINE Alu 151 280 -32 422 145 0 0 chr17 60598768 60598830 -24839650 - AluJ/FRAM SINE Alu -22 290 229 2007 166 131 38 chr17 60598838 60599144 -24839336 + Charlie1 DNA MER1_type 1981 2257 -504 2496 64 0 10 chr17 60599144 60599458 -24839022 + AluY SINE Alu 1 311 0 2007 166 131 38 chr17 60599458 60599473 -24839007 + Charlie1 DNA MER1_type 2257 2269 -492 958 193 24 0 chr17 60599473 60599639 -24838841 + FAM SINE Alu 1 170 -5 2007 166 131 38 chr17 60599639 60599879 -24838601 + Charlie1 DNA MER1_type 2269 2599 -162 1976 133 6 43 chr17 60599879 60600201 -24838279 - AluSx SINE Alu -2 310 1 534 156 33 0 chr17 60600250 60600340 -24838140 - L1MC4a LINE L1 -499 7309 7217 413 103 0 0 chr17 60600366 60600424 -24838056 - Alu SINE Alu -259 59 2 2119 137 3 0 chr17 60600511 60600818 -24837662 - AluSx SINE Alu -4 308 1 518 174 74 16 chr17 60600818 60600939 -24837541 - L1MC4 LINE L1 -982 7060 6933 2083 103 3 21 chr17 60601492 60601774 -24836706 - AluSq SINE Alu -32 281 5 2105 108 25 0 chr17 60601951 60602229 -24836251 + AluSx SINE Alu 11 295 -17 24 32 0 0 chr17 60602337 60602368 -24836112 + AT_rich Low_complexity Low_complexity 1 31 0 183 204 0 0 chr17 60602413 60602457 -24836023 + (TAA)n Simple_repeat Simple_repeat 3 46 0 404 173 28 200 chr17 60602485 60602685 -24835795 - MER104 DNA Tc2 -1720 178 16 2293 111 0 7 chr17 60602685 60602991 -24835489 + AluSx SINE Alu 1 304 -8 404 173 28 200 chr17 60602991 60603005 -24835475 - MER104 DNA Tc2 -1882 16 1 303 237 113 21 chr17 60603053 60603150 -24835330 - MIR SINE MIR -155 107 2 2058 133 17 0 chr17 60603400 60603693 -24834787 + AluJo SINE Alu 1 298 -14 575 122 78 0 chr17 60603786 60603876 -24834604 + Tigger4(Zombi) DNA MER2_type 1 97 -2634 1182 117 6 0 chr17 60603916 60604127 -24834353 - AluSg/x SINE Alu 0 332 121 1374 83 12 0 chr17 60604148 60604317 -24834163 - AluSq SINE Alu -142 171 1 760 147 0 22 chr17 60604320 60604456 -24834024 - AluJo/FLAM SINE Alu -169 133 1 26 30 0 0 chr17 60604456 60604489 -24833991 + AT_rich Low_complexity Low_complexity 1 33 0 3687 138 16 53 chr17 60604491 60605164 -24833316 + Tigger4(Zombi) DNA MER2_type 92 830 -1901 2582 74 3 0 chr17 60605164 60605475 -24833005 - AluSp SINE Alu -1 312 1 360 59 0 0 chr17 60605479 60605530 -24832950 - Alu SINE Alu 0 301 251 1017 140 0 0 chr17 60605531 60605674 -24832806 - AluSq/x SINE Alu -170 143 1 1728 158 3 11 chr17 60606031 60606345 -24832135 - AluJb SINE Alu 0 312 1 192 40 0 0 chr17 60606396 60606421 -24832059 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1795 155 0 46 chr17 60606652 60606980 -24831500 + AluSx SINE Alu 1 314 0 22 35 0 0 chr17 60607561 60607590 -24830890 + AT_rich Low_complexity Low_complexity 1 29 0 2224 113 0 16 chr17 60607622 60607931 -24830549 - AluSx SINE Alu -8 304 1 22 56 0 0 chr17 60608450 60608486 -24829994 + AT_rich Low_complexity Low_complexity 1 36 0 2126 60 0 26 chr17 60609093 60609361 -24829119 - AluY SINE Alu -16 295 35 7931 109 17 36 chr17 60609389 60609920 -24828560 - Tigger4(Zombi) DNA MER2_type 0 2731 2191 2682 42 3 0 chr17 60609920 60610229 -24828251 - AluY SINE Alu -1 310 1 2040 155 0 0 chr17 60610231 60610527 -24827953 - AluSx SINE Alu -16 296 1 7931 109 17 36 chr17 60610527 60610995 -24827485 - Tigger4(Zombi) DNA MER2_type -541 2190 1755 2393 81 3 0 chr17 60610995 60611290 -24827190 - AluSg SINE Alu -14 296 1 7931 109 17 36 chr17 60611290 60611532 -24826948 - Tigger4(Zombi) DNA MER2_type -976 1755 1510 743 151 0 0 chr17 60611534 60611640 -24826840 + FLAM_C SINE Alu 2 107 -36 676 132 0 9 chr17 60611643 60611749 -24826731 - Tigger4(Zombi) DNA MER2_type -189 2542 2438 21 36 0 0 chr17 60611749 60611777 -24826703 + AT_rich Low_complexity Low_complexity 1 28 0 255 241 8 99 chr17 60611788 60611835 -24826645 - Tigger4(Zombi) DNA MER2_type -1222 1509 1459 2380 79 3 7 chr17 60611835 60612140 -24826340 + AluY SINE Alu 1 304 -7 255 241 8 99 chr17 60612140 60612354 -24826126 - Tigger4(Zombi) DNA MER2_type -1272 1459 1272 1117 185 19 0 chr17 60612895 60613111 -24825369 + AluSg/x SINE Alu 67 286 -26 337 51 112 0 chr17 60613111 60613209 -24825271 + (TA)n Simple_repeat Simple_repeat 1 109 0 430 202 8 70 chr17 60613306 60613342 -24825138 - L1ME3A LINE L1 -223 5947 5910 2291 114 0 0 chr17 60613342 60613650 -24824830 + AluSc SINE Alu 1 308 -1 430 202 8 70 chr17 60613650 60613742 -24824738 - L1ME3A LINE L1 -260 5910 5827 1159 107 41 0 chr17 60613915 60614084 -24824396 - AluSg/x SINE Alu -16 294 119 647 228 30 30 chr17 60614084 60614316 -24824164 - AluSp SINE Alu -9 304 73 2250 111 0 0 chr17 60614424 60614722 -24823758 - AluSx SINE Alu -14 298 1 1585 149 67 4 chr17 60616111 60616402 -24822078 - AluJb SINE Alu 0 308 1 1894 140 0 60 chr17 60617112 60617427 -24821053 + AluSx SINE Alu 1 296 -16 2369 93 0 3 chr17 60617429 60617731 -24820749 + AluY SINE Alu 1 301 -10 2165 116 3 0 chr17 60617794 60618087 -24820393 + AluSq SINE Alu 1 294 -19 2115 129 7 0 chr17 60618544 60618838 -24819642 - AluSx SINE Alu -16 296 1 185 192 0 39 chr17 60619148 60619200 -24819280 + CT-rich Low_complexity Low_complexity 1 50 0 528 271 150 58 chr17 60619316 60619555 -24818925 + L1ME LINE L1 5318 5534 -587 1745 185 10 3 chr17 60619555 60619847 -24818633 - AluJo SINE Alu -18 294 1 528 271 150 58 chr17 60619847 60620021 -24818459 + L1ME LINE L1 5534 5769 -352 1765 151 16 23 chr17 60620021 60620325 -24818155 + AluSx SINE Alu 1 302 -10 2279 92 0 30 chr17 60620335 60620639 -24817841 + AluSg SINE Alu 1 295 -15 833 73 278 0 chr17 60621037 60621188 -24817292 - AluY SINE Alu 0 311 119 2452 41 48 3 chr17 60621216 60621511 -24816969 + AluY SINE Alu 1 308 -3 2212 119 3 0 chr17 60621716 60622027 -24816453 + AluSx SINE Alu 1 312 0 2081 119 24 3 chr17 60622253 60622547 -24815933 + AluSx SINE Alu 1 300 -12 1845 168 20 0 chr17 60622611 60622909 -24815571 - AluJb SINE Alu -8 304 1 2133 103 6 19 chr17 60623405 60623717 -24814763 + AluSq SINE Alu 1 308 -5 718 144 75 92 chr17 60623779 60623953 -24814527 - MLT1B LTR MaLR -219 171 1 2243 102 0 7 chr17 60624211 60624506 -24813974 - AluSx SINE Alu -19 293 1 227 276 0 53 chr17 60625127 60625203 -24813277 - L2 LINE L2 -867 2447 2376 282 61 0 0 chr17 60625257 60625290 -24813190 + U2 snRNA snRNA 1 33 -155 531 302 68 5 chr17 60625379 60625571 -24812909 - MIR SINE MIR -10 252 49 2171 114 0 3 chr17 60625575 60625874 -24812606 - AluSq SINE Alu -15 298 1 1671 161 40 43 chr17 60626008 60626132 -24812348 + AluJo SINE Alu 1 124 -188 2344 94 3 7 chr17 60626132 60626440 -24812040 - AluSg SINE Alu -3 307 1 1671 161 40 43 chr17 60626440 60626619 -24811861 + AluJo SINE Alu 124 303 -9 1448 133 167 26 chr17 60626973 60627237 -24811243 - AluJo SINE Alu -1 301 1 536 179 98 18 chr17 60627625 60627737 -24810743 + FLAM_C SINE Alu 2 122 -21 434 162 54 0 chr17 60627763 60627837 -24810643 + AluJ/FRAM SINE Alu 220 297 -15 279 0 0 0 chr17 60627887 60627918 -24810562 + (CA)n Simple_repeat Simple_repeat 2 32 0 180 0 0 0 chr17 60627917 60627937 -24810543 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 1673 146 42 4 chr17 60627944 60628205 -24810275 - AluSx SINE Alu -23 289 19 702 171 0 8 chr17 60628250 60628379 -24810101 + FLAM_C SINE Alu 5 132 -11 2118 110 3 3 chr17 60628455 60628746 -24809734 + AluSx SINE Alu 1 291 -21 2302 111 0 0 chr17 60628756 60629054 -24809426 + AluSx SINE Alu 1 298 -14 2218 107 0 0 chr17 60629065 60629349 -24809131 + AluSx SINE Alu 1 285 -23 222 37 0 0 chr17 60629349 60629376 -24809104 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 5299 113 37 28 chr17 60629697 60630508 -24807972 - LTR5 LTR ERVK -151 818 1 2272 94 3 16 chr17 60630542 60630849 -24807631 - AluSq SINE Alu -10 303 1 1968 93 82 0 chr17 60631000 60631279 -24807201 + AluSg SINE Alu 1 302 -8 1812 176 0 10 chr17 60631525 60631826 -24806654 - AluJo SINE Alu -14 298 1 2444 90 0 0 chr17 60632209 60632509 -24805971 - AluSx SINE Alu -12 300 1 262 308 88 0 chr17 60632664 60632755 -24805725 - L2 LINE L2 -2 3270 3172 2200 115 7 0 chr17 60632846 60633142 -24805338 + AluSp SINE Alu 1 298 -15 1977 46 0 4 chr17 60633942 60634179 -24804301 + AluY SINE Alu 75 310 -1 279 0 0 0 chr17 60634221 60634252 -24804228 + (GTTTG)n Simple_repeat Simple_repeat 2 32 0 2001 134 0 10 chr17 60634282 60634580 -24803900 + AluSx SINE Alu 1 295 -17 787 156 0 8 chr17 60634588 60634710 -24803770 + FLAM_C SINE Alu 1 121 -12 254 246 0 0 chr17 60634732 60634789 -24803691 - L2 LINE L2 -47 3225 3169 2149 102 35 0 chr17 60634869 60635153 -24803327 - AluSx SINE Alu -18 294 1 773 151 0 0 chr17 60635484 60635603 -24802877 - FLAM_C SINE Alu -14 119 1 1306 194 159 3 chr17 60635619 60635902 -24802578 - MER58B DNA MER1_type -14 327 1 653 155 17 0 chr17 60636171 60636287 -24802193 - AluSx SINE Alu -1 311 194 1098 90 0 21 chr17 60636288 60636432 -24802048 - AluSx SINE Alu -171 141 1 753 178 0 0 chr17 60637179 60637324 -24801156 + FLAM_C SINE Alu 2 146 0 1957 115 3 64 chr17 60637336 60637666 -24800814 + AluSx SINE Alu 1 310 -2 2443 68 0 3 chr17 60637754 60638046 -24800434 - AluSg SINE Alu -19 291 1 352 196 45 54 chr17 60638050 60638131 -24800349 + L2 LINE L2 2471 2552 -762 2888 138 62 6 chr17 60638131 60638611 -24799869 + MER84 LTR ERV1 1 507 0 352 196 45 54 chr17 60638611 60638641 -24799839 + L2 LINE L2 2552 2581 -733 2305 100 3 10 chr17 60638676 60638986 -24799494 + AluSq SINE Alu 3 310 -3 743 212 55 55 chr17 60638994 60639249 -24799231 + L2 LINE L2 3059 3313 0 2263 104 3 16 chr17 60639587 60639903 -24798577 + AluSp SINE Alu 2 313 0 296 85 85 0 chr17 60640058 60640105 -24798375 - L1MA5A LINE L1 -7 6290 6240 748 151 8 0 chr17 60640148 60640267 -24798213 - L1MA5A LINE L1 -35 6262 6143 939 170 59 0 chr17 60640267 60640420 -24798060 - AluJb SINE Alu -22 290 129 302 100 45 9 chr17 60640445 60640560 -24797920 + CT-rich Low_complexity Low_complexity 1 119 0 1278 110 161 28 chr17 60640579 60640833 -24797647 - L1MA5A LINE L1 -146 6151 5864 2542 102 7 44 chr17 60640884 60641163 -24797317 + L1MA9 LINE L1 5556 5817 -495 2490 64 0 22 chr17 60641163 60641477 -24797003 + AluY SINE Alu 3 309 -2 2542 102 7 44 chr17 60641477 60641608 -24796872 + L1MA9 LINE L1 5817 5951 -361 2104 79 36 0 chr17 60641753 60642031 -24796449 + AluY SINE Alu 2 289 -22 207 0 0 0 chr17 60642046 60642069 -24796411 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 669 215 0 15 chr17 60642069 60642204 -24796276 + FLAM_A SINE Alu 1 133 0 2033 164 21 11 chr17 60642206 60642578 -24795902 + L1MA9 LINE L1 5937 6312 0 6119 73 18 70 chr17 60642697 60643123 -24795357 + L1PA12 LINE L1 5279 5632 -536 2165 129 0 3 chr17 60643123 60643432 -24795048 - AluSq SINE Alu -2 311 4 6119 73 18 70 chr17 60643432 60643939 -24794541 + L1PA12 LINE L1 5632 6164 -4 330 305 113 24 chr17 60643942 60644155 -24794325 - MIR SINE MIR 0 262 31 2116 128 7 0 chr17 60644242 60644538 -24793942 - AluSx SINE Alu -14 298 1 2200 120 0 0 chr17 60645114 60645414 -24793066 - AluSx SINE Alu -12 300 1 2474 78 3 3 chr17 60645441 60645747 -24792733 - AluSp SINE Alu -7 306 1 1444 226 20 0 chr17 60646028 60646325 -24792155 + AluJb SINE Alu 1 303 -9 2232 102 0 10 chr17 60646539 60646702 -24791778 - AluSx SINE Alu -16 296 136 2144 101 0 24 chr17 60646702 60647023 -24791457 - AluSg SINE Alu 0 310 1 2232 102 0 10 chr17 60647023 60647154 -24791326 - AluSx SINE Alu -176 136 5 29 47 0 0 chr17 60647168 60647211 -24791269 + AT_rich Low_complexity Low_complexity 1 43 0 2439 81 0 3 chr17 60647343 60647653 -24790827 + AluSg SINE Alu 1 309 -1 2068 123 13 3 chr17 60647755 60648064 -24790416 + AluSq SINE Alu 1 312 -1 312 91 0 0 chr17 60648064 60648108 -24790372 + (TA)n Simple_repeat Simple_repeat 2 45 0 742 160 7 56 chr17 60648351 60648495 -24789985 + AluJo SINE Alu 2 138 -174 2479 47 40 0 chr17 60648502 60648798 -24789682 + AluY SINE Alu 1 308 -3 2299 91 0 3 chr17 60648805 60649112 -24789368 + AluY SINE Alu 1 306 -5 2041 118 4 7 chr17 60649117 60649396 -24789084 + AluSq SINE Alu 1 278 -35 2284 89 4 0 chr17 60649397 60649706 -24788774 + AluSp SINE Alu 1 310 0 22 0 0 0 chr17 60649725 60649747 -24788733 + AT_rich Low_complexity Low_complexity 1 22 0 829 219 0 6 chr17 60649747 60649911 -24788569 + FRAM SINE Alu 1 155 -21 1842 141 0 4 chr17 60649918 60650194 -24788286 + AluJo SINE Alu 9 283 -29 681 198 11 9 chr17 60650204 60650365 -24788115 - MER34B LTR ERV1 -385 157 9 994 203 37 28 chr17 60650468 60650685 -24787795 - MER20 DNA MER1_type 0 219 1 3010 169 108 33 chr17 60650877 60651261 -24787219 + L1MC3 LINE L1 6184 6075 -269 2204 125 3 0 chr17 60651261 60651572 -24786908 + AluSx SINE Alu 1 312 0 3010 169 108 33 chr17 60651572 60651858 -24786622 + L1MC3 LINE L1 6074 6337 -7 2127 98 39 0 chr17 60651865 60652150 -24786330 - AluSx SINE Alu -16 296 1 1553 168 59 21 chr17 60652247 60652533 -24785947 - AluJo SINE Alu -15 297 1 2286 105 7 0 chr17 60652700 60652996 -24785484 - AluSp SINE Alu -15 298 1 2273 117 0 0 chr17 60652996 60653293 -24785187 - AluSx SINE Alu -15 297 1 265 198 70 70 chr17 60653386 60653472 -24785008 - MIR SINE MIR -91 171 86 876 172 50 11 chr17 60653631 60653811 -24784669 - AluSg1 SINE Alu -122 187 1 532 159 204 0 chr17 60653848 60653961 -24784519 + AluSp/q SINE Alu 160 295 -18 23 0 0 0 chr17 60653961 60653984 -24784496 + AT_rich Low_complexity Low_complexity 1 23 0 961 189 142 51 chr17 60653990 60654265 -24784215 + AluJo SINE Alu 2 301 -1 359 272 25 109 chr17 60654279 60654481 -24783999 - L1MC/D LINE L1 -2163 5645 5461 1105 114 0 0 chr17 60654481 60654647 -24783833 - AluSg/x SINE Alu -7 303 138 384 190 88 36 chr17 60654656 60654793 -24783687 - L1MC/D LINE L1 -2341 5467 5324 1970 105 3 59 chr17 60654858 60655181 -24783299 - AluSq SINE Alu -7 306 2 302 208 69 0 chr17 60655240 60655312 -24783168 + MIR SINE MIR 53 129 -133 715 237 185 17 chr17 60655317 60655416 -24783064 - MER46C DNA MER2_type -3 335 254 1886 116 3 11 chr17 60655416 60655726 -24782754 - AluSx SINE Alu 0 308 1 715 237 185 17 chr17 60655726 60655912 -24782568 - MER46C DNA MER2_type -84 254 1 260 289 0 52 chr17 60655913 60656010 -24782470 + MIR SINE MIR 170 261 -1 260 271 178 8 chr17 60656233 60656351 -24782129 + MIR SINE MIR 117 254 -8 1024 268 191 28 chr17 60657264 60657546 -24780934 - L2 LINE L2 0 3313 3078 1959 111 24 0 chr17 60657546 60657834 -24780646 - AluSx SINE Alu -16 296 2 1024 268 191 28 chr17 60657834 60658279 -24780201 - L2 LINE L2 -235 3078 2452 480 183 29 29 chr17 60659236 60659340 -24779140 - MIR3 SINE MIR -14 194 91 1339 26 0 0 chr17 60660266 60660421 -24778059 - L1PA4 LINE L1 -3 6152 5998 23 54 0 0 chr17 60661099 60661136 -24777344 + GC_rich Low_complexity Low_complexity 1 37 0 533 234 71 49 chr17 60662787 60662971 -24775509 + MER112 DNA MER1_type 72 259 -1 342 255 121 28 chr17 60662974 60663115 -24775365 - MER5A DNA MER1_type 0 189 36 336 24 0 0 chr17 60663821 60663862 -24774618 + (CA)n Simple_repeat Simple_repeat 1 41 0 545 280 171 65 chr17 60664529 60664809 -24773671 + L2 LINE L2 2700 2949 -364 2007 108 14 3 chr17 60664809 60665104 -24773376 - AluSx SINE Alu -14 298 1 545 280 171 65 chr17 60665104 60665374 -24773106 + L2 LINE L2 2949 3310 -3 581 255 165 9 chr17 60665715 60665927 -24772553 + MIR SINE MIR 16 260 -2 2540 36 0 7 chr17 60666435 60666743 -24771737 - AluY SINE Alu -5 306 1 340 329 7 35 chr17 60667041 60667184 -24771296 - MIR3 SINE MIR -65 143 5 198 0 0 0 chr17 60668358 60668380 -24770100 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 422 269 104 22 chr17 60668946 60669091 -24769389 + MIR SINE MIR 41 195 -67 2288 87 0 3 chr17 60669364 60669663 -24768817 - AluSq SINE Alu -15 298 1 2325 83 0 0 chr17 60669668 60669969 -24768511 - AluY SINE Alu -10 301 1 1995 82 7 20 chr17 60669973 60670265 -24768215 - AluSx SINE Alu -18 294 7 322 326 30 30 chr17 60670358 60670493 -24767987 + MIR3 SINE MIR 44 178 -30 1641 167 0 29 chr17 60670506 60670812 -24767668 + AluSx SINE Alu 1 297 -15 1716 107 7 73 chr17 60671258 60671376 -24767104 + AluSx SINE Alu 24 148 -164 1757 139 49 0 chr17 60671376 60671663 -24766817 - AluSq SINE Alu -12 301 1 1716 107 7 73 chr17 60671663 60671833 -24766647 + AluSx SINE Alu 148 293 -19 1970 111 28 0 chr17 60671844 60672132 -24766348 + AluSx SINE Alu 1 296 -16 833 147 0 49 chr17 60672484 60672627 -24765853 - AluJo SINE Alu -175 137 2 286 169 13 52 chr17 60672850 60672927 -24765553 - MLT1K LTR MaLR -307 281 208 1386 186 4 21 chr17 60673075 60673204 -24765276 + AluJo SINE Alu 13 143 -169 2162 105 3 0 chr17 60673204 60673509 -24764971 + AluSx SINE Alu 1 306 -6 1386 186 4 21 chr17 60673509 60673658 -24764822 + AluJo SINE Alu 143 286 -26 708 269 14 32 chr17 60673737 60673956 -24764524 - MLT1K LTR MaLR -13 575 361 24 0 0 0 chr17 60674207 60674231 -24764249 + AT_rich Low_complexity Low_complexity 1 24 0 840 124 0 16 chr17 60674443 60674572 -24763908 + FLAM_C SINE Alu 1 127 -16 2285 88 0 3 chr17 60674584 60674890 -24763590 + AluSq SINE Alu 1 305 -8 227 203 29 14 chr17 60674902 60674971 -24763509 - L1MCa LINE L1 -4362 2064 1995 225 200 0 0 chr17 60674943 60674998 -24763482 - L1MC4 LINE L1 -1339 6983 6929 * 604 168 221 0 chr17 60675027 60675158 -24763322 + AluJb SINE Alu 140 299 -13 1657 144 18 7 chr17 60675160 60675458 -24763022 + AluJb SINE Alu 1 301 0 352 211 0 70 chr17 60675654 60675768 -24762712 + L1ME LINE L1 5719 5824 -297 907 136 43 6 chr17 60675771 60675933 -24762547 + L1MD2 LINE L1 6179 6346 -13 23 92 0 0 chr17 60676680 60676745 -24761735 + AT_rich Low_complexity Low_complexity 1 65 0 2205 101 0 3 chr17 60677044 60677350 -24761130 - AluY SINE Alu -6 305 1 1790 137 0 60 chr17 60677352 60677667 -24760813 - AluSx SINE Alu -16 296 1 1482 149 67 4 chr17 60678377 60678668 -24759812 + AluJb SINE Alu 1 308 0 2134 110 0 0 chr17 60680057 60680356 -24758124 + AluSx SINE Alu 1 299 -13 2222 34 4 0 chr17 60680398 60680663 -24757817 - AluY SINE Alu -6 305 40 2082 131 0 0 chr17 60680663 60680969 -24757511 - AluSx SINE Alu -6 306 1 32 43 0 0 chr17 60681230 60681276 -24757204 + AT_rich Low_complexity Low_complexity 1 46 0 2268 113 0 0 chr17 60681772 60682082 -24756398 + AluSx SINE Alu 1 310 -2 186 103 0 0 chr17 60682085 60682114 -24756366 + (TA)n Simple_repeat Simple_repeat 1 29 0 1930 120 31 3 chr17 60683265 60683594 -24754886 + AluSx SINE Alu 1 337 0 317 303 115 37 chr17 60683912 60684094 -24754386 + MIR3 SINE MIR 60 199 -9 345 62 0 0 chr17 60684473 60684521 -24753959 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 2036 128 0 16 chr17 60684701 60685014 -24753466 + AluSx SINE Alu 1 308 -4 1986 107 13 3 chr17 60685360 60685658 -24752822 - AluSx SINE Alu -11 301 1 2107 110 17 0 chr17 60685883 60686183 -24752297 - AluSg SINE Alu -5 305 1 758 116 0 0 chr17 60686185 60686297 -24752183 - AluSg SINE Alu -5 304 193 1123 78 0 0 chr17 60686297 60686438 -24752042 - AluSg SINE Alu -169 141 1 2467 48 0 10 chr17 60686592 60686904 -24751576 - AluY SINE Alu -2 309 1 195 250 167 0 chr17 60687067 60687151 -24751329 - MIR SINE MIR 0 262 165 2058 113 10 0 chr17 60687232 60687532 -24750948 + AluSq SINE Alu 1 303 -10 200 217 0 0 chr17 60688533 60688579 -24749901 + (TA)n Simple_repeat Simple_repeat 2 47 0 226 81 0 0 chr17 60688752 60688789 -24749691 - L1MB3 LINE L1 -3 6180 6144 2198 104 0 3 chr17 60688792 60689089 -24749391 - AluSx SINE Alu -11 301 6 691 142 24 95 chr17 60689158 60689278 -24749202 - L1MB2 LINE L1 -32 6139 6033 1803 131 16 30 chr17 60689278 60689583 -24748897 - AluJb SINE Alu -11 301 1 691 142 24 95 chr17 60689583 60689631 -24748849 - L1MB2 LINE L1 -138 6033 5983 1512 181 11 11 chr17 60689665 60689946 -24748534 - AluJo SINE Alu -31 281 1 39 50 0 0 chr17 60689988 60690048 -24748432 + AT_rich Low_complexity Low_complexity 1 60 0 2143 102 0 0 chr17 60690058 60690351 -24748129 + AluSx SINE Alu 1 293 -19 2086 104 17 0 chr17 60690607 60690896 -24747584 + AluSq SINE Alu 1 294 -19 2118 118 0 3 chr17 60690899 60691203 -24747277 + AluSx SINE Alu 1 303 -9 2390 71 3 3 chr17 60691419 60691728 -24746752 + AluSp SINE Alu 1 309 -4 852 180 0 0 chr17 60691901 60692040 -24746440 + AluJo SINE Alu 26 164 -148 1741 241 101 46 chr17 60692040 60692280 -24746200 - L1MD2 LINE L1 -60 6299 6074 2259 85 20 0 chr17 60692280 60692585 -24745895 + AluSx SINE Alu 1 311 -1 1741 241 101 46 chr17 60692585 60692926 -24745554 - L1MD2 LINE L1 -285 6074 5686 271 191 0 0 chr17 60692927 60692977 -24745503 + MER101 LTR ERV1 365 507 -63 21 0 0 0 chr17 60692981 60693002 -24745478 + AT_rich Low_complexity Low_complexity 1 21 0 2420 21 0 10 chr17 60693008 60693296 -24745184 + AluYa5 SINE Alu 19 303 -8 768 165 0 0 chr17 60693296 60693411 -24745069 + AluJo SINE Alu 21 135 -177 1380 214 3 11 chr17 60693411 60693724 -24744756 + AluJb SINE Alu 1 311 0 290 184 122 5 chr17 60693734 60693846 -24744634 - L1MD2 LINE L1 -480 5686 5582 1811 127 0 0 chr17 60693944 60694204 -24744276 + AluSx SINE Alu 1 260 -52 710 93 31 0 chr17 60694365 60694462 -24744018 - HY3 scRNA scRNA -1 100 1 22 56 0 0 chr17 60694637 60694673 -24743807 + AT_rich Low_complexity Low_complexity 1 36 0 2065 98 0 0 chr17 60694676 60694952 -24743528 - AluSx SINE Alu -36 276 1 1918 146 0 9 chr17 60695127 60695442 -24743038 - AluJb SINE Alu 0 312 1 1901 109 32 45 chr17 60695450 60695626 -24742854 - AluSx SINE Alu -1 311 139 2541 49 0 0 chr17 60695626 60695932 -24742548 - AluY SINE Alu -5 306 1 1901 109 32 45 chr17 60695932 60696068 -24742412 - AluSx SINE Alu -173 139 3 440 161 0 35 chr17 60696070 60696157 -24742323 - FLAM_A SINE Alu -12 130 47 349 93 0 0 chr17 60696182 60696225 -24742255 + MER4E LTR ERV1 652 694 -72 30 0 0 0 chr17 60696230 60696260 -24742220 + AT_rich Low_complexity Low_complexity 1 30 0 809 144 0 0 chr17 60696260 60696378 -24742102 - FLAM_C SINE Alu -25 118 1 2156 108 3 0 chr17 60696659 60696954 -24741526 - AluSg SINE Alu -14 296 1 732 96 10 0 chr17 60697136 60697240 -24741240 + AluSq/x SINE Alu 2 106 -207 1876 63 79 0 chr17 60697240 60697493 -24740987 + AluY SINE Alu 19 291 -20 1742 100 96 0 chr17 60697493 60697763 -24740717 + AluSq SINE Alu 1 296 -17 364 301 170 24 chr17 60699857 60700146 -24738334 - L2 LINE L2 -557 2757 2427 810 127 0 0 chr17 60700174 60700284 -24738196 - FLAM_C SINE Alu -32 111 2 2055 107 0 0 chr17 60700578 60700859 -24737621 + AluSx SINE Alu 12 292 -20 1646 69 37 18 chr17 60700985 60701203 -24737277 - MER1B DNA MER1_type 0 339 118 409 335 170 9 chr17 60701879 60702091 -24736389 - MIR SINE MIR -15 247 2 309 310 149 35 chr17 60702775 60703030 -24735450 - L2 LINE L2 -102 3170 2887 194 273 55 0 chr17 60703052 60703107 -24735373 + L2 LINE L2 3214 3271 -1 951 243 45 25 chr17 60703181 60703391 -24735089 - MIR SINE MIR -13 249 32 711 189 47 0 chr17 60703391 60703518 -24734962 - FLAM_C SINE Alu 0 133 1 951 243 45 25 chr17 60703518 60703550 -24734930 - MIR SINE MIR -230 32 2 450 259 97 41 chr17 60704072 60704305 -24734175 - MIR SINE MIR 0 262 7 2437 31 41 0 chr17 60704996 60705290 -24733190 + AluY SINE Alu 1 306 -5 1882 109 15 0 chr17 60705551 60705818 -24732662 + AluSx SINE Alu 37 307 -5 464 224 48 48 chr17 60705818 60705943 -24732537 + MIR SINE MIR 47 171 -91 2145 117 0 0 chr17 60706036 60706333 -24732147 + AluSx SINE Alu 1 297 -15 2156 105 7 0 chr17 60706333 60706629 -24731851 + AluSp SINE Alu 1 298 -15 1441 168 59 21 chr17 60706796 60707082 -24731398 + AluJo SINE Alu 1 297 -15 2045 98 35 0 chr17 60707179 60707465 -24731015 + AluSx SINE Alu 1 296 -16 3073 172 104 33 chr17 60707472 60707758 -24730722 - L1MC2 LINE L1 -7 7765 7501 2157 122 0 0 chr17 60707758 60708070 -24730410 - AluSx SINE Alu 0 312 1 3073 172 104 33 chr17 60708070 60708460 -24730020 - L1MC2 LINE L1 -271 7501 6184 951 204 42 28 chr17 60708649 60708865 -24729615 + MER20 DNA MER1_type 1 219 0 675 195 16 7 chr17 60708968 60709129 -24729351 + MER34B LTR ERV1 9 157 -385 1769 142 0 0 chr17 60709139 60709414 -24729066 - AluJo SINE Alu -29 283 9 932 177 10 134 chr17 60709421 60709626 -24728854 - AluJb SINE Alu -21 291 62 219 36 0 0 chr17 60709626 60709654 -24728826 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2158 89 4 0 chr17 60709654 60709935 -24728545 - AluSp SINE Alu -31 282 1 932 177 10 134 chr17 60709935 60710033 -24728447 - AluJb SINE Alu -248 64 25 1578 145 67 3 chr17 60710070 60710353 -24728127 + AluSx SINE Alu 1 301 -11 362 193 48 0 chr17 60710500 60710583 -24727897 + LTR37B LTR ERV1 199 285 -183 1995 94 9 60 chr17 60710669 60710840 -24727640 - AluSx SINE Alu -9 303 154 270 0 0 0 chr17 60710840 60710870 -24727610 + (TG)n Simple_repeat Simple_repeat 1 30 0 1995 94 9 60 chr17 60710870 60711017 -24727463 - AluSx SINE Alu -158 154 1 358 242 31 23 chr17 60711033 60711161 -24727319 + LTR37B LTR ERV1 338 466 -2 335 247 24 0 chr17 60711161 60711246 -24727234 + L1MC/D LINE L1 5733 5819 -1989 205 273 125 23 chr17 60711251 60711339 -24727141 + L2 LINE L2 3186 3282 -31 451 264 12 37 chr17 60711563 60711726 -24726754 - MLT1H LTR MaLR -344 205 47 219 196 0 0 chr17 60711887 60711899 -24726581 + (TA)n Simple_repeat Simple_repeat 2 13 -39 2090 100 0 7 chr17 60711899 60712189 -24726291 + AluSx SINE Alu 1 288 -24 219 196 0 0 chr17 60712189 60712227 -24726253 + (TA)n Simple_repeat Simple_repeat 12 52 0 296 174 0 0 chr17 60712613 60712659 -24725821 - Alu SINE Alu -254 46 1 1616 175 19 10 chr17 60712668 60712977 -24725503 - AluSx SINE Alu 0 312 1 1925 142 0 3 chr17 60713141 60713452 -24725028 + AluSx SINE Alu 1 310 -2 781 215 45 75 chr17 60713811 60713858 -24724622 + Charlie7 DNA MER1_type 202 249 -2363 2315 62 0 7 chr17 60713858 60714162 -24724318 + AluY SINE Alu 3 304 -7 781 215 45 75 chr17 60714162 60714379 -24724101 + Charlie7 DNA MER1_type 249 458 -2154 2048 105 14 0 chr17 60714380 60714674 -24723806 + AluSx SINE Alu 1 298 -14 2228 97 3 0 chr17 60714674 60714983 -24723497 + AluY SINE Alu 1 310 -1 758 104 0 0 chr17 60715001 60715107 -24723373 - AluSq/x SINE Alu -206 107 2 1312 175 65 45 chr17 60715116 60715408 -24723072 - AluJo SINE Alu -3 299 2 2461 129 59 30 chr17 60715557 60716066 -24722414 - MLT2A2 LTR ERVL -7 547 1 1983 116 7 10 chr17 60716153 60716454 -24722026 - AluSx SINE Alu -12 300 1 355 248 43 51 chr17 60716454 60716540 -24721940 + L2 LINE L2 2466 2552 -762 2816 140 65 6 chr17 60716540 60717019 -24721461 + MER84 LTR ERV1 1 507 0 355 248 43 51 chr17 60717019 60717049 -24721431 + L2 LINE L2 2552 2581 -733 1678 85 8 13 chr17 60717084 60717319 -24721161 + AluSq SINE Alu 3 236 -77 235 224 214 41 chr17 60717529 60717627 -24720853 - L2 LINE L2 -2 3270 3156 345 298 48 0 chr17 60718458 60718562 -24719918 - L2 LINE L2 -1 3312 3204 236 89 111 22 chr17 60718709 60718754 -24719726 - MER58 DNA MER1_type 0 2420 2372 192 247 136 37 chr17 60719097 60719178 -24719302 + MIR3 SINE MIR 81 169 -39 1746 166 53 6 chr17 60720234 60720553 -24717927 + MLT1A1 LTR MaLR 1 334 -31 420 190 0 0 chr17 60720877 60720956 -24717524 - AluJ/FLAM SINE Alu -233 79 1 1791 133 39 3 chr17 60720980 60721266 -24717214 + AluSx SINE Alu 1 296 -16 180 0 0 0 chr17 60721266 60721286 -24717194 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 279 0 0 0 chr17 60721285 60721316 -24717164 + (TG)n Simple_repeat Simple_repeat 2 32 0 404 178 55 0 chr17 60721367 60721440 -24717040 - AluJ/FRAM SINE Alu -16 296 220 543 179 98 18 chr17 60721466 60721578 -24716902 - FLAM_C SINE Alu -21 122 2 1455 133 167 26 chr17 60721966 60722230 -24716250 + AluJo SINE Alu 1 301 -1 1465 163 41 44 chr17 60722584 60722763 -24715717 - AluJo SINE Alu -9 303 124 2321 88 3 0 chr17 60722763 60723069 -24715411 + AluSg SINE Alu 1 307 -3 1465 163 41 44 chr17 60723069 60723184 -24715296 - AluJo SINE Alu -188 124 10 2007 107 7 10 chr17 60723325 60723634 -24714846 + AluSq SINE Alu 1 308 -5 723 144 75 92 chr17 60723696 60723870 -24714610 - MLT1B LTR MaLR -219 171 1 2170 106 0 0 chr17 60724128 60724421 -24714059 - AluSx SINE Alu -19 293 1 249 276 0 53 chr17 60725042 60725118 -24713362 - L2 LINE L2 -867 2447 2376 282 61 0 0 chr17 60725172 60725205 -24713275 + U2 snRNA snRNA 1 33 -155 198 0 0 0 chr17 60725734 60725756 -24712724 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 422 269 104 22 chr17 60726322 60726467 -24712013 + MIR SINE MIR 41 195 -67 2288 87 0 3 chr17 60726740 60727039 -24711441 - AluSq SINE Alu -15 298 1 2234 86 3 3 chr17 60727044 60727345 -24711135 - AluY SINE Alu -10 301 1 1520 177 65 3 chr17 60727454 60727748 -24710732 - AluJo SINE Alu 0 312 1 2106 115 0 7 chr17 60728479 60728783 -24709697 + AluSx SINE Alu 1 302 -10 236 340 104 14 chr17 60732493 60732637 -24705843 - MIR SINE MIR -18 244 88 195 352 48 8 chr17 60732646 60732771 -24705709 - L2 LINE L2 -182 3090 2961 197 274 0 0 chr17 60733056 60733107 -24705373 + L2 LINE L2 3221 3271 -1 1180 105 5 26 chr17 60734126 60734317 -24704163 + AluSg/x SINE Alu 117 303 -9 759 179 0 51 chr17 60734320 60734501 -24703979 + AluJo/FRAM SINE Alu 137 309 0 2081 109 0 0 chr17 60734700 60734994 -24703486 - AluSx SINE Alu -12 300 7 1756 160 0 0 chr17 60735227 60735515 -24702965 - AluJb SINE Alu -11 301 14 2210 117 0 0 chr17 60735564 60735872 -24702608 - AluSx SINE Alu -4 308 1 479 246 54 78 chr17 60736341 60736476 -24702004 - MER5B DNA MER1_type 0 178 41 2017 124 7 0 chr17 60736476 60736782 -24701698 - AluSx SINE Alu -4 308 1 2146 131 0 0 chr17 60736786 60737098 -24701382 - AluSx SINE Alu 0 312 1 479 246 54 78 chr17 60737098 60737124 -24701356 - MER5B DNA MER1_type -140 38 16 1305 97 0 0 chr17 60737770 60737946 -24700534 - AluSg/x SINE Alu -8 304 129 2219 72 3 13 chr17 60737949 60738253 -24700227 - AluY SINE Alu -10 301 1 1994 143 0 0 chr17 60738706 60739006 -24699474 - AluSx SINE Alu -12 300 1 282 309 129 7 chr17 60739327 60739466 -24699014 + L2 LINE L2 3115 3270 -2 720 147 18 0 chr17 60741046 60741155 -24697325 - FLAM_C SINE Alu -26 117 7 2129 112 0 16 chr17 60741174 60741487 -24696993 - AluSx SINE Alu -4 308 1 274 315 43 0 chr17 60741500 60741592 -24696888 - MIR SINE MIR -14 248 153 395 206 20 49 chr17 60742022 60742124 -24696356 - MIR3 SINE MIR 0 208 110 343 284 0 20 chr17 60742244 60742346 -24696134 + MIR3 SINE MIR 85 184 -24 714 259 74 45 chr17 60742397 60742487 -24695993 + MIR SINE MIR 5 91 -171 1905 113 38 3 chr17 60742487 60742653 -24695827 - AluSx SINE Alu -7 305 123 204 40 0 0 chr17 60742653 60742678 -24695802 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1905 113 38 3 chr17 60742678 60742802 -24695678 - AluSx SINE Alu -189 123 5 714 259 74 45 chr17 60742802 60742954 -24695526 + MIR SINE MIR 91 254 -8 281 312 11 11 chr17 60744784 60744877 -24693603 + MIR SINE MIR 23 115 -93 215 194 36 201 chr17 60744902 60744957 -24693523 - L2 LINE L2 -48 3265 3245 1793 166 0 0 chr17 60744957 60745241 -24693239 - AluJb SINE Alu -15 297 14 215 194 36 201 chr17 60745241 60745324 -24693156 - L2 LINE L2 -68 3245 3150 329 342 0 0 chr17 60745557 60745668 -24692812 - L2 LINE L2 -500 2814 2704 342 253 62 119 chr17 60746191 60746311 -24692169 + MER5A DNA MER1_type 5 111 -78 579 256 81 0 chr17 60746311 60746471 -24692009 + MER96 DNA MER1_type 1 173 -2 342 253 62 119 chr17 60746471 60746544 -24691936 + MER5A DNA MER1_type 111 187 -2 707 260 35 15 chr17 60746721 60746921 -24691559 - MIR SINE MIR 0 262 59 2336 58 0 23 chr17 60746921 60747230 -24691250 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 60747232 60747255 -24691225 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 30 chr17 60749744 60749759 -24688721 + AT_rich Low_complexity Low_complexity 1 15 -17 1876 109 40 0 chr17 60749759 60750034 -24688446 - AluSg SINE Alu -24 286 1 22 0 0 30 chr17 60750034 60750051 -24688429 + AT_rich Low_complexity Low_complexity 15 32 0 262 313 125 16 chr17 60750897 60751025 -24687455 - MIR3 SINE MIR 0 208 67 308 305 93 16 chr17 60751614 60751765 -24686715 - MIR SINE MIR -63 145 8 455 239 188 42 chr17 60751766 60752005 -24686475 + L3 LINE CR1 1195 1468 -109 388 238 70 25 chr17 60752778 60752938 -24685542 + MIR SINE MIR 28 195 -13 448 253 58 104 chr17 60753034 60753085 -24685395 + MIR SINE MIR 29 81 -181 2025 117 7 0 chr17 60753085 60753385 -24685095 - AluSx SINE Alu -10 302 1 448 253 58 104 chr17 60753385 60753574 -24684906 + MIR SINE MIR 81 258 -4 1179 131 0 0 chr17 60753664 60753847 -24684633 + AluSq SINE Alu 131 313 0 412 249 111 80 chr17 60754758 60754983 -24683497 - MIR SINE MIR -11 251 20 2125 114 31 3 chr17 60755215 60755504 -24682976 - AluSx SINE Alu -15 297 1 317 238 71 12 chr17 60755895 60755979 -24682501 - L3b LINE CR1 -196 1387 1299 944 138 53 62 chr17 60756418 60756643 -24681837 + L1MB7 LINE L1 5943 6165 -19 225 0 0 0 chr17 60756724 60756749 -24681731 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1911 128 3 41 chr17 60756749 60757039 -24681441 - AluSx SINE Alu -33 279 1 501 273 14 74 chr17 60757112 60757137 -24681343 - MIR SINE MIR -50 212 187 2277 107 23 0 chr17 60757137 60757437 -24681043 - AluSx SINE Alu -5 307 1 501 273 14 74 chr17 60757437 60757627 -24680853 - MIR SINE MIR -75 187 10 271 324 59 0 chr17 60757674 60757776 -24680704 - MIR3 SINE MIR -6 202 95 462 302 48 48 chr17 60757926 60758115 -24680365 - MIR SINE MIR -65 197 9 367 260 246 3 chr17 60759337 60759625 -24678855 - Charlie7 DNA MER1_type 0 2612 2255 898 143 0 15 chr17 60759676 60759809 -24678671 - FLAM_C SINE Alu -11 132 2 359 216 62 0 chr17 60759890 60759987 -24678493 - Charlie7 DNA MER1_type -610 2002 1900 32 43 0 0 chr17 60760016 60760062 -24678418 + AT_rich Low_complexity Low_complexity 1 46 0 237 189 57 0 chr17 60760062 60760115 -24678365 - L1ME1 LINE L1 -19 6147 6092 2303 66 84 0 chr17 60760184 60760471 -24678009 + AluY SINE Alu 1 311 0 378 0 0 0 chr17 60760476 60760518 -24677962 + (TA)n Simple_repeat Simple_repeat 2 43 0 1028 208 102 4 chr17 60760669 60761018 -24677462 - L1ME1 LINE L1 -293 5873 5458 420 191 48 29 chr17 60761024 60761129 -24677351 - L1ME1 LINE L1 -988 5158 5052 357 235 181 27 chr17 60761342 60761563 -24676917 - Charlie7 DNA MER1_type -2296 316 62 844 238 47 74 chr17 60761982 60762154 -24676326 + L1ME1 LINE L1 5766 5941 -225 2116 114 3 30 chr17 60762154 60762451 -24676029 + AluJo SINE Alu 1 289 -23 844 238 47 74 chr17 60762451 60762685 -24675795 + L1ME1 LINE L1 5941 6161 -5 503 322 103 77 chr17 60762718 60762907 -24675573 - L2 LINE L2 0 3272 3089 1800 151 35 56 chr17 60762907 60763226 -24675254 + AluJo SINE Alu 1 312 0 503 322 103 77 chr17 60763226 60763493 -24674987 - L2 LINE L2 -183 3089 2804 2231 121 7 0 chr17 60763845 60764150 -24674330 + AluSx SINE Alu 1 307 -5 426 336 15 8 chr17 60766622 60766756 -24671724 - MIR SINE MIR -85 177 43 2153 113 0 3 chr17 60766862 60767168 -24671312 - AluSx SINE Alu 0 305 1 810 131 0 0 chr17 60767190 60767297 -24671183 - FLAM_C SINE Alu -25 118 12 492 264 197 14 chr17 60767655 60767863 -24670617 + MIR SINE MIR 7 252 -10 931 150 46 6 chr17 60768109 60768282 -24670198 + L1MC1 LINE L1 6148 6327 -6 2257 117 0 7 chr17 60768482 60768789 -24669691 + AluSx SINE Alu 1 305 -7 274 83 0 0 chr17 60768972 60769008 -24669472 + U2 snRNA snRNA 1 36 -152 2491 76 0 10 chr17 60769374 60769678 -24668802 - AluSg SINE Alu -9 301 1 955 114 8 0 chr17 60769684 60769816 -24668664 - AluSq/x SINE Alu -180 133 1 1432 191 58 34 chr17 60770007 60770301 -24668179 - AluJb SINE Alu -11 301 1 281 91 0 18 chr17 60770329 60770384 -24668096 + (TTTTA)n Simple_repeat Simple_repeat 3 56 0 10603 25 0 151 chr17 60770385 60771945 -24666535 - SVA Other Other -6 1380 57 201 39 0 0 chr17 60771945 60771971 -24666509 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 2394 76 0 10 chr17 60772665 60772966 -24665514 + AluY SINE Alu 3 300 -11 881 230 45 55 chr17 60773106 60773415 -24665065 - L2 LINE L2 -4 3309 3004 2149 117 7 10 chr17 60773612 60773912 -24664568 + AluSx SINE Alu 1 299 -13 34 42 0 0 chr17 60777184 60777232 -24661248 + AT_rich Low_complexity Low_complexity 1 48 0 184 254 36 36 chr17 60779048 60779103 -24659377 - L2 LINE L2 -5 3267 3213 2303 92 0 0 chr17 60779268 60779594 -24658886 - AluSx SINE Alu 0 328 3 1709 196 28 0 chr17 60779754 60780045 -24658435 + AluJb SINE Alu 1 299 -13 202 182 0 0 chr17 60780333 60780366 -24658114 - MIR SINE MIR -112 150 118 1290 161 0 5 chr17 60780418 60780623 -24657857 - AluJb SINE Alu -16 296 93 206 264 0 28 chr17 60781355 60781427 -24657053 + MIR SINE MIR 191 260 -2 259 247 269 11 chr17 60781480 60781573 -24656907 - MIR SINE MIR -52 210 94 906 155 24 92 chr17 60781863 60782070 -24656410 - AluJo SINE Alu 0 312 120 279 0 0 0 chr17 60782293 60782324 -24656156 + (TA)n Simple_repeat Simple_repeat 2 32 0 2280 83 37 0 chr17 60782324 60782624 -24655856 - AluSp SINE Alu -1 312 2 323 295 93 26 chr17 60782700 60782893 -24655587 + MIR SINE MIR 13 218 -44 2158 115 17 0 chr17 60784229 60784524 -24653956 - AluSg SINE Alu -8 302 3 353 252 221 77 chr17 60784574 60784661 -24653819 + MIR SINE MIR 9 82 -180 1665 145 78 28 chr17 60784661 60784943 -24653537 - AluJo SINE Alu -16 296 1 353 252 221 77 chr17 60784943 60784995 -24653485 + MIR SINE MIR 82 125 -137 2125 133 3 7 chr17 60784995 60785289 -24653191 + AluJo SINE Alu 1 293 -19 353 252 221 77 chr17 60785289 60785370 -24653110 + MIR SINE MIR 125 262 0 556 123 0 0 chr17 60785432 60785505 -24652975 + AluSx SINE Alu 1 73 -240 1006 104 0 0 chr17 60785507 60785632 -24652848 - AluJo/FLAM SINE Alu -187 125 1 1829 104 0 15 chr17 60785652 60785911 -24652569 + AluSx SINE Alu 58 312 0 1543 93 40 0 chr17 60785993 60786218 -24652262 - L1PA14 LINE L1 0 6161 5928 268 143 442 0 chr17 60786305 60786382 -24652098 - L2 LINE L2 -3 3310 3200 920 169 32 0 chr17 60786638 60786792 -24651688 - FRAM SINE Alu -7 159 1 180 111 0 0 chr17 60787555 60787582 -24650898 + (T)n Simple_repeat Simple_repeat 1 27 0 2377 149 64 82 chr17 60787638 60787694 -24650786 - L1ME1 LINE L1 0 6166 6110 1582 161 58 15 chr17 60787694 60787968 -24650512 + AluJo SINE Alu 5 290 -22 2377 149 64 82 chr17 60787968 60788507 -24649973 - L1ME1 LINE L1 -56 6110 5582 2142 143 3 0 chr17 60788508 60788816 -24649664 + AluSx SINE Alu 1 309 -3 2310 115 0 0 chr17 60788895 60789191 -24649289 + AluSg SINE Alu 1 296 -14 1371 94 0 2 chr17 60789192 60789437 -24649043 + AluSp SINE Alu 2 296 -17 1844 191 0 3 chr17 60789533 60789836 -24648644 - AluJb SINE Alu -10 302 1 500 247 13 40 chr17 60790505 60790567 -24647913 - MIR SINE MIR 0 262 200 1978 140 3 36 chr17 60790567 60790874 -24647606 - AluSx SINE Alu -15 297 1 500 247 13 40 chr17 60790874 60790961 -24647519 - MIR SINE MIR -62 200 117 1080 168 0 17 chr17 60790973 60791146 -24647334 - FRAM SINE Alu -6 170 1 418 357 50 50 chr17 60791310 60791333 -24647147 - L2 LINE L2 0 3272 3250 2409 106 0 0 chr17 60791333 60791644 -24646836 + AluSq SINE Alu 1 311 -2 418 357 50 50 chr17 60791644 60791900 -24646580 - L2 LINE L2 -21 3251 2993 186 43 0 0 chr17 60791916 60791939 -24646541 + (TG)n Simple_repeat Simple_repeat 2 24 0 243 351 68 14 chr17 60792049 60792197 -24646283 - L2 LINE L2 -427 2887 2732 194 353 44 64 chr17 60792226 60792430 -24646050 - L2 LINE L2 -571 2743 2544 566 226 128 24 chr17 60792502 60792666 -24645814 + MIR SINE MIR 63 243 -19 1240 270 145 40 chr17 60792929 60793417 -24645063 + L2 LINE L2 2383 2818 -495 3890 96 2 4 chr17 60793417 60793929 -24644551 + MER9 LTR ERVK 1 511 0 1240 270 145 40 chr17 60793929 60794106 -24644374 + L2 LINE L2 2818 2975 -338 1860 182 0 3 chr17 60794106 60794414 -24644066 - AluJb SINE Alu -5 307 1 1240 270 145 40 chr17 60794414 60794563 -24643917 + L2 LINE L2 2975 3295 -18 2409 88 3 16 chr17 60794566 60794883 -24643597 - AluSp SINE Alu 0 313 1 2434 84 3 3 chr17 60795230 60795540 -24642940 + AluSx SINE Alu 1 310 -2 535 289 13 13 chr17 60795734 60795886 -24642594 - MIR SINE MIR -88 174 23 2223 118 0 0 chr17 60796122 60796410 -24642070 + AluSc SINE Alu 1 288 -21 1943 155 3 0 chr17 60796628 60796918 -24641562 - AluJb SINE Alu -21 291 1 675 256 112 40 chr17 60797018 60797295 -24641185 + L2 LINE L2 3010 3306 -7 1997 158 0 10 chr17 60797374 60797678 -24640802 + AluJb SINE Alu 1 301 -11 2320 119 0 0 chr17 60798328 60798638 -24639842 - AluSx SINE Alu -2 310 1 550 325 35 13 chr17 60798955 60799186 -24639294 - MIR SINE MIR -14 248 13 21 0 0 0 chr17 60799330 60799351 -24639129 + AT_rich Low_complexity Low_complexity 1 21 0 2262 96 3 23 chr17 60799403 60799705 -24638775 - AluSx SINE Alu -16 296 1 364 326 98 5 chr17 60800849 60801042 -24637438 - MIR SINE MIR -21 241 31 2542 60 0 0 chr17 60803703 60804001 -24634479 + AluY SINE Alu 1 298 -13 308 305 47 47 chr17 60805514 60805593 -24632887 - L2 LINE L2 0 3272 3191 2022 138 3 3 chr17 60805593 60805904 -24632576 + AluSq SINE Alu 1 311 -2 308 305 47 47 chr17 60805904 60805952 -24632528 - L2 LINE L2 -80 3192 3145 243 210 16 0 chr17 60805974 60806036 -24632444 - MLT1K LTR MaLR -22 566 504 230 98 24 0 chr17 60806080 60806121 -24632359 - MLT1K LTR MaLR -168 420 379 315 0 0 0 chr17 60806708 60806743 -24631737 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 1866 112 30 0 chr17 60806743 60807010 -24631470 - AluSx SINE Alu -29 283 9 2219 100 0 3 chr17 60807358 60807667 -24630813 - AluSg SINE Alu -2 308 1 677 266 25 0 chr17 60808347 60808505 -24629975 + FRAM SINE Alu 2 163 -3 882 339 89 45 chr17 60808634 60809114 -24629366 - L2 LINE L2 -366 2948 2490 1440 184 0 41 chr17 60809114 60809437 -24629043 + AluJb SINE Alu 1 311 0 882 339 89 45 chr17 60809437 60809913 -24628567 - L2 LINE L2 -824 2490 1949 33 0 0 0 chr17 60810144 60810177 -24628303 + AT_rich Low_complexity Low_complexity 1 33 0 1861 105 51 0 chr17 60810177 60810453 -24628027 - AluSg SINE Alu -20 290 1 378 186 20 10 chr17 60810721 60810823 -24627657 + CT-rich Low_complexity Low_complexity 3 105 0 474 104 75 0 chr17 60810835 60810902 -24627578 - AluSx SINE Alu -45 267 196 995 95 0 7 chr17 60810902 60811039 -24627441 - AluSx SINE Alu -176 136 1 252 86 0 0 chr17 60811392 60811427 -24627053 + (A)n Simple_repeat Simple_repeat 1 35 0 352 167 48 0 chr17 60811622 60811706 -24626774 + CT-rich Low_complexity Low_complexity 4 91 0 246 208 0 0 chr17 60811720 60811773 -24626707 + CT-rich Low_complexity Low_complexity 4 56 0 535 227 160 13 chr17 60812104 60812254 -24626226 + MER5A DNA MER1_type 12 183 -6 2837 133 20 28 chr17 60812528 60812745 -24625735 - L1MB3 LINE L1 0 6183 5966 2344 76 0 3 chr17 60812745 60813048 -24625432 - AluY SINE Alu -9 302 1 2837 133 20 28 chr17 60813048 60813334 -24625146 - L1MB3 LINE L1 -217 5966 5684 234 116 0 0 chr17 60813448 60813491 -24624989 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 186 43 0 0 chr17 60813490 60813513 -24624967 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 786 123 0 18 chr17 60813513 60813627 -24624853 - AluJb SINE Alu -187 125 14 1293 181 59 28 chr17 60814127 60814414 -24624066 - AluJo SINE Alu -16 296 1 2062 138 0 0 chr17 60815367 60815671 -24622809 - AluSx SINE Alu -8 304 1 226 146 83 0 chr17 60816033 60816081 -24622399 - MER5A DNA MER1_type -77 112 61 232 115 0 39 chr17 60816084 60816136 -24622344 + (TTTC)n Simple_repeat Simple_repeat 1 50 0 958 213 0 5 chr17 60816142 60816330 -24622150 - AluJo SINE Alu -2 310 124 748 151 0 24 chr17 60816977 60817103 -24621377 - FLAM_C SINE Alu -7 136 14 1566 159 36 39 chr17 60817220 60817528 -24620952 + AluJo SINE Alu 1 307 -5 339 239 0 0 chr17 60817540 60817607 -24620873 + MIR3 SINE MIR 110 176 -32 680 297 31 35 chr17 60818520 60818779 -24619701 - Charlie8 DNA MER1_type -2141 276 19 1667 151 0 47 chr17 60819088 60819427 -24619053 + AluJo SINE Alu 1 325 0 1256 125 227 12 chr17 60819427 60819683 -24618797 + AluYa5 SINE Alu 1 311 0 28 29 0 0 chr17 60819683 60819718 -24618762 + AT_rich Low_complexity Low_complexity 1 35 0 1957 150 0 0 chr17 60819751 60820058 -24618422 - AluSx SINE Alu -5 307 1 1033 197 21 5 chr17 60820058 60820246 -24618234 - MER58A DNA MER1_type -31 193 3 1875 130 13 3 chr17 60820391 60820691 -24617789 - AluJb SINE Alu -9 303 1 1054 138 0 0 chr17 60820776 60820936 -24617544 + AluJb SINE Alu 147 306 -6 1852 141 13 16 chr17 60820938 60821251 -24617229 + AluSx SINE Alu 1 312 0 330 26 0 0 chr17 60821374 60821413 -24617067 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1985 107 0 4 chr17 60821415 60821696 -24616784 - AluY SINE Alu -30 281 2 542 307 49 45 chr17 60821736 60822000 -24616480 + MLT1J LTR MaLR 237 501 -10 23 0 0 53 chr17 60822359 60822378 -24616102 + AT_rich Low_complexity Low_complexity 1 19 -17 1963 140 3 0 chr17 60822378 60822686 -24615794 + AluJb SINE Alu 1 309 -3 23 0 0 53 chr17 60822686 60822704 -24615776 + AT_rich Low_complexity Low_complexity 19 36 0 2095 118 0 0 chr17 60822726 60823023 -24615457 - AluSx SINE Alu -15 297 1 1716 253 140 57 chr17 60823106 60823396 -24615084 + L1MC4 LINE L1 6961 7226 -816 2117 100 0 27 chr17 60823396 60823697 -24614783 + AluSx SINE Alu 1 293 -19 1716 253 140 57 chr17 60823697 60824272 -24614208 + L1MC4 LINE L1 7226 7922 -120 2124 80 21 3 chr17 60824272 60824560 -24613920 + AluSg SINE Alu 1 293 -17 1716 253 140 57 chr17 60824560 60824692 -24613788 + L1MC4 LINE L1 7922 8042 0 446 250 24 92 chr17 60824795 60824959 -24613521 - L2 LINE L2 -3 3310 3158 719 175 0 0 chr17 60825266 60825380 -24613100 + MER81 DNA DNA 1 114 0 297 323 0 30 chr17 60825380 60825468 -24613012 + MIR SINE MIR 65 151 -111 1788 143 21 75 chr17 60825483 60825560 -24612920 + L1MB7 LINE L1 5833 5913 -271 2164 107 0 10 chr17 60825560 60825870 -24612610 - AluSx SINE Alu -5 307 1 1788 143 21 75 chr17 60825870 60826164 -24612316 + L1MB7 LINE L1 5913 6184 0 3089 130 20 55 chr17 60826171 60826188 -24612292 + L1MB8 LINE L1 5602 5618 -560 1993 174 57 41 chr17 60826188 60826607 -24611873 + MSTB LTR MaLR 1 426 0 3089 130 20 55 chr17 60826607 60826711 -24611769 + L1MB8 LINE L1 5618 5724 -454 1497 171 16 66 chr17 60826711 60826872 -24611608 - AluJo SINE Alu -23 289 148 2171 114 0 0 chr17 60826872 60827171 -24611309 - AluSx SINE Alu -13 299 1 1497 171 16 66 chr17 60827171 60827313 -24611167 - AluJo SINE Alu -164 148 1 3089 130 20 55 chr17 60827313 60827788 -24610692 + L1MB8 LINE L1 5724 6178 0 22 56 0 0 chr17 60827795 60827831 -24610649 + AT_rich Low_complexity Low_complexity 1 36 0 260 377 0 0 chr17 60827885 60827962 -24610518 + L2 LINE L2 3104 3180 -92 1011 149 0 0 chr17 60827980 60828134 -24610346 + FRAM SINE Alu 1 152 -24 827 164 0 14 chr17 60828162 60828302 -24610178 + FLAM_C SINE Alu 2 139 -4 728 214 22 60 chr17 60828326 60828508 -24609972 + MER45A DNA AcHobo 4 178 0 230 328 16 0 chr17 60828511 60828572 -24609908 + L2 LINE L2 3235 3296 -17 237 279 38 0 chr17 60828618 60828697 -24609783 - L2 LINE L2 -9 3263 3182 2440 74 0 0 chr17 60829013 60829322 -24609158 - AluSq SINE Alu -4 309 1 287 183 0 0 chr17 60829364 60829424 -24609056 - Alu SINE Alu 0 302 243 1657 178 7 3 chr17 60829479 60829777 -24608703 - AluJo SINE Alu -11 301 3 2153 117 7 0 chr17 60829790 60830098 -24608382 - AluSx SINE Alu -2 310 1 2377 65 0 10 chr17 60830228 60830538 -24607942 - AluY SINE Alu -4 307 1 671 204 8 0 chr17 60830538 60830670 -24607810 - FLAM_A SINE Alu 0 133 1 359 279 97 32 chr17 60830680 60830834 -24607646 + MIR SINE MIR 74 237 -25 2380 86 0 3 chr17 60830859 60831173 -24607307 + AluSq SINE Alu 1 313 0 231 295 0 16 chr17 60831571 60831632 -24606848 + MIR SINE MIR 18 77 -185 1781 175 28 23 chr17 60831681 60832035 -24606445 - MLT1A1 LTR MaLR 0 365 10 1819 156 0 10 chr17 60832351 60832665 -24605815 + AluJb SINE Alu 1 311 -1 2281 107 0 0 chr17 60833635 60833944 -24604536 + AluSx SINE Alu 1 309 -3 572 245 139 98 chr17 60833945 60834112 -24604368 - L2 LINE L2 -84 3229 3070 233 69 0 0 chr17 60834112 60834141 -24604339 + Alu SINE Alu 12 40 -268 572 245 139 98 chr17 60834141 60834312 -24604168 - L2 LINE L2 -243 3070 2848 404 215 42 42 chr17 60834357 60834501 -24603979 + MER69 DNA AcHobo 1481 1624 -902 2054 113 0 0 chr17 60834523 60834835 -24603645 + AluSg SINE Alu 1 312 0 2081 195 70 62 chr17 60834844 60835386 -24603094 + MER69 DNA AcHobo 1585 2121 -405 2248 70 3 3 chr17 60835386 60835707 -24602773 + AluSp SINE Alu 1 321 0 2081 195 70 62 chr17 60835707 60835785 -24602695 + MER69 DNA AcHobo 2121 2197 -329 1582 129 0 25 chr17 60835785 60836026 -24602454 + AluJo SINE Alu 1 235 -77 2081 195 70 62 chr17 60836026 60836132 -24602348 + MER69 DNA AcHobo 2197 2319 -207 793 150 0 16 chr17 60836143 60836270 -24602210 + FLAM_C SINE Alu 2 126 -17 543 152 23 184 chr17 60836308 60836418 -24602062 + MER69 DNA AcHobo 2311 2437 -89 1777 178 0 3 chr17 60836418 60836727 -24601753 - AluJo SINE Alu -4 308 1 543 152 23 184 chr17 60836727 60836765 -24601715 + MER69 DNA AcHobo 2437 2479 -47 2214 105 3 13 chr17 60836765 60837080 -24601400 + AluSx SINE Alu 1 312 0 543 152 23 184 chr17 60837080 60837186 -24601294 + MER69 DNA AcHobo 2479 2525 -1 452 241 18 27 chr17 60837219 60837331 -24601149 - L2 LINE L2 -528 2786 2676 1878 138 7 0 chr17 60837846 60838224 -24600256 - AluSx SINE Alu 0 380 1 1682 161 0 45 chr17 60838515 60838825 -24599655 + AluJb SINE Alu 1 296 -16 1636 171 38 0 chr17 60839472 60839764 -24598716 + AluJb SINE Alu 1 303 -9 2107 106 0 35 chr17 60839764 60840074 -24598406 + AluSq SINE Alu 1 300 -13 2114 127 0 0 chr17 60840161 60840469 -24598011 + AluSg SINE Alu 1 308 -2 1414 113 0 0 chr17 60840473 60840668 -24597812 + AluSg/x SINE Alu 104 298 -14 2190 88 16 0 chr17 60840747 60841053 -24597427 + AluSp SINE Alu 1 311 -2 853 143 93 0 chr17 60841266 60841406 -24597074 - FRAM SINE Alu -24 152 1 186 200 111 0 chr17 60841406 60841451 -24597029 - MIR SINE MIR -18 244 195 1421 179 47 30 chr17 60841451 60841752 -24596728 + AluJb SINE Alu 1 306 -6 362 301 10 0 chr17 60841769 60841872 -24596608 - MIR SINE MIR -50 212 109 1995 87 50 0 chr17 60842277 60842554 -24595926 - AluSq SINE Alu -17 296 6 944 166 57 0 chr17 60842868 60843043 -24595437 + MLT1C LTR MaLR 2 186 -281 890 149 0 0 chr17 60843043 60843184 -24595296 + AluJb SINE Alu 1 141 -171 1748 140 3 78 chr17 60843226 60843502 -24594978 + MLT1C LTR MaLR 171 421 -46 2160 92 3 3 chr17 60843502 60843795 -24594685 - AluSg SINE Alu -17 293 1 1748 140 3 78 chr17 60843795 60843839 -24594641 + MLT1C LTR MaLR 421 467 0 248 346 222 0 chr17 60844488 60844650 -24593830 - MIR SINE MIR -17 245 48 426 264 138 25 chr17 60844650 60844809 -24593671 + LTR33 LTR ERVL 2 178 -343 2260 101 0 0 chr17 60845113 60845411 -24593069 - AluSx SINE Alu -14 298 1 485 244 113 92 chr17 60845661 60845836 -24592644 - MER77 LTR ERV1 -4 601 522 2224 71 0 0 chr17 60845836 60846139 -24592341 - AluY SINE Alu 0 303 1 485 244 113 92 chr17 60846139 60846264 -24592216 - MER77 LTR ERV1 -83 522 401 1481 147 30 0 chr17 60846299 60846530 -24591950 - Tigger5 DNA MER2_type 0 2323 2086 376 148 16 0 chr17 60846552 60846613 -24591867 - Tigger5 DNA MER2_type -2261 62 1 * 936 244 132 15 chr17 60846613 60846878 -24591602 - MER77 LTR ERV1 -256 349 54 2246 82 3 3 chr17 60847178 60847472 -24591008 + AluSp SINE Alu 1 294 -19 1825 165 26 34 chr17 60847538 60847889 -24590591 - Tigger7 DNA MER2_type -385 348 1 618 254 60 40 chr17 60848131 60848332 -24590148 - MIR SINE MIR -56 206 2 1792 161 10 7 chr17 60848733 60849038 -24589442 - AluJb SINE Alu -2 310 5 2341 43 0 0 chr17 60849052 60849377 -24589103 - AluY SINE Alu 0 325 1 684 265 79 101 chr17 60849380 60849401 -24589079 - HAL1 LINE L1 0 2507 2487 2262 151 3 0 chr17 60849401 60849746 -24588734 + MER7A DNA MER2_type 3 346 0 684 265 79 101 chr17 60849746 60849801 -24588679 - HAL1 LINE L1 -20 2487 2432 2224 80 0 3 chr17 60849801 60850100 -24588380 + AluY SINE Alu 1 298 -13 684 265 79 101 chr17 60850100 60850727 -24587753 - HAL1 LINE L1 -75 2432 1818 314 196 0 134 chr17 60850944 60851019 -24587461 + L1MC5 LINE L1 7097 7158 -803 2147 111 0 0 chr17 60851019 60851317 -24587163 - AluSx SINE Alu -14 298 1 314 196 0 134 chr17 60851317 60851338 -24587142 + L1MC5 LINE L1 7158 7180 -781 1944 117 21 3 chr17 60851338 60851628 -24586852 - AluJb SINE Alu -17 295 1 1675 129 15 117 chr17 60851641 60851967 -24586513 - AluJb SINE Alu -9 293 1 1148 209 87 45 chr17 60851969 60852058 -24586422 + L1MC5 LINE L1 7508 7592 -369 2382 79 0 0 chr17 60852058 60852363 -24586117 + AluY SINE Alu 1 305 -6 1148 209 87 45 chr17 60852363 60852674 -24585806 + L1MC5 LINE L1 7592 7925 -36 1384 226 30 108 chr17 60852767 60853278 -24585202 + MLT1H1 LTR MaLR 1 460 -95 1620 172 7 14 chr17 60853278 60853574 -24584906 + AluJb SINE Alu 1 294 -18 1384 226 30 108 chr17 60853574 60853663 -24584817 + MLT1H1 LTR MaLR 460 554 -1 711 205 0 0 chr17 60853831 60853958 -24584522 - FLAM_C SINE Alu -10 133 7 220 200 0 67 chr17 60854081 60854141 -24584339 - L2 LINE L2 0 3272 3217 959 180 0 0 chr17 60854902 60855052 -24583428 + FRAM SINE Alu 2 151 -15 1950 116 14 7 chr17 60855097 60855390 -24583090 + AluSx SINE Alu 5 299 -13 2133 98 3 10 chr17 60855406 60855711 -24582769 + AluSc SINE Alu 1 303 -6 332 287 0 32 chr17 60855767 60855861 -24582619 + L2 LINE L2 2225 2315 -999 297 273 68 45 chr17 60856149 60856281 -24582199 + L1ME4a LINE L1 5460 5594 -527 566 62 0 12 chr17 60856291 60856371 -24582109 + (TTCC)n Simple_repeat Simple_repeat 2 80 0 735 243 100 31 chr17 60856372 60856693 -24581787 + L1ME4a LINE L1 5608 5950 -171 1545 87 198 32 chr17 60856694 60856947 -24581533 - AluSx SINE Alu -17 295 1 1676 175 0 38 chr17 60856965 60857257 -24581223 - AluJo SINE Alu -30 282 2 1621 182 10 36 chr17 60857273 60857575 -24580905 - AluJb SINE Alu -18 294 1 1467 176 92 4 chr17 60857652 60857925 -24580555 + AluJo SINE Alu 1 297 -15 2298 115 0 3 chr17 60858146 60858459 -24580021 - AluSx SINE Alu 0 312 1 482 231 196 40 chr17 60858490 60858715 -24579765 - MIR SINE MIR 0 262 3 277 222 8 3 chr17 60858797 60858866 -24579614 - MIR SINE MIR -98 110 40 1593 154 0 30 chr17 60859333 60859599 -24578881 + AluJb SINE Alu 45 302 -10 1513 110 0 5 chr17 60859634 60859843 -24578637 + AluSq SINE Alu 86 293 -20 26 0 0 0 chr17 60860268 60860294 -24578186 + AT_rich Low_complexity Low_complexity 1 26 0 2437 82 0 19 chr17 60860464 60860779 -24577701 + AluSc SINE Alu 1 309 0 222 37 0 0 chr17 60861085 60861112 -24577368 + (T)n Simple_repeat Simple_repeat 1 27 0 33 25 0 0 chr17 60861329 60861369 -24577111 + AT_rich Low_complexity Low_complexity 1 40 0 2265 135 0 0 chr17 60861507 60861819 -24576661 + AluSx SINE Alu 1 312 0 2355 93 0 3 chr17 60862298 60862600 -24575880 + AluSq SINE Alu 1 301 -12 21 36 0 0 chr17 60863749 60863777 -24574703 + AT_rich Low_complexity Low_complexity 1 28 0 937 273 113 44 chr17 60865532 60865964 -24572516 - MLT1K LTR MaLR -24 564 103 2202 98 0 14 chr17 60866035 60866358 -24572122 + AluSx SINE Alu 1 312 0 1833 142 0 0 chr17 60866370 60866630 -24571850 - AluJb SINE Alu -52 260 1 2229 100 3 29 chr17 60867490 60867799 -24570681 - AluSg SINE Alu -9 301 1 1823 165 11 0 chr17 60868301 60868580 -24569900 + AluJo SINE Alu 1 282 -30 555 285 153 24 chr17 60868782 60869276 -24569204 - L2 LINE L2 -1 3312 2757 2247 104 3 25 chr17 60869688 60870006 -24568474 + AluSx SINE Alu 1 311 -1 2973 13 0 0 chr17 60870389 60870707 -24567773 + AluYb8 SINE Alu 1 318 0 1253 302 73 18 chr17 60871373 60871988 -24566492 + L2 LINE L2 2246 2894 -420 595 207 53 68 chr17 60872078 60872344 -24566136 + L2 LINE L2 2921 3182 -131 2180 118 0 0 chr17 60872527 60872849 -24565631 - AluSx SINE Alu 0 322 1 1037 277 65 47 chr17 60872877 60873307 -24565173 - LTR33 LTR ERVL -38 483 46 2178 132 3 0 chr17 60873996 60874307 -24564173 - AluSx SINE Alu 0 312 1 876 144 8 0 chr17 60874319 60874451 -24564029 - AluJb SINE Alu -179 133 1 2164 116 7 0 chr17 60875036 60875329 -24563151 + AluSx SINE Alu 1 295 -17 7696 67 18 13 chr17 60876314 60878032 -24560448 + SVA Other Other 27 1385 -1 217 118 59 0 chr17 60879117 60879126 -24559354 + (TA)n Simple_repeat Simple_repeat 2 9 -46 1844 165 0 14 chr17 60879126 60879417 -24559063 + AluJb SINE Alu 4 290 -22 217 118 59 0 chr17 60879417 60879458 -24559022 + (TA)n Simple_repeat Simple_repeat 9 55 0 251 234 73 13 chr17 60879674 60879840 -24558640 - MIR SINE MIR -15 247 105 778 324 25 63 chr17 60879885 60880062 -24558418 - LTR16B LTR ERVL 0 464 282 2276 112 3 0 chr17 60880062 60880357 -24558123 + AluSp SINE Alu 1 296 -17 778 324 25 63 chr17 60880357 60880624 -24557856 - LTR16B LTR ERVL -182 282 37 2494 68 0 13 chr17 60881298 60881628 -24556852 - AluSx SINE Alu 0 312 1 3994 285 45 33 chr17 60881673 60883192 -24555288 - HERV16 LTR ERVL -3424 1572 35 443 316 47 14 chr17 60883202 60883468 -24555012 - LTR16B LTR ERVL -23 427 108 610 275 47 34 chr17 60883649 60883885 -24554595 + MIR SINE MIR 15 253 -9 196 260 96 39 chr17 60883990 60884094 -24554386 - MIR SINE MIR -36 226 117 1013 285 31 53 chr17 60884486 60884651 -24553829 + MLT1K LTR MaLR 96 263 -325 1793 158 32 3 chr17 60884651 60884935 -24553545 - AluJb SINE Alu -20 292 1 1013 285 31 53 chr17 60884935 60885179 -24553301 + MLT1K LTR MaLR 263 497 -91 1967 181 112 2 chr17 60885179 60885626 -24552854 + LTR54B LTR ERV1 1 496 -2 1013 285 31 53 chr17 60885626 60885668 -24552812 + MLT1K LTR MaLR 497 538 -50 2220 110 13 0 chr17 60885676 60885976 -24552504 + AluSp SINE Alu 1 304 -9 1816 152 29 60 chr17 60885977 60886325 -24552155 + MER1B DNA MER1_type 1 337 0 1333 255 102 60 chr17 60886381 60886506 -24551974 - L2 LINE L2 -2 3311 3193 2174 109 0 47 chr17 60886506 60886827 -24551653 + AluSx SINE Alu 1 306 -6 1333 255 102 60 chr17 60886827 60887097 -24551383 - L2 LINE L2 -120 3193 2936 1711 209 0 0 chr17 60887097 60887403 -24551077 + AluJo SINE Alu 1 306 -6 1333 255 102 60 chr17 60887403 60887852 -24550628 - L2 LINE L2 -377 2936 2418 327 49 0 0 chr17 60887860 60887901 -24550579 + (TTTTC)n Simple_repeat Simple_repeat 5 45 0 2356 94 7 3 chr17 60887918 60888225 -24550255 - AluSx SINE Alu -4 308 1 460 191 191 8 chr17 60888239 60888370 -24550110 - L2 LINE L2 -976 2338 2184 846 199 0 0 chr17 60888377 60888536 -24549944 + FRAM SINE Alu 11 169 0 612 234 160 45 chr17 60888536 60888805 -24549675 - L2 LINE L2 -1110 2204 1905 527 285 17 17 chr17 60888809 60888988 -24549492 + L2 LINE L2 3127 3305 -8 2173 102 3 23 chr17 60888999 60889302 -24549178 + AluSx SINE Alu 1 297 -15 2276 84 17 7 chr17 60889330 60889626 -24548854 + AluSq SINE Alu 1 299 -14 183 234 0 47 chr17 60889750 60889814 -24548666 + MIR SINE MIR 94 154 -108 2153 123 10 0 chr17 60890180 60890481 -24547999 + AluSx SINE Alu 1 304 -8 2247 99 0 0 chr17 60890498 60890816 -24547664 - AluSx SINE Alu 0 318 1 1885 159 3 0 chr17 60891723 60892024 -24546456 - AluJb SINE Alu -10 302 1 366 294 29 22 chr17 60892172 60892308 -24546172 - MIR SINE MIR -12 250 114 1877 183 0 0 chr17 60892414 60892715 -24545765 + AluJb SINE Alu 2 302 -10 210 257 122 0 chr17 60892744 60892818 -24545662 - L2 LINE L2 -1 3312 3230 2262 102 0 29 chr17 60893010 60893325 -24545155 - AluSc SINE Alu -3 306 1 237 319 14 0 chr17 60893416 60893488 -24544992 - L2 LINE L2 -180 3092 3020 257 189 32 21 chr17 60893753 60893848 -24544632 + (TTATA)n Simple_repeat Simple_repeat 4 99 0 1888 127 65 0 chr17 60893856 60894132 -24544348 - AluJb SINE Alu -18 294 1 2362 94 0 0 chr17 60894495 60894793 -24543687 + AluSg SINE Alu 1 298 -12 191 305 137 8 chr17 60895022 60895153 -24543327 + L2 LINE L2 3160 3307 -6 2462 61 0 3 chr17 60895591 60895887 -24542593 + AluSg1 SINE Alu 1 295 -14 2353 113 3 0 chr17 60896743 60897054 -24541426 - AluSp SINE Alu -1 312 1 3870 150 21 10 chr17 60897166 60897845 -24540635 - L1MB3 LINE L1 0 6183 5498 1646 181 3 21 chr17 60897954 60898241 -24540239 - AluJo SINE Alu -30 282 1 483 240 17 39 chr17 60898834 60899013 -24539467 + MER90 LTR ERV1 119 293 -321 2337 82 7 3 chr17 60899051 60899342 -24539138 + AluSc SINE Alu 1 292 -17 21 0 0 0 chr17 60899723 60899744 -24538736 + AT_rich Low_complexity Low_complexity 1 21 0 2347 114 0 0 chr17 60900409 60900716 -24537764 + AluSx SINE Alu 1 307 -5 683 239 0 0 chr17 60900899 60901033 -24537447 - MER63A DNA MER1_type 0 210 77 849 149 0 0 chr17 60901053 60901174 -24537306 + FLAM_C SINE Alu 2 122 -11 347 175 79 0 chr17 60901181 60901244 -24537236 - MER63A DNA MER1_type 0 81 14 2248 132 0 0 chr17 60901388 60901698 -24536782 - AluSx SINE Alu -2 310 1 2053 130 13 10 chr17 60901780 60902079 -24536401 + AluSx SINE Alu 3 302 -10 924 283 135 45 chr17 60902223 60902948 -24535532 + HAL1 LINE L1 738 1527 -980 707 218 97 57 chr17 60903436 60903684 -24534796 - MLT1K LTR MaLR -28 560 303 2069 141 0 7 chr17 60904470 60904769 -24533711 - AluJb SINE Alu -15 297 1 2253 99 0 0 chr17 60905358 60905702 -24532778 - AluSx SINE Alu 0 362 19 1311 151 9 5 chr17 60905727 60905939 -24532541 - AluJb SINE Alu -14 298 86 1939 137 28 0 chr17 60906358 60906643 -24531837 - AluSx SINE Alu -19 293 1 381 196 168 132 chr17 60906759 60907039 -24531441 + MLT1K LTR MaLR 299 588 0 2041 139 7 0 chr17 60907068 60907363 -24531117 + AluSx SINE Alu 1 297 -15 247 281 80 107 chr17 60908126 60908350 -24530130 + L2 LINE L2 2913 3130 -183 30 0 0 0 chr17 60908834 60908864 -24529616 + AT_rich Low_complexity Low_complexity 1 30 0 2314 73 6 16 chr17 60908878 60909192 -24529288 - AluY SINE Alu 0 311 1 1888 129 40 0 chr17 60909194 60909466 -24529014 - AluSq SINE Alu -30 283 1 327 288 16 40 chr17 60909577 60909702 -24528778 + L2 LINE L2 3192 3313 0 2246 96 0 3 chr17 60910039 60910331 -24528149 + AluSp SINE Alu 1 291 -22 2139 145 3 0 chr17 60910399 60910710 -24527770 - AluSx SINE Alu 0 312 1 1887 143 0 29 chr17 60911086 60911393 -24527087 + AluJb SINE Alu 1 298 -14 218 217 14 0 chr17 60911413 60911482 -24526998 + (TA)n Simple_repeat Simple_repeat 1 70 0 494 162 100 53 chr17 60911754 60911883 -24526597 - LTR23 LTR ERV1 0 445 331 2262 76 3 28 chr17 60911883 60912219 -24526261 - AluSp SINE Alu 0 313 1 494 162 100 53 chr17 60912219 60912295 -24526185 - LTR23 LTR ERV1 -114 331 260 633 125 0 0 chr17 60912296 60912392 -24526088 - AluSg/x SINE Alu 0 312 217 1264 146 31 83 chr17 60912392 60912680 -24525800 - LTR56 LTR ERV1 -172 273 1 2342 104 0 0 chr17 60912704 60913013 -24525467 - AluSq SINE Alu -4 309 1 1371 148 0 13 chr17 60913105 60913334 -24525146 + AluJb SINE Alu 87 312 0 704 265 97 65 chr17 60913781 60913919 -24524561 - L1ME4a LINE L1 0 6121 5989 945 193 72 0 chr17 60913919 60914085 -24524395 + MER45A DNA AcHobo 1 178 0 704 265 97 65 chr17 60914085 60914222 -24524258 - L1ME4a LINE L1 -132 5989 5858 1221 76 0 0 chr17 60914222 60914366 -24524114 - U4 snRNA snRNA -1 144 1 704 265 97 65 chr17 60914366 60914833 -24523647 - L1ME4a LINE L1 -263 5858 5354 582 344 25 49 chr17 60914881 60915166 -24523314 + L2 LINE L2 2814 3091 -181 1007 81 0 38 chr17 60915182 60915367 -24523113 + (TTC)n Simple_repeat Simple_repeat 3 180 0 486 172 0 25 chr17 60915368 60915490 -24522990 + CT-rich Low_complexity Low_complexity 3 121 0 1632 141 22 4 chr17 60915498 60915768 -24522712 - L1MD3 LINE L1 -14 7981 7707 194 244 42 193 chr17 60915812 60915931 -24522549 + L2 LINE L2 3142 3242 -30 186 71 0 0 chr17 60916255 60916283 -24522197 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 2106 115 7 0 chr17 60916284 60916572 -24521908 - AluSq SINE Alu -23 290 1 1840 125 12 0 chr17 60916599 60916855 -24521625 + AluSx SINE Alu 1 259 -53 492 273 73 54 chr17 60916985 60917107 -24521373 + L2 LINE L2 2574 2703 -611 2658 51 0 0 chr17 60917107 60917418 -24521062 - AluY SINE Alu 0 311 1 492 273 73 54 chr17 60917418 60917500 -24520980 + L2 LINE L2 2703 2782 -532 1798 152 17 14 chr17 60917549 60917845 -24520635 - AluJo SINE Alu -10 302 6 311 306 33 58 chr17 60917889 60918010 -24520470 + L2 LINE L2 3154 3271 -1 711 263 9 24 chr17 60919011 60919224 -24519256 + L2 LINE L2 3104 3313 0 1729 117 95 4 chr17 60919543 60919817 -24518663 + AluSg SINE Alu 1 299 -11 570 262 153 32 chr17 60920579 60920717 -24517763 - L2 LINE L2 0 3313 3193 2312 102 0 0 chr17 60920717 60921011 -24517469 + AluSx SINE Alu 1 294 -18 570 262 153 32 chr17 60921011 60921154 -24517326 - L2 LINE L2 -120 3193 2998 759 116 26 116 chr17 60921404 60921497 -24516983 - FLAM_C SINE Alu -170 142 67 1470 87 5 73 chr17 60921497 60921716 -24516764 + AluY SINE Alu 91 294 -17 759 116 26 116 chr17 60921716 60921777 -24516703 - FLAM_C SINE Alu -245 67 2 782 137 0 86 chr17 60921872 60922011 -24516469 - FLAM_A SINE Alu -6 127 1 2144 117 4 0 chr17 60922124 60922405 -24516075 - AluSp SINE Alu -31 282 1 21 0 0 0 chr17 60922406 60922427 -24516053 + AT_rich Low_complexity Low_complexity 1 21 0 200 236 149 93 chr17 60922432 60922541 -24515939 + MIR SINE MIR 90 213 -49 1994 115 14 0 chr17 60922541 60922850 -24515630 + AluJb SINE Alu 3 315 0 200 236 149 93 chr17 60922850 60922900 -24515580 + MIR SINE MIR 213 259 -3 255 190 33 130 chr17 60923040 60923092 -24515388 - L1MA10 LINE L1 0 6334 6283 846 239 69 0 chr17 60923092 60923280 -24515200 - L1ME1 LINE L1 -12 6154 5954 2165 59 0 4 chr17 60923328 60923598 -24514882 - AluY SINE Alu -12 299 31 25 0 0 0 chr17 60923879 60923904 -24514576 + AT_rich Low_complexity Low_complexity 1 25 0 286 118 53 92 chr17 60923951 60924027 -24514453 - L1ME3A LINE L1 -5 6165 6093 1791 163 14 14 chr17 60924934 60925246 -24513234 + AluJo SINE Alu 1 312 0 728 274 92 98 chr17 60925443 60925800 -24512680 - MER34 LTR ERV1 -2 540 186 2146 110 17 0 chr17 60925800 60926099 -24512381 - AluSx SINE Alu -8 304 1 728 274 92 98 chr17 60926099 60926284 -24512196 - MER34 LTR ERV1 -356 186 1 21 0 0 0 chr17 60926992 60927013 -24511467 + AT_rich Low_complexity Low_complexity 1 21 0 2347 103 3 0 chr17 60927013 60927325 -24511155 - AluSq SINE Alu 0 313 1 1593 179 13 36 chr17 60927345 60927653 -24510827 - AluJo SINE Alu -11 301 1 530 67 13 0 chr17 60927766 60927841 -24510639 + (TC)n Simple_repeat Simple_repeat 1 76 0 2368 34 0 4 chr17 60927914 60928182 -24510298 - AluY SINE Alu -16 295 29 250 252 163 34 chr17 60928234 60928381 -24510099 - L1MEd LINE L1 -4704 1427 1262 246 116 0 0 chr17 60928404 60928447 -24510033 - Alu SINE Alu 0 308 266 1363 116 0 22 chr17 60928447 60928671 -24509809 + AluY SINE Alu 83 301 -10 281 248 0 88 chr17 60928745 60928858 -24509622 - L1MEd LINE L1 -4930 1189 1087 417 326 23 8 chr17 60929422 60929554 -24508926 + MIR SINE MIR 17 150 -58 2160 123 0 7 chr17 60929680 60929980 -24508500 + AluSx SINE Alu 1 298 -14 2424 70 0 10 chr17 60930130 60930428 -24508052 + AluY SINE Alu 1 295 -16 357 109 0 0 chr17 60930490 60930545 -24507935 + (TG)n Simple_repeat Simple_repeat 2 56 0 293 228 0 59 chr17 60930552 60930653 -24507827 + L1ME1 LINE L1 4957 5051 -1095 1307 164 20 117 chr17 60930654 60930802 -24507678 + AluJo SINE Alu 1 99 -213 1302 28 0 0 chr17 60930802 60930944 -24507536 + L1PA5 LINE L1 6004 6145 -9 1307 164 20 117 chr17 60930944 60931136 -24507344 + AluJo SINE Alu 99 308 -4 1360 187 37 48 chr17 60931145 60931549 -24506931 + L1ME1 LINE L1 5042 5442 -724 2156 191 51 39 chr17 60931549 60931805 -24506675 - MER50 LTR ERV1 0 734 467 2080 114 0 0 chr17 60931805 60932113 -24506367 - AluSc SINE Alu 0 308 1 2156 191 51 39 chr17 60932113 60932347 -24506133 - MER50 LTR ERV1 -267 467 237 471 202 131 0 chr17 60932666 60932765 -24505715 - MER50 LTR ERV1 -613 121 10 3066 218 16 18 chr17 60932771 60933444 -24505036 + L1ME1 LINE L1 5439 6110 -56 2541 33 33 10 chr17 60933512 60933815 -24504665 + AluY SINE Alu 2 311 0 2105 80 59 3 chr17 60933871 60934158 -24504322 + AluSc SINE Alu 1 303 -6 1813 135 7 17 chr17 60934634 60934923 -24503557 - AluSx SINE Alu -18 294 9 3232 80 110 0 chr17 60934957 60935395 -24503085 + LTR19A LTR ERV1 1 486 0 2061 134 0 0 chr17 60935491 60935812 -24502668 + AluSx SINE Alu 1 321 0 305 275 130 7 chr17 60936121 60936259 -24502221 + L2 LINE L2 2929 3083 -189 2468 91 0 0 chr17 60936376 60936684 -24501796 + AluSx SINE Alu 1 308 -4 2066 119 7 7 chr17 60936996 60937299 -24501181 - AluSx SINE Alu -9 303 1 1924 145 0 43 chr17 60937701 60938025 -24500455 - AluJb SINE Alu -2 310 1 1973 128 0 4 chr17 60939143 60939424 -24499056 - AluSx SINE Alu -15 297 18 2041 146 77 70 chr17 60939998 60940068 -24498412 - Tigger2a DNA MER2_type -2274 434 366 2080 130 7 7 chr17 60940068 60940368 -24498112 - AluSx SINE Alu -12 300 1 2041 146 77 70 chr17 60940368 60940728 -24497752 - Tigger2a DNA MER2_type -2342 366 1 2083 123 0 30 chr17 60941135 60941436 -24497044 - AluSx SINE Alu -20 292 1 206 261 149 67 chr17 60941853 60941987 -24496493 - L2 LINE L2 -10 3303 3159 193 205 25 0 chr17 60942058 60942103 -24496377 + MIR SINE MIR 62 108 -100 1244 143 50 57 chr17 60944106 60944511 -24493969 + LTR54 LTR ERV1 2 409 -101 2351 73 0 20 chr17 60944511 60944812 -24493668 + AluY SINE Alu 1 295 -16 2209 103 17 0 chr17 60944819 60945121 -24493359 + AluSg SINE Alu 1 307 -3 1244 143 50 57 chr17 60945121 60945146 -24493334 + LTR54 LTR ERV1 415 510 0 358 171 216 36 chr17 60945254 60945297 -24493183 - MER104 DNA Tc2 -1731 167 133 1751 166 58 15 chr17 60945297 60945622 -24492858 - MER44D DNA MER2_type 0 609 1 358 171 216 36 chr17 60945622 60945689 -24492791 - MER104 DNA Tc2 -1765 133 37 246 95 0 0 chr17 60945704 60945746 -24492734 + (TA)n Simple_repeat Simple_repeat 2 43 0 697 175 0 117 chr17 60945746 60945883 -24492597 - FLAM_A SINE Alu -12 121 1 2156 113 3 0 chr17 60945913 60946236 -24492244 + AluSx SINE Alu 1 324 0 23 0 0 0 chr17 60946372 60946395 -24492085 + AT_rich Low_complexity Low_complexity 1 23 0 1282 102 0 0 chr17 60946398 60946565 -24491915 + AluSg/x SINE Alu 129 295 -17 285 51 0 0 chr17 60946565 60946604 -24491876 + (TA)n Simple_repeat Simple_repeat 1 39 0 1995 118 7 0 chr17 60946630 60946910 -24491570 + AluSp SINE Alu 1 282 -31 444 74 96 7 chr17 60946912 60947177 -24491303 + (TA)n Simple_repeat Simple_repeat 1 288 0 31 26 0 0 chr17 60947193 60947231 -24491249 + AT_rich Low_complexity Low_complexity 1 38 0 1028 150 12 0 chr17 60947550 60947717 -24490763 - AluJb SINE Alu -11 301 133 1492 134 49 67 chr17 60947954 60948042 -24490438 - L1MB4 LINE L1 -2 6178 6090 2406 81 3 0 chr17 60948042 60948340 -24490140 + AluSp SINE Alu 1 299 -14 1492 134 49 67 chr17 60948340 60948460 -24490020 - L1MB4 LINE L1 -90 6090 5969 1817 116 72 4 chr17 60948460 60948736 -24489744 - AluSg SINE Alu -15 295 1 1492 134 49 67 chr17 60948736 60948870 -24489610 - L1MB4 LINE L1 -211 5969 5841 1849 171 0 0 chr17 60949253 60949545 -24488935 - AluSx SINE Alu -20 292 1 29 0 0 0 chr17 60950107 60950136 -24488344 + AT_rich Low_complexity Low_complexity 1 29 0 1677 156 39 14 chr17 60950207 60950489 -24487991 - AluJo SINE Alu -23 289 1 21 0 0 0 chr17 60952145 60952166 -24486314 + AT_rich Low_complexity Low_complexity 1 21 0 379 242 61 38 chr17 60952378 60952510 -24485970 - L1ME3A LINE L1 -5 6165 6031 1986 128 0 45 chr17 60952758 60953070 -24485410 - AluSq SINE Alu -15 298 1 2364 80 0 0 chr17 60953734 60954035 -24484445 - AluY SINE Alu -10 301 1 990 182 24 18 chr17 60954448 60954618 -24483862 - FAM SINE Alu -4 171 1 1115 201 31 9 chr17 60955419 60955643 -24482837 - L1MB5 LINE L1 -1 6173 5945 1476 187 9 111 chr17 60955689 60956269 -24482211 - L1MB5 LINE L1 -226 5948 5444 2450 96 0 0 chr17 60956896 60957208 -24481272 - AluSx SINE Alu 0 312 1 1494 189 25 11 chr17 60957378 60957663 -24480817 + AluJb SINE Alu 1 289 -23 1963 161 0 0 chr17 60957666 60957971 -24480509 + AluSx SINE Alu 1 305 -7 2144 86 53 13 chr17 60958359 60958660 -24479820 + AluSq SINE Alu 1 313 0 206 356 0 0 chr17 60958936 60958995 -24479485 + L3 LINE CR1 194 252 -1325 460 316 48 19 chr17 60959446 60959655 -24478825 + L3 LINE CR1 71 285 -1292 1093 142 0 0 chr17 60959743 60959898 -24478582 - AluSg/x SINE Alu -24 288 134 675 325 145 61 chr17 60959988 60960465 -24478015 + L3 LINE CR1 425 860 -717 2465 65 0 0 chr17 60960465 60960757 -24477723 + AluY SINE Alu 1 292 -19 675 325 145 61 chr17 60960757 60961090 -24477390 + L3 LINE CR1 860 1313 -264 995 192 131 0 chr17 60961090 60961288 -24477192 + MER58A DNA MER1_type 1 224 0 675 325 145 61 chr17 60961288 60961332 -24477148 + L3 LINE CR1 1313 1352 -225 835 197 0 0 chr17 60961372 60961504 -24476976 - FLAM_C SINE Alu -1 132 1 23 0 0 0 chr17 60961507 60961530 -24476950 + AT_rich Low_complexity Low_complexity 1 23 0 528 256 25 44 chr17 60961739 60961942 -24476538 + L1MC4 LINE L1 7748 7946 -96 2297 105 0 0 chr17 60961984 60962280 -24476200 + AluSx SINE Alu 1 296 -16 2202 100 3 3 chr17 60962307 60962598 -24475882 + AluSx SINE Alu 1 291 -21 2394 84 0 13 chr17 60963247 60963556 -24474924 + AluY SINE Alu 1 305 -6 233 351 85 0 chr17 60963595 60963689 -24474791 - L2 LINE L2 -6 3307 3206 1762 153 3 32 chr17 60963744 60964058 -24474422 + AluJb SINE Alu 7 311 -1 1945 138 7 3 chr17 60964088 60964379 -24474101 - AluSq SINE Alu -11 302 11 1688 121 0 0 chr17 60964398 60964622 -24473858 - AluSx SINE Alu -88 224 1 833 153 15 8 chr17 60964964 60965095 -24473385 + AluSq/x SINE Alu 2 133 -180 1062 156 107 0 chr17 60965112 60965317 -24473163 - L1MC2 LINE L1 -7 6337 6111 1315 88 6 0 chr17 60965323 60965494 -24472986 - AluSx SINE Alu -140 172 1 989 212 56 40 chr17 60965497 60966078 -24472402 - L1M4 LINE L1 -841 5305 4611 2459 82 0 0 chr17 60966078 60966383 -24472097 - AluY SINE Alu -6 305 1 989 212 56 40 chr17 60966383 60966505 -24471975 - L1M4 LINE L1 -1535 4611 4493 2065 110 38 0 chr17 60966581 60966872 -24471608 - AluSq SINE Alu -11 302 1 560 42 0 0 chr17 60967727 60967799 -24470681 - AluY SINE Alu -6 305 234 379 287 73 40 chr17 60968846 60968996 -24469484 - MIR3 SINE MIR -31 177 23 2210 117 13 0 chr17 60969024 60969331 -24469149 - AluSx SINE Alu -1 311 1 661 175 92 8 chr17 60969332 60969452 -24469028 - AluJo SINE Alu -178 134 5 1552 161 3 53 chr17 60969589 60969911 -24468569 + AluSx SINE Alu 2 307 -5 303 28 0 0 chr17 60970161 60970197 -24468283 + (TA)n Simple_repeat Simple_repeat 2 37 0 1976 138 0 24 chr17 60971824 60972120 -24466360 - AluSx SINE Alu -23 289 1 857 152 0 8 chr17 60972184 60972316 -24466164 - AluJo SINE Alu -176 136 6 1102 154 45 45 chr17 60972321 60972461 -24466019 - MER3 DNA MER1_type -85 2539 2397 2140 92 3 57 chr17 60972461 60972776 -24465704 - AluSc SINE Alu -11 298 1 1102 154 45 45 chr17 60972776 60972881 -24465599 - MER3 DNA MER1_type -226 2398 2294 775 178 7 22 chr17 60972885 60973020 -24465460 + AluJo SINE Alu 2 134 -178 271 197 33 16 chr17 60973031 60973092 -24465388 - MER3 DNA MER1_type 0 2303 2242 225 110 0 290 chr17 60973104 60973204 -24465276 + MER3 DNA MER1_type 139 209 0 247 222 211 11 chr17 60973212 60973302 -24465178 + MIR SINE MIR 105 212 -50 572 172 0 0 chr17 60973600 60973693 -24464787 + AluJb SINE Alu 203 295 -17 644 167 0 0 chr17 60973971 60974061 -24464419 + FRAM SINE Alu 57 146 -30 361 130 0 0 chr17 60974062 60974116 -24464364 + Alu SINE Alu 245 298 -4 300 263 195 0 chr17 60974118 60974236 -24464244 - MIR SINE MIR -9 253 113 1886 137 38 53 chr17 60974252 60974594 -24463886 - MER1B DNA MER1_type 0 337 1 1771 144 56 0 chr17 60975450 60975735 -24462745 + AluJb SINE Alu 1 301 -11 1217 87 48 14 chr17 60976161 60976368 -24462112 - AluSc SINE Alu -13 296 83 2062 124 10 3 chr17 60976673 60976971 -24461509 - AluSx SINE Alu -7 305 6 652 96 48 0 chr17 60977151 60977255 -24461225 - Tigger2 DNA MER2_type -2412 306 198 3484 84 25 2 chr17 60977256 60977731 -24460749 + LTR15 LTR ERV1 1 486 -7 1205 125 31 10 chr17 60977742 60977879 -24460601 - Tigger2 DNA MER2_type -2522 196 52 2361 101 7 0 chr17 60977879 60978186 -24460294 + AluSp SINE Alu 1 309 -4 1205 125 31 10 chr17 60978186 60978240 -24460240 - Tigger2 DNA MER2_type -2666 52 1 2328 90 3 0 chr17 60978514 60978803 -24459677 + AluSx SINE Alu 5 294 -18 967 190 169 30 chr17 60978824 60979119 -24459361 + MER2 DNA MER2_type 1 336 -9 692 200 107 0 chr17 60979153 60979303 -24459177 + MER58B DNA MER1_type 147 312 -29 273 243 0 27 chr17 60979436 60979510 -24458970 + L1ME LINE L1 5507 5578 -584 234 258 42 67 chr17 60979535 60979655 -24458825 - L1ME LINE L1 -349 5821 5705 238 355 0 0 chr17 60979913 60979989 -24458491 - L1ME LINE L1 -2170 5638 5563 1403 180 22 33 chr17 60979997 60980269 -24458211 + AluJb SINE Alu 1 269 -43 23 0 0 0 chr17 60980275 60980298 -24458182 + AT_rich Low_complexity Low_complexity 1 23 0 2017 96 43 7 chr17 60980613 60980895 -24457585 + AluSp SINE Alu 1 292 -21 213 327 65 19 chr17 60980957 60981064 -24457416 + L2 LINE L2 294 405 -2909 1767 215 140 12 chr17 60981368 60981941 -24456539 + L1MC4 LINE L1 7098 7743 -299 2257 80 3 3 chr17 60982124 60982411 -24456069 + AluY SINE Alu 1 287 -24 918 212 6 111 chr17 60982562 60982805 -24455675 - L1MC4 LINE L1 -51 7991 7789 1859 172 0 7 chr17 60982805 60983102 -24455378 - AluJb SINE Alu -17 295 1 918 212 6 111 chr17 60983102 60983183 -24455297 - L1MC4 LINE L1 -253 7789 7701 379 255 0 10 chr17 60983177 60983275 -24455205 - L1MC4 LINE L1 -1593 6449 6353 * 3049 200 44 48 chr17 60983269 60983511 -24454969 - L1ME2 LINE L1 -7 6157 5916 2052 135 0 16 chr17 60983511 60983814 -24454666 - AluSx SINE Alu -14 298 1 3049 200 44 48 chr17 60983814 60984410 -24454070 - L1ME2 LINE L1 -248 5916 5322 2172 100 7 27 chr17 60984413 60984712 -24453768 - AluSx SINE Alu -19 293 1 405 208 10 0 chr17 60984745 60984841 -24453639 - L1M4 LINE L1 -5126 1729 1633 1059 216 52 68 chr17 60985025 60985367 -24453113 - L1M4 LINE L1 -5643 1216 642 1734 160 0 11 chr17 60986589 60986870 -24451610 - AluJb SINE Alu -29 283 6 487 269 76 29 chr17 60986960 60987131 -24451349 - MIR SINE MIR -18 244 66 184 299 39 13 chr17 60988165 60988242 -24450238 + L2 LINE L2 2418 2496 -818 1943 104 4 15 chr17 60988368 60988636 -24449844 - AluSq SINE Alu -48 265 1 1665 141 62 11 chr17 60991852 60992128 -24446352 - AluJb SINE Alu -18 294 5 764 182 188 0 chr17 60993212 60993382 -24445098 + MER3 DNA MER1_type 7 208 -1 248 266 16 0 chr17 60993330 60993394 -24445086 - MER3 DNA MER1_type -108 101 37 * 2171 121 0 0 chr17 60994284 60994581 -24443899 - AluSx SINE Alu -15 297 1 26 0 0 0 chr17 60994931 60994957 -24443523 + AT_rich Low_complexity Low_complexity 1 26 0 1751 139 85 28 chr17 60995105 60995422 -24443058 + MER44D DNA MER2_type 3 607 -2 427 93 0 0 chr17 60996425 60996479 -24442001 - AluSc SINE Alu -20 289 236 2243 96 3 0 chr17 60996677 60996968 -24441512 - AluSx SINE Alu -20 292 1 2143 118 0 3 chr17 60997308 60997604 -24440876 + AluSq SINE Alu 1 295 -18 189 0 0 0 chr17 60998138 60998159 -24440321 + (TA)n Simple_repeat Simple_repeat 2 22 0 360 83 0 0 chr17 60998260 60998308 -24440172 - Alu SINE Alu -255 48 1 1882 148 10 3 chr17 60998500 60998791 -24439689 - AluJb SINE Alu -19 293 1 3976 153 39 6 chr17 60998896 60999545 -24438935 - L1MB5 LINE L1 -1 6173 5504 204 358 49 0 chr17 60999813 60999894 -24438586 + L2 LINE L2 3227 3311 -2 1590 197 14 3 chr17 61000178 61000473 -24438007 + AluJb SINE Alu 1 298 -14 2506 57 0 0 chr17 61000574 61000871 -24437609 + AluY SINE Alu 1 297 -14 898 117 0 0 chr17 61001019 61001147 -24437333 + AluSg/x SINE Alu 170 297 -13 2367 96 0 7 chr17 61001696 61001997 -24436483 + AluSx SINE Alu 1 299 -13 1663 183 0 7 chr17 61002408 61002698 -24435782 - AluJo SINE Alu -24 288 1 737 56 11 0 chr17 61004419 61004509 -24433971 + AluSq SINE Alu 2 92 -221 1099 46 0 0 chr17 61004509 61004639 -24433841 + AluSp/q SINE Alu 168 297 -16 726 117 0 0 chr17 61004936 61005039 -24433441 - AluSg/x SINE Alu -2 307 205 581 137 10 59 chr17 61005040 61005142 -24433338 - AluJ/FLAM SINE Alu -213 99 3 254 211 70 14 chr17 61005179 61005250 -24433230 - L1MC5 LINE L1 -185 7776 7702 1297 90 9 90 chr17 61005251 61005463 -24433017 - AluSq SINE Alu -10 303 109 1318 197 47 25 chr17 61006172 61006492 -24431988 + L1ME3A LINE L1 5844 6170 0 1798 164 0 43 chr17 61006626 61006717 -24431763 - AluJb SINE Alu -20 292 199 2264 58 24 3 chr17 61006717 61007011 -24431469 + AluY SINE Alu 1 300 -11 1798 164 0 43 chr17 61007011 61007224 -24431256 - AluJb SINE Alu -113 199 1 231 258 43 21 chr17 61007333 61007426 -24431054 + L1ME4a LINE L1 5939 6033 -88 530 188 111 21 chr17 61008732 61008744 -24429736 - L1MA10 LINE L1 -4 6330 6319 573 208 35 109 chr17 61008744 61008886 -24429594 - L1ME1 LINE L1 -5 6161 6010 2307 106 0 0 chr17 61008886 61009178 -24429302 - AluSx SINE Alu -17 295 4 573 208 35 109 chr17 61009178 61009270 -24429210 - L1ME1 LINE L1 -156 6010 5972 812 188 102 35 chr17 61009270 61009467 -24429013 + MER6B DNA MER2_type 1 210 0 573 208 35 109 chr17 61009467 61009590 -24428890 - L1ME1 LINE L1 -194 5972 5841 563 156 11 191 chr17 61009585 61009623 -24428857 - L1MB4 LINE L1 -4 6176 6133 * 1646 160 17 21 chr17 61009623 61009911 -24428569 + AluJo SINE Alu 3 289 -23 563 156 11 191 chr17 61009911 61010085 -24428395 - L1MB4 LINE L1 -47 6133 6025 1732 164 3 20 chr17 61010085 61010384 -24428096 + AluJo SINE Alu 7 300 -12 563 156 11 191 chr17 61010384 61010452 -24428028 - L1MB4 LINE L1 -155 6025 5946 * 3316 234 93 28 chr17 61010433 61011497 -24426983 - L1MEc LINE L1 -5230 1166 34 2579 221 81 20 chr17 61012188 61013344 -24425136 + L1MC4 LINE L1 6516 7900 -142 207 397 46 46 chr17 61013415 61013546 -24424934 - L2 LINE L2 -31 3241 3111 1311 151 0 23 chr17 61014820 61015038 -24423442 + AluJo SINE Alu 83 295 -17 1191 125 16 0 chr17 61015094 61015278 -24423202 - AluSp SINE Alu -2 311 125 2641 49 0 0 chr17 61015522 61015829 -24422651 + AluY SINE Alu 1 307 -4 239 0 0 31 chr17 61016935 61016967 -24421513 + (TA)n Simple_repeat Simple_repeat 1 31 0 590 292 67 11 chr17 61017199 61017377 -24421103 + L2 LINE L2 3080 3267 -5 444 222 102 0 chr17 61017702 61017810 -24420670 - MER44D DNA MER2_type -220 389 1 246 95 0 0 chr17 61017892 61017934 -24420546 + (TA)n Simple_repeat Simple_repeat 2 43 0 645 175 0 117 chr17 61017934 61018071 -24420409 - FLAM_A SINE Alu -12 121 1 2142 113 3 0 chr17 61018101 61018424 -24420056 + AluSx SINE Alu 1 324 0 23 0 0 0 chr17 61018560 61018583 -24419897 + AT_rich Low_complexity Low_complexity 1 23 0 1278 102 0 0 chr17 61018586 61018753 -24419727 + AluSg/x SINE Alu 127 293 -17 285 51 0 0 chr17 61018753 61018792 -24419688 + (TA)n Simple_repeat Simple_repeat 2 40 0 2008 127 7 10 chr17 61018818 61019125 -24419355 + AluSx SINE Alu 1 306 -6 885 158 0 0 chr17 61019352 61019485 -24418995 - FLAM_C SINE Alu -10 133 1 216 0 0 0 chr17 61019497 61019521 -24418959 + (T)n Simple_repeat Simple_repeat 1 24 0 324 0 0 0 chr17 61020632 61020668 -24417812 + (TG)n Simple_repeat Simple_repeat 2 37 0 191 404 98 8 chr17 61020957 61021202 -24417278 + L2 LINE L2 2709 2975 -339 2275 103 6 6 chr17 61022038 61022349 -24416131 - AluSq SINE Alu -2 311 1 198 258 0 0 chr17 61025297 61025359 -24413121 + CT-rich Low_complexity Low_complexity 3 64 0 1838 130 4 4 chr17 61026184 61026454 -24412026 - AluJb SINE Alu -4 308 39 261 196 0 0 chr17 61026534 61026580 -24411900 - MER5B DNA MER1_type -1 177 132 344 232 45 27 chr17 61026600 61026712 -24411768 - LTR67 LTR ERVL -16 541 428 1030 74 0 7 chr17 61027980 61028115 -24410365 - AluSg/x SINE Alu -8 304 171 1699 189 102 68 chr17 61028124 61028714 -24409766 - L1MC3 LINE L1 -1 7784 5624 9984 118 59 31 chr17 61028971 61030652 -24407828 - Tigger1 DNA MER2_type 0 2418 692 2392 53 0 0 chr17 61030652 61030985 -24407495 - AluY SINE Alu 0 333 1 417 141 0 0 chr17 61030986 61031057 -24407423 + (TCTCCC)n Simple_repeat Simple_repeat 4 74 0 1260 189 10 73 chr17 61031062 61031271 -24407209 - AluJo SINE Alu -30 282 96 2235 105 7 0 chr17 61031271 61031565 -24406915 - AluSx SINE Alu -16 296 1 1260 189 10 73 chr17 61031565 61031656 -24406824 - AluJo SINE Alu -216 96 1 2123 116 7 7 chr17 61031667 61031970 -24406510 - AluSx SINE Alu -9 303 1 1946 126 10 10 chr17 61031980 61032273 -24406207 - AluSx SINE Alu -19 293 1 3419 138 100 8 chr17 61032472 61033093 -24405387 - Tigger1 DNA MER2_type -1740 678 1 22 25 0 25 chr17 61034147 61034159 -24404321 + AT_rich Low_complexity Low_complexity 1 12 -27 2216 118 3 0 chr17 61034159 61034464 -24404016 - AluY SINE Alu -5 306 1 22 25 0 25 chr17 61034464 61034491 -24403989 + AT_rich Low_complexity Low_complexity 12 39 0 2257 120 0 3 chr17 61034977 61035286 -24403194 + AluSx SINE Alu 1 308 -4 27 49 0 0 chr17 61035359 61035400 -24403080 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr17 61035543 61035567 -24402913 + AT_rich Low_complexity Low_complexity 1 24 0 2105 120 0 20 chr17 61035573 61035872 -24402608 + AluSx SINE Alu 1 293 -19 878 98 0 0 chr17 61035884 61035996 -24402484 - FLAM_C SINE Alu -31 112 1 190 274 158 21 chr17 61036717 61036812 -24401668 - L2 LINE L2 0 3313 3206 23 0 0 0 chr17 61037071 61037094 -24401386 + AT_rich Low_complexity Low_complexity 1 23 0 2123 93 19 35 chr17 61037094 61037406 -24401074 - AluSg SINE Alu -3 307 1 199 274 0 20 chr17 61037416 61037467 -24401013 - L2 LINE L2 -27 3245 3196 2334 98 0 0 chr17 61039479 61039775 -24398705 + AluSx SINE Alu 2 297 -15 666 184 0 0 chr17 61040450 61040559 -24397921 + FLAM_C SINE Alu 1 109 -34 1878 162 6 13 chr17 61041922 61042236 -24396244 + AluJb SINE Alu 1 312 0 1470 178 19 4 chr17 61042635 61042899 -24395581 + AluJo SINE Alu 39 306 -6 2229 87 3 7 chr17 61043211 61043529 -24394951 + AluSq SINE Alu 1 317 0 192 77 0 0 chr17 61044414 61044440 -24394040 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1309 146 78 0 chr17 61044914 61045133 -24393347 + MER46A DNA MER2_type 1 236 0 1039 146 55 55 chr17 61045234 61045453 -24393027 - MER20 DNA MER1_type 0 219 1 986 186 34 15 chr17 61045626 61045830 -24392650 - MER3 DNA MER1_type -1 208 1 1593 172 52 21 chr17 61045926 61046217 -24392263 + AluJo SINE Alu 5 304 -8 1858 92 11 11 chr17 61047932 61048216 -24390264 - L1PA13 LINE L1 0 6163 5880 227 250 33 0 chr17 61048608 61048668 -24389812 + MIR SINE MIR 77 138 -124 1006 266 197 23 chr17 61049288 61049720 -24388760 + L2 LINE L2 2807 3313 0 991 179 6 0 chr17 61051549 61051711 -24386769 - FRAM SINE Alu -13 163 1 855 164 66 0 chr17 61053708 61053860 -24384620 + AluJb SINE Alu 137 298 -14 820 189 56 0 chr17 61054333 61054476 -24384004 + FAM SINE Alu 1 151 -34 2149 257 150 51 chr17 61055111 61055482 -24382998 - L1MC4 LINE L1 -124 7918 7585 1302 146 38 4 chr17 61055482 61055722 -24382758 - L1MB5 LINE L1 -12 6162 5915 2149 257 150 51 chr17 61055722 61056367 -24382113 - L1MC4 LINE L1 -457 7585 6774 1599 144 14 18 chr17 61056367 61056644 -24381836 + AluJo SINE Alu 1 276 -36 2149 257 150 51 chr17 61056644 61056774 -24381706 - L1MC4 LINE L1 -1268 6774 6658 270 252 43 0 chr17 61057307 61057422 -24381058 + (TA)n Simple_repeat Simple_repeat 2 121 0 2391 90 3 0 chr17 61057433 61057745 -24380735 + AluSq SINE Alu 1 313 0 21 0 0 0 chr17 61057745 61057766 -24380714 + AT_rich Low_complexity Low_complexity 1 21 0 312 266 3 1 chr17 61058469 61058558 -24379922 + MER34 LTR ERV1 1 79 -463 1998 112 21 0 chr17 61058659 61058944 -24379536 + AluSq SINE Alu 1 291 -22 2069 97 83 0 chr17 61059265 61059554 -24378926 + AluSq SINE Alu 1 313 0 2102 90 10 17 chr17 61064001 61064300 -24374180 + AluY SINE Alu 2 298 -13 24 77 0 0 chr17 61065522 61065574 -24372906 + AT_rich Low_complexity Low_complexity 1 52 0 533 260 130 7 chr17 61069224 61069378 -24369102 - MIR3 SINE MIR 0 208 36 2094 103 0 3 chr17 61070819 61071101 -24367379 + AluSg SINE Alu 1 281 -29 276 30 0 0 chr17 61071109 61071142 -24367338 + (TA)n Simple_repeat Simple_repeat 1 33 0 2181 106 7 0 chr17 61071513 61071796 -24366684 + AluSc SINE Alu 1 285 -24 2024 118 3 10 chr17 61072118 61072414 -24366066 - AluSg SINE Alu -16 294 1 1923 149 0 0 chr17 61072561 61072837 -24365643 + AluSx SINE Alu 1 276 -36 180 0 0 0 chr17 61072837 61072857 -24365623 + (T)n Simple_repeat Simple_repeat 1 20 0 1869 138 10 43 chr17 61074931 61075235 -24363245 + AluSx SINE Alu 3 296 -16 801 166 191 0 chr17 61075243 61075442 -24363038 - Charlie1a DNA MER1_type -1165 290 54 397 188 55 70 chr17 61078059 61078166 -24360314 + MER20B DNA MER1_type 199 303 -480 3702 136 38 38 chr17 61078166 61078911 -24359569 - Tigger5 DNA MER2_type 0 2323 1579 * 4229 166 14 17 chr17 61078907 61079712 -24358768 - Tigger5 DNA MER2_type -1495 828 27 484 282 77 0 chr17 61079773 61079943 -24358537 + MER20B DNA MER1_type 394 576 -207 266 271 29 14 chr17 61079975 61080045 -24358435 + MER91 DNA MER1_type 70 140 0 231 296 46 9 chr17 61080698 61080806 -24357674 - L2 LINE L2 -2178 1136 1025 394 215 0 13 chr17 61081109 61081188 -24357292 - L2 LINE L2 -45 3268 3191 2025 65 47 43 chr17 61081252 61081560 -24356920 - AluY SINE Alu 0 309 1 196 263 182 20 chr17 61081586 61081685 -24356795 - MIR SINE MIR -46 216 102 270 261 153 36 chr17 61081692 61081803 -24356677 - L2 LINE L2 -12 3260 3137 1622 141 30 8 chr17 61081840 61082103 -24356377 - MER1A DNA MER1_type -221 308 40 242 350 70 0 chr17 61082188 61082288 -24356192 - MIR SINE MIR 0 262 156 1769 143 53 42 chr17 61082293 61082576 -24355904 + MER47A DNA MER2_type 6 295 -2028 1517 180 3 43 chr17 61082576 61082881 -24355599 - AluJo SINE Alu -19 293 1 1769 143 53 42 chr17 61082881 61082953 -24355527 + MER47A DNA MER2_type 295 365 -1 365 185 49 12 chr17 61082960 61083041 -24355439 - MIR SINE MIR -109 153 70 2238 110 0 3 chr17 61083063 61083362 -24355118 - AluSq SINE Alu -15 298 1 2178 113 3 0 chr17 61083371 61083664 -24354816 - AluSx SINE Alu -18 294 1 368 285 194 50 chr17 61083702 61084201 -24354279 - L2 LINE L2 -697 2617 2047 2208 101 7 0 chr17 61084347 61084643 -24353837 - AluSx SINE Alu -14 298 1 325 273 38 53 chr17 61084837 61084969 -24353511 - MIR SINE MIR -27 235 106 1414 144 0 48 chr17 61084972 61085222 -24353258 - AluJo SINE Alu -11 301 64 1199 212 28 4 chr17 61085231 61085481 -24352999 + AluJb SINE Alu 43 298 -14 757 96 15 89 chr17 61085911 61086046 -24352434 - FLAM_C SINE Alu -8 125 1 2441 75 3 0 chr17 61086221 61086529 -24351951 - AluSx SINE Alu -3 309 1 226 371 91 29 chr17 61088923 61089098 -24349382 + MIR SINE MIR 30 215 -47 2442 61 0 0 chr17 61089472 61089767 -24348713 + AluY SINE Alu 1 295 -16 300 305 108 72 chr17 61089793 61089960 -24348520 - MIR3 SINE MIR -21 187 15 2379 89 0 6 chr17 61090345 61090659 -24347821 + AluSx SINE Alu 1 312 0 560 255 137 25 chr17 61091492 61091696 -24346784 + MIR SINE MIR 12 238 -24 203 260 178 14 chr17 61092077 61092150 -24346330 - L2 LINE L2 0 3272 3188 1156 316 115 29 chr17 61092213 61092767 -24345713 - L2 LINE L2 -431 2883 2256 1573 38 0 0 chr17 61092767 61092974 -24345506 + L1PA5 LINE L1 5952 6158 0 1156 316 115 29 chr17 61092974 61093104 -24345376 - L2 LINE L2 -1058 2256 2139 842 128 0 0 chr17 61093122 61093239 -24345241 + FLAM_C SINE Alu 1 117 -16 23 33 0 0 chr17 61093240 61093270 -24345210 + AT_rich Low_complexity Low_complexity 1 30 0 2222 126 7 0 chr17 61093317 61093627 -24344853 + AluSx SINE Alu 1 312 0 2559 151 29 0 chr17 61093631 61094042 -24344438 - MSTC LTR MaLR -2 426 4 21 0 0 0 chr17 61094145 61094166 -24344314 + AT_rich Low_complexity Low_complexity 1 21 0 1479 169 13 66 chr17 61094237 61094538 -24343942 - AluJo SINE Alu -27 285 1 989 206 94 55 chr17 61094538 61094791 -24343689 - L1M4 LINE L1 -1316 4830 4589 1780 158 46 30 chr17 61094791 61095158 -24343322 - THE1C LTR MaLR -2 373 1 989 206 94 55 chr17 61095158 61095454 -24343026 - L1M4 LINE L1 -1557 4589 4259 21 0 0 0 chr17 61095529 61095550 -24342930 + AT_rich Low_complexity Low_complexity 1 21 0 230 324 78 28 chr17 61096081 61096260 -24342220 + MIR SINE MIR 9 196 -66 182 286 29 38 chr17 61096348 61096453 -24342027 - MIR3 SINE MIR -21 187 84 2264 81 30 0 chr17 61096529 61096826 -24341654 - AluY SINE Alu -5 306 1 1477 175 0 8 chr17 61096928 61097191 -24341289 - AluSx SINE Alu -3 309 49 518 179 0 0 chr17 61097199 61097277 -24341203 + AluJ/FLAM SINE Alu 6 83 -229 1125 197 5 0 chr17 61097378 61097571 -24340909 - AluJo SINE Alu -118 194 1 31 0 0 0 chr17 61098896 61098927 -24339553 + AT_rich Low_complexity Low_complexity 1 31 0 2241 82 14 0 chr17 61099245 61099549 -24338931 - AluSx SINE Alu 0 308 1 349 272 113 14 chr17 61099872 61100085 -24338395 + L1MA9 LINE L1 6041 6274 -38 1656 111 64 67 chr17 61100108 61100406 -24338074 + AluJo SINE Alu 1 297 -15 2291 105 0 6 chr17 61102215 61102529 -24335951 - AluSx SINE Alu 0 312 1 2015 143 10 16 chr17 61102842 61103156 -24335324 - AluJo SINE Alu 0 312 1 207 0 0 0 chr17 61103408 61103431 -24335049 + (A)n Simple_repeat Simple_repeat 1 23 0 2382 94 0 0 chr17 61103756 61104055 -24334425 + AluSq SINE Alu 1 299 -14 387 281 0 0 chr17 61104345 61104434 -24334046 - L2 LINE L2 0 3313 3225 2197 119 3 0 chr17 61104548 61104843 -24333637 + AluSx SINE Alu 1 296 -16 1778 116 0 34 chr17 61105101 61105368 -24333112 + AluSg SINE Alu 1 258 -52 234 81 0 0 chr17 61105430 61105467 -24333013 + AluSg SINE Alu 259 295 -4 21 0 0 0 chr17 61105467 61105488 -24332992 + AT_rich Low_complexity Low_complexity 1 21 0 667 245 47 43 chr17 61105706 61105939 -24332541 - MIR SINE MIR -1 261 28 1528 60 0 0 chr17 61106141 61106323 -24332157 - AluY SINE Alu -9 302 121 1614 172 119 25 chr17 61106451 61106489 -24331991 + L1MB8 LINE L1 5690 5723 -455 2316 88 14 0 chr17 61106489 61106784 -24331696 - AluSg SINE Alu -11 299 1 1614 172 119 25 chr17 61106784 61107192 -24331288 + L1MB8 LINE L1 5723 6178 0 216 0 0 0 chr17 61107278 61107302 -24331178 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 641 140 0 0 chr17 61107327 61107427 -24331053 - FLAM_C SINE Alu -40 103 4 228 296 0 0 chr17 61107625 61107679 -24330801 - L2 LINE L2 -4 3268 3215 411 295 32 32 chr17 61108029 61108185 -24330295 + MIR SINE MIR 48 203 -59 292 333 36 27 chr17 61108372 61108483 -24329997 - L2 LINE L2 -55 3217 3106 2223 107 0 7 chr17 61108553 61108861 -24329619 + AluY SINE Alu 1 306 -5 301 289 70 18 chr17 61108872 61108986 -24329494 + MIR SINE MIR 92 211 -51 2257 70 0 0 chr17 61109091 61109363 -24329117 - AluY SINE Alu -39 272 1 1534 171 6 93 chr17 61109368 61109702 -24328778 - AluJo SINE Alu -7 305 1 607 193 0 9 chr17 61110070 61110184 -24328296 + FRAM SINE Alu 32 144 -32 225 0 0 0 chr17 61110184 61110209 -24328271 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 228 106 106 21 chr17 61111495 61111542 -24326938 - L2 LINE L2 -12 3260 3210 2287 92 7 3 chr17 61111559 61111853 -24326627 + AluSq SINE Alu 1 295 -18 2362 92 0 0 chr17 61111931 61112226 -24326254 + AluSq SINE Alu 1 295 -18 575 186 51 42 chr17 61112465 61112583 -24325897 + FLAM_C SINE Alu 1 119 -24 324 0 0 0 chr17 61112583 61112619 -24325861 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 1513 159 60 92 chr17 61112658 61113061 -24325419 - MLT1B LTR MaLR 0 390 1 1562 153 0 12 chr17 61113426 61113675 -24324805 + AluSx SINE Alu 1 246 -66 445 179 26 0 chr17 61113677 61113755 -24324725 + AluSg/x SINE Alu 210 289 -21 376 252 122 7 chr17 61113926 61114065 -24324415 + MIR3 SINE MIR 47 201 -7 441 329 238 35 chr17 61114130 61114809 -24323671 - L2 LINE L2 -1081 2233 1377 2145 130 0 0 chr17 61114809 61115109 -24323371 + AluJb SINE Alu 13 312 0 441 329 238 35 chr17 61115109 61115201 -24323279 - L2 LINE L2 -1937 1377 1305 1740 176 32 0 chr17 61115266 61115544 -24322936 + AluSx SINE Alu 1 287 -25 2449 58 3 10 chr17 61115552 61115865 -24322615 + AluY SINE Alu 1 311 0 1171 109 13 0 chr17 61115868 61116050 -24322430 + AluSg/x SINE Alu 125 308 0 188 222 22 0 chr17 61116050 61116095 -24322385 + L2 LINE L2 3268 3313 0 203 351 61 40 chr17 61116109 61116257 -24322223 - L2 LINE L2 -2116 1198 1048 24 100 0 0 chr17 61117029 61117109 -24321371 + AT_rich Low_complexity Low_complexity 1 80 0 2487 84 0 0 chr17 61117150 61117461 -24321019 - AluSx SINE Alu -1 311 1 711 151 0 24 chr17 61117935 61118061 -24320419 + AluSg/x SINE Alu 179 301 -11 1065 259 12 4 chr17 61118092 61118343 -24320137 - MIR SINE MIR -2 260 8 301 125 42 0 chr17 61118580 61118628 -24319852 - Tigger7 DNA MER2_type -1 2486 2437 967 207 74 32 chr17 61118666 61118787 -24319693 - Tigger7 DNA MER2_type -479 226 91 1623 201 0 22 chr17 61118787 61119105 -24319375 + AluJo SINE Alu 1 311 -1 967 207 74 32 chr17 61119105 61119200 -24319280 - Tigger7 DNA MER2_type -614 91 1 2061 122 0 14 chr17 61119240 61119528 -24318952 - AluSx SINE Alu -7 305 22 2263 84 35 0 chr17 61120468 61120754 -24317726 + AluSx SINE Alu 1 296 -16 442 127 183 0 chr17 61120754 61120825 -24317655 + AluSg/x SINE Alu 132 215 -95 2022 103 0 0 chr17 61120836 61121098 -24317382 + AluSx SINE Alu 38 299 -13 2071 115 21 0 chr17 61121100 61121387 -24317093 + AluSg SINE Alu 3 295 -15 188 317 17 0 chr17 61121461 61121521 -24316959 - MIR SINE MIR -200 62 2 2012 115 4 11 chr17 61122111 61122389 -24316091 - AluSx SINE Alu -16 296 21 2479 69 0 0 chr17 61123780 61124083 -24314397 + AluY SINE Alu 1 303 -8 2487 77 0 6 chr17 61124131 61124443 -24314037 + AluY SINE Alu 1 310 -1 490 253 136 7 chr17 61124501 61124655 -24313825 + MER96 DNA MER1_type 1 174 -1 1794 152 14 4 chr17 61125265 61125542 -24312938 + AluJo SINE Alu 13 292 -20 686 226 14 88 chr17 61125954 61126251 -24312229 - L1MA9 LINE L1 -39 6273 5999 189 0 0 0 chr17 61126533 61126554 -24311926 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1483 184 27 58 chr17 61126563 61126894 -24311586 + AluJo SINE Alu 1 322 0 418 159 0 68 chr17 61126894 61126982 -24311498 - L1MC2 LINE L1 -17 6327 6246 1803 114 5 5 chr17 61126982 61127346 -24311134 + Charlie3 DNA MER1_type 18 2712 0 2611 150 28 21 chr17 61127352 61127884 -24310596 - L1MC2 LINE L1 -93 6251 5716 198 0 0 0 chr17 61127897 61127919 -24310561 + (TC)n Simple_repeat Simple_repeat 2 23 0 221 97 16 48 chr17 61127919 61127981 -24310499 + (TA)n Simple_repeat Simple_repeat 2 61 0 1361 217 27 50 chr17 61128030 61128468 -24310012 - L1M4 LINE L1 -1794 4421 3994 2328 92 0 7 chr17 61128516 61128822 -24309658 + AluSq SINE Alu 1 304 -9 255 154 0 51 chr17 61128832 61128848 -24309632 + GA-rich Low_complexity Low_complexity 3 18 -58 762 128 23 38 chr17 61128848 61128981 -24309499 + FLAM_C SINE Alu 3 133 0 255 154 0 51 chr17 61128981 61129042 -24309438 + GA-rich Low_complexity Low_complexity 18 76 0 299 200 0 0 chr17 61129472 61129527 -24308953 + MLT1I LTR MaLR 100 154 -255 288 182 0 0 chr17 61129526 61129581 -24308899 + MLT1I LTR MaLR 353 407 -2 * 307 287 0 0 chr17 61129584 61129671 -24308809 - MIR SINE MIR -6 256 170 2007 131 0 3 chr17 61130498 61130810 -24307670 - AluSx SINE Alu 0 312 2 504 0 0 0 chr17 61132628 61132684 -24305796 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 1541 153 99 11 chr17 61133249 61133531 -24304949 - AluJb SINE Alu -5 307 1 608 236 158 0 chr17 61133588 61133791 -24304689 - L1MEc LINE L1 -3379 2836 2602 1266 167 137 22 chr17 61133797 61134067 -24304413 + AluJo SINE Alu 2 302 -10 553 180 109 16 chr17 61134074 61134202 -24304278 + AluJ SINE Alu 1 140 -172 1688 174 31 7 chr17 61134202 61134496 -24303984 + AluJb SINE Alu 1 301 -11 1920 119 0 0 chr17 61134524 61134784 -24303696 + AluSx SINE Alu 44 303 -9 1007 252 96 12 chr17 61134784 61135248 -24303232 - L1MEc LINE L1 -3603 2612 2150 288 111 0 0 chr17 61135258 61135312 -24303168 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 990 191 18 0 chr17 61135367 61135535 -24302945 + AluJ SINE Alu 135 305 -7 351 267 18 42 chr17 61135535 61135700 -24302780 - L1MEc LINE L1 -4322 2074 1914 248 276 105 38 chr17 61135758 61135968 -24302512 - L1MEc LINE L1 -4765 1631 1408 2342 110 0 0 chr17 61135999 61136308 -24302172 - AluSc SINE Alu 0 309 1 209 163 0 0 chr17 61136314 61136337 -24302143 + T-rich Low_complexity Low_complexity 3 28 -17 1869 99 4 4 chr17 61136337 61136590 -24301890 - AluSg SINE Alu -57 253 1 209 163 0 0 chr17 61136590 61136609 -24301871 + T-rich Low_complexity Low_complexity 27 45 0 1159 256 48 109 chr17 61136671 61137578 -24300902 - L1MEc LINE L1 -5506 890 39 24 85 0 0 chr17 61137839 61137898 -24300582 + AT_rich Low_complexity Low_complexity 1 59 0 23 33 0 0 chr17 61138780 61138810 -24299670 + AT_rich Low_complexity Low_complexity 1 30 0 756 229 24 38 chr17 61139652 61139723 -24298757 + L1ME1 LINE L1 5955 6026 -140 1617 183 21 10 chr17 61139723 61140013 -24298467 - AluJo SINE Alu -19 293 1 756 229 24 38 chr17 61140013 61140151 -24298329 + L1ME1 LINE L1 6026 6161 -5 25 65 0 0 chr17 61140279 61140325 -24298155 + AT_rich Low_complexity Low_complexity 1 46 0 1735 121 116 129 chr17 61140795 61141235 -24297245 - Tigger2 DNA MER2_type 0 2718 1 29 70 0 0 chr17 61141302 61141359 -24297121 + AT_rich Low_complexity Low_complexity 1 57 0 27 29 0 0 chr17 61141384 61141418 -24297062 + AT_rich Low_complexity Low_complexity 1 34 0 670 125 0 0 chr17 61141456 61141578 -24296902 - AluJb SINE Alu 0 309 188 1906 145 7 0 chr17 61141612 61141908 -24296572 + AluSx SINE Alu 1 298 -14 1840 95 117 7 chr17 61142167 61142441 -24296039 - AluSx SINE Alu -8 304 1 1884 127 55 4 chr17 61143233 61143508 -24294972 + AluSg SINE Alu 1 289 -21 532 94 17 145 chr17 61143680 61143709 -24294771 + L1 LINE L1 4891 4922 -1224 2199 119 0 0 chr17 61143709 61144004 -24294476 + AluSx SINE Alu 1 295 -17 532 94 17 145 chr17 61144004 61144091 -24294389 + L1 LINE L1 4922 4992 -1154 1005 101 0 0 chr17 61144091 61144220 -24294260 + AluSg1 SINE Alu 3 131 -178 1740 165 0 0 chr17 61144227 61144500 -24293980 + AluSx SINE Alu 1 273 -39 2099 96 0 0 chr17 61144600 61144870 -24293610 - AluSc SINE Alu -39 270 1 749 174 0 15 chr17 61145013 61145145 -24293335 - FLAM_A SINE Alu -3 130 1 805 214 36 6 chr17 61145883 61146051 -24292429 + FRAM SINE Alu 3 175 -1 1500 147 9 123 chr17 61146289 61146427 -24292053 - AluJo SINE Alu 0 302 224 1720 149 13 57 chr17 61146427 61146552 -24291928 + AluJb SINE Alu 1 130 -182 2403 70 0 10 chr17 61146552 61146854 -24291626 - AluY SINE Alu -12 299 1 1720 149 13 57 chr17 61146854 61147029 -24291451 + AluJb SINE Alu 130 288 -24 1500 147 9 123 chr17 61147029 61147231 -24291249 - AluJo SINE Alu -78 224 1 1476 211 4 0 chr17 61147569 61147835 -24290645 + AluJo SINE Alu 30 296 -16 32 57 0 0 chr17 61148054 61148107 -24290373 + AT_rich Low_complexity Low_complexity 1 53 0 210 290 130 36 chr17 61148323 61148461 -24290019 + MIR3 SINE MIR 57 207 -1 1006 264 182 45 chr17 61148496 61149140 -24289340 - HAL1 LINE L1 -396 2111 1301 2109 106 0 7 chr17 61149140 61149475 -24289005 + AluSx SINE Alu 1 333 0 1006 264 182 45 chr17 61149475 61149754 -24288726 - HAL1 LINE L1 -1206 1301 1061 511 273 34 85 chr17 61149805 61149872 -24288608 - HAL1 LINE L1 -1630 877 808 2402 67 10 10 chr17 61149872 61150172 -24288308 + AluY SINE Alu 1 300 -11 511 273 34 85 chr17 61150172 61150371 -24288109 - HAL1 LINE L1 -1699 808 631 2310 169 37 0 chr17 61150371 61150774 -24287706 + MER47B DNA MER2_type 1 418 0 511 273 34 85 chr17 61150774 61150858 -24287622 - HAL1 LINE L1 -1876 631 544 396 207 0 0 chr17 61151253 61151335 -24287145 - MLT1G1 LTR MaLR 0 595 514 1106 113 0 7 chr17 61151922 61152072 -24286408 + AluSq/x SINE Alu 2 150 -162 2327 106 0 3 chr17 61152188 61152500 -24285980 - AluSq SINE Alu -2 311 1 24 0 0 0 chr17 61153100 61153124 -24285356 + AT_rich Low_complexity Low_complexity 1 24 0 2230 111 0 0 chr17 61153533 61153821 -24284659 - AluSx SINE Alu -24 288 1 380 287 56 49 chr17 61153821 61153964 -24284516 - L1 LINE L1 -1094 5052 4909 2175 79 24 3 chr17 61154532 61154824 -24283656 + AluY SINE Alu 1 298 -13 488 368 64 12 chr17 61155177 61155582 -24282898 + L2 LINE L2 2362 2787 -527 441 0 0 0 chr17 61155712 61155761 -24282719 + (TG)n Simple_repeat Simple_repeat 1 49 0 212 109 0 65 chr17 61155761 61155807 -24282673 + (GA)n Simple_repeat Simple_repeat 2 44 0 30 27 0 0 chr17 61156476 61156513 -24281967 + AT_rich Low_complexity Low_complexity 1 37 0 2099 134 0 49 chr17 61157011 61157339 -24281141 + AluSx SINE Alu 1 312 0 2168 105 7 0 chr17 61159159 61159444 -24279036 + AluSx SINE Alu 1 287 -25 240 35 0 0 chr17 61159444 61159473 -24279007 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 2065 131 0 0 chr17 61159826 61160132 -24278348 + AluSg SINE Alu 1 306 -4 2177 118 3 10 chr17 61160141 61160454 -24278026 + AluSx SINE Alu 1 311 -1 1754 97 0 0 chr17 61160630 61160858 -24277622 + AluY SINE Alu 1 228 -83 1948 87 102 0 chr17 61160897 61161161 -24277319 + AluSg SINE Alu 1 291 -19 1902 106 47 4 chr17 61161545 61161819 -24276661 + AluSq SINE Alu 21 306 -7 309 319 45 51 chr17 61162064 61162221 -24276259 + MIR SINE MIR 7 162 -100 2068 126 10 3 chr17 61162967 61163260 -24275220 - AluSx SINE Alu -17 295 1 1237 113 0 11 chr17 61163268 61163453 -24275027 - AluSq SINE Alu -2 311 129 2812 26 0 0 chr17 61163458 61163769 -24274711 - AluYa5 SINE Alu 0 311 1 2322 113 0 0 chr17 61164108 61164417 -24274063 - AluSx SINE Alu -3 309 1 24 32 0 0 chr17 61165058 61165089 -24273391 + AT_rich Low_complexity Low_complexity 1 31 0 348 219 0 0 chr17 61165919 61166001 -24272479 + CT-rich Low_complexity Low_complexity 3 84 0 2284 108 0 0 chr17 61166617 61166913 -24271567 + AluSc SINE Alu 3 298 -11 2390 69 24 0 chr17 61167260 61167551 -24270929 + AluSp SINE Alu 1 298 -15 189 0 0 0 chr17 61167939 61167960 -24270520 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 2067 121 7 0 chr17 61167960 61168241 -24270239 - AluSg SINE Alu -27 283 1 325 259 160 39 chr17 61168292 61168450 -24270030 - MIR SINE MIR -73 189 15 331 274 116 14 chr17 61168502 61168648 -24269832 - MIR SINE MIR -15 247 87 371 245 75 9 chr17 61169405 61169511 -24268969 + L2 LINE L2 3197 3309 -4 2389 51 3 10 chr17 61169533 61169825 -24268655 + AluY SINE Alu 1 290 -21 1440 67 11 0 chr17 61170473 61170651 -24267829 + AluY SINE Alu 1 180 -131 1949 121 4 21 chr17 61170751 61171032 -24267448 - AluSp SINE Alu -37 276 1 211 225 0 0 chr17 61171299 61171339 -24267141 + (TG)n Simple_repeat Simple_repeat 1 40 0 2240 103 0 0 chr17 61171339 61171631 -24266849 - AluSg SINE Alu -10 300 9 2433 85 0 0 chr17 61171639 61171934 -24266546 - AluY SINE Alu -16 295 1 2304 95 10 0 chr17 61171934 61172230 -24266250 - AluSg SINE Alu -10 300 2 261 0 0 0 chr17 61172231 61172260 -24266220 + (T)n Simple_repeat Simple_repeat 1 29 0 2004 100 82 0 chr17 61172704 61172984 -24265496 - AluSp SINE Alu -10 303 1 252 71 0 143 chr17 61172987 61173043 -24265437 - AluSp SINE Alu -171 132 85 204 227 40 80 chr17 61173246 61173321 -24265159 - MIR SINE MIR -94 168 97 252 313 35 43 chr17 61173535 61173650 -24264830 + L2 LINE L2 2953 3066 -247 * 409 326 21 14 chr17 61173644 61173788 -24264692 + L2 LINE L2 3169 3313 0 1721 191 47 155 chr17 61174218 61174414 -24264066 + L1ME3 LINE L1 5559 5775 -387 2088 101 6 32 chr17 61174414 61174730 -24263750 + AluSg SINE Alu 1 308 -2 1721 191 47 155 chr17 61174730 61174956 -24263524 + L1ME3 LINE L1 5775 5883 -279 2082 118 17 7 chr17 61174956 61175252 -24263228 + AluSq SINE Alu 1 299 -14 1721 191 47 155 chr17 61175252 61175505 -24262975 + L1ME3 LINE L1 5883 6162 0 240 331 88 31 chr17 61175790 61175950 -24262530 + MER112 DNA MER1_type 1 169 -91 2521 69 3 0 chr17 61175966 61176272 -24262208 + AluSp SINE Alu 1 307 -6 2108 89 64 0 chr17 61177042 61177323 -24261157 + AluSq SINE Alu 1 299 -14 1449 141 109 42 chr17 61177969 61178160 -24260320 + Tigger3(Golem) DNA MER2_type 1 178 -1053 2189 119 0 0 chr17 61178160 61178455 -24260025 + AluSg SINE Alu 1 295 -15 198 0 0 0 chr17 61178455 61178477 -24260003 + (TA)n Simple_repeat Simple_repeat 2 23 0 300 53 0 0 chr17 61178476 61178514 -24259966 + (TG)n Simple_repeat Simple_repeat 1 38 0 1449 141 109 42 chr17 61178477 61178604 -24259876 + Tigger3(Golem) DNA MER2_type 177 302 -929 899 188 0 0 chr17 61178634 61178788 -24259692 - AluJb SINE Alu -39 273 120 216 0 0 0 chr17 61178900 61178924 -24259556 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2075 121 4 0 chr17 61178934 61179248 -24259232 + AluSx SINE Alu 1 315 0 1587 133 8 8 chr17 61179248 61179488 -24258992 + Tigger3(Golem) DNA MER2_type 2789 3028 -1 1056 88 0 0 chr17 61179616 61179752 -24258728 - AluSq SINE Alu -48 265 130 2116 117 7 0 chr17 61179762 61180060 -24258420 - AluSp SINE Alu -13 300 1 28 29 0 0 chr17 61180926 61180961 -24257519 + AT_rich Low_complexity Low_complexity 1 35 0 2010 121 7 16 chr17 61181347 61181653 -24256827 + AluSx SINE Alu 1 303 -9 2088 107 42 3 chr17 61183459 61183748 -24254732 + AluSq SINE Alu 1 300 -13 321 43 0 0 chr17 61184211 61184258 -24254222 - AluSp/q SINE Alu 0 303 257 534 243 163 24 chr17 61185310 61185561 -24252919 - L1MC5 LINE L1 -65 7896 7611 1822 138 11 4 chr17 61185572 61185847 -24252633 - AluSg SINE Alu -7 303 27 355 239 117 76 chr17 61185886 61186150 -24252330 - L1MC5 LINE L1 -530 7431 7157 1339 152 39 26 chr17 61186160 61186390 -24252090 - AluJb SINE Alu -10 302 70 743 141 74 31 chr17 61186425 61186588 -24251892 - L1MC5 LINE L1 -832 7129 6960 1468 187 95 0 chr17 61186592 61186875 -24251605 - AluJo SINE Alu -2 310 1 1609 143 92 4 chr17 61186998 61187271 -24251209 - AluSx SINE Alu -2 310 14 2358 101 0 7 chr17 61187708 61188015 -24250465 - AluSq SINE Alu -8 305 1 1999 81 103 0 chr17 61188016 61188288 -24250192 - AluSx SINE Alu -12 300 1 21 0 0 0 chr17 61188294 61188315 -24250165 + AT_rich Low_complexity Low_complexity 1 21 0 1694 181 7 20 chr17 61188514 61188813 -24249667 + AluJb SINE Alu 1 295 -17 2029 73 59 4 chr17 61189107 61189415 -24249065 + AluSp SINE Alu 1 323 0 1255 123 0 0 chr17 61189976 61190147 -24248333 + AluSg/x SINE Alu 125 295 -17 1922 77 126 0 chr17 61190256 61190517 -24247963 + AluSp SINE Alu 1 294 -9 26 30 0 0 chr17 61190939 61190972 -24247508 + AT_rich Low_complexity Low_complexity 1 33 0 200 35 35 0 chr17 61191060 61191089 -24247391 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 803 157 0 0 chr17 61191089 61191210 -24247270 - FLAM_C SINE Alu -22 121 1 2101 127 23 0 chr17 61191219 61191519 -24246961 - AluSg SINE Alu -3 307 1 1057 191 47 28 chr17 61192057 61192272 -24246208 - MER20 DNA MER1_type 0 219 1 439 323 102 21 chr17 61192284 61192569 -24245911 + L2 LINE L2 3005 3312 -1 2411 90 0 0 chr17 61192726 61193037 -24245443 - AluY SINE Alu 0 311 1 2235 102 9 22 chr17 61193302 61193617 -24244863 - AluSp SINE Alu -2 311 1 2190 120 3 0 chr17 61193617 61193909 -24244571 - AluSx SINE Alu -19 293 1 2306 103 13 0 chr17 61194094 61194394 -24244086 - AluSx SINE Alu -8 304 1 1168 206 8 42 chr17 61194623 61194885 -24243595 + AluJb SINE Alu 59 311 -1 2132 118 10 3 chr17 61194937 61195233 -24243247 + AluSx SINE Alu 1 298 -14 2250 88 3 10 chr17 61195236 61195531 -24242949 + AluY SINE Alu 1 293 -18 2070 99 46 0 chr17 61195750 61196034 -24242446 + AluSx SINE Alu 1 297 -15 2107 127 0 3 chr17 61196058 61196358 -24242122 + AluSx SINE Alu 1 299 -13 2469 89 0 0 chr17 61196359 61196663 -24241817 + AluSx SINE Alu 1 304 -8 698 140 0 44 chr17 61196666 61196780 -24241700 + FLAM_C SINE Alu 2 110 -33 2090 107 55 0 chr17 61196846 61197137 -24241343 - AluSq SINE Alu -6 307 1 21 36 0 0 chr17 61197158 61197186 -24241294 + AT_rich Low_complexity Low_complexity 1 28 0 219 227 227 11 chr17 61198362 61198450 -24240030 - MIR SINE MIR -6 256 150 961 129 0 0 chr17 61198923 61199055 -24239425 - FLAM_C SINE Alu -1 132 1 2096 114 30 0 chr17 61199074 61199373 -24239107 - AluSx SINE Alu -4 308 1 1543 148 78 8 chr17 61199451 61199708 -24238772 + AluJb SINE Alu 16 290 -22 368 155 0 0 chr17 61199720 61199778 -24238702 + AluYb8 SINE Alu 136 193 -115 2034 131 0 0 chr17 61200599 61200907 -24237573 + AluSx SINE Alu 1 308 0 1099 147 239 0 chr17 61201896 61202114 -24236366 - AluJb SINE Alu -32 280 11 23 33 0 0 chr17 61202467 61202497 -24235983 + AT_rich Low_complexity Low_complexity 1 30 0 1473 178 14 27 chr17 61202587 61202880 -24235600 - AluJo SINE Alu -13 299 11 1620 186 11 4 chr17 61202954 61203234 -24235246 - AluJo SINE Alu -30 282 1 180 0 0 0 chr17 61203377 61203397 -24235083 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr17 61203521 61203555 -24234925 + AT_rich Low_complexity Low_complexity 1 34 0 1018 151 12 29 chr17 61203639 61203811 -24234669 - FAM SINE Alu -5 170 2 1365 118 104 9 chr17 61203948 61204160 -24234320 - AluSg/x SINE Alu -10 302 71 2119 70 3 63 chr17 61204339 61204672 -24233808 - AluSx SINE Alu 0 315 1 638 165 21 0 chr17 61205167 61205264 -24233216 + FLAM_C SINE Alu 35 133 -10 22 0 0 0 chr17 61205269 61205291 -24233189 + AT_rich Low_complexity Low_complexity 1 22 0 2244 86 36 3 chr17 61205717 61206018 -24232462 - AluSq SINE Alu -2 311 1 1362 107 0 99 chr17 61206021 61206211 -24232269 - AluSg/x SINE Alu -9 303 140 2144 121 3 13 chr17 61206211 61206388 -24232092 - AluSq SINE Alu -2 311 137 2157 121 3 0 chr17 61206388 61206686 -24231794 - AluSx SINE Alu -13 299 1 2144 121 3 13 chr17 61206686 61206822 -24231658 - AluSq SINE Alu -176 137 1 1362 107 0 99 chr17 61206822 61206873 -24231607 - AluSg/x SINE Alu -172 140 86 2355 103 0 0 chr17 61206879 61207189 -24231291 - AluSg SINE Alu 0 310 1 2365 86 3 0 chr17 61207249 61207552 -24230928 - AluSp SINE Alu -9 304 1 244 184 58 0 chr17 61207590 61207677 -24230803 + (TA)n Simple_repeat Simple_repeat 2 93 0 257 100 100 0 chr17 61207813 61207853 -24230627 + HY1 scRNA scRNA 1 44 -68 1520 140 125 7 chr17 61207981 61208260 -24230220 - AluJb SINE Alu 0 312 1 2221 92 0 10 chr17 61208682 61208977 -24229503 + AluSg SINE Alu 1 292 -18 213 39 0 0 chr17 61209858 61209884 -24228596 + (T)n Simple_repeat Simple_repeat 1 26 0 2197 89 16 16 chr17 61210750 61211053 -24227427 - AluSq SINE Alu -10 303 1 189 0 0 0 chr17 61212938 61212959 -24225521 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 2133 71 28 3 chr17 61214157 61214440 -24224040 + AluSx SINE Alu 1 290 -22 2132 112 0 0 chr17 61214605 61214908 -24223572 - AluSx SINE Alu -5 307 5 474 195 0 12 chr17 61215404 61215486 -24222994 + AluJ/FLAM SINE Alu 2 82 -230 2052 86 38 3 chr17 61215493 61215785 -24222695 + AluSp SINE Alu 1 302 -11 1481 197 30 3 chr17 61215836 61216135 -24222345 - AluJb SINE Alu -4 308 2 2099 114 16 0 chr17 61216154 61216460 -24222020 + AluSx SINE Alu 1 311 -1 1051 179 167 8 chr17 61216705 61216945 -24221535 + AluJb SINE Alu 11 288 -24 30 27 0 0 chr17 61217946 61217983 -24220497 + AT_rich Low_complexity Low_complexity 1 37 0 2257 79 0 16 chr17 61218879 61219184 -24219296 - AluSq SINE Alu -13 300 1 216 0 0 0 chr17 61219184 61219208 -24219272 + (T)n Simple_repeat Simple_repeat 1 24 0 659 131 50 0 chr17 61219208 61219307 -24219173 - U6 snRNA snRNA -3 104 1 208 221 139 70 chr17 61219640 61219726 -24218754 - MIR SINE MIR -9 253 162 2344 59 7 0 chr17 61219903 61220210 -24218270 - AluY SINE Alu -2 309 1 791 143 8 15 chr17 61220409 61220542 -24217938 - FLAM_A SINE Alu 0 133 2 1600 143 0 73 chr17 61220610 61220924 -24217556 - AluJb SINE Alu -21 291 1 1847 146 0 29 chr17 61221137 61221445 -24217035 + AluSx SINE Alu 1 299 -13 855 83 7 69 chr17 61221710 61221854 -24216626 + MER4A LTR ERV1 2 136 -528 2072 111 3 0 chr17 61221857 61222154 -24216326 + AluY SINE Alu 1 298 -13 2016 99 13 19 chr17 61222163 61222477 -24216003 + AluSx SINE Alu 1 312 0 195 42 0 0 chr17 61222481 61222505 -24215975 + (GA)n Simple_repeat Simple_repeat 1 24 0 1779 145 3 16 chr17 61222533 61222669 -24215811 + AluSx SINE Alu 1 137 -175 2243 99 3 0 chr17 61222669 61222973 -24215507 + AluSp SINE Alu 1 305 -8 1779 145 3 16 chr17 61222973 61223146 -24215334 + AluSx SINE Alu 137 306 -6 1748 144 17 14 chr17 61224489 61224780 -24213700 - AluSx SINE Alu -20 292 1 918 127 8 0 chr17 61224780 61224914 -24213566 - AluSq/x SINE Alu -177 135 1 249 257 95 0 chr17 61225173 61225247 -24213233 + L2 LINE L2 3187 3267 -5 2106 99 11 0 chr17 61225510 61225794 -24212686 + AluSp SINE Alu 2 288 -25 1919 160 13 0 chr17 61225846 61226153 -24212327 + AluJb SINE Alu 1 311 -1 1626 167 0 7 chr17 61226158 61226446 -24212034 + AluJb SINE Alu 2 287 -25 1197 148 168 31 chr17 61226459 61226715 -24211765 + AluSg1 SINE Alu 1 291 -18 1653 123 56 58 chr17 61226724 61226894 -24211586 - MER4B LTR ERV1 -269 341 172 2287 66 0 16 chr17 61226894 61227199 -24211281 + AluY SINE Alu 1 300 -11 1653 123 56 58 chr17 61227199 61227370 -24211110 - MER4B LTR ERV1 -438 172 1 2249 107 0 3 chr17 61227719 61228028 -24210452 - AluSx SINE Alu -4 308 1 1612 166 0 31 chr17 61228125 61228414 -24210066 + AluJb SINE Alu 1 280 -32 207 0 0 0 chr17 61228420 61228443 -24210037 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 256 261 123 0 chr17 61228883 61228948 -24209532 + L2 LINE L2 3241 3313 0 1933 152 0 0 chr17 61229554 61229850 -24208630 + AluJb SINE Alu 1 296 -16 186 43 0 0 chr17 61229851 61229874 -24208606 + (CA)n Simple_repeat Simple_repeat 2 24 0 1606 176 7 26 chr17 61230797 61231104 -24207376 - AluJb SINE Alu -11 301 1 1840 32 0 5 chr17 61231775 61231996 -24206484 - AluY SINE Alu -9 302 83 2265 94 0 0 chr17 61232351 61232649 -24205831 - AluSx SINE Alu -14 298 1 1952 135 0 20 chr17 61232958 61233261 -24205219 - AluSx SINE Alu -15 297 1 1992 124 0 0 chr17 61233418 61233728 -24204752 - AluSg SINE Alu 0 310 1 2178 107 3 0 chr17 61233804 61234104 -24204376 + AluSp SINE Alu 1 301 -12 1236 108 0 0 chr17 61234310 61234477 -24204003 - AluSq SINE Alu -21 292 126 2596 35 0 6 chr17 61234477 61234788 -24203692 - AluY SINE Alu -2 309 1 453 201 164 31 chr17 61234844 61235003 -24203477 - MIR SINE MIR 0 262 83 2140 96 0 26 chr17 61235097 61235400 -24203080 + AluSg SINE Alu 7 301 -9 694 195 0 8 chr17 61235750 61235878 -24202602 + AluJo SINE Alu 29 155 -157 1910 128 32 0 chr17 61235920 61236202 -24202278 - AluSq SINE Alu -16 297 7 1548 158 33 0 chr17 61236263 61236556 -24201924 - AluJo SINE Alu 0 302 1 1620 174 0 16 chr17 61236616 61236920 -24201560 - AluJo SINE Alu -13 299 1 1902 105 0 75 chr17 61237037 61237343 -24201137 + AluSx SINE Alu 1 283 -29 2260 109 0 0 chr17 61237591 61237902 -24200578 + AluSx SINE Alu 1 311 -1 1094 150 0 0 chr17 61237991 61238164 -24200316 - AluJb SINE Alu -6 306 134 2049 110 0 35 chr17 61238539 61238857 -24199623 - AluSx SINE Alu -5 307 1 894 134 20 13 chr17 61238929 61239078 -24199402 - FAM SINE Alu -16 169 20 1183 181 84 4 chr17 61239192 61239441 -24199039 + AluJo SINE Alu 5 273 -39 243 191 112 0 chr17 61239481 61239570 -24198910 + MLT1F-int LTR MaLR 1248 1346 -25 654 187 91 80 chr17 61239592 61239743 -24198737 + MLT1F LTR MaLR 5 160 -382 2024 111 0 65 chr17 61239743 61240067 -24198413 + AluSx SINE Alu 1 303 -9 654 187 91 80 chr17 61240067 61240102 -24198378 + MLT1F LTR MaLR 160 193 -349 1738 142 6 57 chr17 61240176 61240320 -24198160 + AluJo SINE Alu 1 151 -161 2151 75 4 0 chr17 61240320 61240627 -24197853 + AluSc SINE Alu 1 308 0 1738 142 6 57 chr17 61240627 61240799 -24197681 + AluJo SINE Alu 151 302 -10 2068 108 3 29 chr17 61240956 61241270 -24197210 + AluSg SINE Alu 1 306 -4 476 265 151 5 chr17 61241597 61241782 -24196698 + HAL1 LINE L1 1 212 -2295 1775 165 6 37 chr17 61241841 61242163 -24196317 + AluSx SINE Alu 1 312 0 755 272 140 28 chr17 61242178 61242571 -24195909 + HAL1 LINE L1 329 765 -1742 219 321 245 0 chr17 61242618 61242724 -24195756 - L2 LINE L2 -8 3305 3174 2018 253 73 45 chr17 61242737 61242963 -24195517 + HAL1 LINE L1 1409 1627 -880 2087 98 3 14 chr17 61242963 61243260 -24195220 - AluY SINE Alu -17 294 1 2018 253 73 45 chr17 61243260 61243558 -24194922 + HAL1 LINE L1 1627 1963 -544 1669 159 3 33 chr17 61243558 61243723 -24194757 - AluJo SINE Alu -12 300 147 1728 124 28 24 chr17 61243723 61244014 -24194466 - AluY SINE Alu -19 292 1 1669 159 3 33 chr17 61244014 61244149 -24194331 - AluJo SINE Alu -165 147 9 2018 253 73 45 chr17 61244149 61244361 -24194119 + HAL1 LINE L1 1963 2167 -340 396 207 0 0 chr17 61244391 61244502 -24193978 + (TG)n Simple_repeat Simple_repeat 2 112 0 1966 105 24 14 chr17 61244532 61244826 -24193654 - AluSq SINE Alu -16 297 1 338 218 23 0 chr17 61244852 61244939 -24193541 + HAL1 LINE L1 2305 2393 -114 1909 159 0 3 chr17 61245004 61245313 -24193167 - AluJb SINE Alu -4 308 1 2302 93 0 7 chr17 61245345 61245655 -24192825 + AluSg SINE Alu 1 308 -2 2501 50 0 0 chr17 61245670 61245972 -24192508 + AluY SINE Alu 1 302 -9 275 188 16 0 chr17 61245972 61246036 -24192444 - L1ME2 LINE L1 -10 6154 6090 25 0 0 0 chr17 61246069 61246094 -24192386 + AT_rich Low_complexity Low_complexity 1 25 0 2002 110 10 13 chr17 61246833 61247133 -24191347 - AluSc SINE Alu -6 303 5 1845 102 48 44 chr17 61247229 61247522 -24190958 + AluSg SINE Alu 1 294 -16 1529 207 7 7 chr17 61247943 61248107 -24190373 - AluJo SINE Alu -12 300 134 2089 115 6 10 chr17 61248107 61248419 -24190061 - AluSp SINE Alu -2 311 1 1529 207 7 7 chr17 61248419 61248554 -24189926 - AluJo SINE Alu -177 135 1 1861 133 17 0 chr17 61248628 61248921 -24189559 - AluSx SINE Alu -14 298 1 452 157 0 124 chr17 61249139 61249260 -24189220 - L2 LINE L2 -544 2770 2665 2018 95 41 34 chr17 61249262 61249556 -24188924 + AluSg SINE Alu 1 296 -14 420 120 0 40 chr17 61249557 61249632 -24188848 + L1MB8 LINE L1 6107 6178 0 826 218 148 13 chr17 61250129 61250247 -24188233 + MIR SINE MIR 3 104 -158 1893 116 34 0 chr17 61250247 61250541 -24187939 - AluSx SINE Alu -8 304 1 826 218 148 13 chr17 61250541 61250651 -24187829 + MIR SINE MIR 104 262 0 2089 99 30 7 chr17 61250755 61251057 -24187423 + AluSp SINE Alu 1 309 -4 1877 141 0 3 chr17 61251208 61251499 -24186981 - AluSx SINE Alu -22 290 1 1989 120 3 3 chr17 61251515 61251815 -24186665 - AluSq SINE Alu -13 300 1 2141 97 0 3 chr17 61251830 61252119 -24186361 - AluSc SINE Alu -21 288 1 2284 92 0 0 chr17 61252268 61252574 -24185906 - AluY SINE Alu -3 308 3 1148 58 0 0 chr17 61253055 61253194 -24185286 - MER85 DNA T2_type 0 139 1 1441 125 17 66 chr17 61253296 61253444 -24185036 - L1MA4 LINE L1 -22 6278 6124 1980 112 28 0 chr17 61253444 61253731 -24184749 - AluSq SINE Alu -18 295 1 1441 125 17 66 chr17 61253731 61253844 -24184636 - L1MA4 LINE L1 -176 6124 6030 835 156 16 0 chr17 61253844 61253972 -24184508 - FLAM_C SINE Alu -1 132 3 1441 125 17 66 chr17 61253972 61253997 -24184483 - L1MA4 LINE L1 -270 6030 6005 2108 121 0 10 chr17 61254035 61254348 -24184132 - AluSx SINE Alu -1 311 2 1151 162 0 144 chr17 61254365 61254544 -24183936 - AluJo SINE Alu -17 295 92 1980 142 0 0 chr17 61254544 61254847 -24183633 - AluSx SINE Alu -9 303 1 2012 123 13 13 chr17 61254857 61255025 -24183455 - AluSx SINE Alu -11 301 131 1996 111 13 13 chr17 61255025 61255332 -24183148 - AluSq SINE Alu -6 307 1 2012 123 13 13 chr17 61255332 61255464 -24183016 - AluSx SINE Alu -180 132 1 1151 162 0 144 chr17 61255464 61255600 -24182880 - AluJo SINE Alu -230 82 16 356 129 0 252 chr17 61255714 61255741 -24182739 + MER5B DNA MER1_type 1 33 -145 2114 120 0 3 chr17 61255741 61256042 -24182438 + AluSx SINE Alu 1 300 -12 356 129 0 252 chr17 61256042 61256093 -24182387 + MER5B DNA MER1_type 33 95 -83 2281 81 0 3 chr17 61256093 61256390 -24182090 + AluSx SINE Alu 1 296 -16 356 129 0 252 chr17 61256390 61256401 -24182079 + MER5B DNA MER1_type 95 44 -134 1918 154 0 7 chr17 61256401 61256707 -24181773 + AluSx SINE Alu 1 304 -8 356 129 0 252 chr17 61256707 61256762 -24181718 + MER5B DNA MER1_type 43 110 -68 216 0 0 0 chr17 61257418 61257442 -24181038 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 456 206 0 31 chr17 61257442 61257533 -24180947 + MER5B DNA MER1_type 91 178 0 1279 97 6 0 chr17 61258243 61258418 -24180062 + AluSg/x SINE Alu 133 308 -4 242 267 0 17 chr17 61258434 61258494 -24179986 - L2 LINE L2 -10 3262 3204 1963 128 7 14 chr17 61258531 61258665 -24179815 + AluSx SINE Alu 1 134 -178 2124 91 0 3 chr17 61258665 61258984 -24179496 + AluSq SINE Alu 1 318 0 1963 128 7 14 chr17 61258984 61259145 -24179335 + AluSx SINE Alu 134 295 -17 212 366 21 38 chr17 61259253 61259439 -24179041 - L2 LINE L2 -412 2902 2720 1218 205 13 17 chr17 61259452 61259691 -24178789 - AluJo SINE Alu -74 238 1 2350 68 0 3 chr17 61259701 61259997 -24178483 - AluY SINE Alu -16 295 1 244 316 155 16 chr17 61260245 61260432 -24178048 - L2 LINE L2 -965 2349 2137 2060 98 54 0 chr17 61260478 61260774 -24177706 - AluSq SINE Alu -1 312 1 2204 92 7 0 chr17 61260774 61261076 -24177404 - AluSx SINE Alu -7 305 1 2296 102 0 6 chr17 61261147 61261461 -24177019 + AluSx SINE Alu 1 312 0 2020 107 7 0 chr17 61261470 61261750 -24176730 + AluSx SINE Alu 21 302 -10 438 139 0 47 chr17 61261762 61261903 -24176577 + FAM SINE Alu 1 185 0 223 308 193 43 chr17 61261910 61262011 -24176469 - L2 LINE L2 -1390 1924 1839 2282 78 3 0 chr17 61262011 61262304 -24176176 - AluSg SINE Alu -16 294 1 223 308 193 43 chr17 61262304 61262576 -24175904 - L2 LINE L2 -1475 1839 1495 2261 84 0 21 chr17 61262910 61263197 -24175283 - AluSg SINE Alu -29 281 1 1817 147 16 22 chr17 61263450 61263764 -24174716 + AluJb SINE Alu 1 312 0 884 105 0 30 chr17 61264024 61264157 -24174323 + FLAM_C SINE Alu 3 131 -2 509 228 18 0 chr17 61264292 61264406 -24174074 - MIR SINE MIR -88 174 59 22 0 0 0 chr17 61265123 61265145 -24173335 + GC_rich Low_complexity Low_complexity 1 22 0 2098 152 3 0 chr17 61266358 61266667 -24171813 - AluSx SINE Alu -2 310 1 252 0 0 0 chr17 61266744 61266772 -24171708 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2332 86 7 7 chr17 61266780 61267082 -24171398 - AluSc SINE Alu -7 302 1 2183 109 3 3 chr17 61267082 61267384 -24171096 - AluSx SINE Alu -10 302 1 2051 129 3 10 chr17 61267383 61267693 -24170787 - AluSx SINE Alu -2 310 3 * 2058 102 33 0 chr17 61267943 61268247 -24170233 - AluSp SINE Alu 0 313 1 21 0 0 0 chr17 61268675 61268696 -24169784 + AT_rich Low_complexity Low_complexity 1 21 0 224 198 112 5 chr17 61268795 61268878 -24169602 - MIR SINE MIR -62 146 72 192 283 67 0 chr17 61268972 61269032 -24169448 + MIR SINE MIR 49 112 -150 2304 105 0 0 chr17 61269447 61269743 -24168737 + AluSg SINE Alu 1 296 -14 2436 78 0 10 chr17 61270210 61270519 -24167961 - AluSq SINE Alu -7 306 1 2397 83 0 3 chr17 61270683 61270983 -24167497 + AluSq SINE Alu 1 299 -14 1233 207 11 40 chr17 61271645 61271920 -24166560 + AluJo SINE Alu 1 267 -45 540 0 0 0 chr17 61271934 61271994 -24166486 + (CA)n Simple_repeat Simple_repeat 2 61 0 2290 97 10 0 chr17 61272125 61272425 -24166055 - AluSp SINE Alu -10 303 1 445 158 13 22 chr17 61272553 61272642 -24165838 - L1MB8 LINE L1 -52 6120 6041 1966 139 4 0 chr17 61272642 61272915 -24165565 + AluSx SINE Alu 1 274 -38 2607 38 0 0 chr17 61272921 61273211 -24165269 - AluY SINE Alu -21 290 1 863 165 0 0 chr17 61273270 61273403 -24165077 + FLAM_C SINE Alu 1 133 0 2703 178 40 107 chr17 61273414 61273522 -24164958 - L1MB7 LINE L1 -145 6039 5925 1541 151 81 11 chr17 61273522 61273794 -24164686 + AluJb SINE Alu 12 302 -10 2703 178 40 107 chr17 61273794 61273863 -24164617 - L1MB7 LINE L1 -259 5925 5853 2331 105 0 0 chr17 61273863 61274159 -24164321 - AluSx SINE Alu -8 304 9 2703 178 40 107 chr17 61274159 61274330 -24164150 - L1MB7 LINE L1 -331 5853 5672 1667 185 3 13 chr17 61274330 61274643 -24163837 - AluJo SINE Alu -2 310 1 2703 178 40 107 chr17 61274643 61274661 -24163819 - L1MB7 LINE L1 -512 5672 5654 1836 180 0 3 chr17 61274661 61274795 -24163685 + AluJb SINE Alu 1 134 -178 2257 99 20 0 chr17 61274795 61275089 -24163391 + AluSg1 SINE Alu 2 301 -8 1836 180 0 3 chr17 61275089 61275260 -24163220 + AluJb SINE Alu 134 305 -7 2703 178 40 107 chr17 61275260 61275675 -24162805 - L1MB7 LINE L1 -530 5654 5213 658 156 62 23 chr17 61275675 61275803 -24162677 - FLAM_C SINE Alu 0 133 1 2703 178 40 107 chr17 61275803 61275831 -24162649 - L1MB7 LINE L1 -971 5213 5185 2312 85 0 0 chr17 61275831 61276141 -24162339 - AluSg SINE Alu 0 310 1 2703 178 40 107 chr17 61276141 61276163 -24162317 - L1MB7 LINE L1 -999 5185 5163 2095 113 7 0 chr17 61276163 61276455 -24162025 - AluSq SINE Alu -18 295 2 2296 101 0 0 chr17 61276461 61276757 -24161723 - AluSg SINE Alu -14 296 1 2703 178 40 107 chr17 61276757 61276785 -24161695 - L1MB7 LINE L1 -1026 5158 5130 1759 161 53 3 chr17 61276785 61277070 -24161410 - AluJb SINE Alu -13 299 1 2703 178 40 107 chr17 61277070 61277264 -24161216 - L1MB7 LINE L1 -1054 5130 5016 2307 98 0 3 chr17 61277271 61277568 -24160912 - AluSq SINE Alu -17 296 1 691 204 7 7 chr17 61277580 61277717 -24160763 - FLAM_A SINE Alu -5 137 1 1893 189 18 107 chr17 61277720 61278145 -24160335 - L1MB7 LINE L1 -1110 5036 4575 1986 129 11 7 chr17 61278145 61278424 -24160056 - AluSx SINE Alu -32 280 1 1893 189 18 107 chr17 61278424 61278445 -24160035 - L1MB7 LINE L1 -1571 4575 4554 2157 126 7 0 chr17 61278445 61278755 -24159725 - AluSx SINE Alu 0 312 1 2436 73 0 10 chr17 61278762 61279063 -24159417 - AluY SINE Alu -11 300 3 1893 189 18 107 chr17 61279063 61279303 -24159177 - L1MB7 LINE L1 -1598 4548 4460 1510 174 27 15 chr17 61279303 61279562 -24158918 - AluJb SINE Alu -15 297 36 1893 189 18 107 chr17 61279562 61279698 -24158782 - L1MB7 LINE L1 -1686 4460 4313 2301 92 0 26 chr17 61279959 61280263 -24158217 - AluSx SINE Alu -16 296 1 2829 16 0 0 chr17 61280376 61280680 -24157800 - AluY SINE Alu -7 304 1 2246 111 0 3 chr17 61280683 61280990 -24157490 - AluSp SINE Alu -7 306 1 252 0 0 0 chr17 61280990 61281018 -24157462 + (T)n Simple_repeat Simple_repeat 1 28 0 2373 110 0 0 chr17 61281018 61281328 -24157152 - AluSg SINE Alu 0 310 1 2198 97 0 76 chr17 61281357 61281494 -24156986 + AluSx SINE Alu 1 147 -165 2207 105 3 0 chr17 61281494 61281780 -24156700 + AluY SINE Alu 1 287 -24 2198 97 0 76 chr17 61281780 61281972 -24156508 + AluSx SINE Alu 147 305 -7 687 217 35 28 chr17 61281974 61282117 -24156363 + FAM SINE Alu 15 158 -27 1086 111 0 0 chr17 61282763 61282907 -24155573 + AluSq/x SINE Alu 1 144 -168 2219 99 0 45 chr17 61283120 61283301 -24155179 - AluSx SINE Alu -9 303 140 1751 90 5 0 chr17 61283301 61283523 -24154957 - AluSq SINE Alu -6 307 85 2219 99 0 45 chr17 61283523 61283654 -24154826 - AluSx SINE Alu -172 140 5 21 57 0 0 chr17 61284195 61284230 -24154250 + AT_rich Low_complexity Low_complexity 1 35 0 222 250 0 0 chr17 61284760 61284808 -24153672 + L2 LINE L2 3225 3272 0 674 188 9 0 chr17 61285340 61285452 -24153028 + MER2 DNA MER2_type 22 134 -211 2303 110 0 0 chr17 61285454 61285763 -24152717 - AluSx SINE Alu -3 309 1 441 200 0 0 chr17 61285801 61285876 -24152604 + MER2 DNA MER2_type 268 342 -3 21 36 0 0 chr17 61285981 61286009 -24152471 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr17 61286070 61286099 -24152381 + AT_rich Low_complexity Low_complexity 1 29 0 264 114 0 0 chr17 61286509 61286544 -24151936 - U2 snRNA snRNA -153 35 1 706 228 0 0 chr17 61286610 61286737 -24151743 + FLAM_A SINE Alu 1 127 -6 2264 107 0 3 chr17 61286741 61287050 -24151430 - AluY SINE Alu -2 309 2 2184 120 0 0 chr17 61287237 61287528 -24150952 - AluSx SINE Alu -21 291 1 2408 73 30 0 chr17 61287538 61287839 -24150641 - AluSp SINE Alu -3 310 1 2125 114 3 0 chr17 61287871 61288161 -24150319 - AluSx SINE Alu -20 292 2 2143 229 94 98 chr17 61288229 61288894 -24149586 - HAL1 LINE L1 -474 2033 1367 1640 142 42 48 chr17 61288894 61289183 -24149297 - AluJo SINE Alu -25 287 1 2143 229 94 98 chr17 61289183 61289203 -24149277 - HAL1 LINE L1 -1140 1367 1348 1562 193 7 10 chr17 61289203 61289499 -24148981 - AluJo SINE Alu -17 295 1 2143 229 94 98 chr17 61289499 61289704 -24148776 - HAL1 LINE L1 -1159 1348 1144 2360 79 7 0 chr17 61289704 61289994 -24148486 - AluSp SINE Alu -21 292 1 2143 229 94 98 chr17 61289994 61290115 -24148365 - HAL1 LINE L1 -1363 1144 1024 2154 123 0 16 chr17 61290115 61290432 -24148048 - AluSx SINE Alu 0 312 1 2143 229 94 98 chr17 61290432 61290589 -24147891 - HAL1 LINE L1 -1483 1024 865 1789 137 4 0 chr17 61290589 61290851 -24147629 - AluSx SINE Alu -7 305 43 2143 229 94 98 chr17 61290851 61290937 -24147543 - HAL1 LINE L1 -1642 865 780 678 109 0 0 chr17 61291006 61291098 -24147382 + AluSq SINE Alu 2 93 -220 813 153 0 15 chr17 61291098 61291229 -24147251 + AluSp/q SINE Alu 166 294 -19 227 312 213 22 chr17 61291240 61291564 -24146916 - HAL1 LINE L1 -1804 703 318 1699 99 0 0 chr17 61291869 61292080 -24146400 - AluSq SINE Alu -102 211 1 2028 149 3 0 chr17 61292464 61292760 -24145720 - AluSx SINE Alu -15 297 1 252 281 21 10 chr17 61293714 61293803 -24144677 - L1MC4 LINE L1 -142 7900 7808 2218 113 0 0 chr17 61293803 61294103 -24144377 - AluSx SINE Alu -12 300 1 410 220 79 45 chr17 61294105 61294282 -24144198 - L1MC4a LINE L1 -569 7239 7057 2181 99 45 3 chr17 61294314 61294606 -24143874 - AluSc SINE Alu -5 304 1 2127 131 10 0 chr17 61294627 61294924 -24143556 - AluSg SINE Alu -10 300 1 1267 147 3 127 chr17 61294924 61295223 -24143257 - AluSg1 SINE Alu -15 294 33 559 274 103 84 chr17 61295223 61295262 -24143218 - L1MC4a LINE L1 -1226 6582 6545 2297 110 0 0 chr17 61295262 61295570 -24142910 - AluSg1 SINE Alu -1 308 1 559 274 103 84 chr17 61295570 61295815 -24142665 - L1MC4a LINE L1 -1263 6545 6306 2259 98 11 0 chr17 61295815 61296102 -24142378 + AluSg SINE Alu 2 291 -19 559 274 103 84 chr17 61296102 61296558 -24141922 - L1MC4a LINE L1 -1502 6306 5817 2339 83 0 10 chr17 61296558 61296893 -24141587 - AluY SINE Alu 0 311 1 559 274 103 84 chr17 61296893 61297082 -24141398 - L1MC4a LINE L1 -1991 5817 5633 729 118 15 44 chr17 61297573 61297709 -24140771 - FLAM_C SINE Alu -1 132 1 2257 107 0 3 chr17 61298847 61299146 -24139334 - AluSp SINE Alu -15 298 1 2150 114 0 3 chr17 61299270 61299569 -24138911 - AluSq SINE Alu -15 298 1 3443 165 146 81 chr17 61299577 61299641 -24138839 - L1MC4 LINE L1 -2 8040 7982 2191 107 0 0 chr17 61299641 61299921 -24138559 + AluSg SINE Alu 2 281 -29 3443 165 146 81 chr17 61299921 61300036 -24138444 - L1MC4 LINE L1 -60 7982 7876 180 111 0 0 chr17 61300036 61300063 -24138417 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3443 165 146 81 chr17 61300063 61300132 -24138348 - L1MC4 LINE L1 -166 7876 7813 1965 96 114 11 chr17 61300132 61300412 -24138068 - AluSg SINE Alu -1 309 1 3443 165 146 81 chr17 61300412 61300889 -24137591 - L1MC4 LINE L1 -229 7813 7228 1815 103 118 11 chr17 61300889 61301161 -24137319 - AluSg1 SINE Alu -8 301 1 3443 165 146 81 chr17 61301161 61301440 -24137040 - L1MC4 LINE L1 -814 7228 6968 2097 112 10 33 chr17 61303885 61304189 -24134291 + AluSq SINE Alu 1 297 -16 1806 171 0 7 chr17 61304313 61304605 -24133875 - AluJb SINE Alu -12 300 11 219 342 53 44 chr17 61306490 61306604 -24131876 - MIR SINE MIR -82 180 66 625 200 0 44 chr17 61306668 61306803 -24131677 + FLAM_A SINE Alu 1 129 -4 2122 95 0 34 chr17 61307230 61307524 -24130956 - AluSx SINE Alu -8 304 21 2119 104 18 7 chr17 61307560 61307869 -24130611 - AluSx SINE Alu 0 312 1 1254 170 0 5 chr17 61308330 61308530 -24129950 + AluJo SINE Alu 5 203 -109 1893 175 0 10 chr17 61308621 61308924 -24129556 - AluJb SINE Alu -12 300 1 2884 135 13 25 chr17 61309127 61309600 -24128880 - MLT1C LTR MaLR 0 467 1 1015 188 61 28 chr17 61309918 61310131 -24128349 - AluJb SINE Alu -1 311 92 758 184 154 26 chr17 61310263 61310462 -24128018 - L1MC5 LINE L1 -496 7465 7230 405 0 0 0 chr17 61310462 61310507 -24127973 + (TG)n Simple_repeat Simple_repeat 2 46 0 758 184 154 26 chr17 61310507 61310541 -24127939 - L1MC5 LINE L1 -731 7230 7202 585 217 174 12 chr17 61310557 61310718 -24127762 + MER20 DNA MER1_type 33 219 0 1168 188 49 150 chr17 61310718 61311032 -24127448 - L1MC5 LINE L1 -755 7206 6965 1647 199 6 6 chr17 61311032 61311343 -24127137 - AluJb SINE Alu 0 312 2 1168 188 49 150 chr17 61311343 61311556 -24126924 - L1MC5 LINE L1 -996 6965 6732 2271 116 0 3 chr17 61312038 61312348 -24126132 - AluSg SINE Alu -1 309 1 22 0 0 0 chr17 61312816 61312838 -24125642 + AT_rich Low_complexity Low_complexity 1 22 0 1421 180 78 18 chr17 61313082 61313366 -24125114 - AluJb SINE Alu -11 301 1 1818 73 5 0 chr17 61313398 61313618 -24124862 - AluSg/x SINE Alu -13 299 79 2509 70 0 0 chr17 61313618 61313918 -24124562 - AluY SINE Alu -9 302 3 644 92 0 0 chr17 61313920 61314007 -24124473 - AluSc SINE Alu -222 87 1 1724 102 4 17 chr17 61314523 61314758 -24123722 + AluSx SINE Alu 64 295 -17 2199 85 24 14 chr17 61315359 61315652 -24122828 + AluSg SINE Alu 1 296 -14 312 172 0 0 chr17 61315653 61315711 -24122769 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 842 180 0 30 chr17 61316198 61316365 -24122115 + FRAM SINE Alu 1 162 -4 2181 107 0 16 chr17 61316554 61316862 -24121618 - AluSx SINE Alu -7 305 3 808 277 158 49 chr17 61317514 61318164 -24120316 - L2 LINE L2 0 3313 2592 26 0 0 0 chr17 61319058 61319084 -24119396 + AT_rich Low_complexity Low_complexity 1 26 0 821 97 65 24 chr17 61323831 61323955 -24114525 - FLAM_C SINE Alu -14 129 1 2113 102 0 38 chr17 61324950 61325263 -24113217 - AluSx SINE Alu -11 301 1 226 254 109 0 chr17 61325263 61325318 -24113162 - MIR3 SINE MIR -28 180 120 315 268 57 72 chr17 61326279 61326478 -24112002 + MER5B DNA MER1_type 1 178 0 377 189 62 189 chr17 61377036 61377113 -24061367 - HAL1 LINE L1 -1447 1060 975 2152 123 0 16 chr17 61377113 61377430 -24061050 - AluSx SINE Alu 0 312 1 377 189 62 189 chr17 61377430 61377587 -24060893 - HAL1 LINE L1 -1532 975 875 1773 138 4 0 chr17 61377587 61377847 -24060633 - AluSx SINE Alu -9 303 43 377 189 62 189 chr17 61377847 61377933 -24060547 - HAL1 LINE L1 -1632 875 780 681 108 0 0 chr17 61378001 61378094 -24060386 + AluSq SINE Alu 1 93 -220 835 145 0 15 chr17 61378094 61378225 -24060255 + AluSp/q SINE Alu 166 294 -19 476 301 137 85 chr17 61378236 61378754 -24059726 - HAL1 LINE L1 -1804 703 159 1678 99 0 0 chr17 61378864 61379075 -24059405 - AluSq SINE Alu -102 211 1 2017 149 3 0 chr17 61379459 61379755 -24058725 - AluSx SINE Alu -15 297 1 2215 110 0 0 chr17 61380798 61381098 -24057382 - AluSx SINE Alu -12 300 1 356 220 79 45 chr17 61381100 61381277 -24057203 - L1MC4a LINE L1 -569 7239 7057 2168 99 45 3 chr17 61381309 61381601 -24056879 - AluSc SINE Alu -5 304 1 2128 128 10 0 chr17 61381622 61381918 -24056562 - AluSg SINE Alu -11 299 1 1270 147 3 127 chr17 61381918 61382217 -24056263 - AluSg1 SINE Alu -15 294 33 242 280 61 68 chr17 61382217 61382256 -24056224 - L1MC4a LINE L1 -1226 6582 6544 2281 110 0 0 chr17 61382256 61382564 -24055916 - AluSg1 SINE Alu -1 308 1 242 280 61 68 chr17 61382564 61382809 -24055671 - L1MC4a LINE L1 -1264 6544 6300 2178 98 14 0 chr17 61382809 61383094 -24055386 + AluSg SINE Alu 2 290 -20 242 280 61 68 chr17 61383094 61383265 -24055215 - L1MC4a LINE L1 -1508 6300 6129 475 268 130 42 chr17 61383386 61383550 -24054930 - L1MC4a LINE L1 -1791 6017 5869 2307 83 0 10 chr17 61383550 61383885 -24054595 - AluY SINE Alu 0 311 1 475 268 130 42 chr17 61383885 61384074 -24054406 - L1MC4a LINE L1 -1939 5869 5633 737 110 15 44 chr17 61384565 61384701 -24053779 - FLAM_C SINE Alu -1 132 1 185 226 113 0 chr17 61384876 61384929 -24053551 + L2 LINE L2 3255 3313 0 2221 110 0 3 chr17 61385839 61386138 -24052342 - AluSp SINE Alu -15 298 1 2132 114 0 3 chr17 61386262 61386561 -24051919 - AluSq SINE Alu -15 298 1 3103 166 146 78 chr17 61386569 61386633 -24051847 - L1MC4 LINE L1 -2 8040 7982 2159 111 0 0 chr17 61386633 61386913 -24051567 + AluSg SINE Alu 2 281 -29 3103 166 146 78 chr17 61386913 61387024 -24051456 - L1MC4 LINE L1 -60 7982 7880 180 111 0 0 chr17 61387024 61387051 -24051429 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3103 166 146 78 chr17 61387051 61387120 -24051360 - L1MC4 LINE L1 -162 7880 7817 1953 100 114 11 chr17 61387120 61387401 -24051079 - AluSg SINE Alu 0 310 1 3103 166 146 78 chr17 61387401 61387878 -24050602 - L1MC4 LINE L1 -225 7817 7226 1813 99 118 11 chr17 61387878 61388150 -24050330 - AluSg1 SINE Alu -8 301 1 3103 166 146 78 chr17 61388150 61388429 -24050051 - L1MC4 LINE L1 -816 7226 6968 2075 115 10 33 chr17 61390874 61391178 -24047302 + AluSq SINE Alu 1 297 -16 1831 170 0 7 chr17 61391302 61391596 -24046884 - AluJb SINE Alu -10 302 11 253 333 141 34 chr17 61393481 61393643 -24044837 - MIR SINE MIR -57 151 8 633 200 0 44 chr17 61393659 61393794 -24044686 + FLAM_A SINE Alu 1 129 -4 2106 95 0 34 chr17 61394222 61394516 -24043964 - AluSx SINE Alu -8 304 21 2100 104 18 7 chr17 61394552 61394861 -24043619 - AluSx SINE Alu 0 312 1 1256 170 0 5 chr17 61395322 61395522 -24042958 + AluJo SINE Alu 5 203 -109 1930 172 0 10 chr17 61395613 61395916 -24042564 - AluJb SINE Alu -12 300 1 2835 133 13 25 chr17 61396119 61396592 -24041888 - MLT1C LTR MaLR 0 467 1 998 188 61 38 chr17 61396910 61397123 -24041357 - AluJb SINE Alu -3 309 92 669 184 154 26 chr17 61397252 61397451 -24041029 - L1MC5 LINE L1 -496 7465 7230 369 0 0 0 chr17 61397451 61397492 -24040988 + (TG)n Simple_repeat Simple_repeat 2 42 0 669 184 154 26 chr17 61397492 61397526 -24040954 - L1MC5 LINE L1 -731 7230 7202 537 211 174 12 chr17 61397542 61397703 -24040777 + MER20 DNA MER1_type 33 219 0 987 188 49 150 chr17 61397703 61398017 -24040463 - L1MC5 LINE L1 -755 7206 6965 1617 200 10 7 chr17 61398017 61398327 -24040153 - AluJb SINE Alu 0 312 2 987 188 49 150 chr17 61398327 61398540 -24039940 - L1MC5 LINE L1 -996 6965 6732 2248 117 0 3 chr17 61399022 61399330 -24039150 - AluSg SINE Alu -3 307 1 21 0 0 0 chr17 61399798 61399819 -24038661 + AT_rich Low_complexity Low_complexity 1 21 0 1461 179 77 18 chr17 61400063 61400348 -24038132 - AluJb SINE Alu -10 302 1 1804 73 5 0 chr17 61400380 61400600 -24037880 - AluSg/x SINE Alu -13 297 77 2502 76 0 0 chr17 61400600 61400902 -24037578 - AluY SINE Alu -9 302 1 656 92 0 0 chr17 61400902 61400989 -24037491 - AluSc SINE Alu -222 87 1 1741 102 4 17 chr17 61401505 61401740 -24036740 + AluSx SINE Alu 64 295 -17 2209 86 24 14 chr17 61402341 61402633 -24035847 + AluSg SINE Alu 1 295 -15 342 153 0 0 chr17 61402635 61402694 -24035786 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 852 180 0 30 chr17 61403181 61403348 -24035132 + FRAM SINE Alu 1 162 -4 2211 107 0 16 chr17 61403537 61403847 -24034633 - AluSx SINE Alu -5 307 3 818 277 158 49 chr17 61404499 61405149 -24033331 - L2 LINE L2 0 3313 2592 26 0 0 0 chr17 61406045 61406071 -24032409 + AT_rich Low_complexity Low_complexity 1 26 0 832 97 65 24 chr17 61410817 61410941 -24027539 - FLAM_C SINE Alu -14 129 1 2119 103 0 39 chr17 61411936 61412248 -24026232 - AluSx SINE Alu -12 300 1 225 254 109 0 chr17 61412248 61412303 -24026177 - MIR3 SINE MIR -28 180 120 313 268 57 72 chr17 61413264 61413463 -24025017 + MER5B DNA MER1_type 1 178 0 23 54 0 0 chr17 61416213 61416250 -24022230 + AT_rich Low_complexity Low_complexity 1 37 0 1977 101 73 0 chr17 61416331 61416617 -24021863 + AluSx SINE Alu 1 307 -5 1237 274 197 13 chr17 61417491 61418125 -24020355 + L2 LINE L2 1827 2577 -737 295 257 88 58 chr17 61418305 61418387 -24020093 - L2 LINE L2 -15 3298 3220 2101 117 34 0 chr17 61418387 61418678 -24019802 + AluSg SINE Alu 1 301 -9 295 257 88 58 chr17 61418678 61418766 -24019714 - L2 LINE L2 -93 3220 3123 237 151 0 0 chr17 61419185 61419238 -24019242 + A-rich Low_complexity Low_complexity 1 53 0 2074 112 3 10 chr17 61419276 61419570 -24018910 + AluSx SINE Alu 1 292 -20 402 217 121 0 chr17 61419689 61419772 -24018708 - FLAM_A SINE Alu -19 123 31 1966 161 0 3 chr17 61419781 61420085 -24018395 - AluJb SINE Alu -9 303 1 2258 106 3 0 chr17 61420323 61420624 -24017856 - AluSx SINE Alu -10 302 1 2426 89 0 0 chr17 61420630 61420932 -24017548 - AluY SINE Alu -9 302 1 307 208 65 0 chr17 61423991 61424068 -24014412 + L1MC3 LINE L1 7696 7777 -8 2013 111 3 38 chr17 61424084 61424400 -24014080 + AluSx SINE Alu 1 305 -7 231 125 0 0 chr17 61424400 61424440 -24014040 + L1MC3 LINE L1 7738 7777 -8 2269 77 3 7 chr17 61424460 61424746 -24013734 + AluSc SINE Alu 5 289 -20 2203 89 0 3 chr17 61424752 61425044 -24013436 + AluSx SINE Alu 1 291 -21 1597 186 38 3 chr17 61425425 61425716 -24012764 + AluJb SINE Alu 1 301 -11 192 382 0 0 chr17 61425943 61426011 -24012469 - L2 LINE L2 0 3272 3205 954 161 0 0 chr17 61426034 61426171 -24012309 + AluSq/x SINE Alu 1 137 -176 2158 117 10 0 chr17 61426171 61426471 -24012009 + AluSx SINE Alu 1 303 -9 814 134 16 0 chr17 61426646 61426773 -24011707 - AluSg/x SINE Alu -9 303 175 236 278 248 33 chr17 61426907 61427209 -24011271 - L2 LINE L2 -439 2875 2509 2299 97 3 0 chr17 61427599 61427899 -24010581 - AluSg SINE Alu -9 301 1 298 320 20 33 chr17 61428085 61428235 -24010245 - L2 LINE L2 -896 2418 2271 1283 195 74 114 chr17 61428307 61428554 -24009926 - L1MDa LINE L1 -1886 4654 4399 2393 89 0 6 chr17 61428554 61428867 -24009613 - AluSx SINE Alu -1 311 1 2026 128 7 3 chr17 61428869 61429166 -24009314 - AluSx SINE Alu -14 298 1 1283 195 74 114 chr17 61429166 61429336 -24009144 - L1MDa LINE L1 -2142 4398 4251 1364 105 5 11 chr17 61429337 61429528 -24008952 - AluSg/x SINE Alu -4 306 117 2178 114 0 0 chr17 61429543 61429848 -24008632 - AluSx SINE Alu 0 305 1 1756 241 150 19 chr17 61429849 61430464 -24008016 - L1MDa LINE L1 -2294 4246 3552 1712 181 0 7 chr17 61430492 61430784 -24007696 - AluJb SINE Alu -22 290 1 425 100 0 114 chr17 61430803 61430873 -24007607 - AluJ/FLAM SINE Alu -249 63 2 785 199 28 38 chr17 61430885 61431036 -24007444 - L1MDa LINE L1 -4549 1991 1841 1992 121 31 10 chr17 61431036 61431325 -24007155 + AluSx SINE Alu 3 297 -15 785 199 28 38 chr17 61431325 61431384 -24007096 - L1MDa LINE L1 -4699 1841 1783 1731 201 142 25 chr17 61431451 61431895 -24006585 + MLT1D LTR MaLR 10 505 0 567 189 8 25 chr17 61431895 61432017 -24006463 - L1MDa LINE L1 -4993 1550 1431 1579 94 0 0 chr17 61432025 61432227 -24006253 - AluSq SINE Alu -8 305 104 381 295 13 67 chr17 61432435 61432497 -24005983 + L2 LINE L2 3132 3196 -76 1980 155 3 0 chr17 61432497 61432801 -24005679 - AluSx SINE Alu -7 305 1 381 295 13 67 chr17 61432801 61432887 -24005593 + L2 LINE L2 3196 3272 0 264 310 86 0 chr17 61432888 61433004 -24005476 + L2 LINE L2 1923 2048 -1266 1693 158 22 92 chr17 61433179 61433457 -24005023 + MER2 DNA MER2_type 1 250 -95 1993 110 4 0 chr17 61433457 61433721 -24004759 - AluSx SINE Alu -13 299 35 1693 158 22 92 chr17 61433721 61433802 -24004678 + MER2 DNA MER2_type 250 335 -10 1920 166 0 0 chr17 61433828 61434123 -24004357 + AluJb SINE Alu 1 295 -17 2247 116 0 0 chr17 61434131 61434425 -24004055 + AluSx SINE Alu 1 294 -18 530 188 111 21 chr17 61434436 61434580 -24003900 + L1MA10 LINE L1 6174 6330 -4 228 235 82 20 chr17 61435886 61435984 -24002496 - L1ME4a LINE L1 -88 6033 5930 1797 163 0 46 chr17 61436088 61436301 -24002179 + AluJb SINE Alu 1 197 -115 2466 45 14 0 chr17 61436301 61436593 -24001887 - AluY SINE Alu -15 296 1 1797 163 0 46 chr17 61436593 61436685 -24001795 + AluJb SINE Alu 197 292 -20 1318 197 47 25 chr17 61436819 61437139 -24001341 - L1ME3A LINE L1 0 6170 5844 2086 130 7 3 chr17 61437659 61437958 -24000522 - AluSx SINE Alu -7 305 6 652 96 48 0 chr17 61438138 61438242 -24000238 - Tigger2 DNA MER2_type -2412 306 198 3458 86 25 2 chr17 61438243 61438718 -23999762 + LTR15 LTR ERV1 1 486 -7 1235 113 31 21 chr17 61438729 61438867 -23999613 - Tigger2 DNA MER2_type -2522 196 54 2373 103 6 0 chr17 61438867 61439178 -23999302 + AluSp SINE Alu 1 313 0 1235 113 31 21 chr17 61439178 61439233 -23999247 - Tigger2 DNA MER2_type -2664 54 1 328 282 48 29 chr17 61439238 61439341 -23999139 + L1M4b LINE L1 17 121 -6738 1035 219 52 68 chr17 61439817 61440159 -23998321 + L1M4b LINE L1 642 1216 -5643 405 208 10 0 chr17 61440343 61440439 -23998041 + L1M4b LINE L1 1633 1729 -5126 22 35 0 0 chr17 61440439 61440468 -23998012 + AT_rich Low_complexity Low_complexity 1 29 0 2172 100 7 27 chr17 61440475 61440774 -23997706 + AluSx SINE Alu 1 293 -19 3064 199 44 48 chr17 61440777 61441373 -23997107 + L1ME2 LINE L1 5322 5916 -248 2050 132 0 20 chr17 61441373 61441676 -23996804 + AluSx SINE Alu 1 297 -15 3064 199 44 48 chr17 61441676 61441918 -23996562 + L1ME2 LINE L1 5916 6157 -7 390 230 10 10 chr17 61441912 61442012 -23996468 + L1MC4a LINE L1 6344 6443 -1365 * 932 212 50 101 chr17 61442004 61442085 -23996395 + L1MC4 LINE L1 7701 7785 -257 1814 174 0 10 chr17 61442085 61442383 -23996097 + AluJb SINE Alu 1 295 -17 932 212 50 101 chr17 61442383 61442659 -23995821 + L1MC4 LINE L1 7785 8040 -2 393 287 73 40 chr17 61442745 61442895 -23995585 - MIR3 SINE MIR -31 177 23 2269 114 10 0 chr17 61442923 61443231 -23995249 - AluSx SINE Alu -1 311 1 661 175 92 8 chr17 61443232 61443352 -23995128 - AluJo SINE Alu -178 134 5 1865 134 3 44 chr17 61443489 61443809 -23994671 + AluJb SINE Alu 2 308 -4 2104 110 34 0 chr17 61444248 61444540 -23993940 + AluSq SINE Alu 1 302 -11 2131 203 197 36 chr17 61444616 61444738 -23993742 + L1M4 LINE L1 4493 4594 -1552 2446 80 0 0 chr17 61444738 61445038 -23993442 + AluY SINE Alu 1 300 -11 2131 203 197 36 chr17 61445038 61445615 -23992865 + L1M4 LINE L1 4594 5305 -841 1288 94 6 0 chr17 61445618 61445789 -23992691 + AluSx SINE Alu 1 172 -140 1120 145 106 0 chr17 61445795 61446002 -23992478 + L1MC2 LINE L1 6111 6339 -5 922 127 0 8 chr17 61446015 61446149 -23992331 - AluSq/x SINE Alu -180 133 1 1663 125 0 0 chr17 61446490 61446714 -23991766 + AluSx SINE Alu 1 224 -88 2056 132 0 3 chr17 61446733 61447020 -23991460 + AluSq SINE Alu 11 296 -17 1749 153 3 29 chr17 61447055 61447369 -23991111 - AluJb SINE Alu 0 312 7 248 340 85 0 chr17 61447424 61447518 -23990962 + L2 LINE L2 3206 3307 -6 2390 87 0 13 chr17 61447557 61447867 -23990613 - AluY SINE Alu -5 306 1 2174 107 3 3 chr17 61448529 61448820 -23989660 - AluSx SINE Alu -21 291 1 2306 104 0 0 chr17 61448847 61449144 -23989336 - AluSx SINE Alu -15 297 1 528 256 25 44 chr17 61449186 61449389 -23989091 - L1MC4 LINE L1 -96 7946 7748 23 0 0 0 chr17 61449598 61449621 -23988859 + AT_rich Low_complexity Low_complexity 1 23 0 835 197 0 0 chr17 61449624 61449756 -23988724 + FLAM_C SINE Alu 1 132 -1 668 324 145 62 chr17 61449796 61449840 -23988640 - L3 LINE CR1 -225 1352 1313 995 192 131 0 chr17 61449840 61450038 -23988442 - MER58A DNA MER1_type 0 224 1 668 324 145 62 chr17 61450038 61450371 -23988109 - L3 LINE CR1 -264 1313 1009 2465 65 0 0 chr17 61450371 61450663 -23987817 - AluY SINE Alu -19 292 1 668 324 145 62 chr17 61450663 61451141 -23987339 - L3 LINE CR1 -568 1009 425 1093 142 0 0 chr17 61451231 61451386 -23987094 + AluSg/x SINE Alu 132 286 -24 460 316 48 19 chr17 61451474 61451683 -23986797 - L3 LINE CR1 -1292 285 71 206 356 0 0 chr17 61452134 61452193 -23986287 - L3 LINE CR1 -1325 252 194 2107 97 53 7 chr17 61452468 61452767 -23985713 - AluSq SINE Alu 0 313 1 1942 164 0 0 chr17 61453155 61453459 -23985021 - AluSx SINE Alu -8 304 1 1517 186 25 11 chr17 61453462 61453747 -23984733 - AluJb SINE Alu -23 289 1 2450 96 0 0 chr17 61453917 61454229 -23984251 + AluSx SINE Alu 1 312 0 1476 177 9 65 chr17 61454856 61455432 -23983048 + L1ME3A LINE L1 5444 5948 -226 1107 205 31 9 chr17 61455478 61455702 -23982778 + L1MB5 LINE L1 5945 6173 -1 978 188 24 18 chr17 61456499 61456669 -23981811 + FAM SINE Alu 1 171 -4 2414 73 0 0 chr17 61457082 61457384 -23981096 + AluY SINE Alu 1 302 -9 2004 129 0 39 chr17 61458048 61458358 -23980122 + AluSq SINE Alu 1 298 -15 379 242 61 38 chr17 61458606 61458738 -23979742 + L1ME3A LINE L1 6031 6165 -5 21 0 0 0 chr17 61458950 61458971 -23979509 + AT_rich Low_complexity Low_complexity 1 21 0 1694 153 39 14 chr17 61460609 61460891 -23977589 + AluJo SINE Alu 1 289 -23 28 0 0 0 chr17 61460962 61460990 -23977490 + AT_rich Low_complexity Low_complexity 1 28 0 333 122 20 0 chr17 61461459 61461508 -23976972 + 5S rRNA rRNA 1 50 -71 1689 154 0 4 chr17 61461534 61461794 -23976686 + AluJb SINE Alu 7 265 -47 1702 167 3 10 chr17 61462403 61462703 -23975777 + AluJo SINE Alu 1 298 -14 901 207 78 21 chr17 61462990 61463232 -23975248 - L1ME3 LINE L1 -20 6142 5887 215 36 0 0 chr17 61463647 61463675 -23974805 - MIR SINE MIR -112 150 123 415 302 34 13 chr17 61464264 61464413 -23974067 + MIR SINE MIR 47 198 -64 553 192 25 8 chr17 61464435 61464555 -23973925 + MER20 DNA MER1_type 98 219 0 539 268 145 4 chr17 61464618 61464853 -23973627 - MER113 DNA MER1_type? -234 287 20 340 275 0 42 chr17 61465277 61465397 -23973083 + L2 LINE L2 2458 2572 -742 192 381 10 0 chr17 61465856 61465953 -23972527 + L2 LINE L2 3159 3256 -16 508 248 29 105 chr17 61466286 61466458 -23972022 + L1MD3 LINE L1 7705 7844 -151 1678 154 0 27 chr17 61466458 61466757 -23971723 - AluJo SINE Alu -21 291 1 508 248 29 105 chr17 61466757 61466899 -23971581 + L1MD3 LINE L1 7844 7995 0 1019 327 35 18 chr17 61472076 61472731 -23965749 - L1MC3 LINE L1 -1629 6156 5491 182 272 48 96 chr17 61477334 61477459 -23961021 - MIR SINE MIR -72 136 18 * 212 326 82 61 chr17 61477439 61477586 -23960894 + MIR SINE MIR 94 243 -19 1835 192 21 3 chr17 61478660 61478998 -23959482 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 61479077 61479102 -23959378 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1386 191 103 21 chr17 61479452 61479792 -23958688 - THE1C LTR MaLR 0 375 8 183 80 0 0 chr17 61480341 61480366 -23958114 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 221 222 0 0 chr17 61480852 61480897 -23957583 + C-rich Low_complexity Low_complexity 4 48 0 450 262 12 30 chr17 61481196 61481364 -23957116 + GA-rich Low_complexity Low_complexity 2 166 0 2006 123 3 0 chr17 61481842 61482164 -23956316 + AluSp SINE Alu 1 323 0 360 133 0 0 chr17 61482206 61482266 -23956214 + (TG)n Simple_repeat Simple_repeat 2 61 0 3094 131 12 8 chr17 61482465 61482946 -23955534 - MER1A DNA MER1_type 0 529 47 882 180 22 27 chr17 61483141 61483346 -23955134 - MLT1C LTR MaLR 0 467 207 232 130 65 0 chr17 61483346 61483392 -23955088 + MLT-int LTR MaLR 143 191 -1544 198 71 0 0 chr17 61484022 61484050 -23954430 + (TG)n Simple_repeat Simple_repeat 1 28 0 180 152 0 0 chr17 61484091 61484124 -23954356 + (TG)n Simple_repeat Simple_repeat 2 34 0 217 146 42 21 chr17 61485376 61485424 -23953056 + (CTGGGG)n Simple_repeat Simple_repeat 3 51 0 238 264 56 0 chr17 61486419 61486491 -23951989 + MIR SINE MIR 117 192 -70 1442 177 31 74 chr17 61486518 61486588 -23951892 - L1MB2 LINE L1 -1 6170 6098 216 0 0 0 chr17 61486588 61486612 -23951868 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 1442 177 31 74 chr17 61486612 61486931 -23951549 - L1MB2 LINE L1 -73 6098 5798 221 0 35 0 chr17 61488082 61488111 -23950369 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1542 139 104 0 chr17 61488116 61488375 -23950105 - AluJo SINE Alu -26 286 1 508 233 8 23 chr17 61489794 61489923 -23948557 + MER103 DNA DNA 38 164 -2 2187 184 34 36 chr17 61490856 61491362 -23947118 - MLT1D LTR MaLR 0 505 1 425 273 40 11 chr17 61492016 61492192 -23946288 + L1ME4a LINE L1 5939 6119 -2 831 135 23 8 chr17 61492250 61492383 -23946097 + AluJo SINE Alu 3 137 -175 32 0 0 0 chr17 61492383 61492415 -23946065 + AT_rich Low_complexity Low_complexity 1 32 0 1862 141 3 13 chr17 61492638 61492937 -23945543 - AluJo SINE Alu -16 296 1 189 264 57 0 chr17 61493048 61493101 -23945379 + MER5A DNA MER1_type 130 185 -4 688 182 71 47 chr17 61493124 61493294 -23945186 + MER5B DNA MER1_type 2 175 -3 243 79 0 0 chr17 61493832 61493870 -23944610 + (GA)n Simple_repeat Simple_repeat 1 38 0 626 218 66 20 chr17 61494016 61494213 -23944267 - L1ME1 LINE L1 -97 6069 5864 * 2030 231 142 37 chr17 61494212 61494604 -23943876 - L1MEc LINE L1 -3018 3388 3039 1831 152 3 3 chr17 61494604 61494900 -23943580 + AluJb SINE Alu 1 296 -16 2030 231 142 37 chr17 61494900 61495639 -23942841 - L1MEc LINE L1 -3367 3039 2177 913 91 8 8 chr17 61495639 61495771 -23942709 + AluSp SINE Alu 81 212 -101 584 311 18 31 chr17 61495781 61496006 -23942474 - L1MEc LINE L1 -5414 995 774 1025 156 6 0 chr17 61496969 61497129 -23941351 + AluSg/x SINE Alu 131 291 -21 300 296 117 6 chr17 61497145 61497462 -23941018 - L1M4 LINE L1 -1529 4617 4266 274 324 87 5 chr17 61497740 61497947 -23940533 - L1M4 LINE L1 -2136 4010 3787 285 309 201 5 chr17 61498322 61498516 -23939964 - MIR SINE MIR -7 255 24 720 226 126 0 chr17 61498862 61499052 -23939428 - MIR SINE MIR -3 259 46 1594 158 37 24 chr17 61499216 61499513 -23938967 - AluJb SINE Alu -11 301 1 480 337 58 0 chr17 61503120 61503292 -23935188 - MER91A DNA MER1_type -1 195 14 397 202 217 8 chr17 61504337 61504466 -23934014 - L1ME4a LINE L1 -3 6118 5963 282 265 61 61 chr17 61504474 61504704 -23933776 - L1ME4a LINE L1 -201 5920 5691 22 0 0 0 chr17 61505166 61505188 -23933292 + AT_rich Low_complexity Low_complexity 1 22 0 215 315 174 20 chr17 61505188 61505337 -23933143 - MIR3 SINE MIR -21 187 16 353 218 28 134 chr17 61505346 61505488 -23932992 - MER5B DNA MER1_type -7 171 45 466 262 126 39 chr17 61505499 61505705 -23932775 - MIR SINE MIR -19 243 20 21 71 0 0 chr17 61505767 61505809 -23932671 + AT_rich Low_complexity Low_complexity 1 42 0 554 285 92 95 chr17 61506178 61506568 -23931912 + L1ME4a LINE L1 5505 5893 -228 197 222 93 0 chr17 61507641 61507695 -23930785 - L2 LINE L2 0 3272 3214 24 0 0 0 chr17 61507695 61507719 -23930761 + AT_rich Low_complexity Low_complexity 1 24 0 383 0 21 0 chr17 61507720 61507767 -23930713 + (TA)n Simple_repeat Simple_repeat 2 49 0 306 0 0 0 chr17 61507870 61507904 -23930576 + (TG)n Simple_repeat Simple_repeat 2 35 0 1745 158 0 7 chr17 61507904 61508177 -23930303 - AluJb SINE Alu -39 273 1 1870 191 11 22 chr17 61508790 61509151 -23929329 + MLT1A1 LTR MaLR 9 365 0 239 269 191 3 chr17 61509216 61509340 -23929140 - MIR SINE MIR -65 143 3 498 307 87 14 chr17 61510029 61510247 -23928233 - MIR SINE MIR -20 242 9 223 367 11 0 chr17 61510238 61510328 -23928152 + MIR SINE MIR 159 249 -13 * 2740 192 18 36 chr17 61510610 61511158 -23927322 + MLT1F LTR MaLR 2 539 -3 256 325 26 35 chr17 61511179 61511293 -23927187 - MIR SINE MIR -122 140 28 2354 180 52 0 chr17 61511757 61512162 -23926318 + MSTB LTR MaLR 1 426 0 7805 170 117 1 chr17 61512162 61513642 -23924838 + MSTB-int LTR MaLR 1 1651 0 2023 180 46 0 chr17 61513642 61513992 -23924488 + MSTB LTR MaLR 1 366 -60 208 254 0 45 chr17 61514771 61514838 -23923642 + A-rich Low_complexity Low_complexity 3 66 0 255 324 131 21 chr17 61515203 61515348 -23923132 - MIR SINE MIR -70 192 32 191 254 91 0 chr17 61515727 61515782 -23922698 - MIR SINE MIR -79 183 124 408 248 34 133 chr17 61516250 61516544 -23921936 + L1MC5 LINE L1 7311 7575 -386 2318 198 63 0 chr17 61516585 61517100 -23921380 - L1M4 LINE L1 -1194 4952 4406 193 340 29 19 chr17 61517238 61517341 -23921139 + MIR3 SINE MIR 53 156 -52 368 273 148 6 chr17 61517344 61517520 -23920960 - MIR SINE MIR -57 205 5 203 204 19 0 chr17 61517790 61517844 -23920636 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1118 138 12 0 chr17 61519025 61519192 -23919288 - FRAM SINE Alu -10 166 1 1593 160 91 22 chr17 61520236 61520554 -23917926 - MER58B DNA MER1_type 0 341 2 2539 68 30 3 chr17 61521483 61521821 -23916659 + THE1A LTR MaLR 1 347 -8 2016 119 14 0 chr17 61522775 61523081 -23915399 + AluSp SINE Alu 1 310 0 240 274 74 0 chr17 61524482 61524577 -23913903 - L1ME LINE L1 -201 5920 5819 511 289 98 20 chr17 61574730 61574934 -23863546 - MIR SINE MIR -34 228 9 217 321 36 36 chr17 61574925 61575009 -23863471 + MIR SINE MIR 159 242 -20 * 2792 192 18 36 chr17 61575297 61575845 -23862635 + MLT1F LTR MaLR 2 539 -3 274 325 26 35 chr17 61575866 61575980 -23862500 - MIR SINE MIR -122 140 28 187 238 113 50 chr17 61576333 61576413 -23862067 - MIR SINE MIR -55 207 123 2396 178 52 0 chr17 61576444 61576849 -23861631 + MSTB LTR MaLR 1 426 0 7946 170 117 1 chr17 61576849 61578329 -23860151 + MSTB-int LTR MaLR 1 1651 0 2050 180 46 0 chr17 61578329 61578679 -23859801 + MSTB LTR MaLR 1 366 -60 208 254 0 45 chr17 61579458 61579525 -23858955 + A-rich Low_complexity Low_complexity 3 66 0 264 324 131 21 chr17 61579890 61580035 -23858445 - MIR SINE MIR -70 192 32 189 236 91 0 chr17 61580414 61580469 -23858011 - MIR SINE MIR -79 183 124 430 245 37 136 chr17 61580937 61581231 -23857249 + L1MC5 LINE L1 7311 7575 -386 2421 196 63 0 chr17 61581276 61581787 -23856693 - L1M4 LINE L1 -1198 4948 4406 188 340 29 19 chr17 61581925 61582028 -23856452 + MIR3 SINE MIR 53 156 -52 363 273 148 6 chr17 61582031 61582207 -23856273 - MIR SINE MIR -57 205 5 203 204 19 0 chr17 61582477 61582531 -23855949 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1123 138 12 0 chr17 61583712 61583879 -23854601 - FRAM SINE Alu -10 166 1 1736 160 91 22 chr17 61584923 61585241 -23853239 - MER58B DNA MER1_type 0 341 2 2579 68 30 3 chr17 61586170 61586508 -23851972 + THE1A LTR MaLR 1 347 -8 2028 119 14 0 chr17 61587462 61587768 -23850712 + AluSp SINE Alu 1 310 0 260 263 74 0 chr17 61589169 61589264 -23849216 - L1ME4a LINE L1 -201 5920 5819 297 216 0 54 chr17 61590133 61590207 -23848273 - L2 LINE L2 0 3272 3203 349 347 33 0 chr17 61590284 61590405 -23848075 - L2 LINE L2 -216 3056 2932 2798 10 0 3 chr17 61590423 61590731 -23847749 + AluYa5 SINE Alu 1 307 -4 254 274 29 20 chr17 61591428 61591530 -23846950 + MIR SINE MIR 78 180 -82 605 259 12 24 chr17 61591537 61591707 -23846773 - MER105 DNA DNA -1 203 36 326 350 115 60 chr17 61591898 61592455 -23846025 + L2 LINE L2 2682 3272 0 914 182 103 65 chr17 61592655 61592869 -23845611 + MER58A DNA MER1_type 3 224 0 21 0 0 0 chr17 61593546 61593567 -23844913 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 61593585 61593620 -23844860 + AT_rich Low_complexity Low_complexity 1 35 0 389 261 54 8 chr17 61594886 61595016 -23843464 - MIR SINE MIR -49 213 78 344 296 279 17 chr17 61596970 61597149 -23841331 - MIR SINE MIR -21 241 16 267 265 44 0 chr17 61598004 61598072 -23840408 + MLT1L LTR MaLR 1 71 -544 1223 161 50 0 chr17 61598138 61598337 -23840143 + MER20 DNA MER1_type 11 219 0 259 157 39 57 chr17 61598346 61598430 -23840050 - MER5B DNA MER1_type -11 167 2 439 303 123 51 chr17 61598436 61598868 -23839612 + MLT1L LTR MaLR 153 615 0 1326 88 18 0 chr17 61599127 61599298 -23839182 + AluY SINE Alu 130 303 -8 1790 159 25 32 chr17 61599856 61600170 -23838310 + AluJo SINE Alu 1 312 0 21 0 0 0 chr17 61600378 61600399 -23838081 + AT_rich Low_complexity Low_complexity 1 21 0 683 297 100 56 chr17 61600458 61600849 -23837631 - L2 LINE L2 -24 3248 2841 2486 41 0 50 chr17 61602537 61602857 -23835623 + AluY SINE Alu 1 304 -7 478 253 160 13 chr17 61603041 61603191 -23835289 + MLT1J LTR MaLR 2 173 -338 216 264 19 0 chr17 61603747 61603800 -23834680 + (TG)n Simple_repeat Simple_repeat 2 55 0 545 296 25 25 chr17 61605039 61605235 -23833245 + L2 LINE L2 3118 3313 0 306 295 57 8 chr17 61605348 61605470 -23833010 - MIR SINE MIR -95 167 40 3198 135 30 70 chr17 61605661 61605742 -23832738 + MER44D DNA MER2_type 2 85 -2402 2101 112 7 10 chr17 61605742 61606045 -23832435 + AluSx SINE Alu 2 303 -9 3198 135 30 70 chr17 61606045 61606535 -23831945 + MER44D DNA MER2_type 85 605 0 367 288 293 0 chr17 61606550 61606748 -23831732 - MIR SINE MIR -5 257 2 241 310 203 6 chr17 61606788 61606946 -23831534 + MIR SINE MIR 63 251 -11 330 284 137 40 chr17 61607556 61607602 -23830878 + L1ME4a LINE L1 5569 5609 -512 2276 93 3 7 chr17 61607602 61607912 -23830568 - AluY SINE Alu -2 309 1 330 284 137 40 chr17 61607912 61608309 -23830171 + L1ME4a LINE L1 5609 6055 -66 261 281 157 15 chr17 61608982 61609130 -23829350 - MIR SINE MIR -63 145 16 457 279 62 11 chr17 61609433 61609612 -23828868 + MER117 DNA MER1_type 1 188 -9 1635 163 40 47 chr17 61609925 61610225 -23828255 + AluJo SINE Alu 1 298 -14 958 118 0 22 chr17 61611978 61612114 -23826366 + FLAM_C SINE Alu 1 133 0 222 254 45 30 chr17 61612231 61612298 -23826182 - L2 LINE L2 0 3272 3205 202 270 79 0 chr17 61613210 61613273 -23825207 + L2 LINE L2 2991 3058 -214 318 277 197 0 chr17 61613527 61613664 -23824816 - MIR SINE MIR -98 164 1 630 255 85 9 chr17 61613974 61614186 -23824294 + MIR SINE MIR 3 230 -32 364 315 22 0 chr17 61614601 61614690 -23823790 + MIR SINE MIR 19 109 -153 965 225 52 55 chr17 61615734 61616059 -23822421 + MLT1J2 LTR MaLR 2 325 -125 5030 51 18 2 chr17 61616224 61617240 -23821240 - MER11A LTR ERVK 0 1266 1 264 267 89 11 chr17 61617240 61617311 -23821169 + MLT1J2 LTR MaLR 490 567 0 2720 137 59 30 chr17 61617491 61617583 -23820897 + LTR47A LTR ERVL 1 89 -363 2261 93 0 17 chr17 61617583 61617884 -23820596 + AluY SINE Alu 1 296 -15 2720 137 59 30 chr17 61617884 61618230 -23820250 + LTR47A LTR ERVL 89 452 0 28 0 0 0 chr17 61618866 61618894 -23819586 + AT_rich Low_complexity Low_complexity 1 28 0 341 341 24 8 chr17 61619056 61619179 -23819301 - MIR SINE MIR -115 147 23 190 118 0 0 chr17 61620028 61620062 -23818418 - MIR SINE MIR -106 156 123 474 284 34 14 chr17 61620649 61620797 -23817683 + MIR SINE MIR 47 197 -65 471 242 17 0 chr17 61620820 61620940 -23817540 + MER20 DNA MER1_type 98 219 0 481 294 20 14 chr17 61620950 61621096 -23817384 + MIR SINE MIR 20 166 -96 320 194 0 0 chr17 61621096 61621160 -23817320 + L1ME1 LINE L1 4822 4885 -1261 278 94 38 0 chr17 61621160 61621213 -23817267 + MER41B LTR ERV1 499 553 -82 4158 164 42 24 chr17 61621220 61622502 -23815978 + L1MA9 LINE L1 4873 6290 -22 21 0 0 0 chr17 61626098 61626119 -23812361 + GC_rich Low_complexity Low_complexity 1 21 0 274 221 80 80 chr17 61626320 61626433 -23812047 + L1ME1 LINE L1 5572 5684 -437 711 161 25 81 chr17 61626492 61626612 -23811868 + MER58B DNA MER1_type 190 300 -2120 2448 65 0 29 chr17 61626612 61626922 -23811558 - AluY SINE Alu -10 301 1 711 161 25 81 chr17 61626922 61626962 -23811518 + MER58B DNA MER1_type 300 341 0 736 249 109 23 chr17 61628218 61628439 -23810041 + MIR SINE MIR 9 248 -14 623 290 104 42 chr17 61628514 61628869 -23809611 + L1ME4a LINE L1 5575 5951 -170 504 293 104 0 chr17 61628929 61629093 -23809387 + MIR SINE MIR 63 243 -19 1830 124 3 35 chr17 61629224 61629506 -23808974 - AluSx SINE Alu -10 302 30 271 279 106 72 chr17 61630145 61630299 -23808181 + MIR3 SINE MIR 2 161 -63 414 372 41 0 chr17 61630365 61630537 -23807943 + MER91A DNA MER1_type 1 179 -17 280 264 69 0 chr17 61630546 61630618 -23807862 + MER91A DNA MER1_type 119 195 -1 467 304 175 0 chr17 61632667 61632884 -23805596 + MIR SINE MIR 3 257 -5 364 322 45 36 chr17 61632927 61633271 -23805209 + L1MC4a LINE L1 5575 5936 -185 420 316 38 8 chr17 61633331 61633464 -23805016 + MIR SINE MIR 40 176 -86 2211 138 0 0 chr17 61633479 61633791 -23804689 - AluSx SINE Alu 0 312 1 274 279 9 45 chr17 61634202 61634313 -23804167 - MIR SINE MIR -140 122 16 539 270 11 11 chr17 61634316 61634494 -23803986 + L1M4 LINE L1 2951 3128 -3018 * 591 218 66 20 chr17 61634493 61634690 -23803790 + L1ME1 LINE L1 5864 6069 -97 297 68 0 0 chr17 61634836 61634880 -23803600 + (TC)n Simple_repeat Simple_repeat 1 44 0 667 182 71 47 chr17 61635419 61635589 -23802891 - MER5B DNA MER1_type -3 175 2 199 264 57 0 chr17 61635612 61635665 -23802815 - MER5A DNA MER1_type -4 185 130 1919 151 3 13 chr17 61635776 61636075 -23802405 + AluJo SINE Alu 1 296 -16 32 0 0 0 chr17 61636298 61636330 -23802150 + AT_rich Low_complexity Low_complexity 1 32 0 847 136 0 8 chr17 61636341 61636473 -23802007 - FLAM_C SINE Alu 0 133 3 423 268 39 17 chr17 61636528 61636707 -23801773 - L1ME4a LINE L1 0 6121 5939 2084 182 34 36 chr17 61637360 61637866 -23800614 + MLT1D LTR MaLR 1 505 0 482 233 8 23 chr17 61638795 61638924 -23799556 - MER103 DNA DNA -2 164 38 1640 139 104 0 chr17 61640343 61640602 -23797878 + AluJo SINE Alu 1 286 -26 221 0 35 0 chr17 61640607 61640636 -23797844 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1392 177 31 74 chr17 61641785 61642104 -23796376 + L1MB2 LINE L1 5798 6098 -73 216 0 0 0 chr17 61642104 61642128 -23796352 + (TGGG)n Simple_repeat Simple_repeat 1 24 0 1392 177 31 74 chr17 61642128 61642198 -23796282 + L1MB2 LINE L1 6098 6170 -1 245 250 56 0 chr17 61642225 61642297 -23796183 - MIR SINE MIR -70 192 117 217 146 42 21 chr17 61643913 61643961 -23794519 + (CCCCAG)n Simple_repeat Simple_repeat 3 51 0 180 152 0 0 chr17 61645213 61645246 -23793234 + (CA)n Simple_repeat Simple_repeat 2 34 0 198 71 0 0 chr17 61645287 61645315 -23793165 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 88 0 0 chr17 61645957 61645991 -23792489 - MLT-int LTR MaLR -1559 176 143 848 180 22 27 chr17 61645991 61646196 -23792284 + MLT1C LTR MaLR 207 467 0 3033 131 12 8 chr17 61646391 61646872 -23791608 + MER1A DNA MER1_type 47 529 0 360 133 0 0 chr17 61647071 61647131 -23791349 + (CA)n Simple_repeat Simple_repeat 2 61 0 2122 123 3 0 chr17 61647173 61647495 -23790985 - AluSp SINE Alu 0 323 1 450 262 12 30 chr17 61647973 61648141 -23790339 + CT-rich Low_complexity Low_complexity 2 166 0 221 222 0 0 chr17 61648440 61648485 -23789995 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 61648971 61648996 -23789484 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1322 182 112 29 chr17 61649545 61649885 -23788595 + THE1C LTR MaLR 8 375 0 183 80 0 0 chr17 61650235 61650260 -23788220 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1754 195 21 3 chr17 61650339 61650677 -23787803 + MER2 DNA MER2_type 1 344 0 536 216 40 0 chr17 61651395 61651520 -23786960 - LTR65 LTR ERV1 -535 134 5 424 296 30 40 chr17 61651685 61651884 -23786596 - L2 LINE L2 -182 3090 2894 1915 143 0 0 chr17 61652079 61652351 -23786129 + AluJb SINE Alu 1 272 -40 761 48 0 10 chr17 61652352 61652455 -23786025 + (GGAA)n Simple_repeat Simple_repeat 4 105 0 666 235 29 85 chr17 61653135 61653407 -23785073 + MER90 LTR ERV1 1 257 -318 303 185 0 0 chr17 61653411 61653476 -23785004 - L1MB8 LINE L1 -2 6176 6112 1587 148 105 22 chr17 61653477 61653604 -23784876 + AluJo SINE Alu 11 126 -186 1510 149 4 8 chr17 61653604 61653839 -23784641 + AluSx SINE Alu 60 293 -19 1587 148 105 22 chr17 61653839 61653988 -23784492 + AluJo SINE Alu 126 310 -2 729 135 0 35 chr17 61653996 61654137 -23784343 + L1PA15 LINE L1 6024 6159 -6 2534 112 50 16 chr17 61654186 61654623 -23783857 - L1MA3 LINE L1 0 6305 5854 2349 85 14 0 chr17 61654760 61655055 -23783425 - AluSp SINE Alu -14 299 1 224 248 238 9 chr17 61655211 61655316 -23783164 - MIR SINE MIR -17 245 117 2112 125 6 67 chr17 61655662 61656021 -23782459 - MER1B DNA MER1_type 0 337 1 2347 93 0 3 chr17 61658609 61658909 -23779571 - AluSc SINE Alu -10 299 1 2306 95 0 29 chr17 61658968 61659274 -23779206 - AluSx SINE Alu -15 297 1 1562 172 51 18 chr17 61659791 61660111 -23778369 - AluJb SINE Alu 0 331 3 250 255 51 71 chr17 61661041 61661139 -23777341 - MIR SINE MIR -5 257 162 447 153 38 99 chr17 61661141 61661272 -23777208 - Charlie1 DNA MER1_type -9 2752 2630 626 212 71 60 chr17 61661282 61661420 -23777060 - Charlie1 DNA MER1_type -2544 217 75 2090 134 0 28 chr17 61661420 61661741 -23776739 + AluJb SINE Alu 1 312 0 626 212 71 60 chr17 61661741 61661786 -23776694 - Charlie1 DNA MER1_type -2686 75 32 376 304 160 28 chr17 61661827 61662008 -23776472 - MIR SINE MIR -24 238 34 378 255 0 0 chr17 61662817 61662923 -23775557 + L1ME2 LINE L1 6053 6158 -6 2367 89 0 10 chr17 61662943 61663063 -23775417 + AluY SINE Alu 1 121 -190 243 0 0 0 chr17 61663063 61663090 -23775390 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2367 89 0 10 chr17 61663090 61663271 -23775209 + AluY SINE Alu 121 299 -12 2278 123 0 3 chr17 61663466 61663767 -23774713 + AluSx SINE Alu 1 300 -12 1797 167 44 14 chr17 61664717 61665010 -23773470 + AluJb SINE Alu 1 302 -10 2859 121 17 36 chr17 61665984 61666389 -23772091 - L1P4 LINE L1 -387 5774 5363 2140 130 0 13 chr17 61666389 61666689 -23771791 - AluSx SINE Alu -16 296 1 2859 121 17 36 chr17 61666689 61666709 -23771771 - L1P4 LINE L1 -798 5363 5344 2510 74 3 0 chr17 61666709 61667008 -23771472 - AluSp SINE Alu -13 300 1 2859 121 17 36 chr17 61667008 61667221 -23771259 - L1P4 LINE L1 -817 5344 5142 235 183 0 135 chr17 61667227 61667331 -23771149 - L1MB7 LINE L1 -118 6066 5977 518 157 37 74 chr17 61667331 61667439 -23771041 - AluJo SINE Alu -126 186 83 374 259 52 28 chr17 61667698 61667839 -23770641 + MIR SINE MIR 19 164 -65 2430 91 3 0 chr17 61668232 61668540 -23769940 + AluSp SINE Alu 2 310 -3 814 142 8 0 chr17 61669019 61669146 -23769334 + AluSg/x SINE Alu 174 301 -9 2354 109 0 0 chr17 61669146 61669450 -23769030 + AluSx SINE Alu 1 304 -8 2008 139 21 15 chr17 61669451 61669789 -23768691 - THE1C LTR MaLR -35 340 1 203 300 43 14 chr17 61670399 61670469 -23768011 - L2 LINE L2 -557 2757 2686 271 334 84 48 chr17 61671256 61671402 -23767078 + MIR3 SINE MIR 20 177 -31 228 310 70 0 chr17 61671581 61671681 -23766799 - L2 LINE L2 -2 3311 3205 466 282 102 32 chr17 61672175 61672391 -23766089 + MIR SINE MIR 32 262 0 1930 123 7 17 chr17 61672763 61673065 -23765415 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr17 61673425 61673455 -23765025 + AT_rich Low_complexity Low_complexity 1 30 0 1546 173 7 40 chr17 61673455 61673756 -23764724 - AluJo SINE Alu -21 291 1 23 33 0 0 chr17 61674621 61674651 -23763829 + AT_rich Low_complexity Low_complexity 1 30 0 1374 198 7 30 chr17 61674651 61674949 -23763531 - AluJo SINE Alu -21 291 1 1871 141 26 3 chr17 61677045 61677350 -23761130 + AluJo SINE Alu 1 312 0 1010 152 42 26 chr17 61678420 61678438 -23760042 + AluSg/x SINE Alu 119 135 -177 2142 106 0 6 chr17 61678438 61678749 -23759731 + AluSx SINE Alu 1 309 -3 1010 152 42 26 chr17 61678749 61678921 -23759559 + AluSg/x SINE Alu 135 312 0 315 258 167 0 chr17 61680147 61680267 -23758213 + L1ME4a LINE L1 5982 6121 0 225 0 0 0 chr17 61680271 61680296 -23758184 + (CA)n Simple_repeat Simple_repeat 1 25 0 240 130 0 0 chr17 61680307 61680353 -23758127 + (TTCC)n Simple_repeat Simple_repeat 4 49 0 2158 119 0 10 chr17 61680353 61680665 -23757815 - AluSx SINE Alu 0 312 4 899 85 28 23 chr17 61680671 61680847 -23757633 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 1658 168 3 44 chr17 61680862 61681183 -23757297 - AluJo SINE Alu -4 308 1 1654 168 3 38 chr17 61681212 61681527 -23756953 - AluJb SINE Alu 0 312 9 473 255 34 20 chr17 61682350 61682499 -23755981 + MIR3 SINE MIR 18 168 -40 329 304 48 36 chr17 61682649 61682817 -23755663 + L2 LINE L2 2921 3090 -182 2169 116 3 3 chr17 61682969 61683280 -23755200 - AluSx SINE Alu 0 312 2 294 330 17 8 chr17 61683825 61683943 -23754537 - MIR SINE MIR -31 231 113 318 305 19 9 chr17 61684219 61684324 -23754156 - MIR SINE MIR -109 153 48 237 65 0 0 chr17 61686051 61686082 -23752398 + (CCCCCA)n Simple_repeat Simple_repeat 3 33 0 1898 98 59 0 chr17 61686893 61687179 -23751301 + AluSx SINE Alu 1 303 -9 220 279 186 14 chr17 61687985 61688125 -23750355 + MIR SINE MIR 62 225 -37 3166 144 79 12 chr17 61689309 61689544 -23748936 + MER41C LTR ERV1 1 219 -335 2155 115 0 0 chr17 61689544 61689840 -23748640 + AluSx SINE Alu 1 296 -16 3166 144 79 12 chr17 61689840 61690123 -23748357 + MER41C LTR ERV1 219 554 0 470 257 29 29 chr17 61690799 61690939 -23747541 - MIR SINE MIR -70 192 53 865 169 34 0 chr17 61690979 61691127 -23747353 - L1MC2 LINE L1 0 6344 6192 258 32 0 0 chr17 61691982 61692013 -23746467 + (CA)n Simple_repeat Simple_repeat 1 31 0 737 140 6 0 chr17 61692030 61692194 -23746286 + (CA)n Simple_repeat Simple_repeat 1 165 0 301 252 53 38 chr17 61693401 61693532 -23744948 - L2 LINE L2 -283 2989 2857 235 269 0 15 chr17 61695189 61695256 -23743224 - L2 LINE L2 -56 3257 3192 906 175 66 44 chr17 61695259 61695442 -23743038 + MER5A DNA MER1_type 1 187 -2 199 333 79 0 chr17 61695548 61695674 -23742806 - MIR SINE MIR -56 206 71 224 316 76 0 chr17 61696263 61696342 -23742138 - MIR3 SINE MIR -21 187 103 1827 147 0 0 chr17 61696345 61696618 -23741862 + AluJb SINE Alu 1 273 -39 388 212 161 25 chr17 61696773 61696891 -23741589 - L2 LINE L2 -1 3271 3138 1974 117 45 0 chr17 61696969 61697260 -23741220 + AluSx SINE Alu 1 304 -8 200 221 0 15 chr17 61697384 61697452 -23741028 + G-rich Low_complexity Low_complexity 4 70 0 378 0 0 0 chr17 61699030 61699072 -23739408 + (CA)n Simple_repeat Simple_repeat 2 43 0 1566 163 78 0 chr17 61700332 61700615 -23737865 + AluJo SINE Alu 1 305 -7 662 199 10 0 chr17 61700621 61700810 -23737670 + CT-rich Low_complexity Low_complexity 1 190 0 183 42 0 0 chr17 61700837 61700861 -23737619 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 2070 119 13 10 chr17 61700864 61701174 -23737306 - AluSx SINE Alu -1 311 1 609 288 12 6 chr17 61701350 61701520 -23736960 + MIR SINE MIR 22 192 -70 200 214 0 0 chr17 61702112 61702154 -23736326 + (TCTCTG)n Simple_repeat Simple_repeat 3 44 0 772 210 5 21 chr17 61702258 61702444 -23736036 - MER53 DNA DNA -6 183 1 1156 144 5 5 chr17 61702702 61702889 -23735591 - AluSq SINE Alu -123 190 4 406 245 24 4 chr17 61702895 61703013 -23735467 - L1ME LINE L1 -451 5670 5543 370 306 104 21 chr17 61703035 61703157 -23735323 - MIR SINE MIR -52 210 65 2142 105 3 22 chr17 61703157 61703472 -23735008 + AluSx SINE Alu 1 309 -3 370 306 104 21 chr17 61703472 61703542 -23734938 - MIR SINE MIR -197 65 2 264 248 80 53 chr17 61703547 61703660 -23734820 - MIR SINE MIR -94 114 8 2180 98 0 14 chr17 61705448 61705744 -23732736 + AluSx SINE Alu 3 294 -18 267 31 0 0 chr17 61705744 61705776 -23732704 + (CAG)n Simple_repeat Simple_repeat 2 33 0 2156 101 0 7 chr17 61705973 61706269 -23732211 - AluSc SINE Alu -15 294 1 216 341 61 49 chr17 61707218 61707382 -23731098 - MIR SINE MIR -50 212 47 545 289 51 10 chr17 61707416 61707613 -23730867 + MIR SINE MIR 47 251 -11 285 273 23 61 chr17 61708314 61708446 -23730034 - MIR3 SINE MIR -48 160 34 2183 96 0 0 chr17 61709047 61709339 -23729141 + AluSq SINE Alu 7 298 -15 2258 93 3 6 chr17 61709341 61709679 -23728801 + AluSp SINE Alu 1 313 0 203 178 22 22 chr17 61710207 61710252 -23728228 + MER5A DNA MER1_type 40 84 -105 196 333 0 0 chr17 61710311 61710371 -23728109 - MER5A DNA MER1_type -102 87 28 637 290 114 38 chr17 61710738 61711055 -23727425 + MER102b DNA MER1_type 1 341 0 1085 140 41 86 chr17 61711516 61711737 -23726743 - AluJb SINE Alu -25 287 77 372 235 0 0 chr17 61711770 61711838 -23726642 + AluJ/FLAM SINE Alu 1 68 -234 1194 166 0 0 chr17 61711938 61712125 -23726355 - AluJb SINE Alu -41 271 85 542 301 86 39 chr17 61712203 61712694 -23725786 - L1ME4a LINE L1 0 6121 5608 2363 169 85 9 chr17 61713864 61714289 -23724191 + MSTB2 LTR MaLR 1 457 0 285 82 23 35 chr17 61715031 61715088 -23723392 + Alu SINE Alu 1 41 -262 566 149 0 21 chr17 61715188 61715326 -23723154 + AluSp/q SINE Alu 194 329 0 5834 134 26 24 chr17 61715329 61715502 -23722978 + L1MA4 LINE L1 4834 5005 -1295 2086 120 3 0 chr17 61715502 61715803 -23722677 + AluSx SINE Alu 1 302 -10 5834 134 26 24 chr17 61715803 61717080 -23721400 + L1MA4 LINE L1 5005 6285 -15 406 279 68 0 chr17 61717132 61717279 -23721201 + L1MEc LINE L1 1627 1783 -4613 335 274 64 83 chr17 61717744 61718048 -23720432 + L1MEc LINE L1 1770 2078 -4137 1869 164 0 0 chr17 61718048 61718358 -23720122 + AluSx SINE Alu 1 310 -2 335 274 64 83 chr17 61718358 61718662 -23719818 + L1MEc LINE L1 2078 2297 -3918 2147 77 59 0 chr17 61718662 61718949 -23719531 + AluY SINE Alu 1 304 -7 335 274 64 83 chr17 61718949 61719130 -23719350 + L1MEc LINE L1 2297 2480 -3735 239 260 68 14 chr17 61719151 61719224 -23719256 + L1MEc LINE L1 2720 2796 -3419 1858 107 16 0 chr17 61719324 61719567 -23718913 + AluSx SINE Alu 35 306 0 193 40 0 0 chr17 61719567 61719592 -23718888 + (CAAAA)n Simple_repeat Simple_repeat 1 180 0 1923 105 43 0 chr17 61719724 61720001 -23718479 - AluSq SINE Alu -24 289 1 281 136 0 0 chr17 61720860 61720904 -23717576 + AluSc SINE Alu 192 235 -64 1399 285 151 27 chr17 61721233 61721318 -23717162 + L2 LINE L2 316 389 -2925 2089 141 0 3 chr17 61721318 61721616 -23716864 - AluJb SINE Alu -11 301 5 1399 285 151 27 chr17 61721616 61722204 -23716276 + L2 LINE L2 389 1073 -2241 269 286 0 11 chr17 61722263 61722354 -23716126 - L1MC5 LINE L1 -75 7886 7797 1205 261 151 50 chr17 61722419 61722627 -23715853 + L2 LINE L2 1836 2022 -1292 2048 130 3 0 chr17 61722627 61722912 -23715568 - AluSx SINE Alu -26 286 1 1205 261 151 50 chr17 61722912 61723264 -23715216 + L2 LINE L2 2022 2466 -848 2118 112 20 13 chr17 61723264 61723567 -23714913 + AluSc SINE Alu 1 305 -4 1205 261 151 50 chr17 61723567 61723623 -23714857 + L2 LINE L2 2466 2515 -799 37 77 0 10 chr17 61723757 61723816 -23714664 + AT_rich Low_complexity Low_complexity 1 60 -43 2375 100 0 0 chr17 61723816 61724126 -23714354 + AluSx SINE Alu 1 310 -2 37 77 0 10 chr17 61724126 61724170 -23714310 + AT_rich Low_complexity Low_complexity 60 103 0 2062 147 3 0 chr17 61724172 61724465 -23714015 + AluSx SINE Alu 1 294 -18 2092 151 3 0 chr17 61724596 61724907 -23713573 + AluSp SINE Alu 1 312 -1 1838 171 3 7 chr17 61726105 61726409 -23712071 + AluJb SINE Alu 1 303 -9 23 0 0 0 chr17 61727029 61727052 -23711428 + AT_rich Low_complexity Low_complexity 1 23 0 2197 116 0 3 chr17 61727186 61727489 -23710991 + AluSg SINE Alu 1 302 -8 2259 105 7 0 chr17 61727552 61727848 -23710632 + AluSp SINE Alu 1 298 -15 287 240 19 67 chr17 61727892 61727996 -23710484 - L1ME3A LINE L1 -104 6066 5968 1017 254 62 62 chr17 61728063 61728123 -23710357 - L1ME3A LINE L1 -215 5955 5896 2027 150 7 0 chr17 61728123 61728430 -23710050 - AluJb SINE Alu -3 309 1 1017 254 62 62 chr17 61728430 61728933 -23709547 - L1ME3A LINE L1 -273 5897 5392 2334 105 0 0 chr17 61728933 61729229 -23709251 - AluSg SINE Alu -14 296 1 1364 232 85 46 chr17 61729282 61729716 -23708764 - L1ME3A LINE L1 -1076 5070 4601 339 25 0 0 chr17 61729716 61729756 -23708724 + (CA)n Simple_repeat Simple_repeat 1 40 0 1364 232 85 46 chr17 61729756 61729967 -23708513 - L1ME3A LINE L1 -1545 4601 4400 1003 216 107 57 chr17 61730013 61730398 -23708082 + MLT1C LTR MaLR 6 409 -58 2313 79 23 3 chr17 61730398 61730701 -23707779 + AluSc SINE Alu 1 309 0 377 155 0 14 chr17 61730828 61730899 -23707581 + MLT1C LTR MaLR 398 467 0 2164 89 0 4 chr17 61730980 61731280 -23707200 - AluSg SINE Alu 0 299 1 373 310 147 16 chr17 61731283 61731412 -23707068 - MIR3 SINE MIR -61 147 2 208 93 23 23 chr17 61731583 61731626 -23706854 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 578 191 8 38 chr17 61731716 61731847 -23706633 - FAM SINE Alu -5 44 1 2212 133 0 0 chr17 61731872 61732174 -23706306 - AluSx SINE Alu -10 302 1 1582 161 25 68 chr17 61732175 61732498 -23705982 - AluJb SINE Alu -3 309 1 40 37 0 0 chr17 61732690 61732744 -23705736 + AT_rich Low_complexity Low_complexity 1 54 0 1099 184 11 0 chr17 61733568 61733758 -23704722 + AluJb SINE Alu 103 294 -18 616 189 27 20 chr17 61733760 61733908 -23704572 - MER3 DNA MER1_type -60 149 1 208 380 117 7 chr17 61734210 61734347 -23704133 + MIR3 SINE MIR 42 193 -15 255 188 94 7 chr17 61737319 61737457 -23701023 + (TA)n Simple_repeat Simple_repeat 1 150 0 2124 122 17 0 chr17 61737741 61738036 -23700444 - AluSx SINE Alu -12 300 1 1814 141 88 9 chr17 61739653 61739972 -23698508 - MER7A DNA MER2_type -4 342 1 2069 126 10 3 chr17 61740181 61740482 -23697998 - AluSx SINE Alu -9 303 1 384 0 0 54 chr17 61741305 61741361 -23697119 - L1PB1 LINE L1 -1 6150 6098 2233 114 3 0 chr17 61741363 61741671 -23696809 - AluSx SINE Alu -3 309 1 323 130 37 0 chr17 61741923 61741977 -23696503 + U6 snRNA snRNA 1 56 -51 243 0 0 0 chr17 61742385 61742412 -23696068 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1719 155 3 14 chr17 61742417 61742701 -23695779 - AluJb SINE Alu -31 281 1 658 235 0 0 chr17 61743182 61743314 -23695166 - AluJ SINE Alu -11 301 170 * 670 146 10 0 chr17 61743310 61743413 -23695067 - AluJ SINE Alu -193 119 16 22 0 0 0 chr17 61744354 61744376 -23694104 + AT_rich Low_complexity Low_complexity 1 22 0 2180 123 3 0 chr17 61744722 61745023 -23693457 - AluSx SINE Alu -10 302 1 1209 180 5 15 chr17 61745167 61745373 -23693107 - AluJo SINE Alu -15 297 94 766 169 16 0 chr17 61745498 61745622 -23692858 - FLAM_C SINE Alu -17 126 1 2095 90 0 0 chr17 61745731 61745999 -23692481 + AluY SINE Alu 44 311 0 2009 119 36 0 chr17 61746201 61746479 -23692001 - AluSx SINE Alu -24 288 1 234 0 0 0 chr17 61747143 61747169 -23691311 + (T)n Simple_repeat Simple_repeat 1 26 0 350 346 102 26 chr17 61747692 61748036 -23690444 - L1MC/D LINE L1 -2118 5690 5321 2365 60 0 17 chr17 61748228 61748528 -23689952 - AluY SINE Alu -16 295 1 1248 209 5 0 chr17 61748692 61748912 -23689568 + AluJo SINE Alu 1 221 -91 2042 116 3 7 chr17 61749081 61749365 -23689115 - AluSg SINE Alu -8 302 20 321 153 42 0 chr17 61749535 61749607 -23688873 - AluSc SINE Alu -202 97 23 2444 89 0 0 chr17 61750499 61750802 -23687678 - AluSx SINE Alu -8 304 2 1627 186 11 4 chr17 61752324 61752604 -23685876 + AluJo SINE Alu 1 282 -30 1847 163 0 14 chr17 61753071 61753366 -23685114 + AluJb SINE Alu 1 291 -21 2298 90 13 6 chr17 61753572 61753883 -23684597 + AluSq SINE Alu 1 313 0 23 0 0 0 chr17 61754471 61754494 -23683986 + AT_rich Low_complexity Low_complexity 1 23 0 637 119 201 0 chr17 61754693 61754827 -23683653 + AluSq SINE Alu 18 178 -135 469 154 150 150 chr17 61754942 61755101 -23683379 - MER113 DNA MER1_type? -166 355 197 2305 111 3 0 chr17 61755101 61755407 -23683073 - AluSx SINE Alu -1 311 5 469 154 150 150 chr17 61755407 61755421 -23683059 - MER113 DNA MER1_type? -324 197 184 823 160 0 0 chr17 61755421 61755552 -23682928 - FLAM_C SINE Alu 0 133 3 469 154 150 150 chr17 61755552 61755604 -23682876 - MER113 DNA MER1_type? -336 185 129 401 164 0 0 chr17 61755611 61755684 -23682796 + HY3 scRNA scRNA 26 98 -3 23 33 0 0 chr17 61755684 61755714 -23682766 + AT_rich Low_complexity Low_complexity 1 30 0 1861 142 35 0 chr17 61755869 61756157 -23682323 - AluSx SINE Alu -14 298 1 246 62 0 0 chr17 61756326 61756358 -23682122 + (T)n Simple_repeat Simple_repeat 1 32 0 1395 190 3 28 chr17 61756374 61756658 -23681822 + AluJb SINE Alu 1 277 -35 814 169 7 14 chr17 61756662 61756804 -23681676 - FLAM_C SINE Alu 0 143 3 232 229 9 138 chr17 61756890 61756926 -23681554 - MER5B DNA MER1_type -83 95 56 1288 179 163 12 chr17 61756926 61757177 -23681303 - AluJo SINE Alu -23 289 1 232 229 9 138 chr17 61757177 61757249 -23681231 - MER5B DNA MER1_type -122 56 1 2246 116 0 0 chr17 61757650 61757953 -23680527 - AluSx SINE Alu -9 303 1 2308 119 0 0 chr17 61760002 61760312 -23678168 - AluSx SINE Alu -2 310 1 189 0 0 0 chr17 61760316 61760337 -23678143 + (T)n Simple_repeat Simple_repeat 1 21 0 1926 171 0 0 chr17 61760387 61760686 -23677794 - AluSx SINE Alu -12 300 2 730 205 32 32 chr17 61760752 61760937 -23677543 - MIR SINE MIR -15 247 63 494 160 41 148 chr17 61760973 61761044 -23677436 - MIR SINE MIR 0 262 218 1633 180 21 0 chr17 61761044 61761328 -23677152 + AluJo SINE Alu 21 310 -2 494 160 41 148 chr17 61761328 61761425 -23677055 - MIR SINE MIR -44 218 112 1583 192 8 0 chr17 61761807 61762068 -23676412 - AluJb SINE Alu -29 283 21 430 295 90 12 chr17 61762913 61763079 -23675401 + MIR SINE MIR 14 192 -70 189 0 0 0 chr17 61763726 61763747 -23674733 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 1292 216 31 31 chr17 61763789 61764278 -23674202 - L1MB7 LINE L1 -10 6174 5531 401 0 0 20 chr17 61764324 61764374 -23674106 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1299 156 144 32 chr17 61764374 61764624 -23673856 - AluJo SINE Alu -34 278 1 3725 191 68 20 chr17 61764641 61765595 -23672885 - L1MB5 LINE L1 -9 6976 5965 1766 150 58 10 chr17 61765595 61765729 -23672751 + AluJo SINE Alu 2 128 -184 2266 103 3 7 chr17 61765729 61766031 -23672449 + AluSx SINE Alu 1 301 -11 1766 150 58 10 chr17 61766031 61766190 -23672290 + AluJo SINE Alu 128 309 -3 3725 191 68 20 chr17 61766190 61766257 -23672223 - L1MB5 LINE L1 -1020 5965 5903 2376 209 86 52 chr17 61766280 61766926 -23671554 - L1MB5 LINE L1 -4736 2223 1601 180 77 0 0 chr17 61766926 61766952 -23671528 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2126 91 7 14 chr17 61766954 61767239 -23671241 - AluSx SINE Alu -25 287 5 2376 209 86 52 chr17 61767239 61767632 -23670848 - L1MB5 LINE L1 -5358 1601 1144 380 169 13 0 chr17 61767643 61767720 -23670760 + GA-rich Low_complexity Low_complexity 1 78 0 555 218 80 18 chr17 61767771 61767953 -23670527 - L1MB5 LINE L1 -5722 1237 923 501 393 84 24 chr17 61767998 61768207 -23670273 - L1MB5 LINE L1 -5993 862 667 2184 117 0 3 chr17 61768207 61768505 -23669975 - AluSx SINE Alu -15 297 1 501 393 84 24 chr17 61768505 61768806 -23669674 - L1MB5 LINE L1 -6188 667 321 3190 223 75 45 chr17 61768814 61769317 -23669163 - L1ME LINE L1 -728 5940 5454 899 187 0 50 chr17 61769317 61769499 -23668981 - FAM SINE Alu -2 173 1 3190 223 75 45 chr17 61769499 61769619 -23668861 - L1ME LINE L1 -1214 5454 5339 1932 149 20 0 chr17 61769619 61769914 -23668566 - AluSx SINE Alu -11 301 1 3190 223 75 45 chr17 61769914 61770691 -23667789 - L1ME LINE L1 -1329 5339 4514 1812 131 4 11 chr17 61770799 61771066 -23667414 - AluSg SINE Alu -45 265 1 807 70 0 0 chr17 61771066 61771181 -23667299 - L1 LINE L1 -1310 4836 4722 1627 261 105 49 chr17 61771183 61772512 -23665968 - L1ME LINE L1 -4727 1919 564 672 280 60 9 chr17 61772708 61772926 -23665554 - L1MB5 LINE L1 -6620 239 11 259 317 134 49 chr17 61773216 61773358 -23665122 + MIR SINE MIR 51 204 -58 711 205 0 16 chr17 61773751 61773878 -23664602 + FLAM_A SINE Alu 1 125 -8 354 145 0 43 chr17 61773987 61774023 -23664457 + MER41B LTR ERV1 482 515 -120 2084 146 7 0 chr17 61774023 61774325 -23664155 - AluJb SINE Alu -8 304 1 354 145 0 43 chr17 61774325 61774357 -23664123 + MER41B LTR ERV1 515 547 -88 26 0 0 0 chr17 61774357 61774383 -23664097 + AT_rich Low_complexity Low_complexity 1 26 0 2185 106 0 3 chr17 61776566 61776876 -23661604 + AluSx SINE Alu 1 309 0 21 36 0 0 chr17 61776934 61776962 -23661518 + AT_rich Low_complexity Low_complexity 1 28 0 1699 184 7 7 chr17 61777501 61777826 -23660654 + AluJb SINE Alu 1 312 0 24 32 0 0 chr17 61777888 61777919 -23660561 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 61778131 61778153 -23660327 + AT_rich Low_complexity Low_complexity 1 22 0 2119 112 0 7 chr17 61778372 61778668 -23659812 - AluSg SINE Alu -4 306 13 788 142 8 22 chr17 61779141 61779275 -23659205 + FLAM_A SINE Alu 2 133 0 1334 160 36 9 chr17 61779539 61779758 -23658722 + MER6 DNA MER2_type 1 225 -640 538 230 56 47 chr17 61780135 61780416 -23658064 - LTR45 LTR ERV1 -1 593 324 1230 154 96 81 chr17 61780590 61780862 -23657618 - AluJo SINE Alu -30 282 7 3914 135 58 6 chr17 61782492 61783127 -23655353 + MER6 DNA MER2_type 198 865 0 2213 98 17 7 chr17 61783321 61783616 -23654864 + AluSq SINE Alu 1 298 -15 2162 123 10 0 chr17 61784447 61784756 -23653724 + AluSx SINE Alu 1 312 0 2209 116 0 0 chr17 61785280 61785574 -23652906 - AluSq SINE Alu -19 294 1 1617 212 3 0 chr17 61786037 61786330 -23652150 - AluJb SINE Alu -18 294 1 1893 141 20 3 chr17 61787326 61787625 -23650855 + AluJo SINE Alu 7 310 -2 1947 133 10 13 chr17 61787657 61787965 -23650515 + AluSx SINE Alu 1 307 -5 791 205 30 35 chr17 61787987 61788187 -23650293 - L1ME3 LINE L1 -100 6062 5864 266 273 127 18 chr17 61788309 61788419 -23650061 + L3 LINE CR1 1390 1511 -66 739 189 0 0 chr17 61788648 61788780 -23649700 - FLAM_C SINE Alu -11 132 1 2122 129 0 10 chr17 61789563 61789738 -23648742 - AluSx SINE Alu -4 308 136 2207 107 3 0 chr17 61789738 61790036 -23648444 - AluY SINE Alu -12 299 1 2122 129 0 10 chr17 61790036 61790171 -23648309 - AluSx SINE Alu -176 136 1 2132 101 10 3 chr17 61790208 61790496 -23647984 + AluSg SINE Alu 1 290 -20 2240 89 24 0 chr17 61790609 61790901 -23647579 - AluSg SINE Alu -11 299 1 2107 127 7 0 chr17 61790901 61791193 -23647287 - AluSx SINE Alu -18 294 1 1762 176 0 44 chr17 61791369 61791688 -23646792 + AluJo SINE Alu 1 305 -7 299 278 70 43 chr17 61793436 61793551 -23644929 - MIR3 SINE MIR -48 160 43 2302 100 3 0 chr17 61793626 61793925 -23644555 + AluSp SINE Alu 3 302 -11 206 328 17 0 chr17 61793936 61793994 -23644486 - L3b LINE CR1 -13 1570 1512 239 292 34 22 chr17 61794192 61794281 -23644199 - MIR SINE MIR -65 143 54 1932 156 0 22 chr17 61794883 61795197 -23643283 - AluJo SINE Alu -5 307 1 220 341 210 7 chr17 61795218 61795356 -23643124 + L2 LINE L2 3106 3271 -1 2420 280 90 48 chr17 61795593 61796046 -23642434 + L1MEc LINE L1 20 452 -5944 1902 150 0 26 chr17 61796046 61796359 -23642121 - AluSx SINE Alu -7 305 1 2420 280 90 48 chr17 61796359 61796759 -23641721 + L1MEc LINE L1 452 834 -5562 2382 84 0 7 chr17 61796759 61797067 -23641413 + AluSx SINE Alu 1 306 -6 2420 280 90 48 chr17 61797067 61797860 -23640620 + L1MEc LINE L1 834 1737 -4659 199 264 0 19 chr17 61797885 61797938 -23640542 + L2 LINE L2 2707 2758 -556 * 838 246 97 47 chr17 61797906 61798248 -23640232 + L2 LINE L2 2953 3311 -2 2257 112 0 0 chr17 61798256 61798561 -23639919 + AluSx SINE Alu 1 305 -7 1299 126 0 6 chr17 61798801 61798983 -23639497 - AluSg/x SINE Alu -20 292 112 755 185 0 0 chr17 61799178 61799297 -23639183 + FLAM_C SINE Alu 1 119 -24 228 67 0 0 chr17 61800019 61800049 -23638431 + (TA)n Simple_repeat Simple_repeat 1 30 0 1621 156 60 11 chr17 61801000 61801283 -23637197 - AluJo SINE Alu -13 299 3 226 349 24 0 chr17 61801311 61801394 -23637086 - L2 LINE L2 -2 3311 3227 1660 145 78 7 chr17 61802301 61802583 -23635897 + AluJb SINE Alu 3 304 -8 1833 152 0 0 chr17 61802636 61802958 -23635522 + AluJb SINE Alu 1 322 0 2265 98 0 0 chr17 61803171 61803478 -23635002 - AluSq SINE Alu 0 307 1 2247 92 7 3 chr17 61804338 61804632 -23633848 + AluSg SINE Alu 1 295 -15 513 225 62 16 chr17 61804681 61804810 -23633670 - MIR SINE MIR -63 199 65 414 312 97 19 chr17 61804855 61805009 -23633471 + MER5A DNA MER1_type 1 166 -23 2259 103 0 0 chr17 61805442 61805733 -23632747 - AluSc SINE Alu -18 291 1 256 352 110 30 chr17 61806772 61807235 -23631245 - L2 LINE L2 -920 2394 1895 2262 98 0 25 chr17 61807284 61807601 -23630879 - AluSg SINE Alu -1 309 1 1173 155 43 78 chr17 61807810 61808175 -23630305 + MER31B LTR ERV1 1 466 0 2074 139 3 0 chr17 61808938 61809240 -23629240 + AluSx SINE Alu 3 305 -7 1055 224 178 39 chr17 61809308 61809595 -23628885 + MLT1C LTR MaLR 1 247 -220 3351 168 54 65 chr17 61809595 61809949 -23628531 + LTR39 LTR ERV1 1 357 -426 2134 106 0 7 chr17 61809949 61810232 -23628248 + AluSx SINE Alu 3 283 -29 180 0 0 0 chr17 61810232 61810252 -23628228 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3351 168 54 65 chr17 61810252 61810687 -23627793 + LTR39 LTR ERV1 355 783 0 1055 224 178 39 chr17 61810687 61810809 -23627671 + MLT1C LTR MaLR 247 467 0 2434 78 0 3 chr17 61810913 61811222 -23627258 + AluY SINE Alu 1 308 -3 1483 155 22 58 chr17 61811227 61811504 -23626976 + AluJb SINE Alu 1 267 -45 2540 61 0 3 chr17 61812078 61812389 -23626091 - AluY SINE Alu -1 310 1 1057 197 58 4 chr17 61813109 61813429 -23625051 + MER65C LTR ERV1 1 385 -76 373 171 171 0 chr17 61813584 61813672 -23624808 + HsTC2 DNA Tc2 21 1841 -57 1075 221 86 34 chr17 61813672 61813939 -23624541 + MER21B LTR ERV1 1 281 -582 446 127 0 0 chr17 61813957 61814020 -23624460 + MER21B LTR ERV1 633 695 -168 699 286 81 5 chr17 61814048 61814258 -23624222 - MIR SINE MIR -16 246 21 384 22 0 0 chr17 61814609 61814654 -23623826 + (TG)n Simple_repeat Simple_repeat 2 46 0 530 261 65 43 chr17 61814867 61815097 -23623383 + L2 LINE L2 712 946 -2368 2404 278 100 34 chr17 61815098 61816279 -23622201 + L2 LINE L2 1895 3150 -163 299 221 15 61 chr17 61816620 61816751 -23621729 + L1MEd LINE L1 61 185 -5934 752 161 0 0 chr17 61817169 61817287 -23621193 - FLAM_C SINE Alu -15 118 1 234 0 0 0 chr17 61817465 61817491 -23620989 + (TG)n Simple_repeat Simple_repeat 2 27 0 543 290 148 26 chr17 61818042 61818483 -23619997 + L1ME2 LINE L1 5423 5911 -210 2279 184 65 21 chr17 61818483 61819010 -23619470 + MER44D DNA MER2_type 1 605 0 1852 194 80 14 chr17 61819291 61819729 -23618751 + MLT1C LTR MaLR 1 467 0 568 187 28 9 chr17 61819791 61819898 -23618582 + MER2 DNA MER2_type 1 109 -236 1659 118 38 77 chr17 61819898 61820198 -23618282 + MER49 LTR ERV1 4 291 -632 1845 157 11 4 chr17 61820198 61820479 -23618001 + AluJo SINE Alu 2 284 -28 1659 118 38 77 chr17 61820479 61820518 -23617962 + MER49 LTR ERV1 291 330 -593 2261 98 27 0 chr17 61820518 61820814 -23617666 - AluSx SINE Alu 0 312 9 2841 146 12 100 chr17 61820858 61821509 -23616971 + MER49 LTR ERV1 330 923 0 727 111 0 0 chr17 61821509 61821617 -23616863 + MER2 DNA MER2_type 103 210 -135 444 257 59 10 chr17 61821643 61821744 -23616736 - AluJo SINE Alu -86 226 121 275 275 11 11 chr17 61821838 61821929 -23616551 + L1ME2 LINE L1 6028 6118 -46 1508 178 0 46 chr17 61821934 61822215 -23616265 + AluJo SINE Alu 13 280 -32 283 151 0 27 chr17 61822257 61822330 -23616150 + L1MA10 LINE L1 6262 6332 -2 2104 187 17 37 chr17 61822335 61822737 -23615743 - MSTD LTR MaLR -2 394 1 2163 140 42 31 chr17 61822813 61823171 -23615309 - MLT1A1 LTR MaLR -3 362 1 4518 172 16 23 chr17 61823744 61824609 -23613871 - L1MB7 LINE L1 -1 6183 5325 1615 123 135 78 chr17 61824993 61825187 -23613293 + MER47A DNA MER2_type 14 237 -2086 1934 109 7 48 chr17 61825187 61825524 -23612956 - AluSx SINE Alu 0 325 1 1615 123 135 78 chr17 61825524 61825662 -23612818 + MER47A DNA MER2_type 237 366 0 314 289 0 0 chr17 61825978 61826061 -23612419 - L2 LINE L2 0 3313 3231 28 0 0 0 chr17 61826111 61826139 -23612341 + AT_rich Low_complexity Low_complexity 1 28 0 572 264 157 26 chr17 61826420 61826847 -23611633 + L1MCc LINE L1 814 1382 -5041 1173 263 69 57 chr17 61826914 61827756 -23610724 + L1MCc LINE L1 1826 2704 -4418 617 307 74 13 chr17 61827928 61828159 -23610321 - MIR SINE MIR -3 259 15 2838 138 14 21 chr17 61828184 61828613 -23609867 - MSTB LTR MaLR 0 426 1 180 111 0 0 chr17 61829159 61829186 -23609294 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 2270 114 0 0 chr17 61829433 61829730 -23608750 + AluSx SINE Alu 1 297 -15 3491 136 12 28 chr17 61829756 61830167 -23608313 + L1MA4 LINE L1 4135 4534 -1612 2280 109 6 3 chr17 61830167 61830478 -23608002 - AluSx SINE Alu 0 312 1 3491 136 12 28 chr17 61830478 61830720 -23607760 + L1MA4 LINE L1 4534 4778 -1368 3224 165 56 44 chr17 61830722 61831534 -23606946 + LTR1 LTR ERV1 9 821 -5 3007 143 50 68 chr17 61831541 61831723 -23606757 + L1MA4 LINE L1 4774 4958 -1342 2221 117 3 3 chr17 61831723 61832023 -23606457 + AluSx SINE Alu 1 300 -12 3007 143 50 68 chr17 61832023 61832423 -23606057 + L1MA4 LINE L1 4958 5364 -936 1611 173 0 7 chr17 61832423 61832694 -23605786 + AluJb SINE Alu 29 297 -15 3007 143 50 68 chr17 61832694 61832841 -23605639 + L1MA4 LINE L1 5364 5512 -788 2142 134 7 0 chr17 61832841 61833148 -23605332 + AluSg SINE Alu 1 309 -1 3007 143 50 68 chr17 61833148 61833496 -23604984 + L1MA4 LINE L1 5512 5850 -450 2148 116 3 0 chr17 61833496 61833788 -23604692 + AluSc SINE Alu 1 293 -16 3007 143 50 68 chr17 61833788 61833831 -23604649 + L1MA4 LINE L1 5850 5892 -408 962 148 7 0 chr17 61833831 61833973 -23604507 + AluJb SINE Alu 1 143 -169 1593 190 67 18 chr17 61833973 61834363 -23604117 + L1MA4 LINE L1 5892 6300 0 2212 112 0 7 chr17 61834618 61834921 -23603559 + AluSq SINE Alu 1 301 -12 358 304 10 20 chr17 61835079 61835181 -23603299 + MIR SINE MIR 25 125 -137 963 190 0 76 chr17 61835486 61835733 -23602747 - AluJb SINE Alu 0 317 87 2273 103 0 28 chr17 61836039 61836358 -23602122 + AluSx SINE Alu 1 310 -2 957 268 107 55 chr17 61836646 61837206 -23601274 + L1MEc LINE L1 466 995 -5401 1984 138 0 19 chr17 61837206 61837518 -23600962 - AluJb SINE Alu -6 306 1 957 268 107 55 chr17 61837518 61838056 -23600424 + L1MEc LINE L1 995 1621 -4775 1914 179 107 19 chr17 61838078 61838191 -23600289 + L1MB4 LINE L1 5365 5467 -713 2233 98 0 28 chr17 61838191 61838508 -23599972 + AluSx SINE Alu 1 308 -4 1914 179 107 19 chr17 61838508 61838814 -23599666 + L1MB4 LINE L1 5467 5821 -359 2081 134 3 0 chr17 61839634 61839939 -23598541 + AluSq SINE Alu 1 306 -7 1405 160 8 145 chr17 61839939 61840307 -23598173 + L1MB4 LINE L1 5818 6131 -52 2019 143 0 7 chr17 61840307 61840608 -23597872 + AluJb SINE Alu 1 299 -13 1405 160 8 145 chr17 61840608 61840633 -23597847 + L1MB4 LINE L1 6131 6158 -25 1114 192 85 5 chr17 61840634 61840858 -23597622 + AluJo SINE Alu 27 268 -44 1526 130 4 0 chr17 61840859 61841090 -23597390 + AluSg/x SINE Alu 79 310 0 597 248 105 31 chr17 61841093 61841351 -23597129 + L3 LINE CR1 608 884 -693 2170 158 18 8 chr17 61841963 61842350 -23596130 + L1MB4 LINE L1 5789 6179 -1 2073 142 0 6 chr17 61842571 61842882 -23595598 + AluJb SINE Alu 1 309 -3 1063 147 66 0 chr17 61842884 61843082 -23595398 - MER2 DNA MER2_type -134 211 1 3418 144 60 31 chr17 61843195 61843780 -23594700 - MER6A DNA MER2_type -3 602 1 315 182 91 45 chr17 61843912 61843978 -23594502 - MLT1D LTR MaLR -447 58 2 790 275 38 51 chr17 61844360 61844811 -23593669 + L1MDb LINE L1 775 1219 -5190 767 172 8 30 chr17 61845251 61845385 -23593095 - FLAM_A SINE Alu -2 131 1 21 82 0 0 chr17 61845534 61845583 -23592897 + AT_rich Low_complexity Low_complexity 1 49 0 3286 157 98 30 chr17 61845983 61846715 -23591765 + L1MB8 LINE L1 5397 6178 0 1732 175 7 11 chr17 61847074 61847359 -23591121 + AluJo SINE Alu 1 284 -28 180 0 0 0 chr17 61847359 61847379 -23591101 + (TA)n Simple_repeat Simple_repeat 2 21 0 2193 111 3 3 chr17 61847796 61848094 -23590386 + AluSp SINE Alu 1 298 -15 518 230 151 52 chr17 61848099 61848214 -23590266 + HAL1 LINE L1 1978 2080 -427 2013 142 0 22 chr17 61848214 61848525 -23589955 + AluSx SINE Alu 8 311 -1 518 230 151 52 chr17 61848525 61848700 -23589780 + HAL1 LINE L1 2080 2297 -210 1699 155 0 8 chr17 61848720 61848985 -23589495 + AluJo SINE Alu 1 263 -49 559 176 0 0 chr17 61848985 61849076 -23589404 + AluS SINE Alu 220 310 -2 384 256 100 19 chr17 61849076 61849236 -23589244 + HAL1 LINE L1 2329 2501 -6 2088 117 40 0 chr17 61849376 61849674 -23588806 - AluSq SINE Alu -3 310 1 1917 164 29 13 chr17 61849936 61850313 -23588167 + L1MA5 LINE L1 5870 6252 -48 306 214 14 0 chr17 61850313 61850383 -23588097 + MER52A LTR ERV1 1 71 -1684 5884 201 67 55 chr17 61850493 61852174 -23586306 + MER52A LTR ERV1 55 1755 0 244 95 48 0 chr17 61852174 61852216 -23586264 + L1MA5 LINE L1 6249 6292 -8 916 145 8 0 chr17 61852552 61852683 -23585797 - FLAM_C SINE Alu -1 132 1 21 0 0 0 chr17 61853068 61853089 -23585391 + AT_rich Low_complexity Low_complexity 1 21 0 345 157 24 12 chr17 61853511 61853594 -23584886 + CT-rich Low_complexity Low_complexity 1 84 0 1378 179 0 0 chr17 61853615 61853838 -23584642 - AluJo SINE Alu -5 307 85 1911 163 3 3 chr17 61854359 61854659 -23583821 + AluJb SINE Alu 1 300 -12 1722 166 42 3 chr17 61854703 61854992 -23583488 + AluJb SINE Alu 1 300 -12 676 221 39 106 chr17 61854993 61855036 -23583444 - L1ME1 LINE L1 -3 6161 6117 1775 141 16 49 chr17 61855036 61855341 -23583139 + AluJb SINE Alu 1 295 -17 676 221 39 106 chr17 61855341 61855441 -23583039 - L1ME1 LINE L1 -47 6117 6012 2370 82 0 0 chr17 61855441 61855733 -23582747 + AluSq SINE Alu 1 292 -21 676 221 39 106 chr17 61855733 61855971 -23582509 - L1ME1 LINE L1 -152 6012 5801 1041 164 86 13 chr17 61856174 61856393 -23582087 - Tigger2 DNA MER2_type 0 2718 2480 2122 125 7 3 chr17 61856393 61856698 -23581782 + AluSx SINE Alu 1 306 -6 1041 164 86 13 chr17 61856698 61856710 -23581770 - Tigger2 DNA MER2_type -238 2480 2470 255 215 11 32 chr17 61856731 61856824 -23581656 + GA-rich Low_complexity Low_complexity 1 91 0 4061 151 47 3 chr17 61856902 61857585 -23580895 - Tigger2 DNA MER2_type -1961 757 45 1618 39 0 0 chr17 61857585 61857790 -23580690 + AluY SINE Alu 100 304 0 386 164 0 0 chr17 61857834 61857889 -23580591 - Tigger2 DNA MER2_type -2663 55 1 991 61 0 0 chr17 61857919 61858034 -23580446 - AluSg SINE Alu -195 115 1 1505 160 71 14 chr17 61858062 61858344 -23580136 - AluJo SINE Alu -14 298 1 240 260 0 0 chr17 61858344 61858394 -23580086 + Zaphod DNA AcHobo 3982 4031 0 2789 16 0 3 chr17 61859509 61859819 -23578661 + AluYa5 SINE Alu 1 309 -2 1673 153 11 21 chr17 61860670 61860957 -23577523 + AluJb SINE Alu 1 284 -28 1774 170 3 7 chr17 61861117 61861417 -23577063 + AluSx SINE Alu 1 299 -13 1925 156 3 0 chr17 61861524 61861813 -23576667 + AluJb SINE Alu 1 290 -22 2278 113 0 3 chr17 61861975 61862286 -23576194 - AluSx SINE Alu -2 310 1 2370 109 0 0 chr17 61862376 61862678 -23575802 + AluSq SINE Alu 1 302 -11 883 147 0 15 chr17 61863370 61863506 -23574974 + AluJb SINE Alu 2 135 -177 6689 78 3 0 chr17 61863506 61864370 -23574110 - L1P LINE L1 -3757 2389 1523 * 9141 146 167 21 chr17 61864367 61866132 -23572348 - L1P LINE L1 -4115 2031 11 5490 60 1 0 chr17 61866131 61866825 -23571655 + L1P LINE L1 2392 3086 -3060 * 2291 109 0 6 chr17 61866825 61867136 -23571344 + AluSq SINE Alu 1 309 -4 2267 104 0 3 chr17 61867204 61867503 -23570977 - AluSg SINE Alu -12 298 1 1799 148 20 30 chr17 61867526 61867830 -23570650 - AluJo SINE Alu -11 301 1 787 202 0 0 chr17 61867905 61868034 -23570446 - FLAM_A SINE Alu 0 133 5 2026 164 0 0 chr17 61868775 61869087 -23569393 + AluSx SINE Alu 1 312 0 874 155 8 0 chr17 61869191 61869320 -23569160 - FLAM_C SINE Alu -3 130 1 1772 113 79 48 chr17 61870260 61870427 -23568053 - AluSx SINE Alu -12 300 119 2566 57 0 0 chr17 61870427 61870728 -23567752 - AluY SINE Alu -10 301 1 1772 113 79 48 chr17 61870728 61870851 -23567629 - AluSx SINE Alu -193 119 1 2483 58 0 0 chr17 61870916 61871210 -23567270 + AluY SINE Alu 1 294 -17 1890 144 31 0 chr17 61871568 61871859 -23566621 + AluJb SINE Alu 1 300 -12 191 177 0 65 chr17 61872132 61872194 -23566286 - L2 LINE L2 -110 3203 3146 * 234 208 59 10 chr17 61872174 61872275 -23566205 + (TATAA)n Simple_repeat Simple_repeat 2 107 0 2005 127 30 10 chr17 61872373 61872672 -23565808 + AluSx SINE Alu 1 305 -7 685 61 20 0 chr17 61872672 61872771 -23565709 + (TA)n Simple_repeat Simple_repeat 2 102 0 2130 103 31 7 chr17 61873022 61873314 -23565166 + AluSx SINE Alu 1 299 -13 180 277 128 43 chr17 61873332 61873426 -23565054 + L2 LINE L2 3103 3204 -109 347 195 8 102 chr17 61873497 61873583 -23564897 - L1MEd LINE L1 -5088 1031 959 1833 175 3 13 chr17 61873583 61873898 -23564582 - AluJo SINE Alu 0 312 1 347 195 8 102 chr17 61873898 61873939 -23564541 - L1MEd LINE L1 -5160 959 916 1109 165 43 20 chr17 61873953 61874207 -23564273 - L1MB8 LINE L1 0 6178 5919 188 310 14 28 chr17 61875057 61875128 -23563352 + L2 LINE L2 3232 3301 -12 1385 191 31 31 chr17 61875130 61875418 -23563062 + AluJo SINE Alu 1 288 -24 2472 77 0 3 chr17 61875471 61875769 -23562711 - AluY SINE Alu -14 297 1 921 126 7 0 chr17 61875794 61875929 -23562551 + AluSq/x SINE Alu 1 136 -176 762 188 0 0 chr17 61876060 61876188 -23562292 - FLAM_A SINE Alu -5 128 1 1899 121 23 3 chr17 61876190 61876496 -23561984 - L1MB4 LINE L1 -209 5971 5660 527 200 9 0 chr17 61876496 61876601 -23561879 + MER63 DNA MER1_type 951 1056 -6 1404 188 6 97 chr17 61876736 61877066 -23561414 + AluSp SINE Alu 1 300 -13 2265 178 90 38 chr17 61877765 61878098 -23560382 - LTR39 LTR ERV1 -12 771 400 2207 133 7 3 chr17 61878098 61878406 -23560074 + AluSc SINE Alu 1 309 0 2265 178 90 38 chr17 61878406 61878596 -23559884 - LTR39 LTR ERV1 -383 400 221 859 108 0 0 chr17 61878596 61878707 -23559773 + AluSq/x SINE Alu 1 111 -201 410 279 61 30 chr17 61878807 61878972 -23559508 - MLT1A2 LTR MaLR -204 170 1 344 186 14 0 chr17 61879181 61879251 -23559229 + AluJ/FLAM SINE Alu 13 83 -219 247 351 0 0 chr17 61879265 61879339 -23559141 + L2 LINE L2 2596 2669 -645 772 251 110 80 chr17 61879459 61879858 -23558622 - MLT1J LTR MaLR -2 509 99 2125 107 24 0 chr17 61880275 61880565 -23557915 + AluSx SINE Alu 1 297 -15 184 189 54 0 chr17 61880565 61880602 -23557878 + L2 LINE L2 3266 3304 -9 494 167 0 0 chr17 61880643 61880721 -23557759 + FLAM_A SINE Alu 1 78 -54 632 219 56 94 chr17 61880754 61881096 -23557384 - HAL1 LINE L1 -2076 431 103 867 121 0 8 chr17 61881107 61881239 -23557241 - L1PB3 LINE L1 -9 6145 6015 2169 115 0 0 chr17 61881414 61881701 -23556779 + AluSx SINE Alu 1 287 -25 1719 174 3 7 chr17 61881705 61881993 -23556487 + AluJb SINE Alu 18 304 -8 231 146 0 0 chr17 61882314 61882355 -23556125 + (TA)n Simple_repeat Simple_repeat 1 41 0 1852 53 18 4 chr17 61882457 61882683 -23555797 - AluY SINE Alu -82 229 1 6101 101 1 2 chr17 61882683 61883665 -23554815 - L1PA13 LINE L1 -80 6083 5102 180 0 0 0 chr17 61883721 61883741 -23554739 + (A)n Simple_repeat Simple_repeat 1 20 0 2234 117 0 16 chr17 61883745 61883880 -23554600 + AluSx SINE Alu 1 137 -175 2459 77 3 0 chr17 61883880 61884179 -23554301 + AluSp SINE Alu 1 300 -13 2234 117 0 16 chr17 61884179 61884360 -23554120 + AluSx SINE Alu 137 312 0 2343 94 0 13 chr17 61884382 61884691 -23553789 + AluSq SINE Alu 1 305 -8 735 165 39 0 chr17 61884693 61884820 -23553660 + FLAM_C SINE Alu 1 132 -11 2244 122 0 0 chr17 61884921 61885217 -23553263 + AluSx SINE Alu 2 297 -15 195 266 0 0 chr17 61885225 61885289 -23553191 + (TA)n Simple_repeat Simple_repeat 2 65 0 2373 94 0 3 chr17 61886000 61886308 -23552172 + AluSc SINE Alu 1 307 -2 414 200 35 24 chr17 61886998 61887083 -23551397 + LTR39 LTR ERV1 1 86 -697 289 128 0 21 chr17 61887095 61887142 -23551338 + LTR39 LTR ERV1 314 359 -424 1034 134 0 6 chr17 61887142 61887299 -23551181 + AluSg/x SINE Alu 157 312 0 869 95 6 145 chr17 61887303 61887409 -23551071 + LTR39 LTR ERV1 68 141 -642 2245 106 0 0 chr17 61887409 61887701 -23550779 + AluSx SINE Alu 1 292 -20 869 95 6 145 chr17 61887701 61887773 -23550707 + LTR39 LTR ERV1 141 221 -562 2268 105 3 3 chr17 61888087 61888382 -23550098 + AluSq SINE Alu 1 295 -18 250 114 0 0 chr17 61888616 61888660 -23549820 - FAM SINE Alu -2 177 134 1802 151 7 13 chr17 61888686 61888985 -23549495 - AluJo SINE Alu -15 297 1 268 161 16 32 chr17 61888985 61889047 -23549433 - L1M4 LINE L1 -5074 1468 1408 536 222 0 0 chr17 61889053 61889152 -23549328 - FRAM SINE Alu -15 161 63 4599 220 57 47 chr17 61889152 61890288 -23548192 - L1M4 LINE L1 -5223 1319 167 1520 164 89 24 chr17 61890288 61890581 -23547899 - AluJb SINE Alu 0 312 1 4599 220 57 47 chr17 61890581 61890733 -23547747 - L1M4 LINE L1 -6375 167 18 1109 196 31 61 chr17 61890812 61891094 -23547386 - L1ME2 LINE L1 -108 6056 5784 1963 135 17 7 chr17 61891094 61891391 -23547089 - AluSx SINE Alu -12 300 1 1109 196 31 61 chr17 61891391 61891434 -23547046 - L1ME2 LINE L1 -380 5784 5741 2110 128 3 0 chr17 61892400 61892696 -23545784 - AluSx SINE Alu -15 297 1 494 229 100 47 chr17 61892756 61892926 -23545554 - MLT1A2 LTR MaLR -5 369 191 1172 118 0 39 chr17 61893028 61893206 -23545274 + AluSg/x SINE Alu 130 300 -12 2622 102 38 102 chr17 61893206 61893441 -23545039 + Tigger3(Golem) DNA MER2_type 2526 2774 -254 1349 171 28 102 chr17 61893441 61893763 -23544717 - AluJo SINE Alu -14 298 1 2622 102 38 102 chr17 61893763 61893774 -23544706 + Tigger3(Golem) DNA MER2_type 2774 2784 -244 1703 139 32 54 chr17 61893774 61894090 -23544390 - AluJo SINE Alu -1 311 3 2622 102 38 102 chr17 61894090 61894341 -23544139 + Tigger3(Golem) DNA MER2_type 2784 2992 -36 981 233 55 44 chr17 61894478 61894839 -23543641 - HAL1 LINE L1 -190 2317 1953 547 189 46 18 chr17 61894926 61895067 -23543413 - L1ME2 LINE L1 -671 5491 5350 2278 111 0 7 chr17 61895067 61895365 -23543115 - AluSx SINE Alu -16 296 1 1572 147 28 89 chr17 61895371 61895697 -23542783 - AluJo SINE Alu -1 311 6 705 155 9 9 chr17 61895710 61895826 -23542654 - FLAM_C SINE Alu -19 124 9 1859 141 26 38 chr17 61895856 61896169 -23542311 - AluJb SINE Alu -3 309 1 28 29 0 0 chr17 61896426 61896461 -23542019 + AT_rich Low_complexity Low_complexity 1 35 0 892 100 0 0 chr17 61896479 61896599 -23541881 + AluSp/q SINE Alu 178 297 -16 1594 150 45 31 chr17 61896609 61896896 -23541584 + AluJo SINE Alu 1 291 -21 798 160 15 0 chr17 61897208 61897339 -23541141 - FLAM_A SINE Alu 0 133 1 2880 3 0 0 chr17 61897355 61897657 -23540823 + AluYa5 SINE Alu 1 302 -9 321 43 43 22 chr17 61898675 61898752 -23539728 + AluSp/q SINE Alu 239 316 0 254 253 24 36 chr17 61899049 61899132 -23539348 - L1ME LINE L1 -459 5662 5581 237 65 0 0 chr17 61899298 61899329 -23539151 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2189 136 0 3 chr17 61901236 61901545 -23536935 - AluSx SINE Alu -2 310 3 1838 159 0 7 chr17 61901545 61901820 -23536660 - AluSx SINE Alu -37 275 1 2466 139 49 12 chr17 61901917 61902326 -23536154 - MSTB LTR MaLR -2 424 1 184 246 18 18 chr17 61902435 61902492 -23535988 + MIR SINE MIR 98 154 -108 2869 158 30 32 chr17 61902493 61902659 -23535821 + LTR26 LTR ERV1 1 166 -437 2038 82 78 0 chr17 61902659 61902929 -23535551 + AluSx SINE Alu 3 293 -19 2869 158 30 32 chr17 61902929 61903289 -23535191 + LTR26 LTR ERV1 166 526 -77 1002 181 0 6 chr17 61903290 61903456 -23535024 - AluJo SINE Alu -66 246 82 373 213 13 0 chr17 61903456 61903531 -23534949 + LTR26 LTR ERV1 528 603 0 2211 176 11 0 chr17 61905246 61905626 -23532854 - MER66A LTR ERV1 -35 443 60 2170 108 17 0 chr17 61905626 61905913 -23532567 - AluSx SINE Alu -20 292 1 1286 183 8 12 chr17 61905916 61906156 -23532324 - L1MC2 LINE L1 -218 6126 5888 264 167 0 0 chr17 61906156 61906204 -23532276 - Charlie1 DNA MER1_type -528 2233 2186 261 227 0 0 chr17 61906231 61906275 -23532205 - Charlie1 DNA MER1_type -2717 44 1 256 340 91 10 chr17 61906317 61906514 -23531966 - MIR SINE MIR -29 233 21 2252 116 3 0 chr17 61906686 61906987 -23531493 - AluSq SINE Alu -11 302 1 24 53 0 0 chr17 61907041 61907079 -23531401 + AT_rich Low_complexity Low_complexity 1 38 0 933 77 0 0 chr17 61907106 61907223 -23531257 - AluSg/x SINE Alu -15 297 181 248 265 20 29 chr17 61907874 61907976 -23530504 + CT-rich Low_complexity Low_complexity 1 101 0 416 128 11 43 chr17 61908014 61908108 -23530372 - AluSp/q SINE Alu -2 311 221 1984 129 4 0 chr17 61908212 61908492 -23529988 - AluSx SINE Alu -31 281 1 225 0 0 0 chr17 61908492 61908517 -23529963 + (T)n Simple_repeat Simple_repeat 1 25 0 2243 124 0 0 chr17 61908842 61909149 -23529331 - AluSx SINE Alu -5 307 1 347 235 38 64 chr17 61909243 61909425 -23529055 + MIR SINE MIR 23 203 -59 202 351 122 8 chr17 61909827 61909958 -23528522 - L2 LINE L2 -4 3268 3123 852 185 48 0 chr17 61910244 61910390 -23528090 + AluJb SINE Alu 55 207 -105 2395 103 52 9 chr17 61910391 61910740 -23527740 - THE1B LTR MaLR 0 364 1 7792 111 15 2 chr17 61910742 61911822 -23526658 - THE1B-int LTR MaLR -2 1578 485 301 82 0 21 chr17 61912458 61912514 -23525966 - THE1B-int LTR MaLR -1087 493 448 2100 90 48 7 chr17 61914437 61914726 -23523754 - AluSg SINE Alu -9 301 1 515 282 6 19 chr17 61914727 61914883 -23523597 + L2 LINE L2 3155 3308 -5 350 270 29 29 chr17 61914907 61915044 -23523436 - MIR SINE MIR -55 153 17 2220 112 10 0 chr17 61915141 61915444 -23523036 - AluSx SINE Alu -6 306 1 2421 54 24 0 chr17 61915712 61916007 -23522473 - AluY SINE Alu -9 302 1 1954 90 0 4 chr17 61916007 61916345 -23522135 - L1P2 LINE L1 -665 5490 5156 1790 156 31 81 chr17 61916571 61916851 -23521629 + MER2 DNA MER2_type 6 299 -46 1792 175 10 0 chr17 61916851 61917143 -23521337 - AluSx SINE Alu -17 295 1 1454 196 34 10 chr17 61917149 61917445 -23521035 - AluJo SINE Alu -9 303 1 1790 156 31 81 chr17 61917445 61917515 -23520965 + MER2 DNA MER2_type 304 345 0 2331 74 0 17 chr17 61917545 61917844 -23520636 + AluY SINE Alu 1 294 -17 681 195 0 0 chr17 61917929 61918052 -23520428 - FLAM_A SINE Alu -10 123 1 2157 107 33 0 chr17 61918106 61918226 -23520254 + AluSp SINE Alu 1 116 -197 2472 80 0 0 chr17 61918226 61918525 -23519955 + AluSg SINE Alu 12 310 0 2157 107 33 0 chr17 61918525 61918704 -23519776 + AluSp SINE Alu 116 310 -3 27 49 0 0 chr17 61918888 61918929 -23519551 + AT_rich Low_complexity Low_complexity 1 41 0 2111 112 0 11 chr17 61919160 61919473 -23519007 - AluSg SINE Alu 0 310 1 1802 166 14 0 chr17 61919997 61920281 -23518199 + AluSx SINE Alu 2 289 -23 1939 155 42 20 chr17 61920326 61920680 -23517800 + MLT1A1 LTR MaLR 1 362 -3 1281 158 117 53 chr17 61920876 61921141 -23517339 + AluJo SINE Alu 4 285 -27 476 52 0 0 chr17 61921141 61921199 -23517281 - Alu SINE Alu -17 295 238 2303 100 3 3 chr17 61921199 61921499 -23516981 - AluSx SINE Alu -12 300 1 26 0 0 0 chr17 61921501 61921527 -23516953 + AT_rich Low_complexity Low_complexity 1 26 0 730 170 7 37 chr17 61921527 61921662 -23516818 - FLAM_C SINE Alu -11 132 2 253 185 36 0 chr17 61923058 61923130 -23515350 + L1MC4a LINE L1 5532 5606 -577 2152 133 0 0 chr17 61923516 61923825 -23514655 - AluSx SINE Alu -3 309 1 2149 104 0 51 chr17 61923976 61924292 -23514188 - AluSx SINE Alu -9 303 4 803 164 31 0 chr17 61924501 61924629 -23513851 + FLAM_A SINE Alu 1 132 -1 35 24 0 0 chr17 61925040 61925082 -23513398 + AT_rich Low_complexity Low_complexity 1 42 0 2394 95 0 0 chr17 61925121 61925425 -23513055 - AluSx SINE Alu -8 304 1 3132 168 60 32 chr17 61925428 61925538 -23512942 - L1MB2 LINE L1 -43 6128 6022 3209 105 78 76 chr17 61925538 61925664 -23512816 - MER1A DNA MER1_type -2173 527 403 1758 154 25 7 chr17 61925664 61925943 -23512537 - AluJb SINE Alu -28 284 1 3209 105 78 76 chr17 61925943 61926342 -23512138 - MER1A DNA MER1_type -2297 403 1 3132 168 60 32 chr17 61926342 61926584 -23511896 - L1MB2 LINE L1 -149 6022 5788 1805 109 18 39 chr17 61926584 61926869 -23511611 - AluJb SINE Alu -33 279 1 3132 168 60 32 chr17 61926869 61927171 -23511309 - L1MB2 LINE L1 -383 5788 5455 243 319 103 26 chr17 61927690 61927806 -23510674 - MIR3 SINE MIR -39 169 45 1280 80 5 27 chr17 61928950 61929137 -23509343 + AluSq SINE Alu 117 299 -14 2095 100 0 65 chr17 61933325 61933634 -23504846 + AluSx SINE Alu 1 289 -23 2404 213 100 28 chr17 61933658 61934409 -23504071 + L1MC4a LINE L1 5679 6483 -1325 361 221 71 88 chr17 61934398 61934474 -23504006 + L1MB4 LINE L1 4827 4903 -1243 * 1983 138 0 16 chr17 61934474 61934785 -23503695 + AluSx SINE Alu 1 306 -6 361 221 71 88 chr17 61934785 61934934 -23503546 + L1MB4 LINE L1 4903 5048 -1098 1027 174 5 11 chr17 61935240 61935424 -23503056 + Tigger6 DNA MER2_type 1414 1596 -1 2204 112 0 13 chr17 61935632 61935946 -23502534 - AluSx SINE Alu -2 310 1 1054 178 0 18 chr17 61936079 61936248 -23502232 - FRAM SINE Alu 0 166 1 32 43 0 0 chr17 61936257 61936303 -23502177 + AT_rich Low_complexity Low_complexity 1 46 0 31 0 0 0 chr17 61936452 61936483 -23501997 + AT_rich Low_complexity Low_complexity 1 31 0 2270 107 10 3 chr17 61936550 61936858 -23501622 - AluSx SINE Alu 0 312 3 923 120 8 8 chr17 61937218 61937351 -23501129 + FLAM_C SINE Alu 1 133 -10 4829 134 51 38 chr17 61937939 61938989 -23499491 + L1MB4 LINE L1 5128 6179 -1 317 143 20 0 chr17 61940255 61940304 -23498176 + 5S rRNA rRNA 1 50 -71 1710 158 0 4 chr17 61940324 61940590 -23497890 + AluJb SINE Alu 1 265 -47 1685 170 3 10 chr17 61941196 61941496 -23496984 + AluJo SINE Alu 1 298 -14 914 225 64 8 chr17 61941783 61942019 -23496461 - L1ME3 LINE L1 -20 6142 5894 859 188 106 6 chr17 61942277 61942437 -23496043 + AluJo SINE Alu 7 182 -130 308 239 28 0 chr17 61942467 61942538 -23495942 + HAL1 LINE L1 2435 2507 0 21 57 0 0 chr17 61942609 61942644 -23495836 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr17 61942820 61942842 -23495638 + AT_rich Low_complexity Low_complexity 1 22 0 1976 97 42 10 chr17 61943006 61943294 -23495186 + AluSc SINE Alu 1 297 -12 262 247 43 54 chr17 61943450 61943543 -23494937 - L2 LINE L2 0 3313 3222 203 337 54 11 chr17 61943619 61943711 -23494769 - L2 LINE L2 -239 3074 2979 364 327 188 58 chr17 61943829 61944260 -23494220 - L2 LINE L2 -443 2871 2385 2321 84 7 3 chr17 61944566 61944863 -23493617 + AluSp SINE Alu 1 298 -15 854 157 0 15 chr17 61944882 61945016 -23493464 + AluJo/FLAM SINE Alu 1 132 -170 1089 127 6 30 chr17 61945016 61945028 -23493452 + AluSg/x SINE Alu 132 143 -167 2764 106 53 14 chr17 61945028 61945461 -23493019 + LTR7 LTR ERV1 1 450 0 1089 127 6 30 chr17 61945461 61945614 -23492866 + AluSg/x SINE Alu 143 293 -17 2099 118 16 19 chr17 61945616 61945929 -23492551 + AluSq SINE Alu 1 312 -1 27 0 0 0 chr17 61946414 61946441 -23492039 + AT_rich Low_complexity Low_complexity 1 27 0 269 202 17 67 chr17 61947552 61947671 -23490809 - Charlie7 DNA MER1_type -52 2560 2448 1315 152 117 52 chr17 61947721 61948030 -23490450 - MER47A DNA MER2_type -11 355 27 194 286 0 0 chr17 61948114 61948163 -23490317 + L2 LINE L2 3222 3270 -2 315 0 0 0 chr17 61948346 61948381 -23490099 + (CA)n Simple_repeat Simple_repeat 2 36 0 2197 95 7 3 chr17 61949318 61949612 -23488868 + AluSx SINE Alu 1 295 -17 2447 41 3 3 chr17 61949791 61950082 -23488398 + AluY SINE Alu 1 291 -20 296 287 19 19 chr17 61952195 61952303 -23486177 + C-rich Low_complexity Low_complexity 2 109 0 23 0 0 0 chr17 61952470 61952493 -23485987 + GC_rich Low_complexity Low_complexity 1 23 0 1439 205 53 6 chr17 61953009 61953351 -23485129 - L1MB3 LINE L1 -3 6180 5823 705 190 37 25 chr17 61953369 61953532 -23484948 + L1MB3 LINE L1 5650 5814 -366 2416 74 3 0 chr17 61953740 61954038 -23484442 - AluSp SINE Alu -10 303 5 1411 134 159 64 chr17 61954622 61954793 -23483687 - MER7A DNA MER2_type -2696 342 189 2197 96 0 0 chr17 61954793 61955100 -23483380 - AluSx SINE Alu 0 309 3 1411 134 159 64 chr17 61955100 61955241 -23483239 - MER7A DNA MER2_type -2849 189 1 2107 127 16 13 chr17 61956128 61956435 -23482045 - AluJb SINE Alu -4 308 1 414 218 11 58 chr17 61956604 61956691 -23481789 + AluJ/FLAM SINE Alu 2 84 -228 1761 138 4 0 chr17 61957439 61957693 -23480787 - AluJo SINE Alu -30 282 28 1573 181 3 93 chr17 61958141 61958473 -23480007 + AluJo SINE Alu 1 302 0 1682 171 7 11 chr17 61958777 61959064 -23479416 + AluJo SINE Alu 24 309 -3 1789 255 165 43 chr17 61959199 61959431 -23479049 - L2 LINE L2 0 3313 3111 1781 153 0 28 chr17 61959431 61959719 -23478761 + AluJo SINE Alu 1 280 -32 186 43 0 0 chr17 61959720 61959743 -23478737 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1789 255 165 43 chr17 61959743 61960031 -23478449 - L2 LINE L2 -202 3111 2860 2173 127 0 0 chr17 61960031 61960323 -23478157 - AluSx SINE Alu -20 292 1 1789 255 165 43 chr17 61960323 61960795 -23477685 - L2 LINE L2 -453 2860 2195 863 171 5 112 chr17 61960801 61960953 -23477527 + AluSx SINE Alu 5 131 -181 1628 151 11 25 chr17 61960953 61961232 -23477248 + AluJb SINE Alu 20 294 -18 863 171 5 112 chr17 61961232 61961284 -23477196 + AluSx SINE Alu 131 187 -125 1316 59 0 12 chr17 61961285 61961454 -23477026 + AluY SINE Alu 139 305 -6 986 103 0 22 chr17 61961654 61961790 -23476690 + AluSq/x SINE Alu 1 133 -180 2169 137 10 0 chr17 61962299 61962606 -23475874 - AluJb SINE Alu -2 310 1 1262 247 106 82 chr17 61962717 61963079 -23475401 - MLT1G1 LTR MaLR -7 588 211 2418 58 0 20 chr17 61963079 61963374 -23475106 - AluSc SINE Alu -20 289 1 1262 247 106 82 chr17 61963374 61963484 -23474996 - MLT1G1 LTR MaLR -384 211 105 243 302 0 19 chr17 61963675 61963781 -23474699 + L1MC4 LINE L1 7815 7918 -124 1960 158 3 3 chr17 61963816 61964127 -23474353 + AluJb SINE Alu 1 311 -1 396 235 41 0 chr17 61964163 61964261 -23474219 + MLT1G1 LTR MaLR 98 199 -396 568 151 31 64 chr17 61964299 61964436 -23474044 + L1MC4 LINE L1 7671 8042 0 1782 122 52 7 chr17 61964956 61965242 -23473238 + AluSx SINE Alu 5 303 -9 2027 140 3 10 chr17 61965255 61965563 -23472917 - AluSx SINE Alu -6 306 1 1423 177 4 8 chr17 61965589 61965837 -23472643 + AluJb SINE Alu 52 298 -14 1690 183 7 13 chr17 61965931 61966237 -23472243 + AluJb SINE Alu 1 304 -8 1684 148 54 4 chr17 61966260 61966537 -23471943 - AluSx SINE Alu -21 291 1 2345 117 0 0 chr17 61966563 61966871 -23471609 - AluSg SINE Alu -1 309 2 222 37 0 0 chr17 61966871 61966898 -23471582 + (TTTC)n Simple_repeat Simple_repeat 3 29 0 1020 339 66 18 chr17 61966962 61967690 -23470790 + L1MEc LINE L1 29 791 -5605 1311 120 0 0 chr17 61967690 61967865 -23470615 + AluSg/x SINE Alu 131 305 -5 2281 113 0 0 chr17 61967874 61968183 -23470297 + AluSx SINE Alu 1 309 -3 759 189 207 0 chr17 61968195 61968412 -23470068 + L1MEc LINE L1 797 1058 -5338 2095 100 0 65 chr17 61969192 61969501 -23468979 + AluSx SINE Alu 1 289 -23 1939 233 95 35 chr17 61969525 61970285 -23468195 + L1MC4a LINE L1 5679 6483 -1325 2260 110 0 3 chr17 61970350 61970651 -23467829 + AluSg SINE Alu 1 300 -10 1896 140 22 32 chr17 61970680 61970995 -23467485 + AluJb SINE Alu 1 312 0 463 257 48 22 chr17 61970998 61971205 -23467275 + L1ME3A LINE L1 5152 5369 -791 494 236 214 27 chr17 61971218 61971438 -23467042 + L1ME3A LINE L1 5713 5973 -197 26 30 0 0 chr17 61971623 61971656 -23466824 + AT_rich Low_complexity Low_complexity 1 33 0 2217 121 0 16 chr17 61971659 61971972 -23466508 - AluSx SINE Alu -4 308 1 1695 159 3 47 chr17 61972832 61973133 -23465347 + AluJo SINE Alu 1 288 -24 246 259 0 0 chr17 61973208 61973266 -23465214 - MIR SINE MIR -3 259 202 22 0 0 0 chr17 61973340 61973362 -23465118 + AT_rich Low_complexity Low_complexity 1 22 0 2051 116 28 3 chr17 61973394 61973678 -23464802 - AluSx SINE Alu -21 291 1 1791 167 13 3 chr17 61973730 61974029 -23464451 - AluJb SINE Alu -10 302 1 24 0 0 0 chr17 61974039 61974063 -23464417 + AT_rich Low_complexity Low_complexity 1 24 0 1595 193 35 0 chr17 61974071 61974356 -23464124 - AluJo SINE Alu -17 295 1 226 275 112 28 chr17 61975196 61975374 -23463106 + L1ME LINE L1 5586 5778 -343 269 196 137 69 chr17 61975475 61975577 -23462903 + HAL1b LINE L1 1204 1312 -36 2286 112 0 0 chr17 61975977 61976271 -23462209 - AluSx SINE Alu -18 294 1 298 189 245 9 chr17 61976338 61976444 -23462036 - L1ME4a LINE L1 0 6121 5991 21 36 0 0 chr17 61976541 61976569 -23461911 + GC_rich Low_complexity Low_complexity 1 28 0 6429 73 12 65 chr17 61976620 61978634 -23459846 + SVA Other Other 393 1386 0 789 275 187 4 chr17 61978698 61978949 -23459531 + MLT1K LTR MaLR 2 298 -290 1669 156 152 69 chr17 61978954 61979160 -23459320 + MLT1F1 LTR MaLR 97 285 -282 1951 167 10 0 chr17 61979160 61979466 -23459014 - AluJb SINE Alu -3 309 1 1669 156 152 69 chr17 61979466 61979638 -23458842 + MLT1F1 LTR MaLR 285 519 -48 1940 166 0 0 chr17 61979638 61979945 -23458535 - AluSx SINE Alu 0 307 1 1669 156 152 69 chr17 61979945 61979999 -23458481 + MLT1F1 LTR MaLR 519 567 0 1852 169 0 0 chr17 61980248 61980543 -23457937 + AluJb SINE Alu 1 295 -17 648 202 0 9 chr17 61980870 61980979 -23457501 - FRAM SINE Alu -72 104 1 434 293 104 6 chr17 61980979 61981143 -23457337 + Charlie8 DNA MER1_type 86 265 -2152 2156 138 0 0 chr17 61981425 61981773 -23456707 - AluJb SINE Alu 0 348 1 2303 106 0 3 chr17 61982053 61982364 -23456116 - AluSg SINE Alu 0 310 1 2366 90 3 0 chr17 61982366 61982667 -23455813 - AluSc SINE Alu -7 302 1 389 212 0 12 chr17 61983279 61983364 -23455116 + L2 LINE L2 2451 2534 -780 763 112 19 9 chr17 61983370 61983477 -23455003 + AluJb SINE Alu 4 111 -201 1111 184 163 16 chr17 61983485 61983885 -23454595 - LTR18B LTR ERVL -63 551 1 538 163 0 0 chr17 61983885 61983971 -23454509 + FLAM_C SINE Alu 53 138 -5 675 245 68 12 chr17 61983989 61984238 -23454242 + HAL1 LINE L1 1686 1948 -559 3746 117 79 22 chr17 61984245 61984826 -23453654 - LTR18B LTR ERVL 0 614 1 1878 174 10 0 chr17 61985029 61985328 -23453152 - HERVL18 LTR ERVL -2556 3491 3190 1053 84 7 0 chr17 61985328 61985470 -23453010 + AluSg/x SINE Alu 170 312 0 372 105 38 4 chr17 61985474 61985585 -23452895 - HERVL18 LTR ERVL -3768 2279 2119 * 1121 186 20 7 chr17 61985584 61985939 -23452541 - HERVL18 LTR ERVL -4237 1810 1388 881 222 12 0 chr17 61985967 61986138 -23452342 - HERVL18 LTR ERVL -5381 666 494 * 1586 185 3 11 chr17 61986123 61986410 -23452070 - HERVL18 LTR ERVL -5744 303 19 3672 125 78 14 chr17 61986431 61987008 -23451472 - LTR18B LTR ERVL 0 614 1 446 228 103 0 chr17 61987015 61987160 -23451320 + HAL1 LINE L1 1943 2102 -405 2122 104 13 30 chr17 61987187 61987486 -23450994 + AluSq SINE Alu 1 294 -19 265 197 0 16 chr17 61987500 61987561 -23450919 + THE1B LTR MaLR 195 254 -110 31 0 0 0 chr17 61988055 61988086 -23450394 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 61988155 61988176 -23450304 + AT_rich Low_complexity Low_complexity 1 21 0 1365 108 84 117 chr17 61988823 61989156 -23449324 - MER33 DNA MER1_type -2 322 1 1140 154 0 6 chr17 61989164 61989339 -23449141 + MER5A DNA MER1_type 1 174 -15 604 184 0 0 chr17 61989518 61989616 -23448864 - LTR32 LTR ERVL 0 471 374 993 142 0 0 chr17 61989623 61989764 -23448716 - AluJb SINE Alu -16 296 156 23 0 0 0 chr17 61989776 61989799 -23448681 + AT_rich Low_complexity Low_complexity 1 23 0 1797 132 14 35 chr17 61989828 61989923 -23448557 - LTR32 LTR ERVL -80 391 296 2343 100 0 3 chr17 61989923 61990222 -23448258 + AluSx SINE Alu 1 298 -14 1797 132 14 35 chr17 61990222 61990413 -23448067 - LTR32 LTR ERVL -175 296 111 2055 132 7 0 chr17 61990771 61991058 -23447422 - AluSx SINE Alu -23 289 1 771 143 241 0 chr17 61991453 61991586 -23446894 - AluSg/x SINE Alu -16 294 130 245 27 54 0 chr17 61991586 61991623 -23446857 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2242 87 0 0 chr17 61991623 61991900 -23446580 - AluSc SINE Alu -30 279 3 269 286 0 0 chr17 61991929 61991985 -23446495 - L2 LINE L2 -22 3250 3195 504 296 11 116 chr17 61992245 61992364 -23446116 - L2 LINE L2 -384 2930 2800 1521 164 3 35 chr17 61992364 61992676 -23445804 + AluJo SINE Alu 1 302 -10 2326 95 13 0 chr17 61992676 61992982 -23445498 + AluSq SINE Alu 1 310 -3 504 296 11 116 chr17 61992982 61993044 -23445436 - L2 LINE L2 -513 2801 2734 2313 82 0 0 chr17 61993044 61993335 -23445145 + AluY SINE Alu 1 291 -20 504 296 11 116 chr17 61993335 61993523 -23444957 - L2 LINE L2 -580 2734 2598 1042 179 60 5 chr17 61993851 61994052 -23444428 - AluSg/x SINE Alu -25 285 74 325 307 119 44 chr17 61994093 61994388 -23444092 - L1 LINE L1 -1102 5044 4725 588 209 241 5 chr17 61994712 61994899 -23443581 + MIR SINE MIR 2 232 -30 2297 88 7 0 chr17 61994972 61995266 -23443214 + AluSq SINE Alu 1 296 -17 933 101 0 0 chr17 61995362 61995481 -23442999 + AluSc SINE Alu 16 134 -175 464 256 99 6 chr17 61996537 61996709 -23441771 + LTR16C LTR ERVL 298 485 -6 2122 132 10 0 chr17 61996790 61997086 -23441394 + AluSx SINE Alu 1 299 -13 707 306 87 49 chr17 61997133 61997502 -23440978 + L2 LINE L2 2839 3221 -92 1756 161 3 20 chr17 61997534 61997826 -23440654 + AluJo SINE Alu 1 287 -25 2714 103 99 14 chr17 61998253 61998755 -23439725 + LTR35 LTR ERV1 1 618 0 685 175 0 0 chr17 61998755 61998869 -23439611 + L1MD3 LINE L1 7714 7827 -168 2290 105 0 3 chr17 61998988 61999293 -23439187 + AluSq SINE Alu 3 306 -7 1131 201 75 53 chr17 61999517 61999835 -23438645 + MLT1D LTR MaLR 1 325 -180 2602 221 134 118 chr17 61999835 62000124 -23438356 - L1M4 LINE L1 -4842 1700 1417 1577 154 73 4 chr17 62000124 62000384 -23438096 - AluJo SINE Alu -29 283 6 2602 221 134 118 chr17 62000384 62000400 -23438080 - L1M4 LINE L1 -5125 1417 1403 1868 172 0 0 chr17 62000400 62000691 -23437789 - AluJo SINE Alu -21 291 1 2602 221 134 118 chr17 62000691 62000857 -23437623 - L1M4 LINE L1 -5139 1403 1241 2448 89 3 0 chr17 62000857 62001161 -23437319 - AluSp SINE Alu -8 305 1 2602 221 134 118 chr17 62001161 62001273 -23437207 - L1M4 LINE L1 -5301 1241 1132 2632 61 0 0 chr17 62001273 62001584 -23436896 - AluSq SINE Alu 0 313 3 2602 221 134 118 chr17 62001584 62002632 -23435848 - L1M4 LINE L1 -5410 1132 40 2302 105 0 10 chr17 62002687 62003000 -23435480 - AluSx SINE Alu -2 310 1 2598 55 0 6 chr17 62003018 62003330 -23435150 - AluY SINE Alu -1 310 1 2123 60 102 7 chr17 62003341 62003625 -23434855 - AluY SINE Alu 0 311 1 183 80 0 0 chr17 62003934 62003959 -23434521 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 248 159 0 0 chr17 62004043 62004087 -23434393 - Alu SINE Alu -2 131 88 25 31 0 0 chr17 62004131 62004163 -23434317 + AT_rich Low_complexity Low_complexity 1 32 0 2103 78 0 0 chr17 62004173 62004429 -23434051 - AluSc SINE Alu -53 256 1 535 311 122 49 chr17 62004444 62004848 -23433632 - L1MEd LINE L1 -5326 793 349 2261 109 3 0 chr17 62004848 62005150 -23433330 - AluSx SINE Alu -9 303 1 535 311 122 49 chr17 62005150 62005214 -23433266 - L1MEd LINE L1 -5770 349 291 502 247 99 67 chr17 62005229 62005452 -23433028 - L1MEd LINE L1 -5879 240 11 1401 188 85 4 chr17 62005561 62005832 -23432648 - AluJo SINE Alu -16 296 4 198 0 0 0 chr17 62006357 62006379 -23432101 + (TAA)n Simple_repeat Simple_repeat 1 22 0 2121 119 0 3 chr17 62006450 62006744 -23431736 + AluSx SINE Alu 1 293 -19 327 154 71 0 chr17 62007855 62007928 -23430552 - FLAM_A SINE Alu -6 127 70 2483 62 7 3 chr17 62008027 62008332 -23430148 + AluY SINE Alu 1 306 -5 23 54 0 0 chr17 62008369 62008406 -23430074 + AT_rich Low_complexity Low_complexity 1 37 0 673 140 0 28 chr17 62008746 62008853 -23429627 + FLAM_C SINE Alu 30 133 -10 272 340 20 0 chr17 62009721 62009821 -23428659 + L2 LINE L2 2914 3015 -257 471 189 181 24 chr17 62009888 62010015 -23428465 - MIR SINE MIR -14 248 102 263 287 111 0 chr17 62010010 62010118 -23428362 - L2 LINE L2 -36 3277 3158 * 1324 173 100 19 chr17 62010125 62010413 -23428067 + AluJb SINE Alu 1 309 0 667 279 51 70 chr17 62010416 62010732 -23427748 + MLT1I LTR MaLR 93 402 -7 807 160 32 0 chr17 62010947 62011072 -23427408 + FLAM_C SINE Alu 2 130 -13 1569 171 34 24 chr17 62011199 62011492 -23426988 - AluJb SINE Alu -16 296 1 21 0 0 0 chr17 62012047 62012068 -23426412 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr17 62012508 62012532 -23425948 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 580 319 73 63 chr17 62012899 62013387 -23425093 - L2 LINE L2 -89 3224 2697 1023 184 84 0 chr17 62013387 62013577 -23424903 + MER3 DNA MER1_type 3 208 -1 580 319 73 63 chr17 62013577 62013678 -23424802 - L2 LINE L2 -616 2697 2599 2080 85 15 15 chr17 62014432 62014704 -23423776 + AluSc SINE Alu 28 299 -10 3756 149 80 94 chr17 62014777 62015618 -23422862 - L1MB4 LINE L1 0 6180 5329 1824 153 7 29 chr17 62015618 62015925 -23422555 - AluJo SINE Alu -12 300 1 3756 149 80 94 chr17 62015925 62015957 -23422523 - L1MB4 LINE L1 -851 5329 5298 1554 87 5 0 chr17 62015957 62016152 -23422328 - AluSq SINE Alu -33 280 85 2239 106 0 20 chr17 62016153 62016456 -23422024 - AluSx SINE Alu -15 297 1 3756 149 80 94 chr17 62016456 62016642 -23421838 - L1MB4 LINE L1 -881 5299 5121 3233 223 30 60 chr17 62016628 62017203 -23421277 - L1MB4 LINE L1 -1945 4201 3667 * 2270 110 3 0 chr17 62017203 62017511 -23420969 + AluSq SINE Alu 1 309 -4 3233 223 30 60 chr17 62017511 62017936 -23420544 - L1MB4 LINE L1 -2479 3667 3231 253 336 74 13 chr17 62018002 62018151 -23420329 + MLT1L LTR MaLR 352 509 -106 22 25 0 25 chr17 62018877 62018894 -23419586 + AT_rich Low_complexity Low_complexity 1 17 -22 884 143 8 15 chr17 62018894 62019027 -23419453 + FLAM_C SINE Alu 1 132 -1 22 25 0 25 chr17 62019027 62019049 -23419431 + AT_rich Low_complexity Low_complexity 17 39 0 21 36 0 0 chr17 62019062 62019090 -23419390 + AT_rich Low_complexity Low_complexity 1 28 0 2245 101 7 13 chr17 62019527 62019835 -23418645 - AluSq SINE Alu -7 306 1 370 152 45 0 chr17 62019956 62020022 -23418458 - Tigger4(Zombi) DNA MER2_type 0 2731 2663 243 200 0 0 chr17 62019998 62020038 -23418442 - Tigger4(Zombi) DNA MER2_type -2691 40 1 * 37 52 0 0 chr17 62020248 62020306 -23418174 + AT_rich Low_complexity Low_complexity 1 58 0 2227 105 13 3 chr17 62020308 62020614 -23417866 + AluY SINE Alu 1 309 -2 225 94 0 0 chr17 62020623 62020655 -23417825 + (ACATG)n Simple_repeat Simple_repeat 5 36 0 762 157 0 0 chr17 62020657 62020765 -23417715 - FLAM_C SINE Alu -35 108 1 378 0 0 0 chr17 62021009 62021051 -23417429 + (CA)n Simple_repeat Simple_repeat 2 43 0 30 27 0 0 chr17 62021865 62021902 -23416578 + AT_rich Low_complexity Low_complexity 1 37 0 681 193 118 0 chr17 62022119 62022238 -23416242 - AluJo SINE Alu -178 134 2 21 0 0 0 chr17 62023032 62023053 -23415427 + AT_rich Low_complexity Low_complexity 1 21 0 788 180 8 0 chr17 62023219 62023347 -23415133 + FLAM_C SINE Alu 1 129 -4 23 0 0 0 chr17 62023348 62023371 -23415109 + AT_rich Low_complexity Low_complexity 1 23 0 335 197 49 0 chr17 62023890 62023951 -23414529 + L2 LINE L2 3208 3271 -1 2174 99 45 3 chr17 62024000 62024292 -23414188 + AluSx SINE Alu 1 304 -8 277 345 138 6 chr17 62025221 62025395 -23413085 - MIR SINE MIR -58 204 8 1337 150 0 18 chr17 62025531 62025757 -23412723 + AluJb SINE Alu 81 302 -10 897 235 123 29 chr17 62026053 62026645 -23411835 + LTR50 LTR ERVL 1 684 -111 879 155 0 8 chr17 62026669 62026798 -23411682 + FLAM_C SINE Alu 1 128 -5 2338 79 10 0 chr17 62027249 62027541 -23410939 - AluSp SINE Alu -18 295 1 35628 76 12 9 chr17 62027813 62028759 -23409721 - L1PA6 LINE L1 -4 6150 5209 2422 78 0 0 chr17 62028759 62029053 -23409427 - AluY SINE Alu -17 294 1 35628 76 12 9 chr17 62029053 62033688 -23404792 - L1PA6 LINE L1 -945 5209 550 1197 179 44 4 chr17 62033705 62033960 -23404520 + L1MB8 LINE L1 5822 6089 -89 284 27 0 27 chr17 62035531 62035568 -23402912 - AluY SINE Alu -254 47 12 1075 274 111 18 chr17 62035601 62036098 -23402382 - L1M4 LINE L1 -867 5279 4737 273 167 37 0 chr17 62036177 62036231 -23402249 - L1M LINE L1 -763 5399 5344 1334 209 81 7 chr17 62036368 62036651 -23401829 - AluSx SINE Alu -8 304 1 444 37 0 0 chr17 62036651 62036705 -23401775 + (TG)n Simple_repeat Simple_repeat 2 55 0 625 182 0 0 chr17 62036719 62036807 -23401673 - AluJ/FLAM SINE Alu -223 89 2 225 0 0 0 chr17 62036808 62036833 -23401647 + (TG)n Simple_repeat Simple_repeat 1 25 0 1463 162 68 8 chr17 62036842 62037108 -23401372 - AluJo SINE Alu -30 282 1 1640 180 0 14 chr17 62037278 62037567 -23400913 - AluJo SINE Alu -27 285 1 711 188 38 30 chr17 62037630 62037763 -23400717 + AluJo SINE Alu 2 135 -177 925 189 0 12 chr17 62037816 62037985 -23400495 + AluJo SINE Alu 132 298 -14 270 73 0 0 chr17 62038086 62038127 -23400353 - Alu SINE Alu 0 302 262 2186 83 41 3 chr17 62038920 62039210 -23399270 + AluSq SINE Alu 1 301 -12 318 286 20 0 chr17 62039226 62039324 -23399156 - L1ME4a LINE L1 -76 6045 5946 198 0 0 0 chr17 62039338 62039360 -23399120 + (A)n Simple_repeat Simple_repeat 1 22 0 1467 196 48 14 chr17 62039363 62039654 -23398826 + AluJb SINE Alu 1 301 -11 763 203 0 0 chr17 62039665 62039798 -23398682 + FLAM_C SINE Alu 1 133 0 277 243 75 70 chr17 62039889 62040103 -23398377 - L1ME4a LINE L1 -2002 5806 5592 1932 152 3 3 chr17 62040149 62040445 -23398035 - AluSx SINE Alu -16 296 1 2305 101 3 0 chr17 62040454 62040752 -23397728 - AluSc SINE Alu -9 300 2 1540 171 25 21 chr17 62041328 62041614 -23396866 - AluJo SINE Alu -21 291 5 1624 193 3 16 chr17 62041627 62041932 -23396548 - AluJo SINE Alu -6 306 6 1325 195 95 91 chr17 62042066 62042229 -23396251 - L1MC5 LINE L1 -49 7912 7751 2214 114 13 0 chr17 62042229 62042537 -23395943 - AluSp SINE Alu -1 312 1 1325 195 95 91 chr17 62042537 62042665 -23395815 - L1MC5 LINE L1 -210 7751 7625 2246 103 3 0 chr17 62042665 62042956 -23395524 - AluSg SINE Alu -16 294 3 1325 195 95 91 chr17 62042956 62043170 -23395310 - L1MC5 LINE L1 -336 7625 7404 1277 126 0 10 chr17 62043897 62044095 -23394385 + AluJb SINE Alu 115 310 -2 918 204 13 0 chr17 62044106 62044263 -23394217 + FRAM SINE Alu 1 159 -7 1436 190 0 0 chr17 62044536 62044778 -23393702 + AluSx SINE Alu 1 242 -70 635 104 87 104 chr17 62044879 62044994 -23393486 - AluSq/x SINE Alu -197 115 3 585 161 0 0 chr17 62045025 62045112 -23393368 + FRAM SINE Alu 72 158 -18 2185 117 0 3 chr17 62045120 62045418 -23393062 + AluSg SINE Alu 1 297 -13 2158 131 0 6 chr17 62045508 62045820 -23392660 + AluSx SINE Alu 1 310 -2 2029 131 3 0 chr17 62045933 62046250 -23392230 + AluSx SINE Alu 1 318 0 1027 219 53 47 chr17 62046269 62046570 -23391910 + L1MD2 LINE L1 6052 6354 -5 1644 158 59 33 chr17 62046582 62046803 -23391677 + AluJo SINE Alu 1 215 -97 2334 110 53 34 chr17 62046803 62047158 -23391322 + THE1B LTR MaLR 1 362 -2 12212 102 4 12 chr17 62047160 62047591 -23390889 + THE1B-int LTR MaLR 1 434 -1146 1998 123 3 69 chr17 62047591 62047923 -23390557 - AluSq SINE Alu -3 310 1 12212 102 4 12 chr17 62047923 62049084 -23389396 + THE1B-int LTR MaLR 434 1580 0 2341 126 42 25 chr17 62049084 62049442 -23389038 + THE1B LTR MaLR 1 364 0 1644 158 59 33 chr17 62049442 62049520 -23388960 + AluJo SINE Alu 214 312 0 927 155 0 0 chr17 62049682 62049811 -23388669 - FLAM_C SINE Alu -4 129 1 1954 141 20 7 chr17 62049811 62050115 -23388365 - AluSx SINE Alu -4 308 1 352 279 57 7 chr17 62050149 62050289 -23388191 - MIR SINE MIR -56 206 60 563 271 79 19 chr17 62050292 62050506 -23387974 + MIR SINE MIR 2 228 -34 704 167 28 38 chr17 62051083 62051152 -23387328 + L1MB7 LINE L1 5282 5350 -820 2252 113 0 13 chr17 62051152 62051463 -23387017 - AluSc SINE Alu -2 307 1 704 167 28 38 chr17 62051463 62051604 -23386876 + L1MB7 LINE L1 5350 5476 -694 815 181 19 25 chr17 62051605 62051822 -23386658 - FRAM SINE Alu 0 208 1 2763 174 71 51 chr17 62051826 62052488 -23385992 + L1MB7 LINE L1 5494 6168 -16 22 0 0 0 chr17 62052775 62052797 -23385683 + AT_rich Low_complexity Low_complexity 1 22 0 1929 123 0 20 chr17 62052906 62053207 -23385273 - AluSx SINE Alu -17 295 1 514 225 17 116 chr17 62053208 62053318 -23385162 + L2 LINE L2 3158 3247 -66 3211 112 40 29 chr17 62053318 62053845 -23384635 + L1MA3 LINE L1 5772 6304 -1 514 225 17 116 chr17 62053845 62053907 -23384573 + L2 LINE L2 3247 3313 0 1765 143 45 7 chr17 62054043 62054330 -23384150 + AluJb SINE Alu 1 298 -14 1380 220 97 37 chr17 62054601 62054983 -23383497 + L1ME3A LINE L1 5628 6032 -138 1753 141 4 11 chr17 62055263 62055533 -23382947 + AluJo SINE Alu 29 296 -16 3223 152 40 44 chr17 62055533 62055578 -23382902 + L1MB3 LINE L1 5567 5611 -572 664 226 0 8 chr17 62055578 62055711 -23382769 + FLAM_A SINE Alu 1 132 -1 3223 152 40 44 chr17 62055711 62056199 -23382281 + L1MB3 LINE L1 5611 6100 -83 2411 71 14 0 chr17 62056199 62056493 -23381987 - AluY SINE Alu -13 298 1 3223 152 40 44 chr17 62056493 62056577 -23381903 + L1MB3 LINE L1 6100 6183 0 229 254 28 28 chr17 62056856 62056927 -23381553 + MIR SINE MIR 191 261 -1 188 320 98 41 chr17 62057045 62057167 -23381313 + L3 LINE CR1 1049 1177 -400 1337 181 34 48 chr17 62057219 62057512 -23380968 + AluJo SINE Alu 1 289 -13 1442 93 25 80 chr17 62057584 62057821 -23380659 - AluSx SINE Alu -25 287 64 207 0 0 0 chr17 62058236 62058259 -23380221 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 853 182 12 59 chr17 62058265 62058435 -23380045 - AluJo SINE Alu -37 275 114 1983 133 16 7 chr17 62058758 62059066 -23379414 + AluSx SINE Alu 1 311 -1 432 92 0 31 chr17 62059195 62059260 -23379220 - AluSc SINE Alu -9 300 238 2202 116 7 0 chr17 62059558 62059859 -23378621 + AluSx SINE Alu 1 303 -9 799 175 0 16 chr17 62060003 62060129 -23378351 - FLAM_C SINE Alu -9 124 1 759 179 70 58 chr17 62060201 62060357 -23378123 - FAM SINE Alu -17 168 11 2065 118 97 3 chr17 62060457 62060787 -23377693 + MER7C DNA MER2_type 4 364 -238 1229 98 81 110 chr17 62060788 62060850 -23377630 - MER30 DNA MER1_type -1 229 167 865 157 0 8 chr17 62060850 62060984 -23377496 - FLAM_C SINE Alu 0 133 1 1229 98 81 110 chr17 62060984 62061157 -23377323 - MER30 DNA MER1_type -63 167 1 1663 136 0 0 chr17 62061157 62061393 -23377087 + MER7C DNA MER2_type 367 602 0 1377 203 21 7 chr17 62061601 62061882 -23376598 - AluJo SINE Alu -22 290 6 1192 168 9 37 chr17 62062558 62062772 -23375708 + AluJo SINE Alu 85 292 -20 861 145 0 0 chr17 62062815 62062932 -23375548 + FLAM_A SINE Alu 1 117 -16 25 31 0 0 chr17 62062932 62062964 -23375516 + AT_rich Low_complexity Low_complexity 1 32 0 235 313 143 7 chr17 62063129 62063276 -23375204 + MIR SINE MIR 75 241 -21 243 0 0 0 chr17 62063879 62063906 -23374574 + (A)n Simple_repeat Simple_repeat 1 27 0 222 62 0 0 chr17 62065208 62065240 -23373240 + (TCC)n Simple_repeat Simple_repeat 1 32 0 207 0 0 0 chr17 62065623 62065646 -23372834 + (GAGTG)n Simple_repeat Simple_repeat 4 26 0 379 172 20 91 chr17 62066572 62066603 -23371877 + MER53 DNA DNA 2 34 -155 2590 30 14 0 chr17 62066603 62066899 -23371581 + AluY SINE Alu 1 300 -11 379 172 20 91 chr17 62066899 62066966 -23371514 + MER53 DNA DNA 34 93 -96 353 218 13 0 chr17 62066900 62066978 -23371502 - MER53 DNA DNA -16 173 95 * 240 125 0 71 chr17 62067086 62067142 -23371338 + MER53 DNA DNA 79 130 -59 1316 145 61 0 chr17 62067142 62067356 -23371124 + AluJo SINE Alu 78 304 -8 360 138 17 0 chr17 62067357 62067415 -23371065 + MER53 DNA DNA 131 189 0 2232 128 36 25 chr17 62067563 62067921 -23370559 - THE1B LTR MaLR 0 364 3 12370 132 139 79 chr17 62068069 62069637 -23368843 + L1M1 LINE L1 845 2317 -5248 1840 184 20 0 chr17 62069637 62069942 -23368538 - AluJb SINE Alu -1 311 1 12370 132 139 79 chr17 62069942 62070900 -23367580 + L1M1 LINE L1 2317 3550 -4015 2290 100 10 0 chr17 62070900 62071199 -23367281 - AluSq SINE Alu -10 303 2 12370 132 139 79 chr17 62071199 62071414 -23367066 + L1M1 LINE L1 3550 3751 -3814 6454 91 8 9 chr17 62071415 62071811 -23366669 + L1MA1 LINE L1 5435 5830 -472 2360 95 0 0 chr17 62071811 62072107 -23366373 + AluSc SINE Alu 1 296 -13 6454 91 8 9 chr17 62072107 62072579 -23365901 + L1MA1 LINE L1 5830 6302 0 969 145 0 20 chr17 62072597 62072749 -23365731 + AluSg/x SINE Alu 137 285 -27 875 238 58 79 chr17 62073106 62073383 -23365097 + MER21B LTR ERV1 182 452 -411 279 103 0 0 chr17 62073383 62073422 -23365058 - LTR24B LTR ERV1 -7 569 531 632 185 118 0 chr17 62073422 62073541 -23364939 - AluJo SINE Alu -178 134 2 952 148 31 6 chr17 62073541 62073703 -23364777 - LTR24B LTR ERV1 -33 543 378 821 218 7 0 chr17 62073706 62073848 -23364632 - FRAM SINE Alu -34 142 1 2490 99 47 6 chr17 62073848 62074212 -23364268 - LTR24B LTR ERV1 -197 379 1 1973 142 23 54 chr17 62074212 62074235 -23364245 + MER21B LTR ERV1 449 471 -392 2221 106 0 20 chr17 62074235 62074537 -23363943 + AluSq SINE Alu 1 296 -17 1973 142 23 54 chr17 62074537 62074865 -23363615 + MER21B LTR ERV1 471 789 -74 1525 204 50 3 chr17 62074929 62075087 -23363393 + MLT1G LTR MaLR 253 402 -188 2880 177 46 4 chr17 62075087 62075562 -23362918 - LTR42 LTR ERVL 0 495 1 1525 204 50 3 chr17 62075562 62075726 -23362754 + MLT1G LTR MaLR 402 590 0 2170 142 0 0 chr17 62075835 62076137 -23362343 + AluSx SINE Alu 1 302 -10 2362 71 0 10 chr17 62076216 62076510 -23361970 + AluY SINE Alu 1 291 -20 1484 206 34 3 chr17 62076797 62077089 -23361391 - AluJb SINE Alu -11 301 1 1573 164 28 24 chr17 62077313 62077600 -23360880 + AluJb SINE Alu 2 289 -23 2319 88 3 10 chr17 62077610 62077905 -23360575 + AluSg SINE Alu 2 294 -16 1542 185 20 10 chr17 62077915 62078212 -23360268 + AluJb SINE Alu 2 301 -11 2127 123 10 0 chr17 62078214 62078514 -23359966 + AluSx SINE Alu 1 303 -9 272 104 4 0 chr17 62078596 62078642 -23359838 + AluJb SINE Alu 178 214 -88 1804 173 7 13 chr17 62079123 62079429 -23359051 + AluSx SINE Alu 1 304 -8 1428 183 0 4 chr17 62079520 62079761 -23358719 + AluJo SINE Alu 73 312 0 504 207 0 41 chr17 62080036 62080157 -23358323 + FLAM_A SINE Alu 22 137 -5 329 159 72 16 chr17 62080157 62080414 -23358066 + (TA)n Simple_repeat Simple_repeat 1 271 0 2300 139 39 46 chr17 62080517 62080565 -23357915 + MSTC LTR MaLR 1 48 -380 1717 199 13 3 chr17 62080565 62080866 -23357614 + AluJo SINE Alu 1 304 -8 2300 139 39 46 chr17 62080866 62081248 -23357232 + MSTC LTR MaLR 48 428 0 1278 188 30 56 chr17 62081348 62081689 -23356791 + Tigger7 DNA MER2_type 1 2490 -1 2235 116 3 0 chr17 62081726 62082027 -23356453 - AluSx SINE Alu -10 302 1 859 181 0 0 chr17 62082264 62082397 -23356083 + FAM SINE Alu 1 133 -52 3704 146 19 8 chr17 62082507 62083137 -23355343 - L1MB4 LINE L1 -83 6097 5461 2049 128 37 0 chr17 62083137 62083433 -23355047 + AluSx SINE Alu 1 307 -5 2184 110 0 10 chr17 62083444 62083743 -23354737 + AluSx SINE Alu 15 310 -2 35 0 0 0 chr17 62083743 62083778 -23354702 + AT_rich Low_complexity Low_complexity 1 35 0 745 191 6 49 chr17 62083820 62083982 -23354498 + FRAM SINE Alu 1 155 -11 1285 168 0 59 chr17 62084000 62084238 -23354242 + AluJb SINE Alu 59 282 -30 23 33 0 0 chr17 62084238 62084268 -23354212 + AT_rich Low_complexity Low_complexity 1 30 0 1074 147 0 6 chr17 62084488 62084651 -23353829 - AluJb SINE Alu -17 295 134 295 324 68 51 chr17 62085561 62085737 -23352743 - MLT1K LTR MaLR -399 189 11 2160 113 23 3 chr17 62085843 62086143 -23352337 - AluSp SINE Alu -7 306 1 851 81 137 87 chr17 62086147 62086308 -23352172 - FRAM SINE Alu -9 167 1 1068 193 21 41 chr17 62086326 62086569 -23351911 - L1ME2 LINE L1 -10 6154 5917 303 244 50 8 chr17 62086581 62086700 -23351780 - L1MEc LINE L1 -4256 2140 2017 2117 126 10 0 chr17 62086973 62087267 -23351213 - AluSx SINE Alu -15 297 1 863 162 0 0 chr17 62087304 62087446 -23351034 - AluSg/x SINE Alu 0 312 171 1665 115 51 0 chr17 62087446 62087681 -23350799 - AluSx SINE Alu -57 255 9 328 264 90 19 chr17 62087933 62088088 -23350392 + L1ME3A LINE L1 4385 4550 -1596 364 158 0 49 chr17 62088370 62088452 -23350028 - AluJ/FRAM SINE Alu -4 298 221 1639 154 0 21 chr17 62088453 62088732 -23349748 + AluSx SINE Alu 1 273 -39 1128 242 164 10 chr17 62088771 62089253 -23349227 + L1ME3A LINE L1 5333 5907 -263 1105 197 136 11 chr17 62089253 62089532 -23348948 - MER119 DNA MER1_type 0 583 270 727 157 9 0 chr17 62089644 62089759 -23348721 + FLAM_C SINE Alu 3 118 -25 41 17 0 17 chr17 62089759 62089779 -23348701 + AT_rich Low_complexity Low_complexity 1 20 -38 2158 131 0 0 chr17 62089779 62090070 -23348410 + AluSx SINE Alu 1 291 -21 41 17 0 17 chr17 62090070 62090108 -23348372 + AT_rich Low_complexity Low_complexity 20 58 0 1890 156 0 11 chr17 62090125 62090407 -23348073 + AluJo SINE Alu 13 291 -21 2350 93 7 3 chr17 62090428 62090728 -23347752 + AluSq SINE Alu 1 301 -12 408 214 39 10 chr17 62090787 62090890 -23347590 - MLT1L LTR MaLR 0 615 510 587 152 179 0 chr17 62091052 62091164 -23347316 + FLAM_A SINE Alu 1 132 -1 338 183 166 3 chr17 62091353 62091463 -23347017 - L1ME2 LINE L1 -394 5776 5649 773 283 91 96 chr17 62091927 62092478 -23346002 - MLT1K LTR MaLR 0 588 41 3316 142 32 2 chr17 62092480 62093014 -23345466 + L1PA16 LINE L1 5617 6166 0 664 244 53 57 chr17 62093328 62093631 -23344849 + AluJo SINE Alu 1 302 0 1830 121 8 0 chr17 62093830 62094087 -23344393 - AluSg SINE Alu -12 298 40 2230 125 3 0 chr17 62094834 62095139 -23343341 - AluSx SINE Alu -6 306 1 661 203 0 43 chr17 62095472 62095610 -23342870 - FLAM_C SINE Alu 0 133 2 2336 103 0 0 chr17 62095733 62096043 -23342437 + AluSg SINE Alu 1 310 0 566 193 129 57 chr17 62096094 62096358 -23342122 - L1M4 LINE L1 -1445 4701 4419 694 294 93 50 chr17 62096381 62096842 -23341638 - L2 LINE L2 -50 3263 2758 1767 157 17 14 chr17 62096842 62097135 -23341345 - AluSx SINE Alu -18 294 1 694 294 93 50 chr17 62097135 62097311 -23341169 - L2 LINE L2 -555 2758 2591 1071 146 0 6 chr17 62097311 62097475 -23341005 + AluSg/x SINE Alu 137 299 -13 888 163 46 0 chr17 62097526 62097679 -23340801 + FAM SINE Alu 2 161 -14 550 316 123 35 chr17 62097701 62098365 -23340115 - L2 LINE L2 -2523 791 69 238 260 71 47 chr17 62098433 62098560 -23339920 - L1M4 LINE L1 -2393 3753 3624 24 67 0 0 chr17 62098696 62098741 -23339739 + AT_rich Low_complexity Low_complexity 1 45 0 205 241 0 17 chr17 62100143 62100201 -23338279 + (CCG)n Simple_repeat Simple_repeat 2 58 0 608 113 0 176 chr17 62102041 62102200 -23336280 - FLAM_C SINE Alu -2 131 1 180 0 0 0 chr17 62102395 62102415 -23336065 + (A)n Simple_repeat Simple_repeat 1 20 0 4152 178 87 33 chr17 62102827 62103102 -23335378 - Charlie1a DNA MER1_type -1311 1450 1191 2165 98 28 3 chr17 62103102 62103388 -23335092 + AluSx SINE Alu 1 293 -19 4152 178 87 33 chr17 62103388 62104174 -23334306 - Charlie1a DNA MER1_type -1570 1191 332 903 207 17 0 chr17 62104174 62104353 -23334127 + AluJb SINE Alu 86 267 -45 1473 209 16 37 chr17 62104355 62104419 -23334061 - Charlie1a DNA MER1_type -2419 342 278 1926 133 47 17 chr17 62104419 62104720 -23333760 - AluSx SINE Alu -2 310 1 1473 209 16 37 chr17 62104720 62104976 -23333504 - Charlie1a DNA MER1_type -2483 278 29 3392 167 51 32 chr17 62105196 62105233 -23333247 - L1MB4 LINE L1 -6 6174 6139 2185 106 3 10 chr17 62105233 62105535 -23332945 + AluSx SINE Alu 1 300 -12 3392 167 51 32 chr17 62105535 62106180 -23332300 - L1MB4 LINE L1 -41 6139 5479 1383 166 3 105 chr17 62106411 62106743 -23331737 - AluJo SINE Alu -14 298 1 2145 80 3 63 chr17 62106883 62107212 -23331268 - AluSp SINE Alu 0 312 2 1016 125 132 0 chr17 62107992 62108144 -23330336 + AluY SINE Alu 1 172 -139 413 102 0 17 chr17 62108144 62108203 -23330277 + AluSc SINE Alu 222 279 -30 462 256 99 6 chr17 62108520 62108692 -23329788 + LTR16C LTR ERVL 298 485 -6 2135 132 10 0 chr17 62108773 62109069 -23329411 + AluSx SINE Alu 1 299 -13 610 313 41 38 chr17 62109116 62109407 -23329073 + L2 LINE L2 2839 3130 -183 1773 161 3 20 chr17 62109517 62109809 -23328671 + AluJo SINE Alu 1 287 -25 2727 103 99 14 chr17 62110236 62110738 -23327742 + LTR35 LTR ERV1 1 618 0 677 175 0 0 chr17 62110738 62110852 -23327628 + L1MD3 LINE L1 7714 7827 -168 2334 106 0 3 chr17 62110971 62111282 -23327198 + AluSq SINE Alu 3 312 -1 1123 201 75 53 chr17 62111500 62111818 -23326662 + MLT1D LTR MaLR 1 325 -180 2555 221 134 118 chr17 62111818 62112107 -23326373 - L1M4 LINE L1 -4842 1700 1417 1592 150 73 4 chr17 62112107 62112367 -23326113 - AluJo SINE Alu -29 283 6 2555 221 134 118 chr17 62112367 62112383 -23326097 - L1M4 LINE L1 -5125 1417 1403 1885 172 0 0 chr17 62112383 62112674 -23325806 - AluJo SINE Alu -21 291 1 2555 221 134 118 chr17 62112674 62112840 -23325640 - L1M4 LINE L1 -5139 1403 1241 2466 89 3 0 chr17 62112840 62113144 -23325336 - AluSp SINE Alu -8 305 1 2555 221 134 118 chr17 62113144 62113256 -23325224 - L1M4 LINE L1 -5301 1241 1132 2653 61 0 0 chr17 62113256 62113567 -23324913 - AluSq SINE Alu 0 313 3 2555 221 134 118 chr17 62113567 62114615 -23323865 - L1M4 LINE L1 -5410 1132 40 2316 105 0 10 chr17 62114670 62114983 -23323497 - AluSx SINE Alu -2 310 1 2612 58 0 6 chr17 62115001 62115313 -23323167 - AluY SINE Alu -1 310 1 2173 56 102 7 chr17 62115324 62115608 -23322872 - AluY SINE Alu 0 311 1 183 80 0 0 chr17 62115917 62115942 -23322538 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 291 196 0 0 chr17 62116026 62116082 -23322398 - FLAM SINE Alu -2 131 76 180 0 0 0 chr17 62116115 62116135 -23322345 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1863 118 0 4 chr17 62116149 62116403 -23322077 - AluSq SINE Alu -47 266 14 1968 150 0 0 chr17 62116787 62117073 -23321407 + AluSx SINE Alu 1 286 -26 1601 195 44 0 chr17 62117129 62117427 -23321053 + AluJb SINE Alu 1 311 -1 2078 108 4 4 chr17 62117996 62118275 -23320205 + AluSc SINE Alu 1 279 -30 810 278 64 0 chr17 62118340 62118574 -23319906 + MIR SINE MIR 13 261 -1 2292 106 0 0 chr17 62118649 62118942 -23319538 - AluSx SINE Alu -19 293 1 386 252 122 0 chr17 62119030 62119177 -23319303 - MIR SINE MIR -50 212 48 2309 110 0 7 chr17 62119180 62119490 -23318990 - AluSq SINE Alu -3 310 3 452 223 66 8 chr17 62119597 62119718 -23318762 + FLAM_A SINE Alu 5 132 -1 1075 210 62 58 chr17 62119870 62120146 -23318334 + AluJo SINE Alu 1 277 -35 203 257 88 53 chr17 62120254 62120367 -23318113 + L2 LINE L2 1356 1472 -1842 733 182 21 0 chr17 62120460 62120603 -23317877 + MER5A DNA MER1_type 44 189 0 432 306 58 17 chr17 62120620 62120793 -23317687 + MER5A DNA MER1_type 10 189 0 2292 98 0 13 chr17 62120882 62121189 -23317291 - AluSq SINE Alu -10 303 1 2000 144 0 3 chr17 62121249 62121547 -23316933 + AluJb SINE Alu 5 301 -11 553 333 71 18 chr17 62121556 62121937 -23316543 + L2 LINE L2 1698 2098 -1216 849 150 18 66 chr17 62122060 62122227 -23316253 - MER20 DNA MER1_type -54 165 7 2213 134 0 0 chr17 62122310 62122616 -23315864 - AluSx SINE Alu -6 306 1 316 253 13 0 chr17 62123332 62123411 -23315069 + L2 LINE L2 3221 3300 -13 1268 185 161 8 chr17 62123649 62123909 -23314571 - AluSg SINE Alu 0 300 1 2300 95 3 3 chr17 62123922 62124270 -23314210 - AluSp SINE Alu 0 313 1 1443 136 74 21 chr17 62124792 62125063 -23313417 - AluJo SINE Alu 0 313 30 1412 159 14 0 chr17 62125370 62125578 -23312902 - AluJb SINE Alu -101 211 1 1032 110 110 101 chr17 62125579 62125750 -23312730 + MLT1F1 LTR MaLR 339 515 -52 2012 161 0 0 chr17 62125750 62126057 -23312423 - AluSx SINE Alu 0 307 1 1032 110 110 101 chr17 62126057 62126111 -23312369 + MLT1F1 LTR MaLR 515 567 0 1856 173 0 0 chr17 62126360 62126655 -23311825 + AluJb SINE Alu 1 295 -17 586 198 0 9 chr17 62126984 62127090 -23311390 - FRAM SINE Alu -75 101 1 446 287 104 6 chr17 62127090 62127254 -23311226 + Charlie8 DNA MER1_type 97 276 -2141 2187 135 0 0 chr17 62127536 62127883 -23310597 - AluJb SINE Alu 0 347 1 2315 106 0 3 chr17 62128164 62128475 -23310005 - AluSg SINE Alu 0 310 1 2405 89 3 0 chr17 62128477 62128781 -23309699 - AluSc SINE Alu -4 305 1 364 212 0 12 chr17 62129393 62129478 -23309002 + L2 LINE L2 2451 2534 -780 718 112 19 9 chr17 62129484 62129591 -23308889 + AluJb SINE Alu 4 111 -201 1123 184 163 16 chr17 62129599 62129999 -23308481 - LTR18B LTR ERVL -63 551 1 546 144 0 0 chr17 62129999 62130089 -23308391 + FLAM_C SINE Alu 53 142 -1 671 245 68 12 chr17 62130107 62130356 -23308124 + HAL1 LINE L1 1686 1948 -559 3536 114 79 22 chr17 62130363 62130944 -23307536 - LTR18B LTR ERVL 0 614 1 1891 174 10 0 chr17 62131147 62131446 -23307034 - HERVL18 LTR ERVL -2556 3491 3190 1062 84 7 0 chr17 62131446 62131588 -23306892 + AluSg/x SINE Alu 170 312 0 375 105 38 4 chr17 62131599 62131710 -23306770 - HERVL18 LTR ERVL -3768 2279 2119 * 1128 186 20 7 chr17 62131709 62132064 -23306416 - HERVL18 LTR ERVL -4237 1810 1388 895 222 12 0 chr17 62132092 62132263 -23306217 - HERVL18 LTR ERVL -5381 666 494 * 1614 185 3 11 chr17 62132248 62132535 -23305945 - HERVL18 LTR ERVL -5744 303 19 3430 125 78 14 chr17 62132556 62133133 -23305347 - LTR18B LTR ERVL 0 614 1 436 228 103 0 chr17 62133140 62133285 -23305195 + HAL1 LINE L1 1943 2102 -405 2140 104 13 30 chr17 62133312 62133611 -23304869 + AluSq SINE Alu 1 294 -19 279 180 0 16 chr17 62133625 62133686 -23304794 + THE1B LTR MaLR 195 254 -110 31 0 0 0 chr17 62134180 62134211 -23304269 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 62134280 62134301 -23304179 + AT_rich Low_complexity Low_complexity 1 21 0 1286 108 84 117 chr17 62134953 62135286 -23303194 - MER33 DNA MER1_type -2 322 1 1072 154 0 6 chr17 62135294 62135469 -23303011 + MER5A DNA MER1_type 1 174 -15 607 184 0 0 chr17 62135648 62135746 -23302734 - LTR32 LTR ERVL 0 471 374 1002 142 0 0 chr17 62135753 62135894 -23302586 - AluJb SINE Alu -16 296 156 23 0 0 0 chr17 62135906 62135929 -23302551 + AT_rich Low_complexity Low_complexity 1 23 0 1824 126 14 35 chr17 62135958 62136053 -23302427 - LTR32 LTR ERVL -80 391 296 2354 101 0 3 chr17 62136053 62136351 -23302129 + AluSx SINE Alu 1 297 -15 1824 126 14 35 chr17 62136351 62136541 -23301939 - LTR32 LTR ERVL -175 296 112 2094 125 7 0 chr17 62136897 62137184 -23301296 - AluSx SINE Alu -23 289 1 521 154 16 106 chr17 62137540 62137579 -23300901 - LTR32 LTR ERVL -345 126 85 1724 111 118 26 chr17 62137579 62137712 -23300768 - AluSx SINE Alu -16 296 177 245 27 54 0 chr17 62137712 62137749 -23300731 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2237 97 0 0 chr17 62137749 62138028 -23300452 - AluSc SINE Alu -30 279 1 1724 111 118 26 chr17 62138028 62138164 -23300316 - AluSx SINE Alu -134 178 1 521 154 16 106 chr17 62138164 62138247 -23300233 - LTR32 LTR ERVL -386 85 15 2606 188 34 38 chr17 62138248 62138781 -23299699 + MLT1F LTR MaLR 10 540 -2 1971 151 0 0 chr17 62138988 62139272 -23299208 + AluSx SINE Alu 1 284 -28 872 144 0 8 chr17 62139448 62139580 -23298900 - FLAM_A SINE Alu -1 132 2 402 221 136 7 chr17 62139606 62139760 -23298720 - L1ME LINE L1 -326 5795 5622 421 121 0 0 chr17 62139763 62139821 -23298659 + AluS SINE Alu 2 59 -259 1568 187 11 14 chr17 62140214 62140492 -23297988 + AluJo SINE Alu 1 277 -35 2424 91 7 0 chr17 62140687 62140996 -23297484 + AluY SINE Alu 1 311 0 2164 99 0 3 chr17 62142240 62142524 -23295956 - AluSq SINE Alu 0 313 31 1399 130 7 104 chr17 62142624 62142690 -23295790 + AluJb SINE Alu 67 138 -174 2073 102 33 13 chr17 62142690 62142994 -23295486 + AluSg SINE Alu 1 310 0 1399 130 7 104 chr17 62142994 62143197 -23295283 + AluJb SINE Alu 138 310 -2 2094 97 0 94 chr17 62143205 62143544 -23294936 + AluSg SINE Alu 1 307 -3 1645 153 15 22 chr17 62143570 62143838 -23294642 + AluJo SINE Alu 1 266 -46 2238 76 24 0 chr17 62143895 62144183 -23294297 - AluY SINE Alu -16 295 1 2163 124 40 143 chr17 62144392 62145000 -23293480 - LTR12 LTR ERV1 -219 2219 53 252 231 0 0 chr17 62145000 62145052 -23293428 - LTR30 LTR ERV1 -670 52 1 493 208 9 9 chr17 62145061 62145167 -23293313 - MER87 LTR ERV1 0 541 436 1837 154 0 7 chr17 62145531 62145811 -23292669 - AluSx SINE Alu -15 297 20 1026 113 0 13 chr17 62146491 62146642 -23291838 - L1MB3 LINE L1 -233 5950 5802 1886 171 0 0 chr17 62146642 62146940 -23291540 + AluJb SINE Alu 1 298 -14 1748 135 4 0 chr17 62146993 62147238 -23291242 + AluSx SINE Alu 1 246 -66 2235 97 7 17 chr17 62147358 62147521 -23290959 - AluSx SINE Alu -15 297 137 2289 107 0 7 chr17 62147521 62147831 -23290649 - AluSc SINE Alu -1 308 1 2235 97 7 17 chr17 62147831 62147967 -23290513 - AluSx SINE Alu -175 137 1 288 226 236 0 chr17 62148034 62148140 -23290340 - L1ME4a LINE L1 0 6121 5991 21 36 0 0 chr17 62148237 62148265 -23290215 + GC_rich Low_complexity Low_complexity 1 28 0 2804 86 38 90 chr17 62148316 62148818 -23289662 + SVA Other Other 393 868 -518 1622 137 90 47 chr17 62148981 62149302 -23289178 - Tigger2 DNA MER2_type -2154 564 230 2068 125 0 44 chr17 62149348 62149668 -23288812 - AluSx SINE Alu -6 306 1 1432 112 37 29 chr17 62149668 62149909 -23288571 - Tigger2 DNA MER2_type -2474 244 2 2188 128 7 0 chr17 62150080 62150384 -23288096 - AluSx SINE Alu -6 306 1 511 339 82 24 chr17 62150388 62150840 -23287640 + L2 LINE L2 1758 2235 -1079 2473 74 0 0 chr17 62152241 62152540 -23285940 + AluSx SINE Alu 1 299 -13 339 286 79 32 chr17 62152603 62152729 -23285751 + MER94 DNA DNA 1 132 -2 1264 162 75 55 chr17 62152729 62152982 -23285498 - AluJo SINE Alu -46 266 9 4251 116 18 10 chr17 62153186 62153814 -23284666 + MER41B LTR ERV1 1 633 -2 1647 181 0 0 chr17 62153814 62154079 -23284401 + AluJo SINE Alu 10 274 -38 9785 127 17 29 chr17 62154179 62154791 -23283689 + Tigger2 DNA MER2_type 910 1528 -1190 2292 96 10 0 chr17 62154791 62155084 -23283396 + AluSx SINE Alu 1 296 -16 9785 127 17 29 chr17 62155084 62155469 -23283011 + Tigger2 DNA MER2_type 1528 1916 -802 2237 105 20 0 chr17 62155469 62155773 -23282707 + AluSx SINE Alu 1 310 -2 9785 127 17 29 chr17 62155773 62156300 -23282180 + Tigger2 DNA MER2_type 1916 2418 -300 2308 95 0 3 chr17 62156300 62156595 -23281885 - AluSq SINE Alu -18 295 2 9785 127 17 29 chr17 62156595 62156638 -23281842 + Tigger2 DNA MER2_type 2418 2460 -258 651 146 58 0 chr17 62156753 62156856 -23281624 + FRAM SINE Alu 54 162 -14 379 217 83 42 chr17 62156928 62157048 -23281432 - L1MB3 LINE L1 -2 6181 6057 1707 123 11 11 chr17 62157066 62157343 -23281137 - L1PA16 LINE L1 -2 6164 5888 3948 137 49 5 chr17 62157406 62158255 -23280225 - L1PA16 LINE L1 -282 5884 4994 262 275 33 22 chr17 62158405 62158496 -23279984 - LTR41 LTR ERVL -559 214 123 393 262 24 0 chr17 62158741 62158867 -23279613 + L1MC4 LINE L1 6949 7077 -965 189 0 0 0 chr17 62158887 62158908 -23279572 + (T)n Simple_repeat Simple_repeat 1 21 0 333 120 0 0 chr17 62158908 62158958 -23279522 - MER57B LTR ERV1 -25 409 360 1065 266 47 76 chr17 62159101 62159538 -23278942 + L1MC4 LINE L1 7114 7533 -509 2172 106 26 0 chr17 62159538 62159841 -23278639 - AluSx SINE Alu 0 312 2 1065 266 47 76 chr17 62159841 62159953 -23278527 + L1MC4 LINE L1 7533 7647 -395 806 117 0 42 chr17 62159969 62160089 -23278391 - FLAM_C SINE Alu -18 125 11 362 265 174 32 chr17 62160104 62160323 -23278157 + L1MC4 LINE L1 7651 7900 -142 * 790 279 63 9 chr17 62160318 62160633 -23277847 + L1M4 LINE L1 4187 4518 -1628 2416 91 0 0 chr17 62160735 62161032 -23277448 + AluSq SINE Alu 1 297 -16 435 211 0 0 chr17 62161114 62161209 -23277271 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 1275 104 0 153 chr17 62161312 62161509 -23276971 - AluSg/x SINE Alu -16 296 143 2321 73 3 3 chr17 62161509 62161798 -23276682 - AluSp SINE Alu -24 289 1 1275 104 0 153 chr17 62161798 62161849 -23276631 - AluSg/x SINE Alu -169 143 86 296 333 147 0 chr17 62161947 62162145 -23276335 - L2 LINE L2 -223 3049 2823 2215 123 3 0 chr17 62162288 62162590 -23275890 - AluSx SINE Alu -9 303 1 652 206 56 0 chr17 62162711 62162837 -23275643 - FLAM_A SINE Alu 0 133 1 332 26 0 0 chr17 62163274 62163312 -23275168 + (T)n Simple_repeat Simple_repeat 1 38 0 827 253 4 12 chr17 62163338 62163583 -23274897 + AluJb SINE Alu 21 263 -49 2322 82 7 0 chr17 62163937 62164228 -23274252 + AluY SINE Alu 1 293 -18 489 276 57 44 chr17 62164432 62164630 -23273850 - MIR SINE MIR -25 237 34 2397 55 62 3 chr17 62164630 62164920 -23273560 - AluSp SINE Alu -6 307 1 489 276 57 44 chr17 62164920 62164949 -23273531 - MIR SINE MIR -228 34 7 180 298 0 18 chr17 62165080 62165137 -23273343 + L2 LINE L2 3014 3069 -203 2014 126 0 14 chr17 62166215 62166537 -23271943 - AluJb SINE Alu 0 312 19 1579 102 0 10 chr17 62166650 62166856 -23271624 - AluSq SINE Alu -109 204 1 800 172 7 28 chr17 62167121 62167266 -23271214 - FLAM_C SINE Alu 0 143 2 2471 68 7 16 chr17 62167424 62167732 -23270748 - AluY SINE Alu -6 305 1 2308 98 20 0 chr17 62168026 62168193 -23270287 - AluSx SINE Alu -9 303 126 188 35 35 0 chr17 62168193 62168222 -23270258 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2308 98 20 0 chr17 62168222 62168351 -23270129 - AluSx SINE Alu -186 126 1 195 129 0 0 chr17 62168388 62168419 -23270061 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 186 43 0 0 chr17 62168417 62168440 -23270040 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 * 1838 158 0 11 chr17 62168440 62168725 -23269755 - AluJb SINE Alu -30 282 1 2071 152 20 0 chr17 62169015 62169317 -23269163 - 7SLRNA srpRNA srpRNA -12 308 1 302 295 53 0 chr17 62169406 62169501 -23268979 + MLT1K LTR MaLR 141 240 -348 1759 183 7 0 chr17 62169734 62170023 -23268457 + AluJo SINE Alu 3 293 -19 1789 124 115 35 chr17 62170034 62170218 -23268262 + L1MB3 LINE L1 5566 5734 -449 2211 96 24 3 chr17 62170218 62170510 -23267970 + AluSc SINE Alu 1 298 -11 1789 124 115 35 chr17 62170510 62170664 -23267816 + L1MB3 LINE L1 5734 5931 -252 186 289 0 0 chr17 62170778 62170823 -23267657 + MIR SINE MIR 48 92 -170 1859 154 0 53 chr17 62170936 62171144 -23267336 - AluJb SINE Alu -11 301 114 2367 98 0 10 chr17 62171144 62171451 -23267029 - AluSx SINE Alu -8 304 1 1859 154 0 53 chr17 62171451 62171560 -23266920 - AluJb SINE Alu -198 114 1 1801 181 3 0 chr17 62172230 62172529 -23265951 + AluJo SINE Alu 1 300 -12 2498 77 0 0 chr17 62172601 62172900 -23265580 + AluY SINE Alu 1 299 -12 813 173 0 0 chr17 62173215 62173342 -23265138 + FLAM_C SINE Alu 1 127 -16 362 270 44 0 chr17 62173523 62173644 -23264836 + L1ME LINE L1 5543 5672 -449 2277 100 7 0 chr17 62173644 62173934 -23264546 + AluSx SINE Alu 2 293 -19 750 195 0 0 chr17 62174373 62174491 -23263989 + FLAM_C SINE Alu 1 118 -15 1999 127 7 3 chr17 62174504 62174788 -23263692 + AluSg SINE Alu 1 285 -25 1865 164 3 3 chr17 62175085 62175378 -23263102 - AluJo SINE Alu -19 293 1 3316 142 32 2 chr17 62175692 62176226 -23262254 - L1PA16 LINE L1 0 6166 5617 773 283 91 96 chr17 62176228 62176779 -23261701 + MLT1K LTR MaLR 41 588 0 345 183 166 3 chr17 62177243 62177353 -23261127 + L1ME LINE L1 5649 5776 -394 634 152 179 0 chr17 62177542 62177654 -23260826 - FLAM_A SINE Alu -1 132 1 413 229 39 11 chr17 62177800 62177919 -23260561 + MLT1L LTR MaLR 467 615 0 2321 94 7 3 chr17 62177978 62178277 -23260203 - AluSq SINE Alu -13 300 1 1880 156 0 11 chr17 62178298 62178580 -23259900 - AluJo SINE Alu -21 291 13 41 17 0 17 chr17 62178597 62178635 -23259845 + AT_rich Low_complexity Low_complexity 1 39 -19 2143 131 0 0 chr17 62178635 62178926 -23259554 - AluSx SINE Alu -21 291 1 41 17 0 17 chr17 62178926 62178946 -23259534 + AT_rich Low_complexity Low_complexity 39 58 0 426 138 0 0 chr17 62178946 62179004 -23259476 - FLAM SINE Alu -25 118 61 1432 168 17 4 chr17 62179235 62179467 -23259013 + AluJo SINE Alu 12 246 -66 356 281 115 22 chr17 62180248 62180387 -23258093 - HsTC2 DNA Tc2 -351 1547 1220 1685 284 83 12 chr17 62180394 62181197 -23257283 - L1M4 LINE L1 -1420 4726 3867 549 125 2 108 chr17 62181707 62181750 -23256730 - L1MB7 LINE L1 0 6183 6137 2407 61 14 0 chr17 62181750 62182043 -23256437 - AluY SINE Alu -14 297 1 549 125 2 108 chr17 62182043 62182122 -23256358 - L1MB7 LINE L1 -46 6137 6069 1975 120 20 17 chr17 62182122 62182422 -23256058 - AluSx SINE Alu -11 301 1 549 125 2 108 chr17 62182422 62182440 -23256040 - L1MB7 LINE L1 -114 6069 6051 732 170 37 52 chr17 62182445 62182580 -23255900 - FLAM_A SINE Alu 0 133 1 2197 106 3 3 chr17 62182772 62183064 -23255416 + AluSq SINE Alu 3 294 -19 22 35 0 0 chr17 62183156 62183185 -23255295 + AT_rich Low_complexity Low_complexity 1 29 0 2262 90 3 0 chr17 62183632 62183945 -23254535 + AluSx SINE Alu 1 312 0 233 313 10 20 chr17 62184071 62184170 -23254310 - L2 LINE L2 -939 2375 2278 1031 144 19 6 chr17 62184177 62184337 -23254143 + FAM SINE Alu 10 171 -14 411 202 90 0 chr17 62184667 62184756 -23253724 + MER104 DNA Tc2 6 102 -78 2312 100 0 0 chr17 62184758 62185059 -23253421 - AluSc SINE Alu -8 301 1 6808 147 43 54 chr17 62185491 62187635 -23250845 - L1MA4 LINE L1 -278 6022 3895 967 96 0 0 chr17 62187639 62187764 -23250716 - AluSg/x SINE Alu -17 293 169 1780 120 0 0 chr17 62187864 62188098 -23250382 - AluSp SINE Alu -79 234 1 1701 201 48 48 chr17 62188098 62188510 -23249970 - MER87 LTR ERV1 -129 412 1 2109 135 0 6 chr17 62188579 62188891 -23249589 - AluSx SINE Alu -2 310 1 1629 127 41 63 chr17 62188901 62188929 -23249551 - AluSx SINE Alu -4 308 281 453 115 0 0 chr17 62188929 62189016 -23249464 + (TATG)n Simple_repeat Simple_repeat 2 88 0 1629 127 41 63 chr17 62189016 62189302 -23249178 - AluSx SINE Alu -31 281 1 2049 113 0 3 chr17 62191237 62191521 -23246959 + AluSx SINE Alu 5 287 -25 185 65 32 0 chr17 62191703 62191734 -23246746 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 422 224 89 70 chr17 62192057 62192148 -23246332 - MER112 DNA MER1_type -2 258 170 2410 79 13 0 chr17 62192148 62192452 -23246028 + AluY SINE Alu 1 308 -3 422 224 89 70 chr17 62192452 62192574 -23245906 - MER112 DNA MER1_type -90 170 41 1461 102 19 10 chr17 62192574 62192780 -23245700 - L1PA13 LINE L1 -13 6150 5943 1383 111 9 53 chr17 62192931 62193157 -23245323 - AluSg/x SINE Alu -17 295 80 795 132 0 16 chr17 62193257 62193378 -23245102 + AluSg/x SINE Alu 191 309 0 2157 108 10 7 chr17 62193385 62193682 -23244798 + AluSx SINE Alu 1 298 -14 1492 181 19 58 chr17 62193992 62194317 -23244163 - AluJo SINE Alu 0 312 1 1113 163 17 6 chr17 62194455 62194627 -23243853 + FAM SINE Alu 1 174 -1 375 247 114 70 chr17 62194816 62195043 -23243437 - L1ME3A LINE L1 0 6170 5934 689 174 35 17 chr17 62195213 62195328 -23243152 - FLAM_A SINE Alu -19 123 7 916 263 70 23 chr17 62195335 62195839 -23242641 - L1ME3A LINE L1 -475 5687 5154 4371 165 31 16 chr17 62195849 62196660 -23241820 - L1MA9 LINE L1 -51 6261 5439 1256 181 32 16 chr17 62196662 62196911 -23241569 - AluJo SINE Alu -11 301 49 1933 147 32 83 chr17 62196911 62197026 -23241454 - L1MA9 LINE L1 -743 5403 5284 2015 118 0 0 chr17 62197026 62197356 -23241124 - AluSg SINE Alu 0 330 1 1933 147 32 83 chr17 62197356 62197554 -23240926 - L1MA9 LINE L1 -862 5284 5077 1664 143 63 21 chr17 62197554 62197867 -23240613 - AluSg SINE Alu 0 310 1 1933 147 32 83 chr17 62197867 62197970 -23240510 - L1MA9 LINE L1 -1069 5077 5046 2309 122 0 0 chr17 62197970 62198282 -23240198 - AluSx SINE Alu 0 312 1 1933 147 32 83 chr17 62198282 62198437 -23240043 - L1MA9 LINE L1 -1100 5046 4885 946 144 41 0 chr17 62198441 62198614 -23239866 - AluJb SINE Alu 0 313 135 2221 75 11 0 chr17 62198614 62198893 -23239587 - AluYb8 SINE Alu 0 318 37 1006 185 19 0 chr17 62199038 62199200 -23239280 + FAM SINE Alu 1 165 -10 911 118 0 37 chr17 62199214 62199349 -23239131 + FLAM_C SINE Alu 4 133 0 229 256 70 23 chr17 62199378 62199464 -23239016 - L1ME3A LINE L1 -1487 4659 4570 22 0 0 0 chr17 62199515 62199537 -23238943 + AT_rich Low_complexity Low_complexity 1 22 0 1738 166 0 42 chr17 62199600 62199913 -23238567 - AluJb SINE Alu -12 300 1 186 324 99 27 chr17 62199978 62200089 -23238391 - MIR SINE MIR -57 151 33 6181 106 204 98 chr17 62200089 62201586 -23236894 - pTR5 LTR ERV1 -39 2399 744 336 273 0 0 chr17 62201586 62201652 -23236828 - MIR SINE MIR -184 78 13 928 251 68 41 chr17 62201972 62202310 -23236170 + HERVL LTR ERVL 2180 2526 -3128 433 254 50 39 chr17 62202383 62202564 -23235916 - L1MC4 LINE L1 -110 7932 7750 1090 115 36 12 chr17 62202570 62202735 -23235745 + Tigger3(Golem) DNA MER2_type 2860 3028 -1 242 302 21 10 chr17 62202735 62202831 -23235649 + L1ME1 LINE L1 5919 6015 -151 709 181 56 0 chr17 62202832 62202976 -23235504 + L1MA10 LINE L1 6176 6327 -7 1085 266 100 55 chr17 62203167 62203309 -23235171 + L1ME3A LINE L1 5128 5262 -908 1864 151 37 10 chr17 62203309 62203607 -23234873 + AluSx SINE Alu 1 306 -6 1085 266 100 55 chr17 62203607 62203707 -23234773 + L1ME3A LINE L1 5262 5356 -814 1986 119 3 30 chr17 62203707 62204002 -23234478 + AluSx SINE Alu 1 287 -25 1085 266 100 55 chr17 62204002 62204252 -23234228 + L1ME3A LINE L1 5356 5593 -577 1017 240 23 18 chr17 62204252 62204469 -23234011 - MER58A DNA MER1_type -3 221 4 1085 266 100 55 chr17 62204469 62204715 -23233765 + L1ME3A LINE L1 5593 5902 -268 2698 148 31 85 chr17 62204716 62204833 -23233647 - MER44D DNA MER2_type -1883 604 482 2206 98 10 3 chr17 62204833 62205128 -23233352 - AluSc SINE Alu -12 297 1 2698 148 31 85 chr17 62205128 62205585 -23232895 - MER44D DNA MER2_type -2005 482 6 1898 70 0 4 chr17 62205635 62205865 -23232615 + AluSg SINE Alu 1 229 -81 2307 103 3 0 chr17 62206297 62206598 -23231882 + AluSp SINE Alu 1 302 -11 1969 121 11 4 chr17 62206612 62206953 -23231527 + AluSc SINE Alu 1 343 0 1009 65 73 0 chr17 62207860 62207984 -23230496 + AluSg SINE Alu 1 133 -177 2296 118 0 0 chr17 62207984 62208290 -23230190 + AluSq SINE Alu 1 306 -7 1822 107 4 4 chr17 62208453 62208705 -23229775 + AluSx SINE Alu 45 296 -16 2411 89 0 16 chr17 62208862 62209176 -23229304 + AluSp SINE Alu 1 309 -4 2167 116 0 19 chr17 62209909 62210227 -23228253 - AluSx SINE Alu 0 312 1 797 97 19 0 chr17 62210265 62210368 -23228112 - U6 snRNA snRNA -2 105 1 1435 136 68 0 chr17 62212452 62212673 -23225807 - MER46A DNA MER2_type 0 236 1 1170 128 0 22 chr17 62212723 62212903 -23225577 - AluSg/x SINE Alu -3 307 132 2210 108 3 0 chr17 62212903 62213199 -23225281 - AluSg SINE Alu -13 297 1 1564 113 0 0 chr17 62213235 62213438 -23225042 - AluSc SINE Alu -106 203 1 1651 236 144 13 chr17 62213543 62214014 -23224466 - MLT1F LTR MaLR -9 533 1 1515 172 19 19 chr17 62214222 62214489 -23223991 - AluJo SINE Alu -16 296 30 253 258 65 11 chr17 62214526 62214619 -23223861 - L1MDa LINE L1 -4182 2358 2261 1114 155 0 0 chr17 62214619 62214793 -23223687 + AluJb SINE Alu 135 308 -4 1110 190 0 0 chr17 62214829 62215003 -23223477 + FAM SINE Alu 1 174 -1 2326 116 0 0 chr17 62215019 62215330 -23223150 + AluSx SINE Alu 1 311 -1 1807 155 14 0 chr17 62215369 62215698 -23222782 + AluSx SINE Alu 1 333 0 498 215 133 66 chr17 62215703 62215923 -23222557 + L1MDa LINE L1 1578 1819 -4721 1868 122 104 0 chr17 62215923 62216202 -23222278 + AluSx SINE Alu 1 308 -4 498 215 133 66 chr17 62216202 62216237 -23222243 + L1MDa LINE L1 1819 1850 -4690 459 301 0 96 chr17 62216649 62216868 -23221612 + MIR SINE MIR 63 260 -2 1838 125 86 0 chr17 62216908 62217187 -23221293 + AluSx SINE Alu 1 303 -9 2332 94 3 0 chr17 62218598 62218896 -23219584 + AluSp SINE Alu 1 299 -14 2218 105 3 16 chr17 62218951 62219264 -23219216 + AluSx SINE Alu 1 309 -3 364 324 17 28 chr17 62219528 62219707 -23218773 + L1ME4a LINE L1 5651 5827 -294 862 219 72 93 chr17 62220142 62220474 -23218006 - L1MC/D LINE L1 -2017 5791 5454 2518 64 0 13 chr17 62220474 62220786 -23217694 - AluY SINE Alu -2 309 2 862 219 72 93 chr17 62220786 62220819 -23217661 - L1MC/D LINE L1 -2354 5454 5422 841 147 9 0 chr17 62220819 62220935 -23217545 - FLAM_C SINE Alu -15 118 2 862 219 72 93 chr17 62220935 62221052 -23217428 - L1MC/D LINE L1 -2386 5422 5318 698 188 125 28 chr17 62221362 62221506 -23216974 - AluJb SINE Alu -21 291 134 2350 101 0 0 chr17 62221506 62221813 -23216667 - AluSg SINE Alu -3 307 1 525 188 188 0 chr17 62221813 62221951 -23216529 - Charlie1 DNA MER1_type -411 2350 2187 1662 103 146 4 chr17 62221980 62222241 -23216239 - AluSp SINE Alu -15 298 1 2230 175 38 17 chr17 62222290 62222707 -23215773 - L1MC1 LINE L1 -10 6323 5898 502 186 10 0 chr17 62222707 62222809 -23215671 - Charlie1 DNA MER1_type -602 2159 2057 463 213 206 35 chr17 62222817 62222958 -23215522 - Charlie1 DNA MER1_type -2595 166 2 21 0 0 0 chr17 62223775 62223796 -23214684 + AT_rich Low_complexity Low_complexity 1 21 0 2072 121 3 7 chr17 62223849 62224155 -23214325 + AluSq SINE Alu 1 305 -8 651 183 70 9 chr17 62224158 62224273 -23214207 + FLAM_C SINE Alu 2 123 -10 32 0 0 0 chr17 62224273 62224305 -23214175 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr17 62224405 62224440 -23214040 + AT_rich Low_complexity Low_complexity 1 35 0 1487 175 88 0 chr17 62225154 62225417 -23213063 + AluJb SINE Alu 1 286 -26 1626 124 127 8 chr17 62225450 62225709 -23212771 + AluSg1 SINE Alu 1 290 -19 310 203 127 0 chr17 62225807 62225886 -23212594 - MER3 DNA MER1_type 0 209 121 2434 51 0 51 chr17 62225990 62226304 -23212176 + AluY SINE Alu 1 298 -13 966 156 24 18 chr17 62226502 62226669 -23211811 + AluJb SINE Alu 128 295 -17 833 117 70 0 chr17 62226671 62226799 -23211681 + AluJo SINE Alu 1 137 -175 1948 110 69 3 chr17 62226800 62227091 -23211389 + AluSq SINE Alu 4 313 0 2089 130 3 13 chr17 62227093 62227401 -23211079 + AluSx SINE Alu 1 305 -7 181 0 0 0 chr17 62227498 62227518 -23210962 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 670 116 0 21 chr17 62227518 62227613 -23210867 - AluSg/x SINE Alu -1 298 187 1826 143 43 4 chr17 62228222 62228501 -23209979 + AluSx SINE Alu 1 290 -22 1698 178 31 0 chr17 62228872 62229164 -23209316 - AluJb SINE Alu -10 302 2 375 225 112 81 chr17 62229192 62229315 -23209165 - L1M1 LINE L1 -370 5751 5668 2267 99 3 0 chr17 62229315 62229607 -23208873 - AluSp SINE Alu -19 294 2 375 225 112 81 chr17 62229607 62229678 -23208802 - L1M1 LINE L1 -453 5668 5601 252 236 0 42 chr17 62229846 62229918 -23208562 - L1MC/D LINE L1 -750 5609 5541 1410 209 106 9 chr17 62229918 62230249 -23208231 - MLT1F LTR MaLR 0 542 180 338 154 46 15 chr17 62230236 62230301 -23208179 + MLT1F LTR MaLR 148 214 -328 * 1103 261 74 33 chr17 62230410 62230774 -23207706 - L2 LINE L2 -5 3308 2930 1293 159 102 12 chr17 62230787 62231032 -23207448 - AluJo SINE Alu -12 300 34 1373 116 5 0 chr17 62231061 62231250 -23207230 - AluSq SINE Alu -12 301 112 237 159 0 0 chr17 62231318 62231362 -23207118 + T-rich Low_complexity Low_complexity 1 44 0 813 126 0 0 chr17 62231388 62231499 -23206981 - AluSq SINE Alu -202 111 1 1332 239 51 116 chr17 62231510 62232233 -23206247 - L2 LINE L2 -865 2449 1774 2267 114 0 0 chr17 62232465 62232762 -23205718 - AluSx SINE Alu -15 297 1 212 244 0 0 chr17 62233128 62233169 -23205311 - L2 LINE L2 -88 3225 3185 1843 153 17 3 chr17 62233217 62233505 -23204975 - AluSq SINE Alu -21 292 1 2354 104 0 0 chr17 62233523 62233831 -23204649 - AluSx SINE Alu -4 308 1 361 355 126 22 chr17 62233858 62234089 -23204391 - L2 LINE L2 -181 3091 2837 445 206 0 0 chr17 62234131 62234199 -23204281 + AluJ/FLAM SINE Alu 2 69 -243 238 253 0 13 chr17 62284275 62284354 -23154126 + L1M4 LINE L1 4272 4349 -1797 21 36 0 0 chr17 62284358 62284386 -23154094 + AT_rich Low_complexity Low_complexity 1 28 0 2081 138 10 0 chr17 62284490 62284795 -23153685 + AluSx SINE Alu 1 308 -4 363 290 68 6 chr17 62284983 62285145 -23153335 + L1M4 LINE L1 3137 3308 -2838 2404 237 91 40 chr17 62285278 62285467 -23153013 + L1M4 LINE L1 3566 3744 -2402 2062 101 34 24 chr17 62285467 62285763 -23152717 + AluSp SINE Alu 1 299 -14 2404 237 91 40 chr17 62285763 62286615 -23151865 + L1M4 LINE L1 3744 4660 -1486 4453 161 12 11 chr17 62286636 62287387 -23151093 + Tigger1 DNA MER2_type 4 755 -1663 361 326 56 9 chr17 62287547 62287762 -23150718 + MER41B LTR ERV1 181 405 -230 953 128 18 18 chr17 62287977 62288141 -23150339 + Tigger1 DNA MER2_type 2150 2313 -105 1199 189 47 4 chr17 62289889 62290143 -23148337 - MER58D DNA MER1_type -2 384 120 856 153 0 8 chr17 62290301 62290425 -23148055 + FRAM SINE Alu 18 140 -36 29 0 0 0 chr17 62290433 62290462 -23148018 + AT_rich Low_complexity Low_complexity 1 29 0 216 246 14 14 chr17 62290679 62290748 -23147732 + (TA)n Simple_repeat Simple_repeat 1 69 0 745 202 69 21 chr17 62290903 62291091 -23147389 + MIR SINE MIR 66 262 0 2195 113 0 10 chr17 62291173 62291473 -23147007 + AluSx SINE Alu 1 297 -15 1474 179 4 12 chr17 62291620 62291877 -23146603 + AluJo SINE Alu 1 255 -57 207 0 0 0 chr17 62291897 62291920 -23146560 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1812 176 0 10 chr17 62291920 62292226 -23146254 + AluJb SINE Alu 1 303 -9 1127 170 39 26 chr17 62292227 62292536 -23145944 + L1MB7 LINE L1 5182 5574 -600 16254 27 1 0 chr17 62292548 62295264 -23143216 + L1PA3 LINE L1 3441 6165 0 1383 212 17 30 chr17 62295279 62295576 -23142904 + AluJo SINE Alu 2 294 -18 5441 75 17 3 chr17 62295595 62296314 -23142166 + SVA Other Other 655 1383 -3 2647 165 22 45 chr17 62296333 62296440 -23142040 + L1MB7 LINE L1 5591 5699 -485 2260 75 17 3 chr17 62296440 62296735 -23141745 + AluY SINE Alu 9 307 -4 2647 165 22 45 chr17 62296735 62297227 -23141253 + L1MB7 LINE L1 5699 6176 -8 2857 16 0 0 chr17 62297455 62297773 -23140707 + AluYb8 SINE Alu 1 318 0 352 262 30 95 chr17 62298602 62298770 -23139710 - MER5A DNA MER1_type 0 189 33 2032 115 4 0 chr17 62298864 62299143 -23139337 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr17 62299143 62299169 -23139311 + (TA)n Simple_repeat Simple_repeat 2 27 0 307 292 9 28 chr17 62299189 62299304 -23139176 + L1ME1 LINE L1 5973 6106 -89 1819 147 16 26 chr17 62300004 62300311 -23138169 + AluJo SINE Alu 1 304 -8 318 242 134 40 chr17 62300497 62300646 -23137834 + HERVL40 LTR ERVL 1455 1617 -3913 1382 268 100 25 chr17 62300797 62301268 -23137212 + HERVL40 LTR ERVL 2662 3167 -2363 598 266 50 0 chr17 62301314 62301453 -23137027 + MER58B DNA MER1_type 195 340 -1 907 268 19 30 chr17 62301474 62301739 -23136741 + HERVL40 LTR ERVL 3205 3466 -2064 415 265 155 0 chr17 62301822 62302041 -23136439 - L1ME LINE L1 -3451 2629 2377 334 264 132 14 chr17 62302108 62302481 -23135999 - L1ME LINE L1 -3685 2395 1985 1095 257 96 18 chr17 62302786 62303481 -23134999 - L1ME LINE L1 -4607 1473 740 6170 207 38 17 chr17 62303499 62304221 -23134259 + L1M3f LINE L1 1 706 -5372 1299 198 6 69 chr17 62304221 62304539 -23133941 + AluJo SINE Alu 1 298 -14 6170 207 38 17 chr17 62304539 62304777 -23133703 + L1M3f LINE L1 706 937 -5141 261 0 0 0 chr17 62304777 62304806 -23133674 + (CAA)n Simple_repeat Simple_repeat 2 30 0 6170 207 38 17 chr17 62304806 62305810 -23132670 + L1M3f LINE L1 937 2013 -4065 1574 165 81 8 chr17 62305811 62306071 -23132409 + AluSx SINE Alu 2 280 -32 27 0 0 0 chr17 62306700 62306727 -23131753 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr17 62306824 62306846 -23131634 + AT_rich Low_complexity Low_complexity 1 22 0 212 289 0 0 chr17 62307399 62307444 -23131036 + MIR SINE MIR 69 113 -149 1831 111 27 11 chr17 62307466 62307728 -23130752 + AluSx SINE Alu 44 309 -3 2146 114 10 0 chr17 62308251 62308576 -23129904 + AluSx SINE Alu 1 328 0 21 0 0 0 chr17 62308773 62308794 -23129686 + AT_rich Low_complexity Low_complexity 1 21 0 2147 119 0 0 chr17 62308885 62309178 -23129302 - AluSx SINE Alu -19 293 1 2385 88 0 0 chr17 62309288 62309584 -23128896 + AluSc SINE Alu 1 296 -13 4218 106 39 51 chr17 62309658 62310189 -23128291 + Tigger3b DNA MER2_type 2 523 -2505 2160 113 3 0 chr17 62310189 62310481 -23127999 - AluSx SINE Alu -15 297 5 4218 106 39 51 chr17 62310481 62310694 -23127786 + Tigger3b DNA MER2_type 523 737 -494 838 164 0 0 chr17 62310694 62310822 -23127658 + FLAM_A SINE Alu 1 128 -14 2804 136 56 19 chr17 62310822 62311308 -23127172 + Tigger3b DNA MER2_type 729 1232 0 935 109 0 0 chr17 62311465 62311593 -23126887 - AluJb SINE Alu -11 301 174 2020 110 0 0 chr17 62311593 62311857 -23126623 + AluSx SINE Alu 12 275 -37 195 42 0 0 chr17 62311863 62311887 -23126593 + (TAA)n Simple_repeat Simple_repeat 2 25 0 27 29 0 0 chr17 62311887 62311921 -23126559 + AT_rich Low_complexity Low_complexity 1 34 0 30 0 0 0 chr17 62312729 62312759 -23125721 + AT_rich Low_complexity Low_complexity 1 30 0 1224 205 107 3 chr17 62312951 62313268 -23125212 - L1ME1 LINE L1 -4 6162 5813 3189 232 97 106 chr17 62313271 62315402 -23123078 - L1MEc LINE L1 -4083 2313 202 1971 148 39 0 chr17 62315430 62315761 -23122719 + MER2 DNA MER2_type 1 344 0 3903 115 9 28 chr17 62315812 62316107 -23122373 + L1MA5A LINE L1 5658 5957 -340 2379 81 0 3 chr17 62316107 62316404 -23122076 + AluY SINE Alu 1 296 -15 3903 115 9 28 chr17 62316404 62316486 -23121994 + L1MA5A LINE L1 5957 6039 -258 1641 191 0 22 chr17 62316486 62316800 -23121680 - AluJo SINE Alu -5 307 1 3903 115 9 28 chr17 62316800 62317073 -23121407 + L1MA5A LINE L1 6039 6297 0 1629 169 72 26 chr17 62317133 62317440 -23121040 + Tigger7 DNA MER2_type 1 321 -412 2156 118 7 0 chr17 62317510 62317806 -23120674 - AluSx SINE Alu -14 298 1 2461 73 0 3 chr17 62317932 62318233 -23120247 - AluSc SINE Alu -9 300 1 2010 96 3 93 chr17 62318361 62318693 -23119787 - AluSx SINE Alu 0 302 1 1987 134 3 7 chr17 62318701 62319006 -23119474 - AluY SINE Alu -7 304 1 23 33 0 0 chr17 62319688 62319718 -23118762 + AT_rich Low_complexity Low_complexity 1 30 0 295 287 69 0 chr17 62320495 62320596 -23117884 + Charlie8 DNA MER1_type 6 113 -2304 253 282 70 0 chr17 62320595 62320666 -23117814 + Charlie8 DNA MER1_type 1350 1425 -992 * 216 0 0 0 chr17 62321787 62321811 -23116669 + (TG)n Simple_repeat Simple_repeat 2 25 0 1546 171 26 39 chr17 62322285 62322590 -23115890 - AluJo SINE Alu -11 301 1 277 268 163 65 chr17 62322738 62322891 -23115589 + MIR3 SINE MIR 3 170 -38 1776 152 15 0 chr17 62324149 62324413 -23114067 + AluJo SINE Alu 1 268 -44 219 103 0 0 chr17 62324415 62324454 -23114026 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2092 129 3 0 chr17 62324498 62324793 -23113687 - AluSx SINE Alu -16 296 1 251 307 13 27 chr17 62325131 62325281 -23113199 + HAL1 LINE L1 163 310 -2197 * 821 271 124 60 chr17 62325265 62325682 -23112798 + HAL1 LINE L1 1688 2166 -341 2112 87 11 7 chr17 62325682 62325991 -23112489 + AluSp SINE Alu 20 313 0 821 271 124 60 chr17 62325991 62326241 -23112239 + HAL1 LINE L1 2166 2398 -109 1122 140 8 94 chr17 62326432 62326667 -23111813 + MER20 DNA MER1_type 1 215 -4 684 352 69 32 chr17 62328083 62328564 -23109916 + L2 LINE L2 2748 3233 -39 1898 117 46 29 chr17 62328638 62328945 -23109535 - AluSx SINE Alu 0 312 1 186 342 154 0 chr17 62329211 62329328 -23109152 + L2 LINE L2 3138 3272 0 2105 125 0 7 chr17 62329361 62329658 -23108822 - AluSx SINE Alu -17 295 1 637 127 76 34 chr17 62329906 62330024 -23108456 + FLAM_A SINE Alu 1 123 -10 25 31 0 0 chr17 62330275 62330307 -23108173 + AT_rich Low_complexity Low_complexity 1 32 0 876 213 142 140 chr17 62331806 62332171 -23106309 + MLT1E LTR MaLR 1 369 -224 1830 138 0 51 chr17 62332171 62332482 -23105998 + AluJb SINE Alu 1 295 -17 876 213 142 140 chr17 62332482 62332708 -23105772 + MLT1E LTR MaLR 369 593 0 1834 170 0 7 chr17 62332708 62333008 -23105472 + AluJo SINE Alu 1 298 -14 24 0 0 0 chr17 62333008 62333032 -23105448 + AT_rich Low_complexity Low_complexity 1 24 0 1151 197 219 13 chr17 62333557 62334013 -23104467 + L1M4 LINE L1 1945 2494 -3890 686 242 9 27 chr17 62334008 62334231 -23104249 + L1M4 LINE L1 5183 5401 -981 * 427 200 8 108 chr17 62334806 62334936 -23103544 + MLT1H LTR MaLR 405 521 -28 664 351 37 6 chr17 62336593 62336915 -23101565 + L1MEc LINE L1 41 372 -6024 715 238 27 0 chr17 62336966 62337113 -23101367 - MER5A DNA MER1_type -37 152 2 15703 121 17 1 chr17 62337233 62339613 -23098867 - Tigger1 DNA MER2_type 0 2418 1 2127 135 3 0 chr17 62340340 62340651 -23097829 - AluJb SINE Alu 0 312 1 21 0 0 0 chr17 62341013 62341034 -23097446 + AT_rich Low_complexity Low_complexity 1 21 0 489 207 96 7 chr17 62341330 62341465 -23097015 + MIR SINE MIR 84 230 -32 476 159 0 43 chr17 62341470 62341608 -23096872 + (CTA)n Simple_repeat Simple_repeat 1 132 0 461 307 93 68 chr17 62341830 62342050 -23096430 + L1M4c LINE L1 2891 3104 -3278 1774 173 14 0 chr17 62342050 62342333 -23096147 - AluJo SINE Alu -25 287 1 461 307 93 68 chr17 62342333 62342626 -23095854 + L1M4c LINE L1 3104 3417 -2965 4511 219 85 10 chr17 62342935 62344355 -23094125 + L1M3 LINE L1 2282 3797 -2585 32 0 0 0 chr17 62344355 62344387 -23094093 + AT_rich Low_complexity Low_complexity 1 32 0 1825 167 0 7 chr17 62344409 62344696 -23093784 - AluJo SINE Alu -21 291 7 2116 118 45 24 chr17 62344721 62345051 -23093429 + MER1B DNA MER1_type 1 337 0 3527 186 53 17 chr17 62345074 62345520 -23092960 + L1M3 LINE L1 4815 5243 -1161 2417 65 0 3 chr17 62345520 62345811 -23092669 + AluSc SINE Alu 1 290 -19 3527 186 53 17 chr17 62345811 62346376 -23092104 + L1M3 LINE L1 5243 5847 -557 2517 189 68 7 chr17 62346388 62346933 -23091547 - L1 LINE L1 -1674 4472 3895 4067 186 56 23 chr17 62346937 62348173 -23090307 + L1MB4 LINE L1 4893 6174 -6 387 248 41 108 chr17 62348191 62348440 -23090040 + L1ME3A LINE L1 5788 6013 -157 2254 100 7 0 chr17 62348440 62348731 -23089749 - AluSx SINE Alu -19 293 1 387 248 41 108 chr17 62348731 62348795 -23089685 + L1ME3A LINE L1 6013 6080 -90 23 0 0 0 chr17 62348861 62348884 -23089596 + AT_rich Low_complexity Low_complexity 1 23 0 206 282 113 0 chr17 62348917 62348988 -23089492 - L2 LINE L2 -656 2658 2580 904 217 110 75 chr17 62348996 62349434 -23089046 + LTR37B LTR ERV1 6 458 -10 398 345 96 34 chr17 62349446 62349585 -23088895 - L2 LINE L2 -756 2558 2429 2378 156 49 5 chr17 62349585 62349995 -23088485 + MSTC LTR MaLR 1 428 0 398 345 96 34 chr17 62349995 62350240 -23088240 - L2 LINE L2 -885 2429 2150 1504 164 80 39 chr17 62350268 62350438 -23088042 - AluJo SINE Alu -14 298 110 207 0 0 0 chr17 62350438 62350461 -23088019 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1504 164 80 39 chr17 62350461 62350576 -23087904 - AluJo SINE Alu -202 110 1 1271 229 131 53 chr17 62350581 62351205 -23087275 + L2 LINE L2 2478 3143 -170 1355 193 52 99 chr17 62351205 62351658 -23086822 - MLT1A2 LTR MaLR 0 467 1 550 258 48 30 chr17 62351659 62351826 -23086654 + L2 LINE L2 3140 3309 -4 2026 149 3 0 chr17 62351942 62352244 -23086236 + AluJb SINE Alu 1 303 -9 204 182 0 0 chr17 62352371 62352415 -23086065 + CT-rich Low_complexity Low_complexity 1 44 0 273 339 148 35 chr17 62352415 62352645 -23085835 - L2 LINE L2 -2798 516 261 1822 176 23 3 chr17 62354382 62354688 -23083792 + AluJb SINE Alu 1 312 0 362 209 18 0 chr17 62355253 62355363 -23083117 + L1MA7 LINE L1 2699 2810 -4039 1427 157 17 94 chr17 62355371 62355670 -23082810 + AluJo SINE Alu 5 280 -32 342 0 0 0 chr17 62355670 62355708 -23082772 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 1707 252 24 31 chr17 62355712 62356252 -23082228 + L1MA7 LINE L1 2818 3353 -3495 1219 117 38 19 chr17 62356252 62356465 -23082015 - Tigger1 DNA MER2_type 0 2418 2202 908 144 0 60 chr17 62356454 62356621 -23081859 - Tigger1 DNA MER2_type -2261 157 1 * 12707 166 37 13 chr17 62356621 62359612 -23078868 + L1MA7 LINE L1 3352 6418 -575 792 169 14 0 chr17 62359614 62359756 -23078724 + L1MA7 LINE L1 6550 6693 -300 * 803 105 38 8 chr17 62359754 62359887 -23078593 - L1MB2 LINE L1 -191 5980 5844 378 151 5 11 chr17 62359887 62359956 -23078524 - MLT1E3 LTR MaLR -45 573 479 578 161 54 0 chr17 62359957 62360069 -23078411 + L1MC1 LINE L1 6201 6318 -15 971 212 84 27 chr17 62361535 62361870 -23076610 + MSTD LTR MaLR 1 396 0 329 247 0 11 chr17 62361966 62362059 -23076421 + L1MC4 LINE L1 6612 6703 -1339 261 0 0 0 chr17 62362059 62362088 -23076392 + (TA)n Simple_repeat Simple_repeat 1 29 0 2353 97 6 0 chr17 62362088 62362399 -23076081 - AluSq SINE Alu 0 313 1 288 0 0 0 chr17 62362494 62362526 -23075954 + (CA)n Simple_repeat Simple_repeat 1 32 0 185 306 97 28 chr17 62362813 62362885 -23075595 + MIR SINE MIR 22 98 -110 224 292 0 0 chr17 62362896 62362944 -23075536 + L2 LINE L2 3224 3271 -1 1571 155 33 19 chr17 62363948 62364219 -23074261 - AluJo SINE Alu -17 295 21 905 136 8 0 chr17 62364262 62364394 -23074086 - AluSq/x SINE Alu -180 133 1 236 306 0 35 chr17 62364780 62364865 -23073615 + L2 LINE L2 3231 3312 -1 1814 207 80 111 chr17 62365322 62365997 -23072483 + MLT1E1 LTR MaLR 1 654 0 2759 242 33 21 chr17 62366283 62367034 -23071446 + L1MCb LINE L1 3 762 -5283 1096 242 48 68 chr17 62367215 62367739 -23070741 + L1MCb LINE L1 2188 2700 -3864 * 1580 178 39 0 chr17 62367737 62368046 -23070434 + L1MB7 LINE L1 5796 6116 -68 * 4008 165 46 29 chr17 62368034 62368342 -23070138 + L1MB4 LINE L1 5304 5605 -575 2238 102 0 7 chr17 62368342 62368636 -23069844 + AluSx SINE Alu 1 292 -20 4008 165 46 29 chr17 62368636 62368822 -23069658 + L1MB4 LINE L1 5605 5786 -394 468 0 0 0 chr17 62368822 62368874 -23069606 + (TA)n Simple_repeat Simple_repeat 1 52 0 4008 165 46 29 chr17 62368874 62369201 -23069279 + L1MB4 LINE L1 5786 6144 -36 2369 94 3 0 chr17 62369201 62369508 -23068972 + AluSp SINE Alu 1 308 -5 4008 165 46 29 chr17 62369508 62369546 -23068934 + L1MB4 LINE L1 6144 6180 0 253 249 103 79 chr17 62369539 62369704 -23068776 + HAL1 LINE L1 2332 2500 -7 * 7526 36 1 0 chr17 62369944 62371262 -23067218 + L1PA6 LINE L1 4860 6154 0 283 56 0 0 chr17 62371262 62371298 -23067182 + MLT1F LTR MaLR 462 497 -45 27 62 0 0 chr17 62372256 62372304 -23066176 + AT_rich Low_complexity Low_complexity 1 48 0 1922 157 7 0 chr17 62372553 62372846 -23065634 - AluJb SINE Alu -17 295 1 328 241 15 51 chr17 62373744 62373881 -23064599 + L1MC4 LINE L1 7907 8038 -4 2034 124 29 104 chr17 62373896 62373926 -23064554 + L1MB2 LINE L1 5759 5790 -381 4390 165 65 24 chr17 62373926 62374755 -23063725 - MER21B LTR ERV1 0 863 1 2034 124 29 104 chr17 62374755 62375167 -23063313 + L1MB2 LINE L1 5790 6168 -3 270 284 27 0 chr17 62375481 62375555 -23062925 - MER20B DNA MER1_type -654 129 54 186 308 39 0 chr17 62375833 62375885 -23062595 - L2 LINE L2 -14 3258 3205 752 186 0 16 chr17 62375960 62376089 -23062391 + FLAM_A SINE Alu 1 127 -6 1395 160 0 0 chr17 62376089 62376308 -23062172 + AluSg/x SINE Alu 88 306 -6 23 0 0 0 chr17 62376315 62376338 -23062142 + AT_rich Low_complexity Low_complexity 1 23 0 1685 143 59 4 chr17 62376338 62376610 -23061870 + AluSx SINE Alu 1 287 -25 2088 127 3 0 chr17 62377110 62377416 -23061064 + AluJb SINE Alu 1 307 0 297 238 186 29 chr17 62377851 62378023 -23060457 - MIR3 SINE MIR -1 207 9 248 250 29 29 chr17 62378178 62378246 -23060234 + MIR3 SINE MIR 114 181 -27 2432 80 0 0 chr17 62378305 62378607 -23059873 + AluSg SINE Alu 1 302 -8 4142 156 31 63 chr17 62378738 62378770 -23059710 + L1MB4 LINE L1 5023 5055 -1125 2604 45 0 6 chr17 62378770 62379081 -23059399 + AluY SINE Alu 3 311 0 4142 156 31 63 chr17 62379081 62380247 -23058233 + L1MB4 LINE L1 5055 6180 0 35 63 0 0 chr17 62380386 62380449 -23058031 + AT_rich Low_complexity Low_complexity 1 63 0 1678 164 17 31 chr17 62380459 62380751 -23057729 + AluJb SINE Alu 1 288 -24 2326 157 39 12 chr17 62381206 62381614 -23056866 + MSTB1 LTR MaLR 1 419 -13 296 318 173 17 chr17 62382412 62382591 -23055889 + HAL1 LINE L1 419 625 -1882 337 232 141 87 chr17 62382608 62382793 -23055687 + HAL1 LINE L1 2010 2204 -303 497 248 72 22 chr17 62382886 62383108 -23055372 + HAL1 LINE L1 2207 2439 -68 210 121 30 45 chr17 62383224 62383290 -23055190 + (TATAA)n Simple_repeat Simple_repeat 3 67 0 24 0 0 0 chr17 62383294 62383318 -23055162 + AT_rich Low_complexity Low_complexity 1 24 0 344 129 47 24 chr17 62383333 62383418 -23055062 - L1MB7 LINE L1 -3 6181 6095 498 150 22 25 chr17 62383433 62383748 -23054732 + (TA)n Simple_repeat Simple_repeat 1 314 0 379 98 60 27 chr17 62383765 62384102 -23054378 + (TA)n Simple_repeat Simple_repeat 1 348 0 352 133 41 82 chr17 62384114 62384212 -23054268 + L1MB7 LINE L1 6091 6184 0 809 316 72 31 chr17 62384224 62384298 -23054182 + L1ME4a LINE L1 4021 4091 -2055 2564 52 0 0 chr17 62384298 62384608 -23053872 - AluY SINE Alu -1 310 1 809 316 72 31 chr17 62384608 62385327 -23053153 + L1ME4a LINE L1 4091 4846 -1300 1689 169 0 53 chr17 62385340 62385475 -23053005 + AluJo SINE Alu 3 144 -168 1731 157 7 13 chr17 62385475 62385775 -23052705 + AluSx SINE Alu 1 298 -14 1689 169 0 53 chr17 62385775 62385959 -23052521 + AluJo SINE Alu 144 305 -7 21 36 0 0 chr17 62385959 62385987 -23052493 + AT_rich Low_complexity Low_complexity 1 28 0 437 290 152 8 chr17 62386248 62386603 -23051877 + L1ME4a LINE L1 5694 6099 -22 1207 227 43 67 chr17 62386614 62386927 -23051553 - L1ME3 LINE L1 0 6162 5843 2320 82 0 3 chr17 62386927 62387218 -23051262 + AluSp SINE Alu 1 290 -23 1207 227 43 67 chr17 62387218 62387309 -23051171 - L1ME3 LINE L1 -319 5843 5766 1629 146 53 4 chr17 62387309 62387590 -23050890 - AluJo SINE Alu -17 295 1 1207 227 43 67 chr17 62387590 62387603 -23050877 - L1ME3 LINE L1 -396 5766 5754 1328 228 3 48 chr17 62387835 62387871 -23050609 + L1M3c LINE L1 2 38 -6103 2184 121 0 0 chr17 62387871 62388178 -23050302 + AluSx SINE Alu 1 307 -5 1328 228 3 48 chr17 62388178 62388453 -23050027 + L1M3c LINE L1 38 299 -5842 1081 139 30 15 chr17 62388451 62388653 -23049827 + L1MA8 LINE L1 5758 5962 -329 * 3922 157 40 73 chr17 62388657 62388740 -23049740 + L1MC2 LINE L1 5487 5571 -773 1111 148 0 12 chr17 62388740 62388909 -23049571 - FAM SINE Alu -8 167 1 3922 157 40 73 chr17 62388909 62389704 -23048776 + L1MC2 LINE L1 5571 6336 -8 28 29 0 0 chr17 62390117 62390152 -23048328 + AT_rich Low_complexity Low_complexity 1 35 0 972 327 50 28 chr17 62390829 62390989 -23047491 - L2 LINE L2 -3 3310 3155 2314 102 62 8 chr17 62390989 62391362 -23047118 + L1PA13 LINE L1 5770 6162 -1 972 327 50 28 chr17 62391362 62391766 -23046714 - L2 LINE L2 -158 3155 2734 7359 114 6 5 chr17 62391767 62393314 -23045166 - L1MA2 LINE L1 0 6304 4759 1865 345 69 17 chr17 62393331 62394277 -23044203 - L2 LINE L2 -571 2743 1749 1541 257 114 47 chr17 62394286 62395030 -23043450 + L1MC4a LINE L1 5177 5403 -743 24 0 0 0 chr17 62395439 62395463 -23043017 + AT_rich Low_complexity Low_complexity 1 24 0 398 256 171 68 chr17 62396600 62396834 -23041646 + MLT1K LTR MaLR 156 413 -175 301 194 0 15 chr17 62396836 62396903 -23041577 + MLT1K LTR MaLR 523 588 0 229 135 19 58 chr17 62398240 62398292 -23040188 - Alu SINE Alu -133 170 121 299 239 45 0 chr17 62398720 62398808 -23039672 - L1ME4a LINE L1 -83 6038 5947 1425 211 4 0 chr17 62398875 62399150 -23039330 + AluJo SINE Alu 33 308 -4 696 266 122 51 chr17 62399290 62399757 -23038723 - L1ME4a LINE L1 -303 5818 5319 1486 156 57 25 chr17 62399763 62400045 -23038435 - AluSx SINE Alu -17 295 5 755 160 15 0 chr17 62400085 62400216 -23038264 + FLAM_C SINE Alu 1 133 -10 514 97 0 0 chr17 62400224 62400296 -23038184 + AluJ/FRAM SINE Alu 220 291 -21 354 230 108 12 chr17 62400495 62400690 -23037790 + L1MC4a LINE L1 5693 5823 -298 28 79 0 0 chr17 62400922 62400985 -23037495 + AT_rich Low_complexity Low_complexity 1 63 0 402 21 0 0 chr17 62401066 62401075 -23037405 + (TG)n Simple_repeat Simple_repeat 1 56 0 402 21 0 0 chr17 62401075 62401122 -23037358 + (TG)n Simple_repeat Simple_repeat 2 48 0 1305 124 35 5 chr17 62401146 62401347 -23037133 - AluSx SINE Alu -105 207 1 44 46 0 0 chr17 62401381 62401446 -23037034 + AT_rich Low_complexity Low_complexity 1 65 0 355 233 0 0 chr17 62401543 62401603 -23036877 + AluJ/FLAM SINE Alu 1 60 -242 423 0 0 0 chr17 62401619 62401666 -23036814 + (TG)n Simple_repeat Simple_repeat 2 48 0 198 167 0 0 chr17 62401711 62401747 -23036733 + (TA)n Simple_repeat Simple_repeat 1 36 0 357 270 103 60 chr17 62402158 62402343 -23036137 + MIR3 SINE MIR 16 208 0 280 188 0 0 chr17 62402321 62402369 -23036111 + L3 LINE CR1 1526 1573 -4 * 21 57 0 0 chr17 62403099 62403134 -23035346 + AT_rich Low_complexity Low_complexity 1 35 0 2001 99 21 7 chr17 62403374 62403657 -23034823 - AluSx SINE Alu -25 287 1 21 0 0 0 chr17 62405980 62406001 -23032479 + AT_rich Low_complexity Low_complexity 1 21 0 2083 118 6 6 chr17 62407874 62408187 -23030293 - AluSp SINE Alu 0 313 1 2074 138 0 0 chr17 62408334 62408638 -23029842 + AluSx SINE Alu 1 304 -8 240 403 43 7 chr17 62409967 62410106 -23028374 + L2 LINE L2 3129 3272 0 1173 247 139 38 chr17 62411037 62411591 -23026889 + L1ME4a LINE L1 5257 5866 -304 1267 249 12 3 chr17 62413462 62413796 -23024684 + L1MC4 LINE L1 7090 7426 -616 444 194 29 10 chr17 62413803 62413906 -23024574 + HAL1b LINE L1 586 690 -658 227 212 82 35 chr17 62413916 62414001 -23024479 + L1ME3A LINE L1 6082 6170 0 276 169 270 0 chr17 62414007 62414096 -23024384 + L1ME4a LINE L1 6008 6120 -1 589 217 174 6 chr17 62414223 62414384 -23024096 + MER3 DNA MER1_type 1 188 -21 738 180 0 0 chr17 62414735 62414857 -23023623 + FLAM_C SINE Alu 1 122 -11 6971 87 13 14 chr17 62415399 62415568 -23022912 + L1MA3 LINE L1 5304 5472 -833 2309 94 0 0 chr17 62415568 62415866 -23022614 + AluSx SINE Alu 1 298 -14 6971 87 13 14 chr17 62415866 62416699 -23021781 + L1MA3 LINE L1 5472 6305 0 231 267 22 11 chr17 62416799 62416889 -23021591 + L1 LINE L1 4946 5036 -1110 * 265 315 0 0 chr17 62416885 62416958 -23021522 + HAL1 LINE L1 1 73 -2434 603 328 100 4 chr17 62416973 62417223 -23021257 + Charlie8 DNA MER1_type 3 276 -2141 2734 124 68 48 chr17 62417319 62417332 -23021148 - MER51A LTR ERV1 -117 517 506 2264 122 0 0 chr17 62417332 62417643 -23020837 + AluSx SINE Alu 1 311 -1 2734 124 68 48 chr17 62417643 62418149 -23020331 - MER51A LTR ERV1 -128 506 1 1207 155 0 10 chr17 62418184 62418377 -23020103 - AluJo SINE Alu -4 308 118 485 234 66 66 chr17 62418387 62418554 -23019926 - FAM SINE Alu -8 167 1 271 243 191 7 chr17 62419938 62420074 -23018406 + L1MEc LINE L1 38 198 -6198 553 249 102 28 chr17 62420089 62420414 -23018066 + L1MEc LINE L1 1028 1376 -5020 360 0 0 0 chr17 62420422 62420462 -23018018 + (CA)n Simple_repeat Simple_repeat 2 41 0 1901 114 54 4 chr17 62420499 62420779 -23017701 - AluSq SINE Alu -19 294 1 347 268 36 1 chr17 62420800 62420924 -23017556 + L1MDa LINE L1 412 1517 -810 4908 162 48 18 chr17 62420926 62421593 -23016887 + L1MB4 LINE L1 4588 5234 -946 6897 161 12 39 chr17 62421593 62421668 -23016812 + L1PA13 LINE L1 4020 4095 -2068 2404 90 0 0 chr17 62421668 62421979 -23016501 + AluY SINE Alu 1 311 0 6897 161 12 39 chr17 62421979 62422287 -23016193 + L1PA13 LINE L1 4095 4410 -1753 423 0 0 0 chr17 62422287 62422334 -23016146 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6897 161 12 39 chr17 62422334 62424108 -23014372 + L1PA13 LINE L1 4410 6163 0 1800 163 3 3 chr17 62424111 62424399 -23014081 + AluSx SINE Alu 1 288 -24 4908 162 48 18 chr17 62424399 62425236 -23013244 + L1MB4 LINE L1 5235 6179 -1 5765 226 115 32 chr17 62425277 62426593 -23011887 + L1MDa LINE L1 1637 2843 -3303 2291 95 0 3 chr17 62426593 62426898 -23011582 - AluSq SINE Alu -9 304 1 5765 226 115 32 chr17 62426898 62428133 -23010347 + L1MDa LINE L1 2843 4369 -1777 2128 139 12 0 chr17 62428131 62428468 -23010012 - L1MB3 LINE L1 -258 5925 5585 * 1918 223 85 28 chr17 62428484 62429014 -23009466 + L1MC4 LINE L1 6525 7084 -958 1948 237 99 14 chr17 62429036 62429630 -23008850 + L1MC4 LINE L1 7261 7905 -137 2072 130 0 3 chr17 62430052 62430351 -23008129 + AluSx SINE Alu 1 298 -14 227 125 0 0 chr17 62430503 62430535 -23007945 - MER58A DNA MER1_type -3 221 190 966 209 36 10 chr17 62430581 62430777 -23007703 - MER58A DNA MER1_type -23 201 1 211 125 62 31 chr17 62430909 62430973 -23007507 + (TA)n Simple_repeat Simple_repeat 1 66 0 1174 218 118 72 chr17 62431165 62431623 -23006857 + MLT1H LTR MaLR 17 495 -54 21 57 0 0 chr17 62431812 62431847 -23006633 + AT_rich Low_complexity Low_complexity 1 35 0 422 260 60 7 chr17 62431903 62432053 -23006427 + HAL1 LINE L1 1933 2090 -417 329 255 60 50 chr17 62432139 62432339 -23006141 + HAL1 LINE L1 2265 2466 -41 371 364 75 13 chr17 62432371 62432599 -23005881 + L1M4 LINE L1 4802 5043 -1103 2036 130 7 16 chr17 62432773 62433080 -23005400 - AluJb SINE Alu -8 304 1 399 238 75 20 chr17 62433224 62433371 -23005109 - L2 LINE L2 0 3313 3159 24 0 0 0 chr17 62433376 62433400 -23005080 + AT_rich Low_complexity Low_complexity 1 24 0 769 235 48 0 chr17 62433555 62433742 -23004738 + MIR SINE MIR 1 196 -66 262 161 16 81 chr17 62433832 62433894 -23004586 + MIR SINE MIR 189 246 -16 216 238 48 0 chr17 62433961 62434024 -23004456 + GA-rich Low_complexity Low_complexity 3 68 0 522 47 0 0 chr17 62434947 62435011 -23003469 - AluY SINE Alu -234 77 14 1661 55 15 0 chr17 62435011 62435258 -23003222 + AluY SINE Alu 82 331 0 24 0 0 0 chr17 62435428 62435452 -23003028 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 62435957 62435986 -23002494 + AT_rich Low_complexity Low_complexity 1 29 0 1972 125 20 10 chr17 62436741 62437045 -23001435 + AluSx SINE Alu 1 307 -5 836 163 0 0 chr17 62437159 62437282 -23001198 + FLAM_C SINE Alu 1 123 -10 4304 137 56 14 chr17 62437316 62438388 -23000092 + L1MA5 LINE L1 4557 5665 -635 1403 183 4 16 chr17 62438388 62438645 -22999835 - AluJo SINE Alu -58 254 1 3474 134 15 21 chr17 62438649 62439260 -22999220 + L1MA5 LINE L1 5693 6299 -1 189 213 0 0 chr17 62439366 62439413 -22999067 + (CTA)n Simple_repeat Simple_repeat 2 48 0 692 253 50 40 chr17 62439415 62439613 -22998867 - MIR SINE MIR -22 240 41 2601 164 28 42 chr17 62439613 62440096 -22998384 + L1MA9 LINE L1 5724 6199 -113 2027 165 72 10 chr17 62440096 62440497 -22997983 + MSTB LTR MaLR 1 426 0 2601 164 28 42 chr17 62440497 62440580 -22997900 + L1MA9 LINE L1 6199 6282 -30 1856 166 3 16 chr17 62440586 62440893 -22997587 - AluJo SINE Alu -9 303 1 217 179 0 0 chr17 62440917 62440956 -22997524 - MIR SINE MIR -212 50 12 1590 208 0 16 chr17 62440967 62441275 -22997205 + AluJo SINE Alu 1 303 -9 503 259 86 0 chr17 62441459 62441598 -22996882 + MIR SINE MIR 41 191 -71 329 309 184 0 chr17 62441598 62441766 -22996714 - L2 LINE L2 -3 3310 3112 1318 165 39 40 chr17 62441982 62442566 -22995914 - Charlie1a DNA MER1_type -561 894 242 2017 68 0 4 chr17 62442607 62442856 -22995624 + AluY SINE Alu 43 290 -21 30 0 0 0 chr17 62442856 62442886 -22995594 + AT_rich Low_complexity Low_complexity 1 30 0 387 60 0 0 chr17 62442891 62442941 -22995539 + (GA)n Simple_repeat Simple_repeat 2 51 0 882 224 14 56 chr17 62442941 62443049 -22995431 - Charlie1a DNA MER1_type -2556 205 109 2084 126 3 7 chr17 62443049 62443351 -22995129 - AluJb SINE Alu -11 301 1 882 224 14 56 chr17 62443351 62443456 -22995024 - Charlie1a DNA MER1_type -2652 109 1 395 259 80 37 chr17 62443491 62443653 -22994827 - MIR3 SINE MIR 0 208 40 24 0 0 0 chr17 62444814 62444838 -22993642 + AT_rich Low_complexity Low_complexity 1 24 0 1456 176 0 101 chr17 62444840 62445176 -22993304 - AluJo SINE Alu 0 302 1 417 307 14 29 chr17 62446412 62446552 -22991928 - MIR SINE MIR -112 150 13 2418 74 7 0 chr17 62446769 62447065 -22991415 - AluSp SINE Alu -15 298 1 2031 128 3 7 chr17 62447210 62447508 -22990972 + AluSx SINE Alu 1 297 -15 2416 92 0 0 chr17 62447610 62447913 -22990567 + AluSx SINE Alu 1 303 -9 731 303 51 28 chr17 62448042 62448435 -22990045 - L1M4 LINE L1 -1104 5042 4641 839 196 35 79 chr17 62448503 62448732 -22989748 + MER20 DNA MER1_type 1 219 0 2073 194 127 82 chr17 62449009 62449051 -22989429 + L1ME3A LINE L1 5285 5324 -846 2063 142 3 0 chr17 62449051 62449353 -22989127 + AluSx SINE Alu 1 303 -9 2073 194 127 82 chr17 62449353 62450141 -22988339 + L1ME3A LINE L1 5324 6150 -20 962 171 10 16 chr17 62450256 62450449 -22988031 + L1ME1 LINE L1 4840 5031 -1115 2881 203 54 49 chr17 62450461 62450658 -22987822 + L1ME1 LINE L1 5254 5449 -717 1336 213 27 30 chr17 62450658 62450954 -22987526 + AluJb SINE Alu 1 295 -17 2881 203 54 49 chr17 62450954 62451089 -22987391 + L1ME1 LINE L1 5449 5582 -584 2174 113 13 0 chr17 62451089 62451389 -22987091 + AluSx SINE Alu 1 304 -8 2881 203 54 49 chr17 62451389 62451847 -22986633 + L1ME1 LINE L1 5582 6049 -117 434 200 28 76 chr17 62451872 62451960 -22986520 + L1MA10 LINE L1 6190 6270 -64 2147 129 0 3 chr17 62451960 62452262 -22986218 + AluSx SINE Alu 1 301 -11 434 200 28 76 chr17 62452262 62452318 -22986162 + L1MA10 LINE L1 6270 6327 -7 578 352 76 17 chr17 62452380 62452786 -22985694 - L2 LINE L2 0 3313 2884 450 289 50 96 chr17 62452806 62453024 -22985456 + MLT1L LTR MaLR 1 208 -407 2030 153 0 0 chr17 62453336 62453637 -22984843 - AluJb SINE Alu -11 301 1 28 91 0 0 chr17 62453637 62453714 -22984766 + AT_rich Low_complexity Low_complexity 1 77 0 2500 167 69 13 chr17 62453778 62454335 -22984145 - L1M4 LINE L1 -406 5768 5188 1251 155 0 57 chr17 62454338 62454664 -22983816 - AluJb SINE Alu 0 348 1 1984 191 21 9 chr17 62454664 62455083 -22983397 - L1M4 LINE L1 -946 5200 4777 320 329 96 70 chr17 62455401 62455802 -22982678 - L2 LINE L2 -1 3271 2882 2285 105 3 0 chr17 62455802 62456107 -22982373 + AluSx SINE Alu 4 309 -3 320 329 96 70 chr17 62456107 62456307 -22982173 - L2 LINE L2 -390 2882 2626 1951 118 3 48 chr17 62456307 62456621 -22981859 - AluJb SINE Alu -12 300 1 320 329 96 70 chr17 62456621 62456665 -22981815 - L2 LINE L2 -646 2626 2585 297 309 60 0 chr17 62456813 62456897 -22981583 + MIR SINE MIR 20 108 -154 1447 158 0 4 chr17 62456925 62457153 -22981327 - AluSx SINE Alu -85 227 1 377 307 58 97 chr17 62457469 62457811 -22980669 + L2 LINE L2 2943 3271 -1 515 290 115 6 chr17 62457961 62458144 -22980336 + MIR SINE MIR 41 243 -19 266 304 11 22 chr17 62459831 62459923 -22978557 - MIR SINE MIR -106 156 66 561 140 20 10 chr17 62460915 62461015 -22977465 + L1MB7 LINE L1 6071 6171 -13 2424 75 13 0 chr17 62461017 62461322 -22977158 - AluY SINE Alu -2 309 1 623 230 50 31 chr17 62461858 62462019 -22976461 - MIR3 SINE MIR -10 198 35 308 353 49 20 chr17 62462373 62462577 -22975903 + L1ME LINE L1 5512 5721 -400 28 0 0 0 chr17 62462882 62462910 -22975570 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 62464722 62464745 -22973735 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr17 62466263 62466294 -22972186 + AT_rich Low_complexity Low_complexity 1 31 0 303 308 0 0 chr17 62466346 62466424 -22972056 + L2 LINE L2 3234 3311 -2 21 0 0 0 chr17 62466829 62466850 -22971630 + AT_rich Low_complexity Low_complexity 1 21 0 971 147 0 0 chr17 62467485 62467628 -22970852 - AluJo SINE Alu -30 282 140 496 77 0 0 chr17 62467628 62467693 -22970787 - MSTB LTR MaLR -359 67 3 893 140 0 40 chr17 62467693 62467843 -22970637 - AluJo SINE Alu -168 144 1 485 327 53 7 chr17 62468078 62468228 -22970252 - MIR3 SINE MIR -35 173 17 2355 106 3 0 chr17 62469195 62469506 -22968974 + AluSp SINE Alu 1 312 -1 235 218 36 0 chr17 62469777 62469832 -22968648 - MER112 DNA MER1_type -196 64 8 2087 149 0 0 chr17 62470350 62470658 -22967822 - AluJb SINE Alu -2 310 3 192 313 114 30 chr17 62471850 62471981 -22966499 + MIR3 SINE MIR 7 148 -60 1419 229 71 20 chr17 62472478 62472884 -22965596 + MARNA DNA Mariner 4 430 -156 205 175 25 0 chr17 62472986 62473026 -22965454 - L2 LINE L2 -4 3268 3228 934 337 169 15 chr17 62473038 62474136 -22964344 - L2 LINE L2 0 3272 1998 573 373 80 29 chr17 62475850 62476466 -22962014 - L2 LINE L2 -1434 1880 1234 2218 108 7 7 chr17 62476680 62476986 -22961494 + AluSg SINE Alu 1 306 -4 356 246 26 70 chr17 62477002 62477116 -22961364 + L1ME3A LINE L1 5962 6070 -100 1682 225 216 17 chr17 62477116 62477640 -22960840 - MLT2E LTR ERVL 0 628 1 194 283 0 19 chr17 62477838 62477891 -22960589 - L2 LINE L2 -203 3069 3018 582 255 117 0 chr17 62477899 62478087 -22960393 - MIR SINE MIR 0 262 53 1899 162 0 17 chr17 62478138 62478440 -22960040 - AluJb SINE Alu -15 297 1 250 372 103 14 chr17 62478511 62478734 -22959746 - L2 LINE L2 -352 2962 2720 1785 171 0 28 chr17 62478812 62479133 -22959347 - AluJo SINE Alu 0 312 1 467 235 54 71 chr17 62479180 62479352 -22959128 - MIR SINE MIR -74 188 16 32 75 0 0 chr17 62481132 62481199 -22957281 + AT_rich Low_complexity Low_complexity 1 67 0 199 105 105 26 chr17 62482210 62482248 -22956232 - MIR3 SINE MIR -42 166 126 282 232 12 49 chr17 62482326 62482408 -22956072 + MIR SINE MIR 184 262 0 559 147 0 0 chr17 62482413 62482508 -22955972 - FLAM_C SINE Alu -9 134 40 280 333 0 18 chr17 62482607 62482718 -22955762 + L2 LINE L2 3161 3269 -44 344 234 57 57 chr17 62484649 62484773 -22953707 + LTR67 LTR ERVL 428 551 -6 694 309 63 90 chr17 62484787 62484887 -22953593 + L2 LINE L2 2487 2588 -725 1824 132 73 10 chr17 62484887 62485055 -22953425 - AluJo SINE Alu -6 306 111 206 0 0 65 chr17 62485055 62485086 -22953394 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1824 132 73 10 chr17 62485086 62485205 -22953275 - AluJo SINE Alu -201 111 1 694 309 63 90 chr17 62485205 62485516 -22952964 + L2 LINE L2 2588 2906 -407 2409 88 0 0 chr17 62485516 62485823 -22952657 - AluSg SINE Alu -3 307 1 694 309 63 90 chr17 62485823 62485976 -22952504 + L2 LINE L2 2906 3062 -251 2187 124 3 0 chr17 62485976 62486275 -22952205 + AluSx SINE Alu 1 300 -12 694 309 63 90 chr17 62486275 62486554 -22951926 + L2 LINE L2 3062 3313 0 723 321 89 51 chr17 62486555 62486948 -22951532 + L2 LINE L2 2454 2861 -453 248 250 47 0 chr17 62487082 62487146 -22951334 + L2 LINE L2 3159 3225 -88 479 246 37 30 chr17 62487178 62487312 -22951168 - MER112 DNA MER1_type -11 249 115 348 161 0 0 chr17 62487314 62487376 -22951104 + (TG)n Simple_repeat Simple_repeat 1 62 0 2253 120 3 0 chr17 62487384 62487684 -22950796 - AluSx SINE Alu -11 301 1 1968 213 48 6 chr17 62487972 62488469 -22950011 + L1ME1 LINE L1 2416 2933 -3213 1611 259 71 2 chr17 62488470 62489046 -22949434 + L1ME1 LINE L1 2994 3609 -2537 695 156 89 44 chr17 62489035 62489075 -22949405 + L1ME1 LINE L1 4665 4702 -1444 * 2182 4 0 0 chr17 62489075 62489310 -22949170 + AluYb8 SINE Alu 82 316 -2 695 156 89 44 chr17 62489310 62489449 -22949031 + L1ME1 LINE L1 4702 4852 -1294 1441 163 0 9 chr17 62489479 62489706 -22948774 - AluJb SINE Alu -87 225 1 3840 197 50 31 chr17 62489706 62490986 -22947494 + L1ME1 LINE L1 4845 6156 -10 2282 97 3 0 chr17 62490986 62491275 -22947205 + AluSx SINE Alu 1 290 -22 24 67 0 0 chr17 62491275 62491320 -22947160 + AT_rich Low_complexity Low_complexity 1 45 0 2351 88 0 10 chr17 62491359 62491666 -22946814 + AluY SINE Alu 1 304 -7 2127 86 0 7 chr17 62491821 62492100 -22946380 + AluSx SINE Alu 31 307 -5 285 313 57 48 chr17 62492116 62492289 -22946191 + L1ME LINE L1 5246 5416 -705 2266 96 0 25 chr17 62492289 62492603 -22945877 - AluSx SINE Alu -5 307 2 285 313 57 48 chr17 62492603 62492852 -22945628 + L1ME LINE L1 5416 5665 -456 276 240 0 13 chr17 62492853 62492928 -22945552 + L1ME LINE L1 5709 5782 -380 2075 86 38 14 chr17 62493142 62493433 -22945047 + AluSx SINE Alu 3 300 -12 2286 101 0 0 chr17 62493506 62493802 -22944678 + AluSq SINE Alu 1 296 -17 263 274 42 83 chr17 62496231 62496399 -22942081 + L2 LINE L2 3148 3308 -5 2105 133 0 3 chr17 62496442 62496742 -22941738 + AluSq SINE Alu 1 299 -14 266 230 0 23 chr17 62496932 62497019 -22941461 + (CATATA)n Simple_repeat Simple_repeat 4 88 0 2140 128 0 6 chr17 62497154 62497466 -22941014 + AluSx SINE Alu 1 310 -2 339 25 0 0 chr17 62498338 62498378 -22940102 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1918 150 0 0 chr17 62498384 62498670 -22939810 - AluJb SINE Alu -26 286 1 32 0 0 0 chr17 62498676 62498708 -22939772 + AT_rich Low_complexity Low_complexity 1 32 0 395 118 0 0 chr17 62498708 62498759 -22939721 - MER66B LTR ERV1 -141 345 295 1868 259 95 48 chr17 62499005 62499199 -22939281 + MER21B LTR ERV1 1 184 -679 2576 34 3 0 chr17 62499199 62499492 -22938988 + AluY SINE Alu 1 294 -17 1868 259 95 48 chr17 62499492 62500003 -22938477 + MER21B LTR ERV1 184 739 -124 516 16 0 0 chr17 62502369 62502430 -22936050 + (TG)n Simple_repeat Simple_repeat 2 62 0 820 309 101 2 chr17 62503229 62503663 -22934817 + L1M4 LINE L1 1252 1728 -4656 * 1666 217 83 25 chr17 62503659 62504051 -22934429 - L1M4 LINE L1 -1801 4345 3918 2374 94 0 0 chr17 62504051 62504350 -22934130 - AluY SINE Alu -12 299 1 1666 217 83 25 chr17 62504350 62504440 -22934040 - L1M4 LINE L1 -2228 3918 3835 294 187 98 8 chr17 62504432 62504530 -22933950 - L1MC3 LINE L1 -1 7994 7680 * 658 226 39 6 chr17 62504556 62504737 -22933743 + L1M4 LINE L1 4692 4878 -1504 244 158 23 0 chr17 62504736 62504795 -22933685 - L1MC4a LINE L1 -92 7716 6085 * 950 175 81 36 chr17 62504799 62505022 -22933458 - L1MD2 LINE L1 -215 6538 6306 2501 191 8 42 chr17 62505024 62505520 -22932960 - MLT2B3 LTR ERVL -5 549 71 536 116 0 35 chr17 62505595 62505681 -22932799 - MLT2B3 LTR ERVL -469 85 3 3612 204 36 30 chr17 62505682 62507210 -22931270 - L1MD2 LINE L1 -451 6302 4764 * 5785 235 62 44 chr17 62507201 62508635 -22929845 - L1M4 LINE L1 -1482 4664 3258 1702 192 10 0 chr17 62508635 62508932 -22929548 - AluJb SINE Alu 0 312 13 5785 235 62 44 chr17 62508932 62509189 -22929291 - L1M4 LINE L1 -2888 3258 3007 290 26 26 0 chr17 62509189 62509228 -22929252 + (TA)n Simple_repeat Simple_repeat 2 41 0 5785 235 62 44 chr17 62509228 62509482 -22928998 - L1M4 LINE L1 -3139 3007 2759 2217 102 3 13 chr17 62509482 62509795 -22928685 + AluSq SINE Alu 4 313 0 5785 235 62 44 chr17 62509795 62510128 -22928352 - L1M4 LINE L1 -3387 2759 2342 1347 163 104 3 chr17 62510154 62510480 -22928000 - L1MD2 LINE L1 -4619 1921 1563 595 198 58 43 chr17 62510499 62510706 -22927774 - L1M4 LINE L1 -3293 2853 2644 * 652 187 108 47 chr17 62510692 62510906 -22927574 - L1MB8 LINE L1 0 6178 5952 4807 169 37 50 chr17 62510916 62511906 -22926574 - L1MB8 LINE L1 -15 6163 5162 2115 134 17 0 chr17 62511906 62512204 -22926276 - AluSx SINE Alu -9 303 1 4807 169 37 50 chr17 62512204 62512248 -22926232 - L1MB8 LINE L1 -1016 5162 5119 2119 105 35 38 chr17 62512248 62512365 -22926115 - AluSx SINE Alu 0 312 196 2201 119 0 0 chr17 62512365 62512660 -22925820 - AluSg1 SINE Alu -14 295 1 2119 105 35 38 chr17 62512660 62512855 -22925625 - AluSx SINE Alu -116 196 1 4807 169 37 50 chr17 62512855 62513155 -22925325 - L1MB8 LINE L1 -1059 5119 4857 1058 251 16 19 chr17 62513158 62513533 -22924947 - L1M4 LINE L1 -3483 2663 2290 3082 224 92 23 chr17 62513549 62514335 -22924145 + MER21B LTR ERV1 13 852 -11 10199 208 56 43 chr17 62514393 62516211 -22922269 - L1MA4 LINE L1 -6 6476 4683 1446 196 66 4 chr17 62516211 62516377 -22922103 - AluJo SINE Alu -14 298 107 206 81 27 0 chr17 62516377 62516414 -22922066 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1446 196 66 4 chr17 62516414 62516518 -22921962 - AluJo SINE Alu -205 107 11 10199 208 56 43 chr17 62516518 62519888 -22918592 - L1MA4 LINE L1 -1799 4683 627 2542 182 24 13 chr17 62519892 62520441 -22918039 - L1 LINE L1 -1188 4958 4404 385 306 113 8 chr17 62520466 62520590 -22917890 + L2 LINE L2 3136 3272 0 12670 142 18 18 chr17 62520594 62521142 -22917338 + L1MA3 LINE L1 2915 3461 -2844 2127 138 0 0 chr17 62521142 62521454 -22917026 + AluSx SINE Alu 1 312 0 12670 142 18 18 chr17 62521454 62524267 -22914213 + L1MA3 LINE L1 3461 6271 -34 2269 107 0 3 chr17 62524267 62524565 -22913915 + AluSx SINE Alu 1 297 -15 450 0 0 0 chr17 62524565 62524615 -22913865 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 12670 142 18 18 chr17 62524615 62524626 -22913854 + L1MA3 LINE L1 6270 6294 -11 2956 122 5 5 chr17 62524717 62525144 -22913336 + MSTA LTR MaLR 2 428 0 22 35 0 0 chr17 62525278 62525307 -22913173 + AT_rich Low_complexity Low_complexity 1 29 0 1006 150 0 7 chr17 62525981 62526134 -22912346 + FRAM SINE Alu 1 152 -14 25 0 0 0 chr17 62526204 62526229 -22912251 + AT_rich Low_complexity Low_complexity 1 25 0 530 266 71 30 chr17 62526725 62526894 -22911586 + MIR SINE MIR 25 200 -62 204 214 0 0 chr17 62527007 62527063 -22911417 + (TA)n Simple_repeat Simple_repeat 2 57 0 192 321 0 0 chr17 62527102 62527155 -22911325 - MIR SINE MIR -124 138 86 2042 131 0 0 chr17 62527472 62527762 -22910718 + AluJb SINE Alu 9 298 -14 195 155 17 35 chr17 62527895 62527953 -22910527 + CT-rich Low_complexity Low_complexity 5 61 0 236 310 0 17 chr17 62528188 62528246 -22910234 - MIR SINE MIR -133 75 19 24 32 0 0 chr17 62528597 62528628 -22909852 + AT_rich Low_complexity Low_complexity 1 31 0 570 136 25 8 chr17 62528747 62528865 -22909615 + CT-rich Low_complexity Low_complexity 1 120 0 2016 113 3 3 chr17 62531098 62531405 -22907075 - AluSx SINE Alu 0 307 1 732 233 159 37 chr17 62531424 62531637 -22906843 - L1ME3A LINE L1 -6 6164 5896 2357 78 10 3 chr17 62531637 62531945 -22906535 - AluSg SINE Alu 0 310 1 732 233 159 37 chr17 62531945 62532057 -22906423 - L1ME3A LINE L1 -274 5896 5799 1568 236 88 5 chr17 62532334 62532757 -22905723 - L1ME3A LINE L1 -396 5774 5317 2405 111 17 3 chr17 62532866 62533227 -22905253 + MER47A DNA MER2_type 1 366 0 1908 200 44 61 chr17 62533306 62533845 -22904635 + L1MC5 LINE L1 6992 7522 -439 2202 124 0 10 chr17 62533845 62534151 -22904329 + AluSq SINE Alu 1 303 -10 1908 200 44 61 chr17 62534151 62534202 -22904278 + L1MC5 LINE L1 7522 7572 -389 756 318 38 60 chr17 62534248 62534780 -22903700 + L1ME LINE L1 12 531 -5539 1590 281 83 30 chr17 62534871 62535809 -22902671 + L1ME LINE L1 521 1508 -4753 6528 152 33 138 chr17 62535844 62537418 -22901062 + L1MCa LINE L1 46 1784 -4642 1748 146 4 4 chr17 62537418 62537672 -22900808 + AluSx SINE Alu 7 260 -52 6528 152 33 138 chr17 62537672 62537990 -22900490 + L1MCa LINE L1 1784 1824 -4602 2346 74 10 10 chr17 62537990 62538289 -22900191 + AluSx SINE Alu 1 299 -13 6528 152 33 138 chr17 62538289 62538326 -22900154 + L1MCa LINE L1 1824 1863 -4563 191 36 36 0 chr17 62538341 62538369 -22900111 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1341 184 32 85 chr17 62538383 62538699 -22899781 + MLT1B LTR MaLR 86 384 -6 1374 138 172 0 chr17 62538700 62538990 -22899490 + L1MCa LINE L1 1861 2200 -4226 2024 134 18 15 chr17 62538991 62539333 -22899147 + L1MC1 LINE L1 5991 6333 0 3098 171 141 183 chr17 62539334 62539738 -22898742 - L1M4 LINE L1 -1060 5584 5165 2294 87 7 0 chr17 62539738 62540053 -22898427 + AluSp SINE Alu 1 317 0 3098 171 141 183 chr17 62540053 62540315 -22898165 - L1M4 LINE L1 -1479 5165 4894 300 53 0 0 chr17 62540315 62540353 -22898127 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 3098 171 141 183 chr17 62540353 62540368 -22898112 - L1M4 LINE L1 -1750 4894 4880 758 181 15 0 chr17 62540368 62540501 -22897979 - FRAM SINE Alu -43 133 1 3098 171 141 183 chr17 62540501 62540544 -22897936 - L1M4 LINE L1 -1764 4880 4837 765 141 0 31 chr17 62540544 62540672 -22897808 - FLAM_C SINE Alu -19 124 1 3098 171 141 183 chr17 62540672 62541516 -22896964 - L1M4 LINE L1 -1807 4837 3830 703 255 42 14 chr17 62541594 62541970 -22896510 - L1M4 LINE L1 -3826 2818 2427 1051 151 27 0 chr17 62541977 62542163 -22896317 - L1MD1 LINE L1 -92 6150 5960 * 1254 274 80 54 chr17 62542160 62542393 -22896087 - L1M4 LINE L1 -5375 1167 942 351 0 0 0 chr17 62542393 62542432 -22896048 + (TG)n Simple_repeat Simple_repeat 2 40 0 1254 274 80 54 chr17 62542432 62542982 -22895498 - L1M4 LINE L1 -5600 942 363 827 267 30 53 chr17 62544102 62544364 -22894116 - MIR SINE MIR -5 257 2 225 264 111 0 chr17 62545386 62545458 -22893022 - MIR SINE MIR -65 197 118 11168 76 11 0 chr17 62547889 62549390 -22889090 - L1PA7 LINE L1 -1064 5082 3566 6894 47 25 11 chr17 62549390 62549726 -22888754 + L1PA7 LINE L1 5088 5418 -736 2283 103 7 0 chr17 62549726 62550028 -22888452 + AluY SINE Alu 1 304 -7 6894 47 25 11 chr17 62550028 62550743 -22887737 + L1PA7 LINE L1 5418 6151 -3 2181 111 7 0 chr17 62551001 62551290 -22887190 - AluSx SINE Alu -21 291 1 2083 99 0 28 chr17 62551591 62551875 -22886605 + AluSx SINE Alu 1 276 -36 214 257 184 18 chr17 62551924 62552033 -22886447 + L2 LINE L2 3164 3290 -23 218 327 99 58 chr17 62552135 62552280 -22886200 - L2 LINE L2 -214 3058 2920 1318 219 57 0 chr17 62552280 62552441 -22886039 - AluJo SINE Alu -17 295 110 294 29 0 0 chr17 62552441 62552476 -22886004 + (TG)n Simple_repeat Simple_repeat 2 36 0 1318 219 57 0 chr17 62552476 62552593 -22885887 - AluJo SINE Alu -202 110 1 218 327 99 58 chr17 62552593 62552730 -22885750 - L2 LINE L2 -352 2920 2765 265 325 2 40 chr17 62552966 62553065 -22885415 + MIR SINE MIR 17 102 -106 308 278 53 53 chr17 62553381 62553514 -22884966 + MIR SINE MIR 79 211 -51 1612 134 0 65 chr17 62553701 62553765 -22884715 + AluSx SINE Alu 1 68 -244 2135 84 84 0 chr17 62553765 62554049 -22884431 - AluSq SINE Alu -5 308 1 1612 134 0 65 chr17 62554049 62554260 -22884220 + AluSx SINE Alu 68 258 -54 459 73 0 0 chr17 62554263 62554331 -22884149 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 341 378 83 16 chr17 62554478 62554671 -22883809 + L2 LINE L2 3067 3272 0 220 309 60 77 chr17 62554699 62554867 -22883613 - L2 LINE L2 -93 3179 3015 204 235 0 118 chr17 62555242 62555310 -22883170 - L2 LINE L2 -58 3255 3196 2081 120 7 13 chr17 62555459 62555758 -22882722 - AluSx SINE Alu -15 297 1 210 288 8 76 chr17 62555924 62556056 -22882424 - MIR SINE MIR -50 212 90 415 186 93 0 chr17 62556154 62556240 -22882240 - MIR SINE MIR -110 152 59 644 155 7 108 chr17 62556339 62556487 -22881993 - FLAM_A SINE Alu 0 133 1 25002 97 21 11 chr17 62556772 62560426 -22878054 + L1PA6 LINE L1 3 3694 -2452 7168 50 10 0 chr17 62560445 62561691 -22876789 + L1PA6 LINE L1 4896 6150 -4 21 0 0 0 chr17 62561691 62561712 -22876768 + AT_rich Low_complexity Low_complexity 1 21 0 244 220 0 17 chr17 62563447 62563506 -22874974 - MIR SINE MIR -25 237 180 396 313 114 47 chr17 62563605 62563781 -22874699 - MARNA DNA Mariner -97 489 326 1961 128 7 29 chr17 62563781 62564087 -22874393 + AluSx SINE Alu 1 299 -13 396 313 114 47 chr17 62564087 62564197 -22874283 - MARNA DNA Mariner -260 326 225 2711 26 0 0 chr17 62564197 62564499 -22873981 - AluY SINE Alu -9 302 1 396 313 114 47 chr17 62564499 62564572 -22873908 - MARNA DNA Mariner -361 225 105 2337 112 50 3 chr17 62564593 62564951 -22873529 - THE1C LTR MaLR 0 375 1 509 330 37 11 chr17 62565077 62565268 -22873212 - MIR3 SINE MIR -11 197 2 2079 113 3 3 chr17 62566571 62566862 -22871618 + AluSg SINE Alu 1 291 -19 431 335 41 3 chr17 62568227 62568383 -22870097 - MIR3 SINE MIR -46 162 2 1717 123 4 8 chr17 62568478 62568729 -22869751 - AluSq SINE Alu -17 296 47 889 199 17 85 chr17 62568773 62569009 -22869471 - MER58A DNA MER1_type 0 224 5 25 31 0 0 chr17 62569020 62569052 -22869428 + AT_rich Low_complexity Low_complexity 1 32 0 316 244 15 107 chr17 62569289 62569420 -22869060 - MIR SINE MIR -143 119 1 27 29 0 0 chr17 62570434 62570468 -22868012 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr17 62570693 62570721 -22867759 + AT_rich Low_complexity Low_complexity 1 28 0 920 200 6 0 chr17 62570814 62570984 -22867496 + FRAM SINE Alu 1 171 -5 23 33 0 0 chr17 62571319 62571349 -22867131 + AT_rich Low_complexity Low_complexity 1 30 0 2148 232 87 120 chr17 62571474 62571912 -22866568 + L1MB1 LINE L1 156 607 -5365 1849 159 3 23 chr17 62571912 62572214 -22866266 + AluJb SINE Alu 1 296 -16 2148 232 87 120 chr17 62572214 62572777 -22865703 + L1MB1 LINE L1 607 1187 -4785 1963 100 8 0 chr17 62572777 62573036 -22865444 - AluSx SINE Alu -23 289 29 2148 232 87 120 chr17 62573036 62573449 -22865031 + L1MB1 LINE L1 1187 1251 -4721 1765 170 21 3 chr17 62573449 62573738 -22864742 + AluJb SINE Alu 1 294 -18 2148 232 87 120 chr17 62573738 62574320 -22864160 + L1MB1 LINE L1 1251 1851 -4121 2930 172 102 56 chr17 62574323 62574659 -22863821 + L1MB1 LINE L1 3870 4189 -1781 2461 48 0 7 chr17 62574659 62574969 -22863511 + L1PA5 LINE L1 5847 6154 0 2930 172 102 56 chr17 62574969 62575187 -22863293 + L1MB1 LINE L1 4189 4396 -1574 2277 98 0 0 chr17 62575187 62575474 -22863006 - AluSg SINE Alu -23 287 1 2930 172 102 56 chr17 62575474 62575701 -22862779 + L1MB1 LINE L1 4396 4688 -1282 740 180 0 0 chr17 62575717 62575845 -22862635 + MSTB1 LTR MaLR 1 128 -298 * 775 175 8 0 chr17 62575840 62575966 -22862514 + MSTB1 LTR MaLR 275 401 -31 4423 161 31 38 chr17 62575966 62577102 -22861378 + L1MB1 LINE L1 4904 5992 0 765 208 99 14 chr17 62577564 62577785 -22860695 - L1M4 LINE L1 -2160 3986 3747 23 54 0 0 chr17 62577797 62577834 -22860646 + AT_rich Low_complexity Low_complexity 1 37 0 10098 208 73 50 chr17 62577837 62580300 -22858180 - L1MB7 LINE L1 -54 6628 4223 940 113 0 0 chr17 62580300 62580424 -22858056 + AluSg/x SINE Alu 178 301 -11 2429 77 0 3 chr17 62580424 62580724 -22857756 + AluY SINE Alu 1 299 -12 10098 208 73 50 chr17 62580724 62580794 -22857686 - L1MB7 LINE L1 -2459 4223 4156 2122 102 58 0 chr17 62580794 62581087 -22857393 + AluSg SINE Alu 1 310 0 10098 208 73 50 chr17 62581087 62581533 -22856947 - L1MB7 LINE L1 -2526 4156 3722 2246 109 0 0 chr17 62581533 62581826 -22856654 - AluSx SINE Alu -19 293 1 10098 208 73 50 chr17 62581826 62582422 -22856058 - L1MB7 LINE L1 -2960 3722 3141 1823 169 0 10 chr17 62582422 62582717 -22855763 - AluJb SINE Alu 0 312 21 10098 208 73 50 chr17 62582717 62583340 -22855140 - L1MB7 LINE L1 -3541 3141 2534 2215 220 50 13 chr17 62583340 62583881 -22854599 + MER68 LTR ERV1 2 562 0 10098 208 73 50 chr17 62583881 62585905 -22852575 - L1MB7 LINE L1 -4148 2534 1 253 279 0 0 chr17 62585906 62585967 -22852513 - L1M4 LINE L1 -2389 3757 3697 216 0 0 0 chr17 62585967 62585991 -22852489 + (TTG)n Simple_repeat Simple_repeat 2 25 0 5475 109 28 2 chr17 62585991 62586773 -22851707 - L1PA15 LINE L1 -11 6154 5413 2101 142 10 0 chr17 62586773 62587082 -22851398 - AluSx SINE Alu 0 312 1 5475 109 28 2 chr17 62587082 62587585 -22850895 - L1PA15 LINE L1 -752 5413 4924 1446 199 8 62 chr17 62587585 62587937 -22850543 - L1P LINE L1 -999 5147 4815 2787 227 50 61 chr17 62587964 62588643 -22849837 - L1M4 LINE L1 -2453 3693 3008 3473 138 5 17 chr17 62588643 62589221 -22849259 - L1PA16 LINE L1 0 6166 5596 2787 227 50 61 chr17 62589221 62589951 -22848529 - L1M4 LINE L1 -3138 3008 2322 2733 243 198 28 chr17 62590140 62591480 -22847000 - HAL1 LINE L1 0 2507 940 590 194 103 61 chr17 62591480 62591570 -22846910 + MER58C DNA MER1_type 3 88 -2332 2041 71 0 0 chr17 62591570 62591809 -22846671 - AluSx SINE Alu -15 297 59 590 194 103 61 chr17 62591809 62591883 -22846597 + MER58C DNA MER1_type 88 174 -41 1209 208 72 4 chr17 62591886 62592136 -22846344 + Tigger7 DNA MER2_type 1 267 -466 598 202 0 0 chr17 62592134 62592233 -22846247 + Tigger7 DNA MER2_type 2389 2487 0 * 1106 259 133 41 chr17 62592308 62593109 -22845371 - HAL1 LINE L1 -1559 948 23 315 252 47 39 chr17 62593964 62594091 -22844389 + MIR3 SINE MIR 32 159 -49 292 297 15 0 chr17 62594645 62594743 -22843737 - MIR SINE MIR -62 146 64 267 270 60 30 chr17 62595560 62595660 -22842820 - MER81 DNA DNA -10 104 2 228 237 17 0 chr17 62595942 62596001 -22842479 + (TG)n Simple_repeat Simple_repeat 1 60 0 250 244 157 17 chr17 62597535 62597650 -22840830 + MIR SINE MIR 13 143 -119 2363 89 0 0 chr17 62598555 62598847 -22839633 + AluSq SINE Alu 1 292 -21 2439 149 137 63 chr17 62598854 62599423 -22839057 - L1MB7 LINE L1 -40 6144 5534 409 260 158 43 chr17 62599475 62599729 -22838751 + L2 LINE L2 3031 3313 0 531 248 95 71 chr17 62600280 62600647 -22837833 - MLT1K LTR MaLR -2 586 211 1814 160 0 33 chr17 62600778 62601084 -22837396 - AluJb SINE Alu -16 296 1 799 303 81 27 chr17 62601122 62601565 -22836915 - MLT1K LTR MaLR 0 588 122 2488 178 21 11 chr17 62601972 62602600 -22835880 + L1MB4 LINE L1 4853 5485 -689 552 235 0 29 chr17 62602603 62602739 -22835741 + FLAM_A SINE Alu 1 132 -1 224 230 0 27 chr17 62602745 62602819 -22835661 + GA-rich Low_complexity Low_complexity 3 74 0 1688 181 14 0 chr17 62602868 62603150 -22835330 - AluJo SINE Alu -21 291 6 3439 170 4 54 chr17 62603158 62603865 -22834615 + L1MB4 LINE L1 5508 6179 -1 1867 139 51 0 chr17 62603871 62604165 -22834315 + AluSx SINE Alu 1 309 -3 643 96 0 193 chr17 62604197 62604363 -22834117 + L1MC1 LINE L1 6184 6317 -16 1112 164 62 10 chr17 62605606 62605814 -22832666 + MER20 DNA MER1_type 1 219 0 1687 179 20 3 chr17 62606669 62606965 -22831515 + AluJo SINE Alu 1 301 -11 213 39 0 0 chr17 62606992 62607018 -22831462 + (TG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr17 62607018 62607040 -22831440 + AT_rich Low_complexity Low_complexity 1 22 0 715 97 131 62 chr17 62607040 62607185 -22831295 - AluSg/x SINE Alu 0 309 155 263 277 12 12 chr17 62607258 62607341 -22831139 + MIR SINE MIR 71 153 -109 775 168 72 66 chr17 62607375 62607542 -22830938 - AluJo SINE Alu -105 207 40 849 140 28 28 chr17 62607543 62607721 -22830759 + L1MC3 LINE L1 6920 7097 -688 301 289 11 0 chr17 62607721 62607811 -22830669 + MLT1F1 LTR MaLR 35 125 -442 2540 180 94 24 chr17 62607814 62608234 -22830246 + L1MC3 LINE L1 7195 7665 -120 2041 112 101 20 chr17 62608234 62608581 -22829899 + THE1C LTR MaLR 1 375 0 2540 180 94 24 chr17 62608581 62608711 -22829769 + L1MC3 LINE L1 7665 7784 -1 258 169 28 28 chr17 62609044 62609115 -22829365 - L1ME LINE L1 -340 5781 5711 25 31 0 0 chr17 62609284 62609316 -22829164 + AT_rich Low_complexity Low_complexity 1 32 0 4487 160 15 16 chr17 62609511 62610015 -22828465 - L1MA9 LINE L1 -38 6274 5770 2281 118 3 6 chr17 62610015 62610328 -22828152 - AluSx SINE Alu 0 312 1 4487 160 15 16 chr17 62610328 62610615 -22827865 - L1MA9 LINE L1 -542 5770 5484 2579 103 41 8 chr17 62610619 62610647 -22827833 - Tigger4(Zombi) DNA MER2_type 0 2731 2705 2425 95 3 0 chr17 62610647 62610951 -22827529 - AluSg SINE Alu -5 305 1 2579 103 41 8 chr17 62610951 62611310 -22827170 - Tigger4(Zombi) DNA MER2_type -26 2705 2331 1750 147 3 46 chr17 62611310 62611616 -22826864 - AluJb SINE Alu -19 293 1 13186 125 16 39 chr17 62611616 62612616 -22825864 - Tigger4(Zombi) DNA MER2_type -692 2039 1018 1899 109 43 36 chr17 62612616 62612919 -22825561 - AluSx SINE Alu -7 305 1 13186 125 16 39 chr17 62612919 62613311 -22825169 - Tigger4(Zombi) DNA MER2_type -1713 1018 619 1658 179 12 35 chr17 62613311 62613491 -22824989 - AluJb SINE Alu 0 312 141 2145 139 0 0 chr17 62613491 62613801 -22824679 - AluSx SINE Alu -2 310 1 1658 179 12 35 chr17 62613801 62613939 -22824541 - AluJb SINE Alu -171 141 1 13186 125 16 39 chr17 62613939 62614631 -22823849 - Tigger4(Zombi) DNA MER2_type -2112 619 1 7014 167 22 29 chr17 62614631 62616423 -22822057 - L1M2 LINE L1 -749 5461 3801 1912 244 64 41 chr17 62616427 62617657 -22820823 - L1M2 LINE L1 -3542 2668 1405 4016 211 124 57 chr17 62617672 62618913 -22819567 - L1M2 LINE L1 -4632 1509 186 1092 163 0 0 chr17 62618913 62619085 -22819395 - AluSq SINE Alu -8 305 134 2349 78 7 3 chr17 62619085 62619378 -22819102 - AluSx SINE Alu -11 301 8 460 277 38 38 chr17 62619419 62619603 -22818877 - L1M2 LINE L1 -5957 184 1 390 200 0 12 chr17 62619813 62619898 -22818582 - MIR SINE MIR -96 166 83 369 254 0 74 chr17 62620081 62620203 -22818277 + MIR SINE MIR 69 181 -81 255 334 179 3 chr17 62620818 62621147 -22817333 + L2 LINE L2 1868 2254 -1060 2182 122 0 0 chr17 62621962 62622248 -22816232 + AluSx SINE Alu 1 286 -26 563 39 13 0 chr17 62622248 62622326 -22816154 + (CATAA)n Simple_repeat Simple_repeat 2 80 0 180 0 0 0 chr17 62622331 62622351 -22816129 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 418 317 77 82 chr17 62622490 62622869 -22815611 + L2 LINE L2 2877 3253 -19 361 351 64 26 chr17 62623027 62623292 -22815188 + L3b LINE CR1 1276 1550 -33 761 121 23 61 chr17 62625637 62625649 -22812831 - FLAM_C SINE Alu -179 133 122 2077 138 3 0 chr17 62625649 62625953 -22812527 - AluSx SINE Alu -5 307 3 761 121 23 61 chr17 62625953 62626072 -22812408 - FLAM_C SINE Alu -190 122 7 776 246 73 17 chr17 62626642 62626874 -22811606 + MIR SINE MIR 18 262 0 264 250 14 0 chr17 62626907 62626979 -22811501 - MIR SINE MIR -71 191 119 681 101 67 42 chr17 62628140 62628259 -22810221 + FRAM SINE Alu 47 168 -8 439 281 134 58 chr17 62628298 62628666 -22809814 - MLT1J LTR MaLR -18 597 110 547 119 12 0 chr17 62628707 62628791 -22809689 - FRAM/FAM SINE Alu -92 84 1 288 236 14 14 chr17 62628793 62628865 -22809615 - MER5B DNA MER1_type -66 112 41 2110 141 0 0 chr17 62629354 62629659 -22808821 - AluSx SINE Alu -7 305 1 341 221 191 0 chr17 62629982 62630113 -22808367 - MIR SINE MIR -60 202 47 697 225 30 18 chr17 62630303 62630472 -22808008 - MER104 DNA Tc2 -5 175 5 280 294 201 39 chr17 62638855 62639059 -22799421 + MIR SINE MIR 18 254 -8 237 275 88 13 chr17 62639433 62639583 -22798897 + MIR SINE MIR 1 164 -83 671 245 19 42 chr17 62641878 62642094 -22796386 - L1ME3A LINE L1 0 6170 5960 199 145 12 48 chr17 62642780 62642863 -22795617 + GA-rich Low_complexity Low_complexity 6 85 0 570 211 82 35 chr17 62645271 62645442 -22793038 - MIR SINE MIR -76 186 8 205 231 176 19 chr17 62645876 62645984 -22792496 - MIR3 SINE MIR -3 205 81 1645 171 27 14 chr17 62647171 62647464 -22791016 + AluJo SINE Alu 3 299 -13 515 289 108 16 chr17 62648117 62648311 -22790169 + MIR SINE MIR 50 261 -1 219 337 23 0 chr17 62651495 62651581 -22786899 + L2 LINE L2 2956 3043 -229 1499 250 142 36 chr17 62651796 62652016 -22786464 - L1MC4a LINE L1 -1776 6032 5837 2110 112 3 56 chr17 62652016 62652338 -22786142 - AluSq SINE Alu -8 305 1 1499 250 142 36 chr17 62652338 62652814 -22785666 - L1MC4a LINE L1 -1971 5837 5262 273 288 44 25 chr17 62652993 62653153 -22785327 - L1MC4a LINE L1 -1098 5048 4886 238 279 68 7 chr17 62653276 62653423 -22785057 - L1MC4a LINE L1 -1438 4708 4553 601 282 49 41 chr17 62653919 62654164 -22784316 + MIR SINE MIR 16 262 0 488 287 0 30 chr17 62654649 62654816 -22783664 + MIR3 SINE MIR 41 202 -6 253 320 19 10 chr17 62655215 62655318 -22783162 - MIR3 SINE MIR -14 194 91 205 275 240 31 chr17 62655709 62655967 -22782513 - L2 LINE L2 -567 2747 2436 248 270 230 0 chr17 62656225 62656351 -22782129 - MIR3 SINE MIR -24 184 30 187 294 167 54 chr17 62656482 62656686 -22781794 - L2 LINE L2 -127 3145 2919 2317 125 0 0 chr17 62657954 62658267 -22780213 + AluSq SINE Alu 1 313 0 390 214 20 20 chr17 62658456 62658554 -22779926 - MIR SINE MIR -97 165 68 180 336 88 22 chr17 62659693 62659830 -22778650 - L2 LINE L2 -568 2746 2601 213 135 39 39 chr17 62660079 62660131 -22778349 - MIR SINE MIR -97 165 114 1553 176 103 0 chr17 62661434 62661736 -22776744 + MER58B DNA MER1_type 1 333 -8 2296 126 0 0 chr17 62662052 62662362 -22776118 - AluSx SINE Alu -2 310 1 360 0 0 0 chr17 62663909 62663949 -22774531 + (TG)n Simple_repeat Simple_repeat 2 41 0 217 93 47 0 chr17 62665025 62665068 -22773412 + (TA)n Simple_repeat Simple_repeat 2 46 0 267 54 0 0 chr17 62665231 62665268 -22773212 + (TA)n Simple_repeat Simple_repeat 2 38 0 633 251 274 19 chr17 62668818 62669248 -22769232 + L1ME4a LINE L1 5381 5920 -201 262 206 29 15 chr17 62669463 62669531 -22768949 + (TATG)n Simple_repeat Simple_repeat 2 70 0 24 32 0 0 chr17 62669630 62669661 -22768819 + AT_rich Low_complexity Low_complexity 1 31 0 322 349 139 6 chr17 62669788 62670278 -22768202 + L2 LINE L2 2014 2568 -746 405 0 0 0 chr17 62671506 62671551 -22766929 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1974 112 0 22 chr17 62671563 62671839 -22766641 - AluSx SINE Alu -39 273 4 1752 137 4 0 chr17 62671919 62672168 -22766312 + AluSx SINE Alu 47 296 -16 407 237 86 117 chr17 62672302 62672559 -22765921 + MIR SINE MIR 8 256 -6 487 269 69 33 chr17 62672713 62672938 -22765542 - MIR SINE MIR -37 225 4 2151 131 0 0 chr17 62674247 62674544 -22763936 - AluSx SINE Alu -15 297 1 255 327 37 19 chr17 62674773 62674880 -22763600 + MIR SINE MIR 101 209 -53 252 312 34 2 chr17 62675336 62675433 -22763047 + MIR SINE MIR 57 147 -61 212 200 20 20 chr17 62676261 62676311 -22762169 + CT-rich Low_complexity Low_complexity 1 50 0 234 256 52 126 chr17 62677995 62678147 -22760333 + MIR SINE MIR 49 180 -82 2526 93 0 0 chr17 62678147 62678457 -22760023 + AluSx SINE Alu 1 310 -2 234 256 52 126 chr17 62678457 62678534 -22759946 + MIR SINE MIR 180 261 -1 260 231 50 110 chr17 62679220 62679519 -22758961 - L1MEd LINE L1 -5173 946 666 292 263 237 0 chr17 62679528 62679646 -22758834 - L1MEd LINE L1 -5488 631 486 2069 134 6 13 chr17 62679677 62679990 -22758490 - AluSx SINE Alu -1 311 1 2753 248 79 27 chr17 62680095 62681469 -22757011 + L1ME3A LINE L1 4698 6160 -10 1702 194 3 10 chr17 62681507 62681811 -22756669 + AluJo SINE Alu 3 304 -8 549 274 13 7 chr17 62681926 62682079 -22756401 - L1MEd LINE L1 -5963 156 3 402 179 13 0 chr17 62682082 62682160 -22756320 + L1M3 LINE L1 5382 5460 -708 6420 126 62 21 chr17 62683114 62683557 -22754923 - Tigger3b DNA MER2_type -1798 1230 807 2073 137 0 0 chr17 62683557 62683850 -22754630 - AluJb SINE Alu -19 293 1 6420 126 62 21 chr17 62683850 62684569 -22753911 - Tigger3b DNA MER2_type -2221 807 20 314 280 94 69 chr17 62684616 62684891 -22753589 - L1MDb LINE L1 -5060 1349 1068 355 316 88 14 chr17 62684945 62685055 -22753425 + L2 LINE L2 2260 2360 -954 261 0 0 0 chr17 62685055 62685084 -22753396 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 355 316 88 14 chr17 62685084 62685188 -22753292 + L2 LINE L2 2360 2490 -824 2931 6 0 0 chr17 62685633 62685951 -22752529 + AluYb8 SINE Alu 1 318 0 1012 62 21 0 chr17 62685989 62686133 -22752347 + (TTTC)n Simple_repeat Simple_repeat 4 150 0 1070 166 0 0 chr17 62686666 62686829 -22751651 + FRAM SINE Alu 1 163 -3 208 193 35 0 chr17 62687415 62687472 -22751008 + (TG)n Simple_repeat Simple_repeat 1 59 0 243 266 164 8 chr17 62687881 62688009 -22750471 - MIR SINE MIR -10 252 105 1065 253 108 62 chr17 62688419 62688576 -22749904 + L1ME3A LINE L1 5159 5307 -863 868 209 12 0 chr17 62688576 62688739 -22749741 + FAM SINE Alu 4 168 -7 1065 253 108 62 chr17 62688739 62688763 -22749717 + L1ME3A LINE L1 5307 5328 -842 1966 106 78 36 chr17 62688763 62689123 -22749357 - THE1C LTR MaLR 0 375 1 1065 253 108 62 chr17 62689123 62689635 -22748845 + L1ME3A LINE L1 5328 5912 -258 2235 101 3 13 chr17 62689635 62689941 -22748539 - AluSx SINE Alu -9 303 1 1065 253 108 62 chr17 62689941 62689969 -22748511 + L1ME3A LINE L1 5912 5937 -233 188 264 79 107 chr17 62691251 62691429 -22747051 - MIR SINE MIR -57 205 33 280 193 10 66 chr17 62692438 62692527 -22745953 + MIR SINE MIR 18 110 -152 2028 127 0 28 chr17 62692527 62692869 -22745611 + AluSx SINE Alu 1 334 0 280 193 10 66 chr17 62692869 62692887 -22745593 + MIR SINE MIR 110 209 -53 448 266 133 23 chr17 62693054 62693227 -22745253 - MIR SINE MIR -51 211 20 2178 124 0 13 chr17 62693305 62693611 -22744869 + AluSx SINE Alu 1 302 -10 2267 105 0 29 chr17 62693772 62694086 -22744394 - AluSq SINE Alu -8 305 1 2351 51 20 3 chr17 62694290 62694583 -22743897 + AluY SINE Alu 1 298 -13 213 250 0 0 chr17 62694755 62694803 -22743677 + A-rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr17 62695245 62695268 -22743212 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr17 62695295 62695323 -22743157 + AT_rich Low_complexity Low_complexity 1 28 0 2185 84 3 40 chr17 62695376 62695699 -22742781 + AluSx SINE Alu 1 311 -1 2369 107 0 0 chr17 62695959 62696268 -22742212 - AluSx SINE Alu -3 309 1 721 329 46 4 chr17 62696489 62696726 -22741754 - MIR SINE MIR -14 248 2 2037 144 0 22 chr17 62696998 62697317 -22741163 + AluJb SINE Alu 1 312 0 203 229 0 0 chr17 62697400 62697435 -22741045 - L2 LINE L2 -27 3245 3211 589 272 43 11 chr17 62697552 62697736 -22740744 - MIR SINE MIR -71 191 2 263 305 67 38 chr17 62699374 62699479 -22739001 + L2 LINE L2 3155 3262 -10 3215 169 94 39 chr17 62699891 62700709 -22737771 - L1MB8 LINE L1 -1 6177 5296 2368 89 0 19 chr17 62700709 62701022 -22737458 - AluSg SINE Alu -3 307 1 3215 169 94 39 chr17 62701022 62701118 -22737362 - L1MB8 LINE L1 -882 5296 5207 1840 203 74 23 chr17 62701314 62701745 -22736735 - L1MB8 LINE L1 -1368 4778 4310 1714 166 35 3 chr17 62701745 62702028 -22736452 + AluSx SINE Alu 1 292 -20 1840 203 74 23 chr17 62702028 62702163 -22736317 - L1MB8 LINE L1 -1836 4310 4183 * 2549 211 51 44 chr17 62702157 62702824 -22735656 - L1MB8 LINE L1 -2527 3619 2943 2061 90 45 55 chr17 62702824 62703134 -22735346 - AluSg SINE Alu -3 307 1 2549 211 51 44 chr17 62703134 62703367 -22735113 - L1MB8 LINE L1 -3203 2943 2713 407 302 8 32 chr17 62703466 62703592 -22734888 + MIR3 SINE MIR 49 171 -37 * 419 259 143 60 chr17 62703581 62703622 -22734858 + MIR SINE MIR 29 65 -197 2204 91 7 26 chr17 62703622 62703929 -22734551 + AluSx SINE Alu 1 301 -11 419 259 143 60 chr17 62703929 62704103 -22734377 + MIR SINE MIR 65 262 0 2775 147 43 6 chr17 62704666 62705135 -22733345 + MER66B LTR ERV1 1 486 0 194 255 0 20 chr17 62706659 62706710 -22731770 - MIR3 SINE MIR -5 203 154 204 253 74 63 chr17 62706959 62707054 -22731426 - MIR3 SINE MIR -10 198 103 627 167 260 0 chr17 62707055 62707205 -22731275 - MER53 DNA DNA 0 189 1 4712 174 68 85 chr17 62707480 62707865 -22730615 - Charlie1a DNA MER1_type -1308 1453 1063 2123 119 26 26 chr17 62707865 62708175 -22730305 + AluSg SINE Alu 1 310 0 4712 174 68 85 chr17 62708175 62709000 -22729480 - Charlie1a DNA MER1_type -1698 1063 269 1865 107 55 24 chr17 62709000 62709290 -22729190 - AluSg SINE Alu -11 299 1 4712 174 68 85 chr17 62709290 62709555 -22728925 - Charlie1a DNA MER1_type -2492 269 1 186 325 0 0 chr17 62709926 62709966 -22728514 - L2 LINE L2 -23 3290 3251 1842 142 0 36 chr17 62710502 62710669 -22727811 - AluJb SINE Alu -19 293 140 2617 62 0 0 chr17 62710669 62710977 -22727503 - AluY SINE Alu -3 308 1 1842 142 0 36 chr17 62710977 62711112 -22727368 - AluJb SINE Alu -172 140 2 521 311 66 13 chr17 62711163 62711905 -22726575 + L1ME4a LINE L1 5100 5884 -286 649 299 49 0 chr17 62713988 62714192 -22724288 - MIR SINE MIR 0 262 49 650 278 67 35 chr17 62715487 62715858 -22722622 + L1ME LINE L1 5391 5773 -348 2546 63 0 0 chr17 62716053 62716354 -22722126 - AluY SINE Alu -10 301 1 2035 101 27 24 chr17 62716356 62716678 -22721802 - AluSx SINE Alu 0 312 1 1237 176 14 108 chr17 62716749 62717101 -22721379 - MER47B DNA MER2_type -99 319 1 417 162 120 17 chr17 62717101 62717218 -22721262 + L1ME4a LINE L1 5985 6113 -8 347 269 8 17 chr17 62717529 62717648 -22720832 - L1MC/D LINE L1 -2058 5750 5633 1619 174 10 3 chr17 62717701 62718012 -22720468 - L1MC1 LINE L1 -113 6220 5908 2037 142 3 23 chr17 62718018 62718370 -22720110 + Tigger1 DNA MER2_type 24 368 -2050 * 3878 108 40 37 chr17 62718368 62718433 -22720047 + Tigger1 DNA MER2_type 581 644 -1774 2081 72 0 33 chr17 62718433 62718709 -22719771 + AluSx SINE Alu 40 306 -6 3878 108 40 37 chr17 62718709 62719174 -22719306 + Tigger1 DNA MER2_type 644 1116 -1302 2336 83 10 0 chr17 62719174 62719474 -22719006 - AluSx SINE Alu -9 303 1 3878 108 40 37 chr17 62719474 62719618 -22718862 + Tigger1 DNA MER2_type 1116 1258 -1160 2225 96 14 0 chr17 62719618 62719911 -22718569 - AluSq SINE Alu -15 298 2 5761 149 26 18 chr17 62719916 62721674 -22716806 - L1PA16 LINE L1 0 6166 4392 315 71 0 0 chr17 62721674 62721716 -22716764 + (TG)n Simple_repeat Simple_repeat 2 43 0 5761 149 26 18 chr17 62721716 62721784 -22716696 - L1PA16 LINE L1 -1774 4392 4326 2481 129 21 2 chr17 62721791 62722211 -22716269 + Tigger1 DNA MER2_type 1238 1665 -753 1354 147 4 40 chr17 62722204 62722252 -22716228 + Tigger1 DNA MER2_type 2176 2224 -194 * 1678 131 106 11 chr17 62722252 62722526 -22715954 - AluSx SINE Alu -12 300 1 1354 147 4 40 chr17 62722526 62722728 -22715752 + Tigger1 DNA MER2_type 2224 2417 -1 8360 203 56 22 chr17 62722728 62723314 -22715166 - L1MC1 LINE L1 -423 5910 5345 2249 125 0 0 chr17 62723314 62723611 -22714869 + AluSq SINE Alu 1 297 -16 8360 203 56 22 chr17 62723611 62723833 -22714647 - L1MC1 LINE L1 -988 5345 5132 2295 71 0 0 chr17 62723833 62724127 -22714353 - AluY SINE Alu -17 294 1 1521 145 0 56 chr17 62724129 62724398 -22714082 - AluJb SINE Alu -16 296 43 8360 203 56 22 chr17 62724398 62726627 -22711853 - L1MC1 LINE L1 -1201 5132 2759 772 251 47 19 chr17 62726626 62726988 -22711492 - L1M4 LINE L1 -1375 4771 4400 * 378 264 158 53 chr17 62727106 62727575 -22710905 - L1M4 LINE L1 -1932 4214 3697 568 298 81 39 chr17 62727856 62728947 -22709533 - L1M4 LINE L1 -2863 3283 2147 207 307 0 0 chr17 62728989 62729077 -22709403 + T-rich Low_complexity Low_complexity 1 88 0 423 361 30 34 chr17 62729411 62729677 -22708803 - HAL1 LINE L1 -792 1715 1451 317 192 133 42 chr17 62729691 62729811 -22708669 - HAL1 LINE L1 -1143 1364 1234 310 239 0 0 chr17 62730054 62730125 -22708355 - L2 LINE L2 -1 3312 3242 1041 169 10 15 chr17 62730161 62730362 -22708118 - MER20 DNA MER1_type 0 219 20 342 356 76 70 chr17 62730370 62731121 -22707359 - L2 LINE L2 -85 3187 2414 271 167 42 21 chr17 62731949 62732045 -22706435 + CT-rich Low_complexity Low_complexity 2 99 0 2408 92 0 3 chr17 62732070 62732376 -22706104 - AluSc SINE Alu -4 305 1 2194 94 11 0 chr17 62732376 62732663 -22705817 - AluSc SINE Alu -3 306 17 2372 66 10 7 chr17 62732759 62733062 -22705418 - AluY SINE Alu -7 304 1 360 288 110 52 chr17 62733177 62733368 -22705112 + MIR SINE MIR 45 246 -16 2367 100 0 3 chr17 62733945 62734255 -22704225 + AluSx SINE Alu 1 309 -3 246 32 0 0 chr17 62734804 62734835 -22703645 + (TG)n Simple_repeat Simple_repeat 2 32 0 243 0 0 0 chr17 62734861 62734888 -22703592 + (TG)n Simple_repeat Simple_repeat 2 28 0 1893 141 0 11 chr17 62734888 62735171 -22703309 - AluSx SINE Alu -28 284 5 21 0 0 0 chr17 62736190 62736211 -22702269 + AT_rich Low_complexity Low_complexity 1 21 0 35 24 0 0 chr17 62736555 62736597 -22701883 + AT_rich Low_complexity Low_complexity 1 42 0 457 143 0 0 chr17 62737746 62737809 -22700671 + Alu SINE Alu 231 293 -18 2123 124 0 13 chr17 62737811 62738118 -22700362 + AluSx SINE Alu 1 303 -9 392 278 60 26 chr17 62738285 62738436 -22700044 + MIR3 SINE MIR 45 200 -8 2714 33 0 0 chr17 62738935 62739239 -22699241 + AluY SINE Alu 1 304 -7 359 232 0 12 chr17 62739310 62739392 -22699088 + MIR3 SINE MIR 120 200 -8 1902 155 0 7 chr17 62739525 62739821 -22698659 - AluJb SINE Alu -18 294 1 1990 132 0 25 chr17 62740242 62740561 -22697919 - AluJb SINE Alu 0 312 2 214 371 48 19 chr17 62740769 62740874 -22697606 - L2 LINE L2 -212 3060 2953 2447 66 0 0 chr17 62740999 62741301 -22697179 + AluY SINE Alu 1 302 -9 276 30 0 0 chr17 62742738 62742771 -22695709 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1580 190 7 3 chr17 62742809 62743093 -22695387 - AluJo SINE Alu -27 285 1 2230 92 0 0 chr17 62743198 62743506 -22694974 - AluSg SINE Alu 0 308 1 2371 136 64 141 chr17 62743549 62744239 -22694241 - L1MC2 LINE L1 -39 6305 5669 2292 104 3 19 chr17 62744311 62744627 -22693853 + AluSx SINE Alu 1 311 -1 2342 72 0 7 chr17 62744830 62745121 -22693359 - AluSq SINE Alu -22 291 3 360 309 73 77 chr17 62745149 62745610 -22692870 - L2 LINE L2 -233 3039 2556 2646 94 0 0 chr17 62745710 62746049 -22692431 + L1PA8 LINE L1 5829 6167 -5 252 271 93 9 chr17 62746220 62746327 -22692153 + L2 LINE L2 3197 3312 -1 7362 27 0 0 chr17 62746347 62747152 -22691328 + L1PA4 LINE L1 5348 6152 -3 740 129 0 52 chr17 62748493 62748609 -22689871 + FLAM_A SINE Alu 18 127 -15 451 234 66 15 chr17 62749128 62749265 -22689215 - MIR SINE MIR -10 252 109 6304 108 37 90 chr17 62750826 62751509 -22686971 + Tigger1 DNA MER2_type 2 687 -1731 593 145 0 0 chr17 62751509 62751592 -22686888 - AluJ/FLAM SINE Alu -228 84 2 6304 108 37 90 chr17 62751592 62751968 -22686512 + Tigger1 DNA MER2_type 687 1082 -1336 2235 107 0 0 chr17 62752257 62752547 -22685933 + AluSx SINE Alu 1 290 -22 297 0 0 0 chr17 62752557 62752590 -22685890 + (CA)n Simple_repeat Simple_repeat 2 34 0 4993 109 44 19 chr17 62752754 62753379 -22685101 - L1PA16 LINE L1 -3 6163 5472 907 144 0 43 chr17 62753379 62753518 -22684962 - FLAM_C SINE Alu 0 133 1 4993 109 44 19 chr17 62753518 62753824 -22684656 - L1PA16 LINE L1 -694 5472 5175 220 272 98 0 chr17 62753831 62753923 -22684557 - MIR SINE MIR -113 149 49 1703 171 26 26 chr17 62754002 62754312 -22684168 + AluJo SINE Alu 1 310 -2 2218 105 16 0 chr17 62754339 62754645 -22683835 + AluY SINE Alu 1 311 0 321 299 45 51 chr17 62755993 62756150 -22682330 + MIR3 SINE MIR 29 184 -24 189 0 0 0 chr17 62757198 62757219 -22681261 + (A)n Simple_repeat Simple_repeat 1 21 0 2110 110 4 0 chr17 62757290 62757601 -22680879 - AluSx SINE Alu 0 312 1 216 184 0 0 chr17 62757614 62757652 -22680828 - MIR SINE MIR -43 219 182 224 265 0 0 chr17 62758115 62758164 -22680316 + A-rich Low_complexity Low_complexity 1 49 0 2303 85 0 3 chr17 62758741 62759034 -22679446 - AluY SINE Alu -19 292 1 180 273 36 0 chr17 62759039 62759094 -22679386 - MIR SINE MIR -10 252 196 183 349 53 30 chr17 62759185 62759317 -22679163 - L2 LINE L2 -221 3051 2917 2408 130 13 145 chr17 62759512 62760065 -22678415 + LTR12 LTR ERV1 1 480 -234 338 345 35 0 chr17 62760102 62760215 -22678265 - MIR SINE MIR -133 129 13 1227 130 6 0 chr17 62760461 62760638 -22677842 - AluSq SINE Alu -7 306 129 2365 82 7 0 chr17 62760642 62760933 -22677547 - AluSq SINE Alu -18 295 3 195 42 0 0 chr17 62762519 62762543 -22675937 + (CAG)n Simple_repeat Simple_repeat 1 24 0 418 322 194 5 chr17 62762550 62762761 -22675719 - MIR SINE MIR -6 256 6 2175 107 13 10 chr17 62762783 62763083 -22675397 + AluSx SINE Alu 1 301 -11 2178 69 0 28 chr17 62763850 62764139 -22674341 + AluY SINE Alu 7 287 -24 2343 103 3 0 chr17 62764409 62764709 -22673771 + AluSp SINE Alu 1 301 -12 434 140 35 123 chr17 62765279 62765324 -22673156 - L1MA10 LINE L1 -7 6327 6280 2317 74 0 27 chr17 62765324 62765620 -22672860 - AluSc SINE Alu -17 292 5 434 140 35 123 chr17 62765620 62765688 -22672792 - L1MA10 LINE L1 -54 6280 6224 1491 140 0 42 chr17 62765709 62765973 -22672507 - L1MA10 LINE L1 -477 5835 5583 1225 188 0 25 chr17 62766231 62766470 -22672010 - AluJo SINE Alu -43 269 37 386 248 106 25 chr17 62766542 62766740 -22671740 - L1ME4a LINE L1 -1 6120 5907 2457 82 0 0 chr17 62766996 62767300 -22671180 + AluY SINE Alu 1 304 -7 2711 94 13 8 chr17 62767413 62767786 -22670694 - THE1C LTR MaLR 0 375 1 866 168 8 0 chr17 62767797 62767928 -22670552 - FLAM_A SINE Alu -1 132 1 271 294 54 22 chr17 62768384 62768476 -22670004 - MIR SINE MIR -81 127 33 1845 154 37 0 chr17 62768613 62768912 -22669568 + AluJb SINE Alu 1 310 -2 402 21 0 0 chr17 62769207 62769254 -22669226 + (TG)n Simple_repeat Simple_repeat 1 47 0 2402 89 0 3 chr17 62771418 62771731 -22666749 + AluSq SINE Alu 1 312 -1 356 272 95 41 chr17 62773116 62773285 -22665195 + MIR3 SINE MIR 24 201 -7 2381 82 3 3 chr17 62773702 62774008 -22664472 + AluSq SINE Alu 1 306 -7 190 349 61 15 chr17 62775066 62775132 -22663348 - L3b LINE CR1 -10 1573 1505 2146 105 17 3 chr17 62775296 62775590 -22662890 - AluSx SINE Alu -14 298 1 244 209 0 90 chr17 62775617 62775684 -22662796 + MIR SINE MIR 100 160 -102 679 60 0 0 chr17 62775686 62775769 -22662711 + AluS SINE Alu 2 84 -229 283 282 87 10 chr17 62775783 62775886 -22662594 + MIR SINE MIR 149 259 -3 320 250 0 111 chr17 62776210 62776318 -22662162 - MIR3 SINE MIR -25 183 88 2380 75 0 0 chr17 62776911 62777204 -22661276 + AluSc SINE Alu 1 293 -16 279 0 0 0 chr17 62778665 62778696 -22659784 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2125 113 0 0 chr17 62778700 62779018 -22659462 - AluSx SINE Alu 0 318 1 2364 89 0 3 chr17 62779554 62779858 -22658622 + AluSg SINE Alu 1 303 -7 238 276 58 11 chr17 62780181 62780268 -22658212 + MIR SINE MIR 123 213 -49 781 200 137 31 chr17 62780788 62781017 -22657463 + MIR SINE MIR 3 254 -8 204 275 0 0 chr17 62781563 62781603 -22656877 + L2 LINE L2 3213 3252 -20 564 229 85 67 chr17 62782334 62782557 -22655923 - MIR SINE MIR -2 260 34 1039 294 90 58 chr17 62784359 62784797 -22653683 + L1MC/D LINE L1 4066 4489 -1657 2226 111 0 3 chr17 62784797 62785095 -22653385 - AluSx SINE Alu -15 297 1 1039 294 90 58 chr17 62785095 62785106 -22653374 + L1MC/D LINE L1 4489 4498 -1648 2401 90 3 0 chr17 62785106 62785406 -22653074 - AluSp SINE Alu -12 301 1 1039 294 90 58 chr17 62785406 62785493 -22652987 + L1MC/D LINE L1 4498 4581 -1565 1865 244 60 26 chr17 62785493 62785997 -22652483 - LTR33 LTR ERVL 0 521 1 1039 294 90 58 chr17 62785997 62786313 -22652167 + L1MC/D LINE L1 4581 4947 -1199 339 297 117 0 chr17 62786327 62786455 -22652025 + L1MC/D LINE L1 5456 5598 -2210 340 205 33 119 chr17 62786477 62786628 -22651852 + MIR SINE MIR 125 262 0 2086 144 3 0 chr17 62786823 62787122 -22651358 - AluSx SINE Alu -12 300 1 241 291 0 64 chr17 62787476 62787546 -22650934 + MIR SINE MIR 150 212 -50 2202 99 34 0 chr17 62787546 62787839 -22650641 + AluSp SINE Alu 1 303 -10 241 291 0 64 chr17 62787839 62787878 -22650602 + MIR SINE MIR 212 252 -10 2501 77 0 0 chr17 62789460 62789771 -22648709 - AluY SINE Alu 0 311 1 1808 122 64 10 chr17 62789870 62790165 -22648315 + AluSx SINE Alu 1 311 -1 468 188 149 0 chr17 62790819 62790973 -22647507 - L1MB2 LINE L1 0 6171 5995 1792 142 89 0 chr17 62790991 62791272 -22647208 - AluSx SINE Alu -6 306 1 3502 158 17 70 chr17 62791272 62791522 -22646958 - L1MB2 LINE L1 -263 5908 5646 2480 81 3 3 chr17 62791522 62791829 -22646651 - AluSp SINE Alu -6 307 1 3502 158 17 70 chr17 62791829 62792024 -22646456 - L1MB2 LINE L1 -525 5646 5442 186 43 0 0 chr17 62792024 62792047 -22646433 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3502 158 17 70 chr17 62792047 62792204 -22646276 - L1MB2 LINE L1 -729 5442 5278 2063 143 0 9 chr17 62792204 62792519 -22645961 - AluSx SINE Alu 0 312 1 2446 84 0 10 chr17 62792527 62792837 -22645643 - AluSx SINE Alu -5 307 1 3502 158 17 70 chr17 62792837 62793145 -22645335 - L1MB2 LINE L1 -900 5271 4948 2174 93 9 52 chr17 62793145 62793469 -22645011 - AluSp SINE Alu -1 312 3 3502 158 17 70 chr17 62793469 62793531 -22644949 - L1MB2 LINE L1 -1223 4948 4884 2434 85 3 3 chr17 62793531 62793838 -22644642 - AluSg SINE Alu -1 309 3 2016 128 38 0 chr17 62793839 62794004 -22644476 - AluSx SINE Alu -13 299 117 405 0 0 0 chr17 62794004 62794049 -22644431 + (TG)n Simple_repeat Simple_repeat 2 46 0 2016 128 38 0 chr17 62794049 62794171 -22644309 - AluSx SINE Alu -195 117 1 3502 158 17 70 chr17 62794171 62794224 -22644256 - L1MB2 LINE L1 -1287 4884 4915 1813 177 3 0 chr17 62794224 62794524 -22643956 - AluJo SINE Alu -11 301 1 3502 158 17 70 chr17 62794524 62794546 -22643934 - L1MB2 LINE L1 -1255 4916 4894 639 231 64 50 chr17 62794560 62794769 -22643711 + MER69 DNA AcHobo 2169 2385 -141 2043 131 10 22 chr17 62794769 62795081 -22643399 + AluJb SINE Alu 5 312 0 639 231 64 50 chr17 62795081 62795152 -22643328 + MER69 DNA AcHobo 2385 2453 -73 921 257 128 71 chr17 62795167 62795516 -22642964 - L1ME LINE L1 -540 1901 1573 1610 112 0 9 chr17 62795516 62795739 -22642741 - AluJb SINE Alu -6 306 86 921 257 128 71 chr17 62795739 62796376 -22642104 - L1ME LINE L1 -868 1573 974 2558 21 0 0 chr17 62796376 62796667 -22641813 - L1PA4 LINE L1 -3 6152 5862 921 257 128 71 chr17 62796667 62796696 -22641784 - L1ME LINE L1 -1467 974 948 2367 101 3 0 chr17 62796696 62797002 -22641478 - AluSx SINE Alu -5 307 1 921 257 128 71 chr17 62797002 62797038 -22641442 - L1ME LINE L1 -1493 948 734 1296 216 33 66 chr17 62797041 62797283 -22641197 + L1M4 LINE L1 4013 4239 -1907 1479 188 35 7 chr17 62797283 62797565 -22640915 - AluJo SINE Alu -22 290 1 1296 216 33 66 chr17 62797565 62797715 -22640765 + L1M4 LINE L1 4239 4392 -1754 375 246 73 68 chr17 62797738 62797929 -22640551 - MLT2F LTR ERVL -39 624 433 411 121 0 121 chr17 62797929 62798012 -22640468 - AluJ/FRAM SINE Alu -25 287 215 1013 268 91 30 chr17 62798016 62798378 -22640102 - MLT2F LTR ERVL -279 384 1 4598 164 44 38 chr17 62798432 62798483 -22639997 + L1M4 LINE L1 4281 4330 -1854 2158 105 0 14 chr17 62798483 62798792 -22639688 + AluSg SINE Alu 1 305 0 4598 164 44 38 chr17 62798792 62799395 -22639085 + L1M4 LINE L1 4330 4928 -1256 1821 178 3 3 chr17 62799395 62799698 -22638782 + AluJo SINE Alu 1 303 -9 4598 164 44 38 chr17 62799698 62800440 -22638040 + L1M4 LINE L1 4928 5683 -501 243 0 0 0 chr17 62800444 62800471 -22638009 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 2124 99 0 21 chr17 62800471 62800753 -22637727 - AluSg SINE Alu -32 278 3 903 133 7 0 chr17 62800754 62800889 -22637591 - AluJb SINE Alu -176 136 1 1987 188 53 46 chr17 62800911 62801366 -22637114 + L1MB8 LINE L1 5647 6111 -67 2202 119 14 0 chr17 62801366 62801661 -22636819 - AluSx SINE Alu -13 299 1 1987 188 53 46 chr17 62801661 62801724 -22636756 + L1MB8 LINE L1 6111 6172 -6 389 304 13 13 chr17 62802499 62802657 -22635823 - MIR3 SINE MIR -31 177 20 311 341 52 0 chr17 62802896 62803069 -22635411 + MIR SINE MIR 32 213 -49 1053 293 90 23 chr17 62803527 62804172 -22634308 - L1MC4a LINE L1 -805 5341 5209 213 156 62 0 chr17 62805326 62805390 -22633090 + (TA)n Simple_repeat Simple_repeat 2 69 0 2350 88 3 0 chr17 62805871 62806167 -22632313 - AluY SINE Alu -14 297 1 951 151 41 0 chr17 62806191 62806337 -22632143 - FRAM SINE Alu -25 151 1 3618 77 218 19 chr17 62806415 62806989 -22631491 + LTR12 LTR ERV1 1 688 0 243 0 0 0 chr17 62807646 62807673 -22630807 + (TG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr17 62807893 62807913 -22630567 + (ACTAG)n Simple_repeat Simple_repeat 5 24 0 228 298 83 71 chr17 62809271 62809381 -22629099 - L2 LINE L2 0 3272 3158 2464 58 14 0 chr17 62809381 62809672 -22628808 + AluY SINE Alu 1 295 -16 228 298 83 71 chr17 62809672 62809729 -22628751 - L2 LINE L2 -114 3158 3103 1952 162 0 0 chr17 62809859 62810167 -22628313 + AluJb SINE Alu 2 309 -3 433 226 89 14 chr17 62810242 62810388 -22628092 - MIR SINE MIR -11 251 95 312 252 17 70 chr17 62810465 62810580 -22627900 + MIR SINE MIR 38 146 -62 378 202 105 9 chr17 62812768 62812882 -22625598 + L1MC5 LINE L1 7805 7929 -32 2511 62 0 0 chr17 62813203 62813494 -22624986 - AluY SINE Alu -20 291 1 231 333 33 0 chr17 62813553 62813643 -22624837 - L2 LINE L2 0 3313 3221 2297 99 3 3 chr17 62814783 62815085 -22623395 + AluSx SINE Alu 1 302 -10 1939 143 0 7 chr17 62816182 62816469 -22622011 - AluSx SINE Alu -19 293 9 2444 78 0 13 chr17 62818085 62818394 -22620086 + AluSg SINE Alu 1 305 -5 201 239 0 0 chr17 62819063 62819109 -22619371 - L2 LINE L2 0 3313 3268 * 213 364 30 10 chr17 62819106 62819205 -22619275 - L2 LINE L2 -220 3052 2952 279 331 98 26 chr17 62819354 62819771 -22618709 - L2 LINE L2 -557 2757 2311 322 307 27 33 chr17 62820387 62820537 -22617943 + MIR3 SINE MIR 47 195 -13 297 0 0 0 chr17 62821206 62821239 -22617241 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 2047 133 0 0 chr17 62821252 62821537 -22616943 - AluSx SINE Alu -27 285 1 2530 87 0 0 chr17 62821576 62821886 -22616594 + AluY SINE Alu 1 310 -1 280 211 13 53 chr17 62822076 62822152 -22616328 - MIR SINE MIR -147 115 43 216 0 0 0 chr17 62822970 62822994 -22615486 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 972 218 95 32 chr17 62823306 62823517 -22614963 - Charlie4a DNA MER1_type -1469 492 296 987 206 98 0 chr17 62823517 62823721 -22614759 + MER58A DNA MER1_type 1 224 0 972 218 95 32 chr17 62823721 62823766 -22614714 - Charlie4a DNA MER1_type -1665 296 255 2081 95 20 17 chr17 62823766 62824062 -22614418 + AluSg SINE Alu 1 297 -13 972 218 95 32 chr17 62824062 62824227 -22614253 - Charlie4a DNA MER1_type -1706 255 16 214 325 0 0 chr17 62824979 62825056 -22613424 - MIR SINE MIR -67 195 119 203 143 0 82 chr17 62825331 62825380 -22613100 + MIR3 SINE MIR 162 206 -2 348 370 56 0 chr17 62826161 62826323 -22612157 + L2 LINE L2 3102 3272 0 188 339 61 35 chr17 62826869 62826984 -22611496 + L2 LINE L2 2939 3056 -216 2298 100 0 10 chr17 62827172 62827471 -22611009 - AluSq SINE Alu -17 296 1 509 244 127 26 chr17 62827799 62828028 -22610452 + MIR SINE MIR 7 258 -4 2281 95 0 0 chr17 62828028 62828313 -22610167 + AluSx SINE Alu 1 285 -27 24 0 0 0 chr17 62828872 62828896 -22609584 + AT_rich Low_complexity Low_complexity 1 24 0 1570 149 13 70 chr17 62828925 62829226 -22609254 + AluJo SINE Alu 17 300 -12 207 254 17 0 chr17 62830750 62830809 -22607671 + C-rich Low_complexity Low_complexity 2 61 0 2430 106 0 0 chr17 62832686 62832998 -22605482 + AluSx SINE Alu 1 312 0 218 311 0 0 chr17 62833138 62833199 -22605281 - L2 LINE L2 -95 3177 3117 748 224 68 19 chr17 62833299 62833523 -22604957 + MIR SINE MIR 2 225 -37 2410 73 0 0 chr17 62834027 62834316 -22604164 + AluY SINE Alu 1 289 -22 201 333 49 8 chr17 62835626 62835749 -22602731 - MIR SINE MIR -132 130 3 484 288 38 27 chr17 62836448 62836632 -22601848 - MIR3 SINE MIR -2 206 21 2294 95 3 13 chr17 62837527 62837833 -22600647 - AluSx SINE Alu -9 303 1 2090 126 3 7 chr17 62838437 62838731 -22599749 + AluSx SINE Alu 1 293 -19 205 176 0 0 chr17 62838742 62838776 -22599704 + L2 LINE L2 3232 3265 -7 206 273 45 0 chr17 62839041 62839107 -22599373 + GA-rich Low_complexity Low_complexity 5 73 0 543 284 57 10 chr17 62841329 62841523 -22596957 + MIR3 SINE MIR 5 207 -1 2340 104 3 0 chr17 62842295 62842604 -22595876 - AluSx SINE Alu -2 310 1 2379 68 20 3 chr17 62842814 62843108 -22595372 + AluY SINE Alu 1 299 -12 275 316 57 85 chr17 62843321 62843535 -22594945 - MIR SINE MIR -40 222 17 250 211 213 53 chr17 62844189 62844335 -22594145 + MIR SINE MIR 12 167 -81 2403 78 0 0 chr17 62844337 62844648 -22593832 - AluSp SINE Alu 0 311 1 792 30 0 0 chr17 62845196 62845295 -22593185 + (GA)n Simple_repeat Simple_repeat 1 99 0 270 361 22 33 chr17 62845808 62845988 -22592492 + MIR SINE MIR 47 224 -38 290 298 132 18 chr17 62846539 62846653 -22591827 + L2 LINE L2 3146 3272 0 207 238 254 66 chr17 62846638 62846760 -22591720 - MIR3 SINE MIR -9 199 55 * 387 242 94 23 chr17 62846997 62847125 -22591355 + MIR3 SINE MIR 7 143 -65 713 133 117 17 chr17 62847132 62847252 -22591228 + FLAM_C SINE Alu 2 133 0 418 305 287 8 chr17 62848627 62849234 -22589246 - L2 LINE L2 -220 3052 2244 22 0 0 0 chr17 62849409 62849431 -22589049 + AT_rich Low_complexity Low_complexity 1 22 0 2383 98 7 0 chr17 62849438 62849745 -22588735 + AluSc SINE Alu 1 309 0 2112 124 0 17 chr17 62849925 62850224 -22588256 - AluSx SINE Alu -18 294 1 443 266 148 20 chr17 62850308 62850662 -22587818 + L1MC4a LINE L1 5525 5661 -460 1323 208 55 68 chr17 62850785 62850901 -22587579 - MLT1A1 LTR MaLR 0 365 249 2110 132 7 3 chr17 62850901 62851205 -22587275 + AluJb SINE Alu 3 307 -5 1323 208 55 68 chr17 62851205 62851305 -22587175 - MLT1A1 LTR MaLR -116 249 149 2454 56 0 3 chr17 62851305 62851591 -22586889 - AluSx SINE Alu -8 304 20 1323 208 55 68 chr17 62851591 62851739 -22586741 - MLT1A1 LTR MaLR -216 149 5 2609 37 0 3 chr17 62851740 62852055 -22586425 - AluY SINE Alu 0 314 1 399 293 60 0 chr17 62852324 62852440 -22586040 - L2 LINE L2 -9 3263 3141 222 37 0 0 chr17 62852647 62852674 -22585806 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 944 178 0 18 chr17 62852674 62852837 -22585643 - FRAM SINE Alu -16 160 1 557 274 60 24 chr17 62853150 62853318 -22585162 + MIR3 SINE MIR 25 198 -10 839 144 0 0 chr17 62853925 62854043 -22584437 + AluJb SINE Alu 1 118 -194 337 239 149 75 chr17 62854942 62855021 -22583459 - MIR SINE MIR -45 217 145 2385 110 0 0 chr17 62855021 62855330 -22583150 - AluSx SINE Alu -3 309 1 337 239 149 75 chr17 62855330 62855451 -22583029 - MIR SINE MIR -117 145 2 2414 101 3 0 chr17 62856026 62856334 -22582146 - AluSx SINE Alu -3 309 1 216 67 0 0 chr17 62856386 62856416 -22582064 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 304 286 13 13 chr17 62856480 62856557 -22581923 - L2 LINE L2 -85 3187 3111 468 244 50 69 chr17 62856691 62856799 -22581681 + MIR SINE MIR 79 185 -77 2344 92 10 0 chr17 62856799 62857104 -22581376 + AluSp SINE Alu 1 308 -5 468 244 50 69 chr17 62857104 62857155 -22581325 + MIR SINE MIR 185 235 -27 730 135 71 16 chr17 62858024 62858150 -22580330 + FLAM_C SINE Alu 1 133 0 234 182 36 18 chr17 62859179 62859234 -22579246 - MIR SINE MIR -89 119 64 2477 90 0 0 chr17 62859245 62859546 -22578934 + AluSx SINE Alu 1 301 -11 308 340 39 0 chr17 62860258 62860361 -22578119 - MIR SINE MIR -77 185 79 273 270 11 56 chr17 62860442 62860531 -22577949 + L2 LINE L2 3227 3311 -2 261 119 0 0 chr17 62861303 62861345 -22577135 + (A)n Simple_repeat Simple_repeat 1 42 0 2222 95 3 0 chr17 62861911 62862195 -22576285 + AluSx SINE Alu 13 297 -15 3962 258 142 42 chr17 62862195 62863787 -22574693 - L2 LINE L2 -1204 2110 360 216 352 108 40 chr17 62863851 62864027 -22574453 - MIR SINE MIR -73 189 2 1443 115 0 5 chr17 62864428 62864619 -22573861 - AluSx SINE Alu -23 289 100 727 88 0 0 chr17 62864768 62864859 -22573621 - AluSx SINE Alu -220 92 2 2191 132 7 7 chr17 62865156 62865466 -22573014 - AluSx SINE Alu -2 310 1 401 188 26 86 chr17 62865848 62865978 -22572502 - MER5A DNA MER1_type -21 168 34 413 330 110 29 chr17 62866897 62867106 -22571374 - L2 LINE L2 -51 3221 2996 300 53 0 0 chr17 62867331 62867369 -22571111 + (CA)n Simple_repeat Simple_repeat 2 39 0 207 162 0 0 chr17 62867916 62867953 -22570527 + GA-rich Low_complexity Low_complexity 3 39 0 185 321 47 19 chr17 62868824 62868930 -22569550 + L3 LINE CR1 1361 1469 -108 * 442 280 282 2 chr17 62868912 62869121 -22569359 - MIR SINE MIR -11 251 2 202 306 0 16 chr17 62869257 62869319 -22569161 - L2 LINE L2 -205 3067 3007 304 238 55 124 chr17 62869362 62869482 -22568998 - L3 LINE CR1 -200 1377 1275 2275 92 0 41 chr17 62869482 62869796 -22568684 - AluSx SINE Alu -11 301 1 304 238 55 124 chr17 62869796 62869877 -22568603 - L3 LINE CR1 -302 1275 1190 292 232 18 89 chr17 62869888 62870000 -22568480 - L2 LINE L2 -31 3241 3138 189 316 53 0 chr17 62870024 62870100 -22568380 + L2 LINE L2 3182 3261 -11 310 260 192 20 chr17 62870149 62870295 -22568185 - L2 LINE L2 -181 3091 2921 949 328 130 28 chr17 62870386 62871023 -22567457 - L2 LINE L2 -579 2735 2034 2455 87 0 0 chr17 62871166 62871466 -22567014 - AluY SINE Alu -11 300 1 23 33 0 0 chr17 62872530 62872560 -22565920 + AT_rich Low_complexity Low_complexity 1 30 0 1859 83 0 0 chr17 62872611 62872872 -22565608 + AluSg/x SINE Alu 65 325 0 972 166 49 39 chr17 62872892 62873049 -22565431 + L1MA9 LINE L1 5645 5806 -506 1855 187 0 3 chr17 62873049 62873348 -22565132 - AluJb SINE Alu -14 298 1 972 166 49 39 chr17 62873348 62873395 -22565085 + L1MA9 LINE L1 5806 5851 -461 336 217 0 0 chr17 62873500 62873560 -22564920 - L2 LINE L2 -3 3269 3210 395 350 21 0 chr17 62873935 62874075 -22564405 - MIR SINE MIR -100 162 20 314 239 111 26 chr17 62875542 62875659 -22562821 + MIR3 SINE MIR 45 171 -37 514 206 168 7 chr17 62875719 62875874 -22562606 - MER5A DNA MER1_type 0 189 10 326 237 17 76 chr17 62875928 62876046 -22562434 + MIR SINE MIR 102 212 -50 297 250 30 70 chr17 62876582 62876682 -22561798 + MIR SINE MIR 85 180 -82 598 285 68 36 chr17 62877905 62878154 -22560326 + MIR SINE MIR 2 258 -4 2478 75 3 0 chr17 62878403 62878708 -22559772 - AluSx SINE Alu -6 306 1 211 239 0 0 chr17 62879468 62879514 -22558966 + T-rich Low_complexity Low_complexity 1 46 0 1461 164 104 4 chr17 62879538 62879660 -22558820 + AluJo SINE Alu 1 109 -203 353 39 0 19 chr17 62879660 62879712 -22558768 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1461 164 104 4 chr17 62879712 62879857 -22558623 + AluJo SINE Alu 109 295 -17 2331 107 0 0 chr17 62879857 62880156 -22558324 - AluSg1 SINE Alu -10 299 1 546 284 154 47 chr17 62880161 62880221 -22558259 - L1ME4a LINE L1 -1 6120 6068 2099 135 3 0 chr17 62880221 62880517 -22557963 + AluSx SINE Alu 1 297 -15 546 284 154 47 chr17 62880517 62880794 -22557686 - L1ME4a LINE L1 -53 6068 5747 280 284 39 31 chr17 62880845 62880908 -22557572 - L1ME4a LINE L1 -457 5664 5603 2216 116 20 0 chr17 62880908 62881210 -22557270 - AluSx SINE Alu -4 308 1 280 284 39 31 chr17 62881210 62881273 -22557207 - L1ME4a LINE L1 -518 5603 5537 1454 135 179 43 chr17 62881705 62881910 -22556570 - LTR54B LTR ERV1 -2 496 320 2085 129 17 3 chr17 62881910 62882205 -22556275 - AluSx SINE Alu -13 299 1 1454 135 179 43 chr17 62882205 62882420 -22556060 - LTR54B LTR ERV1 -178 320 13 2217 120 10 3 chr17 62882420 62882719 -22555761 - AluSx SINE Alu -11 301 1 1454 135 179 43 chr17 62882719 62882734 -22555746 - LTR54B LTR ERV1 -485 13 1 881 168 41 137 chr17 62882813 62883177 -22555303 - MLT1B LTR MaLR -2 388 60 377 300 4 12 chr17 62883209 62883336 -22555144 - MIR SINE MIR -74 134 40 2411 177 102 21 chr17 62884025 62884506 -22553974 - MLT2B1 LTR ERVL 0 520 1 1887 139 29 0 chr17 62886848 62887143 -22551337 + AluJb SINE Alu 1 303 0 288 243 96 53 chr17 62887173 62887337 -22551143 + MIR3 SINE MIR 5 180 -37 362 227 173 0 chr17 62887427 62887537 -22550943 - MIR SINE MIR -20 242 114 258 81 0 0 chr17 62887735 62887772 -22550708 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 2156 105 0 0 chr17 62887772 62888048 -22550432 - AluSx SINE Alu -36 276 1 2183 125 7 0 chr17 62888275 62888571 -22549909 + AluSx SINE Alu 1 298 -14 287 262 149 9 chr17 62890032 62890139 -22548341 + MIR SINE MIR 32 153 -55 252 0 0 0 chr17 62890213 62890241 -22548239 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 755 160 0 0 chr17 62890241 62890360 -22548120 - FLAM_C SINE Alu -24 119 1 189 286 16 0 chr17 62890535 62890598 -22547882 + L2 LINE L2 1585 1648 -1666 2172 116 3 0 chr17 62892799 62893101 -22545379 - AluSg SINE Alu -7 303 1 1777 104 55 0 chr17 62893842 62894131 -22544349 + L1MA8 LINE L1 5983 6287 -4 313 303 246 0 chr17 62894140 62894282 -22544198 + MER5A DNA MER1_type 7 183 -6 413 286 115 21 chr17 62894704 62894938 -22543542 + L2 LINE L2 2067 2322 -992 299 369 88 11 chr17 62894991 62895253 -22543227 + L2 LINE L2 2792 3069 -244 2109 113 10 3 chr17 62895503 62895804 -22542676 - AluSq SINE Alu -10 303 1 1642 104 59 67 chr17 62895876 62896146 -22542334 - AluSx SINE Alu -44 268 1 1914 125 28 56 chr17 62896210 62896530 -22541950 - AluSx SINE Alu -1 311 1 2121 101 49 0 chr17 62896598 62896885 -22541595 - AluSx SINE Alu -11 301 1 341 222 101 117 chr17 62897107 62897355 -22541125 + MER112 DNA MER1_type 17 260 0 333 0 0 0 chr17 62897633 62897670 -22540810 + (TG)n Simple_repeat Simple_repeat 2 38 0 2171 117 0 10 chr17 62897979 62898287 -22540193 - AluSx SINE Alu -7 305 1 226 114 0 45 chr17 62898600 62898644 -22539836 + L3 LINE CR1 1534 1575 -2 306 246 17 93 chr17 62899965 62900083 -22538397 + MIR3 SINE MIR 85 193 -15 1558 86 0 0 chr17 62904460 62904657 -22533823 + AluSx SINE Alu 1 197 -115 2383 82 0 13 chr17 62904659 62904976 -22533504 - AluSq SINE Alu 0 313 1 782 169 0 0 chr17 62904976 62905100 -22533380 + AluSx SINE Alu 189 312 0 302 285 58 70 chr17 62906814 62906986 -22531494 - MIR3 SINE MIR -21 187 18 502 302 84 0 chr17 62908463 62908642 -22529838 - MIR SINE MIR 0 262 69 1700 142 80 0 chr17 62909198 62909487 -22528993 - AluJo SINE Alu 0 312 1 396 0 0 0 chr17 62911374 62911418 -22527062 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 238 326 235 14 chr17 62911423 62911708 -22526772 - L2 LINE L2 -15 3257 2910 256 386 15 8 chr17 62911787 62911919 -22526561 - L2 LINE L2 -498 2816 2684 332 231 29 48 chr17 62917346 62917450 -22521030 - MIR3 SINE MIR -25 183 82 383 224 51 0 chr17 62917872 62917970 -22520510 + MIR SINE MIR 48 150 -58 37 76 0 0 chr17 62919680 62919759 -22518721 + GC_rich Low_complexity Low_complexity 1 79 0 288 0 0 0 chr17 62920287 62920319 -22518161 + (CA)n Simple_repeat Simple_repeat 2 33 0 180 0 0 0 chr17 62920318 62920338 -22518142 + (CG)n Simple_repeat Simple_repeat 1 20 0 * 414 0 0 0 chr17 62921075 62921121 -22517359 + (CA)n Simple_repeat Simple_repeat 2 47 0 21 36 0 0 chr17 62922023 62922051 -22516429 + GC_rich Low_complexity Low_complexity 1 28 0 180 111 0 0 chr17 62922365 62922392 -22516088 + (CAGCC)n Simple_repeat Simple_repeat 5 31 0 59 38 0 0 chr17 62922503 62922583 -22515897 + GC_rich Low_complexity Low_complexity 1 80 0 276 120 0 0 chr17 62922761 62922811 -22515669 + (CGG)n Simple_repeat Simple_repeat 2 51 0 213 204 0 0 chr17 62922994 62923043 -22515437 + (CGGG)n Simple_repeat Simple_repeat 4 52 0 212 162 0 0 chr17 62925091 62925128 -22513352 + T-rich Low_complexity Low_complexity 5 41 0 301 209 33 77 chr17 62925137 62925228 -22513252 - L1MDa LINE L1 -4038 2502 2416 308 333 48 54 chr17 62925238 62925424 -22513056 + HAL1 LINE L1 1053 1237 -1270 200 413 6 29 chr17 62927351 62927523 -22510957 + MIR3 SINE MIR 33 200 -8 273 286 62 0 chr17 62928417 62928529 -22509951 + MIR SINE MIR 20 138 -70 218 286 0 0 chr17 62930522 62930592 -22507888 + (CCG)n Simple_repeat Simple_repeat 1 70 0 202 209 55 11 chr17 62931982 62932073 -22506407 + (CGG)n Simple_repeat Simple_repeat 1 95 0 201 306 27 95 chr17 62935744 62935891 -22502589 - MIR3 SINE MIR -16 192 56 340 252 47 39 chr17 62936083 62936210 -22502270 + MIR3 SINE MIR 32 159 -49 337 331 78 7 chr17 62936719 62936861 -22501619 - MIR SINE MIR -47 215 64 270 320 40 16 chr17 62937086 62937211 -22501269 - MIR SINE MIR -34 228 101 188 355 228 5 chr17 62937331 62937528 -22500952 + MIR SINE MIR 20 260 -2 245 268 281 12 chr17 62937582 62937746 -22500734 - MIR SINE MIR -45 217 10 22 35 0 0 chr17 62938999 62939028 -22499452 + AT_rich Low_complexity Low_complexity 1 29 0 2219 100 3 10 chr17 62940107 62940408 -22498072 - AluSp SINE Alu -14 299 1 2277 129 83 25 chr17 62940568 62940917 -22497563 + MER44D DNA MER2_type 87 522 -1965 1768 176 29 35 chr17 62940917 62941263 -22497217 + MER7A DNA MER2_type 1 342 -4 2277 129 83 25 chr17 62941263 62941347 -22497133 + MER44D DNA MER2_type 522 600 -5 546 243 132 34 chr17 62941366 62941691 -22496789 - L1ME4a LINE L1 -224 5897 5541 2545 70 0 0 chr17 62941764 62942066 -22496414 - AluSg SINE Alu -8 302 1 2388 226 20 20 chr17 62942068 62942679 -22495801 - L1MD2 LINE L1 -229 6524 5914 1255 193 22 67 chr17 62942683 62943294 -22495186 - L1MD2 LINE L1 -3583 2957 2320 5913 93 0 16 chr17 62943294 62943587 -22494893 - L1PB1 LINE L1 0 6151 5855 2286 116 0 0 chr17 62943587 62943888 -22494592 + AluSc SINE Alu 1 301 -8 5913 93 0 16 chr17 62943888 62943965 -22494515 - L1PB1 LINE L1 -296 5855 5778 297 0 0 0 chr17 62943965 62943998 -22494482 + (TG)n Simple_repeat Simple_repeat 2 34 0 5913 93 0 16 chr17 62943998 62944884 -22493596 - L1PB1 LINE L1 -373 5778 4900 1255 193 22 67 chr17 62944884 62944901 -22493579 - L1MD2 LINE L1 -4219 2321 2360 41102 33 21 0 chr17 62944911 62950970 -22487510 + L1PA2 LINE L1 1 6155 0 5533 226 66 40 chr17 62950978 62951992 -22486488 - L1MD2 LINE L1 -4167 2373 1386 1609 185 3 11 chr17 62951992 62952305 -22486175 + AluJo SINE Alu 1 311 0 5533 226 66 40 chr17 62952305 62952379 -22486101 - L1MD2 LINE L1 -5154 1386 1315 976 134 5 70 chr17 62952379 62952565 -22485915 - L1MC1 LINE L1 -17 6316 6143 5533 226 66 40 chr17 62952565 62953436 -22485044 - L1MD2 LINE L1 -5225 1315 284 620 320 67 7 chr17 62953904 62954307 -22484173 + L1M4 LINE L1 3660 4086 -2060 21 0 0 0 chr17 62954362 62954383 -22484097 + AT_rich Low_complexity Low_complexity 1 21 0 313 312 48 14 chr17 62954571 62954863 -22483617 + L1M4 LINE L1 4390 4691 -1455 240 236 47 9 chr17 62954895 62955001 -22483479 - L1MC4 LINE L1 -1 8041 7932 196 269 45 0 chr17 62955063 62955130 -22483350 + L2 LINE L2 1736 1805 -1509 1077 233 128 28 chr17 62955192 62955772 -22482708 - L1MC5 LINE L1 -44 7917 7280 273 229 107 38 chr17 62956273 62956404 -22482076 + L1ME4a LINE L1 5977 6116 -5 2153 100 0 0 chr17 62956429 62956709 -22481771 - AluSg1 SINE Alu -29 280 1 2189 123 0 3 chr17 62957624 62957924 -22480556 - AluSq SINE Alu -14 299 1 201 294 11 76 chr17 62958168 62958260 -22480220 + L2 LINE L2 3171 3256 -16 23 54 0 0 chr17 62958755 62958792 -22479688 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr17 62960215 62960244 -22478236 + AT_rich Low_complexity Low_complexity 1 29 0 249 273 30 15 chr17 62961912 62961978 -22476502 - MLT1I LTR MaLR -99 310 244 525 161 253 31 chr17 62962147 62962309 -22476171 - MER3 DNA MER1_type -1 208 11 232 326 22 73 chr17 62965110 62965288 -22473192 + L2 LINE L2 2595 2763 -551 2105 123 3 0 chr17 62965456 62965756 -22472724 + AluSx SINE Alu 1 301 -11 320 233 0 27 chr17 62965762 62965835 -22472645 + MIR SINE MIR 43 113 -95 210 71 0 0 chr17 62968541 62968569 -22469911 + (A)n Simple_repeat Simple_repeat 1 28 0 421 288 66 15 chr17 62968990 62969154 -22469326 - MIR SINE MIR -35 173 1 257 303 220 0 chr17 62969154 62969247 -22469233 + MIR3 SINE MIR 76 197 -11 181 277 277 20 chr17 62969331 62969479 -22469001 - MIR SINE MIR 0 262 77 1062 214 76 4 chr17 62970303 62970579 -22467901 + MER58B DNA MER1_type 40 335 -6 225 139 0 0 chr17 62970653 62970696 -22467784 + (CTG)n Simple_repeat Simple_repeat 3 45 0 759 215 102 11 chr17 62971059 62971245 -22467235 - MER20 DNA MER1_type 0 219 17 1985 131 3 3 chr17 62971258 62971540 -22466940 - AluSx SINE Alu -30 282 1 281 359 24 34 chr17 62971792 62972001 -22466479 - MIR SINE MIR -34 228 22 2284 106 7 0 chr17 62972168 62972469 -22466011 + AluSx SINE Alu 1 303 -9 917 209 40 5 chr17 62972762 62972963 -22465517 + MER3 DNA MER1_type 2 209 0 226 391 74 47 chr17 62974349 62974605 -22463875 - L2 LINE L2 -44 3228 2966 2202 113 0 3 chr17 62974635 62974926 -22463554 + AluSx SINE Alu 1 290 -22 21 36 0 0 chr17 62975396 62975424 -22463056 + AT_rich Low_complexity Low_complexity 1 28 0 1807 188 0 0 chr17 62975957 62976255 -22462225 + AluJo SINE Alu 1 298 -14 2472 73 0 0 chr17 62976302 62976602 -22461878 + AluSc SINE Alu 1 300 -9 509 249 140 36 chr17 62976780 62977001 -22461479 - MIR SINE MIR -14 248 5 377 256 43 24 chr17 62977382 62977546 -22460934 + L1MC5 LINE L1 7751 7917 -44 2243 111 3 0 chr17 62978209 62978515 -22459965 + AluSx SINE Alu 1 307 -5 1799 143 10 36 chr17 62980788 62981089 -22457391 - AluJb SINE Alu -10 302 10 1776 146 3 53 chr17 62981607 62981763 -22456717 - AluJb SINE Alu -23 289 154 2259 102 0 3 chr17 62981763 62982057 -22456423 - AluSx SINE Alu -19 293 1 1776 146 3 53 chr17 62982057 62982202 -22456278 - AluJb SINE Alu -158 154 3 2356 95 3 0 chr17 62982386 62982691 -22455789 + AluSp SINE Alu 1 306 -7 226 184 69 161 chr17 62982990 62983077 -22455403 - MIR SINE MIR -1 261 183 338 280 56 16 chr17 62983152 62983277 -22455203 - Charlie8 DNA MER1_type -2193 224 95 232 213 16 16 chr17 62983315 62983376 -22455104 - MIR SINE MIR -54 208 148 239 246 0 15 chr17 62985752 62985806 -22452674 + (CTA)n Simple_repeat Simple_repeat 3 57 -9 1305 149 30 30 chr17 62985806 62986041 -22452439 + MER46A DNA MER2_type 1 235 -1 239 246 0 15 chr17 62986041 62986051 -22452429 + (CTA)n Simple_repeat Simple_repeat 57 66 0 285 233 19 78 chr17 62986138 62986152 -22452328 - L2 LINE L2 -2 3270 3257 1635 195 35 0 chr17 62986152 62986439 -22452041 - AluJb SINE Alu -15 297 1 285 233 19 78 chr17 62986439 62986527 -22451953 - L2 LINE L2 -15 3257 3174 542 106 78 0 chr17 62986689 62986792 -22451688 - LTR12 LTR ERV1 0 714 73 308 200 33 22 chr17 62986794 62986884 -22451596 - LTR30 LTR ERV1 -79 643 553 645 113 42 190 chr17 62986885 62987134 -22451346 - LTR12 LTR ERV1 -429 1523 100 238 231 0 0 chr17 62987134 62987186 -22451294 - LTR30 LTR ERV1 -670 52 1 231 204 0 0 chr17 62988868 62988917 -22449563 + GA-rich Low_complexity Low_complexity 4 52 0 1809 150 3 29 chr17 62989119 62989425 -22449055 - AluJo SINE Alu -14 298 1 255 152 0 0 chr17 62992235 62992281 -22446199 + CT-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr17 62994716 62994737 -22443743 + AT_rich Low_complexity Low_complexity 1 21 0 271 167 0 0 chr17 62997675 62997717 -22440763 - L2 LINE L2 -3 3310 3269 2507 59 0 0 chr17 62997824 62998127 -22440353 + AluY SINE Alu 1 303 -8 2316 88 3 35 chr17 62998386 62998705 -22439775 + AluSp SINE Alu 1 309 -4 1718 148 53 92 chr17 62998957 62999054 -22439426 + MSTD LTR MaLR 1 100 -296 665 180 8 23 chr17 62999054 62999182 -22439298 + FLAM_C SINE Alu 3 128 -5 1718 148 53 92 chr17 62999182 62999496 -22438984 + MSTD LTR MaLR 100 396 0 2148 114 40 0 chr17 63000097 63000394 -22438086 + AluSp SINE Alu 1 309 -4 21 57 0 0 chr17 63000395 63000430 -22438050 + AT_rich Low_complexity Low_complexity 1 35 0 449 335 60 0 chr17 63000494 63000676 -22437804 - MIR SINE MIR -55 207 15 2162 133 0 0 chr17 63001073 63001375 -22437105 - AluSx SINE Alu -6 306 5 1584 157 0 96 chr17 63001384 63001728 -22436752 - AluJo SINE Alu -1 311 1 307 317 89 16 chr17 63001994 63002117 -22436363 - MIR3 SINE MIR -46 162 31 709 146 0 0 chr17 63004138 63004241 -22434239 - FLAM_C SINE Alu -27 116 14 2144 112 3 0 chr17 63004540 63004835 -22433645 - AluSx SINE Alu -16 296 1 1696 246 74 32 chr17 63004899 63004960 -22433520 + L1MEc LINE L1 65 122 -6274 2449 77 0 6 chr17 63004960 63005273 -22433207 - AluY SINE Alu 0 311 1 1696 246 74 32 chr17 63005273 63005764 -22432716 + L1MEc LINE L1 122 640 -5756 2619 211 45 58 chr17 63005848 63006306 -22432174 + L1MEc LINE L1 1972 2435 -3780 1619 189 19 39 chr17 63006306 63006613 -22431867 - AluJo SINE Alu -10 302 2 2619 211 45 58 chr17 63006613 63007035 -22431445 + L1MEc LINE L1 2435 2861 -3354 2301 52 7 14 chr17 63007035 63007324 -22431156 + AluY SINE Alu 1 287 -24 2619 211 45 58 chr17 63007324 63007385 -22431095 + L1MEc LINE L1 2861 2921 -3294 2206 67 3 14 chr17 63007385 63007690 -22430790 + AluY SINE Alu 1 302 0 2619 211 45 58 chr17 63007690 63007849 -22430631 + L1MEc LINE L1 2921 3081 -3134 1991 129 10 7 chr17 63007849 63008144 -22430336 + AluSx SINE Alu 1 296 -16 2619 211 45 58 chr17 63008144 63008307 -22430173 + L1MEc LINE L1 3081 3187 -3028 1487 188 4 11 chr17 63008307 63008573 -22429907 + AluJo SINE Alu 30 293 -19 2619 211 45 58 chr17 63008573 63008631 -22429849 + L1MEc LINE L1 3187 3244 -2971 317 70 0 18 chr17 63008770 63008827 -22429653 - L1MA8 LINE L1 -4 6287 6232 2545 159 27 45 chr17 63008831 63009384 -22429096 - L1MA7 LINE L1 -136 6155 5613 1643 173 61 4 chr17 63009805 63010083 -22428397 + AluJo SINE Alu 1 294 -18 623 165 0 0 chr17 63010272 63010381 -22428099 - L1MA7 LINE L1 -664 5627 5519 424 231 0 31 chr17 63010399 63010529 -22427951 + L1ME1 LINE L1 5204 5329 -817 1971 159 0 10 chr17 63010535 63010849 -22427631 + AluJo SINE Alu 1 311 -1 26 30 0 0 chr17 63010939 63010972 -22427508 + AT_rich Low_complexity Low_complexity 1 33 0 1713 161 0 14 chr17 63011207 63011543 -22426937 - AluJb SINE Alu 0 332 1 2835 231 23 25 chr17 63011559 63012392 -22426088 + L1ME1 LINE L1 5315 6145 -21 21 0 0 0 chr17 63013763 63013784 -22424696 + AT_rich Low_complexity Low_complexity 1 21 0 212 194 0 0 chr17 63014538 63014574 -22423906 + T-rich Low_complexity Low_complexity 1 36 0 310 213 125 0 chr17 63015513 63015593 -22422887 + L2 LINE L2 3192 3281 -32 1633 150 22 29 chr17 63015617 63015890 -22422590 + AluJo SINE Alu 1 271 -41 1569 197 3 10 chr17 63016546 63016845 -22421635 - AluJo SINE Alu -5 307 11 406 218 28 28 chr17 63017036 63017178 -22421302 - L1MC5 LINE L1 -48 7913 7772 1210 212 68 15 chr17 63017180 63017506 -22420974 - L1MB8 LINE L1 -2 6176 5834 42 48 0 0 chr17 63018068 63018131 -22420349 + AT_rich Low_complexity Low_complexity 1 63 0 316 202 18 34 chr17 63018177 63018335 -22420145 - MER82 DNA MER2_type -247 406 200 555 178 68 74 chr17 63018752 63018915 -22419565 - MER82 DNA MER2_type -485 168 7 2922 212 81 18 chr17 63018936 63019779 -22418701 + L1ME1 LINE L1 5255 6149 -17 24 0 0 0 chr17 63019978 63020002 -22418478 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 63020742 63020763 -22417717 + AT_rich Low_complexity Low_complexity 1 21 0 2497 68 0 0 chr17 63021398 63021691 -22416789 - AluY SINE Alu -18 293 1 201 74 0 0 chr17 63022499 63022526 -22415954 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 1793 180 27 0 chr17 63023511 63023806 -22414674 + AluJb SINE Alu 2 304 -8 264 333 207 34 chr17 63023928 63024914 -22413566 - L2 LINE L2 -337 2977 1821 2279 111 0 3 chr17 63024925 63025232 -22413248 + AluSx SINE Alu 1 306 -6 1179 142 9 75 chr17 63025232 63025276 -22413204 + AluJo SINE Alu 83 128 -184 2132 121 16 0 chr17 63025276 63025582 -22412898 - AluSq SINE Alu 0 313 3 1179 142 9 75 chr17 63025582 63025749 -22412731 + AluJo SINE Alu 128 280 -32 863 168 147 42 chr17 63025766 63025957 -22412523 + AluJo SINE Alu 82 292 -20 2287 78 0 0 chr17 63026175 63026491 -22411989 + AluY SINE Alu 1 316 0 265 242 93 82 chr17 63026600 63026646 -22411834 + L1MEd LINE L1 1062 1106 -5013 2288 99 0 3 chr17 63026646 63026948 -22411532 + AluSx SINE Alu 3 303 -9 265 242 93 82 chr17 63026948 63027095 -22411385 + L1MEd LINE L1 1106 1257 -4862 347 330 68 55 chr17 63027098 63027334 -22411146 + HAL1 LINE L1 1373 1611 -896 2146 137 0 0 chr17 63027662 63027969 -22410511 + AluSx SINE Alu 2 308 -4 2576 68 3 0 chr17 63028157 63028467 -22410013 + AluSp SINE Alu 1 311 -2 2198 119 0 0 chr17 63028516 63028819 -22409661 + AluSx SINE Alu 1 303 -9 195 42 0 0 chr17 63028823 63028847 -22409633 + (GGGGA)n Simple_repeat Simple_repeat 2 25 0 2327 96 3 3 chr17 63029139 63029440 -22409040 + AluSq SINE Alu 1 301 -12 1886 136 0 60 chr17 63030043 63030360 -22408120 - AluJb SINE Alu -14 298 1 490 214 0 10 chr17 63030367 63030465 -22408015 - FLAM_A SINE Alu -20 122 26 243 263 147 11 chr17 63032227 63032322 -22406158 - MIR3 SINE MIR -11 197 90 182 354 152 0 chr17 63032686 63032785 -22405695 + L2 LINE L2 3149 3262 -10 2500 75 0 0 chr17 63032814 63033121 -22405359 - AluY SINE Alu -4 307 1 312 380 117 0 chr17 63035031 63035239 -22403241 - MIR SINE MIR 0 262 31 2294 94 0 3 chr17 63036441 63036739 -22401741 - AluSg SINE Alu -13 297 1 207 0 0 0 chr17 63036741 63036764 -22401716 + (T)n Simple_repeat Simple_repeat 1 23 0 181 207 0 0 chr17 63036772 63036801 -22401679 - MIR SINE MIR -30 232 204 1174 72 0 20 chr17 63036815 63036968 -22401512 - AluY SINE Alu -11 300 151 406 294 63 0 chr17 63036980 63037106 -22401374 - MIR SINE MIR -109 153 20 29 28 0 0 chr17 63037174 63037210 -22401270 + AT_rich Low_complexity Low_complexity 1 36 0 26 50 0 0 chr17 63037740 63037780 -22400700 + AT_rich Low_complexity Low_complexity 1 40 0 2081 136 13 0 chr17 63037834 63038135 -22400345 - AluSq SINE Alu -6 307 3 1612 156 82 4 chr17 63039451 63039720 -22398760 + AluJb SINE Alu 1 290 -22 2343 100 0 3 chr17 63041201 63041511 -22396969 + AluSp SINE Alu 3 311 -2 694 302 31 0 chr17 63042021 63042213 -22396267 - MIR SINE MIR -59 203 6 329 264 96 16 chr17 63042217 63042342 -22396138 - L1ME LINE L1 -315 5806 5672 825 205 0 0 chr17 63046927 63047083 -22391397 - FRAM SINE Alu -20 156 1 181 177 31 21 chr17 63047224 63047320 -22391160 + (TA)n Simple_repeat Simple_repeat 2 98 0 181 315 82 14 chr17 63047721 63047794 -22390686 + L2 LINE L2 3160 3237 -35 2171 104 0 0 chr17 63047835 63048149 -22390331 - AluSg SINE Alu 0 314 1 1845 138 11 7 chr17 63048774 63049079 -22389401 + AluSx SINE Alu 8 313 0 2410 73 0 22 chr17 63049084 63049397 -22389083 + AluY SINE Alu 1 306 -5 379 267 112 12 chr17 63049987 63050148 -22388332 + MIR3 SINE MIR 30 206 -2 467 244 289 0 chr17 63050445 63050580 -22387900 + MER5B DNA MER1_type 1 174 -4 23 54 0 0 chr17 63050708 63050745 -22387735 + AT_rich Low_complexity Low_complexity 1 37 0 2248 75 14 0 chr17 63051198 63051523 -22386957 - AluSx SINE Alu 0 329 1 2177 88 0 7 chr17 63051681 63051987 -22386493 + AluY SINE Alu 1 304 0 249 263 175 0 chr17 63053441 63053555 -22384925 - MER94 DNA DNA 0 134 1 2312 105 0 0 chr17 63054695 63055000 -22383480 + AluSg SINE Alu 1 305 -5 2459 61 3 0 chr17 63055500 63055795 -22382685 + AluY SINE Alu 1 296 -15 453 267 157 47 chr17 63056475 63056711 -22381769 + MIR SINE MIR 1 262 0 317 246 61 18 chr17 63057027 63057141 -22381339 + MIR3 SINE MIR 84 202 -6 2288 91 10 13 chr17 63057833 63058140 -22380340 - AluSx SINE Alu -6 306 1 199 313 210 23 chr17 63059032 63059246 -22379234 - L2 LINE L2 -215 3057 2804 252 294 10 49 chr17 63059278 63059380 -22379100 + MIR SINE MIR 32 129 -133 403 196 0 0 chr17 63059385 63059482 -22378998 - MER3 DNA MER1_type 0 2550 2454 569 120 0 0 chr17 63059492 63059593 -22378887 - MER3 DNA MER1_type -98 111 35 685 129 0 52 chr17 63060760 63060876 -22377604 + FLAM_A SINE Alu 18 127 -15 458 234 66 15 chr17 63061395 63061532 -22376948 - MIR SINE MIR -10 252 109 1172 102 23 0 chr17 63062266 63062442 -22376038 - L1MA3 LINE L1 0 6305 6126 1350 95 0 128 chr17 63062445 63062509 -22375971 - L1MA1 LINE L1 -6 6296 6225 2420 96 0 0 chr17 63062509 63062811 -22375669 + AluSx SINE Alu 3 304 -8 1350 95 0 128 chr17 63062811 63062918 -22375562 - L1MA1 LINE L1 -77 6225 6170 2155 134 0 3 chr17 63062918 63063224 -22375256 - AluSq SINE Alu -6 307 3 1350 95 0 128 chr17 63063224 63063324 -22375156 - L1MA1 LINE L1 -132 6170 6059 11135 154 24 31 chr17 63063324 63063532 -22374948 - L1MA2 LINE L1 -166 6138 5930 2107 123 0 0 chr17 63063532 63063816 -22374664 - AluSx SINE Alu -28 284 1 11135 154 24 31 chr17 63063816 63066050 -22372430 - L1MA2 LINE L1 -374 5930 3733 225 65 0 0 chr17 63066050 63066081 -22372399 + (CTAGT)n Simple_repeat Simple_repeat 5 35 0 11135 154 24 31 chr17 63066081 63066861 -22371619 - L1MA2 LINE L1 -2571 3733 2949 497 264 55 55 chr17 63067227 63067409 -22371071 + MER58A DNA MER1_type 37 218 -6 26 0 0 0 chr17 63068147 63068173 -22370307 + AT_rich Low_complexity Low_complexity 1 26 0 2166 115 0 3 chr17 63068430 63068725 -22369755 - AluSg SINE Alu -16 294 1 618 210 94 116 chr17 63068797 63069169 -22369311 - L1ME3A LINE L1 -92 6078 5715 239 235 176 0 chr17 63069182 63069267 -22369213 - L1ME3A LINE L1 -527 5637 5538 2190 206 73 4 chr17 63069410 63069905 -22368575 - L1MB5 LINE L1 -7 6167 5639 378 0 0 0 chr17 63069969 63070011 -22368469 + (CA)n Simple_repeat Simple_repeat 2 43 0 1416 132 18 0 chr17 63070241 63070469 -22368011 + L1PA16 LINE L1 5928 6159 -7 24 67 0 0 chr17 63070475 63070520 -22367960 + AT_rich Low_complexity Low_complexity 1 45 0 189 275 0 0 chr17 63070926 63070966 -22367514 - L2 LINE L2 -94 3219 3180 1215 224 73 67 chr17 63071778 63072243 -22366237 + Charlie4a DNA MER1_type 41 508 0 2273 77 0 45 chr17 63072761 63072934 -22365546 - AluSx SINE Alu -16 296 142 2111 117 0 29 chr17 63072934 63073241 -22365239 - AluSx SINE Alu -14 298 1 2273 77 0 45 chr17 63073241 63073377 -22365103 - AluSx SINE Alu -170 142 1 2799 263 140 33 chr17 63073520 63074731 -22363749 - L2 LINE L2 -2 3270 1872 1936 155 6 29 chr17 63074731 63075073 -22363407 - MER1B DNA MER1_type -2 335 2 2799 263 140 33 chr17 63075073 63075231 -22363249 - L2 LINE L2 -1400 1872 1732 337 176 27 0 chr17 63075262 63075336 -22363144 - L2 LINE L2 -1942 1372 1297 5576 171 38 17 chr17 63075639 63077037 -22361443 - L1PA16 LINE L1 -20 6146 4692 2131 116 0 28 chr17 63077037 63077356 -22361124 + AluSg SINE Alu 1 310 0 5576 171 38 17 chr17 63077356 63078077 -22360403 - L1PA16 LINE L1 -1474 4692 3988 683 292 99 5 chr17 63078139 63078341 -22360139 + MIR SINE MIR 28 248 -14 269 111 95 32 chr17 63079786 63079849 -22358631 - L1MC1 LINE L1 0 6333 6267 25 0 0 0 chr17 63079951 63079976 -22358504 + AT_rich Low_complexity Low_complexity 1 25 0 267 226 89 55 chr17 63080710 63080856 -22357624 - HAL1 LINE L1 0 2507 2357 * 353 230 162 45 chr17 63080842 63081107 -22357373 - HAL1 LINE L1 -1233 1274 979 354 45 0 0 chr17 63081152 63081196 -22357284 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 660 181 0 38 chr17 63081236 63081369 -22357111 - FLAM_C SINE Alu -11 132 5 330 284 21 21 chr17 63081377 63081472 -22357008 + MER5B DNA MER1_type 1 95 -83 220 100 50 67 chr17 63081516 63081576 -22356904 + T-rich Low_complexity Low_complexity 5 63 0 364 297 29 34 chr17 63081596 63081771 -22356709 - HAL1 LINE L1 -1693 814 641 3199 27 0 0 chr17 63083576 63083950 -22354530 - L1PA2 LINE L1 0 6155 5782 23 0 0 0 chr17 63084586 63084609 -22353871 + AT_rich Low_complexity Low_complexity 1 23 0 207 0 0 0 chr17 63085821 63085844 -22352636 + (CA)n Simple_repeat Simple_repeat 2 24 0 180 97 0 0 chr17 63086468 63086499 -22351981 + (A)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr17 63087848 63087868 -22350612 + (T)n Simple_repeat Simple_repeat 1 20 0 227 128 0 26 chr17 63089388 63089427 -22349053 - L2 LINE L2 -1 3271 3234 1041 216 11 18 chr17 63092096 63092369 -22346111 + L1M4 LINE L1 4735 5005 -1141 * 2237 216 11 7 chr17 63092368 63092911 -22345569 + L1M4 LINE L1 4091 4635 -1511 1503 180 46 11 chr17 63093064 63093348 -22345132 - AluJo SINE Alu -8 304 11 615 173 33 159 chr17 63095990 63096070 -22342410 - L1MC4 LINE L1 -2 8040 7952 2450 90 0 0 chr17 63096070 63096381 -22342099 - AluSx SINE Alu -1 311 1 615 173 33 159 chr17 63096381 63096601 -22341879 - L1MC4 LINE L1 -90 7952 7778 1715 129 16 18 chr17 63096851 63097142 -22341338 + MER1B DNA MER1_type 1 338 -1 27 0 0 0 chr17 63097454 63097481 -22340999 + AT_rich Low_complexity Low_complexity 1 27 0 1862 148 3 20 chr17 63098834 63099139 -22339341 - AluJb SINE Alu -12 300 1 245 283 30 61 chr17 63099221 63099320 -22339160 + MIR SINE MIR 16 111 -97 2209 89 20 3 chr17 63100020 63100323 -22338157 - AluY SINE Alu -3 308 1 1374 206 31 4 chr17 63100455 63100712 -22337768 - AluJo SINE Alu -48 264 1 353 292 11 11 chr17 63103107 63103196 -22335284 + MER5A DNA MER1_type 18 106 -83 259 248 37 64 chr17 63103286 63103395 -22335085 - MER112 DNA MER1_type -153 107 2 21 36 0 0 chr17 63105058 63105086 -22333394 + AT_rich Low_complexity Low_complexity 1 28 0 683 260 63 54 chr17 63105425 63105648 -22332832 + MIR SINE MIR 36 260 -2 21 0 0 0 chr17 63105771 63105792 -22332688 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 63107620 63107641 -22330839 + AT_rich Low_complexity Low_complexity 1 21 0 225 196 0 20 chr17 63108435 63108486 -22329994 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 21 89 0 0 chr17 63108792 63108848 -22329632 + AT_rich Low_complexity Low_complexity 1 56 0 898 176 39 44 chr17 63110980 63111162 -22327318 - MER5A DNA MER1_type -1 188 8 533 279 102 19 chr17 63111133 63111348 -22327132 - MIR SINE MIR -27 235 3 * 291 116 0 0 chr17 63112021 63112064 -22326416 - MADE1 DNA Mariner -37 43 1 297 356 19 10 chr17 63112913 63113017 -22325463 - MIR SINE MIR -110 152 48 2429 82 3 0 chr17 63113083 63113389 -22325091 + AluSg SINE Alu 1 307 -3 522 157 12 0 chr17 63113453 63113536 -22324944 - Tigger7 DNA MER2_type 0 2487 2404 1408 159 90 0 chr17 63113549 63113794 -22324686 - Tigger7 DNA MER2_type -466 267 1 975 155 17 17 chr17 63114681 63114855 -22323625 - L1MC1 LINE L1 -3 6330 6157 1566 131 0 0 chr17 63115271 63115485 -22322995 + AluSq SINE Alu 3 216 -97 293 115 0 0 chr17 63115485 63115537 -22322943 + AluSq SINE Alu 252 303 0 461 226 161 0 chr17 63115854 63115890 -22322590 - L1MA10 LINE L1 0 6334 6299 689 285 54 8 chr17 63115890 63116056 -22322424 - L1ME1 LINE L1 -47 6119 5937 2015 70 93 11 chr17 63116056 63116326 -22322154 - AluSc SINE Alu -11 298 7 689 285 54 8 chr17 63116326 63116401 -22322079 - L1ME1 LINE L1 -229 5937 5867 1870 128 35 0 chr17 63116438 63116726 -22321754 - AluSx SINE Alu 0 312 15 2268 173 87 26 chr17 63116753 63117205 -22321275 - L1MB7 LINE L1 -24 6160 5674 2342 82 7 0 chr17 63117205 63117499 -22320981 - AluY SINE Alu -15 296 1 2268 173 87 26 chr17 63117499 63117542 -22320938 - L1MB7 LINE L1 -510 5674 5635 198 135 54 0 chr17 63119639 63119676 -22318804 - L2 LINE L2 -17 3296 3258 286 296 0 0 chr17 63120314 63120385 -22318095 - L2 LINE L2 -557 2757 2687 2344 105 0 6 chr17 63120385 63120699 -22317781 + AluSx SINE Alu 1 312 0 1960 141 0 10 chr17 63120862 63121153 -22317327 + AluSx SINE Alu 1 288 -24 4395 154 42 49 chr17 63121213 63121949 -22316531 + MER6 DNA MER2_type 1 732 -133 2426 67 0 0 chr17 63121949 63122246 -22316234 + AluY SINE Alu 5 301 -10 4395 154 42 49 chr17 63122246 63122380 -22316100 + MER6 DNA MER2_type 732 865 0 194 275 0 0 chr17 63122441 63122481 -22315999 + MIR SINE MIR 42 81 -127 1827 138 39 7 chr17 63122556 63122839 -22315641 - AluSc SINE Alu -16 293 2 1841 181 0 13 chr17 63123008 63123312 -22315168 + AluJo SINE Alu 3 302 -10 1949 128 0 4 chr17 63123312 63123585 -22314895 + AluSx SINE Alu 1 272 -40 294 29 0 0 chr17 63123595 63123630 -22314850 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 1053 39 8 34 chr17 63123629 63123891 -22314589 + (TA)n Simple_repeat Simple_repeat 1 255 0 2009 144 24 12 chr17 63124173 63124512 -22313968 + MER2 DNA MER2_type 2 344 0 1151 252 21 18 chr17 63126004 63126290 -22312190 + L1MEc LINE L1 43 329 -6067 728 233 0 0 chr17 63126319 63126465 -22312015 + MER58A DNA MER1_type 47 192 -32 445 268 128 6 chr17 63126477 63126656 -22311824 + L1MEc LINE L1 334 534 -5862 1427 201 4 11 chr17 63126820 63127083 -22311397 + AluJo SINE Alu 25 285 -27 1558 227 123 80 chr17 63127108 63127500 -22310980 + L1MEc LINE L1 1098 1472 -4924 2309 109 3 3 chr17 63127500 63127812 -22310668 - AluSp SINE Alu -1 312 1 1558 227 123 80 chr17 63127812 63128410 -22310070 + L1MEc LINE L1 1472 2131 -4265 402 197 74 16 chr17 63128423 63128545 -22309935 + L1MEc LINE L1 2191 2319 -3896 1215 214 31 0 chr17 63128576 63128866 -22309614 + L1MEc LINE L1 2721 3019 -3196 1754 195 150 43 chr17 63128869 63129381 -22309099 + L1MD2 LINE L1 5780 6346 -13 922 189 0 24 chr17 63129382 63129546 -22308934 - FRAM SINE Alu -21 155 1 581 231 27 23 chr17 63129574 63129795 -22308685 + L1MEc LINE L1 3032 3253 -2962 860 243 75 18 chr17 63129816 63130203 -22308277 - L1MEc LINE L1 -5013 1383 975 2107 126 7 0 chr17 63130487 63130796 -22307684 - AluSq SINE Alu -2 311 1 1728 158 3 34 chr17 63132162 63132453 -22306027 - AluJb SINE Alu -30 282 1 49 66 0 0 chr17 63134231 63134322 -22304158 + AT_rich Low_complexity Low_complexity 1 91 0 241 229 49 0 chr17 63135237 63135298 -22303182 + MIR SINE MIR 85 148 -60 498 273 21 82 chr17 63136728 63136850 -22301630 + MIR SINE MIR 16 123 -139 2550 74 0 0 chr17 63136850 63137161 -22301319 - AluY SINE Alu 0 311 1 498 273 21 82 chr17 63137161 63137232 -22301248 + MIR SINE MIR 123 197 -65 1605 101 5 5 chr17 63137523 63137742 -22300738 + AluSx SINE Alu 1 219 -93 228 313 0 0 chr17 63137755 63137822 -22300658 + GA-rich Low_complexity Low_complexity 1 67 0 2362 75 0 28 chr17 63137894 63138214 -22300266 - AluY SINE Alu 0 311 1 22 70 0 0 chr17 63139935 63139978 -22298502 + AT_rich Low_complexity Low_complexity 1 43 0 7274 117 13 18 chr17 63140390 63141035 -22297445 - HSMAR2 DNA Mariner -1 1301 663 2228 103 6 6 chr17 63141035 63141346 -22297134 - AluY SINE Alu 0 311 1 7274 117 13 18 chr17 63141346 63141813 -22296667 - HSMAR2 DNA Mariner -639 663 195 242 0 0 0 chr17 63141809 63141837 -22296643 - HSMAR2 DNA Mariner -1273 29 2 * 945 190 6 23 chr17 63141929 63142103 -22296377 + FAM SINE Alu 1 171 -4 423 106 0 0 chr17 63145035 63145101 -22293379 + (TA)n Simple_repeat Simple_repeat 1 66 0 237 268 0 14 chr17 63145184 63145216 -22293264 + (TA)n Simple_repeat Simple_repeat 1 32 -38 2247 118 3 0 chr17 63145216 63145521 -22292959 + AluSc SINE Alu 1 306 -3 237 268 0 14 chr17 63145521 63145559 -22292921 + (TA)n Simple_repeat Simple_repeat 32 70 0 22 0 0 0 chr17 63146728 63146750 -22291730 + AT_rich Low_complexity Low_complexity 1 22 0 2237 117 7 0 chr17 63147335 63147635 -22290845 + AluSx SINE Alu 1 302 -10 306 0 0 0 chr17 63148146 63148180 -22290300 + (TA)n Simple_repeat Simple_repeat 2 35 0 204 67 0 0 chr17 63148718 63148748 -22289732 + (CAA)n Simple_repeat Simple_repeat 2 31 0 570 273 139 24 chr17 63149208 63149373 -22289107 - MER5A DNA MER1_type -2 187 4 731 179 0 54 chr17 63150004 63150188 -22288292 - L1MC5 LINE L1 -48 7913 7740 216 333 67 0 chr17 63150267 63150342 -22288138 - L2 LINE L2 -7 3306 3227 183 80 0 0 chr17 63150456 63150481 -22287999 + (A)n Simple_repeat Simple_repeat 1 25 0 377 322 72 41 chr17 63150484 63150698 -22287782 + L2 LINE L2 2799 3016 -297 233 228 263 9 chr17 63151290 63151404 -22287076 + L1ME LINE L1 5518 5660 -461 1619 197 7 10 chr17 63151607 63151912 -22286568 + AluJo SINE Alu 1 304 -8 485 148 0 23 chr17 63151925 63152013 -22286467 + L1MC1 LINE L1 6235 6320 -13 183 250 23 0 chr17 63152107 63152151 -22286329 + L2 LINE L2 3220 3264 -8 193 163 41 0 chr17 63152968 63153017 -22285463 + (TA)n Simple_repeat Simple_repeat 1 51 0 2097 136 0 0 chr17 63153107 63153394 -22285086 - AluSx SINE Alu -25 287 1 1021 128 6 67 chr17 63153657 63153836 -22284644 - AluJo SINE Alu -142 170 3 23 68 0 0 chr17 63154908 63154952 -22283528 + AT_rich Low_complexity Low_complexity 1 44 0 2395 46 0 0 chr17 63155015 63155332 -22283148 + AluY SINE Alu 1 317 0 26 0 0 0 chr17 63155543 63155569 -22282911 + AT_rich Low_complexity Low_complexity 1 26 0 229 196 22 0 chr17 63155836 63155882 -22282598 + (TG)n Simple_repeat Simple_repeat 2 48 0 421 279 117 45 chr17 63157300 63157359 -22281121 + L2 LINE L2 2351 2404 -910 2006 115 0 0 chr17 63157359 63157660 -22280820 - AluSx SINE Alu 0 316 16 2028 130 0 40 chr17 63157662 63157984 -22280496 - AluSx SINE Alu -3 309 1 421 279 117 45 chr17 63157984 63158210 -22280270 + L2 LINE L2 2404 2661 -653 2089 93 0 55 chr17 63158242 63158554 -22279926 + AluSg SINE Alu 1 295 -15 645 131 41 8 chr17 63160009 63160131 -22278349 - L1MB7 LINE L1 -21 6163 6038 543 267 17 33 chr17 63160127 63160307 -22278173 - L1MC5 LINE L1 -18 7943 7767 * 334 273 39 39 chr17 63160436 63160564 -22277916 - MLT1L LTR MaLR -339 276 149 200 299 130 0 chr17 63161136 63161213 -22277267 + L2 LINE L2 3227 3313 0 1557 120 0 5 chr17 63161374 63161591 -22276889 - AluSc SINE Alu -11 298 83 2116 128 0 13 chr17 63163868 63164172 -22274308 - AluSx SINE Alu -12 300 1 1968 141 3 0 chr17 63165680 63165993 -22272487 + AluSx SINE Alu 1 314 0 2564 64 0 6 chr17 63167297 63167611 -22270869 - AluSx SINE Alu 0 312 1 2201 89 4 0 chr17 63168428 63168734 -22269746 - AluSg SINE Alu 0 307 1 3067 210 105 43 chr17 63169657 63170679 -22267801 - L1ME3 LINE L1 -1 6161 5203 2300 107 0 7 chr17 63170679 63170987 -22267493 - AluSx SINE Alu -6 306 1 3067 210 105 43 chr17 63170987 63171087 -22267393 - L1ME3 LINE L1 -959 5203 5111 1775 191 10 0 chr17 63171087 63171381 -22267099 + AluJb SINE Alu 1 297 -15 3067 210 105 43 chr17 63171381 63171679 -22266801 - L1ME3 LINE L1 -1051 5111 4654 3954 194 115 31 chr17 63171706 63172345 -22266135 + Charlie1a DNA MER1_type 17 780 -1981 2155 100 17 3 chr17 63172345 63172634 -22265846 + AluSp SINE Alu 1 293 -20 3954 194 115 31 chr17 63172634 63173049 -22265431 + Charlie1a DNA MER1_type 780 1159 -296 287 210 168 0 chr17 63173084 63173230 -22265250 + Charlie1 DNA MER1_type 2523 2705 -56 2024 139 10 0 chr17 63173252 63173546 -22264934 - AluSx SINE Alu -15 297 1 261 0 0 0 chr17 63173624 63173653 -22264827 + (CA)n Simple_repeat Simple_repeat 2 30 0 415 179 47 28 chr17 63173668 63173774 -22264706 - L1ME3 LINE L1 -1510 4636 4529 978 107 7 14 chr17 63173781 63173921 -22264559 - AluSg/x SINE Alu -18 294 156 235 232 136 35 chr17 63173935 63174133 -22264347 - L1ME3 LINE L1 -1631 4515 4298 1249 172 0 28 chr17 63174133 63174348 -22264132 + AluJb SINE Alu 85 293 -19 842 241 111 0 chr17 63174348 63174601 -22263879 - L1ME3 LINE L1 -1837 4309 4029 445 265 65 71 chr17 63174611 63174935 -22263545 + L1MEc LINE L1 1277 1476 -4908 2412 66 30 0 chr17 63174947 63175248 -22263232 - AluY SINE Alu -1 310 1 198 241 51 63 chr17 63175433 63175512 -22262968 - MIR SINE MIR -6 256 179 2277 96 3 0 chr17 63176623 63176916 -22261564 + AluY SINE Alu 1 294 -17 247 230 81 40 chr17 63178374 63178448 -22260032 + L2 LINE L2 3192 3268 -4 319 282 12 0 chr17 63178661 63178746 -22259734 - MIR SINE MIR -126 136 51 309 305 42 17 chr17 63180191 63180309 -22258171 - MIR SINE MIR -41 221 101 14892 170 24 38 chr17 63180551 63181570 -22256910 + L1MA4 LINE L1 3343 4375 -3215 2322 82 31 0 chr17 63181570 63181864 -22256616 + AluSq SINE Alu 1 303 -10 14892 170 24 38 chr17 63181864 63183236 -22255244 + L1MA4 LINE L1 4375 5764 -1826 2552 60 0 0 chr17 63183236 63183535 -22254945 + AluY SINE Alu 1 299 -12 14892 170 24 38 chr17 63183535 63185197 -22253283 + L1MA4 LINE L1 5764 7395 -195 572 147 10 10 chr17 63185197 63185299 -22253181 + U13 snRNA snRNA 1 102 -2 14892 170 24 38 chr17 63185299 63185477 -22253003 + L1MA4 LINE L1 7395 7574 -16 463 196 41 0 chr17 63185491 63185588 -22252892 + L1MC3 LINE L1 7684 7784 -1 21 0 0 0 chr17 63185588 63185609 -22252871 + AT_rich Low_complexity Low_complexity 1 21 0 461 164 97 109 chr17 63185664 63185829 -22252651 + MLT2C1 LTR ERVL 235 397 0 1154 236 44 7 chr17 63186041 63186312 -22252168 + MLT1D-int LTR MaLR 605 885 -486 1478 201 45 126 chr17 63186417 63186948 -22251532 + MLT1D-int LTR MaLR 883 1370 -1 713 274 100 35 chr17 63186960 63187388 -22251092 + MLT1D LTR MaLR 12 497 -8 443 184 112 56 chr17 63187453 63187578 -22250902 - L1MC/D LINE L1 -600 5711 5580 411 171 0 0 chr17 63187638 63187720 -22250760 - L1MC/D LINE L1 -942 5273 5192 1678 173 0 7 chr17 63187774 63188051 -22250429 - AluJo SINE Alu -20 292 18 494 225 50 0 chr17 63188058 63188178 -22250302 - L1MC/D LINE L1 -1039 5176 5051 1607 214 181 20 chr17 63188182 63188819 -22249661 - L1MC/D LINE L1 -1234 4981 4243 1229 279 58 0 chr17 63188848 63189196 -22249284 - L1MC/D LINE L1 -5993 403 36 401 321 65 0 chr17 63189211 63189379 -22249101 - MIR SINE MIR -16 246 68 757 190 54 11 chr17 63189390 63189574 -22248906 + L1MB7 LINE L1 5981 6172 -12 255 148 33 16 chr17 63189628 63189689 -22248791 + MER53 DNA DNA 1 62 -127 242 194 243 19 chr17 63189651 63189754 -22248726 - MER53 DNA DNA -13 176 51 * 1547 250 71 18 chr17 63190805 63191407 -22247073 + L1MC4 LINE L1 6887 7699 -343 1967 94 30 27 chr17 63191407 63191704 -22246776 + AluSc SINE Alu 1 298 -11 1547 250 71 18 chr17 63191704 63191932 -22246548 + L1MC4 LINE L1 7699 7913 -129 487 152 76 9 chr17 63192585 63192690 -22245790 + L1MB3 LINE L1 6065 6176 -7 3899 152 4 18 chr17 63192708 63193066 -22245414 + L1PA13 LINE L1 4634 4995 -1151 2195 114 0 0 chr17 63193066 63193355 -22245125 + AluSq SINE Alu 10 298 -15 3899 152 4 18 chr17 63193355 63193731 -22244749 + L1PA13 LINE L1 4995 5358 -788 4675 125 16 4 chr17 63193733 63194469 -22244011 + L1PA13 LINE L1 5408 6152 -11 2282 104 0 0 chr17 63194471 63194770 -22243710 + AluSx SINE Alu 1 299 -13 29 0 0 0 chr17 63194771 63194800 -22243680 + AT_rich Low_complexity Low_complexity 1 29 0 2202 113 13 7 chr17 63195019 63195329 -22243151 + AluSx SINE Alu 1 312 0 309 275 58 36 chr17 63195896 63196034 -22242446 + L1M4 LINE L1 4232 4372 -1774 389 271 55 18 chr17 63196262 63196480 -22242000 - L1MC5 LINE L1 -47 7914 7689 453 146 124 22 chr17 63196511 63196600 -22241880 + FLAM_C SINE Alu 32 129 -14 280 259 95 9 chr17 63196658 63196774 -22241706 - L1MC5 LINE L1 -333 7628 7503 748 220 92 72 chr17 63196837 63197296 -22241184 - L1MC5 LINE L1 -167 7794 7327 1023 138 85 0 chr17 63197318 63197506 -22240974 + L1MA4 LINE L1 6091 6294 -6 1711 132 7 66 chr17 63197515 63197819 -22240661 + AluJo SINE Alu 1 286 -26 2243 123 0 0 chr17 63197915 63198216 -22240264 + AluSg SINE Alu 1 301 -9 2071 104 0 64 chr17 63198666 63198994 -22239486 + AluSg SINE Alu 1 307 -3 248 222 69 69 chr17 63198995 63199067 -22239413 + MIR SINE MIR 178 249 -13 784 246 18 0 chr17 63199113 63199284 -22239196 + MER63A DNA MER1_type 9 182 -28 207 250 0 0 chr17 63199326 63199394 -22239086 + (TATG)n Simple_repeat Simple_repeat 3 70 0 1810 178 0 3 chr17 63200159 63200462 -22238018 - AluJo SINE Alu -10 302 1 1447 231 181 68 chr17 63200662 63200967 -22237513 - L1MDa LINE L1 -1043 5497 5228 2298 71 7 0 chr17 63200967 63201250 -22237230 - AluY SINE Alu -25 286 2 2029 141 7 0 chr17 63201251 63201571 -22236909 - AluSx SINE Alu 0 312 1 1447 231 181 68 chr17 63201571 63202134 -22236346 - L1MDa LINE L1 -1311 5229 4528 3046 246 156 25 chr17 63202172 63203961 -22234519 - L1MDa LINE L1 -2078 4462 2416 260 241 11 11 chr17 63204072 63204159 -22234321 - L1MDa LINE L1 -4136 2404 2318 308 272 37 0 chr17 63204174 63204255 -22234225 - L1MDa LINE L1 -5981 549 466 32 0 0 0 chr17 63204491 63204523 -22233957 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr17 63204628 63204656 -22233824 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1948 104 3 10 chr17 63204658 63204946 -22233534 - AluSx SINE Alu -26 286 1 31 0 0 0 chr17 63205516 63205547 -22232933 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr17 63207024 63207048 -22231432 + AT_rich Low_complexity Low_complexity 1 24 0 1455 226 145 19 chr17 63207268 63207636 -22230844 - L1ME1 LINE L1 -5 6161 5841 2148 125 3 7 chr17 63207636 63207941 -22230539 - AluSx SINE Alu -8 304 1 1455 226 145 19 chr17 63207941 63208329 -22230151 - L1ME1 LINE L1 -325 5841 5503 455 0 18 0 chr17 63208329 63208384 -22230096 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 1455 226 145 19 chr17 63208384 63208896 -22229584 - L1ME1 LINE L1 -663 5503 4644 345 74 102 5 chr17 63208896 63209072 -22229408 + AluSc SINE Alu 1 289 -10 229 206 15 15 chr17 63209577 63209645 -22228835 + L1ME3A LINE L1 6095 6162 -8 7508 27 6 1 chr17 63209895 63211228 -22227252 + L1PA4 LINE L1 4819 6155 0 24 77 0 0 chr17 63211702 63211754 -22226726 + AT_rich Low_complexity Low_complexity 1 52 0 213 39 0 0 chr17 63211962 63211988 -22226492 + (CATTG)n Simple_repeat Simple_repeat 2 27 0 1412 147 5 27 chr17 63211988 63212212 -22226268 - AluSx SINE Alu -93 219 1 493 210 18 11 chr17 63212846 63213068 -22225412 + ORSL DNA AcHobo 1 274 -1 2047 117 28 0 chr17 63213906 63214196 -22224284 - AluSx SINE Alu -14 298 1 2523 64 0 6 chr17 63214318 63214630 -22223850 - AluY SINE Alu -1 310 1 195 359 13 0 chr17 63214780 63214858 -22223622 - L2 LINE L2 -6 3266 3188 1998 159 0 0 chr17 63214997 63215299 -22223181 - AluJb SINE Alu -10 302 1 322 152 0 152 chr17 63215310 63215402 -22223078 - MIR SINE MIR -101 161 84 2081 140 0 7 chr17 63215513 63215821 -22222659 + AluSx SINE Alu 1 306 -6 2181 107 3 7 chr17 63216333 63216622 -22221858 + AluSx SINE Alu 1 288 -24 4097 44 0 4 chr17 63217017 63217519 -22220961 + L1PA3 LINE L1 5653 6152 -3 26 64 0 0 chr17 63217524 63217571 -22220909 + AT_rich Low_complexity Low_complexity 1 47 0 1394 190 27 37 chr17 63217646 63217946 -22220534 - AluJo SINE Alu -15 297 1 25 51 0 0 chr17 63219160 63219199 -22219281 + AT_rich Low_complexity Low_complexity 1 39 0 227 266 119 18 chr17 63219241 63219350 -22219130 - Charlie4 DNA MER1_type -1691 270 151 186 163 0 0 chr17 63219524 63219538 -22218942 + GA-rich Low_complexity Low_complexity 2 15 -29 2200 98 10 13 chr17 63219538 63219845 -22218635 + AluSc SINE Alu 3 308 -1 186 163 0 0 chr17 63219845 63219873 -22218607 + GA-rich Low_complexity Low_complexity 14 44 0 195 417 49 14 chr17 63219968 63220112 -22218368 - L2 LINE L2 -9 3263 3115 1794 143 16 101 chr17 63220903 63221298 -22217182 + MER46B DNA MER2_type 1 236 0 291 227 58 140 chr17 63221328 63221535 -22216945 + L1MC5 LINE L1 7000 7189 -772 281 345 0 0 chr17 63221631 63221749 -22216731 + L1MC4a LINE L1 7250 7354 -454 561 184 0 0 chr17 63221902 63221989 -22216491 + FLAM_C SINE Alu 32 118 -25 30 27 0 0 chr17 63221991 63222028 -22216452 + AT_rich Low_complexity Low_complexity 1 37 0 1808 248 83 9 chr17 63223902 63224544 -22213936 - L1MEc LINE L1 -2896 3644 2956 2429 72 0 0 chr17 63224669 63224959 -22213521 + AluSg SINE Alu 1 290 -20 539 164 44 69 chr17 63225181 63225301 -22213179 - L1MEc LINE L1 -3723 2817 2696 4507 119 41 8 chr17 63225301 63225487 -22212993 - L1PA16 LINE L1 0 6166 5988 2482 15 0 0 chr17 63225487 63225761 -22212719 - AluYa5 SINE Alu -6 305 32 4507 119 41 8 chr17 63225761 63226201 -22212279 - L1PA16 LINE L1 -178 5988 5564 2206 92 0 0 chr17 63226201 63226535 -22211945 - AluY SINE Alu 0 334 1 4507 119 41 8 chr17 63226535 63227013 -22211467 - L1PA16 LINE L1 -602 5564 5000 539 164 44 69 chr17 63227013 63227051 -22211429 - L1MEc LINE L1 -3844 2696 2663 346 295 104 12 chr17 63227080 63227253 -22211227 - L1MEc LINE L1 -3980 2562 2374 228 152 22 0 chr17 63227256 63227302 -22211178 - L1MEc LINE L1 -4320 2401 2355 2272 130 22 40 chr17 63227453 63227501 -22210979 + L1M2 LINE L1 1577 1624 -5225 2214 95 3 10 chr17 63227501 63227795 -22210685 + AluSc SINE Alu 1 292 -17 2272 130 22 40 chr17 63227795 63228133 -22210347 + L1M2 LINE L1 1624 1955 -4894 2393 80 0 3 chr17 63228133 63228432 -22210048 + AluY SINE Alu 3 300 -11 2272 130 22 40 chr17 63228432 63228543 -22209937 + L1M2 LINE L1 1955 2066 -4783 1451 162 29 0 chr17 63228543 63228815 -22209665 + L1MA4A LINE L1 6013 6292 -11 3608 168 15 67 chr17 63228821 63229231 -22209249 + L1MB4 LINE L1 5357 5700 -480 2004 152 3 0 chr17 63229231 63229528 -22208952 + AluSx SINE Alu 1 298 -14 3608 168 15 67 chr17 63229528 63229978 -22208502 + L1MB4 LINE L1 5700 6172 -8 620 211 135 14 chr17 63229936 63230426 -22208054 - L1M4 LINE L1 -356 5818 5135 * 1207 261 62 7 chr17 63230436 63230853 -22207627 - L1MEc LINE L1 -4310 2230 1791 2292 212 54 52 chr17 63230855 63231141 -22207339 + L1MD2 LINE L1 5528 5812 -547 2463 81 0 3 chr17 63231141 63231449 -22207031 + AluY SINE Alu 1 307 -4 2292 212 54 52 chr17 63231449 63231850 -22206630 + L1MD2 LINE L1 5812 6216 -143 375 220 59 75 chr17 63232011 63232142 -22206338 - L1MC/D LINE L1 -2312 5496 5367 1845 163 111 49 chr17 63232142 63232548 -22205932 - Tigger2a DNA MER2_type -1 433 3 375 220 59 75 chr17 63232548 63232602 -22205878 - L1MC/D LINE L1 -2441 5367 5314 23 0 0 0 chr17 63233706 63233729 -22204751 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr17 63234841 63234885 -22203595 + AT_rich Low_complexity Low_complexity 1 44 0 2145 127 0 16 chr17 63235389 63235526 -22202954 + AluSx SINE Alu 1 139 -173 2051 130 7 3 chr17 63235526 63235834 -22202646 + AluSx SINE Alu 1 309 -3 2145 127 0 16 chr17 63235834 63236012 -22202468 + AluSx SINE Alu 139 311 -1 22 35 0 0 chr17 63236135 63236164 -22202316 + AT_rich Low_complexity Low_complexity 1 29 0 441 310 42 7 chr17 63238035 63238177 -22200303 - MIR SINE MIR -114 148 2 2110 203 50 63 chr17 63240886 63241506 -22196974 + LTR9 LTR ERV1 1 612 0 382 200 89 15 chr17 63241690 63241825 -22196655 - L1MC/D LINE L1 -2180 3966 3822 477 290 68 11 chr17 63242004 63242283 -22196197 - L1MC/D LINE L1 -2358 3788 3494 1438 202 0 4 chr17 63242322 63242574 -22195906 - AluJb SINE Alu -61 251 1 2267 85 0 0 chr17 63242680 63243000 -22195480 - AluSg SINE Alu 0 320 1 336 160 67 2 chr17 63243392 63243621 -22194859 + AluJo SINE Alu 2 296 -6 198 0 0 0 chr17 63245863 63245885 -22192595 + (CAA)n Simple_repeat Simple_repeat 2 23 0 2009 141 0 13 chr17 63245893 63246197 -22192283 - AluSx SINE Alu -12 300 1 239 228 33 87 chr17 63246375 63246467 -22192013 + L1MC4a LINE L1 5845 5931 -1877 13334 206 39 39 chr17 63246490 63246918 -22191562 + L1PB4 LINE L1 31 457 -6401 2342 121 13 0 chr17 63246918 63247233 -22191247 - 7SLRNA srpRNA srpRNA -1 319 1 13334 206 39 39 chr17 63247233 63247328 -22191152 + L1PB4 LINE L1 457 550 -6308 2171 126 0 0 chr17 63247328 63247621 -22190859 + AluSg SINE Alu 1 293 -17 13334 206 39 39 chr17 63247621 63249085 -22189395 + L1PB4 LINE L1 550 2012 -4846 1567 156 0 105 chr17 63249085 63249424 -22189056 + AluJo SINE Alu 1 306 0 13334 206 39 39 chr17 63249424 63250787 -22187693 + L1PB4 LINE L1 2012 3373 -3485 1933 143 20 0 chr17 63250787 63251081 -22187399 - AluSx SINE Alu -12 300 1 13334 206 39 39 chr17 63251081 63253053 -22185427 + L1PB4 LINE L1 3373 5343 -1515 225 0 0 0 chr17 63253053 63253078 -22185402 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 13334 206 39 39 chr17 63253078 63253216 -22185264 + L1PB4 LINE L1 5343 5479 -1379 2075 149 0 7 chr17 63253216 63253524 -22184956 + AluSx SINE Alu 1 306 -6 13334 206 39 39 chr17 63253524 63254233 -22184247 + L1PB4 LINE L1 5479 6202 -656 2205 108 14 0 chr17 63254233 63254529 -22183951 + AluSp SINE Alu 1 300 -13 13334 206 39 39 chr17 63254529 63255187 -22183293 + L1PB4 LINE L1 6202 6858 0 2387 96 3 0 chr17 63256367 63256670 -22181810 - AluSx SINE Alu -8 304 1 21 0 0 0 chr17 63258322 63258343 -22180137 + AT_rich Low_complexity Low_complexity 1 21 0 772 160 69 69 chr17 63259174 63259362 -22179118 + L1M4 LINE L1 4838 5025 -1121 42938 31 21 2 chr17 63259367 63265401 -22173079 + L1PA2 LINE L1 5 6154 -1 711 152 149 73 chr17 63265396 63265568 -22172912 + L1M4 LINE L1 5016 5173 -1007 * 2513 54 0 0 chr17 63265568 63265890 -22172590 + AluY SINE Alu 1 322 0 711 152 149 73 chr17 63265890 63266104 -22172376 + L1M4 LINE L1 5173 5437 -743 581 192 85 0 chr17 63266124 63266254 -22172226 + L1M4 LINE L1 5646 5786 -392 2181 104 0 25 chr17 63266254 63266571 -22171909 + AluSc SINE Alu 1 309 0 292 247 170 16 chr17 63268317 63268499 -22169981 - L1ME3A LINE L1 -12 6158 5949 2239 118 0 0 chr17 63268532 63268838 -22169642 + AluSx SINE Alu 1 306 -6 276 149 0 0 chr17 63269621 63269668 -22168812 + (TA)n Simple_repeat Simple_repeat 1 47 0 346 236 11 0 chr17 63270816 63270905 -22167575 + L1MC5 LINE L1 7701 7790 -171 1755 158 7 17 chr17 63272470 63272761 -22165719 + AluJo SINE Alu 1 288 -24 769 178 0 15 chr17 63272839 63272974 -22165506 + FLAM_A SINE Alu 1 133 0 247 278 118 7 chr17 63273831 63273975 -22164505 + L1MCc LINE L1 1227 1386 -5037 225 229 0 73 chr17 63274004 63274100 -22164380 - L1MC4 LINE L1 -1340 6702 6614 * 315 172 69 35 chr17 63274015 63274102 -22164378 + L1MC4 LINE L1 6614 6703 -1339 242 154 0 19 chr17 63274137 63274189 -22164291 + L1MC4 LINE L1 6652 6702 -1340 218 329 13 0 chr17 63274199 63274278 -22164202 + (TATATG)n Simple_repeat Simple_repeat 1 80 0 282 153 153 0 chr17 63274286 63274358 -22164122 + L1MC4 LINE L1 6621 6703 -1339 308 195 49 12 chr17 63274388 63274470 -22164010 + L1MC4 LINE L1 6619 6703 -1339 301 183 0 24 chr17 63274506 63274588 -22163892 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 480 209 217 4 chr17 63274643 63274892 -22163588 + L1MCc LINE L1 2972 3273 -3668 301 293 147 8 chr17 63274889 63275155 -22163325 + L1MCc LINE L1 4349 4651 -2290 * 206 118 0 0 chr17 63275221 63275255 -22163225 + (A)n Simple_repeat Simple_repeat 1 34 0 1535 156 48 22 chr17 63275388 63275657 -22162823 + AluJb SINE Alu 5 280 -32 232 299 0 10 chr17 63275864 63275961 -22162519 + L1ME4a LINE L1 3417 3512 -2634 268 308 96 20 chr17 63276018 63276216 -22162264 - L1M4 LINE L1 -1181 4965 4753 323 303 9 28 chr17 63277469 63277578 -22160902 + MIR3 SINE MIR 93 199 -9 503 268 57 19 chr17 63277780 63277989 -22160491 + MER112 DNA MER1_type 30 246 -14 1118 246 125 44 chr17 63380290 63380770 -22057710 + L1ME4a LINE L1 5337 5855 -315 1430 176 0 101 chr17 63382139 63382475 -22056005 + AluJo SINE Alu 1 302 0 24 0 0 0 chr17 63382477 63382501 -22055979 + AT_rich Low_complexity Low_complexity 1 24 0 401 259 80 37 chr17 63383662 63383824 -22054656 + MIR3 SINE MIR 40 208 0 356 289 29 29 chr17 63383859 63383963 -22054517 + Charlie1 DNA MER1_type 1 104 -2657 676 111 0 0 chr17 63383964 63384063 -22054417 + AluJ/FLAM SINE Alu 1 99 -213 474 240 10 0 chr17 63384170 63384274 -22054206 + L1MC4a LINE L1 7242 7346 -462 444 194 29 10 chr17 63384281 63384384 -22054096 + HAL1b LINE L1 586 690 -658 227 212 82 35 chr17 63384394 63384479 -22054001 + L1ME3A LINE L1 6082 6170 0 276 169 270 0 chr17 63384485 63384574 -22053906 + L1ME4a LINE L1 6008 6120 -1 589 217 174 6 chr17 63384701 63384862 -22053618 + MER3 DNA MER1_type 1 188 -21 738 180 0 0 chr17 63385213 63385335 -22053145 + FLAM_C SINE Alu 1 122 -11 6971 87 13 14 chr17 63385877 63386046 -22052434 + L1MA3 LINE L1 5304 5472 -833 2309 94 0 0 chr17 63386046 63386344 -22052136 + AluSx SINE Alu 1 298 -14 6971 87 13 14 chr17 63386344 63387177 -22051303 + L1MA3 LINE L1 5472 6305 0 231 267 22 11 chr17 63387277 63387367 -22051113 + L1 LINE L1 4946 5036 -1110 * 265 315 0 0 chr17 63387363 63387436 -22051044 + HAL1 LINE L1 1 73 -2434 603 328 100 4 chr17 63387451 63387701 -22050779 + Charlie8 DNA MER1_type 3 276 -2141 2734 124 68 48 chr17 63387797 63387810 -22050670 - MER51A LTR ERV1 -117 517 506 2264 122 0 0 chr17 63387810 63388121 -22050359 + AluSx SINE Alu 1 311 -1 2734 124 68 48 chr17 63388121 63388627 -22049853 - MER51A LTR ERV1 -128 506 1 1207 155 0 10 chr17 63388662 63388855 -22049625 - AluJo SINE Alu -4 308 118 485 234 66 66 chr17 63388865 63389032 -22049448 - FAM SINE Alu -8 167 1 1837 142 7 17 chr17 63390184 63390480 -22048000 - AluJb SINE Alu -19 293 1 404 238 75 20 chr17 63390624 63390771 -22047709 - L2 LINE L2 0 3313 3159 24 0 0 0 chr17 63390776 63390800 -22047680 + AT_rich Low_complexity Low_complexity 1 24 0 772 235 48 0 chr17 63390955 63391142 -22047338 + MIR SINE MIR 1 196 -66 264 161 16 81 chr17 63391232 63391294 -22047186 + MIR SINE MIR 189 246 -16 216 238 48 0 chr17 63391361 63391424 -22047056 + GA-rich Low_complexity Low_complexity 3 68 0 512 47 0 0 chr17 63392347 63392411 -22046069 - AluY SINE Alu -234 77 14 1633 55 15 0 chr17 63392411 63392658 -22045822 + AluY SINE Alu 82 331 0 24 0 0 0 chr17 63392828 63392852 -22045628 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr17 63393356 63393385 -22045095 + AT_rich Low_complexity Low_complexity 1 29 0 1941 125 20 10 chr17 63394140 63394444 -22044036 + AluSx SINE Alu 1 307 -5 824 163 0 0 chr17 63394558 63394681 -22043799 + FLAM_C SINE Alu 1 123 -10 4335 137 56 14 chr17 63394715 63395787 -22042693 + L1MA5 LINE L1 4557 5665 -635 1376 183 4 16 chr17 63395787 63396044 -22042436 - AluJo SINE Alu -58 254 1 3484 134 15 21 chr17 63396048 63396659 -22041821 + L1MA5 LINE L1 5693 6299 -1 189 213 0 0 chr17 63396765 63396812 -22041668 + (CTA)n Simple_repeat Simple_repeat 2 48 0 692 253 50 40 chr17 63396814 63397012 -22041468 - MIR SINE MIR -22 240 41 2601 164 28 42 chr17 63397012 63397495 -22040985 + L1MA9 LINE L1 5724 6199 -113 2027 165 72 10 chr17 63397495 63397896 -22040584 + MSTB LTR MaLR 1 426 0 2601 164 28 42 chr17 63397896 63397979 -22040501 + L1MA9 LINE L1 6199 6282 -30 1856 166 3 16 chr17 63397985 63398292 -22040188 - AluJo SINE Alu -9 303 1 217 179 0 0 chr17 63398316 63398355 -22040125 - MIR SINE MIR -212 50 12 1590 208 0 16 chr17 63398366 63398674 -22039806 + AluJo SINE Alu 1 303 -9 503 259 86 0 chr17 63398858 63398997 -22039483 + MIR SINE MIR 41 191 -71 329 309 184 0 chr17 63398997 63399165 -22039315 - L2 LINE L2 -3 3310 3112 1318 165 39 40 chr17 63399381 63399965 -22038515 - Charlie1 DNA MER1_type -561 2200 1548 1516 62 0 0 chr17 63400006 63400184 -22038296 + AluY SINE Alu 43 220 -91 269 243 191 7 chr17 63400767 63400903 -22037577 + L1MEc LINE L1 38 198 -6198 532 249 102 28 chr17 63400918 63401243 -22037237 + L1MEc LINE L1 1028 1376 -5020 360 0 0 0 chr17 63401251 63401291 -22037189 + (CA)n Simple_repeat Simple_repeat 2 41 0 1933 114 54 4 chr17 63401328 63401608 -22036872 - AluSq SINE Alu -19 294 1 339 268 36 1 chr17 63401629 63401753 -22036727 + L1ME3A LINE L1 412 1517 -810 4878 161 48 19 chr17 63401755 63402422 -22036058 + L1MB4 LINE L1 4588 5234 -946 6911 161 12 39 chr17 63402422 63402497 -22035983 + L1PA13 LINE L1 4020 4095 -2068 2439 90 0 0 chr17 63402497 63402808 -22035672 + AluY SINE Alu 1 311 0 6911 161 12 39 chr17 63402808 63403116 -22035364 + L1PA13 LINE L1 4095 4410 -1753 423 0 0 0 chr17 63403116 63403163 -22035317 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6911 161 12 39 chr17 63403163 63404937 -22033543 + L1PA13 LINE L1 4410 6163 0 1833 163 3 3 chr17 63404940 63405228 -22033252 + AluSx SINE Alu 1 288 -24 4878 161 48 19 chr17 63405228 63406065 -22032415 + L1MB4 LINE L1 5235 6179 -1 5601 226 115 32 chr17 63406106 63407422 -22031058 + L1ME3A LINE L1 1637 2843 -3303 2326 95 0 3 chr17 63407422 63407727 -22030753 - AluSq SINE Alu -9 304 1 5601 226 115 32 chr17 63407727 63408962 -22029518 + L1ME3A LINE L1 2843 4369 -1777 2108 139 12 0 chr17 63408960 63409297 -22029183 - L1MB3 LINE L1 -258 5925 5585 * 1898 223 85 28 chr17 63409313 63409843 -22028637 + L1MC4 LINE L1 6525 7084 -958 1905 236 99 14 chr17 63409865 63410459 -22028021 + L1MC4 LINE L1 7261 7905 -137 2102 130 0 3 chr17 63410881 63411180 -22027300 + AluSx SINE Alu 1 298 -14 228 125 0 0 chr17 63411332 63411364 -22027116 - MER58A DNA MER1_type -3 221 190 963 209 36 10 chr17 63411410 63411606 -22026874 - MER58A DNA MER1_type -23 201 1 211 125 62 31 chr17 63411738 63411802 -22026678 + (TA)n Simple_repeat Simple_repeat 1 66 0 1174 218 118 72 chr17 63411994 63412452 -22026028 + MLT1H LTR MaLR 17 495 -54 21 57 0 0 chr17 63412641 63412676 -22025804 + AT_rich Low_complexity Low_complexity 1 35 0 422 260 60 7 chr17 63412732 63412882 -22025598 + HAL1 LINE L1 1933 2090 -417 329 255 60 50 chr17 63412968 63413168 -22025312 + HAL1 LINE L1 2265 2466 -41 371 364 75 13 chr17 63413200 63413428 -22025052 + L1ME3A LINE L1 4802 5043 -1103 2031 128 3 7 chr17 63413732 63414030 -22024450 + AluSx SINE Alu 1 297 -15 2416 92 0 0 chr17 63414132 63414435 -22024045 + AluSx SINE Alu 1 303 -9 731 303 51 28 chr17 63414564 63414957 -22023523 - L1M4 LINE L1 -1104 5042 4641 839 196 35 79 chr17 63415025 63415254 -22023226 + MER20 DNA MER1_type 1 219 0 2073 194 127 82 chr17 63415531 63415573 -22022907 + L1ME3A LINE L1 5285 5324 -846 2063 142 3 0 chr17 63415573 63415875 -22022605 + AluSx SINE Alu 1 303 -9 2073 194 127 82 chr17 63415875 63416663 -22021817 + L1ME3A LINE L1 5324 6150 -20 962 171 10 16 chr17 63416778 63416971 -22021509 + L1ME1 LINE L1 4840 5031 -1115 2881 203 54 49 chr17 63416983 63417180 -22021300 + L1ME1 LINE L1 5254 5449 -717 1336 213 27 30 chr17 63417180 63417476 -22021004 + AluJb SINE Alu 1 295 -17 2881 203 54 49 chr17 63417476 63417611 -22020869 + L1ME1 LINE L1 5449 5582 -584 2174 113 13 0 chr17 63417611 63417911 -22020569 + AluSx SINE Alu 1 304 -8 2881 203 54 49 chr17 63417911 63418369 -22020111 + L1ME1 LINE L1 5582 6049 -117 434 200 28 76 chr17 63418394 63418482 -22019998 + L1MA10 LINE L1 6190 6270 -64 2147 129 0 3 chr17 63418482 63418784 -22019696 + AluSx SINE Alu 1 301 -11 434 200 28 76 chr17 63418784 63418840 -22019640 + L1MA10 LINE L1 6270 6327 -7 578 352 76 17 chr17 63418902 63419308 -22019172 - L2 LINE L2 0 3313 2884 450 289 50 96 chr17 63419328 63419546 -22018934 + MLT1L LTR MaLR 1 208 -407 29 0 0 0 chr17 63419728 63419757 -22018723 + AT_rich Low_complexity Low_complexity 1 29 0 479 276 0 0 chr17 63420483 63420581 -22017899 + MER81 DNA DNA 17 114 0 2143 130 0 0 chr17 63420628 63420927 -22017553 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr17 63421371 63421396 -22017084 + AT_rich Low_complexity Low_complexity 1 25 0 2344 88 3 0 chr17 63421562 63421859 -22016621 - AluSp SINE Alu -15 298 1 183 80 0 0 chr17 63421915 63421940 -22016540 + (CATA)n Simple_repeat Simple_repeat 2 26 0 820 216 66 0 chr17 63422094 63422261 -22016219 + FRAM SINE Alu 1 171 -5 1104 140 34 11 chr17 63422557 63422735 -22015745 - AluJb SINE Alu -45 267 86 746 254 64 50 chr17 63423414 63423573 -22014907 + L1MB8 LINE L1 5532 5687 -491 2124 110 3 0 chr17 63423573 63423864 -22014616 + AluSx SINE Alu 9 300 -12 746 254 64 50 chr17 63423864 63424083 -22014397 + L1MB8 LINE L1 5687 5888 -290 434 278 173 12 chr17 63424910 63425072 -22013408 + MIR SINE MIR 10 197 -65 223 119 24 24 chr17 63425434 63425476 -22013004 + L2 LINE L2 3263 3304 -9 358 288 216 7 chr17 63425479 63425632 -22012848 + MIR SINE MIR 2 186 -76 218 205 0 0 chr17 63426026 63426065 -22012415 + MIR3 SINE MIR 165 203 -5 244 306 59 29 chr17 63427597 63427767 -22010713 + L1ME LINE L1 5595 5769 -352 2589 30 0 0 chr17 63428038 63428333 -22010147 + AluY SINE Alu 1 295 -16 239 182 152 0 chr17 63429105 63429171 -22009309 - MIR SINE MIR -68 194 119 700 112 0 0 chr17 63429269 63429367 -22009113 + AluS SINE Alu 1 98 -215 1932 112 7 7 chr17 63429467 63429743 -22008737 - AluSx SINE Alu -36 276 1 4426 107 19 10 chr17 63429829 63430504 -22007976 - L1PA14 LINE L1 0 6161 5481 22 0 0 0 chr17 63430504 63430526 -22007954 + AT_rich Low_complexity Low_complexity 1 22 0 2122 115 16 13 chr17 63430530 63430835 -22007645 + AluSg SINE Alu 3 308 -2 2366 68 0 3 chr17 63430835 63431130 -22007350 + AluY SINE Alu 1 294 -17 332 161 0 0 chr17 63431132 63431188 -22007292 - U6 snRNA snRNA -51 56 1 1181 116 12 76 chr17 63431191 63431356 -22007124 - L1PA14 LINE L1 -672 5489 5315 2064 110 0 39 chr17 63431356 63431666 -22006814 - AluSg SINE Alu -12 298 1 1181 116 12 76 chr17 63431666 63431694 -22006786 - L1PA14 LINE L1 -846 5315 5287 2166 114 10 0 chr17 63431694 63431991 -22006489 - AluSp SINE Alu -13 300 1 1181 116 12 76 chr17 63431991 63432047 -22006433 - L1PA14 LINE L1 -874 5287 5255 4245 169 4 0 chr17 63432073 63432815 -22005665 + L1P LINE L1 4499 5243 -903 2507 67 0 0 chr17 63432920 63433218 -22005262 - AluY SINE Alu -13 298 1 307 350 32 8 chr17 63433361 63433484 -22004996 - L2 LINE L2 -218 3054 2929 2320 58 10 7 chr17 63433606 63433900 -22004580 - AluY SINE Alu -16 295 1 1440 202 52 0 chr17 63433904 63434191 -22004289 - AluJo SINE Alu -8 304 3 743 162 34 0 chr17 63434207 63434355 -22004125 + L1MB7 LINE L1 6032 6184 0 1971 222 57 13 chr17 63434355 63434882 -22003598 + HAL1 LINE L1 1145 1694 -813 2246 68 29 26 chr17 63434887 63435197 -22003283 + AluY SINE Alu 1 311 0 474 228 173 24 chr17 63435201 63435456 -22003024 - HAL1 LINE L1 -1357 1150 858 27 51 0 17 chr17 63435458 63435482 -22002998 + AT_rich Low_complexity Low_complexity 1 24 -34 1293 219 34 10 chr17 63435482 63435779 -22002701 - AluJo SINE Alu -8 304 1 27 51 0 17 chr17 63435779 63435813 -22002667 + AT_rich Low_complexity Low_complexity 24 58 0 2129 102 18 0 chr17 63435813 63436096 -22002384 - AluSp SINE Alu -25 288 1 1599 273 104 25 chr17 63436099 63436778 -22001702 - HAL1 LINE L1 -1671 836 26 1823 168 0 3 chr17 63436845 63437143 -22001337 - AluJo SINE Alu -15 297 1 1018 147 0 0 chr17 63437265 63437421 -22001059 + AluSg/x SINE Alu 144 299 -11 21 0 0 0 chr17 63437802 63437823 -22000657 + AT_rich Low_complexity Low_complexity 1 21 0 208 320 64 26 chr17 63439128 63439206 -21999274 - L2 LINE L2 -45 3227 3147 645 244 92 55 chr17 63439231 63439448 -21999032 - MIR SINE MIR -26 236 12 213 231 0 0 chr17 63440448 63440500 -21997980 + A-rich Low_complexity Low_complexity 2 53 0 207 119 24 24 chr17 63441830 63441872 -21996608 + (TTG)n Simple_repeat Simple_repeat 2 43 0 1041 238 13 4 chr17 63441872 63442103 -21996377 + MIR SINE MIR 29 261 -1 2239 97 0 3 chr17 63442166 63442466 -21996014 - AluSx SINE Alu -13 299 1 554 263 21 53 chr17 63442506 63442696 -21995784 + L2 LINE L2 3124 3307 -6 2139 137 0 0 chr17 63442696 63443002 -21995478 + AluSx SINE Alu 1 306 -6 27 29 0 0 chr17 63443051 63443085 -21995395 + AT_rich Low_complexity Low_complexity 1 34 0 321 247 175 43 chr17 63443927 63444288 -21994192 + L1ME4a LINE L1 5405 5841 -280 725 183 0 8 chr17 63444288 63444419 -21994061 + FLAM_A SINE Alu 2 131 -2 321 247 175 43 chr17 63444419 63444506 -21993974 + L1ME4a LINE L1 5841 5915 -206 669 120 0 0 chr17 63445132 63445224 -21993256 - HY3 scRNA scRNA -9 92 1 398 296 56 0 chr17 63446341 63446449 -21992031 + MIR SINE MIR 47 160 -102 546 201 127 41 chr17 63446676 63446920 -21991560 + HAL1 LINE L1 814 1078 -1429 1903 148 7 10 chr17 63446926 63447229 -21991251 + AluJo SINE Alu 1 302 -10 912 218 148 106 chr17 63447248 63447504 -21990976 + HAL1 LINE L1 1581 1825 -682 1758 121 86 14 chr17 63447504 63447784 -21990696 - AluJb SINE Alu -12 300 1 912 218 148 106 chr17 63447784 63448312 -21990168 + HAL1 LINE L1 1825 2398 -109 854 201 6 12 chr17 63448457 63448626 -21989854 - MER5B DNA MER1_type -10 168 1 2208 105 0 3 chr17 63449326 63449620 -21988860 + AluSx SINE Alu 5 297 -15 1623 172 45 7 chr17 63449706 63449997 -21988483 + AluJo SINE Alu 6 307 -5 287 120 0 23 chr17 63450057 63450115 -21988365 - FLAM SINE Alu -2 131 82 243 0 0 0 chr17 63450115 63450142 -21988338 + (T)n Simple_repeat Simple_repeat 1 27 0 541 177 0 31 chr17 63450167 63450263 -21988217 - AluJ/FLAM SINE Alu -217 95 3 996 171 61 73 chr17 63450424 63450611 -21987869 + MER33 DNA MER1_type 1 184 -2401 1751 173 37 0 chr17 63450611 63450906 -21987574 + AluJb SINE Alu 1 306 -6 996 171 61 73 chr17 63450906 63451046 -21987434 + MER33 DNA MER1_type 184 324 0 2291 78 0 10 chr17 63451093 63451388 -21987092 - AluY SINE Alu -19 292 1 1787 151 4 0 chr17 63451513 63451785 -21986695 + AluJb SINE Alu 1 273 -39 306 238 83 0 chr17 63451800 63451884 -21986596 + polypurine Low_complexity Low_complexity 4 94 0 323 270 126 69 chr17 63452331 63452357 -21986123 + MER5A DNA MER1_type 1 24 -165 2201 111 7 0 chr17 63452357 63452654 -21985826 + AluSq SINE Alu 1 299 -14 323 270 126 69 chr17 63452654 63452801 -21985679 + MER5A DNA MER1_type 24 184 -5 2121 131 0 0 chr17 63453489 63453779 -21984701 + AluSx SINE Alu 1 290 -22 849 158 0 0 chr17 63454273 63454406 -21984074 + AluSq/x SINE Alu 1 133 -180 2126 125 10 3 chr17 63454514 63454825 -21983655 + AluSq SINE Alu 1 313 0 976 158 70 0 chr17 63454898 63455069 -21983411 + FRAM SINE Alu 1 176 0 2139 135 0 6 chr17 63455251 63455563 -21982917 + AluSx SINE Alu 1 310 -2 23 0 0 0 chr17 63455589 63455612 -21982868 + AT_rich Low_complexity Low_complexity 1 23 0 337 228 0 0 chr17 63455629 63455708 -21982772 - MER116 DNA Mariner 0 80 2 2170 108 0 22 chr17 63456450 63456764 -21981716 - AluSq SINE Alu -6 307 1 2368 82 3 0 chr17 63456766 63457059 -21981421 - AluY SINE Alu -6 305 12 1813 152 42 0 chr17 63457101 63457384 -21981096 - AluSx SINE Alu -17 295 1 188 325 249 18 chr17 63457500 63457669 -21980811 + L2 LINE L2 2570 2777 -537 481 254 35 49 chr17 63458084 63458226 -21980254 + MIR SINE MIR 57 196 -66 2082 136 0 0 chr17 63458243 63458544 -21979936 + AluSx SINE Alu 1 301 -11 427 255 13 20 chr17 63458576 63458725 -21979755 + L1M4 LINE L1 4512 4659 -1487 2248 127 3 7 chr17 63458813 63459121 -21979359 + AluSx SINE Alu 1 307 -5 1761 139 15 4 chr17 63459146 63459420 -21979060 + AluJb SINE Alu 16 292 -20 387 60 0 0 chr17 63459586 63459636 -21978844 + (TG)n Simple_repeat Simple_repeat 1 50 0 435 197 33 82 chr17 63459636 63459758 -21978722 - FLAM_C SINE Alu -17 116 1 2243 97 13 3 chr17 63459786 63460094 -21978386 + AluY SINE Alu 1 311 0 249 338 15 0 chr17 63460278 63460346 -21978134 - L3 LINE CR1 -1474 103 35 2086 118 0 13 chr17 63460496 63460800 -21977680 - AluSx SINE Alu -12 300 1 1011 170 6 12 chr17 63461000 63461171 -21977309 - AluJb SINE Alu -22 290 121 271 290 56 17 chr17 63461199 63461335 -21977145 - MIR SINE MIR -67 141 34 1372 132 155 23 chr17 63461491 63461749 -21976731 + AluJo SINE Alu 1 292 -20 21 0 0 0 chr17 63461749 63461770 -21976710 + AT_rich Low_complexity Low_complexity 1 21 0 383 347 33 33 chr17 63461781 63461883 -21976597 - L2 LINE L2 -40 3232 3128 2226 102 7 10 chr17 63461883 63462187 -21976293 + AluSq SINE Alu 1 303 -10 383 347 33 33 chr17 63462187 63462205 -21976275 - L2 LINE L2 -143 3129 3112 2197 98 10 7 chr17 63462219 63462526 -21975954 + AluSx SINE Alu 1 308 -4 2050 119 13 13 chr17 63463256 63463558 -21974922 - AluSx SINE Alu -10 302 1 1392 149 32 5 chr17 63463835 63464056 -21974424 + AluJo SINE Alu 9 235 -77 180 97 0 0 chr17 63464904 63464935 -21973545 + (T)n Simple_repeat Simple_repeat 1 31 0 203 250 0 0 chr17 63467485 63467529 -21970951 + (CA)n Simple_repeat Simple_repeat 1 44 0 824 147 0 22 chr17 63469461 63469597 -21968883 - FLAM_C SINE Alu 0 133 1 568 115 0 0 chr17 63470911 63470989 -21967491 - AluS SINE Alu -233 79 2 655 179 0 0 chr17 63471069 63471192 -21967288 + Alu SINE Alu 1 123 -188 1871 96 4 0 chr17 63471298 63471538 -21966942 - AluSx SINE Alu -71 241 1 2209 117 3 0 chr17 63472480 63472778 -21965702 + AluSx SINE Alu 1 299 -13 1025 87 4 12 chr17 63472933 63473163 -21965317 + AluSx SINE Alu 1 310 -2 2246 80 0 58 chr17 63473163 63473474 -21965006 + AluSq SINE Alu 1 293 -20 1653 105 58 71 chr17 63474669 63474814 -21963666 + AluJo SINE Alu 9 150 -162 2294 89 3 29 chr17 63474814 63475128 -21963352 + AluSq SINE Alu 1 306 -7 1653 105 58 71 chr17 63475128 63475276 -21963204 + AluJo SINE Alu 150 298 -14 22 0 0 0 chr17 63475393 63475415 -21963065 + AT_rich Low_complexity Low_complexity 1 22 0 2104 133 3 0 chr17 63475565 63475859 -21962621 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr17 63476294 63476316 -21962164 + AT_rich Low_complexity Low_complexity 1 22 0 235 300 78 0 chr17 63476338 63476428 -21962052 + MIR SINE MIR 86 182 -80 1980 145 40 0 chr17 63476721 63477017 -21961463 + AluSx SINE Alu 1 308 -4 210 91 0 0 chr17 63477831 63477864 -21960616 + (TG)n Simple_repeat Simple_repeat 2 34 0 271 288 0 0 chr17 63477864 63477930 -21960550 + (CATATA)n Simple_repeat Simple_repeat 2 67 0 344 279 15 36 chr17 63477939 63478105 -21960375 + L1ME4a LINE L1 4964 5128 -1018 2395 82 3 0 chr17 63478112 63478415 -21960065 + AluY SINE Alu 1 304 -7 691 252 93 84 chr17 63478729 63479300 -21959180 + L1ME4a LINE L1 5293 5868 -253 1891 168 0 3 chr17 63480457 63480748 -21957732 - AluJb SINE Alu -22 290 1 2171 115 0 0 chr17 63480779 63481066 -21957414 - AluSq SINE Alu -26 287 1 281 311 16 49 chr17 63481256 63481378 -21957102 + MIR SINE MIR 3 120 -142 2337 81 10 7 chr17 63481408 63481705 -21956775 - AluSq SINE Alu -15 298 1 1533 189 28 17 chr17 63481936 63482227 -21956253 - AluJb SINE Alu -18 294 1 2136 111 17 7 chr17 63482385 63482683 -21955797 - AluSg SINE Alu -9 301 1 396 356 75 7 chr17 63482769 63482915 -21955565 + MIR3 SINE MIR 40 195 -13 428 132 0 0 chr17 63482945 63483013 -21955467 + Tigger4(Zombi) DNA MER2_type 2663 2730 -1 2273 92 0 3 chr17 63483086 63483379 -21955101 - AluSq SINE Alu -16 297 6 24 32 0 0 chr17 63484205 63484236 -21954244 + AT_rich Low_complexity Low_complexity 1 31 0 2342 81 14 0 chr17 63484598 63484893 -21953587 - AluY SINE Alu -12 299 1 23 0 0 0 chr17 63485041 63485064 -21953416 + AT_rich Low_complexity Low_complexity 1 23 0 1759 115 0 0 chr17 63485400 63485635 -21952845 - AluSg SINE Alu -75 235 1 329 306 12 0 chr17 63485914 63485999 -21952481 - L2 LINE L2 -5 3267 3182 2911 134 63 4 chr17 63485999 63486476 -21952004 + MLT1D LTR MaLR 1 505 0 1332 149 127 54 chr17 63486524 63486840 -21951640 - MER44D DNA MER2_type 0 609 1 2064 137 0 14 chr17 63487195 63487487 -21950993 + AluSx SINE Alu 1 288 -24 1898 184 58 60 chr17 63487558 63488062 -21950418 - MLT1D LTR MaLR 0 505 3 243 0 0 0 chr17 63488556 63488583 -21949897 + (A)n Simple_repeat Simple_repeat 1 27 0 1981 115 3 17 chr17 63489247 63489534 -21948946 - AluY SINE Alu -23 288 6 30 0 0 0 chr17 63489676 63489706 -21948774 + AT_rich Low_complexity Low_complexity 1 30 0 2167 103 21 0 chr17 63489754 63490044 -21948436 - AluSx SINE Alu -16 296 1 2399 81 0 0 chr17 63490052 63490349 -21948131 - AluSg SINE Alu -13 297 1 2502 58 0 0 chr17 63490571 63490865 -21947615 - AluY SINE Alu -17 294 1 2032 133 0 14 chr17 63490880 63491036 -21947444 - AluSx SINE Alu -23 289 137 2284 99 0 3 chr17 63491036 63491338 -21947142 - AluSc SINE Alu -8 301 1 2032 133 0 14 chr17 63491338 63491474 -21947006 - AluSx SINE Alu -175 137 1 673 246 72 29 chr17 63491487 63491694 -21946786 - MIR SINE MIR -13 249 34 2150 113 3 36 chr17 63491706 63492015 -21946465 - AluSq SINE Alu -14 299 1 2159 113 10 3 chr17 63492428 63492728 -21945752 - AluJb SINE Alu -10 302 1 1201 122 0 12 chr17 63492974 63493138 -21945342 - AluSq SINE Alu -17 296 135 23 0 0 0 chr17 63493460 63493483 -21944997 + AT_rich Low_complexity Low_complexity 1 23 0 2074 105 34 3 chr17 63493948 63494243 -21944237 + AluSx SINE Alu 1 304 -8 2377 89 0 0 chr17 63494707 63495009 -21943471 + AluSc SINE Alu 1 302 -7 206 225 0 0 chr17 63495908 63495948 -21942532 + A-rich Low_complexity Low_complexity 5 44 0 785 168 0 8 chr17 63496180 63496305 -21942175 - FLAM_C SINE Alu -9 124 1 453 261 70 0 chr17 63496656 63496771 -21941709 - MIR SINE MIR -111 151 29 318 352 101 13 chr17 63496774 63496933 -21941547 + L3 LINE CR1 1404 1576 -1 1899 128 32 4 chr17 63496990 63497271 -21941209 + AluJb SINE Alu 1 289 -23 2138 133 0 0 chr17 63497353 63497654 -21940826 + AluSx SINE Alu 1 301 -11 992 192 89 0 chr17 63498928 63499131 -21939349 - MER58A DNA MER1_type -1 223 3 536 217 40 7 chr17 63499846 63499998 -21938482 + MER103 DNA DNA 10 166 0 340 197 53 0 chr17 63500300 63500376 -21938104 - MIR3 SINE MIR -15 193 114 2283 63 3 3 chr17 63501013 63501324 -21937156 - AluY SINE Alu 0 311 1 257 192 0 0 chr17 63501447 63501499 -21936981 - Alu SINE Alu 0 302 251 1741 234 72 53 chr17 63501620 63502371 -21936109 + HAL1 LINE L1 1743 2507 0 981 180 6 22 chr17 63502417 63502595 -21935885 + FAM SINE Alu 1 175 0 1304 147 32 58 chr17 63503041 63503206 -21935274 - Tigger6 DNA MER2_type 0 1597 1429 1716 194 20 0 chr17 63503206 63503500 -21934980 - AluJb SINE Alu -12 300 1 1304 147 32 58 chr17 63503500 63503583 -21934897 - Tigger6 DNA MER2_type -168 1429 1356 1968 159 0 3 chr17 63503583 63503885 -21934595 - AluSg SINE Alu -9 301 1 1304 147 32 58 chr17 63503885 63503948 -21934532 - Tigger6 DNA MER2_type -241 1356 1293 2342 104 3 0 chr17 63503948 63504256 -21934224 - AluSp SINE Alu -4 309 1 1423 194 45 82 chr17 63504260 63504377 -21934103 - Tigger6 DNA MER2_type -1206 391 271 1216 148 30 38 chr17 63504377 63504614 -21933866 + MER46A DNA MER2_type 1 235 -1 1423 194 45 82 chr17 63504614 63504898 -21933582 - Tigger6 DNA MER2_type -1326 271 5 1851 75 124 50 chr17 63504962 63505244 -21933236 + AluSx SINE Alu 1 303 -9 358 339 62 42 chr17 63506194 63506386 -21932094 + MIR SINE MIR 5 200 -62 2324 98 0 3 chr17 63506392 63506688 -21931792 + AluSx SINE Alu 1 295 -17 271 234 117 32 chr17 63506722 63506816 -21931664 + L2 LINE L2 3171 3272 0 241 274 0 0 chr17 63506991 63507042 -21931438 + MIR SINE MIR 199 249 -13 277 134 3 31 chr17 63507291 63507375 -21931105 + L1MB4 LINE L1 5718 5804 -365 2340 78 3 0 chr17 63507375 63507668 -21930812 - AluSc SINE Alu -15 294 1 2093 131 28 8 chr17 63507673 63508032 -21930448 - L1PB4 LINE L1 -2 6154 5789 435 163 0 0 chr17 63508032 63508112 -21930368 + (TG)n Simple_repeat Simple_repeat 2 81 0 940 169 77 0 chr17 63508112 63508295 -21930185 - L1MB4 LINE L1 -364 5792 5596 2181 111 25 43 chr17 63508295 63508566 -21929914 + L1MB4 LINE L1 5790 6053 -127 2052 117 13 10 chr17 63508566 63508865 -21929615 + AluSx SINE Alu 1 300 -12 2181 111 25 43 chr17 63508865 63508990 -21929490 + L1MB4 LINE L1 6053 6179 -1 24 0 0 0 chr17 63509006 63509030 -21929450 + AT_rich Low_complexity Low_complexity 1 24 0 452 197 134 14 chr17 63509050 63509192 -21929288 + Charlie1 DNA MER1_type 1 159 -2602 * 1003 149 27 103 chr17 63509190 63509345 -21929135 + Charlie1 DNA MER1_type 2457 2575 -186 950 213 0 0 chr17 63509345 63509509 -21928971 - FAM SINE Alu -7 168 5 1003 149 27 103 chr17 63509509 63509682 -21928798 + Charlie1 DNA MER1_type 2575 2760 -1 709 255 114 80 chr17 63510377 63510570 -21927910 + L1MEc LINE L1 1089 1274 -5122 1958 94 3 81 chr17 63510570 63510878 -21927602 + AluSq SINE Alu 1 284 -29 183 42 0 0 chr17 63510878 63510902 -21927578 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 709 255 114 80 chr17 63510902 63511049 -21927431 + L1MEc LINE L1 1274 1415 -4981 2212 122 0 0 chr17 63511049 63511344 -21927136 + AluSg SINE Alu 1 295 -15 709 255 114 80 chr17 63511344 63511363 -21927117 + L1MEc LINE L1 1415 1432 -4964 1723 123 0 12 chr17 63511363 63511616 -21926864 + AluSx SINE Alu 55 304 -8 709 255 114 80 chr17 63511616 63511731 -21926749 + L1MEc LINE L1 1432 1542 -4854 706 175 7 51 chr17 63511731 63511868 -21926612 - FLAM_C SINE Alu -2 131 1 709 255 114 80 chr17 63511868 63512240 -21926240 + L1MEc LINE L1 1542 1968 -4428 599 242 68 40 chr17 63512220 63512542 -21925938 + L1MEc LINE L1 2180 2510 -3886 * 1478 167 7 51 chr17 63512543 63512672 -21925808 + AluJb SINE Alu 17 150 -162 2385 65 0 13 chr17 63512672 63512978 -21925502 + AluY SINE Alu 2 303 -8 1478 167 7 51 chr17 63512978 63513142 -21925338 + AluJb SINE Alu 150 297 -15 2090 129 0 3 chr17 63513175 63513310 -21925170 + AluSx SINE Alu 1 135 -177 2242 82 0 0 chr17 63513310 63513633 -21924847 + AluY SINE Alu 1 323 0 2090 129 0 3 chr17 63513633 63513790 -21924690 + AluSx SINE Alu 135 293 -19 2186 57 43 43 chr17 63513792 63514093 -21924387 + AluY SINE Alu 3 303 -8 5471 147 24 25 chr17 63514100 63514406 -21924074 + L1PA16 LINE L1 4490 4795 -1371 2037 98 4 0 chr17 63514406 63514672 -21923808 + AluY SINE Alu 1 267 -44 5471 147 24 25 chr17 63514672 63516039 -21922441 + L1PA16 LINE L1 4795 6153 -13 903 208 0 5 chr17 63516170 63516386 -21922094 + L1MEc LINE L1 2455 2669 -3546 276 311 76 23 chr17 63516459 63516499 -21921981 - MIR SINE MIR -106 156 120 2115 128 3 0 chr17 63516499 63516795 -21921685 - AluSx SINE Alu -15 297 1 276 311 76 23 chr17 63516795 63516886 -21921594 - MIR SINE MIR -142 120 18 2401 87 0 0 chr17 63517177 63517476 -21921004 - AluSg SINE Alu -11 299 1 957 176 6 6 chr17 63517802 63517961 -21920519 - AluJo SINE Alu -151 161 3 1050 186 0 0 chr17 63517982 63518149 -21920331 - FRAM SINE Alu -12 164 1 356 167 226 0 chr17 63518240 63518342 -21920138 - MER3 DNA MER1_type -4 205 81 1924 150 0 3 chr17 63518434 63518727 -21919753 - AluSx SINE Alu -12 300 9 300 215 51 13 chr17 63518773 63518852 -21919628 - L1ME4a LINE L1 -33 6088 6007 913 142 22 0 chr17 63518870 63519004 -21919476 + FRAM SINE Alu 20 156 -20 316 274 25 65 chr17 63519043 63519244 -21919236 - L1ME4a LINE L1 -186 5935 5743 2359 100 10 0 chr17 63519839 63520148 -21918332 + AluSx SINE Alu 1 312 0 387 0 0 0 chr17 63520162 63520205 -21918275 + (TA)n Simple_repeat Simple_repeat 1 43 0 2368 94 7 0 chr17 63520454 63520761 -21917719 + AluSq SINE Alu 1 309 -4 2619 55 0 0 chr17 63520854 63521161 -21917319 + AluY SINE Alu 1 307 -4 2216 109 0 32 chr17 63521935 63522246 -21916234 + AluSq SINE Alu 1 301 -12 2236 111 7 0 chr17 63522697 63523003 -21915477 + AluSg SINE Alu 1 308 -2 2437 76 0 3 chr17 63523141 63523442 -21915038 + AluSq SINE Alu 1 300 -13 490 302 6 41 chr17 63524277 63524446 -21914034 - MIR3 SINE MIR -37 171 9 181 352 0 42 chr17 63525721 63525792 -21912688 - L3b LINE CR1 -3 1580 1513 267 295 0 0 chr17 63526060 63526121 -21912359 - L2 LINE L2 -9 3263 3203 1889 130 0 20 chr17 63526174 63526311 -21912169 + AluSx SINE Alu 1 139 -173 2432 88 7 0 chr17 63526311 63526616 -21911864 + AluSp SINE Alu 1 307 -6 1889 130 0 20 chr17 63526616 63526771 -21911709 + AluSx SINE Alu 139 287 -25 255 200 75 25 chr17 63526831 63526911 -21911569 + MER112 DNA MER1_type 1 84 -176 263 206 0 44 chr17 63527046 63527114 -21911366 + MER112 DNA MER1_type 175 239 -21 394 197 254 0 chr17 63527149 63527271 -21911209 - MIR SINE MIR -13 249 97 224 298 70 0 chr17 63527348 63527405 -21911075 + L3 LINE CR1 1514 1574 -3 199 236 136 27 chr17 63527512 63527622 -21910858 + L2 LINE L2 2361 2482 -832 1095 154 0 6 chr17 63527683 63527845 -21910635 - AluSg/x SINE Alu -18 292 132 2325 96 0 3 chr17 63527845 63528147 -21910333 - AluSx SINE Alu -11 301 1 1451 191 41 27 chr17 63528151 63528445 -21910035 - AluJb SINE Alu -14 298 1 194 130 43 43 chr17 63528666 63528712 -21909768 - L3b LINE CR1 -8 1575 1530 2288 92 0 0 chr17 63528774 63529056 -21909424 + AluSg SINE Alu 5 286 -24 370 290 28 0 chr17 63529137 63529244 -21909236 - L3 LINE CR1 -907 670 561 2054 120 0 10 chr17 63529359 63529651 -21908829 - AluSx SINE Alu -23 289 1 2086 138 7 0 chr17 63529776 63530073 -21908407 - AluSx SINE Alu -11 301 3 341 235 193 0 chr17 63530085 63530204 -21908276 + L1MC4a LINE L1 5261 5402 -2406 895 241 60 12 chr17 63530223 63530472 -21908008 - MIR SINE MIR 0 262 2 253 173 135 0 chr17 63530513 63530565 -21907915 + L1MC4a LINE L1 5498 5556 -2252 1991 154 7 3 chr17 63530572 63530877 -21907603 + AluSx SINE Alu 1 306 -6 1632 186 21 0 chr17 63530936 63531221 -21907259 + AluJb SINE Alu 21 311 -1 360 313 56 7 chr17 63531269 63531413 -21907067 + L1MC4a LINE L1 5713 5863 -1945 1980 98 6 80 chr17 63531449 63531774 -21906706 - AluSp SINE Alu -12 301 1 1986 138 0 0 chr17 63531826 63532117 -21906363 + AluSx SINE Alu 1 291 -21 225 0 0 0 chr17 63532123 63532148 -21906332 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 2118 137 0 13 chr17 63533873 63534186 -21904294 + AluSx SINE Alu 1 309 -3 1588 189 27 20 chr17 63534299 63534596 -21903884 + AluJb SINE Alu 1 299 -13 604 113 57 64 chr17 63534604 63534745 -21903735 + L1PA15 LINE L1 6022 6161 -4 1737 167 61 91 chr17 63534768 63535195 -21903285 + L1MB8 LINE L1 4799 5176 -1002 747 189 0 8 chr17 63535195 63535327 -21903153 + FLAM_A SINE Alu 1 131 -2 1737 167 61 91 chr17 63535327 63535740 -21902740 + L1MB8 LINE L1 5176 5600 -578 1031 168 0 12 chr17 63535740 63535907 -21902573 + AluSg/x SINE Alu 131 295 -17 2425 95 0 0 chr17 63535907 63536212 -21902268 + AluSq SINE Alu 1 305 -8 2276 166 78 18 chr17 63536223 63536724 -21901756 + L1MB8 LINE L1 5616 6146 -32 2447 71 7 0 chr17 63536826 63537135 -21901345 + AluY SINE Alu 1 311 0 450 288 225 38 chr17 63537246 63537562 -21900918 - L2 LINE L2 -25 3288 2914 2259 73 11 0 chr17 63537635 63537921 -21900559 - AluY SINE Alu -22 289 1 530 155 0 0 chr17 63537980 63538064 -21900416 - AluJ/FLAM SINE Alu -228 84 1 480 129 12 12 chr17 63538325 63538410 -21900070 - AluSp/q SINE Alu -14 299 215 1626 131 0 4 chr17 63538418 63538654 -21899826 - AluSq SINE Alu -7 306 72 333 102 0 34 chr17 63538654 63538713 -21899767 + AluS SINE Alu 11 67 -236 636 179 72 126 chr17 63538716 63538923 -21899557 - MIR SINE MIR -62 200 5 1740 171 11 0 chr17 63539489 63539769 -21898711 - AluJb SINE Alu -17 295 13 2035 269 184 37 chr17 63539816 63540080 -21898400 + L2 LINE L2 1691 1915 -1398 2231 92 7 7 chr17 63540080 63540386 -21898094 + AluSx SINE Alu 1 306 -6 2035 269 184 37 chr17 63540386 63540943 -21897537 + L2 LINE L2 1915 2389 -924 1556 153 67 0 chr17 63540943 63541198 -21897282 - AluSg SINE Alu -38 272 1 2187 118 3 3 chr17 63541199 63541496 -21896984 - AluSq SINE Alu -16 297 1 2035 269 184 37 chr17 63541496 63542084 -21896396 + L2 LINE L2 2388 3313 0 2006 142 10 0 chr17 63543906 63544202 -21894278 - AluSx SINE Alu -13 299 1 1986 139 17 10 chr17 63545566 63545868 -21892612 + AluSx SINE Alu 1 304 -8 228 214 0 0 chr17 63546407 63546463 -21892017 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 0 0 0 chr17 63547113 63547137 -21891343 + AT_rich Low_complexity Low_complexity 1 24 0 2128 107 0 0 chr17 63547347 63547636 -21890844 + AluSg1 SINE Alu 19 307 -2 307 304 110 84 chr17 63548504 63548618 -21889862 - MIR SINE MIR 0 262 152 2062 118 7 7 chr17 63548618 63548905 -21889575 - AluSc SINE Alu -22 287 1 307 304 110 84 chr17 63548905 63549027 -21889453 - MIR SINE MIR -110 152 20 1723 128 0 0 chr17 63549030 63549272 -21889208 - AluSg/x SINE Alu 0 310 69 192 97 0 0 chr17 63549398 63549429 -21889051 + (TA)n Simple_repeat Simple_repeat 1 31 0 2027 140 0 0 chr17 63549429 63549714 -21888766 - AluSx SINE Alu -27 285 1 291 163 0 0 chr17 63549717 63549766 -21888714 + MER3 DNA MER1_type 80 128 -81 556 213 121 35 chr17 63549766 63549907 -21888573 - FRAM SINE Alu -24 152 1 353 128 32 64 chr17 63549907 63550001 -21888479 + MER3 DNA MER1_type 119 209 0 479 275 95 44 chr17 63550001 63550406 -21888074 + L1MC5 LINE L1 7330 7775 -186 268 277 103 0 chr17 63550440 63550595 -21887885 + L1MC4a LINE L1 5768 5938 -1870 1132 118 12 18 chr17 63550672 63550842 -21887638 - AluSg/x SINE Alu -14 296 128 376 148 9 37 chr17 63550842 63550950 -21887530 + (TA)n Simple_repeat Simple_repeat 2 106 0 1637 181 34 7 chr17 63551380 63551672 -21886808 - AluJb SINE Alu -12 300 1 461 256 51 8 chr17 63551704 63551821 -21886659 + MIR SINE MIR 3 124 -138 1208 168 78 7 chr17 63552378 63552645 -21885835 - L1MA8 LINE L1 -65 6226 5949 2350 85 3 0 chr17 63552645 63552940 -21885540 - AluY SINE Alu -15 296 1 1208 168 78 7 chr17 63552940 63552959 -21885521 - L1MA8 LINE L1 -342 5949 5933 2045 122 14 0 chr17 63552989 63553268 -21885212 - AluSq SINE Alu -30 283 1 639 250 0 0 chr17 63553277 63553401 -21885079 - FLAM_C SINE Alu -19 124 1 1022 174 0 0 chr17 63553401 63553585 -21884895 - L1 LINE L1 -1398 4748 4565 674 132 89 45 chr17 63553770 63553955 -21884525 + L1MA8 LINE L1 6065 6171 -18 219 256 0 39 chr17 63554166 63554244 -21884236 + (TA)n Simple_repeat Simple_repeat 1 75 0 216 0 0 0 chr17 63554258 63554282 -21884198 + (TA)n Simple_repeat Simple_repeat 1 24 0 377 69 0 0 chr17 63554294 63554352 -21884128 + L1MA8 LINE L1 6231 6288 -3 376 205 64 0 chr17 63554449 63554527 -21883953 + L2 LINE L2 3187 3269 -3 190 175 158 18 chr17 63554612 63554669 -21883811 - MIR3 SINE MIR -21 187 123 1944 128 55 0 chr17 63554743 63555033 -21883447 - AluSx SINE Alu -6 306 1 1578 116 0 37 chr17 63555036 63555139 -21883341 - AluSx SINE Alu -78 234 129 2178 79 4 7 chr17 63555139 63555438 -21883042 - AluSc SINE Alu 0 298 1 1578 116 0 37 chr17 63555438 63555574 -21882906 - AluSx SINE Alu -183 129 3 274 206 11 43 chr17 63556347 63556439 -21882041 + HAL1 LINE L1 2244 2332 -175 690 118 18 18 chr17 63556463 63556573 -21881907 + HY1 scRNA scRNA 1 110 -2 1766 134 32 35 chr17 63556607 63556920 -21881560 + AluSx SINE Alu 1 312 0 2357 98 0 7 chr17 63557013 63557320 -21881160 + AluSx SINE Alu 1 305 -7 2071 137 0 3 chr17 63557323 63557616 -21880864 + AluSx SINE Alu 21 312 0 1191 181 16 44 chr17 63557759 63558007 -21880473 + AluJo SINE Alu 17 257 -55 52 58 0 0 chr17 63558053 63558140 -21880340 + AT_rich Low_complexity Low_complexity 1 87 0 1399 177 57 57 chr17 63558306 63558606 -21879874 - AluJo SINE Alu -12 300 1 1972 122 4 11 chr17 63558936 63559214 -21879266 - AluSq SINE Alu -37 276 1 2178 97 10 23 chr17 63559218 63559528 -21878952 - AluSq SINE Alu -7 306 1 930 200 0 6 chr17 63559533 63559698 -21878782 - FAM SINE Alu -8 167 4 266 323 32 11 chr17 63560225 63560318 -21878162 - MIR SINE MIR -118 144 50 2663 163 12 6 chr17 63560333 63560849 -21877631 + L1MB4 LINE L1 5311 5829 -351 1995 140 3 0 chr17 63560963 63561255 -21877225 - AluSg SINE Alu -17 293 1 2280 97 0 3 chr17 63561667 63561967 -21876513 - AluSx SINE Alu -11 301 3 27 0 0 0 chr17 63562328 63562355 -21876125 + AT_rich Low_complexity Low_complexity 1 27 0 282 352 72 8 chr17 63562414 63562539 -21875941 - MIR3 SINE MIR -38 170 38 242 252 139 33 chr17 63563027 63563178 -21875302 + HAL1 LINE L1 120 286 -2221 1143 276 130 32 chr17 63563338 63563887 -21874593 + L2 LINE L2 2710 3312 -1 220 286 122 48 chr17 63564482 63564629 -21873851 - MIR SINE MIR -46 216 59 22 0 0 0 chr17 63565003 63565025 -21873455 + AT_rich Low_complexity Low_complexity 1 22 0 2012 152 10 0 chr17 63565556 63565858 -21872622 - AluJb SINE Alu -7 305 1 216 0 0 0 chr17 63565885 63565909 -21872571 + (T)n Simple_repeat Simple_repeat 1 24 0 734 148 0 67 chr17 63566734 63566869 -21871611 + FLAM_C SINE Alu 1 126 -7 306 0 0 0 chr17 63566978 63567012 -21871468 + (TA)n Simple_repeat Simple_repeat 1 34 0 946 125 7 14 chr17 63567017 63567161 -21871319 - FLAM_C SINE Alu 0 143 1 282 208 139 0 chr17 63567282 63567354 -21871126 - AluJ/FRAM SINE Alu -5 297 216 250 179 0 36 chr17 63567330 63567386 -21871094 - FLAM_A SINE Alu -69 63 10 * 399 342 0 26 chr17 63567404 63567559 -21870921 - L3 LINE CR1 -113 1464 1314 751 197 52 24 chr17 63567571 63567784 -21870696 + MER33 DNA MER1_type 1 219 -105 2158 103 0 7 chr17 63567785 63568075 -21870405 + AluSx SINE Alu 1 288 -24 203 0 0 36 chr17 63568089 63568117 -21870363 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 2126 198 70 69 chr17 63568544 63569287 -21869193 + Charlie1a DNA MER1_type 10 753 -702 864 187 34 43 chr17 63569401 63569481 -21868999 - MER2 DNA MER2_type -135 210 131 1911 142 0 36 chr17 63569481 63569790 -21868690 + AluSx SINE Alu 1 298 -14 864 187 34 43 chr17 63569790 63569918 -21868562 - MER2 DNA MER2_type -214 131 4 2331 166 158 13 chr17 63569921 63570528 -21867952 + Charlie1a DNA MER1_type 755 1449 -6 2374 87 0 7 chr17 63570793 63571102 -21867378 - AluY SINE Alu -4 307 1 254 152 89 38 chr17 63571320 63571399 -21867081 - L1ME3 LINE L1 -3 6159 6077 2229 87 7 13 chr17 63571438 63571737 -21866743 - AluSc SINE Alu -12 297 1 6763 39 3 25 chr17 63571746 63572593 -21865887 - SVA Other Other 0 1386 558 1906 160 7 3 chr17 63572945 63573233 -21865247 + AluSx SINE Alu 3 291 -21 198 0 0 0 chr17 63573233 63573255 -21865225 + (TA)n Simple_repeat Simple_repeat 2 23 0 299 330 102 0 chr17 63573277 63573395 -21865085 + L2 LINE L2 3182 3311 -2 308 191 0 56 chr17 63573434 63573523 -21864957 + L1MC/D LINE L1 5719 5802 -2006 687 181 0 30 chr17 63573530 63573663 -21864817 - FLAM_C SINE Alu 0 133 5 1347 143 100 0 chr17 63573763 63573993 -21864487 - 7SLRNA srpRNA srpRNA -14 306 54 346 94 0 19 chr17 63574251 63574304 -21864176 + MER66B LTR ERV1 295 346 -140 261 302 0 23 chr17 63574304 63574390 -21864090 + GA-rich Low_complexity Low_complexity 3 86 0 2227 107 0 13 chr17 63574673 63574971 -21863509 + AluSx SINE Alu 1 294 -18 2131 123 0 0 chr17 63574992 63575293 -21863187 + AluY SINE Alu 1 301 -10 2482 63 0 0 chr17 63575599 63575902 -21862578 + AluY SINE Alu 1 303 -8 1169 108 12 0 chr17 63575902 63576068 -21862412 + AluY SINE Alu 133 300 -11 2438 62 3 7 chr17 63576068 63576376 -21862104 + AluY SINE Alu 1 307 -4 388 251 98 95 chr17 63576384 63576783 -21861697 + HAL1 LINE L1 1343 1742 -765 319 313 61 35 chr17 63577432 63577946 -21860534 + L1ME LINE L1 5318 5849 -321 2189 107 17 0 chr17 63577972 63578263 -21860217 + AluSx SINE Alu 1 296 -16 186 214 18 36 chr17 63579750 63579806 -21858674 + MER5A DNA MER1_type 42 96 -93 2295 103 3 0 chr17 63579967 63580278 -21858202 + AluSx SINE Alu 1 312 0 369 186 0 0 chr17 63580428 63580498 -21857982 + AluJ/FRAM SINE Alu 233 302 0 2338 101 0 3 chr17 63581162 63581470 -21857010 - AluSg SINE Alu -3 307 1 2391 83 3 0 chr17 63582616 63582918 -21855562 + AluSq SINE Alu 1 303 -10 927 178 38 70 chr17 63583299 63583512 -21854968 - MER20 DNA MER1_type -12 207 2 2171 112 26 3 chr17 63583732 63584037 -21854443 + AluSq SINE Alu 1 312 -1 847 280 132 54 chr17 63584572 63585241 -21853239 - L2 LINE L2 -5 3308 2583 1418 78 31 5 chr17 63585306 63585499 -21852981 - AluSg/x SINE Alu -10 300 103 1935 144 21 0 chr17 63585624 63585908 -21852572 + AluJo SINE Alu 1 290 -22 923 246 122 53 chr17 63586217 63586595 -21851885 - LTR33A LTR ERVL -110 413 10 2220 116 0 0 chr17 63586920 63587212 -21851268 - AluSx SINE Alu -18 294 3 3603 101 22 7 chr17 63587432 63587977 -21850503 - L1PA14 LINE L1 0 6161 5609 1302 226 45 39 chr17 63588021 63588282 -21850198 - MER58B DNA MER1_type -2079 341 76 1946 127 34 14 chr17 63588282 63588573 -21849907 + AluSx SINE Alu 1 297 -15 1302 226 45 39 chr17 63588573 63588648 -21849832 - MER58B DNA MER1_type -2344 76 3 21 36 0 0 chr17 63589364 63589392 -21849088 + AT_rich Low_complexity Low_complexity 1 28 0 6517 181 44 2 chr17 63589400 63591459 -21847021 + L1PA14 LINE L1 4051 6161 0 1893 77 0 16 chr17 63591515 63591762 -21846718 + AluY SINE Alu 60 302 -9 1385 174 76 51 chr17 63591772 63592047 -21846433 + AluJo SINE Alu 1 282 -30 721 231 82 43 chr17 63593988 63594269 -21844211 + L1MC4 LINE L1 7749 8040 -2 22 56 0 0 chr17 63594630 63594666 -21843814 + AT_rich Low_complexity Low_complexity 1 36 0 204 125 0 0 chr17 63594682 63594714 -21843766 + (T)n Simple_repeat Simple_repeat 1 32 0 2218 117 0 10 chr17 63595088 63595396 -21843084 + AluSx SINE Alu 1 305 -7 424 254 109 57 chr17 63595552 63595745 -21842735 + MLT1I LTR MaLR 99 301 -108 2080 126 0 10 chr17 63595764 63596066 -21842414 + AluSx SINE Alu 1 299 -13 31 0 0 0 chr17 63596066 63596097 -21842383 + AT_rich Low_complexity Low_complexity 1 31 0 501 296 35 65 chr17 63596292 63596630 -21841850 + MLT1I LTR MaLR 65 392 -17 2272 102 3 10 chr17 63597099 63597403 -21841077 + AluSx SINE Alu 1 302 -10 2127 113 3 22 chr17 63597729 63598047 -21840433 + AluSx SINE Alu 1 312 0 25 51 0 0 chr17 63799820 63799859 -21638621 + GC_rich Low_complexity Low_complexity 1 39 0 636 179 45 0 chr17 63800078 63800190 -21638290 - FLAM_C SINE Alu -16 117 1 1453 166 95 47 chr17 63800760 63801056 -21637424 - AluJb SINE Alu 0 312 3 186 43 0 0 chr17 63801198 63801221 -21637259 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1019 198 61 5 chr17 63801283 63801495 -21636985 + MIR SINE MIR 31 254 -8 21 36 0 0 chr17 63801518 63801546 -21636934 + AT_rich Low_complexity Low_complexity 1 28 0 1952 114 21 7 chr17 63801556 63801837 -21636643 + AluSx SINE Alu 11 295 -17 1594 185 40 4 chr17 63801948 63802224 -21636256 - AluJb SINE Alu -26 286 1 452 173 0 12 chr17 63802247 63802328 -21636152 + MER116 DNA Mariner 1 80 0 1580 188 0 19 chr17 63802458 63802729 -21635751 + AluJo SINE Alu 30 295 -17 342 0 0 0 chr17 63802729 63802767 -21635713 + (TC)n Simple_repeat Simple_repeat 2 39 0 2165 125 0 10 chr17 63802823 63803127 -21635353 + AluSx SINE Alu 1 301 -11 285 186 186 14 chr17 63803181 63803321 -21635159 + L1MC/D LINE L1 5272 5435 -2607 405 162 0 0 chr17 63803640 63803708 -21634772 - MER3 DNA MER1_type 0 209 142 815 207 73 0 chr17 63803721 63803885 -21634595 + AluJo SINE Alu 4 179 -133 1930 105 0 0 chr17 63803987 63804235 -21634245 - AluSx SINE Alu -64 248 1 652 175 16 24 chr17 63804261 63804387 -21634093 - MER3 DNA MER1_type -84 125 1 2161 93 31 0 chr17 63804556 63804846 -21633634 - AluSg SINE Alu -11 299 1 2305 102 7 0 chr17 63806138 63806433 -21632047 + AluSx SINE Alu 1 297 -15 1097 172 81 5 chr17 63806612 63806810 -21631670 + AluJo SINE Alu 82 294 -18 2754 23 0 16 chr17 63806878 63807188 -21631292 + AluY SINE Alu 1 305 -6 1192 97 0 7 chr17 63807938 63808092 -21630388 + AluSp SINE Alu 1 153 -160 205 184 122 0 chr17 63808284 63808333 -21630147 + MIR SINE MIR 92 146 -62 213 208 296 48 chr17 63809672 63809687 -21628793 + MIR SINE MIR 21 31 -231 1724 138 41 66 chr17 63809687 63810006 -21628474 + AluSx SINE Alu 1 311 -1 213 208 296 48 chr17 63810006 63810115 -21628365 + MIR SINE MIR 31 176 -86 242 386 62 0 chr17 63810338 63810483 -21627997 - MIR SINE MIR -108 154 1 2025 121 14 10 chr17 63810603 63810892 -21627588 - AluSx SINE Alu -22 290 1 2106 119 24 3 chr17 63811112 63811407 -21627073 - AluSx SINE Alu -11 301 1 3017 167 60 8 chr17 63811679 63812211 -21626269 - MER68 LTR ERV1 0 562 3 216 255 10 41 chr17 63812316 63812414 -21626066 + A-rich Low_complexity Low_complexity 3 97 0 1821 115 0 8 chr17 63812616 63812860 -21625620 + AluSx SINE Alu 39 280 -32 1770 95 9 0 chr17 63812966 63813188 -21625292 - AluSq SINE Alu -87 226 3 530 271 49 53 chr17 63813196 63813443 -21625037 - HAL1 LINE L1 -423 2084 1839 1071 177 226 12 chr17 63813452 63813613 -21624867 - AluSg1 SINE Alu -14 295 170 1959 152 3 13 chr17 63813613 63813915 -21624565 - AluSx SINE Alu -13 299 1 1071 177 226 12 chr17 63813915 63813996 -21624484 - AluSg1 SINE Alu -139 170 1 2279 83 7 3 chr17 63814007 63814297 -21624183 - AluSc SINE Alu -18 291 1 2427 90 0 10 chr17 63814306 63814618 -21623862 - AluSc SINE Alu 0 309 1 2311 109 0 13 chr17 63814911 63815222 -21623258 - AluY SINE Alu -4 307 1 371 292 46 0 chr17 63815342 63815472 -21623008 - L1MC4a LINE L1 -1941 5867 5732 1905 169 13 3 chr17 63815491 63815793 -21622687 + AluJo SINE Alu 1 305 -7 832 222 13 0 chr17 63815793 63815946 -21622534 + AluJb SINE Alu 137 291 -21 2550 84 0 0 chr17 63815951 63816259 -21622221 + AluY SINE Alu 1 308 -3 327 49 0 0 chr17 63816424 63816465 -21622015 + (TTTTG)n Simple_repeat Simple_repeat 3 43 0 1606 194 4 11 chr17 63816466 63816745 -21621735 - AluJo SINE Alu -35 277 1 324 326 38 81 chr17 63816830 63816925 -21621555 - L2 LINE L2 -193 3079 2982 2391 40 57 17 chr17 63816925 63817221 -21621259 + AluY SINE Alu 1 308 -3 324 326 38 81 chr17 63817221 63817361 -21621119 - L2 LINE L2 -290 2982 2854 314 224 112 17 chr17 63817744 63817860 -21620620 + HAL1 LINE L1 2153 2279 -228 329 132 38 0 chr17 63817865 63817918 -21620562 + MER66A LTR ERV1 284 338 -140 764 156 7 22 chr17 63818002 63818137 -21620343 + FLAM_C SINE Alu 7 139 -4 22 25 0 25 chr17 63818261 63818278 -21620202 + AT_rich Low_complexity Low_complexity 1 17 -22 1776 136 59 28 chr17 63818278 63818565 -21619915 - AluSx SINE Alu -16 296 1 22 25 0 25 chr17 63818565 63818587 -21619893 + AT_rich Low_complexity Low_complexity 17 39 0 2432 91 0 3 chr17 63821212 63821521 -21616959 + AluY SINE Alu 1 308 -3 2261 92 0 52 chr17 63821530 63821857 -21616623 + AluSx SINE Alu 1 310 -2 205 73 24 24 chr17 63821910 63821951 -21616529 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 2424 74 6 10 chr17 63822061 63822372 -21616108 + AluY SINE Alu 2 311 0 1751 162 4 0 chr17 63822382 63822648 -21615832 + AluJb SINE Alu 1 267 -45 2458 84 0 3 chr17 63822659 63822967 -21615513 + AluSc SINE Alu 1 307 -2 2288 114 16 0 chr17 63823004 63823311 -21615169 + AluSx SINE Alu 1 312 0 2222 112 10 13 chr17 63825695 63826008 -21612472 - AluSq SINE Alu -1 312 1 1738 91 124 19 chr17 63826012 63826277 -21612203 - AluSg SINE Alu -17 293 1 741 239 12 12 chr17 63827301 63827464 -21611016 + FRAM SINE Alu 1 163 -3 584 303 70 17 chr17 63827542 63827604 -21610876 + MIR SINE MIR 9 66 -196 2280 109 30 0 chr17 63827604 63827908 -21610572 + AluSp SINE Alu 1 313 0 584 303 70 17 chr17 63827908 63828086 -21610394 + MIR SINE MIR 66 262 0 2232 138 0 0 chr17 63828130 63828428 -21610052 + AluSx SINE Alu 1 298 -14 2216 66 0 4 chr17 63828428 63828698 -21609782 + AluY SINE Alu 27 297 -14 415 243 159 68 chr17 63828698 63828949 -21609531 + L1MC4a LINE L1 5624 5897 -1911 1440 168 69 44 chr17 63828959 63829233 -21609247 + AluJb SINE Alu 10 290 -22 873 157 0 15 chr17 63829280 63829414 -21609066 - FLAM_C SINE Alu 0 133 2 1743 200 0 16 chr17 63829971 63830276 -21608204 - AluJb SINE Alu -12 300 1 2131 104 69 0 chr17 63830322 63830610 -21607870 - AluSx SINE Alu -2 310 3 483 122 0 24 chr17 63830741 63830823 -21607657 + MADE1 DNA Mariner 1 80 0 502 245 21 75 chr17 63831330 63831518 -21606962 - MER5B DNA MER1_type 0 178 1 256 323 165 24 chr17 63832540 63832593 -21605887 + L2 LINE L2 3127 3171 -101 267 246 0 0 chr17 63832593 63832650 -21605830 + MIR SINE MIR 194 250 -12 256 323 165 24 chr17 63832650 63832667 -21605813 + L2 LINE L2 3171 3271 -1 1956 162 0 13 chr17 63832774 63833083 -21605397 - AluJb SINE Alu -7 305 1 59 65 0 0 chr17 63835901 63836009 -21602471 + GC_rich Low_complexity Low_complexity 1 108 0 1960 109 0 0 chr17 63836177 63836434 -21602046 - AluSg SINE Alu -45 265 9 355 232 54 30 chr17 63837844 63838012 -21600468 + G-rich Low_complexity Low_complexity 6 177 0 21 36 0 0 chr17 63838375 63838403 -21600077 + GC_rich Low_complexity Low_complexity 1 28 0 201 207 35 0 chr17 63839383 63839441 -21599039 + (CCCTG)n Simple_repeat Simple_repeat 1 60 0 917 121 0 0 chr17 63841030 63841162 -21597318 + AluY SINE Alu 178 309 -2 2132 117 0 33 chr17 63841322 63841622 -21596858 + AluSx SINE Alu 1 290 -22 2064 141 0 10 chr17 63841632 63841930 -21596550 + AluJb SINE Alu 1 295 -17 2308 104 7 0 chr17 63841954 63842253 -21596227 + AluSx SINE Alu 1 301 -11 2296 110 3 3 chr17 63842630 63842929 -21595551 + AluSx SINE Alu 1 299 -13 567 273 239 0 chr17 63843320 63843529 -21594951 - MIR SINE MIR -2 260 2 2150 117 40 10 chr17 63844435 63844735 -21593745 - AluSq SINE Alu -4 309 1 310 238 238 25 chr17 63846404 63846526 -21591954 + L3 LINE CR1 1404 1551 -26 25 0 0 0 chr17 63846883 63846908 -21591572 + AT_rich Low_complexity Low_complexity 1 25 0 1312 90 0 0 chr17 63848073 63848239 -21590241 - AluSg/x SINE Alu 0 310 145 1707 173 0 19 chr17 63848289 63848555 -21589925 + AluJo SINE Alu 1 261 -51 2328 78 0 14 chr17 63848582 63848878 -21589602 + AluSg SINE Alu 1 292 -18 632 135 0 19 chr17 63849482 63849586 -21588894 - AluJo/FRAM SINE Alu 0 312 211 1039 147 6 6 chr17 63849497 63849660 -21588820 - FRAM SINE Alu -3 163 1 315 253 153 53 chr17 63849662 63849706 -21588774 - L1M4 LINE L1 -649 5529 5491 2224 86 10 0 chr17 63849706 63849997 -21588483 - AluSc SINE Alu -15 294 1 315 253 153 53 chr17 63849997 63850048 -21588432 - L1M4 LINE L1 -687 5491 5446 1856 104 48 4 chr17 63850048 63850344 -21588136 - AluSx SINE Alu 0 308 1 315 253 153 53 chr17 63850344 63850416 -21588064 - L1M4 LINE L1 -731 5447 5343 1924 109 7 7 chr17 63850431 63850705 -21587775 - AluSx SINE Alu -4 308 35 430 151 0 27 chr17 63850706 63850779 -21587701 - AluSq/x SINE Alu -198 115 45 690 106 0 29 chr17 63850943 63851047 -21587433 + AluSp/q SINE Alu 200 300 -13 1430 117 0 0 chr17 63851056 63851253 -21587227 + AluSx SINE Alu 1 197 -115 1988 138 0 0 chr17 63851314 63851605 -21586875 + AluSx SINE Alu 1 291 -21 26 0 0 0 chr17 63852565 63852591 -21585889 + AT_rich Low_complexity Low_complexity 1 26 0 24 77 0 0 chr17 63853685 63853737 -21584743 + AT_rich Low_complexity Low_complexity 1 52 0 262 301 21 11 chr17 63854262 63854355 -21584125 + MIR SINE MIR 18 111 -97 248 250 0 0 chr17 63855446 63855502 -21582978 - L2 LINE L2 0 3313 3258 876 154 0 0 chr17 63855724 63855854 -21582626 + FRAM SINE Alu 8 137 -39 1917 151 3 6 chr17 63855858 63856170 -21582310 - AluJb SINE Alu -1 311 1 1208 110 0 0 chr17 63856181 63856345 -21582135 - AluSg/x SINE Alu -20 290 127 1064 100 27 0 chr17 63858101 63858251 -21580229 - AluSx SINE Alu -158 154 1 2344 72 0 0 chr17 63859439 63859732 -21578748 + AluSq SINE Alu 1 293 -20 670 219 44 58 chr17 63859740 63860014 -21578466 + L1ME4a LINE L1 5778 6047 -74 262 174 228 11 chr17 63860138 63860230 -21578250 - L1ME4a LINE L1 -5 6116 6005 266 276 65 8 chr17 63860290 63860413 -21578067 - L1ME4a LINE L1 -249 5872 5743 2311 73 0 3 chr17 63860610 63860913 -21577567 - AluSx SINE Alu -2 310 9 444 270 147 18 chr17 63861135 63861298 -21577182 - MIR SINE MIR -72 190 7 32 26 0 0 chr17 63861338 63861377 -21577103 + AT_rich Low_complexity Low_complexity 1 39 0 362 96 0 0 chr17 63861386 63861438 -21577042 - MER106B DNA MER1_type -908 151 100 725 184 0 24 chr17 63861448 63861573 -21576907 - FLAM_C SINE Alu -17 126 5 1223 255 106 52 chr17 63861576 63861600 -21576880 + L2 LINE L2 2421 2442 -871 2074 114 35 41 chr17 63861600 63861930 -21576550 - MER47A DNA MER2_type -1957 366 37 2280 92 3 3 chr17 63861930 63862235 -21576245 + AluSq SINE Alu 1 305 -8 2074 114 35 41 chr17 63862235 63862272 -21576208 - MER47A DNA MER2_type -2286 37 1 1223 255 106 52 chr17 63862272 63862376 -21576104 + L2 LINE L2 2442 2539 -774 2052 119 24 0 chr17 63862376 63862671 -21575809 + AluSx SINE Alu 1 302 -10 360 0 0 0 chr17 63862672 63862712 -21575768 + (CA)n Simple_repeat Simple_repeat 2 41 0 1223 255 106 52 chr17 63862712 63863333 -21575147 + L2 LINE L2 2538 3278 -35 324 302 227 66 chr17 63863452 63864145 -21574335 + L2 LINE L2 2185 2987 -285 1787 119 53 20 chr17 63864148 63864450 -21574030 - AluSx SINE Alu 0 312 1 620 175 29 0 chr17 63864547 63864650 -21573830 + U6 snRNA snRNA 1 106 -1 566 135 192 0 chr17 63864650 63864778 -21573702 + L1MA2 LINE L1 6170 6317 0 1940 153 0 0 chr17 63864830 63865137 -21573343 + AluJb SINE Alu 1 307 -5 373 240 20 89 chr17 63865171 63865317 -21573163 - L2 LINE L2 0 3313 3178 490 209 118 46 chr17 63865547 63865700 -21572780 + MIR SINE MIR 17 180 -82 395 242 93 66 chr17 63865948 63866121 -21572359 - MER5A DNA MER1_type 0 189 1 2148 125 0 0 chr17 63866685 63866989 -21571491 - AluSx SINE Alu -8 304 1 340 328 108 27 chr17 63867067 63867253 -21571227 - L1MC4a LINE L1 -1966 5842 5642 1982 139 7 0 chr17 63867411 63867721 -21570759 - AluSx SINE Alu 0 312 1 2346 64 0 6 chr17 63867899 63868211 -21570269 - AluY SINE Alu -1 310 1 524 227 281 11 chr17 63870115 63870300 -21568180 + MIR SINE MIR 18 252 -10 2067 114 0 9 chr17 63870314 63870630 -21567850 - AluSq SINE Alu 0 313 1 432 97 0 0 chr17 63870674 63870710 -21567770 + (TA)n Simple_repeat Simple_repeat 1 98 0 432 97 0 0 chr17 63870710 63870772 -21567708 + (TA)n Simple_repeat Simple_repeat 1 62 0 528 195 0 0 chr17 63870792 63870879 -21567601 + AluJ/FLAM SINE Alu 2 88 -224 329 235 74 0 chr17 63871012 63871093 -21567387 + L1MC4 LINE L1 6617 6703 -1339 * 353 252 0 68 chr17 63871070 63871173 -21567307 - L1MC4 LINE L1 -1344 6698 6603 308 280 38 76 chr17 63871108 63871240 -21567240 + L1MC4 LINE L1 6588 6714 -1328 * 561 108 0 0 chr17 63871390 63871464 -21567016 + AluJ/FLAM SINE Alu 24 97 -215 2253 61 41 7 chr17 63871694 63871989 -21566491 - AluY SINE Alu -6 305 1 1286 167 105 4 chr17 63871997 63872282 -21566198 - AluSx SINE Alu 0 311 1 2331 87 0 0 chr17 63872469 63872798 -21565682 - AluSg SINE Alu 0 329 1 1487 180 80 0 chr17 63872842 63873131 -21565349 - AluJb SINE Alu 0 312 1 352 301 30 30 chr17 63873232 63873398 -21565082 - HAL1b LINE L1 -437 911 746 2303 106 0 0 chr17 63873581 63873892 -21564588 - AluSx SINE Alu -1 311 1 1997 125 10 0 chr17 63874430 63874725 -21563755 + AluSx SINE Alu 1 298 -14 2145 96 10 0 chr17 63874729 63875021 -21563459 + AluSg SINE Alu 1 295 -15 965 169 0 6 chr17 63875021 63875193 -21563287 + AluJb SINE Alu 134 304 -8 912 182 24 0 chr17 63875505 63875670 -21562810 + AluSg/x SINE Alu 135 303 -7 1645 163 17 0 chr17 63876032 63876333 -21562147 - AluJb SINE Alu -5 307 2 402 193 151 42 chr17 63876355 63876474 -21562006 + HAL1b LINE L1 336 467 -881 660 147 0 0 chr17 63876686 63876781 -21561699 - AluJo SINE Alu -18 294 200 590 191 18 18 chr17 63876787 63876897 -21561583 - AluJo SINE Alu -201 111 2 352 305 191 62 chr17 63877020 63877172 -21561308 + L1MC4a LINE L1 4729 4860 -1286 1946 110 0 4 chr17 63877172 63877445 -21561035 + AluSg SINE Alu 1 272 -38 1008 117 0 0 chr17 63877447 63877601 -21560879 + (TA)n Simple_repeat Simple_repeat 2 155 0 352 305 191 62 chr17 63877601 63877662 -21560818 + L1MC4a LINE L1 4860 4912 -1234 2216 98 0 0 chr17 63877662 63877957 -21560523 + AluSx SINE Alu 1 295 -17 352 305 191 62 chr17 63877957 63878011 -21560469 + L1MC4a LINE L1 4912 5035 -1111 491 269 159 8 chr17 63878421 63878666 -21559814 + L1MC4a LINE L1 5618 5899 -1909 242 130 73 0 chr17 63879081 63879129 -21559351 + AluJb SINE Alu 1 38 -265 2155 108 17 0 chr17 63879130 63879425 -21559055 + AluSx SINE Alu 1 300 -12 1559 168 7 7 chr17 63879594 63879874 -21558606 + AluJb SINE Alu 15 294 -18 317 267 59 20 chr17 63880025 63880126 -21558354 - MIR SINE MIR -128 134 30 458 304 145 40 chr17 63880206 63880654 -21557826 + L1MC/D LINE L1 4735 5229 -917 24 0 0 0 chr17 63880656 63880680 -21557800 + AT_rich Low_complexity Low_complexity 1 24 0 2206 16 0 0 chr17 63880680 63880927 -21557553 - L1PA3 LINE L1 0 6155 5909 1619 192 3 7 chr17 63880960 63881267 -21557213 - AluJb SINE Alu -6 306 1 736 311 74 35 chr17 63881273 63881680 -21556800 + L1MC/D LINE L1 5272 5692 -700 1394 140 124 27 chr17 63881700 63882003 -21556477 + AluJb SINE Alu 1 328 0 1741 161 10 0 chr17 63882397 63882689 -21555791 + AluJo SINE Alu 7 301 -11 951 104 0 8 chr17 63882710 63882844 -21555636 + FRAM SINE Alu 35 167 -9 2156 88 3 7 chr17 63883080 63883377 -21555103 + AluSx SINE Alu 2 297 -15 632 299 154 45 chr17 63883812 63884286 -21554194 - L2 LINE L2 -19 3294 2776 1703 140 48 0 chr17 63884641 63884913 -21553567 + AluJo SINE Alu 1 285 -27 29 0 0 0 chr17 63884913 63884942 -21553538 + AT_rich Low_complexity Low_complexity 1 29 0 2018 133 0 22 chr17 63884951 63885087 -21553393 + AluSx SINE Alu 1 138 -174 2005 112 14 0 chr17 63885087 63885388 -21553092 + AluSx SINE Alu 1 305 0 2018 133 0 22 chr17 63885388 63885566 -21552914 + AluSx SINE Alu 138 310 -2 482 315 103 14 chr17 63885760 63885973 -21552507 - MIR SINE MIR -11 251 20 567 200 100 13 chr17 63886053 63886203 -21552277 + MER103 DNA DNA 2 164 -2 1343 252 103 33 chr17 63886278 63886468 -21552012 + L1ME3A LINE L1 5319 5494 -676 1950 127 7 3 chr17 63886468 63886768 -21551712 + AluSx SINE Alu 1 301 -11 1343 252 103 33 chr17 63886768 63887092 -21551388 + L1ME3A LINE L1 5494 5869 -301 767 195 0 13 chr17 63887264 63887423 -21551057 + FRAM SINE Alu 20 176 0 250 330 48 10 chr17 63887469 63887572 -21550908 + MIR SINE MIR 43 149 -113 294 172 297 0 chr17 63889701 63889765 -21548715 - MIR SINE MIR -148 114 32 2280 109 0 0 chr17 63889833 63890145 -21548335 - AluSx SINE Alu 0 312 1 1801 164 18 0 chr17 63890147 63890433 -21548047 - AluJb SINE Alu -21 291 1 664 228 107 0 chr17 63890494 63890643 -21547837 + FRAM SINE Alu 3 167 -9 300 89 0 0 chr17 63891034 63891079 -21547401 + Alu SINE Alu 257 301 -1 855 120 0 0 chr17 63891099 63891216 -21547264 + FLAM_C SINE Alu 6 122 -21 1981 123 3 16 chr17 63892093 63892403 -21546077 + AluSg SINE Alu 1 306 -4 453 293 98 27 chr17 63892653 63893022 -21545458 + L1M3 LINE L1 4945 5339 -807 226 222 99 0 chr17 63893056 63893137 -21545343 + L1M3 LINE L1 5380 5468 -703 1729 107 0 4 chr17 63893622 63893864 -21544616 + AluSx SINE Alu 29 269 -43 1816 111 8 0 chr17 63893963 63894239 -21544241 + AluSx SINE Alu 32 312 0 1741 149 3 42 chr17 63894249 63894393 -21544087 + AluSx SINE Alu 1 128 -184 2304 74 0 23 chr17 63894393 63894703 -21543777 + AluY SINE Alu 1 303 -8 1741 149 3 42 chr17 63894703 63894866 -21543614 + AluSx SINE Alu 128 296 -16 729 157 101 44 chr17 63896008 63896167 -21542313 - MER115 DNA AcHobo -22 671 504 1075 275 25 53 chr17 63896192 63896548 -21541932 - MER115 DNA AcHobo -313 380 35 313 305 92 48 chr17 63896548 63896990 -21541490 - L2 LINE L2 -231 3041 2594 627 275 106 0 chr17 63897041 63897230 -21541250 + MER3 DNA MER1_type 1 209 0 311 338 53 29 chr17 63900476 63900683 -21537797 + L2 LINE L2 2826 3037 -235 3260 207 25 31 chr17 63900947 63901123 -21537357 + L1ME1 LINE L1 4213 4388 -1758 1919 174 3 0 chr17 63901123 63901417 -21537063 + AluJb SINE Alu 1 295 -17 3260 207 25 31 chr17 63901417 63901467 -21537013 + L1ME1 LINE L1 4388 4437 -1709 1937 144 0 44 chr17 63901467 63901787 -21536693 + AluSx SINE Alu 1 306 -6 3260 207 25 31 chr17 63901787 63901850 -21536630 + L1ME1 LINE L1 4437 4499 -1647 1878 141 41 10 chr17 63901850 63902140 -21536340 + AluSx SINE Alu 1 299 -13 3260 207 25 31 chr17 63902140 63902595 -21535885 + L1ME1 LINE L1 4499 4956 -1190 1989 144 0 16 chr17 63902595 63902908 -21535572 + AluSq SINE Alu 4 311 -2 3260 207 25 31 chr17 63902908 63903062 -21535418 + L1ME1 LINE L1 4956 5109 -1037 1970 142 3 0 chr17 63903069 63903351 -21535129 + AluJo SINE Alu 5 287 -25 1332 211 104 3 chr17 63903374 63903710 -21534770 + L1ME1 LINE L1 5785 6154 -12 267 291 64 27 chr17 63904159 63904269 -21534211 - MER20B DNA MER1_type -641 142 29 327 289 141 8 chr17 63904325 63904453 -21534027 + MIR3 SINE MIR 23 167 -41 1949 162 3 7 chr17 63904513 63904821 -21533659 + AluJb SINE Alu 1 307 -5 2337 108 0 10 chr17 63906940 63907254 -21531226 - AluSq SINE Alu -2 311 1 614 247 42 72 chr17 63907711 63908153 -21530327 - LTR33A LTR ERVL -12 511 2 214 327 9 0 chr17 63908843 63908904 -21529576 + CT-rich Low_complexity Low_complexity 1 65 -43 2080 116 14 7 chr17 63908904 63909198 -21529282 - AluSc SINE Alu -13 296 1 214 327 9 0 chr17 63909198 63909243 -21529237 + CT-rich Low_complexity Low_complexity 65 108 0 966 197 28 19 chr17 63910212 63910425 -21528055 + MER20 DNA MER1_type 4 218 -1 2223 110 0 3 chr17 63910620 63910912 -21527568 + AluSc SINE Alu 1 291 -18 2284 84 10 7 chr17 63910912 63911211 -21527269 + AluY SINE Alu 1 300 -11 2464 79 0 10 chr17 63915566 63915869 -21522611 + AluY SINE Alu 5 304 -7 625 140 53 44 chr17 63917944 63918058 -21520422 + FLAM_A SINE Alu 1 115 -18 26 0 0 0 chr17 63918070 63918096 -21520384 + AT_rich Low_complexity Low_complexity 1 26 0 2373 104 3 0 chr17 63918127 63918435 -21520045 - AluSg SINE Alu 0 310 2 1008 90 19 19 chr17 63918437 63918593 -21519887 - L1PB2 LINE L1 0 6151 5996 364 303 187 20 chr17 63918713 63919031 -21519449 - L2 LINE L2 -212 3060 2694 2465 78 3 0 chr17 63919531 63919826 -21518654 - AluSp SINE Alu -16 297 2 366 202 41 0 chr17 63920021 63920107 -21518373 - MLT1I LTR MaLR -13 428 318 2190 111 0 29 chr17 63920111 63920418 -21518062 + AluSx SINE Alu 1 298 -14 230 239 76 54 chr17 63920510 63920602 -21517878 - MLT1J1 LTR MaLR -352 94 1 2554 186 81 48 chr17 63920833 63921478 -21517002 + LTR65 LTR ERV1 4 669 0 2307 97 0 3 chr17 63921570 63921869 -21516611 - AluY SINE Alu -13 298 1 653 160 16 58 chr17 63921869 63922047 -21516433 + L1MB8 LINE L1 5336 5489 -689 865 161 91 0 chr17 63922047 63922190 -21516290 + FRAM SINE Alu 9 164 -12 3480 148 56 12 chr17 63922195 63922839 -21515641 + L1MB8 LINE L1 5507 6178 0 1287 73 0 0 chr17 63922978 63923128 -21515352 - AluSq/x SINE Alu -162 150 1 23 0 0 0 chr17 63923140 63923163 -21515317 + AT_rich Low_complexity Low_complexity 1 23 0 470 221 241 0 chr17 63923173 63923318 -21515162 - MIR SINE MIR -52 210 31 189 0 0 0 chr17 63923349 63923370 -21515110 + (TC)n Simple_repeat Simple_repeat 2 22 0 2385 67 0 7 chr17 63923370 63923669 -21514811 - AluSg SINE Alu -13 297 1 2174 170 113 15 chr17 63927910 63928370 -21510110 - MLT1D LTR MaLR 0 505 1 181 268 175 31 chr17 63929251 63929348 -21509132 - MIR3 SINE MIR -87 121 11 197 275 188 0 chr17 63931249 63931329 -21507151 - MIR SINE MIR -116 146 52 190 97 97 0 chr17 63933082 63933113 -21505367 - MIR SINE MIR -70 192 159 1126 80 13 2 chr17 63933262 63933500 -21504980 - AluSc SINE Alu -17 292 2 2247 94 0 27 chr17 63933507 63933668 -21504812 - AluSx SINE Alu -18 294 143 2260 98 3 28 chr17 63933668 63933985 -21504495 - AluSg SINE Alu -1 309 1 2247 94 0 27 chr17 63933985 63934120 -21504360 - AluSx SINE Alu -169 143 6 536 284 7 21 chr17 63934202 63934343 -21504137 - MIR SINE MIR -109 153 15 182 268 0 0 chr17 63934681 63934722 -21503758 - L2 LINE L2 -81 3191 3151 231 181 153 42 chr17 63935354 63935426 -21503054 + MIR SINE MIR 183 262 0 454 270 26 9 chr17 63936097 63936212 -21502268 - MIR SINE MIR -62 146 30 23 33 0 0 chr17 63936222 63936252 -21502228 + AT_rich Low_complexity Low_complexity 1 30 0 430 141 16 0 chr17 63936419 63936483 -21501997 + AluJ/FLAM SINE Alu 2 66 -246 1738 119 86 19 chr17 63936767 63937035 -21501445 - AluJo SINE Alu -24 288 3 2010 222 87 34 chr17 63937979 63938542 -21499938 + MLT1E LTR MaLR 1 593 0 323 55 0 55 chr17 63939781 63939836 -21498644 - FAM SINE Alu -2 177 126 413 329 41 7 chr17 63939945 63940091 -21498389 - MIR SINE MIR -10 252 102 596 174 157 0 chr17 63940875 63940990 -21497490 - FLAM_A SINE Alu 0 133 1 241 192 0 0 chr17 63941068 63941120 -21497360 + L1MC4 LINE L1 6658 6709 -1333 1625 177 49 10 chr17 63941140 63941428 -21497052 + AluJb SINE Alu 1 299 -13 545 135 260 0 chr17 63941697 63941793 -21496687 - FLAM_C SINE Alu -12 121 1 2164 122 3 0 chr17 63941875 63942162 -21496318 - AluSx SINE Alu -22 290 3 269 331 6 14 chr17 63942680 63942819 -21495661 - MIR SINE MIR -70 192 34 688 148 0 9 chr17 63943073 63943181 -21495299 - FRAM SINE Alu -59 117 11 418 262 148 22 chr17 63943631 63943812 -21494668 + MIR SINE MIR 8 204 -58 1564 148 66 8 chr17 63946261 63946517 -21491963 + AluJo SINE Alu 1 271 -41 656 200 0 0 chr17 63946518 63946628 -21491852 - AluJo/FLAM SINE Alu -201 111 2 1256 122 0 0 chr17 63946817 63946981 -21491499 - AluSg/x SINE Alu -15 295 132 1930 146 30 13 chr17 63946981 63947283 -21491197 - AluSq SINE Alu -6 307 1 605 328 69 8 chr17 63947593 63947840 -21490640 + L3 LINE CR1 1220 1481 -96 919 305 76 23 chr17 63948148 63948581 -21489899 + L2 LINE L2 2029 2484 -830 2383 118 0 0 chr17 63948598 63948911 -21489569 - AluSq SINE Alu 0 313 1 498 179 0 32 chr17 63948914 63949009 -21489471 - FLAM_A SINE Alu -13 129 38 589 206 59 0 chr17 63949038 63949174 -21489306 - Charlie1 DNA MER1_type -1 2760 2617 836 219 61 35 chr17 63949203 63949358 -21489122 - Charlie1 DNA MER1_type -2525 236 72 2473 81 0 0 chr17 63949358 63949656 -21488824 + AluSc SINE Alu 1 298 -11 836 219 61 35 chr17 63949656 63949728 -21488752 - Charlie1 DNA MER1_type -2689 72 3 403 332 53 5 chr17 63949740 63949930 -21488550 + L2 LINE L2 2511 2709 -605 1906 166 0 13 chr17 63950077 63950385 -21488095 - AluSx SINE Alu -8 304 1 277 320 104 0 chr17 63950471 63950570 -21487910 + L2 LINE L2 3134 3250 -22 2029 149 0 3 chr17 63950570 63950866 -21487614 - AluJb SINE Alu -17 295 1 277 320 104 0 chr17 63950866 63950891 -21487589 + L2 LINE L2 3250 3271 -1 1778 128 69 0 chr17 63950939 63951213 -21487267 + AluSx SINE Alu 6 298 -14 200 378 98 0 chr17 63951622 63951786 -21486694 + L2 LINE L2 2889 3068 -204 1322 192 137 19 chr17 63952823 63953130 -21485350 - MER2 DNA MER2_type -1 343 1 230 164 16 49 chr17 63953336 63953397 -21485083 + L3 LINE CR1 1446 1504 -73 709 183 0 0 chr17 63954218 63954333 -21484147 - FLAM_A SINE Alu -18 115 1 1314 78 24 0 chr17 63955224 63955390 -21483090 + AluY SINE Alu 1 170 -141 1930 138 50 0 chr17 63955806 63956088 -21482392 + AluSx SINE Alu 1 296 -16 2282 105 3 13 chr17 63956257 63956572 -21481908 + AluSp SINE Alu 1 312 -1 1697 175 0 40 chr17 63956640 63956943 -21481537 + AluJb SINE Alu 1 291 -21 777 234 79 54 chr17 63957078 63957325 -21481155 + MER5C DNA MER1_type 1 259 -65 2352 89 10 0 chr17 63957325 63957627 -21480853 + AluSg SINE Alu 1 305 -5 777 234 79 54 chr17 63957627 63957695 -21480785 + MER5C DNA MER1_type 259 324 0 854 169 0 15 chr17 63957981 63958117 -21480363 + AluJo SINE Alu 1 134 -178 2395 103 0 3 chr17 63958117 63958427 -21480053 + AluSq SINE Alu 1 309 -4 1087 193 42 91 chr17 63959500 63959853 -21478627 - L1MB7 LINE L1 -22 6162 5827 1503 85 20 0 chr17 63960170 63960369 -21478111 + THE1C LTR MaLR 173 375 0 1894 170 0 7 chr17 63960528 63960834 -21477646 - AluSx SINE Alu -8 304 1 2054 129 0 3 chr17 63960914 63961208 -21477272 - AluSx SINE Alu -19 293 1 1511 185 40 20 chr17 63961370 63961667 -21476813 + AluJb SINE Alu 1 303 -9 3543 153 56 30 chr17 63961669 63961764 -21476716 + L1MB7 LINE L1 5433 5524 -660 2223 91 14 117 chr17 63961764 63962112 -21476368 + THE1C LTR MaLR 1 301 -74 1850 117 41 28 chr17 63962112 63962402 -21476078 - AluSg SINE Alu -16 294 1 2223 91 14 117 chr17 63962402 63962471 -21476009 + THE1C LTR MaLR 301 375 0 3543 153 56 30 chr17 63962471 63962988 -21475492 + L1MB7 LINE L1 5524 6070 -114 2151 130 0 7 chr17 63962988 63963288 -21475192 + AluJb SINE Alu 1 298 -14 3543 153 56 30 chr17 63963288 63963407 -21475073 + L1MB7 LINE L1 6070 6184 0 1480 101 44 4 chr17 63964907 63965135 -21473345 + L1PA11 LINE L1 5937 6173 -1 334 259 76 38 chr17 63965496 63965654 -21472826 + L1MC5 LINE L1 7762 7925 -36 401 282 184 0 chr17 63967418 63967581 -21470899 + MIR SINE MIR 67 259 -3 947 112 0 0 chr17 63967745 63967870 -21470610 - AluSg/x SINE Alu -15 295 171 247 264 58 23 chr17 63967870 63967957 -21470523 + L2 LINE L2 3224 3313 0 657 94 94 8 chr17 63968417 63968534 -21469946 - Charlie1 DNA MER1_type -34 2727 2601 2023 130 0 3 chr17 63968552 63968836 -21469644 + AluSx SINE Alu 6 288 -24 810 208 127 30 chr17 63968907 63969143 -21469337 - MIR SINE MIR -1 261 3 727 99 44 213 chr17 63969423 63969549 -21468931 - L1MC2 LINE L1 -2 7783 7637 1749 151 7 31 chr17 63969549 63969840 -21468640 - AluJb SINE Alu -28 284 1 727 99 44 213 chr17 63969840 63969986 -21468494 - L1MC2 LINE L1 -148 7637 6136 1669 122 13 0 chr17 63970116 63970345 -21468135 - AluSx SINE Alu -80 232 1 352 253 24 0 chr17 63971052 63971135 -21467345 + MIR SINE MIR 12 96 -166 351 100 0 0 chr17 63971135 63971185 -21467295 - MADE1 DNA Mariner 0 80 31 2343 85 17 0 chr17 63971188 63971481 -21466999 + AluSg SINE Alu 1 298 -12 406 288 79 0 chr17 63971501 63971640 -21466840 + MIR SINE MIR 101 250 -12 427 231 27 102 chr17 63971646 63971793 -21466687 - MER46C DNA MER2_type 0 338 203 228 179 0 0 chr17 63972008 63972047 -21466433 + MLT1J2 LTR MaLR 383 421 -29 627 207 0 130 chr17 63972080 63972288 -21466192 - MER46C DNA MER2_type -157 181 1 1066 174 0 0 chr17 63972423 63972590 -21465890 - FAM SINE Alu -8 167 1 24 53 0 0 chr17 63972956 63972994 -21465486 + AT_rich Low_complexity Low_complexity 1 38 0 238 355 47 6 chr17 63973361 63973533 -21464947 + L2 LINE L2 2889 3067 -205 1889 116 94 0 chr17 63973682 63973959 -21464521 - AluSx SINE Alu -9 303 1 24 53 0 0 chr17 63974487 63974525 -21463955 + AT_rich Low_complexity Low_complexity 1 38 0 225 302 10 31 chr17 63975221 63975317 -21463163 - MIR SINE MIR -81 181 88 1037 115 148 27 chr17 63977549 63977732 -21460748 - MER3 DNA MER1_type -4 205 1 1932 100 4 11 chr17 63979479 63979740 -21458740 - AluSx SINE Alu -15 297 39 2019 139 0 13 chr17 63980217 63980518 -21457962 - AluJo SINE Alu -15 297 1 198 103 0 0 chr17 63981409 63981438 -21457042 + (ACTG)n Simple_repeat Simple_repeat 4 32 0 1882 136 7 11 chr17 63981439 63981719 -21456761 - AluJb SINE Alu -33 279 1 1960 134 14 3 chr17 63982097 63982387 -21456093 + AluJb SINE Alu 1 293 -19 24 0 0 0 chr17 63982513 63982537 -21455943 + AT_rich Low_complexity Low_complexity 1 24 0 2175 110 3 7 chr17 63983299 63983600 -21454880 + AluSx SINE Alu 1 300 -12 462 288 59 24 chr17 63983666 63983836 -21454644 + MIR SINE MIR 87 262 0 2288 91 3 0 chr17 63984064 63984361 -21454119 + AluSp SINE Alu 1 298 -15 27 49 0 0 chr17 63984390 63984431 -21454049 + AT_rich Low_complexity Low_complexity 1 41 0 2221 117 0 3 chr17 63984518 63984816 -21453664 + AluSx SINE Alu 1 297 -15 939 143 0 7 chr17 63984840 63984980 -21453500 + AluJb SINE Alu 1 139 -173 2227 115 3 0 chr17 63984982 63985278 -21453202 + AluSx SINE Alu 1 297 -15 1368 95 0 0 chr17 64085521 64085690 -21352790 - AluSx SINE Alu -143 169 1 287 114 0 0 chr17 64085825 64085869 -21352611 - L2 LINE L2 -3 3310 3267 2243 36 0 0 chr17 64086040 64086287 -21352193 + L1PA3 LINE L1 5906 6152 -3 36 40 0 0 chr17 64086287 64086337 -21352143 + AT_rich Low_complexity Low_complexity 1 50 0 2057 158 0 0 chr17 64086484 64086794 -21351686 - AluSg SINE Alu 0 310 1 2089 86 0 4 chr17 64087024 64087293 -21351187 - AluY SINE Alu 0 311 44 1747 178 7 10 chr17 64087402 64087700 -21350780 + AluJo SINE Alu 1 297 -15 2157 126 3 0 chr17 64087844 64088145 -21350335 + AluSx SINE Alu 1 302 -10 757 24 0 0 chr17 64088571 64088656 -21349824 - AluY SINE Alu -224 86 2 1833 167 0 10 chr17 64088663 64088957 -21349523 - AluJb SINE Alu -21 291 1 2637 36 0 0 chr17 64089022 64089323 -21349157 - AluY SINE Alu -10 301 1 3051 137 13 27 chr17 64089474 64089948 -21348532 - MLT1C LTR MaLR 0 467 1 815 158 93 7 chr17 64090243 64090382 -21348098 - AluJb SINE Alu -3 309 159 2135 97 4 0 chr17 64090543 64090841 -21347639 - AluSg SINE Alu 0 299 1 380 302 147 16 chr17 64090844 64090973 -21347507 - MIR3 SINE MIR -61 147 2 208 93 23 23 chr17 64091146 64091189 -21347291 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 637 191 8 38 chr17 64091279 64091410 -21347070 - FAM SINE Alu -5 44 1 2116 143 0 0 chr17 64091435 64091735 -21346745 - AluSx SINE Alu -12 300 1 1657 154 25 68 chr17 64091741 64092066 -21346414 - AluJb SINE Alu -1 311 1 39 38 0 0 chr17 64092259 64092312 -21346168 + AT_rich Low_complexity Low_complexity 1 53 0 3709 149 28 51 chr17 64092431 64092661 -21345819 - L1MB8 LINE L1 -197 5981 5747 1877 135 46 0 chr17 64092661 64092943 -21345537 - AluSx SINE Alu -17 295 1 3709 149 28 51 chr17 64092943 64093296 -21345184 - L1MB8 LINE L1 -431 5747 5387 1683 190 41 54 chr17 64093296 64093664 -21344816 + MLT1A1 LTR MaLR 3 365 0 3709 149 28 51 chr17 64093664 64093698 -21344782 - L1MB8 LINE L1 -791 5387 5354 1899 174 0 0 chr17 64093698 64094024 -21344456 - AluSx SINE Alu 0 312 1 3709 149 28 51 chr17 64094024 64094144 -21344336 - L1MB8 LINE L1 -824 5354 5259 722 187 4 2 chr17 64095077 64095308 -21343172 + AluJ SINE Alu 16 301 -11 1787 150 3 19 chr17 64095792 64096105 -21342375 + AluJb SINE Alu 1 308 -4 350 130 37 0 chr17 64096508 64096562 -21341918 - U6 snRNA snRNA -51 56 1 1883 111 4 0 chr17 64096813 64097066 -21341414 + AluSx SINE Alu 1 254 -58 1055 81 7 0 chr17 64097166 64097302 -21341178 - AluSq/x SINE Alu -175 138 2 1557 183 21 0 chr17 64097411 64097700 -21340780 - AluJb SINE Alu -16 296 2 266 184 0 0 chr17 64097703 64097752 -21340728 - L1MB8 LINE L1 -860 5286 5238 546 261 53 5 chr17 64097779 64098015 -21340465 + L1ME4a LINE L1 5674 5925 -196 405 199 33 14 chr17 64098029 64098134 -21340346 + AluJ/FLAM SINE Alu 2 79 -233 441 70 35 0 chr17 64098195 64098283 -21340197 + AluJ/FRAM SINE Alu 224 313 0 2148 121 0 33 chr17 64098283 64098590 -21339890 + AluSx SINE Alu 1 297 -15 578 251 72 92 chr17 64099776 64099918 -21338562 + MIR SINE MIR 5 141 -121 2157 120 3 3 chr17 64099918 64100217 -21338263 + AluSx SINE Alu 1 299 -13 578 251 72 92 chr17 64100217 64100325 -21338155 + MIR SINE MIR 141 250 -12 2246 121 0 7 chr17 64100548 64100853 -21337627 + AluSx SINE Alu 1 303 -9 2209 116 0 3 chr17 64100863 64101164 -21337316 + AluSc SINE Alu 1 300 -9 487 224 104 31 chr17 64101181 64101373 -21337107 + L1MC4a LINE L1 7034 7239 -569 2086 135 0 0 chr17 64101375 64101671 -21336809 + AluSx SINE Alu 1 296 -16 304 281 21 0 chr17 64101671 64101760 -21336720 + L1MC4 LINE L1 7808 7901 -141 182 348 45 27 chr17 64101984 64102205 -21336275 - L2 LINE L2 -1228 2086 1862 1743 163 3 7 chr17 64102205 64102500 -21335980 + AluSx SINE Alu 1 294 -18 2379 90 0 0 chr17 64102502 64102803 -21335677 + AluY SINE Alu 1 301 -10 219 350 17 0 chr17 64102954 64103014 -21335466 + MIR SINE MIR 17 77 -185 214 216 34 114 chr17 64103017 64103105 -21335375 + MIR SINE MIR 44 124 -138 26 0 0 0 chr17 64103447 64103473 -21335007 + AT_rich Low_complexity Low_complexity 1 26 0 196 250 42 0 chr17 64104239 64104311 -21334169 + MIR SINE MIR 132 206 -56 1781 124 0 29 chr17 64104521 64104794 -21333686 + AluSx SINE Alu 30 294 -18 2095 33 0 0 chr17 64105101 64105342 -21333138 - AluY SINE Alu -70 241 1 1202 175 5 5 chr17 64105368 64105568 -21332912 - AluJo SINE Alu -108 204 5 2333 114 0 0 chr17 64106008 64106314 -21332166 + AluSx SINE Alu 1 306 -6 2257 102 0 7 chr17 64106351 64106644 -21331836 + AluSx SINE Alu 21 311 -1 691 187 0 37 chr17 64107063 64107197 -21331283 - FLAM_A SINE Alu -4 129 1 280 333 103 14 chr17 64107247 64107413 -21331067 + MIR SINE MIR 42 220 -42 1396 200 0 4 chr17 64109186 64109441 -21329039 + AluJb SINE Alu 5 258 -54 588 278 113 71 chr17 64109559 64110181 -21328299 - L1MC4a LINE L1 -1528 6280 5633 186 43 0 0 chr17 64110660 64110683 -21327797 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 781 141 16 8 chr17 64110688 64110809 -21327671 - FLAM_C SINE Alu -19 124 3 217 208 113 0 chr17 64110987 64111040 -21327440 + L2 LINE L2 3214 3272 0 2064 117 34 3 chr17 64111943 64112234 -21326246 - AluSq SINE Alu -13 300 1 2036 125 0 7 chr17 64112359 64112663 -21325817 - AluSq SINE Alu -11 302 1 2273 175 3 11 chr17 64112778 64113160 -21325320 + L1PA16 LINE L1 5786 6164 -2 27 29 0 0 chr17 64113479 64113513 -21324967 + AT_rich Low_complexity Low_complexity 1 34 0 369 228 63 0 chr17 64113527 64113606 -21324874 - L2 LINE L2 -17 3296 3213 283 257 0 79 chr17 64114265 64114366 -21324114 + MER5A DNA MER1_type 49 141 -48 315 0 0 0 chr17 64114625 64114647 -21323833 + (CA)n Simple_repeat Simple_repeat 1 57 0 315 0 0 0 chr17 64114647 64114682 -21323798 + (CA)n Simple_repeat Simple_repeat 2 36 0 1546 140 0 95 chr17 64114716 64115031 -21323449 - AluJb SINE Alu -27 285 1 826 142 0 0 chr17 64115235 64115348 -21323132 - FLAM_C SINE Alu -30 113 1 2424 60 0 17 chr17 64115510 64115812 -21322668 + AluY SINE Alu 1 297 -14 707 126 11 0 chr17 64117553 64117648 -21320832 + AluS SINE Alu 1 96 -217 562 243 43 16 chr17 64117858 64118043 -21320437 - L1MC5 LINE L1 -461 7500 7311 580 206 175 12 chr17 64118156 64118316 -21320164 + MER20 DNA MER1_type 33 218 -1 924 174 60 101 chr17 64118332 64118630 -21319850 - L1MC5 LINE L1 -770 7191 6906 1571 206 6 6 chr17 64118631 64118942 -21319538 - AluJb SINE Alu 0 312 2 386 237 64 45 chr17 64119000 64119156 -21319324 - L1MC4 LINE L1 -1073 6969 6811 198 0 0 0 chr17 64119631 64119653 -21318827 + (TA)n Simple_repeat Simple_repeat 2 23 0 2158 113 0 10 chr17 64119653 64119954 -21318526 - AluSg SINE Alu -12 298 1 1311 171 83 26 chr17 64120711 64120975 -21317505 - AluJb SINE Alu -8 304 26 3683 166 156 54 chr17 64121075 64121128 -21317352 - L1MC4 LINE L1 -8 8034 7988 2077 139 0 0 chr17 64121128 64121423 -21317057 + AluSg SINE Alu 2 296 -14 3683 166 156 54 chr17 64121423 64121514 -21316966 - L1MC4 LINE L1 -54 7988 7908 180 111 0 0 chr17 64121514 64121541 -21316939 + (CATA)n Simple_repeat Simple_repeat 2 28 0 3683 166 156 54 chr17 64121541 64121610 -21316870 - L1MC4 LINE L1 -134 7908 7847 1709 117 117 11 chr17 64121610 64121884 -21316596 - AluSg SINE Alu -7 303 1 3683 166 156 54 chr17 64121884 64122363 -21316117 - L1MC4 LINE L1 -195 7847 7418 2185 105 0 0 chr17 64122363 64122678 -21315802 - AluSx SINE Alu 0 315 1 3683 166 156 54 chr17 64122678 64122942 -21315538 - L1MC4 LINE L1 -624 7418 6976 2477 43 40 0 chr17 64123381 64123680 -21314800 - AluYa5 SINE Alu 0 311 1 642 217 22 65 chr17 64125583 64125767 -21312713 + L2 LINE L2 3138 3313 0 2109 99 46 3 chr17 64126968 64127252 -21311228 - AluSg SINE Alu -13 297 2 1118 183 195 57 chr17 64127276 64127392 -21311088 - AluJo SINE Alu -2 300 201 2062 142 0 0 chr17 64127392 64127687 -21310793 - AluSx SINE Alu -17 295 1 1118 183 195 57 chr17 64127687 64127832 -21310648 - AluJo SINE Alu -101 201 3 1127 237 16 0 chr17 64128542 64128795 -21309685 + MIR SINE MIR 3 259 -3 436 261 94 45 chr17 64129688 64129975 -21308505 - L1ME4a LINE L1 -246 5875 5575 754 246 103 18 chr17 64130047 64130271 -21308209 - MIR SINE MIR -11 251 9 404 271 106 87 chr17 64131162 64131532 -21306948 - L1ME4a LINE L1 -23 6098 5714 1089 204 41 23 chr17 64131532 64131752 -21306728 - MER58A DNA MER1_type 0 224 1 404 271 106 87 chr17 64131752 64131898 -21306582 - L1ME4a LINE L1 -407 5714 5572 4246 156 55 62 chr17 64132190 64133545 -21304935 - L1MA9 LINE L1 -3 6331 4873 347 49 39 0 chr17 64133551 64133608 -21304872 - MER41A LTR ERV1 -76 478 418 294 242 0 0 chr17 64133608 64133674 -21304806 - L1ME4a LINE L1 -1261 4885 4820 465 290 21 14 chr17 64133674 64133819 -21304661 - MIR SINE MIR -97 165 20 494 233 17 0 chr17 64133829 64133949 -21304531 - MER20 DNA MER1_type 0 219 98 456 287 35 14 chr17 64133977 64134120 -21304360 - MIR SINE MIR -70 192 47 181 147 0 0 chr17 64134720 64134754 -21303726 + MIR SINE MIR 123 156 -106 1867 155 3 7 chr17 64135054 64135358 -21303122 + AluJo SINE Alu 1 303 -9 291 264 25 16 chr17 64137501 64137622 -21300858 - MER113 DNA MER1_type? -380 141 20 324 283 0 42 chr17 64138046 64138166 -21300314 + L2 LINE L2 2458 2572 -742 550 228 39 106 chr17 64139055 64139227 -21299253 + L1MD3 LINE L1 7705 7848 -147 1708 147 0 33 chr17 64139227 64139526 -21298954 - AluJo SINE Alu -23 289 1 550 228 39 106 chr17 64139526 64139665 -21298815 + L1MD3 LINE L1 7848 7995 0 3218 150 37 47 chr17 64141487 64141781 -21296699 - L1P4 LINE L1 -412 5754 5459 2518 66 0 3 chr17 64141781 64142085 -21296395 + AluY SINE Alu 1 303 -8 3218 150 37 47 chr17 64142085 64142941 -21295539 - L1P4 LINE L1 -707 5459 4628 1537 186 0 58 chr17 64143130 64143425 -21295055 + AluJb SINE Alu 11 288 -24 279 0 0 0 chr17 64143432 64143463 -21295017 + (TA)n Simple_repeat Simple_repeat 1 31 0 232 244 33 22 chr17 64143467 64143557 -21294923 + L1MC4 LINE L1 6614 6704 -1338 200 86 29 0 chr17 64143579 64143614 -21294866 + (TA)n Simple_repeat Simple_repeat 1 36 0 1836 202 8 39 chr17 64143725 64144107 -21294373 - MLT1A2 LTR MaLR -4 370 1 23 54 0 0 chr17 64144352 64144389 -21294091 + AT_rich Low_complexity Low_complexity 1 37 0 191 382 45 0 chr17 64144980 64145090 -21293390 - L2 LINE L2 0 3272 3158 6344 107 20 0 chr17 64145516 64146456 -21292024 - L1PB1 LINE L1 -2 6149 5200 994 282 21 34 chr17 64146521 64146847 -21291633 - MLT1G1 LTR MaLR -187 408 87 201 121 0 0 chr17 64147083 64147116 -21291364 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 3487 184 1 13 chr17 64147116 64147838 -21290642 - L1 LINE L1 -1243 4903 4189 291 54 0 0 chr17 64148171 64148208 -21290272 + (CA)n Simple_repeat Simple_repeat 2 38 0 312 96 0 0 chr17 64149624 64149706 -21288774 + Alu SINE Alu 243 314 0 225 310 87 91 chr17 64149736 64149978 -21288502 - L2 LINE L2 -4 3268 3028 2045 191 126 131 chr17 64150192 64150671 -21287809 - L1 LINE L1 -2706 3440 2967 2167 117 17 0 chr17 64150671 64150969 -21287511 - AluSq SINE Alu -10 303 1 2045 191 126 131 chr17 64150969 64151436 -21287044 - L1 LINE L1 -3179 2967 2499 33 25 0 0 chr17 64151629 64151669 -21286811 + AT_rich Low_complexity Low_complexity 1 40 0 210 263 9 88 chr17 64151776 64151890 -21286590 - L2 LINE L2 -927 2387 2283 334 269 119 7 chr17 64152353 64152493 -21285987 + MIR SINE MIR 30 180 -67 1116 147 0 6 chr17 64152909 64153072 -21285408 + AluSg/x SINE Alu 128 289 -21 864 289 40 17 chr17 64156807 64157326 -21281154 - L1MC3 LINE L1 -1771 6014 5484 186 306 82 61 chr17 64162053 64162200 -21276280 + MIR SINE MIR 94 243 -19 1633 193 58 3 chr17 64163250 64163576 -21274904 - MER2 DNA MER2_type 0 344 1 183 80 0 0 chr17 64163655 64163680 -21274800 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 1408 179 112 29 chr17 64164030 64164370 -21274110 - THE1C LTR MaLR 0 375 8 413 71 0 0 chr17 64164555 64164611 -21273869 + AluSp/q SINE Alu 241 296 -17 1378 225 90 109 chr17 64164655 64164886 -21273594 - L1ME3A LINE L1 -104 6066 5832 2052 148 3 0 chr17 64164886 64165190 -21273290 - AluJb SINE Alu -7 305 1 1378 225 90 109 chr17 64165190 64165646 -21272834 - L1ME3A LINE L1 -338 5832 5392 2299 105 0 3 chr17 64165647 64165942 -21272538 - AluSg SINE Alu -16 294 1 1583 243 123 34 chr17 64165942 64166429 -21272051 - L1ME3A LINE L1 -981 5165 4594 458 17 17 0 chr17 64166429 64166488 -21271992 + (CA)n Simple_repeat Simple_repeat 1 60 0 1583 243 123 34 chr17 64166488 64166705 -21271775 - L1ME3A LINE L1 -1552 4594 4398 1088 212 113 63 chr17 64166749 64167131 -21271349 + MLT1C LTR MaLR 6 406 -61 632 91 34 0 chr17 64167134 64167222 -21271258 + AluY SINE Alu 2 92 -219 251 203 0 38 chr17 64167347 64167364 -21271116 + T-rich Low_complexity Low_complexity 5 21 -59 1564 157 33 0 chr17 64167364 64167638 -21270842 - L1MA6 LINE L1 -3 6297 6015 251 203 0 38 chr17 64167638 64167699 -21270781 + T-rich Low_complexity Low_complexity 21 80 0 18578 28 1 0 chr17 64167705 64170637 -21267843 - L1PA4 LINE L1 -8 6147 3213 3219 59 26 9 chr17 64170637 64171049 -21267431 - L1PA8 LINE L1 -1 6171 5739 1202 99 0 0 chr17 64171054 64171226 -21267254 - L1P3 LINE L1 -3240 3221 3050 * 9934 129 25 12 chr17 64171216 64172737 -21265743 - L1P3 LINE L1 -4911 1550 10 198 122 24 24 chr17 64172858 64172899 -21265581 + MER5A DNA MER1_type 149 189 0 1766 184 0 13 chr17 64173418 64173717 -21264763 - AluJo SINE Alu -17 295 1 972 178 0 0 chr17 64173742 64173894 -21264586 - AluJb SINE Alu -25 287 136 289 140 0 0 chr17 64175857 64175907 -21262573 - Alu SINE Alu 0 300 251 200 384 90 23 chr17 64176018 64176195 -21262285 + L2 LINE L2 569 757 -2557 402 383 64 6 chr17 64176195 64176506 -21261974 + L2 LINE L2 564 892 -2422 3617 153 19 2 chr17 64176859 64177454 -21261026 + L1PB4 LINE L1 5550 6154 -2 221 367 27 14 chr17 64177491 64177638 -21260842 + L2 LINE L2 1333 1481 -1833 2486 69 0 13 chr17 64177688 64177991 -21260489 - AluSq SINE Alu -14 299 1 317 329 56 69 chr17 64177991 64178413 -21260067 + L2 LINE L2 2274 2700 -614 1689 172 6 58 chr17 64178413 64178739 -21259741 - AluJb SINE Alu -2 310 2 317 329 56 69 chr17 64178739 64178866 -21259614 + L2 LINE L2 2700 2817 -497 2006 196 87 11 chr17 64178866 64179335 -21259145 - MLT1D LTR MaLR 0 505 1 317 329 56 69 chr17 64179335 64179376 -21259104 + L2 LINE L2 2817 2857 -457 1437 194 90 4 chr17 64179483 64179762 -21258718 - Tigger1 DNA MER2_type -2115 303 1 963 126 7 0 chr17 64179805 64179940 -21258540 + AluSq/x SINE Alu 1 136 -176 1584 154 73 0 chr17 64180358 64180617 -21257863 + AluSx SINE Alu 20 297 -15 1312 152 60 0 chr17 64180802 64181019 -21257461 + AluSg/x SINE Alu 65 294 -18 2300 63 42 3 chr17 64181024 64181311 -21257169 + AluY SINE Alu 1 298 -13 240 35 0 0 chr17 64181311 64181340 -21257140 + (GGGGA)n Simple_repeat Simple_repeat 4 32 0 2483 267 71 25 chr17 64181340 64181949 -21256531 - L2 LINE L2 -668 2646 1979 1277 240 141 36 chr17 64181949 64182390 -21256090 - LTR16C LTR ERVL -4 487 1 2483 267 71 25 chr17 64182390 64182701 -21255779 - L2 LINE L2 -1335 1979 1684 894 289 56 7 chr17 64182712 64182996 -21255484 - L2 LINE L2 -1942 1372 1075 322 278 41 0 chr17 64183118 64183215 -21255265 - HAL1 LINE L1 -861 1646 1546 2458 76 0 3 chr17 64183220 64183521 -21254959 - AluY SINE Alu -11 300 1 254 206 284 39 chr17 64183593 64183695 -21254785 - LTR50 LTR ERVL -383 412 286 709 200 140 0 chr17 64183698 64183848 -21254632 - LTR50 LTR ERVL -619 176 6 228 184 0 0 chr17 64184203 64184252 -21254228 + (CA)n Simple_repeat Simple_repeat 1 49 0 183 42 0 0 chr17 64184328 64184352 -21254128 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2134 114 4 0 chr17 64184358 64184639 -21253841 - AluSx SINE Alu -30 282 1 638 252 87 15 chr17 64184662 64185014 -21253466 - L1MEd LINE L1 -4864 1255 967 1762 162 7 40 chr17 64185161 64185464 -21253016 - AluSx SINE Alu -19 293 1 291 277 56 43 chr17 64185855 64185976 -21252504 - L1M4 LINE L1 -3210 2936 2808 1950 112 41 0 chr17 64185976 64186308 -21252172 - AluSc SINE Alu 0 343 1 291 277 56 43 chr17 64186308 64186416 -21252064 - L1M4 LINE L1 -3338 2808 2703 2205 113 3 0 chr17 64186460 64186752 -21251728 - AluSx SINE Alu -19 293 1 255 259 200 12 chr17 64186920 64187005 -21251475 - L2 LINE L2 -18 3254 3154 220 226 0 32 chr17 64187096 64187158 -21251322 + GA-rich Low_complexity Low_complexity 3 62 0 1702 177 0 7 chr17 64187345 64187633 -21250847 + AluJo SINE Alu 1 286 -26 312 70 0 0 chr17 64187636 64187679 -21250801 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 369 0 0 0 chr17 64187722 64187763 -21250717 + (CA)n Simple_repeat Simple_repeat 2 42 0 252 213 55 16 chr17 64187763 64187893 -21250587 + (TA)n Simple_repeat Simple_repeat 1 124 -413 2799 77 8 0 chr17 64187893 64188245 -21250235 + THE1A LTR MaLR 1 355 0 252 213 55 16 chr17 64188245 64188280 -21250200 + (TA)n Simple_repeat Simple_repeat 124 537 0 208 337 0 12 chr17 64188792 64188878 -21249602 + GA-rich Low_complexity Low_complexity 1 85 0 185 233 70 0 chr17 64189228 64189271 -21249209 - L2 LINE L2 -5 3308 3263 257 233 103 27 chr17 64189418 64189564 -21248916 - L1ME LINE L1 -223 5898 5742 24 0 0 0 chr17 64189703 64189727 -21248753 + AT_rich Low_complexity Low_complexity 1 24 0 662 131 190 15 chr17 64189834 64189971 -21248509 + FRAM SINE Alu 9 169 -7 2402 99 51 25 chr17 64189994 64190349 -21248131 - THE1B LTR MaLR 0 364 1 317 100 0 0 chr17 64190575 64190615 -21247865 + AluSp/q SINE Alu 214 253 -50 25 0 0 0 chr17 64190619 64190644 -21247836 + AT_rich Low_complexity Low_complexity 1 25 0 734 242 6 0 chr17 64190644 64190826 -21247654 - Charlie4 DNA MER1_type -1705 256 74 836 156 0 15 chr17 64190835 64190970 -21247510 + FLAM_C SINE Alu 1 133 0 30 0 0 24 chr17 64190970 64190983 -21247497 + AT_rich Low_complexity Low_complexity 1 13 -27 2353 92 0 0 chr17 64190983 64191277 -21247203 + AluY SINE Alu 1 294 -17 30 0 0 24 chr17 64191277 64191304 -21247176 + AT_rich Low_complexity Low_complexity 13 40 0 1156 170 9 13 chr17 64191493 64191717 -21246763 - L1MB8 LINE L1 0 6178 5956 14578 153 31 34 chr17 64193085 64194366 -21244114 - L1PB1 LINE L1 0 6867 5583 804 115 98 0 chr17 64194366 64194488 -21243992 - AluSq/x SINE Alu -179 134 1 14578 153 31 34 chr17 64194488 64197258 -21241222 - L1PB1 LINE L1 -1284 5583 2730 222 37 0 0 chr17 64197258 64197285 -21241195 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 14578 153 31 34 chr17 64197285 64197809 -21240671 - L1PB1 LINE L1 -4137 2730 2206 1406 168 4 8 chr17 64197809 64198047 -21240433 + AluJo SINE Alu 61 297 -15 2460 93 3 0 chr17 64198052 64198362 -21240118 + AluSp SINE Alu 1 311 -2 2189 107 18 0 chr17 64198566 64198888 -21239592 + AluSq SINE Alu 1 327 0 259 261 52 26 chr17 64199152 64199267 -21239213 - L1MC4 LINE L1 -6 8036 7919 183 129 0 0 chr17 64199270 64199301 -21239179 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1240 137 0 0 chr17 64199701 64199876 -21238604 - AluSg/x SINE Alu -11 299 125 1359 99 0 5 chr17 64199884 64200075 -21238405 - AluSg/x SINE Alu 0 312 123 21 89 0 0 chr17 64200075 64200131 -21238349 + AT_rich Low_complexity Low_complexity 1 56 0 1323 174 0 5 chr17 64200161 64200380 -21238100 - AluSx SINE Alu -94 218 1 1702 140 47 4 chr17 64201362 64201640 -21236840 + AluJo SINE Alu 1 290 -22 2348 81 3 0 chr17 64201782 64202101 -21236379 - AluSq SINE Alu 0 320 1 2212 94 42 0 chr17 64202412 64202699 -21235781 + AluSg SINE Alu 1 299 -11 1468 172 0 0 chr17 64203580 64203801 -21234679 + AluJo SINE Alu 6 226 -86 522 306 48 39 chr17 64204562 64204895 -21233585 + L1MC/D LINE L1 5254 5589 -2219 371 274 82 22 chr17 64204969 64205104 -21233376 + MIR3 SINE MIR 49 191 -17 38854 82 12 17 chr17 64205225 64211427 -21227053 + L1PA8 LINE L1 3 6171 -1 24 32 0 0 chr17 64211505 64211536 -21226944 + AT_rich Low_complexity Low_complexity 1 31 0 628 179 83 6 chr17 64211638 64211794 -21226686 - Charlie4 DNA MER1_type 0 1961 1794 1499 107 5 0 chr17 64211839 64212035 -21226445 - AluSg/x SINE Alu -15 295 99 333 202 0 64 chr17 64212138 64212247 -21226233 + L1MEc LINE L1 789 890 -5506 1165 158 0 0 chr17 64212257 64212422 -21226058 + AluSx SINE Alu 11 175 -137 1817 156 131 6 chr17 64212525 64212884 -21225596 - LTR64 LTR ERVK -154 404 1 237 202 191 45 chr17 64213894 64213983 -21224497 - MIR SINE MIR -128 134 33 319 281 129 0 chr17 64215848 64215987 -21222493 + MIR SINE MIR 106 262 0 769 41 20 10 chr17 64216816 64216949 -21221531 - L1PA10 LINE L1 0 6168 6059 224 382 29 0 chr17 64218153 64218255 -21220225 - MIR SINE MIR -98 164 60 2887 188 60 8 chr17 64221003 64221589 -21216891 - MER45B DNA AcHobo -200 840 225 561 233 17 0 chr17 64221586 64221706 -21216774 - MER45B DNA AcHobo -917 123 2 * 1318 139 279 18 chr17 64222367 64222647 -21215833 + Tigger7 DNA MER2_type 2135 2487 0 320 308 96 0 chr17 64222717 64222863 -21215617 + MIR SINE MIR 43 202 -60 359 245 41 10 chr17 64223471 64223569 -21214911 - Charlie4 DNA MER1_type 0 1961 1861 21 57 0 0 chr17 64225513 64225548 -21212932 + AT_rich Low_complexity Low_complexity 1 35 0 308 301 59 54 chr17 64225746 64225932 -21212548 + MER5A DNA MER1_type 1 187 -2 187 283 17 33 chr17 64227014 64227074 -21211406 - L2 LINE L2 -95 3177 3119 1707 200 10 0 chr17 64227260 64227565 -21210915 - AluJo SINE Alu -4 308 1 394 320 33 0 chr17 64228106 64228256 -21210224 - MIR3 SINE MIR -1 207 53 2649 55 0 0 chr17 64228449 64228758 -21209722 + AluY SINE Alu 1 309 -2 52 57 0 9 chr17 64229334 64229406 -21209074 + AT_rich Low_complexity Low_complexity 1 73 -31 899 224 12 0 chr17 64229406 64229571 -21208909 - FAM SINE Alu -8 167 1 52 57 0 9 chr17 64229571 64229603 -21208877 + AT_rich Low_complexity Low_complexity 73 104 0 2132 133 3 0 chr17 64229603 64229889 -21208591 + AluSx SINE Alu 1 287 -25 414 223 7 4 chr17 64230073 64230177 -21208303 - MIR SINE MIR -53 155 51 617 167 0 23 chr17 64230424 64230556 -21207924 - L1MB3 LINE L1 -3 6180 6052 2174 120 0 7 chr17 64230563 64230863 -21207617 - AluSp SINE Alu -15 298 1 313 210 65 0 chr17 64230875 64230937 -21207543 - L2 LINE L2 -1 3271 3206 1998 135 10 3 chr17 64231616 64231913 -21206567 - AluSx SINE Alu -13 299 1 2158 118 7 0 chr17 64231944 64232232 -21206248 - AluSg SINE Alu -20 290 1 2399 84 0 3 chr17 64232411 64232708 -21205772 - AluSq SINE Alu -17 296 1 1968 89 100 4 chr17 64232885 64233166 -21205314 + AluY SINE Alu 1 308 -3 2571 69 0 0 chr17 64233925 64234228 -21204252 - AluY SINE Alu -8 303 1 2080 103 0 20 chr17 64234276 64234568 -21203912 - AluSc SINE Alu -23 286 1 2266 96 3 3 chr17 64235120 64235423 -21203057 + AluSg SINE Alu 1 303 -7 966 102 0 0 chr17 64235494 64235621 -21202859 + AluSg/x SINE Alu 150 276 -36 402 105 0 0 chr17 64235722 64235779 -21202701 - AluSg/x SINE Alu -66 236 180 699 179 0 0 chr17 64235779 64235896 -21202584 + AluSg/x SINE Alu 164 280 -32 261 0 0 0 chr17 64235899 64235928 -21202552 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2084 109 0 30 chr17 64236115 64236418 -21202062 + AluSx SINE Alu 1 294 -18 24 67 0 0 chr17 64237415 64237460 -21201020 + GC_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr17 64237650 64237671 -21200809 + GC_rich Low_complexity Low_complexity 1 21 0 238 309 0 0 chr17 64238000 64238084 -21200396 + C-rich Low_complexity Low_complexity 1 84 0 39 22 0 0 chr17 64238328 64238374 -21200106 + GC_rich Low_complexity Low_complexity 1 46 0 27 29 0 0 chr17 64238443 64238477 -21200003 + GC_rich Low_complexity Low_complexity 1 34 0 180 0 0 0 chr17 64238584 64238604 -21199876 + (CGG)n Simple_repeat Simple_repeat 3 22 0 2325 88 0 10 chr17 64241267 64241564 -21196916 - AluSq SINE Alu -19 294 1 2171 122 0 7 chr17 64241764 64242067 -21196413 - AluSx SINE Alu -11 301 1 313 210 65 0 chr17 64242079 64242141 -21196339 - L2 LINE L2 -1 3271 3206 1998 135 10 3 chr17 64242821 64243118 -21195362 - AluSx SINE Alu -13 299 1 2158 118 7 0 chr17 64243149 64243437 -21195043 - AluSg SINE Alu -20 290 1 1325 86 0 0 chr17 64243616 64243779 -21194701 - AluSq SINE Alu -17 296 134 1737 167 27 0 chr17 64243779 64244072 -21194408 - AluSq SINE Alu -12 301 1 261 0 0 0 chr17 64244259 64244288 -21194192 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1982 117 0 11 chr17 64244291 64244572 -21193908 - AluSg SINE Alu -32 278 1 2134 136 0 7 chr17 64244594 64244902 -21193578 + AluSx SINE Alu 1 306 -6 22 18 0 55 chr17 64244903 64244914 -21193566 + AT_rich Low_complexity Low_complexity 1 11 -41 2335 62 3 7 chr17 64244914 64245204 -21193276 + AluY SINE Alu 1 289 -22 22 18 0 55 chr17 64245204 64245229 -21193251 + AT_rich Low_complexity Low_complexity 11 36 -16 1921 112 11 14 chr17 64245229 64245515 -21192965 + AluSg SINE Alu 1 285 -25 22 18 0 55 chr17 64245515 64245532 -21192948 + AT_rich Low_complexity Low_complexity 36 52 0 545 153 0 0 chr17 64245814 64245899 -21192581 - AluSg/x SINE Alu -16 294 210 746 197 0 29 chr17 64245909 64246046 -21192434 + FLAM_A SINE Alu 1 133 0 1499 166 16 66 chr17 64246048 64246165 -21192315 + AluJb SINE Alu 1 122 -190 2186 94 10 10 chr17 64246165 64246472 -21192008 + AluY SINE Alu 1 307 -4 1499 166 16 66 chr17 64246472 64246496 -21191984 + AluJb SINE Alu 122 146 -166 2309 91 0 7 chr17 64246496 64246803 -21191677 + AluY SINE Alu 1 305 -6 868 226 11 0 chr17 64246803 64246980 -21191500 + AluJb SINE Alu 126 304 -8 731 191 99 6 chr17 64247031 64247193 -21191287 - MER58A DNA MER1_type -46 178 2 1020 158 27 11 chr17 64247195 64247379 -21191101 - MER5A DNA MER1_type -2 187 1 2183 112 0 0 chr17 64248121 64248417 -21190063 - AluY SINE Alu -15 296 1 2465 70 0 25 chr17 64248669 64248985 -21189495 + AluY SINE Alu 2 309 -2 498 300 111 25 chr17 64249651 64249873 -21188607 + MIR SINE MIR 1 240 -22 1500 151 102 39 chr17 64250040 64250325 -21188155 + AluJo SINE Alu 1 303 -9 1988 132 0 7 chr17 64250330 64250617 -21187863 + AluSx SINE Alu 1 285 -27 369 0 0 0 chr17 64250621 64250662 -21187818 + (CA)n Simple_repeat Simple_repeat 1 41 0 2336 100 0 3 chr17 64250675 64250976 -21187504 + AluSg SINE Alu 1 300 -10 2335 86 10 19 chr17 64251249 64251562 -21186918 - AluSp SINE Alu 0 313 4 2287 110 3 0 chr17 64251580 64251890 -21186590 - AluY SINE Alu 0 311 1 2209 121 0 10 chr17 64251928 64252233 -21186247 - AluSx SINE Alu -10 302 1 382 49 0 183 chr17 64252325 64252377 -21186103 - MER41B LTR ERV1 -88 547 514 2381 80 0 13 chr17 64252377 64252678 -21185802 + AluSg1 SINE Alu 2 298 -11 382 49 0 183 chr17 64252678 64252707 -21185773 - MER41B LTR ERV1 -121 514 481 325 234 26 0 chr17 64252798 64252875 -21185605 - MIR3 SINE MIR -32 176 98 2291 71 21 0 chr17 64253334 64253617 -21184863 - AluY SINE Alu -22 289 1 2478 82 0 0 chr17 64253619 64253925 -21184555 - AluSx SINE Alu -5 307 2 1167 79 0 0 chr17 64253927 64254066 -21184414 - AluSq/x SINE Alu -169 143 5 990 130 6 25 chr17 64254073 64254234 -21184246 - AluSg/x SINE Alu -20 290 133 189 0 0 0 chr17 64254234 64254255 -21184225 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2364 72 0 7 chr17 64254257 64254548 -21183932 - AluSq SINE Alu -24 289 1 377 250 167 38 chr17 64254565 64254829 -21183651 - L1MC4 LINE L1 -10 8032 7735 788 161 67 20 chr17 64254829 64254978 -21183502 + FRAM SINE Alu 1 156 -20 244 206 0 0 chr17 64254980 64255043 -21183437 - L1MC4 LINE L1 -291 7751 7689 864 140 7 7 chr17 64255063 64255199 -21183281 - FRAM SINE Alu -18 158 23 181 363 49 0 chr17 64255273 64255375 -21183105 + L2 LINE L2 1821 1927 -1387 2171 104 40 0 chr17 64255384 64255682 -21182798 + AluSq SINE Alu 2 311 -2 261 306 183 37 chr17 64255796 64256473 -21182007 + L2 LINE L2 2201 2976 -338 377 152 0 0 chr17 64256715 64256781 -21181699 + ORSL DNA AcHobo 167 232 -43 1033 146 37 0 chr17 64257123 64257287 -21181193 - AluY SINE Alu -9 302 133 2126 107 0 55 chr17 64257287 64257475 -21181005 - AluSx SINE Alu -2 310 146 2478 68 0 0 chr17 64257475 64257769 -21180711 - AluY SINE Alu -17 294 1 2126 107 0 55 chr17 64257769 64257908 -21180572 - AluSx SINE Alu -166 146 1 2190 123 3 3 chr17 64257918 64258218 -21180262 - AluSx SINE Alu -12 300 1 192 327 47 19 chr17 64258223 64258330 -21180150 - MIR SINE MIR -107 155 46 278 337 28 22 chr17 64258338 64258519 -21179961 - L2 LINE L2 -950 2364 2183 408 240 23 39 chr17 64258813 64258942 -21179538 - L2 LINE L2 -7 3306 3180 2124 118 17 0 chr17 64258990 64259278 -21179202 + AluSq SINE Alu 1 293 -20 390 187 19 19 chr17 64259278 64259385 -21179095 + GA-rich Low_complexity Low_complexity 1 107 0 913 128 0 0 chr17 64259597 64259722 -21178758 + AluSq SINE Alu 117 241 -72 236 307 0 53 chr17 64259736 64259757 -21178723 + GA-rich Low_complexity Low_complexity 3 24 -86 1471 169 24 82 chr17 64259757 64260088 -21178392 + AluJo SINE Alu 1 312 0 236 307 0 53 chr17 64260088 64260180 -21178300 + GA-rich Low_complexity Low_complexity 24 110 0 371 213 0 25 chr17 64260188 64260268 -21178212 - MER45A DNA AcHobo 0 178 101 2370 98 0 16 chr17 64260271 64260408 -21178072 + AluSx SINE Alu 1 139 -173 2234 107 0 10 chr17 64260408 64260731 -21177749 + AluSg SINE Alu 1 310 0 2370 98 0 16 chr17 64260731 64260909 -21177571 + AluSx SINE Alu 139 311 -1 1021 71 0 101 chr17 64260925 64261094 -21177386 + AluSg/x SINE Alu 159 310 0 299 207 219 0 chr17 64261116 64261198 -21177282 - MER45A DNA AcHobo -71 107 8 2408 52 23 33 chr17 64261247 64261552 -21176928 + AluY SINE Alu 3 304 -7 364 259 36 18 chr17 64261933 64262045 -21176435 + MIR SINE MIR 76 189 -73 2114 122 0 7 chr17 64262546 64262842 -21175638 + AluJb SINE Alu 1 294 -18 368 224 24 0 chr17 64263217 64263302 -21175178 - MER113 DNA MER1_type? -231 290 204 661 152 0 139 chr17 64263309 64263474 -21175006 - FLAM_C SINE Alu 0 143 2 254 218 39 97 chr17 64263481 64263561 -21174919 - MER113 DNA MER1_type? -322 199 116 2325 92 3 7 chr17 64263561 64263867 -21174613 + AluSc SINE Alu 1 305 -4 254 218 39 97 chr17 64263867 64263900 -21174580 - MER113 DNA MER1_type? -405 116 83 1771 111 50 54 chr17 64263900 64264197 -21174283 - AluSx SINE Alu -16 296 1 254 218 39 97 chr17 64264197 64264288 -21174192 - MER113 DNA MER1_type? -438 83 6 2086 126 0 3 chr17 64264794 64265080 -21173400 - AluSx SINE Alu -27 285 1 1950 137 49 0 chr17 64265080 64265365 -21173115 - AluSq SINE Alu -10 303 5 192 200 0 0 chr17 64265554 64265594 -21172886 + CT-rich Low_complexity Low_complexity 3 42 0 1225 115 11 0 chr17 64265596 64265770 -21172710 - AluSg/x SINE Alu -7 305 130 1858 149 35 3 chr17 64265773 64266130 -21172350 - AluJo SINE Alu 0 366 1 2115 89 30 26 chr17 64267136 64267438 -21171042 - AluSx SINE Alu -9 303 1 1778 128 84 0 chr17 64267973 64268247 -21170233 + AluJb SINE Alu 1 297 -15 1753 204 186 2 chr17 64268269 64268779 -21169701 + L1MC4 LINE L1 7048 7651 -391 2137 113 19 10 chr17 64268783 64268963 -21169517 - AluSq SINE Alu 0 313 127 2399 90 7 0 chr17 64268963 64269264 -21169216 - AluSp SINE Alu -10 303 1 2137 113 19 10 chr17 64269264 64269393 -21169087 - AluSq SINE Alu -186 127 1 2117 129 10 0 chr17 64269808 64270111 -21168369 + AluSx SINE Alu 1 306 -6 1916 142 82 3 chr17 64270320 64270638 -21167842 + MER7A DNA MER2_type 1 341 -5 2153 122 17 0 chr17 64272263 64272557 -21165923 + AluSx SINE Alu 1 299 -13 262 181 87 14 chr17 64272841 64272979 -21165501 + (TA)n Simple_repeat Simple_repeat 1 148 0 843 191 29 20 chr17 64276397 64276547 -21161933 + MER3 DNA MER1_type 1 155 -54 1659 189 10 0 chr17 64276547 64276838 -21161642 - AluJb SINE Alu -18 294 1 843 191 29 20 chr17 64276838 64276891 -21161589 + MER3 DNA MER1_type 155 206 -3 853 158 5 97 chr17 64277335 64277531 -21160949 - AluJo SINE Alu -121 191 14 2056 103 4 0 chr17 64277588 64277875 -21160605 - AluSx SINE Alu 0 309 22 25 0 0 0 chr17 64277878 64277903 -21160577 + AT_rich Low_complexity Low_complexity 1 25 0 1921 113 0 12 chr17 64277914 64278170 -21160310 + AluSx SINE Alu 1 253 -59 25 0 0 0 chr17 64278174 64278199 -21160281 + AT_rich Low_complexity Low_complexity 1 25 0 862 203 7 114 chr17 64278199 64278390 -21160090 - Charlie4 DNA MER1_type -252 256 46 836 156 0 15 chr17 64278390 64278525 -21159955 + FLAM_C SINE Alu 1 133 0 862 203 7 114 chr17 64278525 64278538 -21159942 - Charlie4 DNA MER1_type -462 46 33 2482 76 0 0 chr17 64278538 64278841 -21159639 + AluY SINE Alu 1 303 -8 862 203 7 114 chr17 64278841 64278916 -21159564 - Charlie4 DNA MER1_type -475 33 6 362 293 56 10 chr17 64278918 64279116 -21159364 + L2 LINE L2 697 903 -2411 2215 92 23 23 chr17 64279329 64279624 -21158856 + AluSg SINE Alu 1 298 -12 438 20 0 0 chr17 64279624 64279675 -21158805 + (CA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr17 64279777 64279802 -21158678 + AT_rich Low_complexity Low_complexity 1 25 0 3623 294 95 31 chr17 64279998 64281023 -21157457 + L2 LINE L2 905 1864 -1449 2177 116 0 7 chr17 64281023 64281325 -21157155 + AluJb SINE Alu 1 300 -12 3623 294 95 31 chr17 64281325 64282564 -21155916 + L2 LINE L2 1864 3311 -2 2271 118 3 3 chr17 64282790 64283095 -21155385 + AluSx SINE Alu 1 305 -7 749 22 0 0 chr17 64283412 64283502 -21154978 + L1PA2 LINE L1 6066 6155 0 284 302 0 0 chr17 64283592 64283678 -21154802 + L1ME LINE L1 5578 5663 -458 2291 116 0 3 chr17 64284411 64284713 -21153767 + AluSq SINE Alu 1 301 -12 581 217 99 25 chr17 64284784 64284844 -21153636 - MER5A DNA MER1_type -6 183 129 1821 178 0 23 chr17 64284844 64285153 -21153327 + AluJo SINE Alu 1 302 -10 581 217 99 25 chr17 64285153 64285253 -21153227 - MER5A DNA MER1_type -60 129 11 2356 82 3 10 chr17 64285312 64285618 -21152862 + AluSx SINE Alu 2 305 -7 358 333 18 9 chr17 64286023 64286137 -21152343 - L2 LINE L2 0 3272 3158 1998 116 0 35 chr17 64286310 64286620 -21151860 - AluJb SINE Alu -13 299 1 2018 138 7 3 chr17 64287038 64287335 -21151145 + AluSx SINE Alu 1 298 -14 1714 139 7 32 chr17 64287371 64287651 -21150829 + AluJb SINE Alu 2 274 -38 23 33 0 0 chr17 64287914 64287944 -21150536 + AT_rich Low_complexity Low_complexity 1 30 0 296 250 9 26 chr17 64287973 64288089 -21150391 - L1ME4a LINE L1 -3 6118 6005 2380 100 0 0 chr17 64288218 64288518 -21149962 + AluSx SINE Alu 1 300 -12 1802 187 0 3 chr17 64288871 64289170 -21149310 + AluJb SINE Alu 2 299 -13 185 182 0 0 chr17 64289585 64289618 -21148862 + L2 LINE L2 3271 3303 -10 242 256 0 70 chr17 64289856 64289985 -21148495 + CT-rich Low_complexity Low_complexity 1 120 0 2125 97 32 0 chr17 64290230 64290509 -21147971 + AluSx SINE Alu 1 288 -24 1360 207 3 33 chr17 64292455 64292754 -21145726 + AluJo SINE Alu 1 290 -22 1557 57 0 38 chr17 64292763 64292973 -21145507 + L1PA7 LINE L1 5950 6151 -3 468 272 7 0 chr17 64293043 64293179 -21145301 + L1M4 LINE L1 5161 5297 -849 1765 158 27 10 chr17 64293179 64293476 -21145004 + AluJb SINE Alu 1 302 -10 2221 111 3 7 chr17 64294043 64294341 -21144139 - AluSx SINE Alu -15 297 1 3659 33 0 0 chr17 64295037 64295463 -21143017 - L1PA4 LINE L1 0 6155 5730 2208 112 65 29 chr17 64296357 64296741 -21141739 - L1MA9 LINE L1 -46 6266 5869 410 113 16 16 chr17 64297144 64297206 -21141274 + U7 snRNA snRNA 2 63 0 2295 104 0 0 chr17 64297233 64297521 -21140959 + AluSc SINE Alu 1 288 -21 474 254 169 0 chr17 64298145 64298275 -21140205 + L3 LINE CR1 1415 1566 -11 1598 167 87 11 chr17 64298393 64298669 -21139811 + AluJb SINE Alu 1 297 -15 2469 137 22 3 chr17 64298783 64299142 -21139338 + MER47A DNA MER2_type 1 366 0 1735 200 7 0 chr17 64299201 64299506 -21138974 + AluJb SINE Alu 1 307 -5 2389 82 0 25 chr17 64299750 64300066 -21138414 - AluY SINE Alu -3 308 1 26 50 0 0 chr17 64300162 64300202 -21138278 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr17 64300228 64300256 -21138224 + AT_rich Low_complexity Low_complexity 1 28 0 535 250 0 16 chr17 64300690 64300814 -21137666 + MIR SINE MIR 29 150 -112 1870 159 0 23 chr17 64300823 64301131 -21137349 - AluJo SINE Alu -11 301 1 389 279 108 132 chr17 64301830 64301963 -21136517 - L2 LINE L2 0 3272 3137 2289 81 0 20 chr17 64301963 64302261 -21136219 + AluSx SINE Alu 2 293 -19 389 279 108 132 chr17 64302261 64302536 -21135944 - L2 LINE L2 -135 3137 2874 461 176 24 0 chr17 64302647 64302732 -21135748 - MER74A LTR ERVL -462 96 10 2393 190 33 46 chr17 64302966 64303508 -21134972 - MER74A LTR ERVL -14 544 10 574 238 73 7 chr17 64303583 64303734 -21134746 + L2 LINE L2 1337 1497 -1817 586 102 7 80 chr17 64303747 64303842 -21134638 + L1MC3 LINE L1 6937 7037 -748 191 61 30 0 chr17 64303842 64303875 -21134605 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2133 60 0 0 chr17 64303877 64304125 -21134355 - AluY SINE Alu -63 248 1 586 102 7 80 chr17 64304125 64304163 -21134317 + L1MC3 LINE L1 7038 7063 -722 888 303 62 9 chr17 64304164 64304484 -21133996 - L2 LINE L2 -1556 1758 1422 409 302 154 6 chr17 64304514 64304683 -21133797 + L2 LINE L2 3113 3306 -7 200 274 120 51 chr17 64304659 64304776 -21133704 - L2 LINE L2 -7 3306 3182 * 2232 180 132 68 chr17 64305065 64305649 -21132831 - MLT1E2 LTR MaLR -3 623 3 436 174 13 20 chr17 64306119 64306268 -21132212 + (TA)n Simple_repeat Simple_repeat 2 149 0 230 211 0 137 chr17 64306272 64306367 -21132113 + L1MC4 LINE L1 6614 6695 -1347 2511 64 0 0 chr17 64306680 64306976 -21131504 - AluY SINE Alu -15 296 1 192 252 76 59 chr17 64307042 64307161 -21131319 + L2 LINE L2 2530 2650 -664 25 0 0 0 chr17 64307531 64307556 -21130924 + AT_rich Low_complexity Low_complexity 1 25 0 2477 70 3 0 chr17 64307991 64308292 -21130188 - AluY SINE Alu -9 302 1 21 0 0 0 chr17 64308344 64308365 -21130115 + AT_rich Low_complexity Low_complexity 1 21 0 664 199 90 19 chr17 64310099 64310255 -21128225 + MIR SINE MIR 96 262 0 2392 97 0 3 chr17 64310312 64310623 -21127857 + AluSg SINE Alu 1 310 0 1319 203 58 7 chr17 64310650 64310941 -21127539 + AluJo SINE Alu 1 306 -6 558 275 115 0 chr17 64310956 64311138 -21127342 - MIR SINE MIR -58 204 2 659 133 0 0 chr17 64311311 64311401 -21127079 + AluJb SINE Alu 35 124 -188 2370 82 7 7 chr17 64311782 64312086 -21126394 + AluSq SINE Alu 1 304 -9 2127 145 0 0 chr17 64312211 64312514 -21125966 + AluSx SINE Alu 1 303 -9 984 194 11 0 chr17 64312546 64312726 -21125754 + AluJb SINE Alu 120 301 -11 189 0 0 0 chr17 64312742 64312763 -21125717 + (CA)n Simple_repeat Simple_repeat 2 22 0 1606 245 87 46 chr17 64313068 64313228 -21125252 + L2 LINE L2 2600 2752 -561 1692 155 87 0 chr17 64313228 64313505 -21124975 - AluJb SINE Alu -11 301 1 1606 245 87 46 chr17 64313505 64314039 -21124441 + L2 LINE L2 2752 3307 -6 391 169 36 36 chr17 64314043 64314126 -21124354 - MIR SINE MIR -72 190 108 463 279 74 98 chr17 64314137 64314268 -21124212 + L2 LINE L2 2244 2377 -937 17955 42 1 0 chr17 64314268 64317160 -21121320 - L1PA5 LINE L1 0 6154 3321 463 279 74 98 chr17 64317160 64317486 -21120994 + L2 LINE L2 2377 2690 -624 1641 161 0 45 chr17 64317697 64317989 -21120491 - AluJb SINE Alu -33 279 1 625 200 0 9 chr17 64318140 64318250 -21120230 + 7SLRNA srpRNA srpRNA 1 109 -211 1475 172 39 0 chr17 64318280 64318536 -21119944 + AluJo SINE Alu 22 287 -25 2315 91 3 0 chr17 64318554 64318863 -21119617 + AluSp SINE Alu 1 310 0 544 194 69 49 chr17 64319004 64319148 -21119332 - MER5A DNA MER1_type -5 184 38 357 245 112 14 chr17 64319859 64320002 -21118478 + L1ME4a LINE L1 5964 6120 -1 741 184 7 29 chr17 64320127 64320263 -21118217 + FLAM_A SINE Alu 1 133 0 339 266 77 35 chr17 64322155 64322298 -21116182 + L2 LINE L2 3165 3313 0 1033 278 68 36 chr17 64322358 64322554 -21115926 + L2 LINE L2 2601 2789 -524 1094 185 34 15 chr17 64322554 64322759 -21115721 - MER3 DNA MER1_type 0 209 1 1033 278 68 36 chr17 64322759 64323025 -21115455 + L2 LINE L2 2789 3081 -232 454 127 13 13 chr17 64323025 64323104 -21115376 + L1MB5 LINE L1 6088 6166 -8 2210 117 3 0 chr17 64323106 64323396 -21115084 - AluSx SINE Alu -21 291 1 52 57 0 9 chr17 64323396 64323428 -21115052 + AT_rich Low_complexity Low_complexity 1 32 -72 987 218 12 0 chr17 64323428 64323593 -21114887 + FAM SINE Alu 1 167 -8 52 57 0 9 chr17 64323593 64323665 -21114815 + AT_rich Low_complexity Low_complexity 32 104 0 312 209 21 59 chr17 64323757 64323944 -21114536 + (TA)n Simple_repeat Simple_repeat 1 180 0 2348 103 3 0 chr17 64323957 64324257 -21114223 + AluSp SINE Alu 1 301 -12 964 112 0 0 chr17 64324279 64324404 -21114076 + AluJb SINE Alu 1 125 -187 842 195 0 0 chr17 64324512 64324640 -21113840 + AluJb SINE Alu 2 129 -183 453 324 83 45 chr17 64324967 64325279 -21113201 + L1MEd LINE L1 436 759 -5360 243 217 0 33 chr17 64325379 64325439 -21113041 + L1MEd LINE L1 1180 1237 -4882 2097 139 7 3 chr17 64325526 64325835 -21112645 + AluSx SINE Alu 1 310 -2 810 102 0 0 chr17 64325842 64325960 -21112520 + (GGAA)n Simple_repeat Simple_repeat 4 121 0 276 281 140 12 chr17 64325961 64326132 -21112348 + HAL1 LINE L1 1450 1642 -865 2275 82 48 0 chr17 64326133 64326425 -21112055 + AluSx SINE Alu 1 306 -6 1842 147 18 3 chr17 64326503 64326788 -21111692 - AluJb SINE Alu -12 300 12 380 321 129 42 chr17 64326814 64327200 -21111280 + L1MC/D LINE L1 4747 5166 -980 723 223 199 17 chr17 64327226 64327599 -21110881 + L1MC/D LINE L1 5235 5681 -791 367 277 120 107 chr17 64328366 64328623 -21109857 + L2 LINE L2 2173 2425 -889 261 0 0 0 chr17 64328623 64328652 -21109828 + (TG)n Simple_repeat Simple_repeat 2 30 0 450 113 0 0 chr17 64328662 64328724 -21109756 - L1PA16 LINE L1 -11 6155 6094 367 277 120 107 chr17 64328724 64328861 -21109619 + L2 LINE L2 2433 2567 -747 2309 119 0 0 chr17 64328861 64329173 -21109307 + AluSx SINE Alu 1 312 0 367 277 120 107 chr17 64329173 64329326 -21109154 + L2 LINE L2 2567 2739 -575 321 299 66 70 chr17 64329507 64329778 -21108702 + L2 LINE L2 2838 3107 -165 2264 97 0 7 chr17 64330540 64330838 -21107642 - AluSc SINE Alu -13 296 1 2095 118 0 53 chr17 64331195 64331516 -21106964 + AluSx SINE Alu 1 304 -8 347 99 19 17 chr17 64331536 64331607 -21106873 + Charlie4 DNA MER1_type 1725 1800 -161 366 131 0 0 chr17 64331617 64331678 -21106802 - L1MB4 LINE L1 0 6180 6120 1845 180 0 0 chr17 64331696 64331721 -21106759 - AluJo SINE Alu -1 311 287 264 30 0 0 chr17 64331721 64331754 -21106726 + (TG)n Simple_repeat Simple_repeat 2 34 0 1845 180 0 0 chr17 64331754 64332039 -21106441 - AluJo SINE Alu -24 288 1 226 128 26 0 chr17 64332159 64332198 -21106282 + MER117 DNA MER1_type 4 43 -154 1949 140 0 3 chr17 64332429 64332714 -21105766 - AluSx SINE Alu -28 284 1 408 267 9 17 chr17 64333191 64333307 -21105173 - L2 LINE L2 0 3313 3199 491 260 81 47 chr17 64333320 64333433 -21105047 + L1ME1 LINE L1 5609 5717 -449 2351 105 0 0 chr17 64333433 64333738 -21104742 - AluSg SINE Alu -5 305 1 491 260 81 47 chr17 64333738 64334030 -21104450 + L1ME1 LINE L1 5717 6138 -28 1098 114 0 0 chr17 64334037 64334209 -21104271 - AluSc SINE Alu 0 303 132 2193 93 7 7 chr17 64334209 64334538 -21103942 - AluSp SINE Alu 0 313 2 2155 87 21 0 chr17 64334562 64334848 -21103632 - AluSq SINE Alu -19 294 3 1305 134 0 0 chr17 64335437 64335623 -21102857 - AluJb SINE Alu -7 305 120 359 160 27 53 chr17 64335653 64335728 -21102752 - AluJb SINE Alu -152 150 78 237 65 0 0 chr17 64335786 64335817 -21102663 + (TG)n Simple_repeat Simple_repeat 2 32 0 2104 125 0 26 chr17 64335820 64336125 -21102355 - AluSx SINE Alu -15 297 1 433 176 147 0 chr17 64336129 64336231 -21102249 - L1MC2 LINE L1 -22 6322 6206 667 146 190 0 chr17 64336263 64336421 -21102059 - L1MC2 LINE L1 -22 6322 6135 1997 127 27 3 chr17 64336447 64336746 -21101734 - AluSq SINE Alu -7 306 1 573 317 40 4 chr17 64336746 64336995 -21101485 - L1MEd LINE L1 -4916 1203 946 2372 98 3 0 chr17 64337153 64337458 -21101022 - AluSx SINE Alu -6 306 1 679 188 45 45 chr17 64337518 64337651 -21100829 - FLAM_A SINE Alu 0 133 1 2018 112 17 10 chr17 64338206 64338500 -21099980 - AluSc SINE Alu -13 296 1 2347 82 0 10 chr17 64339074 64339377 -21099103 - AluSx SINE Alu -12 300 1 2307 153 22 62 chr17 64339377 64339434 -21099046 - L1MB3 LINE L1 -123 6060 6002 1957 155 3 7 chr17 64339434 64339743 -21098737 + AluSg SINE Alu 1 308 -2 2307 153 22 62 chr17 64339743 64340149 -21098331 - L1MB3 LINE L1 -181 6002 5616 1604 93 0 5 chr17 64340383 64340587 -21097893 - AluSg/x SINE Alu -19 291 89 2158 128 3 0 chr17 64340705 64341001 -21097479 - AluSx SINE Alu -15 297 1 1209 157 136 75 chr17 64341042 64341322 -21097158 - AluSq SINE Alu -6 297 1 2058 144 0 3 chr17 64341502 64341800 -21096680 + AluSx SINE Alu 1 297 -15 505 161 0 0 chr17 64341836 64341917 -21096563 + AluSp/q SINE Alu 216 296 -17 974 193 0 0 chr17 64342027 64342198 -21096282 - AluSg/x SINE Alu -6 306 136 189 0 0 0 chr17 64342272 64342293 -21096187 + (TA)n Simple_repeat Simple_repeat 1 21 0 1905 125 3 28 chr17 64342295 64342584 -21095896 - AluSx SINE Alu -30 282 1 1179 258 75 16 chr17 64342742 64343118 -21095362 - L1MC2 LINE L1 -1845 5963 5566 2535 66 0 7 chr17 64343292 64343596 -21094884 + AluY SINE Alu 1 302 -9 1461 170 4 47 chr17 64343623 64343900 -21094580 + AluJb SINE Alu 30 294 -18 230 315 76 22 chr17 64343992 64344084 -21094396 + L3 LINE CR1 1437 1533 -44 2216 103 0 3 chr17 64344323 64344614 -21093866 - AluSq SINE Alu -23 290 1 2161 120 0 3 chr17 64345009 64345309 -21093171 - AluSx SINE Alu -13 299 1 1790 155 0 37 chr17 64345471 64345677 -21092803 - AluJb SINE Alu -2 310 119 2044 131 24 0 chr17 64345677 64345968 -21092512 + AluSx SINE Alu 1 298 -14 1790 155 0 37 chr17 64345968 64346083 -21092397 - AluJb SINE Alu -193 119 1 2317 102 0 3 chr17 64346187 64346492 -21091988 + AluSx SINE Alu 2 305 -7 994 167 17 23 chr17 64346691 64346865 -21091615 - AluJo SINE Alu -19 293 121 3365 227 156 77 chr17 64346927 64347575 -21090905 + L1M4 LINE L1 2301 2896 -3250 2416 84 0 0 chr17 64347575 64347874 -21090606 + AluY SINE Alu 1 299 -12 3365 227 156 77 chr17 64347874 64348070 -21090410 + L1M4 LINE L1 2896 3075 -3071 725 163 81 0 chr17 64348070 64348193 -21090287 + AluJo SINE Alu 2 134 -178 3365 227 156 77 chr17 64348193 64348296 -21090184 + L1M4 LINE L1 3075 3168 -2978 1465 145 4 34 chr17 64348296 64348530 -21089950 + AluJo SINE Alu 1 227 -85 3365 227 156 77 chr17 64348530 64349410 -21089070 + L1M4 LINE L1 3168 4406 -1740 322 229 121 12 chr17 64349537 64349620 -21088860 - L2 LINE L2 -35 3278 3187 2428 79 3 0 chr17 64349671 64349976 -21088504 - AluY SINE Alu -5 306 1 1956 152 0 3 chr17 64350034 64350337 -21088143 - AluSx SINE Alu -10 302 1 2413 66 3 20 chr17 64350347 64350652 -21087828 - AluSp SINE Alu -13 300 1 325 276 43 76 chr17 64350820 64351005 -21087475 - MIR SINE MIR -3 259 81 1590 178 3 17 chr17 64351140 64351433 -21087047 + AluJb SINE Alu 1 289 -23 1479 200 48 0 chr17 64351463 64351758 -21086722 - AluSx SINE Alu -3 309 1 1534 223 3 33 chr17 64351870 64352170 -21086310 - AluJo SINE Alu -10 292 2 225 196 0 0 chr17 64352182 64352228 -21086252 + T-rich Low_complexity Low_complexity 1 46 0 1760 142 0 4 chr17 64352351 64352611 -21085869 - AluJb SINE Alu -53 259 1 1089 126 12 6 chr17 64353743 64353910 -21084570 + AluSp SINE Alu 134 301 -12 662 199 135 0 chr17 64353912 64354053 -21084427 - ERVL LTR ERVL -4021 1743 1584 2251 109 0 3 chr17 64355303 64355605 -21082875 + AluSx SINE Alu 1 301 -11 1820 172 0 0 chr17 64355699 64356007 -21082473 - AluJo SINE Alu 0 308 1 315 158 319 45 chr17 64356246 64356408 -21082072 + MLT1A1 LTR MaLR 1 191 -174 864 168 10 69 chr17 64356460 64356616 -21081864 + MLT1A1 LTR MaLR 172 315 -50 1870 135 25 0 chr17 64356616 64356898 -21081582 + AluJb SINE Alu 2 290 -22 864 168 10 69 chr17 64356898 64356944 -21081536 + MLT1A1 LTR MaLR 315 362 -3 548 272 63 6 chr17 64356944 64357102 -21081378 + MIR SINE MIR 5 171 -91 1554 176 87 31 chr17 64357102 64357459 -21081021 - MLT1B LTR MaLR -13 377 1 195 225 310 0 chr17 64357459 64357530 -21080950 + MIR SINE MIR 170 262 0 4092 206 77 47 chr17 64357587 64357998 -21080482 - L1MD2 LINE L1 -16 6343 5946 1974 155 3 0 chr17 64357998 64358288 -21080192 - AluJo SINE Alu -21 291 1 4092 206 77 47 chr17 64358288 64358832 -21079648 - L1MD2 LINE L1 -413 5946 5420 2221 87 37 7 chr17 64358832 64359131 -21079349 - AluSp SINE Alu -5 308 1 4092 206 77 47 chr17 64359131 64359450 -21079030 - L1MD2 LINE L1 -939 5420 4997 2302 87 0 26 chr17 64359450 64359799 -21078681 - AluSq SINE Alu 0 313 1 4092 206 77 47 chr17 64359799 64359913 -21078567 - L1MD2 LINE L1 -1362 4997 4888 1349 148 40 92 chr17 64359938 64360242 -21078238 - AluJo SINE Alu -11 301 14 249 246 0 0 chr17 64360242 64360299 -21078181 - L1MD2 LINE L1 -1259 4887 4831 2100 109 0 7 chr17 64360299 64360607 -21077873 - AluSg1 SINE Alu 0 306 1 28 0 0 26 chr17 64360755 64360768 -21077712 + AT_rich Low_complexity Low_complexity 1 13 -25 2095 129 3 3 chr17 64360768 64361063 -21077417 - AluSx SINE Alu -17 295 1 28 0 0 26 chr17 64361063 64361088 -21077392 + AT_rich Low_complexity Low_complexity 13 38 0 4281 153 78 55 chr17 64361147 64361196 -21077284 - L1MB3 LINE L1 -2 6181 6135 2327 96 0 0 chr17 64361196 64361498 -21076982 - AluSq SINE Alu -11 302 1 4281 153 78 55 chr17 64361498 64362547 -21075933 - L1MB3 LINE L1 -48 6135 5056 2347 84 14 0 chr17 64362547 64362844 -21075636 - AluSx SINE Alu -11 301 1 4281 153 78 55 chr17 64362844 64362886 -21075594 - L1MB3 LINE L1 -1127 5056 5016 1217 139 43 149 chr17 64363425 64363538 -21074942 - L1MB3 LINE L1 -1117 5029 4906 1982 117 11 4 chr17 64363538 64363819 -21074661 - AluSx SINE Alu -24 288 6 1217 139 43 149 chr17 64363819 64364001 -21074479 - L1MB3 LINE L1 -1240 4906 4706 2226 45 48 0 chr17 64364001 64364300 -21074180 - AluYa5 SINE Alu 0 312 1 1217 139 43 149 chr17 64364300 64364329 -21074151 - L1MB3 LINE L1 -1440 4706 4752 1997 146 0 0 chr17 64364329 64364616 -21073864 - AluSx SINE Alu -24 288 2 1217 139 43 149 chr17 64364616 64364697 -21073783 - L1MB3 LINE L1 -1393 4753 4665 874 102 86 0 chr17 64364700 64364828 -21073652 - MER85 DNA T2_type 0 139 1 402 268 87 56 chr17 64364914 64365041 -21073439 + L1M4 LINE L1 4129 4268 -1878 2091 139 0 7 chr17 64365041 64365350 -21073130 + AluSx SINE Alu 1 307 -5 402 268 87 56 chr17 64365350 64365453 -21073027 + L1M4 LINE L1 4268 4366 -1780 1857 130 3 30 chr17 64365505 64365804 -21072676 - AluJb SINE Alu -21 291 1 1327 199 137 3 chr17 64365806 64366142 -21072338 - L1M4 LINE L1 -1151 5806 5426 852 74 0 0 chr17 64366151 64366259 -21072221 + AluSq/x SINE Alu 1 108 -205 28 29 0 0 chr17 64366259 64366294 -21072186 + AT_rich Low_complexity Low_complexity 1 35 0 495 222 82 7 chr17 64366294 64366429 -21072051 - L1M4 LINE L1 -1737 5220 5076 1527 310 60 11 chr17 64366433 64366998 -21071482 - L1M4 LINE L1 -5932 927 335 2310 104 0 0 chr17 64367018 64367316 -21071164 + AluSq SINE Alu 5 302 -11 24 32 0 0 chr17 64367354 64367385 -21071095 + AT_rich Low_complexity Low_complexity 1 31 0 1547 166 47 4 chr17 64367510 64367788 -21070692 + AluJo SINE Alu 1 290 -22 1491 152 85 32 chr17 64368020 64368303 -21070177 - AluJo SINE Alu -13 299 2 1894 134 22 4 chr17 64369916 64370219 -21068261 + AluJb SINE Alu 1 308 0 21 0 0 0 chr17 64371267 64371288 -21067192 + AT_rich Low_complexity Low_complexity 1 21 0 1091 203 9 27 chr17 64371430 64371652 -21066828 + MER20 DNA MER1_type 2 219 0 1728 188 7 3 chr17 64372071 64372369 -21066111 - AluJb SINE Alu -13 299 1 957 240 110 33 chr17 64372793 64373130 -21065350 + L2 LINE L2 1133 1495 -1819 1145 264 206 35 chr17 64373182 64373923 -21064557 + L2 LINE L2 2279 3151 -162 1025 214 119 36 chr17 64373948 64374285 -21064195 - L1ME3A LINE L1 -2 6168 5804 204 232 0 136 chr17 64374300 64374367 -21064113 + L2 LINE L2 3140 3184 -129 2425 65 0 7 chr17 64374367 64374660 -21063820 - AluSc SINE Alu -18 291 1 204 232 0 136 chr17 64374660 64374717 -21063763 + L2 LINE L2 3184 3247 -66 244 253 209 22 chr17 64374748 64374839 -21063641 + L2 LINE L2 3182 3289 -24 2169 108 0 0 chr17 64375009 64375335 -21063145 - AluSx SINE Alu 0 327 2 383 213 53 0 chr17 64375371 64375446 -21063034 + MER58C DNA MER1_type 121 199 -16 298 245 68 41 chr17 64375677 64375824 -21062656 - L1MEc LINE L1 -3529 2600 2450 1806 143 19 19 chr17 64375846 64376153 -21062327 - AluSx SINE Alu -5 307 1 237 270 61 51 chr17 64376322 64376518 -21061962 - L1MEc LINE L1 -4128 2182 1985 1597 153 19 59 chr17 64376533 64376659 -21061821 + AluJb SINE Alu 2 132 -180 1730 103 9 4 chr17 64376659 64376926 -21061554 + AluSg SINE Alu 48 315 0 1597 153 19 59 chr17 64376926 64377118 -21061362 + AluJb SINE Alu 132 309 -3 954 288 82 24 chr17 64377285 64377984 -21060496 - L1MEc LINE L1 -4576 1734 996 261 321 52 39 chr17 64378055 64378363 -21060117 - L1MEc LINE L1 -5264 855 544 331 320 87 70 chr17 64378467 64378794 -21059686 - L1MEc LINE L1 -5694 425 90 207 0 0 0 chr17 64378794 64378817 -21059663 + (TTG)n Simple_repeat Simple_repeat 2 24 0 331 320 87 70 chr17 64378817 64378833 -21059647 - L1MEc LINE L1 -6029 90 76 341 236 212 46 chr17 64379341 64379762 -21058718 - L1ME3A LINE L1 -322 5799 5287 41 48 0 0 chr17 64379771 64379833 -21058647 + AT_rich Low_complexity Low_complexity 1 62 0 327 25 0 0 chr17 64379987 64380027 -21058453 + (TG)n Simple_repeat Simple_repeat 2 41 0 272 75 0 0 chr17 64380029 64380069 -21058411 - Alu SINE Alu -6 296 257 219 36 0 0 chr17 64380069 64380097 -21058383 + (TG)n Simple_repeat Simple_repeat 2 29 0 2175 125 0 0 chr17 64380099 64380396 -21058084 - AluSx SINE Alu -15 297 1 509 280 96 87 chr17 64380484 64381501 -21056979 - L1ME3A LINE L1 -1162 4984 3952 2208 111 10 3 chr17 64381501 64381807 -21056673 - AluSq SINE Alu -5 308 1 509 280 96 87 chr17 64381807 64382041 -21056439 - L1ME3A LINE L1 -2194 3952 3722 2411 72 3 25 chr17 64382104 64382424 -21056056 + AluSq SINE Alu 1 313 0 2334 177 51 2 chr17 64383962 64384401 -21054079 + MER6A DNA MER2_type -19 443 -162 2572 59 0 0 chr17 64384649 64384954 -21053526 - AluY SINE Alu -6 305 1 185 346 0 0 chr17 64385079 64385131 -21053349 - L2 LINE L2 -1 3312 3261 445 272 163 6 chr17 64385499 64385867 -21052613 + L1MC4a LINE L1 5285 5738 -383 1486 251 88 109 chr17 64385905 64386093 -21052387 + L2 LINE L2 1935 2126 -1187 1887 116 6 85 chr17 64386093 64386422 -21052058 - AluSx SINE Alu -9 303 1 1486 251 88 109 chr17 64386422 64386722 -21051758 + L2 LINE L2 2126 2431 -882 778 201 0 15 chr17 64386722 64386856 -21051624 - FLAM_C SINE Alu 0 133 2 1486 251 88 109 chr17 64386856 64387020 -21051460 + L2 LINE L2 2431 2597 -716 2268 101 27 3 chr17 64387020 64387318 -21051162 - AluSx SINE Alu -7 305 1 1486 251 88 109 chr17 64387318 64388005 -21050475 + L2 LINE L2 2597 3309 -4 372 293 43 7 chr17 64388022 64388162 -21050318 + L1MC4a LINE L1 5753 5897 -1911 838 152 24 55 chr17 64388232 64388396 -21050084 - FAM SINE Alu -16 169 11 503 106 0 0 chr17 64388410 64388476 -21050004 + Alu SINE Alu 230 295 -15 605 187 114 16 chr17 64388902 64389025 -21049455 - AluJo SINE Alu -176 136 2 268 200 57 67 chr17 64389600 64389705 -21048775 - L1MC5 LINE L1 -838 7123 7020 4660 184 38 5 chr17 64389858 64390809 -21047671 - L1M4 LINE L1 -407 5771 4759 2076 163 129 3 chr17 64390809 64391189 -21047291 - MSTA LTR MaLR 0 428 1 4660 184 38 5 chr17 64391189 64391661 -21046819 - L1M4 LINE L1 -1419 4759 4304 1880 107 8 8 chr17 64391666 64391918 -21046562 - AluSg SINE Alu -32 278 27 836 39 0 0 chr17 64391918 64392021 -21046459 + Harlequin LTR ERV1 2172 2274 -4622 1155 151 0 0 chr17 64392086 64392252 -21046228 + AluSg/x SINE Alu 131 296 -14 207 0 0 0 chr17 64392312 64392335 -21046145 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1604 137 3 63 chr17 64392338 64392493 -21045987 - AluJo SINE Alu -31 281 118 234 0 0 0 chr17 64392493 64392519 -21045961 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1858 151 0 4 chr17 64392525 64392796 -21045684 - AluSx SINE Alu -37 275 6 1604 137 3 63 chr17 64392796 64392932 -21045548 - AluJo SINE Alu -199 113 1 436 307 53 53 chr17 64393003 64393163 -21045317 - L1MEd LINE L1 -4918 1201 1039 2385 101 0 13 chr17 64393163 64393479 -21045001 - AluSx SINE Alu 0 312 1 436 307 53 53 chr17 64393479 64393601 -21044879 - L1MEd LINE L1 -5079 1040 919 315 0 0 0 chr17 64394860 64394895 -21043585 + (TG)n Simple_repeat Simple_repeat 2 36 0 2310 109 0 3 chr17 64394896 64395200 -21043280 - AluSg SINE Alu -7 303 1 2212 113 0 13 chr17 64395349 64395658 -21042822 - AluSg SINE Alu -5 305 1 2449 73 0 19 chr17 64395731 64396048 -21042432 + AluY SINE Alu 1 311 0 1930 113 0 70 chr17 64396287 64396589 -21041891 - AluSx SINE Alu -31 281 1 2300 104 0 3 chr17 64396602 64396900 -21041580 - AluSx SINE Alu -15 297 1 414 242 16 62 chr17 64397072 64397200 -21041280 + L2 LINE L2 3151 3272 0 225 316 0 0 chr17 64397200 64397276 -21041204 + MIR SINE MIR 136 211 -51 301 287 9 52 chr17 64397343 64397458 -21041022 + MIR SINE MIR 60 169 -93 1966 124 11 0 chr17 64397458 64397725 -21040755 - AluSx SINE Alu -32 280 11 2476 83 0 0 chr17 64398043 64398343 -21040137 + AluY SINE Alu 1 300 -11 2000 134 3 26 chr17 64400912 64401225 -21037255 + AluSx SINE Alu 1 306 -6 1470 189 46 3 chr17 64401226 64401511 -21036969 + AluJo SINE Alu 1 297 -15 207 305 0 0 chr17 64401621 64401680 -21036800 + (TA)n Simple_repeat Simple_repeat 2 60 0 26 0 0 27 chr17 64402088 64402104 -21036376 + AT_rich Low_complexity Low_complexity 1 16 -20 2455 65 14 0 chr17 64402104 64402397 -21036083 - AluSg SINE Alu -13 297 1 26 0 0 27 chr17 64402397 64402417 -21036063 + AT_rich Low_complexity Low_complexity 16 36 0 708 200 71 47 chr17 64402417 64402587 -21035893 - AluYa5 SINE Alu -22 289 116 1460 143 0 0 chr17 64402625 64402835 -21035645 - AluSx SINE Alu -102 210 1 1874 161 10 0 chr17 64403554 64403845 -21034635 - AluJo SINE Alu -18 294 1 200 119 0 24 chr17 64404064 64404106 -21034374 + (TTTTTA)n Simple_repeat Simple_repeat 4 44 0 1708 134 27 44 chr17 64404774 64405072 -21033408 - AluJb SINE Alu -8 304 12 21 0 0 0 chr17 64405147 64405168 -21033312 + AT_rich Low_complexity Low_complexity 1 21 0 2038 148 3 0 chr17 64405988 64406298 -21032182 - AluSx SINE Alu -1 311 1 1865 125 75 0 chr17 64407283 64407450 -21031030 - AluSx SINE Alu -12 300 102 4810 40 3 2 chr17 64407450 64408022 -21030458 - L1PA4 LINE L1 0 6155 5583 1865 125 75 0 chr17 64408022 64408133 -21030347 - AluSx SINE Alu -210 102 1 2090 130 7 3 chr17 64408699 64408991 -21029489 + AluSx SINE Alu 1 293 -19 1948 236 28 37 chr17 64409061 64409459 -21029021 + L1ME2 LINE L1 5274 5667 -497 783 178 0 30 chr17 64409459 64409594 -21028886 + FLAM_C SINE Alu 1 131 -2 1948 236 28 37 chr17 64409594 64409793 -21028687 + L1ME2 LINE L1 5667 5866 -298 183 250 0 23 chr17 64409795 64409839 -21028641 - L2 LINE L2 -86 3186 3144 941 94 71 0 chr17 64410430 64410557 -21027923 + AluJb SINE Alu 1 136 -176 2252 114 0 3 chr17 64410557 64410856 -21027624 + AluSp SINE Alu 6 303 -10 425 159 261 0 chr17 64410858 64410946 -21027534 - AluJo/FLAM SINE Alu -200 112 2 2034 118 14 3 chr17 64411168 64411457 -21027023 - AluSq SINE Alu -21 292 1 1072 153 6 22 chr17 64411569 64411752 -21026728 + FRAM SINE Alu 1 175 -1 2231 93 0 45 chr17 64411886 64412199 -21026281 - AluSc SINE Alu -10 299 1 2349 92 7 0 chr17 64412266 64412570 -21025910 - AluSq SINE Alu -6 307 2 593 159 71 24 chr17 64413074 64413200 -21025280 - FLAM_A SINE Alu 0 133 2 2295 98 3 3 chr17 64414558 64414863 -21023617 - AluSq SINE Alu -8 305 1 22 0 0 0 chr17 64414863 64414885 -21023595 + AT_rich Low_complexity Low_complexity 1 22 0 2370 88 0 7 chr17 64415387 64415682 -21022798 + AluSx SINE Alu 1 293 -19 878 164 62 0 chr17 64415692 64415838 -21022642 + AluSp SINE Alu 138 292 -21 381 291 39 29 chr17 64415945 64416151 -21022329 - L1M4 LINE L1 -765 5381 5174 2334 82 20 0 chr17 64416190 64416483 -21021997 - AluSp SINE Alu -14 299 1 2585 64 6 3 chr17 64416695 64417025 -21021455 - L1PA7 LINE L1 0 6154 5824 2107 129 0 13 chr17 64417420 64417730 -21020750 + AluSx SINE Alu 1 306 -6 1999 98 0 8 chr17 64418152 64418418 -21020062 + AluSq SINE Alu 45 308 -5 508 179 74 0 chr17 64418436 64418531 -21019949 - FLAM_A SINE Alu -40 102 1 21 0 0 0 chr17 64418534 64418555 -21019925 + AT_rich Low_complexity Low_complexity 1 21 0 1729 139 27 44 chr17 64418614 64418909 -21019571 - AluJo SINE Alu -22 290 1 2205 109 0 10 chr17 64419429 64419723 -21018757 + AluSx SINE Alu 9 299 -13 2221 84 0 45 chr17 64419946 64420256 -21018224 + AluSx SINE Alu 1 296 -16 1993 145 3 0 chr17 64420256 64420562 -21017918 + AluSg SINE Alu 1 307 0 2018 147 0 3 chr17 64420894 64421186 -21017294 + AluJb SINE Alu 1 291 -21 496 196 18 36 chr17 64421498 64421610 -21016870 - FLAM_A SINE Alu -5 137 28 487 89 0 122 chr17 64421629 64421679 -21016801 - MADE1 DNA Mariner -1 79 43 2386 93 3 0 chr17 64421679 64421980 -21016500 + AluSp SINE Alu 5 306 -7 487 89 0 122 chr17 64421980 64422019 -21016461 - MADE1 DNA Mariner -37 43 1 2508 63 0 0 chr17 64422275 64422578 -21015902 + AluY SINE Alu 8 310 -1 1694 157 42 7 chr17 64422597 64422729 -21015751 + AluJo SINE Alu 2 128 -184 2334 77 27 7 chr17 64422729 64423027 -21015453 + AluSx SINE Alu 2 305 -7 1694 157 42 7 chr17 64423027 64423180 -21015300 + AluJo SINE Alu 128 297 -15 2008 91 70 24 chr17 64423406 64423568 -21014912 - AluSx SINE Alu -12 300 118 2415 110 0 0 chr17 64423568 64423876 -21014604 - AluSq SINE Alu -5 308 1 2008 91 70 24 chr17 64423876 64424000 -21014480 - AluSx SINE Alu -194 118 1 2240 109 0 0 chr17 64424016 64424309 -21014171 - AluSg SINE Alu -17 293 1 721 144 9 0 chr17 64424756 64424867 -21013613 + FRAM SINE Alu 56 167 -9 2723 105 21 108 chr17 64424867 64424928 -21013552 + Tigger1 DNA MER2_type 1739 1804 -614 198 0 0 0 chr17 64424928 64424950 -21013530 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2723 105 21 108 chr17 64424950 64425423 -21013057 + Tigger1 DNA MER2_type 1804 2226 -192 1942 153 6 19 chr17 64425423 64425737 -21012743 - AluSx SINE Alu -2 310 1 2041 98 17 44 chr17 64425746 64426042 -21012438 - AluSg SINE Alu -17 293 6 273 61 0 0 chr17 64426118 64426151 -21012329 + AluJb SINE Alu 78 110 -192 * 2046 199 80 2 chr17 64426142 64426568 -21011912 - Tigger1 DNA MER2_type -1956 462 4 310 320 52 0 chr17 64427206 64427303 -21011177 - L2 LINE L2 -2 3270 3169 601 213 264 0 chr17 64427717 64427872 -21010608 - MER3 DNA MER1_type -13 196 1 1710 126 0 0 chr17 64427990 64428220 -21010260 - AluSx SINE Alu -81 231 2 2091 146 0 9 chr17 64428228 64428543 -21009937 - AluSx SINE Alu 0 312 1 2169 131 3 0 chr17 64428552 64428849 -21009631 - AluSq SINE Alu -15 298 1 533 145 137 43 chr17 64428901 64429018 -21009462 + MER2 DNA MER2_type 68 195 -150 1502 144 96 37 chr17 64429048 64429186 -21009294 - AluJb SINE Alu -25 287 159 2391 74 0 10 chr17 64429186 64429482 -21008998 - AluY SINE Alu -17 294 2 1502 144 96 37 chr17 64429482 64429614 -21008866 - AluJb SINE Alu -153 159 1 280 279 0 0 chr17 64429623 64429684 -21008796 + MER2 DNA MER2_type 282 342 -3 914 170 30 70 chr17 64429819 64429982 -21008498 + L1MB7 LINE L1 5964 6117 -67 2264 114 0 0 chr17 64429982 64430288 -21008192 + AluSg SINE Alu 1 306 -4 914 170 30 70 chr17 64430288 64430354 -21008126 + L1MB7 LINE L1 6117 6184 0 1365 135 24 5 chr17 64430435 64430642 -21007838 + AluJb SINE Alu 88 298 -14 2088 93 7 50 chr17 64430700 64430836 -21007644 + AluSx SINE Alu 1 141 -171 2319 82 4 0 chr17 64430836 64431116 -21007364 + AluSp SINE Alu 1 281 -32 240 35 0 0 chr17 64431116 64431145 -21007335 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2088 93 7 50 chr17 64431145 64431308 -21007172 + AluSx SINE Alu 139 288 -24 2346 98 0 0 chr17 64432030 64432325 -21006155 + AluSx SINE Alu 1 295 -17 284 247 0 49 chr17 64432327 64432408 -21006072 + MER21B LTR ERV1 4 80 -783 2095 131 0 0 chr17 64432410 64432692 -21005788 + AluSx SINE Alu 1 282 -30 1917 164 0 7 chr17 64432915 64433213 -21005267 + AluJo SINE Alu 1 296 -16 1590 204 124 13 chr17 64433222 64433662 -21004818 + MER21B LTR ERV1 415 810 -53 577 165 29 0 chr17 64434008 64434111 -21004369 - FLAM_C SINE Alu -36 107 2 332 175 245 49 chr17 64434627 64434770 -21003710 - MIR SINE MIR -9 253 83 199 293 120 48 chr17 64435814 64435981 -21002499 - L3 LINE CR1 0 1577 1399 2523 57 0 3 chr17 64435985 64436282 -21002198 - AluY SINE Alu -15 296 1 1803 93 4 8 chr17 64436316 64436562 -21001918 + AluSc SINE Alu 1 245 -64 1472 81 10 5 chr17 64436662 64436859 -21001621 + AluSc SINE Alu 98 295 -14 367 331 14 14 chr17 64437081 64437229 -21001251 + MIR3 SINE MIR 51 198 -10 2147 135 0 0 chr17 64439356 64439652 -20998828 - AluSx SINE Alu -16 296 1 2481 73 0 6 chr17 64440176 64440489 -20997991 - AluY SINE Alu 0 311 1 2132 104 27 0 chr17 64440786 64441085 -20997395 - AluSx SINE Alu -5 307 1 1715 194 0 3 chr17 64441085 64441389 -20997091 - AluJb SINE Alu -9 303 1 2047 92 3 44 chr17 64441613 64441748 -20996732 + AluSg SINE Alu 1 140 -164 2164 92 4 7 chr17 64441748 64442029 -20996451 + AluSc SINE Alu 1 280 -29 256 24 49 0 chr17 64442035 64442076 -20996404 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2047 92 3 44 chr17 64442076 64442249 -20996231 + AluSg SINE Alu 145 304 0 466 260 81 47 chr17 64442256 64442548 -20995932 - L1ME1 LINE L1 -28 6138 5717 2366 105 0 0 chr17 64442548 64442853 -20995627 + AluSg SINE Alu 1 305 -5 466 260 81 47 chr17 64442853 64442966 -20995514 - L1ME1 LINE L1 -449 5717 5609 374 267 9 17 chr17 64442979 64443095 -20995385 + L2 LINE L2 3199 3313 0 1972 140 0 3 chr17 64443572 64443857 -20994623 + AluSx SINE Alu 1 284 -28 225 128 26 0 chr17 64444088 64444127 -20994353 - MER117 DNA MER1_type -154 43 4 1858 180 0 0 chr17 64444247 64444532 -20993948 + AluJo SINE Alu 1 288 -24 264 30 0 0 chr17 64444532 64444565 -20993915 + (CA)n Simple_repeat Simple_repeat 2 34 0 1858 180 0 0 chr17 64444565 64444590 -20993890 + AluJo SINE Alu 287 311 -1 358 131 0 0 chr17 64444608 64444669 -20993811 + L1MB4 LINE L1 6120 6180 0 342 99 19 17 chr17 64444679 64444750 -20993730 - Charlie4 DNA MER1_type -161 1800 1725 2117 118 0 53 chr17 64444770 64445091 -20993389 - AluSx SINE Alu -8 304 1 2278 97 0 7 chr17 64445448 64445746 -20992734 + AluSc SINE Alu 1 296 -13 321 299 66 70 chr17 64446508 64446779 -20991701 - L2 LINE L2 -165 3107 2838 367 277 120 107 chr17 64446960 64447113 -20991367 - L2 LINE L2 -575 2739 2589 2309 119 0 0 chr17 64447113 64447425 -20991055 - AluSx SINE Alu 0 312 1 367 277 120 107 chr17 64447425 64447562 -20990918 - L2 LINE L2 -725 2589 2455 450 113 0 0 chr17 64447562 64447624 -20990856 + L1PA16 LINE L1 6094 6155 -11 261 0 0 0 chr17 64447634 64447663 -20990817 + (CA)n Simple_repeat Simple_repeat 2 30 0 367 277 120 107 chr17 64447663 64447920 -20990560 - L2 LINE L2 -867 2447 2173 723 237 208 23 chr17 64448687 64449033 -20989447 - L1MC/D LINE L1 -2127 5681 5272 380 321 129 42 chr17 64449086 64449472 -20989008 - L1MC/D LINE L1 -980 5166 4747 1463 139 23 0 chr17 64449498 64449714 -20988766 + AluJb SINE Alu 12 232 -80 296 273 128 76 chr17 64500447 64500619 -20937861 + MIR SINE MIR 68 248 -14 2278 86 0 3 chr17 64500660 64500963 -20937517 + AluY SINE Alu 5 306 -5 1554 151 102 7 chr17 64501020 64501304 -20937176 + AluJb SINE Alu 2 312 0 3673 159 23 31 chr17 64501320 64501731 -20936749 - MER41B LTR ERV1 0 635 229 2137 123 0 0 chr17 64501731 64502023 -20936457 - AluSg SINE Alu -18 292 1 3673 159 23 31 chr17 64502023 64502251 -20936229 - MER41B LTR ERV1 -406 229 1 2178 120 0 0 chr17 64502255 64502555 -20935925 - AluSx SINE Alu -12 300 1 210 71 0 0 chr17 64502608 64502636 -20935844 + (T)n Simple_repeat Simple_repeat 1 28 0 1635 166 10 26 chr17 64503090 64503212 -20935268 + AluJo SINE Alu 1 123 -189 2462 54 0 0 chr17 64503212 64503510 -20934970 - AluY SINE Alu -13 298 1 1635 166 10 26 chr17 64503510 64503694 -20934786 + AluJo SINE Alu 123 302 -10 2374 62 3 13 chr17 64503884 64504192 -20934288 - AluY SINE Alu -6 305 1 807 178 0 8 chr17 64504197 64504326 -20934154 - FLAM_C SINE Alu -3 130 3 954 77 31 8 chr17 64504503 64504633 -20933847 + AluSq/x SINE Alu 2 134 -179 250 75 0 0 chr17 64504634 64504674 -20933806 + AluSg/x SINE Alu 93 132 -168 2156 131 0 0 chr17 64504675 64504987 -20933493 + AluSx SINE Alu 1 312 0 1470 139 57 18 chr17 64505293 64505574 -20932906 - AluJo SINE Alu -9 303 12 2208 123 0 0 chr17 64505880 64506190 -20932290 + AluSg SINE Alu 1 310 0 1032 114 34 40 chr17 64506190 64506365 -20932115 + AluSg/x SINE Alu 134 307 -5 2110 100 0 29 chr17 64506474 64506784 -20931696 + AluSx SINE Alu 1 301 -11 430 315 103 47 chr17 64506818 64507050 -20931430 + L1ME3A LINE L1 5448 5692 -429 923 151 0 0 chr17 64507053 64507199 -20931281 - FRAM SINE Alu -23 153 8 2076 82 0 63 chr17 64507276 64507591 -20930889 - AluSp SINE Alu -18 295 1 269 406 0 0 chr17 64507763 64507859 -20930621 - L2 LINE L2 -20 3252 3157 1333 171 43 43 chr17 64507939 64508106 -20930374 - AluJo SINE Alu 0 301 132 2286 47 0 75 chr17 64508106 64508428 -20930052 - AluY SINE Alu -13 298 1 1333 171 43 43 chr17 64508428 64508561 -20929919 - AluJo SINE Alu -168 133 1 883 180 64 0 chr17 64508591 64508763 -20929717 + AluSg/x SINE Alu 129 311 -1 309 289 101 18 chr17 64509012 64509240 -20929240 + L1ME3A LINE L1 5706 5952 -218 * 1966 253 104 5 chr17 64509208 64509316 -20929164 - L1MC4 LINE L1 -17 8025 7929 252 0 0 0 chr17 64509316 64509344 -20929136 + (TG)n Simple_repeat Simple_repeat 1 28 0 1966 253 104 5 chr17 64509344 64509877 -20928603 - L1MC4 LINE L1 -113 7929 7313 1908 153 7 0 chr17 64509877 64510171 -20928309 - AluSx SINE Alu -16 296 1 1966 253 104 5 chr17 64510171 64510193 -20928287 - L1MC4 LINE L1 -729 7313 7295 841 205 78 132 chr17 64510187 64510470 -20928010 + L1ME3A LINE L1 5639 5912 -252 * 2245 108 0 3 chr17 64510470 64510784 -20927696 + AluSq SINE Alu 1 313 0 841 205 78 132 chr17 64510784 64510867 -20927613 + L1ME3A LINE L1 5912 5998 -166 232 250 53 0 chr17 64511032 64511108 -20927372 + L1ME4a LINE L1 5325 5404 -762 271 263 96 19 chr17 64511141 64511350 -20927130 + L1ME4a LINE L1 5677 5901 -220 199 158 18 35 chr17 64511360 64511417 -20927063 + (TATATG)n Simple_repeat Simple_repeat 4 59 0 1983 145 3 0 chr17 64511562 64511858 -20926622 + AluSq SINE Alu 1 297 -16 604 154 205 0 chr17 64511869 64511986 -20926494 + FLAM_C SINE Alu 2 142 -1 202 241 138 0 chr17 64512703 64512761 -20925719 - MIR SINE MIR -58 150 85 263 200 33 11 chr17 64512835 64512925 -20925555 + (TA)n Simple_repeat Simple_repeat 2 93 0 256 259 178 24 chr17 64512925 64512951 -20925529 - L1ME4a LINE L1 -161 5960 5939 1875 156 0 19 chr17 64512951 64513259 -20925221 - AluJo SINE Alu -10 302 1 256 259 178 24 chr17 64513259 64513429 -20925051 - L1ME4a LINE L1 -182 5939 5731 2521 59 0 0 chr17 64513436 64513743 -20924737 - AluY SINE Alu -4 307 1 801 153 15 8 chr17 64513746 64513877 -20924603 - AluJo/FLAM SINE Alu -169 133 2 275 256 23 0 chr17 64514266 64514352 -20924128 - L1ME4a LINE L1 -50 6071 5984 352 319 66 24 chr17 64514353 64514519 -20923961 - MER5A DNA MER1_type 0 189 6 644 302 89 27 chr17 64514564 64514593 -20923887 - L1ME4a LINE L1 -194 5927 5901 2268 103 0 3 chr17 64514593 64514905 -20923575 - AluSx SINE Alu -1 311 1 644 302 89 27 chr17 64514905 64515246 -20923234 - L1ME4a LINE L1 -220 5901 5534 212 346 48 10 chr17 64515397 64515501 -20922979 - MIR SINE MIR -62 146 39 1734 84 4 0 chr17 64515542 64515769 -20922711 + AluSx SINE Alu 1 228 -84 2019 123 0 0 chr17 64516733 64517018 -20921462 + AluSx SINE Alu 5 289 -23 2045 102 19 22 chr17 64517301 64517615 -20920865 - AluSq SINE Alu 0 313 1 305 194 284 15 chr17 64517741 64517875 -20920605 - Charlie8 DNA MER1_type -2146 271 102 515 259 100 45 chr17 64517947 64518167 -20920313 + MIR SINE MIR 31 262 0 453 240 99 0 chr17 64518188 64518309 -20920171 - MER94 DNA DNA -1 133 1 295 230 100 0 chr17 64518396 64518496 -20919984 + MIR3 SINE MIR 90 199 -9 2356 74 0 0 chr17 64518505 64518802 -20919678 - AluSc SINE Alu -12 297 1 1771 154 13 0 chr17 64518994 64519292 -20919188 - AluSx SINE Alu -10 302 1 195 42 0 0 chr17 64520781 64520805 -20917675 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 281 231 0 0 chr17 64521841 64521893 -20916587 - L2 LINE L2 -6 3307 3256 1708 145 0 72 chr17 64522283 64522424 -20916056 + AluJo SINE Alu 6 156 -156 2163 76 3 3 chr17 64522424 64522714 -20915766 + AluY SINE Alu 1 290 -21 2044 56 0 4 chr17 64522714 64522985 -20915495 + AluY SINE Alu 33 304 0 1708 145 0 72 chr17 64522985 64523172 -20915308 + AluJo SINE Alu 154 312 0 1536 150 0 55 chr17 64523349 64523476 -20915004 - AluJo SINE Alu -52 260 154 2194 97 3 0 chr17 64523476 64523764 -20914716 - AluSg SINE Alu -21 289 1 1536 150 0 55 chr17 64523764 64523910 -20914570 - AluJo SINE Alu -158 154 2 435 281 238 13 chr17 64524289 64524520 -20913960 - MLT1K LTR MaLR -162 426 144 253 310 46 0 chr17 64524677 64524764 -20913716 + L2 LINE L2 3169 3259 -13 219 69 0 0 chr17 64524764 64524793 -20913687 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 200 358 37 28 chr17 64524845 64524954 -20913526 - L2 LINE L2 -1 3271 3162 251 277 34 88 chr17 64525622 64525770 -20912710 + L2 LINE L2 3101 3240 -32 198 230 176 0 chr17 64525798 64525872 -20912608 - MIR3 SINE MIR -14 194 108 230 162 44 88 chr17 64525879 64525947 -20912533 + MIR3 SINE MIR 92 156 -52 1789 190 21 43 chr17 64526353 64526677 -20911803 - MLT1A1 LTR MaLR 0 365 49 2070 102 0 20 chr17 64526677 64526980 -20911500 + AluSx SINE Alu 1 297 -15 1789 190 21 43 chr17 64526980 64527028 -20911452 - MLT1A1 LTR MaLR -316 49 1 183 171 43 86 chr17 64527190 64527260 -20911220 - L2 LINE L2 -568 2746 2680 290 202 83 36 chr17 64527335 64527419 -20911061 - L2 LINE L2 -1 3271 3184 351 366 11 51 chr17 64527439 64527614 -20910866 + L1ME LINE L1 3 170 -5900 488 259 64 86 chr17 64527708 64527928 -20910552 + L1ME LINE L1 316 530 -5540 277 230 20 184 chr17 64528044 64528348 -20910132 + L1ME LINE L1 521 634 -5436 440 290 98 0 chr17 64528487 64528722 -20909758 - L2 LINE L2 -311 2961 2709 243 280 53 8 chr17 64528723 64528855 -20909625 - L1MC/D LINE L1 -2375 5433 5296 618 125 42 14 chr17 64528892 64529036 -20909444 + CT-rich Low_complexity Low_complexity 2 149 0 656 126 78 0 chr17 64529038 64529141 -20909339 - HY1 scRNA scRNA -1 111 1 21 0 0 0 chr17 64529325 64529346 -20909134 + AT_rich Low_complexity Low_complexity 1 21 0 2088 117 0 7 chr17 64529381 64529679 -20908801 + AluSx SINE Alu 1 296 -16 234 331 29 36 chr17 64529730 64529869 -20908611 + MIR3 SINE MIR 5 142 -66 437 208 279 0 chr17 64529881 64530035 -20908445 - MIR SINE MIR -13 249 53 2206 103 10 6 chr17 64530044 64530355 -20908125 + AluSp SINE Alu 2 313 0 427 196 15 23 chr17 64530601 64530734 -20907746 + CT-rich Low_complexity Low_complexity 3 134 0 935 185 46 19 chr17 64530737 64530953 -20907527 - L1MB8 LINE L1 -11 6167 5946 2740 7 0 0 chr17 64531369 64531674 -20906806 - AluYa5 SINE Alu -6 305 1 184 267 12 58 chr17 64531801 64531887 -20906593 + MIR SINE MIR 159 240 -22 2099 108 0 34 chr17 64532533 64532856 -20905624 + AluSx SINE Alu 1 312 0 422 304 19 87 chr17 64535185 64535451 -20903029 - L2 LINE L2 -101 3171 2924 1789 143 25 35 chr17 64535489 64535831 -20902649 + AluJo SINE Alu 1 312 0 446 243 191 0 chr17 64535885 64536037 -20902443 + MER5A DNA MER1_type 9 189 0 390 246 61 0 chr17 64536246 64536360 -20902120 + MIR SINE MIR 63 183 -79 369 0 0 0 chr17 64536500 64536541 -20901939 + (CA)n Simple_repeat Simple_repeat 2 42 0 2205 99 0 3 chr17 64536628 64536930 -20901550 - AluSx SINE Alu -11 301 1 1966 82 9 88 chr17 64536932 64537262 -20901218 - AluSx SINE Alu 0 312 9 182 219 0 0 chr17 64538313 64538354 -20900126 + L2 LINE L2 3271 3311 -2 1757 145 7 3 chr17 64538502 64538785 -20899695 - AluJb SINE Alu -28 284 1 242 224 7 57 chr17 64539729 64539865 -20898615 + MIR SINE MIR 41 231 -31 2260 108 0 0 chr17 64540124 64540431 -20898049 + AluSx SINE Alu 1 307 -5 310 180 191 34 chr17 64540563 64540652 -20897828 - L2 LINE L2 -12 3301 3199 2288 98 0 3 chr17 64540918 64541223 -20897257 - AluSx SINE Alu -8 304 1 573 242 129 46 chr17 64544052 64544246 -20894234 + MIR SINE MIR 2 211 -51 294 304 257 0 chr17 64544363 64544511 -20893969 - MIR SINE MIR -21 241 56 220 289 51 58 chr17 64545107 64545183 -20893297 + MER5A DNA MER1_type 1 76 -113 2380 65 3 0 chr17 64545183 64545496 -20892984 + AluY SINE Alu 1 306 0 220 289 51 58 chr17 64545496 64545575 -20892905 + MER5A DNA MER1_type 76 155 -34 301 255 128 10 chr17 64545592 64545694 -20892786 - MIR3 SINE MIR -52 156 43 336 251 246 6 chr17 64546694 64546865 -20891615 - MIR SINE MIR -25 237 26 745 250 71 19 chr17 64548592 64548804 -20889676 + MIR SINE MIR 25 247 -15 180 77 0 0 chr17 64549590 64549616 -20888864 + (CCCTG)n Simple_repeat Simple_repeat 1 26 0 2351 77 3 0 chr17 64550054 64550354 -20888126 - AluSq SINE Alu -12 301 1 2283 103 3 0 chr17 64550600 64550911 -20887569 + AluSp SINE Alu 1 312 -1 198 0 0 0 chr17 64550924 64550946 -20887534 + (T)n Simple_repeat Simple_repeat 1 22 0 1719 181 0 3 chr17 64550995 64551293 -20887187 + AluJb SINE Alu 1 297 -15 676 126 19 0 chr17 64551319 64551422 -20887058 + U6 snRNA snRNA 2 106 -1 631 259 45 21 chr17 64551455 64551741 -20886739 - Charlie7 DNA MER1_type -244 2368 2076 476 157 0 24 chr17 64551745 64551828 -20886652 + FLAM_A SINE Alu 40 120 -22 334 264 201 0 chr17 64551828 64551972 -20886508 - Charlie7 DNA MER1_type -673 1939 1767 776 208 107 9 chr17 64551975 64552191 -20886289 - Charlie7 DNA MER1_type -2041 571 335 2023 110 0 13 chr17 64552272 64552590 -20885890 + AluSx SINE Alu 1 312 0 289 224 168 8 chr17 64552606 64552731 -20885749 - L1ME4a LINE L1 -12 6109 5965 356 318 19 9 chr17 64552735 64552842 -20885638 - L1ME4a LINE L1 -199 5922 5815 1746 158 0 29 chr17 64552943 64553254 -20885226 - AluJb SINE Alu -10 302 1 1832 93 4 43 chr17 64553383 64553584 -20884896 - MER1B DNA MER1_type -2373 339 149 2208 71 7 0 chr17 64553584 64553894 -20884586 + AluSq SINE Alu 1 312 0 1832 93 4 43 chr17 64553894 64553971 -20884509 - MER1B DNA MER1_type -2563 149 71 223 297 66 0 chr17 64554397 64554488 -20883992 - MIR SINE MIR -60 202 106 2409 70 3 0 chr17 64554566 64554866 -20883614 - AluSp SINE Alu -12 301 1 180 0 0 0 chr17 64554971 64554991 -20883489 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1579 66 0 0 chr17 64555105 64555302 -20883178 + AluY SINE Alu 98 294 -17 492 149 240 16 chr17 64558772 64558893 -20879587 + MIR SINE MIR 12 159 -103 2166 107 0 3 chr17 64558901 64559200 -20879280 + AluSx SINE Alu 9 306 -6 377 231 109 90 chr17 64561238 64561394 -20877086 + MIR SINE MIR 66 224 -38 480 293 165 43 chr17 64561774 64562126 -20876354 - L2 LINE L2 -354 2960 2566 336 102 0 0 chr17 64562134 64562183 -20876297 + (TG)n Simple_repeat Simple_repeat 2 50 0 261 250 0 0 chr17 64562769 64562821 -20875659 + LTR30 LTR ERV1 1 52 -670 1209 99 32 86 chr17 64562823 64563044 -20875436 + LTR12 LTR ERV1 59 267 -447 388 230 30 0 chr17 64563073 64563173 -20875307 + LTR30 LTR ERV1 553 655 -67 2398 77 0 0 chr17 64563192 64563490 -20874990 + AluY SINE Alu 1 298 -13 633 111 8 0 chr17 64563490 64563593 -20874887 + LTR12 LTR ERV1 494 714 0 617 172 89 19 chr17 64565126 64565283 -20873197 - MIR SINE MIR -1 261 94 1992 112 30 10 chr17 64565613 64565916 -20872564 - AluSx SINE Alu -3 309 1 2299 99 0 0 chr17 64566105 64566407 -20872073 + AluSc SINE Alu 1 302 -7 2009 113 10 3 chr17 64566796 64567096 -20871384 - AluSp SINE Alu -10 303 2 1050 237 13 62 chr17 64567399 64567698 -20870782 - L1ME1 LINE L1 -40 6126 5847 1479 189 7 18 chr17 64567701 64568007 -20870473 - AluJo SINE Alu 0 303 1 1850 122 43 30 chr17 64568008 64568311 -20870169 - AluSq SINE Alu -6 307 1 213 182 0 0 chr17 64568358 64568413 -20870067 + (CA)n Simple_repeat Simple_repeat 2 56 0 2131 104 0 49 chr17 64569770 64570098 -20868382 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 64571430 64571473 -20867007 + GC_rich Low_complexity Low_complexity 1 43 0 30 27 0 0 chr17 64571593 64571630 -20866850 + GC_rich Low_complexity Low_complexity 1 37 0 21 82 0 0 chr17 64571726 64571775 -20866705 + GC_rich Low_complexity Low_complexity 1 49 0 391 267 68 23 chr17 64571999 64572175 -20866305 + MER5A DNA MER1_type 6 189 0 210 236 91 27 chr17 64574687 64574797 -20863683 + L2 LINE L2 2859 2975 -338 254 352 64 8 chr17 64575136 64575261 -20863219 + L2 LINE L2 3127 3258 -14 1429 165 24 4 chr17 64575267 64575516 -20862964 + AluJo SINE Alu 45 298 -14 2298 76 7 0 chr17 64575643 64575945 -20862535 - AluY SINE Alu -7 304 1 266 205 60 72 chr17 64575988 64576071 -20862409 - L2 LINE L2 -21 3292 3211 2090 110 16 3 chr17 64576599 64576907 -20861573 + AluSx SINE Alu 1 312 0 602 146 0 10 chr17 64577151 64577247 -20861233 - AluJb SINE Alu -12 300 206 2231 113 0 7 chr17 64577952 64578262 -20860218 - AluSx SINE Alu -4 308 1 194 303 67 11 chr17 64579002 64579091 -20859389 - L2 LINE L2 -7 3306 3213 2168 114 13 0 chr17 64580138 64580446 -20858034 - AluSx SINE Alu 0 312 1 386 341 8 8 chr17 64581877 64582000 -20856480 + L2 LINE L2 3150 3272 0 235 260 39 39 chr17 64582064 64582141 -20856339 - MER5A DNA MER1_type -1 188 112 2122 105 7 3 chr17 64582152 64582448 -20856032 - AluSx SINE Alu -15 297 1 628 161 8 25 chr17 64582465 64582583 -20855897 - MER5A DNA MER1_type -73 116 1 230 231 23 154 chr17 64582692 64582822 -20855658 + MER102b DNA MER1_type 229 341 0 203 268 0 0 chr17 64583654 64583695 -20854785 + L2 LINE L2 3218 3258 -14 1194 154 0 41 chr17 64583711 64583932 -20854548 + AluJo SINE Alu 1 212 -100 925 233 96 14 chr17 64584836 64585264 -20853216 + LTR33 LTR ERVL 1 521 0 274 376 0 8 chr17 64585546 64585674 -20852806 - MIR SINE MIR -56 152 45 204 158 0 0 chr17 64586226 64586264 -20852216 + C-rich Low_complexity Low_complexity 4 41 0 186 133 0 0 chr17 64586260 64586290 -20852190 + (TTTTC)n Simple_repeat Simple_repeat 3 32 0 * 530 171 81 57 chr17 64586543 64586754 -20851726 - MER33 DNA MER1_type 0 363 148 9333 132 24 21 chr17 64586755 64587020 -20851460 - L1MCa LINE L1 -4745 1681 1418 191 36 36 0 chr17 64587020 64587048 -20851432 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9333 132 24 21 chr17 64587048 64588262 -20850218 - L1MCa LINE L1 -5008 1418 194 2176 81 0 3 chr17 64588262 64588545 -20849935 - AluSx SINE Alu -5 307 26 9333 132 24 21 chr17 64588545 64588712 -20849768 - L1MCa LINE L1 -6232 194 29 459 240 62 20 chr17 64588741 64588887 -20849593 - MER33 DNA MER1_type -166 158 7 506 79 53 0 chr17 64588895 64588971 -20849509 - MADE1 DNA Mariner 0 80 1 2032 130 17 0 chr17 64589402 64589701 -20848779 + AluSx SINE Alu 1 304 -8 182 62 31 0 chr17 64592113 64592145 -20846335 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 1683 174 3 7 chr17 64592667 64592966 -20845514 - AluJb SINE Alu -14 298 1 532 260 3 135 chr17 64593138 64593426 -20845054 + MIR SINE MIR 7 256 -6 2179 101 13 3 chr17 64594025 64594331 -20844149 - AluSx SINE Alu -3 309 1 420 214 77 34 chr17 64594392 64594509 -20843971 - MER5A DNA MER1_type 0 189 68 238 250 107 36 chr17 64594420 64594532 -20843948 + MER5A DNA MER1_type 36 155 -34 * 984 113 0 0 chr17 64594788 64594921 -20843559 + FLAM_C SINE Alu 1 133 0 1330 188 67 14 chr17 64595444 64595726 -20842754 - AluJo SINE Alu -5 297 1 1762 143 0 26 chr17 64596337 64596644 -20841836 - AluJb SINE Alu -13 299 1 326 225 16 86 chr17 64596855 64596983 -20841497 + L1MC4 LINE L1 1961 6983 -1339 306 268 39 71 chr17 64596914 64596992 -20841488 - L1MC4 LINE L1 -1338 6704 6625 * 1600 184 18 0 chr17 64596992 64597275 -20841205 - AluJb SINE Alu -24 288 1 306 268 39 71 chr17 64597275 64597303 -20841177 - L1MC4 LINE L1 -1417 6625 6600 2193 98 0 13 chr17 64597303 64597608 -20840872 + AluSg SINE Alu 1 301 -9 306 268 39 71 chr17 64597608 64597627 -20840853 - L1MC4 LINE L1 -1442 6600 6582 458 317 34 75 chr17 64597858 64598015 -20840465 - MIR SINE MIR -4 258 115 2112 88 3 0 chr17 64598015 64598333 -20840147 + AluSg SINE Alu 1 310 0 458 317 34 75 chr17 64598333 64598440 -20840040 - MIR SINE MIR -147 115 5 378 297 55 68 chr17 64598447 64598666 -20839814 + L1ME LINE L1 5040 5255 -891 1973 131 0 7 chr17 64598668 64598966 -20839514 - AluSx SINE Alu -16 296 1 434 307 23 23 chr17 64598978 64599193 -20839287 + L1ME LINE L1 5465 5679 -442 596 251 231 44 chr17 64599262 64600112 -20838368 + L1ME4a LINE L1 4145 5216 -930 2167 113 0 0 chr17 64600112 64600414 -20838066 + AluSx SINE Alu 1 302 -10 596 251 231 44 chr17 64600414 64600578 -20837902 + L1ME4a LINE L1 5216 5348 -798 800 160 0 0 chr17 64600578 64600703 -20837777 + FLAM_C SINE Alu 1 125 -18 910 253 137 32 chr17 64600705 64601258 -20837222 + L1ME4a LINE L1 5329 5939 -231 1944 121 13 3 chr17 64601304 64601602 -20836878 + AluSx SINE Alu 1 301 -11 286 204 167 28 chr17 64601998 64602106 -20836374 + L1ME4a LINE L1 5955 6077 -44 360 0 0 0 chr17 64605462 64605502 -20832978 + (CA)n Simple_repeat Simple_repeat 1 40 0 479 340 22 11 chr17 64605502 64605687 -20832793 - MIR SINE MIR -73 189 3 2068 116 0 0 chr17 64606418 64606737 -20831743 + AluSx SINE Alu 1 319 0 2113 78 24 17 chr17 64606786 64607082 -20831398 - AluSp SINE Alu -15 298 1 411 21 0 0 chr17 64607451 64607499 -20830981 + (TG)n Simple_repeat Simple_repeat 2 49 0 422 252 47 0 chr17 64607849 64607976 -20830504 - L1ME4a LINE L1 0 6121 5989 1601 134 119 11 chr17 64608060 64608329 -20830151 - AluJo SINE Alu -4 298 1 266 315 37 46 chr17 64608360 64608468 -20830012 + MER102b DNA MER1_type 232 338 -3 879 273 96 12 chr17 64608531 64608875 -20829605 - L1ME4a LINE L1 -255 5866 5494 2280 72 7 13 chr17 64609094 64609399 -20829081 - AluY SINE Alu -8 303 1 2298 105 0 3 chr17 64609408 64609721 -20828759 - AluSx SINE Alu 0 312 1 311 224 30 0 chr17 64609721 64609788 -20828692 - L1ME4a LINE L1 -813 5333 5265 619 154 4 11 chr17 64610088 64610332 -20828148 - AluJb SINE Alu 0 312 3 474 292 123 5 chr17 64610422 64610617 -20827863 - MIR SINE MIR -25 237 20 1920 128 20 3 chr17 64610767 64611073 -20827407 + AluSx SINE Alu 1 311 -1 448 289 60 20 chr17 64612041 64612190 -20826290 + MIR SINE MIR 14 168 -94 1708 74 43 0 chr17 64612190 64612421 -20826059 + AluSx SINE Alu 58 298 -14 2147 129 0 0 chr17 64612494 64612805 -20825675 - AluSq SINE Alu -2 311 1 219 125 0 0 chr17 64613846 64613886 -20824594 + (GA)n Simple_repeat Simple_repeat 1 40 0 192 111 289 0 chr17 64614897 64614942 -20823538 + MIR SINE MIR 86 143 -119 2013 90 0 28 chr17 64615519 64615838 -20822642 + AluSg SINE Alu 3 313 0 1664 146 7 27 chr17 64615856 64616150 -20822330 + AluJb SINE Alu 1 288 -24 330 280 32 11 chr17 64618624 64618717 -20819763 + MIR SINE MIR 58 152 -56 510 219 192 0 chr17 64618737 64618883 -20819597 + MER5A DNA MER1_type 10 183 -6 343 327 43 37 chr17 64618904 64619067 -20819413 - MER5A DNA MER1_type -8 181 8 2279 97 3 0 chr17 64619140 64619449 -20819031 + AluSx SINE Alu 1 310 -2 394 345 72 55 chr17 64619771 64620038 -20818442 + L2 LINE L2 2275 2557 -757 876 124 0 44 chr17 64620038 64620175 -20818305 - FLAM_C SINE Alu -2 131 1 394 345 72 55 chr17 64620175 64620420 -20818060 + L2 LINE L2 2557 2796 -518 2091 105 0 24 chr17 64620514 64620808 -20817672 - AluSx SINE Alu -25 287 1 463 257 178 7 chr17 64620820 64620972 -20817508 - MER5A DNA MER1_type -6 183 6 231 293 238 17 chr17 64621026 64621316 -20817164 + L2 LINE L2 2917 3270 -2 2100 123 0 0 chr17 64621473 64621774 -20816706 - AluSx SINE Alu -11 301 1 306 262 56 47 chr17 64621977 64622084 -20816396 - MIR SINE MIR -119 143 36 1773 154 0 11 chr17 64623233 64623368 -20815112 + AluJo SINE Alu 1 136 -176 2140 97 3 7 chr17 64623368 64623698 -20814782 + AluSp SINE Alu 1 313 0 1773 154 0 11 chr17 64623698 64623847 -20814633 + AluJo SINE Alu 136 282 -30 186 43 0 0 chr17 64623850 64623873 -20814607 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 775 257 55 24 chr17 64623991 64624244 -20814236 - MIR SINE MIR 0 262 2 813 90 4 2 chr17 64625520 64625778 -20812702 + AluSx SINE Alu 1 307 -2 2016 106 28 0 chr17 64626889 64627172 -20811308 - AluSx SINE Alu -21 291 1 2249 113 0 0 chr17 64628813 64629123 -20809357 - AluSq SINE Alu -3 310 1 249 33 0 0 chr17 64629432 64629462 -20809018 + (CAG)n Simple_repeat Simple_repeat 1 30 0 2041 107 7 3 chr17 64629949 64630247 -20808233 - AluSx SINE Alu -13 299 1 640 247 105 53 chr17 64630327 64630574 -20807906 + MIR SINE MIR 2 261 -1 28 48 0 0 chr17 64630904 64630946 -20807534 + AT_rich Low_complexity Low_complexity 1 42 0 2288 96 0 16 chr17 64632466 64632779 -20805701 + AluSx SINE Alu 1 308 -4 1775 144 31 7 chr17 64633322 64633613 -20804867 + AluJo SINE Alu 1 298 -14 2337 91 3 0 chr17 64633620 64633929 -20804551 + AluSp SINE Alu 1 310 -3 223 289 0 66 chr17 64634158 64634234 -20804246 - L2 LINE L2 -10 3303 3233 2312 88 0 13 chr17 64634849 64635156 -20803324 - AluSx SINE Alu -9 303 1 670 240 47 26 chr17 64635424 64635616 -20802864 + MLT1J1 LTR MaLR 244 439 -7 1953 121 0 10 chr17 64635638 64635928 -20802552 + AluSg SINE Alu 1 287 -23 1785 277 115 20 chr17 64635999 64636814 -20801666 - L1MC4 LINE L1 -2 8040 7110 1821 137 14 0 chr17 64636814 64637115 -20801365 - AluSx SINE Alu 0 305 1 1785 277 115 20 chr17 64637115 64637299 -20801181 - L1MC4 LINE L1 -932 7110 6945 3959 142 62 0 chr17 64637304 64637945 -20800535 - L1PA16 LINE L1 -5 6161 5481 2119 111 3 0 chr17 64637945 64638242 -20800238 - AluSx SINE Alu -14 298 1 1849 117 0 0 chr17 64638253 64638518 -20799962 - AluY SINE Alu -8 303 39 461 312 202 44 chr17 64638632 64638976 -20799504 - L2 LINE L2 -217 3096 2808 2109 123 0 0 chr17 64638976 64639278 -20799202 - AluSx SINE Alu -10 302 1 461 312 202 44 chr17 64639278 64639499 -20798981 - L2 LINE L2 -505 2808 2623 2738 76 28 11 chr17 64639499 64639854 -20798626 + THE1B LTR MaLR 1 361 -3 461 312 202 44 chr17 64639854 64640029 -20798451 - L2 LINE L2 -690 2623 2222 1113 153 10 10 chr17 64640094 64640297 -20798183 + Charlie4a DNA MER1_type 50 252 -256 904 196 67 19 chr17 64640283 64640492 -20797988 + Charlie4a DNA MER1_type 274 492 -16 * 504 307 235 28 chr17 64640495 64641927 -20796553 - L2 LINE L2 -1122 2192 464 2176 105 0 13 chr17 64642175 64642489 -20795991 + AluSg SINE Alu 1 310 0 2036 104 0 0 chr17 64642534 64642814 -20795666 - AluSx SINE Alu -19 293 14 307 207 49 49 chr17 64642975 64643057 -20795423 + HAL1b LINE L1 1055 1136 -212 22 0 0 0 chr17 64643168 64643190 -20795290 + AT_rich Low_complexity Low_complexity 1 22 0 1548 162 73 0 chr17 64643220 64643492 -20794988 - AluJo SINE Alu -14 298 7 2451 198 9 11 chr17 64644614 64644844 -20793636 + MER66B LTR ERV1 28 258 -228 1906 126 33 3 chr17 64644844 64645145 -20793335 + AluSx SINE Alu 3 312 0 2451 198 9 11 chr17 64645145 64645374 -20793106 + MER66B LTR ERV1 258 486 0 276 262 215 19 chr17 64645380 64645487 -20792993 - L2 LINE L2 -6 3307 3180 353 344 61 38 chr17 64645613 64645875 -20792605 - L2 LINE L2 -442 2872 2605 467 114 4 2 chr17 64645876 64646105 -20792375 + AluSx SINE Alu 27 303 -9 746 204 27 107 chr17 64647144 64647216 -20791264 + MER3 DNA MER1_type 3 79 -130 2137 119 0 0 chr17 64647216 64647527 -20790953 + AluSx SINE Alu 1 311 -1 746 204 27 107 chr17 64647527 64647679 -20790801 + MER3 DNA MER1_type 79 209 0 284 282 136 18 chr17 64648758 64648868 -20789612 - MIR SINE MIR -79 183 61 2239 99 3 0 chr17 64649744 64650046 -20788434 - AluSg SINE Alu -7 303 1 234 0 0 0 chr17 64650596 64650622 -20787858 + (T)n Simple_repeat Simple_repeat 1 26 0 20158 49 0 9 chr17 64650661 64653942 -20784538 + L1PA6 LINE L1 2872 6147 -7 506 222 17 148 chr17 64655001 64655298 -20783182 + MIR SINE MIR 5 262 0 2824 6 0 0 chr17 64656183 64656496 -20781984 + AluYb8 SINE Alu 1 313 -5 1932 126 14 7 chr17 64657055 64657341 -20781139 + AluSx SINE Alu 1 288 -24 2098 121 0 0 chr17 64657579 64657877 -20780603 - AluSx SINE Alu -14 298 1 322 302 0 0 chr17 64659694 64659780 -20778700 + MIR SINE MIR 60 145 -117 1074 140 0 8 chr17 64659880 64660356 -20778124 + (CCA)n Simple_repeat Simple_repeat 1 472 0 1098 124 1 14 chr17 64660371 64660801 -20777679 + (CCA)n Simple_repeat Simple_repeat 1 600 0 1098 112 0 0 chr17 64660801 64660979 -20777501 + (CCA)n Simple_repeat Simple_repeat 3 180 0 932 133 0 6 chr17 64661452 64661633 -20776847 + (CCA)n Simple_repeat Simple_repeat 1 180 0 183 235 0 0 chr17 64661668 64661719 -20776761 + (CCA)n Simple_repeat Simple_repeat 1 51 0 258 32 0 0 chr17 64662758 64662789 -20775691 + (A)n Simple_repeat Simple_repeat 1 31 0 1932 102 46 0 chr17 64663410 64663693 -20774787 - AluSx SINE Alu -16 296 1 368 322 164 19 chr17 64663781 64663995 -20774485 - MARNA DNA Mariner -82 504 260 1648 139 3 85 chr17 64664108 64664439 -20774041 + AluJb SINE Alu 1 304 -8 400 203 113 15 chr17 64664501 64664613 -20773867 + L1MB8 LINE L1 6039 6167 -17 2209 79 7 3 chr17 64664613 64664905 -20773575 - AluSq SINE Alu -20 293 1 400 203 113 15 chr17 64664905 64664925 -20773555 + L1MB8 LINE L1 6167 6184 0 653 318 158 47 chr17 64665167 64665743 -20772737 - L2 LINE L2 -639 2675 2164 681 137 137 0 chr17 64665743 64665860 -20772620 + FLAM_C SINE Alu 1 133 0 653 318 158 47 chr17 64665860 64666546 -20771934 - L2 LINE L2 -1150 2164 1273 1125 251 190 27 chr17 64666554 64666867 -20771613 + L2 LINE L2 2455 2716 -597 2213 95 7 0 chr17 64666867 64667172 -20771308 + AluSp SINE Alu 1 307 -6 1125 251 190 27 chr17 64667172 64667595 -20770885 + L2 LINE L2 2716 3313 0 195 235 99 74 chr17 64667600 64667681 -20770799 - L2 LINE L2 -2055 1259 1177 286 226 71 148 chr17 64668476 64668548 -20769932 - MIR SINE MIR -50 212 157 2235 72 16 10 chr17 64668548 64668854 -20769626 - AluY SINE Alu -3 308 1 286 226 71 148 chr17 64668854 64668936 -20769544 - MIR SINE MIR -105 157 70 517 295 117 65 chr17 64669519 64669623 -20768857 - L2 LINE L2 0 3272 3175 2190 101 3 0 chr17 64669623 64669921 -20768559 - AluSq SINE Alu -14 299 1 517 295 117 65 chr17 64669921 64670346 -20768134 - L2 LINE L2 -97 3175 2706 450 189 0 22 chr17 64670346 64670436 -20768044 - AluJ/FRAM SINE Alu -2 310 223 1240 163 32 40 chr17 64670456 64670707 -20767773 + AluJo SINE Alu 47 295 -17 341 289 19 94 chr17 64670707 64670866 -20767614 - L2 LINE L2 -604 2710 2564 2027 116 14 0 chr17 64670923 64671217 -20767263 - AluSx SINE Alu -14 298 1 924 236 35 0 chr17 64671251 64671454 -20767026 - MIR SINE MIR -38 224 15 413 311 182 17 chr17 64671456 64672052 -20766428 - L2 LINE L2 -767 2547 1769 263 291 68 19 chr17 64672217 64672320 -20766160 - L2 LINE L2 -13 3300 3193 1744 119 45 11 chr17 64673049 64673351 -20765129 + AluSx SINE Alu 19 329 0 200 241 0 37 chr17 64673957 64674011 -20764469 + GA-rich Low_complexity Low_complexity 6 57 0 363 137 0 0 chr17 64724151 64724202 -20714278 - FRAM/FAM SINE Alu -115 60 10 1304 158 75 45 chr17 64724212 64724280 -20714200 + Tigger2 DNA MER2_type 2418 2482 -236 1615 197 0 23 chr17 64724280 64724590 -20713890 - AluJb SINE Alu -9 303 1 1304 158 75 45 chr17 64724590 64724813 -20713667 + Tigger2 DNA MER2_type 2482 2718 0 3516 147 36 45 chr17 64724813 64725365 -20713115 - L1MC3 LINE L1 -743 5403 5370 2290 119 7 0 chr17 64725365 64725675 -20712805 - AluSx SINE Alu 0 312 1 3516 147 36 45 chr17 64725675 64725823 -20712657 - L1MC3 LINE L1 -776 5370 5222 1341 162 11 86 chr17 64725825 64726103 -20712377 - AluJo SINE Alu -8 304 48 361 99 0 161 chr17 64726114 64726195 -20712285 - L1MC3 LINE L1 -893 5253 5186 311 215 11 75 chr17 64726212 64726305 -20712175 - Charlie1a DNA MER1_type -1242 213 127 592 223 144 0 chr17 64726323 64726462 -20712018 - Charlie1a DNA MER1_type -1296 159 1 2075 105 22 0 chr17 64726695 64727017 -20711463 - AluSc SINE Alu 0 328 1 1655 153 20 0 chr17 64727121 64727370 -20711110 - AluJo SINE Alu -58 254 1 9806 184 127 36 chr17 64727514 64727838 -20710642 + L1MD1 LINE L1 42 335 -6205 1691 220 35 35 chr17 64727838 64727999 -20710481 + MLT1A2 LTR MaLR 3 163 -211 1987 121 7 30 chr17 64727999 64728304 -20710176 + AluSx SINE Alu 1 298 -14 1691 220 35 35 chr17 64728304 64728514 -20709966 + MLT1A2 LTR MaLR 162 374 0 9806 184 127 36 chr17 64728514 64729085 -20709395 + L1MD1 LINE L1 335 853 -5687 2019 126 33 3 chr17 64729085 64729386 -20709094 - AluSp SINE Alu -3 310 1 9806 184 127 36 chr17 64729386 64730331 -20708149 + L1MD1 LINE L1 853 1711 -4829 225 0 0 0 chr17 64730331 64730356 -20708124 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2023 107 0 7 chr17 64730359 64730631 -20707849 - AluSx SINE Alu -42 270 1 9806 184 127 36 chr17 64730631 64731439 -20707041 + L1MD1 LINE L1 1712 2937 -3603 4064 238 36 40 chr17 64731427 64732165 -20706315 + L1MD1 LINE L1 3201 3940 -2600 * 1811 150 0 18 chr17 64732165 64732451 -20706029 + AluJb SINE Alu 3 283 -29 4064 238 36 40 chr17 64732451 64733603 -20704877 + L1MD1 LINE L1 3940 5052 -1488 21 36 0 0 chr17 64734388 64734416 -20704064 + AT_rich Low_complexity Low_complexity 1 28 0 4117 163 54 54 chr17 64734534 64735071 -20703409 + L1MD1 LINE L1 5066 5602 -1034 6553 85 17 21 chr17 64735071 64735867 -20702613 + L1PA14 LINE L1 4897 5673 -488 2430 61 27 0 chr17 64735867 64736162 -20702318 + AluY SINE Alu 1 303 -8 6553 85 17 21 chr17 64736162 64736640 -20701840 + L1PA14 LINE L1 5673 6152 -9 4117 163 54 54 chr17 64736640 64737053 -20701427 + L1MD1 LINE L1 5602 6014 -622 2392 67 6 22 chr17 64737053 64737366 -20701114 + AluSq SINE Alu 1 308 -5 2306 115 0 0 chr17 64737376 64737688 -20700792 + AluSx SINE Alu 1 312 0 4117 163 54 54 chr17 64737688 64738141 -20700339 + L1MD1 LINE L1 6023 6461 -175 2349 76 3 3 chr17 64738224 64738526 -20699954 + AluY SINE Alu 1 302 -9 257 303 10 20 chr17 64738718 64738817 -20699663 - L2 LINE L2 -527 2787 2690 2290 205 82 22 chr17 64738822 64739423 -20699057 - L1MC4 LINE L1 -329 7713 7077 1053 182 0 0 chr17 64739577 64739753 -20698727 - AluSg/x SINE Alu 0 310 135 2144 139 0 0 chr17 64740442 64740752 -20697728 + AluSx SINE Alu 1 310 -2 403 327 144 47 chr17 64740855 64741363 -20697117 - L2 LINE L2 -412 2902 2445 2200 88 16 26 chr17 64741363 64741530 -20696950 - AluSq SINE Alu -9 304 140 2019 84 0 118 chr17 64741530 64741862 -20696618 - AluSc SINE Alu -16 293 1 2200 88 16 26 chr17 64741862 64742001 -20696479 - AluSq SINE Alu -173 140 1 2024 130 10 3 chr17 64742004 64742303 -20696177 - AluJo SINE Alu -11 301 1 403 327 144 47 chr17 64742303 64742387 -20696093 - L2 LINE L2 -870 2444 2248 2143 121 3 0 chr17 64742631 64742928 -20695552 - AluSx SINE Alu -14 298 1 2225 54 0 0 chr17 64743005 64743263 -20695217 + AluSc SINE Alu 52 309 0 2174 125 3 0 chr17 64744523 64744827 -20693653 + AluSx SINE Alu 1 305 -7 280 312 142 7 chr17 64745451 64745592 -20692888 - MARNA DNA Mariner -255 331 172 400 317 25 0 chr17 64745592 64745712 -20692768 + L2 LINE L2 3150 3272 0 1546 108 0 0 chr17 64745798 64746002 -20692478 + AluSg/x SINE Alu 100 303 -9 1983 149 21 54 chr17 64746007 64746395 -20692085 - THE1C LTR MaLR 0 375 1 1264 141 224 107 chr17 64746445 64746771 -20691709 + MSTA LTR MaLR 1 428 0 484 139 51 0 chr17 64747529 64747608 -20690872 + AluJ/FLAM SINE Alu 1 83 -229 919 117 0 44 chr17 64747608 64747745 -20690735 + AluSg/x SINE Alu 164 294 -16 2097 132 3 13 chr17 64748396 64748707 -20689773 + AluSx SINE Alu 1 308 -4 455 226 32 16 chr17 64749729 64749853 -20688627 - MIR3 SINE MIR -13 195 70 1809 127 112 0 chr17 64749932 64750200 -20688280 - AluSx SINE Alu -14 298 1 2025 121 25 0 chr17 64750722 64751033 -20687447 + AluSc SINE Alu 1 318 0 271 210 185 0 chr17 64751161 64751242 -20687238 - MER96B DNA MER1_type? 0 417 322 2222 134 0 0 chr17 64751279 64751584 -20686896 + AluSq SINE Alu 1 305 -8 1133 214 5 0 chr17 64751585 64751791 -20686689 - MER2 DNA MER2_type -138 207 1 448 138 0 0 chr17 64751980 64752045 -20686435 - MER58 DNA MER1_type -1 2419 2355 770 143 7 65 chr17 64752191 64752345 -20686135 + MER96B DNA MER1_type? 91 235 -182 360 0 0 0 chr17 64752379 64752419 -20686061 + (TG)n Simple_repeat Simple_repeat 2 41 0 2379 98 3 0 chr17 64752708 64753015 -20685465 - AluSq SINE Alu -5 308 1 532 235 10 0 chr17 64753385 64753487 -20684993 - MER81 DNA DNA -6 108 6 676 121 0 0 chr17 64753501 64753600 -20684880 + AluSg/x SINE Alu 198 296 -16 264 167 0 0 chr17 64754277 64754325 -20684155 + (CA)n Simple_repeat Simple_repeat 1 48 0 238 189 67 89 chr17 64754842 64754932 -20683548 + L2 LINE L2 3182 3269 -44 1625 184 23 23 chr17 64754945 64755250 -20683230 + AluJo SINE Alu 1 305 -7 323 273 23 0 chr17 64755283 64755371 -20683109 + L1MC4 LINE L1 6614 6703 -1339 226 87 0 0 chr17 64755379 64755425 -20683055 + LTR66 LTR ERVL 394 439 -171 2359 113 0 0 chr17 64755436 64755746 -20682734 - AluSx SINE Alu -2 310 1 201 74 0 0 chr17 64756855 64756882 -20681598 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2251 85 0 3 chr17 64757638 64758012 -20680468 - AluY SINE Alu 0 373 1 2123 216 47 21 chr17 64758202 64758674 -20679806 - LTR16C LTR ERVL -6 485 2 237 65 0 0 chr17 64759209 64759240 -20679240 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 1076 225 59 26 chr17 64759349 64759620 -20678860 + LTR16C LTR ERVL 1 280 -211 300 336 80 0 chr17 64760087 64760212 -20678268 - MIR3 SINE MIR -18 190 56 352 349 20 0 chr17 64760699 64760845 -20677635 + MIR SINE MIR 69 217 -45 1344 213 127 62 chr17 64761409 64761906 -20676574 + MLT1F LTR MaLR 1 529 -13 2175 117 3 3 chr17 64761923 64762221 -20676259 + AluSg SINE Alu 1 298 -12 201 204 20 20 chr17 64762268 64762317 -20676163 + MIR SINE MIR 85 133 -75 1145 179 5 31 chr17 64763642 64763865 -20674615 + MER20 DNA MER1_type 1 217 -2 180 0 0 0 chr17 64763897 64763917 -20674563 + (A)n Simple_repeat Simple_repeat 1 20 0 302 355 0 8 chr17 64764156 64764277 -20674203 + MIR SINE MIR 28 147 -115 2263 100 0 0 chr17 64764617 64764939 -20673541 + AluSx SINE Alu 1 312 0 1560 176 4 8 chr17 64764946 64765213 -20673267 + AluJb SINE Alu 1 266 -46 394 301 86 16 chr17 64765213 64765399 -20673081 + MIR SINE MIR 52 250 -12 2214 109 3 20 chr17 64765430 64765593 -20672887 - AluSx SINE Alu -15 297 140 2173 102 7 3 chr17 64765593 64765888 -20672592 - AluY SINE Alu -15 296 1 2214 109 3 20 chr17 64765888 64766026 -20672454 - AluSx SINE Alu -172 140 1 2615 119 0 2 chr17 64766332 64766726 -20671754 - L1MA5A LINE L1 -3 6294 5902 1358 117 10 0 chr17 64766924 64767121 -20671359 + AluSg/x SINE Alu 107 305 -5 2217 113 0 19 chr17 64767417 64767735 -20670745 - AluSx SINE Alu 0 312 1 229 182 23 0 chr17 64768647 64768691 -20669789 - MER103 DNA DNA -31 135 91 311 267 224 0 chr17 64769426 64769587 -20668893 - MER117 DNA MER1_type 0 197 1 397 240 17 120 chr17 64769983 64770158 -20668322 + MIR SINE MIR 51 207 -55 1737 173 54 3 chr17 64770412 64770527 -20667953 + AluJb SINE Alu 1 109 -203 498 17 0 0 chr17 64770527 64770586 -20667894 + (CA)n Simple_repeat Simple_repeat 2 60 0 1737 173 54 3 chr17 64770586 64770765 -20667715 + AluJb SINE Alu 109 310 -2 309 340 30 0 chr17 64771483 64771583 -20666897 - MIR SINE MIR -140 122 20 333 185 37 12 chr17 64771692 64771773 -20666707 - MIR SINE MIR -66 196 114 3819 151 38 30 chr17 64771836 64772600 -20665880 + L1MB8 LINE L1 5409 6178 0 713 210 61 22 chr17 64772609 64772790 -20665690 + L1ME2 LINE L1 5328 5515 -649 1166 169 30 38 chr17 64772801 64773037 -20665443 + MER34 LTR ERV1 27 260 -282 900 221 88 0 chr17 64773067 64773271 -20665209 + MER34 LTR ERV1 321 542 0 2850 192 53 25 chr17 64773271 64773503 -20664977 + L1ME2 LINE L1 5512 5736 -428 1874 201 39 10 chr17 64773503 64773886 -20664594 - MSTD LTR MaLR -2 394 1 2850 192 53 25 chr17 64773886 64774288 -20664192 + L1ME2 LINE L1 5736 6164 0 3536 191 241 10 chr17 64774299 64775213 -20663267 + L1MC4 LINE L1 6390 7514 -528 211 195 0 24 chr17 64775220 64775261 -20663219 + GA-rich Low_complexity Low_complexity 6 45 0 464 181 86 0 chr17 64775261 64775366 -20663114 + L1MC4 LINE L1 7929 8042 0 2026 266 38 8 chr17 64775389 64775886 -20662594 + LTR40a LTR ERVL 1 512 -7 28 0 0 0 chr17 64776241 64776269 -20662211 + AT_rich Low_complexity Low_complexity 1 28 0 1850 204 14 8 chr17 64776399 64776762 -20661718 + MLT1A1 LTR MaLR 1 365 0 377 279 131 47 chr17 64776798 64776975 -20661505 - L1ME4a LINE L1 -1 6120 5907 2349 112 0 0 chr17 64776975 64777287 -20661193 - AluSx SINE Alu 0 312 1 377 279 131 47 chr17 64777287 64777406 -20661074 - L1ME4a LINE L1 -214 5907 5799 2082 156 3 30 chr17 64777435 64777808 -20660672 + THE1C LTR MaLR 1 363 -12 1782 151 0 11 chr17 64777814 64778085 -20660395 + AluJo SINE Alu 22 289 -23 2327 119 0 0 chr17 64778630 64778942 -20659538 + AluSx SINE Alu 1 312 0 2320 60 40 17 chr17 64778964 64779263 -20659217 - AluY SINE Alu -5 306 1 836 165 152 0 chr17 64780052 64780216 -20658264 - MER5A DNA MER1_type 0 189 1 2403 118 39 14 chr17 64780374 64780729 -20657751 + THE1B LTR MaLR 1 364 0 420 245 0 10 chr17 64780762 64780864 -20657616 - MER5A DNA MER1_type -80 109 9 297 268 45 45 chr17 64780873 64780985 -20657495 + MIR SINE MIR 3 114 -148 2489 220 76 47 chr17 64781253 64782026 -20656454 - L1ME LINE L1 -5269 801 6 261 226 104 85 chr17 64782429 64782535 -20655945 + LTR16C LTR ERVL 136 243 -248 2265 101 0 3 chr17 64782766 64783091 -20655389 - AluSx SINE Alu 0 324 1 2259 113 0 19 chr17 64786107 64786425 -20652055 - AluSq SINE Alu 0 313 2 668 270 88 22 chr17 64787098 64787324 -20651156 - MLT1K LTR MaLR -78 510 270 2139 116 3 0 chr17 64787352 64787637 -20650843 + AluSx SINE Alu 1 286 -26 270 0 0 0 chr17 64787638 64787668 -20650812 + (TATAA)n Simple_repeat Simple_repeat 3 32 0 1012 276 116 33 chr17 64788453 64788866 -20649614 + LTR16C LTR ERVL 1 455 -36 2081 146 3 10 chr17 64788866 64789039 -20649441 - AluSx SINE Alu -6 306 134 2396 101 0 0 chr17 64789039 64789345 -20649135 - AluSg SINE Alu -4 306 1 2081 146 3 10 chr17 64789345 64789479 -20649001 - AluSx SINE Alu -178 134 1 1012 276 116 33 chr17 64789479 64789514 -20648966 + LTR16C LTR ERVL 455 486 -5 421 301 15 7 chr17 64789971 64790107 -20648373 - MLT1K LTR MaLR -390 159 23 731 110 0 0 chr17 64791720 64791820 -20646660 - LTR12 LTR ERV1 -133 581 482 320 221 0 23 chr17 64791822 64791908 -20646572 - LTR30 LTR ERV1 -79 643 560 775 139 66 46 chr17 64791916 64792067 -20646413 - LTR12 LTR ERV1 -429 285 132 284 211 0 0 chr17 64792076 64792128 -20646352 - LTR30 LTR ERV1 -670 52 1 789 207 83 81 chr17 64792134 64792535 -20645945 + MLT1H1 LTR MaLR 36 524 -43 745 304 82 44 chr17 64792649 64792894 -20645586 - L2 LINE L2 0 3313 3079 1649 133 268 6 chr17 64792894 64793233 -20645247 + MSTA LTR MaLR 1 428 0 745 304 82 44 chr17 64793233 64793641 -20644839 - L2 LINE L2 -234 3079 2634 2267 113 0 3 chr17 64794541 64794841 -20643639 + AluSx SINE Alu 1 299 -13 2213 111 3 0 chr17 64794853 64795150 -20643330 + AluSx SINE Alu 1 298 -14 543 235 17 0 chr17 64795452 64795567 -20642913 + MER58A DNA MER1_type 28 144 0 382 344 77 39 chr17 64795571 64795856 -20642624 + L2 LINE L2 2889 3184 -88 1967 120 3 9 chr17 64795856 64796235 -20642245 - MER4A LTR ERV1 0 664 252 912 193 221 12 chr17 64796259 64796580 -20641900 - Zaphod DNA AcHobo -59 3972 3585 * 2410 194 51 11 chr17 64796547 64797373 -20641107 - Zaphod DNA AcHobo -3026 1005 102 2082 110 24 3 chr17 64797373 64797663 -20640817 - AluSx SINE Alu -16 296 1 2410 194 51 11 chr17 64797663 64797769 -20640711 - Zaphod DNA AcHobo -3929 102 2 318 278 0 0 chr17 64797770 64797842 -20640638 + L2 LINE L2 3185 3256 -16 1361 168 4 39 chr17 64797949 64798133 -20640347 - MER58A DNA MER1_type -2196 224 48 1760 169 48 7 chr17 64798133 64798254 -20640226 + AluJo SINE Alu 1 116 -196 219 69 0 0 chr17 64798254 64798283 -20640197 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1760 169 48 7 chr17 64798283 64798451 -20640029 + AluJo SINE Alu 116 302 -10 1361 168 4 39 chr17 64798451 64798498 -20639982 - MER58A DNA MER1_type -2372 48 1 302 234 40 154 chr17 64798769 64798842 -20639638 - MER5B DNA MER1_type 0 178 98 1612 181 41 101 chr17 64798842 64799017 -20639463 - MLT1B LTR MaLR 0 390 206 2271 99 10 0 chr17 64799017 64799311 -20639169 - AluSc SINE Alu -12 297 1 1612 181 41 101 chr17 64799311 64799550 -20638930 - MLT1B LTR MaLR -184 206 1 302 234 40 154 chr17 64799550 64799677 -20638803 - MER5B DNA MER1_type -80 98 1 229 308 220 30 chr17 64799812 64800212 -20638268 - L2 LINE L2 -813 2501 2026 2053 150 0 0 chr17 64800248 64800548 -20637932 + AluSx SINE Alu 1 300 -12 1291 258 75 44 chr17 64800663 64801066 -20637414 + LTR33 LTR ERVL 55 475 -46 1764 161 3 30 chr17 64801066 64801364 -20637116 + AluJb SINE Alu 3 292 -20 1291 258 75 44 chr17 64801364 64801413 -20637067 + LTR33 LTR ERVL 475 521 0 582 298 58 50 chr17 64801749 64801786 -20636694 - L1ME3 LINE L1 -300 5862 5827 2067 137 0 3 chr17 64801786 64802078 -20636402 - AluSx SINE Alu -21 291 1 582 298 58 50 chr17 64802078 64802100 -20636380 - L1ME3 LINE L1 -335 5827 5807 2258 125 0 0 chr17 64802100 64802411 -20636069 - AluSx SINE Alu -1 311 1 582 298 58 50 chr17 64802411 64802837 -20635643 - L1ME3 LINE L1 -355 5807 5439 1386 189 30 111 chr17 64802967 64803363 -20635117 - MLT1A1 LTR MaLR 0 365 2 378 231 0 0 chr17 64803721 64803799 -20634681 - LTR33A LTR ERVL -2 521 444 244 313 61 17 chr17 64803990 64804105 -20634375 - MLT2E LTR ERVL -473 155 36 25 0 0 0 chr17 64804645 64804670 -20633810 + AT_rich Low_complexity Low_complexity 1 25 0 237 33 0 0 chr17 64804762 64804792 -20633688 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 525 16 0 0 chr17 64804791 64804853 -20633627 + (CA)n Simple_repeat Simple_repeat 1 62 0 1944 118 69 114 chr17 64805020 64805425 -20633055 + MSTD LTR MaLR 10 396 0 1848 155 10 13 chr17 64805829 64806139 -20632341 + AluSx SINE Alu 1 309 -3 365 256 90 0 chr17 64806164 64806297 -20632183 - MIR SINE MIR -52 210 66 374 217 56 100 chr17 64806672 64806852 -20631628 + L2 LINE L2 1633 1804 -1510 1065 293 174 25 chr17 64806852 64807474 -20631006 + L2 LINE L2 2150 2678 -635 1457 138 0 0 chr17 64807474 64807677 -20630803 - AluJb SINE Alu -109 203 1 1065 293 174 25 chr17 64807677 64808063 -20630417 + L2 LINE L2 2678 3312 -1 2461 50 0 17 chr17 64808067 64808364 -20630116 + AluY SINE Alu 2 293 -18 1970 167 3 0 chr17 64808544 64808850 -20629630 + AluJo SINE Alu 1 307 -5 184 299 122 19 chr17 64808885 64808992 -20629488 + L2 LINE L2 2950 3067 -246 216 0 0 0 chr17 64809522 64809546 -20628934 + (A)n Simple_repeat Simple_repeat 1 24 0 300 200 0 38 chr17 64810427 64810507 -20627973 - L1MC5 LINE L1 -54 7907 7831 325 98 0 0 chr17 64810555 64810596 -20627884 + LTR56 LTR ERV1 350 390 -55 22 35 0 0 chr17 64810651 64810680 -20627800 + AT_rich Low_complexity Low_complexity 1 29 0 2158 130 0 7 chr17 64810775 64811083 -20627397 - AluSx SINE Alu -6 306 1 1741 189 11 57 chr17 64811253 64811484 -20626996 - MLT1A2 LTR MaLR -4 370 161 1833 172 7 0 chr17 64811484 64811774 -20626706 + AluJb SINE Alu 1 292 -20 1741 189 11 57 chr17 64811774 64811912 -20626568 - MLT1A2 LTR MaLR -213 161 18 2213 104 27 0 chr17 64812518 64812817 -20625663 + AluSp SINE Alu 1 307 -6 2813 142 0 7 chr17 64812856 64813265 -20625215 - L1PA16 LINE L1 -3 6163 5758 638 314 20 24 chr17 64813416 64813664 -20624816 + MIR SINE MIR 16 262 0 1999 103 4 0 chr17 64814911 64815174 -20623306 - AluSx SINE Alu -10 302 39 31 68 0 0 chr17 64815221 64815280 -20623200 + AT_rich Low_complexity Low_complexity 1 59 0 2285 90 0 3 chr17 64815715 64816015 -20622465 - AluSx SINE Alu -13 299 1 440 206 153 15 chr17 64816042 64816173 -20622307 + MER3 DNA MER1_type 61 209 0 284 200 40 27 chr17 64816227 64816302 -20622178 + MIR SINE MIR 74 149 -113 281 366 44 72 chr17 64816812 64817049 -20621431 + L2 LINE L2 2922 3147 -125 2164 192 8 74 chr17 64817049 64817549 -20620931 + MLT1C LTR MaLR 1 467 0 281 366 44 72 chr17 64817549 64817672 -20620808 + L2 LINE L2 3147 3272 0 1985 119 56 0 chr17 64817745 64818031 -20620449 - AluSx SINE Alu -10 302 1 1139 229 0 30 chr17 64818275 64818506 -20619974 + MER58A DNA MER1_type 1 224 0 22 35 0 0 chr17 64819240 64819269 -20619211 + AT_rich Low_complexity Low_complexity 1 29 0 1944 162 3 0 chr17 64819465 64819761 -20618719 - AluJb SINE Alu -15 297 1 242 365 101 32 chr17 64819797 64820133 -20618347 + L2 LINE L2 1008 1319 -1995 1565 129 4 4 chr17 64820133 64820358 -20618122 - AluSx SINE Alu -77 235 11 242 365 101 32 chr17 64820358 64820746 -20617734 + L2 LINE L2 1319 1782 -1532 660 318 81 60 chr17 64820777 64821528 -20616952 + L1MEd LINE L1 19 802 -5317 1624 115 0 5 chr17 64821528 64821745 -20616735 - AluSg/x SINE Alu -18 294 79 660 318 81 60 chr17 64821745 64822098 -20616382 + L1MEd LINE L1 802 1146 -4973 709 217 40 29 chr17 64822098 64822273 -20616207 + MLT1I LTR MaLR 1 177 -232 805 137 0 15 chr17 64822279 64822410 -20616070 + FRAM SINE Alu 39 167 -9 243 0 0 0 chr17 64822451 64822478 -20616002 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 774 294 45 0 chr17 64822479 64822680 -20615800 + MLT1I LTR MaLR 200 409 0 203 351 142 7 chr17 64822857 64823005 -20615475 - MIR SINE MIR -74 188 21 498 326 37 21 chr17 64823025 64823212 -20615268 - MIR SINE MIR -71 191 2 706 256 191 38 chr17 64823260 64823419 -20615061 + L2 LINE L2 2854 2987 -326 1831 118 0 44 chr17 64823419 64823714 -20614766 - AluJb SINE Alu 0 307 25 706 256 191 38 chr17 64823714 64823952 -20614528 + L2 LINE L2 2987 3313 0 2442 91 0 0 chr17 64824152 64824461 -20614019 - AluSx SINE Alu -3 309 1 2243 102 0 3 chr17 64824462 64824757 -20613723 - AluSx SINE Alu -18 294 1 536 254 0 51 chr17 64824989 64825127 -20613353 - MIR SINE MIR -85 177 47 1372 185 128 62 chr17 64825135 64825329 -20613151 + MLT1C LTR MaLR 1 181 -286 2323 120 0 0 chr17 64825329 64825637 -20612843 + AluSx SINE Alu 1 308 -4 1372 185 128 62 chr17 64825637 64825880 -20612600 + MLT1C LTR MaLR 181 467 0 2264 88 0 29 chr17 64827130 64827437 -20611043 - AluSx SINE Alu -14 298 1 23 33 0 0 chr17 64827856 64827886 -20610594 + AT_rich Low_complexity Low_complexity 1 30 0 1102 108 42 12 chr17 64828778 64828944 -20609536 + AluSg/x SINE Alu 124 294 -18 2068 81 92 4 chr17 64828946 64829219 -20609261 + AluSx SINE Alu 1 297 -15 2782 206 48 107 chr17 64829375 64829442 -20609038 + L1MC5 LINE L1 6502 6571 -1390 917 146 8 0 chr17 64829442 64829572 -20608908 + FLAM_C SINE Alu 1 131 -2 2782 206 48 107 chr17 64829572 64830677 -20607803 + L1MC5 LINE L1 6571 7530 -431 377 273 46 46 chr17 64830770 64830964 -20607516 + L1ME3A LINE L1 5962 6155 -15 3652 190 61 33 chr17 64831007 64831880 -20606600 - L1ME1 LINE L1 0 6166 5270 1280 227 11 0 chr17 64831885 64832163 -20606317 - L1ME1 LINE L1 -1253 4893 4613 302 353 53 0 chr17 64832757 64832927 -20605553 + L1MEc LINE L1 1220 1398 -5427 705 162 0 120 chr17 64832954 64833032 -20605448 + AluJo/FLAM SINE Alu 2 88 -224 2256 74 0 11 chr17 64833032 64833340 -20605140 - AluY SINE Alu 0 305 1 705 162 0 120 chr17 64833340 64833395 -20605085 + AluJo/FLAM SINE Alu 88 121 -191 2204 113 3 0 chr17 64833395 64833688 -20604792 - AluSp SINE Alu -19 294 1 1123 273 46 73 chr17 64833702 64834531 -20603949 + L1MEc LINE L1 1280 2224 -4601 423 249 6 110 chr17 64836833 64837006 -20601474 + MIR SINE MIR 34 188 -74 216 0 0 0 chr17 64837396 64837420 -20601060 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2331 103 0 0 chr17 64837424 64837716 -20600764 - AluSg SINE Alu -18 292 1 347 183 0 0 chr17 64837754 64837814 -20600666 - MIR SINE MIR -119 143 84 857 340 45 10 chr17 64837848 64838266 -20600214 + L2 LINE L2 2325 2757 -557 214 26 79 0 chr17 64838274 64838312 -20600168 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 2345 96 0 0 chr17 64838314 64838606 -20599874 - AluSx SINE Alu -20 292 1 201 288 88 38 chr17 64838718 64838798 -20599682 + L2 LINE L2 3144 3227 -45 1746 152 35 7 chr17 64838882 64839165 -20599315 + AluJo SINE Alu 1 291 -21 1961 117 62 3 chr17 64839178 64839468 -20599012 - AluSx SINE Alu -5 307 1 920 142 62 0 chr17 64839494 64839656 -20598824 - L1MB7 LINE L1 -19 6165 5994 1329 216 151 51 chr17 64839665 64840114 -20598366 + MLT1E2 LTR MaLR 133 626 0 219 69 0 0 chr17 64840180 64840209 -20598271 + (TTC)n Simple_repeat Simple_repeat 1 29 0 1914 121 0 38 chr17 64840209 64840498 -20597982 - AluSx SINE Alu -34 278 1 2308 181 6 3 chr17 64840735 64841099 -20597381 + MLT1A1 LTR MaLR 1 365 0 469 215 81 20 chr17 64841541 64841690 -20596790 + L1MB7 LINE L1 4256 4413 -1733 * 4364 170 18 33 chr17 64841679 64842521 -20595959 + L1MB7 LINE L1 5355 6183 -1 418 260 57 57 chr17 64843985 64844076 -20594404 - L1MC4a LINE L1 -1884 5924 5834 1716 166 3 28 chr17 64844076 64844396 -20594084 - AluJo SINE Alu 0 318 6 2406 85 0 10 chr17 64844404 64844711 -20593769 - AluSg SINE Alu -6 304 1 418 260 57 57 chr17 64844711 64844909 -20593571 - L1MC4a LINE L1 -1980 5828 5625 849 168 79 79 chr17 64844948 64845228 -20593252 - L1MC4 LINE L1 0 8042 7763 268 213 215 0 chr17 64845234 64845345 -20593135 - L1MC4a LINE L1 -1245 6563 6444 228 67 0 0 chr17 64845509 64845539 -20592941 + (TA)n Simple_repeat Simple_repeat 2 31 0 1347 125 48 10 chr17 64845539 64845747 -20592733 - AluJb SINE Alu -4 308 93 2219 113 3 0 chr17 64846028 64846321 -20592159 + AluSx SINE Alu 2 295 -17 546 241 21 11 chr17 64846348 64846539 -20591941 - L1M4 LINE L1 -1488 4658 4466 296 269 47 35 chr17 64846747 64846918 -20591562 - L1ME LINE L1 -295 5826 5654 2272 129 0 3 chr17 64846948 64847259 -20591221 - AluSx SINE Alu 0 312 3 2070 81 0 0 chr17 64847276 64847534 -20590946 - AluSg SINE Alu -18 292 35 2196 102 3 0 chr17 64847536 64847831 -20590649 - AluSp SINE Alu -17 296 1 1994 171 39 31 chr17 64848024 64848567 -20589913 + MLT2A2 LTR ERVL 1 554 0 1697 120 53 83 chr17 64849061 64849264 -20589216 + AluSx SINE Alu 1 194 -118 2153 98 0 3 chr17 64849264 64849550 -20588930 + AluSg SINE Alu 13 297 -13 1697 120 53 83 chr17 64849550 64849647 -20588833 + AluSx SINE Alu 194 292 -20 2274 107 0 7 chr17 64850055 64850355 -20588125 - AluSg SINE Alu -12 298 1 1131 118 0 12 chr17 64850525 64850694 -20587786 - AluSg/x SINE Alu -2 310 144 21 0 0 0 chr17 64850694 64850715 -20587765 + AT_rich Low_complexity Low_complexity 1 21 0 1277 253 100 75 chr17 64851394 64851588 -20586892 + Tigger8 DNA MER2_type 2 190 -476 1847 155 40 0 chr17 64851588 64851885 -20586595 - AluJb SINE Alu -2 310 2 1277 253 100 75 chr17 64851885 64852190 -20586290 + Tigger8 DNA MER2_type 190 523 -143 2164 119 7 10 chr17 64852190 64852500 -20585980 + AluSq SINE Alu 1 309 -4 1277 253 100 75 chr17 64852500 64852640 -20585840 + Tigger8 DNA MER2_type 523 658 -8 225 350 126 51 chr17 64853046 64853578 -20584902 - L2 LINE L2 -403 2911 2340 230 214 129 14 chr17 64853717 64853787 -20584693 + MLT1K LTR MaLR 188 265 -323 847 181 20 0 chr17 64854713 64854862 -20583618 - FRAM SINE Alu -14 162 11 508 277 97 20 chr17 64854955 64855150 -20583330 + MIR SINE MIR 45 254 -8 1752 166 3 7 chr17 64855237 64855618 -20582862 + AluJo SINE Alu 1 380 0 2079 142 0 13 chr17 64856474 64856790 -20581690 + AluSx SINE Alu 1 312 0 568 321 69 18 chr17 64857135 64857353 -20581127 - MIR SINE MIR -1 261 33 492 217 140 0 chr17 64857409 64857552 -20580928 - L1ME3 LINE L1 -47 6115 5953 21 118 0 0 chr17 64858910 64859029 -20579451 + GC_rich Low_complexity Low_complexity 1 119 0 331 315 104 72 chr17 64859166 64859655 -20578825 - L1M2 LINE L1 -5905 944 440 229 238 16 0 chr17 64860682 64860745 -20577735 + (TA)n Simple_repeat Simple_repeat 1 64 0 1147 188 71 5 chr17 64861611 64861835 -20576645 + MER8 DNA MER2_type 1 239 0 692 246 106 8 chr17 64861844 64862080 -20576400 - MIR SINE MIR -2 260 2 180 0 0 0 chr17 64862383 64862403 -20576077 + (TG)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 64862972 64862995 -20575485 + AT_rich Low_complexity Low_complexity 1 23 0 1826 181 0 3 chr17 64864022 64864321 -20574159 - AluJo SINE Alu -14 298 1 1852 142 63 3 chr17 64864340 64864658 -20573822 + MER1B DNA MER1_type 1 337 0 21 36 0 0 chr17 64864857 64864885 -20573595 + AT_rich Low_complexity Low_complexity 1 28 0 499 327 76 56 chr17 64865282 64865721 -20572759 + L2 LINE L2 2686 3133 -139 2012 146 0 10 chr17 64865721 64866022 -20572458 - AluSx SINE Alu -14 298 1 499 327 76 56 chr17 64866022 64866159 -20572321 + L2 LINE L2 3133 3266 -6 191 264 0 38 chr17 64866405 64866417 -20572063 + L2 LINE L2 3214 3225 -47 1510 217 39 12 chr17 64866417 64866749 -20571731 + MER58B DNA MER1_type 1 341 0 191 264 0 38 chr17 64866749 64866789 -20571691 + L2 LINE L2 3225 3264 -8 30 0 0 0 chr17 64868234 64868264 -20570216 + AT_rich Low_complexity Low_complexity 1 30 0 259 282 12 35 chr17 64868462 64868547 -20569933 + MIR SINE MIR 157 239 -23 4368 60 10 5 chr17 64869270 64869851 -20568629 + LTR10C LTR ERV1 1 584 -7 402 291 50 7 chr17 64870545 64870828 -20567652 - L1ME4a LINE L1 -188 5933 5709 383 300 67 0 chr17 64870837 64871017 -20567463 + L1M4 LINE L1 3711 3902 -2244 299 274 59 15 chr17 64871683 64871818 -20566662 - L1MEc LINE L1 -4740 1656 1516 313 325 179 0 chr17 64871842 64871993 -20566487 + L2 LINE L2 50 227 -3087 27 29 0 0 chr17 64872197 64872231 -20566249 + AT_rich Low_complexity Low_complexity 1 34 0 1678 140 11 21 chr17 64872318 64872604 -20565876 + AluJb SINE Alu 1 283 -29 189 107 0 0 chr17 64872604 64872632 -20565848 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 1759 306 205 22 chr17 64872644 64873037 -20565443 + L2 LINE L2 151 471 -2843 1100 162 97 9 chr17 64873037 64873253 -20565227 + MER46A DNA MER2_type 2 236 0 1759 306 205 22 chr17 64873253 64874105 -20564375 + L2 LINE L2 471 1623 -1691 454 263 178 13 chr17 64874123 64874275 -20564205 + L2 LINE L2 426 602 -2712 619 306 77 66 chr17 64874302 64874861 -20563619 - MER21B LTR ERV1 -157 706 142 282 240 173 10 chr17 64874892 64874996 -20563484 - MER77 LTR ERV1 -408 197 77 1421 230 32 3 chr17 64875072 64875385 -20563095 + L2 LINE L2 647 968 -2346 9646 172 36 30 chr17 64875386 64877754 -20560726 - L1 LINE L1 -1222 5566 3184 7766 191 30 25 chr17 64877753 64880573 -20557907 - L1 LINE L1 -4270 2519 7 * 1994 134 0 33 chr17 64880823 64881128 -20557352 - AluSx SINE Alu -17 295 1 2252 91 3 26 chr17 64882458 64882767 -20555713 - AluSg SINE Alu -8 302 1 1543 177 18 28 chr17 64882987 64883270 -20555210 - AluJo SINE Alu -28 284 5 376 329 186 34 chr17 64883277 64883869 -20554611 - L2 LINE L2 -1604 1710 1029 2419 70 0 6 chr17 64884047 64884360 -20554120 + AluY SINE Alu 1 311 0 242 102 85 0 chr17 64884385 64884444 -20554036 - MER2 DNA MER2_type -139 206 143 861 166 18 12 chr17 64884701 64884870 -20553610 - MER2 DNA MER2_type -134 211 42 2006 194 70 34 chr17 64885478 64885951 -20552529 - MLT1D LTR MaLR -3 502 13 2246 176 44 38 chr17 64885962 64886335 -20552145 - L1M4 LINE L1 -1437 4709 4329 1671 177 24 14 chr17 64886335 64886629 -20551851 + AluJo SINE Alu 1 297 -15 2246 176 44 38 chr17 64886629 64886863 -20551617 - L1M4 LINE L1 -1817 4329 4098 1424 108 0 78 chr17 64886868 64887099 -20551381 - AluSg/x SINE Alu -16 296 84 937 218 33 26 chr17 64887112 64887383 -20551097 - L1M4 LINE L1 -2063 4083 3811 2150 162 16 5 chr17 64887385 64887823 -20550657 - Looper DNA T2_type -781 777 335 533 229 16 25 chr17 64888492 64888614 -20549866 + FRAM SINE Alu 1 112 -64 2958 102 26 2 chr17 64888905 64889327 -20549153 + MER57B LTR ERV1 1 432 -2 2340 109 0 3 chr17 64889492 64889805 -20548675 - AluSq SINE Alu -1 312 1 839 158 0 85 chr17 64889807 64889984 -20548496 - FRAM SINE Alu -6 170 9 3673 219 59 16 chr17 64890625 64891701 -20546779 + L1PA15-16 LINE L1 1852 3065 -3784 1918 182 76 25 chr17 64891701 64892108 -20546372 + MSTA LTR MaLR 1 428 0 3673 219 59 16 chr17 64892108 64892259 -20546221 + L1PA15-16 LINE L1 3065 3208 -3641 971 123 37 6 chr17 64892264 64892427 -20546053 - MER30 DNA MER1_type -61 169 2 2879 142 38 6 chr17 64892433 64892933 -20545547 + L1PA15 LINE L1 5647 6162 -3 207 245 82 0 chr17 64894120 64894169 -20544311 - L2 LINE L2 0 3313 3261 1839 148 26 10 chr17 64894194 64894536 -20543944 - AluSx SINE Alu 0 349 3 478 310 80 16 chr17 64894599 64894786 -20543694 - L2 LINE L2 0 3313 3115 435 258 23 118 chr17 64894797 64895018 -20543462 - LTR16A1 LTR ERVL -177 280 81 2391 244 78 17 chr17 64895271 64896032 -20542448 - L1ME2 LINE L1 -91 6142 5336 330 141 153 59 chr17 64896032 64896117 -20542363 - Tigger7 DNA MER2_type 0 2491 2399 1388 189 64 0 chr17 64896126 64896375 -20542105 - Tigger7 DNA MER2_type -468 265 1 438 244 97 11 chr17 64896375 64896551 -20541929 - L1ME2 LINE L1 -878 5337 5147 186 103 0 0 chr17 64897283 64897312 -20541168 + (A)n Simple_repeat Simple_repeat 1 29 0 1183 231 82 74 chr17 64897771 64898355 -20540125 - L1ME2 LINE L1 -1107 5108 4520 * 2789 235 98 49 chr17 64898353 64898587 -20539893 - L1ME2 LINE L1 -2398 3817 3596 450 0 0 0 chr17 64898587 64898637 -20539843 + (TG)n Simple_repeat Simple_repeat 1 50 0 2789 235 98 49 chr17 64898637 64899634 -20538846 - L1ME2 LINE L1 -2619 3596 2504 1711 178 0 11 chr17 64899634 64899921 -20538559 + AluJo SINE Alu 1 284 -28 2789 235 98 49 chr17 64899921 64900116 -20538364 - L1ME2 LINE L1 -3711 2504 2320 453 286 194 32 chr17 64900130 64901143 -20537337 - L1ME2 LINE L1 -4135 2261 1085 612 318 39 25 chr17 64901143 64901429 -20537051 - L2 LINE L2 -1506 1808 1519 1331 140 39 19 chr17 64901968 64902225 -20536255 - L1MA1 LINE L1 0 6302 6041 408 187 43 36 chr17 64902911 64903050 -20535430 - L1M4 LINE L1 -3166 3478 3339 2768 246 69 35 chr17 64903097 64903905 -20534575 - MER21B LTR ERV1 -15 848 13 1342 295 80 13 chr17 64903952 64904549 -20533931 - L1M4 LINE L1 -3313 3331 2695 315 292 72 72 chr17 64904589 64904708 -20533772 - L1M4 LINE L1 -4068 2576 2515 1847 169 0 13 chr17 64904708 64905009 -20533471 - AluJb SINE Alu -13 299 3 315 292 72 72 chr17 64905009 64905178 -20533302 - L1M4 LINE L1 -4129 2515 2348 1516 210 10 19 chr17 64905335 64905645 -20532835 - AluJo SINE Alu -5 307 1 285 70 0 0 chr17 64905699 64905742 -20532738 - L1M4 LINE L1 -4728 2097 2055 802 234 0 6 chr17 64905746 64905917 -20532563 - FAM SINE Alu -5 44 1 2592 229 52 55 chr17 64905934 64906169 -20532311 - L1M4 LINE L1 -4632 2012 1778 2089 146 0 3 chr17 64906169 64906478 -20532002 + AluSx SINE Alu 1 308 -4 2592 229 52 55 chr17 64906478 64907341 -20531139 - L1M4 LINE L1 -4866 1778 840 24 53 0 0 chr17 64907976 64908014 -20530466 + AT_rich Low_complexity Low_complexity 1 38 0 2091 55 11 4 chr17 64908014 64908289 -20530191 - L1PA5 LINE L1 -3 6151 5875 23 54 0 0 chr17 64908509 64908546 -20529934 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr17 64908561 64908582 -20529898 + AT_rich Low_complexity Low_complexity 1 21 0 854 138 0 0 chr17 64908985 64909108 -20529372 + AluSg SINE Alu 1 123 -187 2298 182 56 2 chr17 64909112 64909910 -20528570 - L1M3 LINE L1 -363 5817 4863 24 32 0 0 chr17 64910015 64910046 -20528434 + AT_rich Low_complexity Low_complexity 1 31 0 1396 176 68 18 chr17 64910550 64910829 -20527651 + AluJo SINE Alu 1 293 -19 4316 167 50 50 chr17 64910839 64910899 -20527581 - L1MD1 LINE L1 0 6242 6183 1864 130 36 10 chr17 64910899 64911200 -20527280 + AluSg SINE Alu 1 309 -1 4316 167 50 50 chr17 64911200 64911902 -20526578 - L1MD1 LINE L1 -59 6183 5482 189 0 0 0 chr17 64911902 64911923 -20526557 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1835 156 0 0 chr17 64911926 64912208 -20526272 - AluSx SINE Alu -30 282 1 4316 167 50 50 chr17 64912208 64912268 -20526212 - L1MD1 LINE L1 -762 5480 5421 599 215 7 0 chr17 64912268 64912403 -20526077 - L1PB4 LINE L1 0 6156 6021 4316 167 50 50 chr17 64912403 64912605 -20525875 - L1MD1 LINE L1 -821 5421 5212 1994 101 4 4 chr17 64912605 64912909 -20525571 - AluSq SINE Alu 0 313 10 4316 167 50 50 chr17 64912909 64912982 -20525498 - L1MD1 LINE L1 -1030 5212 5140 1313 159 13 18 chr17 64912982 64913208 -20525272 - AluJo SINE Alu 0 312 88 592 68 0 0 chr17 64913481 64913554 -20524926 - MSTB LTR MaLR -353 73 1 1293 218 62 39 chr17 64913703 64914088 -20524392 + MSTD LTR MaLR 3 396 0 4361 220 72 108 chr17 64914088 64914494 -20523986 + MSTD-int LTR MaLR 2 421 -1314 2164 100 0 10 chr17 64914494 64914793 -20523687 + AluSg1 SINE Alu 1 296 -13 4361 220 72 108 chr17 64914793 64915786 -20522694 + MSTD-int LTR MaLR 421 1449 -286 219 69 0 0 chr17 64915786 64915815 -20522665 + (TG)n Simple_repeat Simple_repeat 2 30 0 660 229 0 0 chr17 64915816 64915938 -20522542 - FLAM_A SINE Alu -9 124 3 4361 220 72 108 chr17 64915938 64916128 -20522352 + MSTD-int LTR MaLR 1448 1536 -199 3702 99 9 0 chr17 64916552 64917076 -20521404 - MER41A LTR ERV1 0 554 26 206 250 17 50 chr17 64917179 64917239 -20521241 - MIR SINE MIR -149 113 56 1980 139 0 0 chr17 64917952 64918306 -20520174 + AluJb SINE Alu 4 357 0 768 292 171 27 chr17 64918353 64918792 -20519688 + L2 LINE L2 2811 3312 -1 24 0 0 0 chr17 64920617 64920641 -20517839 + AT_rich Low_complexity Low_complexity 1 24 0 2360 183 99 0 chr17 64920720 64921213 -20517267 - MER34 LTR ERV1 0 542 1 21 95 0 0 chr17 64921359 64921422 -20517058 + AT_rich Low_complexity Low_complexity 1 63 0 21 0 0 0 chr17 64921721 64921742 -20516738 + AT_rich Low_complexity Low_complexity 1 21 0 335 379 88 29 chr17 64922083 64922534 -20515946 - L2 LINE L2 0 3272 2722 1163 294 114 39 chr17 64922674 64923245 -20515235 - MLT1L LTR MaLR 0 615 2 393 344 56 19 chr17 64924273 64924488 -20513992 - L2 LINE L2 -173 3099 2877 243 205 64 64 chr17 64924925 64925003 -20513477 - L2 LINE L2 -684 2630 2553 1946 240 37 31 chr17 64925219 64925735 -20512745 - MER21B LTR ERV1 -326 537 19 291 222 12 74 chr17 64925780 64925861 -20512619 - MER21B LTR ERV1 -787 76 1 247 309 99 0 chr17 64925956 64926118 -20512362 - L2 LINE L2 -933 2381 2204 372 285 81 35 chr17 64926130 64926302 -20512178 - L1ME1 LINE L1 -25 6141 5962 6858 110 21 11 chr17 64926302 64927703 -20510777 + Tigger1 DNA MER2_type 945 2418 0 2752 219 81 14 chr17 64927720 64929110 -20509370 - L1ME1 LINE L1 -280 5886 4398 1446 164 27 41 chr17 64929125 64929489 -20508991 - Tigger7 DNA MER2_type 0 2487 196 1245 164 64 5 chr17 64929488 64929708 -20508772 - Tigger7 DNA MER2_type -2246 241 9 * 2173 111 3 0 chr17 64929781 64930078 -20508402 + AluSx SINE Alu 1 298 -14 2714 238 34 33 chr17 64930088 64930992 -20507488 - L1ME1 LINE L1 -1823 4323 3419 315 317 14 49 chr17 64931023 64931165 -20507315 + MIR3 SINE MIR 58 194 -14 261 328 43 43 chr17 64935442 64935558 -20502922 + L2 LINE L2 3139 3254 -18 275 274 0 0 chr17 64935598 64935671 -20502809 + (CATA)n Simple_repeat Simple_repeat 4 76 0 628 240 47 27 chr17 64935677 64935827 -20502653 - MIR SINE MIR -70 192 40 617 264 72 84 chr17 64936693 64937217 -20501263 - L1MC/D LINE L1 -743 5403 5303 1375 206 72 19 chr17 64937217 64937538 -20500942 + MER58B DNA MER1_type 4 341 0 617 264 72 84 chr17 64937538 64938030 -20500450 - L1MC/D LINE L1 -843 5303 4806 29 0 0 0 chr17 64938041 64938070 -20500410 + AT_rich Low_complexity Low_complexity 1 29 0 741 178 0 8 chr17 64938071 64938189 -20500291 - FLAM_A SINE Alu -16 117 1 1272 93 0 0 chr17 64938413 64938574 -20499906 - AluSg/x SINE Alu -16 294 134 2230 78 44 0 chr17 64938575 64938869 -20499611 - AluSq SINE Alu -6 307 1 354 258 65 54 chr17 64939630 64939890 -20498590 - L2 LINE L2 -770 2544 2282 1164 211 39 91 chr17 64939961 64940511 -20497969 - MER39 LTR ERV1 0 707 1 1281 153 0 0 chr17 64940690 64940906 -20497574 - L1P LINE L1 -1131 5015 4800 1865 128 3 13 chr17 64940906 64941209 -20497271 + L1PA13 LINE L1 5852 6154 -9 3640 256 89 20 chr17 64941387 64942319 -20496161 - L2 LINE L2 0 3313 2245 1482 166 45 60 chr17 64942319 64942633 -20495847 + AluJb SINE Alu 1 309 -3 3640 256 89 20 chr17 64942633 64943139 -20495341 - L2 LINE L2 -1068 2245 1775 297 333 42 82 chr17 64943249 64943601 -20494879 + L2 LINE L2 2633 2969 -303 240 79 0 0 chr17 64943821 64943858 -20494622 + Tigger7 DNA MER2_type 2450 2486 -101 1828 173 14 48 chr17 64943858 64944229 -20494251 + MER47A DNA MER2_type 2 359 -7 407 308 88 19 chr17 64944414 64944622 -20493858 - MIR SINE MIR -14 248 26 286 156 0 0 chr17 64944830 64944875 -20493605 - MER58 DNA MER1_type -1 2419 2375 1030 226 83 0 chr17 64945017 64945269 -20493211 - MER58 DNA MER1_type -2147 273 1 270 306 104 31 chr17 64945269 64945460 -20493020 - MLT1L LTR MaLR -54 561 357 1525 263 184 38 chr17 64945512 64946251 -20492229 + L2 LINE L2 1818 2664 -650 468 308 112 0 chr17 64946276 64946445 -20492035 + MIR SINE MIR 20 207 -55 2178 97 0 36 chr17 64946622 64946930 -20491550 - AluSc SINE Alu -12 297 1 27 29 0 0 chr17 64947594 64947628 -20490852 + AT_rich Low_complexity Low_complexity 1 34 0 1362 179 57 47 chr17 64948112 64948240 -20490240 + AluJb SINE Alu 1 126 -186 306 0 0 0 chr17 64948240 64948274 -20490206 + (TA)n Simple_repeat Simple_repeat 2 35 0 1362 179 57 47 chr17 64948274 64948441 -20490039 + AluJb SINE Alu 126 299 -13 24 0 0 0 chr17 64948469 64948493 -20489987 + AT_rich Low_complexity Low_complexity 1 24 0 1685 170 14 17 chr17 64948646 64948940 -20489540 + AluJo SINE Alu 2 294 -18 732 163 0 64 chr17 64949234 64949375 -20489105 - FLAM_A SINE Alu 0 133 2 5314 123 17 26 chr17 64949667 64951369 -20487111 - L1PA13 LINE L1 0 6163 4474 22 35 0 0 chr17 64951369 64951398 -20487082 + AT_rich Low_complexity Low_complexity 1 29 0 296 286 67 0 chr17 64951416 64951521 -20486959 - L1MC5 LINE L1 -516 7445 7334 * 918 266 94 21 chr17 64951507 64951931 -20486549 - L1MC5 LINE L1 -539 7422 6968 896 293 116 26 chr17 64951977 64952356 -20486124 - L1MC4a LINE L1 -917 6891 6479 2235 92 3 0 chr17 64952588 64952880 -20485600 + AluSq SINE Alu 1 293 -20 361 310 147 16 chr17 64952890 64953148 -20485332 - HAL1b LINE L1 -613 735 444 512 187 8 65 chr17 64953187 64953310 -20485170 + FLAM_A SINE Alu 12 127 -15 2402 89 0 0 chr17 64953334 64953647 -20484833 + AluSq SINE Alu 1 313 0 239 237 11 0 chr17 64953812 64953905 -20484575 + (TA)n Simple_repeat Simple_repeat 2 95 0 339 296 64 16 chr17 64953944 64954069 -20484411 - HAL1b LINE L1 -1157 191 61 3019 216 99 14 chr17 64955036 64955781 -20482699 - MER21B LTR ERV1 -28 835 22 396 0 0 0 chr17 64955781 64955825 -20482655 + (TG)n Simple_repeat Simple_repeat 2 45 0 3019 216 99 14 chr17 64955825 64955849 -20482631 - MER21B LTR ERV1 -841 22 1 225 0 0 0 chr17 64955924 64955949 -20482531 + (TG)n Simple_repeat Simple_repeat 2 26 0 1643 185 6 19 chr17 64956422 64956735 -20481745 + AluJo SINE Alu 1 309 -3 5095 155 31 30 chr17 64956995 64958135 -20480345 - L1MA9 LINE L1 -12 6300 5163 704 92 0 149 chr17 64958136 64958277 -20480203 - AluJb SINE Alu -8 304 185 562 239 95 61 chr17 64958296 64958706 -20479774 - L1M3e LINE L1 -5310 1720 1297 592 140 22 164 chr17 64959395 64959591 -20478889 + L1ME LINE L1 1062 1227 -5310 37 0 0 0 chr17 64959726 64959763 -20478717 + AT_rich Low_complexity Low_complexity 1 37 0 2112 229 57 27 chr17 64959780 64960410 -20478070 + L1ME LINE L1 1193 1841 -4699 532 285 103 50 chr17 64960403 64960859 -20477621 + L1ME LINE L1 5719 6198 -358 * 27 81 0 0 chr17 64961397 64961459 -20477021 + AT_rich Low_complexity Low_complexity 1 62 0 808 212 127 5 chr17 64961490 64961679 -20476801 - MER20 DNA MER1_type -5 214 3 439 264 153 21 chr17 64961695 64961871 -20476609 - MIR SINE MIR -50 212 14 908 216 21 0 chr17 64962841 64963031 -20475449 + MER58 DNA MER1_type 21 214 -127 646 244 6 49 chr17 64963541 64963705 -20474775 - FRAM SINE Alu -9 157 1 254 317 232 6 chr17 64964154 64964318 -20474162 + MIR SINE MIR 36 236 -26 561 198 136 34 chr17 64966845 64967022 -20471458 + L2 LINE L2 3117 3311 -2 1790 107 53 29 chr17 64967787 64968068 -20470412 - AluSx SINE Alu -24 288 1 3063 277 139 32 chr17 64968254 64969717 -20468763 + HAL1 LINE L1 203 1822 -685 644 260 67 5 chr17 64969721 64969944 -20468536 + HAL1 LINE L1 1851 2087 -420 1046 245 20 37 chr17 64970130 64970481 -20467999 - L1M4 LINE L1 -2368 3778 3434 2709 238 55 1 chr17 64970486 64971283 -20467197 - L1M4 LINE L1 -2812 3334 2495 192 176 66 99 chr17 64972294 64972385 -20466095 + L2 LINE L2 3137 3224 -89 212 205 167 26 chr17 64973105 64973183 -20465297 - MIR SINE MIR -30 232 144 23 0 0 0 chr17 64973189 64973212 -20465268 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr17 64973418 64973455 -20465025 + AT_rich Low_complexity Low_complexity 1 37 0 2311 63 0 23 chr17 64974132 64974431 -20464049 + AluY SINE Alu 1 292 -19 416 260 33 13 chr17 64974694 64974844 -20463636 + L1MEd LINE L1 12 164 -5955 1505 247 104 39 chr17 64974923 64975462 -20463018 - ERVL LTR ERVL -1499 4265 3692 358 320 66 28 chr17 64975737 64975918 -20462562 - L1MDa LINE L1 -6210 330 143 5129 243 28 16 chr17 64975943 64977462 -20461018 - L1MCb LINE L1 -2203 4223 2688 5851 138 158 34 chr17 64977468 64978900 -20459580 - L1MCb LINE L1 -3906 2520 911 260 231 0 0 chr17 64978934 64978986 -20459494 + LTR30 LTR ERV1 1 52 -670 1333 114 116 15 chr17 64978999 64979236 -20459244 + LTR12 LTR ERV1 55 2032 -406 284 245 75 0 chr17 64979236 64979330 -20459150 + LTR30 LTR ERV1 552 652 -70 456 121 181 0 chr17 64979330 64979413 -20459067 + LTR12 LTR ERV1 484 581 -133 3430 199 76 43 chr17 64979419 64980257 -20458223 - L1MCb LINE L1 -5538 888 23 297 229 36 36 chr17 64980267 64980350 -20458130 - L1MDa LINE L1 -5982 548 21 228 254 51 0 chr17 64981315 64981374 -20457106 + L1M4 LINE L1 4089 4150 -1996 216 314 32 0 chr17 64981684 64981808 -20456672 - L2 LINE L2 -421 2893 2766 23 0 0 0 chr17 64981863 64981886 -20456594 + AT_rich Low_complexity Low_complexity 1 23 0 3229 220 64 43 chr17 64982196 64982465 -20456015 - L1ME1 LINE L1 -17 6149 5887 8515 43 0 3 chr17 64982465 64984285 -20454195 - L1PA5 LINE L1 -3 6151 4330 3229 220 64 43 chr17 64984285 64984718 -20453762 - L1ME1 LINE L1 -279 5887 5465 2127 144 77 17 chr17 64984718 64985122 -20453358 - MSTA LTR MaLR 0 428 1 3229 220 64 43 chr17 64985122 64986029 -20452451 - L1ME1 LINE L1 -701 5465 4493 744 191 0 22 chr17 64986029 64986165 -20452315 - FLAM_A SINE Alu 0 133 1 3229 220 64 43 chr17 64986165 64986455 -20452025 - L1ME1 LINE L1 -1673 4493 4211 304 238 36 0 chr17 64986692 64986776 -20451704 - L1ME3A LINE L1 -4 6166 6080 1637 185 17 17 chr17 64987418 64987720 -20450760 - AluJo SINE Alu -10 302 1 313 330 55 0 chr17 64988408 64988517 -20449963 + HAL1 LINE L1 1162 1276 -1231 2703 162 55 86 chr17 64988705 64989288 -20449192 - L1MB4 LINE L1 -228 5952 5352 1782 185 0 19 chr17 64989288 64989596 -20448884 - AluJb SINE Alu -10 302 1 2703 162 55 86 chr17 64989596 64989661 -20448819 - L1MB4 LINE L1 -828 5352 5287 335 61 0 20 chr17 64989661 64989710 -20448770 - MADE1 DNA Mariner -32 48 1 1281 97 83 23 chr17 64989715 64989932 -20448548 + MER30 DNA MER1_type 1 230 0 2703 162 55 86 chr17 64989932 64990104 -20448376 - L1MB4 LINE L1 -897 5283 5089 233 276 103 9 chr17 64990108 64990224 -20448256 - L1MEd LINE L1 -5053 1066 940 319 340 111 21 chr17 64990256 64990535 -20447945 - L1MEd LINE L1 -5269 850 547 465 19 0 0 chr17 64990681 64990735 -20447745 + (CA)n Simple_repeat Simple_repeat 2 55 0 234 0 0 0 chr17 64990734 64990760 -20447720 + (TC)n Simple_repeat Simple_repeat 2 27 0 * 240 100 0 0 chr17 64990765 64990805 -20447675 + (TA)n Simple_repeat Simple_repeat 1 40 0 27 49 0 0 chr17 64992022 64992063 -20446417 + AT_rich Low_complexity Low_complexity 1 41 0 1205 303 44 27 chr17 64993793 64994269 -20444211 - L2 LINE L2 0 3313 2830 1419 179 9 50 chr17 64994272 64994590 -20443890 + AluJo SINE Alu 5 309 -3 226 250 0 0 chr17 64994664 64994720 -20443760 + T-rich Low_complexity Low_complexity 1 56 0 1240 73 0 0 chr17 64994721 64994886 -20443594 - L1PA5 LINE L1 0 6154 5990 275 221 63 63 chr17 64994890 64994985 -20443495 + L1PA5 LINE L1 5952 6046 -108 1478 166 113 3 chr17 64995064 64995348 -20443132 - MER2 DNA MER2_type -25 320 6 323 195 12 37 chr17 64995775 64995857 -20442623 + MIR SINE MIR 99 178 -84 267 186 47 155 chr17 64996119 64996248 -20442232 - MIR SINE MIR -114 148 34 181 369 77 0 chr17 64996255 64996320 -20442160 - MIR SINE MIR -118 144 75 518 291 58 14 chr17 64996666 64996889 -20441591 + L1MC/D LINE L1 5526 5758 -2050 811 271 10 15 chr17 64997078 64997277 -20441203 + MIR SINE MIR 65 262 0 1467 166 140 34 chr17 64998564 64998913 -20439567 - MER31B LTR ERV1 -80 386 1 303 328 64 6 chr17 64999462 64999633 -20438847 + L1M4 LINE L1 2177 2357 -3789 2193 165 50 24 chr17 64999736 65000197 -20438283 + L1MB8 LINE L1 5647 6119 -59 890 62 78 0 chr17 65000287 65000415 -20438065 + MER85 DNA T2_type 1 138 -1 836 159 49 0 chr17 65000503 65000666 -20437814 + L1MA4 LINE L1 6118 6288 -12 2187 111 3 0 chr17 65000779 65001085 -20437395 + AluSc SINE Alu 1 307 -2 23 54 0 0 chr17 65001215 65001252 -20437228 + AT_rich Low_complexity Low_complexity 1 37 0 307 312 118 58 chr17 65001378 65001846 -20436634 + L1M4 LINE L1 3078 3573 -2573 292 304 22 0 chr17 65001872 65001964 -20436516 - MIR SINE MIR -10 252 159 * 685 351 30 11 chr17 65001940 65002205 -20436275 - L3 LINE CR1 -78 1499 1230 242 368 15 8 chr17 65002214 65002347 -20436133 - L3 LINE CR1 -1111 466 333 934 218 53 115 chr17 65002654 65003053 -20435427 - MLT1A2 LTR MaLR 0 374 1 465 298 55 17 chr17 65003095 65003276 -20435204 + MIR SINE MIR 8 195 -67 1680 131 63 11 chr17 65003280 65003548 -20434932 + AluSx SINE Alu 1 282 -30 2423 79 0 0 chr17 65003968 65004273 -20434207 - AluSc SINE Alu -4 305 1 233 261 43 14 chr17 65004847 65004916 -20433564 + MIR SINE MIR 84 154 -108 1823 160 3 10 chr17 65005763 65006057 -20432423 - AluJo SINE Alu -20 292 1 243 309 80 19 chr17 65007989 65008151 -20430329 - MIR SINE MIR -46 216 45 1354 170 53 53 chr17 65010885 65011026 -20427454 - AluJb SINE Alu -28 284 144 2367 66 3 13 chr17 65011026 65011331 -20427149 - AluY SINE Alu -9 302 1 1354 170 53 53 chr17 65011331 65011471 -20427009 - AluJb SINE Alu -167 145 3 23 33 0 0 chr17 65011834 65011864 -20426616 + AT_rich Low_complexity Low_complexity 1 30 0 1623 144 0 108 chr17 65011982 65012316 -20426164 + AluJb SINE Alu 1 298 -14 1897 162 10 3 chr17 65012783 65013091 -20425389 + AluJb SINE Alu 1 310 -2 328 335 106 6 chr17 65013496 65013657 -20424823 + MIR SINE MIR 66 242 -20 23 0 0 0 chr17 65013867 65013890 -20424590 + AT_rich Low_complexity Low_complexity 1 23 0 1008 135 0 47 chr17 65014046 65014216 -20424264 + AluJo SINE Alu 121 282 -30 368 173 53 0 chr17 65014439 65014514 -20423966 - MER103 DNA DNA -71 95 17 2031 134 20 3 chr17 65014704 65015002 -20423478 + AluSx SINE Alu 1 303 -9 2207 99 0 7 chr17 65015525 65015827 -20422653 + AluY SINE Alu 1 300 -11 2051 98 6 54 chr17 65015933 65016250 -20422230 - AluSg1 SINE Alu -7 302 1 2042 148 21 3 chr17 65016902 65017233 -20421247 + MER1B DNA MER1_type 1 337 0 830 209 96 0 chr17 65017383 65017570 -20420910 + MIR SINE MIR 52 256 -6 948 157 101 28 chr17 65018165 65018382 -20420098 + MIR SINE MIR 30 262 0 498 298 0 0 chr17 65018416 65018520 -20419960 + L2 LINE L2 3169 3272 0 1963 122 11 7 chr17 65018671 65018958 -20419522 - AluSx SINE Alu -24 288 1 1278 116 48 0 chr17 65020436 65020643 -20417837 + L1MA3 LINE L1 6089 6305 0 1188 155 112 36 chr17 65021267 65021545 -20416935 - AluJo SINE Alu -2 300 2 631 325 31 5 chr17 65021553 65021747 -20416733 + MIR SINE MIR 29 227 -35 903 92 0 69 chr17 65021748 65021879 -20416601 + AluSx SINE Alu 64 185 -127 2124 113 3 10 chr17 65022477 65022777 -20415703 + AluSx SINE Alu 1 298 -14 765 197 63 0 chr17 65023929 65024071 -20414409 - MER5A DNA MER1_type -31 158 8 2178 113 0 0 chr17 65025219 65025521 -20412959 - AluSg SINE Alu -8 302 1 1081 68 0 0 chr17 65025521 65025654 -20412826 - AluSg SINE Alu -177 133 1 228 259 111 28 chr17 65026569 65026677 -20411803 - MIR SINE MIR 0 262 146 189 362 14 0 chr17 65026913 65026982 -20411498 - MIR SINE MIR -109 153 84 1709 144 40 0 chr17 65027203 65027481 -20410999 + AluJo SINE Alu 12 300 -12 21 0 0 0 chr17 65027799 65027820 -20410660 + AT_rich Low_complexity Low_complexity 1 21 0 440 218 50 30 chr17 65028751 65028852 -20409628 - L2 LINE L2 -1 3312 3210 225 180 33 49 chr17 65028862 65028923 -20409557 + L1ME LINE L1 5393 5452 -669 544 298 120 60 chr17 65028964 65029531 -20408949 + L1MEc LINE L1 120 720 -5676 268 292 0 14 chr17 65029940 65030012 -20408468 - L2 LINE L2 -4 3309 3239 531 302 45 57 chr17 65030184 65030581 -20407899 + MLT1J2 LTR MaLR 1 442 -8 1357 176 90 8 chr17 65031594 65031849 -20406631 + AluSq SINE Alu 1 276 -37 1774 161 14 7 chr17 65031875 65032167 -20406313 + AluJo SINE Alu 3 296 -16 397 231 60 25 chr17 65032183 65032382 -20406098 + MER113 DNA MER1_type? 1 206 -315 415 185 219 8 chr17 65032410 65032529 -20405951 + MER113 DNA MER1_type? 276 419 -102 283 309 0 10 chr17 65032541 65032638 -20405842 - MLT1I LTR MaLR -3 406 311 280 277 101 17 chr17 65032770 65032889 -20405591 - MLT1J2 LTR MaLR -302 148 20 265 301 43 0 chr17 65032904 65032997 -20405483 + MER113 DNA MER1_type? 422 518 -3 1887 134 7 10 chr17 65032998 65033296 -20405184 - AluSq SINE Alu -13 300 4 306 360 109 0 chr17 65033331 65033478 -20405002 + MIR SINE MIR 32 194 -68 1871 122 3 78 chr17 65033509 65033830 -20404650 + AluSx SINE Alu 1 297 -15 1187 294 26 18 chr17 65034384 65034928 -20403552 - L1M4 LINE L1 -2530 3616 3069 852 168 0 0 chr17 65036121 65036252 -20402228 + FLAM_C SINE Alu 2 132 -1 226 246 0 0 chr17 65037095 65037152 -20401328 + T-rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr17 65037292 65037313 -20401167 + AT_rich Low_complexity Low_complexity 1 21 0 3700 198 44 21 chr17 65037755 65038649 -20399831 - L1 LINE L1 -1086 5060 4147 219 271 14 0 chr17 65038771 65038841 -20399639 + T-rich Low_complexity Low_complexity 4 74 0 258 32 0 0 chr17 65039223 65039254 -20399226 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1668 156 0 58 chr17 65039298 65039626 -20398854 + AluJb SINE Alu 1 309 -3 874 185 16 11 chr17 65039754 65039938 -20398542 - MER5A DNA MER1_type 0 189 5 491 298 145 26 chr17 65040207 65040435 -20398045 - MIR SINE MIR 0 262 8 377 293 131 35 chr17 65040568 65040789 -20397691 - MIR SINE MIR -26 236 1 184 179 18 89 chr17 65042500 65042556 -20395924 - L2 LINE L2 -12 3301 3250 348 232 0 0 chr17 65043408 65043507 -20394973 + CT-rich Low_complexity Low_complexity 2 100 0 887 196 50 11 chr17 65045703 65045882 -20392598 - MER5A DNA MER1_type 0 189 4 273 237 34 0 chr17 65046459 65046518 -20391962 - MIR SINE MIR -67 141 81 613 176 207 12 chr17 65046761 65046930 -20391550 + MIR SINE MIR 54 256 -6 261 193 0 0 chr17 65047290 65047347 -20391133 + L1ME4a LINE L1 5996 6052 -69 309 312 126 55 chr17 65047350 65047549 -20390931 + MIR SINE MIR 2 214 -48 1267 161 18 27 chr17 65049018 65049242 -20389238 - AluJo SINE Alu -86 226 5 1742 152 0 7 chr17 65049273 65049550 -20388930 - LTR48B LTR ERV1 -369 275 1 784 224 11 34 chr17 65049767 65049946 -20388534 + MIR SINE MIR 32 206 -56 202 107 0 89 chr17 65049946 65050002 -20388478 + (TAAAAA)n Simple_repeat Simple_repeat 6 56 0 778 215 6 0 chr17 65050004 65050162 -20388318 - AluJb SINE Alu -17 295 137 680 278 49 25 chr17 65050359 65050604 -20387876 + MIR SINE MIR 2 252 -10 2059 233 63 39 chr17 65050939 65051497 -20386983 - MLT1E LTR MaLR 0 593 23 292 250 24 0 chr17 65051676 65051760 -20386720 - L1ME4a LINE L1 -69 6052 5967 1224 204 93 28 chr17 65051765 65052088 -20386392 - MER2 DNA MER2_type 0 344 1 1466 179 45 92 chr17 65052099 65052480 -20386000 - MLT1A2 LTR MaLR -8 366 4 784 189 0 0 chr17 65052509 65052641 -20385839 + AluJo SINE Alu 3 134 -178 511 297 120 30 chr17 65052645 65053052 -20385428 - L1ME4a LINE L1 -193 5928 5485 1332 164 0 5 chr17 65053411 65053624 -20384856 + AluSg/x SINE Alu 84 295 -17 916 314 51 3 chr17 65053687 65054002 -20384478 + L2 LINE L2 1904 2233 -1081 246 244 61 24 chr17 65054125 65054207 -20384273 + L2 LINE L2 2994 3078 -235 * 3862 274 99 19 chr17 65054175 65054272 -20384208 - L2 LINE L2 -1374 1940 1852 1853 154 13 7 chr17 65054272 65054570 -20383910 + AluJo SINE Alu 1 300 -12 3862 274 99 19 chr17 65054570 65055800 -20382680 - L2 LINE L2 -1462 1852 507 251 358 42 33 chr17 65055887 65056007 -20382473 - L2 LINE L2 -4 3268 3148 987 178 0 24 chr17 65056379 65056548 -20381932 - FRAM SINE Alu -1 165 1 2874 166 46 8 chr17 65056737 65057236 -20381244 - MLT2B1 LTR ERVL 0 520 3 1811 129 34 17 chr17 65057249 65057543 -20380937 + AluJo SINE Alu 1 299 -13 210 37 0 0 chr17 65058559 65058586 -20379894 + (GA)n Simple_repeat Simple_repeat 2 28 0 602 224 103 0 chr17 65059410 65059566 -20378914 + MIR SINE MIR 79 250 -12 22 35 0 0 chr17 65059566 65059595 -20378885 + AT_rich Low_complexity Low_complexity 1 29 0 1268 119 0 0 chr17 65059988 65060164 -20378316 + AluSg/x SINE Alu 137 312 0 713 206 0 23 chr17 65060335 65060466 -20378014 + FLAM_C SINE Alu 1 128 -15 2018 110 40 0 chr17 65061794 65062087 -20376393 + AluSc SINE Alu 1 304 0 2064 77 42 38 chr17 65062102 65062389 -20376091 + AluY SINE Alu 4 291 -20 2297 79 3 32 chr17 65062395 65062710 -20375770 + AluY SINE Alu 1 306 -5 2390 84 10 0 chr17 65063323 65063632 -20374848 - AluSx SINE Alu 0 312 1 2146 99 40 7 chr17 65064429 65064731 -20373749 - AluSq SINE Alu -1 312 1 298 268 56 0 chr17 65064875 65064946 -20373534 + L2 LINE L2 3197 3271 -1 2442 205 107 0 chr17 65065488 65065985 -20372495 + MER89 LTR ERV1 1 550 -9 23 0 0 0 chr17 65066054 65066077 -20372403 + AT_rich Low_complexity Low_complexity 1 23 0 1036 228 111 8 chr17 65067045 65067414 -20371066 + L1ME1 LINE L1 4304 4710 -1436 2683 219 69 66 chr17 65067490 65067539 -20370941 + L1ME1 LINE L1 4946 4993 -1173 1553 169 0 26 chr17 65067539 65067805 -20370675 + AluJo SINE Alu 46 304 -8 2683 219 69 66 chr17 65067805 65068773 -20369707 + L1ME1 LINE L1 4993 5967 -199 2498 68 0 3 chr17 65068773 65069084 -20369396 + AluY SINE Alu 1 310 -1 2683 219 69 66 chr17 65069084 65069230 -20369250 + L1ME1 LINE L1 5967 6111 -55 2301 113 0 3 chr17 65069231 65069540 -20368940 + AluSx SINE Alu 1 308 -4 2434 53 0 7 chr17 65070299 65070600 -20367880 + AluY SINE Alu 1 299 -12 204 318 32 32 chr17 65071395 65071458 -20367022 + L2 LINE L2 3137 3199 -73 646 262 187 19 chr17 65071555 65071769 -20366711 + MIR SINE MIR 13 262 0 21 0 0 0 chr17 65071834 65071855 -20366625 + AT_rich Low_complexity Low_complexity 1 21 0 1351 164 87 31 chr17 65072117 65072403 -20366077 + AluJo SINE Alu 1 302 -10 190 371 67 30 chr17 65072450 65072717 -20365763 - L2 LINE L2 -1573 1741 1465 309 222 148 12 chr17 65072911 65072992 -20365488 - L2 LINE L2 -1 3312 3221 2292 107 3 0 chr17 65072992 65073301 -20365179 + AluSx SINE Alu 1 310 -2 640 206 0 29 chr17 65075779 65075915 -20362565 + L1PB4 LINE L1 6016 6147 -9 2503 44 7 0 chr17 65075985 65076281 -20362199 + AluY SINE Alu 1 298 -13 600 261 0 54 chr17 65076735 65076902 -20361578 - L1ME3 LINE L1 -98 6064 5908 1972 90 90 11 chr17 65076902 65077181 -20361299 - AluSx SINE Alu -11 301 1 600 261 0 54 chr17 65077181 65077216 -20361264 - L1ME3 LINE L1 -254 5908 5873 868 211 0 0 chr17 65077261 65077408 -20361072 - FRAM SINE Alu -19 147 1 1277 133 0 11 chr17 65077462 65077642 -20360838 - AluSx SINE Alu -134 178 1 910 195 104 98 chr17 65077642 65078114 -20360366 - L1ME3 LINE L1 -407 5755 5281 550 308 69 27 chr17 65078117 65078600 -20359880 - L1ME3 LINE L1 -924 5222 4696 2297 79 3 13 chr17 65078600 65078903 -20359577 - AluSq SINE Alu -11 302 3 550 308 69 27 chr17 65078903 65078965 -20359515 - L1ME3 LINE L1 -1450 4696 4638 885 232 79 13 chr17 65079430 65079662 -20358818 + MIR SINE MIR 1 228 -34 195 246 0 0 chr17 65079801 65079858 -20358622 + (TA)n Simple_repeat Simple_repeat 1 57 0 667 264 43 97 chr17 65079872 65080365 -20358115 + L1MEc LINE L1 1313 1778 -4618 513 207 0 83 chr17 65080421 65080566 -20357914 + FLAM_A SINE Alu 1 133 -9 2079 88 46 3 chr17 65080569 65080853 -20357627 + AluSc SINE Alu 1 296 -13 521 219 58 0 chr17 65080853 65080990 -20357490 + L1MD3 LINE L1 7792 7936 -59 4275 177 41 40 chr17 65081013 65082312 -20356168 - L1MB7 LINE L1 -7 6177 4870 1935 150 0 17 chr17 65082312 65082605 -20355875 + AluJo SINE Alu 11 298 -14 4275 177 41 40 chr17 65082605 65082961 -20355519 - L1MB7 LINE L1 -1314 4870 4516 516 55 0 121 chr17 65083537 65083628 -20354852 + MADE1 DNA Mariner 1 80 0 2108 124 0 0 chr17 65083721 65084012 -20354468 - AluJb SINE Alu -21 291 1 23 0 0 0 chr17 65084039 65084062 -20354418 + AT_rich Low_complexity Low_complexity 1 23 0 182 259 74 0 chr17 65084498 65084552 -20353928 + L3 LINE CR1 836 893 -684 887 252 31 40 chr17 65084827 65085053 -20353427 + MIR SINE MIR 18 241 -21 568 239 120 11 chr17 65086625 65086809 -20351671 + L1MEc LINE L1 2709 2912 -3303 775 215 44 4 chr17 65086826 65087054 -20351426 - L1MB7 LINE L1 -3083 3063 2827 25 51 0 0 chr17 65087231 65087270 -20351210 + AT_rich Low_complexity Low_complexity 1 39 0 1645 227 86 124 chr17 65087385 65088456 -20350024 + L2 LINE L2 2170 3216 -97 439 345 7 14 chr17 65088867 65089009 -20349471 + MIR3 SINE MIR 4 144 -64 * 592 332 144 0 chr17 65089001 65089230 -20349250 - MIR SINE MIR 0 262 1 251 211 28 127 chr17 65089383 65089525 -20348955 + MIR SINE MIR 79 206 -56 2090 142 3 3 chr17 65090435 65090745 -20347735 - AluSx SINE Alu -2 310 1 204 231 0 0 chr17 65090885 65090924 -20347556 - MER5A DNA MER1_type -83 106 68 1953 147 14 0 chr17 65091590 65091882 -20346598 + AluSx SINE Alu 1 296 -16 2398 103 3 0 chr17 65092323 65092634 -20345846 + AluSq SINE Alu 1 312 -1 514 280 6 57 chr17 65095280 65095437 -20343043 - L1M2 LINE L1 -504 5658 5513 987 236 96 17 chr17 65095461 65095754 -20342726 + MER46C DNA MER2_type 23 338 0 275 280 78 0 chr17 65095754 65095899 -20342581 - L1ME LINE L1 -679 5491 5330 4911 159 47 101 chr17 65096369 65096733 -20341747 + L1MB4 LINE L1 4272 4654 -1526 750 189 8 0 chr17 65096733 65096865 -20341615 + FLAM_A SINE Alu 1 133 0 4911 159 47 101 chr17 65096865 65097052 -20341428 + L1MB4 LINE L1 4654 4850 -1330 2146 133 0 0 chr17 65097052 65097361 -20341119 + AluSx SINE Alu 1 309 -3 4911 159 47 101 chr17 65097361 65097872 -20340608 + L1MB4 LINE L1 4850 5387 -793 1744 137 33 42 chr17 65097872 65098178 -20340302 + AluSx SINE Alu 1 303 -9 4911 159 47 101 chr17 65098178 65099152 -20339328 + L1MB4 LINE L1 5387 6178 -2 1462 266 67 19 chr17 65099406 65099453 -20339027 - L1ME3 LINE L1 -222 5940 5897 2534 74 0 0 chr17 65099453 65099764 -20338716 - AluY SINE Alu 0 311 1 1462 266 67 19 chr17 65099764 65100356 -20338124 - L1ME3 LINE L1 -265 5897 5270 1738 268 68 57 chr17 65100591 65101255 -20337225 - L1ME3 LINE L1 -1310 4836 4181 1849 130 13 39 chr17 65101255 65101562 -20336918 - AluJo SINE Alu -13 299 1 1738 268 68 57 chr17 65101562 65101668 -20336812 - L1ME3 LINE L1 -1965 4181 4078 2055 114 0 4 chr17 65101668 65101980 -20336500 - AluSg SINE Alu 0 313 3 1738 268 68 57 chr17 65101980 65102405 -20336075 - L1ME3 LINE L1 -2068 4078 3625 252 266 122 68 chr17 65102924 65103187 -20335293 - L1ME3 LINE L1 -2530 3616 3340 220 295 85 103 chr17 65103447 65103671 -20334809 + L2 LINE L2 2684 2903 -411 327 323 87 16 chr17 65103935 65104062 -20334418 + L2 LINE L2 3136 3271 -1 2349 49 0 0 chr17 65104129 65104414 -20334066 - L1PA6 LINE L1 0 6154 5870 855 145 0 8 chr17 65104850 65104981 -20333499 - FLAM_C SINE Alu -3 130 1 1582 213 60 9 chr17 65106694 65107041 -20331439 - MLT1A1 LTR MaLR 0 365 1 502 244 240 0 chr17 65107325 65107575 -20330905 + L1ME1 LINE L1 2349 2658 -3488 2926 221 77 33 chr17 65107576 65107948 -20330532 + MER21B LTR ERV1 1 355 -508 379 76 0 30 chr17 65107948 65108014 -20330466 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2257 81 0 7 chr17 65108016 65108300 -20330180 - AluY SINE Alu -29 282 1 2202 115 0 0 chr17 65108302 65108598 -20329882 - AluSx SINE Alu -16 296 1 2926 221 77 33 chr17 65108598 65108997 -20329483 + MER21B LTR ERV1 355 812 -51 4715 233 75 55 chr17 65109013 65110257 -20328223 + L1ME1 LINE L1 2660 3877 -2269 1536 158 71 4 chr17 65110257 65110511 -20327969 + AluJo SINE Alu 6 276 -36 4715 233 75 55 chr17 65110511 65110863 -20327617 + L1ME1 LINE L1 3877 4220 -1926 2072 131 7 0 chr17 65110863 65111160 -20327320 + AluSq SINE Alu 1 299 -14 4715 233 75 55 chr17 65111160 65111443 -20327037 + L1ME1 LINE L1 4220 4578 -1568 460 223 43 0 chr17 65111445 65111539 -20326941 + MER58 DNA MER1_type 1 98 -243 29 0 0 0 chr17 65111542 65111571 -20326909 + AT_rich Low_complexity Low_complexity 1 29 0 372 253 11 0 chr17 65111620 65111707 -20326773 + MER58 DNA MER1_type 2332 2419 -1 1052 210 56 53 chr17 65111709 65111741 -20326739 + L1ME1 LINE L1 4574 4604 -1542 1590 119 5 5 chr17 65111741 65111960 -20326520 - AluSp SINE Alu -94 219 1 1052 210 56 53 chr17 65111960 65111990 -20326490 + L1ME1 LINE L1 4604 4632 -1514 360 87 11 130 chr17 65111990 65112082 -20326398 + L1PA8 LINE L1 6092 6172 0 1052 210 56 53 chr17 65112082 65112262 -20326218 + L1ME1 LINE L1 4632 4821 -1325 2209 114 0 0 chr17 65112262 65112559 -20325921 + AluSx SINE Alu 1 297 -15 1052 210 56 53 chr17 65112559 65112652 -20325828 + L1ME1 LINE L1 4821 4912 -1234 2288 96 0 7 chr17 65112669 65112970 -20325510 + AluSx SINE Alu 1 299 -13 304 222 0 0 chr17 65112970 65113033 -20325447 + L1MC4 LINE L1 6641 6703 -1339 330 239 23 23 chr17 65113036 65113124 -20325356 + L1MC4 LINE L1 6615 6702 -1340 3058 219 81 32 chr17 65113129 65113405 -20325075 + L1ME1 LINE L1 4920 5181 -985 2140 102 16 38 chr17 65113405 65113719 -20324761 + AluSg SINE Alu 1 307 -3 3058 219 81 32 chr17 65113719 65114232 -20324248 + L1ME1 LINE L1 5181 5667 -499 1663 169 103 3 chr17 65114232 65114563 -20323917 - MLT1A1 LTR MaLR -1 364 1 3058 219 81 32 chr17 65114563 65114962 -20323518 + L1ME1 LINE L1 5667 6162 -4 303 28 0 0 chr17 65114970 65115006 -20323474 + (CA)n Simple_repeat Simple_repeat 2 37 0 2300 176 78 8 chr17 65115010 65115487 -20322993 + L1MB5 LINE L1 5618 6127 -47 644 250 39 17 chr17 65115491 65115671 -20322809 - MER66A LTR ERV1 -10 468 285 605 206 174 86 chr17 65115795 65115825 -20322655 - MER41B LTR ERV1 -209 426 400 182 36 0 36 chr17 65115825 65115853 -20322627 + (TA)n Simple_repeat Simple_repeat 1 27 0 605 206 174 86 chr17 65115853 65116117 -20322363 - MER41B LTR ERV1 -235 400 100 250 139 0 0 chr17 65116117 65116160 -20322320 + L1MB5 LINE L1 6123 6165 -9 2002 116 46 0 chr17 65116500 65116785 -20321695 - AluSx SINE Alu -11 301 4 846 326 197 13 chr17 65117294 65118057 -20320423 + L2 LINE L2 1747 2649 -665 1478 209 107 10 chr17 65118076 65118487 -20319993 + Charlie4a DNA MER1_type 36 486 -22 263 364 27 49 chr17 65118490 65118674 -20319806 + L2 LINE L2 2656 2835 -479 317 250 142 4 chr17 65118684 65118839 -20319641 - MER63A DNA MER1_type 0 210 27 25055 159 24 28 chr17 65118843 65120095 -20318385 - L1PA10 LINE L1 -2 6481 5226 2090 121 3 0 chr17 65120095 65120412 -20318068 - AluSx SINE Alu 0 318 1 25055 159 24 28 chr17 65120412 65122020 -20316460 - L1PA10 LINE L1 -1257 5226 3613 1842 138 0 80 chr17 65122020 65122345 -20316135 - AluSx SINE Alu -13 299 1 25055 159 24 28 chr17 65122345 65125921 -20312559 - L1PA10 LINE L1 -2870 3613 10 252 211 0 18 chr17 65125929 65125986 -20312494 - MER63A DNA MER1_type 0 56 1 21 0 0 0 chr17 65126888 65126909 -20311571 + AT_rich Low_complexity Low_complexity 1 21 0 366 280 30 30 chr17 65127049 65127181 -20311299 + MIR SINE MIR 70 201 -61 4553 177 38 4 chr17 65128759 65130036 -20308444 - L1PB4 LINE L1 -9 6147 4827 243 61 0 0 chr17 65130331 65130364 -20308116 + (TTG)n Simple_repeat Simple_repeat 2 34 0 1864 144 58 19 chr17 65130915 65131276 -20307204 - THE1C LTR MaLR 0 375 1 857 163 0 0 chr17 65131287 65131422 -20307058 + FLAM_C SINE Alu 7 141 -2 1986 161 126 0 chr17 65131957 65132337 -20306143 - MSTA LTR MaLR 0 428 1 189 317 10 59 chr17 65133008 65133109 -20305371 + L2 LINE L2 2990 3085 -187 657 240 67 0 chr17 65133686 65133836 -20304644 + MER58A DNA MER1_type 2 161 0 23 54 0 0 chr17 65134627 65134664 -20303816 + AT_rich Low_complexity Low_complexity 1 37 0 344 187 0 143 chr17 65134739 65134842 -20303638 - MER2 DNA MER2_type -152 87 1 1260 219 48 0 chr17 65134889 65135199 -20303281 + L1ME2 LINE L1 5641 5965 -199 526 194 244 19 chr17 65135238 65135398 -20303082 + LTR40b LTR ERVL 267 462 0 1307 231 147 54 chr17 65135399 65135992 -20302488 + L1ME3 LINE L1 5438 6085 -77 7848 118 45 13 chr17 65135996 65136970 -20301510 - HSMAR2 DNA Mariner -1 1301 275 2172 105 87 3 chr17 65136970 65137304 -20301176 + THE1B LTR MaLR 1 362 -2 7848 118 45 13 chr17 65137304 65137585 -20300895 - HSMAR2 DNA Mariner -1027 275 5 2119 123 0 10 chr17 65137675 65137810 -20300670 + AluSx SINE Alu 1 136 -176 2243 90 0 10 chr17 65137810 65138110 -20300370 + AluSg1 SINE Alu 1 297 -12 2119 123 0 10 chr17 65138110 65138275 -20300205 + AluSx SINE Alu 136 298 -14 3355 217 74 9 chr17 65138551 65139573 -20298907 - L1MB7 LINE L1 0 6184 5099 22 0 0 0 chr17 65141114 65141136 -20297344 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr17 65141499 65141528 -20296952 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr17 65142532 65142559 -20295921 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 404 177 13 25 chr17 65142571 65142650 -20295830 - FLAM SINE Alu -17 116 39 541 255 17 121 chr17 65142904 65143135 -20295345 - L2 LINE L2 0 3313 3107 184 313 55 94 chr17 65143298 65143426 -20295054 - L2 LINE L2 -23 3249 3127 21 0 0 0 chr17 65144437 65144458 -20294022 + AT_rich Low_complexity Low_complexity 1 21 0 3356 106 12 40 chr17 65144476 65145044 -20293436 - L1MA3 LINE L1 0 7724 7173 373 100 17 0 chr17 65145059 65145119 -20293361 - Alu SINE Alu -7 294 234 12363 152 100 30 chr17 65145119 65145873 -20292607 - L1MA3 LINE L1 -536 7188 6489 1611 153 20 48 chr17 65145873 65146051 -20292429 - AluJb SINE Alu -23 289 121 186 71 0 0 chr17 65146051 65146079 -20292401 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1611 153 20 48 chr17 65146079 65146194 -20292286 - AluJb SINE Alu -191 121 4 12363 152 100 30 chr17 65146194 65147303 -20291177 - L1MA3 LINE L1 -1235 6489 5460 2105 52 59 15 chr17 65147303 65147641 -20290839 - AluY SINE Alu 0 350 1 12363 152 100 30 chr17 65147641 65148148 -20290332 - L1MA3 LINE L1 -2264 5460 4990 2230 110 7 7 chr17 65148148 65148457 -20290023 - AluSx SINE Alu -3 309 1 12363 152 100 30 chr17 65148457 65149614 -20288866 - L1MA3 LINE L1 -2734 4990 3916 1859 159 0 7 chr17 65149614 65149909 -20288571 - AluJo SINE Alu -19 293 1 12363 152 100 30 chr17 65149909 65150704 -20287776 - L1MA3 LINE L1 -3808 3916 2523 5358 181 57 10 chr17 65150689 65151776 -20286704 - L1MA3 LINE L1 -6047 1518 13 * 343 246 141 49 chr17 65152379 65152521 -20285959 + MIR3 SINE MIR 6 160 -48 686 269 102 0 chr17 65152521 65152718 -20285762 - MER58A DNA MER1_type 0 224 8 1641 154 84 4 chr17 65152753 65153026 -20285454 + AluSx SINE Alu 3 297 -15 1346 249 142 22 chr17 65153112 65153199 -20285281 - LTR50 LTR ERVL 0 795 720 1622 179 0 42 chr17 65153199 65153511 -20284969 + AluJo SINE Alu 1 299 -13 1346 249 142 22 chr17 65153511 65153932 -20284548 - LTR50 LTR ERVL -75 720 226 865 244 65 21 chr17 65154302 65154441 -20284039 - ERVL LTR ERVL -272 5492 5360 1400 174 34 47 chr17 65154441 65154739 -20283741 - AluJo SINE Alu -18 294 1 865 244 65 21 chr17 65154739 65154878 -20283602 - ERVL LTR ERVL -404 5360 5202 198 309 15 0 chr17 65154915 65154983 -20283497 + L3b LINE CR1 1312 1380 -203 367 294 69 0 chr17 65156002 65156104 -20282376 - L2 LINE L2 -4 3268 3160 363 284 88 56 chr17 65156292 65156542 -20281938 - MLT1H LTR MaLR -221 328 71 1238 174 0 24 chr17 65157004 65157216 -20281264 + AluJb SINE Alu 84 290 -22 1198 167 72 9 chr17 65157390 65157611 -20280869 + MER46A DNA MER2_type 1 235 -1 199 333 0 0 chr17 65158101 65158152 -20280328 + L2 LINE L2 3210 3260 -12 297 340 148 6 chr17 65158286 65158448 -20280032 + L3 LINE CR1 1380 1564 -13 45 0 0 0 chr17 65158449 65158494 -20279986 + AT_rich Low_complexity Low_complexity 1 45 0 1761 148 7 14 chr17 65159116 65159394 -20279086 - AluJb SINE Alu -27 285 10 2103 126 81 0 chr17 65160503 65160837 -20277643 + MER46B DNA MER2_type 1 236 0 5272 150 12 33 chr17 65162921 65163689 -20274791 - L1PA13 LINE L1 -3 6160 5378 1739 67 0 17 chr17 65163689 65163927 -20274553 - L1PA8 LINE L1 0 6172 5939 5272 150 12 33 chr17 65163927 65164956 -20273524 - L1PA13 LINE L1 -785 5378 4402 329 189 46 74 chr17 65165193 65165250 -20273230 - Charlie1 DNA MER1_type 0 2761 2704 1352 147 41 85 chr17 65165250 65165543 -20272937 + AluJb SINE Alu 4 283 -19 329 189 46 74 chr17 65165543 65165660 -20272820 - Charlie1 DNA MER1_type -57 2704 2592 716 225 33 7 chr17 65165723 65165874 -20272606 - Charlie1 DNA MER1_type -2595 166 12 249 286 0 13 chr17 65165903 65165980 -20272500 + L2 LINE L2 2505 2580 -734 809 200 56 17 chr17 65166007 65166187 -20272293 + MER5A DNA MER1_type 2 188 -1 28 71 0 0 chr17 65166725 65166781 -20271699 + AT_rich Low_complexity Low_complexity 1 56 0 1943 110 46 14 chr17 65166781 65167062 -20271418 + AluSq SINE Alu 1 290 -23 317 218 35 11 chr17 65169024 65169111 -20269369 - MIR SINE MIR 0 262 174 943 122 0 0 chr17 65169534 65169681 -20268799 - L1PA14 LINE L1 0 6161 6015 1482 187 60 0 chr17 65170139 65170407 -20268073 + AluJo SINE Alu 1 284 -28 5114 125 55 4 chr17 65170417 65171331 -20267149 + L1MB1 LINE L1 5176 6135 -33 513 191 191 30 chr17 65171528 65171696 -20266784 - MIR SINE MIR -4 258 64 310 313 118 7 chr17 65172338 65172482 -20265998 - MIR3 SINE MIR -30 178 19 1027 288 43 89 chr17 65173243 65173872 -20264608 + L1ME LINE L1 3 602 -5468 1544 213 79 19 chr17 65173891 65174323 -20264157 + MLT1C LTR MaLR 10 467 0 1081 269 12 50 chr17 65174323 65174802 -20263678 + L1M4 LINE L1 3103 3563 -2583 1072 227 77 40 chr17 65174792 65175760 -20262720 - L1ME LINE L1 -522 5713 4782 * 216 0 0 0 chr17 65175760 65175784 -20262696 + (TGGA)n Simple_repeat Simple_repeat 1 24 0 1072 227 77 40 chr17 65175784 65176681 -20261799 - L1ME LINE L1 -1453 4782 3719 1824 244 75 16 chr17 65176720 65177735 -20260745 - L1MEc LINE L1 -3196 3019 1970 2903 190 24 6 chr17 65177740 65178276 -20260204 - MER68 LTR ERV1 -15 547 2 4543 249 67 46 chr17 65178279 65179184 -20259296 - L1MEc LINE L1 -4425 1971 1087 1862 132 3 44 chr17 65179184 65179479 -20259001 - AluSx SINE Alu -26 286 4 4543 249 67 46 chr17 65179479 65179936 -20258544 - L1MEc LINE L1 -5309 1087 564 2036 103 28 7 chr17 65179936 65180226 -20258254 - AluSx SINE Alu -16 296 1 4543 249 67 46 chr17 65180226 65180550 -20257930 - L1MEc LINE L1 -5832 564 248 1096 264 15 3 chr17 65180547 65180877 -20257603 - L1MCa LINE L1 -3272 3154 2821 * 8372 134 55 29 chr17 65180958 65182775 -20255705 - L1MCa LINE L1 -4455 1971 19 819 262 21 26 chr17 65182765 65182998 -20255482 - L1MEc LINE L1 -6128 268 37 * 457 284 136 0 chr17 65183923 65184092 -20254388 - MIR SINE MIR -4 258 67 * 777 375 100 16 chr17 65184091 65184884 -20253596 - L2 LINE L2 -739 2575 1717 541 262 193 0 chr17 65185024 65185211 -20253269 - MIR SINE MIR -35 227 5 1376 206 58 3 chr17 65185986 65186278 -20252202 - AluJb SINE Alu -4 308 1 1754 156 17 17 chr17 65186445 65186747 -20251733 + AluJb SINE Alu 1 302 -10 327 290 11 75 chr17 65186819 65187005 -20251475 - L1MC5 LINE L1 -44 7917 7744 320 248 79 20 chr17 65187846 65187947 -20250533 - 7SK RNA RNA -74 119 13 378 237 45 20 chr17 65188361 65188528 -20249952 + L1MB5 LINE L1 13 469 -6177 * 2758 219 29 10 chr17 65188521 65189247 -20249233 + L1MB5 LINE L1 830 1569 -4973 293 177 0 67 chr17 65189244 65189355 -20249125 + L1MB5 LINE L1 4741 4839 -1805 * 4664 190 45 10 chr17 65189365 65190951 -20247529 + L1MB5 LINE L1 5036 6672 0 28015 124 9 18 chr17 65191004 65195016 -20243464 - L1PA8 LINE L1 -1 6486 2491 2185 116 7 0 chr17 65195016 65195310 -20243170 - AluSx SINE Alu -14 298 3 28015 124 9 18 chr17 65195310 65197775 -20240705 - L1PA8 LINE L1 -3996 2491 4 21 0 0 0 chr17 65198636 65198657 -20239823 + AT_rich Low_complexity Low_complexity 1 21 0 630 197 152 28 chr17 65198680 65198858 -20239622 - L2 LINE L2 0 3313 3114 1742 140 39 18 chr17 65198923 65199208 -20239272 + AluJo SINE Alu 1 291 -21 518 299 32 11 chr17 65199284 65199471 -20239009 - L2 LINE L2 -409 2905 2715 2255 82 0 0 chr17 65199997 65200315 -20238165 - AluY SINE Alu 0 318 1 30 27 0 0 chr17 65200801 65200838 -20237642 + AT_rich Low_complexity Low_complexity 1 37 0 35 24 0 0 chr17 65201126 65201168 -20237312 + AT_rich Low_complexity Low_complexity 1 42 0 207 146 0 0 chr17 65201414 65201455 -20237025 + (TG)n Simple_repeat Simple_repeat 2 42 0 359 309 124 30 chr17 65201941 65202263 -20236217 + L1ME LINE L1 4615 4984 -1162 2148 115 3 3 chr17 65202416 65202711 -20235769 + AluSx SINE Alu 1 295 -17 480 258 80 70 chr17 65202789 65203243 -20235237 + L1ME LINE L1 5245 5721 -400 361 224 94 0 chr17 65203297 65203382 -20235098 + MIR SINE MIR 87 179 -83 520 280 31 78 chr17 65203409 65203710 -20234770 + L1ME4a LINE L1 5677 5944 -177 2839 146 105 2 chr17 65203815 65204350 -20234130 + L1MB7 LINE L1 5571 6160 -24 2959 131 14 24 chr17 65204489 65204984 -20233496 + L1PA16 LINE L1 5668 6157 -9 280 288 12 12 chr17 65205477 65205557 -20232923 - L2 LINE L2 0 3313 3234 789 283 111 0 chr17 65207491 65207717 -20230763 - MIR SINE MIR -10 252 2 201 250 0 0 chr17 65207944 65207988 -20230492 + L2 LINE L2 3209 3252 -20 503 289 0 33 chr17 65208236 65208388 -20230092 + MIR3 SINE MIR 34 180 -28 32 75 0 0 chr17 65209190 65209257 -20229223 + AT_rich Low_complexity Low_complexity 1 67 0 204 211 0 19 chr17 65209659 65209711 -20228769 + (CCA)n Simple_repeat Simple_repeat 3 53 0 2671 168 25 30 chr17 65210570 65211135 -20227345 - L1MB8 LINE L1 -6 6172 5611 209 167 37 93 chr17 65211508 65211562 -20226918 - L3 LINE CR1 0 1577 1527 1887 149 0 20 chr17 65211605 65211901 -20226579 - AluSx SINE Alu -22 290 1 2955 241 138 37 chr17 65212030 65213167 -20225313 - HAL1 LINE L1 0 2507 1205 2132 133 3 0 chr17 65213167 65213461 -20225019 + AluSx SINE Alu 1 295 -17 2955 241 138 37 chr17 65213461 65213701 -20224779 - HAL1 LINE L1 -1302 1205 991 1457 256 94 21 chr17 65213705 65214228 -20224252 - HAL1 LINE L1 -1689 818 258 2387 40 0 0 chr17 65214488 65214760 -20223720 + AluY SINE Alu 22 293 -18 544 218 89 28 chr17 65214818 65214997 -20223483 - L2 LINE L2 0 3313 3124 467 308 62 31 chr17 65215868 65216063 -20222417 - MIR SINE MIR -14 248 48 685 235 67 0 chr17 65216070 65216219 -20222261 - MIR SINE MIR -91 171 13 203 138 0 0 chr17 65216727 65216756 -20221724 + (CA)n Simple_repeat Simple_repeat 2 30 0 289 184 223 39 chr17 65217000 65217103 -20221377 + L2 LINE L2 3156 3277 -36 648 242 38 32 chr17 65217345 65217502 -20220978 - MER20 DNA MER1_type -57 162 5 932 344 48 42 chr17 65217510 65217943 -20220537 + L2 LINE L2 2836 3271 -1 645 291 99 13 chr17 65218393 65218775 -20219705 + L1MC4a LINE L1 4741 5155 -991 1143 204 0 0 chr17 65218781 65218972 -20219508 + AluJb SINE Alu 84 274 -38 183 42 0 0 chr17 65218975 65218999 -20219481 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3081 127 21 3 chr17 65219087 65219726 -20218754 + L1MA7 LINE L1 5100 5747 -544 1665 115 0 34 chr17 65219754 65220023 -20218457 + L1PA15 LINE L1 5572 5831 -335 2084 43 16 0 chr17 65220029 65220285 -20218195 - L1PA3 LINE L1 -1 6154 5895 1838 135 55 3 chr17 65220285 65220593 -20217887 + L1PA15 LINE L1 5836 6162 -3 348 83 0 0 chr17 65220610 65220658 -20217822 + (TG)n Simple_repeat Simple_repeat 2 49 0 2320 139 54 60 chr17 65220666 65221182 -20217298 + L1MA7 LINE L1 5777 6289 -2 517 179 207 8 chr17 65221185 65221470 -20217010 + Charlie1 DNA MER1_type 2261 2630 -131 1036 176 44 33 chr17 65221500 65221773 -20216707 + L1MC4a LINE L1 5255 5530 -2278 5561 136 30 3 chr17 65221775 65222637 -20215843 + Tigger1 DNA MER2_type 92 976 -1442 24 0 0 0 chr17 65222687 65222711 -20215769 + AT_rich Low_complexity Low_complexity 1 24 0 2291 93 0 0 chr17 65223044 65223333 -20215147 + AluSq SINE Alu 1 289 -24 671 272 68 19 chr17 65223384 65223693 -20214787 - L1ME4a LINE L1 -281 5840 5517 471 18 0 0 chr17 65224086 65224142 -20214338 + (TG)n Simple_repeat Simple_repeat 2 57 0 9087 128 21 14 chr17 65224897 65226342 -20212138 + Tigger1 DNA MER2_type 963 2417 -1 4660 210 57 17 chr17 65226343 65227009 -20211471 + L1MC4a LINE L1 6604 7242 -566 1917 179 97 3 chr17 65227009 65227400 -20211080 - MSTA LTR MaLR 0 428 1 4660 210 57 17 chr17 65227400 65227581 -20210899 + L1MC4a LINE L1 7242 7414 -394 2289 98 0 7 chr17 65227581 65227878 -20210602 + AluSg SINE Alu 1 295 -15 4660 210 57 17 chr17 65227878 65228188 -20210292 + L1MC4a LINE L1 7414 7808 0 23 0 0 0 chr17 65229521 65229544 -20208936 + AT_rich Low_complexity Low_complexity 1 23 0 357 332 112 4 chr17 65229622 65229863 -20208617 - L1ME4a LINE L1 -1812 4334 4068 4589 110 9 0 chr17 65229864 65230525 -20207955 - L1PA13 LINE L1 0 6163 5497 21 36 0 0 chr17 65232948 65232976 -20205504 + AT_rich Low_complexity Low_complexity 1 28 0 296 208 0 133 chr17 65233009 65233129 -20205351 + L1MB7 LINE L1 6076 6179 -5 198 373 41 30 chr17 65234199 65234368 -20204112 + L2 LINE L2 2894 3064 -208 39 0 0 0 chr17 65234465 65234504 -20203976 + AT_rich Low_complexity Low_complexity 1 39 0 2332 52 0 0 chr17 65234772 65235044 -20203436 + AluY SINE Alu 28 299 -12 1236 222 117 0 chr17 65235349 65235709 -20202771 + L1ME2 LINE L1 2110 2511 -3635 243 175 0 0 chr17 65235712 65235752 -20202728 + Alu SINE Alu 157 196 -112 1691 173 31 0 chr17 65235873 65236162 -20202318 + AluJo SINE Alu 1 298 -14 420 200 11 0 chr17 65236163 65236258 -20202222 + L1ME2 LINE L1 3844 3939 -2207 1954 126 68 0 chr17 65236258 65236551 -20201929 + MER1B DNA MER1_type 1 313 -26 1103 216 108 47 chr17 65236558 65236966 -20201514 + L1ME2 LINE L1 3936 4368 -1778 1290 235 165 0 chr17 65236976 65237334 -20201146 + MLT1G LTR MaLR 2 418 -172 636 219 165 27 chr17 65237388 65237588 -20200892 + L1ME2 LINE L1 4377 4548 -1598 2466 80 3 0 chr17 65237588 65237890 -20200590 + AluSp SINE Alu 1 303 -10 636 219 165 27 chr17 65237890 65238023 -20200457 + L1ME2 LINE L1 4548 4756 -1390 228 171 0 0 chr17 65238042 65238077 -20200403 + MER63 DNA MER1_type 1 35 -895 261 295 0 0 chr17 65238097 65238158 -20200322 + MER63 DNA MER1_type 999 1059 -2 2536 208 66 39 chr17 65238158 65238960 -20199520 + L1ME2 LINE L1 4763 5604 -560 1671 172 7 14 chr17 65238960 65239256 -20199224 - AluJo SINE Alu -18 294 1 2536 208 66 39 chr17 65239256 65239545 -20198935 + L1ME2 LINE L1 5604 5884 -280 716 253 43 0 chr17 65239551 65239737 -20198743 + L1ME2 LINE L1 5952 6145 -19 24 32 0 0 chr17 65239744 65239775 -20198705 + AT_rich Low_complexity Low_complexity 1 31 0 1750 156 33 7 chr17 65240018 65240318 -20198162 - AluJo SINE Alu 0 307 1 23 33 0 0 chr17 65240973 65241003 -20197477 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr17 65241438 65241462 -20197018 + AT_rich Low_complexity Low_complexity 1 24 0 614 232 111 37 chr17 65241737 65241927 -20196553 + MER63A DNA MER1_type 1 204 -6 781 260 74 39 chr17 65245042 65245327 -20193153 - L2 LINE L2 -2 3311 3017 * 2029 263 132 67 chr17 65245305 65246411 -20192069 - L2 LINE L2 -585 2729 1552 192 302 128 12 chr17 65248201 65248287 -20190193 - MIR SINE MIR -108 154 59 310 323 32 0 chr17 65248304 65248428 -20190052 - MER117 DNA MER1_type -1 196 69 540 309 60 10 chr17 65248913 65249114 -20189366 + MIR SINE MIR 12 222 -40 237 33 0 0 chr17 65250598 65250628 -20187852 + (GA)n Simple_repeat Simple_repeat 2 31 0 * 390 42 0 0 chr17 65250627 65250675 -20187805 + (TG)n Simple_repeat Simple_repeat 2 49 0 279 0 0 0 chr17 65251227 65251258 -20187222 + (TG)n Simple_repeat Simple_repeat 2 32 0 1438 189 54 4 chr17 65251315 65251595 -20186885 - AluJb SINE Alu -13 299 6 2061 120 10 13 chr17 65251599 65251898 -20186582 - AluSx SINE Alu -14 298 1 4542 104 44 16 chr17 65252737 65252760 -20185720 - L1MA2 LINE L1 0 6304 6283 198 103 0 0 chr17 65252760 65252789 -20185691 + (TA)n Simple_repeat Simple_repeat 2 30 0 4542 104 44 16 chr17 65252789 65253440 -20185040 - L1MA2 LINE L1 -21 6283 5611 4622 179 25 22 chr17 65253440 65254306 -20184174 - MER52A LTR ERV1 0 1755 908 4116 164 95 46 chr17 65254306 65255157 -20183323 - MER52A LTR ERV1 -658 1097 205 4085 126 27 2 chr17 65255165 65256087 -20182393 - L1M1 LINE L1 -695 5610 4664 278 86 0 0 chr17 65256804 65256839 -20181641 - U2 snRNA snRNA -153 35 1 952 174 19 25 chr17 65256891 65257052 -20181428 + FRAM SINE Alu 1 160 -6 1050 269 100 37 chr17 65257569 65258322 -20180158 + L2 LINE L2 2500 3307 -6 212 222 63 48 chr17 65258488 65258551 -20179929 - L2 LINE L2 -8 3305 3242 325 334 94 75 chr17 65259421 65259546 -20178934 - L2 LINE L2 0 3272 3151 1597 118 41 0 chr17 65259546 65259767 -20178713 - MER30 DNA MER1_type 0 230 1 325 334 94 75 chr17 65259767 65260919 -20177561 - L2 LINE L2 -121 3151 1945 1569 140 20 143 chr17 65261804 65262153 -20176327 - AluYb8 SINE Alu -2 306 1 2526 74 0 0 chr17 65262419 65262728 -20175752 - AluY SINE Alu -2 309 1 1234 257 62 19 chr17 65262805 65263168 -20175312 - MLT1J1 LTR MaLR 0 446 72 2459 77 0 3 chr17 65263433 65263733 -20174747 + AluSq SINE Alu 1 299 -14 439 269 172 8 chr17 65264831 65264965 -20173515 - MIR SINE MIR -70 192 37 1934 158 3 7 chr17 65265144 65265447 -20173033 - AluJo SINE Alu -10 302 1 24 24 0 24 chr17 65265929 65265951 -20172529 + AT_rich Low_complexity Low_complexity 1 23 -18 2071 136 0 0 chr17 65265951 65266237 -20172243 + AluSx SINE Alu 3 288 -24 24 24 0 24 chr17 65266237 65266256 -20172224 + AT_rich Low_complexity Low_complexity 23 41 0 1940 158 3 7 chr17 65266283 65266586 -20171894 - AluJo SINE Alu -8 304 3 349 348 24 18 chr17 65266777 65266941 -20171539 - L2 LINE L2 -182 3090 2926 2194 118 7 3 chr17 65268058 65268355 -20170125 + AluSg SINE Alu 1 298 -12 1288 68 0 57 chr17 65268402 65268578 -20169902 + AluY SINE Alu 1 166 -145 712 126 213 46 chr17 65268578 65268752 -20169728 + THE1C LTR MaLR 62 264 -111 1516 81 0 0 chr17 65269065 65269250 -20169230 - AluY SINE Alu -9 302 118 5000 109 85 4 chr17 65269257 65269998 -20168482 - THE1C-int LTR MaLR -779 801 1 2153 103 94 26 chr17 65269998 65270349 -20168131 - THE1C LTR MaLR 0 375 1 182 114 0 29 chr17 65270571 65270606 -20167874 + (CATA)n Simple_repeat Simple_repeat 2 35 0 390 256 195 32 chr17 65270622 65270899 -20167581 - MLT1L LTR MaLR 0 615 294 441 308 116 18 chr17 65271116 65271392 -20167088 - L2 LINE L2 -942 2372 2070 1846 120 8 0 chr17 65271675 65271933 -20166547 + AluSx SINE Alu 37 296 -16 266 349 160 0 chr17 65272674 65272780 -20165700 - L2 LINE L2 0 3272 3150 706 201 5 93 chr17 65275166 65275292 -20163188 - MER5B DNA MER1_type 0 178 73 4920 141 33 5 chr17 65275292 65276087 -20162393 - L1MC2 LINE L1 0 6344 5528 706 201 5 93 chr17 65276087 65276154 -20162326 - MER5B DNA MER1_type -105 73 2 605 280 75 23 chr17 65276213 65276320 -20162160 + MIR SINE MIR 2 102 -160 1739 155 4 7 chr17 65276320 65276598 -20161882 - AluJo SINE Alu -11 301 25 605 280 75 23 chr17 65276598 65276704 -20161776 + MIR SINE MIR 102 226 -36 348 252 52 74 chr17 65277289 65277424 -20161056 + MIR SINE MIR 123 254 -8 980 236 81 42 chr17 65278476 65278858 -20159622 + L1MC5 LINE L1 7530 7926 -35 30 77 0 0 chr17 65278989 65279054 -20159426 + AT_rich Low_complexity Low_complexity 1 65 0 1674 180 14 3 chr17 65279106 65279400 -20159080 - AluJo SINE Alu -15 297 1 1009 266 97 60 chr17 65280154 65280558 -20157922 - MLT1J2 LTR MaLR 0 450 1 32 57 0 0 chr17 65281121 65281174 -20157306 + AT_rich Low_complexity Low_complexity 1 53 0 1248 218 118 15 chr17 65282744 65283015 -20155465 - AluJo SINE Alu -3 299 1 282 287 48 4 chr17 65283605 65283736 -20154744 + MIR SINE MIR 18 154 -54 212 352 28 0 chr17 65283854 65283962 -20154518 + L2 LINE L2 1859 1969 -1345 2378 90 0 3 chr17 65283976 65284277 -20154203 - AluSx SINE Alu -12 300 1 300 182 0 0 chr17 65284887 65284942 -20153538 - L1MD3 LINE L1 -14 7981 7927 1145 50 14 0 chr17 65284942 65285083 -20153397 + L1MA5 LINE L1 6156 6298 -2 3409 164 17 203 chr17 65285115 65286007 -20152473 - L1MC4a LINE L1 -40 7768 7187 2364 78 3 3 chr17 65286007 65286322 -20152158 - AluSq SINE Alu 0 315 1 3409 164 17 203 chr17 65286322 65286717 -20151763 - L1MC4a LINE L1 -621 7187 6720 181 256 188 86 chr17 65287079 65287196 -20151284 + L2 LINE L2 3141 3269 -3 232 274 39 111 chr17 65288361 65288500 -20149980 - MIR3 SINE MIR -1 207 80 360 345 69 23 chr17 65288500 65288674 -20149806 + MIR SINE MIR 1 182 -80 600 202 118 73 chr17 65288754 65288869 -20149611 + MER63 DNA MER1_type 3 111 -950 2183 133 41 19 chr17 65288869 65289236 -20149244 + L1PA16 LINE L1 5792 6166 0 2367 97 3 0 chr17 65289243 65289551 -20148929 + AluSq SINE Alu 1 309 -4 600 202 118 73 chr17 65289551 65289785 -20148695 + MER63 DNA MER1_type 116 435 -626 1682 190 66 30 chr17 65289805 65290169 -20148311 + MER63 DNA MER1_type 665 1041 -19 1826 158 9 44 chr17 65290413 65290730 -20147750 + AluJb SINE Alu 1 306 -6 23 33 0 0 chr17 65292811 65292841 -20145639 + AT_rich Low_complexity Low_complexity 1 30 0 2399 90 0 29 chr17 65292892 65293203 -20145277 - AluSx SINE Alu -10 302 1 507 177 0 118 chr17 65293585 65293771 -20144709 - MER104 DNA Tc2 -3 177 14 438 306 21 7 chr17 65294142 65294286 -20144194 + L2 LINE L2 2589 2734 -580 184 125 200 0 chr17 65294645 65294685 -20143795 + MIR SINE MIR 213 260 -2 225 254 17 17 chr17 65294748 65294807 -20143673 + HSATI Satellite Satellite 233 291 -286 410 360 124 17 chr17 65300230 65300633 -20137847 - L2 LINE L2 -529 2785 2340 1834 160 6 49 chr17 65301411 65301736 -20136744 - AluJo SINE Alu -1 311 1 1484 117 22 59 chr17 65301777 65302050 -20136430 - Tigger3(Golem) DNA MER2_type -1 3028 2766 1361 118 30 135 chr17 65302050 65302079 -20136401 - L1MA8 LINE L1 -35 6256 6226 1133 152 12 68 chr17 65302079 65302329 -20136151 - MER46A DNA MER2_type 0 236 1 1361 118 30 135 chr17 65302329 65302663 -20135817 - L1MA8 LINE L1 -65 6226 5931 2103 94 4 0 chr17 65302874 65303140 -20135340 + AluSx SINE Alu 45 311 -1 236 308 0 13 chr17 65304848 65304926 -20133554 + CT-rich Low_complexity Low_complexity 2 78 0 255 196 141 43 chr17 65309873 65309965 -20128515 - MIR SINE MIR -6 256 156 198 0 0 0 chr17 65315859 65315881 -20122599 + (TAAG)n Simple_repeat Simple_repeat 4 25 0 2502 60 0 10 chr17 65320978 65321277 -20117203 + AluY SINE Alu 1 296 -15 2313 112 20 0 chr17 65321321 65321625 -20116855 - AluSx SINE Alu -2 310 1 2015 142 3 3 chr17 65321631 65321927 -20116553 - AluJo SINE Alu -16 296 1 283 319 116 0 chr17 65322439 65322577 -20115903 - MIR SINE MIR -28 234 81 234 0 0 0 chr17 65322939 65322965 -20115515 + (A)n Simple_repeat Simple_repeat 1 26 0 2518 68 3 10 chr17 65323055 65323362 -20115118 + AluSp SINE Alu 1 305 -8 2833 106 116 21 chr17 65323582 65324063 -20114417 + MER1A DNA MER1_type 1 527 0 1607 67 90 22 chr17 65325301 65325524 -20112956 - AluY SINE Alu -10 301 64 1344 172 22 0 chr17 65326996 65327228 -20111252 + MER61-int LTR ERV1 3745 3981 -1236 226 150 33 33 chr17 65330690 65330750 -20107730 + C-rich Low_complexity Low_complexity 6 65 0 2113 123 10 26 chr17 65331504 65331813 -20106667 + AluSx SINE Alu 1 304 -8 369 308 130 40 chr17 65331896 65332172 -20106308 - L1ME4a LINE L1 -128 5993 5693 249 337 105 12 chr17 65333513 65333685 -20104795 - MIR SINE MIR -8 254 67 315 204 65 21 chr17 65335763 65335856 -20102624 - ORSL DNA AcHobo -41 234 138 1585 187 14 14 chr17 65335879 65336168 -20102312 - AluJo SINE Alu -11 301 13 33 0 0 0 chr17 65336243 65336276 -20102204 + AT_rich Low_complexity Low_complexity 1 33 0 1027 114 13 13 chr17 65336277 65336435 -20102045 - AluSp SINE Alu -56 257 100 363 210 0 12 chr17 65336447 65336528 -20101952 - ORSL DNA AcHobo -193 82 3 314 367 47 0 chr17 65336563 65336732 -20101748 + MIR SINE MIR 72 248 -14 2194 125 3 7 chr17 65337144 65337449 -20101031 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr17 65337839 65337859 -20100621 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 215 206 0 63 chr17 65338438 65338501 -20099979 + C-rich Low_complexity Low_complexity 5 63 0 2266 78 3 0 chr17 65340551 65340846 -20097634 + AluSp SINE Alu 15 310 -3 279 189 168 21 chr17 65340936 65341031 -20097449 + L2 LINE L2 2952 3060 -253 354 251 86 75 chr17 65341237 65341302 -20097178 + MER53 DNA DNA 1 64 -125 2339 95 0 0 chr17 65341302 65341607 -20096873 + AluSx SINE Alu 1 305 -7 354 251 86 75 chr17 65341607 65341679 -20096801 + MER53 DNA DNA 64 143 -46 1823 158 3 3 chr17 65341679 65341971 -20096509 + AluSx SINE Alu 1 292 -20 354 251 86 75 chr17 65341971 65342019 -20096461 + MER53 DNA DNA 143 189 0 335 283 75 8 chr17 65342221 65342341 -20096139 - L2 LINE L2 0 3313 3186 2158 83 31 0 chr17 65343232 65343520 -20094960 - AluSp SINE Alu -16 297 1 377 318 73 80 chr17 65343830 65343971 -20094509 - L2 LINE L2 -1 3312 3171 1537 125 4 59 chr17 65343971 65344227 -20094253 + AluSx SINE Alu 3 244 -68 377 318 73 80 chr17 65344227 65344497 -20093983 - L2 LINE L2 -142 3171 2904 2204 120 0 0 chr17 65346540 65346840 -20091640 - AluSx SINE Alu -12 300 1 205 25 0 75 chr17 65347192 65347232 -20091248 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 5415 43 29 138 chr17 65348054 65349026 -20089454 + SVA Other Other 1 866 -520 6365 37 10 14 chr17 65349043 65349941 -20088539 + SVA Other Other 613 1381 -5 2329 84 3 0 chr17 65349950 65350249 -20088231 + AluSp SINE Alu 1 300 -13 2112 123 7 0 chr17 65350524 65350834 -20087646 + AluSx SINE Alu 1 312 0 553 257 88 0 chr17 65350972 65351143 -20087337 + MIR SINE MIR 55 240 -22 2165 110 7 0 chr17 65351323 65351622 -20086858 - AluSp SINE Alu -12 301 1 228 269 17 84 chr17 65352338 65352457 -20086023 + L2 LINE L2 2950 3060 -212 2626 127 60 0 chr17 65352511 65352974 -20085506 + MER41C LTR ERV1 1 491 -63 33 0 0 0 chr17 65353074 65353107 -20085373 + AT_rich Low_complexity Low_complexity 1 33 0 2037 117 0 33 chr17 65353251 65353551 -20084929 + AluSx SINE Alu 1 290 -22 1992 138 0 10 chr17 65353561 65353859 -20084621 + AluJb SINE Alu 1 295 -17 2208 104 7 0 chr17 65353883 65354182 -20084298 + AluSx SINE Alu 1 301 -11 2195 110 3 3 chr17 65354559 65354858 -20083622 + AluSx SINE Alu 1 299 -13 528 273 239 0 chr17 65355249 65355458 -20083022 - MIR SINE MIR -2 260 2 2049 117 40 10 chr17 65356364 65356664 -20081816 - AluSq SINE Alu -4 309 1 228 250 0 0 chr17 65358385 65358441 -20080039 - L2 LINE L2 0 3313 3258 912 167 0 0 chr17 65358663 65358801 -20079679 + FRAM SINE Alu 8 145 -31 225 0 0 0 chr17 65358801 65358826 -20079654 + (T)n Simple_repeat Simple_repeat 1 25 0 327 312 68 41 chr17 65358938 65359159 -20079321 + MIR SINE MIR 20 246 -16 207 270 45 36 chr17 65359194 65359305 -20079175 + L3 LINE CR1 833 944 -633 230 371 31 71 chr17 65359367 65359543 -20078937 + L3b LINE CR1 1102 1284 -299 219 69 0 0 chr17 65359543 65359572 -20078908 + (TG)n Simple_repeat Simple_repeat 2 30 0 230 371 31 71 chr17 65359572 65359594 -20078886 + L3b LINE CR1 1284 1305 -278 2298 106 3 0 chr17 65359594 65359905 -20078575 - AluSq SINE Alu -1 312 1 230 371 31 71 chr17 65359905 65359999 -20078481 + L3b LINE CR1 1305 1383 -200 621 100 0 0 chr17 65360906 65360996 -20077484 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 925 195 21 5 chr17 65360999 65361189 -20077291 - AluSg/x SINE Alu 0 310 118 204 316 125 53 chr17 65361370 65361522 -20076958 - L2 LINE L2 -34 3279 3117 424 245 31 0 chr17 65361527 65361625 -20076855 - MIR SINE MIR -86 176 76 2068 118 3 0 chr17 65361745 65362034 -20076446 + AluJo SINE Alu 1 290 -22 308 304 17 37 chr17 65362306 65362474 -20076006 + MIR SINE MIR 34 201 -54 1785 141 24 14 chr17 65362478 65362775 -20075705 + AluJb SINE Alu 1 300 -12 285 278 9 83 chr17 65363191 65363299 -20075181 - MIR SINE MIR -71 191 92 2037 112 16 7 chr17 65364003 65364307 -20074173 - AluSx SINE Alu -5 307 1 209 398 20 0 chr17 65365225 65365323 -20073157 + MIR SINE MIR 92 191 -71 * 223 303 174 44 chr17 65365318 65365754 -20072726 + L2 LINE L2 2807 3299 -14 556 306 20 36 chr17 65367441 65367637 -20070843 - MIR3 SINE MIR -13 195 3 399 56 0 0 chr17 65367718 65367772 -20070708 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 1504 128 165 24 chr17 65368442 65368815 -20069665 - MSTA LTR MaLR -6 422 7 849 265 47 21 chr17 65368965 65369199 -20069281 - MIR SINE MIR 0 262 23 364 157 33 141 chr17 65369320 65369363 -20069117 - LTR24C LTR ERV1 -277 358 312 2102 124 13 0 chr17 65369363 65369669 -20068811 + AluSx SINE Alu 1 310 -2 364 157 33 141 chr17 65369669 65369746 -20068734 - LTR24C LTR ERV1 -323 312 251 627 298 31 4 chr17 65369749 65370004 -20068476 + L1M4 LINE L1 5016 5277 -869 2054 106 3 0 chr17 65370106 65370388 -20068092 + AluSg SINE Alu 28 310 0 25 0 0 0 chr17 65370419 65370444 -20068036 + AT_rich Low_complexity Low_complexity 1 25 0 626 140 53 44 chr17 65370456 65370570 -20067910 - FLAM_A SINE Alu -18 115 1 2234 79 3 16 chr17 65372646 65372951 -20065529 - AluY SINE Alu -6 305 5 225 0 0 0 chr17 65375481 65375506 -20062974 + (T)n Simple_repeat Simple_repeat 1 25 0 984 54 23 0 chr17 65375506 65375636 -20062844 - AluSq/x SINE Alu -180 133 1 264 309 154 27 chr17 65376284 65376472 -20062008 + MIR SINE MIR 31 242 -20 241 232 29 0 chr17 65377786 65377855 -20060625 + Charlie2 DNA MER1_type 1913 1983 -879 1689 181 3 10 chr17 65377858 65378150 -20060330 - AluJb SINE Alu -12 300 11 1602 111 0 0 chr17 65378191 65378408 -20060072 - AluSx SINE Alu -95 217 1 1211 124 0 0 chr17 65378417 65378595 -20059885 - AluSg/x SINE Alu -1 309 132 353 217 202 44 chr17 65378631 65378903 -20059577 + Charlie2 DNA MER1_type 2124 2438 -424 637 187 0 0 chr17 65378903 65379010 -20059470 - AluJ SINE Alu -22 290 184 684 126 136 0 chr17 65379013 65379116 -20059364 - AluJ SINE Alu -185 127 11 1215 77 6 0 chr17 65379131 65379287 -20059193 - AluY SINE Alu -21 290 134 521 247 50 77 chr17 65380441 65380623 -20057857 - MIR SINE MIR -73 189 13 818 268 69 12 chr17 65381048 65381294 -20057186 - MIR SINE MIR 0 262 3 234 91 0 0 chr17 65383926 65383959 -20054521 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 1994 106 13 29 chr17 65384770 65385082 -20053398 - AluSx SINE Alu -5 307 1 282 29 0 0 chr17 65385484 65385519 -20052961 + (CCCCG)n Simple_repeat Simple_repeat 1 35 0 24 95 0 0 chr17 65385567 65385609 -20052871 + GC_rich Low_complexity Low_complexity 1 42 0 242 183 14 0 chr17 65385681 65385752 -20052728 + G-rich Low_complexity Low_complexity 2 73 0 30 83 0 0 chr17 65385764 65385812 -20052668 + GC_rich Low_complexity Low_complexity 1 48 0 307 296 148 30 chr17 65387564 65387733 -20050747 - MER5A DNA MER1_type 0 189 1 319 205 51 13 chr17 65387755 65387833 -20050647 - MIR SINE MIR -92 116 36 195 167 0 0 chr17 65388064 65388106 -20050374 + (TG)n Simple_repeat Simple_repeat 1 42 0 1031 104 191 6 chr17 65388886 65389069 -20049411 - AluJo SINE Alu -11 301 85 2190 89 0 3 chr17 65391332 65391650 -20046830 - AluSx SINE Alu 0 317 1 443 230 55 85 chr17 65393766 65393931 -20044549 + MIR3 SINE MIR 42 201 -7 552 223 31 8 chr17 65395686 65395816 -20042664 - MIR SINE MIR -110 152 20 417 292 73 62 chr17 65397637 65398156 -20040324 + L2 LINE L2 2548 3059 -213 214 234 0 0 chr17 65398256 65398303 -20040177 + L2 LINE L2 3263 3309 -4 236 301 193 56 chr17 65398976 65399019 -20039461 - MIR SINE MIR -1 261 225 817 181 26 104 chr17 65399019 65399097 -20039383 - MER45A DNA AcHobo -1403 178 96 2049 136 0 7 chr17 65399097 65399398 -20039082 + AluSx SINE Alu 1 299 -13 817 181 26 104 chr17 65399398 65399414 -20039066 - MER45A DNA AcHobo -1485 96 80 2278 80 0 46 chr17 65399414 65399738 -20038742 + AluSg SINE Alu 2 310 0 817 181 26 104 chr17 65399738 65399835 -20038645 - MER45A DNA AcHobo -1501 80 1 236 301 193 56 chr17 65399835 65400004 -20038476 - MIR SINE MIR -37 225 20 2031 112 6 13 chr17 65400184 65400496 -20037984 - AluSx SINE Alu -1 311 2 234 325 245 0 chr17 65401570 65401721 -20036759 - MIR SINE MIR -51 211 24 344 155 0 0 chr17 65401904 65401962 -20036518 + MIR SINE MIR 66 123 -85 433 301 130 25 chr17 65402680 65402919 -20035561 + L2 LINE L2 2817 3080 -192 2034 114 0 20 chr17 65402921 65403218 -20035262 + AluSg1 SINE Alu 1 291 -18 21 0 0 0 chr17 65403240 65403261 -20035219 + AT_rich Low_complexity Low_complexity 1 21 0 247 196 36 0 chr17 65403406 65403462 -20035018 + MIR SINE MIR 83 140 -68 1917 95 31 44 chr17 65404062 65404356 -20034124 - AluSx SINE Alu -11 301 12 313 304 0 59 chr17 65404380 65404515 -20033965 - MIR SINE MIR -46 216 90 569 298 13 6 chr17 65405443 65405601 -20032879 - MIR SINE MIR -100 162 4 514 294 59 6 chr17 65407476 65407646 -20030834 + MIR SINE MIR 11 189 -73 1915 79 65 24 chr17 65408768 65409058 -20029422 + AluY SINE Alu 1 302 -9 593 273 32 0 chr17 65409746 65409900 -20028580 - MIR SINE MIR -1 261 103 398 125 50 12 chr17 65409908 65409988 -20028492 + L1ME3A LINE L1 6015 6097 -73 815 216 0 43 chr17 65410033 65410218 -20028262 + AluJo SINE Alu 121 297 -15 185 282 103 13 chr17 65410227 65410305 -20028175 - MIR SINE MIR -165 97 13 1097 204 86 30 chr17 65410342 65410748 -20027732 - Charlie2 DNA MER1_type -3 2859 2431 1382 164 23 77 chr17 65410748 65411058 -20027422 + AluJo SINE Alu 1 293 -19 1823 183 0 0 chr17 65411243 65411554 -20026926 - AluSp SINE Alu -2 311 1 1771 175 28 5 chr17 65411554 65411762 -20026718 - L1M4 LINE L1 -943 5203 4980 1957 157 23 0 chr17 65411762 65412067 -20026413 - AluJb SINE Alu 0 312 1 1771 175 28 5 chr17 65412067 65412252 -20026228 - L1M4 LINE L1 -1166 4980 4801 380 401 0 0 chr17 65412800 65412952 -20025528 - L2 LINE L2 -25 3247 3096 295 258 86 11 chr17 65414254 65414347 -20024133 + MIR3 SINE MIR 86 185 -23 23 0 0 0 chr17 65415047 65415070 -20023410 + GC_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr17 65415148 65415178 -20023302 + GC_rich Low_complexity Low_complexity 1 30 0 234 91 0 0 chr17 65415178 65415211 -20023269 + (CTG)n Simple_repeat Simple_repeat 2 34 0 42 0 0 0 chr17 65415402 65415444 -20023036 + GC_rich Low_complexity Low_complexity 1 42 0 1787 167 17 7 chr17 65416459 65416759 -20021721 + AluJb SINE Alu 1 303 -9 181 318 125 0 chr17 65416775 65416863 -20021617 - MIR SINE MIR -77 131 33 216 303 53 0 chr17 65418756 65418832 -20019648 - MIR SINE MIR -106 156 77 2209 81 7 16 chr17 65420099 65420408 -20018072 + AluSq SINE Alu 2 307 -6 187 302 0 0 chr17 65421411 65421454 -20017026 + L2 LINE L2 3030 3072 -200 2270 67 14 0 chr17 65423595 65423892 -20014588 + AluY SINE Alu 1 301 -10 629 170 0 0 chr17 65423959 65424065 -20014415 + FLAM_C SINE Alu 37 142 -1 244 288 129 23 chr17 65424238 65424370 -20014110 - MIR SINE MIR -42 220 75 1006 118 0 0 chr17 65426054 65426189 -20012291 + AluSq/x SINE Alu 1 135 -177 1774 146 48 10 chr17 65426189 65426483 -20011997 + AluJb SINE Alu 1 305 -7 231 311 39 10 chr17 65428023 65428126 -20010354 - MIR SINE MIR -64 144 39 221 135 19 0 chr17 65428168 65428220 -20010260 + CT-rich Low_complexity Low_complexity 1 53 0 350 269 125 34 chr17 65428511 65428714 -20009766 + MIR SINE MIR 2 223 -39 599 251 105 123 chr17 65429924 65430493 -20007987 - MLT1G LTR MaLR -1 589 31 253 328 34 25 chr17 65430718 65430837 -20007643 + L3b LINE CR1 1279 1398 -185 901 132 0 7 chr17 65430858 65430994 -20007486 + FLAM_C SINE Alu 1 135 -8 201 311 9 9 chr17 65432226 65432332 -20006148 + (TG)n Simple_repeat Simple_repeat 1 106 0 326 291 60 30 chr17 65433040 65433174 -20005306 + MIR3 SINE MIR 3 140 -68 277 295 124 9 chr17 65433534 65433639 -20004841 + L2 LINE L2 3155 3271 -1 224 337 12 12 chr17 65434159 65434242 -20004238 - L3 LINE CR1 -104 1473 1391 248 71 48 0 chr17 65435206 65435248 -20003232 + (CCCTG)n Simple_repeat Simple_repeat 3 46 0 339 242 215 5 chr17 65436450 65436636 -20001844 - L1ME4a LINE L1 -27 6094 5870 2308 84 0 7 chr17 65437143 65437442 -20001038 - AluSq SINE Alu -16 297 1 2001 88 3 60 chr17 65437613 65437932 -20000548 - AluSx SINE Alu -11 301 1 245 342 70 6 chr17 65438268 65438335 -20000145 + MIR SINE MIR 57 118 -144 2564 58 0 0 chr17 65438335 65438646 -19999834 - AluY SINE Alu 0 311 1 245 342 70 6 chr17 65438646 65438736 -19999744 + MIR SINE MIR 118 224 -38 244 182 13 42 chr17 65439026 65439192 -19999288 + CT-rich Low_complexity Low_complexity 1 161 0 806 222 62 22 chr17 65639231 65639386 -19799094 - Charlie1 DNA MER1_type -2525 236 68 2493 83 0 0 chr17 65639386 65639687 -19798793 + AluSc SINE Alu 1 301 -8 806 222 62 22 chr17 65639687 65639756 -19798724 - Charlie1 DNA MER1_type -2693 68 3 798 329 64 33 chr17 65639768 65640261 -19798219 + L2 LINE L2 2511 3012 -260 1583 142 0 20 chr17 65640323 65640570 -19797910 - AluJb SINE Alu 0 312 71 532 115 10 10 chr17 65640676 65640772 -19797708 + (TCCC)n Simple_repeat Simple_repeat 3 98 0 2400 100 3 0 chr17 65640841 65641151 -19797329 - AluSq SINE Alu -2 311 1 337 300 112 32 chr17 65641151 65641491 -19796989 + L2 LINE L2 2892 3262 -51 2044 94 76 0 chr17 65642422 65642698 -19795782 - AluSx SINE Alu -15 297 1 294 27 0 0 chr17 65642732 65642769 -19795711 - AluY SINE Alu -47 254 218 224 222 0 0 chr17 65643114 65643159 -19795321 + L2 LINE L2 3262 3306 -7 186 95 48 24 chr17 65643684 65643726 -19794754 + L2 LINE L2 3266 3308 -5 1631 163 59 3 chr17 65643912 65644200 -19794280 - AluJo SINE Alu -8 304 1 889 172 0 56 chr17 65644402 65644582 -19793898 + FRAM SINE Alu 1 169 -7 289 175 32 32 chr17 65644599 65644662 -19793818 + MIR SINE MIR 152 214 -48 513 208 67 0 chr17 65644915 65645035 -19793445 + L1MB5 LINE L1 5642 5769 -405 809 165 0 15 chr17 65645036 65645169 -19793311 + FLAM_C SINE Alu 1 131 -12 2152 160 21 24 chr17 65645169 65645587 -19792893 + L1MB5 LINE L1 5758 6174 0 419 220 184 0 chr17 65645590 65645699 -19792781 + FLAM_A SINE Alu 1 129 -4 585 330 46 30 chr17 65645726 65646089 -19792391 - L2 LINE L2 -86 3227 2703 2186 126 0 0 chr17 65646104 65646398 -19792082 - AluSx SINE Alu -18 294 1 196 231 224 63 chr17 65646482 65646625 -19791855 - MER5A DNA MER1_type -23 166 1 307 238 79 50 chr17 65647002 65647103 -19791377 + MER5A DNA MER1_type 7 110 -79 2413 72 10 3 chr17 65647560 65647865 -19790615 - AluSq SINE Alu -6 307 1 28 71 0 0 chr17 65648695 65648751 -19789729 + GC_rich Low_complexity Low_complexity 1 56 0 1706 154 0 18 chr17 65650743 65651015 -19787465 + AluJo SINE Alu 1 267 -45 2365 75 0 10 chr17 65651076 65651370 -19787110 - AluSg1 SINE Alu -18 291 1 251 28 28 0 chr17 65651610 65651646 -19786834 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 487 258 62 33 chr17 65654389 65654633 -19783847 - MER112 DNA MER1_type -4 252 2 2011 105 84 3 chr17 65654689 65654975 -19783505 - AluSg SINE Alu -1 309 1 294 278 113 26 chr17 65655126 65655188 -19783292 + L2 LINE L2 3102 3157 -115 2114 119 3 7 chr17 65655188 65655482 -19782998 + AluSx SINE Alu 1 293 -19 294 278 113 26 chr17 65655482 65655570 -19782910 + L2 LINE L2 3157 3265 -7 1496 149 4 4 chr17 65655858 65656086 -19782394 + AluJo SINE Alu 66 293 -19 281 161 54 0 chr17 65656165 65656221 -19782259 + MER91B DNA MER1_type 78 136 -54 228 309 131 12 chr17 65660454 65660538 -19777942 - L2 LINE L2 -5 3267 3174 303 172 276 11 chr17 65662305 65662392 -19776088 - Tigger2 DNA MER2_type -10 2708 2599 266 130 74 19 chr17 65662457 65662511 -19775969 - Tigger2 DNA MER2_type -108 2610 2554 192 184 41 61 chr17 65663182 65663231 -19775249 + MIR SINE MIR 16 63 -145 444 271 25 25 chr17 65665406 65665524 -19772956 + L2 LINE L2 3193 3310 -3 231 36 0 0 chr17 65667048 65667076 -19771404 + (GGA)n Simple_repeat Simple_repeat 3 30 0 2614 53 0 0 chr17 65667604 65667903 -19770577 - AluY SINE Alu -12 299 1 555 257 118 51 chr17 65668176 65668413 -19770067 + MIR SINE MIR 4 256 -6 979 186 0 0 chr17 65668417 65668573 -19769907 - FRAM SINE Alu -20 156 1 197 314 20 0 chr17 65668878 65668929 -19769551 + MIR SINE MIR 93 144 -64 398 187 252 0 chr17 65669931 65670038 -19768442 - MER5B DNA MER1_type -4 174 41 2003 113 39 0 chr17 65670435 65670718 -19767762 - AluSx SINE Alu -18 294 1 275 218 197 28 chr17 65673793 65673935 -19764545 + MER46C DNA MER2_type 16 181 -157 243 266 96 0 chr17 65674512 65674606 -19763874 + L1ME LINE L1 5599 5701 -420 445 285 215 14 chr17 65674670 65674884 -19763596 + MIR SINE MIR 6 262 0 524 141 256 0 chr17 65675184 65675305 -19763175 - MER5A DNA MER1_type -37 152 1 2233 109 7 3 chr17 65676236 65676539 -19761941 + AluSx SINE Alu 9 312 0 195 333 64 13 chr17 65676987 65677065 -19761415 + L3 LINE CR1 1116 1197 -380 2283 94 0 20 chr17 65677071 65677369 -19761111 + AluSx SINE Alu 1 292 -20 217 208 111 14 chr17 65677513 65677585 -19760895 + L3 LINE CR1 1332 1410 -167 2290 96 3 0 chr17 65678181 65678474 -19760006 - AluSx SINE Alu -18 294 1 336 271 57 16 chr17 65679775 65679897 -19758583 - L1MC5 LINE L1 -37 7924 7798 309 333 55 27 chr17 65680336 65680519 -19757961 + MIR3 SINE MIR 2 189 -19 1658 129 58 58 chr17 65680826 65681121 -19757359 + AluSq SINE Alu 1 295 -18 2269 110 13 7 chr17 65682743 65683053 -19755427 + AluSx SINE Alu 1 312 0 584 110 60 0 chr17 65683128 65683228 -19755252 + L1MB3 LINE L1 6078 6183 0 2171 114 10 3 chr17 65683778 65684084 -19754396 + AluSx SINE Alu 1 308 -4 949 161 12 19 chr17 65686356 65686517 -19751963 - AluSg/x SINE Alu -16 296 137 889 151 0 0 chr17 65686926 65687052 -19751428 - FLAM_A SINE Alu -6 127 2 3283 176 105 119 chr17 65687098 65687267 -19751213 - Charlie1a DNA MER1_type -1509 1252 1082 2324 105 0 10 chr17 65687267 65687580 -19750900 + AluSx SINE Alu 1 310 -2 3283 176 105 119 chr17 65687580 65687630 -19750850 - Charlie1a DNA MER1_type -1679 1082 1033 1928 118 79 4 chr17 65687630 65687910 -19750570 - AluSx SINE Alu -11 301 1 3283 176 105 119 chr17 65687910 65688291 -19750189 - Charlie1a DNA MER1_type -1728 1033 648 2327 108 3 0 chr17 65688291 65688588 -19749892 - AluSp SINE Alu -15 298 1 3283 176 105 119 chr17 65688588 65688616 -19749864 - Charlie1a DNA MER1_type -2113 648 621 788 167 0 0 chr17 65688616 65688730 -19749750 - AluJb SINE Alu -197 115 2 3283 176 105 119 chr17 65688730 65689255 -19749225 - Charlie1a DNA MER1_type -2140 621 1 676 138 0 3 chr17 65689462 65689694 -19748786 + AluSx SINE Alu 1 305 -5 638 221 0 0 chr17 65689699 65689803 -19748677 + FLAM_A SINE Alu 1 104 -38 1883 137 36 20 chr17 65689862 65690168 -19748312 + AluSx SINE Alu 1 311 -1 1274 156 46 25 chr17 65689930 65690171 -19748309 + AluSg/x SINE Alu 67 362 -119 201 87 43 22 chr17 65690171 65690217 -19748263 + GA-rich Low_complexity Low_complexity 4 50 0 1274 156 46 25 chr17 65690217 65690340 -19748140 + AluSg/x SINE Alu 362 481 0 346 264 104 28 chr17 65690218 65690406 -19748074 + L1M4c LINE L1 947 3464 -2918 * 636 174 41 8 chr17 65692594 65692715 -19745765 + MER8 DNA MER2_type 114 238 -1 848 185 88 29 chr17 65693561 65693766 -19744714 + MER20 DNA MER1_type 3 219 0 1971 81 8 8 chr17 65693843 65694104 -19744376 - AluSp SINE Alu -9 304 44 2134 101 3 42 chr17 65694601 65694909 -19743571 + AluSp SINE Alu 1 296 -17 225 323 0 0 chr17 65695345 65695407 -19743073 + MIR SINE MIR 46 107 -155 401 247 148 101 chr17 65695449 65695587 -19742893 - Charlie8 DNA MER1_type -72 269 305 1294 169 124 48 chr17 65695587 65695860 -19742620 + AluJo SINE Alu 1 294 -18 401 247 148 101 chr17 65695860 65696146 -19742334 - Charlie8 DNA MER1_type -35 306 35 2157 95 33 33 chr17 65696258 65696563 -19741917 - AluSx SINE Alu -7 305 1 237 143 0 0 chr17 65696566 65696608 -19741872 - Alu SINE Alu -4 298 257 405 212 19 28 chr17 65696610 65696769 -19741711 - AluJo SINE Alu -1 301 221 1224 162 11 0 chr17 65696770 65696955 -19741525 - AluJo SINE Alu -125 187 1 258 320 20 27 chr17 65697237 65697336 -19741144 + MIR SINE MIR 49 148 -114 216 0 0 0 chr17 65697336 65697360 -19741120 + (TA)n Simple_repeat Simple_repeat 1 24 0 258 320 20 27 chr17 65697360 65697410 -19741070 + MIR SINE MIR 148 197 -65 362 196 152 122 chr17 65697518 65697653 -19740827 + L1MC5 LINE L1 7627 7756 -205 1799 197 0 7 chr17 65697653 65697963 -19740517 + AluJo SINE Alu 5 312 0 362 196 152 122 chr17 65697963 65698123 -19740357 + L1MC5 LINE L1 7756 7931 -30 2032 119 10 3 chr17 65699157 65699452 -19739028 - AluSq SINE Alu -16 297 1 1282 388 6 31 chr17 65699606 65699926 -19738554 + AluSx SINE Alu 1 312 0 22 0 0 0 chr17 65700103 65700125 -19738355 + AT_rich Low_complexity Low_complexity 1 22 0 1970 113 6 61 chr17 65700285 65700457 -19738023 - AluSx SINE Alu -18 294 145 2193 107 3 0 chr17 65700457 65700747 -19737733 - AluSx SINE Alu -19 293 3 1970 113 6 61 chr17 65700747 65700885 -19737595 - AluSx SINE Alu -167 145 1 213 225 38 25 chr17 65700970 65701050 -19737430 + (CATATA)n Simple_repeat Simple_repeat 2 82 0 643 218 8 0 chr17 65701055 65701188 -19737292 - FRAM SINE Alu -4 172 39 2356 109 3 0 chr17 65701355 65701667 -19736813 + AluSp SINE Alu 1 313 0 1829 134 3 41 chr17 65701715 65701849 -19736631 + AluJb SINE Alu 2 140 -178 2221 126 0 0 chr17 65701849 65702158 -19736322 + AluSx SINE Alu 1 309 -3 1829 134 3 41 chr17 65702158 65702351 -19736129 + AluJb SINE Alu 140 318 0 2198 98 14 7 chr17 65702622 65702917 -19735563 + AluY SINE Alu 3 299 -12 2087 141 3 0 chr17 65703023 65703322 -19735158 + AluSx SINE Alu 1 300 -12 2147 103 7 17 chr17 65703370 65703671 -19734809 - AluSx SINE Alu -14 298 1 2334 95 0 0 chr17 65704252 65704547 -19733933 + AluSg SINE Alu 1 295 -15 22 0 0 0 chr17 65704590 65704612 -19733868 + AT_rich Low_complexity Low_complexity 1 22 0 760 211 6 6 chr17 65704615 65704771 -19733709 + AluJo SINE Alu 113 268 -44 183 42 0 0 chr17 65704791 65704815 -19733665 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1014 161 0 0 chr17 65704843 65704992 -19733488 + FAM SINE Alu 1 41 -8 772 167 0 36 chr17 65705610 65705748 -19732732 - FLAM_C SINE Alu 0 133 1 1879 134 70 3 chr17 65705757 65706041 -19732439 - AluSx SINE Alu -9 303 1 324 304 172 0 chr17 65706084 65706288 -19732192 - L1ME4a LINE L1 -48 6073 5835 251 309 53 0 chr17 65706325 65706419 -19732061 - L1ME4a LINE L1 -408 5713 5615 1505 164 45 35 chr17 65706449 65706735 -19731745 - AluJo SINE Alu -23 289 1 1940 162 0 3 chr17 65707137 65707445 -19731035 - AluSx SINE Alu -3 309 3 232 310 60 20 chr17 65707940 65708040 -19730440 - L2 LINE L2 -20 3252 3149 1802 109 4 8 chr17 65708934 65709182 -19729298 - AluSg SINE Alu -13 297 51 2574 66 0 0 chr17 65709197 65709501 -19728979 - AluY SINE Alu -7 304 1 2340 96 0 0 chr17 65709714 65710015 -19728465 + AluY SINE Alu 2 302 -9 297 235 196 0 chr17 65710649 65710751 -19727729 + L2 LINE L2 3192 3313 0 2442 73 10 0 chr17 65710913 65711214 -19727266 - AluSp SINE Alu -8 305 2 805 157 45 0 chr17 65711355 65711489 -19726991 + FLAM_C SINE Alu 4 143 0 840 169 13 7 chr17 65711490 65711644 -19726836 + L1MB3 LINE L1 5927 6081 -102 1783 178 0 7 chr17 65711670 65711979 -19726501 + AluJo SINE Alu 5 311 -1 21 0 0 0 chr17 65712055 65712076 -19726404 + AT_rich Low_complexity Low_complexity 1 21 0 1976 102 0 4 chr17 65712329 65712585 -19725895 + AluSc SINE Alu 39 293 -16 435 231 219 16 chr17 65712621 65712863 -19725617 - L2 LINE L2 -2 3311 3021 2486 80 0 3 chr17 65713482 65713793 -19724687 + AluY SINE Alu 1 310 -1 1786 159 17 10 chr17 65714021 65714317 -19724163 + AluJo SINE Alu 1 298 -14 403 233 40 53 chr17 65714380 65714464 -19724016 + MIR SINE MIR 65 148 -114 911 129 0 0 chr17 65714464 65714596 -19723884 + FLAM_C SINE Alu 1 132 -1 403 233 40 53 chr17 65714596 65714661 -19723819 + MIR SINE MIR 148 212 -50 867 282 113 13 chr17 65715391 65715943 -19722537 + L2 LINE L2 2700 3313 0 357 162 0 0 chr17 65716960 65717028 -19721452 + (CCG)n Simple_repeat Simple_repeat 2 69 0 2651 50 0 0 chr17 65718677 65718979 -19719501 + AluY SINE Alu 1 302 -9 306 271 76 17 chr17 65718999 65719117 -19719363 - MIR SINE MIR -76 186 62 2352 113 0 0 chr17 65719120 65719430 -19719050 - AluSx SINE Alu -2 310 1 984 148 15 96 chr17 65719794 65720082 -19718398 + MER2 DNA MER2_type 2 345 0 348 83 0 0 chr17 65720166 65720214 -19718266 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 2277 109 6 6 chr17 65720214 65720526 -19717954 - AluSx SINE Alu 0 312 1 2208 97 3 41 chr17 65720959 65721278 -19717202 + AluSx SINE Alu 3 309 -3 1470 104 90 0 chr17 65721351 65721562 -19716918 - MER30 DNA MER1_type 0 230 1 2442 96 3 0 chr17 65721586 65721898 -19716582 - AluSq SINE Alu 0 313 1 1113 150 13 81 chr17 65721961 65722128 -19716352 - AluJo SINE Alu -9 303 155 2009 119 11 11 chr17 65722128 65722414 -19716066 - AluSx SINE Alu -12 300 15 1113 150 13 81 chr17 65722414 65722480 -19716000 - AluJo SINE Alu -157 155 86 1512 199 10 20 chr17 65722510 65722816 -19715664 - AluJb SINE Alu -1 311 9 510 194 119 22 chr17 65723466 65723600 -19714880 + MER58C DNA MER1_type 59 205 -10 727 219 94 26 chr17 65724037 65724270 -19714210 + MIR SINE MIR 13 261 -1 2325 101 0 3 chr17 65724505 65724802 -19713678 + AluSq SINE Alu 1 296 -17 240 337 12 12 chr17 65724819 65724902 -19713578 - MIR SINE MIR -105 103 21 2325 112 3 0 chr17 65725590 65725895 -19712585 + AluSx SINE Alu 1 306 -6 1277 137 137 16 chr17 65725946 65726074 -19712406 - L1MA9 LINE L1 -5 6307 6196 315 0 0 0 chr17 65726074 65726109 -19712371 + (TG)n Simple_repeat Simple_repeat 1 35 0 1277 137 137 16 chr17 65726109 65726235 -19712245 - L1MA9 LINE L1 -116 6196 6022 40 0 0 0 chr17 65727359 65727399 -19711081 + AT_rich Low_complexity Low_complexity 1 40 0 2315 84 0 0 chr17 65727402 65727686 -19710794 - AluSc SINE Alu -25 284 1 1879 181 0 7 chr17 65727686 65727989 -19710491 - AluJb SINE Alu -11 301 1 1567 197 14 17 chr17 65728007 65728302 -19710178 + AluJo SINE Alu 1 294 -18 248 330 108 25 chr17 65728696 65728899 -19709581 - MIR SINE MIR -42 220 1 2234 89 0 54 chr17 65729515 65729830 -19708650 - AluSg SINE Alu -12 298 1 2234 125 7 0 chr17 65730363 65730667 -19707813 - AluSx SINE Alu 0 312 7 2389 83 3 3 chr17 65731144 65731446 -19707034 - AluSc SINE Alu -7 302 1 588 14 0 0 chr17 65731652 65731721 -19706759 + (TA)n Simple_repeat Simple_repeat 1 69 0 2366 106 0 0 chr17 65731721 65732023 -19706457 - AluSx SINE Alu -10 302 1 25 51 0 0 chr17 65732668 65732707 -19705773 + AT_rich Low_complexity Low_complexity 1 39 0 716 191 0 0 chr17 65732707 65732838 -19705642 - FLAM_C SINE Alu -2 131 1 1901 225 127 75 chr17 65732838 65733508 -19704972 - MER21B LTR ERV1 -148 715 11 1136 191 73 4 chr17 65733586 65733832 -19704648 - MLT1E3 LTR MaLR 0 624 362 1788 147 19 44 chr17 65733832 65734151 -19704329 - AluJo SINE Alu -1 311 1 415 216 206 0 chr17 65734151 65734253 -19704227 - FLAM_A SINE Alu -2 131 9 * 882 233 167 28 chr17 65734249 65734614 -19703866 - MLT1E1 LTR MaLR -245 379 1 640 183 8 16 chr17 65735355 65735481 -19702999 - FAM SINE Alu -16 169 45 954 125 0 14 chr17 65735748 65735892 -19702588 - FLAM_C SINE Alu -1 142 1 1824 175 14 0 chr17 65735965 65736257 -19702223 + AluJo SINE Alu 3 298 -14 1876 139 19 32 chr17 65736319 65736628 -19701852 - AluSx SINE Alu -2 310 6 2373 101 0 0 chr17 65737094 65737400 -19701080 - AluSg SINE Alu 0 310 5 263 238 238 25 chr17 65738165 65738287 -19700193 + L3 LINE CR1 1404 1551 -26 25 0 0 0 chr17 65738644 65738669 -19699811 + AT_rich Low_complexity Low_complexity 1 25 0 1298 90 0 0 chr17 65739834 65740000 -19698480 - AluSg/x SINE Alu 0 312 147 1648 172 0 22 chr17 65740050 65740317 -19698163 + AluJo SINE Alu 1 261 -51 2320 74 0 14 chr17 65740344 65740640 -19697840 + AluSg SINE Alu 1 292 -18 1065 151 6 6 chr17 65741256 65741422 -19697058 - FRAM SINE Alu 0 166 1 2367 86 10 0 chr17 65741468 65741759 -19696721 - AluSc SINE Alu -15 294 1 1965 99 40 81 chr17 65741759 65741810 -19696670 - AluSx SINE Alu -3 309 257 234 0 0 0 chr17 65741810 65741836 -19696644 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1965 99 40 81 chr17 65741836 65742106 -19696374 - AluSx SINE Alu -55 257 1 2065 109 7 7 chr17 65742193 65742467 -19696013 - AluSx SINE Alu -4 308 35 442 151 0 27 chr17 65742468 65742541 -19695939 - AluSq/x SINE Alu -198 115 45 698 106 0 29 chr17 65742705 65742809 -19695671 + AluSp/q SINE Alu 200 300 -13 1528 117 0 0 chr17 65742818 65743015 -19695465 + AluSx SINE Alu 1 197 -115 2207 133 0 0 chr17 65743076 65743378 -19695102 + AluSx SINE Alu 1 302 -10 26 0 0 0 chr17 65744621 65744647 -19693833 + AT_rich Low_complexity Low_complexity 1 26 0 24 77 0 0 chr17 65745741 65745793 -19692687 + AT_rich Low_complexity Low_complexity 1 52 0 263 276 175 48 chr17 65746318 65746485 -19691995 + MIR SINE MIR 18 203 -59 2259 115 0 0 chr17 65746740 65747035 -19691445 - AluY SINE Alu -16 295 1 2423 89 0 3 chr17 65747271 65747573 -19690907 + AluSx SINE Alu 1 301 -11 2320 109 0 3 chr17 65747896 65748199 -19690281 + AluSx SINE Alu 1 302 -10 2491 64 0 6 chr17 65748271 65748583 -19689897 - AluY SINE Alu -1 310 1 520 227 281 11 chr17 65750487 65750672 -19687808 + MIR SINE MIR 18 252 -10 2218 114 0 9 chr17 65750686 65751002 -19687478 - AluSq SINE Alu 0 313 1 432 97 0 0 chr17 65751046 65751082 -19687398 + (TA)n Simple_repeat Simple_repeat 1 98 0 432 97 0 0 chr17 65751082 65751144 -19687336 + (TA)n Simple_repeat Simple_repeat 1 62 0 545 195 0 0 chr17 65751164 65751251 -19687229 + AluJ/FLAM SINE Alu 2 88 -224 331 235 74 0 chr17 65751384 65751465 -19687015 + L1MC4 LINE L1 6617 6703 -1339 * 355 252 0 68 chr17 65751442 65751545 -19686935 - L1MC4 LINE L1 -1344 6698 6603 313 280 38 76 chr17 65751480 65751612 -19686868 + L1MC4 LINE L1 6588 6714 -1328 * 570 108 0 0 chr17 65751762 65751836 -19686644 + AluJ/FLAM SINE Alu 24 97 -215 2395 61 41 7 chr17 65752066 65752361 -19686119 - AluY SINE Alu -6 305 1 1412 167 105 4 chr17 65752369 65752654 -19685826 - AluSx SINE Alu 0 311 1 2481 87 0 0 chr17 65752841 65753170 -19685310 - AluSg SINE Alu 0 329 1 1626 180 80 0 chr17 65753214 65753503 -19684977 - AluJb SINE Alu 0 312 1 336 301 30 30 chr17 65753604 65753770 -19684710 - HAL1b LINE L1 -437 911 746 2461 106 0 0 chr17 65753953 65754264 -19684216 - AluSx SINE Alu -1 311 1 315 381 25 0 chr17 65754449 65754567 -19683913 - HAL1 LINE L1 -574 1933 1813 2194 131 0 0 chr17 65754580 65754885 -19683595 - AluSx SINE Alu -7 305 1 2221 102 16 16 chr17 65754994 65755299 -19683181 + AluSx SINE Alu 1 305 -7 242 386 62 0 chr17 65755801 65755946 -19682534 - MIR SINE MIR -108 154 1 2025 121 14 10 chr17 65756066 65756355 -19682125 - AluSx SINE Alu -22 290 1 2106 119 24 3 chr17 65756575 65756870 -19681610 - AluSx SINE Alu -11 301 1 3017 167 60 8 chr17 65757142 65757674 -19680806 - MER68 LTR ERV1 0 562 3 216 255 10 41 chr17 65757779 65757877 -19680603 + A-rich Low_complexity Low_complexity 3 97 0 1840 115 0 27 chr17 65758079 65758340 -19680140 + AluSx SINE Alu 39 292 -20 1442 210 35 24 chr17 65758349 65758451 -19680029 + AluJb SINE Alu 1 100 -212 1718 169 4 0 chr17 65758451 65758717 -19679763 - AluJb SINE Alu -45 267 1 1442 210 35 24 chr17 65758717 65758904 -19679576 + AluJb SINE Alu 100 293 -19 981 128 0 0 chr17 65758926 65759059 -19679421 + AluSq/x SINE Alu 1 133 -179 2399 97 0 13 chr17 65759063 65759374 -19679106 + AluY SINE Alu 1 307 -4 2427 90 0 10 chr17 65759667 65759979 -19678501 + AluSc SINE Alu 1 309 0 2279 83 7 3 chr17 65759988 65760278 -19678202 + AluSc SINE Alu 1 291 -18 1071 177 226 12 chr17 65760289 65760370 -19678110 + AluSg1 SINE Alu 1 63 -246 1982 146 3 13 chr17 65760370 65760672 -19677808 + AluSx SINE Alu 1 299 -13 1071 177 226 12 chr17 65760672 65760833 -19677647 + AluSg1 SINE Alu 63 295 -14 963 242 58 78 chr17 65760842 65761097 -19677383 + HAL1 LINE L1 1839 2098 -409 2382 102 7 0 chr17 65761097 65761401 -19677079 + AluSq SINE Alu 3 308 -5 2289 110 0 19 chr17 65761410 65761728 -19676752 - AluSx SINE Alu 0 312 1 963 242 58 78 chr17 65761728 65761912 -19676568 + HAL1 LINE L1 2106 2279 -228 329 132 38 0 chr17 65761917 65761970 -19676510 + MER66A LTR ERV1 284 338 -140 810 159 8 0 chr17 65762054 65762186 -19676294 + FLAM_C SINE Alu 7 139 -4 1844 122 59 28 chr17 65762327 65762614 -19675866 - AluSx SINE Alu -16 296 1 2432 91 0 3 chr17 65765261 65765570 -19672910 + AluY SINE Alu 1 308 -3 2261 92 0 52 chr17 65765579 65765906 -19672574 + AluSx SINE Alu 1 310 -2 1549 89 0 23 chr17 65765971 65766185 -19672295 - AluSg/x SINE Alu -2 308 100 254 56 0 0 chr17 65766185 65766221 -19672259 + Alu SINE Alu 38 73 -227 1738 91 124 19 chr17 65766519 65766784 -19671696 + AluSg SINE Alu 1 293 -17 2328 105 0 13 chr17 65766788 65767103 -19671377 + AluSx SINE Alu 1 311 -1 2288 114 16 0 chr17 65769487 65769794 -19668686 - AluSx SINE Alu 0 312 1 2458 84 0 3 chr17 65769831 65770139 -19668341 - AluSc SINE Alu -2 307 1 1751 162 4 0 chr17 65770150 65770416 -19668064 - AluJb SINE Alu -45 267 1 2093 100 7 10 chr17 65770426 65770716 -19667764 - AluY SINE Alu 0 311 23 204 314 47 23 chr17 65771083 65771169 -19667311 - MIR3 SINE MIR -10 198 111 2415 90 0 3 chr17 65771179 65771490 -19666990 + AluY SINE Alu 1 310 -1 299 283 114 0 chr17 65771623 65771740 -19666740 - MIR SINE MIR -66 142 43 2093 142 0 7 chr17 65771771 65772074 -19666406 + AluSx SINE Alu 1 301 -11 2198 104 0 0 chr17 65772794 65773081 -19665399 + AluSg1 SINE Alu 14 300 -9 187 290 32 16 chr17 65773616 65773678 -19664802 - L2 LINE L2 -16 3256 3194 * 260 324 56 19 chr17 65773672 65773780 -19664700 - MIR SINE MIR -76 132 21 2341 79 0 7 chr17 65774465 65774768 -19663712 - AluY SINE Alu -10 301 1 216 189 0 0 chr17 65774787 65774824 -19663656 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 343 302 50 39 chr17 65774826 65775005 -19663475 - L2 LINE L2 0 3313 3133 215 169 17 0 chr17 65775015 65775057 -19663423 + (TA)n Simple_repeat Simple_repeat 2 47 -14 2230 107 10 0 chr17 65775057 65775348 -19663132 - AluSq SINE Alu -19 294 1 215 169 17 0 chr17 65775348 65775364 -19663116 + (TA)n Simple_repeat Simple_repeat 47 61 0 2396 101 0 0 chr17 65775653 65775960 -19662520 + AluSq SINE Alu 5 311 -2 2061 122 3 39 chr17 65776454 65776629 -19661851 - AluSx SINE Alu -11 301 140 2211 107 17 0 chr17 65776629 65776920 -19661560 - AluSp SINE Alu -17 296 1 2061 122 3 39 chr17 65776920 65777056 -19661424 - AluSx SINE Alu -172 140 1 258 318 88 29 chr17 65777673 65777843 -19660637 + MIR SINE MIR 77 256 -6 294 215 84 3 chr17 65777867 65777950 -19660530 + L1ME1 LINE L1 6045 6147 -50 2154 124 3 7 chr17 65777951 65778249 -19660231 - AluSx SINE Alu -15 297 1 2267 100 0 0 chr17 65778571 65778889 -19659591 + AluSx SINE Alu 1 318 0 659 143 0 0 chr17 65783140 65783231 -19655249 + FLAM_C SINE Alu 27 117 -26 295 133 0 117 chr17 65784756 65784816 -19653664 - MER91A DNA MER1_type -81 62 7 649 88 10 20 chr17 65785671 65785773 -19652707 + L1PB2 LINE L1 6050 6150 -1 224 184 0 41 chr17 65786571 65786620 -19651860 + MIR SINE MIR 103 149 -113 1988 151 6 13 chr17 65786633 65786944 -19651536 - AluJb SINE Alu -3 309 1 1794 218 70 12 chr17 65787261 65787364 -19651116 - L1 LINE L1 -2837 3309 3213 2372 99 0 0 chr17 65787364 65787658 -19650822 - AluSg SINE Alu -16 294 1 1794 218 70 12 chr17 65787658 65788072 -19650408 - L1 LINE L1 -2933 3213 2762 3327 76 2 52 chr17 65788072 65788231 -19650249 + L1PB2 LINE L1 5676 5841 -310 2551 73 0 0 chr17 65788231 65788532 -19649948 + AluY SINE Alu 1 301 -10 3327 76 2 52 chr17 65788532 65788871 -19649609 + L1PB2 LINE L1 5841 6149 -2 1959 144 33 13 chr17 65789193 65789499 -19648981 + AluJo SINE Alu 1 312 0 213 214 0 0 chr17 65790571 65790613 -19647867 + (CA)n Simple_repeat Simple_repeat 1 42 0 368 345 6 0 chr17 65790859 65791030 -19647450 + (CA)n Simple_repeat Simple_repeat 1 172 0 369 0 0 0 chr17 65793775 65793816 -19644664 + (TG)n Simple_repeat Simple_repeat 1 41 0 231 103 0 0 chr17 65793818 65793857 -19644623 + (GA)n Simple_repeat Simple_repeat 2 40 0 515 277 36 0 chr17 65793859 65793996 -19644484 + MIR SINE MIR 79 220 -42 195 42 0 0 chr17 65794733 65794757 -19643723 + (GA)n Simple_repeat Simple_repeat 2 25 0 208 315 63 9 chr17 65795124 65795235 -19643245 - MER91A DNA MER1_type -51 145 29 202 273 13 13 chr17 65795487 65795564 -19642916 + GA-rich Low_complexity Low_complexity 5 81 0 307 311 22 67 chr17 65795588 65795658 -19642822 - MIR SINE MIR -46 216 153 2121 90 3 51 chr17 65795658 65795970 -19642510 - AluSg SINE Alu -13 297 1 307 311 22 67 chr17 65795970 65796034 -19642446 - MIR SINE MIR -109 153 88 978 120 0 0 chr17 65798989 65799122 -19639358 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr17 65801951 65801973 -19636507 + GC_rich Low_complexity Low_complexity 1 22 0 430 248 119 15 chr17 65802781 65802947 -19635533 - MIR SINE MIR -51 157 16 238 220 85 0 chr17 65803559 65803618 -19634862 - MIR SINE MIR -82 180 117 1213 131 180 52 chr17 65803709 65803976 -19634504 - AluYa5 SINE Alu 0 301 1 201 206 27 110 chr17 65803981 65804054 -19634426 + L3b LINE CR1 1293 1359 -224 731 276 70 9 chr17 65804429 65804598 -19633882 + MIR SINE MIR 21 210 -52 2144 83 0 7 chr17 65804598 65804915 -19633565 + AluSc SINE Alu 3 317 0 731 276 70 9 chr17 65804915 65804972 -19633508 + MIR SINE MIR 210 262 0 1551 95 27 5 chr17 65805006 65805228 -19633252 + AluSg/x SINE Alu 85 311 -1 367 258 54 0 chr17 65805292 65805385 -19633095 - MIR SINE MIR -65 143 46 202 318 63 0 chr17 65805384 65805447 -19633033 - MER91C DNA MER1_type -32 108 42 * 441 245 224 5 chr17 65806397 65806589 -19631891 + MIR SINE MIR 27 260 -2 387 306 191 0 chr17 65806653 65806826 -19631654 + MIR SINE MIR 33 238 -24 625 253 29 36 chr17 65806923 65807117 -19631363 - MIR SINE MIR -35 227 34 1419 164 72 45 chr17 65807758 65808050 -19630430 - AluJo SINE Alu -12 300 1 257 314 70 32 chr17 65808150 65808339 -19630141 - MIR3 SINE MIR -55 207 14 843 214 10 56 chr17 65808355 65808551 -19629929 + MER5A DNA MER1_type 1 187 -2 2066 131 3 3 chr17 65809239 65809551 -19628929 + AluSx SINE Alu 1 312 0 510 142 132 79 chr17 65809576 65809604 -19628876 + L1MC5 LINE L1 7702 7727 -234 1664 129 58 7 chr17 65809604 65809882 -19628598 + AluJb SINE Alu 1 292 -20 510 142 132 79 chr17 65809882 65810043 -19628437 + L1MC5 LINE L1 7727 7901 -60 2328 89 0 0 chr17 65810067 65810370 -19628110 - AluSx SINE Alu -9 303 1 211 304 59 49 chr17 65810556 65810658 -19627822 - MIR SINE MIR -71 191 89 187 339 0 0 chr17 65811193 65811249 -19627231 + MIR SINE MIR 78 133 -75 230 226 19 0 chr17 65814540 65814593 -19623887 + CT-rich Low_complexity Low_complexity 3 56 0 384 77 0 0 chr17 65814594 65814646 -19623834 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 321 324 27 0 chr17 65815685 65815796 -19622684 - MIR3 SINE MIR -2 206 93 270 170 0 0 chr17 65816504 65816551 -19621929 + MIR SINE MIR 216 262 0 2003 135 3 0 chr17 65816564 65816861 -19621619 - AluSx SINE Alu -14 298 1 2298 80 0 0 chr17 65817004 65817303 -19621177 - AluSg SINE Alu -10 300 2 276 276 0 0 chr17 65818421 65818479 -19620001 + MER91C DNA MER1_type 139 196 0 2235 95 0 0 chr17 65818675 65818969 -19619511 - AluSq SINE Alu -18 295 2 364 289 33 8 chr17 65818995 65819116 -19619364 - MIR SINE MIR -72 190 67 2216 102 0 3 chr17 65819168 65819471 -19619009 + AluSx SINE Alu 1 302 -10 379 250 7 46 chr17 65820253 65820351 -19618129 - MER103 DNA DNA -19 147 56 2019 136 7 10 chr17 65820351 65820660 -19617820 - AluSx SINE Alu -4 308 1 379 250 7 46 chr17 65820660 65820713 -19617767 - MER103 DNA DNA -110 56 2 257 336 62 0 chr17 65820863 65820976 -19617504 - L3b LINE CR1 -202 1381 1262 244 313 33 40 chr17 65821022 65821138 -19617342 + MIR3 SINE MIR 59 175 -33 2104 115 3 10 chr17 65821138 65821460 -19617020 - AluSx SINE Alu 0 312 1 244 313 33 40 chr17 65821460 65821493 -19616987 + MIR3 SINE MIR 175 207 -1 866 240 34 0 chr17 65821784 65821988 -19616492 - MIR SINE MIR -28 234 24 927 188 0 0 chr17 65821988 65822148 -19616332 - AluJo/FRAM SINE Alu -19 293 134 2115 132 0 0 chr17 65822148 65822451 -19616029 - AluSx SINE Alu -9 303 1 243 229 0 0 chr17 65823086 65823134 -19615346 - MER91C DNA MER1_type -77 63 16 218 156 22 0 chr17 65824019 65824064 -19614416 + (CAGA)n Simple_repeat Simple_repeat 3 48 0 503 253 58 32 chr17 65824842 65825032 -19613448 + MER117 DNA MER1_type 3 197 0 936 127 60 0 chr17 65826792 65826942 -19611538 + FRAM SINE Alu 6 164 -12 401 290 90 73 chr17 65826986 65827342 -19611138 + L2 LINE L2 2709 3083 -189 2508 319 112 34 chr17 65827402 65828716 -19609764 + L2 LINE L2 768 1977 -1295 1916 156 0 10 chr17 65828716 65829030 -19609450 + AluJo SINE Alu 1 311 -1 2508 319 112 34 chr17 65829030 65829513 -19608967 + L2 LINE L2 1977 2421 -851 2372 90 3 0 chr17 65829513 65829823 -19608657 + AluSx SINE Alu 1 311 -1 2508 319 112 34 chr17 65829823 65830342 -19608138 + L2 LINE L2 2421 3270 -2 319 300 122 74 chr17 65830404 65830741 -19607739 - L2 LINE L2 0 3272 2920 1662 161 55 7 chr17 65831261 65831552 -19606928 + AluJo SINE Alu 2 306 -6 250 213 16 16 chr17 65831580 65831641 -19606839 - MIR SINE MIR -65 143 83 * 610 250 67 44 chr17 65831640 65831820 -19606660 - L2 LINE L2 0 3313 3130 510 287 153 15 chr17 65832082 65832343 -19606137 - L3 LINE CR1 -437 1140 844 2160 196 34 67 chr17 65832343 65832496 -19605984 + L1M4 LINE L1 3709 3866 -2280 1628 146 10 49 chr17 65832496 65832784 -19605696 + AluJb SINE Alu 22 298 -14 2160 196 34 67 chr17 65832784 65832972 -19605508 + L1M4 LINE L1 3866 4059 -2087 2166 102 16 19 chr17 65832972 65833286 -19605194 - AluSp SINE Alu 0 313 1 2160 196 34 67 chr17 65833286 65833570 -19604910 + L1M4 LINE L1 4059 4314 -1832 294 340 162 16 chr17 65833570 65833885 -19604595 - L3 LINE CR1 -737 840 480 1166 119 5 31 chr17 65833907 65834100 -19604380 + L1PA3 LINE L1 5966 6153 -2 2258 98 38 52 chr17 65834115 65834484 -19603996 + THE1B LTR MaLR 1 364 0 1684 129 104 17 chr17 65835511 65835798 -19602682 - AluSx SINE Alu 0 312 1 218 371 0 0 chr17 65836227 65836297 -19602183 - MIR SINE MIR -11 251 182 180 309 25 25 chr17 65836289 65836370 -19602110 - MIR3 SINE MIR -125 83 3 * 390 42 0 0 chr17 65836732 65836780 -19601700 + (CA)n Simple_repeat Simple_repeat 2 49 0 747 199 0 29 chr17 65836880 65837016 -19601464 - FLAM_A SINE Alu -1 132 1 2098 119 0 49 chr17 65837726 65838054 -19600426 + AluSx SINE Alu 1 312 0 586 297 95 26 chr17 65838224 65838456 -19600024 - MIR SINE MIR 0 262 15 267 186 17 8 chr17 65841639 65841757 -19596723 + (CA)n Simple_repeat Simple_repeat 2 120 0 2287 93 14 0 chr17 65842578 65842590 -19595890 - AluSq SINE Alu 0 313 303 1104 74 23 11 chr17 65842590 65842766 -19595714 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2287 93 14 0 chr17 65842766 65843053 -19595427 - AluSq SINE Alu -10 303 3 285 169 15 15 chr17 65843056 65843121 -19595359 + Tigger5 DNA MER2_type 2255 2319 -4 697 253 28 11 chr17 65843786 65843968 -19594512 + MER91B DNA MER1_type 1 185 -5 397 265 99 78 chr17 65844122 65844405 -19594075 + MLT1K LTR MaLR 120 408 -180 320 0 25 0 chr17 65844415 65844455 -19594025 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 923 143 15 12 chr17 65844487 65844786 -19593694 + GA-rich Low_complexity Low_complexity 1 299 0 1018 110 4 27 chr17 65844786 65845040 -19593440 + (GGGA)n Simple_repeat Simple_repeat 4 249 0 353 268 26 68 chr17 65845883 65845976 -19592504 - L1ME LINE L1 -297 5824 5741 2147 124 24 0 chr17 65845976 65846274 -19592206 - AluSx SINE Alu -7 305 1 353 268 26 68 chr17 65846274 65846370 -19592110 - L1ME LINE L1 -380 5741 5643 198 0 0 0 chr17 65846418 65846440 -19592040 + (A)n Simple_repeat Simple_repeat 1 22 0 192 374 16 8 chr17 65846846 65846969 -19591511 + L2 LINE L2 2609 2732 -582 880 269 55 0 chr17 65847057 65847347 -19591133 - LTR16C LTR ERVL 0 491 186 232 239 0 60 chr17 65847502 65847556 -19590924 + (CATATA)n Simple_repeat Simple_repeat 3 54 -11 2348 80 17 0 chr17 65847556 65847845 -19590635 - AluSq SINE Alu -17 296 3 232 239 0 60 chr17 65847845 65847857 -19590623 + (CATATA)n Simple_repeat Simple_repeat 54 65 0 916 193 0 0 chr17 65848010 65848176 -19590304 - FRAM SINE Alu 0 166 1 407 305 23 0 chr17 65850815 65850946 -19587534 + L2 LINE L2 3139 3272 0 339 272 0 0 chr17 65851190 65851337 -19587143 + (TG)n Simple_repeat Simple_repeat 1 147 0 260 341 0 0 chr17 65851357 65851445 -19587035 + (TG)n Simple_repeat Simple_repeat 2 89 0 2356 113 0 0 chr17 65851817 65852128 -19586352 - AluY SINE Alu 0 311 1 2541 56 0 43 chr17 65852142 65852465 -19586015 - AluY SINE Alu -2 309 1 204 236 18 0 chr17 65857197 65857252 -19581228 + L2 LINE L2 2995 3050 -222 474 288 191 12 chr17 65857281 65857600 -19580880 - L2 LINE L2 -1 3312 2937 692 119 16 24 chr17 65857600 65857726 -19580754 + FRAM SINE Alu 43 167 -9 1889 122 75 0 chr17 65857735 65858013 -19580467 + AluJb SINE Alu 1 299 -13 2283 109 3 6 chr17 65858750 65859061 -19579419 - AluSx SINE Alu -2 310 1 755 237 68 0 chr17 65859936 65860113 -19578367 - MIR SINE MIR 0 262 74 321 241 112 17 chr17 65860580 65860696 -19577784 + L2 LINE L2 3138 3264 -8 1195 101 0 0 chr17 65860953 65861102 -19577378 - AluSg/x SINE Alu -18 294 146 3002 129 7 89 chr17 65861159 65861740 -19576740 + LTR26 LTR ERV1 71 603 0 334 313 175 26 chr17 65862042 65862278 -19576202 + L1ME LINE L1 1591 1967 -4528 607 144 17 0 chr17 65862431 65862549 -19575931 + L1MA8 LINE L1 5212 5331 -815 3418 113 12 73 chr17 65862603 65862680 -19575800 + L1MA8 LINE L1 5290 5370 -921 2245 108 0 0 chr17 65862680 65862968 -19575512 + AluY SINE Alu 1 288 -23 3418 113 12 73 chr17 65862968 65863117 -19575363 + L1MA8 LINE L1 5370 5526 -765 844 159 0 0 chr17 65863117 65863249 -19575231 + FLAM_C SINE Alu 2 133 0 3418 113 12 73 chr17 65863249 65863679 -19574801 + L1MA8 LINE L1 5526 5907 -384 858 153 0 0 chr17 65863680 65863798 -19574682 + FLAM_C SINE Alu 1 118 -25 2164 134 0 7 chr17 65863815 65864113 -19574367 + AluSx SINE Alu 1 296 -16 931 188 0 17 chr17 65864206 65864382 -19574098 - MER2 DNA MER2_type -171 174 2 2092 150 3 0 chr17 65864530 65864837 -19573643 + AluSx SINE Alu 1 308 -4 1255 161 0 0 chr17 65864837 65865017 -19573463 + AluSg/x SINE Alu 120 299 -13 598 237 51 43 chr17 65865021 65865274 -19573206 + L1ME LINE L1 2439 2693 -3689 470 249 51 11 chr17 65865485 65865684 -19572796 + L1ME LINE L1 3063 3270 -3112 655 202 0 0 chr17 65865692 65865806 -19572674 + FLAM_C SINE Alu 2 115 -28 990 167 0 0 chr17 65865814 65865994 -19572486 + GA-rich Low_complexity Low_complexity 1 180 0 1022 150 0 10 chr17 65865996 65866282 -19572198 + (GAAA)n Simple_repeat Simple_repeat 3 284 0 766 196 0 0 chr17 65866293 65866426 -19572054 + FLAM_C SINE Alu 1 133 0 700 283 48 99 chr17 65866442 65866569 -19571911 + L1ME LINE L1 3441 3573 -2809 1078 146 22 22 chr17 65866569 65866795 -19571685 + L1MB2 LINE L1 5944 6169 -2 700 283 48 99 chr17 65866795 65866973 -19571507 + L1ME LINE L1 3573 3758 -2624 1923 163 7 0 chr17 65866973 65867268 -19571212 + AluJb SINE Alu 15 311 -1 700 283 48 99 chr17 65867268 65867365 -19571115 + L1ME LINE L1 3758 3858 -2524 706 227 0 0 chr17 65867365 65867497 -19570983 - FLAM_A SINE Alu 0 133 2 700 283 48 99 chr17 65867497 65867793 -19570687 + L1ME LINE L1 3858 4102 -2280 2081 307 85 10 chr17 65868341 65869494 -19568986 + L1ME LINE L1 4074 5312 -1070 2284 84 34 3 chr17 65869561 65869857 -19568623 + AluY SINE Alu 1 305 -6 624 307 62 16 chr17 65869863 65870169 -19568311 + L1ME LINE L1 5574 5893 -505 2371 95 0 3 chr17 65870213 65870519 -19567961 - AluSc SINE Alu -4 305 1 891 160 11 48 chr17 65870525 65870712 -19567768 + MIR SINE MIR 73 252 -10 961 172 0 0 chr17 65870738 65870923 -19567557 + FAM SINE Alu 1 49 0 2284 101 0 16 chr17 65871033 65871340 -19567140 + AluSc SINE Alu 1 302 -7 208 247 103 0 chr17 65871844 65871941 -19566539 - MIR3 SINE MIR -3 205 99 712 111 21 83 chr17 65872229 65872276 -19566204 - L1MB3 LINE L1 0 6183 6135 2135 123 14 0 chr17 65872276 65872569 -19565911 - AluSx SINE Alu -15 297 1 1670 182 30 10 chr17 65872571 65872867 -19565613 - AluJo SINE Alu -10 302 1 712 111 21 83 chr17 65872867 65872960 -19565520 - L1MB3 LINE L1 -49 6134 6049 2242 107 16 38 chr17 65872960 65873091 -19565389 - AluSx SINE Alu -2 310 178 2141 105 3 41 chr17 65873091 65873427 -19565053 - AluSx SINE Alu 0 312 1 2242 107 16 38 chr17 65873427 65873612 -19564868 - AluSx SINE Alu -134 178 1 1240 176 5 5 chr17 65873612 65873833 -19564647 - L1MB3 LINE L1 -352 5831 5611 805 173 0 0 chr17 65873895 65874028 -19564452 + FLAM_C SINE Alu 1 133 0 2294 124 0 9 chr17 65874900 65875215 -19563265 - AluSx SINE Alu 0 312 1 1260 163 5 5 chr17 65875215 65875436 -19563044 - L1MB3 LINE L1 -352 5831 5611 233 70 47 0 chr17 65875430 65875473 -19563007 - L1MB4 LINE L1 -10 6170 6126 * 848 158 0 0 chr17 65875505 65875632 -19562848 + FLAM_C SINE Alu 12 138 -5 725 206 25 19 chr17 65876308 65876468 -19562012 - MER5A DNA MER1_type 0 189 29 236 91 0 0 chr17 65876467 65876500 -19561980 + MER5A DNA MER1_type 35 67 -122 * 456 143 13 0 chr17 65876651 65876728 -19561752 + MIR SINE MIR 80 157 -105 * 800 254 28 32 chr17 65876721 65876973 -19561507 - MIR SINE MIR 0 262 12 216 247 97 11 chr17 65877003 65877096 -19561384 + MIR SINE MIR 162 262 0 180 0 0 0 chr17 65877866 65877886 -19560594 + (TTTTTG)n Simple_repeat Simple_repeat 5 24 0 1133 68 0 0 chr17 65877903 65878035 -19560445 + AluSg SINE Alu 1 132 -178 389 314 16 0 chr17 65878041 65878199 -19560281 + L1MC4 LINE L1 6543 6703 -1139 328 190 17 0 chr17 65878174 65878232 -19560248 - L1MCa LINE L1 -4362 2064 2006 * 1258 123 0 0 chr17 65878235 65878414 -19560066 + AluSg SINE Alu 123 301 -9 1242 134 69 0 chr17 65878580 65878796 -19559684 - MSTA LTR MaLR -9 419 189 1067 79 7 0 chr17 65878796 65878935 -19559545 - AluSg/x SINE Alu -9 301 162 551 266 40 25 chr17 65878945 65879170 -19559310 - MLT1J2 LTR MaLR -183 226 1 269 218 109 20 chr17 65879231 65879332 -19559148 - MER103 DNA DNA -40 126 17 2336 100 10 0 chr17 65879493 65879793 -19558687 + AluSx SINE Alu 1 303 -9 1882 176 0 16 chr17 65880193 65880506 -19557974 + AluJo SINE Alu 1 308 -4 487 320 137 29 chr17 65880700 65880978 -19557502 - L1M4 LINE L1 -3484 2662 2355 234 189 0 0 chr17 65880987 65881024 -19557456 + 5S rRNA rRNA 6 42 -79 23 0 0 0 chr17 65881096 65881119 -19557361 + AT_rich Low_complexity Low_complexity 1 23 0 1879 129 11 11 chr17 65881119 65881405 -19557075 - AluJo SINE Alu -26 286 1 261 0 0 0 chr17 65881604 65881633 -19556847 + (TG)n Simple_repeat Simple_repeat 2 30 0 2258 106 3 22 chr17 65881633 65881944 -19556536 - AluJb SINE Alu -5 307 3 2421 91 3 3 chr17 65882159 65882467 -19556013 - AluSc SINE Alu -1 308 1 2290 106 0 0 chr17 65882467 65882760 -19555720 - AluY SINE Alu -18 293 1 489 291 42 32 chr17 65882928 65883117 -19555363 - MLT1J LTR MaLR -316 195 5 228 306 128 20 chr17 65883195 65883492 -19554988 + L1M4 LINE L1 4744 5072 -1074 1030 234 29 66 chr17 65883545 65883936 -19554544 + MLT1H LTR MaLR 1 516 -51 243 0 0 0 chr17 65883936 65883963 -19554517 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1030 234 29 66 chr17 65883963 65884008 -19554472 + MLT1H LTR MaLR 516 561 -6 371 185 22 65 chr17 65884015 65884107 -19554373 + L1MC4a LINE L1 5630 5717 -2091 1871 162 0 4 chr17 65884135 65884407 -19554073 - AluJb SINE Alu -32 280 10 592 240 52 4 chr17 65884422 65884606 -19553874 + L1MC4a LINE L1 5706 5901 -220 2339 100 0 3 chr17 65884606 65884906 -19553574 + AluSg SINE Alu 1 299 -11 1842 199 66 29 chr17 65884908 65885361 -19553119 + L1ME3 LINE L1 5685 6154 -8 1286 167 59 70 chr17 65885361 65885631 -19552849 - AluJb SINE Alu -7 305 39 784 188 0 0 chr17 65885633 65885766 -19552714 - FLAM_A SINE Alu 0 133 1 1956 47 0 8 chr17 65886023 65886278 -19552202 - L1PA4 LINE L1 -3 6152 5900 2343 86 3 0 chr17 65886278 65886570 -19551910 - AluY SINE Alu -18 293 1 25 0 0 0 chr17 65887037 65887062 -19551418 + AT_rich Low_complexity Low_complexity 1 25 0 1240 191 90 25 chr17 65887062 65887339 -19551141 + AluJo SINE Alu 3 297 -5 1368 121 14 37 chr17 65887486 65887701 -19550779 + AluJo SINE Alu 1 210 -102 220 347 21 42 chr17 65887988 65888132 -19550348 - L3 LINE CR1 -776 801 661 1123 178 294 27 chr17 65888299 65888636 -19549844 + LTR47A LTR ERVL 1 427 -25 3260 127 99 37 chr17 65889262 65889859 -19548621 + MER51A LTR ERV1 1 634 0 23 0 0 0 chr17 65891124 65891147 -19547333 + AT_rich Low_complexity Low_complexity 1 23 0 2376 87 0 13 chr17 65892363 65892673 -19545807 + AluSg SINE Alu 1 306 -4 427 295 43 36 chr17 65893221 65893360 -19545120 + L2 LINE L2 3172 3311 -2 295 258 0 54 chr17 65898108 65898201 -19540279 - L2 LINE L2 -38 3275 3188 2319 113 0 10 chr17 65898576 65898886 -19539594 + AluSx SINE Alu 1 307 -5 398 306 181 25 chr17 65898898 65899058 -19539422 + L1MC5 LINE L1 7738 7922 -39 330 247 123 4 chr17 65899066 65899309 -19539171 + L1ME4a LINE L1 5775 6080 -41 297 332 95 28 chr17 65899540 65899865 -19538615 + L1ME2 LINE L1 5588 5934 -187 274 259 139 9 chr17 65900221 65900329 -19538151 - MIR3 SINE MIR -17 191 70 291 288 102 42 chr17 65900924 65901042 -19537438 + MIR SINE MIR 118 242 -20 350 276 90 8 chr17 65901049 65901183 -19537297 + L2 LINE L2 3168 3312 -1 303 323 67 18 chr17 65901519 65901683 -19536797 - MIR SINE MIR -70 192 21 1087 239 106 112 chr17 65902413 65903584 -19534896 + L1MC4 LINE L1 6830 7995 -47 677 154 109 0 chr17 65903584 65903694 -19534786 + FLAM_C SINE Alu 2 123 -10 1087 239 106 112 chr17 65903694 65903739 -19534741 + L1MC4 LINE L1 7995 8039 -3 1170 139 12 0 chr17 65903855 65904020 -19534460 + AluSg/x SINE Alu 132 298 -12 414 240 0 10 chr17 65905340 65905444 -19533036 + L1ME2 LINE L1 6035 6137 -27 1739 157 0 11 chr17 65905446 65905707 -19532773 - AluJb SINE Alu -22 290 33 180 0 0 0 chr17 65907360 65907380 -19531100 + (CTG)n Simple_repeat Simple_repeat 3 22 0 393 275 38 15 chr17 65908215 65908346 -19530134 + MIR SINE MIR 49 182 -80 2399 70 0 42 chr17 65908854 65909167 -19529313 - AluY SINE Alu -11 300 1 636 296 40 69 chr17 65909576 65909999 -19528481 - MARNA DNA Mariner -7 579 169 309 218 83 30 chr17 65910520 65910653 -19527827 + L1ME4a LINE L1 5970 6109 -12 479 297 22 22 chr17 65910980 65911162 -19527318 + LTR33 LTR ERVL 5 186 -335 965 128 0 0 chr17 65911357 65911490 -19526990 - FLAM_C SINE Alu 0 133 1 272 307 90 61 chr17 65911503 65911935 -19526545 + L2 LINE L2 2778 3221 -51 193 347 125 0 chr17 65912679 65912751 -19525729 - L2 LINE L2 -7 3265 3185 279 256 81 0 chr17 65913200 65913286 -19525194 + MER5A DNA MER1_type 81 173 -16 229 245 0 0 chr17 65913640 65913693 -19524787 + MER5A DNA MER1_type 63 115 -74 418 198 42 31 chr17 65915123 65915219 -19523261 + MIR SINE MIR 117 213 -49 713 193 0 0 chr17 65917830 65917939 -19520541 - FLAM_A SINE Alu -33 109 1 1634 160 3 58 chr17 65918815 65919128 -19519352 + AluJo SINE Alu 9 304 -8 435 230 79 8 chr17 65919988 65920114 -19518366 + MLT1G LTR MaLR 451 585 -5 302 292 0 11 chr17 65920125 65920214 -19518266 + MLT1H-int LTR MaLR 5 92 -1279 373 297 50 42 chr17 65920259 65920498 -19517982 + MLT1H-int LTR MaLR 320 560 -811 253 252 107 110 chr17 65921078 65921387 -19517093 + MLT1H-int LTR MaLR 1010 1317 -54 590 289 60 17 chr17 65921466 65921714 -19516766 + MLT1H LTR MaLR 59 319 -230 364 189 221 16 chr17 65921723 65921850 -19516630 + MLT1H LTR MaLR 435 587 -3 493 240 118 36 chr17 65922398 65922619 -19515861 - L2 LINE L2 0 3313 3075 183 358 128 17 chr17 65922669 65922848 -19515632 - L2 LINE L2 -131 3141 2943 2229 99 0 30 chr17 65922917 65923221 -19515259 - AluSq SINE Alu -18 295 1 284 388 33 11 chr17 65923240 65923423 -19515057 - L2 LINE L2 -469 2845 2659 1394 190 6 94 chr17 65924504 65924670 -19513810 - AluSq SINE Alu -11 302 123 2219 99 0 23 chr17 65924670 65924974 -19513506 - AluY SINE Alu -14 297 1 2362 101 0 0 chr17 65924984 65925290 -19513190 - AluY SINE Alu -5 306 1 1394 190 6 94 chr17 65925290 65925443 -19513037 - AluSq SINE Alu -199 114 1 213 39 0 0 chr17 65926751 65926777 -19511703 + (A)n Simple_repeat Simple_repeat 1 26 0 1232 133 0 6 chr17 65926931 65927104 -19511376 - AluSg/x SINE Alu -11 301 130 2393 40 7 4 chr17 65928104 65928379 -19510101 - AluY SINE Alu -15 296 21 347 315 110 0 chr17 65928428 65928574 -19509906 + MIR SINE MIR 89 250 -12 298 160 20 0 chr17 65928740 65928790 -19509690 - MER5B DNA MER1_type 0 178 128 2095 253 119 17 chr17 65928790 65929242 -19509238 - L1ME3A LINE L1 -5 6165 5761 2410 65 41 0 chr17 65929242 65929532 -19508948 - AluY SINE Alu -9 302 1 2095 253 119 17 chr17 65929532 65930221 -19508259 - L1ME3A LINE L1 -409 5761 4878 1953 164 0 7 chr17 65930221 65930526 -19507954 + AluJb SINE Alu 1 303 -9 2095 253 119 17 chr17 65930526 65930604 -19507876 - L1ME3A LINE L1 -1292 4878 4809 412 217 94 87 chr17 65930604 65930742 -19507738 + MER5B DNA MER1_type 40 178 0 462 225 104 87 chr17 65930945 65931118 -19507362 + MER5B DNA MER1_type 3 178 0 286 268 105 20 chr17 65932778 65932931 -19505549 + L1ME LINE L1 5547 5712 -409 1911 122 0 0 chr17 65935514 65935769 -19502711 - AluSx SINE Alu -53 259 5 440 285 64 23 chr17 65936030 65936202 -19502278 + L2 LINE L2 3135 3313 0 202 216 0 0 chr17 65936204 65936241 -19502239 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 240 197 0 6 chr17 65936978 65937040 -19501440 + MIR SINE MIR 71 132 -76 2154 124 0 3 chr17 65937629 65937927 -19500553 - AluSg1 SINE Alu -12 297 1 1896 147 0 7 chr17 65939368 65939847 -19498633 + AluSx SINE Alu 1 477 0 1815 156 17 0 chr17 65939905 65940206 -19498274 - AluSx SINE Alu -6 306 1 282 289 82 0 chr17 65940257 65940354 -19498126 + MIR SINE MIR 66 170 -92 218 269 119 45 chr17 65940501 65940568 -19497912 + L3b LINE CR1 1510 1581 -2 409 278 96 11 chr17 65943666 65943853 -19494627 - Charlie8 DNA MER1_type -2141 276 74 366 379 62 4 chr17 65944547 65944774 -19493706 - L3 LINE CR1 -2 1575 1336 615 272 12 18 chr17 65945203 65945372 -19493108 - MER5B DNA MER1_type -10 168 1 1417 163 45 7 chr17 65945521 65945810 -19492670 + L1MB3 LINE L1 5882 6181 -2 1964 123 61 10 chr17 65945820 65946113 -19492367 - AluSx SINE Alu -4 308 1 448 182 25 83 chr17 65946484 65946605 -19491875 - MER81 DNA DNA 0 114 1 241 302 60 0 chr17 65946807 65946923 -19491557 - MIR SINE MIR 0 262 140 1494 160 66 7 chr17 65947018 65947306 -19491174 + AluSg SINE Alu 1 305 -5 2281 113 0 3 chr17 65947518 65947818 -19490662 + AluSx SINE Alu 1 299 -13 1191 159 0 0 chr17 65948228 65948410 -19490070 - AluSg/x SINE Alu -1 311 130 250 341 127 40 chr17 65948731 65948904 -19489576 + L2 LINE L2 3033 3220 -52 1848 159 13 3 chr17 65949087 65949396 -19489084 - AluJb SINE Alu 0 312 1 2042 130 3 3 chr17 65949528 65949820 -19488660 + AluSg1 SINE Alu 1 292 -17 2120 130 10 3 chr17 65950827 65951134 -19487346 + AluSx SINE Alu 1 309 -3 1654 164 23 10 chr17 65952300 65952639 -19485841 - AluSx SINE Alu 0 312 1 1928 136 7 7 chr17 65954078 65954516 -19483964 + AluSx SINE Alu 1 438 0 1784 162 11 0 chr17 65954573 65954893 -19483587 - AluSx SINE Alu 0 323 1 285 278 108 0 chr17 65954924 65955041 -19483439 + MIR SINE MIR 43 170 -58 193 302 47 23 chr17 65955160 65955246 -19483234 + MIR3 SINE MIR 109 196 -12 368 305 96 11 chr17 65958338 65958525 -19479955 - Charlie8 DNA MER1_type -2141 276 74 419 370 62 4 chr17 65959282 65959509 -19478971 - L3 LINE CR1 -2 1575 1336 599 261 12 19 chr17 65959944 65960105 -19478375 - MER5B DNA MER1_type -18 160 1 1382 159 52 14 chr17 65960264 65960553 -19477927 + L1MB3 LINE L1 5882 6181 -2 1942 132 61 10 chr17 65960567 65960862 -19477618 - AluSx SINE Alu -2 310 1 401 148 57 123 chr17 65961234 65961356 -19477124 - MER81 DNA DNA 0 114 1 201 328 34 0 chr17 65961555 65961674 -19476806 - MIR SINE MIR 0 262 140 1497 159 72 4 chr17 65961769 65962045 -19476435 + AluSg SINE Alu 1 295 -15 2366 119 0 0 chr17 65962266 65962578 -19475902 + AluSx SINE Alu 1 312 0 1143 170 0 0 chr17 65963016 65963198 -19475282 - AluSg/x SINE Alu -2 310 129 233 363 115 33 chr17 65963507 65963689 -19474791 + L2 LINE L2 3024 3220 -52 1658 172 10 16 chr17 65963866 65964174 -19474306 - AluJb SINE Alu -1 311 6 1889 129 7 30 chr17 65964310 65964605 -19473875 + AluSg1 SINE Alu 1 288 -21 195 42 0 0 chr17 65965481 65965505 -19472975 + (T)n Simple_repeat Simple_repeat 1 24 0 1974 126 16 10 chr17 65965616 65965926 -19472554 + AluSq SINE Alu 1 312 -1 1960 139 10 16 chr17 65967100 65967410 -19471070 - AluSx SINE Alu -4 308 1 1907 157 3 10 chr17 65968843 65969148 -19469332 + AluSx SINE Alu 1 303 -9 2285 119 0 0 chr17 65969206 65969508 -19468972 - AluSx SINE Alu -10 302 1 297 188 0 31 chr17 65969587 65969651 -19468829 + MIR SINE MIR 101 162 -100 407 99 0 14 chr17 65970005 65970076 -19468404 + (CCCCCA)n Simple_repeat Simple_repeat 3 72 0 1973 106 0 0 chr17 65972441 65972696 -19465784 - AluSx SINE Alu -53 259 5 357 292 54 58 chr17 65972889 65973129 -19465351 + L2 LINE L2 3075 3313 0 200 216 0 0 chr17 65973131 65973168 -19465312 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 2327 76 10 7 chr17 65973187 65973488 -19464992 + AluY SINE Alu 1 302 -9 201 250 0 73 chr17 65974213 65974281 -19464199 + MIR SINE MIR 70 132 -76 1995 134 0 17 chr17 65974869 65975168 -19463312 - AluSg1 SINE Alu -15 294 1 2064 141 6 6 chr17 65976589 65976879 -19461601 + AluSx SINE Alu 1 293 -53 966 130 17 6 chr17 65976879 65977056 -19461424 + GA-rich Low_complexity Low_complexity 2 180 0 2064 141 6 6 chr17 65977056 65977111 -19461369 + AluSx SINE Alu 292 346 0 1655 167 22 4 chr17 65977172 65977490 -19460990 - AluSx SINE Alu 0 323 1 289 239 76 22 chr17 65977542 65977634 -19460846 + MIR SINE MIR 66 162 -100 1408 56 5 30 chr17 65977828 65978026 -19460454 - L1PA3 LINE L1 0 6155 5963 359 305 96 11 chr17 65981156 65981343 -19457137 - Charlie8 DNA MER1_type -2152 265 63 402 370 62 4 chr17 65982100 65982327 -19456153 - L3 LINE CR1 -2 1575 1336 603 278 12 18 chr17 65982751 65982920 -19455560 - MER5B DNA MER1_type -10 168 1 1466 155 45 7 chr17 65983068 65983358 -19455122 + L1MB3 LINE L1 5881 6181 -2 1768 128 85 11 chr17 65983368 65983650 -19454830 - AluSx SINE Alu -9 303 1 431 180 25 90 chr17 65984022 65984144 -19454336 - MER81 DNA DNA 0 114 1 1679 147 67 0 chr17 65984558 65984843 -19453637 + AluSg SINE Alu 2 305 -5 2356 108 0 0 chr17 65985058 65985364 -19453116 + AluSx SINE Alu 7 312 0 1198 144 6 0 chr17 65985797 65985978 -19452502 - AluSg/x SINE Alu -2 310 129 211 288 125 103 chr17 65986300 65986484 -19451996 + L2 LINE L2 3033 3220 -52 2288 84 13 3 chr17 65986502 65986810 -19451670 - AluY SINE Alu 0 311 1 1911 164 6 3 chr17 65986979 65987290 -19451190 - AluJb SINE Alu 0 312 1 2167 111 3 3 chr17 65987422 65987719 -19450761 + AluSg1 SINE Alu 1 297 -12 2134 108 11 0 chr17 65987760 65988069 -19450411 + AluY SINE Alu 1 312 0 2257 128 0 3 chr17 65989039 65989351 -19449129 + AluSx SINE Alu 1 311 -1 2210 117 3 13 chr17 65990388 65990695 -19447785 - AluSc SINE Alu -5 304 1 2260 124 0 6 chr17 65990833 65991147 -19447333 - AluSx SINE Alu 0 312 1 2162 89 7 7 chr17 65993513 65993813 -19444667 + AluSg1 SINE Alu 1 300 0 1821 169 3 14 chr17 65994078 65994374 -19444106 - AluJo SINE Alu -17 295 3 2116 115 10 14 chr17 65994563 65994859 -19443621 + AluSx SINE Alu 11 305 -7 2399 73 0 0 chr17 65995312 65995612 -19442868 + AluSc SINE Alu 1 300 -9 2163 99 7 3 chr17 65995759 65996062 -19442418 + AluSp SINE Alu 1 304 -9 280 357 33 33 chr17 65996299 65996481 -19441999 + MER5A DNA MER1_type 8 189 0 2068 87 33 0 chr17 65996654 65996963 -19441517 - AluSq SINE Alu 0 318 1 2203 102 3 3 chr17 65998009 65998314 -19440166 + AluSx SINE Alu 1 305 -7 256 379 64 16 chr17 65998331 65998582 -19439898 + L2 LINE L2 3032 3294 -19 312 301 137 7 chr17 65998691 65998795 -19439685 + MARNA DNA Mariner 49 179 -407 1695 171 0 32 chr17 65998795 65999110 -19439370 - AluJo SINE Alu -7 305 1 312 301 137 7 chr17 65999110 65999151 -19439329 + MARNA DNA Mariner 179 213 -373 1557 177 3 14 chr17 65999155 65999438 -19439042 + AluJo SINE Alu 1 280 -32 225 0 0 0 chr17 65999438 65999463 -19439017 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 1285 258 99 24 chr17 65999516 65999980 -19438500 - LTR45 LTR ERV1 -35 454 1 2385 63 3 0 chr17 66000157 66000456 -19438024 - AluY SINE Alu -11 300 1 992 211 0 0 chr17 66000460 66000626 -19437854 - FRAM SINE Alu 0 166 1 2001 102 14 7 chr17 66000667 66000961 -19437519 - AluY SINE Alu -15 296 1 21 0 0 0 chr17 66001337 66001358 -19437122 + AT_rich Low_complexity Low_complexity 1 21 0 2127 85 46 0 chr17 66001413 66001695 -19436785 + AluSq SINE Alu 1 295 -18 659 118 118 0 chr17 66002015 66002125 -19436355 + AluJb SINE Alu 149 271 -41 * 770 172 0 0 chr17 66002120 66002236 -19436244 - AluJo/FLAM SINE Alu -195 117 2 1187 122 0 0 chr17 66002425 66002589 -19435891 - AluSg/x SINE Alu -15 295 132 1804 146 30 13 chr17 66002589 66002891 -19435589 - AluSq SINE Alu -6 307 1 569 328 69 8 chr17 66003201 66003448 -19435032 + L3 LINE CR1 1220 1481 -96 867 305 76 23 chr17 66003756 66004189 -19434291 + L2 LINE L2 2029 2484 -830 2252 118 0 0 chr17 66004206 66004519 -19433961 - AluSq SINE Alu 0 313 1 502 179 0 32 chr17 66004522 66004617 -19433863 - FLAM_A SINE Alu -13 129 38 401 223 78 0 chr17 66004646 66004749 -19433731 - Charlie1 DNA MER1_type -1 2760 2650 1814 161 10 0 chr17 66004902 66005200 -19433280 + AluJo SINE Alu 1 301 -11 962 104 0 8 chr17 66005221 66005355 -19433125 + FRAM SINE Alu 35 167 -9 2293 88 0 0 chr17 66005591 66005887 -19432593 + AluSx SINE Alu 2 297 -15 588 300 155 44 chr17 66006322 66006800 -19431680 - L2 LINE L2 -19 3294 2772 1730 150 45 0 chr17 66007151 66007438 -19431042 + AluJo SINE Alu 1 300 -12 2041 133 0 22 chr17 66007461 66007597 -19430883 + AluSx SINE Alu 1 138 -174 2020 112 14 0 chr17 66007597 66007898 -19430582 + AluSx SINE Alu 1 305 0 2041 133 0 22 chr17 66007898 66008076 -19430404 + AluSx SINE Alu 138 310 -2 444 315 103 14 chr17 66008270 66008483 -19429997 - MIR SINE MIR -11 251 20 615 200 100 13 chr17 66008563 66008713 -19429767 + MER103 DNA DNA 2 164 -2 1308 266 99 29 chr17 66008788 66008978 -19429502 + L1ME3A LINE L1 5319 5494 -676 1980 127 7 3 chr17 66008978 66009278 -19429202 + AluSx SINE Alu 1 301 -11 1308 266 99 29 chr17 66009278 66009602 -19428878 + L1ME3A LINE L1 5494 5869 -301 799 195 0 13 chr17 66009774 66009933 -19428547 + FRAM SINE Alu 20 176 0 239 343 50 0 chr17 66009983 66010082 -19428398 + MIR SINE MIR 46 149 -113 270 172 297 0 chr17 66012211 66012275 -19426205 - MIR SINE MIR -148 114 32 2303 109 0 0 chr17 66012343 66012655 -19425825 - AluSx SINE Alu 0 312 1 1826 167 17 0 chr17 66012655 66012943 -19425537 - AluJb SINE Alu -19 293 1 696 228 107 0 chr17 66013004 66013153 -19425327 + FRAM SINE Alu 3 167 -9 1906 161 3 3 chr17 66013410 66013721 -19424759 - AluJb SINE Alu -1 311 1 1293 188 111 7 chr17 66013753 66014024 -19424456 + AluSg SINE Alu 1 299 -11 867 145 0 0 chr17 66014044 66014175 -19424305 + FLAM_C SINE Alu 6 136 -7 2014 123 3 16 chr17 66015038 66015348 -19423132 + AluSg SINE Alu 1 306 -4 485 321 87 7 chr17 66015598 66016129 -19422351 + L1ME LINE L1 4942 5516 -646 1808 107 0 0 chr17 66016565 66016808 -19421672 + AluSx SINE Alu 27 269 -43 1832 111 8 0 chr17 66016907 66017183 -19421297 + AluSx SINE Alu 32 312 0 1768 149 3 42 chr17 66017193 66017337 -19421143 + AluSx SINE Alu 1 128 -184 2324 74 0 23 chr17 66017337 66017647 -19420833 + AluY SINE Alu 1 303 -8 1768 149 3 42 chr17 66017647 66017810 -19420670 + AluSx SINE Alu 128 296 -16 696 174 96 42 chr17 66018952 66019119 -19419361 - MER115 DNA AcHobo -22 671 496 1087 275 25 53 chr17 66019136 66019492 -19418988 - MER115 DNA AcHobo -313 380 35 273 318 91 43 chr17 66019492 66019972 -19418508 - L2 LINE L2 -231 3041 2552 710 275 106 0 chr17 66019985 66020174 -19418306 + MER3 DNA MER1_type 1 209 0 1861 109 0 0 chr17 66023376 66023633 -19414847 - AluSg SINE Alu -45 265 9 355 232 54 30 chr17 66025043 66025211 -19413269 + G-rich Low_complexity Low_complexity 6 177 0 21 36 0 0 chr17 66025573 66025601 -19412879 + GC_rich Low_complexity Low_complexity 1 28 0 201 207 35 0 chr17 66026581 66026639 -19411841 + (CCCTG)n Simple_repeat Simple_repeat 1 60 0 2231 170 113 15 chr17 66032075 66032535 -19405945 - MLT1D LTR MaLR 0 505 1 189 276 183 0 chr17 66035412 66035494 -19402986 - MIR SINE MIR -59 149 52 181 97 97 0 chr17 66037247 66037278 -19401202 - MIR SINE MIR -70 192 159 1069 80 13 2 chr17 66037427 66037665 -19400815 - AluSc SINE Alu -17 292 2 2125 94 0 27 chr17 66037672 66037833 -19400647 - AluSx SINE Alu -18 294 143 2134 98 3 28 chr17 66037833 66038150 -19400330 - AluSg SINE Alu -1 309 1 2125 94 0 27 chr17 66038150 66038285 -19400195 - AluSx SINE Alu -169 143 6 512 284 7 21 chr17 66038367 66038508 -19399972 - MIR SINE MIR -109 153 15 211 181 153 42 chr17 66039519 66039591 -19398889 + MIR SINE MIR 183 262 0 444 261 26 9 chr17 66040262 66040377 -19398103 - MIR SINE MIR -62 146 30 734 161 8 17 chr17 66040583 66040701 -19397779 + FLAM_C SINE Alu 1 117 -16 34 0 0 0 chr17 66040702 66040736 -19397744 + AT_rich Low_complexity Low_complexity 1 34 0 1626 119 86 19 chr17 66041231 66041499 -19396981 - AluJo SINE Alu -24 288 3 2071 229 85 32 chr17 66042443 66043006 -19395474 + MLT1E LTR MaLR 1 593 0 226 204 0 0 chr17 66043154 66043198 -19395282 + FLAM_C SINE Alu 120 163 0 312 55 0 55 chr17 66044245 66044300 -19394180 - FAM SINE Alu -2 177 126 395 329 41 7 chr17 66044409 66044555 -19393925 - MIR SINE MIR -10 252 102 600 174 157 0 chr17 66045339 66045454 -19393026 - FLAM_A SINE Alu 0 133 1 256 119 0 68 chr17 66045531 66045590 -19392890 + L1MC4 LINE L1 6659 6713 -1329 1525 177 49 10 chr17 66045604 66045892 -19392588 + AluJb SINE Alu 1 299 -13 529 135 260 0 chr17 66046161 66046257 -19392223 - FLAM_C SINE Alu -12 121 1 2019 122 3 0 chr17 66046339 66046626 -19391854 - AluSx SINE Alu -22 290 3 264 331 6 14 chr17 66047144 66047283 -19391197 - MIR SINE MIR -70 192 34 668 148 0 9 chr17 66047536 66047644 -19390836 - FRAM SINE Alu -59 117 11 420 262 148 22 chr17 66048094 66048275 -19390205 + MIR SINE MIR 8 204 -58 688 157 0 19 chr17 66050725 66050833 -19387647 + FLAM_C SINE Alu 2 107 -36 1667 128 69 0 chr17 66051042 66051316 -19387164 + AluSx SINE Alu 6 298 -14 245 356 122 10 chr17 66051684 66051889 -19386591 + L2 LINE L2 2841 3068 -204 1307 192 137 19 chr17 66052926 66053233 -19385247 - MER2 DNA MER2_type -1 343 1 257 164 16 49 chr17 66053439 66053500 -19384980 + L3 LINE CR1 1446 1504 -73 718 183 0 0 chr17 66054321 66054436 -19384044 - FLAM_A SINE Alu -18 115 1 1349 47 6 6 chr17 66055303 66055472 -19383008 - AluY SINE Alu -142 169 1 1812 138 50 0 chr17 66055947 66056229 -19382251 + AluSx SINE Alu 1 296 -16 2158 105 3 13 chr17 66056398 66056713 -19381767 + AluSp SINE Alu 1 312 -1 1582 182 0 38 chr17 66056781 66057094 -19381386 + AluJb SINE Alu 1 301 -11 931 234 79 54 chr17 66057219 66057466 -19381014 + MER5C DNA MER1_type 1 259 -65 2347 73 10 0 chr17 66057466 66057768 -19380712 + AluSg SINE Alu 1 305 -5 931 234 79 54 chr17 66057768 66057836 -19380644 + MER5C DNA MER1_type 259 324 0 305 245 29 86 chr17 66057978 66058117 -19380363 + L1ME LINE L1 5711 5841 -280 839 170 0 15 chr17 66058123 66058258 -19380222 + AluJo SINE Alu 2 134 -178 2265 103 0 3 chr17 66058258 66058568 -19379912 + AluSq SINE Alu 1 309 -4 1078 193 42 91 chr17 66059639 66059992 -19378488 - L1MB7 LINE L1 -22 6162 5827 1506 85 20 0 chr17 66060309 66060508 -19377972 + THE1C LTR MaLR 173 375 0 1792 167 0 7 chr17 66060667 66060973 -19377507 - AluSx SINE Alu -8 304 1 1978 130 0 0 chr17 66061053 66061346 -19377134 - AluSx SINE Alu -19 293 1 1406 185 40 20 chr17 66061508 66061805 -19376675 + AluJb SINE Alu 1 303 -9 3514 151 56 30 chr17 66061807 66061902 -19376578 + L1MB7 LINE L1 5433 5524 -660 2257 91 14 115 chr17 66061902 66062249 -19376231 + THE1C LTR MaLR 1 301 -74 1691 138 41 10 chr17 66062249 66062539 -19375941 - AluSg SINE Alu -11 299 1 2257 91 14 115 chr17 66062539 66062608 -19375872 + THE1C LTR MaLR 301 375 0 3514 151 56 30 chr17 66062608 66063125 -19375355 + L1MB7 LINE L1 5524 6070 -114 2030 130 0 7 chr17 66063125 66063425 -19375055 + AluJb SINE Alu 1 298 -14 3514 151 56 30 chr17 66063425 66063544 -19374936 + L1MB7 LINE L1 6070 6184 0 427 295 43 36 chr17 66114318 66114457 -19324023 + L2 LINE L2 3172 3311 -2 295 258 0 54 chr17 66119205 66119298 -19319182 - L2 LINE L2 -38 3275 3188 2303 116 0 10 chr17 66119673 66119983 -19318497 + AluSx SINE Alu 1 307 -5 398 306 181 25 chr17 66119995 66120155 -19318325 + L1MC5 LINE L1 7738 7922 -39 330 247 123 4 chr17 66120163 66120406 -19318074 + L1ME4a LINE L1 5775 6080 -41 274 335 95 28 chr17 66120637 66120962 -19317518 + L1ME2 LINE L1 5588 5934 -187 241 254 136 27 chr17 66121318 66121428 -19317052 - MIR3 SINE MIR -17 191 70 291 288 102 42 chr17 66122023 66122141 -19316339 + MIR SINE MIR 118 242 -20 340 284 90 8 chr17 66122148 66122282 -19316198 + L2 LINE L2 3168 3312 -1 297 311 73 24 chr17 66122618 66122782 -19315698 - MIR SINE MIR -70 192 21 1073 241 105 112 chr17 66123512 66124684 -19313796 + L1MC4 LINE L1 6830 7995 -47 666 164 109 0 chr17 66124684 66124794 -19313686 + FLAM_C SINE Alu 2 123 -10 1073 241 105 112 chr17 66124794 66124839 -19313641 + L1MC4 LINE L1 7995 8039 -3 1170 139 12 0 chr17 66124955 66125120 -19313360 + AluSg/x SINE Alu 134 300 -12 414 240 0 10 chr17 66126442 66126546 -19311934 + L1ME2 LINE L1 6035 6137 -27 1727 157 0 11 chr17 66126548 66126809 -19311671 - AluJb SINE Alu -22 290 33 180 0 0 0 chr17 66128462 66128482 -19309998 + (CTG)n Simple_repeat Simple_repeat 3 22 0 393 275 38 15 chr17 66129317 66129448 -19309032 + MIR SINE MIR 49 182 -80 2452 77 0 0 chr17 66129956 66130253 -19308227 - AluY SINE Alu -14 297 1 636 296 40 69 chr17 66130662 66131085 -19307395 - MARNA DNA Mariner -7 579 169 309 218 83 30 chr17 66131606 66131739 -19306741 + L1ME4a LINE L1 5970 6109 -12 479 297 22 22 chr17 66132066 66132248 -19306232 + LTR33 LTR ERVL 5 186 -335 965 128 0 0 chr17 66132439 66132572 -19305908 - FLAM_C SINE Alu 0 133 1 272 307 90 61 chr17 66132585 66133017 -19305463 + L2 LINE L2 2778 3221 -51 193 347 125 0 chr17 66133761 66133833 -19304647 - L2 LINE L2 -7 3265 3185 279 256 81 0 chr17 66134282 66134368 -19304112 + MER5A DNA MER1_type 81 173 -16 229 245 0 0 chr17 66134722 66134775 -19303705 + MER5A DNA MER1_type 63 115 -74 418 198 42 31 chr17 66136205 66136301 -19302179 + MIR SINE MIR 117 213 -49 713 193 0 0 chr17 66138912 66139021 -19299459 - FLAM_A SINE Alu -33 109 1 1648 160 3 54 chr17 66139897 66140210 -19298270 + AluJo SINE Alu 9 305 -7 435 230 79 8 chr17 66141070 66141196 -19297284 + MLT1G LTR MaLR 451 585 -5 302 292 0 11 chr17 66141207 66141296 -19297184 + MLT1H-int LTR MaLR 5 92 -1279 373 297 50 42 chr17 66141341 66141580 -19296900 + MLT1H-int LTR MaLR 320 560 -811 253 252 107 110 chr17 66142160 66142469 -19296011 + MLT1H-int LTR MaLR 1010 1317 -54 590 289 60 17 chr17 66142548 66142796 -19295684 + MLT1H LTR MaLR 59 319 -230 364 189 221 16 chr17 66142805 66142932 -19295548 + MLT1H LTR MaLR 435 587 -3 493 240 118 36 chr17 66143480 66143701 -19294779 - L2 LINE L2 0 3313 3075 183 358 128 17 chr17 66143751 66143930 -19294550 - L2 LINE L2 -131 3141 2943 2229 99 0 30 chr17 66143999 66144303 -19294177 - AluSq SINE Alu -18 295 1 284 388 33 11 chr17 66144322 66144505 -19293975 - L2 LINE L2 -469 2845 2659 1385 191 6 94 chr17 66145586 66145751 -19292729 - AluSq SINE Alu -12 301 123 2182 95 3 33 chr17 66145751 66146057 -19292423 - AluY SINE Alu -14 297 1 2382 98 0 0 chr17 66146067 66146373 -19292107 - AluY SINE Alu -5 306 1 1385 191 6 94 chr17 66146373 66146526 -19291954 - AluSq SINE Alu -199 114 1 231 36 0 0 chr17 66147834 66147862 -19290618 + (A)n Simple_repeat Simple_repeat 1 28 0 1214 133 0 6 chr17 66148016 66148189 -19290291 - AluSg/x SINE Alu -11 301 130 2377 40 7 4 chr17 66149189 66149463 -19289017 - AluY SINE Alu -16 295 21 278 315 110 0 chr17 66149512 66149658 -19288822 + MIR SINE MIR 89 250 -12 274 160 20 0 chr17 66149824 66149874 -19288606 - MER5B DNA MER1_type 0 178 128 2177 257 107 19 chr17 66149874 66150326 -19288154 - L1ME3A LINE L1 -5 6165 5754 2398 65 41 0 chr17 66150326 66150616 -19287864 - AluY SINE Alu -9 302 1 2177 257 107 19 chr17 66150616 66151305 -19287175 - L1ME3A LINE L1 -416 5754 4883 1918 160 0 7 chr17 66151305 66151605 -19286875 + AluJb SINE Alu 1 298 -14 2177 257 107 19 chr17 66151605 66151688 -19286792 - L1ME3A LINE L1 -1287 4883 4809 366 225 94 87 chr17 66151688 66151826 -19286654 + MER5B DNA MER1_type 40 178 0 387 243 92 75 chr17 66152029 66152202 -19286278 + MER5B DNA MER1_type 3 178 0 302 248 242 35 chr17 66153862 66154176 -19284304 + L1ME4a LINE L1 5547 5925 -196 246 254 57 78 chr17 66155659 66155852 -19282628 + L1MC5 LINE L1 7743 7931 -30 574 253 0 41 chr17 66157000 66157170 -19281310 + MIR SINE MIR 28 190 -72 805 232 164 33 chr17 66157207 66157735 -19280745 + L2 LINE L2 2688 3308 -5 2752 130 26 0 chr17 66157754 66158170 -19280310 - MSTB1 LTR MaLR 0 432 6 1838 225 59 58 chr17 66158750 66159221 -19279259 - L1ME2 LINE L1 -34 6130 5656 2219 106 3 0 chr17 66159221 66159514 -19278966 - AluSg SINE Alu -3 307 14 1838 225 59 58 chr17 66159514 66159651 -19278829 - L1ME2 LINE L1 -508 5656 5521 368 218 20 20 chr17 66160189 66160290 -19278190 + L1MC5 LINE L1 7831 7931 -30 2541 78 0 0 chr17 66161621 66161929 -19276551 + AluY SINE Alu 1 308 -3 1535 138 17 0 chr17 66161942 66162174 -19276306 + MER46A DNA MER2_type 1 236 0 336 315 21 14 chr17 66163351 66163494 -19274986 + L1MC5 LINE L1 7786 7929 -32 230 150 0 0 chr17 66164423 66164463 -19274017 - MER5C DNA MER1_type 0 324 285 219 213 0 21 chr17 66165032 66165079 -19273401 + L2 LINE L2 3226 3271 -42 270 286 38 9 chr17 66165890 66165995 -19272485 + L2 LINE L2 2577 2684 -630 1217 224 98 15 chr17 66166129 66166464 -19272016 - MLT1C LTR MaLR -68 399 37 1782 157 20 14 chr17 66166464 66166758 -19271722 - AluJo SINE Alu -16 296 1 963 242 65 22 chr17 66166887 66167242 -19271238 + L1M4 LINE L1 2218 2587 -3559 2108 106 7 7 chr17 66167302 66167619 -19270861 - AluSx SINE Alu 0 312 1 361 136 0 0 chr17 66167643 66167702 -19270778 - MER20 DNA MER1_type -35 184 126 741 139 0 0 chr17 66167703 66167811 -19270669 + AluJb SINE Alu 2 109 -203 318 26 0 0 chr17 66168016 66168055 -19270425 + (TTA)n Simple_repeat Simple_repeat 1 39 0 2135 117 0 3 chr17 66168055 66168337 -19270143 - AluSq SINE Alu -32 281 1 184 214 36 18 chr17 66168413 66168469 -19270011 + L2 LINE L2 3216 3272 0 350 90 64 8 chr17 66168525 66168622 -19269858 + Alu SINE Alu 1 53 -250 940 189 86 57 chr17 66168722 66168966 -19269514 - MLT1A2 LTR MaLR -123 251 1 214 244 183 0 chr17 66168967 66169049 -19269431 + L2 LINE L2 2713 2809 -505 1090 258 120 8 chr17 66169050 66169418 -19269062 + MER20B DNA MER1_type 1 409 -374 310 183 99 35 chr17 66169512 66169654 -19268826 + MER20B DNA MER1_type 560 710 -73 543 269 123 46 chr17 66169723 66170113 -19268367 + L2 LINE L2 2852 3271 -42 1882 143 37 0 chr17 66170333 66170631 -19267849 + AluSx SINE Alu 1 308 0 3489 118 15 44 chr17 66171265 66171808 -19266672 + MER1A DNA MER1_type 1 527 0 226 156 322 0 chr17 66173514 66173604 -19264876 - MIR SINE MIR -57 151 33 26 0 0 0 chr17 66173988 66174014 -19264466 + AT_rich Low_complexity Low_complexity 1 26 0 512 265 149 22 chr17 66174087 66174442 -19264038 + L1ME4a LINE L1 5523 5922 -199 2082 116 0 38 chr17 66175665 66175984 -19262496 + AluSx SINE Alu 1 308 0 445 132 0 0 chr17 66176181 66176249 -19262231 + MLT1K LTR MaLR 510 577 -11 2179 113 0 16 chr17 66176299 66176608 -19261872 + AluSx SINE Alu 1 304 -8 2148 114 0 20 chr17 66177174 66177473 -19261007 + AluSx SINE Alu 1 293 -19 2412 90 0 3 chr17 66178390 66178691 -19259789 + AluSx SINE Alu 1 300 -12 1555 202 3 14 chr17 66179135 66179452 -19259028 + AluJo SINE Alu 3 316 0 2267 107 0 0 chr17 66179713 66180004 -19258476 + AluSx SINE Alu 1 291 -21 1483 185 43 4 chr17 66180295 66180571 -19257909 - AluJo SINE Alu -11 301 15 25 0 0 0 chr17 66180571 66180596 -19257884 + AT_rich Low_complexity Low_complexity 1 25 0 2181 87 40 17 chr17 66180860 66181159 -19257321 + AluSq SINE Alu 1 306 -7 441 0 0 0 chr17 66181891 66181940 -19256540 + (CA)n Simple_repeat Simple_repeat 2 50 0 1935 125 14 14 chr17 66182493 66182782 -19255698 - AluJo SINE Alu -9 303 15 2371 101 0 3 chr17 66184016 66184324 -19254156 + AluSq SINE Alu 1 307 -6 659 257 38 0 chr17 66184818 66185001 -19253479 - MIR3 SINE MIR -17 191 2 1667 94 0 0 chr17 66185392 66185626 -19252854 - L1MA8 LINE L1 -3 6288 6055 23 0 0 0 chr17 66186301 66186324 -19252156 + AT_rich Low_complexity Low_complexity 1 23 0 546 118 0 0 chr17 66186335 66186420 -19252060 - L1MA8 LINE L1 -3 6288 6204 2412 94 0 3 chr17 66186533 66186832 -19251648 - AluSq SINE Alu -15 298 1 21 0 0 0 chr17 66187033 66187054 -19251426 + AT_rich Low_complexity Low_complexity 1 21 0 2111 149 0 0 chr17 66187261 66187570 -19250910 + AluSx SINE Alu 1 309 -3 364 180 56 11 chr17 66187764 66187853 -19250627 + MIR SINE MIR 88 180 -82 639 206 156 0 chr17 66187855 66187996 -19250484 + MER21A LTR ERV1 416 578 -353 1187 110 0 0 chr17 66188690 66188845 -19249635 - AluSg/x SINE Alu -17 293 139 2274 75 0 4 chr17 66188857 66189155 -19249325 - AluSg1 SINE Alu 0 299 3 245 236 42 14 chr17 66189281 66189353 -19249127 + MIR SINE MIR 189 262 0 * 424 360 106 14 chr17 66189348 66189765 -19248715 - L2 LINE L2 -32 3281 2827 219 36 0 0 chr17 66191830 66191858 -19246622 + (CA)n Simple_repeat Simple_repeat 2 29 0 2190 94 0 52 chr17 66191998 66192326 -19246154 + AluY SINE Alu 1 311 0 2244 131 0 0 chr17 66192336 66192648 -19245832 + AluSx SINE Alu 1 312 0 488 257 54 68 chr17 66192953 66193175 -19245305 + L2 LINE L2 3095 3313 0 338 278 62 0 chr17 66193357 66193454 -19245026 - MIR3 SINE MIR -41 167 65 186 103 0 0 chr17 66194311 66194340 -19244140 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 2481 74 0 10 chr17 66194552 66194862 -19243618 - AluSq SINE Alu -1 312 6 185 163 93 0 chr17 66195052 66195095 -19243385 - MER5B DNA MER1_type -8 170 124 760 139 16 16 chr17 66195109 66195231 -19243249 - AluJb SINE Alu -189 123 2 373 256 72 8 chr17 66195246 66195371 -19243109 - MER5B DNA MER1_type -45 133 1 207 273 36 109 chr17 66196100 66196210 -19242270 - L2 LINE L2 -8 3264 3163 2217 99 17 0 chr17 66196669 66196962 -19241518 - AluSg SINE Alu -12 298 1 229 313 94 21 chr17 66197319 66197415 -19241065 + MIR SINE MIR 35 137 -71 805 248 67 4 chr17 66197642 66197880 -19240600 - MARNA DNA Mariner -100 486 234 321 279 57 79 chr17 66198804 66198944 -19239536 + L1ME4a LINE L1 5602 5738 -383 320 191 87 52 chr17 66198961 66199076 -19239404 + L1ME4a LINE L1 5718 5836 -285 4497 158 6 22 chr17 66199183 66199546 -19238934 + L1MB8 LINE L1 5403 5770 -408 2360 118 19 25 chr17 66199546 66199912 -19238568 + THE1B LTR MaLR 1 364 0 4497 158 6 22 chr17 66199912 66200335 -19238145 + L1MB8 LINE L1 5770 6177 -1 236 256 7 58 chr17 66200331 66200468 -19238012 + L1ME4a LINE L1 5991 6120 -1 * 2156 117 0 0 chr17 66200657 66200964 -19237516 - AluSx SINE Alu -5 307 1 2378 72 0 10 chr17 66202647 66202953 -19235527 + AluSq SINE Alu 1 303 -10 1982 91 23 52 chr17 66203179 66203486 -19234994 - AluSx SINE Alu -14 298 1 24 53 0 0 chr17 66204736 66204774 -19233706 + GC_rich Low_complexity Low_complexity 1 38 0 207 69 0 0 chr17 66205162 66205191 -19233289 + (CAG)n Simple_repeat Simple_repeat 3 31 0 276 220 45 38 chr17 66205376 66205508 -19232972 + G-rich Low_complexity Low_complexity 3 135 0 184 286 0 0 chr17 66206284 66206319 -19232161 - L2 LINE L2 -182 3090 3056 638 158 108 0 chr17 66206819 66206939 -19231541 - FLAM_A SINE Alu 0 133 1 2222 76 13 3 chr17 66207346 66207650 -19230830 - AluSq SINE Alu -6 307 1 1695 143 26 46 chr17 66208170 66208477 -19230003 + AluJo SINE Alu 1 301 -11 2186 95 0 19 chr17 66208477 66208791 -19229689 + AluSg SINE Alu 1 309 -1 1578 167 11 7 chr17 66209340 66209653 -19228827 + AluJb SINE Alu 1 314 0 1311 163 3 113 chr17 66210635 66210917 -19227563 - AluJb SINE Alu -17 285 40 2311 83 0 0 chr17 66210917 66211218 -19227262 + AluSg SINE Alu 1 301 -9 1311 163 3 113 chr17 66211218 66211255 -19227225 - AluJb SINE Alu -262 40 1 22 0 0 0 chr17 66211345 66211367 -19227113 + AT_rich Low_complexity Low_complexity 1 22 0 2605 201 70 80 chr17 66211625 66212430 -19226050 + L1M4 LINE L1 4247 5058 -1088 2082 97 0 4 chr17 66212430 66212709 -19225771 + AluSc SINE Alu 4 281 -28 204 0 83 0 chr17 66212709 66212745 -19225735 + (TTAAA)n Simple_repeat Simple_repeat 2 40 0 2605 201 70 80 chr17 66212745 66212905 -19225575 + L1M4 LINE L1 5056 5204 -942 2266 91 3 0 chr17 66212905 66213212 -19225268 + AluSx SINE Alu 1 308 -4 2101 108 7 0 chr17 66213235 66213532 -19224948 + AluSg SINE Alu 1 299 -11 296 216 0 0 chr17 66213532 66213583 -19224897 - L1MC/D LINE L1 -806 5538 5488 23 0 0 0 chr17 66213694 66213717 -19224763 + AT_rich Low_complexity Low_complexity 1 23 0 2250 78 10 0 chr17 66213941 66214235 -19224245 - AluSg SINE Alu -13 297 1 241 305 116 6 chr17 66214761 66214882 -19223598 - MIR SINE MIR -80 128 17 987 101 0 14 chr17 66218803 66218941 -19219539 + AluSq/x SINE Alu 1 136 -177 2355 90 0 3 chr17 66218941 66219253 -19219227 + AluY SINE Alu 1 311 0 253 311 74 8 chr17 66219628 66219750 -19218730 + L2 LINE L2 3142 3271 -1 314 284 37 80 chr17 66220586 66220748 -19217732 - HAL1b LINE L1 0 1348 1194 289 219 187 26 chr17 66220895 66221030 -19217450 - MER5C DNA MER1_type -57 267 2 331 122 96 96 chr17 66221164 66221279 -19217201 + L1ME4a LINE L1 5990 6104 -17 357 196 93 31 chr17 66221616 66221713 -19216767 + MER5B DNA MER1_type 72 174 -4 390 258 68 30 chr17 66221812 66221944 -19216536 + MIR SINE MIR 126 262 0 1119 171 25 20 chr17 66222550 66222749 -19215731 - MER20 DNA MER1_type -18 201 2 1329 133 0 22 chr17 66223037 66223262 -19215218 + AluJo SINE Alu 87 306 -6 720 272 170 24 chr17 66226516 66227023 -19211457 + MARNA DNA Mariner 6 586 0 22 0 0 0 chr17 66229412 66229434 -19209046 + AT_rich Low_complexity Low_complexity 1 22 0 1531 158 7 55 chr17 66232435 66232745 -19205735 - AluJb SINE Alu -17 295 1 1866 127 62 0 chr17 66233461 66233753 -19204727 + AluSx SINE Alu 1 310 -2 571 304 73 5 chr17 66235510 66235730 -19202750 - MIR SINE MIR -6 256 22 381 136 32 136 chr17 66235935 66236060 -19202420 + L1ME4a LINE L1 5964 6075 -46 216 0 0 0 chr17 66236579 66236603 -19201877 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 566 233 109 89 chr17 66236723 66236842 -19201638 - MIR SINE MIR -5 257 142 2122 115 0 0 chr17 66236842 66237138 -19201342 + AluSq SINE Alu 1 296 -17 566 233 109 89 chr17 66237138 66237256 -19201224 - MIR SINE MIR -120 142 15 332 82 14 0 chr17 66238208 66238268 -19200212 - Alu SINE Alu -3 305 259 280 30 0 0 chr17 66238252 66238285 -19200195 - AluSg/x SINE Alu -114 188 156 * 2056 139 0 0 chr17 66238341 66238644 -19199836 - AluSx SINE Alu -9 303 1 181 182 0 0 chr17 66239571 66239604 -19198876 - L2 LINE L2 -5 3267 3235 2375 80 0 6 chr17 66239928 66240240 -19198240 - AluSq SINE Alu -3 310 1 693 284 101 16 chr17 66240615 66240921 -19197559 - L2 LINE L2 -2 3311 2980 1911 147 3 6 chr17 66241002 66241315 -19197165 + AluSx SINE Alu 1 312 0 2286 80 3 0 chr17 66241378 66241678 -19196802 + AluY SINE Alu 1 301 -10 1118 221 224 28 chr17 66241698 66242132 -19196348 + LTR33 LTR ERVL 3 521 0 300 368 39 35 chr17 66242186 66242417 -19196063 - L1 LINE L1 -1040 5106 4875 230 216 0 0 chr17 66242465 66242516 -19195964 - L1 LINE L1 -1361 4785 4735 1672 164 13 10 chr17 66243149 66243448 -19195032 - AluJo SINE Alu -10 302 3 765 195 61 6 chr17 66244883 66245047 -19193433 - FRAM SINE Alu -4 172 1 449 225 155 4 chr17 66247239 66247370 -19191110 - MER5B DNA MER1_type -26 163 3 1494 121 22 9 chr17 66248385 66248616 -19189864 + LTR12 LTR ERV1 1 234 -480 334 134 45 0 chr17 66248666 66248733 -19189747 + LTR12 LTR ERV1 219 288 -426 315 264 11 0 chr17 66248733 66248824 -19189656 + LTR30 LTR ERV1 552 643 -79 659 157 0 0 chr17 66248825 66248927 -19189553 + LTR12 LTR ERV1 481 582 -132 301 207 24 142 chr17 66250363 66250501 -19187979 - L1ME4a LINE L1 -81 6040 5924 2277 112 7 0 chr17 66250501 66250804 -19187676 + AluSc SINE Alu 1 305 -4 301 207 24 142 chr17 66250804 66250834 -19187646 - L1ME4a LINE L1 -197 5924 5892 207 0 0 0 chr17 66250958 66250981 -19187499 + (A)n Simple_repeat Simple_repeat 1 23 0 2000 118 10 10 chr17 66251008 66251305 -19187175 - AluSp SINE Alu -16 297 1 3292 142 26 93 chr17 66251322 66251380 -19187100 - L1MB8 LINE L1 0 6178 6118 3158 155 47 7 chr17 66251380 66251972 -19186508 + L1MB3 LINE L1 5559 6174 -9 3292 142 26 93 chr17 66251972 66252389 -19186091 - L1MB8 LINE L1 -60 6118 5675 2104 142 0 0 chr17 66252389 66252691 -19185789 - AluSx SINE Alu -6 306 5 3292 142 26 93 chr17 66252691 66252912 -19185568 - L1MB8 LINE L1 -503 5675 5532 2110 141 0 3 chr17 66252912 66253217 -19185263 - AluSx SINE Alu -8 304 1 3292 142 26 93 chr17 66253217 66253273 -19185207 - L1MB8 LINE L1 -646 5532 5474 835 144 0 36 chr17 66253284 66253423 -19185057 - AluJb SINE Alu -178 134 1 2548 164 18 53 chr17 66253427 66253595 -19184885 - L1MB8 LINE L1 -688 5486 5314 1821 166 10 20 chr17 66253595 66253891 -19184589 - AluJb SINE Alu -19 293 1 2548 164 18 53 chr17 66253891 66254367 -19184113 - L1MB8 LINE L1 -860 5314 4861 23 0 0 0 chr17 66254374 66254397 -19184083 + AT_rich Low_complexity Low_complexity 1 23 0 404 113 0 0 chr17 66255059 66255121 -19183359 + Alu SINE Alu 237 298 -13 2101 117 7 0 chr17 66255131 66255422 -19183058 + AluSq SINE Alu 1 293 -20 2084 117 0 30 chr17 66256024 66256324 -19182156 + AluJb SINE Alu 1 291 -21 328 301 71 58 chr17 66256462 66256651 -19181829 + MIR SINE MIR 37 228 -34 692 259 229 37 chr17 66256845 66257387 -19181093 + L2 LINE L2 2429 3133 -180 210 37 0 0 chr17 66257387 66257414 -19181066 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 692 259 229 37 chr17 66257414 66257584 -19180896 + L2 LINE L2 3133 3269 -44 2593 60 0 0 chr17 66258024 66258322 -19180158 + AluY SINE Alu 1 298 -13 343 330 63 19 chr17 66258832 66259063 -19179417 - L2 LINE L2 -242 3030 2791 2221 121 0 9 chr17 66259189 66259504 -19178976 + AluSx SINE Alu 1 312 0 618 121 0 0 chr17 66259786 66259877 -19178603 + L1MD3 LINE L1 7742 7832 -163 190 218 141 0 chr17 66260215 66260293 -19178187 + MER5A DNA MER1_type 21 109 -80 1575 144 21 55 chr17 66260949 66261024 -19177456 - MER33 DNA MER1_type -2269 316 240 2368 109 3 3 chr17 66261024 66261337 -19177143 + AluSq SINE Alu 1 313 0 1575 144 21 55 chr17 66261337 66261588 -19176892 - MER33 DNA MER1_type -2345 240 1 1941 181 90 9 chr17 66261664 66262096 -19176384 + MLT1C LTR MaLR 1 467 0 201 39 0 0 chr17 66262953 66262979 -19175501 + (TTCC)n Simple_repeat Simple_repeat 4 29 0 430 226 182 13 chr17 66264099 66264258 -19174222 + MER5A DNA MER1_type 4 189 0 1671 241 114 26 chr17 66266224 66266320 -19172160 - L1M4 LINE L1 -2260 3886 3800 747 256 54 39 chr17 66266320 66266523 -19171957 - MER63A DNA MER1_type -3 207 2 1671 241 114 26 chr17 66266523 66267011 -19171469 - L1M4 LINE L1 -2346 3800 3250 240 143 0 0 chr17 66267011 66267053 -19171427 + (TATG)n Simple_repeat Simple_repeat 2 43 0 1643 192 0 18 chr17 66267063 66267349 -19171131 - AluJo SINE Alu -27 285 5 1240 183 141 6 chr17 66267359 66267692 -19170788 - L1M4 LINE L1 -3124 3022 2645 2389 97 0 0 chr17 66268721 66269021 -19169459 - AluSx SINE Alu -7 305 6 1290 176 50 11 chr17 66269030 66269309 -19169171 - MER33 DNA MER1_type -34 290 1 187 340 57 19 chr17 66270641 66270747 -19167733 + MIR SINE MIR 32 141 -67 358 191 87 43 chr17 66270990 66271105 -19167375 - MIR SINE MIR -56 152 33 233 328 179 25 chr17 66271137 66271338 -19167142 + L2 LINE L2 2973 3204 -68 227 205 205 24 chr17 66273638 66273804 -19164676 - Charlie7 DNA MER1_type -13 2599 2404 * 582 225 40 20 chr17 66273794 66273945 -19164535 - Charlie7 DNA MER1_type -1889 723 570 365 208 0 85 chr17 66274379 66274509 -19163971 + L1MC5 LINE L1 7817 7935 -26 1054 114 0 0 chr17 66274656 66274796 -19163684 + AluSg/x SINE Alu 133 272 -40 228 35 0 0 chr17 66274799 66274828 -19163652 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2308 96 3 13 chr17 66276040 66276353 -19162127 - AluSq SINE Alu -3 310 1 2506 63 7 3 chr17 66277220 66277523 -19160957 - AluY SINE Alu -7 304 1 1907 144 16 16 chr17 66277716 66278028 -19160452 - AluJb SINE Alu 0 312 1 1951 163 0 7 chr17 66278115 66278416 -19160064 - AluJo SINE Alu -13 299 1 344 331 73 0 chr17 66278518 66278642 -19159838 - L2 LINE L2 -3 3269 3137 434 180 118 50 chr17 66279162 66279323 -19159157 + MIR SINE MIR 63 234 -28 225 0 0 0 chr17 66280126 66280151 -19158329 + (T)n Simple_repeat Simple_repeat 1 25 0 2211 106 3 0 chr17 66280443 66280752 -19157728 - AluSx SINE Alu 0 310 1 214 281 96 37 chr17 66280752 66280887 -19157593 + MIR SINE MIR 66 208 -54 1086 189 122 42 chr17 66280947 66281233 -19157247 - MER2 DNA MER2_type -25 320 12 795 155 0 0 chr17 66281356 66281472 -19157008 + FLAM_C SINE Alu 1 116 -17 222 37 0 0 chr17 66283556 66283583 -19154897 + (TCC)n Simple_repeat Simple_repeat 2 28 0 310 323 88 21 chr17 66285012 66285204 -19153276 + MIR3 SINE MIR 3 207 -1 300 224 30 0 chr17 66286567 66286634 -19151846 + MIR3 SINE MIR 113 181 -27 928 195 0 0 chr17 66287591 66287750 -19150730 + AluSg/x SINE Alu 135 293 -17 1855 100 0 0 chr17 66287898 66288139 -19150341 - AluSg/x SINE Alu 0 310 70 1086 189 122 42 chr17 66288393 66288679 -19149801 + MER2 DNA MER2_type 12 320 -25 214 281 96 37 chr17 66288739 66288874 -19149606 - MIR SINE MIR -54 208 66 2212 106 3 0 chr17 66288874 66289183 -19149297 + AluSx SINE Alu 1 310 0 207 0 0 0 chr17 66289476 66289499 -19148981 + (A)n Simple_repeat Simple_repeat 1 23 0 2125 143 0 0 chr17 66289870 66290178 -19148302 - AluSx SINE Alu -4 308 1 2125 118 38 0 chr17 66291565 66291854 -19146626 + AluSx SINE Alu 1 300 -12 2872 148 21 14 chr17 66292150 66292636 -19145844 - MER50 LTR ERV1 -245 489 1 207 341 42 79 chr17 66292997 66293402 -19145078 + L2 LINE L2 2878 3267 -5 977 187 30 10 chr17 66293428 66293626 -19144854 - MER20 DNA MER1_type 0 219 18 1872 140 0 11 chr17 66294101 66294408 -19144072 + AluJb SINE Alu 1 304 0 356 329 87 50 chr17 66294921 66295243 -19143237 + L1MEd LINE L1 480 813 -5306 2050 135 0 0 chr17 66295294 66295622 -19142858 + AluSx SINE Alu 3 330 0 1137 177 173 19 chr17 66295915 66296175 -19142305 + MLT1D LTR MaLR 21 320 -185 5016 124 76 19 chr17 66296175 66296251 -19142229 + L1MB2 LINE L1 5222 5292 -879 6555 82 15 2 chr17 66296251 66297430 -19141050 + L1PA10 LINE L1 4969 6157 -11 5016 124 76 19 chr17 66297430 66298251 -19140229 + L1MB2 LINE L1 5292 6169 -2 2377 95 3 0 chr17 66298307 66298612 -19139868 + AluSc SINE Alu 1 306 -3 423 181 21 32 chr17 66298614 66298708 -19139772 + AluJo SINE Alu 42 134 -178 183 129 0 0 chr17 66299426 66299457 -19139023 + (T)n Simple_repeat Simple_repeat 1 31 0 1500 107 0 5 chr17 66299782 66299997 -19138483 - AluSq SINE Alu -11 302 89 823 158 0 22 chr17 66301239 66301378 -19137102 + FLAM_C SINE Alu 2 137 -6 2125 132 0 0 chr17 66301776 66302086 -19136394 - AluSx SINE Alu -2 310 1 350 222 19 10 chr17 66302358 66302469 -19136011 - L1MD3 LINE L1 -1 8040 6268 230 205 111 34 chr17 66302655 66302772 -19135708 + L1P4 LINE L1 5329 5454 -712 34 0 0 0 chr17 66302921 66302955 -19135525 + AT_rich Low_complexity Low_complexity 1 34 0 2243 90 0 0 chr17 66303014 66303313 -19135167 + AluSc SINE Alu 1 299 -10 409 294 86 24 chr17 66303773 66303960 -19134520 + MIR SINE MIR 55 252 -10 270 224 139 81 chr17 66303968 66304191 -19134289 - L1ME LINE L1 -257 5864 5629 3602 113 10 2 chr17 66304315 66304810 -19133670 - MER1A DNA MER1_type -30 499 1 440 291 191 30 chr17 66304912 66304998 -19133482 - L1MD3 LINE L1 -334 5787 5716 378 0 0 0 chr17 66304998 66305040 -19133440 + (CA)n Simple_repeat Simple_repeat 2 43 0 440 291 191 30 chr17 66305040 66305461 -19133019 - L1MD3 LINE L1 -405 5716 5322 420 269 54 24 chr17 66305479 66305646 -19132834 - L1MD3 LINE L1 -869 5277 5106 263 305 0 0 chr17 66306176 66306235 -19132245 + (TG)n Simple_repeat Simple_repeat 2 60 0 301 271 37 37 chr17 66306765 66306872 -19131608 + MIR3 SINE MIR 102 208 0 554 262 64 43 chr17 66307767 66307954 -19130526 + MIR SINE MIR 15 205 -57 2220 98 0 3 chr17 66309360 66309665 -19128815 + AluSg SINE Alu 1 304 -6 193 193 55 138 chr17 66310683 66310792 -19127688 + MIR SINE MIR 131 230 -32 449 238 145 34 chr17 66311153 66311388 -19127092 - MIR SINE MIR 0 262 2 750 200 135 10 chr17 66312161 66312361 -19126119 - MER2 DNA MER2_type 0 345 121 1411 113 117 8 chr17 66312372 66312611 -19125869 + AluJo SINE Alu 24 288 -24 826 207 33 0 chr17 66312612 66312762 -19125718 - MER2 DNA MER2_type -189 156 2 865 311 102 37 chr17 66313172 66313906 -19124574 - L2 LINE L2 -244 3069 2286 2101 110 3 0 chr17 66314088 66314388 -19124092 + AluSg SINE Alu 1 301 -9 2461 102 47 8 chr17 66314519 66314880 -19123600 - THE1C LTR MaLR 0 375 1 446 271 164 6 chr17 66315026 66315203 -19123277 - MIR SINE MIR -6 256 52 2314 100 0 0 chr17 66315662 66315973 -19122507 + AluSx SINE Alu 1 311 -1 279 0 0 0 chr17 66316302 66316333 -19122147 + (TG)n Simple_repeat Simple_repeat 2 32 0 434 273 109 48 chr17 66316567 66316732 -19121748 + MIR SINE MIR 20 194 -68 486 250 204 35 chr17 66317606 66317710 -19120770 + L2 LINE L2 3010 3095 -218 1730 155 10 7 chr17 66317710 66318001 -19120479 - AluJo SINE Alu -20 292 1 486 250 204 35 chr17 66318001 66318156 -19120324 + L2 LINE L2 3095 3313 0 792 165 8 8 chr17 66318872 66319000 -19119480 + AluJo/FLAM SINE Alu 1 129 -169 2334 78 0 0 chr17 66319000 66319295 -19119185 - AluSg SINE Alu -15 295 1 2314 91 0 0 chr17 66319877 66320175 -19118305 - AluSg SINE Alu -12 298 1 2010 105 7 3 chr17 66322327 66322613 -19115867 - AluSg SINE Alu -23 287 1 2076 100 29 26 chr17 66323056 66323365 -19115115 + AluSx SINE Alu 1 310 -2 1980 133 0 0 chr17 66324834 66325128 -19113352 + AluSx SINE Alu 14 307 -5 1797 140 10 32 chr17 66326749 66327057 -19111423 - AluJb SINE Alu -9 303 3 1466 134 34 45 chr17 66328416 66328684 -19109796 - AluJo SINE Alu -47 265 1 560 327 65 48 chr17 66328753 66329216 -19109264 - L2 LINE L2 -1 3312 2706 1581 129 22 88 chr17 66329216 66329533 -19108947 - AluJo SINE Alu -16 296 1 560 327 65 48 chr17 66329533 66329782 -19108698 - L2 LINE L2 -607 2706 2463 379 224 80 72 chr17 66330490 66330615 -19107865 - MER3 DNA MER1_type 0 209 84 1512 192 3 13 chr17 66330926 66331233 -19107247 - AluJo SINE Alu -8 304 1 270 241 45 45 chr17 66331530 66331642 -19106838 + L1MC5 LINE L1 7798 7909 -52 216 184 53 11 chr17 66332357 66332428 -19106052 - MIR SINE MIR -50 158 87 504 243 64 101 chr17 66332636 66332854 -19105626 + L2 LINE L2 3098 3307 -6 2834 191 50 16 chr17 66333480 66333982 -19104498 + Tigger7 DNA MER2_type 2 485 -2102 2112 111 3 3 chr17 66333982 66334280 -19104200 - AluSx SINE Alu -14 298 1 2834 191 50 16 chr17 66334280 66334428 -19104052 + Tigger7 DNA MER2_type 485 2547 -40 607 229 141 26 chr17 66334438 66334630 -19103850 + MIR SINE MIR 46 259 -3 2069 86 43 0 chr17 66334832 66335112 -19103368 - AluSx SINE Alu -16 296 5 182 275 29 58 chr17 66335251 66335320 -19103160 - MIR3 SINE MIR -141 67 1 317 247 70 44 chr17 66335877 66336035 -19102445 - MER104 DNA Tc2 -14 166 5 405 200 64 36 chr17 66336040 66336150 -19102330 - MIR SINE MIR -111 151 39 653 231 0 8 chr17 66336408 66336538 -19101942 - FLAM_C SINE Alu -4 129 1 593 265 60 20 chr17 66336541 66336741 -19101739 + MIR SINE MIR 20 227 -35 31 26 0 0 chr17 66337344 66337382 -19101098 + AT_rich Low_complexity Low_complexity 1 38 0 203 133 0 96 chr17 66339331 66339414 -19099066 + (CCCCG)n Simple_repeat Simple_repeat 3 77 0 2289 65 0 0 chr17 66339927 66340217 -19098263 - AluSc SINE Alu -19 290 1 326 200 35 35 chr17 66340228 66340313 -19098167 - MIR3 SINE MIR -35 173 89 457 262 98 30 chr17 66340514 66340678 -19097802 - MER5A DNA MER1_type -1 188 14 578 94 0 52 chr17 66341801 66341897 -19096583 - AluSx SINE Alu -9 301 211 1425 88 0 62 chr17 66341949 66342175 -19096305 - AluSx SINE Alu -100 212 1 624 309 16 16 chr17 66342186 66342377 -19096103 - MIR SINE MIR -16 246 56 782 146 0 16 chr17 66342396 66342519 -19095961 - FLAM_C SINE Alu -11 122 2 1757 154 7 10 chr17 66342927 66343226 -19095254 - AluJo SINE Alu -14 298 1 203 299 178 46 chr17 66343356 66343530 -19094950 - L2 LINE L2 -7 3265 3069 221 354 69 20 chr17 66343586 66343832 -19094648 - L2 LINE L2 -1244 2070 1813 2298 109 0 0 chr17 66343837 66344148 -19094332 + AluSx SINE Alu 1 311 -1 229 283 38 19 chr17 66344232 66344338 -19094142 - L2 LINE L2 -1918 1396 1289 437 316 145 16 chr17 66346492 66346685 -19091795 + MIR SINE MIR 33 250 -12 1085 118 0 12 chr17 66347409 66347570 -19090910 - AluSg/x SINE Alu -12 300 142 284 229 42 42 chr17 66347690 66347783 -19090697 + MLT1H1 LTR MaLR 3 95 -460 2251 246 30 13 chr17 66347783 66348308 -19090172 + MLT1F LTR MaLR 1 534 -8 783 254 163 42 chr17 66348317 66348722 -19089758 + MLT1H1 LTR MaLR 96 549 -6 1985 118 10 10 chr17 66348774 66349080 -19089400 + AluSx SINE Alu 1 306 -6 210 260 0 20 chr17 66349103 66349153 -19089327 + MIR3 SINE MIR 109 157 -51 2395 96 0 0 chr17 66349705 66350006 -19088474 + AluSx SINE Alu 1 301 -11 2110 134 3 7 chr17 66350112 66350419 -19088061 + AluSg SINE Alu 3 308 -2 284 244 0 77 chr17 66350420 66350498 -19087982 - MIR SINE MIR -79 129 58 325 294 118 25 chr17 66350750 66350869 -19087611 - L2 LINE L2 0 3272 3143 419 245 160 72 chr17 66350979 66351310 -19087170 + L2 LINE L2 2257 2616 -698 192 359 0 0 chr17 66351314 66351378 -19087102 + L2 LINE L2 1207 1270 -2044 852 247 98 66 chr17 66351378 66351816 -19086664 + L2 LINE L2 1505 1956 -1358 2129 113 7 0 chr17 66351847 66352158 -19086322 + AluSx SINE Alu 1 313 0 1823 161 3 43 chr17 66352484 66352807 -19085673 + AluJb SINE Alu 3 312 0 1857 141 0 11 chr17 66352890 66353166 -19085314 + AluJb SINE Alu 1 273 -39 243 0 0 0 chr17 66353185 66353212 -19085268 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2149 128 7 0 chr17 66354186 66354492 -19083988 - AluJo SINE Alu -4 308 1 270 56 0 0 chr17 66354911 66354947 -19083533 + (TG)n Simple_repeat Simple_repeat 2 37 0 1563 153 16 86 chr17 66355142 66355456 -19083024 + AluJb SINE Alu 1 292 -20 2136 126 3 0 chr17 66355539 66355825 -19082655 + AluSq SINE Alu 1 290 -23 207 0 0 0 chr17 66355825 66355848 -19082632 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2136 126 3 0 chr17 66355848 66355863 -19082617 + AluSq SINE Alu 290 303 -10 893 135 0 0 chr17 66356140 66356266 -19082214 + AluSg/x SINE Alu 170 295 -15 2372 101 0 0 chr17 66356274 66356572 -19081908 + AluSx SINE Alu 15 312 0 351 223 131 23 chr17 66356715 66356845 -19081635 - L1MC5 LINE L1 -209 7752 7609 228 244 181 31 chr17 66356862 66356989 -19081491 + L1MB7 LINE L1 5575 5720 -401 334 258 169 80 chr17 66357050 66357275 -19081205 + MIR SINE MIR 6 250 -12 1665 127 20 16 chr17 66357364 66357493 -19080987 + AluJo SINE Alu 1 133 -179 2187 131 6 6 chr17 66357493 66357805 -19080675 + AluSx SINE Alu 1 312 0 1665 127 20 16 chr17 66357805 66357927 -19080553 + AluJo SINE Alu 133 253 -59 182 274 85 66 chr17 66358715 66358821 -19079659 - MER5B DNA MER1_type -29 149 42 280 238 30 40 chr17 66358999 66359100 -19079380 + MIR SINE MIR 106 205 -57 2251 107 0 7 chr17 66359157 66359455 -19079025 - AluSx SINE Alu -16 296 1 1633 152 35 111 chr17 66359515 66359910 -19078570 + MLT1A1 LTR MaLR 1 365 0 2330 153 69 15 chr17 66360222 66360627 -19077853 - MSTA LTR MaLR 0 428 2 429 250 58 0 chr17 66360756 66360860 -19077620 + L2 LINE L2 3150 3259 -13 213 94 0 0 chr17 66360860 66360892 -19077588 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2132 120 7 3 chr17 66360966 66361265 -19077215 + AluSq SINE Alu 1 300 -13 2344 108 32 69 chr17 66361902 66362237 -19076243 + THE1B LTR MaLR 1 322 -42 2156 131 0 0 chr17 66362237 66362542 -19075938 - AluSx SINE Alu -7 305 1 2344 108 32 69 chr17 66362542 66362584 -19075896 + THE1B LTR MaLR 322 364 0 354 261 37 45 chr17 66363063 66363197 -19075283 + L1MC5 LINE L1 7549 7681 -280 2235 103 0 26 chr17 66363224 66363526 -19074954 - AluSx SINE Alu -18 294 1 1232 92 0 0 chr17 66363723 66363902 -19074578 - AluSg/x SINE Alu 0 308 130 2261 149 78 13 chr17 66363902 66364209 -19074271 + L1MB7 LINE L1 5690 6039 -145 1920 140 3 21 chr17 66364209 66364495 -19073985 - AluJb SINE Alu -31 281 1 2261 149 78 13 chr17 66364495 66364651 -19073829 + L1MB7 LINE L1 6039 6183 -1 381 172 0 16 chr17 66365263 66365327 -19073153 + L2 LINE L2 3189 3251 -62 241 186 186 14 chr17 66365392 66365462 -19073018 + L1MEc LINE L1 36 117 -6279 377 141 22 76 chr17 66365492 66365584 -19072896 + L1MEc LINE L1 100 186 -6210 2154 127 0 0 chr17 66365586 66365901 -19072579 + AluSx SINE Alu 1 315 0 737 203 16 42 chr17 66366323 66366515 -19071965 - LTR41 LTR ERVL -586 187 1 1130 225 20 55 chr17 66366522 66366629 -19071851 + L1MEc LINE L1 796 905 -5491 1805 180 7 0 chr17 66366629 66366923 -19071557 + AluJo SINE Alu 1 296 -16 1130 225 20 55 chr17 66366923 66367215 -19071265 + L1MEc LINE L1 905 1181 -5215 780 199 50 77 chr17 66367299 66367364 -19071116 - MER58A DNA MER1_type -2197 223 158 1637 127 120 11 chr17 66367364 66367631 -19070849 - AluSc SINE Alu -13 296 1 780 199 50 77 chr17 66367631 66367786 -19070694 - MER58A DNA MER1_type -2262 158 9 268 164 14 110 chr17 66368023 66368068 -19070412 + MLT1D LTR MaLR 18 55 -571 1851 171 3 3 chr17 66368068 66368360 -19070120 - AluJb SINE Alu -17 295 4 268 164 14 110 chr17 66368360 66368387 -19070093 + MLT1D LTR MaLR 55 83 -543 914 156 14 0 chr17 66368387 66368528 -19069952 + AluJo SINE Alu 1 143 -169 279 227 0 40 chr17 66368548 66368623 -19069857 + GA-rich Low_complexity Low_complexity 3 74 0 685 61 20 0 chr17 66368625 66368724 -19069756 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 1296 213 59 37 chr17 66368725 66368757 -19069723 + MLT1D LTR MaLR 89 119 -386 2196 79 0 4 chr17 66368757 66369022 -19069458 + AluSq SINE Alu 34 297 -16 1296 213 59 37 chr17 66369022 66369397 -19069083 + MLT1D LTR MaLR 119 505 0 1802 141 0 12 chr17 66369520 66369776 -19068704 - AluSx SINE Alu -59 253 1 272 213 49 0 chr17 66369875 66369936 -19068544 + MIR SINE MIR 34 97 -111 508 320 64 5 chr17 66370209 66370412 -19068068 + MIR SINE MIR 6 220 -42 1083 110 0 0 chr17 66370558 66370694 -19067786 + AluSq/x SINE Alu 1 136 -177 2460 99 0 0 chr17 66370694 66371006 -19067474 + AluSx SINE Alu 1 312 0 319 303 142 6 chr17 66371735 66371897 -19066583 - MIR SINE MIR -71 191 8 1859 151 16 23 chr17 66371986 66372290 -19066190 - AluJb SINE Alu -10 302 1 328 259 88 20 chr17 66372341 66372488 -19065992 - MER103 DNA DNA -7 159 3 2086 117 0 27 chr17 66372824 66373123 -19065357 - AluSx SINE Alu -21 291 1 207 69 0 0 chr17 66373235 66373264 -19065216 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2591 60 0 0 chr17 66373266 66373566 -19064914 - AluY SINE Alu -11 300 1 2387 76 13 28 chr17 66373620 66373937 -19064543 - AluSx SINE Alu 0 312 1 211 356 92 23 chr17 66373937 66374024 -19064456 + L2 LINE L2 3153 3245 -27 1817 142 3 66 chr17 66374100 66374418 -19064062 + AluJo SINE Alu 4 301 -11 2134 141 0 3 chr17 66374521 66374834 -19063646 + AluSx SINE Alu 1 312 0 184 245 0 41 chr17 66374834 66374883 -19063597 + MER5B DNA MER1_type 29 75 -103 444 118 0 0 chr17 66374906 66374974 -19063506 + (TG)n Simple_repeat Simple_repeat 2 69 0 744 303 13 4 chr17 66375064 66375302 -19063178 - L1ME LINE L1 -383 5738 5499 2650 58 0 0 chr17 66375848 66376158 -19062322 + AluY SINE Alu 2 311 0 418 261 117 9 chr17 66376254 66376476 -19062004 + L1ME LINE L1 5579 5824 -297 302 265 163 0 chr17 66376605 66376703 -19061777 - L2 LINE L2 -4 3309 3196 580 183 38 54 chr17 66376720 66376738 -19061742 + AluY SINE Alu 121 138 -173 2519 58 0 10 chr17 66376738 66377051 -19061429 + AluYa5 SINE Alu 1 310 -1 580 183 38 54 chr17 66377051 66377218 -19061262 + AluY SINE Alu 138 303 -8 202 120 0 40 chr17 66377218 66377268 -19061212 + (CA)n Simple_repeat Simple_repeat 1 48 0 933 176 23 17 chr17 66377379 66377555 -19060925 + MER5B DNA MER1_type 2 178 0 406 238 99 6 chr17 66377573 66377709 -19060771 + MIR SINE MIR 41 186 -63 1971 146 0 0 chr17 66378016 66378291 -19060189 - AluSx SINE Alu -8 304 30 2103 150 0 0 chr17 66378884 66379177 -19059303 - AluJb SINE Alu -16 296 4 527 185 23 23 chr17 66379185 66379315 -19059165 - L1MC4 LINE L1 0 8042 7913 204 97 0 0 chr17 66379320 66379351 -19059129 + (CA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr17 66379351 66379376 -19059104 + AT_rich Low_complexity Low_complexity 1 25 0 1293 165 5 5 chr17 66379376 66379582 -19058898 + AluJb SINE Alu 1 206 -106 355 309 6 33 chr17 66379683 66379864 -19058616 + G-rich Low_complexity Low_complexity 5 180 0 271 333 0 0 chr17 66379911 66380004 -19058476 + G-rich Low_complexity Low_complexity 1 93 0 988 171 0 0 chr17 66380268 66380420 -19058060 + AluSg/x SINE Alu 132 283 -29 221 0 35 0 chr17 66380430 66380459 -19058021 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1144 248 69 65 chr17 66380934 66381108 -19057372 + L2 LINE L2 2832 3004 -309 1787 159 15 0 chr17 66381108 66381379 -19057101 - AluJb SINE Alu -3 309 35 1144 248 69 65 chr17 66381379 66381683 -19056797 + L2 LINE L2 3004 3312 -1 385 228 44 70 chr17 66381676 66381790 -19056690 - MIR3 SINE MIR -16 192 82 * 24 0 0 0 chr17 66381873 66381897 -19056583 + AT_rich Low_complexity Low_complexity 1 24 0 2110 131 0 0 chr17 66382316 66382628 -19055852 + AluSx SINE Alu 1 312 0 2380 81 3 0 chr17 66382969 66383264 -19055216 - AluSx SINE Alu -16 296 1 22 35 0 0 chr17 66383500 66383529 -19054951 + AT_rich Low_complexity Low_complexity 1 29 0 250 310 35 11 chr17 66383856 66383943 -19054537 + L2 LINE L2 3214 3302 -11 1370 112 0 0 chr17 66383949 66384118 -19054362 + AluSx SINE Alu 1 169 -143 2367 88 0 0 chr17 66384735 66385041 -19053439 + AluSg SINE Alu 1 306 0 339 240 115 10 chr17 66385285 66385381 -19053099 + L2 LINE L2 3197 3302 -11 2378 95 7 0 chr17 66385387 66385681 -19052799 + AluSg SINE Alu 1 296 -14 2416 107 0 0 chr17 66386609 66386919 -19051561 - AluSg SINE Alu 0 310 1 2036 119 3 59 chr17 66386921 66387241 -19051239 - AluSx SINE Alu -10 302 1 257 107 0 18 chr17 66387812 66387868 -19050612 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 867 189 85 0 chr17 66387930 66388083 -19050397 + FAM SINE Alu 1 166 -9 262 304 22 0 chr17 66388143 66388235 -19050245 + GA-rich Low_complexity Low_complexity 1 94 0 2252 97 7 17 chr17 66388267 66388566 -19049914 + AluSx SINE Alu 1 296 -16 908 150 0 27 chr17 66388566 66388713 -19049767 + FLAM_C SINE Alu 1 143 0 242 246 49 0 chr17 66388866 66388927 -19049553 - MIR3 SINE MIR -2 206 143 550 206 103 0 chr17 66388932 66389078 -19049402 + MLT1C LTR MaLR 6 166 -301 2234 103 0 3 chr17 66389078 66389370 -19049110 - AluSx SINE Alu -18 294 4 568 192 49 136 chr17 66389378 66389513 -19048967 - L1MC4 LINE L1 0 8042 7897 204 97 0 0 chr17 66389513 66389544 -19048936 + (CA)n Simple_repeat Simple_repeat 2 32 0 568 192 49 136 chr17 66389544 66389569 -19048911 - L1MC4 LINE L1 -145 7897 7871 1853 166 3 3 chr17 66389569 66389858 -19048622 + AluJb SINE Alu 1 289 -23 2354 86 3 0 chr17 66389865 66390157 -19048323 + AluSx SINE Alu 1 293 -19 568 192 49 136 chr17 66390157 66390295 -19048185 - L1MC4 LINE L1 -177 7865 7762 1964 160 3 3 chr17 66390296 66390590 -19047890 + AluJb SINE Alu 1 294 -18 537 147 20 0 chr17 66390694 66390796 -19047684 + AluSp/q SINE Alu 198 301 -12 2104 123 31 0 chr17 66391105 66391398 -19047082 - AluSx SINE Alu -10 302 1 525 155 0 0 chr17 66392675 66392759 -19045721 - AluSg/x SINE Alu -23 289 206 260 274 179 19 chr17 66392947 66393053 -19045427 + MIR3 SINE MIR 42 164 -44 1221 301 14 98 chr17 66393067 66393453 -19045027 + L1MB4 LINE L1 5789 6137 -43 2424 71 0 3 chr17 66393453 66393748 -19044732 + AluSg SINE Alu 1 294 -16 1221 301 14 98 chr17 66393748 66393789 -19044691 + L1MB4 LINE L1 6137 6180 0 1935 170 0 19 chr17 66393800 66394118 -19044362 + AluSx SINE Alu 1 312 0 495 293 126 0 chr17 66395277 66395468 -19043012 - MIR SINE MIR -19 243 29 216 268 73 98 chr17 66395669 66395792 -19042688 - MIR SINE MIR -70 192 73 373 331 24 8 chr17 66396719 66396843 -19041637 + MIR SINE MIR 20 145 -63 717 145 60 0 chr17 66398302 66398419 -19040061 - AluSg/x SINE Alu -8 302 179 524 117 0 0 chr17 66398419 66398496 -19039984 - AluSg/x SINE Alu -69 241 165 482 208 21 0 chr17 66398648 66398744 -19039736 - AluJo SINE Alu -92 220 123 2386 99 0 0 chr17 66398993 66399287 -19039193 - AluSx SINE Alu -18 294 1 407 279 0 0 chr17 66399308 66399419 -19039061 - L1MC4 LINE L1 -395 7647 7537 366 226 9 85 chr17 66399687 66399724 -19038756 - MER5A DNA MER1_type -83 106 68 1004 171 6 0 chr17 66399724 66399888 -19038592 - FRAM SINE Alu -1 165 1 366 226 9 85 chr17 66399888 66399956 -19038524 - MER5A DNA MER1_type -121 68 9 1337 188 4 4 chr17 66400012 66400241 -19038239 - AluJb SINE Alu -20 292 64 249 314 20 0 chr17 66600254 66600356 -18838124 + L1M4c LINE L1 1710 1813 -4571 241 237 52 21 chr17 66600364 66600461 -18838019 + L1M4c LINE L1 2004 2103 -4460 3793 183 29 4 chr17 66600469 66601151 -18837329 - MER50 LTR ERV1 -35 699 1 1466 137 13 9 chr17 66601153 66601379 -18837101 - MER50-int LTR ERV1 -10 7195 6969 2311 80 0 3 chr17 66603057 66603377 -18835103 - AluY SINE Alu 0 319 1 369 0 0 0 chr17 66603599 66603640 -18834840 + (TG)n Simple_repeat Simple_repeat 2 42 0 861 191 21 63 chr17 66605853 66606042 -18832438 + AluJb SINE Alu 113 293 -19 2049 121 3 10 chr17 66606241 66606530 -18831950 - AluSx SINE Alu -25 287 1 29 28 0 0 chr17 66607293 66607329 -18831151 + AT_rich Low_complexity Low_complexity 1 36 0 267 192 51 39 chr17 66607750 66607828 -18830652 + MER5A DNA MER1_type 86 164 -25 190 276 115 46 chr17 66607763 66607850 -18830630 - MER5A DNA MER1_type -90 99 7 * 1729 216 28 20 chr17 66608465 66608859 -18829621 + MLT2C1 LTR ERVL 1 397 0 586 128 12 0 chr17 66609202 66609288 -18829192 + LTR12 LTR ERV1 628 714 0 819 168 20 0 chr17 66609288 66609437 -18829043 - L1P LINE L1 -1207 4939 4788 5676 117 30 2 chr17 66609445 66610334 -18828146 + L1PA12 LINE L1 5254 6167 -1 21 36 0 0 chr17 66610389 66610417 -18828063 + AT_rich Low_complexity Low_complexity 1 28 0 2063 97 0 0 chr17 66610536 66610805 -18827675 - AluSc SINE Alu -40 269 1 259 274 123 68 chr17 66611370 66611516 -18826964 + MIR SINE MIR 8 161 -101 * 413 239 34 17 chr17 66611505 66611622 -18826858 - MIR SINE MIR 0 262 144 215 310 221 18 chr17 66612628 66612741 -18825739 - MER5B DNA MER1_type 0 178 43 899 259 80 20 chr17 66614010 66614620 -18823860 + L1M4c LINE L1 2281 2899 -3483 772 119 0 0 chr17 66615400 66615518 -18822962 + L1PA15 LINE L1 6041 6158 -7 1444 238 138 58 chr17 66615805 66616355 -18822125 + MLT1E1 LTR MaLR 60 653 -1 1956 161 27 21 chr17 66616438 66616811 -18821669 + THE1C LTR MaLR 1 375 0 241 315 28 42 chr17 66617375 66617518 -18820962 + HAL1b LINE L1 245 385 -963 1121 328 58 19 chr17 66617635 66618370 -18820110 + L1MEc LINE L1 150 913 -5483 378 230 44 0 chr17 66620486 66620599 -18817881 - L1 LINE L1 -841 5305 5188 2856 188 107 4 chr17 66620611 66621296 -18817184 - L1 LINE L1 -1079 5067 4313 203 0 0 36 chr17 66621585 66621613 -18816867 + (TTAAA)n Simple_repeat Simple_repeat 3 29 0 1052 188 9 45 chr17 66621879 66622103 -18816377 - MER50-int LTR ERV1 -6989 216 1 3911 169 23 11 chr17 66622222 66622930 -18815550 - MER50 LTR ERV1 -12 722 7 340 290 92 62 chr17 66622985 66623389 -18815091 + L1MEc LINE L1 1968 2383 -4013 2835 78 8 0 chr17 66623738 66624120 -18814360 + L1PA7 LINE L1 5763 6147 -7 222 379 53 0 chr17 66624350 66624445 -18814035 + MER5B DNA MER1_type 78 177 -1 4328 104 13 1 chr17 66625351 66626250 -18812230 - L1PA8A LINE L1 -506 5625 4715 1093 117 0 0 chr17 66626248 66626419 -18812061 - L1PA8A LINE L1 -1672 4474 4304 * 1937 120 0 0 chr17 66626420 66626711 -18811769 - L1PA8A LINE L1 -2186 3960 3670 4540 175 11 7 chr17 66626717 66627633 -18810847 - L1 LINE L1 -1088 5058 4139 1747 126 0 43 chr17 66628112 66628390 -18810090 + AluSg SINE Alu 35 300 -10 2232 83 6 52 chr17 66628756 66629081 -18809399 + AluSg SINE Alu 1 310 0 35 0 0 0 chr17 66629809 66629844 -18808636 + AT_rich Low_complexity Low_complexity 1 35 0 6500 168 6 21 chr17 66630101 66631226 -18807254 - L1P LINE L1 -1955 4191 3087 2079 139 3 3 chr17 66631226 66631535 -18806945 - AluSq SINE Alu -2 311 3 6500 168 6 21 chr17 66631535 66631662 -18806818 - L1P LINE L1 -3059 3087 2959 1980 114 11 0 chr17 66631664 66631945 -18806535 + MLT2A2 LTR ERVL 2 285 -168 26 0 0 0 chr17 66632154 66632180 -18806300 + AT_rich Low_complexity Low_complexity 1 26 0 303 213 0 0 chr17 66632297 66632372 -18806108 + (CA)n Simple_repeat Simple_repeat 2 76 0 3139 141 6 4 chr17 66633335 66633831 -18804649 + LOR1a LTR ERV1 1 497 0 1350 108 5 5 chr17 66634892 66635096 -18803384 + L1PB2 LINE L1 5946 6149 -2 187 349 0 81 chr17 66635216 66635302 -18803178 - L3b LINE CR1 -18 1565 1487 258 32 0 0 chr17 66635531 66635562 -18802918 + (TG)n Simple_repeat Simple_repeat 2 32 0 205 418 11 0 chr17 66635975 66636066 -18802414 + MIR3 SINE MIR 82 173 -35 2912 184 132 43 chr17 66636104 66637165 -18801315 - L1MB2 LINE L1 -7 7583 6435 699 171 0 0 chr17 66638333 66638462 -18800018 + (TG)n Simple_repeat Simple_repeat 2 130 0 315 209 143 0 chr17 66639812 66639903 -18798577 + MER5A DNA MER1_type 10 113 -76 7544 209 143 14 chr17 66640021 66641850 -18796630 - L1MB2 LINE L1 -5488 2077 14 739 174 30 0 chr17 66641889 66642021 -18796459 + MSTB1 LTR MaLR 1 136 -296 2204 90 0 52 chr17 66642135 66642445 -18796035 - AluSq SINE Alu -14 299 6 587 77 0 0 chr17 66642507 66642585 -18795895 + Alu SINE Alu 1 78 -231 205 125 150 0 chr17 66643210 66643250 -18795230 + L2 LINE L2 3262 3307 -6 293 143 0 0 chr17 66643250 66643299 -18795181 + Alu SINE Alu 1 49 -253 * 374 131 49 0 chr17 66643294 66643355 -18795125 + AluS SINE Alu 14 77 -226 1197 223 75 93 chr17 66643455 66644029 -18794451 - LTR28 LTR ERV1 -292 534 1 636 293 33 6 chr17 66644072 66644253 -18794227 + MER5A DNA MER1_type 1 186 -3 1849 223 6 0 chr17 66645057 66645416 -18793064 - MLT1A1 LTR MaLR -4 361 1 189 231 39 39 chr17 66645864 66645916 -18792564 + L3 LINE CR1 1520 1571 -6 558 110 12 0 chr17 66646580 66646662 -18791818 + THE1C LTR MaLR 293 375 0 189 339 124 8 chr17 66646842 66646963 -18791517 - MIR3 SINE MIR 0 208 74 946 174 37 0 chr17 66647830 66647991 -18790489 + FRAM SINE Alu 1 164 -12 1988 151 0 16 chr17 66648004 66648321 -18790159 + AluSx SINE Alu 1 312 0 2023 96 86 0 chr17 66649028 66649308 -18789172 + AluSq SINE Alu 1 304 -9 1937 140 20 10 chr17 66649608 66649900 -18788580 + AluJb SINE Alu 1 295 -17 441 242 109 12 chr17 66650061 66650226 -18788254 + L1MC/D LINE L1 417 597 -5945 213 115 0 58 chr17 66650226 66650278 -18788202 + (TTTA)n Simple_repeat Simple_repeat 1 49 0 36 40 0 0 chr17 66650285 66650335 -18788145 + AT_rich Low_complexity Low_complexity 1 50 0 4185 252 82 52 chr17 66650346 66650790 -18787690 + L1MC/D LINE L1 796 1225 -5419 186 43 0 0 chr17 66650790 66650813 -18787667 + (GA)n Simple_repeat Simple_repeat 2 24 0 4185 252 82 52 chr17 66650813 66651550 -18786930 + L1MC/D LINE L1 1225 1938 -4706 1926 60 48 8 chr17 66651550 66651798 -18786682 - AluY SINE Alu -16 295 38 4185 252 82 52 chr17 66651798 66653964 -18784516 + L1MC/D LINE L1 1938 4452 -2192 357 163 116 23 chr17 66654459 66654545 -18783935 - AluJ/FLAM SINE Alu -208 94 1 2124 92 23 0 chr17 66654581 66654884 -18783596 + L1PA13 LINE L1 5853 6162 -1 228 221 39 67 chr17 66654985 66655089 -18783391 + L1MC/D LINE L1 6198 6298 -2008 2146 125 3 0 chr17 66655893 66656196 -18782284 - AluSx SINE Alu -8 304 1 1839 176 0 0 chr17 66656667 66656957 -18781523 + AluJb SINE Alu 1 290 -22 1998 139 0 0 chr17 66657126 66657413 -18781067 + AluSx SINE Alu 1 287 -25 1962 86 0 0 chr17 66657514 66657791 -18780689 + AluSx SINE Alu 40 316 0 2131 105 0 51 chr17 66658397 66658711 -18779769 - AluSx SINE Alu -14 298 1 499 313 85 19 chr17 66658834 66659093 -18779387 - L2 LINE L2 -234 3079 2804 623 248 86 50 chr17 66660484 66660706 -18777774 + MIR SINE MIR 7 236 -26 2388 70 3 7 chr17 66662130 66662432 -18776048 + AluSc SINE Alu 1 301 -8 1485 184 19 15 chr17 66662489 66662760 -18775720 + AluJb SINE Alu 11 282 -30 4352 34 13 11 chr17 66662775 66663337 -18775143 - L1PA5 LINE L1 0 6154 5618 780 108 146 0 chr17 66663370 66663500 -18774980 + AluSg/x SINE Alu 157 305 -4 1732 136 3 58 chr17 66664538 66664833 -18773647 + AluJo SINE Alu 10 288 -24 1658 168 13 13 chr17 66665116 66665419 -18773061 + AluJb SINE Alu 1 303 -9 456 256 143 18 chr17 66665434 66665602 -18772878 - MIR SINE MIR -73 189 1 990 280 20 6 chr17 66666341 66666691 -18771789 - L1ME LINE L1 -509 5661 5307 2144 106 0 10 chr17 66666883 66667176 -18771304 - AluSq SINE Alu -18 295 6 2254 103 0 0 chr17 66667187 66667477 -18771003 - AluSx SINE Alu -22 290 1 1077 133 109 19 chr17 66667810 66667906 -18770574 - MER30 DNA MER1_type 0 230 144 2141 105 0 29 chr17 66667906 66668043 -18770437 + AluSx SINE Alu 1 140 -172 2299 90 0 7 chr17 66668043 66668343 -18770137 + AluSc SINE Alu 1 298 -11 2141 105 0 29 chr17 66668343 66668511 -18769969 + AluSx SINE Alu 140 297 -15 1077 133 109 19 chr17 66668511 66668625 -18769855 - MER30 DNA MER1_type -86 144 1 1799 133 61 0 chr17 66669039 66669318 -18769162 + AluSx SINE Alu 1 296 -16 2445 75 7 0 chr17 66669327 66669635 -18768845 + AluSg SINE Alu 1 310 0 216 0 0 0 chr17 66669664 66669688 -18768792 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr17 66669787 66669809 -18768671 + AT_rich Low_complexity Low_complexity 1 22 0 334 297 249 0 chr17 66670387 66670572 -18767908 - MIR SINE MIR -1 261 31 635 175 84 13 chr17 66671107 66671123 -18767357 - L1MA10 LINE L1 -1 6333 6318 1881 166 128 50 chr17 66671123 66671298 -18767182 - L1ME1 LINE L1 -6 6160 6000 1925 185 27 46 chr17 66671298 66671774 -18766706 - MLT1C LTR MaLR 0 467 1 1881 166 128 50 chr17 66671774 66672098 -18766382 - L1ME1 LINE L1 -166 6000 5622 917 209 63 52 chr17 66672152 66672291 -18766189 - L1ME LINE L1 -848 5298 5162 670 177 16 16 chr17 66672291 66672415 -18766065 + FLAM_A SINE Alu 1 124 -9 917 209 63 52 chr17 66672415 66672624 -18765856 - L1ME LINE L1 -984 5162 4946 963 73 8 0 chr17 66673519 66673643 -18764837 + AluSp SINE Alu 1 125 -188 243 156 21 115 chr17 66673743 66673839 -18764641 - L1MC5 LINE L1 -238 7723 7637 807 157 0 0 chr17 66673947 66674068 -18764412 + FLAM_C SINE Alu 1 121 -12 22 35 0 0 chr17 66674068 66674097 -18764383 + AT_rich Low_complexity Low_complexity 1 29 0 668 243 0 0 chr17 66674255 66674391 -18764089 + AluJo SINE Alu 1 136 -176 575 306 103 34 chr17 66674764 66675209 -18763271 + MLT1L LTR MaLR 122 597 -18 316 247 140 65 chr17 66676052 66676165 -18762315 + L2 LINE L2 3099 3233 -80 2191 93 7 3 chr17 66676165 66676456 -18762024 + AluSg SINE Alu 1 292 -18 316 247 140 65 chr17 66676456 66676528 -18761952 + L2 LINE L2 3233 3298 -15 2345 93 0 3 chr17 66676733 66677034 -18761446 - AluSx SINE Alu -12 300 1 772 297 47 4 chr17 66677186 66677422 -18761058 - L2 LINE L2 -655 2659 2414 34 0 0 0 chr17 66677722 66677756 -18760724 + AT_rich Low_complexity Low_complexity 1 34 0 257 234 234 32 chr17 66678306 66678464 -18760016 - L2 LINE L2 -1162 2152 1963 438 181 75 0 chr17 66678637 66678731 -18759749 - MER20 DNA MER1_type -78 141 41 2240 84 0 7 chr17 66679141 66679449 -18759031 + AluSx SINE Alu 1 306 0 1483 154 0 0 chr17 66679647 66679867 -18758613 - AluSg/x SINE Alu -5 307 88 2369 73 21 0 chr17 66679878 66680167 -18758313 - AluSc SINE Alu -14 295 1 1891 144 11 21 chr17 66680180 66680465 -18758015 - AluJo SINE Alu -30 282 1 2005 146 0 16 chr17 66681186 66681501 -18756979 - AluJb SINE Alu -2 310 1 1689 155 12 59 chr17 66681936 66682128 -18756352 - AluJo SINE Alu -5 307 134 2242 94 0 20 chr17 66682128 66682426 -18756054 + AluSc SINE Alu 1 292 -17 1689 155 12 59 chr17 66682426 66682555 -18755925 - AluJo SINE Alu -178 134 1 2176 113 3 0 chr17 66682564 66682865 -18755615 - AluSc SINE Alu -7 302 1 1931 139 17 0 chr17 66683767 66684061 -18754419 - AluJb SINE Alu -13 299 1 24 0 0 0 chr17 66684349 66684373 -18754107 + AT_rich Low_complexity Low_complexity 1 24 0 411 250 72 26 chr17 66684676 66684828 -18753652 + L1ME4a LINE L1 5614 5772 -349 453 254 137 58 chr17 66684840 66685045 -18753435 + MIR SINE MIR 2 222 -40 331 192 138 39 chr17 66685140 66685270 -18753210 + L1ME4a LINE L1 5786 5928 -193 594 282 90 8 chr17 66685536 66685770 -18752710 - MIR SINE MIR 0 262 10 363 229 74 108 chr17 66687414 66688008 -18750472 - MLT1H LTR MaLR -1 553 1 2148 109 6 16 chr17 66688641 66688954 -18749526 - AluSg SINE Alu 0 310 1 2111 140 0 6 chr17 66689175 66689489 -18748991 + AluSx SINE Alu 1 312 0 1922 143 13 13 chr17 66691058 66691359 -18747121 + AluJb SINE Alu 1 301 -11 26 50 0 0 chr17 66691499 66691539 -18746941 + AT_rich Low_complexity Low_complexity 1 40 0 1590 154 34 20 chr17 66691548 66691841 -18746639 - AluJb SINE Alu -15 297 1 911 244 265 24 chr17 66691851 66692526 -18745954 - L2 LINE L2 0 3313 2466 245 325 129 41 chr17 66692781 66693076 -18745404 + L2 LINE L2 1359 1679 -1635 955 95 0 29 chr17 66693736 66693873 -18744607 - AluSg/x SINE Alu -9 303 171 320 278 56 0 chr17 66693918 66694008 -18744472 - L2 LINE L2 -20 3252 3158 273 308 17 51 chr17 66694034 66694151 -18744329 - MER5B DNA MER1_type -41 137 25 2096 111 0 24 chr17 66694188 66694486 -18743994 - AluSx SINE Alu -17 295 5 2159 138 0 0 chr17 66695158 66695470 -18743010 + AluSx SINE Alu 1 312 0 925 140 0 22 chr17 66695547 66695683 -18742797 + FLAM_C SINE Alu 1 133 0 943 117 0 41 chr17 66695909 66696054 -18742426 + FLAM_C SINE Alu 1 139 -4 762 197 0 8 chr17 66696250 66696382 -18742098 + FLAM_C SINE Alu 3 133 0 1331 113 118 0 chr17 66696597 66696792 -18741688 + AluSg/x SINE Alu 83 300 -10 525 171 0 0 chr17 66696843 66696931 -18741549 - AluJ/FRAM SINE Alu -2 310 223 840 193 193 16 chr17 66696931 66697174 -18741306 + L1MC4 LINE L1 6869 7154 -888 424 211 11 0 chr17 66697274 66697364 -18741116 + L1MC4 LINE L1 7161 7251 -791 1531 229 17 3 chr17 66697367 66697664 -18740816 + AluJo SINE Alu 1 301 -11 2313 197 138 45 chr17 66697664 66697812 -18740668 + L1MC4 LINE L1 7166 7299 -743 2353 100 0 0 chr17 66697812 66698111 -18740369 - AluSc SINE Alu -10 299 1 2313 197 138 45 chr17 66698111 66698631 -18739849 + L1MC4 LINE L1 7299 7896 -146 831 179 21 0 chr17 66699021 66699166 -18739314 - FAM SINE Alu -17 168 21 847 165 0 0 chr17 66699201 66699334 -18739146 + AluJo/FLAM SINE Alu 1 133 -179 430 194 0 0 chr17 66699334 66699406 -18739074 + AluJ/FRAM SINE Alu 219 290 -22 233 106 0 21 chr17 66699816 66699863 -18738617 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 1646 190 10 7 chr17 66701024 66701324 -18737156 + AluJb SINE Alu 1 301 -11 2394 60 0 7 chr17 66701376 66701674 -18736806 - AluY SINE Alu -15 296 1 521 189 0 0 chr17 66702047 66702142 -18736338 - L1 LINE L1 -2112 4034 3940 * 1331 248 19 8 chr17 66702137 66702516 -18735964 + L1 LINE L1 4040 4422 -1724 2405 225 119 61 chr17 66702656 66703529 -18734951 - L1MC4 LINE L1 -172 7666 6845 2534 50 0 16 chr17 66703529 66703832 -18734648 + AluY SINE Alu 1 298 -13 2405 225 119 61 chr17 66703832 66703936 -18734544 - L1MC4 LINE L1 -993 6845 6748 1910 136 11 0 chr17 66703936 66704209 -18734271 + AluJb SINE Alu 1 276 -36 2405 225 119 61 chr17 66704209 66704352 -18734128 - L1MC4 LINE L1 -1090 6748 6615 2436 75 0 0 chr17 66704352 66704647 -18733833 - AluSq SINE Alu -18 295 1 2405 225 119 61 chr17 66704647 66704766 -18733714 - L1MC4 LINE L1 -1223 6615 6331 310 215 15 0 chr17 66706231 66706296 -18732184 + MER5A DNA MER1_type 1 66 -123 227 234 21 11 chr17 66717855 66717949 -18720531 + (TTATA)n Simple_repeat Simple_repeat 4 98 0 556 155 58 29 chr17 66718234 66718337 -18720143 - FLAM_C SINE Alu -36 107 2 1960 147 0 26 chr17 66718401 66718708 -18719772 + AluSx SINE Alu 1 299 -13 201 94 0 0 chr17 66718895 66718927 -18719553 + (TA)n Simple_repeat Simple_repeat 2 33 0 1682 170 17 7 chr17 66719557 66719857 -18718623 - AluJb SINE Alu -9 303 1 8709 72 3 12 chr17 66719858 66720937 -18717543 - MER11C LTR ERVK -2 1069 1 567 246 33 83 chr17 66720977 66721217 -18717263 + L1MC4a LINE L1 5708 5935 -1873 180 271 0 68 chr17 66722463 66722522 -18715958 - L2 LINE L2 -9 3263 3209 355 277 245 0 chr17 66724899 66725083 -18713397 + MIR SINE MIR 28 256 -6 2422 103 0 0 chr17 66726041 66726353 -18712127 - AluSx SINE Alu 0 312 1 231 270 153 54 chr17 66726357 66726568 -18711912 - L1ME4a LINE L1 0 6121 5932 1477 158 73 37 chr17 66726568 66726840 -18711640 - AluJo SINE Alu -30 282 1 231 270 153 54 chr17 66726840 66726889 -18711591 - L1ME4a LINE L1 -189 5932 5889 2017 133 0 7 chr17 66726889 66727183 -18711297 - AluSx SINE Alu -20 292 1 231 270 153 54 chr17 66727183 66727588 -18710892 - L1ME4a LINE L1 -232 5889 5388 2245 105 3 3 chr17 66727691 66727987 -18710493 - AluSq SINE Alu -17 296 1 1724 150 98 0 chr17 66729465 66729739 -18708741 - AluSx SINE Alu -11 301 1 2265 92 14 0 chr17 66730695 66730989 -18707491 - AluSg SINE Alu -12 298 1 971 91 0 70 chr17 66731198 66731341 -18707139 + FLAM_C SINE Alu 1 133 0 200 163 0 47 chr17 66731441 66731484 -18706996 + (TATG)n Simple_repeat Simple_repeat 3 43 0 656 276 143 0 chr17 66732011 66732221 -18706259 - MIR SINE MIR 0 262 23 301 239 0 22 chr17 66732243 66732335 -18706145 - L1ME4a LINE L1 -50 6071 5982 633 110 0 0 chr17 66732342 66732424 -18706056 + Alu SINE Alu 220 301 -11 1633 170 73 0 chr17 66732470 66732758 -18705722 + AluJo SINE Alu 1 309 -3 309 243 81 47 chr17 66732930 66733078 -18705402 + L1ME3A LINE L1 5957 6109 -61 25 51 0 0 chr17 66733086 66733125 -18705355 + AT_rich Low_complexity Low_complexity 1 39 0 294 115 39 0 chr17 66733262 66733314 -18705166 + Alu SINE Alu 247 300 -2 354 211 48 102 chr17 66733321 66733386 -18705094 - HAL1b LINE L1 -322 1026 959 1835 114 75 14 chr17 66733386 66733666 -18704814 + AluSx SINE Alu 1 297 -15 354 211 48 102 chr17 66733666 66733766 -18704714 - HAL1b LINE L1 -389 959 870 259 194 217 54 chr17 66733820 66733949 -18704531 - HAL1b LINE L1 -766 582 433 1837 170 3 0 chr17 66735007 66735296 -18703184 + AluJb SINE Alu 2 291 -21 259 295 54 0 chr17 66735961 66736073 -18702407 - L1MC4a LINE L1 -1888 5920 5803 406 254 220 10 chr17 66736319 66736569 -18701911 - L1MC4a LINE L1 -336 5785 5483 21 0 0 0 chr17 66736869 66736890 -18701590 + AT_rich Low_complexity Low_complexity 1 21 0 1876 120 19 0 chr17 66738541 66738808 -18699672 + AluSx SINE Alu 30 301 -11 1902 124 4 0 chr17 66738908 66739174 -18699306 - AluSp SINE Alu -4 309 43 556 135 0 0 chr17 66739207 66739281 -18699199 - tRNA-Thr-ACT tRNA tRNA -2 75 2 247 241 79 101 chr17 66739816 66740044 -18698436 + L1ME4a LINE L1 5809 6031 -90 1503 156 53 46 chr17 66741745 66742028 -18696452 + AluJb SINE Alu 11 295 -17 343 335 110 12 chr17 66742059 66742232 -18696248 - MIR SINE MIR -48 214 25 480 249 276 45 chr17 66743945 66744343 -18694137 + L1PA6 LINE L1 5378 5867 -287 * 2894 156 128 35 chr17 66744011 66744589 -18693891 + L1MB7 LINE L1 5492 6136 -48 1636 178 51 0 chr17 66744589 66744864 -18693616 + AluJb SINE Alu 1 289 -23 2894 156 128 35 chr17 66744864 66744919 -18693561 + L1MB7 LINE L1 6136 6184 0 884 189 27 7 chr17 66745600 66745748 -18692732 + Tigger3(Golem) DNA MER2_type 2887 3037 0 1701 104 81 87 chr17 66746664 66746962 -18691518 + AluSq SINE Alu 5 300 -13 198 0 0 0 chr17 66746990 66747012 -18691468 + (TAGA)n Simple_repeat Simple_repeat 2 23 0 23 54 0 0 chr17 66747864 66747901 -18690579 + AT_rich Low_complexity Low_complexity 1 37 0 1505 113 5 9 chr17 66748314 66748526 -18689954 + AluSg/x SINE Alu 82 292 -20 842 160 21 14 chr17 66748597 66748741 -18689739 + FAM SINE Alu 6 150 -35 340 224 0 0 chr17 66748928 66748995 -18689485 + L2 LINE L2 3200 3266 -6 270 0 0 0 chr17 66749168 66749198 -18689282 + (TA)n Simple_repeat Simple_repeat 1 30 0 1624 164 10 31 chr17 66749356 66749649 -18688831 - AluJb SINE Alu -25 287 1 2269 109 0 7 chr17 66749652 66749954 -18688526 - AluSg SINE Alu -10 300 1 2395 72 3 19 chr17 66751675 66751982 -18686498 - AluSx SINE Alu -10 302 1 23 33 0 0 chr17 66753765 66753795 -18684685 + AT_rich Low_complexity Low_complexity 1 30 0 350 276 33 72 chr17 66756309 66756490 -18681990 - MER5B DNA MER1_type -2 176 3 1949 111 64 4 chr17 66756877 66757157 -18681323 + AluSx SINE Alu 1 297 -15 1162 102 0 36 chr17 66757157 66757324 -18681156 + AluSg/x SINE Alu 134 294 -18 248 211 44 97 chr17 66757972 66758086 -18680394 - L1MC/D LINE L1 -1893 5915 5808 2548 125 11 16 chr17 66758159 66758536 -18679944 - THE1C LTR MaLR 0 375 1 1726 169 12 35 chr17 66759146 66759629 -18678851 - AluJo SINE Alu 0 476 1 1221 141 6 0 chr17 66760081 66760258 -18678222 - AluJo SINE Alu -134 178 1 209 254 186 25 chr17 66760277 66760395 -18678085 + L2 LINE L2 1844 1980 -1334 2364 94 0 0 chr17 66761026 66761323 -18677157 - AluSg SINE Alu -13 297 1 1762 141 14 25 chr17 66761765 66762042 -18676438 - AluJo SINE Alu -20 292 19 228 278 0 0 chr17 66763810 66763864 -18674616 - MLT1H1 LTR MaLR 0 555 502 2376 97 3 3 chr17 66763864 66764172 -18674308 + AluSp SINE Alu 1 308 -5 270 252 67 10 chr17 66764295 66764462 -18674018 - MLT1D LTR MaLR 0 505 262 2255 99 0 3 chr17 66764508 66764802 -18673678 - AluSx SINE Alu -19 293 1 1154 145 4 98 chr17 66765045 66765195 -18673285 + L1MB3 LINE L1 5952 6070 -113 2293 110 0 0 chr17 66765195 66765496 -18672984 - AluSx SINE Alu -10 302 2 1154 145 4 98 chr17 66765496 66765600 -18672880 + L1MB3 LINE L1 6070 6182 -1 236 323 0 0 chr17 66766230 66766295 -18672185 - LTR16A1 LTR ERVL -17 440 376 846 144 0 0 chr17 66766777 66766895 -18671585 + FLAM_C SINE Alu 5 122 -21 321 327 79 0 chr17 66766897 66767099 -18671381 + L1M4 LINE L1 4774 4991 -1155 2201 94 50 0 chr17 66767302 66767599 -18670881 + AluSx SINE Alu 1 312 0 232 328 0 0 chr17 66767707 66767768 -18670712 - MIR SINE MIR -170 92 32 269 273 71 20 chr17 66767782 66767881 -18670599 + MIR SINE MIR 159 262 0 2582 48 0 10 chr17 66768648 66768957 -18669523 + AluY SINE Alu 1 306 -5 1942 89 10 52 chr17 66769065 66769386 -18669094 + AluSc SINE Alu 1 309 0 283 341 6 59 chr17 66769514 66769684 -18668796 + MIR3 SINE MIR 42 202 -6 281 142 0 50 chr17 66770398 66770459 -18668021 - AluJb SINE Alu -87 215 163 22 0 0 0 chr17 66770581 66770603 -18667877 + AT_rich Low_complexity Low_complexity 1 22 0 2269 111 0 16 chr17 66770789 66771104 -18667376 - AluSg SINE Alu 0 310 1 2958 117 121 15 chr17 66771644 66772122 -18666358 + MER1A DNA MER1_type 1 529 0 2362 94 3 3 chr17 66772315 66772624 -18665856 - AluSq SINE Alu -4 309 1 22 56 0 0 chr17 66773070 66773106 -18665374 + AT_rich Low_complexity Low_complexity 1 36 0 430 238 177 18 chr17 66773540 66773704 -18664776 + MIR SINE MIR 73 262 0 254 282 171 8 chr17 66773782 66773899 -18664581 + MIR SINE MIR 48 183 -79 187 250 10 10 chr17 66775490 66775586 -18662894 + (TA)n Simple_repeat Simple_repeat 2 97 0 23 68 0 0 chr17 66775908 66775952 -18662528 + AT_rich Low_complexity Low_complexity 1 44 0 476 237 36 43 chr17 66776599 66776738 -18661742 + MLT1K LTR MaLR 447 584 -4 2387 82 0 10 chr17 66776886 66777190 -18661290 + AluSp SINE Alu 1 301 -12 487 166 122 50 chr17 66777922 66778061 -18660419 + L1M4 LINE L1 5372 5520 -654 415 186 52 157 chr17 66778111 66778387 -18660093 + MER33 DNA MER1_type 1 235 -87 228 195 24 0 chr17 66778409 66778450 -18660030 - Alu SINE Alu -129 173 132 * 444 158 0 105 chr17 66778445 66778559 -18659921 + MER33 DNA MER1_type 257 358 -5 1521 245 61 97 chr17 66778569 66779305 -18659175 + HAL1 LINE L1 1524 2285 -222 1633 171 14 31 chr17 66779305 66779592 -18658888 + AluJo SINE Alu 1 282 -30 28 29 0 0 chr17 66779592 66779627 -18658853 + AT_rich Low_complexity Low_complexity 1 35 0 1521 245 61 97 chr17 66779627 66779672 -18658808 + HAL1 LINE L1 2284 2329 -178 2286 101 6 25 chr17 66779672 66779990 -18658490 + AluSx SINE Alu 1 312 0 1521 245 61 97 chr17 66779990 66780193 -18658287 + HAL1 LINE L1 2329 2507 0 1039 164 74 61 chr17 66781299 66781530 -18656950 - MIR SINE MIR -26 236 3 2038 138 15 6 chr17 66781660 66781994 -18656486 + MER1B DNA MER1_type 1 337 0 1861 169 0 23 chr17 66783148 66783449 -18655031 + AluJb SINE Alu 1 294 -18 3503 94 2 12 chr17 66783464 66784019 -18654461 + L1PB1 LINE L1 5232 5782 -369 215 74 0 0 chr17 66784019 66784046 -18654434 + (TG)n Simple_repeat Simple_repeat 1 27 0 247 626 6 0 chr17 66784046 66784225 -18654255 + (TA)n Simple_repeat Simple_repeat 1 180 0 2444 79 45 8 chr17 66784261 66784617 -18653863 + L1PB1 LINE L1 5783 6151 0 2063 119 10 0 chr17 66784930 66785223 -18653257 + AluY SINE Alu 1 296 -15 2359 83 3 0 chr17 66785583 66785884 -18652596 + AluSx SINE Alu 1 302 -10 2318 97 0 0 chr17 66786947 66787245 -18651235 + AluSg SINE Alu 1 298 -12 1804 156 21 0 chr17 66787724 66787852 -18650628 + AluJo SINE Alu 1 125 -187 189 0 0 0 chr17 66787852 66787873 -18650607 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 1804 156 21 0 chr17 66787873 66788026 -18650454 + AluJo SINE Alu 125 288 -24 288 0 0 0 chr17 66788028 66788060 -18650420 + (TA)n Simple_repeat Simple_repeat 2 33 0 195 42 0 0 chr17 66789346 66789370 -18649110 + (T)n Simple_repeat Simple_repeat 1 24 0 348 180 0 90 chr17 66789561 66789629 -18648851 + L1MB7 LINE L1 6075 6133 -51 2384 68 7 0 chr17 66789629 66789922 -18648558 + AluSg SINE Alu 1 295 -15 348 180 0 90 chr17 66789922 66789953 -18648527 + L1MB7 LINE L1 6133 6165 -19 1859 127 0 91 chr17 66789972 66790280 -18648200 + AluSx SINE Alu 1 280 -32 450 0 0 0 chr17 66790280 66790330 -18648150 + (TAAA)n Simple_repeat Simple_repeat 4 53 0 648 282 92 122 chr17 66791180 66791244 -18647236 + L2 LINE L2 1722 1786 -1486 7163 75 12 1 chr17 66791244 66793046 -18645434 + L1PA7 LINE L1 4303 6148 -6 648 282 92 122 chr17 66793046 66794575 -18643905 + L2 LINE L2 1786 3271 -1 1837 142 14 35 chr17 66794669 66794957 -18643523 + AluSx SINE Alu 1 282 -30 2985 89 32 36 chr17 66795894 66795957 -18642523 - MER1A DNA MER1_type -2175 527 465 639 0 0 0 chr17 66795957 66796028 -18642452 + (TG)n Simple_repeat Simple_repeat 1 71 0 2985 89 32 36 chr17 66796028 66796435 -18642045 - MER1A DNA MER1_type -2237 465 59 382 305 51 8 chr17 66797013 66797131 -18641349 - L2 LINE L2 0 3272 3150 2240 99 14 0 chr17 66798120 66798413 -18640067 - AluSx SINE Alu -15 297 1 21 0 0 0 chr17 66798463 66798484 -18639996 + AT_rich Low_complexity Low_complexity 1 21 0 463 251 60 60 chr17 66798545 66798653 -18639827 - MIR SINE MIR -85 177 67 2071 122 3 20 chr17 66798653 66798957 -18639523 + AluSg SINE Alu 1 299 -11 463 251 60 60 chr17 66798957 66799015 -18639465 - MIR SINE MIR -194 68 11 1741 148 46 40 chr17 66799075 66799379 -18639101 + AluJb SINE Alu 6 311 -1 1388 181 78 29 chr17 66799771 66800052 -18638428 - AluJo SINE Alu -17 295 1 910 150 0 0 chr17 66800434 66800567 -18637913 + FLAM_C SINE Alu 1 133 0 218 261 101 14 chr17 66800607 66800676 -18637804 + MIR SINE MIR 188 262 0 868 235 18 89 chr17 66801132 66801413 -18637067 + MIR SINE MIR 2 262 0 2245 103 0 6 chr17 66801480 66801791 -18636689 + AluY SINE Alu 1 309 -2 1484 181 43 12 chr17 66801831 66802157 -18636323 - MLT1A1 LTR MaLR -29 336 1 258 350 150 12 chr17 66802191 66802431 -18636049 + L2 LINE L2 2222 2494 -820 2291 94 0 0 chr17 66803582 66803870 -18634610 + AluSx SINE Alu 1 288 -24 2070 102 7 21 chr17 66803878 66804186 -18634294 + AluSg SINE Alu 1 304 0 208 0 0 0 chr17 66804163 66804278 -18634202 + (TAAA)n Simple_repeat Simple_repeat 2 116 0 482 189 0 0 chr17 66804287 66804377 -18634103 + AluJ/FRAM SINE Alu 220 309 -3 29 0 0 0 chr17 66804377 66804406 -18634074 + AT_rich Low_complexity Low_complexity 1 29 0 4622 136 83 37 chr17 66804489 66805466 -18633014 - L1MC3 LINE L1 -8 7777 6756 336 254 91 27 chr17 66805548 66805658 -18632822 + L2 LINE L2 3181 3297 -16 921 128 0 0 chr17 66806505 66806630 -18631850 + AluJb SINE Alu 1 125 -187 1119 123 0 0 chr17 66806633 66806788 -18631692 - AluSg/x SINE Alu -21 289 135 206 118 0 0 chr17 66806794 66806828 -18631652 + (A)n Simple_repeat Simple_repeat 1 34 0 1596 164 0 15 chr17 66806840 66807108 -18631372 + AluJb SINE Alu 11 274 -38 228 67 0 0 chr17 66807108 66807138 -18631342 + (GGGGA)n Simple_repeat Simple_repeat 5 34 0 234 213 0 80 chr17 66807491 66807566 -18630914 + LTR67 LTR ERVL 475 543 -14 * 292 141 28 70 chr17 66807499 66807570 -18630910 + MLT1K LTR MaLR 509 576 -12 657 182 118 35 chr17 66807921 66808091 -18630389 - MER5A DNA MER1_type -3 186 3 1938 124 59 7 chr17 66808282 66808572 -18629908 + AluSx SINE Alu 1 305 -7 2086 129 0 0 chr17 66808771 66809051 -18629429 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr17 66809054 66809079 -18629401 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 507 222 103 0 chr17 66809280 66809397 -18629083 + MLT1G1 LTR MaLR 430 558 -37 183 80 0 0 chr17 66809397 66809422 -18629058 + (T)n Simple_repeat Simple_repeat 1 25 0 1587 131 0 0 chr17 66809523 66809737 -18628743 - AluSq SINE Alu -91 222 9 486 276 44 58 chr17 66810208 66810433 -18628047 + MIR SINE MIR 1 222 -40 2006 155 3 0 chr17 66810475 66810779 -18627701 + AluJo SINE Alu 1 305 -7 2083 119 23 0 chr17 66811361 66811664 -18626816 + AluSx SINE Alu 1 310 -2 704 315 90 45 chr17 66811667 66812245 -18626235 - HAL1 LINE L1 -1883 624 21 439 234 195 13 chr17 66812304 66812458 -18626022 - MER69 DNA AcHobo -3 2523 2342 180 0 0 0 chr17 66812460 66812480 -18626000 + (TAA)n Simple_repeat Simple_repeat 1 20 0 2123 141 0 0 chr17 66812531 66812837 -18625643 + AluSx SINE Alu 1 306 -6 3968 137 63 23 chr17 66812838 66813635 -18624845 - L1MB7 LINE L1 -32 6152 5324 543 140 140 0 chr17 66813635 66813735 -18624745 - FLAM_A SINE Alu -19 123 10 821 125 16 0 chr17 66813837 66813965 -18624515 + AluSp/q SINE Alu 184 313 0 2091 100 0 0 chr17 66813998 66814257 -18624223 + AluSq SINE Alu 1 259 -54 1257 150 6 0 chr17 66814263 66814443 -18624037 - AluSq SINE Alu -132 181 1 1111 164 3 123 chr17 66814448 66814592 -18623888 - L1MB7 LINE L1 -1104 5042 4955 1988 156 0 0 chr17 66814592 66814881 -18623599 - AluSx SINE Alu -23 289 1 1111 164 3 123 chr17 66814881 66815053 -18623427 - L1MB7 LINE L1 -1191 4955 4764 2341 107 7 10 chr17 66815074 66815383 -18623097 - AluSx SINE Alu -4 308 1 1051 111 0 0 chr17 66815383 66815518 -18622962 - AluSq/x SINE Alu -177 135 1 414 260 14 20 chr17 66815520 66815666 -18622814 - MER69 DNA AcHobo -382 2144 2000 * 2116 219 34 0 chr17 66815658 66816102 -18622378 - MER69 DNA AcHobo -1962 564 106 480 248 8 16 chr17 66816104 66816229 -18622251 + L1ME3A LINE L1 6035 6158 -12 319 214 107 19 chr17 66816229 66816312 -18622168 - MER69 DNA AcHobo -1097 129 34 2276 114 0 0 chr17 66816312 66816609 -18621871 + AluSx SINE Alu 1 297 -15 319 214 107 19 chr17 66816609 66816628 -18621852 - MER69 DNA AcHobo -1192 34 18 406 294 49 49 chr17 66816629 66816792 -18621688 + MIR3 SINE MIR 19 181 -27 218 359 151 0 chr17 66816795 66816901 -18621579 - L2 LINE L2 -6 3266 3145 759 113 57 25 chr17 66816920 66817079 -18621401 + L1MC3 LINE L1 7567 7730 -55 259 98 0 0 chr17 66817131 66817182 -18621298 + L1MC3 LINE L1 7735 7785 0 448 369 141 0 chr17 66817349 66817590 -18620890 - L2 LINE L2 -338 2976 2702 2297 114 0 0 chr17 66817656 66817964 -18620516 + AluSc SINE Alu 1 308 -1 803 251 105 23 chr17 66818415 66818861 -18619619 + MLT1G LTR MaLR 1 506 -36 1847 129 4 4 chr17 66818861 66819124 -18619356 - AluSx SINE Alu -49 263 1 803 251 105 23 chr17 66819124 66819149 -18619331 + MLT1G LTR MaLR 506 528 -14 184 182 114 0 chr17 66819676 66819720 -18618760 - L2 LINE L2 0 3313 3265 1333 134 0 10 chr17 66819804 66820028 -18618452 - AluJb SINE Alu 0 308 87 1827 173 7 0 chr17 66820045 66820340 -18618140 - AluJb SINE Alu -15 297 1 473 243 69 42 chr17 66820413 66820557 -18617923 + LTR33 LTR ERVL 1 148 -373 598 302 35 0 chr17 66820567 66820769 -18617711 + LTR33 LTR ERVL 305 513 -8 299 265 0 15 chr17 66820770 66820838 -18617642 - L2 LINE L2 -189 3083 3017 1572 109 5 5 chr17 66820853 66821073 -18617407 - AluSg/x SINE Alu -21 291 72 1280 152 121 0 chr17 66821073 66821297 -18617183 - AluJb SINE Alu -61 251 1 1794 170 0 41 chr17 66821322 66821640 -18616840 + AluJb SINE Alu 3 307 -5 1333 115 11 0 chr17 66821648 66821830 -18616650 + AluSq SINE Alu 1 184 -129 1393 99 19 47 chr17 66821833 66822046 -18616434 + AluSq SINE Alu 98 304 -9 385 193 7 74 chr17 66822264 66822399 -18616081 + L1MC5 LINE L1 7451 7576 -385 776 241 6 11 chr17 66822427 66822601 -18615879 + FAM SINE Alu 3 175 0 691 188 15 23 chr17 66822655 66822788 -18615692 - FLAM_A SINE Alu 0 133 2 1112 163 47 133 chr17 66822789 66823089 -18615391 - Charlie2 DNA MER1_type -601 2261 1937 2212 112 3 0 chr17 66823089 66823375 -18615105 - AluSx SINE Alu -16 296 10 1112 163 47 133 chr17 66823375 66823387 -18615093 - Charlie2 DNA MER1_type -925 1937 1926 2066 131 6 10 chr17 66823387 66823700 -18614780 - AluJb SINE Alu 0 312 1 1112 163 47 133 chr17 66823700 66823829 -18614651 - Charlie2 DNA MER1_type -936 1926 1857 229 271 161 0 chr17 66823827 66823945 -18614535 - Charlie2 DNA MER1_type -2541 321 185 * 229 250 16 47 chr17 66824132 66824196 -18614284 + L2 LINE L2 3207 3268 -4 2090 121 10 10 chr17 66824417 66824715 -18613765 + AluSx SINE Alu 1 298 -14 1314 203 39 51 chr17 66824797 66825108 -18613372 + AluJo SINE Alu 6 312 0 1532 190 65 0 chr17 66825521 66825800 -18612680 + AluJo SINE Alu 13 309 -3 35 0 0 0 chr17 66826542 66826577 -18611903 + AT_rich Low_complexity Low_complexity 1 35 0 1967 139 0 10 chr17 66826579 66826874 -18611606 + AluSx SINE Alu 1 292 -20 25 31 0 0 chr17 66827031 66827063 -18611417 + AT_rich Low_complexity Low_complexity 1 32 0 801 175 0 0 chr17 66827225 66827351 -18611129 - FLAM_A SINE Alu -11 131 6 293 350 24 0 chr17 66827424 66827547 -18610933 - MIR SINE MIR -123 139 14 1933 122 54 0 chr17 66827570 66827849 -18610631 + AluSx SINE Alu 1 294 -18 1974 100 63 0 chr17 66827951 66828221 -18610259 + AluSx SINE Alu 1 287 -25 2279 113 7 0 chr17 66828313 66828623 -18609857 + AluSx SINE Alu 1 312 0 1680 157 32 11 chr17 66828660 66828941 -18609539 + AluJo SINE Alu 1 287 -25 1718 226 73 31 chr17 66829360 66829507 -18608973 + L1ME1 LINE L1 4713 4852 -1471 2045 110 38 0 chr17 66829507 66829798 -18608682 - AluSx SINE Alu -10 302 1 1718 226 73 31 chr17 66829798 66830487 -18607993 + L1ME1 LINE L1 4852 5575 -748 1218 176 81 0 chr17 66830494 66830715 -18607765 - AluJb SINE Alu -20 292 54 1689 204 93 9 chr17 66830716 66831137 -18607343 + L1ME1 LINE L1 5580 6035 -131 24 32 0 0 chr17 66831420 66831451 -18607029 + AT_rich Low_complexity Low_complexity 1 31 0 2357 97 3 0 chr17 66831568 66831877 -18606603 + AluSp SINE Alu 1 310 -3 958 108 0 0 chr17 66831877 66831997 -18606483 - AluJo/FLAM SINE Alu -192 120 1 239 264 124 34 chr17 66832157 66832273 -18606207 + L1ME LINE L1 4490 4594 -1552 2092 134 13 3 chr17 66832273 66832579 -18605901 - AluSx SINE Alu -3 309 1 239 264 124 34 chr17 66832579 66832663 -18605817 + L1ME LINE L1 4594 4669 -1477 1677 126 0 42 chr17 66832663 66832924 -18605556 + AluSx SINE Alu 39 288 -24 239 264 124 34 chr17 66832924 66832987 -18605493 + L1ME LINE L1 4669 4778 -1368 385 263 57 53 chr17 66833534 66833762 -18604718 + L1ME LINE L1 5511 5739 -382 1660 110 0 0 chr17 66834420 66834629 -18603851 - AluSq SINE Alu -104 209 1 227 242 50 30 chr17 66834655 66834754 -18603726 - MER5A DNA MER1_type -85 104 4 430 343 132 39 chr17 66834848 66834975 -18603505 - L3 LINE CR1 -240 1337 1223 1912 128 57 10 chr17 66834975 66835273 -18603207 - AluSx SINE Alu 0 312 1 430 343 132 39 chr17 66835273 66835606 -18602874 - L3 LINE CR1 -354 1223 834 1461 116 0 0 chr17 66835750 66835939 -18602541 - AluSq SINE Alu -124 189 1 2007 94 87 7 chr17 66836053 66836329 -18602151 - AluSc SINE Alu -11 298 1 1430 159 4 4 chr17 66837220 66837447 -18601033 + AluJb SINE Alu 71 297 -15 237 226 48 0 chr17 66837449 66837511 -18600969 + L1ME3A LINE L1 6101 6165 -5 1000 181 0 11 chr17 66837611 66837788 -18600692 - AluSg/x SINE Alu -7 303 129 509 292 99 16 chr17 66837788 66838031 -18600449 + L2 LINE L2 2862 3124 -189 740 255 7 0 chr17 66838033 66838186 -18600294 - MLT1A1 LTR MaLR -41 324 171 584 215 99 21 chr17 66838186 66838377 -18600103 + L2 LINE L2 3107 3312 -1 2236 115 3 3 chr17 66838395 66838707 -18599773 + AluSx SINE Alu 1 312 0 563 138 0 0 chr17 66838819 66838899 -18599581 + AluSg/x SINE Alu 209 288 -21 962 232 61 11 chr17 66839218 66839342 -18599138 + AluJo SINE Alu 1 117 -195 180 0 0 0 chr17 66839342 66839362 -18599118 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 962 232 61 11 chr17 66839362 66839500 -18598980 + AluJo SINE Alu 117 276 -36 2200 121 16 0 chr17 66839603 66839910 -18598570 + AluSx SINE Alu 1 312 0 627 196 128 7 chr17 66839955 66840103 -18598377 - AluJb SINE Alu -8 304 139 180 0 0 0 chr17 66840301 66840321 -18598159 + (A)n Simple_repeat Simple_repeat 1 20 0 231 103 0 0 chr17 66840656 66840695 -18597785 + (CA)n Simple_repeat Simple_repeat 1 39 0 1946 119 30 10 chr17 66841470 66841765 -18596715 - AluSq SINE Alu -12 301 1 758 147 0 0 chr17 66842221 66842337 -18596143 + AluJb SINE Alu 186 301 -11 2309 96 7 0 chr17 66842552 66842855 -18595625 + AluSp SINE Alu 1 305 -8 675 263 22 0 chr17 66843130 66843309 -18595171 + MIR SINE MIR 2 184 -78 293 109 18 0 chr17 66843395 66843450 -18595030 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 2019 147 3 19 chr17 66843681 66843995 -18594485 - AluJo SINE Alu -3 309 1 187 53 26 53 chr17 66844045 66844083 -18594397 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 2154 104 7 0 chr17 66844390 66844705 -18593775 + AluSg SINE Alu 1 317 0 2248 121 0 3 chr17 66845139 66845553 -18592927 - AluSx SINE Alu 0 413 1 2312 64 16 45 chr17 66845844 66846155 -18592325 - AluY SINE Alu -9 302 1 414 0 0 0 chr17 66846369 66846415 -18592065 + (CA)n Simple_repeat Simple_repeat 2 47 0 2298 232 78 58 chr17 66846604 66846992 -18591488 - L1M4 LINE L1 -2192 3954 3575 2270 99 0 3 chr17 66846992 66847284 -18591196 - AluSc SINE Alu -17 292 2 2298 232 78 58 chr17 66847284 66847297 -18591183 - L1M4 LINE L1 -2571 3575 3564 2150 87 14 4 chr17 66847297 66847607 -18590873 - AluSc SINE Alu 0 313 1 2298 232 78 58 chr17 66847607 66847885 -18590595 - L1M4 LINE L1 -2582 3564 3293 2383 101 0 3 chr17 66847885 66848193 -18590287 - AluSx SINE Alu 0 312 6 2298 232 78 58 chr17 66848193 66848673 -18589807 - L1M4 LINE L1 -2853 3293 2769 305 147 0 15 chr17 66848841 66848909 -18589571 + (TC)n Simple_repeat Simple_repeat 1 67 0 1686 166 25 54 chr17 66849320 66849634 -18588846 + AluJb SINE Alu 1 305 -7 325 75 0 0 chr17 66849634 66849674 -18588806 + Alu SINE Alu 1 40 -262 293 250 24 32 chr17 66849674 66849798 -18588682 - L1M4 LINE L1 -2112 4034 3912 21 57 0 0 chr17 66851538 66851573 -18586907 + GC_rich Low_complexity Low_complexity 1 35 0 193 106 21 21 chr17 66851634 66851681 -18586799 + (CGG)n Simple_repeat Simple_repeat 1 47 0 243 191 16 0 chr17 66851860 66851923 -18586557 + (CCG)n Simple_repeat Simple_repeat 1 64 0 224 52 17 69 chr17 66852102 66852160 -18586320 + (CGGGG)n Simple_repeat Simple_repeat 5 59 0 1878 125 6 56 chr17 66852782 66853103 -18585377 - AluJb SINE Alu -7 305 1 895 204 181 43 chr17 66853808 66853830 -18584650 + MLT1H LTR MaLR 195 213 -336 2337 96 0 3 chr17 66853830 66854133 -18584347 - AluSx SINE Alu -10 302 1 895 204 181 43 chr17 66854133 66854409 -18584071 + MLT1H LTR MaLR 213 534 -15 1777 164 37 0 chr17 66854461 66854759 -18583721 - AluJo SINE Alu -3 309 1 990 167 0 0 chr17 66854761 66854917 -18583563 - FRAM SINE Alu -10 156 1 423 300 20 0 chr17 66855020 66855170 -18583310 + MIR SINE MIR 8 160 -102 846 274 72 72 chr17 66855201 66855440 -18583040 + MLT1L LTR MaLR 15 253 -362 2049 152 0 7 chr17 66855440 66855749 -18582731 + AluJo SINE Alu 1 307 -5 846 274 72 72 chr17 66855749 66856020 -18582460 + MLT1L LTR MaLR 252 525 -90 2133 121 0 7 chr17 66856021 66856326 -18582154 + AluSx SINE Alu 1 303 -9 206 238 0 0 chr17 66856383 66856425 -18582055 + L2 LINE L2 3255 3296 -17 1195 164 70 0 chr17 66856572 66856773 -18581707 + MER58A DNA MER1_type 1 215 -9 2227 118 3 3 chr17 66856834 66857131 -18581349 + AluSx SINE Alu 1 297 -15 342 0 0 0 chr17 66857305 66857343 -18581137 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2280 75 0 0 chr17 66857346 66857625 -18580855 - AluSg SINE Alu -31 279 1 2189 116 3 0 chr17 66857871 66858165 -18580315 - AluSx SINE Alu -17 295 1 213 39 0 0 chr17 66858165 66858191 -18580289 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1511 148 95 27 chr17 66858191 66858454 -18580026 - AluJo SINE Alu -28 284 4 1143 105 0 0 chr17 66858488 66858631 -18579849 - AluSg/x SINE Alu -14 298 156 348 245 41 0 chr17 66858756 66858854 -18579626 - MIR SINE MIR -84 178 77 1408 209 76 71 chr17 66859621 66859710 -18578770 - L1MC4 LINE L1 -965 7077 6990 2349 108 0 0 chr17 66859710 66860006 -18578474 + AluSx SINE Alu 3 298 -14 1408 209 76 71 chr17 66860006 66860352 -18578128 - L1MC4 LINE L1 -1052 6990 6640 1844 131 4 0 chr17 66860369 66860621 -18577859 + AluSq SINE Alu 1 253 -60 2077 102 0 4 chr17 66860773 66861047 -18577433 - AluSg SINE Alu -37 273 1 422 209 191 0 chr17 66861260 66861375 -18577105 + MER5A DNA MER1_type 1 137 -52 752 174 8 0 chr17 66861625 66861757 -18576723 + FLAM_C SINE Alu 1 133 0 966 114 76 33 chr17 66862176 66862360 -18576120 + MER33 DNA MER1_type 31 222 -102 1521 197 9 25 chr17 66862360 66862675 -18575805 + AluSq SINE Alu 1 310 -3 573 92 0 73 chr17 66862675 66862839 -18575641 + (TA)n Simple_repeat Simple_repeat 1 152 0 300 175 0 0 chr17 66862859 66862916 -18575564 + MER33 DNA MER1_type 307 363 0 182 274 36 60 chr17 66863210 66863271 -18575209 + L3 LINE CR1 1477 1537 -40 1796 182 71 36 chr17 66863271 66863423 -18575057 + MLT1C LTR MaLR 1 146 -321 2246 117 7 0 chr17 66863423 66863723 -18574757 - AluSx SINE Alu -10 302 1 1796 182 71 36 chr17 66863723 66864020 -18574460 + MLT1C LTR MaLR 146 466 -1 182 274 36 60 chr17 66864020 66864042 -18574438 + L3 LINE CR1 1537 1558 -19 2166 97 19 19 chr17 66865229 66865538 -18572942 + AluSx SINE Alu 1 309 -3 1776 158 25 54 chr17 66866020 66866337 -18572143 + AluJb SINE Alu 1 308 -4 2347 90 0 19 chr17 66866337 66866647 -18571833 + AluSx SINE Alu 1 304 -8 2319 107 3 0 chr17 66866779 66867118 -18571362 + AluSp SINE Alu 1 340 0 725 206 7 26 chr17 66867119 66867274 -18571206 + AluJb SINE Alu 120 271 -41 375 78 0 0 chr17 66867278 66867329 -18571151 + (CA)n Simple_repeat Simple_repeat 2 52 0 202 225 56 56 chr17 66867696 66867712 -18570768 - L2 LINE L2 0 3272 3257 2042 117 0 3 chr17 66867712 66867995 -18570485 - AluSx SINE Alu -16 296 15 202 225 56 56 chr17 66867995 66868049 -18570431 - L2 LINE L2 -14 3258 3202 218 231 15 0 chr17 66868119 66868184 -18570296 + GA-rich Low_complexity Low_complexity 4 69 0 339 294 48 8 chr17 66868263 66868389 -18570091 + MER5A DNA MER1_type 58 188 -1 891 124 96 34 chr17 66868393 66868570 -18569910 - MER5A DNA MER1_type 0 189 2 2227 98 0 17 chr17 66868573 66868870 -18569610 + AluSx SINE Alu 1 292 -20 1351 149 5 11 chr17 66868881 66869101 -18569379 + MLT1D LTR MaLR 248 459 -46 1579 196 7 20 chr17 66869589 66869885 -18568595 - AluJb SINE Alu -16 296 5 189 0 0 0 chr17 66870031 66870052 -18568428 + (TC)n Simple_repeat Simple_repeat 2 22 0 1901 151 3 3 chr17 66870052 66870337 -18568143 - AluJo SINE Alu -27 285 1 1974 128 14 20 chr17 66870807 66871103 -18567377 - AluSx SINE Alu -17 295 2 351 178 79 40 chr17 66871239 66871340 -18567140 - MER89 LTR ERV1 -133 426 322 2301 115 0 0 chr17 66871376 66871681 -18566799 - AluSc SINE Alu -4 305 1 310 301 24 41 chr17 66872102 66872225 -18566255 - L1ME4a LINE L1 -164 5957 5837 1519 221 7 0 chr17 66872357 66872655 -18565825 + AluJo SINE Alu 1 300 -12 218 136 23 0 chr17 66872656 66872700 -18565780 + (TA)n Simple_repeat Simple_repeat 2 46 0 550 242 51 74 chr17 66872712 66872755 -18565725 - L1ME4a LINE L1 -287 5834 5792 2214 103 0 23 chr17 66872755 66873057 -18565423 + AluSq SINE Alu 1 295 -18 550 242 51 74 chr17 66873057 66873173 -18565307 - L1ME4a LINE L1 -329 5792 5675 1903 145 86 17 chr17 66873173 66873524 -18564956 - THE1C LTR MaLR 0 375 1 550 242 51 74 chr17 66873524 66873630 -18564850 - L1ME4a LINE L1 -446 5675 5557 2144 115 37 0 chr17 66874352 66874647 -18563833 - AluSx SINE Alu -6 306 1 2555 56 0 38 chr17 66874654 66874974 -18563506 - AluY SINE Alu -3 308 1 2246 127 0 0 chr17 66874974 66875272 -18563208 - AluSx SINE Alu -14 298 1 1232 94 0 6 chr17 66875277 66875447 -18563033 - AluY SINE Alu -8 303 135 199 256 103 51 chr17 66875486 66875564 -18562916 + MIR3 SINE MIR 118 199 -9 1588 173 6 38 chr17 66875579 66875892 -18562588 + AluSq SINE Alu 1 303 -10 1779 124 0 0 chr17 66876007 66876240 -18562240 - AluSq SINE Alu -80 233 1 345 312 0 0 chr17 66876281 66876374 -18562106 - L2 LINE L2 -531 2783 2691 2202 261 31 51 chr17 66876459 66876842 -18561638 + L2 LINE L2 2227 2616 -697 2159 119 33 0 chr17 66876842 66877144 -18561336 - AluSx SINE Alu 0 312 1 2202 261 31 51 chr17 66877144 66877864 -18560616 + L2 LINE L2 2616 3313 0 2272 124 0 0 chr17 66878700 66878999 -18559481 - AluSx SINE Alu -11 301 3 2202 95 61 7 chr17 66878999 66879294 -18559186 - AluSx SINE Alu -1 311 1 486 277 9 0 chr17 66880298 66880410 -18558070 + MER81 DNA DNA 2 114 0 190 203 27 40 chr17 66880661 66880735 -18557745 - L3 LINE CR1 -362 1215 1143 2101 124 0 0 chr17 66881212 66881485 -18556995 + AluSx SINE Alu 19 291 -21 2199 107 4 0 chr17 66881490 66881797 -18556683 + AluSq SINE Alu 1 308 0 2203 103 17 3 chr17 66881823 66882115 -18556365 + AluSq SINE Alu 3 298 -15 926 171 116 0 chr17 66882173 66882389 -18556091 + L1MC3 LINE L1 7017 7257 -528 431 287 118 7 chr17 66882458 66882594 -18555886 + MIR3 SINE MIR 4 154 -54 2027 165 0 13 chr17 66882606 66882922 -18555558 + AluJb SINE Alu 1 312 0 2201 108 0 45 chr17 66883119 66883433 -18555047 + AluSx SINE Alu 1 300 -12 2482 77 0 13 chr17 66884365 66884676 -18553804 + AluSx SINE Alu 1 307 -5 512 234 18 24 chr17 66884955 66885104 -18553376 - MIR SINE MIR -60 148 1 1628 83 8 79 chr17 66885239 66885493 -18552987 + AluSp SINE Alu 62 297 -16 251 317 42 14 chr17 66885906 66886048 -18552432 + ERVL LTR ERVL 780 925 -4071 1938 110 3 57 chr17 66886084 66886422 -18552058 + AluSx SINE Alu 1 322 0 330 300 47 29 chr17 66886540 66886710 -18551770 + ERVL LTR ERVL 4601 4773 -991 1128 86 0 0 chr17 66886725 66886865 -18551615 + AluSg1 SINE Alu 2 141 -168 270 217 0 109 chr17 66887297 66887352 -18551128 + L1ME3 LINE L1 6052 6095 -67 1822 163 28 0 chr17 66887352 66887635 -18550845 + AluSx SINE Alu 1 291 -21 270 217 0 109 chr17 66887635 66887671 -18550809 + L1ME3 LINE L1 6095 6133 -29 2170 116 3 0 chr17 66887701 66887993 -18550487 + AluSx SINE Alu 1 293 -19 2133 123 17 7 chr17 66888278 66888578 -18549902 + AluSx SINE Alu 1 303 -9 450 169 0 0 chr17 66888586 66888651 -18549829 + AluJ/FLAM SINE Alu 5 69 -243 1181 159 13 48 chr17 66889229 66889391 -18549089 - MER20 DNA MER1_type 0 219 66 2427 91 0 0 chr17 66889391 66889688 -18548792 + AluSq SINE Alu 1 297 -16 1181 159 13 48 chr17 66889688 66889752 -18548728 - MER20 DNA MER1_type -153 66 1 2204 115 7 0 chr17 66889775 66890070 -18548410 + AluSq SINE Alu 1 297 -16 186 43 0 0 chr17 66890893 66890916 -18547564 + (TA)n Simple_repeat Simple_repeat 2 24 0 2206 111 16 3 chr17 66891889 66892195 -18546285 + AluSg SINE Alu 1 310 0 2463 109 0 0 chr17 66892228 66892540 -18545940 + AluSx SINE Alu 1 312 0 307 239 69 62 chr17 66892760 66892890 -18545590 + L1ME4a LINE L1 5989 6119 -2 824 222 16 6 chr17 66892909 66893200 -18545280 + GA-rich Low_complexity Low_complexity 1 293 0 2354 111 3 0 chr17 66893363 66893670 -18544810 + AluSp SINE Alu 1 308 -5 776 165 0 8 chr17 66894495 66894616 -18543864 + FLAM_C SINE Alu 1 120 -23 227 209 0 75 chr17 66894763 66894830 -18543650 - MIR SINE MIR -194 68 7 629 131 0 0 chr17 66895848 66895947 -18542533 - AluSq SINE Alu 0 313 215 1215 103 0 7 chr17 66895951 66896106 -18542374 - AluSq SINE Alu -159 154 1 2232 110 7 0 chr17 66896675 66896974 -18541506 + AluSx SINE Alu 1 301 -11 1327 89 0 22 chr17 66896974 66897154 -18541326 + AluSq SINE Alu 134 309 -4 1760 108 24 64 chr17 66897840 66898137 -18540343 - AluSx SINE Alu 0 312 28 1683 75 0 0 chr17 66898137 66898337 -18540143 + AluSg/x SINE Alu 88 287 -22 1874 194 0 9 chr17 66898642 66898957 -18539523 - AluSx SINE Alu 0 312 1 2075 114 0 44 chr17 66898962 66899318 -18539162 - AluSx SINE Alu 0 343 1 604 226 29 0 chr17 66899333 66899574 -18538906 - L1MD3 LINE L1 -168 7827 7493 843 259 43 63 chr17 66900243 66900591 -18537889 + MER102b DNA MER1_type 1 341 0 242 228 9 132 chr17 66900610 66900724 -18537756 - L2 LINE L2 0 3272 3173 2021 144 24 0 chr17 66900842 66901134 -18537346 - AluSx SINE Alu -13 299 1 507 324 89 14 chr17 66901422 66901576 -18536904 + MIR SINE MIR 20 196 -66 1870 157 34 0 chr17 66901576 66901870 -18536610 - AluJb SINE Alu -8 304 1 507 324 89 14 chr17 66901870 66901928 -18536552 + MIR SINE MIR 196 248 -14 607 226 52 0 chr17 66901984 66902099 -18536381 - FRAM SINE Alu -54 122 2 1387 201 58 58 chr17 66902102 66902199 -18536281 - L1MD2 LINE L1 -227 6132 6036 1766 191 3 22 chr17 66902199 66902514 -18535966 + AluSx SINE Alu 1 309 -3 1387 201 58 58 chr17 66902514 66902621 -18535859 - L1MD2 LINE L1 -323 6036 5930 2318 121 0 0 chr17 66902621 66902928 -18535552 + AluSx SINE Alu 1 307 -5 2397 87 3 3 chr17 66902932 66903232 -18535248 + AluSc SINE Alu 1 300 -9 1387 201 58 58 chr17 66903232 66903433 -18535047 - L1MD2 LINE L1 -431 5928 5721 1383 240 84 26 chr17 66903433 66903887 -18534593 + MLT2B1 LTR ERVL 1 480 -40 1747 143 52 21 chr17 66903953 66904089 -18534391 - AluJb SINE Alu -17 295 165 2064 143 3 3 chr17 66904089 66904390 -18534090 - AluJb SINE Alu -11 301 1 1747 143 52 21 chr17 66904390 66904539 -18533941 - AluJb SINE Alu -147 165 1 494 104 80 0 chr17 66904544 66904707 -18533773 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 207 258 39 8 chr17 66904710 66904838 -18533642 + (TA)n Simple_repeat Simple_repeat 2 133 0 294 132 75 0 chr17 66904849 66904902 -18533578 + MLT2B1 LTR ERVL 459 515 0 1034 169 0 0 chr17 66904903 66905081 -18533399 - L1MD2 LINE L1 -635 5724 5547 814 163 0 22 chr17 66905722 66905857 -18532623 - FLAM_C SINE Alu 0 133 2 191 61 30 0 chr17 66905942 66905975 -18532505 + (TA)n Simple_repeat Simple_repeat 2 35 0 791 176 0 0 chr17 66905975 66906100 -18532380 - FLAM_C SINE Alu -8 125 1 975 201 0 6 chr17 66906311 66906485 -18531995 - AluJb SINE Alu -6 306 134 2362 109 0 0 chr17 66906485 66906798 -18531682 - AluSq SINE Alu 0 313 1 192 77 0 0 chr17 66906809 66906835 -18531645 + (TTCC)n Simple_repeat Simple_repeat 2 27 0 * 246 105 0 0 chr17 66906829 66906867 -18531613 + (TC)n Simple_repeat Simple_repeat 1 38 0 784 216 37 37 chr17 66906867 66907057 -18531423 - AluJb SINE Alu 0 312 123 1881 128 14 54 chr17 66907224 66907541 -18530939 + AluSx SINE Alu 1 305 0 3259 152 14 24 chr17 66907860 66908454 -18530026 - L1MB7 LINE L1 -16 6168 5581 204 40 0 0 chr17 66908481 66908506 -18529974 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 2373 103 3 0 chr17 66908512 66908824 -18529656 + AluSp SINE Alu 1 313 0 969 142 14 0 chr17 66908867 66909015 -18529465 + AluSg/x SINE Alu 158 307 -3 974 315 115 11 chr17 66909035 66910034 -18528446 - L1ME2 LINE L1 -298 5866 4768 1902 126 3 52 chr17 66910034 66910344 -18528136 - AluJb SINE Alu -17 295 1 235 133 0 0 chr17 66910346 66910391 -18528089 - L1ME2 LINE L1 -1721 4425 4381 2286 114 7 0 chr17 66910394 66910702 -18527778 - AluSx SINE Alu -2 310 1 244 344 61 0 chr17 66910710 66910841 -18527639 - L1ME2 LINE L1 -2026 4120 3982 2339 98 0 0 chr17 66910879 66911175 -18527305 - AluSg SINE Alu -14 296 1 966 115 0 0 chr17 66911179 66911309 -18527171 - AluSg SINE Alu -180 130 1 278 239 0 0 chr17 66911323 66911390 -18527090 - L1ME2 LINE L1 -2203 3943 3877 251 309 18 9 chr17 66911455 66911565 -18526915 - LTR67 LTR ERVL -4 553 443 1164 135 0 11 chr17 66911720 66911898 -18526582 - AluSg/x SINE Alu 0 310 135 247 196 0 0 chr17 66911950 66912001 -18526479 - LTR67 LTR ERVL -502 55 5 1297 132 0 0 chr17 66912261 66912443 -18526037 - AluSg/x SINE Alu -1 311 130 10437 52 16 8 chr17 66912458 66913740 -18524740 - SVA Other Other 0 1386 94 296 283 62 29 chr17 67113912 67114019 -18324461 + L1ME4a LINE L1 5852 5954 -167 2062 125 21 7 chr17 67114019 67114306 -18324174 - AluSx SINE Alu -21 291 1 296 283 62 29 chr17 67114306 67114438 -18324042 + L1ME4a LINE L1 5954 6099 -22 254 259 77 56 chr17 67114477 67114563 -18323917 + L1ME4a LINE L1 5955 6047 -74 2040 128 10 0 chr17 67114563 67114877 -18323603 - AluSx SINE Alu 0 312 2 254 259 77 56 chr17 67114877 67114933 -18323547 + L1ME4a LINE L1 6047 6100 -21 2379 79 0 55 chr17 67115101 67115429 -18323051 + AluSg SINE Alu 1 310 0 586 348 117 53 chr17 67115652 67115985 -18322495 + L3 LINE CR1 834 1217 -360 1973 124 57 10 chr17 67115985 67116283 -18322197 + AluSx SINE Alu 1 312 0 586 348 117 53 chr17 67116283 67116498 -18321982 + L3 LINE CR1 1217 1417 -160 274 242 50 30 chr17 67116504 67116603 -18321877 + MER5A DNA MER1_type 4 104 -85 2218 121 3 13 chr17 67116629 67116942 -18321538 + AluSq SINE Alu 1 310 -3 2128 132 0 0 chr17 67116992 67117279 -18321201 - AluSx SINE Alu -25 287 1 2030 101 87 0 chr17 67117393 67117669 -18320811 - AluSc SINE Alu -9 300 1 301 226 140 11 chr17 67118424 67118517 -18319963 - L1ME LINE L1 -326 5795 5691 308 272 107 0 chr17 67118606 67118709 -18319771 - MIR SINE MIR -147 115 2 1905 149 13 10 chr17 67118711 67119020 -18319460 - AluJo SINE Alu -2 310 1 570 231 56 19 chr17 67119024 67119240 -18319240 - L1ME LINE L1 -2331 5477 5254 382 334 111 50 chr17 67119258 67119276 -18319204 - L1ME LINE L1 -913 5233 5218 2413 95 0 3 chr17 67119276 67119580 -18318900 + AluSq SINE Alu 1 303 -10 382 334 111 50 chr17 67119580 67119920 -18318560 - L1ME LINE L1 -928 5218 4853 2285 116 0 0 chr17 67120385 67120687 -18317793 - AluY SINE Alu -9 302 1 2164 104 7 0 chr17 67120783 67121106 -18317374 + AluSg SINE Alu 1 325 0 2278 121 0 3 chr17 67121540 67121954 -18316526 - AluSx SINE Alu 0 413 1 2323 64 16 45 chr17 67122245 67122556 -18315924 - AluY SINE Alu -9 302 1 396 0 0 0 chr17 67122770 67122814 -18315666 + (CA)n Simple_repeat Simple_repeat 2 45 0 2374 82 3 7 chr17 67122992 67123297 -18315183 + AluSx SINE Alu 1 304 -8 1971 147 7 7 chr17 67123306 67123606 -18314874 + AluSx SINE Alu 1 300 -12 2266 115 3 3 chr17 67123784 67124096 -18314384 - AluSx SINE Alu 0 312 1 646 215 99 21 chr17 67124114 67124305 -18314175 - L2 LINE L2 -1 3312 3107 693 255 7 0 chr17 67124305 67124458 -18314022 + MLT1A1 LTR MaLR 171 324 -41 583 292 99 16 chr17 67124460 67124703 -18313777 - L2 LINE L2 -189 3124 2862 1033 192 0 0 chr17 67124703 67124880 -18313600 + AluSg/x SINE Alu 131 307 -5 276 248 62 47 chr17 67124980 67125044 -18313436 - L1ME3A LINE L1 -5 6165 6103 2053 141 3 3 chr17 67125044 67125341 -18313139 - AluJb SINE Alu -15 297 1 276 248 62 47 chr17 67125341 67125405 -18313075 - L1ME3A LINE L1 -67 6103 6035 1803 111 0 0 chr17 67125409 67125644 -18312836 + AluSx SINE Alu 2 236 -76 249 33 0 0 chr17 67125645 67125675 -18312805 + (A)n Simple_repeat Simple_repeat 1 30 0 2294 105 7 0 chr17 67125691 67125997 -18312483 + AluSq SINE Alu 1 308 -5 1130 251 81 6 chr17 67126068 67126385 -18312095 - L1ME3A LINE L1 -215 5955 5607 2113 134 0 26 chr17 67126385 67126692 -18311788 - AluSx SINE Alu -13 299 1 1130 251 81 6 chr17 67126692 67126732 -18311748 - L1ME3A LINE L1 -563 5607 5571 345 312 0 0 chr17 67126733 67126826 -18311654 - L2 LINE L2 -531 2783 2691 2202 258 30 53 chr17 67126911 67127294 -18311186 + L2 LINE L2 2227 2617 -696 2159 119 33 0 chr17 67127294 67127596 -18310884 - AluSx SINE Alu 0 312 1 2202 258 30 53 chr17 67127596 67128316 -18310164 + L2 LINE L2 2617 3313 0 2272 124 0 0 chr17 67129152 67129451 -18309029 - AluSx SINE Alu -11 301 3 2204 95 61 7 chr17 67129459 67129755 -18308725 - AluSx SINE Alu 0 312 1 486 277 9 0 chr17 67130758 67130870 -18307610 + MER81 DNA DNA 2 114 0 190 203 27 40 chr17 67131121 67131195 -18307285 - L3 LINE CR1 -362 1215 1143 2101 124 0 0 chr17 67131672 67131945 -18306535 + AluSx SINE Alu 19 291 -21 2199 107 4 0 chr17 67131950 67132257 -18306223 + AluSq SINE Alu 1 308 0 2203 103 17 3 chr17 67132283 67132575 -18305905 + AluSq SINE Alu 3 298 -15 926 171 116 0 chr17 67132633 67132849 -18305631 + L1MC3 LINE L1 7017 7257 -528 452 279 118 7 chr17 67132918 67133054 -18305426 + MIR3 SINE MIR 4 154 -54 1994 168 0 13 chr17 67133066 67133382 -18305098 + AluJb SINE Alu 1 312 0 2197 108 0 45 chr17 67133579 67133893 -18304587 + AluSx SINE Alu 1 300 -12 2472 77 0 13 chr17 67134826 67135136 -18303344 + AluSx SINE Alu 1 306 -6 512 234 18 24 chr17 67135415 67135564 -18302916 - MIR SINE MIR -60 148 1 1643 82 8 78 chr17 67135699 67135955 -18302525 + AluSp SINE Alu 62 299 -14 251 317 42 14 chr17 67136368 67136510 -18301970 + ERVL LTR ERVL 780 925 -4071 1938 110 3 57 chr17 67136546 67136884 -18301596 + AluSx SINE Alu 1 322 0 330 300 47 29 chr17 67137002 67137172 -18301308 + ERVL LTR ERVL 4601 4773 -991 1701 113 20 134 chr17 67137187 67137344 -18301136 + AluYb8 SINE Alu 2 101 -207 11039 51 15 11 chr17 67137344 67138724 -18299756 + SVA Other Other 1 1386 0 1701 113 20 134 chr17 67138724 67138910 -18299570 + AluYb8 SINE Alu 101 306 -2 247 196 0 0 chr17 67139183 67139234 -18299246 + LTR67 LTR ERVL 5 55 -502 1151 140 0 11 chr17 67139286 67139464 -18299016 + AluSg/x SINE Alu 137 312 0 251 309 18 9 chr17 67139619 67139729 -18298751 + LTR67 LTR ERVL 443 553 -4 278 239 0 0 chr17 67139794 67139861 -18298619 + L1ME2 LINE L1 3877 3943 -2203 999 108 0 0 chr17 67139875 67140005 -18298475 + AluSg SINE Alu 1 130 -180 2360 95 0 0 chr17 67140009 67140305 -18298175 + AluSg SINE Alu 1 296 -14 244 344 61 0 chr17 67140343 67140474 -18298006 + L1ME2 LINE L1 3982 4120 -2026 2313 110 7 0 chr17 67140482 67140790 -18297690 + AluSx SINE Alu 1 310 -2 235 133 0 0 chr17 67140793 67140838 -18297642 + L1ME2 LINE L1 4381 4425 -1721 1902 126 3 52 chr17 67140840 67141150 -18297330 + AluJb SINE Alu 1 295 -17 986 314 101 13 chr17 67141150 67142149 -18296331 + L1ME2 LINE L1 4768 5866 -298 925 142 14 7 chr17 67142169 67142317 -18296163 - AluSg/x SINE Alu -3 306 158 2373 103 3 0 chr17 67142358 67142670 -18295810 - AluSp SINE Alu 0 313 1 204 40 0 0 chr17 67142676 67142701 -18295779 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 3259 152 14 24 chr17 67142728 67143322 -18295158 + L1MB7 LINE L1 5581 6168 -16 1886 129 14 51 chr17 67143641 67143957 -18294523 - AluSx SINE Alu 0 305 1 780 216 37 37 chr17 67144124 67144314 -18294166 + AluJb SINE Alu 123 312 0 246 105 0 0 chr17 67144314 67144352 -18294128 + (GA)n Simple_repeat Simple_repeat 1 38 0 192 77 0 0 chr17 67144346 67144372 -18294108 + (GGAA)n Simple_repeat Simple_repeat 2 27 0 * 2348 109 0 0 chr17 67144383 67144696 -18293784 + AluSq SINE Alu 1 313 0 991 199 0 6 chr17 67144696 67144872 -18293608 + AluJb SINE Alu 134 308 -4 841 160 0 0 chr17 67145083 67145208 -18293272 + FLAM_C SINE Alu 1 125 -8 191 61 30 0 chr17 67145208 67145241 -18293239 + (TA)n Simple_repeat Simple_repeat 2 35 0 814 163 0 22 chr17 67145326 67145461 -18293019 + FLAM_C SINE Alu 2 133 0 1034 169 0 0 chr17 67146102 67146280 -18292200 + L1MD2 LINE L1 5547 5724 -635 294 132 75 0 chr17 67146281 67146334 -18292146 - MLT2B1 LTR ERVL 0 515 459 214 250 31 16 chr17 67146345 67146473 -18292007 + (TA)n Simple_repeat Simple_repeat 2 131 0 494 104 80 0 chr17 67146476 67146639 -18291841 + (TATAA)n Simple_repeat Simple_repeat 5 180 0 1773 140 52 21 chr17 67146644 67146793 -18291687 + AluJb SINE Alu 1 144 -168 2064 143 3 3 chr17 67146793 67147094 -18291386 + AluJb SINE Alu 1 301 -11 1773 140 52 21 chr17 67147094 67147230 -18291250 + AluJb SINE Alu 144 295 -17 1548 203 99 42 chr17 67147296 67147750 -18290730 - MLT2B1 LTR ERVL -40 480 1 1387 201 58 58 chr17 67147750 67147951 -18290529 + L1MD2 LINE L1 5721 5921 -438 2410 83 3 3 chr17 67147951 67148251 -18290229 - AluSc SINE Alu -9 300 1 2327 120 0 0 chr17 67148255 67148563 -18289917 - AluSx SINE Alu -4 308 1 1387 201 58 58 chr17 67148563 67148670 -18289810 + L1MD2 LINE L1 5924 6037 -322 1766 191 3 22 chr17 67148670 67148985 -18289495 - AluSx SINE Alu -3 309 1 1387 201 58 58 chr17 67148985 67149082 -18289398 + L1MD2 LINE L1 6036 6132 -227 607 226 52 0 chr17 67149085 67149200 -18289280 + FRAM SINE Alu 2 122 -54 507 324 89 14 chr17 67149256 67149314 -18289166 - MIR SINE MIR -14 248 196 1870 157 34 0 chr17 67149314 67149608 -18288872 + AluJb SINE Alu 1 304 -8 507 324 89 14 chr17 67149608 67149762 -18288718 - MIR SINE MIR -66 196 20 2021 144 24 0 chr17 67150050 67150342 -18288138 + AluSx SINE Alu 1 299 -13 242 228 9 132 chr17 67150460 67150574 -18287906 + L2 LINE L2 3173 3272 0 843 259 43 63 chr17 67150593 67150941 -18287539 - MER102b DNA MER1_type 0 341 1 604 226 29 0 chr17 67151610 67151851 -18286629 + L1MD3 LINE L1 7493 7827 -168 2054 118 0 44 chr17 67151866 67152222 -18286258 + AluSx SINE Alu 1 343 0 1921 196 0 0 chr17 67152227 67152539 -18285941 + AluSx SINE Alu 1 312 0 304 91 0 0 chr17 67152539 67152583 -18285897 + L1MB2 LINE L1 6118 6161 -10 2184 129 3 0 chr17 67152584 67152878 -18285602 - AluSx SINE Alu -17 295 1 1307 215 66 73 chr17 67152895 67153246 -18285234 + L1MC4 LINE L1 6640 6989 -1053 2369 108 0 0 chr17 67153246 67153542 -18284938 - AluSx SINE Alu -14 298 3 1307 215 66 73 chr17 67153542 67153631 -18284849 + L1MC4 LINE L1 6989 7077 -965 398 245 41 0 chr17 67154398 67154496 -18283984 + MIR SINE MIR 77 178 -84 1141 108 0 32 chr17 67154621 67154779 -18283701 + AluSg/x SINE Alu 156 308 -4 1532 148 95 27 chr17 67154798 67155087 -18283393 + AluJo SINE Alu 4 310 0 2209 116 3 0 chr17 67155087 67155381 -18283099 + AluSx SINE Alu 1 295 -17 2290 78 0 0 chr17 67155627 67155953 -18282527 + AluSg SINE Alu 1 326 0 543 234 30 70 chr17 67156032 67156102 -18282378 + MIR SINE MIR 73 144 -118 2292 89 3 3 chr17 67156102 67156395 -18282085 - AluSq SINE Alu -20 293 1 543 234 30 70 chr17 67156395 67156528 -18281952 + MIR SINE MIR 144 261 -1 2195 151 0 0 chr17 67156667 67156979 -18281501 - AluSx SINE Alu 0 312 1 187 53 26 53 chr17 67157496 67157534 -18280946 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 2058 146 3 19 chr17 67157584 67157899 -18280581 + AluJo SINE Alu 1 310 -2 293 109 18 0 chr17 67158130 67158185 -18280295 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 756 271 21 0 chr17 67158262 67158450 -18280030 - MIR SINE MIR -69 193 2 2333 96 7 0 chr17 67158725 67159028 -18279452 - AluSp SINE Alu -8 305 1 2213 127 7 0 chr17 67159243 67159542 -18278938 - AluJb SINE Alu -11 301 1 365 200 0 95 chr17 67159542 67159610 -18278870 + L1ME3 LINE L1 6039 6095 -67 1822 163 28 0 chr17 67159610 67159893 -18278587 + AluSx SINE Alu 1 291 -21 365 200 0 95 chr17 67159893 67159929 -18278551 + L1ME3 LINE L1 6095 6133 -29 2170 116 3 0 chr17 67159959 67160251 -18278229 + AluSx SINE Alu 1 293 -19 2133 123 17 7 chr17 67160536 67160836 -18277644 + AluSx SINE Alu 1 303 -9 450 169 0 0 chr17 67160844 67160909 -18277571 + AluJ/FLAM SINE Alu 5 69 -243 1181 159 13 48 chr17 67161487 67161649 -18276831 - MER20 DNA MER1_type 0 219 66 2427 91 0 0 chr17 67161649 67161946 -18276534 + AluSq SINE Alu 1 297 -16 1181 159 13 48 chr17 67161946 67162010 -18276470 - MER20 DNA MER1_type -153 66 1 2204 115 7 0 chr17 67162033 67162328 -18276152 + AluSq SINE Alu 1 297 -16 200 229 0 16 chr17 67163164 67163225 -18275255 + (TA)n Simple_repeat Simple_repeat 2 61 0 2214 111 16 3 chr17 67164160 67164466 -18274014 + AluSg SINE Alu 1 310 0 2471 109 0 0 chr17 67164499 67164811 -18273669 + AluSx SINE Alu 1 312 0 307 239 69 62 chr17 67165031 67165161 -18273319 + L1ME4a LINE L1 5989 6119 -2 814 182 20 3 chr17 67165180 67165477 -18273003 + GA-rich Low_complexity Low_complexity 1 302 0 2378 110 3 0 chr17 67165630 67165939 -18272541 + AluSp SINE Alu 1 310 -3 723 165 0 8 chr17 67166764 67166885 -18271595 + FLAM_C SINE Alu 1 120 -23 205 224 0 75 chr17 67167032 67167099 -18271381 - MIR SINE MIR -194 68 7 598 131 0 0 chr17 67168117 67168216 -18270264 - AluSq SINE Alu 0 313 215 1220 103 0 7 chr17 67168220 67168375 -18270105 - AluSq SINE Alu -159 154 1 2285 110 3 0 chr17 67168944 67169244 -18269236 + AluSx SINE Alu 1 301 -11 1332 89 0 22 chr17 67169244 67169424 -18269056 + AluSq SINE Alu 134 309 -4 1773 108 24 64 chr17 67170110 67170407 -18268073 - AluSx SINE Alu 0 312 28 1692 75 0 0 chr17 67170407 67170607 -18267873 + AluSg/x SINE Alu 88 287 -22 228 225 56 28 chr17 67170849 67170920 -18267560 + MLT1L LTR MaLR 219 291 -324 26 30 0 0 chr17 67171372 67171405 -18267075 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr17 67172962 67172990 -18265490 + AT_rich Low_complexity Low_complexity 1 28 0 233 350 61 43 chr17 67173546 67173595 -18264885 + MER5B DNA MER1_type 1 48 -130 2604 71 0 0 chr17 67173595 67173906 -18264574 - AluY SINE Alu 0 311 1 233 350 61 43 chr17 67173906 67174019 -18264461 + MER5B DNA MER1_type 48 166 -12 229 229 169 36 chr17 67174108 67174274 -18264206 + L1MC5 LINE L1 7674 7861 -100 2335 74 13 10 chr17 67174301 67174599 -18263881 - AluSq SINE Alu -14 299 1 2316 91 3 17 chr17 67174759 67175055 -18263425 - AluSq SINE Alu -21 292 1 2166 78 7 14 chr17 67176155 67176438 -18262042 - AluSx SINE Alu -20 292 12 926 139 17 87 chr17 67176607 67176780 -18261700 + AluJo SINE Alu 1 161 -151 2096 92 7 0 chr17 67176988 67177261 -18261219 + AluSq SINE Alu 1 275 -38 2130 122 3 7 chr17 67177657 67177951 -18260529 + AluSx SINE Alu 1 293 -19 2137 102 3 33 chr17 67178073 67178376 -18260104 - AluSq SINE Alu -19 294 1 1932 168 3 0 chr17 67178386 67178678 -18259802 - AluJo SINE Alu -18 294 2 656 167 0 0 chr17 67178688 67178802 -18259678 - AluSp/q SINE Alu -6 307 194 2159 139 0 0 chr17 67179008 67179310 -18259170 + AluSg SINE Alu 1 302 -8 241 182 78 26 chr17 67180192 67180252 -18258228 - Charlie5 DNA MER1_type 0 2624 2557 2130 128 0 0 chr17 67180252 67180553 -18257927 - AluSx SINE Alu 0 301 1 241 182 78 26 chr17 67180553 67180568 -18257912 - Charlie5 DNA MER1_type -67 2557 2544 325 343 82 24 chr17 67180581 67180642 -18257838 - L1M4 LINE L1 -2199 3947 3891 2107 137 10 10 chr17 67180642 67180948 -18257532 - AluSx SINE Alu -6 306 1 325 343 82 24 chr17 67180948 67181093 -18257387 - L1M4 LINE L1 -2255 3891 3729 30 0 0 0 chr17 67181112 67181142 -18257338 + AT_rich Low_complexity Low_complexity 1 30 0 231 167 17 67 chr17 67181488 67181548 -18256932 - L1M1 LINE L1 -7498 67 11 517 274 194 13 chr17 67181656 67182047 -18256433 - L1M4 LINE L1 -2833 3313 2852 409 223 189 34 chr17 67182195 67182343 -18256137 - L1PB4 LINE L1 0 6166 5996 431 359 91 24 chr17 67182349 67182678 -18255802 - L1ME3A LINE L1 -289 5881 5531 1483 176 4 4 chr17 67182678 67182922 -18255558 + AluJo SINE Alu 17 260 -52 1334 121 0 0 chr17 67182932 67183114 -18255366 + AluSg/x SINE Alu 127 308 -2 271 302 23 70 chr17 67184279 67184408 -18254072 - MIR SINE MIR -6 256 134 564 238 82 70 chr17 67184553 67184639 -18253841 - MER112 DNA MER1_type -12 248 165 2133 120 0 10 chr17 67184639 67184930 -18253550 + AluSc SINE Alu 1 288 -21 564 238 82 70 chr17 67184930 67185087 -18253393 - MER112 DNA MER1_type -95 165 2 313 248 4 87 chr17 67185631 67185781 -18252699 - L1MC4 LINE L1 -1332 6990 1995 1014 139 7 0 chr17 67185781 67185932 -18252548 + AluSq SINE Alu 130 281 -32 186 71 0 0 chr17 67185934 67185962 -18252518 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1147 212 77 63 chr17 67186111 67186555 -18251925 - LTR7 LTR ERV1 0 450 1 387 285 80 31 chr17 67187106 67187393 -18251087 + L1MC5 LINE L1 7505 7877 -165 233 0 62 0 chr17 67187405 67187437 -18251043 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 2325 100 0 0 chr17 67187568 67187859 -18250621 + AluSx SINE Alu 7 297 -15 2005 140 31 0 chr17 67187867 67188153 -18250327 + AluSx SINE Alu 1 295 -17 856 163 0 16 chr17 67188208 67188337 -18250143 - FLAM_C SINE Alu -16 127 1 29 0 0 0 chr17 67188352 67188381 -18250099 + AT_rich Low_complexity Low_complexity 1 29 0 1019 150 0 0 chr17 67188429 67188576 -18249904 + AluJb SINE Alu 156 302 -10 303 264 22 149 chr17 67189431 67189707 -18248773 + L1MC4a LINE L1 4864 5104 -1042 214 216 36 9 chr17 67189737 67189848 -18248632 + (TA)n Simple_repeat Simple_repeat 1 114 0 1196 258 79 51 chr17 67189863 67190518 -18247962 + L1MC4a LINE L1 5100 5777 -750 321 374 36 18 chr17 67190635 67190801 -18247679 + L1MC4a LINE L1 5891 6059 -1749 2026 151 0 10 chr17 67191207 67191506 -18246974 + AluJb SINE Alu 1 296 -16 2272 131 0 0 chr17 67191885 67192191 -18246289 + AluSx SINE Alu 1 306 -6 1272 134 0 51 chr17 67192217 67192433 -18246047 + AluJb SINE Alu 91 295 -17 649 284 41 110 chr17 67192475 67192929 -18245551 + L1M4 LINE L1 2263 2674 -3472 2101 126 0 0 chr17 67192929 67193214 -18245266 + AluSx SINE Alu 26 310 -2 649 284 41 110 chr17 67193214 67193315 -18245165 + L1M4 LINE L1 2674 2780 -3366 186 43 0 0 chr17 67193603 67193626 -18244854 + (CATAT)n Simple_repeat Simple_repeat 4 26 0 292 244 126 22 chr17 67193629 67193764 -18244716 + L2 LINE L2 3125 3273 -40 1312 80 75 24 chr17 67194622 67194835 -18243645 + L1PB1 LINE L1 5928 6151 0 244 250 31 10 chr17 67196125 67196221 -18242259 + MIR SINE MIR 30 127 -81 280 287 172 0 chr17 67196276 67196398 -18242082 + L2 LINE L2 3108 3250 -22 318 258 34 0 chr17 67197657 67197754 -18240726 - MIR SINE MIR -63 145 56 260 262 29 29 chr17 67198832 67198935 -18239545 - MIR3 SINE MIR -39 169 67 207 0 0 0 chr17 67199164 67199187 -18239293 + (A)n Simple_repeat Simple_repeat 1 23 0 934 239 85 22 chr17 67199281 67199599 -18238881 - MER46C DNA MER2_type 0 338 1 268 231 274 0 chr17 67200508 67200625 -18237855 + MIR3 SINE MIR 44 192 -16 21 0 0 0 chr17 67201103 67201124 -18237356 + GC_rich Low_complexity Low_complexity 1 21 0 256 259 0 25 chr17 67202686 67202767 -18235713 + C-rich Low_complexity Low_complexity 4 82 0 354 274 145 34 chr17 67203886 67204065 -18234415 + MIR SINE MIR 34 232 -30 2225 113 7 0 chr17 67204079 67204379 -18234101 - AluSx SINE Alu -7 305 4 1051 65 16 0 chr17 67204483 67204607 -18233873 + AluSg/x SINE Alu 162 287 -23 391 284 84 37 chr17 67206793 67206983 -18231497 + MER112 DNA MER1_type 13 211 -49 2004 107 52 0 chr17 67207003 67207297 -18231183 - AluSx SINE Alu 0 308 1 297 237 48 53 chr17 67208809 67208935 -18229545 + MIR SINE MIR 40 165 -43 874 236 49 0 chr17 67209023 67209226 -18229254 - MIR SINE MIR -36 226 14 2261 117 3 0 chr17 67210628 67210935 -18227545 - AluSx SINE Alu -4 308 1 223 317 106 8 chr17 67210939 67211062 -18227418 + L2 LINE L2 2687 2821 -493 243 209 30 45 chr17 67211410 67211477 -18227003 + L2 LINE L2 3014 3079 -193 254 279 59 0 chr17 67211583 67211651 -18226829 - MIR SINE MIR -63 145 74 300 275 126 18 chr17 67212819 67213041 -18225439 + L2 LINE L2 2811 3056 -216 214 414 8 0 chr17 67213236 67213369 -18225111 + L2 LINE L2 3139 3272 0 330 300 0 0 chr17 67213489 67213669 -18224811 + (TG)n Simple_repeat Simple_repeat 1 180 0 553 268 8 0 chr17 67214002 67214129 -18224351 - MIR SINE MIR -62 146 19 411 293 42 24 chr17 67214495 67214662 -18223818 - MIR SINE MIR -2 260 91 394 254 110 24 chr17 67214838 67215005 -18223475 - L1 LINE L1 -1697 4449 4280 487 264 53 13 chr17 67215005 67215176 -18223304 + MIR SINE MIR 1 174 -62 230 304 10 49 chr17 67215258 67215360 -18223120 + MIR SINE MIR 164 261 -1 2363 97 7 3 chr17 67216010 67216319 -18222161 - AluSp SINE Alu -3 310 1 362 192 154 19 chr17 67216904 67217008 -18221472 - MIR SINE MIR -80 182 65 352 299 102 20 chr17 67217020 67217314 -18221166 + L1ME4a LINE L1 5793 6110 -11 557 249 6 0 chr17 67217468 67217645 -18220835 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 621 272 2 0 chr17 67217694 67218217 -18220263 + (CCTA)n Simple_repeat Simple_repeat 1 524 0 398 227 17 25 chr17 67218223 67218342 -18220138 + (TCTA)n Simple_repeat Simple_repeat 2 119 0 551 284 62 6 chr17 67218934 67219110 -18219370 - MIR SINE MIR -75 187 2 249 384 40 0 chr17 67219506 67219631 -18218849 + MIR SINE MIR 63 192 -70 812 168 0 0 chr17 67220308 67220427 -18218053 + AluJb SINE Alu 1 119 -193 207 0 0 0 chr17 67220429 67220452 -18218028 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 695 196 5 85 chr17 67220459 67220648 -18217832 + MIR SINE MIR 57 230 -32 728 249 69 5 chr17 67220751 67220940 -18217540 - MER3 DNA MER1_type -8 201 1 2328 270 205 17 chr17 67222450 67222855 -18215625 + L2 LINE L2 1360 1687 -1626 2192 101 10 13 chr17 67222855 67223153 -18215327 + AluSx SINE Alu 1 297 -15 2328 270 205 17 chr17 67223153 67224390 -18214090 + L2 LINE L2 1687 3311 -2 1793 174 38 0 chr17 67224908 67225201 -18213279 + AluSx SINE Alu 1 304 -8 1501 142 0 13 chr17 67225238 67225289 -18213191 + AluSg/x SINE Alu 85 135 -177 2290 113 3 0 chr17 67225289 67225598 -18212882 + AluSp SINE Alu 1 310 -3 1501 142 0 13 chr17 67225598 67225772 -18212708 + AluSg/x SINE Alu 135 307 -5 2355 100 0 13 chr17 67226484 67226793 -18211687 - AluSx SINE Alu -7 305 1 3212 168 14 26 chr17 67226815 67226872 -18211608 - L1MB7 LINE L1 -15 6169 6113 1915 143 16 36 chr17 67226872 67227180 -18211300 + AluJb SINE Alu 1 302 -10 3212 168 14 26 chr17 67227180 67227787 -18210693 - L1MB7 LINE L1 -71 6113 5513 1761 201 26 21 chr17 67227818 67227874 -18210606 - L1MB7 LINE L1 -803 5343 5289 1373 160 93 146 chr17 67227874 67228288 -18210192 + MLT1C LTR MaLR 1 435 -32 2115 134 17 0 chr17 67228288 67228580 -18209900 - AluSx SINE Alu -15 297 1 1904 153 7 7 chr17 67228582 67228877 -18209603 - AluJb SINE Alu -16 296 2 2437 84 0 10 chr17 67228885 67229195 -18209285 - AluY SINE Alu -4 307 1 1373 160 93 146 chr17 67229195 67229261 -18209219 + MLT1C LTR MaLR 443 467 0 1761 201 26 21 chr17 67229261 67229631 -18208849 - L1MB7 LINE L1 -857 5289 4915 2005 145 0 14 chr17 67230815 67231112 -18207368 + AluSx SINE Alu 5 297 -15 2227 138 0 0 chr17 67231390 67231701 -18206779 - AluSx SINE Alu -1 311 1 306 264 88 11 chr17 67232265 67232356 -18206124 + L2 LINE L2 3174 3271 -1 291 228 0 0 chr17 67232818 67232875 -18205605 - AluS SINE Alu -251 57 1 591 253 58 58 chr17 67233114 67233375 -18205105 - L2 LINE L2 -9 3304 3044 2087 140 0 3 chr17 67233435 67233727 -18204753 + AluSx SINE Alu 1 291 -21 2201 243 48 14 chr17 67234168 67235078 -18203402 + L1ME3 LINE L1 4895 5830 -332 1125 143 6 0 chr17 67235094 67235255 -18203225 - AluJo SINE Alu -150 162 1 790 189 86 0 chr17 67235255 67235441 -18203039 - MER33 DNA MER1_type -248 76 1 26 0 0 27 chr17 67235486 67235505 -18202975 + AT_rich Low_complexity Low_complexity 1 20 -16 1867 139 54 7 chr17 67235505 67235800 -18202680 + AluSg SINE Alu 1 309 -1 26 0 0 27 chr17 67235800 67235817 -18202663 + AT_rich Low_complexity Low_complexity 20 36 0 293 191 0 90 chr17 67235821 67235910 -18202570 - MIR SINE MIR -70 138 58 2219 108 0 14 chr17 67237801 67238096 -18200384 + AluSg1 SINE Alu 1 291 -18 2246 198 21 3 chr17 67238098 67238382 -18200098 + L1M4 LINE L1 4850 5127 -1047 2157 108 4 0 chr17 67238382 67238659 -18199821 + AluSx SINE Alu 24 301 -11 2246 198 21 3 chr17 67238659 67238670 -18199810 + L1M4 LINE L1 5127 5136 -1038 2371 75 0 26 chr17 67238670 67238975 -18199505 - AluY SINE Alu -14 297 1 2246 198 21 3 chr17 67238975 67239480 -18199000 + L1M4 LINE L1 5136 5670 -504 2230 98 26 10 chr17 67239487 67239793 -18198687 + AluSx SINE Alu 1 311 -1 550 249 209 66 chr17 67240992 67241313 -18197167 + L1MC4a LINE L1 5442 5716 -2092 857 105 0 15 chr17 67241313 67241446 -18197034 + FLAM_C SINE Alu 1 131 -2 550 249 209 66 chr17 67241446 67241565 -18196915 + L1MC4a LINE L1 5716 5817 -1991 2476 78 0 0 chr17 67241565 67241860 -18196620 - AluY SINE Alu -16 295 1 550 249 209 66 chr17 67241860 67242008 -18196472 + L1MC4a LINE L1 5817 6115 -1693 2382 89 0 0 chr17 67242046 67242376 -18196104 - AluY SINE Alu 0 311 1 819 159 7 21 chr17 67242688 67242855 -18195625 - FLAM_C SINE Alu 0 143 1 185 220 198 55 chr17 67242855 67242946 -18195534 - MIR SINE MIR -157 105 2 236 318 0 0 chr17 67243049 67243115 -18195365 + GA-rich Low_complexity Low_complexity 1 66 0 1435 190 19 30 chr17 67243889 67244157 -18194323 + AluJb SINE Alu 1 265 -47 345 92 40 0 chr17 67244157 67244233 -18194247 + (TA)n Simple_repeat Simple_repeat 1 79 0 191 326 95 11 chr17 67244579 67244674 -18193806 - MER5A DNA MER1_type -21 168 66 185 143 167 0 chr17 67244872 67244914 -18193566 + L3 LINE CR1 1320 1368 -209 2254 113 3 0 chr17 67245237 67245530 -18192950 + AluSg SINE Alu 1 294 -16 475 215 0 21 chr17 67245596 67245689 -18192791 - MER58B DNA MER1_type -19 322 232 551 256 151 23 chr17 67296687 67296906 -18141574 + MIR SINE MIR 14 260 -2 2064 127 0 0 chr17 67297102 67297411 -18141069 - AluSq SINE Alu 0 309 1 2067 111 13 7 chr17 67297711 67298017 -18140463 + AluSc SINE Alu 1 308 -1 244 265 59 0 chr17 67299064 67299132 -18139348 + MIR SINE MIR 74 145 -63 229 209 30 45 chr17 67299237 67299304 -18139176 - L2 LINE L2 -193 3079 3014 405 262 9 9 chr17 67299513 67299620 -18138860 - AluSc SINE Alu -125 184 78 670 178 66 56 chr17 67299932 67300129 -18138351 - L1MC4a LINE L1 -1480 6328 6130 566 258 119 88 chr17 67300169 67300450 -18138030 + L1ME4a LINE L1 5535 5806 -315 2091 133 7 0 chr17 67300450 67300744 -18137736 + AluSx SINE Alu 1 296 -16 566 258 119 88 chr17 67300744 67300824 -18137656 + L1ME4a LINE L1 5806 5882 -239 1828 175 0 23 chr17 67300824 67301132 -18137348 - AluJb SINE Alu -11 301 1 566 258 119 88 chr17 67301132 67301172 -18137308 + L1ME4a LINE L1 5882 5919 -202 1774 127 0 4 chr17 67301172 67301424 -18137056 + AluSx SINE Alu 1 251 -61 566 258 119 88 chr17 67301424 67301585 -18136895 + L1ME4a LINE L1 5919 6116 -5 1772 148 3 87 chr17 67301853 67302185 -18136295 + AluSx SINE Alu 1 304 -8 3877 247 118 40 chr17 67302189 67303473 -18135007 - HAL1 LINE L1 -3 2504 1322 2232 114 0 29 chr17 67303473 67303789 -18134691 - AluSg1 SINE Alu 0 309 3 3877 247 118 40 chr17 67303789 67303896 -18134584 - HAL1 LINE L1 -1185 1322 1225 1944 196 22 3 chr17 67303896 67304254 -18134226 + MLT1A1 LTR MaLR 1 365 0 3877 247 118 40 chr17 67304254 67304470 -18134010 - HAL1 LINE L1 -1282 1225 770 288 111 0 0 chr17 67305640 67305685 -18132795 + (TG)n Simple_repeat Simple_repeat 2 46 0 195 100 0 0 chr17 67305698 67305728 -18132752 + (TC)n Simple_repeat Simple_repeat 2 31 0 786 170 0 22 chr17 67305919 67306054 -18132426 + FLAM_C SINE Alu 2 133 0 375 274 114 65 chr17 67307076 67307367 -18131113 + L1ME4a LINE L1 5677 5995 -126 2295 86 3 20 chr17 67307367 67307670 -18130810 + AluSx SINE Alu 1 298 -14 375 274 114 65 chr17 67307670 67307790 -18130690 + L1ME4a LINE L1 5995 6108 -13 2132 99 7 0 chr17 67308214 67308497 -18129983 - AluSx SINE Alu -27 285 1 1752 65 4 76 chr17 67308831 67309094 -18129386 - AluY SINE Alu 0 311 68 23 0 0 0 chr17 67309209 67309232 -18129248 + AT_rich Low_complexity Low_complexity 1 23 0 1699 157 52 7 chr17 67309236 67309522 -18128958 + AluJb SINE Alu 3 301 -11 1002 152 7 158 chr17 67309978 67310186 -18128294 - L1MC4 LINE L1 -2 8040 7891 2147 118 7 0 chr17 67310186 67310475 -18128005 + AluSx SINE Alu 1 291 -21 1002 152 7 158 chr17 67310475 67310569 -18127911 - L1MC4 LINE L1 -151 7891 7784 * 1583 203 61 50 chr17 67310568 67311027 -18127453 - L1MC4a LINE L1 -1215 6593 6130 343 270 18 23 chr17 67311058 67311275 -18127205 + L1ME LINE L1 5528 5779 -342 692 317 150 5 chr17 67311547 67311966 -18126514 + MLT1G1 LTR MaLR 109 588 -7 1827 114 0 0 chr17 67312214 67312460 -18126020 + AluSg SINE Alu 61 306 -4 702 183 8 23 chr17 67312469 67312600 -18125880 + FLAM_C SINE Alu 5 133 0 2520 140 38 69 chr17 67312606 67313127 -18125353 + L1MA4 LINE L1 5769 6273 -27 861 152 157 10 chr17 67313261 67313459 -18125021 + MER58B DNA MER1_type 105 331 -10 2085 174 51 122 chr17 67313467 67313691 -18124789 + L1ME1 LINE L1 5073 5311 -855 1746 159 7 48 chr17 67313691 67313999 -18124481 + AluJb SINE Alu 1 295 -17 2496 71 3 0 chr17 67313999 67314309 -18124171 + AluY SINE Alu 1 311 0 2085 174 51 122 chr17 67314000 67314370 -18124110 + L1ME1 LINE L1 5311 5706 -460 1769 167 3 33 chr17 67314370 67314675 -18123805 + AluJo SINE Alu 1 296 -16 2085 174 51 122 chr17 67314675 67314839 -18123641 + L1ME1 LINE L1 5706 5483 -683 2504 72 0 3 chr17 67314839 67315146 -18123334 + AluY SINE Alu 1 306 -5 2085 174 51 122 chr17 67315146 67315509 -18122971 + L1ME1 LINE L1 5482 5869 -297 2327 76 0 3 chr17 67315560 67315848 -18122632 + AluSq SINE Alu 1 287 -26 354 250 87 97 chr17 67315854 67316234 -18122246 + L1M4 LINE L1 3754 4129 -2017 22 0 0 0 chr17 67316461 67316483 -18121997 + AT_rich Low_complexity Low_complexity 1 22 0 1136 123 0 12 chr17 67316629 67316792 -18121688 + AluSq SINE Alu 2 162 -151 180 0 0 0 chr17 67317045 67317065 -18121415 + (CGG)n Simple_repeat Simple_repeat 2 21 0 653 232 226 11 chr17 67317927 67318117 -18120363 - MER21B LTR ERV1 -632 231 1 297 214 57 79 chr17 67318201 67318341 -18120139 - MER20B DNA MER1_type -646 137 1 213 222 0 19 chr17 67318502 67318556 -18119924 - L2 LINE L2 0 3313 3261 1974 143 3 3 chr17 67318810 67319103 -18119377 + AluSx SINE Alu 1 293 -19 389 150 0 0 chr17 67319131 67319191 -18119289 + AluSp SINE Alu 75 134 -169 1988 130 7 0 chr17 67319310 67319602 -18118878 - AluSx SINE Alu -18 294 1 1092 187 6 128 chr17 67319664 67320001 -18118479 - AluSp SINE Alu -8 305 10 2435 34 44 0 chr17 67321316 67321610 -18116870 + AluY SINE Alu 1 307 -4 2560 56 7 0 chr17 67322559 67322863 -18115617 - AluY SINE Alu -5 306 1 26 0 0 0 chr17 67322931 67322957 -18115523 + AT_rich Low_complexity Low_complexity 1 26 0 1533 95 69 39 chr17 67323071 67323302 -18115178 - THE1B LTR MaLR -126 238 1 1233 103 0 0 chr17 67323560 67323715 -18114765 + AluSx SINE Alu 1 155 -157 29 28 0 0 chr17 67324585 67324621 -18113859 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr17 67325202 67325234 -18113246 + AT_rich Low_complexity Low_complexity 1 32 0 1004 163 10 59 chr17 67325332 67325535 -18112945 + MLT1B LTR MaLR 3 195 -195 2178 126 0 0 chr17 67325951 67326260 -18112220 + AluSx SINE Alu 1 309 -3 273 250 28 0 chr17 67327331 67327403 -18111077 - MIR3 SINE MIR -12 196 123 1597 121 117 16 chr17 67327403 67327684 -18110796 + AluY SINE Alu 1 307 0 185 116 0 23 chr17 67329554 67329597 -18108883 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 2263 87 21 3 chr17 67330529 67330816 -18107664 - AluSq SINE Alu -21 292 1 1239 178 110 4 chr17 67331193 67331432 -18107048 - MER58B DNA MER1_type -2079 341 70 243 0 0 0 chr17 67331432 67331459 -18107021 + (CA)n Simple_repeat Simple_repeat 2 28 0 1239 178 110 4 chr17 67331459 67331483 -18106997 - MER58B DNA MER1_type -2350 70 50 2228 126 0 0 chr17 67331652 67331953 -18106527 - AluSx SINE Alu -10 302 2 740 96 0 0 chr17 67331981 67332085 -18106395 - AluSp/q SINE Alu -1 312 209 2462 65 3 0 chr17 67332233 67332525 -18105955 + AluSp SINE Alu 1 293 -20 2290 114 0 13 chr17 67332807 67333123 -18105357 + AluSx SINE Alu 1 312 0 1536 173 81 0 chr17 67333212 67333484 -18104996 + AluJb SINE Alu 1 294 -18 239 354 118 0 chr17 67334000 67334144 -18104336 + L2 LINE L2 2204 2364 -950 701 249 30 30 chr17 67334144 67334381 -18104099 + L2 LINE L2 2480 2716 -598 1993 95 0 11 chr17 67334465 67334729 -18103751 - AluY SINE Alu -12 299 39 2028 113 10 45 chr17 67334835 67335144 -18103336 - AluSq SINE Alu -15 298 1 537 288 190 12 chr17 67335181 67335367 -18103113 + L2 LINE L2 2925 3077 -236 1757 155 4 7 chr17 67335367 67335644 -18102836 + AluJb SINE Alu 35 310 -2 537 288 190 12 chr17 67335644 67335783 -18102697 + L2 LINE L2 3077 3308 -5 1782 159 0 20 chr17 67336218 67336519 -18101961 + AluJb SINE Alu 1 295 -17 200 321 165 9 chr17 67336748 67336857 -18101623 + MIR3 SINE MIR 43 168 -40 1507 171 62 7 chr17 67337190 67337495 -18100985 + MER33 DNA MER1_type 1 322 -2 2143 97 11 0 chr17 67341392 67341712 -18096768 + AluSx SINE Alu 1 323 0 23 54 0 0 chr17 67342121 67342158 -18096322 + AT_rich Low_complexity Low_complexity 1 37 0 1452 157 71 29 chr17 67342677 67342957 -18095523 + AluJo SINE Alu 1 292 -20 1364 136 0 55 chr17 67343800 67344020 -18094460 - AluJb SINE Alu -18 294 87 1278 147 216 0 chr17 67345546 67345791 -18092689 + AluJo SINE Alu 1 298 -4 1948 137 40 0 chr17 67345853 67346130 -18092350 + AluJb SINE Alu 1 288 -24 254 230 16 56 chr17 67347359 67347485 -18090995 + (CCGCG)n Simple_repeat Simple_repeat 2 122 0 2266 103 7 0 chr17 67348027 67348337 -18090143 - AluSx SINE Alu 0 312 1 282 240 73 80 chr17 67348783 67348892 -18089588 + MIR SINE MIR 46 155 -107 2348 94 0 0 chr17 67348892 67349191 -18089289 - AluSx SINE Alu -13 299 1 282 240 73 80 chr17 67349191 67349231 -18089249 + MIR SINE MIR 155 194 -68 2020 108 22 4 chr17 67349669 67349982 -18088498 - AluSx SINE Alu 0 318 1 684 75 0 21 chr17 67350517 67350611 -18087869 + AluS SINE Alu 2 93 -219 1829 110 4 0 chr17 67350616 67350862 -18087618 - AluSq SINE Alu -56 257 11 982 131 7 13 chr17 67350988 67351141 -18087339 - AluSx SINE Alu -159 153 2 197 263 0 35 chr17 67351237 67351294 -18087186 + MIR SINE MIR 96 150 -58 1016 217 33 0 chr17 67351733 67351945 -18086535 - MER20 DNA MER1_type 0 219 1 2124 97 4 0 chr17 67352550 67352856 -18085624 + AluY SINE Alu 1 307 0 547 242 23 0 chr17 67353231 67353359 -18085121 + MER5A DNA MER1_type 37 167 -22 190 270 102 66 chr17 67353723 67353860 -18084620 + L2 LINE L2 3172 3313 0 23 33 0 0 chr17 67354360 67354390 -18084090 + AT_rich Low_complexity Low_complexity 1 30 0 710 263 38 16 chr17 67354521 67354707 -18083773 - MER58C DNA MER1_type -11 204 15 249 263 0 50 chr17 67354889 67354969 -18083511 - MIR3 SINE MIR -3 205 130 678 168 17 0 chr17 67355576 67355695 -18082785 - FLAM_C SINE Alu -12 121 1 315 195 116 79 chr17 67355696 67355866 -18082614 - L1ME3A LINE L1 -49 6115 5931 1834 116 0 0 chr17 67355876 67356117 -18082363 + AluSq SINE Alu 1 241 -72 302 262 102 99 chr17 67356166 67356460 -18082020 + L1ME4a LINE L1 5677 5971 -150 1970 151 3 0 chr17 67356466 67356764 -18081716 + AluSx SINE Alu 1 299 -13 224 320 45 13 chr17 67357098 67357274 -18081206 + MIR SINE MIR 10 192 -70 1665 157 10 67 chr17 67357584 67357897 -18080583 - AluJo SINE Alu -17 295 1 1227 199 45 8 chr17 67357939 67358205 -18080275 - AluJo SINE Alu -3 309 34 699 206 8 0 chr17 67358223 67358354 -18080126 - FLAM_C SINE Alu -1 132 1 1056 169 6 0 chr17 67358515 67358681 -18079799 + AluJb SINE Alu 134 300 -12 2215 124 0 0 chr17 67358837 67359136 -18079344 - AluSq SINE Alu -14 299 1 726 266 20 15 chr17 67359226 67359425 -18079055 + MLT1A2 LTR MaLR 175 374 0 2009 137 27 3 chr17 67359513 67359806 -18078674 - AluSx SINE Alu -12 300 1 1751 155 4 0 chr17 67359859 67360117 -18078363 - AluJo SINE Alu -15 297 39 944 95 48 0 chr17 67360217 67360343 -18078137 - AluSq/x SINE Alu -179 133 2 952 324 99 12 chr17 67360495 67361093 -18077387 + L1MC4a LINE L1 5284 5933 -1875 1958 166 3 0 chr17 67361278 67361586 -18076894 + AluJb SINE Alu 1 309 -3 197 299 47 39 chr17 67362560 67362687 -18075793 + L2 LINE L2 2715 2842 -472 2566 59 0 10 chr17 67362953 67363256 -18075224 - AluY SINE Alu -11 300 1 792 228 66 0 chr17 67363407 67363618 -18074862 - MIR SINE MIR -25 237 13 225 94 0 0 chr17 67366794 67366826 -18071654 + (GGGTG)n Simple_repeat Simple_repeat 3 34 0 2124 113 7 0 chr17 67367511 67367815 -18070665 + AluSq SINE Alu 1 306 0 26 30 0 0 chr17 67367948 67367981 -18070499 + AT_rich Low_complexity Low_complexity 1 33 0 1426 172 55 34 chr17 67368167 67368441 -18070039 - Tigger3(Golem) DNA MER2_type 0 3029 2762 2364 116 0 3 chr17 67368441 67368752 -18069728 + AluSx SINE Alu 1 310 -2 1426 172 55 34 chr17 67368752 67368852 -18069628 - Tigger3(Golem) DNA MER2_type -267 2762 1 1318 141 0 0 chr17 67369327 67369519 -18068961 - AluSg/x SINE Alu -2 310 119 2230 120 0 0 chr17 67369731 67370030 -18068450 - AluSx SINE Alu -13 299 1 1753 94 144 0 chr17 67370032 67370288 -18068192 - AluSp SINE Alu -10 293 1 1593 186 45 0 chr17 67370564 67370855 -18067625 - AluJo SINE Alu -8 304 1 249 299 70 13 chr17 67371784 67371941 -18066539 - MIR SINE MIR 0 262 97 1894 130 36 0 chr17 67372775 67373052 -18065428 + AluSx SINE Alu 1 287 -25 1620 135 92 39 chr17 67373054 67373335 -18065145 + AluSx SINE Alu 1 296 -16 2161 129 0 0 chr17 67373558 67373852 -18064628 + AluSg SINE Alu 1 294 -16 1706 182 17 0 chr17 67373907 67374203 -18064277 + AluJo SINE Alu 11 311 -1 329 71 0 0 chr17 67374265 67374307 -18064173 - 5S rRNA rRNA -79 42 1 2339 78 0 0 chr17 67374428 67374711 -18063769 + AluSc SINE Alu 1 283 -26 282 168 0 28 chr17 67374711 67374818 -18063662 + (TTAA)n Simple_repeat Simple_repeat 1 104 0 256 290 52 58 chr17 67376188 67376343 -18062137 + L2 LINE L2 3160 3313 0 2471 57 0 3 chr17 67376433 67376730 -18061750 - AluY SINE Alu -14 297 2 189 0 0 0 chr17 67376919 67376940 -18061540 + (CAAAAA)n Simple_repeat Simple_repeat 4 24 0 2053 120 34 0 chr17 67377060 67377352 -18061128 + AluSq SINE Alu 1 302 -11 287 216 160 4 chr17 67378199 67378320 -18060160 + MLT1F LTR MaLR 20 197 -352 1858 101 75 0 chr17 67378372 67378640 -18059840 + AluSq SINE Alu 1 288 -25 566 164 69 26 chr17 67378652 67378768 -18059712 + FLAM_A SINE Alu 1 121 -12 1089 116 7 19 chr17 67378782 67378937 -18059543 - AluSq SINE Alu -160 153 1 303 125 156 0 chr17 67378938 67379002 -18059478 - MER5A DNA MER1_type -114 75 2 272 240 230 0 chr17 67379193 67379293 -18059187 + MER5A DNA MER1_type 61 183 -6 325 227 142 35 chr17 67379335 67379476 -18059004 + MER5B DNA MER1_type 23 178 0 2280 102 10 0 chr17 67380500 67380804 -18057676 - AluSx SINE Alu -5 307 1 328 226 0 12 chr17 67380804 67380888 -18057592 - MIR SINE MIR -16 246 164 835 218 62 67 chr17 67380889 67381292 -18057188 - L1MDa LINE L1 -4341 2085 1705 268 293 13 0 chr17 67381520 67381595 -18056885 - L2 LINE L2 -1018 2296 2221 2309 95 0 0 chr17 67381598 67381883 -18056597 + AluSc SINE Alu 1 285 -24 188 199 39 45 chr17 67382109 67382265 -18056215 + (CATATA)n Simple_repeat Simple_repeat 2 156 0 * 198 167 0 0 chr17 67382233 67382269 -18056211 + (CATA)n Simple_repeat Simple_repeat 3 38 0 592 219 111 39 chr17 67382269 67382664 -18055816 + L1MDa LINE L1 2223 2694 -3964 757 179 0 0 chr17 67382666 67382783 -18055697 + FLAM_C SINE Alu 2 118 -25 1267 255 25 69 chr17 67382821 67382927 -18055553 + L1MDa LINE L1 2659 2768 -3772 2130 139 0 0 chr17 67382927 67383228 -18055252 - AluSx SINE Alu -11 301 1 2103 136 3 0 chr17 67383237 67383539 -18054941 - AluSx SINE Alu -9 303 1 1267 255 25 69 chr17 67383539 67383931 -18054549 + L1MDa LINE L1 2776 3145 -3395 41 21 0 0 chr17 67384384 67384432 -18054048 + AT_rich Low_complexity Low_complexity 1 48 0 411 73 0 0 chr17 67384484 67384539 -18053941 + (A)n Simple_repeat Simple_repeat 1 55 0 4461 111 10 13 chr17 67385672 67386366 -18052114 + L1MA2 LINE L1 5613 6304 0 2281 105 0 0 chr17 67387043 67387339 -18051141 - AluSx SINE Alu -16 296 1 238 191 0 0 chr17 67388250 67388292 -18050188 + L1ME LINE L1 5563 5604 -517 9837 193 85 23 chr17 67388422 67390363 -18048117 + Cheshire DNA MER1_type 1 2103 -317 1786 145 14 10 chr17 67390363 67390652 -18047828 + AluJo SINE Alu 6 295 -17 9837 193 85 23 chr17 67390652 67390969 -18047511 + Cheshire DNA MER1_type 2103 2399 -21 196 343 0 14 chr17 67390980 67391053 -18047427 - MER5A DNA MER1_type 0 189 118 181 324 0 14 chr17 67391005 67391079 -18047401 + MER5A DNA MER1_type 37 109 -80 * 1729 158 0 45 chr17 67391276 67391586 -18046894 - AluJb SINE Alu -16 296 1 1490 163 0 27 chr17 67392085 67392343 -18046137 + AluJo SINE Alu 1 251 -61 241 154 19 19 chr17 67393068 67393120 -18045360 + L1ME4a LINE L1 5959 6010 -111 2281 88 3 0 chr17 67393160 67393466 -18045014 - AluSp SINE Alu 0 307 1 769 146 16 16 chr17 67393703 67393826 -18044654 - FLAM_A SINE Alu -12 130 8 1942 130 13 54 chr17 67394211 67394345 -18044135 + AluSx SINE Alu 1 139 -173 2381 52 41 0 chr17 67394345 67394635 -18043845 + AluY SINE Alu 1 302 -9 1942 130 13 54 chr17 67394635 67394816 -18043664 + AluSx SINE Alu 139 303 -9 183 129 0 0 chr17 67395339 67395370 -18043110 + (A)n Simple_repeat Simple_repeat 1 31 0 336 305 78 14 chr17 67395795 67395936 -18042544 - MIR3 SINE MIR -25 183 34 739 170 0 0 chr17 67397123 67397235 -18041245 + FLAM_C SINE Alu 5 116 -27 1263 127 68 49 chr17 67397513 67397784 -18040696 - Tigger3(Golem) DNA MER2_type -107 2922 1 463 198 0 50 chr17 67398154 67398255 -18040225 + FLAM_A SINE Alu 4 99 -43 483 18 0 0 chr17 67398255 67398311 -18040169 + (GA)n Simple_repeat Simple_repeat 2 57 0 324 0 0 0 chr17 67398310 67398346 -18040134 + (TG)n Simple_repeat Simple_repeat 2 37 0 * 2283 108 0 0 chr17 67399217 67399513 -18038967 + AluSx SINE Alu 1 296 -16 1790 148 13 31 chr17 67399591 67399909 -18038571 + AluJo SINE Alu 1 312 0 2445 98 0 0 chr17 67400121 67400427 -18038053 + AluSg SINE Alu 1 306 -4 21 0 0 0 chr17 67400760 67400781 -18037699 + AT_rich Low_complexity Low_complexity 1 21 0 1677 62 0 0 chr17 67400792 67400986 -18037494 - AluY SINE Alu -117 194 1 2261 96 3 0 chr17 67401170 67401462 -18037018 - AluSp SINE Alu -9 304 12 372 242 189 7 chr17 67401734 67401887 -18036593 + L1ME4a LINE L1 5851 6031 -90 261 248 21 111 chr17 67402752 67402812 -18035668 + MIR3 SINE MIR 27 91 -117 1886 163 0 0 chr17 67402812 67403121 -18035359 + AluSx SINE Alu 1 309 0 261 248 21 111 chr17 67403121 67403226 -18035254 + MIR3 SINE MIR 91 181 -27 235 238 87 71 chr17 67403307 67403433 -18035047 + L2 LINE L2 3145 3272 0 284 306 102 16 chr17 67403731 67403976 -18034504 + L2 LINE L2 1805 2070 -1244 787 144 0 34 chr17 67404041 67404187 -18034293 + FLAM_C SINE Alu 3 143 0 305 307 18 93 chr17 67404196 67404421 -18034059 + L2 LINE L2 2131 2338 -976 1995 163 0 65 chr17 67404430 67404512 -18033968 - MER47A DNA MER2_type -1962 361 275 2339 102 0 0 chr17 67404512 67404807 -18033673 + AluSg SINE Alu 1 295 -15 1724 154 7 52 chr17 67404810 67405116 -18033364 - AluJb SINE Alu -20 292 1 1995 163 0 65 chr17 67405116 67405415 -18033065 - MER47A DNA MER2_type -2050 273 1 918 297 172 38 chr17 67405416 67406244 -18032236 + L2 LINE L2 2343 3292 -21 1813 118 43 0 chr17 67406898 67407178 -18031302 - AluSc SINE Alu -17 292 1 2122 109 7 0 chr17 67408464 67408768 -18029712 + AluSp SINE Alu 1 306 -7 2061 116 0 0 chr17 67408842 67409136 -18029344 + AluSx SINE Alu 1 294 -18 514 307 58 10 chr17 67409345 67409550 -18028930 - MIR SINE MIR -2 260 46 1716 178 3 0 chr17 67409679 67409972 -18028508 - AluJb SINE Alu -16 296 3 1436 215 3 13 chr17 67410228 67410535 -18027945 + AluJb SINE Alu 1 304 -8 784 154 0 29 chr17 67410904 67411040 -18027440 + FLAM_C SINE Alu 2 133 0 2057 127 0 0 chr17 67411161 67411460 -18027020 + AluSx SINE Alu 14 312 0 1813 144 41 0 chr17 67411625 67411916 -18026564 + AluSx SINE Alu 1 303 -9 352 353 6 12 chr17 67412326 67412490 -18025990 + MIR3 SINE MIR 1 160 -62 32 43 0 0 chr17 67412614 67412660 -18025820 + AT_rich Low_complexity Low_complexity 1 46 0 1423 169 0 4 chr17 67412676 67412924 -18025556 - AluJo SINE Alu -10 302 56 22 56 0 0 chr17 67413463 67413499 -18024981 + AT_rich Low_complexity Low_complexity 1 36 0 861 182 0 7 chr17 67413629 67413783 -18024697 + FRAM SINE Alu 1 153 -23 513 157 52 52 chr17 67414046 67414161 -18024319 - FLAM_A SINE Alu -10 132 18 23 0 0 0 chr17 67414209 67414232 -18024248 + AT_rich Low_complexity Low_complexity 1 23 0 1726 147 0 38 chr17 67415495 67415788 -18022692 - AluSx SINE Alu -9 303 22 302 255 94 67 chr17 67416111 67416260 -18022220 - MER5A DNA MER1_type -24 165 13 199 318 55 27 chr17 67416775 67416835 -18021645 - L2 LINE L2 -2 3311 3245 1579 189 10 10 chr17 67416835 67417147 -18021333 + AluJo SINE Alu 1 312 0 199 318 55 27 chr17 67417147 67417196 -18021284 - L2 LINE L2 -68 3245 3199 2037 88 37 10 chr17 67417722 67418018 -18020462 + AluSp SINE Alu 1 304 -9 2054 121 0 0 chr17 67418544 67418842 -18019638 - AluSq SINE Alu -15 298 1 21 57 0 0 chr17 67419149 67419184 -18019296 + AT_rich Low_complexity Low_complexity 1 35 0 809 187 28 6 chr17 67419319 67419501 -18018979 - MER53 DNA DNA -3 186 1 1523 135 35 48 chr17 67419718 67420030 -18018450 + AluJb SINE Alu 4 311 -1 290 216 160 4 chr17 67420520 67420641 -18017839 + MLT1F LTR MaLR 20 197 -352 1914 103 48 0 chr17 67420693 67420989 -18017491 + AluSq SINE Alu 1 309 0 320 229 220 9 chr17 67421033 67421142 -18017338 + MLT1G LTR MaLR 143 274 -281 402 202 132 23 chr17 67421397 67421526 -18016954 + MLT1G LTR MaLR 440 582 -8 251 256 167 0 chr17 67422342 67422420 -18016060 + L2 LINE L2 3168 3258 -14 310 349 38 0 chr17 67422652 67422784 -18015696 + MIR3 SINE MIR 23 159 -49 1478 180 117 61 chr17 67423086 67423241 -18015239 + MLT1D LTR MaLR 1 146 -359 680 220 8 0 chr17 67423241 67423373 -18015107 - FLAM_A SINE Alu 0 133 1 1478 180 117 61 chr17 67423373 67423695 -18014785 + MLT1D LTR MaLR 146 505 0 508 319 34 5 chr17 67423757 67423964 -18014516 - MIR SINE MIR -49 213 1 220 364 18 36 chr17 67424149 67424259 -18014221 - MIR SINE MIR -55 153 46 1776 123 40 33 chr17 67425174 67425476 -18013004 + AluSx SINE Alu 1 304 -8 1814 126 29 32 chr17 67425885 67426194 -18012286 - AluSx SINE Alu -4 308 1 1010 183 34 10 chr17 67426330 67426538 -18011942 + AluJo SINE Alu 86 298 -14 373 318 24 24 chr17 67426620 67426746 -18011734 - MIR SINE MIR -124 138 13 801 161 0 0 chr17 67426836 67426966 -18011514 + AluJo/FLAM SINE Alu 4 133 -169 1437 100 0 96 chr17 67426968 67427040 -18011440 + AluSq SINE Alu 84 161 -152 1594 99 0 0 chr17 67427040 67427252 -18011228 + AluSg/x SINE Alu 83 294 -16 1437 100 0 96 chr17 67427252 67427429 -18011051 + AluSq SINE Alu 161 309 -4 210 305 172 48 chr17 67427881 67428048 -18010432 + L2 LINE L2 1982 2127 -1187 3788 120 4 2 chr17 67428048 67428574 -18009906 + MER1A DNA MER1_type 1 527 0 210 305 172 48 chr17 67428574 67429012 -18009468 + L2 LINE L2 2127 2662 -652 1033 139 35 0 chr17 67429060 67429232 -18009248 - AluSg/x SINE Alu -1 309 132 2160 111 7 0 chr17 67429232 67429529 -18008951 - AluSx SINE Alu -13 299 1 343 348 51 30 chr17 67429530 67429825 -18008655 + L2 LINE L2 2723 3022 -291 1166 180 0 18 chr17 67430079 67430307 -18008173 + AluJo SINE Alu 85 308 -4 2301 102 0 3 chr17 67430307 67430620 -18007860 + AluSx SINE Alu 1 312 0 448 316 19 32 chr17 67430841 67430999 -18007481 - L2 LINE L2 0 3272 3117 318 268 113 7 chr17 67431114 67431256 -18007224 - L1ME4a LINE L1 -2 6119 5963 253 138 0 0 chr17 67431284 67431329 -18007151 - L1MB7 LINE L1 0 6178 6134 1589 176 0 37 chr17 67431545 67431872 -18006608 + AluJo SINE Alu 1 316 0 2107 102 3 0 chr17 67432116 67432411 -18006069 + AluSg SINE Alu 1 296 -14 1264 164 154 19 chr17 67432704 67433022 -18005458 - MER46B DNA MER2_type 0 236 1 894 115 7 0 chr17 67434048 67434187 -18004293 - FLAM_C SINE Alu -3 140 1 22 70 0 0 chr17 67435739 67435782 -18002698 + GC_rich Low_complexity Low_complexity 1 43 0 228 167 14 56 chr17 67435817 67435889 -18002591 + C-rich Low_complexity Low_complexity 3 71 0 23 33 0 0 chr17 67436174 67436204 -18002276 + GC_rich Low_complexity Low_complexity 1 30 0 189 74 0 0 chr17 67436359 67436386 -18002094 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 27 29 0 0 chr17 67436520 67436554 -18001926 + GC_rich Low_complexity Low_complexity 1 34 0 1712 131 3 28 chr17 67436839 67437159 -18001321 - AluSx SINE Alu 0 312 1 201 185 25 37 chr17 67438525 67438578 -17999902 + GA-rich Low_complexity Low_complexity 3 56 -26 2128 110 0 7 chr17 67438578 67438886 -17999594 + AluSx SINE Alu 1 306 -6 201 185 25 37 chr17 67438886 67438913 -17999567 + GA-rich Low_complexity Low_complexity 56 82 0 787 169 12 62 chr17 67439016 67439176 -17999304 + L1MB5 LINE L1 5580 5731 -443 1334 159 122 11 chr17 67439177 67439448 -17999032 + AluJb SINE Alu 1 301 -11 881 195 0 6 chr17 67439448 67439607 -17998873 + AluJo/FRAM SINE Alu 135 292 -20 1263 117 9 47 chr17 67439607 67439691 -17998789 + L1PA15 LINE L1 5954 6040 -125 2156 84 0 7 chr17 67439691 67440007 -17998473 + AluSq SINE Alu 1 314 0 1263 117 9 47 chr17 67440007 67440135 -17998345 + L1PA15 LINE L1 6040 6159 -6 2132 143 99 23 chr17 67440137 67440577 -17997903 + L1MB5 LINE L1 5715 6174 0 46 33 0 0 chr17 67440588 67440648 -17997832 + AT_rich Low_complexity Low_complexity 1 60 0 1073 144 5 20 chr17 67440648 67440843 -17997637 - AluSg/x SINE Alu -2 308 117 1542 76 24 0 chr17 67440843 67441053 -17997427 - AluSg SINE Alu -95 215 1 954 251 97 36 chr17 67441659 67441989 -17996491 + MARNA DNA Mariner 228 577 -9 1332 152 130 19 chr17 67442334 67442604 -17995876 - AluJo SINE Alu -12 300 1 809 173 0 0 chr17 67442626 67442759 -17995721 - FLAM_C SINE Alu 0 133 1 351 0 0 0 chr17 67443117 67443156 -17995324 + (TG)n Simple_repeat Simple_repeat 2 40 0 1463 170 62 0 chr17 67443651 67443927 -17994553 - AluJo SINE Alu -19 293 1 1719 152 7 17 chr17 67444449 67444746 -17993734 - AluJo SINE Alu -18 294 1 825 144 0 0 chr17 67444941 67445059 -17993421 + FLAM_C SINE Alu 3 120 -23 213 175 0 0 chr17 67445063 67445103 -17993377 + (TA)n Simple_repeat Simple_repeat 2 41 0 2114 98 38 0 chr17 67445161 67445448 -17993032 - AluSg SINE Alu -12 298 1 184 246 197 0 chr17 67445540 67445601 -17992879 + MIR SINE MIR 117 189 -73 227 353 58 32 chr17 67445642 67445798 -17992682 - L3b LINE CR1 -115 1468 1309 1964 140 0 7 chr17 67446079 67446386 -17992094 - AluSx SINE Alu -7 305 1 410 286 14 14 chr17 67446544 67446684 -17991796 - MER115 DNA AcHobo -290 403 264 436 265 39 0 chr17 67446795 67446897 -17991583 - MER115 DNA AcHobo -587 106 1 1925 88 84 0 chr17 67447411 67447695 -17990785 + AluSx SINE Alu 5 312 0 497 29 0 29 chr17 67448096 67448164 -17990316 + (TTTCC)n Simple_repeat Simple_repeat 5 70 0 215 167 0 21 chr17 67448154 67448202 -17990278 + CT-rich Low_complexity Low_complexity 1 47 0 * 285 29 0 0 chr17 67448202 67448236 -17990244 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 1770 71 38 8 chr17 67448236 67448475 -17990005 - AluSq SINE Alu -65 248 3 2005 110 0 0 chr17 67449072 67449378 -17989102 - AluSx SINE Alu 0 306 1 1722 111 100 11 chr17 67449378 67449657 -17988823 - AluSq SINE Alu -9 304 1 1387 122 154 8 chr17 67450380 67450626 -17987854 - AluJb SINE Alu -30 282 1 1998 134 72 72 chr17 67450743 67450884 -17987596 + L1MC3 LINE L1 7300 7440 -345 1934 123 0 10 chr17 67450884 67451177 -17987303 + AluSx SINE Alu 16 305 -7 1998 134 72 72 chr17 67451177 67451521 -17986959 + L1MC3 LINE L1 7439 7785 0 234 0 0 0 chr17 67453120 67453146 -17985334 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 684 162 0 18 chr17 67457606 67457717 -17980763 + FLAM_C SINE Alu 2 110 -33 2412 78 0 3 chr17 67458001 67458307 -17980173 + AluY SINE Alu 1 305 -6 256 281 35 88 chr17 67458512 67458626 -17979854 + MIR SINE MIR 87 194 -68 2067 93 3 3 chr17 67458993 67459282 -17979198 - AluSx SINE Alu -23 289 1 479 311 51 21 chr17 67459456 67459790 -17978690 - L1ME4a LINE L1 -233 5888 5545 396 0 0 0 chr17 67460713 67460757 -17977723 + (A)n Simple_repeat Simple_repeat 1 44 0 369 291 58 0 chr17 67461582 67461685 -17976795 + L2 LINE L2 3197 3305 -8 314 100 100 0 chr17 67462900 67462960 -17975520 - MADE1 DNA Mariner -14 66 1 533 255 35 112 chr17 67463090 67463349 -17975131 + MIR SINE MIR 9 247 -15 234 138 0 52 chr17 67463440 67463498 -17974982 + LTR66 LTR ERVL 385 439 -171 615 226 52 0 chr17 67463574 67463689 -17974791 + MIR SINE MIR 31 151 -111 2334 90 0 0 chr17 67464226 67464537 -17973943 - AluY SINE Alu 0 311 1 25 0 0 0 chr17 67464556 67464581 -17973899 + AT_rich Low_complexity Low_complexity 1 25 0 1827 180 0 3 chr17 67464639 67464950 -17973530 + AluSx SINE Alu 1 310 -2 773 181 8 0 chr17 67465131 67465258 -17973222 + FLAM_C SINE Alu 1 128 -5 204 40 0 0 chr17 67465270 67465295 -17973185 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 376 304 20 0 chr17 67465430 67465532 -17972948 + MIR SINE MIR 31 134 -74 184 355 0 0 chr17 67465568 67465630 -17972850 - MER5A DNA MER1_type 0 189 128 1554 198 0 10 chr17 67465632 67465930 -17972550 + AluJo SINE Alu 1 295 -17 1539 195 0 3 chr17 67465932 67466224 -17972256 + AluJo SINE Alu 1 291 -21 715 137 0 0 chr17 67466227 67466329 -17972151 + AluJ SINE Alu 2 103 -209 6605 74 16 0 chr17 67466361 67467526 -17970954 - L1PA8A LINE L1 -1 6130 4967 62 63 0 0 chr17 67467531 67467642 -17970838 + AT_rich Low_complexity Low_complexity 1 111 0 395 147 15 0 chr17 67467646 67467714 -17970766 - MER5A DNA MER1_type -80 109 41 1993 107 36 0 chr17 67467877 67468158 -17970322 + AluSq SINE Alu 2 292 -21 1166 186 14 18 chr17 67468499 67468719 -17969761 + AluJb SINE Alu 87 305 -7 2232 174 13 3 chr17 67468980 67469354 -17969126 + MSTB LTR MaLR 1 378 -48 2214 62 0 3 chr17 67469365 67469657 -17968823 + AluY SINE Alu 1 291 -20 426 345 49 21 chr17 67469670 67469954 -17968526 + L3 LINE CR1 481 772 -805 1530 132 0 28 chr17 67470064 67470314 -17968166 - AluJb SINE Alu -65 247 5 339 129 97 0 chr17 67470361 67470423 -17968057 + FLAM_A SINE Alu 66 133 0 1994 126 0 0 chr17 67471132 67471465 -17967015 - AluSq SINE Alu 0 333 1 1053 163 0 0 chr17 67471484 67471650 -17966830 - 7SLRNA srpRNA srpRNA -145 175 10 1900 123 0 55 chr17 67472059 67472178 -17966302 + AluSx SINE Alu 1 125 -187 428 0 0 19 chr17 67472178 67472231 -17966249 + (TAAAA)n Simple_repeat Simple_repeat 1 52 0 1900 123 0 55 chr17 67472231 67472436 -17966044 + AluSx SINE Alu 125 307 -5 2474 62 0 0 chr17 67473310 67473615 -17964865 + AluY SINE Alu 1 305 -6 333 279 38 14 chr17 67473623 67473742 -17964738 + MIR3 SINE MIR 36 162 -46 1525 107 83 24 chr17 67473883 67474136 -17964344 - AluSx SINE Alu -44 268 1 2133 109 20 0 chr17 67475283 67475587 -17962893 + AluSx SINE Alu 1 310 -2 394 182 102 0 chr17 67475844 67475932 -17962548 + MER3 DNA MER1_type 66 162 -47 805 202 17 12 chr17 67475935 67476108 -17962372 + MER3 DNA MER1_type 2234 2407 0 260 51 0 26 chr17 67476108 67476147 -17962333 + (TTTC)n Simple_repeat Simple_repeat 4 41 0 1891 159 0 6 chr17 67476192 67476506 -17961974 - AluSx SINE Alu 0 312 1 580 138 87 189 chr17 67476509 67476763 -17961717 + MER3 DNA MER1_type 2357 2584 0 506 294 46 20 chr17 67476908 67477105 -17961375 - MIR SINE MIR -8 254 53 1741 77 0 0 chr17 67477368 67477590 -17960890 - AluSc SINE Alu -87 222 1 778 180 0 0 chr17 67477810 67477932 -17960548 + FLAM_C SINE Alu 3 124 -9 2157 84 30 7 chr17 67477940 67478238 -17960242 + AluY SINE Alu 1 305 -6 1012 133 0 7 chr17 67478274 67478425 -17960055 + AluJo SINE Alu 87 236 -76 799 131 0 31 chr17 67478425 67478555 -17959925 + AluJo/FRAM SINE Alu 178 303 -9 334 297 194 0 chr17 67478558 67478713 -17959767 - L2 LINE L2 -22 3291 3107 2179 78 0 17 chr17 67479261 67479557 -17958923 + AluY SINE Alu 1 291 -20 406 349 49 21 chr17 67479570 67479854 -17958626 + L3 LINE CR1 481 772 -805 2031 96 23 17 chr17 67479976 67480277 -17958203 + AluSq SINE Alu 2 304 -9 824 208 13 0 chr17 67481483 67481632 -17956848 + FRAM SINE Alu 5 155 -21 421 280 42 49 chr17 67481677 67481820 -17956660 + MIR3 SINE MIR 17 158 -50 505 305 30 12 chr17 67481843 67482007 -17956473 + MIR SINE MIR 2 168 -94 1702 160 7 3 chr17 67482040 67482327 -17956153 - AluJb SINE Alu -7 305 18 803 337 56 49 chr17 67482385 67483209 -17955271 + L2 LINE L2 2255 3090 -182 1029 150 12 0 chr17 67483270 67483437 -17955043 + L1MB3 LINE L1 5686 5854 -329 298 345 62 0 chr17 67483459 67483572 -17954908 + L2 LINE L2 3136 3255 -17 1748 153 0 27 chr17 67483816 67484111 -17954369 + AluJb SINE Alu 1 287 -25 423 312 158 23 chr17 67484169 67484390 -17954090 - MIR SINE MIR -4 258 8 240 176 67 36 chr17 67484620 67484740 -17953740 + (TA)n Simple_repeat Simple_repeat 2 131 -40 2156 86 0 0 chr17 67484740 67485050 -17953430 - AluSc SINE Alu 0 310 1 240 176 67 36 chr17 67485050 67485093 -17953387 + (TA)n Simple_repeat Simple_repeat 131 171 0 783 194 0 7 chr17 67485297 67485436 -17953044 + FLAM_C SINE Alu 4 141 -2 591 151 38 19 chr17 67485436 67485595 -17952885 + GA-rich Low_complexity Low_complexity 1 162 0 557 179 0 188 chr17 67485777 67486000 -17952480 - MIR SINE MIR -66 196 16 359 292 160 60 chr17 67486618 67486903 -17951577 + L2 LINE L2 1317 1572 -1742 2125 99 0 0 chr17 67486903 67487222 -17951258 - AluSx SINE Alu 0 319 1 359 292 160 60 chr17 67487222 67487473 -17951007 + L2 LINE L2 1572 1797 -1517 1519 168 37 34 chr17 67487473 67487635 -17950845 - AluJb SINE Alu -1 301 136 207 0 0 0 chr17 67487635 67487658 -17950822 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1519 168 37 34 chr17 67487658 67487792 -17950688 - AluJb SINE Alu -166 136 4 359 292 160 60 chr17 67487792 67487982 -17950498 + L2 LINE L2 1797 1967 -1347 2697 49 6 0 chr17 67487982 67488308 -17950172 - L1PA6 LINE L1 0 6154 5827 359 292 160 60 chr17 67488308 67488442 -17950038 + L2 LINE L2 1967 2266 -1048 1021 126 13 142 chr17 67488455 67488567 -17949913 + MER3 DNA MER1_type 2 127 -82 657 150 94 47 chr17 67488567 67488694 -17949786 + FLAM_C SINE Alu 1 133 0 1021 126 13 142 chr17 67488694 67488774 -17949706 + MER3 DNA MER1_type 127 160 -49 2020 120 0 7 chr17 67488774 67489073 -17949407 + AluSg SINE Alu 14 310 0 1021 126 13 142 chr17 67489073 67489118 -17949362 + MER3 DNA MER1_type 160 209 0 211 269 90 0 chr17 67489122 67489200 -17949280 + L2 LINE L2 2275 2359 -955 658 264 145 84 chr17 67489522 67489917 -17948563 + LTR33 LTR ERVL 1 433 -88 1499 149 16 71 chr17 67489917 67490226 -17948254 - AluJo SINE Alu -20 292 1 658 264 145 84 chr17 67490226 67490319 -17948161 + LTR33 LTR ERVL 433 519 -2 1534 203 0 29 chr17 67490732 67491038 -17947442 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr17 67491044 67491065 -17947415 + AT_rich Low_complexity Low_complexity 1 21 0 349 279 137 44 chr17 67491065 67491291 -17947189 - MIR SINE MIR -2 260 14 2119 56 56 3 chr17 67491332 67491617 -17946863 + AluY SINE Alu 1 300 -11 577 168 8 76 chr17 67491633 67491764 -17946716 + MLT1C LTR MaLR 1 122 -268 694 174 0 0 chr17 67491769 67491884 -17946596 + AluJb SINE Alu 2 116 -196 199 187 33 20 chr17 67491887 67492037 -17946443 + (TA)n Simple_repeat Simple_repeat 1 152 0 295 201 52 23 chr17 67492061 67492235 -17946245 + (TA)n Simple_repeat Simple_repeat 2 180 0 891 227 31 74 chr17 67492241 67492617 -17945863 + MLT1C LTR MaLR 113 467 0 463 137 0 0 chr17 67492789 67492862 -17945618 - FLAM_C SINE Alu -4 139 67 2154 115 0 0 chr17 67492934 67493246 -17945234 - AluSx SINE Alu 0 312 1 1532 75 10 0 chr17 67494059 67494260 -17944220 + AluSq SINE Alu 1 203 -110 265 238 16 0 chr17 67494375 67494438 -17944042 + C-rich Low_complexity Low_complexity 3 66 0 290 350 0 0 chr17 67495326 67495429 -17943051 - L2 LINE L2 -2 3270 3168 2261 87 7 0 chr17 67495558 67495856 -17942624 - AluSx SINE Alu -12 300 1 753 289 58 29 chr17 67495956 67496302 -17942178 + LTR16C LTR ERVL 71 426 -65 284 155 0 69 chr17 67496302 67496360 -17942120 - MIR SINE MIR -92 170 117 1640 149 0 87 chr17 67496438 67496773 -17941707 - AluJb SINE Alu -6 306 1 1638 168 0 17 chr17 67497445 67497737 -17940743 + AluJo SINE Alu 1 287 -25 461 281 55 98 chr17 67498139 67498395 -17940085 - L2 LINE L2 0 3272 3028 1779 119 4 0 chr17 67499068 67499320 -17939160 - AluSq SINE Alu -60 253 1 423 0 0 0 chr17 67500182 67500229 -17938251 + (TG)n Simple_repeat Simple_repeat 1 47 0 1372 206 64 49 chr17 67500956 67501089 -17937391 - MSTD LTR MaLR 0 396 267 2392 73 0 0 chr17 67501089 67501389 -17937091 - AluY SINE Alu -11 300 1 1372 206 64 49 chr17 67501389 67501643 -17936837 - MSTD LTR MaLR -129 267 3 332 251 48 102 chr17 67501968 67502135 -17936345 - MIR SINE MIR -26 236 79 2229 70 3 20 chr17 67502273 67502573 -17935907 + AluY SINE Alu 1 295 -16 244 206 15 29 chr17 67503070 67503138 -17935342 - MSTD LTR MaLR -327 69 3 799 123 0 0 chr17 67503395 67503509 -17934971 - MSTB2 LTR MaLR 0 457 344 294 257 110 81 chr17 67503809 67504081 -17934399 + MLT1I LTR MaLR 130 409 0 383 284 10 10 chr17 67504268 67504370 -17934110 + MIR SINE MIR 10 111 -151 442 247 89 21 chr17 67504767 67504957 -17933523 - L1MEc LINE L1 -2228 3987 3785 2270 246 42 45 chr17 67504960 67505449 -17933031 - MER21B LTR ERV1 -78 785 297 2354 97 0 0 chr17 67505449 67505747 -17932733 - AluSx SINE Alu -1 311 14 2270 246 42 45 chr17 67505747 67505879 -17932601 - MER21B LTR ERV1 -566 297 166 880 216 19 6 chr17 67505933 67506095 -17932385 - MER21B LTR ERV1 -687 176 13 2506 225 56 48 chr17 67506116 67506261 -17932219 - L1MEc LINE L1 -2437 3778 3636 1775 179 0 17 chr17 67506261 67506562 -17931918 - AluJo SINE Alu -16 296 1 2506 225 56 48 chr17 67506562 67506963 -17931517 - L1MEc LINE L1 -2579 3636 3240 2471 78 0 3 chr17 67506963 67507272 -17931208 - AluY SINE Alu -2 309 2 2506 225 56 48 chr17 67507272 67507738 -17930742 - L1MEc LINE L1 -2975 3240 2757 1192 107 0 0 chr17 67507747 67507906 -17930574 + AluSp SINE Alu 152 310 -3 968 250 65 65 chr17 67507906 67508380 -17930100 - L1MEc LINE L1 -3467 2748 2299 2229 110 7 7 chr17 67508380 67508681 -17929799 - AluSc SINE Alu -8 301 1 968 250 65 65 chr17 67508681 67509098 -17929382 - L1MEc LINE L1 -3916 2299 1884 1700 178 4 11 chr17 67509159 67509440 -17929040 - AluJo SINE Alu -13 299 21 192 167 0 0 chr17 67509449 67509497 -17928983 + (TA)n Simple_repeat Simple_repeat 2 49 0 439 120 67 0 chr17 67510103 67510178 -17928302 + FLAM_A SINE Alu 35 114 -28 23 0 0 0 chr17 67510178 67510201 -17928279 + AT_rich Low_complexity Low_complexity 1 23 0 421 299 70 21 chr17 67510237 67510347 -17928133 - MIR SINE MIR -2 260 136 2824 101 0 0 chr17 67510347 67510722 -17927758 + THE1C LTR MaLR 1 375 0 421 299 70 21 chr17 67510722 67510798 -17927682 - MIR SINE MIR -126 136 65 319 235 0 47 chr17 67510902 67510987 -17927493 - MIR3 SINE MIR -15 193 113 3340 152 18 25 chr17 67511243 67511809 -17926671 + MER68 LTR ERV1 1 562 0 3488 62 2 35 chr17 67511930 67512155 -17926325 - L1PB1 LINE L1 0 6151 5920 2271 116 0 0 chr17 67512155 67512465 -17926015 - AluSg SINE Alu 0 310 1 3488 62 2 35 chr17 67512465 67512719 -17925761 - L1PB1 LINE L1 -231 5920 5688 2889 173 70 0 chr17 67512748 67513246 -17925234 + MLT1F LTR MaLR 3 535 -7 403 254 57 6 chr17 67513445 67513622 -17924858 + L1ME3A LINE L1 5780 5965 -205 1854 106 0 0 chr17 67514092 67514329 -17924151 - AluSg/x SINE Alu -7 303 67 294 264 22 11 chr17 67515398 67515489 -17922991 + MER103 DNA DNA 3 94 -72 372 219 17 8 chr17 67515539 67515658 -17922822 + CT-rich Low_complexity Low_complexity 3 122 0 1080 145 0 0 chr17 67516038 67516197 -17922283 - AluJb SINE Alu -17 295 137 1843 110 0 58 chr17 67516501 67516793 -17921687 - AluJo SINE Alu -37 275 1 291 167 0 0 chr17 67518196 67518244 -17920236 + MLT1K LTR MaLR 138 185 -403 500 289 39 15 chr17 67518244 67518448 -17920032 + MIR SINE MIR 4 212 -50 265 340 48 0 chr17 67518628 67518731 -17919749 + L2 LINE L2 3164 3271 -1 829 130 0 8 chr17 67519163 67519286 -17919194 + FLAM_C SINE Alu 1 122 -21 2311 87 3 10 chr17 67519818 67520116 -17918364 - AluSx SINE Alu -16 296 1 24 32 0 0 chr17 67520133 67520164 -17918316 + AT_rich Low_complexity Low_complexity 1 31 0 1899 101 0 107 chr17 67520368 67520729 -17917751 + AluSx SINE Alu 1 327 0 1647 153 27 27 chr17 67520844 67521145 -17917335 + AluJb SINE Alu 1 301 -11 208 325 145 10 chr17 67521355 67521666 -17916814 - L2 LINE L2 -2502 812 460 1054 143 0 0 chr17 67521816 67521963 -17916517 - FRAM SINE Alu -22 154 8 793 139 114 0 chr17 67521984 67522142 -17916338 - L1MB7 LINE L1 -19 6165 5990 2155 138 0 6 chr17 67522148 67522460 -17916020 - AluSx SINE Alu -2 310 1 300 175 0 0 chr17 67522619 67522682 -17915798 + (TGGA)n Simple_repeat Simple_repeat 3 65 0 316 258 8 81 chr17 67523500 67523624 -17914856 - MIR3 SINE MIR -11 197 83 1806 157 41 0 chr17 67523632 67523926 -17914554 + AluJo SINE Alu 5 310 -2 729 191 14 7 chr17 67524032 67524179 -17914301 + L1MA10 LINE L1 6178 6325 -9 26 30 0 0 chr17 67524343 67524376 -17914104 + AT_rich Low_complexity Low_complexity 1 33 0 510 234 80 48 chr17 67525325 67525513 -17912967 + LTR33 LTR ERVL 21 214 -307 347 203 42 68 chr17 67525562 67525680 -17912800 + LTR33 LTR ERVL 349 463 -58 2214 127 0 10 chr17 67526170 67526484 -17911996 - AluSx SINE Alu -1 311 1 1395 166 112 8 chr17 67526488 67526747 -17911733 - AluJo SINE Alu -14 298 13 364 118 0 0 chr17 67526747 67526870 -17911610 + AluS SINE Alu 232 354 0 540 148 57 0 chr17 67526986 67527074 -17911406 + AluJ/FLAM SINE Alu 2 94 -218 377 248 28 0 chr17 67527078 67527187 -17911293 + L1ME2 LINE L1 6050 6161 -3 2023 103 21 18 chr17 67527249 67527554 -17910926 - AluSx SINE Alu 0 306 1 265 228 156 66 chr17 67527600 67527767 -17910713 + L2 LINE L2 2899 3080 -192 2266 87 23 16 chr17 67528243 67528552 -17909928 - AluSx SINE Alu -1 311 1 184 293 0 17 chr17 67528969 67529027 -17909453 - MIR3 SINE MIR -6 202 146 1943 143 31 0 chr17 67529471 67529758 -17908722 - AluSx SINE Alu -16 296 1 1137 151 0 0 chr17 67529969 67530148 -17908332 + L1MC1 LINE L1 6153 6331 -2 1711 139 77 15 chr17 67530158 67530432 -17908048 + AluJb SINE Alu 1 291 -21 316 291 63 53 chr17 67530638 67530827 -17907653 - MIR SINE MIR -14 248 58 230 46 0 123 chr17 67530930 67530995 -17907485 + (TCC)n Simple_repeat Simple_repeat 1 57 0 22 35 0 0 chr17 67531177 67531206 -17907274 + GC_rich Low_complexity Low_complexity 1 29 0 242 196 0 0 chr17 67532273 67532319 -17906161 + MER81 DNA DNA 55 100 -14 249 363 6 6 chr17 67532725 67532904 -17905576 + (CCCTA)n Simple_repeat Simple_repeat 2 180 0 * 385 236 0 92 chr17 67532784 67532979 -17905501 + C-rich Low_complexity Low_complexity 3 179 0 240 222 0 0 chr17 67532982 67533054 -17905426 + CT-rich Low_complexity Low_complexity 1 72 0 338 256 44 0 chr17 67533925 67534015 -17904465 - MIR SINE MIR -110 152 59 333 202 147 18 chr17 67534136 67534245 -17904235 - L2 LINE L2 -251 3021 2899 1958 114 10 49 chr17 67534435 67534741 -17903739 + AluSx SINE Alu 1 294 -18 209 268 42 42 chr17 67535371 67535442 -17903038 - L2 LINE L2 0 3313 3243 188 304 38 87 chr17 67535784 67535818 -17902662 - L2 LINE L2 -454 2860 2826 2074 109 36 17 chr17 67535818 67536120 -17902360 + AluSg SINE Alu 2 309 -1 188 304 38 87 chr17 67536120 67536269 -17902211 - L2 LINE L2 -488 2826 2686 294 236 209 36 chr17 67536281 67536391 -17902089 - MER5B DNA MER1_type -1 177 49 2064 142 3 0 chr17 67536413 67536724 -17901756 - AluSx SINE Alu 0 312 1 192 179 0 0 chr17 67536727 67536766 -17901714 + T-rich Low_complexity Low_complexity 1 39 0 646 236 0 0 chr17 67536771 67536898 -17901582 - FLAM_A SINE Alu -6 127 1 202 196 22 0 chr17 67536912 67536958 -17901522 - MER5B DNA MER1_type -124 54 8 957 154 43 37 chr17 67536959 67537147 -17901333 + MER20 DNA MER1_type 31 219 0 883 177 17 61 chr17 67537286 67537343 -17901137 + AluJo SINE Alu 86 144 -168 2022 121 3 38 chr17 67537343 67537657 -17900823 + AluSx SINE Alu 1 303 -9 883 177 17 61 chr17 67537657 67537780 -17900700 + AluJo SINE Alu 144 258 -54 2223 131 23 28 chr17 67538653 67538928 -17899552 - MLT1B LTR MaLR 0 390 115 2186 121 0 7 chr17 67538928 67539235 -17899245 - AluSg SINE Alu -5 305 1 1802 131 17 34 chr17 67539238 67539536 -17898944 - AluSx SINE Alu -17 295 3 2223 131 23 28 chr17 67539536 67539645 -17898835 - MLT1B LTR MaLR -277 113 4 2469 66 10 0 chr17 67540151 67540452 -17898028 + AluSc SINE Alu 1 304 -5 2089 113 36 3 chr17 67540456 67540758 -17897722 + AluSx SINE Alu 1 312 0 2298 119 0 0 chr17 67541431 67541734 -17896746 - AluSx SINE Alu -9 303 1 3638 158 22 11 chr17 67541753 67542399 -17896081 - L1MB1 LINE L1 -1 6167 5515 659 212 0 0 chr17 67542577 67542690 -17895790 - FLAM_A SINE Alu -29 113 1 262 273 59 80 chr17 67542711 67542796 -17895684 - MIR SINE MIR -27 235 150 1999 125 0 40 chr17 67542796 67543117 -17895363 - AluSx SINE Alu 0 309 1 262 273 59 80 chr17 67543117 67543217 -17895263 - MIR SINE MIR -112 150 53 328 262 32 23 chr17 67543587 67543724 -17894756 - MIR SINE MIR 0 208 75 2372 102 3 0 chr17 67544183 67544487 -17893993 + AluSq SINE Alu 1 305 -8 2243 97 0 40 chr17 67545145 67545179 -17893301 - AluSc SINE Alu -1 308 274 198 0 0 0 chr17 67545179 67545201 -17893279 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 2243 97 0 40 chr17 67545201 67545487 -17892993 - AluSc SINE Alu -35 274 1 1318 257 58 20 chr17 67545489 67546073 -17892407 - L1MB1 LINE L1 -945 5201 4596 312 215 55 75 chr17 67546078 67546297 -17892183 - L1MDb LINE L1 -4931 1475 1253 2352 107 0 3 chr17 67547370 67547678 -17890802 - AluSg SINE Alu -3 307 1 2210 101 14 0 chr17 67548873 67549170 -17889310 - AluSc SINE Alu -8 301 1 318 26 0 0 chr17 67549750 67549789 -17888691 + (TG)n Simple_repeat Simple_repeat 2 40 0 22 35 0 0 chr17 67549992 67550021 -17888459 + AT_rich Low_complexity Low_complexity 1 29 0 2009 73 4 0 chr17 67550499 67550746 -17887734 - AluSc SINE Alu -1 308 61 718 317 147 5 chr17 67550994 67551416 -17887064 - MLT1G1 LTR MaLR -7 588 31 594 242 0 0 chr17 67551793 67552026 -17886454 + (CCCA)n Simple_repeat Simple_repeat 1 233 0 200 339 0 0 chr17 67552027 67552086 -17886394 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 468 123 0 0 chr17 67552086 67552159 -17886321 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 465 280 71 6 chr17 67552768 67552929 -17885551 - MIR SINE MIR -64 144 21 1329 115 96 10 chr17 67553448 67553657 -17884823 - AluSg/x SINE Alu -1 311 85 1365 148 44 0 chr17 67553694 67553897 -17884583 - AluSg/x SINE Alu -8 302 91 335 341 40 8 chr17 67554325 67554451 -17884029 + MIR SINE MIR 63 192 -70 278 49 0 24 chr17 67554567 67554608 -17883872 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 368 227 236 0 chr17 67555757 67555867 -17882613 - L3 LINE CR1 -546 1031 896 576 276 8 0 chr17 67556276 67556403 -17882077 + MIR SINE MIR 19 146 -62 597 227 0 0 chr17 67556720 67556892 -17881588 + (CA)n Simple_repeat Simple_repeat 1 172 0 188 418 8 0 chr17 67557042 67557176 -17881304 - L2 LINE L2 0 3313 3179 386 268 123 57 chr17 67557413 67557730 -17880750 - L2 LINE L2 -124 3148 2811 276 265 59 0 chr17 67558889 67558957 -17879523 + MIR SINE MIR 74 145 -63 258 209 30 45 chr17 67559063 67559130 -17879350 - L2 LINE L2 -193 3079 3014 1102 191 0 11 chr17 67559338 67559526 -17878954 - AluSx SINE Alu -126 186 1 549 282 46 0 chr17 67559570 67559765 -17878715 - HAL1 LINE L1 -849 1658 1455 329 229 167 10 chr17 67559885 67559981 -17878499 + L2 LINE L2 3203 3313 0 705 161 0 0 chr17 67560029 67560141 -17878339 - AluJo/FRAM SINE Alu -1 311 200 940 200 0 0 chr17 67560141 67560296 -17878184 - AluJo SINE Alu -73 239 85 2236 112 14 0 chr17 67560299 67560594 -17877886 - AluSx SINE Alu -13 299 1 21 36 0 0 chr17 67560665 67560693 -17877787 + AT_rich Low_complexity Low_complexity 1 28 0 2395 78 0 3 chr17 67560742 67561049 -17877431 - AluY SINE Alu -5 306 1 1811 158 3 23 chr17 67561053 67561356 -17877124 - AluJo SINE Alu -15 297 1 300 293 19 7 chr17 67561446 67561471 -17877009 - L1MC/D LINE L1 -554 5616 5593 2265 116 3 0 chr17 67561471 67561772 -17876708 + AluSx SINE Alu 1 302 -10 300 293 19 7 chr17 67561772 67561853 -17876627 - L1MC/D LINE L1 -577 5593 5534 7945 74 8 1 chr17 67562250 67563212 -17875268 - LTR5 LTR ERVK 0 969 1 374 258 72 30 chr17 67563332 67563499 -17874981 - MER113 DNA MER1_type? -10 511 338 1806 142 21 18 chr17 67563512 67563794 -17874686 - AluJo SINE Alu -23 289 7 2281 113 0 3 chr17 67563857 67564167 -17874313 - AluSg SINE Alu -1 309 1 328 234 82 25 chr17 67564211 67564369 -17874111 - MER113 DNA MER1_type? -344 177 11 918 174 47 0 chr17 67566791 67566947 -17871533 - AluJb SINE Alu -12 300 134 1900 162 44 0 chr17 67566947 67567244 -17871236 - AluSx SINE Alu -2 310 1 918 174 47 0 chr17 67567244 67567259 -17871221 - AluJb SINE Alu -178 134 121 483 57 143 0 chr17 67567271 67567341 -17871139 - MER41B LTR ERV1 -385 250 171 1934 160 13 3 chr17 67567343 67567643 -17870837 - AluSx SINE Alu -9 303 1 1325 220 45 7 chr17 67567827 67568113 -17870367 - AluJb SINE Alu -15 297 1 21 0 0 0 chr17 67568138 67568159 -17870321 + AT_rich Low_complexity Low_complexity 1 21 0 672 95 0 0 chr17 67568163 67568247 -17870233 - AluSq/x SINE Alu -195 118 35 27 0 0 0 chr17 67568719 67568746 -17869734 + AT_rich Low_complexity Low_complexity 1 27 0 1317 131 0 6 chr17 67568935 67569118 -17869362 - AluY SINE Alu -129 182 1 2342 199 42 65 chr17 67569164 67569813 -17868667 - LTR8A LTR ERV1 0 727 94 428 71 0 0 chr17 67569913 67569969 -17868511 - MER20 DNA MER1_type -134 85 30 1622 134 91 4 chr17 67571394 67571681 -17866799 + AluSg SINE Alu 8 316 0 419 256 24 0 chr17 67571686 67571811 -17866669 - L1ME4a LINE L1 -253 5868 5741 506 285 82 0 chr17 67572467 67572625 -17865855 + MIR SINE MIR 92 262 0 224 264 99 11 chr17 67572604 67572695 -17865785 + L2 LINE L2 3214 3312 -1 * 1956 135 35 0 chr17 67573118 67573400 -17865080 - AluJo SINE Alu -20 292 1 1611 164 82 0 chr17 67573512 67573819 -17864661 + AluJb SINE Alu 1 312 0 2383 113 0 0 chr17 67573958 67574259 -17864221 + AluSx SINE Alu 1 301 -11 300 245 32 11 chr17 67574373 67574467 -17864013 + L3b LINE CR1 1324 1419 -164 1521 194 39 22 chr17 67575042 67575397 -17863083 - L1MB7 LINE L1 0 6184 5824 2358 92 7 3 chr17 67575403 67575709 -17862771 - AluSx SINE Alu -5 307 1 240 35 0 0 chr17 67575849 67575878 -17862602 + (TG)n Simple_repeat Simple_repeat 2 30 0 3134 78 20 24 chr17 67576839 67577289 -17861191 + LTR7 LTR ERV1 1 448 -2 227 401 12 12 chr17 67577880 67578042 -17860438 + MER5A DNA MER1_type 28 189 0 333 341 57 0 chr17 67579006 67579129 -17859351 + L2 LINE L2 3143 3272 0 809 239 0 0 chr17 67579226 67579422 -17859058 - AluJb SINE Alu 0 316 121 363 320 44 17 chr17 67579529 67579710 -17858770 - MIR SINE MIR -51 211 26 2224 130 3 0 chr17 67579717 67580024 -17858456 - AluSx SINE Alu -4 308 1 302 140 0 0 chr17 67581297 67581347 -17857133 - MER115 DNA AcHobo 0 693 644 2439 98 0 0 chr17 67582085 67582392 -17856088 - AluSq SINE Alu -6 307 1 445 279 73 69 chr17 67582735 67582968 -17855512 + MIR SINE MIR 29 262 0 189 0 0 0 chr17 67583436 67583457 -17855023 + (T)n Simple_repeat Simple_repeat 1 21 0 260 371 17 0 chr17 67584703 67584878 -17853602 + (CCA)n Simple_repeat Simple_repeat 1 178 0 195 306 0 0 chr17 67584878 67584927 -17853553 - L2 LINE L2 -11 3261 3213 2158 112 0 0 chr17 67584935 67585213 -17853267 - AluSg SINE Alu -3 307 30 276 242 20 30 chr17 67585585 67585684 -17852796 + LTR67 LTR ERVL 460 557 0 649 188 100 44 chr17 67586320 67586381 -17852099 - MER58B DNA MER1_type -2079 341 285 2233 98 0 0 chr17 67586381 67586658 -17851822 - AluSx SINE Alu -35 277 1 649 188 100 44 chr17 67586658 67586756 -17851724 - MER58B DNA MER1_type -2135 285 173 2308 79 4 0 chr17 67586766 67587073 -17851407 - AluY SINE Alu 0 308 1 2037 120 7 20 chr17 67587853 67588154 -17850326 + AluJo SINE Alu 1 297 -15 879 280 64 48 chr17 67588161 67588816 -17849664 + L2 LINE L2 2643 3313 0 223 396 106 8 chr17 67588930 67589195 -17849285 - L2 LINE L2 -850 2464 2174 24 32 0 0 chr17 67589248 67589279 -17849201 + AT_rich Low_complexity Low_complexity 1 31 0 2081 133 3 0 chr17 67589324 67589609 -17848871 - AluSx SINE Alu -15 297 12 387 225 179 20 chr17 67590568 67590719 -17847761 + MER5B DNA MER1_type 4 178 0 595 295 20 16 chr17 67590784 67591028 -17847452 - MLT1J LTR MaLR -266 245 1 321 26 0 0 chr17 67591067 67591105 -17847375 + (CATAA)n Simple_repeat Simple_repeat 3 40 0 196 320 0 0 chr17 67591231 67591281 -17847199 - L2 LINE L2 -24 3248 3199 272 307 11 11 chr17 67591412 67591500 -17846980 + MIR SINE MIR 118 205 -57 1828 151 49 25 chr17 67591976 67592341 -17846139 + THE1C LTR MaLR 1 374 -1 1934 142 31 7 chr17 67593021 67593309 -17845171 - AluJo SINE Alu -17 295 1 186 283 0 19 chr17 67593961 67594014 -17844466 - MIR SINE MIR -128 134 83 2321 126 0 0 chr17 67594421 67594731 -17843749 + AluSx SINE Alu 1 310 -2 322 301 39 0 chr17 67594737 67594840 -17843640 - L1ME4a LINE L1 -42 6079 5973 425 219 25 17 chr17 67594918 67595037 -17843443 - MER58C DNA MER1_type -14 201 82 1014 113 5 62 chr17 67595064 67595149 -17843331 + L1M3 LINE L1 5254 5342 -838 2019 146 3 0 chr17 67595149 67595437 -17843043 + AluSx SINE Alu 4 292 -20 1014 113 5 62 chr17 67595437 67595632 -17842848 + L1M3 LINE L1 5342 5494 -686 2260 119 0 3 chr17 67595808 67596119 -17842361 - AluSg SINE Alu 0 310 1 190 164 0 148 chr17 67596642 67596703 -17841777 - L2 LINE L2 -24 3248 3197 534 295 3 0 chr17 67597255 67597607 -17840873 + (TG)n Simple_repeat Simple_repeat 1 353 0 2017 133 52 33 chr17 67597612 67597980 -17840500 - THE1C LTR MaLR 0 375 1 426 229 0 0 chr17 67597981 67598189 -17840291 + (TG)n Simple_repeat Simple_repeat 1 208 0 301 277 0 88 chr17 67598410 67598547 -17839933 + L2 LINE L2 3138 3262 -10 512 178 47 84 chr17 67598693 67598884 -17839596 + MER53 DNA DNA 2 185 -4 329 286 65 37 chr17 67599243 67599445 -17839035 - MIR SINE MIR -51 211 2 751 168 12 0 chr17 67599585 67599752 -17838728 + (TCCA)n Simple_repeat Simple_repeat 2 170 0 568 184 14 0 chr17 67599771 67599918 -17838562 + (TCCA)n Simple_repeat Simple_repeat 3 151 0 668 128 10 87 chr17 67599953 67600148 -17838332 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 352 222 19 0 chr17 67600206 67600314 -17838166 + (TCCA)n Simple_repeat Simple_repeat 2 111 0 231 190 0 0 chr17 67600352 67600410 -17838070 + (TCCA)n Simple_repeat Simple_repeat 3 60 0 213 186 200 29 chr17 67600411 67600481 -17837999 - L2 LINE L2 -47 3225 3144 767 148 26 148 chr17 67601336 67601364 -17837116 - MER20 DNA MER1_type -17 202 172 1985 146 0 17 chr17 67601364 67601702 -17836778 - AluJo SINE Alu 0 312 1 767 148 26 148 chr17 67601702 67601903 -17836577 - MER20 DNA MER1_type -47 172 1 423 0 0 0 chr17 67602533 67602580 -17835900 + (TG)n Simple_repeat Simple_repeat 2 48 0 200 204 0 0 chr17 67602864 67602908 -17835572 + CT-rich Low_complexity Low_complexity 1 44 0 2256 115 3 6 chr17 67603234 67603547 -17834933 - AluSx SINE Alu 0 312 1 5174 89 34 0 chr17 67603555 67604287 -17834193 - L1PA15 LINE L1 -4 6161 5405 472 306 85 20 chr17 67604608 67604807 -17833673 + MIR SINE MIR 51 262 0 480 339 26 26 chr17 67605196 67605423 -17833057 - MIR SINE MIR -8 254 28 198 306 32 0 chr17 67605523 67605585 -17832895 - MIR SINE MIR -122 140 77 674 233 37 25 chr17 67605679 67605842 -17832638 + MER45A DNA AcHobo 1 165 -13 564 77 0 0 chr17 67605959 67606037 -17832443 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 1835 167 7 10 chr17 67606037 67606320 -17832160 - AluSx SINE Alu -28 284 1 1093 101 0 0 chr17 67606356 67606494 -17831986 - AluJb SINE Alu -174 138 1 517 148 10 10 chr17 67607174 67607275 -17831205 + MER53 DNA DNA 9 109 -80 415 307 212 6 chr17 67607371 67607550 -17830930 - MIR SINE MIR -27 235 20 310 290 226 0 chr17 67607551 67607706 -17830774 - HAL1 LINE L1 -1216 1291 1102 249 33 0 0 chr17 67607721 67607751 -17830729 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 910 168 0 7 chr17 67607775 67607924 -17830556 - FRAM SINE Alu -20 156 9 1689 118 48 69 chr17 67609060 67609400 -17829080 - AluSx SINE Alu 0 334 1 323 310 69 29 chr17 67609569 67609743 -17828737 + MIR SINE MIR 48 228 -34 380 290 134 27 chr17 67609912 67610098 -17828382 - L2 LINE L2 -6 3307 3102 2169 101 4 0 chr17 67610442 67610755 -17827725 + AluSc SINE Alu 1 314 0 2110 152 0 7 chr17 67611332 67611641 -17826839 - AluJo SINE Alu -5 307 1 195 42 0 0 chr17 67612215 67612239 -17826241 + (CTGGGG)n Simple_repeat Simple_repeat 3 26 0 1838 112 9 118 chr17 67614154 67614493 -17823987 + AluSx SINE Alu 1 302 -10 1186 79 17 6 chr17 67614800 67614977 -17823503 - L1MA5A LINE L1 -3 6294 6116 738 135 88 78 chr17 67614977 67615058 -17823422 + L1MA5A LINE L1 5964 6043 -254 1776 168 7 7 chr17 67615058 67615355 -17823125 + AluJb SINE Alu 1 297 -15 738 135 88 78 chr17 67615355 67615466 -17823014 + L1MA5A LINE L1 6043 6158 -139 1933 119 66 33 chr17 67615709 67616011 -17822469 + AluJb SINE Alu 1 312 0 882 173 208 0 chr17 67616406 67616632 -17821848 - L1MB7 LINE L1 0 6184 5912 1673 163 10 0 chr17 67616877 67617183 -17821297 - L1MB7 LINE L1 -272 5906 5598 208 313 0 12 chr17 67617447 67617527 -17820953 + GA-rich Low_complexity Low_complexity 3 81 0 240 167 0 0 chr17 67618175 67618223 -17820257 + (TA)n Simple_repeat Simple_repeat 2 49 0 731 167 0 7 chr17 67618228 67618372 -17820108 - L1PB1 LINE L1 -81 6070 5928 345 347 20 40 chr17 67618395 67618563 -17819917 - MER5B DNA MER1_type -1 188 12 1016 177 28 0 chr17 67618583 67618764 -17819716 + MER5A DNA MER1_type 4 189 0 550 283 91 5 chr17 67618769 67618956 -17819524 + MIR SINE MIR 58 260 -2 2177 128 0 3 chr17 67620384 67620697 -17817783 - AluSx SINE Alu 0 312 1 414 290 90 14 chr17 67620723 67620868 -17817612 - MER5B DNA MER1_type -19 159 4 2360 105 0 0 chr17 67620986 67621282 -17817198 - AluSx SINE Alu -16 296 1 532 148 0 4 chr17 67621398 67621508 -17816972 - L1M4 LINE L1 -410 5768 5662 239 146 0 0 chr17 67621510 67621551 -17816929 - L1MB3 LINE L1 -11 6172 6132 2289 83 0 3 chr17 67621551 67621841 -17816639 - AluSg SINE Alu -21 289 1 533 218 24 0 chr17 67621843 67621967 -17816513 - L1MB3 LINE L1 -354 5829 5703 994 113 51 26 chr17 67622210 67622405 -17816075 + Tigger2 DNA MER2_type 1 200 -2518 551 174 149 37 chr17 67622384 67622545 -17815935 + Tigger2 DNA MER2_type 2530 2708 -10 * 255 31 0 0 chr17 67622611 67622643 -17815837 + (CA)n Simple_repeat Simple_repeat 2 33 0 333 0 0 0 chr17 67623919 67623956 -17814524 + (TG)n Simple_repeat Simple_repeat 1 37 0 309 26 0 0 chr17 67623955 67623993 -17814487 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 824 189 0 0 chr17 67625938 67626070 -17812410 + FLAM_C SINE Alu 2 133 0 222 254 201 36 chr17 67626255 67626453 -17812027 - MIR SINE MIR 0 262 16 243 202 39 79 chr17 67627020 67627198 -17811282 + (ATATG)n Simple_repeat Simple_repeat 5 175 0 303 225 66 0 chr17 67627258 67627409 -17811071 + (TTATA)n Simple_repeat Simple_repeat 5 165 0 200 242 60 27 chr17 67627442 67627591 -17810889 + (ATATG)n Simple_repeat Simple_repeat 2 155 0 2197 106 3 0 chr17 67627923 67628233 -17810247 + AluSg SINE Alu 1 311 0 256 175 0 0 chr17 67628865 67628905 -17809575 - MER5A DNA MER1_type -2 187 148 803 125 0 0 chr17 67628918 67629038 -17809442 - HERVK3 LTR ERVK -2439 4804 4685 * 1083 50 14 0 chr17 67629037 67629176 -17809304 - HERVK3 LTR ERVK -2936 4307 4167 421 134 216 0 chr17 67629194 67629291 -17809189 - MER5A DNA MER1_type -71 118 1 1964 132 7 7 chr17 67631321 67631601 -17806879 + AluSx SINE Alu 1 280 -32 188 340 82 21 chr17 67631760 67631857 -17806623 - L3b LINE CR1 -185 1398 1296 378 169 242 48 chr17 67633255 67633379 -17805101 - L2 LINE L2 0 3313 3166 928 241 113 62 chr17 67633448 67633784 -17804696 - MLT1H LTR MaLR -147 402 50 334 311 64 32 chr17 67633960 67634186 -17804294 - L2 LINE L2 -266 3006 2777 206 217 152 0 chr17 67634382 67634428 -17804052 + L2 LINE L2 3149 3201 -71 326 60 0 20 chr17 67634468 67634518 -17803962 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 414 253 118 1 chr17 67634518 67634657 -17803823 + MIR SINE MIR 20 177 -31 264 217 0 0 chr17 67635023 67635115 -17803365 + (TGG)n Simple_repeat Simple_repeat 1 92 0 1944 169 0 3 chr17 67635476 67635789 -17802691 - AluJb SINE Alu 0 312 1 266 297 59 30 chr17 67635790 67635891 -17802589 - L2 LINE L2 -13 3300 3197 412 275 225 0 chr17 67636141 67636301 -17802179 - MER91A DNA MER1_type 0 196 1 184 298 44 122 chr17 67636412 67636593 -17801887 + L2 LINE L2 3057 3223 -49 1604 97 43 127 chr17 67636983 67637377 -17801103 - AluSq SINE Alu 0 385 17 359 184 126 23 chr17 67637477 67637564 -17800916 - AluSc SINE Alu -18 281 186 1726 86 0 5 chr17 67637564 67637784 -17800696 - AluSq SINE Alu -94 219 1 1956 102 4 0 chr17 67638281 67638537 -17799943 + AluSc SINE Alu 1 257 -52 213 348 148 22 chr17 67638664 67638894 -17799586 - L2 LINE L2 -49 3264 3006 249 192 128 0 chr17 67639089 67639167 -17799313 + MLT1J2 LTR MaLR 49 136 -314 222 159 43 0 chr17 67640564 67640633 -17797847 + CT-rich Low_complexity Low_complexity 2 73 0 414 287 104 0 chr17 67640737 67640852 -17797628 - L2 LINE L2 -7 3265 3139 736 166 11 17 chr17 67641463 67641644 -17796836 + (CAT)n Simple_repeat Simple_repeat 1 180 0 290 169 15 0 chr17 67641648 67641713 -17796767 + (CACCAT)n Simple_repeat Simple_repeat 5 70 0 211 257 88 35 chr17 67642901 67643014 -17795466 + MIR SINE MIR 86 204 -58 231 83 28 0 chr17 67643136 67643172 -17795308 - MLT1E2 LTR MaLR -4 620 584 1505 217 23 14 chr17 67643221 67643566 -17794914 - MLT1A1 LTR MaLR -10 355 8 1362 212 89 38 chr17 67643542 67643933 -17794547 - MLT1E2 LTR MaLR -80 546 136 * 252 325 77 8 chr17 67644057 67644174 -17794306 + MIR3 SINE MIR 52 176 -32 342 254 21 12 chr17 67644388 67644513 -17793967 - MER5A DNA MER1_type -49 129 15 405 309 74 0 chr17 67644537 67644686 -17793794 + MIR SINE MIR 24 183 -79 2267 102 0 20 chr17 67645342 67645646 -17792834 - AluSx SINE Alu -14 298 1 2170 133 0 16 chr17 67648188 67648503 -17789977 - AluSx SINE Alu -1 311 2 287 59 0 0 chr17 67648702 67648736 -17789744 - tRNA-Cys-TGC tRNA tRNA -38 37 4 442 264 69 69 chr17 67649536 67649782 -17788698 - LTR16B LTR ERVL 0 464 219 825 235 37 8 chr17 67649828 67650071 -17788409 - LTR16B LTR ERVL -203 261 12 394 260 87 0 chr17 67650145 67650249 -17788231 - L2 LINE L2 -2 3311 3199 963 204 23 27 chr17 67650256 67650476 -17788004 + MER20 DNA MER1_type 1 219 0 2454 105 18 26 chr17 67650797 67650918 -17787562 + L1MB3 LINE L1 5796 5916 -267 4250 122 9 6 chr17 67650918 67651551 -17786929 + MER41B LTR ERV1 1 635 0 2454 105 18 26 chr17 67651551 67651820 -17786660 + L1MB3 LINE L1 5916 6183 0 264 293 79 70 chr17 67652034 67652326 -17786154 - L1MDa LINE L1 -749 2152 1864 7867 89 7 15 chr17 67652326 67653406 -17785074 + MER11C LTR ERVK 1 1071 0 264 293 79 70 chr17 67653406 67653652 -17784828 - L1MDa LINE L1 -1037 1864 1544 228 232 11 32 chr17 67653946 67654041 -17784439 + (TA)n Simple_repeat Simple_repeat 1 93 0 792 169 0 0 chr17 67654299 67654453 -17784027 + (TCCA)n Simple_repeat Simple_repeat 3 156 0 598 316 13 17 chr17 67655142 67655379 -17783101 + MIR SINE MIR 17 252 -10 2045 141 165 5 chr17 67655760 67656129 -17782351 + MSTA LTR MaLR 1 428 0 2385 82 0 3 chr17 67656792 67657085 -17781395 + AluSg SINE Alu 1 292 -18 1235 236 38 18 chr17 67657114 67657453 -17781027 + MLT1C LTR MaLR 120 465 -2 366 289 80 64 chr17 67657462 67657598 -17780882 - L1ME LINE L1 -336 5785 5644 1884 157 9 28 chr17 67657598 67657916 -17780564 + AluJo SINE Alu 1 312 0 366 289 80 64 chr17 67657916 67657966 -17780514 - L1ME LINE L1 -477 5644 5596 966 98 0 15 chr17 67658008 67658140 -17780340 - FLAM_C SINE Alu -13 130 1 1623 189 10 17 chr17 67658563 67658860 -17779620 - AluJo SINE Alu -17 295 1 2231 100 4 0 chr17 67658868 67659179 -17779301 - AluSx SINE Alu 0 316 5 2445 85 0 19 chr17 67660186 67660504 -17777976 + AluSx SINE Alu 1 312 0 222 272 33 11 chr17 67660804 67660896 -17777584 - L2 LINE L2 -557 2757 2664 1904 140 28 130 chr17 67661085 67661348 -17777132 - MSTB LTR MaLR -3 414 229 2073 149 13 0 chr17 67661348 67661656 -17776824 - AluSx SINE Alu 0 312 1 1904 140 28 130 chr17 67661656 67661864 -17776616 - MSTB LTR MaLR -188 229 1 1620 164 59 3 chr17 67662343 67662629 -17775851 + AluJb SINE Alu 9 310 -2 2905 166 21 10 chr17 67662793 67663312 -17775168 + L1MB7 LINE L1 5606 6130 -54 685 225 117 62 chr17 67663511 67663705 -17774775 - ORSL DNA AcHobo -22 253 42 1873 159 3 10 chr17 67663705 67664001 -17774479 + AluJb SINE Alu 1 294 -18 685 225 117 62 chr17 67664001 67664046 -17774434 - ORSL DNA AcHobo -233 42 1 1156 150 19 19 chr17 67664236 67664443 -17774037 + Tigger2 DNA MER2_type 4 210 -2508 846 175 13 7 chr17 67664442 67664596 -17773884 + Tigger2 DNA MER2_type 2564 2718 0 * 245 333 75 0 chr17 67664822 67664915 -17773565 - MER91A DNA MER1_type -4 192 93 242 298 231 0 chr17 67664923 67665027 -17773453 - MER91A DNA MER1_type -26 170 43 2044 143 13 19 chr17 67665205 67665519 -17772961 - AluSx SINE Alu 0 312 1 318 87 0 0 chr17 67665675 67665721 -17772759 + (CA)n Simple_repeat Simple_repeat 2 47 0 1288 157 5 0 chr17 67665763 67665973 -17772507 - MLT1B LTR MaLR -1 389 179 2698 282 101 16 chr17 67665980 67667315 -17771165 - L2 LINE L2 -632 2682 1234 2276 145 11 26 chr17 67667663 67668043 -17770437 + THE1C LTR MaLR 2 375 0 2259 113 0 0 chr17 67668137 67668430 -17770050 - AluSq SINE Alu -20 293 1 423 309 111 23 chr17 67669350 67669567 -17768913 + Charlie8 DNA MER1_type 5 240 -2177 620 272 15 24 chr17 67669774 67669980 -17768500 - LTR16A1 LTR ERVL -2 455 252 634 264 104 57 chr17 67670424 67670612 -17767868 - L1ME4a LINE L1 -7 6114 5936 2156 126 7 0 chr17 67670621 67670914 -17767566 + AluSx SINE Alu 1 295 -17 350 204 10 31 chr17 67670914 67671002 -17767478 - L1MC2 LINE L1 -10 6334 6247 634 264 104 57 chr17 67671002 67671027 -17767453 - L1ME4a LINE L1 -185 5936 5914 283 43 22 22 chr17 67671027 67671073 -17767407 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 634 264 104 57 chr17 67671073 67671437 -17767043 - L1ME4a LINE L1 -207 5914 5509 2088 134 42 31 chr17 67671528 67671887 -17766593 + THE1B LTR MaLR 1 363 -1 277 356 75 13 chr17 67671917 67672156 -17766324 + L2 LINE L2 2549 2802 -512 2230 125 7 0 chr17 67672325 67672629 -17765851 - AluSx SINE Alu -6 306 1 224 290 0 16 chr17 67672652 67672714 -17765766 + L2 LINE L2 2995 3055 -217 1737 162 0 61 chr17 67673243 67673539 -17764941 + AluJb SINE Alu 7 284 -28 213 39 0 0 chr17 67673542 67673568 -17764912 + (GAAAA)n Simple_repeat Simple_repeat 3 28 0 546 313 87 26 chr17 67673904 67674249 -17764231 + LTR16C LTR ERVL 93 458 -33 1607 54 0 50 chr17 67674250 67674320 -17764160 + L1MA1 LINE L1 6088 6160 -142 2226 105 3 20 chr17 67674320 67674624 -17763856 + AluSg SINE Alu 1 299 -11 1607 54 0 50 chr17 67674624 67674775 -17763705 + L1MA1 LINE L1 6160 6298 -4 699 189 8 0 chr17 67674872 67675004 -17763476 - FLAM_A SINE Alu 0 133 1 672 13 0 0 chr17 67675071 67675148 -17763332 + (TTCCC)n Simple_repeat Simple_repeat 4 80 0 201 167 0 0 chr17 67675623 67675659 -17762821 + A-rich Low_complexity Low_complexity 1 36 0 1130 225 109 46 chr17 67676626 67677040 -17761440 - LTR16A1 LTR ERVL -2 455 16 230 235 0 0 chr17 67677219 67677270 -17761210 - MIR SINE MIR -51 211 161 349 305 96 10 chr17 67677328 67677525 -17760955 + L1ME4a LINE L1 5694 5907 -214 456 67 0 0 chr17 67677527 67677587 -17760893 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 188 174 72 chr17 67678015 67678153 -17760327 + L1ME4a LINE L1 5968 6119 -2 4062 113 60 8 chr17 67678469 67679087 -17759393 + L1PA16 LINE L1 5517 6166 0 561 265 67 16 chr17 67679132 67679363 -17759117 - MIR SINE MIR 0 262 15 1820 182 0 0 chr17 67679687 67679984 -17758496 - AluJb SINE Alu -14 298 2 565 238 66 17 chr17 67680006 67680187 -17758293 - L1ME3A LINE L1 -8 6162 5973 790 266 144 22 chr17 67680394 67680714 -17757766 - L1ME3A LINE L1 -477 5685 5327 2437 156 34 7 chr17 67681516 67681933 -17756547 + MSTB1 LTR MaLR 1 428 -4 5524 152 47 11 chr17 67682082 67683904 -17754576 - L1MA8 LINE L1 -1 6290 4408 1219 268 25 55 chr17 67684076 67684513 -17753967 + MLT1K LTR MaLR 162 585 -3 1192 230 43 55 chr17 67684779 67685223 -17753257 - MLT1A1 LTR MaLR 0 365 1 216 67 0 0 chr17 67685273 67685303 -17753177 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 211 342 0 13 chr17 67685464 67685540 -17752940 + MIR3 SINE MIR 126 200 -8 2233 102 3 0 chr17 67685553 67685846 -17752634 + AluSc SINE Alu 1 294 -15 210 356 0 23 chr17 67685867 67685954 -17752526 - MIR3 SINE MIR -36 172 88 2335 92 3 28 chr17 67687584 67687901 -17750579 + AluSp SINE Alu 1 309 -4 2006 108 4 0 chr17 67687914 67688172 -17750308 + AluSx SINE Alu 1 259 -53 4475 112 21 41 chr17 67688497 67689202 -17749278 + LTR8 LTR ERV1 1 691 0 304 141 197 0 chr17 67689310 67689381 -17749099 - MIR3 SINE MIR -9 199 115 2360 91 0 0 chr17 67689499 67689796 -17748684 + AluSx SINE Alu 1 297 -15 3376 177 60 45 chr17 67690162 67691257 -17747223 + L1MB7 LINE L1 4598 5675 -509 2284 107 3 0 chr17 67691257 67691556 -17746924 - AluSc SINE Alu -9 300 1 3376 177 60 45 chr17 67691556 67691569 -17746911 + L1MB7 LINE L1 5675 5686 -498 2503 65 0 3 chr17 67691569 67691875 -17746605 - AluY SINE Alu -6 305 1 3376 177 60 45 chr17 67691875 67692273 -17746207 + L1MB7 LINE L1 5686 6160 -24 356 313 23 16 chr17 67692541 67692680 -17745800 + MIR SINE MIR 16 154 -54 201 299 41 0 chr17 67694590 67694687 -17743793 - MIR SINE MIR -102 160 60 2428 77 0 0 chr17 67694814 67695111 -17743369 + AluY SINE Alu 1 297 -14 2099 138 3 0 chr17 67695524 67695828 -17742652 + AluSq SINE Alu 1 305 -8 779 115 9 0 chr17 67695892 67696005 -17742475 - L1MB3 LINE L1 -7 6176 6063 1224 127 49 114 chr17 67696123 67696174 -17742306 - L1MB3 LINE L1 -128 6055 6002 2076 133 0 0 chr17 67696174 67696489 -17741991 + AluSx SINE Alu 2 316 0 1224 127 49 114 chr17 67696489 67696742 -17741738 - L1MB3 LINE L1 -181 6002 5769 1067 212 5 36 chr17 67696840 67697062 -17741418 - MER58A DNA MER1_type -9 215 1 2065 130 49 33 chr17 67697386 67697754 -17740726 + THE1C LTR MaLR 1 374 -1 1536 250 42 14 chr17 67698168 67698596 -17739884 - L1ME1 LINE L1 -6 6160 5721 1030 238 19 0 chr17 67698587 67698852 -17739628 - L1M4 LINE L1 -3500 2646 2377 * 399 280 48 48 chr17 67699662 67699830 -17738650 - MIR SINE MIR -34 228 61 1269 187 23 12 chr17 67699877 67700134 -17738346 - MLT1C LTR MaLR 0 467 208 2057 100 0 17 chr17 67700168 67700467 -17738013 + AluSg SINE Alu 1 294 -16 5430 100 20 15 chr17 67700467 67701270 -17737210 - L1PA13 LINE L1 -10 6153 5347 541 274 98 6 chr17 67701352 67701516 -17736964 + MIR SINE MIR 80 258 -4 469 274 132 44 chr17 67701537 67701925 -17736555 + L2 LINE L2 2748 3155 -158 232 224 0 30 chr17 67701928 67701995 -17736485 - L1MC4 LINE L1 -1339 6703 6639 369 238 119 0 chr17 67701995 67702096 -17736384 + L2 LINE L2 3189 3301 -12 225 0 0 0 chr17 67702098 67702123 -17736357 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 541 242 16 23 chr17 67702352 67702480 -17736000 - MIR SINE MIR -122 140 14 1977 199 75 16 chr17 67703604 67704050 -17734430 + MLT1C LTR MaLR 6 396 0 299 176 0 209 chr17 67704988 67705012 -17733468 - MER103 DNA DNA -7 159 132 1869 75 12 8 chr17 67705012 67705290 -17733190 + AluY SINE Alu 31 309 0 299 176 0 209 chr17 67705290 67705412 -17733068 - MER103 DNA DNA -34 132 43 1172 237 16 4 chr17 67705419 67705664 -17732816 - MIR SINE MIR -10 252 5 375 266 0 0 chr17 67706178 67706257 -17732223 + MER91B DNA MER1_type 5 83 -107 1120 183 5 5 chr17 67706535 67706737 -17731743 - MER20 DNA MER1_type -14 205 4 1188 199 50 50 chr17 67706757 67706794 -17731686 + MER33 DNA MER1_type 3 39 -2546 1979 112 20 33 chr17 67706794 67707099 -17731381 - AluSx SINE Alu -11 301 1 1188 199 50 50 chr17 67707099 67707383 -17731097 + MER33 DNA MER1_type 38 324 0 1941 149 0 6 chr17 67707525 67707840 -17730640 - AluSq SINE Alu 0 313 1 1440 196 7 14 chr17 67708565 67708856 -17729624 - AluJo SINE Alu -23 289 1 588 273 108 26 chr17 67710251 67710482 -17727998 + MIR SINE MIR 10 259 -3 2267 98 0 0 chr17 67710583 67710888 -17727592 + AluSx SINE Alu 1 305 -7 356 342 74 37 chr17 67710898 67711141 -17727339 + L3 LINE CR1 12 263 -1314 259 215 0 77 chr17 67711300 67711365 -17727115 + MIR SINE MIR 152 211 -51 321 157 0 57 chr17 67711728 67711798 -17726682 + MER103 DNA DNA 20 85 -81 1206 142 219 8 chr17 67711813 67712059 -17726421 - AluYa5 SINE Alu -3 298 1 301 253 13 0 chr17 67712100 67712175 -17726305 + MER103 DNA DNA 42 117 -49 942 178 0 0 chr17 67712284 67712430 -17726050 + MER2 DNA MER2_type 1 146 -199 1803 108 0 0 chr17 67712430 67712671 -17725809 - AluSg SINE Alu -67 243 3 25 75 0 0 chr17 67712673 67712726 -17725754 + AT_rich Low_complexity Low_complexity 1 53 0 275 186 0 0 chr17 67712727 67712770 -17725710 + MER2 DNA MER2_type 281 323 -22 268 274 170 7 chr17 67712931 67713066 -17725414 + L1ME4a LINE L1 5942 6098 -23 450 315 38 38 chr17 67713167 67713405 -17725075 + L3 LINE CR1 647 884 -693 441 254 31 15 chr17 67714052 67714182 -17724298 + L3b LINE CR1 1102 1233 -350 414 280 92 58 chr17 67714280 67714487 -17723993 - MIR SINE MIR -3 259 46 1642 164 6 45 chr17 67714597 67714908 -17723572 - AluJo SINE Alu -13 299 1 2323 133 7 61 chr17 67715083 67715321 -17723159 + MLT1B LTR MaLR 1 209 -181 2221 108 0 3 chr17 67715321 67715628 -17722852 + AluSx SINE Alu 1 306 -6 2323 133 7 61 chr17 67715628 67715801 -17722679 + MLT1B LTR MaLR 209 390 0 408 245 123 32 chr17 67715807 67715962 -17722518 - MIR SINE MIR -77 185 17 2034 134 0 10 chr17 67716208 67716522 -17721958 + AluSx SINE Alu 1 311 -1 302 314 126 53 chr17 67717000 67717207 -17721273 - MIR SINE MIR -32 230 9 180 0 0 0 chr17 67717525 67717545 -17720935 + (CAGCC)n Simple_repeat Simple_repeat 1 20 0 961 151 89 192 chr17 67717639 67717713 -17720767 - MLT1A2 LTR MaLR 0 374 294 1995 107 32 32 chr17 67717713 67718023 -17720457 - AluSx SINE Alu -2 310 1 961 151 89 192 chr17 67718023 67718365 -17720115 - MLT1A2 LTR MaLR -80 294 1 1556 171 23 78 chr17 67718780 67719166 -17719314 - MLT1A1 LTR MaLR 0 365 1 347 208 0 10 chr17 67719221 67719317 -17719163 + GA-rich Low_complexity Low_complexity 2 96 0 180 77 0 0 chr17 67720138 67720164 -17718316 + (C)n Simple_repeat Simple_repeat 1 26 0 3539 112 19 4 chr17 67721149 67721633 -17716847 - MER1A DNA MER1_type 0 529 39 192 309 18 0 chr17 67721645 67721700 -17716780 - L2 LINE L2 -49 3264 3209 809 204 32 76 chr17 67722254 67722499 -17715981 + L1MC4 LINE L1 7567 7713 -95 382 76 45 0 chr17 67722510 67722576 -17715904 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 2167 104 3 0 chr17 67723844 67724142 -17714338 + AluSg SINE Alu 1 299 -11 2411 59 0 3 chr17 67724802 67725106 -17713374 - AluY SINE Alu -8 303 1 1980 137 7 0 chr17 67725108 67725400 -17713080 - AluSq SINE Alu -19 294 1 360 283 215 0 chr17 67725683 67725741 -17712739 - MIR SINE MIR -13 249 205 2006 121 0 23 chr17 67725741 67726046 -17712434 + AluSx SINE Alu 1 298 -14 360 283 215 0 chr17 67726046 67726178 -17712302 - MIR SINE MIR -57 205 18 220 272 19 48 chr17 67726229 67726332 -17712148 - L2 LINE L2 0 3313 3214 493 276 162 25 chr17 67726401 67726755 -17711725 - L2 LINE L2 -260 3053 2625 872 180 60 25 chr17 67727233 67727433 -17711047 - MIR SINE MIR -32 230 24 426 311 20 26 chr17 67729085 67729236 -17709244 - MER5A DNA MER1_type -2 187 38 1906 109 41 10 chr17 67729252 67729546 -17708934 - AluSx SINE Alu -5 307 5 222 337 21 32 chr17 67730298 67730393 -17708087 - MER5A DNA MER1_type -27 162 69 2965 98 9 35 chr17 67730401 67731120 -17707360 + L1PB1 LINE L1 5315 6184 0 815 215 31 26 chr17 67731209 67731404 -17707076 - MER20 DNA MER1_type -14 205 10 778 269 149 0 chr17 67733079 67733280 -17705200 - MIR SINE MIR -11 251 21 629 300 78 0 chr17 67733855 67734035 -17704445 - MIR SINE MIR -12 250 57 233 173 0 13 chr17 67734035 67734110 -17704370 + (TA)n Simple_repeat Simple_repeat 2 75 0 2242 97 0 3 chr17 67734167 67734467 -17704013 - AluSp SINE Alu -14 299 1 829 274 107 38 chr17 67734875 67735358 -17703122 + L1ME4a LINE L1 5474 6009 -112 1548 203 62 52 chr17 67735358 67735743 -17702737 - MLT1B LTR MaLR -1 389 1 829 274 107 38 chr17 67735743 67735865 -17702615 + L1ME4a LINE L1 6009 6121 0 2184 102 0 3 chr17 67736004 67736308 -17702172 - AluSx SINE Alu -9 303 1 370 319 37 31 chr17 67736938 67737101 -17701379 + MIR SINE MIR 21 184 -78 203 280 0 0 chr17 67737104 67737154 -17701326 + L2 LINE L2 3183 3232 -40 2149 102 0 20 chr17 67737533 67737838 -17700642 - AluSc SINE Alu -10 299 1 240 299 52 10 chr17 67738008 67738105 -17700375 + MLT1J1 LTR MaLR 346 446 0 476 241 90 21 chr17 67738707 67738852 -17699628 - MLT1J LTR MaLR -257 254 100 629 301 62 46 chr17 67739377 67739467 -17699013 + L3 LINE CR1 240 327 -1250 2092 99 0 7 chr17 67739467 67739759 -17698721 + AluSg1 SINE Alu 1 290 -19 629 301 62 46 chr17 67739759 67739993 -17698487 + L3 LINE CR1 327 569 -1008 508 208 95 176 chr17 67740000 67740370 -17698110 - MER102b DNA MER1_type -1 340 1 1914 274 129 36 chr17 67740370 67741213 -17697267 + L3 LINE CR1 582 1503 -74 1451 174 68 0 chr17 67741382 67741704 -17696776 + AluJb SINE Alu 1 340 0 452 333 14 0 chr17 67741997 67742135 -17696345 - MIR3 SINE MIR -32 176 37 1523 186 10 17 chr17 67743106 67743402 -17695078 + AluJo SINE Alu 1 294 -18 309 198 0 0 chr17 67743424 67743510 -17694970 + GA-rich Low_complexity Low_complexity 3 88 0 2182 220 63 34 chr17 67744120 67744647 -17693833 + MLT1F LTR MaLR 1 542 0 221 83 28 0 chr17 67744665 67744701 -17693779 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1896 107 4 0 chr17 67745035 67745298 -17693182 - AluSq SINE Alu -12 301 38 369 281 84 24 chr17 67745388 67745555 -17692925 + L1ME4a LINE L1 5789 5965 -156 271 249 87 43 chr17 67745623 67745808 -17692672 + L1ME4a LINE L1 5928 6120 -1 2928 137 29 14 chr17 67746572 67747062 -17691418 - L1MB3 LINE L1 -2 6181 5685 2036 219 106 2 chr17 67747333 67747786 -17690694 + MLT1D LTR MaLR 6 505 0 338 281 115 29 chr17 67747786 67747925 -17690555 - MIR SINE MIR -25 237 87 1909 144 80 42 chr17 67748360 67748721 -17689759 - THE1C LTR MaLR 0 375 1 2994 141 46 0 chr17 67749650 67750131 -17688349 + Tigger3(Golem) DNA MER2_type 2524 3026 -3 1519 266 52 28 chr17 67750449 67750874 -17687606 - MLT1J LTR MaLR -6 505 71 370 320 32 16 chr17 67751167 67751292 -17687188 + L2 LINE L2 3182 3308 -5 1128 163 62 33 chr17 67751435 67751675 -17686805 + L1ME1 LINE L1 4713 4959 -1187 1831 196 34 43 chr17 67751769 67752406 -17686074 + L1ME1 LINE L1 4942 5579 -587 726 72 0 0 chr17 67752407 67752504 -17685976 + (TTCC)n Simple_repeat Simple_repeat 2 98 0 1624 178 26 23 chr17 67752522 67752831 -17685649 - AluJo SINE Alu -2 310 1 417 302 23 8 chr17 67752833 67752962 -17685518 + L1ME1 LINE L1 5581 5711 -455 32 26 0 0 chr17 67752964 67753003 -17685477 + AT_rich Low_complexity Low_complexity 1 39 0 1176 253 57 59 chr17 67753022 67753481 -17684999 + L1ME1 LINE L1 5700 6157 -9 231 88 0 0 chr17 67753568 67753602 -17684878 + (TA)n Simple_repeat Simple_repeat 2 35 0 2161 147 0 3 chr17 67753683 67753996 -17684484 + AluSx SINE Alu 1 312 0 710 289 142 15 chr17 67753999 67754394 -17684086 + L1M4 LINE L1 3840 4284 -1862 527 277 5 60 chr17 67754982 67755166 -17683314 - MIR SINE MIR -85 177 4 399 291 121 0 chr17 67755279 67755420 -17683060 + MIR SINE MIR 29 186 -76 300 267 133 0 chr17 67755427 67755517 -17682963 - L2 LINE L2 0 3313 3212 1904 184 97 2 chr17 67755522 67755886 -17682594 + L1MC3 LINE L1 6669 7076 -709 6338 118 7 5 chr17 67755886 67757577 -17680903 + L1PA15 LINE L1 4469 6148 -17 1904 184 97 2 chr17 67757577 67757614 -17680866 + L1MC3 LINE L1 7076 7108 -677 2072 174 21 19 chr17 67757614 67758014 -17680466 - MLT1B LTR MaLR -3 406 4 3068 174 21 56 chr17 67758016 67758518 -17679962 + L1MC3 LINE L1 7149 7624 -161 2324 107 7 0 chr17 67758518 67758826 -17679654 - AluSx SINE Alu -2 310 1 3068 174 21 56 chr17 67758826 67758983 -17679497 + L1MC3 LINE L1 7624 7785 0 221 167 45 76 chr17 67758984 67759050 -17679430 - L2 LINE L2 -94 3219 3156 1583 79 0 70 chr17 67759337 67759446 -17679034 + L1PA8 LINE L1 5959 6045 -127 2472 70 3 0 chr17 67759446 67759744 -17678736 + AluSp SINE Alu 1 299 -14 1583 79 0 70 chr17 67759744 67759863 -17678617 + L1PA8 LINE L1 6045 6171 -1 715 71 0 0 chr17 67759983 67760067 -17678413 - AluSp SINE Alu -202 111 28 1483 116 4 13 chr17 67760097 67760322 -17678158 + Tigger3(Golem) DNA MER2_type 2575 2797 -232 328 277 59 0 chr17 67760361 67760462 -17678018 - MIR SINE MIR -82 180 74 2304 101 0 0 chr17 67760462 67760769 -17677711 + AluSx SINE Alu 3 309 -3 234 174 0 0 chr17 67761581 67761627 -17676853 + A-rich Low_complexity Low_complexity 1 46 0 322 221 130 46 chr17 67762078 67762209 -17676271 + MIR SINE MIR 9 146 -62 243 309 91 91 chr17 67762240 67762590 -17675890 - L2 LINE L2 -20 3252 2903 771 207 0 28 chr17 67762644 67762823 -17675657 - MER96B DNA MER1_type? 0 417 244 2168 115 3 0 chr17 67763476 67763772 -17674708 + AluSp SINE Alu 1 297 -16 333 267 71 83 chr17 67765229 67765325 -17673155 + L1MEd LINE L1 688 784 -5421 249 83 0 0 chr17 67765325 67765361 -17673119 + (CAT)n Simple_repeat Simple_repeat 3 38 0 333 267 71 83 chr17 67765361 67765759 -17672721 + L1MEd LINE L1 784 1176 -5029 2236 119 3 0 chr17 67765765 67766068 -17672412 + AluSp SINE Alu 1 304 -9 302 292 53 12 chr17 67766075 67766246 -17672234 + L1MEd LINE L1 1640 1817 -4579 6748 270 46 41 chr17 67766310 67766588 -17671892 + L1MEd LINE L1 2059 2334 -3905 2158 112 3 0 chr17 67766588 67766875 -17671605 - AluSx SINE Alu -24 288 1 6748 270 46 41 chr17 67766875 67770590 -17667890 + L1MEd LINE L1 2334 6031 -208 270 278 0 44 chr17 67770746 67770836 -17667644 + L1ME3A LINE L1 6133 6218 -21 1640 164 32 4 chr17 67771183 67771463 -17667017 - AluJo SINE Alu -24 288 1 935 142 0 15 chr17 67771519 67771653 -17666827 + FLAM_C SINE Alu 2 133 0 192 77 0 0 chr17 67771691 67771717 -17666763 + (TAGA)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr17 67771786 67771810 -17666670 + AT_rich Low_complexity Low_complexity 1 24 0 541 65 39 0 chr17 67772903 67772980 -17665500 + MADE1 DNA Mariner 1 80 0 232 268 162 24 chr17 67773276 67773400 -17665080 + L1ME4a LINE L1 5685 5790 -331 1813 166 0 10 chr17 67773400 67773696 -17664784 + AluSx SINE Alu 1 293 -19 232 268 162 24 chr17 67773696 67773769 -17664711 + L1ME4a LINE L1 5790 5905 -216 372 125 0 0 chr17 67773823 67773879 -17664601 - MLT2B1 LTR ERVL 0 520 465 1244 169 4 31 chr17 67773889 67773982 -17664498 - MLT2C1 LTR ERVL -143 254 160 2897 106 31 19 chr17 67773982 67774405 -17664075 - MSTA LTR MaLR 0 428 1 1244 169 4 31 chr17 67774405 67774536 -17663944 - MLT2C1 LTR ERVL -237 160 36 1798 170 27 45 chr17 67774536 67774912 -17663568 - MER74A LTR ERVL 0 558 190 1316 138 234 43 chr17 67774917 67775221 -17663259 - THE1B LTR MaLR -2 362 1 858 197 56 6 chr17 67775222 67775400 -17663080 - MER74A LTR ERVL -368 190 4 345 206 106 57 chr17 67775425 67775566 -17662914 + L1ME4a LINE L1 5963 6110 -11 437 333 0 22 chr17 67775887 67776070 -17662410 + (TG)n Simple_repeat Simple_repeat 2 180 0 427 202 54 47 chr17 67776337 67776466 -17662014 + MER20B DNA MER1_type 7 136 -647 405 236 155 31 chr17 67777415 67777576 -17660904 + MER5A DNA MER1_type 9 189 0 2022 141 0 0 chr17 67777744 67778068 -17660412 - AluSx SINE Alu 0 324 1 289 250 45 34 chr17 67778278 67778366 -17660114 + MIR SINE MIR 30 118 -90 1814 176 14 0 chr17 67778819 67779115 -17659365 - AluJb SINE Alu -12 300 1 2745 163 39 21 chr17 67779163 67779677 -17658803 - L1MC2 LINE L1 -16 6328 5806 210 71 0 0 chr17 67781229 67781257 -17657223 + (TAAAA)n Simple_repeat Simple_repeat 4 31 0 247 224 0 17 chr17 67781963 67782021 -17656459 + MIR SINE MIR 86 142 -66 306 14 58 43 chr17 67782973 67783042 -17655438 + (CAAAAA)n Simple_repeat Simple_repeat 3 72 0 649 256 97 47 chr17 67783063 67783403 -17655077 + L1ME4a LINE L1 5595 5951 -219 496 157 21 21 chr17 67783448 67783588 -17654892 + GA-rich Low_complexity Low_complexity 2 141 0 210 304 133 32 chr17 67784244 67784402 -17654078 + L2 LINE L2 3016 3189 -124 204 97 0 0 chr17 67784493 67784524 -17653956 + (T)n Simple_repeat Simple_repeat 1 31 0 455 143 0 0 chr17 67784524 67784587 -17653893 - AluY SINE Alu -130 181 119 200 35 35 0 chr17 67784594 67784623 -17653857 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1279 101 0 53 chr17 67784623 67784751 -17653729 - L1MA3 LINE L1 -3 6302 6188 2200 111 19 3 chr17 67784751 67785058 -17653422 - AluSx SINE Alu 0 312 1 1279 101 0 53 chr17 67785058 67785136 -17653344 - L1MA3 LINE L1 -117 6188 6107 324 47 0 0 chr17 67785163 67785206 -17653274 - L1PA15 LINE L1 -9 6156 6114 2327 115 0 0 chr17 67785436 67785748 -17652732 - AluSx SINE Alu 0 312 1 224 233 0 17 chr17 67785821 67785881 -17652599 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 385 281 94 8 chr17 67787312 67787440 -17651040 - MIR3 SINE MIR -10 198 60 2536 61 0 3 chr17 67788173 67788485 -17649995 - AluY SINE Alu 0 311 1 283 221 118 63 chr17 67789024 67789151 -17649329 + L1ME4a LINE L1 5974 6107 -14 2462 197 22 43 chr17 67789664 67789904 -17648576 + L1MB7 LINE L1 5599 5843 -341 1005 218 73 65 chr17 67789904 67790244 -17648236 - MER2 DNA MER2_type 0 344 2 2462 197 22 43 chr17 67790244 67790602 -17647878 + L1MB7 LINE L1 5843 6184 0 295 232 101 0 chr17 67791356 67791425 -17647055 - MIR SINE MIR -23 239 164 191 372 47 0 chr17 67791432 67791518 -17646962 + MIR SINE MIR 117 206 -56 223 246 164 0 chr17 67791631 67791692 -17646788 - MIR SINE MIR -111 151 81 395 308 32 1 chr17 67791746 67791908 -17646572 + MER5B DNA MER1_type 1 176 -13 740 246 0 37 chr17 67792028 67792215 -17646265 - MIR SINE MIR -9 253 74 2092 120 3 13 chr17 67792232 67792531 -17645949 - AluSx SINE Alu -16 296 1 916 245 151 53 chr17 67792814 67793230 -17645250 + MLT1C LTR MaLR 6 462 -5 279 0 0 0 chr17 67793259 67793290 -17645190 + (TA)n Simple_repeat Simple_repeat 2 32 0 2157 109 3 7 chr17 67793291 67793585 -17644895 - AluSx SINE Alu -16 296 4 767 270 101 93 chr17 67793606 67794188 -17644292 + MLT1K LTR MaLR 2 588 0 798 217 92 39 chr17 67795712 67795919 -17642561 + MER20 DNA MER1_type 2 219 0 2130 97 61 50 chr17 67795958 67796318 -17642162 + THE1B LTR MaLR 1 364 0 507 230 89 87 chr17 67796583 67797007 -17641473 - MLT1J2 LTR MaLR -2 428 35 1013 234 99 3 chr17 67797607 67797919 -17640561 - Charlie4a DNA MER1_type -3 505 164 324 259 0 0 chr17 67798010 67798095 -17640385 - Charlie4a DNA MER1_type -361 147 63 355 162 50 141 chr17 67798127 67798226 -17640254 - Charlie4a DNA MER1_type -418 90 1 525 244 0 16 chr17 67798877 67799000 -17639480 + MIR3 SINE MIR 46 166 -42 821 170 21 85 chr17 67799050 67799238 -17639242 - MER5B DNA MER1_type -2 176 1 320 221 26 0 chr17 67799452 67799529 -17638951 + MIR SINE MIR 67 145 -63 305 264 240 0 chr17 67799549 67799678 -17638802 - MIR SINE MIR -6 256 97 289 162 122 14 chr17 67799736 67799810 -17638670 + MER53 DNA DNA 3 84 -105 559 292 124 41 chr17 67799878 67800740 -17637740 - L1M4 LINE L1 -827 5319 4386 459 214 23 0 chr17 67800768 67800899 -17637581 + CT-rich Low_complexity Low_complexity 1 134 0 1533 167 102 0 chr17 67800899 67801163 -17637317 - AluJo SINE Alu -20 292 2 662 150 22 33 chr17 67802168 67802348 -17636132 + CT-rich Low_complexity Low_complexity 2 179 0 2065 129 13 7 chr17 67802348 67802725 -17635755 - AluSx SINE Alu 0 379 1 252 0 0 0 chr17 67805279 67805307 -17633173 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 594 300 7 13 chr17 67805328 67805478 -17633002 + MER91A DNA MER1_type 1 149 -47 343 303 114 29 chr17 67805730 67805905 -17632575 - MER117 DNA MER1_type -3 194 5 314 175 12 50 chr17 67805929 67806009 -17632471 - MLT1F LTR MaLR -13 529 453 1874 153 17 0 chr17 67806361 67806648 -17631832 + AluJo SINE Alu 1 292 -20 1704 188 0 3 chr17 67807614 67807901 -17630579 + AluJb SINE Alu 1 286 -26 279 0 0 0 chr17 67807910 67807941 -17630539 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 523 265 211 0 chr17 67808179 67808364 -17630116 - MIR SINE MIR -35 227 4 2277 97 7 3 chr17 67808407 67808705 -17629775 + AluSq SINE Alu 1 299 -14 2414 99 0 0 chr17 67809888 67810191 -17628289 - AluSx SINE Alu -9 303 1 696 237 148 40 chr17 67810959 67811237 -17627243 + MLT1J LTR MaLR 2 309 -202 904 182 96 25 chr17 67811286 67811484 -17626996 + MLT1A1 LTR MaLR 1 212 -153 3150 118 25 0 chr17 67811790 67812264 -17626216 + L1PA10 LINE L1 5682 6167 -1 262 329 38 0 chr17 67812415 67812494 -17625986 - MIR SINE MIR -75 187 106 187 298 0 21 chr17 67813992 67814039 -17624441 + MER5C DNA MER1_type 8 53 -271 2092 125 24 3 chr17 67814346 67814635 -17623845 - AluSx SINE Alu -17 295 1 2228 118 7 0 chr17 67815269 67815573 -17622907 - AluSx SINE Alu -6 306 1 216 0 0 0 chr17 67815728 67815752 -17622728 + (A)n Simple_repeat Simple_repeat 1 24 0 314 236 9 18 chr17 67816242 67816468 -17622012 + CT-rich Low_complexity Low_complexity 1 224 0 443 190 15 33 chr17 67816497 67816740 -17621740 + CT-rich Low_complexity Low_complexity 1 238 0 212 158 18 0 chr17 67817683 67817740 -17620740 + (TA)n Simple_repeat Simple_repeat 2 59 0 1806 161 17 3 chr17 67819801 67820093 -17618387 - AluJb SINE Alu -16 296 1 186 288 15 30 chr17 67820260 67820326 -17618154 + MIR SINE MIR 30 94 -114 612 256 68 14 chr17 67820378 67820585 -17617895 - MIR SINE MIR 0 262 45 2314 114 0 0 chr17 67820707 67821015 -17617465 + AluSx SINE Alu 1 308 -4 216 0 0 0 chr17 67821015 67821039 -17617441 + (TA)n Simple_repeat Simple_repeat 2 25 0 1887 137 0 37 chr17 67821116 67821415 -17617065 + AluSx SINE Alu 1 288 -24 314 291 15 30 chr17 67821514 67821648 -17616832 - L1ME3A LINE L1 0 6170 6039 1199 204 50 32 chr17 67821798 67821826 -17616654 + MER58B DNA MER1_type 57 83 -2337 2025 152 0 3 chr17 67821826 67822122 -17616358 + AluJb SINE Alu 5 299 -13 1199 204 50 32 chr17 67822122 67822372 -17616108 + MER58B DNA MER1_type 83 340 -1 1175 271 20 38 chr17 67823809 67824260 -17614220 + MER113 DNA MER1_type? 76 518 -3 3327 124 85 9 chr17 67824265 67824819 -17613661 - Tigger1 DNA MER2_type 0 2418 1823 6247 139 29 16 chr17 67824821 67826080 -17612400 + L1MA5 LINE L1 4801 6042 -258 2066 158 9 23 chr17 67826080 67826422 -17612058 - MER1B DNA MER1_type 0 337 1 6247 139 29 16 chr17 67826422 67826489 -17611991 + L1MA5 LINE L1 6042 6107 -193 2119 141 0 3 chr17 67826489 67826802 -17611678 - AluSx SINE Alu 0 312 1 6247 139 29 16 chr17 67826802 67826969 -17611511 + L1MA5 LINE L1 6107 6300 0 11533 108 23 7 chr17 67826970 67828626 -17609854 - Tigger1 DNA MER2_type -631 1787 106 2209 113 7 3 chr17 67828627 67829013 -17609467 + AluSx SINE Alu 1 387 0 513 188 10 10 chr17 67829014 67829110 -17609370 - Tigger1 DNA MER2_type -2301 117 22 219 279 199 20 chr17 67829115 67829316 -17609164 + MIR SINE MIR 14 250 -12 304 238 133 19 chr17 67829317 67829387 -17609093 - L2 LINE L2 0 3272 3185 2359 43 43 0 chr17 67829387 67829669 -17608811 + AluY SINE Alu 12 305 -6 304 238 133 19 chr17 67829669 67829703 -17608777 - L2 LINE L2 -87 3185 3156 269 200 0 0 chr17 67830154 67830199 -17608281 + MER69 DNA AcHobo 23 67 -2459 725 23 0 0 chr17 67830335 67830423 -17608057 - L1PA4 LINE L1 -3 6152 6065 255 179 0 179 chr17 67830425 67830520 -17607960 + MER69 DNA AcHobo 2448 2525 -1 2479 53 0 0 chr17 67830971 67831287 -17607193 - AluY SINE Alu 0 316 1 239 79 26 0 chr17 67831396 67831434 -17607046 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 2143 147 0 3 chr17 67831436 67831748 -17606732 - AluSx SINE Alu -1 311 1 515 264 25 19 chr17 67831943 67832102 -17606378 - MLT1K LTR MaLR 0 588 429 888 276 30 24 chr17 67832152 67832449 -17606031 - LTR16C LTR ERVL 0 491 193 1043 267 30 18 chr17 67832830 67833163 -17605317 - MER102b DNA MER1_type -4 337 1 490 191 0 27 chr17 67833173 67833283 -17605197 - MIR SINE MIR -58 150 44 1124 220 0 9 chr17 67833355 67833573 -17604907 + MER58A DNA MER1_type 9 224 0 586 83 0 24 chr17 67833868 67833952 -17604528 - AluSp/q SINE Alu -56 257 176 2314 93 0 0 chr17 67835224 67835514 -17602966 + AluSg SINE Alu 1 290 -20 545 45 0 0 chr17 67836159 67836225 -17602255 - MADE1 DNA Mariner -14 66 1 525 255 130 9 chr17 67836295 67836526 -17601954 + MIR SINE MIR 1 259 -3 233 241 126 11 chr17 67836614 67836701 -17601779 - L1ME2 LINE L1 -5 6159 6063 1497 183 62 0 chr17 67836706 67837045 -17601435 - L1ME2 LINE L1 -166 5996 5637 1993 113 60 0 chr17 67837081 67837363 -17601117 - AluSx SINE Alu -13 299 1 1797 155 15 107 chr17 67837364 67837707 -17600773 + MLT1B LTR MaLR 33 337 -53 2416 91 0 0 chr17 67837707 67838004 -17600476 + AluSg SINE Alu 1 297 -13 1797 155 15 107 chr17 67838004 67838054 -17600426 + MLT1B LTR MaLR 337 390 0 263 221 0 139 chr17 67838054 67838140 -17600340 - L1ME2 LINE L1 -520 5650 5577 236 271 0 0 chr17 67838196 67838266 -17600214 + (TA)n Simple_repeat Simple_repeat 1 70 0 345 244 49 16 chr17 67838366 67838489 -17599991 + L1ME4a LINE L1 5988 6114 -7 368 271 35 14 chr17 67838515 67838659 -17599821 + L1ME4a LINE L1 5964 6110 -11 540 215 25 37 chr17 67838748 67838911 -17599569 - MER104 DNA Tc2 -2 178 18 202 280 103 19 chr17 67839341 67839448 -17599032 - MIR SINE MIR -70 192 77 3090 199 11 16 chr17 67839540 67840167 -17598313 - MER63 DNA MER1_type -4 1056 433 2208 143 19 38 chr17 67840598 67840968 -17597512 + THE1B LTR MaLR 2 364 0 2116 155 33 28 chr17 67841084 67841446 -17597034 + THE1B LTR MaLR 1 364 0 572 326 11 0 chr17 67841818 67841999 -17596481 - L3 LINE CR1 -148 1429 1247 271 270 180 0 chr17 67842020 67842131 -17596349 - MIR SINE MIR -12 250 120 936 266 120 8 chr17 67842131 67842390 -17596090 + MER115 DNA AcHobo 406 693 0 1696 152 0 4 chr17 68042880 68043143 -17395337 + AluJb SINE Alu 38 299 -13 1584 55 0 30 chr17 68043716 68043918 -17394562 + MER107 DNA MER1_type 2 197 0 363 250 12 0 chr17 68043985 68044069 -17394411 - L2 LINE L2 0 3272 3188 1552 225 48 101 chr17 68044165 68044680 -17393800 + MLT2B1 LTR ERVL 1 487 -33 393 22 0 0 chr17 68044680 68044726 -17393754 + (CA)n Simple_repeat Simple_repeat 2 47 0 1552 225 48 101 chr17 68044726 68044757 -17393723 + MLT2B1 LTR ERVL 487 518 -2 312 292 58 11 chr17 68046496 68046645 -17391835 + MIR SINE MIR 9 161 -63 254 246 0 0 chr17 68047386 68047443 -17391037 - L2 LINE L2 -9 3304 3248 289 184 0 0 chr17 68047518 68047567 -17390913 - FAM SINE Alu -2 173 125 2143 129 0 0 chr17 68047581 68047876 -17390604 - AluSx SINE Alu -17 295 1 437 219 133 0 chr17 68047911 68048016 -17390464 + FLAM_A SINE Alu 2 120 -13 207 111 0 28 chr17 68048020 68048056 -17390424 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 506 290 36 24 chr17 68048135 68048383 -17390097 + MARNA DNA Mariner 183 433 -153 2259 97 3 13 chr17 68049277 68049575 -17388905 - AluSq SINE Alu -10 303 9 239 293 27 13 chr17 68049749 68049824 -17388656 - MIR3 SINE MIR -24 184 109 2307 81 3 17 chr17 68050932 68051229 -17387251 + AluY SINE Alu 2 294 -17 2354 102 0 7 chr17 68051355 68051659 -17386821 + AluSx SINE Alu 1 302 -10 23 0 0 0 chr17 68052932 68052955 -17385525 + AT_rich Low_complexity Low_complexity 1 23 0 189 265 48 60 chr17 68053324 68053407 -17385073 + MIR3 SINE MIR 118 199 -9 1059 209 11 69 chr17 68053682 68053959 -17384521 - MLT1A1 LTR MaLR -97 268 8 362 245 100 90 chr17 68054551 68054841 -17383639 + L2 LINE L2 2027 2319 -995 355 188 25 38 chr17 68054841 68054921 -17383559 + MLT1A1 LTR MaLR 8 86 -279 187 302 0 0 chr17 68055017 68055080 -17383400 + L2 LINE L2 2912 2974 -298 238 250 0 0 chr17 68055098 68055142 -17383338 + (CACG)n Simple_repeat Simple_repeat 4 47 0 244 274 60 43 chr17 68055254 68055371 -17383109 + L2 LINE L2 3175 3293 -20 189 368 48 16 chr17 68055776 68055901 -17382579 + MIR3 SINE MIR 69 197 -11 2296 92 7 0 chr17 68056380 68056674 -17381806 - AluSp SINE Alu -17 296 1 2109 118 4 0 chr17 68056947 68057226 -17381254 + AluSx SINE Alu 1 280 -32 219 88 0 0 chr17 68057228 68057262 -17381218 + (GGGGA)n Simple_repeat Simple_repeat 5 38 0 2010 109 0 56 chr17 68058021 68058364 -17380116 + AluSq SINE Alu 1 326 0 1914 151 3 3 chr17 68058772 68059064 -17379416 - AluJb SINE Alu -14 298 7 957 207 161 84 chr17 68059263 68059630 -17378850 + MSTD LTR MaLR 1 395 -1 241 248 26 98 chr17 68060110 68060263 -17378217 - MIR SINE MIR -9 253 112 327 192 0 0 chr17 68060559 68060632 -17377848 + (CA)n Simple_repeat Simple_repeat 2 74 0 2168 121 0 16 chr17 68063009 68063315 -17375165 + AluSx SINE Alu 1 301 -11 1723 96 0 9 chr17 68063315 68063544 -17374936 + AluSq SINE Alu 72 298 -15 629 131 10 0 chr17 68063545 68063644 -17374836 + L1MB4 LINE L1 6053 6152 -28 2236 136 0 0 chr17 68063809 68064117 -17374363 + AluSx SINE Alu 1 308 -4 235 93 0 56 chr17 68064134 68064188 -17374292 + (GAAA)n Simple_repeat Simple_repeat 1 51 0 396 0 0 0 chr17 68064493 68064537 -17373943 + (TA)n Simple_repeat Simple_repeat 2 45 0 353 252 146 0 chr17 68065304 68065427 -17373053 - L2 LINE L2 -762 2552 2412 5118 159 93 2 chr17 68065852 68066926 -17371554 + L1MA4 LINE L1 5061 6235 -65 390 136 0 0 chr17 68066926 68066985 -17371495 - L1MA4 LINE L1 -14 6286 6228 439 35 0 0 chr17 68067022 68067080 -17371400 + L1MA4 LINE L1 6236 6293 -7 388 285 51 29 chr17 68068685 68068822 -17369658 - L2 LINE L2 0 3272 3133 385 239 31 59 chr17 68069041 68069263 -17369217 + L1MC5 LINE L1 7729 7944 -17 2278 154 53 72 chr17 68069575 68069590 -17368890 + MLT1C LTR MaLR 3 17 -450 2035 138 52 35 chr17 68069590 68069959 -17368521 + THE1C LTR MaLR 1 375 0 2278 154 53 72 chr17 68069959 68070130 -17368350 + MLT1C LTR MaLR 17 190 -277 1920 111 25 7 chr17 68070130 68070438 -17368042 + AluY SINE Alu 1 313 0 2278 154 53 72 chr17 68070438 68070723 -17367757 + MLT1C LTR MaLR 190 467 0 2372 104 7 0 chr17 68071761 68072069 -17366411 - AluSg SINE Alu 0 310 1 183 306 12 24 chr17 68072334 68072419 -17366061 - L2 LINE L2 -1261 2053 1970 229 291 0 0 chr17 68072561 68072616 -17365864 - L2 LINE L2 -10 3262 3208 6108 90 41 0 chr17 68073876 68074980 -17363500 - L1PA13 LINE L1 0 6163 5026 267 221 69 23 chr17 68075098 68075229 -17363251 + L1ME4a LINE L1 5967 6103 -18 2250 125 3 0 chr17 68075336 68075648 -17362832 + AluSp SINE Alu 1 313 0 821 132 158 121 chr17 68075651 68075924 -17362556 + MER4C LTR ERV1 181 463 -2 836 159 74 6 chr17 68076011 68076174 -17362306 + L1MB8 LINE L1 5998 6171 -7 2382 94 0 0 chr17 68076175 68076472 -17362008 - AluSx SINE Alu -15 297 1 420 250 72 40 chr17 68076488 68076640 -17361840 - LTR37B LTR ERV1 -311 157 1 219 323 93 19 chr17 68076853 68077014 -17361466 + MIR SINE MIR 77 249 -13 2114 130 0 16 chr17 68077690 68078006 -17360474 + AluSx SINE Alu 1 311 -1 493 302 149 41 chr17 68078303 68078942 -17359538 + L3 LINE CR1 671 1378 -199 222 277 59 10 chr17 68079831 68079932 -17358548 - MIR SINE MIR -124 138 33 2235 77 3 21 chr17 68079933 68080220 -17358260 - AluSp SINE Alu -14 299 18 203 263 18 0 chr17 68080762 68080819 -17357661 + GA-rich Low_complexity Low_complexity 1 58 0 1439 184 83 11 chr17 68081649 68081926 -17356554 + AluJo SINE Alu 1 297 -15 21 0 0 0 chr17 68082226 68082247 -17356233 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 68082856 68082891 -17355589 + AT_rich Low_complexity Low_complexity 1 35 0 2123 65 6 101 chr17 68083362 68083699 -17354781 + AluSq SINE Alu 1 305 -8 180 0 0 0 chr17 68084509 68084529 -17353951 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 212 167 0 0 chr17 68085978 68086020 -17352460 + T-rich Low_complexity Low_complexity 1 42 0 1933 154 14 0 chr17 68086032 68086325 -17352155 + AluJo SINE Alu 1 297 -15 236 133 22 0 chr17 68086458 68086503 -17351977 - MIR3 SINE MIR -45 163 118 1717 164 3 39 chr17 68088190 68088502 -17349978 + AluJo SINE Alu 1 301 -11 5994 164 33 11 chr17 68088884 68090178 -17348302 + L1MC1 LINE L1 5016 6333 0 2389 96 0 13 chr17 68090195 68090507 -17347973 + AluSg SINE Alu 1 308 -2 435 137 0 0 chr17 68090923 68090996 -17347484 + (TG)n Simple_repeat Simple_repeat 2 74 0 2095 150 0 0 chr17 68092656 68092962 -17345518 - AluJo SINE Alu -2 310 5 240 35 0 0 chr17 68094044 68094073 -17344407 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 1434 187 0 29 chr17 68094522 68094795 -17343685 - AluJb SINE Alu -43 269 5 445 264 0 4 chr17 68094847 68094999 -17343481 + MIR SINE MIR 51 256 -6 2065 137 0 3 chr17 68095109 68095422 -17343058 + AluSx SINE Alu 1 312 0 2731 82 27 5 chr17 68096008 68096375 -17342105 - THE1C LTR MaLR 0 375 1 236 258 147 55 chr17 68096375 68096538 -17341942 - MIR SINE MIR -4 258 81 1790 229 59 14 chr17 68097583 68098023 -17340457 - MLT1C LTR MaLR -2 465 6 1977 121 87 38 chr17 68099067 68099414 -17339066 + THE1B LTR MaLR 1 364 0 2219 104 3 3 chr17 68100272 68100581 -17337899 + AluSx SINE Alu 1 309 -3 1268 63 0 0 chr17 68100997 68101183 -17337297 - AluY SINE Alu 0 310 125 387 0 0 0 chr17 68102503 68102546 -17335934 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 184 321 0 0 chr17 68103753 68103809 -17334671 - MIR SINE MIR -154 108 53 202 26 79 26 chr17 68103998 68104036 -17334444 + A-rich Low_complexity Low_complexity 1 40 0 1573 167 7 14 chr17 68104570 68104887 -17333593 - AluJo SINE Alu 0 315 1 21 0 0 0 chr17 68104890 68104911 -17333569 + AT_rich Low_complexity Low_complexity 1 21 0 240 100 0 0 chr17 68107611 68107651 -17330829 + (TG)n Simple_repeat Simple_repeat 2 41 0 1883 130 0 43 chr17 68107771 68108095 -17330385 + AluJb SINE Alu 1 310 -2 296 27 0 0 chr17 68108738 68108775 -17329705 + tRNA-Cys-TGC tRNA tRNA 1 37 -38 201 100 50 0 chr17 68108919 68108959 -17329521 + (TG)n Simple_repeat Simple_repeat 2 43 0 412 248 43 0 chr17 68109464 68109581 -17328899 - MER104 DNA Tc2 -53 127 6 213 238 48 36 chr17 68109788 68109872 -17328608 - MIR SINE MIR -68 194 110 196 327 75 19 chr17 68110697 68110804 -17327676 + MIR SINE MIR 33 145 -117 360 309 45 0 chr17 68111125 68111235 -17327245 - L2 LINE L2 -50 3222 3108 399 313 45 56 chr17 68111239 68111507 -17326973 - L2 LINE L2 -428 2886 2622 1745 139 24 3 chr17 68111536 68111823 -17326657 + AluSx SINE Alu 4 296 -16 1507 186 0 36 chr17 68112532 68112701 -17325779 - AluJo SINE Alu -16 296 141 2104 104 10 3 chr17 68112701 68113009 -17325471 - AluSq SINE Alu -3 310 1 1507 186 0 36 chr17 68113009 68113146 -17325334 - AluJo SINE Alu -171 141 1 2177 114 0 3 chr17 68114410 68114716 -17323764 + AluSg SINE Alu 1 305 -5 320 257 7 88 chr17 68114716 68114845 -17323635 + MIR SINE MIR 140 259 -3 2421 114 19 24 chr17 68114925 68115302 -17323178 + THE1C LTR MaLR 1 375 0 195 306 103 69 chr17 68116828 68117322 -17321158 + L2 LINE L2 1744 2254 -1060 807 252 92 14 chr17 68117375 68117593 -17320887 - MIR SINE MIR 0 262 28 240 319 57 38 chr17 68117646 68117856 -17320624 + L2 LINE L2 2366 2579 -735 492 279 16 98 chr17 68118981 68119225 -17319255 - MIR SINE MIR -10 252 29 193 333 130 22 chr17 68119793 68119931 -17318549 + MIR3 SINE MIR 6 158 -50 1872 141 3 3 chr17 68120047 68120353 -17318127 + AluSx SINE Alu 1 306 -6 180 250 0 0 chr17 68120579 68120627 -17317853 + (CTGGGG)n Simple_repeat Simple_repeat 4 51 0 517 92 13 0 chr17 68120957 68121033 -17317447 - MADE1 DNA Mariner 0 80 4 196 323 125 0 chr17 68121254 68121350 -17317130 + MIR SINE MIR 36 143 -65 303 270 95 69 chr17 68124164 68124353 -17314127 + MIR3 SINE MIR 3 196 -12 426 285 76 14 chr17 68124688 68124832 -17313648 - L2 LINE L2 -3 3310 3158 2086 140 0 0 chr17 68125088 68125395 -17313085 + AluSx SINE Alu 1 307 -5 609 240 223 35 chr17 68126341 68126386 -17312094 - MLT1L LTR MaLR -18 597 562 875 201 67 67 chr17 68126386 68126560 -17311920 - MER58A DNA MER1_type -2196 224 48 1735 178 13 0 chr17 68126560 68126858 -17311622 + AluJb SINE Alu 1 302 -10 875 201 67 67 chr17 68126858 68126907 -17311573 - MER58A DNA MER1_type -2371 49 1 609 240 223 35 chr17 68126907 68127148 -17311332 - MLT1L LTR MaLR -53 562 257 1778 126 0 40 chr17 68128830 68129132 -17309348 + AluJb SINE Alu 1 290 -22 405 0 0 0 chr17 68129292 68129337 -17309143 + (TG)n Simple_repeat Simple_repeat 2 46 0 1731 137 25 0 chr17 68129337 68129614 -17308866 - AluSx SINE Alu -28 284 1 2207 102 0 0 chr17 68130783 68131077 -17307403 - AluSq SINE Alu -19 294 1 303 232 214 18 chr17 68131447 68131559 -17306921 - L2 LINE L2 -8 3305 3172 1954 180 25 14 chr17 68131655 68132021 -17306459 + MLT1B LTR MaLR 17 386 -4 1855 151 0 31 chr17 68132063 68132381 -17306099 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 68132449 68132470 -17306010 + AT_rich Low_complexity Low_complexity 1 21 0 1800 166 61 3 chr17 68133177 68133520 -17304960 - MER47A DNA MER2_type -3 363 1 2225 97 3 10 chr17 68133590 68133899 -17304581 + AluSc SINE Alu 1 307 -2 23 68 0 0 chr17 68134333 68134377 -17304103 + AT_rich Low_complexity Low_complexity 1 44 0 2185 80 3 29 chr17 68134840 68135153 -17303327 + AluY SINE Alu 1 305 -6 2050 105 3 10 chr17 68135163 68135458 -17303022 + AluSc SINE Alu 1 293 -16 26 64 0 0 chr17 68136647 68136694 -17301786 + AT_rich Low_complexity Low_complexity 1 47 0 1990 106 0 4 chr17 68136699 68136974 -17301506 + AluSx SINE Alu 1 274 -38 430 301 204 0 chr17 68137158 68137354 -17301126 + MIR SINE MIR 25 260 -2 254 245 0 0 chr17 68137829 68137882 -17300598 - L2 LINE L2 0 3272 3220 486 222 148 0 chr17 68138002 68138137 -17300343 - MIR SINE MIR 0 262 108 523 213 65 30 chr17 68138782 68138951 -17299529 - L1ME4a LINE L1 -5 6116 5942 2593 128 57 2 chr17 68139357 68139763 -17298717 - MSTA LTR MaLR 0 428 1 2020 128 3 0 chr17 68139870 68140167 -17298313 - AluSx SINE Alu -14 298 1 331 297 0 0 chr17 68140170 68140244 -17298236 + MER21B LTR ERV1 19 92 -771 2953 229 103 19 chr17 68140244 68141000 -17297480 + MER21B LTR ERV1 43 862 -1 254 212 221 53 chr17 68141011 68141124 -17297356 + MER21B LTR ERV1 731 862 -1 597 164 66 16 chr17 68141385 68141507 -17296973 - Charlie1a DNA MER1_type -847 608 481 26 21 0 42 chr17 68141513 68141542 -17296938 + AT_rich Low_complexity Low_complexity 1 29 -17 1490 178 56 0 chr17 68141542 68141811 -17296669 + AluJb SINE Alu 1 284 -28 26 21 0 42 chr17 68141811 68141829 -17296651 + AT_rich Low_complexity Low_complexity 29 46 0 392 274 25 38 chr17 68141831 68141988 -17296492 - Charlie1a DNA MER1_type -964 491 337 1116 247 65 19 chr17 68142074 68142382 -17296098 - Charlie1a DNA MER1_type -1133 322 1 1483 172 57 24 chr17 68142537 68142834 -17295646 + AluJo SINE Alu 1 307 -5 2310 92 0 0 chr17 68143023 68143324 -17295156 + AluSx SINE Alu 1 301 0 198 203 43 72 chr17 68143811 68143880 -17294600 + L2 LINE L2 3206 3272 0 2245 74 44 7 chr17 68143953 68144251 -17294229 - AluY SINE Alu -2 309 1 2213 79 72 10 chr17 68144837 68145127 -17293353 - AluSg SINE Alu -2 308 1 2369 138 63 0 chr17 68146319 68146716 -17291764 - MSTA LTR MaLR 0 428 7 216 0 0 0 chr17 68147289 68147313 -17291167 + (A)n Simple_repeat Simple_repeat 1 24 0 2506 75 10 0 chr17 68148849 68149156 -17289324 + AluSq SINE Alu 1 310 -3 319 295 78 21 chr17 68151211 68151404 -17287076 + MIR SINE MIR 56 259 -3 189 0 0 0 chr17 68151463 68151484 -17286996 + (A)n Simple_repeat Simple_repeat 1 21 0 366 322 123 32 chr17 68151893 68152325 -17286155 + L2 LINE L2 2190 2660 -654 1486 186 45 38 chr17 68153082 68153449 -17285031 + L1MB2 LINE L1 5448 6078 -93 2135 128 0 0 chr17 68153449 68153746 -17284734 + AluSx SINE Alu 3 299 -13 1486 186 45 38 chr17 68153746 68153807 -17284673 + L1MB2 LINE L1 6078 6137 -34 1995 187 24 19 chr17 68153807 68153839 -17284641 + L1MB2 LINE L1 5746 5776 -395 1401 136 36 0 chr17 68153839 68154060 -17284420 + MER46A DNA MER2_type 4 232 -4 1995 187 24 19 chr17 68154060 68154444 -17284036 + L1MB2 LINE L1 5776 6164 -7 1509 152 74 7 chr17 68154542 68154812 -17283668 + AluJb SINE Alu 25 312 0 329 322 55 49 chr17 68155684 68155914 -17282566 + MIR SINE MIR 18 249 -13 322 325 32 25 chr17 68156450 68156607 -17281873 + L1ME LINE L1 5448 5605 -516 2343 101 3 0 chr17 68156634 68156941 -17281539 + AluSx SINE Alu 1 308 -4 1179 127 0 0 chr17 68157110 68157276 -17281204 + AluSg/x SINE Alu 139 304 -6 1093 194 126 0 chr17 68158358 68158636 -17279844 + MER33 DNA MER1_type 1 313 -11 227 184 0 0 chr17 68158724 68158762 -17279718 - THE1C LTR MaLR 0 428 391 1938 108 29 50 chr17 68158934 68159276 -17279204 - THE1C LTR MaLR -40 335 1 2034 133 7 3 chr17 68159813 68160107 -17278373 - AluSx SINE Alu -17 295 1 261 83 0 0 chr17 68160232 68160268 -17278212 + (CA)n Simple_repeat Simple_repeat 1 36 0 2433 76 0 0 chr17 68161649 68161950 -17276530 - AluY SINE Alu -10 301 1 211 290 101 0 chr17 68162343 68162412 -17276068 - L2 LINE L2 -6 3307 3232 2261 104 7 0 chr17 68163659 68163957 -17274523 - AluSq SINE Alu -13 300 1 2186 124 3 3 chr17 68165304 68165602 -17272878 + AluSq SINE Alu 1 298 -15 277 312 51 51 chr17 68167125 68167282 -17271198 + L1MC4a LINE L1 5531 5687 -2121 589 284 69 15 chr17 68167291 68167495 -17270985 - MIR SINE MIR -6 256 42 528 211 61 70 chr17 68167496 68167709 -17270771 + L1MC4a LINE L1 5689 5899 -1909 2030 115 21 7 chr17 68167839 68168127 -17270353 + AluSx SINE Alu 1 292 -20 652 167 0 0 chr17 68168209 68168317 -17270163 - FLAM_C SINE Alu -33 110 3 25 51 0 0 chr17 68168320 68168359 -17270121 + AT_rich Low_complexity Low_complexity 1 39 0 2428 71 0 7 chr17 68168969 68169264 -17269216 + AluY SINE Alu 1 293 -18 1851 123 12 0 chr17 68169936 68170189 -17268291 - AluSx SINE Alu -17 295 40 232 234 52 39 chr17 68170545 68170622 -17267858 + L1P4 LINE L1 5514 5591 -575 1187 152 9 65 chr17 68170986 68171217 -17267263 - MER20 DNA MER1_type 0 219 2 26 0 0 0 chr17 68171272 68171298 -17267182 + AT_rich Low_complexity Low_complexity 1 26 0 2094 118 14 0 chr17 68171301 68171589 -17266891 + AluSx SINE Alu 1 292 -20 2111 138 0 6 chr17 68172657 68172968 -17265512 + AluJo SINE Alu 1 309 -3 341 279 55 24 chr17 68173400 68173565 -17264915 - MIR SINE MIR 0 262 93 637 206 74 34 chr17 68174013 68174188 -17264292 + L1MB7 LINE L1 4979 5160 -986 3664 172 119 21 chr17 68174326 68174983 -17263497 + L1MB7 LINE L1 5171 5949 -235 2068 131 3 7 chr17 68174983 68175281 -17263199 - AluSx SINE Alu -15 297 1 3664 172 119 21 chr17 68175281 68175541 -17262939 + L1MB7 LINE L1 5949 6182 -2 2120 104 32 0 chr17 68175578 68175858 -17262622 - AluSx SINE Alu -23 289 1 729 169 15 15 chr17 68175980 68176110 -17262370 + FLAM_C SINE Alu 1 130 -3 341 111 0 0 chr17 68176122 68176176 -17262304 + Alu SINE Alu 249 302 0 522 136 58 4 chr17 68176176 68176437 -17262043 + (TA)n Simple_repeat Simple_repeat 1 275 0 2115 124 3 0 chr17 68176574 68176884 -17261596 + AluSq SINE Alu 1 311 0 2262 88 0 36 chr17 68177267 68177573 -17260907 - AluSx SINE Alu -17 295 1 189 260 169 19 chr17 68177672 68177826 -17260654 - MER5A DNA MER1_type -6 183 7 2058 146 0 16 chr17 68178866 68179182 -17259298 + AluSx SINE Alu 1 311 -1 543 236 96 22 chr17 68180489 68180667 -17257813 + MIR SINE MIR 71 261 -1 2106 107 3 10 chr17 68180834 68181124 -17257356 - AluSx SINE Alu -24 288 1 214 202 298 0 chr17 68181664 68181748 -17256732 + MER5A DNA MER1_type 2 110 -79 754 233 56 37 chr17 68182216 68182431 -17256049 - MIR SINE MIR -29 233 15 343 249 101 101 chr17 68182977 68183103 -17255377 + MIR SINE MIR 23 151 -111 1789 125 8 0 chr17 68183103 68183359 -17255121 + AluJo SINE Alu 55 312 0 343 249 101 101 chr17 68183359 68183421 -17255059 + MIR SINE MIR 150 211 -51 1288 109 11 0 chr17 68183496 68183670 -17254810 + AluSg/x SINE Alu 128 303 -9 682 182 30 15 chr17 68183796 68183928 -17254552 - MER94 DNA DNA 0 134 1 270 268 55 61 chr17 68184880 68185044 -17253436 - MIR3 SINE MIR -10 198 36 2152 131 13 3 chr17 68185207 68185512 -17252968 + AluJb SINE Alu 1 308 -4 371 222 0 19 chr17 68185512 68185620 -17252860 + (CATATA)n Simple_repeat Simple_repeat 3 108 0 1918 141 28 3 chr17 68189579 68189870 -17248610 - 7SLRNA srpRNA srpRNA -22 298 1 2255 96 0 0 chr17 68189898 68190205 -17248275 + AluSg SINE Alu 1 307 0 218 282 0 28 chr17 68190218 68190289 -17248191 + L2 LINE L2 3190 3258 -14 2026 132 3 25 chr17 68190905 68191224 -17247256 + AluSx SINE Alu 1 312 0 2032 111 0 17 chr17 68191558 68191846 -17246634 + AluSq SINE Alu 1 283 -30 232 36 0 0 chr17 68191846 68191874 -17246606 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 260 132 53 0 chr17 68191954 68191992 -17246488 + L1MC/D LINE L1 5497 5536 -2272 2203 114 3 0 chr17 68192293 68192583 -17245897 + AluSx SINE Alu 6 296 -16 21 36 0 0 chr17 68195888 68195916 -17242564 + AT_rich Low_complexity Low_complexity 1 28 0 471 263 73 17 chr17 68196188 68196367 -17242113 - MIR SINE MIR -59 203 15 1539 155 10 56 chr17 68196839 68197142 -17241338 + AluJb SINE Alu 1 289 -23 2260 81 40 0 chr17 68197247 68197544 -17240936 - AluY SINE Alu -2 309 1 2186 112 0 0 chr17 68197704 68197991 -17240489 + AluSq SINE Alu 5 291 -22 575 264 56 53 chr17 68198001 68198304 -17240176 - L1ME4a LINE L1 -206 5915 5612 2285 94 0 0 chr17 68200176 68200463 -17238017 - AluSx SINE Alu -23 289 3 2454 77 3 13 chr17 68201037 68201350 -17237130 + AluSg SINE Alu 1 310 0 205 339 0 88 chr17 68202720 68202891 -17235589 - L2 LINE L2 0 3272 3117 1804 161 10 23 chr17 68203074 68203384 -17235096 + AluJb SINE Alu 1 306 -6 3448 196 204 34 chr17 68205370 68205657 -17232823 + Charlie1 DNA MER1_type 9 246 -2515 2195 117 3 0 chr17 68205657 68205957 -17232523 + AluSx SINE Alu 1 301 -11 3448 196 204 34 chr17 68205957 68206853 -17231627 + Charlie1 DNA MER1_type 246 2711 -50 2147 80 0 7 chr17 68206853 68207128 -17231352 - AluSx SINE Alu -15 297 25 606 216 35 17 chr17 68207425 68207541 -17230939 + FLAM_A SINE Alu 1 118 -15 23 0 0 0 chr17 68207541 68207564 -17230916 + AT_rich Low_complexity Low_complexity 1 23 0 2165 117 0 13 chr17 68207572 68207881 -17230599 + AluY SINE Alu 1 305 -6 275 254 32 0 chr17 68208030 68208093 -17230387 - L2 LINE L2 -4 3309 3245 1045 142 0 0 chr17 68209043 68209198 -17229282 + AluSg/x SINE Alu 141 295 -17 518 209 119 8 chr17 68209262 68209396 -17229084 + MIR SINE MIR 31 179 -83 180 0 0 0 chr17 68209442 68209462 -17229018 + (TTG)n Simple_repeat Simple_repeat 2 21 0 874 108 23 0 chr17 68209465 68209594 -17228886 - AluSq/x SINE Alu -180 133 2 270 247 12 59 chr17 68209885 68209970 -17228510 - Charlie4 DNA MER1_type 0 1961 1881 347 293 92 70 chr17 68210149 68210518 -17227962 + L2 LINE L2 2382 2758 -556 841 249 123 27 chr17 68210943 68211483 -17226997 - HAL1b LINE L1 -26 1322 835 396 0 0 0 chr17 68211483 68211527 -17226953 + (TTA)n Simple_repeat Simple_repeat 2 45 0 2255 107 0 0 chr17 68211529 68211827 -17226653 - AluSg SINE Alu -12 298 1 841 249 123 27 chr17 68211827 68211857 -17226623 - HAL1b LINE L1 -513 835 621 228 67 0 0 chr17 68213576 68213606 -17224874 + (A)n Simple_repeat Simple_repeat 1 30 0 1558 194 21 0 chr17 68216284 68216568 -17221912 + AluJb SINE Alu 2 291 -21 2342 66 0 7 chr17 68216878 68217165 -17221315 + AluSq SINE Alu 1 285 -28 441 0 0 0 chr17 68217165 68217214 -17221266 + (CA)n Simple_repeat Simple_repeat 2 50 0 317 329 14 29 chr17 68217674 68217814 -17220666 + L2 LINE L2 3172 3309 -4 610 267 126 62 chr17 68217870 68218290 -17220190 + L1ME4a LINE L1 5398 5844 -277 234 143 0 0 chr17 68218323 68218365 -17220115 - L1MB3 LINE L1 -25 6158 6117 274 100 0 100 chr17 68218365 68218425 -17220055 - AluSp/q SINE Alu -5 298 245 3992 169 49 35 chr17 68218427 68218547 -17219933 - L1MB3 LINE L1 -64 6119 6002 1685 157 3 23 chr17 68218547 68218846 -17219634 + AluJo SINE Alu 14 306 -6 3992 169 49 35 chr17 68218846 68219528 -17218952 - L1MB3 LINE L1 -181 6002 5306 2146 103 3 10 chr17 68219689 68220000 -17218480 - AluSx SINE Alu 0 312 1 2549 65 0 7 chr17 68220978 68221285 -17217195 + AluY SINE Alu 1 305 -6 2189 130 0 0 chr17 68221441 68221742 -17216738 + AluSx SINE Alu 1 301 -11 248 77 26 0 chr17 68221742 68221781 -17216699 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 422 252 15 52 chr17 68222421 68222556 -17215924 + MLT1I LTR MaLR 280 409 0 2211 113 0 3 chr17 68223562 68223864 -17214616 + AluSq SINE Alu 1 301 -12 795 311 117 64 chr17 68224304 68225153 -17213327 + L2 LINE L2 1988 2902 -411 2221 120 0 0 chr17 68225153 68225453 -17213027 - AluSx SINE Alu -12 300 1 795 311 117 64 chr17 68225453 68225595 -17212885 + L2 LINE L2 2902 3035 -278 1275 144 23 110 chr17 68225595 68225894 -17212586 + AluJo SINE Alu 1 273 -39 253 273 83 74 chr17 68226045 68226166 -17212314 + L2 LINE L2 3184 3305 -8 1321 171 12 113 chr17 68226420 68226581 -17211899 - AluJb SINE Alu -5 297 184 2420 70 13 3 chr17 68226581 68226880 -17211600 - AluY SINE Alu -9 302 1 1321 171 12 113 chr17 68226880 68227046 -17211434 - AluJb SINE Alu -118 184 3 184 244 24 73 chr17 68227851 68227933 -17210547 + MIR SINE MIR 177 254 -8 308 239 161 39 chr17 68229032 68229162 -17209318 + MER117 DNA MER1_type 2 147 -50 206 186 47 23 chr17 68229201 68229244 -17209236 - MIR3 SINE MIR -52 156 113 22 35 0 0 chr17 68229311 68229340 -17209140 + AT_rich Low_complexity Low_complexity 1 29 0 2056 116 0 37 chr17 68229346 68229640 -17208840 - AluSx SINE Alu -20 292 10 2007 115 10 14 chr17 68230019 68230307 -17208173 - AluSx SINE Alu -21 291 5 647 222 51 51 chr17 68230659 68230875 -17207605 + L1MC5 LINE L1 7311 7526 -435 281 277 174 38 chr17 68230975 68231159 -17207321 + L1ME3A LINE L1 5962 6170 0 1491 171 13 50 chr17 68231198 68231497 -17206983 + AluJo SINE Alu 1 288 -24 358 247 200 13 chr17 68231517 68231667 -17206813 + MER3 DNA MER1_type 32 209 0 * 741 192 169 6 chr17 68231667 68231713 -17206767 - MER3 DNA MER1_type -134 75 2 1973 117 8 0 chr17 68232146 68232412 -17206068 + AluSx SINE Alu 22 289 -23 21 0 0 0 chr17 68233573 68233594 -17204886 + AT_rich Low_complexity Low_complexity 1 21 0 287 355 33 0 chr17 68233718 68233839 -17204641 + MIR3 SINE MIR 70 194 -14 2113 123 0 16 chr17 68233927 68234236 -17204244 + AluSx SINE Alu 4 307 -5 841 235 29 58 chr17 68234843 68235086 -17203394 - AluJb SINE Alu -32 280 45 2244 116 0 0 chr17 68235103 68235396 -17203084 - AluSx SINE Alu -19 293 1 1476 189 0 0 chr17 68236810 68237106 -17201374 - AluY SINE Alu -13 298 3 570 165 0 0 chr17 68237254 68237357 -17201123 + (CA)n Simple_repeat Simple_repeat 2 104 0 269 358 117 0 chr17 68239033 68239153 -17199327 - L2 LINE L2 -2 3270 3137 2107 133 0 7 chr17 68239198 68239500 -17198980 + AluSx SINE Alu 5 304 -8 2166 136 0 3 chr17 68239951 68240260 -17198220 + AluSx SINE Alu 1 308 -4 1921 167 0 3 chr17 68240587 68240899 -17197581 - AluJb SINE Alu -1 311 1 315 282 115 52 chr17 68243789 68244041 -17194439 + L1MC4a LINE L1 5340 5607 -2201 405 244 158 43 chr17 68244110 68244319 -17194161 + L1MC4a LINE L1 5709 5943 -178 2245 48 10 7 chr17 68248223 68248512 -17189968 - AluSx SINE Alu -22 290 1 287 231 7 41 chr17 68249430 68249577 -17188903 + (CGGGG)n Simple_repeat Simple_repeat 2 143 0 42 48 0 0 chr17 68249722 68249785 -17188695 + GC_rich Low_complexity Low_complexity 1 63 0 405 0 0 0 chr17 68249855 68249900 -17188580 + (CGG)n Simple_repeat Simple_repeat 2 46 0 386 288 13 20 chr17 68249960 68250113 -17188367 + CT-rich Low_complexity Low_complexity 3 154 0 593 323 65 11 chr17 68252648 68252834 -17185646 + MER91A DNA MER1_type 1 196 0 742 296 137 0 chr17 68252959 68253243 -17185237 + L2 LINE L2 2383 2705 -609 243 311 99 0 chr17 68253270 68253421 -17185059 + L1MC4a LINE L1 4494 4659 -1487 841 268 67 103 chr17 68253465 68254107 -17184373 + L1MC4a LINE L1 5296 5914 -1894 25 51 0 0 chr17 68254118 68254157 -17184323 + AT_rich Low_complexity Low_complexity 1 39 0 1606 181 7 13 chr17 68254160 68254459 -17184021 + AluJo SINE Alu 1 297 -15 2041 123 3 3 chr17 68254515 68254816 -17183664 + AluSx SINE Alu 2 302 -10 2402 73 0 0 chr17 68255019 68255322 -17183158 - AluY SINE Alu -8 303 1 207 100 0 0 chr17 68255335 68255365 -17183115 + (A)n Simple_repeat Simple_repeat 1 30 0 231 250 20 70 chr17 68255432 68255532 -17182948 - L1MC5 LINE L1 -106 7855 7761 * 560 193 97 21 chr17 68255522 68255667 -17182813 + L1MA10 LINE L1 6167 6322 -12 202 267 93 13 chr17 68255868 68255943 -17182537 - L2 LINE L2 -34 3238 3158 1873 94 8 4 chr17 68256016 68256281 -17182199 + AluY SINE Alu 39 304 -7 897 123 0 7 chr17 68256490 68256628 -17181852 + AluSq/x SINE Alu 1 137 -175 2396 70 0 0 chr17 68257124 68257423 -17181057 - AluSx SINE Alu -13 299 1 1827 136 11 4 chr17 68257450 68257760 -17180720 + AluSx SINE Alu 1 312 0 2068 91 3 7 chr17 68257814 68258099 -17180381 + AluSg1 SINE Alu 1 284 -25 236 194 60 15 chr17 68258167 68258234 -17180246 + MER34 LTR ERV1 425 494 -48 230 319 124 26 chr17 68258602 68258691 -17179789 - L2 LINE L2 -8 3264 3160 627 241 8 8 chr17 68258691 68258824 -17179656 - FLAM_A SINE Alu 0 133 1 230 319 124 26 chr17 68258824 68258847 -17179633 - L2 LINE L2 -112 3160 3141 * 385 295 203 0 chr17 68258825 68259032 -17179448 - L2 LINE L2 -1429 1885 1637 279 0 0 0 chr17 68259209 68259240 -17179240 + (TG)n Simple_repeat Simple_repeat 2 32 0 1255 97 0 0 chr17 68259265 68259430 -17179050 + AluSp SINE Alu 136 300 -13 242 252 114 23 chr17 68259430 68259561 -17178919 - LTR48 LTR ERV1 -140 647 505 304 242 0 0 chr17 68259738 68259804 -17178676 - MER34 LTR ERV1 -446 96 31 213 39 0 0 chr17 68259839 68259865 -17178615 + (A)n Simple_repeat Simple_repeat 1 26 0 2089 93 7 0 chr17 68259868 68260158 -17178322 + AluSq SINE Alu 1 292 -21 1877 163 0 0 chr17 68260482 68260783 -17177697 - AluSx SINE Alu -11 301 1 951 116 0 0 chr17 68260816 68260945 -17177535 - FLAM_C SINE Alu -4 129 1 297 0 0 0 chr17 68261313 68261346 -17177134 + (TG)n Simple_repeat Simple_repeat 2 34 0 1263 96 0 0 chr17 68261371 68261537 -17176943 + AluSp SINE Alu 136 301 -12 229 252 117 18 chr17 68261537 68261648 -17176832 - LTR48 LTR ERV1 -140 647 526 362 227 154 27 chr17 68261904 68262014 -17176466 - L2 LINE L2 0 3313 3190 288 0 0 0 chr17 68262115 68262147 -17176333 + (T)n Simple_repeat Simple_repeat 1 32 0 1466 118 5 0 chr17 68262147 68262351 -17176129 + AluSx SINE Alu 2 206 -106 1762 189 25 30 chr17 68262509 68262576 -17175904 - MLT1A1 LTR MaLR -2 363 297 2150 120 0 0 chr17 68262576 68262884 -17175596 + AluSg SINE Alu 1 308 -2 1762 189 25 30 chr17 68262884 68263181 -17175299 - MLT1A1 LTR MaLR -68 297 1 211 70 23 23 chr17 68263241 68263284 -17175196 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2074 95 25 0 chr17 68263286 68263571 -17174909 - AluSq SINE Alu -21 292 1 1988 141 0 0 chr17 68263573 68263871 -17174609 - AluSx SINE Alu -14 298 1 1410 171 47 53 chr17 68264237 68264401 -17174079 - AluJo SINE Alu -15 297 134 2075 115 3 0 chr17 68264401 68264697 -17173783 - AluSx SINE Alu -15 297 1 1410 171 47 53 chr17 68264697 68264831 -17173649 - AluJo SINE Alu -178 134 1 2284 75 3 0 chr17 68265803 68266097 -17172383 + AluSc SINE Alu 1 295 -14 2308 99 0 0 chr17 68266351 68266653 -17171827 - AluSq SINE Alu -11 302 1 390 21 0 0 chr17 68267106 68267153 -17171327 + (GA)n Simple_repeat Simple_repeat 2 48 0 1612 174 30 7 chr17 68267235 68267539 -17170941 - AluJb SINE Alu -1 311 1 2251 98 3 0 chr17 68267548 68267855 -17170625 - AluSp SINE Alu -5 308 1 1806 131 0 4 chr17 68268251 68268518 -17169962 + AluSq SINE Alu 1 266 -47 687 290 48 26 chr17 68268592 68268823 -17169657 + MIR SINE MIR 21 256 -6 1273 132 0 5 chr17 68268954 68269143 -17169337 + MER41E LTR ERV1 325 512 0 507 241 32 37 chr17 68269296 68269483 -17168997 + HERV9 LTR ERV1 1326 1511 -2774 2171 125 0 0 chr17 68269605 68269917 -17168563 + AluSx SINE Alu 1 312 0 852 280 14 105 chr17 68270423 68270517 -17167963 + HERV9 LTR ERV1 2013 2114 -4814 1769 186 0 0 chr17 68270517 68270829 -17167651 + AluJo SINE Alu 1 312 0 852 280 14 105 chr17 68270829 68271389 -17167091 + HERV9 LTR ERV1 2114 2969 -3959 257 174 22 0 chr17 68271482 68271528 -17166952 + HERV9 LTR ERV1 2724 2770 -4986 2086 74 32 3 chr17 68271530 68271815 -17166665 + AluSg SINE Alu 1 293 -17 1777 132 9 66 chr17 68271867 68272186 -17166294 - AluJb SINE Alu -10 302 2 2424 48 3 10 chr17 68272576 68272886 -17165594 - AluY SINE Alu -3 308 1 337 306 26 52 chr17 68272914 68273143 -17165337 + HERV9 LTR ERV1 3494 3716 -5203 2018 100 43 0 chr17 68273155 68273436 -17165044 - AluSx SINE Alu -19 293 1 629 277 13 50 chr17 68273441 68273679 -17164801 + HERV9 LTR ERV1 3410 3638 -4761 1792 149 3 3 chr17 68273684 68273973 -17164507 + AluSc SINE Alu 1 289 -20 930 131 131 0 chr17 68274232 68274400 -17164080 + MER41E LTR ERV1 211 400 -112 1633 150 3 35 chr17 68274415 68274701 -17163779 - AluJo SINE Alu -35 277 1 208 355 90 37 chr17 68274976 68274994 -17163486 + L2 LINE L2 1739 1755 -1559 2318 97 0 0 chr17 68274994 68275305 -17163175 - AluY SINE Alu 0 311 1 208 355 90 37 chr17 68275305 68275475 -17163005 + L2 LINE L2 1755 1937 -1377 272 235 185 8 chr17 68275544 68275663 -17162817 + MLT1J LTR MaLR 8 147 -364 275 248 31 93 chr17 68276568 68276697 -17161783 + MIR SINE MIR 84 204 -58 1803 130 3 43 chr17 68276701 68277044 -17161436 - AluSx SINE Alu 0 331 1 1708 158 31 0 chr17 68277046 68277337 -17161143 - AluJb SINE Alu -10 302 3 851 195 0 24 chr17 68277337 68277501 -17160979 + AluJo SINE Alu 66 225 -87 2405 67 0 0 chr17 68277547 68277845 -17160635 + AluY SINE Alu 1 298 -13 1293 174 34 62 chr17 68277972 68278293 -17160187 - AluJo SINE Alu 0 312 1 1540 210 0 0 chr17 68278301 68278611 -17159869 - AluJo SINE Alu -2 310 1 261 83 0 0 chr17 68279024 68279060 -17159420 + (A)n Simple_repeat Simple_repeat 1 36 0 210 298 64 21 chr17 68279409 68279503 -17158977 + MIR SINE MIR 21 118 -144 2159 115 0 6 chr17 68279783 68280097 -17158383 - AluSx SINE Alu 0 312 1 483 293 39 35 chr17 68280106 68280338 -17158142 - LTR16C LTR ERVL 0 491 259 2792 155 15 34 chr17 68280356 68280561 -17157919 + L1MB8 LINE L1 5625 5832 -346 1794 131 17 24 chr17 68280561 68280859 -17157621 - AluSx SINE Alu -5 307 12 2792 155 15 34 chr17 68280859 68281190 -17157290 + L1MB8 LINE L1 5832 6151 -27 203 0 37 0 chr17 68281196 68281223 -17157257 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1992 131 31 9 chr17 68281509 68281829 -17156651 + L1MB3 LINE L1 5610 5936 -247 1227 159 9 31 chr17 68282001 68282228 -17156252 + L1MB3 LINE L1 5919 6140 -43 6813 63 14 28 chr17 68282237 68283294 -17155186 - SVA Other Other -683 1386 432 478 248 16 8 chr17 68283428 68283557 -17154923 + LTR67 LTR ERVL 428 557 0 613 124 11 0 chr17 68284401 68284490 -17153990 - 5S rRNA rRNA -31 90 1 2040 106 17 3 chr17 68284818 68285119 -17153361 - AluSx SINE Alu -7 305 1 377 51 34 0 chr17 68285123 68285182 -17153298 + (TTTG)n Simple_repeat Simple_repeat 4 64 0 867 168 0 0 chr17 68285206 68285355 -17153125 - L1PA16 LINE L1 0 6166 6018 1859 202 105 33 chr17 68285464 68285886 -17152594 + MLT2B1 LTR ERVL 1 464 -56 378 63 127 114 chr17 68285886 68285911 -17152569 - MADE1 DNA Mariner 0 80 57 1893 135 24 10 chr17 68285911 68286208 -17152272 + AluSx SINE Alu 1 301 -11 378 63 127 114 chr17 68286208 68286261 -17152219 - MADE1 DNA Mariner -23 57 1 1859 202 105 33 chr17 68286261 68286323 -17152157 + MLT2B1 LTR ERVL 464 520 0 299 351 69 46 chr17 68286488 68286662 -17151818 + MER5B DNA MER1_type 1 178 0 290 244 132 39 chr17 68286989 68287114 -17151366 - MIR SINE MIR -63 145 63 1677 165 46 23 chr17 68287114 68287208 -17151272 - L1MB4 LINE L1 0 6180 6090 2269 126 8 35 chr17 68287208 68287582 -17150898 - THE1B LTR MaLR 0 364 1 1677 165 46 23 chr17 68287582 68287832 -17150648 - L1MB4 LINE L1 -90 6090 5828 290 244 132 39 chr17 68287832 68287900 -17150580 - MIR SINE MIR -145 63 3 * 632 309 25 21 chr17 68287900 68288139 -17150341 + L3 LINE CR1 1251 1490 -87 1966 121 0 24 chr17 68288200 68288654 -17149826 - AluSx SINE Alu 0 312 1 2238 97 0 3 chr17 68288697 68289006 -17149474 + AluSc SINE Alu 1 308 -1 268 191 58 196 chr17 68289655 68289690 -17148790 - MER5A DNA MER1_type -29 160 122 1881 155 7 0 chr17 68289690 68289999 -17148481 + AluSx SINE Alu 1 311 -1 268 191 58 196 chr17 68289999 68290050 -17148430 - MER5A DNA MER1_type -67 122 107 2176 111 0 0 chr17 68290050 68290348 -17148132 - AluY SINE Alu -13 298 1 268 191 58 196 chr17 68290348 68290433 -17148047 - MER5A DNA MER1_type -82 107 12 851 263 44 0 chr17 68290450 68290655 -17147825 + MIR SINE MIR 28 241 -21 2139 113 0 0 chr17 68290681 68290982 -17147498 + AluSx SINE Alu 1 301 -11 1581 208 3 3 chr17 68290992 68291290 -17147190 + AluJo SINE Alu 1 298 -14 270 0 0 0 chr17 68291864 68291894 -17146586 + (T)n Simple_repeat Simple_repeat 1 30 0 2087 127 0 7 chr17 68292371 68292671 -17145809 + AluSx SINE Alu 1 298 -14 1219 172 54 118 chr17 68292705 68293045 -17145435 - MLT1A1 LTR MaLR 0 365 5 2116 106 31 7 chr17 68293045 68293338 -17145142 - AluSx SINE Alu -12 300 1 2211 117 0 0 chr17 68293344 68293643 -17144837 - AluSx SINE Alu -13 299 1 1219 172 54 118 chr17 68293643 68293685 -17144795 - MLT1A1 LTR MaLR -321 44 1 274 242 31 94 chr17 68294397 68294442 -17144038 + MIR SINE MIR 108 154 -108 1768 151 18 7 chr17 68294442 68294752 -17143728 + AluSx SINE Alu 1 313 0 274 242 31 94 chr17 68294752 68294833 -17143647 + MIR SINE MIR 154 227 -35 598 162 13 218 chr17 68294919 68294985 -17143495 - MER5A DNA MER1_type 0 189 111 2380 74 0 0 chr17 68294985 68295270 -17143210 + AluSc SINE Alu 1 285 -24 598 162 13 218 chr17 68295270 68295299 -17143181 - MER5A DNA MER1_type -78 111 78 423 0 0 0 chr17 68295299 68295346 -17143134 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 598 162 13 218 chr17 68295346 68295483 -17142997 - MER5A DNA MER1_type -111 78 4 428 308 28 7 chr17 68295491 68295634 -17142846 + MIR SINE MIR 35 180 -82 2175 131 0 10 chr17 68295675 68295987 -17142493 - AluSx SINE Alu -3 309 1 828 268 20 37 chr17 68297137 68297428 -17141052 + L1MC4a LINE L1 5574 5861 -1947 351 0 0 0 chr17 68297428 68297467 -17141013 + (CA)n Simple_repeat Simple_repeat 2 40 0 2129 118 0 0 chr17 68297489 68297798 -17140682 - AluSx SINE Alu 0 310 2 1868 158 10 7 chr17 68297851 68298149 -17140331 + AluSx SINE Alu 5 303 -9 2618 107 124 79 chr17 68298221 68298488 -17139992 + MER4B LTR ERV1 5 259 -351 2223 119 0 3 chr17 68298488 68298791 -17139689 - AluSx SINE Alu -10 302 1 2618 107 124 79 chr17 68298791 68299102 -17139378 + MER4B LTR ERV1 259 609 -1 2532 50 3 3 chr17 68299125 68299422 -17139058 + AluY SINE Alu 1 297 -14 2211 129 0 6 chr17 68299522 68299833 -17138647 - AluSq SINE Alu -4 309 1 2078 129 0 0 chr17 68299981 68300261 -17138219 - AluSq SINE Alu -33 280 1 1197 208 10 35 chr17 68300386 68300666 -17137814 - MER101 LTR ERV1 -4 558 224 2156 114 7 7 chr17 68300819 68301116 -17137364 - AluSx SINE Alu -15 297 1 2050 168 151 62 chr17 68301427 68301718 -17136762 - MER34C LTR ERV1 0 585 321 2248 107 0 10 chr17 68301718 68302028 -17136452 - AluSx SINE Alu -5 307 1 2050 168 151 62 chr17 68302028 68302273 -17136207 - MER34C LTR ERV1 -264 321 1 1037 112 5 9 chr17 68302407 68302613 -17135867 + AluSx SINE Alu 2 293 -17 2331 95 13 0 chr17 68302621 68302927 -17135553 + AluSg SINE Alu 1 310 0 2220 106 0 34 chr17 68303071 68303391 -17135089 - AluSg SINE Alu -1 309 1 1062 186 14 42 chr17 68303391 68303606 -17134874 - AluJo SINE Alu -18 294 86 294 221 105 12 chr17 68303718 68303804 -17134676 - L2 LINE L2 -2 3311 3218 799 206 26 0 chr17 68303821 68303976 -17134504 - LTR32 LTR ERVL 0 471 313 1081 102 0 38 chr17 68303977 68304134 -17134346 - AluJb SINE Alu -161 151 1 345 243 54 34 chr17 68304134 68304282 -17134198 + L2 LINE L2 3105 3255 -58 296 241 44 80 chr17 68304370 68304427 -17134053 - L2 LINE L2 -494 2820 2762 2442 85 0 10 chr17 68304427 68304733 -17133747 - AluY SINE Alu -8 303 1 296 241 44 80 chr17 68304733 68304812 -17133668 - L2 LINE L2 -552 2762 2689 478 314 199 40 chr17 68304849 68304918 -17133562 - L3 LINE CR1 -132 1445 1388 2072 135 3 16 chr17 68304918 68305229 -17133251 + AluJb SINE Alu 1 307 -5 478 314 199 40 chr17 68305229 68305810 -17132670 - L3 LINE CR1 -189 1388 667 2307 105 0 0 chr17 68305810 68306106 -17132374 - AluSg1 SINE Alu -13 296 1 478 314 199 40 chr17 68306106 68306176 -17132304 - L3 LINE CR1 -910 667 609 1994 144 10 3 chr17 68306181 68306472 -17132008 - AluSx SINE Alu -19 293 1 2315 114 0 0 chr17 68306491 68306798 -17131682 - AluSx SINE Alu -5 307 1 1770 135 35 22 chr17 68307119 68307460 -17131020 - MER4A LTR ERV1 0 664 261 462 156 89 0 chr17 68307460 68307550 -17130930 - MER4A LTR ERV1 -566 98 1 1540 193 39 0 chr17 68307650 68307772 -17130708 + AluJb SINE Alu 1 117 -195 192 40 0 0 chr17 68307772 68307797 -17130683 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1540 193 39 0 chr17 68307797 68307954 -17130526 + AluJb SINE Alu 117 291 -21 2407 90 0 3 chr17 68307987 68308287 -17130193 + AluSg SINE Alu 1 299 -11 473 373 29 42 chr17 68308456 68308842 -17129638 - L3 LINE CR1 -1006 571 191 241 232 210 7 chr17 68308883 68309021 -17129459 - L1ME4a LINE L1 0 6121 5956 2259 92 3 7 chr17 68309041 68309334 -17129146 + AluSc SINE Alu 1 292 -17 363 123 0 15 chr17 68309334 68309392 -17129088 - L1PA10 LINE L1 -8 6160 6102 1854 160 3 7 chr17 68309427 68309720 -17128760 - AluJb SINE Alu -20 292 1 222 118 0 0 chr17 68309969 68310003 -17128477 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 1858 153 122 10 chr17 68310013 68310398 -17128082 - MSTA LTR MaLR 0 428 1 556 208 25 0 chr17 68310488 68310608 -17127872 + L1ME4a LINE L1 5541 5663 -458 1867 140 7 27 chr17 68310630 68310930 -17127550 + AluSx SINE Alu 1 294 -18 470 104 0 0 chr17 68310946 68311013 -17127467 + MER41A LTR ERV1 400 466 -88 333 270 101 42 chr17 68311021 68311258 -17127222 + L1ME4a LINE L1 5691 5941 -180 2167 121 0 13 chr17 68311547 68311854 -17126626 - AluSx SINE Alu -9 303 1 2119 139 0 0 chr17 68312161 68312462 -17126018 - AluSx SINE Alu -11 301 1 303 276 121 39 chr17 68312989 68313221 -17125259 - L1ME4a LINE L1 -173 5948 5698 425 249 62 52 chr17 68313231 68313272 -17125208 - MIR SINE MIR -62 200 161 2106 124 0 3 chr17 68313272 68313582 -17124898 - AluSc SINE Alu 0 309 1 425 249 62 52 chr17 68313582 68313732 -17124748 - MIR SINE MIR -101 161 6 1101 118 0 7 chr17 68314350 68314502 -17123978 + AluSq/x SINE Alu 1 151 -161 584 155 10 0 chr17 68314502 68314599 -17123881 + MER41-int LTR ERV1 1592 1689 -4257 2088 122 11 0 chr17 68314600 68314923 -17123557 + AluSx SINE Alu 1 326 0 25 0 0 0 chr17 68315275 68315300 -17123180 + AT_rich Low_complexity Low_complexity 1 25 0 1270 154 0 40 chr17 68315306 68315533 -17122947 + AluJo SINE Alu 3 220 -92 463 157 13 11 chr17 68315533 68315683 -17122797 + AluJb SINE Alu 86 306 -6 2635 43 3 0 chr17 68315925 68316228 -17122252 + AluY SINE Alu 1 304 -7 320 62 62 0 chr17 68316906 68316970 -17121510 + (TA)n Simple_repeat Simple_repeat 1 68 0 2229 101 3 3 chr17 68316970 68317257 -17121223 - AluSq SINE Alu -26 287 1 2446 37 41 14 chr17 68317710 68318005 -17120475 - AluY SINE Alu -8 303 1 1069 146 0 0 chr17 68318041 68318192 -17120288 + AluSq/x SINE Alu 1 151 -162 489 175 32 8 chr17 68318621 68318747 -17119733 + CT-rich Low_complexity Low_complexity 3 131 0 326 191 11 79 chr17 68318761 68318850 -17119630 - L1MC4 LINE L1 -6 8036 7954 4104 216 43 49 chr17 68318923 68319577 -17118903 - L1MC4 LINE L1 -442 7600 6944 2413 91 13 0 chr17 68319577 68319885 -17118595 - AluSx SINE Alu 0 312 1 4104 216 43 49 chr17 68319885 68320061 -17118419 - L1MC4 LINE L1 -1098 6944 6768 1691 169 17 14 chr17 68320061 68320356 -17118124 - AluSx SINE Alu -16 296 1 4104 216 43 49 chr17 68320356 68320672 -17117808 - L1MC4 LINE L1 -1274 6768 6460 872 182 6 0 chr17 68320787 68320963 -17117517 + GA-rich Low_complexity Low_complexity 2 178 0 386 241 69 35 chr17 68320980 68321125 -17117355 - L1ME2 LINE L1 -2 6162 6013 1516 183 12 16 chr17 68321599 68321993 -17116487 - MER89 LTR ERV1 -2 557 10 1156 103 0 0 chr17 68322996 68323141 -17115339 + AluSq/x SINE Alu 1 145 -167 1834 101 0 0 chr17 68323144 68323381 -17115099 + AluSq SINE Alu 45 281 -32 2501 60 3 0 chr17 68323415 68323713 -17114767 - AluY SINE Alu -12 299 1 417 283 0 0 chr17 68323797 68323917 -17114563 + MIR SINE MIR 95 214 -48 2204 115 20 3 chr17 68325049 68325354 -17113126 + AluSx SINE Alu 1 310 -2 363 288 96 36 chr17 68325440 68325595 -17112885 - L1ME2 LINE L1 -219 5902 5758 1954 106 60 0 chr17 68325595 68325877 -17112603 - AluSx SINE Alu -13 299 1 363 288 96 36 chr17 68325877 68326002 -17112478 - L1ME2 LINE L1 -363 5758 5605 1875 55 0 0 chr17 68326342 68326560 -17111920 - AluY SINE Alu -16 295 78 2154 107 31 0 chr17 68327145 68327436 -17111044 - AluSg SINE Alu 0 310 11 1170 117 0 0 chr17 68327451 68327630 -17110850 + (TTTCC)n Simple_repeat Simple_repeat 2 180 0 1523 163 55 39 chr17 68327630 68328039 -17110441 - AluJb SINE Alu 0 414 1 420 243 87 0 chr17 68328549 68328652 -17109828 - MER81 DNA DNA -1 113 2 226 365 67 0 chr17 68328953 68329057 -17109423 - L2 LINE L2 0 3313 3203 2359 96 3 0 chr17 68329362 68329665 -17108815 + AluSp SINE Alu 1 304 -9 1541 200 17 7 chr17 68329838 68330128 -17108352 - AluJo SINE Alu -19 293 1 458 248 149 31 chr17 68330193 68330354 -17108126 - MER5A DNA MER1_type -1 188 9 918 128 17 6 chr17 68330801 68330973 -17107507 + CT-rich Low_complexity Low_complexity 4 177 0 2151 134 7 0 chr17 68330994 68331321 -17107159 - AluSx SINE Alu 0 330 2 365 185 0 0 chr17 68331775 68331840 -17106640 - L2 LINE L2 -4 3309 3245 188 282 26 13 chr17 68331888 68331966 -17106514 - L2 LINE L2 -197 3075 2997 1797 161 38 0 chr17 68332305 68332596 -17105884 - AluSx SINE Alu -10 302 1 204 294 35 12 chr17 68332723 68332808 -17105672 - MIR SINE MIR -19 243 157 1811 242 72 76 chr17 68332824 68333219 -17105261 - L1MC4 LINE L1 -70 7972 7577 1972 139 0 0 chr17 68333219 68333492 -17104988 - AluSx SINE Alu -26 286 14 1811 242 72 76 chr17 68333492 68333659 -17104821 - L1MC4 LINE L1 -465 7577 7411 2068 89 4 0 chr17 68333659 68333917 -17104563 + AluSg SINE Alu 34 292 -18 1811 242 72 76 chr17 68333917 68334274 -17104206 - L1MC4 LINE L1 -631 7411 7054 1813 169 21 0 chr17 68334274 68334564 -17103916 - AluSg SINE Alu -14 296 1 1811 242 72 76 chr17 68334564 68334591 -17103889 - L1MC4 LINE L1 -988 7054 7028 243 286 36 0 chr17 68334591 68334647 -17103833 - MIR SINE MIR -191 71 14 2047 86 0 4 chr17 68335734 68335990 -17102490 - AluSx SINE Alu -15 297 43 627 191 0 0 chr17 68336049 68336154 -17102326 - AluSc SINE Alu -13 296 192 416 152 98 54 chr17 68336665 68336777 -17101703 - LTR16A1 LTR ERVL -2 455 339 803 198 0 6 chr17 68336779 68336936 -17101544 - MER5A DNA MER1_type -4 185 30 929 244 47 69 chr17 68336936 68337255 -17101225 - LTR16A1 LTR ERVL -127 330 19 2218 100 7 0 chr17 68337874 68338174 -17100306 + AluSq SINE Alu 1 302 -11 1724 194 10 0 chr17 68338283 68338576 -17099904 - AluJb SINE Alu -16 296 1 2336 105 20 0 chr17 68339554 68339860 -17098620 + AluSx SINE Alu 1 312 0 2151 114 0 0 chr17 68340356 68340638 -17097842 + AluSx SINE Alu 1 282 -30 295 95 0 0 chr17 68340638 68340680 -17097800 + (CAAA)n Simple_repeat Simple_repeat 3 152 0 273 298 8 18 chr17 68340805 68340892 -17097588 + MER5A DNA MER1_type 91 189 0 2288 280 73 15 chr17 68340974 68341709 -17096771 + L2 LINE L2 1003 1780 -1534 2142 116 3 3 chr17 68341964 68342267 -17096213 + AluSq SINE Alu 1 303 -10 548 29 14 0 chr17 68342321 68342391 -17096089 + (TG)n Simple_repeat Simple_repeat 2 72 0 21 36 0 0 chr17 68342717 68342745 -17095735 + AT_rich Low_complexity Low_complexity 1 28 0 3109 135 36 3 chr17 68342745 68343329 -17095151 + L1 LINE L1 4262 4864 -1282 573 212 15 30 chr17 68343336 68343468 -17095012 - MLT1E LTR MaLR -151 442 313 1876 318 96 29 chr17 68343906 68345274 -17093206 - ERVL LTR ERVL -682 5082 3623 285 336 9 0 chr17 68345362 68345478 -17093002 - ERVL LTR ERVL -2255 3509 3393 2483 206 64 45 chr17 68345550 68345619 -17092861 - L1MC4 LINE L1 -414 7628 7562 1546 146 92 15 chr17 68345619 68345880 -17092600 - AluSx SINE Alu -27 285 5 2483 206 64 45 chr17 68345880 68346528 -17091952 - L1MC4 LINE L1 -480 7562 6897 2369 78 3 0 chr17 68346542 68346835 -17091645 - AluSp SINE Alu -19 294 1 11568 165 46 7 chr17 68346883 68349030 -17089450 - L1M1 LINE L1 -5315 2250 19 1219 104 0 0 chr17 68349032 68349195 -17089285 - AluSc SINE Alu -7 302 140 491 229 67 99 chr17 68349205 68349309 -17089171 - L1MC4 LINE L1 -1153 6889 6783 2312 81 3 39 chr17 68349309 68349618 -17088862 + AluY SINE Alu 1 298 -13 491 229 67 99 chr17 68349618 68349736 -17088744 - L1MC4 LINE L1 -1259 6783 6674 2614 40 0 0 chr17 68350366 68350665 -17087815 - AluY SINE Alu -12 299 1 207 189 0 0 chr17 68351125 68351162 -17087318 + A-rich Low_complexity Low_complexity 2 38 0 224 217 0 0 chr17 68351169 68351215 -17087265 + (TG)n Simple_repeat Simple_repeat 1 46 0 335 206 23 8 chr17 68351241 68351372 -17087108 + (TG)n Simple_repeat Simple_repeat 2 134 0 338 284 165 57 chr17 68351488 68351664 -17086816 - MIR SINE MIR -16 246 52 21 36 0 0 chr17 68352120 68352148 -17086332 + AT_rich Low_complexity Low_complexity 1 28 0 776 153 0 0 chr17 68352148 68352266 -17086214 - FLAM_C SINE Alu -25 118 1 391 297 178 16 chr17 68352633 68353071 -17085409 + L1ME4a LINE L1 5315 5823 -298 339 293 73 20 chr17 68353072 68353222 -17085258 + L1ME4a LINE L1 5960 6117 -4 1995 123 7 7 chr17 68353236 68353528 -17084952 - AluSp SINE Alu -5 308 17 218 374 0 17 chr17 68353552 68353667 -17084813 + CT-rich Low_complexity Low_complexity 6 118 0 2349 78 24 3 chr17 68354752 68355048 -17083432 + AluSp SINE Alu 1 302 -11 225 132 0 0 chr17 68355048 68355086 -17083394 + (TA)n Simple_repeat Simple_repeat 1 38 0 2296 94 0 3 chr17 68355606 68355903 -17082577 - AluSg SINE Alu -14 296 1 408 326 108 36 chr17 68356358 68356502 -17081978 - L2 LINE L2 0 3313 3181 2185 113 0 3 chr17 68356502 68356813 -17081667 + AluSx SINE Alu 1 310 0 408 326 108 36 chr17 68356813 68356946 -17081534 - L2 LINE L2 -132 3181 3015 216 0 0 0 chr17 68357183 68357207 -17081273 + (TA)n Simple_repeat Simple_repeat 2 25 0 2379 54 3 17 chr17 68357207 68357502 -17080978 - AluY SINE Alu -20 291 1 962 133 0 0 chr17 68357660 68357795 -17080685 + FRAM SINE Alu 32 166 -10 2288 108 3 0 chr17 68357964 68358260 -17080220 - AluSg SINE Alu -13 297 1 21 71 0 0 chr17 68358486 68358528 -17079952 + AT_rich Low_complexity Low_complexity 1 42 0 1231 145 113 0 chr17 68358790 68359038 -17079442 - L1MA8 LINE L1 -20 6271 5996 2218 91 20 0 chr17 68359057 68359353 -17079127 - AluY SINE Alu -9 302 1 310 317 158 47 chr17 68359857 68360198 -17078282 - L1M2 LINE L1 -5943 906 528 231 143 121 110 chr17 68361001 68361092 -17077388 + MIR SINE MIR 53 144 -64 509 116 21 63 chr17 68361609 68361704 -17076776 - AluSg/x SINE Alu -19 290 200 2077 90 72 10 chr17 68361892 68362182 -17076298 - AluSq SINE Alu -2 311 4 2039 149 0 3 chr17 68362195 68362484 -17075996 - AluJb SINE Alu -24 288 1 2187 103 3 10 chr17 68362714 68363014 -17075466 - AluSx SINE Alu -14 298 1 180 298 119 36 chr17 68363522 68363606 -17074874 - L2 LINE L2 -39 3233 3143 1006 324 105 37 chr17 68363768 68363906 -17074574 - L2 LINE L2 -350 2964 2837 431 18 18 0 chr17 68363906 68363962 -17074518 + (TG)n Simple_repeat Simple_repeat 1 57 0 1006 324 105 37 chr17 68363962 68364916 -17073564 - L2 LINE L2 -477 2837 1797 363 319 52 29 chr17 68364946 68365156 -17073324 - L2 LINE L2 -569 2745 2531 2092 98 39 23 chr17 68365644 68365950 -17072530 + AluY SINE Alu 1 311 0 198 0 0 0 chr17 68366186 68366208 -17072272 + (GA)n Simple_repeat Simple_repeat 1 22 0 202 359 51 8 chr17 68366212 68366329 -17072151 - L2 LINE L2 -2879 435 314 2225 100 0 7 chr17 68366712 68367002 -17071478 + AluSg SINE Alu 1 288 -22 3014 207 91 13 chr17 68367009 68367958 -17070522 - L1ME1 LINE L1 -17 6149 5021 1729 175 3 36 chr17 68367958 68368266 -17070214 - AluJb SINE Alu -14 298 1 3014 207 91 13 chr17 68368266 68368914 -17069566 - L1ME1 LINE L1 -1145 5021 4425 1853 176 3 12 chr17 68369821 68370162 -17068318 - MER44D DNA MER2_type -1 608 1 2243 88 0 33 chr17 68370578 68370884 -17067596 + AluY SINE Alu 1 296 -15 24 77 0 0 chr17 68371265 68371317 -17067163 + AT_rich Low_complexity Low_complexity 1 52 0 9344 126 17 48 chr17 68371887 68374800 -17063680 + L1MA3 LINE L1 3493 6305 0 971 230 47 0 chr17 68374904 68375117 -17063363 + MER58A DNA MER1_type 1 223 -1 21 0 0 0 chr17 68375167 68375188 -17063292 + AT_rich Low_complexity Low_complexity 1 21 0 195 333 108 29 chr17 68376460 68376562 -17061918 - MIR SINE MIR -62 146 37 2455 78 7 0 chr17 68378005 68378314 -17060166 + AluY SINE Alu 1 311 0 525 279 96 36 chr17 68378791 68379175 -17059305 + Charlie8 DNA MER1_type 31 437 -1980 477 261 0 0 chr17 68379190 68379301 -17059179 + FLAM_A SINE Alu 16 126 -16 333 360 65 65 chr17 68379806 68380084 -17058396 + L2 LINE L2 2982 3259 -13 2269 127 7 0 chr17 68381443 68381750 -17056730 - AluSx SINE Alu -3 309 1 832 201 28 17 chr17 68381976 68382155 -17056325 + MLT1E LTR MaLR 20 200 -393 1172 234 16 0 chr17 68382190 68382446 -17056034 + MLT1E LTR MaLR 334 593 0 2339 101 0 7 chr17 68382649 68382957 -17055523 + AluSg SINE Alu 1 306 -4 736 238 30 10 chr17 68383168 68383370 -17055110 - MER74B LTR ERVL 0 622 417 305 333 0 0 chr17 68383672 68383762 -17054718 + L1MC4 LINE L1 6614 6703 -1339 * 309 322 0 0 chr17 68383746 68383836 -17054644 - L1MC4 LINE L1 -1339 6703 6614 24 85 0 0 chr17 68384185 68384244 -17054236 + AT_rich Low_complexity Low_complexity 1 59 0 297 327 128 33 chr17 68384320 68384531 -17053949 - MIR SINE MIR -12 250 20 494 309 22 0 chr17 68384672 68384808 -17053672 + MIR SINE MIR 35 173 -89 2392 72 0 19 chr17 68385310 68385617 -17052863 - AluSx SINE Alu -11 301 1 24 0 0 0 chr17 68386129 68386153 -17052327 + AT_rich Low_complexity Low_complexity 1 24 0 943 160 117 5 chr17 68386822 68387010 -17051470 + MER3 DNA MER1_type 1 209 0 279 0 0 0 chr17 68387298 68387311 -17051169 + (CA)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr17 68387311 68387342 -17051138 + (CA)n Simple_repeat Simple_repeat 2 32 0 2067 133 3 0 chr17 68387366 68387652 -17050828 - AluSg1 SINE Alu -22 287 1 2204 100 3 0 chr17 68387653 68387952 -17050528 - AluSx SINE Alu -12 300 1 25 51 0 0 chr17 68388419 68388458 -17050022 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr17 68388507 68388543 -17049937 + AT_rich Low_complexity Low_complexity 1 36 0 463 262 56 56 chr17 68389053 68389305 -17049175 - L1ME3A LINE L1 -105 6065 5814 1893 236 130 26 chr17 68389322 68390198 -17048282 - L1ME3 LINE L1 -6 6156 5190 508 159 23 0 chr17 68390203 68390291 -17048189 - MSTD LTR MaLR 0 432 343 32304 104 12 56 chr17 68390386 68393594 -17044886 - L1PA7 LINE L1 -2 6152 3385 2386 86 0 0 chr17 68393594 68393898 -17044582 - AluY SINE Alu -7 304 1 32304 104 12 56 chr17 68393898 68397124 -17041356 - L1PA7 LINE L1 -2769 3385 18 1202 220 124 14 chr17 68397125 68397416 -17041064 - MSTD LTR MaLR -73 323 1 1104 238 44 91 chr17 68397418 68397687 -17040793 - L1ME3 LINE L1 -961 5185 4905 2155 136 0 0 chr17 68397687 68397996 -17040484 - AluSx SINE Alu -3 309 1 1104 238 44 91 chr17 68397996 68398043 -17040437 - L1ME3 LINE L1 -1241 4905 4857 1996 118 3 49 chr17 68398043 68398347 -17040133 - AluSx SINE Alu -22 290 1 1104 238 44 91 chr17 68398347 68398709 -17039771 - L1ME3 LINE L1 -1289 4857 4538 2638 203 55 25 chr17 68398714 68399355 -17039125 - L1ME1 LINE L1 -177 5989 5330 484 319 71 21 chr17 68399706 68400044 -17038436 - MLT1E-int LTR MaLR -769 602 248 1542 299 30 35 chr17 68400261 68400832 -17037648 - MLT1E LTR MaLR -25 568 1 1901 231 39 18 chr17 68400904 68401580 -17036900 + L1ME1 LINE L1 2112 2758 -3457 262 216 80 0 chr17 68401606 68401694 -17036786 + L1ME1 LINE L1 2638 2732 -3483 1621 139 0 103 chr17 68401696 68402027 -17036453 + AluY SINE Alu 1 297 -14 2198 95 0 35 chr17 68402027 68402344 -17036136 + AluSc SINE Alu 1 306 -3 8000 199 51 21 chr17 68402351 68403862 -17034618 + L1MB2 LINE L1 3116 4581 -1659 2092 138 23 0 chr17 68403862 68404209 -17034271 + THE1A LTR MaLR 1 355 0 8000 199 51 21 chr17 68404209 68405727 -17032753 + L1MB2 LINE L1 4581 6233 -7 1629 260 115 21 chr17 68405749 68406411 -17032069 + L1ME1 LINE L1 3337 4060 -2155 3154 219 89 32 chr17 68406437 68407517 -17030963 + L1ME1 LINE L1 4750 5938 -297 2089 143 0 0 chr17 68407517 68407818 -17030662 - AluSx SINE Alu -11 301 1 3154 219 89 32 chr17 68407818 68408133 -17030347 + L1ME1 LINE L1 5938 6233 -2 4992 163 61 3 chr17 68409112 68410821 -17027659 + L1MB1 LINE L1 4372 6167 -1 488 311 70 47 chr17 68410951 68411250 -17027230 + L1MEc LINE L1 1021 1268 -4937 1936 104 18 32 chr17 68411282 68411560 -17026920 + AluSp SINE Alu 1 274 -39 6390 193 32 21 chr17 68411566 68412606 -17025874 - L1 LINE L1 -1758 4624 3560 1613 181 13 27 chr17 68412606 68412905 -17025575 - AluJo SINE Alu -15 297 3 6390 193 32 21 chr17 68412905 68413421 -17025059 - L1 LINE L1 -2822 3560 3051 2630 258 92 21 chr17 68413389 68413724 -17024756 - L1 LINE L1 -4020 2362 2052 * 3157 123 8 20 chr17 68413724 68414226 -17024254 + LOR1a LTR ERV1 1 496 -1 2630 258 92 21 chr17 68414226 68415415 -17023065 - L1 LINE L1 -4330 2052 811 715 300 121 44 chr17 68415553 68416105 -17022375 - L1M3d LINE L1 -5218 673 201 656 259 13 19 chr17 68416119 68416277 -17022203 - L1M3d LINE L1 -5697 194 38 195 125 0 0 chr17 68416353 68416393 -17022087 + (TA)n Simple_repeat Simple_repeat 1 40 0 294 335 159 45 chr17 68417066 68417385 -17021095 - L2 LINE L2 -928 2386 2105 1584 167 66 10 chr17 68417385 68417673 -17020807 - AluJb SINE Alu -8 304 1 294 335 159 45 chr17 68417673 68417914 -17020566 - L2 LINE L2 -1209 2105 1762 1131 103 6 6 chr17 68419155 68419339 -17019141 - AluSg/x SINE Alu 0 310 133 2372 96 6 6 chr17 68420031 68420343 -17018137 - AluSx SINE Alu 0 312 1 2388 62 0 20 chr17 68420464 68420770 -17017710 - AluY SINE Alu -11 300 1 22 35 0 0 chr17 68421000 68421029 -17017451 + AT_rich Low_complexity Low_complexity 1 29 0 2494 60 0 3 chr17 68421436 68421736 -17016744 - AluY SINE Alu -12 299 1 26 30 0 0 chr17 68421978 68422011 -17016469 + AT_rich Low_complexity Low_complexity 1 33 0 281 238 39 11 chr17 68422216 68422396 -17016084 + CT-rich Low_complexity Low_complexity 1 185 0 28 29 0 0 chr17 68422718 68422753 -17015727 + AT_rich Low_complexity Low_complexity 1 35 0 326 248 248 21 chr17 68423223 68423598 -17014882 - L1ME4a LINE L1 -11 6110 5651 2287 105 0 6 chr17 68423899 68424213 -17014267 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 68425033 68425054 -17013426 + AT_rich Low_complexity Low_complexity 1 21 0 308 108 27 27 chr17 68426426 68426500 -17011980 + T-rich Low_complexity Low_complexity 4 77 0 1001 156 36 12 chr17 68426687 68426854 -17011626 - FRAM SINE Alu -6 170 1 23 54 0 0 chr17 68427163 68427200 -17011280 + AT_rich Low_complexity Low_complexity 1 37 0 259 267 22 37 chr17 68427360 68427503 -17010977 + L1MDa LINE L1 76 611 -5919 302 309 39 66 chr17 68428101 68428282 -17010198 + L1MDa LINE L1 838 1013 -5517 947 211 59 0 chr17 68428339 68428576 -17009904 + L1M4 LINE L1 2788 3038 -3108 7281 181 88 26 chr17 68428577 68430033 -17008447 + L1M4b LINE L1 3 1559 -5300 2200 114 0 7 chr17 68430033 68430340 -17008140 + AluSc SINE Alu 1 305 -4 7281 181 88 26 chr17 68430340 68430413 -17008067 + L1M4b LINE L1 1559 1626 -5233 289 191 0 0 chr17 68430414 68430461 -17008019 + AluYb8 SINE Alu 135 181 -127 410 110 0 14 chr17 68430461 68430534 -17007946 + FAM SINE Alu 112 183 -2 1313 244 44 9 chr17 68430534 68430936 -17007544 + L1M4b LINE L1 1621 2031 -4867 2386 81 10 0 chr17 68430936 68431231 -17007249 - AluSp SINE Alu -15 298 1 1313 244 44 9 chr17 68431231 68431270 -17007210 + L1M4b LINE L1 2031 2067 -4831 * 1736 250 45 20 chr17 68431266 68431726 -17006754 + L1M4b LINE L1 3846 4326 -2631 2262 114 0 0 chr17 68431726 68432025 -17006455 + AluSx SINE Alu 1 299 -13 1736 250 45 20 chr17 68432025 68432169 -17006311 + L1M4b LINE L1 4326 4465 -2492 372 160 64 11 chr17 68432182 68432276 -17006204 + L1ME1 LINE L1 5236 5334 -812 1931 223 43 54 chr17 68432282 68432870 -17005610 + L1ME1 LINE L1 5435 5947 -219 3106 70 40 9 chr17 68432870 68433314 -17005166 - L1PA10 LINE L1 0 6168 5711 1931 223 43 54 chr17 68433314 68433354 -17005126 + L1ME1 LINE L1 5947 5986 -180 4693 173 26 52 chr17 68433365 68434665 -17003815 - L1MA1 LINE L1 0 6302 5042 22 56 0 0 chr17 68434724 68434760 -17003720 + AT_rich Low_complexity Low_complexity 1 36 0 2121 101 0 88 chr17 68435035 68435363 -17003117 + AluSc SINE Alu 3 301 -8 628 193 13 40 chr17 68436316 68436334 -17002146 + MLT1H LTR MaLR 402 419 -130 2398 177 62 0 chr17 68436334 68436768 -17001712 - LOR1b LTR ERV1 0 461 1 628 193 13 40 chr17 68436768 68436899 -17001581 + MLT1H LTR MaLR 419 547 -2 596 264 59 72 chr17 68436903 68437010 -17001470 - L1ME LINE L1 -578 5588 5481 2196 105 20 0 chr17 68437010 68437304 -17001176 - AluSx SINE Alu -12 300 1 596 264 59 72 chr17 68437304 68437570 -17000910 - L1ME LINE L1 -685 5481 5219 264 167 0 0 chr17 68438956 68439004 -16999476 + (TA)n Simple_repeat Simple_repeat 2 49 0 1094 97 0 13 chr17 68439125 68439280 -16999200 - AluSp/q SINE Alu 0 313 161 1970 140 0 7 chr17 68439280 68439565 -16998915 - AluSx SINE Alu -29 283 1 532 245 87 66 chr17 68439641 68439911 -16998569 - L1MC/D LINE L1 -745 5401 5138 2282 101 0 7 chr17 68439911 68440218 -16998262 - AluSq SINE Alu -8 305 1 532 245 87 66 chr17 68440218 68440379 -16998101 - L1MC/D LINE L1 -1008 5138 5113 5767 88 35 26 chr17 68440379 68441532 -16996948 - L1PA14 LINE L1 -3 6158 4976 532 245 87 66 chr17 68441532 68441708 -16996772 - L1MC/D LINE L1 -1033 5113 4942 1180 152 0 0 chr17 68441866 68442044 -16996436 - AluSc SINE Alu 0 309 132 2334 93 3 0 chr17 68442045 68442346 -16996134 - AluY SINE Alu -7 304 3 371 300 83 35 chr17 68442381 68442671 -16995809 - L1MC/D LINE L1 -1434 4712 4409 281 0 0 0 chr17 68442747 68442788 -16995692 - L1PA4 LINE L1 0 6155 6115 13342 156 19 7 chr17 68442803 68446427 -16992053 - L1MA3 LINE L1 -1 7723 4052 1830 170 3 0 chr17 68446427 68446715 -16991765 - AluJo SINE Alu -23 289 1 3977 113 28 15 chr17 68446725 68447510 -16990970 - L1MA3 LINE L1 -3946 3619 2780 * 7081 167 24 7 chr17 68447505 68448674 -16989806 - L1MA3 LINE L1 -6371 1194 6 405 219 122 133 chr17 68448677 68448734 -16989746 - L1 LINE L1 -1823 4323 4267 189 107 0 0 chr17 68448734 68448762 -16989718 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 405 219 122 133 chr17 68448762 68448991 -16989489 - L1 LINE L1 -1879 4267 4037 2074 112 24 7 chr17 68448991 68449285 -16989195 - AluSq SINE Alu -14 299 1 405 219 122 133 chr17 68449285 68449403 -16989077 - L1 LINE L1 -2109 4037 3921 2368 78 3 10 chr17 68449403 68449711 -16988769 - AluY SINE Alu -5 306 1 405 219 122 133 chr17 68449711 68449770 -16988710 - L1 LINE L1 -2225 3921 3863 322 215 48 113 chr17 68449766 68449952 -16988528 - L1MEc LINE L1 -4487 1909 1736 * 318 275 12 0 chr17 68449967 68450047 -16988433 + L2 LINE L2 3229 3309 -4 23 33 0 0 chr17 68451033 68451063 -16987417 + AT_rich Low_complexity Low_complexity 1 30 0 850 219 52 40 chr17 68451192 68451488 -16986992 + MER2 DNA MER2_type 1 345 0 31 44 0 0 chr17 68451559 68451604 -16986876 + AT_rich Low_complexity Low_complexity 1 45 0 2119 82 62 7 chr17 68451800 68452091 -16986389 - AluY SINE Alu -4 307 1 2289 121 0 0 chr17 68452692 68453005 -16985475 - AluSq SINE Alu 0 313 1 2403 146 15 0 chr17 68453887 68454284 -16984196 - MER57A LTR ERV1 0 403 1 309 289 0 13 chr17 68454477 68454553 -16983927 - L2 LINE L2 -4 3309 3235 367 305 222 21 chr17 68454748 68455082 -16983398 - L2 LINE L2 -45 3227 2827 21 100 0 0 chr17 68455522 68455592 -16982888 + AT_rich Low_complexity Low_complexity 1 70 0 1262 207 64 27 chr17 68456141 68456436 -16982044 - AluJo SINE Alu -4 308 3 14905 198 59 27 chr17 68456438 68456909 -16981571 - L1MA8 LINE L1 -22 7229 6775 273 57 0 0 chr17 68456909 68456944 -16981536 + (TG)n Simple_repeat Simple_repeat 2 36 0 14905 198 59 27 chr17 68456944 68457869 -16980611 - L1MA8 LINE L1 -476 6775 5881 2168 125 3 0 chr17 68457869 68458172 -16980308 + AluSx SINE Alu 1 304 -8 14905 198 59 27 chr17 68458172 68458888 -16979592 - L1MA8 LINE L1 -1370 5881 5190 1581 164 7 41 chr17 68458888 68459180 -16979300 - AluSx SINE Alu -30 282 1 14905 198 59 27 chr17 68459180 68459822 -16978658 - L1MA8 LINE L1 -2061 5190 4570 387 41 0 0 chr17 68459822 68459871 -16978609 + (TG)n Simple_repeat Simple_repeat 2 50 0 14905 198 59 27 chr17 68459871 68459888 -16978592 - L1MA8 LINE L1 -2681 4570 4555 2183 112 7 3 chr17 68459888 68460183 -16978297 + AluSx SINE Alu 1 296 -16 14905 198 59 27 chr17 68460183 68464656 -16973824 - L1MA8 LINE L1 -2696 4555 5 272 221 71 65 chr17 68465339 68465493 -16972987 - L1ME4a LINE L1 -7 6114 5960 1740 151 30 10 chr17 68465531 68465836 -16972644 + AluY SINE Alu 1 311 0 21 0 0 0 chr17 68466058 68466079 -16972401 + AT_rich Low_complexity Low_complexity 1 21 0 477 304 62 45 chr17 68466182 68466229 -16972251 - L1MC4a LINE L1 -188 5933 5888 2313 90 0 10 chr17 68466229 68466530 -16971950 - AluSg SINE Alu -12 298 1 477 304 62 45 chr17 68466530 68466862 -16971618 - L1MC4a LINE L1 -233 5888 5544 749 245 5 0 chr17 68466863 68467051 -16971429 + L1MB7 LINE L1 5983 6171 -13 5626 100 20 12 chr17 68467261 68468141 -16970339 - L1MA3 LINE L1 0 6305 5419 27 29 0 0 chr17 68468261 68468295 -16970185 + AT_rich Low_complexity Low_complexity 1 34 0 2021 127 0 29 chr17 68468344 68468660 -16969820 - AluSx SINE Alu -5 307 1 2687 102 3 3 chr17 68468792 68469156 -16969324 - THE1B LTR MaLR 0 364 1 29 28 0 0 chr17 68469347 68469383 -16969097 + AT_rich Low_complexity Low_complexity 1 36 0 2078 142 3 0 chr17 68469449 68469745 -16968735 - AluSx SINE Alu -15 297 1 204 40 0 0 chr17 68469970 68469995 -16968485 + (TTTC)n Simple_repeat Simple_repeat 2 26 0 368 82 0 0 chr17 68470120 68470169 -16968311 - U5 snRNA snRNA -66 50 2 2197 117 0 0 chr17 68470299 68470590 -16967890 - AluSg SINE Alu -17 293 3 277 310 26 65 chr17 68470747 68470902 -16967578 - L1ME3A LINE L1 -59 6111 5963 33 0 0 0 chr17 68471021 68471054 -16967426 + AT_rich Low_complexity Low_complexity 1 33 0 7129 49 3 9 chr17 68471055 68472720 -16965760 - L1PA7 LINE L1 -3 6151 4491 233 261 138 0 chr17 68472819 68472949 -16965531 - L1ME3A LINE L1 -2002 5806 5659 893 134 0 0 chr17 68472949 68473068 -16965412 - AluSq/x SINE Alu -192 120 2 836 115 58 75 chr17 68473068 68473242 -16965238 - L1P4 LINE L1 -638 5528 5358 * 2592 106 76 0 chr17 68473236 68473669 -16964811 + L1PBa LINE L1 2439 2904 -3959 2259 111 3 0 chr17 68473673 68473979 -16964501 + AluSc SINE Alu 3 309 0 1784 238 33 8 chr17 68473983 68474462 -16964018 + L1 LINE L1 4783 5273 -873 * 9250 177 132 11 chr17 68474455 68476542 -16961938 - L1PBa LINE L1 -4518 2345 6 935 249 76 74 chr17 68476574 68477335 -16961145 - L1ME LINE L1 -4091 2305 1546 2425 94 0 0 chr17 68477335 68477644 -16960836 - AluSc SINE Alu 0 309 1 935 249 76 74 chr17 68477644 68478417 -16960063 - L1ME LINE L1 -4850 1546 666 377 294 177 8 chr17 68478844 68479092 -16959388 - L1ME LINE L1 -6067 329 40 203 273 11 11 chr17 68479231 68479319 -16959161 + (TA)n Simple_repeat Simple_repeat 1 88 0 2323 227 49 48 chr17 68479528 68480236 -16958244 + L1MC4 LINE L1 7334 8042 0 332 335 80 54 chr17 68481196 68481420 -16957060 - MIR SINE MIR -5 257 28 207 146 0 0 chr17 68482375 68482416 -16956064 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 21 36 0 0 chr17 68482694 68482722 -16955758 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr17 68483124 68483156 -16955324 + AT_rich Low_complexity Low_complexity 1 32 0 753 159 51 64 chr17 68483772 68483929 -16954551 - FAM SINE Alu -17 158 4 369 0 0 0 chr17 68485169 68485210 -16953270 + (TG)n Simple_repeat Simple_repeat 2 42 0 270 106 0 0 chr17 68485617 68485664 -16952816 + (TG)n Simple_repeat Simple_repeat 2 48 0 2511 63 0 0 chr17 68486298 68486597 -16951883 + AluY SINE Alu 1 299 -12 507 300 84 21 chr17 68486814 68487004 -16951476 + MIR3 SINE MIR 3 204 -4 21 0 0 0 chr17 68487386 68487407 -16951073 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 68487858 68487880 -16950600 + AT_rich Low_complexity Low_complexity 1 22 0 241 237 66 13 chr17 68487964 68488040 -16950440 - L2 LINE L2 0 3272 3193 264 361 54 19 chr17 68488229 68488434 -16950046 - L2 LINE L2 -230 3042 2831 1799 125 14 4 chr17 68488578 68488859 -16949621 - L1PB3 LINE L1 -7 6147 5864 312 245 197 27 chr17 68489321 68489468 -16949012 - L1ME4a LINE L1 -7 6114 5943 1387 144 8 0 chr17 68489674 68489930 -16948550 - L1MA6 LINE L1 0 6300 6043 2182 115 32 29 chr17 68490009 68490383 -16948097 - THE1C LTR MaLR 0 375 1 4531 153 16 31 chr17 68490384 68490631 -16947849 - L1MA6 LINE L1 -251 6049 5800 234 0 0 0 chr17 68490631 68490657 -16947823 + (TG)n Simple_repeat Simple_repeat 2 27 0 4531 153 16 31 chr17 68490657 68491914 -16946566 - L1MA6 LINE L1 -500 5800 4548 5858 111 24 7 chr17 68491932 68493352 -16945128 - L1PA16 LINE L1 -9 6157 4700 1887 146 10 19 chr17 68493352 68493660 -16944820 - AluJo SINE Alu -7 305 1 5858 111 24 7 chr17 68493660 68493797 -16944683 - L1PA16 LINE L1 -1466 4700 4567 1859 143 20 3 chr17 68494119 68494413 -16944067 - AluSx SINE Alu -10 302 4 351 0 0 0 chr17 68494429 68494468 -16944012 + (TG)n Simple_repeat Simple_repeat 2 40 0 183 309 62 0 chr17 68494637 68494718 -16943762 + L2 LINE L2 2230 2315 -999 445 359 105 34 chr17 68494895 68495321 -16943159 + L2 LINE L2 2466 2929 -385 2979 166 38 21 chr17 68495321 68495925 -16942555 - L1MB7 LINE L1 -18 6166 5553 445 359 105 34 chr17 68495925 68495966 -16942514 + L2 LINE L2 2929 2966 -348 274 189 38 0 chr17 68496290 68496343 -16942137 + L2 LINE L2 3218 3272 0 2157 118 0 3 chr17 68497169 68497474 -16941006 + AluSx SINE Alu 1 304 -8 22 0 0 0 chr17 68498700 68498722 -16939758 + AT_rich Low_complexity Low_complexity 1 22 0 1894 118 50 0 chr17 68498722 68499001 -16939479 - AluSg SINE Alu -12 298 6 1970 164 0 0 chr17 68499097 68499401 -16939079 - AluSx SINE Alu -8 304 1 500 169 0 12 chr17 68499893 68499976 -16938504 + MER47A DNA MER2_type 1 82 -284 515 180 130 20 chr17 68500014 68500114 -16938366 - MER47A DNA MER2_type -253 113 3 1702 143 0 7 chr17 68500115 68500387 -16938093 + MER47A DNA MER2_type 97 366 0 340 303 101 48 chr17 68500631 68500819 -16937661 + MIR SINE MIR 4 201 -61 30 45 0 0 chr17 68500819 68500863 -16937617 + AT_rich Low_complexity Low_complexity 1 44 0 1254 211 51 0 chr17 68500975 68501231 -16937249 + AluJb SINE Alu 29 297 -15 649 277 117 8 chr17 68501312 68501568 -16936912 + HAL1 LINE L1 92 375 -2132 513 297 48 0 chr17 68501663 68501808 -16936672 + HAL1 LINE L1 361 512 -1995 246 354 0 0 chr17 68501941 68502037 -16936443 + HAL1b LINE L1 372 467 -881 352 251 91 55 chr17 68502281 68502470 -16936010 - L1MEc LINE L1 -5191 1205 1005 1977 139 3 3 chr17 68502470 68502758 -16935722 - AluSx SINE Alu -24 288 1 352 251 91 55 chr17 68502758 68502787 -16935693 - L1MEc LINE L1 -5391 1005 979 500 282 107 41 chr17 68503246 68503317 -16935163 - L1M4 LINE L1 -965 5181 5116 2180 120 3 0 chr17 68503317 68503617 -16934863 + AluSx SINE Alu 1 301 -11 500 282 107 41 chr17 68503617 68504041 -16934439 - L1M4 LINE L1 -1030 5116 4646 1079 226 83 31 chr17 68504041 68504368 -16934112 - MER2 DNA MER2_type 0 344 1 500 282 107 41 chr17 68504368 68504406 -16934074 - L1M4 LINE L1 -1500 4646 4612 226 167 62 0 chr17 68504571 68504619 -16933861 - L1M4 LINE L1 -2003 4143 4093 2279 95 10 0 chr17 68504809 68505114 -16933366 + AluSx SINE Alu 1 308 -4 1337 250 36 43 chr17 68505164 68505632 -16932848 - MLT1C LTR MaLR 0 467 3 22 88 0 0 chr17 68505649 68505706 -16932774 + AT_rich Low_complexity Low_complexity 1 57 0 2471 78 0 0 chr17 68505881 68506189 -16932291 + AluY SINE Alu 1 308 -3 1308 208 12 0 chr17 68506189 68506430 -16932050 - Charlie1b DNA MER1_type -279 244 1 403 171 110 140 chr17 68506438 68506702 -16931778 + MER112 DNA MER1_type 1 256 0 250 221 105 47 chr17 68506751 68506837 -16931643 - L1ME LINE L1 -588 5574 5484 2092 130 3 0 chr17 68506853 68507145 -16931335 + AluJo SINE Alu 1 293 -19 243 222 83 0 chr17 68507244 68507316 -16931164 - L1ME LINE L1 -848 5332 5255 2288 169 71 8 chr17 68507345 68507825 -16930655 - L1MB3 LINE L1 -1 6182 5673 32 0 0 0 chr17 68507906 68507938 -16930542 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr17 68507984 68508009 -16930471 + AT_rich Low_complexity Low_complexity 1 25 0 1373 224 110 5 chr17 68508667 68509104 -16929376 - Charlie4a DNA MER1_type -2 506 24 4473 172 28 40 chr17 68509355 68509853 -16928627 - L1MC3 LINE L1 -2 7783 7280 2105 130 7 3 chr17 68509853 68510154 -16928326 - AluSx SINE Alu -10 302 1 4473 172 28 40 chr17 68510154 68510721 -16927759 - L1MC3 LINE L1 -505 7280 6618 698 166 138 14 chr17 68510721 68510866 -16927614 - MER6B DNA MER2_type 0 210 48 1985 272 94 13 chr17 68511125 68511436 -16927044 + L1ME3A LINE L1 4874 5159 -1011 1790 144 26 20 chr17 68511436 68511741 -16926739 + AluSx SINE Alu 6 312 0 1985 272 94 13 chr17 68511741 68512512 -16925968 + L1ME3A LINE L1 5159 6048 -122 309 96 0 77 chr17 68512657 68512709 -16925771 - Alu SINE Alu -17 283 236 275 372 87 34 chr17 68512902 68513340 -16925140 + L2 LINE L2 2199 2659 -655 737 97 0 0 chr17 68514091 68514194 -16924286 - AluSc SINE Alu -1 308 206 201 208 13 65 chr17 68514811 68514888 -16923592 + GA-rich Low_complexity Low_complexity 1 73 0 28 48 0 0 chr17 68514929 68514971 -16923509 + AT_rich Low_complexity Low_complexity 1 42 0 511 315 23 46 chr17 68515506 68515725 -16922755 + MIR SINE MIR 48 261 -1 2194 187 16 0 chr17 68515838 68516265 -16922215 - L1MB1 LINE L1 0 6168 5735 1571 129 43 0 chr17 68516265 68516521 -16921959 - L1PBa LINE L1 -6595 268 2 1419 158 40 0 chr17 68516539 68516786 -16921694 - L1MB1 LINE L1 -431 5737 5481 1843 134 29 35 chr17 68517082 68517212 -16921268 + AluSx SINE Alu 1 130 -182 282 56 0 0 chr17 68517212 68517248 -16921232 + (TA)n Simple_repeat Simple_repeat 2 37 0 1843 134 29 35 chr17 68517248 68517431 -16921049 + AluSx SINE Alu 130 312 0 1238 233 4 8 chr17 68518094 68518334 -16920146 + MER8 DNA MER2_type 1 239 0 1080 265 167 5 chr17 68518347 68518865 -16919615 - L2 LINE L2 -14 3299 2690 1825 133 63 0 chr17 68519921 68520206 -16918274 + AluSx SINE Alu 1 303 -9 1591 168 87 11 chr17 68520462 68520748 -16917732 + AluJb SINE Alu 3 310 -2 21 36 0 0 chr17 68521534 68521562 -16916918 + AT_rich Low_complexity Low_complexity 1 28 0 282 301 165 0 chr17 68521871 68521974 -16916506 + L2 LINE L2 3193 3312 -1 1569 188 3 24 chr17 68522481 68522807 -16915673 - AluJo SINE Alu 0 320 1 23 54 0 0 chr17 68523622 68523659 -16914821 + AT_rich Low_complexity Low_complexity 1 37 0 34 42 0 0 chr17 68524143 68524191 -16914289 + AT_rich Low_complexity Low_complexity 1 48 0 300 158 0 0 chr17 68524225 68524282 -16914198 + CT-rich Low_complexity Low_complexity 2 58 0 2061 139 0 3 chr17 68524827 68525128 -16913352 - AluSx SINE Alu -12 300 1 1168 190 80 59 chr17 68525279 68525616 -16912864 - MER2 DNA MER2_type 0 344 1 7729 171 38 26 chr17 68525939 68528355 -16910125 - L1PB4 LINE L1 -8 6851 4384 4105 250 35 99 chr17 68528367 68529487 -16908993 - L1PB4 LINE L1 -3945 2905 1715 2294 98 3 7 chr17 68529487 68529793 -16908687 - AluY SINE Alu -6 305 1 4105 250 35 99 chr17 68529793 68531395 -16907085 - L1PB4 LINE L1 -5135 1715 5 234 361 19 9 chr17 68531689 68531797 -16906683 - L2 LINE L2 -6 3307 3199 180 0 0 0 chr17 68532892 68532912 -16905568 + (TTG)n Simple_repeat Simple_repeat 2 21 0 213 143 0 71 chr17 68533222 68533264 -16905216 + MIR3 SINE MIR 127 165 -43 232 337 29 27 chr17 68533654 68533771 -16904709 - MIR3 SINE MIR -30 178 61 2150 122 0 3 chr17 68534204 68534500 -16903980 - AluSg SINE Alu -14 296 2 190 393 84 19 chr17 68534696 68534803 -16903677 - L2 LINE L2 -8 3264 3151 497 295 148 5 chr17 68535136 68535353 -16903127 - MIR SINE MIR 0 262 15 456 284 19 86 chr17 68536549 68536862 -16901618 + HAL1b LINE L1 394 685 -663 627 183 17 0 chr17 68537187 68537307 -16901173 + L1 LINE L1 3734 3855 -2291 14872 201 84 21 chr17 68537313 68542987 -16895493 + L1MA8 LINE L1 4 5322 -1620 387 0 0 0 chr17 68542987 68543030 -16895450 + (CA)n Simple_repeat Simple_repeat 2 44 0 14872 201 84 21 chr17 68543030 68543578 -16894902 + L1MA8 LINE L1 5322 5834 -1108 1393 204 43 0 chr17 68543578 68543858 -16894622 + AluJo SINE Alu 1 292 -20 14872 201 84 21 chr17 68543858 68544096 -16894384 + L1MA8 LINE L1 5834 6940 -2 378 155 14 0 chr17 68544101 68544172 -16894308 + L1MA9 LINE L1 6240 6311 -1 205 286 0 0 chr17 68544727 68544769 -16893711 - L2 LINE L2 -30 3283 3242 22 0 0 0 chr17 68545109 68545131 -16893349 + AT_rich Low_complexity Low_complexity 1 22 0 2337 92 0 0 chr17 68545603 68545896 -16892584 - AluSg SINE Alu -17 293 1 22 0 0 0 chr17 68546154 68546176 -16892304 + AT_rich Low_complexity Low_complexity 1 22 0 2226 83 0 36 chr17 68547720 68548022 -16890458 - AluSg SINE Alu -19 291 1 1989 115 62 12 chr17 68548260 68548581 -16889899 - MER1B DNA MER1_type 0 337 1 908 134 67 21 chr17 68550812 68551006 -16887474 + L1 LINE L1 5195 5397 -749 5359 88 13 5 chr17 68551887 68552658 -16885822 + L1PA13 LINE L1 5387 6163 0 2286 78 3 20 chr17 68552721 68553027 -16885453 + AluY SINE Alu 1 301 -10 667 242 60 51 chr17 68553317 68553532 -16884948 + MIR SINE MIR 16 232 -30 23 0 0 0 chr17 68553534 68553557 -16884923 + AT_rich Low_complexity Low_complexity 1 23 0 551 124 6 152 chr17 68553672 68553811 -16884669 - L1MB7 LINE L1 0 6184 6075 1901 159 0 10 chr17 68553811 68554119 -16884361 - AluJb SINE Alu -2 310 6 551 124 6 152 chr17 68554119 68554157 -16884323 - L1MB7 LINE L1 -109 6075 6033 237 139 0 0 chr17 68554130 68554166 -16884314 - L1ME3 LINE L1 -113 6049 6014 * 22 70 0 0 chr17 68554629 68554672 -16883808 + AT_rich Low_complexity Low_complexity 1 43 0 1952 127 3 11 chr17 68555008 68555291 -16883189 - AluSx SINE Alu -27 285 5 234 363 41 20 chr17 68555490 68555636 -16882844 - L2 LINE L2 -593 2721 2573 402 145 0 0 chr17 68555876 68555945 -16882535 - L1PA16 LINE L1 -16 6150 6082 342 0 0 0 chr17 68556054 68556092 -16882388 + (CA)n Simple_repeat Simple_repeat 2 39 0 2177 126 37 26 chr17 68556158 68556507 -16881973 - THE1B LTR MaLR 0 364 12 332 279 22 52 chr17 68557132 68557268 -16881212 - LTR33 LTR ERVL -385 136 5 1651 198 3 7 chr17 68557593 68557896 -16880584 + AluJo SINE Alu 1 302 -10 1937 214 112 8 chr17 68558252 68558733 -16879747 - L1ME3A LINE L1 0 6170 5640 3987 71 4 2 chr17 68558770 68559290 -16879190 + L1PA10 LINE L1 5645 6165 -3 22 35 0 0 chr17 68561026 68561055 -16877425 + AT_rich Low_complexity Low_complexity 1 29 0 3033 217 57 14 chr17 68561161 68561995 -16876485 - L1M1 LINE L1 -6562 1003 19 7286 180 41 19 chr17 68561998 68562957 -16875523 - L1M1 LINE L1 -3956 2372 1436 2218 99 0 34 chr17 68562957 68563279 -16875201 - AluY SINE Alu 0 311 1 7286 180 41 19 chr17 68563279 68564646 -16873834 - L1M1 LINE L1 -4892 1436 2 212 288 51 0 chr17 68565252 68565311 -16873169 - L2 LINE L2 -1 3312 3251 372 353 79 12 chr17 68566996 68567248 -16871232 + L2 LINE L2 1641 1909 -1405 24 32 0 0 chr17 68567507 68567538 -16870942 + AT_rich Low_complexity Low_complexity 1 31 0 714 259 40 5 chr17 68567719 68567920 -16870560 + Charlie8 DNA MER1_type 1 208 -2209 357 266 55 41 chr17 68567985 68568203 -16870277 + L1M4 LINE L1 2784 3004 -3142 343 252 168 0 chr17 68568207 68568326 -16870154 + L1M4 LINE L1 3059 3197 -2949 2223 178 42 5 chr17 68568421 68568826 -16869654 - MSTB LTR MaLR -4 422 3 260 183 83 0 chr17 68568893 68568953 -16869527 + Charlie8 DNA MER1_type 1364 1428 -989 2981 175 5 5 chr17 68568980 68569535 -16868945 - L1MB5 LINE L1 -1 6173 5619 1061 96 26 0 chr17 68569999 68570155 -16868325 + L1MA3 LINE L1 6146 6305 0 25 31 0 0 chr17 68570156 68570188 -16868292 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr17 68570298 68570326 -16868154 + AT_rich Low_complexity Low_complexity 1 28 0 1854 141 0 0 chr17 68570388 68570657 -16867823 + AluSx SINE Alu 42 310 -2 340 231 104 37 chr17 68570667 68570801 -16867679 + Tigger8 DNA MER2_type 355 497 -169 1566 121 24 129 chr17 68571106 68571446 -16867034 + AluYb8 SINE Alu 1 304 -14 207 315 34 82 chr17 68571611 68571757 -16866723 - L2 LINE L2 -290 3023 2885 1458 182 42 26 chr17 68572681 68572988 -16865492 + AluJo SINE Alu 1 312 0 396 286 21 69 chr17 68573646 68573835 -16864645 - MIR SINE MIR -63 199 20 1736 148 3 85 chr17 68573956 68574139 -16864341 - AluJo SINE Alu -20 292 144 2006 145 0 0 chr17 68574139 68574429 -16864051 - AluSq SINE Alu -23 290 1 1736 148 3 85 chr17 68574429 68574563 -16863917 - AluJo SINE Alu -168 144 1 375 257 171 9 chr17 68574722 68574827 -16863653 - MIR SINE MIR -139 123 2 2351 91 3 7 chr17 68575184 68575492 -16862988 + AluSx SINE Alu 1 307 -5 324 232 43 38 chr17 68576493 68576678 -16861802 - L1M4 LINE L1 -3106 3040 2855 318 262 6 17 chr17 68576681 68576772 -16861708 - L1MC4 LINE L1 -1290 6740 6619 759 263 126 22 chr17 68576793 68577845 -16860635 - L1MC4 LINE L1 -1191 6617 5493 1920 161 7 7 chr17 68577845 68578150 -16860330 + AluJb SINE Alu 1 305 -7 759 263 126 22 chr17 68578150 68578297 -16860183 - L1MC4 LINE L1 -2315 5493 5363 742 222 28 81 chr17 68578305 68578589 -16859891 - L1ME1 LINE L1 -6 6160 5892 * 1694 193 50 18 chr17 68578587 68579152 -16859328 - L1ME1 LINE L1 -645 5521 4943 2297 99 10 0 chr17 68579156 68579460 -16859020 + AluSq SINE Alu 1 307 -6 2955 248 67 12 chr17 68579476 68580474 -16858006 - L1ME1 LINE L1 -2789 3357 2305 343 235 80 19 chr17 68580526 68580688 -16857792 + (CATA)n Simple_repeat Simple_repeat 4 175 0 393 207 62 21 chr17 68580709 68580854 -16857626 + (CATG)n Simple_repeat Simple_repeat 3 153 0 212 253 73 27 chr17 68580927 68581077 -16857403 + (TATATG)n Simple_repeat Simple_repeat 6 162 0 * 225 195 21 95 chr17 68580991 68581181 -16857299 + (TAATG)n Simple_repeat Simple_repeat 3 178 0 340 247 45 32 chr17 68581296 68581450 -16857030 + (CATG)n Simple_repeat Simple_repeat 3 158 0 321 288 46 13 chr17 68581436 68581589 -16856891 + (TATG)n Simple_repeat Simple_repeat 3 160 0 * 318 213 60 0 chr17 68581705 68581855 -16856625 + (CATG)n Simple_repeat Simple_repeat 2 160 0 242 187 56 9 chr17 68581931 68582038 -16856442 + (CATG)n Simple_repeat Simple_repeat 1 112 0 257 255 81 13 chr17 68582053 68582202 -16856278 + (CATG)n Simple_repeat Simple_repeat 2 160 0 268 270 46 29 chr17 68582277 68582451 -16856029 + (TATG)n Simple_repeat Simple_repeat 4 180 0 267 289 51 26 chr17 68582513 68582669 -16855811 + (CATG)n Simple_repeat Simple_repeat 3 162 0 205 273 33 66 chr17 68582631 68582814 -16855666 + (TATATG)n Simple_repeat Simple_repeat 1 177 0 * 283 248 62 16 chr17 68582721 68582850 -16855630 + (TATG)n Simple_repeat Simple_repeat 3 137 0 1178 192 0 18 chr17 68582914 68583138 -16855342 + AluSg/x SINE Alu 78 297 -15 212 377 65 0 chr17 68583174 68583251 -16855229 + L2 LINE L2 3186 3267 -5 317 287 74 9 chr17 68583421 68583529 -16854951 + MIR SINE MIR 28 142 -120 343 182 15 0 chr17 68585217 68585283 -16853197 - MLT1D LTR MaLR -163 342 276 289 193 0 0 chr17 68585293 68585350 -16853130 - L1M4 LINE L1 -1553 4593 4537 1966 144 17 0 chr17 68586405 68586704 -16851776 + AluJo SINE Alu 1 304 -8 363 259 60 0 chr17 68587522 68587638 -16850842 - MER117 DNA MER1_type -68 129 7 270 0 0 0 chr17 68588518 68588548 -16849932 + (CA)n Simple_repeat Simple_repeat 2 31 0 541 269 62 78 chr17 68589069 68589270 -16849210 + MIR SINE MIR 2 200 -62 2368 84 42 25 chr17 68589270 68589626 -16848854 - THE1B LTR MaLR 0 364 3 541 269 62 78 chr17 68589626 68589680 -16848800 + MIR SINE MIR 200 253 -9 2325 150 28 7 chr17 68589935 68590362 -16848118 - L1MB7 LINE L1 -1 6183 5748 978 212 85 35 chr17 68591448 68591764 -16846716 - MER2 DNA MER2_type -13 332 1 370 348 82 0 chr17 68591850 68592083 -16846397 - L1ME2 LINE L1 -207 5957 5706 4321 178 26 36 chr17 68592206 68593066 -16845414 - MER52A LTR ERV1 0 1755 905 3003 197 152 14 chr17 68593069 68593832 -16844648 - MER52A LTR ERV1 -650 1105 238 413 310 76 41 chr17 68593887 68594177 -16844303 + HAL1b LINE L1 478 777 -571 1379 174 0 0 chr17 68595030 68595260 -16843220 + Tigger7 DNA MER2_type 1 230 -475 472 160 128 0 chr17 68595273 68595367 -16843113 + Tigger7 DNA MER2_type 2482 2587 0 29 28 0 0 chr17 68595400 68595436 -16843044 + AT_rich Low_complexity Low_complexity 1 36 0 4095 91 30 10 chr17 68595436 68595786 -16842694 - L1PB1 LINE L1 0 6151 5782 279 79 0 0 chr17 68595786 68595824 -16842656 + (TG)n Simple_repeat Simple_repeat 2 39 0 4095 91 30 10 chr17 68595824 68596077 -16842403 - L1PB1 LINE L1 -369 5782 5536 9406 127 41 7 chr17 68596078 68598712 -16839768 - L1PBa LINE L1 -3364 3498 625 974 149 10 25 chr17 68598704 68598905 -16839575 - L1PBa LINE L1 -6663 200 3 * 2556 193 35 16 chr17 68599082 68599850 -16838630 + L1ME1 LINE L1 5128 5906 -260 5687 252 40 9 chr17 68600050 68601482 -16836998 + L1ME LINE L1 2693 4198 -1948 369 0 0 0 chr17 68601482 68601523 -16836957 + (CTA)n Simple_repeat Simple_repeat 1 41 0 5687 252 40 9 chr17 68601523 68601973 -16836507 + L1ME LINE L1 4198 4633 -1513 381 328 159 9 chr17 68602058 68602290 -16836190 + L1ME LINE L1 5496 5762 -359 21 0 0 0 chr17 68603040 68603061 -16835419 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 68603630 68603659 -16834821 + AT_rich Low_complexity Low_complexity 1 29 0 270 271 14 0 chr17 68604842 68604912 -16833568 - L2 LINE L2 -1 3271 3201 1822 263 46 39 chr17 68605188 68606276 -16832204 + L1ME3A LINE L1 4299 5396 -774 2407 93 0 0 chr17 68606276 68606577 -16831903 + AluSq SINE Alu 1 301 -12 1822 263 46 39 chr17 68606577 68607136 -16831344 + L1ME3A LINE L1 5396 5950 -220 1337 214 47 23 chr17 68607345 68607644 -16830836 + AluJo SINE Alu 1 306 -6 1491 162 30 7 chr17 68607892 68608216 -16830264 - L1PA8 LINE L1 -9 6163 5790 * 2860 161 31 1 chr17 68608202 68608796 -16829684 + L1PA13 LINE L1 1963 2585 -4212 218 269 26 13 chr17 68609066 68609144 -16829336 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 226 209 75 15 chr17 68609407 68609474 -16829006 + MLT1J LTR MaLR 3 73 -438 2195 110 24 24 chr17 68609845 68610181 -16828299 - MER1B DNA MER1_type 0 337 2 1035 135 5 49 chr17 68610270 68610455 -16828025 + AluSg/x SINE Alu 136 312 0 34 24 0 0 chr17 68610959 68611000 -16827480 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr17 68611158 68611183 -16827297 + AT_rich Low_complexity Low_complexity 1 25 0 12464 204 35 36 chr17 68611183 68613111 -16825369 - L1MA7 LINE L1 -3 6492 4564 2217 119 0 0 chr17 68613111 68613404 -16825076 + AluSx SINE Alu 1 293 -19 12464 204 35 36 chr17 68613404 68613790 -16824690 - L1MA7 LINE L1 -1931 4564 4179 6869 55 5 47 chr17 68613790 68615440 -16823040 - SVA Other Other -760 1384 1 12464 204 35 36 chr17 68615440 68617082 -16821398 - L1MA7 LINE L1 -2316 4179 2537 1985 136 24 35 chr17 68617082 68617458 -16821022 + THE1C LTR MaLR 1 372 -3 12464 204 35 36 chr17 68617458 68618022 -16820458 - L1MA7 LINE L1 -3958 2537 1974 2019 154 0 0 chr17 68618022 68618315 -16820165 - AluSx SINE Alu -19 293 1 12464 204 35 36 chr17 68618315 68619319 -16819161 - L1MA7 LINE L1 -4521 1974 1312 2662 138 19 2 chr17 68619319 68619740 -16818740 + MSTA LTR MaLR 1 428 0 12464 204 35 36 chr17 68619740 68621051 -16817429 - L1MA7 LINE L1 -5183 1312 1 471 320 109 52 chr17 68622463 68622978 -16815502 - L2 LINE L2 -5 3308 2766 3852 183 37 25 chr17 68622988 68623326 -16815154 - L1MB8 LINE L1 0 6178 5846 1580 167 0 25 chr17 68623326 68623608 -16814872 - AluJo SINE Alu -4 308 34 3852 183 37 25 chr17 68623608 68624223 -16814257 - L1MB8 LINE L1 -332 5846 5212 25 0 0 0 chr17 68624350 68624375 -16814105 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr17 68624496 68624531 -16813949 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr17 68624665 68624707 -16813773 + AT_rich Low_complexity Low_complexity 1 42 0 1965 123 40 65 chr17 68624882 68625280 -16813200 - MSTB LTR MaLR -38 388 1 681 300 66 69 chr17 68625316 68625482 -16812998 - L2 LINE L2 -1 3312 3147 2177 109 0 0 chr17 68625482 68625791 -16812689 - AluSx SINE Alu 0 309 1 681 300 66 69 chr17 68625791 68626162 -16812318 - L2 LINE L2 -166 3147 2768 600 278 137 19 chr17 68626245 68626508 -16811972 - MLT1I LTR MaLR -17 392 99 2458 108 37 0 chr17 68626839 68627190 -16811290 - THE1B LTR MaLR 0 364 1 342 279 67 50 chr17 68627456 68627696 -16810784 + HAL1 LINE L1 2245 2488 -19 278 277 90 50 chr17 68627774 68627946 -16810534 + L1ME LINE L1 5591 5687 -434 2418 81 0 0 chr17 68627946 68628244 -16810236 + AluY SINE Alu 1 298 -13 278 277 90 50 chr17 68628244 68628383 -16810097 + L1ME LINE L1 5687 5819 -302 931 181 0 0 chr17 68628667 68628822 -16809658 - FRAM SINE Alu -10 156 2 32 26 0 0 chr17 68629870 68629909 -16808571 + AT_rich Low_complexity Low_complexity 1 39 0 313 281 91 8 chr17 68630088 68630209 -16808271 + L1ME LINE L1 5495 5625 -496 23 33 0 0 chr17 68630311 68630341 -16808139 + AT_rich Low_complexity Low_complexity 1 30 0 747 317 258 7 chr17 68630903 68631601 -16806879 + L3 LINE CR1 324 1196 -381 507 284 16 75 chr17 68631680 68631769 -16806711 - MIR SINE MIR -2 260 167 488 67 44 0 chr17 68631769 68631859 -16806621 + (TA)n Simple_repeat Simple_repeat 2 95 0 2111 120 0 7 chr17 68631859 68632159 -16806321 - AluSx SINE Alu -14 298 1 507 284 16 75 chr17 68632159 68632330 -16806150 - MIR SINE MIR -93 169 20 201 365 32 45 chr17 68632326 68632482 -16805998 + L3 LINE CR1 1296 1449 -128 * 223 256 22 89 chr17 68633164 68633254 -16805226 - MIR3 SINE MIR -28 180 97 2316 92 3 25 chr17 68634010 68634327 -16804153 - AluSx SINE Alu -2 310 1 241 298 143 0 chr17 68634954 68635038 -16803442 - L2 LINE L2 -17 3255 3160 1470 200 3 42 chr17 68635375 68635685 -16802795 + AluJo SINE Alu 1 298 -14 2041 272 222 54 chr17 68635775 68635922 -16802558 - L2 LINE L2 0 3313 3192 420 20 0 0 chr17 68635922 68635971 -16802509 + (CA)n Simple_repeat Simple_repeat 1 49 0 2041 272 222 54 chr17 68635971 68636406 -16802074 - L2 LINE L2 -121 3192 2831 2351 103 0 13 chr17 68636406 68636718 -16801762 - AluSg SINE Alu -2 308 1 2041 272 222 54 chr17 68636718 68637729 -16800751 - L2 LINE L2 -482 2831 1414 220 113 38 57 chr17 68638082 68638135 -16800345 + (TTAA)n Simple_repeat Simple_repeat 3 54 0 526 54 0 130 chr17 68639215 68639307 -16799173 - MADE1 DNA Mariner 0 80 1 307 347 78 8 chr17 68639612 68639857 -16798623 + HERV16 LTR ERVL 1110 1371 -3625 318 286 0 0 chr17 68640126 68640210 -16798270 + HERV16 LTR ERVL 1716 1799 -3197 1707 224 94 51 chr17 68640290 68640542 -16797938 - HAL1b LINE L1 -54 1294 1054 821 176 0 0 chr17 68640542 68640673 -16797807 - FLAM_C SINE Alu 0 133 3 1707 224 94 51 chr17 68640673 68641237 -16797243 - HAL1b LINE L1 -294 1054 443 379 355 18 18 chr17 68642624 68642793 -16795687 + L3 LINE CR1 1408 1576 -1 2187 104 10 0 chr17 68643510 68643807 -16794673 - AluSp SINE Alu -13 300 1 23 0 0 0 chr17 68645609 68645632 -16792848 + AT_rich Low_complexity Low_complexity 1 23 0 13273 79 8 0 chr17 68645799 68646262 -16792218 - L1PA7 LINE L1 -8 6146 5688 2158 103 0 51 chr17 68646262 68646574 -16791906 - AluY SINE Alu -15 296 1 13273 79 8 0 chr17 68646574 68648686 -16789794 - L1PA7 LINE L1 -466 5688 3562 26 82 0 0 chr17 68655650 68655711 -16782769 + AT_rich Low_complexity Low_complexity 1 61 0 239 296 191 33 chr17 68656410 68656562 -16781918 - MIR3 SINE MIR -14 194 19 283 300 20 10 chr17 68656876 68656976 -16781504 - MIR SINE MIR 0 262 162 196 229 114 14 chr17 68657032 68657102 -16781378 - MIR SINE MIR -106 156 80 22 0 0 0 chr17 68658710 68658732 -16779748 + AT_rich Low_complexity Low_complexity 1 22 0 383 243 75 0 chr17 68660020 68660127 -16778353 + MER91C DNA MER1_type 26 140 0 632 290 265 39 chr17 68660136 68660977 -16777503 - L2 LINE L2 -80 3192 2158 348 279 139 0 chr17 68661085 68661207 -16777273 - L2 LINE L2 0 3272 3134 188 327 0 59 chr17 68662296 68662397 -16776083 - L2 LINE L2 -650 2664 2570 182 327 131 35 chr17 68662397 68662764 -16775716 - L2 LINE L2 -910 2404 2003 * 206 222 19 37 chr17 68662763 68662817 -16775663 + MIR SINE MIR 147 199 -63 229 273 91 13 chr17 68663774 68663851 -16774629 - L2 LINE L2 -18 3254 3172 2517 68 7 0 chr17 68667206 68667515 -16770965 + AluSp SINE Alu 1 311 -2 532 330 252 10 chr17 68667952 68668555 -16769925 + L2 LINE L2 2037 2785 -529 2039 121 0 27 chr17 68668555 68668853 -16769627 + AluSg SINE Alu 1 290 -20 206 103 0 26 chr17 68668922 68668961 -16769519 + (TA)n Simple_repeat Simple_repeat 1 38 0 258 331 103 17 chr17 68669048 68669223 -16769257 + L2 LINE L2 3110 3299 -14 234 358 0 0 chr17 68669832 68669913 -16768567 - L2 LINE L2 -16 3256 3176 186 43 0 0 chr17 68670797 68670820 -16767660 + (CA)n Simple_repeat Simple_repeat 1 23 0 2141 108 3 7 chr17 68670990 68671287 -16767193 - AluY SINE Alu -15 296 1 238 248 64 38 chr17 68672024 68672181 -16766299 + L1M4 LINE L1 4280 4440 -1706 247 287 115 37 chr17 68672232 68672667 -16765813 - HAL1 LINE L1 -1196 1311 843 1448 208 65 37 chr17 68672697 68673126 -16765354 - MLT1D LTR MaLR -1 504 64 2097 170 47 58 chr17 68673849 68674383 -16764097 - L1MA9 LINE L1 0 6312 5785 585 274 105 29 chr17 68674615 68674929 -16763551 - LTR16C LTR ERVL 0 491 154 313 272 130 43 chr17 68675136 68675412 -16763068 + HAL1 LINE L1 777 1076 -1431 630 290 123 34 chr17 68675607 68676135 -16762345 + HAL1 LINE L1 1308 1882 -625 303 331 6 54 chr17 68676382 68676548 -16761932 + HAL1b LINE L1 748 905 -443 197 296 74 94 chr17 68677960 68678163 -16760317 + MIR SINE MIR 34 232 -30 22 70 0 0 chr17 68680055 68680098 -16758382 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr17 68680549 68680577 -16757903 + AT_rich Low_complexity Low_complexity 1 28 0 2190 76 28 17 chr17 68680577 68680865 -16757615 - AluY SINE Alu -20 291 1 22 35 0 0 chr17 68681723 68681752 -16756728 + AT_rich Low_complexity Low_complexity 1 29 0 706 40 0 20 chr17 68682107 68682207 -16756273 + (TTTC)n Simple_repeat Simple_repeat 3 100 0 2411 68 0 19 chr17 68682337 68682646 -16755834 + AluY SINE Alu 1 303 -8 1931 152 3 10 chr17 68683702 68684005 -16754475 - AluSq SINE Alu -12 301 1 40 49 0 0 chr17 68684155 68684216 -16754264 + AT_rich Low_complexity Low_complexity 1 61 0 6940 171 120 20 chr17 68684776 68686322 -16752158 - MER52A LTR ERV1 0 1755 55 2063 138 0 10 chr17 68686880 68687191 -16751289 + AluJb SINE Alu 1 308 -4 504 0 0 0 chr17 68687252 68687308 -16751172 + (CA)n Simple_repeat Simple_repeat 2 57 0 2253 76 14 3 chr17 68688069 68688360 -16750120 - AluSc SINE Alu -15 294 1 2175 68 71 14 chr17 68688442 68688736 -16749744 - AluY SINE Alu 0 311 1 26 30 0 0 chr17 68689228 68689261 -16749219 + AT_rich Low_complexity Low_complexity 1 33 0 2322 77 3 0 chr17 68689630 68689915 -16748565 - AluY SINE Alu -25 286 1 434 232 67 24 chr17 68690084 68690248 -16748232 - L1ME3A LINE L1 -218 5952 5782 886 287 68 18 chr17 68690365 68690946 -16747534 - L1ME3A LINE L1 -557 5607 4982 2344 186 47 17 chr17 68690953 68691480 -16747000 - L1MB8 LINE L1 -6 6172 5630 376 296 83 35 chr17 68691487 68691717 -16746763 - L1ME3A LINE L1 -1161 4985 4745 476 263 169 44 chr17 68691887 68692185 -16746295 - L1ME3A LINE L1 -1618 4528 4269 1999 110 19 45 chr17 68692185 68692495 -16745985 - AluSg SINE Alu -8 302 1 476 263 169 44 chr17 68692495 68692752 -16745728 - L1ME3A LINE L1 -1877 4269 4045 2220 117 7 0 chr17 68692752 68693060 -16745420 - AluSg SINE Alu 0 310 1 476 263 169 44 chr17 68693060 68693137 -16745343 - L1ME3A LINE L1 -2101 4045 3816 250 174 29 0 chr17 68693407 68693476 -16745004 + L1M4 LINE L1 2915 2985 -3161 418 311 81 33 chr17 68693742 68694138 -16744342 + L1M4 LINE L1 3364 3778 -2368 629 313 56 13 chr17 68694191 68694581 -16743899 + L1M4 LINE L1 3365 3771 -2375 548 117 0 0 chr17 68694684 68694761 -16743719 + AluSg SINE Alu 3 79 -231 1320 137 41 112 chr17 68694761 68694918 -16743562 + Tigger1 DNA MER2_type 2127 2253 -165 1570 50 0 20 chr17 68694918 68695119 -16743361 - MER107 DNA MER1_type 0 197 1 1320 137 41 112 chr17 68695119 68695275 -16743205 + Tigger1 DNA MER2_type 2253 2418 0 733 145 8 0 chr17 68695499 68695616 -16742864 + L1PB4 LINE L1 6032 6149 -7 1670 180 25 0 chr17 68696157 68696440 -16742040 - AluJb SINE Alu -22 290 1 333 318 59 59 chr17 68698160 68698399 -16740081 + L1M4 LINE L1 2592 2830 -3316 2257 102 0 0 chr17 68698479 68698773 -16739707 - AluSg1 SINE Alu -15 294 1 1935 184 21 21 chr17 68698773 68699158 -16739322 + MLT1C LTR MaLR 81 465 -2 881 249 15 12 chr17 68699162 68699496 -16738984 + L1M4 LINE L1 2848 3182 -2964 279 215 31 77 chr17 68699494 68699624 -16738856 + L1ME3A LINE L1 5844 5967 -203 * 855 104 6 49 chr17 68699711 68699894 -16738586 + (GGGA)n Simple_repeat Simple_repeat 2 176 0 622 114 12 60 chr17 68699897 68700064 -16738416 + (GGAA)n Simple_repeat Simple_repeat 1 159 0 1569 290 11 34 chr17 68701361 68701927 -16736553 - L2 LINE L2 -385 2929 2377 2343 110 0 0 chr17 68702041 68702350 -16736130 - AluSx SINE Alu -3 309 1 201 295 0 0 chr17 68703624 68703685 -16734795 + GA-rich Low_complexity Low_complexity 3 63 0 608 279 127 38 chr17 68704225 68704620 -16733860 + L2 LINE L2 2858 3287 -26 372 306 99 0 chr17 68705278 68705389 -16733091 + L2 LINE L2 3150 3271 -1 1985 56 0 4 chr17 68705400 68705664 -16732816 + AluY SINE Alu 48 310 0 233 270 51 95 chr17 68706749 68706879 -16731601 - L1ME LINE L1 -204 5917 5783 2129 121 7 3 chr17 68706879 68707184 -16731296 - AluSp SINE Alu -7 306 1 233 270 51 95 chr17 68707184 68707199 -16731281 - L1ME LINE L1 -338 5783 5769 2233 83 7 3 chr17 68707199 68707488 -16730992 - AluSc SINE Alu -19 290 1 233 270 51 95 chr17 68707488 68707532 -16730948 - L1ME LINE L1 -352 5769 5725 1927 136 31 0 chr17 68707532 68707818 -16730662 - AluSx SINE Alu -17 295 1 233 270 51 95 chr17 68707818 68707941 -16730539 - L1ME LINE L1 -396 5725 5617 336 254 37 63 chr17 68708053 68708235 -16730245 - L1ME LINE L1 -689 5432 5259 564 47 58 0 chr17 68709188 68709274 -16729206 - L1PA16 LINE L1 -1 6165 6075 213 39 0 0 chr17 68710296 68710322 -16728158 + (TG)n Simple_repeat Simple_repeat 2 27 0 14583 177 28 36 chr17 68710427 68714112 -16724368 - L1MA4 LINE L1 -6 7713 4178 10126 70 51 5 chr17 68714112 68715425 -16723055 - SVA Other Other -1 1385 13 14583 177 28 36 chr17 68715425 68717013 -16721467 - L1MA4 LINE L1 -3541 4178 2579 13160 167 11 8 chr17 68717018 68720351 -16718129 - L1PA14 LINE L1 0 6161 2668 1294 269 52 27 chr17 68720352 68720643 -16717837 - L1M3b LINE L1 -4660 1621 1310 2502 66 0 0 chr17 68720643 68720946 -16717534 - AluY SINE Alu -8 303 1 1294 269 52 27 chr17 68720946 68721168 -16717312 - L1M3b LINE L1 -4971 1310 1095 606 339 74 30 chr17 68721610 68722082 -16716398 - L1M3b LINE L1 -5788 493 1 21 71 0 0 chr17 68723090 68723132 -16715348 + AT_rich Low_complexity Low_complexity 1 42 0 424 295 30 6 chr17 68723146 68723303 -16715177 + L1ME LINE L1 5480 5639 -482 320 279 0 0 chr17 68723404 68723483 -16714997 + L1 LINE L1 3758 3836 -2310 21 0 0 0 chr17 68723492 68723513 -16714967 + AT_rich Low_complexity Low_complexity 1 21 0 596 275 95 67 chr17 68723557 68723946 -16714534 - MLT1J LTR MaLR 0 511 112 1436 266 88 42 chr17 68724088 68724863 -16713617 - L2 LINE L2 -54 3259 2458 2154 151 41 31 chr17 68724869 68725410 -16713070 - MLT2A2 LTR ERVL 0 554 1 26 0 0 0 chr17 68726507 68726533 -16711947 + AT_rich Low_complexity Low_complexity 1 26 0 935 152 50 15 chr17 68726540 68726738 -16711742 - L1MB3 LINE L1 -46 6137 5933 627 137 59 0 chr17 68726739 68726841 -16711639 + MER1B DNA MER1_type 1 108 -189 605 191 70 0 chr17 68726830 68726945 -16711535 + MER1B DNA MER1_type 217 339 0 * 2517 151 18 16 chr17 68726945 68727395 -16711085 - L1MB3 LINE L1 -244 5939 5489 3228 231 121 12 chr17 68727711 68729400 -16709080 - L1ME1 LINE L1 -51 6115 4220 1190 226 77 16 chr17 68729606 68729929 -16708551 - MER2 DNA MER2_type -1 343 1 34 42 0 0 chr17 68730105 68730153 -16708327 + AT_rich Low_complexity Low_complexity 1 48 0 2425 100 0 0 chr17 68730370 68730680 -16707800 + AluSx SINE Alu 1 310 -2 381 70 0 0 chr17 68730680 68730737 -16707743 + (TA)n Simple_repeat Simple_repeat 2 58 0 191 301 103 37 chr17 68731715 68731851 -16706629 - L2 LINE L2 -10 3303 3159 2798 215 47 21 chr17 68732114 68732793 -16705687 - L1MC4a LINE L1 0 7808 7112 22 70 0 0 chr17 68735034 68735077 -16703403 + AT_rich Low_complexity Low_complexity 1 43 0 5516 231 62 19 chr17 68735311 68735731 -16702749 + L1M4 LINE L1 3526 3927 -2219 1429 86 0 5 chr17 68735731 68735929 -16702551 + L1PB1 LINE L1 5954 6150 -1 5516 231 62 19 chr17 68735929 68735952 -16702528 + L1M4 LINE L1 3927 3948 -2198 579 151 25 0 chr17 68735952 68736071 -16702409 + L1MB7 LINE L1 6063 6184 0 5516 231 62 19 chr17 68736071 68737333 -16701147 + L1M4 LINE L1 3948 5304 -842 442 231 0 10 chr17 68737373 68737477 -16701003 - Tigger6 DNA MER2_type -1474 123 21 250 254 428 0 chr17 68737658 68737831 -16700649 - MIR SINE MIR -3 259 13 228 284 81 14 chr17 68738007 68738081 -16700399 + MIR SINE MIR 41 119 -89 337 281 195 0 chr17 68738490 68738654 -16699826 - MIR SINE MIR -11 251 56 2447 80 0 0 chr17 68739919 68740218 -16698262 + AluY SINE Alu 1 299 -12 1596 309 128 25 chr17 68740631 68741519 -16696961 + L2 LINE L2 698 1677 -1637 315 212 0 15 chr17 68741564 68741630 -16696850 - MLT1I LTR MaLR -18 391 327 293 241 90 45 chr17 68741781 68741914 -16696566 - MLT1J LTR MaLR -266 245 107 1920 305 166 20 chr17 68741967 68743076 -16695404 + L2 LINE L2 1707 2977 -337 1838 161 104 27 chr17 68743085 68743330 -16695150 - MSTD LTR MaLR 0 396 171 1953 135 83 67 chr17 68743330 68743751 -16694729 - MSTA LTR MaLR 0 428 1 9612 129 22 35 chr17 68743751 68745349 -16693131 - MSTA-int LTR MaLR 0 1580 3 2047 126 139 13 chr17 68745351 68745731 -16692749 - MSTA LTR MaLR 0 428 1 1838 161 104 27 chr17 68745731 68745847 -16692633 - MSTD LTR MaLR -225 171 3 198 250 80 45 chr17 68745987 68746075 -16692405 + L2 LINE L2 3182 3272 0 21 0 0 0 chr17 68746216 68746237 -16692243 + AT_rich Low_complexity Low_complexity 1 21 0 1673 170 50 0 chr17 68747074 68747356 -16691124 + AluSx SINE Alu 1 296 -16 904 281 105 61 chr17 68748854 68749424 -16689056 - MLT1G1 LTR MaLR 0 595 1 180 413 107 8 chr17 68749430 68749551 -16688929 - L2 LINE L2 -15 3257 3125 352 355 50 9 chr17 68749708 68749928 -16688552 - L2 LINE L2 -961 2353 2125 362 214 0 0 chr17 68749956 68750026 -16688454 + L1MB7 LINE L1 5 74 -6468 * 2076 138 24 82 chr17 68750018 68750480 -16688000 + L1MB7 LINE L1 804 1238 -5304 655 243 77 0 chr17 68750476 68750645 -16687835 + L1MB7 LINE L1 1781 1962 -4684 * 3883 185 35 47 chr17 68750658 68750864 -16687616 + L1MB7 LINE L1 5502 5709 -973 1593 167 65 0 chr17 68750864 68751139 -16687341 + AluJb SINE Alu 1 293 -19 3883 185 35 47 chr17 68751139 68752101 -16686379 + L1MB7 LINE L1 5709 6661 -21 1570 162 0 73 chr17 68755132 68755471 -16683009 - AluJb SINE Alu 0 317 1 367 168 27 15 chr17 68755589 68755673 -16682807 - FRAM SINE Alu -64 102 46 2124 122 0 10 chr17 68756375 68756692 -16681788 - AluSx SINE Alu 0 312 1 437 279 191 23 chr17 68756720 68756935 -16681545 + MIR SINE MIR 7 257 -5 483 246 104 41 chr17 68756981 68757201 -16681279 + MIR SINE MIR 1 234 -28 536 248 16 16 chr17 68757203 68757328 -16681152 - L2 LINE L2 0 3313 3189 287 300 237 9 chr17 68757342 68757659 -16680821 - L2 LINE L2 -665 2649 2261 594 232 48 0 chr17 68758064 68758189 -16680291 + L2 LINE L2 3175 3305 -8 2155 62 18 0 chr17 68758710 68758986 -16679494 - L1PA11 LINE L1 -1 6173 5893 476 118 26 0 chr17 68758986 68759062 -16679418 + L1MC1 LINE L1 5754 5831 -502 180 284 75 99 chr17 68759070 68759271 -16679209 + L2 LINE L2 3095 3290 -23 261 253 42 21 chr17 68760778 68760873 -16677607 - MER5A DNA MER1_type 0 189 93 256 334 220 47 chr17 68762346 68763238 -16675242 - L2 LINE L2 -50 3222 2174 1710 297 84 21 chr17 68763389 68764744 -16673736 + L1M4 LINE L1 3179 4677 -1469 1789 159 7 10 chr17 68764744 68765033 -16673447 - AluJo SINE Alu -24 288 1 1710 297 84 21 chr17 68765033 68765211 -16673269 + L1M4 LINE L1 4677 4842 -1304 1723 186 6 6 chr17 68765346 68765658 -16672822 + AluJo SINE Alu 1 312 0 244 307 55 6 chr17 68765663 68765826 -16672654 + L1P5 LINE L1 5325 5495 -660 * 1926 196 38 14 chr17 68765815 68766320 -16672160 + L1MB7 LINE L1 4148 4664 -1482 1177 167 24 119 chr17 68766315 68766686 -16671794 + L1MB7 LINE L1 4903 5238 -908 * 3884 158 30 24 chr17 68766688 68767443 -16671037 + L1MB7 LINE L1 5425 6184 0 2107 122 3 0 chr17 68767453 68767747 -16670733 + AluSg SINE Alu 1 295 -15 276 250 242 24 chr17 68768223 68768347 -16670133 - MIR SINE MIR -110 152 2 2103 205 14 27 chr17 68768635 68769148 -16669332 - L1M4 LINE L1 -373 5801 5296 5734 94 36 15 chr17 68769247 68771065 -16667415 - L1PA16 LINE L1 -3 6163 4290 918 186 0 19 chr17 68773218 68773374 -16665106 - FRAM SINE Alu -20 156 4 180 77 0 0 chr17 68773941 68773967 -16664513 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 243 241 0 37 chr17 68773995 68774049 -16664431 - L2 LINE L2 -61 3252 3201 30 45 0 0 chr17 68774468 68774512 -16663968 + AT_rich Low_complexity Low_complexity 1 44 0 386 189 28 66 chr17 68774847 68774953 -16663527 - MLT1J LTR MaLR 0 511 410 743 227 76 11 chr17 68775083 68775268 -16663212 - MLT1J LTR MaLR -302 209 13 823 305 58 16 chr17 68775281 68775645 -16662835 + L1ME4a LINE L1 5410 5788 -333 2287 60 32 0 chr17 68775706 68775987 -16662493 + AluY SINE Alu 1 290 -21 2183 118 0 3 chr17 68776429 68776725 -16661755 + AluSx SINE Alu 2 296 -16 274 214 12 12 chr17 68776739 68776823 -16661657 + L1ME4a LINE L1 5813 5896 -225 2233 116 0 7 chr17 68778129 68778430 -16660050 - AluSx SINE Alu -13 299 1 377 225 49 5 chr17 68778659 68778779 -16659701 - L1ME1 LINE L1 -3 6181 6059 281 312 128 0 chr17 68779125 68779250 -16659230 + MIR SINE MIR 74 214 -48 183 156 0 0 chr17 68779306 68779338 -16659142 + (CAT)n Simple_repeat Simple_repeat 2 33 0 279 0 0 0 chr17 68779605 68779636 -16658844 + (TG)n Simple_repeat Simple_repeat 2 32 0 2079 249 74 62 chr17 68779636 68780179 -16658301 - L1MEc LINE L1 -2672 3543 3008 1651 180 3 27 chr17 68780179 68780479 -16658001 - AluJo SINE Alu -19 293 1 2079 249 74 62 chr17 68780479 68781263 -16657217 - L1MEc LINE L1 -3207 3008 2235 492 84 0 0 chr17 68781263 68781334 -16657146 - Alu SINE Alu -7 303 233 2079 249 74 62 chr17 68781334 68782050 -16656430 - L1MEc LINE L1 -3980 2235 1354 180 0 0 0 chr17 68782050 68782070 -16656410 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2079 249 74 62 chr17 68782070 68782225 -16656255 - L1MEc LINE L1 -4861 1354 1202 820 167 51 13 chr17 68782296 68782452 -16656028 + L1MCa LINE L1 21 182 -6244 * 11487 199 44 22 chr17 68782450 68783763 -16654717 - L1 LINE L1 -1156 6409 5127 2662 132 7 23 chr17 68783763 68784202 -16654278 + Tigger2a DNA MER2_type 3 434 0 11487 199 44 22 chr17 68784202 68785939 -16652541 - L1 LINE L1 -2438 5127 3295 417 101 0 15 chr17 68785948 68786026 -16652454 - L1 LINE L1 -4757 2729 2653 1444 88 70 0 chr17 68786126 68786341 -16652139 - L1P LINE L1 -2546 3600 3371 1327 173 31 0 chr17 68787598 68787852 -16650628 + L1PA16 LINE L1 5896 6157 -9 32 0 0 0 chr17 68787860 68787892 -16650588 + AT_rich Low_complexity Low_complexity 1 32 0 21 71 0 0 chr17 68788035 68788077 -16650403 + AT_rich Low_complexity Low_complexity 1 42 0 381 265 0 0 chr17 68789679 68789796 -16648684 + L1ME LINE L1 5706 5822 -299 257 200 15 46 chr17 68790657 68790722 -16647758 + MLT1I LTR MaLR 314 376 -33 240 163 116 0 chr17 68790690 68790733 -16647747 + MLT1J2 LTR MaLR 391 438 -12 * 463 236 45 32 chr17 68790754 68790911 -16647569 - MLT1K LTR MaLR -50 538 380 1962 293 174 24 chr17 68791063 68792295 -16646185 + L2 LINE L2 327 1743 -1571 2076 155 6 19 chr17 68792396 68792758 -16645722 + THE1C LTR MaLR 19 375 0 23 54 0 0 chr17 68792788 68792825 -16645655 + AT_rich Low_complexity Low_complexity 1 37 0 23 68 0 0 chr17 68793536 68793580 -16644900 + AT_rich Low_complexity Low_complexity 1 44 0 761 213 97 39 chr17 68794014 68794272 -16644208 + AluJo SINE Alu 40 312 0 454 274 11 86 chr17 68794277 68794463 -16644017 - MIR SINE MIR -77 185 14 390 308 7 53 chr17 68794489 68794675 -16643805 + MIR SINE MIR 16 190 -65 686 107 9 9 chr17 68795214 68795326 -16643154 + MSTB1 LTR MaLR 305 416 -16 1642 196 8 32 chr17 68795359 68795439 -16643041 - MSTB1-int LTR MaLR -1286 365 285 273 75 0 0 chr17 68795439 68795479 -16643001 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1642 196 8 32 chr17 68795479 68795771 -16642709 - MSTB1-int LTR MaLR -1366 285 2 2139 149 93 3 chr17 68795773 68796161 -16642319 - MSTB1 LTR MaLR -1 431 9 180 0 0 0 chr17 68797187 68797207 -16641273 + (CA)n Simple_repeat Simple_repeat 2 21 0 2294 100 0 0 chr17 68797315 68797615 -16640865 - AluSx SINE Alu -12 300 1 3657 129 13 5 chr17 68797768 68798372 -16640108 + L1P LINE L1 1870 2478 -3668 2503 84 3 0 chr17 68798370 68798713 -16639767 + L1P LINE L1 4889 5232 -914 * 6181 82 13 0 chr17 68798813 68799783 -16638697 + L1PA8A LINE L1 5128 6118 -13 26 0 0 0 chr17 68799783 68799809 -16638671 + AT_rich Low_complexity Low_complexity 1 26 0 311 400 29 19 chr17 68800486 68800691 -16637789 + L2 LINE L2 2428 2634 -680 213 324 27 14 chr17 68801621 68801695 -16636785 - MIR SINE MIR -164 98 24 300 188 69 7 chr17 68801861 68802027 -16636453 - LTR37B LTR ERV1 -3 423 271 29 47 0 0 chr17 68802027 68802070 -16636410 + AT_rich Low_complexity Low_complexity 1 43 0 1066 180 14 5 chr17 68802072 68802289 -16636191 - L1MA4 LINE L1 -14 6286 6068 26 74 0 0 chr17 68802508 68802562 -16635918 + AT_rich Low_complexity Low_complexity 1 54 0 237 203 31 0 chr17 68802821 68802885 -16635595 + A-rich Low_complexity Low_complexity 1 66 0 238 254 0 0 chr17 68804393 68804448 -16634032 + L1MC/D LINE L1 5821 5875 -484 30 27 0 0 chr17 68804490 68804527 -16633953 + AT_rich Low_complexity Low_complexity 1 37 0 399 219 63 11 chr17 68804865 68805017 -16633463 + MLT1A1 LTR MaLR 1 230 -135 279 244 115 13 chr17 68805221 68805377 -16633103 - L1MEd LINE L1 -5055 1064 893 24 0 0 0 chr17 68805402 68805426 -16633054 + AT_rich Low_complexity Low_complexity 1 24 0 1053 118 0 0 chr17 68805459 68805635 -16632845 - AluSq SINE Alu 0 316 141 4930 165 48 13 chr17 68805735 68807080 -16631400 + L1MA4 LINE L1 4904 6297 -3 1879 171 24 19 chr17 68809163 68809532 -16628948 + THE1C LTR MaLR 1 371 -4 7503 121 55 8 chr17 68809538 68810706 -16627774 + THE1C-int LTR MaLR 3 1225 -355 3942 28 0 7 chr17 68810806 68811269 -16627211 - L1PA5 LINE L1 -217 5937 5478 252 285 180 23 chr17 68811756 68811928 -16626552 + L2 LINE L2 2431 2629 -685 363 247 0 82 chr17 68815158 68815255 -16623225 - L2 LINE L2 -2 3311 3223 337 261 40 9 chr17 68815274 68815384 -16623096 - L1MC4 LINE L1 -1113 6696 6557 39 22 0 0 chr17 68815384 68815430 -16623050 + AT_rich Low_complexity Low_complexity 1 46 0 264 145 0 43 chr17 68815458 68815527 -16622953 + (TA)n Simple_repeat Simple_repeat 2 67 0 234 0 0 0 chr17 68815817 68815843 -16622637 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 755 238 139 4 chr17 68815843 68816124 -16622356 + LTR54B LTR ERV1 179 497 -1 735 267 82 21 chr17 68816136 68816552 -16621928 - L2 LINE L2 -121 3192 2743 1545 306 10 2 chr17 68817854 68818259 -16620221 - L1PA13 LINE L1 -6369 418 11 1594 173 7 21 chr17 68818280 68818600 -16619880 - AluJb SINE Alu 0 320 5 49 42 0 31 chr17 68818620 68818716 -16619764 + AT_rich Low_complexity Low_complexity 1 93 0 4884 77 21 1 chr17 68818788 68819461 -16619019 - L1PA8 LINE L1 -3 6169 5484 385 332 69 14 chr17 68819659 68819876 -16618604 + L1MC4a LINE L1 5357 5585 -577 339 214 87 19 chr17 68819946 68820049 -16618431 + L1MC4a LINE L1 5772 5881 -1927 508 58 26 79 chr17 68822663 68822853 -16615627 + (TA)n Simple_repeat Simple_repeat 1 180 0 264 363 0 0 chr17 68822993 68823095 -16615385 + MER89-int LTR ERV1 5224 5325 -1476 379 132 11 154 chr17 68823450 68823541 -16614939 + MER70-int LTR ERVL 2502 2579 -2444 380 111 0 0 chr17 68823548 68823602 -16614878 + MER70A LTR ERVL 419 472 0 21 0 0 0 chr17 68823624 68823645 -16614835 + AT_rich Low_complexity Low_complexity 1 21 0 264 229 0 29 chr17 68823813 68823883 -16614597 + MLT1K LTR MaLR 195 262 -326 303 329 24 55 chr17 68824511 68824675 -16613805 - MIR SINE MIR -48 214 56 230 368 21 0 chr17 68825197 68825292 -16613188 + Charlie8 DNA MER1_type 1 97 -2320 8530 169 86 43 chr17 68825577 68828012 -16610468 - L1MCa LINE L1 -3402 3024 513 1790 220 51 45 chr17 68828013 68828819 -16609661 - L1MEc LINE L1 -3465 3702 2897 3222 215 21 2 chr17 68828843 68829557 -16608923 - L1MEc LINE L1 -4839 2329 1584 913 194 23 11 chr17 68829555 68829730 -16608750 + L1MCa LINE L1 364 540 -5886 * 252 159 29 0 chr17 68829849 68829918 -16608562 + L1M4 LINE L1 3076 3146 -3000 666 182 45 23 chr17 68829924 68830056 -16608424 + FLAM_A SINE Alu 8 142 0 4619 247 28 9 chr17 68830062 68831330 -16607150 + L1M4 LINE L1 3132 4422 -1724 286 148 0 37 chr17 68831341 68831395 -16607085 + Tigger5 DNA MER2_type 4 55 -2268 396 253 0 0 chr17 68831405 68831492 -16606988 + Tigger5 DNA MER2_type 2237 2323 0 226 246 14 0 chr17 68831492 68831561 -16606919 + L1M4 LINE L1 4435 4504 -1642 266 246 27 9 chr17 68831578 68831688 -16606792 - L1MEc LINE L1 -6193 1155 1044 32 57 0 0 chr17 68831803 68831856 -16606624 + AT_rich Low_complexity Low_complexity 1 53 0 3963 91 9 2 chr17 68831908 68832458 -16606022 - MER41A LTR ERV1 0 554 1 249 119 0 0 chr17 68833111 68833153 -16605327 + (CTA)n Simple_repeat Simple_repeat 2 43 0 590 193 55 0 chr17 68833197 68833306 -16605174 + FLAM_A SINE Alu 1 115 -18 2972 257 150 51 chr17 68833752 68834065 -16604415 + L2 LINE L2 1196 1477 -1837 1376 161 87 56 chr17 68834065 68834443 -16604037 - MLT1B LTR MaLR 0 390 1 2972 257 150 51 chr17 68834443 68834890 -16603590 + L2 LINE L2 1477 1878 -1436 2236 99 0 7 chr17 68834890 68835192 -16603288 - AluSx SINE Alu -2 310 11 2972 257 150 51 chr17 68835192 68835838 -16602642 + L2 LINE L2 1878 2742 -572 1862 157 126 18 chr17 68835838 68836220 -16602260 + MSTA LTR MaLR 1 403 -23 1692 87 53 4 chr17 68836220 68836485 -16601995 - L1PA11 LINE L1 0 6174 5897 1862 157 126 18 chr17 68836485 68836512 -16601968 + MSTA LTR MaLR 403 426 0 821 252 85 64 chr17 68836512 68836671 -16601809 + L2 LINE L2 2737 2891 -422 1831 136 18 0 chr17 68836671 68836996 -16601484 - AluSx SINE Alu 0 330 1 821 252 85 64 chr17 68836996 68837343 -16601137 + L2 LINE L2 2891 3259 -54 274 239 0 14 chr17 68837542 68837613 -16600867 + MIR SINE MIR 187 256 -6 214 313 31 16 chr17 68838039 68838103 -16600377 - L2 LINE L2 -97 3175 3111 291 294 39 20 chr17 68838198 68838300 -16600180 + HAL1 LINE L1 3 106 -2401 613 248 0 8 chr17 68838300 68838429 -16600051 + MER5B DNA MER1_type 2 129 -49 554 247 252 35 chr17 68838629 68839148 -16599332 + HAL1 LINE L1 273 904 -1603 585 154 0 0 chr17 68839257 68839367 -16599113 + (TGGA)n Simple_repeat Simple_repeat 3 112 0 615 196 15 23 chr17 68839404 68839537 -16598943 + MIR SINE MIR 22 153 -109 784 238 93 30 chr17 68839547 68839976 -16598504 + HAL1 LINE L1 1043 1498 -1009 262 300 28 26 chr17 68840215 68840360 -16598120 + CT-rich Low_complexity Low_complexity 1 145 0 243 88 0 0 chr17 68840871 68840905 -16597575 + (CA)n Simple_repeat Simple_repeat 2 35 0 456 254 136 30 chr17 68841571 68841740 -16596740 - MIR SINE MIR -60 202 16 207 0 0 0 chr17 68841771 68841794 -16596686 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2201 87 0 7 chr17 68841805 68842091 -16596389 - AluY SINE Alu -27 284 1 802 284 52 13 chr17 68842527 68842759 -16595721 + MIR SINE MIR 21 261 -1 1977 98 0 4 chr17 68845122 68845388 -16593092 - AluSq SINE Alu 0 313 49 377 183 14 0 chr17 68845569 68845640 -16592840 + L1MD2 LINE L1 6079 6150 -209 198 325 135 8 chr17 68845826 68845952 -16592528 + MIR SINE MIR 58 199 -63 2154 88 25 0 chr17 68846773 68847096 -16591384 + AluSg SINE Alu 1 330 0 372 206 35 99 chr17 68847140 68847255 -16591225 + MIR SINE MIR 38 144 -118 2335 95 0 16 chr17 68847255 68847571 -16590909 + AluSq SINE Alu 1 311 -2 372 206 35 99 chr17 68847571 68847596 -16590884 + MIR SINE MIR 144 169 -93 26 30 0 0 chr17 68849835 68849868 -16588612 + AT_rich Low_complexity Low_complexity 1 33 0 792 276 15 34 chr17 68850134 68850398 -16588082 - MIR SINE MIR 0 262 4 272 204 0 80 chr17 68850901 68850989 -16587491 + L1ME4a LINE L1 5543 5623 -498 206 240 0 0 chr17 68851070 68851120 -16587360 - L2 LINE L2 0 3313 3264 230 224 158 31 chr17 68851170 68851398 -16587082 + L1ME4a LINE L1 5789 6045 -76 2398 89 0 0 chr17 68851641 68851934 -16586546 - AluSx SINE Alu -18 294 2 584 262 84 75 chr17 68852076 68852531 -16585949 - MLT1H LTR MaLR -34 515 1 500 242 104 26 chr17 68852718 68853413 -16585067 - HAL1b LINE L1 -15 1333 426 260 207 24 24 chr17 68853497 68853579 -16584901 - HAL1b LINE L1 -953 395 314 836 364 71 28 chr17 68854715 68855490 -16582990 + L2 LINE L2 2008 2815 -499 5359 174 40 93 chr17 68855494 68857030 -16581450 + Charlie1a DNA MER1_type 1 1454 -1 539 289 37 14 chr17 68857317 68857535 -16580945 - MER46C DNA MER2_type -115 223 1 198 268 0 0 chr17 68857549 68857590 -16580890 + L2 LINE L2 3136 3176 -96 14849 117 41 6 chr17 68857850 68860185 -16578295 + Tigger1 DNA MER2_type 1 2418 0 1286 139 0 20 chr17 68861432 68861679 -16576801 - AluJb SINE Alu 0 326 84 25 31 0 0 chr17 68861747 68861779 -16576701 + AT_rich Low_complexity Low_complexity 1 32 0 378 49 279 0 chr17 68861928 68861989 -16576491 + MADE1 DNA Mariner 1 78 -2 462 244 8 47 chr17 68862030 68862157 -16576323 + Tigger3(Golem) DNA MER2_type 1 122 -2907 * 2690 102 34 94 chr17 68862143 68862759 -16575721 + Tigger3(Golem) DNA MER2_type 2284 2862 -167 302 339 198 19 chr17 68863015 68863194 -16575286 + L2 LINE L2 1807 1952 -1362 1095 228 0 5 chr17 68863194 68863418 -16575062 - MER58A DNA MER1_type 0 224 2 302 339 198 19 chr17 68863418 68863994 -16574486 + L2 LINE L2 1952 2698 -616 446 332 41 38 chr17 68864044 68864411 -16574069 + L1ME4a LINE L1 5298 5665 -2143 268 192 45 23 chr17 68864461 68864570 -16573910 + L1ME4a LINE L1 5771 5814 -307 2032 109 51 0 chr17 68865040 68865316 -16573164 - AluSg SINE Alu -20 290 1 1810 108 108 51 chr17 68865447 68865781 -16572699 + THE1A LTR MaLR 1 353 -2 2044 116 7 4 chr17 68865781 68866057 -16572423 + AluSx SINE Alu 10 286 -26 23 0 0 0 chr17 68866087 68866110 -16572370 + AT_rich Low_complexity Low_complexity 1 23 0 2318 111 0 0 chr17 68868840 68869147 -16569333 + AluSx SINE Alu 1 307 -5 2457 77 3 0 chr17 68870081 68870379 -16568101 + AluY SINE Alu 3 301 -10 986 285 14 0 chr17 68870401 68870622 -16567858 + MIR SINE MIR 18 241 -21 331 317 245 29 chr17 68870741 68871771 -16566709 + L2 LINE L2 1802 3061 -211 2019 122 0 23 chr17 68871790 68872094 -16566386 - AluSx SINE Alu -13 299 3 2436 76 0 7 chr17 68872964 68873265 -16565215 - AluSq SINE Alu -14 299 1 2303 108 0 13 chr17 68874928 68875244 -16563236 + AluSx SINE Alu 1 312 0 188 288 164 0 chr17 68875290 68875363 -16563117 + L2 LINE L2 3188 3272 0 2345 82 0 3 chr17 68875638 68875932 -16562548 + AluY SINE Alu 1 293 -18 289 309 0 0 chr17 68877123 68877207 -16561273 + (TATATG)n Simple_repeat Simple_repeat 4 87 0 2467 66 0 7 chr17 68877501 68877803 -16560677 + AluY SINE Alu 1 300 -11 874 251 78 12 chr17 68879905 68880148 -16558332 - MIR SINE MIR 0 262 4 249 250 240 10 chr17 68881274 68881374 -16557106 - MER5A DNA MER1_type -1 188 66 2221 116 39 30 chr17 68881742 68882103 -16556377 + THE1B LTR MaLR 1 364 0 294 237 151 7 chr17 68882879 68883018 -16555462 + L1ME4a LINE L1 5956 6114 -7 729 290 159 6 chr17 68883763 68884097 -16554383 - L2 LINE L2 -406 2908 2524 1038 259 59 32 chr17 68885249 68885812 -16552668 - L1MC5 LINE L1 -30 7931 7354 318 26 0 0 chr17 68886929 68886968 -16551512 + (TG)n Simple_repeat Simple_repeat 2 40 0 2024 203 73 11 chr17 68887023 68887462 -16551018 - MLT1C LTR MaLR 0 467 2 2054 126 51 0 chr17 68887849 68888143 -16550337 - AluSg SINE Alu -1 309 1 1577 172 26 63 chr17 68888270 68888381 -16550099 - MER44D DNA MER2_type -1886 605 491 2783 88 16 14 chr17 68888381 68888744 -16549736 + THE1B LTR MaLR 1 364 0 1577 172 26 63 chr17 68888744 68888980 -16549500 - MER44D DNA MER2_type -2000 491 1 2107 97 80 0 chr17 68889213 68889502 -16548978 + AluSx SINE Alu 1 312 0 334 289 66 66 chr17 68889542 68889798 -16548682 - L2 LINE L2 -834 2480 2225 303 267 12 23 chr17 68889854 68889940 -16548540 + L2 LINE L2 2313 2397 -917 301 262 115 91 chr17 68890046 68890298 -16548182 + L2 LINE L2 2387 2644 -670 319 118 15 15 chr17 68891262 68891330 -16547150 + (GGA)n Simple_repeat Simple_repeat 2 69 0 1055 173 17 6 chr17 68891597 68891770 -16546710 + FAM SINE Alu 1 175 0 241 152 0 0 chr17 68894291 68894337 -16544143 + L1ME1 LINE L1 6121 6166 0 325 217 22 33 chr17 68894581 68894673 -16543807 - L1MC5 LINE L1 -29 7932 7842 1300 212 77 18 chr17 68897311 68897637 -16540843 - MLT1A1 LTR MaLR -1 364 20 250 266 0 51 chr17 68898520 68898599 -16539881 - L2 LINE L2 -5 3267 3193 2316 99 3 3 chr17 68898862 68899164 -16539316 + AluSg SINE Alu 1 302 -8 264 360 27 0 chr17 68899183 68899294 -16539186 + MIR SINE MIR 75 188 -74 295 364 27 16 chr17 68899398 68899585 -16538895 - L2 LINE L2 -497 2817 2629 225 267 0 17 chr17 68900007 68900067 -16538413 + Charlie4 DNA MER1_type 1903 1961 0 787 268 168 57 chr17 68900137 68900940 -16537540 + L2 LINE L2 2292 3207 -106 1909 160 16 20 chr17 68900940 68901246 -16537234 - AluJo SINE Alu -7 305 1 787 268 168 57 chr17 68901246 68901367 -16537113 + L2 LINE L2 3207 3313 0 2404 95 0 0 chr17 68902321 68902615 -16535865 + AluSq SINE Alu 1 294 -19 452 182 45 36 chr17 68902632 68902742 -16535738 - MLT1L LTR MaLR 0 615 505 309 252 243 50 chr17 68902790 68903107 -16535373 - MLT1L LTR MaLR -235 380 3 189 176 0 44 chr17 68903771 68903839 -16534641 + (TA)n Simple_repeat Simple_repeat 1 65 0 2415 82 0 3 chr17 68903923 68904228 -16534252 + AluSg SINE Alu 1 304 -6 501 273 60 84 chr17 68904230 68904479 -16534001 - MIR SINE MIR 0 262 20 189 0 0 0 chr17 68905254 68905275 -16533205 + (A)n Simple_repeat Simple_repeat 1 21 0 2359 81 34 0 chr17 68905426 68905721 -16532759 + AluSx SINE Alu 1 305 -7 296 275 94 36 chr17 68906501 68906639 -16531841 - MIR3 SINE MIR -30 178 33 199 356 78 22 chr17 68907187 68907277 -16531203 - L2 LINE L2 -40 3232 3138 2201 104 7 3 chr17 68907320 68907627 -16530853 - AluSg SINE Alu -2 308 1 404 324 43 16 chr17 68908329 68908514 -16529966 + MIR SINE MIR 44 233 -29 2266 123 0 0 chr17 68909097 68909405 -16529075 + AluSg SINE Alu 1 308 -2 1921 147 0 25 chr17 68909409 68909729 -16528751 + AluJb SINE Alu 1 312 0 206 340 95 43 chr17 68909828 68910154 -16528326 - L2 LINE L2 -958 2356 2014 2303 109 53 14 chr17 68910352 68910709 -16527771 + THE1C LTR MaLR 1 371 -4 242 237 118 13 chr17 68910789 68910865 -16527615 + L2 LINE L2 3170 3253 -19 271 294 0 0 chr17 68910869 68910937 -16527543 + GA-rich Low_complexity Low_complexity 2 69 0 378 0 0 0 chr17 68912217 68912259 -16526221 + (A)n Simple_repeat Simple_repeat 1 42 0 2215 120 0 3 chr17 68913450 68913758 -16524722 - AluSx SINE Alu -5 307 1 382 245 167 10 chr17 68914723 68914825 -16523655 - L2 LINE L2 -8 3264 3147 250 143 20 0 chr17 68914827 68914876 -16523604 - L1M4 LINE L1 -1475 4671 4622 333 249 38 80 chr17 68914878 68915039 -16523441 - L1M4 LINE L1 -1609 4537 4388 1894 126 55 17 chr17 68915039 68915332 -16523148 - AluSx SINE Alu -8 304 1 333 249 38 80 chr17 68915332 68915407 -16523073 - L1M4 LINE L1 -1758 4388 4311 * 1094 231 52 87 chr17 68915396 68915881 -16522599 - L1M4 LINE L1 -2127 4019 3552 1264 117 0 0 chr17 68915885 68916047 -16522433 + AluSq SINE Alu 3 164 -149 346 259 26 43 chr17 68916052 68916168 -16522312 - L1M4 LINE L1 -2592 3554 3441 338 259 134 34 chr17 68916240 68916591 -16521889 - L1MEd LINE L1 -5071 1134 792 300 269 105 93 chr17 68917140 68917218 -16521262 - L1M4 LINE L1 -797 5349 5273 2092 128 21 0 chr17 68917218 68917507 -16520973 + AluSx SINE Alu 1 295 -17 300 269 105 93 chr17 68917507 68917814 -16520666 - L1M4 LINE L1 -873 5273 4952 3102 191 20 41 chr17 68917814 68918453 -16520027 + MLT1E2 LTR MaLR 1 626 0 300 269 105 93 chr17 68918453 68918635 -16519845 - L1M4 LINE L1 -1194 4952 4774 809 271 17 38 chr17 68918651 68918891 -16519589 + MIR SINE MIR 14 248 -14 466 314 100 29 chr17 68918930 68919512 -16518968 - L1M4 LINE L1 -1456 4690 4068 199 329 14 29 chr17 68919602 68919672 -16518808 + L2 LINE L2 3116 3184 -88 366 202 18 9 chr17 68919682 68919791 -16518689 + (CATA)n Simple_repeat Simple_repeat 2 111 0 207 88 0 0 chr17 68921200 68921234 -16517246 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 373 271 110 17 chr17 68921294 68921412 -16517068 - L2 LINE L2 -3 3269 3141 2538 71 0 0 chr17 68921458 68921767 -16516713 - AluY SINE Alu -2 309 1 228 293 15 53 chr17 68921869 68922002 -16516478 + L2 LINE L2 2148 2275 -1039 2169 114 3 0 chr17 68923193 68923490 -16514990 + AluSx SINE Alu 1 298 -14 243 0 0 0 chr17 68923803 68923830 -16514650 + (TG)n Simple_repeat Simple_repeat 2 28 0 629 288 56 36 chr17 68925616 68925918 -16512562 - MLT1K LTR MaLR -46 542 235 1752 197 55 30 chr17 68926236 68926601 -16511879 + MLT1A2 LTR MaLR 1 374 0 223 262 0 78 chr17 68926689 68926792 -16511688 + L2 LINE L2 2442 2536 -778 290 321 79 0 chr17 68927092 68927232 -16511248 + L2 LINE L2 2900 3050 -222 2137 72 0 0 chr17 68927316 68927581 -16510899 - AluY SINE Alu -3 308 44 1481 135 0 0 chr17 68929203 68929410 -16509070 + AluJb SINE Alu 84 290 -22 186 208 0 0 chr17 68929421 68929469 -16509011 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 210 362 14 14 chr17 68929766 68929835 -16508645 - L2 LINE L2 -88 3184 3116 246 301 152 23 chr17 68929870 68930069 -16508411 + MIR SINE MIR 37 260 -2 1299 181 0 64 chr17 68930560 68930858 -16507622 + AluJb SINE Alu 34 312 0 949 162 12 9 chr17 68930862 68931211 -16507269 + GA-rich Low_complexity Low_complexity 1 350 0 207 343 69 39 chr17 68931212 68931580 -16506900 + L2 LINE L2 2709 3100 -172 763 44 0 0 chr17 68932347 68932437 -16506043 - AluSg/x SINE Alu -4 306 217 192 314 124 25 chr17 68932457 68932772 -16505708 + L2 LINE L2 1941 2286 -1028 249 240 58 123 chr17 68933221 68933375 -16505105 + MIR SINE MIR 111 254 -8 205 300 0 0 chr17 68933494 68933544 -16504936 - L2 LINE L2 -1 3271 3222 510 218 32 40 chr17 68934553 68934677 -16503803 - L2 LINE L2 -1 3312 3190 1358 193 9 5 chr17 68934679 68934902 -16503578 - MER58A DNA MER1_type 0 224 1 268 326 102 16 chr17 68934956 68935166 -16503314 - MLT1K LTR MaLR 0 588 321 2113 102 10 3 chr17 68937304 68937609 -16500871 - AluSc SINE Alu -2 307 1 1547 168 56 59 chr17 68938200 68938575 -16499905 + MLT1A2 LTR MaLR 1 374 0 22 35 0 0 chr17 68938645 68938674 -16499806 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr17 68938892 68938922 -16499558 + AT_rich Low_complexity Low_complexity 1 30 0 610 323 140 4 chr17 68938938 68939167 -16499313 - MIR SINE MIR 0 262 3 457 96 149 0 chr17 68939265 68939354 -16499126 - L1ME LINE L1 -659 5462 5362 1945 120 13 10 chr17 68939386 68939686 -16498794 + AluSx SINE Alu 1 301 -11 370 103 44 0 chr17 68939686 68939754 -16498726 + GA-rich Low_complexity Low_complexity 1 71 0 4852 100 3 9 chr17 68939754 68940447 -16498033 + L1PB1 LINE L1 5460 6148 -3 220 196 22 0 chr17 68940471 68940517 -16497963 + GA-rich Low_complexity Low_complexity 2 48 0 1560 85 12 61 chr17 68940528 68940775 -16497705 - AluSq SINE Alu -78 235 1 186 309 95 12 chr17 68941341 68941425 -16497055 - L2 LINE L2 -460 2854 2764 199 232 0 134 chr17 68941468 68941550 -16496930 - L2 LINE L2 -692 2622 2552 1851 156 3 7 chr17 68941653 68941954 -16496526 - AluJo SINE Alu -12 300 1 429 76 0 0 chr17 68942269 68942335 -16496145 + (TG)n Simple_repeat Simple_repeat 2 67 0 2058 109 0 0 chr17 68942335 68942620 -16495860 - AluSx SINE Alu -27 285 1 23 33 0 0 chr17 68943343 68943373 -16495107 + AT_rich Low_complexity Low_complexity 1 30 0 1871 136 0 32 chr17 68943606 68943916 -16494564 + AluJb SINE Alu 1 300 -12 2328 85 3 0 chr17 68943916 68944221 -16494259 + AluSp SINE Alu 1 306 -7 277 320 47 5 chr17 68944704 68944870 -16493610 + MIR SINE MIR 1 252 -10 218 171 0 0 chr17 68944839 68944874 -16493606 + L2 LINE L2 3226 3260 -12 * 743 183 0 0 chr17 68946025 68946145 -16492335 + FLAM_A SINE Alu 5 124 -9 703 263 33 61 chr17 68946153 68946545 -16491935 + HAL1b LINE L1 84 464 -884 531 169 0 0 chr17 68946551 68946628 -16491852 - FRAM/FAM SINE Alu -105 71 1 408 240 0 10 chr17 68946636 68946732 -16491748 + HAL1b LINE L1 462 556 -792 1955 131 0 10 chr17 68947790 68948088 -16490392 + AluSx SINE Alu 3 297 -15 1550 138 67 0 chr17 68949651 68949904 -16488576 - AluJb SINE Alu -38 274 5 2085 120 7 0 chr17 68950935 68951234 -16487246 + AluSx SINE Alu 1 301 -11 2270 97 0 3 chr17 68951251 68951560 -16486920 + AluSx SINE Alu 1 308 -4 1706 138 37 30 chr17 68951686 68951984 -16486496 - AluSx SINE Alu -12 300 1 278 204 239 26 chr17 68952003 68952116 -16486364 + L2 LINE L2 3177 3313 0 468 278 141 26 chr17 68953261 68953452 -16485028 - MIR SINE MIR -40 222 10 192 77 0 0 chr17 68953524 68953550 -16484930 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 2237 116 0 0 chr17 68954478 68954789 -16483691 + AluSx SINE Alu 2 312 0 1929 122 10 16 chr17 68958739 68959042 -16479438 + AluSg SINE Alu 1 301 -9 2072 92 7 0 chr17 68959266 68959579 -16478901 - AluSp SINE Alu 0 315 1 2053 108 6 29 chr17 68959687 68960001 -16478479 - AluSx SINE Alu -5 307 1 282 250 28 0 chr17 68960228 68960300 -16478180 + MIR SINE MIR 76 149 -59 247 224 0 0 chr17 68960488 68960537 -16477943 - L2 LINE L2 0 3272 3224 400 236 158 25 chr17 68960537 68960740 -16477740 - MLT1F LTR MaLR -22 520 291 2320 93 3 0 chr17 68960982 68961294 -16477186 - AluSq SINE Alu 0 313 1 1999 115 3 13 chr17 68962117 68962421 -16476059 + AluSx SINE Alu 1 301 -11 434 182 20 0 chr17 68962422 68962521 -16475959 + GA-rich Low_complexity Low_complexity 1 101 0 189 346 32 107 chr17 68963604 68963942 -16474538 - L2 LINE L2 -8 3264 2952 196 270 62 112 chr17 68964119 68964181 -16474299 + MIR SINE MIR 91 155 -107 2127 132 0 0 chr17 68964181 68964491 -16473989 + AluSx SINE Alu 1 310 -2 196 270 62 112 chr17 68964491 68964606 -16473874 + MIR SINE MIR 155 259 -3 2227 98 0 7 chr17 68964919 68965225 -16473255 - AluSx SINE Alu -7 305 2 2029 128 14 60 chr17 68965245 68965598 -16472882 - MER1B DNA MER1_type 0 337 1 2255 90 0 0 chr17 68966095 68966394 -16472086 - AluSg SINE Alu -5 305 7 2348 140 18 61 chr17 68967175 68967250 -16471230 - MSTA LTR MaLR 0 428 351 2108 72 21 24 chr17 68967250 68967541 -16470939 + AluY SINE Alu 5 294 -17 2348 140 18 61 chr17 68967541 68967803 -16470677 - MSTA LTR MaLR -77 351 112 1899 172 0 3 chr17 68967803 68968111 -16470369 + AluJb SINE Alu 1 307 -5 2348 140 18 61 chr17 68968111 68968216 -16470264 - MSTA LTR MaLR -316 112 4 2180 89 0 17 chr17 68968262 68968564 -16469916 + AluSq SINE Alu 1 297 -16 185 320 29 78 chr17 68969928 68970031 -16468449 + MIR SINE MIR 55 152 -110 1930 139 0 13 chr17 68970101 68970403 -16468077 - AluSx SINE Alu -14 298 1 2950 96 31 25 chr17 68970550 68970659 -16467821 - L1PB1 LINE L1 -4 6147 6040 2269 82 3 0 chr17 68970659 68970951 -16467529 - AluSg SINE Alu -17 293 1 2950 96 31 25 chr17 68970951 68971287 -16467193 - L1PB1 LINE L1 -111 6040 5699 1580 162 8 0 chr17 68971287 68971553 -16466927 - AluSx SINE Alu -44 268 1 1002 163 11 0 chr17 68972100 68972278 -16466202 - AluSg/x SINE Alu 0 312 133 276 30 0 0 chr17 68972278 68972311 -16466169 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1848 141 0 3 chr17 68972312 68972595 -16465885 - AluSx SINE Alu -30 282 1 2347 97 0 0 chr17 68973016 68973327 -16465153 + AluSx SINE Alu 1 311 -1 2420 111 37 0 chr17 68973872 68974223 -16464257 + THE1B LTR MaLR 1 364 0 2300 87 0 0 chr17 68974519 68974819 -16463661 + AluSq SINE Alu 1 300 -13 1781 150 7 17 chr17 68974833 68975133 -16463347 + AluJb SINE Alu 1 297 -15 221 212 121 15 chr17 68975176 68975242 -16463238 - L2 LINE L2 -50 3222 3150 2253 88 0 0 chr17 68975927 68976222 -16462258 + AluSc SINE Alu 1 295 -14 856 235 87 0 chr17 68976474 68976670 -16461810 - MER58A DNA MER1_type -2 222 10 1931 105 35 0 chr17 68976709 68976994 -16461486 - AluSp SINE Alu -18 295 1 1078 290 56 35 chr17 68977183 68977540 -16460940 - L3 LINE CR1 -119 1458 1091 2303 78 3 0 chr17 68977540 68977835 -16460645 + AluSq SINE Alu 1 296 -17 1078 290 56 35 chr17 68977835 68977873 -16460607 - L3 LINE CR1 -486 1091 1055 301 310 231 47 chr17 68977853 68978184 -16460296 + L2 LINE L2 1729 1998 -1316 * 1982 113 40 7 chr17 68978184 68978486 -16459994 - AluSx SINE Alu 0 312 1 301 310 231 47 chr17 68978486 68978961 -16459519 + L2 LINE L2 1998 2683 -631 259 257 200 9 chr17 68979137 68979242 -16459238 + L2 LINE L2 3121 3245 -27 510 286 183 48 chr17 68979371 68979682 -16458798 + L2 LINE L2 2920 3272 0 2142 107 3 0 chr17 68979699 68979997 -16458483 - AluSx SINE Alu -13 299 1 223 355 0 0 chr17 68980002 68980078 -16458402 - L3 LINE CR1 -549 1028 953 332 351 8 30 chr17 68980656 68980787 -16457693 - MIR3 SINE MIR -67 141 14 1706 156 222 11 chr17 68980800 68981152 -16457328 + MSTB LTR MaLR 1 426 0 1845 142 3 31 chr17 68982350 68982668 -16455812 - AluJb SINE Alu -3 309 1 211 265 82 41 chr17 68982768 68982866 -16455614 - MIR SINE MIR -56 206 105 616 224 59 12 chr17 68982939 68983109 -16455371 + MER5B DNA MER1_type 1 178 0 2143 87 3 53 chr17 68983140 68983461 -16455019 - AluSq SINE Alu -8 305 1 340 281 123 7 chr17 68984445 68984591 -16453889 + MIR SINE MIR 4 166 -96 2124 96 0 0 chr17 68984983 68985287 -16453193 - AluSg SINE Alu 0 304 1 344 179 0 0 chr17 68985666 68985722 -16452758 + MSTD LTR MaLR 5 60 -336 554 292 10 20 chr17 68986299 68986367 -16452113 - L2 LINE L2 -798 2516 2449 2254 93 7 0 chr17 68986367 68986677 -16451803 + AluSx SINE Alu 1 312 0 554 292 10 20 chr17 68986677 68986803 -16451677 - L2 LINE L2 -865 2449 2324 389 279 9 9 chr17 68987257 68987368 -16451112 - MIR3 SINE MIR -43 165 55 2467 151 15 18 chr17 68987371 68987768 -16450712 + MSTD LTR MaLR 1 396 0 261 0 0 0 chr17 68987866 68987895 -16450585 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2148 98 0 33 chr17 68988208 68988514 -16449966 + AluSg SINE Alu 1 296 -14 2213 96 3 26 chr17 68988514 68988827 -16449653 + AluSc SINE Alu 1 306 -3 1388 243 6 7 chr17 68988941 68989277 -16449203 - L1MC/D LINE L1 -435 5727 5398 203 325 12 12 chr17 68989647 68989730 -16448750 - MIR SINE MIR -88 120 38 444 283 8 0 chr17 68991762 68991882 -16446598 - MIR3 SINE MIR -14 194 74 310 265 0 15 chr17 68991984 68992052 -16446428 + L2 LINE L2 3206 3272 0 2074 98 28 0 chr17 68992791 68993078 -16445402 - AluSq SINE Alu -18 295 1 281 292 150 0 chr17 68993174 68993287 -16445193 - L2 LINE L2 -13 3300 3171 2244 73 7 0 chr17 68993337 68993626 -16444854 + AluSp SINE Alu 1 291 -22 336 295 47 47 chr17 68993706 68993835 -16444645 - MIR SINE MIR -88 174 46 2040 121 6 19 chr17 68994638 68994952 -16443528 + AluSx SINE Alu 1 310 -2 1750 124 0 57 chr17 68995224 68995555 -16442925 - AluSx SINE Alu 0 314 1 21 36 0 0 chr17 68996782 68996810 -16441670 + AT_rich Low_complexity Low_complexity 1 28 0 221 279 29 0 chr17 68997127 68997195 -16441285 + CT-rich Low_complexity Low_complexity 2 71 0 186 373 51 34 chr17 68998503 68998621 -16439859 - MIR SINE MIR -55 153 34 543 189 90 41 chr17 68999423 68999545 -16438935 + FLAM_C SINE Alu 8 135 -8 1512 163 18 18 chr17 68999580 68999862 -16438618 - AluJo SINE Alu -30 282 1 2045 154 0 0 chr17 68999871 69000183 -16438297 - AluSx SINE Alu 0 312 1 2450 74 0 0 chr17 69000558 69000868 -16437612 + AluSg SINE Alu 1 310 0 986 164 0 22 chr17 69001031 69001214 -16437266 + FRAM SINE Alu 1 175 -1 1943 100 8 0 chr17 69001310 69001571 -16436909 - AluSx SINE Alu -19 293 31 337 325 8 16 chr17 69001902 69002028 -16436452 + MIR SINE MIR 4 128 -134 180 309 64 64 chr17 69002059 69002153 -16436327 - L2 LINE L2 -29 3284 3191 641 295 85 11 chr17 69003793 69004074 -16434406 + LTR16C LTR ERVL 190 491 0 279 329 152 22 chr17 69004112 69004678 -16433802 + L2 LINE L2 2603 3244 -28 1831 170 40 43 chr17 69004736 69004893 -16433587 + MLT1A2 LTR MaLR 1 157 -217 2163 103 0 16 chr17 69004893 69005203 -16433277 + AluSq SINE Alu 1 305 -8 1831 170 40 43 chr17 69005203 69005416 -16433064 + MLT1A2 LTR MaLR 157 370 -4 274 267 0 0 chr17 69007660 69007720 -16430760 - MIR SINE MIR -113 149 90 2026 114 0 40 chr17 69007723 69008047 -16430433 + AluSx SINE Alu 1 311 -1 1842 125 25 4 chr17 69008075 69008355 -16430125 - AluJb SINE Alu -18 294 9 2203 86 0 7 chr17 69008513 69008805 -16429675 + AluSg SINE Alu 1 290 -20 183 246 0 0 chr17 69009261 69009318 -16429162 + (TG)n Simple_repeat Simple_repeat 2 58 0 186 43 0 0 chr17 69009318 69009341 -16429139 + (GA)n Simple_repeat Simple_repeat 1 23 0 2021 122 7 0 chr17 69009341 69009636 -16428844 + AluSx SINE Alu 2 298 -14 183 42 0 0 chr17 69009636 69009660 -16428820 + (GA)n Simple_repeat Simple_repeat 2 25 0 1362 183 3 99 chr17 69010026 69010179 -16428301 + AluJo SINE Alu 1 106 -206 2173 104 16 0 chr17 69010179 69010486 -16427994 + AluSq SINE Alu 1 312 -1 1362 183 3 99 chr17 69010486 69010666 -16427814 + AluJo SINE Alu 106 302 -10 2127 118 3 3 chr17 69011292 69011596 -16426884 - AluSx SINE Alu -8 304 1 325 268 120 14 chr17 69011626 69011768 -16426712 - L1ME4a LINE L1 -200 5921 5765 199 321 168 15 chr17 69012273 69012404 -16426076 - MIR3 SINE MIR -53 155 5 447 19 0 0 chr17 69012850 69012902 -16425578 + (TA)n Simple_repeat Simple_repeat 2 53 0 2001 133 0 13 chr17 69012918 69013226 -16425254 - AluSx SINE Alu -8 304 1 284 125 0 0 chr17 69013305 69013345 -16425135 - Alu SINE Alu -268 40 1 253 191 0 0 chr17 69013312 69013359 -16425121 - AluSp SINE Alu -135 168 122 * 185 289 9 61 chr17 69013623 69013699 -16424781 + MIR SINE MIR 43 113 -149 957 203 6 0 chr17 69013699 69013876 -16424604 + MER45A DNA AcHobo 1 178 0 185 289 9 61 chr17 69013876 69013913 -16424567 + MIR SINE MIR 113 150 -112 2206 109 3 0 chr17 69014621 69014924 -16423556 - AluSq SINE Alu -9 304 1 2322 81 3 0 chr17 69014995 69015292 -16423188 + AluSp SINE Alu 1 298 -15 374 311 20 46 chr17 69015331 69015482 -16422998 - MIR SINE MIR -90 172 26 2312 84 7 3 chr17 69015523 69015833 -16422647 - AluY SINE Alu 0 311 1 2129 76 7 7 chr17 69015957 69016247 -16422233 + AluY SINE Alu 22 311 0 2277 106 0 0 chr17 69016446 69016748 -16421732 + AluSq SINE Alu 1 302 -11 1931 120 47 3 chr17 69017348 69017647 -16420833 - AluSx SINE Alu 0 312 1 309 275 12 0 chr17 69017658 69017738 -16420742 - MIR SINE MIR -71 191 111 1813 127 0 80 chr17 69019140 69019328 -16419152 - AluJb SINE Alu 0 312 161 1306 66 12 0 chr17 69019328 69019494 -16418986 - L1PA10 LINE L1 -3 6165 5998 1813 127 0 80 chr17 69019494 69019644 -16418836 - AluJb SINE Alu -151 161 1 2273 66 3 7 chr17 69019812 69020115 -16418365 - AluY SINE Alu -9 302 1 1912 127 0 7 chr17 69020768 69021072 -16417408 - AluSq SINE Alu 0 302 1 1942 146 3 3 chr17 69021156 69021465 -16417015 + AluSx SINE Alu 1 309 -3 424 300 27 13 chr17 69021594 69021744 -16416736 - MLT1E LTR MaLR -81 512 361 480 267 31 30 chr17 69021791 69021987 -16416493 - MLT1E LTR MaLR -353 189 1 238 260 0 0 chr17 69022162 69022212 -16416268 - L2 LINE L2 -86 3186 3137 2100 124 0 9 chr17 69022420 69022735 -16415745 + AluSq SINE Alu 1 312 -1 2085 88 14 14 chr17 69023107 69023404 -16415076 - AluSg SINE Alu -11 299 3 1870 126 3 35 chr17 69023684 69023994 -16414486 + AluSg SINE Alu 1 300 -10 24 0 0 0 chr17 69024009 69024033 -16414447 + AT_rich Low_complexity Low_complexity 1 24 0 2148 114 3 0 chr17 69024326 69024625 -16413855 - AluSx SINE Alu -12 300 1 256 231 64 127 chr17 69025043 69025157 -16413323 + MIR3 SINE MIR 15 118 -90 2126 102 0 0 chr17 69025157 69025467 -16413013 - AluSq SINE Alu 0 310 1 256 231 64 127 chr17 69025467 69025523 -16412957 + MIR3 SINE MIR 118 176 -32 253 314 129 8 chr17 69025749 69025873 -16412607 - MIR SINE MIR -27 235 97 2239 92 7 3 chr17 69026628 69026934 -16411546 - AluSp SINE Alu -6 307 1 450 0 0 0 chr17 69027247 69027297 -16411183 + (TG)n Simple_repeat Simple_repeat 1 50 0 1862 113 88 0 chr17 69027913 69028197 -16410283 - AluSx SINE Alu -3 309 1 2110 94 7 26 chr17 69028412 69028720 -16409760 - AluSx SINE Alu -10 302 1 251 27 0 27 chr17 69029665 69029702 -16408778 + (CGGGG)n Simple_repeat Simple_repeat 4 39 0 23 33 0 0 chr17 69029714 69029744 -16408736 + GC_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr17 69029889 69029920 -16408560 + GC_rich Low_complexity Low_complexity 1 31 0 364 170 7 68 chr17 69029996 69030143 -16408337 + (CGGGG)n Simple_repeat Simple_repeat 2 139 0 21 36 0 0 chr17 69030284 69030312 -16408168 + GC_rich Low_complexity Low_complexity 1 28 0 48 43 0 0 chr17 69030443 69030512 -16407968 + GC_rich Low_complexity Low_complexity 1 69 0 187 197 0 40 chr17 69030949 69031025 -16407455 + C-rich Low_complexity Low_complexity 4 76 0 24 53 0 0 chr17 69031127 69031165 -16407315 + GC_rich Low_complexity Low_complexity 1 38 0 21 71 0 0 chr17 69031252 69031294 -16407186 + GC_rich Low_complexity Low_complexity 1 42 0 348 330 6 28 chr17 69236546 69236728 -16201752 + MER5B DNA MER1_type 1 178 0 2143 129 0 0 chr17 69236877 69237172 -16201308 - AluSx SINE Alu -17 295 1 437 219 133 0 chr17 69237207 69237312 -16201168 + FLAM_A SINE Alu 2 120 -13 207 111 0 28 chr17 69237315 69237351 -16201129 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 506 290 36 24 chr17 69237430 69237678 -16200802 + MARNA DNA Mariner 183 433 -153 2218 97 3 20 chr17 69238572 69238872 -16199608 - AluSq SINE Alu -10 303 9 957 207 161 84 chr17 69239553 69239920 -16198560 - MSTD LTR MaLR -1 395 1 1795 163 3 10 chr17 69240113 69240414 -16198066 + AluJb SINE Alu 1 299 -13 1961 112 0 62 chr17 69240822 69241187 -16197293 - AluSq SINE Alu 0 346 1 210 37 0 0 chr17 69241946 69241973 -16196507 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 2074 154 0 0 chr17 69242751 69243057 -16195423 + AluJo SINE Alu 5 310 -2 435 137 0 0 chr17 69244732 69244805 -16193675 + (CA)n Simple_repeat Simple_repeat 2 74 0 2389 96 0 13 chr17 69245221 69245533 -16192947 - AluSg SINE Alu -2 308 1 3424 191 28 34 chr17 69245550 69246909 -16191571 - L1MC1 LINE L1 0 6333 5016 1717 164 3 39 chr17 69247291 69247603 -16190877 - AluJo SINE Alu -11 301 1 281 147 0 18 chr17 69248144 69248201 -16190279 - Alu SINE Alu -263 39 1 267 221 69 23 chr17 69248290 69248421 -16190059 - L1ME4a LINE L1 -18 6103 5967 6078 91 34 0 chr17 69248539 69249643 -16188837 + L1PA13 LINE L1 5026 6163 0 229 291 0 0 chr17 69250903 69250958 -16187522 + L2 LINE L2 3208 3262 -10 183 306 12 24 chr17 69251100 69251185 -16187295 + L2 LINE L2 1970 2053 -1261 849 110 0 0 chr17 69251450 69251559 -16186921 + AluSg SINE Alu 1 109 -201 252 86 0 0 chr17 69251660 69251695 -16186785 + (A)n Simple_repeat Simple_repeat 1 35 0 2278 154 53 72 chr17 69252723 69253008 -16185472 - MLT1C LTR MaLR 0 467 178 1919 111 25 7 chr17 69253008 69253321 -16185159 - AluY SINE Alu 0 318 1 2278 154 53 72 chr17 69253321 69253492 -16184988 - MLT1C LTR MaLR -289 178 17 2035 138 52 35 chr17 69253492 69253861 -16184619 - THE1C LTR MaLR 0 375 1 2278 154 53 72 chr17 69253861 69253876 -16184604 - MLT1C LTR MaLR -450 17 3 385 239 31 59 chr17 69254188 69254410 -16184070 - L1MC5 LINE L1 -17 7944 7729 388 285 51 29 chr17 69254629 69254766 -16183714 + L2 LINE L2 3133 3272 0 372 80 0 0 chr17 69256437 69256487 -16181993 + L1MA4 LINE L1 6237 6286 -14 5118 159 93 2 chr17 69256487 69257561 -16180919 - L1MA4 LINE L1 -65 6235 5061 353 252 146 0 chr17 69257986 69258109 -16180371 + L2 LINE L2 2412 2552 -762 414 0 0 0 chr17 69258876 69258922 -16179558 + (TA)n Simple_repeat Simple_repeat 2 47 0 235 93 0 56 chr17 69259227 69259281 -16179199 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 2236 136 0 0 chr17 69259298 69259606 -16178874 - AluSx SINE Alu -4 308 1 629 131 10 0 chr17 69259771 69259870 -16178610 - L1MB4 LINE L1 -28 6152 6053 1723 96 0 9 chr17 69259871 69260100 -16178380 - AluSq SINE Alu -15 298 72 2168 121 0 16 chr17 69260100 69260406 -16178074 - AluSx SINE Alu -11 301 1 234 260 39 0 chr17 69263890 69263967 -16174513 - MER5B DNA MER1_type -6 172 93 653 283 29 33 chr17 69264000 69264240 -16174240 + MIR SINE MIR 20 258 -4 290 278 45 91 chr17 69264639 69264837 -16173643 + MIR3 SINE MIR 4 192 -16 409 271 8 0 chr17 69265285 69265403 -16173077 - L2 LINE L2 -6 3307 3189 855 270 62 31 chr17 69265594 69265883 -16172597 + MLT1H LTR MaLR 13 310 -239 25 31 0 0 chr17 69266566 69266598 -16171882 + AT_rich Low_complexity Low_complexity 1 32 0 257 167 33 17 chr17 69266975 69267035 -16171445 - MLT1G1 LTR MaLR -12 583 523 613 284 15 58 chr17 69267189 69267450 -16171030 - MLT1H LTR MaLR -277 272 23 630 261 85 24 chr17 69267609 69267820 -16170660 + MER58A DNA MER1_type 1 224 0 2079 97 0 73 chr17 69268588 69268917 -16169563 + AluSx SINE Alu 1 305 -7 1967 189 107 13 chr17 69268973 69269433 -16169047 + MLT1D LTR MaLR 1 503 -2 312 292 58 11 chr17 69270794 69270943 -16167537 - MIR SINE MIR -63 145 9 1537 227 48 101 chr17 69272682 69272713 -16165767 - MLT2B1 LTR ERVL -2 518 487 411 21 0 0 chr17 69272713 69272761 -16165719 + (TG)n Simple_repeat Simple_repeat 2 49 0 1537 227 48 101 chr17 69272761 69273276 -16165204 - MLT2B1 LTR ERVL -33 487 1 363 250 12 0 chr17 69273372 69273456 -16165024 + L2 LINE L2 3188 3272 0 1584 55 0 30 chr17 69273523 69273725 -16164755 - MER107 DNA MER1_type 0 197 2 1706 152 0 4 chr17 69274298 69274561 -16163919 - AluJb SINE Alu -13 299 38 2241 121 0 0 chr17 69275235 69275532 -16162948 - AluSx SINE Alu -15 297 1 321 203 58 109 chr17 69275620 69275758 -16162722 + L2 LINE L2 2619 2749 -565 2296 92 7 0 chr17 69276073 69276367 -16162113 + AluSp SINE Alu 1 296 -17 189 368 48 16 chr17 69276847 69276972 -16161508 - MIR3 SINE MIR -11 197 69 244 274 60 43 chr17 69277378 69277495 -16160985 - L2 LINE L2 -20 3293 3175 238 250 0 0 chr17 69277607 69277651 -16160829 + (CGTG)n Simple_repeat Simple_repeat 4 47 0 187 302 0 0 chr17 69277669 69277732 -16160748 - L2 LINE L2 -298 2974 2912 355 188 25 38 chr17 69277828 69277908 -16160572 - MLT1A1 LTR MaLR -279 86 8 323 218 52 86 chr17 69278025 69278199 -16160281 - L2 LINE L2 -1120 2194 2027 1059 209 11 69 chr17 69278791 69279068 -16159412 + MLT1A1 LTR MaLR 8 268 -97 189 265 48 60 chr17 69279343 69279426 -16159054 - MIR3 SINE MIR -9 199 118 23 0 0 0 chr17 69279795 69279818 -16158662 + AT_rich Low_complexity Low_complexity 1 23 0 2354 102 0 7 chr17 69281091 69281395 -16157085 - AluSx SINE Alu -10 302 1 2319 77 3 17 chr17 69281521 69281818 -16156662 - AluY SINE Alu -17 294 2 412 328 119 34 chr17 69282907 69283076 -16155404 + L2 LINE L2 2904 3057 -256 1908 126 0 0 chr17 69283076 69283337 -16155143 - AluSx SINE Alu -51 261 1 412 328 119 34 chr17 69283337 69283545 -16154935 + L2 LINE L2 3057 3313 0 25 0 0 0 chr17 69283765 69283790 -16154690 + AT_rich Low_complexity Low_complexity 1 25 0 315 222 157 0 chr17 69284020 69284128 -16154352 + L1ME4a LINE L1 5759 5883 -238 1579 109 19 23 chr17 69284356 69284612 -16153868 + Tigger7 DNA MER2_type 2229 2483 -4 328 306 61 65 chr17 69284802 69285203 -16153277 - MLT1J LTR MaLR -17 587 197 2203 88 0 60 chr17 69285318 69285637 -16152843 + AluSc SINE Alu 1 300 -9 1634 158 3 33 chr17 69285885 69286188 -16152292 - AluJo SINE Alu -17 295 2 188 354 115 48 chr17 69286454 69286695 -16151785 + L3 LINE CR1 974 1256 -321 2118 115 0 0 chr17 69286695 69286990 -16151490 + AluSx SINE Alu 1 295 -17 188 354 115 48 chr17 69286990 69287166 -16151314 + L3 LINE CR1 1256 1419 -158 2267 74 0 0 chr17 69287357 69287640 -16150840 + AluSc SINE Alu 10 292 -17 330 305 103 17 chr17 69287742 69287916 -16150564 + L2 LINE L2 3076 3264 -8 279 301 120 15 chr17 69289977 69290110 -16148370 + MIR SINE MIR 95 241 -21 512 241 127 0 chr17 69290149 69290315 -16148165 + MER5A DNA MER1_type 1 187 -2 227 30 0 30 chr17 69290488 69290521 -16147959 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 258 219 0 0 chr17 69290522 69290563 -16147917 - AluJ/FRAM SINE Alu -46 256 216 2107 112 20 0 chr17 69290588 69290883 -16147597 - AluSx SINE Alu -11 301 1 833 104 24 8 chr17 69290889 69291014 -16147466 - AluJo SINE Alu -174 138 12 201 100 50 0 chr17 69291916 69291956 -16146524 + (CA)n Simple_repeat Simple_repeat 2 43 0 296 27 0 0 chr17 69292100 69292137 -16146343 - tRNA-Cys-TGC tRNA tRNA -38 37 1 1874 133 0 43 chr17 69292780 69293104 -16145376 - AluJb SINE Alu -2 310 1 222 105 0 0 chr17 69293224 69293262 -16145218 + (CA)n Simple_repeat Simple_repeat 2 39 0 1574 167 7 14 chr17 69295982 69296299 -16142181 + AluJo SINE Alu 1 315 0 202 26 79 26 chr17 69296833 69296871 -16141609 + T-rich Low_complexity Low_complexity 1 40 0 184 321 0 0 chr17 69297060 69297116 -16141364 + MIR SINE MIR 53 108 -154 387 0 0 0 chr17 69298322 69298365 -16140115 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 1269 63 0 0 chr17 69299685 69299871 -16138609 + AluY SINE Alu 125 310 0 2219 104 3 3 chr17 69300287 69300596 -16137884 - AluSx SINE Alu -3 309 1 1963 121 87 38 chr17 69301223 69301570 -16136910 - THE1B LTR MaLR 0 364 1 1790 229 59 14 chr17 69302614 69303054 -16135426 + MLT1C LTR MaLR 6 465 -2 236 258 147 55 chr17 69304099 69304262 -16134218 + MIR SINE MIR 81 258 -4 2731 82 27 5 chr17 69304262 69304629 -16133851 + THE1C LTR MaLR 1 375 0 2065 137 0 3 chr17 69305214 69305527 -16132953 - AluSx SINE Alu 0 312 1 445 264 0 4 chr17 69305637 69305789 -16132691 - MIR SINE MIR -6 256 51 1428 186 0 33 chr17 69305841 69306115 -16132365 + AluJb SINE Alu 5 269 -43 257 133 22 0 chr17 69307452 69307497 -16130983 + MIR3 SINE MIR 118 163 -45 1817 154 14 0 chr17 69307630 69307923 -16130557 - AluJo SINE Alu -15 297 1 212 167 0 0 chr17 69307935 69307977 -16130503 + A-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr17 69309426 69309446 -16129034 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1991 71 6 95 chr17 69310256 69310592 -16127888 - AluSq SINE Alu -7 306 1 21 57 0 0 chr17 69311063 69311098 -16127382 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr17 69311707 69311728 -16126752 + AT_rich Low_complexity Low_complexity 1 21 0 1432 188 83 11 chr17 69312028 69312305 -16126175 - AluJo SINE Alu -5 297 1 203 263 18 0 chr17 69313135 69313192 -16125288 + CT-rich Low_complexity Low_complexity 1 58 0 2112 77 3 21 chr17 69313734 69314021 -16124459 + AluSp SINE Alu 18 299 -14 261 277 59 10 chr17 69314022 69314123 -16124357 + MIR SINE MIR 33 138 -124 766 310 140 35 chr17 69315012 69315677 -16122803 - L3 LINE CR1 -199 1378 644 1990 130 0 16 chr17 69315948 69316264 -16122216 - AluSx SINE Alu -1 311 1 290 333 89 18 chr17 69316940 69317108 -16121372 - MIR SINE MIR -13 249 70 417 257 72 40 chr17 69317314 69317466 -16121014 + LTR37B LTR ERV1 1 157 -311 2254 94 0 0 chr17 69317482 69317779 -16120701 + AluSx SINE Alu 1 297 -15 831 159 74 6 chr17 69317780 69317943 -16120537 - L1MB8 LINE L1 -7 6171 5998 824 136 158 121 chr17 69318030 69318303 -16120177 - MER4C LTR ERV1 -2 463 181 1287 126 5 0 chr17 69318306 69318504 -16119976 - AluSp SINE Alu 0 313 115 21 0 0 0 chr17 69319101 69319122 -16119358 + AT_rich Low_complexity Low_complexity 1 21 0 2008 126 23 0 chr17 69319309 69319611 -16118869 - AluSx SINE Alu -3 309 1 2445 63 0 0 chr17 69321338 69321640 -16116840 + AluY SINE Alu 1 302 -9 474 328 86 45 chr17 69321945 69322200 -16116280 - MIR SINE MIR 0 262 3 199 221 88 29 chr17 69322702 69322770 -16115710 - MIR3 SINE MIR -9 199 128 394 246 88 26 chr17 69323450 69323564 -16114916 + MIR SINE MIR 3 123 -139 1773 145 20 3 chr17 69324749 69325045 -16113435 - AluSx SINE Alu -3 309 9 408 202 32 11 chr17 69325153 69325247 -16113233 + MIR SINE MIR 49 144 -118 2180 78 7 3 chr17 69326360 69326654 -16111826 - AluY SINE Alu -16 295 1 1812 119 0 40 chr17 69330882 69331185 -16107295 + AluSx SINE Alu 1 291 -21 2081 115 0 14 chr17 69331549 69331845 -16106635 - AluSx SINE Alu -20 292 1 217 200 229 0 chr17 69331901 69331971 -16106509 - MIR SINE MIR -105 157 72 2310 66 0 3 chr17 69332099 69332388 -16106092 + AluY SINE Alu 1 288 -23 1317 222 43 51 chr17 69332880 69333274 -16105206 - L1MEc LINE L1 -3918 2478 2083 1546 235 32 24 chr17 69333274 69333737 -16104743 - MLT1C LTR MaLR 0 467 1 1317 222 43 51 chr17 69333737 69333754 -16104726 - L1MEc LINE L1 -4313 2083 2067 180 0 0 0 chr17 69333754 69333774 -16104706 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1317 222 43 51 chr17 69333774 69333892 -16104588 - L1MEc LINE L1 -4329 2067 1952 245 296 68 11 chr17 69335416 69335504 -16102976 - MIR SINE MIR -13 249 157 351 245 200 39 chr17 69335515 69335670 -16102810 + MLT1D LTR MaLR 10 189 -316 2011 121 10 17 chr17 69335761 69336058 -16102422 - AluJb SINE Alu -17 295 1 453 308 29 35 chr17 69336109 69336281 -16102199 - MIR SINE MIR -79 183 13 2136 113 7 0 chr17 69337325 69337607 -16100873 + AluSx SINE Alu 3 286 -26 361 234 0 0 chr17 69337934 69338011 -16100469 - MLT1F1 LTR MaLR -3 539 463 1243 179 0 18 chr17 69338015 69338233 -16100247 - AluJb SINE Alu -12 300 87 1335 221 138 9 chr17 69338233 69338679 -16099801 - MLT1F1 LTR MaLR -74 493 1 303 244 13 0 chr17 69338780 69338858 -16099622 - L1ME3 LINE L1 -3 6159 6081 1683 189 7 3 chr17 69338970 69339267 -16099213 + AluJb SINE Alu 1 298 -14 1526 235 112 20 chr17 69339269 69339804 -16098676 - MLT1E LTR MaLR 0 593 2 1972 147 3 7 chr17 69339937 69340237 -16098243 - AluSx SINE Alu -13 299 1 1588 194 108 6 chr17 69340386 69340711 -16097769 + MLT1F1 LTR MaLR 8 365 -202 716 143 118 0 chr17 69341088 69341207 -16097273 + FLAM_C SINE Alu 1 133 0 2120 113 10 3 chr17 69341832 69342132 -16096348 - AluSx SINE Alu -10 302 1 25 0 0 0 chr17 69342673 69342698 -16095782 + AT_rich Low_complexity Low_complexity 1 25 0 213 121 0 0 chr17 69343263 69343296 -16095184 + (T)n Simple_repeat Simple_repeat 1 33 0 309 329 85 41 chr17 69343406 69343508 -16094972 + L3 LINE CR1 1191 1287 -290 1803 127 93 34 chr17 69343508 69343862 -16094618 + THE1C LTR MaLR 1 375 0 309 329 85 41 chr17 69343862 69344075 -16094405 + L3 LINE CR1 1287 1520 -57 190 289 137 61 chr17 69345135 69345332 -16093148 - L2 LINE L2 -2 3311 3100 188 400 9 0 chr17 69345652 69345767 -16092713 - L2 LINE L2 -639 2675 2560 326 287 0 89 chr17 69346083 69346145 -16092335 - MIR3 SINE MIR 0 208 142 2354 92 0 22 chr17 69346145 69346461 -16092019 + AluSg1 SINE Alu 1 309 0 326 287 0 89 chr17 69346461 69346555 -16091925 - MIR3 SINE MIR -66 142 66 2617 163 72 10 chr17 69348492 69349008 -16089472 + L1MB3 LINE L1 5617 6164 -19 261 184 36 0 chr17 69349014 69349182 -16089298 + (TA)n Simple_repeat Simple_repeat 2 175 0 2227 117 10 0 chr17 69349527 69349836 -16088644 - AluSx SINE Alu 0 312 1 3015 148 83 12 chr17 69349962 69350542 -16087938 - L1MC2 LINE L1 0 6344 5724 710 253 65 16 chr17 69350657 69350902 -16087578 + MER33 DNA MER1_type 1 257 -67 664 114 9 9 chr17 69350902 69351016 -16087464 + (TTCC)n Simple_repeat Simple_repeat 1 114 0 2091 147 0 0 chr17 69351016 69351323 -16087157 - AluSx SINE Alu -5 307 1 302 228 38 0 chr17 69351323 69351402 -16087078 + MER33 DNA MER1_type 242 323 -1 292 352 9 0 chr17 69351455 69351563 -16086917 - L2 LINE L2 -6 3307 3199 2202 106 0 0 chr17 69351644 69351928 -16086552 + AluSg SINE Alu 1 284 -26 285 300 67 0 chr17 69352005 69352125 -16086355 + MIR SINE MIR 45 172 -90 204 67 0 0 chr17 69353417 69353447 -16085033 + (T)n Simple_repeat Simple_repeat 1 30 0 1995 146 3 0 chr17 69354977 69355264 -16083216 + AluSx SINE Alu 1 288 -24 356 335 77 0 chr17 69355870 69356118 -16082362 + L1ME3A LINE L1 4870 5136 -1010 2149 235 116 25 chr17 69356140 69356231 -16082249 + L1ME3A LINE L1 5184 5265 -905 2272 94 7 7 chr17 69356231 69356528 -16081952 + AluSq SINE Alu 1 297 -16 2149 235 116 25 chr17 69356528 69357332 -16081148 + L1ME3A LINE L1 5265 6164 -6 22 35 0 0 chr17 69357395 69357424 -16081056 + AT_rich Low_complexity Low_complexity 1 29 0 185 228 193 0 chr17 69357779 69357836 -16080644 + MIR SINE MIR 38 105 -103 2081 141 0 0 chr17 69359129 69359433 -16079047 + AluSx SINE Alu 1 304 -8 1247 183 45 0 chr17 69359510 69359734 -16078746 - AluJo SINE Alu -78 234 1 26 30 0 0 chr17 69359750 69359783 -16078697 + AT_rich Low_complexity Low_complexity 1 33 0 643 165 25 25 chr17 69360789 69360910 -16077570 + FLAM_A SINE Alu 2 122 -11 24 0 0 0 chr17 69360912 69360936 -16077544 + AT_rich Low_complexity Low_complexity 1 24 0 483 224 21 35 chr17 69361286 69361429 -16077051 + MIR SINE MIR 89 229 -33 364 229 24 0 chr17 69361441 69361524 -16076956 - Tigger7 DNA MER2_type 0 2587 2503 900 159 145 42 chr17 69361526 69361740 -16076740 + MER46A DNA MER2_type 1 236 0 * 2125 215 64 27 chr17 69361740 69362241 -16076239 - Tigger7 DNA MER2_type -80 2507 2026 2257 96 7 3 chr17 69362241 69362534 -16075946 + AluSq SINE Alu 1 294 -19 2125 215 64 27 chr17 69362534 69362632 -16075848 - Tigger7 DNA MER2_type -561 2026 2 2253 101 3 0 chr17 69362779 69363067 -16075413 + AluSg SINE Alu 1 289 -21 1968 128 20 3 chr17 69363818 69364114 -16074366 - AluJb SINE Alu -11 301 1 234 0 0 0 chr17 69365080 69365106 -16073374 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 494 286 112 5 chr17 69366388 69366584 -16071896 - MIR SINE MIR -11 251 35 741 236 22 76 chr17 69367567 69367842 -16070638 - L1ME3A LINE L1 -10 6160 5901 1145 208 12 17 chr17 69368141 69368381 -16070099 - MER58B DNA MER1_type -9 332 94 2421 93 0 0 chr17 69368408 69368719 -16069761 - AluY SINE Alu 0 311 1 277 209 81 0 chr17 69368816 69368902 -16069578 + MIR SINE MIR 57 149 -113 378 143 57 0 chr17 69369208 69369278 -16069202 - Tigger4(Zombi) DNA MER2_type 0 2731 2658 2521 104 22 0 chr17 69369280 69369636 -16068844 + THE1B LTR MaLR 1 364 0 750 244 80 13 chr17 69369851 69370076 -16068404 + MIR SINE MIR 23 262 0 1196 193 58 120 chr17 69371087 69371152 -16067328 - MLT1C LTR MaLR -4 463 396 2159 113 0 22 chr17 69371152 69371470 -16067010 - AluSx SINE Alu -1 311 1 1196 193 58 120 chr17 69371470 69371813 -16066667 - MLT1C LTR MaLR -71 396 83 2416 171 35 91 chr17 69371813 69372461 -16066019 - LTR9 LTR ERV1 0 612 1 1196 193 58 120 chr17 69372461 69372501 -16065979 - MLT1C LTR MaLR -384 83 42 245 314 65 0 chr17 69374286 69374439 -16064041 - L1ME3A LINE L1 -205 5965 5803 234 135 19 154 chr17 69374515 69374619 -16063861 + L1MC4 LINE L1 6614 6703 -1339 186 133 0 0 chr17 69374621 69374651 -16063829 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 310 307 0 0 chr17 69374654 69374742 -16063738 - L1MC4 LINE L1 -1340 6702 6615 296 207 0 24 chr17 69374743 69374825 -16063655 + (TATATG)n Simple_repeat Simple_repeat 6 85 0 270 82 0 0 chr17 69374829 69374878 -16063602 + LTR66 LTR ERVL 394 442 -168 564 280 94 31 chr17 69374925 69375377 -16063103 - L1ME3A LINE L1 -482 5639 5194 2076 120 20 3 chr17 69375578 69375877 -16062603 - AluSq SINE Alu -3 310 7 404 326 87 14 chr17 69376173 69376520 -16061960 - L1ME4a LINE L1 -81 6040 5669 2197 128 12 0 chr17 69376723 69377052 -16061428 - MER1B DNA MER1_type 0 337 5 2275 102 0 3 chr17 69377511 69377804 -16060676 + AluSx SINE Alu 3 294 -18 398 213 21 0 chr17 69377933 69378027 -16060453 + MIR SINE MIR 46 141 -121 1716 192 0 19 chr17 69378093 69378401 -16060079 - AluJb SINE Alu -10 302 1 2109 125 38 0 chr17 69379015 69379304 -16059176 + AluSx SINE Alu 1 300 -12 2402 98 3 0 chr17 69379726 69380032 -16058448 - AluSg SINE Alu -3 307 1 584 264 113 72 chr17 69380095 69380577 -16057903 - MLT1J LTR MaLR -7 459 3 2286 99 0 3 chr17 69380744 69381037 -16057443 + AluSq SINE Alu 1 292 -21 873 231 92 32 chr17 69381835 69382086 -16056394 - MLT1C LTR MaLR 0 467 202 763 248 0 0 chr17 69382129 69382274 -16056206 - FRAM SINE Alu -31 145 1 372 248 27 53 chr17 69382318 69382392 -16056088 - MLT1C LTR MaLR -349 156 82 2258 86 36 7 chr17 69382392 69382694 -16055786 - AluY SINE Alu 0 311 1 372 248 27 53 chr17 69382694 69382788 -16055692 - MLT1C LTR MaLR -423 82 1 31810 27 18 1 chr17 69383522 69389538 -16048942 - L1HS LINE L1 0 6155 1 1788 173 30 12 chr17 69389708 69390044 -16048436 + MER61A LTR ERV1 2 343 0 2315 196 15 9 chr17 69390529 69390983 -16047497 - L1MB3 LINE L1 0 6183 5727 3263 182 92 20 chr17 69392337 69393040 -16045440 + L1MB8 LINE L1 5425 6178 0 2251 110 0 13 chr17 69393050 69393349 -16045131 + AluSc SINE Alu 1 295 -14 193 374 11 0 chr17 69395580 69395671 -16042809 + MER5A DNA MER1_type 63 154 -35 372 219 44 51 chr17 69395681 69395818 -16042662 + L1MC5 LINE L1 7782 7917 -44 210 255 0 39 chr17 69396602 69396653 -16041827 + polypurine Low_complexity Low_complexity 1 49 0 2882 198 131 33 chr17 69396776 69397525 -16040955 - MER21B LTR ERV1 -1 862 41 1761 174 57 27 chr17 69397525 69397859 -16040621 - LTR10B LTR ERV1 0 547 204 472 147 42 21 chr17 69397865 69397960 -16040520 - LTR10B LTR ERV1 -450 97 1 300 290 11 21 chr17 69398006 69398099 -16040381 - MER21B LTR ERV1 -771 92 1 4308 192 37 5 chr17 69398118 69398977 -16039503 - L1MB7 LINE L1 -11 6173 5287 2321 122 0 0 chr17 69399039 69399342 -16039138 + AluSq SINE Alu 1 303 -10 1432 184 38 81 chr17 69400367 69400720 -16037760 - MLT1C LTR MaLR -3 464 130 1975 141 16 26 chr17 69400720 69401032 -16037448 - AluSx SINE Alu -3 309 1 1432 184 38 81 chr17 69401032 69401097 -16037383 - MLT1C LTR MaLR -337 130 64 284 292 35 18 chr17 69401505 69401618 -16036862 + MIR SINE MIR 65 179 -83 860 240 81 81 chr17 69401804 69402309 -16036171 - MLT1J LTR MaLR -2 509 5 280 279 23 23 chr17 69403410 69403496 -16034984 - L2 LINE L2 -1 3271 3186 2233 120 7 0 chr17 69405014 69405314 -16033166 + AluSq SINE Alu 1 302 -11 189 107 0 0 chr17 69405790 69405818 -16032662 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 293 316 45 34 chr17 69407401 69407578 -16030902 - MLT1J LTR MaLR -331 180 2 1325 200 56 18 chr17 69408861 69409146 -16029334 + AluJo SINE Alu 1 296 -16 2250 112 29 9 chr17 69409566 69409914 -16028566 - THE1A LTR MaLR 0 355 1 456 314 124 44 chr17 69410485 69410848 -16027632 - L2 LINE L2 0 3313 2922 180 143 0 48 chr17 69411049 69411091 -16027389 - L2 LINE L2 -557 2757 2718 377 153 0 0 chr17 69411398 69411457 -16027023 - MER3 DNA MER1_type -1 208 150 1937 112 52 4 chr17 69411460 69411768 -16026712 + AluSx SINE Alu 1 321 0 502 257 92 7 chr17 69411803 69411955 -16026525 - MER3 DNA MER1_type -44 165 1 237 312 46 28 chr17 69412730 69412839 -16025641 + MIR SINE MIR 36 146 -116 1837 159 30 17 chr17 69413133 69413296 -16025184 - AluSx SINE Alu -7 305 135 2382 82 0 29 chr17 69413296 69413611 -16024869 - AluY SINE Alu -5 306 1 1837 159 30 17 chr17 69413611 69413748 -16024732 - AluSx SINE Alu -177 135 1 601 288 66 16 chr17 69415145 69415402 -16023078 + L1ME1 LINE L1 5605 5874 -247 2385 85 3 7 chr17 69415687 69415994 -16022486 + AluSp SINE Alu 1 306 -7 322 235 26 43 chr17 69416649 69416764 -16021716 + L1ME1 LINE L1 5953 6065 -101 737 211 74 10 chr17 69416765 69417001 -16021479 + L1MD3 LINE L1 6110 7980 -10 519 239 126 18 chr17 69417480 69417647 -16020833 + MLT1I LTR MaLR 195 379 -30 554 271 66 10 chr17 69417850 69418143 -16020337 + MLT1I LTR MaLR 27 394 -15 193 256 0 0 chr17 69418197 69418240 -16020240 + L2 LINE L2 3218 3260 -12 1122 139 0 0 chr17 69418366 69418524 -16019956 - FAM SINE Alu -17 158 1 1415 75 60 0 chr17 69418590 69418789 -16019691 + L1MA1 LINE L1 6092 6302 0 1496 168 0 0 chr17 69419307 69419568 -16018912 - AluJo SINE Alu 0 314 54 476 340 0 0 chr17 69419584 69419775 -16018705 - L1MC4a LINE L1 -1878 5930 5740 908 162 76 0 chr17 69422709 69422906 -16015574 + L1MD3 LINE L1 7784 7995 0 184 226 0 81 chr17 69423033 69423095 -16015385 - MIR3 SINE MIR -50 158 102 229 310 69 0 chr17 69423726 69423813 -16014667 - MIR SINE MIR -93 115 23 692 202 37 53 chr17 69424664 69424852 -16013628 - MER5A DNA MER1_type 0 189 5 961 199 62 0 chr17 69424864 69425040 -16013440 - MER58A DNA MER1_type 0 224 38 261 180 0 0 chr17 69425051 69425101 -16013379 + (TA)n Simple_repeat Simple_repeat 2 51 0 424 240 30 0 chr17 69425212 69425312 -16013168 + U6 snRNA snRNA 1 103 -4 2013 87 8 0 chr17 69425544 69425798 -16012682 + AluY SINE Alu 37 292 -19 332 258 45 45 chr17 69425995 69426127 -16012353 + L2 LINE L2 2332 2463 -851 526 101 152 0 chr17 69426210 69426289 -16012191 + 5S rRNA rRNA 1 91 -30 2251 120 0 0 chr17 69426329 69426629 -16011851 - AluSx SINE Alu -12 300 1 2165 113 13 7 chr17 69426656 69426956 -16011524 + AluSx SINE Alu 1 302 -10 701 271 61 26 chr17 69427024 69427253 -16011227 - MIR SINE MIR -25 237 1 2204 88 14 0 chr17 69427820 69428104 -16010376 + AluSx SINE Alu 1 288 -24 2470 75 0 0 chr17 69429076 69429370 -16009110 - AluY SINE Alu -17 294 1 2065 99 11 3 chr17 69429727 69430011 -16008469 + AluSq SINE Alu 26 311 -2 912 191 6 6 chr17 69431785 69431947 -16006533 + FRAM SINE Alu 1 162 -4 570 260 128 0 chr17 69432911 69433115 -16005365 - MIR SINE MIR -24 238 9 24 0 0 0 chr17 69434860 69434884 -16003596 + AT_rich Low_complexity Low_complexity 1 24 0 1399 183 31 93 chr17 69434884 69435240 -16003240 - MLT1A1 LTR MaLR 0 365 32 468 247 102 18 chr17 69435269 69435435 -16003045 - MIR SINE MIR -11 251 72 601 167 14 58 chr17 69435607 69435745 -16002735 - L1MD3 LINE L1 -13 7982 7851 2222 114 0 16 chr17 69435752 69436069 -16002411 + AluSx SINE Alu 1 312 0 583 254 53 91 chr17 69436292 69436556 -16001924 - MIR SINE MIR -3 259 6 2007 128 0 0 chr17 69438884 69439200 -15999280 - AluSx SINE Alu 0 316 1 608 225 152 65 chr17 69439200 69439476 -15999004 + L1MC4 LINE L1 7599 7898 -144 1581 188 11 0 chr17 69440253 69440540 -15997940 + AluJo SINE Alu 1 290 -22 290 264 67 140 chr17 69441260 69441438 -15997042 - MIR SINE MIR -6 256 92 227 254 94 72 chr17 69442479 69442617 -15995863 + L2 LINE L2 3117 3257 -56 1492 109 60 53 chr17 69444911 69445139 -15993341 - THE1C LTR MaLR 0 375 99 2109 87 0 24 chr17 69445139 69445467 -15993013 + AluSq SINE Alu 1 321 0 1492 109 60 53 chr17 69445467 69445567 -15992913 - THE1C LTR MaLR -276 99 1 215 314 0 0 chr17 69445576 69445627 -15992853 + MIR SINE MIR 29 79 -183 307 276 32 49 chr17 69445956 69446079 -15992401 + MIR3 SINE MIR 75 195 -13 1228 158 31 107 chr17 69446376 69446693 -15991787 + AluJo SINE Alu 1 293 -19 3271 196 63 29 chr17 69446707 69447421 -15991059 - LTR39 LTR ERV1 0 783 46 2190 53 0 66 chr17 69447549 69447853 -15990627 + AluY SINE Alu 1 284 -27 201 39 0 0 chr17 69447853 69447879 -15990601 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 239 228 35 18 chr17 69448176 69448233 -15990247 - MLT1K LTR MaLR -344 244 187 2025 125 0 0 chr17 69450814 69451109 -15987371 - AluSx SINE Alu -17 295 1 1352 175 65 10 chr17 69451589 69451881 -15986599 - AluJo SINE Alu -4 308 1 282 315 56 9 chr17 69451917 69452025 -15986455 + L2 LINE L2 3178 3290 -23 492 265 160 6 chr17 69452083 69452264 -15986216 - MIR SINE MIR -10 252 44 319 248 9 97 chr17 69452566 69452679 -15985801 + MER5A DNA MER1_type 80 182 -7 194 258 208 63 chr17 69453932 69454091 -15984389 - MIR3 SINE MIR -21 187 6 2523 85 68 8 chr17 69454234 69454588 -15983892 - THE1C LTR MaLR 0 375 1 1831 153 7 3 chr17 69455762 69456057 -15982423 + AluJo SINE Alu 1 296 -16 419 311 106 46 chr17 69456331 69456559 -15981921 + HAL1b LINE L1 77 290 -1058 2085 102 0 7 chr17 69456559 69456853 -15981627 + AluSx SINE Alu 1 292 -20 419 311 106 46 chr17 69456853 69457229 -15981251 + HAL1b LINE L1 290 717 -631 1645 161 16 31 chr17 69457521 69457838 -15980642 + AluJb SINE Alu 1 312 0 2093 112 3 3 chr17 69457871 69458175 -15980305 + AluSg SINE Alu 1 304 -6 529 266 141 21 chr17 69458263 69458455 -15980025 + MIR SINE MIR 18 232 -30 450 298 153 48 chr17 69458831 69459308 -15979172 + L1ME4a LINE L1 4877 5403 -743 381 298 44 6 chr17 69459554 69459735 -15978745 + L1ME4a LINE L1 5653 5840 -281 355 282 66 61 chr17 69459784 69459965 -15978515 + L1ME4a LINE L1 5939 6120 -1 1541 180 58 13 chr17 69462047 69462358 -15976122 - MLT1A1 LTR MaLR -40 325 1 978 238 14 22 chr17 69463968 69464017 -15974463 + MER58A DNA MER1_type 3 51 -2369 1764 145 3 3 chr17 69464017 69464321 -15974159 - AluSx SINE Alu 0 304 1 978 238 14 22 chr17 69464321 69464493 -15973987 + MER58A DNA MER1_type 51 223 -1 589 315 35 0 chr17 69464544 69464744 -15973736 + MIR SINE MIR 10 216 -46 708 184 7 21 chr17 69464770 69464911 -15973569 - L1MB7 LINE L1 -19 6165 6027 968 208 27 45 chr17 69464922 69465370 -15973110 + MLT1D LTR MaLR 1 501 -4 2375 62 3 3 chr17 69466116 69466421 -15972059 - AluY SINE Alu -6 305 1 367 245 105 28 chr17 69466764 69466906 -15971574 + MIR SINE MIR 38 188 -68 2042 128 0 0 chr17 69467888 69468186 -15970294 + AluSx SINE Alu 1 298 -14 839 266 120 0 chr17 69468456 69468689 -15969791 - MIR SINE MIR 0 262 2 207 0 0 0 chr17 69469648 69469671 -15968809 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1247 195 139 44 chr17 69469840 69470250 -15968230 - MER113 DNA MER1_type? -2 519 71 207 304 18 0 chr17 69470252 69470308 -15968172 - MER5A DNA MER1_type -132 57 1 732 220 30 6 chr17 69470322 69470490 -15967990 + MER5B DNA MER1_type 1 172 -6 1752 126 0 0 chr17 69470561 69470815 -15967665 - AluSx SINE Alu -32 280 27 629 267 175 0 chr17 69471148 69471354 -15967126 - MIR SINE MIR 0 262 21 355 338 27 27 chr17 69472139 69472287 -15966193 - MIR SINE MIR -50 212 65 517 152 355 0 chr17 69472797 69472935 -15965545 - MER5A DNA MER1_type -2 187 1 213 317 176 28 chr17 69473218 69473360 -15965120 + MER5A DNA MER1_type 4 166 -23 * 605 196 157 13 chr17 69473235 69473388 -15965092 - MER5A DNA MER1_type -6 183 9 371 202 150 121 chr17 69473404 69473577 -15964903 + MER5B DNA MER1_type 1 178 0 405 259 180 7 chr17 69473686 69473819 -15964661 - MER5A DNA MER1_type -32 157 11 210 309 53 21 chr17 69474647 69474741 -15963739 - L2 LINE L2 -209 3063 2967 1045 243 28 5 chr17 69474867 69475085 -15963395 - MER58A DNA MER1_type -1 223 1 1710 168 7 10 chr17 69475462 69475765 -15962715 + AluJb SINE Alu 1 302 -10 252 254 14 14 chr17 69476572 69476643 -15961837 + CT-rich Low_complexity Low_complexity 5 75 0 641 254 9 51 chr17 69477265 69477482 -15960998 - Charlie8 DNA MER1_type -2138 279 72 2048 123 17 0 chr17 69477492 69477794 -15960686 + AluSx SINE Alu 1 307 -5 1354 193 37 27 chr17 69477805 69478100 -15960380 + AluSx SINE Alu 3 300 -12 34 65 0 0 chr17 69478202 69478264 -15960216 + AT_rich Low_complexity Low_complexity 1 62 0 232 180 40 20 chr17 69480351 69480401 -15958079 - L2 LINE L2 -70 3243 3193 1184 193 28 0 chr17 69480632 69480844 -15957636 - MER58A DNA MER1_type -6 218 1 189 309 238 0 chr17 69480860 69480944 -15957536 + MIR SINE MIR 48 151 -111 2262 85 3 3 chr17 69481143 69481449 -15957031 + AluSg1 SINE Alu 1 306 -3 216 0 0 0 chr17 69481709 69481733 -15956747 + (A)n Simple_repeat Simple_repeat 1 24 0 407 324 9 0 chr17 69483124 69483232 -15955248 + MIR SINE MIR 4 112 -150 896 272 5 5 chr17 69483277 69483490 -15954990 + MIR SINE MIR 49 261 -1 5824 205 131 31 chr17 69484218 69485634 -15952846 + L1MA10 LINE L1 5 1572 -4569 1711 155 10 26 chr17 69485634 69485938 -15952542 + AluSx SINE Alu 3 301 -11 5824 205 131 31 chr17 69485938 69485977 -15952503 + L1MA10 LINE L1 1572 1606 -4535 1023 172 11 6 chr17 69485994 69486168 -15952312 + FAM SINE Alu 1 175 0 10769 162 31 78 chr17 69486168 69486540 -15951940 + L1MA10 LINE L1 3243 3631 -2767 1461 117 56 9 chr17 69486540 69486753 -15951727 - AluJo SINE Alu -25 287 65 10769 162 31 78 chr17 69486753 69489629 -15948851 + L1MA10 LINE L1 3631 6347 -51 5613 131 129 21 chr17 69489649 69490453 -15948027 - Tigger3b DNA MER2_type -1798 1230 272 2167 131 0 3 chr17 69490453 69490759 -15947721 + AluSx SINE Alu 1 305 -7 5613 131 129 21 chr17 69490759 69491063 -15947417 - Tigger3b DNA MER2_type -2756 272 2 302 227 193 8 chr17 69492990 69493109 -15945371 + MER5A DNA MER1_type 49 189 0 1139 221 82 52 chr17 69493219 69493295 -15945185 + MER58B DNA MER1_type 2 74 -2346 2376 60 17 27 chr17 69493295 69493593 -15944887 + AluY SINE Alu 1 295 -16 1139 221 82 52 chr17 69493593 69493846 -15944634 + MER58B DNA MER1_type 74 341 0 191 360 189 0 chr17 69495645 69495756 -15942724 + L3 LINE CR1 1433 1564 -13 2282 116 10 0 chr17 69496240 69496550 -15941930 - AluSq SINE Alu 0 313 1 2193 88 0 44 chr17 69497690 69498022 -15940458 + AluSx SINE Alu 2 320 0 707 226 15 41 chr17 69499642 69499837 -15938643 + MIR SINE MIR 38 227 -35 2265 117 0 0 chr17 69499991 69500291 -15938189 - AluSg SINE Alu -10 300 1 206 79 53 26 chr17 69501651 69501689 -15936791 - MIR SINE MIR -63 145 107 844 230 47 9 chr17 69504122 69504335 -15934145 + MER58A DNA MER1_type 1 221 -3 198 326 11 11 chr17 69504424 69504516 -15933964 + MIR3 SINE MIR 110 201 -7 193 336 94 0 chr17 69504638 69504766 -15933714 + MIR3 SINE MIR 62 201 -7 1018 224 37 0 chr17 69505037 69505251 -15933229 - MLT1A1 LTR MaLR 0 365 144 506 174 0 0 chr17 69505259 69505345 -15933135 - FRAM SINE Alu -17 159 74 235 258 0 21 chr17 69555361 69555454 -15883026 + C-rich Low_complexity Low_complexity 3 93 0 * 299 222 12 12 chr17 69555441 69555522 -15882958 + (CTG)n Simple_repeat Simple_repeat 2 82 0 1473 59 0 2 chr17 69555523 69556053 -15882427 + (TGG)n Simple_repeat Simple_repeat 1 529 0 1284 89 0 0 chr17 69556071 69556251 -15882229 + (TGG)n Simple_repeat Simple_repeat 1 180 0 675 205 123 10 chr17 69557785 69557980 -15880500 - MER20 DNA MER1_type -2 217 1 2072 138 3 0 chr17 69558492 69558789 -15879691 + AluJb SINE Alu 1 298 -14 1298 99 0 0 chr17 69558932 69559094 -15879386 + AluSg/x SINE Alu 135 296 -14 237 319 0 0 chr17 69559239 69559308 -15879172 - MIR SINE MIR -72 190 122 186 103 0 0 chr17 69564858 69564887 -15873593 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2246 96 7 0 chr17 69565257 69565562 -15872918 - AluSq SINE Alu 0 307 1 252 0 0 0 chr17 69567451 69567479 -15871001 + (T)n Simple_repeat Simple_repeat 1 28 0 327 282 82 0 chr17 69567551 69567661 -15870819 - L2 LINE L2 -1 3271 3153 879 245 0 0 chr17 69567974 69568162 -15870318 + AluJb SINE Alu 119 306 -6 818 222 24 14 chr17 69569056 69569268 -15869212 + MER20 DNA MER1_type 5 218 -1 375 41 0 0 chr17 69569499 69569548 -15868932 + (TC)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr17 69569547 69569570 -15868910 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 491 254 48 8 chr17 69569581 69569707 -15868773 + L2 LINE L2 3183 3313 0 363 226 0 0 chr17 69570374 69570476 -15868004 + (CA)n Simple_repeat Simple_repeat 1 102 0 437 223 51 76 chr17 69570485 69570642 -15867838 - MIR SINE MIR -11 251 99 385 302 56 0 chr17 69570857 69570983 -15867497 - MIR SINE MIR -70 192 60 2091 121 36 39 chr17 69571751 69572115 -15866365 - THE1B LTR MaLR -1 363 1 2280 113 0 0 chr17 69572219 69572512 -15865968 - AluSg SINE Alu -17 293 1 308 292 38 16 chr17 69572920 69573074 -15865406 - L1ME LINE L1 -345 5776 5616 2436 56 52 0 chr17 69573074 69573362 -15865118 - AluY SINE Alu -8 303 1 308 292 38 16 chr17 69573362 69573392 -15865088 - L1ME LINE L1 -505 5616 5588 1923 160 0 41 chr17 69573393 69573425 -15865055 - AluSx SINE Alu -6 306 274 195 42 0 0 chr17 69573425 69573449 -15865031 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1923 160 0 41 chr17 69573449 69573735 -15864745 - AluSx SINE Alu -38 274 1 189 146 21 62 chr17 69573840 69573888 -15864592 - L2 LINE L2 -1 3312 3267 1627 166 37 96 chr17 69574032 69574491 -15863989 + MSTB1 LTR MaLR 1 432 0 1102 207 73 4 chr17 69574493 69574768 -15863712 + MLT-int LTR MaLR 2 295 -1440 2536 200 61 48 chr17 69574877 69575286 -15863194 + MSTB2-int LTR MaLR 933 1348 -303 2486 75 7 0 chr17 69575286 69575581 -15862899 + AluY SINE Alu 1 297 -14 2536 200 61 48 chr17 69575581 69575889 -15862591 + MSTB2-int LTR MaLR 1348 1651 0 2219 155 91 2 chr17 69575889 69576309 -15862171 + MSTB2 LTR MaLR 1 457 0 21 36 0 0 chr17 69626770 69626798 -15811682 + AT_rich Low_complexity Low_complexity 1 28 0 375 216 233 0 chr17 69627370 69627486 -15810994 + MER103 DNA DNA 3 145 -21 437 273 117 10 chr17 69627616 69627835 -15810645 + MIR SINE MIR 20 262 0 694 216 0 0 chr17 69627884 69628023 -15810457 - MSTB2 LTR MaLR 0 457 319 275 244 0 11 chr17 69628780 69628870 -15809610 + CT-rich Low_complexity Low_complexity 1 89 0 476 231 134 0 chr17 69629135 69629269 -15809211 + MIR SINE MIR 1 152 -110 1242 264 22 39 chr17 69629290 69629706 -15808774 + L1M4c LINE L1 1413 1821 -4563 1488 87 44 10 chr17 69629708 69629914 -15808566 - MER30 DNA MER1_type 0 230 18 216 97 0 0 chr17 69629979 69630010 -15808470 + (CA)n Simple_repeat Simple_repeat 1 31 0 279 204 143 71 chr17 69630283 69630381 -15808099 - MIR SINE MIR -22 240 136 * 349 252 19 0 chr17 69630379 69630482 -15807998 + MIR SINE MIR 147 251 -11 242 210 210 30 chr17 69631445 69631612 -15806868 - L1ME4a LINE L1 -159 6757 6561 273 252 144 9 chr17 69631709 69631820 -15806660 - L1ME4a LINE L1 -515 6444 6319 423 0 0 0 chr17 69631856 69631903 -15806577 + (TG)n Simple_repeat Simple_repeat 2 48 0 567 245 51 4 chr17 69631941 69632178 -15806302 - L1ME4a LINE L1 -2969 3972 3725 2166 127 0 0 chr17 69632304 69632630 -15805850 - AluSx SINE Alu 0 312 1 575 313 42 24 chr17 69632650 69632957 -15805523 - L1ME4a LINE L1 -856 2446 2250 256 203 34 0 chr17 69632946 69633005 -15805475 - L1ME4a LINE L1 -5080 1343 1283 * 288 280 119 54 chr17 69633419 69633587 -15804893 - L1ME LINE L1 -5891 1040 862 714 165 17 0 chr17 69633904 69634019 -15804461 - FLAM_C SINE Alu -21 122 6 2456 64 0 39 chr17 69634593 69634904 -15803576 - AluY SINE Alu -12 299 1 348 281 36 71 chr17 69634905 69635129 -15803351 + L1ME LINE L1 5574 5789 -332 941 236 127 27 chr17 69635337 69635742 -15802738 + LTR33A LTR ERVL 46 517 -4 349 197 28 0 chr17 69635958 69636029 -15802451 + MIR SINE MIR 55 127 -135 934 141 43 6 chr17 69636029 69636192 -15802288 - L1MB5 LINE L1 -107 6067 5899 1609 111 47 47 chr17 69636192 69636490 -15801990 + MLT1C LTR MaLR 1 298 -169 246 128 0 0 chr17 69637208 69637247 -15801233 + (TTC)n Simple_repeat Simple_repeat 2 40 0 270 277 109 10 chr17 69637587 69637688 -15800792 + L2 LINE L2 2985 3095 -177 194 288 34 96 chr17 69637746 69637892 -15800588 + L2 LINE L2 3163 3299 -14 189 0 0 0 chr17 69637893 69637914 -15800566 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 1648 172 34 14 chr17 69638790 69639087 -15799393 - AluJo SINE Alu -9 303 1 637 235 127 9 chr17 69639091 69639323 -15799157 - L1ME3 LINE L1 0 6170 5903 1011 281 24 4 chr17 69640075 69640328 -15798152 + MIR SINE MIR 4 261 -1 1397 194 4 0 chr17 69640328 69640560 -15797920 + AluJo SINE Alu 1 233 -79 252 231 0 0 chr17 69640560 69640612 -15797868 + LTR30 LTR ERV1 1 52 -670 1308 136 99 78 chr17 69640612 69640988 -15797492 + LTR12 LTR ERV1 55 2032 -406 231 214 56 22 chr17 69640988 69641077 -15797403 + LTR30 LTR ERV1 552 643 -79 590 180 0 0 chr17 69641079 69641179 -15797301 + LTR12 LTR ERV1 615 714 0 363 153 0 0 chr17 69641179 69641238 -15797242 + AluJo SINE Alu 230 288 -14 221 328 29 58 chr17 69641728 69641902 -15796578 + L3b LINE CR1 1212 1380 -203 186 171 0 0 chr17 69642184 69642225 -15796255 + T-rich Low_complexity Low_complexity 1 41 0 2327 106 13 0 chr17 69642265 69642566 -15795914 + AluSx SINE Alu 1 305 -7 2479 81 0 19 chr17 69643130 69643438 -15795042 + AluSg SINE Alu 1 302 -8 252 216 93 31 chr17 69643560 69643657 -15794823 - L1ME4a LINE L1 -54 6067 5965 218 200 0 22 chr17 69643946 69643991 -15794489 + GA-rich Low_complexity Low_complexity 3 46 0 585 339 49 4 chr17 69644835 69645080 -15793400 - MIR SINE MIR -3 259 4 185 244 24 0 chr17 69645160 69645201 -15793279 - MIR SINE MIR -63 199 158 645 239 10 78 chr17 69645536 69645747 -15792733 - MIR SINE MIR -33 229 35 397 267 162 29 chr17 69645936 69646146 -15792334 - L2 LINE L2 -565 2749 2512 181 277 21 0 chr17 69646202 69646249 -15792231 + L2 LINE L2 3224 3271 -1 326 258 54 12 chr17 69646558 69646725 -15791755 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 274 289 11 11 chr17 69646834 69646924 -15791556 + MIR SINE MIR 122 211 -51 2315 109 0 3 chr17 69646941 69647244 -15791236 - AluSc SINE Alu -7 302 1 233 293 171 52 chr17 69647509 69647611 -15790869 + L2 LINE L2 1888 1977 -1337 2027 117 13 23 chr17 69647611 69647910 -15790570 - AluSq SINE Alu -13 300 5 233 293 171 52 chr17 69647910 69648094 -15790386 + L2 LINE L2 1977 2208 -1106 891 215 0 0 chr17 69648107 69648265 -15790215 - FRAM SINE Alu -18 158 1 1039 128 0 0 chr17 69648321 69648477 -15790003 - L1PB1 LINE L1 -1 6150 5995 1280 180 5 5 chr17 69648477 69648687 -15789793 + AluJb SINE Alu 89 301 -11 504 107 0 0 chr17 69648699 69648774 -15789706 - Tigger3(Golem) DNA MER2_type -712 2317 2243 212 226 35 52 chr17 69648889 69648964 -15789516 + A-rich Low_complexity Low_complexity 4 78 -38 2449 71 7 0 chr17 69648964 69649260 -15789220 + AluSp SINE Alu 1 298 -15 212 226 35 52 chr17 69649260 69649299 -15789181 + A-rich Low_complexity Low_complexity 78 116 0 24 0 0 0 chr17 69649892 69649916 -15788564 + AT_rich Low_complexity Low_complexity 1 24 0 2269 129 0 7 chr17 69650103 69650412 -15788068 + AluJb SINE Alu 1 307 -5 256 299 28 9 chr17 69650421 69650528 -15787952 + L1MC4a LINE L1 5816 5924 -1884 2245 70 4 0 chr17 69650597 69650869 -15787611 + AluY SINE Alu 18 290 -21 1058 219 48 62 chr17 69650870 69651162 -15787318 - LTR2 LTR ERV1 -96 353 66 2389 137 19 2 chr17 69651262 69651672 -15786808 + MER57B LTR ERV1 18 434 0 2375 92 0 3 chr17 69651831 69652125 -15786355 + AluSx SINE Alu 7 299 -13 3091 201 64 32 chr17 69652870 69653676 -15784804 - L1MD2 LINE L1 -240 6119 5275 2438 92 3 0 chr17 69653676 69653981 -15784499 - AluSc SINE Alu 0 309 4 3091 201 64 32 chr17 69653981 69654154 -15784326 - L1MD2 LINE L1 -1084 5275 5109 1832 137 0 4 chr17 69654392 69654662 -15783818 + AluSx SINE Alu 37 305 0 2693 181 30 21 chr17 69654667 69654865 -15783615 + L1MB2 LINE L1 5605 5800 -371 1537 147 88 18 chr17 69654865 69655138 -15783342 - AluJo SINE Alu -20 292 1 2693 181 30 21 chr17 69655138 69655501 -15782979 + L1MB2 LINE L1 5800 6171 0 2271 95 3 13 chr17 69655514 69655819 -15782661 + AluSx SINE Alu 1 302 -10 1365 276 58 26 chr17 69655849 69656604 -15781876 + L1M4 LINE L1 2346 3124 -3022 913 198 24 68 chr17 69656711 69656918 -15781562 - AluJo SINE Alu -114 198 1 448 171 18 27 chr17 69656919 69657030 -15781450 - L1MC4 LINE L1 -194 7848 7739 1260 165 67 4 chr17 69657042 69657309 -15781171 - L1MC4 LINE L1 -470 7572 7289 2182 128 0 3 chr17 69657309 69657622 -15780858 + AluSx SINE Alu 1 312 0 702 200 0 0 chr17 69657692 69657812 -15780668 + 5S rRNA rRNA 1 120 -1 2232 105 7 3 chr17 69658312 69658608 -15779872 - AluSx SINE Alu -15 297 1 1192 109 6 0 chr17 69658718 69658874 -15779606 + AluSq SINE Alu 1 157 -156 2051 118 3 11 chr17 69658974 69659261 -15779219 + AluSx SINE Alu 17 301 -11 257 247 0 39 chr17 69659262 69659339 -15779141 - Charlie1 DNA MER1_type -2687 74 1 198 0 0 0 chr17 69659352 69659374 -15779106 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 1952 140 10 10 chr17 69659508 69659815 -15778665 - AluSx SINE Alu -5 307 1 1625 158 43 31 chr17 69659945 69660087 -15778393 - L1MC1 LINE L1 -6 6327 6188 4295 127 6 20 chr17 69660087 69660731 -15777749 + MER41B LTR ERV1 1 635 0 1625 158 43 31 chr17 69660731 69660911 -15777569 - L1MC1 LINE L1 -145 6188 6001 2419 90 7 0 chr17 69660997 69661297 -15777183 - AluSx SINE Alu -10 302 1 2093 125 3 3 chr17 69661451 69661747 -15776733 + AluSx SINE Alu 17 312 0 612 246 82 10 chr17 69661747 69661942 -15776538 - MLT1C LTR MaLR -58 409 201 1819 166 0 27 chr17 69661973 69662268 -15776212 - AluJo SINE Alu -20 292 6 1823 132 7 29 chr17 69662330 69662611 -15775869 - AluSx SINE Alu -37 275 1 222 270 0 32 chr17 69662617 69662680 -15775800 + L2 LINE L2 3134 3194 -78 195 42 0 0 chr17 69663007 69663031 -15775449 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1910 144 0 0 chr17 69663036 69663307 -15775173 - AluSq SINE Alu -42 271 1 314 83 0 0 chr17 69663309 69663357 -15775123 - Alu SINE Alu -2 306 259 1074 91 7 14 chr17 69663697 69663840 -15774640 - AluSg1 SINE Alu -161 148 7 694 195 32 41 chr17 69663846 69663976 -15774504 + Charlie1b DNA MER1_type 115 245 -2516 2171 114 10 0 chr17 69663976 69664265 -15774215 + AluSg SINE Alu 1 292 -18 694 195 32 41 chr17 69664265 69664459 -15774021 + Charlie1b DNA MER1_type 245 523 0 493 230 81 57 chr17 69664459 69664666 -15773814 - MLT1L LTR MaLR -54 561 350 2320 102 13 0 chr17 69664747 69664873 -15773607 + AluSx SINE Alu 1 124 -188 336 64 0 0 chr17 69664873 69664920 -15773560 + (CA)n Simple_repeat Simple_repeat 2 48 0 2320 102 13 0 chr17 69664920 69665098 -15773382 + AluSx SINE Alu 124 309 -3 1448 102 0 5 chr17 69665109 69665295 -15773185 + AluSg/x SINE Alu 109 293 -17 961 164 12 90 chr17 69665303 69665547 -15772933 + L1MB3 LINE L1 5958 6182 -1 1436 134 130 33 chr17 69665656 69665932 -15772548 + AluJb SINE Alu 1 303 -9 2015 141 0 0 chr17 69665943 69666219 -15772261 + AluSx SINE Alu 21 296 -16 354 23 0 0 chr17 69666436 69666479 -15772001 + (CA)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr17 69666982 69667002 -15771478 + (T)n Simple_repeat Simple_repeat 1 20 0 1315 0 0 0 chr17 69667002 69667153 -15771327 - L1HS LINE L1 0 6155 6005 1159 329 47 36 chr17 69667176 69667833 -15770647 + HERV16 LTR ERVL 2254 2932 -2064 2234 104 44 0 chr17 69667833 69668130 -15770350 - AluSg SINE Alu 0 310 1 1159 329 47 36 chr17 69668130 69668258 -15770222 + HERV16 LTR ERVL 2932 3057 -1939 350 200 47 0 chr17 69668313 69668415 -15770065 + L1ME1 LINE L1 6070 6184 0 231 336 32 24 chr17 69669031 69669156 -15769324 - L2 LINE L2 -223 3049 2924 2095 117 3 0 chr17 69669428 69669738 -15768742 + AluSp SINE Alu 1 311 0 1633 131 15 4 chr17 69669771 69670030 -15768450 - AluSx SINE Alu -16 296 35 1481 195 42 82 chr17 69671122 69671231 -15767249 - LTR2 LTR ERV1 0 449 337 2402 59 7 0 chr17 69671231 69671519 -15766961 + AluY SINE Alu 1 290 -21 1481 195 42 82 chr17 69671519 69671835 -15766645 - LTR2 LTR ERV1 -112 337 41 2016 161 0 0 chr17 69672018 69672316 -15766164 + AluJb SINE Alu 1 298 -14 2419 97 0 0 chr17 69672339 69672638 -15765842 + AluSx SINE Alu 7 305 -7 252 86 0 0 chr17 69673363 69673398 -15765082 + (TTA)n Simple_repeat Simple_repeat 2 36 0 314 83 0 0 chr17 69673638 69673686 -15764794 + Alu SINE Alu 259 306 -2 1874 148 0 0 chr17 69673688 69673958 -15764522 + AluSq SINE Alu 1 270 -43 222 270 0 32 chr17 69674318 69674381 -15764099 - L2 LINE L2 -78 3194 3134 2392 80 7 0 chr17 69674387 69674688 -15763792 + AluSp SINE Alu 1 303 -10 2078 110 0 3 chr17 69674993 69675275 -15763205 + AluSx SINE Alu 30 310 -2 713 168 56 0 chr17 69675276 69675437 -15763043 + L1MB5 LINE L1 5723 5892 -282 333 282 51 26 chr17 69675765 69675882 -15762598 - MIR3 SINE MIR -3 205 86 2084 116 7 11 chr17 69675983 69676268 -15762212 + AluSg SINE Alu 1 284 -26 268 147 27 0 chr17 69676268 69676343 -15762137 + (TA)n Simple_repeat Simple_repeat 2 78 0 621 196 196 24 chr17 69676347 69676515 -15761965 - AluJo SINE Alu -26 286 90 975 209 21 11 chr17 69676534 69676725 -15761755 + AluJb SINE Alu 1 193 -119 5146 100 82 108 chr17 69676728 69678284 -15760196 - pTR5 LTR ERV1 0 2438 745 690 133 0 47 chr17 69678284 69678412 -15760068 + AluJb SINE Alu 188 309 -3 510 150 12 0 chr17 69678413 69678493 -15759987 + AluS SINE Alu 2 82 -231 181 173 13 13 chr17 69678498 69678573 -15759907 + (TA)n Simple_repeat Simple_repeat 1 75 0 2253 122 0 3 chr17 69678574 69678885 -15759595 - AluSq SINE Alu -3 310 1 1707 155 55 3 chr17 69679432 69679723 -15758757 + AluJb SINE Alu 1 306 -6 2324 102 6 13 chr17 69680046 69680361 -15758119 - AluSq SINE Alu 0 313 1 2202 119 0 0 chr17 69680364 69680657 -15757823 - AluSx SINE Alu -19 293 1 2041 125 21 3 chr17 69680915 69681203 -15757277 + AluSq SINE Alu 1 293 -20 2207 119 0 0 chr17 69681203 69681496 -15756984 + AluSx SINE Alu 1 293 -19 2298 105 3 0 chr17 69681499 69681795 -15756685 + AluSq SINE Alu 1 297 -16 2681 40 0 0 chr17 69681965 69682267 -15756213 + AluY SINE Alu 1 302 -9 1285 245 37 78 chr17 69682355 69682452 -15756028 - MER20B DNA MER1_type 0 783 684 1134 109 58 0 chr17 69682452 69682626 -15755854 + L1PA11 LINE L1 5991 6174 0 1285 245 37 78 chr17 69682626 69683018 -15755462 - MER20B DNA MER1_type -99 684 314 1402 107 0 56 chr17 69683042 69683184 -15755296 + AluSx SINE Alu 1 129 -183 2217 94 10 7 chr17 69683184 69683482 -15754998 + AluSc SINE Alu 1 299 -10 1402 107 0 56 chr17 69683482 69683554 -15754926 + AluSx SINE Alu 129 203 -109 276 156 0 0 chr17 69683557 69683602 -15754878 + AluJb SINE Alu 72 116 -186 1209 168 0 59 chr17 69683922 69683964 -15754516 + AluJb SINE Alu 104 147 -165 2243 119 0 0 chr17 69683964 69684259 -15754221 + AluSx SINE Alu 1 295 -17 1209 168 0 59 chr17 69684259 69684436 -15754044 + AluJb SINE Alu 147 310 -2 2235 110 3 3 chr17 69684436 69684744 -15753736 + AluSg SINE Alu 1 308 -2 2221 121 3 19 chr17 69684746 69685059 -15753421 + AluSx SINE Alu 3 310 -2 227 152 114 139 chr17 69685074 69685124 -15753356 - MER20B DNA MER1_type -493 290 241 2146 157 144 28 chr17 69685124 69685582 -15752898 - MLT2B2 LTR ERVL -4 511 1 227 152 114 139 chr17 69685582 69685610 -15752870 - MER20B DNA MER1_type -542 241 214 1119 168 0 22 chr17 69685610 69685795 -15752685 + AluJb SINE Alu 1 181 -131 423 0 0 0 chr17 69685827 69685874 -15752606 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 240 191 0 0 chr17 69685906 69685948 -15752532 - MER20B DNA MER1_type -493 290 249 489 148 229 25 chr17 69685951 69686073 -15752407 - MLT2B2 LTR ERVL 0 515 369 28 29 0 0 chr17 69686073 69686108 -15752372 + AT_rich Low_complexity Low_complexity 1 35 0 2280 86 40 3 chr17 69686164 69686465 -15752015 - AluSp SINE Alu -1 312 1 880 154 181 6 chr17 69686469 69686651 -15751829 - AluJo SINE Alu -12 300 87 2366 95 0 3 chr17 69686665 69686961 -15751519 - AluSc SINE Alu -12 297 3 2009 91 14 7 chr17 69687610 69687896 -15750584 - AluSc SINE Alu -21 288 1 1821 141 38 7 chr17 69688493 69688784 -15749696 - AluJb SINE Alu -12 300 1 2139 101 0 0 chr17 69688931 69689217 -15749263 + AluSx SINE Alu 25 310 -2 822 286 128 29 chr17 69689559 69689830 -15748650 - L1MC4a LINE L1 -1917 5891 5648 2243 93 0 0 chr17 69689830 69690131 -15748349 - AluSc SINE Alu -8 301 1 822 286 128 29 chr17 69690131 69690314 -15748166 - L1MC4a LINE L1 -2160 5648 5392 414 284 53 12 chr17 69690585 69690754 -15747726 + L1ME LINE L1 5602 5777 -344 1746 99 28 0 chr17 69691137 69691390 -15747090 - AluSx SINE Alu -9 303 44 188 81 81 0 chr17 69691561 69691598 -15746882 + CT-rich Low_complexity Low_complexity 1 40 0 2131 112 7 0 chr17 69691599 69691894 -15746586 - AluSx SINE Alu -15 297 1 347 232 128 67 chr17 69691904 69692201 -15746279 - L1MC5 LINE L1 -36 7925 7611 2088 99 21 0 chr17 69692548 69692831 -15745649 - AluSc SINE Alu -20 289 1 1525 195 0 36 chr17 69693232 69693539 -15744941 - AluJo SINE Alu -6 296 1 331 246 64 27 chr17 69693678 69693788 -15744692 - MIR SINE MIR -108 154 41 2082 103 3 0 chr17 69693851 69694156 -15744324 - AluSx SINE Alu 0 306 1 479 160 0 10 chr17 69694393 69694493 -15743987 + CT-rich Low_complexity Low_complexity 4 102 0 1625 160 0 72 chr17 69694504 69694836 -15743644 - AluJo SINE Alu -4 308 1 29 0 0 0 chr17 69694878 69694907 -15743573 + AT_rich Low_complexity Low_complexity 1 29 0 1158 227 56 102 chr17 69694917 69695455 -15743025 - L1MD2 LINE L1 -4 6355 5843 1712 138 37 0 chr17 69695455 69695724 -15742756 - AluSx SINE Alu -13 299 21 360 262 33 41 chr17 69696084 69696206 -15742274 + L1ME3A LINE L1 4941 5061 -1085 2146 79 0 57 chr17 69696250 69696565 -15741915 - AluSc SINE Alu -12 297 1 1528 251 54 26 chr17 69696623 69697387 -15741093 + L1ME3A LINE L1 5026 5811 -351 1677 146 24 7 chr17 69697398 69697686 -15740794 + AluSx SINE Alu 12 304 -8 285 289 108 36 chr17 69697735 69697929 -15740551 + L1ME3A LINE L1 5962 6169 -1 1995 96 7 0 chr17 69697940 69698252 -15740228 + AluSg1 SINE Alu 6 319 0 1848 129 13 10 chr17 69698255 69698558 -15739922 + AluY SINE Alu 1 304 -7 402 227 0 0 chr17 69698760 69698892 -15739588 + (TG)n Simple_repeat Simple_repeat 1 132 0 234 105 0 0 chr17 69698944 69698982 -15739498 + (TG)n Simple_repeat Simple_repeat 1 38 0 332 299 34 3 chr17 69699265 69699375 -15739105 + MIR SINE MIR 35 152 -62 2260 107 0 0 chr17 69699390 69699699 -15738781 + AluSg SINE Alu 1 309 -1 292 258 16 0 chr17 69700326 69700338 -15738142 + GA-rich Low_complexity Low_complexity 2 12 -115 2116 97 3 0 chr17 69700338 69700626 -15737854 + AluSx SINE Alu 1 289 -23 292 258 16 0 chr17 69700626 69700706 -15737774 + GA-rich Low_complexity Low_complexity 12 99 -28 2249 92 0 19 chr17 69700706 69701022 -15737458 + AluSg SINE Alu 1 310 0 292 258 16 0 chr17 69701022 69701052 -15737428 + GA-rich Low_complexity Low_complexity 99 127 0 2075 109 3 31 chr17 69701950 69702084 -15736396 + AluSx SINE Alu 1 137 -175 2273 87 10 0 chr17 69702084 69702393 -15736087 + AluSx SINE Alu 1 312 0 2148 109 3 3 chr17 69702395 69702699 -15735781 + AluSp SINE Alu 1 304 -9 2075 109 3 31 chr17 69702699 69702882 -15735598 + AluSx SINE Alu 138 312 0 2471 91 17 0 chr17 69703134 69703486 -15734994 + L1PA13 LINE L1 5804 6161 -2 289 0 49 0 chr17 69704122 69704163 -15734317 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 2047 98 0 0 chr17 69704166 69704441 -15734039 - AluSx SINE Alu -37 275 1 1870 146 10 0 chr17 69704507 69704815 -15733665 - AluJb SINE Alu -1 311 1 318 155 309 0 chr17 69705085 69705169 -15733311 + MLT1J LTR MaLR 24 133 -378 2111 115 20 0 chr17 69705653 69705958 -15732522 - AluSx SINE Alu -1 311 1 2029 111 10 7 chr17 69706488 69706785 -15731695 - AluSx SINE Alu -14 298 1 1796 153 3 3 chr17 69707238 69707526 -15730954 + AluJb SINE Alu 1 288 -24 269 159 0 0 chr17 69707527 69707571 -15730909 + AluSx SINE Alu 1 44 -258 1769 130 8 0 chr17 69707685 69707946 -15730534 + AluSx SINE Alu 49 311 -1 1953 118 0 10 chr17 69708216 69708536 -15729944 + AluSx SINE Alu 1 317 0 1738 146 0 0 chr17 69708547 69708840 -15729640 + AluSx SINE Alu 16 308 0 2237 81 3 0 chr17 69708984 69709279 -15729201 + AluSp SINE Alu 3 298 -15 2233 75 3 3 chr17 69709363 69709656 -15728824 + AluY SINE Alu 5 297 -14 605 217 123 25 chr17 69709710 69709945 -15728535 + LTR37B LTR ERV1 198 455 -13 2369 68 0 0 chr17 69709956 69710251 -15728229 + AluSg1 SINE Alu 2 296 -13 1638 181 7 10 chr17 69710251 69710554 -15727926 - L1MB5 LINE L1 -9 6165 5864 271 215 172 32 chr17 69710606 69710619 -15727861 - L1MB5 LINE L1 -294 5884 5874 1717 178 10 7 chr17 69710619 69710928 -15727552 - AluJb SINE Alu -2 310 1 271 215 172 32 chr17 69710928 69711007 -15727473 - L1MB5 LINE L1 -304 5874 5779 2230 91 3 0 chr17 69711009 69711307 -15727173 - AluSx SINE Alu -13 299 1 2121 120 0 3 chr17 69711606 69711915 -15726565 - AluSx SINE Alu -4 308 1 2095 117 0 10 chr17 69712200 69712507 -15725973 - AluSg SINE Alu -6 304 1 1989 116 7 3 chr17 69712671 69712965 -15725515 - AluSx SINE Alu -17 295 1 1534 148 35 45 chr17 69713392 69713682 -15724798 + AluJo SINE Alu 1 287 -25 2106 99 0 0 chr17 69713693 69713996 -15724484 + AluSx SINE Alu 1 303 0 2283 64 0 0 chr17 69714026 69714345 -15724135 + AluY SINE Alu 1 319 0 301 215 38 13 chr17 69714448 69714527 -15723953 + L1MD3 LINE L1 7903 7983 -12 2269 183 23 82 chr17 69714538 69714629 -15723851 + L1MB4 LINE L1 5644 5739 -441 2299 100 0 0 chr17 69714629 69714939 -15723541 + AluSx SINE Alu 1 310 -2 2269 183 23 82 chr17 69714939 69715277 -15723203 + L1MB4 LINE L1 5739 6095 -85 2264 61 27 0 chr17 69715277 69715571 -15722909 + AluSp SINE Alu 1 302 -11 2269 183 23 82 chr17 69715571 69715660 -15722820 + L1MB4 LINE L1 6095 6130 -50 2222 106 0 0 chr17 69715660 69715962 -15722518 + AluSp SINE Alu 3 304 -9 2269 183 23 82 chr17 69715962 69716004 -15722476 + L1MB4 LINE L1 6130 6173 -7 1383 184 28 25 chr17 69716031 69716120 -15722360 - AluJb SINE Alu -20 292 205 3142 154 9 75 chr17 69716120 69716146 -15722334 + LTR9 LTR ERV1 2 28 -584 2014 104 22 0 chr17 69716146 69716447 -15722033 + AluSx SINE Alu 1 307 0 3142 154 9 75 chr17 69716447 69717073 -15721407 + LTR9 LTR ERV1 28 612 0 1383 184 28 25 chr17 69717073 69717266 -15721214 - AluJb SINE Alu -107 205 9 610 299 30 0 chr17 69717533 69717697 -15720783 + LTR16A LTR ERVL 268 436 -14 2358 269 120 107 chr17 69717728 69717917 -15720563 + HERV16 LTR ERVL 1 186 -4810 2106 114 18 99 chr17 69717917 69718130 -15720350 - THE1B LTR MaLR -2 362 194 2206 91 0 0 chr17 69718130 69718416 -15720064 - AluSg SINE Alu -24 286 1 2106 114 18 99 chr17 69718416 69718596 -15719884 - THE1B LTR MaLR -170 194 1 11056 90 37 23 chr17 69718596 69720155 -15718325 - THE1B-int LTR MaLR 0 1580 1 2061 119 43 62 chr17 69720155 69720228 -15718252 - THE1B LTR MaLR 0 364 291 2172 123 0 0 chr17 69720228 69720529 -15717951 + AluSx SINE Alu 1 301 -11 2061 119 43 62 chr17 69720529 69720826 -15717654 - THE1B LTR MaLR -73 291 1 2358 269 120 107 chr17 69720826 69720865 -15717615 + HERV16 LTR ERVL 186 223 -4773 2057 96 3 60 chr17 69720865 69721197 -15717283 + AluSq SINE Alu 1 313 0 2358 269 120 107 chr17 69721197 69721556 -15716924 + HERV16 LTR ERVL 223 576 -4420 2127 98 40 0 chr17 69721556 69721853 -15716627 + AluY SINE Alu 1 309 -2 2358 269 120 107 chr17 69721853 69722197 -15716283 + HERV16 LTR ERVL 576 914 -4082 1399 157 85 111 chr17 69722197 69722657 -15715823 - LTR7 LTR ERV1 -2 448 1 1729 219 36 28 chr17 69722661 69723054 -15715426 - MSTD LTR MaLR 0 396 1 2358 269 120 107 chr17 69723054 69723223 -15715257 + HERV16 LTR ERVL 916 1081 -3915 439 100 43 0 chr17 69723223 69723293 -15715187 + LTR5 LTR ERVK 1 73 -896 6307 88 2 3 chr17 69723293 69724149 -15714331 + LTR5 LTR ERVK 115 969 0 2358 269 120 107 chr17 69724149 69724488 -15713992 + HERV16 LTR ERVL 1081 1414 -3582 2136 118 10 0 chr17 69724488 69724793 -15713687 + AluSx SINE Alu 1 308 -4 2358 269 120 107 chr17 69724793 69725301 -15713179 + HERV16 LTR ERVL 1414 2065 -2931 2353 88 0 0 chr17 69725301 69725608 -15712872 + AluSc SINE Alu 1 307 -2 2358 269 120 107 chr17 69725608 69725773 -15712707 + HERV16 LTR ERVL 2065 2226 -2770 261 0 0 0 chr17 69725787 69725816 -15712664 + (T)n Simple_repeat Simple_repeat 1 29 0 521 240 20 27 chr17 69725816 69725966 -15712514 - LTR28 LTR ERV1 -515 505 357 315 0 0 0 chr17 69726058 69726093 -15712387 + (T)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr17 69726199 69726222 -15712258 + AT_rich Low_complexity Low_complexity 1 23 0 1566 122 37 4 chr17 69726292 69726566 -15711914 - AluSx SINE Alu 0 311 30 2324 83 3 0 chr17 69726871 69727173 -15711307 - AluSp SINE Alu -10 303 1 1889 117 18 3 chr17 69727282 69727565 -15710915 + AluSg1 SINE Alu 1 287 -22 329 319 128 32 chr17 69727660 69727911 -15710569 - L2 LINE L2 -483 2831 2557 298 118 78 0 chr17 69728045 69728096 -15710384 + MADE1 DNA Mariner 1 55 -25 27 49 0 0 chr17 69729225 69729266 -15709214 + GC_rich Low_complexity Low_complexity 1 41 0 30 77 0 0 chr17 69729937 69730002 -15708478 + GC_rich Low_complexity Low_complexity 1 65 0 28 61 0 0 chr17 69730185 69730234 -15708246 + GC_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr17 69732569 69732592 -15705888 + AT_rich Low_complexity Low_complexity 1 23 0 360 287 23 0 chr17 69732637 69732724 -15705756 + L1MC4 LINE L1 6615 6703 -1339 254 135 39 0 chr17 69732735 69732787 -15705693 + (TATG)n Simple_repeat Simple_repeat 3 56 0 2227 83 20 3 chr17 69732797 69733099 -15705381 - AluSq SINE Alu -6 307 1 363 311 124 44 chr17 69735215 69735440 -15703040 - MIR SINE MIR 0 262 20 408 278 0 0 chr17 69735450 69735540 -15702940 - MIR3 SINE MIR -50 158 69 25 0 0 28 chr17 69736524 69736539 -15701941 + AT_rich Low_complexity Low_complexity 1 15 -20 2251 92 0 14 chr17 69736539 69736833 -15701647 - AluSq SINE Alu -23 290 1 25 0 0 28 chr17 69736833 69736853 -15701627 + AT_rich Low_complexity Low_complexity 15 35 0 2249 111 0 19 chr17 69736853 69737169 -15701311 - AluSg SINE Alu 0 310 1 2214 114 3 0 chr17 69737227 69737526 -15700954 - AluSq SINE Alu -13 300 1 218 222 16 0 chr17 69737872 69737935 -15700545 + (TAAA)n Simple_repeat Simple_repeat 1 64 0 1396 102 233 13 chr17 69737939 69738175 -15700305 - AluSg1 SINE Alu -21 288 1 408 334 153 18 chr17 69738746 69739084 -15699396 - L1ME LINE L1 -409 5712 5325 1188 48 14 7 chr17 69739173 69739318 -15699162 + AluY SINE Alu 1 146 -165 1901 122 0 0 chr17 69739421 69739675 -15698805 - AluSc SINE Alu -52 257 4 510 191 48 24 chr17 69739680 69739848 -15698632 - L1ME LINE L1 -866 5280 5109 786 202 101 48 chr17 69740258 69740506 -15697974 + MIR SINE MIR 2 262 0 582 236 151 60 chr17 69741165 69741601 -15696879 - MLT1K LTR MaLR 0 476 1 2346 91 0 3 chr17 69741892 69742189 -15696291 - AluSx SINE Alu -16 296 1 2418 51 0 42 chr17 69742381 69742692 -15695788 - AluY SINE Alu -13 298 1 1489 173 26 23 chr17 69743517 69743824 -15694656 + AluJo SINE Alu 1 308 -4 793 260 70 0 chr17 69743883 69744125 -15694355 - MIR SINE MIR -1 261 3 764 193 88 31 chr17 69744317 69744509 -15693971 + MER20 DNA MER1_type 2 204 -15 1688 167 0 30 chr17 69744865 69745164 -15693316 + AluJb SINE Alu 1 290 -22 297 241 175 58 chr17 69746200 69746337 -15692143 + L2 LINE L2 3161 3313 0 3986 253 98 54 chr17 69747258 69747425 -15691055 - L2 LINE L2 0 3313 3155 2153 114 6 25 chr17 69747425 69747741 -15690739 + AluSg SINE Alu 1 310 0 3986 253 98 54 chr17 69747741 69749538 -15688942 - L2 LINE L2 -158 3155 1266 338 303 78 0 chr17 69750927 69751069 -15687411 - MIR SINE MIR -10 252 100 2375 71 10 0 chr17 69751108 69751402 -15687078 - AluSq SINE Alu -15 298 2 385 250 134 9 chr17 69751405 69751517 -15686963 - MIR SINE MIR -51 211 86 404 270 140 15 chr17 69751803 69752003 -15686477 + L1ME4a LINE L1 5677 5901 -220 27 29 0 0 chr17 69752246 69752280 -15686200 + AT_rich Low_complexity Low_complexity 1 34 0 2019 137 10 0 chr17 69753298 69753598 -15684882 - AluJb SINE Alu -1 311 9 864 203 18 6 chr17 69753936 69754099 -15684381 - FAM SINE Alu -9 166 2 21 0 0 0 chr17 69754394 69754415 -15684065 + AT_rich Low_complexity Low_complexity 1 21 0 1891 128 26 26 chr17 69755688 69755992 -15682488 - AluJb SINE Alu -8 304 1 450 343 59 59 chr17 69756309 69756633 -15681847 - L2 LINE L2 -19 3253 2930 512 42 0 167 chr17 69756880 69756937 -15681543 - MADE1 DNA Mariner 0 80 44 2326 107 0 0 chr17 69756937 69757237 -15681243 + AluSx SINE Alu 3 302 -10 512 42 0 167 chr17 69757237 69757275 -15681205 - MADE1 DNA Mariner -36 44 1 21 36 0 0 chr17 69757448 69757476 -15681004 + AT_rich Low_complexity Low_complexity 1 28 0 187 194 0 0 chr17 69758815 69758851 -15679629 - L2 LINE L2 -16 3256 3221 2120 137 45 28 chr17 69759041 69759399 -15679081 - THE1B LTR MaLR 0 364 1 380 321 76 55 chr17 69759471 69759761 -15678719 - L2 LINE L2 -706 2608 2313 531 213 0 0 chr17 69759764 69759905 -15678575 + (TCCA)n Simple_repeat Simple_repeat 1 141 0 281 250 14 42 chr17 69759907 69759979 -15678501 - L2 LINE L2 -3 3269 3200 2465 93 3 0 chr17 69760296 69760608 -15677872 + AluSq SINE Alu 1 313 0 203 366 0 30 chr17 69761209 69761310 -15677170 - L3 LINE CR1 -1 1576 1479 190 283 65 0 chr17 69761458 69761504 -15676976 - L2 LINE L2 -16 3256 3208 284 251 91 21 chr17 69761530 69761643 -15676837 - MIR SINE MIR -52 156 37 2125 133 3 3 chr17 69762704 69763012 -15675468 - AluSg SINE Alu -2 308 1 2155 137 0 7 chr17 69763073 69763379 -15675101 - AluJb SINE Alu 0 312 9 366 210 186 24 chr17 69763601 69763725 -15674755 + L1MC5 LINE L1 7764 7907 -54 22 35 0 0 chr17 69763731 69763760 -15674720 + AT_rich Low_complexity Low_complexity 1 29 0 2151 128 0 0 chr17 69763768 69764066 -15674414 + AluSx SINE Alu 1 298 -14 1399 125 9 26 chr17 69764070 69764302 -15674178 + AluSg/x SINE Alu 84 311 -1 327 287 155 35 chr17 69764404 69764578 -15673902 + MIR3 SINE MIR 5 199 -9 1461 75 5 5 chr17 69764786 69764973 -15673507 + AluSq SINE Alu 108 294 -19 1918 145 3 0 chr17 69765731 69766021 -15672459 - AluSx SINE Alu -21 291 1 224 279 353 0 chr17 69766138 69766274 -15672206 + L2 LINE L2 3129 3312 -1 616 138 106 57 chr17 69766342 69766465 -15672015 + AluSq/x SINE Alu 1 129 -184 2341 88 0 7 chr17 69766482 69766790 -15671690 + AluSg1 SINE Alu 3 308 -1 1097 198 28 0 chr17 69770364 69770576 -15667904 - MER58A DNA MER1_type -6 218 1 27 0 0 0 chr17 69770828 69770855 -15667625 + AT_rich Low_complexity Low_complexity 1 27 0 487 318 120 9 chr17 69771023 69771240 -15667240 + MIR SINE MIR 21 261 -1 181 56 28 28 chr17 69771316 69771352 -15667128 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 27 0 0 0 chr17 69772546 69772573 -15665907 + AT_rich Low_complexity Low_complexity 1 27 0 1802 151 0 57 chr17 69772638 69772971 -15665509 - AluJo SINE Alu 0 316 1 181 381 0 0 chr17 69774467 69774530 -15663950 - L2 LINE L2 -8 3264 3202 2075 134 0 10 chr17 69775029 69775328 -15663152 - AluSx SINE Alu -16 296 1 373 155 0 0 chr17 69775921 69775992 -15662488 - L1MA3 LINE L1 0 6305 6235 1911 135 3 17 chr17 69776412 69776586 -15661894 - AluSx SINE Alu 0 306 136 2202 98 3 7 chr17 69776586 69776891 -15661589 - AluY SINE Alu -6 305 2 1911 135 3 17 chr17 69776891 69777026 -15661454 - AluSx SINE Alu -170 136 1 803 181 0 0 chr17 69777153 69777286 -15661194 - FLAM_C SINE Alu 0 133 1 22 80 0 0 chr17 69778471 69778521 -15659959 + AT_rich Low_complexity Low_complexity 1 50 0 222 318 76 0 chr17 69778966 69779032 -15659448 + L2 LINE L2 3152 3222 -50 210 352 130 9 chr17 69779035 69779143 -15659337 - L2 LINE L2 -5 3267 3147 29 47 0 0 chr17 69780031 69780074 -15658406 + AT_rich Low_complexity Low_complexity 1 43 0 1380 173 105 11 chr17 69780235 69780512 -15657968 + AluJo SINE Alu 1 303 -9 1538 164 10 31 chr17 69780642 69780934 -15657546 - AluJb SINE Alu -26 286 1 524 253 125 28 chr17 69781090 69781410 -15657070 + L1ME4a LINE L1 5768 6118 -3 448 206 20 0 chr17 69782158 69782260 -15656220 - MER58C DNA MER1_type 0 215 112 2227 114 7 0 chr17 69782665 69782971 -15655509 - AluSq SINE Alu -5 308 1 707 179 0 0 chr17 69783049 69783155 -15655325 + FRAM SINE Alu 39 144 -32 21 57 0 0 chr17 69783256 69783291 -15655189 + AT_rich Low_complexity Low_complexity 1 35 0 2075 123 13 3 chr17 69784581 69784883 -15653597 + AluJo SINE Alu 1 305 -7 364 333 17 129 chr17 69785020 69785355 -15653125 - L2 LINE L2 0 3272 3003 2135 98 0 3 chr17 69785355 69785665 -15652815 + AluSq SINE Alu 1 309 0 364 333 17 129 chr17 69785665 69785802 -15652678 - L2 LINE L2 -269 3003 2852 408 325 148 29 chr17 69785837 69786250 -15652230 - L2 LINE L2 -601 2713 2252 1916 144 3 10 chr17 69786646 69786945 -15651535 - AluSx SINE Alu -15 297 1 1901 168 7 0 chr17 69787108 69787418 -15651062 + AluJb SINE Alu 1 312 0 2303 95 0 0 chr17 69787594 69787890 -15650590 - AluSx SINE Alu -13 299 4 1608 87 24 0 chr17 69787920 69788128 -15650352 - AluSg/x SINE Alu -26 286 74 2783 234 37 20 chr17 69788128 69788804 -15649676 + MSTD-int LTR MaLR 996 1735 0 1890 207 26 13 chr17 69788804 69789195 -15649285 + MSTD LTR MaLR 1 396 0 2064 133 0 10 chr17 69789318 69789626 -15648854 - AluSx SINE Alu -7 305 1 2225 102 14 0 chr17 69790159 69790454 -15648026 + AluSx SINE Alu 3 301 -11 334 216 59 10 chr17 69791549 69791651 -15646829 + MIR SINE MIR 120 226 -36 1236 214 41 28 chr17 69792283 69792573 -15645907 - AluJo SINE Alu -12 300 7 21 0 0 0 chr17 69792579 69792600 -15645880 + AT_rich Low_complexity Low_complexity 1 21 0 258 130 22 0 chr17 69792875 69792921 -15645559 - MLT1J2 LTR MaLR -45 405 359 632 268 30 6 chr17 69792947 69793115 -15645365 - MLT1J1 LTR MaLR -153 293 122 225 310 97 55 chr17 69793440 69793585 -15644895 + L2 LINE L2 2606 2756 -558 933 132 69 0 chr17 69793815 69793989 -15644491 - L1MB2 LINE L1 -2 6169 5984 218 255 0 0 chr17 69794135 69794182 -15644298 - L2 LINE L2 -9 3304 3258 698 145 34 0 chr17 69794615 69794732 -15643748 + FLAM_C SINE Alu 14 134 -9 2441 57 0 14 chr17 69794734 69795031 -15643449 + AluY SINE Alu 1 293 -18 373 274 59 22 chr17 69795247 69795382 -15643098 - MIR SINE MIR 0 262 123 22 0 0 0 chr17 69795683 69795705 -15642775 + AT_rich Low_complexity Low_complexity 1 22 0 725 190 0 0 chr17 69796181 69796302 -15642178 - FLAM_C SINE Alu -22 121 1 2590 122 41 24 chr17 69801179 69801596 -15636884 - MSTB LTR MaLR 0 426 3 259 263 10 10 chr17 69801653 69801752 -15636728 - L2 LINE L2 -1039 2275 2177 353 289 139 31 chr17 69801752 69802105 -15636375 - L2 LINE L2 -1240 2074 1684 21 0 0 0 chr17 69802215 69802236 -15636244 + AT_rich Low_complexity Low_complexity 1 21 0 193 192 64 0 chr17 69802399 69802524 -15635956 + (TA)n Simple_repeat Simple_repeat 1 133 0 2041 111 0 0 chr17 69802577 69802847 -15635633 - AluSx SINE Alu -8 304 35 920 238 88 83 chr17 69802862 69803443 -15635037 - HAL1 LINE L1 -352 2155 1572 27 22 0 22 chr17 69803970 69803998 -15634482 + AT_rich Low_complexity Low_complexity 1 29 -15 2011 144 0 3 chr17 69803998 69804290 -15634190 - AluSx SINE Alu -21 291 1 27 22 0 22 chr17 69804290 69804306 -15634174 + AT_rich Low_complexity Low_complexity 29 44 0 383 287 61 0 chr17 69804779 69804894 -15633586 - MIR SINE MIR -33 229 108 2651 260 161 45 chr17 69804983 69806121 -15632359 + L2 LINE L2 1374 2681 -633 663 263 44 24 chr17 69806121 69806326 -15632154 - MER63A DNA MER1_type 0 210 2 2651 260 161 45 chr17 69806326 69806480 -15632000 + L2 LINE L2 2681 2816 -498 183 156 0 0 chr17 69806538 69806570 -15631910 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 973 201 55 46 chr17 69807448 69807667 -15630813 + MER58A DNA MER1_type 3 223 -1 1872 141 33 10 chr17 69808007 69808312 -15630168 + AluJb SINE Alu 1 312 0 3353 142 214 47 chr17 69810065 69810686 -15627794 - MER21A LTR ERV1 0 931 149 1643 155 0 22 chr17 69810686 69810963 -15627517 + AluJo SINE Alu 35 305 -7 3353 142 214 47 chr17 69810963 69811129 -15627351 - MER21A LTR ERV1 -782 149 12 236 200 0 0 chr17 69811129 69811179 -15627301 + (TA)n Simple_repeat Simple_repeat 1 50 0 471 270 47 6 chr17 69811438 69811596 -15626884 - L1ME3A LINE L1 -20 6150 5982 1898 152 31 22 chr17 69811888 69812210 -15626270 - MER7A DNA MER2_type -23 323 1 21 0 0 0 chr17 69812220 69812241 -15626239 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 69813935 69813958 -15624522 + AT_rich Low_complexity Low_complexity 1 23 0 1755 176 23 26 chr17 69814803 69815110 -15623370 - AluJo SINE Alu -6 306 1 392 220 18 18 chr17 69815266 69815375 -15623105 - L1M4c LINE L1 -3652 3305 3197 1787 146 0 14 chr17 69815375 69815662 -15622818 + AluJb SINE Alu 1 283 -29 25 0 0 0 chr17 69815662 69815687 -15622793 + AT_rich Low_complexity Low_complexity 1 25 0 968 227 24 67 chr17 69815687 69815909 -15622571 - L1M4c LINE L1 -3747 3210 2980 1828 154 0 4 chr17 69815909 69816189 -15622291 - AluJo SINE Alu -11 301 23 968 227 24 67 chr17 69816189 69816377 -15622103 - L1M4c LINE L1 -3977 2980 2825 2155 129 3 0 chr17 69816377 69816671 -15621809 - AluSx SINE Alu -15 297 3 968 227 24 67 chr17 69816671 69816845 -15621635 - L1M4c LINE L1 -4132 2825 2645 37 39 0 0 chr17 69816972 69817023 -15621457 + AT_rich Low_complexity Low_complexity 1 51 0 2418 253 48 19 chr17 69817110 69818018 -15620462 - L1M4c LINE L1 -4434 2704 1629 441 299 119 40 chr17 69818627 69818905 -15619575 - L1M4c LINE L1 -6544 315 16 39 0 0 0 chr17 69819306 69819345 -15619135 + AT_rich Low_complexity Low_complexity 1 39 0 521 262 135 75 chr17 69820935 69821282 -15617198 + L3 LINE CR1 937 1304 -273 284 247 161 0 chr17 69821362 69821443 -15617037 + L3 LINE CR1 1461 1554 -23 3971 149 23 6 chr17 69821461 69822145 -15616335 - L1MB3 LINE L1 -1 6182 5487 853 225 83 88 chr17 69822656 69823042 -15615438 - L2 LINE L2 -3 3310 2927 23 54 0 0 chr17 69823870 69823907 -15614573 + AT_rich Low_complexity Low_complexity 1 37 0 2258 99 0 3 chr17 69824037 69824329 -15614151 - AluSp SINE Alu -17 296 6 1959 146 24 0 chr17 69824621 69824916 -15613564 + AluJb SINE Alu 1 302 -10 659 284 93 13 chr17 69825744 69825969 -15612511 - MIR SINE MIR 0 262 20 261 0 0 0 chr17 69826188 69826217 -15612263 + (CA)n Simple_repeat Simple_repeat 2 30 0 629 224 67 15 chr17 69826723 69826857 -15611623 - MIR SINE MIR -117 145 5 1548 178 20 34 chr17 69827248 69827546 -15610934 + AluJo SINE Alu 1 294 -18 31 58 0 0 chr17 69828045 69828097 -15610383 + AT_rich Low_complexity Low_complexity 1 52 0 1086 163 0 0 chr17 69828097 69828275 -15610205 - L1PB3 LINE L1 -2 6152 5975 23 101 0 0 chr17 69828575 69828654 -15609826 + AT_rich Low_complexity Low_complexity 1 79 0 261 240 20 30 chr17 69828982 69829082 -15609398 + L1MC4 LINE L1 6605 6703 -1339 189 245 0 0 chr17 69829086 69829135 -15609345 + (TA)n Simple_repeat Simple_repeat 1 49 0 1907 131 21 0 chr17 69830580 69830870 -15607610 - AluJb SINE Alu -16 296 1 185 294 0 88 chr17 69831116 69831184 -15607296 - L2 LINE L2 -18 3295 3234 458 298 8 8 chr17 69831337 69831461 -15607019 + L2 LINE L2 3190 3313 0 1728 133 39 7 chr17 69831570 69831726 -15606754 - AluSx SINE Alu -24 288 118 189 0 0 0 chr17 69831726 69831747 -15606733 + (TG)n Simple_repeat Simple_repeat 2 22 0 1728 133 39 7 chr17 69831747 69831869 -15606611 - AluSx SINE Alu -194 118 1 2895 204 35 10 chr17 69832177 69832786 -15605694 - MLT1E2 LTR MaLR -2 624 1 540 0 0 0 chr17 69833089 69833149 -15605331 + (TA)n Simple_repeat Simple_repeat 1 60 0 585 281 114 4 chr17 69833616 69833897 -15604583 - L1ME LINE L1 -297 5824 5513 279 0 0 0 chr17 69834589 69834620 -15603860 + (CA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr17 69835097 69835119 -15603361 + AT_rich Low_complexity Low_complexity 1 22 0 2072 115 10 45 chr17 69835707 69835877 -15602603 - AluSq SINE Alu -10 303 147 2258 88 0 3 chr17 69835877 69836172 -15602308 - AluY SINE Alu -17 294 1 2072 115 10 45 chr17 69836172 69836315 -15602165 - AluSq SINE Alu -166 147 1 39 88 0 0 chr17 69836327 69836429 -15602051 + AT_rich Low_complexity Low_complexity 1 102 0 2370 57 0 4 chr17 69838162 69838442 -15600038 + AluY SINE Alu 31 309 -2 3545 194 66 36 chr17 69838801 69839730 -15598750 - L1ME1 LINE L1 -5 6230 5330 808 169 0 22 chr17 69839730 69839866 -15598614 - FLAM_A SINE Alu 0 133 1 3545 194 66 36 chr17 69839866 69840585 -15597895 - L1ME1 LINE L1 -905 5330 4530 2266 104 0 3 chr17 69840585 69840883 -15597597 + AluSx SINE Alu 1 297 -15 3545 194 66 36 chr17 69840883 69840922 -15597558 - L1ME1 LINE L1 -1705 4530 4494 4088 253 50 17 chr17 69840937 69841281 -15597199 - L1ME1 LINE L1 -3119 3096 2765 2226 101 7 3 chr17 69841281 69841579 -15596901 + AluSq SINE Alu 1 299 -14 4088 253 50 17 chr17 69841579 69841923 -15596557 - L1ME1 LINE L1 -3450 2765 2434 252 0 0 0 chr17 69841923 69841951 -15596529 + (TG)n Simple_repeat Simple_repeat 2 29 0 4088 253 50 17 chr17 69841951 69843302 -15595178 - L1ME1 LINE L1 -3781 2434 1029 2382 56 0 3 chr17 69844884 69845169 -15593311 + AluY SINE Alu 9 292 -19 206 361 54 45 chr17 69845466 69845779 -15592701 + L2 LINE L2 1945 2260 -1054 358 333 86 6 chr17 69847346 69847508 -15590972 + L2 LINE L2 2889 3063 -209 983 220 31 0 chr17 69847581 69847772 -15590708 - MER58A DNA MER1_type 0 224 28 2281 109 0 3 chr17 69848067 69848369 -15590111 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr17 69848566 69848588 -15589892 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17 69850302 69850330 -15588150 + AT_rich Low_complexity Low_complexity 1 28 0 2497 62 3 0 chr17 69851830 69852138 -15586342 + AluY SINE Alu 2 310 -1 1153 165 79 34 chr17 69852812 69853079 -15585401 - L1MB7 LINE L1 -25 6657 6379 4672 184 57 34 chr17 69853098 69853289 -15585191 - L1MB7 LINE L1 -531 6141 5956 2070 98 10 46 chr17 69853289 69853596 -15584884 - AluSx SINE Alu -16 296 1 4672 184 57 34 chr17 69853596 69853982 -15584498 - L1MB7 LINE L1 -716 5956 5580 2257 80 0 17 chr17 69853982 69854283 -15584197 - AluY SINE Alu -15 296 1 4672 184 57 34 chr17 69854283 69855173 -15583307 - L1MB7 LINE L1 -1092 5580 4641 530 239 29 7 chr17 69855183 69855321 -15583159 - L1MB7 LINE L1 -6400 142 2 193 179 18 18 chr17 69857274 69857301 -15581179 + CT-rich Low_complexity Low_complexity 2 28 -29 2373 76 0 32 chr17 69857301 69857617 -15580863 - AluY SINE Alu -5 306 1 193 179 18 18 chr17 69857617 69857645 -15580835 + CT-rich Low_complexity Low_complexity 27 57 0 190 125 0 62 chr17 69859265 69859329 -15579151 + (GAAAA)n Simple_repeat Simple_repeat 4 63 0 2165 104 0 29 chr17 69859674 69859983 -15578497 - AluSx SINE Alu -12 300 1 304 262 184 18 chr17 69860056 69860224 -15578256 - MIR3 SINE MIR -9 199 4 12777 110 32 71 chr17 69861019 69862889 -15575591 + Tigger1 DNA MER2_type 3 1776 -642 1521 163 10 58 chr17 69862889 69863183 -15575297 - AluJb SINE Alu -30 282 3 12777 110 32 71 chr17 69863183 69863528 -15574952 + Tigger1 DNA MER2_type 1776 2133 -285 921 174 0 0 chr17 69863643 69863787 -15574693 - FAM SINE Alu -36 149 6 1100 144 0 28 chr17 69863794 69863975 -15574505 + Tigger1 DNA MER2_type 2243 2418 0 180 0 0 0 chr17 69864027 69864047 -15574433 + (TC)n Simple_repeat Simple_repeat 1 20 0 269 100 0 25 chr17 69864047 69864079 -15574401 + Tigger1 DNA MER2_type 2386 2418 0 189 0 0 0 chr17 69864081 69864102 -15574378 + (TC)n Simple_repeat Simple_repeat 2 22 0 1414 201 7 7 chr17 69864102 69864376 -15574104 - AluJb SINE Alu -18 294 21 412 173 0 25 chr17 69864378 69864459 -15574021 - L1PA15 LINE L1 -8 6157 6079 512 254 37 0 chr17 69864648 69864782 -15573698 - L2 LINE L2 -686 2628 2490 515 243 20 20 chr17 69864788 69864936 -15573544 - MER3 DNA MER1_type -61 148 1 554 250 76 98 chr17 69864948 69865457 -15573023 - HAL1 LINE L1 -1180 1327 829 2103 112 3 10 chr17 69865457 69865752 -15572728 - AluSx SINE Alu -19 293 1 554 250 76 98 chr17 69865752 69865794 -15572686 - HAL1 LINE L1 -1678 829 788 360 300 183 40 chr17 69865952 69866252 -15572228 - HAL1 LINE L1 -2112 395 53 307 273 163 6 chr17 69866613 69866785 -15571695 + L1ME4a LINE L1 5758 5956 -165 827 242 45 30 chr17 69866890 69867159 -15571321 - L1MC5 LINE L1 -729 7232 6960 4485 234 43 40 chr17 69867281 69868697 -15569783 + L1M4 LINE L1 2906 4325 -1821 462 61 0 0 chr17 69868700 69868766 -15569714 + (TC)n Simple_repeat Simple_repeat 1 66 0 198 0 0 0 chr17 69868766 69868788 -15569692 + (TA)n Simple_repeat Simple_repeat 1 22 0 264 400 45 5 chr17 69869522 69869722 -15568758 + L3 LINE CR1 630 837 -740 22 35 0 0 chr17 69870271 69870300 -15568180 + AT_rich Low_complexity Low_complexity 1 29 0 577 275 133 23 chr17 69870304 69870522 -15567958 - MIR SINE MIR -19 243 2 325 336 137 0 chr17 69871018 69871164 -15567316 - MIR3 SINE MIR -13 195 30 510 86 0 0 chr17 69871771 69871852 -15566628 + (TA)n Simple_repeat Simple_repeat 2 82 0 1902 126 29 4 chr17 69871852 69872130 -15566350 - AluSq SINE Alu -28 285 1 22 35 0 0 chr17 69872861 69872890 -15565590 + AT_rich Low_complexity Low_complexity 1 29 0 2042 146 0 10 chr17 69872991 69873299 -15565181 - AluJb SINE Alu -7 305 1 1760 134 51 4 chr17 69873309 69873585 -15564895 - AluSx SINE Alu -10 302 14 2667 29 0 3 chr17 69873745 69874055 -15564425 - AluY SINE Alu -2 309 1 2083 104 47 0 chr17 69874777 69875076 -15563404 - AluSq SINE Alu 0 313 1 2379 107 0 0 chr17 69875279 69875588 -15562892 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr17 69875688 69875709 -15562771 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr17 69875854 69875884 -15562596 + AT_rich Low_complexity Low_complexity 1 30 0 220 224 0 60 chr17 69876354 69876421 -15562059 + MIR SINE MIR 193 255 -7 184 342 63 13 chr17 69876806 69876885 -15561595 - L2 LINE L2 -75 3197 3115 757 280 124 61 chr17 69877096 69877571 -15560909 - MLT1J LTR MaLR 0 511 7 271 301 114 24 chr17 69877737 69877860 -15560620 + L2 LINE L2 3172 3305 -8 453 359 70 32 chr17 69877995 69878366 -15560114 + L1ME4a LINE L1 4668 5052 -1094 286 289 140 52 chr17 69878521 69878829 -15559651 + L1ME4a LINE L1 5266 5600 -521 226 240 104 10 chr17 69879087 69879183 -15559297 + L1ME4a LINE L1 6007 6111 -10 21 0 0 0 chr17 69880405 69880426 -15558054 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr17 69880638 69880669 -15557811 + AT_rich Low_complexity Low_complexity 1 31 0 28 48 0 0 chr17 69882402 69882444 -15556036 + AT_rich Low_complexity Low_complexity 1 42 0 182 114 0 29 chr17 69882970 69883005 -15555475 + (TA)n Simple_repeat Simple_repeat 1 34 0 1011 167 50 0 chr17 69885394 69885574 -15552906 - MER5A DNA MER1_type 0 189 1 2238 91 0 7 chr17 69886082 69886380 -15552100 - AluSc SINE Alu -12 297 2 21 0 0 0 chr17 69886400 69886421 -15552059 + AT_rich Low_complexity Low_complexity 1 21 0 228 295 95 19 chr17 69889312 69889417 -15549063 + L2 LINE L2 2653 2765 -549 263 330 55 9 chr17 69889712 69889821 -15548659 + L2 LINE L2 3155 3268 -4 1890 134 13 7 chr17 69891073 69891380 -15547100 - AluSx SINE Alu -3 309 1 1791 155 0 29 chr17 69891640 69891949 -15546531 - AluJo SINE Alu 0 312 13 2278 92 0 0 chr17 69892389 69892695 -15545785 + AluSc SINE Alu 1 306 -3 5684 75 16 14 chr17 69892702 69893115 -15545365 - MER4E LTR ERV1 0 766 350 2227 107 0 0 chr17 69893115 69893415 -15545065 - AluSx SINE Alu -12 300 1 5684 75 16 14 chr17 69893415 69893766 -15544714 - MER4E LTR ERV1 -416 350 1 2186 80 17 3 chr17 69893789 69894088 -15544392 - AluSq SINE Alu 0 313 11 201 321 99 0 chr17 69894119 69894200 -15544280 + L2 LINE L2 3143 3231 -41 1809 215 65 82 chr17 69894226 69894365 -15544115 + MLT1D LTR MaLR 3 143 -362 2454 50 0 3 chr17 69894365 69894667 -15543813 - AluY SINE Alu -10 301 1 1809 215 65 82 chr17 69894667 69895039 -15543441 + MLT1D LTR MaLR 143 505 0 2013 112 13 13 chr17 69895383 69895688 -15542792 + AluSq SINE Alu 1 305 -8 1992 102 25 0 chr17 69896000 69896315 -15542165 + AluSx SINE Alu 1 322 0 469 94 0 167 chr17 69897018 69897057 -15541423 + MADE1 DNA Mariner 1 16 -64 1964 123 0 35 chr17 69897057 69897367 -15541113 - AluSx SINE Alu -13 299 1 469 94 0 167 chr17 69897367 69897423 -15541057 + MADE1 DNA Mariner 16 80 0 23 0 0 0 chr17 69897458 69897481 -15540999 + AT_rich Low_complexity Low_complexity 1 23 0 2151 211 48 14 chr17 69897495 69898012 -15540468 + L1MB3 LINE L1 5648 6182 -1 1400 127 4 18 chr17 69898109 69898337 -15540143 + AluJb SINE Alu 87 311 -1 2002 81 4 0 chr17 69898409 69898669 -15539811 + AluSx SINE Alu 42 302 -10 2272 92 13 0 chr17 69899158 69899464 -15539016 + AluSx SINE Alu 3 312 0 801 163 0 15 chr17 69899533 69899668 -15538812 + FLAM_A SINE Alu 1 133 0 1855 141 0 32 chr17 69899670 69899982 -15538498 + AluJo SINE Alu 1 302 -10 808 199 123 9 chr17 69900296 69900507 -15537973 - MER58B DNA MER1_type 0 341 107 781 212 0 0 chr17 69900512 69900649 -15537831 - FLAM_C SINE Alu -4 139 3 2161 115 0 3 chr17 69900669 69900974 -15537506 - AluSg SINE Alu -6 304 1 560 244 0 0 chr17 69900992 69901107 -15537373 - MER58B DNA MER1_type -226 115 1 1866 94 6 69 chr17 69902596 69902915 -15535565 + AluJo SINE Alu 1 299 -13 350 203 0 16 chr17 69903417 69903656 -15534824 + (TG)n Simple_repeat Simple_repeat 1 235 0 345 140 20 10 chr17 69903737 69903837 -15534643 + (TG)n Simple_repeat Simple_repeat 2 102 0 869 229 60 5 chr17 69904800 69905001 -15533479 + MER20 DNA MER1_type 8 219 0 273 239 14 14 chr17 69905061 69905132 -15533348 + MER5B DNA MER1_type 104 174 -4 1104 132 0 0 chr17 69905497 69905656 -15532824 + AluSg/x SINE Alu 135 293 -17 474 282 15 26 chr17 69908998 69909172 -15529308 + MIR SINE MIR 28 202 -32 6863 203 72 18 chr17 69909172 69909929 -15528551 - L1M4c LINE L1 -4805 1841 1126 1470 174 3 76 chr17 69909929 69910246 -15528234 - AluJo SINE Alu -18 294 1 6863 203 72 18 chr17 69910246 69911217 -15527263 - L1M4c LINE L1 -5520 1126 14 241 232 58 14 chr17 69911236 69911305 -15527175 + MIR SINE MIR 191 262 0 303 28 0 0 chr17 69911744 69911780 -15526700 + (CCCTG)n Simple_repeat Simple_repeat 3 38 0 2169 110 23 0 chr17 69912613 69912914 -15525566 + AluSx SINE Alu 1 308 -4 721 256 12 0 chr17 69912953 69913117 -15525363 + MER45A DNA AcHobo 6 171 -7 302 350 85 0 chr17 69914469 69914646 -15523834 - MER113 DNA MER1_type? -45 476 285 683 302 19 5 chr17 69915156 69915368 -15523112 - MIR SINE MIR 0 262 48 198 276 157 30 chr17 69915373 69915507 -15522973 - MIR3 SINE MIR -7 201 51 191 359 94 0 chr17 69916659 69916765 -15521715 + MIR SINE MIR 34 149 -113 672 193 72 42 chr17 69916833 69916971 -15521509 + MLT1A2 LTR MaLR 2 147 -227 2618 93 31 6 chr17 69916971 69917326 -15521154 - THE1B LTR MaLR 0 364 1 672 193 72 42 chr17 69917326 69917353 -15521127 + MLT1A2 LTR MaLR 147 172 -202 2096 133 0 0 chr17 69917984 69918284 -15520196 - AluSx SINE Alu -12 300 1 253 237 97 9 chr17 69918320 69918434 -15520046 - MER113 DNA MER1_type? -359 162 39 413 309 48 6 chr17 69918495 69918660 -15519820 + MIR SINE MIR 32 203 -59 218 233 225 33 chr17 69918994 69919114 -15519366 - L2 LINE L2 -2 3311 3169 3529 162 42 22 chr17 69919159 69919752 -15518728 + MER77 LTR ERV1 1 605 0 1634 162 46 20 chr17 69920077 69920379 -15518101 - AluSx SINE Alu -1 311 2 1810 151 25 85 chr17 69920428 69920826 -15517654 + THE1C LTR MaLR 1 374 -1 464 257 187 41 chr17 69921106 69921556 -15516924 - MLT1J LTR MaLR 0 470 1 653 331 173 31 chr17 69921573 69922056 -15516424 - L2 LINE L2 -1037 2277 1864 2312 82 3 0 chr17 69922056 69922360 -15516120 - AluY SINE Alu -6 305 1 653 331 173 31 chr17 69922360 69922707 -15515773 - L2 LINE L2 -1450 1864 1568 2741 94 8 0 chr17 69922707 69923068 -15515412 - THE1B LTR MaLR 0 364 1 653 331 173 31 chr17 69923068 69923130 -15515350 - L2 LINE L2 -1746 1568 1516 2226 188 64 21 chr17 69923130 69923614 -15514866 - MLT1D LTR MaLR 0 505 1 653 331 173 31 chr17 69923614 69924217 -15514263 - L2 LINE L2 -1798 1516 567 26 30 0 0 chr17 69925036 69925069 -15513411 + AT_rich Low_complexity Low_complexity 1 33 0 189 0 0 0 chr17 69928262 69928283 -15510197 + (CA)n Simple_repeat Simple_repeat 1 21 0 787 239 42 19 chr17 69928592 69928765 -15509715 - L1MD3 LINE L1 -2 7993 7825 2110 90 0 14 chr17 69928765 69929086 -15509394 - AluSg SINE Alu 0 317 1 1995 108 7 20 chr17 69929089 69929385 -15509095 - AluSx SINE Alu -20 292 1 787 239 42 19 chr17 69929385 69929465 -15509015 - L1MD3 LINE L1 -171 7824 7729 336 318 68 0 chr17 69929493 69929625 -15508855 - L1MC/D LINE L1 -2279 5529 5389 841 263 21 0 chr17 69929625 69929819 -15508661 + MIR SINE MIR 36 233 -29 2550 52 0 0 chr17 69929854 69930164 -15508316 - AluY SINE Alu -1 310 1 2222 91 0 3 chr17 69930394 69930691 -15507789 - AluSx SINE Alu -8 304 9 299 150 41 49 chr17 69931629 69931859 -15506621 + (CA)n Simple_repeat Simple_repeat 1 228 0 461 198 28 50 chr17 69931973 69932155 -15506325 + (CA)n Simple_repeat Simple_repeat 2 179 0 299 106 45 62 chr17 69932210 69932389 -15506091 + (CA)n Simple_repeat Simple_repeat 1 176 0 733 211 123 6 chr17 69933110 69933281 -15505199 - L1MB5 LINE L1 -1 6173 5983 447 327 69 5 chr17 69933994 69934196 -15504284 + MIR SINE MIR 13 227 -35 217 235 174 41 chr17 69934378 69934476 -15504004 + MIR SINE MIR 60 170 -92 1013 234 117 62 chr17 69934476 69934559 -15503921 + MLT1C LTR MaLR 7 84 -383 2198 93 0 17 chr17 69934559 69934860 -15503620 + AluSq SINE Alu 1 296 -17 2439 78 0 0 chr17 69934861 69935170 -15503310 + AluY SINE Alu 1 309 -2 1013 234 117 62 chr17 69935170 69935519 -15502961 + MLT1C LTR MaLR 83 465 -2 1898 112 4 0 chr17 69936091 69936359 -15502121 + AluSx SINE Alu 31 299 -13 475 302 31 21 chr17 69936493 69936685 -15501795 + MER91A DNA MER1_type 3 196 0 406 241 50 64 chr17 69937105 69937220 -15501260 + L2 LINE L2 3175 3289 -24 1706 174 17 7 chr17 69937220 69937514 -15500966 - AluJo SINE Alu -15 297 1 406 241 50 64 chr17 69937514 69937539 -15500941 + L2 LINE L2 3289 3313 0 932 241 103 2 chr17 69938146 69938538 -15499942 + LTR33 LTR ERVL 14 507 -14 460 248 85 8 chr17 69938876 69939005 -15499475 - MER91C DNA MER1_type -1 139 1 2185 86 0 0 chr17 69940620 69940937 -15497543 + AluSc SINE Alu 1 317 0 1987 131 0 10 chr17 69941059 69941357 -15497123 + AluJb SINE Alu 1 295 -17 365 349 0 0 chr17 69942189 69942315 -15496165 + MIR SINE MIR 118 243 -19 2232 222 47 4 chr17 69942831 69943340 -15495140 - L1MD1 LINE L1 -5 6237 5707 382 315 219 18 chr17 69943421 69943469 -15495011 - L3 LINE CR1 -337 1240 1203 2241 119 0 0 chr17 69943469 69943781 -15494699 - AluSx SINE Alu 0 312 1 382 315 219 18 chr17 69943781 69944116 -15494364 - L3 LINE CR1 -374 1203 780 2046 131 3 0 chr17 69944616 69944913 -15493567 - AluSx SINE Alu -14 298 1 316 379 7 14 chr17 69944923 69945063 -15493417 + HAL1b LINE L1 1187 1325 -23 310 286 104 48 chr17 69945752 69945983 -15492497 + LTR16C LTR ERVL 134 377 -114 185 167 0 0 chr17 69946214 69946250 -15492230 - MIR SINE MIR -117 145 110 285 29 0 0 chr17 69946777 69946811 -15491669 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 300 210 74 25 chr17 69946837 69946918 -15491562 - L2 LINE L2 -46 3267 3183 347 263 23 33 chr17 69947833 69948018 -15490462 - MIR SINE MIR 0 262 19 1692 161 84 19 chr17 69948521 69948858 -15489622 + MLT1A1 LTR MaLR 1 588 -5 226 273 31 47 chr17 69949059 69949130 -15489350 - MIR SINE MIR -124 138 68 2517 153 12 46 chr17 69949130 69949474 -15489006 - MLT1C LTR MaLR 0 467 142 1848 106 0 4 chr17 69949474 69949728 -15488752 - AluSx SINE Alu -17 295 43 2517 153 12 46 chr17 69949728 69949865 -15488615 - MLT1C LTR MaLR -325 142 2 226 273 31 47 chr17 69949865 69949921 -15488559 - MIR SINE MIR -194 68 13 243 216 0 0 chr17 69950280 69950331 -15488149 - L2 LINE L2 -1 3271 3221 690 261 80 21 chr17 69950343 69950706 -15487774 + MLT1J2 LTR MaLR 1 388 -21 217 213 0 21 chr17 69950710 69950757 -15487723 - L2 LINE L2 -67 3205 3160 2141 131 0 0 chr17 69951238 69951543 -15486937 - AluSx SINE Alu -7 305 1 1701 186 0 3 chr17 69953416 69953706 -15484774 + AluJb SINE Alu 5 293 -19 195 100 0 0 chr17 69954287 69954317 -15484163 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 503 290 38 33 chr17 69954464 69954647 -15483833 - MIR3 SINE MIR -2 206 23 935 156 38 66 chr17 69954680 69954891 -15483589 + MER20 DNA MER1_type 5 209 -10 450 211 97 0 chr17 69954924 69955038 -15483442 - MER117 DNA MER1_type -36 161 37 660 277 60 28 chr17 69955063 69955312 -15483168 + MIR SINE MIR 6 262 0 564 253 42 6 chr17 69955539 69955705 -15482775 - MIR SINE MIR -14 248 77 341 74 0 19 chr17 69955789 69955843 -15482637 + (GA)n Simple_repeat Simple_repeat 1 53 0 2668 110 6 3 chr17 69956026 69956389 -15482091 + THE1B LTR MaLR 1 364 0 245 264 14 14 chr17 69956648 69956720 -15481760 - L3 LINE CR1 -262 1315 1244 250 277 123 36 chr17 69956769 69957071 -15481409 - L2 LINE L2 -23 3249 2842 2783 88 6 3 chr17 69957119 69957482 -15480998 - THE1B LTR MaLR 0 364 1 1899 101 34 130 chr17 69958625 69959040 -15479440 + THE1C LTR MaLR 1 375 0 225 0 0 0 chr17 69959135 69959160 -15479320 + (CCA)n Simple_repeat Simple_repeat 1 25 0 777 257 83 29 chr17 69959183 69959424 -15479056 - MIR SINE MIR 0 262 9 1371 144 93 31 chr17 69959955 69960212 -15478268 + AluJo SINE Alu 24 296 -16 207 0 0 0 chr17 69960595 69960618 -15477862 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1878 139 0 4 chr17 69960620 69960901 -15477579 - AluSx SINE Alu -32 280 1 210 360 99 21 chr17 69960917 69961250 -15477230 + L2 LINE L2 2259 2617 -697 2164 112 0 3 chr17 69961755 69962059 -15476421 + AluSx SINE Alu 1 303 -9 2216 97 0 0 chr17 69962576 69962866 -15475614 - AluSg SINE Alu -20 290 1 250 300 184 11 chr17 69963643 69963833 -15474647 - MIR SINE MIR -19 243 21 288 309 0 0 chr17 69963922 69964003 -15474477 + MIR SINE MIR 92 172 -90 1783 161 14 0 chr17 69964090 69964382 -15474098 - AluJo SINE Alu -11 301 6 2153 82 0 49 chr17 69964517 69964823 -15473657 + AluSg SINE Alu 1 291 -19 370 248 14 11 chr17 69965544 69965655 -15472825 - MER69 DNA AcHobo -3 2523 57 209 33 33 0 chr17 69966025 69966055 -15472425 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 275 287 89 85 chr17 69966178 69966460 -15472020 - L2 LINE L2 0 3272 2990 183 42 0 0 chr17 69967091 69967115 -15471365 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 387 262 33 95 chr17 69967369 69967456 -15471024 - MIR SINE MIR -51 211 120 2346 53 0 0 chr17 69967456 69967788 -15470692 + AluY SINE Alu 1 332 0 387 262 33 95 chr17 69967788 69967909 -15470571 - MIR SINE MIR -142 120 15 1371 249 146 43 chr17 69967923 69968458 -15470022 + MLT1E LTR MaLR 1 590 -3 223 330 22 0 chr17 69968575 69968666 -15469814 + MIR SINE MIR 112 204 -58 2028 221 31 11 chr17 69968820 69969276 -15469204 - MLT1C LTR MaLR 0 467 3 2058 134 0 7 chr17 69969354 69969659 -15468821 - AluSx SINE Alu -9 303 1 946 222 95 0 chr17 69970589 69970810 -15467670 + LTR33A LTR ERVL 46 287 -236 757 159 46 7 chr17 69970843 69970994 -15467486 + LTR33A LTR ERVL 363 519 -4 230 354 108 13 chr17 69971000 69971158 -15467322 - MIR SINE MIR 0 262 90 357 208 28 0 chr17 69971199 69971281 -15467199 + MIR SINE MIR 45 128 -80 894 141 43 6 chr17 69971281 69971444 -15467036 - L1MB5 LINE L1 -107 6067 5899 1519 111 47 47 chr17 69971444 69971742 -15466738 + MLT1C LTR MaLR 1 298 -169 246 128 0 0 chr17 69972460 69972499 -15465981 + (TTC)n Simple_repeat Simple_repeat 2 40 0 259 281 45 11 chr17 69972839 69972928 -15465552 + L2 LINE L2 2985 3076 -196 189 0 0 0 chr17 69973145 69973166 -15465314 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 1539 172 34 14 chr17 69974042 69974339 -15464141 - AluJo SINE Alu -9 303 1 682 237 128 8 chr17 69974343 69974600 -15463880 - L1ME3 LINE L1 0 6170 5876 983 281 24 4 chr17 69975327 69975580 -15462900 + MIR SINE MIR 4 261 -1 1310 194 4 0 chr17 69975580 69975812 -15462668 + AluJo SINE Alu 1 233 -79 269 231 0 0 chr17 69975812 69975864 -15462616 + LTR30 LTR ERV1 1 52 -670 1252 141 99 75 chr17 69975864 69976232 -15462248 + LTR12 LTR ERV1 55 2021 -417 264 237 52 21 chr17 69976232 69976329 -15462151 + LTR30 LTR ERV1 544 643 -79 606 180 0 0 chr17 69976331 69976431 -15462049 + LTR12 LTR ERV1 615 714 0 372 153 0 0 chr17 69976431 69976490 -15461990 + AluJo SINE Alu 230 288 -14 212 326 29 57 chr17 69976980 69977155 -15461325 + L3b LINE CR1 1212 1381 -202 186 171 0 0 chr17 69977436 69977477 -15461003 + T-rich Low_complexity Low_complexity 1 41 0 2199 106 13 0 chr17 69977517 69977818 -15460662 + AluSx SINE Alu 1 305 -7 2337 81 0 19 chr17 69978382 69978690 -15459790 + AluSg SINE Alu 1 302 -8 261 216 93 31 chr17 69978812 69978909 -15459571 - L1ME4a LINE L1 -54 6067 5965 218 200 0 22 chr17 69979198 69979243 -15459237 + GA-rich Low_complexity Low_complexity 3 46 0 520 339 49 4 chr17 69980087 69980332 -15458148 - MIR SINE MIR -3 259 4 624 240 10 74 chr17 69980788 69980998 -15457482 - MIR SINE MIR -33 229 35 386 288 150 26 chr17 69981163 69981396 -15457084 - L2 LINE L2 -541 2773 2512 357 207 20 51 chr17 69981780 69982083 -15456397 + GA-rich Low_complexity Low_complexity 1 293 0 381 304 9 0 chr17 69982144 69982256 -15456224 - MIR SINE MIR -66 142 30 460 286 40 79 chr17 69982847 69983074 -15455406 - MIR SINE MIR -11 251 34 294 343 56 0 chr17 69983889 69984032 -15454448 - MIR SINE MIR -110 152 2 1947 138 3 0 chr17 69984295 69984592 -15453888 + AluJb SINE Alu 1 298 -14 1222 99 0 0 chr17 69984735 69984897 -15453583 + AluSg/x SINE Alu 137 298 -14 245 319 0 0 chr17 69985042 69985111 -15453369 - MIR SINE MIR -72 190 122 186 103 0 0 chr17 69990661 69990690 -15447790 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 2246 96 7 0 chr17 69991060 69991365 -15447115 - AluSq SINE Alu 0 307 1 252 0 0 0 chr17 69993254 69993282 -15445198 + (T)n Simple_repeat Simple_repeat 1 28 0 327 282 82 0 chr17 69993354 69993464 -15445016 - L2 LINE L2 -1 3271 3153 879 245 0 0 chr17 69993777 69993965 -15444515 + AluJb SINE Alu 119 306 -6 818 222 24 14 chr17 69994859 69995071 -15443409 + MER20 DNA MER1_type 5 218 -1 375 41 0 0 chr17 69995302 69995351 -15443129 + (TC)n Simple_repeat Simple_repeat 2 50 0 207 0 0 0 chr17 69995350 69995373 -15443107 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 491 254 48 8 chr17 69995384 69995510 -15442970 + L2 LINE L2 3183 3313 0 363 226 0 0 chr17 69996177 69996279 -15442201 + (CA)n Simple_repeat Simple_repeat 1 102 0 437 223 51 76 chr17 69996288 69996445 -15442035 - MIR SINE MIR -11 251 99 385 302 56 0 chr17 69996660 69996786 -15441694 - MIR SINE MIR -70 192 60 2091 121 36 39 chr17 69997554 69997918 -15440562 - THE1B LTR MaLR -1 363 1 2280 113 0 0 chr17 69998022 69998315 -15440165 - AluSg SINE Alu -17 293 1 308 292 38 16 chr17 69998723 69998877 -15439603 - L1ME LINE L1 -345 5776 5616 2436 56 52 0 chr17 69998877 69999165 -15439315 - AluY SINE Alu -8 303 1 308 292 38 16 chr17 69999165 69999195 -15439285 - L1ME LINE L1 -505 5616 5588 1923 160 0 41 chr17 69999196 69999228 -15439252 - AluSx SINE Alu -6 306 274 195 42 0 0 chr17 69999228 69999252 -15439228 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1923 160 0 41 chr17 69999252 69999538 -15438942 - AluSx SINE Alu -38 274 1 189 146 21 62 chr17 69999643 69999691 -15438789 - L2 LINE L2 -1 3312 3267 1627 166 37 96 chr17 69999835 70000294 -15438186 + MSTB1 LTR MaLR 1 432 0 1102 207 73 4 chr17 70000296 70000571 -15437909 + MLT-int LTR MaLR 2 295 -1440 2536 200 61 48 chr17 70000680 70001089 -15437391 + MSTB2-int LTR MaLR 933 1348 -303 2486 75 7 0 chr17 70001089 70001384 -15437096 + AluY SINE Alu 1 297 -14 2536 200 61 48 chr17 70001384 70001692 -15436788 + MSTB2-int LTR MaLR 1348 1651 0 2219 155 91 2 chr17 70001692 70002112 -15436368 + MSTB2 LTR MaLR 1 457 0 829 241 40 50 chr17 70002564 70002842 -15435638 + L1ME LINE L1 5425 5699 -422 449 191 95 0 chr17 70003022 70003148 -15435332 - L1MD3 LINE L1 -10 7985 7848 1298 96 0 28 chr17 70003162 70003340 -15435140 - AluSg/x SINE Alu -17 293 121 290 167 0 0 chr17 70003369 70003423 -15435057 - L1MD3 LINE L1 -158 7837 7784 252 0 0 0 chr17 70003441 70003469 -15435011 + (TG)n Simple_repeat Simple_repeat 1 28 0 868 190 98 15 chr17 70003477 70003682 -15434798 - L1MD2 LINE L1 -243 6116 5895 400 284 115 22 chr17 70004105 70004288 -15434192 + MLT1L LTR MaLR 48 247 -368 235 304 98 9 chr17 70004789 70004901 -15433579 + MER94 DNA DNA 11 132 -2 915 196 95 6 chr17 70005017 70005196 -15433284 - MER20 DNA MER1_type 0 219 25 639 215 44 25 chr17 70006164 70006322 -15432158 + MER20 DNA MER1_type 1 161 -58 1962 153 7 7 chr17 70006385 70006673 -15431807 + AluJb SINE Alu 12 299 -13 497 326 22 40 chr17 70007316 70007540 -15430940 - MIR SINE MIR -27 235 16 329 0 24 0 chr17 70007929 70007970 -15430510 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 5861 17 1 0 chr17 70007970 70008662 -15429818 - L1PA3 LINE L1 -13 6142 5450 3246 170 65 34 chr17 70008830 70009217 -15429263 + L1MB5 LINE L1 5393 5767 -407 198 0 0 0 chr17 70009217 70009239 -15429241 + (CA)n Simple_repeat Simple_repeat 2 23 0 3246 170 65 34 chr17 70009239 70009602 -15428878 + L1MB5 LINE L1 5767 6166 -8 268 139 0 0 chr17 70009849 70009892 -15428588 + MLT1K LTR MaLR 546 588 0 425 152 48 19 chr17 70010054 70010159 -15428321 + L1MB3 LINE L1 6075 6182 -1 367 208 121 47 chr17 70010174 70010323 -15428157 - L1ME4a LINE L1 -2 6119 5960 482 265 35 39 chr17 70010519 70010535 -15427945 - L1ME4a LINE L1 -168 5953 5938 207 0 0 0 chr17 70010535 70010558 -15427922 + (CA)n Simple_repeat Simple_repeat 2 24 0 482 265 35 39 chr17 70010558 70010656 -15427824 - L1ME4a LINE L1 -183 5938 5841 2036 125 41 52 chr17 70010656 70011023 -15427457 - THE1B LTR MaLR -1 363 1 482 265 35 39 chr17 70011023 70011167 -15427313 - L1ME4a LINE L1 -280 5841 5695 494 257 44 0 chr17 70013183 70013319 -15425161 + MIR SINE MIR 93 234 -28 23 0 0 71 chr17 70013339 70013381 -15425099 + AT_rich Low_complexity Low_complexity 1 39 0 431 309 55 39 chr17 70013764 70013945 -15424535 - MLT1I LTR MaLR -87 322 139 282 346 106 9 chr17 70014490 70014726 -15423754 + L2 LINE L2 2770 3024 -248 524 266 14 14 chr17 70014823 70014962 -15423518 - MER45A DNA AcHobo 0 178 40 407 233 38 38 chr17 70014984 70015117 -15423363 - MIR SINE MIR -124 138 6 2476 77 0 13 chr17 70015189 70015499 -15422981 - AluY SINE Alu -5 306 1 193 167 95 0 chr17 70015979 70016021 -15422459 - L2 LINE L2 -2 3311 3266 195 178 22 22 chr17 70016683 70016728 -15421752 - L2 LINE L2 -2 3311 3267 792 222 130 34 chr17 70016855 70017094 -15421386 + MIR SINE MIR 1 262 0 303 28 0 0 chr17 70017102 70017138 -15421342 + (CAT)n Simple_repeat Simple_repeat 2 37 0 21 82 0 0 chr17 70017376 70017425 -15421055 + GC_rich Low_complexity Low_complexity 1 49 0 260 297 11 11 chr17 70019350 70019441 -15419039 + MIR SINE MIR 54 144 -118 248 270 27 54 chr17 70021103 70021177 -15417303 - L2 LINE L2 -2 3311 3240 885 175 0 99 chr17 70021181 70021314 -15417166 - MER20 DNA MER1_type -18 201 97 2329 113 0 0 chr17 70021314 70021616 -15416864 - AluSg SINE Alu -8 302 1 885 175 0 99 chr17 70021616 70021705 -15416775 - MER20 DNA MER1_type -122 97 1 276 300 53 56 chr17 70021705 70022045 -15416435 - L2 LINE L2 -64 3249 2911 203 351 0 13 chr17 70022203 70022280 -15416200 - MIR SINE MIR -89 173 98 412 288 0 9 chr17 70022335 70022446 -15416034 + MIR SINE MIR 21 130 -132 1779 131 9 25 chr17 70023339 70023690 -15414790 - MER4A LTR ERV1 0 664 261 657 101 0 10 chr17 70023690 70023789 -15414691 - MER4A LTR ERV1 -566 98 1 401 234 90 0 chr17 70024019 70024130 -15414350 + MIR3 SINE MIR 34 154 -54 193 333 48 9 chr17 70024607 70024712 -15413768 + MIR SINE MIR 50 158 -104 474 273 8 23 chr17 70024748 70024880 -15413600 - MIR3 SINE MIR -66 142 13 563 232 98 43 chr17 70025429 70025629 -15412851 - MIR SINE MIR -52 210 5 400 283 28 0 chr17 70026712 70026818 -15411662 + MIR SINE MIR 81 189 -73 494 193 88 9 chr17 70027098 70027212 -15411268 - MIR SINE MIR -93 169 47 3729 65 8 6 chr17 70027321 70027830 -15410650 + L1PA8 LINE L1 5662 6171 -1 236 280 53 0 chr17 70027874 70027949 -15410531 + L2 LINE L2 3017 3095 -177 3152 162 39 69 chr17 70028584 70029295 -15409185 - L1MB5 LINE L1 0 6174 5485 328 327 0 10 chr17 70029317 70029421 -15409059 - MIR SINE MIR -113 149 47 2446 100 17 6 chr17 70029651 70030011 -15408469 - THE1B LTR MaLR 0 364 1 267 173 0 0 chr17 70032927 70032979 -15405501 + (CA)n Simple_repeat Simple_repeat 1 52 0 591 318 119 75 chr17 70033202 70033910 -15404570 + L1ME LINE L1 98 836 -5283 408 293 70 51 chr17 70033914 70034170 -15404310 + L1ME LINE L1 3096 3356 -2773 2752 198 14 25 chr17 70034243 70034793 -15403687 + MLT2B3 LTR ERVL 3 546 -8 326 300 46 23 chr17 70034794 70034924 -15403556 + L1ME LINE L1 3459 3591 -2538 764 231 202 0 chr17 70034930 70035168 -15403312 - L1ME1 LINE L1 -4 6162 5877 584 152 53 6 chr17 70035200 70035371 -15403109 + CT-rich Low_complexity Low_complexity 2 180 0 655 168 0 0 chr17 70035376 70035483 -15402997 - FLAM_C SINE Alu -36 107 1 2044 209 47 2 chr17 70035483 70035927 -15402553 - L1ME1 LINE L1 -276 5890 5427 701 279 147 51 chr17 70035985 70036437 -15402043 + L1ME LINE L1 3780 4312 -1817 792 255 57 49 chr17 70036442 70036504 -15401976 + L1ME LINE L1 5118 5178 -969 2494 52 10 0 chr17 70036504 70036794 -15401686 + AluY SINE Alu 1 293 -18 792 255 57 49 chr17 70036794 70036805 -15401675 + L1ME LINE L1 5178 5187 -960 2221 87 0 4 chr17 70036805 70037081 -15401399 + AluSq SINE Alu 39 313 0 792 255 57 49 chr17 70037081 70037454 -15401026 + L1ME LINE L1 5187 5576 -571 183 259 99 49 chr17 70037496 70037577 -15400903 - MIR3 SINE MIR -41 167 83 2005 80 102 0 chr17 70037889 70038153 -15400327 - AluSx SINE Alu -21 291 1 463 298 93 26 chr17 70038339 70038663 -15399817 - L1ME LINE L1 -305 5816 5511 1620 128 16 96 chr17 70038673 70038902 -15399578 - L1MD1 LINE L1 0 6242 6051 2367 98 0 3 chr17 70038902 70039199 -15399281 - AluSx SINE Alu -16 296 1 1620 128 16 96 chr17 70039199 70039335 -15399145 - L1MD1 LINE L1 -191 6051 5906 1606 146 97 17 chr17 70039414 70039702 -15398778 - AluJb SINE Alu -1 311 1 1374 161 64 35 chr17 70039737 70040048 -15398432 - MER33 DNA MER1_type 0 324 5 599 247 11 79 chr17 70040134 70040324 -15398156 - MER5B DNA MER1_type -1 177 1 275 244 0 11 chr17 70042173 70042263 -15396217 + CT-rich Low_complexity Low_complexity 1 89 0 537 231 134 0 chr17 70042528 70042662 -15395818 + MIR SINE MIR 1 152 -110 1161 264 22 39 chr17 70042683 70043099 -15395381 + L1M4c LINE L1 1413 1821 -4563 1401 87 44 10 chr17 70043101 70043307 -15395173 - MER30 DNA MER1_type 0 230 18 216 97 0 0 chr17 70043372 70043403 -15395077 + (CA)n Simple_repeat Simple_repeat 1 31 0 332 241 0 69 chr17 70043454 70043570 -15394910 + L1M4c LINE L1 2041 2148 -4415 318 204 143 71 chr17 70043676 70043774 -15394706 - MIR SINE MIR -22 240 136 * 403 252 19 0 chr17 70043772 70043875 -15394605 + MIR SINE MIR 147 251 -11 433 210 210 30 chr17 70044838 70045005 -15393475 - L1ME4a LINE L1 -159 6757 6561 242 252 144 9 chr17 70045102 70045213 -15393267 - L1ME4a LINE L1 -515 6444 6319 423 0 0 0 chr17 70045249 70045296 -15393184 + (TG)n Simple_repeat Simple_repeat 2 48 0 530 249 51 4 chr17 70045334 70045571 -15392909 - L1ME4a LINE L1 -2969 3972 3725 2186 127 0 0 chr17 70045697 70046023 -15392457 - AluSx SINE Alu 0 312 1 522 332 40 4 chr17 70046043 70046320 -15392160 - L1ME4a LINE L1 -4584 2538 2252 247 205 28 3 chr17 70046327 70046398 -15392082 - L1MCc LINE L1 -5080 1343 1283 253 293 103 35 chr17 70046864 70046980 -15391500 - L1MCc LINE L1 -5946 985 862 380 338 81 14 chr17 70046983 70047193 -15391287 - L1M4 LINE L1 -1327 4819 4596 735 165 17 0 chr17 70047297 70047412 -15391068 - FLAM_C SINE Alu -21 122 6 2466 64 0 39 chr17 70047986 70048297 -15390183 - AluY SINE Alu -12 299 1 330 290 31 67 chr17 70048298 70048522 -15389958 + L1ME4a LINE L1 5574 5789 -332 791 186 71 0 chr17 70048643 70048783 -15389697 - FRAM SINE Alu -22 154 5 209 0 0 88 chr17 70048792 70048826 -15389654 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 6373 102 0 5 chr17 70048826 70050300 -15388180 - L1PA10 LINE L1 -21 6147 4681 2245 136 0 0 chr17 70051430 70051740 -15386740 - AluSx SINE Alu -2 310 1 423 243 168 8 chr17 70051819 70051951 -15386529 - MIR SINE MIR -62 146 35 1261 226 48 102 chr17 70052120 70052158 -15386322 - MLT1H1 LTR MaLR -16 539 501 2417 73 6 16 chr17 70052158 70052474 -15386006 + AluSq SINE Alu 1 313 0 1261 226 48 102 chr17 70052474 70052736 -15385744 - MLT1H1 LTR MaLR -54 501 226 898 195 147 0 chr17 70052736 70052926 -15385554 + MER20 DNA MER1_type 2 219 0 1261 226 48 102 chr17 70052926 70053054 -15385426 - MLT1H1 LTR MaLR -329 226 144 2137 132 0 7 chr17 70053054 70053349 -15385131 + AluSx SINE Alu 2 294 -18 1261 226 48 102 chr17 70053349 70053476 -15385004 - MLT1H1 LTR MaLR -411 144 12 1573 88 0 5 chr17 70054040 70054244 -15384236 + AluY SINE Alu 107 309 -2 350 290 101 7 chr17 70054393 70054531 -15383949 - L1ME4a LINE L1 0 6121 5971 260 298 15 30 chr17 70054803 70054934 -15383546 + L1ME4a LINE L1 5938 6066 -55 488 316 71 18 chr17 70055361 70055586 -15382894 + MIR SINE MIR 23 259 -3 348 224 233 0 chr17 70056170 70056286 -15382194 + MER103 DNA DNA 3 145 -21 551 256 118 19 chr17 70056414 70056635 -15381845 + MIR SINE MIR 20 262 0 205 326 30 37 chr17 70056612 70056681 -15381799 - MIR3 SINE MIR -31 177 108 * 2501 112 103 10 chr17 70056681 70057099 -15381381 - MSTB2 LTR MaLR 0 457 1 205 326 30 37 chr17 70057099 70057164 -15381316 - MIR3 SINE MIR -100 108 44 419 243 155 0 chr17 70058371 70058528 -15379952 - MER5A DNA MER1_type 0 189 5 688 279 0 6 chr17 70058534 70058713 -15379767 + MER5B DNA MER1_type 1 178 0 316 267 50 0 chr17 70058715 70058816 -15379664 + L2 LINE L2 3149 3254 -18 191 318 52 78 chr17 70059176 70059330 -15379150 + L2 LINE L2 3076 3225 -47 342 0 0 0 chr17 70059336 70059374 -15379106 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 340 290 57 8 chr17 70060194 70060318 -15378162 - MIR SINE MIR -31 231 102 1510 251 60 81 chr17 70061727 70062433 -15376047 - MER21B LTR ERV1 -149 714 24 2151 138 10 0 chr17 70063089 70063394 -15375086 - AluSx SINE Alu -4 308 1 217 313 102 20 chr17 70063477 70063624 -15374856 - MIR3 SINE MIR -13 195 37 1064 298 100 16 chr17 70064323 70064884 -15373596 - L2 LINE L2 -558 2756 2149 233 218 13 0 chr17 70065054 70065132 -15373348 + (TGGA)n Simple_repeat Simple_repeat 1 79 0 661 180 12 0 chr17 70065289 70065461 -15373019 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 2369 97 7 0 chr17 70066208 70066518 -15371962 + AluSq SINE Alu 2 313 0 211 286 43 0 chr17 70066518 70066588 -15371892 + MER5A DNA MER1_type 64 136 -53 183 238 95 0 chr17 70068429 70068471 -15370009 - L2 LINE L2 -25 3288 3243 1635 185 13 61 chr17 70069098 70069492 -15368988 - MLT1B LTR MaLR -15 375 1 206 313 31 0 chr17 70069559 70069623 -15368857 + MIR SINE MIR 53 118 -90 375 86 0 0 chr17 70070538 70070596 -15367884 - AluSx SINE Alu 0 302 245 2661 56 0 0 chr17 70070618 70070922 -15367558 + AluY SINE Alu 1 304 -7 3068 70 81 0 chr17 70070922 70071366 -15367114 - LTR19A LTR ERV1 -5 481 2 1905 118 0 0 chr17 70071366 70071612 -15366868 - AluSx SINE Alu -62 250 5 1599 196 22 48 chr17 70071849 70072262 -15366218 - MLT2D LTR ERVL -8 406 5 188 184 79 0 chr17 70072860 70072898 -15365582 + MIR SINE MIR 81 121 -87 189 295 132 39 chr17 70073018 70073147 -15365333 + MIR3 SINE MIR 39 179 -29 764 225 60 23 chr17 70073416 70073634 -15364846 - MLT1L LTR MaLR -230 385 160 515 294 123 24 chr17 70073634 70074023 -15364457 - MLT1G3 LTR MaLR 0 595 90 489 258 0 23 chr17 70074032 70074160 -15364320 - MLT1G3 LTR MaLR -466 129 5 285 299 39 0 chr17 70074200 70074277 -15364203 - MER5A DNA MER1_type -75 114 35 402 188 0 35 chr17 70074293 70074378 -15364102 + MER5B DNA MER1_type 97 178 0 282 333 11 11 chr17 70075408 70075495 -15362985 - MIR3 SINE MIR -45 163 77 907 222 74 5 chr17 70077580 70077783 -15360697 - MER20 DNA MER1_type 0 219 3 322 205 128 0 chr17 70077848 70077926 -15360554 + 5S rRNA rRNA 3 90 -31 235 246 0 0 chr17 70077928 70077985 -15360495 - L1MC5 LINE L1 -79 7882 7826 497 256 54 6 chr17 70077991 70078159 -15360321 - L1MC5 LINE L1 -177 7784 7609 183 42 0 0 chr17 70078160 70078184 -15360296 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2336 72 0 0 chr17 70078184 70078461 -15360019 - AluSg1 SINE Alu -32 277 1 630 324 34 18 chr17 70078607 70078780 -15359700 - L1MC5 LINE L1 -535 7426 7244 2452 77 3 0 chr17 70078780 70079080 -15359400 - AluSx SINE Alu -11 301 1 630 324 34 18 chr17 70079080 70079233 -15359247 - L1MC5 LINE L1 -717 7244 7095 361 228 207 21 chr17 70080060 70080205 -15358275 - MIR SINE MIR -6 256 85 591 284 98 19 chr17 70081026 70081385 -15357095 + LTR16A LTR ERVL 64 450 0 307 185 46 62 chr17 70081697 70081762 -15356718 - MIR SINE MIR -145 117 54 509 342 183 12 chr17 70082068 70082550 -15355930 - L3 LINE CR1 -219 1358 795 432 232 40 0 chr17 70083043 70083142 -15355338 - MER119 DNA MER1_type -4 579 477 1347 203 40 41 chr17 70083142 70083441 -15355039 + MER47A DNA MER2_type 1 256 -2067 940 93 0 0 chr17 70083441 70083559 -15354921 + FLAM_C SINE Alu 2 119 -14 1347 203 40 41 chr17 70083559 70083670 -15354810 + MER47A DNA MER2_type 256 366 0 398 271 0 56 chr17 70084048 70084084 -15354396 - MER119 DNA MER1_type -482 101 65 2286 82 0 7 chr17 70084084 70084405 -15354075 + AluSg SINE Alu 1 319 0 398 271 0 56 chr17 70084405 70084474 -15354006 - MER119 DNA MER1_type -518 65 1 419 221 32 0 chr17 70084483 70084578 -15353902 - L1MC4 LINE L1 -163 7879 7782 445 330 70 0 chr17 70085296 70085511 -15352969 + MIR SINE MIR 31 260 -2 2481 98 19 26 chr17 70085673 70086051 -15352429 - THE1C LTR MaLR 0 375 1 1086 258 100 15 chr17 70086575 70086916 -15351564 + MLT1A2 LTR MaLR 1 370 -4 360 0 0 0 chr17 70087063 70087103 -15351377 + (CA)n Simple_repeat Simple_repeat 2 41 0 304 295 207 16 chr17 70087948 70088140 -15350340 - L2 LINE L2 -208 3064 2836 2257 108 0 0 chr17 70088257 70088544 -15349936 + AluSx SINE Alu 2 288 -24 279 125 0 0 chr17 70088544 70088568 -15349912 + AluY SINE Alu 2 312 0 183 379 33 26 chr17 70088642 70088795 -15349685 - MIR SINE MIR -86 176 23 236 209 0 0 chr17 70088861 70088904 -15349576 - L2 LINE L2 -17 3296 3254 207 178 89 0 chr17 70089035 70089080 -15349400 - L2 LINE L2 -259 3054 3006 21 0 0 0 chr17 70089390 70089411 -15349069 + AT_rich Low_complexity Low_complexity 1 21 0 676 271 119 33 chr17 70089449 70089844 -15348636 + MER113 DNA MER1_type? 44 472 -49 266 268 72 21 chr17 70089980 70090077 -15348403 - MIR SINE MIR -88 120 19 1627 110 132 44 chr17 70090126 70090398 -15348082 - AluSx SINE Alu -16 296 1 2132 146 13 3 chr17 70090399 70090707 -15347773 - AluSx SINE Alu -1 311 1 1997 86 105 0 chr17 70092659 70092926 -15345554 - AluSx SINE Alu -15 297 3 187 197 53 105 chr17 70093037 70093113 -15345367 - L2 LINE L2 -2 3311 3240 1633 278 144 68 chr17 70093485 70094007 -15344473 + L2 LINE L2 1222 1703 -1611 1860 56 0 0 chr17 70094007 70094223 -15344257 - AluY SINE Alu -95 216 1 1633 278 144 68 chr17 70094223 70094348 -15344132 + L2 LINE L2 1703 1817 -1497 1970 167 3 3 chr17 70094348 70094660 -15343820 - AluJb SINE Alu 0 312 1 1633 278 144 68 chr17 70094660 70095204 -15343276 + L2 LINE L2 1817 2318 -996 1990 188 4 40 chr17 70095204 70095601 -15342879 + L1MB3 LINE L1 5748 6130 -53 1865 119 56 4 chr17 70095601 70095896 -15342584 + AluSx SINE Alu 1 309 0 1990 188 4 40 chr17 70095896 70095949 -15342531 + L1MB3 LINE L1 6130 6183 0 1633 278 144 68 chr17 70095949 70095966 -15342514 + L2 LINE L2 2318 2332 -982 2226 100 0 0 chr17 70095966 70096275 -15342205 + AluSc SINE Alu 1 309 0 1633 278 144 68 chr17 70096275 70096380 -15342100 + L2 LINE L2 2332 2640 -674 697 302 63 37 chr17 70096569 70096644 -15341836 + L2 LINE L2 2888 2960 -353 1924 165 7 10 chr17 70096644 70096953 -15341527 - AluJb SINE Alu -2 310 3 697 302 63 37 chr17 70096953 70097287 -15341193 + L2 LINE L2 2960 3308 -5 391 289 50 19 chr17 70097352 70097511 -15340969 - MER5A DNA MER1_type -2 187 24 211 277 0 0 chr17 70097962 70098009 -15340471 + CT-rich Low_complexity Low_complexity 2 48 0 264 122 0 0 chr17 70098010 70098051 -15340429 + (CA)n Simple_repeat Simple_repeat 1 41 0 347 262 0 7 chr17 70098314 70098455 -15340025 + (CA)n Simple_repeat Simple_repeat 2 141 0 263 363 100 39 chr17 70098720 70099131 -15339349 - L2 LINE L2 -28 3244 2809 1334 226 93 35 chr17 70099302 70099731 -15338749 - MLT1J LTR MaLR -9 502 49 2169 81 0 4 chr17 70100288 70100559 -15337921 - AluY SINE Alu -5 306 37 383 199 74 130 chr17 70101542 70101758 -15336722 + MLT1K LTR MaLR 379 582 -6 2173 113 34 0 chr17 70101820 70102113 -15336367 - AluSx SINE Alu -9 303 1 363 44 0 0 chr17 70102628 70102673 -15335807 + (CA)n Simple_repeat Simple_repeat 1 45 0 196 240 20 0 chr17 70103109 70103159 -15335321 - L2 LINE L2 0 3313 3263 1176 227 71 80 chr17 70103290 70103752 -15334728 + MLT1H LTR MaLR 1 499 -50 4392 183 34 21 chr17 70103949 70103983 -15334497 - MER21B LTR ERV1 0 863 831 2161 120 30 35 chr17 70103983 70104349 -15334131 + THE1B LTR MaLR 1 364 0 4392 183 34 21 chr17 70104349 70105166 -15333314 - MER21B LTR ERV1 -32 831 1 3111 115 45 34 chr17 70105214 70105403 -15333077 - MER34B LTR ERV1 -29 536 351 6893 55 0 0 chr17 70105403 70106354 -15332126 - L1PA7 LINE L1 0 6154 5199 3111 115 45 34 chr17 70106354 70106694 -15331786 - MER34B LTR ERV1 -214 351 1 435 347 53 6 chr17 70106722 70107059 -15331421 - L1ME4a LINE L1 -205 5916 5564 1497 160 57 107 chr17 70107060 70107609 -15330871 - Charlie1b DNA MER1_type -2 521 7 252 183 17 0 chr17 70107669 70107729 -15330751 - L1MB8 LINE L1 0 6178 6118 290 182 61 0 chr17 70107729 70107795 -15330685 + MLT1H LTR MaLR 480 549 0 228 311 0 14 chr17 70108169 70108243 -15330237 - L2 LINE L2 0 3313 3241 522 269 150 0 chr17 70108600 70108767 -15329713 - MER117 DNA MER1_type 0 197 6 588 279 115 0 chr17 70108854 70109037 -15329443 + MIR SINE MIR 28 231 -31 620 311 115 13 chr17 70109543 70109855 -15328625 + L1MC4a LINE L1 5260 5603 -2205 563 264 100 11 chr17 70109873 70110153 -15328327 + L1MC4a LINE L1 5665 5969 -1839 1965 144 26 10 chr17 70110334 70110640 -15327840 + AluSx SINE Alu 1 311 -1 281 316 20 72 chr17 70111001 70111118 -15327362 + MLT1F LTR MaLR 11 119 -423 2699 149 8 35 chr17 70111118 70111517 -15326963 - MER66A LTR ERV1 0 478 93 1973 145 47 19 chr17 70111517 70111882 -15326598 + THE1C LTR MaLR 1 375 0 2699 149 8 35 chr17 70111882 70111973 -15326507 - MER66A LTR ERV1 -385 93 1 564 272 44 11 chr17 70112145 70112325 -15326155 + MLT1G1 LTR MaLR 407 592 -3 675 284 25 15 chr17 70112359 70112560 -15325920 - MIR SINE MIR -58 204 2 1586 146 86 8 chr17 70112880 70113147 -15325333 + AluJb SINE Alu 1 288 -24 1035 264 126 30 chr17 70113219 70113688 -15324792 - LTR67 LTR ERVL 0 557 44 431 279 39 16 chr17 70113709 70113838 -15324642 - MIR3 SINE MIR -30 178 47 314 282 137 0 chr17 70113904 70114021 -15324459 - L2 LINE L2 0 3272 3140 2517 55 0 0 chr17 70114079 70114368 -15324112 + AluY SINE Alu 1 289 -22 359 358 0 7 chr17 70114647 70114784 -15323696 - L2 LINE L2 -225 3047 2912 567 0 0 0 chr17 70114785 70114848 -15323632 + (TTTAA)n Simple_repeat Simple_repeat 3 65 0 1838 156 0 17 chr17 70114848 70115137 -15323343 - AluJb SINE Alu -27 285 2 307 348 111 11 chr17 70115695 70115876 -15322604 + MIR SINE MIR 21 219 -43 330 219 33 59 chr17 70115879 70116019 -15322461 - MIR SINE MIR -62 146 12 555 264 19 19 chr17 70116527 70116686 -15321794 - MIR SINE MIR -82 180 22 2936 7 0 0 chr17 70116793 70117101 -15321379 + AluYa5 SINE Alu 1 308 -3 2544 84 20 17 chr17 70117150 70117507 -15320973 - THE1B LTR MaLR -6 358 1 561 309 14 18 chr17 70117509 70117787 -15320693 + L1MC4a LINE L1 5732 6008 -1800 1477 210 10 19 chr17 70117878 70118187 -15320293 - AluJo SINE Alu -1 311 6 647 197 0 28 chr17 70118193 70118335 -15320145 - L1MD2 LINE L1 -15 6344 6207 3861 139 21 44 chr17 70118379 70118769 -15319711 - L1MB3 LINE L1 -10 6173 5807 2584 110 3 0 chr17 70118769 70119143 -15319337 + THE1C LTR MaLR 1 375 0 3861 139 21 44 chr17 70119143 70119509 -15318971 - L1MB3 LINE L1 -376 5807 5434 349 349 16 11 chr17 70119907 70120096 -15318384 + L2 LINE L2 2512 2701 -613 2240 110 34 8 chr17 70120453 70120808 -15317672 + THE1B LTR MaLR 1 364 0 290 298 11 21 chr17 70122070 70122164 -15316316 + MIR SINE MIR 23 115 -147 284 315 22 0 chr17 70122286 70122375 -15316105 + MIR3 SINE MIR 101 191 -17 375 286 17 8 chr17 70123433 70123552 -15314928 + MIR SINE MIR 79 198 -64 420 300 25 0 chr17 70123552 70123672 -15314808 - L2 LINE L2 -4 3309 3187 851 286 60 15 chr17 70123819 70124147 -15314333 + MLT1I LTR MaLR 64 407 -2 894 211 217 36 chr17 70124697 70125034 -15313446 - LTR33A LTR ERVL -5 518 121 486 285 139 78 chr17 70125375 70125486 -15312994 + MLT1L LTR MaLR 310 413 -202 2221 85 0 30 chr17 70125486 70125781 -15312699 + AluSq SINE Alu 21 306 -7 486 285 139 78 chr17 70125781 70125950 -15312530 + MLT1L LTR MaLR 413 607 -8 2079 138 3 3 chr17 70126242 70126554 -15311926 + AluSx SINE Alu 1 312 0 265 323 128 8 chr17 70126890 70127023 -15311457 + L2 LINE L2 3159 3307 -6 183 80 0 0 chr17 70127027 70127052 -15311428 + (TGAG)n Simple_repeat Simple_repeat 4 28 0 214 308 103 89 chr17 70128531 70128755 -15309725 + L2 LINE L2 2906 3132 -140 482 257 139 32 chr17 70129230 70129417 -15309063 + MIR SINE MIR 20 226 -36 196 313 0 16 chr17 70130544 70130608 -15307872 + L2 LINE L2 2712 2774 -540 1266 206 103 53 chr17 70130986 70131442 -15307038 - MLT1D LTR MaLR -26 479 1 464 274 162 30 chr17 70132670 70132936 -15305544 - L2 LINE L2 -5 3308 3008 472 296 143 43 chr17 70132995 70133511 -15304969 - L2 LINE L2 -380 2934 2367 246 282 8 97 chr17 70133585 70133654 -15304826 + L2 LINE L2 3136 3191 -81 990 175 0 0 chr17 70133654 70133820 -15304660 - FRAM SINE Alu 0 166 1 246 282 8 97 chr17 70133820 70133874 -15304606 + L2 LINE L2 3191 3248 -24 1387 230 101 39 chr17 70133882 70134317 -15304163 - MLT1C LTR MaLR 0 467 6 470 207 113 13 chr17 70136888 70137038 -15301442 + MER5B DNA MER1_type 14 178 0 450 309 13 7 chr17 70137047 70137199 -15301281 + MIR SINE MIR 20 172 -90 2372 101 0 0 chr17 70137556 70137853 -15300627 + AluSx SINE Alu 1 297 -15 286 75 0 0 chr17 70137866 70137906 -15300574 + (TTTTA)n Simple_repeat Simple_repeat 2 150 0 2447 50 0 0 chr17 70137906 70138184 -15300296 - AluY SINE Alu -1 321 5 1233 116 0 0 chr17 70138764 70138936 -15299544 - AluSq SINE Alu -7 306 135 2288 44 6 87 chr17 70138936 70139280 -15299200 - AluYb8 SINE Alu -2 316 1 515 342 99 5 chr17 70139566 70139788 -15298692 + MIR SINE MIR 18 260 -2 286 281 11 11 chr17 70139873 70139962 -15298518 - MIR SINE MIR -138 124 36 183 42 0 0 chr17 70141185 70141209 -15297271 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1920 112 0 51 chr17 70141209 70141504 -15296976 - AluSx SINE Alu -32 280 1 297 330 97 35 chr17 70141619 70141821 -15296659 + MIR SINE MIR 4 252 -10 195 42 0 0 chr17 70142045 70142069 -15296411 + (A)n Simple_repeat Simple_repeat 1 24 0 308 311 26 63 chr17 70143293 70143453 -15295027 + MIR SINE MIR 2 152 -58 2099 133 0 0 chr17 70143475 70143768 -15294712 + AluSx SINE Alu 1 293 -19 2247 86 7 0 chr17 70143910 70144202 -15294278 - AluSc SINE Alu -15 294 1 2225 101 10 0 chr17 70144234 70144531 -15293949 - AluSx SINE Alu -12 300 1 404 150 12 0 chr17 70145190 70145270 -15293210 + GA-rich Low_complexity Low_complexity 2 82 0 202 196 0 43 chr17 70145666 70145712 -15292768 - L2 LINE L2 -6 3266 3223 378 74 0 0 chr17 70146776 70146830 -15291650 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 277 274 0 44 chr17 70146879 70147014 -15291466 + G-rich Low_complexity Low_complexity 4 132 0 32 26 0 0 chr17 70147015 70147054 -15291426 + GC_rich Low_complexity Low_complexity 1 39 0 40 79 0 0 chr17 70147113 70147202 -15291278 + GC_rich Low_complexity Low_complexity 1 89 0 193 28 0 56 chr17 70147210 70147246 -15291234 + (CGGG)n Simple_repeat Simple_repeat 2 35 0 29 0 0 0 chr17 70147415 70147444 -15291036 + GC_rich Low_complexity Low_complexity 1 29 0 402 173 0 0 chr17 70147515 70147590 -15290890 + (CA)n Simple_repeat Simple_repeat 1 75 0 256 274 0 0 chr17 70147859 70147932 -15290548 + G-rich Low_complexity Low_complexity 1 73 0 29 0 0 0 chr17 70147981 70148010 -15290470 + GC_rich Low_complexity Low_complexity 1 29 0 274 270 0 0 chr17 70148047 70148110 -15290370 + G-rich Low_complexity Low_complexity 3 65 0 357 371 51 0 chr17 70150380 70150555 -15287925 - MIR SINE MIR -51 211 28 440 230 0 48 chr17 70150722 70150909 -15287571 + CT-rich Low_complexity Low_complexity 1 178 0 * 854 85 0 53 chr17 70150884 70151072 -15287408 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 308 233 0 11 chr17 70151082 70151172 -15287308 + C-rich Low_complexity Low_complexity 4 92 0 311 231 33 0 chr17 70151172 70151263 -15287217 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 192 286 65 13 chr17 70152439 70152516 -15285964 - MIR SINE MIR -65 197 117 705 241 0 6 chr17 70152665 70152827 -15285653 - MLT1A2 LTR MaLR -6 368 208 240 167 21 0 chr17 70152904 70152952 -15285528 - MER20 DNA MER1_type 0 219 171 657 216 62 41 chr17 70152961 70153155 -15285325 - MLT1A2 LTR MaLR -176 198 1 200 250 105 0 chr17 70153430 70153506 -15284974 + MIR3 SINE MIR 115 198 -10 409 333 199 16 chr17 70153769 70154404 -15284076 - L2 LINE L2 0 3313 2544 909 215 48 5 chr17 70154675 70154884 -15283596 - MER20 DNA MER1_type 0 219 2 2342 103 0 0 chr17 70154998 70155310 -15283170 + AluSx SINE Alu 1 312 0 1890 128 31 3 chr17 70155318 70155607 -15282873 + AluSx SINE Alu 1 297 -15 319 343 56 0 chr17 70156758 70156901 -15281579 + MIR SINE MIR 2 152 -110 1838 164 0 0 chr17 70207283 70207633 -15230847 - AluSx SINE Alu 0 350 1 2128 103 3 0 chr17 70207800 70208102 -15230378 - AluSp SINE Alu -10 303 1 1472 99 0 5 chr17 70208384 70208585 -15229895 + AluSq SINE Alu 100 299 -14 502 185 40 39 chr17 70208585 70208673 -15229807 + MLT1A1 LTR MaLR 201 361 -67 213 39 0 0 chr17 70208673 70208699 -15229781 + (TA)n Simple_repeat Simple_repeat 2 27 0 502 185 40 39 chr17 70208699 70208712 -15229768 + MLT1A1 LTR MaLR 361 372 -56 790 122 0 0 chr17 70208716 70208823 -15229657 - AluSq/x SINE Alu -205 107 1 473 147 0 0 chr17 70208824 70208899 -15229581 + MLT1A1 LTR MaLR 291 365 0 483 337 96 35 chr17 70208911 70209433 -15229047 - L2 LINE L2 -954 2360 1807 529 298 102 39 chr17 70210075 70210407 -15228073 + L1MEd LINE L1 791 1143 -4976 510 29 143 0 chr17 70210409 70210479 -15228001 + MADE1 DNA Mariner 1 80 0 2022 123 0 0 chr17 70210654 70210954 -15227526 - AluSx SINE Alu -12 300 1 314 76 39 2 chr17 70211222 70211281 -15227199 - Alu SINE Alu 0 302 248 395 131 0 0 chr17 70211699 70211760 -15226720 + FRAM SINE Alu 40 100 -66 1946 111 31 3 chr17 70212493 70212782 -15225698 + AluSx SINE Alu 6 302 -10 683 147 54 23 chr17 70212811 70212940 -15225540 + AluJo SINE Alu 5 137 -175 331 280 140 0 chr17 70212940 70213047 -15225433 - MIR3 SINE MIR -80 128 7 219 321 37 25 chr17 70213417 70213498 -15224982 + L2 LINE L2 3176 3257 -56 205 269 0 45 chr17 70213536 70213603 -15224877 - MIR SINE MIR -117 145 82 2168 112 0 0 chr17 70213745 70214050 -15224430 + AluSq SINE Alu 1 305 -8 818 153 0 8 chr17 70215228 70215359 -15223121 - FLAM_C SINE Alu -1 132 3 35 0 0 22 chr17 70215370 70215401 -15223079 + AT_rich Low_complexity Low_complexity 1 32 -13 1984 120 7 10 chr17 70215401 70215702 -15222778 - AluSx SINE Alu -12 300 1 35 0 0 22 chr17 70215702 70215716 -15222764 + AT_rich Low_complexity Low_complexity 32 45 0 1325 182 26 4 chr17 70215974 70216243 -15222237 - AluJb SINE Alu 0 312 38 1773 129 4 15 chr17 70216253 70216517 -15221963 - AluSx SINE Alu -15 297 37 308 275 29 87 chr17 70216524 70216662 -15221818 - L1ME LINE L1 -299 5822 5693 231 216 68 80 chr17 70216686 70216774 -15221706 + L2 LINE L2 2223 2309 -1005 2011 106 31 3 chr17 70216885 70217177 -15221303 - AluSp SINE Alu -13 300 1 531 90 0 0 chr17 70217349 70217427 -15221053 + (TCCA)n Simple_repeat Simple_repeat 1 78 0 334 310 113 7 chr17 70217498 70217640 -15220840 + MIR SINE MIR 11 167 -95 2064 91 3 39 chr17 70218313 70218622 -15219858 + AluSp SINE Alu 11 308 -5 2366 84 0 0 chr17 70219128 70219437 -15219043 - AluSc SINE Alu 0 309 1 712 147 54 16 chr17 70219437 70219566 -15218914 - AluSq/x SINE Alu -178 135 2 377 162 118 0 chr17 70219859 70219927 -15218553 - MER5A DNA MER1_type -80 109 34 2229 107 3 0 chr17 70220488 70220798 -15217682 + AluSq SINE Alu 1 311 -2 878 126 0 0 chr17 70220915 70221042 -15217438 + FLAM_C SINE Alu 1 127 -16 207 0 0 0 chr17 70221043 70221066 -15217414 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 773 214 30 68 chr17 70221115 70221278 -15217202 + L1MC4 LINE L1 7436 7587 -455 1555 166 16 46 chr17 70221278 70221585 -15216895 + AluJo SINE Alu 1 298 -14 773 214 30 68 chr17 70221585 70221687 -15216793 + L1MC4 LINE L1 7587 7691 -351 560 194 0 0 chr17 70221699 70221792 -15216688 - FLAM_A SINE Alu -21 121 29 267 54 0 0 chr17 70221807 70221844 -15216636 + (T)n Simple_repeat Simple_repeat 1 37 0 977 220 67 75 chr17 70221864 70222049 -15216431 + L1MC4 LINE L1 7674 7856 -186 2276 93 0 3 chr17 70222049 70222360 -15216120 + AluSq SINE Alu 1 310 -3 977 220 67 75 chr17 70222360 70222546 -15215934 + L1MC4 LINE L1 7856 8042 0 26 0 0 0 chr17 70223273 70223299 -15215181 + AT_rich Low_complexity Low_complexity 1 26 0 372 303 102 20 chr17 70224038 70224214 -15214266 + MIR SINE MIR 3 199 -52 1894 119 4 0 chr17 70224955 70225269 -15213211 - AluSx SINE Alu 0 327 13 1942 138 0 0 chr17 70225287 70225578 -15212902 - AluSx SINE Alu -21 291 1 2088 100 6 32 chr17 70226120 70226431 -15212049 - AluSx SINE Alu -9 303 1 473 282 34 34 chr17 70226466 70226615 -15211865 + MIR SINE MIR 6 154 -108 1704 160 0 18 chr17 70227039 70227320 -15211160 + AluJb SINE Alu 1 276 -36 1800 153 3 17 chr17 70228301 70228601 -15209879 - AluJb SINE Alu -5 307 12 347 331 43 6 chr17 70228764 70228927 -15209553 - HAL1 LINE L1 -966 1541 1373 639 231 149 0 chr17 70228963 70229158 -15209322 + MIR SINE MIR 39 262 0 314 219 0 16 chr17 70229180 70229262 -15209218 - L1MEc LINE L1 -4893 1261 1158 462 139 0 0 chr17 70229276 70229362 -15209118 + (C)n Simple_repeat Simple_repeat 1 86 0 191 200 0 59 chr17 70229429 70229514 -15208966 + C-rich Low_complexity Low_complexity 1 80 0 29 28 0 0 chr17 70229576 70229612 -15208868 + GC_rich Low_complexity Low_complexity 1 36 0 249 351 0 0 chr17 70229632 70229763 -15208717 + C-rich Low_complexity Low_complexity 1 131 0 1489 99 0 5 chr17 70229972 70230173 -15208307 - AluSg/x SINE Alu -21 291 92 1425 121 81 0 chr17 70231366 70231589 -15206891 + AluSq SINE Alu 1 241 -72 1845 117 4 4 chr17 70231704 70231978 -15206502 + AluSx SINE Alu 27 300 -12 940 189 80 9 chr17 70233412 70233624 -15204856 + MIR SINE MIR 12 238 -24 1857 101 62 4 chr17 70233769 70234045 -15204435 - AluSx SINE Alu -20 292 1 3170 169 47 0 chr17 70234461 70235019 -15203461 + L1MB7 LINE L1 5543 6126 -58 1286 144 72 13 chr17 70235745 70235776 -15202704 + L1M3 LINE L1 5444 5472 -708 186 71 0 0 chr17 70235776 70235804 -15202676 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1286 144 72 13 chr17 70235804 70235815 -15202665 + L1M3 LINE L1 5472 5481 -699 1399 164 71 0 chr17 70235815 70236083 -15202397 + AluJo SINE Alu 1 287 -25 1286 144 72 13 chr17 70236083 70236305 -15202175 + L1M3 LINE L1 5481 5711 -469 2177 113 0 0 chr17 70236308 70236609 -15201871 - AluSx SINE Alu -9 303 3 215 302 151 0 chr17 70237703 70237789 -15200691 + L2 LINE L2 3173 3271 -1 2156 120 0 27 chr17 70239157 70239457 -15199023 + AluSx SINE Alu 1 292 -20 31 44 0 0 chr17 70239624 70239669 -15198811 + AT_rich Low_complexity Low_complexity 1 45 0 1382 140 29 48 chr17 70239746 70239796 -15198684 - L1MB3 LINE L1 -2 6181 6132 1835 154 0 43 chr17 70239796 70240121 -15198359 - AluJo SINE Alu -1 311 1 1382 140 29 48 chr17 70240121 70240342 -15198138 - L1MB3 LINE L1 -51 6132 5915 372 254 98 0 chr17 70240657 70240779 -15197701 - MIR SINE MIR -70 192 59 2364 73 16 7 chr17 70240958 70241261 -15197219 - AluSg SINE Alu -4 306 1 1673 118 45 76 chr17 70241261 70241322 -15197158 - Charlie5 DNA MER1_type -45 2579 2518 1823 174 0 7 chr17 70241322 70241626 -15196854 + AluJo SINE Alu 11 312 0 1673 118 45 76 chr17 70241626 70241921 -15196559 - Charlie5 DNA MER1_type -106 2518 2234 469 271 0 0 chr17 70241926 70242044 -15196436 - Charlie5 DNA MER1_type -2494 118 1 901 167 86 6 chr17 70242101 70242275 -15196205 - MER58A DNA MER1_type -4 220 33 2269 90 3 17 chr17 70243268 70243569 -15194911 + AluSx SINE Alu 1 297 -15 222 294 59 0 chr17 70244115 70244200 -15194280 + MIR SINE MIR 50 139 -123 2240 99 7 0 chr17 70244244 70244536 -15193944 + AluSg SINE Alu 1 294 -16 1688 157 33 18 chr17 70244544 70244818 -15193662 + AluJo SINE Alu 1 278 -34 31 0 0 0 chr17 70244822 70244853 -15193627 + AT_rich Low_complexity Low_complexity 1 31 0 2325 105 0 0 chr17 70244858 70245163 -15193317 - AluSx SINE Alu -7 305 1 182 191 43 0 chr17 70245197 70245244 -15193236 + MIR SINE MIR 200 248 -14 183 290 54 21 chr17 70245562 70245655 -15192825 - MER5A DNA MER1_type -74 115 20 839 143 33 24 chr17 70246268 70246416 -15192064 - L1MB5 LINE L1 0 6174 6029 1921 151 114 46 chr17 70246416 70246485 -15191995 - MLT1C LTR MaLR 0 467 404 2220 118 0 7 chr17 70246485 70246791 -15191689 + AluSx SINE Alu 1 304 -8 1921 151 114 46 chr17 70246791 70246907 -15191573 - MLT1C LTR MaLR -63 404 297 2074 131 3 3 chr17 70246907 70247212 -15191268 - AluY SINE Alu -6 305 1 1921 151 114 46 chr17 70247212 70247462 -15191018 - MLT1C LTR MaLR -170 297 1 839 143 33 24 chr17 70247462 70247523 -15190957 - L1MB5 LINE L1 -145 6029 5786 2039 154 0 0 chr17 70247782 70248080 -15190400 + AluJb SINE Alu 1 298 -14 296 213 13 13 chr17 70249046 70249121 -15189359 - MER5B DNA MER1_type -103 75 1 797 201 0 13 chr17 70249935 70250089 -15188391 + FRAM SINE Alu 2 153 -13 563 161 11 0 chr17 70250250 70250343 -15188137 + AluJb SINE Alu 202 295 -17 2260 135 0 0 chr17 70250707 70251019 -15187461 - AluSx SINE Alu 0 312 1 2043 160 0 3 chr17 70251180 70251492 -15186988 + AluJb SINE Alu 1 311 -1 423 299 56 48 chr17 70252514 70252765 -15185715 + L1ME LINE L1 69 321 -5798 383 141 47 0 chr17 70253090 70253154 -15185326 - AluSx SINE Alu 0 302 236 1519 96 0 15 chr17 70253154 70253351 -15185129 - AluSx SINE Alu -118 194 1 292 250 14 14 chr17 70253544 70253616 -15184864 + LTR67 LTR ERVL 101 172 -385 * 345 200 0 15 chr17 70253557 70253622 -15184858 + MLT1J LTR MaLR 110 173 -338 316 312 83 19 chr17 70253782 70253939 -15184541 + L1ME LINE L1 3635 3801 -2328 1049 271 91 73 chr17 70253981 70254516 -15183964 + L1ME LINE L1 4050 4574 -1571 2170 120 3 0 chr17 70254516 70254816 -15183664 + AluY SINE Alu 2 302 -9 1049 271 91 73 chr17 70254816 70255141 -15183339 + L1ME LINE L1 4574 4892 -1253 1902 156 0 0 chr17 70255141 70255452 -15183028 + AluJb SINE Alu 1 311 0 1049 271 91 73 chr17 70255452 70256153 -15182327 + L1ME LINE L1 4892 5643 -502 2317 58 0 0 chr17 70256364 70256662 -15181818 + AluY SINE Alu 3 300 0 2038 129 0 3 chr17 70256875 70257200 -15181280 - AluSx SINE Alu 0 324 1 715 321 96 85 chr17 70257448 70257730 -15180750 + L3 LINE CR1 477 754 -823 1947 159 7 0 chr17 70257730 70258038 -15180442 + AluSx SINE Alu 1 310 -2 715 321 96 85 chr17 70258038 70258260 -15180220 + L3 LINE CR1 754 972 -605 258 32 0 0 chr17 70258260 70258291 -15180189 + (CA)n Simple_repeat Simple_repeat 2 32 0 715 321 96 85 chr17 70258291 70258825 -15179655 + L3 LINE CR1 972 1528 -49 183 323 32 0 chr17 70259267 70259329 -15179151 - L2 LINE L2 -4 3268 3205 298 265 69 10 chr17 70259838 70259940 -15178540 - LTR67 LTR ERVL -2 555 448 1749 128 33 0 chr17 70260179 70260453 -15178027 - L1M4 LINE L1 -587 5591 5309 2218 102 0 0 chr17 70260666 70260949 -15177531 - AluSx SINE Alu -28 284 2 1943 150 0 0 chr17 70261829 70262116 -15176364 + AluJo SINE Alu 1 287 -25 1917 123 11 0 chr17 70262124 70262393 -15176087 + AluSx SINE Alu 29 300 -12 186 133 0 0 chr17 70262545 70262575 -15175905 + (CATATA)n Simple_repeat Simple_repeat 3 32 0 383 292 26 9 chr17 70262589 70262702 -15175778 - L2 LINE L2 -27 3286 3172 1758 108 116 7 chr17 70262727 70263004 -15175476 + AluSc SINE Alu 1 307 -2 204 40 0 0 chr17 70263081 70263106 -15175374 + (TA)n Simple_repeat Simple_repeat 1 25 0 2028 156 0 3 chr17 70264022 70264330 -15174150 + AluJo SINE Alu 1 307 -5 746 188 12 100 chr17 70264690 70264930 -15173550 - MER20 DNA MER1_type 0 219 1 707 156 9 0 chr17 70264933 70265042 -15173438 + MER81 DNA DNA 1 110 -4 2188 125 0 0 chr17 70265098 70265395 -15173085 + AluSx SINE Alu 1 297 -15 995 68 0 0 chr17 70265961 70266079 -15172401 + AluSq/x SINE Alu 1 118 -195 554 174 10 0 chr17 70266081 70266179 -15172301 + AluSc SINE Alu 196 294 -15 2401 54 0 0 chr17 70267569 70267847 -15170633 + AluY SINE Alu 1 278 -33 221 0 35 0 chr17 70267849 70267878 -15170602 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1430 227 77 51 chr17 70268092 70268545 -15169935 - MLT1C LTR MaLR -2 465 1 659 71 9 3 chr17 70269388 70269614 -15168866 + AluSx SINE Alu 1 301 -11 2359 105 0 3 chr17 70271043 70271348 -15167132 - AluSx SINE Alu -8 304 1 242 268 0 0 chr17 70271468 70271524 -15166956 + L2 LINE L2 3258 3313 0 189 253 96 36 chr17 70271946 70272029 -15166451 + MIR SINE MIR 103 190 -72 2232 91 0 60 chr17 70272335 70272654 -15165826 + AluSx SINE Alu 1 300 -12 626 180 56 43 chr17 70273110 70273271 -15165209 + MER53 DNA DNA 2 164 -25 189 295 16 0 chr17 70273738 70273799 -15164681 - L2 LINE L2 -213 3059 2998 1336 214 92 15 chr17 70273831 70274168 -15164312 - MLT1A2 LTR MaLR -11 363 1 2020 138 40 0 chr17 70276395 70276693 -15161787 + AluSx SINE Alu 1 310 -2 610 225 49 0 chr17 70276838 70276980 -15161500 + MER103 DNA DNA 16 164 -2 2266 119 0 0 chr17 70277964 70278259 -15160221 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr17 70278544 70278567 -15159913 + AT_rich Low_complexity Low_complexity 1 23 0 895 126 0 0 chr17 70278567 70278686 -15159794 - FLAM_C SINE Alu -24 119 1 321 113 0 81 chr17 70280610 70280672 -15157808 - MLT2C2 LTR ERVL 0 464 408 595 137 7 53 chr17 70280673 70280977 -15157503 + (TAGA)n Simple_repeat Simple_repeat 1 289 0 2026 226 27 21 chr17 70280977 70281451 -15157029 - MLT2B2 LTR ERVL -38 477 1 239 245 112 10 chr17 70282855 70282953 -15155527 - L1MC/D LINE L1 -2037 5771 5664 2244 108 0 0 chr17 70282993 70283289 -15155191 - AluSx SINE Alu -6 306 11 540 300 95 5 chr17 70283649 70283849 -15154631 + MIR SINE MIR 8 225 -37 2373 85 3 0 chr17 70283999 70284294 -15154186 + AluY SINE Alu 1 296 -15 3152 153 30 84 chr17 70284311 70284488 -15153992 + L1MB8 LINE L1 5496 5681 -497 2292 105 3 0 chr17 70284488 70284784 -15153696 + AluSg SINE Alu 1 297 -13 3152 153 30 84 chr17 70284784 70285300 -15153180 + L1MB8 LINE L1 5681 6152 -26 899 137 0 27 chr17 70285307 70285453 -15153027 - FRAM SINE Alu -1 175 34 195 265 44 0 chr17 70285521 70285589 -15152891 + MER5A DNA MER1_type 87 157 -32 478 314 67 9 chr17 70287357 70287580 -15150900 - MIR SINE MIR -7 255 20 1272 227 93 116 chr17 70287877 70287943 -15150537 - MLT1E3 LTR MaLR 0 624 558 1793 181 13 3 chr17 70287943 70288252 -15150228 + AluJo SINE Alu 1 312 0 1272 227 93 116 chr17 70288252 70288789 -15149691 - MLT1E3 LTR MaLR -66 558 4 1073 233 112 10 chr17 70289610 70289915 -15148565 + MLT1C LTR MaLR 132 467 0 180 309 100 41 chr17 70289918 70290187 -15148293 - L2 LINE L2 -940 2374 2090 2227 102 10 3 chr17 70290348 70290651 -15147829 - AluSx SINE Alu -7 305 1 197 317 5 75 chr17 70290654 70290840 -15147640 - L2 LINE L2 -1521 1793 1621 464 283 114 14 chr17 70290869 70291088 -15147392 - MIR SINE MIR -16 246 6 513 164 103 9 chr17 70292444 70292560 -15145920 - MER5A DNA MER1_type -2 187 61 2360 119 0 0 chr17 70292560 70292965 -15145515 - AluSx SINE Alu 0 405 1 267 179 104 0 chr17 70292966 70293033 -15145447 - MER5A DNA MER1_type -114 75 2 553 244 24 37 chr17 70293066 70293230 -15145250 + MIR SINE MIR 69 230 -32 1732 162 3 32 chr17 70293790 70294099 -15144381 + AluJo SINE Alu 3 302 -10 1740 118 118 0 chr17 70294099 70294371 -15144109 + AluSx SINE Alu 1 304 -8 105 24 0 0 chr17 70294371 70294497 -15143983 + AT_rich Low_complexity Low_complexity 1 126 0 2290 120 0 0 chr17 70295488 70295797 -15142683 + AluSx SINE Alu 1 309 -3 180 0 0 0 chr17 70296403 70296423 -15142057 + (T)n Simple_repeat Simple_repeat 1 20 0 387 196 51 80 chr17 70296423 70296447 -15142033 - L1ME4a LINE L1 0 6121 6098 2213 105 3 3 chr17 70296447 70296741 -15141739 + AluSx SINE Alu 3 296 -16 387 196 51 80 chr17 70296741 70296854 -15141626 - L1ME4a LINE L1 -23 6098 5988 1947 143 17 0 chr17 70297137 70297430 -15141050 - AluJb SINE Alu -14 298 1 1528 198 28 7 chr17 70297556 70297844 -15140636 + AluJb SINE Alu 1 294 -18 2253 78 3 3 chr17 70298540 70298847 -15139633 + AluSq SINE Alu 2 308 0 542 171 36 0 chr17 70299779 70299890 -15138590 - MER5B DNA MER1_type 0 178 64 617 202 16 109 chr17 70300054 70300093 -15138387 - MER5B DNA MER1_type 0 178 137 2342 94 0 0 chr17 70300093 70300391 -15138089 + AluSx SINE Alu 1 298 -14 617 202 16 109 chr17 70300391 70300483 -15137997 - MER5B DNA MER1_type -41 137 68 2292 80 28 0 chr17 70300483 70300651 -15137829 - AluY SINE Alu -14 297 116 462 18 0 0 chr17 70300651 70300706 -15137774 + (TG)n Simple_repeat Simple_repeat 2 56 0 2292 80 28 0 chr17 70300706 70300826 -15137654 - AluY SINE Alu -195 116 1 617 202 16 109 chr17 70300826 70300886 -15137594 - MER5B DNA MER1_type -110 68 4 273 213 193 95 chr17 70301537 70301620 -15136860 - L2 LINE L2 -9 3304 3231 2284 109 0 3 chr17 70301620 70301923 -15136557 + AluSp SINE Alu 1 302 -11 273 213 193 95 chr17 70301923 70302135 -15136345 - L2 LINE L2 -82 3231 2980 1691 178 42 63 chr17 70302135 70302307 -15136173 + MLT1B LTR MaLR 16 190 -200 1841 164 0 7 chr17 70302307 70302600 -15135880 + AluSx SINE Alu 1 291 -21 1691 178 42 63 chr17 70302600 70302810 -15135670 + MLT1B LTR MaLR 190 390 0 381 330 64 28 chr17 70302814 70303032 -15135448 - L2 LINE L2 -373 2941 2716 672 173 222 82 chr17 70303046 70303094 -15135386 - L1MD3 LINE L1 0 7995 7955 1898 132 23 46 chr17 70303094 70303398 -15135082 + AluSq SINE Alu 1 297 -16 672 173 222 82 chr17 70303398 70303592 -15134888 - L1MD3 LINE L1 -40 7955 7719 817 294 61 47 chr17 70303592 70303993 -15134487 - L2 LINE L2 -612 2702 2293 1810 172 0 23 chr17 70303993 70304301 -15134179 + AluJb SINE Alu 1 301 -11 817 294 61 47 chr17 70304301 70304344 -15134136 - L2 LINE L2 -1021 2293 2252 2341 117 0 0 chr17 70304784 70305092 -15133388 - AluSx SINE Alu -4 308 1 1519 210 0 0 chr17 70305116 70305383 -15133097 + Tigger7 DNA MER2_type 1 267 -2220 484 220 0 20 chr17 70305388 70305488 -15132992 + Tigger7 DNA MER2_type 2390 2487 0 274 235 0 86 chr17 70306360 70306441 -15132039 + L1MC4 LINE L1 7169 7242 -800 2146 153 0 0 chr17 70306474 70306781 -15131699 + AluSx SINE Alu 2 308 -4 1455 206 73 61 chr17 70306788 70307264 -15131216 + L1MC4a LINE L1 5974 6455 -1353 3086 204 75 56 chr17 70307285 70307468 -15131012 + L1MC4 LINE L1 7158 7336 -706 2211 96 40 7 chr17 70307468 70307770 -15130710 + AluSq SINE Alu 1 312 -1 3086 204 75 56 chr17 70307770 70307907 -15130573 + L1MC4 LINE L1 7336 7469 -573 243 0 0 0 chr17 70307907 70307934 -15130546 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3086 204 75 56 chr17 70307934 70308475 -15130005 + L1MC4 LINE L1 7469 8037 -5 1821 160 0 10 chr17 70308506 70308799 -15129681 - AluJb SINE Alu -21 291 2 259 268 203 38 chr17 70309022 70309542 -15128938 + L1M4 LINE L1 4331 4965 -1181 1932 174 0 3 chr17 70309542 70309847 -15128633 + AluJb SINE Alu 1 304 -8 259 268 203 38 chr17 70309847 70309927 -15128553 + L1M4 LINE L1 4965 5030 -1116 2009 144 3 0 chr17 70310176 70310474 -15128006 - AluSx SINE Alu -1 311 13 231 297 50 0 chr17 70310968 70311069 -15127411 + MIR SINE MIR 107 212 -50 468 308 96 0 chr17 70311515 70311713 -15126767 + MIR SINE MIR 16 232 -30 464 221 49 16 chr17 70311748 70311870 -15126610 + MER104 DNA Tc2 30 155 -25 1246 111 0 0 chr17 70313291 70313463 -15125017 - AluSg/x SINE Alu -5 305 134 1788 182 7 0 chr17 70313682 70313979 -15124501 - AluJo SINE Alu -13 299 1 2073 149 0 13 chr17 70314058 70314367 -15124113 + AluSx SINE Alu 1 305 -7 2169 75 0 51 chr17 70314729 70315048 -15123432 + AluSc SINE Alu 2 305 0 687 169 90 34 chr17 70315216 70315394 -15123086 + MLT1A1 LTR MaLR 23 210 -155 298 152 0 22 chr17 70315396 70315442 -15123038 + Alu SINE Alu 3 47 -255 1840 124 49 4 chr17 70315442 70315732 -15122748 + AluSx SINE Alu 3 304 0 2097 110 13 7 chr17 70315972 70316281 -15122199 + AluSx SINE Alu 1 311 -1 343 228 0 22 chr17 70316960 70317052 -15121428 - L1MC4 LINE L1 -1339 6703 6614 * 348 261 23 0 chr17 70316972 70317060 -15121420 + L1MC4 LINE L1 6614 6703 -1339 246 154 0 46 chr17 70317060 70317113 -15121367 + (TA)n Simple_repeat Simple_repeat 2 53 -10 1868 134 22 0 chr17 70317113 70317389 -15121091 - AluSx SINE Alu -30 282 1 246 154 0 46 chr17 70317389 70317400 -15121080 + (TA)n Simple_repeat Simple_repeat 53 63 0 21 57 0 0 chr17 70317835 70317870 -15120610 + AT_rich Low_complexity Low_complexity 1 35 0 2404 87 0 7 chr17 70317949 70318258 -15120222 - AluSx SINE Alu -5 307 1 211 244 209 12 chr17 70318277 70318363 -15120117 - MIR SINE MIR -76 132 30 1155 258 40 86 chr17 70318439 70318666 -15119814 + L1MC4a LINE L1 5292 5528 -593 2400 101 0 0 chr17 70318666 70318962 -15119518 + AluSx SINE Alu 1 296 -16 1155 258 40 86 chr17 70318962 70319479 -15119001 + L1MC4a LINE L1 5528 6012 -109 1453 98 0 0 chr17 70319689 70319872 -15118608 + AluSg/x SINE Alu 114 296 -16 443 19 0 0 chr17 70319874 70319928 -15118552 + AluY SINE Alu 2 55 -258 387 0 0 0 chr17 70320872 70320915 -15117565 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 195 42 0 0 chr17 70320914 70320938 -15117542 + (TTTAA)n Simple_repeat Simple_repeat 2 25 0 * 2065 100 18 18 chr17 70320938 70321218 -15117262 - AluSg SINE Alu -30 280 1 2426 89 0 0 chr17 70321220 70321523 -15116957 - AluSx SINE Alu -9 303 1 1298 161 65 0 chr17 70321531 70321779 -15116701 - L1MB3 LINE L1 -1 6182 5919 3925 91 35 2 chr17 70321790 70322326 -15116154 + MER41A LTR ERV1 1 554 0 2186 134 3 0 chr17 70322766 70323072 -15115408 - AluSx SINE Alu -5 307 1 411 233 154 25 chr17 70323539 70323779 -15114701 - L1ME4a LINE L1 -103 6018 5748 23 33 0 0 chr17 70323856 70323886 -15114594 + AT_rich Low_complexity Low_complexity 1 30 0 1049 65 0 0 chr17 70324700 70324823 -15113657 + AluYb8 SINE Alu 1 123 -195 3929 209 54 20 chr17 70324824 70325848 -15112632 + L1M4 LINE L1 2210 3267 -2879 1424 169 124 152 chr17 70326293 70326956 -15111524 + LTR48B LTR ERV1 1 644 0 248 331 173 0 chr17 70327044 70327171 -15111309 + MIR3 SINE MIR 36 184 -24 2210 74 3 14 chr17 70327380 70327663 -15110817 + AluSx SINE Alu 3 282 -30 693 36 0 0 chr17 70327666 70327750 -15110730 + (CAATA)n Simple_repeat Simple_repeat 2 85 0 335 269 8 75 chr17 70328428 70328562 -15109918 - MIR SINE MIR -26 236 112 2323 101 0 3 chr17 70328631 70328929 -15109551 - AluSq SINE Alu -16 297 1 1839 111 0 97 chr17 70329489 70329830 -15108650 + AluJo SINE Alu 1 308 -4 2027 158 63 5 chr17 70329830 70330209 -15108271 - L1MB7 LINE L1 -20 6164 5764 1809 159 105 0 chr17 70330557 70330872 -15107608 - MER7A DNA MER2_type 0 346 1 1970 133 0 13 chr17 70330962 70331262 -15107218 + AluJb SINE Alu 1 296 -16 2700 158 0 51 chr17 70331262 70331306 -15107174 + L1M3 LINE L1 5323 5368 -966 2199 125 3 6 chr17 70331306 70331619 -15106861 + AluSx SINE Alu 1 312 0 2700 158 0 51 chr17 70331619 70332081 -15106399 + L1M3 LINE L1 5368 5803 -531 603 108 0 0 chr17 70332082 70332165 -15106315 - AluS SINE Alu -228 84 2 317 241 78 26 chr17 70332188 70332304 -15106176 + L1ME3A LINE L1 5265 5386 -856 2052 142 0 29 chr17 70332308 70332624 -15105856 + AluSx SINE Alu 1 307 -5 1998 148 13 0 chr17 70332650 70332948 -15105532 + AluJo SINE Alu 1 302 -10 832 90 139 0 chr17 70333133 70333255 -15105225 + AluSg/x SINE Alu 156 294 -16 990 161 6 0 chr17 70333336 70333498 -15104982 - FAM SINE Alu -11 164 2 228 236 18 0 chr17 70334669 70334724 -15103756 - MLT1I LTR MaLR 0 409 354 2548 101 0 19 chr17 70334731 70335106 -15103374 + L1PA13 LINE L1 5793 6160 -3 2638 45 0 6 chr17 70335121 70335434 -15103046 + AluY SINE Alu 1 311 0 1875 147 7 23 chr17 70335486 70335786 -15102694 - AluJb SINE Alu -17 295 1 2116 114 0 0 chr17 70335977 70336335 -15102145 + AluSg1 SINE Alu 1 358 0 388 219 109 25 chr17 70336425 70336544 -15101936 + L2 LINE L2 3185 3313 0 1392 240 81 39 chr17 70337421 70337899 -15100581 + L1ME3A LINE L1 5570 6071 -99 1068 218 208 30 chr17 70337899 70338326 -15100154 - MLT1D LTR MaLR -2 503 1 1392 240 81 39 chr17 70338326 70338339 -15100141 + L1ME3A LINE L1 6071 6082 -88 24 32 0 0 chr17 70338473 70338504 -15099976 + AT_rich Low_complexity Low_complexity 1 31 0 1284 186 35 4 chr17 70338637 70338895 -15099585 - AluJo SINE Alu -1 311 46 180 0 0 0 chr17 70339523 70339543 -15098937 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 200 260 14 96 chr17 70340013 70340086 -15098394 - MIR3 SINE MIR -3 205 139 351 0 0 0 chr17 70340335 70340374 -15098106 + (CA)n Simple_repeat Simple_repeat 2 40 0 1979 123 30 0 chr17 70340450 70340751 -15097729 + AluSx SINE Alu 1 310 -2 574 219 59 71 chr17 70340827 70340996 -15097484 + MER5B DNA MER1_type 12 178 0 2714 167 34 46 chr17 70341326 70341918 -15096562 + L1MB3 LINE L1 5599 6183 0 1941 123 31 0 chr17 70343008 70343300 -15095180 + AluSx SINE Alu 1 301 -11 625 304 34 25 chr17 70343505 70343709 -15094771 + MIR SINE MIR 1 206 -56 2173 106 0 0 chr17 70343723 70344015 -15094465 - AluSx SINE Alu -20 292 1 2180 110 3 0 chr17 70344453 70344762 -15093718 + AluSp SINE Alu 1 310 -3 282 146 21 0 chr17 70344763 70344811 -15093669 - MLT1L LTR MaLR -557 58 10 395 313 119 6 chr17 70345698 70345874 -15092606 + MIR3 SINE MIR 5 200 -8 28 29 0 0 chr17 70346400 70346435 -15092045 + AT_rich Low_complexity Low_complexity 1 35 0 186 71 0 0 chr17 70346987 70347015 -15091465 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 812 141 25 0 chr17 70347037 70347158 -15091322 + FLAM_C SINE Alu 2 125 -8 441 314 58 37 chr17 70347180 70347422 -15091058 + MLT1J LTR MaLR 3 249 -262 1926 109 0 4 chr17 70347472 70347747 -15090733 - AluSx SINE Alu -38 274 1 728 289 57 33 chr17 70347928 70348326 -15090154 - L1ME4a LINE L1 -76 6045 5640 25 0 0 0 chr17 70349755 70349780 -15088700 + AT_rich Low_complexity Low_complexity 1 25 0 1398 145 19 91 chr17 70350964 70351125 -15087355 + AluJo SINE Alu 1 129 -183 2121 120 7 0 chr17 70351125 70351426 -15087054 + AluSq SINE Alu 1 303 -10 1398 145 19 91 chr17 70351426 70351582 -15086898 + AluJo SINE Alu 129 295 -17 731 213 148 0 chr17 70351647 70351802 -15086678 - MER5A DNA MER1_type -5 184 7 904 115 0 22 chr17 70351883 70352022 -15086458 + AluJo SINE Alu 1 136 -176 345 271 10 10 chr17 70352024 70352120 -15086360 + MER5B DNA MER1_type 83 178 0 198 254 22 116 chr17 70352120 70352182 -15086298 + MIR3 SINE MIR 54 99 -109 2147 110 3 3 chr17 70352182 70352492 -15085988 + AluSx SINE Alu 1 310 -2 198 254 22 116 chr17 70352492 70352550 -15085930 + MIR3 SINE MIR 99 161 -47 1649 172 30 3 chr17 70353714 70354016 -15084464 + AluJo SINE Alu 1 310 -2 1085 164 19 23 chr17 70354057 70354271 -15084209 + MER20 DNA MER1_type 3 215 -4 1219 210 18 18 chr17 70354648 70354924 -15083556 + L1MD3 LINE L1 6997 7272 -723 821 201 18 57 chr17 70354924 70355065 -15083415 + AluJo SINE Alu 1 131 -181 1898 56 105 11 chr17 70355065 70355331 -15083149 + AluY SINE Alu 1 291 -20 821 201 18 57 chr17 70355331 70355418 -15083062 + AluJo SINE Alu 131 220 -92 263 174 0 0 chr17 70355418 70355464 -15083016 + FLAM_A SINE Alu 85 130 -3 2200 78 7 3 chr17 70355492 70355785 -15082695 + AluY SINE Alu 1 294 -17 538 158 168 0 chr17 70355801 70355902 -15082578 + MLT1F1 LTR MaLR 2 119 -448 606 86 155 78 chr17 70355906 70356001 -15082479 - MER30 DNA MER1_type -1 229 122 2292 89 0 0 chr17 70356001 70356303 -15082177 - AluY SINE Alu -9 302 1 606 86 155 78 chr17 70356303 70356323 -15082157 - MER30 DNA MER1_type -108 122 105 5688 27 0 8 chr17 70356345 70357009 -15081471 - SVA Other Other 0 1386 728 1251 192 27 72 chr17 70357009 70357343 -15081137 + L1ME1 LINE L1 5841 6159 -7 2024 141 0 0 chr17 70357344 70357635 -15080845 + AluSx SINE Alu 1 291 -21 215 125 25 0 chr17 70357636 70357676 -15080804 + (TA)n Simple_repeat Simple_repeat 2 42 0 184 280 144 56 chr17 70357761 70357886 -15080594 + L2 LINE L2 2038 2173 -1141 389 223 207 0 chr17 70358094 70358215 -15080265 - MER5A DNA MER1_type -35 154 9 1681 87 0 0 chr17 70358538 70358757 -15079723 + AluSq SINE Alu 1 219 -94 837 67 0 0 chr17 70358757 70358862 -15079618 + AluSg/x SINE Alu 188 292 -20 2344 77 0 6 chr17 70358864 70359175 -15079305 + AluY SINE Alu 1 309 -2 215 284 92 64 chr17 70359506 70359615 -15078865 + L2 LINE L2 3121 3232 -40 1958 97 47 27 chr17 70360213 70360512 -15077968 + AluSx SINE Alu 1 305 -7 409 239 130 36 chr17 70361097 70361235 -15077245 + LTR16A1 LTR ERVL 65 215 -242 1408 162 0 86 chr17 70361246 70361577 -15076903 + AluJo SINE Alu 7 311 0 2041 122 3 0 chr17 70362528 70362822 -15075658 + AluSx SINE Alu 1 295 -17 2128 111 3 0 chr17 70363357 70363655 -15074825 - AluSx SINE Alu -13 299 1 1497 174 44 24 chr17 70363656 70363949 -15074531 - AluJb SINE Alu -13 299 1 2304 80 3 0 chr17 70364562 70364863 -15073617 + AluSp SINE Alu 2 303 -10 2165 126 0 0 chr17 70365030 70365339 -15073141 + AluSx SINE Alu 1 309 -3 197 86 57 0 chr17 70365345 70365380 -15073100 + A-rich Low_complexity Low_complexity 4 40 0 385 325 66 13 chr17 70365567 70365718 -15072762 + MIR3 SINE MIR 16 174 -34 772 141 11 126 chr17 70365729 70365920 -15072560 - FRAM SINE Alu -7 169 1 404 250 100 0 chr17 70366393 70366513 -15071967 - LTR16B LTR ERVL -91 373 242 2195 97 13 7 chr17 70366523 70366833 -15071647 + AluSx SINE Alu 1 312 0 2148 92 31 0 chr17 70366847 70367140 -15071340 + AluSx SINE Alu 1 302 -10 295 202 21 85 chr17 70367895 70367989 -15070491 + L1MEd LINE L1 413 500 -6030 1098 278 103 77 chr17 70367994 70368144 -15070336 + L1MEd LINE L1 567 712 -5818 2306 80 3 3 chr17 70368144 70368457 -15070023 + AluSq SINE Alu 1 313 0 1098 278 103 77 chr17 70368457 70369276 -15069204 + L1MEd LINE L1 712 1561 -4969 1370 259 134 2 chr17 70369284 70369693 -15068787 - LTR16B LTR ERVL -1 463 1 275 294 72 6 chr17 70369694 70369874 -15068606 + L1MEd LINE L1 1568 1668 -4862 2194 81 0 10 chr17 70369880 70370188 -15068292 + AluY SINE Alu 7 311 0 1500 181 108 0 chr17 70370271 70370558 -15067922 + 7SLRNA srpRNA srpRNA 1 318 -2 203 184 11 81 chr17 70370840 70370927 -15067553 + A-rich Low_complexity Low_complexity 5 85 0 394 277 54 42 chr17 70371046 70371212 -15067268 + L1MEd LINE L1 2447 2614 -3926 354 284 0 47 chr17 70371225 70371373 -15067107 + L1MEd LINE L1 2607 2747 -3793 369 223 31 20 chr17 70371403 70371503 -15066977 + MIR SINE MIR 52 159 -49 313 243 52 59 chr17 70371547 70371683 -15066797 + L1ME4a LINE L1 5982 6116 -5 997 274 81 40 chr17 70371759 70371820 -15066660 + L1ME4a LINE L1 5555 5612 -509 1780 105 42 70 chr17 70371820 70372133 -15066347 + AluSx SINE Alu 1 304 -8 997 274 81 40 chr17 70372133 70372441 -15066039 + L1ME4a LINE L1 5612 5955 -166 1959 144 0 3 chr17 70372441 70372753 -15065727 + AluJo SINE Alu 1 311 -1 997 274 81 40 chr17 70372753 70372926 -15065554 + L1ME4a LINE L1 5955 6120 -1 606 154 100 0 chr17 70372980 70373090 -15065390 + MER58D DNA MER1_type 4 124 -262 698 254 36 12 chr17 70373121 70373286 -15065194 - MIR SINE MIR -74 188 20 2180 86 0 7 chr17 70373291 70373593 -15064887 - AluSx SINE Alu -12 300 1 1311 188 45 4 chr17 70373746 70374012 -15064468 + MER58D DNA MER1_type 110 386 0 2710 205 24 51 chr17 70374562 70374775 -15063705 + L1ME1 LINE L1 5412 5629 -537 1933 74 93 0 chr17 70374775 70375044 -15063436 + AluSc SINE Alu 1 294 -15 2710 205 24 51 chr17 70375044 70375250 -15063230 + L1ME1 LINE L1 5629 5839 -327 1752 135 26 23 chr17 70375250 70375554 -15062926 + AluJo SINE Alu 1 305 -7 2710 205 24 51 chr17 70375554 70375625 -15062855 + L1ME1 LINE L1 5839 5910 -256 2293 75 7 0 chr17 70375625 70375931 -15062549 + AluY SINE Alu 1 308 -3 2710 205 24 51 chr17 70375931 70376149 -15062331 + L1ME1 LINE L1 5910 6103 -63 2136 117 0 0 chr17 70376229 70376529 -15061951 + AluSq SINE Alu 1 300 -13 1757 152 31 31 chr17 70376531 70376838 -15061642 + L1MB4 LINE L1 5824 6133 -47 1727 151 17 7 chr17 70376838 70377130 -15061350 + AluJb SINE Alu 1 295 -17 1757 152 31 31 chr17 70377130 70377171 -15061309 + L1MB4 LINE L1 6132 6172 -8 819 133 0 8 chr17 70377576 70377696 -15060784 + FLAM_C SINE Alu 6 124 -19 1760 127 48 0 chr17 70378494 70378785 -15059695 + AluSx SINE Alu 1 304 0 2101 101 0 3 chr17 70379314 70379611 -15058869 + AluSx SINE Alu 1 296 -16 286 174 0 43 chr17 70379624 70379716 -15058764 + GA-rich Low_complexity Low_complexity 1 88 0 314 239 0 14 chr17 70379824 70379895 -15058585 - LTR32 LTR ERVL 0 471 402 995 125 12 12 chr17 70379898 70380066 -15058414 + AluJb SINE Alu 5 172 -140 2033 170 49 26 chr17 70380115 70380441 -15058039 - LTR32 LTR ERVL -60 411 73 2343 96 0 0 chr17 70380441 70380753 -15057727 - AluSx SINE Alu 0 312 1 2033 170 49 26 chr17 70380753 70380814 -15057666 - LTR32 LTR ERVL -398 73 15 2351 84 0 3 chr17 70381316 70381625 -15056855 + AluSc SINE Alu 1 308 -1 2086 206 89 44 chr17 70382128 70382652 -15055828 + LTR48B LTR ERV1 1 559 -85 2309 78 0 0 chr17 70382652 70382946 -15055534 - AluSx SINE Alu -18 294 1 2086 206 89 44 chr17 70382946 70383037 -15055443 + LTR48B LTR ERV1 559 644 0 411 221 74 42 chr17 70383349 70383539 -15054941 + L1MC5 LINE L1 7730 7925 -36 2232 86 3 3 chr17 70383626 70383927 -15054553 + AluSq SINE Alu 1 301 -12 629 167 33 67 chr17 70384588 70384689 -15053791 + MER96B DNA MER1_type? 1 95 -322 1798 142 3 42 chr17 70384689 70385000 -15053480 - AluSx SINE Alu -13 299 1 629 167 33 67 chr17 70385000 70385078 -15053402 + MER96B DNA MER1_type? 95 174 -243 306 0 0 0 chr17 70385312 70385346 -15053134 + (TA)n Simple_repeat Simple_repeat 2 35 0 354 291 75 65 chr17 70386621 70386709 -15051771 - MIR SINE MIR -14 248 162 1493 167 0 55 chr17 70386709 70387049 -15051431 + AluJb SINE Alu 6 329 0 354 291 75 65 chr17 70387049 70387158 -15051322 - MIR SINE MIR -100 162 48 798 157 18 12 chr17 70387284 70387450 -15051030 + MER96B DNA MER1_type? 235 401 -16 252 59 0 0 chr17 70387618 70387652 -15050828 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 532 154 47 34 chr17 70387794 70387943 -15050537 + L1MA7 LINE L1 6140 6290 -1 2214 97 3 0 chr17 70388932 70389232 -15049248 + AluSx SINE Alu 1 301 -11 2106 107 3 3 chr17 70389450 70389760 -15048720 - AluSx SINE Alu -2 310 1 180 111 0 0 chr17 70389769 70389796 -15048684 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 1450 185 114 62 chr17 70389964 70390326 -15048154 - MLT1C LTR MaLR 0 467 77 2035 137 0 3 chr17 70390326 70390625 -15047855 + AluJb SINE Alu 1 298 -14 1450 185 114 62 chr17 70390625 70390699 -15047781 - MLT1C LTR MaLR -390 77 8 255 306 194 27 chr17 70390817 70391230 -15047250 + L2 LINE L2 2632 3079 -234 1627 132 0 43 chr17 70391230 70391511 -15046969 + AluJo SINE Alu 1 269 -43 2069 111 0 0 chr17 70391686 70391965 -15046515 - AluSg SINE Alu -31 279 1 509 208 91 52 chr17 70391969 70392123 -15046357 + L2 LINE L2 3150 3309 -4 236 297 14 54 chr17 70392096 70392170 -15046310 - L2 LINE L2 -7 3306 3236 * 493 199 243 7 chr17 70392263 70392399 -15046081 - MIR SINE MIR -74 188 21 2282 88 0 0 chr17 70392403 70392708 -15045772 - AluSx SINE Alu -7 305 1 1796 120 57 20 chr17 70392708 70393009 -15045471 - AluSx SINE Alu 0 312 1 198 0 0 0 chr17 70393605 70393627 -15044853 + (TTA)n Simple_repeat Simple_repeat 3 24 0 667 197 16 0 chr17 70393634 70393756 -15044724 - FAM SINE Alu -26 159 36 231 97 0 0 chr17 70393756 70393787 -15044693 - Alu SINE Alu -99 203 173 1353 159 126 0 chr17 70393805 70394075 -15044405 - AluJo SINE Alu -8 304 1 722 222 176 49 chr17 70394398 70394704 -15043776 + L2 LINE L2 2966 3310 -3 195 42 0 0 chr17 70394803 70394827 -15043653 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1223 89 15 79 chr17 70394876 70394998 -15043482 - MER30B DNA MER1_type 0 190 83 2143 50 3 54 chr17 70394998 70395330 -15043150 - AluY SINE Alu 0 317 1 1223 89 15 79 chr17 70395330 70395409 -15043071 - MER30B DNA MER1_type -107 83 1 2197 103 3 0 chr17 70396180 70396480 -15042000 + AluSx SINE Alu 1 301 -11 1522 184 21 0 chr17 70396578 70396866 -15041614 - AluJo SINE Alu -18 294 1 608 160 7 120 chr17 70396868 70397018 -15041462 - AluJo/FLAM SINE Alu -169 133 1 1713 123 76 4 chr17 70397029 70397306 -15041174 - AluSx SINE Alu -9 303 7 2046 116 7 0 chr17 70397825 70398118 -15040362 - AluSx SINE Alu -17 295 1 183 80 0 0 chr17 70398309 70398334 -15040146 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2337 65 3 0 chr17 70398395 70398686 -15039794 + AluSx SINE Alu 1 292 -20 275 274 29 20 chr17 70398848 70398950 -15039530 - L1ME4a LINE L1 -17 6104 6002 1730 155 36 16 chr17 70398976 70399280 -15039200 - AluJb SINE Alu -2 310 1 925 194 0 6 chr17 70399378 70399548 -15038932 + FAM SINE Alu 1 169 -6 2160 99 0 7 chr17 70400025 70400327 -15038153 + AluY SINE Alu 1 300 -11 4933 65 7 0 chr17 70400790 70401410 -15037070 - L1PA8A LINE L1 -2 6129 5506 970 144 6 6 chr17 70401543 70401703 -15036777 + MER58B DNA MER1_type 173 332 -9 1783 158 3 28 chr17 70401704 70402021 -15036459 + AluJo SINE Alu 2 310 -2 270 256 0 0 chr17 70402029 70402107 -15036373 + GA-rich Low_complexity Low_complexity 1 78 0 396 0 0 0 chr17 70402269 70402313 -15036167 + (TG)n Simple_repeat Simple_repeat 1 44 0 725 189 151 58 chr17 70402327 70402698 -15035782 - LTR7 LTR ERV1 -63 387 1 850 116 0 0 chr17 70402698 70402819 -15035661 + AluSg/x SINE Alu 180 300 -10 683 147 54 23 chr17 70402848 70402977 -15035503 + AluJo SINE Alu 5 137 -175 331 280 140 0 chr17 70402977 70403084 -15035396 - MIR3 SINE MIR -80 128 7 1509 185 122 28 chr17 70453402 70453764 -14984716 + MSTD LTR MaLR 1 396 0 276 30 0 0 chr17 70454633 70454666 -14983814 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 323 250 198 0 chr17 70455674 70455770 -14982710 + L2 LINE L2 3158 3272 0 786 231 38 5 chr17 70457279 70457420 -14981060 + MER20 DNA MER1_type 1 153 -66 1715 155 0 44 chr17 70457420 70457736 -14980744 + AluJo SINE Alu 1 302 -10 786 231 38 5 chr17 70457736 70457806 -14980674 + MER20 DNA MER1_type 153 219 0 279 303 66 0 chr17 70457869 70457945 -14980535 - L2 LINE L2 -4 3268 3188 2239 94 3 3 chr17 70458991 70459299 -14979181 + AluSx SINE Alu 1 308 -4 1994 118 3 3 chr17 70459301 70459597 -14978883 + AluSx SINE Alu 1 296 -16 216 275 14 43 chr17 70459741 70459810 -14978670 - L2 LINE L2 -210 3062 2996 425 270 142 37 chr17 70459816 70460108 -14978372 - L1ME4a LINE L1 0 6121 5861 1467 160 67 11 chr17 70460108 70460418 -14978062 + AluJo SINE Alu 1 325 0 425 270 142 37 chr17 70460418 70460624 -14977856 - L1ME4a LINE L1 -260 5861 5570 1900 121 48 0 chr17 70461711 70462000 -14976480 + AluSx SINE Alu 1 303 -9 272 241 0 0 chr17 70462352 70462406 -14976074 + MIR SINE MIR 199 252 -10 2224 90 33 0 chr17 70463019 70463318 -14975162 - AluSx SINE Alu -3 309 1 366 297 76 28 chr17 70463435 70463580 -14974900 + MER5A DNA MER1_type 4 155 -34 2413 74 0 0 chr17 70463652 70463962 -14974518 + AluSp SINE Alu 1 310 -3 2027 124 7 3 chr17 70464436 70464742 -14973738 + AluSq SINE Alu 1 307 -6 1063 169 106 20 chr17 70465141 70465274 -14973206 - AluJb SINE Alu -35 277 157 213 65 0 0 chr17 70465274 70465305 -14973175 + (TG)n Simple_repeat Simple_repeat 2 32 0 1063 169 106 20 chr17 70465305 70465426 -14973054 - AluJb SINE Alu -155 157 1 407 252 130 17 chr17 70465429 70465544 -14972936 - MIR SINE MIR -112 150 23 1464 155 22 84 chr17 70465882 70466204 -14972276 - AluJb SINE Alu -10 302 1 293 190 69 0 chr17 70466321 70466379 -14972101 - MIR SINE MIR -154 108 47 1605 164 31 7 chr17 70467472 70467759 -14970721 + AluJo SINE Alu 1 294 -18 481 128 216 0 chr17 70468078 70468180 -14970300 - MER21B LTR ERV1 -111 752 629 800 150 0 0 chr17 70468196 70468316 -14970164 + AluSq/x SINE Alu 1 120 -192 920 250 31 44 chr17 70468342 70468834 -14969646 - MER21B LTR ERV1 -288 575 1 191 355 13 0 chr17 70468834 70468910 -14969570 + MIR SINE MIR 180 256 -6 2260 94 0 7 chr17 70469035 70469344 -14969136 - AluSx SINE Alu -5 307 1 1983 133 0 10 chr17 70469824 70470125 -14968355 + AluSx SINE Alu 1 298 -14 1230 172 24 44 chr17 70470126 70470423 -14968057 - L1MB8 LINE L1 -9 6169 5879 1693 141 122 82 chr17 70471428 70471593 -14966887 + MLT1C LTR MaLR 1 158 -216 1898 117 39 0 chr17 70471593 70471876 -14966604 + AluSx SINE Alu 1 294 -18 1693 141 122 82 chr17 70471876 70472138 -14966342 + MLT1C LTR MaLR 158 351 -23 328 298 41 16 chr17 70473148 70473227 -14965253 - MIR SINE MIR -22 240 156 2174 97 0 7 chr17 70473227 70473525 -14964955 - AluSg SINE Alu -14 296 1 328 298 41 16 chr17 70473525 70473566 -14964914 - MIR SINE MIR -106 156 117 1772 162 75 7 chr17 70473631 70473869 -14964611 - MLT1A1 LTR MaLR -1 364 99 2258 85 3 7 chr17 70473869 70474175 -14964305 + AluY SINE Alu 1 305 -6 1772 162 75 7 chr17 70474175 70474244 -14964236 - MLT1A1 LTR MaLR -266 99 36 1398 178 45 35 chr17 70474244 70474530 -14963950 + AluJo SINE Alu 1 289 -23 240 128 0 43 chr17 70474536 70474583 -14963897 - MLT1A1 LTR MaLR -315 50 6 237 266 76 25 chr17 70474611 70474690 -14963790 + MIR SINE MIR 87 169 -93 182 281 293 0 chr17 70474690 70474772 -14963708 + MER5B DNA MER1_type 1 106 -72 805 163 43 171 chr17 70474808 70475176 -14963304 - MLT1C LTR MaLR -69 321 1 311 0 26 0 chr17 70475748 70475787 -14962693 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 468 314 60 32 chr17 70476059 70476244 -14962236 + MIR3 SINE MIR 6 195 -13 2209 148 52 25 chr17 70476729 70477243 -14961237 + LTR27 LTR ERV1 2 501 0 581 246 148 85 chr17 70477788 70478270 -14960210 - MLT1H LTR MaLR -7 542 16 543 129 0 166 chr17 70478360 70478466 -14960014 - L1MA10 LINE L1 -32 6302 6231 1769 150 0 10 chr17 70478466 70478766 -14959714 - AluSx SINE Alu -6 306 10 543 129 0 166 chr17 70478766 70478822 -14959658 - L1MA10 LINE L1 -103 6231 6167 288 265 15 0 chr17 70479021 70479089 -14959391 - MIR SINE MIR 0 262 194 2046 128 0 13 chr17 70479095 70479438 -14959042 - AluSx SINE Alu 0 312 1 1805 100 76 45 chr17 70479450 70479740 -14958740 - AluSg SINE Alu -11 299 1 2110 86 7 0 chr17 70480309 70480611 -14957869 + AluSg SINE Alu 1 304 0 1677 216 104 61 chr17 70480698 70480764 -14957716 - L1MB7 LINE L1 0 6184 6122 1983 125 28 0 chr17 70480764 70481053 -14957427 + AluSx SINE Alu 1 297 -15 1677 216 104 61 chr17 70481053 70481360 -14957120 - L1MB7 LINE L1 -62 6122 5777 673 159 30 15 chr17 70481360 70481492 -14956988 - L1PA16 LINE L1 0 6166 6033 1677 216 104 61 chr17 70481492 70481677 -14956803 - L1MB7 LINE L1 -407 5777 5601 301 65 87 0 chr17 70481667 70481713 -14956767 - L1P LINE L1 -779 5395 5346 * 370 143 0 0 chr17 70481713 70481776 -14956704 - L1MB7 LINE L1 -356 5828 5766 2357 170 54 9 chr17 70481780 70481880 -14956600 - MER66B LTR ERV1 -9 477 383 2298 72 7 3 chr17 70481880 70482185 -14956295 + AluY SINE Alu 1 306 -5 2357 170 54 9 chr17 70482185 70482526 -14955954 - MER66B LTR ERV1 -103 383 16 393 169 0 0 chr17 70482526 70482540 -14955940 - L1MB7 LINE L1 -359 5825 5812 2021 102 0 7 chr17 70482540 70482857 -14955623 - AluSx SINE Alu 0 315 1 393 169 0 0 chr17 70482857 70482928 -14955552 - L1MB7 LINE L1 -371 5813 5755 * 1903 106 42 0 chr17 70482924 70483207 -14955273 - L1P4 LINE L1 -526 5640 5346 2312 94 0 3 chr17 70483214 70483522 -14954958 + AluSx SINE Alu 1 307 -5 1658 192 9 12 chr17 70483523 70483661 -14954819 - L1MB7 LINE L1 -356 5828 5691 1854 154 0 20 chr17 70483661 70483985 -14954495 - AluJb SINE Alu 0 312 1 1658 192 9 12 chr17 70483985 70484190 -14954290 - L1MB7 LINE L1 -493 5691 5486 193 264 75 0 chr17 70484293 70484346 -14954134 - L2 LINE L2 -3 3269 3213 2046 111 14 7 chr17 70484438 70484735 -14953745 - AluSx SINE Alu -13 299 1 216 0 0 0 chr17 70484743 70484767 -14953713 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 754 162 0 0 chr17 70484770 70484887 -14953593 - FLAM_C SINE Alu -25 118 2 1624 135 0 0 chr17 70485839 70486076 -14952404 + AluJb SINE Alu 1 237 -75 1915 142 0 26 chr17 70486283 70486594 -14951886 + AluSx SINE Alu 2 304 -8 1514 225 122 10 chr17 70486616 70487033 -14951447 - L1ME3 LINE L1 0 6162 5699 822 159 8 0 chr17 70487033 70487165 -14951315 + FLAM_C SINE Alu 1 133 0 2477 58 3 0 chr17 70487174 70487484 -14950996 + AluY SINE Alu 1 311 0 1011 213 0 23 chr17 70487484 70487699 -14950781 - L1MB7 LINE L1 -25 6159 5950 2215 84 0 29 chr17 70487699 70488008 -14950472 - AluSp SINE Alu -13 300 1 2221 124 3 6 chr17 70488382 70488696 -14949784 + AluSq SINE Alu 1 313 0 2371 97 0 10 chr17 70489058 70489367 -14949113 + AluSx SINE Alu 1 306 -6 2246 83 0 21 chr17 70489489 70489778 -14948702 - AluSc SINE Alu -26 283 1 2134 135 3 0 chr17 70490523 70490826 -14947654 - AluSx SINE Alu -8 304 1 2032 113 11 11 chr17 70490909 70491191 -14947289 + AluSx SINE Alu 1 282 -30 270 0 0 0 chr17 70491194 70491224 -14947256 + (TAA)n Simple_repeat Simple_repeat 2 31 0 198 71 0 0 chr17 70491984 70492012 -14946468 + (CA)n Simple_repeat Simple_repeat 1 28 0 2384 70 0 55 chr17 70492261 70492589 -14945891 + AluSg SINE Alu 1 310 0 21 0 0 0 chr17 70492603 70492624 -14945856 + AT_rich Low_complexity Low_complexity 1 21 0 1277 79 11 0 chr17 70492624 70492802 -14945678 - L1MA1 LINE L1 -6 6296 6117 1975 156 7 0 chr17 70492814 70493109 -14945371 + AluSx SINE Alu 1 297 -15 2366 94 0 0 chr17 70493324 70493621 -14944859 + AluSc SINE Alu 1 297 -12 2624 52 0 3 chr17 70494518 70494827 -14943653 + AluY SINE Alu 2 309 -2 2286 90 0 13 chr17 70496162 70496462 -14942018 - AluSg SINE Alu -14 296 1 1827 165 0 20 chr17 70496524 70496827 -14941653 + AluJo SINE Alu 2 298 -14 1169 145 16 0 chr17 70497511 70497697 -14940783 + MER5A DNA MER1_type 1 189 0 356 153 0 0 chr17 70497805 70497864 -14940616 + Alu SINE Alu 243 301 -1 395 197 204 36 chr17 70497952 70498089 -14940391 - MER91A DNA MER1_type -35 161 2 2531 68 0 0 chr17 70498915 70499210 -14939270 + AluSq SINE Alu 6 300 -13 280 300 75 12 chr17 70499838 70499923 -14938557 + L1M4 LINE L1 5211 5289 -857 1968 161 13 0 chr17 70499923 70500227 -14938253 + AluJo SINE Alu 1 308 -4 280 300 75 12 chr17 70500227 70500301 -14938179 + L1M4 LINE L1 5289 5380 -766 2373 94 3 10 chr17 70500508 70500816 -14937664 + AluSx SINE Alu 1 306 -6 2370 88 7 7 chr17 70501472 70501780 -14936700 + AluSq SINE Alu 1 308 -5 2438 99 0 0 chr17 70502288 70502600 -14935880 + AluSx SINE Alu 1 312 0 2249 114 0 3 chr17 70502706 70503005 -14935475 - AluSx SINE Alu -14 298 1 676 269 95 3 chr17 70503033 70503327 -14935153 - L1ME4a LINE L1 0 6121 5801 2300 109 0 0 chr17 70504411 70504723 -14933757 - AluSx SINE Alu 0 312 1 988 138 181 21 chr17 70504750 70504938 -14933542 - MER20 DNA MER1_type 0 219 2 2421 81 3 0 chr17 70506649 70506944 -14931536 + AluSp SINE Alu 1 296 -17 2329 78 3 0 chr17 70507513 70507853 -14930627 + AluSp SINE Alu 1 341 0 2522 78 0 0 chr17 70508758 70509067 -14929413 + AluSq SINE Alu 1 309 -4 209 114 0 68 chr17 70509387 70509415 -14929065 + (TAA)n Simple_repeat Simple_repeat 1 28 -13 2168 114 0 0 chr17 70509415 70509725 -14928755 + AluSg SINE Alu 1 310 0 209 114 0 68 chr17 70509725 70509739 -14928741 + (TAA)n Simple_repeat Simple_repeat 28 41 0 1774 176 0 13 chr17 70510315 70510622 -14927858 + AluJo SINE Alu 1 303 -9 219 215 46 0 chr17 70510795 70510860 -14927620 + (CA)n Simple_repeat Simple_repeat 1 68 0 276 53 0 0 chr17 70514199 70514237 -14924243 + (TA)n Simple_repeat Simple_repeat 1 38 0 318 67 0 0 chr17 70515866 70515911 -14922569 + (TC)n Simple_repeat Simple_repeat 1 45 0 1251 169 0 9 chr17 70516216 70516441 -14922039 + AluSg/x SINE Alu 85 307 -5 2475 49 21 0 chr17 70516451 70516739 -14921741 + AluY SINE Alu 1 294 -17 1921 130 27 20 chr17 70516998 70517299 -14921181 - AluJb SINE Alu -9 303 1 2232 89 3 16 chr17 70517835 70518138 -14920342 + AluSc SINE Alu 1 299 -10 781 153 21 28 chr17 70518280 70518424 -14920056 + FLAM_C SINE Alu 1 143 0 897 272 17 20 chr17 70519485 70519786 -14918694 - L1ME4a LINE L1 -298 5823 5524 282 116 0 0 chr17 70520249 70520292 -14918188 + (A)n Simple_repeat Simple_repeat 1 43 0 2095 125 3 7 chr17 70520606 70520910 -14917570 - AluSx SINE Alu -9 303 1 1187 166 14 168 chr17 70520953 70521069 -14917411 - L1MD2 LINE L1 -19 6340 6208 2287 100 0 10 chr17 70521069 70521368 -14917112 + AluSx SINE Alu 1 296 -16 1187 166 14 168 chr17 70521368 70521436 -14917044 - L1MD2 LINE L1 -151 6208 6131 1946 140 7 7 chr17 70521436 70521728 -14916752 + AluJb SINE Alu 1 292 -20 1187 166 14 168 chr17 70521728 70521929 -14916551 - L1MD2 LINE L1 -228 6131 5984 42 36 0 0 chr17 70522043 70522099 -14916381 + AT_rich Low_complexity Low_complexity 1 56 0 2245 95 3 0 chr17 70522194 70522479 -14916001 - AluSx SINE Alu -26 286 1 1908 125 6 52 chr17 70522485 70522556 -14915924 - L1MB4 LINE L1 -44 6136 6063 2039 127 34 0 chr17 70522556 70522847 -14915633 - AluSx SINE Alu -11 301 1 1908 125 6 52 chr17 70522847 70522996 -14915484 - L1MB4 LINE L1 -117 6063 5933 2819 78 8 0 chr17 70522996 70523357 -14915123 - THE1B LTR MaLR 0 364 1 1908 125 6 52 chr17 70523357 70523463 -14915017 - L1MB4 LINE L1 -247 5933 5824 2198 151 37 42 chr17 70523527 70523916 -14914564 - MSTB1 LTR MaLR 0 432 44 2287 114 0 0 chr17 70523916 70524213 -14914267 + AluSx SINE Alu 3 299 -13 2198 151 37 42 chr17 70524213 70524255 -14914225 - MSTB1 LTR MaLR -388 44 3 1953 175 0 0 chr17 70524304 70524613 -14913867 - AluJb SINE Alu -3 309 1 295 207 0 0 chr17 70524653 70524711 -14913769 + MIR SINE MIR 81 138 -70 2038 159 0 0 chr17 70524856 70525157 -14913323 + AluJo SINE Alu 1 301 -11 2299 98 3 19 chr17 70525236 70525551 -14912929 + AluSg SINE Alu 1 310 0 1892 130 30 3 chr17 70525561 70525860 -14912620 + AluSx SINE Alu 3 309 -3 1549 160 28 38 chr17 70526524 70526848 -14911632 + AluJb SINE Alu 1 321 0 1473 181 7 34 chr17 70527459 70527751 -14910729 - AluJo SINE Alu -18 294 11 2261 100 3 3 chr17 70527753 70528063 -14910417 - AluSg SINE Alu 0 310 1 22 35 0 0 chr17 70528275 70528304 -14910176 + AT_rich Low_complexity Low_complexity 1 29 0 1933 135 38 0 chr17 70528758 70529047 -14909433 + AluSx SINE Alu 1 300 -12 224 146 0 21 chr17 70529278 70529326 -14909154 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 2130 93 26 38 chr17 70529390 70529703 -14908777 + AluSq SINE Alu 1 309 -4 640 130 179 68 chr17 70530039 70530142 -14908338 + MER53 DNA DNA 10 100 -89 2228 118 0 3 chr17 70530142 70530431 -14908049 + AluSx SINE Alu 1 288 -24 204 97 0 0 chr17 70530431 70530462 -14908018 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 640 130 179 68 chr17 70530462 70530519 -14907961 + MER53 DNA DNA 99 189 0 548 283 112 19 chr17 70530522 70530791 -14907689 - L2 LINE L2 -514 2800 2507 * 830 301 105 27 chr17 70530787 70531312 -14907168 + L2 LINE L2 2178 2743 -571 234 0 0 0 chr17 70531312 70531338 -14907142 + (T)n Simple_repeat Simple_repeat 1 26 0 2013 112 0 50 chr17 70531339 70531662 -14906818 + AluSg SINE Alu 1 307 -3 3739 148 37 0 chr17 70531662 70532290 -14906190 + L1MB3 LINE L1 5490 6140 -43 2161 122 0 0 chr17 70532290 70532586 -14905894 + AluSx SINE Alu 1 296 -16 834 148 0 15 chr17 70532594 70532729 -14905751 + FLAM_A SINE Alu 1 133 0 973 64 0 64 chr17 70532753 70532893 -14905587 + AluSc SINE Alu 1 131 -178 310 74 37 0 chr17 70532914 70532968 -14905512 + L1MB4 LINE L1 6125 6180 0 2326 79 3 23 chr17 70534047 70534352 -14904128 + AluSq SINE Alu 1 299 -14 2379 78 10 3 chr17 70534352 70534661 -14903819 + AluY SINE Alu 1 311 0 183 215 0 123 chr17 70534678 70534743 -14903737 + L2 LINE L2 2589 2645 -669 2013 139 34 0 chr17 70534865 70535160 -14903320 + AluJb SINE Alu 1 305 -7 1118 153 0 23 chr17 70535370 70535547 -14902933 + AluJo SINE Alu 75 247 -65 1360 128 0 0 chr17 70537709 70537896 -14900584 + AluSx SINE Alu 1 187 -125 1983 106 0 0 chr17 70537897 70538151 -14900329 - AluSg SINE Alu -56 254 1 2461 80 3 0 chr17 70538893 70539193 -14899287 - AluSq SINE Alu -12 301 1 230 297 0 16 chr17 70539296 70539360 -14899120 + MIR3 SINE MIR 125 187 -21 23 54 0 0 chr17 70539923 70539960 -14898520 + AT_rich Low_complexity Low_complexity 1 37 0 208 233 219 0 chr17 70540748 70540821 -14897659 + MIR SINE MIR 43 131 -77 253 179 125 0 chr17 70540900 70540956 -14897524 - MER103 DNA DNA -15 151 89 1627 159 10 30 chr17 70541287 70541583 -14896897 - AluJo SINE Alu -22 290 1 2535 72 3 0 chr17 70541598 70541903 -14896577 - AluSp SINE Alu -6 307 2 2314 110 3 0 chr17 70541970 70542279 -14896201 - AluSg SINE Alu 0 310 1 977 214 16 0 chr17 70542318 70542510 -14895970 + AluSg/x SINE Alu 98 292 -18 2242 107 7 0 chr17 70542925 70543224 -14895256 - AluSx SINE Alu -11 301 1 2281 82 10 20 chr17 70543372 70543676 -14894804 + AluY SINE Alu 1 301 -10 226 200 100 17 chr17 70544298 70544358 -14894122 + MER116 DNA Mariner 8 72 -8 1654 158 20 40 chr17 70544396 70544700 -14893780 + AluJo SINE Alu 7 304 -8 2187 75 18 4 chr17 70545984 70546262 -14892218 + AluSp SINE Alu 14 295 -18 1325 137 188 19 chr17 70546275 70546531 -14891949 + AluSg SINE Alu 2 300 0 2302 85 0 0 chr17 70546571 70546878 -14891602 + AluY SINE Alu 1 307 0 314 304 79 44 chr17 70546883 70547110 -14891370 - MIR SINE MIR -27 235 1 477 265 35 66 chr17 70547208 70547465 -14891015 - L1MC4a LINE L1 -1817 5991 5743 269 125 0 0 chr17 70547481 70547529 -14890951 - L1MB5 LINE L1 0 6174 6127 208 173 39 19 chr17 70547552 70547604 -14890876 + T-rich Low_complexity Low_complexity 2 54 0 928 199 13 69 chr17 70547652 70547675 -14890805 - L1MB5 LINE L1 -85 6089 6066 2216 98 0 71 chr17 70547675 70548011 -14890469 - AluSq SINE Alu -1 312 1 928 199 13 69 chr17 70548011 70548177 -14890303 - L1MB5 LINE L1 -108 6066 5913 2402 65 0 3 chr17 70548177 70548471 -14890009 - AluY SINE Alu -18 293 1 928 199 13 69 chr17 70548471 70548511 -14889969 - L1MB5 LINE L1 -261 5913 5872 388 160 3 0 chr17 70548559 70548631 -14889849 - AluJ/FLAM SINE Alu -242 60 2 4274 207 126 34 chr17 70548631 70548830 -14889650 - L1MB5 LINE L1 -300 5874 5695 2252 85 0 14 chr17 70548830 70549152 -14889328 - AluY SINE Alu 0 311 1 4274 207 126 34 chr17 70549152 70549237 -14889243 - L1MB5 LINE L1 -479 5695 5619 1202 126 0 0 chr17 70549237 70549411 -14889069 - L1MA3 LINE L1 0 6305 6132 4274 207 126 34 chr17 70549411 70549844 -14888636 - L1MB5 LINE L1 -555 5619 5228 2188 34 45 0 chr17 70549844 70550108 -14888372 - AluY SINE Alu 0 311 36 4274 207 126 34 chr17 70550108 70550793 -14887687 - L1MB5 LINE L1 -946 5228 4608 2045 117 7 32 chr17 70550793 70551101 -14887379 + AluSx SINE Alu 1 300 -12 4274 207 126 34 chr17 70551101 70551872 -14886608 - L1MB5 LINE L1 -1566 4608 3483 446 147 0 13 chr17 70552189 70552296 -14886184 - FLAM_A SINE Alu 0 142 46 865 224 0 6 chr17 70552379 70552553 -14885927 + FAM SINE Alu 2 174 -1 217 343 10 10 chr17 70552856 70552958 -14885522 + L2 LINE L2 3153 3254 -18 30 69 0 0 chr17 70553130 70553188 -14885292 + AT_rich Low_complexity Low_complexity 1 58 0 894 116 0 27 chr17 70553882 70554028 -14884452 + FLAM_C SINE Alu 1 142 -1 830 104 0 83 chr17 70556267 70556411 -14882069 + FLAM_C SINE Alu 1 132 -1 2162 113 7 0 chr17 70557672 70557963 -14880517 + AluSx SINE Alu 1 293 -19 2405 88 3 0 chr17 70558047 70558343 -14880137 + AluSp SINE Alu 2 298 -15 1066 197 22 95 chr17 70558616 70558789 -14879691 - AluJo SINE Alu -9 303 162 2299 114 0 0 chr17 70558789 70559086 -14879394 - AluSx SINE Alu -13 299 3 1066 197 22 95 chr17 70559086 70559227 -14879253 - AluJo SINE Alu -150 162 12 253 0 26 26 chr17 70559263 70559301 -14879179 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1879 133 32 4 chr17 70559303 70559582 -14878898 - AluSx SINE Alu -25 287 1 1166 302 98 4 chr17 70559611 70560151 -14878329 - L1MC4a LINE L1 -1964 5844 5254 251 271 37 0 chr17 70560336 70560443 -14878037 - L1P LINE L1 -1116 5030 4920 21 0 0 0 chr17 70560652 70560673 -14877807 + AT_rich Low_complexity Low_complexity 1 21 0 1440 146 10 94 chr17 70560683 70560991 -14877489 + AluJo SINE Alu 6 287 -25 23 33 0 0 chr17 70560991 70561021 -14877459 + AT_rich Low_complexity Low_complexity 1 30 0 1970 155 3 3 chr17 70562332 70562629 -14875851 + AluSx SINE Alu 1 297 -15 2372 77 10 7 chr17 70562631 70562930 -14875550 + AluSp SINE Alu 1 300 -13 422 18 0 18 chr17 70563024 70563080 -14875400 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1728 97 0 9 chr17 70563093 70563319 -14875161 - AluY SINE Alu -87 224 1 1670 110 0 0 chr17 70563349 70563567 -14874913 - AluSx SINE Alu -94 218 1 2054 135 0 16 chr17 70563993 70564297 -14874183 - AluSx SINE Alu -11 301 3 2214 117 3 0 chr17 70564713 70565013 -14873467 + AluSq SINE Alu 1 301 -12 974 227 63 49 chr17 70565175 70565523 -14872957 - L1MC4 LINE L1 -1 8041 7689 1621 171 23 29 chr17 70565974 70566284 -14872196 + AluJb SINE Alu 5 312 0 1991 135 7 0 chr17 70566297 70566578 -14871902 + AluSx SINE Alu 7 289 -23 1758 176 14 3 chr17 70567043 70567338 -14871142 - AluSx SINE Alu -14 298 1 2426 98 0 3 chr17 70567348 70567654 -14870826 - AluSg SINE Alu -5 305 1 1613 101 9 0 chr17 70567730 70567947 -14870533 + AluSg/x SINE Alu 84 302 -10 369 189 74 32 chr17 70567948 70568043 -14870437 - LTR8 LTR ERV1 -592 99 1 959 144 46 0 chr17 70568049 70568222 -14870258 + L1MA8 LINE L1 6078 6258 -33 341 175 14 4 chr17 70568272 70568331 -14870149 + AluJo SINE Alu 1 41 -262 3825 208 95 56 chr17 70568331 70569423 -14869057 + LTR28 LTR ERV1 1 636 0 1365 143 65 0 chr17 70569427 70569658 -14868822 + AluJo SINE Alu 50 295 -17 2362 101 7 3 chr17 70569719 70570026 -14868454 - AluSc SINE Alu -1 308 1 387 292 84 20 chr17 70570325 70570494 -14867986 + L2 LINE L2 2196 2381 -933 2326 111 0 0 chr17 70570494 70570800 -14867680 - AluSp SINE Alu -7 306 1 387 292 84 20 chr17 70570800 70570832 -14867648 + L2 LINE L2 2381 2410 -904 272 293 0 27 chr17 70570923 70570998 -14867482 + LTR28 LTR ERV1 827 899 -121 285 274 83 25 chr17 70571014 70571171 -14867309 + L2 LINE L2 2560 2725 -589 776 179 0 0 chr17 70571262 70571396 -14867084 + FLAM_C SINE Alu 6 139 -4 2027 128 0 4 chr17 70571400 70571681 -14866799 + AluSx SINE Alu 1 280 -32 254 98 20 0 chr17 70571681 70571732 -14866748 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 1709 147 11 62 chr17 70571742 70572095 -14866385 + L1MB5 LINE L1 5827 6161 -13 1823 154 34 0 chr17 70572154 70572446 -14866034 + AluJb SINE Alu 1 302 -10 2086 95 0 28 chr17 70572600 70572883 -14865597 + AluSg SINE Alu 25 299 -11 1531 177 134 45 chr17 70572883 70573030 -14865450 + LTR48 LTR ERV1 28 160 -627 1892 219 37 98 chr17 70573030 70573383 -14865097 + LTR8 LTR ERV1 1 287 -404 2548 66 0 0 chr17 70573383 70573686 -14864794 - AluY SINE Alu -8 303 1 1892 219 37 98 chr17 70573686 70574068 -14864412 + LTR8 LTR ERV1 287 691 0 1531 177 134 45 chr17 70574068 70574344 -14864136 + LTR48 LTR ERV1 160 489 -298 266 195 149 0 chr17 70574370 70574457 -14864023 + LTR48 LTR ERV1 641 740 -47 1109 151 0 78 chr17 70574465 70574683 -14863797 - AluSg/x SINE Alu -10 302 102 1879 130 0 0 chr17 70574683 70574952 -14863528 + AluSx SINE Alu 35 303 -9 2141 139 0 0 chr17 70575018 70575321 -14863159 - AluSx SINE Alu -9 303 1 2336 101 0 0 chr17 70575612 70575909 -14862571 - AluSq SINE Alu -16 297 1 1928 131 50 3 chr17 70576186 70576469 -14862011 - AluSx SINE Alu -16 296 1 1394 225 0 31 chr17 70576497 70576786 -14861694 - AluJo SINE Alu -30 282 3 747 154 0 0 chr17 70576787 70576904 -14861576 - FLAM_C SINE Alu -8 135 19 346 255 0 29 chr17 70576905 70577019 -14861461 - MIR SINE MIR -63 145 49 2298 95 0 22 chr17 70578084 70578218 -14860262 + AluSg SINE Alu 1 136 -174 2455 59 0 13 chr17 70578218 70578551 -14859929 + AluY SINE Alu 1 311 0 2298 95 0 22 chr17 70578551 70578731 -14859749 + AluSg SINE Alu 136 308 -2 23 33 0 0 chr17 70578979 70579009 -14859471 + AT_rich Low_complexity Low_complexity 1 30 0 288 196 0 72 chr17 70579050 70579147 -14859333 + L1MC5 LINE L1 7441 7530 -431 621 176 56 16 chr17 70579147 70579272 -14859208 + AluJo/FLAM SINE Alu 2 131 -171 2423 54 0 17 chr17 70579275 70579602 -14858878 + AluY SINE Alu 1 311 0 2072 125 9 34 chr17 70579714 70580034 -14858446 - AluSx SINE Alu 0 312 1 1280 200 29 4 chr17 70580115 70580390 -14858090 - AluJo SINE Alu -30 282 1 237 271 200 0 chr17 70580467 70580537 -14857943 + L1ME4a LINE L1 5518 5601 -520 2311 107 3 0 chr17 70580543 70580842 -14857638 + AluSx SINE Alu 1 300 -12 995 145 6 30 chr17 70580842 70581008 -14857472 + AluSc SINE Alu 132 293 -16 690 268 125 4 chr17 70581021 70581293 -14857187 + L1ME4a LINE L1 5611 5915 -206 2487 77 3 3 chr17 70581372 70581682 -14856798 - AluSg SINE Alu 0 310 1 207 0 0 0 chr17 70581899 70581922 -14856558 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 2076 128 0 7 chr17 70581922 70582211 -14856269 - AluSx SINE Alu -25 287 1 2291 132 28 6 chr17 70582844 70583200 -14855280 + THE1B LTR MaLR 1 364 0 334 188 10 98 chr17 70583542 70583701 -14854779 - MLT1J LTR MaLR -308 180 1 1681 197 0 7 chr17 70583758 70584062 -14854418 - AluJb SINE Alu -10 302 1 2082 129 0 16 chr17 70584074 70584383 -14854097 - AluSx SINE Alu -8 304 1 395 303 132 18 chr17 70584433 70584674 -14853806 + L2 LINE L2 2790 3058 -255 2149 136 0 3 chr17 70584674 70584976 -14853504 - AluSx SINE Alu -11 301 1 2179 117 3 13 chr17 70584976 70585284 -14853196 - AluSx SINE Alu -7 305 1 2401 84 0 0 chr17 70585337 70585633 -14852847 - AluSg SINE Alu -10 300 5 190 220 60 20 chr17 70585745 70585795 -14852685 + MIR SINE MIR 204 255 -7 2133 87 7 4 chr17 70585804 70586079 -14852401 - AluSp SINE Alu -37 276 1 2281 85 3 16 chr17 70586079 70586384 -14852096 - AluY SINE Alu -10 301 1 2083 144 0 0 chr17 70586387 70586679 -14851801 - AluSx SINE Alu -20 292 1 2606 119 46 7 chr17 70586862 70587274 -14851206 + MSTA LTR MaLR 1 428 0 2330 84 16 3 chr17 70587591 70587900 -14850580 - AluSq SINE Alu 0 313 1 1832 168 9 19 chr17 70587906 70588221 -14850259 - AluSx SINE Alu 0 312 1 1887 128 92 4 chr17 70588551 70588832 -14849648 - AluSx SINE Alu -6 306 1 2849 29 12 9 chr17 70588966 70589308 -14849172 - L1PA6 LINE L1 0 6154 5812 2336 95 0 16 chr17 70589627 70589942 -14848538 + AluSx SINE Alu 3 312 0 1888 122 66 3 chr17 70590142 70590428 -14848052 + AluSx SINE Alu 1 304 -8 1818 165 3 10 chr17 70590497 70590788 -14847692 - AluJo SINE Alu -23 289 1 1356 104 0 117 chr17 70591557 70591741 -14846739 - AluSg/x SINE Alu -17 295 140 2492 41 0 14 chr17 70591741 70592032 -14846448 - AluY SINE Alu -24 287 1 1356 104 0 117 chr17 70592032 70592069 -14846411 - AluSg/x SINE Alu -172 140 100 2050 170 0 0 chr17 70592069 70592380 -14846100 - AluJb SINE Alu -1 311 1 3088 102 73 68 chr17 70592557 70592603 -14845877 - MER4B LTR ERV1 0 610 566 2272 113 7 0 chr17 70592603 70592913 -14845567 - AluSx SINE Alu 0 312 1 3088 102 73 68 chr17 70592913 70593455 -14845025 - MER4B LTR ERV1 -44 566 19 2110 142 0 19 chr17 70593455 70593773 -14844707 - AluSx SINE Alu 0 312 1 2614 50 0 0 chr17 70594055 70594355 -14844125 + AluY SINE Alu 1 300 -11 1778 168 23 16 chr17 70594575 70594885 -14843595 - AluJo SINE Alu 0 312 1 934 128 0 0 chr17 70595208 70595341 -14843139 + FLAM_C SINE Alu 1 133 0 195 167 0 0 chr17 70595379 70595409 -14843071 + L2 LINE L2 3262 3291 -22 2447 96 0 0 chr17 70595431 70595733 -14842747 + AluSq SINE Alu 1 302 -11 2271 117 0 3 chr17 70595918 70596052 -14842428 + AluSx SINE Alu 1 134 -178 2513 79 3 0 chr17 70596052 70596357 -14842123 + AluSp SINE Alu 1 306 -7 2271 117 0 3 chr17 70596357 70596522 -14841958 + AluSx SINE Alu 134 299 -13 2731 30 0 0 chr17 70596527 70596830 -14841650 + AluYa5 SINE Alu 1 303 -8 1987 162 3 3 chr17 70597299 70597607 -14840873 - AluSx SINE Alu -4 308 1 30 27 0 0 chr17 70597607 70597644 -14840836 + AT_rich Low_complexity Low_complexity 1 37 0 327 208 115 21 chr17 70597644 70597740 -14840740 - MLT2C1 LTR ERVL -143 254 150 1970 127 0 14 chr17 70597764 70598047 -14840433 - AluJb SINE Alu -33 279 1 753 110 7 69 chr17 70598048 70598130 -14840350 - MLT2C1 LTR ERVL -235 162 91 2338 84 47 0 chr17 70598130 70598428 -14840052 + AluSx SINE Alu 1 312 0 753 110 7 69 chr17 70598428 70598490 -14839990 - MLT2C1 LTR ERVL -306 91 27 1765 161 7 4 chr17 70598738 70599018 -14839462 + AluJo SINE Alu 9 289 -23 2366 108 3 0 chr17 70599138 70599444 -14839036 + AluSx SINE Alu 1 307 -5 2550 65 0 0 chr17 70599445 70599751 -14838729 + AluY SINE Alu 1 306 -5 1564 169 3 37 chr17 70599865 70600160 -14838320 + AluJb SINE Alu 14 298 -14 2373 110 0 0 chr17 70600288 70600597 -14837883 - AluSc SINE Alu 0 309 1 195 125 0 0 chr17 70600644 70600684 -14837796 + (TA)n Simple_repeat Simple_repeat 1 40 0 205 200 25 62 chr17 70600710 70600758 -14837722 + (CTTAA)n Simple_repeat Simple_repeat 4 49 -31 1700 160 54 14 chr17 70600758 70601052 -14837428 - AluSg SINE Alu -4 306 1 205 200 25 62 chr17 70601052 70601083 -14837397 + (CTTAA)n Simple_repeat Simple_repeat 49 80 0 326 200 27 40 chr17 70601256 70601331 -14837149 + Alu SINE Alu 1 53 -255 1242 124 6 0 chr17 70601331 70601500 -14836980 - AluSg/x SINE Alu -9 301 132 2141 110 17 0 chr17 70601500 70601790 -14836690 - AluSp SINE Alu -18 295 1 348 178 36 50 chr17 70601795 70601889 -14836591 + L1MCa LINE L1 1995 6984 -1338 222 187 33 0 chr17 70601956 70602047 -14836433 + (TA)n Simple_repeat Simple_repeat 1 94 0 1010 108 0 0 chr17 70602195 70602334 -14836146 - MER54B LTR ERVL -111 682 544 410 86 0 0 chr17 70602368 70602426 -14836054 - MER83B LTR ERV1 -28 350 293 1602 142 76 3 chr17 70603049 70603337 -14835143 - MER83B LTR ERV1 -69 309 1 * 2916 180 30 2 chr17 70603337 70603855 -14834625 - MER54B LTR ERVL -260 533 1 2176 131 0 3 chr17 70603893 70604198 -14834282 + AluSx SINE Alu 1 304 -8 406 78 62 16 chr17 70604335 70604399 -14834081 - AluSc SINE Alu -20 289 223 905 97 5 118 chr17 70604503 70604573 -14833907 + HSMAR2 DNA Mariner 1137 1213 -89 2522 66 0 3 chr17 70604573 70604874 -14833606 - AluSq SINE Alu -9 304 5 905 97 5 118 chr17 70604874 70604989 -14833491 + HSMAR2 DNA Mariner 1213 1301 -1 672 192 34 14 chr17 70604990 70605136 -14833344 - MIR SINE MIR -111 151 3 777 154 4 2 chr17 70605162 70605415 -14833065 + AluJ SINE Alu 1 302 -10 2299 89 0 7 chr17 70605622 70605915 -14832565 + AluY SINE Alu 9 299 -12 201 74 0 0 chr17 70605927 70605954 -14832526 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1719 164 0 0 chr17 70605992 70606261 -14832219 + AluSx SINE Alu 43 311 -1 319 182 23 80 chr17 70606417 70606505 -14831975 - MLT1K LTR MaLR 0 588 506 1858 148 20 23 chr17 70606507 70606811 -14831669 + AluSx SINE Alu 1 303 -9 2295 120 10 0 chr17 70607028 70607336 -14831144 + AluSx SINE Alu 1 311 -1 714 243 68 85 chr17 70607409 70607821 -14830659 + MLT1J2 LTR MaLR 3 407 -43 2066 144 0 3 chr17 70607917 70608216 -14830264 + AluSx SINE Alu 1 298 -14 2454 80 0 10 chr17 70608216 70608530 -14829950 + AluY SINE Alu 1 311 0 358 296 19 13 chr17 70608633 70608792 -14829688 + L1ME LINE L1 5637 5796 -325 180 0 0 0 chr17 70609233 70609253 -14829227 + (CAGGG)n Simple_repeat Simple_repeat 3 22 0 1970 153 3 10 chr17 70609279 70609451 -14829029 - AluSx SINE Alu -6 306 135 2369 78 10 3 chr17 70609451 70609747 -14828733 - AluSp SINE Alu -15 298 1 1970 153 3 10 chr17 70609747 70609882 -14828598 - AluSx SINE Alu -177 135 1 2056 122 7 7 chr17 70609893 70610179 -14828301 - AluSx SINE Alu -26 286 1 198 182 0 0 chr17 70610179 70610212 -14828268 - MER5B DNA MER1_type -128 50 18 2404 96 0 0 chr17 70610790 70611091 -14827389 - AluSc SINE Alu -8 301 1 2459 57 3 3 chr17 70611565 70611862 -14826618 - AluY SINE Alu -14 297 1 1979 153 7 0 chr17 70612004 70612304 -14826176 - AluJo SINE Alu -9 303 2 2315 110 10 0 chr17 70612667 70612975 -14825505 - AluSx SINE Alu -1 311 1 1804 144 43 0 chr17 70613173 70613450 -14825030 - AluJb SINE Alu -23 289 1 923 107 0 0 chr17 70613492 70613613 -14824867 + AluSp/q SINE Alu 182 302 -11 1468 184 37 46 chr17 70614089 70614550 -14823930 - MLT2B3 LTR ERVL 0 554 1 1876 141 7 23 chr17 70614592 70614897 -14823583 + AluJo SINE Alu 1 300 -12 1507 126 156 15 chr17 70614897 70615167 -14823313 + AluSg1 SINE Alu 1 308 -1 2407 61 7 0 chr17 70615836 70616131 -14822349 + AluY SINE Alu 7 303 -8 1779 136 6 62 chr17 70616782 70617105 -14821375 + AluJb SINE Alu 1 305 -7 841 180 7 0 chr17 70617123 70617262 -14821218 - FRAM SINE Alu -26 150 11 2179 137 3 0 chr17 70617274 70617573 -14820907 - AluJb SINE Alu -12 300 1 1074 154 36 122 chr17 70617839 70617967 -14820513 - L1MB7 LINE L1 -16 6168 6031 2239 95 0 11 chr17 70617967 70618250 -14820230 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr17 70618252 70618278 -14820202 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1074 154 36 122 chr17 70618278 70618471 -14820009 - L1MB7 LINE L1 -154 6030 5822 3645 182 19 41 chr17 70618471 70618531 -14819949 - L1MB3 LINE L1 0 6183 6123 1945 135 7 10 chr17 70618531 70618820 -14819660 - AluJb SINE Alu -22 290 3 3645 182 19 41 chr17 70618820 70618989 -14819491 - L1MB3 LINE L1 -60 6123 5952 2301 103 0 7 chr17 70618989 70619291 -14819189 - AluSg SINE Alu -10 300 1 3645 182 19 41 chr17 70619291 70619844 -14818636 - L1MB3 LINE L1 -231 5952 5417 1074 154 36 122 chr17 70619844 70619855 -14818625 - L1MB7 LINE L1 -361 5823 5861 2001 125 32 0 chr17 70619883 70620164 -14818316 + AluSq SINE Alu 1 290 -23 2400 93 0 0 chr17 70620219 70620520 -14817960 + AluSx SINE Alu 1 301 -11 2213 128 3 0 chr17 70620667 70620973 -14817507 + AluSx SINE Alu 1 307 -5 875 141 0 8 chr17 70620979 70621107 -14817373 + FLAM_C SINE Alu 1 127 -16 23 33 0 0 chr17 70621108 70621138 -14817342 + AT_rich Low_complexity Low_complexity 1 30 0 387 269 0 94 chr17 70621175 70621267 -14817213 - MIR SINE MIR -18 244 172 2482 50 3 7 chr17 70621267 70621565 -14816915 - AluY SINE Alu -14 297 1 387 269 0 94 chr17 70621565 70621632 -14816848 - MIR SINE MIR -90 172 100 207 139 0 0 chr17 70621634 70621670 -14816810 + (TA)n Simple_repeat Simple_repeat 2 37 0 547 247 51 45 chr17 70621819 70621969 -14816511 - MIR SINE MIR -7 255 102 2136 133 0 0 chr17 70621969 70622255 -14816225 + AluSx SINE Alu 1 286 -26 547 247 51 45 chr17 70622255 70622282 -14816198 - MIR SINE MIR -160 102 77 393 302 23 16 chr17 70622320 70622449 -14816031 + L2 LINE L2 2945 3074 -239 281 182 0 0 chr17 70622464 70622508 -14815972 + L2 LINE L2 3268 3311 -2 1239 124 11 0 chr17 70622735 70622912 -14815568 - AluSg/x SINE Alu 0 310 132 2473 85 0 0 chr17 70622912 70623219 -14815261 - AluSg SINE Alu -3 307 1 189 0 0 0 chr17 70623219 70623240 -14815240 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2311 92 0 0 chr17 70623240 70623522 -14814958 - AluSx SINE Alu -30 282 1 537 284 80 23 chr17 70623849 70624025 -14814455 + MIR SINE MIR 49 234 -28 2196 99 36 7 chr17 70624066 70624369 -14814111 - AluSq SINE Alu -1 312 1 1734 180 0 30 chr17 70624374 70624679 -14813801 - AluJo SINE Alu -16 296 1 1909 161 30 3 chr17 70624772 70625071 -14813409 - AluSx SINE Alu -5 307 1 683 180 0 0 chr17 70625448 70625559 -14812921 + MER81 DNA DNA 3 113 -1 198 0 0 0 chr17 70625764 70625786 -14812694 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 183 291 78 19 chr17 70625827 70625930 -14812550 - L2 LINE L2 -1055 2259 2151 1916 163 7 0 chr17 70625991 70626292 -14812188 + AluJb SINE Alu 1 303 -9 1092 67 0 8 chr17 70626297 70626431 -14812049 + AluSq/x SINE Alu 14 146 -166 2257 104 0 10 chr17 70626431 70626738 -14811742 + AluY SINE Alu 1 304 -7 2019 143 0 7 chr17 70627010 70627310 -14811170 + AluSx SINE Alu 1 298 -14 2064 160 0 3 chr17 70627410 70627723 -14810757 - AluJb SINE Alu 0 312 1 285 237 54 21 chr17 70627816 70627909 -14810571 - MIR3 SINE MIR -2 206 111 399 41 0 0 chr17 70628177 70628226 -14810254 + (TG)n Simple_repeat Simple_repeat 1 49 0 2227 114 0 3 chr17 70628254 70628552 -14809928 + AluSx SINE Alu 1 297 -15 207 0 0 0 chr17 70628552 70628575 -14809905 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2604 56 13 0 chr17 70628798 70629103 -14809377 - AluSp SINE Alu -4 309 1 808 176 11 74 chr17 70629272 70629412 -14809068 + FRAM SINE Alu 2 130 -172 2302 89 0 35 chr17 70629412 70629728 -14808752 - AluSg SINE Alu -5 305 1 808 176 11 74 chr17 70629728 70629763 -14808717 + FRAM SINE Alu 130 166 0 231 337 12 23 chr17 70630067 70630153 -14808327 - MIR3 SINE MIR -49 159 75 1018 188 0 17 chr17 70630294 70630470 -14808010 - FRAM SINE Alu -3 173 1 426 215 44 22 chr17 70630688 70630823 -14807657 + LTR67 LTR ERVL 332 469 -88 2354 107 0 0 chr17 70630871 70631169 -14807311 + AluSx SINE Alu 1 298 -14 2321 116 0 10 chr17 70631191 70631502 -14806978 + AluSg SINE Alu 2 309 -1 180 311 14 27 chr17 70631512 70631586 -14806894 - L2 LINE L2 -3237 77 5 1032 78 0 0 chr17 70631775 70631904 -14806576 + AluSp/q SINE Alu 173 301 -12 2226 117 40 0 chr17 70631989 70632288 -14806192 + AluSx SINE Alu 1 311 -1 632 314 40 42 chr17 70632292 70632646 -14805834 + ERVL LTR ERVL 3035 3387 -2377 2019 136 3 13 chr17 70632738 70633040 -14805440 + AluSx SINE Alu 1 299 -13 726 126 90 9 chr17 70633180 70633291 -14805189 - FLAM_C SINE Alu -12 121 2 2121 130 20 0 chr17 70633367 70633667 -14804813 - AluSx SINE Alu -6 306 1 291 163 0 0 chr17 70633699 70633748 -14804732 - Alu SINE Alu -11 291 243 1884 178 0 10 chr17 70633815 70634124 -14804356 + AluJb SINE Alu 3 308 -4 2410 100 0 0 chr17 70634163 70634464 -14804016 - AluSx SINE Alu -9 303 3 1911 128 43 0 chr17 70634669 70634951 -14803529 - AluSq SINE Alu -19 294 1 455 154 26 0 chr17 70634980 70635058 -14803422 + AluJ/FLAM SINE Alu 2 81 -231 2001 134 17 0 chr17 70635141 70635432 -14803048 - AluSx SINE Alu -16 296 1 283 316 11 11 chr17 70635433 70635528 -14802952 + MER102b DNA MER1_type 229 323 -18 2227 78 3 69 chr17 70635682 70636001 -14802479 - AluSg SINE Alu -11 299 2 1842 158 3 3 chr17 70636018 70636302 -14802178 - AluJb SINE Alu -28 284 1 21 36 0 0 chr17 70637474 70637502 -14800978 + GC_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr17 70637821 70637847 -14800633 + GC_rich Low_complexity Low_complexity 1 26 0 219 143 0 54 chr17 70637861 70637917 -14800563 + (CGGGGG)n Simple_repeat Simple_repeat 4 56 0 206 113 0 57 chr17 70637980 70638033 -14800447 + (GGA)n Simple_repeat Simple_repeat 2 51 0 2352 94 0 0 chr17 70639792 70640091 -14798389 - AluSg SINE Alu -11 299 1 2284 107 3 0 chr17 70640389 70640689 -14797791 - AluSp SINE Alu -12 301 1 270 320 117 0 chr17 70640745 70640848 -14797632 + L2 LINE L2 3154 3268 -4 208 104 42 42 chr17 70640958 70641006 -14797474 + T-rich Low_complexity Low_complexity 1 48 0 1005 118 0 21 chr17 70641199 70641343 -14797137 - L1PA8A LINE L1 0 6131 5991 206 98 49 0 chr17 70642482 70642523 -14795957 + GA-rich Low_complexity Low_complexity 3 45 0 2291 95 7 0 chr17 70643753 70644049 -14794431 - AluSg SINE Alu -12 298 1 2401 169 53 56 chr17 70644393 70644645 -14793835 - L1MB7 LINE L1 0 6184 5933 2239 96 0 35 chr17 70644645 70644958 -14793522 - AluSg SINE Alu -8 302 1 2401 169 53 56 chr17 70644958 70645107 -14793373 - L1MB7 LINE L1 -251 5933 5785 774 187 0 58 chr17 70645107 70645246 -14793234 - FLAM_A SINE Alu -1 132 2 2401 169 53 56 chr17 70645246 70645412 -14793068 - L1MB7 LINE L1 -399 5785 5618 2178 111 13 0 chr17 70645429 70645727 -14792753 - AluSx SINE Alu -8 304 3 1554 216 63 51 chr17 70646051 70646541 -14791939 - L1MDa LINE L1 -3269 2946 2451 695 135 111 139 chr17 70646728 70646792 -14791688 - MER3 DNA MER1_type 0 209 145 1468 185 17 17 chr17 70646792 70647084 -14791396 + AluJo SINE Alu 1 292 -20 695 135 111 139 chr17 70647084 70647227 -14791253 - MER3 DNA MER1_type -64 145 8 2457 73 3 0 chr17 70647525 70647825 -14790655 - AluY SINE Alu -10 301 1 578 225 42 0 chr17 70648442 70648584 -14789896 + L1M4 LINE L1 2441 2588 -3558 261 172 172 55 chr17 70649047 70649175 -14789305 - L1MC/D LINE L1 -2042 5766 5624 2184 113 0 7 chr17 70649269 70649570 -14788910 - AluSx SINE Alu -13 299 1 361 217 70 26 chr17 70649828 70649907 -14788573 + MIR3 SINE MIR 88 175 -33 1083 189 82 5 chr17 70649907 70650113 -14788367 - MER58A DNA MER1_type 0 224 3 361 217 70 26 chr17 70650113 70650148 -14788332 + MIR3 SINE MIR 175 207 -1 1799 152 14 10 chr17 70650345 70650635 -14787845 - AluSx SINE Alu -20 292 2 407 254 95 98 chr17 70651016 70651405 -14787075 - L1M4 LINE L1 -2001 4145 3758 2114 190 67 60 chr17 70651448 70651965 -14786515 - L1ME1 LINE L1 -297 5869 5346 1742 172 7 17 chr17 70651965 70652267 -14786213 - AluJb SINE Alu -13 299 1 2114 190 67 60 chr17 70652267 70652332 -14786148 - L1ME1 LINE L1 -820 5346 5283 364 135 27 0 chr17 70652346 70652420 -14786060 + CT-rich Low_complexity Low_complexity 1 76 0 1700 155 10 40 chr17 70652420 70652723 -14785757 - AluJb SINE Alu -18 294 1 856 158 6 22 chr17 70652726 70652909 -14785571 - L1ME1 LINE L1 -846 5300 5121 2393 88 0 3 chr17 70652986 70653292 -14785188 + AluSp SINE Alu 1 305 -8 21 57 0 0 chr17 70653299 70653334 -14785146 + AT_rich Low_complexity Low_complexity 1 35 0 815 179 0 0 chr17 70653444 70653561 -14784919 - FLAM_C SINE Alu -25 118 2 635 199 146 43 chr17 70653563 70654009 -14784471 - L1MDa LINE L1 -3937 2278 1887 209 228 13 0 chr17 70654049 70654128 -14784352 + (TA)n Simple_repeat Simple_repeat 1 80 0 734 207 135 64 chr17 70654597 70654978 -14783502 + L1MDa LINE L1 1705 2087 -4339 576 218 0 0 chr17 70654991 70655170 -14783310 + (TA)n Simple_repeat Simple_repeat 1 179 0 308 163 0 0 chr17 70655175 70655224 -14783256 - AluS SINE Alu -19 281 233 904 115 0 0 chr17 70655226 70655348 -14783132 - AluSq/x SINE Alu -172 140 19 211 139 0 23 chr17 70655372 70655415 -14783065 + (TA)n Simple_repeat Simple_repeat 2 43 0 228 253 13 0 chr17 70655419 70655498 -14782982 + L1MC4 LINE L1 6614 6693 -1349 1209 232 91 67 chr17 70655506 70655614 -14782866 - L1MC4 LINE L1 -401 7641 7537 2490 84 3 0 chr17 70655614 70655924 -14782556 - AluSq SINE Alu -2 311 1 1967 128 0 78 chr17 70655930 70656110 -14782370 - AluSx SINE Alu -3 309 165 2479 54 3 0 chr17 70656110 70656405 -14782075 - AluY SINE Alu -15 296 1 1967 128 0 78 chr17 70656405 70656559 -14781921 - AluSx SINE Alu -147 165 1 1209 232 91 67 chr17 70656559 70656599 -14781881 - L1MC4 LINE L1 -509 7533 7495 2354 99 3 0 chr17 70656599 70656901 -14781579 - AluSp SINE Alu -10 303 1 1209 232 91 67 chr17 70656901 70657283 -14781197 - L1MC4 LINE L1 -547 7495 7090 1811 150 11 3 chr17 70657349 70657635 -14780845 + AluJo SINE Alu 1 288 -24 227 161 36 0 chr17 70657635 70657691 -14780789 + (TA)n Simple_repeat Simple_repeat 1 58 0 662 178 0 0 chr17 70658067 70658168 -14780312 + AluJ/FLAM SINE Alu 2 102 -210 596 143 19 38 chr17 70658262 70658367 -14780113 + MER3 DNA MER1_type 1 103 -106 1861 160 14 0 chr17 70658565 70658859 -14779621 - AluSx SINE Alu -14 298 1 568 218 82 36 chr17 70658896 70659087 -14779393 + MIR SINE MIR 44 242 -20 2267 92 3 0 chr17 70659091 70659386 -14779094 + AluSx SINE Alu 1 296 -16 1314 97 11 0 chr17 70659386 70659561 -14778919 + AluY SINE Alu 133 309 -2 22 0 0 0 chr17 70660443 70660465 -14778015 + AT_rich Low_complexity Low_complexity 1 22 0 388 284 121 7 chr17 70660996 70661137 -14777343 - MER5A DNA MER1_type -1 188 32 313 230 230 0 chr17 70661156 70661256 -14777224 - MER5A DNA MER1_type -6 183 61 379 136 76 102 chr17 70661449 70661514 -14776966 + MER5A DNA MER1_type 3 68 -121 2169 111 0 10 chr17 70661514 70661812 -14776668 + AluSx SINE Alu 1 295 -17 379 136 76 102 chr17 70661812 70661884 -14776596 + MER5A DNA MER1_type 68 189 0 250 276 171 9 chr17 70662014 70662119 -14776361 - L2 LINE L2 -4 3309 3188 2093 130 13 0 chr17 70662225 70662525 -14775955 - AluSg SINE Alu -6 304 1 392 276 79 24 chr17 70662531 70662697 -14775783 - L1ME3A LINE L1 -301 5869 5695 4726 72 40 17 chr17 70662713 70663309 -14775171 - LTR66 LTR ERVL 0 610 1 455 184 112 92 chr17 70663351 70663547 -14774933 - MER112 DNA MER1_type -55 205 6 467 295 21 26 chr17 70663592 70663782 -14774698 - L1ME3A LINE L1 -588 5574 5386 24 0 0 0 chr17 70664100 70664124 -14774356 + AT_rich Low_complexity Low_complexity 1 24 0 468 256 148 58 chr17 70664321 70664712 -14773768 - L1MC4a LINE L1 -321 5800 5520 1956 102 4 4 chr17 70664712 70664976 -14773504 + AluSx SINE Alu 1 264 -48 207 0 0 0 chr17 70665454 70665477 -14773003 + (TTA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr17 70665563 70665585 -14772895 + AT_rich Low_complexity Low_complexity 1 22 0 2176 138 0 0 chr17 70666877 70667182 -14771298 + AluSx SINE Alu 1 305 -7 2436 256 145 64 chr17 70667713 70669008 -14769472 - HAL1 LINE L1 -985 1522 334 2487 62 3 19 chr17 70669008 70669317 -14769163 - AluY SINE Alu -5 306 3 1954 142 0 10 chr17 70669325 70669621 -14768859 - AluJb SINE Alu -14 298 6 2436 256 145 64 chr17 70669621 70669634 -14768846 - HAL1 LINE L1 -2179 328 317 2410 87 3 3 chr17 70669634 70669944 -14768536 - AluSg SINE Alu 0 310 1 2436 256 145 64 chr17 70669944 70670004 -14768476 - HAL1 LINE L1 -2190 317 32 968 119 0 0 chr17 70670303 70670437 -14768043 + AluSg/x SINE Alu 173 306 -6 450 212 30 0 chr17 70670881 70670980 -14767500 - MIR SINE MIR -9 253 152 38 0 0 0 chr17 70670980 70671018 -14767462 + AT_rich Low_complexity Low_complexity 1 38 0 1637 186 7 0 chr17 70671019 70671304 -14767176 - AluJo SINE Alu -25 287 1 343 257 0 0 chr17 70671306 70671376 -14767104 - MIR SINE MIR -100 162 93 832 107 8 25 chr17 70672592 70672713 -14765767 - FLAM_C SINE Alu -18 125 7 455 312 188 23 chr17 70672840 70673186 -14765294 + L2 LINE L2 2251 2653 -661 1833 117 89 3 chr17 70673192 70673474 -14765006 - AluSq SINE Alu -7 306 1 2265 108 3 0 chr17 70673829 70674134 -14764346 - AluSx SINE Alu -6 306 1 1014 257 24 16 chr17 70674182 70674431 -14764049 - MIR SINE MIR 0 262 12 628 193 83 143 chr17 70674495 70674773 -14763707 - MLT1D LTR MaLR -2 503 213 661 120 34 8 chr17 70674777 70674894 -14763586 - MLT1C-int LTR MaLR -1249 122 3 1828 173 84 43 chr17 70674900 70675136 -14763344 - MLT1C LTR MaLR -6 461 236 2105 98 16 16 chr17 70675136 70675442 -14763038 - AluSc SINE Alu -3 306 1 1828 173 84 43 chr17 70675442 70675644 -14762836 - MLT1C LTR MaLR -231 236 5 2217 121 0 6 chr17 70676102 70676416 -14762064 + AluSx SINE Alu 1 312 0 1234 129 89 49 chr17 70676564 70676653 -14761827 - MER46A DNA MER2_type -2496 235 151 2147 95 0 7 chr17 70676653 70676964 -14761516 - AluY SINE Alu 0 309 1 1234 129 89 49 chr17 70676964 70677097 -14761383 - MER46A DNA MER2_type -2580 151 3 462 240 90 89 chr17 70677205 70677461 -14761019 - MIR SINE MIR 0 262 2 962 184 0 6 chr17 70677825 70677988 -14760492 + FRAM SINE Alu 1 155 -21 1756 180 104 3 chr17 70678646 70678962 -14759518 - MER7A DNA MER2_type 0 346 1 2825 160 65 7 chr17 70679190 70679728 -14758752 - L1MC3 LINE L1 0 7785 7217 275 274 12 12 chr17 70679750 70679834 -14758646 - MLT1D LTR MaLR -439 128 45 544 128 105 145 chr17 70679837 70680009 -14758471 - L1MC3 LINE L1 -682 7103 6939 861 236 6 6 chr17 70680217 70680395 -14758085 + MER8 DNA MER2_type 2 179 -60 340 222 0 0 chr17 70680370 70680433 -14758047 + MER2 DNA MER2_type 282 344 -1 * 501 196 95 0 chr17 70680774 70680922 -14757558 - MER54B LTR ERVL -631 162 1 1790 148 10 7 chr17 70680960 70681263 -14757217 + AluSx SINE Alu 1 304 -8 2082 106 14 7 chr17 70681403 70681685 -14756795 - AluSg SINE Alu -23 287 4 657 162 88 20 chr17 70681933 70682081 -14756399 - Looper DNA T2_type 0 1558 1401 321 188 152 45 chr17 70682083 70682195 -14756285 + L2 LINE L2 1636 1759 -1555 207 0 0 0 chr17 70682201 70682224 -14756256 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1015 218 16 44 chr17 70682226 70682395 -14756085 - AluJo SINE Alu -29 283 122 1776 124 92 0 chr17 70682395 70682668 -14755812 + AluSx SINE Alu 1 298 -14 1015 218 16 44 chr17 70682668 70682750 -14755730 - AluJo SINE Alu -190 122 39 3075 257 48 18 chr17 70682750 70683294 -14755186 + L2 LINE L2 1752 2333 -981 1758 170 6 25 chr17 70683294 70683612 -14754868 - AluJb SINE Alu 0 312 1 3075 257 48 18 chr17 70683612 70683936 -14754544 + L2 LINE L2 2333 2646 -668 1940 162 0 7 chr17 70683944 70684253 -14754227 - AluSx SINE Alu -5 307 1 1140 132 20 20 chr17 70684306 70684503 -14753977 + HSMAR2 DNA Mariner 2 198 -1104 1119 162 0 0 chr17 70684510 70684677 -14753803 - AluJb SINE Alu -17 295 129 2055 132 0 0 chr17 70684691 70684972 -14753508 - AluSq SINE Alu -32 281 1 3560 77 4 22 chr17 70684973 70685397 -14753083 - L1P5 LINE L1 -367 5784 5369 2473 87 0 0 chr17 70685397 70685706 -14752774 - AluSg SINE Alu -1 309 1 3560 77 4 22 chr17 70685706 70685774 -14752706 - L1P5 LINE L1 -782 5369 5301 2602 86 11 119 chr17 70685774 70686013 -14752467 + HSMAR2 DNA Mariner 778 1041 -261 2238 88 0 72 chr17 70686013 70686344 -14752136 - AluSx SINE Alu -5 307 1 2602 86 11 119 chr17 70686344 70686383 -14752097 + HSMAR2 DNA Mariner 1041 1083 -219 2525 62 0 3 chr17 70686383 70686690 -14751790 - AluY SINE Alu -5 306 1 2602 86 11 119 chr17 70686690 70686723 -14751757 + HSMAR2 DNA Mariner 1083 1118 -184 2086 136 3 0 chr17 70686723 70687018 -14751462 - AluSx SINE Alu -16 296 1 2602 86 11 119 chr17 70687018 70687096 -14751384 + HSMAR2 DNA Mariner 1118 1115 -187 2257 119 0 3 chr17 70687096 70687398 -14751082 + AluSx SINE Alu 2 302 -10 2602 86 11 119 chr17 70687398 70687468 -14751012 + HSMAR2 DNA Mariner 1114 1190 -112 1770 134 8 0 chr17 70687662 70687916 -14750564 - AluSq SINE Alu -57 256 1 882 162 14 54 chr17 70687927 70688149 -14750331 - L1MC/D LINE L1 -2521 5474 5262 * 2137 214 53 2 chr17 70688131 70688641 -14749839 - L1MC/D LINE L1 -1293 4853 4318 2398 88 0 7 chr17 70888948 70889254 -14549226 + AluSx SINE Alu 2 305 -7 1993 116 49 3 chr17 70889562 70889871 -14548609 - AluSx SINE Alu 0 312 2 180 0 0 0 chr17 70889874 70889894 -14548586 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 396 200 0 0 chr17 70889894 70889974 -14548506 + MER63 DNA MER1_type 932 1011 -50 353 330 85 6 chr17 70889988 70890164 -14548316 - MER91A DNA MER1_type -6 190 1 476 229 19 0 chr17 70890195 70890300 -14548180 + MER3 DNA MER1_type 5 111 -98 276 30 0 0 chr17 70890307 70890340 -14548140 + (TG)n Simple_repeat Simple_repeat 2 34 0 2442 87 0 0 chr17 70890521 70890820 -14547660 - AluSx SINE Alu -13 299 1 274 281 97 45 chr17 70891209 70891476 -14547004 - L1MEd LINE L1 -4862 1257 977 1842 99 0 0 chr17 70891578 70891810 -14546670 - AluSq SINE Alu -80 233 2 358 247 170 56 chr17 70892048 70892142 -14546338 - MIR SINE MIR -1 261 179 544 68 96 0 chr17 70892142 70892215 -14546265 - MADE1 DNA Mariner 0 80 1 358 247 170 56 chr17 70892215 70892346 -14546134 - MIR SINE MIR -83 179 7 198 333 22 33 chr17 70892343 70892433 -14546047 + MER5A DNA MER1_type 9 97 -92 * 564 139 0 0 chr17 70892452 70892538 -14545942 + AluJ/FRAM SINE Alu 221 306 -6 27 0 0 0 chr17 70892680 70892707 -14545773 + AT_rich Low_complexity Low_complexity 1 27 0 2018 149 0 7 chr17 70892707 70893002 -14545478 - AluSx SINE Alu -19 293 1 535 103 0 0 chr17 70893002 70893070 -14545410 - AluS SINE Alu -226 87 20 2306 163 68 24 chr17 70893528 70893621 -14544859 + Charlie1b DNA MER1_type 5 92 -2669 2244 115 3 0 chr17 70893621 70893916 -14544564 + AluSg SINE Alu 1 296 -14 2306 163 68 24 chr17 70893916 70894318 -14544162 + Charlie1b DNA MER1_type 92 522 -1 354 238 124 47 chr17 70894450 70894643 -14543837 - L2 LINE L2 -2 3311 3104 214 304 16 16 chr17 70895643 70895768 -14542712 + L2 LINE L2 2196 2320 -994 1112 186 0 42 chr17 70895882 70896097 -14542383 + AluJb SINE Alu 86 291 -21 1562 79 0 33 chr17 70896208 70896422 -14542058 - AluY SINE Alu -104 207 1 2046 93 3 50 chr17 70896658 70896959 -14541521 - AluSx SINE Alu -25 287 1 2099 147 0 0 chr17 70897590 70897902 -14540578 - AluSx SINE Alu 0 312 1 3924 152 32 33 chr17 70897948 70898672 -14539808 - L1MB5 LINE L1 0 6174 5452 295 256 12 12 chr17 70900261 70900343 -14538137 + MER112 DNA MER1_type 2 83 -177 334 240 50 20 chr17 70900369 70900469 -14538011 + MER112 DNA MER1_type 158 260 0 2060 139 7 7 chr17 70901057 70901358 -14537122 - AluSx SINE Alu -11 301 1 2362 127 12 0 chr17 70901874 70902220 -14536260 - MER1A DNA MER1_type -44 485 136 217 312 67 81 chr17 70902541 70902826 -14535654 - L2 LINE L2 -26 3246 2966 460 279 123 0 chr17 70902868 70903047 -14535433 - MIR SINE MIR -14 248 48 21 0 0 0 chr17 70903144 70903165 -14535315 + AT_rich Low_complexity Low_complexity 1 21 0 3379 229 76 39 chr17 70903585 70903831 -14534649 - L1M4 LINE L1 -983 5163 4927 2176 128 0 0 chr17 70903831 70904135 -14534345 + AluSx SINE Alu 1 304 -8 3379 229 76 39 chr17 70904135 70904212 -14534268 - L1M4 LINE L1 -1219 4927 4854 2457 96 3 3 chr17 70904212 70904525 -14533955 + AluSp SINE Alu 1 313 0 3379 229 76 39 chr17 70904525 70905345 -14533135 - L1M4 LINE L1 -1292 4854 3977 2209 120 0 0 chr17 70906578 70906879 -14531601 + AluSq SINE Alu 1 301 -12 2152 96 34 3 chr17 70907641 70907932 -14530548 + AluSc SINE Alu 1 300 -9 339 136 0 0 chr17 70907934 70907993 -14530487 + (GGGA)n Simple_repeat Simple_repeat 3 61 0 261 274 37 55 chr17 70908027 70908191 -14530289 + HAL1 LINE L1 2344 2504 -3 310 250 23 11 chr17 70908222 70908310 -14530170 + L1MEd LINE L1 3 91 -6028 202 172 35 0 chr17 70908426 70908484 -14529996 + (TTATA)n Simple_repeat Simple_repeat 3 62 0 343 245 42 110 chr17 70908646 70908841 -14529639 + L1M4 LINE L1 2785 2963 -3183 2005 126 23 16 chr17 70908841 70909151 -14529329 + AluSx SINE Alu 1 312 0 343 245 42 110 chr17 70909151 70909192 -14529288 + L1M4 LINE L1 2963 3005 -3141 705 244 48 59 chr17 70909340 70909611 -14528869 - L1M4 LINE L1 -2082 4064 3797 1980 100 52 3 chr17 70909697 70909987 -14528493 - AluSc SINE Alu -5 304 1 2259 93 0 0 chr17 70910780 70911086 -14527394 + AluSg SINE Alu 1 306 0 251 170 0 0 chr17 70911148 70911195 -14527285 - MER45R DNA AcHobo -585 996 950 690 179 8 22 chr17 70911207 70911341 -14527139 - AluJo SINE Alu -178 134 3 487 184 28 57 chr17 70911342 70911483 -14526997 - MER45R DNA AcHobo -622 959 823 * 1918 162 56 17 chr17 70911433 70911646 -14526834 + MER45R DNA AcHobo 1123 1326 -255 2116 127 3 0 chr17 70911646 70911937 -14526543 - AluSx SINE Alu -20 292 1 1918 162 56 17 chr17 70911937 70912137 -14526343 + MER45R DNA AcHobo 1326 1552 -29 1803 109 0 0 chr17 70913265 70913527 -14524953 - AluSq SINE Alu 0 314 53 2193 115 0 10 chr17 70913922 70914218 -14524262 - AluSq SINE Alu -20 293 1 405 218 26 0 chr17 70914220 70914298 -14524182 - ORSL DNA AcHobo -195 80 1 190 204 20 20 chr17 70914705 70914754 -14523726 + L3b LINE CR1 1530 1578 -5 2356 108 0 0 chr17 70915785 70916091 -14522389 - AluSx SINE Alu -6 306 1 207 279 81 0 chr17 70916350 70916436 -14522044 - MIR SINE MIR -7 255 163 2581 147 26 14 chr17 70916448 70916876 -14521604 + Tigger7 DNA MER2_type 1 433 -300 2009 138 0 3 chr17 70916876 70917158 -14521322 + AluSx SINE Alu 1 281 -31 37005 30 2 0 chr17 70917258 70922402 -14516078 + L1PA3 LINE L1 1004 6155 0 6255 151 25 12 chr17 70922515 70924633 -14513847 + L1PB1 LINE L1 4015 6150 -1 554 203 0 26 chr17 70924638 70924791 -14513689 + L1 LINE L1 2272 2420 -3726 4237 214 28 13 chr17 70924792 70925771 -14512709 + L1 LINE L1 4093 5085 -1061 942 230 184 0 chr17 70925742 70926046 -14512434 + L1M4 LINE L1 3497 3856 -2290 * 288 229 14 0 chr17 70926089 70926159 -14512321 + L1ME2 LINE L1 6071 6141 -23 5480 36 0 0 chr17 70926173 70926816 -14511664 + L1PA5 LINE L1 5511 6153 -1 2119 74 0 26 chr17 70927753 70928024 -14510456 - AluSg SINE Alu -1 309 46 449 300 59 34 chr17 70928027 70928264 -14510216 - MER90 LTR ERV1 -52 562 320 339 246 55 18 chr17 70928472 70928582 -14509898 + MER103 DNA DNA 4 117 -49 565 291 108 30 chr17 70928652 70929050 -14509430 + L2 LINE L2 2872 3300 -13 222 37 0 0 chr17 70929052 70929079 -14509401 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 273 346 19 10 chr17 70931653 70931757 -14506723 + Charlie8 DNA MER1_type 1 105 -2312 924 165 59 99 chr17 70932228 70932351 -14506129 + MER33 DNA MER1_type 12 138 -2447 1895 101 97 0 chr17 70932351 70932619 -14505861 + AluSg SINE Alu 1 294 -16 924 165 59 99 chr17 70932619 70932817 -14505663 + MER33 DNA MER1_type 138 320 -4 317 40 0 80 chr17 70933564 70933614 -14504866 - MADE1 DNA Mariner -34 46 1 265 279 169 19 chr17 70934139 70934293 -14504187 + MIR SINE MIR 66 242 -20 296 136 0 45 chr17 70934834 70934922 -14503558 + (CGGGG)n Simple_repeat Simple_repeat 1 84 0 1518 137 0 0 chr17 70935025 70935237 -14503243 - AluSg SINE Alu -98 212 1 189 283 0 0 chr17 70936394 70936440 -14502040 - MER5B DNA MER1_type -131 47 2 2173 122 23 0 chr17 70936545 70936848 -14501632 + AluSx SINE Alu 1 310 -2 2250 126 0 0 chr17 70937732 70938034 -14500446 - AluSx SINE Alu -10 302 1 2135 116 3 13 chr17 70938866 70939169 -14499311 - AluSx SINE Alu -12 300 1 1855 136 16 38 chr17 70940276 70940484 -14497996 - AluJb SINE Alu -3 309 109 1937 164 132 0 chr17 70940484 70940862 -14497618 - MSTA LTR MaLR 0 428 1 1855 136 16 38 chr17 70940862 70940969 -14497511 - AluJb SINE Alu -203 109 1 274 311 48 10 chr17 70940975 70941078 -14497402 + L2 LINE L2 3164 3270 -2 2277 96 26 3 chr17 70942303 70942606 -14495874 - AluY SINE Alu -1 310 1 1750 148 0 50 chr17 70942649 70942952 -14495528 + AluJo SINE Alu 24 311 -1 1865 153 7 10 chr17 70943835 70944130 -14494350 + AluJb SINE Alu 1 294 -18 193 287 316 7 chr17 70944328 70944464 -14494016 + MER5B DNA MER1_type 1 178 0 2422 84 3 0 chr17 70945104 70945401 -14493079 + AluSx SINE Alu 8 305 -7 266 185 31 0 chr17 70945421 70945486 -14492994 + GA-rich Low_complexity Low_complexity 3 69 0 2194 110 0 7 chr17 70946904 70947228 -14491252 + AluSx SINE Alu 1 322 0 2206 121 0 3 chr17 70947826 70948123 -14490357 - AluSx SINE Alu -4 308 13 453 200 111 30 chr17 70949731 70949866 -14488614 + L1ME4a LINE L1 5963 6108 -13 289 291 115 27 chr17 70950470 70950618 -14487862 - MIR3 SINE MIR -10 198 38 3864 156 47 12 chr17 70950663 70951389 -14487091 - L1MB8 LINE L1 -2 6176 5426 2227 111 3 0 chr17 70951417 70951714 -14486766 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr17 70952344 70952368 -14486112 + (T)n Simple_repeat Simple_repeat 1 24 0 1850 152 10 13 chr17 70952745 70953048 -14485432 - AluSx SINE Alu -10 302 1 189 0 0 0 chr17 70953283 70953304 -14485176 + (CA)n Simple_repeat Simple_repeat 2 22 0 2231 85 39 0 chr17 70953314 70953597 -14484883 - AluSx SINE Alu -17 295 2 2271 89 3 20 chr17 70955098 70955401 -14483079 - AluSx SINE Alu -14 298 1 201 138 0 0 chr17 70955439 70955468 -14483012 + (CA)n Simple_repeat Simple_repeat 2 30 0 2383 76 43 7 chr17 70956251 70956552 -14481928 + AluSx SINE Alu 1 312 0 333 0 0 0 chr17 70956952 70956989 -14481491 + (A)n Simple_repeat Simple_repeat 1 37 0 648 295 129 0 chr17 70957442 70957666 -14480814 + MIR SINE MIR 9 261 -1 373 80 0 0 chr17 70958213 70958263 -14480217 - Alu SINE Alu -238 70 21 313 245 96 0 chr17 70958263 70958357 -14480123 - MLT1E2 LTR MaLR -53 573 471 362 214 56 22 chr17 70958360 70958449 -14480031 - MLT1E2 LTR MaLR -388 238 147 343 294 0 11 chr17 70959398 70959490 -14478990 - MIR SINE MIR -75 187 97 244 303 118 17 chr17 70959712 70959831 -14478649 - MIR3 SINE MIR -34 174 44 2411 100 0 0 chr17 70960861 70961160 -14477320 + AluSx SINE Alu 1 299 -13 180 200 44 22 chr17 70962166 70962211 -14476269 + L2 LINE L2 3252 3297 -16 2090 123 10 17 chr17 70962219 70962521 -14475959 + AluJb SINE Alu 3 302 -10 1811 143 0 29 chr17 70962564 70962869 -14475611 + AluJb SINE Alu 13 309 0 1997 81 0 0 chr17 70963143 70963391 -14475089 + AluSx SINE Alu 51 298 -14 2116 132 0 7 chr17 70963915 70964211 -14474269 + AluSx SINE Alu 1 294 -18 632 168 0 44 chr17 70964232 70964345 -14474135 + FLAM_A SINE Alu 20 127 -15 2029 121 0 54 chr17 70965229 70965543 -14472937 + AluJo SINE Alu 1 297 -15 2351 103 0 3 chr17 70965854 70966156 -14472324 - AluSx SINE Alu -11 301 1 328 272 48 56 chr17 70967087 70967212 -14471268 + L3b LINE CR1 1278 1401 -182 2159 121 10 10 chr17 70967993 70968299 -14470181 - AluSx SINE Alu -6 306 1 2384 68 0 10 chr17 70968308 70968603 -14469877 - AluSg SINE Alu -18 292 1 233 217 0 0 chr17 70968666 70968712 -14469768 + (CATA)n Simple_repeat Simple_repeat 2 47 0 241 294 229 0 chr17 70969671 70969780 -14468700 + MER5A DNA MER1_type 56 189 0 298 343 10 0 chr17 70969899 70969998 -14468482 - MIR SINE MIR -6 256 157 348 280 0 109 chr17 70970628 70970758 -14467722 - MARNA DNA Mariner -33 553 453 1743 184 7 10 chr17 70970758 70971063 -14467417 - AluJo SINE Alu 0 312 9 348 280 0 109 chr17 70971063 70971143 -14467337 - MARNA DNA Mariner -133 453 366 2130 92 0 59 chr17 70971162 70971465 -14467015 - AluSg SINE Alu -20 290 6 264 289 12 0 chr17 70971611 70971694 -14466786 - MARNA DNA Mariner -376 210 127 304 258 101 0 chr17 70972513 70972602 -14465878 + L1ME LINE L1 530 627 -5443 3595 146 16 65 chr17 70972623 70972719 -14465761 + L1MCa LINE L1 19 118 -6308 2124 109 58 3 chr17 70972719 70973013 -14465467 + AluSg SINE Alu 1 310 0 3595 146 16 65 chr17 70973013 70973643 -14464837 + L1MCa LINE L1 118 710 -5716 * 6193 217 30 13 chr17 70973640 70976126 -14462354 + L1PBa LINE L1 1647 4270 -2592 2502 65 0 3 chr17 70976313 70976620 -14461860 + AluY SINE Alu 1 306 -5 1884 121 0 7 chr17 70976631 70976903 -14461577 + AluSg SINE Alu 39 308 -2 1938 168 7 3 chr17 70977815 70978118 -14460362 + AluJo SINE Alu 1 304 -8 195 355 28 19 chr17 70978334 70978352 -14460128 - MER5A DNA MER1_type -56 133 117 659 237 35 29 chr17 70978352 70978525 -14459955 - MER45A DNA AcHobo -4 174 1 195 355 28 19 chr17 70978525 70978613 -14459867 - MER5A DNA MER1_type -72 117 26 294 247 0 37 chr17 70980650 70980731 -14457749 + (TATATG)n Simple_repeat Simple_repeat 4 81 0 228 289 22 22 chr17 70980731 70980821 -14457659 - L1MC4 LINE L1 -1339 6703 6614 356 297 20 31 chr17 70980837 70981073 -14457407 + (TATATG)n Simple_repeat Simple_repeat 1 238 -429 2245 100 3 0 chr17 70981073 70981355 -14457125 + AluSx SINE Alu 3 288 -24 186 71 0 0 chr17 70981355 70981383 -14457097 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 356 297 20 31 chr17 70981389 70981512 -14456968 + (TATATG)n Simple_repeat Simple_repeat 238 667 0 2221 118 0 25 chr17 70982821 70983135 -14455345 + AluSx SINE Alu 1 306 -6 204 233 0 0 chr17 70983218 70983261 -14455219 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 268 311 5 79 chr17 70983292 70983482 -14454998 - L2 LINE L2 -56 3257 3082 1618 126 5 0 chr17 70983609 70983831 -14454649 - AluSx SINE Alu -89 223 1 393 230 214 24 chr17 70984248 70984374 -14454106 + MIR SINE MIR 2 151 -111 1675 127 0 40 chr17 70984386 70984485 -14453995 - MER44D DNA MER2_type -1883 604 648 1563 188 16 33 chr17 70984485 70984671 -14453809 - AluJo SINE Alu -11 301 120 210 37 0 0 chr17 70984671 70984698 -14453782 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1563 188 16 33 chr17 70984698 70984814 -14453666 - AluJo SINE Alu -192 120 4 1675 127 0 40 chr17 70984814 70984989 -14453491 - MER44D DNA MER2_type -1838 649 469 406 113 0 0 chr17 70984989 70985042 -14453438 + AluS SINE Alu 11 63 -255 367 105 0 18 chr17 70985120 70985177 -14453303 + AluJb SINE Alu 77 132 -170 2118 53 4 0 chr17 70985277 70985522 -14452958 - AluSg SINE Alu -64 246 1 183 307 67 13 chr17 70985522 70985597 -14452883 - L3 LINE CR1 -386 1191 1113 1026 202 14 40 chr17 70985705 70985928 -14452552 + MER20 DNA MER1_type 3 219 0 332 287 0 70 chr17 70985993 70986122 -14452358 + L2 LINE L2 3194 3313 0 1791 190 0 0 chr17 70986738 70987043 -14451437 + AluJo SINE Alu 1 305 -7 366 23 0 0 chr17 70987044 70987087 -14451393 + (TG)n Simple_repeat Simple_repeat 1 43 0 602 88 0 0 chr17 70987099 70987179 -14451301 - MADE1 DNA Mariner 0 80 1 582 103 0 0 chr17 70988574 70988661 -14449819 + (TCCCC)n Simple_repeat Simple_repeat 2 88 0 767 177 8 0 chr17 70988661 70988785 -14449695 - FLAM_C SINE Alu -8 125 1 234 246 0 0 chr17 70988882 70988943 -14449537 + (TCCA)n Simple_repeat Simple_repeat 4 64 0 236 248 344 6 chr17 70989329 70989486 -14448994 + L2 LINE L2 3104 3313 0 189 107 0 0 chr17 70989626 70989654 -14448826 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 815 239 22 86 chr17 70991713 70991922 -14446558 - MIR SINE MIR 0 262 72 2324 81 34 0 chr17 70991922 70992219 -14446261 + AluSg SINE Alu 1 307 -3 815 239 22 86 chr17 70992219 70992277 -14446203 - MIR SINE MIR -190 72 12 544 305 26 7 chr17 70992288 70992442 -14446038 - MER5B DNA MER1_type -2 176 20 480 297 121 18 chr17 70993061 70993226 -14445254 - MER5A DNA MER1_type -6 183 2 206 356 106 8 chr17 70993231 70993363 -14445117 + MIR SINE MIR 13 157 -105 1326 150 9 4 chr17 70993363 70993596 -14444884 - Tigger2a DNA MER2_type 0 444 211 1459 166 51 58 chr17 70993598 70993718 -14444762 + AluJo SINE Alu 1 120 -192 207 0 0 0 chr17 70993718 70993741 -14444739 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1459 166 51 58 chr17 70993741 70993933 -14444547 + AluJo SINE Alu 120 311 -1 325 39 39 0 chr17 70993936 70993987 -14444493 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 1224 128 0 75 chr17 70993988 70994214 -14444266 - Tigger2a DNA MER2_type -225 209 1 1486 139 3 112 chr17 70994589 70994928 -14443552 + AluJo SINE Alu 1 302 -10 1498 110 0 10 chr17 70997054 70997254 -14441226 + AluSg/x SINE Alu 98 295 -15 30 0 0 0 chr17 70997486 70997516 -14440964 + AT_rich Low_complexity Low_complexity 1 30 0 2089 134 0 45 chr17 70997526 70997839 -14440641 + AluJo SINE Alu 1 299 -13 951 154 0 7 chr17 70997845 70997994 -14440486 + FRAM SINE Alu 4 151 -15 189 0 0 0 chr17 70997995 70998016 -14440464 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 795 173 7 7 chr17 70998017 70998167 -14440313 + L1MB5 LINE L1 6022 6171 -3 224 294 15 0 chr17 70998169 70998237 -14440243 + L2 LINE L2 2712 2780 -534 755 205 46 0 chr17 70998462 70998613 -14439867 + MER3 DNA MER1_type 52 209 0 891 229 22 0 chr17 70998623 70998806 -14439674 - MER5A DNA MER1_type -2 187 1 463 298 155 0 chr17 70998875 70999036 -14439444 + MER5A DNA MER1_type 3 188 -1 329 255 117 0 chr17 70999039 70999133 -14439347 + L2 LINE L2 3191 3295 -18 2258 116 13 10 chr17 70999236 70999547 -14438933 - AluSx SINE Alu 0 312 1 2658 52 0 0 chr17 70999934 71000241 -14438239 - AluY SINE Alu -4 307 1 202 292 157 11 chr17 71000398 71000487 -14437993 - MIR SINE MIR -76 132 31 2315 100 3 10 chr17 71000588 71000897 -14437583 + AluSq SINE Alu 1 307 -6 2435 84 0 63 chr17 71000904 71001237 -14437243 + AluSx SINE Alu 1 312 0 2169 122 124 5 chr17 71001407 71001777 -14436703 + MSTA LTR MaLR 1 414 -14 220 155 17 17 chr17 71001828 71001886 -14436594 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 808 262 86 35 chr17 71002115 71002546 -14435934 - L1ME4a LINE L1 -98 6023 5571 324 251 72 90 chr17 71002709 71002777 -14435703 + MIR SINE MIR 57 125 -137 2418 43 27 13 chr17 71002777 71003077 -14435403 - AluY SINE Alu -7 304 1 324 251 72 90 chr17 71003077 71003175 -14435305 + MIR SINE MIR 125 220 -42 1993 125 4 0 chr17 71003802 71004081 -14434399 + AluSx SINE Alu 1 280 -32 182 33 67 0 chr17 71004081 71004111 -14434369 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 202 226 38 0 chr17 71004222 71004275 -14434205 + CT-rich Low_complexity Low_complexity 4 58 0 467 245 122 14 chr17 71004325 71004472 -14434008 - MIR SINE MIR -9 253 91 2214 98 0 17 chr17 71004564 71004851 -14433629 - AluSx SINE Alu -18 294 13 280 257 43 0 chr17 71005840 71005910 -14432570 - MIR SINE MIR -114 148 76 2102 130 3 0 chr17 71006028 71006327 -14432153 - AluSq SINE Alu -13 300 1 636 218 9 118 chr17 71006964 71007053 -14431427 - MER3 DNA MER1_type -1 208 111 1609 173 21 12 chr17 71007053 71007383 -14431097 + L1MB3 LINE L1 5834 6166 -17 636 218 9 118 chr17 71007383 71007409 -14431071 - MER3 DNA MER1_type -98 111 84 276 30 0 0 chr17 71007409 71007442 -14431038 + (CA)n Simple_repeat Simple_repeat 2 34 0 636 218 9 118 chr17 71007442 71007554 -14430926 - MER3 DNA MER1_type -125 84 5 412 330 85 6 chr17 71007585 71007761 -14430719 + MER91A DNA MER1_type 1 190 -6 1322 221 26 32 chr17 71007775 71007855 -14430625 - MER63 DNA MER1_type -50 1012 933 180 0 0 0 chr17 71007855 71007875 -14430605 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2130 118 7 7 chr17 71007878 71008183 -14430297 + AluSx SINE Alu 2 306 -6 1322 221 26 32 chr17 71008183 71008442 -14430038 - MER63 DNA MER1_type -131 931 671 393 288 163 20 chr17 71008589 71008742 -14429738 + MIR SINE MIR 1 175 -87 2413 97 0 7 chr17 71008778 71009088 -14429392 - AluSx SINE Alu -4 308 1 249 277 62 67 chr17 71009370 71009470 -14429010 + L1ME4a LINE L1 5914 6014 -107 2019 96 52 4 chr17 71009470 71009765 -14428715 + AluSx SINE Alu 16 312 0 249 277 62 67 chr17 71009765 71009859 -14428621 + L1ME4a LINE L1 6014 6107 -14 2527 87 3 0 chr17 71010349 71010661 -14427819 + AluSp SINE Alu 1 313 0 234 336 136 0 chr17 71011040 71011150 -14427330 + L2 LINE L2 3129 3253 -19 204 40 0 0 chr17 71011153 71011178 -14427302 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 278 279 179 7 chr17 71011178 71011318 -14427162 - L2 LINE L2 -15 3298 3135 1053 135 145 5 chr17 71011340 71011540 -14426940 + MER46A DNA MER2_type 9 236 0 289 202 36 24 chr17 71012059 71012143 -14426337 - MLT1A2 LTR MaLR 0 365 281 193 28 0 56 chr17 71012154 71012190 -14426290 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2145 104 17 10 chr17 71012195 71012484 -14425996 - AluSq SINE Alu -22 291 1 207 0 0 0 chr17 71012525 71012548 -14425932 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 837 157 0 30 chr17 71012550 71012684 -14425796 - FLAM_C SINE Alu -13 130 1 860 193 106 51 chr17 71012684 71012938 -14425542 - MLT1A2 LTR MaLR -65 309 42 2372 99 0 0 chr17 71012991 71013294 -14425186 + AluSq SINE Alu 1 303 -10 247 170 57 19 chr17 71013557 71013610 -14424870 + L1M1 LINE L1 928 982 -6583 2532 56 0 40 chr17 71014885 71014925 -14423555 - AluY SINE Alu 0 311 271 213 39 0 0 chr17 71014925 71014951 -14423529 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2532 56 0 40 chr17 71014951 71015234 -14423246 - AluY SINE Alu -40 271 1 1205 197 13 92 chr17 71015245 71015416 -14423064 - AluJo SINE Alu -22 290 154 2273 113 0 0 chr17 71015416 71015709 -14422771 - AluSx SINE Alu -19 293 1 1205 197 13 92 chr17 71015709 71015852 -14422628 - AluJo SINE Alu -158 154 1 1929 169 3 6 chr17 71015881 71016194 -14422286 - AluJb SINE Alu 0 312 1 650 283 11 16 chr17 71016207 71016394 -14422086 + Charlie8 DNA MER1_type 80 265 -2152 1590 237 100 7 chr17 71016481 71016941 -14421539 + MLT1D LTR MaLR 3 505 0 254 311 23 76 chr17 71017666 71017798 -14420682 - MIR SINE MIR -69 193 69 2267 128 0 0 chr17 71017934 71018239 -14420241 + AluSx SINE Alu 1 305 -7 661 116 0 0 chr17 71018375 71018461 -14420019 + AluS SINE Alu 2 87 -225 2230 107 14 0 chr17 71018461 71018752 -14419728 + AluSq SINE Alu 1 295 -18 233 300 73 9 chr17 71018842 71018952 -14419528 + MIR SINE MIR 86 202 -60 1030 145 116 0 chr17 71019229 71019401 -14419079 - AluJo SINE Alu -7 305 114 27 0 0 0 chr17 71019948 71019975 -14418505 + AT_rich Low_complexity Low_complexity 1 27 0 2394 67 0 0 chr17 71020325 71020636 -14417844 - AluY SINE Alu 0 311 1 2194 115 7 0 chr17 71021243 71021538 -14416942 - AluSx SINE Alu -15 297 1 915 213 18 62 chr17 71021676 71021821 -14416659 - MER58A DNA MER1_type -2205 215 82 2017 137 33 7 chr17 71021821 71022120 -14416360 - AluSx SINE Alu -5 307 1 915 213 18 62 chr17 71022120 71022199 -14416281 - MER58A DNA MER1_type -2338 82 1 1115 110 0 0 chr17 71022410 71022556 -14415924 + AluSg/x SINE Alu 127 272 -38 222 235 20 0 chr17 71022833 71022884 -14415596 - MIR3 SINE MIR -48 160 109 247 322 11 0 chr17 71024832 71024922 -14413558 + L1MC4 LINE L1 7935 8025 -17 2153 123 0 0 chr17 71024975 71025260 -14413220 + AluSx SINE Alu 12 296 -16 807 118 0 8 chr17 71025815 71025934 -14412546 - AluJo SINE Alu -178 134 17 198 229 0 0 chr17 71026623 71026658 -14411822 + L2 LINE L2 3217 3251 -21 247 289 13 0 chr17 71026704 71026780 -14411700 + MLT1L LTR MaLR 1 77 -538 480 259 66 78 chr17 71026857 71027242 -14411238 + MLT1L LTR MaLR 126 615 0 2211 105 0 3 chr17 71027682 71027999 -14410481 + AluSx SINE Alu 1 312 0 1507 231 18 26 chr17 71028094 71028479 -14410001 - MER82 DNA MER2_type -3 650 269 2260 106 0 20 chr17 71028479 71028780 -14409700 + AluSx SINE Alu 1 295 -17 231 114 0 0 chr17 71028783 71028818 -14409662 + (TA)n Simple_repeat Simple_repeat 2 36 0 820 235 0 30 chr17 71028818 71029018 -14409462 - MER82 DNA MER2_type -459 194 1 2175 130 0 0 chr17 71029019 71029320 -14409160 + AluSx SINE Alu 1 301 -11 632 257 117 53 chr17 71029667 71030553 -14407927 + L1MC5 LINE L1 5972 6935 -1026 2098 137 0 3 chr17 71030553 71030859 -14407621 + AluSx SINE Alu 1 305 -7 632 257 117 53 chr17 71030859 71031126 -14407354 + L1MC5 LINE L1 6935 7184 -777 673 274 65 41 chr17 71031266 71031800 -14406680 + L1MC5 LINE L1 7252 7714 -247 1308 86 0 48 chr17 71031812 71031998 -14406482 - AluSg/x SINE Alu -1 311 135 246 266 119 37 chr17 71032180 71032289 -14406191 - L2 LINE L2 -1 3271 3154 566 198 77 101 chr17 71032375 71032582 -14405898 - MIR SINE MIR -52 210 9 248 155 0 17 chr17 71032896 71032954 -14405526 + (CA)n Simple_repeat Simple_repeat 2 58 0 2218 86 7 0 chr17 71033222 71033502 -14404978 + AluSp SINE Alu 1 282 -31 207 0 0 0 chr17 71033510 71033533 -14404947 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 519 367 106 14 chr17 71033599 71034237 -14404243 + L2 LINE L2 1987 2694 -620 2029 162 0 10 chr17 71034237 71034568 -14403912 - AluSx SINE Alu 0 312 1 519 367 106 14 chr17 71034568 71034619 -14403861 + L2 LINE L2 2694 2739 -575 2040 143 0 10 chr17 71034629 71034943 -14403537 + AluSx SINE Alu 1 311 -1 284 122 0 0 chr17 71034943 71034984 -14403496 + Alu SINE Alu 1 41 -259 2431 62 0 3 chr17 71035085 71035374 -14403106 - AluY SINE Alu -13 298 11 1696 136 0 8 chr17 71035416 71035666 -14402814 + AluJo SINE Alu 60 307 -5 1479 259 67 16 chr17 71035666 71036176 -14402304 + MLT1H1 LTR MaLR 18 553 -2 2398 66 3 3 chr17 71036969 71037310 -14401170 - AluSq SINE Alu 0 341 1 2275 85 0 39 chr17 71037321 71037627 -14400853 - AluY SINE Alu -17 294 1 328 239 0 0 chr17 71037641 71037712 -14400768 - MIR SINE MIR -4 258 188 5838 101 82 92 chr17 71037863 71038990 -14399490 + MER11C LTR ERVK 1 1071 0 1828 139 3 54 chr17 71038994 71039114 -14399366 + AluSx SINE Alu 1 126 -186 2182 88 22 0 chr17 71039114 71039478 -14399002 + AluY SINE Alu 3 372 0 1828 139 3 54 chr17 71039478 71039651 -14398829 + AluSx SINE Alu 126 280 -32 191 81 54 0 chr17 71039679 71039716 -14398764 + A-rich Low_complexity Low_complexity 2 40 0 484 219 109 8 chr17 71039720 71039848 -14398632 - MER45A DNA AcHobo -36 142 2 596 283 71 29 chr17 71040006 71040246 -14398234 + L2 LINE L2 2363 2612 -702 2341 118 0 0 chr17 71040423 71040727 -14397753 - AluSx SINE Alu -7 305 2 1238 77 87 0 chr17 71040760 71040943 -14397537 - MER30 DNA MER1_type -31 199 1 229 321 60 0 chr17 71040946 71041030 -14397450 + L2 LINE L2 2722 2810 -504 466 306 131 31 chr17 71041360 71041719 -14396761 + L2 LINE L2 2847 3241 -72 567 244 142 47 chr17 71042163 71042390 -14396090 + MIR SINE MIR 3 244 -18 1603 199 55 75 chr17 71042905 71043382 -14395098 + MLT1C LTR MaLR 1 467 0 397 273 148 63 chr17 71043881 71043962 -14394518 + L2 LINE L2 2809 2882 -431 2187 126 7 0 chr17 71043962 71044271 -14394209 - AluSq SINE Alu -2 311 1 397 273 148 63 chr17 71044271 71044588 -14393892 + L2 LINE L2 2882 3241 -72 312 191 29 0 chr17 71045017 71045085 -14393395 + MLT1K LTR MaLR 519 588 0 3824 113 17 4 chr17 71045093 71045613 -14392867 - MER1A DNA MER1_type 0 527 1 322 382 57 24 chr17 71045627 71045839 -14392641 - L2 LINE L2 -65 3207 2989 456 292 99 6 chr17 71045847 71046018 -14392462 - MIR SINE MIR -1 261 75 235 288 14 14 chr17 71046085 71046158 -14392322 - MIR SINE MIR -178 84 12 2387 93 10 0 chr17 71046564 71046865 -14391615 - AluSq SINE Alu -9 304 1 696 213 0 30 chr17 71046937 71047101 -14391379 + MLT1A2 LTR MaLR 3 161 -213 754 203 0 0 chr17 71047107 71047230 -14391250 + FLAM_C SINE Alu 2 124 -19 304 290 40 0 chr17 71047375 71047475 -14391005 + MIR SINE MIR 98 201 -61 180 0 0 0 chr17 71047599 71047619 -14390861 + (GA)n Simple_repeat Simple_repeat 2 21 0 325 102 34 0 chr17 71047630 71047689 -14390791 - AluJo SINE Alu -166 136 76 851 202 22 6 chr17 71047696 71047874 -14390606 + MLT1A2 LTR MaLR 190 370 -4 2395 76 33 7 chr17 71048008 71048309 -14390171 - AluSc SINE Alu 0 309 1 942 142 13 26 chr17 71049445 71049600 -14388880 - FAM SINE Alu 0 49 1 188 227 258 0 chr17 71049803 71049869 -14388611 + L2 LINE L2 2538 2620 -694 293 262 0 36 chr17 71050083 71050167 -14388313 + L2 LINE L2 3188 3268 -45 2127 117 3 13 chr17 71050352 71050651 -14387829 - AluSx SINE Alu -16 296 1 2453 87 0 0 chr17 71052539 71052839 -14385641 - AluSq SINE Alu -13 300 1 738 288 73 7 chr17 71053886 71054123 -14384357 - MIR SINE MIR -1 261 22 1114 294 88 9 chr17 71054165 71054620 -14383860 - L2 LINE L2 -12 3301 2811 2062 119 8 0 chr17 71054748 71055016 -14383464 + AluSx SINE Alu 24 293 -19 1858 141 58 4 chr17 71055119 71055396 -14383084 - AluJo SINE Alu -20 292 1 384 301 259 0 chr17 71055481 71055674 -14382806 + MIR SINE MIR 20 262 0 953 178 49 0 chr17 71055933 71056096 -14382384 - FRAM SINE Alu -6 170 1 2381 100 3 0 chr17 71056110 71056411 -14382069 - AluSx SINE Alu -10 302 1 706 234 57 11 chr17 71056414 71056589 -14381891 - MIR SINE MIR -65 197 15 2341 95 7 0 chr17 71056677 71056972 -14381508 + AluSq SINE Alu 1 297 -16 1288 224 111 35 chr17 71057013 71057367 -14381113 + MLT1C LTR MaLR 11 404 -63 2536 78 0 0 chr17 71057367 71057676 -14380804 - AluY SINE Alu -2 309 1 1288 224 111 35 chr17 71057676 71057746 -14380734 + MLT1C LTR MaLR 404 467 0 388 321 18 0 chr17 71058362 71058471 -14380009 - L2 LINE L2 0 3313 3203 1873 176 68 23 chr17 71058490 71058556 -14379924 - MLT1C LTR MaLR 0 467 405 2268 107 10 0 chr17 71058556 71058855 -14379625 + AluSx SINE Alu 1 302 -10 1873 176 68 23 chr17 71058855 71059230 -14379250 - MLT1C LTR MaLR -62 405 6 1316 161 177 12 chr17 71059483 71059737 -14378743 - AluSc SINE Alu -3 296 1 1987 111 71 24 chr17 71060396 71060693 -14377787 + AluSp SINE Alu 1 311 -2 743 131 0 46 chr17 71060751 71060767 -14377713 - AluJo SINE Alu -1 311 296 2220 118 20 0 chr17 71060767 71061073 -14377407 - AluSq SINE Alu -1 312 1 743 131 0 46 chr17 71061073 71061186 -14377294 - AluJo SINE Alu -16 296 188 3750 138 86 27 chr17 71061186 71062015 -14376465 + pTR5 LTR ERV1 6 277 -437 341 214 31 20 chr17 71062015 71062113 -14376367 + LTR30 LTR ERV1 544 642 -80 2325 101 3 0 chr17 71062113 71062439 -14376041 + pTR5 LTR ERV1 66 392 -2046 1064 210 0 10 chr17 71062439 71062634 -14375846 - AluJo SINE Alu -119 193 1 342 277 24 0 chr17 71062652 71062735 -14375745 + L2 LINE L2 3138 3222 -50 193 245 75 0 chr17 71063828 71063881 -14374599 + MIR SINE MIR 101 157 -105 370 239 23 0 chr17 71063887 71063975 -14374505 - MIR3 SINE MIR -5 203 114 689 225 8 0 chr17 71064125 71064245 -14374235 - FLAM_A SINE Alu -12 121 1 2139 88 3 36 chr17 71064250 71064355 -14374125 - AluSx SINE Alu -17 295 188 2374 106 3 0 chr17 71064355 71064666 -14373814 + AluSp SINE Alu 2 313 0 2139 88 3 36 chr17 71064666 71064865 -14373615 - AluSx SINE Alu -124 188 1 308 309 45 9 chr17 71064900 71065010 -14373470 + L1MC4 LINE L1 7928 8041 -1 406 223 53 0 chr17 71065174 71065268 -14373212 - MER5A DNA MER1_type -87 102 4 22 35 0 0 chr17 71065492 71065521 -14372959 + AT_rich Low_complexity Low_complexity 1 29 0 1587 173 0 0 chr17 71065527 71065764 -14372716 - AluJo SINE Alu -75 237 1 701 205 0 0 chr17 71065827 71065944 -14372536 + FLAM_C SINE Alu 2 118 -25 2389 105 0 3 chr17 71066906 71067211 -14371269 + AluSx SINE Alu 1 304 -8 1744 179 7 7 chr17 71067231 71067522 -14370958 + AluJo SINE Alu 1 291 -21 561 279 219 29 chr17 71068521 71069109 -14369371 - L2 LINE L2 -2 3311 2602 363 279 52 22 chr17 71069117 71069253 -14369227 - MER96 DNA MER1_type? -1 174 35 2360 46 0 0 chr17 71069523 71069785 -14368695 - AluY SINE Alu -15 296 35 1112 234 78 63 chr17 71070250 71070410 -14368070 - L1MC5 LINE L1 -44 7917 7761 1803 159 0 23 chr17 71070410 71070718 -14367762 + AluJo SINE Alu 1 301 -11 1112 234 78 63 chr17 71070718 71071173 -14367307 - L1MC5 LINE L1 -200 7761 7293 2518 82 0 0 chr17 71071251 71071555 -14366925 + AluSx SINE Alu 1 304 -8 1363 165 101 38 chr17 71071698 71072031 -14366449 + MLT1A2 LTR MaLR 4 334 -40 2056 145 30 3 chr17 71072031 71072335 -14366145 - AluSx SINE Alu 0 312 1 1363 165 101 38 chr17 71072335 71072379 -14366101 + MLT1A2 LTR MaLR 334 374 0 378 200 2 51 chr17 71072563 71072653 -14365827 + MIR SINE MIR 72 159 -49 22 43 0 21 chr17 71072871 71072889 -14365591 + AT_rich Low_complexity Low_complexity 1 18 -28 863 146 0 0 chr17 71072889 71073019 -14365461 + FLAM_C SINE Alu 1 130 -3 22 43 0 21 chr17 71073019 71073047 -14365433 + AT_rich Low_complexity Low_complexity 18 46 0 282 287 148 20 chr17 71073565 71073666 -14364814 + L2 LINE L2 3200 3313 0 225 125 18 54 chr17 71073972 71074028 -14364452 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 355 120 0 0 chr17 71074581 71074631 -14363849 - AluJo SINE Alu -17 285 236 513 172 14 131 chr17 71074633 71074677 -14363803 - AluJo SINE Alu -159 153 105 2499 85 3 0 chr17 71074677 71074984 -14363496 + AluSx SINE Alu 1 308 -4 513 172 14 131 chr17 71074984 71075084 -14363396 - AluJo SINE Alu -207 105 26 22 0 0 0 chr17 71075168 71075190 -14363290 + AT_rich Low_complexity Low_complexity 1 22 0 239 296 25 0 chr17 71075567 71075648 -14362832 - MIR SINE MIR -6 256 174 326 239 0 0 chr17 71075699 71075770 -14362710 - Charlie2 DNA MER1_type -2784 78 8 494 286 40 23 chr17 71076923 71077098 -14361382 + MIR SINE MIR 83 260 -2 234 0 0 0 chr17 71077137 71077163 -14361317 + (TTA)n Simple_repeat Simple_repeat 1 26 0 273 258 41 31 chr17 71077239 71077336 -14361144 - MIR SINE MIR -96 166 69 417 290 77 33 chr17 71077625 71077808 -14360672 - MIR SINE MIR -3 259 69 22 0 0 0 chr17 71078418 71078440 -14360040 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr17 71079036 71079071 -14359409 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 71079218 71079247 -14359233 + GC_rich Low_complexity Low_complexity 1 29 0 28 86 0 0 chr17 71079288 71079358 -14359122 + GC_rich Low_complexity Low_complexity 1 70 0 190 298 132 41 chr17 71081004 71081125 -14357355 + L3 LINE CR1 182 313 -1264 527 129 69 20 chr17 71081348 71081449 -14357031 - AluJ SINE Alu -15 297 192 857 161 7 14 chr17 71081449 71081592 -14356888 - AluJ SINE Alu -170 142 1 204 339 69 46 chr17 71081728 71081858 -14356622 - MIR3 SINE MIR -7 201 69 304 233 15 128 chr17 71081962 71082095 -14356385 - MIR3 SINE MIR -3 205 88 2292 93 0 32 chr17 71082356 71082669 -14355811 + AluSg SINE Alu 1 303 -7 310 129 32 0 chr17 71082670 71082732 -14355748 + GA-rich Low_complexity Low_complexity 1 64 0 909 169 0 45 chr17 71083196 71083374 -14355106 + AluJo SINE Alu 1 170 -142 2013 118 15 0 chr17 71083401 71083673 -14354807 + AluSq SINE Alu 26 301 -12 2164 115 3 0 chr17 71083867 71084155 -14354325 + AluSx SINE Alu 16 304 -8 327 231 8 131 chr17 71084215 71084345 -14354135 + MIR3 SINE MIR 89 202 -6 926 126 33 110 chr17 71084548 71084598 -14353882 + AluJo SINE Alu 86 138 -174 2124 103 48 3 chr17 71084598 71084890 -14353590 + AluSg SINE Alu 2 306 -4 926 126 33 110 chr17 71084890 71084965 -14353515 + AluJo SINE Alu 138 195 -117 2186 116 3 3 chr17 71084965 71085266 -14353214 - AluSx SINE Alu -10 302 2 926 126 33 110 chr17 71085266 71085321 -14353159 + AluJo SINE Alu 195 253 -59 223 277 139 50 chr17 71085589 71085690 -14352790 + L2 LINE L2 3204 3313 0 1417 108 29 71 chr17 71086222 71086234 -14352246 - AluSg/x SINE Alu 0 312 301 2047 131 44 0 chr17 71086234 71086531 -14351949 - AluSx SINE Alu -2 310 1 1417 108 29 71 chr17 71086531 71086758 -14351722 - AluSg/x SINE Alu -11 301 83 1607 64 5 20 chr17 71086758 71086960 -14351520 - AluSp SINE Alu -11 302 104 999 94 0 29 chr17 71086981 71087119 -14351361 - AluSp SINE Alu -179 134 1 2545 50 0 3 chr17 71087119 71087417 -14351063 - AluY SINE Alu -14 297 1 577 184 0 0 chr17 71087417 71087504 -14350976 - AluS SINE Alu -220 92 6 1631 169 0 62 chr17 71087522 71087683 -14350797 - AluJo SINE Alu -23 289 154 2164 123 0 19 chr17 71087683 71087993 -14350487 - AluSg SINE Alu -5 305 2 1631 169 0 62 chr17 71087993 71088139 -14350341 - AluJo SINE Alu -158 154 1 5343 32 11 3 chr17 71088149 71088779 -14349701 - L1PA5 LINE L1 -2 6152 5518 3974 130 22 33 chr17 71088779 71089059 -14349421 - L1M2 LINE L1 -691 5606 5325 2211 84 0 28 chr17 71089059 71089369 -14349111 - AluSc SINE Alu 0 302 1 3974 130 22 33 chr17 71089369 71089500 -14348980 - L1M2 LINE L1 -972 5325 5194 1836 186 3 3 chr17 71089500 71089812 -14348668 - AluSx SINE Alu 0 312 1 3974 130 22 33 chr17 71089812 71090444 -14348036 - L1M2 LINE L1 -1103 5194 4558 2476 79 10 0 chr17 71090452 71090756 -14347724 - AluSq SINE Alu -6 307 1 2351 122 0 0 chr17 71091736 71092048 -14346432 + AluSx SINE Alu 1 312 0 886 149 112 0 chr17 71092049 71092212 -14346268 + AluSg/x SINE Alu 129 282 -30 1997 128 21 3 chr17 71092931 71093221 -14345259 + AluSx SINE Alu 1 295 -17 2193 102 3 3 chr17 71093226 71093510 -14344970 + AluSg SINE Alu 1 284 -26 1957 161 0 16 chr17 71093902 71094212 -14344268 + AluJo SINE Alu 1 305 -7 1272 124 0 0 chr17 71094395 71094572 -14343908 + AluSg/x SINE Alu 134 310 -2 2281 94 0 10 chr17 71094659 71094956 -14343524 - AluSg SINE Alu -16 294 1 2383 92 3 0 chr17 71095576 71095879 -14342601 + AluSp SINE Alu 1 304 -9 2111 132 0 0 chr17 71096176 71096472 -14342008 - AluJb SINE Alu -16 296 1 1902 125 7 56 chr17 71097141 71097445 -14341035 + AluJb SINE Alu 7 295 -17 957 122 0 0 chr17 71098420 71098551 -14339929 + AluSq/x SINE Alu 3 133 -180 2306 104 0 0 chr17 71098555 71098852 -14339628 + AluSc SINE Alu 1 297 -12 453 287 63 0 chr17 71099921 71100064 -14338416 - MIR3 SINE MIR -12 196 45 2439 78 0 3 chr17 71100086 71100379 -14338101 - AluSc SINE Alu -14 295 4 2193 120 3 0 chr17 71100683 71100982 -14337498 + AluSq SINE Alu 1 300 -13 216 0 0 0 chr17 71101715 71101739 -14336741 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr17 71102193 71102230 -14336250 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr17 71103809 71103838 -14334642 + AT_rich Low_complexity Low_complexity 1 29 0 2198 114 0 3 chr17 71103838 71104128 -14334352 - AluSq SINE Alu -24 289 1 325 179 0 19 chr17 71104180 71104286 -14334194 + (TA)n Simple_repeat Simple_repeat 1 104 0 1484 165 72 54 chr17 71104652 71104986 -14333494 - MER58B DNA MER1_type 0 341 2 2223 132 0 0 chr17 71105139 71105443 -14333037 - AluSx SINE Alu -7 305 2 2466 96 0 0 chr17 71105471 71105784 -14332696 - AluSq SINE Alu 0 313 1 2231 103 10 0 chr17 71105919 71106209 -14332271 + AluSp SINE Alu 1 293 -20 2323 101 0 19 chr17 71106494 71106810 -14331670 + AluSx SINE Alu 1 310 -2 1476 180 81 0 chr17 71106906 71107178 -14331302 + AluJb SINE Alu 1 294 -18 236 338 113 7 chr17 71107695 71107846 -14330634 + L2 LINE L2 2204 2370 -944 687 247 26 30 chr17 71107847 71108078 -14330402 + L2 LINE L2 2487 2716 -598 2222 77 0 0 chr17 71108192 71108466 -14330014 - AluY SINE Alu -37 274 1 2253 101 6 22 chr17 71108467 71108785 -14329695 - AluSq SINE Alu 0 313 1 641 275 177 12 chr17 71108822 71109011 -14329469 + L2 LINE L2 2925 3082 -231 1681 173 4 0 chr17 71109011 71109283 -14329197 + AluJb SINE Alu 35 307 -5 641 275 177 12 chr17 71109283 71109427 -14329053 + L2 LINE L2 3082 3313 0 1705 163 3 20 chr17 71109863 71110163 -14328317 + AluJb SINE Alu 1 295 -17 215 321 165 9 chr17 71110390 71110499 -14327981 + MIR3 SINE MIR 43 168 -40 1430 185 66 3 chr17 71110832 71111135 -14327345 + MER33 DNA MER1_type 1 322 -2 299 51 0 0 chr17 71112529 71112568 -14325912 + U3 snRNA snRNA 1 39 -178 1107 190 24 0 chr17 71115153 71115358 -14323122 - MER20 DNA MER1_type -5 214 5 318 289 27 40 chr17 71115369 71115518 -14322962 - MER5A DNA MER1_type -36 153 7 1952 126 35 0 chr17 71116611 71116896 -14321584 + AluSx SINE Alu 1 295 -17 1660 162 17 17 chr17 71117832 71117972 -14320508 + AluJo SINE Alu 1 140 -172 189 0 0 0 chr17 71117972 71117993 -14320487 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1660 162 17 17 chr17 71117993 71118149 -14320331 + AluJo SINE Alu 139 297 -15 1255 130 19 60 chr17 71118979 71119194 -14319286 - AluJb SINE Alu -20 292 87 1658 166 75 0 chr17 71120717 71120995 -14317485 + AluJo SINE Alu 1 299 -13 1796 163 40 0 chr17 71121057 71121334 -14317146 + AluJb SINE Alu 1 288 -24 256 226 36 24 chr17 71122592 71122676 -14315804 + (CCGCG)n Simple_repeat Simple_repeat 2 86 0 728 128 7 60 chr17 71123279 71123295 -14315185 - FLAM_C SINE Alu -170 142 127 2409 84 0 3 chr17 71123295 71123603 -14314877 - AluSx SINE Alu -5 307 1 728 128 7 60 chr17 71123603 71123735 -14314745 - FLAM_C SINE Alu -185 127 2 1368 122 0 78 chr17 71124268 71124498 -14313982 - AluSg/x SINE Alu -10 302 91 1003 70 0 16 chr17 71124499 71124628 -14313852 - AluYb8 SINE Alu -187 131 5 1587 160 16 51 chr17 71125102 71125414 -14313066 + AluJo SINE Alu 1 301 -11 949 164 10 130 chr17 71125871 71126069 -14312411 - L1MC4 LINE L1 -2 8040 7887 2160 111 7 0 chr17 71126069 71126358 -14312122 + AluSx SINE Alu 1 291 -21 949 164 10 130 chr17 71126358 71126451 -14312029 - L1MC4 LINE L1 -155 7887 7784 * 1451 223 76 42 chr17 71126450 71126899 -14311581 - L1MC4a LINE L1 -1215 6593 6130 534 261 144 87 chr17 71126949 71127221 -14311259 + L1ME4a LINE L1 5541 5796 -325 2238 113 7 0 chr17 71127221 71127513 -14310967 + AluSx SINE Alu 1 294 -18 534 261 144 87 chr17 71127513 71127593 -14310887 + L1ME4a LINE L1 5796 5870 -251 1896 152 0 26 chr17 71127593 71127902 -14310578 - AluJb SINE Alu -11 301 1 534 261 144 87 chr17 71127902 71127943 -14310537 + L1ME4a LINE L1 5870 5907 -214 1910 107 0 4 chr17 71127943 71128195 -14310285 + AluSx SINE Alu 1 251 -61 534 261 144 87 chr17 71128195 71128348 -14310132 + L1ME4a LINE L1 5907 6120 -1 1830 110 10 70 chr17 71128612 71128944 -14309536 + AluSx SINE Alu 1 314 0 3763 255 142 34 chr17 71128950 71130307 -14308173 - HAL1 LINE L1 -3 2504 916 1995 203 17 3 chr17 71130307 71130667 -14307813 + MLT1A1 LTR MaLR 1 365 0 3763 255 142 34 chr17 71130667 71131052 -14307428 - HAL1 LINE L1 -1591 916 574 195 129 0 0 chr17 71132052 71132083 -14306397 + (TG)n Simple_repeat Simple_repeat 2 32 0 778 183 0 29 chr17 71132309 71132446 -14306034 + FLAM_C SINE Alu 1 133 0 247 244 111 22 chr17 71133748 71133776 -14304704 + HAL1b LINE L1 1191 1215 -133 2179 96 6 29 chr17 71133776 71134089 -14304391 + AluSq SINE Alu 1 306 -7 247 244 111 22 chr17 71134089 71134195 -14304285 + HAL1b LINE L1 1215 1337 -11 256 248 21 35 chr17 71134297 71134438 -14304042 + (CATATA)n Simple_repeat Simple_repeat 6 144 0 2112 119 7 3 chr17 71134528 71134822 -14303658 + AluSq SINE Alu 3 297 -16 222 330 43 11 chr17 71135144 71135320 -14303160 + MIR SINE MIR 10 192 -70 1530 104 5 18 chr17 71135624 71135845 -14302635 - AluSq SINE Alu -15 298 81 1767 149 9 65 chr17 71135854 71136177 -14302303 - AluJo SINE Alu -7 305 1 1421 157 78 0 chr17 71136213 71136455 -14302025 - AluJo SINE Alu -17 295 35 725 163 0 23 chr17 71136474 71136603 -14301877 - FLAM_C SINE Alu -4 129 4 1166 158 0 0 chr17 71136767 71136944 -14301536 + AluJb SINE Alu 134 310 -2 27 0 0 0 chr17 71136944 71136971 -14301509 + AT_rich Low_complexity Low_complexity 1 27 0 2248 116 3 0 chr17 71137119 71137429 -14301051 - AluSq SINE Alu -2 311 1 688 275 36 5 chr17 71137521 71137714 -14300766 + MLT1A2 LTR MaLR 176 374 0 1859 146 30 14 chr17 71137802 71138097 -14300383 - AluSx SINE Alu -12 300 1 1885 178 3 0 chr17 71138143 71138441 -14300039 - AluJb SINE Alu -13 299 1 198 0 0 0 chr17 71138513 71138535 -14299945 + (T)n Simple_repeat Simple_repeat 1 22 0 838 197 22 6 chr17 71138669 71138852 -14299628 - MER53 DNA DNA -3 186 1 1880 127 3 46 chr17 71139287 71139611 -14298869 + AluJb SINE Alu 3 312 0 285 274 75 9 chr17 71140109 71140215 -14298265 + MLT1F LTR MaLR 20 132 -410 2153 112 0 3 chr17 71140282 71140603 -14297877 + AluSq SINE Alu 1 320 0 252 257 220 9 chr17 71140636 71140745 -14297735 + MLT1G LTR MaLR 143 274 -281 372 209 132 23 chr17 71141001 71141130 -14297350 + MLT1G LTR MaLR 440 582 -8 277 244 167 0 chr17 71141902 71141980 -14296500 + L2 LINE L2 3168 3258 -14 181 188 21 42 chr17 71141981 71142029 -14296451 + L2 LINE L2 1375 1421 -1893 343 335 102 0 chr17 71142203 71142379 -14296101 + MIR3 SINE MIR 14 207 -1 1434 163 112 66 chr17 71142646 71142802 -14295678 + MLT1D LTR MaLR 1 148 -357 722 226 0 0 chr17 71142802 71142935 -14295545 - FLAM_A SINE Alu 0 133 1 1434 163 112 66 chr17 71142935 71143232 -14295248 + MLT1D LTR MaLR 148 475 -30 487 318 36 9 chr17 71143307 71143527 -14294953 - MIR SINE MIR -36 226 1 219 382 18 36 chr17 71143712 71143822 -14294658 - MIR SINE MIR -55 153 46 2043 137 40 3 chr17 71144733 71145032 -14293448 + AluSx SINE Alu 1 310 -2 2119 112 3 45 chr17 71145447 71145760 -14292720 - AluSx SINE Alu -12 300 1 1130 178 33 9 chr17 71145900 71146113 -14292367 + AluJo SINE Alu 86 303 -9 370 294 25 25 chr17 71146200 71146319 -14292161 - MIR SINE MIR -124 138 20 2180 105 0 58 chr17 71146416 71146548 -14291932 + AluSx SINE Alu 4 142 -170 1831 53 0 0 chr17 71146548 71146757 -14291723 + AluY SINE Alu 82 290 -21 2180 105 0 58 chr17 71146757 71146949 -14291531 + AluSx SINE Alu 142 309 -3 1348 103 0 0 chr17 71146949 71147123 -14291357 + AluSq SINE Alu 134 307 -6 3511 124 27 23 chr17 71147739 71148264 -14290216 + MER1A DNA MER1_type 1 527 0 400 302 154 30 chr17 71148338 71148702 -14289778 + L2 LINE L2 2254 2662 -652 1070 146 37 0 chr17 71148744 71148908 -14289572 - AluSg/x SINE Alu -9 301 132 2376 80 7 3 chr17 71148908 71149208 -14289272 - AluY SINE Alu -10 301 1 1093 161 4 95 chr17 71149338 71149572 -14288908 + AluJo SINE Alu 85 298 -14 2342 99 0 10 chr17 71149572 71149885 -14288595 + AluSx SINE Alu 1 310 -2 182 328 82 25 chr17 71150001 71150123 -14288357 + L2 LINE L2 3136 3264 -8 * 389 302 12 89 chr17 71150111 71150280 -14288200 - L2 LINE L2 0 3272 3117 347 246 113 7 chr17 71150391 71150533 -14287947 - L1ME4a LINE L1 -2 6119 5963 246 132 0 4 chr17 71150560 71150607 -14287873 - L1MB7 LINE L1 -1 6333 6136 1735 194 0 7 chr17 71150822 71151115 -14287365 + AluJo SINE Alu 1 291 -21 1872 117 88 0 chr17 71151391 71151664 -14286816 + AluSg SINE Alu 1 297 -13 563 297 191 33 chr17 71151670 71152000 -14286480 - L2 LINE L2 -661 2653 2272 928 100 8 23 chr17 71152170 71152300 -14286180 + FLAM_C SINE Alu 7 134 -9 2525 73 0 0 chr17 71152544 71152845 -14285635 + AluY SINE Alu 1 301 -10 2438 76 0 10 chr17 71153605 71153907 -14284573 - AluY SINE Alu -12 299 1 415 193 12 236 chr17 71154102 71154222 -14284258 + MIR SINE MIR 57 92 -170 1761 144 25 18 chr17 71154222 71154507 -14283973 + AluJo SINE Alu 1 287 -25 415 193 12 236 chr17 71154507 71154640 -14283840 + MIR SINE MIR 92 253 -9 808 128 0 40 chr17 71155087 71155212 -14283268 - AluSg/x SINE Alu -20 290 171 440 212 88 53 chr17 71155515 71155574 -14282906 + HAL1 LINE L1 36 91 -2416 1977 143 7 7 chr17 71155574 71155867 -14282613 + AluJb SINE Alu 3 295 -17 440 212 88 53 chr17 71155867 71155977 -14282503 + HAL1 LINE L1 91 211 -2296 2057 260 83 48 chr17 71156111 71157152 -14281328 + HAL1 LINE L1 446 1522 -985 1539 166 49 52 chr17 71157788 71158095 -14280385 + AluJb SINE Alu 1 306 -6 909 182 0 0 chr17 71158108 71158256 -14280224 - FRAM SINE Alu -18 158 11 1960 167 0 3 chr17 71158268 71158567 -14279913 - AluJo SINE Alu -14 298 1 213 211 0 0 chr17 71158629 71158681 -14279799 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 1011 161 0 0 chr17 71158789 71158969 -14279511 + (TA)n Simple_repeat Simple_repeat 1 180 0 1127 145 38 119 chr17 71159007 71159132 -14279348 - L1MB7 LINE L1 -16 6168 6034 2412 89 0 3 chr17 71159132 71159435 -14279045 - AluY SINE Alu -9 302 1 1127 145 38 119 chr17 71159435 71159627 -14278853 - L1MB7 LINE L1 -150 6034 5877 3291 181 33 44 chr17 71159641 71159698 -14278782 - L1MB4 LINE L1 -6 6174 6118 1997 159 0 3 chr17 71159698 71159988 -14278492 - AluJb SINE Alu -21 291 3 3291 181 33 44 chr17 71159988 71160697 -14277783 - L1MB4 LINE L1 -62 6118 5417 23 0 0 0 chr17 71160697 71160720 -14277760 + AT_rich Low_complexity Low_complexity 1 23 0 1900 139 35 0 chr17 71160736 71161023 -14277457 + AluSq SINE Alu 1 297 -16 307 238 168 20 chr17 71161028 71161129 -14277351 - L1MC4 LINE L1 -1339 6703 6588 2281 101 7 0 chr17 71161162 71161458 -14277022 + AluSx SINE Alu 1 298 -14 4264 108 90 78 chr17 71161629 71162981 -14275499 - pTR5 LTR ERV1 0 2438 743 205 282 0 0 chr17 71164516 71164594 -14273886 + CT-rich Low_complexity Low_complexity 3 80 0 210 37 0 0 chr17 71164661 71164688 -14273792 + (CCG)n Simple_repeat Simple_repeat 2 28 0 221 135 19 0 chr17 71164876 71164928 -14273552 + G-rich Low_complexity Low_complexity 4 56 0 1842 175 0 19 chr17 71166190 71166499 -14271981 + AluJo SINE Alu 1 303 -9 263 330 11 11 chr17 71166653 71166747 -14271733 - MER102b DNA MER1_type -18 323 230 1821 123 12 0 chr17 71166749 71167002 -14271478 + AluSx SINE Alu 1 256 -56 459 251 79 55 chr17 71167222 71167535 -14270945 + L1MC5 LINE L1 7500 7827 -134 2193 125 0 3 chr17 71167535 71167830 -14270650 + AluSx SINE Alu 1 294 -18 459 251 79 55 chr17 71167830 71167935 -14270545 + L1MC5 LINE L1 7827 7928 -33 1744 159 37 10 chr17 71167991 71168287 -14270193 - AluJo SINE Alu -8 304 1 25 31 0 0 chr17 71168471 71168503 -14269977 + AT_rich Low_complexity Low_complexity 1 32 0 314 209 0 30 chr17 71168939 71169006 -14269474 - AluJ/monomer SINE Alu -8 293 237 261 239 42 0 chr17 71169008 71169079 -14269401 - MIR SINE MIR -78 130 57 266 248 56 40 chr17 71170118 71170243 -14268237 - MIR3 SINE MIR -15 193 67 946 255 85 22 chr17 71170602 71170920 -14267560 - MER46C DNA MER2_type 0 338 1 239 223 325 5 chr17 71171811 71171932 -14266548 + MIR3 SINE MIR 27 178 -30 210 152 15 30 chr17 71174077 71174143 -14264337 + C-rich Low_complexity Low_complexity 2 66 0 382 244 141 32 chr17 71175278 71175434 -14263046 + MIR SINE MIR 60 232 -30 1296 81 6 0 chr17 71175447 71175608 -14262872 - AluSg/x SINE Alu -6 304 143 314 236 134 39 chr17 71175727 71175854 -14262626 + L1MDa LINE L1 1471 1609 -4931 1381 253 74 23 chr17 71175859 71176442 -14262038 + L1M4 LINE L1 4596 5222 -924 2006 100 15 85 chr17 71176442 71176773 -14261707 + AluSc SINE Alu 1 308 -1 1381 253 74 23 chr17 71176773 71176889 -14261591 + L1M4 LINE L1 5222 5331 -815 3361 158 35 11 chr17 71177167 71177801 -14260679 + L1MA5 LINE L1 5647 6295 -5 1355 103 81 39 chr17 71179902 71180136 -14258344 - THE1B LTR MaLR -120 244 1 1249 91 0 0 chr17 71180395 71180549 -14257931 + AluSx SINE Alu 2 155 -157 2487 77 0 3 chr17 71181032 71181343 -14257137 + AluY SINE Alu 1 310 -1 23 46 6 0 chr17 71181696 71181781 -14256699 + AT_rich Low_complexity Low_complexity 1 44 0 1914 202 13 33 chr17 71182476 71182872 -14255608 + MLT1B LTR MaLR 3 390 0 197 59 59 0 chr17 71183046 71183080 -14255400 + GA-rich Low_complexity Low_complexity 3 38 0 2050 136 13 0 chr17 71183566 71183874 -14254606 - AluSx SINE Alu 0 312 1 635 219 0 0 chr17 71183876 71183999 -14254481 + MLT1A1 LTR MaLR 243 365 0 2576 201 35 18 chr17 71183999 71184571 -14253909 + MER89-int LTR ERV1 6220 6801 0 1057 204 27 6 chr17 71184571 71184871 -14253609 + MER89 LTR ERV1 1 406 -153 346 285 123 16 chr17 71184972 71185225 -14253255 - L1ME4a LINE L1 -11 6110 5831 386 246 157 15 chr17 71185280 71185414 -14253066 + MIR SINE MIR 69 221 -41 240 302 10 42 chr17 71186616 71186712 -14251768 - MIR SINE MIR -11 251 159 535 245 84 0 chr17 71186792 71186935 -14251545 - MIR SINE MIR -88 174 20 229 214 193 14 chr17 71186957 71187102 -14251378 + L1ME3A LINE L1 4280 4450 -1696 401 299 57 13 chr17 71187299 71187456 -14251024 + MIR SINE MIR 91 254 -8 284 79 0 0 chr17 71187679 71187717 -14250763 - Alu SINE Alu -270 38 1 331 206 0 0 chr17 71187724 71187792 -14250688 + L1ME3A LINE L1 5596 5663 -458 2641 58 0 0 chr17 71187908 71188219 -14250261 + AluY SINE Alu 1 311 0 869 278 5 0 chr17 71188477 71188686 -14249794 + MER58A DNA MER1_type 15 224 0 298 164 0 16 chr17 71188687 71188748 -14249732 + L1ME3A LINE L1 5713 5772 -349 1888 138 0 77 chr17 71188801 71189127 -14249353 + AluSx SINE Alu 1 301 -11 567 239 34 62 chr17 71189137 71189313 -14249167 + MER5B DNA MER1_type 2 172 -6 1231 191 0 5 chr17 71189323 71189533 -14248947 + AluSq SINE Alu 1 209 -104 6159 149 201 28 chr17 71189536 71190981 -14247499 - pTR5 LTR ERV1 0 2438 743 614 156 0 0 chr17 71190981 71191077 -14247403 + AluSq SINE Alu 206 301 -12 351 256 17 17 chr17 71191200 71191317 -14247163 + L1ME4a LINE L1 5980 6096 -25 249 254 17 0 chr17 71191588 71191647 -14246833 + MIR SINE MIR 200 259 -3 2269 72 34 10 chr17 71191949 71192240 -14246240 - AluY SINE Alu -13 298 1 271 222 125 0 chr17 71192354 71192426 -14246054 - MIR SINE MIR -114 148 68 236 186 0 0 chr17 71192485 71192528 -14245952 - MER5B DNA MER1_type -135 43 1 262 242 0 16 chr17 71192538 71192600 -14245880 - MER5B DNA MER1_type -1 177 117 2275 102 0 3 chr17 71192602 71192895 -14245585 + AluSq SINE Alu 1 292 -21 765 194 45 17 chr17 71192910 71193110 -14245370 + L1ME3A LINE L1 5968 6170 0 198 0 0 0 chr17 71193309 71193331 -14245149 + (A)n Simple_repeat Simple_repeat 1 22 0 1597 166 0 14 chr17 71193331 71193609 -14244871 + AluJb SINE Alu 1 274 -38 1507 269 52 17 chr17 71193856 71194317 -14244163 + MLT1J LTR MaLR 35 511 0 265 343 19 0 chr17 71194966 71195071 -14243409 + MIR3 SINE MIR 91 197 -11 847 162 7 7 chr17 71195165 71195319 -14243161 - FRAM SINE Alu -22 154 1 406 185 65 11 chr17 71195477 71195569 -14242911 + L1MC5 LINE L1 7079 7175 -786 1974 127 0 10 chr17 71195573 71195887 -14242593 + AluSq SINE Alu 2 312 -1 584 206 33 27 chr17 71195891 71196075 -14242405 + L1MC5 LINE L1 7474 7658 -303 319 327 0 40 chr17 71196171 71196272 -14242208 + MIR SINE MIR 51 147 -61 293 261 149 56 chr17 71197060 71197221 -14241259 + MIR SINE MIR 15 190 -18 1821 114 29 11 chr17 71197264 71197544 -14240936 - AluJo SINE Alu -22 290 6 1843 117 0 4 chr17 71197600 71197865 -14240615 + AluSx SINE Alu 1 264 -48 1013 194 36 137 chr17 71198294 71198492 -14239988 - L1ME2 LINE L1 -9 6155 5939 2099 107 33 0 chr17 71198492 71198792 -14239688 - AluSx SINE Alu -2 310 1 1013 194 36 137 chr17 71198792 71198967 -14239513 - L1ME2 LINE L1 -225 5939 5830 1805 106 0 27 chr17 71198967 71199127 -14239353 - L1MA2 LINE L1 -3 6301 6151 2031 135 3 0 chr17 71199127 71199438 -14239042 - AluSq SINE Alu -1 312 1 1805 106 0 27 chr17 71199438 71199569 -14238911 - L1MA2 LINE L1 -153 6151 6018 1013 194 36 137 chr17 71199569 71199633 -14238847 - L1ME2 LINE L1 -334 5830 5761 335 235 184 46 chr17 71199643 71199728 -14238752 - MER20B DNA MER1_type -114 669 597 1403 187 33 27 chr17 71199728 71200028 -14238452 + AluJo SINE Alu 1 302 -10 335 235 184 46 chr17 71200028 71200159 -14238321 - MER20B DNA MER1_type -186 597 423 355 125 0 36 chr17 71200678 71200734 -14237746 - AluJo SINE Alu -14 288 235 5138 149 46 82 chr17 71200734 71202165 -14236315 + pTR5 LTR ERV1 743 2295 -143 1322 187 0 24 chr17 71202175 71202421 -14236059 - AluJo SINE Alu -72 240 1 328 317 49 16 chr17 71202987 71203110 -14235370 + MIR SINE MIR 117 243 -19 206 286 0 0 chr17 71203080 71203122 -14235358 + L2 LINE L2 3218 3259 -13 * 322 75 0 0 chr17 71203431 71203471 -14235009 - AluSq/x SINE Alu -182 120 81 2087 107 0 3 chr17 71204055 71204346 -14234134 + AluSg SINE Alu 5 294 -16 832 253 116 63 chr17 71204390 71204488 -14233992 + Zaphod DNA AcHobo 1 92 -3939 2026 136 7 0 chr17 71204488 71204798 -14233682 + AluSx SINE Alu 1 312 0 832 253 116 63 chr17 71204798 71205062 -14233418 + Zaphod DNA AcHobo 92 382 -3649 450 185 25 0 chr17 71205066 71205147 -14233333 + Zaphod DNA AcHobo 500 582 -3449 703 109 20 0 chr17 71205147 71205248 -14233232 - MER75 DNA T2_type 0 514 412 232 255 0 0 chr17 71205248 71205295 -14233185 + polypyrimidine Low_complexity Low_complexity 3 49 0 326 71 0 0 chr17 71205295 71205337 -14233143 - MER75 DNA T2_type -54 450 409 224 189 0 0 chr17 71205338 71205375 -14233105 + polypyrimidine Low_complexity Low_complexity 1 37 0 1976 123 0 3 chr17 71205375 71205668 -14232812 - AluSx SINE Alu -20 292 1 3033 108 2 0 chr17 71205669 71206096 -14232384 - MER75 DNA T2_type -85 429 2 703 152 150 78 chr17 71206108 71206174 -14232306 + Zaphod DNA AcHobo 583 643 -3388 2214 71 6 39 chr17 71206174 71206485 -14231995 - AluY SINE Alu -10 301 1 703 152 150 78 chr17 71206485 71206657 -14231823 + Zaphod DNA AcHobo 643 801 -3230 2151 93 7 13 chr17 71206657 71206958 -14231522 - AluSg SINE Alu -10 300 2 703 152 150 78 chr17 71206958 71207092 -14231388 + Zaphod DNA AcHobo 801 983 -3048 2293 77 3 0 chr17 71207099 71207397 -14231083 - AluY SINE Alu -12 299 1 395 159 133 0 chr17 71207414 71207527 -14230953 + Zaphod DNA AcHobo 3626 3753 -278 855 99 0 0 chr17 71207529 71207650 -14230830 + AluSg/x SINE Alu 190 310 0 1029 175 5 5 chr17 71207658 71207852 -14230628 + Zaphod DNA AcHobo 3809 4002 -29 416 205 24 0 chr17 71208503 71208586 -14229894 - MLT1K LTR MaLR -9 579 495 304 162 29 15 chr17 71209404 71209472 -14229008 - MER53 DNA DNA -120 69 1 1756 122 35 0 chr17 71209751 71210006 -14228474 + AluSq SINE Alu 1 264 -49 204 212 0 0 chr17 71210016 71210082 -14228398 + GA-rich Low_complexity Low_complexity 1 66 0 1061 157 0 0 chr17 71210086 71210245 -14228235 + FRAM SINE Alu 1 153 -23 601 188 71 0 chr17 71210304 71210416 -14228064 - FLAM_A SINE Alu -13 120 1 2093 90 17 3 chr17 71210426 71210715 -14227765 - AluSx SINE Alu -19 293 1 1664 171 17 7 chr17 71212672 71212970 -14225510 - AluJo SINE Alu -1 311 11 1601 97 90 76 chr17 71213028 71213317 -14225163 - AluSx SINE Alu -19 293 1 1784 150 27 0 chr17 71213319 71213613 -14224867 - AluSg SINE Alu -8 302 1 411 269 62 25 chr17 71214443 71214603 -14223877 + MIR SINE MIR 97 262 0 1380 167 69 4 chr17 71215521 71215797 -14222683 + AluJo SINE Alu 1 294 -18 279 79 0 0 chr17 71215801 71215839 -14222641 + (GGGGA)n Simple_repeat Simple_repeat 2 39 0 1660 101 147 0 chr17 71216131 71216389 -14222091 + AluSp SINE Alu 2 297 -6 963 96 0 0 chr17 71216391 71216516 -14221964 + AluSg SINE Alu 1 125 -185 392 125 0 0 chr17 71216516 71216572 -14221908 + Tigger3(Golem) DNA MER2_type 2901 2956 -73 26 30 0 0 chr17 71216773 71216806 -14221674 + AT_rich Low_complexity Low_complexity 1 33 0 1981 114 7 0 chr17 71216939 71217248 -14221232 - AluSq SINE Alu 0 311 1 202 97 32 0 chr17 71218013 71218044 -14220436 + G-rich Low_complexity Low_complexity 5 36 0 956 228 47 0 chr17 71221729 71221944 -14216536 + MIR SINE MIR 13 237 -25 330 298 27 58 chr17 71223401 71223436 -14215044 - L1ME4a LINE L1 -1 6120 6085 1745 174 3 3 chr17 71223436 71223747 -14214733 - AluJb SINE Alu -1 311 1 330 298 27 58 chr17 71223747 71223899 -14214581 - L1ME4a LINE L1 -36 6085 5939 585 323 67 4 chr17 71224061 71224330 -14214150 - L1MC4a LINE L1 -1926 5882 5597 32 26 0 0 chr17 71224547 71224586 -14213894 + AT_rich Low_complexity Low_complexity 1 39 0 1031 217 33 0 chr17 71225323 71225535 -14212945 + MER20 DNA MER1_type 1 219 0 234 338 0 12 chr17 71225955 71226035 -14212445 - MIR SINE MIR -89 173 95 957 118 7 13 chr17 71226132 71226284 -14212196 + AluSx SINE Alu 3 153 -159 1841 109 4 0 chr17 71226406 71226662 -14211818 + AluSq SINE Alu 1 257 -56 665 106 0 21 chr17 71226667 71226761 -14211719 - AluS SINE Alu -220 93 2 1973 122 0 0 chr17 71227308 71227586 -14210894 + AluSx SINE Alu 1 278 -34 597 152 0 0 chr17 71227615 71227707 -14210773 - AluS SINE Alu -220 93 2 367 138 0 38 chr17 71227735 71227815 -14210665 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 770 248 91 10 chr17 71227898 71228096 -14210384 + MIR SINE MIR 49 262 0 463 315 75 7 chr17 71228286 71228432 -14210048 - L2 LINE L2 0 3272 3117 2156 112 0 0 chr17 71228634 71228937 -14209543 + AluSx SINE Alu 1 303 -9 1624 147 14 108 chr17 71230112 71230173 -14208307 - L1ME1 LINE L1 -5 6161 6096 2341 63 0 10 chr17 71230173 71230472 -14208008 - AluY SINE Alu -14 297 2 1624 147 14 108 chr17 71230472 71230721 -14207759 - L1ME1 LINE L1 -70 6096 5887 2234 108 7 0 chr17 71230721 71231028 -14207452 - AluSx SINE Alu -3 309 1 1624 147 14 108 chr17 71231028 71231077 -14207403 - L1ME1 LINE L1 -279 5887 5835 1007 196 176 37 chr17 71231077 71231373 -14207107 - MER2 DNA MER2_type -8 337 1 2010 169 55 79 chr17 71231373 71231694 -14206786 - L1ME1 LINE L1 -338 5826 5499 1972 122 26 0 chr17 71231694 71231998 -14206482 - AluSx SINE Alu 0 312 1 1911 123 44 0 chr17 71232005 71232298 -14206182 - AluSx SINE Alu -6 306 1 2010 169 55 79 chr17 71232298 71232556 -14205924 - L1ME1 LINE L1 -671 5493 5230 2168 83 0 35 chr17 71232556 71232869 -14205611 + AluY SINE Alu 1 302 -9 2010 169 55 79 chr17 71232869 71232911 -14205569 - L1ME1 LINE L1 -934 5230 5188 1755 155 10 16 chr17 71232911 71233220 -14205260 + AluJb SINE Alu 6 312 0 2010 169 55 79 chr17 71233220 71233301 -14205179 - L1ME1 LINE L1 -976 5188 5107 1832 156 0 3 chr17 71233301 71233602 -14204878 + AluSx SINE Alu 1 300 -12 2010 169 55 79 chr17 71233602 71233823 -14204657 - L1ME1 LINE L1 -1057 5107 4966 839 161 0 21 chr17 71233823 71233966 -14204514 - FLAM_C SINE Alu 0 143 4 249 98 0 0 chr17 71233984 71234025 -14204455 + (TA)n Simple_repeat Simple_repeat 1 41 0 944 147 6 6 chr17 71234026 71234183 -14204297 + AluJb SINE Alu 134 290 -22 195 42 0 0 chr17 71234183 71234207 -14204273 + (TA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr17 71234892 71234914 -14203566 + GC_rich Low_complexity Low_complexity 1 22 0 1078 238 86 19 chr17 71237440 71237802 -14200678 + L1MC4 LINE L1 7613 7998 -44 1791 149 4 0 chr17 71237900 71238181 -14200299 + AluJb SINE Alu 14 295 -17 660 229 193 0 chr17 71238514 71238732 -14199748 - MIR SINE MIR -1 261 2 1680 201 145 38 chr17 71238903 71239210 -14199270 - L1MC4 LINE L1 -371 7671 7398 1491 173 0 81 chr17 71239210 71239533 -14198947 + AluJb SINE Alu 2 298 -14 1680 201 145 38 chr17 71239533 71239861 -14198619 - L1MC4 LINE L1 -644 7398 6968 26 74 0 0 chr17 71240485 71240539 -14197941 + AT_rich Low_complexity Low_complexity 1 54 0 2041 151 0 10 chr17 71244370 71244674 -14193806 + AluJb SINE Alu 1 301 -11 195 167 0 0 chr17 71244727 71244769 -14193711 + T-rich Low_complexity Low_complexity 1 42 0 762 164 0 0 chr17 71246033 71246149 -14192331 + AluJb SINE Alu 172 287 -25 471 275 65 87 chr17 71246160 71246622 -14191858 - L1ME1 LINE L1 -1529 4617 4166 1028 153 107 37 chr17 71246628 71246843 -14191637 - AluJo SINE Alu -1 311 82 1177 179 155 36 chr17 71247143 71247395 -14191085 + AluJo SINE Alu 1 282 -30 681 179 14 43 chr17 71247403 71247543 -14190937 - MER2 DNA MER2_type -209 136 1 1601 196 52 30 chr17 71247765 71248205 -14190275 + LTR7 LTR ERV1 1 450 0 1800 101 4 0 chr17 71248205 71248442 -14190038 + AluSp SINE Alu 70 307 -6 253 62 0 0 chr17 71248989 71249021 -14189459 - AluSp/q SINE Alu -99 204 173 1952 119 42 0 chr17 71249035 71249321 -14189159 - AluSg SINE Alu -12 298 1 1914 172 61 75 chr17 71249321 71249495 -14188985 - L1M4 LINE L1 -693 5491 5316 1874 171 30 0 chr17 71249495 71249794 -14188686 - AluJb SINE Alu -4 308 1 1914 172 61 75 chr17 71249794 71249853 -14188627 - L1M4 LINE L1 -868 5316 5258 1508 147 0 13 chr17 71249853 71250084 -14188396 - AluJb SINE Alu -1 311 84 1914 172 61 75 chr17 71250084 71250473 -14188007 - L1M4 LINE L1 -926 5258 4848 * 3227 230 53 35 chr17 71250469 71250889 -14187591 - L1ME3 LINE L1 -8 6154 5743 2085 129 0 0 chr17 71250889 71251176 -14187304 - AluSg SINE Alu -23 287 1 3227 230 53 35 chr17 71251176 71251306 -14187174 - L1ME3 LINE L1 -419 5743 5617 2247 100 0 0 chr17 71251306 71251597 -14186883 - AluY SINE Alu -19 292 2 3227 230 53 35 chr17 71251597 71252281 -14186199 - L1ME3 LINE L1 -545 5617 4903 2388 91 0 16 chr17 71252993 71253300 -14185180 - AluSc SINE Alu -7 302 1 899 200 0 24 chr17 71253304 71253469 -14185011 + FRAM SINE Alu 1 153 -23 10663 59 14 30 chr17 71253660 71255043 -14183437 + SVA Other Other 25 1385 -1 2075 123 10 16 chr17 71255319 71255628 -14182852 + AluJb SINE Alu 1 307 -5 1450 174 59 38 chr17 71256346 71256633 -14181847 + AluJo SINE Alu 1 293 -19 2183 105 0 3 chr17 71256635 71256921 -14181559 + AluSc SINE Alu 1 285 -24 237 192 19 0 chr17 71256921 71256973 -14181507 + (TA)n Simple_repeat Simple_repeat 2 54 0 1596 167 26 39 chr17 71257057 71257363 -14181117 + AluJo SINE Alu 1 302 -10 1510 232 41 67 chr17 71257773 71257925 -14180555 + L1M4 LINE L1 4713 4867 -1279 2140 104 31 0 chr17 71257925 71258214 -14180266 - AluSx SINE Alu -14 298 1 1510 232 41 67 chr17 71258214 71258454 -14180026 + L1M4 LINE L1 4867 5088 -1058 2212 99 0 32 chr17 71258454 71258768 -14179712 + AluSq SINE Alu 1 304 -9 1510 232 41 67 chr17 71258768 71258957 -14179523 + L1M4 LINE L1 5088 5280 -866 866 159 0 0 chr17 71311961 71312093 -14126387 + FLAM_C SINE Alu 2 133 0 350 290 11 0 chr17 71312152 71312245 -14126235 + MIR SINE MIR 136 229 -33 1989 135 19 3 chr17 71313391 71313703 -14124777 + L1PA15 LINE L1 5828 6144 -21 21 57 0 0 chr17 71314527 71314562 -14123918 + AT_rich Low_complexity Low_complexity 1 35 0 769 267 57 5 chr17 71316277 71316487 -14121993 - MER58A DNA MER1_type 0 224 4 24 32 0 0 chr17 71318596 71318627 -14119853 + AT_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr17 71318980 71319013 -14119467 + AT_rich Low_complexity Low_complexity 1 33 0 204 158 0 0 chr17 71320503 71320541 -14117939 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1508 175 42 11 chr17 71320546 71320809 -14117671 - AluSx SINE Alu -38 274 4 2740 193 60 41 chr17 71321127 71321740 -14116740 - MER82 DNA MER2_type -2 651 27 773 168 36 0 chr17 71322456 71322593 -14115887 - FLAM_C SINE Alu -1 142 1 1312 181 143 38 chr17 71325664 71325979 -14112501 - MER7A DNA MER2_type 0 346 1 302 213 53 0 chr17 71328293 71328368 -14110112 - L2 LINE L2 0 3313 3235 301 291 78 100 chr17 71328370 71328600 -14109880 + L2 LINE L2 3047 3271 -1 337 263 200 19 chr17 71329869 71330029 -14108451 - MER5A DNA MER1_type 0 189 1 13238 110 34 40 chr17 71332095 71332675 -14105805 - Tigger1 DNA MER2_type -1 2417 1835 2467 88 0 0 chr17 71332675 71332981 -14105499 + AluY SINE Alu 1 306 -5 13238 110 34 40 chr17 71332981 71333334 -14105146 - Tigger1 DNA MER2_type -583 1835 1481 2505 63 0 0 chr17 71333334 71333636 -14104844 + AluY SINE Alu 1 302 -9 13238 110 34 40 chr17 71333636 71334064 -14104416 - Tigger1 DNA MER2_type -937 1481 1052 610 28 0 0 chr17 71334064 71334136 -14104344 - L1PA5 LINE L1 -6 6148 6077 13238 110 34 40 chr17 71334136 71334895 -14103585 - Tigger1 DNA MER2_type -1366 1052 309 949 121 8 0 chr17 71334899 71335031 -14103449 + AluSq/x SINE Alu 1 133 -180 2239 102 3 3 chr17 71335034 71335327 -14103153 + AluSx SINE Alu 1 293 -19 1256 122 6 6 chr17 71335327 71335508 -14102972 - Tigger1 DNA MER2_type -2237 181 1 2625 53 0 0 chr17 71335512 71335816 -14102664 - AluY SINE Alu -7 304 1 2173 118 3 0 chr17 71335997 71336294 -14102186 + AluSq SINE Alu 1 298 -15 2306 116 0 0 chr17 71337155 71337466 -14101014 - AluSx SINE Alu 0 312 2 330 265 212 0 chr17 71337485 71337617 -14100863 + MER5B DNA MER1_type 1 160 -18 391 286 58 7 chr17 71338236 71338390 -14100090 + MIR SINE MIR 13 174 -88 306 0 0 0 chr17 71338475 71338509 -14099971 + (TTA)n Simple_repeat Simple_repeat 1 34 0 658 106 0 11 chr17 71338944 71339038 -14099442 + FLAM_C SINE Alu 36 128 -15 290 239 15 0 chr17 71339278 71339345 -14099135 + MER96 DNA MER1_type? 108 175 0 2989 9 0 0 chr17 71339452 71339770 -14098710 - AluYb8 SINE Alu 0 318 1 1795 129 40 91 chr17 71339794 71340189 -14098291 + THE1C LTR MaLR 1 375 0 414 197 262 16 chr17 71340401 71340523 -14097957 + MER5B DNA MER1_type 2 153 -25 714 220 0 0 chr17 71340525 71340702 -14097778 + (TA)n Simple_repeat Simple_repeat 2 178 0 216 176 0 0 chr17 71340703 71340737 -14097743 + (CATA)n Simple_repeat Simple_repeat 4 37 0 302 318 0 0 chr17 71340737 71340825 -14097655 + L1MC4 LINE L1 6616 6703 -1339 * 303 322 0 0 chr17 71340805 71340895 -14097585 - L1MC4 LINE L1 -1339 6703 6614 1577 117 125 8 chr17 71340904 71341160 -14097320 - AluSx SINE Alu -26 286 1 302 232 254 14 chr17 71341193 71341335 -14097145 - MER5A DNA MER1_type -3 186 11 573 235 85 0 chr17 71341882 71342035 -14096445 + MIR SINE MIR 12 177 -85 289 326 30 44 chr17 71342589 71342724 -14095756 - L2 LINE L2 -1 3312 3180 1941 104 15 4 chr17 71343714 71343973 -14094507 + AluSx SINE Alu 35 296 -16 2109 187 6 3 chr17 71344064 71344428 -14094052 + MLT1A1 LTR MaLR 1 365 0 287 371 29 7 chr17 71344457 71344597 -14093883 - L3 LINE CR1 -483 1094 952 1173 224 168 57 chr17 71344620 71345079 -14093401 + MLT1E2 LTR MaLR 1 510 -116 2373 117 57 21 chr17 71345094 71345478 -14093002 + MSTB LTR MaLR 2 399 -27 292 103 35 17 chr17 71345479 71345537 -14092943 + CT-rich Low_complexity Low_complexity 2 60 0 2134 114 4 0 chr17 71345537 71345817 -14092663 - AluSq SINE Alu -32 281 1 237 105 26 0 chr17 71345817 71345855 -14092625 + MSTB LTR MaLR 388 426 0 * 394 174 144 12 chr17 71345855 71345948 -14092532 + MLT1E3 LTR MaLR 401 623 -1 351 222 33 22 chr17 71346067 71346157 -14092323 + LTR45 LTR ERV1 435 525 0 353 275 12 36 chr17 71346529 71346696 -14091784 - L1MC4a LINE L1 -1862 5946 5784 1151 104 0 0 chr17 71346712 71346866 -14091614 + MLT1A1 LTR MaLR 1 154 -211 814 50 20 0 chr17 71346866 71346966 -14091514 - AluSc SINE Alu -182 127 26 1246 97 0 0 chr17 71346966 71347120 -14091360 + AluSc SINE Alu 143 296 -13 1157 210 28 9 chr17 71347120 71347334 -14091146 + MLT1A1 LTR MaLR 148 365 0 1209 277 67 46 chr17 71347348 71348289 -14090191 - L1MC4a LINE L1 -514 5650 4765 180 0 0 0 chr17 71348351 71348371 -14090109 + (T)n Simple_repeat Simple_repeat 1 20 0 400 274 65 61 chr17 71348506 71348561 -14089919 + L1ME LINE L1 5531 5584 -537 2232 109 0 3 chr17 71348561 71348884 -14089596 - AluSx SINE Alu 0 322 1 400 274 65 61 chr17 71348884 71349056 -14089424 + L1ME LINE L1 5584 5761 -360 578 272 137 50 chr17 71349497 71349839 -14088641 + MLT1K LTR MaLR 183 554 -34 2489 82 0 0 chr17 71349864 71350167 -14088313 + AluSq SINE Alu 1 303 -10 213 281 73 10 chr17 71350978 71351074 -14087406 + MIR SINE MIR 97 198 -64 2377 112 0 0 chr17 71352146 71352458 -14086022 - AluSx SINE Alu 0 312 1 955 216 0 60 chr17 71353911 71354129 -14084351 - MER58A DNA MER1_type -19 205 1 230 258 32 0 chr17 71354135 71354197 -14084283 + L2 LINE L2 2325 2388 -926 599 265 121 29 chr17 71354232 71354460 -14084020 - LTR16A1 LTR ERVL 0 457 199 1882 135 52 22 chr17 71354460 71354824 -14083656 + THE1C LTR MaLR 1 375 0 599 265 121 29 chr17 71354824 71354867 -14083613 - LTR16A1 LTR ERVL -258 199 161 1165 241 127 51 chr17 71354886 71354952 -14083528 - MLT1D LTR MaLR 0 505 445 2458 65 3 13 chr17 71354952 71355285 -14083195 + AluY SINE Alu 1 311 0 1165 241 127 51 chr17 71355285 71355667 -14082813 - MLT1D LTR MaLR -60 445 23 316 323 109 31 chr17 71355959 71356253 -14082227 + L2 LINE L2 2442 2758 -556 898 179 79 16 chr17 71356284 71356474 -14082006 - MER3 DNA MER1_type 0 209 8 247 233 0 155 chr17 71356762 71356853 -14081627 + L2 LINE L2 3164 3231 -41 2114 123 7 0 chr17 71356853 71357138 -14081342 - AluSx SINE Alu -25 287 1 247 233 0 155 chr17 71357138 71357175 -14081305 + L2 LINE L2 3231 3272 0 780 168 28 0 chr17 71358516 71358659 -14079821 - MER69 DNA AcHobo 0 2526 2380 278 177 32 0 chr17 71358696 71358758 -14079722 + L1MC4 LINE L1 6640 6703 -1339 347 0 23 0 chr17 71358758 71358801 -14079679 + (TA)n Simple_repeat Simple_repeat 2 45 0 968 172 0 39 chr17 71358801 71358981 -14079499 - AluJb SINE Alu -139 173 1 302 148 19 0 chr17 71359052 71359106 -14079374 - MER69 DNA AcHobo -2471 55 1 207 0 0 0 chr17 71359494 71359517 -14078963 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 742 185 41 3 chr17 71359916 71360091 -14078389 + MIR SINE MIR 19 196 -62 741 132 17 29 chr17 71360180 71360418 -14078062 + CT-rich Low_complexity Low_complexity 1 234 0 2017 120 32 26 chr17 71360420 71360729 -14077751 - AluSq SINE Alu -2 311 1 2446 144 3 22 chr17 71360731 71360823 -14077657 - MSTC LTR MaLR -67 361 269 1603 139 4 4 chr17 71360823 71361061 -14077419 - AluJo SINE Alu -19 293 56 2446 144 3 22 chr17 71361061 71361336 -14077144 - MSTC LTR MaLR -159 269 1 1435 238 56 44 chr17 71361515 71362012 -14076468 + MLT1D LTR MaLR 1 467 0 641 174 0 0 chr17 71362017 71362115 -14076365 + AluS SINE Alu 2 99 -214 27 0 0 0 chr17 71362134 71362161 -14076319 + AT_rich Low_complexity Low_complexity 1 27 0 376 50 118 6 chr17 71362171 71362332 -14076148 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 387 103 72 16 chr17 71362292 71362543 -14075937 + (TTATA)n Simple_repeat Simple_repeat 1 265 0 405 0 0 0 chr17 71362543 71362588 -14075892 + (CA)n Simple_repeat Simple_repeat 2 46 0 539 259 81 30 chr17 71362968 71363204 -14075276 - MIR SINE MIR 0 262 15 969 172 141 0 chr17 71364179 71364371 -14074109 + MER20 DNA MER1_type 1 219 0 22 0 0 0 chr17 71364732 71364754 -14073726 + AT_rich Low_complexity Low_complexity 1 22 0 227 31 31 0 chr17 71364754 71364786 -14073694 + (CA)n Simple_repeat Simple_repeat 1 33 0 2269 78 0 78 chr17 71365467 71365787 -14072693 + AluSc SINE Alu 1 295 -14 721 291 36 33 chr17 71366328 71366658 -14071822 - MLT1I LTR MaLR -6 403 73 451 274 25 30 chr17 71367500 71367701 -14070779 - MIR SINE MIR -5 257 58 297 247 24 12 chr17 71367834 71367919 -14070561 - L1ME LINE L1 -515 5606 5521 1135 32 0 53 chr17 71368108 71368297 -14070183 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2256 102 7 3 chr17 71368327 71368630 -14069850 - AluSc SINE Alu -5 304 1 384 278 73 0 chr17 71368642 71368793 -14069687 + MIR SINE MIR 90 251 -11 275 293 74 79 chr17 71369376 71369537 -14068943 - MIR SINE MIR -36 226 65 2158 76 0 57 chr17 71369537 71369838 -14068642 - AluSg SINE Alu -1 309 26 275 293 74 79 chr17 71369838 71369891 -14068589 - MIR SINE MIR -197 65 13 * 291 303 13 0 chr17 71369887 71369963 -14068517 - L2 LINE L2 -3 3310 3234 1266 225 116 59 chr17 71369987 71370392 -14068088 - MLT1D LTR MaLR -2 503 66 1806 97 116 0 chr17 71370392 71370651 -14067829 + AluY SINE Alu 1 289 -22 1266 225 116 59 chr17 71370651 71370721 -14067759 - MLT1D LTR MaLR -439 66 1 2153 121 0 7 chr17 71370792 71371127 -14067353 + AluSx SINE Alu 1 312 0 336 57 0 38 chr17 71372234 71372287 -14066193 - L1PA6 LINE L1 0 6154 6104 1209 186 193 94 chr17 71373128 71373574 -14064906 + MLT1D LTR MaLR 16 505 0 1990 139 3 23 chr17 71373647 71373956 -14064524 - AluSx SINE Alu -9 303 1 2320 137 21 16 chr17 71375205 71375593 -14062887 - MLT1B LTR MaLR 0 390 1 1660 235 40 29 chr17 71375780 71376201 -14062279 + MLT1H LTR MaLR 117 542 -7 193 333 39 20 chr17 71377041 71377143 -14061337 - MIR3 SINE MIR -22 186 83 2259 51 29 4 chr17 71377851 71378151 -14060329 - AluY SINE Alu 0 307 1 316 248 16 64 chr17 71378167 71378292 -14060188 + MLT1K LTR MaLR 467 585 -3 2761 125 5 23 chr17 71378331 71378764 -14059716 + MER61B LTR ERV1 1 425 0 631 221 66 7 chr17 71380231 71380367 -14058113 - MER92C LTR ERV1 -33 521 378 559 237 105 68 chr17 71380739 71380881 -14057599 + MIR SINE MIR 12 147 -115 2544 17 42 0 chr17 71380881 71381168 -14057312 + AluY SINE Alu 1 299 -12 2505 200 50 42 chr17 71381174 71381793 -14056687 - MLT1E3 LTR MaLR 0 624 1 559 237 105 68 chr17 71381793 71381862 -14056618 + MIR SINE MIR 151 238 -24 189 0 0 0 chr17 71382953 71382974 -14055506 + (CA)n Simple_repeat Simple_repeat 1 21 0 2131 136 0 0 chr17 71384142 71384436 -14054044 - AluSx SINE Alu -18 294 1 1718 176 17 13 chr17 71384755 71385056 -14053424 - AluJb SINE Alu -10 302 1 34 89 0 0 chr17 71387748 71387838 -14050642 + GC_rich Low_complexity Low_complexity 1 90 0 224 105 26 0 chr17 71388469 71388507 -14049973 + L2 LINE L2 3214 3252 -20 343 213 13 0 chr17 71389085 71389160 -14049320 + MIR SINE MIR 121 196 -66 1618 137 113 3 chr17 71389179 71389463 -14049017 - MER7A DNA MER2_type -32 314 2 267 267 94 63 chr17 71390419 71390610 -14047870 + L2 LINE L2 2560 2756 -558 8348 50 9 0 chr17 71390746 71391703 -14046777 - LTR5 LTR ERVK -3 966 1 2705 165 11 11 chr17 71391924 71392391 -14046089 + MLT1C LTR MaLR 1 467 0 1692 161 3 33 chr17 71393283 71393587 -14044893 - AluJo SINE Alu -17 295 1 420 236 101 73 chr17 71393930 71394108 -14044372 + MER5A DNA MER1_type 7 189 0 329 299 10 0 chr17 71394370 71394467 -14044013 + MIR3 SINE MIR 90 187 -21 384 331 0 8 chr17 71394583 71394710 -14043770 + MIR3 SINE MIR 15 140 -68 1994 251 53 31 chr17 71394734 71396091 -14042389 + L1MDa LINE L1 1880 3283 -3257 1985 240 20 11 chr17 71396065 71396602 -14041878 + L1ME1 LINE L1 5991 6532 -28 * 204 40 0 0 chr17 71396622 71396647 -14041833 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 327 307 80 7 chr17 71396666 71396803 -14041677 + L1ME LINE L1 5684 5830 -332 216 0 0 0 chr17 71396860 71396884 -14041596 + (TG)n Simple_repeat Simple_repeat 2 25 0 1668 176 41 10 chr17 71396928 71397223 -14041257 + AluJo SINE Alu 1 304 -8 1551 187 41 39 chr17 71397263 71397539 -14040941 - MLT1A1 LTR MaLR 0 365 86 2779 116 21 19 chr17 71397539 71397970 -14040510 + MSTB1 LTR MaLR 1 432 0 1551 187 41 39 chr17 71397970 71398057 -14040423 - MLT1A1 LTR MaLR -279 86 1 319 274 156 67 chr17 71400158 71400337 -14038143 + L1ME4a LINE L1 5392 5586 -535 385 169 32 10 chr17 71400353 71400447 -14038033 - LTR50 LTR ERVL 0 795 687 658 240 8 12 chr17 71400852 71401025 -14037455 - LTR41 LTR ERVL -610 185 1 347 327 128 0 chr17 71401027 71401183 -14037297 + L1ME4a LINE L1 5616 5791 -330 2107 125 0 29 chr17 71401338 71401650 -14036830 - AluY SINE Alu -8 303 1 202 272 86 25 chr17 71401650 71401726 -14036754 + L2 LINE L2 3228 3308 -5 303 314 29 0 chr17 71401726 71401828 -14036652 - MLT1D LTR MaLR 0 467 363 * 387 201 45 60 chr17 71401824 71401958 -14036522 - MLT1D LTR MaLR -326 179 48 358 215 67 44 chr17 71402026 71402161 -14036319 + L1ME4a LINE L1 5984 6121 0 243 0 0 0 chr17 71402797 71402824 -14035656 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 27 29 0 0 chr17 71402934 71402968 -14035512 + AT_rich Low_complexity Low_complexity 1 34 0 1132 222 5 0 chr17 71403133 71403354 -14035126 - MER58A DNA MER1_type 0 224 3 205 324 77 47 chr17 71404527 71404697 -14033783 + L2 LINE L2 2035 2209 -1105 897 205 36 112 chr17 71404794 71405150 -14033330 - MLT1J LTR MaLR -88 423 95 471 352 143 16 chr17 71405240 71405785 -14032695 + L2 LINE L2 2230 2843 -471 397 322 47 34 chr17 71406358 71406591 -14031889 - MLT1L LTR MaLR -225 390 155 2437 88 68 3 chr17 71407028 71407380 -14031100 + THE1C LTR MaLR 1 375 0 2256 123 10 0 chr17 71408728 71409037 -14029443 + AluSx SINE Alu 1 312 0 216 0 0 0 chr17 71409511 71409535 -14028945 + (T)n Simple_repeat Simple_repeat 1 24 0 263 330 50 0 chr17 71409576 71409676 -14028804 - L2 LINE L2 -12 3301 3197 270 0 0 0 chr17 71410139 71410169 -14028311 + (TG)n Simple_repeat Simple_repeat 1 30 0 228 67 0 0 chr17 71410169 71410199 -14028281 + (GA)n Simple_repeat Simple_repeat 2 31 0 2203 231 27 13 chr17 71410335 71410886 -14027594 - MER119 DNA MER1_type 0 583 25 207 229 38 19 chr17 71411103 71411208 -14027272 + (TA)n Simple_repeat Simple_repeat 1 107 0 368 130 14 0 chr17 71411210 71411279 -14027201 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 232 418 52 0 chr17 71411379 71411532 -14026948 - L2 LINE L2 -2090 1224 1064 1484 284 69 18 chr17 71411928 71412492 -14025988 + MLT1E LTR MaLR 1 593 0 319 178 47 149 chr17 71412508 71412691 -14025789 - MER104 DNA Tc2 -17 163 1 1964 144 3 10 chr17 71412730 71413036 -14025444 - AluJb SINE Alu -8 304 1 1131 53 0 0 chr17 71413113 71413245 -14025235 - AluY SINE Alu -179 132 1 316 315 0 8 chr17 71413363 71413490 -14024990 - L1MC4a LINE L1 -1862 5946 5821 2318 100 0 0 chr17 71413559 71413849 -14024631 - AluSg SINE Alu -20 290 1 411 98 0 0 chr17 71413980 71414041 -14024439 + (TG)n Simple_repeat Simple_repeat 2 62 0 258 163 0 0 chr17 71414305 71414354 -14024126 - HAL1 LINE L1 -1487 1020 972 255 119 0 0 chr17 71414362 71414404 -14024076 - HAL1 LINE L1 -1490 1017 976 332 224 10 0 chr17 71414431 71414529 -14023951 + CT-rich Low_complexity Low_complexity 1 99 0 387 309 71 71 chr17 71414977 71415343 -14023137 - HAL1 LINE L1 -2067 440 75 688 248 130 0 chr17 71415343 71415559 -14022921 + MIR SINE MIR 17 261 -1 1526 102 8 38 chr17 71415649 71415884 -14022596 - MER30 DNA MER1_type -2 228 1 328 352 21 7 chr17 71415906 71416051 -14022429 + L2 LINE L2 3167 3313 0 935 308 16 4 chr17 71416086 71416339 -14022141 + MIR SINE MIR 1 256 -6 1823 163 0 16 chr17 71416477 71416783 -14021697 - AluJb SINE Alu -11 301 1 700 258 97 18 chr17 71416815 71417032 -14021448 + MIR SINE MIR 28 261 -1 265 411 6 0 chr17 71417032 71417195 -14021285 + (ATG)n Simple_repeat Simple_repeat 3 166 0 330 351 33 10 chr17 71417215 71417394 -14021086 + MIR SINE MIR 13 201 -61 317 151 233 0 chr17 71417403 71417476 -14021004 + HsTC2 DNA Tc2 19 108 -1790 508 125 0 0 chr17 71417494 71417574 -14020906 - L1MA1 LINE L1 0 6302 6223 528 219 79 33 chr17 71417589 71417804 -14020676 + HsTC2 DNA Tc2 1669 1893 -5 1196 244 62 43 chr17 71417912 71418075 -14020405 + MLT1F LTR MaLR 1 159 -383 2157 88 37 0 chr17 71418075 71418369 -14020111 - AluSp SINE Alu -8 305 1 1196 244 62 43 chr17 71418369 71418628 -14019852 + MLT1F LTR MaLR 159 431 -111 502 122 11 0 chr17 71418636 71418726 -14019754 + L1MA4A LINE L1 6208 6298 -5 2266 105 13 10 chr17 71418849 71419154 -14019326 + AluSg SINE Alu 1 306 -4 297 0 0 0 chr17 71419240 71419273 -14019207 + (TG)n Simple_repeat Simple_repeat 2 34 0 567 294 8 42 chr17 71419673 71419832 -14018648 - HAL1 LINE L1 -10 2497 2349 2292 91 10 0 chr17 71419832 71420128 -14018352 - AluSq SINE Alu -14 299 1 567 294 8 42 chr17 71420128 71420230 -14018250 - HAL1 LINE L1 -158 2349 2245 436 314 26 67 chr17 71420230 71420259 -14018221 - LTR16C LTR ERVL 0 491 462 891 162 27 11 chr17 71420259 71420444 -14018036 - MER53 DNA DNA 0 189 2 436 314 26 67 chr17 71420444 71420479 -14018001 - LTR16C LTR ERVL -29 462 427 1915 133 67 56 chr17 71420479 71420763 -14017717 + THE1B LTR MaLR 1 291 -73 2045 132 0 3 chr17 71420763 71421059 -14017421 - AluSq SINE Alu -14 299 5 1915 133 67 56 chr17 71421059 71421134 -14017346 + THE1B LTR MaLR 291 364 0 436 314 26 67 chr17 71421134 71421380 -14017100 - LTR16C LTR ERVL -64 427 193 794 302 79 18 chr17 71421448 71421902 -14016578 - HAL1 LINE L1 -337 2170 1689 2054 92 12 129 chr17 71421902 71422327 -14016153 + THE1C LTR MaLR 1 375 0 1179 241 86 125 chr17 71422327 71423485 -14014995 - HAL1 LINE L1 -814 1693 581 1209 179 125 4 chr17 71423523 71423763 -14014717 - AluJb SINE Alu -43 269 1 282 321 43 6 chr17 71423801 71423963 -14014517 - L1ME LINE L1 -268 5853 5684 23 33 0 0 chr17 71424312 71424342 -14014138 + AT_rich Low_complexity Low_complexity 1 30 0 2076 124 47 44 chr17 71424648 71425011 -14013469 - THE1B LTR MaLR 0 364 1 2197 108 0 0 chr17 71425062 71425349 -14013131 - AluSx SINE Alu -8 304 18 311 250 117 48 chr17 71425349 71425500 -14012980 - L1MC/D LINE L1 -2014 5794 5626 4395 70 0 0 chr17 71425500 71426053 -14012427 + MER41A LTR ERV1 1 553 -1 311 250 117 48 chr17 71426053 71426089 -14012391 - L1MC/D LINE L1 -2182 5626 5594 220 98 37 61 chr17 71426151 71426233 -14012247 + (TTAAA)n Simple_repeat Simple_repeat 3 82 0 310 87 0 0 chr17 71426243 71426289 -14012191 - MER106B DNA MER1_type -908 151 106 210 317 49 0 chr17 71427070 71427152 -14011328 + MIR SINE MIR 41 126 -82 776 239 61 80 chr17 71427726 71427841 -14010639 - MIR SINE MIR -2 260 144 2354 112 0 0 chr17 71427841 71428144 -14010336 - AluSx SINE Alu -9 303 1 776 239 61 80 chr17 71428144 71428291 -14010189 - MIR SINE MIR -118 144 3 408 261 183 13 chr17 71428386 71428539 -14009941 - MER5A DNA MER1_type -1 188 10 476 289 84 42 chr17 71430222 71430461 -14008019 + MIR SINE MIR 13 261 -1 267 287 74 41 chr17 71431636 71431974 -14006506 + L1ME3 LINE L1 1864 2212 -4184 1955 176 10 23 chr17 71432013 71432399 -14006081 + MLT1B LTR MaLR 10 390 0 712 309 109 9 chr17 71432409 71433044 -14005436 + L1ME3 LINE L1 2199 2896 -3319 * 1528 218 51 34 chr17 71433042 71433640 -14004840 + L1ME1 LINE L1 4905 5526 -652 601 141 0 0 chr17 71433641 71433733 -14004747 + AluS SINE Alu 1 92 -220 810 123 31 8 chr17 71433738 71433868 -14004612 + AluSx SINE Alu 58 190 -122 3088 124 4 32 chr17 71433943 71434444 -14004036 - LTR22B LTR ERVK -4 488 2 1000 86 0 0 chr17 71434446 71434574 -14003906 + AluSp/q SINE Alu 178 305 -8 1621 235 87 23 chr17 71434624 71435190 -14003290 + L1ME1 LINE L1 5547 6148 -18 665 296 73 19 chr17 71435235 71435425 -14003055 + L1ME3 LINE L1 2931 3109 -3106 1838 152 61 25 chr17 71435425 71435787 -14002693 + THE1C LTR MaLR 1 375 0 665 296 73 19 chr17 71435787 71436063 -14002417 + L1ME3 LINE L1 3109 3422 -2793 618 271 77 19 chr17 71436069 71436171 -14002309 + L1ME3 LINE L1 3318 3413 -2802 1486 176 44 93 chr17 71436171 71436400 -14002080 + MLT1B LTR MaLR 1 203 -187 2308 122 0 0 chr17 71436400 71436704 -14001776 + AluSx SINE Alu 1 304 -8 1486 176 44 93 chr17 71436704 71436884 -14001596 + MLT1B LTR MaLR 203 390 0 618 271 77 19 chr17 71436884 71437147 -14001333 + L1ME3 LINE L1 3413 3704 -2511 1680 254 52 25 chr17 71437172 71437734 -14000746 + L1ME3 LINE L1 5332 5916 -323 1773 173 10 10 chr17 71437734 71438023 -14000457 + AluJo SINE Alu 1 289 -23 1680 254 52 25 chr17 71438023 71438110 -14000370 + L1ME3 LINE L1 5916 5999 -240 350 276 59 53 chr17 71438171 71438323 -14000157 + L1ME3 LINE L1 6002 6154 -77 440 200 9 0 chr17 71438488 71438598 -13999882 + (TCCA)n Simple_repeat Simple_repeat 4 114 0 2104 149 33 0 chr17 71438946 71439281 -13999199 + MER7A DNA MER2_type 1 344 -2 428 302 41 35 chr17 71439285 71439600 -13998880 + L1ME4a LINE L1 5603 5919 -202 26 30 0 0 chr17 71439869 71439902 -13998578 + AT_rich Low_complexity Low_complexity 1 33 0 369 252 36 18 chr17 71440155 71440266 -13998214 + MIR SINE MIR 85 197 -65 5419 30 3 0 chr17 71440315 71441004 -13997476 - L1PA3 LINE L1 -2131 4015 3325 11846 24 1 0 chr17 71441004 71443182 -13995298 + L1PA3 LINE L1 3998 6176 0 210 37 0 0 chr17 71444624 71444651 -13993829 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 342 201 15 0 chr17 71444716 71444791 -13993689 - MIR SINE MIR -61 147 79 22 56 0 0 chr17 71445293 71445329 -13993151 + AT_rich Low_complexity Low_complexity 1 36 0 307 289 128 21 chr17 71445497 71445684 -13992796 - L1ME4a LINE L1 -65 6056 5850 291 269 14 113 chr17 71446240 71446347 -13992133 - L2 LINE L2 0 3313 3222 1848 159 14 0 chr17 71446347 71446643 -13991837 + AluJb SINE Alu 1 300 -12 291 269 14 113 chr17 71446643 71446676 -13991804 - L2 LINE L2 -91 3222 3187 2393 153 0 0 chr17 71446860 71447207 -13991273 - MER7A DNA MER2_type -1 345 1 1131 110 7 0 chr17 71447310 71447465 -13991015 + L1PA11 LINE L1 6019 6174 0 564 270 122 34 chr17 71447511 71447978 -13990502 - L1ME4a LINE L1 -749 5397 4890 292 288 14 0 chr17 71448492 71448565 -13989915 - MER5A DNA MER1_type -53 136 63 704 304 165 32 chr17 71449767 71450222 -13988258 + L2 LINE L2 2516 2909 -404 1427 234 33 40 chr17 71450222 71450620 -13987860 + MLT2C1 LTR ERVL 1 395 -2 704 304 165 32 chr17 71450620 71450862 -13987618 + L2 LINE L2 2909 3313 0 2254 97 3 7 chr17 71450930 71451230 -13987250 + AluSq SINE Alu 1 299 -14 401 297 42 57 chr17 71451304 71451496 -13986984 + L1MC4a LINE L1 5727 5917 -204 2360 132 13 42 chr17 71452244 71452425 -13986055 + MLT1C LTR MaLR 3 95 -301 1496 126 9 144 chr17 71452425 71452759 -13985721 + AluJb SINE Alu 1 289 -23 2360 132 13 42 chr17 71452759 71453002 -13985478 + MLT1C LTR MaLR 95 344 -52 1230 136 25 5 chr17 71453030 71453229 -13985251 - L1PA14 LINE L1 -1 6160 5958 * 5888 78 17 0 chr17 71453197 71453982 -13984498 - L1PA14 LINE L1 -108 6053 5256 474 146 12 12 chr17 71453982 71454064 -13984416 + MLT1C LTR MaLR 385 466 -1 4152 124 22 16 chr17 71454227 71454872 -13983608 - L1MA6 LINE L1 -4 6296 5648 2104 146 24 11 chr17 71454873 71455050 -13983430 + L1M2 LINE L1 5088 5261 -1030 1695 198 17 0 chr17 71455050 71455348 -13983132 + AluJo SINE Alu 1 303 -9 2104 146 24 11 chr17 71455348 71455726 -13982754 + L1M2 LINE L1 5261 5650 -641 23 68 0 0 chr17 71456345 71456389 -13982091 + AT_rich Low_complexity Low_complexity 1 44 0 2418 73 0 29 chr17 71456885 71457200 -13981280 + AluSx SINE Alu 1 306 -6 197 169 119 51 chr17 71457310 71457369 -13981111 + L2 LINE L2 3208 3270 -2 937 250 44 40 chr17 71458460 71458756 -13979724 + L1ME1 LINE L1 5824 6120 -46 263 173 19 0 chr17 71458758 71458810 -13979670 - L1M4 LINE L1 -3783 2363 2311 281 190 0 0 chr17 71458811 71458869 -13979611 + L1MA10 LINE L1 6265 6322 -12 236 329 26 26 chr17 71458906 71458982 -13979498 - MIR SINE MIR -174 88 13 435 318 17 6 chr17 71459119 71459292 -13979188 + L1ME4a LINE L1 5562 5736 -385 335 240 38 77 chr17 71459398 71459581 -13978899 + L1ME4a LINE L1 5944 6119 -2 2042 122 77 19 chr17 71461244 71461663 -13976817 - MER61D LTR ERV1 0 501 3 1926 188 22 14 chr17 71463061 71463423 -13975057 - MLT1A1 LTR MaLR 0 365 1 319 221 21 63 chr17 71463904 71463999 -13974481 - MIR SINE MIR -75 133 43 2275 113 7 0 chr17 71464776 71465086 -13973394 - AluSx SINE Alu 0 312 1 275 26 51 0 chr17 71465354 71465393 -13973087 + (TAATG)n Simple_repeat Simple_repeat 1 41 0 192 350 0 17 chr17 71465818 71465878 -13972602 + L2 LINE L2 3213 3271 -1 2362 88 0 7 chr17 71466538 71466844 -13971636 - AluY SINE Alu -7 304 1 428 302 83 30 chr17 71467403 71467572 -13970908 + MER5B DNA MER1_type 1 178 0 189 299 104 26 chr17 71467861 71467938 -13970542 + L2 LINE L2 3210 3292 -21 303 164 0 0 chr17 71467995 71468050 -13970430 - MIR SINE MIR -70 192 138 1448 176 39 4 chr17 71468063 71468319 -13970161 + MLT1E1 LTR MaLR 7 271 -383 780 178 15 7 chr17 71468401 71468536 -13969944 + MLT1E1 LTR MaLR 519 654 0 247 244 35 35 chr17 71468552 71468638 -13969842 - MIR SINE MIR -143 119 34 2397 89 0 13 chr17 71469185 71469499 -13968981 - AluY SINE Alu -1 310 1 458 242 10 0 chr17 71469832 71469931 -13968549 + MIR SINE MIR 54 153 -109 458 242 106 57 chr17 71470159 71470423 -13968057 + MLT1J LTR MaLR 232 508 -3 2312 85 3 0 chr17 71470849 71471143 -13967337 - THE1B LTR MaLR -69 295 1 640 340 73 45 chr17 71471151 71471660 -13966820 + L3 LINE CR1 989 1511 -66 229 316 51 71 chr17 71471752 71471948 -13966532 - MIR SINE MIR -5 257 66 192 40 0 0 chr17 71472391 71472416 -13966064 + (CA)n Simple_repeat Simple_repeat 1 25 0 446 266 0 0 chr17 71473056 71473150 -13965330 + L2 LINE L2 3220 3313 0 2358 84 3 10 chr17 71474800 71475109 -13963371 - AluSp SINE Alu -6 307 1 1671 132 69 50 chr17 71475585 71475888 -13962592 + AluJo SINE Alu 1 309 -3 370 375 7 14 chr17 71476144 71476288 -13962192 + L2 LINE L2 3117 3259 -13 243 61 0 0 chr17 71476288 71476321 -13962159 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 1993 123 0 58 chr17 71476415 71476740 -13961740 - AluSx SINE Alu -6 306 1 296 289 117 32 chr17 71478006 71478323 -13960157 - L2 LINE L2 -4 3268 2923 863 337 51 38 chr17 71478414 71479019 -13959461 - L2 LINE L2 -382 2932 2320 486 321 11 11 chr17 71479903 71480087 -13958393 + MIR SINE MIR 32 215 -47 236 280 34 42 chr17 71480372 71480490 -13957990 + Charlie8 DNA MER1_type 95 211 -2206 406 295 53 37 chr17 71480571 71480761 -13957719 + MIR SINE MIR 70 262 0 2122 133 23 0 chr17 71481380 71481682 -13956798 + AluSx SINE Alu 1 309 -3 27 29 0 0 chr17 71482794 71482828 -13955652 + AT_rich Low_complexity Low_complexity 1 34 0 303 283 45 73 chr17 71484341 71484588 -13953892 - L1M4 LINE L1 -3222 2924 2685 34 55 0 0 chr17 71485121 71485176 -13953304 + AT_rich Low_complexity Low_complexity 1 55 0 21 36 0 0 chr17 71485222 71485250 -13953230 + AT_rich Low_complexity Low_complexity 1 28 0 2423 73 0 7 chr17 71485479 71485779 -13952701 + AluY SINE Alu 1 298 -13 191 284 90 113 chr17 71486379 71486601 -13951879 + L3b LINE CR1 1155 1371 -212 234 281 0 0 chr17 71486931 71486988 -13951492 - L2 LINE L2 0 3313 3257 2388 74 7 3 chr17 71487330 71487627 -13950853 - AluY SINE Alu -13 298 1 281 258 62 0 chr17 71488028 71488156 -13950324 + (TA)n Simple_repeat Simple_repeat 1 136 0 201 356 89 7 chr17 71488166 71488312 -13950168 - MIR SINE MIR -73 189 32 431 279 12 43 chr17 71488395 71488556 -13949924 + MIR SINE MIR 63 218 -44 1990 123 9 59 chr17 71488600 71488924 -13949556 + AluSg SINE Alu 1 308 -2 807 264 30 0 chr17 71489222 71489423 -13949057 + MIR SINE MIR 7 213 -49 308 297 94 8 chr17 71489509 71489637 -13948843 - MIR SINE MIR -118 144 6 1576 175 17 14 chr17 71490023 71490320 -13948160 + AluJb SINE Alu 1 298 -14 2453 150 30 48 chr17 71491726 71492167 -13946313 - Tigger2a DNA MER2_type 0 434 2 1922 142 3 16 chr17 71493327 71493643 -13944837 + AluJb SINE Alu 1 312 0 7001 164 21 33 chr17 71494121 71494475 -13944005 + L1MC/D LINE L1 3908 4265 -1925 2023 80 8 0 chr17 71494475 71494726 -13943754 + AluSp SINE Alu 1 253 -60 7001 164 21 33 chr17 71494726 71496336 -13942144 + L1MC/D LINE L1 4265 5844 -346 3370 171 25 128 chr17 71496437 71496860 -13941620 + MER54B LTR ERVL 5 470 -431 501 125 0 0 chr17 71496860 71496932 -13941548 + L1P LINE L1 5346 5417 -748 3370 171 25 128 chr17 71496932 71496997 -13941483 + MER54B LTR ERVL 470 540 -361 1687 129 96 11 chr17 71496997 71497269 -13941211 + AluY SINE Alu 1 295 -16 3370 171 25 128 chr17 71497269 71497676 -13940804 + MER54B LTR ERVL 540 901 0 1916 154 3 3 chr17 71498223 71498516 -13939964 - AluSx SINE Alu -17 295 3 2653 115 3 21 chr17 71498763 71499145 -13939335 - THE1C LTR MaLR 0 375 1 4238 143 44 13 chr17 71499675 71500380 -13938100 + LTR8A LTR ERV1 1 727 0 1281 249 33 51 chr17 71500535 71500988 -13937492 + MLT2C2 LTR ERVL 20 464 0 2637 194 98 65 chr17 71501164 71501919 -13936561 + LTR19C LTR ERV1 1 779 0 21 36 0 0 chr17 71503045 71503073 -13935407 + AT_rich Low_complexity Low_complexity 1 28 0 372 318 24 47 chr17 71503103 71503220 -13935260 + L1M4 LINE L1 2209 2320 -3826 1768 164 0 33 chr17 71503220 71503524 -13934956 + AluJb SINE Alu 1 294 -18 372 318 24 47 chr17 71503524 71503617 -13934863 + L1M4 LINE L1 2320 2414 -3732 412 270 13 57 chr17 71503703 71503862 -13934618 + Charlie8 DNA MER1_type 59 210 -2207 1227 243 117 45 chr17 71503899 71504738 -13933742 + L1MDa LINE L1 1661 4118 -2422 917 188 23 6 chr17 71504738 71504914 -13933566 + MER58A DNA MER1_type 40 218 -6 849 276 92 46 chr17 71506087 71506802 -13931678 + L1ME3 LINE L1 1236 1983 -4738 2027 247 54 33 chr17 71506858 71507616 -13930864 + L1ME3 LINE L1 4050 4823 -1717 1041 192 163 97 chr17 71507659 71507924 -13930556 - MLT1D LTR MaLR 0 505 259 510 17 0 0 chr17 71507924 71507983 -13930497 + (TG)n Simple_repeat Simple_repeat 1 59 0 1041 192 163 97 chr17 71507983 71508129 -13930351 - MLT1D LTR MaLR -246 259 59 4997 136 36 38 chr17 71508129 71508955 -13929525 + LTR1B LTR ERV1 2 826 0 1041 192 163 97 chr17 71508955 71508995 -13929485 - MLT1D LTR MaLR -446 59 23 1675 246 123 10 chr17 71509032 71509944 -13928536 + L1ME3 LINE L1 4871 5884 -680 3262 133 49 54 chr17 71510016 71510611 -13927869 + LTR36 LTR ERV1 19 610 -1 1067 275 105 17 chr17 71510622 71511087 -13927393 + L1ME3 LINE L1 5898 6403 -153 1041 126 0 0 chr17 71511099 71511242 -13927238 + FLAM_C SINE Alu 1 143 0 239 305 12 24 chr17 71511252 71511334 -13927146 + L1ME3 LINE L1 6452 6532 -24 316 263 21 21 chr17 71511361 71511456 -13927024 + MARNA DNA Mariner 346 440 -146 758 204 61 25 chr17 71511554 71511750 -13926730 - MER105 DNA DNA -1 203 1 4299 176 11 51 chr17 71512403 71513221 -13925259 + LTR1 LTR ERV1 1 785 0 294 359 153 0 chr17 71513875 71514006 -13924474 - L2 LINE L2 -6 3266 3116 2442 83 0 10 chr17 71514045 71514359 -13924121 + AluY SINE Alu 1 311 0 687 202 0 8 chr17 71514540 71514664 -13923816 + FLAM_A SINE Alu 4 126 -7 204 309 73 0 chr17 71515599 71515654 -13922826 - L2 LINE L2 -9 3304 3246 676 314 85 16 chr17 71515834 71516152 -13922328 - L2 LINE L2 -424 2890 2551 5317 77 9 9 chr17 71516325 71517012 -13921468 - L1PA10 LINE L1 0 6168 5482 227 355 0 0 chr17 71517012 71517088 -13921392 - MIR SINE MIR -99 109 34 421 290 48 27 chr17 71517874 71518060 -13920420 + MIR SINE MIR 72 261 -1 2132 94 3 29 chr17 71518132 71518439 -13920041 - AluSg SINE Alu -11 299 1 842 288 19 23 chr17 71519655 71519912 -13918568 - MIR SINE MIR 0 262 7 2510 174 2 2 chr17 71519956 71520359 -13918121 - MER57A LTR ERV1 0 403 1 180 0 0 0 chr17 71520544 71520564 -13917916 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2510 166 5 47 chr17 71520568 71520808 -13917672 - L1PA16 LINE L1 -10 6156 5942 2040 104 3 20 chr17 71520808 71521105 -13917375 - AluSp SINE Alu -21 292 1 2510 166 5 47 chr17 71521105 71521311 -13917169 - L1PA16 LINE L1 -224 5942 5729 180 97 0 0 chr17 71521434 71521465 -13917015 + (TTAG)n Simple_repeat Simple_repeat 2 32 0 2062 120 0 7 chr17 71521841 71522132 -13916348 + AluSx SINE Alu 14 302 -10 627 268 82 11 chr17 71522155 71522338 -13916142 + MER63A DNA MER1_type 4 199 -11 1327 204 91 32 chr17 71522623 71523107 -13915373 + MLT1F1 LTR MaLR 11 567 0 281 299 0 13 chr17 71523247 71523263 -13915217 + CT-rich Low_complexity Low_complexity 3 18 -60 2229 130 72 23 chr17 71523263 71523610 -13914870 - THE1B LTR MaLR 0 364 1 281 299 0 13 chr17 71523610 71523670 -13914810 + CT-rich Low_complexity Low_complexity 18 78 0 299 287 96 29 chr17 71523747 71523883 -13914597 + MIR SINE MIR 45 189 -73 485 256 117 3 chr17 71523906 71524084 -13914396 + MIR SINE MIR 50 249 -13 194 262 9 140 chr17 71524534 71524641 -13913839 - L2 LINE L2 -181 3091 2999 6109 76 5 1 chr17 71525456 71526236 -13912244 + L1PA10 LINE L1 5386 6168 0 262 268 54 45 chr17 71526769 71526881 -13911599 + MER103 DNA DNA 8 120 -46 2163 158 39 23 chr17 71528074 71528461 -13910019 - MLT2C1 LTR ERVL -3 394 2 2172 59 3 21 chr17 71528465 71528788 -13909692 + AluY SINE Alu 1 318 0 813 204 0 64 chr17 71529371 71529543 -13908937 - FRAM SINE Alu -12 164 4 1824 148 0 46 chr17 71530345 71530650 -13907830 - AluJo SINE Alu -21 291 1 698 176 15 59 chr17 71530651 71530769 -13907711 + Charlie5 DNA MER1_type 2391 2498 -87 1703 147 16 32 chr17 71530769 71531081 -13907399 - AluJo SINE Alu -5 307 1 698 176 15 59 chr17 71531081 71531166 -13907314 + Charlie5 DNA MER1_type 2498 2585 0 1777 146 68 10 chr17 71531824 71532119 -13906361 - AluJb SINE Alu 0 312 1 785 299 76 40 chr17 71532857 71533211 -13905269 - L2 LINE L2 0 3313 2947 1066 255 29 104 chr17 71533237 71533392 -13905088 - L2 LINE L2 -701 2613 2448 2055 138 3 3 chr17 71533392 71533697 -13904783 + AluSx SINE Alu 5 309 -3 1066 255 29 104 chr17 71533697 71533992 -13904488 - L2 LINE L2 -866 2448 2197 1325 189 26 15 chr17 71534117 71534383 -13904097 - MSTB1 LTR MaLR 0 432 164 564 99 0 12 chr17 71534383 71534464 -13904016 - MADE1 DNA Mariner 0 80 1 503 273 47 17 chr17 71534470 71534642 -13903838 - MSTB1 LTR MaLR -280 177 1 512 245 68 37 chr17 71534727 71534890 -13903590 + MIR SINE MIR 89 256 -6 917 210 82 9 chr17 71535189 71535408 -13903072 - MIR SINE MIR -1 261 27 2035 77 57 20 chr17 71535444 71535744 -13902736 - AluY SINE Alu 0 311 1 2054 130 6 13 chr17 71536024 71536386 -13902094 + AluSq SINE Alu 1 360 0 270 328 15 23 chr17 71536588 71536719 -13901761 + MIR3 SINE MIR 3 132 -76 2025 136 0 16 chr17 71537022 71537331 -13901149 - AluSx SINE Alu -8 304 1 252 0 0 0 chr17 71537341 71537369 -13901111 + (T)n Simple_repeat Simple_repeat 1 28 0 2130 99 7 17 chr17 71537892 71538194 -13900286 - AluSx SINE Alu -13 299 1 7647 48 0 27 chr17 71538273 71539287 -13899193 - L1PA5 LINE L1 0 6154 5152 2204 49 4 0 chr17 71539576 71539842 -13898638 + AluY SINE Alu 44 310 -1 4032 62 4 16 chr17 71541242 71541758 -13896722 + L1PA8 LINE L1 5663 6172 0 7253 101 13 23 chr17 71542079 71543096 -13895384 + LTR13 LTR ERVK 1 1007 0 443 235 7 39 chr17 71543819 71543972 -13894508 + MER103 DNA DNA 3 150 -16 281 378 0 0 chr17 71546033 71546123 -13892357 - L3 LINE CR1 -7 1570 1481 426 318 20 0 chr17 71546317 71546465 -13892015 - MIR SINE MIR -13 249 99 330 300 8 39 chr17 71546741 71546871 -13891609 - L3 LINE CR1 -283 1294 1169 1047 160 0 11 chr17 71546873 71546884 -13891596 - AluJb SINE Alu 0 312 302 204 0 0 36 chr17 71546884 71546912 -13891568 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 1047 160 0 11 chr17 71546912 71547075 -13891405 - AluJb SINE Alu -10 302 126 660 152 9 27 chr17 71547206 71547318 -13891162 - FLAM_C SINE Alu -32 111 2 266 364 74 0 chr17 71547437 71547558 -13890922 + L2 LINE L2 3143 3272 0 224 256 0 73 chr17 71547556 71547638 -13890842 + MIR SINE MIR 131 206 -56 * 442 336 32 75 chr17 71548273 71548526 -13889954 + MIR SINE MIR 8 249 -13 933 195 73 34 chr17 71548652 71548857 -13889623 - MER20 DNA MER1_type 0 219 7 21 0 0 0 chr17 71548949 71548970 -13889510 + AT_rich Low_complexity Low_complexity 1 21 0 28 91 0 0 chr17 71549027 71549104 -13889376 + AT_rich Low_complexity Low_complexity 1 77 0 377 287 78 58 chr17 71549150 71549408 -13889072 - L1M4 LINE L1 -1103 5043 4781 3808 194 43 50 chr17 71549491 71550750 -13887730 - L1MB7 LINE L1 0 6184 4929 2171 113 0 43 chr17 71551377 71551703 -13886777 - AluSx SINE Alu 0 312 1 418 354 10 25 chr17 71553383 71553581 -13884899 - MIR SINE MIR -8 254 60 708 168 27 7 chr17 71554316 71554584 -13883896 + CT-rich Low_complexity Low_complexity 1 273 0 244 271 144 25 chr17 71554602 71554720 -13883760 + MIR SINE MIR 9 140 -122 4125 77 2 20 chr17 71556259 71556815 -13881665 - L1MA1 LINE L1 0 6302 5757 5213 136 9 10 chr17 71556815 71558224 -13880256 - L1M1 LINE L1 -501 5801 4393 390 287 10 10 chr17 71559150 71559251 -13879229 - MER81 DNA DNA -11 103 3 3625 132 7 21 chr17 71559480 71560048 -13878432 + L1PA16 LINE L1 5593 6152 -14 198 91 0 0 chr17 71561080 71561113 -13877367 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1997 124 0 13 chr17 71562397 71562695 -13875785 - AluSx SINE Alu -17 295 2 301 224 45 0 chr17 71563497 71563564 -13874916 + MER116 DNA Mariner 3 72 -8 892 146 0 20 chr17 71563593 71563744 -13874736 - LTR7 LTR ERV1 0 450 303 907 112 8 24 chr17 71563951 71564120 -13874360 - LTR7 LTR ERV1 -232 218 1 3041 111 8 37 chr17 71564120 71564634 -13873846 - HERVH LTR ERV1 0 7713 7215 * 4112 149 45 37 chr17 71564632 71565756 -13872724 - HERVH LTR ERV1 -6259 1454 1 830 199 58 24 chr17 71565756 71565962 -13872518 - LTR7 LTR ERV1 0 450 238 750 141 0 28 chr17 71566112 71566254 -13872226 - LTR7 LTR ERV1 -312 138 1 686 198 140 13 chr17 71566376 71566533 -13871947 + MER58C DNA MER1_type 35 211 -4 471 229 85 35 chr17 71566586 71566780 -13871700 - MIR SINE MIR -1 261 2 704 171 0 79 chr17 71566800 71566940 -13871540 + FLAM_C SINE Alu 15 143 0 233 299 13 13 chr17 71567010 71567087 -13871393 + MIR SINE MIR 48 124 -138 682 256 51 35 chr17 71567089 71567405 -13871075 + LTR37A LTR ERV1 106 426 0 224 261 180 9 chr17 71567758 71567869 -13870611 - MIR SINE MIR -13 249 120 1998 130 0 7 chr17 71568158 71568521 -13869959 + AluSg SINE Alu 1 361 0 198 103 0 0 chr17 71568722 71568751 -13869729 + (TA)n Simple_repeat Simple_repeat 2 30 0 209 200 0 0 chr17 71568888 71568928 -13869552 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1043 224 67 5 chr17 71569762 71569972 -13868508 - MER58A DNA MER1_type -1 223 1 518 287 17 33 chr17 71570018 71570199 -13868281 + MLT1J2 LTR MaLR 30 207 -243 728 176 47 18 chr17 71570215 71570385 -13868095 - LTR38 LTR ERV1 0 556 382 2137 102 0 7 chr17 71570411 71570694 -13867786 + AluSx SINE Alu 14 294 -18 921 245 108 89 chr17 71570722 71570915 -13867565 - LTR38B LTR ERV1 -166 444 256 2313 82 0 16 chr17 71570915 71571231 -13867249 - AluY SINE Alu 0 311 1 921 245 108 89 chr17 71571231 71571473 -13867007 - LTR38B LTR ERV1 -354 256 1 295 335 68 12 chr17 71571505 71571666 -13866814 + MLT1J2 LTR MaLR 272 441 -9 295 333 72 0 chr17 71571770 71571908 -13866572 - MLT1L LTR MaLR -48 567 420 1711 179 0 10 chr17 71572248 71572555 -13865925 + AluJb SINE Alu 1 304 -8 1999 122 70 29 chr17 71573698 71574043 -13864437 + MLT1C LTR MaLR 7 365 -102 1061 212 29 83 chr17 71574070 71574317 -13864163 + MER70-int LTR ERVL 2401 2660 -2870 2271 79 0 10 chr17 71574317 71574609 -13863871 - AluY SINE Alu -22 289 1 1061 212 29 83 chr17 71574609 71574748 -13863732 + MER70-int LTR ERVL 2660 3408 -2122 959 335 38 2 chr17 71575092 71575492 -13862988 + MER70-int LTR ERVL 2715 3128 -1895 347 237 32 11 chr17 71575601 71575694 -13862786 + MER70B LTR ERVL 471 565 -13 238 374 55 16 chr17 71575741 71575995 -13862485 - L1ME LINE L1 -5712 358 95 434 235 20 0 chr17 71577554 71577652 -13860828 + MER2 DNA MER2_type 1 100 -245 213 39 0 0 chr17 71578553 71578579 -13859901 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1829 106 0 0 chr17 71578582 71578817 -13859663 - AluSq SINE Alu -44 269 35 1987 139 111 24 chr17 71579713 71580093 -13858387 + MSTA LTR MaLR 1 413 -15 371 113 84 42 chr17 71580102 71580173 -13858307 - THE1C LTR MaLR -301 74 1 1175 258 93 40 chr17 71580345 71580850 -13857630 + MLT1E LTR MaLR 13 593 0 2853 144 19 30 chr17 71581964 71582493 -13855987 - L1MA8 LINE L1 0 6291 5769 1441 138 38 4 chr17 71582493 71582725 -13855755 - L1PA13 LINE L1 -7 6156 5909 783 124 0 0 chr17 71582725 71582838 -13855642 - L1MA8 LINE L1 -512 5788 5676 430 365 71 30 chr17 71583805 71584337 -13854143 + L2 LINE L2 346 899 -2415 211 85 43 0 chr17 71584443 71584490 -13853990 + T-rich Low_complexity Low_complexity 2 50 0 22 0 0 0 chr17 71584710 71584732 -13853748 + AT_rich Low_complexity Low_complexity 1 22 0 792 213 19 19 chr17 71584732 71584892 -13853588 - FRAM SINE Alu -3 163 4 451 275 49 49 chr17 71585343 71585381 -13853099 + L2 LINE L2 1673 1710 -1604 2160 107 7 10 chr17 71585381 71585681 -13852799 + AluSx SINE Alu 1 299 -13 451 275 49 49 chr17 71585681 71585886 -13852594 + L2 LINE L2 1709 1916 -1398 226 288 182 35 chr17 71587627 71587797 -13850683 - MLT1K LTR MaLR -391 197 3 209 146 21 42 chr17 71589173 71589221 -13849259 + MIR SINE MIR 39 85 -177 1049 285 95 9 chr17 71589221 71589642 -13848838 + LTR16A1 LTR ERVL 1 457 0 777 311 18 22 chr17 71589832 71590164 -13848316 + HERV16 LTR ERVL 262 615 -4425 1366 351 40 21 chr17 71590419 71591573 -13846907 + HERV16 LTR ERVL 897 2186 -3425 958 328 62 30 chr17 71591570 71591973 -13846507 - HERV16 LTR ERVL -1962 3034 2619 * 1595 248 244 42 chr17 71592056 71592693 -13845787 + L2 LINE L2 808 1315 -1999 2011 99 57 3 chr17 71592693 71593015 -13845465 - AluSg SINE Alu 0 310 1 1595 248 244 42 chr17 71593015 71593393 -13845087 + L2 LINE L2 1315 2028 -1286 2240 115 0 0 chr17 71593491 71593787 -13844693 - AluSc SINE Alu -12 297 2 2666 196 30 34 chr17 71593799 71594391 -13844089 - L1MD3 LINE L1 0 7995 7406 520 224 10 0 chr17 71594394 71594492 -13843988 - MLT1F1 LTR MaLR -443 124 26 441 278 32 0 chr17 71594492 71594618 -13843862 - L1MD3 LINE L1 -706 7289 7160 277 169 17 0 chr17 71594635 71594694 -13843786 - Charlie2a DNA MER1_type -61 2801 2742 315 49 0 0 chr17 71594722 71594763 -13843717 + (TG)n Simple_repeat Simple_repeat 2 42 0 631 195 38 60 chr17 71594763 71594948 -13843532 - Charlie2a DNA MER1_type -1217 1645 1465 231 146 0 0 chr17 71595061 71595102 -13843378 + (T)n Simple_repeat Simple_repeat 1 41 0 23 33 0 0 chr17 71595120 71595150 -13843330 + AT_rich Low_complexity Low_complexity 1 30 0 2164 96 26 19 chr17 71595159 71595198 -13843282 - L1MA1 LINE L1 -6 6296 6259 2432 114 31 20 chr17 71595198 71595556 -13842924 + THE1B LTR MaLR 3 364 0 2164 96 26 19 chr17 71595556 71595829 -13842651 - L1MA1 LINE L1 -43 6259 5982 2369 55 7 3 chr17 71595833 71596125 -13842355 - AluY SINE Alu -18 293 1 1027 90 0 0 chr17 71596125 71596258 -13842222 - AluSc SINE Alu -176 133 1 4819 120 36 20 chr17 71596259 71597550 -13840930 - L1MA1 LINE L1 -316 5986 4674 25 0 0 0 chr17 71597621 71597646 -13840834 + AT_rich Low_complexity Low_complexity 1 25 0 699 275 59 13 chr17 71597646 71597882 -13840598 - Charlie2 DNA MER1_type -2594 268 22 339 296 0 0 chr17 71597970 71598078 -13840402 - Charlie2 DNA MER1_type -828 2034 1927 1417 251 53 11 chr17 71598312 71598859 -13839621 - Charlie2 DNA MER1_type -437 2425 1856 255 318 36 50 chr17 71598888 71599108 -13839372 - Charlie2 DNA MER1_type -2485 297 81 951 269 219 57 chr17 71599164 71599506 -13838974 + L2 LINE L2 2023 2308 -1005 1868 160 33 30 chr17 71599506 71599869 -13838611 + THE1B LTR MaLR 1 364 0 951 269 219 57 chr17 71599869 71600618 -13837862 + L2 LINE L2 2308 3307 -6 663 258 78 14 chr17 71601454 71601671 -13836809 + MIR SINE MIR 32 262 0 659 243 29 23 chr17 71601852 71602025 -13836455 + MIR SINE MIR 37 210 -52 380 105 0 116 chr17 71602651 71602759 -13835721 + L1PA5 LINE L1 6079 6154 0 588 138 0 59 chr17 71602959 71603111 -13835369 + (TTCC)n Simple_repeat Simple_repeat 1 143 0 1788 157 10 20 chr17 71603111 71603417 -13835063 - AluJb SINE Alu -9 303 1 588 341 78 44 chr17 71603714 71604535 -13833945 - L1MEd LINE L1 -738 1752 819 204 200 0 46 chr17 71605658 71605723 -13832757 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 276 222 33 56 chr17 71606328 71606418 -13832062 - L2 LINE L2 0 3272 3185 23 0 0 0 chr17 71606699 71606722 -13831758 + AT_rich Low_complexity Low_complexity 1 23 0 2082 113 7 7 chr17 71607730 71608014 -13830466 + AluSc SINE Alu 1 284 -25 662 196 68 7 chr17 71608339 71608487 -13829993 + MLT1B LTR MaLR 2 158 -232 426 169 48 0 chr17 71608487 71608570 -13829910 - FLAM_C SINE Alu -9 134 48 2339 85 41 44 chr17 71609084 71609449 -13829031 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr17 71609753 71609775 -13828705 + AT_rich Low_complexity Low_complexity 1 22 0 360 314 87 34 chr17 71609778 71609985 -13828495 + L1 LINE L1 3772 3989 -2157 283 143 0 0 chr17 71609996 71610045 -13828435 - AluSx SINE Alu -2 300 252 1781 145 0 18 chr17 71610046 71610322 -13828158 - AluSx SINE Alu -37 275 5 1069 210 66 43 chr17 71610362 71610392 -13828088 - MLT2C1 LTR ERVL -14 383 355 279 0 0 0 chr17 71610392 71610423 -13828057 + (CA)n Simple_repeat Simple_repeat 1 31 0 1069 210 66 43 chr17 71610423 71610739 -13827741 - MLT2C1 LTR ERVL -42 355 29 2137 134 0 10 chr17 71611073 71611387 -13827093 + AluSx SINE Alu 1 311 -1 15774 92 6 0 chr17 71612306 71615158 -13823322 + L1PA8A LINE L1 2989 5855 -276 233 304 0 54 chr17 71616206 71616298 -13822182 - MIR SINE MIR -4 258 172 183 80 0 0 chr17 71616716 71616741 -13821739 + (GA)n Simple_repeat Simple_repeat 2 26 0 199 349 30 30 chr17 71616854 71616986 -13821494 + L2 LINE L2 2968 3099 -173 633 261 222 36 chr17 71617073 71617572 -13820908 + MLT1L LTR MaLR 19 610 -5 665 181 5 103 chr17 71617594 71617798 -13820682 - MER3 DNA MER1_type -7 202 19 186 103 0 0 chr17 71618369 71618398 -13820082 + (CA)n Simple_repeat Simple_repeat 2 30 0 896 144 0 0 chr17 71618994 71619126 -13819354 + FLAM_C SINE Alu 1 132 -1 1809 141 52 6 chr17 71619816 71620142 -13818338 + L1MC1 LINE L1 5986 6326 -7 23 0 0 0 chr17 71622478 71622501 -13815979 + AT_rich Low_complexity Low_complexity 1 23 0 194 62 31 0 chr17 71622558 71622590 -13815890 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3386 77 9 0 chr17 71623053 71623509 -13814971 + L1PA10 LINE L1 5709 6168 0 24 0 0 0 chr17 71625069 71625093 -13813387 + AT_rich Low_complexity Low_complexity 1 24 0 1900 159 13 3 chr17 71626048 71626350 -13812130 - AluJo SINE Alu -7 305 1 2147 114 10 0 chr17 71626587 71626886 -13811594 + AluSq SINE Alu 1 302 -11 357 78 0 0 chr17 71627503 71627554 -13810926 + Tigger1 DNA MER2_type 370 420 -1998 810 336 126 0 chr17 71627558 71627930 -13810550 - L2 LINE L2 -642 2672 2254 458 123 27 0 chr17 71628072 71628145 -13810335 + AluSg/x SINE Alu 215 289 -20 13899 132 25 12 chr17 71628253 71630618 -13807862 + Tigger1 DNA MER2_type 24 2418 0 2231 68 68 7 chr17 71631191 71631486 -13806994 + AluSp SINE Alu 1 313 0 197 255 59 0 chr17 71632441 71632492 -13805988 - MIR SINE MIR -90 172 119 260 27 27 0 chr17 71633213 71633250 -13805230 + (CA)n Simple_repeat Simple_repeat 2 39 0 1277 277 65 24 chr17 71633388 71634600 -13803880 + L1MEc LINE L1 1552 2772 -3443 316 203 0 0 chr17 71634892 71634966 -13803514 + L1ME1 LINE L1 6090 6163 -3 7653 20 12 0 chr17 71635179 71636273 -13802207 - L1PA3 LINE L1 0 6155 5057 856 216 22 0 chr17 71636418 71636599 -13801881 - MER5A DNA MER1_type -1 188 4 328 287 72 14 chr17 71637337 71637495 -13800985 + MIR SINE MIR 12 183 -25 23 33 0 0 chr17 71638405 71638435 -13800045 + AT_rich Low_complexity Low_complexity 1 30 0 4074 172 40 23 chr17 71640530 71640612 -13797868 - L1MB1 LINE L1 -5 6163 6084 2636 175 42 4 chr17 71640612 71641087 -13797393 + LTR42 LTR ERVL 1 493 -2 4074 172 40 23 chr17 71641087 71641686 -13796794 - L1MB1 LINE L1 -84 6084 5461 1438 203 37 64 chr17 71641686 71642091 -13796389 - MSTD LTR MaLR -2 394 1 4074 172 40 23 chr17 71642091 71642288 -13796192 - L1MB1 LINE L1 -707 5461 5269 6353 125 58 41 chr17 71642290 71642555 -13795925 + Tigger3b DNA MER2_type 1 260 -2768 213 39 0 0 chr17 71642555 71642581 -13795899 + (CTATA)n Simple_repeat Simple_repeat 2 27 0 6353 125 58 41 chr17 71642581 71642676 -13795804 + Tigger3b DNA MER2_type 260 352 -2676 4810 21 9 0 chr17 71642676 71643242 -13795238 + L1PA2 LINE L1 5582 6152 -3 6353 125 58 41 chr17 71643242 71644091 -13794389 + Tigger3b DNA MER2_type 352 1231 0 2439 201 6 0 chr17 71644091 71644613 -13793867 - L1MB1 LINE L1 -878 5268 4744 184 303 180 0 chr17 71645501 71645590 -13792890 + MIR SINE MIR 49 153 -109 24 41 0 20 chr17 71647631 71647655 -13790825 + AT_rich Low_complexity Low_complexity 1 24 -24 1772 154 3 50 chr17 71647655 71647973 -13790507 - AluJb SINE Alu -9 303 1 24 41 0 20 chr17 71647973 71647997 -13790483 + AT_rich Low_complexity Low_complexity 24 48 0 404 310 109 52 chr17 71648660 71649082 -13789398 - L2 LINE L2 -1 3312 2868 274 266 0 0 chr17 71650103 71650167 -13788313 + MER52A LTR ERV1 1 64 -1691 618 291 0 0 chr17 71650193 71650334 -13788146 + MER52A LTR ERV1 1 141 -1614 6756 174 89 17 chr17 71650361 71651594 -13786886 + MER52A LTR ERV1 434 1755 0 395 320 93 13 chr17 71651930 71652155 -13786325 - MIR SINE MIR -18 244 2 1899 165 10 7 chr17 71656198 71656501 -13781979 - AluJb SINE Alu -7 305 2 22 70 0 0 chr17 71656509 71656552 -13781928 + AT_rich Low_complexity Low_complexity 1 43 0 605 337 76 44 chr17 71657188 71657687 -13780793 - L2 LINE L2 -800 2514 2000 2943 254 78 39 chr17 71658214 71659193 -13779287 - L1ME1 LINE L1 -11 6155 5102 2238 110 0 0 chr17 71659193 71659485 -13778995 - AluSx SINE Alu -20 292 1 2943 254 78 39 chr17 71659485 71659968 -13778512 - L1ME1 LINE L1 -1064 5102 4639 842 205 6 0 chr17 71661529 71661685 -13776795 + FRAM SINE Alu 1 156 -20 283 239 31 98 chr17 71661984 71662147 -13776333 - MER5B DNA MER1_type -3 175 24 453 156 0 0 chr17 71662221 71662317 -13776163 + CT-rich Low_complexity Low_complexity 3 98 0 1890 18 0 0 chr17 71662403 71662622 -13775858 - L1PA2 LINE L1 -1 6154 5936 6950 235 59 25 chr17 71664071 71665034 -13773446 + L1MB8 LINE L1 16 945 -6014 4111 181 15 4 chr17 71665034 71665758 -13772722 + MER44D DNA MER2_type 2 605 0 6950 235 59 25 chr17 71665758 71666914 -13771566 + L1MB8 LINE L1 945 2222 -4737 817 132 0 0 chr17 71666914 71667035 -13771445 + L1PB4 LINE L1 6034 6154 -2 6950 235 59 25 chr17 71667035 71667185 -13771295 + L1MB8 LINE L1 2222 2365 -4594 1054 221 70 53 chr17 71667692 71668295 -13770185 + L1MB8 LINE L1 2722 3335 -3622 2291 241 22 4 chr17 71668299 71668976 -13769504 + L1MB8 LINE L1 3474 4162 -2795 3583 183 27 43 chr17 71669122 71669284 -13769196 + L1MB8 LINE L1 6191 6354 -635 2320 77 0 13 chr17 71669284 71669584 -13768896 + AluSc SINE Alu 1 296 -13 3583 183 27 43 chr17 71669584 71670232 -13768248 + L1MB8 LINE L1 6354 6988 -1 1406 49 0 0 chr17 71671884 71672100 -13766380 + AluY SINE Alu 127 342 0 329 330 36 50 chr17 71672167 71672470 -13766010 + L1MCc LINE L1 109 407 -6016 552 277 56 40 chr17 71672807 71673432 -13765048 + L1MCc LINE L1 1129 1759 -4889 522 309 21 41 chr17 71676119 71676313 -13762167 - L2 LINE L2 -6 3307 3118 195 305 85 0 chr17 71676554 71676636 -13761844 + MIR SINE MIR 88 176 -86 848 272 5 18 chr17 71676971 71677195 -13761285 - MER58A DNA MER1_type -2 222 2 189 310 127 35 chr17 71677284 71677426 -13761054 - MIR SINE MIR -18 244 90 15356 152 46 7 chr17 71677818 71679492 -13758988 + L1MA3 LINE L1 15 1622 -6102 324 0 0 0 chr17 71679492 71679528 -13758952 + (CA)n Simple_repeat Simple_repeat 2 37 0 15356 152 46 7 chr17 71679528 71683968 -13754512 + L1MA3 LINE L1 1622 7508 -216 1073 97 87 15 chr17 71684096 71684291 -13754189 + L1MA3 LINE L1 7515 7723 -1 1995 54 105 7 chr17 71684745 71685021 -13753459 + AluY SINE Alu 1 303 -8 21 0 0 0 chr17 71686348 71686369 -13752111 + AT_rich Low_complexity Low_complexity 1 21 0 1838 127 8 4 chr17 71686409 71686677 -13751803 + AluSg SINE Alu 1 269 -41 482 70 0 0 chr17 71686778 71686849 -13751631 + AluSp/q SINE Alu 241 311 -2 659 213 121 10 chr17 71686855 71687062 -13751418 + MIR SINE MIR 33 262 0 267 271 0 0 chr17 71687751 71687810 -13750670 + MLT1H1 LTR MaLR 312 370 -185 2934 104 5 11 chr17 71687866 71688307 -13750173 + L1PA14 LINE L1 5721 6158 -3 5643 29 1 0 chr17 71688587 71689252 -13749228 + L1PA4 LINE L1 5489 6154 -1 182 222 0 0 chr17 71690060 71690096 -13748384 - MER5B DNA MER1_type -10 168 133 190 365 36 15 chr17 71690355 71690492 -13747988 + MIR SINE MIR 2 141 -121 22 35 0 0 chr17 71690771 71690800 -13747680 + AT_rich Low_complexity Low_complexity 1 29 0 1953 160 0 0 chr17 71690800 71691093 -13747387 - AluSx SINE Alu -19 293 1 2000 104 61 0 chr17 71691672 71691952 -13746528 + AluSp SINE Alu 1 297 -16 2205 109 3 10 chr17 71694568 71694871 -13743609 + AluSx SINE Alu 1 301 -11 213 391 54 0 chr17 71694883 71694975 -13743505 - L2 LINE L2 -27 3286 3190 321 283 30 20 chr17 71695067 71695166 -13743314 + MER5B DNA MER1_type 79 178 0 23 33 0 0 chr17 71696262 71696292 -13742188 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr17 71697377 71697404 -13741076 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 239 325 178 13 chr17 71697632 71697789 -13740691 + MIR SINE MIR 66 248 -14 325 295 90 24 chr17 71698140 71698306 -13740174 - MIR SINE MIR 0 262 86 228 67 0 0 chr17 71699352 71699382 -13739098 + (T)n Simple_repeat Simple_repeat 1 30 0 2383 72 0 0 chr17 71699524 71699816 -13738664 + AluY SINE Alu 1 292 -19 182 403 34 17 chr17 71700353 71700472 -13738008 + L2 LINE L2 2953 3073 -199 318 265 20 68 chr17 71701730 71701954 -13736526 - L1ME3 LINE L1 -278 5884 5667 366 275 37 0 chr17 71701955 71702064 -13736416 - MLT1I LTR MaLR 0 409 297 352 285 56 16 chr17 71702387 71702636 -13735844 - L1ME3 LINE L1 -652 5518 5260 1993 119 26 33 chr17 71702680 71702858 -13735622 - AluSx SINE Alu -12 300 123 279 0 0 0 chr17 71702858 71702889 -13735591 + (TG)n Simple_repeat Simple_repeat 2 32 0 1993 119 26 33 chr17 71702889 71703012 -13735468 - AluSx SINE Alu -189 123 1 1147 108 83 5 chr17 71703115 71703136 -13735344 - L1P5 LINE L1 -340 5816 5798 261 0 0 0 chr17 71703136 71703165 -13735315 + (TA)n Simple_repeat Simple_repeat 2 30 0 1147 108 83 5 chr17 71703165 71703347 -13735133 - L1P5 LINE L1 -358 5798 5597 34 42 0 0 chr17 71704195 71704243 -13734237 + AT_rich Low_complexity Low_complexity 1 48 0 1642 182 75 24 chr17 71704593 71704928 -13733552 + MSTA LTR MaLR 77 428 0 4212 188 22 10 chr17 71704928 71705756 -13732724 + MSTA-int LTR MaLR 1 838 -813 1706 184 6 0 chr17 71705857 71706188 -13732292 - Tigger1 DNA MER2_type -1734 684 352 23 68 0 0 chr17 71706345 71706389 -13732091 + AT_rich Low_complexity Low_complexity 1 44 0 50 42 0 0 chr17 71706590 71706661 -13731819 + AT_rich Low_complexity Low_complexity 1 71 0 1185 200 5 5 chr17 71707010 71707215 -13731265 + AluJo SINE Alu 1 205 -107 1497 125 31 0 chr17 71707618 71707874 -13730606 + L1MA3 LINE L1 6042 6305 0 2850 7 0 0 chr17 71707899 71708208 -13730272 + AluYa5 SINE Alu 1 309 -2 246 287 40 53 chr17 71708575 71708725 -13729755 - MLT1I LTR MaLR -389 160 13 1931 46 4 0 chr17 71708842 71709105 -13729375 + L1P LINE L1 2335 2598 -3548 244 222 0 83 chr17 71710918 71710990 -13727490 + L2 LINE L2 3248 3313 0 2338 50 32 0 chr17 71711341 71711624 -13726856 + AluSg SINE Alu 1 292 -18 3886 160 21 11 chr17 71711680 71712423 -13726057 - L1MB2 LINE L1 -2 6169 5419 2301 110 0 10 chr17 71712701 71713002 -13725478 - AluSx SINE Alu -12 300 3 228 238 0 0 chr17 71713047 71713110 -13725370 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 2560 69 0 0 chr17 71713271 71713576 -13724904 - AluSx SINE Alu -7 305 1 2055 140 0 7 chr17 71713742 71714049 -13724431 - AluSq SINE Alu -8 305 1 2347 85 0 3 chr17 71715421 71715737 -13722743 - L1PB1 LINE L1 -2 6149 5835 180 308 39 39 chr17 71715753 71715857 -13722623 - L3 LINE CR1 -133 1444 1341 2239 96 0 3 chr17 71715886 71716179 -13722301 + AluSg SINE Alu 1 292 -18 22 0 0 0 chr17 71716738 71716760 -13721720 + AT_rich Low_complexity Low_complexity 1 22 0 713 191 0 8 chr17 71716847 71716978 -13721502 + FLAM_A SINE Alu 1 130 -3 2062 110 39 3 chr17 71717106 71717388 -13721092 + AluSq SINE Alu 7 298 -15 351 0 0 0 chr17 71717503 71717542 -13720938 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 180 259 0 0 chr17 71717548 71717602 -13720878 + (TA)n Simple_repeat Simple_repeat 2 55 0 2253 109 7 0 chr17 71717789 71718093 -13720387 - AluSg SINE Alu -4 306 1 191 339 0 0 chr17 71718482 71718547 -13719933 - MIR SINE MIR -69 139 75 235 317 138 8 chr17 71719681 71719804 -13718676 + L2 LINE L2 3134 3272 0 522 294 59 6 chr17 71720019 71720189 -13718291 + MIR3 SINE MIR 23 201 -7 4185 72 12 2 chr17 71720525 71721083 -13717397 - L1PA10 LINE L1 0 6168 5605 27 0 0 0 chr17 71721965 71721992 -13716488 + AT_rich Low_complexity Low_complexity 1 27 0 532 317 74 13 chr17 71722074 71722304 -13716176 + MIR SINE MIR 1 244 -18 293 284 42 0 chr17 71722304 71722399 -13716081 - L1ME LINE L1 -456 5665 5567 2204 104 6 28 chr17 71722985 71723303 -13715177 - AluSx SINE Alu -1 311 1 1497 155 38 52 chr17 71723900 71724191 -13714289 - AluJo SINE Alu -25 287 1 324 0 0 0 chr17 71724387 71724423 -13714057 + (TG)n Simple_repeat Simple_repeat 2 37 0 198 118 0 0 chr17 71724476 71724510 -13713970 + (A)n Simple_repeat Simple_repeat 1 34 0 2205 164 55 9 chr17 71724756 71725196 -13713284 + MLT1C LTR MaLR 1 460 -7 233 265 86 68 chr17 71725205 71725322 -13713158 + L2 LINE L2 3188 3306 -7 181 114 0 45 chr17 71725892 71725936 -13712544 + (TTTTTA)n Simple_repeat Simple_repeat 6 47 0 235 232 18 0 chr17 71726886 71726942 -13711538 + L2 LINE L2 3216 3272 0 * 513 331 56 0 chr17 71726920 71727098 -13711382 - MIR SINE MIR -10 252 65 346 170 181 0 chr17 71727178 71727272 -13711208 + FLAM_A SINE Alu 1 111 -22 2284 102 0 0 chr17 71727742 71728046 -13710434 + AluSg SINE Alu 1 304 -6 566 291 76 5 chr17 71728750 71728960 -13709520 + MIR SINE MIR 13 237 -25 487 138 0 0 chr17 71729405 71729485 -13708995 - MADE1 DNA Mariner 0 80 1 1437 174 23 58 chr17 71729872 71730170 -13708310 - MER58B DNA MER1_type -2080 340 53 2108 92 0 11 chr17 71730170 71730479 -13708001 + AluSc SINE Alu 1 306 0 1437 174 23 58 chr17 71730479 71730524 -13707956 - MER58B DNA MER1_type -2367 53 8 305 288 54 9 chr17 71730548 71730659 -13707821 + MIR SINE MIR 58 173 -89 2359 114 0 0 chr17 71730921 71731229 -13707251 + AluSx SINE Alu 1 308 -4 2482 63 0 16 chr17 71731511 71731827 -13706653 + AluY SINE Alu 1 311 0 455 247 145 18 chr17 71732647 71732813 -13705667 + MIR3 SINE MIR 9 195 -13 2033 114 57 0 chr17 71733425 71733706 -13704774 - AluSx SINE Alu -15 297 1 681 274 160 17 chr17 71733953 71734421 -13704059 + L1ME4a LINE L1 5514 6048 -73 192 125 0 0 chr17 71735538 71735570 -13702910 + (TCCC)n Simple_repeat Simple_repeat 2 33 0 284 211 14 0 chr17 71736718 71736789 -13701691 + (CATA)n Simple_repeat Simple_repeat 1 72 0 2255 66 30 16 chr17 71739046 71739369 -13699111 - AluSg SINE Alu 0 310 1 244 222 0 83 chr17 71739720 71739792 -13698688 - L2 LINE L2 0 3313 3248 2099 135 6 3 chr17 71741552 71741863 -13696617 - AluSx SINE Alu 0 312 1 1042 132 48 48 chr17 71741886 71742056 -13696424 - AluSg/x SINE Alu -3 307 135 1703 144 7 25 chr17 71742056 71742341 -13696139 - AluJo SINE Alu -12 300 21 1042 132 48 48 chr17 71742341 71742359 -13696121 - AluSg/x SINE Alu -174 136 119 2076 108 56 0 chr17 71742592 71742879 -13695601 - AluSx SINE Alu -9 303 1 1011 183 27 27 chr17 71743236 71743455 -13695025 + MER20 DNA MER1_type 1 219 0 2112 125 7 0 chr17 71743485 71743782 -13694698 - AluSq SINE Alu -14 299 1 584 286 68 6 chr17 71743854 71744015 -13694465 + MIR3 SINE MIR 32 202 -6 2380 83 0 3 chr17 71744175 71744476 -13694004 + AluY SINE Alu 1 300 -11 244 325 166 0 chr17 71745268 71745431 -13693049 + L2 LINE L2 3071 3260 -12 2319 90 3 7 chr17 71745566 71745866 -13692614 - AluSc SINE Alu -10 299 1 1575 162 63 3 chr17 71746445 71746747 -13691733 + MER2 DNA MER2_type 1 320 -25 228 86 0 0 chr17 71746755 71746790 -13691690 + (TA)n Simple_repeat Simple_repeat 2 36 0 370 225 45 0 chr17 71746794 71746883 -13691597 + L1MC4 LINE L1 6614 6706 -1336 252 130 0 0 chr17 71746886 71746932 -13691548 + (TA)n Simple_repeat Simple_repeat 2 47 0 2130 118 23 0 chr17 71747524 71747829 -13690651 - AluSx SINE Alu 0 312 1 801 208 17 22 chr17 71747829 71747996 -13690484 + MER58A DNA MER1_type 57 224 0 923 132 0 22 chr17 71748092 71748228 -13690252 + FLAM_C SINE Alu 1 133 0 31 0 0 0 chr17 71748230 71748261 -13690219 + AT_rich Low_complexity Low_complexity 1 31 0 1965 155 0 43 chr17 71749582 71749905 -13688575 - AluJb SINE Alu -3 309 1 2162 106 14 0 chr17 71750660 71750953 -13687527 + AluSg SINE Alu 1 297 -13 14201 131 10 53 chr17 71751044 71751260 -13687220 - Tigger1 DNA MER2_type 0 2418 2194 2171 121 0 3 chr17 71751260 71751558 -13686922 - AluSx SINE Alu -15 297 1 894 193 0 19 chr17 71751559 71751720 -13686760 - FRAM SINE Alu -8 158 1 14201 131 10 53 chr17 71751720 71752785 -13685695 - Tigger1 DNA MER2_type -224 2194 1085 288 0 0 0 chr17 71752785 71752817 -13685663 + (TC)n Simple_repeat Simple_repeat 1 32 0 14201 131 10 53 chr17 71752817 71752835 -13685645 - Tigger1 DNA MER2_type -1333 1085 1068 1461 150 24 40 chr17 71752835 71753082 -13685398 - AluJb SINE Alu -69 243 1 14201 131 10 53 chr17 71753082 71753621 -13684859 - Tigger1 DNA MER2_type -1350 1068 507 2165 122 0 10 chr17 71753621 71753924 -13684556 - AluSx SINE Alu -1 311 12 14201 131 10 53 chr17 71753924 71754118 -13684362 - Tigger1 DNA MER2_type -1911 507 306 2240 117 0 0 chr17 71754118 71754426 -13684054 - AluSq SINE Alu -5 308 1 14201 131 10 53 chr17 71754426 71754914 -13683566 - Tigger1 DNA MER2_type -2112 306 1 2188 118 0 0 chr17 71755172 71755490 -13682990 + AluSg SINE Alu 1 318 0 1120 146 0 0 chr17 71756196 71756388 -13682092 + L1MA6 LINE L1 6107 6298 -2 1949 148 7 0 chr17 71756423 71756720 -13681760 + AluSx SINE Alu 1 299 -13 835 261 18 9 chr17 71757450 71757676 -13680804 + MIR SINE MIR 13 240 -22 2278 98 0 3 chr17 71757844 71758149 -13680331 - AluSx SINE Alu -7 305 2 2079 108 7 0 chr17 71758522 71758808 -13679672 + AluSx SINE Alu 1 288 -24 301 305 0 0 chr17 71758840 71758922 -13679558 + L1MC4 LINE L1 6614 6695 -1347 244 156 0 0 chr17 71758925 71758970 -13679510 - LTR66 LTR ERVL -172 438 394 351 0 0 0 chr17 71758988 71759027 -13679453 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2047 110 39 3 chr17 71759142 71759424 -13679056 - AluSq SINE Alu -15 298 7 702 191 0 8 chr17 71759552 71759683 -13678797 - FLAM_A SINE Alu -3 130 1 22 0 0 0 chr17 71759770 71759792 -13678688 + AT_rich Low_complexity Low_complexity 1 22 0 2239 95 0 3 chr17 71760351 71760645 -13677835 - AluSg SINE Alu -17 293 1 180 308 39 39 chr17 71760674 71760778 -13677702 + L3 LINE CR1 1341 1444 -133 2351 85 0 3 chr17 71760794 71761110 -13677370 + L1PB1 LINE L1 5835 6149 -2 2028 135 0 0 chr17 71762482 71762771 -13675709 + AluSq SINE Alu 1 289 -24 24 0 0 0 chr17 71762771 71762795 -13675685 + AT_rich Low_complexity Low_complexity 1 24 0 2554 66 0 0 chr17 71762955 71763258 -13675222 + AluSx SINE Alu 1 303 -9 228 238 0 0 chr17 71763419 71763482 -13674998 + (TTCA)n Simple_repeat Simple_repeat 2 64 0 2280 110 0 10 chr17 71763527 71763828 -13674652 + AluSx SINE Alu 3 300 -12 3939 160 21 11 chr17 71764106 71764849 -13673631 + L1MB2 LINE L1 5419 6169 -2 2277 92 0 3 chr17 71764905 71765197 -13673283 - AluSc SINE Alu -18 291 1 444 217 0 4 chr17 71765457 71765616 -13672864 - MER20 DNA MER1_type 0 219 3 317 262 97 10 chr17 71765633 71765736 -13672744 - MER94 DNA DNA -20 114 3 1035 249 155 75 chr17 71765741 71765860 -13672620 + L2 LINE L2 2403 2511 -802 2397 90 0 3 chr17 71765860 71766172 -13672308 - AluY SINE Alu 0 311 1 1035 249 155 75 chr17 71766172 71766492 -13671988 + L2 LINE L2 2511 2804 -509 2198 97 23 0 chr17 71766492 71766791 -13671689 - AluSg SINE Alu -4 306 1 1035 249 155 75 chr17 71766791 71767190 -13671290 + L2 LINE L2 2804 3310 -3 295 339 46 46 chr17 71767199 71767329 -13671151 - L2 LINE L2 -19 3294 3165 2141 114 0 43 chr17 71767823 71768147 -13670333 - AluSx SINE Alu -2 310 1 1883 144 13 23 chr17 71768316 71768615 -13669865 + AluSp SINE Alu 3 298 -15 1136 136 0 11 chr17 71768615 71768791 -13669689 + AluSc SINE Alu 132 305 -4 1245 148 5 38 chr17 71768907 71769117 -13669363 - AluJo SINE Alu -109 203 1 569 129 12 0 chr17 71769154 71769239 -13669241 + FLAM_A SINE Alu 36 121 -21 198 0 0 0 chr17 71769926 71769948 -13668532 + (TA)n Simple_repeat Simple_repeat 2 23 0 1636 149 102 4 chr17 71770017 71770292 -13668188 - AluJb SINE Alu -2 310 9 1689 128 0 35 chr17 71770540 71770798 -13667682 + AluSx SINE Alu 1 249 -63 2270 76 7 0 chr17 71770968 71771258 -13667222 - AluY SINE Alu -19 292 1 450 36 0 0 chr17 71771430 71771486 -13666994 + (CA)n Simple_repeat Simple_repeat 2 57 0 1520 209 110 5 chr17 71771513 71771887 -13666593 - MLT2C2 LTR ERVL -51 413 1 814 211 88 16 chr17 71771910 71772104 -13666376 + MLT2C2 LTR ERVL 210 417 -47 425 156 167 0 chr17 71772192 71772282 -13666198 - MER20 DNA MER1_type -90 129 25 594 224 19 9 chr17 71772300 71772602 -13665878 - L1ME LINE L1 -710 5460 5100 1089 230 76 5 chr17 71772705 71773088 -13665392 + L1M4 LINE L1 4136 4545 -1601 1996 148 13 0 chr17 71773186 71773489 -13664991 - AluJb SINE Alu -5 307 1 276 295 74 16 chr17 71774810 71774932 -13663548 - MIR SINE MIR -61 201 73 24 53 0 0 chr17 71775236 71775274 -13663206 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr17 71775932 71775979 -13662501 + AT_rich Low_complexity Low_complexity 1 47 0 910 159 12 12 chr17 71776321 71776491 -13661989 - L1PB3 LINE L1 0 6154 5985 873 106 23 15 chr17 71776566 71776733 -13661747 - FLAM_C SINE Alu 0 168 1 24 0 0 0 chr17 71777392 71777416 -13661064 + AT_rich Low_complexity Low_complexity 1 24 0 3271 159 24 5 chr17 71777865 71778417 -13660063 - MER68 LTR ERV1 0 562 1 521 276 33 28 chr17 71778720 71778901 -13659579 + MIR SINE MIR 6 187 -75 21 0 0 0 chr17 71779843 71779864 -13658616 + AT_rich Low_complexity Low_complexity 1 21 0 993 281 4 35 chr17 71780101 71780361 -13658119 - MIR SINE MIR -10 252 1 1507 212 51 16 chr17 71780399 71780772 -13657708 + Charlie1b DNA MER1_type 1 386 -137 242 161 49 62 chr17 71780891 71780972 -13657508 + Charlie1b DNA MER1_type 411 490 -33 1007 178 5 35 chr17 71780973 71781170 -13657310 - AluJo SINE Alu -46 266 76 29 28 0 0 chr17 71781427 71781463 -13657017 + AT_rich Low_complexity Low_complexity 1 36 0 1077 321 138 36 chr17 71781476 71782042 -13656438 - L2 LINE L2 -140 3173 2666 1991 156 10 0 chr17 71782042 71782344 -13656136 + AluJb SINE Alu 1 305 -7 1077 321 138 36 chr17 71782344 71782533 -13655947 - L2 LINE L2 -647 2666 2498 2141 93 26 13 chr17 71782533 71782835 -13655645 - AluSx SINE Alu -6 306 1 1077 321 138 36 chr17 71782835 71783308 -13655172 - L2 LINE L2 -815 2498 1812 31 68 0 0 chr17 71783997 71784056 -13654424 + AT_rich Low_complexity Low_complexity 1 59 0 29 0 0 0 chr17 71784250 71784279 -13654201 + AT_rich Low_complexity Low_complexity 1 29 0 12908 25 3 0 chr17 71784279 71786571 -13651909 - L1PA3 LINE L1 -1 6154 3857 22 35 0 0 chr17 71786631 71786660 -13651820 + AT_rich Low_complexity Low_complexity 1 29 0 748 228 218 3 chr17 71787054 71787352 -13651128 - L1ME3A LINE L1 -227 5943 5582 262 64 0 128 chr17 71787976 71788023 -13650457 - LTR23 LTR ERV1 -77 360 320 2896 57 8 13 chr17 71788507 71788891 -13649589 - L1PA7 LINE L1 -2 6152 5771 2156 100 0 7 chr17 71788937 71789218 -13649262 + AluSc SINE Alu 1 279 -30 1309 218 55 30 chr17 71789256 71789618 -13648862 - MLT1A2 LTR MaLR -3 371 1 407 227 92 7 chr17 71789624 71789765 -13648715 - MER103 DNA DNA -1 165 13 21 36 0 0 chr17 71789856 71789884 -13648596 + AT_rich Low_complexity Low_complexity 1 28 0 2111 139 0 0 chr17 71790181 71790483 -13647997 + AluSx SINE Alu 1 302 -10 221 171 0 0 chr17 71790711 71790752 -13647728 + T-rich Low_complexity Low_complexity 1 41 0 1792 171 0 16 chr17 71790799 71791103 -13647377 + AluJb SINE Alu 1 299 -13 2200 95 0 0 chr17 71791567 71791906 -13646574 + AluSx SINE Alu 1 339 0 267 103 0 0 chr17 71793664 71793703 -13644777 + (CAG)n Simple_repeat Simple_repeat 2 40 0 641 292 35 40 chr17 71793710 71793936 -13644544 - MIR SINE MIR -19 243 19 21 82 0 0 chr17 71794370 71794419 -13644061 + AT_rich Low_complexity Low_complexity 1 49 0 24 53 0 0 chr17 71794983 71795021 -13643459 + AT_rich Low_complexity Low_complexity 1 38 0 2985 179 18 55 chr17 71795241 71795913 -13642567 - L1MB8 LINE L1 -6 6172 5526 181 283 0 57 chr17 71797042 71797095 -13641385 - MIR SINE MIR -97 111 62 244 291 111 42 chr17 71797546 71797735 -13640745 - MIR SINE MIR -2 260 59 24 32 0 0 chr17 71798134 71798165 -13640315 + AT_rich Low_complexity Low_complexity 1 31 0 2208 73 11 14 chr17 71798168 71798492 -13639988 + AluSp SINE Alu 1 323 0 22 56 0 0 chr17 71798544 71798580 -13639900 + AT_rich Low_complexity Low_complexity 1 36 0 42 0 0 49 chr17 71798709 71798770 -13639710 + AT_rich Low_complexity Low_complexity 1 58 0 871 10 0 0 chr17 71798770 71798868 -13639612 - L1PA2 LINE L1 -8 6147 6050 2928 184 101 8 chr17 71798870 71799527 -13638953 - L1MD1 LINE L1 -1 6241 5524 5421 164 15 15 chr17 71800977 71801347 -13637133 + L1PA16 LINE L1 4325 4693 -1473 2105 121 0 7 chr17 71801347 71801645 -13636835 + AluSc SINE Alu 1 296 -13 5421 164 15 15 chr17 71801645 71803109 -13635371 + L1PA16 LINE L1 4693 6157 -9 22 35 0 0 chr17 71803495 71803524 -13634956 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr17 71804228 71804266 -13634214 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr17 71805368 71805415 -13633065 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr17 71805487 71805507 -13632973 + (CAA)n Simple_repeat Simple_repeat 2 21 0 939 180 0 45 chr17 71805665 71805865 -13632615 - L1MB8 LINE L1 -72 6106 5916 1119 168 122 16 chr17 71806136 71806407 -13632073 - L1MB8 LINE L1 -440 5743 5474 2376 165 26 65 chr17 71806647 71807217 -13631263 - L1PA16 LINE L1 -19 6147 5600 1329 104 85 30 chr17 71807966 71808167 -13630313 - AluSg/x SINE Alu -7 305 94 2392 68 0 10 chr17 71808309 71808617 -13629863 - AluY SINE Alu -6 305 1 1755 217 65 11 chr17 71808859 71809302 -13629178 + MLT1C LTR MaLR 1 467 0 2064 129 37 0 chr17 71809585 71809793 -13628687 + AluSx SINE Alu 1 225 -87 189 0 0 0 chr17 71809793 71809814 -13628666 + (GGA)n Simple_repeat Simple_repeat 1 21 0 2064 129 37 0 chr17 71809814 71809900 -13628580 + AluSx SINE Alu 225 306 -6 804 243 109 7 chr17 71809929 71810233 -13628247 + L1ME LINE L1 270 604 -5466 283 309 36 18 chr17 71810236 71810459 -13628021 + L1M4 LINE L1 4407 4633 -1513 720 157 167 91 chr17 71810560 71810758 -13627722 + MER20 DNA MER1_type 1 213 -6 269 260 52 0 chr17 71810778 71810855 -13627625 + L1M4 LINE L1 4757 4837 -1309 1891 90 38 62 chr17 71810896 71811223 -13627257 + AluSx SINE Alu 2 321 0 351 253 111 84 chr17 71811382 71811572 -13626908 - L1ME3A LINE L1 -16 6154 5960 2012 158 0 0 chr17 71811573 71811884 -13626596 - AluSx SINE Alu -1 311 1 559 264 41 48 chr17 71811959 71812099 -13626381 - L1ME3A LINE L1 -221 5949 5810 2081 142 3 0 chr17 71812099 71812402 -13626078 - AluSx SINE Alu -7 305 2 559 264 41 48 chr17 71812402 71812530 -13625950 - L1ME3A LINE L1 -360 5810 5683 658 251 59 47 chr17 71812573 71812796 -13625684 - L1MEd LINE L1 -3426 2703 2471 2261 99 3 31 chr17 71812796 71812832 -13625648 - AluSp SINE Alu 0 313 278 210 37 0 0 chr17 71812832 71812859 -13625621 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2261 99 3 31 chr17 71812859 71813144 -13625336 - AluSp SINE Alu -35 278 1 658 251 59 47 chr17 71813144 71813326 -13625154 - L1MEd LINE L1 -3658 2471 2293 545 246 101 39 chr17 71813368 71813706 -13624774 - L1MEd LINE L1 -4866 1253 895 320 378 42 25 chr17 71813826 71814067 -13624413 - L1MEd LINE L1 -5340 779 535 2374 96 0 3 chr17 71814146 71814449 -13624031 + AluSc SINE Alu 3 304 -5 27 29 0 0 chr17 71814716 71814750 -13623730 + AT_rich Low_complexity Low_complexity 1 34 0 1921 133 6 37 chr17 71814806 71815128 -13623352 + AluJb SINE Alu 1 312 0 227 56 56 0 chr17 71815160 71815196 -13623284 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 444 174 0 0 chr17 71815196 71815265 -13623215 - AluJ/FRAM SINE Alu -30 282 214 231 88 0 0 chr17 71815300 71815334 -13623146 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 682 227 0 0 chr17 71815336 71815464 -13623016 - FLAM_A SINE Alu -5 128 1 21 0 0 0 chr17 71815503 71815524 -13622956 + AT_rich Low_complexity Low_complexity 1 21 0 2402 66 0 17 chr17 71815672 71815973 -13622507 + AluY SINE Alu 1 296 -15 665 231 147 80 chr17 71816005 71816064 -13622416 - HAL1b LINE L1 -181 1167 1113 2139 111 7 10 chr17 71816064 71816362 -13622118 + AluSx SINE Alu 1 297 -15 665 231 147 80 chr17 71816362 71816498 -13621982 - HAL1b LINE L1 -235 1113 988 2546 41 0 29 chr17 71816498 71816812 -13621668 - AluY SINE Alu -5 306 2 665 231 147 80 chr17 71816812 71817274 -13621206 - HAL1b LINE L1 -360 988 465 522 257 197 13 chr17 71817277 71817429 -13621051 - MER5A DNA MER1_type -1 188 9 533 275 69 37 chr17 71817436 71817785 -13620695 - HAL1b LINE L1 -877 471 112 899 136 0 0 chr17 71817803 71817935 -13620545 - FLAM_C SINE Alu -1 132 1 636 274 144 60 chr17 71818716 71819299 -13619181 + L2 LINE L2 2690 3305 -8 4117 118 61 37 chr17 71819360 71819560 -13618920 + MER4E LTR ERV1 24 218 -561 2124 76 0 38 chr17 71819560 71819849 -13618631 + AluSg SINE Alu 1 278 -32 1059 75 12 6 chr17 71819851 71820011 -13618469 + (GAA)n Simple_repeat Simple_repeat 2 162 0 4117 118 61 37 chr17 71820011 71820353 -13618127 + MER4E LTR ERV1 218 594 -185 2334 92 0 3 chr17 71820353 71820678 -13617802 - AluSp SINE Alu 0 313 1 4117 118 61 37 chr17 71820678 71820869 -13617611 + MER4E LTR ERV1 594 779 0 1679 166 25 7 chr17 71821226 71821534 -13616946 - AluJb SINE Alu 0 313 1 533 219 0 42 chr17 71821969 71822170 -13616310 + AluJb SINE Alu 198 393 0 2113 141 3 3 chr17 71822341 71822640 -13615840 + AluJb SINE Alu 1 299 -13 1207 199 72 8 chr17 71822677 71823039 -13615441 - LTR37A LTR ERV1 -3 423 39 2595 147 40 11 chr17 71823098 71823594 -13614886 + MER41B LTR ERV1 108 474 -12 949 217 0 53 chr17 71823654 71823712 -13614768 + AluJb SINE Alu 86 146 -166 2302 82 3 10 chr17 71823712 71824016 -13614464 + AluSp SINE Alu 1 302 -11 949 217 0 53 chr17 71824016 71824164 -13614316 + AluJb SINE Alu 146 281 -31 1047 124 3 27 chr17 71824170 71824466 -13614014 + (GAAA)n Simple_repeat Simple_repeat 2 290 0 1855 142 33 13 chr17 71824555 71824858 -13613622 + AluSx SINE Alu 1 309 -3 282 299 109 3 chr17 71824932 71825060 -13613420 - MIR3 SINE MIR -39 169 31 2436 84 0 0 chr17 71825254 71825553 -13612927 + AluSx SINE Alu 5 303 -9 2335 88 3 0 chr17 71825871 71826168 -13612312 - AluSp SINE Alu -15 298 1 1160 137 0 12 chr17 71826240 71826408 -13612072 + AluSg/x SINE Alu 132 297 -13 337 182 59 24 chr17 71826631 71826801 -13611679 + (TATAA)n Simple_repeat Simple_repeat 2 177 0 1460 178 17 31 chr17 71827392 71827679 -13610801 + AluJb SINE Alu 1 283 -29 1420 190 40 45 chr17 71827742 71828096 -13610384 - MLT1A1 LTR MaLR 0 365 13 1285 220 27 20 chr17 71828112 71828408 -13610072 + L2 LINE L2 2488 2785 -529 2029 138 7 0 chr17 71828408 71828705 -13609775 + AluSx SINE Alu 1 299 -13 504 0 0 0 chr17 71828705 71828761 -13609719 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 270 136 0 0 chr17 71828762 71828806 -13609674 + (GAAAA)n Simple_repeat Simple_repeat 1 44 0 349 251 55 70 chr17 71828834 71829033 -13609447 - LTR16C LTR ERVL 0 491 296 657 299 30 10 chr17 71829312 71829557 -13608923 + L2 LINE L2 2796 3040 -273 5558 121 21 44 chr17 71829561 71829717 -13608763 - L1MA4A LINE L1 -15 6288 6130 2048 147 0 6 chr17 71829717 71830029 -13608451 - AluSx SINE Alu -2 310 1 5558 121 21 44 chr17 71830029 71830710 -13607770 - L1MA4A LINE L1 -173 6130 5483 2395 87 0 13 chr17 71830710 71831019 -13607461 + AluSp SINE Alu 1 305 -8 5558 121 21 44 chr17 71831019 71831427 -13607053 - L1MA4A LINE L1 -820 5483 5067 774 197 133 123 chr17 71831612 71832003 -13606477 - MSTD LTR MaLR -1 395 1 472 241 176 21 chr17 71832003 71832105 -13606375 + L2 LINE L2 3098 3183 -130 329 0 0 24 chr17 71832105 71832147 -13606333 + (TG)n Simple_repeat Simple_repeat 2 42 0 472 241 176 21 chr17 71832147 71832231 -13606249 + L2 LINE L2 3183 3313 0 1625 173 4 22 chr17 71833806 71834083 -13604397 - AluSx SINE Alu -40 272 1 348 289 150 28 chr17 71834092 71834272 -13604208 - MIR SINE MIR -54 208 7 21 0 0 0 chr17 71834286 71834307 -13604173 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr17 71834432 71834463 -13604017 + (TG)n Simple_repeat Simple_repeat 1 31 0 940 139 13 7 chr17 71834488 71834639 -13603841 - AluJo SINE Alu -41 271 120 2499 82 0 0 chr17 71834943 71835247 -13603233 + AluSx SINE Alu 1 304 -8 1747 157 35 3 chr17 71835575 71835861 -13602619 + AluJo SINE Alu 1 295 -17 1533 144 9 0 chr17 71835958 71836187 -13602293 + AluJb SINE Alu 82 312 0 709 238 56 32 chr17 71837199 71837451 -13601029 - LTR37A LTR ERV1 -122 304 47 540 241 29 17 chr17 71837552 71837726 -13600754 - Charlie1 DNA MER1_type -14 2747 2572 441 208 55 30 chr17 71837743 71838162 -13600318 - MER34B LTR ERV1 -3 562 1 1296 204 70 48 chr17 71838252 71838472 -13600008 - MLT1A1 LTR MaLR 0 365 132 1613 166 56 3 chr17 71838472 71838756 -13599724 - AluSx SINE Alu -13 299 1 1296 204 70 48 chr17 71838756 71838892 -13599588 - MLT1A1 LTR MaLR -233 132 1 309 109 0 0 chr17 71839038 71839084 -13599396 - Alu SINE Alu -10 292 247 2072 151 0 0 chr17 71839896 71840208 -13598272 + AluSx SINE Alu 1 312 0 2125 70 3 79 chr17 71840367 71840682 -13597798 - AluSg SINE Alu -19 291 1 346 250 0 34 chr17 71841026 71841114 -13597366 + L2 LINE L2 3229 3313 0 822 236 84 0 chr17 71841298 71841414 -13597066 + AluJ SINE Alu 1 139 -173 270 0 0 0 chr17 71841414 71841444 -13597036 + (CA)n Simple_repeat Simple_repeat 1 30 0 822 236 84 0 chr17 71841444 71841505 -13596975 + AluJ SINE Alu 139 193 -119 4169 148 13 3 chr17 71841506 71842202 -13596278 - MER50 LTR ERV1 -23 711 9 637 165 0 0 chr17 71842202 71842305 -13596175 + AluJ SINE Alu 182 284 -28 423 0 0 0 chr17 71842306 71842353 -13596127 + (CA)n Simple_repeat Simple_repeat 2 48 0 346 121 0 17 chr17 71842402 71842458 -13596022 + MER4D LTR ERV1 1 55 -817 1005 81 47 0 chr17 71842458 71842606 -13595874 + LTR8A LTR ERV1 1 155 -572 1065 132 121 5 chr17 71842606 71842796 -13595684 - AluJb SINE Alu -14 298 87 732 145 7 86 chr17 71842799 71842951 -13595529 + LTR8A LTR ERV1 587 726 -1 2356 108 0 0 chr17 71842984 71843290 -13595190 + AluSx SINE Alu 1 306 -6 1933 108 63 11 chr17 71843300 71843586 -13594894 + AluSg SINE Alu 1 301 -9 210 71 0 0 chr17 71843646 71843674 -13594806 + (TCCCC)n Simple_repeat Simple_repeat 4 31 0 336 102 0 0 chr17 71843704 71843753 -13594727 + (TCTCC)n Simple_repeat Simple_repeat 1 49 0 2198 123 0 3 chr17 71843753 71844055 -13594425 - AluSx SINE Alu -11 301 1 219 69 0 0 chr17 71844417 71844446 -13594034 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 322 241 28 19 chr17 71844632 71844740 -13593740 - L1ME4a LINE L1 -69 6052 5944 2417 109 0 0 chr17 71844799 71845111 -13593369 - AluSx SINE Alu 0 312 1 262 143 0 0 chr17 71845417 71845466 -13593014 - L1ME LINE L1 -469 5652 5604 1103 202 87 55 chr17 71845466 71845813 -13592667 + MLT1A2 LTR MaLR 9 366 -8 2117 100 10 0 chr17 71845826 71846116 -13592364 - AluSx SINE Alu -19 293 1 929 135 15 0 chr17 71846116 71846249 -13592231 - AluSq/x SINE Alu -177 135 1 353 325 8 0 chr17 71846253 71846370 -13592110 - L1ME LINE L1 -512 5609 5492 3606 98 59 2 chr17 71847832 71848355 -13590125 + MER41A LTR ERV1 2 554 0 1982 156 3 0 chr17 71848935 71849236 -13589244 + AluSq SINE Alu 3 304 -9 1651 116 4 0 chr17 71849237 71849470 -13589010 - AluSc SINE Alu -75 234 1 31 26 0 0 chr17 71850087 71850125 -13588355 + AT_rich Low_complexity Low_complexity 1 38 0 235 367 16 80 chr17 71850709 71850897 -13587583 - MER5A DNA MER1_type -2 187 1 261 261 139 43 chr17 71850932 71851047 -13587433 + L2 LINE L2 3180 3305 -8 322 308 143 81 chr17 71852547 71852853 -13585627 - L1MDa LINE L1 -4445 1684 1345 1553 154 43 21 chr17 71852853 71853132 -13585348 - AluJb SINE Alu -27 285 1 322 308 143 81 chr17 71853132 71853231 -13585249 - L1MDa LINE L1 -4784 1345 1254 522 282 82 33 chr17 71853240 71853545 -13584935 - L1MDa LINE L1 -4862 1257 938 346 343 20 0 chr17 71853545 71853647 -13584833 + L2 LINE L2 3193 3296 -17 233 200 33 0 chr17 71853685 71853745 -13584735 + T-rich Low_complexity Low_complexity 1 62 0 237 33 0 0 chr17 71853782 71853812 -13584668 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 707 172 9 0 chr17 71853814 71853930 -13584550 - FLAM_C SINE Alu -24 119 3 322 237 35 41 chr17 71853970 71854139 -13584341 - L1MDa LINE L1 -5350 769 602 328 402 30 6 chr17 71854374 71854538 -13583942 - L1MDa LINE L1 -5918 201 34 24 32 0 0 chr17 71855528 71855559 -13582921 + AT_rich Low_complexity Low_complexity 1 31 0 2282 93 3 0 chr17 71855838 71856138 -13582342 - AluSp SINE Alu -11 302 2 510 338 77 65 chr17 71856146 71856469 -13582011 + L2 LINE L2 2945 3271 -1 282 316 35 26 chr17 71856692 71856806 -13581674 + MIR SINE MIR 148 262 0 1624 176 72 94 chr17 71857103 71857212 -13581268 - MLT1D LTR MaLR 0 505 395 1737 164 4 4 chr17 71857212 71857513 -13580967 + AluJo SINE Alu 5 305 0 1624 176 72 94 chr17 71857513 71857913 -13580567 - MLT1D LTR MaLR -110 395 6 949 294 240 8 chr17 71858006 71858519 -13579961 - L3 LINE CR1 -634 943 312 231 152 0 0 chr17 71859352 71859398 -13579082 + (TAA)n Simple_repeat Simple_repeat 1 46 0 1869 144 73 17 chr17 71860459 71860814 -13577666 - THE1C LTR MaLR 0 375 1 1842 174 3 3 chr17 71861040 71861350 -13577130 + AluJb SINE Alu 3 312 0 3544 120 9 4 chr17 71861915 71862439 -13576041 + MER1A DNA MER1_type 1 527 0 316 324 82 68 chr17 71863256 71863608 -13574872 + L1M2 LINE L1 559 915 -5934 * 359 322 120 65 chr17 71863292 71863948 -13574532 - L1M2 LINE L1 -5458 1391 584 453 274 62 43 chr17 71864387 71864595 -13573885 - MIR SINE MIR -30 232 21 851 158 137 26 chr17 71864843 71865033 -13573447 - AluJo SINE Alu -20 292 82 1470 159 67 21 chr17 71865353 71865636 -13572844 - AluJb SINE Alu -16 296 1 436 227 26 58 chr17 71865961 71866115 -13572365 - L2 LINE L2 -1864 1450 1302 1587 185 64 27 chr17 71866567 71866896 -13571584 - MER58B DNA MER1_type 0 341 1 1114 220 11 88 chr17 71867141 71867551 -13570929 - LTR24B LTR ERV1 0 532 163 24 32 0 0 chr17 71867874 71867905 -13570575 + AT_rich Low_complexity Low_complexity 1 31 0 2096 121 17 0 chr17 71868289 71868587 -13569893 - AluSc SINE Alu -6 303 1 360 316 79 0 chr17 71870401 71870540 -13567940 - HAL1 LINE L1 -1398 1109 960 981 284 24 0 chr17 71870545 71870795 -13567685 - MIR SINE MIR 0 262 7 1964 116 65 0 chr17 71872284 71872561 -13565919 + AluSq SINE Alu 3 297 -16 1802 226 101 22 chr17 71873034 71873253 -13565227 - L1MB5 LINE L1 -132 6042 5842 2105 127 10 19 chr17 71873253 71873560 -13564920 - AluSx SINE Alu -8 304 1 1802 226 101 22 chr17 71873560 71873835 -13564645 - L1MB5 LINE L1 -332 5842 5509 1703 224 47 67 chr17 71873828 71874158 -13564322 - L1MDb LINE L1 -4719 1687 1352 * 2041 135 20 0 chr17 71874158 71874461 -13564019 - AluSx SINE Alu -1 311 3 1703 224 47 67 chr17 71874461 71874876 -13563604 - L1MDb LINE L1 -5054 1352 993 2273 99 0 0 chr17 71874876 71875170 -13563310 - AluSg SINE Alu -14 296 3 1703 224 47 67 chr17 71875170 71875389 -13563091 - L1MDb LINE L1 -5413 993 771 30 0 0 0 chr17 71876444 71876474 -13562006 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr17 71876547 71876569 -13561911 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr17 71877705 71877734 -13560746 + AT_rich Low_complexity Low_complexity 1 29 0 773 206 0 65 chr17 71877926 71878096 -13560384 + FRAM SINE Alu 1 159 -7 580 143 10 31 chr17 71878265 71878363 -13560117 - FLAM_C SINE Alu -14 129 34 2150 112 3 13 chr17 71878883 71879196 -13559284 + AluSx SINE Alu 1 310 -2 303 331 107 39 chr17 71879415 71879457 -13559023 - MIR SINE MIR -2 260 222 1717 173 19 22 chr17 71879457 71879770 -13558710 - AluJb SINE Alu 0 312 1 303 331 107 39 chr17 71879770 71879905 -13558575 - MIR SINE MIR -40 222 71 224 318 127 17 chr17 71880031 71880204 -13558276 + L3b LINE CR1 1277 1468 -115 1166 216 48 24 chr17 71880237 71880529 -13557951 + AluJb SINE Alu 4 302 0 22 0 0 0 chr17 71880582 71880604 -13557876 + AT_rich Low_complexity Low_complexity 1 22 0 1748 192 10 0 chr17 71880810 71881112 -13557368 - AluJb SINE Alu -5 307 3 23 0 0 0 chr17 71881556 71881579 -13556901 + AT_rich Low_complexity Low_complexity 1 23 0 261 268 0 14 chr17 71882925 71882996 -13555484 + MIR SINE MIR 135 204 -58 34 42 0 0 chr17 71883955 71884003 -13554477 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr17 71884347 71884370 -13554110 + AT_rich Low_complexity Low_complexity 1 23 0 1763 183 0 3 chr17 71884798 71885087 -13553393 - AluJo SINE Alu -24 288 1 313 280 102 25 chr17 71885142 71885260 -13553220 + MIR3 SINE MIR 79 205 -3 1563 149 13 79 chr17 71886621 71886792 -13551688 - AluJb SINE Alu -18 294 152 705 82 0 0 chr17 71886792 71886889 -13551591 + (TA)n Simple_repeat Simple_repeat 1 97 0 1563 149 13 79 chr17 71886889 71887032 -13551448 - AluJb SINE Alu -160 152 1 1808 155 10 7 chr17 71887260 71887569 -13550911 + AluJb SINE Alu 3 312 0 23 0 0 0 chr17 71888049 71888072 -13550408 + AT_rich Low_complexity Low_complexity 1 23 0 353 343 90 22 chr17 71888724 71888902 -13549578 - MIR3 SINE MIR 0 208 19 23 0 0 0 chr17 71889229 71889252 -13549228 + AT_rich Low_complexity Low_complexity 1 23 0 197 208 10 115 chr17 71889832 71889928 -13548552 + L2 LINE L2 2437 2522 -792 783 221 10 53 chr17 71890002 71890210 -13548270 - MER3 DNA MER1_type 0 209 11 3454 126 34 0 chr17 71890229 71890737 -13547743 + MER1A DNA MER1_type 2 526 -1 5594 147 40 8 chr17 71890814 71891173 -13547307 - L1PB1 LINE L1 0 6151 5805 384 22 0 0 chr17 71891173 71891218 -13547262 + (TG)n Simple_repeat Simple_repeat 2 46 0 5594 147 40 8 chr17 71891218 71892098 -13546382 - L1PB1 LINE L1 -346 5805 4872 917 119 7 0 chr17 71892312 71892463 -13546017 + (TTCC)n Simple_repeat Simple_repeat 1 152 0 1859 163 0 3 chr17 71892482 71892771 -13545709 - AluJb SINE Alu -24 288 1 464 103 11 35 chr17 71893135 71893222 -13545258 - L1MA8 LINE L1 -5 6286 6202 2118 144 0 0 chr17 71893682 71893988 -13544492 - AluSx SINE Alu -3 309 4 212 149 21 0 chr17 71894276 71894323 -13544157 + A-rich Low_complexity Low_complexity 3 50 0 22 56 0 0 chr17 71894332 71894368 -13544112 + AT_rich Low_complexity Low_complexity 1 36 0 4325 152 24 7 chr17 71894740 71895477 -13543003 + Tigger2 DNA MER2_type 2 751 -1967 967 201 66 8 chr17 71895546 71895790 -13542690 + Tigger2 DNA MER2_type 2461 2718 0 23 33 0 0 chr17 71895839 71895869 -13542611 + AT_rich Low_complexity Low_complexity 1 30 0 2147 118 3 0 chr17 71896129 71896433 -13542047 - AluSx SINE Alu -7 305 1 411 167 0 0 chr17 71896648 71896714 -13541766 - MER20 DNA MER1_type -3 216 151 2143 188 53 28 chr17 71896824 71897607 -13540873 - L1P5 LINE L1 -623 5533 4732 190 220 11 11 chr17 71897686 71897777 -13540703 + (TA)n Simple_repeat Simple_repeat 1 91 0 216 304 29 0 chr17 71898787 71898856 -13539624 + MIR SINE MIR 82 152 -110 22 35 0 0 chr17 71898858 71898887 -13539593 + AT_rich Low_complexity Low_complexity 1 29 0 431 138 75 0 chr17 71899589 71899669 -13538811 - L1MB7 LINE L1 -19 6165 6080 574 276 138 61 chr17 71900273 71900816 -13537664 + MLT1K LTR MaLR 4 588 0 326 139 41 0 chr17 71900828 71900896 -13537584 - L1MA4 LINE L1 -185 6115 6041 861 150 7 7 chr17 71903261 71903414 -13535066 + LTR41 LTR ERVL 1 153 -620 284 203 25 59 chr17 71903792 71903910 -13534570 + LTR41 LTR ERVL 654 767 -6 1248 201 24 7 chr17 71904498 71904791 -13533689 + L1MCc LINE L1 19 316 -6107 3412 66 0 2 chr17 71904884 71905326 -13533154 + L1PA8 LINE L1 5714 6154 -18 465 66 0 0 chr17 71905326 71905387 -13533093 + (TA)n Simple_repeat Simple_repeat 2 62 0 675 237 69 74 chr17 71905824 71906174 -13532306 + L1MCc LINE L1 720 1067 -5356 213 159 0 0 chr17 71906787 71906831 -13531649 + (TG)n Simple_repeat Simple_repeat 1 44 0 288 0 0 0 chr17 71907060 71907092 -13531388 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 2147 102 0 0 chr17 71907092 71907375 -13531105 - AluSg SINE Alu -27 283 1 2019 114 7 7 chr17 71907666 71907956 -13530524 + AluSx SINE Alu 1 290 -22 303 71 0 0 chr17 71907956 71907998 -13530482 + (GA)n Simple_repeat Simple_repeat 1 42 0 312 343 44 7 chr17 71908338 71908475 -13530005 - L1MDa LINE L1 -2367 4173 4032 198 0 0 0 chr17 71908726 71908748 -13529732 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6676 75 7 0 chr17 71908748 71910186 -13528294 - L1PA8 LINE L1 -11 6161 4719 6545 125 22 1 chr17 71910187 71911455 -13527025 + L1PA8 LINE L1 3372 4744 -1402 429 258 46 46 chr17 71911537 71911754 -13526726 - L1MDa LINE L1 -2867 3673 3457 382 273 48 62 chr17 71911806 71912126 -13526354 + MLT1H LTR MaLR 8 363 -186 264 346 39 15 chr17 71912295 71912633 -13525847 - L1 LINE L1 -3311 3229 2884 301 259 109 54 chr17 71912668 71912815 -13525665 - L1 LINE L1 -3744 2796 2642 1937 61 0 0 chr17 71913222 71913475 -13525005 - AluY SINE Alu 0 305 53 1609 26 0 10 chr17 71915043 71915238 -13523242 - L1PA3 LINE L1 0 6155 5963 1753 226 95 20 chr17 71916726 71917359 -13521121 - L1MDa LINE L1 -3197 3343 2664 234 0 0 0 chr17 71917362 71917388 -13521092 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 125 0 0 chr17 71917458 71917498 -13520982 + (TG)n Simple_repeat Simple_repeat 1 40 0 717 211 8 8 chr17 71917498 71917631 -13520849 - FLAM_A SINE Alu 0 133 1 975 239 18 30 chr17 71917640 71918033 -13520447 - L1MDa LINE L1 -3892 2648 2261 3251 303 49 28 chr17 71918040 71919406 -13519074 + HERV16 LTR ERVL 1609 3003 -1993 615 45 82 26 chr17 71919417 71919759 -13518721 + (TA)n Simple_repeat Simple_repeat 1 361 0 33 0 0 0 chr17 71919759 71919792 -13518688 + AT_rich Low_complexity Low_complexity 1 33 0 663 76 52 23 chr17 71919792 71919964 -13518516 + (TATAA)n Simple_repeat Simple_repeat 1 177 0 262 202 61 0 chr17 71919964 71920063 -13518417 + (TA)n Simple_repeat Simple_repeat 1 105 0 490 148 0 0 chr17 71920063 71920144 -13518336 + THE1B-int LTR MaLR 1500 1580 0 2813 90 0 3 chr17 71920144 71920509 -13517971 + THE1B LTR MaLR 1 364 0 3365 119 0 17 chr17 71920509 71921039 -13517441 + L1PA16 LINE L1 5441 5961 -205 999 108 0 0 chr17 71921246 71921385 -13517095 + AluSp/q SINE Alu 175 313 0 213 227 40 13 chr17 71922131 71922206 -13516274 + MER5C DNA MER1_type 48 124 -200 288 173 213 0 chr17 71922231 71922306 -13516174 + MER5C DNA MER1_type 233 323 -1 2148 169 23 57 chr17 71922839 71922875 -13515605 - MLT2C2 LTR ERVL -2 462 426 643 39 39 24 chr17 71922875 71923002 -13515478 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 2148 169 23 57 chr17 71923002 71923443 -13515037 - MLT2C2 LTR ERVL -38 426 1 2119 93 0 0 chr17 71924741 71925032 -13513448 + AluSx SINE Alu 30 312 0 214 217 0 33 chr17 71925777 71925818 -13512662 + (TATG)n Simple_repeat Simple_repeat 3 43 -17 2743 16 0 0 chr17 71925818 71926126 -13512354 - AluYa5 SINE Alu -3 308 1 214 217 0 33 chr17 71926126 71926144 -13512336 + (TATG)n Simple_repeat Simple_repeat 43 60 0 30 27 0 0 chr17 71926274 71926311 -13512169 + AT_rich Low_complexity Low_complexity 1 37 0 2174 133 45 14 chr17 71926717 71927070 -13511410 - THE1B LTR MaLR 0 364 1 2909 183 33 5 chr17 71927110 71927721 -13510759 - L1MB8 LINE L1 -208 5970 5343 774 264 70 0 chr17 71927741 71928014 -13510466 - L1MB8 LINE L1 -1971 4175 3884 5379 105 7 26 chr17 71928036 71928904 -13509576 - L1PB1 LINE L1 0 6151 5301 2005 226 16 17 chr17 71928927 71929508 -13508972 - L1MB8 LINE L1 -2268 3878 3299 2041 122 3 3 chr17 71929516 71929810 -13508670 - AluSx SINE Alu -18 294 1 231 330 77 0 chr17 71930456 71930547 -13507933 - L2 LINE L2 -3118 196 99 2114 111 0 0 chr17 71930565 71930881 -13507599 - AluY SINE Alu 0 316 1 1554 179 32 25 chr17 71932306 71932480 -13506000 - AluJo SINE Alu -14 298 120 456 35 0 0 chr17 71932480 71932538 -13505942 + (TG)n Simple_repeat Simple_repeat 2 59 0 1554 179 32 25 chr17 71932538 71932642 -13505838 - AluJo SINE Alu -192 120 18 749 168 32 68 chr17 71933262 71933452 -13505028 + MER20 DNA MER1_type 35 217 -2 2113 70 81 0 chr17 71933760 71934032 -13504448 - AluSc SINE Alu -15 294 1 532 241 94 5 chr17 71934549 71934737 -13503743 - MLT1E2 LTR MaLR -298 326 137 3828 67 0 0 chr17 71935863 71936354 -13502126 - L1PA7 LINE L1 0 6154 5664 29 60 0 0 chr17 71936542 71936592 -13501888 + AT_rich Low_complexity Low_complexity 1 50 0 316 299 134 27 chr17 71937703 71937890 -13500590 + LTR33 LTR ERVL 314 520 -1 6196 40 5 1 chr17 71938954 71939762 -13498718 - L1P LINE L1 -3470 2676 1866 11938 31 24 0 chr17 71939762 71941936 -13496544 + L1PA4 LINE L1 3956 6154 -1 1452 133 54 103 chr17 71941947 71942337 -13496143 + L1MA9 LINE L1 5814 6184 -128 1428 95 63 50 chr17 71942649 71942870 -13495610 + AluSc SINE Alu 81 304 -5 564 230 16 32 chr17 71943235 71943422 -13495058 - MER20 DNA MER1_type -1 218 35 1731 181 3 7 chr17 71943732 71944041 -13494439 + AluJo SINE Alu 1 308 -4 22 0 0 0 chr17 71945534 71945556 -13492924 + AT_rich Low_complexity Low_complexity 1 22 0 2424 90 0 0 chr17 71946351 71946651 -13491829 + AluSc SINE Alu 1 300 -9 1826 100 79 7 chr17 71946697 71946977 -13491503 + AluSx SINE Alu 11 310 -2 975 164 49 76 chr17 71947707 71947932 -13490548 + MER20 DNA MER1_type 1 219 0 452 271 84 84 chr17 71948035 71948297 -13490183 - MIR SINE MIR 0 262 1 291 330 103 52 chr17 71948329 71948620 -13489860 - L2 LINE L2 -95 3218 2913 227 277 217 92 chr17 71948648 71948748 -13489732 - L2 LINE L2 -495 2819 2733 1992 113 3 14 chr17 71948748 71949071 -13489409 - AluSp SINE Alu 0 322 3 227 277 217 92 chr17 71949071 71949153 -13489327 - L2 LINE L2 -581 2733 2613 559 351 44 4 chr17 71950175 71950266 -13488214 - MIR SINE MIR 0 262 176 351 0 0 0 chr17 71950266 71950305 -13488175 + (CA)n Simple_repeat Simple_repeat 1 39 0 559 351 44 4 chr17 71950305 71950441 -13488039 - MIR SINE MIR -86 176 26 1479 197 4 19 chr17 71951403 71951662 -13486818 - AluJo SINE Alu -24 288 34 2294 92 3 0 chr17 71953541 71953835 -13484645 + AluSp SINE Alu 1 295 -18 183 239 0 0 chr17 71953862 71953908 -13484572 + (TG)n Simple_repeat Simple_repeat 2 47 0 1883 284 124 76 chr17 71954769 71954892 -13483588 + L2 LINE L2 734 850 -2464 2274 99 3 0 chr17 71954892 71955185 -13483295 - AluSq SINE Alu -19 294 1 1883 284 124 76 chr17 71955185 71956611 -13481869 + L2 LINE L2 850 2358 -956 2275 105 7 7 chr17 71957936 71958240 -13480240 - AluSx SINE Alu -8 304 1 350 288 115 75 chr17 71958585 71958646 -13479834 - HAL1b LINE L1 -681 667 610 3930 119 35 0 chr17 71958646 71959274 -13479206 - L1MC1 LINE L1 -13 6320 5671 350 288 115 75 chr17 71959274 71959507 -13478973 - HAL1b LINE L1 -738 610 361 198 0 0 0 chr17 71960131 71960153 -13478327 + (TTA)n Simple_repeat Simple_repeat 3 24 0 42634 33 23 2 chr17 71960153 71966158 -13472322 - L1PA3 LINE L1 -18 6137 1 1323 251 66 73 chr17 71967181 71967834 -13470646 + L1ME3A LINE L1 5519 6166 -4 580 346 71 38 chr17 71967834 71968143 -13470337 - L2 LINE L2 -609 2705 2373 2239 86 45 0 chr17 71968143 71968433 -13470047 + AluSg SINE Alu 1 303 -7 580 346 71 38 chr17 71968433 71968603 -13469877 - L2 LINE L2 -941 2373 2210 816 341 53 19 chr17 71970268 71970859 -13467621 - L2 LINE L2 -189 3083 2471 743 118 72 7 chr17 71970879 71971031 -13467449 - MER53 DNA DNA -26 163 2 1074 332 105 27 chr17 71971128 71972017 -13466463 - L2 LINE L2 -86 3227 2265 593 332 18 14 chr17 71972069 71972292 -13466188 - MIR SINE MIR -7 255 32 192 355 32 0 chr17 71973291 71973353 -13465127 - MIR SINE MIR -68 140 77 4477 93 43 3 chr17 71973603 71974269 -13464211 - L1MA2 LINE L1 -1 6303 5611 230 256 16 85 chr17 71975118 71975160 -13463320 + MIR SINE MIR 107 150 -112 2121 132 34 3 chr17 71975160 71975509 -13462971 + MER46B DNA MER2_type 1 235 -1 230 256 16 85 chr17 71975509 71975595 -13462885 + MIR SINE MIR 150 226 -36 243 0 0 0 chr17 71976979 71977006 -13461474 + (TG)n Simple_repeat Simple_repeat 2 28 0 217 185 31 0 chr17 71977068 71977133 -13461347 + (TA)n Simple_repeat Simple_repeat 1 67 0 189 0 0 0 chr17 71977133 71977154 -13461326 + (CA)n Simple_repeat Simple_repeat 2 22 0 400 268 55 8 chr17 71978243 71978370 -13460110 - MER102b DNA MER1_type -1 340 208 183 81 81 0 chr17 71980669 71980706 -13457774 + L2 LINE L2 3274 3313 0 910 243 4 62 chr17 71980818 71981061 -13457419 + MLT2C2 LTR ERVL 229 457 -7 330 194 0 0 chr17 71982677 71982749 -13455731 + CT-rich Low_complexity Low_complexity 3 74 0 34 24 0 0 chr17 71983116 71983157 -13455323 + AT_rich Low_complexity Low_complexity 1 41 0 2085 143 0 0 chr17 71983333 71983504 -13454976 - AluSx SINE Alu -11 301 128 375 23 0 0 chr17 71983504 71983548 -13454932 + (TG)n Simple_repeat Simple_repeat 1 44 0 2085 143 0 0 chr17 71983548 71983677 -13454803 - AluSx SINE Alu -183 129 1 204 97 0 0 chr17 71983731 71983762 -13454718 + (TC)n Simple_repeat Simple_repeat 1 31 0 400 269 42 0 chr17 71984082 71984249 -13454231 + MER104 DNA MER2_type 4 177 -3 629 290 67 0 chr17 71984311 71984504 -13453976 - MIR SINE MIR -56 206 1 238 240 50 91 chr17 71984995 71985116 -13453364 + MIR SINE MIR 86 201 -61 326 290 40 32 chr17 71986217 71986341 -13452139 - MIR SINE MIR -54 208 84 342 296 55 70 chr17 71986766 71986965 -13451515 + MIR SINE MIR 67 262 0 2278 90 0 0 chr17 71989185 71989474 -13449006 - AluSc SINE Alu -20 289 1 24 0 0 0 chr17 71990153 71990177 -13448303 + AT_rich Low_complexity Low_complexity 1 24 0 316 309 96 39 chr17 71990659 71990837 -13447643 + MIR SINE MIR 57 244 -18 1048 76 0 0 chr17 71990921 71991065 -13447415 + L1PA13 LINE L1 6020 6163 0 186 291 101 13 chr17 71991088 71991167 -13447313 - MIR SINE MIR -20 242 157 1836 209 11 21 chr17 71991167 71991541 -13446939 - MLT1A2 LTR MaLR 0 374 5 768 145 0 0 chr17 71993608 71993725 -13444755 - AluSg/x SINE Alu -11 301 185 2120 110 17 0 chr17 71994041 71994341 -13444139 + AluSx SINE Alu 6 310 -2 1582 195 7 3 chr17 71995224 71995522 -13442958 - AluJb SINE Alu -5 307 9 546 201 52 1 chr17 71995527 71995665 -13442815 - L1ME4a LINE L1 -287 5834 5690 27 29 0 0 chr17 71996503 71996537 -13441943 + AT_rich Low_complexity Low_complexity 1 34 0 1146 189 81 4 chr17 71997180 71997428 -13441052 - MER58B DNA MER1_type 0 341 75 23969 93 4 8 chr17 71997428 72001737 -13436743 + L1PA8 LINE L1 1876 6165 -7 234 344 14 71 chr17 72001960 72002104 -13436376 + MIR3 SINE MIR 45 179 -43 2232 114 3 0 chr17 72002432 72002738 -13435742 + AluSx SINE Alu 1 307 -5 297 0 0 0 chr17 72002739 72002772 -13435708 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 198 373 0 0 chr17 72003030 72003097 -13435383 - MIR SINE MIR -177 85 19 481 278 111 30 chr17 72003228 72003462 -13435018 - MIR SINE MIR -6 256 4 2337 83 19 0 chr17 72003845 72004159 -13434321 - MER1A DNA MER1_type 0 529 210 1857 161 0 0 chr17 72004147 72004426 -13434054 - MER1A DNA MER1_type -248 279 1 * 207 296 281 7 chr17 72004854 72004989 -13433491 + L2 LINE L2 2882 3053 -219 995 184 6 6 chr17 72005058 72005226 -13433254 + FAM SINE Alu 3 170 -5 183 354 56 31 chr17 72005259 72005420 -13433060 + L2 LINE L2 3108 3272 0 1896 140 54 46 chr17 72006586 72006958 -13431522 - THE1C LTR MaLR 0 375 1 866 237 44 44 chr17 72007308 72007624 -13430856 - L1MC5 LINE L1 -559 7402 7087 1012 174 11 5 chr17 72007701 72007885 -13430595 - MER46B DNA MER2_type -1 235 51 405 115 0 0 chr17 72007885 72007963 -13430517 + (TA)n Simple_repeat Simple_repeat 1 78 0 1926 119 19 0 chr17 72007984 72008244 -13430236 - AluSx SINE Alu -25 287 23 524 92 0 0 chr17 72008255 72008330 -13430150 - MER46B DNA MER2_type -181 55 106 1911 119 66 74 chr17 72008330 72008430 -13430050 - THE1C LTR MaLR 0 375 276 2991 128 85 24 chr17 72008430 72008983 -13429497 + LTR4 LTR ERV1 1 587 -1 1911 119 66 74 chr17 72008983 72009260 -13429220 - THE1C LTR MaLR -99 276 1 723 118 18 0 chr17 72009260 72009368 -13429112 - MER46B DNA MER2_type -251 110 1 364 149 75 65 chr17 72009444 72009551 -13428929 - L1MC5 LINE L1 -1089 6872 6765 22 35 0 0 chr17 72011164 72011193 -13427287 + AT_rich Low_complexity Low_complexity 1 29 0 414 39 0 0 chr17 72011333 72011385 -13427095 + (CA)n Simple_repeat Simple_repeat 2 53 0 965 150 18 96 chr17 72013054 72013108 -13425372 + L1MCa LINE L1 781 838 -5588 1625 146 27 41 chr17 72013108 72013402 -13425078 + AluJo SINE Alu 11 300 -12 965 150 18 96 chr17 72013402 72013567 -13424913 + L1MCa LINE L1 838 983 -5443 3293 220 57 12 chr17 72013603 72014361 -13424119 - MER21B LTR ERV1 -53 810 19 429 165 25 25 chr17 72014383 72014462 -13424018 - MER21B LTR ERV1 -773 90 12 5438 184 73 55 chr17 72014473 72015251 -13423229 + L1MCa LINE L1 974 1736 -4690 1680 169 13 29 chr17 72015251 72015565 -13422915 + AluJo SINE Alu 3 311 -1 5438 184 73 55 chr17 72015565 72017652 -13420828 + L1MCa LINE L1 1736 3890 -2536 1417 194 11 8 chr17 72018734 72019002 -13419478 - MER2 DNA MER2_type -1 344 76 2400 128 0 32 chr17 72019525 72019567 -13418913 - THE1B LTR MaLR 0 364 322 2191 99 7 3 chr17 72019567 72019860 -13418620 + AluSg SINE Alu 1 294 -16 2400 128 0 32 chr17 72019860 72020193 -13418287 - THE1B LTR MaLR -42 322 1 1868 186 68 66 chr17 72020214 72020714 -13417766 + MLT1D LTR MaLR 1 501 -4 182 91 30 0 chr17 72022328 72022361 -13416119 + (TA)n Simple_repeat Simple_repeat 2 35 0 1964 127 0 7 chr17 72023512 72023821 -13414659 - AluSx SINE Alu 0 308 2 781 257 40 32 chr17 72023924 72024173 -13414307 - MIR SINE MIR -11 251 1 206 31 0 31 chr17 72024598 72024630 -13413850 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2041 58 0 0 chr17 72024638 72024881 -13413599 - AluY SINE Alu -68 243 1 211 212 91 45 chr17 72025543 72025609 -13412871 + MIR SINE MIR 117 185 -77 280 333 85 4 chr17 72025729 72025942 -13412538 - L1ME LINE L1 -649 5515 5289 302 271 71 58 chr17 72026074 72026314 -13412166 - HAL1 LINE L1 -1046 1461 1219 229 304 76 106 chr17 72026491 72026741 -13411739 + L2 LINE L2 2808 3039 -233 2686 101 3 11 chr17 72026741 72027118 -13411362 + THE1C LTR MaLR 1 374 -1 229 304 76 106 chr17 72027118 72027338 -13411142 + L2 LINE L2 3039 3264 -8 39 38 0 0 chr17 72028206 72028259 -13410221 + AT_rich Low_complexity Low_complexity 1 53 0 1596 133 17 65 chr17 72028295 72028694 -13409786 + AluJb SINE Alu 22 406 0 259 197 136 0 chr17 72029547 72029613 -13408867 + MLT1H LTR MaLR 473 547 -2 435 156 0 62 chr17 72029984 72030080 -13408400 - MER3 DNA MER1_type 0 209 120 996 229 29 52 chr17 72030089 72030399 -13408081 + L1MCb LINE L1 3 305 -5740 359 286 110 55 chr17 72030433 72030615 -13407865 - LTR33 LTR ERVL -258 263 72 25 65 0 0 chr17 72031252 72031298 -13407182 + AT_rich Low_complexity Low_complexity 1 46 0 15836 107 6 29 chr17 72031308 72034784 -13403696 + L1P3 LINE L1 8 3478 -2983 1110 198 22 44 chr17 72034784 72035011 -13403469 - AluJo SINE Alu -90 222 1 702 179 48 14 chr17 72035011 72035156 -13403324 - L1M3e LINE L1 -6874 156 7 25 0 0 0 chr17 72035243 72035268 -13403212 + AT_rich Low_complexity Low_complexity 1 25 0 4735 119 35 12 chr17 72035268 72036994 -13401486 - L1PA16 LINE L1 -9 6157 4397 7280 223 19 6 chr17 72037001 72038762 -13399718 - L1PA16 LINE L1 -1966 4180 2398 26 0 0 0 chr17 72038890 72038916 -13399564 + AT_rich Low_complexity Low_complexity 1 26 0 2159 100 27 0 chr17 72039206 72039506 -13398974 - AluSg SINE Alu -2 308 1 973 283 59 48 chr17 72040735 72041173 -13397307 - L2 LINE L2 -19 3294 2852 379 200 67 29 chr17 72041202 72041307 -13397173 - MIR SINE MIR -28 234 126 5714 164 15 15 chr17 72041987 72042357 -13396123 + L1PA16 LINE L1 4325 4693 -1473 2091 121 0 7 chr17 72042357 72042655 -13395825 + AluSc SINE Alu 1 296 -13 5714 164 15 15 chr17 72042655 72044119 -13394361 + L1PA16 LINE L1 4693 6157 -9 22 35 0 0 chr17 72044505 72044534 -13393946 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr17 72045238 72045276 -13393204 + AT_rich Low_complexity Low_complexity 1 38 0 26 64 0 0 chr17 72046378 72046425 -13392055 + AT_rich Low_complexity Low_complexity 1 47 0 180 0 0 0 chr17 72046497 72046517 -13391963 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1002 180 0 45 chr17 72046675 72046875 -13391605 - L1MB8 LINE L1 -72 6106 5916 1193 140 89 92 chr17 72047146 72047417 -13391063 - L1MB8 LINE L1 -441 5743 5474 2550 165 26 65 chr17 72047657 72048227 -13390253 - L1PA16 LINE L1 -19 6147 5600 1901 129 58 20 chr17 72048976 72049270 -13389210 - AluSx SINE Alu -7 305 1 217 265 147 0 chr17 72049442 72049544 -13388936 + L2 LINE L2 3197 3313 0 2236 124 0 6 chr17 72049597 72049911 -13388569 + AluSx SINE Alu 1 312 0 287 262 24 0 chr17 72049911 72049995 -13388485 - L1ME4a LINE L1 -73 6048 5963 21 0 0 0 chr17 72050044 72050065 -13388415 + AT_rich Low_complexity Low_complexity 1 21 0 601 305 95 11 chr17 72051188 72051450 -13387030 + L2 LINE L2 2826 3109 -204 991 166 0 55 chr17 72051532 72051713 -13386767 + AluJo SINE Alu 4 174 -138 1902 154 52 9 chr17 72053141 72053471 -13385009 - MER7A DNA MER2_type 0 346 5 232 321 123 25 chr17 72053477 72053497 -13384983 + MIR3 SINE MIR 73 90 -118 2096 123 0 3 chr17 72053497 72053799 -13384681 - AluSx SINE Alu -11 301 1 232 321 123 25 chr17 72053799 72053859 -13384621 + MIR3 SINE MIR 90 161 -47 2320 64 3 10 chr17 72054040 72054336 -13384144 + AluY SINE Alu 1 294 -17 2533 241 45 18 chr17 72054870 72055655 -13382825 + L1MD3 LINE L1 6964 7977 -18 190 211 11 11 chr17 72055984 72056074 -13382406 + (TA)n Simple_repeat Simple_repeat 2 91 0 1579 155 7 76 chr17 72057327 72057655 -13380825 + AluJb SINE Alu 1 307 0 25 0 0 0 chr17 72058102 72058127 -13380353 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr17 72058258 72058286 -13380194 + AT_rich Low_complexity Low_complexity 1 28 0 431 125 102 0 chr17 72058290 72058378 -13380102 - L1MA7 LINE L1 -2 6289 6193 21 36 0 0 chr17 72061204 72061232 -13377248 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr17 72061419 72061459 -13377021 + AT_rich Low_complexity Low_complexity 1 40 0 27 0 0 0 chr17 72061831 72061858 -13376622 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr17 72061887 72061916 -13376564 + AT_rich Low_complexity Low_complexity 1 29 0 1952 162 0 0 chr17 72062441 72062737 -13375743 - AluJb SINE Alu -16 296 1 1364 170 190 3 chr17 72062813 72063102 -13375378 + MER7A DNA MER2_type 2 342 -4 2074 98 56 0 chr17 72063608 72063895 -13374585 + AluSg SINE Alu 3 305 -5 1316 227 212 73 chr17 72064464 72065337 -13373143 - L2 LINE L2 0 3313 2292 1360 309 60 28 chr17 72066000 72066714 -13371766 + HERV16 LTR ERVL 708 1481 -3515 3164 171 63 21 chr17 72066714 72067346 -13371134 + MER67B LTR ERV1 3 661 0 1360 309 60 28 chr17 72067346 72067442 -13371038 + HERV16 LTR ERVL 1481 1572 -3424 1751 288 55 12 chr17 72067470 72067980 -13370500 + HERV16 LTR ERVL 1670 2201 -2795 1756 191 88 35 chr17 72067982 72068176 -13370304 - MLT1C LTR MaLR 0 467 285 2272 95 7 3 chr17 72068176 72068472 -13370008 - AluSg SINE Alu -13 297 1 1756 191 88 35 chr17 72068472 72068700 -13369780 - MLT1C LTR MaLR -182 285 23 1225 265 75 52 chr17 72068729 72069287 -13369193 + HERV16 LTR ERVL 2245 2815 -2181 1006 184 62 0 chr17 72069425 72069604 -13368876 - MER20 DNA MER1_type 0 219 30 206 121 0 0 chr17 72070546 72070579 -13367901 + (T)n Simple_repeat Simple_repeat 1 33 0 866 325 85 37 chr17 72071638 72072392 -13366088 + L1M3a LINE L1 2 791 -5164 5884 218 61 16 chr17 72072410 72075062 -13363418 + L1M3f LINE L1 539 3312 -3016 487 223 20 47 chr17 72075062 72075210 -13363270 + MLT1B LTR MaLR 169 312 -155 531 158 74 0 chr17 72075231 72075326 -13363154 + MLT1B LTR MaLR 289 390 0 224 333 157 6 chr17 72075829 72075988 -13362492 - MIR3 SINE MIR 0 208 26 1428 173 101 78 chr17 72076018 72076405 -13362075 - MSTD LTR MaLR 0 396 1 24 0 0 0 chr17 72076412 72076436 -13362044 + AT_rich Low_complexity Low_complexity 1 24 0 471 303 47 34 chr17 72076996 72077230 -13361250 + MIR SINE MIR 10 246 -16 22 0 0 0 chr17 72077857 72077879 -13360601 + AT_rich Low_complexity Low_complexity 1 22 0 338 271 198 36 chr17 72080048 72080297 -13358183 - L1MC4 LINE L1 -28 8014 7607 428 309 45 8 chr17 72080356 72080607 -13357873 - L1MC5 LINE L1 -519 7497 7262 1910 94 69 7 chr17 72084001 72084277 -13354203 - AluSx SINE Alu -16 296 4 369 335 201 33 chr17 72084584 72085372 -13353108 + L2 LINE L2 1315 2234 -1080 1053 214 39 0 chr17 72085394 72085600 -13352880 - MER58A DNA MER1_type -9 215 2 506 336 152 14 chr17 72085623 72085992 -13352488 + L2 LINE L2 2253 2672 -642 347 343 72 97 chr17 72086013 72086404 -13352076 + L2 LINE L2 2886 3266 -6 239 252 130 17 chr17 72087034 72087149 -13351331 - MLT1H LTR MaLR -16 533 406 303 219 0 31 chr17 72087656 72087752 -13350728 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 22 35 0 0 chr17 72087798 72087827 -13350653 + AT_rich Low_complexity Low_complexity 1 29 0 349 328 8 30 chr17 72087905 72088039 -13350441 - MIR SINE MIR -109 153 23 26 0 0 0 chr17 72088048 72088074 -13350406 + AT_rich Low_complexity Low_complexity 1 26 0 730 142 8 0 chr17 72088203 72088323 -13350157 - L1MA4 LINE L1 -5 6295 6175 29 47 0 0 chr17 72088490 72088533 -13349947 + AT_rich Low_complexity Low_complexity 1 43 0 1185 194 0 0 chr17 72088747 72088979 -13349501 - L1MD1 LINE L1 -403 5839 5608 2265 96 3 3 chr17 72089085 72089387 -13349093 - AluSq SINE Alu -10 303 2 30 27 0 0 chr17 72089646 72089683 -13348797 + AT_rich Low_complexity Low_complexity 1 37 0 502 284 78 10 chr17 72089724 72089928 -13348552 - MIR SINE MIR -32 230 13 659 275 82 16 chr17 72090814 72091058 -13347422 + MIR SINE MIR 2 261 -1 23 54 0 0 chr17 72091427 72091464 -13347016 + AT_rich Low_complexity Low_complexity 1 37 0 2711 3 0 0 chr17 72091824 72092119 -13346361 - AluYa5 SINE Alu -16 295 1 4896 125 33 53 chr17 72092478 72093364 -13345116 + L1PBa LINE L1 453 1320 -5543 7050 209 26 4 chr17 72093366 72094951 -13343529 + L1 LINE L1 2110 3728 -2418 521 124 11 11 chr17 72094950 72094991 -13343489 + L1PB1 LINE L1 5749 5789 -362 * 561 12 0 37 chr17 72094991 72095072 -13343408 + (TA)n Simple_repeat Simple_repeat 1 78 0 521 124 11 11 chr17 72095072 72095119 -13343361 + L1PB1 LINE L1 5788 5837 -314 2016 113 3 3 chr17 72095124 72095425 -13343055 - L1PB1 LINE L1 -409 5742 5442 562 68 0 0 chr17 72095423 72095496 -13342984 + L1PB1 LINE L1 5719 5791 -360 * 228 219 0 31 chr17 72095496 72095560 -13342920 + (TA)n Simple_repeat Simple_repeat 1 62 0 2177 111 25 46 chr17 72095560 72095864 -13342616 + L1PB1 LINE L1 5782 6077 -97 2903 6 0 0 chr17 72095864 72096182 -13342298 + AluYb8 SINE Alu 1 318 0 2177 111 25 46 chr17 72096182 72096278 -13342202 + L1PB1 LINE L1 6077 6174 0 1643 150 112 0 chr17 72096359 72096672 -13341808 + MER7A DNA MER2_type 1 346 0 1746 159 7 20 chr17 72097295 72097597 -13340883 - AluJo SINE Alu -13 299 2 2321 78 3 7 chr17 72097908 72098217 -13340263 - AluY SINE Alu -3 308 1 5335 145 39 34 chr17 72098297 72099600 -13338880 - L1MA8 LINE L1 -7 6284 4977 372 192 14 14 chr17 72099600 72099673 -13338807 - Tigger5 DNA MER2_type 0 2323 2251 229 224 20 0 chr17 72099642 72099691 -13338789 - Tigger5 DNA MER2_type -2268 55 6 * 233 122 24 0 chr17 72099718 72099759 -13338721 + L1 LINE L1 5146 5187 -959 * 1429 159 7 30 chr17 72099758 72100029 -13338451 - L1M3e LINE L1 -6765 265 1 309 310 124 0 chr17 72100681 72100810 -13337670 - MIR3 SINE MIR -45 163 19 393 190 149 25 chr17 72100836 72100957 -13337523 + L2 LINE L2 3159 3294 -19 185 225 0 0 chr17 72101044 72101084 -13337396 + L2 LINE L2 3265 3304 -9 1772 178 3 0 chr17 72101206 72101504 -13336976 - AluJb SINE Alu -11 301 3 23 0 0 0 chr17 72103716 72103739 -13334741 + AT_rich Low_complexity Low_complexity 1 23 0 2144 80 17 3 chr17 72104270 72104559 -13333921 + AluSx SINE Alu 1 293 -19 1861 143 0 3 chr17 72105340 72105627 -13332853 + AluJb SINE Alu 1 286 -26 570 253 129 13 chr17 72105941 72106174 -13332306 + MIR SINE MIR 1 260 -2 312 341 106 56 chr17 72106985 72107629 -13330851 - L2 LINE L2 -43 3229 2563 360 260 110 20 chr17 72107913 72108013 -13330467 - MLT2E LTR ERVL -479 149 41 770 314 163 28 chr17 72108239 72108882 -13329598 - L2 LINE L2 -823 2491 1762 237 224 0 20 chr17 72108917 72108966 -13329514 + CT-rich Low_complexity Low_complexity 3 50 0 354 45 0 0 chr17 72109302 72109346 -13329134 + (TCTCCC)n Simple_repeat Simple_repeat 4 47 0 9365 60 6 88 chr17 72109347 72110798 -13327682 + SVA Other Other 55 1386 0 31 58 0 0 chr17 72110942 72110994 -13327486 + AT_rich Low_complexity Low_complexity 1 52 0 259 261 15 0 chr17 72113412 72113477 -13325003 - MLT1H LTR MaLR -470 79 14 1982 76 57 4 chr17 72114014 72114311 -13324169 - AluSc SINE Alu 0 311 1 207 139 0 0 chr17 72114726 72114762 -13323718 + (TG)n Simple_repeat Simple_repeat 1 36 0 33 0 0 0 chr17 72115513 72115546 -13322934 + AT_rich Low_complexity Low_complexity 1 33 0 5150 129 31 36 chr17 72116473 72117849 -13320631 + L1PA15 LINE L1 4795 6165 0 182 351 52 0 chr17 72117937 72118014 -13320466 - MIR SINE MIR -75 133 53 618 215 47 37 chr17 72118797 72118988 -13319492 - LTR45B LTR ERV1 0 489 297 554 300 51 51 chr17 72119384 72119677 -13318803 - L2 LINE L2 -13 3300 3008 291 284 32 11 chr17 72119714 72119878 -13318602 - L2 LINE L2 -1387 1927 1686 23 33 0 0 chr17 72121013 72121043 -13317437 + AT_rich Low_complexity Low_complexity 1 30 0 4262 81 10 96 chr17 72121051 72121405 -13317075 - L1PB1 LINE L1 -4 6147 5887 288 0 0 0 chr17 72121405 72121437 -13317043 + (TG)n Simple_repeat Simple_repeat 2 33 0 4262 81 10 96 chr17 72121437 72121812 -13316668 - L1PB1 LINE L1 -264 5887 5481 5490 127 82 6 chr17 72121812 72122885 -13315595 - L1PBa LINE L1 -5437 1426 127 293 310 0 35 chr17 72122885 72123001 -13315479 + LTR16A LTR ERVL 240 351 -99 739 273 105 0 chr17 72124231 72124440 -13314040 + MIR SINE MIR 2 232 -30 204 135 0 0 chr17 72124440 72124477 -13314003 + (TA)n Simple_repeat Simple_repeat 2 38 0 505 289 42 0 chr17 72124481 72124623 -13313857 - L2 LINE L2 -4 3309 3162 30 69 0 0 chr17 72124681 72124739 -13313741 + AT_rich Low_complexity Low_complexity 1 58 0 193 261 43 14 chr17 72124758 72124827 -13313653 + L2 LINE L2 3085 3155 -158 327 286 61 0 chr17 72125852 72125950 -13312530 + MER67D LTR ERV1 312 415 -99 313 304 152 0 chr17 72125951 72126076 -13312404 + L2 LINE L2 3170 3313 0 23 0 0 0 chr17 72126189 72126212 -13312268 + AT_rich Low_complexity Low_complexity 1 23 0 741 114 0 0 chr17 72127141 72127255 -13311225 - AluSp/q SINE Alu 0 313 200 906 206 22 0 chr17 72127795 72127979 -13310501 - MER5A DNA MER1_type 0 189 2 245 29 29 0 chr17 72128346 72128380 -13310100 + (TA)n Simple_repeat Simple_repeat 1 35 0 2312 103 0 7 chr17 72128380 72128682 -13309798 - AluSx SINE Alu -12 300 1 953 162 27 0 chr17 72129471 72129619 -13308861 + Tigger7 DNA MER2_type 1 152 -2335 1561 172 31 0 chr17 72130264 72130520 -13307960 + Tigger7 DNA MER2_type 1 264 -2223 619 135 21 0 chr17 72130522 72130618 -13307862 + Tigger7 DNA MER2_type 2390 2487 0 228 227 93 27 chr17 72132330 72132405 -13306075 - MIR3 SINE MIR -8 200 121 436 281 116 25 chr17 72133239 72133660 -13304820 - L1MEd LINE L1 -3618 2511 2080 2235 169 13 0 chr17 72133731 72134116 -13304364 - MLT1B LTR MaLR 0 390 1 563 289 128 32 chr17 72134370 72135319 -13303161 - L1MEd LINE L1 -867 1623 597 186 43 0 0 chr17 72135894 72135917 -13302563 + (T)n Simple_repeat Simple_repeat 1 23 0 2221 114 0 0 chr17 72136051 72136349 -13302131 - AluSx SINE Alu -14 298 1 874 256 114 3 chr17 72136669 72136977 -13301503 - L1M4 LINE L1 -1315 4831 4490 428 304 8 89 chr17 72137075 72137332 -13301148 + MIR SINE MIR 8 243 -19 1968 133 60 31 chr17 72137367 72137719 -13300761 - THE1B LTR MaLR 0 364 3 346 239 165 0 chr17 72137881 72137990 -13300490 - L2 LINE L2 0 3313 3187 15410 141 45 11 chr17 72138029 72140655 -13297825 - Tigger2 DNA MER2_type -3 2715 1 7483 139 21 25 chr17 72143152 72143218 -13295262 - HSMAR2 DNA Mariner -1 1301 1236 2051 107 7 0 chr17 72143218 72143499 -13294981 + AluSx SINE Alu 1 283 -29 384 77 0 0 chr17 72143499 72143551 -13294929 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 7483 139 21 25 chr17 72143551 72144790 -13293690 - HSMAR2 DNA Mariner -64 1238 1 4372 174 52 29 chr17 72144931 72145726 -13292754 - L1MB2 LINE L1 -1 6170 5395 183 42 0 0 chr17 72145726 72145750 -13292730 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2042 117 0 0 chr17 72145754 72146028 -13292452 - AluSc SINE Alu -35 274 1 4372 174 52 29 chr17 72146028 72146552 -13291928 - L1MB2 LINE L1 -778 5393 4795 1226 269 85 9 chr17 72146657 72147104 -13291376 - L1MEd LINE L1 -4738 2221 1741 242 244 158 43 chr17 72147130 72147294 -13291186 - L1MEd LINE L1 -5294 1565 1383 351 284 104 84 chr17 72147295 72147669 -13290811 - L1 LINE L1 -1131 5015 4635 26 64 0 0 chr17 72147786 72147833 -13290647 + AT_rich Low_complexity Low_complexity 1 47 0 183 42 0 0 chr17 72147856 72147880 -13290600 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 246 311 72 60 chr17 72147894 72148212 -13290268 - L1M4 LINE L1 -1787 4359 4038 39 38 0 0 chr17 72148365 72148418 -13290062 + AT_rich Low_complexity Low_complexity 1 53 0 502 258 56 38 chr17 72148419 72148706 -13289774 - L1M4 LINE L1 -1043 5103 4812 409 316 15 15 chr17 72148713 72148846 -13289634 - L1MEd LINE L1 -5508 1439 1307 25 75 0 0 chr17 72149549 72149602 -13288878 + AT_rich Low_complexity Low_complexity 1 53 0 424 187 0 55 chr17 72149699 72149790 -13288690 - FLAM_A SINE Alu -5 137 52 1830 169 14 0 chr17 72151638 72151934 -13286546 + AluJo SINE Alu 5 304 -8 189 0 0 0 chr17 72153101 72153122 -13285358 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 285 29 0 0 chr17 72153522 72153556 -13284924 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1260 166 0 5 chr17 72153566 72153765 -13284715 - AluJb SINE Alu -28 284 87 242 252 244 35 chr17 72154918 72155033 -13283447 - L2 LINE L2 -17 3296 3158 398 262 70 128 chr17 72155033 72155488 -13282992 - L2 LINE L2 -236 3036 2556 886 211 50 0 chr17 72155488 72155687 -13282793 + MER3 DNA MER1_type 1 209 0 398 262 70 128 chr17 72155687 72155850 -13282630 - L2 LINE L2 -716 2556 1904 1791 176 46 0 chr17 72158470 72158799 -13279681 + MSTB1 LTR MaLR 1 344 -88 1173 219 11 22 chr17 72159249 72159523 -13278957 + L1MB4 LINE L1 5882 6152 -28 24 0 0 0 chr17 72159532 72159556 -13278924 + AT_rich Low_complexity Low_complexity 1 24 0 297 221 33 41 chr17 72159751 72159873 -13278607 - L1MC/D LINE L1 -1988 5820 5700 374 86 25 141 chr17 72159926 72160332 -13278148 + (TA)n Simple_repeat Simple_repeat 1 358 0 2973 98 12 2 chr17 72160367 72160773 -13277707 - MLT2A2 LTR ERVL -43 410 1 366 226 8 24 chr17 72161477 72161601 -13276879 + GA-rich Low_complexity Low_complexity 1 122 0 262 64 0 43 chr17 72162064 72162111 -13276369 + (GGA)n Simple_repeat Simple_repeat 2 46 0 694 295 44 16 chr17 72162112 72162363 -13276117 - MIR SINE MIR 0 262 5 536 42 14 0 chr17 72162468 72162539 -13275941 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 323 364 89 26 chr17 72162540 72162842 -13275638 - L1MEd LINE L1 -5677 442 122 22 35 0 0 chr17 72163122 72163151 -13275329 + AT_rich Low_complexity Low_complexity 1 29 0 302 264 11 22 chr17 72163485 72163576 -13274904 - L1MC4 LINE L1 -1339 6703 6614 21 36 0 0 chr17 72165495 72165523 -13272957 + AT_rich Low_complexity Low_complexity 1 28 0 286 98 0 0 chr17 72166194 72166235 -13272245 - MLT1I LTR MaLR -46 363 323 7548 35 0 0 chr17 72166244 72167892 -13270588 - L1PA3 LINE L1 0 6155 4508 1209 34 0 0 chr17 72167892 72168039 -13270441 + L1PA3 LINE L1 4359 4505 -1641 725 295 41 53 chr17 72168091 72168433 -13270047 - MLT1J2 LTR MaLR -110 340 3 365 367 108 21 chr17 72170449 72170896 -13267584 - L2 LINE L2 -6 3266 2782 197 158 79 0 chr17 72171007 72171045 -13267435 - L2 LINE L2 -408 2906 2866 2142 113 7 0 chr17 72171174 72171466 -13267014 + AluSx SINE Alu 1 294 -18 1410 173 75 56 chr17 72171794 72172152 -13266328 - MLT1A1 LTR MaLR 0 365 1 566 261 11 17 chr17 72172267 72172443 -13266037 - L1MD2 LINE L1 -21 6338 6164 433 310 48 5 chr17 72172878 72173084 -13265396 - MIR3 SINE MIR -21 241 15 203 309 8 0 chr17 72173395 72173521 -13264959 + (TA)n Simple_repeat Simple_repeat 1 127 0 2017 120 14 0 chr17 72173575 72173866 -13264614 + AluSx SINE Alu 1 295 -17 200 29 0 59 chr17 72173871 72173905 -13264575 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 30 27 0 0 chr17 72174223 72174260 -13264220 + AT_rich Low_complexity Low_complexity 1 37 0 290 364 16 23 chr17 72175212 72175341 -13263139 + MIR3 SINE MIR 64 191 -17 386 235 143 0 chr17 72175716 72175835 -13262645 + L1ME LINE L1 5678 5813 -349 2117 122 3 7 chr17 72176025 72176321 -13262159 - AluSx SINE Alu -17 295 1 23 68 0 0 chr17 72176541 72176585 -13261895 + AT_rich Low_complexity Low_complexity 1 44 0 2508 289 95 27 chr17 72178302 72179690 -13258790 - L1ME3 LINE L1 -211 5951 4373 1552 190 30 13 chr17 72179690 72179990 -13258490 - AluJb SINE Alu -7 305 1 2508 289 95 27 chr17 72179990 72180640 -13257840 - L1ME3 LINE L1 -1789 4373 3769 505 221 126 95 chr17 72180652 72180885 -13257595 + MIR SINE MIR 4 241 -21 29 98 0 0 chr17 72181075 72181167 -13257313 + AT_rich Low_complexity Low_complexity 1 92 0 32 26 0 0 chr17 72181271 72181310 -13257170 + AT_rich Low_complexity Low_complexity 1 39 0 23 92 0 0 chr17 72181502 72181567 -13256913 + AT_rich Low_complexity Low_complexity 1 65 0 24 0 0 0 chr17 72182427 72182451 -13256029 + AT_rich Low_complexity Low_complexity 1 24 0 189 94 0 0 chr17 72183164 72183196 -13255284 + (TTA)n Simple_repeat Simple_repeat 3 34 0 1911 39 0 0 chr17 72183196 72183427 -13255053 - L1PA4 LINE L1 -18 6137 5907 271 350 78 28 chr17 72183738 72183866 -13254614 + MIR SINE MIR 30 166 -96 222 320 108 27 chr17 72183866 72184006 -13254474 - MER5A DNA MER1_type -2 187 28 185 261 22 0 chr17 72184053 72184099 -13254381 - L2 LINE L2 -1 3312 3266 * 747 272 5 28 chr17 72184069 72184282 -13254198 - MIR SINE MIR -44 218 11 30 45 0 0 chr17 72184571 72184615 -13253865 + AT_rich Low_complexity Low_complexity 1 44 0 388 322 19 27 chr17 72186289 72186550 -13251930 - L1ME3A LINE L1 -220 5950 5692 210 208 0 0 chr17 72186584 72186632 -13251848 + (TATG)n Simple_repeat Simple_repeat 1 48 0 243 298 160 32 chr17 72186731 72186919 -13251561 - L2 LINE L2 -480 2834 2623 294 212 0 59 chr17 72187146 72187231 -13251249 + MER5B DNA MER1_type 1 80 -98 183 301 178 0 chr17 72187312 72187385 -13251095 + MER5B DNA MER1_type 93 178 0 201 39 0 0 chr17 72187394 72187420 -13251060 + (TG)n Simple_repeat Simple_repeat 1 26 0 350 360 121 27 chr17 72187497 72187975 -13250505 - L2 LINE L2 -1087 2227 1705 311 298 64 21 chr17 72188492 72188633 -13249847 - L1ME4a LINE L1 -1 6120 5974 21 0 0 0 chr17 72189024 72189045 -13249435 + AT_rich Low_complexity Low_complexity 1 21 0 566 313 53 4 chr17 72189665 72189946 -13248534 - L1ME4a LINE L1 -302 5819 5525 338 292 80 15 chr17 72189975 72190112 -13248368 - MIR SINE MIR 0 262 117 1492 199 61 0 chr17 72190213 72190490 -13247990 + AluJb SINE Alu 1 294 -18 21 36 0 0 chr17 72190579 72190607 -13247873 + AT_rich Low_complexity Low_complexity 1 28 0 261 200 99 26 chr17 72190626 72190702 -13247778 - L1ME4a LINE L1 -1329 4817 4737 6748 24 4 1 chr17 72191780 72192579 -13245901 - L1PA4 LINE L1 -1 6154 5354 23 78 0 0 chr17 72193368 72193419 -13245061 + AT_rich Low_complexity Low_complexity 1 51 0 2312 134 8 0 chr17 72193542 72193899 -13244581 - L1PB4 LINE L1 -4 6152 5793 2603 93 25 6 chr17 72194613 72194979 -13243501 - THE1C LTR MaLR 0 375 3 845 337 29 10 chr17 72195649 72196032 -13242448 - LTR16C LTR ERVL -2 489 100 3956 159 47 13 chr17 72196126 72196832 -13241648 - MER44D DNA MER2_type -2 603 2 519 256 0 31 chr17 72196976 72197105 -13241375 - MIR SINE MIR -14 248 124 372 355 68 12 chr17 72197736 72197987 -13240493 - L2 LINE L2 -6 3307 3043 207 329 37 56 chr17 72198027 72198188 -13240292 - L2 LINE L2 -420 2894 2737 386 278 88 16 chr17 72198193 72198387 -13240093 - L2 LINE L2 -1814 1500 1293 25 0 0 0 chr17 72198956 72198981 -13239499 + AT_rich Low_complexity Low_complexity 1 25 0 216 267 36 78 chr17 72199067 72199281 -13239199 - MIR SINE MIR -1 261 62 26 0 0 0 chr17 72199579 72199605 -13238875 + AT_rich Low_complexity Low_complexity 1 26 0 2175 123 0 0 chr17 72199742 72200044 -13238436 - AluSx SINE Alu -10 302 1 207 246 0 82 chr17 72200606 72200667 -13237813 + L2 LINE L2 3251 3306 -7 2100 106 3 35 chr17 72201355 72201667 -13236813 - AluSx SINE Alu -10 302 1 213 65 0 0 chr17 72201755 72201786 -13236694 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1778 155 11 0 chr17 72204005 72204289 -13234191 - AluSx SINE Alu -23 289 3 2131 136 0 3 chr17 72204743 72205038 -13233442 - AluSx SINE Alu -14 298 5 420 288 125 11 chr17 72205163 72205347 -13233133 - MIR SINE MIR 0 262 58 2414 155 108 6 chr17 72207384 72207612 -13230868 - L1MB2 LINE L1 -1 6170 5943 547 245 141 13 chr17 72207612 72207699 -13230781 - L1PB4 LINE L1 -231 5925 5850 1787 118 8 0 chr17 72207699 72207953 -13230527 - AluSq SINE Alu 0 313 58 547 245 141 13 chr17 72207953 72208163 -13230317 - L1PB4 LINE L1 -306 5850 5590 2071 135 3 0 chr17 72208946 72209243 -13229237 - AluSg SINE Alu -12 298 1 21 82 0 0 chr17 72209420 72209469 -13229011 + AT_rich Low_complexity Low_complexity 1 49 0 184 179 107 54 chr17 72210547 72210603 -13227877 - L3 LINE CR1 -1092 485 427 560 75 12 25 chr17 72210767 72210847 -13227633 - MADE1 DNA Mariner 0 80 2 706 245 96 35 chr17 72212651 72213037 -13225443 - LTR15 LTR ERV1 -12 529 172 314 246 119 15 chr17 72213969 72214103 -13224377 + MIR SINE MIR 114 261 -1 2800 7 0 0 chr17 72214533 72214834 -13223646 + AluYa5 SINE Alu 1 301 -10 707 239 0 16 chr17 72215296 72215480 -13223000 + L1MB8 LINE L1 5995 6175 -3 604 289 165 59 chr17 72215618 72216081 -13222399 - L2 LINE L2 0 3272 2789 21 0 0 0 chr17 72217084 72217105 -13221375 + AT_rich Low_complexity Low_complexity 1 21 0 443 172 125 31 chr17 72217287 72217415 -13221065 - L2 LINE L2 -35 3278 3139 1202 276 38 57 chr17 72217457 72217932 -13220548 - L2 LINE L2 -386 2928 2463 225 0 0 0 chr17 72219843 72219868 -13218612 + (TA)n Simple_repeat Simple_repeat 2 26 0 190 218 0 73 chr17 72219872 72219927 -13218553 - L2 LINE L2 -38 3234 3184 * 512 308 147 27 chr17 72219925 72220299 -13218181 - L2 LINE L2 -342 2972 2554 201 74 0 0 chr17 72220808 72220835 -13217645 + (T)n Simple_repeat Simple_repeat 1 27 0 787 215 160 31 chr17 72222636 72222961 -13215519 - L1MC5 LINE L1 -61 7900 7534 25 0 0 0 chr17 72223819 72223844 -13214636 + AT_rich Low_complexity Low_complexity 1 25 0 408 182 0 0 chr17 72223956 72224044 -13214436 + (TG)n Simple_repeat Simple_repeat 2 89 0 675 273 193 16 chr17 72225484 72225934 -13212546 + L2 LINE L2 1159 1688 -1626 798 263 35 13 chr17 72225934 72226162 -13212318 + MIR SINE MIR 2 234 -28 350 270 26 43 chr17 72226191 72226306 -13212174 + L2 LINE L2 2852 2964 -349 2167 113 14 0 chr17 72226470 72226763 -13211717 - AluSx SINE Alu -15 297 1 23 0 0 0 chr17 72226806 72226829 -13211651 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr17 72227111 72227148 -13211332 + AT_rich Low_complexity Low_complexity 1 37 0 352 283 20 20 chr17 72227249 72227348 -13211132 + L2 LINE L2 3215 3313 0 2429 112 58 30 chr17 72227507 72227606 -13210874 - Tigger2 DNA MER2_type -1 2707 2612 2096 115 3 19 chr17 72227606 72227919 -13210561 - AluSx SINE Alu -1 311 4 2429 112 58 30 chr17 72227919 72228283 -13210197 - Tigger2 DNA MER2_type -96 2612 2273 454 143 0 14 chr17 72228273 72228343 -13210137 - Tigger2 DNA MER2_type -2649 69 1 * 2032 191 15 25 chr17 72228355 72228759 -13209721 - L1MB5 LINE L1 0 6174 5775 232 154 62 31 chr17 72229128 72229193 -13209287 - MIR SINE MIR -24 238 172 938 231 146 17 chr17 72229316 72229381 -13209099 + MER58B DNA MER1_type 2 57 -2363 1655 167 30 23 chr17 72229381 72229680 -13208800 - AluJb SINE Alu -11 301 1 938 231 146 17 chr17 72229680 72229909 -13208571 + MER58B DNA MER1_type 57 334 -7 181 338 0 59 chr17 72229913 72229981 -13208499 + MIR3 SINE MIR 130 193 -15 209 331 60 8 chr17 72230002 72230135 -13208345 + L2 LINE L2 1319 1458 -1856 209 376 10 10 chr17 72230297 72230398 -13208082 - MIR SINE MIR -110 152 52 574 320 30 15 chr17 72230641 72230841 -13207639 - MIR SINE MIR -10 252 50 2170 132 0 0 chr17 72230848 72231143 -13207337 - AluSx SINE Alu -17 295 1 1592 185 64 44 chr17 72231353 72231759 -13206721 - L1MDa LINE L1 -4504 2036 1623 258 136 0 0 chr17 72231768 72231812 -13206668 + (TG)n Simple_repeat Simple_repeat 1 44 0 275 224 134 0 chr17 72231889 72231956 -13206524 - Tigger3(Golem) DNA MER2_type -2953 76 1 3304 218 118 14 chr17 72232011 72232872 -13205608 - L1MDa LINE L1 -4943 1597 647 616 284 32 11 chr17 72233540 72233730 -13204750 + MIR SINE MIR 54 247 -15 299 220 0 0 chr17 72234379 72234438 -13204042 + MER96 DNA MER1_type? 116 174 -1 358 277 75 37 chr17 72235150 72235338 -13203142 - LTR67 LTR ERVL -7 550 356 329 269 136 74 chr17 72235371 72235628 -13202852 - LTR67 LTR ERVL -283 274 2 2242 121 0 0 chr17 72235705 72236011 -13202469 - AluSq SINE Alu -2 311 6 564 288 94 24 chr17 72237273 72237485 -13200995 - MIR SINE MIR -7 255 29 2465 85 0 3 chr17 72237768 72238074 -13200406 - AluSq SINE Alu -8 305 1 2229 115 0 0 chr17 72238146 72238441 -13200039 - AluSx SINE Alu -17 295 1 850 208 64 0 chr17 72239875 72240048 -13198432 + MIR SINE MIR 7 190 -72 2424 28 7 3 chr17 72240285 72240708 -13197772 - AluY SINE Alu 0 424 1 2103 121 0 55 chr17 72240718 72241048 -13197432 - AluSx SINE Alu 0 312 1 262 368 40 23 chr17 72241754 72241928 -13196552 - L2 LINE L2 -230 3042 2866 410 293 40 46 chr17 72241970 72242144 -13196336 - MER63A DNA MER1_type 0 210 38 806 270 67 27 chr17 72242322 72242652 -13195828 - LTR16A LTR ERVL -16 434 92 201 320 80 55 chr17 72242742 72242897 -13195583 - L2 LINE L2 -654 2660 2497 895 236 18 23 chr17 72242897 72243117 -13195363 + MER20 DNA MER1_type 1 219 0 201 320 80 55 chr17 72243117 72243161 -13195319 - L2 LINE L2 -817 2497 2456 994 194 80 0 chr17 72244015 72244216 -13194264 - MER58A DNA MER1_type 0 224 8 853 189 31 0 chr17 72244566 72244725 -13193755 + MER5B DNA MER1_type 13 176 -2 2066 130 0 26 chr17 72245179 72245486 -13192994 - AluSg SINE Alu -11 299 1 23 0 0 0 chr17 72245823 72245846 -13192634 + AT_rich Low_complexity Low_complexity 1 23 0 728 292 122 42 chr17 72245990 72246417 -13192063 - MLT1L LTR MaLR -8 607 147 552 252 41 20 chr17 72246417 72246564 -13191916 - MER58C DNA MER1_type -1 214 65 400 248 8 43 chr17 72246591 72246647 -13191833 + MER81 DNA DNA 1 52 -62 2479 81 0 0 chr17 72246647 72246956 -13191524 - AluSq SINE Alu -4 309 1 400 248 8 43 chr17 72246956 72247016 -13191464 + MER81 DNA DNA 52 113 -1 292 145 0 101 chr17 72248278 72248347 -13190133 + MER5A DNA MER1_type 9 70 -119 529 114 0 0 chr17 72248353 72248423 -13190057 + AluJ/FLAM SINE Alu 1 70 -242 207 0 0 0 chr17 72248426 72248449 -13190031 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 862 159 35 0 chr17 72248449 72248626 -13189854 + FRAM SINE Alu 1 177 0 267 290 230 0 chr17 72248629 72248729 -13189751 + MER5A DNA MER1_type 67 189 0 231 167 0 42 chr17 72248811 72248844 -13189636 + CT-rich Low_complexity Low_complexity 4 36 -13 2018 135 3 0 chr17 72248844 72249148 -13189332 - AluSx SINE Alu -7 305 1 231 167 0 42 chr17 72249148 72249162 -13189318 + CT-rich Low_complexity Low_complexity 36 49 0 389 254 68 8 chr17 72249163 72249281 -13189199 + MER5A DNA MER1_type 63 187 -2 190 313 134 0 chr17 72249612 72249724 -13188756 + L2 LINE L2 1803 1929 -1385 2264 99 7 0 chr17 72250238 72250531 -13187949 + AluSx SINE Alu 14 308 -4 183 205 0 0 chr17 72250613 72250652 -13187828 + CT-rich Low_complexity Low_complexity 4 42 0 528 217 6 12 chr17 72250672 72250838 -13187642 + CT-rich Low_complexity Low_complexity 2 166 0 207 287 35 78 chr17 72250888 72251003 -13187477 - L2 LINE L2 -42 3271 3162 1727 172 17 0 chr17 72251402 72251693 -13186787 - AluJb SINE Alu -14 298 3 489 329 6 12 chr17 72251950 72252120 -13186360 - L3 LINE CR1 -258 1319 1151 868 90 0 0 chr17 72253608 72253719 -13184761 + AluY SINE Alu 1 111 -200 180 0 0 0 chr17 72253746 72253766 -13184714 + (T)n Simple_repeat Simple_repeat 1 20 0 415 197 13 20 chr17 72254054 72254206 -13184274 + (TA)n Simple_repeat Simple_repeat 1 151 0 233 196 0 0 chr17 72254249 72254295 -13184185 - LTR66 LTR ERVL -171 439 394 523 133 0 0 chr17 72254320 72254395 -13184085 - AluSp/q SINE Alu -73 240 166 414 228 0 0 chr17 72254413 72254514 -13183966 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 1130 84 0 7 chr17 72254561 72254703 -13183777 + AluSx SINE Alu 31 171 -141 1610 138 0 4 chr17 72254803 72255034 -13183446 - AluSx SINE Alu -74 238 9 2255 91 0 0 chr17 72255083 72255370 -13183110 - AluSg SINE Alu -19 291 5 241 211 19 0 chr17 72255428 72255480 -13183000 + L2 LINE L2 3261 3313 0 896 310 30 24 chr17 72455607 72455936 -12982544 - MLT1E LTR MaLR -144 449 119 767 211 13 0 chr17 72455941 72456097 -12982383 - MLT1E LTR MaLR -435 158 1 717 277 112 58 chr17 72456340 72456824 -12981656 + LTR33 LTR ERVL 10 519 -2 310 273 65 11 chr17 72458201 72458307 -12980173 + MIR SINE MIR 28 140 -68 2070 121 0 0 chr17 72458519 72458844 -12979636 - AluSg SINE Alu 0 325 1 200 349 151 0 chr17 72459036 72459188 -12979292 - MIR SINE MIR 0 262 88 4162 145 27 39 chr17 72459212 72460104 -12978376 + L1MB8 LINE L1 5286 6172 -6 1556 164 4 0 chr17 72460729 72460985 -12977495 + MSTB1 LTR MaLR 176 432 0 361 356 91 22 chr17 72461103 72461153 -12977327 + L2 LINE L2 2157 2202 -1112 544 62 25 0 chr17 72461153 72461234 -12977246 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 361 356 91 22 chr17 72461234 72461413 -12977067 + L2 LINE L2 2202 2402 -912 350 332 131 20 chr17 72461404 72461603 -12976877 + L2 LINE L2 2921 3141 -172 * 1439 194 49 22 chr17 72461608 72461932 -12976548 - MER7A DNA MER2_type 0 346 16 382 99 55 0 chr17 72461982 72462073 -12976407 + (TA)n Simple_repeat Simple_repeat 1 96 0 2139 104 0 14 chr17 72462073 72462362 -12976118 - AluSx SINE Alu -27 285 1 234 354 10 20 chr17 72462363 72462462 -12976018 + L2 LINE L2 3183 3280 -33 390 162 9 19 chr17 72462542 72462647 -12975833 + GA-rich Low_complexity Low_complexity 3 106 0 609 323 41 18 chr17 72462956 72463176 -12975304 - MIR SINE MIR 0 262 38 267 304 6 32 chr17 72463202 72463360 -12975120 + GA-rich Low_complexity Low_complexity 1 154 0 225 94 0 0 chr17 72463422 72463454 -12975026 + (TC)n Simple_repeat Simple_repeat 1 32 0 22 35 0 0 chr17 72463537 72463566 -12974914 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr17 72464723 72464751 -12973729 + AT_rich Low_complexity Low_complexity 1 28 0 2178 75 0 0 chr17 72465105 72465412 -12973068 - AluY SINE Alu 0 307 1 1734 196 17 6 chr17 72465964 72466316 -12972164 - MLT1A1 LTR MaLR -9 356 1 209 346 75 15 chr17 72466403 72466536 -12971944 - MIR3 SINE MIR -26 182 42 267 225 0 0 chr17 72466770 72466841 -12971639 + (TA)n Simple_repeat Simple_repeat 2 72 0 1334 238 102 14 chr17 72466886 72467248 -12971232 + MSTD LTR MaLR 1 394 -2 286 272 30 95 chr17 72467256 72467425 -12971055 - MIR SINE MIR -102 160 3 901 266 20 25 chr17 72468120 72468316 -12970164 - MIR SINE MIR -2 260 64 1949 125 0 73 chr17 72468316 72468665 -12969815 + AluSx SINE Alu 1 312 0 901 266 20 25 chr17 72468665 72468712 -12969768 - MIR SINE MIR -198 64 18 235 331 24 14 chr17 72468738 72468864 -12969616 - MIR SINE MIR -68 140 12 2076 99 34 3 chr17 72469254 72469546 -12968934 - AluSx SINE Alu -11 301 1 1778 92 21 0 chr17 72471785 72472025 -12966455 + AluSg/x SINE Alu 66 310 -2 243 250 9 19 chr17 72473721 72473829 -12964651 + A-rich Low_complexity Low_complexity 3 109 0 267 103 0 0 chr17 72477511 72477550 -12960930 + (T)n Simple_repeat Simple_repeat 1 39 0 438 20 0 0 chr17 72478795 72478846 -12959634 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2161 142 30 20 chr17 72479600 72479994 -12958486 + MER48 LTR ERV1 1 398 0 403 328 108 9 chr17 72482071 72482303 -12956177 + MIR SINE MIR 2 256 -6 2525 189 3 75 chr17 72482318 72482790 -12955690 + MER41C LTR ERV1 1 423 -131 2326 92 0 10 chr17 72482790 72483096 -12955384 - AluSc SINE Alu -6 303 1 2525 189 3 75 chr17 72483096 72483220 -12955260 + MER41C LTR ERV1 423 554 0 1837 168 6 16 chr17 72483445 72483760 -12954720 - AluJo SINE Alu 0 312 1 282 277 155 13 chr17 72485033 72485188 -12953292 + MIR SINE MIR 66 242 -20 273 369 0 27 chr17 72485269 72485380 -12953100 - L2 LINE L2 -233 3039 2932 451 365 59 20 chr17 72485524 72485828 -12952652 - L2 LINE L2 -446 2868 2553 2154 107 0 13 chr17 72486268 72486568 -12951912 + AluSx SINE Alu 1 296 -16 430 313 202 21 chr17 72486599 72486767 -12951713 + L2 LINE L2 2475 2611 -703 1624 152 12 100 chr17 72486767 72487097 -12951383 - AluSx SINE Alu -11 301 1 430 313 202 21 chr17 72487097 72487260 -12951220 + L2 LINE L2 2611 2866 -448 405 234 56 0 chr17 72487311 72487418 -12951062 + MER58A DNA MER1_type 3 115 0 289 214 122 20 chr17 72487435 72487533 -12950947 + MER39 LTR ERV1 8 115 -592 * 395 235 84 41 chr17 72487514 72487897 -12950583 + LTR48B LTR ERV1 128 719 -68 1849 168 68 59 chr17 72487897 72488321 -12950159 + MSTA LTR MaLR 1 428 0 8937 164 35 12 chr17 72488321 72489935 -12948545 + MSTA-int LTR MaLR 1 1651 0 1759 121 76 125 chr17 72489935 72490300 -12948180 + MSTA LTR MaLR 1 382 -46 195 42 0 0 chr17 72490300 72490324 -12948156 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1554 75 19 0 chr17 72490324 72490538 -12947942 - L1PA7 LINE L1 0 6154 5937 1759 121 76 125 chr17 72490538 72490619 -12947861 + MSTA LTR MaLR 380 426 -2 367 180 0 0 chr17 72490739 72490800 -12947680 + MER58A DNA MER1_type 132 192 -32 420 372 74 19 chr17 72490816 72491031 -12947449 + L2 LINE L2 3046 3272 0 4463 138 26 9 chr17 72491285 72492099 -12946381 - L1PA16 LINE L1 -6 6160 5333 464 317 103 28 chr17 72492226 72492586 -12945894 + L1ME4a LINE L1 5562 5948 -173 214 342 58 25 chr17 72493653 72493783 -12944697 + MIR SINE MIR 46 191 -65 26 82 0 0 chr17 72495936 72495997 -12942483 + AT_rich Low_complexity Low_complexity 1 61 0 2069 126 51 31 chr17 72496777 72497133 -12941347 - THE1B LTR MaLR -1 363 1 180 0 0 0 chr17 72498242 72498262 -12940218 + (TG)n Simple_repeat Simple_repeat 1 20 0 317 343 82 0 chr17 72499378 72499524 -12938956 - MIR SINE MIR -21 241 84 207 200 33 67 chr17 72500504 72500564 -12937916 - L2 LINE L2 -8 3264 3207 329 377 124 4 chr17 72500631 72500904 -12937576 + L3 LINE CR1 1271 1576 -1 22 0 0 0 chr17 72501043 72501065 -12937415 + AT_rich Low_complexity Low_complexity 1 22 0 268 307 95 22 chr17 72501503 72501640 -12936840 + MIR SINE MIR 29 175 -87 185 170 43 21 chr17 72502261 72502308 -12936172 + MIR SINE MIR 109 156 -106 21 0 0 0 chr17 72502511 72502532 -12935948 + AT_rich Low_complexity Low_complexity 1 21 0 1637 173 0 88 chr17 72504480 72504821 -12933659 + AluJo SINE Alu 2 312 0 1075 302 55 10 chr17 72504860 72505277 -12933203 - L2 LINE L2 -896 2418 1983 851 152 0 0 chr17 72505278 72505403 -12933077 + FLAM_C SINE Alu 1 125 -18 242 109 0 0 chr17 72505409 72505455 -12933025 - LTR66 LTR ERVL -171 439 394 234 130 0 0 chr17 72505415 72505461 -12933019 + LTR66 LTR ERVL 394 439 -171 * 660 149 35 0 chr17 72505469 72505643 -12932837 + (TA)n Simple_repeat Simple_repeat 1 180 0 955 193 12 0 chr17 72505647 72505818 -12932662 + AluJb SINE Alu 136 308 -4 654 294 44 18 chr17 72505821 72506096 -12932384 - L2 LINE L2 -1328 1986 1705 2456 83 0 0 chr17 72506227 72506529 -12931951 + AluSg SINE Alu 9 310 0 1158 106 0 0 chr17 72507009 72507160 -12931320 + AluSg/x SINE Alu 145 295 -17 969 188 53 14 chr17 72507433 72507641 -12930839 - MER20 DNA MER1_type -2 217 2 451 257 74 14 chr17 72508055 72508203 -12930277 + MIR SINE MIR 101 257 -5 505 294 21 92 chr17 72509154 72509481 -12928999 - L3 LINE CR1 -76 1501 1198 693 256 41 5 chr17 72509631 72509826 -12928654 + MER63A DNA MER1_type 2 203 -7 22 56 0 0 chr17 72509864 72509900 -12928580 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr17 72510593 72510614 -12927866 + AT_rich Low_complexity Low_complexity 1 21 0 186 290 155 92 chr17 72510640 72510847 -12927633 - L2 LINE L2 -455 2859 2640 206 292 240 7 chr17 72510994 72511148 -12927332 - L2 LINE L2 -1831 1483 1294 243 359 51 28 chr17 72512143 72512360 -12926120 - MIR SINE MIR 0 262 41 2561 64 0 3 chr17 72512562 72512874 -12925606 + AluY SINE Alu 1 311 0 1826 216 19 8 chr17 72513068 72513522 -12924958 - MER89 LTR ERV1 0 559 1 1633 171 117 28 chr17 72515139 72515567 -12922913 + MLT1C LTR MaLR 1 466 -1 2229 191 78 21 chr17 72515682 72516132 -12922348 + MLT2B2 LTR ERVL 2 483 -32 848 16 57 0 chr17 72516132 72516255 -12922225 + (TCTA)n Simple_repeat Simple_repeat 4 133 0 2229 191 78 21 chr17 72516255 72516290 -12922190 + MLT2B2 LTR ERVL 483 515 0 195 42 0 0 chr17 72517122 72517146 -12921334 + (TG)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr17 72519388 72519411 -12919069 + AT_rich Low_complexity Low_complexity 1 23 0 1889 156 21 29 chr17 72520245 72520585 -12917895 + MER1B DNA MER1_type 1 337 0 831 93 0 57 chr17 72520691 72520831 -12917649 - AluSg/x SINE Alu 0 312 181 2112 111 0 17 chr17 72521015 72521325 -12917155 - AluSx SINE Alu 0 305 1 188 329 91 57 chr17 72521407 72521555 -12916925 + MIR SINE MIR 46 205 -57 1927 131 0 30 chr17 72521555 72521852 -12916628 + AluSx SINE Alu 19 306 -6 188 329 91 57 chr17 72521852 72521913 -12916567 + MIR SINE MIR 205 262 0 460 285 183 5 chr17 72523270 72523456 -12915024 + MIR SINE MIR 12 230 -32 25 0 0 0 chr17 72523893 72523918 -12914562 + AT_rich Low_complexity Low_complexity 1 25 0 1135 294 121 33 chr17 72524452 72525004 -12913476 + MLT2F LTR ERVL 1 601 -62 192 211 23 23 chr17 72525004 72525010 -12913470 + (TA)n Simple_repeat Simple_repeat 1 6 -122 2001 169 27 0 chr17 72525010 72525348 -12913132 - MER7A DNA MER2_type 0 346 2 192 211 23 23 chr17 72525348 72525469 -12913011 + (TA)n Simple_repeat Simple_repeat 5 128 0 203 100 80 0 chr17 72525498 72525548 -12912932 + (TA)n Simple_repeat Simple_repeat 1 54 0 948 143 0 0 chr17 72525548 72525674 -12912806 + AluSg/x SINE Alu 157 282 -28 212 336 123 8 chr17 72525785 72525907 -12912573 - MIR3 SINE MIR -64 144 9 261 0 0 0 chr17 72526909 72526938 -12911542 + (CA)n Simple_repeat Simple_repeat 2 30 0 211 179 0 36 chr17 72527240 72527296 -12911184 + T-rich Low_complexity Low_complexity 2 55 0 23 0 0 0 chr17 72528298 72528321 -12910159 + AT_rich Low_complexity Low_complexity 1 23 0 2184 135 0 0 chr17 72528743 72529054 -12909426 + AluSx SINE Alu 2 312 0 2124 177 30 45 chr17 72529249 72529718 -12908762 + MLT2C2 LTR ERVL 1 462 -2 218 226 226 0 chr17 72530027 72530111 -12908369 + L2 LINE L2 3168 3270 -2 775 275 57 22 chr17 72531549 72531778 -12906702 + L2 LINE L2 2834 3070 -243 231 313 0 0 chr17 72531786 72531850 -12906630 + MLT1F LTR MaLR 2 65 -477 548 261 51 0 chr17 72534512 72534650 -12903830 + MIR SINE MIR 18 162 -100 900 230 34 38 chr17 72535662 72535953 -12902527 + MER58B DNA MER1_type 37 326 -15 26 74 0 0 chr17 72536128 72536182 -12902298 + AT_rich Low_complexity Low_complexity 1 54 0 25 0 0 0 chr17 72536298 72536323 -12902157 + AT_rich Low_complexity Low_complexity 1 25 0 721 193 0 0 chr17 72536333 72536447 -12902033 - FLAM_A SINE Alu -19 114 1 251 289 13 13 chr17 72538433 72538509 -12899971 + CT-rich Low_complexity Low_complexity 2 77 0 391 299 75 46 chr17 72539170 72539344 -12899136 + MIR3 SINE MIR 3 181 -27 318 330 0 18 chr17 72539399 72539508 -12898972 + L2 LINE L2 3207 3313 0 209 119 24 0 chr17 72540225 72540267 -12898213 + (CA)n Simple_repeat Simple_repeat 1 43 0 180 0 0 0 chr17 72541216 72541236 -12897244 + (CA)n Simple_repeat Simple_repeat 2 21 0 2426 70 7 0 chr17 72541953 72542253 -12896227 + AluY SINE Alu 1 302 -9 1727 159 15 0 chr17 72542348 72542618 -12895862 + AluJo SINE Alu 1 274 -38 32 57 0 0 chr17 72542624 72542677 -12895803 + AT_rich Low_complexity Low_complexity 1 53 0 243 119 0 0 chr17 72544041 72544056 -12894424 + (GAAAA)n Simple_repeat Simple_repeat 4 18 -27 2136 107 6 19 chr17 72544056 72544373 -12894107 + AluSp SINE Alu 1 313 0 243 119 0 0 chr17 72544373 72544399 -12894081 + (GAAAA)n Simple_repeat Simple_repeat 17 45 0 366 42 0 0 chr17 72544837 72544885 -12893595 + (TA)n Simple_repeat Simple_repeat 2 49 0 825 62 15 15 chr17 72545064 72545194 -12893286 + (GAAA)n Simple_repeat Simple_repeat 2 131 0 720 160 0 17 chr17 72545775 72545894 -12892586 + FLAM_C SINE Alu 1 117 -26 710 130 30 53 chr17 72545899 72546030 -12892450 - FRAM SINE Alu -8 168 41 2380 94 0 0 chr17 72546067 72546374 -12892106 - AluY SINE Alu -4 307 1 1019 194 17 0 chr17 72546388 72546568 -12891912 + AluJb SINE Alu 130 312 0 464 339 40 6 chr17 72547349 72547523 -12890957 + MIR3 SINE MIR 22 201 -7 290 172 31 0 chr17 72548238 72548302 -12890178 + (TATATG)n Simple_repeat Simple_repeat 1 66 0 447 313 73 16 chr17 72548867 72549059 -12889421 - MIR SINE MIR 0 262 60 2292 52 3 14 chr17 72549934 72550274 -12888206 - AluY SINE Alu 0 311 4 34 0 0 0 chr17 72550563 72550597 -12887883 + AT_rich Low_complexity Low_complexity 1 34 0 2009 124 10 3 chr17 72550600 72550890 -12887590 - AluSq SINE Alu -21 292 1 189 0 0 0 chr17 72551574 72551595 -12886885 + (TTTTA)n Simple_repeat Simple_repeat 4 24 0 243 320 51 115 chr17 72551916 72552169 -12886311 + L2 LINE L2 3032 3268 -4 898 225 127 35 chr17 72552264 72552579 -12885901 - MER2 DNA MER2_type 0 344 1 198 0 0 0 chr17 72553922 72553944 -12884536 + (CCA)n Simple_repeat Simple_repeat 1 22 0 2700 163 48 98 chr17 72554638 72555349 -12883131 + LTR8 LTR ERV1 1 675 -16 1870 180 49 96 chr17 72555359 72555869 -12882611 + L1MC1 LINE L1 85 570 -5856 6059 162 22 4 chr17 72555876 72556937 -12881543 + L1MC1 LINE L1 5534 6613 0 240 257 14 14 chr17 72557060 72557130 -12881350 + MIR3 SINE MIR 100 169 -39 264 332 35 90 chr17 72557837 72558126 -12880354 + L2 LINE L2 2985 3257 -15 1748 164 3 17 chr17 72558812 72559104 -12879376 - AluSx SINE Alu -20 292 5 867 283 8 20 chr17 72559305 72559549 -12878931 - MIR SINE MIR -4 258 18 181 146 0 55 chr17 72559635 72559690 -12878790 + (TAAAAA)n Simple_repeat Simple_repeat 3 54 0 228 160 20 20 chr17 72559848 72559898 -12878582 - L1ME4a LINE L1 -593 5591 5542 582 281 36 42 chr17 72559900 72560118 -12878362 + L1ME4a LINE L1 5578 5795 -326 1009 203 0 78 chr17 72560118 72560360 -12878120 + MER58A DNA MER1_type 2 224 0 582 281 36 42 chr17 72560360 72560447 -12878033 + L1ME4a LINE L1 5795 5881 -240 741 166 0 50 chr17 72561159 72561298 -12877182 - FLAM_A SINE Alu -1 132 1 25 31 0 0 chr17 72561407 72561439 -12877041 + AT_rich Low_complexity Low_complexity 1 32 0 894 224 9 4 chr17 72562377 72562609 -12875871 - Charlie5 DNA MER1_type 0 2623 2391 515 183 62 4 chr17 72562807 72562922 -12875558 - MER33 DNA MER1_type -260 64 1 374 271 195 14 chr17 72562971 72563192 -12875288 - MIR SINE MIR 0 262 2 391 262 41 41 chr17 72563382 72563527 -12874953 + L2 LINE L2 3169 3313 0 242 384 61 20 chr17 72563588 72564044 -12874436 - L2 LINE L2 -1048 2266 1792 2337 82 3 22 chr17 72564840 72565156 -12873324 + AluSp SINE Alu 4 313 0 30 27 0 0 chr17 72565545 72565582 -12872898 + AT_rich Low_complexity Low_complexity 1 37 0 486 306 50 55 chr17 72565822 72566165 -12872315 - L2 LINE L2 -1543 1771 1431 1339 148 72 24 chr17 72567686 72567976 -12870504 + L1MA8 LINE L1 5968 6271 -20 397 247 11 11 chr17 72568152 72568245 -12870235 - MER5A DNA MER1_type -83 106 14 2100 102 0 75 chr17 72568589 72568923 -12869557 + AluSx SINE Alu 1 309 -3 3208 214 36 14 chr17 72569528 72570302 -12868178 - L1MB8 LINE L1 -47 6131 5341 2101 131 0 3 chr17 72570431 72570729 -12867751 + AluSq SINE Alu 1 297 -16 229 359 55 16 chr17 72571941 72572069 -12866411 - MIR SINE MIR -110 152 20 25 51 0 0 chr17 72572123 72572162 -12866318 + AT_rich Low_complexity Low_complexity 1 39 0 2583 37 0 0 chr17 72572941 72573239 -12865241 + AluY SINE Alu 1 298 -13 449 62 15 0 chr17 72573453 72573518 -12864962 + (TA)n Simple_repeat Simple_repeat 1 66 0 511 285 77 121 chr17 72573565 72574095 -12864385 + L2 LINE L2 2806 3312 -1 2365 133 22 5 chr17 72575970 72576339 -12862141 + THE1C LTR MaLR 1 375 0 2194 138 30 25 chr17 72576406 72576768 -12861712 + THE1B LTR MaLR 1 364 0 386 244 57 32 chr17 72577070 72577193 -12861287 + LTR67 LTR ERVL 427 552 -5 1464 331 22 34 chr17 72578585 72579208 -12859272 + L1PA13 LINE L1 2 617 -6170 8063 236 17 26 chr17 72579289 72582432 -12856048 + L1PA13 LINE L1 1324 4493 -2304 2872 172 7 4 chr17 72582431 72582972 -12855508 - L1P4 LINE L1 -867 5279 4737 * 3114 105 48 6 chr17 72582967 72583445 -12855035 + L1P4 LINE L1 5254 5751 -410 225 0 0 0 chr17 72583767 72583792 -12854688 + (A)n Simple_repeat Simple_repeat 1 25 0 2473 65 0 3 chr17 72584539 72584846 -12853634 + AluY SINE Alu 1 306 -5 244 395 0 0 chr17 72585395 72585481 -12852999 - MIR3 SINE MIR -36 172 87 557 278 6 25 chr17 72586549 72586711 -12851769 - MIR3 SINE MIR -6 202 44 478 332 61 2 chr17 72587195 72587415 -12851065 + MIR SINE MIR 32 262 0 1848 112 0 8 chr17 72587425 72587675 -12850805 - AluSg SINE Alu -24 286 39 1382 201 0 38 chr17 72588220 72588538 -12849942 + L1MC3 LINE L1 7479 7784 -1 1333 89 0 84 chr17 72588545 72588748 -12849732 - AluSq SINE Alu -125 188 3 638 121 0 0 chr17 72588748 72588869 -12849611 + AluSg/x SINE Alu 190 310 0 633 219 76 57 chr17 72589363 72589573 -12848907 + MER20 DNA MER1_type 2 215 -4 2291 105 0 0 chr17 72589615 72589919 -12848561 - AluSx SINE Alu -8 304 1 341 378 42 33 chr17 72590256 72590587 -12847893 + LTR16C LTR ERVL 156 489 -2 344 58 0 19 chr17 72590682 72590734 -12847746 + (TAA)n Simple_repeat Simple_repeat 1 51 0 243 287 213 0 chr17 72590760 72590854 -12847626 - MIR SINE MIR -125 137 24 288 221 0 0 chr17 72591137 72591214 -12847266 + (TG)n Simple_repeat Simple_repeat 1 77 0 457 345 48 14 chr17 72591650 72591859 -12846621 - MIR SINE MIR -6 256 41 242 349 109 23 chr17 72592174 72592349 -12846131 + L2 LINE L2 2782 2971 -343 2326 289 23 28 chr17 72592479 72593164 -12845316 + MER115 DNA AcHobo 12 693 0 249 356 17 34 chr17 72593165 72593283 -12845197 + L2 LINE L2 2948 3063 -250 26 50 0 0 chr17 72593473 72593513 -12844967 + AT_rich Low_complexity Low_complexity 1 40 0 369 331 122 67 chr17 72595051 72595650 -12842830 + L1MEd LINE L1 122 753 -5366 21 0 0 0 chr17 72595731 72595752 -12842728 + AT_rich Low_complexity Low_complexity 1 21 0 479 285 25 37 chr17 72595840 72596082 -12842398 + L1MEd LINE L1 973 1211 -4908 386 286 56 31 chr17 72596160 72596356 -12842124 + L1ME LINE L1 52 252 -5818 703 258 86 10 chr17 72596357 72596648 -12841832 + L1M4 LINE L1 4967 5279 -867 443 250 8 8 chr17 72596654 72596786 -12841694 - L1M4 LINE L1 -2683 3463 3332 1936 163 56 56 chr17 72596846 72597258 -12841222 - MSTB LTR MaLR 0 426 15 8037 192 34 4 chr17 72597290 72598848 -12839632 - MSTB-int LTR MaLR 0 1651 1 2134 175 67 5 chr17 72598857 72599246 -12839234 - MSTB LTR MaLR -13 413 1 1243 188 34 111 chr17 72599264 72599348 -12839132 + L1M4 LINE L1 2703 2792 -3354 1628 112 120 11 chr17 72599348 72599624 -12838856 - AluSq SINE Alu -3 310 5 1243 188 34 111 chr17 72599624 72600124 -12838356 + L1M4 LINE L1 2792 3242 -2904 1103 269 65 31 chr17 72600233 72600404 -12838076 + L1M4 LINE L1 4518 4682 -1464 270 0 0 0 chr17 72600404 72600434 -12838046 + (TA)n Simple_repeat Simple_repeat 2 31 0 1103 269 65 31 chr17 72600434 72600771 -12837709 + L1M4 LINE L1 4682 5043 -1103 187 371 87 17 chr17 72601078 72601366 -12837114 + L2 LINE L2 2264 2571 -743 185 385 45 39 chr17 72601598 72601754 -12836726 + L2 LINE L2 2940 3096 -176 192 274 78 0 chr17 72601880 72601931 -12836549 + L2 LINE L2 3214 3268 -4 499 291 86 21 chr17 72602282 72602562 -12835918 - MLT1J LTR MaLR -144 306 36 2173 108 0 3 chr17 72603690 72603977 -12834503 + AluSq SINE Alu 1 286 -27 300 91 0 0 chr17 72603978 72604022 -12834458 + (CA)n Simple_repeat Simple_repeat 2 45 0 354 169 0 0 chr17 72604023 72604088 -12834392 + (TA)n Simple_repeat Simple_repeat 2 66 0 1817 229 42 25 chr17 72604089 72604560 -12833920 + MLT1D LTR MaLR 24 502 -3 241 325 0 13 chr17 72605181 72605258 -12833222 + L2 LINE L2 3238 3313 0 824 196 7 13 chr17 72605449 72605602 -12832878 + AluJb SINE Alu 137 288 -24 682 42 0 21 chr17 72605606 72605702 -12832778 + (GGAA)n Simple_repeat Simple_repeat 3 96 0 2149 222 140 14 chr17 72605866 72606510 -12831970 - L1ME1 LINE L1 -1 6165 5441 304 317 20 0 chr17 72607505 72607606 -12830874 + L1MC4 LINE L1 6607 6709 -1333 276 77 0 0 chr17 72607606 72607645 -12830835 + (CA)n Simple_repeat Simple_repeat 1 39 0 275 0 29 0 chr17 72607752 72607787 -12830693 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1971 117 25 0 chr17 72607787 72608061 -12830419 - AluSp SINE Alu -32 281 1 205 335 80 46 chr17 72608652 72608891 -12829589 + L2 LINE L2 2230 2476 -838 495 296 17 34 chr17 72609415 72609594 -12828886 - MER5A DNA MER1_type -13 176 1 269 322 151 0 chr17 72609749 72609901 -12828579 + MIR SINE MIR 88 262 0 2065 121 0 0 chr17 72610093 72610418 -12828062 + AluSg SINE Alu 1 325 0 305 273 65 11 chr17 72610630 72610736 -12827744 - MIR SINE MIR -68 140 28 864 275 112 58 chr17 72612113 72612597 -12825883 - LTR33 LTR ERVL -2 519 10 825 215 13 0 chr17 72612839 72612997 -12825483 + MLT1E LTR MaLR 1 160 -433 1006 306 34 21 chr17 72613000 72613327 -12825153 + MLT1E LTR MaLR 119 449 -144 452 242 8 0 chr17 72613353 72613473 -12825007 - L1MA9 LINE L1 0 6312 6192 1552 154 16 38 chr17 72613473 72613515 -12824965 - MSTA LTR MaLR 0 426 385 1857 147 13 16 chr17 72613515 72613827 -12824653 + AluSx SINE Alu 1 311 -1 1552 154 16 38 chr17 72613827 72614171 -12824309 - MSTA LTR MaLR -41 385 1 2132 130 38 14 chr17 72614172 72614205 -12824275 - L1MA9 LINE L1 -123 6189 6158 261 0 0 0 chr17 72614205 72614234 -12824246 + (TG)n Simple_repeat Simple_repeat 1 29 0 2132 130 38 14 chr17 72614234 72614570 -12823910 - L1MA9 LINE L1 -154 6158 5811 681 225 80 0 chr17 72614571 72614722 -12823758 + MLT1E LTR MaLR 492 654 0 285 305 51 40 chr17 72614873 72615050 -12823430 - MIR SINE MIR -82 180 2 411 334 65 15 chr17 72616536 72616758 -12821722 + MIR SINE MIR 35 262 0 291 239 43 43 chr17 72616977 72617069 -12821411 + LTR29 LTR ERV1 5 96 -526 3433 142 56 26 chr17 72617103 72617151 -12821329 + LTR29 LTR ERV1 1 46 -576 3617 160 55 13 chr17 72617151 72617837 -12820643 + LTR62 LTR ERVK 3 717 -2 3433 142 56 26 chr17 72617837 72618392 -12820088 + LTR29 LTR ERV1 46 622 0 4168 183 93 35 chr17 72618398 72619294 -12819186 + LTR29-int LTR ERV1 5 1069 -5262 216 0 0 0 chr17 72619294 72619318 -12819162 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 4168 183 93 35 chr17 72619318 72619956 -12818524 + LTR29-int LTR ERV1 1069 1669 -4662 420 92 46 58 chr17 72619957 72620131 -12818349 + (TA)n Simple_repeat Simple_repeat 1 172 0 228 184 0 0 chr17 72620250 72620299 -12818181 + (CA)n Simple_repeat Simple_repeat 2 50 0 2239 132 28 6 chr17 72620421 72620777 -12817703 - THE1B LTR MaLR 0 364 1 5018 98 10 6 chr17 72620777 72621458 -12817022 - THE1B-int LTR MaLR 0 1580 897 5181 112 18 4 chr17 72621458 72622243 -12816237 - L1MA2 LINE L1 -62 6242 5447 1397 143 0 4 chr17 72622223 72622558 -12815922 + L1MA2 LINE L1 5131 5464 -743 * 631 149 9 0 chr17 72622606 72622713 -12815767 - HY1 scRNA scRNA -4 108 1 4925 253 30 26 chr17 72622716 72623847 -12814633 - L1M4 LINE L1 -837 5309 4168 1776 158 49 74 chr17 72623847 72624252 -12814228 + MSTD LTR MaLR 2 396 0 4925 253 30 26 chr17 72624252 72624902 -12813578 - L1M4 LINE L1 -1978 4168 3522 250 326 76 7 chr17 72624904 72625048 -12813432 + L2 LINE L2 2139 2292 -1022 1373 181 55 106 chr17 72625119 72625523 -12812957 - MLT1B LTR MaLR -7 383 1 653 320 50 61 chr17 72625550 72625990 -12812490 + L2 LINE L2 2879 3313 0 1016 198 5 36 chr17 72627935 72628157 -12810323 + MER20 DNA MER1_type 5 219 0 234 62 0 0 chr17 72628473 72628505 -12809975 + (T)n Simple_repeat Simple_repeat 1 32 0 26 0 0 0 chr17 72629578 72629604 -12808876 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr17 72631574 72631597 -12806883 + AT_rich Low_complexity Low_complexity 1 23 0 278 115 19 0 chr17 72632856 72632908 -12805572 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 551 328 17 6 chr17 72632914 72633094 -12805386 - MIR SINE MIR -68 194 13 1741 183 48 3 chr17 72633172 72633505 -12804975 - MER7A DNA MER2_type 0 346 1 199 313 146 0 chr17 72633505 72633601 -12804879 + L2 LINE L2 3169 3278 -35 2197 202 34 10 chr17 72633720 72634245 -12804235 + MLT1F1 LTR MaLR 7 562 -5 252 199 87 79 chr17 72634263 72634455 -12804025 + MLT1F1-int LTR MaLR 17 214 -1157 642 318 177 7 chr17 72634728 72635027 -12803453 + MLT1I LTR MaLR 60 409 0 2290 113 30 24 chr17 72635295 72635668 -12802812 + THE1C LTR MaLR 1 375 0 253 246 261 0 chr17 72637842 72637984 -12800496 - MIR SINE MIR -26 236 58 319 348 116 0 chr17 72638035 72638216 -12800264 - L1ME4a LINE L1 -195 5926 5725 2183 88 0 73 chr17 72641009 72641337 -12797143 - AluSq SINE Alu -9 304 1 244 327 105 52 chr17 72641565 72641718 -12796762 + L2 LINE L2 3112 3272 0 597 280 66 11 chr17 72641915 72641967 -12796513 + MLT1J2 LTR MaLR 1 49 -401 270 0 0 0 chr17 72641967 72641997 -12796483 + (CA)n Simple_repeat Simple_repeat 1 30 0 597 280 66 11 chr17 72641997 72642126 -12796354 + MLT1J2 LTR MaLR 49 192 -258 360 133 0 0 chr17 72643244 72643304 -12795176 + (TG)n Simple_repeat Simple_repeat 2 61 0 1030 299 107 10 chr17 72643507 72643891 -12794589 + MLT1J2 LTR MaLR 3 423 -27 1910 195 33 51 chr17 72643896 72644408 -12794072 + MLT1D LTR MaLR 3 505 0 1960 90 7 68 chr17 72644765 72645075 -12793405 + AluSp SINE Alu 1 291 -22 180 0 0 0 chr17 72645852 72645872 -12792608 + (A)n Simple_repeat Simple_repeat 1 20 0 1275 291 47 2 chr17 72647716 72648125 -12790355 + LTR16A LTR ERVL 18 444 -6 318 214 97 19 chr17 72648990 72649093 -12789387 + MIR SINE MIR 87 197 -65 770 240 10 10 chr17 72649777 72649977 -12788503 - L1MB7 LINE L1 -54 6130 5931 191 286 126 89 chr17 72650260 72650529 -12787951 + L2 LINE L2 2990 3268 -4 22 35 0 0 chr17 72650756 72650785 -12787695 + AT_rich Low_complexity Low_complexity 1 29 0 210 238 38 25 chr17 72651508 72651588 -12786892 + T-rich Low_complexity Low_complexity 1 81 0 267 31 0 0 chr17 72651603 72651635 -12786845 + (TG)n Simple_repeat Simple_repeat 2 33 0 * 369 0 0 0 chr17 72651634 72651675 -12786805 + (TA)n Simple_repeat Simple_repeat 1 41 0 1314 96 0 0 chr17 72651675 72651842 -12786638 - AluSg/x SINE Alu -13 299 133 2118 111 30 48 chr17 72651987 72652321 -12786159 - THE1B LTR MaLR -36 328 1 1359 178 0 4 chr17 72652324 72652566 -12785914 - L1PB4 LINE L1 -7 6149 5909 688 208 0 15 chr17 72652581 72652711 -12785769 - FLAM_C SINE Alu -5 128 1 2106 163 39 35 chr17 72652743 72653291 -12785189 + MLT2A2 LTR ERVL 1 554 0 1355 97 92 0 chr17 72653293 72653499 -12784981 - L1P5 LINE L1 -387 5769 5545 630 183 0 14 chr17 72653488 72653630 -12784850 + L1 LINE L1 4536 4675 -1471 * 268 331 40 20 chr17 72653969 72654120 -12784360 - MIR SINE MIR -3 259 106 743 251 34 19 chr17 72654134 72654341 -12784139 - MIR SINE MIR -38 224 15 211 93 47 0 chr17 72654510 72654553 -12783927 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 35 0 0 0 chr17 72654679 72654714 -12783766 + AT_rich Low_complexity Low_complexity 1 35 0 2186 108 3 10 chr17 72655347 72655653 -12782827 + AluSc SINE Alu 1 304 -5 639 224 40 8 chr17 72655882 72656007 -12782473 + MER45A DNA AcHobo 1 129 -49 201 74 0 0 chr17 72656009 72656036 -12782444 + (TC)n Simple_repeat Simple_repeat 2 28 0 235 344 10 21 chr17 72656211 72656307 -12782173 + MIR3 SINE MIR 91 185 -23 621 178 9 0 chr17 72656312 72656417 -12782063 + MLT1J2 LTR MaLR 1 106 -344 2121 161 18 31 chr17 72656417 72656807 -12781673 - MLT1B LTR MaLR 0 390 6 844 291 53 28 chr17 72656813 72657132 -12781348 + MLT1J2 LTR MaLR 103 429 -21 225 65 0 0 chr17 72659172 72659203 -12779277 + (GTTTG)n Simple_repeat Simple_repeat 2 32 0 182 278 46 119 chr17 72659385 72659536 -12778944 + MIR SINE MIR 67 206 -56 25 31 0 0 chr17 72659565 72659597 -12778883 + AT_rich Low_complexity Low_complexity 1 32 0 448 134 0 24 chr17 72659765 72659847 -12778633 - MADE1 DNA Mariner 0 80 1 796 189 0 11 chr17 72660157 72660337 -12778143 + CT-rich Low_complexity Low_complexity 3 180 0 192 40 0 0 chr17 72660352 72660377 -12778103 + (A)n Simple_repeat Simple_repeat 1 25 0 1316 128 200 20 chr17 72661208 72661458 -12777022 + AluSg1 SINE Alu 1 295 -14 621 115 0 0 chr17 72661458 72661554 -12776926 + (GGA)n Simple_repeat Simple_repeat 2 97 0 2038 130 0 26 chr17 72661967 72662274 -12776206 + AluSx SINE Alu 1 299 -13 217 266 25 0 chr17 72663160 72663239 -12775241 + CT-rich Low_complexity Low_complexity 3 83 0 1095 280 151 11 chr17 72663266 72663723 -12774757 - L1ME3A LINE L1 -59 6111 5591 490 263 36 52 chr17 72663788 72664039 -12774441 - L1ME3A LINE L1 -941 5205 4959 410 263 266 15 chr17 72664219 72664478 -12774002 + MER110 LTR ERV1 166 489 -2 894 248 137 14 chr17 72664530 72665026 -12773454 - L1ME3A LINE L1 -1240 4906 4350 913 197 30 105 chr17 72665335 72665696 -12772784 - LTR37A LTR ERV1 0 426 93 357 279 77 10 chr17 72665816 72665920 -12772560 + MIR SINE MIR 82 192 -70 231 36 0 0 chr17 72666267 72666295 -12772185 + (TTTAA)n Simple_repeat Simple_repeat 4 31 0 252 267 0 22 chr17 72666974 72667064 -12771416 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 2122 108 3 20 chr17 72667403 72667708 -12770772 + AluSq SINE Alu 1 300 -13 3894 182 35 11 chr17 72667712 72668520 -12769960 - MSTA-int LTR MaLR -793 858 1 2307 135 24 14 chr17 72668520 72668890 -12769590 - MSTA LTR MaLR 0 428 55 964 183 0 6 chr17 72669007 72669261 -12769219 + AluJb SINE Alu 1 302 -10 239 415 0 8 chr17 72669577 72669695 -12768785 - L3 LINE CR1 -68 1509 1393 348 347 40 27 chr17 72670665 72670714 -12767766 + L2 LINE L2 2933 2980 -292 1393 183 20 52 chr17 72670714 72670881 -12767599 - AluJo SINE Alu -16 296 142 270 0 0 0 chr17 72670881 72670911 -12767569 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1393 183 20 52 chr17 72670911 72671049 -12767431 - AluJo SINE Alu -170 142 1 348 347 40 27 chr17 72671049 72671149 -12767331 + L2 LINE L2 2980 3084 -188 1173 179 4 39 chr17 72671226 72671455 -12767025 - AluJo SINE Alu -7 305 85 1912 110 122 42 chr17 72672013 72672350 -12766130 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr17 72672668 72672688 -12765792 + (T)n Simple_repeat Simple_repeat 1 20 0 282 324 78 0 chr17 72673386 72673488 -12764992 - MIR3 SINE MIR -7 201 92 1763 164 0 7 chr17 72673520 72673795 -12764685 + AluJo SINE Alu 1 273 -39 1149 176 14 27 chr17 72674350 72674571 -12763909 + MER20 DNA MER1_type 1 218 -1 586 170 20 0 chr17 72674597 72674697 -12763783 - L1MA10 LINE L1 -267 5922 5821 1769 161 38 30 chr17 72674697 72675094 -12763386 + L1MA10 LINE L1 5931 6330 -4 1595 153 94 53 chr17 72675892 72676252 -12762228 - THE1C LTR MaLR 0 375 1 516 258 5 81 chr17 72676965 72677151 -12761329 + MER5B DNA MER1_type 1 172 -6 291 326 135 21 chr17 72677169 72677362 -12761118 + MIR SINE MIR 32 246 -16 2456 69 0 3 chr17 72677919 72678222 -12760258 - AluY SINE Alu -9 302 1 702 272 46 5 chr17 72678625 72678820 -12759660 + MER58A DNA MER1_type 22 224 0 21 0 0 0 chr17 72678934 72678955 -12759525 + AT_rich Low_complexity Low_complexity 1 21 0 1095 212 90 81 chr17 72680315 72680346 -12758134 - MLT2D LTR ERVL 0 414 385 282 29 0 0 chr17 72680346 72680381 -12758099 + (TG)n Simple_repeat Simple_repeat 2 36 0 1095 212 90 81 chr17 72680381 72680759 -12757721 - MLT2D LTR ERVL -29 385 1 1004 33 0 0 chr17 72681233 72681394 -12757086 + L1PA4 LINE L1 6032 6192 0 202 363 71 26 chr17 72681475 72681588 -12756892 + L2 LINE L2 3155 3272 0 805 240 57 31 chr17 72682558 72682875 -12755605 + L1ME1 LINE L1 5046 5370 -776 * 8136 27 0 0 chr17 72682873 72683828 -12754652 - L1PA3 LINE L1 -1681 4465 3511 7786 30 1 8 chr17 72683828 72685531 -12752949 + L1PA3 LINE L1 4456 6152 -3 2226 226 40 62 chr17 72685537 72685664 -12752816 + L1ME1 LINE L1 5350 5478 -688 1911 147 6 16 chr17 72685664 72685976 -12752504 + AluSx SINE Alu 1 309 -3 2226 226 40 62 chr17 72685976 72686639 -12751841 + L1ME1 LINE L1 5478 6123 -43 441 276 110 47 chr17 72687714 72688318 -12750162 + L1MCc LINE L1 1275 2135 -4888 5762 90 9 4 chr17 72688350 72689150 -12749330 - L1PA13 LINE L1 0 6163 5360 614 291 79 64 chr17 72689150 72689620 -12748860 + L1MCc LINE L1 2164 2640 -4482 221 159 0 23 chr17 72689624 72689668 -12748812 + (TAAG)n Simple_repeat Simple_repeat 1 43 0 2152 127 0 25 chr17 72689921 72690235 -12748245 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr17 72690853 72690877 -12747603 + AT_rich Low_complexity Low_complexity 1 24 0 350 319 42 8 chr17 72692060 72692179 -12746301 - MIR SINE MIR -117 145 23 646 131 12 155 chr17 72692907 72692969 -12745511 - L1MA4 LINE L1 -7 6293 6224 779 178 0 15 chr17 72692969 72693104 -12745376 - FLAM_C SINE Alu 0 133 1 646 131 12 155 chr17 72693104 72693209 -12745271 - L1MA4 LINE L1 -76 6224 6150 180 290 130 30 chr17 72693299 72693468 -12745012 + MIR SINE MIR 51 236 -26 1925 193 33 51 chr17 72694194 72694706 -12743774 - MLT1D LTR MaLR 0 505 3 1030 299 107 10 chr17 72694711 72695095 -12743385 - MLT1J2 LTR MaLR -27 423 3 309 155 0 0 chr17 72695298 72695356 -12743124 + (CA)n Simple_repeat Simple_repeat 2 59 0 597 280 66 11 chr17 72696474 72696603 -12741877 - MLT1J2 LTR MaLR -258 192 49 288 0 0 0 chr17 72696603 72696635 -12741845 + (TG)n Simple_repeat Simple_repeat 1 32 0 597 280 66 11 chr17 72696635 72696687 -12741793 - MLT1J2 LTR MaLR -401 49 1 244 327 105 52 chr17 72696884 72697037 -12741443 - L2 LINE L2 0 3272 3112 2202 88 0 73 chr17 72697265 72697594 -12740886 + AluSq SINE Alu 1 305 -8 319 348 116 0 chr17 72700386 72700567 -12737913 + L1ME4a LINE L1 5725 5926 -195 253 246 261 0 chr17 72700618 72700760 -12737720 + MIR SINE MIR 58 236 -26 2290 113 30 24 chr17 72702934 72703307 -12735173 - THE1C LTR MaLR 0 375 1 642 318 177 7 chr17 72703575 72703874 -12734606 - MLT1I LTR MaLR 0 409 60 252 199 87 79 chr17 72704147 72704339 -12734141 - MLT1F1-int LTR MaLR -1157 214 17 2197 202 34 10 chr17 72704357 72704882 -12733598 - MLT1F1 LTR MaLR -5 562 7 199 313 146 0 chr17 72705001 72705097 -12733383 - L2 LINE L2 -35 3278 3169 1741 183 48 3 chr17 72705097 72705430 -12733050 + MER7A DNA MER2_type 1 346 0 551 328 17 6 chr17 72705508 72705688 -12732792 + MIR SINE MIR 13 194 -68 278 115 19 0 chr17 72705694 72705746 -12732734 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 23 0 0 0 chr17 72707004 72707027 -12731453 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr17 72708995 72709021 -12729459 + AT_rich Low_complexity Low_complexity 1 26 0 234 62 0 0 chr17 72710095 72710127 -12728353 + (A)n Simple_repeat Simple_repeat 1 32 0 1107 198 5 36 chr17 72710440 72710662 -12727818 - MER20 DNA MER1_type 0 219 5 568 281 39 71 chr17 72712607 72712917 -12725563 - L2 LINE L2 0 3313 3014 2256 99 7 0 chr17 72713038 72713330 -12725150 + AluSx SINE Alu 14 307 -5 584 239 4 4 chr17 72713434 72713664 -12724816 + CT-rich Low_complexity Low_complexity 1 230 0 207 287 35 78 chr17 72713687 72713802 -12724678 - L2 LINE L2 -42 3271 3162 1727 172 17 0 chr17 72714201 72714492 -12723988 - AluJb SINE Alu -14 298 3 489 329 6 12 chr17 72714749 72714919 -12723561 - L3 LINE CR1 -258 1319 1151 868 90 0 0 chr17 72716407 72716518 -12721962 + AluY SINE Alu 1 111 -200 415 197 13 20 chr17 72716850 72717002 -12721478 + (TA)n Simple_repeat Simple_repeat 2 152 0 233 196 0 0 chr17 72717045 72717091 -12721389 - LTR66 LTR ERVL -171 439 394 510 147 0 0 chr17 72717116 72717191 -12721289 - AluSg/x SINE Alu -72 238 164 429 229 0 0 chr17 72717206 72717311 -12721169 + (TA)n Simple_repeat Simple_repeat 1 105 0 1811 80 0 4 chr17 72717357 72717583 -12720897 + AluSx SINE Alu 31 255 -57 22 0 0 0 chr17 72717631 72717653 -12720827 + AT_rich Low_complexity Low_complexity 1 22 0 1031 103 13 13 chr17 72717664 72717819 -12720661 - AluSg/x SINE Alu 0 312 158 408 252 98 0 chr17 72717821 72717944 -12720536 + MIR SINE MIR 112 246 -16 1918 136 0 57 chr17 72717948 72718265 -12720215 - AluSx SINE Alu -5 307 9 2255 91 0 0 chr17 72718314 72718601 -12719879 - AluSg SINE Alu -19 291 5 241 211 19 0 chr17 72718659 72718711 -12719769 + L2 LINE L2 3261 3313 0 182 261 0 22 chr17 72719043 72719089 -12719391 - L2 LINE L2 -4 3309 3265 2234 127 7 3 chr17 72719202 72719510 -12718970 - AluSq SINE Alu -4 309 1 1874 117 15 62 chr17 72719582 72719907 -12718573 + AluSx SINE Alu 1 310 -2 2062 128 26 7 chr17 72721351 72721657 -12716823 - AluSx SINE Alu 0 312 1 285 406 42 6 chr17 72721786 72721951 -12716529 + L2 LINE L2 2524 2694 -620 261 333 112 38 chr17 72721976 72722243 -12716237 - L2 LINE L2 -36 3277 2991 1228 55 0 0 chr17 72722261 72722406 -12716074 + MER107 DNA MER1_type 1 145 -52 197 83 28 0 chr17 72722406 72722442 -12716038 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 241 342 87 38 chr17 72722455 72722639 -12715841 - L2 LINE L2 -340 2974 2782 1119 229 123 44 chr17 72722673 72723039 -12715441 - MLT1E2 LTR MaLR -231 395 1 1989 148 0 10 chr17 72723075 72723386 -12715094 + AluSg SINE Alu 3 310 0 1854 139 3 33 chr17 72723504 72723805 -12714675 + AluJb SINE Alu 1 292 -20 384 255 133 11 chr17 72724073 72724261 -12714219 - L2 LINE L2 -1733 1581 1371 299 291 58 10 chr17 72724550 72724653 -12713827 + L2 LINE L2 3204 3311 -2 2408 180 21 7 chr17 72724841 72725313 -12713167 + L1PA16 LINE L1 5723 6200 0 383 208 10 10 chr17 72725782 72725878 -12712602 + L1PA16 LINE L1 6061 6156 -10 3471 164 29 7 chr17 72725935 72726291 -12712189 + MER6A DNA MER2_type 1 377 -488 1886 153 0 26 chr17 72726291 72726598 -12711882 - AluJb SINE Alu -13 299 1 3471 164 29 7 chr17 72726598 72726833 -12711647 + MER6A DNA MER2_type 377 605 0 646 254 53 46 chr17 72726840 72727163 -12711317 + L1ME4a LINE L1 5793 6117 -4 376 274 10 0 chr17 72727893 72727995 -12710485 - MER94 DNA DNA -12 122 20 2697 33 0 0 chr17 72728756 72729059 -12709421 - AluY SINE Alu -8 303 1 518 222 20 116 chr17 72729234 72729527 -12708953 + MLT1L LTR MaLR 8 272 -343 770 195 78 130 chr17 72729608 72729978 -12708502 + L1MC4 LINE L1 6530 6880 -1162 1277 331 25 20 chr17 72730008 72730570 -12707910 - ERVL LTR ERVL -1103 4661 4097 287 298 69 8 chr17 72730709 72730840 -12707640 - LTR16C LTR ERVL -26 465 327 251 307 23 11 chr17 72731256 72731344 -12707136 + MIR SINE MIR 60 148 -114 2097 112 30 3 chr17 72732020 72732316 -12706164 - AluSq SINE Alu -9 304 1 23 0 0 0 chr17 72732799 72732822 -12705658 + AT_rich Low_complexity Low_complexity 1 23 0 1788 138 135 3 chr17 72732860 72733179 -12705301 + MER46B DNA MER2_type 1 236 0 1855 96 14 75 chr17 72733297 72733589 -12704891 - AluSx SINE Alu 0 312 39 28 29 0 0 chr17 72734363 72734398 -12704082 + AT_rich Low_complexity Low_complexity 1 35 0 3557 134 14 39 chr17 72734573 72735085 -12703395 - L1MB2 LINE L1 -3 6168 5671 2174 187 20 20 chr17 72735085 72735475 -12703005 - MLT1B LTR MaLR 0 390 1 3557 134 14 39 chr17 72735475 72735553 -12702927 - L1MB2 LINE L1 -500 5671 5593 1046 265 96 40 chr17 72736021 72736492 -12701988 - L1MC4a LINE L1 -1779 6029 5533 5605 192 36 22 chr17 72736610 72738714 -12699766 + L1MB8 LINE L1 4046 6172 -6 312 293 0 28 chr17 72740925 72741031 -12697449 + MIR SINE MIR 160 262 0 5212 128 78 12 chr17 72741561 72742510 -12695970 + L1PA16 LINE L1 5153 6154 -12 2433 100 3 0 chr17 72742530 72742839 -12695641 + AluSq SINE Alu 1 310 -3 258 224 0 0 chr17 72744170 72744228 -12694252 + L1M3 LINE L1 3895 3952 -2194 1174 205 151 69 chr17 72744240 72744307 -12694173 - MLT1D LTR MaLR -2 503 443 5518 90 14 3 chr17 72744307 72744744 -12693736 - L1PA12 LINE L1 0 6168 5737 2296 89 7 0 chr17 72744744 72745035 -12693445 - AluSx SINE Alu -19 293 1 5518 90 14 3 chr17 72745035 72745322 -12693158 - L1PA12 LINE L1 -431 5737 5454 234 0 0 0 chr17 72745322 72745348 -12693132 + (TTA)n Simple_repeat Simple_repeat 2 27 0 5518 90 14 3 chr17 72745348 72746094 -12692386 - L1PA12 LINE L1 -714 5454 4802 1174 205 151 69 chr17 72746094 72746490 -12691990 - MLT1D LTR MaLR -62 443 2 23 0 0 0 chr17 72746846 72746869 -12691611 + AT_rich Low_complexity Low_complexity 1 23 0 234 62 0 0 chr17 72746888 72746920 -12691560 + (TG)n Simple_repeat Simple_repeat 2 33 0 252 215 29 95 chr17 72746957 72747070 -12691410 + L1M3 LINE L1 5294 5384 -784 2249 122 0 0 chr17 72747070 72747373 -12691107 + AluSx SINE Alu 1 303 -9 252 215 29 95 chr17 72747373 72747442 -12691038 + L1M3 LINE L1 5384 5456 -712 281 220 231 44 chr17 72747579 72747761 -12690719 + L1MC5 LINE L1 7259 7474 -487 2187 142 0 0 chr17 72747807 72748118 -12690362 + AluSx SINE Alu 1 311 -1 2362 85 3 13 chr17 72748315 72748631 -12689849 + AluSp SINE Alu 1 313 0 2227 116 10 0 chr17 72748817 72749127 -12689353 - AluSq SINE Alu 0 313 1 697 206 67 36 chr17 72749135 72749358 -12689122 - L1MC5 LINE L1 -51 7910 7681 1437 79 5 5 chr17 72749863 72750053 -12688427 - AluSg/x SINE Alu -12 298 109 1606 77 5 5 chr17 72750053 72750260 -12688220 - AluSx SINE Alu -105 207 1 267 191 0 0 chr17 72750542 72750610 -12687870 + (CTA)n Simple_repeat Simple_repeat 1 68 0 292 356 96 37 chr17 72750760 72751030 -12687450 - L2 LINE L2 -81 3191 2906 221 0 0 33 chr17 72751871 72751901 -12686579 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr17 72752242 72752277 -12686203 + (CA)n Simple_repeat Simple_repeat 1 35 0 1418 208 33 15 chr17 72752285 72752680 -12685800 + MER54B LTR ERVL 484 793 0 393 322 82 6 chr17 72752917 72753100 -12685380 - MIR SINE MIR -13 249 53 205 231 60 99 chr17 72753260 72753442 -12685038 - L2 LINE L2 -87 3226 3052 190 287 176 9 chr17 72753568 72753676 -12684804 - L2 LINE L2 -214 3058 2933 2117 112 0 43 chr17 72753743 72754066 -12684414 + AluSx SINE Alu 1 309 -3 2230 112 0 3 chr17 72754066 72754369 -12684111 + AluSg SINE Alu 1 302 -8 21 0 0 0 chr17 72755510 72755531 -12682949 + AT_rich Low_complexity Low_complexity 1 21 0 226 254 45 45 chr17 72756914 72756981 -12681499 + L2 LINE L2 3180 3246 -26 332 248 28 20 chr17 72757386 72757495 -12680985 - MIR SINE MIR -56 206 99 328 333 83 6 chr17 72757616 72757772 -12680708 + MIR3 SINE MIR 16 183 -25 2411 82 0 0 chr17 72757861 72758164 -12680316 - AluY SINE Alu -6 305 3 2352 105 0 3 chr17 72758751 72759056 -12679424 + AluSx SINE Alu 1 304 -8 206 121 0 0 chr17 72759994 72760027 -12678453 + (T)n Simple_repeat Simple_repeat 1 33 0 213 121 0 0 chr17 72760532 72760565 -12677915 + (T)n Simple_repeat Simple_repeat 1 33 0 6005 232 50 36 chr17 72760713 72760924 -12677556 - L1MD2 LINE L1 -12 6347 6141 216 0 0 0 chr17 72760924 72760948 -12677532 + (TG)n Simple_repeat Simple_repeat 1 24 0 6005 232 50 36 chr17 72760948 72761633 -12676847 - L1MD2 LINE L1 -218 6141 5468 2244 92 0 46 chr17 72761633 72761958 -12676522 - AluSq SINE Alu -3 310 1 6005 232 50 36 chr17 72761958 72763421 -12675059 - L1MD2 LINE L1 -891 5468 3932 1927 152 0 13 chr17 72763421 72763737 -12674743 - AluJb SINE Alu 0 312 1 6005 232 50 36 chr17 72763737 72764563 -12673917 - L1MD2 LINE L1 -2427 3932 3120 24 32 0 0 chr17 72764656 72764687 -12673793 + AT_rich Low_complexity Low_complexity 1 31 0 206 322 46 53 chr17 72765164 72765276 -12673204 - MIR SINE MIR -64 198 88 411 306 16 8 chr17 72765276 72765400 -12673080 + MIR SINE MIR 3 127 -135 1322 122 0 5 chr17 72765400 72765589 -12672891 + AluSg/x SINE Alu 112 299 -11 271 299 13 0 chr17 72765610 72765687 -12672793 + MIR SINE MIR 171 248 -14 249 316 0 13 chr17 72765709 72765785 -12672695 - MIR SINE MIR -174 88 14 2369 97 3 0 chr17 72765920 72766228 -12672252 - AluSg SINE Alu -1 309 1 237 241 35 0 chr17 72766389 72766447 -12672033 + L2 LINE L2 3254 3313 0 333 330 46 9 chr17 72766978 72767087 -12671393 + MIR SINE MIR 31 143 -65 460 177 135 28 chr17 72767141 72767282 -12671198 - MER58C DNA MER1_type -4 211 56 2067 102 25 3 chr17 72767434 72767717 -12670763 + AluSx SINE Alu 11 299 -13 2473 79 0 0 chr17 72768143 72768448 -12670032 - AluSq SINE Alu -3 310 6 2429 81 0 0 chr17 72768752 72769048 -12669432 - AluSx SINE Alu -16 296 1 312 248 248 8 chr17 72769308 72769425 -12669055 + MIR3 SINE MIR 3 147 -61 3187 108 20 0 chr17 72769598 72770052 -12668428 - MER1A DNA MER1_type 0 529 67 498 288 26 13 chr17 72770123 72770276 -12668204 - MIR SINE MIR -17 245 91 351 266 48 77 chr17 72771454 72771502 -12666978 - L1MC5 LINE L1 -262 7699 7651 2179 100 0 4 chr17 72771502 72771816 -12666664 + AluSg SINE Alu 3 315 0 351 266 48 77 chr17 72771816 72771973 -12666507 - L1MC5 LINE L1 -310 7651 7499 22 0 0 0 chr17 72773791 72773813 -12664667 + AT_rich Low_complexity Low_complexity 1 22 0 280 274 0 0 chr17 72775060 72775122 -12663358 + MER5A DNA MER1_type 128 189 0 239 203 16 0 chr17 72775222 72775286 -12663194 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 243 0 0 0 chr17 72775398 72775425 -12663055 + (A)n Simple_repeat Simple_repeat 1 27 0 1442 115 0 0 chr17 72775450 72775641 -12662839 + AluSq SINE Alu 1 191 -122 1650 184 6 19 chr17 72776365 72776681 -12661799 + AluJo SINE Alu 1 312 0 1696 225 0 8 chr17 72777414 72777769 -12660711 - MLT1A1 LTR MaLR 0 365 14 255 319 43 64 chr17 72778737 72778878 -12659602 + MIR3 SINE MIR 23 160 -48 2051 125 37 67 chr17 72779045 72779420 -12659060 - THE1B LTR MaLR 0 364 1 485 288 71 75 chr17 72780455 72780722 -12657758 - L2 LINE L2 -89 3183 2918 2027 108 29 4 chr17 72781440 72781718 -12656762 + AluSq SINE Alu 16 300 -13 2400 106 0 3 chr17 72782168 72782480 -12656000 + AluSx SINE Alu 1 311 -1 510 286 11 17 chr17 72782704 72782879 -12655601 - MER5B DNA MER1_type 0 178 5 2569 58 0 10 chr17 72783089 72783402 -12655078 - AluY SINE Alu -1 310 1 1166 181 10 10 chr17 72783730 72783935 -12654545 + AluJb SINE Alu 107 311 -1 22 0 0 0 chr17 72783938 72783960 -12654520 + AT_rich Low_complexity Low_complexity 1 22 0 2032 124 7 33 chr17 72786523 72786830 -12651650 - AluSx SINE Alu -13 299 1 1187 181 9 5 chr17 72787585 72787801 -12650679 - MER20 DNA MER1_type 0 219 3 24 0 0 0 chr17 72788154 72788178 -12650302 + AT_rich Low_complexity Low_complexity 1 24 0 236 100 25 0 chr17 72788542 72788582 -12649898 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 1954 133 7 10 chr17 72788902 72789202 -12649278 + AluJb SINE Alu 1 299 -13 279 0 0 0 chr17 72789471 72789502 -12648978 + (CA)n Simple_repeat Simple_repeat 2 32 0 1917 144 0 14 chr17 72790387 72790702 -12647778 + AluJb SINE Alu 1 311 0 27 0 0 0 chr17 72791605 72791632 -12646848 + AT_rich Low_complexity Low_complexity 1 27 0 739 164 0 0 chr17 72791632 72791748 -12646732 - FLAM_A SINE Alu -14 128 13 899 230 4 44 chr17 72792402 72792628 -12645852 - MER58A DNA MER1_type -7 217 1 2302 92 0 0 chr17 72794573 72794866 -12643614 + AluY SINE Alu 1 293 -18 21 0 0 0 chr17 72795020 72795041 -12643439 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 72795720 72795741 -12642739 + AT_rich Low_complexity Low_complexity 1 21 0 456 207 62 112 chr17 72797485 72797664 -12640816 - MER5B DNA MER1_type -3 175 6 328 338 6 13 chr17 72798582 72798739 -12639741 + MARNA DNA Mariner 272 427 -159 252 246 31 0 chr17 72798805 72798870 -12639610 + MARNA DNA Mariner 458 524 -62 641 177 8 8 chr17 72799140 72799270 -12639210 - MER119 DNA MER1_type 0 583 454 2376 97 3 0 chr17 72799330 72799630 -12638850 + AluSq SINE Alu 1 301 -12 1278 177 5 14 chr17 72800877 72801097 -12637383 - MER58A DNA MER1_type -4 220 3 24 0 0 0 chr17 72804077 72804101 -12634379 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr17 72804152 72804174 -12634306 + AT_rich Low_complexity Low_complexity 1 22 0 1817 142 74 43 chr17 72807646 72807998 -12630482 - THE1B LTR MaLR -1 363 1 2116 142 0 13 chr17 72808032 72808348 -12630132 + AluSx SINE Alu 1 312 0 2292 105 0 3 chr17 72808379 72808684 -12629796 - AluSg SINE Alu -6 304 1 3919 75 9 13 chr17 72809207 72809750 -12628730 - L1PA10 LINE L1 0 6168 5628 394 232 159 16 chr17 72810333 72810651 -12627829 - MLT1H LTR MaLR 0 555 221 23 0 0 0 chr17 72810918 72810941 -12627539 + AT_rich Low_complexity Low_complexity 1 23 0 2314 100 3 0 chr17 72811299 72811600 -12626880 - AluSx SINE Alu -10 302 1 2287 104 6 3 chr17 72811637 72811964 -12626516 + L1PB2 LINE L1 5822 6149 -2 338 209 50 146 chr17 72812794 72812871 -12625609 - L1MA9 LINE L1 -24 6288 6205 3915 30 2 0 chr17 72812871 72813336 -12625144 - L1PA5 LINE L1 -3 6151 5686 338 209 50 146 chr17 72813336 72813497 -12624983 - L1MA9 LINE L1 -107 6205 6073 194 139 0 70 chr17 72813554 72813597 -12624883 + MER5A DNA MER1_type 32 71 -118 1956 126 33 10 chr17 72813871 72814172 -12624308 - AluSx SINE Alu -4 308 1 1885 127 0 29 chr17 72815316 72815624 -12622856 + AluJb SINE Alu 1 299 -13 476 276 40 35 chr17 72815671 72815845 -12622635 + MIR SINE MIR 88 262 0 351 0 0 0 chr17 72816253 72816292 -12622188 + (T)n Simple_repeat Simple_repeat 1 39 0 2294 106 0 3 chr17 72816369 72816680 -12621800 - AluSx SINE Alu -2 310 1 22 56 0 0 chr17 72816682 72816718 -12621762 + AT_rich Low_complexity Low_complexity 1 36 0 2101 133 36 28 chr17 72816785 72817145 -12621335 + THE1B LTR MaLR 1 363 -1 180 0 0 0 chr17 72817271 72817291 -12621189 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 357 145 0 0 chr17 72817293 72817369 -12621111 + (TC)n Simple_repeat Simple_repeat 1 76 0 2447 43 13 0 chr17 72817369 72817673 -12620807 - AluY SINE Alu -3 308 1 2161 103 27 7 chr17 72818007 72818308 -12620172 + AluSx SINE Alu 1 307 -5 285 313 60 22 chr17 72818364 72818498 -12619982 - MIR SINE MIR -63 199 61 25 0 0 0 chr17 72818937 72818962 -12619518 + AT_rich Low_complexity Low_complexity 1 25 0 8265 192 92 9 chr17 72818976 72821008 -12617472 + L1PA15 LINE L1 3143 5393 -772 1715 193 3 0 chr17 72821008 72821304 -12617176 + AluJb SINE Alu 1 297 -15 8265 192 92 9 chr17 72821304 72821558 -12616922 + L1PA15 LINE L1 5393 5625 -540 7691 17 20 0 chr17 72821568 72822521 -12615959 - L1PA3 LINE L1 -1 6154 5198 3549 119 6 0 chr17 72822521 72823049 -12615431 + L1PA15 LINE L1 5623 6153 -12 278 349 8 0 chr17 72823204 72823330 -12615150 + L2 LINE L2 1799 1925 -1389 378 318 68 0 chr17 72823345 72823477 -12615003 - L2 LINE L2 -963 2351 2211 346 70 28 28 chr17 72823487 72823558 -12614922 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 231 333 0 14 chr17 72823656 72823725 -12614755 + L2 LINE L2 3162 3229 -43 445 272 230 14 chr17 72823765 72823978 -12614502 + MIR SINE MIR 4 262 0 327 325 31 25 chr17 72824700 72825189 -12613291 + L1P LINE L1 4538 5026 -1120 35 24 0 0 chr17 72825355 72825397 -12613083 + AT_rich Low_complexity Low_complexity 1 42 0 1796 296 87 58 chr17 72825405 72827021 -12611459 + L1MC4a LINE L1 5277 6939 -869 1981 232 85 61 chr17 72827121 72828043 -12610437 + L1MC5 LINE L1 6968 7911 -50 2369 55 0 51 chr17 72828127 72828438 -12610042 + AluY SINE Alu 1 295 -16 1454 174 90 6 chr17 72829532 72829843 -12608637 + MER58B DNA MER1_type 5 341 0 2215 130 0 0 chr17 72829989 72830290 -12608190 + AluSx SINE Alu 1 301 -11 365 102 17 0 chr17 72830290 72830349 -12608131 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 204 204 0 0 chr17 72831342 72831386 -12607094 + GA-rich Low_complexity Low_complexity 2 45 0 529 225 174 0 chr17 72832721 72832859 -12605621 + MER5A DNA MER1_type 13 174 -15 5028 84 10 0 chr17 72832862 72833538 -12604942 + L1PA10 LINE L1 5482 6164 -4 22 0 0 0 chr17 72833946 72833968 -12604512 + AT_rich Low_complexity Low_complexity 1 22 0 488 280 26 32 chr17 72834191 72834380 -12604100 - MER5A DNA MER1_type -1 188 1 313 375 6 0 chr17 72834962 72835130 -12603350 + (CA)n Simple_repeat Simple_repeat 1 169 0 3277 249 24 32 chr17 72835503 72835970 -12602510 - L1ME LINE L1 -1728 4352 3883 2020 113 31 3 chr17 72835970 72836263 -12602217 + AluSx SINE Alu 1 301 -11 3277 249 24 32 chr17 72836263 72836579 -12601901 - L1ME LINE L1 -2197 3883 3578 2325 100 3 0 chr17 72836579 72836889 -12601591 - AluY SINE Alu 0 311 1 3277 249 24 32 chr17 72836889 72837159 -12601321 - L1ME LINE L1 -2502 3578 3307 1218 191 34 4 chr17 72837527 72837762 -12600718 - MLT1D LTR MaLR 0 505 264 496 193 11 97 chr17 72837762 72837938 -12600542 + L1MA9 LINE L1 6122 6282 -30 2135 241 69 14 chr17 72837954 72838755 -12599725 - L1ME LINE L1 -2763 3317 2473 * 2288 252 116 45 chr17 72838746 72840050 -12598430 - L1ME LINE L1 -3853 2227 802 1724 154 22 0 chr17 72840050 72840317 -12598163 - AluJb SINE Alu -16 296 24 2288 252 116 45 chr17 72840317 72840767 -12597713 - L1ME LINE L1 -5278 802 385 343 294 54 105 chr17 72840767 72841063 -12597417 - L1ME LINE L1 -5589 481 201 2300 98 0 0 chr17 72841226 72841522 -12596958 + AluSq SINE Alu 1 296 -17 225 0 0 0 chr17 72841973 72841998 -12596482 + (A)n Simple_repeat Simple_repeat 1 25 0 2307 82 17 0 chr17 72842364 72842658 -12595822 - AluSq SINE Alu -14 299 1 420 183 42 42 chr17 72842747 72842787 -12595693 + L1MC3 LINE L1 6925 6964 -821 1750 151 50 107 chr17 72842787 72843245 -12595235 - Tigger2a DNA MER2_type -2 432 1 420 183 42 42 chr17 72843245 72843324 -12595156 + L1MC3 LINE L1 6963 7044 -741 1796 234 39 34 chr17 72843374 72843839 -12594641 - MER21B LTR ERV1 -51 812 346 1007 247 4 38 chr17 72843950 72844217 -12594263 + LTR31 LTR ERV1 113 370 -249 2336 173 42 2 chr17 72844237 72844642 -12593838 + MSTB LTR MaLR 1 421 -5 685 98 131 25 chr17 72844644 72844766 -12593714 - Tigger2 DNA MER2_type -226 2492 2358 966 249 26 9 chr17 72844774 72845003 -12593477 + LTR31 LTR ERV1 387 619 0 * 1611 215 6 64 chr17 72845003 72845173 -12593307 - MER21B LTR ERV1 -496 435 257 2176 129 3 0 chr17 72845173 72845484 -12592996 + AluSx SINE Alu 1 312 0 1611 215 6 64 chr17 72845484 72845672 -12592808 - MER21B LTR ERV1 -674 257 12 2650 172 39 98 chr17 72845722 72846084 -12592396 + L1MC3 LINE L1 7107 7406 -379 1960 138 0 24 chr17 72846084 72846382 -12592098 + AluSx SINE Alu 9 299 -13 2650 172 39 98 chr17 72846382 72846740 -12591740 + L1MC3 LINE L1 7406 7784 -1 22 35 0 0 chr17 72847512 72847541 -12590939 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr17 72847716 72847741 -12590739 + AT_rich Low_complexity Low_complexity 1 25 0 199 287 12 134 chr17 72847934 72848098 -12590382 - MIR SINE MIR -63 145 2 230 196 22 0 chr17 72849863 72849909 -12588571 + CT-rich Low_complexity Low_complexity 2 48 0 448 344 26 36 chr17 72849985 72850177 -12588303 - L3 LINE CR1 -6 1571 1382 866 325 106 47 chr17 72850347 72851026 -12587454 - L2 LINE L2 -342 2972 2254 401 250 106 30 chr17 72851062 72851166 -12587314 - L3 LINE CR1 -187 1390 1273 2552 115 3 8 chr17 72851166 72851532 -12586948 + THE1B LTR MaLR 1 364 0 401 250 106 30 chr17 72851532 72851559 -12586921 - L3 LINE CR1 -304 1273 1249 396 285 49 8 chr17 72851652 72851775 -12586705 - MIR SINE MIR -109 153 26 643 280 303 14 chr17 72851812 72852244 -12586236 - L3 LINE CR1 -377 1200 644 270 163 0 0 chr17 72852336 72852379 -12586101 + MIR SINE MIR 117 159 -103 1291 248 87 9 chr17 72852823 72853158 -12585322 - LTR16C LTR ERVL -3 488 128 2119 118 3 0 chr17 72853336 72853623 -12584857 + AluSg SINE Alu 1 288 -22 3857 170 44 68 chr17 72853625 72853839 -12584641 + L1MB4 LINE L1 5268 5486 -694 220 27 54 0 chr17 72853839 72853876 -12584604 + (CAA)n Simple_repeat Simple_repeat 2 40 0 3857 170 44 68 chr17 72853876 72854591 -12583889 + L1MB4 LINE L1 5486 6180 0 413 301 68 29 chr17 72855302 72855502 -12582978 + MIR3 SINE MIR 2 214 -48 1775 197 0 0 chr17 72855502 72855812 -12582668 + AluJo SINE Alu 1 310 -2 413 301 68 29 chr17 72855812 72855850 -12582630 + MIR3 SINE MIR 214 249 -13 233 311 131 0 chr17 72855908 72856030 -12582450 + MLT1J LTR MaLR 5 142 -369 755 194 7 0 chr17 72856078 72856222 -12582258 + L1MB1 LINE L1 6045 6189 0 1862 114 37 82 chr17 72856233 72856610 -12581870 - THE1C LTR MaLR -2 373 14 445 101 192 50 chr17 72856620 72856719 -12581761 + L1MA10 LINE L1 6211 6323 -11 365 326 52 43 chr17 72856830 72857063 -12581417 + MLT1J LTR MaLR 271 505 -6 300 307 80 0 chr17 72857598 72857735 -12580745 + MIR SINE MIR 114 261 -1 1038 149 0 0 chr17 72857739 72858174 -12580306 + (TA)n Simple_repeat Simple_repeat 1 435 0 2424 94 0 0 chr17 72858176 72858484 -12579996 - AluSc SINE Alu -1 308 1 885 213 32 14 chr17 72858659 72859023 -12579457 + L1MD3 LINE L1 7133 7682 -313 23 33 0 0 chr17 72859220 72859250 -12579230 + AT_rich Low_complexity Low_complexity 1 30 0 2301 88 0 7 chr17 72859259 72859565 -12578915 + AluSc SINE Alu 3 306 -3 24 0 0 0 chr17 72859796 72859820 -12578660 + AT_rich Low_complexity Low_complexity 1 24 0 269 195 76 0 chr17 72859831 72859917 -12578563 + MIR SINE MIR 45 144 -64 1450 77 0 57 chr17 72859957 72860166 -12578314 - MER107 DNA MER1_type 0 197 1 306 293 43 43 chr17 72860180 72860296 -12578184 - MER5B DNA MER1_type -51 127 12 2598 58 0 0 chr17 72861138 72861447 -12577033 - AluY SINE Alu -2 309 1 1369 130 19 0 chr17 72861462 72861670 -12576810 + AluSg/x SINE Alu 99 310 -2 572 181 62 40 chr17 72861680 72861841 -12576639 - L1 LINE L1 -1815 4331 4164 1099 93 0 12 chr17 72861841 72862003 -12576477 - L1PA7 LINE L1 0 6154 5995 572 181 62 40 chr17 72862003 72862018 -12576462 - L1 LINE L1 -1982 4164 4151 1941 178 5 24 chr17 72862918 72863294 -12575186 + MLT2D LTR ERVL 1 369 -45 240 122 0 0 chr17 72863343 72863384 -12575096 + (CA)n Simple_repeat Simple_repeat 2 42 0 212 312 123 41 chr17 72864333 72864503 -12573977 - L2 LINE L2 -411 2903 2720 275 179 56 36 chr17 72864852 72864957 -12573523 + MLT1J2 LTR MaLR 347 523 -19 418 335 24 19 chr17 72865099 72865311 -12573169 + MLT1I LTR MaLR 197 409 0 322 225 31 158 chr17 72865688 72865836 -12572644 - MIR SINE MIR -40 168 37 249 57 0 0 chr17 72866321 72866356 -12572124 + (TC)n Simple_repeat Simple_repeat 2 36 0 1262 223 49 55 chr17 72866923 72867540 -12570940 + MLT1E2 LTR MaLR 8 620 -6 531 340 0 25 chr17 72867710 72867869 -12570611 + MIR SINE MIR 13 167 -95 * 870 336 86 42 chr17 72867863 72868621 -12569859 + L2 LINE L2 1940 2730 -584 738 268 19 80 chr17 72869243 72869706 -12568774 - L1MC4 LINE L1 0 8042 7608 * 2584 163 31 0 chr17 72869704 72870182 -12568298 - L1MA8 LINE L1 -191 6100 5608 7559 31 0 21 chr17 72870182 72871123 -12567357 - L1PA5 LINE L1 0 6154 5219 7481 44 0 6 chr17 72871123 72872110 -12566370 + L1PA5 LINE L1 4266 5246 -900 699 163 35 0 chr17 72872108 72872249 -12566231 - L1MA8 LINE L1 -668 5623 5478 * 1646 271 71 48 chr17 72872234 72872538 -12565942 - L1MC4 LINE L1 -405 7637 7341 3374 79 5 5 chr17 72872538 72872982 -12565498 - MLT2A1 LTR ERVL 0 444 1 1646 271 71 48 chr17 72872982 72873468 -12565012 - L1MC4 LINE L1 -701 7341 6829 24 0 0 0 chr17 72873988 72874012 -12564468 + AT_rich Low_complexity Low_complexity 1 24 0 1851 198 0 0 chr17 72874438 72874746 -12563734 + AluJb SINE Alu 3 310 -2 3872 195 26 47 chr17 72874887 72875306 -12563174 - L1MB7 LINE L1 -1 6183 5757 2463 82 0 0 chr17 72875306 72875611 -12562869 + AluSc SINE Alu 2 306 -3 3872 195 26 47 chr17 72875611 72875786 -12562694 - L1MB7 LINE L1 -427 5757 5580 207 0 0 0 chr17 72875786 72875809 -12562671 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 1974 134 38 3 chr17 72875809 72876095 -12562385 - AluSx SINE Alu -16 296 1 3872 195 26 47 chr17 72876095 72876799 -12561681 - L1MB7 LINE L1 -603 5581 4909 2384 70 0 19 chr17 72876799 72877111 -12561369 - AluY SINE Alu -3 308 3 3872 195 26 47 chr17 72877111 72877154 -12561326 - L1MB7 LINE L1 -1275 4909 4867 1555 188 7 14 chr17 72877303 72877585 -12560895 + AluJo SINE Alu 2 281 -31 183 100 0 0 chr17 72877589 72877619 -12560861 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1398 240 64 54 chr17 72878196 72878729 -12559751 + MLT1F LTR MaLR 5 542 0 337 273 161 21 chr17 72879111 72879254 -12559226 + MIR SINE MIR 66 228 -34 734 221 34 0 chr17 72880351 72880524 -12557956 - AluSg/x SINE Alu 0 305 128 2192 125 0 16 chr17 72880526 72880839 -12557641 - AluY SINE Alu -3 308 1 493 314 126 29 chr17 72880879 72881300 -12557180 + LTR16B LTR ERVL 1 462 -2 592 209 23 0 chr17 72881560 72881689 -12556791 + MLT1D LTR MaLR 27 158 -347 5572 147 29 18 chr17 72881697 72883502 -12554978 + L1MA4A LINE L1 4466 6291 -12 733 230 136 112 chr17 72883520 72883801 -12554679 + MLT1D LTR MaLR 168 460 -45 2011 92 0 8 chr17 72883801 72884062 -12554418 - AluSc SINE Alu 0 309 51 733 230 136 112 chr17 72884062 72884110 -12554370 + MLT1D LTR MaLR 460 505 0 1360 304 42 27 chr17 72884118 72884778 -12553702 + HERV16 LTR ERVL 733 1402 -3594 2153 121 0 3 chr17 72885157 72885454 -12553026 + AluSq SINE Alu 1 296 -17 358 258 117 0 chr17 72885725 72885853 -12552627 + MIR SINE MIR 56 198 -64 42460 35 2 2 chr17 72886060 72892216 -12546264 + L1PA3 LINE L1 1 6152 -3 968 191 9 26 chr17 72892327 72892558 -12545922 - L1MB1 LINE L1 -1 6167 5941 2668 111 32 44 chr17 72892723 72892763 -12545717 - MSTA LTR MaLR 0 428 389 1810 173 40 0 chr17 72892763 72893063 -12545417 + AluSx SINE Alu 1 312 0 2668 111 32 44 chr17 72893063 72893455 -12545025 - MSTA LTR MaLR -39 389 1 2008 107 79 25 chr17 72893711 72894067 -12544413 + THE1C LTR MaLR 1 375 0 772 201 106 15 chr17 72894354 72894553 -12543927 + MER20 DNA MER1_type 1 217 -2 199 465 0 0 chr17 72895280 72895366 -12543114 - L2 LINE L2 -26 3246 3161 519 158 45 64 chr17 72897214 72897357 -12541123 + MER34B LTR ERV1 1 154 -388 1569 161 32 85 chr17 72897357 72897735 -12540745 - MER57A LTR ERV1 0 403 46 280 283 16 89 chr17 72897776 72897967 -12540513 + MER34B LTR ERV1 200 376 -189 26 30 0 0 chr17 72899479 72899512 -12538968 + AT_rich Low_complexity Low_complexity 1 33 0 1181 216 101 41 chr17 72899548 72899927 -12538553 + MLT1C LTR MaLR 6 416 -51 1597 59 0 0 chr17 72899927 72900129 -12538351 - L1PA5 LINE L1 0 6154 5953 1181 216 101 41 chr17 72900129 72900185 -12538295 + MLT1C LTR MaLR 416 467 0 2408 91 0 0 chr17 72900248 72900544 -12537936 + AluSg SINE Alu 1 296 -14 290 424 33 39 chr17 72900695 72900852 -12537628 + L2 LINE L2 2890 3046 -226 309 26 0 0 chr17 72900852 72900890 -12537590 + (CA)n Simple_repeat Simple_repeat 2 39 0 290 424 33 39 chr17 72900890 72901039 -12537441 + L2 LINE L2 3046 3194 -78 502 311 83 25 chr17 72901039 72901316 -12537164 - MLT1H LTR MaLR -239 310 18 483 317 74 5 chr17 72901334 72901536 -12536944 + MIR SINE MIR 47 262 0 2258 113 3 3 chr17 72901724 72902033 -12536447 + AluSg SINE Alu 1 309 -1 1663 189 40 3 chr17 72902183 72902479 -12536001 - AluSx SINE Alu -3 309 3 807 237 17 12 chr17 72902652 72902825 -12535655 + MER45A DNA AcHobo 5 178 0 245 286 0 11 chr17 72902826 72902875 -12535605 + (TATG)n Simple_repeat Simple_repeat 2 51 -40 2345 58 0 14 chr17 72902875 72903168 -12535312 + AluY SINE Alu 1 289 -22 245 286 0 11 chr17 72903168 72903209 -12535271 + (TATG)n Simple_repeat Simple_repeat 51 91 0 387 309 115 24 chr17 72903369 72903534 -12534946 - L2 LINE L2 -233 3080 2901 1952 128 55 30 chr17 72904324 72904690 -12533790 - THE1C LTR MaLR 0 375 1 344 249 28 173 chr17 72906329 72906618 -12531862 + MIR SINE MIR 2 248 -14 400 288 51 8 chr17 72906712 72906830 -12531650 + L2 LINE L2 3191 3313 0 582 227 109 0 chr17 72907296 72907424 -12531056 - FLAM_C SINE Alu 0 143 2 1366 216 107 11 chr17 72907663 72908233 -12530247 - LTR28 LTR ERV1 0 1020 349 418 163 167 11 chr17 72908249 72908377 -12530103 - LTR28 LTR ERV1 -565 220 119 413 215 23 15 chr17 72908388 72908547 -12529933 - LTR28 LTR ERV1 -286 755 1 384 227 17 48 chr17 72908650 72908827 -12529653 + MIR SINE MIR 31 251 -11 244 288 12 12 chr17 72910932 72911012 -12527468 - L2 LINE L2 -7 3306 3227 253 248 47 16 chr17 72911077 72911206 -12527274 + L1MC4a LINE L1 6895 7027 -781 782 113 24 24 chr17 72911239 72911407 -12527073 + GA-rich Low_complexity Low_complexity 4 171 0 820 91 0 0 chr17 72911455 72911554 -12526926 - AluSg SINE Alu -201 109 11 2324 96 3 0 chr17 72911581 72911874 -12526606 + AluSg SINE Alu 1 294 -16 1825 244 39 12 chr17 72911879 72912440 -12526040 + L1MC4 LINE L1 7172 7747 -295 688 244 17 22 chr17 72912455 72912635 -12525845 - MER58A DNA MER1_type -16 208 30 922 204 57 4 chr17 72912645 72912930 -12525550 + L1MC4 LINE L1 7740 8036 -6 654 157 66 25 chr17 72912934 72913055 -12525425 + FLAM_A SINE Alu 1 126 -7 3113 158 86 13 chr17 72913590 72914281 -12524199 + LTR1B LTR ERV1 30 785 0 247 260 161 29 chr17 72914461 72914709 -12523771 - MLT1J2 LTR MaLR -153 297 2 2078 108 7 7 chr17 72915829 72916124 -12522356 + AluSg SINE Alu 1 295 -15 200 200 0 0 chr17 72916167 72916202 -12522278 + (CA)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr17 72916216 72916239 -12522241 + AT_rich Low_complexity Low_complexity 1 23 0 196 385 0 21 chr17 72916366 72916462 -12522018 + MIR SINE MIR 58 151 -111 2279 75 0 3 chr17 72916978 72917286 -12521194 + AluSg SINE Alu 1 307 0 1507 184 7 14 chr17 72917500 72917793 -12520687 - MLT2D LTR ERVL 0 414 124 5351 110 1 20 chr17 72917810 72918648 -12519832 - L1PA16 LINE L1 -13 6153 5332 746 155 8 0 chr17 72918648 72918777 -12519703 - MLT2D LTR ERVL -284 130 1 814 283 40 76 chr17 72918785 72919205 -12519275 + L2 LINE L2 2909 3313 0 32 0 0 0 chr17 72919240 72919272 -12519208 + AT_rich Low_complexity Low_complexity 1 32 0 2127 83 47 0 chr17 72919330 72919607 -12518873 + AluSp SINE Alu 2 291 -22 432 304 130 33 chr17 72921013 72921432 -12517048 + L1ME LINE L1 5101 5600 -521 840 183 52 11 chr17 72921432 72921623 -12516857 + L1MA8 LINE L1 6080 6278 -13 432 304 130 33 chr17 72921623 72921759 -12516721 + L1ME LINE L1 5600 5721 -400 229 229 8 123 chr17 72923073 72923195 -12515285 - MIR SINE MIR -51 211 104 360 0 0 0 chr17 72923229 72923269 -12515211 + (CA)n Simple_repeat Simple_repeat 2 41 0 445 299 204 0 chr17 72924535 72924746 -12513734 - MIR SINE MIR -3 259 6 185 343 0 43 chr17 72925349 72925419 -12513061 + L2 LINE L2 3234 3300 -13 2136 74 0 54 chr17 72927529 72927887 -12510593 - AluY SINE Alu 0 342 1 396 316 39 29 chr17 72929670 72929980 -12508500 + L1ME LINE L1 5510 5822 -299 232 242 44 0 chr17 72930249 72930340 -12508140 + T-rich Low_complexity Low_complexity 3 97 0 668 200 6 0 chr17 72931014 72931174 -12507306 + G-rich Low_complexity Low_complexity 2 162 0 2071 88 73 4 chr17 72931541 72931814 -12506666 - AluSc SINE Alu -12 297 6 2209 120 0 0 chr17 72932790 72933091 -12505389 + AluSx SINE Alu 1 301 -11 392 303 96 27 chr17 72933693 72933881 -12504599 + MIR SINE MIR 14 214 -48 404 327 115 2 chr17 72933945 72934128 -12504352 - MIR SINE MIR -14 248 47 2300 82 3 16 chr17 72934419 72934734 -12503746 + AluSx SINE Alu 1 311 -1 231 247 55 14 chr17 72935826 72935972 -12502508 + (TATAA)n Simple_repeat Simple_repeat 4 155 0 239 187 53 0 chr17 72935896 72935971 -12502509 + (TTATA)n Simple_repeat Simple_repeat 1 79 0 415 149 60 24 chr17 72936015 72936239 -12502241 + (TA)n Simple_repeat Simple_repeat 1 231 0 187 145 0 48 chr17 72936258 72936320 -12502160 + (TATAA)n Simple_repeat Simple_repeat 2 60 0 316 172 0 0 chr17 72938612 72938670 -12499810 - L1PA16 LINE L1 -10 6156 6099 4033 171 22 25 chr17 72938813 72939637 -12498843 + L1MB2 LINE L1 5348 6168 -3 222 171 0 0 chr17 72939761 72939802 -12498678 + CT-rich Low_complexity Low_complexity 5 45 0 1672 243 109 33 chr17 72939865 72940416 -12498064 + MLT1E LTR MaLR 1 593 0 22 70 0 0 chr17 72940884 72940927 -12497553 + AT_rich Low_complexity Low_complexity 1 43 0 361 236 25 70 chr17 72942550 72942707 -12495773 - MER5A DNA MER1_type -21 168 19 202 333 11 0 chr17 72942892 72942982 -12495498 + T-rich Low_complexity Low_complexity 3 93 0 350 313 64 52 chr17 72943539 72943762 -12494718 - MIR SINE MIR -18 244 19 517 281 52 13 chr17 72943887 72944040 -12494440 - MIR3 SINE MIR -10 198 40 744 43 0 0 chr17 72944571 72944663 -12493817 + (TAGA)n Simple_repeat Simple_repeat 2 93 0 519 17 0 0 chr17 72944803 72944863 -12493617 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 1609 187 3 28 chr17 72945161 72945450 -12493030 - AluJo SINE Alu -30 282 1 311 275 0 0 chr17 72945472 72945541 -12492939 + L2 LINE L2 3245 3313 0 250 138 35 0 chr17 72946029 72946087 -12492393 + GA-rich Low_complexity Low_complexity 1 60 0 248 319 97 9 chr17 72946452 72946565 -12491915 + MIR SINE MIR 29 151 -111 23 33 0 0 chr17 72946645 72946675 -12491805 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr17 72946989 72947017 -12491463 + AT_rich Low_complexity Low_complexity 1 28 0 241 222 156 56 chr17 72949999 72950089 -12488391 + MER45A DNA AcHobo 80 178 0 1982 137 53 8 chr17 72950855 72951214 -12487266 + THE1C LTR MaLR 1 375 0 316 295 72 36 chr17 72951406 72951711 -12486769 + L1MC5 LINE L1 7611 7926 -35 284 321 127 0 chr17 72951750 72951884 -12486596 + MIR SINE MIR 59 209 -53 25 31 0 0 chr17 72952390 72952422 -12486058 + AT_rich Low_complexity Low_complexity 1 32 0 1494 120 31 9 chr17 72952465 72952690 -12485790 - MER30 DNA MER1_type 0 230 1 254 270 27 0 chr17 72953016 72953090 -12485390 - MIR SINE MIR -3 259 184 * 423 257 67 0 chr17 72953076 72953181 -12485299 - L2 LINE L2 0 3313 3202 511 308 70 0 chr17 72953203 72953375 -12485105 - MIR SINE MIR -73 189 6 25 0 0 0 chr17 72955127 72955152 -12483328 + AT_rich Low_complexity Low_complexity 1 25 0 216 0 0 0 chr17 72955785 72955809 -12482671 + (T)n Simple_repeat Simple_repeat 1 24 0 494 236 58 44 chr17 72957936 72958161 -12480319 + L1MA7 LINE L1 6064 6291 0 2265 98 14 0 chr17 72958362 72958659 -12479821 + AluSx SINE Alu 1 301 -11 240 122 0 0 chr17 72958659 72958700 -12479780 + (GA)n Simple_repeat Simple_repeat 1 41 0 640 314 28 4 chr17 72959958 72960210 -12478270 + LTR16C LTR ERVL 213 470 -21 415 352 35 38 chr17 72961026 72961421 -12477059 + ERVL LTR ERVL 766 1159 -3837 281 336 20 14 chr17 72961411 72961557 -12476923 + ERVL LTR ERVL 4649 4795 -969 * 634 172 78 0 chr17 72961563 72961755 -12476725 - Charlie1 DNA MER1_type -101 2660 2454 271 351 19 62 chr17 72962305 72962564 -12475916 - L2 LINE L2 -198 3074 2827 800 215 0 19 chr17 72962620 72962778 -12475702 + AluSg/x SINE Alu 136 290 -20 1754 96 64 8 chr17 72963509 72963759 -12474721 + AluSq SINE Alu 34 297 -16 1741 201 127 11 chr17 72963892 72964312 -12474168 + MLT2B1 LTR ERVL 3 483 -37 276 77 0 0 chr17 72964312 72964351 -12474129 + (CA)n Simple_repeat Simple_repeat 2 40 0 1741 201 127 11 chr17 72964351 72964393 -12474087 + MLT2B1 LTR ERVL 483 519 -1 1811 195 6 0 chr17 72964572 72964910 -12473570 + Tigger7 DNA MER2_type 1 340 -393 762 173 0 27 chr17 72964912 72965062 -12473418 + Tigger7 DNA MER2_type 2442 2587 0 233 255 0 0 chr17 72965234 72965285 -12473195 - MIR SINE MIR -108 154 104 2344 97 11 181 chr17 72965329 72965875 -12472605 + MLT2A2 LTR ERVL 1 453 0 2185 121 33 36 chr17 72966556 72966921 -12471559 - THE1B LTR MaLR 0 364 1 235 313 76 78 chr17 72967182 72967478 -12471002 + MLT1L LTR MaLR 17 312 -303 2609 99 3 0 chr17 72967478 72967831 -12470649 + THE1A LTR MaLR 1 354 -1 11921 84 9 5 chr17 72967832 72969405 -12469075 + THE1A-int LTR MaLR 1 1580 0 2522 113 6 0 chr17 72969405 72969758 -12468722 + THE1A LTR MaLR 1 355 0 235 313 76 78 chr17 72969758 72969905 -12468575 + MLT1L LTR MaLR 310 462 -153 233 211 184 28 chr17 72970443 72970552 -12467928 + MLT1L LTR MaLR 458 583 -32 2769 100 30 55 chr17 72970985 72971354 -12467126 + MER83 LTR ERV1 1 358 -90 2572 57 0 16 chr17 72971354 72971670 -12466810 - AluY SINE Alu 0 311 1 2769 100 30 55 chr17 72971670 72971759 -12466721 + MER83 LTR ERV1 358 448 0 266 309 0 8 chr17 72971825 72971948 -12466532 + (TA)n Simple_repeat Simple_repeat 1 122 0 2041 37 0 0 chr17 72971998 72972241 -12466239 - L1PA4 LINE L1 -6 6149 5907 22 35 0 0 chr17 72973115 72973144 -12465336 + AT_rich Low_complexity Low_complexity 1 29 0 29 28 0 0 chr17 72973855 72973891 -12464589 + AT_rich Low_complexity Low_complexity 1 36 0 577 303 54 29 chr17 72973996 72974237 -12464243 - MIR SINE MIR 0 262 16 419 274 39 7 chr17 72974815 72974968 -12463512 + MLT1H LTR MaLR 392 549 0 208 245 0 0 chr17 72974969 72975022 -12463458 - MIR SINE MIR -40 222 170 21 0 0 0 chr17 72976136 72976157 -12462323 + AT_rich Low_complexity Low_complexity 1 21 0 1114 271 104 89 chr17 72976819 72977329 -12461151 - HAL1 LINE L1 -7 2500 1966 189 74 0 0 chr17 72977329 72977356 -12461124 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1114 271 104 89 chr17 72977356 72977823 -12460657 - HAL1 LINE L1 -541 1966 1508 228 341 170 45 chr17 72977890 72978248 -12460232 + L2 LINE L2 2538 2940 -374 494 330 66 0 chr17 72978335 72978532 -12459948 + MIR SINE MIR 53 262 0 13650 214 50 24 chr17 72978724 72981347 -12457133 + L1PA15 LINE L1 1114 3666 -3150 1977 152 14 0 chr17 72981347 72981630 -12456850 + AluSx SINE Alu 13 299 -13 13650 214 50 24 chr17 72981630 72981702 -12456778 + L1PA15 LINE L1 3666 3735 -3081 890 141 0 15 chr17 72981702 72981837 -12456643 + FLAM_C SINE Alu 1 133 0 13650 214 50 24 chr17 72981837 72983893 -12454587 + L1PA15 LINE L1 3735 6030 -786 1740 193 3 0 chr17 72983893 72984189 -12454291 + AluJb SINE Alu 1 297 -15 13650 214 50 24 chr17 72984189 72984443 -12454037 + L1PA15 LINE L1 6030 6276 -540 7700 17 20 0 chr17 72984453 72985406 -12453074 - L1PA3 LINE L1 -1 6154 5198 3535 119 6 0 chr17 72985406 72985934 -12452546 + L1PA15 LINE L1 6274 6804 -12 282 349 8 0 chr17 72986089 72986215 -12452265 + L2 LINE L2 1799 1925 -1389 375 318 68 0 chr17 72986230 72986362 -12452118 - L2 LINE L2 -963 2351 2211 346 70 28 28 chr17 72986372 72986443 -12452037 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 231 333 0 14 chr17 72986541 72986610 -12451870 + L2 LINE L2 3162 3229 -43 422 277 230 14 chr17 72986650 72986863 -12451617 + MIR SINE MIR 4 262 0 296 310 29 20 chr17 72987783 72988067 -12450413 + L1P LINE L1 4733 5019 -1127 35 24 0 0 chr17 72988240 72988282 -12450198 + AT_rich Low_complexity Low_complexity 1 42 0 1380 295 90 59 chr17 72988312 72989906 -12448574 + L1MC4a LINE L1 5296 6939 -869 1749 232 85 61 chr17 72990006 72990928 -12447552 + L1MC5 LINE L1 6968 7911 -50 2861 7 0 0 chr17 72991162 72991472 -12447008 + AluYa5 SINE Alu 1 310 -1 234 0 0 0 chr17 72992220 72992246 -12446234 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 373 286 59 0 chr17 72992347 72992466 -12446014 - MER119 DNA MER1_type 0 583 458 395 307 61 9 chr17 72992482 72992596 -12445884 - MER119 DNA MER1_type -463 120 1 459 264 92 68 chr17 72992596 72992846 -12445634 + MIR SINE MIR 4 259 -3 834 218 0 12 chr17 72993111 72993276 -12445204 - AluJb SINE Alu -10 302 140 232 215 15 31 chr17 72994748 72994813 -12443667 - MLT1H1 LTR MaLR -65 490 427 2108 160 26 0 chr17 72994981 72995362 -12443118 - LTR45B LTR ERV1 -98 391 1 239 217 29 0 chr17 72996383 72996452 -12442028 - L1M1 LINE L1 -733 5567 5497 6165 171 14 158 chr17 72996805 72998857 -12439623 - MER52A LTR ERV1 0 1755 1 1075 347 35 46 chr17 72998864 72999695 -12438785 + L2 LINE L2 151 972 -2342 1246 195 7 28 chr17 72999717 73000004 -12438476 - MLT1B LTR MaLR 0 390 110 726 78 0 19 chr17 73000012 73000115 -12438365 - AluSp/q SINE Alu -7 306 206 527 155 29 10 chr17 73000117 73000220 -12438260 - MLT1B LTR MaLR -285 105 1 2104 319 159 30 chr17 73000220 73000896 -12437584 + L2 LINE L2 986 1573 -1740 2003 147 3 7 chr17 73000896 73001195 -12437285 + AluSg SINE Alu 1 298 -12 2104 319 159 30 chr17 73001195 73002552 -12435928 + L2 LINE L2 1573 3312 -1 285 254 113 78 chr17 73002570 73003047 -12435433 + L1ME4a LINE L1 5628 6121 0 27 29 0 0 chr17 73003240 73003274 -12435206 + AT_rich Low_complexity Low_complexity 1 34 0 180 111 0 0 chr17 73003625 73003652 -12434828 + (T)n Simple_repeat Simple_repeat 1 27 0 180 0 0 0 chr17 73003790 73003810 -12434670 + (A)n Simple_repeat Simple_repeat 1 20 0 1726 180 72 14 chr17 73004064 73004409 -12434071 - MLT1A1 LTR MaLR 0 365 1 538 260 178 6 chr17 73005143 73005312 -12433168 + MER58A DNA MER1_type 1 198 -26 247 287 0 19 chr17 73005767 73005875 -12432605 - L1MC/D LINE L1 -2360 5448 5343 2676 156 2 7 chr17 73006071 73006501 -12431979 - MSTA LTR MaLR 0 428 1 454 198 103 9 chr17 73006561 73006677 -12431803 - MIR SINE MIR -49 213 87 2149 116 17 0 chr17 73006901 73007203 -12431277 - AluSx SINE Alu -5 307 1 2245 91 7 0 chr17 73007468 73007755 -12430725 - AluSp SINE Alu -19 294 6 2135 119 0 13 chr17 73009466 73009778 -12428702 + AluSq SINE Alu 1 308 -5 264 201 0 180 chr17 73009908 73010047 -12428433 + MLT1G1-int LTR MaLR 1074 1187 -184 824 278 98 33 chr17 73010246 73010613 -12427867 + MLT1G1 LTR MaLR 5 395 -200 302 332 59 90 chr17 73010618 73010907 -12427573 + L2 LINE L2 2991 3270 -2 2701 181 52 18 chr17 73011122 73011781 -12426699 - Charlie1 DNA MER1_type -34 2727 2047 335 167 45 0 chr17 73011781 73011847 -12426633 + Charlie1 DNA MER1_type 1983 2051 -710 267 226 0 49 chr17 73011851 73011953 -12426527 + (TAA)n Simple_repeat Simple_repeat 2 98 0 2018 241 41 61 chr17 73011954 73012712 -12425768 - Charlie1a DNA MER1_type -712 743 1 1201 188 18 29 chr17 73013214 73013542 -12424938 + MLT1B LTR MaLR 4 390 0 2422 102 28 19 chr17 73013740 73014101 -12424379 - THE1B LTR MaLR 0 364 1 676 323 130 29 chr17 73014311 73014486 -12423994 - L2 LINE L2 0 3298 3142 2314 96 3 0 chr17 73014486 73014779 -12423701 - AluSp SINE Alu -19 294 1 676 323 130 29 chr17 73014779 73015157 -12423323 - L2 LINE L2 -156 3142 2711 1752 180 14 3 chr17 73015175 73015470 -12423010 - AluSx SINE Alu -14 298 1 2773 144 19 2 chr17 73015482 73015962 -12422518 - L1MA6 LINE L1 -5 6295 5808 774 137 0 8 chr17 73015972 73016096 -12422384 + AluJb SINE Alu 1 123 -189 267 173 0 0 chr17 73016098 73016150 -12422330 + Alu SINE Alu 242 293 -9 3287 166 33 14 chr17 73016187 73017342 -12421138 - L1MA6 LINE L1 -491 5809 4639 234 0 0 0 chr17 73017359 73017385 -12421095 + (CA)n Simple_repeat Simple_repeat 2 27 0 4609 153 45 16 chr17 73017385 73018314 -12420166 + L1 LINE L1 3670 4628 -1518 307 318 100 18 chr17 73018323 73018433 -12420047 - L2 LINE L2 -609 2705 2587 394 180 0 11 chr17 73018486 73018575 -12419905 + L1MA7 LINE L1 6198 6285 -6 251 319 22 22 chr17 73018636 73018727 -12419753 + MER5A DNA MER1_type 97 187 -2 188 247 56 56 chr17 73018728 73018817 -12419663 - L2 LINE L2 -723 2591 2503 2168 234 48 28 chr17 73019307 73019850 -12418630 + MLT2B3 LTR ERVL 1 554 0 405 284 84 26 chr17 73021007 73021197 -12417283 - L2 LINE L2 0 3313 3113 2148 99 0 14 chr17 73021225 73021541 -12416939 - AluSg SINE Alu 0 312 1 1419 170 22 30 chr17 73021549 73021819 -12416661 - AluJo SINE Alu -9 303 36 871 206 22 9 chr17 73021826 73022049 -12416431 + L1MD3 LINE L1 7756 7981 -14 227 266 0 0 chr17 73022056 73022092 -12416388 + A-rich Low_complexity Low_complexity 1 39 -25 2425 90 0 6 chr17 73022092 73022404 -12416076 + AluSg SINE Alu 1 310 0 227 266 0 0 chr17 73022404 73022431 -12416049 + A-rich Low_complexity Low_complexity 38 64 0 415 341 53 10 chr17 73023010 73023218 -12415262 + MIR SINE MIR 20 236 -26 462 298 54 25 chr17 73024531 73024773 -12413707 + MLT1K LTR MaLR 1 249 -339 4639 136 42 7 chr17 73024943 73025757 -12412723 - Tigger1 DNA MER2_type 0 2418 1577 9039 198 31 12 chr17 73025768 73028357 -12410123 - L1PA16 LINE L1 -9 6157 3494 216 0 0 0 chr17 73028357 73028381 -12410099 + (TTG)n Simple_repeat Simple_repeat 2 25 0 9039 198 31 12 chr17 73028381 73028973 -12409507 - L1PA16 LINE L1 -2672 3494 2915 5932 192 14 9 chr17 73028980 73030620 -12407860 + L1PA16 LINE L1 1953 3598 -3251 9347 143 22 1 chr17 73030629 73032185 -12406295 - Tigger1 DNA MER2_type -830 1588 1 22 0 0 0 chr17 73033027 73033049 -12405431 + AT_rich Low_complexity Low_complexity 1 22 0 1773 199 0 0 chr17 73033051 73033343 -12405137 + AluJb SINE Alu 1 292 -20 826 183 118 73 chr17 73033410 73033734 -12404746 + MLT1H1 LTR MaLR 3 258 -297 325 155 35 43 chr17 73033749 73033865 -12404615 + G-rich Low_complexity Low_complexity 5 119 0 576 138 40 29 chr17 73033883 73034057 -12404423 + G-rich Low_complexity Low_complexity 1 176 0 309 231 9 19 chr17 73034074 73034182 -12404298 + G-rich Low_complexity Low_complexity 4 110 0 618 131 5 63 chr17 73034185 73034376 -12404104 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 248 174 22 0 chr17 73034383 73034429 -12404051 + GA-rich Low_complexity Low_complexity 4 50 0 525 264 46 23 chr17 73034586 73034778 -12403702 + MLT1G LTR MaLR 407 590 0 229 396 56 0 chr17 73038899 73039043 -12399437 + MIR3 SINE MIR 54 205 -3 523 190 133 6 chr17 73039191 73039416 -12399064 + MER63 DNA MER1_type 682 975 -86 416 328 20 36 chr17 73041142 73041337 -12397143 + MIR SINE MIR 26 217 -45 229 355 27 0 chr17 73043262 73043372 -12395108 + L3b LINE CR1 1322 1434 -149 391 230 18 9 chr17 73043432 73043545 -12394935 - Zaphod DNA AcHobo -116 3915 3802 2508 238 156 17 chr17 73043552 73044351 -12394129 - Zaphod DNA AcHobo -3045 986 56 423 0 0 0 chr17 73044351 73044398 -12394082 + (TG)n Simple_repeat Simple_repeat 2 48 0 2508 238 156 17 chr17 73044398 73044464 -12394016 - Zaphod DNA AcHobo -3975 56 1 2631 158 20 2 chr17 73046617 73047105 -12391375 + L1MA4 LINE L1 5799 6295 -5 416 347 12 6 chr17 73047163 73047336 -12391144 - MIR SINE MIR -3 259 86 301 280 93 20 chr17 73047426 73047576 -12390904 + L1ME LINE L1 5174 5334 -812 1671 188 59 17 chr17 73047610 73047708 -12390772 - MLT1D LTR MaLR -20 485 393 2270 141 11 8 chr17 73047708 73048069 -12390411 + THE1B LTR MaLR 1 362 -2 1671 188 59 17 chr17 73048069 73048379 -12390101 - MLT1D LTR MaLR -112 393 60 279 0 0 0 chr17 73048380 73048411 -12390069 + (TTA)n Simple_repeat Simple_repeat 3 33 0 3857 60 2 0 chr17 73048411 73048893 -12389587 - L1PA7 LINE L1 -18 6136 5654 4276 85 9 0 chr17 73048893 73049538 -12388942 + L1P LINE L1 4753 5403 -743 274 175 0 53 chr17 73049546 73049603 -12388877 - MLT1D LTR MaLR -555 71 18 477 271 36 12 chr17 73049693 73049859 -12388621 + L1ME LINE L1 5496 5665 -456 21 0 0 0 chr17 73050049 73050070 -12388410 + AT_rich Low_complexity Low_complexity 1 21 0 415 335 46 0 chr17 73050333 73050506 -12387974 + MIR SINE MIR 11 191 -71 2326 118 8 8 chr17 73050743 73051107 -12387373 + THE1C LTR MaLR 1 364 -11 1572 121 4 92 chr17 73051504 73051861 -12386619 - L1MA4A LINE L1 -322 5978 5652 204 401 26 35 chr17 73051870 73052097 -12386383 + L2 LINE L2 2654 2878 -436 208 311 33 0 chr17 73052199 73052260 -12386220 + L2 LINE L2 2987 3049 -223 610 226 31 0 chr17 73052326 73052485 -12385995 + MER3 DNA MER1_type 4 167 -42 289 357 41 0 chr17 73053004 73053102 -12385378 + MIR3 SINE MIR 88 189 -19 331 273 0 9 chr17 73055021 73055131 -12383349 + L2 LINE L2 1848 1956 -1358 338 0 24 0 chr17 73055194 73055236 -12383244 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 2262 94 24 40 chr17 73055239 73055612 -12382868 - L1MA2 LINE L1 -10 6294 5928 1426 86 19 0 chr17 73055612 73055822 -12382658 + L1MA2 LINE L1 5696 5909 -396 9969 174 75 7 chr17 73056212 73057310 -12381170 + L1PBa LINE L1 609 1631 -5231 10438 19 1 1 chr17 73057310 73059316 -12379164 + L1PA3 LINE L1 4164 6169 0 9969 174 75 7 chr17 73059316 73062514 -12375966 + L1PBa LINE L1 1631 5198 -1664 249 286 14 0 chr17 73062617 73062687 -12375793 + MIR SINE MIR 178 248 -14 249 316 0 13 chr17 73062709 73062785 -12375695 - MIR SINE MIR -174 88 14 2289 100 3 7 chr17 73062920 73063230 -12375250 - AluSg SINE Alu -1 309 1 237 241 35 0 chr17 73063392 73063450 -12375030 + L2 LINE L2 3254 3313 0 333 330 46 9 chr17 73063983 73064092 -12374388 + MIR SINE MIR 31 143 -65 460 177 135 28 chr17 73064146 73064287 -12374193 - MER58C DNA MER1_type -4 211 56 2032 102 25 7 chr17 73064439 73064723 -12373757 + AluSx SINE Alu 11 299 -13 2451 78 0 3 chr17 73065150 73065456 -12373024 - AluSq SINE Alu -3 310 6 2390 84 0 3 chr17 73065760 73066057 -12372423 - AluSx SINE Alu -16 296 1 319 248 248 8 chr17 73066319 73066436 -12372044 + MIR3 SINE MIR 3 147 -61 3379 108 20 2 chr17 73066609 73067064 -12371416 - MER1A DNA MER1_type 0 529 67 486 288 26 13 chr17 73067135 73067288 -12371192 - MIR SINE MIR -17 245 91 267 266 48 77 chr17 73068474 73068522 -12369958 - L1MC5 LINE L1 -262 7699 7651 2052 99 0 18 chr17 73068522 73068841 -12369639 + AluSg SINE Alu 3 316 0 267 266 48 77 chr17 73068841 73068998 -12369482 - L1MC5 LINE L1 -310 7651 7499 22 0 0 0 chr17 73070817 73070839 -12367641 + AT_rich Low_complexity Low_complexity 1 22 0 275 274 0 0 chr17 73072091 73072153 -12366327 + MER5A DNA MER1_type 128 189 0 239 203 16 0 chr17 73072253 73072317 -12366163 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 243 0 0 0 chr17 73072429 73072456 -12366024 + (A)n Simple_repeat Simple_repeat 1 27 0 1402 115 0 5 chr17 73072483 73072674 -12365806 + AluSq SINE Alu 2 191 -122 1555 191 3 28 chr17 73073398 73073717 -12364763 + AluJo SINE Alu 1 311 -1 1813 225 0 11 chr17 73074450 73074806 -12363674 - MLT1A1 LTR MaLR 0 365 14 237 347 21 62 chr17 73075775 73075919 -12362561 + MIR3 SINE MIR 23 160 -48 2185 125 37 72 chr17 73076087 73076464 -12362016 - THE1B LTR MaLR 0 364 1 472 324 44 66 chr17 73077500 73077772 -12360708 - L2 LINE L2 -89 3183 2918 2023 102 29 4 chr17 73078496 73078770 -12359710 + AluSq SINE Alu 20 300 -13 1926 117 0 48 chr17 73079220 73079536 -12358944 + AluSx SINE Alu 1 301 -11 611 155 19 0 chr17 73080372 73080475 -12358005 + L1MA4 LINE L1 6150 6254 -46 655 284 0 0 chr17 73080478 73080619 -12357861 + FLAM_A SINE Alu 1 141 -1 305 127 0 0 chr17 73080619 73080674 -12357806 + L1MA4A LINE L1 6242 6296 -7 354 319 42 8 chr17 73081403 73081522 -12356958 + MIR SINE MIR 23 145 -117 24 0 0 0 chr17 73082707 73082731 -12355749 + AT_rich Low_complexity Low_complexity 1 24 0 2051 127 0 31 chr17 73134227 73134549 -12303931 + AluSx SINE Alu 1 312 0 357 180 8 82 chr17 73134584 73134621 -12303859 - L1ME4a LINE L1 -49 6072 6034 2292 81 3 0 chr17 73134621 73134936 -12303544 + AluY SINE Alu 1 316 0 357 180 8 82 chr17 73134936 73135019 -12303461 - L1ME4a LINE L1 -87 6034 5960 588 332 11 16 chr17 73135642 73135829 -12302651 - MIR SINE MIR -36 226 41 2833 96 6 3 chr17 73135969 73136332 -12302148 + THE1B LTR MaLR 1 364 0 339 161 0 115 chr17 73136458 73136545 -12301935 - MLT1L LTR MaLR -537 78 2 285 151 0 0 chr17 73137722 73137775 -12300705 + (CA)n Simple_repeat Simple_repeat 1 53 0 418 105 21 32 chr17 73138509 73138604 -12299876 + (TTTC)n Simple_repeat Simple_repeat 1 94 0 589 286 27 22 chr17 73140409 73140594 -12297886 + MIR SINE MIR 61 246 -16 265 329 93 25 chr17 73141075 73141236 -12297244 - MIR3 SINE MIR -34 174 3 815 182 35 86 chr17 73141286 73141404 -12297076 - MER5A DNA MER1_type -1 188 82 2527 63 0 3 chr17 73141404 73141707 -12296773 - AluY SINE Alu -8 303 2 815 182 35 86 chr17 73141707 73141786 -12296694 - MER5A DNA MER1_type -107 82 1 2246 98 9 28 chr17 73141892 73142210 -12296270 - AluSx SINE Alu 0 312 1 884 260 138 34 chr17 73142346 73142968 -12295512 - L2 LINE L2 -45 3268 2572 517 190 108 57 chr17 73142968 73143126 -12295354 - LTR45 LTR ERV1 0 525 324 599 271 6 6 chr17 73143504 73143670 -12294810 - L2 LINE L2 -755 2559 2394 270 309 69 22 chr17 73143706 73143852 -12294628 - MIR3 SINE MIR -63 145 10 431 284 184 11 chr17 73144262 73144452 -12294028 + MIR SINE MIR 40 262 0 709 262 38 22 chr17 73144458 73144641 -12293839 - MER58A DNA MER1_type 0 224 39 1640 196 51 17 chr17 73144686 73144881 -12293599 + MLT1A1 LTR MaLR 1 215 -150 2063 141 63 30 chr17 73144881 73145244 -12293236 - THE1C LTR MaLR 0 375 1 1640 196 51 17 chr17 73145244 73145401 -12293079 + MLT1A1 LTR MaLR 215 365 0 2069 119 7 7 chr17 73146264 73146584 -12291896 + AluSp SINE Alu 1 313 0 441 262 8 33 chr17 73146904 73147026 -12291454 + MER45 DNA AcHobo 1 119 -59 2145 130 10 0 chr17 73147047 73147354 -12291126 - AluSx SINE Alu -2 310 1 592 237 70 44 chr17 73147377 73147605 -12290875 - MER106A DNA MER1_type 0 236 3 188 33 0 33 chr17 73147666 73147696 -12290784 + (TAA)n Simple_repeat Simple_repeat 1 29 0 785 228 85 11 chr17 73147708 73147897 -12290583 - MIR SINE MIR -32 230 28 325 260 130 0 chr17 73148275 73148375 -12290105 + MIR3 SINE MIR 75 187 -21 231 290 33 104 chr17 73148545 73148672 -12289808 - Charlie8 DNA MER1_type -2167 250 138 2298 113 0 3 chr17 73148672 73148983 -12289497 + AluSg SINE Alu 1 310 0 231 290 33 104 chr17 73148983 73149037 -12289443 - Charlie8 DNA MER1_type -2279 138 82 1330 231 118 76 chr17 73149037 73149463 -12289017 + MLT1E1 LTR MaLR 1 463 -191 2312 98 0 7 chr17 73149463 73149770 -12288710 + AluSc SINE Alu 1 305 -4 1330 231 118 76 chr17 73149770 73149971 -12288509 + MLT1E1 LTR MaLR 463 654 0 2169 132 0 0 chr17 73150403 73150706 -12287774 - AluSx SINE Alu -5 307 5 1106 293 93 17 chr17 73151096 73151736 -12286744 + L2 LINE L2 2628 3312 -1 2552 59 0 7 chr17 73153995 73154300 -12284180 + AluSq SINE Alu 1 303 -10 416 199 192 48 chr17 73155087 73155233 -12283247 - MER5A DNA MER1_type -6 183 17 1149 259 75 56 chr17 73155286 73155818 -12282662 + MLT1F LTR MaLR 1 542 0 32 67 0 0 chr17 73157353 73157413 -12281067 + AT_rich Low_complexity Low_complexity 1 60 0 2283 100 0 7 chr17 73157938 73158238 -12280242 - AluSg SINE Alu -12 298 1 1651 174 6 41 chr17 73158956 73159273 -12279207 - AluSx SINE Alu -6 306 1 317 317 0 0 chr17 73159836 73159940 -12278540 + (TG)n Simple_repeat Simple_repeat 1 104 0 349 260 216 28 chr17 73160424 73160605 -12277875 + MIR SINE MIR 48 262 0 317 239 152 0 chr17 73160756 73160848 -12277632 - L2 LINE L2 -7 3265 3160 2519 70 0 0 chr17 73162768 73163070 -12275410 + AluY SINE Alu 1 302 -9 2057 132 4 0 chr17 73163862 73164197 -12274283 - AluSx SINE Alu 0 336 1 26 0 0 0 chr17 73164279 73164305 -12274175 + AT_rich Low_complexity Low_complexity 1 26 0 423 367 98 22 chr17 73166156 73166477 -12272003 + L2 LINE L2 2317 2689 -625 455 318 0 15 chr17 73166477 73166609 -12271871 - MER94 DNA DNA 0 134 5 423 367 98 22 chr17 73166609 73166778 -12271702 + L2 LINE L2 2689 2844 -470 9324 219 57 18 chr17 73168262 73169447 -12269033 - L1MB7 LINE L1 -20 6662 5525 2101 130 30 25 chr17 73169447 73169809 -12268671 + THE1B LTR MaLR 1 364 0 9324 219 57 18 chr17 73169809 73172307 -12266173 - L1MB7 LINE L1 -1157 5525 2820 2532 254 42 23 chr17 73172343 73173082 -12265398 - L1MB7 LINE L1 -5789 753 1 4119 72 13 6 chr17 73174086 73174624 -12263856 + MER41A LTR ERV1 1 542 -12 276 368 72 0 chr17 73174658 73174783 -12263697 + L2 LINE L2 3176 3309 -4 236 309 29 0 chr17 73174795 73174863 -12263617 - L2 LINE L2 -8 3264 3195 276 100 0 0 chr17 73176333 73176373 -12262107 + (A)n Simple_repeat Simple_repeat 1 40 0 2689 70 22 0 chr17 73177347 73177705 -12260775 - L1PA8 LINE L1 -2 6170 5805 2290 91 0 0 chr17 73178043 73178339 -12260141 - AluSg SINE Alu -14 296 1 2553 161 22 0 chr17 73178370 73178787 -12259693 + MSTB LTR MaLR 1 426 0 2001 148 3 3 chr17 73178869 73179180 -12259300 - AluJo SINE Alu -1 311 1 296 267 0 44 chr17 73179432 73179522 -12258958 + L2 LINE L2 3180 3265 -48 1955 135 9 10 chr17 73180208 73180553 -12257927 - MER4A LTR ERV1 0 664 263 485 98 195 0 chr17 73180555 73180637 -12257843 - MER4A LTR ERV1 -566 98 1 276 351 135 14 chr17 73180801 73181320 -12257160 + L2 LINE L2 1214 1795 -1519 2251 104 3 0 chr17 73181325 73181622 -12256858 + AluSq SINE Alu 1 298 -15 185 397 0 0 chr17 73181956 73182024 -12256456 - L2 LINE L2 -78 3194 3127 2048 128 3 19 chr17 73182756 73183068 -12255412 - AluSx SINE Alu -5 307 1 22 0 0 0 chr17 73183397 73183419 -12255061 + AT_rich Low_complexity Low_complexity 1 22 0 340 193 42 8 chr17 73183455 73183574 -12254906 + (TA)n Simple_repeat Simple_repeat 2 124 0 2035 170 33 40 chr17 73183583 73184089 -12254391 + MLT2A2 LTR ERVL 3 499 -55 4493 104 52 60 chr17 73184089 73184478 -12254002 - MER4E LTR ERV1 0 779 398 2391 67 0 7 chr17 73184478 73184776 -12253704 - AluY SINE Alu -13 298 3 4493 104 52 60 chr17 73184776 73185168 -12253312 - MER4E LTR ERV1 -381 398 4 2035 170 33 40 chr17 73185168 73185224 -12253256 + MLT2A2 LTR ERVL 499 554 0 210 246 0 0 chr17 73185236 73185297 -12253183 + (CATA)n Simple_repeat Simple_repeat 2 62 0 557 261 0 0 chr17 73185299 73185414 -12253066 - MIR SINE MIR -116 146 32 1111 291 91 19 chr17 73185647 73186063 -12252417 + MER69 DNA AcHobo 5 450 -776 297 207 69 17 chr17 73186107 73186223 -12252257 + MER69 DNA AcHobo 2010 2131 -395 1761 170 0 3 chr17 73187134 73187449 -12251031 + AluJb SINE Alu 1 314 0 387 287 72 56 chr17 73187475 73188117 -12250363 + L1ME LINE L1 544 1246 -5015 273 135 0 0 chr17 73188128 73188180 -12250300 + (TC)n Simple_repeat Simple_repeat 2 53 0 273 75 0 0 chr17 73188181 73188221 -12250259 + (CA)n Simple_repeat Simple_repeat 2 41 0 919 269 71 80 chr17 73188260 73189177 -12249303 + L1M4 LINE L1 3258 4166 -1980 572 280 33 9 chr17 73189180 73189394 -12249086 + L1M4 LINE L1 4733 4951 -1195 185 94 31 0 chr17 73189766 73189798 -12248682 + A-rich Low_complexity Low_complexity 3 35 0 839 242 47 9 chr17 73190073 73190288 -12248192 + MIR SINE MIR 40 262 0 582 294 88 15 chr17 73190487 73190691 -12247789 + MIR SINE MIR 2 220 -42 186 43 0 0 chr17 73190718 73190741 -12247739 + (TTA)n Simple_repeat Simple_repeat 1 23 0 2344 95 0 19 chr17 73190859 73191176 -12247304 - AluY SINE Alu 0 311 1 194 119 48 0 chr17 73191547 73191589 -12246891 + A-rich Low_complexity Low_complexity 2 45 0 1184 258 58 46 chr17 73192708 73193189 -12245291 + Charlie7 DNA MER1_type 1 487 -2125 518 255 47 57 chr17 73193189 73193381 -12245099 + MIR SINE MIR 3 192 -70 364 204 162 7 chr17 73193442 73193584 -12244896 + Charlie7 DNA MER1_type 528 691 -1921 192 77 0 0 chr17 73193592 73193618 -12244862 + (TATG)n Simple_repeat Simple_repeat 3 28 0 1319 193 4 4 chr17 73193632 73193875 -12244605 - Tigger3(Golem) DNA MER2_type 0 3038 2796 399 77 0 77 chr17 73193940 73193990 -12244490 - Tigger3(Golem) DNA MER2_type -236 2793 2749 2360 93 0 3 chr17 73193990 73194301 -12244179 + AluSg SINE Alu 1 310 0 399 77 0 77 chr17 73194301 73194328 -12244152 - Tigger3(Golem) DNA MER2_type -280 2749 2722 * 406 275 0 0 chr17 73194327 73194407 -12244073 - Tigger3(Golem) DNA MER2_type -2948 81 2 279 0 0 0 chr17 73194421 73194452 -12244028 + (CA)n Simple_repeat Simple_repeat 2 32 0 1027 291 179 17 chr17 73194466 73195293 -12243187 + Charlie7 DNA MER1_type 725 1685 -927 298 291 34 43 chr17 73195414 73195531 -12242949 - L3b LINE CR1 -139 1444 1329 4195 161 22 45 chr17 73196041 73196884 -12241596 + L1MB3 LINE L1 5357 6180 -3 454 223 58 10 chr17 73197237 73197340 -12241140 - MIR SINE MIR -135 127 20 180 0 0 0 chr17 73197639 73197659 -12240821 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 1021 211 30 4 chr17 73198596 73198833 -12239647 + L1MB5 LINE L1 5909 6151 -23 3477 100 0 2 chr17 73198863 73199351 -12239129 - L1PB1 LINE L1 -3 6148 5662 508 208 23 31 chr17 73199579 73199709 -12238771 + MIR SINE MIR 79 207 -55 39 22 0 0 chr17 73199733 73199779 -12238701 + AT_rich Low_complexity Low_complexity 1 46 0 422 269 23 31 chr17 73199867 73199997 -12238483 + MIR SINE MIR 122 250 -12 317 148 66 0 chr17 73200173 73200234 -12238246 - L1MA6 LINE L1 0 6300 6236 727 278 135 41 chr17 73200402 73200870 -12237610 - MLT1H LTR MaLR -16 533 22 278 71 0 0 chr17 73201440 73201482 -12236998 - MADE1 DNA Mariner 0 80 39 2311 96 0 3 chr17 73203108 73203409 -12235071 - AluSg SINE Alu -10 300 1 421 224 28 56 chr17 73203462 73203522 -12234958 + L2 LINE L2 3205 3262 -51 1549 186 85 63 chr17 73203522 73203969 -12234511 + MSTB2 LTR MaLR 1 457 0 421 224 28 56 chr17 73203969 73204015 -12234465 + L2 LINE L2 3262 3308 -5 262 335 126 35 chr17 73204184 73204438 -12234042 + L2 LINE L2 752 1028 -2286 217 404 14 27 chr17 73204439 73204585 -12233895 + L2 LINE L2 1134 1277 -2037 471 303 142 0 chr17 73204587 73204749 -12233731 + MER5A DNA MER1_type 4 188 -1 803 338 98 15 chr17 73204768 73205238 -12233242 + L2 LINE L2 1613 2121 -1193 286 244 51 39 chr17 73205229 73205307 -12233173 + L2 LINE L2 3194 3272 0 * 232 373 29 0 chr17 73205700 73205802 -12232678 - MIR3 SINE MIR -7 201 97 194 333 0 17 chr17 73206385 73206445 -12232035 + MER5A DNA MER1_type 9 67 -122 * 259 294 35 24 chr17 73206430 73206515 -12231965 - MER5B DNA MER1_type -92 86 1 2129 73 0 11 chr17 73206712 73206987 -12231493 - AluY SINE Alu -1 310 39 21 0 0 0 chr17 73206998 73207019 -12231461 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr17 73207913 73207942 -12230538 + AT_rich Low_complexity Low_complexity 1 29 0 3627 139 39 6 chr17 73208076 73208715 -12229765 - L1MA8 LINE L1 -4 6287 5628 2980 93 11 78 chr17 73208715 73209244 -12229236 - L1MA8 LINE L1 -1170 4976 4483 2218 127 0 0 chr17 73209394 73209693 -12228787 + AluSx SINE Alu 1 299 -13 815 361 64 32 chr17 73209705 73210333 -12228147 - L3 LINE CR1 -22 1555 908 21 36 0 0 chr17 73210333 73210361 -12228119 + AT_rich Low_complexity Low_complexity 1 28 0 263 87 43 0 chr17 73210702 73210748 -12227732 + GA-rich Low_complexity Low_complexity 1 48 0 834 275 29 21 chr17 73211699 73211939 -12226541 + MIR SINE MIR 6 247 -15 623 290 43 0 chr17 73214603 73214810 -12223670 + MIR SINE MIR 7 222 -40 1767 144 25 7 chr17 73215030 73215307 -12223173 + AluJb SINE Alu 1 282 -30 279 0 0 0 chr17 73215320 73215351 -12223129 + (CA)n Simple_repeat Simple_repeat 1 31 0 270 0 0 0 chr17 73215350 73215380 -12223100 + (TC)n Simple_repeat Simple_repeat 2 31 0 * 258 32 0 0 chr17 73215379 73215410 -12223070 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 547 309 16 11 chr17 73215541 73215732 -12222748 + L1MEc LINE L1 37 228 -6168 740 141 7 0 chr17 73215819 73215954 -12222526 + GA-rich Low_complexity Low_complexity 1 136 0 322 328 62 39 chr17 73216029 73216288 -12222192 + L1MEc LINE L1 385 649 -5747 2581 233 68 40 chr17 73216339 73217379 -12221101 + L1ME2 LINE L1 5046 6119 -45 615 311 35 19 chr17 73217576 73217833 -12220647 + MIR SINE MIR 2 262 0 1484 323 48 32 chr17 73218960 73219115 -12219365 - HERV16 LTR ERVL -2004 2992 2841 2398 116 51 19 chr17 73219115 73219546 -12218934 + MER65A LTR ERV1 1 445 0 1484 323 48 32 chr17 73219546 73220115 -12218365 - HERV16 LTR ERVL -2155 2841 2256 1113 229 60 29 chr17 73220155 73220630 -12217850 - L1MD3 LINE L1 -239 6120 5646 588 258 124 17 chr17 73220630 73220863 -12217617 - MLT1E LTR MaLR 0 593 336 871 304 65 52 chr17 73220892 73221030 -12217450 - HERV16 LTR ERVL -3786 1210 1075 1943 138 3 36 chr17 73221030 73221335 -12217145 - AluSx SINE Alu -4 308 14 871 304 65 52 chr17 73221335 73222166 -12216314 - HERV16 LTR ERVL -3921 1075 172 721 306 28 25 chr17 73222285 73222608 -12215872 - LTR16A LTR ERVL -107 343 20 488 347 139 25 chr17 73222741 73223214 -12215266 - L2 LINE L2 -337 2977 2451 2201 109 0 0 chr17 73223447 73223759 -12214721 + AluSq SINE Alu 1 312 0 8296 183 21 69 chr17 73224139 73225983 -12212497 - MER52A LTR ERV1 0 1755 1 369 286 112 46 chr17 73226278 73226474 -12212006 + MIR SINE MIR 54 262 0 3581 31 5 0 chr17 73228928 73229349 -12209131 - L1PA3 LINE L1 -8 6147 5725 1917 151 7 3 chr17 73229789 73230087 -12208393 + AluJo SINE Alu 1 299 -13 219 114 0 0 chr17 73230535 73230570 -12207910 + (TG)n Simple_repeat Simple_repeat 2 36 0 3510 171 70 40 chr17 73231040 73231599 -12206881 + L1MB1 LINE L1 5171 5775 -393 2409 74 0 16 chr17 73231599 73231910 -12206570 - AluY SINE Alu -5 306 1 3510 171 70 40 chr17 73231910 73232316 -12206164 + L1MB1 LINE L1 5775 6167 -1 217 245 19 0 chr17 73233381 73233434 -12205046 + CT-rich Low_complexity Low_complexity 1 54 0 269 310 43 35 chr17 73233604 73233645 -12204835 - L2 LINE L2 -3 3310 3271 853 225 82 40 chr17 73233645 73233974 -12204506 + MER2 DNA MER2_type 2 344 0 269 310 43 35 chr17 73233974 73234048 -12204432 - L2 LINE L2 -42 3271 3194 3284 140 4 10 chr17 73234166 73234681 -12203799 - MER41E LTR ERV1 0 512 1 282 404 29 18 chr17 73235107 73235278 -12203202 + L2 LINE L2 2919 3091 -181 45 34 0 0 chr17 73235883 73235942 -12202538 + AT_rich Low_complexity Low_complexity 1 59 0 1639 221 60 31 chr17 73235971 73236451 -12202029 - MLT2B1 LTR ERVL -26 494 1 372 312 22 22 chr17 73236550 73236688 -12201792 + MER5B DNA MER1_type 1 138 -40 180 0 0 0 chr17 73237211 73237231 -12201249 + (A)n Simple_repeat Simple_repeat 1 20 0 1467 239 13 24 chr17 73237806 73238178 -12200302 - MLT1A2 LTR MaLR -5 369 2 2852 7 0 0 chr17 73238436 73238745 -12199735 + AluYa5 SINE Alu 1 309 -2 234 0 0 0 chr17 73239493 73239519 -12198961 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 373 286 59 0 chr17 73239620 73239739 -12198741 - MER119 DNA MER1_type 0 583 458 395 307 61 9 chr17 73239755 73239869 -12198611 - MER119 DNA MER1_type -463 120 1 377 279 60 71 chr17 73239869 73240052 -12198428 + MIR SINE MIR 4 184 -78 297 0 0 0 chr17 73290459 73290492 -12147988 + (T)n Simple_repeat Simple_repeat 1 33 0 41028 30 21 1 chr17 73290492 73296503 -12141977 - L1HS LINE L1 0 6155 22 2516 64 0 0 chr17 73297091 73297388 -12141092 - AluY SINE Alu -14 297 1 2910 221 70 15 chr17 73297390 73298302 -12140178 + Charlie1 DNA MER1_type 1634 2595 -166 2249 113 0 0 chr17 73299003 73299295 -12139185 - AluSx SINE Alu -20 292 1 310 312 32 49 chr17 73299342 73299589 -12138891 + HERV16 LTR ERVL 937 1179 -3817 1136 169 46 0 chr17 73299627 73299846 -12138634 + L1MA9 LINE L1 5844 6072 -240 308 299 28 0 chr17 73301548 73301655 -12136825 + L1MEc LINE L1 1583 1692 -4704 304 306 183 12 chr17 73301782 73302034 -12136446 + L1MEc LINE L1 1876 2170 -4226 631 272 105 17 chr17 73302096 73302489 -12135991 + L1ME3A LINE L1 5725 6162 -2 282 323 21 0 chr17 73302830 73302926 -12135554 - MIR SINE MIR -10 252 155 2000 96 53 40 chr17 73303148 73303450 -12135030 + AluSc SINE Alu 1 306 -3 21 57 0 0 chr17 73303979 73304014 -12134466 + AT_rich Low_complexity Low_complexity 1 35 0 500 351 50 16 chr17 73304617 73304859 -12133621 - MIR SINE MIR 0 262 13 186 326 145 25 chr17 73304966 73305208 -12133272 - L2 LINE L2 -2087 1227 957 3486 183 29 40 chr17 73305212 73305983 -12132497 - LTR1 LTR ERV1 0 785 24 634 388 50 9 chr17 73306009 73306347 -12132133 - L2 LINE L2 -2605 709 358 2012 118 46 0 chr17 73306348 73306628 -12131852 - AluSc SINE Alu -16 293 1 5970 126 15 18 chr17 73306638 73308024 -12130456 - L1PA14 LINE L1 0 6161 4775 886 223 16 0 chr17 73308036 73308220 -12130260 + MER5A DNA MER1_type 2 188 -1 220 389 22 7 chr17 73308220 73308357 -12130123 - L2 LINE L2 -2956 358 220 1421 89 0 30 chr17 73308850 73309053 -12129427 - MER107 DNA MER1_type 0 197 1 22 0 0 0 chr17 73309076 73309098 -12129382 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr17 73309881 73309921 -12128559 + (CA)n Simple_repeat Simple_repeat 2 41 0 1472 210 54 46 chr17 73310007 73310398 -12128082 + MSTD LTR MaLR 1 394 -2 443 253 114 13 chr17 73310821 73310979 -12127501 - MIR SINE MIR -10 252 79 629 215 110 30 chr17 73311060 73311260 -12127220 + MIR SINE MIR 33 248 -14 300 191 0 117 chr17 73311551 73311645 -12126835 - MER20 DNA MER1_type -5 214 132 413 213 0 106 chr17 73311808 73311949 -12126531 - MER20 DNA MER1_type -93 126 1 260 298 0 48 chr17 73312048 73312132 -12126348 + L2 LINE L2 3186 3265 -7 482 350 24 20 chr17 73314201 73314440 -12124040 + MIR SINE MIR 26 262 0 2140 115 52 27 chr17 73314647 73315013 -12123467 + THE1C LTR MaLR 1 375 0 390 162 9 19 chr17 73315647 73315752 -12122728 + CT-rich Low_complexity Low_complexity 3 106 0 234 354 10 20 chr17 73315832 73315931 -12122549 - L2 LINE L2 -33 3280 3183 2139 104 0 14 chr17 73315932 73316221 -12122259 + AluSx SINE Alu 1 285 -27 382 99 55 0 chr17 73316221 73316312 -12122168 + (TA)n Simple_repeat Simple_repeat 1 96 0 1439 194 49 22 chr17 73316362 73316686 -12121794 + MER7A DNA MER2_type 16 346 0 350 332 131 20 chr17 73316691 73316890 -12121590 - L2 LINE L2 -172 3141 2921 * 1078 309 133 65 chr17 73316881 73317060 -12121420 - L2 LINE L2 -912 2402 2237 544 62 25 0 chr17 73317060 73317141 -12121339 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 1078 309 133 65 chr17 73317141 73317309 -12121171 - L2 LINE L2 -1077 2237 2082 2276 170 14 45 chr17 73317309 73317755 -12120725 - MSTB1 LTR MaLR 0 432 1 1078 309 133 65 chr17 73317755 73318484 -12119996 - L2 LINE L2 -1232 2082 1252 1709 185 3 17 chr17 73318496 73318798 -12119682 - AluJb SINE Alu -14 298 1 888 128 8 0 chr17 73318798 73318923 -12119557 - AluJb SINE Alu -177 135 10 206 182 0 45 chr17 73318937 73318981 -12119499 - L2 LINE L2 -2094 1220 1179 593 142 106 26 chr17 73319687 73319800 -12118680 - FLAM_C SINE Alu 0 143 22 1632 167 45 39 chr17 73320799 73321134 -12117346 + MER1B DNA MER1_type 1 337 0 1541 215 0 17 chr17 73321503 73321827 -12116653 - AluJb SINE Alu 0 319 1 278 240 52 21 chr17 73323240 73323336 -12115144 + MLT1J LTR MaLR 376 474 -37 508 167 11 132 chr17 73323385 73323559 -12114921 - MER96B DNA MER1_type? -264 153 1 2798 3 0 0 chr17 73323656 73323956 -12114524 + AluY SINE Alu 8 307 -4 2664 55 0 0 chr17 73324472 73324781 -12113699 + AluY SINE Alu 1 309 -2 1774 151 36 0 chr17 73324812 73325090 -12113390 - AluJb SINE Alu -15 297 10 2367 94 0 0 chr17 73325164 73325463 -12113017 - AluSg1 SINE Alu -10 299 1 187 217 167 0 chr17 73325470 73325530 -12112950 - MIR SINE MIR -113 149 80 1180 250 36 21 chr17 73325610 73325946 -12112534 - MER58B DNA MER1_type 0 341 1 2353 56 0 0 chr17 73326239 73326545 -12111935 - AluY SINE Alu 0 306 1 21 0 0 0 chr17 73327358 73327379 -12111101 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 73329420 73329443 -12109037 + AT_rich Low_complexity Low_complexity 1 23 0 655 244 86 112 chr17 73331946 73332260 -12106220 + L1ME4a LINE L1 5592 5888 -233 894 136 8 0 chr17 73332260 73332392 -12106088 + FLAM_C SINE Alu 1 133 0 655 244 86 112 chr17 73332392 73332602 -12105878 + L1ME4a LINE L1 5888 6102 -19 3137 22 0 0 chr17 73332677 73333041 -12105439 - L1PA2 LINE L1 0 6155 5792 1964 9 0 0 chr17 73333041 73333272 -12105208 + L1PA2 LINE L1 5572 5802 -353 2883 3 0 0 chr17 73333348 73333659 -12104821 + AluYa5 SINE Alu 1 311 0 21 71 0 0 chr17 73336589 73336631 -12101849 + AT_rich Low_complexity Low_complexity 1 42 0 234 0 0 0 chr17 73338099 73338125 -12100355 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 35 0 0 chr17 73338970 73338999 -12099481 + GC_rich Low_complexity Low_complexity 1 29 0 182 114 0 29 chr17 73340796 73340831 -12097649 + (CCCCCT)n Simple_repeat Simple_repeat 4 37 0 225 0 0 0 chr17 73341862 73341887 -12096593 + (A)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr17 73347577 73347602 -12090878 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr17 73348614 73348648 -12089832 + (T)n Simple_repeat Simple_repeat 1 34 0 35 54 0 0 chr17 73349533 73349589 -12088891 + AT_rich Low_complexity Low_complexity 1 56 0 833 252 9 9 chr17 73350034 73350252 -12088228 - MER58A DNA MER1_type -6 218 1 741 323 27 0 chr17 73350530 73350753 -12087727 - MIR SINE MIR -30 232 4 21 0 0 0 chr17 73351224 73351245 -12087235 + AT_rich Low_complexity Low_complexity 1 21 0 613 164 27 18 chr17 73351729 73351839 -12086641 + MER81 DNA DNA 3 113 -1 188 298 0 0 chr17 73352760 73352807 -12085673 - MIR SINE MIR 0 262 216 333 125 0 0 chr17 73353299 73353355 -12085125 + (TC)n Simple_repeat Simple_repeat 2 57 0 637 210 11 15 chr17 73353972 73354247 -12084233 + CT-rich Low_complexity Low_complexity 1 273 0 449 254 77 33 chr17 73357407 73357588 -12080892 - L1ME1 LINE L1 -13 6153 5965 724 193 0 0 chr17 73357674 73357824 -12080656 - L1MA6 LINE L1 -10 6290 6141 1014 289 74 11 chr17 73357953 73358386 -12080094 + LTR26 LTR ERV1 144 603 0 4475 146 6 25 chr17 73358387 73359236 -12079244 - L1MA6 LINE L1 -162 6138 5306 1452 172 14 3 chr17 73359394 73359691 -12078789 - L1MA6 LINE L1 -867 5279 4980 219 167 0 0 chr17 73360015 73360057 -12078423 + (TA)n Simple_repeat Simple_repeat 2 43 0 234 0 0 0 chr17 73360800 73360826 -12077654 + (T)n Simple_repeat Simple_repeat 1 26 0 297 89 0 0 chr17 73361551 73361596 -12076884 + (CA)n Simple_repeat Simple_repeat 2 46 0 22 0 0 0 chr17 73361876 73361898 -12076582 + AT_rich Low_complexity Low_complexity 1 22 0 722 293 116 57 chr17 73361974 73362725 -12075755 - L1M4 LINE L1 -3104 3042 2248 533 270 7 7 chr17 73363402 73363441 -12075039 - MER5A DNA MER1_type -51 138 100 2300 77 0 0 chr17 73363441 73363727 -12074753 - AluY SINE Alu -1 310 25 533 270 7 7 chr17 73363727 73363824 -12074656 - MER5A DNA MER1_type -88 101 2 198 103 0 0 chr17 73364173 73364202 -12074278 + (A)n Simple_repeat Simple_repeat 1 29 0 1276 128 19 0 chr17 73364367 73364578 -12073902 + L1PA16 LINE L1 5952 6166 0 185 435 26 13 chr17 73364713 73364867 -12073613 - L2 LINE L2 -249 3023 2868 969 186 21 0 chr17 73364869 73365062 -12073418 + MER20 DNA MER1_type 23 219 0 1688 191 3 10 chr17 73365253 73365593 -12072887 + AluJo SINE Alu 1 312 0 197 355 0 0 chr17 73365636 73365698 -12072782 - L2 LINE L2 -666 2648 2587 2320 92 0 0 chr17 73366701 73367029 -12071451 + AluSg SINE Alu 1 328 0 3183 184 15 20 chr17 73368627 73369275 -12069205 - L1PA16 LINE L1 0 6166 5522 2441 64 0 0 chr17 73370267 73370563 -12067917 - AluY SINE Alu -15 296 1 830 233 57 22 chr17 73370611 73370839 -12067641 - MIR SINE MIR -26 236 1 24 53 0 0 chr17 73371400 73371438 -12067042 + AT_rich Low_complexity Low_complexity 1 38 0 249 214 18 18 chr17 73372365 73372421 -12066059 + L2 LINE L2 3215 3270 -2 428 326 21 0 chr17 73372932 73373073 -12065407 + MIR SINE MIR 99 242 -20 339 315 46 8 chr17 73373483 73373613 -12064867 + MER20B DNA MER1_type 6 140 -643 22 0 0 0 chr17 73373719 73373741 -12064739 + AT_rich Low_complexity Low_complexity 1 22 0 2227 119 0 0 chr17 73375499 73375802 -12062678 - AluSx SINE Alu -9 303 1 1853 164 7 3 chr17 73376003 73376308 -12062172 - AluJb SINE Alu -4 308 3 28 0 0 0 chr17 73377078 73377106 -12061374 + AT_rich Low_complexity Low_complexity 1 28 0 250 207 90 63 chr17 73377156 73377267 -12061213 + L1ME4a LINE L1 5982 6095 -26 273 364 63 26 chr17 73377699 73378184 -12060296 + L2 LINE L2 2446 3007 -265 775 264 69 37 chr17 73378359 73378605 -12059875 - MIR SINE MIR -5 257 4 31 44 0 0 chr17 73379487 73379532 -12058948 + AT_rich Low_complexity Low_complexity 1 45 0 370 240 7 7 chr17 73380379 73380525 -12057955 + CT-rich Low_complexity Low_complexity 2 147 0 187 333 40 60 chr17 73380606 73380715 -12057765 + L3 LINE CR1 1272 1379 -198 2295 96 3 0 chr17 73380715 73381018 -12057462 + AluSg SINE Alu 1 304 -6 187 333 40 60 chr17 73381018 73381058 -12057422 + L3 LINE CR1 1379 1418 -159 21 0 0 0 chr17 73381076 73381097 -12057383 + AT_rich Low_complexity Low_complexity 1 21 0 316 218 182 0 chr17 73381097 73381207 -12057273 - MIR SINE MIR 0 262 133 21 0 0 0 chr17 73381605 73381626 -12056854 + AT_rich Low_complexity Low_complexity 1 21 0 2261 132 3 40 chr17 73381973 73382303 -12056177 + THE1B LTR MaLR 1 317 -47 2360 70 0 24 chr17 73382303 73382601 -12055879 - AluY SINE Alu -18 293 3 2261 132 3 40 chr17 73382601 73382648 -12055832 + THE1B LTR MaLR 317 364 0 9950 114 48 3 chr17 73382648 73384161 -12054319 + THE1B-int LTR MaLR 1 1580 0 2230 156 3 8 chr17 73384161 73384527 -12053953 + THE1B LTR MaLR 1 364 0 28 29 0 0 chr17 73384543 73384578 -12053902 + AT_rich Low_complexity Low_complexity 1 35 0 565 209 11 17 chr17 73387238 73387415 -12051065 + CT-rich Low_complexity Low_complexity 2 177 0 801 244 0 17 chr17 73388010 73388186 -12050294 + MER58A DNA MER1_type 46 218 -6 1072 308 85 67 chr17 73389735 73390404 -12048076 - MER115 DNA AcHobo -10 683 3 528 322 81 21 chr17 73391928 73392164 -12046316 - MIR SINE MIR -1 261 12 22 0 0 0 chr17 73393116 73393138 -12045342 + AT_rich Low_complexity Low_complexity 1 22 0 384 76 89 32 chr17 73393138 73393295 -12045185 + (TATAA)n Simple_repeat Simple_repeat 1 166 0 2187 114 0 0 chr17 73393536 73393833 -12044647 + AluSc SINE Alu 1 297 -12 188 0 74 0 chr17 73395136 73395163 -12043317 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2069 136 0 0 chr17 73396293 73396587 -12041893 - AluSx SINE Alu -18 294 1 65 0 0 0 chr17 73396668 73396733 -12041747 + AT_rich Low_complexity Low_complexity 1 65 0 224 349 40 32 chr17 73397660 73397786 -12040694 - MIR3 SINE MIR -52 156 30 258 105 0 0 chr17 73397851 73397889 -12040591 + (CA)n Simple_repeat Simple_repeat 1 38 0 1284 155 0 5 chr17 73397917 73398130 -12040350 - AluJb SINE Alu -19 293 82 198 118 0 0 chr17 73398821 73398855 -12039625 + (TG)n Simple_repeat Simple_repeat 2 35 0 310 161 21 42 chr17 73398861 73399004 -12039476 + (CAGAGA)n Simple_repeat Simple_repeat 3 142 0 243 0 0 0 chr17 73399985 73400012 -12038468 + (T)n Simple_repeat Simple_repeat 1 27 0 2141 107 13 0 chr17 73400037 73400336 -12038144 - AluSp SINE Alu -10 303 1 312 27 0 0 chr17 73401216 73401253 -12037227 + (CA)n Simple_repeat Simple_repeat 2 38 0 657 268 112 13 chr17 73401277 73401501 -12036979 + MIR SINE MIR 2 247 -15 525 318 78 57 chr17 73401521 73401635 -12036845 - L2 LINE L2 -696 2618 2508 2336 82 110 0 chr17 73401635 73401963 -12036517 - THE1B LTR MaLR 0 364 1 525 318 78 57 chr17 73401963 73402389 -12036091 - L2 LINE L2 -806 2508 2067 231 305 24 0 chr17 73402397 73402479 -12036001 + L1ME LINE L1 137 220 -5985 588 287 104 67 chr17 73402571 73403187 -12035293 + L1ME LINE L1 165 803 -5593 476 299 51 30 chr17 73403210 73403609 -12034871 + L1ME LINE L1 774 1403 -4812 2876 177 26 9 chr17 73403609 73404181 -12034299 + L1MB3 LINE L1 5585 6166 -17 643 261 34 102 chr17 73404631 73405241 -12033239 + L1MDa LINE L1 1463 2031 -4509 262 327 56 9 chr17 73405258 73405365 -12033115 + MLT1I LTR MaLR 162 273 -136 950 78 16 0 chr17 73405435 73405563 -12032917 + MLT2A1 LTR ERVL 1 130 -314 * 1378 113 0 57 chr17 73405536 73405765 -12032715 + MLT2A1 LTR ERVL 71 286 -158 392 75 0 0 chr17 73405768 73405821 -12032659 + MLT2A1 LTR ERVL 392 444 0 257 274 121 40 chr17 73405969 73406093 -12032387 + L2 LINE L2 3180 3313 0 1916 276 161 16 chr17 73406337 73406685 -12031795 - L2 LINE L2 -586 2728 2432 6526 74 20 0 chr17 73406685 73407845 -12030635 - L1PA8 LINE L1 -3 6169 5003 1916 276 161 16 chr17 73407845 73408322 -12030158 - L2 LINE L2 -882 2432 1783 28 29 0 0 chr17 73409650 73409685 -12028795 + AT_rich Low_complexity Low_complexity 1 35 0 200 274 18 53 chr17 73409953 73410066 -12028414 - MIR SINE MIR -7 255 147 24 100 0 0 chr17 73410584 73410664 -12027816 + AT_rich Low_complexity Low_complexity 1 80 0 2349 225 40 13 chr17 73413103 73413624 -12024856 - MLT1F LTR MaLR -5 537 3 21 0 0 0 chr17 73413638 73413659 -12024821 + AT_rich Low_complexity Low_complexity 1 21 0 318 161 32 0 chr17 73413879 73413941 -12024539 - MIR SINE MIR -126 136 73 288 346 115 12 chr17 73414003 73414246 -12024234 - LTR33 LTR ERVL -18 503 236 248 292 90 22 chr17 73414928 73415017 -12023463 + L2 LINE L2 3178 3272 0 570 184 0 10 chr17 73415137 73415240 -12023240 + AluJb SINE Alu 201 302 -10 656 307 59 0 chr17 73415246 73415448 -12023032 - MIR SINE MIR -18 244 31 183 284 60 52 chr17 73415463 73415579 -12022901 + L2 LINE L2 2232 2348 -966 25 31 0 0 chr17 73416405 73416437 -12022043 + AT_rich Low_complexity Low_complexity 1 32 0 676 311 28 49 chr17 73416656 73416942 -12021538 + L1MEd LINE L1 275 554 -5565 467 176 12 12 chr17 73417149 73417234 -12021246 + MER5A DNA MER1_type 26 110 -79 904 254 30 17 chr17 73417264 73417500 -12020980 + MER8 DNA MER2_type 1 239 0 521 270 44 87 chr17 73417525 73418091 -12020389 + L1MEd LINE L1 716 1257 -4862 334 274 141 34 chr17 73418138 73418217 -12020263 + L1MEd LINE L1 1348 1417 -4893 2079 151 0 3 chr17 73418217 73418529 -12019951 + AluSx SINE Alu 1 311 -1 334 274 141 34 chr17 73418529 73418683 -12019797 + L1MEd LINE L1 1417 1606 -4704 293 254 28 14 chr17 73418730 73418801 -12019679 + MER5A DNA MER1_type 23 94 -95 1481 199 6 29 chr17 73418851 73419162 -12019318 - AluJo SINE Alu -8 304 1 298 284 49 12 chr17 73419164 73419245 -12019235 - MER5A DNA MER1_type -80 109 26 657 95 32 0 chr17 73419851 73419946 -12018534 - AluY SINE Alu -8 303 206 481 295 154 0 chr17 73420053 73420209 -12018271 + MER5A DNA MER1_type 9 188 -1 210 281 50 86 chr17 73420441 73420580 -12017900 + MER5B DNA MER1_type 29 162 -16 447 301 164 55 chr17 73420660 73421062 -12017418 - MLT1J2 LTR MaLR -4 446 1 364 304 57 71 chr17 73421091 73421427 -12017053 + L2 LINE L2 2286 2616 -698 318 123 18 53 chr17 73421713 73421770 -12016710 - MER44D DNA MER2_type -3 602 548 294 360 108 0 chr17 73421810 73421949 -12016531 + L2 LINE L2 3107 3260 -12 1048 247 97 10 chr17 73422717 73423025 -12015455 - MER63 DNA MER1_type -264 797 463 303 333 26 26 chr17 73423198 73423354 -12015126 + MIR SINE MIR 12 167 -95 448 323 179 19 chr17 73423542 73423804 -12014676 - L2 LINE L2 -14 3299 3080 1881 212 25 52 chr17 73423804 73424323 -12014157 + MLT1D LTR MaLR 1 505 0 448 323 179 19 chr17 73424323 73424653 -12013827 - L2 LINE L2 -233 3080 2621 276 121 96 12 chr17 73425055 73425138 -12013342 - LTR37B LTR ERV1 0 468 379 24 32 0 0 chr17 73425208 73425239 -12013241 + AT_rich Low_complexity Low_complexity 1 31 0 228 273 13 0 chr17 73425626 73425703 -12012777 + (CTA)n Simple_repeat Simple_repeat 2 79 0 299 343 187 16 chr17 73426135 73426386 -12012094 + L2 LINE L2 2671 2964 -350 254 233 27 27 chr17 73426977 73427050 -12011430 - MIR3 SINE MIR -52 156 84 1680 194 3 3 chr17 73427198 73427507 -12010973 - AluJo SINE Alu -3 309 1 759 325 66 24 chr17 73427856 73428145 -12010335 - LTR16C LTR ERVL -57 434 134 24 0 0 0 chr17 73428759 73428783 -12009697 + AT_rich Low_complexity Low_complexity 1 24 0 585 254 70 67 chr17 73429307 73429591 -12008889 + L1ME LINE L1 502 786 -5284 2302 93 0 0 chr17 73429912 73430212 -12008268 + AluSg1 SINE Alu 1 300 -9 760 236 43 79 chr17 73431368 73431788 -12006692 - LTR37B LTR ERV1 -3 465 61 190 269 39 0 chr17 73432451 73432503 -12005977 - L2 LINE L2 -9 3263 3210 1821 170 41 23 chr17 73432610 73432952 -12005528 + MER7A DNA MER2_type 1 346 0 1643 94 5 5 chr17 73433000 73433223 -12005257 + AluSg/x SINE Alu 88 310 0 326 157 0 14 chr17 73433546 73433616 -12004864 + CT-rich Low_complexity Low_complexity 4 72 0 1030 93 11 22 chr17 73433630 73433812 -12004668 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 448 224 95 9 chr17 73433860 73433976 -12004504 - AluSg/x SINE Alu -51 261 136 2051 183 8 10 chr17 73434204 73434593 -12003887 - MLT1B LTR MaLR -2 388 1 255 309 179 32 chr17 73436338 73436461 -12002019 - L2 LINE L2 0 3272 3132 1937 103 19 0 chr17 73436553 73436849 -12001631 + AluSx SINE Alu 17 317 0 1694 288 86 13 chr17 73437041 73437586 -12000894 + MLT1E LTR MaLR 1 585 -8 1301 224 17 48 chr17 73438067 73438102 -12000378 - MER58B DNA MER1_type -2079 341 306 2527 188 31 23 chr17 73438102 73438617 -11999863 + MLT2B1 LTR ERVL 2 520 0 2224 116 91 13 chr17 73438620 73439017 -11999463 + MSTA LTR MaLR 1 428 0 1301 224 17 48 chr17 73439017 73439329 -11999151 - MER58B DNA MER1_type -2116 304 1 2522 44 0 3 chr17 73441585 73441882 -11996598 + AluY SINE Alu 1 296 -15 2057 119 3 14 chr17 73442461 73442747 -11995733 + AluJb SINE Alu 3 285 -27 225 344 13 20 chr17 73442747 73442939 -11995541 + (TATG)n Simple_repeat Simple_repeat 1 190 0 265 247 130 0 chr17 73443463 73443540 -11994940 + MIR3 SINE MIR 118 204 -4 408 263 11 0 chr17 73443601 73443696 -11994784 - AluSg/x SINE Alu -12 300 205 628 170 9 0 chr17 73443697 73443809 -11994671 - AluJo/FLAM SINE Alu -199 113 1 334 256 0 33 chr17 73445797 73445887 -11992593 - L1MC4 LINE L1 -1342 6700 6614 788 139 0 0 chr17 73445940 73446069 -11992411 - L1PB3 LINE L1 0 6154 6026 249 249 259 41 chr17 73446324 73446521 -11991959 + MIR SINE MIR 13 252 -10 219 355 40 0 chr17 73446648 73446724 -11991756 + L2 LINE L2 3234 3312 -1 201 359 29 0 chr17 73446720 73446823 -11991657 - L3b LINE CR1 -374 1209 1104 * 22 0 0 0 chr17 73446896 73446918 -11991562 + AT_rich Low_complexity Low_complexity 1 22 0 648 295 43 10 chr17 73447165 73447372 -11991108 + MIR SINE MIR 49 262 0 300 305 7 33 chr17 73447479 73447630 -11990850 + L1ME LINE L1 5688 5834 -287 314 325 82 12 chr17 73448914 73449081 -11989399 + MIR SINE MIR 2 181 -72 1967 157 0 10 chr17 73449651 73449963 -11988517 + AluJb SINE Alu 1 309 -3 3497 95 39 2 chr17 73451506 73451999 -11986481 + MER9 LTR ERVK 1 511 0 195 222 0 0 chr17 73452392 73452437 -11986043 + GA-rich Low_complexity Low_complexity 4 48 0 3685 159 18 18 chr17 73453686 73454423 -11984057 - L1MA7 LINE L1 -6 6285 5549 4676 186 35 16 chr17 73454429 73455573 -11982907 + L1MA7 LINE L1 4420 5582 -720 2137 110 41 39 chr17 73456030 73456393 -11982087 + THE1B LTR MaLR 1 364 0 2304 113 0 3 chr17 73456433 73456744 -11981736 + AluSx SINE Alu 1 310 -2 408 368 57 5 chr17 73456747 73456959 -11981521 + L1ME LINE L1 5477 5699 -422 425 356 19 78 chr17 73456960 73457381 -11981099 + L2 LINE L2 2847 3242 -30 797 269 11 28 chr17 73457395 73457677 -11980803 + L1MA9 LINE L1 5998 6274 -38 272 262 205 16 chr17 73458144 73458266 -11980214 - MIR SINE MIR 0 262 118 284 342 0 0 chr17 73458983 73459062 -11979418 + MIR SINE MIR 66 144 -64 23 0 0 0 chr17 73460081 73460104 -11978376 + AT_rich Low_complexity Low_complexity 1 23 0 189 338 13 0 chr17 73461121 73461198 -11977282 - L2 LINE L2 0 3313 3236 2208 68 9 74 chr17 73461269 73461595 -11976885 + AluY SINE Alu 1 305 -6 201 162 27 0 chr17 73462253 73462290 -11976190 + (CTTA)n Simple_repeat Simple_repeat 1 38 0 302 356 107 29 chr17 73462433 73462778 -11975702 - L3 LINE CR1 -709 868 497 235 299 55 39 chr17 73463150 73463277 -11975203 - MIR SINE MIR -17 245 117 5182 88 9 29 chr17 73463279 73464038 -11974442 + L1PA10 LINE L1 5415 6158 -10 21 36 0 0 chr17 73465354 73465382 -11973098 + AT_rich Low_complexity Low_complexity 1 28 0 380 312 46 0 chr17 73465889 73465998 -11972482 + MIR SINE MIR 32 145 -63 3533 159 27 6 chr17 73466000 73466662 -11971818 + L1MA4 LINE L1 5617 6292 -8 22 0 0 0 chr17 73466662 73466684 -11971796 + AT_rich Low_complexity Low_complexity 1 22 0 279 250 0 0 chr17 73466738 73466822 -11971658 + (TA)n Simple_repeat Simple_repeat 1 84 0 318 269 31 100 chr17 73466831 73466961 -11971519 + MER5B DNA MER1_type 58 178 0 2030 85 0 0 chr17 73467485 73467733 -11970747 - AluSg SINE Alu -62 248 1 2183 109 7 0 chr17 73468144 73468446 -11970034 + AluSg1 SINE Alu 1 304 -5 258 309 82 47 chr17 73468803 73469036 -11969444 - L2 LINE L2 -1218 2096 1856 2297 60 0 0 chr17 73469122 73469449 -11969031 - AluY SINE Alu 0 327 1 4637 261 89 29 chr17 73469506 73471870 -11966610 - L1MCb LINE L1 -1332 5609 2751 815 185 0 7 chr17 73471870 73472016 -11966464 - L1MC1 LINE L1 -1 6332 6188 4637 261 89 29 chr17 73472016 73473513 -11964967 - L1MCb LINE L1 -4190 2751 1344 1393 235 58 42 chr17 73473745 73474179 -11964301 - L1MCb LINE L1 -5959 464 24 513 229 92 14 chr17 73474681 73474907 -11963573 + MLT1H1 LTR MaLR 309 503 -2 21 0 0 0 chr17 73478822 73478843 -11959637 + AT_rich Low_complexity Low_complexity 1 21 0 230 255 29 78 chr17 73478883 73478985 -11959495 - MIR SINE MIR -54 208 112 2495 71 0 0 chr17 73478999 73479296 -11959184 - AluY SINE Alu -14 297 1 440 208 38 9 chr17 73480363 73480469 -11958011 + L1MA6 LINE L1 6191 6299 -1 26 30 0 0 chr17 73480469 73480502 -11957978 + AT_rich Low_complexity Low_complexity 1 33 0 2484 224 19 39 chr17 73480974 73481591 -11956889 - L1M4 LINE L1 -5930 612 8 350 278 86 37 chr17 73481616 73481778 -11956702 - L2 LINE L2 -562 2752 2583 238 261 0 43 chr17 73482755 73482824 -11955656 + L2 LINE L2 3248 3313 0 1243 228 48 61 chr17 73482844 73483239 -11955241 - MLT1B LTR MaLR 0 390 1 1581 166 57 0 chr17 73484212 73484543 -11953937 - L1 LINE L1 -1503 4643 4294 * 3045 187 50 18 chr17 73484540 73485699 -11952781 + L1M2 LINE L1 4587 5771 -541 622 96 0 0 chr17 73487088 73487171 -11951309 - AluY SINE Alu -228 83 1 23 0 0 0 chr17 73488241 73488264 -11950216 + AT_rich Low_complexity Low_complexity 1 23 0 2414 115 60 14 chr17 73488540 73488958 -11949522 - L1PB2 LINE L1 -1 6150 5714 4337 57 4 0 chr17 73489430 73489976 -11948504 - L1PA6 LINE L1 -4 6150 5603 222 128 0 0 chr17 73490716 73490755 -11947725 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 311 301 212 15 chr17 73491285 73491488 -11946992 + MIR SINE MIR 20 262 0 1119 271 104 17 chr17 73491929 73492322 -11946158 - MLT1E2 LTR MaLR 0 626 184 2153 115 7 3 chr17 73492322 73492617 -11945863 - AluSc SINE Alu -11 298 3 1119 271 104 17 chr17 73492617 73492696 -11945784 - MLT1E2 LTR MaLR -442 184 113 2228 95 0 0 chr17 73493421 73493733 -11944747 - AluSg SINE Alu 0 312 1 22 0 0 0 chr17 73494533 73494555 -11943925 + AT_rich Low_complexity Low_complexity 1 22 0 325 214 20 0 chr17 73495418 73495516 -11942964 + (TA)n Simple_repeat Simple_repeat 1 100 0 2575 48 0 19 chr17 73495906 73496222 -11942258 - AluY SINE Alu -1 310 1 215 390 0 24 chr17 73496888 73496970 -11941510 - MIR SINE MIR -98 110 31 426 316 133 0 chr17 73497048 73497206 -11941274 + MIR SINE MIR 47 225 -37 353 268 48 32 chr17 73497826 73497953 -11940527 + MIR SINE MIR 30 157 -51 250 294 22 22 chr17 73498984 73499076 -11939404 - MIR SINE MIR -87 121 30 23 86 0 0 chr17 73499130 73499188 -11939292 + AT_rich Low_complexity Low_complexity 1 58 0 2110 131 3 0 chr17 73500414 73500711 -11937769 + AluSx SINE Alu 3 300 -12 1220 173 0 49 chr17 73501566 73501809 -11936671 - AluJo SINE Alu -9 303 73 2312 203 46 2 chr17 73501989 73502471 -11936009 - MLT1D LTR MaLR 0 505 3 223 374 30 30 chr17 73502618 73502784 -11935696 + L2 LINE L2 2872 3037 -235 275 385 38 27 chr17 73503974 73504236 -11934244 - L2 LINE L2 -438 2876 2612 348 24 0 0 chr17 73504541 73504582 -11933898 + (TG)n Simple_repeat Simple_repeat 1 41 0 1834 77 0 0 chr17 73505805 73506051 -11932429 - L1PA12 LINE L1 0 6168 5923 2095 114 3 0 chr17 73506793 73507083 -11931397 + AluSx SINE Alu 6 296 -16 4516 52 4 0 chr17 73508446 73509007 -11929473 + L1PA7 LINE L1 5592 6154 0 22 0 0 0 chr17 73509007 73509029 -11929451 + AT_rich Low_complexity Low_complexity 1 22 0 883 203 132 5 chr17 73509172 73509369 -11929111 + MER58A DNA MER1_type 3 224 0 2194 153 47 37 chr17 73509644 73510050 -11928430 - MSTB LTR MaLR -16 410 1 192 300 0 17 chr17 73510602 73510662 -11927818 - MIR SINE MIR -46 216 158 403 265 10 10 chr17 73510807 73510909 -11927571 - MIR SINE MIR -153 109 8 190 324 0 28 chr17 73510973 73511044 -11927436 - L2 LINE L2 -18 3254 3186 299 344 71 43 chr17 73511342 73511734 -11926746 + L2 LINE L2 1983 2385 -929 360 302 162 1 chr17 73512493 73512696 -11925784 + MIR SINE MIR 16 248 -14 738 144 8 17 chr17 73512875 73512993 -11925487 - AluJb SINE Alu -190 122 6 1509 203 18 11 chr17 73513155 73513441 -11925039 + AluJo SINE Alu 11 298 -14 720 274 76 28 chr17 73513463 73513903 -11924577 - MLT1D LTR MaLR 0 505 1 248 294 42 50 chr17 73513906 73514025 -11924455 - MIR SINE MIR -28 234 117 275 117 0 19 chr17 73514415 73514474 -11924006 - L1MA9 LINE L1 -4 6289 6230 284 290 103 45 chr17 73515927 73516082 -11922398 + MIR SINE MIR 5 168 -94 299 363 41 14 chr17 73516383 73516529 -11921951 - MIR SINE MIR -106 156 7 871 293 106 20 chr17 73516544 73516902 -11921578 + MLT1I LTR MaLR 13 401 -8 624 118 0 0 chr17 73517023 73517107 -11921373 + MLT1A1 LTR MaLR 1 84 -281 1144 221 96 65 chr17 73517107 73517491 -11920989 + MSTD LTR MaLR 1 396 0 * 1433 187 33 4 chr17 73517491 73517759 -11920721 + MLT1A1 LTR MaLR 80 355 -10 372 297 0 10 chr17 73517768 73517869 -11920611 + MER63A DNA MER1_type 97 196 -14 413 255 265 20 chr17 73518397 73518601 -11919879 + MLT1J2 LTR MaLR 1 254 -196 1663 192 3 7 chr17 73518834 73519121 -11919359 + AluJo SINE Alu 3 288 -24 328 232 174 14 chr17 73519246 73519384 -11919096 + LTR16A LTR ERVL 34 193 -257 2164 115 52 25 chr17 73520189 73520554 -11917926 - THE1C LTR MaLR 0 375 1 487 350 24 20 chr17 73520761 73521000 -11917480 - MIR SINE MIR 0 262 26 256 298 0 48 chr17 73523069 73523153 -11915327 - L2 LINE L2 -7 3265 3186 458 213 0 106 chr17 73523252 73523393 -11915087 + MER20 DNA MER1_type 1 126 -93 324 191 0 117 chr17 73523556 73523650 -11914830 + MER20 DNA MER1_type 132 214 -5 628 215 110 30 chr17 73523941 73524141 -11914339 - MIR SINE MIR -14 248 33 450 253 114 13 chr17 73524222 73524380 -11914100 + MIR SINE MIR 79 252 -10 1497 215 51 43 chr17 73524803 73525194 -11913286 - MSTD LTR MaLR -2 394 1 288 0 0 0 chr17 73525280 73525312 -11913168 + (TG)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr17 73526095 73526117 -11912363 + AT_rich Low_complexity Low_complexity 1 22 0 1422 89 0 30 chr17 73526140 73526343 -11912137 + MER107 DNA MER1_type 1 197 0 218 389 22 7 chr17 73526836 73526973 -11911507 + L2 LINE L2 220 358 -2956 876 223 16 0 chr17 73526973 73527157 -11911323 - MER5A DNA MER1_type -1 188 2 6296 127 15 15 chr17 73527169 73528554 -11909926 + L1PA14 LINE L1 4775 6161 0 2001 114 46 0 chr17 73528565 73528845 -11909635 + AluSc SINE Alu 1 293 -16 605 375 41 33 chr17 73528846 73529186 -11909294 + L2 LINE L2 358 703 -2611 3694 183 28 42 chr17 73529186 73529982 -11908498 + LTR1 LTR ERV1 1 785 0 605 375 41 33 chr17 73529982 73530033 -11908447 + L2 LINE L2 703 752 -2562 225 279 72 95 chr17 73530060 73530282 -11908198 + L2 LINE L2 1068 1284 -2030 479 355 50 16 chr17 73530335 73530577 -11907903 + MIR SINE MIR 13 262 0 21 57 0 0 chr17 73531180 73531215 -11907265 + AT_rich Low_complexity Low_complexity 1 35 0 1950 97 53 40 chr17 73531744 73532044 -11906436 - AluSc SINE Alu -5 304 1 286 323 21 0 chr17 73532266 73532362 -11906118 + MIR SINE MIR 155 252 -10 725 265 105 17 chr17 73532703 73533096 -11905384 - L1ME3A LINE L1 -2 6162 5725 295 299 85 31 chr17 73533420 73533644 -11904836 - L1MEc LINE L1 -4578 1818 1583 1206 159 53 4 chr17 73535346 73535577 -11902903 - L1MA9 LINE L1 -240 6072 5826 381 312 32 49 chr17 73535603 73535850 -11902630 - HERV16 LTR ERVL -3817 1179 937 2220 116 0 0 chr17 73535897 73536189 -11902291 + AluSx SINE Alu 1 292 -20 3171 221 70 15 chr17 73536890 73537802 -11900678 - Charlie1 DNA MER1_type -166 2595 1634 2509 64 0 0 chr17 73537804 73538101 -11900379 + AluY SINE Alu 1 297 -14 1509 116 0 0 chr17 73539354 73539561 -11898919 - AluSg/x SINE Alu 0 310 104 2064 105 10 27 chr17 73539837 73540132 -11898348 - AluSp SINE Alu -23 290 1 260 359 8 34 chr17 73540838 73540955 -11897525 + MIR SINE MIR 21 134 -128 369 319 7 37 chr17 73541562 73541697 -11896783 + L2 LINE L2 3142 3272 0 987 323 35 44 chr17 73542600 73543370 -11895110 + L2 LINE L2 2545 3306 -7 337 271 132 7 chr17 73544619 73544763 -11893717 - MIR SINE MIR -16 246 85 407 280 25 17 chr17 73544991 73545109 -11893371 - L2 LINE L2 -9 3304 3186 293 127 0 70 chr17 73545780 73545851 -11892629 - MLT2B1 LTR ERVL 0 520 455 1150 219 11 69 chr17 73545891 73546165 -11892315 - MLT2B1 LTR ERVL -54 466 209 2200 115 8 46 chr17 73546174 73546540 -11891940 - THE1C LTR MaLR -23 352 1 1105 154 6 0 chr17 73546540 73546719 -11891761 - MLT2B1 LTR ERVL -307 213 34 884 311 98 11 chr17 73546828 73547300 -11891180 + LTR33 LTR ERVL 5 517 -4 1248 150 71 18 chr17 73547413 73547639 -11890841 - AluSg/x SINE Alu -8 302 65 1877 191 45 100 chr17 73547656 73548450 -11890030 - LTR8A LTR ERV1 0 727 1 322 301 116 14 chr17 73548460 73548606 -11889874 - MIR SINE MIR -61 201 41 28 0 0 0 chr17 73548636 73548664 -11889816 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 73549610 73549631 -11888849 + AT_rich Low_complexity Low_complexity 1 21 0 204 214 0 0 chr17 73550032 73550074 -11888406 + CT-rich Low_complexity Low_complexity 1 42 0 27 49 0 0 chr17 73550640 73550681 -11887799 + AT_rich Low_complexity Low_complexity 1 41 0 3228 129 2 41 chr17 73550812 73551347 -11887133 + L1PA16 LINE L1 5627 6140 -26 228 100 0 0 chr17 73551347 73551387 -11887093 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr17 73552237 73552259 -11886221 + AT_rich Low_complexity Low_complexity 1 22 0 370 317 77 18 chr17 73552274 73552495 -11885985 - L1ME4a LINE L1 -289 5832 5599 26 50 0 0 chr17 73552705 73552745 -11885735 + AT_rich Low_complexity Low_complexity 1 40 0 300 288 62 62 chr17 73552903 73553063 -11885417 - MLT1I LTR MaLR -165 244 85 1363 85 0 0 chr17 73554611 73554787 -11883693 + AluY SINE Alu 136 311 0 2578 55 0 0 chr17 73554794 73555101 -11883379 + AluY SINE Alu 2 308 -3 22 0 0 0 chr17 73556282 73556304 -11882176 + AT_rich Low_complexity Low_complexity 1 22 0 198 167 0 0 chr17 73556505 73556541 -11881939 + (TATATG)n Simple_repeat Simple_repeat 5 40 0 1657 155 103 66 chr17 73556907 73557287 -11881193 - MER57A LTR ERV1 0 403 10 470 160 0 112 chr17 73557292 73557417 -11881063 - MER57A-int LTR ERV1 -2 7535 7425 830 153 110 63 chr17 73557417 73557735 -11880745 - LTR54 LTR ERV1 -121 377 1 805 224 0 0 chr17 73557735 73557878 -11880602 - MER57A-int LTR ERV1 -393 7144 7002 558 312 80 25 chr17 73557908 73558306 -11880174 - HERVL LTR ERVL -3284 2480 2002 294 29 0 0 chr17 73558317 73558352 -11880128 + (CATTT)n Simple_repeat Simple_repeat 4 38 0 1678 173 7 0 chr17 73558352 73558629 -11879851 - AluJo SINE Alu -33 279 1 375 287 83 52 chr17 73559062 73559292 -11879188 - HERVL LTR ERVL -3710 1286 1050 318 286 51 0 chr17 73559305 73559403 -11879077 + L1MC4 LINE L1 6601 6703 -1339 309 322 0 0 chr17 73559375 73559462 -11879018 - L1MC4 LINE L1 -1339 6703 6617 * 276 281 0 0 chr17 73559464 73559553 -11878927 + (TA)n Simple_repeat Simple_repeat 2 90 0 2204 98 3 0 chr17 73559554 73559840 -11878640 - AluSp SINE Alu -26 287 1 185 62 0 31 chr17 73561115 73561147 -11877333 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 247 315 105 0 chr17 73561207 73561369 -11877111 - L2 LINE L2 -115 3198 3020 26 64 0 0 chr17 73562000 73562047 -11876433 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 53 chr17 73562073 73562091 -11876389 + AT_rich Low_complexity Low_complexity 1 18 -18 1962 134 0 7 chr17 73562091 73562397 -11876083 + AluSx SINE Alu 1 304 0 23 0 0 53 chr17 73562397 73562415 -11876065 + AT_rich Low_complexity Low_complexity 18 36 0 864 171 9 91 chr17 73563216 73563352 -11875128 + L1M2 LINE L1 5547 5661 -639 2384 91 3 0 chr17 73563352 73563661 -11874819 + AluY SINE Alu 2 311 0 864 171 9 91 chr17 73563661 73563773 -11874707 + L1M2 LINE L1 5661 5781 -519 213 195 52 13 chr17 73563903 73563980 -11874500 + (TATAA)n Simple_repeat Simple_repeat 3 82 0 1826 193 29 2 chr17 73564107 73564516 -11873964 - Zaphod DNA AcHobo -11 4020 3601 40 67 0 0 chr17 73564567 73564642 -11873838 + AT_rich Low_complexity Low_complexity 1 75 0 1756 290 92 11 chr17 73564713 73565519 -11872961 - Zaphod DNA AcHobo -3159 872 2 29 0 0 0 chr17 73566143 73566172 -11872308 + AT_rich Low_complexity Low_complexity 1 29 0 2036 145 0 0 chr17 73566334 73566630 -11871850 - AluSx SINE Alu -14 298 3 2593 72 3 61 chr17 73566699 73566947 -11871533 + THE1A LTR MaLR 1 221 -134 1883 103 0 31 chr17 73566947 73567237 -11871243 + AluSq SINE Alu 22 302 -11 2593 72 3 61 chr17 73567237 73567365 -11871115 + THE1A LTR MaLR 221 355 0 427 271 36 91 chr17 73568252 73568581 -11869899 - L1MEd LINE L1 -4925 1194 884 2424 67 0 7 chr17 73569071 73569369 -11869111 - AluSq SINE Alu -16 297 2 1605 190 74 6 chr17 73569416 73569780 -11868700 - MLT1B LTR MaLR 0 390 2 325 275 42 96 chr17 73570367 73570534 -11867946 - L3 LINE CR1 -228 1349 1192 22 0 0 0 chr17 73571471 73571493 -11866987 + AT_rich Low_complexity Low_complexity 1 22 0 585 244 97 38 chr17 73571592 73571911 -11866569 + Charlie2 DNA MER1_type 2507 2844 -18 186 182 0 0 chr17 73574149 73574182 -11864298 + L2 LINE L2 3193 3225 -47 505 223 71 47 chr17 73574280 73574491 -11863989 - L1MC5 LINE L1 -475 7486 7271 1253 269 16 30 chr17 73574640 73575075 -11863405 - L1ME LINE L1 -426 5744 5316 2002 152 33 28 chr17 73576129 73576491 -11861989 - THE1B LTR MaLR 0 364 1 950 136 7 0 chr17 73576894 73577034 -11861446 + THE1C LTR MaLR 1 141 -234 2116 108 59 3 chr17 73577034 73577357 -11861123 + THE1C-int LTR MaLR 1236 1576 -4 2155 120 61 17 chr17 73577361 73577720 -11860760 + THE1C LTR MaLR 1 375 0 450 36 0 0 chr17 73577937 73577993 -11860487 + (CA)n Simple_repeat Simple_repeat 1 56 0 317 338 84 39 chr17 73578029 73578493 -11859987 - L2 LINE L2 -1558 1756 1272 208 116 0 47 chr17 73580050 73580093 -11858387 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 180 0 0 0 chr17 73580945 73580965 -11857515 + (A)n Simple_repeat Simple_repeat 1 20 0 498 178 33 0 chr17 73581088 73581178 -11857302 - MER5A DNA MER1_type -83 106 14 250 224 397 9 chr17 73581547 73581663 -11856817 - MIR SINE MIR 0 262 102 230 291 32 73 chr17 73582288 73582508 -11855972 - L1ME3A LINE L1 -233 5937 5727 686 283 6 0 chr17 73582608 73582774 -11855706 + MER5B DNA MER1_type 1 167 -11 451 61 15 0 chr17 73585268 73585334 -11853146 + MADE1 DNA Mariner 14 80 0 516 32 0 0 chr17 73585567 73585629 -11852851 + (CA)n Simple_repeat Simple_repeat 2 63 0 240 301 0 14 chr17 73585941 73586014 -11852466 + T-rich Low_complexity Low_complexity 4 75 0 872 266 22 22 chr17 73586056 73586278 -11852202 - MIR SINE MIR -25 237 16 2546 69 0 17 chr17 73589209 73589556 -11848924 - L1PA8 LINE L1 0 6172 5832 329 231 130 9 chr17 73589821 73589929 -11848551 + LTR67 LTR ERVL 434 554 -3 4315 65 0 0 chr17 73590251 73590802 -11847678 - L1PA7 LINE L1 -7 6147 5597 618 293 43 47 chr17 73590834 73591030 -11847450 - MIR SINE MIR -30 232 36 2255 106 3 0 chr17 73591030 73591333 -11847147 - AluSq SINE Alu -9 304 1 618 293 43 47 chr17 73591333 73591368 -11847112 - MIR SINE MIR -226 36 2 271 231 98 38 chr17 73593635 73593740 -11844740 + MIR SINE MIR 7 124 -84 505 242 62 8 chr17 73593761 73593889 -11844591 + MIR SINE MIR 80 214 -48 343 215 15 0 chr17 73594053 73594118 -11844362 - L2 LINE L2 -244 3069 3004 308 320 55 8 chr17 73594124 73594252 -11844228 + L1ME LINE L1 5383 5516 -658 2262 116 111 7 chr17 73594288 73594371 -11844109 + L1PB2 LINE L1 5702 5775 -376 2593 62 0 0 chr17 73594371 73594675 -11843805 + AluSg SINE Alu 1 304 -6 2262 116 111 7 chr17 73594675 73594997 -11843483 + L1PB2 LINE L1 5775 6149 -2 225 226 160 38 chr17 73595165 73595271 -11843209 + L1ME LINE L1 5681 5799 -322 231 254 51 0 chr17 73595772 73595831 -11842649 - L2 LINE L2 -8 3264 3203 499 194 24 32 chr17 73596151 73596275 -11842205 - MIR SINE MIR -59 203 81 300 348 37 27 chr17 73597658 73597845 -11840635 - ERVL LTR ERVL -948 4816 4628 589 168 113 65 chr17 73597851 73598036 -11840444 - ORSL DNA AcHobo 0 275 82 303 380 14 0 chr17 73598187 73598329 -11840151 - ERVL LTR ERVL -1201 4563 4420 307 344 10 0 chr17 73598395 73598491 -11839989 - ERVL LTR ERVL -1492 4272 4176 435 349 19 15 chr17 73598618 73598879 -11839601 - ERVL LTR ERVL -1754 4010 3749 266 333 43 7 chr17 73599075 73599216 -11839264 - ERVL LTR ERVL -2330 3434 3289 688 252 32 0 chr17 73599244 73599399 -11839081 - MER63A DNA MER1_type -24 186 27 1081 237 103 46 chr17 73599564 73599952 -11838528 - LTR16C LTR ERVL -3 488 79 213 175 0 0 chr17 73600667 73600707 -11837773 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr17 73600706 73600733 -11837747 + (GA)n Simple_repeat Simple_repeat 1 27 0 * 695 222 88 0 chr17 73601820 73602036 -11836444 - L1MA4 LINE L1 -6 6294 6060 290 273 0 23 chr17 73602746 73602834 -11835646 - MER94 DNA DNA -40 94 9 234 0 0 0 chr17 73603089 73603115 -11835365 + (CA)n Simple_repeat Simple_repeat 2 27 0 348 256 288 21 chr17 73604030 73604221 -11834259 + MIR SINE MIR 21 262 0 510 256 92 41 chr17 73605099 73605294 -11833186 - MIR SINE MIR 0 262 58 301 261 35 0 chr17 73605598 73605713 -11832767 - HAL1b LINE L1 -242 1106 988 276 241 152 0 chr17 73605764 73605922 -11832558 - HAL1b LINE L1 -547 801 620 1049 127 18 0 chr17 73606227 73606392 -11832088 + L1PA13 LINE L1 5575 5742 -419 597 102 10 20 chr17 73606408 73606506 -11831974 + L1PA13 LINE L1 6061 6157 -6 1407 226 0 9 chr17 73606515 73606838 -11831642 + L1M4 LINE L1 3716 4035 -2111 2119 128 0 13 chr17 73607088 73607393 -11831087 - AluSx SINE Alu -11 301 1 263 333 12 32 chr17 73607393 73607639 -11830841 + L1MEc LINE L1 655 895 -5501 248 257 150 18 chr17 73607641 73607754 -11830726 + MIR SINE MIR 70 197 -65 330 257 93 21 chr17 73607951 73608091 -11830389 + MIR SINE MIR 76 225 -37 1068 325 56 3 chr17 73608263 73608620 -11829860 + L3 LINE CR1 1180 1555 -22 241 330 57 19 chr17 73609446 73609552 -11828928 - L2 LINE L2 0 3272 3163 22 0 0 0 chr17 73609600 73609622 -11828858 + AT_rich Low_complexity Low_complexity 1 22 0 2164 131 0 0 chr17 73609676 73609967 -11828513 - AluSg SINE Alu -19 291 1 2365 103 0 0 chr17 73610575 73610885 -11827595 - AluSx SINE Alu -2 310 1 315 286 13 0 chr17 73610903 73610980 -11827500 + MER5B DNA MER1_type 1 78 -100 473 269 46 0 chr17 73610981 73611111 -11827369 + MER58B DNA MER1_type 206 341 0 1133 167 44 19 chr17 73611392 73611662 -11826818 + L1MA7 LINE L1 6015 6291 0 1695 174 68 84 chr17 73612000 73612513 -11825967 - MLT1D LTR MaLR 0 505 1 231 211 179 135 chr17 73612559 73612715 -11825765 + LTR67 LTR ERVL 34 196 -361 356 217 132 9 chr17 73612987 73613093 -11825387 + LTR67 LTR ERVL 434 552 -5 7197 46 0 0 chr17 73613431 73614526 -11823954 - L1PA7 LINE L1 -13 6141 5050 613 203 135 0 chr17 73616178 73616326 -11822154 - MER58B DNA MER1_type -2 339 172 262 250 0 16 chr17 73617157 73617221 -11821259 + MER5A DNA MER1_type 10 72 -117 360 241 37 0 chr17 73617330 73617438 -11821042 + (TGAA)n Simple_repeat Simple_repeat 4 115 0 562 290 75 58 chr17 73619389 73620207 -11818273 + L1MC4a LINE L1 4531 5377 -769 3435 151 78 18 chr17 73620315 73620914 -11817566 + L1MC1 LINE L1 5616 6259 -74 2105 143 27 3 chr17 73620914 73621243 -11817237 + MER1B DNA MER1_type 1 337 0 3435 151 78 18 chr17 73621243 73621299 -11817181 + L1MC1 LINE L1 6259 6310 -23 * 5221 248 82 34 chr17 73621295 73623293 -11815187 + L1MC4a LINE L1 5491 7585 -223 495 227 25 18 chr17 73623286 73623449 -11815031 + L1MD3 LINE L1 7822 7985 -10 * 198 71 0 0 chr17 73623610 73623638 -11814842 + (TG)n Simple_repeat Simple_repeat 1 28 0 2100 129 3 0 chr17 73624392 73624687 -11813793 - AluSq SINE Alu -17 296 1 529 318 71 63 chr17 73625104 73625485 -11812995 + L2 LINE L2 2849 3232 -81 296 269 65 11 chr17 73625545 73625638 -11812842 - MIR SINE MIR -121 141 44 362 164 0 0 chr17 73625874 73625929 -11812551 - MER81 DNA DNA -3 111 57 1292 209 30 54 chr17 73625957 73626227 -11812253 - MLT1A1 LTR MaLR -1 364 104 2122 113 95 15 chr17 73626227 73626564 -11811916 - THE1B LTR MaLR 0 364 1 1292 209 30 54 chr17 73626564 73626666 -11811814 - MLT1A1 LTR MaLR -261 104 1 31 0 0 0 chr17 73627348 73627379 -11811101 + AT_rich Low_complexity Low_complexity 1 31 0 250 276 82 10 chr17 73627622 73627720 -11810760 - MIR SINE MIR -64 198 94 284 123 12 49 chr17 73627806 73627887 -11810593 + (GGGGA)n Simple_repeat Simple_repeat 3 80 0 22 35 0 0 chr17 73627963 73627992 -11810488 + AT_rich Low_complexity Low_complexity 1 29 0 2192 99 7 0 chr17 73628809 73629103 -11809377 - AluSx SINE Alu -16 296 1 23 0 0 0 chr17 73629166 73629189 -11809291 + AT_rich Low_complexity Low_complexity 1 23 0 188 33 0 33 chr17 73629196 73629226 -11809254 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 4975 156 19 3 chr17 73629517 73630374 -11808106 + L1MC1 LINE L1 5463 6332 -1 2214 102 3 7 chr17 73630451 73630756 -11807724 - AluSx SINE Alu -8 304 1 25 31 0 0 chr17 73630926 73630958 -11807522 + AT_rich Low_complexity Low_complexity 1 32 0 624 141 28 34 chr17 73632291 73632468 -11806012 + GA-rich Low_complexity Low_complexity 3 178 0 720 288 70 14 chr17 73632506 73632919 -11805561 - L1M4 LINE L1 -4892 1963 1528 234 105 0 0 chr17 73632925 73632963 -11805517 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 5230 101 10 5 chr17 73632963 73633755 -11804725 - L1PA10 LINE L1 -21 6147 5352 1404 143 8 0 chr17 73633752 73633997 -11804483 + L1P LINE L1 4330 4576 -1570 * 267 162 103 130 chr17 73633989 73634174 -11804306 - L1M4 LINE L1 -5332 1527 1348 * 2432 194 11 54 chr17 73634809 73635344 -11803136 - MLT2B2 LTR ERVL -3 512 1 189 171 0 0 chr17 73635344 73635379 -11803101 + (TATG)n Simple_repeat Simple_repeat 3 37 0 3578 142 25 8 chr17 73635379 73635860 -11802620 - Tigger3(Golem) DNA MER2_type 0 3028 2532 2311 112 22 27 chr17 73635860 73636226 -11802254 - THE1B LTR MaLR 0 364 1 3578 142 25 8 chr17 73636226 73636372 -11802108 - Tigger3(Golem) DNA MER2_type -496 2532 2390 41285 29 21 1 chr17 73636375 73642406 -11796074 + L1HS LINE L1 1 6155 0 195 42 0 0 chr17 73642410 73642434 -11796046 + (A)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr17 73642919 73642941 -11795539 + AT_rich Low_complexity Low_complexity 1 22 0 195 257 27 40 chr17 73644373 73644447 -11794033 + MIR3 SINE MIR 100 172 -36 266 305 19 67 chr17 73644468 73644573 -11793907 + MIR SINE MIR 47 146 -62 4007 90 5 5 chr17 73644653 73645207 -11793273 - MER41A LTR ERV1 0 554 1 1788 166 0 7 chr17 73645242 73645549 -11792931 + AluSx SINE Alu 1 305 0 263 245 85 28 chr17 73645893 73645999 -11792481 + MER94 DNA DNA 8 119 -15 232 210 16 0 chr17 73646030 73646092 -11792388 - MLT1J LTR MaLR -10 501 439 348 208 28 0 chr17 73646264 73646336 -11792144 - MLT1J LTR MaLR -319 192 119 23 33 0 0 chr17 73646384 73646414 -11792066 + AT_rich Low_complexity Low_complexity 1 30 0 1345 127 9 33 chr17 73646466 73646678 -11791802 + AluSg/x SINE Alu 96 302 -10 609 284 117 23 chr17 73646951 73647465 -11791015 - L1 LINE L1 -3430 3358 2797 628 358 42 18 chr17 73647706 73648092 -11790388 - L1 LINE L1 -4359 2430 2036 372 256 30 30 chr17 73648247 73648415 -11790065 + HERVK22 LTR ERVK 4439 4606 -2231 333 0 0 0 chr17 73650005 73650042 -11788438 + (CA)n Simple_repeat Simple_repeat 2 38 0 491 174 10 0 chr17 73650044 73650142 -11788338 - L1M2 LINE L1 -507 5793 5695 * 2370 256 61 59 chr17 73650141 73650312 -11788168 - L1 LINE L1 -4802 1987 1818 2256 125 0 0 chr17 73650312 73650615 -11787865 - AluSx SINE Alu -9 303 1 2370 256 61 59 chr17 73650615 73651376 -11787104 - L1 LINE L1 -4971 1818 1053 805 261 16 27 chr17 73651443 73651700 -11786780 + L1ME3A LINE L1 5714 5967 -203 227 337 28 55 chr17 73651782 73651963 -11786517 + L2 LINE L2 2669 2844 -470 26 50 0 0 chr17 73652721 73652761 -11785719 + AT_rich Low_complexity Low_complexity 1 40 0 232 255 0 0 chr17 73653042 73653089 -11785391 + MIR3 SINE MIR 117 163 -45 1361 238 51 36 chr17 73653349 73653819 -11784661 - L1ME2 LINE L1 -89 6075 5599 26 30 0 0 chr17 73653819 73653852 -11784628 + AT_rich Low_complexity Low_complexity 1 33 0 2112 121 3 16 chr17 73654237 73654543 -11783937 - AluSx SINE Alu -10 302 1 727 266 6 0 chr17 73654619 73654796 -11783684 + MER5B DNA MER1_type 1 178 0 1891 147 30 12 chr17 73655997 73656330 -11782150 - MER44D DNA MER2_type 0 609 1 24 0 0 0 chr17 73657940 73657964 -11780516 + AT_rich Low_complexity Low_complexity 1 24 0 251 308 0 0 chr17 73658452 73658517 -11779963 + MLT1J2 LTR MaLR 69 133 -317 414 267 34 34 chr17 73658633 73658779 -11779701 + MLT1J LTR MaLR 333 478 -33 2404 35 0 0 chr17 73659415 73659703 -11778777 - L1PA4 LINE L1 -3 6152 5865 1944 98 0 4 chr17 73659751 73660005 -11778475 - AluSq SINE Alu -14 299 47 180 295 13 26 chr17 73660021 73660099 -11778381 + L3 LINE CR1 818 894 -683 347 104 30 0 chr17 73660099 73660166 -11778314 + L1PA16 LINE L1 6098 6166 0 274 344 89 6 chr17 73660368 73660525 -11777955 + L3 LINE CR1 1027 1196 -381 307 260 62 51 chr17 73661492 73661669 -11776811 - MARNA DNA Mariner -280 306 128 218 365 0 0 chr17 73661815 73661900 -11776580 + MIR3 SINE MIR 81 165 -43 2314 107 0 0 chr17 73661900 73662208 -11776272 + AluSx SINE Alu 1 308 -4 2056 153 0 0 chr17 73663311 73663611 -11774869 - AluSx SINE Alu -12 300 1 21 0 0 0 chr17 73665119 73665140 -11773340 + AT_rich Low_complexity Low_complexity 1 21 0 597 28 0 0 chr17 73666929 73667000 -11771480 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 439 253 99 43 chr17 73667895 73668057 -11770423 - MLT1E1 LTR MaLR -483 171 1 186 43 0 0 chr17 73668080 73668103 -11770377 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 879 267 96 32 chr17 73668159 73668691 -11769789 - HAL1b LINE L1 -504 844 279 24 32 0 0 chr17 73668960 73668991 -11769489 + AT_rich Low_complexity Low_complexity 1 31 0 2543 91 8 3 chr17 73669678 73670031 -11768449 + THE1A LTR MaLR 1 355 0 23 0 0 0 chr17 73670080 73670103 -11768377 + AT_rich Low_complexity Low_complexity 1 23 0 5030 117 31 7 chr17 73670329 73671090 -11767390 + LTR17 LTR ERV1 1 780 0 259 257 188 10 chr17 73671302 73671403 -11767077 + L2 LINE L2 3195 3313 0 33 25 0 0 chr17 73671930 73671970 -11766510 + AT_rich Low_complexity Low_complexity 1 40 0 211 295 213 33 chr17 73672176 73672298 -11766182 + MIR3 SINE MIR 4 147 -61 316 381 88 30 chr17 73672421 73672744 -11765736 + L2 LINE L2 2687 3024 -248 2475 102 31 11 chr17 73673172 73673526 -11764954 + THE1B LTR MaLR 4 364 0 2428 140 41 14 chr17 73673560 73673973 -11764507 + MSTA LTR MaLR 1 424 -4 456 339 56 25 chr17 73675955 73676241 -11762239 + LTR33 LTR ERVL 1 295 -226 1226 54 0 0 chr17 73677116 73677263 -11761217 + AluY SINE Alu 163 309 -2 5452 156 91 1 chr17 73677418 73678354 -11760126 - LTR28 LTR ERV1 0 1020 1 21 0 0 0 chr17 73678736 73678757 -11759723 + AT_rich Low_complexity Low_complexity 1 21 0 957 270 165 41 chr17 73679192 73679659 -11758821 - MLT1F LTR MaLR -15 527 3 402 190 1 0 chr17 73680407 73680487 -11757993 - L1MA3 LINE L1 -26 6274 6199 226 325 102 45 chr17 73681056 73681321 -11757159 + L2 LINE L2 2690 2969 -345 1183 163 0 0 chr17 73681408 73681580 -11756900 - AluSx SINE Alu -138 174 3 341 138 0 0 chr17 73681842 73681900 -11756580 - L1PA16 LINE L1 -9 6157 6100 1402 194 64 0 chr17 73681901 73682231 -11756249 + L1 LINE L1 4120 4470 -1676 480 162 8 86 chr17 73682231 73682348 -11756132 - LTR40c LTR ERVL -265 200 93 27 29 0 0 chr17 73682488 73682522 -11755958 + AT_rich Low_complexity Low_complexity 1 34 0 965 170 82 26 chr17 73682672 73682866 -11755614 + MER2 DNA MER2_type 3 207 -138 223 96 39 19 chr17 73682869 73682921 -11755559 + T-rich Low_complexity Low_complexity 2 54 0 1509 87 5 5 chr17 73682924 73683132 -11755348 - AluSg/x SINE Alu -4 308 101 305 230 68 0 chr17 73683161 73683235 -11755245 + MER2 DNA MER2_type 267 345 0 2351 40 4 0 chr17 73683446 73683756 -11754724 - AluY SINE Alu 0 316 6 21 0 0 0 chr17 73683760 73683781 -11754699 + AT_rich Low_complexity Low_complexity 1 21 0 2128 108 0 25 chr17 73683931 73684246 -11754234 - AluSc SINE Alu -2 307 1 600 261 123 28 chr17 73684307 73684518 -11753962 + MIR SINE MIR 32 262 0 2045 131 7 23 chr17 73684547 73684852 -11753628 - AluSq SINE Alu -11 302 3 21 0 0 0 chr17 73685313 73685334 -11753146 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr17 73685388 73685423 -11753057 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr17 73685628 73685656 -11752824 + AT_rich Low_complexity Low_complexity 1 28 0 1797 242 120 12 chr17 73686170 73686901 -11751579 - L1ME3 LINE L1 -22 6140 5331 297 292 143 45 chr17 73687038 73687527 -11750953 - L1ME3 LINE L1 -924 5222 4686 296 348 12 6 chr17 73687546 73687707 -11750773 - L1ME3 LINE L1 -2017 4129 3968 2272 96 17 0 chr17 73687968 73688261 -11750219 + AluSg SINE Alu 1 298 -12 237 293 104 19 chr17 73688864 73689134 -11749346 + L1ME LINE L1 797 1089 -4981 364 271 34 42 chr17 73689881 73689999 -11748481 + MIR SINE MIR 46 162 -100 929 241 13 27 chr17 73690166 73690390 -11748090 + MER58A DNA MER1_type 2 222 -2 1183 77 61 7 chr17 73692288 73692478 -11746002 + L1MA1 LINE L1 6099 6290 -10 213 153 42 0 chr17 73692514 73692586 -11745894 + (TA)n Simple_repeat Simple_repeat 2 76 0 23 0 0 0 chr17 73692600 73692623 -11745857 + AT_rich Low_complexity Low_complexity 1 23 0 3543 134 4 6 chr17 73692863 73693391 -11745089 - MER1A DNA MER1_type 0 527 1 2604 40 0 7 chr17 73694364 73694667 -11743813 - AluY SINE Alu -10 301 1 1603 134 57 64 chr17 73695853 73696151 -11742329 + AluJb SINE Alu 1 296 -16 563 285 65 90 chr17 73696905 73697427 -11741053 - L2 LINE L2 0 3313 2805 1243 112 0 0 chr17 73697447 73697634 -11740846 - L1PA13 LINE L1 -1 6162 5976 306 252 107 0 chr17 73700030 73700161 -11738319 - L1ME3 LINE L1 -2153 3993 3849 230 259 0 116 chr17 73700447 73700559 -11737921 - MER103 DNA DNA -2 164 66 27 0 0 0 chr17 73700746 73700773 -11737707 + AT_rich Low_complexity Low_complexity 1 27 0 200 310 202 31 chr17 73701669 73701798 -11736682 - MIR3 SINE MIR -54 154 4 496 311 71 14 chr17 73703167 73703379 -11735101 - MIR SINE MIR 0 262 39 685 173 0 8 chr17 73703808 73703935 -11734545 - L1PB3 LINE L1 -3 6151 6026 305 173 0 0 chr17 73704120 73704172 -11734308 + L1MC4 LINE L1 6652 6703 -1339 295 206 0 19 chr17 73704177 73704284 -11734196 + (TA)n Simple_repeat Simple_repeat 2 106 0 185 146 21 0 chr17 73704380 73704428 -11734052 + (TA)n Simple_repeat Simple_repeat 1 49 0 1738 161 0 17 chr17 73704877 73705169 -11733311 + AluJb SINE Alu 1 287 -25 471 100 0 0 chr17 73705175 73705245 -11733235 + (TG)n Simple_repeat Simple_repeat 1 70 0 237 397 15 7 chr17 73705652 73705788 -11732692 + MIR SINE MIR 8 144 -118 302 154 0 15 chr17 73706838 73706860 -11731620 + (TA)n Simple_repeat Simple_repeat 1 22 -42 6949 126 42 7 chr17 73706860 73708047 -11730433 + Tigger3b DNA MER2_type 3 1231 0 302 154 0 15 chr17 73708047 73708089 -11730391 + (TA)n Simple_repeat Simple_repeat 22 64 0 4213 100 2 0 chr17 73708112 73708711 -11729769 - L1PA13 LINE L1 0 6163 5564 207 304 43 0 chr17 73711070 73711139 -11727341 + MIR SINE MIR 154 225 -37 2393 39 0 26 chr17 73712408 73712715 -11725765 + AluY SINE Alu 1 299 -12 3425 109 45 0 chr17 73712724 73713263 -11725217 - L1PA13 LINE L1 -2 6161 5599 21 0 0 0 chr17 73713341 73713362 -11725118 + AT_rich Low_complexity Low_complexity 1 21 0 2303 80 3 0 chr17 73713831 73714120 -11724360 - AluY SINE Alu -15 296 7 21 0 0 0 chr17 73715188 73715209 -11723271 + AT_rich Low_complexity Low_complexity 1 21 0 633 272 41 12 chr17 73715544 73715713 -11722767 + MER91A DNA MER1_type 6 179 -17 3755 239 41 23 chr17 73715869 73716869 -11721611 - MER45B DNA AcHobo -22 1018 1 1621 179 21 11 chr17 73720240 73720519 -11717961 - AluJb SINE Alu -30 282 1 2497 24 41 0 chr17 73721632 73721924 -11716556 - AluY SINE Alu -7 304 1 561 55 0 0 chr17 73722662 73722735 -11715745 + (CA)n Simple_repeat Simple_repeat 2 74 0 216 292 67 11 chr17 73722799 73722888 -11715592 + MIR SINE MIR 47 140 -122 190 133 22 22 chr17 73723136 73723181 -11715299 + (TA)n Simple_repeat Simple_repeat 1 45 0 21 36 0 0 chr17 73723308 73723336 -11715144 + AT_rich Low_complexity Low_complexity 1 28 0 209 309 71 12 chr17 73723483 73723567 -11714913 - L2 LINE L2 -20 3252 3164 258 265 15 15 chr17 73723847 73723915 -11714565 - L2 LINE L2 -37 3235 3168 1425 244 18 69 chr17 73724422 73724926 -11713554 + MLT1D LTR MaLR 28 505 0 208 365 79 11 chr17 73724946 73725135 -11713345 - L2 LINE L2 -499 2815 2614 300 228 144 24 chr17 73725785 73725952 -11712528 - L1M4 LINE L1 -743 5403 5217 21 26 0 26 chr17 73726109 73726125 -11712355 + AT_rich Low_complexity Low_complexity 1 16 -22 2030 130 3 0 chr17 73726125 73726410 -11712070 - AluSp SINE Alu -27 286 1 21 26 0 26 chr17 73726410 73726432 -11712048 + AT_rich Low_complexity Low_complexity 16 38 0 2861 253 37 28 chr17 73726441 73727404 -11711076 - L1ME1 LINE L1 -5 6286 5299 1015 161 6 0 chr17 73727561 73727722 -11710758 + FRAM SINE Alu 1 161 -15 286 276 102 24 chr17 73728454 73728581 -11709899 + L2 LINE L2 3175 3311 -2 1201 203 17 56 chr17 73729268 73729627 -11708853 + L1MD3 LINE L1 7650 7994 -1 22 0 0 0 chr17 73729671 73729693 -11708787 + AT_rich Low_complexity Low_complexity 1 22 0 290 128 75 0 chr17 73731868 73731962 -11706518 + (TA)n Simple_repeat Simple_repeat 1 101 0 284 244 104 44 chr17 73734650 73734785 -11703695 - MIR SINE MIR -8 254 112 25 0 0 0 chr17 73735514 73735539 -11702941 + AT_rich Low_complexity Low_complexity 1 25 0 230 311 0 0 chr17 73736620 73736681 -11701799 + L1MC/D LINE L1 5535 5595 -2213 23 0 0 0 chr17 73736790 73736813 -11701667 + AT_rich Low_complexity Low_complexity 1 23 0 339 65 0 0 chr17 73738091 73738137 -11700343 + (CA)n Simple_repeat Simple_repeat 1 46 0 304 323 100 68 chr17 73738339 73738590 -11699890 + MIR SINE MIR 4 262 0 685 227 96 106 chr17 73739872 73740370 -11698110 - MER34B LTR ERV1 -66 499 7 357 125 0 0 chr17 73740398 73740454 -11698026 + (T)n Simple_repeat Simple_repeat 1 56 0 235 274 20 69 chr17 73740646 73740748 -11697732 - L1ME4a LINE L1 -80 6041 5945 63 57 0 0 chr17 73741450 73741555 -11696925 + AT_rich Low_complexity Low_complexity 1 105 0 22 56 0 0 chr17 73742693 73742729 -11695751 + AT_rich Low_complexity Low_complexity 1 36 0 1831 163 0 13 chr17 73742957 73743270 -11695210 - AluJb SINE Alu -3 309 1 26 0 0 0 chr17 73743413 73743439 -11695041 + AT_rich Low_complexity Low_complexity 1 26 0 469 278 80 6 chr17 73743465 73743641 -11694839 - MIR SINE MIR -1 261 73 5541 120 5 0 chr17 73743839 73744657 -11693823 - L1PA14 LINE L1 -2 6159 5338 261 323 99 50 chr17 73744872 73744930 -11693550 + L1MEc LINE L1 110 164 -6232 2202 108 3 0 chr17 73744930 73745227 -11693253 - AluSx SINE Alu -14 298 1 261 323 99 50 chr17 73745227 73745471 -11693009 + L1MEc LINE L1 164 427 -5969 428 261 103 54 chr17 73745795 73746224 -11692256 + L1MEc LINE L1 701 1150 -5055 1013 110 43 24 chr17 73746258 73746467 -11692013 + L1MA7 LINE L1 6079 6291 0 811 296 52 33 chr17 73746482 73746787 -11691693 + L1MEc LINE L1 1168 1491 -4905 189 0 0 0 chr17 73746787 73746808 -11691672 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 811 296 52 33 chr17 73746808 73747079 -11691401 + L1MEc LINE L1 1491 1755 -4641 600 250 61 7 chr17 73747135 73747283 -11691197 + MER58A DNA MER1_type 7 162 0 222 37 0 0 chr17 73748057 73748084 -11690396 + (A)n Simple_repeat Simple_repeat 1 27 0 306 0 0 0 chr17 73748228 73748262 -11690218 + (TG)n Simple_repeat Simple_repeat 2 35 0 1091 222 0 0 chr17 73748794 73749001 -11689479 - MER58A DNA MER1_type 0 224 18 216 270 63 16 chr17 73749295 73749358 -11689122 - MIR SINE MIR -140 122 57 2185 94 10 7 chr17 73749729 73750028 -11688452 - AluY SINE Alu -11 300 1 2248 99 0 31 chr17 73750596 73750919 -11687561 + AluSq SINE Alu 1 313 0 212 0 36 0 chr17 73752517 73752545 -11685935 + (TA)n Simple_repeat Simple_repeat 2 30 0 1805 177 0 0 chr17 73752677 73752977 -11685503 - AluJb SINE Alu -12 300 1 851 259 137 65 chr17 73753050 73753482 -11684998 - LTR16B LTR ERVL -1 463 1 22 0 0 0 chr17 73755424 73755446 -11683034 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr17 73755834 73755857 -11682623 + AT_rich Low_complexity Low_complexity 1 23 0 2291 114 0 0 chr17 73757067 73757373 -11681107 + AluSx SINE Alu 1 306 -6 25 31 0 0 chr17 73758158 73758190 -11680290 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr17 73758676 73758697 -11679783 + AT_rich Low_complexity Low_complexity 1 21 0 402 296 15 30 chr17 73758876 73759011 -11679469 - MLT1J LTR MaLR -238 273 141 5280 114 0 1 chr17 73759011 73759766 -11678714 + L1PA13 LINE L1 5367 6120 -43 839 256 36 52 chr17 73760044 73760353 -11678127 - L1ME LINE L1 -5762 308 5 304 353 42 0 chr17 73760357 73760476 -11678004 + L2 LINE L2 2960 3083 -230 194 280 0 0 chr17 73760838 73760888 -11677592 + L2 LINE L2 3104 3153 -160 420 223 77 46 chr17 73760964 73761094 -11677386 + L2 LINE L2 3180 3313 0 3501 117 53 28 chr17 73761497 73762096 -11676384 + LTR18B LTR ERVL 1 614 0 387 273 35 47 chr17 73762109 73762281 -11676199 + HERVL18 LTR ERVL 128 297 -5750 * 727 229 17 39 chr17 73762275 73762454 -11676026 + HERVL18 LTR ERVL 492 666 -5381 264 191 0 0 chr17 73762449 73762496 -11675984 + HERVL18 LTR ERVL 917 963 -5084 * 1125 168 20 5 chr17 73762481 73762840 -11675640 + HERVL18 LTR ERVL 1383 1810 -4237 664 133 18 4 chr17 73762902 73763064 -11675416 + HERVL18 LTR ERVL 2231 2452 -3595 * 4457 150 8 76 chr17 73763063 73763891 -11674589 + HERVL18 LTR ERVL 2720 3491 -2556 3689 92 53 43 chr17 73764052 73764658 -11673822 + LTR18B LTR ERVL 1 612 -2 1718 193 78 18 chr17 73764705 73765104 -11673376 + MLT1D LTR MaLR 72 494 -11 312 288 38 0 chr17 73765644 73765724 -11672756 - HAL1 LINE L1 -2412 95 13 903 158 105 18 chr17 73769675 73769846 -11668634 - AluJb SINE Alu 0 312 127 21 0 0 0 chr17 73770525 73770546 -11667934 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 73770626 73770647 -11667833 + AT_rich Low_complexity Low_complexity 1 21 0 841 250 0 40 chr17 73772455 73772683 -11665797 + MER20 DNA MER1_type 1 219 0 187 289 0 0 chr17 73772712 73772757 -11665723 + L2 LINE L2 3223 3267 -5 404 261 42 8 chr17 73773618 73773737 -11664743 - MIR SINE MIR -66 196 74 21 0 0 0 chr17 73774435 73774456 -11664024 + AT_rich Low_complexity Low_complexity 1 21 0 231 114 0 0 chr17 73776064 73776108 -11662372 + (T)n Simple_repeat Simple_repeat 1 44 0 24 0 0 0 chr17 73776500 73776524 -11661956 + AT_rich Low_complexity Low_complexity 1 24 0 1905 164 7 0 chr17 73777941 73778239 -11660241 + AluJb SINE Alu 1 300 -12 3521 140 10 0 chr17 73778686 73779208 -11659272 + MER1A DNA MER1_type 1 527 0 2180 111 3 0 chr17 73779988 73780286 -11658194 + AluSg SINE Alu 1 299 -11 2107 101 11 7 chr17 73783665 73783951 -11654529 - AluSq SINE Alu -24 289 3 325 284 61 66 chr17 73784688 73784885 -11653595 + L1MEd LINE L1 942 1137 -4982 2176 120 0 19 chr17 73784885 73785202 -11653278 + AluSx SINE Alu 1 311 -1 234 324 57 29 chr17 73785452 73785662 -11652818 + HAL1b LINE L1 399 614 -734 274 242 38 15 chr17 73785835 73785967 -11652513 + (TATAA)n Simple_repeat Simple_repeat 5 139 0 236 289 0 13 chr17 73786059 73786135 -11652345 - LTR67 LTR ERVL -21 536 462 13332 152 39 11 chr17 73786170 73786333 -11652147 + Tigger1 DNA MER2_type 35 192 -2226 5887 114 22 10 chr17 73786333 73787905 -11650575 - L1PA14 LINE L1 -17 6144 4563 13332 152 39 11 chr17 73787905 73790061 -11648419 + Tigger1 DNA MER2_type 192 2418 0 186 290 145 0 chr17 73791232 73791301 -11647179 + MER5B DNA MER1_type 53 131 -47 777 311 110 21 chr17 73791385 73791822 -11646658 - L2 LINE L2 0 3313 2838 1109 56 7 0 chr17 73792357 73792501 -11645979 + L1PA8 LINE L1 6021 6165 -7 210 71 0 0 chr17 73793816 73793844 -11644636 + (T)n Simple_repeat Simple_repeat 1 28 0 231 260 32 8 chr17 73794173 73794296 -11644184 + (TA)n Simple_repeat Simple_repeat 2 127 0 21 71 0 0 chr17 73794365 73794407 -11644073 + AT_rich Low_complexity Low_complexity 1 42 0 1851 127 19 26 chr17 73796626 73796767 -11641713 - AluSg SINE Alu -4 306 166 4247 101 66 11 chr17 73796767 73797419 -11641061 + LTR12 LTR ERV1 1 688 0 1851 127 19 26 chr17 73797419 73797585 -11640895 - AluSg SINE Alu -144 166 1 1102 168 101 5 chr17 73797852 73798061 -11640419 - MSTA LTR MaLR 0 428 200 994 201 21 0 chr17 73798061 73798250 -11640230 + LTR53 LTR ERVL 320 512 -7 822 80 212 0 chr17 73798459 73798610 -11639870 - MSTA LTR MaLR -244 184 2 1775 199 84 39 chr17 73798975 73799463 -11639017 - MER67D LTR ERV1 -4 510 1 483 271 136 49 chr17 73799466 73799981 -11638499 - LTR50 LTR ERVL -199 596 4 21 57 0 0 chr17 73800333 73800368 -11638112 + AT_rich Low_complexity Low_complexity 1 35 0 439 257 40 80 chr17 73800698 73800873 -11637607 - MIR SINE MIR -13 249 82 295 414 84 4 chr17 73800920 73801157 -11637323 - MIR SINE MIR -2 260 5 1312 111 0 0 chr17 73801259 73801440 -11637040 + L1PA13 LINE L1 5962 6142 -21 1288 244 4 4 chr17 73801744 73802010 -11636470 + Tigger7 DNA MER2_type 2 267 -466 1464 138 31 0 chr17 73802024 73802278 -11636202 - Tigger5 DNA MER2_type 0 2323 2062 356 143 32 16 chr17 73802274 73802337 -11636143 - Tigger5 DNA MER2_type -2259 64 1 * 352 159 57 0 chr17 73802339 73802406 -11636074 + Tigger7 DNA MER2_type 2405 2555 0 231 296 23 0 chr17 73803672 73803760 -11634720 + L1ME LINE L1 5566 5655 -466 275 167 0 0 chr17 73803808 73803856 -11634624 + L1ME LINE L1 5739 5786 -335 218 213 0 0 chr17 73804051 73804098 -11634382 + T-rich Low_complexity Low_complexity 1 47 0 6383 29 12 1 chr17 73804099 73804859 -11633621 - L1PA4 LINE L1 0 6155 5388 227 280 79 63 chr17 73805690 73805879 -11632601 + MLT1J2 LTR MaLR 21 212 -238 2358 79 0 0 chr17 73806322 73806613 -11631867 - AluSc SINE Alu -18 291 1 26 50 0 0 chr17 73807098 73807138 -11631342 + AT_rich Low_complexity Low_complexity 1 40 0 22 35 0 0 chr17 73807346 73807375 -11631105 + AT_rich Low_complexity Low_complexity 1 29 0 2050 115 13 30 chr17 73808350 73808655 -11629825 + AluSq SINE Alu 3 302 -11 439 264 33 43 chr17 73808736 73809036 -11629444 - L1MEc LINE L1 -4893 1670 1229 384 266 175 57 chr17 73809053 73809407 -11629073 - L1MEc LINE L1 -5264 1120 725 192 216 0 0 chr17 73810219 73810270 -11628210 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 934 340 130 27 chr17 73810939 73811539 -11626941 + L2 LINE L2 2316 2977 -337 2127 163 35 32 chr17 73811562 73812103 -11626377 + MLT2A2 LTR ERVL 1 548 -6 608 309 52 39 chr17 73812107 73812437 -11626043 + L2 LINE L2 2979 3312 -1 5915 111 20 26 chr17 73813689 73814641 -11623839 - L1MA2 LINE L1 0 6304 5359 1630 76 27 18 chr17 73814673 73814898 -11623582 + THE1C LTR MaLR 1 227 -148 1085 155 0 0 chr17 73814898 73815066 -11623414 + AluSg/x SINE Alu 127 294 -18 327 25 0 0 chr17 73816108 73816148 -11622332 + (TG)n Simple_repeat Simple_repeat 1 40 0 26 0 0 0 chr17 73816568 73816594 -11621886 + AT_rich Low_complexity Low_complexity 1 26 0 2502 90 119 5 chr17 73817066 73817468 -11621012 - LTR7 LTR ERV1 -2 448 1 21 57 0 0 chr17 73818701 73818736 -11619744 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr17 73819178 73819213 -11619267 + AT_rich Low_complexity Low_complexity 1 35 0 207 254 69 46 chr17 73819501 73819631 -11618849 + MIR SINE MIR 71 203 -59 219 167 0 0 chr17 73819665 73819707 -11618773 + (CA)n Simple_repeat Simple_repeat 2 43 0 333 363 139 23 chr17 73820322 73820710 -11617770 - L2 LINE L2 0 3272 2840 314 236 102 39 chr17 73820783 73820910 -11617570 - MIR SINE MIR -91 171 37 1927 114 0 0 chr17 73821223 73821485 -11616995 - AluSc SINE Alu -2 307 46 903 157 92 0 chr17 73821836 73821989 -11616491 + AluSg/x SINE Alu 134 300 -10 883 127 7 0 chr17 73823085 73823227 -11615253 + L1PA16 LINE L1 6019 6161 -5 3336 60 0 0 chr17 73823456 73823875 -11614605 - L1PA8 LINE L1 -8 6164 5746 278 241 96 12 chr17 73824032 73824115 -11614365 + MLT1H LTR MaLR 209 298 -251 258 319 82 82 chr17 73824517 73824787 -11613693 + L2 LINE L2 2072 2341 -973 209 234 16 0 chr17 73824811 73824875 -11613605 + GA-rich Low_complexity Low_complexity 4 68 0 223 186 0 0 chr17 73825325 73825368 -11613112 + T-rich Low_complexity Low_complexity 1 43 0 372 326 166 27 chr17 73825374 73825785 -11612695 - L2 LINE L2 -940 2374 1907 2460 131 48 17 chr17 73825910 73826331 -11612149 - MER57B LTR ERV1 0 434 1 1752 133 16 73 chr17 73826559 73826874 -11611606 - AluSx SINE Alu -15 297 1 772 327 96 19 chr17 73826902 73827373 -11611107 - LTR33 LTR ERVL 0 521 15 305 293 157 21 chr17 73827545 73827685 -11610795 + MIR SINE MIR 24 182 -80 23 0 0 0 chr17 73829373 73829396 -11609084 + AT_rich Low_complexity Low_complexity 1 23 0 694 254 46 5 chr17 73829768 73829965 -11608515 + L1M4 LINE L1 5 209 -6333 260 103 0 0 chr17 73830094 73830133 -11608347 - MADE1 DNA Mariner 0 80 42 184 365 19 10 chr17 73830246 73830350 -11608130 + L2 LINE L2 2179 2283 -1031 22 0 0 0 chr17 73830540 73830562 -11607918 + AT_rich Low_complexity Low_complexity 1 22 0 696 253 6 6 chr17 73831108 73831286 -11607194 - L1M4 LINE L1 -1892 4254 4077 298 303 73 0 chr17 73831676 73831785 -11606695 + MIR SINE MIR 65 181 -81 2526 57 0 0 chr17 73831819 73832116 -11606364 + AluY SINE Alu 3 299 -12 22 0 0 0 chr17 73832147 73832169 -11606311 + AT_rich Low_complexity Low_complexity 1 22 0 1431 191 19 50 chr17 73832940 73833302 -11605178 + L1MD3 LINE L1 7645 7995 0 22 0 0 0 chr17 73833658 73833680 -11604800 + AT_rich Low_complexity Low_complexity 1 22 0 618 217 33 0 chr17 73834826 73834978 -11603502 + MER69 DNA AcHobo 2365 2521 -5 29 28 0 0 chr17 73835545 73835581 -11602899 + AT_rich Low_complexity Low_complexity 1 36 0 2489 90 0 0 chr17 73835796 73836106 -11602374 + AluSq SINE Alu 1 310 -3 216 0 0 0 chr17 73836185 73836209 -11602271 + (CA)n Simple_repeat Simple_repeat 1 24 0 255 173 0 0 chr17 73836403 73836455 -11602025 + CT-rich Low_complexity Low_complexity 3 54 0 191 397 50 0 chr17 73837007 73837148 -11601332 - MIR SINE MIR -48 214 67 423 304 68 21 chr17 73837177 73837368 -11601112 + MIR SINE MIR 14 213 -49 1716 164 0 8 chr17 73837486 73837749 -11600731 + AluJo SINE Alu 3 263 -49 22 35 0 0 chr17 73839233 73839262 -11599218 + AT_rich Low_complexity Low_complexity 1 29 0 205 231 143 75 chr17 73839501 73839648 -11598832 + L2 LINE L2 2623 2779 -535 2707 88 10 15 chr17 73839804 73840213 -11598267 + L1PA13 LINE L1 5757 6163 0 278 79 0 0 chr17 73841186 73841224 -11597256 - MADE1 DNA Mariner -40 40 3 201 162 0 0 chr17 73841329 73841366 -11597114 + T-rich Low_complexity Low_complexity 1 37 0 412 285 90 29 chr17 73841619 73841931 -11596549 - L1ME4a LINE L1 -279 5842 5512 2298 111 0 0 chr17 73842330 73842637 -11595843 - AluSx SINE Alu -5 307 1 25 0 0 0 chr17 73843639 73843664 -11594816 + AT_rich Low_complexity Low_complexity 1 25 0 245 118 20 0 chr17 73843730 73843781 -11594699 + (TA)n Simple_repeat Simple_repeat 1 52 0 1716 150 17 13 chr17 73845611 73845911 -11592569 + AluJb SINE Alu 1 301 -11 26 82 0 0 chr17 73845928 73845989 -11592491 + AT_rich Low_complexity Low_complexity 1 61 0 1959 151 21 24 chr17 73846179 73846517 -11591963 + MER1B DNA MER1_type 1 337 0 308 227 9 24 chr17 73846559 73846671 -11591809 - L1MCa LINE L1 -1339 6983 1995 351 308 115 39 chr17 73847354 73847562 -11590918 - LTR33 LTR ERVL -73 448 225 243 257 59 10 chr17 73847655 73847756 -11590724 - LTR33 LTR ERVL -414 107 2 1993 98 3 63 chr17 73848226 73848543 -11589937 + AluY SINE Alu 1 298 -13 296 44 44 0 chr17 73849441 73849486 -11588994 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1896 103 8 4 chr17 73849497 73849760 -11588720 - AluSg SINE Alu -46 264 1 300 27 0 0 chr17 73851016 73851053 -11587427 + (CA)n Simple_repeat Simple_repeat 1 37 0 3980 276 42 36 chr17 73851058 73852317 -11586163 - MSTC-int LTR MaLR -319 1416 151 397 282 0 9 chr17 73852316 73852426 -11586054 - MSTC-int LTR MaLR -1258 113 5 * 2292 157 81 0 chr17 73852431 73852827 -11585653 - MSTC LTR MaLR 0 428 1 437 326 137 67 chr17 73853431 73853654 -11584826 + L2 LINE L2 2851 3057 -256 201 39 0 0 chr17 73853654 73853680 -11584800 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2354 39 0 11 chr17 73853682 73853966 -11584514 - AluY SINE Alu -30 281 1 437 326 137 67 chr17 73853966 73854156 -11584324 + L2 LINE L2 3057 3296 -17 21 0 0 0 chr17 73854776 73854797 -11583683 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 73855961 73855983 -11582497 + AT_rich Low_complexity Low_complexity 1 22 0 404 49 262 0 chr17 73856326 73856387 -11582093 + MADE1 DNA Mariner 1 77 -3 233 294 15 0 chr17 73857164 73857232 -11581248 + MIR SINE MIR 76 144 -64 1043 294 50 17 chr17 73859086 73859504 -11578976 + MER45B DNA AcHobo 7 438 -602 342 306 65 37 chr17 73859672 73859917 -11578563 - L1M4 LINE L1 -1209 4937 4686 280 354 12 6 chr17 73859936 73860097 -11578383 - L1M4 LINE L1 -2017 4129 3968 1992 130 17 0 chr17 73860358 73860650 -11577830 + AluSg SINE Alu 1 297 -13 1493 142 23 0 chr17 73862004 73862264 -11576216 + L1PA13 LINE L1 5896 6161 -2 2014 91 0 26 chr17 73862273 73862580 -11575900 - AluY SINE Alu -12 299 1 386 130 76 33 chr17 73863713 73863805 -11574675 + LTR18B LTR ERVL 517 612 -2 1528 209 75 18 chr17 73863852 73864250 -11574230 + MLT1D LTR MaLR 72 492 -13 237 338 39 0 chr17 73864794 73864871 -11573609 - HAL1 LINE L1 -2412 95 16 316 290 0 0 chr17 73865314 73865383 -11573097 + HAL1 LINE L1 13 81 -2426 1663 195 75 18 chr17 73865934 73866334 -11572146 - MLT1D LTR MaLR -11 494 72 703 127 83 38 chr17 73866381 73866538 -11571942 - LTR18B LTR ERVL -2 612 449 815 80 213 0 chr17 73866638 73866788 -11571692 - MSTA LTR MaLR -245 183 2 1521 225 82 37 chr17 73867153 73867641 -11570839 - MER67D LTR ERV1 -4 510 1 347 255 159 35 chr17 73868014 73868159 -11570321 - LTR50 LTR ERVL -629 166 4 244 315 28 12 chr17 73868863 73868948 -11569532 - MER5A DNA MER1_type 0 189 91 298 277 17 34 chr17 73869159 73869278 -11569202 - MLT1J2 LTR MaLR -1 449 333 252 59 0 0 chr17 73869341 73869375 -11569105 + (CA)n Simple_repeat Simple_repeat 1 34 0 244 263 46 4 chr17 73869461 73869568 -11568912 - MLT1J2 LTR MaLR -315 131 18 2746 96 5 0 chr17 73869568 73869954 -11568526 + L1P LINE L1 49 436 -5710 403 49 262 0 chr17 73920092 73920153 -11518327 + MADE1 DNA Mariner 1 77 -3 231 294 15 0 chr17 73920930 73920998 -11517482 + MIR SINE MIR 76 144 -64 1636 203 0 3 chr17 73922210 73922510 -11515970 - AluJb SINE Alu -13 299 1 22 35 0 0 chr17 73922877 73922906 -11515574 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr17 73925085 73925117 -11513363 + AT_rich Low_complexity Low_complexity 1 32 0 346 253 110 33 chr17 73925117 73925299 -11513181 - L1ME4a LINE L1 -2 6119 5924 384 310 30 39 chr17 73925324 73925527 -11512953 - L1ME4a LINE L1 -153 5968 5768 260 250 48 12 chr17 73926612 73926696 -11511784 + (TATATG)n Simple_repeat Simple_repeat 3 89 0 343 0 0 0 chr17 73927722 73927760 -11510720 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2325 53 0 3 chr17 73927760 73928043 -11510437 - AluY SINE Alu -29 282 1 986 171 26 66 chr17 73928091 73928319 -11510161 + MER20 DNA MER1_type 1 219 0 282 266 13 0 chr17 73929767 73929846 -11508634 + (TTCA)n Simple_repeat Simple_repeat 3 82 0 230 263 42 8 chr17 73930034 73930152 -11508328 + (TA)n Simple_repeat Simple_repeat 1 122 0 195 42 0 0 chr17 73930769 73930793 -11507687 + (CATG)n Simple_repeat Simple_repeat 3 26 0 189 159 23 23 chr17 73931668 73931712 -11506768 + L2 LINE L2 3268 3311 -2 189 0 0 0 chr17 73933450 73933471 -11505009 + (A)n Simple_repeat Simple_repeat 1 21 0 245 299 110 18 chr17 73934297 73934461 -11504019 - MIR SINE MIR 0 262 84 1028 230 19 0 chr17 73935020 73935233 -11503247 + MER58A DNA MER1_type 6 222 -2 1854 280 96 46 chr17 73936090 73936990 -11501490 + L1M2b LINE L1 1 945 -6264 1142 231 25 21 chr17 73937042 73937367 -11501113 + L1M2b LINE L1 1698 2023 -5186 * 5435 146 29 28 chr17 73937354 73938390 -11500090 + L1MA5 LINE L1 5264 6300 0 643 315 68 26 chr17 73939571 73939873 -11498607 + LTR33 LTR ERVL 47 370 -151 3239 88 25 5 chr17 73939873 73940316 -11498164 - MLT2A2 LTR ERVL 0 453 2 643 315 68 26 chr17 73940316 73940397 -11498083 + LTR33 LTR ERVL 370 446 -75 1105 230 45 9 chr17 73940405 73940681 -11497799 - MLT1A1 LTR MaLR -2 363 88 2001 142 0 0 chr17 73940842 73941151 -11497329 + AluSx SINE Alu 1 309 0 289 214 100 0 chr17 73943414 73943484 -11494996 + HAL1 LINE L1 32 108 -2399 655 237 43 55 chr17 73943485 73943686 -11494794 + MLT1F LTR MaLR 5 212 -355 23 68 0 0 chr17 73943832 73943876 -11494604 + AT_rich Low_complexity Low_complexity 1 44 0 269 353 7 7 chr17 73945736 73945872 -11492608 + (TGG)n Simple_repeat Simple_repeat 2 137 0 334 303 0 45 chr17 73945943 73946121 -11492359 + (TGG)n Simple_repeat Simple_repeat 2 171 0 330 91 0 0 chr17 73946195 73946250 -11492230 + (TA)n Simple_repeat Simple_repeat 1 55 0 288 77 0 0 chr17 73946249 73946288 -11492192 + (CA)n Simple_repeat Simple_repeat 2 40 0 * 1304 230 157 38 chr17 73946292 73946854 -11491626 - MLT1E2 LTR MaLR -5 621 9 1334 285 50 27 chr17 73947555 73948117 -11490363 - MER90 LTR ERV1 0 575 1 183 80 0 0 chr17 73948252 73948277 -11490203 + (ATG)n Simple_repeat Simple_repeat 3 27 0 202 274 310 0 chr17 73948358 73948471 -11490009 - MIR SINE MIR -19 243 96 1278 244 48 30 chr17 73948527 73948863 -11489617 - MER21B LTR ERV1 -107 756 415 2142 183 95 35 chr17 73948876 73949232 -11489248 + LTR32 LTR ERVL 15 403 -68 1965 122 52 0 chr17 73949232 73949519 -11488961 - AluSx SINE Alu -10 302 1 2142 183 95 35 chr17 73949519 73949593 -11488887 + LTR32 LTR ERVL 403 471 0 1138 261 76 33 chr17 73949597 73949965 -11488515 - MER21B LTR ERV1 -461 402 19 278 173 58 0 chr17 73949991 73950043 -11488437 - MER21B LTR ERV1 -777 86 32 531 114 0 57 chr17 73950047 73950205 -11488275 + (TC)n Simple_repeat Simple_repeat 2 150 0 453 237 229 0 chr17 73950579 73950697 -11487783 - MER5A DNA MER1_type 0 189 45 26 0 0 0 chr17 73951043 73951069 -11487411 + AT_rich Low_complexity Low_complexity 1 26 0 664 220 81 12 chr17 73952356 73952529 -11485951 + MER5A DNA MER1_type 2 186 -3 450 144 40 12 chr17 73953158 73953331 -11485149 + (TA)n Simple_repeat Simple_repeat 1 178 0 243 183 17 0 chr17 73953392 73953452 -11485028 + L1MC4 LINE L1 6640 6700 -1342 1662 160 14 99 chr17 73953566 73953992 -11484488 + MER57A LTR ERV1 1 390 -13 2165 175 68 52 chr17 73954051 73954547 -11483933 - MLT1D LTR MaLR -1 504 1 23 0 0 0 chr17 73955085 73955108 -11483372 + AT_rich Low_complexity Low_complexity 1 23 0 4322 51 0 0 chr17 73956564 73957094 -11481386 + L1PA6 LINE L1 5625 6154 0 180 152 0 0 chr17 73957807 73957840 -11480640 + T-rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr17 73958063 73958084 -11480396 + AT_rich Low_complexity Low_complexity 1 21 0 216 97 0 0 chr17 73958788 73958819 -11479661 + (TA)n Simple_repeat Simple_repeat 1 31 0 2028 241 75 7 chr17 73959378 73960137 -11478343 - L1MCc LINE L1 -3164 3777 2967 729 241 58 73 chr17 73960151 73960639 -11477841 - L1MCc LINE L1 -4889 1534 1364 231 88 0 0 chr17 73960639 73960673 -11477807 + (TG)n Simple_repeat Simple_repeat 2 35 0 729 241 58 73 chr17 73960673 73960884 -11477596 - L1MCc LINE L1 -5059 1364 1151 773 231 4 97 chr17 73960888 73961126 -11477354 - MER20 DNA MER1_type 0 219 4 340 330 56 69 chr17 73961275 73961508 -11476972 - L1MCc LINE L1 -5493 930 701 2273 109 14 0 chr17 73961681 73962014 -11476466 + L1PA10 LINE L1 5754 6094 -74 398 145 0 12 chr17 73962022 73962105 -11476375 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 21 57 0 0 chr17 73962118 73962153 -11476327 + AT_rich Low_complexity Low_complexity 1 35 0 685 344 75 20 chr17 73962551 73962900 -11475580 - HERVL LTR ERVL -1207 4447 4080 1697 194 27 16 chr17 73964991 73965362 -11473118 - THE1C LTR MaLR 0 375 1 231 157 20 20 chr17 73965787 73965838 -11472642 + MLT1K LTR MaLR 194 244 -344 1105 200 50 148 chr17 73965926 73966385 -11472095 - MLT2B1 LTR ERVL 0 414 1 234 311 59 34 chr17 73966707 73966826 -11471654 + MIR SINE MIR 15 136 -126 281 312 32 0 chr17 73966827 73966920 -11471560 - L2 LINE L2 0 3272 3177 207 179 0 0 chr17 73967771 73967810 -11470670 + T-rich Low_complexity Low_complexity 2 40 0 2093 146 0 0 chr17 73967812 73968120 -11470360 - AluJo SINE Alu -4 308 1 243 224 0 0 chr17 73968899 73968975 -11469505 + (TA)n Simple_repeat Simple_repeat 1 76 0 1965 138 0 0 chr17 73968975 73969257 -11469223 - AluSg SINE Alu -26 284 3 22 0 0 0 chr17 73969261 73969283 -11469197 + AT_rich Low_complexity Low_complexity 1 22 0 264 294 123 20 chr17 73969335 73969481 -11468999 - HAL1 LINE L1 -208 2299 2139 236 299 161 23 chr17 73969754 73969971 -11468509 - HAL1 LINE L1 -963 1544 1298 183 80 0 0 chr17 73969971 73969996 -11468484 + (TTA)n Simple_repeat Simple_repeat 2 26 0 311 275 33 0 chr17 73970012 73970103 -11468377 - HAL1 LINE L1 -1287 1220 1127 625 384 9 18 chr17 73970117 73970445 -11468035 + L2 LINE L2 2580 2904 -410 1929 128 14 3 chr17 73970563 73970880 -11467600 + AluSx SINE Alu 1 320 0 1420 183 0 60 chr17 73970984 73971350 -11467130 + L1MA8 LINE L1 5946 6289 -2 2070 132 10 0 chr17 73971523 73971826 -11466654 + AluSx SINE Alu 1 306 -6 1992 151 73 14 chr17 73973868 73974212 -11464268 + THE1B LTR MaLR 1 364 0 382 66 0 2 chr17 73974899 73974957 -11463523 - MLT2A1 LTR ERVL 0 444 393 627 99 66 0 chr17 73974957 73975298 -11463182 + (TA)n Simple_repeat Simple_repeat 1 363 0 654 128 49 0 chr17 73975319 73975750 -11462730 + (TA)n Simple_repeat Simple_repeat 1 451 0 3066 86 0 5 chr17 73975770 73976176 -11462304 - MLT2A1 LTR ERVL -40 404 1 18280 70 23 3 chr17 73976176 73978535 -11459945 - HERVL-A1 LTR ERVL 0 5654 3249 15185 59 1 1 chr17 73978536 73980392 -11458088 - HERVL-A1 LTR ERVL -3797 1857 1 2996 77 12 93 chr17 73980392 73980875 -11457605 - MLT2A1 LTR ERVL 0 444 1 24 53 0 0 chr17 73980895 73980933 -11457547 + AT_rich Low_complexity Low_complexity 1 38 0 22 56 0 0 chr17 73981183 73981219 -11457261 + AT_rich Low_complexity Low_complexity 1 36 0 230 426 0 0 chr17 73981539 73981647 -11456833 + MIR SINE MIR 19 126 -136 767 241 53 10 chr17 73981773 73981980 -11456500 + MER58A DNA MER1_type 4 219 -5 189 107 0 0 chr17 73982185 73982213 -11456267 + (TTCTC)n Simple_repeat Simple_repeat 3 30 0 189 74 0 0 chr17 73982585 73982612 -11455868 + (GA)n Simple_repeat Simple_repeat 2 28 0 13962 29 0 43 chr17 73983157 73985735 -11452745 - L1PA4 LINE L1 0 6155 3659 24 32 0 0 chr17 73985766 73985797 -11452683 + AT_rich Low_complexity Low_complexity 1 31 0 311 339 0 18 chr17 73986572 73986681 -11451799 - L2 LINE L2 -26 3246 3140 202 325 17 92 chr17 73986719 73986839 -11451641 - L2 LINE L2 -236 3036 2926 198 371 54 48 chr17 73988947 73989133 -11449347 + L2 LINE L2 2690 2876 -438 191 264 178 54 chr17 73989317 73989446 -11449034 + MIR SINE MIR 47 191 -71 372 230 74 7 chr17 73990054 73990189 -11448291 - L1MC5 LINE L1 -811 7150 7007 23 0 0 0 chr17 73990203 73990226 -11448254 + AT_rich Low_complexity Low_complexity 1 23 0 2144 117 3 16 chr17 73990320 73990629 -11447851 - AluSq SINE Alu -8 305 1 351 320 79 5 chr17 73990798 73991001 -11447479 - L1ME LINE L1 -379 5742 5525 22 35 0 0 chr17 73991196 73991225 -11447255 + AT_rich Low_complexity Low_complexity 1 29 0 268 159 23 0 chr17 73992127 73992171 -11446309 - MIR SINE MIR -143 65 21 249 326 121 33 chr17 73992273 73992488 -11445992 + L2 LINE L2 2983 3216 -56 2460 88 0 0 chr17 73992728 73993036 -11445444 - AluSc SINE Alu -1 308 1 288 0 0 0 chr17 73993121 73993153 -11445327 + (CA)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr17 73993152 73993181 -11445299 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 225 94 0 0 chr17 73993182 73993214 -11445266 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 2569 158 21 9 chr17 73993237 73993666 -11444814 + Tigger2a DNA MER2_type 1 434 0 225 258 0 0 chr17 73993724 73993790 -11444690 + (TATATG)n Simple_repeat Simple_repeat 1 66 0 237 133 0 50 chr17 73993790 73993850 -11444630 - L1MCa LINE L1 -4362 2064 2008 432 234 45 27 chr17 73994338 73994449 -11444031 + L2 LINE L2 3194 3306 -7 180 179 0 0 chr17 73995219 73995258 -11443222 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 22 56 0 0 chr17 73995657 73995693 -11442787 + AT_rich Low_complexity Low_complexity 1 36 0 1928 212 52 64 chr17 73995803 73996364 -11442116 + MLT2B3 LTR ERVL 1 554 0 1824 149 71 31 chr17 73996769 73997119 -11441361 - THE1B LTR MaLR 0 364 1 583 344 76 31 chr17 73997313 73997828 -11440652 - L2 LINE L2 -5 3308 2778 2253 102 0 0 chr17 73999656 73999941 -11438539 - AluSq SINE Alu -28 285 1 833 275 233 24 chr17 74000001 74000659 -11437821 + LTR50 LTR ERVL 1 795 0 262 280 56 37 chr17 74000846 74000953 -11437527 - HERV16 LTR ERVL -2078 2918 2810 2451 170 22 2 chr17 74000973 74001390 -11437090 - MSTB LTR MaLR -1 425 1 432 245 8 9 chr17 74001426 74001600 -11436880 + L1MDb LINE L1 1336 1512 -5031 272 237 139 57 chr17 74001731 74001925 -11436555 + L1MDb LINE L1 875 1084 -5325 6848 42 2 0 chr17 74001926 74002779 -11435701 - L1P LINE L1 -3408 2738 1884 1100 241 83 55 chr17 74002763 74003368 -11435112 + L1MDb LINE L1 1066 1682 -4724 * 2243 141 30 28 chr17 74005086 74005449 -11433031 - THE1B LTR MaLR 0 364 1 251 209 0 0 chr17 74005575 74005618 -11432862 + LTR33 LTR ERVL 104 146 -375 181 380 37 19 chr17 74007184 74007284 -11431196 + L2 LINE L2 3200 3304 -9 2037 129 3 0 chr17 74007284 74007570 -11430910 - AluSg SINE Alu -23 287 1 28 29 0 0 chr17 74007607 74007642 -11430838 + AT_rich Low_complexity Low_complexity 1 35 0 29 47 0 0 chr17 74007932 74007975 -11430505 + AT_rich Low_complexity Low_complexity 1 43 0 486 239 0 9 chr17 74007976 74008089 -11430391 + L1PB4 LINE L1 6045 6156 0 2482 75 3 0 chr17 74008202 74008507 -11429973 - AluY SINE Alu -5 306 1 274 243 14 0 chr17 74008947 74009021 -11429459 - MER116 DNA Mariner -5 75 1 23 0 0 0 chr17 74010265 74010288 -11428192 + AT_rich Low_complexity Low_complexity 1 23 0 206 364 70 14 chr17 74011112 74011255 -11427225 + MER5B DNA MER1_type 25 175 -3 188 83 0 28 chr17 74012861 74012897 -11425583 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 444 195 0 0 chr17 74013726 74013803 -11424677 + AluJo SINE Alu 1 77 -235 1259 167 0 0 chr17 74013805 74014020 -11424460 - AluSg/x SINE Alu -10 300 86 1505 138 0 9 chr17 74014020 74014244 -11424236 + AluJo SINE Alu 66 287 -25 22 0 0 0 chr17 74014244 74014266 -11424214 + AT_rich Low_complexity Low_complexity 1 22 0 258 261 23 0 chr17 74015151 74015239 -11423241 - L1MC4 LINE L1 -1339 6703 6614 317 322 0 0 chr17 74015259 74015349 -11423131 + L1MC4 LINE L1 6614 6703 -1339 329 311 0 0 chr17 74015355 74015445 -11423035 + L1MC4 LINE L1 6614 6703 -1339 311 326 0 0 chr17 74015402 74015491 -11422989 - L1MC4 LINE L1 -1340 6702 6614 * 323 315 0 0 chr17 74015520 74015609 -11422871 + L1MC4 LINE L1 6615 6703 -1339 323 315 0 0 chr17 74015642 74015731 -11422749 + L1MC4 LINE L1 6615 6703 -1339 390 184 0 0 chr17 74015734 74015810 -11422670 + (TA)n Simple_repeat Simple_repeat 1 76 0 339 300 0 0 chr17 74015811 74015901 -11422579 + L1MC4 LINE L1 6614 6703 -1339 212 189 38 0 chr17 74015902 74015955 -11422525 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 230 250 71 0 chr17 74015959 74016043 -11422437 + L1MC4 LINE L1 6614 6703 -1339 2033 112 28 3 chr17 74016080 74016367 -11422113 - AluSg1 SINE Alu -15 294 1 434 338 101 15 chr17 74016684 74016882 -11421598 + MIR SINE MIR 2 216 -46 224 286 0 0 chr17 74016936 74016992 -11421488 - MIR SINE MIR -58 150 95 1700 155 60 41 chr17 74016995 74017363 -11421117 - THE1C LTR MaLR 0 375 1 9105 126 48 38 chr17 74017372 74018917 -11419563 + THE1C-int LTR MaLR 21 1580 0 1570 165 57 49 chr17 74018919 74019289 -11419191 + THE1C LTR MaLR 3 375 0 267 288 0 0 chr17 74019380 74019439 -11419041 - L2 LINE L2 -3 3269 3211 189 0 0 0 chr17 74020341 74020362 -11418118 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 236 266 0 0 chr17 74021509 74021573 -11416907 + L3b LINE CR1 1102 1165 -418 2390 71 13 10 chr17 74021724 74022032 -11416448 + AluY SINE Alu 1 309 -2 21 0 0 0 chr17 74022381 74022402 -11416078 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr17 74023885 74023940 -11414540 + AT_rich Low_complexity Low_complexity 1 55 0 383 182 23 8 chr17 74026016 74026148 -11412332 + (TA)n Simple_repeat Simple_repeat 1 134 0 236 308 0 19 chr17 74027239 74027291 -11411189 + L2 LINE L2 3132 3182 -90 21 57 0 0 chr17 74027639 74027674 -11410806 + AT_rich Low_complexity Low_complexity 1 35 0 434 322 90 24 chr17 74027691 74028104 -11410376 - L1ME4a LINE L1 -105 6016 5577 210 71 0 0 chr17 74028852 74028880 -11409600 + (A)n Simple_repeat Simple_repeat 1 28 0 21 36 0 0 chr17 74028937 74028965 -11409515 + AT_rich Low_complexity Low_complexity 1 28 0 291 312 91 63 chr17 74029662 74029947 -11408533 - L2 LINE L2 -94 3219 2927 335 209 0 11 chr17 74029958 74030049 -11408431 + T-rich Low_complexity Low_complexity 5 94 0 2315 90 0 10 chr17 74030214 74030513 -11407967 - AluSg SINE Alu -14 296 1 264 314 81 8 chr17 74030574 74030698 -11407782 - MLT1J LTR MaLR -2 509 377 1919 153 3 10 chr17 74030898 74031199 -11407281 + AluJo SINE Alu 1 299 -13 376 276 105 29 chr17 74031214 74031424 -11407056 + MLT1L LTR MaLR 371 596 -19 2114 118 3 3 chr17 74031568 74031864 -11406616 - AluSx SINE Alu -16 296 1 283 351 99 14 chr17 74032088 74032299 -11406181 + MIR SINE MIR 1 229 -33 * 894 279 4 13 chr17 74032271 74032497 -11405983 - MIR SINE MIR -16 246 23 1358 83 18 0 chr17 74033970 74034139 -11404341 - AluSc SINE Alu -45 264 93 688 276 88 74 chr17 74034417 74034779 -11403701 - L1MEc LINE L1 -4722 1539 1167 456 202 0 0 chr17 74034779 74034873 -11403607 + L1PB4 LINE L1 6060 6153 -3 688 276 88 74 chr17 74034873 74035010 -11403470 - L1MEc LINE L1 -5094 1167 1033 383 228 57 46 chr17 74035029 74035292 -11403188 - L1MEc LINE L1 -5070 1000 735 697 243 33 19 chr17 74035832 74036042 -11402438 + MER58C DNA MER1_type 1 213 -2 230 281 81 38 chr17 74036070 74036280 -11402200 - HAL1 LINE L1 -1246 1261 1043 288 191 117 32 chr17 74036339 74036433 -11402047 + MLT1H LTR MaLR 445 546 -3 792 327 63 47 chr17 74036441 74037043 -11401437 - HAL1 LINE L1 -1886 621 10 702 237 107 23 chr17 74038323 74038538 -11399942 - MIR SINE MIR 0 262 30 21 0 0 0 chr17 74038720 74038741 -11399739 + AT_rich Low_complexity Low_complexity 1 21 0 329 344 153 0 chr17 74039043 74039200 -11399280 + MER5A DNA MER1_type 9 189 0 643 231 0 0 chr17 74039871 74040001 -11398479 + FLAM_C SINE Alu 3 132 -1 1044 107 0 0 chr17 74040437 74040587 -11397893 - AluSg/x SINE Alu 0 312 163 34 72 0 0 chr17 74041928 74041997 -11396483 + AT_rich Low_complexity Low_complexity 1 69 0 511 272 132 34 chr17 74042221 74042638 -11395842 - L1MC4a LINE L1 -312 5809 5492 1998 118 29 16 chr17 74044439 74044745 -11393735 + AluY SINE Alu 2 311 0 21 36 0 0 chr17 74045847 74045875 -11392605 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr17 74045905 74045937 -11392543 + AT_rich Low_complexity Low_complexity 1 32 0 239 79 26 0 chr17 74046168 74046206 -11392274 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 593 196 0 0 chr17 74046309 74046411 -11392069 + AluJ/FLAM SINE Alu 1 102 -210 322 337 30 10 chr17 74048069 74048170 -11390310 + L2 LINE L2 3169 3271 -1 22 0 0 0 chr17 74048690 74048712 -11389768 + AT_rich Low_complexity Low_complexity 1 22 0 3230 131 50 4 chr17 74050791 74051295 -11387185 - MER1A DNA MER1_type 0 527 1 195 100 0 0 chr17 74051423 74051453 -11387027 + (TAA)n Simple_repeat Simple_repeat 3 32 0 710 239 53 69 chr17 74051454 74051680 -11386800 - MIR SINE MIR -15 247 24 2104 111 0 7 chr17 74051680 74051978 -11386502 + AluSg SINE Alu 1 296 -14 710 239 53 69 chr17 74051978 74051998 -11386482 - MIR SINE MIR -238 24 5 475 214 8 48 chr17 74052352 74052478 -11386002 + MLT1H LTR MaLR 41 161 -388 813 269 101 43 chr17 74052523 74052628 -11385852 + MLT1H LTR MaLR 117 214 -335 216 0 0 0 chr17 74052628 74052652 -11385828 + (TC)n Simple_repeat Simple_repeat 2 25 0 813 269 101 43 chr17 74052652 74052943 -11385537 + MLT1H LTR MaLR 214 536 -13 249 33 0 0 chr17 74054031 74054061 -11384419 + (TG)n Simple_repeat Simple_repeat 1 30 0 1714 184 3 10 chr17 74055630 74055934 -11382546 + AluJb SINE Alu 9 310 -2 5557 164 30 31 chr17 74055938 74057281 -11381199 + L1MC1 LINE L1 4987 6333 0 723 316 117 34 chr17 74057373 74057842 -11380638 + MLT1H LTR MaLR 42 549 0 26 0 0 0 chr17 74058141 74058167 -11380313 + AT_rich Low_complexity Low_complexity 1 26 0 226 267 69 60 chr17 74058833 74058949 -11379531 + MLT1H-int LTR MaLR 1227 1343 -28 679 307 108 38 chr17 74059043 74059467 -11379013 + MLT1H LTR MaLR 84 537 -12 2301 110 0 0 chr17 74060412 74060722 -11377758 - AluY SINE Alu -1 310 1 184 111 0 0 chr17 74060749 74060776 -11377704 - L2 LINE L2 -36 3236 3210 1511 80 18 5 chr17 74060789 74061013 -11377467 - L1PB1 LINE L1 -1 6150 5924 2357 139 9 16 chr17 74061015 74061433 -11377047 + L1PB1 LINE L1 5380 5827 -324 1798 109 0 4 chr17 74061437 74061675 -11376805 + AluSq SINE Alu 1 237 -76 21 0 0 0 chr17 74061967 74061988 -11376492 + AT_rich Low_complexity Low_complexity 1 21 0 789 102 0 2 chr17 74062224 74062324 -11376156 - L1PB1 LINE L1 -233 5918 5816 1605 84 4 27 chr17 74062324 74062549 -11375931 - AluSq SINE Alu 0 313 94 789 102 0 2 chr17 74062549 74062564 -11375916 - L1PB1 LINE L1 -335 5816 5802 236 328 29 47 chr17 74064764 74064935 -11373545 + L3 LINE CR1 1191 1358 -219 5496 168 30 43 chr17 74065142 74065808 -11372672 + L1MC1 LINE L1 4943 5616 -717 1689 182 0 7 chr17 74065808 74066088 -11372392 - AluJb SINE Alu -34 278 1 5496 168 30 43 chr17 74066088 74066834 -11371646 + L1MC1 LINE L1 5616 6333 0 199 379 11 11 chr17 74066921 74067008 -11371472 - L2 LINE L2 -212 3060 2974 3270 193 79 36 chr17 74067139 74067399 -11371081 + L1MB1 LINE L1 4967 5214 -954 2449 69 3 3 chr17 74067399 74067704 -11370776 + AluY SINE Alu 1 305 -6 3270 193 79 36 chr17 74067704 74068555 -11369925 + L1MB1 LINE L1 5214 6124 -44 2143 118 0 0 chr17 74068555 74068844 -11369636 + AluSc SINE Alu 4 292 -17 3270 193 79 36 chr17 74068844 74068877 -11369603 + L1MB1 LINE L1 6124 6154 -14 807 113 0 0 chr17 74069263 74069369 -11369111 - MER30B DNA MER1_type 0 230 125 202 70 14 99 chr17 74069371 74069442 -11369038 + (TA)n Simple_repeat Simple_repeat 2 66 0 180 0 0 0 chr17 74069457 74069477 -11369003 + (TG)n Simple_repeat Simple_repeat 1 20 0 304 234 0 0 chr17 74069477 74069541 -11368939 - L1MC4 LINE L1 -1340 6702 6639 787 52 0 0 chr17 74069542 74069638 -11368842 - MER30B DNA MER1_type -94 96 1 306 173 111 12 chr17 74070170 74070251 -11368229 + MER53 DNA DNA 94 182 -7 * 436 88 73 0 chr17 74070194 74070262 -11368218 - MER53 DNA DNA -111 78 6 261 280 43 21 chr17 74070448 74070541 -11367939 + L2 LINE L2 3176 3270 -2 2457 122 8 3 chr17 74071113 74071475 -11367005 - THE1B LTR MaLR 0 364 1 465 261 87 109 chr17 74072580 74072859 -11365621 + MLT1J1 LTR MaLR 63 347 -99 2438 114 55 36 chr17 74072859 74073279 -11365201 + MSTA LTR MaLR 1 428 0 9017 177 15 6 chr17 74073279 74074916 -11363564 + MSTA-int LTR MaLR 1 1651 0 2466 148 24 5 chr17 74074916 74075336 -11363144 + MSTA LTR MaLR 1 428 0 465 261 87 109 chr17 74075336 74075376 -11363104 + MLT1J1 LTR MaLR 344 377 -69 528 352 101 40 chr17 74075420 74076170 -11362310 + L2 LINE L2 2481 3277 -36 320 51 0 0 chr17 74076186 74076225 -11362255 - MLT2B3 LTR ERVL 0 554 516 917 201 5 31 chr17 74076226 74076420 -11362060 + MST-int LTR MaLR 655 843 -808 1973 189 47 74 chr17 74076443 74076957 -11361523 - MLT2B3 LTR ERVL -54 500 1 38 68 0 0 chr17 74077460 74077533 -11360947 + AT_rich Low_complexity Low_complexity 1 73 0 1985 128 28 0 chr17 74077755 74078045 -11360435 - AluSx SINE Alu -14 298 1 180 0 0 0 chr17 74078102 74078122 -11360358 + (TG)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr17 74078859 74078881 -11359599 + AT_rich Low_complexity Low_complexity 1 22 0 273 257 10 10 chr17 74079186 74079269 -11359211 - MIR3 SINE MIR -21 187 102 1743 171 24 0 chr17 74079792 74080085 -11358395 + AluJo SINE Alu 1 300 -12 205 324 28 28 chr17 74080115 74080186 -11358294 - MIR SINE MIR -190 72 2 1111 41 41 12 chr17 74080920 74080928 -11357552 + (TTTC)n Simple_repeat Simple_repeat 1 185 0 1111 41 41 12 chr17 74080928 74081100 -11357380 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 237 410 87 6 chr17 74081979 74082152 -11356328 + L2 LINE L2 3073 3259 -13 310 206 16 0 chr17 74082445 74082508 -11355972 - MIR SINE MIR -25 237 174 183 69 0 0 chr17 74082540 74082569 -11355911 + MIR SINE MIR 171 199 -63 1999 113 3 55 chr17 74082949 74083278 -11355202 + AluSx SINE Alu 1 312 0 336 311 73 20 chr17 74085088 74085239 -11353241 + L3 LINE CR1 911 1069 -508 360 0 0 0 chr17 74085283 74085323 -11353157 + (GA)n Simple_repeat Simple_repeat 2 41 0 1835 151 6 28 chr17 74085460 74085778 -11352702 - AluJo SINE Alu -1 311 1 641 179 24 0 chr17 74086043 74086166 -11352314 + L1PB4 LINE L1 6028 6153 -3 2090 136 0 0 chr17 74086628 74086922 -11351558 - AluSx SINE Alu -18 294 1 758 65 0 0 chr17 74087394 74087486 -11350994 - AluSg SINE Alu -180 130 39 1044 110 0 0 chr17 74087486 74087631 -11350849 + AluSg/x SINE Alu 160 304 -8 474 335 70 10 chr17 74089014 74089214 -11349266 - MIR SINE MIR 0 262 51 207 69 0 0 chr17 74089645 74089674 -11348806 + (TG)n Simple_repeat Simple_repeat 1 29 0 806 251 11 0 chr17 74089934 74090121 -11348359 - MER5A DNA MER1_type 0 189 1 1694 138 21 35 chr17 74090314 74090604 -11347876 + AluJb SINE Alu 1 286 -26 705 279 18 14 chr17 74093513 74093732 -11344748 + MER58A DNA MER1_type 4 223 -1 762 269 24 40 chr17 74093769 74094018 -11344462 + MIR SINE MIR 6 250 -12 180 111 0 0 chr17 74095155 74095182 -11343298 + (TG)n Simple_repeat Simple_repeat 1 27 0 279 221 137 44 chr17 74096275 74096392 -11342088 + MIR SINE MIR 40 166 -58 1401 198 14 62 chr17 74096613 74096971 -11341509 - MER58B DNA MER1_type 0 341 1 213 152 22 0 chr17 74097712 74097758 -11340722 + (TTTG)n Simple_repeat Simple_repeat 1 47 0 245 330 10 40 chr17 74099303 74099403 -11339077 + MIR SINE MIR 59 141 -67 524 322 44 0 chr17 74099563 74099746 -11338734 - MIR SINE MIR -6 256 66 369 0 0 0 chr17 74100026 74100067 -11338413 + (TG)n Simple_repeat Simple_repeat 2 42 0 250 409 0 18 chr17 74100162 74100272 -11338208 - L2 LINE L2 -31 3241 3134 551 231 95 101 chr17 74100610 74101014 -11337466 - MLT1A1 LTR MaLR -1 395 1 23 33 0 0 chr17 74102303 74102333 -11336147 + AT_rich Low_complexity Low_complexity 1 30 0 233 220 17 0 chr17 74103390 74103449 -11335031 + (CA)n Simple_repeat Simple_repeat 1 60 0 28 48 0 0 chr17 74104153 74104195 -11334285 + AT_rich Low_complexity Low_complexity 1 42 0 4485 221 165 11 chr17 74104276 74105751 -11332729 + L1PB1 LINE L1 728 2429 -5156 * 14897 190 8 24 chr17 74105741 74110588 -11327892 + L1PB1 LINE L1 2828 7588 -1 341 237 41 12 chr17 74110722 74110891 -11327589 + (TA)n Simple_repeat Simple_repeat 1 174 0 22 0 0 0 chr17 74111407 74111429 -11327051 + AT_rich Low_complexity Low_complexity 1 22 0 210 71 0 0 chr17 74111744 74111772 -11326708 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 502 267 90 101 chr17 74112307 74112742 -11325738 + Charlie7 DNA MER1_type 1 430 -2182 287 285 98 79 chr17 74112742 74112877 -11325603 + MIR SINE MIR 44 186 -76 2163 147 31 0 chr17 74112877 74113230 -11325250 + THE1B LTR MaLR 1 364 0 287 285 98 79 chr17 74113230 74113308 -11325172 + MIR SINE MIR 186 261 -1 257 167 21 0 chr17 74113413 74113461 -11325019 - MLT2D LTR ERVL 0 464 416 1864 162 54 14 chr17 74113510 74113862 -11324618 - MLT2D LTR ERVL -48 366 1 335 294 37 68 chr17 74113932 74114095 -11324385 - L2 LINE L2 -1 3312 3155 552 155 0 0 chr17 74114096 74114180 -11324300 + FLAM_A SINE Alu 44 127 -15 6377 85 0 21 chr17 74114195 74114960 -11323520 - L1PA12 LINE L1 -10 6158 5402 2209 114 0 7 chr17 74114960 74115258 -11323222 - AluSq SINE Alu -17 296 1 6377 85 0 21 chr17 74115258 74115529 -11322951 - L1PA12 LINE L1 -766 5402 5127 902 296 144 7 chr17 74115657 74116093 -11322387 - L2 LINE L2 -291 3022 2533 1266 192 24 16 chr17 74116147 74116402 -11322078 - MLT2D LTR ERVL -143 271 15 2152 286 97 27 chr17 74116412 74117434 -11321046 - L2 LINE L2 -778 2536 1444 879 162 7 0 chr17 74117471 74117625 -11320855 + L1MA5A LINE L1 6131 6285 -12 21 36 0 0 chr17 74117632 74117660 -11320820 + AT_rich Low_complexity Low_complexity 1 28 0 187 383 26 9 chr17 74118029 74118144 -11320336 - L2 LINE L2 -508 2806 2690 225 216 40 16 chr17 74118184 74118256 -11320224 + GA-rich Low_complexity Low_complexity 2 128 0 185 390 55 22 chr17 74118354 74118536 -11319944 - L2 LINE L2 -903 2411 2224 990 210 18 86 chr17 74118749 74119087 -11319393 + MER58D DNA MER1_type 1 315 -71 1300 216 8 0 chr17 74119346 74119582 -11318898 + Tigger5 DNA MER2_type 1 238 -2085 1264 151 25 50 chr17 74119577 74119738 -11318742 + Tigger5 DNA MER2_type 2090 2245 -78 * 2136 116 10 0 chr17 74119738 74120040 -11318440 + AluSx SINE Alu 1 305 -7 1264 151 25 50 chr17 74120040 74120117 -11318363 + Tigger5 DNA MER2_type 2245 2322 -1 1947 144 38 12 chr17 74120119 74120459 -11318021 - L1MC2 LINE L1 -422 5922 5574 1938 202 28 31 chr17 74120461 74120886 -11317594 + MSTB1 LTR MaLR 3 426 -6 925 160 52 10 chr17 74120886 74121080 -11317400 - L1MC2 LINE L1 -2411 5584 5383 869 180 7 0 chr17 74121568 74121718 -11316762 + MER74C LTR ERVL 148 298 -162 586 283 93 52 chr17 74121729 74122072 -11316408 + L1ME1 LINE L1 3029 3385 -2761 1482 195 17 11 chr17 74122073 74122360 -11316120 + AluJo SINE Alu 1 289 -23 22 35 0 0 chr17 74122360 74122389 -11316091 + AT_rich Low_complexity Low_complexity 1 29 0 2486 194 7 11 chr17 74122437 74122891 -11315589 + MER74C LTR ERVL 9 460 0 3915 227 53 91 chr17 74122896 74123679 -11314801 + L1ME1 LINE L1 3404 4215 -1951 2103 147 0 0 chr17 74123679 74123986 -11314494 + AluSx SINE Alu 2 308 -4 3915 227 53 91 chr17 74123986 74126066 -11312414 + L1ME1 LINE L1 4215 6148 -18 348 250 9 9 chr17 74127316 74127432 -11311048 + (TA)n Simple_repeat Simple_repeat 2 117 0 2423 60 0 3 chr17 74127554 74127852 -11310628 + AluY SINE Alu 15 311 0 420 326 44 31 chr17 74127955 74128182 -11310298 - MIR SINE MIR 0 262 33 408 111 0 0 chr17 74128189 74128252 -11310228 + (TCCCC)n Simple_repeat Simple_repeat 5 67 0 2294 97 0 3 chr17 74128256 74128566 -11309914 - AluSq SINE Alu -4 309 1 287 313 88 28 chr17 74130081 74130263 -11308217 + MIR SINE MIR 70 262 0 195 42 0 0 chr17 74130527 74130551 -11307929 + (CCA)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr17 74130573 74130595 -11307885 + (CA)n Simple_repeat Simple_repeat 2 23 0 810 206 106 20 chr17 74133504 74133703 -11304777 + MER58A DNA MER1_type 9 224 0 785 222 0 25 chr17 74133710 74133908 -11304572 + MER3 DNA MER1_type 9 201 -8 225 194 75 45 chr17 74134528 74134595 -11303885 + ORSL DNA AcHobo 1 69 -206 882 144 27 6 chr17 74134600 74134746 -11303734 + GA-rich Low_complexity Low_complexity 1 143 -590 2195 148 28 3 chr17 74134746 74135098 -11303382 - THE1B LTR MaLR -3 361 1 882 144 27 6 chr17 74135098 74135319 -11303161 + GA-rich Low_complexity Low_complexity 143 733 0 674 182 11 22 chr17 74135332 74135513 -11302967 + GA-rich Low_complexity Low_complexity 2 180 0 590 263 56 39 chr17 74135599 74135831 -11302649 + MIR SINE MIR 27 262 0 239 202 131 19 chr17 74136048 74136159 -11302321 + MER39 LTR ERV1 1 132 -410 3955 162 23 1 chr17 74136207 74136903 -11301577 - MER50 LTR ERV1 -23 711 1 1047 193 98 29 chr17 74136948 74137254 -11301226 + MER39 LTR ERV1 381 707 0 229 0 0 77 chr17 74137498 74137537 -11300943 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 1385 188 7 23 chr17 74138908 74139216 -11299264 - MER58B DNA MER1_type -15 326 24 2044 121 45 0 chr17 74139642 74139931 -11298549 + AluSx SINE Alu 1 302 -10 2140 134 22 27 chr17 74140049 74140415 -11298065 - THE1B LTR MaLR 0 364 1 11370 103 5 2 chr17 74140415 74141991 -11296489 - THE1B-int LTR MaLR 0 1580 1 1902 155 22 30 chr17 74141996 74142357 -11296123 - THE1B LTR MaLR -5 359 2 3857 142 42 9 chr17 74142738 74143426 -11295054 - MER50 LTR ERV1 -23 711 1 202 369 106 19 chr17 74143697 74143857 -11294623 - MIR SINE MIR -81 181 8 227 209 0 0 chr17 74143913 74143956 -11294524 + LTR48B LTR ERV1 4 46 -598 * 1001 201 66 111 chr17 74143951 74144416 -11294064 + MER39 LTR ERV1 67 707 0 3155 157 7 22 chr17 74146118 74146710 -11291770 - MER41B LTR ERV1 0 635 53 1996 139 9 9 chr17 74146730 74147062 -11291418 - L1PB3 LINE L1 -4 6150 5819 1619 199 21 5 chr17 74147063 74147449 -11291031 + L1 LINE L1 4696 5087 -1059 412 147 0 0 chr17 74147460 74147528 -11290952 - MER41B LTR ERV1 -567 68 1 2030 121 0 0 chr17 74147765 74148077 -11290403 + AluSx SINE Alu 1 312 0 201 247 137 82 chr17 74148240 74148386 -11290094 - MIR SINE MIR -72 190 37 2360 106 0 0 chr17 74148569 74148880 -11289600 - AluY SINE Alu 0 311 1 2789 78 11 3 chr17 74149579 74149950 -11288530 + THE1C LTR MaLR 1 374 -1 480 305 17 17 chr17 74151916 74152093 -11286387 - MIR SINE MIR -18 244 68 2386 208 16 29 chr17 74152108 74152667 -11285813 + MER74B LTR ERVL 69 620 -2 663 183 22 14 chr17 74152735 74153014 -11285466 + CT-rich Low_complexity Low_complexity 1 281 0 1897 249 90 6 chr17 74153022 74153644 -11284836 - L1MD2 LINE L1 -17 6342 5669 506 284 115 75 chr17 74153691 74154159 -11284321 + MLT1G1 LTR MaLR 107 593 -2 25 0 0 0 chr17 74154921 74154946 -11283534 + AT_rich Low_complexity Low_complexity 1 25 0 2479 70 0 7 chr17 74156020 74156322 -11282158 - AluY SINE Alu -11 300 1 295 328 56 68 chr17 74157170 74157493 -11280987 + LTR16C LTR ERVL 170 488 -3 196 271 59 145 chr17 74157731 74157952 -11280528 + MIR SINE MIR 54 255 -7 310 369 97 0 chr17 74158190 74158385 -11280095 - MIR SINE MIR -2 260 47 246 321 30 0 chr17 74159635 74159766 -11278714 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 190 0 32 32 chr17 74160142 74160173 -11278307 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 327 49 0 0 chr17 74161517 74161558 -11276922 + (CA)n Simple_repeat Simple_repeat 1 41 0 1204 175 31 39 chr17 74162107 74162156 -11276324 + AluJo SINE Alu 86 134 -178 2347 94 0 0 chr17 74162156 74162453 -11276027 + AluSg1 SINE Alu 3 299 -10 1204 175 31 39 chr17 74162453 74162632 -11275848 + AluJo SINE Alu 134 312 0 28 0 0 0 chr17 74163220 74163248 -11275232 + AT_rich Low_complexity Low_complexity 1 28 0 2233 121 108 8 chr17 74163282 74163671 -11274809 + MSTA LTR MaLR 1 428 0 429 147 0 0 chr17 74163898 74163966 -11274514 - 5S rRNA rRNA -32 89 22 4057 97 18 0 chr17 74163966 74164567 -11273913 + L1MA3 LINE L1 5689 6300 -5 237 139 0 0 chr17 74165746 74165782 -11272698 + Alu SINE Alu 1 36 -263 1511 156 0 0 chr17 74165782 74166006 -11272474 + AluSg/x SINE Alu 72 295 -17 22 0 0 0 chr17 74166953 74166975 -11271505 + AT_rich Low_complexity Low_complexity 1 22 0 2327 97 3 0 chr17 74168017 74168327 -11270153 + AluSp SINE Alu 3 313 0 1078 178 8 3 chr17 74169118 74169447 -11269033 + AluJo SINE Alu 8 295 -17 2076 122 23 3 chr17 74170843 74171147 -11267333 + AluSx SINE Alu 1 310 -2 2175 123 0 3 chr17 74171342 74171652 -11266828 - AluSc SINE Alu 0 309 1 275 284 63 0 chr17 74171690 74171785 -11266695 - L1ME LINE L1 -489 5632 5532 228 298 154 10 chr17 74172613 74172717 -11265763 + MIR SINE MIR 31 149 -113 2301 102 13 0 chr17 74173725 74174030 -11264450 + AluY SINE Alu 1 309 -2 519 191 29 0 chr17 74174410 74174515 -11263965 - AluY SINE Alu 0 311 204 1403 151 38 91 chr17 74174515 74174790 -11263690 - MER39 LTR ERV1 -199 508 187 338 158 144 122 chr17 74174772 74174911 -11263569 - MER21A LTR ERV1 -735 196 55 * 251 253 0 13 chr17 74175263 74175342 -11263138 + GA-rich Low_complexity Low_complexity 1 78 0 2547 54 0 13 chr17 74175452 74175767 -11262713 + AluY SINE Alu 1 311 0 1252 109 0 23 chr17 74176415 74176589 -11261891 + AluSx SINE Alu 1 170 -142 1358 327 112 22 chr17 74176798 74177759 -11260721 + L2 LINE L2 620 1667 -1647 1727 183 80 34 chr17 74177763 74178200 -11260280 - LTR2B LTR ERV1 0 490 34 1479 335 65 56 chr17 74178223 74179302 -11259178 + L2 LINE L2 1670 2764 -549 2173 110 0 10 chr17 74179302 74179625 -11258855 + AluSc SINE Alu 1 309 0 1479 335 65 56 chr17 74179625 74180126 -11258354 + L2 LINE L2 2764 3259 -54 185 0 0 39 chr17 74180409 74180435 -11258045 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 814 289 34 8 chr17 74181040 74181275 -11257205 - MIR SINE MIR -21 241 1 25 31 0 0 chr17 74181398 74181430 -11257050 + AT_rich Low_complexity Low_complexity 1 32 0 204 40 0 0 chr17 74183131 74183156 -11255324 + (T)n Simple_repeat Simple_repeat 1 25 0 180 348 38 65 chr17 74183299 74183483 -11254997 + MIR SINE MIR 50 228 -34 21 0 0 0 chr17 74183602 74183623 -11254857 + AT_rich Low_complexity Low_complexity 1 21 0 2044 108 6 51 chr17 74183777 74184092 -11254388 - AluSq SINE Alu -12 301 1 1701 174 0 35 chr17 74184436 74184752 -11253728 - AluJo SINE Alu -5 307 3 417 39 0 0 chr17 74185910 74185961 -11252519 + (CA)n Simple_repeat Simple_repeat 2 52 0 511 137 0 0 chr17 74185979 74186052 -11252428 + MLT2A1 LTR ERVL 235 307 -137 910 203 41 149 chr17 74186052 74186421 -11252059 + L1MC3 LINE L1 6032 6360 -1425 * 3649 207 10 22 chr17 74186413 74187240 -11251240 + L1MC3 LINE L1 6961 7777 -8 2822 171 35 0 chr17 74187651 74188160 -11250320 + MER39 LTR ERV1 2 528 -179 4458 52 2 4 chr17 74188160 74188721 -11249759 + L1PA8 LINE L1 5607 6166 -6 29 0 0 0 chr17 74188769 74188798 -11249682 + AT_rich Low_complexity Low_complexity 1 29 0 979 135 18 18 chr17 74188799 74188969 -11249511 + MER39 LTR ERV1 533 702 -5 207 0 0 0 chr17 74189473 74189496 -11248984 + (T)n Simple_repeat Simple_repeat 1 23 0 472 167 0 0 chr17 74192249 74192327 -11246153 + AluJ/FLAM SINE Alu 1 78 -234 741 161 0 8 chr17 74192345 74192469 -11246011 + FLAM_C SINE Alu 1 123 -20 370 341 16 8 chr17 74193858 74193984 -11244496 - MIR SINE MIR -66 142 16 314 212 0 12 chr17 74195445 74195530 -11242950 - L1PA16 LINE L1 0 6166 6083 1664 184 0 3 chr17 74195532 74195826 -11242654 - AluJo SINE Alu -14 298 6 375 320 0 0 chr17 74195960 74196057 -11242423 + MER5A DNA MER1_type 10 106 -83 1585 150 34 34 chr17 74197616 74197769 -11240711 + L1MA10 LINE L1 6005 6157 -177 189 0 0 0 chr17 74197769 74197790 -11240690 + (CA)n Simple_repeat Simple_repeat 2 22 0 1585 150 34 34 chr17 74197790 74197956 -11240524 + L1MA10 LINE L1 6156 6324 -10 192 350 0 17 chr17 74198633 74198693 -11239787 + L2 LINE L2 3141 3199 -73 401 296 87 0 chr17 74202225 74202340 -11236140 + L2 LINE L2 3148 3272 0 222 91 0 0 chr17 74202516 74202549 -11235931 + (TG)n Simple_repeat Simple_repeat 2 34 0 344 234 0 43 chr17 74202555 74202649 -11235831 - L1MC4 LINE L1 -1339 6703 6614 248 77 26 0 chr17 74202650 74202689 -11235791 + (TA)n Simple_repeat Simple_repeat 1 40 0 1871 145 10 30 chr17 74203305 74203608 -11234872 - AluSx SINE Alu -15 297 1 2663 259 43 27 chr17 74203618 74204931 -11233549 - L1ME2 LINE L1 -9 6155 4829 441 0 0 0 chr17 74207856 74207905 -11230575 + (TA)n Simple_repeat Simple_repeat 1 49 0 264 364 68 34 chr17 74208318 74208672 -11229808 - L2 LINE L2 -609 2705 2340 2162 104 0 0 chr17 74208905 74209211 -11229269 + AluSg SINE Alu 3 308 0 272 278 113 30 chr17 74210495 74210628 -11227852 + MIR SINE MIR 61 204 -58 24 53 0 0 chr17 74210648 74210686 -11227794 + AT_rich Low_complexity Low_complexity 1 38 0 229 318 114 15 chr17 74211053 74211185 -11227295 - LTR33 LTR ERVL -350 171 27 1609 146 61 31 chr17 74212346 74212640 -11225840 - AluSx SINE Alu -9 303 1 28 29 0 0 chr17 74213248 74213283 -11225197 + AT_rich Low_complexity Low_complexity 1 35 0 1461 223 6 25 chr17 74213367 74213681 -11224799 + AluJb SINE Alu 4 311 -1 310 363 82 0 chr17 74214345 74214491 -11223989 - MIR3 SINE MIR -17 191 34 2084 87 19 84 chr17 74215242 74215564 -11222916 + AluSg SINE Alu 1 301 -9 1382 188 3 76 chr17 74215868 74216172 -11222308 + AluJo SINE Alu 1 282 -30 259 44 44 0 chr17 74216177 74216222 -11222258 + (TAAAA)n Simple_repeat Simple_repeat 3 49 0 193 104 0 42 chr17 74216672 74216720 -11221760 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 219 326 11 33 chr17 74216898 74216990 -11221490 + L2 LINE L2 1363 1452 -1862 2663 92 17 6 chr17 74217197 74217557 -11220923 + THE1B LTR MaLR 1 364 0 1795 144 57 41 chr17 74217667 74218036 -11220444 + THE1C LTR MaLR 1 375 0 371 361 27 27 chr17 74218393 74218656 -11219824 - L2 LINE L2 -496 2818 2556 336 94 0 0 chr17 74218888 74218941 -11219539 + (CA)n Simple_repeat Simple_repeat 2 54 0 353 219 24 18 chr17 74219484 74219653 -11218827 + (TA)n Simple_repeat Simple_repeat 1 170 0 238 354 115 0 chr17 74219824 74219937 -11218543 + L2 LINE L2 3142 3267 -5 353 216 11 34 chr17 74220774 74220950 -11217530 + (TATATG)n Simple_repeat Simple_repeat 3 174 0 219 216 11 23 chr17 74220998 74221086 -11217394 + (TA)n Simple_repeat Simple_repeat 1 87 0 211 357 55 22 chr17 74221362 74221634 -11216846 - L2 LINE L2 -477 2837 2557 225 211 0 0 chr17 74221870 74221922 -11216558 + (CA)n Simple_repeat Simple_repeat 2 53 0 351 313 70 8 chr17 74223688 74223816 -11214664 + MIR SINE MIR 2 137 -125 299 284 88 10 chr17 74225533 74225635 -11212845 + MIR3 SINE MIR 92 201 -7 21 0 0 0 chr17 74225708 74225729 -11212751 + AT_rich Low_complexity Low_complexity 1 21 0 6852 150 45 11 chr17 74226043 74226975 -11211505 - Tigger3b DNA MER2_type -1797 1231 249 2550 102 8 6 chr17 74226975 74227338 -11211142 + THE1B LTR MaLR 1 364 0 6852 150 45 11 chr17 74227338 74227595 -11210885 - Tigger3b DNA MER2_type -2779 249 2 262 296 0 11 chr17 74227742 74227830 -11210650 - L2 LINE L2 -189 3083 2997 203 267 0 0 chr17 74227869 74227914 -11210566 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 215 299 103 10 chr17 74228831 74228928 -11209552 - MIR SINE MIR -80 128 23 25 0 0 0 chr17 74229985 74230010 -11208470 + AT_rich Low_complexity Low_complexity 1 25 0 468 200 86 29 chr17 74230199 74230339 -11208141 + L1ME3A LINE L1 6018 6165 -5 * 1513 266 136 60 chr17 74230338 74230721 -11207759 - HAL1 LINE L1 -33 2474 2122 1793 178 0 0 chr17 74230721 74231007 -11207473 - AluJo SINE Alu -11 301 16 1513 266 136 60 chr17 74231007 74231182 -11207298 - HAL1 LINE L1 -385 2122 1962 270 0 0 0 chr17 74231182 74231212 -11207268 + (TG)n Simple_repeat Simple_repeat 2 31 0 1513 266 136 60 chr17 74231212 74231925 -11206555 - HAL1 LINE L1 -545 1962 1105 312 283 62 18 chr17 74232400 74232513 -11205967 + L2 LINE L2 3154 3271 -1 405 333 68 17 chr17 74232515 74232749 -11205731 - MIR SINE MIR 0 262 17 22 35 0 0 chr17 74233065 74233094 -11205386 + AT_rich Low_complexity Low_complexity 1 29 0 593 255 39 0 chr17 74233449 74233602 -11204878 + MER45A DNA AcHobo 2 160 -18 529 264 56 60 chr17 74234270 74234486 -11203994 - MLT1K LTR MaLR 0 588 374 1325 282 63 11 chr17 74235175 74235636 -11202844 - MLT1J LTR MaLR -26 485 1 1056 282 176 48 chr17 74235998 74236470 -11202010 - L2 LINE L2 0 3313 2903 1742 97 93 0 chr17 74236470 74236739 -11201741 + L1PA13 LINE L1 5865 6158 -5 1056 282 176 48 chr17 74236739 74236763 -11201717 - L2 LINE L2 -410 2903 2883 207 0 0 0 chr17 74236763 74236786 -11201694 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1056 282 176 48 chr17 74236786 74237342 -11201138 - L2 LINE L2 -430 2883 2111 1730 195 30 116 chr17 74237348 74237464 -11201016 + LTR9 LTR ERV1 1 125 -487 2299 97 3 0 chr17 74237464 74237775 -11200705 - AluSx SINE Alu 0 312 1 1730 195 30 116 chr17 74237775 74238221 -11200259 + LTR9 LTR ERV1 125 515 -97 1347 272 179 36 chr17 74238299 74238912 -11199568 - L2 LINE L2 -1227 2087 1387 249 83 0 0 chr17 74239604 74239640 -11198840 + (TG)n Simple_repeat Simple_repeat 2 37 0 275 222 50 30 chr17 74239646 74239745 -11198735 + L1MC4 LINE L1 7942 8042 0 31 58 0 0 chr17 74239747 74239799 -11198681 + AT_rich Low_complexity Low_complexity 1 52 0 822 267 99 12 chr17 74239860 74240179 -11198301 - L1M4 LINE L1 -1312 4834 4469 189 0 0 0 chr17 74240179 74240200 -11198280 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 822 267 99 12 chr17 74240200 74240296 -11198184 - L1M4 LINE L1 -1677 4469 4383 265 330 30 10 chr17 74240501 74240698 -11197782 - L1MEc LINE L1 -3995 2401 2201 368 330 11 64 chr17 74240745 74240933 -11197547 + MER91B DNA MER1_type 2 179 -11 268 325 39 17 chr17 74241569 74241780 -11196700 - L1 LINE L1 -1131 5015 4801 2322 90 38 41 chr17 74241792 74242157 -11196323 + THE1B LTR MaLR 1 364 0 1017 131 68 0 chr17 74242511 74242702 -11195778 + L1MA5 LINE L1 6092 6295 -5 266 308 199 12 chr17 74242942 74243374 -11195106 - L1 LINE L1 -1504 4642 4130 3374 128 46 32 chr17 74243980 74244605 -11193875 - L1MA5 LINE L1 -5 6295 5662 23 33 0 0 chr17 74244616 74244646 -11193834 + AT_rich Low_complexity Low_complexity 1 30 0 26 64 0 0 chr17 74245228 74245275 -11193205 + AT_rich Low_complexity Low_complexity 1 47 0 5752 132 6 2 chr17 74247304 74248207 -11190273 - L1PA15 LINE L1 -6 6159 5254 345 290 80 22 chr17 74248262 74248400 -11190080 - MIR3 SINE MIR -44 164 19 440 283 9 0 chr17 74248606 74248719 -11189761 - MER81 DNA DNA 0 114 1 223 287 66 25 chr17 74249057 74249179 -11189301 - MIR SINE MIR -59 203 77 351 113 0 0 chr17 74249536 74249589 -11188891 + (CA)n Simple_repeat Simple_repeat 2 54 0 1094 244 16 12 chr17 74249688 74250007 -11188473 + MER33 DNA MER1_type 4 323 -1 6733 57 23 1 chr17 74250745 74252449 -11186031 + L1PA7 LINE L1 4453 6148 -6 270 95 0 0 chr17 74252467 74252509 -11185971 + (TG)n Simple_repeat Simple_repeat 2 43 0 389 286 218 0 chr17 74252829 74252976 -11185504 + MER5A DNA MER1_type 10 188 -1 976 329 111 5 chr17 74253049 74253463 -11185017 - LTR16B LTR ERVL -6 458 1 1777 151 0 11 chr17 74253545 74253817 -11184663 + AluJo SINE Alu 6 274 -38 461 152 13 0 chr17 74253820 74253899 -11184581 - L1MC1 LINE L1 -197 6136 6057 180 200 0 0 chr17 74253978 74254023 -11184457 + A-rich Low_complexity Low_complexity 1 45 0 3031 138 16 66 chr17 74254034 74254644 -11183836 + L1MC1 LINE L1 5754 6333 0 379 290 110 50 chr17 74255500 74255700 -11182780 - MIR SINE MIR 0 262 51 257 339 52 35 chr17 74255714 74255888 -11182592 - MER5A DNA MER1_type -1 188 1 420 20 0 0 chr17 74257175 74257224 -11181256 + (CA)n Simple_repeat Simple_repeat 2 50 0 1278 192 174 23 chr17 74257281 74257656 -11180824 - MLT1C LTR MaLR -31 428 9 2301 164 44 2 chr17 74257656 74258065 -11180415 - MSTB LTR MaLR 0 426 1 1395 167 205 20 chr17 74258550 74258843 -11179637 - MER7A DNA MER2_type -1 345 1 2467 66 0 3 chr17 74259103 74259405 -11179075 - AluSc SINE Alu -8 301 1 21 0 0 0 chr17 74260008 74260029 -11178451 + AT_rich Low_complexity Low_complexity 1 21 0 392 35 0 53 chr17 74260082 74260139 -11178341 - L1P3 LINE L1 -400 5754 5701 1723 56 0 22 chr17 74260141 74260372 -11178108 + L1PA7 LINE L1 5929 6154 0 311 216 195 33 chr17 74261974 74262137 -11176343 + MIR SINE MIR 14 200 -61 194 203 0 34 chr17 74262138 74262197 -11176283 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 5583 129 17 5 chr17 74262528 74263793 -11174687 + L1PA16 LINE L1 4879 6157 -9 1498 74 5 5 chr17 74263800 74263989 -11174491 + AluSq SINE Alu 100 288 -25 207 0 0 0 chr17 74263992 74264015 -11174465 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 180 0 0 0 chr17 74264781 74264801 -11173679 + (TAAAAA)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr17 74264812 74264841 -11173639 + AT_rich Low_complexity Low_complexity 1 29 0 288 256 26 0 chr17 74264909 74264987 -11173493 + MIR SINE MIR 135 214 -48 1274 168 14 0 chr17 74265258 74265466 -11173014 - AluJb SINE Alu -16 296 86 488 319 56 41 chr17 74265474 74266069 -11172411 - L1ME LINE L1 -299 5865 5258 322 247 210 43 chr17 74266238 74266400 -11172080 - MER5A DNA MER1_type 0 189 1 2071 124 0 33 chr17 74267632 74267938 -11170542 - AluSx SINE Alu -16 296 1 201 39 0 0 chr17 74270098 74270124 -11168356 + (CA)n Simple_repeat Simple_repeat 1 26 0 595 236 23 65 chr17 74270650 74270866 -11167614 + MER3 DNA MER1_type 3 209 0 271 339 48 24 chr17 74271095 74271263 -11167217 + MIR SINE MIR 17 188 -74 2359 88 0 0 chr17 74271526 74271820 -11166660 + AluSg SINE Alu 1 294 -16 933 211 77 0 chr17 74271953 74272161 -11166319 + MER58A DNA MER1_type 1 224 0 190 300 67 0 chr17 74272267 74272327 -11166153 - L2 LINE L2 -4 3309 3246 240 313 31 31 chr17 74272328 74272424 -11166056 - MLT1J LTR MaLR -341 170 75 359 314 0 9 chr17 74273442 74273547 -11164933 + MER5A DNA MER1_type 84 187 -2 389 339 16 0 chr17 74273649 74273770 -11164710 - L2 LINE L2 0 3313 3191 1534 115 12 0 chr17 74273782 74274025 -11164455 + L1MA1 LINE L1 6057 6302 0 24 53 0 0 chr17 74275570 74275608 -11162872 + AT_rich Low_complexity Low_complexity 1 38 0 729 284 22 14 chr17 74275738 74275960 -11162520 + MER58A DNA MER1_type 1 224 0 276 385 0 11 chr17 74275963 74276054 -11162426 + MIR SINE MIR 12 101 -161 267 146 0 0 chr17 74277495 74277536 -11160944 - L2 LINE L2 -93 3220 3180 342 179 47 132 chr17 74278292 74278316 -11160164 - L2 LINE L2 -8 3264 3240 2342 165 49 2 chr17 74278316 74278723 -11159757 - MSTB LTR MaLR 0 426 1 342 179 47 132 chr17 74278723 74278804 -11159676 - L2 LINE L2 -32 3240 3168 1506 211 59 111 chr17 74279660 74280199 -11158281 - MLT2B1 LTR ERVL 0 515 5 302 309 110 0 chr17 74280548 74280684 -11157796 - MIR SINE MIR -13 249 99 576 229 6 103 chr17 74281106 74281151 -11157329 + MER58A DNA MER1_type 1 49 -292 2192 104 13 0 chr17 74281151 74281449 -11157031 - AluSp SINE Alu -11 302 1 576 229 6 103 chr17 74281449 74281468 -11157012 + MER58A DNA MER1_type 49 68 -273 1631 187 0 24 chr17 74281468 74281762 -11156718 - AluJo SINE Alu -20 292 6 576 229 6 103 chr17 74281762 74281871 -11156609 + MER58A DNA MER1_type 68 158 -66 234 91 0 0 chr17 74283786 74283819 -11154661 + (TG)n Simple_repeat Simple_repeat 2 34 0 252 278 79 48 chr17 74284569 74284695 -11153785 - MIR3 SINE MIR -1 207 78 3183 28 3 8 chr17 74284843 74285231 -11153249 + L1PA4 LINE L1 5770 6155 0 24 32 0 0 chr17 74286491 74286522 -11151958 + AT_rich Low_complexity Low_complexity 1 31 0 1292 99 0 0 chr17 74287277 74287439 -11151041 + AluSq SINE Alu 96 257 -56 1677 130 0 4 chr17 74287765 74287996 -11150484 - AluJb SINE Alu -15 297 68 10458 77 3 1 chr17 74287997 74289343 -11149137 - L1P3 LINE L1 -5112 1349 1 327 94 0 0 chr17 74289391 74289444 -11149036 + L1MB4 LINE L1 6127 6179 -1 1893 246 58 80 chr17 74289457 74290298 -11148182 - L1MC4a LINE L1 -1541 6267 5445 370 292 38 52 chr17 74290380 74290668 -11147812 - L1MCc LINE L1 -4992 1431 1148 1573 243 67 42 chr17 74291022 74291503 -11146977 - MLT1D LTR MaLR -9 496 4 342 234 43 0 chr17 74291619 74291713 -11146767 - LTR16A LTR ERVL -5 445 348 1101 186 81 124 chr17 74291713 74291782 -11146698 - MLT1C LTR MaLR 0 467 397 2242 101 7 0 chr17 74291782 74292079 -11146401 + AluSp SINE Alu 1 299 -14 1101 186 81 124 chr17 74292079 74292477 -11146003 - MLT1C LTR MaLR -70 397 20 612 311 95 42 chr17 74292500 74292764 -11145716 - LTR16A LTR ERVL -86 371 94 2887 280 97 49 chr17 74292857 74294018 -11144462 - HERV16 LTR ERVL -3506 1490 247 1812 113 0 34 chr17 74294018 74294284 -11144196 - AluSq SINE Alu -18 295 39 2887 280 97 49 chr17 74294284 74294544 -11143936 - HERV16 LTR ERVL -4749 247 1 1022 316 130 0 chr17 74294549 74294941 -11143539 - LTR16A LTR ERVL -5 445 3 953 146 5 42 chr17 74295214 74295235 -11143245 - L1MA4 LINE L1 -360 5791 5771 2180 124 3 40 chr17 74295235 74295613 -11142867 - L1PB1 LINE L1 -3 6148 5785 953 146 5 42 chr17 74295613 74295808 -11142672 - L1MA4 LINE L1 -380 5771 5637 3681 208 100 53 chr17 74295878 74297093 -11141387 + L1MC4a LINE L1 6015 7285 -523 23 78 0 0 chr17 74297126 74297177 -11141303 + AT_rich Low_complexity Low_complexity 1 51 0 434 262 6 22 chr17 74297218 74297401 -11141079 + (TA)n Simple_repeat Simple_repeat 1 180 0 2424 74 3 0 chr17 74297521 74297819 -11140661 + AluSp SINE Alu 1 299 -14 210 415 11 0 chr17 74298899 74298993 -11139487 - MIR SINE MIR -81 127 33 2351 97 6 0 chr17 74300067 74300378 -11138102 + AluSp SINE Alu 1 313 0 1457 119 12 66 chr17 74300467 74300710 -11137770 - MER30 DNA MER1_type 0 230 1 27 0 0 0 chr17 74301100 74301127 -11137353 + AT_rich Low_complexity Low_complexity 1 27 0 193 0 0 86 chr17 74301515 74301550 -11136930 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1895 134 0 0 chr17 74301603 74301864 -11136616 + AluSq SINE Alu 28 288 -25 1592 209 7 0 chr17 74301974 74302257 -11136223 - AluJo SINE Alu -27 285 1 252 0 0 0 chr17 74303031 74303059 -11135421 + (GA)n Simple_repeat Simple_repeat 1 28 0 355 354 7 0 chr17 74304211 74304355 -11134125 + CT-rich Low_complexity Low_complexity 4 148 0 1811 136 4 4 chr17 74305655 74305928 -11132552 + AluSx SINE Alu 1 273 -39 1269 239 46 55 chr17 74306994 74307433 -11131047 + L1MB7 LINE L1 5740 6174 -10 2297 88 0 7 chr17 74308822 74309119 -11129361 - AluSg SINE Alu -15 295 1 456 265 179 0 chr17 74309297 74309448 -11129032 - MER20 DNA MER1_type -1 218 41 473 282 87 31 chr17 74309497 74309692 -11128788 + MIR SINE MIR 19 224 -38 1749 143 7 4 chr17 74309898 74310170 -11128310 + AluSx SINE Alu 38 310 -2 636 320 20 24 chr17 74310373 74310620 -11127860 - MIR SINE MIR -5 257 12 234 160 0 0 chr17 74311084 74311134 -11127346 + (CA)n Simple_repeat Simple_repeat 2 51 0 1905 146 29 37 chr17 74311846 74312223 -11126257 + THE1C LTR MaLR 1 374 -1 288 0 0 0 chr17 74313381 74313413 -11125067 + (CA)n Simple_repeat Simple_repeat 2 33 0 484 363 84 8 chr17 74313559 74313821 -11124659 - L2 LINE L2 -205 3108 2827 338 367 106 21 chr17 74313875 74314251 -11124229 - L2 LINE L2 -452 2862 2455 519 304 32 46 chr17 74314351 74314568 -11123912 - MIR SINE MIR -38 224 11 271 346 125 0 chr17 74314695 74314831 -11123649 - MIR SINE MIR 0 262 110 1019 238 83 3 chr17 74314875 74315165 -11123315 + L1ME4a LINE L1 5355 5667 -497 1622 234 150 2 chr17 74315231 74315683 -11122797 - MLT2B1 LTR ERVL 0 520 2 1860 127 48 9 chr17 74316030 74316346 -11122134 + THE1C LTR MaLR 1 328 -47 317 367 42 30 chr17 74316918 74317155 -11121325 + L2 LINE L2 2814 3053 -219 473 315 19 6 chr17 74317715 74317877 -11120603 - MIR SINE MIR -31 231 68 1864 80 0 4 chr17 74319113 74319376 -11119104 + L1P LINE L1 5011 5272 -874 243 61 0 0 chr17 74320398 74320431 -11118049 + (A)n Simple_repeat Simple_repeat 1 33 0 308 211 62 16 chr17 74322205 74322333 -11116147 + L1ME4a LINE L1 5766 5899 -222 269 200 53 21 chr17 74322378 74322473 -11116007 + L1ME4a LINE L1 5984 6081 -40 947 281 22 0 chr17 74322652 74322880 -11115600 - MIR SINE MIR -25 237 5 558 43 0 0 chr17 74325144 74325213 -11113267 + (TG)n Simple_repeat Simple_repeat 1 69 0 727 188 18 12 chr17 74325823 74325993 -11112487 - L1MA4 LINE L1 0 6300 6130 2172 120 0 0 chr17 74325993 74326285 -11112195 - AluSx SINE Alu -20 292 1 2341 69 0 7 chr17 74326450 74326741 -11111739 + AluY SINE Alu 9 297 -14 826 188 29 1 chr17 74326747 74326938 -11111542 - L1MA4 LINE L1 -9 6288 6073 198 313 52 10 chr17 74328433 74328529 -11109951 + L3 LINE CR1 1471 1570 -7 318 365 76 13 chr17 74328592 74328907 -11109573 + L2 LINE L2 2397 2731 -583 322 303 32 19 chr17 74328977 74329132 -11109348 - MER103 DNA DNA -7 159 3 234 91 36 127 chr17 74329390 74329445 -11109035 - AluSq SINE Alu -12 287 238 1125 103 7 7 chr17 74329446 74329601 -11108879 - AluSq SINE Alu -129 184 30 4016 113 7 10 chr17 74329697 74330305 -11108175 - L1PB2 LINE L1 -7 6144 5539 687 291 54 24 chr17 74330667 74330962 -11107518 - L3b LINE CR1 -178 1405 1102 216 188 16 31 chr17 74331308 74331372 -11107108 + (TA)n Simple_repeat Simple_repeat 2 64 0 414 300 67 28 chr17 74332226 74332553 -11105927 + L1M4 LINE L1 3497 3836 -2310 695 109 76 17 chr17 74334196 74334315 -11104165 - AluSg/x SINE Alu -14 298 173 180 338 25 12 chr17 74334613 74334693 -11103787 + L3 LINE CR1 1231 1311 -266 1971 124 17 0 chr17 74334809 74335107 -11103373 - AluSx SINE Alu -9 303 1 22 0 0 0 chr17 74335158 74335180 -11103300 + AT_rich Low_complexity Low_complexity 1 22 0 549 338 157 22 chr17 74335440 74335810 -11102670 - L2 LINE L2 0 3313 2894 2102 112 0 40 chr17 74335813 74336134 -11102346 + AluSc SINE Alu 1 308 -1 342 283 47 9 chr17 74336304 74336410 -11102070 - L2 LINE L2 0 3313 3204 202 179 36 18 chr17 74336579 74336635 -11101845 + (CATA)n Simple_repeat Simple_repeat 2 58 0 288 285 16 24 chr17 74336635 74336758 -11101722 - L1ME LINE L1 -448 5673 5552 228 67 0 0 chr17 74337977 74338007 -11100473 + (CA)n Simple_repeat Simple_repeat 2 31 0 218 351 26 0 chr17 74338658 74338735 -11099745 - MIR3 SINE MIR -6 202 124 429 271 37 0 chr17 74339048 74339155 -11099325 - MER81 DNA DNA 0 114 4 735 262 101 40 chr17 74339872 74340120 -11098360 + MLT1H LTR MaLR 25 287 -262 258 306 18 88 chr17 74340170 74340340 -11098140 + MLT1H LTR MaLR 392 549 0 261 0 0 0 chr17 74341563 74341592 -11096888 + (A)n Simple_repeat Simple_repeat 1 29 0 2075 127 0 0 chr17 74342758 74343041 -11095439 - AluSx SINE Alu -29 283 1 390 21 0 0 chr17 74343259 74343306 -11095174 + (CA)n Simple_repeat Simple_repeat 2 48 0 213 39 0 0 chr17 74343305 74343331 -11095149 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 1976 163 50 43 chr17 74343884 74344409 -11094071 - MLT2A2 LTR ERVL 0 554 1 652 246 31 31 chr17 74344794 74345022 -11093458 - L1MB8 LINE L1 -6 6172 5945 2527 137 31 19 chr17 74346411 74346834 -11091646 - MSTA LTR MaLR 0 428 1 24 67 0 0 chr17 74347249 74347294 -11091186 + AT_rich Low_complexity Low_complexity 1 45 0 273 229 31 73 chr17 74347330 74347426 -11091054 - L1ME4a LINE L1 -56 6065 5974 496 249 29 28 chr17 74347482 74347655 -11090825 - MLT1H LTR MaLR -8 575 405 * 545 268 65 61 chr17 74347653 74347906 -11090574 - MLT1H LTR MaLR -246 303 12 253 355 47 0 chr17 74348016 74348185 -11090295 - L1ME4a LINE L1 -268 5853 5677 384 230 58 11 chr17 74350594 74350681 -11087799 - L2 LINE L2 0 3313 3223 492 287 43 63 chr17 74350938 74351192 -11087288 + MIR SINE MIR 11 259 -3 477 34 0 0 chr17 74351305 74351337 -11087143 + (CA)n Simple_repeat Simple_repeat 1 91 0 477 34 0 0 chr17 74351337 74351396 -11087084 + (CA)n Simple_repeat Simple_repeat 2 60 0 275 229 0 29 chr17 74351453 74351523 -11086957 - LTR33 LTR ERVL 0 521 454 525 307 26 5 chr17 74351667 74351856 -11086624 - LTR33 LTR ERVL -327 194 2 3795 141 16 0 chr17 74352784 74353396 -11085084 - L1PA15 LINE L1 -12 6153 5532 4884 207 34 9 chr17 74353396 74353914 -11084566 + L1P LINE L1 2792 3295 -2851 216 0 0 0 chr17 74353914 74353938 -11084542 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4884 207 34 9 chr17 74353938 74354279 -11084201 + L1P LINE L1 3295 3688 -2458 198 0 0 0 chr17 74354279 74354301 -11084179 + (CAA)n Simple_repeat Simple_repeat 3 24 0 4884 207 34 9 chr17 74354301 74354546 -11083934 + L1P LINE L1 3688 3925 -2221 279 277 0 0 chr17 74355046 74355111 -11083369 + MER20 DNA MER1_type 1 65 -154 228 213 0 0 chr17 74355116 74355163 -11083317 + MER20 DNA MER1_type 172 218 -1 231 114 0 0 chr17 74356165 74356200 -11082280 + (CA)n Simple_repeat Simple_repeat 1 35 0 798 249 18 44 chr17 74357391 74357616 -11080864 + LTR33 LTR ERVL 1 219 -302 240 246 62 0 chr17 74357707 74357772 -11080708 + LTR33 LTR ERVL 380 448 -73 326 195 12 0 chr17 74358331 74358413 -11080067 + (TA)n Simple_repeat Simple_repeat 2 84 0 22 0 0 0 chr17 74358588 74358610 -11079870 + AT_rich Low_complexity Low_complexity 1 22 0 231 203 0 0 chr17 74359197 74359256 -11079224 + (TG)n Simple_repeat Simple_repeat 2 60 0 1286 193 11 19 chr17 74360368 74360632 -11077848 + AluJb SINE Alu 44 305 -7 261 289 0 113 chr17 74360639 74360736 -11077744 - MIR3 SINE MIR -13 195 110 255 160 60 0 chr17 74361072 74361122 -11077358 - MER96B DNA MER1_type? -175 242 190 368 68 14 27 chr17 74361345 74361418 -11077062 - MER96B DNA MER1_type? -242 175 104 1923 126 24 7 chr17 74361422 74361716 -11076764 + AluSx SINE Alu 1 299 -13 515 184 0 7 chr17 74361716 74361868 -11076612 + (TA)n Simple_repeat Simple_repeat 2 152 0 214 266 191 0 chr17 74361953 74362047 -11076433 - MIR SINE MIR -5 257 146 6041 24 0 0 chr17 74362649 74363349 -11075131 + L1PA3 LINE L1 5453 6152 -3 239 333 104 0 chr17 74364230 74364326 -11074154 - L2 LINE L2 -9 3263 3158 339 96 0 0 chr17 74364431 74364483 -11073997 + (TA)n Simple_repeat Simple_repeat 2 53 0 3189 54 0 26 chr17 74365645 74366068 -11072412 - L1PA7 LINE L1 -3 6151 5740 6169 170 12 14 chr17 74366241 74367342 -11071138 - Ricksha DNA DNA -328 2918 1821 919 308 4 4 chr17 74367352 74367625 -11070855 - Ricksha DNA DNA -2948 298 26 4907 255 78 64 chr17 74368288 74370803 -11067677 + L1MD1 LINE L1 16 2564 -3976 967 176 12 2 chr17 74370803 74371130 -11067350 + MSTD LTR MaLR 1 396 0 1065 262 74 7 chr17 74371133 74371711 -11066769 + L1MD1 LINE L1 2564 3347 -3193 321 260 0 14 chr17 74371711 74371784 -11066696 + Tigger5 DNA MER2_type 1 72 -2251 2080 142 0 0 chr17 74371794 74372090 -11066390 - AluSx SINE Alu -16 296 1 4666 232 61 69 chr17 74372169 74373861 -11064619 + L1MD1 LINE L1 3659 5364 -1176 2098 110 0 0 chr17 74373861 74374166 -11064314 + AluSg SINE Alu 1 305 0 4666 232 61 69 chr17 74374166 74374400 -11064080 + L1MD1 LINE L1 5364 5571 -969 2400 56 0 16 chr17 74374400 74374705 -11063775 + AluY SINE Alu 1 300 -11 4666 232 61 69 chr17 74374705 74374822 -11063658 + L1MD1 LINE L1 5571 5687 -853 * 4793 165 24 7 chr17 74374809 74375694 -11062786 + L1MA8 LINE L1 5388 6287 -4 4029 217 23 13 chr17 74375690 74376638 -11061842 + L1MD1 LINE L1 5677 6634 -2 * 2028 125 0 3 chr17 74376783 74377079 -11061401 + AluSq SINE Alu 1 295 -18 925 343 94 14 chr17 74377902 74378418 -11060062 + L2 LINE L2 2751 3313 0 236 304 108 29 chr17 74379019 74379121 -11059359 + L2 LINE L2 3182 3291 -22 240 86 0 0 chr17 74380590 74380625 -11057855 + (CA)n Simple_repeat Simple_repeat 1 35 0 604 235 40 105 chr17 74381426 74381673 -11056807 + MIR SINE MIR 4 234 -28 200 204 0 0 chr17 74382522 74382571 -11055909 + A-rich Low_complexity Low_complexity 1 49 0 744 286 106 42 chr17 74382685 74383213 -11055267 - L1ME4a LINE L1 -70 6051 5490 1962 131 0 0 chr17 74383670 74383952 -11054528 + AluSx SINE Alu 2 283 -29 346 167 0 0 chr17 74383898 74383952 -11054528 + AluS SINE Alu 230 312 0 262 0 0 0 chr17 74383952 74383981 -11054499 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 519 254 120 24 chr17 74384929 74385138 -11053342 + MIR SINE MIR 32 260 -2 526 324 64 10 chr17 74387107 74387311 -11051169 + MIR SINE MIR 35 249 -13 2862 162 71 24 chr17 74387345 74387919 -11050561 + MER7C DNA MER2_type 1 601 -1 246 116 0 0 chr17 74387945 74387988 -11050492 + (CA)n Simple_repeat Simple_repeat 2 44 0 1815 180 53 100 chr17 74387999 74388108 -11050372 + L1MA8 LINE L1 5691 5804 -487 207 0 0 0 chr17 74388108 74388131 -11050349 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1815 180 53 100 chr17 74388131 74388150 -11050330 + L1MA8 LINE L1 5804 5822 -469 2707 84 19 5 chr17 74388150 74388519 -11049961 + THE1C LTR MaLR 2 375 0 1815 180 53 100 chr17 74388519 74388968 -11049512 + L1MA8 LINE L1 5822 6242 -49 44 20 0 0 chr17 74388970 74389021 -11049459 + AT_rich Low_complexity Low_complexity 1 51 0 2119 122 0 0 chr17 74389021 74389308 -11049172 - AluSq SINE Alu -26 287 1 740 101 0 0 chr17 74389327 74389436 -11049044 + L1MB1 LINE L1 6060 6168 0 26 30 0 0 chr17 74389739 74389772 -11048708 + AT_rich Low_complexity Low_complexity 1 33 0 195 213 106 0 chr17 74389798 74389845 -11048635 + L2 LINE L2 2992 3043 -229 1698 172 41 87 chr17 74389960 74390373 -11048107 + MSTD LTR MaLR 3 396 0 511 164 173 0 chr17 74392242 74392352 -11046128 + L1MC1 LINE L1 6187 6315 -18 2074 149 0 0 chr17 74392372 74392674 -11045806 + AluSx SINE Alu 1 302 -10 39 60 0 0 chr17 74392775 74392842 -11045638 + AT_rich Low_complexity Low_complexity 1 67 0 1881 129 12 58 chr17 74393022 74393348 -11045132 - AluSp SINE Alu -2 311 1 204 240 211 19 chr17 74393646 74393750 -11044730 + MER5B DNA MER1_type 1 124 -54 216 225 0 0 chr17 74394176 74394216 -11044264 - L2 LINE L2 -10 3303 3264 226 213 0 0 chr17 74394544 74394591 -11043889 + HsTC2 DNA Tc2 31 77 -1821 218 380 60 24 chr17 74396581 74396747 -11041733 - L2 LINE L2 -994 2320 2149 465 184 27 0 chr17 74398840 74398987 -11039493 + (TCTA)n Simple_repeat Simple_repeat 2 152 0 3504 169 16 13 chr17 74400094 74400776 -11037704 - L1MA8 LINE L1 -11 6280 5597 338 301 121 25 chr17 74400777 74400976 -11037504 - MIR SINE MIR -2 260 43 2102 129 7 7 chr17 74401239 74401549 -11036931 - AluSq SINE Alu -3 310 1 757 52 0 0 chr17 74402200 74402297 -11036183 - L1PA8 LINE L1 -7 6165 6069 2063 94 35 0 chr17 74402363 74402649 -11035831 + AluSq SINE Alu 1 296 -17 2162 108 0 0 chr17 74403690 74403977 -11034503 + AluSc SINE Alu 1 287 -22 2265 54 0 0 chr17 74404045 74404325 -11034155 - L1PA6 LINE L1 -4 6150 5871 296 261 0 14 chr17 74405476 74405545 -11032935 - tRNA-Ile-ATT tRNA tRNA -7 70 3 2535 57 0 3 chr17 74405691 74405992 -11032488 - AluY SINE Alu -11 300 1 29 60 0 0 chr17 74407015 74407065 -11031415 + AT_rich Low_complexity Low_complexity 1 50 0 439 315 54 20 chr17 74407618 74407821 -11030659 + MIR SINE MIR 45 254 -8 206 175 0 25 chr17 74408848 74408888 -11029592 + T-rich Low_complexity Low_complexity 4 42 0 21 36 0 0 chr17 74409336 74409364 -11029116 + AT_rich Low_complexity Low_complexity 1 28 0 405 322 45 11 chr17 74409754 74409931 -11028549 + MIR SINE MIR 9 191 -71 763 271 33 16 chr17 74410022 74410266 -11028214 + MIR SINE MIR 1 248 -14 279 253 12 60 chr17 74410589 74410672 -11027808 - L2 LINE L2 0 3272 3194 427 160 180 201 chr17 74410849 74411093 -11027387 + MER8 DNA MER2_type 1 239 0 197 343 0 59 chr17 74412453 74412555 -11025925 - L2 LINE L2 -4 3268 3173 254 150 0 33 chr17 74413439 74413499 -11024981 + (GAAAA)n Simple_repeat Simple_repeat 3 60 0 1993 118 3 36 chr17 74413616 74413921 -11024559 + AluSq SINE Alu 1 295 -18 229 338 13 0 chr17 74414524 74414601 -11023879 + L2 LINE L2 3194 3271 -1 1939 117 0 4 chr17 74415152 74415418 -11023062 - AluSg SINE Alu 0 310 46 22 35 0 0 chr17 74415425 74415454 -11023026 + AT_rich Low_complexity Low_complexity 1 29 0 656 134 0 55 chr17 74415713 74415840 -11022640 + L1PA8 LINE L1 6048 6167 -5 369 278 40 3 chr17 74416099 74416251 -11022229 + MIR SINE MIR 65 259 -3 206 259 0 35 chr17 74416269 74416327 -11022153 + MER5A DNA MER1_type 129 184 -5 2027 115 0 24 chr17 74416337 74416633 -11021847 + AluSg SINE Alu 2 290 -20 450 281 0 0 chr17 74416664 74416778 -11021702 + MER3 DNA MER1_type 41 154 -55 1418 176 130 0 chr17 74416783 74417113 -11021367 + MER3 DNA MER1_type 2232 2604 0 435 38 0 0 chr17 74417290 74417343 -11021137 + (TG)n Simple_repeat Simple_repeat 2 54 0 323 316 11 0 chr17 74417634 74417729 -11020751 + MIR SINE MIR 151 246 -16 181 243 0 0 chr17 74417698 74417735 -11020745 + L2 LINE L2 3261 3297 -16 * 372 22 0 0 chr17 74417796 74417841 -11020639 + (TG)n Simple_repeat Simple_repeat 2 46 0 553 212 0 10 chr17 74418827 74418926 -11019554 + MER58 DNA MER1_type 1 98 -243 262 108 554 0 chr17 74418939 74419004 -11019476 + MER58 DNA MER1_type 2318 2418 -2 2308 106 0 6 chr17 74421147 74421459 -11017021 + AluSp SINE Alu 4 313 0 438 332 67 31 chr17 74421656 74421879 -11016601 + MIR SINE MIR 13 243 -19 198 118 0 0 chr17 74422474 74422508 -11015972 + (GA)n Simple_repeat Simple_repeat 2 35 0 192 250 30 110 chr17 74422718 74422746 -11015734 - L2 LINE L2 -52 3261 3232 2446 109 43 0 chr17 74422746 74423093 -11015387 - THE1B LTR MaLR 0 364 3 192 250 30 110 chr17 74423093 74423164 -11015316 - L2 LINE L2 -81 3232 3170 225 146 0 0 chr17 74423164 74423212 -11015268 + (TC)n Simple_repeat Simple_repeat 1 48 0 234 91 0 0 chr17 74423231 74423264 -11015216 + (CA)n Simple_repeat Simple_repeat 2 34 0 864 298 34 61 chr17 74423274 74423787 -11014693 - L2 LINE L2 -260 3053 2552 704 300 114 0 chr17 74423768 74424041 -11014439 - L2 LINE L2 -939 2375 2072 * 3068 210 66 80 chr17 74424043 74424239 -11014241 + L1MC3 LINE L1 6012 6209 -1576 228 67 0 0 chr17 74424239 74424269 -11014211 + (TTG)n Simple_repeat Simple_repeat 1 30 0 3068 210 66 80 chr17 74424269 74424351 -11014129 + L1MC3 LINE L1 6209 6291 -1494 1319 126 5 23 chr17 74424351 74424565 -11013915 + L1PA8 LINE L1 5950 6159 -13 208 51 26 26 chr17 74424570 74424609 -11013871 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3068 210 66 80 chr17 74424609 74424981 -11013499 + L1MC3 LINE L1 6295 6654 -1131 396 40 0 0 chr17 74424981 74425031 -11013449 + (TA)n Simple_repeat Simple_repeat 1 50 0 3068 210 66 80 chr17 74425031 74425352 -11013128 + L1MC3 LINE L1 6654 6978 -807 379 266 45 45 chr17 74425770 74425947 -11012533 + L2 LINE L2 1916 2092 -1222 4109 208 90 7 chr17 74425966 74426977 -11011503 - L1MC3 LINE L1 -6 7779 6646 513 203 66 75 chr17 74426973 74427200 -11011280 + L1MA9 LINE L1 6086 6310 -2 * 696 184 43 27 chr17 74427567 74427752 -11010728 - MER53 DNA DNA 0 189 2 1118 135 43 0 chr17 74427952 74428137 -11010343 - L1PA14 LINE L1 -288 5873 5681 1889 109 7 3 chr17 74428137 74428429 -11010051 + L1PA14 LINE L1 5868 6161 0 550 206 63 143 chr17 74428746 74428877 -11009603 + MER20 DNA MER1_type 1 106 -113 4098 57 4 0 chr17 74428877 74429388 -11009092 - L1PA7 LINE L1 0 6154 5642 550 206 63 143 chr17 74429388 74429494 -11008986 + MER20 DNA MER1_type 106 219 0 318 362 68 73 chr17 74431563 74431903 -11006577 + L2 LINE L2 2934 3271 -1 1992 239 42 20 chr17 74434531 74435033 -11003447 + LTR40a LTR ERVL 1 513 -6 5567 58 3 8 chr17 74435344 74436056 -11002424 - L1PA7 LINE L1 0 6154 5447 407 305 68 20 chr17 74437362 74437578 -11000902 + MIR SINE MIR 3 232 -30 2350 87 0 0 chr17 74437611 74437910 -11000570 - AluY SINE Alu -12 299 1 331 241 41 28 chr17 74438109 74438254 -11000226 + (TCTA)n Simple_repeat Simple_repeat 2 148 0 204 97 0 0 chr17 74439494 74439525 -10998955 + (GAGAA)n Simple_repeat Simple_repeat 3 33 0 189 369 136 0 chr17 74439943 74440046 -10998434 - L2 LINE L2 0 3313 3197 339 309 68 12 chr17 74440863 74440950 -10997530 - MLT1J LTR MaLR -2 509 428 865 27 18 0 chr17 74440950 74441062 -10997418 + (CA)n Simple_repeat Simple_repeat 2 115 0 339 309 68 12 chr17 74441062 74441136 -10997344 - MLT1J LTR MaLR -83 428 339 1027 260 102 40 chr17 74441144 74441719 -10996761 + MLT1G LTR MaLR 2 585 -4 258 305 12 0 chr17 74441828 74441910 -10996570 - MLT1J LTR MaLR -328 183 101 21 0 0 0 chr17 74442283 74442304 -10996176 + AT_rich Low_complexity Low_complexity 1 21 0 195 100 0 0 chr17 74442895 74442925 -10995555 + (TAA)n Simple_repeat Simple_repeat 1 30 0 426 297 149 5 chr17 74442933 74443128 -10995352 - MIR SINE MIR -2 260 38 1595 189 53 3 chr17 74443234 74443557 -10994923 + MER2 DNA MER2_type 2 340 -5 408 139 0 0 chr17 74443892 74443971 -10994509 + (CA)n Simple_repeat Simple_repeat 1 79 0 3498 15 0 0 chr17 74445246 74445646 -10992834 - L1PA2 LINE L1 -4 6151 5752 1544 11 0 0 chr17 74445646 74445827 -10992653 + L1PA2 LINE L1 5582 5762 -393 328 290 167 19 chr17 74446162 74446324 -10992156 + MER5A DNA MER1_type 2 187 -2 328 261 133 83 chr17 74446868 74447086 -10991394 - MIR SINE MIR -32 230 2 315 342 9 0 chr17 74447280 74447394 -10991086 - MIR3 SINE MIR -9 199 85 228 279 29 15 chr17 74447640 74447708 -10990772 - MLT1J LTR MaLR -206 343 275 48 18 0 0 chr17 74448254 74448309 -10990171 + AT_rich Low_complexity Low_complexity 1 55 0 202 204 41 0 chr17 74448319 74448368 -10990112 + (TA)n Simple_repeat Simple_repeat 2 52 0 537 209 14 14 chr17 74449399 74449538 -10988942 + L1MB8 LINE L1 6039 6177 -1 2422 184 4 7 chr17 74450029 74450481 -10987999 + MER66A LTR ERV1 28 478 0 1857 131 72 31 chr17 74450690 74451050 -10987430 - THE1C LTR MaLR 0 375 1 186 43 0 0 chr17 74451761 74451784 -10986696 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 439 214 80 50 chr17 74451878 74452116 -10986364 + L1MC5 LINE L1 7651 7895 -66 1987 159 13 0 chr17 74452122 74452423 -10986057 - AluJo SINE Alu -2 310 6 2270 140 52 26 chr17 74452584 74453005 -10985475 - MSTB1 LTR MaLR 0 432 1 614 243 28 44 chr17 74453017 74453198 -10985282 + MER45A DNA AcHobo 1 178 0 1800 241 46 35 chr17 74453239 74453778 -10984702 + MER77 LTR ERV1 55 599 -6 290 299 51 34 chr17 74453797 74453914 -10984566 + LTR33 LTR ERVL 95 213 -308 22 0 0 0 chr17 74454311 74454333 -10984147 + AT_rich Low_complexity Low_complexity 1 22 0 305 148 19 0 chr17 74455042 74455096 -10983384 - U7 snRNA snRNA -1 62 8 347 314 0 0 chr17 74456822 74456943 -10981537 + HAL1 LINE L1 781 901 -1606 655 222 39 7 chr17 74457067 74457220 -10981260 + MER5A DNA MER1_type 30 187 -2 250 262 57 14 chr17 74457250 74457391 -10981089 + HAL1 LINE L1 2170 2316 -191 419 291 47 34 chr17 74457393 74457541 -10980939 - L2 LINE L2 0 3313 3164 363 331 23 0 chr17 74457643 74457776 -10980704 - L2 LINE L2 -475 2839 2704 468 302 29 0 chr17 74457790 74457929 -10980551 + MLT1G LTR MaLR 2 144 -451 714 171 17 23 chr17 74457978 74458468 -10980012 + CT-rich Low_complexity Low_complexity 1 486 0 937 188 52 48 chr17 74458584 74458834 -10979646 + MLT1G LTR MaLR 340 590 0 455 250 188 0 chr17 74458879 74459007 -10979473 + MER5A DNA MER1_type 28 179 -10 2618 203 91 38 chr17 74459019 74459473 -10979007 - L1ME3 LINE L1 -2 6160 5731 237 108 0 0 chr17 74459473 74459510 -10978970 + (TG)n Simple_repeat Simple_repeat 1 37 0 2618 203 91 38 chr17 74459510 74459917 -10978563 - L1ME3 LINE L1 -431 5731 5254 835 226 70 95 chr17 74459932 74460466 -10978014 + MLT1E LTR MaLR 1 616 -8 372 186 138 0 chr17 74460482 74460625 -10977855 - L1P3 LINE L1 -665 5489 5325 447 163 0 0 chr17 74460627 74460707 -10977773 + (TA)n Simple_repeat Simple_repeat 1 80 0 2180 122 3 0 chr17 74460707 74461003 -10977477 - AluSx SINE Alu -15 297 1 323 248 28 64 chr17 74461007 74461116 -10977364 - L1M4 LINE L1 -825 5321 5217 379 80 0 0 chr17 74461116 74461166 -10977314 + U6 snRNA snRNA 2 51 -56 933 171 16 0 chr17 74461167 74461354 -10977126 + L1PA6 LINE L1 6 195 -6668 12510 188 34 36 chr17 74461357 74464850 -10973630 + L1PA6 LINE L1 634 4131 -2736 2114 132 3 3 chr17 74464850 74465146 -10973334 + AluSq SINE Alu 1 296 -17 12510 188 34 36 chr17 74465146 74466029 -10972451 + L1PA6 LINE L1 4131 5014 -1853 315 0 0 0 chr17 74466029 74466064 -10972416 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 12510 188 34 36 chr17 74466064 74467404 -10971076 + L1PA6 LINE L1 5014 6502 -365 1886 74 0 0 chr17 74467405 74467649 -10970831 + L1PA6 LINE L1 6627 6870 0 351 0 0 0 chr17 74467656 74467695 -10970785 + (TA)n Simple_repeat Simple_repeat 2 40 0 2407 78 67 6 chr17 74467695 74468042 -10970438 + L1PB1 LINE L1 5774 6151 0 469 130 0 0 chr17 74468053 74468122 -10970358 + U6 snRNA snRNA 33 101 -6 26 0 0 0 chr17 74468122 74468148 -10970332 + AT_rich Low_complexity Low_complexity 1 26 0 266 197 0 16 chr17 74468148 74468209 -10970271 - L1M4 LINE L1 -919 5227 5168 583 274 117 36 chr17 74468241 74468464 -10970016 - L2 LINE L2 -659 2655 2415 201 348 169 0 chr17 74468686 74468775 -10969705 + MIR SINE MIR 31 134 -74 23 33 0 0 chr17 74468817 74468847 -10969633 + AT_rich Low_complexity Low_complexity 1 30 0 315 262 194 16 chr17 74469440 74469631 -10968849 + MIR SINE MIR 30 254 -8 873 221 43 66 chr17 74469653 74469956 -10968524 - L1MB7 LINE L1 -56 6128 5833 804 206 46 32 chr17 74472145 74472364 -10966116 - MER58A DNA MER1_type -2 222 1 428 314 86 11 chr17 74473665 74474028 -10964452 - L2 LINE L2 -4 3309 2838 1028 249 72 14 chr17 74474114 74474459 -10964021 + MLT1A1 LTR MaLR 1 365 0 217 288 0 0 chr17 74474495 74474575 -10963905 + (TA)n Simple_repeat Simple_repeat 2 81 0 213 65 0 0 chr17 74474577 74474608 -10963872 + (TC)n Simple_repeat Simple_repeat 1 31 0 208 151 57 0 chr17 74474655 74474708 -10963772 + (TA)n Simple_repeat Simple_repeat 1 56 0 2491 43 0 7 chr17 74474776 74475075 -10963405 - AluY SINE Alu -14 297 1 4305 196 4 27 chr17 74475814 74476742 -10961738 - L1MC1 LINE L1 -1 6332 5426 969 313 148 34 chr17 74477045 74477822 -10960658 + L2 LINE L2 1827 2692 -622 1811 181 0 22 chr17 74478628 74478943 -10959537 + AluJo SINE Alu 1 308 -4 735 325 89 20 chr17 74479005 74479581 -10958899 + L2 LINE L2 2691 3312 -1 2207 121 3 0 chr17 74479605 74479902 -10958578 - AluSx SINE Alu -14 298 1 401 189 0 63 chr17 74479962 74480057 -10958423 + MLT1B LTR MaLR 1 89 -301 942 179 6 142 chr17 74480274 74480599 -10957881 + MLT1B LTR MaLR 104 384 -6 2915 173 88 87 chr17 74480625 74480649 -10957831 - MER21B LTR ERV1 -18 845 823 2801 175 16 61 chr17 74480649 74481290 -10957190 + LTR9 LTR ERV1 1 612 0 2915 173 88 87 chr17 74481290 74481636 -10956844 - MER21B LTR ERV1 -40 823 479 2042 103 3 73 chr17 74481636 74481965 -10956515 + AluSx SINE Alu 1 306 -6 2915 173 88 87 chr17 74481965 74482437 -10956043 - MER21B LTR ERV1 -384 479 1 3169 156 27 13 chr17 74482651 74483253 -10955227 - L1MB3 LINE L1 -4 6179 5570 262 260 10 83 chr17 74483394 74483490 -10954990 - MIR SINE MIR -166 96 8 2294 97 0 7 chr17 74483783 74484081 -10954399 - AluSg SINE Alu -14 296 1 1407 136 82 11 chr17 74484097 74484376 -10954104 - L1MA7 LINE L1 -10 6281 5983 22 35 0 0 chr17 74486746 74486775 -10951705 + AT_rich Low_complexity Low_complexity 1 29 0 228 312 156 11 chr17 74487806 74487992 -10950488 + L3 LINE CR1 244 456 -1121 1966 86 5 109 chr17 74489675 74489924 -10948556 + L1MA4A LINE L1 5940 6135 -168 1680 172 69 0 chr17 74489924 74490214 -10948266 + AluJb SINE Alu 1 310 -2 1966 86 5 109 chr17 74490214 74490358 -10948122 + L1MA4A LINE L1 6135 6292 -11 222 378 11 0 chr17 74491583 74491673 -10946807 + MIR3 SINE MIR 83 173 -35 1886 148 0 3 chr17 74492603 74492887 -10945593 + AluJo SINE Alu 1 283 -29 324 0 0 0 chr17 74492887 74492923 -10945557 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 57 0 0 chr17 74494765 74494800 -10943680 + AT_rich Low_complexity Low_complexity 1 35 0 234 62 0 0 chr17 74494942 74494974 -10943506 + (TG)n Simple_repeat Simple_repeat 1 32 0 186 167 0 0 chr17 74495224 74495260 -10943220 + T-rich Low_complexity Low_complexity 1 36 0 1053 96 17 11 chr17 74495677 74495855 -10942625 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1589 158 7 77 chr17 74495861 74496158 -10942322 - AluSx SINE Alu -36 276 1 423 358 0 7 chr17 74496930 74497067 -10941413 + MIR SINE MIR 9 139 -69 319 268 0 12 chr17 74497123 74497205 -10941275 + ERVL LTR ERVL 3764 3844 -1920 990 96 0 0 chr17 74497224 74497349 -10941131 + AluSq/x SINE Alu 1 125 -188 190 244 0 0 chr17 74497366 74497411 -10941069 + MIR SINE MIR 164 208 -54 2273 84 7 14 chr17 74497539 74497836 -10940644 - AluSp SINE Alu -18 295 1 3935 98 4 4 chr17 74498069 74498623 -10939857 + MER41A LTR ERV1 1 554 0 1241 339 71 43 chr17 74498892 74499016 -10939464 + ERVL LTR ERVL 3741 3860 -1904 2159 123 13 0 chr17 74499016 74499318 -10939162 + AluSq SINE Alu 1 306 -7 1241 339 71 43 chr17 74499318 74500439 -10938041 + ERVL LTR ERVL 3860 5020 -744 405 0 0 0 chr17 74500564 74500609 -10937871 + (CA)n Simple_repeat Simple_repeat 2 46 0 188 167 0 37 chr17 74500997 74501051 -10937429 + GA-rich Low_complexity Low_complexity 3 54 0 287 348 29 14 chr17 74501311 74501521 -10936959 - MLT1K LTR MaLR -10 578 366 1585 166 33 108 chr17 74501980 74502408 -10936072 + MSTD LTR MaLR 1 396 0 4303 267 67 39 chr17 74502411 74503839 -10934641 + MSTD-int LTR MaLR 3 1469 -266 2404 93 0 3 chr17 74503839 74504149 -10934331 + AluY SINE Alu 1 309 -2 692 171 0 0 chr17 74504151 74504262 -10934218 + AluJb SINE Alu 184 294 -18 1495 289 80 16 chr17 74504435 74504988 -10933492 + L2 LINE L2 2059 2646 -668 579 309 32 67 chr17 74505000 74505314 -10933166 + L2 LINE L2 3011 3313 0 326 306 75 44 chr17 74505575 74505735 -10932745 + MIR SINE MIR 28 192 -70 1997 128 0 40 chr17 74506052 74506349 -10932131 - AluSx SINE Alu -27 285 1 2038 149 3 6 chr17 74506650 74506998 -10931482 + MER47A DNA MER2_type 20 366 0 191 305 178 34 chr17 74506998 74507116 -10931364 - MIR SINE MIR -108 154 20 654 260 46 10 chr17 74508551 74508747 -10929733 - MIR SINE MIR -1 261 59 423 52 0 0 chr17 74508798 74508856 -10929624 + (ATG)n Simple_repeat Simple_repeat 3 60 0 1965 109 10 27 chr17 74509452 74509745 -10928735 + AluSc SINE Alu 1 288 -21 234 311 54 68 chr17 74510049 74510197 -10928283 + L2 LINE L2 2946 3091 -181 188 404 73 0 chr17 74510996 74511105 -10927375 - L2 LINE L2 0 3313 3197 204 97 0 0 chr17 74511245 74511276 -10927204 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 184 250 36 18 chr17 74511575 74511631 -10926849 - L2 LINE L2 -541 2773 2717 2245 98 0 14 chr17 74511892 74512187 -10926293 - AluSx SINE Alu -21 291 1 189 0 0 0 chr17 74512631 74512652 -10925828 + (GAAA)n Simple_repeat Simple_repeat 4 24 0 1814 167 37 0 chr17 74512770 74513069 -10925411 + AluJo SINE Alu 1 310 -2 236 215 63 89 chr17 74513130 74513209 -10925271 + MIR SINE MIR 114 190 -72 3547 224 84 11 chr17 74513958 74515081 -10923399 - Charlie1a DNA MER1_type 0 1455 251 467 251 151 17 chr17 74515078 74515257 -10923223 - Charlie1a DNA MER1_type -1252 203 1 * 254 306 82 90 chr17 74518348 74518750 -10919730 - L2 LINE L2 -86 3227 2829 206 289 60 36 chr17 74519475 74519558 -10918922 - L2 LINE L2 -16 3256 3172 796 235 23 32 chr17 74520192 74520413 -10918067 + MER20 DNA MER1_type 1 219 0 2023 105 3 41 chr17 74521282 74521606 -10916874 - AluSq SINE Alu 0 315 3 997 120 0 0 chr17 74522328 74522470 -10916010 + AluSg/x SINE Alu 164 305 -7 2409 68 0 0 chr17 74522736 74523046 -10915434 - L1PA8 LINE L1 -2 6170 5861 2396 98 0 0 chr17 74524142 74524449 -10914031 - AluSc SINE Alu -2 307 1 2639 52 0 0 chr17 74525244 74525554 -10912926 - AluY SINE Alu -1 310 1 42 0 0 0 chr17 74526926 74526968 -10911512 + AT_rich Low_complexity Low_complexity 1 42 0 1811 148 24 7 chr17 74526968 74527259 -10911221 - AluSx SINE Alu -16 296 1 607 260 13 19 chr17 74528227 74528381 -10910099 - MIR SINE MIR -2 260 108 232 61 0 0 chr17 74529558 74529591 -10908889 + MADE1 DNA Mariner 47 79 -1 275 315 74 37 chr17 74529622 74529784 -10908696 - MIR SINE MIR -30 232 65 2085 151 0 3 chr17 74530132 74530443 -10908037 + AluSx SINE Alu 3 312 0 2183 108 13 7 chr17 74531267 74531574 -10906906 + AluSg SINE Alu 1 309 -1 641 316 65 8 chr17 74533713 74533960 -10904520 + MIR SINE MIR 1 261 -1 192 224 0 153 chr17 74534026 74534111 -10904369 + L2 LINE L2 2746 2817 -497 238 313 239 0 chr17 74534688 74534822 -10903658 + MIR3 SINE MIR 37 202 -6 306 0 0 0 chr17 74535218 74535252 -10903228 + (CA)n Simple_repeat Simple_repeat 2 35 0 2158 118 3 3 chr17 74535632 74535929 -10902551 + AluSc SINE Alu 1 297 -12 723 290 60 60 chr17 74536172 74536506 -10901974 + L2 LINE L2 2980 3313 0 423 0 0 0 chr17 74537058 74537105 -10901375 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 195 42 0 0 chr17 74537187 74537211 -10901269 + (TG)n Simple_repeat Simple_repeat 2 25 0 299 291 128 28 chr17 74538569 74538748 -10899732 - MARNA DNA Mariner -9 577 381 358 277 0 0 chr17 74538805 74538899 -10899581 - MARNA DNA Mariner -314 272 179 1834 138 81 35 chr17 74539109 74539457 -10899023 - THE1B LTR MaLR 0 364 1 1641 218 87 41 chr17 74539661 74540120 -10898360 + MLT2B1 LTR ERVL 1 480 -40 419 130 13 0 chr17 74540121 74540198 -10898282 + (TA)n Simple_repeat Simple_repeat 1 78 0 296 100 0 40 chr17 74540203 74540253 -10898227 + MLT2C2 LTR ERVL 417 464 0 360 0 0 0 chr17 74541665 74541705 -10896775 + (TG)n Simple_repeat Simple_repeat 1 40 0 297 191 143 184 chr17 74541752 74541799 -10896681 + MER5A DNA MER1_type 29 76 -113 2069 81 21 51 chr17 74541799 74542133 -10896347 + L1PA13 LINE L1 5829 6152 -11 297 191 143 184 chr17 74542133 74542253 -10896227 + MER5A DNA MER1_type 76 189 0 216 0 0 0 chr17 74542366 74542390 -10896090 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2134 109 0 20 chr17 74542686 74542988 -10895492 + AluSc SINE Alu 1 296 -13 431 18 18 0 chr17 74543232 74543288 -10895192 + (TG)n Simple_repeat Simple_repeat 2 58 0 371 113 14 0 chr17 74543288 74543359 -10895121 + (TA)n Simple_repeat Simple_repeat 2 73 0 351 319 0 8 chr17 74543909 74544028 -10894452 + LTR33 LTR ERVL 1 118 -403 1644 123 209 0 chr17 74545787 74546089 -10892391 - MER47A DNA MER2_type 0 366 2 234 81 0 0 chr17 74546450 74546487 -10891993 + (A)n Simple_repeat Simple_repeat 1 37 0 27 0 0 0 chr17 74547113 74547140 -10891340 + AT_rich Low_complexity Low_complexity 1 27 0 647 35 0 11 chr17 74547147 74547234 -10891246 - L1MA1 LINE L1 -4 6298 6213 292 293 238 14 chr17 74548281 74548428 -10890052 - MER5A DNA MER1_type -1 188 9 334 343 71 21 chr17 74548712 74548852 -10889628 - L2 LINE L2 -8 3264 3118 227 309 93 7 chr17 74548968 74549107 -10889373 - MARNA DNA Mariner -348 238 88 439 268 80 0 chr17 74549365 74549477 -10889003 + MER94 DNA DNA 3 123 -11 3181 73 7 0 chr17 74551121 74551534 -10886946 - L1PA8 LINE L1 -13 6159 5744 820 80 0 0 chr17 74551534 74551646 -10886834 + L1P LINE L1 5166 5277 -869 403 143 60 6 chr17 74551821 74551989 -10886491 + (TA)n Simple_repeat Simple_repeat 2 178 0 240 143 0 0 chr17 74552369 74552411 -10886069 + (CA)n Simple_repeat Simple_repeat 2 43 0 481 215 192 0 chr17 74552714 74552844 -10885636 - MER5A DNA MER1_type -6 183 29 193 29 29 29 chr17 74553069 74553104 -10885376 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2119 195 22 5 chr17 74553507 74553923 -10884557 + MLT2C2 LTR ERVL 1 423 -41 255 141 22 0 chr17 74553954 74554005 -10884475 + MLT2C1 LTR ERVL 360 396 -1 246 62 0 0 chr17 74554731 74554763 -10883717 + (TG)n Simple_repeat Simple_repeat 1 32 0 323 23 23 0 chr17 74554766 74554810 -10883670 + (TA)n Simple_repeat Simple_repeat 2 46 0 250 108 0 0 chr17 74555682 74555719 -10882761 + MER53 DNA DNA 1 37 -152 243 0 0 0 chr17 74556299 74556326 -10882154 + (T)n Simple_repeat Simple_repeat 1 27 0 211 0 0 81 chr17 74557143 74557180 -10881300 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 377 284 28 0 chr17 74558802 74558911 -10879569 - MIR SINE MIR -1 261 150 35 24 0 0 chr17 74559245 74559287 -10879193 + AT_rich Low_complexity Low_complexity 1 42 0 2214 110 7 7 chr17 74559322 74559632 -10878848 - AluSq SINE Alu -3 310 1 255 378 56 22 chr17 74559896 74560076 -10878404 - MIR SINE MIR -55 207 22 241 239 66 108 chr17 74560362 74560529 -10877951 - MLT1J LTR MaLR -52 459 300 334 281 36 29 chr17 74560689 74560828 -10877652 - MLT1J LTR MaLR -371 140 1 252 100 0 0 chr17 74562453 74562493 -10875987 + (A)n Simple_repeat Simple_repeat 1 40 0 324 337 174 23 chr17 74564162 74564426 -10874054 + L1MEd LINE L1 158 461 -5658 213 211 0 0 chr17 74564647 74564685 -10873795 + GA-rich Low_complexity Low_complexity 4 41 0 886 45 0 0 chr17 74564698 74564808 -10873672 + L1PA6 LINE L1 6043 6152 -2 249 233 82 0 chr17 74564889 74564962 -10873518 + L1MEd LINE L1 1161 1239 -4880 25 65 0 0 chr17 74565210 74565256 -10873224 + AT_rich Low_complexity Low_complexity 1 46 0 469 277 35 7 chr17 74567976 74568117 -10870363 + MER5A DNA MER1_type 21 165 -24 233 300 0 14 chr17 74568256 74568326 -10870154 + L1MC4a LINE L1 5584 5652 -2156 573 286 91 13 chr17 74568348 74568656 -10869824 + L1MC4a LINE L1 5712 6043 -1765 24 0 0 0 chr17 74568743 74568767 -10869713 + AT_rich Low_complexity Low_complexity 1 24 0 192 125 0 0 chr17 74570249 74570281 -10868199 + (CAA)n Simple_repeat Simple_repeat 2 33 0 368 291 42 36 chr17 74570287 74570452 -10868028 - MIR3 SINE MIR -11 197 32 1936 154 3 0 chr17 74571460 74571752 -10866728 - AluSx SINE Alu -16 296 4 202 237 0 0 chr17 74572245 74572283 -10866197 + L3 LINE CR1 1532 1569 -8 218 387 0 0 chr17 74572647 74572722 -10865758 - L3 LINE CR1 -11 1566 1492 423 0 0 0 chr17 74576185 74576232 -10862248 + (TG)n Simple_repeat Simple_repeat 2 48 0 456 261 62 56 chr17 74579137 74579311 -10859169 - L1M2 LINE L1 -635 5531 5379 2542 68 0 0 chr17 74579311 74579621 -10858859 - AluY SINE Alu -1 310 1 456 261 62 56 chr17 74579621 74579721 -10858759 - L1M2 LINE L1 -787 5379 5281 195 129 0 0 chr17 74579937 74579968 -10858512 + (TTG)n Simple_repeat Simple_repeat 3 33 0 488 299 89 56 chr17 74580299 74580874 -10857606 - L1M4 LINE L1 -2382 3764 3171 220 289 26 13 chr17 74580890 74580966 -10857514 + MIR SINE MIR 186 262 0 463 288 93 83 chr17 74580979 74581701 -10856779 - L1M4 LINE L1 -2983 3163 2435 2186 131 0 0 chr17 74581740 74582046 -10856434 - AluSg SINE Alu -4 306 1 232 139 0 0 chr17 74582668 74582711 -10855769 - MADE1 DNA Mariner -36 44 2 24 0 0 0 chr17 74582961 74582985 -10855495 + AT_rich Low_complexity Low_complexity 1 24 0 661 239 17 50 chr17 74583463 74583643 -10854837 + MER63A DNA MER1_type 35 208 -2 215 290 40 65 chr17 74583963 74584087 -10854393 + L2 LINE L2 2492 2612 -702 1143 217 41 3 chr17 74584087 74584382 -10854098 + MER33 DNA MER1_type 1 306 -18 371 326 95 70 chr17 74584417 74584860 -10853620 + L2 LINE L2 2616 3065 -248 24 53 0 0 chr17 74585129 74585167 -10853313 + AT_rich Low_complexity Low_complexity 1 38 0 351 127 0 0 chr17 74585430 74585493 -10852987 + (CA)n Simple_repeat Simple_repeat 1 63 0 2116 157 41 70 chr17 74587404 74587845 -10850635 + MSTA LTR MaLR 1 428 0 1830 161 31 10 chr17 74587980 74588272 -10850208 + AluJb SINE Alu 2 299 -13 1835 215 121 13 chr17 74588572 74589028 -10849452 + MLT1D LTR MaLR 1 505 0 969 324 92 35 chr17 74589519 74590359 -10848121 - HAL1 LINE L1 -1602 905 18 1833 90 16 0 chr17 74590578 74590833 -10847647 - L1PA8 LINE L1 -2 6170 5912 2354 95 0 3 chr17 74590843 74591149 -10847331 - AluSq SINE Alu -8 305 1 201 74 0 0 chr17 74592677 74592704 -10845776 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1487 46 0 0 chr17 74593146 74593320 -10845160 - AluY SINE Alu -9 302 129 746 65 0 0 chr17 74593321 74593413 -10845067 + AluY SINE Alu 42 133 -178 320 309 123 38 chr17 74593507 74593743 -10844737 - MIR SINE MIR 0 262 7 21 0 0 0 chr17 74594340 74594361 -10844119 + AT_rich Low_complexity Low_complexity 1 21 0 219 259 74 56 chr17 74594373 74594481 -10843999 - L3 LINE CR1 -1125 452 343 1733 175 3 10 chr17 74594544 74594847 -10843633 - AluJo SINE Alu -8 304 4 228 184 0 0 chr17 74595346 74595395 -10843085 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 714 164 5 92 chr17 74595453 74595648 -10842832 - MER20 DNA MER1_type 0 219 42 2264 111 0 0 chr17 74595779 74596086 -10842394 + AluSg SINE Alu 1 307 -3 2370 86 3 0 chr17 74596228 74596530 -10841950 - AluY SINE Alu -8 303 1 231 342 72 13 chr17 74597792 74597944 -10840536 - MIR SINE MIR -49 213 53 308 107 67 13 chr17 74598104 74598179 -10840301 + CT-rich Low_complexity Low_complexity 4 82 0 899 132 6 28 chr17 74598273 74598455 -10840025 + (TTTTC)n Simple_repeat Simple_repeat 3 180 0 1613 195 19 7 chr17 74598464 74598772 -10839708 - AluJb SINE Alu 0 312 1 377 245 119 95 chr17 74598922 74599133 -10839347 - MIR SINE MIR 0 262 39 205 333 73 68 chr17 74599909 74600143 -10838337 + MIR SINE MIR 23 257 -5 186 71 0 0 chr17 74600443 74600471 -10838009 + (CAA)n Simple_repeat Simple_repeat 2 29 0 849 214 7 0 chr17 74600472 74600653 -10837827 + AluJb SINE Alu 136 317 0 2149 113 3 0 chr17 74601057 74601357 -10837123 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr17 74602038 74602059 -10836421 + AT_rich Low_complexity Low_complexity 1 21 0 191 376 59 47 chr17 74602309 74602479 -10836001 - L3 LINE CR1 -113 1464 1293 189 0 0 0 chr17 74602730 74602751 -10835729 + (CA)n Simple_repeat Simple_repeat 1 21 0 2366 92 0 0 chr17 74604501 74604794 -10833686 - AluSg SINE Alu -17 293 1 1922 136 37 0 chr17 74605264 74605587 -10832893 - L1MC1 LINE L1 -5 6328 5994 239 311 239 0 chr17 74605739 74605919 -10832561 + MIR SINE MIR 40 262 0 61 15 0 0 chr17 74606467 74606535 -10831945 + AT_rich Low_complexity Low_complexity 1 68 0 243 0 0 0 chr17 74606535 74606568 -10831912 + (TG)n Simple_repeat Simple_repeat 1 60 0 243 0 0 0 chr17 74606568 74606595 -10831885 + (TG)n Simple_repeat Simple_repeat 2 28 0 768 202 0 0 chr17 74606617 74606746 -10831734 - AluJb SINE Alu -55 257 129 3984 83 13 0 chr17 74607000 74607545 -10830935 - L1PA10 LINE L1 -5 6163 5612 2027 126 0 24 chr17 74607588 74607882 -10830598 + AluSg SINE Alu 1 287 -23 23 54 0 0 chr17 74608493 74608530 -10829950 + AT_rich Low_complexity Low_complexity 1 37 0 798 204 107 15 chr17 74608714 74608910 -10829570 + MER20 DNA MER1_type 1 214 -5 186 361 34 25 chr17 74609543 74609662 -10828818 - MER5A DNA MER1_type -57 132 13 509 250 11 71 chr17 74609662 74609813 -10828667 - MIR SINE MIR -87 175 17 2351 99 0 0 chr17 74609813 74610116 -10828364 - AluSg SINE Alu -7 303 1 2246 104 7 0 chr17 74610120 74610417 -10828063 - AluSq SINE Alu -14 299 1 509 250 11 71 chr17 74610417 74610444 -10828036 - MIR SINE MIR -248 14 3 180 0 0 0 chr17 74611624 74611644 -10826836 + (T)n Simple_repeat Simple_repeat 1 20 0 1001 332 39 18 chr17 74612395 74612997 -10825483 + MER115 DNA AcHobo 3 685 -8 265 341 55 28 chr17 74613110 74613292 -10825188 + MER20B DNA MER1_type 3 189 -594 9978 127 35 17 chr17 74613503 74615055 -10823425 + THE1C-int LTR MaLR 1 1580 0 2010 146 50 22 chr17 74615057 74615420 -10823060 + THE1C LTR MaLR 3 375 0 510 299 62 16 chr17 74616336 74616530 -10821950 - MIR SINE MIR -10 252 50 843 156 23 0 chr17 74616812 74616940 -10821540 - FLAM_C SINE Alu -12 131 1 1968 123 0 11 chr17 74617135 74617419 -10821061 + AluSc SINE Alu 1 281 -28 333 41 0 0 chr17 74617419 74617468 -10821012 + L1PA4 LINE L1 6107 6155 0 203 264 55 22 chr17 74623058 74623149 -10815331 + MIR SINE MIR 43 136 -72 504 304 48 12 chr17 74624555 74624723 -10813757 - MIR3 SINE MIR -1 207 34 21 0 0 0 chr17 74625539 74625560 -10812920 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 74625691 74625714 -10812766 + AT_rich Low_complexity Low_complexity 1 23 0 975 177 5 11 chr17 74625970 74626156 -10812324 - MER20 DNA MER1_type 0 219 35 1830 197 46 84 chr17 74626168 74626692 -10811788 + MLT2B2 LTR ERVL 1 504 -11 263 155 0 39 chr17 74627240 74627343 -10811137 + (CTA)n Simple_repeat Simple_repeat 1 99 0 2138 129 0 16 chr17 74627662 74627979 -10810501 + AluSx SINE Alu 1 312 0 491 327 23 28 chr17 74628138 74628355 -10810125 + MIR SINE MIR 3 218 -44 468 0 0 0 chr17 74628363 74628415 -10810065 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2158 96 0 0 chr17 74628418 74628698 -10809782 - AluSc SINE Alu -29 280 1 29 0 0 0 chr17 74630685 74630714 -10807766 + AT_rich Low_complexity Low_complexity 1 29 0 180 111 0 0 chr17 74630888 74630915 -10807565 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 353 316 41 51 chr17 74631880 74632076 -10806404 - MIR SINE MIR -62 200 7 23 33 0 0 chr17 74632487 74632517 -10805963 + AT_rich Low_complexity Low_complexity 1 30 0 231 241 24 0 chr17 74633446 74633529 -10804951 + (TA)n Simple_repeat Simple_repeat 1 85 0 744 177 82 6 chr17 74633909 74634067 -10804413 - MER45A DNA AcHobo -8 170 1 186 43 0 0 chr17 74634071 74634094 -10804386 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 1659 127 8 4 chr17 74634246 74634505 -10803975 + THE1B LTR MaLR 105 364 0 342 338 114 22 chr17 74634873 74635190 -10803290 - MLT1J2 LTR MaLR -46 404 59 2180 137 0 3 chr17 74635216 74635522 -10802958 - AluSx SINE Alu -7 305 1 247 301 26 35 chr17 74635793 74635906 -10802574 - MLT1L LTR MaLR -416 199 88 213 299 0 46 chr17 74636073 74636160 -10802320 + L2 LINE L2 3186 3268 -4 2300 101 3 0 chr17 74636186 74636493 -10801987 + AluSg SINE Alu 1 308 -2 345 162 0 0 chr17 74637383 74637451 -10801029 + GA-rich Low_complexity Low_complexity 1 68 0 2087 134 47 33 chr17 74638803 74639162 -10799318 + THE1B LTR MaLR 1 364 0 760 246 40 18 chr17 74639298 74639575 -10798905 + L1MD3 LINE L1 7712 7994 -1 388 284 119 36 chr17 74640945 74641139 -10797341 + MIR SINE MIR 3 212 -50 1027 285 95 28 chr17 74641247 74641945 -10796535 - L2 LINE L2 -73 3240 2492 2062 140 45 22 chr17 74642210 74642566 -10795914 + THE1B LTR MaLR 1 364 0 583 259 21 64 chr17 74642566 74642802 -10795678 - MIR SINE MIR -36 226 1 39527 33 39 4 chr17 74644443 74650384 -10788096 + L1PA3 LINE L1 1 6155 0 382 323 138 44 chr17 74650598 74650960 -10787520 - L2 LINE L2 -61 3252 2857 679 267 205 18 chr17 74651210 74651644 -10786836 + L1ME3A LINE L1 5642 6156 -14 744 224 99 15 chr17 74651784 74651835 -10786645 - MER20 DNA MER1_type -1 218 173 243 61 0 0 chr17 74651835 74651868 -10786612 + (TGG)n Simple_repeat Simple_repeat 1 33 0 744 224 99 15 chr17 74651868 74652017 -10786463 - MER20 DNA MER1_type -46 173 1 765 265 45 33 chr17 74652026 74652271 -10786209 - MIR SINE MIR 0 262 15 2747 141 0 9 chr17 74652821 74653253 -10785227 + MSTA LTR MaLR 1 428 0 205 191 0 24 chr17 74653598 74653640 -10784840 + GA-rich Low_complexity Low_complexity 2 42 0 212 224 17 17 chr17 74653703 74653761 -10784719 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 415 279 0 0 chr17 74654216 74654302 -10784178 + MER5A DNA MER1_type 2 87 -102 1615 203 67 3 chr17 74654465 74654825 -10783655 - MSTD LTR MaLR -13 383 1 1194 201 59 0 chr17 74654825 74655079 -10783401 - MSTD-int LTR MaLR 0 1735 1467 237 208 0 0 chr17 74655079 74655127 -10783353 - FLAM_C SINE Alu 0 179 132 802 149 0 15 chr17 74655127 74655261 -10783219 - AluJo/FLAM SINE Alu -170 132 1 608 208 57 0 chr17 74655489 74655648 -10782832 + L1M3 LINE L1 5568 5735 -445 * 5421 148 39 11 chr17 74655646 74657037 -10781443 + L1MA8 LINE L1 4865 6288 -3 213 283 6 12 chr17 74657248 74657414 -10781066 + (TA)n Simple_repeat Simple_repeat 1 165 0 588 239 60 0 chr17 74657439 74657657 -10780823 - L1MC4 LINE L1 -132 7910 7680 336 24 0 0 chr17 74658500 74658541 -10779939 + (CA)n Simple_repeat Simple_repeat 2 42 0 552 56 0 0 chr17 74658588 74658660 -10779820 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 199 262 10 10 chr17 74658993 74659096 -10779384 + (TA)n Simple_repeat Simple_repeat 2 104 0 252 122 0 0 chr17 74659646 74659687 -10778793 + (TG)n Simple_repeat Simple_repeat 2 42 0 263 309 151 69 chr17 74659797 74660189 -10778291 + L2 LINE L2 2825 3248 -65 1829 151 3 17 chr17 74660278 74660570 -10777910 - AluJo SINE Alu 0 312 25 940 304 80 15 chr17 74660577 74661037 -10777443 + LTR33 LTR ERVL 29 518 -3 1770 157 16 44 chr17 74661358 74661676 -10776804 - AluJo SINE Alu -1 311 3 286 304 135 20 chr17 74661806 74661954 -10776526 + MIR SINE MIR 92 256 -6 216 387 75 0 chr17 74663199 74663292 -10775188 + L2 LINE L2 3149 3248 -24 200 83 0 28 chr17 74663331 74663367 -10775113 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 1881 143 27 3 chr17 74663748 74664041 -10774439 + AluSx SINE Alu 1 300 -12 194 320 89 94 chr17 74664121 74664299 -10774181 + L2 LINE L2 2502 2679 -635 1536 191 64 0 chr17 74664299 74664581 -10773899 - AluJb SINE Alu -12 300 1 194 320 89 94 chr17 74664581 74664796 -10773684 + L2 LINE L2 2679 2893 -421 * 649 220 75 35 chr17 74664792 74664965 -10773515 - MER5A DNA MER1_type -7 182 3 978 265 44 49 chr17 74666073 74666484 -10771996 + LTR16C LTR ERVL 77 485 -6 2246 116 0 0 chr17 74666745 74667048 -10771432 + AluSx SINE Alu 1 303 -9 274 229 0 0 chr17 74667847 74667895 -10770585 + L2 LINE L2 3252 3299 -14 3775 70 8 0 chr17 74670475 74670963 -10767517 - L1PA7 LINE L1 -3 6151 5660 1995 148 3 22 chr17 74671332 74671649 -10766831 - AluSx SINE Alu -1 311 1 181 377 31 25 chr17 74672337 74672496 -10765984 - L2 LINE L2 -831 2483 2324 22 0 0 0 chr17 74673905 74673927 -10764553 + AT_rich Low_complexity Low_complexity 1 22 0 786 250 15 10 chr17 74674664 74674864 -10763616 - MER58A DNA MER1_type -23 201 1 2300 101 0 3 chr17 74675613 74675920 -10762560 - AluSc SINE Alu -3 306 1 25 51 0 0 chr17 74675938 74675977 -10762503 + AT_rich Low_complexity Low_complexity 1 39 0 2636 65 0 9 chr17 74677030 74677371 -10761109 + L1PA6 LINE L1 5812 6149 -5 2228 127 0 0 chr17 74677937 74678244 -10760236 - AluSg SINE Alu -3 307 1 1124 232 48 71 chr17 74678352 74678748 -10759732 - MLT1B LTR MaLR 0 390 4 554 188 0 31 chr17 74679039 74679199 -10759281 + GA-rich Low_complexity Low_complexity 3 157 0 4613 133 57 18 chr17 74679308 74680146 -10758334 + L1PA16 LINE L1 5292 6162 -4 793 288 72 47 chr17 74680364 74680624 -10757856 + L1ME1 LINE L1 377 629 -5632 2124 136 3 0 chr17 74680624 74680925 -10757555 - AluSx SINE Alu -10 302 1 793 288 72 47 chr17 74680925 74682399 -10756081 + L1ME1 LINE L1 629 2157 -4104 * 1679 237 48 39 chr17 74682389 74682475 -10756005 + L1ME1 LINE L1 5448 5532 -568 2222 131 0 3 chr17 74682475 74682789 -10755691 + AluSq SINE Alu 1 313 0 1679 237 48 39 chr17 74682789 74683344 -10755136 + L1ME1 LINE L1 5532 6095 -5 198 71 0 0 chr17 74683390 74683418 -10755062 + (TG)n Simple_repeat Simple_repeat 1 28 0 180 77 0 0 chr17 74684262 74684288 -10754192 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 553 332 52 8 chr17 74685058 74685326 -10753154 - LTR33 LTR ERVL -230 291 12 258 294 22 0 chr17 74685641 74685733 -10752747 + GA-rich Low_complexity Low_complexity 1 94 0 197 381 8 40 chr17 74685970 74686096 -10752384 + L2 LINE L2 2203 2324 -990 300 313 9 35 chr17 74686484 74686599 -10751881 + L2 LINE L2 3200 3311 -2 281 333 20 20 chr17 74687896 74687995 -10750485 - MER5A DNA MER1_type -22 167 69 207 284 73 46 chr17 74687900 74688009 -10750471 + MER5B DNA MER1_type 27 138 -40 * 25 31 0 0 chr17 74688081 74688113 -10750367 + AT_rich Low_complexity Low_complexity 1 32 0 1148 37 0 0 chr17 74688796 74688932 -10749548 + AluY SINE Alu 158 293 -18 238 143 18 0 chr17 74689089 74689145 -10749335 + AluSp/q SINE Alu 247 303 0 2391 68 13 7 chr17 74689253 74689561 -10748919 + AluY SINE Alu 1 310 -1 477 50 0 0 chr17 74689573 74689633 -10748847 + (TTTC)n Simple_repeat Simple_repeat 1 60 0 333 402 61 4 chr17 74690642 74690871 -10747609 + L3 LINE CR1 427 668 -909 288 261 0 0 chr17 74690899 74690991 -10747489 + (CATA)n Simple_repeat Simple_repeat 3 94 0 276 319 81 27 chr17 74691014 74691199 -10747281 + L3 LINE CR1 680 874 -703 269 318 122 27 chr17 74691190 74691338 -10747142 + MIR3 SINE MIR 16 177 -31 * 466 293 47 21 chr17 74691384 74691592 -10746888 + MIR SINE MIR 19 234 -28 521 366 33 39 chr17 74691792 74692275 -10746205 + L3 LINE CR1 1096 1575 -2 1386 271 104 20 chr17 74692970 74693518 -10744962 + MLT1E LTR MaLR 1 593 0 1116 264 3 48 chr17 74693754 74694129 -10744351 - MLT2C1 LTR ERVL -2 395 38 206 339 0 0 chr17 74694822 74694878 -10743602 - L2 LINE L2 -18 3295 3240 276 197 68 51 chr17 74695102 74695219 -10743261 + L1MDa LINE L1 2032 2150 -4390 25 31 0 0 chr17 74695704 74695736 -10742744 + AT_rich Low_complexity Low_complexity 1 32 0 228 111 0 0 chr17 74696095 74696131 -10742349 + (TC)n Simple_repeat Simple_repeat 1 36 0 1141 160 18 5 chr17 74696526 74696857 -10741623 - MER57A LTR ERV1 -3 400 1 327 113 0 0 chr17 74696952 74697005 -10741475 + (CA)n Simple_repeat Simple_repeat 1 53 0 2017 151 0 7 chr17 74697041 74697340 -10741140 - AluSx SINE Alu -15 297 1 1946 103 0 4 chr17 74697528 74697781 -10740699 - AluSg SINE Alu -58 252 1 22 35 0 0 chr17 74697781 74697810 -10740670 + AT_rich Low_complexity Low_complexity 1 29 0 434 73 97 18 chr17 74698151 74698316 -10740164 + (TA)n Simple_repeat Simple_repeat 1 178 0 259 66 105 0 chr17 74698336 74698412 -10740068 + (TA)n Simple_repeat Simple_repeat 2 85 0 225 237 34 0 chr17 74698552 74698611 -10739869 + MLT1C LTR MaLR 407 467 0 244 292 0 14 chr17 74698727 74698799 -10739681 + L2 LINE L2 3193 3263 -50 2029 132 59 34 chr17 74700178 74700533 -10737947 - THE1B LTR MaLR 0 364 1 833 250 18 23 chr17 74700937 74701157 -10737323 - MER20 DNA MER1_type 0 219 1 436 280 132 48 chr17 74701321 74701510 -10736970 + MIR SINE MIR 58 262 0 1759 160 0 33 chr17 74701717 74702023 -10736457 + AluJb SINE Alu 1 296 -16 201 338 0 14 chr17 74703695 74703766 -10734714 + L2 LINE L2 2988 3057 -215 2181 177 62 2 chr17 74703808 74704210 -10734270 - MSTB LTR MaLR 0 426 1 803 258 41 0 chr17 74704725 74704919 -10733561 - MIR SINE MIR -44 218 17 461 193 30 7 chr17 74707638 74707773 -10730707 + GA-rich Low_complexity Low_complexity 1 138 0 2442 89 0 6 chr17 74708766 74709079 -10729401 + AluSx SINE Alu 1 311 -1 365 229 115 76 chr17 74709182 74709339 -10729141 - MIR SINE MIR -61 201 39 1949 140 26 14 chr17 74709620 74709971 -10728509 - THE1C LTR MaLR -20 355 1 209 323 62 0 chr17 74710793 74710858 -10727622 + MIR SINE MIR 30 98 -110 281 291 20 20 chr17 74711499 74711647 -10726833 - MLT1K LTR MaLR -43 545 398 2287 78 0 0 chr17 74711789 74712105 -10726375 - AluY SINE Alu 0 316 1 808 247 5 0 chr17 74712439 74712633 -10725847 - MER3 DNA MER1_type -8 201 7 275 283 332 11 chr17 74713041 74713228 -10725252 + MIR SINE MIR 6 252 -10 1570 152 24 91 chr17 74713254 74713584 -10724896 + AluJb SINE Alu 4 311 -1 2137 162 28 14 chr17 74713780 74714139 -10724341 - THE1B LTR MaLR 0 364 1 659 303 101 47 chr17 74714224 74714700 -10723780 - L2 LINE L2 -75 3238 2742 951 246 27 17 chr17 74717448 74717749 -10720731 + L1MB7 LINE L1 5879 6182 -2 1551 244 17 17 chr17 74719738 74720144 -10718336 - MLT2D LTR ERVL -8 406 1 202 298 53 32 chr17 74721801 74721895 -10716585 - MIR SINE MIR -79 183 88 411 143 55 22 chr17 74721974 74722065 -10716415 + MER53 DNA DNA 2 95 -94 1947 115 26 4 chr17 74722616 74722886 -10715594 + AluSc SINE Alu 1 276 -33 22 0 0 0 chr17 74723130 74723152 -10715328 + AT_rich Low_complexity Low_complexity 1 22 0 381 75 0 0 chr17 74724277 74724330 -10714150 + (TG)n Simple_repeat Simple_repeat 2 54 0 399 92 13 26 chr17 74724359 74724435 -10714045 + (TA)n Simple_repeat Simple_repeat 2 76 0 290 254 14 14 chr17 74726884 74726955 -10711525 - MIR SINE MIR -115 147 77 465 34 0 0 chr17 74727087 74727146 -10711334 + (CA)n Simple_repeat Simple_repeat 2 60 0 1925 234 37 18 chr17 74727546 74728119 -10710361 - L1ME3A LINE L1 -5 6165 5582 2171 170 57 0 chr17 74728120 74728508 -10709972 + MSTB LTR MaLR 2 411 -15 355 266 16 54 chr17 74728515 74728590 -10709890 - L1ME3A LINE L1 -576 5590 5514 1999 124 52 0 chr17 74728590 74728881 -10709599 + AluSq SINE Alu 1 306 -7 355 266 16 54 chr17 74728881 74728989 -10709491 - L1ME3A LINE L1 -652 5514 5414 415 254 0 14 chr17 74729108 74729284 -10709196 - MER20 DNA MER1_type -8 211 1 815 51 5 9 chr17 74729481 74729600 -10708880 + L1PA3 LINE L1 6016 6155 0 387 0 0 0 chr17 74729884 74729927 -10708553 + (TG)n Simple_repeat Simple_repeat 2 44 0 2426 69 0 28 chr17 74730010 74730328 -10708152 + AluY SINE Alu 1 309 -2 495 262 61 24 chr17 74730370 74730534 -10707946 + MIR SINE MIR 28 197 -65 263 356 33 0 chr17 74730545 74730668 -10707812 - MIR SINE MIR -78 130 48 1610 127 106 7 chr17 74732130 74732405 -10706075 + AluSx SINE Alu 1 302 -10 370 303 82 0 chr17 74732696 74732818 -10705662 + MER5B DNA MER1_type 1 132 -46 21 0 0 0 chr17 74732940 74732961 -10705519 + AT_rich Low_complexity Low_complexity 1 21 0 2395 78 3 0 chr17 74733280 74733575 -10704905 - AluY SINE Alu -15 296 1 333 242 0 0 chr17 74733854 74733945 -10704535 + A-rich Low_complexity Low_complexity 1 91 0 773 232 11 11 chr17 74734138 74734319 -10704161 + MLT1B LTR MaLR 210 390 0 2353 137 37 5 chr17 74734394 74734825 -10703655 - LTR56 LTR ERV1 0 445 1 1326 177 83 178 chr17 74734889 74735676 -10702804 + LTR8A LTR ERV1 1 712 -15 430 266 115 86 chr17 74736119 74736363 -10702117 - MIR SINE MIR 0 262 12 1553 273 116 10 chr17 74736953 74737848 -10700632 - L1ME3A LINE L1 -6 6164 5039 2322 152 23 5 chr17 74737868 74738264 -10700216 + MER57A LTR ERV1 1 403 0 561 312 151 23 chr17 74738284 74738682 -10699798 - L1ME3A LINE L1 -1222 4924 4476 1618 108 31 8 chr17 74738684 74738942 -10699538 + L1PA13 LINE L1 5899 6162 -1 349 191 48 29 chr17 74739004 74739109 -10699371 - L1ME3A LINE L1 -1649 4497 4391 246 283 0 0 chr17 74939959 74940019 -10498461 + CT-rich Low_complexity Low_complexity 1 60 0 305 200 105 9 chr17 74940085 74940190 -10498290 + MLT1J2 LTR MaLR 306 420 -30 2128 145 8 125 chr17 74940507 74940996 -10497484 - MSTB1 LTR MaLR 0 432 1 235 133 40 27 chr17 74941822 74941897 -10496583 + A-rich Low_complexity Low_complexity 3 78 0 23 0 0 0 chr17 74942401 74942424 -10496056 + AT_rich Low_complexity Low_complexity 1 23 0 696 237 48 83 chr17 74942594 74942822 -10495658 - MIR SINE MIR -15 247 28 14490 213 23 11 chr17 74943804 74947512 -10490968 - L1PA16 LINE L1 0 6817 2988 2668 42 0 0 chr17 74947512 74947818 -10490662 - AluY SINE Alu -5 306 1 14490 213 23 11 chr17 74947818 74949606 -10488874 - L1PA16 LINE L1 -3829 2988 1223 2179 289 15 33 chr17 74949837 74950567 -10487913 - L1PA16 LINE L1 -6060 727 11 413 209 73 9 chr17 74950871 74950981 -10487499 + MER94 DNA DNA 2 118 -16 1561 147 170 11 chr17 74951087 74951434 -10487046 + MSTB LTR MaLR 1 402 -24 29 28 0 0 chr17 74951434 74951470 -10487010 + AT_rich Low_complexity Low_complexity 1 36 0 232 175 53 0 chr17 74951488 74951545 -10486935 - MSTA LTR MaLR -51 377 318 226 83 0 28 chr17 74951542 74951578 -10486902 + MSTB LTR MaLR 389 423 -3 * 1730 220 73 36 chr17 74951917 74952412 -10486068 + MLT2B1 LTR ERVL 1 513 -7 22 35 0 0 chr17 74953587 74953616 -10484864 + AT_rich Low_complexity Low_complexity 1 29 0 298 351 81 70 chr17 74954112 74954371 -10484109 - L2 LINE L2 -12 3260 2999 218 330 57 19 chr17 74954588 74954694 -10483786 + MIR3 SINE MIR 13 122 -86 182 321 99 0 chr17 74955287 74955368 -10483112 - MIR SINE MIR -6 256 168 298 308 57 92 chr17 74955401 74955628 -10482852 - MIR SINE MIR -16 246 28 25 0 0 0 chr17 74956150 74956175 -10482305 + AT_rich Low_complexity Low_complexity 1 25 0 272 327 161 12 chr17 74956261 74956429 -10482051 - MIR SINE MIR -11 251 59 312 272 59 21 chr17 74957598 74957730 -10480750 - MIR SINE MIR -95 167 22 2205 111 19 10 chr17 74959047 74959354 -10479126 - AluSx SINE Alu 0 312 3 364 267 32 49 chr17 74959526 74959719 -10478761 + MIR SINE MIR 36 230 -32 460 355 42 9 chr17 74960606 74960823 -10477657 + MIR SINE MIR 32 255 -7 2596 121 0 3 chr17 74961140 74961505 -10476975 - THE1B LTR MaLR 0 364 1 201 281 0 0 chr17 74961509 74961605 -10476875 + CT-rich Low_complexity Low_complexity 12 107 0 596 250 199 53 chr17 74961641 74962201 -10476279 - L2 LINE L2 -8 3305 2686 232 259 12 47 chr17 74962371 74962456 -10476024 + CT-rich Low_complexity Low_complexity 5 86 0 2341 110 16 46 chr17 74962490 74962863 -10475617 + THE1B LTR MaLR 1 362 -2 479 305 115 22 chr17 74963224 74963450 -10475030 - MIR SINE MIR -13 249 3 230 89 44 0 chr17 74964228 74964273 -10474207 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 314 311 0 0 chr17 74964281 74964371 -10474109 - L1MC4 LINE L1 -1339 6703 6614 1548 207 10 94 chr17 74964400 74964888 -10473592 - MLT2B1 LTR ERVL -73 447 1 1692 146 4 43 chr17 74966485 74966787 -10471693 - AluJo SINE Alu 0 307 17 213 65 0 0 chr17 74966886 74966917 -10471563 + (TG)n Simple_repeat Simple_repeat 1 31 0 389 315 178 5 chr17 74967649 74967862 -10470618 + MIR SINE MIR 12 261 -1 334 282 29 10 chr17 74967888 74967991 -10470489 - MIR SINE MIR -71 191 87 2430 76 0 0 chr17 74968283 74968584 -10469896 + AluY SINE Alu 1 301 -10 852 279 92 55 chr17 74968621 74969022 -10469458 + L2 LINE L2 2898 3313 0 2432 81 0 0 chr17 74969090 74969385 -10469095 - AluSc SINE Alu -12 297 3 2204 144 55 36 chr17 74969558 74969974 -10468506 + MSTA LTR MaLR 1 424 -4 1261 85 30 50 chr17 74971502 74971702 -10466778 - MER107 DNA MER1_type -1 196 1 2106 126 0 19 chr17 74971822 74972139 -10466341 - AluSx SINE Alu -1 311 1 293 279 118 53 chr17 74972563 74972783 -10465697 + MIR SINE MIR 18 262 0 1618 151 43 33 chr17 74973150 74973449 -10465031 + THE1B LTR MaLR 1 302 -62 357 189 11 11 chr17 74973450 74973630 -10464850 + (TA)n Simple_repeat Simple_repeat 1 180 0 30 27 0 0 chr17 74973631 74973668 -10464812 + AT_rich Low_complexity Low_complexity 1 37 0 320 214 6 0 chr17 74973673 74973846 -10464634 + (TA)n Simple_repeat Simple_repeat 2 175 0 42 0 0 0 chr17 74973846 74973888 -10464592 + AT_rich Low_complexity Low_complexity 1 42 0 306 303 0 0 chr17 74973895 74973984 -10464496 - L1MC4 LINE L1 -1339 6703 6615 307 148 19 0 chr17 74973993 74974047 -10464433 + THE1B LTR MaLR 310 364 0 213 39 0 0 chr17 74974218 74974244 -10464236 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1921 146 7 0 chr17 74974246 74974526 -10463954 - AluSx SINE Alu -30 282 1 222 333 39 47 chr17 74974593 74974722 -10463758 - MER5B DNA MER1_type -53 136 9 312 174 83 139 chr17 74974955 74975009 -10463471 + MLT2F LTR ERVL 10 65 -598 858 168 10 46 chr17 74975009 74975120 -10463360 + MER53 DNA DNA 1 105 -84 2192 103 7 0 chr17 74975120 74975428 -10463052 - AluSx SINE Alu 0 311 2 858 168 10 46 chr17 74975428 74975511 -10462969 + MER53 DNA DNA 105 189 0 312 174 83 139 chr17 74975511 74975600 -10462880 + MLT2F LTR ERVL 65 145 -518 12735 129 24 55 chr17 74975611 74975950 -10462530 - Tigger1 DNA MER2_type 0 2418 2070 2133 116 6 10 chr17 74975950 74976261 -10462219 - AluSg SINE Alu 0 310 1 12735 129 24 55 chr17 74976261 74976777 -10461703 - Tigger1 DNA MER2_type -348 2070 1539 2085 82 0 11 chr17 74976777 74977056 -10461424 - AluY SINE Alu -1 310 35 12735 129 24 55 chr17 74977056 74978658 -10459822 - Tigger1 DNA MER2_type -879 1539 38 1361 279 25 12 chr17 74978679 74979081 -10459399 + MLT2F LTR ERVL 199 605 -58 207 0 0 0 chr17 74980603 74980626 -10457854 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 29 0 0 0 chr17 74982310 74982339 -10456141 + AT_rich Low_complexity Low_complexity 1 29 0 999 189 18 32 chr17 74982505 74982722 -10455758 + MER20 DNA MER1_type 1 214 -5 189 94 0 0 chr17 74982870 74982902 -10455578 + (TC)n Simple_repeat Simple_repeat 1 32 0 303 28 0 0 chr17 74982902 74982938 -10455542 + (TG)n Simple_repeat Simple_repeat 1 36 0 411 277 91 36 chr17 74983698 74983812 -10454668 - HAL1b LINE L1 -256 1092 986 732 192 72 6 chr17 74983812 74983979 -10454501 + MER5B DNA MER1_type 1 178 0 411 277 91 36 chr17 74983979 74984171 -10454309 - HAL1b LINE L1 -362 986 769 2632 112 0 6 chr17 74984254 74984620 -10453860 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr17 74985169 74985189 -10453291 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2222 144 23 3 chr17 74985330 74985683 -10452797 - THE1B LTR MaLR -4 360 1 260 176 103 15 chr17 74986378 74986446 -10452034 - MLT1J2 LTR MaLR -44 406 333 2098 120 10 17 chr17 74987380 74987680 -10450800 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr17 74988081 74988105 -10450375 + AT_rich Low_complexity Low_complexity 1 24 0 210 37 0 0 chr17 74989162 74989189 -10449291 + (TG)n Simple_repeat Simple_repeat 2 28 0 193 40 0 0 chr17 74989397 74989422 -10449058 + (TTTTG)n Simple_repeat Simple_repeat 2 160 0 1854 171 0 0 chr17 74989422 74989703 -10448777 - AluJo SINE Alu -28 284 4 1894 126 80 0 chr17 74990652 74990938 -10447542 + AluSq SINE Alu 1 309 -4 1424 98 5 0 chr17 74990947 74991152 -10447328 - L1MA3 LINE L1 -462 5843 5638 2207 117 0 16 chr17 74991193 74991502 -10446978 + AluSx SINE Alu 1 304 -8 180 154 31 138 chr17 74991763 74991828 -10446652 + L2 LINE L2 437 494 -2820 790 300 58 21 chr17 74993565 74993995 -10444485 + MLT1L LTR MaLR 166 611 -4 1998 133 106 3 chr17 74994839 74995169 -10443311 + THE1B LTR MaLR 1 364 0 1338 219 13 41 chr17 74996253 74996568 -10441912 + AluJb SINE Alu 3 308 -4 261 333 26 17 chr17 74998146 74998263 -10440217 + MIR SINE MIR 31 148 -114 234 0 0 0 chr17 74998850 74998876 -10439604 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 420 306 162 13 chr17 74999213 74999660 -10438820 + L2 LINE L2 2646 3156 -157 210 137 95 0 chr17 74999660 74999755 -10438725 + (TA)n Simple_repeat Simple_repeat 2 105 0 233 144 79 14 chr17 74999830 74999969 -10438511 + (TA)n Simple_repeat Simple_repeat 2 149 0 295 94 50 67 chr17 75000051 75000231 -10438249 + (TATAA)n Simple_repeat Simple_repeat 3 179 0 1877 175 37 26 chr17 75001860 75002237 -10436243 - MLT1B LTR MaLR 0 390 10 2657 48 0 0 chr17 75002369 75002678 -10435802 - AluY SINE Alu -2 309 1 316 320 76 25 chr17 75002775 75002972 -10435508 + MIR SINE MIR 48 254 -8 180 111 0 0 chr17 75002979 75003006 -10435474 + (TTA)n Simple_repeat Simple_repeat 3 29 0 24 85 0 0 chr17 75003044 75003103 -10435377 + AT_rich Low_complexity Low_complexity 1 59 0 181 275 130 61 chr17 75003367 75003498 -10434982 - MIR SINE MIR -61 201 62 628 132 38 0 chr17 75003628 75003734 -10434746 - AluSg/x SINE Alu -14 296 187 437 264 85 0 chr17 75003748 75003877 -10434603 - MIR SINE MIR -116 146 7 186 71 0 0 chr17 75005478 75005506 -10432974 + (TC)n Simple_repeat Simple_repeat 2 29 0 248 340 107 0 chr17 75005548 75005651 -10432829 + MIR SINE MIR 40 153 -109 975 267 55 87 chr17 75005899 75006053 -10432427 + L1ME LINE L1 3 160 -5910 2310 83 7 0 chr17 75006053 75006343 -10432137 - AluSq SINE Alu -21 292 1 975 267 55 87 chr17 75006343 75006660 -10431820 + L1ME LINE L1 160 459 -5611 267 31 0 0 chr17 75006863 75006895 -10431585 + (CA)n Simple_repeat Simple_repeat 1 32 0 353 267 80 20 chr17 75007042 75007192 -10431288 + L1ME LINE L1 698 815 -5255 269 348 75 6 chr17 75007454 75007615 -10430865 - MIR SINE MIR -14 248 77 453 333 60 26 chr17 75007980 75008214 -10430266 - MIR SINE MIR -2 260 19 292 315 42 21 chr17 75009274 75009417 -10429063 - MIR3 SINE MIR -3 205 60 952 134 30 13 chr17 75009680 75009833 -10428647 + L1MC4 LINE L1 5627 5744 -590 193 56 28 28 chr17 75009833 75009869 -10428611 + (TA)n Simple_repeat Simple_repeat 2 37 0 952 134 30 13 chr17 75009869 75009912 -10428568 + L1MC4 LINE L1 5744 5785 -549 311 326 0 0 chr17 75009937 75010026 -10428454 - L1MC4 LINE L1 -1340 6702 6614 2509 195 29 7 chr17 75010032 75010567 -10427913 + L1MA10 LINE L1 5781 6161 -1 212 356 89 52 chr17 75011828 75012019 -10426461 + L2 LINE L2 2676 2873 -441 255 314 207 0 chr17 75012079 75012219 -10426261 + L2 LINE L2 2879 3047 -225 602 240 70 43 chr17 75012511 75012769 -10425711 + L1MC4 LINE L1 7778 8042 0 288 301 209 13 chr17 75013370 75013523 -10424957 + MIR3 SINE MIR 14 196 -12 2172 118 3 3 chr17 75015217 75015521 -10422959 - AluSx SINE Alu -8 304 1 4033 146 38 5 chr17 75015697 75016026 -10422454 - L1PB3 LINE L1 0 6166 5849 357 24 0 0 chr17 75016026 75016068 -10422412 + (TG)n Simple_repeat Simple_repeat 2 43 0 4033 146 38 5 chr17 75016068 75016785 -10421695 - L1PB3 LINE L1 -317 5849 5057 257 324 108 0 chr17 75017249 75017360 -10421120 + MLT1K LTR MaLR 67 189 -399 183 156 0 0 chr17 75017447 75017479 -10421001 + GA-rich Low_complexity Low_complexity 1 32 0 286 292 70 70 chr17 75017524 75017709 -10420771 + MLT1K LTR MaLR 315 499 -89 427 213 28 19 chr17 75018163 75018223 -10420257 - MER94 DNA DNA -19 115 52 2200 188 8 57 chr17 75018223 75018734 -10419746 - MER66B LTR ERV1 0 486 1 427 213 28 19 chr17 75018734 75018781 -10419699 - MER94 DNA DNA -82 52 7 2182 136 0 0 chr17 75019318 75019627 -10418853 - AluSx SINE Alu 0 312 4 489 327 13 0 chr17 75020403 75020562 -10417918 + MIR SINE MIR 3 163 -99 315 252 48 19 chr17 75020857 75020960 -10417520 - MLT1L LTR MaLR -353 262 157 434 179 11 21 chr17 75021019 75021114 -10417366 + MIR SINE MIR 169 262 0 387 0 0 0 chr17 75023108 75023151 -10415329 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 0 0 0 chr17 75023450 75023474 -10415006 + (TA)n Simple_repeat Simple_repeat 2 25 0 203 326 174 53 chr17 75023786 75024082 -10414398 - L2 LINE L2 -339 2975 2716 772 288 24 0 chr17 75024082 75024287 -10414193 + MER63A DNA MER1_type 1 210 0 203 326 174 53 chr17 75024287 75024739 -10413741 - L2 LINE L2 -598 2716 2137 2048 118 3 3 chr17 75025494 75025782 -10412698 - AluSq SINE Alu -25 288 1 818 247 91 0 chr17 75025803 75026046 -10412434 - L2 LINE L2 -1 3312 3048 967 272 91 3 chr17 75027063 75027361 -10411119 - MER58B DNA MER1_type -14 327 4 440 304 63 5 chr17 75027478 75027663 -10410817 + MIR SINE MIR 53 249 -13 2611 122 36 0 chr17 75028062 75028473 -10410007 - MSTA LTR MaLR -2 426 1 2323 103 0 3 chr17 75028748 75029060 -10409420 + AluSp SINE Alu 1 311 -2 2668 168 16 10 chr17 75029837 75030007 -10408473 + L1MB3 LINE L1 5483 5651 -532 1890 120 50 0 chr17 75030007 75030307 -10408173 + L1PA16 LINE L1 5851 6165 -1 2668 168 16 10 chr17 75030307 75030838 -10407642 + L1MB3 LINE L1 5651 6176 -7 328 139 25 13 chr17 75030855 75030934 -10407546 + GA-rich Low_complexity Low_complexity 1 80 0 230 178 0 22 chr17 75031630 75031675 -10406805 + CT-rich Low_complexity Low_complexity 4 47 0 22 0 0 0 chr17 75031764 75031786 -10406694 + AT_rich Low_complexity Low_complexity 1 22 0 227 315 14 0 chr17 75033108 75033181 -10405299 - MLT1K LTR MaLR -336 252 179 22 0 0 0 chr17 75033498 75033520 -10404960 + AT_rich Low_complexity Low_complexity 1 22 0 2015 132 3 0 chr17 75033521 75033816 -10404664 - AluSq SINE Alu -17 296 1 429 303 17 45 chr17 75033830 75033968 -10404512 + MIR SINE MIR 34 167 -95 1393 210 47 96 chr17 75033968 75034245 -10404235 - MLT1C LTR MaLR 0 467 223 2189 84 44 0 chr17 75034245 75034542 -10403938 - AluY SINE Alu -1 310 1 1393 210 47 96 chr17 75034542 75034755 -10403725 - MLT1C LTR MaLR -244 223 1 429 303 17 45 chr17 75034755 75034794 -10403686 + MIR SINE MIR 167 206 -56 409 254 24 8 chr17 75034871 75034997 -10403483 - L1ME3A LINE L1 -9 6161 6034 * 463 238 7 70 chr17 75034975 75035118 -10403362 - L1ME3A LINE L1 -531 5639 5506 199 297 0 40 chr17 75035524 75035598 -10402882 - MIR SINE MIR -84 124 54 359 232 50 10 chr17 75036612 75036711 -10401769 + MIR SINE MIR 32 134 -128 21 0 0 0 chr17 75037048 75037069 -10401411 + AT_rich Low_complexity Low_complexity 1 21 0 3440 241 65 46 chr17 75037686 75039158 -10399322 - L1M4 LINE L1 -2862 4095 2631 243 0 0 0 chr17 75039158 75039185 -10399295 + (TG)n Simple_repeat Simple_repeat 2 28 0 3440 241 65 46 chr17 75039185 75039348 -10399132 - L1M4 LINE L1 -4326 2631 2473 2156 239 80 85 chr17 75039450 75041021 -10397459 - L1M4 LINE L1 -4479 2480 927 1933 291 67 12 chr17 75041106 75041705 -10396775 - L1M4 LINE L1 -6081 778 147 368 225 12 12 chr17 75041723 75041803 -10396677 - L1M4 LINE L1 -6769 90 11 306 342 86 26 chr17 75042581 75042964 -10395516 - L2 LINE L2 -1120 2194 1789 387 324 92 14 chr17 75043127 75043269 -10395211 + MIR SINE MIR 21 173 -89 1691 48 0 0 chr17 75043346 75043554 -10394926 - L1P3 LINE L1 -397 5775 5568 217 377 71 29 chr17 75043788 75044138 -10394342 - L2 LINE L2 -546 2768 2404 262 207 0 17 chr17 75044853 75044911 -10393569 + (CA)n Simple_repeat Simple_repeat 2 58 0 287 248 128 59 chr17 75045122 75045299 -10393181 - MIR3 SINE MIR -15 193 5 255 318 196 28 chr17 75045768 75045947 -10392533 + MIR SINE MIR 20 228 -34 195 163 0 93 chr17 75046541 75046584 -10391896 + L2 LINE L2 3269 3307 -6 274 116 0 0 chr17 75046614 75046657 -10391823 + MADE1 DNA Mariner 1 43 -37 189 213 0 0 chr17 75046918 75046965 -10391515 + T-rich Low_complexity Low_complexity 1 47 0 2683 181 78 99 chr17 75049361 75049416 -10389064 + L1MB8 LINE L1 5212 5267 -911 1062 132 103 24 chr17 75049416 75049629 -10388851 - MER30 DNA MER1_type 0 230 1 2683 181 78 99 chr17 75049629 75050492 -10387988 + L1MB8 LINE L1 5267 6101 -77 272 214 0 67 chr17 75050541 75050630 -10387850 + L1MB8 LINE L1 6096 6178 0 27 29 0 0 chr17 75050649 75050683 -10387797 + AT_rich Low_complexity Low_complexity 1 34 0 267 348 43 9 chr17 75050973 75051088 -10387392 - MIR3 SINE MIR -32 176 58 4706 67 3 13 chr17 75051736 75052363 -10386117 + L1PA5 LINE L1 5533 6153 -1 2822 10 0 0 chr17 75053214 75053521 -10384959 - AluYa5 SINE Alu -4 307 1 1624 176 17 20 chr17 75053919 75054215 -10384265 + AluJo SINE Alu 1 295 -17 1702 83 5 0 chr17 75054997 75055215 -10383265 - AluY SINE Alu -21 290 72 21 36 0 0 chr17 75055627 75055655 -10382825 + AT_rich Low_complexity Low_complexity 1 28 0 202 118 29 0 chr17 75055906 75055940 -10382540 + (CA)n Simple_repeat Simple_repeat 1 35 0 188 355 45 0 chr17 75056399 75056509 -10381971 - MIR SINE MIR 0 262 148 4588 24 2 4 chr17 75056819 75057362 -10381118 - L1PA2 LINE L1 -1 6154 5613 668 236 48 14 chr17 75058655 75058905 -10379575 - L1ME1 LINE L1 -1 6177 5917 1229 249 42 12 chr17 75058931 75059340 -10379140 - L1M4 LINE L1 -1886 4496 4076 1114 152 46 28 chr17 75059340 75059557 -10378923 + ERVL-B1 LTR ERVL 5540 5760 -4 513 204 0 0 chr17 75059557 75059655 -10378825 + MLT2B1 LTR ERVL 3 100 -420 590 216 0 0 chr17 75059656 75059767 -10378713 - MLT1A1 LTR MaLR -254 111 1 403 310 70 43 chr17 75059938 75060267 -10378213 - L1MEc LINE L1 -4782 1602 1265 253 250 58 0 chr17 75060292 75060396 -10378084 - L1MEc LINE L1 -5224 1339 1230 2104 127 0 0 chr17 75060430 75060729 -10377751 + AluSq SINE Alu 1 299 -14 4029 178 75 68 chr17 75060752 75061324 -10377156 - L1MC3 LINE L1 -25 7760 7120 235 259 0 0 chr17 75061324 75061382 -10377098 - MLT1F1 LTR MaLR -442 125 68 4029 178 75 68 chr17 75061382 75061803 -10376677 - L1MC3 LINE L1 -665 7120 6703 329 200 74 30 chr17 75061805 75061940 -10376540 - L1MEc LINE L1 -5316 1247 1107 2239 71 0 7 chr17 75061941 75062249 -10376231 - AluY SINE Alu 0 306 1 1063 304 34 28 chr17 75062281 75062811 -10375669 - L1MEc LINE L1 -5829 734 202 244 189 40 14 chr17 75062838 75062912 -10375568 - L1ME1 LINE L1 -256 5865 5790 275 269 23 64 chr17 75063254 75063473 -10375007 - L1MEd LINE L1 -4973 1974 1765 237 229 95 29 chr17 75063656 75063761 -10374719 - L1MEd LINE L1 -5426 1433 1322 423 334 125 33 chr17 75063962 75064402 -10374078 + L2 LINE L2 2782 3261 -52 960 197 106 4 chr17 75064402 75064676 -10373804 + MER33 DNA MER1_type 1 302 -22 2033 125 28 0 chr17 75067239 75067528 -10370952 - AluSx SINE Alu -15 297 1 2570 108 3 3 chr17 75068762 75069124 -10369356 + THE1B LTR MaLR 3 364 0 2238 98 3 7 chr17 75069713 75070010 -10368470 - AluSc SINE Alu -13 296 1 26 30 0 0 chr17 75070418 75070451 -10368029 + AT_rich Low_complexity Low_complexity 1 33 0 29 28 0 0 chr17 75071018 75071054 -10367426 + AT_rich Low_complexity Low_complexity 1 36 0 313 305 38 15 chr17 75071061 75071192 -10367288 + L1MC4a LINE L1 5138 5271 -875 481 253 74 21 chr17 75071357 75071547 -10366933 + L1MC4a LINE L1 5706 5905 -1903 412 271 33 0 chr17 75071726 75071848 -10366632 - MER46C DNA MER2_type -136 202 77 756 283 188 3 chr17 75072367 75072696 -10365784 - L2 LINE L2 0 3313 2924 2397 75 0 3 chr17 75072696 75073018 -10365462 + L1PB1 LINE L1 5460 5780 -371 599 74 37 0 chr17 75073128 75073209 -10365271 - L1PB1 LINE L1 -286 5865 5782 420 73 73 26 chr17 75073209 75073360 -10365120 + (TA)n Simple_repeat Simple_repeat 1 158 0 38 61 0 0 chr17 75073361 75073427 -10365053 + AT_rich Low_complexity Low_complexity 1 66 0 405 95 74 7 chr17 75073427 75073575 -10364905 + (TA)n Simple_repeat Simple_repeat 1 158 0 2566 99 8 0 chr17 75073575 75073939 -10364541 + L1PB1 LINE L1 5785 6151 0 1454 314 159 21 chr17 75073943 75075003 -10363477 - L2 LINE L2 -375 2939 1733 23 33 0 0 chr17 75075063 75075093 -10363387 + AT_rich Low_complexity Low_complexity 1 30 0 2096 117 0 7 chr17 75075374 75075664 -10362816 - AluSx SINE Alu -16 296 9 21 0 0 0 chr17 75075966 75075987 -10362493 + AT_rich Low_complexity Low_complexity 1 21 0 1009 296 70 17 chr17 75077330 75077745 -10360735 + LTR16A LTR ERVL 1 437 -13 223 344 88 16 chr17 75078081 75078206 -10360274 + MER5A DNA MER1_type 50 183 -6 1660 204 0 3 chr17 75079606 75079915 -10358565 - AluJo SINE Alu -2 310 3 827 206 101 0 chr17 75080601 75080790 -10357690 - MER3 DNA MER1_type 0 209 2 411 189 242 8 chr17 75081286 75081418 -10357062 - L1MA10 LINE L1 -3 6331 6169 2241 105 0 0 chr17 75081674 75081968 -10356512 + AluSx SINE Alu 1 294 -18 1604 148 48 26 chr17 75082759 75083030 -10355450 + AluJb SINE Alu 1 277 -35 816 278 107 27 chr17 75083044 75083382 -10355098 - MER83B LTR ERV1 -13 365 1 272 348 0 57 chr17 75083404 75083545 -10354935 - MER5A DNA MER1_type -50 139 7 378 42 0 0 chr17 75083615 75083663 -10354817 + (TG)n Simple_repeat Simple_repeat 1 48 0 198 361 32 51 chr17 75083936 75084094 -10354386 + L3b LINE CR1 1403 1557 -26 237 83 0 0 chr17 75084363 75084399 -10354081 + (TG)n Simple_repeat Simple_repeat 2 37 0 527 267 72 24 chr17 75084712 75084990 -10353490 + MIR SINE MIR 1 262 0 384 119 0 0 chr17 75085837 75085896 -10352584 + (TA)n Simple_repeat Simple_repeat 2 60 0 180 0 0 0 chr17 75085895 75085915 -10352565 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 3232 281 77 27 chr17 75086101 75087858 -10350622 - L1M4 LINE L1 -1827 4319 2475 277 242 145 110 chr17 75088381 75088608 -10349872 + MIR SINE MIR 20 254 -8 21 57 0 0 chr17 75090760 75090795 -10347685 + AT_rich Low_complexity Low_complexity 1 35 0 533 321 91 33 chr17 75091545 75091875 -10346605 - MLT1J2 LTR MaLR -40 410 62 543 220 0 25 chr17 75091882 75092000 -10346480 + MER63 DNA MER1_type 5 745 -317 309 329 161 0 chr17 75092345 75092494 -10345986 - MIR SINE MIR 0 262 90 228 122 0 0 chr17 75092890 75092931 -10345549 + (ATG)n Simple_repeat Simple_repeat 2 42 0 1683 130 0 0 chr17 75093623 75093875 -10344605 + AluSg SINE Alu 54 305 0 1855 130 0 83 chr17 75094379 75094717 -10343763 + AluSx SINE Alu 1 310 -2 371 301 36 0 chr17 75095423 75095506 -10342974 + MER58A DNA MER1_type 1 86 -21 * 558 269 27 43 chr17 75095504 75095690 -10342790 + MER58A DNA MER1_type 42 224 0 207 114 0 0 chr17 75096226 75096261 -10342219 + (GA)n Simple_repeat Simple_repeat 1 35 0 2458 53 0 20 chr17 75096303 75096607 -10341873 - AluY SINE Alu -11 300 3 350 344 113 16 chr17 75097253 75097564 -10340916 + L3 LINE CR1 116 456 -1121 22 56 0 0 chr17 75097946 75097982 -10340498 + AT_rich Low_complexity Low_complexity 1 36 0 426 290 147 56 chr17 75100156 75100660 -10337820 - L1MEd LINE L1 -4891 1228 679 243 0 0 0 chr17 75101261 75101288 -10337192 + (T)n Simple_repeat Simple_repeat 1 27 0 368 246 8 75 chr17 75102174 75102308 -10336172 - MIR SINE MIR -25 237 113 3312 51 26 0 chr17 75102879 75103309 -10335171 + L1PA3 LINE L1 5712 6152 -3 1581 184 3 35 chr17 75103377 75103666 -10334814 + AluJo SINE Alu 1 281 -31 180 0 0 0 chr17 75103666 75103686 -10334794 + (CTCG)n Simple_repeat Simple_repeat 2 21 0 1581 184 3 35 chr17 75103686 75103712 -10334768 + AluJo SINE Alu 281 306 -6 1359 154 47 29 chr17 75103900 75104205 -10334275 + THE1C LTR MaLR 3 347 -28 1249 102 22 249 chr17 75104225 75104626 -10333854 - AluSx SINE Alu -2 310 1 283 95 10 43 chr17 75104626 75104671 -10333809 + MSTA LTR MaLR 308 428 0 778 237 35 23 chr17 75105024 75105197 -10333283 - MER5A DNA MER1_type -9 180 6 1839 174 0 16 chr17 75105368 75105673 -10332807 - AluJb SINE Alu -11 301 2 230 319 96 0 chr17 75105720 75105814 -10332666 + L2 LINE L2 2669 2771 -543 1490 221 127 79 chr17 75105908 75106414 -10332066 - MLT1H LTR MaLR -19 530 1 437 289 46 20 chr17 75106424 75106621 -10331859 - MLT1L LTR MaLR -46 569 368 407 299 156 37 chr17 75106753 75107127 -10331353 - MLT1L LTR MaLR -14 601 110 1843 168 7 3 chr17 75108755 75109053 -10329427 - AluSx SINE Alu -13 299 1 24 0 0 0 chr17 75109445 75109469 -10329011 + AT_rich Low_complexity Low_complexity 1 24 0 587 74 0 0 chr17 75109616 75109697 -10328783 - L1PA5 LINE L1 -1 6153 6073 537 71 0 0 chr17 75109698 75109768 -10328712 + L1PA6 LINE L1 5876 5945 -209 23449 148 9 28 chr17 75110683 75116003 -10322477 - L1PA10 LINE L1 -5 6163 952 573 56 93 0 chr17 75116015 75116177 -10322303 + (TA)n Simple_repeat Simple_repeat 2 178 0 29 28 0 0 chr17 75116177 75116213 -10322267 + AT_rich Low_complexity Low_complexity 1 36 0 1441 290 97 31 chr17 75116637 75117950 -10320530 - HAL1 LINE L1 -109 2398 894 769 271 126 98 chr17 75118042 75118687 -10319793 - HAL1 LINE L1 -1782 725 63 1357 307 12 21 chr17 75118757 75119187 -10319293 - LTR16B LTR ERVL -4 460 35 1125 238 65 31 chr17 75119296 75119649 -10318831 - MLT1A1 LTR MaLR 0 365 1 357 292 139 38 chr17 75119878 75120087 -10318393 + L2 LINE L2 2589 2818 -496 2268 123 85 15 chr17 75121058 75121456 -10317024 + MSTA LTR MaLR 1 426 -2 465 222 122 44 chr17 75121521 75121701 -10316779 - MER58C DNA MER1_type -1 214 21 255 266 124 35 chr17 75122176 75122228 -10316252 + MER63 DNA MER1_type 1 47 -1015 2080 139 0 3 chr17 75122228 75122523 -10315957 + AluJb SINE Alu 2 295 -17 255 266 124 35 chr17 75122523 75122583 -10315897 + MER63 DNA MER1_type 47 749 -313 225 241 17 0 chr17 75122586 75122644 -10315836 + MER63 DNA MER1_type 977 1035 -25 861 202 60 11 chr17 75122824 75123007 -10315473 + MER58C DNA MER1_type 9 200 -15 304 236 34 0 chr17 75123166 75123255 -10315225 + L1MA9 LINE L1 6181 6272 -40 1180 254 28 0 chr17 75123438 75123761 -10314719 + L1ME1 LINE L1 5586 5917 -247 874 277 57 7 chr17 75123763 75124045 -10314435 - MER58B DNA MER1_type -16 325 30 818 245 25 5 chr17 75124086 75124290 -10314190 + L1ME1 LINE L1 5954 6161 -5 270 0 0 0 chr17 75124455 75124485 -10313995 + (T)n Simple_repeat Simple_repeat 1 30 0 327 292 97 56 chr17 75124768 75124984 -10313496 - MIR SINE MIR -1 261 37 180 77 0 0 chr17 75125029 75125055 -10313425 + (CAA)n Simple_repeat Simple_repeat 2 27 0 733 113 0 0 chr17 75125349 75125455 -10313025 - L1MB5 LINE L1 -8 6166 6061 3169 239 87 39 chr17 75128205 75129487 -10308993 - L1ME1 LINE L1 -14 6221 4792 2212 124 30 19 chr17 75129487 75129858 -10308622 + THE1C LTR MaLR 1 375 0 3169 239 87 39 chr17 75129858 75130826 -10307654 - L1ME1 LINE L1 -1443 4792 3872 719 256 106 9 chr17 75130856 75131083 -10307397 - MLT1G LTR MaLR 0 590 342 387 304 82 31 chr17 75131148 75131342 -10307138 - MLT1G LTR MaLR -389 206 3 895 251 23 27 chr17 75131346 75131645 -10306835 - L1ME1 LINE L1 -2605 3610 3313 233 316 0 0 chr17 75131645 75131702 -10306778 + polypyrimidine Low_complexity Low_complexity 3 59 0 620 272 43 26 chr17 75131738 75132084 -10306396 - L1ME1 LINE L1 -2937 3278 2927 873 285 71 76 chr17 75132116 75132677 -10305803 - L1ME1 LINE L1 -5456 940 377 1628 203 68 11 chr17 75132677 75133031 -10305449 - MLT1A2 LTR MaLR 0 374 1 873 285 71 76 chr17 75133031 75133328 -10305152 - L1ME1 LINE L1 -6019 377 85 1429 199 46 49 chr17 75133328 75133694 -10304786 - MLT1A1 LTR MaLR 0 365 1 873 285 71 76 chr17 75133694 75133725 -10304755 - L1ME1 LINE L1 -6311 85 55 200 125 0 25 chr17 75134089 75134129 -10304351 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2019 149 3 0 chr17 75134582 75134884 -10303596 - AluJb SINE Alu -1 311 9 1895 180 138 48 chr17 75134993 75135348 -10303132 - MLT1D LTR MaLR -1 504 96 2140 133 0 0 chr17 75135348 75135641 -10302839 - AluSx SINE Alu -17 295 3 1895 180 138 48 chr17 75135641 75135747 -10302733 - MLT1D LTR MaLR -409 96 1 1764 205 8 11 chr17 75135799 75136165 -10302315 + MLT1A1 LTR MaLR 1 365 0 1963 128 3 16 chr17 75136217 75136521 -10301959 + AluSx SINE Alu 13 312 0 22 0 0 0 chr17 75139024 75139046 -10299434 + AT_rich Low_complexity Low_complexity 1 22 0 1903 128 20 51 chr17 75139359 75139712 -10298768 - THE1B LTR MaLR -20 344 3 11244 94 14 25 chr17 75139714 75140459 -10298021 - THE1B-int LTR MaLR 0 1580 828 24 32 0 0 chr17 75140459 75140490 -10297990 + AT_rich Low_complexity Low_complexity 1 31 0 2104 24 0 12 chr17 75140468 75140722 -10297758 - L1PA3 LINE L1 0 6155 5905 11244 94 14 25 chr17 75140490 75141565 -10296915 - THE1B-int LTR MaLR -752 828 1 1988 129 27 51 chr17 75141565 75141938 -10296542 - THE1B LTR MaLR 0 364 1 231 239 0 0 chr17 75142078 75142145 -10296335 + CT-rich Low_complexity Low_complexity 2 68 0 401 287 78 12 chr17 75142151 75142318 -10296162 - MIR SINE MIR -25 237 60 229 324 49 39 chr17 75142379 75142481 -10295999 - L2 LINE L2 0 3313 3211 229 125 36 0 chr17 75145213 75145269 -10293211 + (CA)n Simple_repeat Simple_repeat 2 59 0 3083 128 0 6 chr17 75146470 75146947 -10291533 - L1PA16 LINE L1 0 6166 5693 272 253 95 21 chr17 75147073 75147168 -10291312 + MLT1I LTR MaLR 308 409 0 1094 127 0 18 chr17 75148719 75148884 -10289596 - L1PA16 LINE L1 -24 6142 5981 1158 79 0 5 chr17 75148910 75149125 -10289355 + (TA)n Simple_repeat Simple_repeat 1 215 0 360 242 0 22 chr17 75149129 75149220 -10289260 + L1MC4 LINE L1 6614 6702 -1340 897 142 0 0 chr17 75149221 75149520 -10288960 + (TA)n Simple_repeat Simple_repeat 1 299 0 271 264 66 0 chr17 75149521 75149627 -10288853 + L1MC4 LINE L1 6614 6726 -1316 276 155 0 0 chr17 75149636 75149707 -10288773 + (TA)n Simple_repeat Simple_repeat 2 72 0 351 289 0 0 chr17 75149707 75149797 -10288683 - L1MC4 LINE L1 -1339 6703 6614 966 103 0 0 chr17 75149810 75150075 -10288405 + (TA)n Simple_repeat Simple_repeat 1 265 0 180 0 0 0 chr17 75150076 75150096 -10288384 + (GA)n Simple_repeat Simple_repeat 1 20 0 1925 124 11 0 chr17 75150098 75150372 -10288108 - AluSq SINE Alu -36 277 1 2248 76 3 13 chr17 75150943 75151244 -10287236 + AluY SINE Alu 5 302 -9 321 221 92 39 chr17 75151696 75151848 -10286632 + L1M4 LINE L1 4204 4362 -1784 558 302 150 20 chr17 75151891 75152657 -10285823 + L1M4 LINE L1 4495 5360 -786 2044 124 3 0 chr17 75152737 75153019 -10285461 + AluSq SINE Alu 11 293 -20 389 215 43 0 chr17 75153257 75153350 -10285130 - MLT1E2 LTR MaLR 0 626 530 413 263 18 9 chr17 75153353 75153467 -10285013 - MLT1D LTR MaLR -390 115 1 2449 112 17 6 chr17 75154697 75155055 -10283425 + THE1B LTR MaLR 3 364 0 184 294 106 35 chr17 75155222 75155307 -10283173 - MIR SINE MIR -100 108 18 282 269 23 47 chr17 75156785 75156956 -10281524 + A-rich Low_complexity Low_complexity 3 169 0 1741 172 0 23 chr17 75158036 75158384 -10280096 - AluSx SINE Alu 0 312 1 991 247 87 36 chr17 75158386 75158778 -10279702 - L1MC4 LINE L1 0 8042 7631 353 361 63 13 chr17 75161019 75161177 -10277303 - MIR SINE MIR -77 185 20 1443 241 47 22 chr17 75163089 75163454 -10275026 + MLT1A2 LTR MaLR 1 374 0 234 0 0 0 chr17 75163761 75163787 -10274693 + (T)n Simple_repeat Simple_repeat 1 26 0 958 55 8 8 chr17 75163911 75164039 -10274441 + L1PA7 LINE L1 6026 6153 -1 1842 138 54 43 chr17 75168150 75168521 -10269959 + THE1C LTR MaLR 1 375 0 29 28 0 0 chr17 75169310 75169346 -10269134 + AT_rich Low_complexity Low_complexity 1 36 0 431 252 29 14 chr17 75169597 75169736 -10268744 - L1ME LINE L1 -458 5663 5523 388 350 173 29 chr17 75169756 75170202 -10268278 + L2 LINE L2 2804 3313 0 1163 230 11 11 chr17 75170439 75170722 -10267758 - L1PB4 LINE L1 -1 6155 5873 301 333 25 8 chr17 75170972 75171092 -10267388 - L1ME LINE L1 -2432 5376 5255 23 0 0 0 chr17 75172911 75172934 -10265546 + AT_rich Low_complexity Low_complexity 1 23 0 2100 104 14 0 chr17 75172935 75173296 -10265184 - AluSq SINE Alu 0 365 1 352 283 139 27 chr17 75173385 75173643 -10264837 - L1ME4a LINE L1 -199 5922 5636 220 283 0 0 chr17 75173976 75174029 -10264451 + (CATA)n Simple_repeat Simple_repeat 3 55 0 333 304 19 27 chr17 75174452 75174686 -10263794 + L1ME3A LINE L1 1461 1656 -4559 1566 264 130 47 chr17 75174724 75175878 -10262602 + L1ME3A LINE L1 3375 4433 -1806 1614 108 31 8 chr17 75175878 75176136 -10262344 - L1PA13 LINE L1 -1 6162 5899 1566 264 130 47 chr17 75176136 75176556 -10261924 + L1ME3A LINE L1 4433 4817 -1422 2331 152 23 5 chr17 75176556 75176952 -10261528 - MER57A LTR ERV1 0 403 1 1566 264 130 47 chr17 75176952 75177691 -10260789 + L1ME3A LINE L1 4817 6020 -219 2584 87 31 6 chr17 75229675 75230030 -10208450 + THE1B LTR MaLR 1 364 0 1527 253 78 9 chr17 75230386 75230911 -10207569 - L1ME2 LINE L1 -38 6126 5566 917 199 38 88 chr17 75231089 75231323 -10207157 - L1ME2 LINE L1 -611 5551 5344 2035 105 16 40 chr17 75231323 75231627 -10206853 - AluSx SINE Alu -15 297 1 917 199 38 88 chr17 75231627 75231790 -10206690 - L1ME2 LINE L1 -818 5344 5175 577 321 80 15 chr17 75231827 75232166 -10206314 - L1MEc LINE L1 -5978 418 58 206 256 146 0 chr17 75232661 75232743 -10205737 - MIR SINE MIR -10 252 159 279 284 14 0 chr17 75232748 75232822 -10205658 + MIR SINE MIR 78 152 -110 2644 45 3 0 chr17 75233064 75233373 -10205107 + AluY SINE Alu 1 310 -1 563 330 148 49 chr17 75233643 75234231 -10204249 + HAL1 LINE L1 424 1069 -1438 867 259 24 31 chr17 75234288 75234577 -10203903 - L1MEc LINE L1 -6044 352 66 267 31 0 0 chr17 75234586 75234618 -10203862 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 2122 135 0 0 chr17 75234623 75234912 -10203568 - AluSx SINE Alu -23 289 1 6912 94 13 7 chr17 75234925 75235996 -10202484 - L1MA2 LINE L1 0 6304 5227 831 227 178 40 chr17 75236328 75236649 -10201831 + MLT1A1 LTR MaLR 1 365 0 268 327 51 19 chr17 75236651 75236807 -10201673 + MIR SINE MIR 102 262 0 2163 114 0 7 chr17 75238012 75238301 -10200179 + AluSq SINE Alu 1 287 -26 195 206 82 68 chr17 75238481 75238554 -10199926 + MIR SINE MIR 131 204 -58 856 230 124 5 chr17 75240802 75241011 -10197469 + MIR SINE MIR 29 262 0 763 155 31 0 chr17 75242105 75242234 -10196246 - FLAM_C SINE Alu 0 133 1 2251 122 0 0 chr17 75242287 75242598 -10195882 + AluSx SINE Alu 1 311 -1 196 362 92 24 chr17 75242930 75243137 -10195343 + L3b LINE CR1 1326 1546 -37 186 103 0 0 chr17 75243809 75243838 -10194642 + (TG)n Simple_repeat Simple_repeat 2 30 0 280 384 14 32 chr17 75245227 75245443 -10193037 + L2 LINE L2 2969 3180 -92 497 319 88 9 chr17 75245734 75245950 -10192530 - MIR SINE MIR 0 262 30 2024 138 30 13 chr17 75246945 75247250 -10191230 - AluSg SINE Alu 0 310 1 243 212 0 0 chr17 75247696 75247781 -10190699 + (TA)n Simple_repeat Simple_repeat 1 85 0 2189 116 0 7 chr17 75247893 75248185 -10190295 + AluSg SINE Alu 1 290 -20 1199 196 65 76 chr17 75248199 75248566 -10189914 - MLT1A1 LTR MaLR 0 365 3 418 236 57 70 chr17 75248589 75248746 -10189734 + MLT1H LTR MaLR 379 533 -16 324 328 45 15 chr17 75248948 75249082 -10189398 - MIR3 SINE MIR -13 195 58 2335 114 0 0 chr17 75249216 75249522 -10188958 + AluSx SINE Alu 2 307 -5 2230 94 0 23 chr17 75249523 75249822 -10188658 + AluY SINE Alu 1 292 -19 2001 123 7 10 chr17 75250647 75250940 -10187540 + AluSc SINE Alu 1 292 -17 832 110 0 0 chr17 75250955 75251064 -10187416 + AluSx SINE Alu 5 113 -199 1310 131 0 15 chr17 75251372 75251570 -10186910 + AluSx SINE Alu 113 307 -3 289 323 15 62 chr17 75252481 75252611 -10185869 + L2 LINE L2 3189 3312 -1 2742 17 0 0 chr17 75252627 75252929 -10185551 - AluYa5 SINE Alu -9 302 1 213 65 0 0 chr17 75253078 75253109 -10185371 + (TTTTA)n Simple_repeat Simple_repeat 4 34 0 3682 47 0 0 chr17 75253109 75253556 -10184924 - L1PA5 LINE L1 -13 6141 5695 294 305 8 76 chr17 75254054 75254118 -10184362 + MIR SINE MIR 5 57 -205 2895 10 0 0 chr17 75254118 75254432 -10184048 - AluYb8 SINE Alu -4 314 1 294 305 8 76 chr17 75254432 75254498 -10183982 + MIR SINE MIR 57 126 -136 746 171 0 0 chr17 75255681 75255810 -10182670 - L1PB4 LINE L1 0 6156 6028 654 247 6 0 chr17 75255998 75256156 -10182324 + MSTD LTR MaLR 1 159 -237 2327 96 0 6 chr17 75256391 75256703 -10181777 + AluY SINE Alu 1 310 -1 297 265 12 0 chr17 75257054 75257137 -10181343 + (TA)n Simple_repeat Simple_repeat 1 84 0 340 252 109 22 chr17 75257149 75257379 -10181101 - L1MC4a LINE L1 -1856 5952 5703 191 114 29 0 chr17 75258168 75258203 -10180277 + GA-rich Low_complexity Low_complexity 1 36 0 2141 133 141 5 chr17 75258391 75258768 -10179712 - MSTA LTR MaLR 0 428 1 773 206 0 0 chr17 75258924 75259060 -10179420 + FLAM_C SINE Alu 1 136 -7 408 240 20 10 chr17 75259276 75259376 -10179104 - MIR SINE MIR -111 151 51 665 257 49 49 chr17 75259496 75259722 -10178758 + MIR SINE MIR 28 253 -9 389 250 133 7 chr17 75261225 75261430 -10177050 - MIR SINE MIR -2 260 3 189 107 0 0 chr17 75262262 75262290 -10176190 + (A)n Simple_repeat Simple_repeat 1 28 0 406 200 0 42 chr17 75262534 75262629 -10175851 + MIR SINE MIR 65 155 -107 498 96 0 0 chr17 75262689 75262762 -10175718 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 392 344 73 32 chr17 75263090 75263337 -10175143 - L3 LINE CR1 -25 1552 1296 314 320 24 8 chr17 75265394 75265519 -10172961 + MIR SINE MIR 20 146 -116 317 272 74 0 chr17 75265609 75265690 -10172790 - L2 LINE L2 -34 3279 3193 2125 130 0 0 chr17 75266291 75266608 -10171872 + AluSq SINE Alu 1 317 0 195 197 13 145 chr17 75266691 75266767 -10171713 + MIR SINE MIR 9 74 -188 680 254 143 54 chr17 75266773 75267199 -10171281 - MLT1H LTR MaLR 0 549 86 1852 167 9 0 chr17 75267203 75267533 -10170947 - MER93b LTR ERV1 -2 371 39 340 218 77 0 chr17 75267553 75267631 -10170849 - MLT1H LTR MaLR -465 84 1 194 292 104 31 chr17 75267680 75267776 -10170704 + MIR SINE MIR 160 262 0 2285 115 0 7 chr17 75267838 75268143 -10170337 - AluSx SINE Alu -9 303 1 21 95 0 0 chr17 75269478 75269541 -10168939 + AT_rich Low_complexity Low_complexity 1 63 0 220 244 0 0 chr17 75269799 75269844 -10168636 + (TA)n Simple_repeat Simple_repeat 2 46 0 297 0 0 0 chr17 75270204 75270237 -10168243 + (CA)n Simple_repeat Simple_repeat 2 34 0 342 0 0 0 chr17 75270645 75270683 -10167797 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2182 117 0 0 chr17 75270686 75270976 -10167504 - AluSx SINE Alu -22 290 1 242 344 10 21 chr17 75271408 75271504 -10166976 + MIR3 SINE MIR 4 98 -110 1438 146 0 0 chr17 75272200 75272406 -10166074 - AluSc SINE Alu -1 308 103 1933 140 69 26 chr17 75272874 75273223 -10165257 + THE1B LTR MaLR 1 364 0 1225 248 30 24 chr17 75274157 75274496 -10163984 + MER58B DNA MER1_type 1 341 0 290 284 69 17 chr17 75274498 75274614 -10163866 + L2 LINE L2 3191 3312 -1 247 290 215 0 chr17 75275660 75275753 -10162727 - MIR SINE MIR -39 223 111 315 304 8 40 chr17 75275768 75275893 -10162587 - L2 LINE L2 -4 3309 3189 309 221 15 15 chr17 75275891 75275959 -10162521 - MIR SINE MIR -165 97 30 * 2179 95 34 7 chr17 75276964 75277260 -10161220 - AluSq SINE Alu -9 304 1 493 175 155 0 chr17 75277260 75277357 -10161123 - AluSc SINE Alu -58 251 140 2149 120 27 0 chr17 75277361 75277660 -10160820 - AluSx SINE Alu -5 307 1 709 185 185 42 chr17 75278022 75278211 -10160269 - MER20 DNA MER1_type 0 219 4 360 0 0 0 chr17 75278854 75278894 -10159586 + (T)n Simple_repeat Simple_repeat 1 40 0 287 275 0 7 chr17 75279634 75279772 -10158708 + (TG)n Simple_repeat Simple_repeat 2 138 0 315 254 49 99 chr17 75281193 75281335 -10157145 - MIR3 SINE MIR -8 200 66 298 247 22 0 chr17 75282563 75282652 -10155828 + (TA)n Simple_repeat Simple_repeat 2 92 0 1984 105 55 71 chr17 75283608 75283989 -10154491 + THE1C LTR MaLR 1 375 0 212 320 66 83 chr17 75284222 75284403 -10154077 + MIR SINE MIR 25 202 -60 220 262 49 0 chr17 75284678 75284739 -10153741 - MIR3 SINE MIR -10 198 135 944 233 55 87 chr17 75285144 75285617 -10152863 - MER39 LTR ERV1 0 707 250 212 375 73 0 chr17 75286585 75286681 -10151799 + L2 LINE L2 2976 3078 -194 411 311 15 0 chr17 75287097 75287229 -10151251 + MER94 DNA DNA 1 134 0 2497 116 11 3 chr17 75287713 75288074 -10150406 + THE1B LTR MaLR 1 364 0 340 283 9 0 chr17 75288114 75288220 -10150260 + MIR SINE MIR 53 159 -103 232 333 62 0 chr17 75288294 75288375 -10150105 + L2 LINE L2 3187 3272 0 402 347 98 19 chr17 75289518 75289783 -10148697 + HAL1b LINE L1 330 615 -733 189 107 0 0 chr17 75289914 75289942 -10148538 + (TATG)n Simple_repeat Simple_repeat 1 28 0 1483 211 54 0 chr17 75289969 75290249 -10148231 - AluJo SINE Alu -17 295 1 863 270 142 9 chr17 75290320 75290650 -10147830 + LTR16B LTR ERVL 78 451 -13 246 283 0 0 chr17 75291979 75292039 -10146441 + CT-rich Low_complexity Low_complexity 1 60 0 350 220 112 13 chr17 75292071 75292219 -10146261 + MLT1J2 LTR MaLR 306 489 -22 2323 145 8 125 chr17 75292527 75293016 -10145464 - MSTB1 LTR MaLR 0 432 1 245 75 45 30 chr17 75293844 75293911 -10144569 + A-rich Low_complexity Low_complexity 3 70 0 23 0 0 0 chr17 75294416 75294439 -10144041 + AT_rich Low_complexity Low_complexity 1 23 0 673 237 48 83 chr17 75294609 75294837 -10143643 - MIR SINE MIR -15 247 28 11667 201 28 5 chr17 75295819 75299321 -10139159 - L1PA16 LINE L1 0 6166 2587 1673 113 4 2 chr17 75299319 75299594 -10138886 - L1P4 LINE L1 -606 5562 5291 * 2527 102 65 3 chr17 75299605 75299958 -10138522 + THE1C LTR MaLR 1 375 0 1988 160 29 3 chr17 75300316 75300660 -10137820 - L1MB3 LINE L1 0 6183 5831 246 62 0 0 chr17 75301079 75301111 -10137369 + (A)n Simple_repeat Simple_repeat 1 32 0 1738 198 31 0 chr17 75302485 75302808 -10135672 + MER58B DNA MER1_type 9 341 0 218 316 76 41 chr17 75303086 75303148 -10135332 + MER5B DNA MER1_type 2 60 -118 2194 98 3 3 chr17 75303148 75303457 -10135023 + AluSx SINE Alu 1 309 0 218 316 76 41 chr17 75303457 75303564 -10134916 + MER5B DNA MER1_type 60 178 0 6140 128 47 33 chr17 75303573 75304331 -10134149 + Tigger3b DNA MER2_type 1 780 -2248 2281 94 7 0 chr17 75304331 75304618 -10133862 - AluSx SINE Alu -23 289 1 6140 128 47 33 chr17 75304618 75304932 -10133548 + Tigger3b DNA MER2_type 780 1088 -143 198 0 0 0 chr17 75305081 75305103 -10133377 + (TCTA)n Simple_repeat Simple_repeat 4 25 0 2333 74 0 0 chr17 75305120 75305405 -10133075 - AluY SINE Alu -26 285 1 207 0 0 0 chr17 75306347 75306370 -10132110 + (T)n Simple_repeat Simple_repeat 1 23 0 839 167 0 0 chr17 75306753 75306879 -10131601 - FLAM_C SINE Alu -7 126 1 303 290 61 0 chr17 75306891 75306998 -10131482 + MIR SINE MIR 79 191 -61 1343 119 31 0 chr17 75308635 75308929 -10129551 - L1MA3 LINE L1 -6 6299 5891 304 340 49 0 chr17 75309462 75309624 -10128856 - L1MC4 LINE L1 -1278 6764 6595 2176 92 0 49 chr17 75309629 75309935 -10128545 - AluSg SINE Alu -19 291 1 686 264 98 25 chr17 75309935 75310212 -10128268 - MLT1L LTR MaLR -186 429 133 205 358 171 16 chr17 75311182 75311305 -10127175 + L2 LINE L2 3116 3257 -15 2731 208 45 7 chr17 75311576 75312193 -10126287 - L1PA13 LINE L1 -4766 2021 1381 2933 286 35 43 chr17 75312326 75313303 -10125177 - L1PA13 LINE L1 -5818 969 1 2152 179 49 7 chr17 75313314 75313721 -10124759 - MSTB1 LTR MaLR -8 424 1 522 310 35 42 chr17 75313937 75314082 -10124398 - L1MEc LINE L1 -6085 311 167 2281 80 0 0 chr17 75314082 75314368 -10124112 + AluY SINE Alu 20 305 -6 522 310 35 42 chr17 75314368 75314509 -10123971 - L1MEc LINE L1 -6229 167 27 2006 160 0 0 chr17 75314815 75315115 -10123365 - AluSx SINE Alu -12 300 1 226 353 98 8 chr17 75315158 75315291 -10123189 - L2 LINE L2 -12 3260 3116 482 353 141 13 chr17 75315393 75315931 -10122549 - L2 LINE L2 -341 2973 2367 500 294 179 36 chr17 75315956 75316374 -10122106 - L2 LINE L2 0 3313 2836 323 316 31 46 chr17 75316504 75316700 -10121780 - L2 LINE L2 -970 2344 2152 202 75 75 0 chr17 75320866 75320906 -10117574 + CT-rich Low_complexity Low_complexity 2 44 0 389 343 84 0 chr17 75321019 75321185 -10117295 - MIR SINE MIR -10 252 73 311 260 76 87 chr17 75321189 75321530 -10116950 - MLT1I LTR MaLR 0 409 76 2360 84 0 3 chr17 75322677 75322975 -10115505 + AluY SINE Alu 1 297 -14 228 220 0 34 chr17 75324184 75324243 -10114237 + MER58B DNA MER1_type 1 57 -284 * 749 203 0 27 chr17 75324219 75324367 -10114113 + MER58B DNA MER1_type 195 338 -3 283 275 77 46 chr17 75324463 75324640 -10113840 + L1ME LINE L1 5255 5440 -919 371 221 134 54 chr17 75324682 75324831 -10113649 + L1ME LINE L1 5525 5685 -436 412 301 28 34 chr17 75324861 75325037 -10113443 + MIR SINE MIR 61 235 -27 180 242 16 137 chr17 75325135 75325259 -10113221 - MIR SINE MIR -65 143 35 2233 98 0 20 chr17 75325857 75326163 -10112317 + AluSq SINE Alu 1 300 -13 2188 101 10 0 chr17 75326241 75326537 -10111943 - AluSx SINE Alu 0 312 14 350 315 142 6 chr17 75326712 75326913 -10111567 - MIR SINE MIR -13 249 25 1480 164 18 6 chr17 75327731 75328024 -10110456 - MLT1D LTR MaLR 0 505 225 188 200 55 36 chr17 75328233 75328288 -10110192 + MIR SINE MIR 94 149 -113 2404 73 0 0 chr17 75328458 75328770 -10109710 - AluY SINE Alu 0 312 1 306 123 0 0 chr17 75329901 75329958 -10108522 + (A)n Simple_repeat Simple_repeat 1 57 0 255 31 0 0 chr17 75329953 75329985 -10108495 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 536 300 142 42 chr17 75331871 75332213 -10106267 - L2 LINE L2 -22 3291 2900 1679 152 124 6 chr17 75332213 75332536 -10105944 - MER46B DNA MER2_type 0 236 1 536 300 142 42 chr17 75332536 75332603 -10105877 - L2 LINE L2 -413 2900 2841 1646 195 68 86 chr17 75332876 75332977 -10105503 + MLT1C LTR MaLR 1 102 -365 1815 225 17 6 chr17 75332977 75333337 -10105143 + MLT1A1 LTR MaLR 2 365 0 1646 195 68 86 chr17 75333337 75333561 -10104919 + MLT1C LTR MaLR 102 318 -149 2023 128 14 0 chr17 75333561 75333849 -10104631 - AluSx SINE Alu -18 294 3 1646 195 68 86 chr17 75333849 75333989 -10104491 + MLT1C LTR MaLR 318 459 -8 4575 289 92 26 chr17 75334011 75334043 -10104437 + L2 LINE L2 200 228 -3086 2286 114 16 50 chr17 75334043 75334420 -10104060 - THE1B LTR MaLR 0 364 1 4575 289 92 26 chr17 75334420 75336551 -10101929 + L2 LINE L2 228 2505 -809 638 266 93 69 chr17 75336583 75336857 -10101623 - L2 LINE L2 -174 3139 2873 1483 202 49 41 chr17 75336857 75337244 -10101236 - MLT1B LTR MaLR 0 390 1 638 266 93 69 chr17 75337244 75337325 -10101155 - L2 LINE L2 -440 2873 2795 2298 102 3 3 chr17 75337325 75337630 -10100850 - AluSc SINE Alu -4 305 1 638 266 93 69 chr17 75337630 75337791 -10100689 - L2 LINE L2 -518 2795 2613 1327 163 93 35 chr17 75337863 75338120 -10100360 - THE1B LTR MaLR 0 364 93 444 242 20 116 chr17 75338325 75338416 -10100064 - MER97c DNA MER1_type? -911 179 116 2095 128 3 0 chr17 75338416 75338705 -10099775 - AluSx SINE Alu -19 293 4 444 242 20 116 chr17 75338705 75338811 -10099669 - MER97c DNA MER1_type? -974 116 1 750 242 26 5 chr17 75339993 75340187 -10098293 + MIR SINE MIR 65 262 0 882 306 140 10 chr17 75340309 75340695 -10097785 + L2 LINE L2 2877 3312 -1 1503 106 53 0 chr17 75340717 75340924 -10097556 - AluSx SINE Alu -94 218 1 21 0 0 0 chr17 75342646 75342667 -10095813 + AT_rich Low_complexity Low_complexity 1 21 0 221 321 98 36 chr17 75343061 75343173 -10095307 + MIR SINE MIR 20 138 -70 1748 133 4 4 chr17 75343337 75343586 -10094894 - MER1B DNA MER1_type 0 339 131 827 321 43 20 chr17 75343881 75344233 -10094247 + MER20B DNA MER1_type 4 363 -420 356 175 29 10 chr17 75344233 75344336 -10094144 + (TA)n Simple_repeat Simple_repeat 2 106 0 2350 91 0 0 chr17 75344337 75344634 -10093846 - AluY SINE Alu -14 297 1 383 276 26 0 chr17 75344635 75344751 -10093729 + MER20B DNA MER1_type 353 471 -312 349 179 84 32 chr17 75344926 75345021 -10093459 + MER45A DNA AcHobo 79 178 0 384 175 0 0 chr17 75345022 75345085 -10093395 - MER58 DNA MER1_type 0 2420 2358 2944 91 0 3 chr17 75345118 75345481 -10092999 + THE1B LTR MaLR 1 362 -2 501 250 52 6 chr17 75345773 75345945 -10092535 + MER20B DNA MER1_type 594 773 -10 464 125 68 0 chr17 75346676 75346764 -10091716 - MER53 DNA DNA 0 189 96 1762 174 3 3 chr17 75346952 75347240 -10091240 - AluJo SINE Alu -24 288 1 285 228 99 20 chr17 75347281 75347382 -10091098 + MLT1L LTR MaLR 499 607 -8 421 287 131 75 chr17 75347751 75348019 -10090461 + MLT1K LTR MaLR 2 284 -304 1204 129 160 62 chr17 75348047 75348251 -10090229 - MSTA LTR MaLR 0 428 193 2193 86 6 42 chr17 75348251 75348564 -10089916 - AluSg SINE Alu -8 302 1 1204 129 160 62 chr17 75348564 75348615 -10089865 - MSTA LTR MaLR -235 193 148 573 291 30 43 chr17 75348806 75348905 -10089575 - MIR SINE MIR -1 261 162 2615 45 7 0 chr17 75348905 75349214 -10089266 + AluY SINE Alu 1 311 0 573 291 30 43 chr17 75349214 75349348 -10089132 - MIR SINE MIR -100 162 31 2284 80 6 19 chr17 75349544 75349858 -10088622 - AluY SINE Alu 0 311 2 491 275 88 81 chr17 75350493 75350890 -10087590 - MLT1I LTR MaLR 0 409 10 970 200 93 4 chr17 75351060 75351285 -10087195 - L1MB5 LINE L1 -8 6166 5922 3193 183 30 30 chr17 75351349 75351464 -10087016 - L1MB5 LINE L1 -235 5939 5825 1969 120 232 6 chr17 75351464 75351619 -10086861 + MSTA LTR MaLR 1 120 -308 498 33 0 0 chr17 75351619 75351679 -10086801 + (TG)n Simple_repeat Simple_repeat 2 61 0 1969 120 232 6 chr17 75351679 75351872 -10086608 + MSTA LTR MaLR 120 428 0 3193 183 30 30 chr17 75351872 75352538 -10085942 - L1MB5 LINE L1 -349 5825 5163 1299 169 64 71 chr17 75352538 75352834 -10085646 + AluJo SINE Alu 1 294 -18 3193 183 30 30 chr17 75352834 75353168 -10085312 - L1MB5 LINE L1 -1011 5163 4830 217 307 13 13 chr17 75353256 75353331 -10085149 - L3b LINE CR1 -222 1361 1287 322 313 56 28 chr17 75353376 75353520 -10084960 - L2 LINE L2 -7 3265 3118 973 298 65 15 chr17 75353962 75354298 -10084182 - LTR16A LTR ERVL -28 422 70 853 238 0 0 chr17 75354300 75354451 -10084029 + FRAM SINE Alu 1 151 -25 29 0 0 0 chr17 75354452 75354481 -10083999 + AT_rich Low_complexity Low_complexity 1 29 0 369 290 55 3 chr17 75354600 75354739 -10083741 - MIR SINE MIR -65 143 15 475 216 0 10 chr17 75355495 75355623 -10082857 + FLAM_C SINE Alu 43 169 0 665 142 0 71 chr17 75355624 75355737 -10082743 + AluJb SINE Alu 131 235 -77 1618 132 169 83 chr17 75355783 75356132 -10082348 - MER4A LTR ERV1 -25 639 261 356 234 13 0 chr17 75356355 75356432 -10082048 + MER3 DNA MER1_type 1 78 -131 23 54 0 0 chr17 75356474 75356511 -10081969 + AT_rich Low_complexity Low_complexity 1 37 0 546 193 17 8 chr17 75356513 75356632 -10081848 + MER3 DNA MER1_type 82 201 -8 240 342 26 32 chr17 75356639 75356794 -10081686 - MIR3 SINE MIR -25 183 30 1685 286 33 33 chr17 75357010 75357303 -10081177 - HERV16 LTR ERVL -2118 2878 2583 2390 103 0 0 chr17 75357303 75357614 -10080866 - AluY SINE Alu 0 311 1 1685 286 33 33 chr17 75357614 75357865 -10080615 - HERV16 LTR ERVL -2412 2584 2334 496 222 0 0 chr17 75357871 75357970 -10080510 - MER58 DNA MER1_type -1 2419 2321 2066 274 107 95 chr17 75358055 75358281 -10080199 - HERV16 LTR ERVL -2665 2331 2109 2317 163 84 3 chr17 75358281 75358673 -10079807 - MSTA LTR MaLR -4 424 1 2066 274 107 95 chr17 75358673 75359692 -10078788 - HERV16 LTR ERVL -2887 2109 1104 524 118 0 0 chr17 75359692 75359760 -10078720 + FLAM_A SINE Alu 47 114 -28 2202 132 47 50 chr17 75359761 75360124 -10078356 - THE1B LTR MaLR -2 362 1 12731 88 6 2 chr17 75360124 75361697 -10076783 - THE1B-int LTR MaLR 0 1580 1 2199 136 57 28 chr17 75361697 75362051 -10076429 - THE1B LTR MaLR 0 364 1 2066 274 107 95 chr17 75362051 75362568 -10075912 - HERV16 LTR ERVL -3891 1105 474 183 42 0 0 chr17 75362685 75362709 -10075771 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1008 267 73 0 chr17 75362709 75362997 -10075483 - HERV16 LTR ERVL -4685 311 3 1256 285 66 7 chr17 75362999 75363410 -10075070 - LTR16A LTR ERVL 0 450 16 213 260 0 27 chr17 75363784 75363857 -10074623 + G-rich Low_complexity Low_complexity 2 72 0 2251 96 0 0 chr17 75364655 75364973 -10073507 + AluSg SINE Alu 1 318 0 2085 100 4 0 chr17 75365005 75365275 -10073205 - AluSg SINE Alu -11 299 29 600 170 0 0 chr17 75365690 75365784 -10072696 - FLAM_A SINE Alu -10 132 39 21 0 0 0 chr17 75366433 75366454 -10072026 + AT_rich Low_complexity Low_complexity 1 21 0 232 262 0 0 chr17 75366527 75366569 -10071911 + L2 LINE L2 3212 3253 -60 991 195 47 33 chr17 75366578 75366793 -10071687 + MER20 DNA MER1_type 2 219 0 232 236 0 18 chr17 75366860 75366915 -10071565 + MER106B DNA MER1_type 1 54 -1005 236 315 18 9 chr17 75366923 75367034 -10071446 + MER106B DNA MER1_type 933 1044 -15 1579 176 35 16 chr17 75368609 75368703 -10069777 + L1MA9 LINE L1 5994 6085 -227 4057 126 26 52 chr17 75368703 75369354 -10069126 + MER41B LTR ERV1 1 634 -1 1579 176 35 16 chr17 75369354 75369572 -10068908 + L1MA9 LINE L1 6085 6312 0 387 0 0 0 chr17 75369603 75369646 -10068834 + (CA)n Simple_repeat Simple_repeat 1 43 0 194 259 190 26 chr17 75371136 75371252 -10067228 + L2 LINE L2 2940 3074 -198 36 23 0 0 chr17 75371319 75371362 -10067118 + AT_rich Low_complexity Low_complexity 1 43 0 668 279 43 39 chr17 75371493 75371726 -10066754 + MIR SINE MIR 29 262 0 246 371 113 0 chr17 75372454 75372605 -10065875 - MIR3 SINE MIR -28 180 13 293 271 18 86 chr17 75372781 75372980 -10065500 + L1ME LINE L1 5668 5844 -302 2021 139 0 3 chr17 75373428 75373723 -10064757 - AluJb SINE Alu -18 294 1 1909 119 0 0 chr17 75373893 75374145 -10064335 + AluSx SINE Alu 59 310 -2 190 302 71 24 chr17 75374742 75374868 -10063612 + L2 LINE L2 2873 3004 -268 1803 146 17 36 chr17 75375027 75375328 -10063152 + AluJo SINE Alu 1 295 -17 275 271 247 18 chr17 75376989 75377155 -10061325 - MIR SINE MIR -44 218 15 247 82 122 0 chr17 75377245 75377294 -10061186 - MLT2A2 LTR ERVL 0 453 399 303 266 0 43 chr17 75377302 75377396 -10061084 + L1MC4 LINE L1 6614 6703 -1339 242 143 20 0 chr17 75377399 75377448 -10061032 + (TA)n Simple_repeat Simple_repeat 1 50 0 324 48 0 0 chr17 75377513 75377555 -10060925 + (TA)n Simple_repeat Simple_repeat 1 42 0 3096 76 0 13 chr17 75377555 75377949 -10060531 - MLT2A1 LTR ERVL -55 389 1 250 311 123 48 chr17 75378356 75378584 -10059896 + MIR SINE MIR 18 262 0 244 309 68 6 chr17 75379692 75379854 -10058626 + L1M LINE L1 5255 5426 -2382 247 246 30 82 chr17 75380088 75380222 -10058258 - L1M4 LINE L1 -1490 4656 4530 2373 91 3 0 chr17 75380383 75380681 -10057799 + AluSg SINE Alu 1 299 -11 201 311 46 81 chr17 75380763 75381023 -10057457 + L2 LINE L2 2854 3104 -168 676 137 0 42 chr17 75381045 75381116 -10057364 + (TTTCC)n Simple_repeat Simple_repeat 4 76 -88 2295 83 7 0 chr17 75381116 75381417 -10057063 - AluY SINE Alu 0 311 9 676 137 0 42 chr17 75381417 75381513 -10056967 + (TTTCC)n Simple_repeat Simple_repeat 76 164 0 280 233 11 11 chr17 75381503 75381593 -10056887 + CT-rich Low_complexity Low_complexity 3 92 0 * 2180 94 0 26 chr17 75381617 75381924 -10056556 - AluSx SINE Alu -13 299 1 427 309 96 44 chr17 75381944 75382193 -10056287 + MIR SINE MIR 1 262 0 318 351 0 0 chr17 75382240 75382334 -10056146 + L2 LINE L2 3217 3310 -3 328 192 87 125 chr17 75382526 75382630 -10055850 + L3 LINE CR1 1381 1480 -97 192 160 200 0 chr17 75382605 75382655 -10055825 + MIR3 SINE MIR 144 203 -5 * 195 289 0 0 chr17 75383070 75383108 -10055372 + MIR SINE MIR 36 73 -135 338 346 60 28 chr17 75383837 75384019 -10054461 + L2 LINE L2 3071 3258 -14 2287 95 0 7 chr17 75384638 75384934 -10053546 - AluSc SINE Alu -15 294 1 220 303 13 13 chr17 75384950 75385026 -10053454 + CT-rich Low_complexity Low_complexity 3 78 0 371 247 11 11 chr17 75386250 75386343 -10052137 + (TCTCTG)n Simple_repeat Simple_repeat 2 94 0 780 196 137 15 chr17 75388536 75388740 -10049740 + MIR SINE MIR 31 259 -3 1192 140 6 6 chr17 75389059 75389238 -10049242 + AluJo SINE Alu 20 198 -114 5214 127 25 17 chr17 75389241 75389996 -10048484 - MER4E LTR ERV1 0 779 16 371 39 39 0 chr17 75389996 75390048 -10048432 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 5214 127 25 17 chr17 75390048 75390065 -10048415 - MER4E LTR ERV1 -763 16 1 568 111 33 0 chr17 75390097 75390187 -10048293 - MER53 DNA DNA 0 189 97 220 222 22 0 chr17 75391150 75391195 -10047285 + L2 LINE L2 3262 3307 -6 2260 215 12 29 chr17 75392181 75392693 -10045787 + L1MB7 LINE L1 5478 5980 -204 217 258 0 76 chr17 75393713 75393779 -10044701 - MIR3 SINE MIR -37 171 111 2292 151 27 0 chr17 75394981 75395353 -10043127 + MLT1B LTR MaLR 7 388 -2 401 268 15 157 chr17 75395771 75396178 -10042302 - L2 LINE L2 -10 3303 2955 308 241 21 92 chr17 75396337 75396478 -10042002 - MIR SINE MIR -46 216 86 1810 142 4 21 chr17 75397250 75397531 -10040949 + AluJo SINE Alu 11 286 -26 207 0 0 0 chr17 75398359 75398382 -10040098 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2145 98 0 39 chr17 75398384 75398690 -10039790 - AluSx SINE Alu -18 294 1 487 134 67 220 chr17 75399064 75399287 -10039193 + MER53 DNA DNA 1 189 0 285 180 35 0 chr17 75399433 75399605 -10038875 + (TA)n Simple_repeat Simple_repeat 1 178 0 260 232 32 0 chr17 75399616 75399741 -10038739 + (TA)n Simple_repeat Simple_repeat 1 129 0 348 137 24 30 chr17 75399747 75399915 -10038565 + (TTATA)n Simple_repeat Simple_repeat 5 171 0 231 145 41 76 chr17 75399944 75400089 -10038391 + (TATAA)n Simple_repeat Simple_repeat 5 144 0 * 319 161 84 0 chr17 75399985 75400128 -10038352 + (TA)n Simple_repeat Simple_repeat 2 156 0 2370 98 0 0 chr17 75400663 75400960 -10037520 - AluSc SINE Alu -12 297 1 260 276 106 24 chr17 75400962 75401085 -10037395 + L2 LINE L2 3140 3272 0 2920 83 11 6 chr17 75401247 75401609 -10036871 + THE1B LTR MaLR 1 364 0 1344 195 148 8 chr17 75402251 75402508 -10035972 - AluJo SINE Alu -9 293 1 651 307 37 5 chr17 75403379 75403597 -10034883 + MIR SINE MIR 3 227 -35 458 96 14 0 chr17 75404357 75404430 -10034050 + (TAGA)n Simple_repeat Simple_repeat 2 75 0 31 0 0 0 chr17 75405254 75405285 -10033195 + AT_rich Low_complexity Low_complexity 1 31 0 619 263 251 0 chr17 75405724 75405895 -10032585 - MER20 DNA MER1_type -2 217 4 221 381 65 18 chr17 75407470 75407638 -10030842 - MIR3 SINE MIR -12 196 21 372 274 82 88 chr17 75407760 75408114 -10030366 + L1MDa LINE L1 1676 2027 -4513 308 293 33 103 chr17 75408282 75408414 -10030066 + L1ME LINE L1 5540 5641 -529 2254 106 0 6 chr17 75408414 75408725 -10029755 + AluSc SINE Alu 1 309 0 308 293 33 103 chr17 75408725 75408892 -10029588 + L1ME LINE L1 5641 5818 -352 1239 107 34 36 chr17 75409612 75409847 -10028633 - MER1B DNA MER1_type 0 333 59 2312 75 3 3 chr17 75411193 75411486 -10026994 + AluSc SINE Alu 1 293 -16 226 278 0 41 chr17 75411539 75411636 -10026844 + CT-rich Low_complexity Low_complexity 1 93 0 2297 96 0 0 chr17 75411844 75412146 -10026334 + AluY SINE Alu 3 304 -7 2174 128 0 0 chr17 75412529 75412826 -10025654 - AluSx SINE Alu -11 301 5 297 0 0 0 chr17 75413314 75413347 -10025133 + (TC)n Simple_repeat Simple_repeat 1 33 0 183 42 0 0 chr17 75413346 75413370 -10025110 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 35 0 0 0 chr17 75414148 75414183 -10024297 + AT_rich Low_complexity Low_complexity 1 35 0 537 306 44 38 chr17 75414638 75414821 -10023659 - MIR3 SINE MIR -7 201 18 210 71 0 0 chr17 75414953 75414981 -10023499 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 868 238 10 15 chr17 75415366 75415568 -10022912 + MLT1B-int LTR MaLR 158 358 -1013 1709 211 36 8 chr17 75415738 75416102 -10022378 + MLT1B-int LTR MaLR 352 725 -646 286 266 25 0 chr17 75416241 75416320 -10022160 + MLT1B-int LTR MaLR 686 766 -969 2354 190 28 28 chr17 75416371 75416703 -10021777 + MLT1B-int LTR MaLR 1267 1601 -134 2104 129 13 0 chr17 75416703 75417005 -10021475 - AluSx SINE Alu -6 306 1 2354 190 28 28 chr17 75417005 75417141 -10021339 + MLT1B-int LTR MaLR 1600 1735 0 1183 218 98 22 chr17 75417141 75417302 -10021178 + MLT1B LTR MaLR 1 148 -242 246 32 0 0 chr17 75417302 75417333 -10021147 + (TC)n Simple_repeat Simple_repeat 2 32 0 1183 218 98 22 chr17 75417333 75417487 -10020993 + MLT1B LTR MaLR 148 340 -50 830 253 0 16 chr17 75417505 75417695 -10020785 - MLT1E2 LTR MaLR -439 187 1 631 234 160 55 chr17 75417695 75418237 -10020243 + Charlie2 DNA MER1_type 2248 2846 -16 22 0 0 0 chr17 75418296 75418318 -10020162 + AT_rich Low_complexity Low_complexity 1 22 0 1552 106 18 0 chr17 75418584 75418801 -10019679 - AluSg/x SINE Alu -9 301 81 308 273 31 70 chr17 75418919 75419047 -10019433 + L2 LINE L2 2172 2294 -1020 2150 102 3 3 chr17 75419047 75419485 -10018995 - AluSq SINE Alu 0 438 1 210 309 118 46 chr17 75419649 75419801 -10018679 - MIR SINE MIR -98 164 2 261 397 36 13 chr17 75419973 75420197 -10018283 + L2 LINE L2 2729 2957 -357 317 273 193 38 chr17 75420657 75420895 -10017585 - L1M4 LINE L1 -1911 4235 3961 2384 130 52 0 chr17 75420915 75421261 -10017219 - THE1B LTR MaLR 0 364 1 600 303 32 56 chr17 75422240 75422524 -10015956 + L2 LINE L2 2519 2795 -519 186 316 242 17 chr17 75422625 75422856 -10015624 + L2 LINE L2 2813 3095 -177 2466 71 0 10 chr17 75423666 75423974 -10014506 + AluSc SINE Alu 1 305 -4 212 290 0 0 chr17 75425203 75425265 -10013215 - MIR3 SINE MIR -4 204 143 252 111 0 0 chr17 75425595 75425640 -10012840 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 200 319 17 52 chr17 75426205 75426321 -10012159 - L2 LINE L2 -4 3268 3157 481 261 43 39 chr17 75426366 75426573 -10011907 - L2 LINE L2 -2 3311 3104 411 239 46 9 chr17 75426751 75426860 -10011620 - L2 LINE L2 -8 3305 3193 979 327 84 12 chr17 75427018 75427615 -10010865 - L2 LINE L2 -411 2903 2264 263 324 0 45 chr17 75428012 75428123 -10010357 - MIR SINE MIR -69 139 34 297 178 99 89 chr17 75428751 75428852 -10009628 + MER81 DNA DNA 13 114 0 180 111 0 0 chr17 75428868 75428895 -10009585 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 227 232 49 151 chr17 75429056 75429241 -10009239 + L1MC4 LINE L1 7866 8031 -11 2456 71 10 0 chr17 75429523 75429832 -10008648 + AluSp SINE Alu 1 312 -1 634 311 42 17 chr17 75430598 75430839 -10007641 + MIR SINE MIR 15 261 -1 201 129 0 0 chr17 75432813 75432844 -10005636 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 222 303 10 61 chr17 75433339 75433438 -10005042 + MIR SINE MIR 42 135 -73 1950 112 0 0 chr17 75433886 75434144 -10004336 - AluSq SINE Alu -55 258 1 346 359 23 8 chr17 75434178 75434309 -10004171 + MIR SINE MIR 8 140 -122 2105 115 7 13 chr17 75435135 75435440 -10003040 - AluSx SINE Alu -4 308 6 189 74 0 0 chr17 75435507 75435534 -10002946 + (T)n Simple_repeat Simple_repeat 1 27 0 332 178 14 0 chr17 75436330 75436403 -10002077 + GA-rich Low_complexity Low_complexity 1 74 0 246 128 0 0 chr17 75436746 75436785 -10001695 + (TCC)n Simple_repeat Simple_repeat 2 40 0 237 226 131 0 chr17 75436802 75436886 -10001594 + L1MC4 LINE L1 6614 6708 -1334 1265 186 122 18 chr17 75437600 75437879 -10000601 - AluSc SINE Alu 0 309 2 212 146 0 45 chr17 75437962 75438051 -10000429 + (TA)n Simple_repeat Simple_repeat 1 85 0 264 194 9 46 chr17 75438080 75438188 -10000292 + (TA)n Simple_repeat Simple_repeat 1 104 0 319 356 34 0 chr17 75438197 75438343 -10000137 - L2 LINE L2 -193 3120 2970 269 264 127 45 chr17 75439892 75440002 -9998478 + L2 LINE L2 3072 3190 -82 207 178 44 0 chr17 75440022 75440067 -9998413 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr17 75440445 75440466 -9998014 + (A)n Simple_repeat Simple_repeat 1 21 0 215 347 53 0 chr17 75441249 75441324 -9997156 + MIR3 SINE MIR 83 161 -47 2215 103 0 3 chr17 75441631 75441941 -9996539 + AluSc SINE Alu 1 309 0 242 250 0 33 chr17 75443935 75443995 -9994485 - MLT1J2 LTR MaLR -126 324 267 357 257 86 19 chr17 75444032 75444137 -9994343 - MLT1J1 LTR MaLR -263 183 72 514 275 66 33 chr17 75444176 75444358 -9994122 + MIR SINE MIR 65 252 -10 22 70 0 0 chr17 75445050 75445093 -9993387 + AT_rich Low_complexity Low_complexity 1 43 0 1885 143 17 3 chr17 75445177 75445478 -9993002 + AluSx SINE Alu 2 306 -6 427 221 89 128 chr17 75445501 75445759 -9992721 - MLT1L LTR MaLR -54 561 314 277 262 55 85 chr17 75446521 75446595 -9991885 - MER117 DNA MER1_type -33 164 89 2033 85 24 7 chr17 75446595 75446888 -9991592 - AluY SINE Alu -13 298 1 277 262 55 85 chr17 75446888 75446977 -9991503 - MER117 DNA MER1_type -108 89 6 2458 62 0 0 chr17 75447773 75448079 -9990401 + AluY SINE Alu 1 306 -5 773 255 51 37 chr17 75448241 75448483 -9989997 - MIR SINE MIR 0 262 19 2185 98 7 0 chr17 75450177 75450482 -9987998 + AluY SINE Alu 1 307 -4 1878 171 30 61 chr17 75450744 75450890 -9987590 - MLT1B LTR MaLR -9 381 232 2087 95 41 0 chr17 75450890 75451185 -9987295 - AluSp SINE Alu -6 307 1 1878 171 30 61 chr17 75451185 75451431 -9987049 - MLT1B LTR MaLR -158 232 1 2098 112 0 0 chr17 75451448 75451743 -9986737 - AluSg SINE Alu -14 296 2 288 277 110 9 chr17 75451768 75451918 -9986562 - MIR SINE MIR -21 187 21 498 270 60 54 chr17 75452573 75452758 -9985722 - MIR SINE MIR -49 213 28 2205 88 7 10 chr17 75453022 75453316 -9985164 + AluSg SINE Alu 5 297 -13 205 355 83 0 chr17 75453319 75453440 -9985040 - MIR SINE MIR -1 261 131 285 98 0 0 chr17 75453447 75453488 -9984992 + (TG)n Simple_repeat Simple_repeat 2 42 0 288 130 0 0 chr17 75453496 75453542 -9984938 + (CA)n Simple_repeat Simple_repeat 2 47 0 1807 155 10 0 chr17 75453542 75453832 -9984648 - AluJo SINE Alu -19 293 1 290 255 144 58 chr17 75453945 75454153 -9984327 - L1ME LINE L1 -432 5689 5464 644 281 36 15 chr17 75454176 75454372 -9984108 - MER3 DNA MER1_type -9 200 1 193 310 178 30 chr17 75454548 75454851 -9983629 - L2 LINE L2 -1639 1675 1328 199 306 0 0 chr17 75455030 75455079 -9983401 + L2 LINE L2 3224 3272 0 717 22 0 0 chr17 75455248 75455337 -9983143 + L1PA3 LINE L1 6067 6155 0 819 284 23 38 chr17 75456139 75456403 -9982077 - MIR SINE MIR -2 260 1 319 233 27 14 chr17 75457389 75457535 -9980945 + CT-rich Low_complexity Low_complexity 2 149 0 767 320 39 0 chr17 75457994 75458228 -9980252 + MIR SINE MIR 18 260 -2 4087 88 5 25 chr17 75458983 75459363 -9979117 + MER41A LTR ERV1 1 368 -186 2473 74 0 0 chr17 75459363 75459673 -9978807 + AluSg SINE Alu 1 310 0 4087 88 5 25 chr17 75459673 75459857 -9978623 + MER41A LTR ERV1 368 554 0 785 315 20 50 chr17 75459971 75460428 -9978052 + L3 LINE CR1 564 1006 -571 315 158 12 24 chr17 75461196 75461278 -9977202 + CT-rich Low_complexity Low_complexity 4 84 0 1059 139 0 0 chr17 75461286 75461303 -9977177 + (TTC)n Simple_repeat Simple_repeat 1 197 0 1059 139 0 0 chr17 75461303 75461483 -9976997 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1326 78 0 0 chr17 75461540 75461720 -9976760 + (TTC)n Simple_repeat Simple_repeat 1 180 0 468 338 118 40 chr17 75462447 75462974 -9975506 - L2 LINE L2 -409 2905 2338 251 246 33 0 chr17 75463393 75463454 -9975026 + GA-rich Low_complexity Low_complexity 1 63 0 180 342 9 54 chr17 75463456 75463567 -9974913 - L2 LINE L2 -410 2904 2799 212 294 105 56 chr17 75464982 75465125 -9973355 + MIR SINE MIR 104 253 -9 532 309 51 28 chr17 75465567 75465745 -9972735 + LTR16B LTR ERVL 9 190 -274 2225 86 3 0 chr17 75465932 75466274 -9972206 + AluSp SINE Alu 2 313 0 1713 167 3 19 chr17 75466287 75466598 -9971882 + AluJo SINE Alu 1 306 -6 254 236 18 0 chr17 75466600 75466655 -9971825 + LTR16B LTR ERVL 409 464 0 457 256 141 25 chr17 75466944 75467143 -9971337 + MIR SINE MIR 22 243 -19 248 228 0 13 chr17 75468694 75468773 -9969707 + CT-rich Low_complexity Low_complexity 4 81 0 235 184 0 0 chr17 75468776 75468814 -9969666 - MIR SINE MIR -7 255 218 1127 121 0 0 chr17 75469626 75469800 -9968680 - AluSq SINE Alu 0 313 140 946 136 0 0 chr17 75469801 75469941 -9968539 - AluSq SINE Alu -134 179 40 628 186 39 16 chr17 75470034 75470163 -9968317 + MER20 DNA MER1_type 38 169 -50 279 299 13 0 chr17 75472177 75472254 -9966226 + L2 LINE L2 3184 3261 -11 2645 236 94 7 chr17 75473559 75474249 -9964231 + L1ME2 LINE L1 5415 6164 0 2235 96 0 0 chr17 75475156 75475483 -9962997 + AluSx SINE Alu 1 312 0 862 124 0 0 chr17 75476060 75476181 -9962299 - FLAM_A SINE Alu -12 121 1 189 0 0 0 chr17 75476624 75476645 -9961835 + (T)n Simple_repeat Simple_repeat 1 21 0 664 321 89 36 chr17 75476716 75477192 -9961288 - L2 LINE L2 -4 3309 2799 1045 198 37 5 chr17 75477192 75477409 -9961071 - MER58A DNA MER1_type 0 224 1 664 321 89 36 chr17 75477409 75477531 -9960949 - L2 LINE L2 -514 2799 2685 623 298 57 0 chr17 75477616 75477822 -9960658 + MIR SINE MIR 22 247 -15 737 315 229 20 chr17 75477884 75478491 -9959989 + L3 LINE CR1 807 1540 -37 224 237 132 26 chr17 75478937 75479013 -9959467 + L2 LINE L2 3165 3248 -65 236 158 0 0 chr17 75479603 75479641 -9958839 - L2 LINE L2 -15 3298 3261 630 218 0 83 chr17 75479719 75479912 -9958568 - MER69A DNA AcHobo 0 177 1 290 382 28 0 chr17 75480402 75480546 -9957934 - MER5A DNA MER1_type -2 187 40 188 297 44 55 chr17 75480567 75480658 -9957822 - MIR SINE MIR -86 176 87 244 216 0 0 chr17 75481020 75481071 -9957409 + L2 LINE L2 3218 3268 -4 24 32 0 0 chr17 75482379 75482410 -9956070 + AT_rich Low_complexity Low_complexity 1 31 0 210 37 0 0 chr17 75482574 75482601 -9955879 + (CA)n Simple_repeat Simple_repeat 2 28 0 21 71 0 0 chr17 75482794 75482836 -9955644 + AT_rich Low_complexity Low_complexity 1 42 0 27 49 0 0 chr17 75482926 75482967 -9955513 + AT_rich Low_complexity Low_complexity 1 41 0 186 191 0 0 chr17 75483968 75484015 -9954465 + A-rich Low_complexity Low_complexity 1 47 0 333 265 0 0 chr17 75484501 75484618 -9953862 + (CGG)n Simple_repeat Simple_repeat 3 119 0 22 0 0 0 chr17 75485944 75485966 -9952514 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr17 75487630 75487654 -9950826 + (GGGGA)n Simple_repeat Simple_repeat 2 25 0 234 128 0 0 chr17 75487791 75487830 -9950650 + (TG)n Simple_repeat Simple_repeat 2 40 0 200 246 0 18 chr17 75491154 75491211 -9947269 + L2 LINE L2 3258 3313 0 203 116 0 47 chr17 75492874 75492917 -9945563 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 2144 123 0 7 chr17 75495055 75495400 -9943080 + AluSx SINE Alu 1 312 0 216 355 85 24 chr17 75495684 75495932 -9942548 + L2 LINE L2 3010 3272 0 1846 176 0 7 chr17 75496128 75496429 -9942051 - AluJb SINE Alu -13 299 1 249 203 34 0 chr17 75497196 75497255 -9941225 + GA-rich Low_complexity Low_complexity 1 61 0 202 324 0 29 chr17 75497922 75498024 -9940456 - MIR SINE MIR -109 153 55 2229 92 0 48 chr17 75498630 75498946 -9939534 - AluSx SINE Alu -10 302 2 380 281 29 29 chr17 75498979 75499150 -9939330 - MIR SINE MIR -21 241 71 2053 107 0 58 chr17 75499453 75499614 -9938866 - AluSx SINE Alu -20 292 156 387 0 0 0 chr17 75499614 75499657 -9938823 + (TG)n Simple_repeat Simple_repeat 2 44 0 2053 107 0 58 chr17 75499657 75499805 -9938675 - AluSx SINE Alu -156 156 1 22 0 0 0 chr17 75501673 75501695 -9936785 + AT_rich Low_complexity Low_complexity 1 22 0 205 262 49 0 chr17 75502176 75502237 -9936243 + MIR SINE MIR 85 148 -60 2377 90 0 3 chr17 75502458 75502759 -9935721 + AluSc SINE Alu 3 302 -7 716 147 9 0 chr17 75503004 75503113 -9935367 - FLAM_A SINE Alu -18 124 15 284 272 70 9 chr17 75506010 75506124 -9932356 + MIR SINE MIR 136 256 -6 1804 161 60 133 chr17 75508631 75509135 -9929345 + MLT1C LTR MaLR 1 467 0 227 337 22 0 chr17 75509846 75509938 -9928542 - MIR3 SINE MIR -23 185 92 2131 115 57 31 chr17 75510077 75510426 -9928054 + THE1B LTR MaLR 1 358 -6 249 268 24 12 chr17 75510613 75510695 -9927785 - MIR SINE MIR -127 135 53 430 260 15 80 chr17 75512387 75512587 -9925893 - L2 LINE L2 -213 3059 2873 287 218 77 0 chr17 75513306 75513384 -9925096 + MIR SINE MIR 82 165 -97 201 256 0 0 chr17 75513732 75513775 -9924705 + (ATG)n Simple_repeat Simple_repeat 2 44 0 635 296 6 6 chr17 75513821 75514000 -9924480 - MIR SINE MIR -52 210 32 309 320 64 44 chr17 75514283 75514600 -9923880 - L2 LINE L2 -271 3001 2683 1684 169 63 3 chr17 75516038 75516322 -9922158 - AluJb SINE Alu -11 301 1 2434 81 50 31 chr17 75516833 75517190 -9921290 + THE1B LTR MaLR 1 364 0 594 242 115 6 chr17 75517722 75517879 -9920601 + MER96 DNA MER1_type 1 174 -1 22 70 0 0 chr17 75517881 75517924 -9920556 + AT_rich Low_complexity Low_complexity 1 43 0 592 283 48 21 chr17 75517924 75518160 -9920320 - MIR SINE MIR 0 262 22 704 271 186 15 chr17 75518413 75518682 -9919798 - L2 LINE L2 0 3313 2999 202 203 14 14 chr17 75519716 75519785 -9918695 + GA-rich Low_complexity Low_complexity 4 72 0 377 237 9 35 chr17 75519843 75519957 -9918523 + MIR SINE MIR 30 140 -68 1915 166 46 0 chr17 75520256 75520582 -9917898 + MLT2C1 LTR ERVL 1 341 -56 269 189 5 114 chr17 75520611 75520812 -9917668 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 33 66 0 0 chr17 75520817 75520878 -9917602 + AT_rich Low_complexity Low_complexity 1 61 0 197 49 49 98 chr17 75520916 75520977 -9917503 + (TTATA)n Simple_repeat Simple_repeat 1 58 0 1038 50 0 0 chr17 75521017 75521158 -9917322 + (TA)n Simple_repeat Simple_repeat 2 142 0 290 66 8 0 chr17 75521158 75521202 -9917278 + MLT2C1 LTR ERVL 362 397 0 354 123 0 0 chr17 75522457 75522514 -9915966 + (CA)n Simple_repeat Simple_repeat 1 57 0 650 267 120 30 chr17 75522961 75523473 -9915007 + MLT1L LTR MaLR 11 615 0 378 0 0 0 chr17 75523650 75523692 -9914788 + (CA)n Simple_repeat Simple_repeat 2 43 0 2821 123 8 43 chr17 75524955 75525444 -9913036 - L1MC1 LINE L1 -8 6325 5854 475 345 18 0 chr17 75526491 75526656 -9911824 + LTR33 LTR ERVL 93 260 -261 381 220 153 8 chr17 75526748 75526866 -9911614 + LTR33 LTR ERVL 379 513 -8 238 40 0 80 chr17 75527044 75527094 -9911386 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 2902 99 15 5 chr17 75527102 75527514 -9910966 - L1PA10 LINE L1 -29 6139 5724 1857 245 19 12 chr17 75527690 75528175 -9910305 + Charlie4a DNA MER1_type 21 508 0 5648 43 1 0 chr17 75529444 75530110 -9908370 - L1PA5 LINE L1 -6 6148 5482 1057 289 99 53 chr17 75530175 75530844 -9907636 - LTR50 LTR ERVL 0 795 10 215 348 115 35 chr17 75531341 75531680 -9906800 - L2 LINE L2 -10 3262 2897 479 169 24 97 chr17 75533483 75533607 -9904873 + MER20 DNA MER1_type 105 219 0 450 300 68 29 chr17 75535313 75535726 -9902754 - L1ME4a LINE L1 -4 6117 5689 281 307 0 69 chr17 75537387 75537488 -9900992 - L3 LINE CR1 -1 1576 1483 306 220 22 33 chr17 75537613 75537704 -9900776 + L1MC4 LINE L1 6614 6703 -1339 213 39 0 0 chr17 75537704 75537730 -9900750 + (GA)n Simple_repeat Simple_repeat 2 27 0 738 269 60 28 chr17 75538008 75538257 -9900223 - MIR SINE MIR 0 262 6 2159 113 33 3 chr17 75538986 75539286 -9899194 - AluSg SINE Alu -1 309 1 2408 83 0 7 chr17 75539875 75540176 -9898304 + AluY SINE Alu 1 299 -12 272 273 75 43 chr17 75540609 75540770 -9897710 - L1ME3A LINE L1 0 6170 6005 707 253 85 85 chr17 75540813 75541107 -9897373 - MLT1I LTR MaLR -45 364 68 2834 94 8 0 chr17 75541107 75541468 -9897012 + THE1B LTR MaLR 1 364 0 707 253 85 85 chr17 75541468 75541537 -9896943 - MLT1I LTR MaLR -340 69 1 256 284 108 0 chr17 75541539 75541641 -9896839 + MIR SINE MIR 32 144 -118 2805 109 40 24 chr17 75541658 75541776 -9896704 + MSTA LTR MaLR 1 116 -312 1764 137 108 40 chr17 75541776 75542127 -9896353 + THE1C LTR MaLR 1 375 0 2805 109 40 24 chr17 75542127 75542429 -9896051 + MSTA LTR MaLR 116 428 0 2760 94 40 0 chr17 75542461 75542811 -9895669 + THE1B LTR MaLR 1 364 0 960 195 25 0 chr17 75543915 75544074 -9894406 + FRAM SINE Alu 2 164 -2 280 179 0 36 chr17 75544743 75544799 -9893681 - MER45C DNA AcHobo 0 953 900 497 276 230 0 chr17 75544818 75545014 -9893466 - MER45C DNA AcHobo -365 588 348 422 351 42 5 chr17 75545014 75545205 -9893275 + MIR SINE MIR 65 262 0 180 111 0 0 chr17 75545409 75545436 -9893044 + (CA)n Simple_repeat Simple_repeat 2 28 0 448 284 18 9 chr17 75546013 75546122 -9892358 + MIR SINE MIR 34 143 -65 1497 193 7 7 chr17 75546281 75546550 -9891930 - L1PB4 LINE L1 0 6156 5888 2038 129 0 0 chr17 75546842 75547120 -9891360 - AluSg SINE Alu -24 286 9 1127 175 142 0 chr17 75547123 75547369 -9891111 + MER63 DNA MER1_type 12 292 -769 1818 151 21 3 chr17 75547391 75547675 -9890805 + AluSx SINE Alu 1 289 -23 380 97 16 0 chr17 75547675 75547737 -9890743 + (GA)n Simple_repeat Simple_repeat 1 63 0 886 156 0 0 chr17 75547737 75547865 -9890615 + AluSg/x SINE Alu 162 289 -23 380 97 16 0 chr17 75547865 75547927 -9890553 + (GA)n Simple_repeat Simple_repeat 1 63 0 939 132 0 0 chr17 75547927 75548233 -9890247 + AluSg/x SINE Alu 162 467 0 2581 225 41 21 chr17 75548233 75548838 -9889642 + MER63 DNA MER1_type 444 1060 0 233 247 290 0 chr17 75548893 75548986 -9889494 - L2 LINE L2 -21 3292 3173 2002 120 41 0 chr17 75549077 75549369 -9889111 - AluSq SINE Alu -9 304 1 348 24 0 0 chr17 75550647 75550688 -9887792 + (TC)n Simple_repeat Simple_repeat 1 41 0 24 0 0 0 chr17 75552109 75552133 -9886347 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 75552991 75553012 -9885468 + AT_rich Low_complexity Low_complexity 1 21 0 327 25 0 0 chr17 75554170 75554210 -9884270 + (TG)n Simple_repeat Simple_repeat 1 40 0 24 0 0 0 chr17 75555050 75555074 -9883406 + AT_rich Low_complexity Low_complexity 1 24 0 3268 67 0 0 chr17 75556125 75556513 -9881967 - L1PA6 LINE L1 -1 6153 5766 22 0 0 0 chr17 75556513 75556535 -9881945 + AT_rich Low_complexity Low_complexity 1 22 0 3060 211 42 2 chr17 75556535 75557179 -9881301 - L1MC3 LINE L1 -8 7777 7108 644 272 81 69 chr17 75557219 75557499 -9880981 - L1MC3 LINE L1 -1920 5888 5602 2485 74 0 6 chr17 75557499 75557811 -9880669 - AluY SINE Alu -1 310 1 644 272 81 69 chr17 75557811 75557890 -9880590 - L1MC3 LINE L1 -2206 5602 5525 2369 89 20 0 chr17 75558736 75559039 -9879441 - AluSg SINE Alu -1 309 1 2010 206 25 11 chr17 75559198 75559557 -9878923 - MLT1A1 LTR MaLR 0 365 2 182 191 146 91 chr17 75559876 75559986 -9878494 - MIR3 SINE MIR -86 122 7 566 281 19 57 chr17 75560032 75560103 -9878377 - MIR SINE MIR -2 260 188 2236 100 30 0 chr17 75560103 75560404 -9878076 - AluSg SINE Alu 0 310 1 566 281 19 57 chr17 75560404 75560542 -9877938 - MIR SINE MIR -74 188 59 750 200 21 42 chr17 75560701 75560891 -9877589 - MER53 DNA DNA 0 189 4 281 234 78 117 chr17 75562364 75562492 -9875988 - MIR SINE MIR -10 252 130 2148 146 143 13 chr17 75562763 75563141 -9875339 + MSTA LTR MaLR 1 427 -1 2110 86 1 0 chr17 75564182 75564490 -9873990 - L1PA10 LINE L1 -207 5924 5614 1486 25 0 0 chr17 75564490 75564650 -9873830 + L1PA10 LINE L1 6006 6167 -1 219 295 78 85 chr17 75564674 75564803 -9873677 - L2 LINE L2 -4 3268 3141 727 175 30 90 chr17 75565551 75565717 -9872763 + MER20 DNA MER1_type 1 156 -63 609 253 61 35 chr17 75565893 75566122 -9872358 - L1MC/D LINE L1 -1992 5816 5582 207 0 0 0 chr17 75566152 75566175 -9872305 + (T)n Simple_repeat Simple_repeat 1 23 0 282 295 38 52 chr17 75566266 75566403 -9872077 + MER5B DNA MER1_type 1 148 -41 354 304 58 53 chr17 75566906 75567149 -9871331 - MIR SINE MIR -16 246 3 980 182 17 93 chr17 75568057 75568293 -9870187 + MER20 DNA MER1_type 1 218 -1 281 267 27 0 chr17 75568314 75568389 -9870091 - MIR SINE MIR -69 193 117 227 355 28 35 chr17 75569424 75569565 -9868915 - L2 LINE L2 -5 3308 3169 1967 277 45 31 chr17 75569588 75570169 -9868311 - MLT1E LTR MaLR -1 592 4 2161 132 0 0 chr17 75570217 75570521 -9867959 + AluSc SINE Alu 2 305 -4 2367 125 62 9 chr17 75570833 75571258 -9867222 - Tigger2 DNA MER2_type 0 2718 1 674 218 77 64 chr17 75571392 75571612 -9866868 + MER58B DNA MER1_type 1 223 -118 2113 176 0 19 chr17 75571614 75571713 -9866767 + MLT1A1 LTR MaLR 3 102 -263 2349 110 56 31 chr17 75571713 75572068 -9866412 + THE1B LTR MaLR 1 364 0 2113 176 0 19 chr17 75572068 75572338 -9866142 + MLT1A1 LTR MaLR 102 365 0 611 183 17 9 chr17 75572338 75572452 -9866028 + MER58B DNA MER1_type 219 333 -8 937 50 158 0 chr17 75572653 75572773 -9865707 - MER85 DNA T2_type 0 139 1 1103 143 32 0 chr17 75573348 75573537 -9864943 - L1MA4A LINE L1 -11 6292 6098 189 0 0 0 chr17 75574206 75574227 -9864253 + (T)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr17 75574779 75574811 -9863669 + (CA)n Simple_repeat Simple_repeat 2 33 0 1591 180 0 4 chr17 75575674 75575929 -9862551 + AluJo SINE Alu 25 278 -34 189 196 0 0 chr17 75577302 75577348 -9861132 + (TGGG)n Simple_repeat Simple_repeat 4 49 0 2213 108 0 0 chr17 75579974 75580271 -9858209 + AluY SINE Alu 1 297 -14 330 109 76 0 chr17 75580273 75580392 -9858088 + (TA)n Simple_repeat Simple_repeat 1 128 0 2466 118 11 3 chr17 75586641 75587014 -9851466 - L1P4 LINE L1 -459 5702 5327 2982 123 57 0 chr17 75587036 75587476 -9851004 + L1PA14 LINE L1 5696 6160 -1 292 231 106 29 chr17 75587673 75587721 -9850759 - MER81 DNA DNA -1 113 70 2452 124 28 3 chr17 75587721 75588076 -9850404 + THE1B LTR MaLR 1 364 0 292 231 106 29 chr17 75588076 75588131 -9850349 - MER81 DNA DNA -44 70 2 257 322 0 0 chr17 75588132 75588219 -9850261 + MIR SINE MIR 176 262 0 417 95 48 119 chr17 75588552 75588596 -9849884 - MADE1 DNA Mariner -2 78 41 2376 82 0 0 chr17 75588596 75588887 -9849593 + AluY SINE Alu 1 291 -20 417 95 48 119 chr17 75588887 75588926 -9849554 - MADE1 DNA Mariner -39 41 1 570 268 48 9 chr17 75588994 75589197 -9849283 - MIR SINE MIR -41 221 11 203 325 0 60 chr17 75589167 75589284 -9849196 + MIR SINE MIR 105 214 -48 * 319 307 79 0 chr17 75590473 75590600 -9847880 - MIR SINE MIR -32 230 94 383 200 0 63 chr17 75591046 75591128 -9847352 - MLT1I LTR MaLR -28 381 304 2299 116 21 32 chr17 75591128 75591507 -9846973 + THE1C LTR MaLR 1 375 0 383 200 0 63 chr17 75591507 75591519 -9846961 - MLT1I LTR MaLR -105 304 293 622 336 40 4 chr17 75591554 75591831 -9846649 - MLT1I LTR MaLR -120 289 3 22 0 0 0 chr17 75592798 75592820 -9845660 + AT_rich Low_complexity Low_complexity 1 22 0 3861 63 0 2 chr17 75593670 75594146 -9844334 - L1PA6 LINE L1 -7 6147 5673 2066 116 7 7 chr17 75594841 75595151 -9843329 + AluSg SINE Alu 1 310 0 301 268 158 12 chr17 75595517 75595681 -9842799 - HAL1 LINE L1 -1206 1301 1114 249 365 0 24 chr17 75597146 75597231 -9841249 + MIR SINE MIR 42 124 -84 2079 178 146 25 chr17 75597566 75598054 -9840426 - MLT1E2 LTR MaLR 0 626 80 442 300 7 0 chr17 75597945 75598085 -9840395 - MLT2C1 LTR ERVL -204 193 53 * 393 39 0 0 chr17 75598938 75598989 -9839491 + (TC)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr17 75598988 75599031 -9839449 + (TA)n Simple_repeat Simple_repeat 1 43 0 * 5355 109 40 8 chr17 75601286 75602113 -9836367 - L1PA13 LINE L1 -5 6158 5309 2381 105 65 3 chr17 75602142 75602495 -9835985 + THE1C LTR MaLR 1 375 0 1865 160 29 3 chr17 75602853 75603197 -9835283 - L1MB3 LINE L1 0 6183 5831 2368 91 3 7 chr17 75603406 75603715 -9834765 - MLT2A2 LTR ERVL -145 308 1 2176 105 7 0 chr17 75603729 75604034 -9834446 - AluSx SINE Alu -5 307 1 391 185 22 33 chr17 75604127 75604219 -9834261 + LTR33 LTR ERVL 430 520 -1 1686 202 31 8 chr17 75604668 75605024 -9833456 + MLT1A1 LTR MaLR 1 364 -1 1315 181 13 0 chr17 75605192 75605429 -9833051 - Tigger2 DNA MER2_type -1 2717 2478 271 31 0 0 chr17 75605430 75605462 -9833018 + L1P4 LINE L1 5609 5640 -526 1908 190 74 0 chr17 75605474 75605797 -9832683 + MLT2C2 LTR ERVL 75 429 -35 641 76 34 0 chr17 75605797 75605915 -9832565 + (TCTA)n Simple_repeat Simple_repeat 1 122 0 1908 190 74 0 chr17 75605915 75605954 -9832526 + MLT2C2 LTR ERVL 429 464 0 185 263 74 63 chr17 75607795 75607890 -9830590 - MIR SINE MIR -151 111 16 688 256 72 14 chr17 75608773 75608980 -9829500 - MIR SINE MIR -1 261 43 1831 94 44 44 chr17 75611462 75611760 -9826720 - AluSq SINE Alu -15 298 1 488 156 18 114 chr17 75611948 75612115 -9826365 - MLT1B LTR MaLR -76 314 164 313 238 99 10 chr17 75612131 75612232 -9826248 - L1MDa LINE L1 -4037 2503 2394 705 157 0 0 chr17 75612237 75612352 -9826128 - L1MA5A LINE L1 -10 6287 6173 560 189 0 0 chr17 75612352 75612458 -9826022 - MLT1B LTR MaLR -212 178 73 296 238 95 9 chr17 75612724 75612829 -9825651 - MIR SINE MIR -61 201 88 1901 117 76 0 chr17 75613463 75613753 -9824727 - AluSx SINE Alu 0 312 1 901 273 52 67 chr17 75613754 75614325 -9824155 + L1MC4 LINE L1 7251 7813 -229 1248 186 67 8 chr17 75614329 75614420 -9824060 + AluJb SINE Alu 27 111 -201 297 0 0 0 chr17 75614420 75614453 -9824027 + (CA)n Simple_repeat Simple_repeat 2 34 0 1248 186 67 8 chr17 75614453 75614614 -9823866 + AluJb SINE Alu 111 294 -18 380 250 20 0 chr17 75614614 75614714 -9823766 + L1MD3 LINE L1 7886 7987 -8 269 307 57 14 chr17 75614879 75615019 -9823461 + L2 LINE L2 2910 3055 -217 1244 229 103 32 chr17 75615076 75615409 -9823071 + MLT1I LTR MaLR 1 366 -43 2126 123 70 20 chr17 75615409 75615766 -9822714 + THE1C LTR MaLR 1 375 0 1244 229 103 32 chr17 75615766 75615812 -9822668 + MLT1I LTR MaLR 366 407 -2 313 310 40 0 chr17 75615819 75615919 -9822561 + L2 LINE L2 2933 3036 -236 311 243 107 19 chr17 75615971 75616074 -9822406 - L2 LINE L2 -6 3307 3196 224 238 209 29 chr17 75616100 75616205 -9822275 + L2 LINE L2 3181 3304 -9 252 317 63 14 chr17 75616573 75616715 -9821765 + MIR3 SINE MIR 20 168 -40 195 233 0 0 chr17 75619036 75619079 -9819401 + MIR SINE MIR 220 262 0 291 286 0 0 chr17 75619184 75619268 -9819212 + (TG)n Simple_repeat Simple_repeat 1 84 0 218 280 0 0 chr17 75619908 75619958 -9818522 + L2 LINE L2 3004 3053 -219 214 333 0 0 chr17 75620411 75620465 -9818015 + MIR SINE MIR 2 55 -207 869 223 36 0 chr17 75620470 75620663 -9817817 - MER3 DNA MER1_type -7 202 3 393 252 164 38 chr17 75620680 75620839 -9817641 + MIR SINE MIR 82 260 -2 557 165 10 19 chr17 75622136 75622239 -9816241 - MER58 DNA MER1_type 0 2420 2319 520 232 0 0 chr17 75622237 75622336 -9816144 - MER58 DNA MER1_type -2321 99 1 * 245 329 25 13 chr17 75622380 75622459 -9816021 - L2 LINE L2 -15 3257 3178 536 236 47 0 chr17 75622661 75622788 -9815692 - MER3 DNA MER1_type -24 185 53 362 318 29 6 chr17 75622788 75623018 -9815462 + GA-rich Low_complexity Low_complexity 1 235 0 242 215 108 43 chr17 75623320 75623413 -9815067 - MIR SINE MIR -80 182 84 1010 216 0 0 chr17 75623578 75623768 -9814712 - MER3 DNA MER1_type -19 190 1 186 191 0 0 chr17 75624240 75624282 -9814198 + G-rich Low_complexity Low_complexity 2 43 0 232 241 0 0 chr17 75624630 75624684 -9813796 + (TG)n Simple_repeat Simple_repeat 2 55 0 294 29 0 0 chr17 75624684 75624719 -9813761 + (CA)n Simple_repeat Simple_repeat 2 36 0 272 328 61 0 chr17 75625967 75626098 -9812382 + L2 LINE L2 1276 1414 -1900 336 300 25 33 chr17 75626153 75626273 -9812207 + MIR3 SINE MIR 45 163 -45 351 315 99 51 chr17 75626416 75626768 -9811712 + L2 LINE L2 1527 1895 -1419 215 291 135 57 chr17 75627159 75627403 -9811077 + L2 LINE L2 2468 2730 -584 1400 169 23 8 chr17 75627576 75627836 -9810644 + AluJo SINE Alu 15 278 -34 180 0 0 0 chr17 75627839 75627859 -9810621 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 270 278 176 32 chr17 75627899 75628115 -9810365 + L2 LINE L2 2807 3053 -219 2222 110 0 0 chr17 75628423 75628731 -9809749 - AluSx SINE Alu -4 308 1 2408 69 0 0 chr17 75629165 75629471 -9809009 - AluY SINE Alu -5 306 1 198 167 0 0 chr17 75630021 75630057 -9808423 + (TA)n Simple_repeat Simple_repeat 2 37 0 239 272 0 11 chr17 75630057 75630132 -9808348 + L1MC4 LINE L1 6614 6689 -1353 2203 83 0 3 chr17 75630132 75630421 -9808059 - AluY SINE Alu -23 288 1 239 272 0 11 chr17 75630421 75630437 -9808043 + L1MC4 LINE L1 6689 6704 -1338 2737 163 36 2 chr17 75630736 75631184 -9807296 - LTR32 LTR ERVL 0 471 9 803 170 88 50 chr17 75631380 75631562 -9806918 - 7SLRNA srpRNA srpRNA -86 234 46 2215 89 34 12 chr17 75631569 75631895 -9806585 + L1PB2 LINE L1 5819 6151 0 329 264 0 46 chr17 75632151 75632238 -9806242 + L1MC4 LINE L1 6621 6703 -1339 900 201 0 0 chr17 75632240 75632399 -9806081 + MER58B DNA MER1_type 168 326 -15 1712 260 56 32 chr17 75632532 75633209 -9805271 - L1ME4a LINE L1 -69 6052 5358 324 230 40 14 chr17 75633211 75633285 -9805195 + L3b LINE CR1 1225 1300 -283 240 222 86 37 chr17 75633448 75633529 -9804951 - MIR SINE MIR -15 247 163 311 340 68 7 chr17 75634068 75634215 -9804265 + L2 LINE L2 3117 3272 0 235 284 64 28 chr17 75634388 75634497 -9803983 + L2 LINE L2 3197 3309 -4 310 232 105 21 chr17 75634857 75634952 -9803528 + L2 LINE L2 3211 3313 0 259 229 200 43 chr17 75635643 75635783 -9802697 + MIR SINE MIR 14 175 -87 272 337 85 0 chr17 75635820 75635934 -9802546 - MIR SINE MIR -85 123 30 321 257 126 27 chr17 75635959 75636101 -9802379 - MIR SINE MIR -73 135 20 668 278 12 6 chr17 75636269 75636438 -9802042 - MIR3 SINE MIR -3 205 36 268 268 67 67 chr17 75636852 75637016 -9801464 - MLT1K LTR MaLR -11 577 414 331 236 17 105 chr17 75637170 75637388 -9801092 + MLT1J2 LTR MaLR 246 436 -10 280 254 0 0 chr17 75637402 75637461 -9801019 - MLT1K LTR MaLR -170 418 360 366 192 64 0 chr17 75637510 75637588 -9800892 - MLT1K LTR MaLR -361 227 145 429 303 85 12 chr17 75637733 75637898 -9800582 + MIR SINE MIR 7 183 -79 187 238 100 25 chr17 75638281 75638361 -9800119 - L2 LINE L2 -728 2586 2501 399 394 32 9 chr17 75638633 75638849 -9799631 - MIR SINE MIR -34 228 8 2994 128 0 0 chr17 75639127 75639555 -9798925 + MSTA LTR MaLR 1 428 0 501 277 168 0 chr17 75639974 75640129 -9798351 - MER5A DNA MER1_type 0 189 9 2079 116 0 7 chr17 75640264 75640565 -9797915 + AluSq SINE Alu 1 299 -14 1705 126 9 93 chr17 75640567 75640901 -9797579 + AluSq SINE Alu 1 306 -7 620 212 146 6 chr17 75640993 75641158 -9797322 + MER5A DNA MER1_type 1 188 -1 242 280 238 21 chr17 75641181 75641324 -9797156 + MER5B DNA MER1_type 5 178 0 342 0 0 0 chr17 75642731 75642769 -9795711 + (TG)n Simple_repeat Simple_repeat 2 39 0 214 325 50 42 chr17 75642938 75643058 -9795422 + MIR3 SINE MIR 37 157 -51 611 278 107 0 chr17 75643293 75643462 -9795018 + MER5A DNA MER1_type 3 189 0 28 29 0 0 chr17 75644030 75644065 -9794415 + AT_rich Low_complexity Low_complexity 1 35 0 11071 166 37 24 chr17 75644108 75646277 -9792203 + L1MC3 LINE L1 5589 7785 0 184 154 0 0 chr17 75646441 75646467 -9792013 + L2 LINE L2 3197 3222 -91 263 298 114 8 chr17 75646479 75646610 -9791870 - L2 LINE L2 -200 3113 2969 977 196 5 5 chr17 75647553 75647737 -9790743 + MER20 DNA MER1_type 36 219 0 2315 93 0 3 chr17 75647768 75648079 -9790401 + AluSx SINE Alu 3 312 0 190 312 138 9 chr17 75648587 75648696 -9789784 + MIR SINE MIR 116 238 -24 1484 192 95 45 chr17 75648882 75649324 -9789156 - MLT1C LTR MaLR 0 467 4 2186 105 0 0 chr17 75649514 75649810 -9788670 - AluSq SINE Alu -17 296 1 548 282 138 52 chr17 75650671 75650782 -9787698 + L2 LINE L2 2919 3019 -294 1774 173 7 0 chr17 75650782 75651082 -9787398 + AluSx SINE Alu 1 302 -10 548 282 138 52 chr17 75651082 75651332 -9787148 + L2 LINE L2 3019 3311 -2 330 263 131 0 chr17 75652544 75652643 -9785837 - L2 LINE L2 0 3313 3202 894 311 61 9 chr17 75652796 75653160 -9785320 - L2 LINE L2 -164 3149 2768 2140 103 3 0 chr17 75653184 75653484 -9784996 + AluSx SINE Alu 5 305 -7 243 371 76 8 chr17 75653487 75653619 -9784861 + L2 LINE L2 3125 3265 -7 468 297 19 62 chr17 75654895 75655104 -9783376 + L2 LINE L2 3113 3312 -1 321 299 60 55 chr17 75655099 75655300 -9783180 - MIR SINE MIR -7 255 54 * 318 237 0 0 chr17 75655474 75655613 -9782867 + (CA)n Simple_repeat Simple_repeat 1 139 0 609 194 0 0 chr17 75655633 75655879 -9782601 + (CA)n Simple_repeat Simple_repeat 1 246 0 450 237 0 0 chr17 75655908 75656218 -9782262 + (CA)n Simple_repeat Simple_repeat 1 310 0 229 236 0 56 chr17 75656219 75656291 -9782189 + (CATA)n Simple_repeat Simple_repeat 3 70 0 288 226 0 0 chr17 75656313 75656406 -9782074 + (CA)n Simple_repeat Simple_repeat 1 93 0 351 265 0 0 chr17 75656495 75656646 -9781834 + (CA)n Simple_repeat Simple_repeat 1 151 0 367 282 51 37 chr17 75656845 75657036 -9781444 - MER5B DNA MER1_type 0 178 1 350 250 40 0 chr17 75657334 75657410 -9781070 - MER5B DNA MER1_type -99 79 1 1069 190 98 5 chr17 75657418 75657623 -9780857 - MER58A DNA MER1_type 0 224 1 333 241 40 103 chr17 75657655 75657829 -9780651 - MER5A DNA MER1_type -26 163 1 666 240 175 20 chr17 75658989 75659189 -9779291 - MIR SINE MIR 0 262 32 1378 175 128 79 chr17 75659670 75659858 -9778622 + MLT1C LTR MaLR 1 178 -289 2190 105 0 0 chr17 75659858 75660153 -9778327 - AluSg SINE Alu -15 295 1 1378 175 128 79 chr17 75660153 75660409 -9778071 + MLT1C LTR MaLR 178 467 0 415 293 38 45 chr17 75661045 75661178 -9777302 - L2 LINE L2 0 3272 3141 566 251 39 39 chr17 75661399 75661578 -9776902 - MER5A DNA MER1_type -9 180 2 2143 92 0 0 chr17 75661896 75662201 -9776279 + AluSc SINE Alu 1 305 0 228 327 158 0 chr17 75662503 75662604 -9775876 + MIR3 SINE MIR 82 198 -10 202 276 52 0 chr17 75663850 75663908 -9774572 - L2 LINE L2 -2 3311 3251 * 347 179 0 0 chr17 75663875 75663931 -9774549 - MIR SINE MIR -24 238 183 325 256 225 0 chr17 75665051 75665180 -9773300 + MIR SINE MIR 92 249 -13 330 22 22 0 chr17 75666337 75666382 -9772098 - MADE1 DNA Mariner 0 80 35 1238 176 36 36 chr17 75666562 75666841 -9771639 + AluJo SINE Alu 23 301 -11 989 334 130 50 chr17 75667158 75668282 -9770198 - L2 LINE L2 -337 2977 1945 1770 157 20 0 chr17 75668282 75668581 -9769899 + AluJb SINE Alu 2 306 -6 989 334 130 50 chr17 75668581 75669554 -9768926 - L2 LINE L2 -1369 1945 711 207 304 0 29 chr17 75669830 75669899 -9768581 - MIR SINE MIR -113 149 83 2076 71 21 94 chr17 75670288 75670627 -9767853 + AluYb8 SINE Alu 1 314 -4 198 248 179 60 chr17 75670707 75670824 -9767656 + L2 LINE L2 3138 3268 -4 286 334 146 0 chr17 75670953 75671119 -9767361 + MIR SINE MIR 17 203 -59 2061 119 0 10 chr17 75671603 75671905 -9766575 + AluSx SINE Alu 1 299 -13 182 354 162 10 chr17 75672099 75672198 -9766282 + L2 LINE L2 3189 3302 -11 285 193 0 0 chr17 75673790 75673847 -9764633 - L1MC4 LINE L1 0 8042 7986 1431 229 126 46 chr17 75673848 75674600 -9763880 - L1MC4 LINE L1 -143 7899 7209 2209 98 7 0 chr17 75674600 75674905 -9763575 - AluSp SINE Alu -6 307 1 1431 229 126 46 chr17 75674905 75675147 -9763333 - L1MC4 LINE L1 -833 7209 6988 309 89 0 0 chr17 75675147 75675192 -9763288 + (CA)n Simple_repeat Simple_repeat 1 45 0 1431 229 126 46 chr17 75675192 75675386 -9763094 - L1MC4 LINE L1 -1054 6988 6459 875 176 22 6 chr17 75677137 75677319 -9761161 + MER53 DNA DNA 2 186 -3 253 245 0 0 chr17 75677570 75677623 -9760857 - L2 LINE L2 -37 3235 3183 797 184 57 0 chr17 75677650 75677808 -9760672 + MER58B DNA MER1_type 170 336 -5 315 295 39 48 chr17 75678106 75678302 -9760178 - MIR SINE MIR -56 206 11 1999 149 29 47 chr17 75678302 75678645 -9759835 - MER1B DNA MER1_type 0 337 1 224 263 111 50 chr17 75678695 75678733 -9759747 + L2 LINE L2 3159 3193 -79 1039 202 28 0 chr17 75678733 75678946 -9759534 + MER20 DNA MER1_type 1 219 0 224 263 111 50 chr17 75678946 75679006 -9759474 + L2 LINE L2 3193 3263 -9 485 272 39 33 chr17 75679702 75679882 -9758598 + MIR SINE MIR 36 216 -46 1024 148 51 42 chr17 75679920 75680137 -9758343 - L1MA3 LINE L1 0 6305 6087 318 206 0 0 chr17 75680198 75680266 -9758214 + (CA)n Simple_repeat Simple_repeat 1 68 0 322 185 25 37 chr17 75680349 75680430 -9758050 + L1ME3A LINE L1 6090 6169 -1 3567 196 83 34 chr17 75680816 75681077 -9757403 + L1ME1 LINE L1 5212 5459 -707 2239 83 0 0 chr17 75681077 75681365 -9757115 + AluSg SINE Alu 1 288 -22 3567 196 83 34 chr17 75681365 75682022 -9756458 + L1ME1 LINE L1 5459 6161 -5 1660 160 0 17 chr17 75682358 75682652 -9755828 + AluJo SINE Alu 1 289 -23 393 232 85 61 chr17 75682809 75682973 -9755507 + MIR SINE MIR 92 259 -3 26 0 0 0 chr17 75682974 75683000 -9755480 + AT_rich Low_complexity Low_complexity 1 26 0 217 281 73 49 chr17 75683170 75683252 -9755228 + L2 LINE L2 3197 3280 -33 797 201 60 11 chr17 75683795 75683979 -9754501 - L1ME1 LINE L1 -58 6108 5916 2175 105 54 29 chr17 75684235 75684586 -9753894 - THE1B LTR MaLR 0 364 5 258 81 0 0 chr17 75684591 75684628 -9753852 - MSTA LTR MaLR -391 37 1 2188 195 35 67 chr17 75684628 75685197 -9753283 + MLT2B3 LTR ERVL 4 554 0 254 239 0 0 chr17 75685208 75685254 -9753226 - L2 LINE L2 -10 3303 3258 216 0 0 0 chr17 75685806 75685830 -9752650 + (TG)n Simple_repeat Simple_repeat 1 24 0 228 207 0 35 chr17 75686360 75686418 -9752062 - L2 LINE L2 0 3272 3217 374 291 34 8 chr17 75686476 75686593 -9751887 + MIR SINE MIR 17 136 -72 360 0 0 0 chr17 75687333 75687373 -9751107 + (TG)n Simple_repeat Simple_repeat 2 41 0 1863 147 10 3 chr17 75688031 75688331 -9750149 - AluJb SINE Alu -10 302 1 1524 158 58 10 chr17 75688822 75689114 -9749366 - AluJo SINE Alu -6 306 1 2194 91 0 0 chr17 75690303 75690624 -9747856 - AluSq SINE Alu 0 321 1 343 321 76 0 chr17 75690634 75690765 -9747715 - MIR SINE MIR -13 249 109 747 259 86 11 chr17 75691915 75692316 -9746164 + LTR33 LTR ERVL 54 521 0 475 324 7 7 chr17 75692317 75692453 -9746027 - MIR SINE MIR -98 164 29 470 309 78 18 chr17 75693293 75693510 -9744970 - MIR SINE MIR -1 261 32 305 248 192 48 chr17 75694198 75694323 -9744157 - MER5A DNA MER1_type -7 182 40 234 0 0 0 chr17 75695166 75695192 -9743288 + (T)n Simple_repeat Simple_repeat 1 26 0 228 281 158 22 chr17 75695369 75695508 -9742972 + MIR SINE MIR 104 261 -1 214 333 184 25 chr17 75696255 75697010 -9741470 + L2 LINE L2 1824 2698 -616 1562 248 16 77 chr17 75697172 75697716 -9740764 - MLT1J LTR MaLR 0 511 1 568 346 28 24 chr17 75697831 75698085 -9740395 + MIR SINE MIR 7 261 -1 21 0 0 0 chr17 75698433 75698454 -9740026 + AT_rich Low_complexity Low_complexity 1 21 0 2519 112 8 11 chr17 75698625 75698990 -9739490 + THE1B LTR MaLR 1 364 0 304 303 197 7 chr17 75699639 75699781 -9738699 - MIR SINE MIR -58 204 36 1418 148 70 0 chr17 75701284 75701527 -9736953 + AluJo SINE Alu 1 260 -52 188 0 74 0 chr17 75701759 75701786 -9736694 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 271 344 56 42 chr17 75702034 75702322 -9736158 - L2 LINE L2 -847 2467 2176 2373 67 3 0 chr17 75703231 75703531 -9734949 + AluY SINE Alu 1 301 -10 299 223 21 43 chr17 75703605 75703699 -9734781 + MER103 DNA DNA 20 111 -55 4834 61 0 7 chr17 75703805 75704414 -9734066 + L1PA7 LINE L1 5549 6153 -1 306 349 23 16 chr17 75705505 75705634 -9732846 - MIR SINE MIR -109 153 24 2244 125 131 5 chr17 75705641 75706016 -9732464 - MSTA LTR MaLR -6 422 1 2174 112 0 3 chr17 75707221 75707534 -9730946 + AluSx SINE Alu 1 312 0 244 284 161 0 chr17 75707719 75707800 -9730680 + 7SK RNA RNA 1 94 -99 1639 175 7 17 chr17 75708282 75708579 -9729901 - AluJo SINE Alu -18 294 1 314 292 69 79 chr17 75710124 75710326 -9728154 + MIR SINE MIR 22 221 -41 239 342 33 59 chr17 75711692 75711844 -9726636 - L2 LINE L2 -221 3051 2904 2054 132 0 0 chr17 75711870 75712173 -9726307 - AluSx SINE Alu -9 303 1 255 291 155 0 chr17 75712816 75712919 -9725561 - L2 LINE L2 0 3272 3154 374 243 39 39 chr17 75713516 75713619 -9724861 + L2 LINE L2 3211 3313 0 870 188 44 6 chr17 75714290 75714471 -9724009 + MER5A DNA MER1_type 2 189 0 322 262 8 103 chr17 75714532 75714658 -9723822 + MER5B DNA MER1_type 64 177 -1 307 261 162 35 chr17 75715056 75715198 -9723282 - MER5A DNA MER1_type 0 189 30 950 241 43 0 chr17 75715209 75715416 -9723064 - MER58A DNA MER1_type -8 216 1 209 35 35 88 chr17 75715471 75715528 -9722952 + (TTTTTG)n Simple_repeat Simple_repeat 2 55 0 377 258 68 68 chr17 75715528 75715660 -9722820 - MER5B DNA MER1_type -43 135 4 816 332 19 0 chr17 75715741 75716006 -9722474 + L2 LINE L2 2700 2969 -345 1316 209 236 52 chr17 75716013 75716496 -9721984 - MLT1G1 LTR MaLR -5 585 14 286 317 80 60 chr17 75716510 75716709 -9721771 + L2 LINE L2 2969 3171 -142 241 252 150 54 chr17 75717115 75717262 -9721218 - L2 LINE L2 -4 3309 3149 2095 99 0 38 chr17 75717318 75717631 -9720849 - AluSg SINE Alu -9 301 1 519 300 181 64 chr17 75717717 75718046 -9720434 - L2 LINE L2 -342 2972 2683 1728 153 7 14 chr17 75718046 75718340 -9720140 + AluJo SINE Alu 7 298 -14 519 300 181 64 chr17 75718340 75719009 -9719471 - L2 LINE L2 -631 2683 1857 199 256 0 34 chr17 75719066 75719125 -9719355 + L2 LINE L2 2990 3046 -267 2074 122 0 0 chr17 75719205 75719500 -9718980 + AluSx SINE Alu 1 295 -17 188 250 0 0 chr17 75719639 75719683 -9718797 + MIR SINE MIR 89 132 -76 426 232 97 10 chr17 75719954 75720106 -9718374 + MLT1F1 LTR MaLR 22 194 -373 248 175 18 18 chr17 75720106 75720163 -9718317 - MLT2D LTR ERVL 0 414 358 379 221 0 11 chr17 75720188 75720369 -9718111 + GA-rich Low_complexity Low_complexity 2 180 0 370 190 35 11 chr17 75720338 75720512 -9717968 + (CAGAGA)n Simple_repeat Simple_repeat 2 179 0 * 1820 202 23 18 chr17 75720519 75720910 -9717570 - MLT2D LTR ERVL -20 394 2 990 208 108 42 chr17 75720957 75721245 -9717235 + MLT1F1 LTR MaLR 259 565 -2 2018 135 108 18 chr17 75721386 75721720 -9716760 - THE1B LTR MaLR 0 364 1 1206 89 0 10 chr17 75723627 75723950 -9714530 + (TCCC)n Simple_repeat Simple_repeat 1 497 0 689 194 0 15 chr17 75723995 75724129 -9714351 - FLAM_C SINE Alu -10 133 2 424 248 9 9 chr17 75724215 75724328 -9714152 + MER53 DNA DNA 13 125 -64 471 106 30 0 chr17 75724580 75724646 -9713834 + MER20 DNA MER1_type 1 68 -151 1893 125 30 7 chr17 75724790 75725094 -9713386 + AluSp SINE Alu 2 312 -1 191 130 0 43 chr17 75726588 75726634 -9711846 + (TAG)n Simple_repeat Simple_repeat 1 44 0 441 240 20 10 chr17 75727097 75727197 -9711283 - L2 LINE L2 -1 3271 3171 510 226 75 85 chr17 75727802 75728001 -9710479 + MIR SINE MIR 63 259 -3 235 337 87 17 chr17 75728569 75728741 -9709739 + MIR SINE MIR 63 246 -16 995 151 0 24 chr17 75729007 75729173 -9709307 - AluSg/x SINE Alu -20 292 131 211 323 15 0 chr17 75729182 75729247 -9709233 - L2 LINE L2 -5 3308 3243 243 0 0 0 chr17 75729290 75729317 -9709163 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 910 206 6 22 chr17 75729541 75729721 -9708759 - MER58A DNA MER1_type -2 222 46 8258 187 72 84 chr17 75729721 75730889 -9707591 + L1MC3 LINE L1 4457 5638 -2147 1849 125 0 24 chr17 75730889 75731177 -9707303 + AluSx SINE Alu 11 291 -21 8258 187 72 84 chr17 75731177 75731842 -9706638 + L1MC3 LINE L1 5638 6310 -1475 2132 91 7 0 chr17 75731842 75732127 -9706353 + AluSx SINE Alu 1 287 -25 8258 187 72 84 chr17 75732127 75732761 -9705719 + L1MC3 LINE L1 6310 6950 -835 2251 89 0 13 chr17 75732761 75733074 -9705406 + AluY SINE Alu 2 310 -1 8258 187 72 84 chr17 75733074 75733207 -9705273 + L1MC3 LINE L1 6950 7083 -702 454 225 0 0 chr17 75733207 75733296 -9705184 + MLT1F1 LTR MaLR 37 125 -442 8258 187 72 84 chr17 75733296 75733439 -9705041 + L1MC3 LINE L1 7083 7226 -559 2219 111 3 0 chr17 75733439 75733745 -9704735 - AluSx SINE Alu -5 307 1 8258 187 72 84 chr17 75733745 75733785 -9704695 + L1MC3 LINE L1 7226 7265 -520 349 49 0 0 chr17 75733785 75733826 -9704654 + U1 snRNA snRNA 1 41 -124 8258 187 72 84 chr17 75733826 75734267 -9704213 + L1MC3 LINE L1 7265 7753 -32 246 231 13 90 chr17 75734268 75734346 -9704134 - MER58A DNA MER1_type -30 77 6 396 0 0 0 chr17 75734393 75734437 -9704043 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2077 94 0 0 chr17 75734437 75734714 -9703766 - AluSc SINE Alu -32 277 1 1510 181 9 44 chr17 75734792 75735113 -9703367 - AluJb SINE Alu -2 310 1 651 234 97 52 chr17 75735178 75735447 -9703033 - L1MC4a LINE L1 -1850 5958 5678 338 321 38 82 chr17 75735452 75735544 -9702936 + MER5B DNA MER1_type 27 111 -67 2048 139 0 0 chr17 75735544 75735847 -9702633 - AluSx SINE Alu -9 303 1 338 321 38 82 chr17 75735847 75735913 -9702567 + MER5B DNA MER1_type 111 178 0 399 253 28 71 chr17 75735948 75736130 -9702350 + MER5B DNA MER1_type 2 175 -3 487 209 75 30 chr17 75736719 75736853 -9701627 - MIR SINE MIR -121 141 2 195 69 0 0 chr17 75736972 75737001 -9701479 + (TA)n Simple_repeat Simple_repeat 1 29 0 181 219 73 0 chr17 75737055 75737096 -9701384 + L3 LINE CR1 594 637 -940 430 264 31 32 chr17 75737208 75737355 -9701125 - MIR SINE MIR -46 162 13 2151 92 0 7 chr17 75737995 75738288 -9700192 + AluY SINE Alu 1 291 -20 180 0 0 0 chr17 75739081 75739101 -9699379 + (T)n Simple_repeat Simple_repeat 1 20 0 2207 99 0 26 chr17 75742140 75742474 -9696006 + AluSx SINE Alu 1 312 0 486 229 122 0 chr17 75743479 75743610 -9694870 + MER5A DNA MER1_type 14 160 -29 2072 97 17 0 chr17 75743988 75744276 -9694204 + AluSc SINE Alu 1 293 -16 1561 253 47 22 chr17 75745020 75745470 -9693010 - L1ME3A LINE L1 0 6170 5710 7254 133 18 10 chr17 75745674 75747689 -9690791 + L1MA3 LINE L1 4273 6296 -9 24 0 0 0 chr17 75747690 75747714 -9690766 + AT_rich Low_complexity Low_complexity 1 24 0 183 80 0 0 chr17 75747734 75747759 -9690721 + (A)n Simple_repeat Simple_repeat 1 25 0 347 263 45 60 chr17 75748779 75748912 -9689568 + L3 LINE CR1 1440 1570 -7 2241 98 0 3 chr17 75749354 75749660 -9688820 + AluSc SINE Alu 1 305 -4 234 242 0 0 chr17 75749763 75749829 -9688651 + (TA)n Simple_repeat Simple_repeat 1 66 0 204 40 0 0 chr17 75749874 75749899 -9688581 + (TG)n Simple_repeat Simple_repeat 1 25 0 2050 130 58 3 chr17 75749899 75750229 -9688251 - MER7A DNA MER2_type 0 346 1 328 250 76 53 chr17 75750318 75750450 -9688030 - MIR SINE MIR -58 150 16 200 338 27 0 chr17 75750680 75750754 -9687726 + L2 LINE L2 3229 3304 -9 392 268 184 42 chr17 75751353 75751543 -9686937 - MIR SINE MIR -26 236 20 2291 60 0 13 chr17 75751937 75752277 -9686203 + AluSq SINE Alu 1 313 0 318 391 31 0 chr17 75752972 75753133 -9685347 - MIR SINE MIR -76 186 21 328 231 137 98 chr17 75753292 75753439 -9685041 + MIR SINE MIR 8 160 -48 332 282 24 57 chr17 75755542 75755666 -9682814 + MIR SINE MIR 88 207 -55 186 242 231 11 chr17 75755879 75755970 -9682510 - L2 LINE L2 -2 3270 3160 2018 130 0 0 chr17 75756187 75756480 -9682000 + AluSq SINE Alu 1 293 -20 461 338 65 27 chr17 75756692 75756955 -9681525 - L2 LINE L2 -528 2786 2514 1257 40 6 11 chr17 75757126 75757300 -9681180 + (TCTA)n Simple_repeat Simple_repeat 1 173 0 6772 47 4 0 chr17 75757802 75758618 -9679862 + L1PA5 LINE L1 5333 6151 -3 216 390 45 15 chr17 75758640 75758909 -9679571 - L2 LINE L2 -654 2660 2384 302 224 12 0 chr17 75759207 75759292 -9679188 + (TCCA)n Simple_repeat Simple_repeat 1 86 0 24 53 0 0 chr17 75759589 75759627 -9678853 + AT_rich Low_complexity Low_complexity 1 38 0 428 344 41 14 chr17 75760094 75760315 -9678165 - MLT1K LTR MaLR -37 551 325 2470 59 0 0 chr17 75761254 75761559 -9676921 - AluY SINE Alu -6 305 1 2240 89 3 25 chr17 75762056 75762371 -9676109 - AluSx SINE Alu -4 308 1 204 40 0 0 chr17 75763334 75763359 -9675121 + (TC)n Simple_repeat Simple_repeat 2 26 0 355 205 145 0 chr17 75763361 75763444 -9675036 + L1MC4 LINE L1 6614 6708 -1334 315 288 219 19 chr17 75763490 75763695 -9674785 + L2 LINE L2 2229 2474 -840 271 303 0 11 chr17 75763708 75763729 -9674751 + CT-rich Low_complexity Low_complexity 1 21 -67 1941 129 10 3 chr17 75763729 75764031 -9674449 - AluSg SINE Alu -3 307 4 271 303 0 11 chr17 75764031 75764098 -9674382 + CT-rich Low_complexity Low_complexity 21 88 0 1892 115 34 14 chr17 75764306 75764601 -9673879 + AluSq SINE Alu 1 301 -12 2257 127 33 30 chr17 75764632 75764993 -9673487 - THE1B LTR MaLR 0 364 3 597 268 153 10 chr17 75765013 75765283 -9673197 + L1ME4a LINE L1 5614 5859 -262 2250 78 7 0 chr17 75765585 75765880 -9672600 + AluSp SINE Alu 2 298 -15 1718 166 10 0 chr17 75765905 75766200 -9672280 - AluJb SINE Alu -14 298 1 2039 110 0 3 chr17 75766231 75766513 -9671967 + AluSq SINE Alu 1 281 -32 336 77 0 0 chr17 75767324 75767376 -9671104 + (TG)n Simple_repeat Simple_repeat 1 52 0 2209 83 0 0 chr17 75769065 75769343 -9669137 + AluSc SINE Alu 1 278 -31 180 0 0 0 chr17 75769346 75769366 -9669114 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 1560 177 29 26 chr17 75769596 75769907 -9668573 + AluJo SINE Alu 1 312 0 440 189 27 0 chr17 75770904 75771015 -9667465 + (CACCAT)n Simple_repeat Simple_repeat 4 117 0 912 169 0 0 chr17 75771023 75771201 -9667279 + (CCA)n Simple_repeat Simple_repeat 3 180 0 600 246 0 0 chr17 75771208 75771383 -9667097 + (CACCAT)n Simple_repeat Simple_repeat 5 179 0 * 795 207 0 6 chr17 75771350 75771831 -9666649 + (CCA)n Simple_repeat Simple_repeat 1 477 0 466 263 60 14 chr17 75772094 75772266 -9666214 + MIR SINE MIR 29 213 -49 225 132 0 0 chr17 75772294 75772332 -9666148 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 189 0 0 0 chr17 75773284 75773305 -9665175 + (T)n Simple_repeat Simple_repeat 1 21 0 298 314 188 18 chr17 75773307 75773530 -9664950 - MIR SINE MIR 0 262 2 697 154 18 0 chr17 75773661 75773771 -9664709 + AluJo SINE Alu 23 134 -178 856 214 0 0 chr17 75773827 75773972 -9664508 - FRAM SINE Alu -30 146 2 2354 71 0 10 chr17 75775660 75775968 -9662512 + AluSc SINE Alu 1 305 -4 851 265 0 55 chr17 75777204 75777461 -9661019 - MER102b DNA MER1_type 0 341 99 243 0 0 0 chr17 75779790 75779817 -9658663 + (T)n Simple_repeat Simple_repeat 1 27 0 387 0 0 0 chr17 75779960 75780003 -9658477 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr17 75782067 75782088 -9656392 + AT_rich Low_complexity Low_complexity 1 21 0 2160 80 0 51 chr17 75782107 75782420 -9656060 + AluSg SINE Alu 1 297 -13 759 153 0 0 chr17 75782424 75782542 -9655938 - FLAM_C SINE Alu -24 119 2 24 53 0 0 chr17 75782543 75782581 -9655899 + AT_rich Low_complexity Low_complexity 1 38 0 315 0 0 0 chr17 75783181 75783216 -9655264 + (CA)n Simple_repeat Simple_repeat 2 36 0 2345 87 0 3 chr17 75783481 75783793 -9654687 - AluSq SINE Alu -2 311 1 205 321 0 0 chr17 75785347 75785400 -9653080 - MIR SINE MIR -165 97 45 261 352 78 14 chr17 75785599 75785741 -9652739 + L2 LINE L2 3147 3297 -16 778 207 111 37 chr17 75786391 75786427 -9652053 - MIR SINE MIR -9 253 221 2811 62 8 0 chr17 75786427 75786779 -9651701 - THE1A LTR MaLR 0 355 1 778 207 111 37 chr17 75786779 75786959 -9651521 - MIR SINE MIR -41 221 21 1859 121 3 14 chr17 75788652 75788942 -9649538 - AluSx SINE Alu -25 287 1 182 371 30 30 chr17 75789191 75789423 -9649057 - L2 LINE L2 -470 2844 2613 265 314 23 0 chr17 75789460 75789546 -9648934 + MIR SINE MIR 47 134 -128 316 281 23 16 chr17 75789590 75789718 -9648762 - L2 LINE L2 -44 3269 3141 247 353 23 8 chr17 75789762 75789895 -9648585 - L2 LINE L2 -343 2970 2836 1568 188 7 0 chr17 75789944 75790242 -9648238 + AluJo SINE Alu 3 302 -10 255 114 0 0 chr17 75790276 75790320 -9648160 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 183 345 105 20 chr17 75790485 75790685 -9647795 - L2 LINE L2 -873 2441 2225 240 261 34 0 chr17 75791519 75791607 -9646873 - L1ME4a LINE L1 -69 6052 5962 188 293 17 0 chr17 75791831 75791889 -9646591 - MIR SINE MIR -97 165 107 2459 83 0 3 chr17 75791899 75792200 -9646280 + AluSq SINE Alu 1 300 -13 300 363 9 35 chr17 75792734 75792847 -9645633 + L1MC4 LINE L1 6597 6706 -1336 200 211 0 0 chr17 75793426 75793464 -9645016 + GA-rich Low_complexity Low_complexity 1 38 0 590 177 47 99 chr17 75794344 75794424 -9644056 + ORSL DNA AcHobo 14 97 -178 2246 108 30 0 chr17 75794424 75794719 -9643761 + AluSx SINE Alu 1 304 -8 590 177 47 99 chr17 75794719 75794870 -9643610 + ORSL DNA AcHobo 97 233 -42 275 294 22 11 chr17 75796055 75796147 -9642333 + MER5A DNA MER1_type 9 101 -88 449 235 32 118 chr17 75796171 75796358 -9642122 + MER5B DNA MER1_type 4 174 -4 243 341 0 24 chr17 75797453 75797535 -9640945 - MIR SINE MIR 0 262 183 446 287 90 11 chr17 75798244 75798432 -9640048 - MIR SINE MIR 0 262 60 210 71 0 0 chr17 75798953 75798981 -9639499 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 490 298 111 13 chr17 75799195 75799430 -9639050 + MIR SINE MIR 2 259 -3 274 209 136 45 chr17 75799453 75799563 -9638917 + MIR SINE MIR 77 196 -66 335 230 142 9 chr17 75800647 75800760 -9637720 - L2 LINE L2 0 3313 3186 1647 158 78 29 chr17 75800760 75801107 -9637373 - THE1B LTR MaLR 0 364 1 265 245 214 44 chr17 75801203 75801665 -9636815 - L2 LINE L2 -129 3184 2639 285 29 0 0 chr17 75801947 75801981 -9636499 + (A)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr17 75802988 75803009 -9635471 + (TG)n Simple_repeat Simple_repeat 1 21 0 32 26 0 0 chr17 75803992 75804031 -9634449 + AT_rich Low_complexity Low_complexity 1 39 0 342 209 36 109 chr17 75806010 75806120 -9632360 + MIR SINE MIR 81 182 -80 701 186 0 0 chr17 75806625 75806743 -9631737 - FLAM_A SINE Alu -15 118 1 324 359 68 15 chr17 75807059 75807265 -9631215 - L3 LINE CR1 -40 1537 1321 1215 209 67 14 chr17 75807427 75807709 -9630771 + AluJo SINE Alu 1 297 -15 1592 194 117 23 chr17 75807722 75808149 -9630331 + MLT1C LTR MaLR 1 467 0 1637 194 115 36 chr17 75808828 75809272 -9629208 - MLT1D LTR MaLR 0 505 27 192 77 0 0 chr17 75810052 75810078 -9628402 + (GA)n Simple_repeat Simple_repeat 1 26 0 2371 91 0 23 chr17 75811413 75811720 -9626760 + AluSc SINE Alu 1 300 -9 307 212 233 48 chr17 75811730 75811876 -9626604 - MIR SINE MIR -55 207 35 246 128 0 0 chr17 75812000 75812039 -9626441 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 2270 68 0 68 chr17 75813664 75813986 -9624494 + AluSq SINE Alu 1 300 -13 675 247 41 6 chr17 75815146 75815316 -9623164 - MER5B DNA MER1_type -1 177 2 664 227 44 71 chr17 75815325 75815550 -9622930 + MER20 DNA MER1_type 1 219 0 1001 196 22 0 chr17 75815559 75815743 -9622737 - MER5A DNA MER1_type -1 188 1 2135 115 31 0 chr17 75815824 75816112 -9622368 + AluSx SINE Alu 1 297 -15 1311 263 30 53 chr17 75816119 75816594 -9621886 - MLT1J LTR MaLR -43 468 5 493 244 135 0 chr17 75816633 75816789 -9621691 - MIR SINE MIR -16 246 70 298 130 0 0 chr17 75817008 75817054 -9621426 - MLT1D LTR MaLR -3 502 457 * 828 158 41 0 chr17 75817053 75817199 -9621281 + MER21A LTR ERV1 774 925 -6 1161 173 79 10 chr17 75817252 75817576 -9620904 - MER21B LTR ERV1 -339 524 158 929 189 85 39 chr17 75817577 75817957 -9620523 - MLT1D LTR MaLR -43 462 1 2778 139 106 19 chr17 75819097 75819609 -9618871 - MER21A LTR ERV1 0 931 376 1155 108 184 0 chr17 75819614 75819818 -9618662 - MER21A LTR ERV1 -667 264 14 423 0 0 0 chr17 75819818 75819865 -9618615 + (TG)n Simple_repeat Simple_repeat 2 48 0 1155 108 184 0 chr17 75819865 75819883 -9618597 - MER21A LTR ERV1 -917 14 1 203 303 61 0 chr17 75820160 75820226 -9618254 + L2 LINE L2 3205 3274 -39 2152 127 21 32 chr17 75820351 75820730 -9617750 + THE1C LTR MaLR 1 375 0 1779 142 3 51 chr17 75821623 75821940 -9616540 + AluJb SINE Alu 2 304 0 584 207 9 0 chr17 75823450 75823561 -9614919 + MER81 DNA DNA 2 113 -1 207 100 0 0 chr17 75823965 75823995 -9614485 + (CA)n Simple_repeat Simple_repeat 1 30 0 239 71 24 0 chr17 75824818 75824860 -9613620 + (TC)n Simple_repeat Simple_repeat 2 44 0 1508 157 49 30 chr17 75824862 75825129 -9613351 - AluJb SINE Alu -40 272 1 262 266 46 55 chr17 75825159 75825268 -9613212 - L3 LINE CR1 -5 1572 1465 249 267 23 70 chr17 75825509 75825595 -9612885 + MIR3 SINE MIR 120 201 -7 335 251 17 123 chr17 75826060 75826239 -9612241 + MIR3 SINE MIR 21 180 -28 2574 61 0 0 chr17 75827491 75827786 -9610694 - AluY SINE Alu -11 300 6 891 114 0 8 chr17 75827896 75828028 -9610452 - FLAM_C SINE Alu -2 131 1 1636 150 0 59 chr17 75828746 75829033 -9609447 + AluJb SINE Alu 35 304 -8 209 29 0 57 chr17 75829526 75829561 -9608919 + (TGGGGG)n Simple_repeat Simple_repeat 6 38 0 613 295 139 35 chr17 75829981 75830327 -9608153 - MLT1J2 LTR MaLR 0 450 69 431 324 131 5 chr17 75830582 75830804 -9607676 + MIR SINE MIR 2 251 -11 350 298 11 89 chr17 75834715 75834906 -9603574 + MIR SINE MIR 57 232 -30 2018 98 98 20 chr17 75835040 75835388 -9603092 + THE1C LTR MaLR 1 375 0 2104 140 3 13 chr17 75835853 75836168 -9602312 + AluSx SINE Alu 1 312 0 1735 205 174 7 chr17 75836376 75836806 -9601674 + MLT1D LTR MaLR 1 502 -3 287 320 13 58 chr17 75836920 75837076 -9601404 + MER91A DNA MER1_type 8 156 -40 790 188 21 107 chr17 75837383 75837537 -9600943 + MER20 DNA MER1_type 1 130 -89 2144 133 0 7 chr17 75837537 75837838 -9600642 + AluJb SINE Alu 1 299 -13 790 188 21 107 chr17 75837838 75837917 -9600563 + MER20 DNA MER1_type 130 214 -5 2365 116 0 0 chr17 75838747 75839057 -9599423 - AluSx SINE Alu -2 310 1 1491 165 142 0 chr17 75839736 75840003 -9598477 + AluSx SINE Alu 1 305 -7 420 216 85 119 chr17 75840639 75840875 -9597605 + L1MC4 LINE L1 7814 8041 -1 199 274 30 133 chr17 75840883 75840959 -9597521 - MER5B DNA MER1_type -49 129 71 1906 167 0 22 chr17 75840959 75841276 -9597204 - AluJb SINE Alu -2 310 1 199 274 30 133 chr17 75841276 75841334 -9597146 - MER5B DNA MER1_type -107 71 9 465 237 164 13 chr17 75841354 75841506 -9596974 - MER5A DNA MER1_type -6 183 9 770 181 11 96 chr17 75841554 75841701 -9596779 - MER5B DNA MER1_type 0 178 47 2442 67 7 0 chr17 75841701 75841999 -9596481 + AluY SINE Alu 1 300 -11 770 181 11 96 chr17 75841999 75842028 -9596452 - MER5B DNA MER1_type -131 47 17 719 224 147 26 chr17 75842221 75842453 -9596027 - MIR SINE MIR -2 260 1 967 232 34 0 chr17 75842471 75842678 -9595802 + MER58A DNA MER1_type 1 214 -10 2467 95 3 0 chr17 75844880 75845186 -9593294 + AluSp SINE Alu 1 307 -6 308 269 96 0 chr17 75845767 75845871 -9592609 - MER81 DNA DNA 0 114 1 247 333 225 0 chr17 75845874 75846012 -9592468 - MIR SINE MIR -48 214 46 182 171 11 159 chr17 75846631 75846719 -9591761 + L2 LINE L2 442 516 -2798 527 53 0 26 chr17 75847812 75847888 -9590592 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1766 134 17 33 chr17 75847893 75848192 -9590288 - AluJo SINE Alu -18 294 1 363 285 197 0 chr17 75848384 75848521 -9589959 - MER5A DNA MER1_type -14 175 12 933 206 0 24 chr17 75848545 75848754 -9589726 + MER3 DNA MER1_type 6 209 0 270 143 0 0 chr17 75849697 75849746 -9588734 + (TG)n Simple_repeat Simple_repeat 1 49 0 196 211 140 0 chr17 75850052 75850109 -9588371 + L3 LINE CR1 284 348 -1229 2438 100 0 0 chr17 75850166 75850475 -9588005 + AluSx SINE Alu 1 309 -3 252 259 198 0 chr17 75851338 75851419 -9587061 - MIR SINE MIR -162 100 4 204 346 112 19 chr17 75851567 75851674 -9586806 + MIR SINE MIR 29 145 -117 2186 137 56 6 chr17 75852438 75852795 -9585685 - THE1C LTR MaLR 0 375 1 2377 111 0 0 chr17 75852995 75853302 -9585178 - AluSc SINE Alu -2 307 1 522 314 59 18 chr17 75853378 75853598 -9584882 + MIR SINE MIR 21 249 -13 221 347 53 0 chr17 75854606 75854681 -9583799 + L2 LINE L2 3107 3185 -87 289 320 48 32 chr17 75855436 75855561 -9582919 + MIR3 SINE MIR 15 141 -67 3919 46 2 0 chr17 75855561 75856035 -9582445 - L1PA8 LINE L1 -1 6171 5697 2195 86 34 3 chr17 75856272 75856564 -9581916 + AluSx SINE Alu 6 306 -6 2179 101 0 0 chr17 75857231 75857585 -9580895 + AluSx SINE Alu 35 388 0 1979 122 7 7 chr17 75857972 75858258 -9580222 - AluSx SINE Alu -9 303 18 222 37 0 0 chr17 75858291 75858318 -9580162 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 300 307 108 17 chr17 75858393 75858569 -9579911 + MIR SINE MIR 33 224 -38 212 402 49 0 chr17 75859449 75859531 -9578949 + MIR SINE MIR 20 105 -103 1345 288 106 21 chr17 75859667 75860233 -9578247 + L3 LINE CR1 492 1105 -472 365 273 61 23 chr17 75860301 75860433 -9578047 + MLT1J2 LTR MaLR 3 139 -311 361 212 137 68 chr17 75860493 75860639 -9577841 + MLT1J2 LTR MaLR 278 433 -17 2398 78 3 3 chr17 75860731 75861027 -9577453 - AluY SINE Alu -15 296 1 705 243 30 0 chr17 75861195 75861360 -9577120 + MIR SINE MIR 55 223 -39 363 314 27 9 chr17 75861900 75862012 -9576468 + MIR SINE MIR 42 154 -63 1218 188 5 27 chr17 75863293 75863517 -9574963 - MER20 DNA MER1_type 0 219 1 373 304 135 13 chr17 75864319 75864652 -9573828 - LTR16A LTR ERVL -8 442 34 306 313 21 0 chr17 75864709 75864805 -9573675 + L2 LINE L2 3192 3289 -24 2534 78 7 0 chr17 75864903 75865210 -9573270 + AluSc SINE Alu 1 309 0 275 335 165 10 chr17 75867137 75867343 -9571137 + MIR SINE MIR 25 262 0 2472 255 43 50 chr17 75867858 75868590 -9569890 + L1MC4 LINE L1 6942 7666 -376 3248 61 0 10 chr17 75868590 75868999 -9569481 - L1PA8 LINE L1 -9 6163 5759 2472 255 43 50 chr17 75868999 75869373 -9569107 + L1MC4 LINE L1 7666 8041 -1 1963 153 3 0 chr17 75870293 75870588 -9567892 + AluSx SINE Alu 13 308 -4 2981 55 3 0 chr17 75872147 75872513 -9565967 - L1PA8 LINE L1 0 6172 5806 1338 171 52 77 chr17 75872559 75872922 -9565558 + MLT1A1 LTR MaLR 1 354 -11 2687 115 23 156 chr17 75873083 75873693 -9564787 + MER1A DNA MER1_type 1 529 0 1076 229 28 55 chr17 75874852 75874975 -9563505 - MER113 DNA MER1_type? 0 521 396 2023 97 0 4 chr17 75874975 75875232 -9563248 - AluSx SINE Alu -8 304 49 1076 229 28 55 chr17 75875232 75875471 -9563009 - MER113 DNA MER1_type? -125 396 169 183 80 0 0 chr17 75875496 75875521 -9562959 + (T)n Simple_repeat Simple_repeat 1 25 0 1540 117 0 0 chr17 75875525 75875730 -9562750 - AluSq SINE Alu -108 205 1 764 169 9 143 chr17 75875752 75876013 -9562467 - MER20 DNA MER1_type -2 217 1 238 319 55 54 chr17 75876479 75876662 -9561818 - MIR3 SINE MIR -27 181 4 2251 96 0 10 chr17 75876967 75877258 -9561222 - AluSg SINE Alu -22 288 1 198 156 0 44 chr17 75877593 75877638 -9560842 - MIR SINE MIR -106 156 114 261 323 39 65 chr17 75878421 75878576 -9559904 - L2 LINE L2 0 3313 3163 942 274 23 0 chr17 75879093 75879312 -9559168 - MER58A DNA MER1_type 0 224 1 483 244 215 71 chr17 75879312 75879394 -9559086 + L2 LINE L2 2957 3026 -287 2048 156 3 3 chr17 75879394 75879696 -9558784 - AluJb SINE Alu -10 302 1 483 244 215 71 chr17 75879696 75879707 -9558773 + L2 LINE L2 3026 3034 -279 2427 86 3 0 chr17 75879707 75880008 -9558472 - AluSp SINE Alu -7 306 5 483 244 215 71 chr17 75880008 75880224 -9558256 + L2 LINE L2 3034 3312 -1 286 224 41 0 chr17 75880384 75880482 -9557998 + CT-rich Low_complexity Low_complexity 5 106 0 214 277 0 0 chr17 75880629 75880676 -9557804 + A-rich Low_complexity Low_complexity 5 51 0 3619 124 31 6 chr17 75881217 75881665 -9556815 + MER1A DNA MER1_type 1 465 -2235 198 0 0 0 chr17 75881665 75881687 -9556793 + (CACCC)n Simple_repeat Simple_repeat 3 24 0 3619 124 31 6 chr17 75881687 75881752 -9556728 + MER1A DNA MER1_type 465 527 0 2094 161 0 0 chr17 75882617 75882928 -9555552 - AluJb SINE Alu -1 311 1 258 207 0 0 chr17 75883782 75883840 -9554640 + (CA)n Simple_repeat Simple_repeat 1 58 0 1715 202 40 0 chr17 75885001 75885328 -9553152 - MER58B DNA MER1_type -1 340 1 298 310 94 20 chr17 75885398 75885601 -9552879 - MIR SINE MIR -1 261 44 570 98 0 0 chr17 75886491 75886573 -9551907 + (GA)n Simple_repeat Simple_repeat 1 82 0 394 257 0 10 chr17 75889152 75889253 -9549227 - MIR3 SINE MIR -45 163 64 2042 122 47 3 chr17 75889920 75890216 -9548264 - AluSg SINE Alu -1 309 1 3019 93 2 0 chr17 75891290 75891700 -9546780 + L1P5 LINE L1 5381 5791 -360 307 333 20 0 chr17 75891710 75891812 -9546668 - L1MC4 LINE L1 -1339 6703 6600 * 424 258 31 34 chr17 75891730 75891978 -9546502 + L1MC4 LINE L1 6595 6703 -1339 312 294 0 29 chr17 75891903 75892005 -9546475 - L1MC4 LINE L1 -1333 6709 6611 * 249 269 0 32 chr17 75892006 75892099 -9546381 + L1MC4 LINE L1 6614 6703 -1339 209 244 0 0 chr17 75892099 75892140 -9546340 + (TA)n Simple_repeat Simple_repeat 2 42 0 373 279 23 0 chr17 75892142 75892228 -9546252 - L1MC4 LINE L1 -1342 6700 6613 331 244 37 12 chr17 75892175 75892257 -9546223 + L1MCa LINE L1 1995 2078 -4348 * 2567 93 8 5 chr17 75892270 75892637 -9545843 + L1PB1 LINE L1 5782 6149 -2 388 321 52 0 chr17 75892679 75892813 -9545667 - MIR SINE MIR -55 207 67 279 0 0 0 chr17 75893626 75893657 -9544823 + (TC)n Simple_repeat Simple_repeat 2 32 0 1078 182 37 14 chr17 75894214 75894428 -9544052 - MER20 DNA MER1_type 0 219 1 855 258 44 35 chr17 75895377 75895695 -9542785 + MER33 DNA MER1_type 3 323 -1 1987 106 3 0 chr17 75896347 75896630 -9541850 + AluSx SINE Alu 29 312 0 1739 171 7 3 chr17 75896654 75896963 -9541517 + AluSx SINE Alu 1 310 -2 893 185 105 25 chr17 75897073 75897273 -9541207 + MER20 DNA MER1_type 2 217 -2 1009 236 108 28 chr17 75898335 75898687 -9539793 + MLT1C LTR MaLR 8 387 -80 431 257 40 33 chr17 75898692 75898834 -9539646 + L2 LINE L2 3161 3306 -7 2044 116 0 0 chr17 75898834 75899126 -9539354 + AluSx SINE Alu 1 292 -20 493 125 0 0 chr17 75900855 75900927 -9537553 - MSTA LTR MaLR 0 428 357 1994 158 3 0 chr17 75900927 75901284 -9537196 + AluSx SINE Alu 1 358 0 2231 130 35 27 chr17 75901285 75901653 -9536827 - MSTA LTR MaLR -57 371 1 1050 243 14 0 chr17 75902074 75902292 -9536188 - MER58A DNA MER1_type -3 221 1 366 291 156 11 chr17 75902446 75902625 -9535855 + MIR SINE MIR 12 216 -46 2204 80 0 0 chr17 75902766 75903240 -9535240 + AluY SINE Alu 1 474 0 535 298 29 55 chr17 75903245 75903440 -9535040 + L1ME4a LINE L1 5630 5818 -303 5680 200 55 19 chr17 75903440 75903549 -9534931 + Charlie1a DNA MER1_type 1 105 -2656 1613 86 8 45 chr17 75903549 75903794 -9534686 + AluSp SINE Alu 65 300 -13 5680 200 55 19 chr17 75903794 75905084 -9533396 + Charlie1a DNA MER1_type 105 1451 -4 535 298 29 55 chr17 75905084 75905163 -9533317 + L1ME4a LINE L1 5818 5897 -224 214 211 0 0 chr17 75905315 75905353 -9533127 + L2 LINE L2 3261 3298 -15 225 250 24 12 chr17 75905473 75905557 -9532923 + (TA)n Simple_repeat Simple_repeat 1 85 0 226 322 69 46 chr17 75906802 75906889 -9531591 - L3b LINE CR1 -5 1578 1490 22 0 0 0 chr17 75907260 75907282 -9531198 + AT_rich Low_complexity Low_complexity 1 22 0 200 213 66 16 chr17 75908513 75908574 -9529906 - MIR SINE MIR -110 152 89 230 271 34 0 chr17 75908794 75908853 -9529627 + L3 LINE CR1 1495 1555 -22 332 304 74 74 chr17 75909207 75909424 -9529056 + LTR67 LTR ERVL 46 262 -295 331 211 0 0 chr17 75909429 75909486 -9528994 - L1ME LINE L1 -422 5748 5692 779 262 33 55 chr17 75909578 75909761 -9528719 + LTR67 LTR ERVL 293 470 -87 868 121 0 30 chr17 75909761 75909893 -9528587 - FLAM_C SINE Alu -5 128 1 779 262 33 55 chr17 75909893 75909980 -9528500 + LTR67 LTR ERVL 470 557 0 1967 223 36 64 chr17 75910072 75910164 -9528316 - L1ME3A LINE L1 -1 6169 6076 2342 85 0 3 chr17 75910164 75910469 -9528011 + AluY SINE Alu 1 304 -7 1967 223 36 64 chr17 75910469 75910986 -9527494 - L1ME3A LINE L1 -94 6076 5577 1631 173 7 3 chr17 75910997 75911281 -9527199 - AluJb SINE Alu -19 293 9 652 291 27 67 chr17 75911750 75912049 -9526431 - Charlie8 DNA MER1_type -2128 289 3 219 167 24 0 chr17 75912708 75912750 -9525730 + (CA)n Simple_repeat Simple_repeat 1 43 0 188 380 0 25 chr17 75912833 75912912 -9525568 + L2 LINE L2 3189 3265 -7 187 253 12 84 chr17 75913540 75913623 -9524857 - MIR SINE MIR -184 78 2 2187 93 3 3 chr17 75913781 75914083 -9524397 - AluSc SINE Alu -7 302 1 2076 112 7 0 chr17 75914275 75914569 -9523911 + AluSx SINE Alu 1 296 -16 209 360 97 17 chr17 75914611 75914786 -9523694 - L2 LINE L2 -219 3053 2865 940 224 102 73 chr17 75915391 75915540 -9522940 + MLT1H LTR MaLR 20 163 -386 2337 145 3 27 chr17 75915540 75915913 -9522567 - THE1B LTR MaLR 0 364 1 940 224 102 73 chr17 75915913 75915947 -9522533 + MLT1H LTR MaLR 163 195 -354 2428 63 0 0 chr17 75915947 75916248 -9522232 + AluY SINE Alu 1 301 -10 940 224 102 73 chr17 75916248 75916539 -9521941 + MLT1H LTR MaLR 195 549 0 222 196 0 22 chr17 75916722 75916768 -9521712 + L2 LINE L2 3266 3310 -3 * 458 286 68 44 chr17 75916759 75917011 -9521469 - L3b LINE CR1 -98 1485 1228 188 263 263 26 chr17 75917103 75917217 -9521263 + MER5A DNA MER1_type 47 187 -2 * 521 200 11 0 chr17 75917128 75917223 -9521257 - MER5A DNA MER1_type -83 106 11 236 209 0 0 chr17 75917231 75917274 -9521206 - MIR SINE MIR -62 146 104 399 312 39 26 chr17 75917419 75917573 -9520907 - MER5B DNA MER1_type -15 163 8 767 276 24 47 chr17 75917637 75917698 -9520782 - MIR SINE MIR -7 255 194 2213 102 3 3 chr17 75917698 75918003 -9520477 - AluSx SINE Alu -7 305 1 767 276 24 47 chr17 75918003 75918195 -9520285 - MIR SINE MIR -68 194 8 2341 67 0 3 chr17 75918288 75918586 -9519894 + AluY SINE Alu 4 300 -11 2385 134 32 11 chr17 75918640 75919089 -9519391 + L1MA5A LINE L1 5848 6630 -27 2100 115 3 37 chr17 75919089 75919412 -9519068 + AluSx SINE Alu 1 312 0 2385 134 32 11 chr17 75919412 75919441 -9519039 + L1MA5A LINE L1 6630 6657 0 270 304 29 29 chr17 75919443 75919581 -9518899 + MER103 DNA DNA 16 153 -13 448 175 262 8 chr17 75919670 75919796 -9518684 - MER5A DNA MER1_type 0 189 32 180 0 0 0 chr17 75920473 75920493 -9517987 + (T)n Simple_repeat Simple_repeat 1 20 0 201 39 0 0 chr17 75921718 75921744 -9516736 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 464 316 41 0 chr17 75921964 75922135 -9516345 - MIR SINE MIR -18 244 67 294 256 105 0 chr17 75922358 75922444 -9516036 - L2 LINE L2 -14 3299 3205 347 173 0 0 chr17 75922690 75922755 -9515725 + AluJ/FLAM SINE Alu 2 57 -245 243 0 0 0 chr17 75922779 75922806 -9515674 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 870 149 29 80 chr17 75922809 75922984 -9515496 + FRAM SINE Alu 1 166 0 2440 190 33 55 chr17 75923118 75923664 -9514816 + L1ME2 LINE L1 5433 5965 -199 2298 99 76 12 chr17 75923664 75924006 -9514474 - THE1B LTR MaLR 0 364 1 2440 190 33 55 chr17 75924006 75924095 -9514385 + L1ME2 LINE L1 5965 6054 -110 363 240 35 122 chr17 75924194 75924332 -9514148 + L1MC4 LINE L1 7833 7981 -61 1826 99 30 46 chr17 75924332 75924634 -9513846 + AluSp SINE Alu 1 297 -16 2302 74 17 0 chr17 75924634 75924931 -9513549 + AluY SINE Alu 1 302 -9 363 240 35 122 chr17 75924931 75925020 -9513460 + L1MC4 LINE L1 7979 8041 -1 396 0 0 0 chr17 75926218 75926262 -9512218 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 396 274 123 25 chr17 75926623 75926805 -9511675 - MIR SINE MIR -65 197 2 229 183 113 42 chr17 75926973 75927044 -9511436 - L1ME4a LINE L1 -76 6045 5970 1242 132 47 0 chr17 75927075 75927288 -9511192 - L1MD3 LINE L1 -15 7980 7758 2342 70 3 46 chr17 75927408 75927735 -9510745 - AluSp SINE Alu 0 313 1 256 276 79 24 chr17 75927867 75927994 -9510486 - L1ME LINE L1 -464 5657 5524 324 120 0 0 chr17 75928743 75928793 -9509687 + (A)n Simple_repeat Simple_repeat 1 50 0 1209 163 31 80 chr17 75929346 75929635 -9508845 + L1MA9 LINE L1 6032 6306 -6 1991 124 0 23 chr17 75930654 75930961 -9507519 + AluSx SINE Alu 1 300 -12 1624 144 0 78 chr17 75931725 75931844 -9506636 - AluJb SINE Alu -17 295 168 2431 63 0 3 chr17 75931844 75932146 -9506334 - AluY SINE Alu -10 301 1 1624 144 0 78 chr17 75932146 75932346 -9506134 - AluJb SINE Alu -144 168 1 2710 102 3 3 chr17 75932438 75932802 -9505678 + THE1B LTR MaLR 1 364 0 331 158 35 0 chr17 75932959 75933016 -9505464 + MIR SINE MIR 86 144 -118 1784 160 0 25 chr17 75934529 75934847 -9503633 + AluJb SINE Alu 1 310 -2 314 112 18 14 chr17 75934853 75934924 -9503556 + L1ME1 LINE L1 6108 6184 0 204 125 0 0 chr17 75935650 75935682 -9502798 + (A)n Simple_repeat Simple_repeat 1 32 0 248 380 185 0 chr17 75935922 75936127 -9502353 - MIR SINE MIR -2 260 18 1174 170 0 28 chr17 75936508 75936720 -9501760 + L1MB5 LINE L1 5844 6049 -125 354 206 11 11 chr17 75936720 75936808 -9501672 + L1MA10 LINE L1 6239 6330 -4 610 159 8 45 chr17 75936817 75936949 -9501531 + L1MB3 LINE L1 6050 6176 -7 408 248 0 29 chr17 75938013 75938118 -9500362 + MIR SINE MIR 44 145 -117 1681 176 8 56 chr17 75938209 75938363 -9500117 + MER47A DNA MER2_type 27 187 -2136 1866 121 6 54 chr17 75938363 75938677 -9499803 + AluSq SINE Alu 1 299 -14 1681 176 8 56 chr17 75938677 75938879 -9499601 + MER47A DNA MER2_type 187 366 0 277 299 64 38 chr17 75939669 75939826 -9498654 - MIR3 SINE MIR -27 181 21 852 114 0 107 chr17 75940003 75940035 -9498445 - FLAM_C SINE Alu -169 133 99 2197 110 3 0 chr17 75940035 75940343 -9498137 + AluSq SINE Alu 4 312 -1 852 114 0 107 chr17 75940343 75940459 -9498021 - FLAM_C SINE Alu -203 99 1 198 103 0 0 chr17 75940771 75940800 -9497680 + (T)n Simple_repeat Simple_repeat 1 29 0 1631 139 102 4 chr17 75941089 75941362 -9497118 + AluJb SINE Alu 1 300 -12 2221 97 0 7 chr17 75941362 75941650 -9496830 + AluSq SINE Alu 1 286 -27 181 388 47 23 chr17 75941747 75941876 -9496604 - MIR3 SINE MIR -62 146 15 2054 148 2 69 chr17 75942343 75942399 -9496081 + L1MB3 LINE L1 5776 5834 -349 2538 70 0 10 chr17 75942399 75942711 -9495769 + AluY SINE Alu 1 309 -2 2054 148 2 69 chr17 75942711 75943036 -9495444 + L1MB3 LINE L1 5834 6179 -4 816 156 0 15 chr17 75943036 75943171 -9495309 + AluJo/FLAM SINE Alu 1 133 -169 2349 89 13 3 chr17 75943173 75943475 -9495005 + AluSc SINE Alu 1 305 -4 2054 148 2 69 chr17 75943475 75943523 -9494957 + L1MB3 LINE L1 6130 6180 -3 2305 123 7 0 chr17 75944346 75944656 -9493824 - AluSx SINE Alu 0 312 1 564 254 43 30 chr17 75944794 75944986 -9493494 + L1ME3 LINE L1 5968 6160 -2 195 42 0 0 chr17 75944989 75945013 -9493467 + (CATA)n Simple_repeat Simple_repeat 1 24 0 367 316 57 82 chr17 75945283 75945527 -9492953 - L3 LINE CR1 -196 1381 1144 936 140 7 7 chr17 75945540 75945690 -9492790 - MLT1A1 LTR MaLR -215 150 1 2473 87 3 3 chr17 75945725 75946036 -9492444 + AluSp SINE Alu 1 311 -2 663 243 39 17 chr17 75947077 75947258 -9491222 - MIR SINE MIR 0 262 78 234 62 0 0 chr17 75948108 75948140 -9490340 + (CA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr17 75948139 75948162 -9490318 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 2330 104 0 0 chr17 75949347 75949646 -9488834 + AluSg SINE Alu 3 301 -9 385 249 71 30 chr17 75950234 75950403 -9488077 - MIR SINE MIR -1 261 86 2185 112 3 29 chr17 75950577 75950891 -9487589 - AluSx SINE Alu -6 306 1 1842 54 9 14 chr17 75951183 75951404 -9487076 + AluSg/x SINE Alu 78 297 -15 2204 104 0 0 chr17 75951912 75952215 -9486265 + AluSc SINE Alu 1 303 0 477 243 59 44 chr17 75952700 75952836 -9485644 + MLT1I LTR MaLR 295 409 0 770 255 54 76 chr17 75952997 75953366 -9485114 + L2 LINE L2 2911 3271 -1 442 259 135 35 chr17 75954310 75954531 -9483949 + MIR SINE MIR 12 250 -12 270 0 0 0 chr17 75955154 75955184 -9483296 + (TG)n Simple_repeat Simple_repeat 1 30 0 2249 119 7 0 chr17 75955920 75956230 -9482250 - AluSx SINE Alu 0 312 1 524 327 108 5 chr17 75956528 75956751 -9481729 + MIR SINE MIR 2 247 -15 618 195 49 30 chr17 75956846 75957010 -9481470 - MIR SINE MIR -65 197 31 246 32 0 0 chr17 75957487 75957518 -9480962 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 35 0 0 chr17 75958794 75958823 -9479657 + GC_rich Low_complexity Low_complexity 1 29 0 2428 142 16 43 chr17 75959393 75959567 -9478913 + MSTB LTR MaLR 1 178 -248 2166 139 0 10 chr17 75959567 75959877 -9478603 + AluSx SINE Alu 6 312 0 2428 142 16 43 chr17 75959877 75960140 -9478340 + MSTB LTR MaLR 178 426 0 417 309 75 11 chr17 75960263 75960360 -9478120 - MIR SINE MIR -17 245 156 225 0 0 0 chr17 75960360 75960385 -9478095 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 417 309 75 11 chr17 75960385 75960511 -9477969 - MIR SINE MIR -106 156 7 250 308 86 42 chr17 75960485 75960528 -9477952 + L2 LINE L2 1715 1755 -1559 * 342 247 152 57 chr17 75960528 75960686 -9477794 - MER69A DNA AcHobo -4 173 1 250 308 86 42 chr17 75960686 75961002 -9477478 + L2 LINE L2 1755 2090 -1224 322 346 78 15 chr17 75961052 75961257 -9477223 + MIR SINE MIR 20 237 -25 278 320 76 41 chr17 75961583 75962051 -9476429 + L2 LINE L2 2575 3059 -213 6992 34 0 0 chr17 75962225 75963106 -9475374 - L1PA3 LINE L1 -983 5163 4283 7584 19 0 0 chr17 75963106 75964127 -9474353 + L1PA3 LINE L1 5135 6155 0 466 273 76 23 chr17 75964139 75964311 -9474169 + MIR SINE MIR 20 200 -62 1188 224 9 25 chr17 75964326 75964652 -9473828 - MER33 DNA MER1_type 0 324 4 412 233 11 0 chr17 75964658 75964748 -9473732 + MER68 LTR ERV1 357 447 -115 2386 86 0 29 chr17 75964748 75965062 -9473418 - AluSc SINE Alu -4 305 1 2248 123 13 0 chr17 75965062 75965363 -9473117 - AluSx SINE Alu -7 305 1 330 191 88 0 chr17 75965363 75965431 -9473049 + MLT1A1 LTR MaLR 290 363 -2 699 212 68 25 chr17 75965552 75965788 -9472692 + ORSL DNA AcHobo 1 246 -29 2143 131 36 20 chr17 75966128 75966486 -9471994 - THE1B LTR MaLR 0 364 1 185 253 345 0 chr17 75966732 75966819 -9471661 - MIR SINE MIR -71 191 75 886 207 0 0 chr17 75966883 75967047 -9471433 + FRAM SINE Alu 1 164 -2 734 242 43 16 chr17 75967217 75967403 -9471077 + MIR SINE MIR 15 205 -57 1519 217 53 67 chr17 75967405 75967973 -9470507 + MLT1F1 LTR MaLR 8 567 0 230 283 50 0 chr17 75967981 75968041 -9470439 + L2 LINE L2 3251 3313 0 2278 124 0 0 chr17 75969020 75969318 -9469162 - AluSx SINE Alu -14 298 1 1126 35 14 7 chr17 75969546 75969718 -9468762 - AluY SINE Alu 0 314 142 468 170 138 0 chr17 75969943 75970037 -9468443 + FLAM_C SINE Alu 1 107 -36 7190 42 0 1 chr17 75970064 75970965 -9467515 - L1PA5 LINE L1 -1 6153 5254 206 357 12 0 chr17 75971648 75971732 -9466748 + (CA)n Simple_repeat Simple_repeat 1 85 0 * 368 348 11 11 chr17 75971671 75971849 -9466631 + (CACG)n Simple_repeat Simple_repeat 1 178 0 * 480 288 17 6 chr17 75971745 75971922 -9466558 + (CA)n Simple_repeat Simple_repeat 1 179 0 381 252 7 27 chr17 75971896 75972043 -9466437 + (CCCA)n Simple_repeat Simple_repeat 3 146 0 * 505 285 12 6 chr17 75972047 75972212 -9466268 + (CA)n Simple_repeat Simple_repeat 1 166 0 429 222 12 6 chr17 75972320 75972487 -9465993 + (CA)n Simple_repeat Simple_repeat 1 168 0 484 297 23 0 chr17 75972539 75972714 -9465766 + (CA)n Simple_repeat Simple_repeat 1 179 0 475 156 9 46 chr17 75973880 75973989 -9464491 + L1MC3 LINE L1 6990 7094 -691 330 198 23 47 chr17 75973989 75974075 -9464405 + MLT1F1 LTR MaLR 32 115 -452 1977 172 68 98 chr17 75974075 75974607 -9463873 + L1MD3 LINE L1 7396 7910 -85 2481 63 3 3 chr17 75974607 75974906 -9463574 - AluSg SINE Alu -11 299 1 1977 172 68 98 chr17 75974906 75974972 -9463508 + L1MD3 LINE L1 7910 7976 -19 604 158 27 0 chr17 75975729 75975997 -9462483 + (CA)n Simple_repeat Simple_repeat 1 275 0 491 215 6 0 chr17 75976021 75976198 -9462282 + (CA)n Simple_repeat Simple_repeat 1 178 0 415 180 56 22 chr17 75976345 75976434 -9462046 + MIR SINE MIR 43 134 -128 656 228 18 6 chr17 75977364 75977531 -9460949 + MER5A DNA MER1_type 19 187 -2 2351 88 3 10 chr17 75977623 75977929 -9460551 - AluSq SINE Alu -9 304 1 1287 175 141 0 chr17 75978252 75978515 -9459965 - AluJo SINE Alu -2 300 1 229 257 19 86 chr17 75979136 75979241 -9459239 - MIR3 SINE MIR -50 158 61 225 234 31 31 chr17 75979566 75979630 -9458850 + (TATG)n Simple_repeat Simple_repeat 3 66 0 556 156 28 95 chr17 75980510 75980689 -9457791 - ORSL DNA AcHobo -3 272 106 1292 224 45 13 chr17 75981087 75981460 -9457020 - L1MB5 LINE L1 -1 6179 5800 2343 82 3 10 chr17 75981644 75981950 -9456530 - AluSg SINE Alu -2 308 5 1028 153 0 0 chr17 75981960 75982104 -9456376 - AluSx SINE Alu -18 294 151 1019 72 0 8 chr17 75982228 75982353 -9456127 - AluSx SINE Alu -166 146 23 258 30 0 0 chr17 75983088 75983116 -9455364 + (A)n Simple_repeat Simple_repeat 1 29 0 2628 53 0 28 chr17 75983116 75983436 -9455044 + AluY SINE Alu 1 311 0 2468 87 0 3 chr17 75983854 75984163 -9454317 + AluSx SINE Alu 1 308 -4 217 250 0 0 chr17 75985092 75985144 -9453336 + A-rich Low_complexity Low_complexity 3 54 0 648 133 26 9 chr17 75986560 75986673 -9451807 + L1ME1 LINE L1 5853 5967 -199 812 54 0 0 chr17 75986673 75986766 -9451714 + AluS SINE Alu 1 93 -219 372 143 0 0 chr17 75986770 75986826 -9451654 - AluSq/x SINE Alu -177 126 71 181 161 0 0 chr17 75986830 75986861 -9451619 + L2 LINE L2 3219 3249 -23 2443 102 0 3 chr17 75987053 75987366 -9451114 + AluSq SINE Alu 1 312 -1 675 217 83 17 chr17 75988176 75988356 -9450124 + MIR SINE MIR 2 193 -69 2314 95 0 23 chr17 75988363 75988669 -9449811 + AluSq SINE Alu 1 299 -14 2455 96 0 6 chr17 75989218 75989531 -9448949 + AluSq SINE Alu 1 311 -2 182 36 0 36 chr17 75989577 75989605 -9448875 + (CA)n Simple_repeat Simple_repeat 1 27 0 896 62 77 8 chr17 75990862 75990992 -9447488 - MER85 DNA T2_type 0 139 1 232 309 75 11 chr17 75991690 75991784 -9446696 - MIR3 SINE MIR -22 186 87 1891 152 28 0 chr17 75991786 75992069 -9446411 + AluJb SINE Alu 1 291 -21 266 313 110 25 chr17 75993884 75994047 -9444433 + MIR SINE MIR 24 200 -62 255 229 62 52 chr17 75995686 75995782 -9442698 - MIR SINE MIR -71 137 41 2460 128 29 73 chr17 75995993 75996447 -9442033 + Tigger2a DNA MER2_type 1 434 0 1741 172 0 7 chr17 75998292 75998571 -9439909 + AluJo SINE Alu 14 290 -22 349 299 17 17 chr17 75998685 75998802 -9439678 + MIR SINE MIR 54 170 -92 239 327 62 9 chr17 75999664 75999777 -9438703 - L2 LINE L2 -5 3267 3149 234 232 81 30 chr17 76000178 76000277 -9438203 + MLT1K LTR MaLR 483 586 -2 215 326 215 0 chr17 76000367 76000502 -9437978 + MIR SINE MIR 33 196 -66 2767 91 6 6 chr17 76000594 76000958 -9437522 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr17 76001648 76001669 -9436811 + AT_rich Low_complexity Low_complexity 1 21 0 1091 172 0 0 chr17 76001669 76001843 -9436637 - FRAM SINE Alu -2 174 1 2486 31 25 0 chr17 76002265 76002551 -9435929 - AluY SINE Alu -18 293 1 3790 155 23 41 chr17 76003117 76003273 -9435207 + L1MB3 LINE L1 5446 5603 -580 2067 109 0 67 chr17 76003273 76003418 -9435062 + AluSq SINE Alu 1 154 -159 2556 50 0 0 chr17 76003418 76003744 -9434736 + AluY SINE Alu 1 311 0 2067 109 0 67 chr17 76003744 76003928 -9434552 + AluSq SINE Alu 154 308 -5 3790 155 23 41 chr17 76003928 76004520 -9433960 + L1MB3 LINE L1 5603 6180 -3 2059 161 0 0 chr17 76004525 76004835 -9433645 + AluJo SINE Alu 1 310 -2 211 143 0 24 chr17 76004863 76004905 -9433575 + (TAAAA)n Simple_repeat Simple_repeat 1 41 0 309 296 123 12 chr17 76006402 76006564 -9431916 - MER5A DNA MER1_type -6 183 4 1038 227 8 12 chr17 76007853 76008104 -9430376 + L1MD3 LINE L1 7746 7995 0 2518 43 7 3 chr17 76008173 76008474 -9430006 + AluY SINE Alu 1 302 -9 495 263 124 19 chr17 76008737 76008996 -9429484 + L1ME4a LINE L1 5634 5919 -202 298 204 0 0 chr17 76009678 76009732 -9428748 - L2 LINE L2 -2 3270 3217 215 200 0 0 chr17 76011180 76011220 -9427260 + (CGGGG)n Simple_repeat Simple_repeat 1 40 0 1477 182 0 111 chr17 76011497 76011937 -9426543 - MLT1C LTR MaLR -76 391 1 1979 95 95 11 chr17 76012148 76012421 -9426059 + AluSg SINE Alu 1 296 -14 2561 161 21 95 chr17 76013135 76013800 -9424680 + L1MC3 LINE L1 6549 7164 -621 1962 146 48 16 chr17 76013798 76014095 -9424385 + L1MC3 LINE L1 7395 7708 -77 * 2440 96 30 28 chr17 76014095 76014458 -9424022 - THE1B LTR MaLR 0 364 1 1962 146 48 16 chr17 76014458 76014537 -9423943 + L1MC3 LINE L1 7708 7783 -2 233 269 64 0 chr17 76014631 76014709 -9423771 - L1 LINE L1 -1306 4840 4758 2159 122 0 0 chr17 76014716 76015003 -9423477 - AluSx SINE Alu -15 297 11 235 315 50 66 chr17 76015248 76015489 -9422991 + L2 LINE L2 2825 3061 -211 510 314 49 10 chr17 76015736 76015937 -9422543 - MIR SINE MIR -20 242 33 266 309 37 0 chr17 76016067 76016148 -9422332 + MIR SINE MIR 171 254 -8 351 208 0 0 chr17 76016251 76016323 -9422157 - MER3 DNA MER1_type -137 72 1 1286 195 66 36 chr17 76016452 76016785 -9421695 - MER2 DNA MER2_type -1 343 1 584 253 102 0 chr17 76017483 76017649 -9420831 - MIR SINE MIR 0 262 80 2369 112 0 0 chr17 76017792 76018104 -9420376 + AluSx SINE Alu 1 312 0 1861 162 0 34 chr17 76018785 76019106 -9419374 - AluJo SINE Alu -2 310 1 488 276 122 11 chr17 76020257 76020438 -9418042 - L2 LINE L2 0 3313 3113 2157 139 0 7 chr17 76020585 76020895 -9417585 + AluJb SINE Alu 1 308 -4 324 310 40 0 chr17 76021821 76021921 -9416559 - MIR SINE MIR -116 146 43 183 80 0 0 chr17 76022187 76022212 -9416268 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 485 228 60 27 chr17 76022289 76022438 -9416042 - MIR3 SINE MIR -23 185 32 2443 93 0 0 chr17 76023572 76023874 -9414606 + AluSx SINE Alu 1 302 -10 251 305 35 43 chr17 76023951 76024092 -9414388 + L2 LINE L2 2952 3091 -222 405 244 114 15 chr17 76025383 76025514 -9412966 + L2 LINE L2 3159 3302 -11 380 257 151 0 chr17 76025527 76025663 -9412817 - MIR SINE MIR -7 255 101 3250 192 27 31 chr17 76025832 76026635 -9411845 + L1MB7 LINE L1 3411 4210 -1936 3545 159 77 1 chr17 76026635 76027294 -9411186 + L1MB7 LINE L1 5476 6184 0 2233 113 0 0 chr17 76027298 76027589 -9410891 + AluSx SINE Alu 1 291 -21 1698 166 35 10 chr17 76028362 76028651 -9409829 - AluJo SINE Alu -16 296 1 228 111 0 0 chr17 76028661 76028697 -9409783 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 2188 99 0 4 chr17 76028703 76028976 -9409504 - AluSc SINE Alu -37 272 1 264 248 45 102 chr17 76028977 76029134 -9409346 + L2 LINE L2 3022 3169 -144 328 239 9 64 chr17 76029668 76029777 -9408703 + MLT1K LTR MaLR 181 283 -305 2054 104 54 0 chr17 76030103 76030382 -9408098 + AluSq SINE Alu 1 294 -19 2318 69 0 21 chr17 76030385 76030706 -9407774 + AluY SINE Alu 1 311 0 2190 128 3 0 chr17 76031264 76031570 -9406910 - AluSx SINE Alu -5 307 1 661 279 37 16 chr17 76031595 76032030 -9406450 - LTR33 LTR ERVL 0 521 1 261 315 86 67 chr17 76032654 76032921 -9405559 + L2 LINE L2 3042 3313 0 835 207 13 73 chr17 76034210 76034397 -9404083 + MER20 DNA MER1_type 2 174 -45 2046 128 3 29 chr17 76034397 76034710 -9403770 + AluSx SINE Alu 1 305 -7 835 207 13 73 chr17 76034710 76034754 -9403726 + MER20 DNA MER1_type 174 219 0 311 236 6 35 chr17 76035530 76035704 -9402776 + (TG)n Simple_repeat Simple_repeat 1 169 0 378 273 62 23 chr17 76035827 76035976 -9402504 + MIR SINE MIR 43 194 -60 523 235 0 23 chr17 76036076 76036208 -9402272 + Charlie5 DNA MER1_type 2495 2623 0 1919 100 4 29 chr17 76036857 76037136 -9401344 + AluSq SINE Alu 29 300 -13 727 247 41 6 chr17 76038297 76038467 -9400013 - MER5B DNA MER1_type -1 177 2 630 204 60 30 chr17 76038534 76038701 -9399779 + MER20 DNA MER1_type 48 219 0 1070 196 22 0 chr17 76038710 76038894 -9399586 - MER5A DNA MER1_type -1 188 1 2127 115 31 0 chr17 76038975 76039263 -9399217 + AluSx SINE Alu 1 297 -15 1225 263 30 53 chr17 76039270 76039745 -9398735 - MLT1J LTR MaLR -43 468 5 475 237 141 0 chr17 76039784 76039940 -9398540 - MIR SINE MIR -16 246 69 2722 137 129 14 chr17 76040801 76041523 -9396957 - MER21A LTR ERV1 0 931 14 441 0 0 0 chr17 76041523 76041572 -9396908 + (TG)n Simple_repeat Simple_repeat 2 50 0 2722 137 129 14 chr17 76041572 76041588 -9396892 - MER21A LTR ERV1 -917 14 1 219 303 61 0 chr17 76041864 76041930 -9396550 + L2 LINE L2 3205 3274 -39 2303 124 21 32 chr17 76042054 76042433 -9396047 + THE1C LTR MaLR 1 375 0 1768 142 3 51 chr17 76043326 76043643 -9394837 + AluJb SINE Alu 2 304 0 628 207 9 0 chr17 76045153 76045264 -9393216 + MER81 DNA DNA 2 113 -1 207 100 0 0 chr17 76045668 76045698 -9392782 + (CA)n Simple_repeat Simple_repeat 1 30 0 239 71 24 0 chr17 76046521 76046563 -9391917 + (TC)n Simple_repeat Simple_repeat 2 44 0 1500 157 49 30 chr17 76046565 76046832 -9391648 - AluJb SINE Alu -40 272 1 285 266 46 55 chr17 76046862 76046971 -9391509 - L3 LINE CR1 -5 1572 1465 261 267 23 70 chr17 76047213 76047299 -9391181 + MIR3 SINE MIR 120 201 -7 375 225 22 124 chr17 76047765 76047943 -9390537 + MIR3 SINE MIR 21 180 -28 2561 53 3 3 chr17 76049189 76049488 -9388992 - AluSg SINE Alu -11 299 1 622 156 26 0 chr17 76050308 76050541 -9387939 + (CA)n Simple_repeat Simple_repeat 1 239 0 25 0 0 0 chr17 76100714 76100739 -9337741 + AT_rich Low_complexity Low_complexity 1 25 0 758 192 75 0 chr17 76101981 76102127 -9336353 - MER3 DNA MER1_type 0 209 53 32 103 0 0 chr17 76102362 76102478 -9336002 + AT_rich Low_complexity Low_complexity 1 116 0 7717 38 2 2 chr17 76103007 76103883 -9334597 + L1PA5 LINE L1 5276 6151 -3 9178 30 5 1 chr17 76104353 76105444 -9333036 + L1P LINE L1 4189 5283 -863 604 307 48 48 chr17 76105549 76105862 -9332618 + HERV16 LTR ERVL 525 837 -4159 23 54 0 0 chr17 76106759 76106796 -9331684 + AT_rich Low_complexity Low_complexity 1 37 0 2440 33 0 0 chr17 76107507 76107778 -9330702 + L1PA3 LINE L1 5883 6153 -2 1149 289 48 35 chr17 76108259 76108796 -9329684 + MLT1-int LTR MaLR 119 662 -709 404 182 11 0 chr17 76109161 76109249 -9329231 + (TATG)n Simple_repeat Simple_repeat 2 90 0 30 45 0 0 chr17 76109267 76109311 -9329169 + AT_rich Low_complexity Low_complexity 1 44 0 1520 259 22 6 chr17 76109594 76109953 -9328527 - MLT1A1 LTR MaLR 0 365 1 235 368 18 18 chr17 76110668 76110782 -9327698 - MIR SINE MIR -137 125 12 190 235 15 15 chr17 76110987 76111055 -9327425 - MER5C DNA MER1_type -37 287 220 192 274 78 0 chr17 76111122 76111173 -9327307 - MER5C DNA MER1_type -269 55 1 1268 275 62 33 chr17 76112210 76112960 -9325520 - L1ME LINE L1 -391 5771 4998 681 260 120 50 chr17 76112957 76113341 -9325139 + L1ME3 LINE L1 5751 6161 -1 * 2419 81 3 0 chr17 76114556 76114864 -9323616 + AluY SINE Alu 1 309 -2 1836 130 39 14 chr17 76115349 76115633 -9322847 + AluJb SINE Alu 1 291 -21 2583 170 31 0 chr17 76115912 76116329 -9322151 + Tigger2a DNA MER2_type 2 431 -3 2200 117 3 3 chr17 76116443 76116751 -9321729 - AluSx SINE Alu -4 308 1 21 0 0 0 chr17 76116874 76116895 -9321585 + AT_rich Low_complexity Low_complexity 1 21 0 469 298 66 28 chr17 76116926 76117107 -9321373 + MIR SINE MIR 53 240 -22 505 318 39 55 chr17 76117135 76117626 -9320854 - HAL1b LINE L1 -660 688 206 2164 132 3 0 chr17 76117766 76118069 -9320411 - AluSx SINE Alu -8 304 1 774 99 0 0 chr17 76118180 76118281 -9320199 + AluY SINE Alu 201 301 -10 3102 107 69 60 chr17 76118507 76118986 -9319494 + L1MA2 LINE L1 5748 6221 -83 1986 125 7 34 chr17 76118986 76119282 -9319198 + AluJb SINE Alu 1 288 -24 216 0 0 0 chr17 76119285 76119309 -9319171 + (TG)n Simple_repeat Simple_repeat 1 24 0 3102 107 69 60 chr17 76119309 76119377 -9319103 + L1MA2 LINE L1 6222 6304 0 23 33 0 0 chr17 76119491 76119521 -9318959 + AT_rich Low_complexity Low_complexity 1 30 0 2259 102 0 3 chr17 76120151 76120455 -9318025 - AluSc SINE Alu -6 303 1 347 240 175 26 chr17 76120728 76120882 -9317598 - MIR SINE MIR -19 243 67 2282 107 0 10 chr17 76120889 76121197 -9317283 + AluSx SINE Alu 1 305 -7 713 258 36 27 chr17 76121427 76121648 -9316832 + MIR SINE MIR 19 241 -21 516 100 71 0 chr17 76123035 76123105 -9315375 - AluSp/q SINE Alu -24 289 215 1652 190 72 3 chr17 76123292 76123624 -9314856 - MLT1A1 LTR MaLR -10 355 1 301 311 91 8 chr17 76123788 76123920 -9314560 + MIR3 SINE MIR 54 196 -12 314 284 142 71 chr17 76124748 76124931 -9313549 + MIR3 SINE MIR 3 198 -10 322 305 0 0 chr17 76125450 76125545 -9312935 - L1MC4 LINE L1 -1339 6703 6609 24 0 0 0 chr17 76125545 76125569 -9312911 + AT_rich Low_complexity Low_complexity 1 24 0 1353 186 81 86 chr17 76125686 76126128 -9312352 - MLT1C LTR MaLR -5 462 23 1805 124 47 15 chr17 76126538 76126812 -9311668 + AluSx SINE Alu 1 283 -29 254 179 18 54 chr17 76126973 76127029 -9311451 + MIR SINE MIR 6 59 -203 342 104 0 0 chr17 76127029 76127077 -9311403 + L1MB2 LINE L1 5933 5980 -191 252 235 16 150 chr17 76127693 76127880 -9310600 + L2 LINE L2 2911 3072 -200 2138 134 0 0 chr17 76127987 76128294 -9310186 - AluSx SINE Alu -5 307 1 1399 103 16 10 chr17 76129015 76129209 -9309271 + AluSg/x SINE Alu 86 280 -32 432 37 0 0 chr17 76129209 76129263 -9309217 + (TAA)n Simple_repeat Simple_repeat 1 54 0 596 322 112 37 chr17 76129458 76130002 -9308478 + L3 LINE CR1 297 881 -696 2109 129 0 3 chr17 76130167 76130462 -9308018 - AluSx SINE Alu -18 294 1 1237 240 109 22 chr17 76131316 76131774 -9306706 - MLT1D LTR MaLR 0 505 8 1872 113 4 0 chr17 76134072 76134328 -9304152 - AluSg SINE Alu -17 293 37 2183 134 0 3 chr17 76135551 76135864 -9302616 - AluSx SINE Alu 0 312 1 21 0 0 0 chr17 76136013 76136034 -9302446 + AT_rich Low_complexity Low_complexity 1 21 0 1175 139 6 8 chr17 76137571 76137775 -9300705 + L1MB3 LINE L1 5443 5622 -561 2976 177 24 13 chr17 76137837 76138386 -9300094 + L1MB3 LINE L1 5626 6180 -3 532 284 35 60 chr17 76138515 76138573 -9299907 + L3 LINE CR1 1209 1267 -310 2860 114 0 8 chr17 76138573 76138951 -9299529 + THE1C LTR MaLR 1 375 0 532 284 35 60 chr17 76138951 76139124 -9299356 + L3 LINE CR1 1267 1434 -143 887 188 67 40 chr17 76139169 76139392 -9299088 + MSTB1 LTR MaLR 1 229 -197 213 182 0 0 chr17 76139400 76139433 -9299047 + polypyrimidine Low_complexity Low_complexity 4 36 0 1397 142 9 17 chr17 76139434 76139666 -9298814 + MSTB1 LTR MaLR 203 432 0 2046 133 7 0 chr17 76140813 76141099 -9297381 - AluSq SINE Alu -25 288 1 1912 93 19 0 chr17 76141113 76141372 -9297108 - AluSq SINE Alu -22 291 28 2559 90 0 0 chr17 76142211 76142522 -9295958 + AluSx SINE Alu 1 311 -1 299 85 0 68 chr17 76142575 76142634 -9295846 + Alu SINE Alu 245 299 -1 2833 259 42 40 chr17 76142798 76143846 -9294634 - L2 LINE L2 -33 3280 2228 2062 153 3 0 chr17 76143846 76144154 -9294326 - AluSx SINE Alu -3 309 1 2833 259 42 40 chr17 76144154 76144224 -9294256 - L2 LINE L2 -1085 2228 2160 955 179 10 35 chr17 76144806 76145007 -9293473 - MLT1A1 LTR MaLR 0 365 170 1500 123 0 5 chr17 76145114 76145318 -9293162 - AluSq SINE Alu -110 203 1 2105 106 31 0 chr17 76146009 76146302 -9292178 + AluSx SINE Alu 1 302 -10 2234 172 19 5 chr17 76146334 76146765 -9291715 - L1MB3 LINE L1 -161 6022 5586 232 298 32 0 chr17 76146768 76146862 -9291618 - MER45C DNA AcHobo -140 813 717 251 220 17 0 chr17 76146906 76146965 -9291515 - MER45C DNA AcHobo -893 60 1 187 323 62 0 chr17 76147315 76147380 -9291100 + MIR SINE MIR 72 140 -68 367 89 71 0 chr17 76147557 76147613 -9290867 + MADE1 DNA Mariner 1 60 -20 2317 100 0 25 chr17 76147613 76147932 -9290548 - AluSx SINE Alu -1 311 1 338 288 24 77 chr17 76147986 76148156 -9290324 + MIR SINE MIR 24 184 -78 1759 178 57 10 chr17 76148403 76148791 -9289689 + L1MB7 LINE L1 5634 6039 -145 227 250 0 0 chr17 76148803 76148855 -9289625 + L1MB5 LINE L1 6012 6063 -111 681 199 0 43 chr17 76148864 76149005 -9289475 + AluJo SINE Alu 2 136 -176 470 93 78 147 chr17 76149015 76149078 -9289402 + L1MB7 LINE L1 6065 6116 -68 2106 157 0 3 chr17 76149078 76149391 -9289089 - AluJb SINE Alu 0 312 1 470 93 78 147 chr17 76149391 76149456 -9289024 + L1MB7 LINE L1 6116 6184 0 1840 190 145 11 chr17 76150123 76150565 -9287915 + MLT1D LTR MaLR 1 501 -4 308 265 37 44 chr17 76150828 76150964 -9287516 - L1ME4a LINE L1 -1 6120 5986 2034 97 8 0 chr17 76151338 76151596 -9286884 + AluSq SINE Alu 1 260 -53 2853 88 14 67 chr17 76151696 76151951 -9286529 - L1PB1 LINE L1 -101 6050 5832 510 17 0 0 chr17 76151951 76152010 -9286470 + (TG)n Simple_repeat Simple_repeat 2 60 0 2853 88 14 67 chr17 76152010 76152244 -9286236 - L1PB1 LINE L1 -319 5832 5587 400 269 43 39 chr17 76152376 76152610 -9285870 + HAL1 LINE L1 847 1081 -1426 1844 145 7 10 chr17 76152900 76153189 -9285291 + AluJb SINE Alu 9 296 -16 416 309 0 24 chr17 76153203 76153357 -9285123 + HAL1 LINE L1 1413 1564 -943 854 153 8 0 chr17 76153357 76153488 -9284992 + FLAM_C SINE Alu 1 132 -1 2371 99 0 3 chr17 76153506 76153810 -9284670 + AluSx SINE Alu 3 305 -7 575 202 9 99 chr17 76154007 76154173 -9284307 + L1MB3 LINE L1 5900 6044 -139 1913 169 3 0 chr17 76154173 76154463 -9284017 + AluSx SINE Alu 1 291 -21 575 202 9 99 chr17 76154463 76154509 -9283971 + L1MB3 LINE L1 6044 6093 -90 2328 91 0 0 chr17 76155200 76155496 -9282984 + AluSx SINE Alu 1 296 -16 1315 100 0 6 chr17 76158126 76158296 -9280184 + AluSq SINE Alu 1 169 -144 2382 84 0 3 chr17 76158788 76159084 -9279396 - AluY SINE Alu -16 295 1 2775 85 3 0 chr17 76159134 76159488 -9278992 - THE1A LTR MaLR 0 355 1 1685 199 0 10 chr17 76160630 76160941 -9277539 - AluJo SINE Alu -4 308 1 2160 82 45 0 chr17 76160944 76161237 -9277243 - AluY SINE Alu 0 305 1 900 128 23 8 chr17 76161237 76161370 -9277110 - AluJo SINE Alu -177 135 1 387 311 75 44 chr17 76161554 76161782 -9276698 - L3b LINE CR1 -89 1494 1260 336 367 73 19 chr17 76162038 76162297 -9276183 + L3 LINE CR1 800 1072 -505 1444 193 0 43 chr17 76162528 76162566 -9275914 + MLT1A1 LTR MaLR 1 39 -326 2337 108 0 0 chr17 76162566 76162863 -9275617 + AluSx SINE Alu 1 297 -15 1444 193 0 43 chr17 76162863 76163125 -9275355 + MLT1A1 LTR MaLR 39 288 -77 670 144 158 0 chr17 76163317 76163456 -9275024 + MER20 DNA MER1_type 40 200 -19 2268 98 0 10 chr17 76165495 76165790 -9272690 - AluSx SINE Alu -20 292 1 1904 152 0 42 chr17 76166351 76166405 -9272075 + Tigger2 DNA MER2_type 423 478 -2240 2504 81 3 0 chr17 76166405 76166713 -9271767 + AluSp SINE Alu 5 313 0 1904 152 0 42 chr17 76166713 76166994 -9271486 + Tigger2 DNA MER2_type 478 744 -1974 252 103 0 206 chr17 76167061 76167110 -9271370 + Tigger2 DNA MER2_type 2461 2482 -236 2620 48 0 10 chr17 76167110 76167421 -9271059 + AluY SINE Alu 1 308 -3 252 103 0 206 chr17 76167421 76167468 -9271012 + Tigger2 DNA MER2_type 2482 2537 -181 1062 170 55 0 chr17 76167475 76167675 -9270805 + Tigger2 DNA MER2_type 2498 2708 -10 25 0 0 0 chr17 76167675 76167700 -9270780 + AT_rich Low_complexity Low_complexity 1 25 0 2236 114 3 0 chr17 76168058 76168347 -9270133 + AluSx SINE Alu 7 296 -16 2512 77 0 3 chr17 76169174 76169485 -9268995 + AluY SINE Alu 1 310 -1 311 281 107 87 chr17 76169513 76169998 -9268482 + MLT1L LTR MaLR 41 457 -54 1086 210 52 52 chr17 76170007 76170179 -9268301 - MER58B DNA MER1_type -2103 317 143 2251 122 0 0 chr17 76170179 76170483 -9267997 - AluSx SINE Alu -8 304 1 1086 210 52 52 chr17 76170483 76170619 -9267861 - MER58B DNA MER1_type -2276 144 9 1670 136 0 0 chr17 76171024 76171245 -9267235 + AluSg/x SINE Alu 75 295 -15 1613 265 37 16 chr17 76171245 76171758 -9266722 - L1ME3 LINE L1 -66 6096 5573 2262 108 20 13 chr17 76171835 76172141 -9266339 - AluSx SINE Alu 0 312 5 225 239 60 15 chr17 76172212 76172279 -9266201 + HAL1 LINE L1 10 79 -2428 342 353 125 37 chr17 76172394 76172850 -9265630 + HAL1 LINE L1 201 696 -1811 1680 159 53 82 chr17 76172856 76173310 -9265170 - LTR8A LTR ERV1 0 727 287 718 206 110 147 chr17 76173366 76173658 -9264822 - LTR8 LTR ERV1 -435 256 1 1986 227 114 82 chr17 76173824 76174622 -9263858 - MER21B LTR ERV1 -39 824 1 1037 237 138 63 chr17 76174643 76175048 -9263432 + HAL1 LINE L1 854 1228 -1279 2267 100 0 0 chr17 76175048 76175338 -9263142 + AluSx SINE Alu 1 290 -22 1037 237 138 63 chr17 76175338 76175674 -9262806 + HAL1 LINE L1 1228 1650 -857 2072 134 3 22 chr17 76175880 76176194 -9262286 + AluSg SINE Alu 3 310 0 2301 103 0 3 chr17 76176851 76177151 -9261329 - AluSx SINE Alu -13 299 1 270 0 0 0 chr17 76177537 76177567 -9260913 + (TG)n Simple_repeat Simple_repeat 2 31 0 267 295 74 41 chr17 76178791 76178913 -9259567 + MIR3 SINE MIR 35 160 -48 200 208 0 21 chr17 76179178 76179226 -9259254 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 868 169 0 0 chr17 76180593 76180723 -9257757 + FRAM SINE Alu 16 145 -31 228 35 0 0 chr17 76180723 76180752 -9257728 + (CA)n Simple_repeat Simple_repeat 2 30 0 225 189 19 19 chr17 76181131 76181184 -9257296 - MER58B DNA MER1_type -287 54 2 1637 157 6 92 chr17 76181713 76182050 -9256430 - AluJb SINE Alu -4 308 1 498 309 96 3 chr17 76182608 76182922 -9255558 - L1M4 LINE L1 -3572 2574 2232 1133 196 5 5 chr17 76183118 76183317 -9255163 - AluJb SINE Alu -18 294 96 1191 112 11 17 chr17 76183326 76183504 -9254976 - AluSx SINE Alu -135 177 1 434 250 114 15 chr17 76183504 76183636 -9254844 + MER58B DNA MER1_type 196 340 -1 702 122 12 5 chr17 76183794 76183921 -9254559 + MSTA LTR MaLR 2 134 -241 992 164 50 199 chr17 76183999 76184163 -9254317 - L1MD3 LINE L1 0 7995 7808 1925 119 4 4 chr17 76184163 76184464 -9254016 - AluSx SINE Alu 0 321 21 992 164 50 199 chr17 76184464 76184514 -9253966 - L1MD3 LINE L1 -187 7808 7752 1664 116 142 11 chr17 76184514 76184781 -9253699 - AluSx SINE Alu 0 302 1 992 164 50 199 chr17 76184781 76185046 -9253434 - L1MD3 LINE L1 -243 7752 7586 222 37 0 0 chr17 76185908 76185935 -9252545 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 318 335 49 34 chr17 76188486 76188814 -9249666 - L2 LINE L2 -1020 2294 1962 243 0 0 0 chr17 76190059 76190086 -9248394 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 728 220 5 31 chr17 76190128 76190319 -9248161 + MLT1C LTR MaLR 1 186 -281 1832 186 0 10 chr17 76190319 76190630 -9247850 + AluSx SINE Alu 1 308 -4 399 269 8 46 chr17 76190928 76191058 -9247422 + MER115 DNA AcHobo 162 286 -407 425 285 90 0 chr17 76191112 76191256 -9247224 + MER115 DNA AcHobo 411 567 -126 257 154 34 34 chr17 76191277 76191426 -9247054 + (TA)n Simple_repeat Simple_repeat 1 149 0 221 125 0 21 chr17 76191425 76191473 -9247007 + (GA)n Simple_repeat Simple_repeat 2 48 0 * 499 248 0 0 chr17 76191485 76191590 -9246890 + MER115 DNA AcHobo 589 693 0 1857 148 28 65 chr17 76191809 76192133 -9246347 - AluJo SINE Alu 0 312 1 2315 119 122 10 chr17 76193171 76193556 -9244924 + MSTA LTR MaLR 1 428 0 9053 171 34 4 chr17 76193558 76195158 -9243322 + MSTA-int LTR MaLR 3 1651 0 2387 125 120 5 chr17 76195158 76195542 -9242938 + MSTA LTR MaLR 1 428 0 3890 149 35 18 chr17 76195831 76196549 -9241931 + L1MB7 LINE L1 5375 6104 -80 558 143 0 0 chr17 76196649 76196733 -9241747 + AluJ/FRAM SINE Alu 222 305 -7 705 311 64 8 chr17 76196840 76197075 -9241405 + MIR SINE MIR 15 262 0 633 235 146 87 chr17 76197757 76198137 -9240343 + MER57B LTR ERV1 1 404 -30 2334 73 3 13 chr17 76198177 76198491 -9239989 + AluY SINE Alu 1 311 0 252 184 0 0 chr17 76198816 76198865 -9239615 + MER4-int LTR ERV1 1112 1160 -5438 234 0 0 0 chr17 76199264 76199290 -9239190 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 1600 165 0 45 chr17 76199293 76199584 -9238896 - AluJb SINE Alu -34 278 1 597 247 54 12 chr17 76200374 76200540 -9237940 - MIR SINE MIR -75 187 15 2399 51 0 3 chr17 76201871 76202166 -9236314 + AluY SINE Alu 1 294 -17 324 261 144 20 chr17 76202249 76202402 -9236078 - L1ME LINE L1 -347 5774 5603 287 255 91 14 chr17 76202436 76202624 -9235856 - L1M2 LINE L1 -690 5431 5338 2154 110 0 0 chr17 76202937 76203229 -9235251 - AluSx SINE Alu -12 300 9 7012 178 9 14 chr17 76203230 76205376 -9233104 - L1PA14 LINE L1 0 6161 4029 1033 262 165 16 chr17 76207820 76208262 -9230218 - MLT1J LTR MaLR 0 511 4 257 364 20 36 chr17 76208314 76208509 -9229971 - L2 LINE L2 -455 2859 2668 1776 188 27 33 chr17 76208737 76209104 -9229376 - MLT1A1 LTR MaLR 0 365 1 435 291 63 89 chr17 76209311 76209658 -9228822 + HAL1b LINE L1 77 414 -934 502 204 176 0 chr17 76210026 76210134 -9228346 + FLAM_C SINE Alu 2 128 -5 2331 77 0 10 chr17 76210185 76210495 -9227985 + AluY SINE Alu 1 307 -4 1716 192 43 48 chr17 76210878 76211294 -9227186 - MLT2D LTR ERVL 0 414 1 856 164 6 82 chr17 76211959 76211982 -9226498 - MER33 DNA MER1_type -2414 171 148 1508 176 0 77 chr17 76211982 76212306 -9226174 - AluJo SINE Alu -3 299 1 856 164 6 82 chr17 76212306 76212465 -9226015 - MER33 DNA MER1_type -2437 148 3 524 226 148 7 chr17 76212477 76212632 -9225848 - MER5B DNA MER1_type 0 178 2 331 268 63 24 chr17 76213601 76213728 -9224752 - MLT1K LTR MaLR -395 193 62 1072 251 117 30 chr17 76214247 76214682 -9223798 - MLT1K LTR MaLR -3 473 1 763 326 5 13 chr17 76215046 76215270 -9223210 + MIR SINE MIR 21 242 -20 1982 120 3 0 chr17 76215285 76215568 -9222912 - AluSg SINE Alu -17 293 10 2330 97 0 0 chr17 76216494 76216804 -9221676 - AluSx SINE Alu -2 310 1 722 165 203 28 chr17 76216946 76217128 -9221352 - MER20 DNA MER1_type -3 216 3 273 125 0 0 chr17 76217153 76217193 -9221287 - L2 LINE L2 -24 3289 3250 1419 223 0 16 chr17 76217331 76217640 -9220840 - AluJo SINE Alu -8 304 1 749 194 0 36 chr17 76217640 76217779 -9220701 - AluJo SINE Alu -177 135 2 2178 119 3 0 chr17 76217788 76218151 -9220329 - AluSx SINE Alu 0 364 1 203 298 145 8 chr17 76218259 76218390 -9220090 - L3b LINE CR1 -250 1333 1185 2202 124 39 33 chr17 76218604 76218966 -9219514 + THE1B LTR MaLR 1 364 0 1628 110 13 0 chr17 76220201 76220428 -9218052 - MER30 DNA MER1_type 0 230 1 2376 63 3 0 chr17 76220469 76220769 -9217711 + AluY SINE Alu 1 301 -10 297 225 337 0 chr17 76220857 76220946 -9217534 + L2 LINE L2 3195 3313 0 302 219 104 21 chr17 76221133 76221229 -9217251 - L1MC5 LINE L1 -26 7935 7832 1884 150 3 0 chr17 76222217 76222517 -9215963 + AluJb SINE Alu 5 305 -7 205 323 79 0 chr17 76222658 76222785 -9215695 + MIR SINE MIR 118 254 -8 23 78 0 0 chr17 76222806 76222857 -9215623 + AT_rich Low_complexity Low_complexity 1 51 0 1078 190 18 47 chr17 76222987 76223261 -9215219 + L1MB8 LINE L1 5913 6178 0 946 239 86 54 chr17 76223839 76224190 -9214290 + MLT1D LTR MaLR 1 362 -143 394 189 57 57 chr17 76224193 76224315 -9214165 - MIR SINE MIR -126 136 15 1646 136 27 20 chr17 76224801 76225095 -9213385 + AluJb SINE Alu 1 296 -16 762 247 57 10 chr17 76229854 76230048 -9208432 + MER3 DNA MER1_type 1 203 -6 2009 126 0 0 chr17 76230072 76230398 -9208082 + AluSx SINE Alu 1 326 0 1815 113 4 0 chr17 76231198 76231455 -9207025 - AluJb SINE Alu -16 296 39 307 325 63 40 chr17 76231540 76231666 -9206814 - MIR SINE MIR -111 151 23 211 257 92 64 chr17 76232026 76232079 -9206401 + MIR SINE MIR 35 85 -177 1952 139 0 0 chr17 76232079 76232373 -9206107 - AluJb SINE Alu -18 294 1 211 257 92 64 chr17 76232373 76232428 -9206052 + MIR SINE MIR 85 146 -116 2015 94 11 0 chr17 76233154 76233429 -9205051 - AluSq SINE Alu -35 278 1 325 295 121 13 chr17 76233528 76233677 -9204803 - MIR SINE MIR -18 244 80 5028 76 2 0 chr17 76234098 76234731 -9203749 + MER41B LTR ERV1 2 635 0 336 183 12 37 chr17 76235298 76235380 -9203100 + MER116 DNA Mariner 1 80 0 308 229 124 9 chr17 76235402 76235507 -9202973 - MER103 DNA DNA -48 118 2 260 310 14 0 chr17 76235677 76235748 -9202732 - L2 LINE L2 0 3313 3242 2989 157 109 47 chr17 76236893 76237569 -9200911 + LTR8A LTR ERV1 1 718 -9 227 121 0 0 chr17 76238339 76238372 -9200108 - L1M4 LINE L1 -533 5651 5619 318 283 67 8 chr17 76238376 76238496 -9199984 + L2 LINE L2 2693 2819 -495 285 380 26 9 chr17 76238605 76238718 -9199762 + L2 LINE L2 2967 3081 -191 3101 82 67 19 chr17 76238749 76239213 -9199267 + LTR19A LTR ERV1 1 486 0 226 328 0 0 chr17 76239277 76239335 -9199145 - L2 LINE L2 -16 3297 3240 424 264 126 46 chr17 76239419 76239658 -9198822 - L2 LINE L2 -46 3267 3010 278 284 37 73 chr17 76239654 76239763 -9198717 + L2 LINE L2 3137 3241 -31 * 2926 160 141 21 chr17 76239843 76240469 -9198011 - LTR8A LTR ERV1 -26 701 1 2203 98 0 0 chr17 76240750 76241075 -9197405 - AluY SINE Alu 0 311 1 567 100 11 11 chr17 76241330 76241431 -9197049 + L1MB3 LINE L1 5758 5858 -325 468 156 89 0 chr17 76241431 76241521 -9196959 + MER4A LTR ERV1 1 98 -566 2104 90 0 0 chr17 76241556 76241835 -9196645 - AluSc SINE Alu -7 302 24 1891 129 0 79 chr17 76241876 76242194 -9196286 + MER4A LTR ERV1 372 664 0 1239 135 27 5 chr17 76242194 76242416 -9196064 + L1MB3 LINE L1 5855 6081 -102 889 221 72 29 chr17 76242405 76242705 -9195775 + LTR16B LTR ERVL 158 462 -2 * 187 288 17 17 chr17 76243019 76243078 -9195402 - MIR SINE MIR 0 262 204 1657 119 126 19 chr17 76243116 76243385 -9195095 + AluSx SINE Alu 1 298 -14 221 337 0 56 chr17 76244652 76244741 -9193739 + L2 LINE L2 3188 3271 -1 2498 98 0 6 chr17 76244817 76245132 -9193348 + AluSq SINE Alu 1 313 0 2203 135 30 28 chr17 76245283 76245646 -9192834 + THE1B LTR MaLR 1 364 0 441 0 0 0 chr17 76245660 76245709 -9192771 + (CA)n Simple_repeat Simple_repeat 2 50 0 180 0 0 0 chr17 76248640 76248660 -9189820 + (A)n Simple_repeat Simple_repeat 1 20 0 287 299 102 45 chr17 76248712 76248869 -9189611 - MIR SINE MIR -21 241 76 236 303 11 22 chr17 76248976 76249065 -9189415 + MIR SINE MIR 105 192 -70 1780 206 49 31 chr17 76249370 76249822 -9188658 + MLT1C LTR MaLR 6 465 -2 199 321 107 18 chr17 76249838 76249870 -9188610 - MIR SINE MIR -28 234 206 471 78 0 0 chr17 76249870 76249934 -9188546 + (TATG)n Simple_repeat Simple_repeat 3 66 0 2204 118 0 0 chr17 76249939 76250227 -9188253 - AluSx SINE Alu -24 288 1 199 321 107 18 chr17 76250227 76250300 -9188180 - MIR SINE MIR -59 203 113 1841 120 71 0 chr17 76251184 76251482 -9186998 + AluSx SINE Alu 1 317 0 336 360 58 0 chr17 76251822 76252047 -9186433 + MER115 DNA AcHobo 5 242 -451 2218 110 3 3 chr17 76252729 76253029 -9185451 + AluSp SINE Alu 2 301 -12 2304 112 13 0 chr17 76253437 76253742 -9184738 - AluY SINE Alu -2 309 1 25 31 0 0 chr17 76253911 76253943 -9184537 + AT_rich Low_complexity Low_complexity 1 32 0 1538 209 31 58 chr17 76254005 76254455 -9184025 + MLT1C LTR MaLR 30 467 0 1533 176 4 0 chr17 76254494 76254732 -9183748 + AluSg/x SINE Alu 69 307 -3 2242 128 0 3 chr17 76254735 76255047 -9183433 + AluSx SINE Alu 1 311 -1 826 167 6 39 chr17 76255191 76255347 -9183133 + MLT1A1 LTR MaLR 215 365 0 268 380 19 60 chr17 76255497 76255713 -9182767 - L2 LINE L2 -956 2358 2152 2097 135 0 0 chr17 76256080 76256383 -9182097 + AluSx SINE Alu 1 303 -9 2471 133 67 10 chr17 76256527 76256865 -9181615 + MSTA LTR MaLR 1 367 -61 2332 92 0 26 chr17 76256865 76257170 -9181310 - AluSg SINE Alu 0 310 14 2471 133 67 10 chr17 76257170 76257236 -9181244 + MSTA LTR MaLR 367 428 0 2276 114 3 0 chr17 76258838 76259137 -9179343 - AluSq SINE Alu -13 300 1 2572 59 3 0 chr17 76259271 76259575 -9178905 - AluY SINE Alu -6 305 1 555 259 17 40 chr17 76260087 76260190 -9178290 - MIR SINE MIR -3 259 160 2486 117 30 8 chr17 76260190 76260557 -9177923 + THE1C LTR MaLR 1 375 0 555 259 17 40 chr17 76260557 76260627 -9177853 - MIR SINE MIR -102 160 90 880 262 97 65 chr17 76260636 76261109 -9177371 - LTR53 LTR ERVL -11 508 21 296 202 12 83 chr17 76261122 76261206 -9177274 - MIR SINE MIR -184 78 1 893 112 0 70 chr17 76262159 76262302 -9176178 - FLAM_C SINE Alu 0 133 1 392 320 28 49 chr17 76262998 76263355 -9175125 + L2 LINE L2 2709 3059 -213 520 159 13 24 chr17 76263358 76263474 -9175006 - MLT1F1 LTR MaLR 0 584 470 409 248 23 45 chr17 76263524 76263657 -9174823 + HAL1 LINE L1 1544 1673 -834 1547 191 88 119 chr17 76263665 76264247 -9174233 - MLT1F1 LTR MaLR 0 567 4 330 317 100 8 chr17 76264380 76264500 -9173980 + L2 LINE L2 3181 3311 -2 436 103 0 0 chr17 76265315 76265373 -9173107 - AluSq SINE Alu -114 199 142 207 233 163 12 chr17 76265835 76265921 -9172559 + MIR SINE MIR 47 145 -117 364 340 97 5 chr17 76266195 76266380 -9172100 - MIR SINE MIR -48 214 13 1560 177 44 73 chr17 76266763 76266980 -9171500 - MLT1A2 LTR MaLR 0 374 171 1821 140 104 0 chr17 76266980 76267258 -9171222 - AluSx SINE Alu -5 307 1 1560 177 44 73 chr17 76267258 76267425 -9171055 - MLT1A2 LTR MaLR -203 171 1 4556 59 19 6 chr17 76267673 76268692 -9169788 + MER11A LTR ERVK 1 1266 0 186 285 55 91 chr17 76268755 76268877 -9169603 - L2 LINE L2 -1256 2058 1948 2484 89 3 0 chr17 76268877 76269181 -9169299 - AluSx SINE Alu -7 305 1 186 285 55 91 chr17 76269181 76269311 -9169169 - L2 LINE L2 -1366 1948 1815 1856 172 27 48 chr17 76269513 76269790 -9168690 + L1MB8 LINE L1 5775 6042 -136 2064 140 0 19 chr17 76269790 76270098 -9168382 - AluSx SINE Alu -10 302 1 1856 172 27 48 chr17 76270098 76270232 -9168248 + L1MB8 LINE L1 6042 6177 -1 527 208 35 15 chr17 76270294 76270452 -9168028 + L1MB7 LINE L1 6019 6177 -1 2266 141 0 0 chr17 76270879 76271192 -9167288 + AluSq SINE Alu 1 313 0 1644 52 0 5 chr17 76272590 76272784 -9165696 - AluY SINE Alu -35 276 84 423 231 103 103 chr17 76273160 76273319 -9165161 + MIR3 SINE MIR 3 164 -44 2128 101 17 3 chr17 76273319 76273607 -9164873 + AluSc SINE Alu 8 299 -10 423 231 103 103 chr17 76273607 76273650 -9164830 + MIR3 SINE MIR 163 205 -3 864 172 17 101 chr17 76323770 76323809 -9114671 - L1MB5 LINE L1 -316 5858 5817 2065 72 48 20 chr17 76323809 76324102 -9114378 - AluY SINE Alu -6 305 5 1675 143 16 33 chr17 76324109 76324416 -9114064 - AluJb SINE Alu -10 302 1 864 172 17 101 chr17 76324416 76324606 -9113874 - L1MB5 LINE L1 -363 5811 5641 703 191 0 22 chr17 76324892 76325028 -9113452 + FLAM_A SINE Alu 1 133 0 186 133 0 0 chr17 76325055 76325085 -9113395 + (T)n Simple_repeat Simple_repeat 1 30 0 419 301 89 39 chr17 76325195 76325258 -9113222 + L2 LINE L2 3042 3100 -213 1868 133 13 10 chr17 76325258 76325560 -9112920 - AluSx SINE Alu -7 305 3 419 301 89 39 chr17 76325560 76325755 -9112725 + L2 LINE L2 3100 3313 0 1353 109 0 0 chr17 76326746 76326930 -9111550 - AluSx SINE Alu -123 189 6 335 352 45 57 chr17 76327541 76327732 -9110748 + L1MEc LINE L1 111 303 -6093 1988 119 16 3 chr17 76327732 76328035 -9110445 + AluSx SINE Alu 1 307 -5 335 352 45 57 chr17 76328035 76328568 -9109912 + L1MEc LINE L1 303 827 -5569 1159 161 5 0 chr17 76328568 76328760 -9109720 + AluSq SINE Alu 1 193 -120 1189 23 0 0 chr17 76328860 76328993 -9109487 - AluY SINE Alu -178 133 1 870 210 101 8 chr17 76329345 76329583 -9108897 - ORSL DNA AcHobo -15 260 1 4196 46 16 0 chr17 76330179 76330696 -9107784 + L1PA5 LINE L1 5546 6070 -84 266 286 55 9 chr17 76330878 76331096 -9107384 + L1MEc LINE L1 1351 1434 -5425 * 2383 249 52 79 chr17 76331082 76332226 -9106254 + L1MEc LINE L1 2113 3225 -3913 1268 169 59 44 chr17 76332392 76332664 -9105816 + MLT1A2 LTR MaLR 1 276 -98 693 103 0 0 chr17 76332780 76332877 -9105603 + AluSg/x SINE Alu 213 309 -1 320 261 72 9 chr17 76332877 76332988 -9105492 + L1ME2 LINE L1 6043 6160 -4 225 0 0 0 chr17 76333358 76333383 -9105097 + (A)n Simple_repeat Simple_repeat 1 25 0 478 196 0 9 chr17 76334438 76334545 -9103935 + MER53 DNA DNA 1 106 -83 210 91 0 0 chr17 76334588 76334621 -9103859 + (TC)n Simple_repeat Simple_repeat 2 34 0 1693 163 24 0 chr17 76334636 76334931 -9103549 + AluJb SINE Alu 1 302 -10 1363 110 5 0 chr17 76335032 76335223 -9103257 + AluSq SINE Alu 105 296 -17 519 95 24 0 chr17 76335247 76335331 -9103149 - L1MA1 LINE L1 -176 6126 6041 345 218 26 13 chr17 76335856 76335934 -9102546 + L2 LINE L2 3235 3313 0 392 320 48 27 chr17 76336285 76336432 -9102048 - MER5B DNA MER1_type -28 150 1 433 231 96 32 chr17 76336643 76336799 -9101681 + MER5A DNA MER1_type 22 187 -2 1745 52 0 0 chr17 76336939 76337150 -9101330 + L1PA5 LINE L1 5939 6149 -5 1359 159 10 42 chr17 76337158 76337447 -9101033 - L1MB5 LINE L1 -8 6166 5887 935 167 0 6 chr17 76337550 76337718 -9100762 + AluSg/x SINE Alu 134 300 -9 22 0 0 0 chr17 76337718 76337740 -9100740 + AT_rich Low_complexity Low_complexity 1 22 0 764 204 45 82 chr17 76338095 76338315 -9100165 + MER58C DNA MER1_type 1 212 -3 297 75 0 0 chr17 76338398 76338438 -9100042 + (CA)n Simple_repeat Simple_repeat 2 41 0 262 279 16 0 chr17 76338611 76338672 -9099808 - L2 LINE L2 -24 3248 3187 319 274 44 9 chr17 76338688 76338801 -9099679 - L2 LINE L2 0 3313 3197 1942 134 7 0 chr17 76338887 76339179 -9099301 + AluSq SINE Alu 1 294 -19 927 108 0 0 chr17 76339567 76339697 -9098783 + AluSq/x SINE Alu 1 130 -182 195 296 23 106 chr17 76339797 76339929 -9098551 + L2 LINE L2 2951 3071 -201 2052 103 0 7 chr17 76341240 76341540 -9096940 - AluSq SINE Alu -7 306 9 264 178 22 0 chr17 76341559 76341604 -9096876 + LTR67 LTR ERVL 33 78 -479 394 196 18 30 chr17 76341728 76341896 -9096584 + CT-rich Low_complexity Low_complexity 6 171 0 642 248 15 40 chr17 76341993 76342191 -9096289 + LTR67 LTR ERVL 361 553 -4 678 244 203 0 chr17 76342259 76342476 -9096004 + LTR50 LTR ERVL 19 279 -516 1184 214 5 0 chr17 76342598 76342818 -9095662 + MLT1D LTR MaLR 285 505 0 3708 155 22 50 chr17 76342836 76343039 -9095441 - L1MC1 LINE L1 -8 6325 6118 2012 145 0 0 chr17 76343039 76343349 -9095131 - AluSx SINE Alu -2 310 1 3708 155 22 50 chr17 76343349 76343882 -9094598 - L1MC1 LINE L1 -215 6118 5610 1883 147 0 3 chr17 76344543 76344856 -9093624 + AluSx SINE Alu 1 312 0 980 92 8 0 chr17 76345019 76345150 -9093330 + AluSq/x SINE Alu 1 132 -181 1931 215 144 30 chr17 76345251 76345912 -9092568 - MER31-int LTR ERV1 -1719 3217 2482 2201 102 3 3 chr17 76345955 76346268 -9092212 - AluSq SINE Alu 0 313 1 548 237 75 44 chr17 76346356 76346526 -9091954 - MER31-int LTR ERV1 -2640 2296 2133 1831 102 49 3 chr17 76346526 76346810 -9091670 - AluSq SINE Alu -14 299 3 548 237 75 44 chr17 76346810 76347276 -9091204 - MER31-int LTR ERV1 -2803 2133 1743 244 244 0 0 chr17 76347278 76347323 -9091157 + MER34 LTR ERV1 1 45 -497 1950 132 0 0 chr17 76347459 76347755 -9090725 - AluSx SINE Alu -16 296 1 490 239 149 0 chr17 76348038 76348172 -9090308 - MER34C LTR ERV1 -273 312 159 837 137 0 0 chr17 76348246 76348377 -9090103 - AluSg/x SINE Alu -17 295 165 649 196 46 0 chr17 76348489 76348642 -9089838 + MLT1E3 LTR MaLR 188 347 -307 2079 119 0 0 chr17 76348719 76349013 -9089467 + AluSx SINE Alu 1 294 -18 1189 234 20 17 chr17 76349038 76349333 -9089147 + MLT1E3 LTR MaLR 315 610 -14 5745 53 6 0 chr17 76349655 76350358 -9088122 - L1PA6 LINE L1 0 6154 5448 1566 163 36 7 chr17 76350718 76350886 -9087594 - AluJo SINE Alu -2 310 128 219 36 0 0 chr17 76350886 76350914 -9087566 + (TTTAA)n Simple_repeat Simple_repeat 3 30 0 1566 163 36 7 chr17 76350914 76351046 -9087434 - AluJo SINE Alu -184 128 1 324 217 0 0 chr17 76351117 76351209 -9087271 + (TCTA)n Simple_repeat Simple_repeat 4 95 0 186 43 0 0 chr17 76351232 76351255 -9087225 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 888 124 0 7 chr17 76351681 76351818 -9086662 + THE1B LTR MaLR 3 138 -226 482 296 87 13 chr17 76351929 76352184 -9086296 + L1ME3A LINE L1 5665 5935 -227 362 285 135 52 chr17 76352248 76352441 -9086039 + L1ME3A LINE L1 5962 6170 0 191 294 59 69 chr17 76352737 76352839 -9085641 - L2 LINE L2 -44 3228 3128 396 197 158 26 chr17 76352944 76353096 -9085384 + MLT1H LTR MaLR 3 174 -375 266 263 53 21 chr17 76353066 76353161 -9085319 + MLT1J1 LTR MaLR 78 175 -271 * 2578 184 34 7 chr17 76353229 76353674 -9084806 + MLT2B1 LTR ERVL 1 457 -63 288 349 112 32 chr17 76353728 76354066 -9084414 + L2 LINE L2 2488 2852 -462 1961 199 57 14 chr17 76354173 76354614 -9083866 - MLT1C LTR MaLR -2 465 6 751 254 153 33 chr17 76354619 76355012 -9083468 + MLT1H LTR MaLR 110 549 0 2199 83 3 0 chr17 76355087 76355375 -9083105 - AluSx SINE Alu -23 289 1 1562 198 46 20 chr17 76355377 76355680 -9082800 + Tigger7 DNA MER2_type 2 312 -421 2099 124 0 0 chr17 76355798 76356096 -9082384 - AluSx SINE Alu -14 298 1 1844 130 32 0 chr17 76356100 76356385 -9082095 - AluSx SINE Alu -18 294 1 403 169 0 0 chr17 76356389 76356454 -9082026 - L1PA16 LINE L1 -226 5940 5876 238 284 0 99 chr17 76356459 76356540 -9081940 - MER58 DNA MER1_type -2153 267 195 1159 96 188 20 chr17 76356582 76356779 -9081701 - MER30 DNA MER1_type 0 230 1 1579 173 11 7 chr17 76357376 76357660 -9080820 + AluJo SINE Alu 4 288 -24 2076 116 7 0 chr17 76358577 76358879 -9079601 - AluSx SINE Alu -8 304 1 272 321 42 5 chr17 76358994 76359153 -9079327 + MIR SINE MIR 43 205 -57 1982 120 0 3 chr17 76359349 76359632 -9078848 - AluSx SINE Alu -30 282 1 1354 202 66 13 chr17 76359632 76359934 -9078546 - MLT1A1 LTR MaLR -47 318 1 414 0 0 0 chr17 76360122 76360168 -9078312 + (CA)n Simple_repeat Simple_repeat 2 47 0 820 186 37 37 chr17 76361000 76361150 -9077330 + MER20 DNA MER1_type 29 181 -38 1839 154 3 3 chr17 76361150 76361449 -9077031 + AluJb SINE Alu 1 299 -13 820 186 37 37 chr17 76361449 76361486 -9076994 + MER20 DNA MER1_type 180 216 -3 431 251 77 56 chr17 76361616 76361811 -9076669 - L2 LINE L2 -1 3312 3114 245 227 0 0 chr17 76361896 76361940 -9076540 - MIR SINE MIR -32 230 187 213 39 0 0 chr17 76362835 76362861 -9075619 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 213 203 0 54 chr17 76363179 76363253 -9075227 + CT-rich Low_complexity Low_complexity 2 71 0 1711 109 4 12 chr17 76364204 76364460 -9074020 - AluSx SINE Alu -2 310 57 1929 133 6 19 chr17 76365464 76365779 -9072701 - AluSx SINE Alu -1 311 1 644 295 145 44 chr17 76366896 76367378 -9071102 - MLT1H LTR MaLR 0 549 19 1987 141 0 0 chr17 76367601 76367905 -9070575 + AluSx SINE Alu 1 304 -8 961 136 0 19 chr17 76367905 76368059 -9070421 + AluSg/x SINE Alu 134 284 -28 3347 158 21 15 chr17 76368070 76368633 -9069847 + L1PB1 LINE L1 4781 5359 -792 2209 116 0 0 chr17 76368633 76368944 -9069536 + AluSx SINE Alu 1 311 -1 3347 158 21 15 chr17 76368944 76369379 -9069101 + L1PB1 LINE L1 5359 5790 -361 270 0 0 0 chr17 76369390 76369420 -9069060 + (TA)n Simple_repeat Simple_repeat 1 30 0 2384 126 6 6 chr17 76369420 76369786 -9068694 + L1PB1 LINE L1 5782 6147 -4 380 191 71 0 chr17 76370046 76370130 -9068350 - MER103 DNA DNA -69 97 8 256 362 0 9 chr17 76370352 76370457 -9068023 + MER5B DNA MER1_type 3 106 -72 397 278 174 7 chr17 76370577 76370721 -9067759 + MER5A DNA MER1_type 21 188 -1 753 110 0 0 chr17 76370750 76370850 -9067630 + AluS SINE Alu 2 101 -212 2172 182 49 2 chr17 76370951 76371358 -9067122 + MSTB LTR MaLR 1 426 0 1609 82 30 59 chr17 76371997 76372176 -9066304 - L1MA1 LINE L1 0 6302 6131 1719 155 0 28 chr17 76372176 76372493 -9065987 + AluSx SINE Alu 1 309 0 1609 82 30 59 chr17 76372493 76372582 -9065898 - L1MA1 LINE L1 -171 6131 6041 637 156 0 0 chr17 76372582 76372691 -9065789 - L1MB2 LINE L1 -117 6054 5946 228 67 0 0 chr17 76372694 76372724 -9065756 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1323 106 0 0 chr17 76372727 76372906 -9065574 - AluSg/x SINE Alu -25 287 109 775 151 0 43 chr17 76372935 76373063 -9065417 + AluSq/x SINE Alu 2 125 -187 656 183 0 23 chr17 76373063 76373194 -9065286 + L1MB2 LINE L1 6044 6171 0 1915 131 0 32 chr17 76374420 76374733 -9063747 - AluSx SINE Alu -9 303 1 2224 99 0 10 chr17 76375350 76375664 -9062816 - AluSx SINE Alu -1 311 1 1097 280 33 46 chr17 76375708 76376075 -9062405 - L1MB2 LINE L1 -380 5790 5436 2066 131 0 6 chr17 76376075 76376389 -9062091 + AluSq SINE Alu 1 312 -1 1097 280 33 46 chr17 76376389 76376690 -9061790 - L1MB2 LINE L1 -734 5436 5133 277 105 0 0 chr17 76376694 76376732 -9061748 + MER5B DNA MER1_type 16 53 -125 1215 199 111 14 chr17 76376840 76377217 -9061263 + LTR50 LTR ERVL 298 793 -2 1866 19 0 0 chr17 76377244 76377453 -9061027 + L1PA3 LINE L1 5947 6155 0 794 218 0 6 chr17 76377958 76378132 -9060348 - MER104 DNA Tc2 -7 173 1 396 265 197 27 chr17 76378133 76378280 -9060200 - MIR SINE MIR -68 194 23 1001 215 11 29 chr17 76378539 76378992 -9059488 - MLT1D LTR MaLR 0 505 1 2078 102 0 0 chr17 76379680 76379955 -9058525 + AluSx SINE Alu 1 275 -37 1249 62 0 11 chr17 76379959 76380137 -9058343 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 1290 231 65 19 chr17 76380137 76380462 -9058018 - MLT1A2 LTR MaLR -34 340 1 1643 118 76 8 chr17 76380863 76381154 -9057326 - AluSx SINE Alu 0 309 1 550 292 43 28 chr17 76381316 76381638 -9056842 - L1PB4 LINE L1 -272 5884 5558 281 333 90 14 chr17 76382230 76382374 -9056106 - MER5B DNA MER1_type -18 160 6 2139 118 0 3 chr17 76382917 76383230 -9055250 - AluSq SINE Alu -1 312 1 294 257 76 9 chr17 76384118 76384223 -9054257 - HAL1 LINE L1 -1910 597 486 345 273 105 7 chr17 76384227 76384370 -9054110 - HAL1 LINE L1 -2083 424 268 238 272 194 28 chr17 76384413 76384593 -9053887 - HAL1 LINE L1 -2297 210 1 2051 145 0 0 chr17 76384734 76385044 -9053436 - AluSx SINE Alu 0 312 3 1232 169 15 30 chr17 76385063 76385330 -9053150 - L1MD3 LINE L1 -2 7993 7731 428 293 8 23 chr17 76385855 76385988 -9052492 + MIR3 SINE MIR 73 203 -5 444 277 124 28 chr17 76386564 76386741 -9051739 - MIR SINE MIR -58 204 11 277 119 0 51 chr17 76387133 76387192 -9051288 - LTR49-int LTR ERV1 -6741 796 741 1295 178 36 53 chr17 76387256 76387559 -9050921 + AluJb SINE Alu 1 298 -14 450 294 68 52 chr17 76387926 76388052 -9050428 - LTR49-int LTR ERV1 -4150 2181 2058 2208 105 0 0 chr17 76388052 76388358 -9050122 + AluSx SINE Alu 1 306 -6 450 294 68 52 chr17 76388358 76388483 -9049997 - LTR49-int LTR ERV1 -4273 2058 1926 671 211 145 14 chr17 76388507 76388741 -9049739 - MER57A LTR ERV1 0 510 132 625 146 52 0 chr17 76388763 76388859 -9049621 + AluJ SINE Alu 11 111 -201 1107 157 26 5 chr17 76388900 76389091 -9049389 + AluJ SINE Alu 108 302 -10 1912 118 0 0 chr17 76389693 76389956 -9048524 - AluSx SINE Alu -10 302 40 412 273 83 0 chr17 76389973 76390105 -9048375 + L2 LINE L2 3168 3310 -3 2107 108 10 0 chr17 76390133 76390438 -9048042 - AluSg SINE Alu -2 308 1 949 291 4 13 chr17 76390826 76391063 -9047417 + MIR SINE MIR 28 262 0 22 0 0 0 chr17 76391257 76391279 -9047201 + AT_rich Low_complexity Low_complexity 1 22 0 509 188 0 0 chr17 76391312 76391408 -9047072 - AluSg/x SINE Alu -7 305 210 1930 99 0 4 chr17 76391520 76391782 -9046698 + AluSx SINE Alu 1 261 -51 343 291 63 63 chr17 76391908 76392365 -9046115 - HAL1 LINE L1 -1167 1340 884 346 263 32 11 chr17 76392450 76392545 -9045935 - MIR SINE MIR -59 203 107 2021 130 0 0 chr17 76392645 76392945 -9045535 - AluSx SINE Alu -12 300 1 229 254 61 9 chr17 76392975 76393089 -9045391 + L2 LINE L2 2357 2476 -838 1166 224 174 12 chr17 76393215 76393536 -9044944 + MLT1C LTR MaLR 95 467 0 249 324 125 28 chr17 76393565 76393756 -9044724 + L2 LINE L2 2499 2715 -599 2147 113 0 3 chr17 76393756 76394058 -9044422 + AluSx SINE Alu 1 301 -11 249 324 125 28 chr17 76394058 76394082 -9044398 + L2 LINE L2 2715 2735 -579 482 281 5 0 chr17 76394226 76394368 -9044112 - L1ME LINE L1 -353 5809 5661 621 288 40 71 chr17 76395000 76395259 -9043221 - L1ME LINE L1 -2144 5664 5421 756 158 8 0 chr17 76395259 76395379 -9043101 - FLAM_C SINE Alu -12 121 1 621 288 40 71 chr17 76395379 76395542 -9042938 - L1ME LINE L1 -2387 5421 5255 354 328 21 42 chr17 76395618 76395810 -9042670 - L1ME LINE L1 -1007 5139 4952 226 346 10 0 chr17 76395815 76395919 -9042561 - L1ME LINE L1 -1161 4985 4881 1273 183 10 30 chr17 76396002 76396302 -9042178 + MER33 DNA MER1_type 12 305 -19 2096 115 0 3 chr17 76396302 76396598 -9041882 - AluSg1 SINE Alu -14 295 1 261 313 50 65 chr17 76396728 76397233 -9041247 - L1ME LINE L1 -1446 4700 4204 271 333 0 0 chr17 76397751 76397835 -9040645 - L1MC/D LINE L1 -2214 5594 5511 2362 127 5 11 chr17 76397975 76398352 -9040128 - THE1C LTR MaLR 0 375 1 593 246 143 83 chr17 76398622 76399078 -9039402 + L2 LINE L2 2822 3304 -9 267 236 0 0 chr17 76399078 76399150 -9039330 + GA-rich Low_complexity Low_complexity 1 72 0 985 205 169 84 chr17 76399873 76400388 -9038092 - MLT1E2 LTR MaLR -4 650 14 2360 77 0 3 chr17 76400462 76400772 -9037708 - AluSc SINE Alu 0 309 1 358 161 0 238 chr17 76401010 76401148 -9037332 + Charlie1 DNA MER1_type 3 96 -427 2377 76 0 0 chr17 76401148 76401452 -9037028 - AluY SINE Alu -7 304 1 358 161 0 238 chr17 76401452 76401481 -9036999 + Charlie1 DNA MER1_type 96 130 -393 1486 146 5 0 chr17 76401646 76401866 -9036614 - MLT1A1 LTR MaLR 0 365 145 819 114 0 8 chr17 76401885 76402008 -9036472 - AluSp/q SINE Alu -15 298 177 2201 160 20 0 chr17 76402138 76402494 -9035986 + MER47A DNA MER2_type 3 365 -1 3227 124 58 35 chr17 76403260 76403348 -9035132 + MER1A DNA MER1_type 1 85 -2615 2437 58 0 0 chr17 76403348 76403659 -9034821 - AluY SINE Alu 0 311 1 3227 124 58 35 chr17 76403659 76404084 -9034396 + MER1A DNA MER1_type 85 526 -1 270 0 0 0 chr17 76404161 76404191 -9034289 + (GA)n Simple_repeat Simple_repeat 2 31 0 267 250 11 34 chr17 76406329 76406417 -9032063 + CT-rich Low_complexity Low_complexity 2 87 0 22 0 0 0 chr17 76406593 76406615 -9031865 + AT_rich Low_complexity Low_complexity 1 22 0 258 32 0 0 chr17 76408097 76408128 -9030352 + (CA)n Simple_repeat Simple_repeat 1 31 0 198 0 0 0 chr17 76408127 76408149 -9030331 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 191 215 77 77 chr17 76408735 76408800 -9029680 + MIR SINE MIR 187 251 -11 296 280 64 32 chr17 76409978 76410135 -9028345 - MLT1J LTR MaLR -6 505 344 1826 148 3 10 chr17 76410357 76410655 -9027825 - AluJb SINE Alu -16 296 1 314 217 0 14 chr17 76410673 76410742 -9027738 + MLT1A1 LTR MaLR 1 68 -297 441 274 19 0 chr17 76410743 76410849 -9027631 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 3978 120 62 58 chr17 76410840 76410895 -9027585 + Tigger3(Golem) DNA MER2_type 2277 2330 -698 2100 113 3 0 chr17 76410895 76411195 -9027285 - AluSx SINE Alu -11 301 1 3978 120 62 58 chr17 76411195 76411887 -9026593 + Tigger3(Golem) DNA MER2_type 2330 3027 -1 273 83 0 0 chr17 76411888 76411924 -9026556 + MLT1A1 LTR MaLR 68 103 -262 2123 108 3 0 chr17 76412037 76412334 -9026146 - AluSx SINE Alu -14 298 1 387 140 0 0 chr17 76413204 76413261 -9025219 + MER58A DNA MER1_type 27 83 -24 231 114 0 0 chr17 76413264 76413299 -9025181 + (A)n Simple_repeat Simple_repeat 1 35 0 775 181 111 6 chr17 76413404 76413575 -9024905 + MER5A DNA MER1_type 1 189 0 2259 102 0 0 chr17 76414293 76414598 -9023882 - AluSx SINE Alu -7 305 1 1049 204 195 30 chr17 76414662 76414995 -9023485 + MLT1C LTR MaLR 1 388 -79 995 155 21 16 chr17 76415111 76415305 -9023175 + AluJb SINE Alu 106 300 -12 914 279 37 63 chr17 76415308 76415466 -9023014 + MER57-int LTR ERV1 2090 2251 -5286 1629 169 13 20 chr17 76415466 76415767 -9022713 + AluJb SINE Alu 1 299 -13 914 279 37 63 chr17 76415767 76415968 -9022512 + MER57-int LTR ERV1 2251 2456 -5081 1976 106 13 119 chr17 76415968 76416345 -9022135 - MER1B DNA MER1_type 0 337 1 914 279 37 63 chr17 76416345 76416702 -9021778 + MER57-int LTR ERV1 2456 5761 -1776 1098 117 6 22 chr17 76416757 76416936 -9021544 + AluSg/x SINE Alu 137 312 0 180 152 0 0 chr17 76417374 76417407 -9021073 + A-rich Low_complexity Low_complexity 1 33 0 211 233 0 0 chr17 76417810 76417853 -9020627 - MIR SINE MIR -141 67 25 2299 89 0 0 chr17 76418411 76418714 -9019766 + AluSx SINE Alu 1 303 -9 633 220 142 64 chr17 76419392 76419708 -9018772 + MLT1H LTR MaLR 141 522 -27 349 332 30 40 chr17 76419739 76419941 -9018539 + MLT1K LTR MaLR 23 222 -366 821 275 5 18 chr17 76419994 76420212 -9018268 + MLT1K LTR MaLR 374 588 0 549 314 15 20 chr17 76420408 76420612 -9017868 + MLT1J LTR MaLR 1 203 -308 236 284 151 59 chr17 76422015 76422406 -9016074 + L2 LINE L2 2551 2977 -337 260 269 130 9 chr17 76422602 76422710 -9015770 + L2 LINE L2 3179 3299 -14 330 317 122 50 chr17 76423125 76423346 -9015134 + L3b LINE CR1 1336 1572 -11 804 174 0 114 chr17 76423855 76423895 -9014585 - MER5B DNA MER1_type 0 178 135 2346 117 51 14 chr17 76423895 76424246 -9014234 + THE1B LTR MaLR 1 364 0 804 174 0 114 chr17 76424246 76424406 -9014074 - MER5B DNA MER1_type -43 135 1 1089 200 23 9 chr17 76424925 76425145 -9013335 - MER58A DNA MER1_type 0 224 2 196 353 0 0 chr17 76425199 76425267 -9013213 + L2 LINE L2 3204 3271 -1 1974 127 0 0 chr17 76426186 76426489 -9011991 + AluSx SINE Alu 1 303 0 2150 82 0 4 chr17 76427606 76427886 -9010594 - AluSg SINE Alu -31 279 1 379 232 0 0 chr17 76427886 76427955 -9010525 - L3b LINE CR1 -234 1349 1281 342 250 10 19 chr17 76428558 76428662 -9009818 - MIR3 SINE MIR -38 170 68 266 351 36 18 chr17 76428675 76428786 -9009694 + MIR3 SINE MIR 47 159 -49 667 253 76 68 chr17 76428799 76428860 -9009620 + MIR SINE MIR 9 68 -194 2080 114 0 0 chr17 76428860 76429149 -9009331 + AluSx SINE Alu 1 289 -23 667 253 76 68 chr17 76429149 76429336 -9009144 + MIR SINE MIR 68 259 -3 210 71 0 0 chr17 76430080 76430108 -9008372 + (T)n Simple_repeat Simple_repeat 1 28 0 663 195 200 27 chr17 76430165 76430350 -9008130 - MER20 DNA MER1_type -2 217 1 1694 161 0 32 chr17 76430607 76430917 -9007563 - AluSp SINE Alu -13 300 1 201 173 19 39 chr17 76431152 76431204 -9007276 + T-rich Low_complexity Low_complexity 2 52 0 301 104 5 10 chr17 76431236 76431288 -9007192 + Alu SINE Alu 5 42 -259 334 90 6 17 chr17 76431934 76431994 -9006486 - Alu SINE Alu -257 42 1 287 241 80 27 chr17 76432889 76433001 -9005479 + MLT1D LTR MaLR 8 125 -380 2008 126 23 0 chr17 76433001 76433302 -9005178 + AluSx SINE Alu 1 308 -4 45 0 0 18 chr17 76433484 76433528 -9004952 + AT_rich Low_complexity Low_complexity 1 45 -10 1106 258 0 13 chr17 76433528 76433834 -9004646 + AluSx SINE Alu 1 302 0 45 0 0 18 chr17 76433834 76433845 -9004635 + AT_rich Low_complexity Low_complexity 45 55 0 1363 188 49 52 chr17 76433865 76433931 -9004549 - AluJo SINE Alu -11 291 226 1942 79 34 0 chr17 76433931 76434197 -9004283 - AluSp SINE Alu -8 305 31 1363 188 49 52 chr17 76434197 76434418 -9004062 - AluJo SINE Alu -76 226 5 876 225 17 0 chr17 76434853 76435026 -9003454 + MER45 DNA AcHobo 8 183 -1398 733 183 15 8 chr17 76435021 76435152 -9003328 + MER45 DNA AcHobo 1449 1580 -1 * 1866 163 153 44 chr17 76435259 76435521 -9002959 - MLT1D LTR MaLR -7 498 266 1651 166 7 13 chr17 76435521 76435829 -9002651 - AluSx SINE Alu -6 306 1 1866 163 153 44 chr17 76435829 76435996 -9002484 - MLT1D LTR MaLR -239 266 22 550 158 133 0 chr17 76436070 76436190 -9002290 - MER69 DNA AcHobo -3 2523 2388 281 333 33 8 chr17 76436542 76436662 -9001818 + L2 LINE L2 3150 3272 0 2388 78 0 3 chr17 76436978 76437286 -9001194 + AluSx SINE Alu 3 309 -3 2198 91 3 0 chr17 76437347 76437643 -9000837 + AluY SINE Alu 1 297 -14 7432 44 6 0 chr17 76437643 76439078 -8999402 + L1PA5 LINE L1 4714 6153 -1 1995 136 0 0 chr17 76439300 76439594 -8998886 + AluSx SINE Alu 1 294 -18 1009 266 174 20 chr17 76439613 76440101 -8998379 - L2 LINE L2 0 3313 2682 2071 134 0 0 chr17 76440101 76440407 -8998073 - AluSx SINE Alu -6 306 1 1009 266 174 20 chr17 76440407 76440585 -8997895 - L2 LINE L2 -631 2682 2533 273 327 20 0 chr17 76440849 76440950 -8997530 + L2 LINE L2 3210 3312 -1 822 96 0 0 chr17 76441120 76441224 -8997256 - LTR8 LTR ERV1 -3 688 585 3544 119 11 49 chr17 76441414 76441468 -8997012 - LTR8 LTR ERV1 -112 579 524 1947 102 67 0 chr17 76441468 76441752 -8996728 - AluSx SINE Alu -9 303 1 3544 119 11 49 chr17 76441752 76442041 -8996439 - LTR8 LTR ERV1 -167 524 264 2169 136 7 0 chr17 76442041 76442350 -8996130 - AluSx SINE Alu -1 311 1 3544 119 11 49 chr17 76442350 76442576 -8995904 - LTR8 LTR ERV1 -427 264 31 457 107 0 0 chr17 76442596 76442671 -8995809 - Alu SINE Alu 0 309 235 486 88 0 0 chr17 76442674 76442742 -8995738 - Alu SINE Alu -7 305 238 2211 121 0 0 chr17 76442745 76443043 -8995437 - AluSx SINE Alu -14 298 1 294 95 0 0 chr17 76443189 76443231 -8995249 + (GA)n Simple_repeat Simple_repeat 1 42 0 2286 121 0 0 chr17 76443671 76443976 -8994504 - AluSq SINE Alu -8 305 1 492 250 181 20 chr17 76444238 76444442 -8994038 + MIR SINE MIR 20 256 -6 332 362 97 26 chr17 76444861 76445201 -8993279 - L2 LINE L2 -405 2909 2546 460 180 28 133 chr17 76445240 76445268 -8993212 - L1MC5 LINE L1 -32 7929 7900 2189 115 0 16 chr17 76445268 76445572 -8992908 + AluSx SINE Alu 1 299 -13 460 180 28 133 chr17 76445572 76445651 -8992829 - L1MC5 LINE L1 -61 7900 7852 1604 156 41 37 chr17 76445651 76445946 -8992534 - AluJo SINE Alu -16 296 1 460 180 28 133 chr17 76445946 76446048 -8992432 - L1MC5 LINE L1 -109 7852 7741 626 252 13 0 chr17 76446384 76446535 -8991945 - MER53 DNA DNA -2 187 35 2530 64 0 0 chr17 76446535 76446832 -8991648 - AluY SINE Alu -14 297 1 583 234 24 36 chr17 76446832 76446852 -8991628 + MER53 DNA DNA 162 181 -8 452 194 90 52 chr17 76446948 76447015 -8991465 + MER5A DNA MER1_type 1 64 -125 1893 131 3 61 chr17 76447015 76447343 -8991137 + AluSx SINE Alu 1 309 -3 452 194 90 52 chr17 76447343 76447430 -8991050 + MER5A DNA MER1_type 64 161 -28 358 132 104 0 chr17 76448341 76448424 -8990056 - MER5A DNA MER1_type -91 98 5 2326 88 0 49 chr17 76449034 76449362 -8989118 - AluSx SINE Alu 0 312 1 436 305 152 0 chr17 76449385 76449536 -8988944 - MER5A DNA MER1_type -3 186 13 2242 106 36 0 chr17 76452184 76452485 -8985995 - AluSx SINE Alu 0 312 1 486 191 26 17 chr17 76453305 76453420 -8985060 + L1MB3 LINE L1 5922 6037 -146 1474 123 0 14 chr17 76453422 76453634 -8984846 - AluSg/x SINE Alu 0 310 102 2006 171 0 0 chr17 76453660 76453970 -8984510 - AluSx SINE Alu -2 310 1 801 175 0 0 chr17 76454010 76454153 -8984327 - L1MB3 LINE L1 -295 5888 5746 1180 240 72 81 chr17 76454251 76454834 -8983646 - L1ME3A LINE L1 -51 6119 5542 2032 161 13 0 chr17 76454845 76455144 -8983336 - AluSq SINE Alu -10 303 1 1040 91 8 0 chr17 76455150 76455282 -8983198 - AluSq/x SINE Alu -180 133 1 193 140 20 100 chr17 76455950 76456000 -8982480 + L2 LINE L2 3251 3296 -17 2075 153 3 3 chr17 76456044 76456351 -8982129 - AluJb SINE Alu -4 308 2 1030 240 100 54 chr17 76456351 76456979 -8981501 - L1MC5 LINE L1 -42 7919 7263 577 237 35 29 chr17 76457170 76457343 -8981137 + Charlie2 DNA MER1_type 49 222 -2640 690 215 66 129 chr17 76457428 76457472 -8981008 + Charlie2 DNA MER1_type 1858 1903 -959 2230 114 0 16 chr17 76457472 76457779 -8980701 - AluSx SINE Alu -10 302 1 690 215 66 129 chr17 76457779 76458129 -8980351 + Charlie2 DNA MER1_type 1903 2227 -635 261 0 0 0 chr17 76459126 76459155 -8979325 + (TCCA)n Simple_repeat Simple_repeat 3 31 0 317 339 174 17 chr17 76459324 76459560 -8978920 - L1MC4a LINE L1 -340 5781 5628 240 35 0 0 chr17 76459637 76459666 -8978814 + (TG)n Simple_repeat Simple_repeat 2 30 0 3299 104 29 12 chr17 76459920 76460399 -8978081 - LTR45B LTR ERV1 0 489 3 2081 69 0 55 chr17 76462026 76462336 -8976144 + AluSx SINE Alu 24 318 0 2262 113 8 53 chr17 76462751 76462940 -8975540 - MLT1B LTR MaLR -7 383 220 1827 126 0 4 chr17 76462940 76463195 -8975285 - AluJb SINE Alu -22 290 37 2262 113 8 53 chr17 76463195 76463403 -8975077 - MLT1B LTR MaLR -170 220 4 2390 97 0 0 chr17 76463645 76463943 -8974537 + AluSq SINE Alu 1 298 -15 182 282 0 0 chr17 76464105 76464144 -8974336 - L2 LINE L2 -1871 1443 1405 1182 114 68 55 chr17 76464168 76464387 -8974093 + MER46A DNA MER2_type 5 226 -10 1109 178 120 92 chr17 76464411 76464747 -8973733 - MLT1C LTR MaLR -48 419 69 2267 105 10 0 chr17 76464747 76465042 -8973438 - AluSx SINE Alu -14 298 1 1109 178 120 92 chr17 76465042 76465105 -8973375 - MLT1C LTR MaLR -398 69 9 2137 89 0 51 chr17 76466735 76467050 -8971430 - AluSx SINE Alu -1 311 13 2154 150 0 26 chr17 76467198 76467544 -8970936 + MER1B DNA MER1_type 1 337 0 306 50 0 0 chr17 76467779 76467819 -8970661 + (T)n Simple_repeat Simple_repeat 1 40 0 1699 176 0 4 chr17 76468000 76468273 -8970207 - AluSx SINE Alu -6 306 35 449 206 10 0 chr17 76468382 76468479 -8970001 - L1M4 LINE L1 -2044 4102 4005 403 292 6 4 chr17 76468535 76468721 -8969759 + MIR SINE MIR 1 262 0 1456 54 11 0 chr17 76468938 76469172 -8969308 + L1PA7 LINE L1 5950 6185 0 401 239 11 0 chr17 76469267 76469359 -8969121 + MIR SINE MIR 167 259 -3 448 301 7 22 chr17 76469683 76469819 -8968661 + L3 LINE CR1 1432 1565 -12 296 261 73 42 chr17 76472086 76472251 -8966229 - MER20 DNA MER1_type -22 197 28 258 391 75 0 chr17 76472265 76472439 -8966041 + MER91A DNA MER1_type 10 196 0 303 220 0 0 chr17 76472547 76472606 -8965874 + L2 LINE L2 3213 3271 -1 317 23 0 23 chr17 76473614 76473657 -8964823 + (TG)n Simple_repeat Simple_repeat 2 43 0 1949 140 0 44 chr17 76474103 76474418 -8964062 + AluSx SINE Alu 1 301 -11 227 280 21 32 chr17 76474711 76474804 -8963676 + MARNA DNA Mariner 20 111 -475 383 336 36 33 chr17 76475512 76475786 -8962694 - MLT1I LTR MaLR -35 374 100 254 222 97 0 chr17 76475952 76476024 -8962456 - MER2 DNA MER2_type -266 79 1 2455 87 0 0 chr17 76476442 76476742 -8961738 - AluSg SINE Alu -10 300 1 1757 183 3 7 chr17 76477302 76477602 -8960878 - AluJb SINE Alu -13 299 1 759 90 63 0 chr17 76478475 76478586 -8959894 - AluSg/x SINE Alu -2 310 193 849 195 23 0 chr17 76478686 76478860 -8959620 - MLT1D LTR MaLR -301 204 27 2018 143 13 0 chr17 76478891 76479198 -8959282 + AluSx SINE Alu 1 311 -1 2092 132 17 0 chr17 76479809 76480104 -8958376 + AluSx SINE Alu 1 300 -12 610 140 159 0 chr17 76480741 76480848 -8957632 - FLAM_A SINE Alu -5 128 5 411 293 57 52 chr17 76480998 76481040 -8957440 + MIR SINE MIR 44 84 -178 2184 133 27 12 chr17 76481040 76481372 -8957108 + MER1B DNA MER1_type 1 337 0 411 293 57 52 chr17 76481372 76481541 -8956939 + MIR SINE MIR 84 256 -6 648 302 40 22 chr17 76481586 76481811 -8956669 + L3 LINE CR1 1236 1464 -113 2188 126 7 7 chr17 76481824 76482126 -8956354 + AluSx SINE Alu 1 302 -10 1190 134 27 54 chr17 76482127 76482351 -8956129 - MER20 DNA MER1_type -1 218 1 2085 141 6 35 chr17 76484054 76484401 -8954079 + MER1B DNA MER1_type 1 337 0 2238 122 0 0 chr17 76484449 76484744 -8953736 + AluSx SINE Alu 1 295 -17 2242 117 0 0 chr17 76485196 76485495 -8952985 - AluSx SINE Alu -13 299 1 1816 161 3 32 chr17 76487190 76487500 -8950980 - AluJo SINE Alu -11 301 1 633 106 32 8 chr17 76487754 76487784 -8950696 + CT-rich Low_complexity Low_complexity 5 33 -97 2001 125 36 13 chr17 76487784 76488089 -8950391 - AluSq SINE Alu -1 312 1 633 106 32 8 chr17 76488089 76488181 -8950299 + CT-rich Low_complexity Low_complexity 33 130 0 1949 147 10 16 chr17 76488184 76488498 -8949982 - AluSx SINE Alu 0 312 1 1997 129 0 58 chr17 76489315 76489625 -8948855 + AluSx SINE Alu 1 292 -20 1441 172 0 61 chr17 76490244 76490540 -8947940 - MLT1B LTR MaLR 0 390 113 2148 119 6 13 chr17 76490542 76490854 -8947626 + AluSg SINE Alu 1 310 0 450 218 0 0 chr17 76490885 76490963 -8947517 - AluJ/FLAM SINE Alu -233 79 2 521 149 11 32 chr17 76490995 76491089 -8947391 - MLT1B LTR MaLR -298 92 1 2308 116 0 0 chr17 76491707 76492018 -8946462 - AluSq SINE Alu -2 311 1 1977 130 45 7 chr17 76492704 76492996 -8945484 + AluSg SINE Alu 1 303 -7 215 238 0 0 chr17 76493055 76493097 -8945383 + L2 LINE L2 3171 3212 -60 1532 103 0 0 chr17 76493350 76493553 -8944927 + AluSg SINE Alu 1 203 -107 247 291 256 0 chr17 76493725 76493842 -8944638 + L2 LINE L2 3164 3310 -3 1807 148 28 3 chr17 76495269 76495560 -8942920 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 76497030 76497055 -8941425 + AT_rich Low_complexity Low_complexity 1 25 0 2311 96 56 17 chr17 76497102 76497457 -8941023 - L1PB1 LINE L1 0 6151 5783 355 310 0 0 chr17 76497458 76497545 -8940935 - L1MC4 LINE L1 -1342 6700 6614 * 384 289 0 0 chr17 76497505 76497595 -8940885 + L1MC4 LINE L1 6614 6703 -1339 6525 160 12 12 chr17 76497604 76498236 -8940244 - L1P5 LINE L1 -360 5791 5160 306 0 0 0 chr17 76498236 76498270 -8940210 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1853 151 0 0 chr17 76498272 76498563 -8939917 - AluSx SINE Alu -21 291 1 6525 160 12 12 chr17 76498563 76499772 -8938708 - L1P5 LINE L1 -992 5159 3948 554 210 21 43 chr17 76499775 76499829 -8938651 + Charlie2 DNA MER1_type 2427 2481 -381 1913 133 10 13 chr17 76499829 76500130 -8938350 + AluSx SINE Alu 1 300 -12 554 210 21 43 chr17 76500130 76500261 -8938219 + Charlie2 DNA MER1_type 2481 2608 -254 394 183 0 43 chr17 76500330 76500423 -8938057 + Charlie2 DNA MER1_type 2598 2686 -176 2080 100 6 34 chr17 76500428 76500748 -8937732 + AluSx SINE Alu 1 311 -1 324 127 0 0 chr17 76500783 76500838 -8937642 + (CCTA)n Simple_repeat Simple_repeat 1 55 0 502 179 28 9 chr17 76500858 76500964 -8937516 + Charlie2 DNA MER1_type 2711 2818 -44 2166 103 0 0 chr17 76500965 76501265 -8937215 - AluY SINE Alu -7 304 5 1863 101 0 4 chr17 76501486 76501744 -8936736 - AluSx SINE Alu -53 259 3 1846 142 23 7 chr17 76502153 76502456 -8936024 + AluSx SINE Alu 1 308 -4 314 227 184 76 chr17 76502648 76502833 -8935647 + MIR3 SINE MIR 3 207 -1 1913 117 0 54 chr17 76502947 76503263 -8935217 + AluSx SINE Alu 1 299 -13 1622 156 4 149 chr17 76503390 76503580 -8934900 + MLT1B LTR MaLR 1 217 -173 2262 82 0 3 chr17 76503580 76503885 -8934595 + AluY SINE Alu 1 304 -7 1622 156 4 149 chr17 76503885 76503974 -8934506 + MLT1B LTR MaLR 217 192 -198 1573 142 64 37 chr17 76503974 76504269 -8934211 + AluJo SINE Alu 1 303 -9 1622 156 4 149 chr17 76504269 76504444 -8934036 + MLT1B LTR MaLR 191 390 0 306 206 96 0 chr17 76504474 76504547 -8933933 - MIR3 SINE MIR -16 192 113 2479 44 0 0 chr17 76504719 76505017 -8933463 + AluY SINE Alu 1 298 -13 470 283 155 30 chr17 76505435 76505796 -8932684 + L1ME4a LINE L1 5715 6120 -1 2304 122 114 3 chr17 76506719 76506812 -8931668 + MSTC LTR MaLR 1 82 -346 1859 159 3 0 chr17 76506812 76507108 -8931372 + AluJb SINE Alu 1 297 -15 2304 122 114 3 chr17 76507108 76507399 -8931081 + MSTC LTR MaLR 82 428 0 1429 142 119 78 chr17 76507819 76508179 -8930301 + THE1C LTR MaLR 1 375 0 1753 172 0 3 chr17 76508717 76509013 -8929467 + AluSx SINE Alu 1 295 -17 2111 116 3 3 chr17 76509438 76509739 -8928741 + AluSx SINE Alu 1 301 -11 606 214 18 0 chr17 76510017 76510129 -8928351 + MER81 DNA DNA 1 114 0 1062 186 0 0 chr17 76510231 76510419 -8928061 + AluJb SINE Alu 121 308 -4 1957 155 0 0 chr17 76510432 76510728 -8927752 + AluSx SINE Alu 1 296 -16 1160 161 23 18 chr17 76511086 76511304 -8927176 - MER20 DNA MER1_type 0 219 1 1957 130 3 0 chr17 76511410 76511709 -8926771 + AluJb SINE Alu 6 305 -7 198 0 0 0 chr17 76511977 76511999 -8926481 + (A)n Simple_repeat Simple_repeat 1 22 0 258 277 44 102 chr17 76512247 76512384 -8926096 + HsTC2 DNA Tc2 7 135 -1763 323 314 107 6 chr17 76512401 76512570 -8925910 + HsTC2 DNA Tc2 1274 1459 -439 609 182 0 33 chr17 76512578 76512699 -8925781 + MER5A DNA MER1_type 2 118 -71 1929 143 3 0 chr17 76512699 76513007 -8925473 + AluSx SINE Alu 1 309 -3 180 277 34 50 chr17 76513007 76513018 -8925462 - MER5A DNA MER1_type -107 82 72 465 154 0 0 chr17 76513018 76513109 -8925371 + GA-rich Low_complexity Low_complexity 2 92 0 1015 92 5 33 chr17 76513110 76513294 -8925186 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 279 253 76 0 chr17 76513297 76513376 -8925104 + MER5A DNA MER1_type 105 189 0 690 228 53 106 chr17 76513436 76513722 -8924758 + HsTC2 DNA Tc2 1485 1742 -156 1879 140 31 0 chr17 76513722 76514014 -8924466 - AluSx SINE Alu -11 301 1 690 228 53 106 chr17 76514014 76514161 -8924319 + HsTC2 DNA Tc2 1742 1895 -3 224 360 188 13 chr17 76514161 76514400 -8924080 - L3b LINE CR1 -186 1397 1117 1861 123 7 19 chr17 76514601 76514909 -8923571 - AluSx SINE Alu -4 308 5 353 259 76 46 chr17 76515501 76515632 -8922848 + L2 LINE L2 3165 3299 -14 1780 148 7 0 chr17 76515750 76516081 -8922399 - AluJb SINE Alu 0 333 1 225 293 177 22 chr17 76516382 76516614 -8921866 - L3 LINE CR1 -235 1342 1075 312 175 0 0 chr17 76516781 76516844 -8921636 + CT-rich Low_complexity Low_complexity 4 66 0 1716 153 3 30 chr17 76516874 76517169 -8921311 + AluJo SINE Alu 1 287 -25 207 0 0 0 chr17 76517172 76517195 -8921285 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 228 256 11 67 chr17 76517230 76517320 -8921160 - L1ME4a LINE L1 -102 6019 5935 180 231 0 0 chr17 76517320 76517372 -8921108 + (CATA)n Simple_repeat Simple_repeat 3 54 0 527 321 26 60 chr17 76517532 76517748 -8920732 - L1MC4a LINE L1 -1899 5909 5687 2360 95 0 0 chr17 76517748 76518054 -8920426 - AluSx SINE Alu -6 306 1 816 156 0 15 chr17 76518058 76518193 -8920287 - FLAM_C SINE Alu 0 133 1 527 321 26 60 chr17 76518193 76518389 -8920091 - L1MC4a LINE L1 -2124 5684 5506 217 193 277 12 chr17 76518564 76518647 -8919833 + MIR SINE MIR 115 219 -43 2377 71 0 13 chr17 76518698 76519009 -8919471 - AluY SINE Alu -4 307 1 2196 79 45 0 chr17 76520446 76520737 -8917743 - AluY SINE Alu -7 304 1 2209 107 0 0 chr17 76520972 76521272 -8917208 + AluSx SINE Alu 1 300 -12 2751 154 9 43 chr17 76521595 76521921 -8916559 + L1MB5 LINE L1 5649 5951 -223 2136 115 7 0 chr17 76521921 76522226 -8916254 + AluSx SINE Alu 1 307 -5 2751 154 9 43 chr17 76522226 76522437 -8916043 + L1MB5 LINE L1 5951 6168 -6 856 142 0 8 chr17 76522442 76522576 -8915904 - FLAM_C SINE Alu 0 133 1 26 0 0 0 chr17 76522581 76522607 -8915873 + AT_rich Low_complexity Low_complexity 1 26 0 571 163 11 0 chr17 76522607 76522699 -8915781 - FRAM SINE Alu -21 155 63 443 204 167 0 chr17 76522921 76523053 -8915427 + L2 LINE L2 3160 3313 0 3244 179 28 7 chr17 76523120 76523736 -8914744 + L1MB2 LINE L1 5536 6164 -7 472 62 15 0 chr17 76524221 76524286 -8914194 - MER41A LTR ERV1 -89 465 400 861 199 34 85 chr17 76524345 76524416 -8914064 + MER58A DNA MER1_type 1 74 -2346 2235 91 0 0 chr17 76524416 76524713 -8913767 + AluSx SINE Alu 1 297 -15 861 199 34 85 chr17 76524713 76524877 -8913603 + MER58A DNA MER1_type 74 224 0 225 125 0 0 chr17 76525709 76525727 -8912753 + (GA)n Simple_repeat Simple_repeat 2 19 -22 1937 147 0 3 chr17 76525727 76526033 -8912447 + AluJo SINE Alu 1 305 -7 225 125 0 0 chr17 76526033 76526054 -8912426 + (GA)n Simple_repeat Simple_repeat 18 41 0 202 258 0 65 chr17 76526524 76526586 -8911894 + L2 LINE L2 3244 3301 -12 328 169 45 45 chr17 76526649 76526738 -8911742 + MER53 DNA DNA 1 89 -100 318 287 30 10 chr17 76526792 76526893 -8911587 - MIR SINE MIR -129 133 31 850 246 105 33 chr17 76527083 76527519 -8910961 + MLT1J LTR MaLR 8 511 0 2127 104 16 0 chr17 76528219 76528527 -8909953 + AluSq SINE Alu 1 313 0 778 304 54 54 chr17 76528594 76528913 -8909567 - LTR67 LTR ERVL -3 554 232 1902 121 11 0 chr17 76528913 76529225 -8909255 - AluSx SINE Alu 0 315 1 778 304 54 54 chr17 76529225 76529457 -8909023 - LTR67 LTR ERVL -324 233 2 2199 114 0 0 chr17 76529619 76529925 -8908555 - AluSx SINE Alu -5 307 2 511 154 0 0 chr17 76530410 76530488 -8907992 + AluS SINE Alu 5 82 -230 1385 144 0 0 chr17 76530709 76530924 -8907556 + AluSg/x SINE Alu 96 310 -2 489 321 54 0 chr17 76530943 76531111 -8907369 + MIR SINE MIR 86 262 0 2001 112 4 0 chr17 76531785 76532062 -8906418 + AluSx SINE Alu 1 278 -34 894 155 0 67 chr17 76532581 76532619 -8905861 + L1MA9 LINE L1 6132 6171 -141 2252 111 0 0 chr17 76532619 76532926 -8905554 + AluSx SINE Alu 1 307 -5 894 155 0 67 chr17 76532926 76533081 -8905399 + L1MA9 LINE L1 6171 6312 0 2303 66 0 10 chr17 76533922 76534226 -8904254 - AluY SINE Alu -10 301 1 2102 113 10 0 chr17 76534757 76535057 -8903423 - AluSx SINE Alu -9 303 1 27 62 0 0 chr17 76535094 76535142 -8903338 + AT_rich Low_complexity Low_complexity 1 48 0 1444 106 10 0 chr17 76535265 76535472 -8903008 + AluSg/x SINE Alu 92 300 -12 1060 200 77 39 chr17 76535509 76535794 -8902686 + MLT1C LTR MaLR 146 441 -26 261 0 0 0 chr17 76535808 76535837 -8902643 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 210 369 0 0 chr17 76535882 76535947 -8902533 + A-rich Low_complexity Low_complexity 1 65 0 37 23 0 0 chr17 76535947 76535991 -8902489 + AT_rich Low_complexity Low_complexity 1 44 0 30 77 0 0 chr17 76536238 76536303 -8902177 + AT_rich Low_complexity Low_complexity 1 65 0 246 150 0 0 chr17 76536403 76536443 -8902037 + Alu SINE Alu 255 294 -5 1920 226 87 70 chr17 76536448 76536686 -8901794 - HAL1 LINE L1 -72 2435 2203 1520 107 190 43 chr17 76536686 76537013 -8901467 - THE1C LTR MaLR 0 375 1 1920 226 87 70 chr17 76537013 76537183 -8901297 - HAL1 LINE L1 -304 2203 2037 2052 126 0 0 chr17 76537183 76537476 -8901004 - AluSx SINE Alu -19 293 1 1920 226 87 70 chr17 76537476 76537811 -8900669 - HAL1 LINE L1 -470 2037 1678 1226 210 69 150 chr17 76537812 76538237 -8900243 + MLT1F LTR MaLR 1 368 -174 2479 97 33 28 chr17 76538237 76538599 -8899881 + THE1B LTR MaLR 1 364 0 1226 210 69 150 chr17 76538599 76538753 -8899727 + MLT1F LTR MaLR 368 533 -9 1292 269 110 28 chr17 76538759 76538953 -8899527 - HAL1 LINE L1 -837 1670 1493 2385 52 0 0 chr17 76538953 76539244 -8899236 - AluY SINE Alu -20 291 1 1292 269 110 28 chr17 76539244 76539587 -8898893 - HAL1 LINE L1 -1014 1493 1089 1789 107 0 0 chr17 76539597 76539840 -8898640 - AluSx SINE Alu -12 300 58 1564 180 31 3 chr17 76540159 76540453 -8898027 - AluJb SINE Alu -10 302 1 1536 122 35 20 chr17 76540575 76540829 -8897651 + AluSg SINE Alu 42 299 -11 300 27 0 0 chr17 76540832 76540869 -8897611 + (CA)n Simple_repeat Simple_repeat 2 38 0 856 173 0 9 chr17 76540875 76541110 -8897370 + GA-rich Low_complexity Low_complexity 1 232 0 183 80 0 0 chr17 76541325 76541350 -8897130 + (GA)n Simple_repeat Simple_repeat 1 25 0 300 341 87 8 chr17 76541417 76541669 -8896811 - L2 LINE L2 -1357 1957 1686 219 220 0 0 chr17 76541689 76541739 -8896741 + (CA)n Simple_repeat Simple_repeat 2 51 0 212 373 69 0 chr17 76541912 76542014 -8896466 - L2 LINE L2 -3 3269 3161 852 179 0 6 chr17 76542253 76542409 -8896071 - MER89 LTR ERV1 -64 495 341 1488 192 39 90 chr17 76542590 76542683 -8895797 + MLT1C LTR MaLR 1 97 -370 2108 119 23 16 chr17 76542683 76542993 -8895487 + AluSx SINE Alu 1 312 0 1488 192 39 90 chr17 76542993 76543033 -8895447 + MLT1C LTR MaLR 97 137 -330 2228 197 100 21 chr17 76543033 76543551 -8894929 - MER89 LTR ERV1 0 559 1 1488 192 39 90 chr17 76543551 76543849 -8894631 + MLT1C LTR MaLR 137 411 -56 2665 101 0 3 chr17 76544648 76545013 -8893467 + THE1B LTR MaLR 1 364 0 363 305 47 0 chr17 76545500 76545628 -8892852 - MIR SINE MIR -69 193 60 1430 175 68 71 chr17 76546056 76546422 -8892058 - MLT1A1 LTR MaLR 0 365 1 2458 75 0 0 chr17 76546510 76546802 -8891678 - AluY SINE Alu -19 292 1 206 254 63 79 chr17 76548497 76548623 -8889857 + MIR SINE MIR 1 124 -138 567 259 16 62 chr17 76551435 76551581 -8886899 + MER5A DNA MER1_type 6 142 -47 1992 129 27 3 chr17 76551581 76551876 -8886604 + AluSc SINE Alu 1 302 -7 567 259 16 62 chr17 76551876 76551922 -8886558 + MER5A DNA MER1_type 142 189 0 361 206 15 0 chr17 76552390 76552458 -8886022 - Tigger2 DNA MER2_type -10 2708 2640 1139 107 0 0 chr17 76552458 76552608 -8885872 - AluJb SINE Alu -7 305 156 459 116 0 0 chr17 76553886 76553955 -8884525 - AluS SINE Alu -242 70 2 344 185 31 0 chr17 76553956 76554021 -8884459 + MLT1A2 LTR MaLR 308 374 0 2462 74 0 10 chr17 76554137 76554446 -8884034 + AluY SINE Alu 1 306 -5 1863 85 0 0 chr17 76556962 76557186 -8881294 - AluSq SINE Alu -89 224 1 1935 136 7 0 chr17 76557355 76557635 -8880845 + AluSx SINE Alu 24 305 -7 268 91 0 23 chr17 76557974 76558018 -8880462 - MLT1D LTR MaLR 0 505 463 1399 184 14 31 chr17 76558018 76558306 -8880174 + AluSx SINE Alu 1 283 -29 290 98 229 0 chr17 76558372 76558433 -8880047 + Alu SINE Alu 4 78 -223 566 232 0 0 chr17 76558559 76558697 -8879783 + AluSp/q SINE Alu 162 299 -14 2115 95 7 0 chr17 76558710 76558983 -8879497 + AluY SINE Alu 17 291 -20 695 199 152 13 chr17 76561019 76561250 -8877230 - MER33 DNA MER1_type -4 320 58 2189 104 7 7 chr17 76561252 76561561 -8876919 - AluSq SINE Alu -4 309 1 1052 136 60 0 chr17 76561584 76561768 -8876712 - L1PB4 LINE L1 -2 6154 5960 646 197 8 0 chr17 76562726 76562843 -8875637 + FLAM_C SINE Alu 5 122 -21 209 377 74 0 chr17 76563463 76563585 -8874895 - MIR SINE MIR -57 205 75 1884 126 19 35 chr17 76564530 76564847 -8873633 + AluSx SINE Alu 1 312 0 2599 59 3 0 chr17 76564997 76565301 -8873179 + AluY SINE Alu 1 305 -6 272 174 0 29 chr17 76565393 76565462 -8873018 - MADE1 DNA Mariner -1 79 13 361 39 20 0 chr17 76565594 76565645 -8872835 - AluY SINE Alu -250 52 1 2396 70 3 0 chr17 76565656 76565963 -8872517 - AluSp SINE Alu 0 308 1 2473 60 0 7 chr17 76565965 76566264 -8872216 - AluY SINE Alu -14 297 1 1019 194 40 8 chr17 76566293 76566549 -8871931 + AluJb SINE Alu 1 301 -11 445 277 0 9 chr17 76566549 76566661 -8871819 - MER3 DNA MER1_type -80 129 19 1192 91 0 0 chr17 76566891 76567034 -8871446 + AluSq/x SINE Alu 1 143 -169 1923 118 75 0 chr17 76567035 76567314 -8871166 + AluSx SINE Alu 1 300 -12 2209 120 0 0 chr17 76567435 76567734 -8870746 - AluSx SINE Alu -13 299 1 233 213 0 0 chr17 76567855 76567902 -8870578 - MIR3 SINE MIR -11 197 151 184 239 65 0 chr17 76568854 76568900 -8869580 + MIR SINE MIR 105 153 -55 2285 117 0 22 chr17 76568945 76569261 -8869219 - AluSx SINE Alu -3 309 1 2289 104 3 3 chr17 76569539 76569836 -8868644 + AluSg SINE Alu 3 299 -11 2390 57 10 24 chr17 76570260 76570558 -8867922 - AluY SINE Alu -17 294 1 1020 152 12 12 chr17 76570573 76570737 -8867743 + AluJb SINE Alu 132 295 -17 328 364 18 6 chr17 76570746 76570911 -8867569 + MIR SINE MIR 84 250 -12 2204 130 0 0 chr17 76571741 76572060 -8866420 + AluSx SINE Alu 1 312 0 1142 75 118 0 chr17 76572251 76572412 -8866068 + AluSp SINE Alu 119 298 -15 2425 107 0 0 chr17 76572523 76572832 -8865648 + AluSx SINE Alu 1 309 -3 193 240 70 90 chr17 76573034 76573134 -8865346 - MIR SINE MIR -62 146 49 370 330 188 21 chr17 76573721 76573832 -8864648 - L2 LINE L2 -108 3205 3114 2366 98 0 0 chr17 76573832 76574128 -8864352 - AluSc SINE Alu -13 296 1 2289 111 10 0 chr17 76574132 76574465 -8864015 - AluSx SINE Alu 0 336 1 370 330 188 21 chr17 76574465 76574495 -8863985 - L2 LINE L2 -201 3112 3088 1809 159 13 22 chr17 76574495 76574810 -8863670 + AluJb SINE Alu 1 312 0 370 330 188 21 chr17 76574810 76575272 -8863208 - L2 LINE L2 -225 3088 2498 2042 122 4 0 chr17 76575274 76575545 -8862935 + AluSx SINE Alu 1 272 -40 898 127 0 0 chr17 76575647 76575765 -8862715 - AluSq/x SINE Alu -194 119 2 333 179 0 15 chr17 76575765 76575832 -8862648 + MLT1A1 LTR MaLR 297 362 -3 819 194 40 50 chr17 76575992 76576148 -8862332 - MER20 DNA MER1_type -1 218 63 1976 112 3 40 chr17 76576148 76576451 -8862029 + AluJb SINE Alu 1 292 -20 819 194 40 50 chr17 76576451 76576495 -8861985 - MER20 DNA MER1_type -156 63 20 245 62 0 203 chr17 76576529 76576552 -8861928 - MADE1 DNA Mariner -2 78 74 2086 109 63 0 chr17 76576552 76576836 -8861644 + AluSx SINE Alu 1 302 -10 245 62 0 203 chr17 76576836 76576876 -8861604 - MADE1 DNA Mariner -6 74 28 2313 95 17 0 chr17 76576914 76577210 -8861270 + AluSg SINE Alu 1 301 -9 243 0 0 0 chr17 76577242 76577269 -8861211 + (A)n Simple_repeat Simple_repeat 1 27 0 364 303 0 10 chr17 76577652 76577751 -8860729 - L2 LINE L2 0 3272 3175 288 216 40 0 chr17 76577756 76577830 -8860650 + ORSL DNA AcHobo 32 108 -167 2361 94 3 0 chr17 76577851 76578158 -8860322 - AluSg SINE Alu -2 308 1 461 150 12 0 chr17 76578159 76578239 -8860241 + ORSL DNA AcHobo 171 251 -24 1760 146 60 0 chr17 76578446 76578713 -8859767 + AluJo SINE Alu 1 283 -29 199 317 200 7 chr17 76578814 76578959 -8859521 - L2 LINE L2 -844 2470 2298 1335 208 35 31 chr17 76578974 76579292 -8859188 + MLT1A2 LTR MaLR 1 319 -55 1247 114 29 0 chr17 76579293 76579468 -8859012 - AluSg/x SINE Alu -5 305 126 1955 153 3 7 chr17 76580589 76580897 -8857583 - AluJb SINE Alu -5 307 1 2145 128 3 13 chr17 76580902 76581208 -8857272 - AluSx SINE Alu -9 303 1 2085 108 76 0 chr17 76581918 76582206 -8856274 + AluSx SINE Alu 1 310 -2 2558 71 3 3 chr17 76582211 76582522 -8855958 + AluY SINE Alu 1 311 0 1842 136 7 42 chr17 76583442 76583750 -8854730 - AluJo SINE Alu -15 297 1 421 326 38 21 chr17 76585316 76585531 -8852949 + MIR SINE MIR 10 234 -28 800 187 0 32 chr17 76585536 76585691 -8852789 + FRAM SINE Alu 27 176 0 210 279 0 15 chr17 76585700 76585768 -8852712 + MIR SINE MIR 193 259 -3 617 176 19 0 chr17 76586011 76586119 -8852361 - MLT1B LTR MaLR -280 110 1 906 148 8 0 chr17 76586144 76586272 -8852208 + AluSq/x SINE Alu 1 129 -184 232 230 0 100 chr17 76586275 76586375 -8852105 - L1MC4 LINE L1 -1339 6703 6614 304 261 14 0 chr17 76586377 76586446 -8852034 + L1MCa LINE L1 1995 2064 -4362 * 404 253 0 22 chr17 76586428 76586519 -8851961 - L1MC4 LINE L1 -1340 6702 6614 226 238 48 0 chr17 76586519 76586603 -8851877 - L1MC4 LINE L1 -1341 6701 6614 1096 123 86 0 chr17 76586629 76586792 -8851688 + AluSc SINE Alu 119 295 -14 475 255 23 93 chr17 76587860 76587963 -8850517 - MIR SINE MIR -11 251 169 2016 150 3 13 chr17 76587963 76588276 -8850204 + AluSx SINE Alu 1 310 -2 475 255 23 93 chr17 76588276 76588388 -8850092 - MIR SINE MIR -93 169 51 1738 171 14 10 chr17 76588426 76588718 -8849762 + AluJo SINE Alu 1 293 -19 198 136 0 0 chr17 76588718 76588762 -8849718 + (GA)n Simple_repeat Simple_repeat 1 44 0 1301 121 0 11 chr17 76588919 76589101 -8849379 - AluSp SINE Alu 0 313 134 2046 121 50 0 chr17 76589101 76589381 -8849099 - AluSx SINE Alu -18 294 1 1634 245 23 64 chr17 76589387 76590040 -8848440 - L1MC5 LINE L1 -37 7924 7299 2386 73 0 23 chr17 76590060 76590361 -8848119 + AluY SINE Alu 5 298 -13 1185 165 0 0 chr17 76590361 76590537 -8847943 + AluSg/x SINE Alu 132 307 -3 621 246 23 62 chr17 76590542 76590798 -8847682 - L1MC5 LINE L1 -674 7287 7042 180 0 0 0 chr17 76590915 76590935 -8847545 + (A)n Simple_repeat Simple_repeat 1 20 0 249 196 0 0 chr17 76591093 76591144 -8847336 + (TG)n Simple_repeat Simple_repeat 2 52 0 318 245 57 88 chr17 76591651 76591715 -8846765 - MIR3 SINE MIR -39 169 105 1805 158 3 26 chr17 76591715 76592018 -8846462 + AluJo SINE Alu 1 296 -16 318 245 57 88 chr17 76592018 76592112 -8846368 - MIR3 SINE MIR -103 105 16 2216 128 3 0 chr17 76592534 76592831 -8845649 + AluSx SINE Alu 1 298 -14 875 233 133 106 chr17 76593142 76593449 -8845031 - MLT1G1 LTR MaLR -60 535 207 2124 98 0 60 chr17 76593449 76593764 -8844716 - AluSq SINE Alu -17 296 1 875 233 133 106 chr17 76593764 76593975 -8844505 - MLT1G1 LTR MaLR -388 207 3 522 225 113 35 chr17 76593977 76594208 -8844272 + Charlie8 DNA MER1_type 55 303 -2114 226 214 0 0 chr17 76595750 76595792 -8842688 + G-rich Low_complexity Low_complexity 1 42 0 1161 207 22 11 chr17 76595902 76596177 -8842303 - MLT1C LTR MaLR -3 464 187 1051 149 6 6 chr17 76596182 76596357 -8842123 - L1PA16 LINE L1 -1 6165 5991 2528 67 0 13 chr17 76596395 76596708 -8841772 - AluY SINE Alu -2 309 1 2206 113 0 3 chr17 76596716 76597009 -8841471 - AluSx SINE Alu -20 292 1 2069 150 13 0 chr17 76597008 76597314 -8841166 - AluSx SINE Alu -2 310 1 * 802 144 68 0 chr17 76597323 76597455 -8841025 - FLAM_C SINE Alu -2 141 1 2451 70 3 13 chr17 76597463 76597775 -8840705 - AluY SINE Alu -2 309 1 726 166 98 12 chr17 76597777 76597940 -8840540 - MLT1C LTR MaLR -285 182 6 1093 192 94 28 chr17 76598047 76598302 -8840178 + MER58B DNA MER1_type 34 305 -36 1420 101 0 0 chr17 76598304 76598482 -8839998 + AluSx SINE Alu 1 178 -134 279 0 0 0 chr17 76599487 76599518 -8838962 + (CCTG)n Simple_repeat Simple_repeat 3 33 0 1772 186 8 10 chr17 76599828 76600216 -8838264 - Charlie5 DNA MER1_type 0 2621 2235 384 244 87 0 chr17 76600222 76600337 -8838143 - MER3 DNA MER1_type -86 123 46 276 298 160 0 chr17 76600413 76600544 -8837936 + MIR SINE MIR 52 203 -59 259 203 230 0 chr17 76600555 76600629 -8837851 + MIR SINE MIR 110 200 -62 251 139 0 0 chr17 76601114 76601150 -8837330 - L2 LINE L2 -19 3294 3259 283 336 16 41 chr17 76601235 76601357 -8837123 + L2 LINE L2 3185 3303 -10 278 279 140 9 chr17 76601375 76601536 -8836944 - MIR SINE MIR -62 146 2 274 282 24 12 chr17 76602477 76602562 -8835918 - L2 LINE L2 0 3272 3187 2387 79 7 0 chr17 76602572 76602864 -8835616 + AluSx SINE Alu 1 294 -18 492 267 97 42 chr17 76602873 76603090 -8835390 - MLT1A2 LTR MaLR -6 371 140 638 191 45 13 chr17 76603240 76603397 -8835083 - MLT1A2 LTR MaLR -212 162 1 1625 222 30 15 chr17 76603429 76603830 -8834650 - MLT1C LTR MaLR -4 463 57 312 313 112 0 chr17 76604514 76604648 -8833832 + L3 LINE CR1 1214 1362 -215 2358 92 7 0 chr17 76604811 76605104 -8833376 + AluSp SINE Alu 5 299 -14 262 279 96 0 chr17 76605328 76605432 -8833048 - MIR3 SINE MIR -90 118 5 * 292 203 0 0 chr17 76605424 76605483 -8832997 + MIR SINE MIR 108 166 -96 948 111 8 0 chr17 76605647 76605773 -8832707 - FLAM_C SINE Alu -6 127 1 1751 150 22 7 chr17 76605851 76606204 -8832276 - MSTB LTR MaLR -1 425 7 248 0 0 30 chr17 76606553 76606586 -8831894 + (TCTG)n Simple_repeat Simple_repeat 1 32 0 586 283 44 10 chr17 76606781 76606986 -8831494 - MIR SINE MIR -37 225 14 1752 154 13 27 chr17 76609257 76609555 -8828925 - AluJb SINE Alu -18 294 1 198 0 0 0 chr17 76611461 76611483 -8826997 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1819 135 11 25 chr17 76611485 76611767 -8826713 - AluSx SINE Alu -30 282 5 263 229 0 29 chr17 76611902 76611972 -8826508 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2175 94 31 0 chr17 76612005 76612293 -8826187 - AluSc SINE Alu -12 297 1 275 323 21 0 chr17 76612496 76612589 -8825891 + L2 LINE L2 3200 3294 -19 2391 82 0 28 chr17 76612802 76613121 -8825359 - AluSx SINE Alu -2 310 1 273 316 116 49 chr17 76615014 76615239 -8823241 + L3b LINE CR1 1291 1530 -53 2172 89 21 10 chr17 76616003 76616294 -8822186 + AluSq SINE Alu 1 294 -19 327 49 0 0 chr17 76616367 76616408 -8822072 + (ATTG)n Simple_repeat Simple_repeat 4 44 0 1858 140 4 0 chr17 76616408 76616680 -8821800 - AluJb SINE Alu -34 278 6 2482 87 0 10 chr17 76616805 76617117 -8821363 - AluSx SINE Alu -3 309 1 1021 208 51 0 chr17 76618495 76618692 -8819788 + MER3 DNA MER1_type 3 209 0 2344 103 0 3 chr17 76620499 76620799 -8817681 + AluSg SINE Alu 1 299 -11 257 0 30 0 chr17 76620799 76620832 -8817648 + (TA)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr17 76621327 76621347 -8817133 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1116 89 0 0 chr17 76621673 76621853 -8816627 + (TCCTG)n Simple_repeat Simple_repeat 1 180 0 267 31 0 0 chr17 76621855 76621887 -8816593 + (CTGTG)n Simple_repeat Simple_repeat 4 35 0 25 83 0 0 chr17 76622094 76622154 -8816326 + AT_rich Low_complexity Low_complexity 1 60 0 1645 146 3 69 chr17 76622268 76622556 -8815924 - AluJb SINE Alu -43 269 1 400 173 0 39 chr17 76622584 76622688 -8815792 + C-rich Low_complexity Low_complexity 2 101 0 1347 178 16 8 chr17 76622704 76622957 -8815523 - AluJo SINE Alu -14 298 44 2302 122 3 0 chr17 76623353 76623664 -8814816 - AluSp SINE Alu -1 312 1 456 248 71 21 chr17 76623671 76623812 -8814668 - MIR SINE MIR -100 162 15 2444 100 3 0 chr17 76623893 76624204 -8814276 - AluSx SINE Alu 0 312 1 190 250 222 0 chr17 76624304 76624376 -8814104 + MER5C DNA MER1_type 122 209 -115 1623 164 30 49 chr17 76624486 76624642 -8813838 - AluJo SINE Alu -14 298 149 2482 56 3 13 chr17 76624642 76624946 -8813534 - AluSc SINE Alu -8 301 1 1623 164 30 49 chr17 76624946 76625093 -8813387 - AluJo SINE Alu -163 149 1 2585 60 0 25 chr17 76625502 76625820 -8812660 + AluSg SINE Alu 1 310 0 2091 132 0 0 chr17 76625971 76626259 -8812221 + AluSx SINE Alu 18 305 -7 2185 134 0 10 chr17 76626759 76627072 -8811408 - AluJb SINE Alu -2 310 1 2424 84 3 3 chr17 76627086 76627394 -8811086 - AluY SINE Alu -3 308 1 2239 83 0 20 chr17 76627549 76627721 -8810759 - AluSp SINE Alu -9 304 139 2496 66 0 3 chr17 76627721 76628024 -8810456 - AluY SINE Alu -9 302 1 2239 83 0 20 chr17 76628024 76628151 -8810329 - AluSp SINE Alu -174 139 11 2118 98 3 60 chr17 76628781 76629097 -8809383 - AluSx SINE Alu -14 298 1 2389 96 3 0 chr17 76629097 76629398 -8809082 - AluSc SINE Alu -7 302 1 1952 145 35 0 chr17 76629398 76629566 -8808914 - AluSx SINE Alu -12 300 116 186 118 0 0 chr17 76629566 76629600 -8808880 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1952 145 35 0 chr17 76629600 76629721 -8808759 - AluSx SINE Alu -196 116 1 236 279 16 0 chr17 76630416 76630477 -8808003 - L2 LINE L2 -5 3267 3206 182 284 60 15 chr17 76631031 76631098 -8807382 + L2 LINE L2 3232 3301 -12 181 231 19 39 chr17 76631142 76631194 -8807286 - MER5A DNA MER1_type -91 98 48 1961 146 38 0 chr17 76631195 76631483 -8806997 + AluJb SINE Alu 1 299 -13 324 228 233 28 chr17 76632301 76632516 -8805964 + MER112 DNA MER1_type 1 259 -1 2295 110 0 0 chr17 76632782 76633081 -8805399 - AluSx SINE Alu -13 299 1 23 0 0 0 chr17 76633158 76633181 -8805299 + AT_rich Low_complexity Low_complexity 1 23 0 319 241 54 85 chr17 76633194 76633510 -8804970 - L1MC4a LINE L1 -120 6001 5694 2432 82 7 0 chr17 76633511 76633805 -8804675 - AluSc SINE Alu -13 296 1 30 0 0 0 chr17 76633848 76633878 -8804602 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr17 76634317 76634341 -8804139 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr17 76634593 76634631 -8803849 + AT_rich Low_complexity Low_complexity 1 38 0 1451 148 6 153 chr17 76634706 76634887 -8803593 - AluSx SINE Alu -1 311 105 2368 99 0 0 chr17 76634887 76635189 -8803291 - AluSc SINE Alu -7 302 1 1704 85 9 5 chr17 76635189 76635413 -8803067 - AluSq SINE Alu -18 295 71 1451 148 6 153 chr17 76635413 76635595 -8802885 - AluSx SINE Alu -205 107 1 1678 156 17 53 chr17 76635861 76636163 -8802317 + AluJo SINE Alu 1 291 -21 22 0 0 0 chr17 76636255 76636277 -8802203 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr17 76637024 76637049 -8801431 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2177 63 15 11 chr17 76639654 76639923 -8798557 - AluY SINE Alu -8 303 34 1552 111 5 0 chr17 76641578 76641804 -8796676 - AluSg/x SINE Alu 0 308 82 327 303 117 11 chr17 76641914 76642102 -8796378 - MER113 DNA MER1_type? -307 214 7 2515 61 0 3 chr17 76642775 76643072 -8795408 - AluY SINE Alu -15 296 1 2136 108 14 0 chr17 76643076 76643364 -8795116 - AluSx SINE Alu -22 290 1 313 231 22 11 chr17 76643525 76643616 -8794864 + L2 LINE L2 3173 3264 -8 1217 199 5 0 chr17 76643797 76644018 -8794462 - AluJb SINE Alu -6 306 85 678 125 125 0 chr17 76644130 76644242 -8794238 - FLAM_C SINE Alu -16 127 2 2049 130 7 0 chr17 76645247 76645555 -8792925 + AluSx SINE Alu 1 310 -2 2403 70 0 0 chr17 76646139 76646440 -8792040 + AluY SINE Alu 1 301 -10 2363 89 0 0 chr17 76648548 76648852 -8789628 - AluSx SINE Alu -8 304 1 1969 137 0 13 chr17 76649208 76649514 -8788966 + AluJo SINE Alu 1 302 -10 2041 115 0 34 chr17 76649514 76649654 -8788826 + AluSx SINE Alu 1 144 -168 2230 71 7 0 chr17 76649654 76649972 -8788508 + AluSp SINE Alu 1 320 0 2041 115 0 34 chr17 76649972 76650153 -8788327 + AluSx SINE Alu 144 312 0 1619 201 35 58 chr17 76650175 76650609 -8787871 + MLT1C LTR MaLR 42 465 -2 1772 159 13 10 chr17 76650637 76650938 -8787542 + AluJb SINE Alu 1 302 -10 2224 92 10 0 chr17 76650960 76651263 -8787217 - AluSp SINE Alu -7 306 1 237 208 0 19 chr17 76651264 76651317 -8787163 - MIR SINE MIR -58 150 99 330 308 23 39 chr17 76651847 76651977 -8786503 + MIR SINE MIR 23 150 -112 2248 102 0 0 chr17 76652043 76652348 -8786132 - AluSx SINE Alu -5 307 3 305 312 55 9 chr17 76652867 76652976 -8785504 - MIR SINE MIR -63 145 32 242 300 77 41 chr17 76652958 76653128 -8785352 - MIR SINE MIR -8 254 79 * 1182 131 2 3 chr17 76653706 76654395 -8784085 + (CTCA)n Simple_repeat Simple_repeat 2 866 0 2092 182 27 27 chr17 76654474 76654913 -8783567 + MLT1D LTR MaLR 8 446 -59 1718 153 35 0 chr17 76654913 76655200 -8783280 + AluJo SINE Alu 1 297 -15 2098 99 0 3 chr17 76655204 76655520 -8782960 - AluSx SINE Alu 0 315 1 826 154 0 22 chr17 76655760 76655896 -8782584 + FLAM_C SINE Alu 1 133 0 1706 144 41 3 chr17 76656883 76657175 -8781305 + AluJb SINE Alu 1 303 -9 253 289 0 13 chr17 76658170 76658222 -8780258 + MER91B DNA MER1_type 9 61 -129 2069 103 0 20 chr17 76658222 76658524 -8779956 + AluSx SINE Alu 1 296 -16 253 289 0 13 chr17 76658524 76658547 -8779933 + MER91B DNA MER1_type 61 83 -107 * 452 324 33 0 chr17 76658538 76658720 -8779760 + MIR SINE MIR 39 226 -36 444 261 0 0 chr17 76658923 76659053 -8779427 + (CA)n Simple_repeat Simple_repeat 1 130 0 207 329 24 0 chr17 76659764 76659846 -8778634 + GA-rich Low_complexity Low_complexity 4 87 0 407 176 0 14 chr17 76661339 76661413 -8777067 + MER5B DNA MER1_type 102 174 -4 586 113 0 0 chr17 76661456 76661536 -8776944 - MADE1 DNA Mariner 0 80 1 1006 79 0 14 chr17 76661692 76661831 -8776649 + AluYb8 SINE Alu 1 137 -181 374 149 0 4 chr17 76661831 76661902 -8776578 - Alu SINE Alu -253 50 2 1966 195 35 12 chr17 76661903 76662465 -8776015 - L1MC/D LINE L1 -743 5403 4890 951 155 21 52 chr17 76662525 76662719 -8775761 - MER58A DNA MER1_type 0 224 37 346 281 104 18 chr17 76662736 76662900 -8775580 - L1MC5 LINE L1 -524 7437 7260 2432 59 3 0 chr17 76662947 76663251 -8775229 - AluY SINE Alu -6 305 1 416 302 112 14 chr17 76663385 76663680 -8774800 + L1ME4a LINE L1 5575 5898 -223 1901 93 0 77 chr17 76663689 76664020 -8774460 + AluSx SINE Alu 1 312 0 682 244 40 108 chr17 76664084 76664249 -8774231 - MIR SINE MIR 0 262 118 2065 113 3 0 chr17 76664249 76664541 -8773939 + AluSx SINE Alu 1 293 -19 682 244 40 108 chr17 76664541 76664625 -8773855 - MIR SINE MIR -144 118 30 2038 118 3 0 chr17 76664820 76665116 -8773364 - AluSx SINE Alu -15 297 1 414 326 71 10 chr17 76666706 76666902 -8771578 + MIR SINE MIR 23 230 -32 206 32 32 0 chr17 76666928 76666959 -8771521 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2047 120 3 0 chr17 76666996 76667314 -8771166 - AluSq SINE Alu 0 319 1 197 354 10 31 chr17 76667867 76667963 -8770517 + MIR SINE MIR 118 211 -51 1962 101 59 0 chr17 76668190 76668478 -8770002 + AluSx SINE Alu 2 306 -6 222 370 11 0 chr17 76668846 76668938 -8769542 - L2 LINE L2 -18 3295 3203 2048 112 3 0 chr17 76669089 76669374 -8769106 + AluSq SINE Alu 16 301 -12 2010 108 14 0 chr17 76669418 76669705 -8768775 + AluSq SINE Alu 1 291 -22 1521 166 13 45 chr17 76670153 76670461 -8768019 - AluJo SINE Alu -14 298 1 296 246 98 49 chr17 76670508 76670630 -8767850 - MIR SINE MIR -55 207 80 205 362 43 0 chr17 76670973 76671067 -8767413 + L3b LINE CR1 1286 1383 -200 606 229 17 0 chr17 76671389 76671507 -8766973 - AluSq/x SINE Alu -192 121 2 869 157 39 39 chr17 76671509 76671741 -8766739 - Tigger2 DNA MER2_type -56 2652 2421 2089 117 0 3 chr17 76671741 76672041 -8766439 + AluSg SINE Alu 1 299 -11 869 157 39 39 chr17 76672041 76672099 -8766381 - Tigger2 DNA MER2_type -287 2421 2 1900 105 14 21 chr17 76672129 76672414 -8766066 + AluSx SINE Alu 1 283 -29 692 221 22 0 chr17 76672425 76672561 -8765919 - MER3 DNA MER1_type -70 139 1 866 165 0 0 chr17 76672839 76672972 -8765508 + FLAM_C SINE Alu 1 133 0 1363 165 39 16 chr17 76673022 76673277 -8765203 + AluJo SINE Alu 42 302 -10 2179 96 10 10 chr17 76674280 76674593 -8763887 + AluSq SINE Alu 1 313 0 264 261 117 27 chr17 76674714 76674825 -8763655 + MIR SINE MIR 7 127 -135 428 284 39 0 chr17 76674895 76675022 -8763458 + MIR SINE MIR 119 250 -12 823 137 24 54 chr17 76675048 76675089 -8763391 - MLT1B LTR MaLR -15 375 334 3704 114 19 15 chr17 76675089 76675614 -8762866 - MER1A DNA MER1_type 0 527 1 823 137 24 54 chr17 76675614 76675740 -8762740 - MLT1B LTR MaLR -56 334 213 369 159 84 9 chr17 76675750 76675857 -8762623 - AluSc SINE Alu -64 235 121 425 53 27 40 chr17 76676004 76676079 -8762401 - MADE1 DNA Mariner -6 74 1 1667 161 7 7 chr17 76676980 76677288 -8761192 - AluJb SINE Alu 0 308 1 303 229 253 32 chr17 76677296 76677433 -8761047 - MIR SINE MIR -63 145 34 828 161 167 158 chr17 76677682 76677737 -8760743 + MER4C LTR ERV1 1 54 -411 1759 130 0 25 chr17 76677737 76678014 -8760466 + AluJo SINE Alu 26 295 -17 828 161 167 158 chr17 76678014 76678419 -8760061 + MER4C LTR ERV1 54 465 0 2146 110 0 10 chr17 76678532 76678832 -8759648 - AluSx SINE Alu -15 297 1 21 0 0 0 chr17 76679798 76679819 -8758661 + GC_rich Low_complexity Low_complexity 1 21 0 271 295 0 13 chr17 76681702 76681780 -8756700 + MIR SINE MIR 33 109 -153 190 294 0 0 chr17 76681788 76681839 -8756641 + L2 LINE L2 3210 3260 -12 1908 113 4 0 chr17 76682101 76682367 -8756113 - AluSx SINE Alu -45 267 1 785 213 204 5 chr17 76683660 76683944 -8754536 + MER58 DNA MER1_type 1 2420 0 365 299 53 78 chr17 76685930 76686174 -8752306 + MIR SINE MIR 19 256 -6 191 300 109 9 chr17 76686316 76686426 -8752054 - MIR SINE MIR -59 203 83 22 35 0 0 chr17 76686483 76686512 -8751968 + AT_rich Low_complexity Low_complexity 1 29 0 978 208 14 19 chr17 76688182 76688394 -8750086 - MER58A DNA MER1_type 0 224 14 1646 158 7 34 chr17 76688891 76689189 -8749291 - AluSg SINE Alu -19 291 2 2389 56 13 0 chr17 76690859 76691161 -8747319 - AluSq SINE Alu -7 306 1 1838 121 59 21 chr17 76691609 76691898 -8746582 + AluSg SINE Alu 1 300 -10 2230 96 3 0 chr17 76691989 76692282 -8746198 + AluSp SINE Alu 2 295 -18 216 0 0 0 chr17 76692340 76692364 -8746116 + (A)n Simple_repeat Simple_repeat 1 24 0 2005 113 10 0 chr17 76693502 76693794 -8744686 - AluSx SINE Alu -17 295 1 2267 74 0 3 chr17 76693984 76694282 -8744198 + AluY SINE Alu 1 297 -14 402 242 62 101 chr17 76695537 76695621 -8742859 + MIR SINE MIR 34 109 -153 2188 96 0 7 chr17 76695621 76695923 -8742557 + AluSx SINE Alu 1 300 -12 402 242 62 101 chr17 76695923 76696016 -8742464 + MIR SINE MIR 109 204 -58 2062 103 33 0 chr17 76696206 76696506 -8741974 + AluSp SINE Alu 1 310 -3 368 311 27 13 chr17 76696571 76696730 -8741750 + MIR3 SINE MIR 5 165 -63 2087 108 13 0 chr17 76696952 76697257 -8741223 - AluSq SINE Alu -4 309 1 282 325 126 0 chr17 76697355 76697506 -8740974 - MIR SINE MIR -71 191 22 264 277 50 20 chr17 76697836 76697937 -8740543 + MIR SINE MIR 89 192 -70 21 0 0 0 chr17 76698494 76698515 -8739965 + AT_rich Low_complexity Low_complexity 1 21 0 277 93 23 0 chr17 76699274 76699317 -8739163 + MIR SINE MIR 109 152 -56 2246 105 0 3 chr17 76699317 76699630 -8738850 + AluSx SINE Alu 1 312 0 871 234 0 0 chr17 76699633 76699804 -8738676 + AluJb SINE Alu 122 292 -20 1028 177 23 6 chr17 76699806 76699981 -8738499 + MER45A DNA AcHobo 1 178 0 266 303 10 30 chr17 76699985 76700084 -8738396 + MIR SINE MIR 154 250 -12 1916 142 20 0 chr17 76701467 76701762 -8736718 + AluSx SINE Alu 1 301 -11 457 301 13 6 chr17 76702142 76702298 -8736182 + MIR3 SINE MIR 49 205 -3 802 254 41 5 chr17 76702408 76702605 -8735875 - MIR SINE MIR -39 223 20 433 264 0 50 chr17 76703510 76703631 -8734849 - MER5B DNA MER1_type -9 169 55 199 294 0 15 chr17 76703634 76703702 -8734778 + MER5B DNA MER1_type 13 79 -99 * 273 195 73 12 chr17 76703641 76703723 -8734757 - MER5A DNA MER1_type -19 170 84 633 244 112 5 chr17 76704575 76704772 -8733708 - MIR SINE MIR -14 248 31 340 283 15 96 chr17 76704876 76705074 -8733406 - MIR SINE MIR -79 183 2 1286 149 169 0 chr17 76706237 76706498 -8731982 + AluJb SINE Alu 1 305 -7 204 273 0 0 chr17 76706501 76706556 -8731924 + L3b LINE CR1 1333 1387 -196 2146 117 7 0 chr17 76709140 76709447 -8729033 - AluSx SINE Alu -3 309 1 1593 258 107 39 chr17 76709659 76709841 -8728639 - MER115 DNA AcHobo -3 690 522 2133 99 10 0 chr17 76709841 76710135 -8728345 + AluSx SINE Alu 1 297 -15 1593 258 107 39 chr17 76710135 76710515 -8727965 - MER115 DNA AcHobo -171 522 90 347 168 65 56 chr17 76711611 76711718 -8726762 + MIR3 SINE MIR 81 188 -20 290 263 161 25 chr17 76711758 76711876 -8726604 + MIR3 SINE MIR 3 136 -72 2136 99 3 0 chr17 76712561 76712844 -8725636 + AluSx SINE Alu 1 284 -28 876 165 9 85 chr17 76713069 76713126 -8725354 + AluJo SINE Alu 86 146 -166 2104 125 7 0 chr17 76713126 76713430 -8725050 + AluSx SINE Alu 1 306 -6 876 165 9 85 chr17 76713430 76713584 -8724896 + AluJo SINE Alu 146 281 -31 358 172 0 23 chr17 76713634 76713721 -8724759 + GA-rich Low_complexity Low_complexity 1 85 0 305 283 68 52 chr17 76714156 76714176 -8724304 - LTR16C LTR ERVL -76 415 397 912 189 68 5 chr17 76714176 76714382 -8724098 + MER20 DNA MER1_type 1 219 0 305 283 68 52 chr17 76714382 76714612 -8723868 - LTR16C LTR ERVL -94 397 161 2142 103 3 28 chr17 76715608 76715928 -8722552 + AluSx SINE Alu 1 312 0 341 283 39 19 chr17 76717229 76717383 -8721097 - MIR SINE MIR -62 146 36 1288 140 19 23 chr17 76718013 76718246 -8720234 - AluSg/x SINE Alu 0 312 83 343 235 0 67 chr17 76718565 76718684 -8719796 + MIR SINE MIR 80 190 -72 512 192 96 24 chr17 76719137 76719262 -8719218 - L2 LINE L2 0 3313 3180 1823 137 41 10 chr17 76719813 76719985 -8718495 - AluSx SINE Alu -10 302 116 318 50 0 0 chr17 76719985 76720025 -8718455 + (TTG)n Simple_repeat Simple_repeat 2 41 0 1823 137 41 10 chr17 76720025 76720145 -8718335 - AluSx SINE Alu -196 116 1 2204 97 0 10 chr17 76720624 76720932 -8717548 - AluSq SINE Alu -8 305 1 1012 148 69 28 chr17 76720934 76721150 -8717330 + MER2 DNA MER2_type 120 344 -1 2052 125 0 20 chr17 76721154 76721459 -8717021 - AluSx SINE Alu -13 299 1 825 284 108 38 chr17 76721530 76722283 -8716197 + L1MC5 LINE L1 6063 6899 -921 703 156 9 0 chr17 76722536 76722645 -8715835 - FLAM_C SINE Alu -32 111 2 255 179 0 0 chr17 76722786 76722825 -8715655 - Alu SINE Alu -263 39 1 1831 149 17 7 chr17 76722849 76723151 -8715329 + AluJb SINE Alu 1 305 -7 246 305 31 0 chr17 76723405 76723485 -8714995 - MIR SINE MIR -96 112 42 814 182 0 19 chr17 76723512 76723666 -8714814 - FRAM SINE Alu 0 40 1 1831 158 7 0 chr17 76724908 76725200 -8713280 - AluJb SINE Alu -18 294 1 2374 55 0 7 chr17 76725359 76725650 -8712830 - AluY SINE Alu -22 289 1 1301 171 4 13 chr17 76727902 76728136 -8710344 + AluJb SINE Alu 74 305 -7 801 312 162 48 chr17 76728776 76729098 -8709382 + L2 LINE L2 1970 2254 -1059 1546 174 59 0 chr17 76729098 76729385 -8709095 - AluJb SINE Alu -8 304 1 801 312 162 48 chr17 76729385 76730277 -8708203 + L2 LINE L2 2254 3308 -5 544 129 12 0 chr17 76731445 76731530 -8706950 - MSTA LTR MaLR -342 86 1 764 192 45 40 chr17 76731564 76731741 -8706739 + MSTD LTR MaLR 217 394 -2 1559 95 5 0 chr17 76731864 76732074 -8706406 - AluSx SINE Alu -101 211 1 1770 154 31 3 chr17 76732074 76732366 -8706114 - AluJb SINE Alu -12 300 1 199 256 0 0 chr17 76732415 76732458 -8706022 + L2 LINE L2 3179 3221 -92 23 78 0 0 chr17 76733326 76733377 -8705103 + GC_rich Low_complexity Low_complexity 1 51 0 383 73 0 103 chr17 76733752 76733888 -8704592 + (CGGGGG)n Simple_repeat Simple_repeat 2 123 0 277 242 10 57 chr17 76734678 76734804 -8703676 - MIR SINE MIR -49 213 98 272 353 16 27 chr17 76734804 76734991 -8703489 - MIR SINE MIR -26 236 52 549 325 82 84 chr17 76735119 76735298 -8703182 + LTR67 LTR ERVL 21 199 -358 1586 101 0 111 chr17 76735298 76735425 -8703055 + AluJb SINE Alu 23 162 -150 2218 64 0 64 chr17 76735425 76735739 -8702741 + AluSx SINE Alu 11 304 -8 1586 101 0 111 chr17 76735739 76735927 -8702553 + AluJb SINE Alu 162 303 -9 549 325 82 84 chr17 76735927 76736285 -8702195 + LTR67 LTR ERVL 199 557 0 342 0 0 0 chr17 76736471 76736509 -8701971 + (TG)n Simple_repeat Simple_repeat 2 39 0 240 59 0 0 chr17 76736557 76736591 -8701889 + (TG)n Simple_repeat Simple_repeat 2 35 0 1710 143 7 7 chr17 76736591 76736871 -8701609 - AluJb SINE Alu -27 285 6 2097 122 0 3 chr17 76737731 76738035 -8700445 - AluSx SINE Alu -9 303 1 234 0 0 0 chr17 76738084 76738110 -8700370 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1598 158 0 4 chr17 76738111 76738358 -8700122 - AluJb SINE Alu -55 257 12 206 290 0 40 chr17 76738947 76739047 -8699433 + GA-rich Low_complexity Low_complexity 5 100 0 567 278 101 56 chr17 76739338 76739424 -8699056 + L2 LINE L2 2218 2299 -1015 1945 122 3 20 chr17 76739424 76739727 -8698753 + AluSx SINE Alu 1 298 -14 567 278 101 56 chr17 76739727 76739946 -8698534 + L2 LINE L2 2299 2537 -777 302 203 85 0 chr17 76739954 76740013 -8698467 - MER58A DNA MER1_type -12 212 149 905 101 0 0 chr17 76740040 76740159 -8698321 - AluSq/x SINE Alu -193 119 1 592 271 6 18 chr17 76740161 76740265 -8698215 - MER58A DNA MER1_type -177 164 61 1244 233 0 4 chr17 76740265 76740505 -8697975 + MER8 DNA MER2_type 1 239 0 592 271 6 18 chr17 76740505 76740566 -8697914 - MER58A DNA MER1_type -280 61 1 2376 89 0 0 chr17 76740610 76740914 -8697566 - AluSx SINE Alu -8 304 1 522 286 184 49 chr17 76740933 76740944 -8697536 + L2 LINE L2 2636 2644 -669 1794 170 0 16 chr17 76740944 76741124 -8697356 - AluJb SINE Alu 0 312 138 1906 157 3 0 chr17 76741124 76741424 -8697056 - AluSx SINE Alu -11 301 1 1794 170 0 16 chr17 76741424 76741560 -8696920 - AluJb SINE Alu -174 138 1 522 286 184 49 chr17 76741560 76741928 -8696552 + L2 LINE L2 2644 2961 -352 514 320 63 32 chr17 76741928 76742020 -8696460 - MIR SINE MIR 0 262 174 1756 167 28 0 chr17 76742020 76742302 -8696178 - AluJo SINE Alu -16 296 7 514 320 63 32 chr17 76742302 76742462 -8696018 - MIR SINE MIR -88 174 2 1580 128 40 90 chr17 76742470 76742791 -8695689 - AluSq SINE Alu -8 305 1 522 286 184 49 chr17 76742791 76742897 -8695583 + L2 LINE L2 2967 3057 -256 514 0 0 0 chr17 76742897 76742954 -8695526 + (TTTA)n Simple_repeat Simple_repeat 1 176 0 675 171 18 0 chr17 76742954 76743065 -8695415 - FLAM_A SINE Alu -18 115 3 522 286 184 49 chr17 76743065 76743161 -8695319 + L2 LINE L2 3056 3312 -1 362 271 15 15 chr17 76743450 76743583 -8694897 + LTR33 LTR ERVL 380 512 -9 297 372 33 6 chr17 76744096 76744276 -8694204 - MIR SINE MIR -8 254 70 2505 71 0 10 chr17 76744314 76744625 -8693855 + AluY SINE Alu 1 308 -3 681 267 0 0 chr17 76744637 76744798 -8693682 + MIR SINE MIR 92 252 -10 2319 100 3 7 chr17 76745089 76745389 -8693091 + AluSx SINE Alu 1 299 -13 333 0 0 0 chr17 76746001 76746038 -8692442 + (TAA)n Simple_repeat Simple_repeat 3 39 0 2193 123 20 0 chr17 76746038 76746338 -8692142 + AluSx SINE Alu 7 312 0 1830 132 4 0 chr17 76747211 76747468 -8691012 + AluSx SINE Alu 44 301 -11 1622 198 0 10 chr17 76747487 76747775 -8690705 - AluJb SINE Alu -2 310 26 2240 98 0 14 chr17 76749216 76749511 -8688969 + AluSq SINE Alu 1 291 -22 2824 67 8 5 chr17 76750023 76750397 -8688083 - THE1C LTR MaLR 0 375 1 2309 117 0 0 chr17 76751111 76751411 -8687069 + AluSx SINE Alu 1 300 -12 836 165 0 0 chr17 76752129 76752262 -8686218 - FLAM_C SINE Alu 0 133 1 2565 90 0 0 chr17 76752548 76752859 -8685621 - AluSx SINE Alu -1 311 1 2401 90 3 3 chr17 76753485 76753784 -8684696 - AluSq SINE Alu -14 299 1 2523 96 0 0 chr17 76754754 76755067 -8683413 - AluSq SINE Alu 0 313 1 325 151 82 41 chr17 76755580 76755653 -8682827 - MER69 DNA AcHobo 0 2526 2451 * 742 186 21 7 chr17 76755651 76755796 -8682684 - MER69 DNA AcHobo -1079 147 1 192 363 22 11 chr17 76758125 76758216 -8680264 + MIR SINE MIR 165 256 -6 494 244 55 28 chr17 76758590 76758773 -8679707 - MIR SINE MIR -61 147 4 369 0 0 0 chr17 76761479 76761520 -8676960 + (CA)n Simple_repeat Simple_repeat 1 41 0 306 0 0 0 chr17 76762658 76762692 -8675788 + (CA)n Simple_repeat Simple_repeat 2 35 0 2355 113 0 0 chr17 76764031 76764381 -8674099 - AluY SINE Alu 0 350 1 2505 87 0 0 chr17 76764383 76764692 -8673788 - AluSq SINE Alu -4 309 1 1926 121 3 62 chr17 76764695 76765001 -8673479 - AluSx SINE Alu -16 296 9 1996 156 0 26 chr17 76766224 76766532 -8671948 + AluJb SINE Alu 1 300 -12 505 292 10 46 chr17 76766846 76767041 -8671439 - MIR3 SINE MIR -4 204 17 2136 143 0 3 chr17 76767302 76767609 -8670871 + AluSx SINE Alu 1 306 -6 361 0 41 0 chr17 76767763 76767812 -8670668 + (GA)n Simple_repeat Simple_repeat 2 52 0 1792 130 61 0 chr17 76767813 76768074 -8670406 - AluJb SINE Alu -35 277 1 347 169 70 0 chr17 76768195 76768266 -8670214 - MER103 DNA DNA -87 79 4 814 194 58 31 chr17 76768299 76768490 -8669990 - MIR SINE MIR 0 262 67 1708 152 6 68 chr17 76768625 76768948 -8669532 - AluJo SINE Alu -9 303 1 535 239 58 19 chr17 76769304 76769459 -8669021 - MER5B DNA MER1_type -17 161 1 186 43 0 0 chr17 76771237 76771260 -8667220 + (CCCCCG)n Simple_repeat Simple_repeat 1 23 0 2359 92 0 7 chr17 76771708 76772002 -8666478 - AluSq SINE Alu -21 292 1 385 283 24 101 chr17 76772078 76772325 -8666155 + MARNA DNA Mariner 316 543 -43 2212 114 3 13 chr17 76772498 76772806 -8665674 - AluSx SINE Alu -7 305 1 2296 116 0 0 chr17 76773118 76773419 -8665061 - AluSx SINE Alu -11 301 1 564 206 48 0 chr17 76775124 76775250 -8663230 - MER94 DNA DNA -2 132 1 2510 88 0 0 chr17 76776352 76776660 -8661820 + AluSx SINE Alu 1 308 -4 1820 162 7 10 chr17 76776670 76776967 -8661513 + AluJb SINE Alu 1 296 -16 1274 53 13 0 chr17 76777160 76777311 -8661169 + AluSp SINE Alu 1 153 -160 5060 148 77 15 chr17 76777459 76777615 -8660865 + L1MA9 LINE L1 5190 5335 -977 2035 110 71 0 chr17 76777615 76777896 -8660584 + AluSx SINE Alu 1 301 -11 5060 148 77 15 chr17 76777896 76778766 -8659714 + L1MA9 LINE L1 5335 6278 -34 1273 117 0 11 chr17 76778779 76778959 -8659521 - AluSg/x SINE Alu 0 312 135 230 128 21 0 chr17 76778959 76779006 -8659474 + L1MA9 LINE L1 6265 6312 0 349 304 24 8 chr17 76779096 76779221 -8659259 - L2 LINE L2 0 3313 3187 1151 262 174 34 chr17 76779423 76779580 -8658900 + L2 LINE L2 1552 1686 -1628 2305 96 10 0 chr17 76779580 76779873 -8658607 - AluSx SINE Alu -16 296 1 1151 262 174 34 chr17 76779873 76780340 -8658140 + L2 LINE L2 1686 2264 -1050 1899 166 3 3 chr17 76780460 76780767 -8657713 - AluSx SINE Alu -5 307 1 864 195 59 6 chr17 76780802 76780997 -8657483 + AluJb SINE Alu 104 307 0 2131 133 3 0 chr17 76781006 76781308 -8657172 + AluJo SINE Alu 1 303 -9 2079 90 52 0 chr17 76781605 76781894 -8656586 + AluY SINE Alu 1 304 -7 201 333 86 0 chr17 76781998 76782115 -8656365 - MIR SINE MIR -80 182 56 220 304 20 10 chr17 76782178 76782280 -8656200 - MER5A DNA MER1_type -76 113 11 180 283 133 33 chr17 76782340 76782460 -8656020 - L2 LINE L2 -1 3271 3140 2348 103 0 7 chr17 76782517 76782819 -8655661 - AluSx SINE Alu -12 300 1 403 275 176 37 chr17 76783488 76783742 -8654738 - L2 LINE L2 -1 3312 3095 2329 106 0 13 chr17 76783742 76784045 -8654435 + AluSx SINE Alu 1 299 -13 403 275 176 37 chr17 76784045 76784247 -8654233 - L2 LINE L2 -218 3095 2922 2113 114 0 27 chr17 76784247 76784546 -8653934 + AluSx SINE Alu 11 301 -11 403 275 176 37 chr17 76784546 76784689 -8653791 - L2 LINE L2 -391 2922 2622 280 287 53 31 chr17 76784774 76784925 -8653555 - MIR SINE MIR -56 152 40 415 254 16 41 chr17 76786392 76786514 -8651966 - MIR SINE MIR -57 151 33 2271 91 0 3 chr17 76786623 76786910 -8651570 + AluSx SINE Alu 1 286 -26 1531 93 45 93 chr17 76787044 76787223 -8651257 - AluSg SINE Alu -12 298 112 2451 84 0 0 chr17 76787223 76787522 -8650958 - AluSq SINE Alu -14 299 1 2507 62 3 0 chr17 76787529 76787833 -8650647 - AluY SINE Alu -6 305 1 1531 93 45 93 chr17 76787833 76787914 -8650566 - AluSg SINE Alu -204 106 43 1904 111 21 99 chr17 76788097 76788430 -8650050 - AluYb8 SINE Alu -11 307 1 246 320 82 0 chr17 76788430 76788527 -8649953 - L1MC/D LINE L1 -2072 5736 5632 2305 115 0 7 chr17 76788608 76788913 -8649567 - AluSq SINE Alu -10 303 1 251 302 101 7 chr17 76789206 76789345 -8649135 + MIR3 SINE MIR 34 185 -23 2284 114 3 10 chr17 76789422 76789730 -8648750 + AluSq SINE Alu 1 306 -7 191 36 36 0 chr17 76789771 76789799 -8648681 + (TG)n Simple_repeat Simple_repeat 2 30 0 192 179 0 0 chr17 76789855 76789894 -8648586 + (TA)n Simple_repeat Simple_repeat 2 40 0 2297 95 0 3 chr17 76790148 76790465 -8648015 - AluSx SINE Alu 0 316 1 303 315 96 19 chr17 76791069 76791383 -8647097 + L2 LINE L2 2451 2788 -526 889 144 0 0 chr17 76791386 76791518 -8646962 + AluJo/FLAM SINE Alu 1 132 -180 1166 119 25 0 chr17 76791520 76791680 -8646800 + AluSq SINE Alu 1 164 -149 406 333 111 41 chr17 76791743 76792157 -8646323 + L2 LINE L2 2871 3313 0 959 179 20 15 chr17 76793901 76794097 -8644383 + MER20 DNA MER1_type 4 200 -19 416 280 149 17 chr17 76794249 76794424 -8644056 + MIR3 SINE MIR 7 204 -4 321 322 8 16 chr17 76794595 76794716 -8643764 - L1M4 LINE L1 -2946 3200 3081 408 158 20 20 chr17 76794716 76794817 -8643663 + CT-rich Low_complexity Low_complexity 4 104 0 353 191 16 0 chr17 76794877 76794940 -8643540 + MER58B DNA MER1_type 1 181 -160 299 289 132 31 chr17 76794957 76795116 -8643364 - MER21B LTR ERV1 -364 499 325 * 356 164 15 0 chr17 76795112 76795179 -8643301 + MER58B DNA MER1_type 169 236 -105 873 121 8 0 chr17 76795185 76795317 -8643163 - AluJb SINE Alu -179 133 1 459 270 17 0 chr17 76795318 76795433 -8643047 + MER58B DNA MER1_type 225 341 0 1679 107 13 90 chr17 76795966 76796276 -8642204 + AluSx SINE Alu 1 286 -26 192 229 0 42 chr17 76796399 76796447 -8642033 - L2 LINE L2 -225 3047 3002 22 0 0 0 chr17 76800162 76800184 -8638296 + AT_rich Low_complexity Low_complexity 1 22 0 488 210 60 24 chr17 76800311 76800478 -8638002 + MER53 DNA DNA 1 173 -16 204 245 0 0 chr17 76801125 76801174 -8637306 + MIR SINE MIR 99 147 -115 2240 111 0 0 chr17 76801263 76801570 -8636910 - AluSx SINE Alu 0 312 6 784 143 16 8 chr17 76802755 76802881 -8635599 + AluJo/FLAM SINE Alu 1 127 -185 2131 102 0 3 chr17 76802882 76803175 -8635305 - AluSg SINE Alu -18 292 1 22 0 0 0 chr17 76803175 76803197 -8635283 + AT_rich Low_complexity Low_complexity 1 22 0 257 260 0 39 chr17 76803198 76803275 -8635205 + MIR SINE MIR 77 150 -58 2284 85 6 22 chr17 76803331 76803648 -8634832 - AluSx SINE Alu 0 312 1 688 172 30 30 chr17 76803670 76803804 -8634676 - AluJo SINE Alu -178 134 1 425 269 141 32 chr17 76804236 76804392 -8634088 - MIR SINE MIR -29 233 61 2123 110 0 0 chr17 76804912 76805230 -8633250 - AluSx SINE Alu 0 318 1 213 270 48 0 chr17 76805230 76805293 -8633187 - MIR SINE MIR -59 149 84 213 39 0 0 chr17 76805293 76805319 -8633161 + (CAGAG)n Simple_repeat Simple_repeat 3 28 0 608 110 0 0 chr17 76806273 76806355 -8632125 + AluS SINE Alu 1 82 -231 1934 99 51 0 chr17 76807668 76807941 -8630539 + AluSq SINE Alu 1 287 -26 1697 169 53 3 chr17 76808345 76808629 -8629851 + AluJb SINE Alu 1 298 -14 187 292 77 15 chr17 76809422 76809487 -8628993 - L2 LINE L2 -39 3233 3165 195 402 0 0 chr17 76809789 76809876 -8628604 - MER5A DNA MER1_type -40 149 63 1988 122 31 0 chr17 76810081 76810367 -8628113 - AluSx SINE Alu -13 299 5 1785 166 14 0 chr17 76811092 76811388 -8627092 + AluJo SINE Alu 1 300 -12 334 278 70 9 chr17 76812464 76812579 -8625901 - MIR SINE MIR -69 139 18 391 296 68 20 chr17 76814844 76815064 -8623416 + MIR SINE MIR 12 240 -22 221 344 123 8 chr17 76815233 76815355 -8623125 - L2 LINE L2 0 3272 3137 1121 93 16 50 chr17 76815373 76815384 -8623096 + AluSg/x SINE Alu 127 137 -175 1811 110 37 37 chr17 76815384 76815683 -8622797 + AluSg SINE Alu 1 299 -11 1121 93 16 50 chr17 76815683 76815853 -8622627 + AluSg/x SINE Alu 137 302 -10 912 192 0 0 chr17 76816819 76816975 -8621505 + AluJb SINE Alu 134 289 -23 2119 113 13 3 chr17 76817027 76817327 -8621153 + AluSx SINE Alu 1 303 -9 2027 92 78 0 chr17 76817329 76817611 -8620869 + AluSp SINE Alu 1 304 -9 266 309 10 0 chr17 76817664 76817761 -8620719 + L1MB5 LINE L1 5757 5854 -267 2139 119 3 0 chr17 76817925 76818218 -8620262 - AluSx SINE Alu -18 294 1 336 98 0 0 chr17 76819383 76819434 -8619046 + U5 snRNA snRNA 1 51 -65 2326 101 0 0 chr17 76819618 76819924 -8618556 + AluSq SINE Alu 1 306 -7 649 230 6 12 chr17 76819925 76820090 -8618390 - MER117 DNA MER1_type -17 180 17 571 343 29 24 chr17 76822897 76823152 -8615328 + MIR SINE MIR 4 261 -1 1743 134 51 0 chr17 76823666 76823941 -8614539 - AluSx SINE Alu -17 295 7 180 257 143 19 chr17 76824461 76824566 -8613914 - L2 LINE L2 -283 2989 2872 2218 115 3 6 chr17 76824788 76825101 -8613379 - AluSq SINE Alu -1 312 1 222 329 27 48 chr17 76825141 76825287 -8613193 - MIR SINE MIR -1 261 119 246 337 11 33 chr17 76825452 76825544 -8612936 - L2 LINE L2 0 3272 3183 2402 97 0 0 chr17 76825678 76825989 -8612491 - AluSq SINE Alu -2 311 1 258 319 53 35 chr17 76826038 76826151 -8612329 - L2 LINE L2 -194 3078 2964 514 289 82 16 chr17 76826383 76826577 -8611903 - MIR SINE MIR -27 235 29 271 261 123 23 chr17 76828152 76828282 -8610198 - MIR SINE MIR -56 206 64 279 348 68 52 chr17 76828986 76829236 -8609244 + MIR SINE MIR 8 261 -1 21 57 0 0 chr17 76829800 76829835 -8608645 + AT_rich Low_complexity Low_complexity 1 35 0 783 143 15 15 chr17 76829843 76829976 -8608504 + FLAM_C SINE Alu 1 133 0 2350 94 0 0 chr17 76829981 76830289 -8608191 + AluSp SINE Alu 1 308 -5 1652 186 9 47 chr17 76830505 76830844 -8607636 + L1MB5 LINE L1 5847 6172 -2 2152 113 7 3 chr17 76830852 76831162 -8607318 + AluSq SINE Alu 1 311 -2 1353 196 13 66 chr17 76831177 76831494 -8606986 + AluJo SINE Alu 12 311 -1 1869 132 36 10 chr17 76831502 76831805 -8606675 + AluSx SINE Alu 2 312 0 198 0 0 0 chr17 76833447 76833469 -8605011 + (CA)n Simple_repeat Simple_repeat 1 22 0 327 49 0 0 chr17 76833890 76833931 -8604549 + (CA)n Simple_repeat Simple_repeat 2 42 0 189 195 0 0 chr17 76834754 76834795 -8603685 + T-rich Low_complexity Low_complexity 1 41 0 479 275 236 11 chr17 76836847 76837053 -8601427 - MIR SINE MIR 0 262 18 2347 74 3 3 chr17 76837320 76837618 -8600862 - AluSp SINE Alu -15 298 1 1934 143 3 32 chr17 76837618 76837932 -8600548 - AluJb SINE Alu -5 307 3 21 36 0 0 chr17 76838074 76838102 -8600378 + AT_rich Low_complexity Low_complexity 1 28 0 1914 143 3 16 chr17 76838102 76838279 -8600201 - AluSx SINE Alu -2 310 137 2749 7 3 0 chr17 76838279 76838587 -8599893 - AluYa5 SINE Alu -2 309 1 1914 143 3 16 chr17 76838587 76838723 -8599757 - AluSx SINE Alu -175 137 1 198 0 0 0 chr17 76838736 76838758 -8599722 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1825 128 37 7 chr17 76839258 76839554 -8598926 + AluSq SINE Alu 1 305 -8 333 208 0 0 chr17 76839554 76839631 -8598849 + G-rich Low_complexity Low_complexity 1 77 0 1872 147 6 34 chr17 76839903 76840223 -8598257 - AluJb SINE Alu -1 311 1 531 0 0 0 chr17 76840365 76840424 -8598056 + (CA)n Simple_repeat Simple_repeat 2 60 0 1199 141 0 16 chr17 76840483 76840667 -8597813 + AluSx SINE Alu 1 181 -131 607 141 117 39 chr17 76841003 76841131 -8597349 - FLAM_C SINE Alu 0 143 6 1564 138 31 35 chr17 76841147 76841408 -8597072 - AluJo SINE Alu -14 298 39 1787 128 78 0 chr17 76841756 76842038 -8596442 + AluSp SINE Alu 1 304 -9 247 269 151 21 chr17 76842049 76842142 -8596338 - MIR SINE MIR -149 113 9 1049 161 0 0 chr17 76842260 76842421 -8596059 + FRAM SINE Alu 1 158 -18 2453 28 7 0 chr17 76842427 76842717 -8595763 + AluY SINE Alu 1 292 -19 2049 80 36 4 chr17 77043897 77044207 -8394273 - AluSg SINE Alu 0 319 1 243 0 0 0 chr17 77044606 77044633 -8393847 + (T)n Simple_repeat Simple_repeat 1 27 0 1051 185 40 14 chr17 77045013 77045195 -8393285 - AluJo SINE Alu 0 312 136 327 25 0 0 chr17 77045195 77045235 -8393245 + (TA)n Simple_repeat Simple_repeat 2 41 0 180 0 0 0 chr17 77045235 77045255 -8393225 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1051 185 40 14 chr17 77045255 77045293 -8393187 - AluJo SINE Alu -175 137 85 788 137 30 23 chr17 77047571 77047702 -8390778 - FLAM_C SINE Alu -1 132 1 1480 138 69 39 chr17 77049882 77050142 -8388338 - AluJo SINE Alu -43 269 2 2415 67 0 0 chr17 77051700 77051998 -8386482 - AluY SINE Alu -13 298 1 644 188 0 114 chr17 77052144 77052293 -8386187 - FLAM_C SINE Alu -1 132 1 2019 117 0 4 chr17 77052559 77052872 -8385608 + AluSx SINE Alu 5 316 0 181 308 42 97 chr17 77052918 77053155 -8385325 - L3 LINE CR1 -1 1576 1353 * 185 354 20 40 chr17 77053060 77053159 -8385321 - MER5A DNA MER1_type -6 183 87 * 221 301 31 86 chr17 77053078 77053214 -8385266 + MER5A DNA MER1_type 33 160 -29 2311 118 48 25 chr17 77053214 77053570 -8384910 + THE1B LTR MaLR 1 364 0 221 301 31 86 chr17 77053570 77053596 -8384884 + MER5A DNA MER1_type 160 186 -3 2150 102 10 0 chr17 77053793 77054086 -8384394 + AluSp SINE Alu 1 296 -17 2149 135 0 0 chr17 77054096 77054408 -8384072 + AluSx SINE Alu 1 312 0 1716 199 0 0 chr17 77054650 77054946 -8383534 + AluJb SINE Alu 1 296 -16 437 232 0 0 chr17 77054976 77055075 -8383405 + LTR62 LTR ERVK 1 99 -620 1804 149 4 0 chr17 77055075 77055356 -8383124 + AluJb SINE Alu 1 282 -30 546 119 16 79 chr17 77055367 77055493 -8382987 + LTR62 LTR ERVK 87 204 -515 2370 80 3 3 chr17 77055818 77056131 -8382349 - AluSq SINE Alu 0 313 1 2039 88 39 3 chr17 77058010 77058294 -8380186 - AluSg SINE Alu -16 294 1 264 178 0 0 chr17 77058672 77058745 -8379735 + (TG)n Simple_repeat Simple_repeat 2 74 0 759 199 0 0 chr17 77058792 77059246 -8379234 + (TG)n Simple_repeat Simple_repeat 1 454 0 669 178 0 0 chr17 77059268 77059491 -8378989 + (TG)n Simple_repeat Simple_repeat 1 223 0 180 345 58 47 chr17 77060494 77060665 -8377815 - L2 LINE L2 -24 3248 3076 2300 101 0 0 chr17 77060759 77061056 -8377424 + AluSq SINE Alu 1 297 -16 2562 40 0 0 chr17 77061056 77061355 -8377125 + AluY SINE Alu 1 299 -12 385 241 121 17 chr17 77063060 77063176 -8375304 - MIR SINE MIR -114 148 21 742 163 0 37 chr17 77064048 77064183 -8374297 + FLAM_A SINE Alu 4 133 0 217 219 0 94 chr17 77067129 77067193 -8371287 - MER5A DNA MER1_type -16 173 116 2022 157 0 0 chr17 77067413 77067725 -8370755 - AluSx SINE Alu 0 312 1 342 235 0 0 chr17 77067728 77067796 -8370684 - MER5A DNA MER1_type -117 72 5 426 68 0 0 chr17 77070391 77070450 -8368030 + Alu SINE Alu 246 304 -6 528 248 69 0 chr17 77070576 77070624 -8367856 - MIR SINE MIR -3 259 216 1766 143 61 4 chr17 77070624 77070904 -8367576 - AluJb SINE Alu -16 296 1 528 248 69 0 chr17 77070904 77071000 -8367480 - MIR SINE MIR -46 216 105 2039 138 0 7 chr17 77071149 77071454 -8367026 - AluSx SINE Alu -9 303 1 318 241 23 0 chr17 77072827 77072914 -8365566 - MER117 DNA MER1_type -107 90 2 1084 155 0 18 chr17 77073749 77073917 -8364563 + AluJb SINE Alu 2 166 -146 1218 121 0 6 chr17 77074017 77074191 -8364289 - AluJo SINE Alu -139 173 1 210 338 36 106 chr17 77074370 77074645 -8363835 + L2 LINE L2 3009 3264 -8 2065 117 0 29 chr17 77076326 77076635 -8361845 - AluSx SINE Alu -12 300 1 185 357 31 39 chr17 77076662 77076791 -8361689 + L2 LINE L2 3145 3272 0 263 311 67 52 chr17 77076999 77077134 -8361346 - MIR SINE MIR -40 222 86 517 103 0 0 chr17 77078630 77078729 -8359751 - AluSg/x SINE Alu 0 314 216 235 256 12 81 chr17 77078898 77078984 -8359496 + MIR SINE MIR 26 105 -157 590 175 20 37 chr17 77078993 77079113 -8359367 + MLT1A1 LTR MaLR 1 152 -213 2243 101 10 0 chr17 77079113 77079419 -8359061 + AluSp SINE Alu 2 310 -3 590 175 20 37 chr17 77079419 77079492 -8358988 + MLT1A1 LTR MaLR 152 225 -140 1773 147 39 3 chr17 77079493 77079779 -8358701 + AluJb SINE Alu 1 296 -16 1975 124 0 39 chr17 77079856 77080162 -8358318 + AluSx SINE Alu 1 294 -18 29 0 0 0 chr17 77080170 77080199 -8358281 + AT_rich Low_complexity Low_complexity 1 29 0 2952 223 44 19 chr17 77080225 77080645 -8357835 - L1MD2 LINE L1 -249 6110 5702 1199 168 62 10 chr17 77080645 77080853 -8357627 + MER20 DNA MER1_type 1 219 0 2952 223 44 19 chr17 77080853 77080895 -8357585 - L1MD2 LINE L1 -657 5702 5663 2927 73 0 16 chr17 77080895 77081276 -8357204 + THE1C LTR MaLR 1 375 0 2952 223 44 19 chr17 77081276 77081766 -8356714 - L1MD2 LINE L1 -696 5663 5128 2198 114 0 0 chr17 77081792 77082090 -8356390 + AluSx SINE Alu 3 300 -12 774 239 17 101 chr17 77082090 77082495 -8355985 - L1MD2 LINE L1 -1157 4989 4619 2333 97 3 0 chr17 77082497 77082807 -8355673 - AluY SINE Alu 0 311 1 268 307 35 68 chr17 77083675 77083834 -8354646 + MIR SINE MIR 44 191 -65 1137 192 13 22 chr17 77084025 77084249 -8354231 + AluJo SINE Alu 1 222 -90 259 151 0 123 chr17 77084249 77084322 -8354158 + AluJb SINE Alu 88 151 -151 692 241 58 5 chr17 77084580 77084787 -8353693 - MER20 DNA MER1_type 0 219 2 300 53 0 0 chr17 77085207 77085245 -8353235 + (CA)n Simple_repeat Simple_repeat 2 39 0 27 29 0 0 chr17 77085707 77085741 -8352739 + AT_rich Low_complexity Low_complexity 1 34 0 2036 135 0 0 chr17 77086579 77086876 -8351604 + AluSx SINE Alu 13 309 -3 359 323 8 27 chr17 77087005 77087179 -8351301 - MER5A DNA MER1_type -5 184 2 225 361 90 8 chr17 77087655 77087788 -8350692 + L2 LINE L2 3125 3268 -4 180 152 0 0 chr17 77088068 77088101 -8350379 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 197 354 0 15 chr17 77088380 77088398 -8350082 + MER5B DNA MER1_type 108 125 -53 655 223 8 0 chr17 77088398 77088528 -8349952 - FLAM_A SINE Alu 0 133 3 197 354 0 15 chr17 77088528 77088574 -8349906 + MER5B DNA MER1_type 125 171 -7 1461 249 104 20 chr17 77088733 77089244 -8349236 + MLT2B3 LTR ERVL 1 554 0 2187 112 0 7 chr17 77089310 77089615 -8348865 - AluSx SINE Alu -9 303 1 826 167 12 6 chr17 77090132 77090294 -8348186 - AluJb SINE Alu -13 299 137 2296 81 3 7 chr17 77090920 77091229 -8347251 - AluSx SINE Alu -4 308 1 2400 69 3 3 chr17 77091977 77092282 -8346198 - AluSp SINE Alu -8 305 1 2749 7 0 0 chr17 77092461 77092766 -8345714 - AluYa5 SINE Alu -6 305 1 2135 116 0 0 chr17 77093430 77093724 -8344756 - AluSx SINE Alu -18 294 1 677 66 0 0 chr17 77094114 77094205 -8344275 + 5S rRNA rRNA 1 91 -30 268 295 0 57 chr17 77094317 77094422 -8344058 + MIR SINE MIR 24 122 -86 384 231 119 62 chr17 77094452 77094514 -8343966 - MIR SINE MIR -23 239 182 1752 159 45 0 chr17 77094514 77094804 -8343676 - AluSx SINE Alu -9 303 1 384 231 119 62 chr17 77094804 77094901 -8343579 - MIR SINE MIR -80 182 71 685 199 53 0 chr17 77094903 77095034 -8343446 - AluJb SINE Alu -174 138 1 1531 144 65 40 chr17 77095038 77095316 -8343164 - AluJo SINE Alu -27 285 1 2051 86 38 17 chr17 77095326 77095617 -8342863 - AluSq SINE Alu -16 297 1 468 218 23 15 chr17 77095682 77095815 -8342665 - MLT1C LTR MaLR -31 511 378 1209 181 80 0 chr17 77095846 77096072 -8342408 + AluJb SINE Alu 68 311 -1 888 217 109 40 chr17 77096109 77096236 -8342244 - MLT1C LTR MaLR -101 366 249 2385 71 0 7 chr17 77096236 77096574 -8341906 - AluY SINE Alu 0 311 1 1816 170 3 0 chr17 77096579 77096868 -8341612 - AluJo SINE Alu -16 296 7 888 217 109 40 chr17 77096868 77097073 -8341407 - MLT1C LTR MaLR -221 246 10 1887 132 0 0 chr17 77097309 77097617 -8340863 - AluSx SINE Alu 0 328 21 1070 143 0 24 chr17 77097623 77097791 -8340689 - FRAM SINE Alu -13 163 1 269 372 0 0 chr17 77098172 77098266 -8340214 + MIR SINE MIR 44 137 -71 1817 132 11 34 chr17 77098433 77098518 -8339962 - MER47A DNA MER2_type -1957 366 281 1485 148 42 42 chr17 77098518 77098617 -8339863 + AluJo SINE Alu 11 109 -203 2038 125 0 7 chr17 77098617 77098912 -8339568 + AluSx SINE Alu 1 293 -19 1485 148 42 42 chr17 77098912 77099095 -8339385 + AluJo SINE Alu 108 293 -19 1817 132 11 34 chr17 77099095 77099358 -8339122 - MER47A DNA MER2_type -2042 281 26 1628 149 14 18 chr17 77099453 77099728 -8338752 + AluJo SINE Alu 2 275 -37 189 0 0 0 chr17 77099737 77099758 -8338722 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2204 106 7 0 chr17 77100260 77100562 -8337918 + AluSq SINE Alu 6 309 -4 875 245 56 76 chr17 77100597 77100993 -8337487 - MLT1C LTR MaLR -27 440 53 395 237 34 34 chr17 77101073 77101191 -8337289 - MLT1H1 LTR MaLR 0 555 438 797 158 30 8 chr17 77101191 77101324 -8337156 - AluJo SINE Alu -70 242 107 375 208 208 40 chr17 77101446 77101619 -8336861 - MLT1H1 LTR MaLR -302 288 87 201 317 61 12 chr17 77101734 77101816 -8336664 - MIR SINE MIR -152 110 25 806 153 0 8 chr17 77101880 77102011 -8336469 + AluJo/FLAM SINE Alu 2 131 -171 1856 140 35 3 chr17 77102011 77102296 -8336184 + AluSx SINE Alu 1 294 -18 2224 114 0 13 chr17 77102298 77102660 -8335820 + AluSx SINE Alu 1 358 0 312 273 99 46 chr17 77102693 77102879 -8335601 + MIR SINE MIR 17 218 -44 521 232 122 45 chr17 77103154 77103397 -8335083 - MLT1F LTR MaLR -17 525 245 1749 176 17 3 chr17 77103397 77103692 -8334788 - AluJb SINE Alu -13 299 1 521 232 122 45 chr17 77103692 77103867 -8334613 - MLT1F LTR MaLR -297 245 85 274 122 4 3 chr17 77104620 77104857 -8333623 + AluSx SINE Alu 2 301 -1 819 238 116 34 chr17 77104883 77105211 -8333269 - MLT1C LTR MaLR -2 465 111 1256 229 3 17 chr17 77105225 77105518 -8332962 - AluJo SINE Alu 0 312 24 1183 192 27 18 chr17 77105649 77105868 -8332612 + MER58A DNA MER1_type 4 224 0 396 205 0 2 chr17 77107380 77107474 -8331006 - MLT1B LTR MaLR -87 287 195 * 504 191 0 0 chr17 77107469 77107563 -8330917 + MLT1B LTR MaLR 52 145 -245 360 148 0 0 chr17 77107897 77107958 -8330522 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 640 154 10 0 chr17 77107958 77108062 -8330418 - AluJb SINE Alu -187 125 21 1875 139 3 17 chr17 77108063 77108357 -8330123 - AluJb SINE Alu -16 296 7 2369 64 0 22 chr17 77108571 77108885 -8329595 - AluSx SINE Alu -5 307 1 1759 148 7 26 chr17 77109354 77109657 -8328823 + AluJo SINE Alu 1 297 -15 386 309 16 16 chr17 77111828 77111951 -8326529 + MIR3 SINE MIR 56 178 -30 1904 120 40 10 chr17 77111967 77112267 -8326213 + AluSx SINE Alu 3 311 -1 823 167 0 0 chr17 77112424 77112550 -8325930 - FLAM_C SINE Alu -3 130 5 2451 87 0 0 chr17 77112569 77112881 -8325599 - AluSq SINE Alu -1 312 1 551 313 31 10 chr17 77112893 77113085 -8325395 - MIR SINE MIR -57 205 10 230 330 78 0 chr17 77113358 77113461 -8325019 - L2 LINE L2 -605 2709 2599 2279 104 3 0 chr17 77113892 77114200 -8324280 - AluSx SINE Alu -3 309 1 189 0 0 0 chr17 77114200 77114221 -8324259 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1965 98 25 4 chr17 77114221 77114495 -8323985 - AluSx SINE Alu -30 282 3 483 210 51 14 chr17 77114744 77114882 -8323598 - MER89 LTR ERV1 -1 558 416 659 202 30 71 chr17 77114883 77115039 -8323441 - MER4C LTR ERV1 -1 464 316 2300 94 0 0 chr17 77115039 77115338 -8323142 + AluSq SINE Alu 1 299 -14 659 202 30 71 chr17 77115338 77115379 -8323101 - MER4C LTR ERV1 -149 316 275 313 317 8 8 chr17 77115400 77115523 -8322957 - LTR34 LTR ERV1 -160 539 417 1693 149 24 7 chr17 77115623 77116092 -8322388 + AluJb SINE Alu 1 474 0 198 0 0 0 chr17 77116091 77116113 -8322367 + (GGGGA)n Simple_repeat Simple_repeat 3 24 0 1301 195 55 74 chr17 77116119 77116232 -8322248 - MER89 LTR ERV1 -147 412 298 2032 151 0 0 chr17 77116232 77116537 -8321943 - AluJb SINE Alu -7 305 1 1301 195 55 74 chr17 77116537 77116843 -8321637 - MER89 LTR ERV1 -261 298 1 365 313 9 0 chr17 77116856 77116968 -8321512 - MIR SINE MIR -109 153 41 182 360 44 53 chr17 77116969 77117083 -8321397 + L2 LINE L2 3160 3272 0 284 291 145 23 chr17 77117623 77117795 -8320685 + MIR3 SINE MIR 9 201 -7 2160 98 0 19 chr17 77118468 77118775 -8319705 - AluSg SINE Alu -9 301 1 381 198 0 0 chr17 77120117 77120198 -8318282 + CT-rich Low_complexity Low_complexity 3 83 0 434 366 69 40 chr17 77120198 77120868 -8317612 - HAL1 LINE L1 -1206 1301 912 1227 160 172 27 chr17 77120868 77121130 -8317350 - AluJb SINE Alu -2 300 1 434 366 69 40 chr17 77121130 77121165 -8317315 - HAL1 LINE L1 -1595 912 880 1383 171 117 4 chr17 77121219 77121628 -8316852 + LTR54 LTR ERV1 1 496 -2 1989 222 79 19 chr17 77121832 77122430 -8316050 + MLT1E2 LTR MaLR 1 626 0 1823 150 3 7 chr17 77122849 77123143 -8315337 + AluJo SINE Alu 1 293 -19 1100 262 65 50 chr17 77123201 77123644 -8314836 + MLT1J2 LTR MaLR 1 450 0 231 154 19 19 chr17 77124026 77124078 -8314402 + GA-rich Low_complexity Low_complexity 4 55 0 2068 108 7 7 chr17 77125806 77126103 -8312377 - AluSc SINE Alu -10 299 3 1994 124 31 3 chr17 77126105 77126396 -8312084 - AluSx SINE Alu -13 299 1 2089 122 10 6 chr17 77127009 77127321 -8311159 - AluSq SINE Alu 0 313 1 1759 146 0 67 chr17 77127323 77127638 -8310842 - AluJb SINE Alu -18 294 1 277 256 62 54 chr17 77127999 77128128 -8310352 + L2 LINE L2 2930 3059 -213 2235 86 7 0 chr17 77128671 77128961 -8309519 - AluSq SINE Alu -21 292 1 404 326 177 16 chr17 77129133 77129455 -8309025 - L1MC4a LINE L1 -1861 5947 5574 407 328 15 0 chr17 77129456 77129590 -8308890 - MER5B DNA MER1_type -37 141 6 328 383 37 0 chr17 77129965 77130127 -8308353 + MER91B DNA MER1_type 21 188 -2 482 143 188 120 chr17 77130406 77130539 -8307941 + FLAM_C SINE Alu 1 142 -1 1536 31 7 0 chr17 77130547 77130836 -8307644 + (GGAA)n Simple_repeat Simple_repeat 1 291 0 889 125 0 22 chr17 77130863 77130999 -8307481 + AluJo/FLAM SINE Alu 1 133 -169 2435 75 3 0 chr17 77131000 77131307 -8307173 + AluSp SINE Alu 1 308 -5 300 350 100 35 chr17 77131776 77131976 -8306504 - MIR SINE MIR -20 242 30 967 183 69 0 chr17 77132155 77132357 -8306123 - AluJb SINE Alu -12 300 85 512 149 0 0 chr17 77132357 77132431 -8306049 - AluSc SINE Alu -61 248 175 28 48 0 0 chr17 77132509 77132551 -8305929 + AT_rich Low_complexity Low_complexity 1 42 0 1676 186 14 0 chr17 77132558 77132854 -8305626 + AluJo SINE Alu 1 300 -12 670 118 0 0 chr17 77132861 77132999 -8305481 - AluSg/x SINE Alu 0 348 211 2181 110 13 0 chr17 77134377 77134686 -8303794 - AluSq SINE Alu 0 313 1 454 299 6 48 chr17 77134689 77134856 -8303624 - MIR SINE MIR -66 196 37 2055 117 0 35 chr17 77135323 77135639 -8302841 - AluSx SINE Alu -7 305 1 511 257 13 53 chr17 77136614 77136766 -8301714 - L2 LINE L2 -3 3310 3165 207 0 0 0 chr17 77138917 77138940 -8299540 + (TG)n Simple_repeat Simple_repeat 2 24 0 1068 144 23 0 chr17 77139570 77139744 -8298736 - FRAM SINE Alu -5 171 1 228 406 75 0 chr17 77139786 77139892 -8298588 + MER5B DNA MER1_type 63 176 -2 2401 82 0 0 chr17 77140092 77140395 -8298085 - AluY SINE Alu -8 303 1 493 216 23 6 chr17 77140424 77140595 -8297885 + (TG)n Simple_repeat Simple_repeat 2 175 0 2167 114 0 0 chr17 77140665 77140963 -8297517 - AluSx SINE Alu -14 298 1 358 275 114 20 chr17 77143894 77144043 -8294437 + MIR SINE MIR 35 197 -65 1719 153 13 35 chr17 77146460 77146773 -8291707 - AluSx SINE Alu -6 306 1 494 275 155 7 chr17 77146790 77147010 -8291470 - MIR SINE MIR 0 262 7 279 222 0 0 chr17 77147805 77147859 -8290621 - MER91B DNA MER1_type -2 188 135 2362 84 0 0 chr17 77147875 77148172 -8290308 + AluSx SINE Alu 1 297 -15 274 323 158 15 chr17 77148198 77148331 -8290149 - MER91B DNA MER1_type -37 153 2 290 319 58 22 chr17 77148433 77148571 -8289909 - MIR SINE MIR -89 173 31 405 310 125 16 chr17 77149542 77149726 -8288754 + MIR SINE MIR 19 222 -40 197 293 0 0 chr17 77150358 77150416 -8288064 + MIR SINE MIR 57 114 -148 2177 116 0 0 chr17 77150418 77150719 -8287761 - AluSx SINE Alu -11 301 1 512 298 62 45 chr17 77150807 77151049 -8287431 + MIR SINE MIR 17 262 0 919 144 43 43 chr17 77151218 77151406 -8287074 - MER53 DNA DNA 0 189 2 186 264 75 0 chr17 77154038 77154091 -8284389 + MIR SINE MIR 47 103 -159 360 271 83 21 chr17 77154567 77154711 -8283769 + MIR SINE MIR 3 155 -107 461 314 47 47 chr17 77156564 77156631 -8281849 - MIR SINE MIR 0 262 196 1943 107 62 0 chr17 77156631 77156921 -8281559 - AluSx SINE Alu -4 308 1 461 314 47 47 chr17 77156921 77157111 -8281369 - MIR SINE MIR -65 197 5 288 347 88 6 chr17 77157789 77157959 -8280521 + MIR SINE MIR 63 246 -16 271 299 84 9 chr17 77158628 77158735 -8279745 - MIR SINE MIR -146 116 2 274 261 102 23 chr17 77160299 77160387 -8278093 - L2 LINE L2 -188 3084 2990 202 296 0 0 chr17 77160704 77160748 -8277732 + L2 LINE L2 3224 3267 -5 * 336 304 110 34 chr17 77160742 77160839 -8277641 - MIR SINE MIR 0 262 174 2326 91 0 25 chr17 77160839 77161157 -8277323 + AluSx SINE Alu 2 311 -1 336 304 110 34 chr17 77161157 77161296 -8277184 - MIR SINE MIR -88 174 8 1472 204 27 80 chr17 77161349 77161613 -8276867 + MLT1B LTR MaLR 1 237 -153 1878 139 35 0 chr17 77161613 77161901 -8276579 + AluSx SINE Alu 1 298 -14 1472 204 27 80 chr17 77161901 77162048 -8276432 + MLT1B LTR MaLR 237 390 0 1161 119 135 0 chr17 77162653 77162846 -8275634 - MER20 DNA MER1_type 0 219 1 237 278 14 28 chr17 77162932 77163004 -8275476 + MIR SINE MIR 79 149 -59 192 40 0 0 chr17 77163207 77163232 -8275248 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 373 290 66 44 chr17 77163525 77163708 -8274772 + MER5A DNA MER1_type 3 189 0 441 203 42 0 chr17 77163716 77163834 -8274646 + L1MB8 LINE L1 5706 5828 -356 1523 160 130 7 chr17 77163840 77164109 -8274371 + AluJo SINE Alu 1 302 0 1670 126 36 0 chr17 77164321 77164598 -8273882 + AluSx SINE Alu 17 303 -9 466 201 36 2 chr17 77164600 77164717 -8273763 + L1MB8 LINE L1 5896 6017 -185 415 296 41 56 chr17 77164976 77165172 -8273308 - MIR SINE MIR -62 200 8 561 15 0 0 chr17 77165714 77165780 -8272700 + (CA)n Simple_repeat Simple_repeat 2 67 0 191 299 134 52 chr17 77165910 77166007 -8272473 - MIR SINE MIR -11 251 147 2197 114 0 0 chr17 77166083 77166381 -8272099 + AluSx SINE Alu 1 298 -14 480 279 121 16 chr17 77167551 77167741 -8270739 - MIR SINE MIR -2 260 51 430 336 90 50 chr17 77168239 77168482 -8269998 + L2 LINE L2 2773 3005 -308 1969 101 0 7 chr17 77168482 77168759 -8269721 - AluSc SINE Alu 0 309 35 430 336 90 50 chr17 77168759 77169029 -8269451 + L2 LINE L2 3005 3302 -11 2046 100 32 0 chr17 77170188 77170491 -8267989 + AluSg SINE Alu 1 312 0 31 68 0 0 chr17 77171769 77171828 -8266652 + GC_rich Low_complexity Low_complexity 1 59 0 276 296 0 23 chr17 77172479 77172567 -8265913 + MIR SINE MIR 43 128 -80 2094 111 19 0 chr17 77173377 77173684 -8264796 - AluSq SINE Alu 0 313 1 454 299 6 48 chr17 77173687 77173854 -8264626 - MIR SINE MIR -66 196 37 243 247 45 117 chr17 77174276 77174320 -8264160 + MER5B DNA MER1_type 1 47 -131 2144 114 0 13 chr17 77174320 77174627 -8263853 - AluSx SINE Alu -7 305 3 243 247 45 117 chr17 77174627 77174736 -8263744 + MER5B DNA MER1_type 47 143 -35 221 354 24 0 chr17 77174772 77174854 -8263626 - MIR3 SINE MIR -48 160 77 266 153 28 118 chr17 77175064 77175095 -8263385 + MER53 DNA DNA 8 40 -149 1653 151 20 14 chr17 77175095 77175387 -8263093 + AluSx SINE Alu 1 294 -18 266 153 28 118 chr17 77175387 77175499 -8262981 + MER53 DNA DNA 40 138 -51 2012 129 10 0 chr17 77175516 77175810 -8262670 - AluSq SINE Alu -16 297 1 1900 129 0 4 chr17 77176236 77176515 -8261965 - AluJo SINE Alu -14 298 21 1673 101 13 0 chr17 77176556 77176793 -8261687 + AluSx SINE Alu 62 301 -11 180 250 19 19 chr17 77176834 77176886 -8261594 + L3b LINE CR1 1359 1410 -173 210 257 9 119 chr17 77177307 77177416 -8261064 + MER5B DNA MER1_type 13 109 -69 320 319 21 0 chr17 77178045 77178139 -8260341 + MIR3 SINE MIR 65 160 -48 183 80 0 0 chr17 77178201 77178226 -8260254 + (TATTG)n Simple_repeat Simple_repeat 2 26 0 2044 142 0 7 chr17 77178235 77178545 -8259935 - AluSx SINE Alu -4 308 1 27 0 0 0 chr17 77178545 77178572 -8259908 + AT_rich Low_complexity Low_complexity 1 27 0 1921 155 3 0 chr17 77178575 77178879 -8259601 - AluJo SINE Alu -7 305 1 2328 100 3 0 chr17 77179037 77179347 -8259133 + AluSp SINE Alu 1 311 -2 286 327 52 1 chr17 77179975 77180098 -8258382 + MIR SINE MIR 35 164 -60 299 246 51 56 chr17 77180369 77180532 -8257948 + MIR3 SINE MIR 17 181 -27 787 211 29 34 chr17 77180691 77180866 -8257614 - MER45A DNA AcHobo 0 178 5 194 303 30 15 chr17 77181111 77181177 -8257303 - MIR3 SINE MIR -135 73 7 257 287 150 24 chr17 77181489 77181656 -8256824 - MIR SINE MIR -74 188 1 240 292 0 0 chr17 77181834 77181906 -8256574 + GA-rich Low_complexity Low_complexity 3 74 0 339 345 55 23 chr17 77182588 77182808 -8255672 - MIR SINE MIR -26 236 10 745 99 0 120 chr17 77183064 77183206 -8255274 + FLAM_C SINE Alu 12 136 -7 1897 146 10 0 chr17 77183228 77183522 -8254958 + AluJb SINE Alu 1 297 -15 2071 123 7 7 chr17 77183523 77183832 -8254648 + AluSq SINE Alu 1 309 -4 326 331 50 0 chr17 77183944 77184083 -8254397 - MIR SINE MIR -75 187 42 590 185 137 0 chr17 77184253 77184399 -8254081 + MER20 DNA MER1_type 1 166 -53 725 171 8 0 chr17 77185299 77185416 -8253064 + FLAM_C SINE Alu 1 118 -15 222 118 0 0 chr17 77185417 77185451 -8253029 + (TA)n Simple_repeat Simple_repeat 1 34 0 2261 95 3 0 chr17 77185452 77185748 -8252732 - AluSq SINE Alu -16 297 1 271 383 38 31 chr17 77185959 77186220 -8252260 - L2 LINE L2 -46 3267 3005 210 288 68 42 chr17 77186289 77186407 -8252073 - L2 LINE L2 -296 2976 2856 185 309 32 21 chr17 77186531 77186625 -8251855 - L2 LINE L2 -649 2665 2571 2198 104 3 0 chr17 77187162 77187460 -8251020 + AluSx SINE Alu 1 299 -13 220 338 175 26 chr17 77187639 77187793 -8250687 + MIR SINE MIR 80 256 -6 426 121 0 0 chr17 77187824 77187890 -8250590 + (TC)n Simple_repeat Simple_repeat 1 66 0 1526 195 9 28 chr17 77187890 77188069 -8250411 - AluJo SINE Alu 0 312 140 180 0 0 0 chr17 77188069 77188089 -8250391 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1526 195 9 28 chr17 77188089 77188227 -8250253 - AluJo SINE Alu -172 140 1 1729 154 3 14 chr17 77188408 77188700 -8249780 + AluSx SINE Alu 1 289 -23 1775 145 4 11 chr17 77188767 77189043 -8249437 + AluSx SINE Alu 1 274 -38 722 292 98 64 chr17 77189110 77189623 -8248857 - MLT1K LTR MaLR 0 588 59 249 376 99 19 chr17 77190175 77190500 -8247980 - L2 LINE L2 -262 3010 2610 2294 113 0 0 chr17 77190500 77190811 -8247669 + AluSx SINE Alu 1 311 -1 249 376 99 19 chr17 77190811 77190986 -8247494 - L2 LINE L2 -662 2610 2450 2438 64 0 3 chr17 77191009 77191321 -8247159 + AluY SINE Alu 1 311 0 1876 131 7 0 chr17 77191442 77191754 -8246726 - AluSx SINE Alu 0 314 1 621 214 136 0 chr17 77191789 77191929 -8246551 + AluJo SINE Alu 1 159 -153 524 111 14 0 chr17 77192032 77192104 -8246376 - AluJ/FLAM SINE Alu -233 79 7 209 294 29 15 chr17 77192518 77192586 -8245894 + MIR SINE MIR 47 115 -147 2035 122 0 3 chr17 77193086 77193374 -8245106 + AluSx SINE Alu 1 287 -25 1670 76 8 17 chr17 77193428 77193666 -8244814 - L1MA2 LINE L1 0 6304 6069 742 93 157 14 chr17 77193666 77193723 -8244757 - L1MA2 LINE L1 -80 6224 6176 2465 65 0 0 chr17 77193723 77194029 -8244451 - AluY SINE Alu -5 306 1 742 93 157 14 chr17 77194029 77194111 -8244369 - L1MA2 LINE L1 -128 6176 6065 1059 153 17 0 chr17 77194111 77194287 -8244193 - AluSg/x SINE Alu 0 310 132 446 167 0 0 chr17 77194294 77194378 -8244102 + L1M4 LINE L1 5193 5276 -870 1802 146 4 4 chr17 77194474 77194754 -8243726 - AluJb SINE Alu -19 293 14 293 209 100 82 chr17 77194754 77194864 -8243616 - MIR SINE MIR -120 142 31 532 226 113 54 chr17 77194864 77195032 -8243448 + MER5B DNA MER1_type 1 178 0 345 271 36 36 chr17 77195050 77195190 -8243290 + MER5A DNA MER1_type 18 157 -32 2304 90 7 0 chr17 77195500 77195810 -8242670 - AluSx SINE Alu 0 312 1 952 181 12 0 chr17 77197004 77197175 -8241305 - AluSg/x SINE Alu -6 304 132 1973 131 3 7 chr17 77197175 77197472 -8241008 - AluSx SINE Alu -16 296 1 2553 27 0 0 chr17 77199152 77199445 -8239035 - AluY SINE Alu -17 294 2 451 328 29 23 chr17 77199573 77199747 -8238733 + MIR SINE MIR 18 192 -70 484 149 58 0 chr17 77201042 77201129 -8237351 - L1MB3 LINE L1 0 6183 6092 867 169 47 0 chr17 77201129 77201277 -8237203 - AluJo SINE Alu -11 291 137 829 106 38 8 chr17 77201277 77201303 -8237177 - AluJo SINE Alu -176 136 112 2719 179 25 8 chr17 77201303 77201779 -8236701 + MER66B LTR ERV1 3 486 0 829 106 38 8 chr17 77201779 77201884 -8236596 - AluJo SINE Alu -200 112 1 1731 171 0 13 chr17 77201896 77202195 -8236285 - AluJb SINE Alu -17 295 1 358 152 76 0 chr17 77202195 77202261 -8236219 - L1MC3 LINE L1 -657 7128 7058 2311 73 0 3 chr17 77202696 77202997 -8235483 - AluSx SINE Alu -8 304 5 1839 165 3 0 chr17 77203315 77203618 -8234862 - AluSx SINE Alu -8 304 1 1766 159 33 0 chr17 77203621 77203923 -8234557 - AluJb SINE Alu 0 312 1 1642 153 10 10 chr17 77204518 77204813 -8233667 - AluSg SINE Alu -15 295 1 446 162 0 0 chr17 77205287 77205361 -8233119 - Alu SINE Alu -1 309 236 256 139 0 0 chr17 77205361 77205397 -8233083 - LTR12 LTR ERV1 -198 516 481 235 300 11 0 chr17 77205398 77205488 -8232992 - LTR30 LTR ERV1 -79 643 553 952 151 44 139 chr17 77205492 77205844 -8232636 - LTR12 LTR ERV1 -432 1712 54 269 231 0 0 chr17 77205844 77205896 -8232584 - LTR30 LTR ERV1 -670 52 1 1186 85 0 0 chr17 77205896 77206049 -8232431 - AluSq SINE Alu -160 153 1 311 250 13 0 chr17 77206151 77206227 -8232253 - HERVL LTR ERVL -1061 4593 4517 1262 148 134 53 chr17 77206227 77206511 -8231969 - AluJb SINE Alu -5 307 1 336 297 70 43 chr17 77206587 77206772 -8231708 + L1ME4a LINE L1 5930 6119 -2 1723 152 16 32 chr17 77206780 77207096 -8231384 + AluJb SINE Alu 1 311 -1 239 130 0 22 chr17 77207116 77207162 -8231318 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 386 147 39 192 chr17 77207377 77207484 -8230996 - MER58 DNA MER1_type 0 2420 2298 804 164 8 0 chr17 77207484 77207612 -8230868 - FLAM_C SINE Alu -3 130 2 386 147 39 192 chr17 77207612 77207654 -8230826 - MER58 DNA MER1_type -117 2303 2294 2102 119 3 0 chr17 77207654 77207956 -8230524 - AluSx SINE Alu -9 303 1 1700 144 16 26 chr17 77208532 77208837 -8229643 - AluSx SINE Alu -10 302 1 577 281 51 30 chr17 77208998 77209233 -8229247 - MIR SINE MIR -2 260 21 326 319 132 11 chr17 77209693 77209875 -8228605 - MIR SINE MIR -40 222 19 265 319 58 22 chr17 77210844 77210982 -8227498 + MIR SINE MIR 31 173 -89 2033 128 0 3 chr17 77211238 77211536 -8226944 - AluSx SINE Alu -15 297 1 896 250 66 48 chr17 77211542 77211982 -8226498 - HAL1 LINE L1 -1024 1483 1036 331 318 74 42 chr17 77212004 77212193 -8226287 - HAL1 LINE L1 -1447 1060 866 479 268 159 11 chr17 77212920 77213140 -8225340 + MIR SINE MIR 7 262 0 1684 153 13 35 chr17 77213157 77213470 -8225010 + AluSx SINE Alu 1 306 -6 284 246 109 27 chr17 77216316 77216426 -8222054 - MIR SINE MIR -78 184 66 1409 148 167 8 chr17 77216618 77216875 -8221605 + AluSg SINE Alu 3 300 0 251 268 21 62 chr17 77217243 77217340 -8221140 + MIR SINE MIR 102 194 -68 2141 110 0 7 chr17 77217898 77218208 -8220272 - AluSc SINE Alu -1 308 1 734 191 76 12 chr17 77219014 77219059 -8219421 + L1M3 LINE L1 5563 5604 -579 2040 75 75 0 chr17 77219059 77219341 -8219139 + AluSp SINE Alu 5 307 -6 734 191 76 12 chr17 77219341 77219550 -8218930 + L1M3 LINE L1 5604 5822 -361 1549 167 39 4 chr17 77219558 77219839 -8218641 + AluJo SINE Alu 3 293 -19 937 82 0 15 chr17 77219844 77219978 -8218502 + AluYb8 SINE Alu 1 132 -186 665 210 28 0 chr17 77220799 77220942 -8217538 - MIR SINE MIR -95 167 21 389 225 72 0 chr17 77221647 77221758 -8216722 - MER5A DNA MER1_type -62 127 9 258 136 0 0 chr17 77223046 77223090 -8215390 + (TG)n Simple_repeat Simple_repeat 1 44 0 564 160 45 8 chr17 77223133 77223381 -8215099 + (TG)n Simple_repeat Simple_repeat 1 257 0 497 304 84 52 chr17 77223439 77223902 -8214578 + L2 LINE L2 2424 2901 -413 222 194 0 0 chr17 77223978 77224014 -8214466 + L2 LINE L2 3222 3257 -15 320 122 0 0 chr17 77224996 77225045 -8213435 - Alu SINE Alu -252 49 1 357 280 111 31 chr17 77225994 77226219 -8212261 + L2 LINE L2 2812 3054 -218 2250 95 0 16 chr17 77226248 77226564 -8211916 - AluY SINE Alu 0 311 1 1074 242 189 0 chr17 77226729 77227285 -8211195 - LTR50 LTR ERVL 0 795 34 2039 145 3 0 chr17 77227285 77227621 -8210859 + AluSx SINE Alu 1 337 0 289 200 0 0 chr17 77227621 77227671 -8210809 - LTR50 LTR ERVL -745 50 1 836 274 13 22 chr17 77228235 77228465 -8210015 - ERVL LTR ERVL -723 5041 4814 879 134 0 0 chr17 77228465 77228592 -8209888 + FLAM_C SINE Alu 1 127 -16 834 317 34 0 chr17 77228601 77228863 -8209617 - ERVL LTR ERVL -938 4826 4556 944 173 6 12 chr17 77228863 77229031 -8209449 - AluJb SINE Alu -5 307 141 599 207 17 0 chr17 77229133 77229249 -8209231 + AluJb SINE Alu 160 277 -35 1093 127 61 5 chr17 77229331 77229528 -8208952 - Tigger4(Zombi) DNA MER2_type -1 2730 2523 465 129 14 0 chr17 77229529 77229599 -8208881 - Tigger4(Zombi) DNA MER2_type -2613 118 48 2095 103 0 10 chr17 77229601 77229893 -8208587 + AluSx SINE Alu 1 289 -23 387 278 56 0 chr17 77230513 77230621 -8207859 - MER58 DNA MER1_type -2306 114 1 1958 120 7 7 chr17 77230639 77230953 -8207527 - AluSx SINE Alu 0 315 2 660 150 30 98 chr17 77230957 77231090 -8207390 - FLAM_C SINE Alu -7 126 3 2091 98 7 0 chr17 77231812 77232126 -8206354 + AluSx SINE Alu 1 312 0 374 284 81 8 chr17 77234577 77234743 -8203737 + MIR SINE MIR 11 191 -65 258 274 12 12 chr17 77234771 77234855 -8203625 - MER5B DNA MER1_type 0 178 95 250 245 214 69 chr17 77235118 77235186 -8203294 + MER5A DNA MER1_type 4 61 -128 2068 105 7 3 chr17 77235186 77235482 -8202998 + AluSq SINE Alu 1 297 -16 250 245 214 69 chr17 77235482 77235572 -8202908 + MER5A DNA MER1_type 61 185 -4 2145 107 3 0 chr17 77235575 77235866 -8202614 - AluSx SINE Alu -8 304 13 215 347 22 23 chr17 77235924 77236056 -8202424 - MER5B DNA MER1_type -43 146 1 1951 160 0 0 chr17 77236801 77237107 -8201373 + AluSx SINE Alu 1 306 -6 341 129 32 0 chr17 77237294 77237356 -8201124 + MER20 DNA MER1_type 105 168 -51 411 178 17 93 chr17 77237396 77237514 -8200966 - MER20 DNA MER1_type -102 117 9 2049 112 51 0 chr17 77238015 77238311 -8200169 + AluSx SINE Alu 1 311 -1 604 286 50 25 chr17 77238366 77238607 -8199873 - MIR SINE MIR 0 262 16 2612 198 91 40 chr17 77238924 77239285 -8199195 + MER67C LTR ERV1 5 346 -364 2108 104 27 0 chr17 77239285 77239584 -8198896 + AluSx SINE Alu 1 307 -5 2612 198 91 40 chr17 77239584 77239894 -8198586 + MER67C LTR ERV1 346 710 0 381 324 0 0 chr17 77240335 77240477 -8198003 + C-rich Low_complexity Low_complexity 1 142 0 198 294 29 15 chr17 77240897 77240965 -8197515 + MIR SINE MIR 47 115 -147 2035 122 0 3 chr17 77241465 77241753 -8196727 + AluSx SINE Alu 1 287 -25 1670 76 8 17 chr17 77241807 77242045 -8196435 - L1MA2 LINE L1 0 6304 6069 742 93 157 14 chr17 77242045 77242102 -8196378 - L1MA2 LINE L1 -80 6224 6176 2465 65 0 0 chr17 77242102 77242408 -8196072 - AluY SINE Alu -5 306 1 742 93 157 14 chr17 77242408 77242490 -8195990 - L1MA2 LINE L1 -128 6176 6065 1059 153 17 0 chr17 77242490 77242666 -8195814 - AluSg/x SINE Alu 0 310 132 446 167 0 0 chr17 77242673 77242757 -8195723 + L1M4 LINE L1 5193 5276 -870 1301 99 12 70 chr17 77242830 77242853 -8195627 + THE1B LTR MaLR 137 160 -204 1865 151 3 3 chr17 77242853 77243145 -8195335 - AluJb SINE Alu -19 293 2 1301 99 12 70 chr17 77243145 77243363 -8195117 + THE1B LTR MaLR 160 364 0 576 348 73 0 chr17 77243571 77243804 -8194676 - MIR SINE MIR 0 262 13 399 21 0 0 chr17 77245144 77245192 -8193288 + (CA)n Simple_repeat Simple_repeat 2 49 0 378 239 64 0 chr17 77245789 77245898 -8192582 + MIR3 SINE MIR 87 202 -6 888 221 39 15 chr17 77246915 77247119 -8191361 + MER3 DNA MER1_type 1 209 0 2095 116 3 0 chr17 77247353 77247655 -8190825 + AluSx SINE Alu 1 303 -9 306 283 62 3 chr17 77247872 77248005 -8190475 + MIR3 SINE MIR 69 154 -54 202 176 0 0 chr17 77248686 77248720 -8189760 - MIR3 SINE MIR -21 187 154 408 40 0 0 chr17 77248743 77248793 -8189687 + (CA)n Simple_repeat Simple_repeat 2 51 0 756 133 33 8 chr17 77248793 77248903 -8189577 - AluJo SINE Alu -182 130 15 2031 113 3 0 chr17 77249601 77249885 -8188595 - AluSx SINE Alu -15 297 13 744 136 0 23 chr17 77250538 77250670 -8187810 + Alu SINE Alu 182 310 0 1168 143 147 25 chr17 77250670 77250949 -8187531 + L1MB3 LINE L1 5815 6127 -56 1110 196 136 0 chr17 77250950 77251185 -8187295 - AluJo SINE Alu -43 269 3 1895 139 11 0 chr17 77251342 77251629 -8186851 - AluSx SINE Alu -20 292 3 578 226 176 40 chr17 77252293 77252385 -8186095 + Tigger5 DNA MER2_type 13 91 -327 1850 108 68 0 chr17 77252385 77252663 -8185817 + AluSx SINE Alu 1 297 -15 578 226 176 40 chr17 77252663 77252769 -8185711 + Tigger5 DNA MER2_type 91 238 -180 395 193 24 12 chr17 77252759 77252842 -8185638 + Tigger5 DNA MER2_type 2085 2168 -155 * 233 247 0 72 chr17 77253866 77253963 -8184517 + C-rich Low_complexity Low_complexity 3 92 0 755 125 0 76 chr17 77254282 77254426 -8184054 + AluJo SINE Alu 2 134 -178 864 103 0 52 chr17 77255526 77255662 -8182818 - FLAM_C SINE Alu 0 133 5 306 190 35 0 chr17 77255867 77255925 -8182555 + L2 LINE L2 3252 3311 -2 215 289 70 52 chr17 77256986 77257256 -8181224 - L2 LINE L2 -179 3093 2819 241 189 19 0 chr17 77257401 77257454 -8181026 + (TG)n Simple_repeat Simple_repeat 1 54 0 945 144 0 0 chr17 77257896 77258042 -8180438 - AluJb SINE Alu -11 301 156 846 145 8 0 chr17 77258055 77258261 -8180219 - FLAM_C SINE Alu 0 207 1 510 236 93 83 chr17 77258427 77258643 -8179837 - MER20 DNA MER1_type 0 219 2 326 314 19 0 chr17 77261943 77262048 -8176432 - MIR SINE MIR -72 136 30 678 209 60 28 chr17 77262117 77262299 -8176181 - MER5A DNA MER1_type 0 189 2 476 129 0 0 chr17 77262543 77262613 -8175867 + FLAM_A SINE Alu 56 125 -17 2046 98 16 20 chr17 77263646 77263951 -8174529 + AluSx SINE Alu 1 304 -8 182 244 22 0 chr17 77265077 77265122 -8173358 - L2 LINE L2 0 3272 3227 202 233 23 81 chr17 77265402 77265488 -8172992 - L3 LINE CR1 -34 1543 1463 1984 123 0 29 chr17 77265907 77266215 -8172265 - AluSq SINE Alu -12 301 3 1078 207 47 116 chr17 77266540 77266647 -8171833 + MLT1C LTR MaLR 60 173 -294 1961 118 16 16 chr17 77266647 77266951 -8171529 + AluSx SINE Alu 1 304 -8 1078 207 47 116 chr17 77266951 77267273 -8171207 + MLT1C LTR MaLR 173 459 -8 208 273 18 0 chr17 77267539 77267594 -8170886 - MIR SINE MIR -130 132 77 223 327 28 28 chr17 77267897 77268004 -8170476 - L3 LINE CR1 -349 1228 1122 1958 149 0 0 chr17 77270732 77271033 -8167447 + AluSx SINE Alu 1 301 -11 278 274 48 0 chr17 77271277 77271361 -8167119 - MER5C DNA MER1_type 0 324 237 296 274 12 12 chr17 77271362 77271446 -8167034 - L1MB7 LINE L1 -16 6168 6085 25 31 0 0 chr17 77271565 77271597 -8166883 + GC_rich Low_complexity Low_complexity 1 32 0 350 155 14 14 chr17 77271615 77271686 -8166794 + AluJ/FRAM SINE Alu 232 302 0 213 359 103 22 chr17 77271708 77271836 -8166644 + MIR SINE MIR 1 150 -112 2096 116 3 0 chr17 77271836 77272138 -8166342 - AluSx SINE Alu -9 303 1 213 359 103 22 chr17 77272138 77272193 -8166287 + MIR SINE MIR 150 199 -63 1719 175 14 0 chr17 77272894 77273180 -8165300 - AluJb SINE Alu -21 291 2 243 0 0 0 chr17 77273629 77273656 -8164824 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 612 205 43 54 chr17 77273713 77273898 -8164582 + L1MB5 LINE L1 5992 6174 0 1478 164 39 58 chr17 77273905 77274245 -8164235 + AluJo SINE Alu 1 312 0 1393 158 0 67 chr17 77274245 77274435 -8164045 + AluJb SINE Alu 45 211 -101 2178 106 0 3 chr17 77274435 77274736 -8163744 + AluSq SINE Alu 1 300 -13 1393 158 0 67 chr17 77274736 77274830 -8163650 + AluJb SINE Alu 211 310 -2 2311 81 3 0 chr17 77274983 77275291 -8163189 - AluY SINE Alu -2 309 1 192 283 0 0 chr17 77276070 77276123 -8162357 - L2 LINE L2 0 3313 3261 23 78 0 0 chr17 77276171 77276222 -8162258 + AT_rich Low_complexity Low_complexity 1 51 0 243 0 0 0 chr17 77276549 77276576 -8161904 + (GA)n Simple_repeat Simple_repeat 2 28 0 1824 149 7 0 chr17 77276592 77276925 -8161555 + AluSx SINE Alu 1 335 0 447 197 129 77 chr17 77276942 77277012 -8161468 - MER106B DNA MER1_type -2 1057 992 2004 108 7 14 chr17 77277012 77277308 -8161172 - AluSx SINE Alu -18 294 1 447 197 129 77 chr17 77277308 77277415 -8161065 - MER106B DNA MER1_type -67 992 44 180 0 0 0 chr17 77278084 77278104 -8160376 + (TG)n Simple_repeat Simple_repeat 1 20 0 673 225 28 92 chr17 77278120 77278255 -8160225 + L1MC4a LINE L1 5691 5804 -2004 2305 88 0 0 chr17 77278255 77278550 -8159930 + AluSx SINE Alu 3 297 -15 673 225 28 92 chr17 77278550 77278663 -8159817 + L1MC4a LINE L1 5804 5923 -1885 1860 161 24 9 chr17 77278670 77279005 -8159475 + MER47A DNA MER2_type 27 366 0 219 218 0 0 chr17 77279007 77279062 -8159418 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 574 179 0 18 chr17 77279084 77279196 -8159284 + MLT1C LTR MaLR 357 466 -1 1977 121 28 0 chr17 77279821 77280111 -8158369 + AluSx SINE Alu 1 298 -14 2088 116 0 0 chr17 77280609 77280893 -8157587 + AluSx SINE Alu 1 284 -28 2182 109 0 10 chr17 77281724 77282036 -8156444 - AluSq SINE Alu -4 309 1 996 230 52 23 chr17 77282370 77282440 -8156040 - L1M4 LINE L1 -2492 3654 3588 2006 128 0 3 chr17 77282440 77282737 -8155743 - AluSx SINE Alu -16 296 1 996 230 52 23 chr17 77282737 77282975 -8155505 - L1M4 LINE L1 -2558 3588 3337 1858 150 29 13 chr17 77282977 77283284 -8155196 - AluJb SINE Alu 0 312 1 1606 204 16 39 chr17 77283286 77283401 -8155079 - L1M4 LINE L1 -3372 2774 2658 2387 56 0 13 chr17 77283401 77283705 -8154775 - AluY SINE Alu -11 300 1 1606 204 16 39 chr17 77283705 77284025 -8154455 - L1M4 LINE L1 -3488 2658 2349 1152 136 12 0 chr17 77284176 77284345 -8154135 + FRAM SINE Alu 1 165 -11 2082 123 0 19 chr17 77284809 77285119 -8153361 + AluSx SINE Alu 1 304 -8 1777 166 0 26 chr17 77285536 77285843 -8152637 + AluJb SINE Alu 1 299 -13 22 35 0 0 chr17 77286710 77286739 -8151741 + AT_rich Low_complexity Low_complexity 1 29 0 394 89 18 0 chr17 77286739 77286795 -8151685 - MER66B LTR ERV1 -135 351 295 2284 80 6 10 chr17 77286814 77287126 -8151354 - AluSx SINE Alu -1 311 1 996 230 52 23 chr17 77287460 77287530 -8150950 - L1M4 LINE L1 -2492 4152 4086 2006 128 0 3 chr17 77287530 77287827 -8150653 - AluSx SINE Alu -16 296 1 996 230 52 23 chr17 77287827 77288065 -8150415 - L1M4 LINE L1 -2558 4086 3835 1858 150 29 13 chr17 77288067 77288374 -8150106 - AluJb SINE Alu 0 312 1 2038 207 32 30 chr17 77288376 77288491 -8149989 - L1M4 LINE L1 -3372 3272 3159 2372 59 0 13 chr17 77288491 77288795 -8149685 - AluY SINE Alu -11 300 1 2038 207 32 30 chr17 77288795 77289216 -8149264 - L1M4 LINE L1 -3485 3159 2735 1221 124 0 0 chr17 77289218 77289396 -8149084 + AluSg/x SINE Alu 135 312 0 1952 121 11 4 chr17 77289442 77289743 -8148737 - AluSx SINE Alu 0 303 1 569 185 95 0 chr17 77289750 77289959 -8148521 - L1M4 LINE L1 -3929 2715 2488 2034 128 3 22 chr17 77289959 77290272 -8148208 - AluJo SINE Alu -1 311 5 4400 184 49 56 chr17 77290287 77290777 -8147703 - L1M4 LINE L1 -4832 1710 1218 1712 155 3 24 chr17 77290777 77291074 -8147406 + AluSq SINE Alu 5 295 -18 4400 184 49 56 chr17 77291074 77291821 -8146659 - L1M4 LINE L1 -5324 1218 549 738 252 0 0 chr17 77291854 77291985 -8146495 + FLAM_C SINE Alu 2 132 -1 445 131 24 0 chr17 77291985 77292069 -8146411 + GA-rich Low_complexity Low_complexity 1 86 0 575 150 120 0 chr17 77292079 77292179 -8146301 - FLAM_C SINE Alu -31 112 1 2098 226 42 22 chr17 77292179 77292724 -8145756 - L1M4 LINE L1 -5979 563 8 1233 92 0 0 chr17 77292744 77292908 -8145572 - AluY SINE Alu -9 302 139 980 209 77 8 chr17 77293167 77293402 -8145078 - AluSg SINE Alu -59 251 1 997 139 17 39 chr17 77293989 77294169 -8144311 + AluSg/x SINE Alu 119 294 -15 3443 157 23 43 chr17 77294174 77294419 -8144061 - L1MC1 LINE L1 -18 6315 6067 744 118 30 44 chr17 77294419 77294554 -8143926 + FLAM_C SINE Alu 1 133 0 3443 157 23 43 chr17 77294554 77294660 -8143820 - L1MC1 LINE L1 -266 6067 5960 2313 92 3 0 chr17 77294660 77294965 -8143515 - AluSq SINE Alu -7 306 1 3443 157 23 43 chr17 77294965 77295263 -8143217 - L1MC1 LINE L1 -373 5960 5678 331 287 43 9 chr17 77295458 77295573 -8142907 - MER5A DNA MER1_type -70 119 1 1326 313 83 28 chr17 77295716 77296404 -8142076 - L3 LINE CR1 -192 1385 660 2270 110 0 0 chr17 77296532 77296842 -8141638 + AluSx SINE Alu 3 312 0 289 203 43 14 chr17 77296880 77296949 -8141531 + MER5A DNA MER1_type 2 72 -117 349 339 54 36 chr17 77297113 77297337 -8141143 - L3 LINE CR1 -984 593 366 221 222 96 91 chr17 77297478 77297676 -8140804 + L2 LINE L2 2848 3046 -226 2242 102 7 0 chr17 77297736 77298041 -8140439 - AluSx SINE Alu -5 307 1 300 143 0 0 chr17 77298317 77298373 -8140107 + (TG)n Simple_repeat Simple_repeat 2 57 0 1295 142 119 4 chr17 77298375 77298628 -8139852 - AluJo SINE Alu -30 282 1 596 196 0 0 chr17 77299223 77299325 -8139155 + AluJ/FLAM SINE Alu 1 102 -210 1626 166 12 66 chr17 77299332 77299651 -8138829 + AluJb SINE Alu 3 304 -8 1842 146 7 27 chr17 77301660 77301961 -8136519 + AluJo SINE Alu 2 296 -16 407 326 0 30 chr17 77302260 77302392 -8136088 + MER5A DNA MER1_type 22 149 -40 697 189 0 39 chr17 77302610 77302737 -8135743 + FLAM_A SINE Alu 5 126 -7 759 276 90 42 chr17 77302814 77303246 -8135234 + L1ME3 LINE L1 5616 6068 -94 1228 112 0 0 chr17 77303340 77303510 -8134970 - AluSc SINE Alu -8 301 132 1885 127 55 7 chr17 77303510 77303802 -8134678 - AluSx SINE Alu -6 306 1 810 129 0 77 chr17 77304203 77304358 -8134122 - FLAM_C SINE Alu 0 143 1 294 278 0 52 chr17 77304431 77304546 -8133934 + G-rich Low_complexity Low_complexity 2 110 0 242 281 36 96 chr17 77305789 77306058 -8132422 - MIR SINE MIR -10 252 3 289 305 86 0 chr17 77306664 77306785 -8131695 - MIR SINE MIR -44 164 28 324 0 0 0 chr17 77307543 77307579 -8130901 + (CA)n Simple_repeat Simple_repeat 2 37 0 244 152 0 76 chr17 77308849 77308928 -8129552 + (CCCCG)n Simple_repeat Simple_repeat 3 75 0 270 332 101 35 chr17 77309226 77309512 -8128968 - L2 LINE L2 -2 3270 2966 315 183 134 12 chr17 77309537 77309619 -8128861 - L2 LINE L2 -7 3306 3215 331 233 214 0 chr17 77310238 77310341 -8128139 - L2 LINE L2 -6 3307 3183 874 206 78 0 chr17 77310848 77311052 -8127428 - MER5C DNA MER1_type -100 224 5 1848 91 0 4 chr17 77311236 77311479 -8127001 + AluY SINE Alu 53 294 -17 435 260 58 37 chr17 77311954 77312196 -8126284 - L1ME3A LINE L1 0 6170 5924 265 331 22 22 chr17 77312240 77312376 -8126104 - L2 LINE L2 -174 3098 2963 685 206 0 12 chr17 77312378 77312548 -8125932 + (TG)n Simple_repeat Simple_repeat 2 169 0 2072 134 0 3 chr17 77312637 77312944 -8125536 + AluSq SINE Alu 1 306 -7 983 211 33 38 chr17 77312959 77313172 -8125308 - MER20 DNA MER1_type -3 216 5 1073 212 9 17 chr17 77313981 77314312 -8124168 - MLT1E1 LTR MaLR -10 644 312 1853 146 3 3 chr17 77314312 77314600 -8123880 + AluSx SINE Alu 1 288 -24 438 36 0 0 chr17 77314604 77314660 -8123820 + (TAAAA)n Simple_repeat Simple_repeat 5 60 0 1073 212 9 17 chr17 77314660 77314775 -8123705 - MLT1E1 LTR MaLR -345 309 137 1423 158 0 9 chr17 77314816 77315037 -8123443 - AluJb SINE Alu -93 219 1 428 181 48 16 chr17 77315037 77315152 -8123328 - MLT1E1 LTR MaLR -462 131 6 451 195 180 8 chr17 77315579 77315707 -8122773 - MLT1J LTR MaLR -140 371 222 1453 195 117 51 chr17 77315707 77316101 -8122379 + MSTC LTR MaLR 1 420 -8 422 230 10 0 chr17 77316116 77316216 -8122264 - MLT1J LTR MaLR -330 181 81 255 288 0 0 chr17 77316395 77316461 -8122019 + (TTCA)n Simple_repeat Simple_repeat 2 67 0 460 203 47 151 chr17 77317428 77317626 -8120854 - MER63A DNA MER1_type -1480 208 36 1992 110 40 3 chr17 77317626 77317927 -8120553 + AluSq SINE Alu 1 312 -1 460 203 47 151 chr17 77317927 77317960 -8120520 - MER63A DNA MER1_type -1652 36 1 219 36 0 0 chr17 77318376 77318404 -8120076 + (TTA)n Simple_repeat Simple_repeat 3 30 0 225 67 0 0 chr17 77318410 77318440 -8120040 - AluSx SINE Alu -20 282 253 1712 68 0 0 chr17 77318441 77318647 -8119833 - AluSx SINE Alu -106 206 1 232 341 122 8 chr17 77318868 77318991 -8119489 + L2 LINE L2 3136 3272 0 693 280 33 0 chr17 77319108 77319290 -8119190 + MIR SINE MIR 59 246 -16 2178 118 3 0 chr17 77319642 77319948 -8118532 + AluSx SINE Alu 1 307 -5 200 226 0 38 chr17 77319986 77320039 -8118441 + C-rich Low_complexity Low_complexity 1 51 0 268 275 129 10 chr17 77321377 77321570 -8116910 + LTR33 LTR ERVL 298 513 -8 2140 126 3 0 chr17 77321889 77322199 -8116281 + AluSq SINE Alu 1 311 -2 198 244 44 0 chr17 77323877 77323922 -8114558 - L2 LINE L2 -77 3236 3190 * 312 301 70 35 chr17 77323919 77324062 -8114418 + MIR SINE MIR 51 198 -64 1529 147 0 47 chr17 77324093 77324351 -8114129 + AluJo SINE Alu 12 257 -55 733 143 24 0 chr17 77324351 77324477 -8114003 - FLAM_C SINE Alu -4 139 11 382 241 138 78 chr17 77324632 77324914 -8113566 + MLT1J LTR MaLR 1 299 -212 30 27 0 0 chr17 77325117 77325154 -8113326 + AT_rich Low_complexity Low_complexity 1 37 0 258 95 0 0 chr17 77325222 77325264 -8113216 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 2025 117 0 23 chr17 77325264 77325558 -8112922 - AluSx SINE Alu -25 287 1 511 257 13 53 chr17 77326532 77326684 -8111796 - L2 LINE L2 -3 3310 3165 207 0 0 0 chr17 77328832 77328855 -8109625 + (TG)n Simple_repeat Simple_repeat 2 24 0 1068 144 23 0 chr17 77329485 77329659 -8108821 - FRAM SINE Alu -5 171 1 227 425 75 0 chr17 77329701 77329807 -8108673 + MER5B DNA MER1_type 63 176 -2 2341 80 10 0 chr17 77330007 77330307 -8108173 - AluY SINE Alu -8 303 1 493 216 23 6 chr17 77330336 77330507 -8107973 + (TG)n Simple_repeat Simple_repeat 2 175 0 2123 114 3 0 chr17 77330577 77330874 -8107606 - AluSx SINE Alu -14 298 1 189 0 0 0 chr17 77330906 77330927 -8107553 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 459 0 0 0 chr17 77330926 77330977 -8107503 + (CA)n Simple_repeat Simple_repeat 2 52 0 1018 187 0 0 chr17 77331194 77331360 -8107120 - FRAM SINE Alu 0 166 1 1998 106 0 18 chr17 77331395 77331712 -8106768 - AluSc SINE Alu 0 312 1 2057 135 0 10 chr17 77332059 77332370 -8106110 + AluSx SINE Alu 1 308 -4 1970 135 0 0 chr17 77332375 77332656 -8105824 + AluJo SINE Alu 1 281 -31 2221 106 0 3 chr17 77332775 77333078 -8105402 + AluSx SINE Alu 1 302 -10 691 175 0 25 chr17 77333859 77333979 -8104501 + FLAM_C SINE Alu 1 117 -16 196 294 20 0 chr17 77335710 77335761 -8102719 + MIR SINE MIR 89 140 -68 180 320 117 10 chr17 77335945 77336048 -8102432 - MER5A DNA MER1_type -26 163 50 2202 104 3 7 chr17 77337014 77337312 -8101168 - AluSx SINE Alu -15 297 1 180 313 0 0 chr17 77338733 77338781 -8099699 + L2 LINE L2 3265 3312 -1 2348 57 40 0 chr17 77338797 77339096 -8099384 + AluYa5 SINE Alu 1 311 0 414 57 0 0 chr17 77339098 77339151 -8099329 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 596 334 56 16 chr17 77340101 77340424 -8098056 + MER46C DNA MER2_type 3 338 0 253 0 0 0 chr17 77340951 77340979 -8097501 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1464 97 0 39 chr17 77340979 77341186 -8097294 - AluSg/x SINE Alu -30 280 82 457 229 0 14 chr17 77392987 77393131 -8045349 + CT-rich Low_complexity Low_complexity 2 143 0 728 305 155 20 chr17 77393131 77393518 -8044962 - L1ME LINE L1 -435 5729 5395 2132 53 0 0 chr17 77393518 77393763 -8044717 - AluY SINE Alu -9 302 58 728 305 155 20 chr17 77393763 77394583 -8043897 - L1ME LINE L1 -769 5395 4687 2330 96 7 7 chr17 77394583 77394885 -8043595 - AluSq SINE Alu -11 302 1 728 305 155 20 chr17 77394885 77395329 -8043151 - L1ME LINE L1 -1477 4687 3850 298 193 0 18 chr17 77395331 77395388 -8043092 - AluS SINE Alu -14 286 231 3328 205 68 75 chr17 77395388 77395714 -8042766 - HUERS-P3 LTR ERV1 -5907 1530 1203 2325 126 0 0 chr17 77395714 77396023 -8042457 + AluSq SINE Alu 1 309 -4 3328 205 68 75 chr17 77396023 77396429 -8042051 - HUERS-P3 LTR ERV1 -6234 1203 796 2619 55 0 10 chr17 77396429 77396741 -8041739 - AluY SINE Alu -2 309 1 3328 205 68 75 chr17 77396741 77397480 -8041000 - HUERS-P3 LTR ERV1 -6641 796 1 3989 114 40 3 chr17 77397480 77398101 -8040379 - LTR9B LTR ERV1 0 644 1 390 338 7 0 chr17 77398110 77398258 -8040222 - MIR SINE MIR -109 153 5 1875 155 10 7 chr17 77398982 77399272 -8039208 + AluJo SINE Alu 13 303 -9 468 0 0 0 chr17 77399482 77399534 -8038946 + (TG)n Simple_repeat Simple_repeat 2 53 0 2272 120 7 0 chr17 77400266 77400575 -8037905 - AluSx SINE Alu -1 311 1 22 0 0 0 chr17 77400924 77400946 -8037534 + AT_rich Low_complexity Low_complexity 1 22 0 1786 166 10 10 chr17 77400946 77401235 -8037245 - AluJo SINE Alu -23 289 1 205 336 66 33 chr17 77401238 77401360 -8037120 - MIR SINE MIR -69 193 68 1069 213 24 21 chr17 77401618 77401769 -8036711 - MLT1D LTR MaLR -6 499 357 3280 142 13 8 chr17 77401769 77402292 -8036188 - MER1A DNA MER1_type 0 527 2 1069 213 24 21 chr17 77402292 77402401 -8036079 - MLT1D LTR MaLR -148 357 250 697 217 7 0 chr17 77402446 77402589 -8035891 - MLT1D LTR MaLR -360 145 2 351 291 45 17 chr17 77403023 77403202 -8035278 - L2 LINE L2 -1003 2311 2128 714 219 75 59 chr17 77403212 77403351 -8035129 - MER63A DNA MER1_type -1483 205 61 2241 118 0 3 chr17 77403351 77403655 -8034825 - AluSx SINE Alu -9 303 1 714 219 75 59 chr17 77403655 77403702 -8034778 - MER63A DNA MER1_type -1627 61 16 225 146 0 0 chr17 77404445 77404493 -8033987 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 384 257 5 14 chr17 77404705 77404926 -8033554 + GA-rich Low_complexity Low_complexity 1 218 0 327 303 22 74 chr17 77404927 77405075 -8033405 + L1ME3 LINE L1 5733 5866 -296 1960 100 81 4 chr17 77405075 77405346 -8033134 + AluSg SINE Alu 3 294 -16 327 303 22 74 chr17 77405346 77405428 -8033052 + L1ME3 LINE L1 5866 5951 -211 678 191 8 0 chr17 77405514 77405640 -8032840 + FLAM_A SINE Alu 1 127 -6 273 305 81 63 chr17 77407457 77407680 -8030800 + L2 LINE L2 3046 3272 0 467 321 61 42 chr17 77407865 77408242 -8030238 + L2 LINE L2 2929 3312 -1 1259 329 43 21 chr17 77408293 77409013 -8029467 + ERVL LTR ERVL 1604 2339 -3425 224 285 90 21 chr17 77409773 77409917 -8028563 + L2 LINE L2 3160 3313 0 334 331 41 47 chr17 77410069 77410434 -8028046 + L2 LINE L2 2919 3281 -32 224 285 90 21 chr17 77411077 77411221 -8027259 + L2 LINE L2 3160 3313 0 334 331 41 47 chr17 77411368 77411733 -8026747 + L2 LINE L2 2919 3281 -32 321 247 21 0 chr17 77413389 77413482 -8024998 + (CA)n Simple_repeat Simple_repeat 2 96 0 510 188 0 24 chr17 77414175 77414431 -8024049 + (TG)n Simple_repeat Simple_repeat 1 249 0 476 318 62 55 chr17 77416967 77417367 -8021113 + L2 LINE L2 2911 3313 0 1229 302 47 38 chr17 77417445 77418131 -8020349 + ERVL LTR ERVL 1649 2340 -3424 372 332 35 38 chr17 77419151 77419524 -8018956 + L2 LINE L2 2911 3282 -31 297 242 22 17 chr17 77420331 77420509 -8017971 + (CA)n Simple_repeat Simple_repeat 1 179 0 206 296 0 0 chr17 77421209 77421263 -8017217 + (TG)n Simple_repeat Simple_repeat 1 54 0 1353 228 87 72 chr17 77422120 77422774 -8015706 - MER4A LTR ERV1 0 664 1 903 200 0 0 chr17 77422847 77422992 -8015488 - FRAM SINE Alu -31 145 1 1071 99 0 0 chr17 77423542 77423673 -8014807 + AluSq/x SINE Alu 5 135 -177 2172 119 10 3 chr17 77423673 77423975 -8014505 + AluSx SINE Alu 1 304 -8 346 261 17 17 chr17 77424556 77424671 -8013809 - L1ME3A LINE L1 0 6170 6056 1729 228 97 13 chr17 77424677 77425129 -8013351 + MLT1F LTR MaLR 53 542 0 382 301 128 33 chr17 77425183 77425542 -8012938 - L2 LINE L2 0 3313 2921 2100 121 39 12 chr17 77425658 77425990 -8012490 + THE1B LTR MaLR 1 341 -23 2175 125 0 0 chr17 77426001 77426282 -8012198 - AluSq SINE Alu -32 281 1 2707 210 20 2 chr17 77426947 77427489 -8010991 - L1MD2 LINE L1 -322 6037 5486 1477 204 30 21 chr17 77427489 77427925 -8010555 + LTR2B LTR ERV1 1 490 0 1734 229 20 44 chr17 77427984 77428465 -8010015 + MER74B LTR ERVL 134 604 -18 1690 163 64 7 chr17 77428465 77428748 -8009732 - AluJo SINE Alu -13 299 1 1734 229 20 44 chr17 77428748 77428767 -8009713 + MER74B LTR ERVL 604 622 0 2126 137 0 3 chr17 77429237 77429544 -8008936 - AluJb SINE Alu -6 306 1 663 228 43 56 chr17 77430687 77430919 -8007561 + LTR16C LTR ERVL 263 491 0 623 125 10 0 chr17 77431176 77431280 -8007200 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 240 360 59 39 chr17 77431280 77431416 -8007064 + L2 LINE L2 3158 3300 -13 2335 58 0 24 chr17 77431416 77431727 -8006753 + AluY SINE Alu 1 304 0 240 360 59 39 chr17 77431727 77431742 -8006738 + L2 LINE L2 3300 3313 0 288 245 0 0 chr17 77432335 77432478 -8006002 + (CA)n Simple_repeat Simple_repeat 1 143 0 552 325 18 0 chr17 77433244 77433413 -8005067 + MIR SINE MIR 43 214 -48 272 224 53 0 chr17 77433422 77433498 -8004982 + MER116 DNA Mariner 1 80 0 328 304 95 30 chr17 77433500 77433668 -8004812 + L1M4 LINE L1 3259 3437 -2709 1390 143 0 10 chr17 77433693 77433902 -8004578 + AluJo SINE Alu 87 293 -19 2116 135 0 10 chr17 77433904 77434207 -8004273 + AluJb SINE Alu 1 300 -12 300 120 0 0 chr17 77434419 77434469 -8004011 + (TC)n Simple_repeat Simple_repeat 1 50 0 418 108 0 14 chr17 77435017 77435091 -8003389 + Alu SINE Alu 239 311 0 919 136 29 0 chr17 77435163 77435303 -8003177 - FRAM SINE Alu -11 165 22 2240 124 3 0 chr17 77436417 77436716 -8001764 - AluSx SINE Alu -12 300 1 451 325 47 14 chr17 77437053 77437265 -8001215 + MIR SINE MIR 34 252 -10 1235 220 8 8 chr17 77438208 77438467 -8000013 - AluJo SINE Alu -53 259 1 2258 134 0 6 chr17 77438972 77439286 -7999194 - AluSx SINE Alu 0 312 1 270 116 0 0 chr17 77439347 77439390 -7999090 + (GAAA)n Simple_repeat Simple_repeat 3 45 0 2074 137 0 7 chr17 77439511 77439823 -7998657 - AluSx SINE Alu 0 310 1 205 374 61 9 chr17 77439823 77439936 -7998544 - MIR SINE MIR -57 151 33 448 287 35 17 chr17 77439968 77440142 -7998338 - L1MC4 LINE L1 -1 8041 7865 2479 93 0 0 chr17 77440792 77441104 -7997376 + AluSx SINE Alu 1 312 0 273 286 27 36 chr17 77441232 77441344 -7997136 + MIR SINE MIR 27 137 -71 550 316 66 40 chr17 77441390 77441405 -7997075 - HAL1 LINE L1 -1053 1454 1441 2078 129 13 13 chr17 77441405 77441708 -7996772 - AluSx SINE Alu -9 303 1 550 316 66 40 chr17 77441708 77441920 -7996560 - HAL1 LINE L1 -1066 1441 1221 377 244 39 55 chr17 77441924 77442051 -7996429 - HAL1 LINE L1 -1333 1174 1050 2131 120 14 0 chr17 77442058 77442349 -7996131 + AluSx SINE Alu 7 301 -11 279 0 0 0 chr17 77442351 77442382 -7996098 + (TA)n Simple_repeat Simple_repeat 1 31 0 254 306 27 27 chr17 77442733 77442844 -7995636 + MIR SINE MIR 27 137 -71 2092 131 17 0 chr17 77442905 77443203 -7995277 - AluSx SINE Alu -9 303 1 529 271 8 0 chr17 77443205 77443334 -7995146 - FLAM_A SINE Alu -3 130 1 252 241 19 0 chr17 77443737 77443791 -7994689 + CT-rich Low_complexity Low_complexity 4 58 0 2496 62 10 3 chr17 77443810 77444117 -7994363 - AluY SINE Alu -2 309 1 2110 129 17 0 chr17 77444322 77444609 -7993871 + AluSx SINE Alu 3 294 -18 180 0 0 0 chr17 77444609 77444629 -7993851 + (TA)n Simple_repeat Simple_repeat 2 21 0 1771 161 6 57 chr17 77445350 77445550 -7992930 - AluJo SINE Alu -12 300 120 378 0 0 0 chr17 77445550 77445592 -7992888 + (TTTTG)n Simple_repeat Simple_repeat 5 46 0 1771 161 6 57 chr17 77445592 77445707 -7992773 - AluJo SINE Alu -192 120 1 249 33 0 0 chr17 77445844 77445874 -7992606 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 181 338 105 23 chr17 77446214 77446347 -7992133 - L2 LINE L2 -435 2879 2736 2337 101 3 0 chr17 77446352 77446650 -7991830 + AluSx SINE Alu 1 299 -13 307 239 45 57 chr17 77446650 77446738 -7991742 - L1ME4a LINE L1 0 6121 6035 460 236 136 15 chr17 77446754 77446953 -7991527 - L1ME4a LINE L1 -266 5855 5633 2306 108 0 10 chr17 77447143 77447457 -7991023 + AluSx SINE Alu 1 311 -1 1271 116 0 0 chr17 77447542 77447714 -7990766 + AluSg/x SINE Alu 132 303 -9 22 35 0 0 chr17 77447863 77447892 -7990588 + AT_rich Low_complexity Low_complexity 1 29 0 2209 112 3 0 chr17 77447900 77448187 -7990293 + AluSx SINE Alu 3 290 -22 884 325 78 32 chr17 77448319 77448833 -7989647 - L2 LINE L2 0 3313 2777 560 300 54 67 chr17 77448841 77449231 -7989249 - L2 LINE L2 -686 2628 2244 2537 80 0 0 chr17 77449383 77449685 -7988795 - AluSg SINE Alu -8 302 1 237 250 50 50 chr17 77449691 77449791 -7988689 - L1ME4a LINE L1 -2148 5660 5561 1382 98 49 41 chr17 77449802 77449941 -7988539 - LTR18B LTR ERVL 0 614 478 2183 45 15 0 chr17 77449941 77450208 -7988272 - L1PA6 LINE L1 -6 6148 5878 1382 98 49 41 chr17 77450208 77450527 -7987953 - LTR18B LTR ERVL -136 478 37 2071 87 73 37 chr17 77450527 77450827 -7987653 - AluSx SINE Alu -1 311 1 1382 98 49 41 chr17 77450827 77450865 -7987615 - LTR18B LTR ERVL -577 37 1 226 268 220 36 chr17 77450870 77451120 -7987360 - L1ME4a LINE L1 -2259 5549 5254 431 326 85 35 chr17 77451312 77451594 -7986886 - L1ME4a LINE L1 -989 5157 4862 261 85 21 0 chr17 77451739 77451786 -7986694 - L1MA3 LINE L1 0 6305 6258 4797 118 1 9 chr17 77451786 77452537 -7985943 + HERVH LTR ERV1 2086 2830 -4883 6690 126 34 56 chr17 77452537 77453760 -7984720 + HERVH LTR ERV1 3357 4552 -3161 1560 137 0 8 chr17 77453750 77454013 -7984467 + HERVH LTR ERV1 5756 6016 -1697 * 3077 127 8 2 chr17 77454006 77454509 -7983971 + HERVH LTR ERV1 7157 7662 -51 15078 145 22 30 chr17 77454509 77454565 -7983915 - L1M3 LINE L1 -666 6921 6866 1326 176 194 31 chr17 77454565 77454952 -7983528 + LTR7 LTR ERV1 1 450 0 15078 145 22 30 chr17 77454952 77455403 -7983077 - L1M3 LINE L1 -721 6866 6413 1557 191 3 27 chr17 77455403 77455702 -7982778 - AluJb SINE Alu -20 292 1 15078 145 22 30 chr17 77455702 77458982 -7979498 - L1M3 LINE L1 -1174 6413 3107 1868 174 0 3 chr17 77458982 77459276 -7979204 + AluJb SINE Alu 1 293 -19 15078 145 22 30 chr17 77459276 77459492 -7978988 - L1M3 LINE L1 -4480 3107 2891 1700 120 8 8 chr17 77459492 77459742 -7978738 - AluSx SINE Alu 0 312 63 15078 145 22 30 chr17 77459742 77460620 -7977860 - L1M3 LINE L1 -4696 2891 2089 190 371 67 0 chr17 77461228 77461333 -7977147 - MIR3 SINE MIR -7 201 90 378 0 0 0 chr17 77462208 77462250 -7976230 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 623 159 37 19 chr17 77462251 77462358 -7976122 - FLAM_C SINE Alu -11 132 24 435 78 18 96 chr17 77462502 77462668 -7975812 + (ATGTG)n Simple_repeat Simple_repeat 5 157 0 236 145 16 71 chr17 77462694 77462952 -7975528 + (ATGTG)n Simple_repeat Simple_repeat 1 243 0 269 183 0 77 chr17 77462974 77463078 -7975402 + (ATGTG)n Simple_repeat Simple_repeat 5 100 0 306 110 22 82 chr17 77463096 77463278 -7975202 + (ATGTG)n Simple_repeat Simple_repeat 3 173 0 405 191 0 93 chr17 77463320 77463514 -7974966 + (ATGTG)n Simple_repeat Simple_repeat 3 178 0 2155 159 39 24 chr17 77464372 77464412 -7974068 - MLT2A2 LTR ERVL 0 554 516 450 0 0 0 chr17 77464412 77464462 -7974018 + (TA)n Simple_repeat Simple_repeat 2 51 0 2155 159 39 24 chr17 77464462 77464954 -7973526 - MLT2A2 LTR ERVL -38 516 3 2192 165 27 133 chr17 77465975 77466267 -7972213 + L1MB1 LINE L1 4894 5216 -955 1080 195 0 6 chr17 77466267 77466441 -7972039 - FAM SINE Alu -2 173 1 2192 165 27 133 chr17 77466441 77467176 -7971304 + L1MB1 LINE L1 5216 5791 -380 2426 111 19 30 chr17 77467176 77467544 -7970936 + THE1B LTR MaLR 1 364 0 2192 165 27 133 chr17 77467544 77467559 -7970921 + L1MB1 LINE L1 5791 5806 -365 2578 153 83 10 chr17 77467656 77468086 -7970394 - L1MA5 LINE L1 -3 6297 5825 2409 90 0 0 chr17 77468086 77468385 -7970095 - AluSc SINE Alu -10 299 1 2578 153 83 10 chr17 77468385 77468450 -7970030 - L1MA5 LINE L1 -475 5825 5766 1957 167 22 19 chr17 77468451 77468816 -7969664 + L1MB1 LINE L1 5790 6155 -13 2143 118 0 23 chr17 77469059 77469364 -7969116 - AluSq SINE Alu -15 298 1 1852 160 4 0 chr17 77472879 77473198 -7965282 + AluJb SINE Alu 3 322 0 225 146 0 0 chr17 77474163 77474211 -7964269 + (TCTG)n Simple_repeat Simple_repeat 2 49 0 2368 68 17 0 chr17 77475465 77475757 -7962723 + AluSx SINE Alu 1 297 -15 2210 128 0 0 chr17 77476116 77476413 -7962067 - AluSx SINE Alu -15 297 1 569 244 73 53 chr17 77478433 77478510 -7959970 - MIR SINE MIR -34 228 154 2232 123 30 38 chr17 77478510 77478877 -7959603 - THE1B LTR MaLR 0 364 1 569 244 73 53 chr17 77478877 77479010 -7959470 - MIR SINE MIR -108 154 15 1388 236 93 86 chr17 77479151 77479837 -7958643 - MER21B LTR ERV1 -149 714 24 621 301 77 27 chr17 77479922 77479962 -7958518 + L1MC4a LINE L1 5626 5663 -2145 424 256 39 78 chr17 77479962 77480142 -7958338 - MER69A DNA AcHobo -4 173 1 621 301 77 27 chr17 77480142 77480400 -7958080 + L1MC4a LINE L1 5663 5939 -1869 1855 131 60 0 chr17 77480595 77480878 -7957602 + AluJo SINE Alu 13 312 0 787 189 0 8 chr17 77481319 77481451 -7957029 + FLAM_A SINE Alu 1 131 -2 436 253 38 90 chr17 77482549 77482729 -7955751 - L1ME4a LINE L1 -16 6105 5944 1752 135 68 40 chr17 77482729 77483025 -7955455 - AluJb SINE Alu -8 304 1 436 253 38 90 chr17 77483025 77483133 -7955347 - L1ME4a LINE L1 -177 5944 5832 409 288 18 0 chr17 77483369 77483480 -7955000 - L2 LINE L2 0 3272 3160 2381 104 0 3 chr17 77484232 77484541 -7953939 - AluSx SINE Alu -4 308 1 236 279 15 0 chr17 77484557 77484625 -7953855 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 265 317 16 24 chr17 77485737 77485860 -7952620 + L3 LINE CR1 1406 1527 -50 204 40 0 0 chr17 77486170 77486195 -7952285 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 2099 137 20 0 chr17 77486195 77486501 -7951979 - AluSx SINE Alu 0 312 1 2278 113 7 0 chr17 77486838 77487148 -7951332 - AluSx SINE Alu 0 312 1 275 221 87 58 chr17 77488088 77488192 -7950288 - MIR3 SINE MIR -33 175 69 1938 139 21 0 chr17 77488461 77488742 -7949738 - AluJo SINE Alu -24 288 2 268 160 101 0 chr17 77488867 77488935 -7949545 - FLAM_A SINE Alu -5 128 70 1682 166 41 0 chr17 77489707 77489978 -7948502 - AluJo SINE Alu -30 282 1 316 229 156 0 chr17 77490295 77490391 -7948089 - L1ME4a LINE L1 -2121 5687 5577 2172 136 10 0 chr17 77490420 77490729 -7947751 + AluSx SINE Alu 1 312 0 1768 151 6 44 chr17 77490741 77491059 -7947421 - AluJb SINE Alu -6 306 1 2017 113 60 28 chr17 77491135 77491488 -7946992 - THE1B LTR MaLR 0 364 1 11502 81 6 11 chr17 77491488 77493075 -7945405 - THE1B-int LTR MaLR 0 1580 1 2245 121 16 25 chr17 77493078 77493442 -7945038 - THE1B LTR MaLR -3 361 1 292 360 0 0 chr17 77493449 77493596 -7944884 + L1M4 LINE L1 4437 4583 -1563 1174 71 14 0 chr17 77493597 77493738 -7944742 + AluSp SINE Alu 1 143 -170 1639 87 4 0 chr17 77493744 77493973 -7944507 + THE1-int LTR MaLR 236 465 -1115 322 214 97 39 chr17 77493975 77494078 -7944402 - L1ME4a LINE L1 -1464 4682 4574 1126 122 0 0 chr17 77494078 77494226 -7944254 - AluSp SINE Alu -20 293 146 260 166 0 0 chr17 77494226 77494275 -7944205 - FRAM/FAM SINE Alu -99 76 33 273 57 0 0 chr17 77494589 77494624 -7943856 + (TG)n Simple_repeat Simple_repeat 2 36 0 336 258 7 10 chr17 77495045 77495345 -7943135 + (CA)n Simple_repeat Simple_repeat 1 298 0 510 70 0 0 chr17 77496181 77496252 -7942228 + (TGGA)n Simple_repeat Simple_repeat 4 74 0 486 122 31 0 chr17 77496932 77497030 -7941450 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 2283 107 3 3 chr17 77497099 77497399 -7941081 + AluSx SINE Alu 1 300 -12 205 162 0 0 chr17 77497532 77497569 -7940911 + (CGGG)n Simple_repeat Simple_repeat 3 39 0 1002 157 6 6 chr17 77497569 77497741 -7940739 + MER20 DNA MER1_type 36 207 -12 612 154 135 39 chr17 77499298 77499454 -7939026 - MER45A DNA AcHobo -3 175 5 563 135 35 35 chr17 77499935 77500251 -7938229 + (TG)n Simple_repeat Simple_repeat 1 316 0 318 164 36 18 chr17 77500267 77500377 -7938103 + (TG)n Simple_repeat Simple_repeat 2 113 0 482 124 39 34 chr17 77500394 77500572 -7937908 + (TG)n Simple_repeat Simple_repeat 1 179 0 453 148 61 7 chr17 77500584 77500888 -7937592 + (TG)n Simple_repeat Simple_repeat 1 320 0 238 327 106 0 chr17 77501346 77501450 -7937030 - MLT1I LTR MaLR -232 177 63 396 306 0 0 chr17 77502879 77502987 -7935493 + MIR SINE MIR 47 154 -108 1768 195 32 35 chr17 77503411 77503589 -7934891 + MLT1A2 LTR MaLR 1 178 -196 2021 185 8 6 chr17 77503589 77503951 -7934529 - MLT1A1 LTR MaLR -2 363 1 1768 195 32 35 chr17 77503951 77504147 -7934333 + MLT1A2 LTR MaLR 178 374 0 2458 188 44 102 chr17 77505614 77506206 -7932274 + MER77 LTR ERV1 1 555 -50 1856 205 74 49 chr17 77506206 77506598 -7931882 - MER87 LTR ERV1 0 541 131 2407 112 0 0 chr17 77506598 77506910 -7931570 + AluSx SINE Alu 1 312 0 1856 205 74 49 chr17 77506910 77507043 -7931437 - MER87 LTR ERV1 -410 131 3 2458 188 44 102 chr17 77507043 77507090 -7931390 + MER77 LTR ERV1 555 603 -2 2378 109 0 3 chr17 77507286 77507597 -7930883 + AluSx SINE Alu 1 310 -2 2320 37 52 0 chr17 77508529 77508823 -7929657 - AluY SINE Alu 0 308 1 182 260 40 73 chr17 77508824 77508974 -7929506 + L2 LINE L2 2347 2491 -823 1986 111 4 4 chr17 77509151 77509421 -7929059 + AluSx SINE Alu 43 312 0 307 316 93 7 chr17 77509427 77509566 -7928914 + HAL1b LINE L1 777 927 -421 208 153 0 136 chr17 77509855 77509897 -7928583 + L2 LINE L2 3220 3253 -19 2151 145 0 0 chr17 77509897 77510208 -7928272 - AluSx SINE Alu 0 312 2 208 153 0 136 chr17 77510208 77510224 -7928256 + L2 LINE L2 3253 3270 -2 1999 158 3 3 chr17 77511142 77511452 -7927028 + AluJb SINE Alu 2 311 -1 919 121 0 0 chr17 77512322 77512454 -7926026 + FLAM_C SINE Alu 1 132 -1 827 189 16 21 chr17 77513500 77513690 -7924790 + MER53 DNA DNA 1 189 0 274 326 8 16 chr17 77514537 77514666 -7923814 - L1ME2 LINE L1 -7 6157 6030 2006 178 2 45 chr17 77514699 77515098 -7923382 + MLT1B LTR MaLR 1 382 -8 1435 214 69 57 chr17 77515102 77515285 -7923195 - L1ME2 LINE L1 -199 5967 5788 1986 151 3 10 chr17 77515285 77515589 -7922891 - AluSx SINE Alu -10 302 1 1435 214 69 57 chr17 77515589 77515900 -7922580 - L1ME2 LINE L1 -378 5788 5467 2656 128 0 16 chr17 77515901 77516337 -7922143 + LTR3 LTR ERVK 1 429 0 13051 134 13 19 chr17 77516354 77518466 -7920014 + HERVK3 LTR ERVK 68 2165 -5078 1909 78 4 0 chr17 77518468 77518698 -7919782 + AluSp SINE Alu 67 297 -16 1295 273 48 21 chr17 77518730 77519247 -7919233 - L1M4 LINE L1 -2612 3534 3004 2484 152 31 0 chr17 77519500 77519915 -7918565 - MSTC LTR MaLR 0 428 1 579 234 55 7 chr17 77521448 77521545 -7916935 + MIR SINE MIR 14 122 -140 2041 132 33 30 chr17 77521545 77521908 -7916572 + THE1B LTR MaLR 1 364 0 579 234 55 7 chr17 77521908 77521955 -7916525 + MIR SINE MIR 122 165 -97 228 86 0 0 chr17 77521965 77522000 -7916480 + (TTA)n Simple_repeat Simple_repeat 1 35 0 1392 196 34 21 chr17 77522329 77522620 -7915860 + AluJo SINE Alu 1 295 -17 908 136 0 0 chr17 77522665 77522790 -7915690 + FLAM_C SINE Alu 1 125 -18 420 37 0 0 chr17 77522790 77522844 -7915636 + (TAA)n Simple_repeat Simple_repeat 2 55 0 1375 216 16 3 chr17 77523017 77523332 -7915148 + L1MB7 LINE L1 5566 5884 -300 377 55 0 0 chr17 77523332 77523387 -7915093 + Alu SINE Alu 246 300 -2 187 391 0 0 chr17 77523499 77523586 -7914894 + L2 LINE L2 3219 3305 -8 550 304 196 21 chr17 77524572 77524944 -7913536 - HAL1 LINE L1 -1291 1216 780 1991 104 34 0 chr17 77524969 77525238 -7913242 + AluSx SINE Alu 11 288 -24 3065 117 6 4 chr17 77525238 77525709 -7912771 + L1PB1 LINE L1 5680 6151 0 2164 116 0 3 chr17 77525989 77526297 -7912183 + AluSx SINE Alu 1 307 0 1169 328 72 18 chr17 77526468 77526936 -7911544 - HERV16 LTR ERVL -2073 2923 2425 1615 162 21 35 chr17 77526936 77527280 -7911200 - AluJo SINE Alu 0 342 3 1169 328 72 18 chr17 77527280 77527587 -7910893 - HERV16 LTR ERVL -2571 2425 2136 283 387 16 0 chr17 77527654 77527840 -7910640 - HERV16 LTR ERVL -4201 1563 1375 1763 158 51 21 chr17 77527957 77528293 -7910187 - L1MC1 LINE L1 0 6333 5988 2537 90 22 0 chr17 77528887 77529243 -7909237 - THE1B LTR MaLR 0 364 1 303 272 11 0 chr17 77529329 77529421 -7909059 + L1ME LINE L1 5679 5771 -399 326 145 0 0 chr17 77529447 77529509 -7908971 + L1MA10 LINE L1 6263 6324 -10 558 43 0 0 chr17 77529509 77529578 -7908902 + (GGAA)n Simple_repeat Simple_repeat 1 69 0 2164 128 0 0 chr17 77529706 77530002 -7908478 + AluSx SINE Alu 14 309 -3 214 244 0 0 chr17 77531617 77531658 -7906822 + polypurine Low_complexity Low_complexity 4 44 0 1103 95 31 0 chr17 77531766 77532071 -7906409 + (TAGA)n Simple_repeat Simple_repeat 1 314 0 232 340 100 20 chr17 77532099 77532249 -7906231 - MER5B DNA MER1_type -8 170 9 266 170 0 0 chr17 77532636 77532683 -7905797 - L1MD2 LINE L1 -213 6146 6100 2449 60 3 0 chr17 77532794 77533108 -7905372 + AluSp SINE Alu 1 315 0 227 26 0 0 chr17 77533655 77533693 -7904787 + L1PA3 LINE L1 6115 6152 -3 263 283 0 6 chr17 77533923 77534096 -7904384 + (TG)n Simple_repeat Simple_repeat 2 173 0 1839 189 62 39 chr17 77536052 77536538 -7901942 - MLT1D LTR MaLR -8 497 1 812 167 0 0 chr17 77537691 77537817 -7900663 + FLAM_C SINE Alu 1 126 -17 238 269 39 15 chr17 77539185 77539315 -7899165 + (CAGGG)n Simple_repeat Simple_repeat 4 136 0 587 261 151 16 chr17 77539492 77539737 -7898743 - MLT1G LTR MaLR -190 400 123 337 230 148 77 chr17 77539721 77539813 -7898667 + MER106A DNA MER1_type 13 97 -139 * 789 110 0 0 chr17 77539813 77539931 -7898549 + (TAGA)n Simple_repeat Simple_repeat 4 121 0 337 230 148 77 chr17 77539931 77540047 -7898433 + MER106A DNA MER1_type 97 236 0 * 473 226 22 0 chr17 77540047 77540159 -7898321 - MLT1G LTR MaLR -430 165 10 187 299 72 31 chr17 77540174 77540271 -7898209 - MIR3 SINE MIR -45 163 63 1746 219 94 57 chr17 77540472 77541056 -7897424 + L1MD2 LINE L1 5751 6356 -3 247 323 111 0 chr17 77541429 77541528 -7896952 + L2 LINE L2 3204 3313 0 215 316 0 0 chr17 77541533 77541590 -7896890 + GA-rich Low_complexity Low_complexity 2 58 0 285 327 231 11 chr17 77541623 77542186 -7896294 + L2 LINE L2 1793 2479 -835 627 26 0 0 chr17 77543812 77543889 -7894591 + (TC)n Simple_repeat Simple_repeat 2 78 0 559 180 36 0 chr17 77543889 77544000 -7894480 - FLAM_A SINE Alu -18 115 1 2165 106 14 3 chr17 77544719 77545012 -7893468 - AluJb SINE Alu -16 296 1 2436 82 3 13 chr17 77546086 77546392 -7892088 - AluSp SINE Alu -10 303 1 521 188 109 0 chr17 77547219 77547320 -7891160 - MER81 DNA DNA -1 113 2 607 336 99 38 chr17 77547327 77547414 -7891066 - L2 LINE L2 -2182 1132 1052 1758 177 10 3 chr17 77547414 77547713 -7890767 + AluSx SINE Alu 1 301 -11 607 336 99 38 chr17 77547713 77548449 -7890031 - L2 LINE L2 -2262 1052 258 198 342 25 25 chr17 77550993 77551072 -7887408 + L3 LINE CR1 1495 1573 -4 276 30 0 0 chr17 77551219 77551252 -7887228 + (CA)n Simple_repeat Simple_repeat 1 33 0 2340 82 3 10 chr17 77551667 77551800 -7886680 + AluSc SINE Alu 1 133 -176 2038 135 7 0 chr17 77551800 77552104 -7886376 + AluSx SINE Alu 1 306 -6 2340 82 3 10 chr17 77552104 77552263 -7886217 + AluSc SINE Alu 133 291 -18 1763 139 35 0 chr17 77552423 77552682 -7885798 + AluSx SINE Alu 44 311 -1 190 387 13 0 chr17 77552709 77552784 -7885696 - L3 LINE CR1 0 1577 1502 939 166 0 0 chr17 77553575 77553714 -7884766 - FLAM_C SINE Alu -4 139 1 476 209 0 0 chr17 77553938 77554024 -7884456 + AluJ/FLAM SINE Alu 2 87 -225 2271 101 0 13 chr17 77554351 77554649 -7883831 - AluSx SINE Alu -18 294 1 303 149 15 60 chr17 77554972 77555039 -7883441 + L2 LINE L2 3209 3272 0 2715 23 3 0 chr17 77555690 77555990 -7882490 + AluY SINE Alu 1 301 -10 215 278 49 76 chr17 77556011 77556155 -7882325 + L2 LINE L2 2180 2319 -995 861 293 28 16 chr17 77556172 77556425 -7882055 + MIR SINE MIR 2 257 -5 1122 141 0 38 chr17 77556718 77556902 -7881578 + AluSc SINE Alu 133 309 0 1332 228 54 29 chr17 77557052 77557123 -7881357 - MSTD LTR MaLR 0 396 328 2093 154 0 0 chr17 77557123 77557428 -7881052 + AluSx SINE Alu 4 308 -4 1332 228 54 29 chr17 77557428 77557742 -7880738 - MSTD LTR MaLR -68 328 1 461 303 29 63 chr17 77558078 77558316 -7880164 + L1MEd LINE L1 130 359 -5760 1167 208 70 37 chr17 77558566 77558774 -7879706 + MER58B DNA MER1_type 34 256 -2164 3558 155 22 3 chr17 77558774 77559366 -7879114 - LTR26 LTR ERV1 0 603 1 1167 208 70 37 chr17 77559366 77559455 -7879025 + MER58B DNA MER1_type 256 341 0 610 236 4 129 chr17 77560407 77560640 -7877840 - MIR SINE MIR -40 222 19 1982 106 8 0 chr17 77560844 77561098 -7877382 + AluSx SINE Alu 1 256 -56 710 165 8 8 chr17 77561106 77561233 -7877247 + MLT1A2 LTR MaLR 248 374 0 376 238 49 120 chr17 77561235 77561466 -7877014 - L2 LINE L2 -1290 2024 1825 2072 144 3 6 chr17 77561466 77561779 -7876701 + AluSx SINE Alu 1 312 0 376 238 49 120 chr17 77561779 77561896 -7876584 - L2 LINE L2 -1489 1825 1701 293 337 62 30 chr17 77562103 77562507 -7875973 + L1ME LINE L1 5261 5677 -444 1854 154 22 0 chr17 77562569 77562841 -7875639 + AluSx SINE Alu 1 278 -34 581 0 0 14 chr17 77562845 77562915 -7875565 + (TAAAA)n Simple_repeat Simple_repeat 2 70 0 1441 164 86 8 chr17 77563849 77564093 -7874387 + AluJo SINE Alu 1 263 -49 2157 144 7 0 chr17 77564163 77564468 -7874012 - AluSx SINE Alu -5 307 1 2185 125 7 3 chr17 77565194 77565498 -7872982 + AluSq SINE Alu 1 305 -8 455 226 113 0 chr17 77565518 77565661 -7872819 - MLT1J2 LTR MaLR -7 426 282 1795 241 87 51 chr17 77565864 77565955 -7872525 + L1MDa LINE L1 24 110 -6430 2323 112 0 16 chr17 77565955 77566269 -7872211 + AluSx SINE Alu 1 309 -3 1795 241 87 51 chr17 77566269 77566753 -7871727 + L1MDa LINE L1 110 629 -5911 855 232 56 91 chr17 77566753 77567097 -7871383 + LTR56 LTR ERV1 1 327 -118 2115 141 3 0 chr17 77567097 77567395 -7871085 + AluSx SINE Alu 1 299 -13 855 232 56 91 chr17 77567395 77567511 -7870969 + LTR56 LTR ERV1 327 445 0 1795 241 87 51 chr17 77567511 77567615 -7870865 + L1MDa LINE L1 629 728 -5812 1828 112 91 42 chr17 77567739 77568025 -7870455 + AluSx SINE Alu 1 300 -12 2148 104 0 47 chr17 77568318 77568636 -7869844 - AluSx SINE Alu -5 307 5 288 302 160 22 chr17 77569118 77569190 -7869290 - MER112 DNA MER1_type -2 258 197 585 221 79 122 chr17 77569190 77569548 -7868932 + MER4C LTR ERV1 1 334 -131 2354 100 0 7 chr17 77569548 77569848 -7868632 + AluSx SINE Alu 1 298 -14 585 221 79 122 chr17 77569848 77569972 -7868508 + MER4C LTR ERV1 334 462 -3 288 302 160 22 chr17 77569972 77570124 -7868356 - MER112 DNA MER1_type -63 197 3 2146 117 7 0 chr17 77570130 77570420 -7868060 + AluSx SINE Alu 1 292 -20 1253 214 44 55 chr17 77570574 77570939 -7867541 - MLT1A1 LTR MaLR 0 365 5 2365 104 0 3 chr17 77571757 77572066 -7866414 + AluSq SINE Alu 1 308 -5 509 118 0 0 chr17 77572372 77572448 -7866032 - AluS SINE Alu -235 77 2 548 287 160 9 chr17 77573419 77573750 -7864730 - LTR33 LTR ERVL -4 517 137 1628 154 146 56 chr17 77573758 77574298 -7864182 + MER4A LTR ERV1 3 455 -10 288 298 53 0 chr17 77574384 77574478 -7864002 + L2 LINE L2 3169 3267 -5 1888 140 64 0 chr17 77574518 77574890 -7863590 + AluSx SINE Alu 1 389 0 1375 201 21 40 chr17 77575462 77575835 -7862645 + L1MDa LINE L1 1259 1624 -4916 467 323 176 22 chr17 77575869 77576589 -7861891 + L2 LINE L2 2201 3029 -243 * 931 274 132 32 chr17 77576588 77576926 -7861554 - L2 LINE L2 0 3313 3010 2413 62 10 3 chr17 77576926 77577217 -7861263 + AluY SINE Alu 1 293 -18 931 274 132 32 chr17 77577217 77577588 -7860892 - L2 LINE L2 -303 3010 2545 357 289 97 9 chr17 77577683 77577797 -7860683 + L2 LINE L2 3134 3257 -15 219 69 0 0 chr17 77577800 77577829 -7860651 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2217 123 3 0 chr17 77577979 77578280 -7860200 + AluSg SINE Alu 1 302 -8 260 338 63 14 chr17 77578348 77578490 -7859990 - MIR SINE MIR 0 262 114 2049 129 35 0 chr17 77578544 77578707 -7859773 - AluSx SINE Alu -16 296 117 333 0 0 0 chr17 77578707 77578744 -7859736 + (TG)n Simple_repeat Simple_repeat 2 38 0 2049 129 35 0 chr17 77578744 77578866 -7859614 - AluSx SINE Alu -195 117 1 180 152 0 0 chr17 77579479 77579512 -7858968 + G-rich Low_complexity Low_complexity 1 33 0 207 260 0 0 chr17 77580105 77580155 -7858325 + CT-rich Low_complexity Low_complexity 2 51 0 983 123 0 0 chr17 77580533 77580663 -7857817 - AluSq/x SINE Alu -183 130 1 23 0 0 0 chr17 77580816 77580839 -7857641 + AT_rich Low_complexity Low_complexity 1 23 0 227 299 73 66 chr17 77581636 77581910 -7856570 - MLT1K LTR MaLR -124 464 189 332 337 73 29 chr17 77582001 77582345 -7856135 - L2 LINE L2 -1105 2209 1851 2052 116 0 58 chr17 77582689 77583000 -7855480 - AluSg SINE Alu -17 293 1 206 263 0 18 chr17 77583837 77583894 -7854586 + T-rich Low_complexity Low_complexity 2 57 0 1181 228 162 8 chr17 77584291 77584655 -7853825 - MLT1J LTR MaLR -55 456 37 219 245 0 0 chr17 77584844 77584893 -7853587 + (ATG)n Simple_repeat Simple_repeat 3 51 0 614 240 91 54 chr17 77584897 77585118 -7853362 - MIR SINE MIR -3 259 31 280 309 40 16 chr17 77585442 77585545 -7852935 + MER5B DNA MER1_type 1 109 -69 2333 105 0 0 chr17 77585545 77585841 -7852639 + AluY SINE Alu 1 296 -15 280 309 40 16 chr17 77585841 77585863 -7852617 + MER5B DNA MER1_type 109 129 -49 213 305 150 0 chr17 77586023 77586190 -7852290 - MIR SINE MIR 0 262 71 2188 128 0 0 chr17 77586320 77586616 -7851864 - AluSx SINE Alu -10 302 7 217 355 10 3 chr17 77586619 77586758 -7851722 - MIR SINE MIR -61 147 9 1889 145 0 33 chr17 77586852 77587156 -7851324 + AluSx SINE Alu 1 294 -18 390 360 44 0 chr17 77587185 77587410 -7851070 + L1ME3A LINE L1 5652 5886 -284 857 136 0 0 chr17 77587415 77587547 -7850933 + AluJo/FLAM SINE Alu 2 133 -169 2256 133 0 0 chr17 77587547 77587847 -7850633 + AluSx SINE Alu 1 300 -12 919 136 29 0 chr17 77588964 77589104 -7849376 + FRAM SINE Alu 22 165 -11 2465 93 0 3 chr17 77589179 77589490 -7848990 - AluSx SINE Alu -2 310 1 485 302 57 24 chr17 77589827 77590039 -7848441 + MIR SINE MIR 34 252 -10 379 373 47 8 chr17 77590391 77590462 -7848018 - MIR SINE MIR -16 246 179 2150 131 3 3 chr17 77590462 77590774 -7847706 - AluSx SINE Alu 0 312 1 379 373 47 8 chr17 77590774 77590938 -7847542 - MIR SINE MIR -83 179 2 291 286 52 0 chr17 77591007 77591084 -7847396 + L2 LINE L2 3151 3231 -41 455 132 105 0 chr17 77591311 77591387 -7847093 + AluSg/x SINE Alu 216 299 -10 227 156 31 47 chr17 77591396 77591460 -7847020 + (TATTG)n Simple_repeat Simple_repeat 3 65 0 30 0 0 0 chr17 77591522 77591552 -7846928 + AT_rich Low_complexity Low_complexity 1 30 0 1619 219 3 11 chr17 77591562 77591931 -7846549 + L1MB2 LINE L1 5793 6158 -13 1420 117 22 5 chr17 77592351 77592573 -7845907 + MER4B LTR ERV1 385 610 0 1894 168 23 0 chr17 77592708 77593011 -7845469 + AluJb SINE Alu 1 310 -2 696 278 124 37 chr17 77593117 77593470 -7845010 + L2 LINE L2 2670 3049 -223 219 103 0 0 chr17 77593910 77593949 -7844531 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 274 298 106 43 chr17 77594096 77594257 -7844223 - MIR SINE MIR -49 213 43 854 215 130 22 chr17 77594526 77594749 -7843731 - MIR SINE MIR -1 261 15 440 261 7 78 chr17 77596449 77596591 -7841889 - MIR3 SINE MIR -28 180 49 444 196 238 35 chr17 77596646 77596789 -7841691 + MER5A DNA MER1_type 10 181 -8 2160 128 7 16 chr17 77597050 77597356 -7841124 + AluSx SINE Alu 1 303 -9 1828 153 10 24 chr17 77598012 77598307 -7840173 - AluSx SINE Alu -20 292 2 1546 148 0 0 chr17 77598354 77598570 -7839910 + AluSx SINE Alu 32 247 -65 261 0 0 0 chr17 77598671 77598700 -7839780 + (TA)n Simple_repeat Simple_repeat 1 29 0 2137 125 14 0 chr17 77598701 77598996 -7839484 - AluSx SINE Alu -11 301 3 377 244 39 55 chr17 77598998 77599125 -7839355 + HAL1 LINE L1 1050 1174 -1333 559 320 77 30 chr17 77599129 77599341 -7839139 + HAL1 LINE L1 1221 1446 -1061 1884 120 0 15 chr17 77599341 77599600 -7838880 + AluSx SINE Alu 1 255 -57 559 320 77 30 chr17 77599600 77599621 -7838859 + HAL1 LINE L1 1446 1465 -1042 583 184 15 7 chr17 77599630 77599766 -7838714 + GA-rich Low_complexity Low_complexity 1 137 0 500 277 54 93 chr17 77599826 77600295 -7838185 + HAL1b LINE L1 376 1889 -618 1855 167 27 10 chr17 77600398 77600697 -7837783 + AluJb SINE Alu 1 304 -8 483 224 35 7 chr17 77600993 77601245 -7837235 + L1MC2 LINE L1 6157 6400 -1370 2265 114 0 0 chr17 77601245 77601564 -7836916 + AluSq SINE Alu 1 313 0 483 224 35 7 chr17 77601564 77601580 -7836900 + L1MC2 LINE L1 6400 7770 0 261 0 0 0 chr17 77601882 77601911 -7836569 + (A)n Simple_repeat Simple_repeat 1 29 0 2208 95 7 7 chr17 77602174 77602468 -7836012 + AluSg SINE Alu 4 297 -13 1527 230 19 14 chr17 77603026 77603396 -7835084 + L1MCb LINE L1 1 372 -5673 * 1724 248 93 39 chr17 77603392 77603487 -7834993 + L1MCb LINE L1 1589 1677 -4887 2276 93 10 0 chr17 77603487 77603777 -7834703 + AluSp SINE Alu 2 294 -19 1724 248 93 39 chr17 77603777 77603817 -7834663 + L1MCb LINE L1 1677 1713 -4851 1127 173 4 9 chr17 77603817 77604043 -7834437 + L1MA4 LINE L1 6075 6299 -1 1724 248 93 39 chr17 77604043 77604179 -7834301 + L1MCb LINE L1 1713 1840 -4724 1475 211 3 51 chr17 77604179 77604491 -7833989 + AluJo SINE Alu 3 299 -13 1724 248 93 39 chr17 77604491 77604911 -7833569 + L1MCb LINE L1 1840 2236 -4328 2148 116 0 30 chr17 77604911 77605212 -7833268 - AluSq SINE Alu -21 292 1 1724 248 93 39 chr17 77605212 77605987 -7832493 + L1MCb LINE L1 2236 3206 -3358 648 100 0 20 chr17 77606069 77606169 -7832311 + MER4A LTR ERV1 1 98 -566 372 132 8 5 chr17 77606169 77606290 -7832190 + MER4A LTR ERV1 261 440 -224 2063 112 0 58 chr17 77606491 77606803 -7831677 - AluSg SINE Alu -16 294 1 206 263 0 18 chr17 77607640 77607697 -7830783 + T-rich Low_complexity Low_complexity 2 57 0 238 242 263 0 chr17 77607793 77607888 -7830592 + MER96 DNA MER1_type? 1 120 -55 1124 228 162 8 chr17 77608099 77608463 -7830017 - MLT1J LTR MaLR -55 456 37 219 245 0 0 chr17 77608652 77608701 -7829779 + (ATG)n Simple_repeat Simple_repeat 3 51 0 639 250 91 50 chr17 77608705 77608925 -7829555 - MIR SINE MIR -3 259 31 297 338 40 20 chr17 77609249 77609352 -7829128 + MER5B DNA MER1_type 1 109 -69 2332 99 0 0 chr17 77609352 77609645 -7828835 + AluSc SINE Alu 1 293 -16 297 338 40 20 chr17 77609645 77609692 -7828788 + MER5B DNA MER1_type 109 154 -24 193 393 133 7 chr17 77610797 77610932 -7827548 - L2 LINE L2 -4 3268 3117 2235 104 3 28 chr17 77611068 77611385 -7827095 + AluSg SINE Alu 1 309 -1 354 159 0 0 chr17 77612861 77612930 -7825550 + (CA)n Simple_repeat Simple_repeat 1 69 0 2336 98 3 0 chr17 77613026 77613323 -7825157 + AluSq SINE Alu 1 298 -15 2412 110 0 0 chr17 77613895 77614204 -7824276 + AluSg SINE Alu 1 309 -1 564 204 124 10 chr17 77614275 77614451 -7824029 - MIR SINE MIR -21 241 48 189 277 92 0 chr17 77616109 77616174 -7822306 - L2 LINE L2 -1884 1430 1360 978 236 161 26 chr17 77616378 77616794 -7821686 - MLT1K LTR MaLR -1 475 4 2358 86 3 0 chr17 77616820 77617111 -7821369 + AluSp SINE Alu 1 292 -21 674 265 0 0 chr17 77617689 77617836 -7820644 + MER45A DNA AcHobo 1 147 -31 1474 151 53 60 chr17 77618284 77618590 -7819890 - AluSx SINE Alu 0 304 1 22 0 0 0 chr17 77618599 77618621 -7819859 + AT_rich Low_complexity Low_complexity 1 22 0 2296 103 0 0 chr17 77619555 77619908 -7818572 + AluSx SINE Alu 1 312 0 2080 125 0 11 chr17 77620397 77620684 -7817796 + AluSx SINE Alu 13 296 -16 2096 132 3 3 chr17 77620686 77620981 -7817499 + AluSx SINE Alu 1 295 -17 247 318 73 40 chr17 77621418 77621569 -7816911 + MIR SINE MIR 20 175 -87 2197 120 0 10 chr17 77621591 77621890 -7816590 + AluSx SINE Alu 1 296 -16 334 231 28 83 chr17 77621976 77622084 -7816396 + L1MC4 LINE L1 7939 8040 -2 321 145 28 0 chr17 77622278 77622346 -7816134 - Alu SINE Alu -244 55 2 2220 104 28 0 chr17 77622371 77622658 -7815822 + AluSx SINE Alu 1 295 -17 930 225 29 127 chr17 77622882 77623331 -7815149 + MER115 DNA AcHobo 289 693 0 1373 185 109 67 chr17 77623354 77623786 -7814694 + LTR7 LTR ERV1 1 450 0 444 134 93 21 chr17 77623790 77623887 -7814593 + MER4A LTR ERV1 1 104 -560 * 1589 112 45 77 chr17 77623883 77624239 -7814241 + MER4A LTR ERV1 262 664 0 2331 97 10 0 chr17 77624411 77624709 -7813771 + AluSg SINE Alu 1 301 -9 342 323 154 0 chr17 77625406 77625626 -7812854 + L1MC4a LINE L1 5089 5342 -804 1709 166 40 69 chr17 77625649 77625981 -7812499 + MLT2C1 LTR ERVL 6 325 -72 2292 76 41 0 chr17 77625981 77626271 -7812209 - AluY SINE Alu -9 302 1 1709 166 40 69 chr17 77626271 77626342 -7812138 + MLT2C1 LTR ERVL 325 397 0 711 258 125 15 chr17 77626370 77626556 -7811924 + L1MC4a LINE L1 5474 5638 -2170 2233 120 13 0 chr17 77626556 77626856 -7811624 + AluSx SINE Alu 1 304 -8 711 258 125 15 chr17 77626856 77627006 -7811474 + L1MC4a LINE L1 5638 5847 -1961 1902 189 73 125 chr17 77627018 77627671 -7810809 + LTR1B LTR ERV1 17 626 -200 2124 129 0 19 chr17 77627671 77627982 -7810498 - AluSx SINE Alu -7 305 1 1902 189 73 125 chr17 77627982 77628086 -7810394 + LTR1B LTR ERV1 626 734 -92 26 0 0 0 chr17 77628438 77628464 -7810016 + AT_rich Low_complexity Low_complexity 1 26 0 1765 169 6 34 chr17 77628468 77628788 -7809692 + AluJo SINE Alu 1 311 -1 1852 165 0 16 chr17 77628804 77629119 -7809361 - AluJb SINE Alu -2 310 1 603 209 0 30 chr17 77629191 77629325 -7809155 - L1MC1 LINE L1 0 6333 6204 350 267 40 34 chr17 77629429 77629605 -7808875 + L1ME4a LINE L1 5942 6118 -3 303 47 93 0 chr17 77629877 77629920 -7808560 - MLT1A1 LTR MaLR 0 365 319 512 0 0 31 chr17 77629921 77629986 -7808494 + (ATATG)n Simple_repeat Simple_repeat 4 66 0 1595 136 13 4 chr17 77629987 77630222 -7808258 - AluSx SINE Alu -25 287 51 1927 97 16 16 chr17 77630322 77630579 -7807901 - AluSp SINE Alu -56 257 1 779 203 7 13 chr17 77630579 77630732 -7807748 - MLT1A1 LTR MaLR -206 159 8 2236 105 0 3 chr17 77630941 77631254 -7807226 - AluSq SINE Alu 0 312 1 240 35 0 0 chr17 77631370 77631399 -7807081 + (TC)n Simple_repeat Simple_repeat 2 30 0 679 243 106 5 chr17 77631426 77631615 -7806865 + MIR SINE MIR 23 230 -32 261 289 53 18 chr17 77631813 77631927 -7806553 - MIR3 SINE MIR -4 204 87 2024 128 3 17 chr17 77632062 77632360 -7806120 - AluSq SINE Alu -19 294 1 2217 116 0 0 chr17 77632953 77633266 -7805214 - AluSq SINE Alu 0 313 1 213 39 0 0 chr17 77633386 77633412 -7805068 + (TTCC)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 77633662 77633709 -7804771 + (TG)n Simple_repeat Simple_repeat 2 48 0 1467 181 3 73 chr17 77633714 77633868 -7804612 - AluJo SINE Alu -30 282 119 195 42 0 0 chr17 77633868 77633892 -7804588 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2025 140 0 3 chr17 77633892 77634178 -7804302 - AluSx SINE Alu -27 285 1 1467 181 3 73 chr17 77634178 77634325 -7804155 - AluJo SINE Alu -191 121 1 2405 101 0 3 chr17 77634773 77635081 -7803399 - AluSg SINE Alu -3 307 1 1933 138 34 24 chr17 77635917 77636213 -7802267 + AluJo SINE Alu 14 312 0 402 291 85 72 chr17 77636213 77636519 -7801961 - L2 LINE L2 -128 3185 2876 997 169 6 0 chr17 77637052 77637212 -7801268 - FRAM SINE Alu -5 161 1 2337 84 7 32 chr17 77637221 77637529 -7800951 - AluSx SINE Alu -12 300 1 198 167 0 0 chr17 77638374 77638410 -7800070 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 1632 266 31 13 chr17 77638700 77639152 -7799328 - LTR16B LTR ERVL 0 464 5 523 199 0 11 chr17 77639236 77639438 -7799042 + (TG)n Simple_repeat Simple_repeat 1 199 0 239 191 21 0 chr17 77639439 77639486 -7798994 + (TATATG)n Simple_repeat Simple_repeat 6 53 0 372 267 0 0 chr17 77639489 77639669 -7798811 + (TG)n Simple_repeat Simple_repeat 1 180 0 442 215 18 6 chr17 77639717 77640064 -7798416 + (TG)n Simple_repeat Simple_repeat 1 351 0 280 234 19 13 chr17 77640084 77640238 -7798242 + (TG)n Simple_repeat Simple_repeat 2 156 0 516 204 22 6 chr17 77640268 77640588 -7797892 + (TG)n Simple_repeat Simple_repeat 1 325 0 905 273 114 35 chr17 77640863 77641346 -7797134 - LTR33 LTR ERVL 0 521 1 2214 106 0 6 chr17 77643170 77643481 -7794999 + AluSx SINE Alu 1 309 -3 268 305 16 62 chr17 77643587 77643715 -7794765 - MER5A DNA MER1_type 0 189 68 344 170 61 34 chr17 77643905 77644052 -7794428 + (GTGTG)n Simple_repeat Simple_repeat 1 151 0 249 161 42 35 chr17 77644059 77644202 -7794278 + (ATGTG)n Simple_repeat Simple_repeat 1 144 0 228 164 41 27 chr17 77644202 77644275 -7794205 + (GTGTG)n Simple_repeat Simple_repeat 4 77 0 222 134 53 41 chr17 77644808 77644979 -7793501 + (ATGTG)n Simple_repeat Simple_repeat 5 177 0 208 139 63 0 chr17 77645003 77645082 -7793398 + (TG)n Simple_repeat Simple_repeat 2 85 0 1358 246 85 11 chr17 77645544 77645910 -7792570 - MLT1C LTR MaLR -74 393 1 1974 119 22 19 chr17 77646006 77646317 -7792163 + AluSx SINE Alu 1 312 0 969 71 53 6 chr17 77646337 77646507 -7791973 + GA-rich Low_complexity Low_complexity 1 178 0 641 217 0 6 chr17 77646519 77646680 -7791800 + GA-rich Low_complexity Low_complexity 3 162 0 1938 115 14 0 chr17 77646702 77646980 -7791500 + AluSx SINE Alu 1 282 -30 2100 93 0 23 chr17 77647368 77647670 -7790810 + AluSx SINE Alu 1 295 -17 189 240 20 0 chr17 77649661 77649711 -7788769 + MIR SINE MIR 81 131 -77 236 278 90 20 chr17 77650378 77650523 -7787957 - MIR SINE MIR -36 172 3 2040 134 0 3 chr17 77650970 77651275 -7787205 - AluSx SINE Alu -8 304 1 2262 97 0 0 chr17 77652522 77652822 -7785658 + AluSg SINE Alu 1 300 -10 2393 84 0 0 chr17 77653830 77654141 -7784339 - AluY SINE Alu 0 311 1 501 259 29 7 chr17 77655106 77655245 -7783235 - MER117 DNA MER1_type -7 190 49 261 0 0 0 chr17 77656477 77656506 -7781974 + (CAGCC)n Simple_repeat Simple_repeat 4 32 0 1760 181 0 3 chr17 77657439 77657738 -7780742 - AluJb SINE Alu -12 300 3 2101 65 72 0 chr17 77659212 77659490 -7778990 + AluSx SINE Alu 1 298 -14 32 43 0 0 chr17 77659666 77659712 -7778768 + GC_rich Low_complexity Low_complexity 1 46 0 390 275 115 40 chr17 77662990 77663190 -7775290 + MIR SINE MIR 29 243 -19 900 119 0 0 chr17 77663369 77663487 -7774993 + FLAM_C SINE Alu 1 118 -15 357 267 147 31 chr17 77663642 77663709 -7774771 + L2 LINE L2 3026 3084 -229 1480 150 42 0 chr17 77663709 77663969 -7774511 - AluJb SINE Alu 0 312 42 357 267 147 31 chr17 77663969 77664159 -7774321 + L2 LINE L2 3084 3313 0 331 268 115 66 chr17 77664295 77664478 -7774002 + MIR SINE MIR 20 211 -51 945 108 0 0 chr17 77664823 77664952 -7773528 + FLAM_C SINE Alu 1 129 -14 904 132 29 0 chr17 77665461 77665597 -7772883 + AluSq/x SINE Alu 6 145 -167 2198 128 0 0 chr17 77665597 77665909 -7772571 + AluSx SINE Alu 1 312 0 1384 195 7 34 chr17 77666398 77666696 -7771784 - AluJo SINE Alu -22 290 1 1306 128 198 12 chr17 77667366 77667609 -7770871 - AluJo SINE Alu -13 289 2 673 149 9 0 chr17 77667628 77667735 -7770745 - FLAM_C SINE Alu -34 109 2 706 170 18 0 chr17 77667793 77667905 -7770575 - AluJb SINE Alu -197 115 2 2434 63 0 3 chr17 77668303 77668602 -7769878 - AluY SINE Alu -13 298 1 932 323 84 18 chr17 77669321 77670064 -7768416 - L2 LINE L2 0 3313 2503 2017 143 0 0 chr17 77670084 77670378 -7768102 + AluSx SINE Alu 3 296 -16 204 158 0 0 chr17 77670434 77670472 -7768008 + (CA)n Simple_repeat Simple_repeat 2 39 0 717 264 38 42 chr17 77670495 77670703 -7767777 + MIR SINE MIR 21 229 -33 2187 193 80 23 chr17 77670703 77671180 -7767300 - MLT1D LTR MaLR -1 504 1 717 264 38 42 chr17 77671180 77671210 -7767270 + MIR SINE MIR 229 258 -4 242 342 72 0 chr17 77672759 77672870 -7765610 + MIR SINE MIR 29 147 -61 489 17 0 0 chr17 77673336 77673394 -7765086 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 1859 144 0 7 chr17 77673394 77673678 -7764802 - AluSq SINE Alu -29 284 3 1425 106 0 53 chr17 77675082 77675309 -7763171 + L1PA15 LINE L1 5938 6152 -13 2226 116 0 0 chr17 77675343 77675653 -7762827 - AluSg SINE Alu 0 310 1 1385 222 89 20 chr17 77675784 77676176 -7762304 + MLT1C LTR MaLR 6 424 -43 455 292 107 34 chr17 77676203 77676295 -7762185 + L2 LINE L2 2655 2739 -574 2010 124 0 3 chr17 77676295 77676651 -7761829 + AluSx SINE Alu 1 355 0 455 292 107 34 chr17 77676651 77676893 -7761587 + L2 LINE L2 2739 3031 -282 2073 104 0 35 chr17 77676895 77677212 -7761268 + AluSx SINE Alu 1 306 -6 2118 151 31 31 chr17 77677223 77677608 -7760872 + MLT1B LTR MaLR 6 390 0 365 302 8 32 chr17 77677705 77677831 -7760649 + L2 LINE L2 3191 3313 0 24 0 0 0 chr17 77677892 77677916 -7760564 + AT_rich Low_complexity Low_complexity 1 24 0 1688 166 35 0 chr17 77678022 77678306 -7760174 + AluSx SINE Alu 11 304 -8 884 155 18 18 chr17 77678306 77678474 -7760006 + AluSg/x SINE Alu 134 301 -11 229 234 0 78 chr17 77678805 77678882 -7759598 + MIR SINE MIR 113 183 -79 270 288 117 86 chr17 77679028 77679250 -7759230 + L2 LINE L2 3044 3272 0 190 309 0 44 chr17 77680050 77680118 -7758362 + MIR SINE MIR 148 212 -50 422 220 167 0 chr17 77681842 77681974 -7756506 - L1M4 LINE L1 -1253 4893 4740 1838 161 0 34 chr17 77682008 77682331 -7756149 - AluJb SINE Alu 0 312 1 2041 129 11 51 chr17 77682362 77682718 -7755762 + L1PA16 LINE L1 5825 6166 0 288 159 0 0 chr17 77682736 77682780 -7755700 - Alu SINE Alu -259 44 1 1645 99 0 0 chr17 77682884 77683130 -7755350 + AluSp SINE Alu 63 308 0 2797 184 16 5 chr17 77683305 77683870 -7754610 + L1P5 LINE L1 4872 5451 -703 2015 151 3 0 chr17 77683870 77684174 -7754306 + AluSx SINE Alu 1 305 -7 2797 184 16 5 chr17 77684174 77684291 -7754189 + L1P5 LINE L1 5451 5565 -589 1956 122 0 0 chr17 77684335 77684614 -7753866 + AluSx SINE Alu 34 312 0 1335 264 32 60 chr17 77684624 77685071 -7753409 + L1M4 LINE L1 3410 3868 -2278 2367 54 3 3 chr17 77685071 77685369 -7753111 + AluY SINE Alu 1 298 -13 2181 89 7 3 chr17 77685379 77685681 -7752799 + AluSc SINE Alu 1 303 -6 1335 264 32 60 chr17 77685681 77685873 -7752607 + L1M4 LINE L1 3877 4042 -2104 1457 171 13 56 chr17 77685998 77686303 -7752177 - AluJo SINE Alu -14 298 7 1558 119 9 0 chr17 77686521 77686768 -7751712 - AluSg/x SINE Alu 0 333 85 1146 127 0 0 chr17 77686770 77686928 -7751552 - AluSq SINE Alu -155 158 1 277 262 103 48 chr17 77687014 77687140 -7751340 - MIR SINE MIR -27 235 103 1262 225 28 31 chr17 77687875 77688097 -7750383 + MER33 DNA MER1_type 1 222 -2363 2030 106 40 23 chr17 77688097 77688398 -7750082 - AluSx SINE Alu -6 306 1 1262 225 28 31 chr17 77688398 77688416 -7750064 + MER33 DNA MER1_type 222 239 -2346 2257 119 0 0 chr17 77688416 77688728 -7749752 - AluSx SINE Alu 0 312 1 1262 225 28 31 chr17 77688728 77688811 -7749669 + MER33 DNA MER1_type 239 324 0 585 338 54 0 chr17 77688819 77689023 -7749457 + MIR SINE MIR 48 262 0 314 254 170 2 chr17 77691943 77692093 -7746387 + MIR3 SINE MIR 4 183 -67 201 250 0 78 chr17 77692952 77693029 -7745451 - MIR SINE MIR -102 106 59 477 318 23 6 chr17 77693846 77694022 -7744458 - MIR3 SINE MIR -10 198 20 232 162 15 15 chr17 77694446 77694514 -7743966 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 2288 87 3 10 chr17 77694697 77695007 -7743473 - AluSq SINE Alu -5 308 1 340 247 193 30 chr17 77695097 77695263 -7743217 - MIR3 SINE MIR 0 208 16 2204 113 3 3 chr17 77697398 77697707 -7740773 - AluSc SINE Alu 0 309 1 2079 116 14 0 chr17 77697707 77697999 -7740481 - AluSx SINE Alu -14 298 3 415 313 60 8 chr17 77698044 77698178 -7740302 + MER5A DNA MER1_type 15 155 -34 282 235 98 88 chr17 77698255 77698323 -7740157 - MER112 DNA MER1_type -11 249 183 323 23 23 0 chr17 77698323 77698367 -7740113 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1952 120 0 21 chr17 77698368 77698652 -7739828 - AluSx SINE Alu -34 278 1 282 235 98 88 chr17 77698652 77698785 -7739695 - MER112 DNA MER1_type -76 184 44 757 174 0 0 chr17 77698797 77698912 -7739568 + FLAM_C SINE Alu 15 129 -14 272 246 33 0 chr17 77702786 77702847 -7735633 + MIR SINE MIR 81 143 -65 485 291 103 20 chr17 77704448 77704651 -7733829 - MIR SINE MIR -22 240 21 272 62 0 0 chr17 77706561 77706609 -7731871 - AluSp SINE Alu 0 303 256 601 114 0 23 chr17 77706609 77706697 -7731783 - AluSp SINE Alu -143 170 85 2441 53 3 3 chr17 77706697 77706999 -7731481 - AluY SINE Alu -9 302 1 207 0 0 0 chr17 77706999 77707022 -7731458 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2034 113 0 3 chr17 77707022 77707304 -7731176 - AluSg SINE Alu -29 281 1 2086 137 0 3 chr17 77707324 77707637 -7730843 - AluJo SINE Alu 0 312 1 233 197 14 0 chr17 77708731 77708802 -7729678 + (CGGGA)n Simple_repeat Simple_repeat 2 73 0 252 304 109 22 chr17 77709029 77709167 -7729313 + L3 LINE CR1 1412 1561 -16 2286 68 20 0 chr17 77709786 77710079 -7728401 + AluSq SINE Alu 1 299 -14 2129 100 3 61 chr17 77710786 77711116 -7727364 - AluSq SINE Alu -2 311 1 1181 189 0 35 chr17 77713106 77713333 -7725147 + MER20 DNA MER1_type 1 219 0 1473 189 71 4 chr17 77713447 77713727 -7724753 - AluJo SINE Alu -13 299 1 626 326 69 53 chr17 77713974 77714256 -7724224 + L2 LINE L2 2831 3124 -148 1855 115 4 4 chr17 77714256 77714516 -7723964 - AluSx SINE Alu -52 260 1 626 326 69 53 chr17 77714516 77714666 -7723814 + L2 LINE L2 3124 3270 -2 2043 123 3 3 chr17 77714996 77715296 -7723184 + AluSx SINE Alu 1 300 -12 260 330 84 69 chr17 77715396 77715657 -7722823 - L2 LINE L2 -35 3237 2973 2332 91 7 0 chr17 77715867 77716175 -7722305 - AluSg SINE Alu 0 310 1 235 200 0 0 chr17 77716428 77716473 -7722007 - L2 LINE L2 -671 2643 2599 791 158 82 16 chr17 77716937 77717120 -7721360 + L1MB7 LINE L1 5990 6184 0 2748 16 0 0 chr17 77719489 77719796 -7718684 + AluYb8 SINE Alu 1 307 -11 2241 95 0 7 chr17 77719946 77720242 -7718238 - AluSg SINE Alu -16 294 1 1895 137 3 44 chr17 77721397 77721712 -7716768 + AluSx SINE Alu 1 302 -10 2374 94 3 0 chr17 77721712 77722020 -7716460 + AluSq SINE Alu 1 309 -4 1255 133 0 10 chr17 77722089 77722284 -7716196 - AluJb SINE Alu 0 312 120 197 339 58 41 chr17 77722577 77722698 -7715782 + MIR3 SINE MIR 9 131 -77 180 0 0 0 chr17 77722921 77722941 -7715539 + (A)n Simple_repeat Simple_repeat 1 20 0 2467 50 0 0 chr17 77724013 77724311 -7714169 + AluY SINE Alu 1 298 -13 2079 149 0 0 chr17 77724317 77724626 -7713854 + AluSx SINE Alu 1 309 -3 28 29 0 0 chr17 77727841 77727876 -7710604 + GC_rich Low_complexity Low_complexity 1 35 0 250 152 22 0 chr17 77733958 77734004 -7704476 - Alu SINE Alu -255 47 1 1781 161 14 0 chr17 77734752 77735061 -7703419 - AluJb SINE Alu 0 313 1 2109 123 3 19 chr17 77735093 77735401 -7703079 - AluJo SINE Alu -9 303 1 351 290 47 0 chr17 77736855 77736962 -7701518 - MIR3 SINE MIR -20 188 77 1983 120 41 0 chr17 77738263 77738554 -7699926 + AluSg SINE Alu 1 303 -7 1962 154 0 6 chr17 77738565 77738876 -7699604 + AluJo SINE Alu 1 309 -3 210 71 0 0 chr17 77738884 77738912 -7699568 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 367 277 95 0 chr17 77738941 77739078 -7699402 - MIR SINE MIR -93 169 20 202 346 0 12 chr17 77740929 77741010 -7697470 + L2 LINE L2 2979 3058 -214 320 256 86 34 chr17 77741208 77741325 -7697155 - L2 LINE L2 -181 3091 2969 314 304 117 29 chr17 77741623 77741794 -7696686 - MIR SINE MIR -42 220 35 721 249 18 0 chr17 77742713 77742882 -7695598 + MER5A DNA MER1_type 18 189 0 263 269 15 15 chr17 77742882 77742941 -7695539 + MER5B DNA MER1_type 74 132 -46 249 291 39 0 chr17 77743045 77743148 -7695332 + L2 LINE L2 2553 2659 -655 986 229 39 64 chr17 77743198 77743556 -7694924 + L1MC5 LINE L1 7452 7800 -161 293 293 92 61 chr17 77743879 77744173 -7694307 + L2 LINE L2 2888 3190 -82 237 232 0 0 chr17 77745124 77745180 -7693300 + GA-rich Low_complexity Low_complexity 2 57 0 545 213 30 43 chr17 77745325 77745491 -7692989 + MIR3 SINE MIR 7 165 -43 348 317 88 77 chr17 77745576 77746188 -7692292 - L3 LINE CR1 -373 1204 586 2369 90 0 3 chr17 77746353 77746664 -7691816 - AluY SINE Alu -1 310 1 184 319 35 71 chr17 77746863 77746976 -7691504 - L2 LINE L2 -15 3257 3149 1335 224 31 19 chr17 77747604 77747921 -7690559 + MER33 DNA MER1_type 1 321 -3 200 292 155 25 chr17 77748691 77748852 -7689628 + L2 LINE L2 2894 3075 -197 188 231 0 0 chr17 77748999 77749038 -7689442 + L2 LINE L2 3189 3227 -86 234 0 0 0 chr17 77749768 77749794 -7688686 + (CGG)n Simple_repeat Simple_repeat 3 28 0 29 70 0 0 chr17 77749847 77749904 -7688576 + GC_rich Low_complexity Low_complexity 1 57 0 180 0 0 0 chr17 77751448 77751468 -7687012 + (CGGGGG)n Simple_repeat Simple_repeat 3 22 0 220 207 17 0 chr17 77751633 77751691 -7686789 + (CCCCG)n Simple_repeat Simple_repeat 2 60 0 181 188 167 0 chr17 77751799 77751847 -7686633 + MIR SINE MIR 46 101 -161 344 254 127 0 chr17 77753466 77753576 -7684904 + L2 LINE L2 3149 3272 0 183 268 36 0 chr17 77753650 77753706 -7684774 + L2 LINE L2 3214 3271 -1 356 308 142 40 chr17 77755014 77755443 -7683037 - L2 LINE L2 -5 3308 2836 2307 93 0 0 chr17 77756920 77757221 -7681259 + AluSx SINE Alu 11 311 -1 289 403 44 0 chr17 77757608 77757767 -7680713 + MIR SINE MIR 17 182 -80 295 240 0 62 chr17 77758111 77758207 -7680273 + MIR SINE MIR 18 107 -101 203 349 124 0 chr17 77758332 77758461 -7680019 + L2 LINE L2 2719 2863 -451 202 139 0 28 chr17 77758571 77758607 -7679873 + (TTCC)n Simple_repeat Simple_repeat 2 36 0 267 296 88 16 chr17 77759105 77759230 -7679250 - MER5A DNA MER1_type -19 170 37 486 303 125 33 chr17 77759276 77759733 -7678747 + L2 LINE L2 2776 3271 -1 256 340 162 20 chr17 77759727 77759924 -7678556 + MIR SINE MIR 16 240 -22 * 2292 104 0 0 chr17 77760119 77760426 -7678054 + AluSx SINE Alu 1 307 -5 1936 144 6 10 chr17 77760676 77760988 -7677492 - AluSx SINE Alu -1 311 1 666 146 115 18 chr17 77763600 77763765 -7674715 + MER96B DNA MER1_type? 3 183 -234 613 214 55 40 chr17 77763947 77764158 -7674322 - L1ME3A LINE L1 -3 6163 5955 1265 218 40 60 chr17 77764190 77764298 -7674182 + MER58B DNA MER1_type 1 110 -2310 1835 143 29 16 chr17 77764298 77764606 -7673874 - AluJb SINE Alu 0 312 1 1265 218 40 60 chr17 77764606 77764845 -7673635 + MER58B DNA MER1_type 110 341 0 305 283 87 11 chr17 77764845 77764937 -7673543 + L2 LINE L2 3189 3287 -26 459 285 136 25 chr17 77764977 77765212 -7673268 + MIR SINE MIR 2 262 0 871 186 149 4 chr17 77765733 77765975 -7672505 - LTR33 LTR ERVL -2 519 243 800 131 68 57 chr17 77766254 77766401 -7672079 + MER20 DNA MER1_type 42 193 -26 2140 108 3 3 chr17 77766401 77766696 -7671784 + AluSx SINE Alu 1 295 -17 800 131 68 57 chr17 77766696 77766724 -7671756 + MER20 DNA MER1_type 193 219 0 2223 114 0 3 chr17 77767211 77767519 -7670961 - AluSg SINE Alu -3 307 1 428 257 96 28 chr17 77768611 77768796 -7669684 - MIR SINE MIR -1 261 61 1775 150 17 3 chr17 77768925 77769212 -7669268 - AluJb SINE Alu -10 302 12 235 273 58 25 chr17 77769599 77769720 -7668760 + MIR3 SINE MIR 51 175 -33 1963 128 37 0 chr17 77770233 77770531 -7667949 - AluSx SINE Alu -3 309 1 234 207 35 81 chr17 77770668 77770755 -7667725 + L2 LINE L2 3188 3270 -2 1479 146 12 116 chr17 77771303 77771639 -7666841 + AluJb SINE Alu 1 301 -1 203 186 0 23 chr17 77771639 77771671 -7666809 + GA-rich Low_complexity Low_complexity 12 44 0 1988 118 7 3 chr17 77771828 77772117 -7666363 - AluSx SINE Alu -16 296 7 351 233 164 9 chr17 77772181 77772297 -7666183 - MIR SINE MIR -128 134 1 1927 114 29 48 chr17 77773540 77773855 -7664625 - AluSx SINE Alu -3 309 1 408 152 232 0 chr17 77774202 77774327 -7664153 + MER53 DNA DNA 5 158 -31 1409 119 71 140 chr17 77774333 77774602 -7663878 - MSTA LTR MaLR 0 428 193 2108 96 17 3 chr17 77774602 77774895 -7663585 - AluSx SINE Alu -15 297 1 1409 119 71 140 chr17 77774895 77775019 -7663461 - MSTA LTR MaLR -235 193 62 25 0 0 0 chr17 77775190 77775215 -7663265 + AT_rich Low_complexity Low_complexity 1 25 0 260 160 0 0 chr17 77775215 77775265 -7663215 - MSTA LTR MaLR -376 50 1 610 151 0 0 chr17 77775759 77775845 -7662635 + AluSp SINE Alu 1 86 -226 2434 66 0 0 chr17 77775845 77776146 -7662334 + AluY SINE Alu 1 301 -10 1451 129 30 0 chr17 77776146 77776376 -7662104 + AluSp SINE Alu 75 313 0 181 342 142 27 chr17 77776578 77776803 -7661677 + L2 LINE L2 2804 3054 -218 558 205 16 0 chr17 77776804 77776926 -7661554 - MER20 DNA MER1_type -4 215 92 1574 141 0 80 chr17 77776947 77777246 -7661234 - AluJo SINE Alu -9 303 29 226 167 21 0 chr17 77777265 77777313 -7661167 - MER20 DNA MER1_type -134 85 37 382 314 34 53 chr17 77777384 77777574 -7660906 + MIR SINE MIR 60 247 -15 2126 100 0 7 chr17 77777574 77777874 -7660606 - AluSc SINE Alu -11 298 1 382 314 34 53 chr17 77777874 77777890 -7660590 + MIR SINE MIR 247 262 0 188 356 56 0 chr17 77777894 77777984 -7660496 + L2 LINE L2 3123 3217 -55 261 0 0 0 chr17 77778015 77778044 -7660436 + (CA)n Simple_repeat Simple_repeat 1 29 0 504 220 31 13 chr17 77778059 77778218 -7660262 + L1MD2 LINE L1 6197 6358 -1 21 36 0 0 chr17 77778253 77778281 -7660199 + AT_rich Low_complexity Low_complexity 1 28 0 210 152 0 61 chr17 77779416 77779464 -7659016 + (CAAA)n Simple_repeat Simple_repeat 2 47 -16 2093 110 3 16 chr17 77779464 77779772 -7658708 + AluSx SINE Alu 1 304 -8 210 152 0 61 chr17 77779772 77779789 -7658691 + (CAAA)n Simple_repeat Simple_repeat 47 63 0 383 295 8 39 chr17 77779889 77780018 -7658462 - MIR SINE MIR -62 200 76 656 131 0 10 chr17 77780025 77780124 -7658356 - AluJb SINE Alu -201 111 14 226 256 156 22 chr17 77780742 77780832 -7657648 - MER5A DNA MER1_type -2 187 86 250 167 0 0 chr17 77780832 77780874 -7657606 + MER5A DNA MER1_type 147 188 -1 210 91 0 0 chr17 77780978 77781011 -7657469 + (T)n Simple_repeat Simple_repeat 1 33 0 1454 100 0 0 chr17 77781027 77781217 -7657263 - AluSx SINE Alu -122 190 1 199 358 42 0 chr17 77783986 77784081 -7654399 + L2 LINE L2 3136 3234 -38 1052 139 6 39 chr17 77784699 77784879 -7653601 - FRAM SINE Alu -6 170 1 2088 113 3 3 chr17 77785088 77785388 -7653092 + AluSq SINE Alu 1 300 -13 305 325 28 8 chr17 77785388 77785504 -7652976 - MIR3 SINE MIR -52 156 32 2227 100 0 0 chr17 77785525 77785815 -7652665 - AluSc SINE Alu -9 300 11 797 196 55 6 chr17 77786214 77786377 -7652103 + FRAM SINE Alu 6 176 0 198 348 51 38 chr17 77786439 77786755 -7651725 - L2 LINE L2 -438 2876 2557 758 178 12 0 chr17 77786765 77786928 -7651552 + L1ME3A LINE L1 5319 5483 -687 2395 99 0 0 chr17 77786934 77787246 -7651234 + AluSx SINE Alu 1 312 0 241 262 164 16 chr17 77787277 77787399 -7651081 + L1ME3A LINE L1 5636 5775 -395 1018 247 30 10 chr17 77787426 77787722 -7650758 + L1ME3A LINE L1 5861 6162 -8 2091 129 0 10 chr17 77787750 77788059 -7650421 - AluSx SINE Alu -4 308 3 342 206 15 15 chr17 77788586 77788681 -7649799 + MIR SINE MIR 38 132 -76 2141 93 3 35 chr17 77788718 77789030 -7649450 + AluSg SINE Alu 1 302 -8 286 242 15 0 chr17 77789031 77789097 -7649383 - Charlie7 DNA MER1_type -2510 102 36 244 133 22 0 chr17 77789431 77789476 -7649004 - L2 LINE L2 -5 3308 3263 485 178 10 10 chr17 77789626 77789727 -7648753 - MLT1J2 LTR MaLR 0 450 350 521 227 43 21 chr17 77789784 77789946 -7648534 - MLT1J2 LTR MaLR -241 205 39 313 233 29 68 chr17 77790216 77790319 -7648161 + L2 LINE L2 3174 3272 0 307 296 73 73 chr17 77791576 77791755 -7646725 + MIR SINE MIR 26 204 -58 275 302 166 53 chr17 77792212 77792381 -7646099 - MIR SINE MIR -23 239 52 2258 86 3 9 chr17 77792696 77793011 -7645469 + AluSp SINE Alu 1 313 0 411 98 0 0 chr17 77793057 77793118 -7645362 + (CA)n Simple_repeat Simple_repeat 1 61 0 2090 101 0 17 chr17 77793210 77793506 -7644974 + AluSx SINE Alu 7 297 -15 180 0 0 0 chr17 77793580 77793600 -7644880 + (CA)n Simple_repeat Simple_repeat 1 20 0 238 234 0 138 chr17 77794110 77794204 -7644276 + MIR SINE MIR 113 193 -69 748 271 20 41 chr17 77794570 77794814 -7643666 - MIR SINE MIR 0 262 24 436 264 74 20 chr17 77794936 77795084 -7643396 + MIR3 SINE MIR 39 194 -14 2095 118 0 0 chr17 77795336 77795652 -7642828 - AluSx SINE Alu 0 318 3 967 135 0 0 chr17 77795654 77795795 -7642685 - AluJ SINE Alu -6 306 166 9241 102 57 51 chr17 77795799 77798374 -7640106 - pTR5 LTR ERV1 0 8399 504 484 172 10 35 chr17 77798370 77798573 -7639907 - HERV17 LTR ERV1 -7726 900 703 * 25427 87 9 15 chr17 77798621 77803420 -7635060 + HERV9 LTR ERV1 1 4754 -1949 3252 91 154 151 chr17 77803418 77804311 -7634169 + pTR5 LTR ERV1 1537 2432 -6 * 826 191 7 0 chr17 77804320 77804456 -7634024 - AluJ SINE Alu -143 169 33 2074 49 0 0 chr17 77804466 77804710 -7633770 - AluY SINE Alu -7 304 61 323 244 0 94 chr17 77805151 77805278 -7633202 + MIR3 SINE MIR 93 207 -1 542 235 5 0 chr17 77806737 77806960 -7631520 + (CA)n Simple_repeat Simple_repeat 1 224 0 2199 89 31 0 chr17 77808395 77808688 -7629792 + AluSq SINE Alu 1 302 -11 338 324 21 71 chr17 77808758 77808996 -7629484 + MIR SINE MIR 22 247 -15 402 258 6 66 chr17 77809028 77809210 -7629270 + MER104 DNA Tc2 7 177 -3 21 57 0 0 chr17 77813021 77813056 -7625424 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr17 77813115 77813144 -7625336 + GC_rich Low_complexity Low_complexity 1 29 0 256 281 19 0 chr17 77815164 77815324 -7623156 + (TCCA)n Simple_repeat Simple_repeat 2 164 0 349 277 25 99 chr17 77816388 77816590 -7621890 + L1M4 LINE L1 3451 3637 -2509 2140 98 12 58 chr17 77816597 77816924 -7621556 - AluSx SINE Alu 0 312 1 1851 171 0 7 chr17 77817908 77818212 -7620268 + AluJb SINE Alu 1 302 -10 568 281 67 0 chr17 77818373 77818537 -7619943 - MIR SINE MIR -13 249 75 274 212 91 0 chr17 77818897 77818963 -7619517 + MIR3 SINE MIR 87 158 -50 2201 96 0 0 chr17 77819256 77819573 -7618907 - AluSx SINE Alu 0 317 1 286 192 0 0 chr17 77819604 77819656 -7618824 + L2 LINE L2 3262 3313 0 235 283 17 83 chr17 77819628 77819748 -7618732 - L2 LINE L2 -10 3262 3151 * 749 72 0 10 chr17 77819748 77819845 -7618635 + AluS SINE Alu 1 96 -216 1249 131 11 0 chr17 77819946 77820137 -7618343 + AluSq SINE Alu 112 304 -9 2220 99 7 10 chr17 77821605 77821907 -7616573 + AluSg SINE Alu 1 301 -9 281 300 82 18 chr17 77822600 77822710 -7615770 - MIR3 SINE MIR -36 172 56 180 219 110 55 chr17 77823888 77823961 -7614519 - MIR3 SINE MIR -7 201 125 1522 160 85 11 chr17 77824055 77824219 -7614261 - AluJo SINE Alu -9 303 153 306 0 0 0 chr17 77824219 77824253 -7614227 + (TG)n Simple_repeat Simple_repeat 1 34 0 1522 160 85 11 chr17 77824253 77824370 -7614110 - AluJo SINE Alu -159 153 1 492 181 8 27 chr17 77824401 77824521 -7613959 - MIR3 SINE MIR -30 178 63 1982 118 23 10 chr17 77824621 77824925 -7613555 + AluSq SINE Alu 1 308 -5 207 196 59 147 chr17 77826760 77826862 -7611618 - MIR SINE MIR -4 258 166 1996 129 3 7 chr17 77826886 77827188 -7611292 - AluJb SINE Alu -11 301 1 218 294 0 0 chr17 77827188 77827239 -7611241 - L2 LINE L2 -6 3307 3257 193 221 26 91 chr17 77827217 77827294 -7611186 - MIR SINE MIR -93 169 98 * 234 316 151 14 chr17 77828348 77828566 -7609914 - L2 LINE L2 -221 3051 2804 219 355 11 0 chr17 77828638 77828731 -7609749 - L2 LINE L2 -501 2813 2720 1756 175 0 19 chr17 77828809 77829117 -7609363 + AluJo SINE Alu 1 302 -10 1119 214 0 130 chr17 77829828 77830012 -7608468 - AluY SINE Alu 0 301 181 429 70 0 0 chr17 77830012 77830069 -7608411 + (CA)n Simple_repeat Simple_repeat 2 58 0 1119 214 0 130 chr17 77830069 77830230 -7608250 - AluY SINE Alu -120 181 1 2072 132 6 6 chr17 77830376 77830709 -7607771 + MER1B DNA MER1_type 1 333 -6 438 270 0 8 chr17 77830785 77830911 -7607569 - MER117 DNA MER1_type -72 125 1 385 286 149 41 chr17 77831382 77831408 -7607072 - L2 LINE L2 -211 3061 3039 1950 82 3 106 chr17 77831408 77831739 -7606741 - AluSg SINE Alu -13 297 1 385 286 149 41 chr17 77831739 77832239 -7606241 - L2 LINE L2 -233 3039 2457 2188 118 0 10 chr17 77832242 77832556 -7605924 + AluSq SINE Alu 1 311 -2 1824 230 20 55 chr17 77832562 77832766 -7605714 + MLT1G LTR MaLR 13 223 -367 1986 138 3 16 chr17 77832766 77833078 -7605402 - AluJo SINE Alu 0 312 5 1824 230 20 55 chr17 77833078 77833472 -7605008 + MLT1G LTR MaLR 223 590 0 194 367 167 20 chr17 77833499 77833804 -7604676 + L2 LINE L2 2518 2867 -447 22 35 0 0 chr17 77833840 77833869 -7604611 + AT_rich Low_complexity Low_complexity 1 29 0 2253 84 0 10 chr17 77833871 77834169 -7604311 + AluY SINE Alu 3 297 -14 2172 122 0 0 chr17 77834179 77834490 -7603990 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr17 77834490 77834511 -7603969 + AT_rich Low_complexity Low_complexity 1 21 0 1064 103 0 7 chr17 77834511 77834657 -7603823 - AluSq/x SINE Alu -168 145 1 22 0 0 0 chr17 77834844 77834866 -7603614 + AT_rich Low_complexity Low_complexity 1 22 0 333 0 0 0 chr17 77834910 77834947 -7603533 + (TA)n Simple_repeat Simple_repeat 2 38 0 32 43 0 0 chr17 77834949 77834995 -7603485 + GC_rich Low_complexity Low_complexity 1 46 0 2083 56 0 30 chr17 77834995 77835264 -7603216 - AluY SINE Alu -50 261 1 2187 116 0 3 chr17 77835657 77835967 -7602513 + AluY SINE Alu 1 309 -2 191 114 29 0 chr17 77836166 77836201 -7602279 + CT-rich Low_complexity Low_complexity 1 36 0 1778 173 16 0 chr17 77836241 77836547 -7601933 + AluJb SINE Alu 1 311 -1 312 186 88 0 chr17 77836556 77836658 -7601822 - L1ME LINE L1 -678 5488 5378 1797 161 0 17 chr17 77837009 77837300 -7601180 + AluJo SINE Alu 1 286 -26 216 143 0 0 chr17 77837303 77837345 -7601135 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 2107 110 0 19 chr17 77837350 77837658 -7600822 + AluSx SINE Alu 1 302 -10 404 186 70 0 chr17 77837736 77837822 -7600658 + MIR SINE MIR 69 160 -102 2273 71 0 0 chr17 77837882 77838162 -7600318 - AluSg SINE Alu -30 280 1 236 255 117 11 chr17 77838256 77838350 -7600130 + L2 LINE L2 3169 3272 0 29 70 0 0 chr17 77838871 77838928 -7599552 + GC_rich Low_complexity Low_complexity 1 57 0 1288 166 35 9 chr17 77843198 77843427 -7595053 - MER46A DNA MER2_type 0 236 2 21 0 0 0 chr17 77844530 77844551 -7593929 + AT_rich Low_complexity Low_complexity 1 21 0 423 328 26 32 chr17 77845568 77845757 -7592723 + MER5A DNA MER1_type 2 189 0 186 305 158 32 chr17 77847849 77848039 -7590441 + L2 LINE L2 3058 3271 -1 2095 151 0 0 chr17 77851682 77851993 -7586487 + AluJb SINE Alu 1 311 -1 2035 149 7 0 chr17 77852073 77852375 -7586105 + AluSx SINE Alu 1 304 -8 1786 130 33 47 chr17 77852384 77852683 -7585797 + AluJo SINE Alu 1 295 -17 186 290 65 54 chr17 77852855 77852948 -7585532 - MIR SINE MIR -149 113 20 2137 88 0 37 chr17 77854115 77854435 -7584045 - AluSx SINE Alu 0 309 1 264 284 134 0 chr17 77855381 77855508 -7582972 - L2 LINE L2 -7 3306 3163 318 225 159 32 chr17 77855697 77855876 -7582604 + MIR SINE MIR 30 221 -41 298 234 0 13 chr17 77856877 77856954 -7581526 + MLT1C LTR MaLR 389 464 -3 180 125 0 0 chr17 77857299 77857331 -7581149 + (T)n Simple_repeat Simple_repeat 1 32 0 267 369 62 8 chr17 77860663 77860793 -7577687 - MIR3 SINE MIR -67 141 5 197 336 51 22 chr17 77861702 77861839 -7576641 - L3 LINE CR1 -125 1452 1312 2216 108 0 0 chr17 77867933 77868230 -7570250 - AluSx SINE Alu -15 297 1 218 296 42 28 chr17 77868250 77868321 -7570159 - MIR SINE MIR -153 109 38 529 198 112 64 chr17 77869660 77869760 -7568720 - MER33 DNA MER1_type -2353 232 138 1903 96 39 0 chr17 77869760 77870020 -7568460 - AluSx SINE Alu -13 299 30 529 198 112 64 chr17 77870020 77870106 -7568374 - MER33 DNA MER1_type -2447 138 37 183 343 154 17 chr17 77871685 77871918 -7566562 - L3 LINE CR1 -5 1572 1308 * 355 284 69 9 chr17 77871907 77872023 -7566457 + L2 LINE L2 3150 3272 0 263 137 0 20 chr17 77872812 77872863 -7565617 + (TTCC)n Simple_repeat Simple_repeat 1 50 0 198 0 0 0 chr17 77873650 77873672 -7564808 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2008 90 34 0 chr17 77873679 77873947 -7564533 - AluSx SINE Alu -35 277 1 1282 171 41 16 chr17 77880242 77880488 -7557992 + AluJo SINE Alu 48 299 -13 466 301 169 13 chr17 77881931 77882167 -7556313 - L2 LINE L2 -4 3309 3037 196 326 79 0 chr17 77883075 77883164 -7555316 - L2 LINE L2 -2 3270 3175 924 278 121 50 chr17 77883201 77883963 -7554517 - L2 LINE L2 0 3313 2607 1711 76 0 25 chr17 77883963 77884200 -7554280 - AluY SINE Alu -6 305 75 924 278 121 50 chr17 77884200 77884224 -7554256 - L2 LINE L2 -706 2607 2586 2221 95 0 10 chr17 77884224 77884520 -7553960 - AluSx SINE Alu -10 302 10 924 278 121 50 chr17 77884520 77884598 -7553882 - L2 LINE L2 -727 2586 2381 629 300 126 36 chr17 77884606 77884988 -7553492 - L2 LINE L2 -1 3312 2966 2182 91 14 7 chr17 77884988 77885285 -7553195 + AluSx SINE Alu 1 299 -13 629 300 126 36 chr17 77885285 77885522 -7552958 - L2 LINE L2 -347 2966 1937 1943 106 12 70 chr17 77885537 77885868 -7552612 - AluSx SINE Alu 0 312 1 1789 142 3 45 chr17 77885906 77886215 -7552265 + AluSx SINE Alu 1 296 -16 1202 135 0 11 chr17 77887091 77887276 -7551204 + AluSp SINE Alu 129 311 -2 2027 129 0 13 chr17 77887287 77887423 -7551057 + AluSx SINE Alu 1 137 -175 2127 127 3 0 chr17 77887423 77887731 -7550749 + AluSx SINE Alu 1 309 -3 2027 129 0 13 chr17 77887731 77887897 -7550583 + AluSx SINE Alu 137 299 -13 2386 67 0 3 chr17 77888188 77888488 -7549992 - AluY SINE Alu -12 299 1 940 254 73 0 chr17 77888702 77888934 -7549546 - REP3 LTR ERV -35 527 279 887 108 0 114 chr17 77888934 77889100 -7549380 + AluJb SINE Alu 150 296 -16 988 198 125 36 chr17 77889131 77889379 -7549101 - REP3 LTR ERV -292 270 1 180 0 0 0 chr17 77890013 77890033 -7548447 + (T)n Simple_repeat Simple_repeat 1 20 0 1751 157 20 10 chr17 77891354 77891648 -7546832 + AluJo SINE Alu 1 297 -15 1433 97 202 0 chr17 77891651 77891899 -7546581 + AluSg SINE Alu 3 300 -10 2035 123 3 0 chr17 77892184 77892477 -7546003 - AluSx SINE Alu -17 295 2 2719 56 18 0 chr17 77892531 77892869 -7545611 + LTR14A LTR ERVK 1 344 0 1736 74 27 39 chr17 77892869 77893053 -7545427 + HERVK14 LTR ERVK 1 183 -5762 2443 42 3 22 chr17 77893053 77893365 -7545115 - AluY SINE Alu -5 306 1 1736 74 27 39 chr17 77893365 77893438 -7545042 + HERVK14 LTR ERVK 183 255 -5690 * 9083 69 9 1 chr17 77893419 77894626 -7543854 + HERVK14 LTR ERVK 186 1402 -4543 2210 101 23 0 chr17 77896616 77896922 -7541558 + AluSp SINE Alu 1 313 0 2053 124 7 3 chr17 77896932 77897239 -7541241 + AluJo SINE Alu 1 308 -4 2136 82 31 3 chr17 77897347 77897638 -7540842 + AluY SINE Alu 1 299 -12 1753 141 7 14 chr17 77898724 77899001 -7539479 - AluJo SINE Alu -26 286 12 1494 182 23 11 chr17 77899001 77899265 -7539215 - AluJo SINE Alu -45 267 1 2301 71 3 3 chr17 77899280 77899574 -7538906 - AluSg SINE Alu -16 294 1 2040 128 7 0 chr17 77899576 77899874 -7538606 - AluSg SINE Alu -10 300 1 1593 131 50 32 chr17 77899882 77900165 -7538315 - AluJo SINE Alu -24 288 1 24 32 0 0 chr17 77900169 77900200 -7538280 + AT_rich Low_complexity Low_complexity 1 31 0 317 217 104 35 chr17 77900449 77900524 -7537956 - L1ME4a LINE L1 -67 6054 5967 2360 86 0 0 chr17 77900524 77900828 -7537652 - AluSg1 SINE Alu -5 304 1 317 217 104 35 chr17 77900828 77900867 -7537613 - L1ME4a LINE L1 -154 5967 5932 2323 75 7 0 chr17 77900903 77901196 -7537284 - AluSq SINE Alu -18 295 1 232 226 0 19 chr17 77901348 77901401 -7537079 + (TATG)n Simple_repeat Simple_repeat 3 54 0 309 259 139 15 chr17 77902555 77902723 -7535757 - MIR SINE MIR -48 214 23 253 164 173 19 chr17 77905194 77905264 -7533216 - Charlie5 DNA MER1_type -5 2580 2522 2219 96 3 0 chr17 77905264 77905565 -7532915 + AluSx SINE Alu 1 302 -10 253 164 173 19 chr17 77905565 77905598 -7532882 - Charlie5 DNA MER1_type -63 2522 2461 356 221 13 0 chr17 77906272 77906349 -7532131 - L2 LINE L2 -2 3311 3234 2091 82 0 4 chr17 77906373 77906654 -7531826 + AluSg SINE Alu 2 281 -29 8913 48 18 1 chr17 77906700 77907753 -7530727 + MER11C LTR ERVK 1 1071 0 2123 108 0 16 chr17 77908112 77908249 -7530231 + AluSx SINE Alu 1 139 -173 2773 16 0 0 chr17 77908249 77908562 -7529918 + AluYb8 SINE Alu 1 313 -5 2123 108 0 16 chr17 77908562 77908730 -7529750 + AluSx SINE Alu 139 301 -11 2094 119 3 3 chr17 77909120 77909423 -7529057 - AluSx SINE Alu -9 303 1 1939 131 3 3 chr17 77909517 77909814 -7528666 - AluSx SINE Alu -15 297 1 739 136 0 0 chr17 77909853 77909963 -7528517 - AluSg/x SINE Alu -11 299 190 1433 95 0 0 chr17 77910801 77910990 -7527490 - 7SLRNA srpRNA srpRNA -88 232 44 1232 167 4 76 chr17 77911092 77911367 -7527113 - AluJb SINE Alu 0 312 58 1902 134 17 3 chr17 77911377 77911676 -7526804 - AluSx SINE Alu -9 303 1 316 253 36 12 chr17 77911771 77911849 -7526631 - L2 LINE L2 -2 3311 3231 2281 87 0 0 chr17 77911849 77912149 -7526331 - AluSx SINE Alu -12 300 1 371 290 94 7 chr17 77912279 77912417 -7526063 - MIR3 SINE MIR -44 164 15 497 234 33 29 chr17 77912747 77912940 -7525540 + L1ME1 LINE L1 5790 5999 -179 520 211 0 0 chr17 77912942 77913051 -7525429 + L1MA10 LINE L1 6226 6334 0 1705 168 0 27 chr17 77913429 77913727 -7524753 - AluJo SINE Alu -22 290 1 316 358 64 17 chr17 77913727 77913900 -7524580 - L1MC4 LINE L1 -204 7838 7658 246 285 31 46 chr17 77913923 77914053 -7524427 - L1MC5 LINE L1 -532 7429 7302 1601 169 16 52 chr17 77914262 77914433 -7524047 - AluJb SINE Alu -16 296 139 2336 92 0 13 chr17 77914433 77914749 -7523731 - AluSx SINE Alu 0 312 1 1601 169 16 52 chr17 77914749 77914884 -7523596 - AluJb SINE Alu -173 139 1 225 114 0 0 chr17 77914982 77915017 -7523463 + MIR SINE MIR 114 148 -60 185 318 102 0 chr17 77916108 77916196 -7522284 - L2 LINE L2 -37 3235 3139 524 269 47 29 chr17 77916347 77916518 -7521962 - MIR SINE MIR -71 191 18 239 294 88 22 chr17 77916581 77916717 -7521763 - L2 LINE L2 -182 3090 2946 1969 124 3 22 chr17 77916717 77916852 -7521628 + AluJb SINE Alu 5 141 -171 2044 130 3 7 chr17 77916852 77917160 -7521320 + AluSx SINE Alu 3 309 -3 1969 124 3 22 chr17 77917160 77917338 -7521142 + AluJb SINE Alu 141 312 0 248 221 0 15 chr17 77920658 77920726 -7517754 + C-rich Low_complexity Low_complexity 4 70 0 184 306 0 0 chr17 77921056 77921105 -7517375 - MIR SINE MIR -74 188 140 492 183 99 0 chr17 77921120 77921251 -7517229 - LTR16C LTR ERVL -71 420 277 562 310 18 40 chr17 77923413 77923639 -7514841 - MIR SINE MIR 0 262 42 409 167 0 0 chr17 77923723 77923789 -7514691 + AluJ/FLAM SINE Alu 1 66 -236 1293 118 0 0 chr17 77923789 77923975 -7514505 + AluY SINE Alu 110 295 -16 363 271 136 0 chr17 77924011 77924129 -7514351 + L2 LINE L2 3138 3271 -1 383 240 19 19 chr17 77924718 77924822 -7513658 - MIR SINE MIR -112 150 47 315 264 23 0 chr17 77924941 77925028 -7513452 + L2 LINE L2 3136 3224 -48 392 277 15 0 chr17 77925396 77925506 -7512974 + MER33 DNA MER1_type 1 100 -97 835 156 0 15 chr17 77925509 77925644 -7512836 + FLAM_C SINE Alu 1 133 0 1644 146 27 44 chr17 77925652 77925988 -7512492 + AluSx SINE Alu 1 331 0 21 0 0 0 chr17 77926054 77926075 -7512405 + AT_rich Low_complexity Low_complexity 1 21 0 986 180 6 0 chr17 77926078 77926261 -7512219 + AluSx SINE Alu 1 184 -128 11934 58 13 6 chr17 77926364 77926721 -7511759 + HERVK14 LTR ERVK 1463 1816 -4129 4969 77 54 1 chr17 77926721 77927374 -7511106 + LTR12 LTR ERV1 2 688 0 11934 58 13 6 chr17 77927374 77927481 -7510999 + HERVK14 LTR ERVK 1816 1921 -4024 2088 117 0 10 chr17 77927481 77927781 -7510699 + AluY SINE Alu 2 298 -13 11934 58 13 6 chr17 77927781 77928869 -7509611 + HERVK14 LTR ERVK 1921 3027 -2918 * 16252 47 13 16 chr17 77928862 77929803 -7508677 + HERVK14 LTR ERVK 3626 4568 -1377 2494 55 7 0 chr17 77929803 77930110 -7508370 + AluY SINE Alu 1 309 -2 16252 47 13 16 chr17 77930110 77930750 -7507730 + HERVK14 LTR ERVK 4568 5202 -743 2279 74 0 32 chr17 77930750 77931060 -7507420 - AluSp SINE Alu -13 300 1 16252 47 13 16 chr17 77931060 77931617 -7506863 + HERVK14 LTR ERVK 5202 5759 -186 285 226 0 16 chr17 77931617 77931679 -7506801 + MER41C LTR ERV1 1 61 -493 875 55 0 31 chr17 77931679 77931807 -7506673 + HERVK14 LTR ERVK 5822 5945 0 2877 55 0 0 chr17 77931810 77932154 -7506326 + LTR14A LTR ERVK 1 344 0 380 113 0 113 chr17 77932414 77932450 -7506030 + U6 snRNA snRNA 2 29 -78 2093 83 0 28 chr17 77932450 77932759 -7505721 + AluY SINE Alu 2 302 0 380 113 0 113 chr17 77932759 77932792 -7505688 + U6 snRNA snRNA 29 64 -43 460 232 100 105 chr17 77933271 77933390 -7505090 + MIR SINE MIR 14 133 -129 2077 125 16 0 chr17 77933390 77933695 -7504785 - AluSx SINE Alu -2 310 1 460 232 100 105 chr17 77933695 77933765 -7504715 + MIR SINE MIR 133 202 -60 21 0 0 0 chr17 77934742 77934763 -7503717 + AT_rich Low_complexity Low_complexity 1 21 0 879 97 0 76 chr17 77934765 77934909 -7503571 - FLAM_C SINE Alu 0 133 1 616 42 0 0 chr17 77935538 77935610 -7502870 + tRNA-Arg-AGG tRNA tRNA 1 72 -4 586 41 0 14 chr17 77936064 77936137 -7502343 - tRNA-Arg-AGG tRNA tRNA -4 72 1 407 92 92 0 chr17 77936488 77936553 -7501927 - tRNA-Arg-CGA tRNA tRNA -5 71 1 541 31 0 0 chr17 77936747 77936811 -7501669 + tRNA-Arg-CGA tRNA tRNA 1 64 -12 219 311 25 49 chr17 77938484 77938606 -7499874 + L3b LINE CR1 1286 1404 -179 2370 47 3 10 chr17 77939433 77939731 -7498749 - AluY SINE Alu -15 296 1 469 261 138 0 chr17 77939742 77939880 -7498600 + L2 LINE L2 3116 3272 0 2166 106 20 0 chr17 77939991 77940293 -7498187 - AluSg SINE Alu -1 309 2 194 204 41 0 chr17 77940477 77940526 -7497954 - L2 LINE L2 -85 3187 3137 274 274 19 57 chr17 77940785 77940891 -7497589 - MIR SINE MIR -1 261 160 273 309 124 0 chr17 77940939 77941036 -7497444 + L3b LINE CR1 1304 1412 -171 2075 122 0 0 chr17 77942058 77942070 -7496410 - AluSx SINE Alu -17 295 284 594 60 0 0 chr17 77942070 77942153 -7496327 + (TTATG)n Simple_repeat Simple_repeat 3 85 0 2075 122 0 0 chr17 77942153 77942435 -7496045 - AluSx SINE Alu -27 285 1 670 149 0 8 chr17 77942451 77942572 -7495908 - L1ME3A LINE L1 -5 6165 6046 893 126 69 17 chr17 77942579 77942754 -7495726 + L1MB3 LINE L1 6000 6183 0 840 180 66 49 chr17 77942754 77942937 -7495543 + AluJo SINE Alu 120 305 -7 598 234 0 0 chr17 77943013 77943137 -7495343 - FLAM_A SINE Alu -4 138 15 2306 81 0 13 chr17 77943140 77943447 -7495033 - AluY SINE Alu -8 303 1 955 220 75 25 chr17 77943448 77943480 -7495000 - L1ME3A LINE L1 -236 5934 5905 2212 188 65 12 chr17 77943480 77943960 -7494520 + MLT1D LTR MaLR 1 505 0 955 220 75 25 chr17 77943960 77944268 -7494212 - L1ME3A LINE L1 -265 5905 5577 953 269 35 57 chr17 77944268 77944640 -7493840 + LTR16A LTR ERVL 34 397 -53 369 145 14 0 chr17 77944675 77944744 -7493736 + LTR16A LTR ERVL 381 450 0 2109 114 7 3 chr17 77944779 77945078 -7493402 - AluSx SINE Alu -10 302 3 1036 239 3 51 chr17 77945079 77945177 -7493303 - L1ME3A LINE L1 -586 5578 5477 1844 150 3 31 chr17 77945177 77945497 -7492983 - AluJo SINE Alu -1 311 1 1036 239 3 51 chr17 77945497 77945757 -7492723 - L1ME3A LINE L1 -687 5477 5237 190 263 80 95 chr17 77946045 77946093 -7492387 - L2 LINE L2 0 3313 3266 1944 91 44 4 chr17 77946093 77946392 -7492088 - AluSx SINE Alu 0 310 1 190 263 80 95 chr17 77946392 77946479 -7492001 - L2 LINE L2 -47 3266 3179 351 44 0 0 chr17 77948467 77948512 -7489968 + (CA)n Simple_repeat Simple_repeat 2 46 0 209 361 0 0 chr17 77948550 77948611 -7489869 - L2 LINE L2 -9 3304 3244 2087 91 56 0 chr17 77948688 77948995 -7489485 - AluSx SINE Alu 0 312 1 226 269 221 29 chr17 77949448 77949552 -7488928 - L2 LINE L2 -30 3283 3160 2277 75 7 13 chr17 77950176 77950481 -7487999 + AluSp SINE Alu 1 303 -10 2517 59 0 0 chr17 77950491 77950797 -7487683 + AluY SINE Alu 1 306 -5 1292 146 15 5 chr17 77952336 77952542 -7485938 - AluSg/x SINE Alu -15 295 88 1360 197 12 72 chr17 77953663 77953870 -7484610 - AluJo SINE Alu -11 301 118 2117 80 0 7 chr17 77953870 77954144 -7484336 + AluSc SINE Alu 28 299 -10 1360 197 12 72 chr17 77954144 77954256 -7484224 - AluJo SINE Alu -194 118 1 423 139 28 0 chr17 77954261 77954333 -7484147 - AluJo SINE Alu -6 306 233 1154 155 17 0 chr17 77954333 77954514 -7483966 - AluJo SINE Alu -128 184 1 2158 120 13 0 chr17 77954546 77954854 -7483626 - AluSx SINE Alu 0 312 1 807 129 0 7 chr17 77955049 77955188 -7483292 - L1MB8 LINE L1 0 6178 6041 2248 119 0 0 chr17 77955213 77955525 -7482955 + AluSx SINE Alu 1 312 0 417 340 73 0 chr17 77955885 77956035 -7482445 + MIR3 SINE MIR 32 192 -16 2139 99 3 0 chr17 77956084 77956429 -7482051 - AluSx SINE Alu 0 346 1 286 310 40 0 chr17 77956559 77956659 -7481821 - L2 LINE L2 0 3313 3210 826 137 16 0 chr17 77956659 77956783 -7481697 + FLAM_C SINE Alu 2 127 -16 1034 99 112 7 chr17 77956798 77956950 -7481530 + AluSq SINE Alu 3 170 -143 2229 57 0 24 chr17 77956992 77957288 -7481192 + AluY SINE Alu 3 291 -20 335 169 17 0 chr17 77957336 77957395 -7481085 - FAM SINE Alu -60 115 56 229 139 0 0 chr17 77957421 77957464 -7481016 - Alu SINE Alu 0 133 91 684 150 125 0 chr17 77957465 77957585 -7480895 + FAM SINE Alu 40 174 -11 474 301 89 12 chr17 77957585 77957831 -7480649 - L2 LINE L2 -97 3216 2952 309 26 0 0 chr17 77958341 77958379 -7480101 + (CA)n Simple_repeat Simple_repeat 1 38 0 884 133 0 22 chr17 77958860 77958995 -7479485 - FLAM_C SINE Alu -1 132 1 1682 152 72 0 chr17 77959077 77959354 -7479126 + AluJb SINE Alu 13 309 -3 2273 77 0 10 chr17 77959354 77959651 -7478829 - AluY SINE Alu -16 295 2 2276 85 0 22 chr17 77959687 77960005 -7478475 + AluY SINE Alu 1 311 0 2039 153 0 0 chr17 77960011 77960318 -7478162 + AluSx SINE Alu 6 312 0 354 361 4 78 chr17 77960699 77960943 -7477537 - L2 LINE L2 -3 3269 3044 488 303 164 0 chr17 77961412 77961620 -7476860 - MIR SINE MIR -1 261 20 588 238 104 0 chr17 77961690 77961883 -7476597 - LTR33 LTR ERVL 0 521 309 428 245 57 52 chr17 77961920 77962112 -7476368 - LTR33 LTR ERVL -312 209 17 353 264 28 19 chr17 77964993 77965099 -7473381 - L2 LINE L2 -60 3253 3147 1800 144 21 11 chr17 77965189 77965474 -7473006 + AluJo SINE Alu 1 288 -24 338 164 112 97 chr17 77965486 77965620 -7472860 + MER106B DNA MER1_type 923 1058 -1 1680 111 122 7 chr17 77966184 77966454 -7472026 + AluSg SINE Alu 1 301 -9 1261 74 6 0 chr17 77966543 77966706 -7471774 + AluY SINE Alu 127 290 -21 1981 134 3 0 chr17 77967144 77967435 -7471045 + AluSx SINE Alu 1 292 -20 1735 116 0 71 chr17 77968771 77969065 -7469415 + AluSx SINE Alu 1 273 -39 2000 131 0 7 chr17 77969391 77969673 -7468807 + AluSx SINE Alu 1 280 -32 270 0 0 0 chr17 77969675 77969705 -7468775 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 31 0 0 0 chr17 77969765 77969796 -7468684 + AT_rich Low_complexity Low_complexity 1 31 0 1621 145 55 28 chr17 77969858 77970147 -7468333 - AluJb SINE Alu -15 297 1 482 256 101 18 chr17 77970161 77970329 -7468151 + MIR SINE MIR 81 262 0 1581 147 66 25 chr17 77970853 77971139 -7467341 + AluJo SINE Alu 1 298 -14 815 218 82 0 chr17 77971297 77971503 -7466977 - MER33 DNA MER1_type -101 223 1 317 247 0 0 chr17 77971908 77971981 -7466499 + MIR3 SINE MIR 101 173 -35 231 214 0 0 chr17 77974581 77974637 -7463843 - Charlie5 DNA MER1_type -151 2461 2406 2160 103 7 0 chr17 77974737 77975038 -7463442 - AluY SINE Alu -8 303 1 2280 92 0 0 chr17 77975437 77975743 -7462737 - AluY SINE Alu -5 306 1 1299 77 6 0 chr17 77976385 77976554 -7461926 + AluY SINE Alu 1 170 -141 1090 149 0 0 chr17 77976586 77976760 -7461720 + AluYa5 SINE Alu 134 307 -4 252 0 0 0 chr17 77976946 77976974 -7461506 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 465 227 189 54 chr17 77977131 77977291 -7461189 + L1MC5 LINE L1 7715 7905 -56 2147 113 7 0 chr17 77977291 77977591 -7460889 - AluSq SINE Alu -11 302 1 465 227 189 54 chr17 77977591 77977615 -7460865 + L1MC5 LINE L1 7905 7924 -37 315 0 0 0 chr17 77978271 77978306 -7460174 + (TG)n Simple_repeat Simple_repeat 2 36 0 406 308 47 44 chr17 77978865 77979069 -7459411 + MIR SINE MIR 18 226 -36 2206 68 16 45 chr17 77979105 77979416 -7459064 - AluY SINE Alu -9 302 1 2338 82 0 0 chr17 77979423 77979717 -7458763 - AluSx SINE Alu -18 294 1 2283 70 0 0 chr17 78030632 78030918 -7407562 + AluYa5 SINE Alu 1 286 -25 422 36 18 0 chr17 78030919 78030975 -7407505 + (TA)n Simple_repeat Simple_repeat 2 58 0 1051 142 6 0 chr17 78031172 78031334 -7407146 - FRAM SINE Alu -5 171 9 1991 124 0 0 chr17 78031360 78031670 -7406810 + AluSx SINE Alu 1 310 0 1921 135 0 3 chr17 78031675 78031972 -7406508 + AluSx SINE Alu 1 296 -16 2020 114 3 0 chr17 78031978 78032267 -7406213 + AluSg SINE Alu 3 292 -18 661 153 0 36 chr17 78032268 78032379 -7406101 - AluJo/FLAM SINE Alu -179 133 27 2078 114 3 10 chr17 78032983 78033291 -7405189 - AluSp SINE Alu -7 306 1 1320 187 46 11 chr17 78033479 78033763 -7404717 + AluJo SINE Alu 1 294 -18 512 322 0 33 chr17 78033998 78034181 -7404299 - MER5B DNA MER1_type 0 178 2 2006 115 0 0 chr17 78034199 78034485 -7403995 - AluSg SINE Alu -24 286 1 1649 86 5 0 chr17 78034538 78034759 -7403721 + MER41B LTR ERV1 1 222 -413 1368 79 0 0 chr17 78034765 78034942 -7403538 + AluY SINE Alu 128 304 -7 383 148 16 0 chr17 78034942 78035003 -7403477 + MER41A LTR ERV1 370 431 -123 980 115 7 0 chr17 78035304 78035450 -7403030 - AluSg/x SINE Alu -15 294 154 273 286 0 0 chr17 78035434 78035504 -7402976 + AluJb SINE Alu 193 262 -40 * 787 198 35 64 chr17 78035492 78035694 -7402786 + AluJo SINE Alu 85 280 -32 248 167 83 0 chr17 78035714 78035774 -7402706 + Tigger1 DNA MER2_type 2232 2296 -122 1095 204 29 15 chr17 78035777 78035983 -7402497 - AluJb SINE Alu -18 294 86 663 174 0 41 chr17 78035983 78036104 -7402376 + Tigger1 DNA MER2_type 2302 2417 -1 2316 105 7 3 chr17 78036310 78036614 -7401866 + AluSx SINE Alu 3 307 -5 2433 80 0 3 chr17 78036617 78036919 -7401561 + AluY SINE Alu 1 301 -10 1418 94 0 11 chr17 78036921 78037102 -7401378 + AluSq SINE Alu 5 183 -130 2534 57 7 0 chr17 78037320 78037617 -7400863 + AluY SINE Alu 1 299 -12 2374 87 0 10 chr17 78037814 78038125 -7400355 + AluY SINE Alu 1 308 -3 1123 169 119 15 chr17 78038132 78038266 -7400214 + AluSx SINE Alu 1 120 -182 2038 138 3 16 chr17 78038266 78038577 -7399903 + AluSp SINE Alu 1 307 -6 1452 204 21 11 chr17 78038579 78038863 -7399617 + AluJb SINE Alu 1 287 -25 1123 169 119 15 chr17 78038863 78038986 -7399494 + AluSx SINE Alu 120 288 -14 1682 113 124 19 chr17 78039109 78039374 -7399106 + AluSq SINE Alu 1 293 -20 2230 111 17 7 chr17 78040680 78040977 -7397503 - AluSq SINE Alu -13 300 1 1452 195 3 48 chr17 78041010 78041323 -7397157 + AluJo SINE Alu 1 299 -13 896 144 0 0 chr17 78041329 78041454 -7397026 + AluSx SINE Alu 1 125 -188 1701 144 0 0 chr17 78041458 78041715 -7396765 - AluY SINE Alu -14 297 41 492 275 0 0 chr17 78041733 78041853 -7396627 + C-rich Low_complexity Low_complexity 1 120 0 832 135 0 23 chr17 78042000 78042133 -7396347 - AluYb8 SINE Alu -188 130 1 1206 138 0 0 chr17 78042147 78042314 -7396166 + AluSx SINE Alu 131 297 -15 1855 107 48 71 chr17 78042323 78042633 -7395847 + AluSx SINE Alu 1 303 -9 2293 115 0 0 chr17 78042740 78043044 -7395436 + AluSc SINE Alu 1 304 -5 1907 91 0 16 chr17 78043067 78043320 -7395160 + AluSg SINE Alu 50 298 -12 1289 114 6 0 chr17 78043574 78043750 -7394730 - AluSp SINE Alu -7 306 130 1306 112 0 16 chr17 78043800 78043987 -7394493 + AluSg/x SINE Alu 122 305 -7 1723 128 16 70 chr17 78044462 78044774 -7393706 - AluSx SINE Alu -15 297 3 1818 145 19 52 chr17 78044776 78044938 -7393542 - AluSx SINE Alu -12 300 151 2211 66 52 3 chr17 78044938 78045224 -7393256 - AluSp SINE Alu -12 301 2 1818 145 19 52 chr17 78045224 78045371 -7393109 - AluSx SINE Alu -161 151 1 1572 199 14 14 chr17 78045622 78045904 -7392576 - AluJo SINE Alu -20 292 11 1561 177 7 7 chr17 78045928 78046205 -7392275 - AluJb SINE Alu -15 297 21 2021 143 0 7 chr17 78046557 78046857 -7391623 + AluSx SINE Alu 1 298 -14 402 187 19 37 chr17 78046907 78047014 -7391466 + AluJb SINE Alu 208 312 0 2006 123 13 7 chr17 78047433 78047733 -7390747 - AluSq SINE Alu -11 302 1 2279 114 7 3 chr17 78047764 78048070 -7390410 - AluSx SINE Alu -5 307 1 2333 122 0 0 chr17 78048072 78048383 -7390097 - AluSx SINE Alu -1 311 1 1621 135 12 0 chr17 78048498 78048743 -7389737 - AluY SINE Alu -19 292 45 1875 131 22 0 chr17 78048791 78049059 -7389421 + AluSx SINE Alu 3 276 -36 183 42 0 0 chr17 78049064 78049088 -7389392 + (CAA)n Simple_repeat Simple_repeat 1 24 0 196 294 185 34 chr17 78049189 78049308 -7389172 + L2 LINE L2 3172 3308 -5 1834 133 60 18 chr17 78049352 78049637 -7388843 + AluSx SINE Alu 1 297 -15 1255 115 11 6 chr17 78049654 78049837 -7388643 + AluSg/x SINE Alu 120 303 -9 2090 137 7 13 chr17 78049847 78050154 -7388326 + AluSq SINE Alu 1 305 -8 2197 115 13 26 chr17 78050154 78050465 -7388015 + AluSx SINE Alu 1 308 -4 800 206 0 36 chr17 78050467 78050632 -7387848 + AluJo/FRAM SINE Alu 142 300 -12 2345 82 13 7 chr17 78050683 78050986 -7387494 + AluSc SINE Alu 1 305 -4 927 226 32 0 chr17 78051017 78051207 -7387273 - AluJ SINE Alu -10 302 107 469 103 0 0 chr17 78051211 78051279 -7387201 + Alu SINE Alu 2 69 -241 1060 118 0 0 chr17 78051279 78051423 -7387057 + AluSp/q SINE Alu 157 300 -13 306 121 379 0 chr17 78051425 78051491 -7386989 - AluJ SINE Alu -187 115 25 2251 121 3 0 chr17 78051698 78051996 -7386484 + AluSx SINE Alu 2 300 -12 1618 164 59 11 chr17 78052110 78052396 -7386084 - AluSg SINE Alu -10 300 1 1691 128 109 0 chr17 78052510 78052784 -7385696 + AluSx SINE Alu 1 304 -8 261 0 0 0 chr17 78052843 78052872 -7385608 + (A)n Simple_repeat Simple_repeat 1 29 0 2113 117 27 17 chr17 78052886 78053186 -7385294 + AluSq SINE Alu 6 308 -5 21 36 0 0 chr17 78053252 78053280 -7385200 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr17 78055086 78055112 -7383368 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 23 78 0 0 chr17 78055117 78055168 -7383312 + GC_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr17 78055592 78055615 -7382865 + GC_rich Low_complexity Low_complexity 1 23 0 2417 66 30 0 chr17 78055899 78056200 -7382280 - AluY SINE Alu -1 310 1 825 323 184 13 chr17 78056523 78057233 -7381247 + L2 LINE L2 1698 2529 -785 2487 73 10 0 chr17 78057383 78057684 -7380796 + AluSp SINE Alu 1 304 -9 928 73 0 0 chr17 78057709 78057819 -7380661 + AluSq/x SINE Alu 1 110 -203 878 60 0 0 chr17 78057822 78057922 -7380558 + AluSq/x SINE Alu 11 110 -202 2268 105 0 20 chr17 78057925 78058230 -7380250 + AluSx SINE Alu 11 309 -3 322 93 0 0 chr17 78058289 78058343 -7380137 - Alu SINE Alu -2 299 246 2438 73 0 10 chr17 78058548 78058850 -7379630 - AluSq SINE Alu -14 299 1 2223 96 0 0 chr17 78059063 78059343 -7379137 - AluSq SINE Alu -33 280 1 1010 107 0 0 chr17 78059345 78059476 -7379004 - AluSq/x SINE Alu -181 132 2 189 107 0 0 chr17 78059576 78059604 -7378876 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 628 142 85 0 chr17 78059803 78059909 -7378571 + FLAM_C SINE Alu 2 116 -27 225 0 0 0 chr17 78059914 78059939 -7378541 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 1067 194 15 63 chr17 78059941 78060034 -7378446 + L1MC2 LINE L1 5660 5756 -412 2252 97 0 17 chr17 78060034 78060332 -7378148 - AluSg SINE Alu -17 293 1 1067 194 15 63 chr17 78060332 78060542 -7377938 + L1MC2 LINE L1 5756 5943 -225 862 134 0 22 chr17 78060604 78060738 -7377742 + FLAM_C SINE Alu 11 141 -2 2479 61 10 0 chr17 78060738 78061031 -7377449 + AluY SINE Alu 1 296 -15 344 244 63 31 chr17 78061041 78061168 -7377312 - MIR3 SINE MIR -2 206 76 2261 111 16 0 chr17 78062053 78062360 -7376120 - AluSx SINE Alu 0 312 1 2328 112 0 0 chr17 78062372 78062666 -7375814 - AluSq SINE Alu -18 295 2 905 200 24 47 chr17 78062761 78063016 -7375464 + L1M4 LINE L1 4850 5098 -1048 880 174 163 37 chr17 78063018 78063208 -7375272 + AluJo SINE Alu 1 214 -98 599 137 29 10 chr17 78063208 78063310 -7375170 - AluSq/x SINE Alu -207 105 2 234 0 0 0 chr17 78063425 78063451 -7375029 + (A)n Simple_repeat Simple_repeat 1 26 0 2372 92 7 0 chr17 78063455 78063749 -7374731 + AluSx SINE Alu 1 296 -16 2077 140 0 26 chr17 78063752 78064060 -7374420 + AluSx SINE Alu 1 300 -12 2185 123 0 10 chr17 78064060 78064361 -7374119 + AluSg SINE Alu 1 298 -12 1930 154 7 3 chr17 78064373 78064666 -7373814 + AluJb SINE Alu 1 294 -18 441 172 5 172 chr17 78064667 78064734 -7373746 + L1MC5 LINE L1 7308 7384 -577 2214 136 0 0 chr17 78064734 78065044 -7373436 + AluSx SINE Alu 1 310 -2 441 172 5 172 chr17 78065044 78065174 -7373306 + L1MC5 LINE L1 7384 7472 -489 821 203 12 0 chr17 78065178 78065341 -7373139 - FAM SINE Alu -10 165 1 278 227 0 31 chr17 78065356 78065453 -7373027 + A-rich Low_complexity Low_complexity 2 95 0 2232 113 10 0 chr17 78065508 78065801 -7372679 - AluSx SINE Alu -16 296 1 2404 57 40 3 chr17 78065869 78066166 -7372314 + AluY SINE Alu 1 308 -3 2288 111 0 3 chr17 78066188 78066486 -7371994 + AluSx SINE Alu 1 297 -15 1696 106 8 4 chr17 78066486 78066722 -7371758 + AluSp SINE Alu 76 313 0 498 273 45 36 chr17 78066866 78067086 -7371394 + L1MC5 LINE L1 7705 7926 -35 201 274 51 128 chr17 78068768 78069002 -7369478 - L2 LINE L2 -231 3041 2826 2227 110 0 0 chr17 78069037 78069354 -7369126 - AluSx SINE Alu 0 312 1 555 233 38 62 chr17 78069644 78069812 -7368668 - L2 LINE L2 -1 3312 3148 1762 149 38 7 chr17 78069812 78070100 -7368380 + AluJo SINE Alu 2 298 -14 555 233 38 62 chr17 78070100 78070141 -7368339 - L2 LINE L2 -165 3148 3108 947 134 8 0 chr17 78070162 78070296 -7368184 - AluJo SINE Alu -177 135 1 385 183 0 0 chr17 78070298 78070369 -7368111 - L2 LINE L2 -231 3082 3012 252 320 0 0 chr17 78071284 78071359 -7367121 - MIR SINE MIR -90 118 44 512 300 68 23 chr17 78071421 78071641 -7366839 - MIR SINE MIR -2 260 31 247 139 0 0 chr17 78071803 78071839 -7366641 + AluJo SINE Alu 1 36 -267 626 124 0 0 chr17 78071841 78071938 -7366542 + AluJb SINE Alu 201 297 -15 1660 164 21 14 chr17 78071990 78072270 -7366210 + AluJo SINE Alu 12 293 -19 2082 160 0 3 chr17 78072273 78072586 -7365894 + AluJb SINE Alu 1 312 0 2388 98 0 0 chr17 78072797 78073093 -7365387 - AluSg SINE Alu -14 296 1 2075 121 3 7 chr17 78073093 78073382 -7365098 - AluSg SINE Alu -22 288 1 203 0 37 0 chr17 78073859 78073886 -7364594 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 2348 74 0 7 chr17 78073887 78074198 -7364282 - AluY SINE Alu 0 309 1 212 0 36 0 chr17 78074198 78074226 -7364254 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 397 60 0 0 chr17 78074226 78074276 -7364204 - AluSc SINE Alu -19 280 231 23 33 0 0 chr17 78074303 78074333 -7364147 + AT_rich Low_complexity Low_complexity 1 30 0 2425 71 13 7 chr17 78074333 78074642 -7363838 - AluY SINE Alu 0 311 1 2238 102 7 10 chr17 78074644 78074947 -7363533 - AluSq SINE Alu -11 302 1 1796 133 63 0 chr17 78074957 78075227 -7363253 - AluJb SINE Alu -24 288 2 2169 124 6 19 chr17 78075486 78075801 -7362679 - AluSx SINE Alu -1 311 1 1352 158 12 55 chr17 78075996 78076249 -7362231 - AluJo SINE Alu 0 312 71 1411 125 30 142 chr17 78076268 78076461 -7362019 - AluSx SINE Alu -1 301 161 1702 108 5 0 chr17 78076461 78076683 -7361797 - AluSg SINE Alu -87 223 1 1411 125 30 142 chr17 78076683 78076826 -7361654 - AluSx SINE Alu -141 161 3 1986 158 0 13 chr17 78076828 78077131 -7361349 - AluJb SINE Alu -13 299 1 1000 198 134 9 chr17 78077189 78077406 -7361074 + AluJb SINE Alu 54 297 -15 2126 125 3 3 chr17 78077409 78077713 -7360767 + AluSg SINE Alu 1 304 -6 360 208 0 0 chr17 78077980 78078057 -7360423 - HAL1 LINE L1 -110 2397 2321 832 119 0 0 chr17 78078057 78078175 -7360305 + AluJo/FLAM SINE Alu 1 118 -184 2177 111 0 3 chr17 78078176 78078515 -7359965 - AluSx SINE Alu 0 338 1 279 302 104 22 chr17 78078526 78078708 -7359772 - L1MC/D LINE L1 -1992 5816 5620 588 134 143 34 chr17 78080086 78080205 -7358275 - FLAM_C SINE Alu 0 133 2 2356 70 0 30 chr17 78080232 78080531 -7357949 + AluY SINE Alu 1 290 -21 1983 134 0 0 chr17 78080551 78080819 -7357661 + AluSx SINE Alu 5 272 -40 210 67 0 0 chr17 78080901 78080915 -7357565 + (TA)n Simple_repeat Simple_repeat 1 14 -16 2517 65 7 3 chr17 78080915 78081221 -7357259 - AluSq SINE Alu -6 307 1 210 67 0 0 chr17 78081221 78081236 -7357244 + (TA)n Simple_repeat Simple_repeat 13 30 0 2014 86 17 66 chr17 78081236 78081538 -7356942 - AluSq SINE Alu -24 289 3 375 284 108 27 chr17 78081853 78081920 -7356560 - L1ME4a LINE L1 -12 6109 6049 2206 130 0 13 chr17 78081920 78082236 -7356244 + AluJo SINE Alu 1 312 0 375 284 108 27 chr17 78082236 78082390 -7356090 - L1ME4a LINE L1 -72 6049 5870 797 165 0 0 chr17 78082419 78082552 -7355928 - FLAM_A SINE Alu 0 133 1 2199 130 0 3 chr17 78083151 78083452 -7355028 + AluSx SINE Alu 1 300 -12 22 70 0 0 chr17 78086018 78086061 -7352419 + GC_rich Low_complexity Low_complexity 1 43 0 1774 146 3 58 chr17 78087328 78087657 -7350823 + AluJb SINE Alu 1 311 -1 2111 93 10 23 chr17 78088179 78088489 -7349991 - AluSq SINE Alu -7 306 1 2244 100 0 25 chr17 78088503 78088823 -7349657 - AluSx SINE Alu 0 312 1 225 305 199 0 chr17 78090039 78090180 -7348300 + MIR SINE MIR 73 241 -21 262 129 125 41 chr17 78090700 78090779 -7347701 + MIR SINE MIR 70 155 -63 882 126 0 30 chr17 78091732 78091867 -7346613 + AluJo/FLAM SINE Alu 3 133 -169 2175 111 13 0 chr17 78091867 78092174 -7346306 + AluSx SINE Alu 1 311 -1 1312 103 0 73 chr17 78092311 78092545 -7345935 + AluSq SINE Alu 97 313 0 237 317 72 33 chr17 78092590 78092770 -7345710 - L2 LINE L2 -9 3304 3118 * 254 367 46 0 chr17 78092761 78092870 -7345610 - L2 LINE L2 -9 3263 3150 1889 126 38 0 chr17 78093010 78093303 -7345177 - AluSx SINE Alu -8 304 1 1663 149 17 14 chr17 78093304 78093600 -7344880 - AluJo SINE Alu -10 302 6 180 293 133 13 chr17 78095070 78095145 -7343335 - MIR SINE MIR -106 102 19 1726 173 7 10 chr17 78097031 78097337 -7341143 - AluJo SINE Alu -7 305 1 2217 64 0 3 chr17 78097972 78098254 -7340226 + AluY SINE Alu 22 302 -9 1850 166 0 7 chr17 78098511 78098819 -7339661 - AluSx SINE Alu -6 306 1 1452 176 110 61 chr17 78098923 78099350 -7339130 - LTR7 LTR ERV1 -2 448 1 2239 99 72 47 chr17 78099350 78099938 -7338542 - HERVH LTR ERV1 0 7713 5600 4162 143 11 1 chr17 78099939 78100595 -7337885 - HERVH LTR ERV1 -2564 5149 4488 3186 116 8 6 chr17 78100597 78101098 -7337382 - HERVH LTR ERV1 -3720 3993 3492 892 153 61 0 chr17 78101073 78101236 -7337244 - HERVH LTR ERV1 -4401 3312 3140 * 18903 94 43 19 chr17 78101230 78104147 -7334333 - HERVH LTR ERV1 -4726 2987 1 1444 167 111 72 chr17 78104149 78104580 -7333900 - LTR7 LTR ERV1 -2 448 1 1128 166 64 96 chr17 78104819 78105133 -7333347 + AluJb SINE Alu 9 312 0 1630 191 26 7 chr17 78105136 78105440 -7333040 + AluJb SINE Alu 2 311 -1 2147 113 0 3 chr17 78105472 78105773 -7332707 - AluSg SINE Alu -8 302 3 2074 102 3 14 chr17 78106108 78106403 -7332077 - AluSx SINE Alu -18 294 3 2089 136 3 0 chr17 78106418 78106720 -7331760 - AluSx SINE Alu -9 303 1 1800 100 36 25 chr17 78107858 78108159 -7330321 + AluSx SINE Alu 1 304 0 2265 93 6 0 chr17 78108385 78108696 -7329784 - AluSp SINE Alu 0 313 1 2436 56 10 0 chr17 78108706 78109010 -7329470 - AluY SINE Alu -4 307 1 2256 91 3 0 chr17 78109639 78109936 -7328544 + AluSp SINE Alu 2 299 -14 1539 206 13 3 chr17 78111378 78111684 -7326796 + AluJb SINE Alu 1 309 -3 1046 203 58 0 chr17 78111686 78111893 -7326587 + MER20 DNA MER1_type 1 219 0 195 221 117 52 chr17 78112136 78112213 -7326267 + MIR3 SINE MIR 111 192 -16 221 301 168 7 chr17 78115344 78115487 -7322993 + MIR3 SINE MIR 31 196 -12 749 96 104 40 chr17 78120862 78120987 -7317493 - FLAM_C SINE Alu 0 133 1 2030 126 10 7 chr17 78121050 78121352 -7317128 + AluSg SINE Alu 1 303 -7 257 263 0 0 chr17 78122740 78122816 -7315664 + L1MC4a LINE L1 6868 6943 -865 2240 99 0 19 chr17 78122827 78123139 -7315341 + AluSx SINE Alu 1 306 -6 1979 96 56 26 chr17 78123151 78123287 -7315193 + AluSx SINE Alu 1 131 -181 2317 87 0 0 chr17 78123287 78123596 -7314884 + AluY SINE Alu 1 309 -2 1979 96 56 26 chr17 78123596 78123762 -7314718 + AluSx SINE Alu 131 312 0 320 78 39 0 chr17 78123765 78123816 -7314664 + GA-rich Low_complexity Low_complexity 3 55 0 225 0 0 0 chr17 78123816 78123841 -7314639 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1727 169 10 10 chr17 78125953 78126248 -7312232 + AluJb SINE Alu 1 295 -17 987 153 0 0 chr17 78126263 78126413 -7312067 - AluSg/x SINE Alu -28 282 133 624 138 106 122 chr17 78126413 78126526 -7311954 + L1MA9 LINE L1 6127 6240 -72 2271 96 0 0 chr17 78126526 78126829 -7311651 + AluY SINE Alu 1 303 -8 624 138 106 122 chr17 78126829 78126844 -7311636 + L1MA9 LINE L1 6240 6254 -58 2030 125 10 0 chr17 78126844 78127140 -7311340 + AluSx SINE Alu 1 299 -13 624 138 106 122 chr17 78127140 78127199 -7311281 + L1MA9 LINE L1 6254 6312 0 1859 158 0 10 chr17 78129244 78129541 -7308939 + AluJb SINE Alu 1 294 -18 2225 96 0 16 chr17 78129544 78129858 -7308622 + AluSq SINE Alu 1 309 -4 1209 205 63 66 chr17 78130551 78130917 -7307563 + MLT1A1 LTR MaLR 1 365 0 2211 92 17 0 chr17 78132339 78132634 -7305846 - AluSq SINE Alu -13 300 1 2134 106 0 0 chr17 78132840 78133153 -7305327 + AluY SINE Alu 1 313 0 24 32 0 0 chr17 78133395 78133426 -7305054 + AT_rich Low_complexity Low_complexity 1 31 0 2240 111 0 0 chr17 78133497 78133804 -7304676 + AluSx SINE Alu 1 307 -5 407 273 78 3 chr17 78133822 78134020 -7304460 - MER82 DNA MER2_type -5 648 376 2102 118 3 3 chr17 78134200 78134505 -7303975 - AluSx SINE Alu -7 305 1 1488 152 19 30 chr17 78134563 78134832 -7303648 + AluJb SINE Alu 29 294 -18 2544 70 0 0 chr17 78134834 78135136 -7303344 + AluY SINE Alu 1 302 -9 453 321 76 11 chr17 78135278 78135462 -7303018 - L1ME4a LINE L1 -129 5992 5797 * 961 208 10 20 chr17 78135460 78135657 -7302823 - AluJb SINE Alu -13 299 105 1712 194 7 13 chr17 78135462 78135761 -7302719 - AluJb SINE Alu -15 297 1 298 141 74 141 chr17 78135786 78135907 -7302573 - L1MB7 LINE L1 -18 6166 6054 2148 115 7 16 chr17 78135907 78136212 -7302268 - AluSq SINE Alu -11 302 1 277 198 12 70 chr17 78136213 78136299 -7302181 - L1M3 LINE L1 -618 5548 5480 197 326 104 17 chr17 78136335 78136565 -7301915 + L2 LINE L2 2996 3245 -27 1747 102 95 0 chr17 78137019 78137303 -7301177 + MER1B DNA MER1_type 29 339 0 534 222 26 0 chr17 78137434 78137551 -7300929 - MLT1J LTR MaLR -333 178 59 2149 121 0 0 chr17 78137553 78137833 -7300647 + AluSx SINE Alu 1 280 -32 996 171 49 54 chr17 78137976 78138023 -7300457 + AluJo SINE Alu 94 140 -172 2296 107 0 3 chr17 78138023 78138323 -7300157 + AluSx SINE Alu 3 301 -11 996 171 49 54 chr17 78138323 78138471 -7300009 + AluJo SINE Alu 140 290 -22 189 0 0 0 chr17 78138471 78138492 -7299988 + (GA)n Simple_repeat Simple_repeat 2 22 0 1905 138 14 3 chr17 78138818 78139098 -7299382 + AluJb SINE Alu 1 286 -26 369 43 0 0 chr17 78139098 78139145 -7299335 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1090 185 0 6 chr17 78139155 78139333 -7299147 + AluJb SINE Alu 134 310 -2 1864 104 0 50 chr17 78139450 78139729 -7298751 - AluSq SINE Alu -48 265 1 366 281 0 10 chr17 78139731 78139827 -7298653 + L2 LINE L2 3219 3313 0 1541 176 67 25 chr17 78139882 78140166 -7298314 + AluJo SINE Alu 5 300 -12 346 217 87 0 chr17 78140166 78140235 -7298245 - MER5B DNA MER1_type -54 124 50 1655 199 0 7 chr17 78140250 78140542 -7297938 + AluJo SINE Alu 1 290 -22 2273 112 3 3 chr17 78140551 78140854 -7297626 - AluSq SINE Alu -10 303 1 2439 72 0 31 chr17 78140867 78141188 -7297292 - AluY SINE Alu 0 311 1 1161 162 15 5 chr17 78141199 78141396 -7297084 - AluSg/x SINE Alu -23 289 91 261 0 0 0 chr17 78141497 78141526 -7296954 + (A)n Simple_repeat Simple_repeat 1 29 0 2564 84 3 0 chr17 78141706 78142015 -7296465 - AluSp SINE Alu -3 310 1 1641 151 79 11 chr17 78142149 78142428 -7296052 - AluJb SINE Alu -14 298 1 189 0 0 0 chr17 78142683 78142704 -7295776 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2087 113 3 3 chr17 78142707 78142989 -7295491 - AluSq SINE Alu -31 282 1 316 313 82 7 chr17 78142999 78143146 -7295334 - MIR SINE MIR -57 205 48 234 121 0 136 chr17 78143159 78143223 -7295257 + MLT1A2 LTR MaLR 17 71 -303 1126 126 135 0 chr17 78143223 78143430 -7295050 - MSTA LTR MaLR -2 426 192 2058 95 22 0 chr17 78143433 78143706 -7294774 - AluSx SINE Alu -3 309 31 1284 103 0 6 chr17 78143891 78144066 -7294414 - AluY SINE Alu -13 298 125 2179 99 20 0 chr17 78144309 78144601 -7293879 - AluSc SINE Alu -11 298 1 809 129 32 0 chr17 78145448 78145572 -7292908 - AluSg/x SINE Alu -9 303 176 2023 98 0 0 chr17 78145677 78145931 -7292549 + AluSx SINE Alu 44 297 -15 2041 155 10 3 chr17 78146672 78146982 -7291498 - AluSx SINE Alu 0 312 1 1494 159 0 4 chr17 78147270 78147503 -7290977 - AluJb SINE Alu -80 232 1 628 201 35 59 chr17 78147640 78147809 -7290671 - HAL1 LINE L1 -828 1679 1515 1403 102 15 19 chr17 78147854 78148059 -7290421 - AluSq SINE Alu -30 283 80 1169 102 43 21 chr17 78148059 78148245 -7290235 + MER1B DNA MER1_type 150 339 0 279 227 67 87 chr17 78148310 78148460 -7290020 + HAL1 LINE L1 1239 1385 -1122 230 150 75 0 chr17 78148461 78148501 -7289979 + Alu SINE Alu 1 43 -256 1545 82 0 0 chr17 78148501 78148684 -7289796 - AluSx SINE Alu -129 183 1 878 241 96 48 chr17 78148704 78148995 -7289485 + L2 LINE L2 1519 1823 -1491 1601 106 18 4 chr17 78149082 78149309 -7289171 + MER30 DNA MER1_type 1 230 0 2183 111 3 43 chr17 78149386 78149710 -7288770 - AluSx SINE Alu -1 311 1 1581 158 47 12 chr17 78149811 78150065 -7288415 + AluJb SINE Alu 1 263 -49 1930 120 0 0 chr17 78150165 78150454 -7288026 + AluSx SINE Alu 38 312 0 1119 162 0 0 chr17 78150528 78150707 -7287773 + AluYa5 SINE Alu 118 296 -15 768 261 186 52 chr17 78150709 78150754 -7287726 + L2 LINE L2 1188 1226 -2088 2514 57 3 0 chr17 78150754 78151051 -7287429 + AluY SINE Alu 1 298 -13 768 261 186 52 chr17 78151051 78151312 -7287168 + L2 LINE L2 1226 1450 -1864 2106 139 0 10 chr17 78151312 78151615 -7286865 - AluJo SINE Alu -12 300 1 768 261 186 52 chr17 78151615 78151870 -7286610 + L2 LINE L2 1450 1826 -1488 2267 111 3 0 chr17 78151872 78152169 -7286311 - AluSx SINE Alu -14 298 1 356 186 93 7 chr17 78152245 78152384 -7286096 + L1MA9 LINE L1 6044 6291 -21 1158 152 0 0 chr17 78152416 78152574 -7285906 - FAM SINE Alu -17 158 1 1671 163 32 7 chr17 78152584 78152888 -7285592 - AluJo SINE Alu 0 311 1 22 0 0 0 chr17 78152891 78152913 -7285567 + AT_rich Low_complexity Low_complexity 1 22 0 1561 227 42 8 chr17 78153113 78153496 -7284984 + L2 LINE L2 1822 2217 -1097 561 271 30 12 chr17 78153504 78153670 -7284810 + L2 LINE L2 2548 2716 -598 1337 144 84 14 chr17 78153726 78154010 -7284470 + L1MC3 LINE L1 7470 7773 -12 259 259 0 0 chr17 78154076 78154130 -7284350 - HAL1 LINE L1 -1640 867 814 2205 132 0 0 chr17 78154130 78154440 -7284040 + AluSx SINE Alu 1 310 -2 745 65 0 0 chr17 78154440 78154532 -7283948 + AluSc SINE Alu 132 223 -86 608 114 0 69 chr17 78155075 78155206 -7283274 + AluSc SINE Alu 2 123 -186 687 241 9 0 chr17 78155307 78155423 -7283057 - AluSq/x SINE Alu -196 117 1 204 314 14 0 chr17 78155433 78155503 -7282977 + L2 LINE L2 2286 2356 -958 667 160 185 25 chr17 78155513 78155713 -7282767 + LTR48 LTR ERV1 1 232 -555 596 124 41 0 chr17 78155713 78155810 -7282670 + U6 snRNA snRNA 1 101 -6 2400 97 3 0 chr17 78155834 78156143 -7282337 + AluSp SINE Alu 4 313 0 2407 164 90 24 chr17 78156143 78156679 -7281801 + LTR48 LTR ERV1 217 787 0 483 302 70 23 chr17 78156884 78157056 -7281424 + MIR SINE MIR 1 180 -82 2129 112 26 16 chr17 78157258 78157563 -7280917 + AluSq SINE Alu 1 308 -5 2583 61 3 7 chr17 78157563 78157873 -7280607 + AluSp SINE Alu 4 312 -1 253 273 162 10 chr17 78158040 78158139 -7280341 + L2 LINE L2 3191 3304 -9 422 258 13 99 chr17 78158308 78158541 -7279939 + L2 LINE L2 2824 3036 -236 2217 100 7 0 chr17 78160098 78160389 -7278091 - AluSq SINE Alu -20 293 1 2209 102 37 0 chr17 78160433 78160728 -7277752 - AluSx SINE Alu -6 306 1 246 32 0 0 chr17 78161034 78161065 -7277415 + (TA)n Simple_repeat Simple_repeat 1 31 0 2346 112 3 0 chr17 78161115 78161427 -7277053 - AluSp SINE Alu 0 313 1 185 252 72 99 chr17 78161520 78161631 -7276849 + MER5B DNA MER1_type 1 108 -70 1684 151 16 20 chr17 78161934 78162239 -7276241 + MER47A DNA MER2_type 35 338 -28 620 282 26 15 chr17 78162409 78162604 -7275876 - MIR SINE MIR -35 227 31 242 242 89 73 chr17 78162622 78162746 -7275734 - L1ME4a LINE L1 0 6121 5996 2916 10 0 0 chr17 78162747 78163057 -7275423 - AluYb8 SINE Alu -8 310 1 847 92 0 0 chr17 78163146 78163255 -7275225 + AluSg/x SINE Alu 187 295 -15 1215 153 49 129 chr17 78163414 78163740 -7274740 + AluYb8 SINE Alu 1 300 -18 1858 140 3 42 chr17 78164254 78164561 -7273919 - AluJb SINE Alu -17 295 1 435 161 11 92 chr17 78164580 78164667 -7273813 - AluJ/FLAM SINE Alu -221 91 12 434 183 43 79 chr17 78164928 78165088 -7273392 - L1ME4a LINE L1 -301 5820 5672 726 228 106 49 chr17 78166498 78166744 -7271736 + MIR SINE MIR 3 262 0 1884 164 0 3 chr17 78167189 78167501 -7270979 - AluY SINE Alu 0 311 1 2532 70 0 3 chr17 78168245 78168557 -7269923 - AluY SINE Alu 0 311 1 464 217 44 56 chr17 78169708 78169919 -7268561 + MER106B DNA MER1_type 21 1052 -7 299 114 0 0 chr17 78170268 78170312 -7268168 - AluJ/FLAM SINE Alu -210 92 49 269 327 45 27 chr17 78170872 78170982 -7267498 + MIR SINE MIR 40 151 -111 1525 159 71 25 chr17 78171064 78171347 -7267133 + AluJo SINE Alu 1 296 -16 191 191 43 64 chr17 78171380 78171427 -7267053 - MIR SINE MIR -61 147 102 800 160 0 0 chr17 78172015 78172134 -7266346 - FLAM_C SINE Alu -24 119 1 268 307 77 34 chr17 78172377 78172561 -7265919 - L2 LINE L2 -307 2965 2777 1701 172 7 4 chr17 78172595 78172899 -7265581 - AluJo SINE Alu 0 315 11 216 0 0 0 chr17 78172947 78172971 -7265509 + (T)n Simple_repeat Simple_repeat 1 24 0 1465 141 0 10 chr17 78172988 78173194 -7265286 - AluSx SINE Alu -99 213 10 255 31 0 0 chr17 78173202 78173234 -7265246 + (TA)n Simple_repeat Simple_repeat 1 32 0 1294 116 4 93 chr17 78173235 78173460 -7265020 - AluSc SINE Alu -14 295 91 420 103 17 0 chr17 78173560 78173618 -7264862 - Alu SINE Alu -250 60 2 2073 92 4 0 chr17 78173633 78173893 -7264587 - AluSg SINE Alu -47 263 3 1032 183 154 5 chr17 78173963 78174171 -7264309 - MER8 DNA MER2_type 0 239 1 2623 50 0 0 chr17 78174175 78174472 -7264008 - AluY SINE Alu -14 297 1 1549 198 10 20 chr17 78175711 78176009 -7262471 - AluJb SINE Alu -17 295 1 200 360 7 37 chr17 78176219 78176355 -7262125 + L2 LINE L2 2572 2703 -611 257 317 72 111 chr17 78176365 78176584 -7261896 + L2 LINE L2 2836 3031 -241 2507 78 0 3 chr17 78176584 78176892 -7261588 + AluY SINE Alu 1 307 -4 257 317 72 111 chr17 78176892 78177114 -7261366 + L2 LINE L2 3031 3260 -12 943 180 72 24 chr17 78177125 78177292 -7261188 - FAM SINE Alu 0 175 1 478 254 31 8 chr17 78177324 78177454 -7261026 - L1ME LINE L1 -452 5669 5537 2161 104 0 50 chr17 78177549 78177867 -7260613 + AluSx SINE Alu 1 302 -10 1877 173 3 7 chr17 78178400 78178706 -7259774 + AluJb SINE Alu 1 305 -7 196 386 34 11 chr17 78178820 78178908 -7259572 + L2 LINE L2 3168 3257 -15 1631 166 3 21 chr17 78179031 78179321 -7259159 + AluJb SINE Alu 1 285 -27 308 218 115 0 chr17 78179493 78179571 -7258909 - LTR33 LTR ERVL -4 517 431 2205 192 31 20 chr17 78179651 78180191 -7258289 - LTR27 LTR ERV1 -140 496 3 395 269 54 15 chr17 78180365 78180495 -7257985 - LTR33 LTR ERVL -306 215 81 1675 113 88 4 chr17 78180513 78180751 -7257729 + AluSx SINE Alu 1 258 -54 2106 143 0 0 chr17 78181113 78181414 -7257066 - AluSx SINE Alu -11 301 1 2096 121 3 37 chr17 78181418 78181741 -7256739 - AluSx SINE Alu 0 312 1 252 167 0 0 chr17 78181782 78181830 -7256650 + CT-rich Low_complexity Low_complexity 1 48 0 2287 106 0 0 chr17 78181830 78182132 -7256348 - AluSq SINE Alu -11 302 1 1639 199 7 3 chr17 78182134 78182425 -7256055 - AluJb SINE Alu -20 292 1 298 294 84 8 chr17 78182490 78182609 -7255871 - L2 LINE L2 -20 3252 3125 255 198 279 9 chr17 78182612 78182723 -7255757 - MLT1B LTR MaLR -5 385 245 2257 104 7 13 chr17 78182730 78183037 -7255443 - AluY SINE Alu -6 305 1 261 268 24 0 chr17 78183037 78183119 -7255361 - MLT1B LTR MaLR -211 179 96 2286 110 7 3 chr17 78183132 78183442 -7255038 - AluY SINE Alu 0 311 1 692 148 16 31 chr17 78183444 78183572 -7254908 - MLT1B LTR MaLR -264 126 1 342 347 50 41 chr17 78183640 78183859 -7254621 - L2 LINE L2 -219 3053 2833 293 313 133 8 chr17 78183991 78184119 -7254361 - L2 LINE L2 -602 2712 2569 1636 162 64 14 chr17 78184133 78184430 -7254050 + AluJb SINE Alu 1 312 0 675 151 48 6 chr17 78184458 78184624 -7253856 + GA-rich Low_complexity Low_complexity 4 176 0 2244 130 0 0 chr17 78184652 78184959 -7253521 + AluSx SINE Alu 1 307 -5 727 163 17 17 chr17 78184965 78185143 -7253337 + GA-rich Low_complexity Low_complexity 1 178 0 361 83 0 0 chr17 78185144 78185192 -7253288 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 192 77 0 0 chr17 78186218 78186244 -7252236 + (TCCA)n Simple_repeat Simple_repeat 4 29 0 189 243 0 0 chr17 78186254 78186291 -7252189 - L2 LINE L2 -43 3270 3234 1639 161 38 3 chr17 78186397 78186688 -7251792 - AluJb SINE Alu -11 301 1 1425 165 0 50 chr17 78187265 78187562 -7250918 - AluJo SINE Alu -18 294 13 810 181 43 5 chr17 78187778 78187966 -7250514 + L1M4 LINE L1 2626 2820 -3326 1674 133 3 103 chr17 78187966 78188110 -7250370 + AluSx SINE Alu 1 158 -154 2469 56 0 0 chr17 78188110 78188415 -7250065 + AluY SINE Alu 1 305 -6 1674 133 3 103 chr17 78188415 78188431 -7250049 + AluSx SINE Alu 158 174 -138 2008 116 3 10 chr17 78188431 78188734 -7249746 + AluSx SINE Alu 5 305 -7 1674 133 3 103 chr17 78188734 78188903 -7249577 + AluSx SINE Alu 174 298 -14 835 185 23 17 chr17 78188904 78189077 -7249403 + LTR44 LTR ERV1 219 392 -127 1337 197 35 25 chr17 78189079 78189203 -7249277 + AluJb SINE Alu 1 122 -190 180 0 0 0 chr17 78189203 78189223 -7249257 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 1337 197 35 25 chr17 78189223 78189382 -7249098 + AluJb SINE Alu 122 287 -25 1291 147 60 93 chr17 78189402 78189702 -7248778 + AluJo SINE Alu 2 291 -11 1603 154 91 3 chr17 78189704 78189990 -7248490 + AluJo SINE Alu 1 311 -1 1889 144 17 0 chr17 78189990 78190281 -7248199 + AluSx SINE Alu 1 296 -16 769 136 14 54 chr17 78190304 78190451 -7248029 + LTR44 LTR ERV1 379 519 0 1813 111 32 14 chr17 78190469 78190770 -7247710 + AluSx SINE Alu 1 306 0 22 35 0 0 chr17 78191719 78191748 -7246732 + AT_rich Low_complexity Low_complexity 1 29 0 1664 159 22 4 chr17 78191783 78192059 -7246421 - AluJo SINE Alu -31 281 1 366 233 50 42 chr17 78192680 78192800 -7245680 - L1ME4a LINE L1 -3 6118 5998 2143 88 30 13 chr17 78193811 78194116 -7244364 + AluSg SINE Alu 1 310 0 2026 104 0 0 chr17 78194329 78194599 -7243881 + AluSc SINE Alu 22 291 -18 233 213 0 0 chr17 78194601 78194648 -7243832 + Alu SINE Alu 255 301 -1 846 153 194 10 chr17 78194744 78194940 -7243540 - MER46A DNA MER2_type 0 236 5 2193 68 0 4 chr17 78195069 78195374 -7243106 - AluY SINE Alu 0 304 1 594 289 32 67 chr17 78195869 78195928 -7242552 - MIR SINE MIR -2 260 200 2029 105 3 32 chr17 78195928 78196243 -7242237 + AluSg SINE Alu 1 306 -4 594 289 32 67 chr17 78196243 78196436 -7242044 - MIR SINE MIR -62 200 17 1986 97 0 4 chr17 78196752 78197021 -7241459 + AluSx SINE Alu 1 268 -44 198 91 0 0 chr17 78197032 78197065 -7241415 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 811 62 62 31 chr17 78197281 78197410 -7241070 + AluJ SINE Alu 1 133 -169 192 40 0 0 chr17 78197425 78197450 -7241030 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 890 205 0 22 chr17 78197454 78197620 -7240860 + AluJ SINE Alu 131 294 -18 2045 142 0 0 chr17 78197620 78197929 -7240551 + AluSq SINE Alu 1 309 -4 890 205 0 22 chr17 78197929 78197947 -7240533 + AluJ SINE Alu 294 311 -1 323 283 139 18 chr17 78197983 78198149 -7240331 + MIR SINE MIR 77 262 0 260 224 79 40 chr17 78198311 78198387 -7240093 + HsTC2 DNA Tc2 5 83 -1815 2173 105 3 0 chr17 78198487 78198783 -7239697 - AluSx SINE Alu -15 297 1 432 254 64 0 chr17 78199140 78199250 -7239230 + MIR SINE MIR 37 153 -109 1151 125 99 39 chr17 78199259 78199491 -7238989 + AluY SINE Alu 1 246 -65 944 101 0 7 chr17 78199595 78199733 -7238747 + AluJb SINE Alu 157 293 -19 2207 81 7 3 chr17 78199767 78200062 -7238418 + AluY SINE Alu 1 296 -15 2223 99 0 3 chr17 78200070 78200374 -7238106 + AluSg SINE Alu 1 303 -7 1719 157 0 20 chr17 78200383 78200682 -7237798 + AluJo SINE Alu 1 293 -19 2072 127 0 0 chr17 78200689 78200997 -7237483 + AluSx SINE Alu 1 308 -4 1529 176 27 0 chr17 78201177 78201472 -7237008 + AluJo SINE Alu 2 304 -8 24 0 0 0 chr17 78201501 78201525 -7236955 + AT_rich Low_complexity Low_complexity 1 24 0 1767 117 64 0 chr17 78201614 78201920 -7236560 + AluSg SINE Alu 1 323 0 420 274 181 51 chr17 78201921 78202136 -7236344 - MIR SINE MIR -18 244 2 588 113 0 41 chr17 78203046 78203143 -7235337 + AluJo SINE Alu 2 94 -218 308 257 257 15 chr17 78203144 78203280 -7235200 - MIR SINE MIR -92 170 2 1249 164 0 0 chr17 78203290 78203504 -7234976 + AluJo SINE Alu 97 310 -2 335 264 17 118 chr17 78203505 78203599 -7234881 + HAL1 LINE L1 2003 2072 -435 1881 138 26 10 chr17 78203599 78203904 -7234576 + AluSx SINE Alu 1 310 -2 335 264 17 118 chr17 78203904 78203987 -7234493 + HAL1 LINE L1 2072 2162 -345 257 213 188 0 chr17 78204009 78204089 -7234391 + HAL1 LINE L1 2246 2340 -167 347 252 177 7 chr17 78204128 78204275 -7234205 + HAL1 LINE L1 2334 2505 -2 2372 82 0 0 chr17 78207907 78208210 -7230270 - AluY SINE Alu -8 303 1 2530 42 3 0 chr17 78209863 78210171 -7228309 - AluY SINE Alu -1 310 2 339 301 10 19 chr17 78210179 78210282 -7228198 - MIR3 SINE MIR -39 169 68 637 191 0 22 chr17 78210997 78211133 -7227347 + FLAM_A SINE Alu 1 133 0 361 109 0 0 chr17 78211205 78211251 -7227229 - Alu SINE Alu -254 46 1 2046 97 3 23 chr17 78211335 78211643 -7226837 + AluSx SINE Alu 1 302 -10 2088 129 0 3 chr17 78211913 78212223 -7226257 - AluSx SINE Alu -3 309 1 1524 162 66 0 chr17 78212269 78212541 -7225939 - AluSx SINE Alu -13 299 10 800 102 7 48 chr17 78212562 78212709 -7225771 - AluYa5 SINE Alu -19 292 152 2234 73 3 16 chr17 78213095 78213410 -7225070 + AluY SINE Alu 1 311 0 2086 106 3 7 chr17 78213745 78214046 -7224434 + AluSq SINE Alu 1 300 -13 1643 181 0 10 chr17 78215375 78215674 -7222806 - AluJb SINE Alu -16 296 1 716 135 0 78 chr17 78215874 78216015 -7222465 + FLAM_C SINE Alu 6 135 -8 224 232 36 0 chr17 78216811 78216867 -7221613 + CT-rich Low_complexity Low_complexity 5 62 0 2070 89 12 61 chr17 78216962 78217289 -7221191 - AluSx SINE Alu -1 311 1 2153 100 0 22 chr17 78218510 78218829 -7219651 + AluSq SINE Alu 1 312 -1 293 284 190 0 chr17 78218829 78218945 -7219535 - L1ME3A LINE L1 -35 6135 5998 2051 66 0 0 chr17 78218984 78219243 -7219237 + AluY SINE Alu 39 297 -14 1115 59 0 0 chr17 78220074 78220209 -7218271 + AluSq/x SINE Alu 1 135 -178 2285 101 8 0 chr17 78220209 78220890 -7217590 + AluY SINE Alu 1 297 -14 192 125 0 0 chr17 78221023 78221055 -7217425 + (T)n Simple_repeat Simple_repeat 1 32 0 1774 143 7 27 chr17 78221407 78221700 -7216780 + AluSx SINE Alu 7 293 -19 266 172 95 16 chr17 78222143 78222227 -7216253 + FAM SINE Alu 1 174 -1 827 166 8 2 chr17 78223336 78223583 -7214897 + AluJb SINE Alu 2 298 -14 341 81 32 16 chr17 78223583 78223645 -7214835 + Tigger7 DNA MER2_type 2244 2306 -181 738 200 0 30 chr17 78223645 78223780 -7214700 - FLAM_C SINE Alu -11 132 2 391 115 90 0 chr17 78223781 78223859 -7214621 + Tigger7 DNA MER2_type 2297 2381 -110 708 125 0 0 chr17 78223864 78223960 -7214520 + AluJ/FLAM SINE Alu 6 101 -211 2477 51 0 13 chr17 78223968 78224283 -7214197 + AluY SINE Alu 1 311 0 698 144 17 25 chr17 78224291 78224409 -7214071 + Tigger7 DNA MER2_type 2371 2487 0 200 325 115 64 chr17 78224484 78224641 -7213839 + MIR3 SINE MIR 22 186 -22 2250 91 0 0 chr17 78225063 78225360 -7213120 + AluSx SINE Alu 1 297 -15 276 193 0 91 chr17 78225980 78226068 -7212412 - MER46C DNA MER2_type 0 338 259 251 189 113 0 chr17 78226125 78226178 -7212302 + L2 LINE L2 3242 3300 -13 502 220 199 48 chr17 78226636 78226822 -7211658 - MER58C DNA MER1_type 0 215 2 246 32 0 0 chr17 78227400 78227431 -7211049 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1253 292 0 108 chr17 78227749 78228081 -7210399 - AluY SINE Alu -4 297 2 684 114 61 0 chr17 78228084 78228198 -7210282 + MER41A LTR ERV1 434 554 0 1867 122 17 0 chr17 78228215 78228502 -7209978 - AluSp SINE Alu -16 297 6 328 327 106 0 chr17 78228508 78228621 -7209859 - MIR SINE MIR -56 152 28 225 315 63 54 chr17 78228806 78228917 -7209563 - MIR SINE MIR -48 214 103 2485 54 0 13 chr17 78229102 78229417 -7209063 + AluY SINE Alu 1 311 0 2283 81 7 0 chr17 78229427 78229736 -7208744 + AluY SINE Alu 1 311 0 2093 78 0 33 chr17 78229753 78230059 -7208421 + AluSc SINE Alu 1 296 -13 2019 125 30 0 chr17 78230070 78230374 -7208106 + AluSq SINE Alu 1 313 0 26 0 0 0 chr17 78232430 78232456 -7206024 + GC_rich Low_complexity Low_complexity 1 26 0 2302 107 3 0 chr17 78234044 78234352 -7204128 - AluSp SINE Alu -4 309 1 2059 115 13 29 chr17 78234352 78234664 -7203816 - AluSc SINE Alu -2 307 1 268 31 0 0 chr17 78234670 78234702 -7203778 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1023 144 0 20 chr17 78234702 78234855 -7203625 - AluSg/x SINE Alu -1 313 133 2482 78 3 0 chr17 78234888 78235196 -7203284 + AluY SINE Alu 1 309 -2 225 198 81 70 chr17 78235207 78235293 -7203187 + L1 LINE L1 3420 3506 -2640 1128 88 0 0 chr17 78235352 78235488 -7202992 + AluSq/x SINE Alu 1 136 -176 2494 78 7 0 chr17 78235488 78235795 -7202685 + AluSq SINE Alu 1 309 -4 216 67 0 0 chr17 78236155 78236185 -7202295 + (TG)n Simple_repeat Simple_repeat 2 31 0 683 153 0 9 chr17 78236191 78236302 -7202178 - FLAM_A SINE Alu -24 118 9 2532 58 0 0 chr17 78236373 78236664 -7201816 + AluY SINE Alu 1 291 -20 1765 161 3 26 chr17 78236664 78236969 -7201511 - AluJb SINE Alu -12 300 3 1096 179 5 31 chr17 78237573 78237796 -7200684 + AluJb SINE Alu 86 302 -10 2174 127 0 26 chr17 78238015 78238323 -7200157 - AluSx SINE Alu -12 300 1 1916 165 7 3 chr17 78239587 78239890 -7198590 + AluJb SINE Alu 1 304 -8 1739 170 3 10 chr17 78239952 78240246 -7198234 - AluJb SINE Alu -20 292 1 508 81 139 0 chr17 78240280 78240366 -7198114 - HY1 scRNA scRNA -2 110 13 1293 101 0 0 chr17 78240854 78241022 -7197458 - AluSg/x SINE Alu -8 302 135 2352 153 18 122 chr17 78241121 78241510 -7196970 - MER21A LTR ERV1 0 931 624 1536 177 59 24 chr17 78241510 78241798 -7196682 - AluJo SINE Alu -12 300 3 2352 153 18 122 chr17 78241798 78242009 -7196471 - MER21A LTR ERV1 -307 624 393 551 216 17 17 chr17 78242010 78242126 -7196354 - AluJb SINE Alu -23 289 174 2134 128 0 7 chr17 78242190 78242486 -7195994 - AluSx SINE Alu -18 294 1 1982 146 4 0 chr17 78242487 78242762 -7195718 - AluSq SINE Alu -37 276 1 1525 133 111 87 chr17 78242762 78243131 -7195349 - MER21A LTR ERV1 -529 402 25 691 145 25 13 chr17 78243319 78243478 -7195002 + C-rich Low_complexity Low_complexity 1 161 0 2080 100 7 4 chr17 78243482 78243762 -7194718 - AluSq SINE Alu -32 281 1 2031 141 17 0 chr17 78243958 78244248 -7194232 - AluSx SINE Alu -17 295 1 415 145 0 26 chr17 78244249 78244325 -7194155 - AluSq/x SINE Alu -169 144 71 2361 98 16 0 chr17 78244364 78244669 -7193811 - AluSx SINE Alu -2 310 1 1509 179 38 21 chr17 78244758 78244919 -7193561 - AluJb SINE Alu -16 296 126 2142 142 0 3 chr17 78244919 78245230 -7193250 - AluSg SINE Alu 0 310 1 1509 179 38 21 chr17 78245230 78245359 -7193121 - AluJb SINE Alu -186 126 1 473 125 49 139 chr17 78245745 78245824 -7192656 - MER5C DNA MER1_type -146 178 116 2169 87 43 0 chr17 78245824 78246101 -7192379 + AluSc SINE Alu 1 289 -20 473 125 49 139 chr17 78246101 78246165 -7192315 - MER5C DNA MER1_type -208 116 48 2159 106 10 0 chr17 78246209 78246501 -7191979 - AluSx SINE Alu -17 295 1 23 0 0 0 chr17 78247200 78247223 -7191257 + AT_rich Low_complexity Low_complexity 1 23 0 281 254 0 0 chr17 78247266 78247329 -7191151 + MER5C DNA MER1_type 48 110 -214 2005 138 7 3 chr17 78247332 78247629 -7190851 + AluSx SINE Alu 1 298 -14 2095 132 0 19 chr17 78247777 78248088 -7190392 + AluSq SINE Alu 1 305 -8 1751 108 0 5 chr17 78248091 78248313 -7190167 + AluSx SINE Alu 1 221 -91 255 61 0 0 chr17 78248327 78248360 -7190120 + (A)n Simple_repeat Simple_repeat 1 33 0 1803 136 3 45 chr17 78248381 78248667 -7189813 + AluJo SINE Alu 11 284 -28 2128 105 7 0 chr17 78249250 78249526 -7188954 + AluSg SINE Alu 1 278 -32 192 40 0 0 chr17 78249528 78249553 -7188927 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 593 144 58 0 chr17 78250916 78251020 -7187460 + FLAM_A SINE Alu 18 127 -15 1227 110 115 0 chr17 78251144 78251326 -7187154 + AluJb SINE Alu 87 289 -23 805 187 28 44 chr17 78251339 78251364 -7187116 - MER21A LTR ERV1 -86 845 821 189 0 0 0 chr17 78251364 78251385 -7187095 + (CAAG)n Simple_repeat Simple_repeat 3 23 0 805 187 28 44 chr17 78251385 78251418 -7187062 - MER21A LTR ERV1 -110 821 789 2184 118 7 3 chr17 78251418 78251714 -7186766 - AluSx SINE Alu -15 297 1 805 187 28 44 chr17 78251714 78251836 -7186644 - MER21A LTR ERV1 -142 789 667 2255 109 0 3 chr17 78251894 78252188 -7186292 - AluSg SINE Alu -17 293 1 2201 76 7 35 chr17 78252229 78252537 -7185943 - AluY SINE Alu 0 300 1 1569 159 18 7 chr17 78252639 78252915 -7185565 - AluJo SINE Alu -33 279 1 2275 94 27 0 chr17 78253010 78253309 -7185171 - AluSp SINE Alu -6 307 1 2412 89 0 10 chr17 78253601 78253914 -7184566 + AluSx SINE Alu 1 310 -2 236 225 138 0 chr17 78253936 78254016 -7184464 - Charlie2 DNA MER1_type -2413 369 279 2318 110 7 0 chr17 78257663 78257971 -7180509 + AluSx SINE Alu 3 312 0 425 209 19 0 chr17 78258024 78258129 -7180351 + L1MA10 LINE L1 6224 6330 -4 1879 160 7 3 chr17 78258139 78258433 -7180047 + AluJb SINE Alu 1 295 -17 2011 87 40 7 chr17 78258434 78258709 -7179771 + AluSx SINE Alu 1 284 -28 481 239 0 54 chr17 78258815 78258945 -7179535 - FLAM_A SINE Alu -10 123 1 2421 77 7 3 chr17 78258955 78259255 -7179225 - AluSx SINE Alu -11 301 1 1184 140 6 0 chr17 78259284 78259463 -7179017 + AluSp SINE Alu 133 312 -1 2234 110 0 20 chr17 78260178 78260478 -7178002 - AluSx SINE Alu -18 294 1 203 313 50 12 chr17 78261189 78261269 -7177211 - MIR SINE MIR -89 173 91 263 238 37 154 chr17 78262029 78262112 -7176368 + L1ME4a LINE L1 5727 5818 -303 2075 96 36 7 chr17 78262112 78262393 -7176087 - AluSg SINE Alu -20 290 2 263 238 37 154 chr17 78262393 78262424 -7176056 + L1ME4a LINE L1 5818 5851 -270 1946 95 4 4 chr17 78262424 78262677 -7175803 + AluY SINE Alu 44 296 -15 2210 118 0 35 chr17 78262686 78263001 -7175479 + AluSg SINE Alu 1 304 -6 263 238 37 154 chr17 78263001 78263089 -7175391 + L1ME4a LINE L1 5859 5915 -206 448 271 214 4 chr17 78263095 78263324 -7175156 + L2 LINE L2 3019 3295 -18 2200 103 10 3 chr17 78263372 78263673 -7174807 + AluSq SINE Alu 1 303 -10 2113 101 30 14 chr17 78263685 78263982 -7174498 - AluSg1 SINE Alu -7 302 1 1819 250 166 27 chr17 78264031 78264321 -7174159 + L1ME1 LINE L1 5169 5417 -749 2109 134 0 3 chr17 78264321 78264620 -7173860 + AluSx SINE Alu 2 299 -13 1819 250 166 27 chr17 78264620 78265198 -7173282 + L1ME1 LINE L1 5417 6158 -8 2582 63 0 0 chr17 78265199 78265501 -7172979 - AluY SINE Alu -9 302 1 2273 102 10 0 chr17 78265832 78266126 -7172354 + AluSx SINE Alu 1 297 -15 2481 54 0 41 chr17 78266273 78266587 -7171893 + AluY SINE Alu 1 301 -10 588 126 0 0 chr17 78266931 78267018 -7171462 + AluJ/FLAM SINE Alu 2 88 -224 3693 154 63 32 chr17 78267676 78267891 -7170589 + LTR39 LTR ERV1 2 209 -574 2355 86 7 13 chr17 78267891 78268195 -7170285 - AluSx SINE Alu -10 302 1 3693 154 63 32 chr17 78268195 78268657 -7169823 + LTR39 LTR ERV1 209 708 -75 2381 106 0 0 chr17 78268657 78268969 -7169511 + AluSx SINE Alu 1 312 0 3693 154 63 32 chr17 78268969 78269048 -7169432 + LTR39 LTR ERV1 708 783 0 204 294 288 0 chr17 78269154 78269307 -7169173 + MIR3 SINE MIR 9 205 -3 231 296 7 70 chr17 78269353 78269396 -7169084 + MIR SINE MIR 34 78 -184 2379 79 10 0 chr17 78269396 78269688 -7168792 - AluSp SINE Alu -18 295 1 231 296 7 70 chr17 78269688 78269786 -7168694 + MIR SINE MIR 78 166 -96 242 276 92 0 chr17 78270167 78270243 -7168237 - MIR SINE MIR -71 191 109 735 172 0 22 chr17 78270324 78270458 -7168022 - FLAM_C SINE Alu -11 132 2 2228 110 20 0 chr17 78270472 78270772 -7167708 - AluSx SINE Alu -6 306 1 285 150 50 0 chr17 78271976 78272036 -7166444 + MER115 DNA AcHobo 15 77 -616 566 284 15 0 chr17 78272105 78272239 -7166241 + MER115 DNA AcHobo 207 342 -351 2650 42 0 3 chr17 78272380 78272686 -7165794 + AluY SINE Alu 2 306 -5 2246 92 7 0 chr17 78272710 78273041 -7165439 + AluSx SINE Alu 1 333 0 1672 134 0 31 chr17 78273228 78273482 -7164998 + AluJo SINE Alu 64 309 -3 531 129 43 11 chr17 78273515 78273608 -7164872 + L1MC3 LINE L1 7158 7253 -532 585 131 107 66 chr17 78273617 78273739 -7164741 - FAM SINE Alu -45 140 14 391 309 119 30 chr17 78273790 78274202 -7164278 + L2 LINE L2 2777 3311 -2 1756 146 49 28 chr17 78274298 78274585 -7163895 - AluJb SINE Alu -16 296 4 2284 74 10 24 chr17 78274596 78274893 -7163587 - AluSq SINE Alu -20 293 1 955 169 0 7 chr17 78274918 78275072 -7163408 - AluJb SINE Alu -23 289 137 2102 112 34 0 chr17 78275072 78275368 -7163112 - AluSq SINE Alu -7 306 1 1655 120 83 53 chr17 78275872 78276172 -7162308 - AluSg SINE Alu -1 309 1 2214 97 0 0 chr17 78276183 78276489 -7161991 - AluSc SINE Alu 0 306 1 507 146 0 0 chr17 78276532 78276621 -7161859 + AluY SINE Alu 215 303 -8 1263 175 5 5 chr17 78276773 78276979 -7161501 - AluJo SINE Alu -104 208 3 23 33 0 0 chr17 78277095 78277125 -7161355 + AT_rich Low_complexity Low_complexity 1 30 0 2406 70 0 0 chr17 78277616 78277934 -7160546 - AluY SINE Alu 0 318 1 2379 68 3 10 chr17 78277941 78278233 -7160247 - AluSp SINE Alu -23 290 1 2181 134 0 3 chr17 78278237 78278550 -7159930 - AluSx SINE Alu 0 312 1 2296 97 0 0 chr17 78278922 78279211 -7159269 + AluSg SINE Alu 1 289 -21 2360 55 13 42 chr17 78279212 78279522 -7158958 + AluY SINE Alu 1 301 -10 382 286 68 0 chr17 78280814 78280961 -7157519 + Charlie8 DNA MER1_type 107 263 -2154 2071 132 7 3 chr17 78281487 78281797 -7156683 - AluSx SINE Alu -1 311 1 1548 137 9 0 chr17 78281856 78282083 -7156397 + AluSg/x SINE Alu 81 309 -1 497 73 15 0 chr17 78282083 78282151 -7156329 + AluS SINE Alu 3 71 -242 431 55 192 0 chr17 78282252 78282325 -7156155 + Alu SINE Alu 221 307 -3 2103 107 13 20 chr17 78282866 78283165 -7155315 - AluSx SINE Alu -15 297 1 488 225 185 11 chr17 78283348 78283526 -7154954 - MER3 DNA MER1_type 0 209 1 881 175 0 0 chr17 78284953 78285096 -7153384 - FLAM_C SINE Alu 0 143 1 1985 112 20 24 chr17 78286256 78286551 -7151929 - AluSx SINE Alu -18 294 1 720 258 33 61 chr17 78286982 78287219 -7151261 + MIR SINE MIR 7 238 -24 1910 147 12 44 chr17 78287280 78287600 -7150880 + AluJb SINE Alu 3 312 0 1965 124 3 39 chr17 78287602 78287908 -7150572 + AluSg SINE Alu 2 296 -14 1574 137 0 0 chr17 78287909 78288128 -7150352 + AluSq SINE Alu 1 219 -94 802 146 0 0 chr17 78288128 78288251 -7150229 + AluSg/x SINE Alu 186 308 -2 254 156 0 0 chr17 78288647 78288692 -7149788 + Alu SINE Alu 1 45 -258 2442 88 0 0 chr17 78288986 78289291 -7149189 - AluY SINE Alu -6 305 1 2430 84 7 0 chr17 78289739 78290037 -7148443 - AluSp SINE Alu -13 300 1 2260 140 0 0 chr17 78290652 78290959 -7147521 + AluSx SINE Alu 1 307 -5 2347 79 17 0 chr17 78292389 78292681 -7145799 + AluSg SINE Alu 1 297 -13 24 53 0 0 chr17 78292796 78292834 -7145646 + AT_rich Low_complexity Low_complexity 1 38 0 183 281 0 18 chr17 78294218 78294275 -7144205 + MER5A DNA MER1_type 38 93 -96 1654 171 31 17 chr17 78294586 78294878 -7143602 + AluJo SINE Alu 3 298 -14 2353 110 0 0 chr17 78294880 78295188 -7143292 + AluSg SINE Alu 1 308 -2 1411 150 178 0 chr17 78295197 78295450 -7143030 + AluJb SINE Alu 1 298 -14 1085 150 23 192 chr17 78295515 78295869 -7142611 - AluJo SINE Alu -8 294 1 1066 174 13 51 chr17 78296516 78296568 -7141912 - MER82 DNA MER2_type -378 275 223 2608 50 7 0 chr17 78296568 78296867 -7141613 - AluY SINE Alu -10 301 1 1066 174 13 51 chr17 78296867 78297050 -7141430 - MER82 DNA MER2_type -430 223 49 468 42 0 0 chr17 78297054 78297125 -7141355 + AluSp/q SINE Alu 242 312 -1 973 243 224 33 chr17 78297140 78297276 -7141204 + L2 LINE L2 2214 2323 -991 1685 174 21 11 chr17 78297276 78297585 -7140895 + AluJb SINE Alu 1 312 0 973 243 224 33 chr17 78297585 78297934 -7140546 + L2 LINE L2 2323 2792 -522 496 278 89 12 chr17 78297918 78298087 -7140393 - MIR SINE MIR -7 255 74 * 553 171 0 0 chr17 78298087 78298169 -7140311 + AluJ/FLAM SINE Alu 3 84 -228 1243 129 0 0 chr17 78298182 78298353 -7140127 + AluSq SINE Alu 1 171 -142 470 148 0 0 chr17 78298353 78298434 -7140046 + AluS SINE Alu 232 312 0 2308 76 13 10 chr17 78298441 78298742 -7139738 + AluY SINE Alu 1 302 -9 1595 154 23 0 chr17 78298757 78298844 -7139636 + AluSx SINE Alu 42 126 -186 216 0 0 0 chr17 78298844 78298868 -7139612 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1595 154 23 0 chr17 78298868 78299039 -7139441 + AluSx SINE Alu 126 306 -6 754 236 38 0 chr17 78299041 78299198 -7139282 + AluJb SINE Alu 134 296 -16 2276 115 0 0 chr17 78299198 78299493 -7138987 + AluSg SINE Alu 1 295 -15 418 213 0 0 chr17 78299500 78299580 -7138900 - MIR SINE MIR -177 85 6 589 272 183 28 chr17 78299590 78300047 -7138433 + L2 LINE L2 2771 3305 -8 1771 193 10 0 chr17 78300047 78300343 -7138137 + AluJo SINE Alu 1 299 -13 195 42 0 0 chr17 78300420 78300444 -7138036 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 719 156 38 129 chr17 78300705 78300858 -7137622 + AluY SINE Alu 132 267 -44 761 120 14 78 chr17 78300858 78301000 -7137480 - AluJo/FLAM SINE Alu -169 133 1 719 156 38 129 chr17 78301000 78301032 -7137448 + AluY SINE Alu 267 300 -11 2040 113 11 7 chr17 78301812 78302116 -7136364 + AluSx SINE Alu 1 305 0 1730 135 3 118 chr17 78302119 78302261 -7136219 + AluJb SINE Alu 1 83 -219 1915 140 11 0 chr17 78302261 78302540 -7135940 + AluJo SINE Alu 1 282 -30 1730 135 3 118 chr17 78302540 78302737 -7135743 + AluJb SINE Alu 83 301 -1 2406 104 3 0 chr17 78303056 78303365 -7135115 + AluSp SINE Alu 1 310 -3 1816 171 17 10 chr17 78304111 78304409 -7134071 + AluJo SINE Alu 1 300 -12 2203 106 7 3 chr17 78304429 78304731 -7133749 - AluSq SINE Alu -10 303 1 2346 109 7 0 chr17 78304740 78305044 -7133436 - AluSx SINE Alu -6 306 1 321 261 42 8 chr17 78305076 78305195 -7133285 - MER113 DNA MER1_type? -395 126 4 2308 43 96 0 chr17 78305477 78305758 -7132722 + AluY SINE Alu 1 308 -3 888 150 0 0 chr17 78305768 78305895 -7132585 + FLAM_C SINE Alu 2 128 -5 1556 112 0 10 chr17 78306034 78306240 -7132240 + AluSx SINE Alu 7 210 -102 375 91 0 0 chr17 78306240 78306295 -7132185 + AluSx SINE Alu 245 299 -2 1060 189 35 154 chr17 78306801 78307144 -7131336 + AluSq SINE Alu 2 303 0 1196 143 0 0 chr17 78307189 78307364 -7131116 + AluSg/x SINE Alu 136 310 0 255 125 0 0 chr17 78307511 78307551 -7130929 + (CA)n Simple_repeat Simple_repeat 1 40 0 634 239 49 19 chr17 78307650 78307855 -7130625 + L1MC4a LINE L1 6778 6988 -820 1892 95 110 7 chr17 78307925 78308198 -7130282 + AluSg SINE Alu 1 301 -9 2324 110 0 0 chr17 78308319 78308618 -7129862 + AluSx SINE Alu 1 299 -13 2435 86 0 0 chr17 78308621 78308922 -7129558 + AluY SINE Alu 1 301 -10 286 260 274 20 chr17 78309073 78309219 -7129261 - MER5A DNA MER1_type 0 189 7 2289 108 10 0 chr17 78309880 78310185 -7128295 + AluSg SINE Alu 1 308 -2 1317 158 20 31 chr17 78310634 78310888 -7127592 + AluJo SINE Alu 57 307 -5 1896 154 13 29 chr17 78311156 78311468 -7127012 - AluSx SINE Alu -5 307 1 314 233 56 0 chr17 78311479 78311569 -7126911 + MER6B DNA MER2_type 47 141 -69 317 76 136 30 chr17 78311569 78311635 -7126845 + AluS SINE Alu 1 73 -229 1516 96 5 19 chr17 78311635 78311844 -7126636 - AluSq SINE Alu -35 278 73 2244 107 0 0 chr17 78311844 78312134 -7126346 + AluSg SINE Alu 1 290 -20 2262 109 0 3 chr17 78312137 78312439 -7126041 + AluSp SINE Alu 1 301 -12 783 205 108 113 chr17 78312461 78312615 -7125865 + LTR34 LTR ERV1 136 289 -410 2428 43 0 33 chr17 78312615 78312914 -7125566 + AluY SINE Alu 1 289 -22 783 205 108 113 chr17 78312914 78313247 -7125233 + LTR34 LTR ERV1 289 695 -4 2194 117 0 3 chr17 78314472 78314772 -7123708 + AluSx SINE Alu 1 299 -13 2200 105 0 0 chr17 78314774 78315069 -7123411 + AluSx SINE Alu 1 295 -17 2342 56 0 66 chr17 78315455 78315775 -7122705 + AluY SINE Alu 1 299 -12 2363 93 6 3 chr17 78316043 78316354 -7122126 - AluSx SINE Alu 0 312 1 610 167 62 176 chr17 78316450 78316508 -7121972 + AluJo SINE Alu 86 149 -163 2243 100 13 7 chr17 78316508 78316818 -7121662 + AluSx SINE Alu 1 312 0 610 167 62 176 chr17 78316818 78316986 -7121494 + AluJo SINE Alu 149 286 -26 2382 88 13 0 chr17 78316996 78317302 -7121178 + AluSg SINE Alu 1 310 0 2116 118 0 3 chr17 78317306 78317620 -7120860 + AluSp SINE Alu 1 313 0 520 211 70 0 chr17 78317649 78317763 -7120717 - MER20 DNA MER1_type -97 122 1 2309 111 0 0 chr17 78318038 78318335 -7120145 + AluSx SINE Alu 1 297 -15 2184 138 0 0 chr17 78318336 78318647 -7119833 + AluSx SINE Alu 2 312 0 690 202 0 0 chr17 78318657 78318776 -7119704 - FLAM_C SINE Alu -23 120 2 518 161 0 0 chr17 78318779 78318860 -7119620 - FRAM SINE Alu -26 150 70 2083 114 3 17 chr17 78319163 78319462 -7119018 + AluSx SINE Alu 1 295 -17 229 330 94 0 chr17 78319486 78319592 -7118888 - L2 LINE L2 -2 3270 3155 837 229 62 5 chr17 78319752 78319944 -7118536 + AluJb SINE Alu 97 299 -13 210 171 0 0 chr17 78319965 78320006 -7118474 + GA-rich Low_complexity Low_complexity 3 43 0 1691 132 6 126 chr17 78320023 78320177 -7118303 + AluJo SINE Alu 1 172 -130 2654 30 0 10 chr17 78320177 78320477 -7118003 + AluY SINE Alu 1 297 -14 2389 66 6 41 chr17 78320478 78320796 -7117684 + AluY SINE Alu 1 307 -4 1691 132 6 126 chr17 78320796 78320981 -7117499 + AluJo SINE Alu 171 301 -1 1970 121 81 0 chr17 78321001 78321274 -7117206 + AluSg SINE Alu 1 295 -15 2269 95 0 3 chr17 78321276 78321583 -7116897 + AluSq SINE Alu 1 306 0 630 171 0 0 chr17 78321591 78321696 -7116784 - Tigger4(Zombi) DNA MER2_type -2626 105 1 1966 135 24 14 chr17 78321779 78322075 -7116405 - AluSx SINE Alu 0 312 14 2061 155 0 3 chr17 78322155 78322452 -7116028 - AluSx SINE Alu -16 296 1 967 173 0 0 chr17 78322656 78322840 -7115640 - AluSg/x SINE Alu 0 316 133 2268 122 0 0 chr17 78322841 78323144 -7115336 - AluSg SINE Alu -7 303 1 1360 19 0 0 chr17 78323182 78323338 -7115142 - L1PA4 LINE L1 -3 6152 5997 369 0 0 0 chr17 78323401 78323442 -7115038 + (TG)n Simple_repeat Simple_repeat 2 42 0 414 153 0 0 chr17 78323444 78323503 -7114977 - AluS SINE Alu -32 279 221 794 167 0 23 chr17 78323507 78323639 -7114841 - FLAM_C SINE Alu 0 133 5 2203 140 0 0 chr17 78323667 78323974 -7114506 - AluSx SINE Alu -5 307 1 2460 76 3 3 chr17 78323981 78324283 -7114197 - AluSp SINE Alu -11 302 1 303 296 74 9 chr17 78324355 78324463 -7114017 - L2 LINE L2 -20 3293 3179 297 0 0 0 chr17 78324466 78324499 -7113981 + (CA)n Simple_repeat Simple_repeat 2 34 0 391 231 75 75 chr17 78324605 78324708 -7113772 + MIR SINE MIR 11 116 -146 2984 3 0 0 chr17 78324708 78325021 -7113459 - AluYb8 SINE Alu -5 313 1 391 231 75 75 chr17 78325021 78325064 -7113416 + MIR SINE MIR 115 157 -105 2057 105 20 14 chr17 78325072 78325366 -7113114 + AluSg SINE Alu 1 296 -14 2397 97 3 7 chr17 78325373 78325683 -7112797 + AluSp SINE Alu 1 309 -4 526 181 0 0 chr17 78325742 78325825 -7112655 - AluJ/FLAM SINE Alu -219 93 11 699 88 0 0 chr17 78325876 78325967 -7112513 + AluSp/q SINE Alu 210 300 -13 592 161 0 0 chr17 78326017 78326104 -7112376 - AluJ/FLAM SINE Alu -215 97 11 26 0 0 0 chr17 78326124 78326150 -7112330 + AT_rich Low_complexity Low_complexity 1 26 0 2004 136 3 17 chr17 78326150 78326285 -7112195 + AluSx SINE Alu 1 136 -166 2133 116 14 3 chr17 78326285 78326577 -7111903 + AluSq SINE Alu 1 295 -18 2470 66 0 13 chr17 78326577 78326878 -7111602 + AluY SINE Alu 1 297 -14 1818 120 57 47 chr17 78326878 78327022 -7111458 + AluSg SINE Alu 1 142 -168 2298 86 0 35 chr17 78327022 78327336 -7111144 + AluY SINE Alu 1 303 -8 1818 120 57 47 chr17 78327336 78327491 -7110989 + AluSg SINE Alu 142 303 -7 2004 136 3 17 chr17 78327491 78327648 -7110832 + AluSx SINE Alu 133 291 -11 740 152 0 23 chr17 78327661 78327793 -7110687 - FLAM_C SINE Alu 0 143 15 1475 204 29 26 chr17 78327820 78328129 -7110351 - AluJb SINE Alu 0 312 3 2420 75 3 0 chr17 78328212 78328506 -7109974 + AluSc SINE Alu 6 300 -9 2281 114 0 0 chr17 78328669 78328967 -7109513 - AluSq SINE Alu -15 298 1 2255 120 0 0 chr17 78328968 78329269 -7109211 - AluSq SINE Alu -12 301 1 2180 89 3 3 chr17 78329282 78329603 -7108877 - AluSg SINE Alu 0 321 1 2351 97 0 10 chr17 78329678 78329986 -7108494 - AluSq SINE Alu -8 305 1 242 259 191 37 chr17 78330034 78330196 -7108284 + MIR SINE MIR 70 256 -6 249 255 133 20 chr17 78330214 78330312 -7108168 + L2 LINE L2 3172 3280 -33 2153 109 3 3 chr17 78330321 78330628 -7107852 - AluSx SINE Alu 0 307 1 907 232 0 0 chr17 78330638 78330802 -7107678 - FRAM SINE Alu -2 164 1 225 0 0 0 chr17 78330813 78330838 -7107642 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1257 135 5 5 chr17 78331054 78331232 -7107248 - AluSg/x SINE Alu -1 309 129 2125 121 0 10 chr17 78331232 78331559 -7106921 - AluSx SINE Alu 0 312 1 1257 135 5 5 chr17 78331559 78331572 -7106908 - AluSg/x SINE Alu -180 130 118 2014 136 33 0 chr17 78331603 78331905 -7106575 - AluSx SINE Alu 0 312 1 1667 190 3 13 chr17 78331935 78332235 -7106245 + AluJo SINE Alu 1 297 -15 476 111 0 74 chr17 78332247 78332328 -7106152 + AluJ/FLAM SINE Alu 2 76 -236 1066 102 127 0 chr17 78332334 78332491 -7105989 - AluSq SINE Alu 0 313 137 1114 162 15 15 chr17 78332540 78332737 -7105743 + AluJo SINE Alu 104 300 -12 278 196 0 0 chr17 78332766 78332812 -7105668 + MER5A DNA MER1_type 118 163 -26 2262 84 7 7 chr17 78332846 78333131 -7105349 - AluSx SINE Alu -17 295 11 416 43 0 0 chr17 78333134 78333181 -7105299 - AluSq/x SINE Alu -202 110 64 1993 130 0 37 chr17 78533210 78533394 -6905086 - AluSx SINE Alu -1 311 143 2182 118 0 0 chr17 78533394 78533698 -6904782 - AluSg SINE Alu -1 309 6 1993 130 0 37 chr17 78533698 78533836 -6904644 - AluSx SINE Alu -169 143 1 1314 153 77 23 chr17 78533851 78534112 -6904368 - AluJo SINE Alu -16 296 22 2277 70 0 0 chr17 78534120 78534406 -6904074 - AluY SINE Alu -4 307 22 2415 64 0 0 chr17 78534414 78534712 -6903768 - AluY SINE Alu -13 298 1 425 239 122 11 chr17 78534722 78534902 -6903578 + L1MC4a LINE L1 7215 7414 -394 276 318 95 47 chr17 78534989 78535064 -6903416 + L1MC4 LINE L1 7494 7564 -478 1882 129 7 24 chr17 78535064 78535359 -6903121 + AluSx SINE Alu 1 290 -22 2321 62 0 26 chr17 78535368 78535672 -6902808 + AluY SINE Alu 1 296 -15 276 318 95 47 chr17 78535672 78535881 -6902599 + L1MC4 LINE L1 7571 7768 -274 2138 103 10 3 chr17 78535881 78536173 -6902307 + AluSq SINE Alu 1 294 -19 276 318 95 47 chr17 78536173 78536371 -6902109 + L1MC4 LINE L1 7768 8011 -31 1780 162 0 14 chr17 78536373 78536663 -6901817 + AluJb SINE Alu 5 290 -22 2331 92 3 0 chr17 78536901 78537204 -6901276 + AluSx SINE Alu 1 304 -8 195 303 242 10 chr17 78537263 78537362 -6901118 + L2 LINE L2 3151 3272 0 2067 136 3 0 chr17 78537580 78537881 -6900599 + AluSx SINE Alu 1 302 -10 183 376 59 0 chr17 78538607 78538708 -6899772 - MIR SINE MIR -78 184 78 * 427 289 132 73 chr17 78538694 78538981 -6899499 - L2 LINE L2 -3 3269 2966 2120 97 47 0 chr17 78539098 78539396 -6899084 + AluSx SINE Alu 1 312 0 369 0 0 0 chr17 78541537 78541578 -6896902 + (TG)n Simple_repeat Simple_repeat 2 42 0 286 305 126 0 chr17 78541899 78542050 -6896430 + MIR SINE MIR 10 179 -83 224 327 40 41 chr17 78543284 78543463 -6895017 + MIR SINE MIR 17 197 -60 383 227 0 0 chr17 78543990 78544065 -6894415 - MER63 DNA MER1_type -306 756 682 1567 170 22 22 chr17 78544117 78544393 -6894087 - AluJb SINE Alu -30 282 7 309 297 113 59 chr17 78544547 78544803 -6893677 - L2 LINE L2 -21 3251 2982 206 196 244 12 chr17 78544863 78544954 -6893526 + MIR SINE MIR 37 146 -83 1577 138 104 4 chr17 78544956 78545225 -6893255 + AluJo SINE Alu 1 296 -16 2214 111 3 0 chr17 78545235 78545542 -6892938 + AluSx SINE Alu 1 308 -4 2322 83 0 0 chr17 78545577 78545877 -6892603 + AluY SINE Alu 1 300 -11 2129 106 0 16 chr17 78547352 78547488 -6890992 + AluSx SINE Alu 1 138 -174 2514 65 0 0 chr17 78547488 78547794 -6890686 + AluY SINE Alu 1 306 -5 2129 106 0 16 chr17 78547794 78547960 -6890520 + AluSx SINE Alu 138 298 -14 1107 124 25 0 chr17 78548651 78548812 -6889668 + AluJo SINE Alu 6 170 -142 341 115 0 16 chr17 78549370 78549431 -6889049 + (TCCC)n Simple_repeat Simple_repeat 2 61 0 194 273 0 0 chr17 78549563 78549607 -6888873 + MIR SINE MIR 112 155 -107 221 315 194 18 chr17 78550218 78550383 -6888097 + MIR SINE MIR 4 197 -65 401 203 56 56 chr17 78551443 78551586 -6886894 + MIR3 SINE MIR 3 145 -63 2206 93 10 3 chr17 78551592 78551892 -6886588 + AluSq SINE Alu 1 302 -11 2426 61 7 0 chr17 78551894 78552190 -6886290 + AluY SINE Alu 1 298 -13 207 0 0 0 chr17 78552191 78552214 -6886266 + (TTAAA)n Simple_repeat Simple_repeat 4 26 0 248 226 113 70 chr17 78552563 78552678 -6885802 + MIR SINE MIR 20 139 -69 2221 87 3 53 chr17 78552916 78553239 -6885241 - AluSq SINE Alu -6 307 1 431 251 5 80 chr17 78553742 78553866 -6884614 - L1M4 LINE L1 -1828 4318 4186 207 0 0 0 chr17 78553866 78553889 -6884591 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 2131 104 3 0 chr17 78553889 78554173 -6884307 - AluSx SINE Alu -27 285 1 431 251 5 80 chr17 78554173 78554187 -6884293 - L1M4 LINE L1 -1959 4187 4174 2421 81 0 0 chr17 78554187 78554494 -6883986 - AluSc SINE Alu 0 309 3 431 251 5 80 chr17 78554494 78554557 -6883923 - L1M4 LINE L1 -1972 4174 4135 298 306 16 48 chr17 78554558 78554682 -6883798 - L2 LINE L2 -559 2755 2636 200 270 0 22 chr17 78556295 78556384 -6882096 + CT-rich Low_complexity Low_complexity 3 89 0 600 247 190 0 chr17 78556797 78556971 -6881509 + MIR SINE MIR 34 240 -22 181 300 57 50 chr17 78557377 78557517 -6880963 - L2 LINE L2 -26 3246 3106 1008 145 50 0 chr17 78557616 78557775 -6880705 + FRAM SINE Alu 1 166 -10 2000 139 3 0 chr17 78557808 78558109 -6880371 + AluSx SINE Alu 10 311 -1 1215 144 0 11 chr17 78558175 78558362 -6880118 - AluY SINE Alu -126 185 1 1953 143 3 0 chr17 78558458 78558752 -6879728 - AluSc SINE Alu -14 295 1 3452 108 95 80 chr17 78558800 78559683 -6878797 - pTR5 LTR ERV1 0 2438 1231 564 161 115 31 chr17 78559736 78559866 -6878614 - FLAM_A SINE Alu -1 141 1 2069 117 3 19 chr17 78559869 78560177 -6878303 - AluSx SINE Alu -9 303 1 262 263 116 0 chr17 78560274 78560369 -6878111 - MIR SINE MIR -60 202 97 833 217 0 0 chr17 78560378 78560535 -6877945 + FRAM SINE Alu 13 169 -7 2270 89 0 16 chr17 78560551 78560855 -6877625 + AluY SINE Alu 1 299 -12 2173 83 7 3 chr17 78560866 78561154 -6877326 + AluSg SINE Alu 2 290 -20 182 240 0 93 chr17 78561284 78561359 -6877121 + MIR SINE MIR 31 98 -164 617 233 81 12 chr17 78561611 78561783 -6876697 - MIR SINE MIR -18 244 61 1510 148 67 42 chr17 78561880 78562024 -6876456 + AluJo SINE Alu 1 140 -172 2132 106 7 0 chr17 78562024 78562317 -6876163 + AluSg SINE Alu 1 295 -15 1510 148 67 42 chr17 78562317 78562456 -6876024 + AluJo SINE Alu 140 291 -21 831 194 6 18 chr17 78562466 78562636 -6875844 + AluJb SINE Alu 135 302 -10 2292 81 3 0 chr17 78562828 78563123 -6875357 - AluSg SINE Alu -14 296 1 2414 66 3 0 chr17 78563218 78563523 -6874957 - AluY SINE Alu -5 306 1 369 310 83 41 chr17 78563550 78563792 -6874688 - Charlie7 DNA MER1_type -1921 691 440 2090 121 7 0 chr17 78563795 78564093 -6874387 - AluSx SINE Alu -12 300 1 930 118 7 7 chr17 78564093 78564228 -6874252 - AluSq/x SINE Alu -178 135 1 1720 99 65 48 chr17 78567667 78567823 -6870657 - AluSg SINE Alu -12 298 133 2427 53 0 7 chr17 78567823 78568123 -6870357 - AluY SINE Alu -13 298 1 1720 99 65 48 chr17 78568123 78568259 -6870221 - AluSg SINE Alu -177 133 1 391 327 39 7 chr17 78569081 78569234 -6869246 - MIR SINE MIR -78 184 27 280 349 35 0 chr17 78569789 78569875 -6868605 - MIR SINE MIR -92 170 82 2273 84 7 3 chr17 78570685 78570984 -6867496 - AluSx SINE Alu -12 300 1 211 309 0 15 chr17 78572072 78572140 -6866340 + MER5A DNA MER1_type 83 149 -40 214 325 24 12 chr17 78572447 78572530 -6865950 + L2 LINE L2 3229 3312 -1 2088 135 3 6 chr17 78572533 78572845 -6865635 - AluJb SINE Alu -1 311 1 1347 82 0 0 chr17 78572845 78573015 -6865465 - AluSg/x SINE Alu -9 303 134 2213 92 10 3 chr17 78573015 78573321 -6865159 - AluSq SINE Alu -5 308 1 328 271 99 112 chr17 78573357 78573811 -6864669 + L2 LINE L2 2036 2483 -831 467 287 49 14 chr17 78573830 78573973 -6864507 + MER58A DNA MER1_type 2 149 0 477 318 174 0 chr17 78574051 78574356 -6864124 + L2 LINE L2 2530 2887 -427 354 272 295 24 chr17 78574389 78574643 -6863837 + L2 LINE L2 2973 3295 -18 1844 163 3 3 chr17 78575625 78575925 -6862555 - AluJo SINE Alu -12 300 1 183 235 0 20 chr17 78576917 78576968 -6861512 + MIR SINE MIR 81 130 -78 2162 122 0 3 chr17 78577636 78577939 -6860541 + AluSx SINE Alu 1 302 -10 309 320 80 16 chr17 78578094 78578219 -6860261 + L1ME3 LINE L1 5999 6131 -31 2098 101 0 7 chr17 78578571 78578867 -6859613 - AluSx SINE Alu -18 294 1 1557 143 31 15 chr17 78578870 78579129 -6859351 - AluJo SINE Alu -15 297 35 232 291 13 0 chr17 78579192 78579271 -6859209 - L1ME LINE L1 -365 5756 5677 2193 87 14 0 chr17 78579374 78579660 -6858820 + AluSx SINE Alu 1 290 -22 252 0 0 0 chr17 78579675 78579703 -6858777 + (T)n Simple_repeat Simple_repeat 1 28 0 2191 98 3 0 chr17 78579720 78580007 -6858473 + AluSp SINE Alu 1 288 -25 210 37 0 0 chr17 78580010 78580037 -6858443 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 301 186 39 54 chr17 78581480 78581609 -6856871 + (GGGTG)n Simple_repeat Simple_repeat 5 131 0 830 172 0 15 chr17 78583245 78583379 -6855101 + AluJo/FLAM SINE Alu 1 132 -170 1892 112 0 12 chr17 78583380 78583639 -6854841 - AluSx SINE Alu -25 287 32 24 0 0 0 chr17 78583639 78583663 -6854817 + AT_rich Low_complexity Low_complexity 1 24 0 1447 155 0 91 chr17 78585051 78585360 -6853120 - AluJo SINE Alu -31 281 1 314 259 148 12 chr17 78585372 78585403 -6853077 + HAL1 LINE L1 52 77 -2430 2320 82 0 16 chr17 78585403 78585718 -6852762 + AluY SINE Alu 1 310 -1 314 259 148 12 chr17 78585718 78585767 -6852713 + HAL1 LINE L1 77 143 -2364 416 359 97 20 chr17 78585772 78586068 -6852412 + L1 LINE L1 4212 4478 -1668 655 197 34 7 chr17 78586068 78586215 -6852265 + AluSp SINE Alu 1 151 -162 321 241 24 0 chr17 78586319 78586402 -6852078 + MER20 DNA MER1_type 135 219 0 873 231 28 32 chr17 78586402 78586649 -6851831 + L1ME1 LINE L1 5916 6161 -5 241 254 0 0 chr17 78588139 78588202 -6850278 - AluJ/FLAM SINE Alu -239 63 1 714 230 54 0 chr17 78588213 78588361 -6850119 - FRAM SINE Alu -21 155 1 276 263 116 0 chr17 78588365 78588460 -6850020 + MIR SINE MIR 97 202 -60 1922 135 0 31 chr17 78588557 78588700 -6849780 + AluSx SINE Alu 1 147 -165 2115 128 0 0 chr17 78588700 78589004 -6849476 + AluSg SINE Alu 6 309 -1 1922 135 0 31 chr17 78589004 78589178 -6849302 + AluSx SINE Alu 147 308 -4 735 186 67 78 chr17 78589193 78589553 -6848927 - L1MB2 LINE L1 -18 6153 5798 2147 85 3 3 chr17 78590048 78590330 -6848150 + AluSp SINE Alu 15 296 -17 35 84 0 23 chr17 78590911 78591042 -6847438 + GC_rich Low_complexity Low_complexity 1 128 0 260 362 85 0 chr17 78591803 78591980 -6846500 + MIR SINE MIR 71 262 0 997 71 86 7 chr17 78592837 78592977 -6845503 - AluY SINE Alu -160 151 1 1058 59 0 0 chr17 78592979 78593115 -6845365 - AluSc SINE Alu 0 309 174 756 220 22 89 chr17 78593327 78593640 -6844840 - AluJb SINE Alu -1 311 20 218 32 32 0 chr17 78594101 78594132 -6844348 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2496 57 0 13 chr17 78594215 78594529 -6843951 - AluY SINE Alu -1 310 1 1044 184 97 52 chr17 78594629 78594778 -6843702 - AluJo SINE Alu -1 311 170 2213 110 7 7 chr17 78594778 78595088 -6843392 - AluSq SINE Alu -3 310 1 1044 184 97 52 chr17 78595088 78595100 -6843380 - AluJo SINE Alu -142 170 160 2240 98 0 3 chr17 78595100 78595405 -6843075 - AluSg SINE Alu -6 304 1 1044 184 97 52 chr17 78595405 78595509 -6842971 - AluJo SINE Alu -152 160 33 547 239 65 0 chr17 78596021 78596176 -6842304 + MIR SINE MIR 86 250 -12 266 169 15 0 chr17 78597635 78597700 -6840780 + CT-rich Low_complexity Low_complexity 2 67 0 293 92 23 69 chr17 78598676 78598763 -6839717 + (TCCC)n Simple_repeat Simple_repeat 1 83 0 289 278 41 10 chr17 78598897 78598994 -6839486 + L2 LINE L2 3158 3257 -15 2105 119 7 0 chr17 78599061 78599356 -6839124 + AluSp SINE Alu 5 301 -12 2483 47 0 0 chr17 78599356 78599653 -6838827 + AluY SINE Alu 1 297 -14 272 295 19 83 chr17 78600293 78600449 -6838031 - L3 LINE CR1 -18 1559 1414 1201 114 0 0 chr17 78600515 78600682 -6837798 - AluSq SINE Alu -13 300 134 2324 76 3 0 chr17 78600682 78600973 -6837507 - AluSp SINE Alu -21 292 1 1214 155 32 29 chr17 78601352 78601630 -6836850 - L1MB4 LINE L1 -102 6078 5800 2048 89 0 34 chr17 78601632 78601961 -6836519 - AluSx SINE Alu 0 319 1 1573 174 50 23 chr17 78601961 78602332 -6836148 - L1MB4 LINE L1 -501 5679 5305 2107 103 0 14 chr17 78602332 78602623 -6835857 - AluSx SINE Alu -25 287 1 26 0 0 0 chr17 78602633 78602659 -6835821 + AT_rich Low_complexity Low_complexity 1 26 0 268 174 0 0 chr17 78602659 78602705 -6835775 - AluSx SINE Alu -13 287 242 748 109 0 0 chr17 78602711 78602812 -6835668 + AluSg/x SINE Alu 153 253 -59 1337 159 8 50 chr17 78602812 78602924 -6835556 - AluSx SINE Alu -65 247 132 2213 117 0 0 chr17 78602924 78603231 -6835249 - AluSg SINE Alu -3 307 1 1337 159 8 50 chr17 78603231 78603376 -6835104 - AluSx SINE Alu -180 132 1 1336 183 137 11 chr17 78603407 78603669 -6834811 - AluJo SINE Alu -12 300 6 225 0 0 0 chr17 78603685 78603710 -6834770 + (T)n Simple_repeat Simple_repeat 1 25 0 557 160 9 0 chr17 78603819 78603925 -6834555 + CT-rich Low_complexity Low_complexity 4 110 0 1856 98 57 0 chr17 78603925 78604190 -6834290 - AluSx SINE Alu -32 280 1 1898 143 10 26 chr17 78605381 78605689 -6832791 + AluJo SINE Alu 1 303 -9 330 319 21 0 chr17 78606495 78606589 -6831891 + L1ME4a LINE L1 5813 5908 -213 2141 94 31 3 chr17 78606589 78606877 -6831603 + AluSx SINE Alu 1 296 -16 363 23 0 0 chr17 78610571 78610615 -6827865 + (GGA)n Simple_repeat Simple_repeat 3 46 0 2153 103 14 0 chr17 78612561 78612851 -6825629 + AluSg SINE Alu 1 294 -16 227 294 0 0 chr17 78612906 78612957 -6825523 + L2 LINE L2 3250 3300 -13 213 146 36 36 chr17 78614343 78614398 -6824082 + (CAGG)n Simple_repeat Simple_repeat 3 57 0 223 336 56 40 chr17 78614963 78615088 -6823392 + L2 LINE L2 3126 3252 -20 218 244 291 0 chr17 78616359 78616445 -6822035 - L2 LINE L2 -6 3307 3197 640 269 372 7 chr17 78616629 78617236 -6821244 - L2 LINE L2 -418 2896 2511 2011 98 34 3 chr17 78617236 78617533 -6820947 + AluSx SINE Alu 1 306 -6 1798 116 34 8 chr17 78617533 78617800 -6820680 + AluSx SINE Alu 1 274 -38 640 269 372 7 chr17 78617800 78617863 -6820617 - L2 LINE L2 -802 2512 1980 2299 48 48 0 chr17 78621924 78622213 -6816267 + AluY SINE Alu 1 303 -8 201 377 123 0 chr17 78626015 78626145 -6812335 - MIR3 SINE MIR -60 148 3 1034 198 55 110 chr17 78626332 78626660 -6811820 + MER7A DNA MER2_type 39 346 0 194 150 25 0 chr17 78628040 78628080 -6810400 + GA-rich Low_complexity Low_complexity 1 41 0 304 284 11 11 chr17 78632087 78632175 -6806305 + MIR3 SINE MIR 81 168 -40 2317 114 10 0 chr17 78632379 78632686 -6805794 + AluSq SINE Alu 1 310 -3 242 183 17 33 chr17 78634965 78635025 -6803455 + (CTG)n Simple_repeat Simple_repeat 3 61 0 340 317 121 20 chr17 78636017 78636216 -6802264 + MIR SINE MIR 44 262 0 201 139 0 0 chr17 78636794 78636837 -6801643 + (ATG)n Simple_repeat Simple_repeat 3 45 0 755 313 25 4 chr17 78636839 78637079 -6801401 - MIR SINE MIR -4 258 14 289 247 11 21 chr17 78637945 78638038 -6800442 + L2 LINE L2 2549 2640 -674 2307 106 3 7 chr17 78638201 78638504 -6799976 + AluSx SINE Alu 5 306 -6 1397 145 126 15 chr17 78638524 78638786 -6799694 + AluJb SINE Alu 18 308 -4 1263 99 6 39 chr17 78638839 78639020 -6799460 + AluSg/x SINE Alu 125 299 -13 461 259 90 21 chr17 78639498 78639687 -6798793 + MIR SINE MIR 4 205 -57 385 176 109 34 chr17 78639935 78640054 -6798426 - MER5B DNA MER1_type -10 168 41 225 292 31 10 chr17 78640088 78640184 -6798296 + L2 LINE L2 3191 3288 -25 432 305 171 58 chr17 78642298 78642540 -6795940 + L2 LINE L2 2890 3103 -169 2272 95 7 3 chr17 78642540 78642846 -6795634 - AluY SINE Alu -4 307 1 1779 156 3 65 chr17 78642846 78643167 -6795313 - AluJo SINE Alu -11 301 1 432 305 171 58 chr17 78643167 78643267 -6795213 + L2 LINE L2 3102 3272 0 242 196 217 43 chr17 78644605 78644697 -6793783 + MIR SINE MIR 32 139 -69 1885 135 87 7 chr17 78645514 78645803 -6792677 + AluSx SINE Alu 1 312 0 186 260 91 26 chr17 78645865 78645942 -6792538 - MER5B DNA MER1_type -72 106 25 2074 107 0 0 chr17 78646140 78646430 -6792050 + AluSx SINE Alu 22 311 0 2016 116 24 24 chr17 78647793 78648119 -6790361 + AluSx SINE Alu 3 312 0 1059 262 114 35 chr17 78648131 78648760 -6789720 - HAL1 LINE L1 -211 2296 1618 1054 161 0 0 chr17 78648784 78648961 -6789519 - AluJo/FRAM SINE Alu 0 310 134 1755 207 7 0 chr17 78648961 78649265 -6789215 - AluJo SINE Alu -6 306 1 1672 78 5 0 chr17 78649341 78649545 -6788935 - AluSq SINE Alu -108 205 1 2493 65 0 3 chr17 78649545 78649838 -6788642 - AluY SINE Alu -19 292 1 1843 157 3 44 chr17 78649838 78650156 -6788324 - AluSx SINE Alu -7 305 1 229 222 0 0 chr17 78650204 78650249 -6788231 + MER5B DNA MER1_type 1 45 -133 2349 89 0 10 chr17 78650249 78650552 -6787928 - AluSp SINE Alu -13 300 1 416 204 71 18 chr17 78650589 78650702 -6787778 - L1 LINE L1 -1712 4434 4316 236 253 72 24 chr17 78650853 78650909 -6787571 - HAL1 LINE L1 -2364 143 80 2589 68 0 0 chr17 78650909 78651218 -6787262 - AluY SINE Alu -2 309 1 236 253 72 24 chr17 78651218 78651244 -6787236 - HAL1 LINE L1 -2427 80 57 1535 166 0 92 chr17 78651261 78651587 -6786893 + AluJo SINE Alu 1 296 -16 1692 185 26 17 chr17 78651641 78651943 -6786537 + AluJo SINE Alu 1 305 -7 2392 97 0 3 chr17 78651946 78652245 -6786235 + AluSc SINE Alu 5 302 -7 24 0 0 0 chr17 78652257 78652281 -6786199 + AT_rich Low_complexity Low_complexity 1 24 0 237 236 0 36 chr17 78652929 78652984 -6785496 + MIR SINE MIR 63 115 -147 394 259 238 16 chr17 78652999 78653192 -6785288 - MIR SINE MIR -10 252 17 2472 94 0 0 chr17 78653225 78653534 -6784946 - AluSc SINE Alu 0 309 1 1841 181 14 0 chr17 78653534 78653827 -6784653 - AluJo SINE Alu -14 298 2 2034 152 0 10 chr17 78654234 78654544 -6783936 - AluJb SINE Alu -5 307 1 611 200 170 24 chr17 78654545 78654710 -6783770 - Tigger3(Golem) DNA MER2_type -14 3015 2827 555 180 30 0 chr17 78654711 78654811 -6783669 - Tigger3(Golem) DNA MER2_type -2925 104 2 207 327 85 58 chr17 78655288 78655511 -6782969 - MIR SINE MIR -14 248 20 2263 99 3 3 chr17 78656053 78656346 -6782134 + AluSp SINE Alu 1 293 -20 1034 137 28 38 chr17 78657309 78657521 -6780959 - MER46B DNA MER2_type -1 235 26 313 0 24 0 chr17 78657521 78657563 -6780917 + L1PA6 LINE L1 6105 6147 -7 944 136 6 30 chr17 78657583 78657752 -6780728 - MER46B DNA MER2_type -195 41 2 340 298 68 60 chr17 78657765 78657947 -6780533 + MIR SINE MIR 13 199 -63 2468 90 3 0 chr17 78657947 78658259 -6780221 + AluSp SINE Alu 1 313 0 340 298 68 60 chr17 78658259 78658324 -6780156 + MIR SINE MIR 199 262 0 2365 122 0 0 chr17 78658805 78659117 -6779363 + AluSx SINE Alu 1 312 0 252 241 51 13 chr17 78659391 78659470 -6779010 + MIR SINE MIR 164 245 -17 2472 95 0 0 chr17 78659584 78659888 -6778592 + AluSg SINE Alu 1 304 -6 856 135 0 0 chr17 78660318 78660451 -6778029 + FLAM_C SINE Alu 1 133 0 244 345 11 19 chr17 78662042 78662174 -6776306 - MER5B DNA MER1_type -18 171 29 267 225 0 56 chr17 78662275 78662346 -6776134 + MIR3 SINE MIR 94 160 -48 1798 149 0 73 chr17 78663243 78663423 -6775057 - AluJo SINE Alu -7 305 158 2105 105 14 3 chr17 78663423 78663717 -6774763 - AluSx SINE Alu -15 297 1 1798 149 0 73 chr17 78663717 78663865 -6774615 - AluJo SINE Alu -154 158 1 2417 78 0 3 chr17 78664216 78664510 -6773970 + AluSc SINE Alu 1 293 -16 2160 113 7 26 chr17 78666849 78667158 -6771322 + AluSx SINE Alu 1 303 -9 2328 112 0 3 chr17 78668457 78668770 -6769710 - AluSx SINE Alu 0 312 1 1727 178 23 7 chr17 78668872 78669175 -6769305 - AluJb SINE Alu -2 310 3 2186 92 7 0 chr17 78669311 78669623 -6768857 - AluSq SINE Alu 0 314 1 2258 186 74 34 chr17 78669658 78669809 -6768671 - Charlie1a DNA MER1_type -1306 1455 1312 1995 157 0 7 chr17 78669809 78670102 -6768378 + AluJb SINE Alu 3 293 -19 2258 186 74 34 chr17 78670102 78670837 -6767643 - Charlie1a DNA MER1_type -1449 1312 431 1382 134 134 4 chr17 78670849 78671126 -6767354 + MER44D DNA MER2_type 26 608 -1 867 212 124 110 chr17 78671130 78671281 -6767199 - Charlie1a DNA MER1_type -2334 427 280 2413 84 17 0 chr17 78671281 78671577 -6766903 - AluSg SINE Alu -9 301 1 867 212 124 110 chr17 78671577 78671607 -6766873 - Charlie1a DNA MER1_type -2481 280 252 2010 115 3 47 chr17 78671607 78671903 -6766577 - AluSx SINE Alu -12 300 18 867 212 124 110 chr17 78671903 78671930 -6766550 - Charlie1a DNA MER1_type -2509 252 227 189 0 0 0 chr17 78671930 78671951 -6766529 + (T)n Simple_repeat Simple_repeat 1 21 0 867 212 124 110 chr17 78671951 78672092 -6766388 - Charlie1a DNA MER1_type -2534 227 51 189 286 143 10 chr17 78672299 78672397 -6766083 + MIR SINE MIR 90 200 -62 1158 148 135 4 chr17 78672402 78672632 -6765848 + MER2 DNA MER2_type 1 260 -85 279 0 0 0 chr17 78672638 78672669 -6765811 + (CA)n Simple_repeat Simple_repeat 2 32 0 507 294 169 42 chr17 78672866 78673166 -6765314 + L3 LINE CR1 1116 1477 -100 2477 49 0 10 chr17 78673166 78673470 -6765010 - AluY SINE Alu -10 301 1 507 294 169 42 chr17 78673470 78673554 -6764926 + L3 LINE CR1 1477 1549 -28 191 340 10 10 chr17 78674584 78674681 -6763799 + MIR SINE MIR 30 126 -82 1788 157 3 7 chr17 78674926 78675226 -6763254 + AluJb SINE Alu 1 299 -13 307 281 99 25 chr17 78675324 78675445 -6763035 - MER119 DNA MER1_type -453 130 1 33 56 0 0 chr17 78676229 78676283 -6762197 + AT_rich Low_complexity Low_complexity 1 54 0 2175 78 3 3 chr17 78676363 78676645 -6761835 - AluSp SINE Alu -17 296 15 661 84 0 0 chr17 78676857 78676940 -6761540 + AluY SINE Alu 2 84 -227 2059 130 0 10 chr17 78677516 78677817 -6760663 - AluSx SINE Alu -12 300 3 189 0 0 0 chr17 78677822 78677843 -6760637 + (TAA)n Simple_repeat Simple_repeat 2 22 0 462 274 116 7 chr17 78678605 78678751 -6759729 + MIR SINE MIR 28 189 -73 2431 68 3 0 chr17 78680708 78681018 -6757462 + AluY SINE Alu 1 311 0 212 325 12 12 chr17 78681651 78681731 -6756749 + L2 LINE L2 3234 3313 0 2116 135 0 0 chr17 78681806 78682110 -6756370 + AluJo SINE Alu 1 304 -8 426 20 0 0 chr17 78682390 78682441 -6756039 + (TG)n Simple_repeat Simple_repeat 1 51 0 1342 123 161 0 chr17 78683621 78683857 -6754623 - AluSx SINE Alu 0 312 39 798 157 26 46 chr17 78684448 78684601 -6753879 + L1PB4 LINE L1 6004 6153 -3 24 0 0 0 chr17 78684604 78684628 -6753852 + AT_rich Low_complexity Low_complexity 1 24 0 806 132 14 8 chr17 78684889 78685096 -6753384 - AluJb SINE Alu -34 278 2 1529 225 39 27 chr17 78689377 78689624 -6748856 - L1ME1 LINE L1 -5 6161 5906 1211 182 14 5 chr17 78689624 78689838 -6748642 - MER20 DNA MER1_type 0 219 4 1529 225 39 27 chr17 78689838 78690004 -6748476 - L1ME1 LINE L1 -260 5906 5743 1928 138 0 38 chr17 78690732 78691051 -6747429 + AluSg SINE Alu 1 307 -3 2225 75 0 32 chr17 78691245 78691553 -6746927 - AluY SINE Alu -7 304 7 220 175 25 0 chr17 78692423 78692463 -6746017 + L2 LINE L2 3225 3265 -7 986 180 38 43 chr17 78693154 78693365 -6745115 - MER63A DNA MER1_type 0 210 1 1497 159 78 4 chr17 78693393 78693650 -6744830 + AluJo SINE Alu 1 276 -36 1614 156 39 26 chr17 78693667 78693975 -6744505 - AluSx SINE Alu 0 312 1 343 291 36 0 chr17 78694032 78694142 -6744338 + L2 LINE L2 2947 3060 -253 2025 114 7 10 chr17 78696507 78696806 -6741674 - AluSc SINE Alu -11 298 1 241 236 236 49 chr17 78697276 78697420 -6741060 + MIR3 SINE MIR 31 201 -7 282 352 125 18 chr17 78698411 78698738 -6739742 - L2 LINE L2 -2 3311 2950 452 302 87 48 chr17 78698808 78699060 -6739420 + Charlie8 DNA MER1_type 1 262 -2155 220 200 0 0 chr17 78700519 78700564 -6737916 + (CCA)n Simple_repeat Simple_repeat 3 47 0 239 284 175 22 chr17 78702336 78702519 -6735961 + MIR SINE MIR 2 212 -50 280 400 17 0 chr17 78702766 78702886 -6735594 + MIR SINE MIR 22 143 -119 258 229 52 31 chr17 78703541 78703637 -6734843 + L1MC5 LINE L1 7820 7917 -44 2360 70 0 7 chr17 78703660 78703959 -6734521 + AluY SINE Alu 1 297 -14 1142 88 0 0 chr17 78703959 78704107 -6734373 + AluSq SINE Alu 137 284 -29 227 269 76 41 chr17 78704121 78704156 -6734324 + L1MC4a LINE L1 5793 5825 -1983 1922 127 3 10 chr17 78704156 78704456 -6734024 + AluSq SINE Alu 1 298 -15 2059 124 0 3 chr17 78704459 78704765 -6733715 + AluSg SINE Alu 1 305 -5 227 269 76 41 chr17 78704765 78704870 -6733610 + L1MC4a LINE L1 5826 5942 -1866 1937 132 10 3 chr17 78704891 78705186 -6733294 + AluSx SINE Alu 1 297 -15 845 200 12 0 chr17 78705188 78705353 -6733127 + AluJo/FRAM SINE Alu 137 303 -9 326 302 101 58 chr17 78705353 78705492 -6732988 + L1MC4a LINE L1 6506 6650 -1158 670 226 113 76 chr17 78705532 78705805 -6732675 + L1MC4 LINE L1 6729 7017 -1025 2271 95 0 3 chr17 78705805 78706110 -6732370 - AluSx SINE Alu -8 304 1 670 226 113 76 chr17 78706110 78706164 -6732316 + L1MC4 LINE L1 7017 7068 -974 346 203 75 2 chr17 78706226 78706319 -6732161 + L1MB2 LINE L1 5499 5596 -587 952 146 43 0 chr17 78706320 78706484 -6731996 - FRAM SINE Alu -14 162 1 1921 138 10 0 chr17 78706493 78706782 -6731698 - AluSx SINE Alu -20 292 1 3102 133 43 37 chr17 78706784 78707347 -6731133 + L1MB2 LINE L1 5588 6153 -18 2135 110 0 10 chr17 78707362 78707672 -6730808 - AluY SINE Alu -4 307 1 21 0 0 0 chr17 78707676 78707697 -6730783 + AT_rich Low_complexity Low_complexity 1 21 0 1999 127 3 13 chr17 78707860 78708174 -6730306 + AluSx SINE Alu 1 311 -1 2139 98 3 14 chr17 78708193 78708517 -6729963 + AluY SINE Alu 1 311 0 456 179 36 0 chr17 78708572 78708656 -6729824 - Tigger5 DNA MER2_type 0 2323 2237 328 227 0 0 chr17 78708802 78708868 -6729612 + L1MC4 LINE L1 7192 7257 -785 2003 127 0 34 chr17 78708911 78709095 -6729385 - AluSx SINE Alu 0 312 142 2143 121 0 0 chr17 78709095 78709400 -6729080 - AluSg SINE Alu 0 310 6 2003 127 0 34 chr17 78709400 78709538 -6728942 - AluSx SINE Alu -170 142 1 1248 161 77 23 chr17 78709553 78709814 -6728666 - AluJo SINE Alu -16 296 22 2260 70 0 0 chr17 78709822 78710108 -6728372 - AluY SINE Alu -4 307 22 2406 60 0 0 chr17 78710116 78710414 -6728066 - AluY SINE Alu -13 298 1 473 261 92 110 chr17 78710424 78710766 -6727714 + L1MC4a LINE L1 7215 7562 -480 1842 129 7 24 chr17 78710766 78711061 -6727419 + AluSx SINE Alu 1 290 -22 2316 59 0 26 chr17 78711070 78711374 -6727106 + AluY SINE Alu 1 296 -15 473 261 92 110 chr17 78711374 78711583 -6726897 + L1MC4a LINE L1 7570 7781 -261 2109 103 10 3 chr17 78711583 78711875 -6726605 + AluSq SINE Alu 1 294 -19 473 261 92 110 chr17 78711875 78712073 -6726407 + L1MC4a LINE L1 7781 8011 -31 1740 162 0 14 chr17 78712075 78712365 -6726115 + AluJb SINE Alu 5 290 -22 2316 92 3 0 chr17 78712603 78712907 -6725573 + AluSx SINE Alu 1 305 -7 186 279 250 0 chr17 78712997 78713065 -6725415 + L2 LINE L2 3188 3272 0 2029 136 3 0 chr17 78713283 78713584 -6724896 + AluSx SINE Alu 1 302 -10 404 289 132 73 chr17 78714397 78714684 -6723796 - L2 LINE L2 -3 3269 2966 2095 97 47 0 chr17 78714801 78715099 -6723381 + AluSx SINE Alu 1 312 0 315 0 0 0 chr17 78717236 78717271 -6721209 + (TG)n Simple_repeat Simple_repeat 2 36 0 259 288 126 0 chr17 78717592 78717742 -6720738 + MIR SINE MIR 10 179 -83 230 319 40 41 chr17 78718976 78719155 -6719325 + MIR SINE MIR 17 197 -60 383 227 0 0 chr17 78719682 78719757 -6718723 - MER63 DNA MER1_type -306 756 682 1567 170 22 22 chr17 78719809 78720085 -6718395 - AluJb SINE Alu -30 282 7 309 297 113 59 chr17 78720239 78720495 -6717985 - L2 LINE L2 -21 3251 2982 206 196 244 12 chr17 78720555 78720646 -6717834 + MIR SINE MIR 37 146 -83 1577 138 104 4 chr17 78720648 78720917 -6717563 + AluJo SINE Alu 1 296 -16 2214 111 3 0 chr17 78720927 78721234 -6717246 + AluSx SINE Alu 1 308 -4 2322 83 0 0 chr17 78721269 78721569 -6716911 + AluY SINE Alu 1 300 -11 2137 105 0 16 chr17 78723043 78723179 -6715301 + AluSx SINE Alu 1 138 -174 2526 62 0 0 chr17 78723179 78723485 -6714995 + AluY SINE Alu 1 306 -5 2137 105 0 16 chr17 78723485 78723652 -6714828 + AluSx SINE Alu 138 299 -13 1107 124 25 0 chr17 78724343 78724504 -6713976 + AluJo SINE Alu 6 170 -142 485 103 0 13 chr17 78725050 78725128 -6713352 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 194 273 0 0 chr17 78725252 78725296 -6713184 + MIR SINE MIR 112 155 -107 221 315 194 18 chr17 78725906 78726071 -6712409 + MIR SINE MIR 4 197 -65 401 203 56 56 chr17 78727128 78727271 -6711209 + MIR3 SINE MIR 3 145 -63 2230 90 10 3 chr17 78727277 78727577 -6710903 + AluSq SINE Alu 1 302 -11 2430 58 7 0 chr17 78727579 78727874 -6710606 + AluY SINE Alu 1 297 -14 207 0 0 0 chr17 78727875 78727898 -6710582 + (TTAAA)n Simple_repeat Simple_repeat 4 26 0 248 226 113 70 chr17 78728247 78728362 -6710118 + MIR SINE MIR 20 139 -69 2236 86 3 52 chr17 78728600 78728925 -6709555 - AluSq SINE Alu -4 309 1 425 250 5 85 chr17 78729428 78729552 -6708928 - L1M4 LINE L1 -1828 4318 4186 207 0 0 0 chr17 78729552 78729575 -6708905 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 2149 100 3 0 chr17 78729575 78729859 -6708621 - AluSx SINE Alu -27 285 1 425 250 5 85 chr17 78729859 78729874 -6708606 - L1M4 LINE L1 -1959 4187 4172 2421 81 0 0 chr17 78729874 78730181 -6708299 - AluSc SINE Alu 0 309 3 425 250 5 85 chr17 78730181 78730244 -6708236 - L1M4 LINE L1 -1974 4172 4135 298 306 16 48 chr17 78730245 78730369 -6708111 - L2 LINE L2 -559 2755 2636 200 270 0 22 chr17 78731982 78732071 -6706409 + CT-rich Low_complexity Low_complexity 3 89 0 600 247 190 0 chr17 78732484 78732658 -6705822 + MIR SINE MIR 34 240 -22 1008 145 50 0 chr17 78733301 78733460 -6705020 + FRAM SINE Alu 1 166 -10 2075 128 3 0 chr17 78733493 78733791 -6704689 + AluSx SINE Alu 10 308 -4 340 225 45 36 chr17 78733791 78733902 -6704578 + MER103 DNA DNA 54 165 -1 239 306 99 18 chr17 78735629 78735740 -6702740 - L2 LINE L2 -3 3269 3150 2266 100 0 0 chr17 78735992 78736292 -6702188 + AluSx SINE Alu 1 300 -12 932 309 12 12 chr17 78736296 78736548 -6701932 - MIR SINE MIR -5 257 6 187 321 78 46 chr17 78736549 78736705 -6701775 - MIR SINE MIR -63 145 16 336 294 163 5 chr17 78737247 78737452 -6701028 + MIR SINE MIR 15 250 -12 2250 98 0 0 chr17 78737706 78738001 -6700479 - AluSx SINE Alu -17 295 1 2476 59 3 0 chr17 78738580 78738886 -6699594 - AluSp SINE Alu -6 307 1 1407 181 112 18 chr17 78739255 78739531 -6698949 - AluJb SINE Alu 0 302 1 1841 124 0 12 chr17 78740978 78741237 -6697243 + AluSx SINE Alu 32 287 -25 837 170 0 15 chr17 78741237 78741399 -6697081 - FLAM_C SINE Alu -6 420 1 334 207 41 53 chr17 78743034 78743203 -6695277 + (CACCC)n Simple_repeat Simple_repeat 5 171 0 210 37 0 0 chr17 78744647 78744674 -6693806 + (TTATA)n Simple_repeat Simple_repeat 4 30 0 2213 94 3 0 chr17 78744677 78744964 -6693516 - AluSp SINE Alu -25 288 1 216 67 0 0 chr17 78744982 78745012 -6693468 + (A)n Simple_repeat Simple_repeat 1 30 0 2179 91 14 0 chr17 78745014 78745300 -6693180 - AluSx SINE Alu -22 290 1 232 291 13 0 chr17 78745405 78745484 -6692996 + L1ME LINE L1 5677 5756 -365 1557 143 31 15 chr17 78745547 78745806 -6692674 + AluJo SINE Alu 35 297 -15 2085 105 0 7 chr17 78745809 78746105 -6692375 + AluSx SINE Alu 1 294 -18 309 320 80 16 chr17 78746458 78746583 -6691897 - L1ME3 LINE L1 -31 6131 5999 2180 119 0 3 chr17 78746738 78747041 -6691439 - AluSx SINE Alu -10 302 1 1852 163 3 3 chr17 78748752 78749053 -6689427 + AluJo SINE Alu 1 301 -11 354 272 295 24 chr17 78750035 78750289 -6688191 - L2 LINE L2 -18 3295 2973 485 318 174 0 chr17 78750322 78750627 -6687853 - L2 LINE L2 -427 2887 2530 467 287 49 14 chr17 78750705 78750848 -6687632 - MER58A DNA MER1_type 0 149 2 320 271 99 112 chr17 78750867 78751321 -6687159 - L2 LINE L2 -831 2483 2036 2227 88 10 3 chr17 78751357 78751663 -6686817 + AluSq SINE Alu 1 308 -5 1347 82 0 0 chr17 78751663 78751833 -6686647 + AluSg/x SINE Alu 134 303 -9 2092 135 3 6 chr17 78751833 78752145 -6686335 + AluJb SINE Alu 1 311 -1 214 325 24 12 chr17 78752148 78752231 -6686249 - L2 LINE L2 -1 3312 3229 211 309 0 15 chr17 78752538 78752606 -6685874 - MER5A DNA MER1_type -40 149 83 2257 84 7 3 chr17 78753694 78753991 -6684489 + AluSx SINE Alu 1 298 -14 280 349 35 0 chr17 78754801 78754887 -6683593 + MIR SINE MIR 82 170 -92 402 320 39 7 chr17 78755442 78755595 -6682885 + MIR SINE MIR 27 184 -78 1714 99 65 51 chr17 78756417 78756554 -6681926 + AluSg SINE Alu 1 135 -175 2453 53 0 7 chr17 78756554 78756857 -6681623 + AluY SINE Alu 1 301 -10 1714 99 65 51 chr17 78756857 78757013 -6681467 + AluSg SINE Alu 135 298 -12 1001 110 0 7 chr17 78760454 78760590 -6677890 + AluSq/x SINE Alu 1 135 -178 2066 125 7 0 chr17 78760590 78760887 -6677593 + AluSx SINE Alu 1 299 -13 363 303 86 43 chr17 78760889 78761123 -6677357 + Charlie7 DNA MER1_type 440 683 -1929 2286 76 10 3 chr17 78761158 78761462 -6677018 + AluY SINE Alu 1 306 -5 2292 81 3 0 chr17 78761557 78761852 -6676628 + AluSg SINE Alu 1 296 -14 831 194 6 18 chr17 78762044 78762214 -6676266 - AluJb SINE Alu -10 302 135 1510 148 67 42 chr17 78762224 78762363 -6676117 - AluJo SINE Alu -21 291 157 2146 102 7 0 chr17 78762363 78762656 -6675824 - AluSg SINE Alu -15 295 1 1510 148 67 42 chr17 78762656 78762800 -6675680 - AluJo SINE Alu -155 157 1 617 233 81 12 chr17 78762897 78763069 -6675411 + MIR SINE MIR 61 244 -18 182 240 0 93 chr17 78763321 78763396 -6675084 - MIR SINE MIR -164 98 31 2173 83 7 3 chr17 78763526 78763814 -6674666 - AluSg SINE Alu -20 290 2 2276 86 0 16 chr17 78763825 78764128 -6674352 - AluY SINE Alu -13 298 1 833 217 0 0 chr17 78764144 78764301 -6674179 - FRAM SINE Alu -7 169 13 262 263 116 0 chr17 78764310 78764405 -6674075 + MIR SINE MIR 97 202 -60 2069 117 3 19 chr17 78764502 78764810 -6673670 + AluSx SINE Alu 1 303 -9 564 161 115 31 chr17 78764813 78764943 -6673537 + FLAM_A SINE Alu 1 141 -1 3452 108 95 80 chr17 78764996 78765879 -6672601 + pTR5 LTR ERV1 1231 2438 0 859 147 28 104 chr17 78765887 78765927 -6672553 + LTR54 LTR ERV1 279 320 -190 1967 139 3 0 chr17 78765927 78766221 -6672259 + AluSc SINE Alu 1 295 -14 859 147 28 104 chr17 78766221 78766383 -6672097 + LTR54 LTR ERV1 320 461 -49 2067 115 14 0 chr17 78766383 78766679 -6671801 - AluSx SINE Alu -12 300 1 859 147 28 104 chr17 78766679 78766726 -6671754 + LTR54 LTR ERV1 461 510 0 389 274 222 0 chr17 78766752 78766905 -6671575 + MIR SINE MIR 28 214 -48 1697 75 0 0 chr17 78766905 78767117 -6671363 + AluY SINE Alu 85 296 -15 1268 118 5 11 chr17 78767213 78767399 -6671081 + AluY SINE Alu 1 185 -126 1592 157 26 46 chr17 78767477 78767645 -6670835 - AluJo SINE Alu -13 299 138 2232 95 10 0 chr17 78767645 78767940 -6670540 - AluSx SINE Alu -14 298 1 1592 157 26 46 chr17 78767940 78768076 -6670404 - AluJo SINE Alu -174 138 1 2329 99 0 0 chr17 78768100 78768403 -6670077 + AluSg SINE Alu 1 303 -7 675 263 117 4 chr17 78768454 78768701 -6669779 - L1ME3A LINE L1 -118 6052 5778 1975 112 21 0 chr17 78769313 78769599 -6668881 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr17 78769736 78769764 -6668716 + AT_rich Low_complexity Low_complexity 1 28 0 749 172 107 49 chr17 78769764 78769893 -6668587 - L1MA4 LINE L1 -7 6293 6173 2656 62 24 3 chr17 78769893 78770230 -6668250 - LTR14A LTR ERVK 0 344 1 749 172 107 49 chr17 78770230 78770344 -6668136 - L1MA4 LINE L1 -127 6173 6036 349 259 142 62 chr17 78770356 78770569 -6667911 + L1MC4a LINE L1 5506 5700 -421 2188 124 0 0 chr17 78770569 78770876 -6667604 - AluSx SINE Alu -5 307 1 349 259 142 62 chr17 78770876 78771119 -6667361 + L1MC4a LINE L1 5700 5513 -608 1935 84 6 92 chr17 78771119 78771454 -6667026 - AluY SINE Alu -5 306 1 349 259 142 62 chr17 78771454 78771605 -6666875 + L1MC4a LINE L1 5512 5649 -472 24 32 0 0 chr17 78772524 78772555 -6665925 + GC_rich Low_complexity Low_complexity 1 31 0 301 218 0 102 chr17 78773459 78773656 -6664824 + G-rich Low_complexity Low_complexity 3 179 0 211 234 245 11 chr17 78774653 78774747 -6663733 - MIR3 SINE MIR -52 156 41 204 259 130 0 chr17 78777112 78777166 -6661314 - MIR SINE MIR -91 171 111 920 118 0 15 chr17 78777240 78777375 -6661105 + FLAM_C SINE Alu 1 133 0 1997 136 0 26 chr17 78777392 78777521 -6660959 + AluJb SINE Alu 9 140 -172 1758 105 0 58 chr17 78777521 78777798 -6660682 + AluSx SINE Alu 44 304 -8 2197 119 3 0 chr17 78777800 78778103 -6660377 + AluSq SINE Alu 1 304 -9 1997 136 0 26 chr17 78778103 78778279 -6660201 + AluJb SINE Alu 141 309 -3 379 335 53 11 chr17 78778285 78778473 -6660007 - MIR SINE MIR -20 242 47 521 290 28 0 chr17 78779622 78779767 -6658713 + MIR SINE MIR 63 211 -51 330 218 92 11 chr17 78781690 78781777 -6656703 - L2 LINE L2 -38 3234 3141 1693 167 29 13 chr17 78781803 78782109 -6656371 + AluJb SINE Alu 1 311 -1 879 47 0 0 chr17 78782321 78782455 -6656025 + AluSc SINE Alu 174 307 0 1801 65 192 0 chr17 78782457 78782717 -6655763 + AluY SINE Alu 1 310 -1 835 146 0 22 chr17 78783221 78783358 -6655122 - AluJo SINE Alu -178 134 1 2081 92 13 43 chr17 78783440 78783745 -6654735 - AluY SINE Alu -15 296 1 1071 79 79 7 chr17 78783785 78783937 -6654543 + AluY SINE Alu 1 163 -148 1815 182 0 0 chr17 78784070 78784367 -6654113 + AluJb SINE Alu 1 297 -15 741 185 0 30 chr17 78784411 78784546 -6653934 + FLAM_C SINE Alu 1 131 -2 2139 123 0 0 chr17 78784556 78784856 -6653624 + AluSx SINE Alu 1 300 -12 1106 186 19 9 chr17 78785041 78785200 -6653280 - AluJo SINE Alu -16 296 133 2043 89 38 7 chr17 78785200 78785491 -6652989 - AluSg SINE Alu -10 300 1 1106 186 19 9 chr17 78785491 78785541 -6652939 - AluJo SINE Alu -179 133 85 1927 126 41 7 chr17 78785745 78786038 -6652442 + AluSx SINE Alu 1 303 -9 275 242 113 0 chr17 78786078 78786202 -6652278 - L1MC4 LINE L1 0 8042 7905 2174 117 3 0 chr17 78786284 78786591 -6651889 + AluSp SINE Alu 1 308 -5 383 169 140 59 chr17 78786623 78786759 -6651721 - L1MC4 LINE L1 -330 7712 7566 983 110 75 0 chr17 78786759 78786905 -6651575 - AluSg/x SINE Alu -23 289 133 1784 135 14 17 chr17 78787176 78787472 -6651008 + AluJo SINE Alu 11 305 -7 2194 131 0 0 chr17 78787475 78787787 -6650693 + AluSx SINE Alu 1 312 0 967 140 21 62 chr17 78788200 78788332 -6650148 + MER53 DNA DNA 5 128 -61 1799 176 3 0 chr17 78788332 78788627 -6649853 + AluJb SINE Alu 1 296 -16 967 140 21 62 chr17 78788627 78788687 -6649793 + MER53 DNA DNA 128 189 0 227 143 184 0 chr17 78790519 78790568 -6647912 + MER53 DNA DNA 3 60 -129 1572 148 39 0 chr17 78790588 78790845 -6647635 + AluSx SINE Alu 34 300 -12 281 339 42 8 chr17 78792109 78792227 -6646253 + MIR SINE MIR 37 158 -104 328 257 100 10 chr17 78792482 78792617 -6645863 - MIR SINE MIR -60 148 12 21 0 0 0 chr17 78792799 78792820 -6645660 + GC_rich Low_complexity Low_complexity 1 21 0 300 280 0 0 chr17 78793997 78794097 -6644383 + (CA)n Simple_repeat Simple_repeat 2 101 0 297 276 186 45 chr17 78795198 78795354 -6643126 - MER91A DNA MER1_type -1 195 18 2142 96 0 0 chr17 78798228 78798535 -6639945 + AluSx SINE Alu 5 311 0 275 302 233 47 chr17 78798951 78799123 -6639357 + MIR SINE MIR 17 220 -42 1897 149 3 20 chr17 78799176 78799477 -6639003 - AluJb SINE Alu -16 296 1 1944 121 0 51 chr17 78799556 78799871 -6638609 + AluSx SINE Alu 1 299 -13 592 214 17 0 chr17 78799882 78799999 -6638481 + FLAM_A SINE Alu 15 133 -9 2074 121 0 0 chr17 78800000 78800323 -6638157 + AluSg SINE Alu 1 323 0 2160 114 10 0 chr17 78800418 78800724 -6637756 + AluSg SINE Alu 1 309 -1 2091 100 0 7 chr17 78800819 78801110 -6637370 + AluSq SINE Alu 6 294 -19 1733 162 28 0 chr17 78801121 78801405 -6637075 + AluJo SINE Alu 1 292 -20 392 191 154 15 chr17 78801463 78801599 -6636881 + L1ME4a LINE L1 5965 6119 -2 364 269 17 34 chr17 78802740 78802859 -6635621 + MIR SINE MIR 28 144 -118 521 267 33 7 chr17 78803541 78803691 -6634789 + MIR3 SINE MIR 33 186 -22 22 0 0 0 chr17 78804273 78804295 -6634185 + GC_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 78804312 78804343 -6634137 + GC_rich Low_complexity Low_complexity 1 31 0 2353 70 3 3 chr17 78804766 78805066 -6633414 + AluSp SINE Alu 1 300 -13 729 175 27 76 chr17 78805531 78805586 -6632894 + L1M4 LINE L1 5031 5087 -1059 2216 102 0 7 chr17 78805586 78805891 -6632589 - AluSq SINE Alu -10 303 1 1863 111 39 0 chr17 78805894 78806200 -6632280 - AluSx SINE Alu 0 312 3 729 175 27 76 chr17 78806200 78806296 -6632184 + L1M4 LINE L1 5089 5174 -972 1529 163 116 70 chr17 78806296 78806726 -6631754 - LTR7 LTR ERV1 0 450 1 729 175 27 76 chr17 78806726 78806792 -6631688 + L1M4 LINE L1 5174 5242 -904 569 209 9 26 chr17 78806805 78806920 -6631560 + AluJb SINE Alu 74 186 -126 403 150 22 20 chr17 78806941 78807027 -6631453 + L1MB8 LINE L1 5317 5401 -783 1854 149 3 20 chr17 78807027 78807328 -6631152 + AluSx SINE Alu 2 297 -15 403 150 22 20 chr17 78807328 78807404 -6631076 + L1MB8 LINE L1 5401 5855 -329 1387 69 0 0 chr17 78807414 78807588 -6630892 + AluY SINE Alu 127 300 -11 1178 182 112 7 chr17 78807588 78807884 -6630596 + L1MB8 LINE L1 5852 6178 0 1533 161 11 11 chr17 78807894 78808025 -6630455 + AluJo SINE Alu 3 133 -179 2249 101 0 3 chr17 78808025 78808331 -6630149 + AluSx SINE Alu 1 305 -7 1533 161 11 11 chr17 78808331 78808460 -6630020 + AluJo SINE Alu 132 263 -49 570 313 54 18 chr17 78808675 78808899 -6629581 + MIR SINE MIR 31 262 0 2188 104 3 3 chr17 78809146 78809444 -6629036 - AluSx SINE Alu -14 298 1 2080 131 3 10 chr17 78809493 78809806 -6628674 - AluSx SINE Alu -1 311 1 914 205 0 0 chr17 79010277 79010443 -6428037 + AluJo/FRAM SINE Alu 137 302 0 2120 118 0 3 chr17 79010847 79011143 -6427337 - AluSx SINE Alu -15 297 3 1957 56 4 22 chr17 79011260 79011530 -6426950 - AluY SINE Alu -46 265 1 290 234 16 0 chr17 79011531 79011595 -6426885 + MLT1C LTR MaLR 403 467 0 2079 123 10 3 chr17 79011690 79012000 -6426480 + AluSp SINE Alu 1 312 -1 1979 102 4 0 chr17 79012079 79012344 -6426136 + AluSx SINE Alu 3 268 -44 1894 106 62 4 chr17 79012401 79012675 -6425805 + AluSq SINE Alu 2 291 -22 1014 129 6 6 chr17 79012998 79013161 -6425319 + AluY SINE Alu 134 296 -15 291 175 4 0 chr17 79013719 79013781 -6424699 + Alu SINE Alu 237 282 -20 228 100 0 0 chr17 79013806 79013846 -6424634 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 1102 47 0 0 chr17 79013848 79013976 -6424504 + AluSg SINE Alu 1 128 -182 2199 120 0 0 chr17 79014025 79014324 -6424156 + AluSg SINE Alu 4 302 -8 307 85 0 0 chr17 79014405 79014452 -6424028 - L1PB4 LINE L1 -182 5974 5928 342 216 40 0 chr17 79014550 79014624 -6423856 + FRAM/FAM SINE Alu 3 79 -87 308 322 130 54 chr17 79014722 79014961 -6423519 + L1M4 LINE L1 3025 3281 -2865 405 293 218 7 chr17 79015999 79016146 -6422334 - MER91A DNA MER1_type -1 195 18 319 281 74 41 chr17 79016179 79016300 -6422180 - L2 LINE L2 -1 3271 3147 2231 80 3 3 chr17 79017101 79017390 -6421090 - AluSc SINE Alu -20 289 1 1943 99 74 0 chr17 79017391 79017675 -6420805 - AluSx SINE Alu -7 305 1 921 174 11 74 chr17 79018635 79018825 -6419655 + MER45A DNA AcHobo 1 178 0 2353 70 3 3 chr17 79019682 79019982 -6418498 + AluSp SINE Alu 1 300 -13 681 169 26 108 chr17 79020446 79020501 -6417979 + L1M4 LINE L1 5031 5089 -1057 2211 85 0 7 chr17 79020501 79020795 -6417685 - AluSq SINE Alu -10 303 12 681 169 26 108 chr17 79020795 79020806 -6417674 + L1M4 LINE L1 5089 5099 -1047 1863 111 39 0 chr17 79020806 79021112 -6417368 - AluSx SINE Alu 0 312 3 681 169 26 108 chr17 79021112 79021208 -6417272 + L1M4 LINE L1 5099 5172 -974 1529 163 116 70 chr17 79021208 79021638 -6416842 - LTR7 LTR ERV1 0 450 1 681 169 26 108 chr17 79021638 79021704 -6416776 + L1M4 LINE L1 5172 5242 -904 569 209 9 26 chr17 79021717 79021832 -6416648 + AluJb SINE Alu 74 186 -126 335 105 0 26 chr17 79021853 79021929 -6416551 + L1M LINE L1 5317 5390 -794 544 290 35 0 chr17 79025755 79025900 -6412580 + MIR SINE MIR 74 223 -39 1001 140 6 30 chr17 79026559 79026723 -6411757 - FRAM SINE Alu -17 159 1 297 276 186 45 chr17 79028954 79029110 -6409370 + MER91A DNA MER1_type 18 195 -1 2182 81 13 13 chr17 79031426 79031736 -6406744 + AluSq SINE Alu 2 311 -2 1218 138 62 69 chr17 79032064 79032340 -6406140 - AluJb SINE Alu -10 302 29 1072 88 14 7 chr17 79032393 79032541 -6405939 + AluSq/x SINE Alu 1 149 -163 2491 50 0 0 chr17 79032653 79032954 -6405526 + AluY SINE Alu 2 302 -9 238 324 166 31 chr17 79033181 79033440 -6405040 - L2 LINE L2 -75 3238 2945 1744 75 0 0 chr17 79034176 79034403 -6404077 + AluY SINE Alu 3 229 -82 339 239 54 0 chr17 79035327 79035419 -6403061 + MIR SINE MIR 87 183 -79 292 328 58 26 chr17 79035761 79035941 -6402539 - MIR3 SINE MIR -68 140 4 690 82 20 0 chr17 79037058 79037156 -6401324 - AluY SINE Alu -211 100 1 22 0 0 0 chr17 79037463 79037485 -6400995 + GC_rich Low_complexity Low_complexity 1 22 0 299 321 84 0 chr17 79038248 79038379 -6400101 + L2 LINE L2 3167 3308 -5 2474 42 3 10 chr17 79038421 79038727 -6399753 + AluSp SINE Alu 1 304 -9 216 0 0 0 chr17 79038766 79038790 -6399690 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 262 325 234 0 chr17 79038812 79038966 -6399514 + MIR SINE MIR 12 201 -61 2070 142 0 0 chr17 79039015 79039325 -6399155 - AluSx SINE Alu -2 310 1 2101 79 4 0 chr17 79041498 79041763 -6396717 + AluSc SINE Alu 24 289 -20 1168 94 19 0 chr17 79041763 79041923 -6396557 + AluSg/x SINE Alu 134 296 -16 267 296 330 0 chr17 79042078 79042257 -6396223 - MIR SINE MIR -8 254 17 405 310 70 11 chr17 79042380 79042567 -6395913 + L3 LINE CR1 1308 1505 -72 1164 228 65 130 chr17 79042980 79043502 -6394978 + L2 LINE L2 2826 3313 0 257 287 59 40 chr17 79043664 79043765 -6394715 - MIR3 SINE MIR -11 197 95 2165 114 3 0 chr17 79046834 79047142 -6391338 - AluSx SINE Alu -3 309 1 2124 117 3 0 chr17 79047292 79047592 -6390888 - AluSx SINE Alu -11 301 1 2209 87 7 0 chr17 79047892 79048191 -6390289 + AluY SINE Alu 1 301 -10 2220 109 3 13 chr17 79048192 79048504 -6389976 + AluSp SINE Alu 1 309 -4 840 229 11 0 chr17 79048581 79048760 -6389720 - AluJo SINE Alu -12 300 120 2253 91 3 10 chr17 79050202 79050509 -6387971 - AluSg SINE Alu -5 305 1 2261 97 0 3 chr17 79050509 79050809 -6387671 - AluSx SINE Alu -13 299 1 1007 63 0 0 chr17 79050817 79050943 -6387537 - AluSc SINE Alu -13 296 171 257 282 0 10 chr17 79051156 79051259 -6387221 + (TG)n Simple_repeat Simple_repeat 2 103 0 21 0 0 0 chr17 79052434 79052455 -6386025 + GC_rich Low_complexity Low_complexity 1 21 0 328 256 100 10 chr17 79052636 79052771 -6385709 + MIR SINE MIR 12 153 -60 281 339 42 8 chr17 79053025 79053143 -6385337 - MIR SINE MIR -104 158 37 1603 144 39 0 chr17 79054406 79054663 -6383817 - AluSx SINE Alu -12 300 34 227 143 184 0 chr17 79054683 79054732 -6383748 - MER53 DNA DNA -129 60 3 1778 161 3 13 chr17 79056708 79057006 -6381474 - AluJo SINE Alu -17 295 1 549 110 0 11 chr17 79057006 79057097 -6381383 - Cheshire DNA MER1_type -314 2106 2017 1415 109 57 0 chr17 79057100 79057310 -6381170 - AluJb SINE Alu -4 308 87 2272 53 46 0 chr17 79057323 79057607 -6380873 - AluY SINE Alu -14 297 1 3563 184 90 21 chr17 79057608 79057668 -6380812 - Cheshire DNA MER1_type -396 2024 1970 2172 88 0 10 chr17 79057668 79057963 -6380517 - AluSx SINE Alu -20 292 1 3563 184 90 21 chr17 79057963 79058046 -6380434 - Cheshire DNA MER1_type -450 1970 1894 2066 128 0 3 chr17 79058046 79058343 -6380137 - AluSx SINE Alu -12 300 5 3563 184 90 21 chr17 79058343 79059069 -6379411 - Cheshire DNA MER1_type -526 1894 1094 1903 103 10 24 chr17 79059111 79059402 -6379078 - AluSc SINE Alu -22 287 1 1342 129 0 15 chr17 79059402 79059674 -6378806 - AluSc SINE Alu -176 133 1 1153 201 0 59 chr17 79059674 79059962 -6378518 - Cheshire DNA MER1_type -1495 925 655 1491 146 60 50 chr17 79059971 79060272 -6378208 + AluJo SINE Alu 9 312 0 313 183 122 0 chr17 79060281 79060363 -6378117 + Cheshire DNA MER1_type 547 638 -1782 1881 142 10 3 chr17 79060371 79060666 -6377814 + AluSx SINE Alu 1 297 -15 2071 106 31 0 chr17 79060676 79060968 -6377512 + AluSg SINE Alu 1 301 -9 819 206 12 42 chr17 79060981 79061146 -6377334 - FRAM SINE Alu -15 161 2 544 236 8 0 chr17 79061169 79061296 -6377184 - Cheshire DNA MER1_type -1902 518 391 2360 65 7 0 chr17 79061316 79061610 -6376870 + AluY SINE Alu 1 296 -15 390 227 8 62 chr17 79061610 79061738 -6376742 - Cheshire DNA MER1_type -2099 321 201 1614 76 0 14 chr17 79062012 79062222 -6376258 + AluSg/x SINE Alu 83 289 -21 782 167 0 8 chr17 79062408 79062528 -6375952 + FLAM_A SINE Alu 2 120 -13 1264 154 86 9 chr17 79062548 79062768 -6375712 + AluJb SINE Alu 1 237 -75 1999 141 20 3 chr17 79064203 79064508 -6373972 - AluJo SINE Alu 0 312 3 182 273 36 0 chr17 79064516 79064571 -6373909 + MIR SINE MIR 110 166 -96 719 135 32 48 chr17 79066300 79066426 -6372054 + FLAM_C SINE Alu 2 125 -8 2056 124 3 7 chr17 79068100 79068399 -6370081 - AluSx SINE Alu -14 298 1 1725 157 17 10 chr17 79073121 79073420 -6365060 + AluJo SINE Alu 1 301 -11 739 123 9 9 chr17 79073420 79073528 -6364952 + FLAM_C SINE Alu 36 143 0 1835 97 30 8 chr17 79073536 79073803 -6364677 + AluSx SINE Alu 1 273 -39 523 202 91 0 chr17 79075064 79075163 -6363317 + FLAM_A SINE Alu 1 108 -34 1616 155 40 24 chr17 79075181 79075477 -6363003 + AluSx SINE Alu 2 302 -10 438 266 66 74 chr17 79076218 79076462 -6362018 - MER112 DNA MER1_type 0 260 19 2105 106 10 3 chr17 79079018 79079310 -6359170 + AluSc SINE Alu 1 294 -15 355 135 39 14 chr17 79079310 79079396 -6359084 + L1MB8 LINE L1 5778 5864 -314 1387 69 0 0 chr17 79079396 79079570 -6358910 + AluY SINE Alu 127 300 -11 1178 182 112 7 chr17 79079570 79079866 -6358614 + L1MB8 LINE L1 5852 6178 0 1193 189 11 62 chr17 79079876 79080007 -6358473 + AluJo SINE Alu 3 114 -198 2183 102 0 3 chr17 79080007 79080302 -6358178 + AluSx SINE Alu 1 294 -18 1193 189 11 62 chr17 79080302 79080445 -6358035 + AluJo SINE Alu 114 263 -49 570 313 54 18 chr17 79080660 79080884 -6357596 + MIR SINE MIR 31 262 0 2203 101 3 3 chr17 79081131 79081429 -6357051 - AluSx SINE Alu -14 298 1 2025 127 3 19 chr17 79081478 79081794 -6356686 - AluSx SINE Alu -1 311 1 503 146 24 0 chr17 79081826 79081908 -6356572 + AluS SINE Alu 1 84 -228 426 141 0 0 chr17 79082008 79082072 -6356408 - AluJ/FLAM SINE Alu -243 69 6 908 142 0 20 chr17 79082076 79082224 -6356256 - FRAM SINE Alu -14 162 18 811 236 30 0 chr17 79082277 79082442 -6356038 + FRAM SINE Alu 2 171 -5 1977 94 0 100 chr17 79083572 79083728 -6354752 + AluSx SINE Alu 10 117 -195 2097 116 7 0 chr17 79083728 79084031 -6354449 + AluSg SINE Alu 1 305 -5 1977 94 0 100 chr17 79084031 79084203 -6354277 + AluSx SINE Alu 117 305 -7 2321 86 3 13 chr17 79084587 79084902 -6353578 + AluSx SINE Alu 1 312 0 367 326 52 0 chr17 79085014 79085149 -6353331 - MIR3 SINE MIR -48 160 19 1928 129 24 0 chr17 79085184 79085501 -6352979 + AluSx SINE Alu 1 324 0 816 145 51 7 chr17 79085553 79085691 -6352789 + AluJb SINE Alu 1 144 -168 2130 89 34 0 chr17 79085691 79085983 -6352497 + AluSq SINE Alu 1 302 -11 207 114 0 0 chr17 79086397 79086432 -6352048 + (CAACC)n Simple_repeat Simple_repeat 4 38 0 971 92 7 28 chr17 79086502 79086643 -6351837 + AluSq SINE Alu 133 270 -43 3052 266 86 7 chr17 79086763 79087369 -6351111 + L1MB7 LINE L1 5257 5814 -370 1916 132 35 0 chr17 79087369 79087657 -6350823 + AluSx SINE Alu 2 299 -13 3052 266 86 7 chr17 79087657 79087680 -6350800 + L1MB7 LINE L1 5814 5834 -350 2072 66 7 7 chr17 79087680 79087951 -6350529 + AluSp SINE Alu 1 271 -42 3052 266 86 7 chr17 79087951 79088157 -6350323 + L1MB7 LINE L1 5834 6165 -19 1990 100 0 14 chr17 79088157 79088438 -6350042 - AluSg SINE Alu -14 296 20 3052 266 86 7 chr17 79088438 79088460 -6350020 + L1MB7 LINE L1 6165 6184 0 639 151 28 19 chr17 79088461 79088567 -6349913 + FLAM_C SINE Alu 1 107 -36 2173 94 0 57 chr17 79088883 79089020 -6349460 + AluSx SINE Alu 1 144 -168 2241 97 0 3 chr17 79089020 79089320 -6349160 + AluSx SINE Alu 1 299 -13 2173 94 0 57 chr17 79089320 79089513 -6348967 + AluSx SINE Alu 144 312 0 1159 141 0 0 chr17 79089513 79089683 -6348797 + AluSg/x SINE Alu 130 299 -11 2472 54 0 0 chr17 79090164 79090459 -6348021 - AluY SINE Alu -16 295 1 2048 112 23 10 chr17 79091267 79091571 -6346909 + AluSx SINE Alu 1 308 -4 2029 117 3 13 chr17 79091571 79091869 -6346611 + AluSx SINE Alu 1 297 -15 441 103 29 0 chr17 79092003 79092071 -6346409 + AluS SINE Alu 1 70 -243 497 277 31 7 chr17 79092417 79092578 -6345902 - MIR3 SINE MIR -22 186 21 364 269 17 34 chr17 79093246 79093365 -6345115 - MIR SINE MIR -118 144 28 392 191 154 15 chr17 79094504 79094640 -6343840 - L1ME4a LINE L1 -2 6119 5965 1733 162 28 0 chr17 79094698 79094982 -6343498 - AluJo SINE Alu -20 292 1 2100 99 0 7 chr17 79094993 79095285 -6343195 - AluSq SINE Alu -18 295 6 2160 114 10 0 chr17 79095380 79095686 -6342794 - AluSg SINE Alu -1 309 1 2073 121 0 0 chr17 79095781 79096104 -6342376 - AluSg SINE Alu 0 323 1 592 214 17 0 chr17 79096105 79096222 -6342258 - FLAM_A SINE Alu -9 133 15 1900 121 3 51 chr17 79096233 79096547 -6341933 - AluSx SINE Alu -13 299 1 1897 149 3 20 chr17 79096626 79096927 -6341553 + AluJb SINE Alu 1 296 -16 275 302 233 47 chr17 79096980 79097152 -6341328 - MIR SINE MIR -42 220 17 2330 101 0 0 chr17 79097569 79097877 -6340603 - AluSx SINE Alu 0 312 5 363 212 0 0 chr17 79100367 79100433 -6338047 + L2 LINE L2 3246 3311 -2 2185 87 0 17 chr17 79100942 79101240 -6337240 + AluSx SINE Alu 1 293 -19 1804 154 3 44 chr17 79102128 79102274 -6336206 + AluJb SINE Alu 1 151 -161 2383 55 7 0 chr17 79102274 79102567 -6335913 + AluY SINE Alu 1 295 -16 2185 99 3 10 chr17 79102569 79102873 -6335607 + AluSg SINE Alu 1 302 -8 1804 154 3 44 chr17 79102873 79103041 -6335439 + AluJb SINE Alu 152 305 -7 2289 63 0 0 chr17 79103047 79103375 -6335105 + AluY SINE Alu 1 328 0 195 331 110 24 chr17 79103437 79103564 -6334916 - MIR SINE MIR -114 148 11 348 211 15 8 chr17 79103589 79103722 -6334758 + (TG)n Simple_repeat Simple_repeat 2 135 0 220 189 11 133 chr17 79103957 79104047 -6334433 - MIR SINE MIR -48 160 81 1941 121 66 3 chr17 79104110 79104399 -6334081 + AluSx SINE Alu 1 307 -5 1739 165 10 16 chr17 79104400 79104531 -6333949 + AluSx SINE Alu 3 133 -179 2109 76 3 88 chr17 79104531 79104873 -6333607 + AluSp SINE Alu 1 313 0 1739 165 10 16 chr17 79104873 79105050 -6333430 + AluSx SINE Alu 133 309 -3 288 186 0 17 chr17 79105157 79105216 -6333264 - MER69 DNA AcHobo 0 2526 2469 510 134 144 10 chr17 79105218 79105315 -6333165 - FRAM SINE Alu -9 167 58 2244 94 0 3 chr17 79105346 79105645 -6332835 + AluSq SINE Alu 1 298 -15 548 273 13 0 chr17 79105685 79105839 -6332641 - MER69 DNA AcHobo -1002 224 69 1836 156 3 3 chr17 79106146 79106454 -6332026 - AluSx SINE Alu -1 311 4 908 110 0 22 chr17 79106582 79106718 -6331762 + FLAM_C SINE Alu 11 143 0 333 83 0 0 chr17 79106784 79106832 -6331648 + FLAM_A SINE Alu 62 109 -24 1244 202 32 24 chr17 79106833 79107085 -6331395 - AluJb SINE Alu -38 274 21 2279 65 0 26 chr17 79107182 79107488 -6330992 + AluY SINE Alu 1 298 -13 2112 76 28 0 chr17 79107498 79107786 -6330694 + AluSq SINE Alu 1 296 -17 1574 127 8 12 chr17 79107809 79108062 -6330418 + AluSx SINE Alu 55 306 -6 606 227 216 37 chr17 79108078 79108389 -6330091 - LTR50 LTR ERVL -323 472 80 1980 136 0 22 chr17 79108389 79108706 -6329774 + AluSx SINE Alu 3 312 0 606 227 216 37 chr17 79108706 79108759 -6329721 - LTR50 LTR ERVL -715 80 40 501 227 17 62 chr17 79108759 79109020 -6329460 + MLT1B LTR MaLR 1 248 -219 2189 62 23 32 chr17 79109159 79109467 -6329013 - AluY SINE Alu -6 305 1 564 280 96 46 chr17 79111422 79111661 -6326819 - MIR SINE MIR 0 262 12 2316 87 0 3 chr17 79112272 79112582 -6325898 - AluSg SINE Alu -1 309 1 2159 107 3 7 chr17 79113000 79113298 -6325182 + AluSq SINE Alu 1 297 -16 2065 90 7 33 chr17 79113587 79113887 -6324593 + AluSg SINE Alu 1 292 -18 2173 92 7 3 chr17 79113904 79114199 -6324281 + AluSg SINE Alu 1 296 -14 1059 201 0 0 chr17 79114651 79114820 -6323660 + FAM SINE Alu 1 169 -6 1929 110 11 14 chr17 79114849 79115163 -6323317 - AluSc SINE Alu 0 313 1 944 120 0 0 chr17 79115166 79115299 -6323181 - AluSq/x SINE Alu -180 133 1 356 225 25 33 chr17 79115302 79115422 -6323058 + MER53 DNA DNA 64 182 -7 2390 65 7 0 chr17 79116066 79116372 -6322108 + AluY SINE Alu 1 308 -3 977 117 0 14 chr17 79116537 79116682 -6321798 - FLAM_C SINE Alu 0 143 1 2202 95 0 7 chr17 79116693 79116999 -6321481 - AluSq SINE Alu -9 304 1 1794 157 7 3 chr17 79117830 79118117 -6320363 + AluJb SINE Alu 6 293 -19 225 163 0 0 chr17 79118273 79118316 -6320164 + Alu SINE Alu 1 43 -260 234 0 0 0 chr17 79119391 79119417 -6319063 + (CGGGGG)n Simple_repeat Simple_repeat 5 30 0 426 131 37 75 chr17 79120863 79120970 -6317510 - AluJo/FRAM SINE Alu 0 312 210 1909 120 4 0 chr17 79120972 79121239 -6317241 - AluSx SINE Alu -44 268 1 1876 91 13 58 chr17 79121247 79121556 -6316924 - AluSx SINE Alu -17 295 1 684 138 15 77 chr17 79121576 79121706 -6316774 - AluJb SINE Alu -190 122 1 2289 91 3 0 chr17 79122009 79122333 -6316147 + AluSc SINE Alu 1 325 0 2013 108 39 20 chr17 79124521 79124826 -6313654 + AluSx SINE Alu 1 311 -1 225 306 0 0 chr17 79125863 79125925 -6312555 - MER117 DNA MER1_type -37 160 99 1316 114 0 10 chr17 79126024 79126217 -6312263 + AluSg/x SINE Alu 122 312 0 705 194 89 13 chr17 79126238 79126464 -6312016 - MER33 DNA MER1_type -88 236 1 564 306 91 16 chr17 79126699 79126941 -6311539 + MIR SINE MIR 1 260 -2 452 118 306 0 chr17 79129358 79129443 -6309037 + FLAM_C SINE Alu 17 127 -16 2244 89 0 0 chr17 79129449 79129740 -6308740 + AluSc SINE Alu 1 291 -18 2317 62 3 3 chr17 79134461 79134753 -6303727 - AluY SINE Alu -19 292 1 907 196 0 18 chr17 79134758 79134921 -6303559 - AluJb SINE Alu -16 296 137 2154 87 7 7 chr17 79135084 79135382 -6303098 - AluSc SINE Alu -11 298 1 180 0 0 0 chr17 79135655 79135675 -6302805 + (T)n Simple_repeat Simple_repeat 1 20 0 2346 62 3 7 chr17 79135735 79136040 -6302440 - AluY SINE Alu -7 304 1 2316 88 3 0 chr17 79136212 79136517 -6301963 + AluSg SINE Alu 3 308 -2 422 305 26 7 chr17 79136698 79136849 -6301631 + MIR3 SINE MIR 53 206 -2 1736 176 10 3 chr17 79138273 79138562 -6299918 - AluJb SINE Alu -21 291 1 2230 102 3 0 chr17 79138568 79138873 -6299607 - AluSx SINE Alu -6 306 1 306 299 128 0 chr17 79138875 79138992 -6299488 - L1ME4a LINE L1 -56 6065 5934 289 308 182 6 chr17 79140011 79140170 -6298310 - MIR SINE MIR -40 222 36 2110 122 3 0 chr17 79141146 79141442 -6297038 + AluSx SINE Alu 1 297 -15 230 95 24 0 chr17 79141449 79141491 -6296989 + (CA)n Simple_repeat Simple_repeat 2 44 0 418 214 20 0 chr17 79142039 79142137 -6296343 - Tigger7 DNA MER2_type -3 2488 2389 1181 191 65 16 chr17 79142145 79142391 -6296089 - Tigger7 DNA MER2_type -475 258 1 2174 100 3 0 chr17 79142472 79142763 -6295717 + AluSg SINE Alu 1 292 -18 741 175 0 0 chr17 79142923 79143037 -6295443 - FLAM_C SINE Alu -25 118 5 473 71 0 0 chr17 79143090 79143146 -6295334 - AluSc SINE Alu -137 172 117 2000 124 30 0 chr17 79143202 79143500 -6294980 + AluSq SINE Alu 1 307 -6 1550 146 0 66 chr17 79143501 79143788 -6294692 + AluJo SINE Alu 1 268 -44 790 182 8 0 chr17 79143922 79144054 -6294426 + FLAM_C SINE Alu 1 133 0 1714 172 10 7 chr17 79144058 79144354 -6294126 + AluJo SINE Alu 1 297 -15 29 0 0 0 chr17 79144360 79144389 -6294091 + AT_rich Low_complexity Low_complexity 1 29 0 233 79 79 13 chr17 79144430 79144506 -6293974 + (TA)n Simple_repeat Simple_repeat 1 81 0 2052 123 0 0 chr17 79144506 79144791 -6293689 - AluSx SINE Alu -27 285 1 246 286 16 0 chr17 79144817 79144880 -6293600 - L2 LINE L2 -45 3268 3205 258 136 0 0 chr17 79144940 79144984 -6293496 + L1MB3 LINE L1 5624 5667 -504 1889 127 16 16 chr17 79144984 79145292 -6293188 + AluSq SINE Alu 1 308 -5 1700 136 83 40 chr17 79145296 79145630 -6292850 + L1MB3 LINE L1 5782 6135 -48 2153 89 34 0 chr17 79145630 79145922 -6292558 + AluSc SINE Alu 1 302 -7 1700 136 83 40 chr17 79145922 79145962 -6292518 + L1MB3 LINE L1 6135 6172 -11 206 315 79 70 chr17 79146148 79146320 -6292160 - L2 LINE L2 -426 2888 2712 1887 141 0 36 chr17 79146320 79146624 -6291856 + AluSg SINE Alu 1 293 -17 206 315 79 70 chr17 79146624 79146692 -6291788 - L2 LINE L2 -602 2712 2646 2228 58 14 7 chr17 79147453 79147744 -6290736 + AluY SINE Alu 1 293 -18 231 133 0 0 chr17 79147827 79147872 -6290608 + (TTA)n Simple_repeat Simple_repeat 2 46 0 1737 153 13 36 chr17 79148276 79148418 -6290062 + AluJb SINE Alu 1 145 -167 1800 138 47 10 chr17 79148418 79148714 -6289766 + AluJb SINE Alu 1 307 -5 1737 153 13 36 chr17 79148714 79148878 -6289602 + AluJb SINE Alu 145 300 -12 437 290 31 93 chr17 79148882 79148955 -6289525 - MIR SINE MIR 0 262 186 732 203 0 0 chr17 79148955 79149088 -6289392 - FLAM_C SINE Alu 0 133 1 437 290 31 93 chr17 79149088 79149273 -6289207 - MIR SINE MIR -76 186 20 325 174 47 35 chr17 79150273 79150359 -6288121 + HY3 scRNA scRNA 14 100 -1 419 305 84 30 chr17 79150563 79150730 -6287750 - MIR SINE MIR -84 178 3 181 318 70 65 chr17 79151168 79151222 -6287258 - L2 LINE L2 -565 2749 2697 2197 123 0 7 chr17 79151222 79151532 -6286948 + AluSx SINE Alu 1 308 -4 181 318 70 65 chr17 79151532 79151678 -6286802 - L2 LINE L2 -617 2697 2548 2365 96 0 3 chr17 79152054 79152366 -6286114 + AluSx SINE Alu 1 311 -1 2622 45 0 0 chr17 79152410 79152720 -6285760 + AluY SINE Alu 2 311 0 298 311 39 78 chr17 79155616 79155822 -6282658 + MIR SINE MIR 51 248 -14 231 88 0 0 chr17 79158127 79158161 -6280319 + (CACCC)n Simple_repeat Simple_repeat 5 38 0 267 260 276 0 chr17 79160916 79161039 -6277441 - MIR SINE MIR -18 244 88 1862 93 4 35 chr17 79162848 79163107 -6275373 - AluSx SINE Alu -18 294 44 980 142 7 0 chr17 79163108 79163263 -6275217 - FRAM SINE Alu -9 157 2 225 292 34 0 chr17 79164757 79164846 -6273634 + (CATA)n Simple_repeat Simple_repeat 2 93 0 368 233 133 22 chr17 79164846 79164936 -6273544 - L1MC4 LINE L1 -1335 6707 6608 2362 96 0 6 chr17 79167520 79167832 -6270648 + AluSg SINE Alu 1 310 0 870 104 0 0 chr17 79167855 79167970 -6270510 + AluSg/x SINE Alu 180 294 -16 1626 178 4 4 chr17 79168030 79168306 -6270174 + AluJo SINE Alu 23 298 -14 2294 115 0 28 chr17 79168308 79168629 -6269851 + AluSx SINE Alu 1 312 0 207 0 0 0 chr17 79169939 79169962 -6268518 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 526 169 54 42 chr17 79170345 79170511 -6267969 + L1MB7 LINE L1 6017 6184 0 2438 80 0 3 chr17 79172014 79172313 -6266167 + AluSq SINE Alu 1 298 -15 1093 187 61 22 chr17 79172323 79172553 -6265927 + MIR SINE MIR 1 239 -23 2206 111 0 3 chr17 79172979 79173298 -6265182 - AluSx SINE Alu 0 318 1 1649 168 34 34 chr17 79173978 79174276 -6264204 - AluJo SINE Alu -14 298 1 2195 136 3 0 chr17 79174883 79175192 -6263288 - AluSx SINE Alu -2 310 1 2441 76 10 7 chr17 79175724 79176026 -6262454 - AluSx SINE Alu -9 303 1 373 153 0 0 chr17 79176026 79176085 -6262395 - AluSg/x SINE Alu -166 134 76 1324 179 0 28 chr17 79176085 79176303 -6262177 - AluSx SINE Alu -100 212 1 350 194 65 0 chr17 79176381 79176443 -6262037 + AluJb SINE Alu 1 66 -236 2462 67 3 3 chr17 79176443 79176741 -6261739 + AluY SINE Alu 2 299 -12 1505 149 26 4 chr17 79176741 79176969 -6261511 + AluJb SINE Alu 56 288 -24 675 131 88 0 chr17 79177503 79177640 -6260840 + BC200 scRNA scRNA 7 155 -45 582 196 171 6 chr17 79177653 79177726 -6260754 + MER58 DNA MER1_type 1 61 -280 1972 148 3 7 chr17 79177726 79178023 -6260457 - AluJb SINE Alu -12 300 5 582 196 171 6 chr17 79178023 79178107 -6260373 + MER58 DNA MER1_type 61 184 -157 2070 144 3 0 chr17 79178113 79178419 -6260061 + AluSg1 SINE Alu 1 307 -2 303 287 0 11 chr17 79178691 79178785 -6259695 + (TG)n Simple_repeat Simple_repeat 1 93 0 225 299 23 23 chr17 79178942 79179029 -6259451 + MIR SINE MIR 104 190 -72 913 167 0 0 chr17 79180258 79180396 -6258084 - FRAM SINE Alu -17 159 22 692 149 179 0 chr17 79180549 79180683 -6257797 - FRAM SINE Alu -22 154 1 2456 74 3 0 chr17 79181132 79181428 -6257052 + AluSg SINE Alu 1 297 -13 24 53 0 0 chr17 79181548 79181586 -6256894 + AT_rich Low_complexity Low_complexity 1 38 0 2348 103 3 19 chr17 79182107 79182282 -6256198 - AluSg SINE Alu -4 306 130 372 22 0 0 chr17 79182282 79182327 -6256153 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 2397 74 0 3 chr17 79182327 79182611 -6255869 - AluY SINE Alu -27 284 2 2348 103 3 19 chr17 79182611 79182745 -6255735 - AluSg SINE Alu -178 132 1 1332 120 0 11 chr17 79182812 79182987 -6255493 - AluY SINE Alu -4 307 133 1893 132 7 27 chr17 79182987 79183282 -6255198 - AluSq SINE Alu -16 297 9 1332 120 0 11 chr17 79183282 79183297 -6255183 - AluY SINE Alu -178 133 119 1357 149 43 43 chr17 79183300 79183555 -6254925 - AluJb SINE Alu 0 312 58 2499 95 3 42 chr17 79183867 79183935 -6254545 - THE1B LTR MaLR 0 364 295 2683 58 0 0 chr17 79183935 79184244 -6254236 - AluY SINE Alu -2 309 1 2499 95 3 42 chr17 79184244 79184554 -6253926 - THE1B LTR MaLR -69 295 1 797 277 88 24 chr17 79184602 79184898 -6253582 + HAL1 LINE L1 1477 1791 -716 1105 199 164 0 chr17 79184940 79185196 -6253284 + AluJb SINE Alu 1 298 -4 2300 84 31 0 chr17 79185259 79185546 -6252934 + AluSg SINE Alu 1 296 -14 2018 123 0 39 chr17 79185558 79185867 -6252613 + AluJb SINE Alu 5 301 -11 250 283 84 78 chr17 79185894 79186007 -6252473 + HAL1 LINE L1 2332 2443 -64 2448 80 0 3 chr17 79186007 79186309 -6252171 - AluSp SINE Alu -12 301 1 250 283 84 78 chr17 79186309 79186321 -6252159 + HAL1 LINE L1 2443 2453 -54 1589 146 12 4 chr17 79186321 79186586 -6251894 - AluSx SINE Alu 0 310 44 250 283 84 78 chr17 79186586 79186624 -6251856 + HAL1 LINE L1 2453 2498 -9 2614 50 0 0 chr17 79186658 79186959 -6251521 + AluY SINE Alu 1 301 -10 2008 153 3 0 chr17 79187069 79187377 -6251103 + AluSx SINE Alu 1 309 -3 748 158 31 0 chr17 79187493 79187620 -6250860 - FLAM_C SINE Alu -2 131 1 2346 97 0 3 chr17 79187977 79188277 -6250203 + AluSx SINE Alu 1 299 -13 238 316 0 32 chr17 79188641 79188736 -6249744 + L2 LINE L2 2943 3034 -238 1337 203 72 14 chr17 79188803 79189148 -6249332 + MLT1A1 LTR MaLR 1 365 0 2088 96 53 20 chr17 79189219 79189520 -6248960 - AluSx SINE Alu 0 312 2 1300 216 36 41 chr17 79189847 79190029 -6248451 + MLT1C LTR MaLR 1 182 -285 714 125 92 0 chr17 79190029 79190149 -6248331 + FLAM_C SINE Alu 3 133 0 1300 216 36 41 chr17 79190149 79190331 -6248149 + MLT1C LTR MaLR 182 363 -104 470 219 0 9 chr17 79190328 79190433 -6248047 + Charlie4 DNA MER1_type 93 196 -1765 * 2433 93 0 0 chr17 79190433 79190734 -6247746 + AluSq SINE Alu 3 303 -10 594 152 65 0 chr17 79190735 79190873 -6247607 - L1MC3 LINE L1 -695 7090 6944 266 232 89 0 chr17 79190889 79190999 -6247481 - L1ME2 LINE L1 -1 6183 6055 2304 87 10 3 chr17 79191128 79191426 -6247054 + AluSq SINE Alu 1 300 -13 21 57 0 0 chr17 79191800 79191835 -6246645 + GC_rich Low_complexity Low_complexity 1 35 0 1878 106 4 0 chr17 79192801 79193047 -6245433 + AluSx SINE Alu 59 305 -7 806 159 0 0 chr17 79193298 79193424 -6245056 - FLAM_C SINE Alu -6 127 2 2363 84 10 0 chr17 79193673 79193970 -6244510 - AluSg SINE Alu -10 300 1 1952 121 0 41 chr17 79193970 79194285 -6244195 - AluJo SINE Alu -10 302 1 2211 91 10 10 chr17 79195875 79196183 -6242297 + AluSg SINE Alu 1 308 -2 1709 117 91 4 chr17 79196696 79196961 -6241519 + AluSg SINE Alu 12 299 -11 1395 186 11 39 chr17 79196971 79197256 -6241224 + AluJo SINE Alu 1 277 -35 1907 156 7 10 chr17 79197674 79197975 -6240505 + AluJb SINE Alu 1 300 -12 2273 87 0 20 chr17 79198473 79198771 -6239709 - AluSx SINE Alu -20 292 1 1953 166 0 6 chr17 79200583 79200896 -6237584 - AluJb SINE Alu -1 311 1 515 203 34 161 chr17 79200910 79200975 -6237505 + L1MC5 LINE L1 7698 7770 -191 2170 77 4 0 chr17 79200975 79201234 -6237246 - AluSp SINE Alu -14 299 40 515 203 34 161 chr17 79201234 79201404 -6237076 + L1MC5 LINE L1 7770 7903 -58 189 0 0 0 chr17 79201413 79201434 -6237046 + (TG)n Simple_repeat Simple_repeat 2 22 0 1776 114 33 59 chr17 79201438 79201744 -6236736 - AluSq SINE Alu -15 298 1 2335 99 17 0 chr17 79202274 79202576 -6235904 - AluSp SINE Alu -6 307 1 2242 107 13 13 chr17 79202577 79202886 -6235594 - AluSx SINE Alu -3 309 1 2002 120 0 54 chr17 79203661 79203978 -6234502 - AluSq SINE Alu -13 300 1 2003 111 14 24 chr17 79203978 79204275 -6234205 - AluSq SINE Alu -19 294 1 779 243 58 5 chr17 79205328 79205534 -6232946 - MIR SINE MIR 0 262 46 1066 121 17 11 chr17 79205534 79205708 -6232772 - AluSg/x SINE Alu -6 306 132 2101 129 17 0 chr17 79206022 79206317 -6232163 - AluSx SINE Alu -12 300 1 811 176 0 42 chr17 79206329 79206352 -6232128 - AluJb SINE Alu -176 136 114 1730 105 0 4 chr17 79206352 79206580 -6231900 + AluSg/x SINE Alu 80 306 -4 811 176 0 42 chr17 79206580 79206698 -6231782 - AluJb SINE Alu -198 114 1 251 143 0 18 chr17 79307391 79307447 -6131033 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 313 338 86 25 chr17 79307830 79308028 -6130452 + MIR SINE MIR 41 250 -12 2019 129 3 3 chr17 79308261 79308548 -6129932 - AluJb SINE Alu -25 287 1 2409 80 7 3 chr17 79308614 79308915 -6129565 - AluY SINE Alu -9 302 1 2188 89 11 0 chr17 79308930 79309231 -6129249 - AluSq SINE Alu 0 304 1 1130 134 12 0 chr17 79309233 79309405 -6129075 - AluSg/x SINE Alu -10 302 129 1381 164 15 103 chr17 79309526 79309867 -6128613 + AluJb SINE Alu 1 311 -1 585 165 8 50 chr17 79310154 79310275 -6128205 - FLAM_A SINE Alu -17 125 10 216 86 0 0 chr17 79310375 79310410 -6128070 + (TA)n Simple_repeat Simple_repeat 1 35 0 2326 119 0 0 chr17 79310488 79310799 -6127681 + AluSx SINE Alu 1 311 -1 2199 113 27 0 chr17 79310815 79311107 -6127373 + AluSx SINE Alu 1 300 -12 2183 123 0 0 chr17 79311176 79311488 -6126992 + AluSx SINE Alu 1 312 0 1141 76 0 0 chr17 79311489 79311634 -6126846 + AluSc SINE Alu 165 309 0 1707 75 0 14 chr17 79311750 79311962 -6126518 - AluY SINE Alu -102 209 1 770 155 6 60 chr17 79311964 79312132 -6126348 + L1M LINE L1 5269 5427 -917 1917 122 65 17 chr17 79312142 79312436 -6126044 - AluJb SINE Alu -4 308 1 1025 218 176 4 chr17 79312436 79312697 -6125783 - AluJo SINE Alu -6 306 1 3253 146 19 40 chr17 79312697 79313087 -6125393 + L1MC2 LINE L1 5176 5573 -771 2367 94 3 0 chr17 79313087 79313384 -6125096 + AluSg SINE Alu 1 298 -12 3253 146 19 40 chr17 79313384 79313410 -6125070 + L1MC2 LINE L1 5573 5598 -746 2286 113 0 0 chr17 79313410 79313703 -6124777 + AluSx SINE Alu 9 301 -11 3253 146 19 40 chr17 79313703 79314635 -6123845 + L1MC2 LINE L1 5598 6152 -192 1620 128 52 107 chr17 79314635 79314748 -6123732 + THE1B LTR MaLR 14 132 -232 852 203 6 0 chr17 79314748 79314911 -6123569 - FRAM SINE Alu -2 164 1 1620 128 52 107 chr17 79314911 79315180 -6123300 + THE1B LTR MaLR 132 364 0 3237 84 49 65 chr17 79315180 79315573 -6122907 + L1MA3 LINE L1 5741 6139 -166 2506 50 3 7 chr17 79315573 79315871 -6122609 + AluY SINE Alu 1 297 -14 2449 88 0 0 chr17 79315876 79316182 -6122298 + AluSx SINE Alu 1 306 -6 3237 84 49 65 chr17 79316182 79316199 -6122281 + L1MA3 LINE L1 6143 6159 -146 2341 104 0 13 chr17 79316199 79316515 -6121965 + AluSx SINE Alu 1 312 0 3237 84 49 65 chr17 79316515 79316671 -6121809 + L1MA3 LINE L1 6159 6305 0 482 107 0 24 chr17 79316688 79316772 -6121708 + L1MC2 LINE L1 6133 6214 -130 524 131 0 0 chr17 79316772 79316856 -6121624 - AluJo SINE Alu -15 297 214 902 189 0 13 chr17 79316856 79317015 -6121465 - AluJo SINE Alu -155 157 1 423 190 26 52 chr17 79317016 79317132 -6121348 + L1MC2 LINE L1 6209 6321 -23 404 206 0 0 chr17 79317136 79317204 -6121276 + AluJ/FLAM SINE Alu 2 69 -243 2122 76 52 31 chr17 79317428 79317718 -6120762 + AluSp SINE Alu 1 296 -17 252 0 0 0 chr17 79317718 79317746 -6120734 + (TA)n Simple_repeat Simple_repeat 2 29 0 189 0 0 0 chr17 79317746 79317767 -6120713 + (T)n Simple_repeat Simple_repeat 1 21 0 2092 104 27 30 chr17 79317767 79318065 -6120415 + AluSx SINE Alu 1 297 -15 1367 89 0 59 chr17 79318066 79318269 -6120211 + AluY SINE Alu 107 297 -14 2492 95 0 0 chr17 79318277 79318583 -6119897 + AluSg SINE Alu 1 306 -4 1935 108 4 0 chr17 79320692 79320941 -6117539 + AluSq SINE Alu 33 282 -31 2162 113 7 3 chr17 79321912 79322203 -6116277 + AluSg SINE Alu 1 292 -18 2410 80 23 3 chr17 79322205 79322505 -6115975 + AluSg SINE Alu 3 308 -2 2178 103 7 4 chr17 79322572 79322873 -6115607 + AluSx SINE Alu 1 302 0 943 133 0 0 chr17 79323904 79324032 -6114448 - AluJb SINE Alu -184 128 1 3027 138 28 116 chr17 79324320 79325078 -6113402 + LTR8 LTR ERV1 1 691 0 249 273 98 49 chr17 79326451 79326594 -6111886 - MIR SINE MIR -10 252 103 216 0 0 0 chr17 79327573 79327597 -6110883 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 633 317 73 12 chr17 79327667 79327913 -6110567 - MIR SINE MIR 0 262 2 2257 76 31 3 chr17 79328355 79328646 -6109834 - AluY SINE Alu -12 299 1 214 255 264 9 chr17 79328781 79328820 -6109660 - MER5A DNA MER1_type -30 159 131 1907 136 3 50 chr17 79328820 79329137 -6109343 + AluJo SINE Alu 7 308 -4 214 255 264 9 chr17 79329137 79329203 -6109277 - MER5A DNA MER1_type -58 131 27 627 218 40 46 chr17 79329231 79329405 -6109075 + MER5B DNA MER1_type 1 173 -5 2192 96 3 20 chr17 79330586 79330887 -6107593 - AluSp SINE Alu -16 297 2 558 200 48 21 chr17 79332352 79332497 -6105983 + FRAM SINE Alu 28 176 0 2366 90 0 10 chr17 79332508 79332807 -6105673 + AluY SINE Alu 1 296 -15 536 181 0 0 chr17 79332810 79332904 -6105576 + AluSc SINE Alu 135 228 -81 719 214 210 48 chr17 79332967 79333215 -6105265 - AluSc SINE Alu -10 289 2 1980 164 0 16 chr17 79333350 79333662 -6104818 + AluJo SINE Alu 1 307 -5 34 24 0 0 chr17 79333707 79333748 -6104732 + AT_rich Low_complexity Low_complexity 1 41 0 1343 206 130 37 chr17 79334193 79334654 -6103826 + MLT1D LTR MaLR 1 504 -1 608 167 62 19 chr17 79334914 79335076 -6103404 + L1MB3 LINE L1 6010 6178 -5 272 258 135 6 chr17 79335510 79335673 -6102807 + Charlie7 DNA MER1_type 2429 2612 0 2890 13 0 3 chr17 79336583 79336895 -6101585 - AluYa5 SINE Alu 0 311 1 390 210 287 36 chr17 79338036 79338135 -6100345 + MER3 DNA MER1_type 1 74 -135 1817 123 98 0 chr17 79338135 79338411 -6100069 - AluSx SINE Alu -9 303 1 390 210 287 36 chr17 79338411 79338478 -6100002 + MER3 DNA MER1_type 74 209 0 1192 77 10 71 chr17 79338673 79338753 -6099727 + L1PA8 LINE L1 5987 6070 -102 2632 47 0 0 chr17 79338753 79339052 -6099428 + AluY SINE Alu 1 299 -12 1192 77 10 71 chr17 79339052 79339167 -6099313 + L1PA8 LINE L1 6070 6170 -2 2022 149 0 13 chr17 79339211 79339519 -6098961 + AluJb SINE Alu 2 305 -7 22 35 0 0 chr17 79340692 79340721 -6097759 + AT_rich Low_complexity Low_complexity 1 29 0 1862 101 112 8 chr17 79340799 79341067 -6097413 + AluY SINE Alu 1 296 -15 1936 145 10 19 chr17 79341096 79341406 -6097074 - AluJb SINE Alu 0 312 6 2162 135 7 0 chr17 79342977 79343274 -6095206 - AluSx SINE Alu -13 299 1 1698 145 0 79 chr17 79343281 79343456 -6095024 - AluJo SINE Alu -22 290 148 1625 141 122 11 chr17 79343456 79343719 -6094761 - AluSg1 SINE Alu -17 292 1 1698 145 0 79 chr17 79343719 79343847 -6094633 - AluJo SINE Alu -164 148 11 466 252 199 8 chr17 79343964 79344240 -6094240 + L1ME LINE L1 5496 5824 -297 1425 171 21 36 chr17 79344277 79344558 -6093922 + AluJo SINE Alu 22 298 -14 2285 99 3 0 chr17 79344561 79344855 -6093625 + AluSc SINE Alu 1 295 -14 701 160 153 7 chr17 79344961 79345111 -6093369 + AluSg/x SINE Alu 134 305 -7 2543 74 0 3 chr17 79345143 79345455 -6093025 + AluY SINE Alu 1 311 0 1582 160 17 3 chr17 79345859 79346147 -6092333 + L1MC1 LINE L1 6029 6320 -13 855 146 7 7 chr17 79346980 79347117 -6091363 + AluJo SINE Alu 1 137 -175 1571 166 28 63 chr17 79347159 79347306 -6091174 + AluJo SINE Alu 1 152 -160 2245 110 7 7 chr17 79347306 79347606 -6090874 + AluSx SINE Alu 1 300 -12 1571 166 28 63 chr17 79347606 79347777 -6090703 + AluJo SINE Alu 152 308 -4 278 43 101 0 chr17 79347784 79347853 -6090627 + (TA)n Simple_repeat Simple_repeat 2 77 0 2322 112 0 0 chr17 79348700 79348996 -6089484 + AluSx SINE Alu 6 301 -11 411 259 58 30 chr17 79349000 79349198 -6089282 + MIR SINE MIR 2 262 0 1753 151 62 21 chr17 79349304 79349595 -6088885 + AluJo SINE Alu 1 303 -9 589 145 57 24 chr17 79350053 79350177 -6088303 - MER58A DNA MER1_type 0 152 25 2351 105 0 0 chr17 79350295 79350591 -6087889 - AluSq SINE Alu -17 296 1 228 333 0 24 chr17 79350602 79350686 -6087794 + MIR SINE MIR 90 171 -91 1823 159 35 7 chr17 79351039 79351329 -6087151 - AluJo SINE Alu -14 298 1 2057 104 7 7 chr17 79351916 79352195 -6086285 + AluSx SINE Alu 1 279 -33 384 77 0 0 chr17 79352195 79352247 -6086233 + (CA)n Simple_repeat Simple_repeat 1 52 0 417 123 0 0 chr17 79353770 79353835 -6084645 + (CCG)n Simple_repeat Simple_repeat 2 66 0 463 269 74 7 chr17 79354511 79354660 -6083820 + MIR SINE MIR 32 190 -72 271 284 12 0 chr17 79354775 79354856 -6083624 - MIR SINE MIR -70 192 111 2425 89 0 0 chr17 79354945 79355248 -6083232 + AluSx SINE Alu 1 303 -9 1028 118 0 0 chr17 79355249 79355393 -6083087 + AluSg/x SINE Alu 135 278 -34 203 30 0 61 chr17 79356938 79356971 -6081509 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 222 195 0 0 chr17 79357545 79357586 -6080894 + C-rich Low_complexity Low_complexity 2 42 0 22 0 0 0 chr17 79359041 79359063 -6079417 + GC_rich Low_complexity Low_complexity 1 22 0 1754 82 61 78 chr17 79359231 79359525 -6078955 - AluSq SINE Alu 0 313 25 1627 176 26 0 chr17 79359576 79359848 -6078632 - AluJo SINE Alu -31 281 3 203 133 0 0 chr17 79373334 79373364 -6065116 + (CACCG)n Simple_repeat Simple_repeat 3 32 0 2306 91 7 10 chr17 79373370 79373679 -6064801 - AluSx SINE Alu -4 308 1 983 158 6 6 chr17 79375828 79375993 -6062487 - AluJb SINE Alu -13 299 135 2002 136 7 3 chr17 79376047 79376341 -6062139 - AluSx SINE Alu -17 295 1 1125 143 0 0 chr17 79376353 79376514 -6061966 - AluSp SINE Alu -16 297 137 419 312 112 58 chr17 79376548 79377008 -6061472 + L1MB3 LINE L1 5293 5787 -377 2418 59 0 16 chr17 79377222 79377527 -6060953 + AluY SINE Alu 1 300 -11 466 259 21 0 chr17 79377598 79377741 -6060739 + L1MB8 LINE L1 5129 5274 -872 * 1403 183 8 47 chr17 79377721 79377866 -6060614 + L1MB8 LINE L1 5640 5789 -389 2360 89 0 9 chr17 79377866 79378182 -6060298 + AluSq SINE Alu 1 313 0 1403 183 8 47 chr17 79378182 79378397 -6060083 + L1MB8 LINE L1 5789 5986 -192 1552 209 7 13 chr17 79378462 79378769 -6059711 + AluJo SINE Alu 4 308 -4 809 203 74 21 chr17 79378781 79378988 -6059492 + L1MB3 LINE L1 5928 6151 -32 1988 106 17 33 chr17 79378988 79379290 -6059190 + AluSq SINE Alu 1 297 -16 809 203 74 21 chr17 79379290 79379324 -6059156 + L1MB3 LINE L1 6151 6182 -1 1867 107 70 0 chr17 79379353 79379652 -6058828 + AluSx SINE Alu 1 318 0 49 60 0 0 chr17 79379665 79379749 -6058731 + AT_rich Low_complexity Low_complexity 1 84 0 638 158 0 0 chr17 79380166 79380261 -6058219 - FLAM_C SINE Alu -28 115 21 412 274 18 9 chr17 79380603 79380716 -6057764 + L2 LINE L2 3150 3263 -9 1499 168 62 14 chr17 79380935 79381050 -6057430 + AluJo SINE Alu 1 109 -203 408 20 0 0 chr17 79381050 79381099 -6057381 + (CA)n Simple_repeat Simple_repeat 2 50 0 1499 168 62 14 chr17 79381099 79381274 -6057206 + AluJo SINE Alu 109 305 -7 448 347 94 14 chr17 79381384 79381597 -6056883 - MIR SINE MIR -12 250 21 2128 110 0 10 chr17 79383204 79383513 -6054967 - AluSx SINE Alu -6 306 1 2193 104 10 0 chr17 79383892 79384201 -6054279 - AluSp SINE Alu -1 312 1 201 152 0 0 chr17 79384212 79384245 -6054235 + L2 LINE L2 3261 3293 -20 2221 88 16 20 chr17 79385017 79385322 -6053158 - AluSq SINE Alu -9 304 1 1939 162 0 7 chr17 79385498 79385807 -6052673 - AluJb SINE Alu -5 307 1 924 114 0 23 chr17 79385809 79385941 -6052539 - AluJo/FLAM SINE Alu -173 129 1 1215 121 0 0 chr17 79387430 79387596 -6050884 - AluSg/x SINE Alu -7 305 140 1972 110 3 45 chr17 79387599 79387909 -6050571 - AluSg SINE Alu -13 297 1 2296 101 0 3 chr17 79392061 79392369 -6046111 + AluSx SINE Alu 1 307 -5 2034 98 42 0 chr17 79393584 79393870 -6044610 - AluSx SINE Alu -4 308 11 244 297 47 88 chr17 79393883 79394015 -6044465 + MER5A DNA MER1_type 3 126 -63 2499 68 0 0 chr17 79394015 79394326 -6044154 - AluY SINE Alu 0 311 1 244 297 47 88 chr17 79394326 79394385 -6044095 + MER5A DNA MER1_type 126 186 -3 558 219 73 18 chr17 79394401 79394565 -6043915 - MER5B DNA MER1_type -5 173 1 373 377 81 8 chr17 79394565 79395093 -6043387 + L2 LINE L2 2140 2706 -608 204 283 67 0 chr17 79395407 79395467 -6043013 + L2 LINE L2 3233 3296 -17 532 238 25 0 chr17 79396039 79396161 -6042319 - MIR SINE MIR -87 175 51 352 248 83 23 chr17 79396999 79397132 -6041348 + MIR SINE MIR 2 142 -120 2100 126 0 7 chr17 79397144 79397454 -6041026 + AluSx SINE Alu 1 308 -4 787 182 0 8 chr17 79397779 79397911 -6040569 + AluJb SINE Alu 165 295 -17 1746 148 27 34 chr17 79397914 79398211 -6040269 + AluJb SINE Alu 1 295 -17 2206 121 0 0 chr17 79398213 79398511 -6039969 + AluSx SINE Alu 1 298 -14 384 301 44 22 chr17 79398779 79398915 -6039565 - MIR SINE MIR -109 153 15 240 337 23 0 chr17 79400562 79400648 -6037832 - MIR3 SINE MIR -25 183 96 261 261 22 50 chr17 79401031 79401211 -6037269 + (CAAAC)n Simple_repeat Simple_repeat 3 177 0 * 287 257 28 34 chr17 79401122 79401301 -6037179 + (CTAAA)n Simple_repeat Simple_repeat 1 178 0 * 436 283 11 17 chr17 79401244 79401495 -6036985 + (CAAAC)n Simple_repeat Simple_repeat 1 249 0 281 173 0 115 chr17 79401881 79401985 -6036495 - MER106A DNA MER1_type 0 236 145 836 136 0 23 chr17 79402009 79402141 -6036339 - FLAM_C SINE Alu -14 129 1 485 213 47 27 chr17 79402142 79402292 -6036188 - MER106A DNA MER1_type -79 157 5 2297 84 0 0 chr17 79402343 79402640 -6035840 - AluSx SINE Alu -15 297 1 213 195 0 0 chr17 79402696 79402737 -6035743 + (CCG)n Simple_repeat Simple_repeat 2 42 0 228 301 0 0 chr17 79402881 79402954 -6035526 + C-rich Low_complexity Low_complexity 1 73 0 289 273 80 43 chr17 79404248 79404435 -6034045 + L2 LINE L2 2862 3055 -217 181 325 150 19 chr17 79405963 79406123 -6032357 - MIR3 SINE MIR -24 184 4 746 275 40 32 chr17 79406320 79406571 -6031909 + MIR SINE MIR 9 261 -1 509 283 51 0 chr17 79406558 79406696 -6031784 + L2 LINE L2 3169 3313 0 * 1942 130 0 14 chr17 79407236 79407529 -6030951 - AluJb SINE Alu -21 291 3 1204 177 133 30 chr17 79407530 79407801 -6030679 - AluSg SINE Alu -11 299 1 2317 91 0 0 chr17 79409127 79409425 -6029055 - AluSx SINE Alu -14 298 1 2352 75 0 3 chr17 79410369 79410674 -6027806 - AluSx SINE Alu -5 307 4 467 191 19 0 chr17 79411281 79411386 -6027094 + MER33 DNA MER1_type 34 140 -184 1971 82 0 0 chr17 79411387 79411632 -6026848 + AluSg SINE Alu 1 245 -65 2445 41 3 0 chr17 79411988 79412278 -6026202 - AluY SINE Alu -20 291 1 2093 128 0 7 chr17 79412903 79413199 -6025281 - AluSx SINE Alu -18 294 1 276 265 85 33 chr17 79413521 79413707 -6024773 + MIR3 SINE MIR 2 254 -8 180 306 105 73 chr17 79414014 79414138 -6024342 + MIR SINE MIR 107 234 -28 924 0 8 17 chr17 79414277 79414395 -6024085 + (CA)n Simple_repeat Simple_repeat 1 117 0 231 36 0 0 chr17 79414632 79414660 -6023820 + (CCGGG)n Simple_repeat Simple_repeat 1 28 0 620 179 0 30 chr17 79416262 79416425 -6022055 + CT-rich Low_complexity Low_complexity 4 162 0 1855 135 13 32 chr17 79416425 79416736 -6021744 - AluSq SINE Alu -8 305 1 189 366 0 14 chr17 79416779 79416850 -6021630 + MIR SINE MIR 43 112 -96 241 287 123 0 chr17 79416852 79416974 -6021506 - L2 LINE L2 -4 3268 3132 212 266 141 0 chr17 79417077 79417141 -6021339 + MIR3 SINE MIR 109 181 -27 2145 112 0 19 chr17 79418608 79418920 -6019560 + AluSx SINE Alu 1 306 -6 234 263 21 42 chr17 79418934 79419029 -6019451 + HAL1 LINE L1 5 97 -2410 * 1587 208 39 21 chr17 79419021 79419487 -6018993 + L1ME2 LINE L1 5654 6166 0 2093 110 7 7 chr17 79419491 79419791 -6018689 + AluSg SINE Alu 1 300 -10 890 292 79 41 chr17 79420058 79420575 -6017905 + HAL1 LINE L1 416 952 -1555 541 204 29 58 chr17 79420577 79420714 -6017766 + AluSc SINE Alu 1 133 -176 261 299 208 24 chr17 79420763 79420970 -6017510 + HAL1 LINE L1 2076 2320 -187 318 167 0 0 chr17 79420985 79421039 -6017441 + Alu SINE Alu 1 54 -249 1670 106 0 8 chr17 79421157 79421394 -6017086 - AluSx SINE Alu -77 235 1 300 307 170 28 chr17 79421433 79421770 -6016710 + HAL1 LINE L1 1952 2352 -155 2165 125 0 0 chr17 79421770 79422075 -6016405 + AluSx SINE Alu 1 305 -7 300 307 170 28 chr17 79422075 79422125 -6016355 + HAL1 LINE L1 2352 2394 -113 2493 46 0 3 chr17 79422222 79422524 -6015956 + AluY SINE Alu 1 301 -10 217 204 0 0 chr17 79422575 79422589 -6015891 + A-rich Low_complexity Low_complexity 1 14 -35 1967 161 0 0 chr17 79422589 79422900 -6015580 + AluJb SINE Alu 1 311 -1 2272 107 0 3 chr17 79422904 79423213 -6015267 + AluSx SINE Alu 5 312 0 217 204 0 0 chr17 79423213 79423242 -6015238 + A-rich Low_complexity Low_complexity 16 49 0 207 245 0 0 chr17 79425726 79425779 -6012701 + C-rich Low_complexity Low_complexity 3 55 0 2049 98 46 0 chr17 79426451 79426736 -6011744 + AluSx SINE Alu 1 298 -14 186 231 77 0 chr17 79426814 79426866 -6011614 - MIR SINE MIR -128 134 79 229 328 46 8 chr17 79426866 79426997 -6011483 + L1MC4a LINE L1 7540 7675 -133 894 193 0 63 chr17 79426997 79427204 -6011276 - AluJo SINE Alu -4 308 115 2395 74 3 0 chr17 79427204 79427514 -6010966 + AluY SINE Alu 1 311 0 403 157 11 11 chr17 79427526 79427615 -6010865 + L1MC4 LINE L1 7807 7895 -147 2136 91 10 26 chr17 79427666 79427975 -6010505 + AluSx SINE Alu 1 304 -8 644 221 37 0 chr17 79428115 79428251 -6010229 - MER5B DNA MER1_type -7 171 31 191 275 0 0 chr17 79429264 79429304 -6009176 - MIR SINE MIR -55 153 114 27 29 0 0 chr17 79429508 79429542 -6008938 + AT_rich Low_complexity Low_complexity 1 34 0 208 312 0 13 chr17 79431717 79431794 -6006686 + G-rich Low_complexity Low_complexity 4 79 0 993 69 0 62 chr17 79436941 79437086 -6001394 - AluSp/q SINE Alu -13 300 165 235 312 36 95 chr17 79437162 79437383 -6001097 + MIR SINE MIR 44 251 -11 2308 42 49 0 chr17 79437501 79437786 -6000694 - AluY SINE Alu -12 299 1 474 283 128 6 chr17 79439357 79439537 -5998943 + MIR SINE MIR 32 233 -29 295 280 65 28 chr17 79439887 79439994 -5998486 + L2 LINE L2 3142 3252 -20 225 94 0 0 chr17 79440567 79440599 -5997881 + (CCA)n Simple_repeat Simple_repeat 1 32 0 2367 68 0 10 chr17 79441442 79441749 -5996731 - AluY SINE Alu -7 304 1 1853 149 3 20 chr17 79441749 79442051 -5996429 - AluJb SINE Alu -15 297 1 2411 77 3 0 chr17 79442933 79443243 -5995237 + AluSx SINE Alu 1 311 -1 2338 70 0 22 chr17 79450132 79450445 -5988035 - AluSc SINE Alu -3 306 1 180 372 85 0 chr17 79450591 79450720 -5987760 + L2 LINE L2 2919 3058 -214 237 232 18 0 chr17 79450801 79450857 -5987623 - L2 LINE L2 0 3313 3257 * 240 285 80 51 chr17 79450854 79450991 -5987489 + L2 LINE L2 3126 3266 -6 582 306 114 49 chr17 79451022 79451427 -5987053 + L2 LINE L2 2883 3313 0 412 212 0 0 chr17 79451772 79451857 -5986623 - FLAM_C SINE Alu -6 137 53 319 336 0 9 chr17 79451988 79452098 -5986382 + MIR SINE MIR 34 142 -66 353 201 172 29 chr17 79452963 79453137 -5985343 - L1ME4a LINE L1 0 6121 5923 827 153 0 0 chr17 79453181 79453299 -5985181 - FLAM_C SINE Alu -15 118 1 578 357 106 39 chr17 79453299 79454195 -5984285 - L1MC4a LINE L1 -757 5389 4887 2042 129 0 7 chr17 79456365 79456674 -5981806 - AluSx SINE Alu -5 307 1 186 296 0 0 chr17 79457791 79457879 -5980601 + A-rich Low_complexity Low_complexity 1 88 0 1784 134 72 12 chr17 79458056 79458376 -5980104 + MER44D DNA MER2_type 1 609 0 620 135 0 0 chr17 79458456 79458552 -5979928 - AluSg/x SINE Alu -1 309 214 1959 126 3 3 chr17 79458863 79459157 -5979323 - AluSx SINE Alu -18 294 1 2044 121 0 0 chr17 79459165 79459454 -5979026 - AluSx SINE Alu -23 289 1 183 156 0 0 chr17 79459709 79459741 -5978739 + GA-rich Low_complexity Low_complexity 2 33 0 2214 264 119 19 chr17 79461208 79462146 -5976334 - HAL1 LINE L1 0 2507 1476 1177 241 91 20 chr17 79462168 79462617 -5975863 - HAL1 LINE L1 -1124 1383 903 874 134 0 0 chr17 79462624 79462751 -5975729 - FLAM_C SINE Alu -16 127 1 2162 103 3 7 chr17 79462759 79463060 -5975420 - AluSx SINE Alu -12 300 1 982 227 121 22 chr17 79463084 79463397 -5975083 - HAL1 LINE L1 -1605 902 559 1304 150 10 5 chr17 79463418 79463625 -5974855 - AluJb SINE Alu -21 291 84 1616 220 72 78 chr17 79463628 79464068 -5974412 - HAL1 LINE L1 -1968 539 98 2279 92 0 0 chr17 79464068 79464371 -5974109 - AluY SINE Alu -8 303 1 2049 119 3 0 chr17 79464374 79464667 -5973813 - AluSx SINE Alu -18 294 1 1616 220 72 78 chr17 79464667 79464764 -5973716 - HAL1 LINE L1 -2411 96 1 269 186 266 18 chr17 79464825 79464938 -5973542 - MIR SINE MIR -10 252 112 21 0 0 0 chr17 79465338 79465359 -5973121 + AT_rich Low_complexity Low_complexity 1 21 0 595 165 68 0 chr17 79465386 79465489 -5972991 + AluJb SINE Alu 169 278 -34 2221 83 3 49 chr17 79465489 79465813 -5972667 + AluSp SINE Alu 1 309 -4 2546 52 0 0 chr17 79466184 79466492 -5971988 + AluY SINE Alu 1 308 -3 251 267 83 58 chr17 79467048 79467168 -5971312 - MIR SINE MIR -86 176 54 21 0 0 0 chr17 79467246 79467267 -5971213 + AT_rich Low_complexity Low_complexity 1 21 0 180 111 0 0 chr17 79468247 79468274 -5970206 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 812 255 36 33 chr17 79468357 79468659 -5969821 - L1ME LINE L1 -301 5820 5518 201 176 0 0 chr17 79469000 79469034 -5969446 + A-rich Low_complexity Low_complexity 1 34 0 181 352 93 9 chr17 79469484 79469592 -5968888 - L2 LINE L2 -224 3048 2932 21 0 0 0 chr17 79469592 79469613 -5968867 + AT_rich Low_complexity Low_complexity 1 21 0 270 264 28 0 chr17 79469730 79469802 -5968678 + MER52A LTR ERV1 1 74 -1681 323 174 141 11 chr17 79470339 79470431 -5968049 + MER52A LTR ERV1 21 124 -1631 5197 158 65 123 chr17 79470487 79471823 -5966657 + MER52A LTR ERV1 488 1755 0 620 292 18 12 chr17 79471823 79471991 -5966489 - MIR SINE MIR -29 233 65 1790 159 10 3 chr17 79472291 79472587 -5965893 + AluJo SINE Alu 1 298 -14 1927 123 10 3 chr17 79472589 79472881 -5965599 + AluSx SINE Alu 1 294 -18 298 214 0 18 chr17 79473669 79473725 -5964755 - L2 LINE L2 -15 3257 3203 823 165 8 0 chr17 79473769 79473902 -5964578 - AluJb SINE Alu -178 134 1 673 161 0 54 chr17 79473908 79474038 -5964442 - L1MB3 LINE L1 -3 6180 6058 487 262 16 16 chr17 79474194 79474316 -5964164 - MIR SINE MIR -120 142 21 2188 117 7 0 chr17 79474805 79475114 -5963366 + AluSx SINE Alu 1 311 -1 205 293 49 37 chr17 79475138 79475220 -5963260 - L2 LINE L2 -7 3265 3183 315 0 0 0 chr17 79475629 79475664 -5962816 + (TG)n Simple_repeat Simple_repeat 2 36 0 318 222 20 50 chr17 79475952 79476051 -5962429 + L1MC4 LINE L1 6614 6709 -1333 2108 60 0 25 chr17 79476137 79476418 -5962062 - AluSp SINE Alu -39 274 1 470 260 27 27 chr17 79476418 79476564 -5961916 + MER5A DNA MER1_type 44 189 0 969 128 26 0 chr17 79476632 79476788 -5961692 - FAM SINE Alu -6 43 1 360 167 17 50 chr17 79476862 79476982 -5961498 - L1MC4a LINE L1 -741 7067 6952 2076 120 0 3 chr17 79477089 79477389 -5961091 + AluSx SINE Alu 1 299 -13 2635 14 0 0 chr17 79478653 79478950 -5959530 - AluY SINE Alu -14 297 1 26 30 0 0 chr17 79479141 79479174 -5959306 + AT_rich Low_complexity Low_complexity 1 33 0 2336 89 0 3 chr17 79479405 79479718 -5958762 + AluSq SINE Alu 1 312 -1 2028 111 0 0 chr17 79479843 79480165 -5958315 + AluSx SINE Alu 5 326 0 2202 106 0 6 chr17 79480353 79480665 -5957815 - AluSg SINE Alu 0 310 1 1958 142 0 13 chr17 79480763 79481079 -5957401 - AluSx SINE Alu 0 312 1 2372 193 78 19 chr17 79481944 79482519 -5955961 + L1MD3 LINE L1 7368 7976 -19 335 320 74 20 chr17 79482539 79482701 -5955779 + MIR SINE MIR 4 175 -63 992 208 279 12 chr17 79482713 79483226 -5955254 - LTR50 LTR ERVL 0 795 57 1894 159 7 0 chr17 79483352 79483648 -5954832 - AluSx SINE Alu -14 298 1 786 122 0 24 chr17 79483688 79483811 -5954669 + AluJb SINE Alu 188 307 -5 2172 60 42 3 chr17 79483819 79484103 -5954377 + AluY SINE Alu 1 295 -16 580 140 243 0 chr17 79484111 79484218 -5954262 + FLAM_C SINE Alu 1 133 0 1640 173 0 24 chr17 79484375 79484512 -5953968 + AluJo SINE Alu 1 140 -172 2213 75 31 0 chr17 79484512 79484804 -5953676 + AluSg1 SINE Alu 1 301 -8 1640 173 0 24 chr17 79484804 79484961 -5953519 + AluJo SINE Alu 140 288 -24 302 340 103 26 chr17 79485542 79485698 -5952782 + L2 LINE L2 3101 3268 -4 465 278 16 57 chr17 79485946 79486014 -5952466 + MIR SINE MIR 8 77 -177 1418 157 80 0 chr17 79486014 79486300 -5952180 - AluJb SINE Alu -3 309 1 465 278 16 57 chr17 79486300 79486423 -5952057 + MIR SINE MIR 77 191 -63 1134 201 29 4 chr17 79487247 79487486 -5950994 - L1ME1 LINE L1 -1 6165 5921 584 299 79 58 chr17 79487829 79487915 -5950565 + HAL1 LINE L1 39 122 -2385 2422 60 0 0 chr17 79487915 79488213 -5950267 + AluY SINE Alu 1 298 -13 584 299 79 58 chr17 79488213 79488504 -5949976 + HAL1 LINE L1 122 424 -2083 * 1218 214 151 19 chr17 79488503 79488881 -5949599 + L1ME3A LINE L1 5396 5823 -347 2262 162 38 42 chr17 79488954 79489405 -5949075 + MER66B LTR ERV1 7 455 -31 1046 234 105 7 chr17 79489414 79489700 -5948780 + L1ME3A LINE L1 5847 6160 -10 988 257 87 52 chr17 79489859 79490240 -5948240 + LTR16A1 LTR ERVL 60 453 -4 330 228 40 20 chr17 79490252 79490353 -5948127 + HERV16 LTR ERVL 28 130 -4866 804 159 0 15 chr17 79490565 79490697 -5947783 + FLAM_C SINE Alu 3 132 -1 851 178 23 17 chr17 79490744 79490918 -5947562 - FRAM SINE Alu -7 169 1 617 290 99 57 chr17 79490954 79491427 -5947053 + HERV16 LTR ERVL 442 934 -4062 303 282 141 69 chr17 79491794 79492056 -5946424 + L2 LINE L2 2576 2856 -458 187 303 119 55 chr17 79492169 79492278 -5946202 + L2 LINE L2 3155 3270 -2 1585 146 16 4 chr17 79492483 79492736 -5945744 - AluJb SINE Alu -56 256 1 204 40 0 0 chr17 79492753 79492778 -5945702 + (A)n Simple_repeat Simple_repeat 1 25 0 2348 56 0 31 chr17 79493138 79493459 -5945021 + AluY SINE Alu 1 311 0 1999 139 57 14 chr17 79493482 79493834 -5944646 + L1MB2 LINE L1 5717 6083 -88 659 264 61 87 chr17 79494322 79494386 -5944094 - L1ME4a LINE L1 -4 6117 6053 1748 132 6 80 chr17 79494386 79494712 -5943768 + AluJo SINE Alu 1 302 -10 659 264 61 87 chr17 79494712 79495201 -5943279 - L1ME4a LINE L1 -68 6053 5578 387 0 0 0 chr17 79495311 79495354 -5943126 + (CA)n Simple_repeat Simple_repeat 1 43 0 1839 146 10 0 chr17 79496185 79496473 -5942007 - AluSx SINE Alu -21 291 1 257 250 25 38 chr17 79496510 79496590 -5941890 - MIR SINE MIR -121 141 63 2100 120 3 0 chr17 79496635 79496934 -5941546 - AluSq SINE Alu -13 300 1 2517 49 0 0 chr17 79496943 79497249 -5941231 - AluY SINE Alu -5 306 1 367 269 148 74 chr17 79497427 79497725 -5940755 + L2 LINE L2 2953 3272 0 2105 116 0 22 chr17 79497949 79498269 -5940211 - AluSq SINE Alu 0 313 1 207 139 0 0 chr17 79498270 79498306 -5940174 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 1790 156 30 0 chr17 79498311 79498613 -5939867 - AluJb SINE Alu 0 312 2 1843 117 53 0 chr17 79498641 79498946 -5939534 + AluSc SINE Alu 1 319 0 1400 218 10 14 chr17 79499134 79499427 -5939053 + AluJb SINE Alu 5 296 -16 1177 173 122 7 chr17 79499705 79499976 -5938504 + AluSq SINE Alu 1 302 -1 1684 173 0 23 chr17 79500316 79500622 -5937858 + AluJo SINE Alu 1 299 -13 1505 161 34 24 chr17 79501107 79501399 -5937081 - AluJo SINE Alu -11 301 7 622 252 193 14 chr17 79501518 79501736 -5936744 + MIR SINE MIR 6 262 0 2069 113 0 7 chr17 79501878 79502171 -5936309 + AluSx SINE Alu 7 297 -15 670 138 0 73 chr17 79502289 79502412 -5936068 - FLAM_A SINE Alu -19 114 1 1471 95 59 18 chr17 79502568 79502789 -5935691 - MER30 DNA MER1_type 0 230 1 24 0 0 0 chr17 79502830 79502854 -5935626 + AT_rich Low_complexity Low_complexity 1 24 0 2278 84 0 3 chr17 79502941 79503239 -5935241 - AluSc SINE Alu -11 298 2 2402 59 13 0 chr17 79503495 79503799 -5934681 + AluY SINE Alu 2 309 -2 1905 152 0 0 chr17 79503991 79504287 -5934193 - AluSx SINE Alu -16 296 1 404 167 0 0 chr17 79504351 79504417 -5934063 + L2 LINE L2 3193 3258 -14 256 284 15 0 chr17 79504746 79504813 -5933667 + MIR SINE MIR 195 262 0 198 279 200 36 chr17 79504789 79504954 -5933526 + MIR SINE MIR 71 262 0 * 743 187 91 35 chr17 79505066 79505264 -5933216 - L2 LINE L2 -2 3311 3103 2016 136 3 0 chr17 79505762 79506063 -5932417 + AluSx SINE Alu 1 302 -10 4369 163 52 51 chr17 79506394 79506471 -5932009 + MER21B LTR ERV1 1 76 -787 2182 100 3 0 chr17 79506471 79506770 -5931710 + AluSx SINE Alu 1 300 -12 4369 163 52 51 chr17 79506770 79507534 -5930946 + MER21B LTR ERV1 76 843 -20 1516 164 6 91 chr17 79508344 79508739 -5929741 + AluJo SINE Alu 1 366 0 822 130 0 0 chr17 79509649 79509764 -5928716 + AluJb SINE Alu 3 117 -195 29 0 0 0 chr17 79509765 79509794 -5928686 + AT_rich Low_complexity Low_complexity 1 29 0 1118 187 0 0 chr17 79509898 79510101 -5928379 + AluJb SINE Alu 108 310 -2 878 107 15 0 chr17 79510360 79510491 -5927989 - AluJb SINE Alu -179 133 1 688 194 29 12 chr17 79511102 79511272 -5927208 + L1MB2 LINE L1 5991 6163 -8 541 239 94 0 chr17 79511316 79511496 -5926984 + HAL1b LINE L1 292 488 -860 1680 158 28 14 chr17 79511541 79511832 -5926648 + AluJo SINE Alu 1 295 -17 2224 115 0 0 chr17 79511834 79512146 -5926334 + AluSx SINE Alu 1 312 0 21 36 0 0 chr17 79512480 79512508 -5925972 + AT_rich Low_complexity Low_complexity 1 28 0 302 197 14 14 chr17 79512513 79512584 -5925896 + L1MDa LINE L1 2490 2560 -3980 2163 246 87 66 chr17 79512585 79513725 -5924755 + L1MC5 LINE L1 5903 7107 -854 1213 167 75 65 chr17 79513725 79513860 -5924620 + AluJb SINE Alu 1 133 -179 2161 118 0 0 chr17 79513860 79514156 -5924324 + AluSg SINE Alu 1 296 -14 1213 167 75 65 chr17 79514156 79514314 -5924166 + AluJb SINE Alu 133 297 -15 2163 246 87 66 chr17 79514314 79514713 -5923767 + L1MC5 LINE L1 7107 7496 -465 2376 132 52 54 chr17 79514893 79515259 -5923221 + L1MB5 LINE L1 5697 6063 -111 1928 112 45 3 chr17 79515259 79515546 -5922934 + AluSx SINE Alu 1 299 -13 2376 132 52 54 chr17 79515546 79515658 -5922822 + L1MB5 LINE L1 6063 6174 0 401 264 47 68 chr17 79515790 79515938 -5922542 - MIR SINE MIR -102 160 16 2367 64 0 0 chr17 79516075 79516372 -5922108 - AluY SINE Alu -14 297 1 2228 101 0 0 chr17 79516372 79516670 -5921810 - AluSx SINE Alu -14 298 1 1424 125 4 46 chr17 79517797 79518037 -5920443 + MER30 DNA MER1_type 1 230 0 25 0 0 0 chr17 79518046 79518071 -5920409 + AT_rich Low_complexity Low_complexity 1 25 0 2207 114 0 0 chr17 79518072 79518379 -5920101 + AluSx SINE Alu 1 307 -5 859 134 8 0 chr17 79518391 79518525 -5919955 + FLAM_C SINE Alu 6 140 -3 26 50 0 0 chr17 79518547 79518587 -5919893 + AT_rich Low_complexity Low_complexity 1 40 0 2207 100 0 16 chr17 79520292 79520603 -5917877 - AluSq SINE Alu -7 306 1 642 263 58 62 chr17 79520603 79520778 -5917702 - MIR SINE MIR -11 251 74 2261 67 3 10 chr17 79520778 79521078 -5917402 + AluSp SINE Alu 1 298 -15 642 263 58 62 chr17 79521078 79521150 -5917330 - MIR SINE MIR -188 74 3 2150 99 6 10 chr17 79521823 79522136 -5916344 + AluSx SINE Alu 1 312 0 210 216 0 0 chr17 79522138 79522175 -5916305 + (CCCA)n Simple_repeat Simple_repeat 3 39 0 506 306 60 27 chr17 79522490 79522673 -5915807 + MIR SINE MIR 48 236 -26 196 337 48 0 chr17 79523489 79523572 -5914908 + L2 LINE L2 2376 2462 -852 2200 109 0 0 chr17 79523740 79524042 -5914438 + AluSg SINE Alu 1 302 -8 387 60 0 0 chr17 79524042 79524092 -5914388 + (GA)n Simple_repeat Simple_repeat 1 50 0 846 185 0 0 chr17 79524116 79524262 -5914218 - AluJo/FRAM SINE Alu -7 305 160 1626 88 0 0 chr17 79524262 79524479 -5914001 - AluY SINE Alu -94 217 1 601 141 106 0 chr17 79524481 79524623 -5913857 - L1M4 LINE L1 -817 5329 5173 777 180 29 7 chr17 79524624 79524763 -5913717 - AluSq SINE Alu -158 155 14 320 127 0 113 chr17 79524763 79524834 -5913646 + FLAM_A SINE Alu 71 133 0 3666 190 45 52 chr17 79524946 79525283 -5913197 - L1ME1 LINE L1 -5 6161 5823 1755 141 3 28 chr17 79525283 79525603 -5912877 + AluJo SINE Alu 1 312 0 3666 190 45 52 chr17 79525603 79526109 -5912371 - L1ME1 LINE L1 -343 5823 5315 2095 109 0 0 chr17 79526109 79526402 -5912078 - AluY SINE Alu -18 293 1 3666 190 45 52 chr17 79526402 79526721 -5911759 - L1ME1 LINE L1 -851 5315 4998 1647 157 31 14 chr17 79526721 79527015 -5911465 - AluJo SINE Alu -13 299 1 4587 166 54 43 chr17 79527018 79528334 -5910146 - L1MB7 LINE L1 0 6184 4669 2436 54 0 3 chr17 79528382 79528680 -5909800 - AluY SINE Alu -14 297 1 1742 171 0 0 chr17 79528909 79529201 -5909279 + AluJo SINE Alu 1 292 -20 684 118 29 0 chr17 79529213 79529315 -5909165 + MLT2C1 LTR ERVL 104 208 -189 668 267 28 50 chr17 79529801 79530166 -5908314 + L1MC4a LINE L1 5646 6010 -281 348 247 0 0 chr17 79530818 79530891 -5907589 + MIR SINE MIR 72 144 -64 658 129 0 43 chr17 79530892 79530983 -5907497 + AluJo SINE Alu 40 127 -185 1968 119 0 16 chr17 79530983 79531286 -5907194 + AluSx SINE Alu 3 300 -12 658 129 0 43 chr17 79531286 79531310 -5907170 + AluJo SINE Alu 127 150 -162 25 31 0 0 chr17 79532360 79532392 -5906088 + AT_rich Low_complexity Low_complexity 1 32 0 51 94 0 0 chr17 79533439 79533588 -5904892 + GC_rich Low_complexity Low_complexity 1 149 0 23 0 0 0 chr17 79533642 79533665 -5904815 + GC_rich Low_complexity Low_complexity 1 23 0 185 164 0 18 chr17 79533856 79533911 -5904569 + G-rich Low_complexity Low_complexity 5 58 0 24 32 0 0 chr17 79533912 79533943 -5904537 + GC_rich Low_complexity Low_complexity 1 31 0 2000 87 56 0 chr17 79534784 79535072 -5903408 - AluSg SINE Alu -5 305 2 655 223 29 0 chr17 79535796 79535935 -5902545 - MIR SINE MIR -11 251 109 200 248 228 50 chr17 79535974 79536075 -5902405 + MIR SINE MIR 79 197 -65 2126 116 0 0 chr17 79536083 79536385 -5902095 - AluSx SINE Alu -10 302 1 1987 96 36 0 chr17 79537853 79538133 -5900347 + AluSc SINE Alu 1 290 -19 2237 86 0 3 chr17 79538451 79538753 -5899727 + AluSx SINE Alu 1 301 -11 854 157 0 27 chr17 79538780 79538927 -5899553 + AluJo SINE Alu 1 143 -169 2149 97 7 0 chr17 79538928 79539226 -5899254 + AluSg SINE Alu 1 300 -10 375 259 129 20 chr17 79539455 79539602 -5898878 - MIR3 SINE MIR -14 194 32 2179 95 7 0 chr17 79540338 79540633 -5897847 - AluSx SINE Alu -15 297 1 64 35 0 0 chr17 79540641 79540726 -5897754 + AT_rich Low_complexity Low_complexity 1 85 0 1961 131 0 16 chr17 79540730 79541042 -5897438 - AluSx SINE Alu -5 307 1 1825 140 0 56 chr17 79541359 79541681 -5896799 - AluJb SINE Alu -8 304 1 966 157 86 20 chr17 79541915 79542112 -5896368 + MER2 DNA MER2_type 1 210 -135 2143 129 0 0 chr17 79542116 79542427 -5896053 - AluSx SINE Alu -1 311 1 322 274 41 0 chr17 79542427 79542500 -5895980 + MER2 DNA MER2_type 269 344 -1 448 291 131 19 chr17 79542508 79542714 -5895766 + MIR SINE MIR 31 259 -3 2200 108 0 0 chr17 79542737 79543044 -5895436 + AluSx SINE Alu 1 307 -5 2195 74 0 11 chr17 79543090 79543396 -5895084 + AluY SINE Alu 1 303 0 1591 133 82 0 chr17 79543806 79544076 -5894404 - AluJb SINE Alu -20 292 1 231 69 0 0 chr17 79544171 79544200 -5894280 - MER63 DNA MER1_type -54 1006 978 341 247 129 0 chr17 79544210 79544303 -5894177 - MER63 DNA MER1_type -105 731 1 2099 109 0 0 chr17 79544387 79544692 -5893788 - AluSx SINE Alu 0 305 1 611 136 0 0 chr17 79544743 79544831 -5893649 - FRAM SINE Alu -47 129 42 445 142 57 94 chr17 79544831 79544937 -5893543 - MIR SINE MIR -73 189 88 202 278 0 0 chr17 79545824 79545878 -5892602 + CT-rich Low_complexity Low_complexity 2 55 0 1998 125 3 3 chr17 79546019 79546314 -5892166 - AluSq SINE Alu -18 295 1 1955 209 34 10 chr17 79546584 79546995 -5891485 + LTR22 LTR ERVK 85 505 -4 1472 118 9 0 chr17 79547014 79547225 -5891255 - AluSx SINE Alu -99 213 1 922 193 69 0 chr17 79547475 79547677 -5890803 + MER20 DNA MER1_type 4 219 0 2110 116 7 7 chr17 79547892 79548202 -5890278 - AluSx SINE Alu -2 310 1 448 291 131 19 chr17 79548284 79548490 -5889990 + MIR SINE MIR 31 259 -3 2200 108 0 0 chr17 79548513 79548820 -5889660 + AluSx SINE Alu 1 307 -5 2195 74 0 11 chr17 79548866 79549172 -5889308 + AluY SINE Alu 1 303 0 1591 133 82 0 chr17 79549582 79549852 -5888628 - AluJb SINE Alu -20 292 1 231 69 0 0 chr17 79549947 79549976 -5888504 - MER63 DNA MER1_type -54 1006 978 341 247 129 0 chr17 79549986 79550079 -5888401 - MER63 DNA MER1_type -331 731 1 2099 109 0 0 chr17 79550163 79550468 -5888012 - AluSx SINE Alu 0 305 1 611 136 0 0 chr17 79550519 79550607 -5887873 - FRAM SINE Alu -47 129 42 445 142 57 94 chr17 79550607 79550713 -5887767 - MIR SINE MIR -73 189 88 202 278 0 0 chr17 79551600 79551654 -5886826 + CT-rich Low_complexity Low_complexity 2 55 0 2007 125 3 3 chr17 79551795 79552091 -5886389 - AluSq SINE Alu -17 296 1 1919 178 9 6 chr17 79552302 79552545 -5885935 - MER7A DNA MER2_type -2692 346 102 2003 105 0 0 chr17 79552545 79552822 -5885658 + AluSx SINE Alu 33 309 -3 1919 178 9 6 chr17 79552822 79552921 -5885559 - MER7A DNA MER2_type -2936 102 5 22 0 0 0 chr17 79553058 79553080 -5885400 + AT_rich Low_complexity Low_complexity 1 22 0 801 148 7 52 chr17 79553561 79553716 -5884764 - AluJo SINE Alu -164 148 1 2020 136 0 0 chr17 79553801 79554103 -5884377 + AluSq SINE Alu 1 302 -11 1257 119 31 10 chr17 79554100 79554293 -5884187 - AluSg/x SINE Alu -31 281 85 914 153 25 0 chr17 79555191 79555348 -5883132 + AluJb SINE Alu 130 290 -22 1433 131 36 0 chr17 79555377 79555599 -5882881 - AluSg/x SINE Alu -14 296 67 1172 130 117 135 chr17 79555601 79555839 -5882641 - pTR5 LTR ERV1 -2044 394 29 231 226 0 0 chr17 79555839 79555892 -5882588 - LTR30 LTR ERV1 -126 596 544 6148 122 66 66 chr17 79555892 79557172 -5881308 - pTR5 LTR ERV1 -413 2025 747 763 196 6 75 chr17 79557172 79557345 -5881135 - AluJo SINE Alu -108 204 44 442 260 94 0 chr17 79557346 79557473 -5881007 - HAL1 LINE L1 -175 2332 2194 741 210 42 0 chr17 79557538 79557681 -5880799 + AluJb SINE Alu 148 296 -16 2299 94 13 0 chr17 79557961 79558268 -5880212 + AluSx SINE Alu 2 312 0 524 268 26 98 chr17 79558610 79558811 -5879669 + MIR SINE MIR 3 182 -80 843 176 0 0 chr17 79558811 79558942 -5879538 + FLAM_C SINE Alu 1 131 -2 524 268 26 98 chr17 79558942 79559005 -5879475 + MIR SINE MIR 182 248 -14 1315 158 114 22 chr17 79559119 79559392 -5879088 + AluJo SINE Alu 1 298 -14 1903 147 7 3 chr17 79559394 79559693 -5878787 + AluSx SINE Alu 1 300 -12 242 146 0 36 chr17 79560006 79560061 -5878419 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 2095 100 0 55 chr17 79560281 79560611 -5877869 - AluSx SINE Alu 0 312 1 317 233 144 55 chr17 79560892 79561038 -5877442 + MIR SINE MIR 103 261 -1 2065 77 0 0 chr17 79561239 79561498 -5876982 - AluY SINE Alu -17 294 36 1490 147 60 4 chr17 79562784 79563016 -5875464 + AluJo SINE Alu 1 245 -67 772 172 0 8 chr17 79563104 79563238 -5875242 - FLAM_C SINE Alu 0 143 11 471 213 153 7 chr17 79563546 79563696 -5874784 + L1ME3A LINE L1 5994 6165 -5 212 167 24 0 chr17 79564327 79564369 -5874111 + (CGG)n Simple_repeat Simple_repeat 2 44 0 202 183 56 28 chr17 79564403 79564474 -5874006 + (CCGCG)n Simple_repeat Simple_repeat 1 73 0 213 98 0 59 chr17 79564605 79564656 -5873824 + (CGGGGG)n Simple_repeat Simple_repeat 6 53 0 24 32 0 0 chr17 79564761 79564792 -5873688 + GC_rich Low_complexity Low_complexity 1 31 0 26 30 0 0 chr17 79564936 79564969 -5873511 + GC_rich Low_complexity Low_complexity 1 33 0 805 127 0 89 chr17 79566460 79566617 -5871863 - FLAM_C SINE Alu 0 143 1 2070 80 53 30 chr17 79566622 79566922 -5871558 - AluSp SINE Alu -6 307 1 330 245 71 10 chr17 79567173 79567271 -5871209 - MIR3 SINE MIR -23 185 82 2324 96 0 3 chr17 79567695 79567998 -5870482 - AluSx SINE Alu -10 302 1 330 253 77 82 chr17 79568441 79568623 -5869857 + MIR SINE MIR 2 182 -80 22 70 0 0 chr17 79569683 79569726 -5868754 + AT_rich Low_complexity Low_complexity 1 43 0 770 274 40 5 chr17 79573708 79573931 -5864549 + MIR SINE MIR 23 253 -9 252 204 20 171 chr17 79574182 79574334 -5864146 - MIR3 SINE MIR -50 158 30 200 220 60 0 chr17 79574549 79574599 -5863881 + MIR SINE MIR 111 163 -99 565 211 0 26 chr17 79576486 79576801 -5861679 + (CA)n Simple_repeat Simple_repeat 1 306 0 830 140 0 37 chr17 79580024 79580160 -5858320 + FLAM_C SINE Alu 1 131 -2 2270 92 3 0 chr17 79582556 79582848 -5855632 + AluSq SINE Alu 1 293 -20 2090 137 0 6 chr17 79582848 79583160 -5855320 + AluSx SINE Alu 1 311 -1 1010 156 0 60 chr17 79583305 79583500 -5854980 + L1MB7 LINE L1 5178 5354 -824 2270 97 3 3 chr17 79583500 79583809 -5854671 + AluSg SINE Alu 1 309 -1 1010 156 0 60 chr17 79583809 79583923 -5854557 + L1MB7 LINE L1 5354 5473 -705 2064 107 7 10 chr17 79583923 79584084 -5854396 - AluSx SINE Alu -15 297 136 2113 91 3 7 chr17 79584084 79584395 -5854085 - AluSg SINE Alu 0 310 1 2064 107 7 10 chr17 79584395 79584531 -5853949 - AluSx SINE Alu -176 136 1 1966 113 3 3 chr17 79584560 79584843 -5853637 + AluSq SINE Alu 31 313 0 2342 68 0 10 chr17 79584854 79585150 -5853330 + AluY SINE Alu 1 293 -18 2662 164 30 2 chr17 79585152 79585623 -5852857 + L1MB7 LINE L1 5686 6169 -15 1638 113 0 0 chr17 79585631 79585860 -5852620 + AluSq SINE Alu 76 304 -9 421 17 35 0 chr17 79585994 79586052 -5852428 + (CA)n Simple_repeat Simple_repeat 1 60 0 2200 96 3 6 chr17 79587064 79587376 -5851104 + AluSx SINE Alu 1 311 -1 2144 112 0 10 chr17 79587386 79587690 -5850790 + AluSx SINE Alu 1 301 -11 2523 71 0 0 chr17 79587786 79588097 -5850383 + AluY SINE Alu 1 311 0 2025 135 7 0 chr17 79588162 79588450 -5850030 - AluJo SINE Alu -22 290 1 2102 98 3 44 chr17 79588619 79588935 -5849545 + AluSp SINE Alu 1 303 -10 1682 161 10 20 chr17 79589350 79589648 -5848832 - AluJb SINE Alu -17 295 1 254 439 0 0 chr17 79590976 79591147 -5847333 + (CAGGC)n Simple_repeat Simple_repeat 5 175 0 * 344 402 0 0 chr17 79591135 79591337 -5847143 + (CAAAC)n Simple_repeat Simple_repeat 1 202 0 382 401 0 0 chr17 79591758 79591930 -5846550 + (CAGGC)n Simple_repeat Simple_repeat 4 175 0 1798 130 23 0 chr17 79593145 79593406 -5845074 + AluSq SINE Alu 40 306 -7 2254 114 0 0 chr17 79593494 79593792 -5844688 + AluSx SINE Alu 1 298 -14 1901 114 33 4 chr17 79593913 79594033 -5844447 + AluSc SINE Alu 1 116 -194 330 26 0 0 chr17 79594033 79594072 -5844408 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1901 114 33 4 chr17 79594072 79594253 -5844227 + AluSc SINE Alu 116 310 0 1912 130 45 3 chr17 79594336 79594628 -5843852 + AluSx SINE Alu 1 304 -8 2666 257 15 64 chr17 79594828 79594906 -5843574 + L1MEc LINE L1 37 117 -6279 2240 102 0 0 chr17 79594906 79595201 -5843279 + AluSg SINE Alu 1 295 -15 2666 257 15 64 chr17 79595201 79595470 -5843010 + L1MEc LINE L1 117 398 -5998 1990 136 30 0 chr17 79595470 79595765 -5842715 + AluSx SINE Alu 3 306 -6 2666 257 15 64 chr17 79595765 79596188 -5842292 + L1MEc LINE L1 398 755 -5641 2230 105 0 0 chr17 79596188 79596493 -5841987 + AluSx SINE Alu 1 305 -7 2666 257 15 64 chr17 79596493 79596676 -5841804 + L1MEc LINE L1 755 945 -5451 1387 173 38 48 chr17 79596696 79596834 -5841646 - AluJo SINE Alu -26 286 148 2030 113 30 7 chr17 79596834 79597135 -5841345 - AluSx SINE Alu -4 308 1 2405 47 17 3 chr17 79597145 79597442 -5841038 - AluY SINE Alu -10 301 1 1387 173 38 48 chr17 79597442 79597581 -5840899 - AluJo SINE Alu -173 139 1 2350 87 0 0 chr17 79597581 79597879 -5840601 - AluSx SINE Alu -14 298 1 2159 96 7 0 chr17 79598418 79598709 -5839771 + AluSx SINE Alu 1 293 -19 2261 64 0 20 chr17 79598796 79599093 -5839387 - AluSc SINE Alu -18 291 1 1523 151 42 35 chr17 79599610 79599733 -5838747 + AluJb SINE Alu 1 122 -190 2234 90 0 7 chr17 79599733 79600022 -5838458 + AluSx SINE Alu 1 287 -25 1523 151 42 35 chr17 79600022 79600183 -5838297 + AluJb SINE Alu 122 287 -25 1901 149 7 0 chr17 79600250 79600545 -5837935 + AluSx SINE Alu 1 297 -15 324 172 0 152 chr17 79600568 79600667 -5837813 + HsTC2 DNA Tc2 7 90 -1808 1185 118 0 0 chr17 79600667 79600836 -5837644 - AluSg/x SINE Alu -13 297 129 414 0 0 0 chr17 79600836 79600882 -5837598 + (TG)n Simple_repeat Simple_repeat 1 46 0 1984 108 11 0 chr17 79600882 79601160 -5837320 - AluSx SINE Alu -31 281 1 868 220 24 23 chr17 79601356 79601785 -5836695 + MLT1D LTR MaLR 1 504 -1 2083 120 0 3 chr17 79601847 79602147 -5836333 - AluSq SINE Alu -14 299 1 2452 52 0 10 chr17 79602552 79602857 -5835623 + AluY SINE Alu 1 302 -9 469 300 9 43 chr17 79602978 79603188 -5835292 + L1MC/D LINE L1 5414 5616 -2192 348 200 0 0 chr17 79603946 79604036 -5834444 + (CA)n Simple_repeat Simple_repeat 2 91 0 1895 157 3 10 chr17 79604115 79604421 -5834059 - AluJo SINE Alu 0 312 9 22 35 0 0 chr17 79604757 79604786 -5833694 + AT_rich Low_complexity Low_complexity 1 29 0 2114 124 3 10 chr17 79604851 79605165 -5833315 + AluSx SINE Alu 1 312 0 2107 89 4 4 chr17 79605578 79605859 -5832621 + AluSx SINE Alu 15 295 -17 21 0 0 0 chr17 79606976 79606997 -5831483 + GC_rich Low_complexity Low_complexity 1 21 0 807 189 0 7 chr17 79607705 79607853 -5830627 - AluSg/x SINE Alu -14 296 150 207 317 25 17 chr17 79607965 79608085 -5830395 + CT-rich Low_complexity Low_complexity 3 123 0 892 155 5 48 chr17 79608784 79608971 -5829509 - AluJb SINE Alu 0 312 134 189 0 0 0 chr17 79609323 79609344 -5829136 + (A)n Simple_repeat Simple_repeat 1 21 0 951 129 7 0 chr17 79609456 79609595 -5828885 + AluSq/x SINE Alu 6 145 -167 1623 170 37 37 chr17 79609596 79609732 -5828748 + AluSx SINE Alu 1 136 -166 1887 103 0 73 chr17 79609732 79609876 -5828604 + AluSg SINE Alu 1 113 -197 2439 49 0 20 chr17 79609876 79610181 -5828299 + AluY SINE Alu 1 299 -12 1887 103 0 73 chr17 79610181 79610338 -5828142 + AluSg SINE Alu 113 280 -30 339 25 0 0 chr17 79610343 79610383 -5828097 + (CA)n Simple_repeat Simple_repeat 1 40 0 1368 176 0 94 chr17 79610386 79610549 -5827931 + AluJb SINE Alu 1 119 -193 2195 90 7 0 chr17 79610549 79610838 -5827642 + AluSc SINE Alu 1 291 -18 1368 176 0 94 chr17 79610838 79611004 -5827476 + AluJb SINE Alu 119 299 -13 1623 170 37 37 chr17 79611004 79611157 -5827323 + AluSx SINE Alu 141 300 -2 2642 62 2 142 chr17 79611189 79611627 -5826853 + MER51B LTR ERV1 1 377 0 1720 185 67 17 chr17 79611703 79612059 -5826421 + MLT1A2 LTR MaLR 1 374 0 335 306 0 0 chr17 79612337 79612448 -5826032 + L1ME4a LINE L1 5724 5834 -287 897 183 89 0 chr17 79612448 79612617 -5825863 + FAM SINE Alu 1 48 -1 2080 92 3 3 chr17 79612623 79612905 -5825575 + AluSg SINE Alu 1 282 -28 219 88 0 0 chr17 79612905 79612939 -5825541 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 2067 123 3 16 chr17 79612939 79613255 -5825225 + AluSx SINE Alu 1 312 0 1966 134 7 0 chr17 79613272 79613562 -5824918 + AluSx SINE Alu 6 297 -15 552 159 131 0 chr17 79613728 79613835 -5824645 - FLAM_A SINE Alu -2 140 20 2080 97 3 7 chr17 79614114 79614427 -5824053 + AluSx SINE Alu 1 312 0 1136 112 12 0 chr17 79614427 79614588 -5823892 + AluSg/x SINE Alu 133 295 -15 1010 156 0 60 chr17 79614588 79614702 -5823778 - L1M4 LINE L1 -705 5473 5354 2270 97 3 3 chr17 79614702 79615011 -5823469 - AluSg SINE Alu -1 309 1 1010 156 0 60 chr17 79615011 79615206 -5823274 - L1M4 LINE L1 -824 5354 5178 2090 137 0 6 chr17 79615351 79615664 -5822816 - AluSx SINE Alu -1 311 1 2270 92 3 0 chr17 79615664 79615955 -5822525 - AluSq SINE Alu -20 293 1 830 140 0 37 chr17 79618348 79618484 -5819996 - FLAM_C SINE Alu -2 131 1 2490 49 0 10 chr17 79620164 79620470 -5818010 - AluY SINE Alu -6 305 3 339 226 0 123 chr17 79620471 79620505 -5817975 - FLAM_A SINE Alu -209 93 56 2198 92 9 22 chr17 79620505 79620820 -5817660 - AluY SINE Alu 0 311 1 339 226 0 123 chr17 79620820 79620891 -5817589 - FLAM_A SINE Alu -246 56 1 * 553 93 74 65 chr17 79620891 79620985 -5817495 - Tigger1 DNA MER2_type -327 2091 1994 2098 111 0 10 chr17 79620985 79621283 -5817197 - AluSq SINE Alu -18 295 1 553 93 74 65 chr17 79621283 79621294 -5817186 - Tigger1 DNA MER2_type -424 1994 1985 476 231 0 0 chr17 79621300 79621404 -5817076 - U13 snRNA snRNA 0 104 1 * 4182 141 209 118 chr17 79621400 79621440 -5817040 - Tigger1 DNA MER2_type -412 2006 1971 2186 95 17 0 chr17 79621440 79621736 -5816744 - AluSx SINE Alu -11 301 1 4182 141 209 118 chr17 79621736 79622242 -5816238 - Tigger1 DNA MER2_type -447 1971 1513 2141 124 0 0 chr17 79622242 79622540 -5815940 - AluSx SINE Alu -14 298 1 4182 141 209 118 chr17 79622540 79622607 -5815873 - Tigger1 DNA MER2_type -905 1513 1454 1684 154 0 32 chr17 79622607 79622892 -5815588 - AluJb SINE Alu -32 280 5 576 184 0 19 chr17 79622895 79622998 -5815482 - AluJo SINE Alu -168 144 44 4182 141 209 118 chr17 79622998 79623197 -5815283 - Tigger1 DNA MER2_type -965 1453 1274 2149 111 3 0 chr17 79623197 79623485 -5814995 - AluSx SINE Alu -23 289 1 4182 141 209 118 chr17 79623485 79624106 -5814374 - Tigger1 DNA MER2_type -1144 1274 711 1495 95 66 0 chr17 79624106 79624317 -5814163 - AluSg SINE Alu -77 233 9 4182 141 209 118 chr17 79624317 79624515 -5813965 - Tigger1 DNA MER2_type -1707 711 105 815 157 58 12 chr17 79624517 79624689 -5813791 + AluJb SINE Alu 1 180 -132 2230 95 3 0 chr17 79624899 79625193 -5813287 - AluSq SINE Alu -18 295 1 2424 73 0 6 chr17 79625613 79625928 -5812552 - AluSp SINE Alu 0 313 1 1713 123 0 15 chr17 79626007 79626267 -5812213 + AluSx SINE Alu 56 311 -1 2389 74 0 0 chr17 79626878 79627176 -5811304 + AluSg SINE Alu 5 302 -8 1393 162 48 57 chr17 79628375 79628709 -5809771 + MLT1D LTR MaLR 1 331 -174 644 49 24 0 chr17 79628755 79628837 -5809643 - AluSg/x SINE Alu -12 298 215 2045 77 4 0 chr17 79628837 79629096 -5809384 - AluSx SINE Alu -52 260 1 2132 105 0 7 chr17 79629098 79629392 -5809088 - AluSx SINE Alu -20 292 1 229 72 391 0 chr17 79629447 79629516 -5808964 + MLT1D LTR MaLR 409 504 -1 1831 159 0 19 chr17 79629827 79630135 -5808345 + AluJo SINE Alu 1 302 -10 835 197 67 5 chr17 79630251 79630459 -5808021 + MLT1C LTR MaLR 203 423 -44 1878 95 18 7 chr17 79630877 79631151 -5807329 + AluSx SINE Alu 35 311 -1 765 171 214 24 chr17 79631390 79631600 -5806880 - MER2 DNA MER2_type -95 250 1 2125 107 0 36 chr17 79631753 79632061 -5806419 - AluSx SINE Alu -15 297 1 1040 108 0 0 chr17 79632095 79632234 -5806246 - AluSq/x SINE Alu -174 139 1 1815 147 0 14 chr17 79632236 79632529 -5805951 - AluJo SINE Alu -18 294 6 24 32 0 0 chr17 79632534 79632565 -5805915 + AT_rich Low_complexity Low_complexity 1 31 0 964 161 132 85 chr17 79633846 79633923 -5804557 - MER47A DNA MER2_type -1966 357 285 2090 106 14 3 chr17 79633923 79634216 -5804264 + AluSx SINE Alu 1 296 -16 964 161 132 85 chr17 79634216 79634479 -5804001 - MER47A DNA MER2_type -2038 285 1 861 201 86 47 chr17 79635821 79635966 -5802514 - MER33 DNA MER1_type -2261 324 186 270 0 0 0 chr17 79635966 79635996 -5802484 + (TATG)n Simple_repeat Simple_repeat 2 31 0 2259 81 11 0 chr17 79635996 79636281 -5802199 - AluSp SINE Alu -25 288 1 861 201 86 47 chr17 79636281 79636311 -5802169 - MER33 DNA MER1_type -2399 186 159 731 179 41 0 chr17 79636311 79636434 -5802046 - FLAM_C SINE Alu -5 128 1 861 201 86 47 chr17 79636434 79636534 -5801946 - MER33 DNA MER1_type -2426 159 36 1672 88 0 9 chr17 79637467 79637694 -5800786 - AluSg/x SINE Alu 0 312 88 1964 113 7 0 chr17 79637697 79637971 -5800509 + AluSx SINE Alu 37 312 0 2037 110 55 0 chr17 79638847 79639137 -5799343 + AluSx SINE Alu 1 306 -6 1112 133 6 0 chr17 79639142 79639307 -5799173 + AluSg/x SINE Alu 136 301 -11 746 209 115 11 chr17 79639719 79639910 -5798570 - MER20 DNA MER1_type -2 217 7 2050 110 7 7 chr17 79639933 79640225 -5798255 + AluSg SINE Alu 1 292 -18 2386 86 0 0 chr17 79640700 79641003 -5797477 - AluSg SINE Alu -7 303 1 260 105 0 88 chr17 79641084 79641141 -5797339 + L1MC4 LINE L1 6750 6801 -1241 514 167 0 22 chr17 79641142 79641232 -5797248 + HY4 scRNA scRNA 2 89 -4 2061 88 49 0 chr17 79641233 79641518 -5796962 - AluSg SINE Alu -11 299 1 863 194 47 5 chr17 79641539 79641750 -5796730 + L1MC4 LINE L1 6788 7007 -1035 1740 163 40 0 chr17 79641753 79642053 -5796427 + AluSx SINE Alu 1 312 0 370 157 24 12 chr17 79642053 79642136 -5796344 + GA-rich Low_complexity Low_complexity 3 86 0 280 170 0 0 chr17 79642136 79642189 -5796291 + Tigger1 DNA MER2_type 1 53 -2365 1223 127 0 0 chr17 79642189 79642362 -5796118 - AluSg/x SINE Alu -11 299 127 1237 126 5 11 chr17 79642465 79642656 -5795824 - AluSg SINE Alu -120 190 1 1985 115 3 20 chr17 79642755 79643050 -5795430 + AluSx SINE Alu 15 304 -8 1851 111 61 37 chr17 79643498 79643795 -5794685 - AluSp SINE Alu -9 304 1 281 161 0 16 chr17 79644078 79644140 -5794340 - MER50 LTR ERV1 -178 556 496 207 267 0 0 chr17 79644876 79644921 -5793559 + GA-rich Low_complexity Low_complexity 1 45 0 24 53 0 0 chr17 79645525 79645563 -5792917 + GC_rich Low_complexity Low_complexity 1 38 0 2067 108 7 20 chr17 79650244 79650549 -5787931 + AluJb SINE Alu 1 301 -11 1664 121 4 0 chr17 79650651 79650883 -5787597 - AluSx SINE Alu -77 235 3 189 0 0 0 chr17 79651502 79651523 -5786957 + (A)n Simple_repeat Simple_repeat 1 21 0 439 153 0 0 chr17 79654300 79654372 -5784108 - AluJb SINE Alu -18 294 223 949 137 7 0 chr17 79654372 79654511 -5783969 - AluJb SINE Alu -128 184 45 1593 96 5 0 chr17 79654660 79654891 -5783589 + AluSg/x SINE Alu 84 315 0 312 120 0 0 chr17 79655063 79655113 -5783367 + (TTCA)n Simple_repeat Simple_repeat 1 50 0 884 200 0 0 chr17 79655114 79655264 -5783216 - AluJo SINE Alu -25 287 138 184 245 75 0 chr17 79656116 79656169 -5782311 - L2 LINE L2 -2 3311 3255 803 149 0 22 chr17 79656319 79656453 -5782027 - AluJo SINE Alu -169 133 3 2350 107 3 7 chr17 79656553 79656861 -5781619 - AluSq SINE Alu -4 309 3 1660 179 39 29 chr17 79656911 79657219 -5781261 + AluJo SINE Alu 1 311 -1 2123 108 31 0 chr17 79657371 79657658 -5780822 + AluSx SINE Alu 1 296 -16 6454 77 20 46 chr17 79657807 79659193 -5779287 + SVA Other Other 433 1426 0 180 0 0 0 chr17 79659269 79659289 -5779191 + (A)n Simple_repeat Simple_repeat 1 20 0 1247 129 0 0 chr17 79659764 79659942 -5778538 + AluSg/x SINE Alu 119 296 -14 2964 112 24 44 chr17 79659942 79660448 -5778032 + Tigger1 DNA MER2_type 1471 1967 -451 2389 90 7 0 chr17 79660448 79660748 -5777732 + AluSx SINE Alu 1 302 -10 2964 112 24 44 chr17 79660748 79660788 -5777692 + Tigger1 DNA MER2_type 1967 2006 -412 510 231 0 0 chr17 79660784 79660888 -5777592 + U13 snRNA snRNA 1 104 0 * 573 94 75 66 chr17 79660894 79660905 -5777575 + Tigger1 DNA MER2_type 1985 1994 -424 2213 98 7 17 chr17 79660905 79661201 -5777279 + AluSq SINE Alu 1 293 -20 573 94 75 66 chr17 79661201 79661295 -5777185 + Tigger1 DNA MER2_type 1994 2091 -327 464 201 0 132 chr17 79661295 79661366 -5777114 + FLAM_A SINE Alu 1 80 -231 2346 86 9 22 chr17 79661366 79661681 -5776799 + AluY SINE Alu 1 311 0 464 201 0 132 chr17 79661681 79661716 -5776764 + FLAM_A SINE Alu 80 82 -229 2614 55 0 10 chr17 79661716 79662024 -5776456 + AluY SINE Alu 3 307 -4 464 201 0 132 chr17 79662024 79662075 -5776405 + FLAM_A SINE Alu 82 138 -173 1680 145 68 34 chr17 79662075 79662185 -5776295 + Tigger1 DNA MER2_type 2084 2189 -229 2259 84 3 29 chr17 79662185 79662493 -5775987 - AluY SINE Alu -11 300 1 1680 145 68 34 chr17 79662493 79662706 -5775774 + Tigger1 DNA MER2_type 2189 2418 0 3475 186 136 23 chr17 79662706 79663634 -5774846 + L1MC4 LINE L1 7010 8042 0 2139 138 3 0 chr17 79663652 79663957 -5774523 + AluSx SINE Alu 1 306 -6 2325 108 0 0 chr17 79663959 79664265 -5774215 + AluSc SINE Alu 1 306 -3 1230 194 39 77 chr17 79664479 79664789 -5773691 + AluJo SINE Alu 1 298 -14 2219 113 0 52 chr17 79664895 79665222 -5773258 + AluSx SINE Alu 1 310 -2 2010 114 31 3 chr17 79665660 79665950 -5772530 - AluJo SINE Alu -14 298 1 2260 121 0 3 chr17 79666039 79666344 -5772136 + AluSx SINE Alu 1 304 -8 1126 185 79 76 chr17 79667936 79668277 -5770203 - MER2 DNA MER2_type 0 344 3 2042 38 8 4 chr17 79669479 79669717 -5768763 - AluY SINE Alu -12 299 61 949 175 0 0 chr17 79669717 79669860 -5768620 - AluSg/x SINE Alu -32 278 136 1742 152 33 0 chr17 79670406 79670676 -5767804 + AluSx SINE Alu 17 295 -17 2515 72 7 3 chr17 79670676 79670983 -5767497 + AluSp SINE Alu 1 308 -5 725 130 23 23 chr17 79671310 79671441 -5767039 - FLAM_C SINE Alu 0 133 3 851 48 0 0 chr17 79671541 79671645 -5766835 + U6 snRNA snRNA 1 104 -3 234 0 0 0 chr17 79671649 79671675 -5766805 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2046 112 13 30 chr17 79671826 79672130 -5766350 - AluSx SINE Alu -13 299 1 615 332 70 11 chr17 79672274 79672560 -5765920 + MARNA DNA Mariner 259 561 -25 2198 127 0 0 chr17 79672646 79672972 -5765508 + AluSx SINE Alu 1 326 0 2169 115 7 0 chr17 79672977 79673265 -5765215 + AluSq SINE Alu 1 290 -23 189 0 0 0 chr17 79673265 79673286 -5765194 + (TTAAA)n Simple_repeat Simple_repeat 3 23 0 2355 110 0 0 chr17 79673348 79673649 -5764831 + AluSx SINE Alu 1 301 -11 780 156 0 57 chr17 79674053 79674075 -5764405 - FLAM_C SINE Alu -169 133 111 1974 135 3 47 chr17 79674075 79674393 -5764087 + AluJb SINE Alu 1 304 -8 780 156 0 57 chr17 79674393 79674511 -5763969 - FLAM_C SINE Alu -191 111 1 2370 68 3 39 chr17 79674834 79675142 -5763338 + AluSp SINE Alu 1 297 -16 383 118 0 0 chr17 79675159 79675210 -5763270 + Charlie3 DNA MER1_type 2656 2706 -4 1981 171 0 13 chr17 79675451 79675767 -5762713 - AluJb SINE Alu 0 312 1 2554 52 0 0 chr17 79675883 79676173 -5762307 + AluY SINE Alu 1 290 -21 381 340 87 0 chr17 79676245 79676486 -5761994 + L1MC/D LINE L1 5531 5792 -2016 512 169 0 108 chr17 79676542 79676657 -5761823 + L1MC4 LINE L1 7481 7574 -468 2008 152 0 13 chr17 79676657 79676967 -5761513 + AluJb SINE Alu 1 306 -6 512 169 0 108 chr17 79676967 79677017 -5761463 + L1MC4 LINE L1 7574 7628 -414 2140 106 13 19 chr17 79677017 79677328 -5761152 + AluSx SINE Alu 1 309 -3 2066 127 7 0 chr17 79677781 79678065 -5760415 + AluSx SINE Alu 5 290 -22 1912 107 37 40 chr17 79678178 79678340 -5760140 - AluSg SINE Alu -13 297 135 2516 70 0 6 chr17 79678340 79678652 -5759828 - AluY SINE Alu -1 310 1 1912 107 37 40 chr17 79678652 79678787 -5759693 - AluSg SINE Alu -175 135 1 1430 166 73 47 chr17 79679042 79679177 -5759303 + AluJb SINE Alu 2 132 -180 2705 43 0 0 chr17 79679177 79679479 -5759001 + AluY SINE Alu 1 302 -9 1690 107 0 0 chr17 79679485 79679700 -5758780 + AluSg/x SINE Alu 78 292 -20 1430 166 73 47 chr17 79679700 79679858 -5758622 + AluJb SINE Alu 136 310 -2 898 130 8 0 chr17 79680971 79681102 -5757378 + AluSg/x SINE Alu 132 263 -47 182 250 96 0 chr17 79681108 79681160 -5757320 - L2 LINE L2 -2 3270 3214 2460 93 3 3 chr17 79681427 79681739 -5756741 + AluSx SINE Alu 1 312 0 595 321 58 38 chr17 79681744 79682139 -5756341 - L2 LINE L2 -442 2872 2470 862 130 0 0 chr17 79682262 79682377 -5756103 + FLAM_C SINE Alu 1 115 -28 279 0 0 0 chr17 79682383 79682414 -5756066 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2322 94 3 28 chr17 79682414 79682733 -5755747 + AluSx SINE Alu 1 311 -1 420 265 163 61 chr17 79683149 79683251 -5755229 + L1MC5 LINE L1 7492 7582 -379 2383 66 24 0 chr17 79683251 79683540 -5754940 + AluSp SINE Alu 1 296 -17 420 265 163 61 chr17 79683540 79683701 -5754779 + L1MC5 LINE L1 7582 7782 -179 2292 123 3 0 chr17 79683701 79684009 -5754471 + AluSq SINE Alu 1 309 -4 1921 134 45 7 chr17 79684025 79684317 -5754163 + AluSq SINE Alu 1 303 -10 1778 131 68 58 chr17 79684326 79684380 -5754100 + L1MB4 LINE L1 5779 5831 -349 2587 57 0 0 chr17 79684380 79684681 -5753799 + AluY SINE Alu 1 301 -10 1778 131 68 58 chr17 79684681 79684973 -5753507 + L1MB4 LINE L1 5831 6132 -48 2205 114 7 3 chr17 79684973 79685279 -5753201 + AluSp SINE Alu 1 307 -6 1778 131 68 58 chr17 79685279 79685312 -5753168 + L1MB4 LINE L1 6132 6163 -17 1657 122 105 44 chr17 79685338 79685457 -5753023 + AluSx SINE Alu 1 111 -201 2435 63 10 0 chr17 79685457 79685760 -5752720 + AluY SINE Alu 1 306 -5 1657 122 105 44 chr17 79685760 79685934 -5752546 + AluSx SINE Alu 111 312 0 2674 46 0 0 chr17 79686588 79686895 -5751585 + AluY SINE Alu 3 309 -2 342 242 88 41 chr17 79686995 79687125 -5751355 - MIR SINE MIR -44 164 31 25 0 0 0 chr17 79687714 79687739 -5750741 + GC_rich Low_complexity Low_complexity 1 25 0 1005 149 0 48 chr17 79688930 79689118 -5749362 - AluJb SINE Alu 0 312 134 189 0 0 0 chr17 79689471 79689492 -5748988 + (A)n Simple_repeat Simple_repeat 1 21 0 998 129 7 0 chr17 79689604 79689743 -5748737 + AluSq/x SINE Alu 6 145 -168 1494 170 37 37 chr17 79689744 79689880 -5748600 + AluSx SINE Alu 1 136 -166 1983 103 0 73 chr17 79689880 79690024 -5748456 + AluSg SINE Alu 1 113 -197 2563 49 0 20 chr17 79690024 79690329 -5748151 + AluY SINE Alu 1 299 -12 1983 103 0 73 chr17 79690329 79690486 -5747994 + AluSg SINE Alu 113 280 -30 321 26 0 0 chr17 79690491 79690529 -5747951 + (CA)n Simple_repeat Simple_repeat 1 38 0 1435 176 0 94 chr17 79690532 79690695 -5747785 + AluJb SINE Alu 1 119 -193 2301 90 7 0 chr17 79690695 79690984 -5747496 + AluSc SINE Alu 1 291 -18 1435 176 0 94 chr17 79690984 79691150 -5747330 + AluJb SINE Alu 119 299 -13 1494 170 37 37 chr17 79691150 79691303 -5747177 + AluSx SINE Alu 141 300 -2 2456 62 2 142 chr17 79691335 79691773 -5746707 + MER51B LTR ERV1 1 377 0 1520 188 67 17 chr17 79691849 79692205 -5746275 + MLT1A2 LTR MaLR 1 374 0 346 306 0 0 chr17 79692483 79692594 -5745886 + L1ME4a LINE L1 5724 5834 -287 904 182 88 6 chr17 79692594 79692764 -5745716 + FAM SINE Alu 1 48 -1 2178 92 3 3 chr17 79692770 79693052 -5745428 + AluSg SINE Alu 1 282 -28 219 88 0 0 chr17 79693052 79693086 -5745394 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 2176 123 3 16 chr17 79693086 79693402 -5745078 + AluSx SINE Alu 1 312 0 2053 134 7 0 chr17 79693419 79693709 -5744771 + AluSx SINE Alu 6 297 -15 500 157 128 0 chr17 79693875 79693977 -5744503 - FLAM_A SINE Alu -2 140 26 2214 113 0 0 chr17 79694261 79694554 -5743926 + AluSx SINE Alu 1 293 -19 2457 145 7 30 chr17 79694557 79694992 -5743488 - MER65A LTR ERV1 -20 425 1 2700 51 0 0 chr17 79695022 79695333 -5743147 - AluY SINE Alu 0 311 1 2369 88 0 7 chr17 79695335 79695631 -5742849 - AluSg SINE Alu -16 294 1 2142 125 3 10 chr17 79696835 79697146 -5741334 + AluSq SINE Alu 1 309 -4 1676 133 4 0 chr17 79697146 79697380 -5741100 + AluJb SINE Alu 1 235 -77 180 0 0 0 chr17 79697393 79697413 -5741067 + (A)n Simple_repeat Simple_repeat 1 20 0 2170 84 61 66 chr17 79697424 79697684 -5740796 + MER51B LTR ERV1 1 260 -117 1942 107 86 24 chr17 79697684 79697835 -5740645 - AluSx SINE Alu -3 309 169 2157 123 3 7 chr17 79697835 79698137 -5740343 - AluSg SINE Alu -9 301 1 1942 107 86 24 chr17 79698137 79698276 -5740204 - AluSx SINE Alu -143 169 1 2170 84 61 66 chr17 79698276 79698394 -5740086 + MER51B LTR ERV1 260 377 0 1901 90 90 21 chr17 79698416 79698695 -5739785 - AluSq SINE Alu -15 298 1 2473 122 48 21 chr17 79698695 79699121 -5739359 + MER4D LTR ERV1 302 742 -130 2203 102 24 3 chr17 79699125 79699420 -5739060 + AluSx SINE Alu 1 301 -11 361 244 8 59 chr17 79699674 79699793 -5738687 + MER77 LTR ERV1 66 178 -427 256 163 0 0 chr17 79699860 79699903 -5738577 + FRAM SINE Alu 72 114 -52 1040 169 21 78 chr17 79699903 79700145 -5738335 + AluJo SINE Alu 85 312 0 761 262 89 72 chr17 79700147 79700673 -5737807 + MER21B LTR ERV1 171 705 -158 2294 96 7 0 chr17 79700768 79701061 -5737419 - AluSq SINE Alu -18 295 1 472 111 0 0 chr17 79701087 79701150 -5737330 - AluS SINE Alu -238 75 13 2388 97 0 0 chr17 79701170 79701469 -5737011 - AluSx SINE Alu -13 299 1 582 108 11 0 chr17 79701695 79701788 -5736692 - AluSx SINE Alu -6 306 213 494 188 17 17 chr17 79701930 79702047 -5736433 - AluSp SINE Alu -194 119 3 582 108 11 0 chr17 79702279 79702372 -5736108 - AluSx SINE Alu -6 304 211 2238 185 60 10 chr17 79702372 79702385 -5736095 + LTR22 LTR ERVK 1 505 -4 2271 186 62 11 chr17 79702385 79702853 -5735627 + LTR22 LTR ERVK 14 505 -4 1683 113 0 0 chr17 79702872 79703085 -5735395 - AluSx SINE Alu -99 213 1 984 193 69 0 chr17 79703335 79703537 -5734943 + MER20 DNA MER1_type 4 219 0 2194 100 7 7 chr17 79703752 79704061 -5734419 - AluSx SINE Alu -2 310 2 816 204 6 6 chr17 79704326 79704483 -5733997 + FRAM SINE Alu 1 151 -25 670 264 200 55 chr17 79704486 79704926 -5733554 + MLT1H1 LTR MaLR 52 555 0 2150 125 0 0 chr17 79705781 79706086 -5732394 - AluSq SINE Alu -8 305 1 359 261 140 32 chr17 79706188 79706251 -5732229 + MER5B DNA MER1_type 1 56 -122 1706 170 26 22 chr17 79706251 79706562 -5731918 + AluJb SINE Alu 1 312 0 359 261 140 32 chr17 79706562 79706655 -5731825 + MER5B DNA MER1_type 56 174 -4 729 101 0 0 chr17 79706808 79706907 -5731573 + AluSc SINE Alu 136 234 -75 30 27 0 0 chr17 79706926 79706963 -5731517 + AT_rich Low_complexity Low_complexity 1 37 0 3127 171 41 11 chr17 79706964 79707527 -5730953 - L1MB5 LINE L1 -10 6164 5585 2250 100 0 0 chr17 79707776 79708077 -5730403 - AluSx SINE Alu -11 301 1 417 311 126 15 chr17 79708100 79708306 -5730174 - MIR SINE MIR -3 259 31 312 274 41 0 chr17 79708314 79708387 -5730093 - MER2 DNA MER2_type -1 344 269 2170 129 0 0 chr17 79708387 79708698 -5729782 + AluSx SINE Alu 1 311 -1 866 166 85 30 chr17 79708702 79708901 -5729579 - MER2 DNA MER2_type -135 210 1 1858 140 0 56 chr17 79709135 79709457 -5729023 + AluJb SINE Alu 1 304 -8 334 188 14 14 chr17 79709768 79709837 -5728643 + AluSg/x SINE Alu 213 281 -19 1727 159 7 36 chr17 79709862 79710139 -5728341 + AluJo SINE Alu 1 270 -42 1807 100 107 4 chr17 79710139 79710419 -5728061 - AluSg1 SINE Alu 0 309 1 1727 159 7 36 chr17 79710419 79710450 -5728030 + AluJo SINE Alu 270 300 -12 2222 95 0 3 chr17 79711767 79712063 -5726417 - AluSx SINE Alu -17 295 1 2123 76 3 40 chr17 79712076 79712379 -5726101 - AluY SINE Alu -19 292 1 241 242 100 42 chr17 79718331 79718451 -5720029 - Charlie7 DNA MER1_type -48 2564 2438 2311 74 17 0 chr17 79718485 79718783 -5719697 + AluSx SINE Alu 2 304 -8 3566 242 106 52 chr17 79719983 79720145 -5718335 + L1MC4 LINE L1 6463 6615 -1427 1730 177 3 10 chr17 79720145 79720456 -5718024 - AluJb SINE Alu 0 312 4 3566 242 106 52 chr17 79720456 79721791 -5716689 + L1MC4 LINE L1 6615 8040 -2 278 308 19 0 chr17 79722539 79722646 -5715834 - L1ME3A LINE L1 -17 6153 6045 2353 92 0 0 chr17 79723575 79723881 -5714599 - AluSg SINE Alu -2 308 3 716 284 71 0 chr17 79725175 79725386 -5713094 - MIR SINE MIR -22 240 15 2379 54 3 0 chr17 79725854 79726150 -5712330 - AluY SINE Alu -14 297 1 2173 96 3 0 chr17 79726284 79726575 -5711905 - AluSg SINE Alu -17 293 2 314 301 82 20 chr17 79726767 79726913 -5711567 - L2 LINE L2 -169 3144 2990 248 322 153 29 chr17 79727012 79727174 -5711306 - L2 LINE L2 -510 2804 2601 953 222 58 0 chr17 79727174 79727381 -5711099 + MER20 DNA MER1_type 1 219 0 248 322 153 29 chr17 79727381 79727460 -5711020 - L2 LINE L2 -713 2601 2533 1260 158 138 4 chr17 79727941 79728187 -5710293 - AluJo SINE Alu -33 279 1 2080 114 10 0 chr17 79728567 79728864 -5709616 - AluJb SINE Alu -12 300 1 2092 90 0 28 chr17 79729609 79729927 -5708553 + AluSg SINE Alu 1 310 0 358 301 17 81 chr17 79730257 79730493 -5707987 - MER112 DNA MER1_type -11 249 29 269 331 73 16 chr17 79732148 79732272 -5706208 - MIR SINE MIR -50 212 82 1917 117 4 0 chr17 79732400 79732673 -5705807 + AluSx SINE Alu 1 274 -38 306 0 0 0 chr17 79732673 79732707 -5705773 + (TG)n Simple_repeat Simple_repeat 1 34 0 339 360 0 0 chr17 79732712 79732801 -5705679 + L1MC4 LINE L1 6614 6702 -1340 * 347 337 0 0 chr17 79732748 79732837 -5705643 - L1MC4 LINE L1 -1339 6703 6615 233 284 0 63 chr17 79732842 79732937 -5705543 + L1MC4 LINE L1 6614 6702 -1340 233 337 0 0 chr17 79732915 79733004 -5705476 - L1MC4 LINE L1 -1340 6702 6614 318 333 0 0 chr17 79733066 79733147 -5705333 + L1MC4 LINE L1 6615 6695 -1347 439 229 214 0 chr17 79733147 79733278 -5705202 + MER5A DNA MER1_type 12 170 -19 268 309 55 9 chr17 79733899 79734009 -5704471 + MIR3 SINE MIR 69 183 -25 2522 43 0 0 chr17 79735447 79735746 -5702734 - AluY SINE Alu -12 299 1 1552 183 17 17 chr17 79735886 79736186 -5702294 + AluJb SINE Alu 8 307 -5 197 176 0 0 chr17 79737685 79737719 -5700761 + L2 LINE L2 124 157 -3157 2274 86 10 0 chr17 79738240 79738543 -5699937 - AluSp SINE Alu -7 306 1 283 155 69 0 chr17 79738544 79738602 -5699878 - MER105 DNA DNA -55 149 88 459 171 135 0 chr17 79739549 79739660 -5698820 + L2 LINE L2 3010 3135 -178 989 177 0 6 chr17 79740111 79740286 -5698194 + FRAM SINE Alu 1 174 -2 2042 110 0 0 chr17 79740290 79740613 -5697867 + AluY SINE Alu 1 323 0 2428 54 0 22 chr17 79740772 79741086 -5697394 - AluY SINE Alu -4 307 1 2131 110 3 3 chr17 79741086 79741387 -5697093 - AluSq SINE Alu -12 301 1 290 133 96 24 chr17 79741387 79741470 -5697010 + Charlie5 DNA MER1_type 2446 2534 -78 595 158 4 3 chr17 79741471 79741694 -5696786 + AluJo SINE Alu 1 280 -32 2423 60 0 22 chr17 79741731 79742047 -5696433 - AluY SINE Alu 0 311 3 276 77 0 0 chr17 79742104 79742143 -5696337 + (A)n Simple_repeat Simple_repeat 1 39 0 648 255 97 12 chr17 79742211 79742470 -5696010 - HAL1 LINE L1 -2 2505 2225 523 253 188 31 chr17 79742703 79742904 -5695576 - HAL1 LINE L1 -643 1864 1696 1859 138 11 4 chr17 79742904 79743179 -5695301 - AluJb SINE Alu -35 277 1 523 253 188 31 chr17 79743179 79743269 -5695211 - HAL1 LINE L1 -811 1696 1527 300 343 150 26 chr17 79743278 79743511 -5694969 - L1MDa LINE L1 -3962 2578 2317 255 358 53 10 chr17 79743807 79744014 -5694466 - HAL1 LINE L1 -865 1642 1427 536 292 138 59 chr17 79744026 79744777 -5693703 - L1MDa LINE L1 -5014 1516 706 251 244 22 22 chr17 79744923 79745013 -5693467 - L1MDa LINE L1 -6028 502 413 520 219 259 4 chr17 79745014 79745261 -5693219 - HAL1 LINE L1 -965 1542 1233 658 284 67 4 chr17 79745324 79745578 -5692902 - HAL1 LINE L1 -1430 1077 808 553 227 211 45 chr17 79745559 79745781 -5692699 + L1MD2 LINE L1 6029 6295 -64 * 2432 54 0 3 chr17 79745781 79746077 -5692403 - AluSg SINE Alu -13 297 3 553 227 211 45 chr17 79746077 79746096 -5692384 + L1MD2 LINE L1 6295 6310 -49 1162 197 40 54 chr17 79746234 79746668 -5691812 - L1MDb LINE L1 -4923 1617 1160 780 242 21 5 chr17 79746895 79747081 -5691399 + MER5A DNA MER1_type 1 189 0 982 326 25 11 chr17 79747434 79747867 -5690613 + Harlequin LTR ERV1 5072 5510 -2275 297 167 33 0 chr17 79747874 79747934 -5690546 - Alu SINE Alu 0 308 247 449 331 0 0 chr17 79748086 79748231 -5690249 + Harlequin LTR ERV1 2751 2895 -4001 301 345 0 0 chr17 79748453 79748572 -5689908 + Harlequin LTR ERV1 3034 3152 -3744 1974 118 3 23 chr17 79748911 79749217 -5689263 - AluSx SINE Alu -7 305 6 2159 87 7 7 chr17 79749309 79749607 -5688873 + AluSg SINE Alu 1 298 -12 2015 117 45 0 chr17 79749617 79749908 -5688572 + AluSg SINE Alu 1 304 -6 2006 96 36 0 chr17 79750558 79750838 -5687642 + AluSc SINE Alu 1 290 -19 2258 86 0 3 chr17 79751156 79751458 -5687022 + AluSx SINE Alu 1 301 -11 872 157 0 27 chr17 79751485 79751632 -5686848 + AluJo SINE Alu 1 143 -169 2177 97 7 0 chr17 79751633 79751931 -5686549 + AluSg SINE Alu 1 300 -10 365 272 122 14 chr17 79752160 79752307 -5686173 - MIR3 SINE MIR -14 194 32 2030 125 7 0 chr17 79753038 79753334 -5685146 - AluSx SINE Alu -10 302 5 2077 103 10 19 chr17 79753787 79754099 -5684381 - AluSx SINE Alu -3 309 1 514 169 0 108 chr17 79754099 79754149 -5684331 - L1MC4 LINE L1 -414 7628 7574 1881 152 0 13 chr17 79754149 79754459 -5684021 - AluJb SINE Alu -6 306 1 514 169 0 108 chr17 79754459 79754574 -5683906 - L1MC4 LINE L1 -468 7574 7481 411 347 92 0 chr17 79754609 79754871 -5683609 - L1MC/D LINE L1 -1992 5816 5531 2409 55 0 0 chr17 79754941 79755233 -5683247 - AluY SINE Alu -19 292 1 1825 173 0 13 chr17 79755349 79755661 -5682819 + AluJb SINE Alu 1 308 -4 1973 150 0 10 chr17 79756076 79756390 -5682090 + AluSx SINE Alu 1 311 -1 667 272 106 45 chr17 79756789 79757146 -5681334 - HAL1 LINE L1 -2127 380 2 1940 109 37 14 chr17 79758046 79758340 -5680140 + AluSx SINE Alu 1 301 -11 600 206 59 15 chr17 79758478 79758614 -5679866 + FLAM_C SINE Alu 2 143 0 4542 155 23 28 chr17 79759545 79760433 -5678047 + L1MB7 LINE L1 5292 6179 -5 625 136 107 0 chr17 79760451 79760554 -5677926 + AluSg/x SINE Alu 193 306 -4 873 141 0 61 chr17 79760576 79760739 -5677741 + AluJo SINE Alu 21 173 -139 247 289 132 0 chr17 79760955 79761031 -5677449 + MIR3 SINE MIR 109 194 -14 180 0 0 0 chr17 79761591 79761611 -5676869 + (T)n Simple_repeat Simple_repeat 1 20 0 474 18 0 0 chr17 79762218 79762273 -5676207 + (CA)n Simple_repeat Simple_repeat 2 56 0 2055 94 7 10 chr17 79762781 79763066 -5675414 + AluSq SINE Alu 1 286 -27 201 39 0 0 chr17 79763066 79763092 -5675388 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2055 94 7 10 chr17 79763092 79763103 -5675377 + AluSq SINE Alu 286 296 -17 231 196 10 113 chr17 79763114 79763211 -5675269 + L1ME4a LINE L1 5984 6070 -51 1607 129 60 66 chr17 79763680 79763982 -5674498 + AluSq SINE Alu 1 300 -13 2483 64 0 0 chr17 79763985 79764296 -5674184 + AluY SINE Alu 1 311 0 830 136 105 75 chr17 79764308 79764405 -5674075 + L1MD3 LINE L1 7731 7824 -171 711 186 0 31 chr17 79764405 79764534 -5673946 - FLAM_A SINE Alu -8 125 1 830 136 105 75 chr17 79764534 79764664 -5673816 + L1MD3 LINE L1 7824 7965 -30 1104 113 17 0 chr17 79765007 79765184 -5673296 + L1MB3 LINE L1 6003 6182 -1 1175 180 67 17 chr17 79766166 79766405 -5672075 + Charlie1 DNA MER1_type 1 251 -2510 369 193 43 114 chr17 79766375 79766515 -5671965 + Charlie1 DNA MER1_type 2632 2761 0 * 192 288 72 50 chr17 79766523 79766662 -5671818 + L2 LINE L2 2919 3060 -212 375 276 195 0 chr17 79766789 79766963 -5671517 - L2 LINE L2 -6 3307 3100 415 174 121 8 chr17 79767027 79767132 -5671348 + Charlie5 DNA MER1_type 2381 2505 -80 1765 176 0 13 chr17 79767132 79767444 -5671036 - AluJb SINE Alu -4 308 1 415 174 121 8 chr17 79767444 79767470 -5671010 + Charlie5 DNA MER1_type 2505 2527 -58 1074 227 37 5 chr17 79767506 79767722 -5670758 + MER58A DNA MER1_type 1 223 -1 382 256 133 47 chr17 79767793 79768004 -5670476 + MIR SINE MIR 9 237 -25 312 229 43 0 chr17 79768417 79768487 -5669993 + MER5A DNA MER1_type 10 82 -107 229 157 157 71 chr17 79769102 79769172 -5669308 - MER94 DNA DNA -53 81 6 342 259 71 92 chr17 79769817 79770056 -5668424 + L1MC4 LINE L1 7809 8042 0 2191 102 0 0 chr17 79770112 79770405 -5668075 - AluSx SINE Alu -19 293 1 2085 106 0 0 chr17 79770755 79771071 -5667409 + AluSx SINE Alu 1 316 0 1388 156 62 16 chr17 79771083 79771340 -5667140 + AluJb SINE Alu 1 269 -43 234 261 0 0 chr17 79773256 79773325 -5665155 + A-rich Low_complexity Low_complexity 1 69 0 729 186 102 0 chr17 79774082 79774249 -5664231 + MIR SINE MIR 53 236 -26 277 257 152 29 chr17 79774808 79774913 -5663567 - MIR SINE MIR -60 148 31 1855 161 0 0 chr17 79776109 79776400 -5662080 + AluSx SINE Alu 1 291 -21 2305 81 0 3 chr17 79776453 79776762 -5661718 + AluSp SINE Alu 1 308 -5 536 136 23 106 chr17 79776782 79776914 -5661566 + FLAM_A SINE Alu 22 142 0 2261 91 7 0 chr17 79777429 79777736 -5660744 - AluSp SINE Alu -4 309 1 216 0 0 0 chr17 79778596 79778620 -5659860 + (TG)n Simple_repeat Simple_repeat 2 25 0 32 57 0 0 chr17 79779487 79779540 -5658940 + GC_rich Low_complexity Low_complexity 1 53 0 244 195 0 23 chr17 79779855 79779942 -5658538 + (CTGGGG)n Simple_repeat Simple_repeat 1 85 0 183 80 0 0 chr17 79779980 79780005 -5658475 + (CGG)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr17 79780030 79780051 -5658429 + GC_rich Low_complexity Low_complexity 1 21 0 348 304 34 20 chr17 79780312 79780460 -5658020 - L2 LINE L2 -10 3303 3154 500 239 167 56 chr17 79780693 79780927 -5657553 + MIR SINE MIR 3 262 0 2131 97 0 34 chr17 79781012 79781332 -5657148 + AluSc SINE Alu 1 309 0 2129 115 0 26 chr17 79781350 79781662 -5656818 + AluSx SINE Alu 1 304 -8 2136 103 0 0 chr17 79781662 79781952 -5656528 + AluSx SINE Alu 1 290 -22 301 98 0 0 chr17 79781961 79782002 -5656478 + AluSx SINE Alu 1 41 -267 1788 146 4 0 chr17 79782006 79782280 -5656200 + AluSx SINE Alu 20 294 -18 2049 139 3 0 chr17 79782549 79782858 -5655622 + AluSx SINE Alu 1 310 -2 2268 95 3 0 chr17 79782867 79783172 -5655308 + AluSp SINE Alu 1 306 -7 338 330 92 12 chr17 79783546 79783719 -5654761 - MIR SINE MIR -2 260 74 2083 107 3 0 chr17 79783868 79784157 -5654323 - AluSx SINE Alu -20 292 3 286 246 0 0 chr17 79784335 79784404 -5654076 - MIR SINE MIR 0 262 194 293 271 76 8 chr17 79784441 79784559 -5653921 + L2 LINE L2 3167 3292 -21 2043 111 14 0 chr17 79784584 79784872 -5653608 + AluSx SINE Alu 10 301 -11 206 364 48 37 chr17 79786121 79786308 -5652172 + L2 LINE L2 2284 2472 -842 720 240 43 19 chr17 79786424 79786632 -5651848 + MIR SINE MIR 9 221 -41 2124 118 0 9 chr17 79786954 79787269 -5651211 - AluSx SINE Alu 0 312 1 821 131 0 83 chr17 79787273 79787418 -5651062 - FLAM_C SINE Alu 0 133 1 408 169 0 12 chr17 79787418 79787496 -5650984 + Charlie5 DNA MER1_type 2504 2580 -32 2342 99 0 0 chr17 79787700 79788012 -5650468 + AluSx SINE Alu 1 312 0 1497 114 23 0 chr17 79788232 79788452 -5650028 + AluSg/x SINE Alu 87 311 -1 204 40 0 0 chr17 79788466 79788491 -5649989 + (CAAT)n Simple_repeat Simple_repeat 2 26 0 496 315 139 13 chr17 79788497 79788799 -5649681 + HERV16 LTR ERVL 211 550 -4446 1000 224 95 15 chr17 79788893 79789157 -5649323 + HERV16 LTR ERVL 745 1029 -3967 386 315 76 16 chr17 79789307 79789491 -5648989 + LTR16A LTR ERVL 244 438 -12 2131 123 0 0 chr17 79790123 79790425 -5648055 - AluSx SINE Alu -10 302 1 2131 113 0 7 chr17 79790878 79791180 -5647300 + AluSx SINE Alu 3 302 -10 368 133 3 0 chr17 79791468 79791534 -5646946 - Alu SINE Alu -249 53 1 281 169 31 31 chr17 79791534 79791586 -5646894 + MLT1C LTR MaLR 416 467 0 2264 88 0 7 chr17 79791618 79791915 -5646565 - AluSq SINE Alu -18 295 1 1930 127 27 3 chr17 79792163 79792455 -5646025 - AluJo SINE Alu -13 299 1 867 161 49 0 chr17 79792671 79792833 -5645647 - AluJb SINE Alu -7 305 136 428 259 139 42 chr17 79793447 79793613 -5644867 + MIR SINE MIR 60 241 -21 39 0 0 0 chr17 79794009 79794048 -5644432 + AT_rich Low_complexity Low_complexity 1 39 0 190 286 32 16 chr17 79794167 79794230 -5644250 - MIR SINE MIR -124 84 21 260 256 152 24 chr17 79799044 79799169 -5639311 - L2 LINE L2 -3 3310 3170 256 287 161 35 chr17 79801994 79802248 -5636232 + L2 LINE L2 2564 2849 -465 2087 110 13 10 chr17 79802390 79802700 -5635780 - AluSx SINE Alu -1 311 1 2405 79 0 6 chr17 79802711 79803026 -5635454 - AluSq SINE Alu 0 313 1 815 151 0 0 chr17 79803158 79803277 -5635203 - FLAM_C SINE Alu -24 119 1 191 217 43 0 chr17 79803348 79803394 -5635086 + L2 LINE L2 3263 3310 -3 487 336 29 29 chr17 79804977 79805254 -5633226 + L2 LINE L2 2811 3087 -185 330 67 0 0 chr17 79806812 79806826 -5631654 + (TG)n Simple_repeat Simple_repeat 1 59 0 330 67 0 0 chr17 79806826 79806871 -5631609 + (TG)n Simple_repeat Simple_repeat 2 46 0 2332 95 0 13 chr17 79806890 79807205 -5631275 - AluSx SINE Alu -1 311 1 1741 169 0 7 chr17 79807215 79807505 -5630975 - AluJo SINE Alu -24 288 1 2217 78 10 3 chr17 79808491 79808771 -5629709 + AluSc SINE Alu 1 285 -24 459 0 0 0 chr17 79808771 79808822 -5629658 + (CA)n Simple_repeat Simple_repeat 2 52 0 2217 78 10 3 chr17 79808822 79808836 -5629644 + AluSc SINE Alu 285 297 -12 339 133 0 0 chr17 79809030 79809090 -5629390 + AluS SINE Alu 1 60 -240 762 175 7 14 chr17 79809138 79809281 -5629199 - FLAM_C SINE Alu -1 142 1 2202 98 7 0 chr17 79809311 79809606 -5628874 + AluSx SINE Alu 1 297 -15 1458 168 4 0 chr17 79809706 79809938 -5628542 + AluSx SINE Alu 1 233 -79 588 161 0 0 chr17 79809939 79810032 -5628448 - AluSg/x SINE Alu -83 229 137 2198 105 3 3 chr17 79810098 79810404 -5628076 - AluSx SINE Alu -6 306 1 2467 71 0 3 chr17 79810799 79811110 -5627370 + AluSp SINE Alu 1 310 -3 321 312 164 28 chr17 79811299 79811623 -5626857 + L2 LINE L2 2550 2917 -397 253 349 37 0 chr17 79811700 79811809 -5626671 + MIR SINE MIR 91 203 -59 2031 97 0 45 chr17 79811811 79811945 -5626535 + AluSx SINE Alu 3 142 -170 2400 74 0 10 chr17 79811945 79812255 -5626225 + AluSp SINE Alu 1 307 -6 2031 97 0 45 chr17 79812255 79812430 -5626050 + AluSx SINE Alu 142 298 -14 1425 223 22 84 chr17 79812459 79812898 -5625582 + L1MB8 LINE L1 5668 6133 -45 351 0 0 0 chr17 79812898 79812937 -5625543 + (CA)n Simple_repeat Simple_repeat 2 40 0 1948 117 25 11 chr17 79812942 79813225 -5625255 - AluSx SINE Alu -25 287 1 1425 223 22 84 chr17 79813225 79813251 -5625229 + L1MB8 LINE L1 6137 6106 -72 1960 140 3 10 chr17 79813251 79813559 -5624921 + AluJb SINE Alu 1 306 -6 1425 223 22 84 chr17 79813559 79813620 -5624860 + L1MB8 LINE L1 6105 6168 -10 2099 98 30 3 chr17 79813774 79814071 -5624409 - AluSp SINE Alu -7 306 2 2303 84 0 7 chr17 79814074 79814372 -5624108 - AluSx SINE Alu -16 296 1 296 233 122 11 chr17 79814775 79814865 -5623615 + MIR SINE MIR 98 197 -65 2189 118 0 0 chr17 79815039 79815336 -5623144 + AluSx SINE Alu 1 297 -15 2024 94 0 28 chr17 79815349 79815488 -5622992 + AluSg SINE Alu 1 142 -162 2179 116 0 3 chr17 79815488 79815799 -5622681 + AluSg SINE Alu 1 310 0 2024 94 0 28 chr17 79815799 79815971 -5622509 + AluSg SINE Alu 142 304 0 233 218 0 0 chr17 79816088 79816143 -5622337 - L1MB5 LINE L1 -15 6159 6105 2419 61 0 0 chr17 79816147 79816444 -5622036 - AluY SINE Alu -14 297 1 504 309 101 10 chr17 79816531 79816738 -5621742 - MIR SINE MIR -18 244 19 2346 93 0 0 chr17 79821291 79821601 -5616879 + AluSx SINE Alu 1 310 -2 361 242 84 0 chr17 79822225 79822320 -5616160 + MIR SINE MIR 41 143 -65 191 224 20 0 chr17 79822419 79822468 -5616012 - MIR SINE MIR -144 118 69 256 306 155 20 chr17 79822836 79823058 -5615422 + MIR SINE MIR 12 262 0 478 231 123 15 chr17 79823125 79823255 -5615225 - MIR SINE MIR -115 147 4 2265 94 3 3 chr17 79823575 79823882 -5614598 - AluY SINE Alu -4 307 1 374 276 25 49 chr17 79824448 79824611 -5613869 - MIR SINE MIR -22 240 82 648 86 0 0 chr17 79825611 79825716 -5612764 + (TG)n Simple_repeat Simple_repeat 1 105 0 223 24 24 49 chr17 79825961 79826002 -5612478 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 1072 164 18 53 chr17 79826975 79827200 -5611280 - MER20 DNA MER1_type 0 219 3 400 247 0 31 chr17 79829553 79829650 -5608830 - MIR SINE MIR -62 200 107 236 257 0 40 chr17 79829957 79830058 -5608422 + L1MC/D LINE L1 5796 5892 -1916 1229 175 39 77 chr17 79830251 79830537 -5607943 - AluJb SINE Alu -14 298 24 2451 77 3 0 chr17 79830579 79830891 -5607589 + AluSp SINE Alu 1 313 0 2069 129 0 16 chr17 79831282 79831456 -5607024 - AluSc SINE Alu -4 305 137 2314 84 0 3 chr17 79831456 79831752 -5606728 - AluSp SINE Alu -18 295 1 2069 129 0 16 chr17 79831752 79831887 -5606593 - AluSc SINE Alu -172 137 1 1780 134 24 14 chr17 79831889 79832180 -5606300 - AluJo SINE Alu -18 294 1 196 291 105 12 chr17 79832183 79832269 -5606211 - MIR SINE MIR -66 196 103 2243 105 0 10 chr17 79832563 79832877 -5605603 + AluSx SINE Alu 1 311 -1 229 255 157 10 chr17 79832925 79833027 -5605453 - MIR3 SINE MIR -87 121 5 186 267 133 0 chr17 79833040 79833115 -5605365 - L2 LINE L2 -606 2708 2624 240 247 67 45 chr17 79834078 79834167 -5604313 + MIR SINE MIR 20 110 -152 825 160 8 0 chr17 79834296 79834427 -5604053 + AluJo/FLAM SINE Alu 1 132 -180 946 136 7 0 chr17 79834427 79834567 -5603913 - AluJo SINE Alu -170 142 2 2372 88 0 0 chr17 79835118 79835424 -5603056 - AluY SINE Alu -5 306 1 749 158 0 0 chr17 79835447 79835561 -5602919 - FLAM_A SINE Alu -16 117 4 476 285 276 5 chr17 79835566 79835935 -5602545 - L2 LINE L2 -797 2517 2049 542 180 0 0 chr17 79835938 79836038 -5602442 + AluSg/x SINE Alu 206 305 -5 2270 90 7 13 chr17 79836049 79836359 -5602121 + AluSq SINE Alu 1 308 -5 239 339 32 8 chr17 79836360 79836484 -5601996 + L1ME LINE L1 5311 5437 -684 860 202 40 52 chr17 79836486 79836738 -5601742 + L1MC4 LINE L1 6765 7013 -1029 2387 66 0 3 chr17 79836739 79837041 -5601439 + AluY SINE Alu 1 301 -10 1487 155 35 16 chr17 79837144 79837237 -5601243 + AluJo SINE Alu 25 115 -197 213 39 0 0 chr17 79837237 79837263 -5601217 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 1487 155 35 16 chr17 79837263 79837427 -5601053 + AluJo SINE Alu 115 287 -25 386 322 0 0 chr17 79837434 79837524 -5600956 + L1MC4 LINE L1 6614 6703 -1339 328 378 0 0 chr17 79837462 79837552 -5600928 - L1MC4 LINE L1 -1339 6703 6614 * 180 0 0 0 chr17 79837552 79837572 -5600908 + (TG)n Simple_repeat Simple_repeat 2 21 0 363 193 0 92 chr17 79837590 79837699 -5600781 + L1MC5 LINE L1 7036 7134 -827 976 254 49 14 chr17 79837699 79837985 -5600495 - MLT1E LTR MaLR 0 593 298 695 222 18 0 chr17 79837985 79838152 -5600328 + MER45B DNA AcHobo 1 170 -870 1131 138 40 45 chr17 79838301 79838336 -5600144 + MER45B DNA AcHobo 607 641 -399 2184 116 0 10 chr17 79838336 79838647 -5599833 + AluSx SINE Alu 5 312 0 1131 138 40 45 chr17 79838647 79838858 -5599622 + MER45B DNA AcHobo 641 852 -188 548 143 0 0 chr17 79838871 79838948 -5599532 + FLAM_A SINE Alu 22 98 -44 1142 223 154 67 chr17 79840086 79840483 -5597997 + MLT1D LTR MaLR 2 446 -59 2212 116 3 0 chr17 79840483 79840794 -5597686 - AluSx SINE Alu 0 312 1 1142 223 154 67 chr17 79840794 79840858 -5597622 + MLT1D LTR MaLR 446 503 -2 797 196 0 0 chr17 79841291 79841424 -5597056 - FLAM_A SINE Alu 0 133 1 2248 126 0 0 chr17 79841450 79841760 -5596720 + AluSx SINE Alu 2 311 -1 2105 116 10 0 chr17 79841765 79842066 -5596414 + AluSx SINE Alu 1 304 -8 358 307 41 48 chr17 79842067 79842337 -5596143 - L2 LINE L2 -450 2864 2597 191 311 27 0 chr17 79842650 79842724 -5595756 + L2 LINE L2 2239 2314 -1000 2167 94 3 7 chr17 79842757 79843055 -5595425 - AluSg SINE Alu -13 297 1 2351 90 3 0 chr17 79843062 79843373 -5595107 - AluSx SINE Alu 0 312 1 1085 129 6 6 chr17 79843494 79843664 -5594816 + AluJb SINE Alu 143 312 0 2160 106 0 0 chr17 79843683 79843975 -5594505 + AluSg SINE Alu 1 292 -18 690 183 0 0 chr17 79845031 79845157 -5593323 + MSTB1 LTR MaLR 1 126 -306 1680 182 91 5 chr17 79845204 79845589 -5592891 + MER50 LTR ERV1 1 418 -316 1038 99 0 7 chr17 79846900 79847052 -5591428 + AluY SINE Alu 150 300 -11 646 186 17 8 chr17 79847057 79847175 -5591305 + AluSg/x SINE Alu 171 289 -23 546 106 12 0 chr17 79847180 79847265 -5591215 - MSTC LTR MaLR -51 377 292 292 109 91 0 chr17 79847281 79847336 -5591144 - MER66B LTR ERV1 -142 344 285 264 162 44 15 chr17 79847347 79847415 -5591065 - MSTC LTR MaLR -166 262 193 574 102 31 94 chr17 79847415 79847466 -5591014 - L1MA5 LINE L1 -2 6298 6245 2306 48 3 36 chr17 79847466 79847775 -5590705 - AluY SINE Alu -12 299 1 574 102 31 94 chr17 79847775 79847851 -5590629 - L1MA5 LINE L1 -55 6245 6179 1303 164 4 18 chr17 79847851 79848077 -5590403 - AluJb SINE Alu -13 299 77 840 123 29 7 chr17 79848142 79848280 -5590200 - FRAM SINE Alu -17 159 19 1965 107 49 34 chr17 79850260 79850588 -5587892 - MER1B DNA MER1_type -4 333 1 2058 114 27 13 chr17 79851345 79851646 -5586834 - AluSx SINE Alu -9 303 1 2319 191 31 40 chr17 79852304 79852721 -5585759 - LTR40a LTR ERVL 0 519 105 2559 60 3 0 chr17 79852721 79853022 -5585458 - AluY SINE Alu -9 302 1 2319 191 31 40 chr17 79853022 79853081 -5585399 - LTR40a LTR ERVL -414 105 47 186 43 0 0 chr17 79853257 79853280 -5585200 + (CAAAG)n Simple_repeat Simple_repeat 2 24 0 204 135 0 0 chr17 79853670 79853707 -5584773 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 1072 161 0 94 chr17 79853711 79853798 -5584682 - AluJo SINE Alu -8 304 210 2279 96 0 26 chr17 79853798 79854100 -5584380 - AluSc SINE Alu -15 294 1 1072 161 0 94 chr17 79854100 79854236 -5584244 - AluJo SINE Alu -102 210 102 540 186 57 40 chr17 79854238 79854362 -5584118 - MER8 DNA MER2_type -113 126 1 36 23 0 0 chr17 79854373 79854416 -5584064 + AT_rich Low_complexity Low_complexity 1 43 0 263 262 27 0 chr17 79854471 79854565 -5583915 - L1MCa LINE L1 -4515 1911 1770 614 93 0 0 chr17 79854565 79854640 -5583840 - AluSq SINE Alu -154 159 85 2331 90 7 0 chr17 79854703 79854992 -5583488 - AluSx SINE Alu -21 291 1 785 215 32 77 chr17 79855062 79855118 -5583362 + L1MC5 LINE L1 7617 7674 -287 771 136 15 38 chr17 79855118 79855250 -5583230 + AluJo/FLAM SINE Alu 1 129 -173 2248 121 0 3 chr17 79855250 79855555 -5582925 + AluSx SINE Alu 1 304 -8 785 215 32 77 chr17 79855555 79855808 -5582672 + L1MC5 LINE L1 7672 7913 -48 21 0 0 0 chr17 79856413 79856434 -5582046 + AT_rich Low_complexity Low_complexity 1 21 0 2229 103 3 0 chr17 79856521 79856813 -5581667 - AluSq SINE Alu -20 293 1 3054 156 39 18 chr17 79856849 79857407 -5581073 + MER21B LTR ERV1 273 842 -21 426 260 115 24 chr17 79857430 79857638 -5580842 + HAL1 LINE L1 2208 2434 -73 2341 110 3 0 chr17 79857978 79858286 -5580194 - AluSx SINE Alu -3 309 1 540 163 16 0 chr17 79858293 79858416 -5580064 - L1MDa LINE L1 -4476 2064 1940 649 259 60 0 chr17 79858446 79858662 -5579818 - L1M4 LINE L1 -1354 4792 4564 248 293 73 0 chr17 79858672 79858795 -5579685 - L1M4 LINE L1 -1617 4529 4398 2536 50 0 3 chr17 79858927 79859226 -5579254 + AluY SINE Alu 1 298 -13 297 245 42 14 chr17 79859516 79859659 -5578821 - L1M4 LINE L1 -1744 4402 4256 2444 75 0 0 chr17 79859659 79859951 -5578529 + AluSg SINE Alu 1 292 -18 1900 164 0 26 chr17 79859951 79860263 -5578217 - AluJb SINE Alu -8 304 1 483 163 0 0 chr17 79860263 79860349 -5578131 + L1MB4 LINE L1 6010 6095 -85 2569 60 0 0 chr17 79860533 79860835 -5577645 - AluY SINE Alu -9 302 1 676 252 179 9 chr17 79861553 79861771 -5576709 + MIR SINE MIR 2 256 -6 360 150 0 0 chr17 79861958 79862018 -5576462 + MLT1H LTR MaLR 56 115 -434 423 252 70 0 chr17 79862031 79862146 -5576334 + MLT1H LTR MaLR 392 514 -35 1709 158 50 7 chr17 79862349 79862646 -5575834 - AluJb SINE Alu -2 310 1 2219 100 4 0 chr17 79862861 79863170 -5575310 + AluSx SINE Alu 2 311 0 2376 107 0 0 chr17 79863179 79863479 -5575001 + AluSq SINE Alu 1 300 -13 1874 163 3 11 chr17 79864137 79864419 -5574061 - AluJo SINE Alu -32 280 1 318 98 0 0 chr17 79864443 79864494 -5573986 + (TG)n Simple_repeat Simple_repeat 1 51 0 1522 171 60 19 chr17 79864732 79865001 -5573479 + AluJo SINE Alu 12 291 -21 1169 128 11 0 chr17 79865092 79865271 -5573209 - MER41B LTR ERV1 0 635 455 658 95 0 11 chr17 79865274 79865369 -5573111 - AluY SINE Alu -178 133 40 2666 140 40 0 chr17 79865370 79865821 -5572659 - MER41B LTR ERV1 -166 469 1 2314 113 0 10 chr17 79865957 79866266 -5572214 + AluSx SINE Alu 1 306 -6 2737 136 29 0 chr17 79866597 79867009 -5571471 - MSTB LTR MaLR -2 424 1 2371 109 0 3 chr17 79867087 79867391 -5571089 + AluSx SINE Alu 1 303 -9 189 74 0 0 chr17 79867427 79867454 -5571026 + (T)n Simple_repeat Simple_repeat 1 27 0 1746 117 0 0 chr17 79867463 79867694 -5570786 - AluSq SINE Alu -78 235 5 697 130 114 49 chr17 79867701 79867824 -5570656 - FLAM_C SINE Alu -11 132 2 2177 123 3 10 chr17 79867840 79868149 -5570331 - AluSx SINE Alu -5 307 1 2490 73 3 3 chr17 79868308 79868611 -5569869 + AluY SINE Alu 1 303 -8 370 200 32 11 chr17 79868753 79868848 -5569632 - LTR16A1 LTR ERVL -17 440 344 2712 95 95 5 chr17 79869645 79870056 -5568424 - LTR7 LTR ERV1 -2 448 1 2296 93 53 13 chr17 79870056 79870431 -5568049 - HERVH LTR ERV1 0 7713 7324 1350 130 19 0 chr17 79870431 79870647 -5567833 - HERVH LTR ERV1 -1894 5819 5600 4237 131 8 3 chr17 79870648 79871307 -5567173 - HERVH LTR ERV1 -2564 5149 4488 3179 118 6 6 chr17 79871309 79871811 -5566669 - HERVH LTR ERV1 -3720 3993 3492 858 142 20 0 chr17 79871801 79871949 -5566531 - HERVH LTR ERV1 -4423 3290 3140 * 15754 88 12 12 chr17 79871943 79874740 -5563740 - HERVH LTR ERV1 -4726 2987 1 2605 84 91 42 chr17 79874742 79875169 -5563311 - LTR7 LTR ERV1 -2 448 1 501 240 80 24 chr17 79875250 79875375 -5563105 + L2 LINE L2 3136 3267 -5 1653 152 23 36 chr17 79875383 79875625 -5562855 + AluJo SINE Alu 9 248 -64 4825 115 61 26 chr17 79875625 79876379 -5562101 - LTR17 LTR ERV1 0 780 1 1653 152 23 36 chr17 79876379 79876438 -5562042 + AluJo SINE Alu 248 306 -6 503 214 175 10 chr17 79876494 79876700 -5561780 + MLT1C LTR MaLR 6 245 -222 5604 172 179 63 chr17 79877583 79879122 -5559358 - pTR5 LTR ERV1 0 2438 450 480 162 0 30 chr17 79879305 79879404 -5559076 - MER34B LTR ERV1 0 565 470 2332 106 0 0 chr17 79879404 79879697 -5558783 + AluSx SINE Alu 1 293 -19 1728 204 31 55 chr17 79879802 79879931 -5558549 - MER34B LTR ERV1 -88 477 346 2423 82 0 0 chr17 79879931 79880234 -5558246 - AluSg SINE Alu -7 303 1 1728 204 31 55 chr17 79880234 79880477 -5558003 - MER34B LTR ERV1 -219 346 117 2285 101 10 0 chr17 79880477 79880775 -5557705 - AluSx SINE Alu -11 301 1 1728 204 31 55 chr17 79880775 79880890 -5557590 - MER34B LTR ERV1 -448 117 1 549 257 50 33 chr17 79881025 79881239 -5557241 - LTR65 LTR ERV1 -1 649 449 1338 167 5 9 chr17 79881239 79881454 -5557026 + AluJo SINE Alu 96 309 -3 859 173 45 113 chr17 79881490 79881756 -5556724 - LTR65 LTR ERV1 -256 413 166 2270 100 0 10 chr17 79882152 79882451 -5556029 + AluJb SINE Alu 1 296 -16 1112 145 0 0 chr17 79882451 79882610 -5555870 + AluJb SINE Alu 134 292 -20 2607 218 82 75 chr17 79882614 79883397 -5555083 - L1MC4a LINE L1 -788 7020 6244 2422 89 7 0 chr17 79883397 79883700 -5554780 - AluSx SINE Alu -7 305 1 2146 122 3 0 chr17 79883710 79883996 -5554484 - AluSx SINE Alu -25 287 1 2607 218 82 75 chr17 79883996 79884218 -5554262 - L1MC4a LINE L1 -1572 6236 5997 1985 137 0 58 chr17 79884223 79884551 -5553929 - AluSx SINE Alu -3 309 1 1025 212 53 83 chr17 79884589 79884828 -5553652 + MER57A LTR ERV1 1 245 -158 2489 94 0 0 chr17 79884828 79885135 -5553345 - AluSc SINE Alu 0 309 3 2266 102 7 0 chr17 79885137 79885431 -5553049 - AluSx SINE Alu -16 296 1 1025 212 53 83 chr17 79885431 79885599 -5552881 + MER57A LTR ERV1 246 399 -4 875 118 0 22 chr17 79885619 79885755 -5552725 - FLAM_C SINE Alu 0 133 1 654 301 125 44 chr17 79885755 79886018 -5552462 - L1MC4a LINE L1 -749 5397 5157 2286 100 0 0 chr17 79886018 79886319 -5552161 - AluSc SINE Alu 0 301 1 654 301 125 44 chr17 79886319 79886451 -5552029 - L1MC4a LINE L1 -989 5157 5037 1941 94 8 4 chr17 79886451 79886707 -5551773 - AluSg SINE Alu -11 299 43 654 301 125 44 chr17 79886707 79887358 -5551122 - L1MC4a LINE L1 -1109 5037 4257 2212 87 24 0 chr17 79887863 79888200 -5550280 - AluSx SINE Alu 0 344 1 640 214 39 63 chr17 79888377 79888583 -5549897 - LTR37A LTR ERV1 -196 230 30 2753 33 0 0 chr17 79891472 79891774 -5546706 + AluY SINE Alu 1 302 -9 438 127 0 0 chr17 79891897 79891968 -5546512 + (TTCC)n Simple_repeat Simple_repeat 1 71 0 831 146 108 0 chr17 79891968 79892098 -5546382 - FRAM SINE Alu -32 144 1 2229 117 0 10 chr17 79893433 79893742 -5544738 - AluSx SINE Alu -6 306 1 352 236 79 22 chr17 79893810 79893899 -5544581 - L2 LINE L2 -6 3266 3173 2192 86 3 30 chr17 79894240 79894543 -5543937 - AluSc SINE Alu -10 299 5 1924 139 3 59 chr17 79894545 79894722 -5543758 - AluJo SINE Alu -6 306 154 288 0 0 0 chr17 79894722 79894754 -5543726 + (TG)n Simple_repeat Simple_repeat 1 32 0 1924 139 3 59 chr17 79894754 79894900 -5543580 - AluJo SINE Alu -158 154 1 2066 138 0 10 chr17 79896580 79896884 -5541596 + AluSx SINE Alu 1 301 -11 2509 76 3 0 chr17 79896885 79897189 -5541291 + AluSp SINE Alu 1 305 -8 900 162 66 12 chr17 79897282 79897449 -5541031 - AluJb SINE Alu -16 296 121 2411 88 0 31 chr17 79898248 79898565 -5539915 + AluSx SINE Alu 1 307 -5 1993 114 11 0 chr17 79899032 79899321 -5539159 + AluSx SINE Alu 19 310 0 263 389 48 18 chr17 79899381 79899548 -5538932 - L2 LINE L2 -5 3267 3096 300 297 60 70 chr17 79899681 79899866 -5538614 - L1ME4a LINE L1 0 6121 5939 492 123 0 37 chr17 79900205 79900275 -5538205 + AluS SINE Alu 226 294 -17 5574 52 16 6 chr17 79900275 79900946 -5537534 + SVA Other Other 709 1386 0 1026 135 36 16 chr17 79901022 79901215 -5537265 - L1MD1 LINE L1 -165 6077 5881 1335 177 9 0 chr17 79901487 79901702 -5536778 - AluSg/x SINE Alu -11 299 83 393 80 0 0 chr17 79901786 79901836 -5536644 - U6 snRNA snRNA -6 101 52 1221 100 0 84 chr17 79902034 79902224 -5536256 - AluSg/x SINE Alu -13 299 126 2145 119 10 6 chr17 79902224 79902536 -5535944 - AluSq SINE Alu 0 313 1 286 204 68 23 chr17 79902859 79902947 -5535533 - L2 LINE L2 0 3313 3222 2135 124 7 0 chr17 79902951 79903249 -5535231 + AluSx SINE Alu 1 300 -12 522 0 0 0 chr17 79903295 79903353 -5535127 + (CA)n Simple_repeat Simple_repeat 2 59 0 229 266 31 0 chr17 79904186 79904250 -5534230 + MLT1K LTR MaLR 523 588 0 492 341 37 41 chr17 79904252 79904522 -5533958 + L1MC4a LINE L1 4961 5229 -917 3302 104 6 8 chr17 79904522 79905010 -5533470 + LTR15 LTR ERV1 1 487 -6 334 308 164 9 chr17 79905050 79905391 -5533089 + L1MC4a LINE L1 5255 5648 -2160 276 309 67 0 chr17 79905434 79905583 -5532897 + L1MC4a LINE L1 5753 5911 -1897 230 114 0 23 chr17 79905585 79905629 -5532851 + (TA)n Simple_repeat Simple_repeat 1 43 0 311 273 0 40 chr17 79905659 79905758 -5532722 - L1MC4 LINE L1 -1333 6709 6615 * 314 244 33 44 chr17 79905750 79905840 -5532640 - L1MC4 LINE L1 -1338 6704 6616 398 88 15 0 chr17 79905844 79905912 -5532568 + (TCTA)n Simple_repeat Simple_repeat 3 71 0 701 238 219 9 chr17 79905918 79906128 -5532352 + MIR SINE MIR 4 257 -5 2161 95 37 10 chr17 79906305 79906599 -5531881 + AluSx SINE Alu 1 302 -10 194 267 148 20 chr17 79907604 79907705 -5530775 + MIR SINE MIR 70 183 -79 433 314 105 0 chr17 79907815 79908025 -5530455 - MIR SINE MIR 0 262 31 856 120 8 45 chr17 79908031 79908164 -5530316 - FLAM_C SINE Alu -5 128 1 2328 91 10 0 chr17 79908173 79908471 -5530009 - AluSc SINE Alu -8 301 1 1578 163 36 33 chr17 79909549 79909850 -5528630 - AluJo SINE Alu -10 302 1 448 178 78 23 chr17 79910057 79910186 -5528294 - LTR37A LTR ERV1 0 426 291 1924 250 59 46 chr17 79910212 79910744 -5527736 - L1M4 LINE L1 -4833 2022 1520 1446 190 67 35 chr17 79910744 79911028 -5527452 - AluJo SINE Alu -19 293 1 1924 250 59 46 chr17 79911028 79911366 -5527114 - L1M4 LINE L1 -5335 1520 1188 2493 91 0 0 chr17 79911373 79911682 -5526798 - AluSc SINE Alu 0 309 1 1420 251 104 33 chr17 79911693 79912075 -5526405 - L1M4 LINE L1 -6363 496 75 2069 135 0 0 chr17 79912075 79912383 -5526097 + AluJb SINE Alu 1 308 0 1420 251 104 33 chr17 79912383 79912450 -5526030 - L1M4 LINE L1 -6784 75 14 1116 299 51 25 chr17 79912512 79912943 -5525537 - LTR47B LTR ERVL 0 443 2 272 133 24 24 chr17 79912968 79913050 -5525430 - Zaphod DNA AcHobo -3227 804 723 395 171 145 0 chr17 79913050 79913126 -5525354 - Tigger1 DNA MER2_type -1 2417 2331 516 117 0 29 chr17 79913149 79913252 -5525228 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 2204 131 0 0 chr17 79913252 79913564 -5524916 - AluSq SINE Alu -1 312 1 347 120 0 27 chr17 79913565 79913640 -5524840 + Tigger1 DNA MER2_type 2219 2291 -127 664 143 34 27 chr17 79913699 79913846 -5524634 + Tigger1 DNA MER2_type 1881 2028 -390 1214 119 0 0 chr17 79913868 79914065 -5524415 - AluSg/x SINE Alu 0 320 124 1162 139 0 0 chr17 79914384 79914557 -5523923 + AluSq SINE Alu 137 309 -4 2904 49 0 25 chr17 79914696 79915061 -5523419 - L1PA8 LINE L1 -13 6159 5804 239 330 0 0 chr17 79915377 79915471 -5523009 + CT-rich Low_complexity Low_complexity 2 95 0 4101 111 30 0 chr17 79915744 79916367 -5522113 - Tigger1 DNA MER2_type -527 1891 1250 2224 120 3 0 chr17 79916370 79916671 -5521809 + AluY SINE Alu 1 302 -9 2213 121 20 3 chr17 79916679 79916985 -5521495 + AluSx SINE Alu 1 311 -1 1000 168 15 20 chr17 79916999 79917196 -5521284 - Tigger1 DNA MER2_type -2222 196 1 744 195 19 0 chr17 79917199 79917353 -5521127 - Zaphod DNA AcHobo -3307 724 568 766 192 0 0 chr17 79917364 79917494 -5520986 - AluJo SINE Alu -176 136 7 310 269 118 0 chr17 79917500 79917593 -5520887 - Zaphod DNA AcHobo -3457 574 471 2471 80 3 0 chr17 79917594 79917893 -5520587 + AluSq SINE Alu 1 300 -13 1255 110 0 0 chr17 79917894 79918058 -5520422 + AluSg/x SINE Alu 135 298 -14 1263 259 53 0 chr17 79918063 79918383 -5520097 - Zaphod DNA AcHobo -3577 454 118 2635 58 0 0 chr17 79918393 79918702 -5519778 - AluY SINE Alu -2 309 1 2411 106 0 0 chr17 79918844 79919145 -5519335 - AluSx SINE Alu -11 301 1 2257 112 0 3 chr17 79919148 79919442 -5519038 - AluSx SINE Alu -17 295 3 807 97 0 0 chr17 79919972 79920075 -5518405 + U6 snRNA snRNA 1 103 -4 294 177 16 16 chr17 79920114 79920176 -5518304 + MER67C LTR ERV1 649 710 0 374 246 293 11 chr17 79920176 79920311 -5518169 - L2 LINE L2 -42 3271 3175 1818 153 0 4 chr17 79920311 79920592 -5517888 + AluJo SINE Alu 1 280 -32 195 42 0 0 chr17 79920592 79920616 -5517864 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 374 246 293 11 chr17 79920616 79920670 -5517810 - L2 LINE L2 -137 3176 3027 778 152 197 0 chr17 79920708 79920886 -5517594 - MSTB LTR MaLR -40 386 174 2381 99 0 0 chr17 79920886 79921189 -5517291 - AluSx SINE Alu -9 303 1 1744 163 6 35 chr17 79922510 79922626 -5515854 + AluSx SINE Alu 1 119 -193 2135 150 0 0 chr17 79922626 79922933 -5515547 - AluSx SINE Alu -5 307 1 1744 163 6 35 chr17 79922933 79923135 -5515345 + AluSx SINE Alu 119 310 -2 2250 120 3 0 chr17 79924127 79924427 -5514053 - AluSx SINE Alu -11 301 1 1690 208 73 44 chr17 79924534 79925054 -5513426 + L1MC4 LINE L1 7508 8042 0 2347 115 3 10 chr17 79925069 79925383 -5513097 + AluSx SINE Alu 1 312 0 299 237 145 20 chr17 79925410 79925562 -5512918 + L1MC5 LINE L1 7058 7228 -733 227 273 87 56 chr17 79925743 79925826 -5512654 + L1MC4 LINE L1 7506 7585 -457 2595 59 3 3 chr17 79925826 79926133 -5512347 + AluSp SINE Alu 1 307 -6 227 273 87 56 chr17 79926133 79926210 -5512270 + L1MC4 LINE L1 7585 7671 -371 1675 135 104 0 chr17 79926252 79926511 -5511969 - AluSg SINE Alu -20 290 5 1472 169 96 15 chr17 79926598 79926870 -5511610 - AluJo SINE Alu -10 302 9 2313 111 13 3 chr17 79926883 79927190 -5511290 - AluSx SINE Alu -2 310 1 595 213 207 82 chr17 79927365 79927629 -5510851 - MER34B LTR ERV1 -168 397 77 2324 102 0 7 chr17 79927629 79927934 -5510546 - AluSx SINE Alu -9 303 1 595 213 207 82 chr17 79927934 79928022 -5510458 - MER34B LTR ERV1 -488 77 1 352 236 123 0 chr17 79928118 79928224 -5510256 + HERV16 LTR ERVL 5 123 -4873 1854 180 0 49 chr17 79928520 79928725 -5509755 - AluJo SINE Alu 0 312 127 234 0 0 0 chr17 79928725 79928751 -5509729 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1854 180 0 49 chr17 79928751 79928873 -5509607 - AluJo SINE Alu -185 127 1 441 187 13 0 chr17 79928880 79928955 -5509525 - FLAM SINE Alu -18 125 50 225 135 0 0 chr17 79928956 79928993 -5509487 - LTR61 LTR ERV1 0 595 559 436 328 123 64 chr17 79929078 79929214 -5509266 - L1ME4a LINE L1 -115 6006 5879 2386 107 0 0 chr17 79929214 79929523 -5508957 - AluSg SINE Alu -1 309 1 436 328 123 64 chr17 79929523 79929914 -5508566 - L1ME4a LINE L1 -242 5879 5448 269 206 165 0 chr17 79929926 79930023 -5508457 - L1P5 LINE L1 -718 5438 5326 237 238 0 109 chr17 79930131 79930189 -5508291 - MER34 LTR ERV1 -452 90 46 1626 156 34 37 chr17 79930189 79930484 -5507996 - AluJo SINE Alu -18 294 1 237 238 0 109 chr17 79930484 79930526 -5507954 - MER34 LTR ERV1 -496 46 1 1298 137 8 69 chr17 79930526 79930635 -5507845 - L1MB3 LINE L1 -71 6112 5998 2337 106 0 0 chr17 79930635 79930936 -5507544 + AluSx SINE Alu 1 301 -11 1298 137 8 69 chr17 79930936 79931088 -5507392 - L1MB3 LINE L1 -185 5998 5867 380 289 62 8 chr17 79931309 79931437 -5507043 + MIR SINE MIR 2 136 -126 782 243 23 6 chr17 79931437 79931610 -5506870 + AluJb SINE Alu 122 297 -15 347 286 39 11 chr17 79931798 79931976 -5506504 + LTR16A LTR ERVL 267 449 -1 2100 118 34 3 chr17 79932024 79932320 -5506160 + AluSx SINE Alu 1 305 -7 2222 124 0 0 chr17 79932440 79932738 -5505742 + AluSx SINE Alu 1 298 -14 4071 139 35 77 chr17 79932832 79933278 -5505202 - L1MB8 LINE L1 -10 6168 5786 1905 128 6 67 chr17 79933278 79933591 -5504889 - AluSx SINE Alu -18 294 1 4071 139 35 77 chr17 79933591 79934066 -5504414 - L1MB8 LINE L1 -392 5786 5293 194 197 189 74 chr17 79934066 79934188 -5504292 + MIR SINE MIR 125 260 -2 193 259 52 17 chr17 79934248 79934306 -5504174 + L2 LINE L2 3212 3271 -1 234 0 0 0 chr17 79935050 79935076 -5503404 + (TG)n Simple_repeat Simple_repeat 2 27 0 239 59 0 0 chr17 79935292 79935326 -5503154 + Alu SINE Alu 1 34 -268 898 256 136 48 chr17 79935909 79936408 -5502072 + L1MC4a LINE L1 5318 5860 -1948 418 241 53 15 chr17 79936736 79936869 -5501611 - LTR16A LTR ERVL -179 271 134 669 240 179 46 chr17 79938266 79938784 -5499696 + MLT1L LTR MaLR 20 588 0 2002 81 12 0 chr17 79939045 79939291 -5499189 - AluSx SINE Alu -3 309 61 188 387 27 27 chr17 79939851 79939962 -5498518 + L2 LINE L2 3114 3224 -48 1969 106 98 0 chr17 79940137 79940411 -5498069 + AluSx SINE Alu 1 301 -11 1003 163 42 0 chr17 79940420 79940586 -5497894 + AluJb SINE Alu 134 306 -6 2269 101 3 0 chr17 79940667 79940963 -5497517 + AluSx SINE Alu 1 297 -15 317 225 38 25 chr17 79941878 79941958 -5496522 + MER91A DNA MER1_type 116 196 0 2026 156 23 0 chr17 79942669 79942970 -5495510 + AluJb SINE Alu 1 308 -4 459 311 62 5 chr17 79946839 79947048 -5491432 - MER58A DNA MER1_type -3 221 1 2228 98 0 44 chr17 79949853 79950170 -5488310 + AluSx SINE Alu 1 303 -9 2054 92 0 46 chr17 79952721 79953049 -5485431 - AluSq SINE Alu 0 313 1 235 310 58 0 chr17 79953269 79953356 -5485124 + L1ME LINE L1 5614 5705 -416 2088 117 3 13 chr17 79953381 79953689 -5484791 + AluSx SINE Alu 1 305 -7 1214 168 5 5 chr17 79954084 79954286 -5484194 + AluJo SINE Alu 1 202 -110 1158 132 0 0 chr17 79954361 79954528 -5483952 - AluJb SINE Alu -9 303 137 229 229 21 0 chr17 79954528 79954576 -5483904 + MER21B LTR ERV1 42 90 -773 2399 248 98 41 chr17 79954598 79955387 -5483093 + MER21B LTR ERV1 19 852 -11 263 265 132 0 chr17 79955550 79955618 -5482862 - L2 LINE L2 -89 3183 3107 848 194 19 6 chr17 79955725 79955885 -5482595 + AluJb SINE Alu 137 298 -14 2266 83 10 0 chr17 79955909 79956209 -5482271 - AluSp SINE Alu -10 303 1 2029 108 13 38 chr17 79956844 79957160 -5481320 + AluSg SINE Alu 1 308 -2 1740 137 25 7 chr17 79957220 79957531 -5480949 + AluJb SINE Alu 1 316 0 1243 203 8 4 chr17 79958241 79958502 -5479978 - AluJb SINE Alu -10 302 41 1974 87 0 8 chr17 79958552 79958845 -5479635 + AluSq SINE Alu 21 311 0 561 240 80 0 chr17 79958859 79959009 -5479471 + Tigger8 DNA MER2_type 235 396 -270 225 0 0 0 chr17 79959010 79959035 -5479445 + (TG)n Simple_repeat Simple_repeat 1 25 0 230 322 67 22 chr17 79959216 79959396 -5479084 - L2 LINE L2 -176 3096 2909 2014 119 0 7 chr17 79959467 79959776 -5478704 + AluSx SINE Alu 1 307 0 1748 174 3 3 chr17 79959894 79960205 -5478275 + AluJo SINE Alu 1 311 -1 1901 177 22 57 chr17 79960694 79961096 -5477384 + MLT1B LTR MaLR 3 390 0 338 269 10 10 chr17 79961541 79961645 -5476835 + GA-rich Low_complexity Low_complexity 1 104 0 2267 91 7 3 chr17 79962369 79962677 -5475803 - AluSx SINE Alu -3 309 1 1695 176 0 3 chr17 79962813 79963102 -5475378 - AluJo SINE Alu -24 288 1 2051 85 10 49 chr17 79963614 79963919 -5474561 - AluSx SINE Alu -10 302 10 261 286 52 0 chr17 79964024 79964101 -5474379 - L3 LINE CR1 -100 1477 1397 1446 185 0 4 chr17 79965881 79966141 -5472339 + AluJo SINE Alu 1 259 -53 231 36 0 0 chr17 79966146 79966174 -5472306 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr17 79966173 79966195 -5472285 + (GAA)n Simple_repeat Simple_repeat 2 23 0 * 1818 143 3 11 chr17 79966224 79966511 -5471969 + AluSx SINE Alu 1 285 -27 249 83 0 0 chr17 79966511 79966547 -5471933 + (TA)n Simple_repeat Simple_repeat 2 37 0 671 164 0 0 chr17 79966668 79966772 -5471708 + AluJb SINE Alu 183 286 -26 1682 172 7 0 chr17 79966996 79967275 -5471205 + AluJb SINE Alu 1 281 -31 641 130 0 0 chr17 79967291 79967383 -5471097 - HY4 scRNA scRNA 0 93 2 1082 111 12 23 chr17 79967607 79967778 -5470702 + AluSg/x SINE Alu 133 301 -9 2576 40 0 0 chr17 79967857 79968161 -5470319 - AluY SINE Alu -7 304 1 2044 112 14 0 chr17 79968175 79968461 -5470019 + AluSq SINE Alu 17 306 -7 1729 225 24 11 chr17 79969166 79969535 -5468945 + MLT1A2 LTR MaLR 1 374 0 990 238 84 48 chr17 79970461 79970915 -5467565 - L1MC4 LINE L1 -1 8041 7572 2315 81 7 3 chr17 79970949 79971258 -5467222 - AluSx SINE Alu 0 312 3 50 87 0 0 chr17 79974389 79974516 -5463964 + GC_rich Low_complexity Low_complexity 1 127 0 247 172 21 65 chr17 79974648 79974741 -5463739 + (CCCCG)n Simple_repeat Simple_repeat 2 90 0 2077 105 7 7 chr17 79975838 79976133 -5462347 - AluSx SINE Alu -17 295 1 23 0 0 0 chr17 79976133 79976156 -5462324 + AT_rich Low_complexity Low_complexity 1 23 0 1115 177 0 0 chr17 79976173 79976348 -5462132 - FAM SINE Alu 0 175 1 2015 120 17 0 chr17 79976763 79977054 -5461426 - AluSx SINE Alu -16 296 1 903 134 0 0 chr17 79978478 79978605 -5459875 - FLAM_C SINE Alu -16 127 1 792 174 0 0 chr17 79980883 79981004 -5457476 - FLAM_C SINE Alu -22 121 1 1706 148 6 44 chr17 79981216 79981365 -5457115 + AluJb SINE Alu 1 133 -179 2222 107 0 7 chr17 79981365 79981673 -5456807 + AluSg SINE Alu 1 306 -4 1706 148 6 44 chr17 79981673 79981840 -5456640 + AluJb SINE Alu 133 305 -7 2040 142 0 0 chr17 79982950 79983245 -5455235 - AluSx SINE Alu -17 295 1 2097 78 0 72 chr17 79983496 79983816 -5454664 + AluSq SINE Alu 1 297 -16 845 191 65 0 chr17 79985745 79985913 -5452567 + MER58A DNA MER1_type 46 224 0 559 176 78 0 chr17 79986092 79986194 -5452286 + FLAM_C SINE Alu 2 111 -32 2124 123 3 3 chr17 79986220 79986529 -5451951 + AluSx SINE Alu 1 309 -3 2170 112 3 0 chr17 79986606 79986902 -5451578 - AluSx SINE Alu -15 297 1 2301 77 0 3 chr17 79987097 79987396 -5451084 - AluY SINE Alu -12 299 2 1950 122 17 3 chr17 79987783 79988077 -5450403 - AluSx SINE Alu -14 298 1 2266 96 3 6 chr17 79988192 79988505 -5449975 + AluSx SINE Alu 1 312 0 591 204 130 31 chr17 79988555 79988717 -5449763 + MER5B DNA MER1_type 1 178 0 2248 88 10 0 chr17 79988783 79989090 -5449390 + AluSp SINE Alu 1 310 -3 213 65 0 0 chr17 79990444 79990475 -5448005 + (CCCCG)n Simple_repeat Simple_repeat 3 33 0 737 117 10 0 chr17 79991052 79991155 -5447325 - AluJb SINE Alu -207 105 2 918 142 37 0 chr17 79991383 79991545 -5446935 - FRAM SINE Alu -8 168 1 1504 150 23 0 chr17 79991653 79991913 -5446567 + AluJo SINE Alu 40 305 -7 514 189 11 0 chr17 79991963 79992053 -5446427 - FRAM SINE Alu -82 94 4 2234 94 7 0 chr17 79992069 79992367 -5446113 - AluSx SINE Alu -12 300 1 2245 80 0 19 chr17 79992442 79992755 -5445725 - AluY SINE Alu -4 307 1 2035 75 43 7 chr17 79992756 79993037 -5445443 - AluSx SINE Alu -21 291 1 2195 96 10 0 chr17 79993666 79993959 -5444521 + AluSx SINE Alu 1 296 -16 886 155 0 0 chr17 79993979 79994108 -5444372 + FLAM_C SINE Alu 3 131 -2 336 153 111 28 chr17 79994109 79994181 -5444299 + MER58B DNA MER1_type 263 340 -1 1225 183 100 59 chr17 79994275 79994343 -5444137 - MLT1A1 LTR MaLR -10 355 291 2121 103 0 13 chr17 79994343 79994478 -5444002 + AluSx SINE Alu 2 137 -175 2503 33 0 13 chr17 79994478 79994782 -5443698 + AluY SINE Alu 1 300 -11 2121 103 0 13 chr17 79994782 79994946 -5443534 + AluSx SINE Alu 137 297 -15 1225 183 100 59 chr17 79994946 79995216 -5443264 - MLT1A1 LTR MaLR -74 291 3 1820 104 50 44 chr17 79995732 79995877 -5442603 + AluSx SINE Alu 1 144 -168 2038 87 31 7 chr17 79995877 79996165 -5442315 + AluSp SINE Alu 1 295 -18 1820 104 50 44 chr17 79996165 79996316 -5442164 + AluSx SINE Alu 144 299 -13 216 189 0 0 chr17 79999034 79999071 -5439409 + A-rich Low_complexity Low_complexity 4 40 0 26 50 0 0 chr17 80000164 80000204 -5438276 + GC_rich Low_complexity Low_complexity 1 40 0 25 51 0 0 chr17 80000397 80000436 -5438044 + GC_rich Low_complexity Low_complexity 1 39 0 257 243 0 29 chr17 80002923 80002993 -5435487 + MIR SINE MIR 195 262 0 371 149 81 11 chr17 80003235 80003322 -5435158 - L1MA8 LINE L1 -4 6287 6195 2417 70 0 25 chr17 80003541 80003857 -5434623 + AluY SINE Alu 1 308 -3 597 302 61 13 chr17 80004121 80004358 -5434122 + MIR SINE MIR 1 229 -33 1999 109 0 46 chr17 80005148 80005451 -5433029 + AluJb SINE Alu 1 289 -23 2283 93 0 20 chr17 80006158 80006460 -5432020 - AluSg SINE Alu -14 296 1 33 25 0 0 chr17 80006981 80007021 -5431459 + AT_rich Low_complexity Low_complexity 1 40 0 2130 119 7 0 chr17 80007268 80007571 -5430909 - AluSp SINE Alu -8 305 1 263 247 41 93 chr17 80008328 80008425 -5430055 + MIR SINE MIR 41 132 -76 2509 145 58 9 chr17 80009012 80009461 -5429019 + Tigger1 DNA MER2_type 5 475 -1943 914 79 205 0 chr17 80009461 80009626 -5428854 - AluSg/x SINE Alu 0 323 133 6074 117 26 0 chr17 80009635 80010568 -5427912 + Tigger1 DNA MER2_type 487 1443 -975 1292 90 0 6 chr17 80010570 80010736 -5427744 - AluSg/x SINE Alu -17 295 131 819 129 27 27 chr17 80010736 80010883 -5427597 + Tigger1 DNA MER2_type 1443 1589 -829 732 149 0 0 chr17 80010889 80010996 -5427484 + AluJb SINE Alu 2 108 -204 2362 99 0 0 chr17 80010996 80011288 -5427192 - AluSg SINE Alu -17 293 2 326 250 168 47 chr17 80011573 80011829 -5426651 - L2 LINE L2 -5 3308 3022 1848 154 14 7 chr17 80012062 80012354 -5426126 + AluJo SINE Alu 1 294 -18 308 234 7 21 chr17 80012448 80012593 -5425887 + CT-rich Low_complexity Low_complexity 1 143 0 231 222 42 28 chr17 80012631 80012703 -5425777 - L2 LINE L2 -76 3237 3165 741 147 0 77 chr17 80012712 80012868 -5425612 - L1MB8 LINE L1 -6 6172 6029 1628 186 0 28 chr17 80012924 80013215 -5425265 + AluJb SINE Alu 27 309 -3 2331 101 0 0 chr17 80013266 80013563 -5424917 + AluSg SINE Alu 1 297 -13 383 204 23 11 chr17 80013683 80013771 -5424709 - L2 LINE L2 -536 2778 2690 2416 52 41 0 chr17 80014021 80014312 -5424168 - AluY SINE Alu -8 303 1 2075 103 11 0 chr17 80014464 80014736 -5423744 - AluSx SINE Alu -16 296 22 2401 78 3 3 chr17 80014765 80015060 -5423420 + AluY SINE Alu 1 295 -16 1801 148 16 32 chr17 80015072 80015382 -5423098 + AluJb SINE Alu 5 309 -3 467 283 168 4 chr17 80015444 80015631 -5422849 - MIR SINE MIR -52 156 10 1842 104 64 60 chr17 80016054 80016352 -5422128 - AluSx SINE Alu -13 299 1 823 59 29 0 chr17 80016568 80016670 -5421810 + U6 snRNA snRNA 1 105 -2 1829 154 3 49 chr17 80017047 80017372 -5421108 + AluJb SINE Alu 1 310 -2 2297 107 0 3 chr17 80018057 80018356 -5420124 + AluSx SINE Alu 1 298 -14 444 245 36 132 chr17 80018416 80018592 -5419888 - MIR SINE MIR 0 262 115 2107 120 20 0 chr17 80018592 80018884 -5419596 + AluSq SINE Alu 1 298 -15 444 245 36 132 chr17 80018884 80018958 -5419522 - MIR SINE MIR -147 115 35 379 346 0 0 chr17 80019340 80019444 -5419036 + L1MC4 LINE L1 6600 6703 -1339 347 287 0 43 chr17 80019362 80019456 -5419024 - L1MC4 LINE L1 -1339 6703 6614 * 2539 91 0 0 chr17 80019469 80019778 -5418702 - AluSp SINE Alu -2 311 3 2296 106 0 3 chr17 80019779 80020080 -5418400 - AluSx SINE Alu -12 300 1 2320 106 3 0 chr17 80020235 80020537 -5417943 + AluSx SINE Alu 1 303 -9 2341 101 0 7 chr17 80021385 80021683 -5416797 + AluSg1 SINE Alu 1 296 -13 348 241 66 90 chr17 80021819 80021954 -5416526 + L1 LINE L1 4905 5037 -1109 1892 164 3 10 chr17 80021954 80022259 -5416221 + AluJb SINE Alu 1 303 -9 348 241 66 90 chr17 80022259 80022289 -5416191 + L1 LINE L1 5037 5066 -1080 2105 137 40 86 chr17 80022449 80022619 -5415861 - Tigger2a DNA MER2_type -2275 433 257 1670 157 29 58 chr17 80022619 80022932 -5415548 + AluJo SINE Alu 1 304 -8 1960 116 3 85 chr17 80022936 80023107 -5415373 - AluSx SINE Alu -9 303 168 2137 128 0 10 chr17 80023107 80023413 -5415067 - AluY SINE Alu -8 303 1 1960 116 3 85 chr17 80023413 80023559 -5414921 - AluSx SINE Alu -144 168 12 2105 137 40 86 chr17 80023559 80023642 -5414838 - Tigger2a DNA MER2_type -2454 254 169 2133 87 22 51 chr17 80023642 80023954 -5414526 + AluSq SINE Alu 1 303 -10 2105 137 40 86 chr17 80023954 80024148 -5414332 - Tigger2a DNA MER2_type -2539 169 1 2114 122 3 29 chr17 80024175 80024486 -5413994 - AluSq SINE Alu -10 303 1 2071 121 0 7 chr17 80024580 80024861 -5413619 + AluSg SINE Alu 1 279 -31 399 241 181 34 chr17 80024871 80025137 -5413343 + L1ME4a LINE L1 5528 5832 -289 725 182 71 135 chr17 80025275 80025297 -5413183 - L1MB7 LINE L1 -19 6165 6143 2584 47 3 0 chr17 80025297 80025593 -5412887 + AluY SINE Alu 1 297 -14 725 182 71 135 chr17 80025593 80025981 -5412499 - L1MB7 LINE L1 -41 6143 5715 2898 104 46 74 chr17 80025981 80026112 -5412368 - LTR22B LTR ERVK -4 488 355 1799 45 50 5 chr17 80026112 80026333 -5412147 + AluY SINE Alu 72 302 -9 2898 104 46 74 chr17 80026333 80026699 -5411781 - LTR22B LTR ERVK -137 355 5 725 182 71 135 chr17 80026699 80026901 -5411579 - L1MB7 LINE L1 -469 5715 5502 2249 124 3 0 chr17 80026913 80027220 -5411260 - AluSx SINE Alu -4 308 1 1919 172 101 101 chr17 80027224 80027458 -5411022 - L1MB7 LINE L1 -808 5338 5105 5347 122 28 17 chr17 80027458 80027515 -5410965 - L1MA9 LINE L1 -5 6307 6252 1919 160 20 7 chr17 80027515 80027815 -5410665 - AluSx SINE Alu -8 304 1 5347 122 28 17 chr17 80027815 80028343 -5410137 - L1MA9 LINE L1 -60 6252 5708 183 80 0 0 chr17 80028343 80028368 -5410112 + (CA)n Simple_repeat Simple_repeat 2 26 0 5347 122 28 17 chr17 80028368 80028655 -5409825 - L1MA9 LINE L1 -604 5708 5425 1919 172 101 101 chr17 80028655 80029109 -5409371 - L1MB7 LINE L1 -1041 5105 4647 1943 152 30 7 chr17 80029109 80029412 -5409068 - AluJb SINE Alu -2 310 1 1919 172 101 101 chr17 80029412 80029443 -5409037 - L1MB7 LINE L1 -1498 4648 4618 1328 183 55 11 chr17 80029455 80029728 -5408752 - L1MC1 LINE L1 0 6333 6049 2333 110 0 7 chr17 80029792 80030102 -5408378 + AluSx SINE Alu 1 308 -4 23 0 0 0 chr17 80030104 80030127 -5408353 + AT_rich Low_complexity Low_complexity 1 23 0 276 268 84 16 chr17 80030515 80030639 -5407841 + MER5A DNA MER1_type 24 164 -25 195 284 45 23 chr17 80030560 80030648 -5407832 - MER5A DNA MER1_type -74 115 26 * 410 278 50 37 chr17 80031382 80031599 -5406881 - MLT1H LTR MaLR -310 239 22 1895 151 3 13 chr17 80031678 80031982 -5406498 + AluJb SINE Alu 1 301 -11 2452 77 0 3 chr17 80032167 80032478 -5406002 - AluY SINE Alu -1 310 1 1892 141 43 33 chr17 80033103 80033407 -5405073 + AluJb SINE Alu 1 307 -5 2359 91 7 10 chr17 80033407 80033714 -5404766 + AluSc SINE Alu 1 306 -3 343 285 5 70 chr17 80034078 80034264 -5404216 + MER5B DNA MER1_type 5 178 0 2210 76 0 79 chr17 80034841 80035158 -5403322 - AluY SINE Alu -19 292 1 2150 109 4 0 chr17 80035159 80035433 -5403047 - AluSg SINE Alu -35 275 1 624 286 24 29 chr17 80035441 80035631 -5402849 - MIR SINE MIR -39 223 33 2098 179 28 18 chr17 80035631 80036023 -5402457 - MSTD LTR MaLR 0 396 1 624 286 24 29 chr17 80036023 80036042 -5402438 - MIR SINE MIR -229 33 15 2099 87 4 0 chr17 80036353 80036607 -5401873 + AluSp SINE Alu 1 255 -58 416 306 197 0 chr17 80037257 80037440 -5401040 - MIR SINE MIR -40 222 4 249 327 78 44 chr17 80037593 80037700 -5400780 + L3 LINE CR1 1347 1449 -128 2212 104 13 3 chr17 80037700 80037998 -5400482 + AluSx SINE Alu 2 302 -10 249 327 78 44 chr17 80037998 80038095 -5400385 + L3 LINE CR1 1449 1558 -19 2556 80 0 6 chr17 80038203 80038517 -5399963 + AluSq SINE Alu 1 312 -1 2200 118 3 0 chr17 80038586 80038883 -5399597 - AluSq SINE Alu -15 298 1 1547 177 32 29 chr17 80039300 80039610 -5398870 - AluJo SINE Alu -1 311 1 558 218 106 95 chr17 80039880 80040250 -5398230 - MLT1B LTR MaLR 0 626 17 2629 40 0 0 chr17 80040596 80040896 -5397584 + AluY SINE Alu 1 300 -11 2222 113 7 0 chr17 80041634 80041926 -5396554 - AluSx SINE Alu -18 294 1 181 286 0 0 chr17 80043157 80043199 -5395281 - MIR SINE MIR -3 259 218 181 293 0 0 chr17 80043257 80043298 -5395182 - MIR SINE MIR -174 88 48 281 270 62 12 chr17 80043436 80043565 -5394915 - MIR SINE MIR -68 140 5 2376 101 0 0 chr17 80043964 80044260 -5394220 - AluSx SINE Alu -16 296 1 1208 155 104 46 chr17 80044285 80044762 -5393718 - MLT1F1 LTR MaLR 0 567 1 393 160 277 0 chr17 80047307 80047426 -5391054 + MER20 DNA MER1_type 68 219 0 1334 150 142 58 chr17 80048721 80048997 -5389483 - AluJb SINE Alu -15 297 1 209 327 72 37 chr17 80049079 80049280 -5389200 + MIR SINE MIR 47 255 -7 606 112 131 0 chr17 80050891 80050998 -5387482 - THE1B LTR MaLR -49 315 195 418 202 0 50 chr17 80051048 80051147 -5387333 + FLAM_A SINE Alu 47 140 -2 1828 128 30 26 chr17 80051148 80051488 -5386992 + AluSx SINE Alu 1 312 0 26 0 0 0 chr17 80051488 80051514 -5386966 + AT_rich Low_complexity Low_complexity 1 26 0 1744 125 80 14 chr17 80051514 80051855 -5386625 + AluSc SINE Alu 2 309 0 2763 13 0 3 chr17 80052961 80053274 -5385206 - AluYb8 SINE Alu -6 312 1 192 158 0 0 chr17 80053813 80053851 -5384629 + A-rich Low_complexity Low_complexity 1 38 0 2211 83 3 3 chr17 80054579 80054869 -5383611 - AluSp SINE Alu -19 294 5 1174 91 62 108 chr17 80054994 80055235 -5383245 - MER30 DNA MER1_type 0 230 1 377 277 34 34 chr17 80055273 80055392 -5383088 + MER5A DNA MER1_type 70 188 -1 289 215 25 13 chr17 80055487 80055566 -5382914 - MER20 DNA MER1_type -2 217 138 198 0 0 0 chr17 80055566 80055588 -5382892 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 1972 96 0 26 chr17 80055588 80055859 -5382621 - AluSq SINE Alu -34 279 16 215 250 86 95 chr17 80055953 80056069 -5382411 + MIR SINE MIR 72 186 -76 1947 96 75 0 chr17 80056077 80056358 -5382122 + AluSp SINE Alu 1 302 -11 214 281 34 45 chr17 80057562 80057651 -5380829 - MIR SINE MIR -50 212 125 1860 155 6 19 chr17 80058498 80058814 -5379666 - AluJo SINE Alu 0 312 1 2327 84 16 0 chr17 80059109 80059417 -5379063 - AluSp SINE Alu 0 313 1 23 33 0 0 chr17 80059419 80059449 -5379031 + AT_rich Low_complexity Low_complexity 1 30 0 906 251 59 8 chr17 80059716 80059819 -5378661 - MIR SINE MIR 0 262 166 4146 80 13 9 chr17 80059819 80060233 -5378247 + MER41A LTR ERV1 1 419 -135 2253 87 10 0 chr17 80060233 80060532 -5377948 - AluSx SINE Alu -10 302 1 4146 80 13 9 chr17 80060532 80060669 -5377811 + MER41A LTR ERV1 419 554 0 906 251 59 8 chr17 80060669 80060804 -5377676 - MIR SINE MIR -96 166 12 1716 179 0 16 chr17 80061659 80061972 -5376508 + AluJb SINE Alu 1 308 -4 579 308 60 4 chr17 80062140 80062568 -5375912 + MLT1L LTR MaLR 29 527 -88 349 298 11 21 chr17 80062583 80062677 -5375803 - L1MCa LINE L1 -4348 2078 1986 * 404 324 0 48 chr17 80062600 80062690 -5375790 + L1MC4 LINE L1 6614 6696 -1346 2118 143 0 0 chr17 80062690 80062991 -5375489 - AluSq SINE Alu -12 301 1 404 324 0 48 chr17 80062991 80063045 -5375435 + L1MC4 LINE L1 6696 6751 -1291 2379 68 0 16 chr17 80063074 80063382 -5375098 + AluY SINE Alu 1 303 -8 550 361 82 20 chr17 80063546 80063790 -5374690 - MIR SINE MIR -1 261 3 22 0 0 0 chr17 80063982 80064004 -5374476 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr17 80064197 80064228 -5374252 + AT_rich Low_complexity Low_complexity 1 31 0 541 338 38 25 chr17 80064504 80064741 -5373739 + MIR SINE MIR 23 262 0 1558 228 136 75 chr17 80064879 80065014 -5373466 - L1ME2 LINE L1 -15 6218 6093 2282 88 3 3 chr17 80065014 80065310 -5373170 + AluSq SINE Alu 4 299 -14 2280 119 0 0 chr17 80065317 80065629 -5372851 + AluSx SINE Alu 1 312 0 1558 228 136 75 chr17 80065629 80066183 -5372297 - L1ME2 LINE L1 -145 6088 5407 323 45 0 0 chr17 80066183 80066227 -5372253 - AluY SINE Alu -256 44 1 1558 228 136 75 chr17 80066227 80066500 -5371980 - L1ME2 LINE L1 -826 5407 5152 315 260 27 0 chr17 80066519 80066592 -5371888 - L1ME2 LINE L1 -1318 4897 4823 367 247 226 21 chr17 80066602 80066792 -5371688 - L1ME2 LINE L1 -6096 300 72 229 281 0 0 chr17 80066853 80066910 -5371570 - MIR3 SINE MIR -16 192 136 203 197 105 53 chr17 80066983 80067059 -5371421 - MIR SINE MIR -68 140 61 292 316 74 0 chr17 80067096 80067191 -5371289 + L2 LINE L2 3169 3270 -2 572 219 3 3 chr17 80067256 80067580 -5370900 + (TG)n Simple_repeat Simple_repeat 1 324 0 347 219 0 61 chr17 80067580 80067662 -5370818 + L1MCa LINE L1 1994 2070 -4356 648 157 11 7 chr17 80067662 80067942 -5370538 + (TG)n Simple_repeat Simple_repeat 1 281 0 594 280 160 0 chr17 80068626 80068826 -5369654 + MIR SINE MIR 31 262 0 278 26 26 0 chr17 80069100 80069139 -5369341 + (CA)n Simple_repeat Simple_repeat 1 40 0 667 287 72 13 chr17 80069788 80070025 -5368455 - MIR SINE MIR -6 256 6 536 293 80 0 chr17 80071945 80072133 -5366347 + MIR SINE MIR 10 212 -50 286 363 56 23 chr17 80073392 80073592 -5364888 + MIR SINE MIR 17 215 -47 200 343 123 7 chr17 80073661 80073807 -5364673 - MIR SINE MIR -78 184 22 205 238 0 0 chr17 80074623 80074665 -5363815 + G-rich Low_complexity Low_complexity 4 45 0 292 260 69 52 chr17 80076094 80076267 -5362213 - Charlie7 DNA MER1_type -6 2606 2431 219 69 0 0 chr17 80077844 80077873 -5360607 + (CA)n Simple_repeat Simple_repeat 1 29 0 253 148 0 74 chr17 80077891 80077999 -5360481 + (CCCCCG)n Simple_repeat Simple_repeat 5 104 0 212 147 0 0 chr17 80078532 80078566 -5359914 - MIR SINE MIR -116 146 113 345 278 172 0 chr17 80080865 80081016 -5357464 + MIR SINE MIR 37 213 -49 2113 131 0 6 chr17 80081094 80081481 -5356999 + AluSx SINE Alu 1 385 0 1550 153 30 30 chr17 80081524 80081819 -5356661 - AluJo SINE Alu -17 295 1 186 43 0 0 chr17 80081821 80081844 -5356636 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1727 175 7 0 chr17 80081844 80082130 -5356350 - AluJb SINE Alu -24 288 1 2254 101 0 16 chr17 80082736 80083042 -5355438 + AluSx SINE Alu 1 301 -11 212 351 54 34 chr17 80083279 80083484 -5354996 - L2 LINE L2 -414 2900 2692 341 296 98 23 chr17 80086716 80086848 -5351632 - MIR SINE MIR -65 143 9 310 228 51 25 chr17 80087387 80087466 -5351014 + L1MC3 LINE L1 6569 6649 -1136 * 318 218 0 0 chr17 80087413 80087468 -5351012 - L1MC4 LINE L1 -1333 6709 6655 2259 86 3 0 chr17 80089043 80089345 -5349135 + AluSx SINE Alu 1 303 -9 2512 40 0 0 chr17 80089345 80089641 -5348839 + AluY SINE Alu 1 296 -15 2145 98 0 3 chr17 80089806 80090115 -5348365 - AluSq SINE Alu 0 308 1 319 238 12 12 chr17 80090741 80090821 -5347659 + MIR SINE MIR 52 131 -77 225 250 0 40 chr17 80090960 80090991 -5347489 + GA-rich Low_complexity Low_complexity 1 32 -41 2306 79 0 52 chr17 80090991 80091320 -5347160 + AluSx SINE Alu 1 312 0 225 250 0 40 chr17 80091320 80091344 -5347136 + GA-rich Low_complexity Low_complexity 32 55 -18 2397 87 6 0 chr17 80091344 80091655 -5346825 + AluSq SINE Alu 1 313 0 225 250 0 40 chr17 80091655 80091674 -5346806 + GA-rich Low_complexity Low_complexity 55 73 0 870 188 0 0 chr17 80092575 80092724 -5345756 + FRAM SINE Alu 19 167 -9 2108 107 0 3 chr17 80092736 80093034 -5345446 + AluSc SINE Alu 1 297 -12 540 197 78 0 chr17 80093039 80093181 -5345299 + MER96B DNA MER1_type? 265 417 0 972 187 0 0 chr17 80093246 80093412 -5345068 - FRAM SINE Alu 0 166 1 772 113 0 0 chr17 80093620 80093726 -5344754 + AluSq/x SINE Alu 1 106 -206 1596 86 14 9 chr17 80093726 80093978 -5344502 + AluSx SINE Alu 63 315 0 1783 149 0 4 chr17 80094518 80094794 -5343686 - AluJb SINE Alu -36 276 2 2069 128 0 16 chr17 80095345 80095658 -5342822 - AluSx SINE Alu -4 308 1 692 165 0 0 chr17 80095680 80095789 -5342691 - FLAM_A SINE Alu -30 112 4 496 285 220 40 chr17 80095799 80096195 -5342285 - L2 LINE L2 -802 2512 2046 352 305 11 29 chr17 80096223 80096397 -5342083 + G-rich Low_complexity Low_complexity 4 174 0 2098 122 0 3 chr17 80096785 80097088 -5341392 + AluSg SINE Alu 1 302 -8 1757 184 33 33 chr17 80097093 80097458 -5341022 - MLT1A1 LTR MaLR 0 365 1 1242 153 0 0 chr17 80098163 80098339 -5340141 + AluJb SINE Alu 126 301 -11 2277 120 3 0 chr17 80098538 80098837 -5339643 + AluSx SINE Alu 1 300 -12 1923 173 20 0 chr17 80098844 80099150 -5339330 + AluJo SINE Alu 1 312 0 779 233 140 8 chr17 80099150 80099248 -5339232 + MER4D LTR ERV1 636 720 -183 2136 135 3 3 chr17 80099248 80099552 -5338928 + AluSx SINE Alu 1 304 -8 779 233 140 8 chr17 80099552 80099689 -5338791 + MER4D LTR ERV1 720 902 -1 1751 163 17 17 chr17 80099693 80099994 -5338486 - AluJo SINE Alu -11 301 1 2464 83 0 0 chr17 80100069 80100369 -5338111 - AluSg SINE Alu -10 300 1 2050 130 3 0 chr17 80100889 80101174 -5337306 - AluSx SINE Alu 0 312 27 * 2230 120 13 0 chr17 80101172 80101480 -5337000 - AluSp SINE Alu -1 312 1 1704 175 18 7 chr17 80101484 80101769 -5336711 - AluJo SINE Alu -20 292 5 701 235 21 90 chr17 80101797 80102031 -5336449 - MER20 DNA MER1_type -1 218 1 1906 121 28 3 chr17 80102150 80102439 -5336041 + AluSq SINE Alu 5 300 -13 891 177 141 0 chr17 80102475 80102673 -5335807 + MLT1D LTR MaLR 1 226 -279 1826 138 35 14 chr17 80102698 80102981 -5335499 + AluJb SINE Alu 3 291 -21 1348 172 60 14 chr17 80102985 80103270 -5335210 - L1MC1 LINE L1 0 6333 6036 1350 165 48 82 chr17 80103275 80103484 -5334996 - AluJb SINE Alu -7 305 109 2235 107 0 3 chr17 80103484 80103775 -5334705 + AluSg SINE Alu 1 290 -20 1350 165 48 82 chr17 80103775 80103880 -5334600 - AluJb SINE Alu -203 109 2 2015 167 3 0 chr17 80103884 80104190 -5334290 - AluJb SINE Alu -1 311 5 243 274 197 17 chr17 80104790 80104907 -5333573 + MIR3 SINE MIR 44 181 -27 1950 143 0 14 chr17 80104922 80105202 -5333278 + AluJo SINE Alu 1 276 -36 2212 71 0 11 chr17 80105202 80105470 -5333010 + AluSg SINE Alu 28 292 -18 471 141 37 30 chr17 80105470 80105605 -5332875 + GA-rich Low_complexity Low_complexity 1 136 0 2312 96 7 0 chr17 80105618 80105921 -5332559 + AluSp SINE Alu 1 305 -8 2359 96 0 0 chr17 80106809 80107102 -5331378 + AluSx SINE Alu 1 293 -19 1275 200 3 97 chr17 80107298 80107400 -5331080 - AluJb SINE Alu 0 312 202 2069 125 189 0 chr17 80107400 80107760 -5330720 - MSTA LTR MaLR 0 428 1 1275 200 3 97 chr17 80107760 80107851 -5330629 - AluJb SINE Alu -110 202 160 405 0 0 0 chr17 80107851 80107896 -5330584 + (TA)n Simple_repeat Simple_repeat 2 46 0 1275 200 3 97 chr17 80107896 80108031 -5330449 - AluJb SINE Alu -152 160 14 522 128 103 0 chr17 80108294 80108372 -5330108 - AluS SINE Alu -226 87 2 1266 126 8 54 chr17 80108384 80108623 -5329857 + MER41B LTR ERV1 3 230 -405 2170 116 0 23 chr17 80108623 80108926 -5329554 + AluSx SINE Alu 1 296 -16 588 160 0 0 chr17 80108929 80109023 -5329457 - MER2 DNA MER2_type -209 136 43 1822 74 0 49 chr17 80109144 80109388 -5329092 - AluY SINE Alu -79 232 1 320 352 50 11 chr17 80109515 80109697 -5328783 + L2 LINE L2 2866 3054 -218 519 221 101 25 chr17 80109885 80110043 -5328437 - MER21B LTR ERV1 -56 807 638 444 149 0 0 chr17 80110044 80110111 -5328369 - MER41B LTR ERV1 -2 633 567 1224 103 41 77 chr17 80110114 80110309 -5328171 + AluSx SINE Alu 1 188 -124 2245 118 0 10 chr17 80110311 80110624 -5327856 + AluSg SINE Alu 1 310 0 2605 159 13 55 chr17 80110624 80111170 -5327310 - MER41B LTR ERV1 -112 523 1 901 240 54 60 chr17 80111170 80111314 -5327166 - MER21B LTR ERV1 -221 642 499 2089 128 0 14 chr17 80111314 80111611 -5326869 - AluJo SINE Alu -19 293 1 901 240 54 60 chr17 80111611 80111782 -5326698 - MER21B LTR ERV1 -364 499 329 708 203 53 102 chr17 80111829 80112075 -5326405 - MER21B LTR ERV1 -629 234 1 2343 98 7 0 chr17 80112169 80112474 -5326006 + AluSp SINE Alu 1 307 -6 2068 127 3 0 chr17 80112554 80112837 -5325643 - AluSx SINE Alu -28 284 1 1526 127 151 8 chr17 80112837 80113096 -5325384 - AluSx SINE Alu -16 296 1 2228 125 3 0 chr17 80113366 80113677 -5324803 - AluSx SINE Alu 0 312 1 2093 144 3 0 chr17 80114217 80114522 -5323958 + AluSx SINE Alu 1 306 -6 1539 158 105 11 chr17 80114532 80114817 -5323663 + AluSx SINE Alu 1 312 0 2298 107 7 0 chr17 80114867 80115166 -5323314 - AluSx SINE Alu -11 301 1 1266 126 8 54 chr17 80115166 80115405 -5323075 - MER41B LTR ERV1 -405 230 3 1897 147 30 10 chr17 80115416 80115715 -5322765 + AluSx SINE Alu 1 305 -7 1067 230 98 3 chr17 80115731 80116018 -5322462 + L1M4 LINE L1 5485 5798 -386 1303 122 6 0 chr17 80116019 80116191 -5322289 + AluSx SINE Alu 1 173 -139 924 179 0 6 chr17 80116192 80116360 -5322120 + HUERS-P1 LTR ERV1 6089 6255 -8 1869 90 4 0 chr17 80116360 80116605 -5321875 + AluY SINE Alu 64 309 -2 4574 121 8 24 chr17 80116630 80117332 -5321148 + LTR8 LTR ERV1 1 691 0 972 149 7 7 chr17 80117332 80117480 -5321000 - AluJo SINE Alu -164 148 1 29 28 0 0 chr17 80117497 80117533 -5320947 + AT_rich Low_complexity Low_complexity 1 36 0 697 158 7 62 chr17 80117538 80117576 -5320904 + MER41D LTR ERV1 420 459 -98 2214 119 0 7 chr17 80117576 80117879 -5320601 - AluSg SINE Alu -9 301 1 697 158 7 62 chr17 80117879 80117986 -5320494 + MER41D LTR ERV1 459 557 0 2363 109 0 3 chr17 80118418 80118729 -5319751 - AluSq SINE Alu -3 310 1 306 48 32 81 chr17 80118729 80118791 -5319689 - AluSx SINE Alu 0 302 244 1205 136 0 6 chr17 80118791 80118960 -5319520 - AluSx SINE Alu -144 168 1 2280 89 7 0 chr17 80119050 80119341 -5319139 - AluSp SINE Alu -20 293 1 7291 129 149 47 chr17 80119366 80120907 -5317573 + pTR5 LTR ERV1 741 2438 0 212 324 134 7 chr17 80121132 80121274 -5317206 - MIR SINE MIR -42 220 61 1183 195 48 40 chr17 80121400 80121490 -5316990 + MER49 LTR ERV1 1 89 -834 2084 130 7 0 chr17 80121490 80121782 -5316698 + AluSx SINE Alu 1 294 -18 1183 195 48 40 chr17 80121782 80121963 -5316517 + MER49 LTR ERV1 89 274 -649 1942 155 0 10 chr17 80122066 80122382 -5316098 - AluSx SINE Alu 0 313 1 353 243 0 0 chr17 80122382 80122452 -5316028 + LTR39 LTR ERV1 411 480 -303 239 118 0 0 chr17 80122453 80122487 -5315993 + Alu SINE Alu 1 34 -99 985 152 0 0 chr17 80122588 80122726 -5315754 - AluSg/x SINE Alu -41 271 134 2369 72 24 3 chr17 80122726 80123018 -5315462 - AluSx SINE Alu -14 298 1 1958 187 21 64 chr17 80123049 80123374 -5315106 - MLT1D LTR MaLR 0 505 209 7861 81 18 15 chr17 80123374 80124442 -5314038 + MER11C LTR ERVK 1 1071 0 1958 187 21 64 chr17 80124442 80124630 -5313850 - MLT1D LTR MaLR -296 209 14 477 255 5 116 chr17 80124630 80124802 -5313678 + MIR SINE MIR 67 212 -50 2223 126 0 0 chr17 80124802 80125095 -5313385 + AluSx SINE Alu 3 295 -17 477 255 5 116 chr17 80125095 80125138 -5313342 + MIR SINE MIR 212 258 -4 212 175 0 0 chr17 80125355 80125395 -5313085 + A-rich Low_complexity Low_complexity 1 40 0 2177 82 57 3 chr17 80126261 80126543 -5311937 - AluSc SINE Alu -12 297 1 2369 105 0 3 chr17 80126946 80127251 -5311229 + AluSp SINE Alu 1 304 -9 1689 173 40 28 chr17 80127455 80127808 -5310672 - MLT1A2 LTR MaLR -17 357 1 2563 57 0 22 chr17 80128267 80128583 -5309897 - AluY SINE Alu -2 309 1 1282 221 100 117 chr17 80128741 80129180 -5309300 - MER21B LTR ERV1 -126 737 313 785 117 108 0 chr17 80129180 80129300 -5309180 + FLAM_C SINE Alu 1 133 0 1282 221 100 117 chr17 80129300 80129597 -5308883 - MER21B LTR ERV1 -550 313 13 412 263 60 115 chr17 80129616 80129833 -5308647 - L2 LINE L2 0 3313 3109 265 223 0 180 chr17 80129811 80129950 -5308530 + L2 LINE L2 3198 3311 -2 * 312 286 197 15 chr17 80129964 80130223 -5308257 - L2 LINE L2 -796 2518 2213 197 331 126 47 chr17 80130248 80130375 -5308105 - L3 LINE CR1 -64 1513 1377 1666 143 89 27 chr17 80130384 80130677 -5307803 + AluJb SINE Alu 1 311 -1 2289 110 0 3 chr17 80130759 80131060 -5307420 - AluSg SINE Alu -10 300 1 1484 279 62 4 chr17 80131061 80131541 -5306939 - L1MEc LINE L1 -5643 753 246 1254 154 72 34 chr17 80131553 80131846 -5306634 - L1MC/D LINE L1 -651 5591 5288 2328 81 7 10 chr17 80131853 80132148 -5306332 - AluSc SINE Alu -14 295 2 2222 129 0 10 chr17 80132159 80132469 -5306011 - AluSx SINE Alu -5 307 1 840 154 0 22 chr17 80132496 80132632 -5305848 - FLAM_C SINE Alu 0 133 1 870 171 85 6 chr17 80133935 80134111 -5304369 + MER46A DNA MER2_type 47 236 0 2109 123 0 3 chr17 80134202 80134517 -5303963 - AluSx SINE Alu 0 312 6 2137 119 6 38 chr17 80134877 80135196 -5303284 - AluSx SINE Alu -3 309 1 1425 144 116 53 chr17 80135198 80135236 -5303244 - AluSg SINE Alu -7 303 269 2397 71 0 3 chr17 80135236 80135531 -5302949 + AluY SINE Alu 8 301 -10 1425 144 116 53 chr17 80135531 80135777 -5302703 - AluSg SINE Alu -41 269 1 192 200 0 0 chr17 80135785 80135835 -5302645 + T-rich Low_complexity Low_complexity 1 50 0 777 168 36 0 chr17 80136079 80136216 -5302264 - FLAM_C SINE Alu 0 143 2 977 177 0 0 chr17 80137054 80137212 -5301268 + FRAM SINE Alu 1 157 -19 2389 115 0 3 chr17 80137214 80137528 -5300952 + AluSq SINE Alu 1 313 0 25 51 0 0 chr17 80137528 80137567 -5300913 + AT_rich Low_complexity Low_complexity 1 39 0 2258 99 0 14 chr17 80137709 80138028 -5300452 - AluSx SINE Alu 0 312 1 808 190 153 5 chr17 80138337 80138553 -5299927 - L1MB7 LINE L1 -19 6165 5918 813 136 0 61 chr17 80138564 80138711 -5299769 - FLAM_C SINE Alu 0 143 6 2449 85 0 0 chr17 80138761 80139056 -5299424 - AluSg SINE Alu -14 296 2 1033 214 103 101 chr17 80139204 80139709 -5298771 - MLT1E LTR MaLR 0 593 62 1671 193 11 7 chr17 80140072 80140357 -5298123 - AluJb SINE Alu -20 292 7 2451 93 3 0 chr17 80140414 80140716 -5297764 - AluSp SINE Alu -8 305 3 2356 91 0 7 chr17 80140718 80141016 -5297464 - AluSg SINE Alu -8 302 7 1945 103 4 4 chr17 80141140 80141393 -5297087 + AluSg SINE Alu 1 253 -57 2258 100 0 17 chr17 80141808 80142107 -5296373 - AluSq SINE Alu -19 294 1 1776 161 33 25 chr17 80142172 80142497 -5295983 + L1M3 LINE L1 5448 5778 -405 2426 92 3 0 chr17 80142497 80142801 -5295679 + AluSc SINE Alu 1 305 -4 1776 161 33 25 chr17 80142801 80142842 -5295638 + L1M3 LINE L1 5778 5817 -366 2154 139 0 13 chr17 80142856 80143165 -5295315 + AluSx SINE Alu 1 305 -7 2695 145 71 23 chr17 80143169 80143573 -5294907 + L1MB3 LINE L1 5588 6028 -155 1962 155 3 10 chr17 80143573 80143882 -5294598 - AluJo SINE Alu -5 307 1 2695 145 71 23 chr17 80143882 80144041 -5294439 + L1MB3 LINE L1 6028 6178 -5 1999 131 21 0 chr17 80144042 80144325 -5294155 + AluSx SINE Alu 1 289 -23 2348 91 14 0 chr17 80144500 80144796 -5293684 - AluSx SINE Alu -12 300 1 964 243 68 38 chr17 80144797 80145167 -5293313 - MER68 LTR ERV1 -16 546 166 1470 100 10 5 chr17 80145167 80145367 -5293113 - AluSg/x SINE Alu -9 303 103 2567 68 0 3 chr17 80145484 80145791 -5292689 - AluSq SINE Alu -7 306 1 1499 175 25 21 chr17 80146025 80146350 -5292130 + MER4D LTR ERV1 1 326 -546 1841 140 0 90 chr17 80146353 80146696 -5291784 - AluSx SINE Alu 0 312 1 1513 123 0 0 chr17 80146715 80146919 -5291561 - AluSg/x SINE Alu -7 305 102 1814 92 72 12 chr17 80146940 80147191 -5291289 + AluSg SINE Alu 17 282 -28 2408 100 0 0 chr17 80147217 80147517 -5290963 + AluSx SINE Alu 4 303 -9 3459 153 21 4 chr17 80147517 80148080 -5290400 - MER50 LTR ERV1 -161 573 1 1003 151 70 0 chr17 80148080 80148255 -5290225 + MER4D LTR ERV1 716 903 0 1750 113 59 8 chr17 80148425 80148681 -5289799 - AluSx SINE Alu -1 311 43 1820 145 85 0 chr17 80148690 80148972 -5289508 - AluSx SINE Alu -6 306 1 1795 209 159 11 chr17 80149081 80149541 -5288939 - L1PA15-16 LINE L1 -5352 1497 970 320 0 25 0 chr17 80150397 80150437 -5288043 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 7543 56 0 2 chr17 80151819 80152995 -5285485 - L1P2 LINE L1 -582 5572 4400 616 175 0 3 chr17 80153108 80153237 -5285243 - MSTA LTR MaLR -299 127 1 230 300 0 0 chr17 80153239 80153299 -5285181 - AluJ/FLAM SINE Alu -225 77 18 393 39 0 0 chr17 80153324 80153375 -5285105 + (TA)n Simple_repeat Simple_repeat 1 51 0 739 196 0 0 chr17 80153390 80153523 -5284957 - FLAM_C SINE Alu 0 133 1 1529 186 59 72 chr17 80153729 80153975 -5284505 + MLT1C LTR MaLR 1 240 -227 2253 141 0 0 chr17 80153975 80154280 -5284200 + AluSx SINE Alu 1 305 -7 1529 186 59 72 chr17 80154280 80154505 -5283975 + MLT1C LTR MaLR 240 466 -1 233 315 110 20 chr17 80155888 80156034 -5282446 + MIR SINE MIR 28 186 -76 2222 142 0 0 chr17 80156207 80156517 -5281963 - AluSx SINE Alu -2 310 1 2215 85 0 51 chr17 80156521 80156839 -5281641 - AluSg1 SINE Alu 0 303 1 2472 93 0 3 chr17 80156853 80157166 -5281314 - AluSx SINE Alu 0 312 1 2135 121 3 20 chr17 80157821 80158127 -5280353 - AluJb SINE Alu -11 301 1 1109 226 5 9 chr17 80158174 80158395 -5280085 - AluJo SINE Alu -92 220 1 288 307 14 7 chr17 80158439 80158516 -5279964 + (CA)n Simple_repeat Simple_repeat 1 81 -60 2498 80 0 3 chr17 80158516 80158816 -5279664 - AluSx SINE Alu -13 299 1 288 307 14 7 chr17 80158816 80158878 -5279602 + (CA)n Simple_repeat Simple_repeat 81 141 0 711 264 87 46 chr17 80159305 80159367 -5279113 - MLT1C LTR MaLR -1 466 408 2429 90 0 0 chr17 80159367 80159668 -5278812 - AluY SINE Alu -10 301 1 711 264 87 46 chr17 80159668 80159925 -5278555 - MLT1C LTR MaLR -59 408 149 2266 76 45 3 chr17 80159925 80160213 -5278267 + AluSp SINE Alu 1 300 -13 711 264 87 46 chr17 80160213 80160369 -5278111 - MLT1C LTR MaLR -318 149 1 2300 96 0 13 chr17 80160557 80160859 -5277621 - AluSx SINE Alu -14 298 1 194 320 68 29 chr17 80161185 80161288 -5277192 + MIR SINE MIR 32 138 -70 1760 156 0 7 chr17 80162455 80162724 -5275756 - AluJb SINE Alu -11 301 35 192 152 0 0 chr17 80162804 80162837 -5275643 + (CATGC)n Simple_repeat Simple_repeat 3 35 0 2502 91 0 0 chr17 80163023 80163330 -5275150 - AluSg SINE Alu -3 307 1 1954 149 0 40 chr17 80163850 80164171 -5274309 + AluJb SINE Alu 1 308 -4 931 185 6 12 chr17 80164258 80164431 -5274049 + AluJb SINE Alu 122 293 -19 2370 92 13 0 chr17 80164431 80164734 -5273746 + AluSx SINE Alu 1 307 -5 1156 254 100 53 chr17 80164902 80165279 -5273201 - MLT1F1 LTR MaLR 0 567 156 2135 139 0 0 chr17 80165279 80165581 -5272899 - AluJb SINE Alu -4 308 7 1156 254 100 53 chr17 80165581 80165736 -5272744 - MLT1F1 LTR MaLR -411 156 10 2048 100 50 0 chr17 80165811 80166091 -5272389 - AluSx SINE Alu -18 294 1 2336 87 0 16 chr17 80166625 80166936 -5271544 - AluY SINE Alu -1 310 5 2010 176 33 25 chr17 80167028 80167575 -5270905 - MLT2A2 LTR ERVL 0 554 2 2406 89 0 0 chr17 80167748 80168039 -5270441 + AluSx SINE Alu 1 291 -21 270 271 62 31 chr17 80168105 80168201 -5270279 + MIR SINE MIR 119 217 -45 1395 224 30 19 chr17 80168784 80169154 -5269326 + MLT1A2 LTR MaLR 1 374 0 2111 120 10 10 chr17 80170331 80170632 -5267848 - AluSx SINE Alu -11 301 1 1239 186 35 51 chr17 80170653 80170754 -5267726 + Charlie1 DNA MER1_type 2396 2497 -264 2100 138 0 0 chr17 80170754 80171044 -5267436 - AluSx SINE Alu -20 292 3 1239 186 35 51 chr17 80171044 80171314 -5267166 + Charlie1 DNA MER1_type 2497 2761 0 2141 104 31 3 chr17 80171476 80171765 -5266715 + AluSx SINE Alu 1 297 -15 2540 54 3 0 chr17 80171839 80172133 -5266347 + AluY SINE Alu 1 295 -16 742 183 8 0 chr17 80172443 80172569 -5265911 + FLAM_A SINE Alu 1 127 -6 773 151 60 45 chr17 80172571 80172715 -5265765 + MLT1B LTR MaLR 29 178 -212 2491 94 0 0 chr17 80172715 80173024 -5265456 + AluSx SINE Alu 1 309 -3 773 151 60 45 chr17 80173024 80173078 -5265402 + MLT1B LTR MaLR 178 230 -160 2063 125 30 0 chr17 80173596 80173891 -5264589 - AluSg SINE Alu -6 304 1 1286 184 120 11 chr17 80174129 80174395 -5264085 - AluSg1 SINE Alu -14 295 1 643 175 98 77 chr17 80174395 80174500 -5263980 + MER3 DNA MER1_type 10 122 -87 2296 103 6 13 chr17 80174500 80174812 -5263668 - AluSx SINE Alu -2 310 1 643 175 98 77 chr17 80174812 80174900 -5263580 + MER3 DNA MER1_type 122 207 -2 212 298 247 7 chr17 80174920 80175357 -5263123 + L2 LINE L2 2192 2733 -581 215 321 161 0 chr17 80175464 80175601 -5262879 + L2 LINE L2 2927 3085 -228 261 266 0 0 chr17 80175739 80175833 -5262647 + CT-rich Low_complexity Low_complexity 3 96 0 563 200 0 7 chr17 80175946 80176096 -5262384 + CT-rich Low_complexity Low_complexity 1 149 0 1101 186 113 67 chr17 80176964 80177070 -5261410 + MLT1B LTR MaLR 3 103 -287 1973 110 60 7 chr17 80177070 80177351 -5261129 + AluSg SINE Alu 1 296 -14 2334 88 10 0 chr17 80177361 80177656 -5260824 + AluSq SINE Alu 1 298 -15 1101 186 113 67 chr17 80177656 80177830 -5260650 + MLT1B LTR MaLR 111 315 -75 1850 164 0 32 chr17 80177830 80177943 -5260537 + AluJb SINE Alu 2 117 -195 2241 107 13 0 chr17 80177943 80178241 -5260239 - AluSx SINE Alu -10 302 1 1850 164 0 32 chr17 80178241 80178437 -5260043 + AluJb SINE Alu 117 301 -11 1101 186 113 67 chr17 80178437 80178488 -5259992 + MLT1B LTR MaLR 315 362 -28 1110 235 58 50 chr17 80179778 80179972 -5258508 - MER68 LTR ERV1 -173 389 189 1824 164 22 19 chr17 80179972 80180283 -5258197 + AluJo SINE Alu 1 312 0 1110 235 58 50 chr17 80180283 80180450 -5258030 - MER68 LTR ERV1 -373 189 25 2380 98 3 3 chr17 80180693 80180998 -5257482 - AluSq SINE Alu -8 305 1 1829 170 7 3 chr17 80181405 80181694 -5256786 - AluJo SINE Alu -10 302 13 352 252 7 7 chr17 80181723 80181874 -5256606 + GA-rich Low_complexity Low_complexity 2 152 0 2188 162 45 32 chr17 80181887 80182062 -5256418 + L1MB5 LINE L1 5699 5870 -304 1736 180 10 23 chr17 80182062 80182367 -5256113 + AluJb SINE Alu 1 301 -11 2188 162 45 32 chr17 80182367 80182599 -5255881 + L1MB5 LINE L1 5870 6115 -59 2166 116 7 3 chr17 80182599 80182902 -5255578 - AluSx SINE Alu -8 304 1 2188 162 45 32 chr17 80182902 80182957 -5255523 + L1MB5 LINE L1 6115 6168 -6 2146 103 43 0 chr17 80183723 80184005 -5254475 - AluSx SINE Alu -18 294 1 1691 170 38 21 chr17 80184033 80184322 -5254158 - AluJo SINE Alu -18 294 1 272 317 24 16 chr17 80184335 80184458 -5254022 - MIR SINE MIR -120 142 19 672 58 0 0 chr17 80184483 80184570 -5253910 - AluSg/x SINE Alu -11 299 213 1052 265 36 34 chr17 80184604 80184962 -5253518 + MLT1A1 LTR MaLR 2 360 -5 214 294 0 24 chr17 80185520 80185605 -5252875 + (GGGTG)n Simple_repeat Simple_repeat 4 86 0 2297 90 0 48 chr17 80185638 80185774 -5252706 + AluSx SINE Alu 1 142 -170 2534 90 0 0 chr17 80185774 80186086 -5252394 + AluSx SINE Alu 1 312 0 2297 90 0 48 chr17 80186086 80186261 -5252219 + AluSx SINE Alu 142 297 -15 341 218 90 0 chr17 80186827 80186905 -5251575 + MIR SINE MIR 21 105 -157 1587 152 39 69 chr17 80186924 80187057 -5251423 - L1MB7 LINE L1 -19 6165 6029 2351 98 8 48 chr17 80187057 80187272 -5251208 - THE1B LTR MaLR 0 364 169 1894 137 65 7 chr17 80187272 80187564 -5250916 + AluSq SINE Alu 1 309 -4 2351 98 8 48 chr17 80187564 80187725 -5250755 - THE1B LTR MaLR -195 169 3 1587 152 39 69 chr17 80187725 80187952 -5250528 - L1MB7 LINE L1 -155 6029 5816 1748 121 117 7 chr17 80188001 80188274 -5250206 - AluJo SINE Alu -9 303 1 2093 141 0 0 chr17 80188283 80188582 -5249898 - AluSq SINE Alu -14 299 1 2620 168 12 70 chr17 80188583 80188690 -5249790 - L1MB3 LINE L1 -41 6142 6030 1661 162 47 24 chr17 80188690 80188955 -5249525 + AluJo SINE Alu 1 275 -37 189 0 0 0 chr17 80188955 80188976 -5249504 + (GA)n Simple_repeat Simple_repeat 2 22 0 1661 162 47 24 chr17 80188976 80189007 -5249473 + AluJo SINE Alu 275 304 -8 2620 168 12 70 chr17 80189007 80189231 -5249249 - L1MB3 LINE L1 -153 6030 5795 2067 108 0 49 chr17 80189231 80189538 -5248942 - AluSx SINE Alu -18 294 3 2620 168 12 70 chr17 80189538 80189553 -5248927 - L1MB3 LINE L1 -388 5795 5781 2293 111 0 3 chr17 80189553 80189850 -5248630 - AluSg SINE Alu -14 296 1 2620 168 12 70 chr17 80189850 80190090 -5248390 - L1MB3 LINE L1 -402 5781 5588 839 205 0 74 chr17 80190092 80190211 -5248269 - L1MB7 LINE L1 -361 5823 5725 2376 78 10 0 chr17 80190211 80190507 -5247973 + AluSp SINE Alu 1 299 -14 839 205 0 74 chr17 80190507 80190602 -5247878 - L1MB7 LINE L1 -459 5725 5625 201 192 135 0 chr17 80190847 80190899 -5247581 - MIR SINE MIR -62 146 88 317 265 103 22 chr17 80192136 80192272 -5246208 + MIR SINE MIR 2 148 -114 544 172 71 0 chr17 80192338 80192437 -5246043 - MLT1D LTR MaLR 0 505 400 2230 79 52 0 chr17 80192470 80192761 -5245719 + AluY SINE Alu 1 306 -5 3003 104 106 64 chr17 80192766 80193069 -5245411 + MER4B LTR ERV1 10 299 -311 2213 134 0 3 chr17 80193069 80193382 -5245098 - AluSx SINE Alu 0 312 1 3003 104 106 64 chr17 80193382 80193655 -5244825 + MER4B LTR ERV1 299 610 0 834 211 54 40 chr17 80193657 80193878 -5244602 - MLT1D LTR MaLR -115 390 167 474 217 73 77 chr17 80193878 80194100 -5244380 - LTR48 LTR ERV1 0 787 418 862 390 0 539 chr17 80194165 80194355 -5244125 - LTR48 LTR ERV1 -406 238 115 990 219 130 0 chr17 80194355 80194457 -5244023 - MER2 DNA MER2_type -4 340 253 1923 97 97 8 chr17 80194457 80194724 -5243756 + AluSg SINE Alu 1 291 -19 990 219 130 0 chr17 80194724 80194922 -5243558 - MER2 DNA MER2_type -91 253 1 862 390 0 539 chr17 80194922 80194976 -5243504 - LTR48 LTR ERV1 -529 115 1 812 266 47 44 chr17 80195152 80195471 -5243009 + MER87 LTR ERV1 199 518 -23 364 254 149 8 chr17 80195492 80195525 -5242955 - MLT1D LTR MaLR -473 153 126 2373 91 10 0 chr17 80195525 80195821 -5242659 - AluSp SINE Alu -14 299 1 364 254 149 8 chr17 80195821 80195921 -5242559 - MLT1D LTR MaLR -500 126 1 1951 123 153 5 chr17 80195978 80196351 -5242129 - MSTA LTR MaLR 0 428 1 2073 152 13 16 chr17 80196460 80196836 -5241644 - THE1C LTR MaLR 0 375 1 379 250 186 7 chr17 80197743 80197883 -5240597 + Charlie8 DNA MER1_type 37 201 -2216 1118 250 92 9 chr17 80197961 80198309 -5240171 + MLT1C LTR MaLR 6 382 -85 817 165 0 0 chr17 80198309 80198442 -5240038 + FRAM SINE Alu 38 170 -6 1776 94 120 7 chr17 80198893 80199168 -5239312 - AluSg1 SINE Alu -3 306 1 * 2223 108 0 3 chr17 80199168 80199473 -5239007 - AluSg SINE Alu -6 304 1 1698 169 3 13 chr17 80199612 80199919 -5238561 - AluJo SINE Alu -8 304 1 252 318 196 7 chr17 80200037 80200185 -5238295 + MER5B DNA MER1_type 1 176 -2 913 228 115 39 chr17 80200210 80200592 -5237888 - LTR16C LTR ERVL -2 489 79 445 296 99 0 chr17 80200679 80200841 -5237639 - MIR SINE MIR -1 261 84 2035 104 3 64 chr17 80201003 80201331 -5237149 + AluSx SINE Alu 1 308 -4 268 274 170 15 chr17 80202417 80202552 -5235928 - MIR3 SINE MIR -4 204 49 200 189 27 40 chr17 80203143 80203217 -5235263 + (CGCGG)n Simple_repeat Simple_repeat 5 77 0 21 71 0 0 chr17 80203403 80203445 -5235035 + GC_rich Low_complexity Low_complexity 1 42 0 202 200 11 78 chr17 80204291 80204381 -5234099 + G-rich Low_complexity Low_complexity 3 86 0 21 0 0 0 chr17 80204620 80204641 -5233839 + GC_rich Low_complexity Low_complexity 1 21 0 278 321 38 0 chr17 80206516 80206622 -5231858 + L2 LINE L2 3203 3312 -1 777 190 50 6 chr17 80206955 80207134 -5231346 - MER5A DNA MER1_type 0 189 3 233 319 66 84 chr17 80208016 80208182 -5230298 + MIR SINE MIR 4 166 -42 350 348 44 13 chr17 80208721 80208879 -5229601 + MIR SINE MIR 90 252 -10 204 254 0 0 chr17 80209502 80209561 -5228919 + (TG)n Simple_repeat Simple_repeat 1 59 0 1436 200 35 56 chr17 80209586 80209776 -5228704 - L1ME3A LINE L1 -71 6099 5907 2746 104 0 5 chr17 80209776 80210151 -5228329 + THE1C LTR MaLR 1 373 -2 1436 200 35 56 chr17 80210151 80210439 -5228041 - L1ME3A LINE L1 -263 5907 5631 2260 88 3 16 chr17 80211627 80211935 -5226545 + AluSx SINE Alu 1 304 -8 1838 177 0 0 chr17 80213059 80213358 -5225122 - AluJo SINE Alu -13 299 1 455 263 97 16 chr17 80213430 80213616 -5224864 - MIR3 SINE MIR -4 204 4 245 355 47 19 chr17 80214106 80214213 -5224267 - MER91C DNA MER1_type 0 140 31 212 298 48 12 chr17 80215199 80215283 -5223197 - MIR SINE MIR -111 151 65 622 244 99 21 chr17 80215284 80215526 -5222954 + LTR16C LTR ERVL 231 491 0 360 346 28 17 chr17 80216115 80216294 -5222186 - MER5A DNA MER1_type -4 185 5 351 269 121 40 chr17 80216406 80216555 -5221925 - MIR3 SINE MIR -36 172 12 1827 136 4 14 chr17 80217289 80217569 -5220911 - AluSg SINE Alu -10 300 24 23 0 0 29 chr17 80217577 80217596 -5220884 + AT_rich Low_complexity Low_complexity 1 20 -13 1898 97 36 11 chr17 80217596 80217875 -5220605 - AluSx SINE Alu -21 291 6 23 0 0 29 chr17 80217875 80217889 -5220591 + AT_rich Low_complexity Low_complexity 20 33 0 566 286 8 0 chr17 80218803 80218936 -5219544 - MIR SINE MIR -121 141 8 1909 111 0 31 chr17 80218997 80219178 -5219302 - AluSx SINE Alu 0 309 140 2345 81 0 3 chr17 80219178 80219475 -5219005 - AluSc SINE Alu -13 296 1 1909 111 0 31 chr17 80219475 80219609 -5218871 - AluSx SINE Alu -169 140 3 338 247 0 12 chr17 80219616 80219697 -5218783 - L2 LINE L2 -601 2713 2634 376 299 216 49 chr17 80221307 80221333 -5217147 + L2 LINE L2 2196 2216 -1098 2272 115 0 0 chr17 80221333 80221645 -5216835 + AluSx SINE Alu 1 312 0 376 299 216 49 chr17 80221645 80222017 -5216463 + L2 LINE L2 2216 2524 -790 798 67 0 0 chr17 80222017 80222122 -5216358 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 2151 113 6 10 chr17 80222122 80222433 -5216047 - AluSx SINE Alu -2 310 1 376 299 216 49 chr17 80222433 80222600 -5215880 + L2 LINE L2 2523 2858 -456 281 27 0 0 chr17 80223387 80223424 -5215056 + tRNA-Gly-GGA tRNA tRNA 1 37 -38 197 222 0 0 chr17 80223781 80223817 -5214663 + MIR SINE MIR 76 111 -97 182 134 0 60 chr17 80224202 80224269 -5214211 + (TAA)n Simple_repeat Simple_repeat 1 63 0 222 402 0 0 chr17 80224796 80224878 -5213602 - L3 LINE CR1 -109 1468 1387 1696 184 13 84 chr17 80225016 80225079 -5213401 - MLT1A1 LTR MaLR -2 363 297 1874 170 3 0 chr17 80225079 80225379 -5213101 - AluJb SINE Alu -11 301 1 1696 184 13 84 chr17 80225379 80225538 -5212942 - MLT1A1 LTR MaLR -68 297 128 2184 120 0 0 chr17 80225538 80225839 -5212641 - AluSx SINE Alu -11 301 1 1696 184 13 84 chr17 80225839 80225947 -5212533 - MLT1A1 LTR MaLR -237 128 62 2061 124 3 3 chr17 80225947 80226254 -5212226 - AluSx SINE Alu -5 307 1 1696 184 13 84 chr17 80226254 80226312 -5212168 - MLT1A1 LTR MaLR -303 62 1 218 184 0 0 chr17 80226369 80226407 -5212073 - MIR SINE MIR -62 146 109 1983 134 0 3 chr17 80226630 80226922 -5211558 - AluSx SINE Alu -21 291 1 1804 229 96 13 chr17 80227098 80227649 -5210831 - MER77 LTR ERV1 -7 598 2 181 374 66 0 chr17 80227803 80227894 -5210586 + L2 LINE L2 3163 3259 -13 595 246 123 28 chr17 80228816 80229027 -5209453 + MIR SINE MIR 28 258 -4 2144 113 7 7 chr17 80229147 80229456 -5209024 + AluSg1 SINE Alu 1 309 0 3056 125 39 16 chr17 80229530 80230042 -5208438 + MER1A DNA MER1_type 6 529 0 1082 214 3 37 chr17 80230042 80230406 -5208074 - MLT1C LTR MaLR -48 342 1 664 185 25 13 chr17 80230418 80230575 -5207905 + ORSL DNA AcHobo 117 275 0 499 289 159 10 chr17 80231098 80231306 -5207174 - MIR SINE MIR -4 258 20 1802 178 10 3 chr17 80231486 80231790 -5206690 - AluJb SINE Alu -6 306 1 1451 210 49 15 chr17 80231849 80232240 -5206240 - MLT1C LTR MaLR 0 467 64 381 93 0 0 chr17 80232240 80232294 -5206186 + (TTTC)n Simple_repeat Simple_repeat 2 55 0 2293 92 0 0 chr17 80232319 80232612 -5205868 + AluSq SINE Alu 1 293 -20 657 255 59 68 chr17 80232613 80232869 -5205611 - L1ME3 LINE L1 -4 6158 5904 2019 62 102 0 chr17 80232869 80233144 -5205336 - AluSx SINE Alu -9 303 1 657 255 59 68 chr17 80233144 80233224 -5205256 - L1ME3 LINE L1 -258 5904 5825 1067 84 0 0 chr17 80233230 80233373 -5205107 - L1PB1 LINE L1 0 6151 6009 1625 139 34 41 chr17 80233903 80234181 -5204299 + AluJb SINE Alu 1 278 -34 186 43 0 0 chr17 80234181 80234204 -5204276 + (TC)n Simple_repeat Simple_repeat 2 24 0 1625 139 34 41 chr17 80234204 80234219 -5204261 + AluJb SINE Alu 278 292 -20 234 227 121 0 chr17 80234352 80234418 -5204062 + MER106A DNA MER1_type 1 74 -162 365 283 131 14 chr17 80234553 80234698 -5203782 - MIR SINE MIR -37 225 64 1698 265 35 4 chr17 80234853 80235306 -5203174 + MLT1C LTR MaLR 1 467 0 495 178 0 0 chr17 80235403 80235504 -5202976 + (TG)n Simple_repeat Simple_repeat 2 102 0 267 133 0 0 chr17 80240141 80240186 -5198294 + (TCCC)n Simple_repeat Simple_repeat 2 46 0 2248 98 3 0 chr17 80241515 80241822 -5196658 - AluSq SINE Alu -5 308 1 1204 276 79 14 chr17 80241888 80242683 -5195797 - L1ME3A LINE L1 -219 5951 5101 2010 141 26 0 chr17 80242728 80243032 -5195448 - AluJb SINE Alu 0 312 1 1431 99 14 0 chr17 80243062 80243275 -5195205 - L1MA4A LINE L1 -6 6297 6082 2293 88 7 0 chr17 80243275 80243569 -5194911 - AluSx SINE Alu -16 296 1 823 138 7 22 chr17 80243587 80243725 -5194755 - AluJb SINE Alu -176 136 1 462 82 10 51 chr17 80243725 80243823 -5194657 - L1MA4A LINE L1 -212 6091 5998 392 323 12 6 chr17 80244869 80245092 -5193388 + (CA)n Simple_repeat Simple_repeat 1 224 0 507 255 68 25 chr17 80245514 80245675 -5192805 - MER5B DNA MER1_type -4 174 7 1625 214 45 84 chr17 80246236 80246722 -5191758 - MLT1C LTR MaLR 0 467 1 312 277 132 6 chr17 80248131 80248290 -5190190 - L2 LINE L2 -1228 2086 1908 1733 167 40 0 chr17 80248291 80248631 -5189849 + AluJb SINE Alu 1 352 0 300 292 26 51 chr17 80248631 80248826 -5189654 - L2 LINE L2 -1392 1922 1733 422 280 0 0 chr17 80248845 80248952 -5189528 - MLT1B LTR MaLR 0 390 284 973 199 60 26 chr17 80248954 80249094 -5189386 - MLT1B LTR MaLR -124 343 209 2199 98 7 0 chr17 80249094 80249400 -5189080 - AluSx SINE Alu -4 308 1 973 199 60 26 chr17 80249400 80249567 -5188913 - MLT1B LTR MaLR -258 209 6 593 182 45 27 chr17 80250989 80251099 -5187381 + AluJb SINE Alu 14 125 -187 234 268 52 10 chr17 80252221 80252318 -5186162 + MER5B DNA MER1_type 22 122 -56 186 394 61 0 chr17 80253442 80253574 -5184906 - MIR3 SINE MIR -5 203 64 23 0 0 0 chr17 80253878 80253901 -5184579 + AT_rich Low_complexity Low_complexity 1 23 0 1820 163 0 3 chr17 80253905 80254193 -5184287 - AluJb SINE Alu -25 287 1 1079 170 31 10 chr17 80254196 80254390 -5184090 - L1MB3 LINE L1 0 6183 5986 206 241 25 51 chr17 80255543 80255622 -5182858 - L2 LINE L2 -219 3053 2977 560 226 44 77 chr17 80256252 80256433 -5182047 + MIR SINE MIR 51 225 -37 243 243 95 27 chr17 80259064 80259138 -5179342 - MER91A DNA MER1_type -1 195 117 384 274 131 0 chr17 80259142 80259295 -5179185 - MER91A DNA MER1_type -23 173 1 1166 112 0 45 chr17 80259617 80259795 -5178685 - AluSx SINE Alu -85 227 58 472 116 0 0 chr17 80260115 80260184 -5178296 - MER41A LTR ERV1 0 554 486 2237 93 3 16 chr17 80260297 80260610 -5177870 - AluSg SINE Alu -1 309 1 311 273 125 31 chr17 80260837 80260965 -5177515 + MIR3 SINE MIR 67 206 -2 1952 130 0 10 chr17 80261498 80261799 -5176681 + AluJb SINE Alu 3 300 -12 317 289 54 54 chr17 80262536 80262685 -5175795 + MIR SINE MIR 34 182 -80 403 333 72 21 chr17 80263492 80263729 -5174751 + L1ME LINE L1 5574 5822 -299 1874 136 58 0 chr17 80263736 80264030 -5174450 + AluJb SINE Alu 1 311 -1 22 0 0 0 chr17 80264454 80264476 -5174004 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 80264961 80264981 -5173499 + (TTCA)n Simple_repeat Simple_repeat 4 23 0 618 258 252 3 chr17 80264985 80265346 -5173134 - L2 LINE L2 -20 3293 2843 238 345 64 0 chr17 80265359 80265469 -5173011 - L2 LINE L2 -16 3256 3140 2219 90 10 0 chr17 80265564 80265864 -5172616 + AluSp SINE Alu 1 303 -10 551 143 0 0 chr17 80266401 80266485 -5171995 - L1M3 LINE L1 -390 5781 5698 2034 114 0 17 chr17 80266499 80266796 -5171684 - AluSx SINE Alu -16 296 5 231 259 0 37 chr17 80266806 80266887 -5171593 - L1MD3 LINE L1 -14 7981 7904 1165 176 26 26 chr17 80266897 80267164 -5171316 - L1MD3 LINE L1 0 7995 7729 393 305 85 40 chr17 80268309 80268509 -5169971 + L2 LINE L2 3065 3273 -40 247 180 0 0 chr17 80268988 80269038 -5169442 + MIR SINE MIR 103 152 -110 379 150 0 0 chr17 80269386 80269446 -5169034 - AluJ/FLAM SINE Alu -242 60 1 1587 83 10 0 chr17 80269794 80269999 -5168481 + AluSx SINE Alu 1 207 -105 2092 106 0 0 chr17 80271826 80272109 -5166371 - AluSx SINE Alu -8 304 22 2029 161 23 0 chr17 80272153 80272500 -5165980 - L1MB2 LINE L1 0 6171 5817 2076 93 9 46 chr17 80272503 80272826 -5165654 + AluSx SINE Alu 2 312 0 1900 151 10 10 chr17 80272838 80273150 -5165330 + AluJb SINE Alu 1 312 0 527 161 11 11 chr17 80273173 80273260 -5165220 + AluS SINE Alu 2 88 -224 1792 130 4 0 chr17 80273362 80273624 -5164856 + AluSx SINE Alu 39 301 -11 198 0 0 0 chr17 80273625 80273647 -5164833 + (CA)n Simple_repeat Simple_repeat 2 23 0 392 256 26 13 chr17 80273720 80273876 -5164604 + MER63 DNA MER1_type 672 1053 -7 555 146 55 0 chr17 80273917 80274027 -5164453 + MLT2B2 LTR ERVL 2 117 -398 2015 134 3 0 chr17 80274027 80274326 -5164154 + AluJb SINE Alu 1 300 -12 1363 163 62 17 chr17 80274330 80274618 -5163862 + MLT1D LTR MaLR 180 480 -25 289 264 70 47 chr17 80274631 80274760 -5163720 - MIR SINE MIR -111 151 20 1643 143 23 30 chr17 80274889 80275190 -5163290 + AluSx SINE Alu 1 299 -13 286 123 35 0 chr17 80275208 80275265 -5163215 + GA-rich Low_complexity Low_complexity 1 59 0 580 310 96 13 chr17 80275280 80275593 -5162887 + L1MEd LINE L1 92 430 -5689 281 233 35 60 chr17 80275573 80275689 -5162791 + L1MEd LINE L1 1141 1253 -4866 * 1429 271 58 13 chr17 80276675 80277122 -5161358 - MLT1C LTR MaLR 0 467 1 354 299 8 68 chr17 80277510 80277573 -5160907 - L1MEd LINE L1 -2010 4372 4307 963 107 15 0 chr17 80277573 80277704 -5160776 - FLAM_C SINE Alu 0 133 1 1744 122 100 4 chr17 80277714 80277984 -5160496 - AluSx SINE Alu -16 296 1 354 299 8 68 chr17 80277984 80278026 -5160454 - L1MEd LINE L1 -2084 4298 4263 285 167 15 0 chr17 80278032 80278098 -5160382 + Charlie1 DNA MER1_type 2201 2267 -494 460 294 99 78 chr17 80278150 80279104 -5159376 - L1MEd LINE L1 -2124 4258 3326 2079 119 0 0 chr17 80279104 80279417 -5159063 - AluSx SINE Alu 0 313 1 460 294 99 78 chr17 80279417 80279442 -5159038 - L1MEd LINE L1 -3056 3326 3303 583 147 0 49 chr17 80279442 80279544 -5158936 - FLAM_C SINE Alu -10 133 37 460 294 99 78 chr17 80279544 80279845 -5158635 - L1MEd LINE L1 -3079 3303 3010 1683 174 17 3 chr17 80279845 80280139 -5158341 + AluJo SINE Alu 5 302 -10 460 294 99 78 chr17 80280139 80280515 -5157965 - L1MEd LINE L1 -3372 3010 2457 2158 125 0 0 chr17 80280515 80280819 -5157661 + AluSg SINE Alu 1 304 -6 460 294 99 78 chr17 80280819 80280951 -5157529 - L1MEd LINE L1 -3925 2457 2329 1446 192 0 0 chr17 80280994 80281239 -5157241 - AluJb SINE Alu -8 304 60 335 179 67 10 chr17 80281392 80281477 -5157003 - MER58 DNA MER1_type -1 2419 2340 884 173 0 0 chr17 80281477 80281610 -5156870 - FLAM_C SINE Alu 0 133 1 335 179 67 10 chr17 80281610 80281629 -5156851 - MER58 DNA MER1_type -80 2340 101 462 316 56 76 chr17 80281738 80282015 -5156465 - L1MEd LINE L1 -795 1948 1667 2277 106 0 0 chr17 80282015 80282327 -5156153 - AluSx SINE Alu 0 312 1 462 316 56 76 chr17 80282327 80282930 -5155550 - L1MEd LINE L1 -1076 1667 1009 1742 173 0 7 chr17 80282930 80283244 -5155236 - AluJo SINE Alu 0 312 1 462 316 56 76 chr17 80283244 80283726 -5154754 - L1MEd LINE L1 -1734 1009 519 2059 98 22 0 chr17 80283993 80284294 -5154186 - AluSx SINE Alu 0 307 1 1735 146 3 17 chr17 80284296 80284598 -5153882 - AluJo SINE Alu -14 298 1 2263 113 0 0 chr17 80284878 80285189 -5153291 - AluSx SINE Alu -1 311 1 1981 106 3 36 chr17 80285747 80286093 -5152387 + AluSx SINE Alu 1 336 0 2016 113 0 10 chr17 80286752 80287054 -5151426 - AluJb SINE Alu -13 299 1 2382 64 0 0 chr17 80287063 80287360 -5151120 - AluY SINE Alu -14 297 1 2261 90 3 0 chr17 80287361 80287661 -5150819 - AluSx SINE Alu -11 301 1 225 132 0 0 chr17 80287682 80287720 -5150760 - LTR24C LTR ERV1 0 635 598 489 267 36 36 chr17 80288050 80288215 -5150265 + L2 LINE L2 3149 3313 0 1616 172 0 31 chr17 80288903 80289225 -5149255 - AluJb SINE Alu 0 313 1 183 80 0 0 chr17 80289225 80289250 -5149230 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 1103 176 164 0 chr17 80289257 80289356 -5149124 - L1PA16 LINE L1 0 6166 6085 698 10 0 39 chr17 80289356 80289459 -5149021 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 2060 106 3 0 chr17 80289459 80289736 -5148744 - AluSg SINE Alu -32 278 1 1103 176 164 0 chr17 80289736 80289896 -5148584 - L1PA16 LINE L1 -80 6086 5869 2321 58 0 38 chr17 80289903 80290216 -5148264 - AluY SINE Alu -10 301 1 2008 114 3 13 chr17 80290239 80290571 -5147909 - AluSx SINE Alu 0 329 1 291 325 0 0 chr17 80290615 80290698 -5147782 + MIR SINE MIR 78 160 -102 1201 273 61 72 chr17 80290726 80290937 -5147543 - MER77 LTR ERV1 -4 601 389 1957 135 0 0 chr17 80290937 80291252 -5147228 + AluSg SINE Alu 1 315 0 1201 273 61 72 chr17 80291252 80291677 -5146803 - MER77 LTR ERV1 -216 389 54 262 233 60 60 chr17 80292012 80292162 -5146318 - LTR58 LTR ERV1 -17 662 513 498 188 69 42 chr17 80292191 80292335 -5146145 - LTR43 LTR ERV1 -281 321 174 659 195 15 97 chr17 80292569 80292658 -5145822 - LTR39 LTR ERV1 -77 706 639 2030 85 4 4 chr17 80292658 80292951 -5145529 - AluSq SINE Alu 0 307 15 659 195 15 97 chr17 80292951 80293055 -5145425 - LTR39 LTR ERV1 -144 639 528 * 1755 157 48 51 chr17 80293050 80293445 -5145035 - LTR39 LTR ERV1 -388 395 2 2440 187 26 91 chr17 80294098 80294239 -5144241 - MER34B LTR ERV1 0 565 416 2279 77 0 0 chr17 80294239 80294526 -5143954 - AluSx SINE Alu 0 312 26 2440 187 26 91 chr17 80294526 80294988 -5143492 - MER34B LTR ERV1 -149 416 1 338 285 38 25 chr17 80295189 80295347 -5143133 + L1ME4a LINE L1 5961 6120 -1 2092 124 13 0 chr17 80295370 80295677 -5142803 - AluSx SINE Alu -1 311 1 1553 179 23 36 chr17 80296754 80297055 -5141425 - AluJo SINE Alu -15 297 1 884 103 14 41 chr17 80297178 80297324 -5141156 + AluSg/x SINE Alu 135 276 -34 321 305 62 9 chr17 80297822 80298010 -5140470 - MIR SINE MIR -13 195 48 382 281 97 0 chr17 80298168 80298282 -5140198 + MIR SINE MIR 48 172 -90 * 542 286 47 0 chr17 80298274 80298445 -5140035 - MER91A DNA MER1_type -17 179 1 2654 123 23 48 chr17 80298862 80298900 -5139580 - MSTA LTR MaLR 0 428 391 2636 19 7 3 chr17 80298900 80299210 -5139270 + AluY SINE Alu 1 311 0 2654 123 23 48 chr17 80299210 80299410 -5139070 - MSTA LTR MaLR -37 391 203 2182 113 0 3 chr17 80299410 80299720 -5138760 - AluSx SINE Alu -3 309 1 2654 123 23 48 chr17 80299720 80299919 -5138561 - MSTA LTR MaLR -225 203 1 767 214 33 0 chr17 80300095 80300277 -5138203 + MLT1D LTR MaLR 9 196 -309 523 277 103 37 chr17 80300346 80300588 -5137892 + MER21B LTR ERV1 388 645 -218 374 248 29 0 chr17 80300626 80300731 -5137749 - MER115 DNA AcHobo -581 112 5 2200 104 0 0 chr17 80301766 80302065 -5136415 - AluSq SINE Alu -14 299 1 610 144 7 86 chr17 80302439 80302578 -5135902 + FRAM SINE Alu 48 175 -1 1144 186 114 93 chr17 80302702 80302850 -5135630 - LTR48B LTR ERV1 -298 346 203 2240 112 0 0 chr17 80302850 80303154 -5135326 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr17 80303157 80303177 -5135303 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 1144 186 114 93 chr17 80303177 80303358 -5135122 - LTR48B LTR ERV1 -442 202 6 188 356 14 14 chr17 80303397 80303470 -5135010 - L2 LINE L2 0 3272 3200 228 232 18 0 chr17 80303665 80303721 -5134759 + (GAGTG)n Simple_repeat Simple_repeat 2 58 0 215 288 87 65 chr17 80303864 80304093 -5134387 - L2 LINE L2 -34 3238 3005 438 52 103 0 chr17 80304235 80304351 -5134129 + CT-rich Low_complexity Low_complexity 1 128 0 873 182 86 5 chr17 80304671 80304891 -5133589 + LTR37A LTR ERV1 189 426 0 491 252 42 7 chr17 80304898 80305041 -5133439 - MIR SINE MIR -87 175 28 1686 168 0 24 chr17 80305102 80305400 -5133080 - AluJo SINE Alu -20 292 2 2222 77 3 7 chr17 80305586 80305884 -5132596 - AluSx SINE Alu -15 297 1 446 291 34 14 chr17 80305886 80306034 -5132446 - MIR SINE MIR -16 246 96 242 299 13 0 chr17 80307032 80307109 -5131371 - Tigger4(Zombi) DNA MER2_type -620 2111 2034 1795 179 152 41 chr17 80307572 80308064 -5130416 + LTR10A LTR ERV1 1 547 -62 471 239 84 0 chr17 80308152 80308294 -5130186 + MIR SINE MIR 52 205 -57 3040 120 37 6 chr17 80308339 80308822 -5129658 - MER41E LTR ERV1 0 512 15 3597 80 108 4 chr17 80308837 80309339 -5129141 - MER41A LTR ERV1 0 554 1 360 326 177 0 chr17 80309776 80309957 -5128523 + MIR SINE MIR 50 262 0 710 298 39 61 chr17 80310616 80311220 -5127260 + HAL1 LINE L1 813 1429 -1078 574 110 0 0 chr17 80311220 80311302 -5127178 - L1MA9 LINE L1 -5 6307 6226 2409 74 0 0 chr17 80311312 80311623 -5126857 - AluY SINE Alu 0 311 1 710 298 39 61 chr17 80311623 80311742 -5126738 + HAL1 LINE L1 1438 1807 -700 547 220 37 0 chr17 80311760 80311869 -5126611 - MER81 DNA DNA -1 113 1 3402 182 197 15 chr17 80311870 80312797 -5125683 + MER52C LTR ERV1 1 1277 -1 547 259 19 104 chr17 80313446 80313755 -5124725 + HAL1 LINE L1 2225 2507 0 1420 235 35 51 chr17 80314020 80314415 -5124065 - MLT1B LTR MaLR -1 389 1 2354 173 57 2 chr17 80314500 80314904 -5123576 - MSTB LTR MaLR 0 426 1 841 174 0 0 chr17 80315105 80315237 -5123243 + FLAM_A SINE Alu 2 133 0 2572 96 19 22 chr17 80315345 80315710 -5122770 + THE1B LTR MaLR 1 364 0 387 313 7 0 chr17 80316033 80316180 -5122300 - L1MEd LINE L1 -5944 175 28 944 248 21 17 chr17 80316503 80316741 -5121739 + LTR16A LTR ERVL 184 422 -28 702 107 39 0 chr17 80316786 80316889 -5121591 - MER30 DNA MER1_type 0 230 124 781 162 0 0 chr17 80316923 80317040 -5121440 - FLAM_C SINE Alu -15 118 2 2135 97 3 3 chr17 80317062 80317351 -5121129 - AluSx SINE Alu -17 295 7 228 333 14 63 chr17 80317492 80317536 -5120944 - L2 LINE L2 -558 2756 2711 1881 126 35 0 chr17 80317536 80317821 -5120659 - AluSx SINE Alu -17 295 1 228 333 14 63 chr17 80317821 80317983 -5120497 - L2 LINE L2 -603 2711 2560 218 192 0 19 chr17 80317992 80318044 -5120436 + L2 LINE L2 2985 3035 -237 289 299 67 18 chr17 80319454 80319618 -5118862 - L2 LINE L2 -182 3090 2919 436 193 138 28 chr17 80319672 80319738 -5118742 - L2 LINE L2 -42 3271 3214 2070 127 0 16 chr17 80319738 80320052 -5118428 - AluSx SINE Alu -3 309 1 436 193 138 28 chr17 80320052 80320130 -5118350 - L2 LINE L2 -99 3214 3111 229 324 135 12 chr17 80320307 80320477 -5118003 - L2 LINE L2 -572 2742 2552 446 159 11 0 chr17 80320669 80320757 -5117723 + CT-rich Low_complexity Low_complexity 2 90 0 1830 161 0 19 chr17 80320772 80321089 -5117391 - AluJo SINE Alu -1 311 1 835 267 174 35 chr17 80322362 80322792 -5115688 - MLT1J LTR MaLR 0 511 22 621 238 102 34 chr17 80322830 80323036 -5115444 - MIR SINE MIR -14 248 29 255 315 39 39 chr17 80323685 80323815 -5114665 - LTR16C LTR ERVL 0 491 362 920 233 23 53 chr17 80323976 80324442 -5114038 - L1M4 LINE L1 -479 5975 5471 312 287 51 38 chr17 80324456 80324613 -5113867 - L1M4 LINE L1 -4361 2065 1907 832 103 9 0 chr17 80324639 80324755 -5113725 - FLAM_C SINE Alu -16 117 1 2029 119 0 7 chr17 80324781 80325084 -5113396 + AluSg SINE Alu 1 301 -9 2554 184 49 9 chr17 80325084 80325654 -5112826 - L1M4 LINE L1 -964 5182 4590 707 159 7 26 chr17 80325971 80326287 -5112193 + (TGGA)n Simple_repeat Simple_repeat 1 309 0 401 323 44 19 chr17 80326411 80326569 -5111911 - MIR3 SINE MIR -17 191 30 1727 185 0 0 chr17 80327342 80327634 -5110846 - AluJo SINE Alu -20 292 1 414 0 0 0 chr17 80327685 80327731 -5110749 + (TG)n Simple_repeat Simple_repeat 2 47 0 1966 108 14 0 chr17 80327873 80327996 -5110484 + AluSc SINE Alu 1 121 -188 189 0 0 0 chr17 80327996 80328017 -5110463 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1966 108 14 0 chr17 80328017 80328172 -5110308 + AluSc SINE Alu 121 283 -26 2880 140 7 4 chr17 80328172 80328623 -5109857 - L1PA16 LINE L1 -5 6161 5710 540 200 25 0 chr17 80328751 80328871 -5109609 - MIR3 SINE MIR -1 207 85 208 325 25 25 chr17 80329527 80329607 -5108873 - MER91A DNA MER1_type -1 195 116 441 263 26 51 chr17 80329620 80329776 -5108704 - MER91A DNA MER1_type -44 152 1 690 100 10 0 chr17 80330235 80330335 -5108145 + AluS SINE Alu 2 102 -211 530 265 78 7 chr17 80330357 80330693 -5107787 - LTR16C LTR ERVL 0 491 98 1955 99 20 30 chr17 80330901 80331204 -5107276 + AluSx SINE Alu 1 300 -12 225 288 0 15 chr17 80331463 80331529 -5106951 + C-rich Low_complexity Low_complexity 1 65 0 256 368 20 13 chr17 80332062 80332214 -5106266 - MER5A DNA MER1_type 0 189 37 32 26 0 0 chr17 80332220 80332259 -5106221 + AT_rich Low_complexity Low_complexity 1 39 0 816 100 0 0 chr17 80332285 80332395 -5106085 - FLAM_C SINE Alu -32 111 2 2040 106 3 0 chr17 80333940 80334244 -5104236 - AluSx SINE Alu 0 305 1 573 254 34 104 chr17 80334419 80334687 -5103793 - L2 LINE L2 -5 3267 3019 246 295 90 8 chr17 80335904 80336026 -5102454 - MIR3 SINE MIR -32 176 45 217 239 179 0 chr17 80336327 80336394 -5102086 + MIR SINE MIR 178 256 -6 22 70 0 0 chr17 80338982 80339025 -5099455 + AT_rich Low_complexity Low_complexity 1 43 0 586 205 53 53 chr17 80339432 80339603 -5098877 - MIR SINE MIR -37 225 55 2319 89 0 0 chr17 80339704 80340006 -5098474 - AluSx SINE Alu -10 302 1 657 262 67 24 chr17 80340070 80340280 -5098200 + MER20 DNA MER1_type 1 219 0 717 203 7 27 chr17 80340288 80340436 -5098044 - MER5A DNA MER1_type 0 189 45 1515 164 4 4 chr17 80340436 80340698 -5097782 + AluJo SINE Alu 51 312 0 584 136 203 0 chr17 80340707 80340825 -5097655 + FLAM_C SINE Alu 2 143 0 193 214 0 89 chr17 80340828 80340884 -5097596 - MER5A DNA MER1_type -138 51 1 242 285 170 18 chr17 80341030 80341195 -5097285 - MIR3 SINE MIR -11 197 8 1281 146 43 112 chr17 80341332 80341460 -5097020 + AluJb SINE Alu 1 136 -176 1948 115 26 30 chr17 80341460 80341765 -5096715 - AluSx SINE Alu -8 304 1 1281 146 43 112 chr17 80341765 80341958 -5096522 + AluJb SINE Alu 136 300 -12 3485 180 25 14 chr17 80341959 80342610 -5095870 - L1MC1 LINE L1 -15 6318 5661 2564 209 45 11 chr17 80342628 80343155 -5095325 - MLT1G1 LTR MaLR -48 547 3 317 250 0 15 chr17 80343262 80343330 -5095150 - MLT1J LTR MaLR -315 196 130 * 880 156 81 25 chr17 80343323 80343483 -5094997 - MER21B LTR ERV1 -366 497 329 2349 122 48 5 chr17 80343484 80343877 -5094603 - L1MC/D LINE L1 -658 5675 5266 1602 106 0 0 chr17 80344212 80344429 -5094051 + AluSx SINE Alu 6 222 -90 1461 132 125 40 chr17 80344453 80344725 -5093755 - AluJo SINE Alu -17 295 1 276 175 18 0 chr17 80545462 80545519 -4892961 - Charlie3 DNA MER1_type -2652 58 1 229 345 17 34 chr17 80545542 80545661 -4892819 - MIR3 SINE MIR -7 201 85 1920 213 123 18 chr17 80545687 80546181 -4892299 - MER77 LTR ERV1 -6 599 54 1687 186 7 0 chr17 80546659 80546954 -4891526 + AluJo SINE Alu 1 297 -15 919 100 23 0 chr17 80547300 80547430 -4891050 + AluSq/x SINE Alu 1 133 -180 207 0 0 0 chr17 80547553 80547576 -4890904 + (CTG)n Simple_repeat Simple_repeat 1 23 0 313 107 36 18 chr17 80547620 80547676 -4890804 - MSTD LTR MaLR -338 58 2 374 253 41 65 chr17 80547677 80547822 -4890658 + L1MB8 LINE L1 6006 6148 -30 1972 165 15 85 chr17 80547822 80547940 -4890540 - MLT1B LTR MaLR -4 386 261 1866 145 27 0 chr17 80547940 80548237 -4890243 - AluJb SINE Alu -7 305 1 1972 165 15 85 chr17 80548237 80548530 -4889950 - MLT1B LTR MaLR -129 261 4 374 253 41 65 chr17 80548530 80548554 -4889926 + L1MB8 LINE L1 6148 6171 -7 378 172 81 11 chr17 80548879 80548966 -4889514 - LTR37A LTR ERV1 -288 138 46 246 341 177 18 chr17 80550273 80550437 -4888043 - L3 LINE CR1 -77 1500 1311 1032 233 118 45 chr17 80550438 80550768 -4887712 + MLT1A1 LTR MaLR 11 364 -1 2235 103 3 0 chr17 80550789 80551089 -4887391 - AluSg SINE Alu -7 303 3 380 296 87 15 chr17 80551218 80551414 -4887066 - MER113 DNA MER1_type? -181 340 131 1898 143 0 0 chr17 80551421 80551707 -4886773 - AluSx SINE Alu -6 306 21 819 139 8 16 chr17 80551759 80551888 -4886592 + AluJb SINE Alu 2 129 -183 215 325 25 0 chr17 80552115 80552195 -4886285 + MIR SINE MIR 19 100 -108 1060 220 170 38 chr17 80552307 80552648 -4885832 - MLT1D LTR MaLR 0 505 120 668 215 20 22 chr17 80552850 80553006 -4885474 - MLT1D LTR MaLR -368 137 1 396 0 0 0 chr17 80553163 80553207 -4885273 + (CAT)n Simple_repeat Simple_repeat 1 44 0 1068 215 101 124 chr17 80554451 80554880 -4883600 - L1ME3A LINE L1 -5 6165 5749 2146 105 6 10 chr17 80554880 80555193 -4883287 - AluSx SINE Alu 0 312 1 1068 215 101 124 chr17 80555193 80555297 -4883183 - L1ME3A LINE L1 -421 5749 5644 451 316 84 9 chr17 80555300 80555523 -4882957 - L1MEc LINE L1 -4760 1636 1378 441 0 0 0 chr17 80555523 80555572 -4882908 + (TG)n Simple_repeat Simple_repeat 2 50 0 451 316 84 9 chr17 80555572 80555683 -4882797 - L1MEc LINE L1 -5018 1378 1277 421 290 95 21 chr17 80556555 80556905 -4881575 - L1MC4a LINE L1 -2 6119 5734 1500 130 65 19 chr17 80557037 80557298 -4881182 + AluJb SINE Alu 26 298 -14 966 135 0 0 chr17 80557919 80558097 -4880383 + (TGGA)n Simple_repeat Simple_repeat 2 179 0 319 214 14 0 chr17 80558097 80558167 -4880313 + (TGGG)n Simple_repeat Simple_repeat 3 73 0 489 229 11 6 chr17 80558169 80558348 -4880132 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 192 182 0 0 chr17 80558378 80558422 -4880058 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 270 330 11 0 chr17 80558430 80558521 -4879959 + MLT1H1 LTR MaLR 95 186 -369 277 239 0 28 chr17 80558530 80558601 -4879879 - MLT1H1 LTR MaLR -486 69 1 2149 112 0 13 chr17 80560114 80560428 -4878052 - AluSx SINE Alu 0 312 3 261 376 64 0 chr17 80560574 80560699 -4877781 - MIR3 SINE MIR -41 167 35 449 338 14 0 chr17 80560993 80561141 -4877339 - L2 LINE L2 0 3272 3123 190 291 0 0 chr17 80561178 80561233 -4877247 - L2 LINE L2 -229 3043 2989 238 380 72 31 chr17 80561431 80561749 -4876731 - L3 LINE CR1 -80 1497 1167 1434 166 8 20 chr17 80562772 80563025 -4875455 + L1PA16 LINE L1 5911 6160 -6 413 112 4 19 chr17 80563025 80563276 -4875204 + AluSq SINE Alu 1 313 0 218 273 18 0 chr17 80563323 80563378 -4875102 + (TG)n Simple_repeat Simple_repeat 2 57 0 742 266 127 39 chr17 80563534 80563921 -4874559 - MLT1H LTR MaLR -20 529 109 2391 120 37 0 chr17 80564201 80564550 -4873930 - THE1B LTR MaLR -2 362 1 1966 197 15 17 chr17 80564825 80565236 -4873244 - MLT1F LTR MaLR -2 540 131 298 346 31 0 chr17 80566527 80566657 -4871823 - MIR SINE MIR -11 251 118 206 309 173 0 chr17 80568692 80568773 -4869707 + L2 LINE L2 3200 3294 -19 603 298 156 18 chr17 80569109 80569334 -4869146 + MIR SINE MIR 2 257 -5 209 287 96 17 chr17 80569628 80569743 -4868737 - MIR SINE MIR -61 147 24 6206 68 17 54 chr17 80569798 80570790 -4867690 - SVA Other Other 0 1386 432 5603 77 26 12 chr17 80570847 80572004 -4866476 - SVA Other Other -520 866 1 3128 107 18 11 chr17 80572256 80572697 -4865783 - MLT2A1 LTR ERVL 0 444 1 204 275 43 58 chr17 80572722 80572791 -4865689 - MIR SINE MIR -123 85 18 387 340 16 26 chr17 80573514 80573575 -4864905 - MIR SINE MIR -44 218 158 2019 190 60 17 chr17 80573575 80573810 -4864670 - Tigger2a DNA MER2_type -2274 434 211 2141 116 0 0 chr17 80573810 80574113 -4864367 + AluSx SINE Alu 1 303 -9 2019 190 60 17 chr17 80574113 80574202 -4864278 - Tigger2a DNA MER2_type -2497 211 127 336 48 0 0 chr17 80574202 80574244 -4864236 + (GGA)n Simple_repeat Simple_repeat 2 43 0 2019 190 60 17 chr17 80574244 80574334 -4864146 - Tigger2a DNA MER2_type -2581 127 1 387 340 16 26 chr17 80574334 80574466 -4864014 - MIR SINE MIR -104 158 27 338 263 27 5 chr17 80575306 80575435 -4863045 - MIR SINE MIR -72 190 59 221 339 104 0 chr17 80576135 80576250 -4862230 - MIR SINE MIR -80 182 56 282 200 23 8 chr17 80577276 80577407 -4861073 + GA-rich Low_complexity Low_complexity 1 133 0 451 237 42 17 chr17 80578214 80578332 -4860148 - MIR SINE MIR -19 243 123 367 286 71 0 chr17 80578729 80578855 -4859625 - MER63 DNA MER1_type -75 761 1 2089 218 64 9 chr17 80579617 80580067 -4858413 + MLT2B2 LTR ERVL 2 476 -39 792 129 43 10 chr17 80580067 80580474 -4858006 + (TCTA)n Simple_repeat Simple_repeat 1 420 0 392 50 0 8 chr17 80580475 80580540 -4857940 + MLT2B3 LTR ERVL 458 554 0 514 288 136 4 chr17 80580934 80581191 -4857289 - MER102b DNA MER1_type -1 340 50 2712 19 0 0 chr17 80581247 80581555 -4856925 - AluYa5 SINE Alu -3 308 1 315 191 0 0 chr17 80581989 80582057 -4856423 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 984 147 0 0 chr17 80582077 80582295 -4856185 + (TCCA)n Simple_repeat Simple_repeat 1 218 0 413 355 98 16 chr17 80582297 80582604 -4855876 - L2 LINE L2 0 3272 2941 291 227 144 10 chr17 80582931 80583028 -4855452 - MIR SINE MIR -72 190 81 445 153 0 59 chr17 80584380 80584465 -4854015 + Charlie3 DNA MER1_type 2627 2706 -4 349 316 35 0 chr17 80585302 80585416 -4853064 - MIR3 SINE MIR -4 204 87 251 316 66 0 chr17 80585516 80585592 -4852888 - MIR SINE MIR -20 242 162 737 300 59 15 chr17 80585608 80585878 -4852602 - MER21B LTR ERV1 -128 735 454 2652 198 4 2 chr17 80585986 80586516 -4851964 + L1M4 LINE L1 4732 5262 -884 1688 171 0 40 chr17 80586539 80586860 -4851620 - AluJo SINE Alu -4 308 1 1092 236 80 10 chr17 80586864 80587152 -4851328 - MER21B LTR ERV1 -555 308 1 230 311 73 60 chr17 80587153 80587304 -4851176 - MIR SINE MIR -102 160 8 1400 199 31 37 chr17 80588041 80588362 -4850118 - MER33 DNA MER1_type -4 320 2 1974 159 149 7 chr17 80588506 80588882 -4849598 + MER74A LTR ERVL 9 451 -107 459 92 0 0 chr17 80588882 80588947 -4849533 + (GCATG)n Simple_repeat Simple_repeat 5 69 0 1974 159 149 7 chr17 80588947 80588986 -4849494 + MER74A LTR ERVL 451 483 -75 2189 109 0 7 chr17 80588986 80589289 -4849191 - AluSx SINE Alu -11 301 1 477 303 11 40 chr17 80589293 80589369 -4849111 + MIR SINE MIR 93 170 -92 582 223 9 0 chr17 80589369 80589481 -4848999 - MER81 DNA DNA -1 113 1 477 303 11 40 chr17 80589481 80589579 -4848901 + MIR SINE MIR 170 262 0 186 244 0 0 chr17 80589771 80589812 -4848668 - MIR SINE MIR -2 260 220 317 193 72 48 chr17 80590626 80590709 -4847771 + MIR SINE MIR 19 103 -105 2088 131 0 7 chr17 80590994 80591300 -4847180 - AluSx SINE Alu -8 304 1 634 314 5 0 chr17 80591302 80591493 -4846987 + L3 LINE CR1 1285 1476 -101 2102 228 66 31 chr17 80591500 80592053 -4846427 + MLT1E LTR MaLR 1 528 -27 191 233 83 17 chr17 80592095 80592155 -4846325 + L3 LINE CR1 1487 1550 -27 295 261 102 33 chr17 80592317 80592479 -4846001 + MIR SINE MIR 23 198 -64 544 355 14 9 chr17 80592796 80593007 -4845473 - L2 LINE L2 -17 3296 3085 761 266 68 10 chr17 80593026 80593233 -4845247 + MER58A DNA MER1_type 6 224 0 389 244 309 5 chr17 80593233 80593645 -4844835 - L2 LINE L2 -245 3068 2501 332 140 0 0 chr17 80595073 80595123 -4843357 - Charlie3 DNA MER1_type -2594 116 67 225 324 66 59 chr17 80595167 80595255 -4843225 - L3 LINE CR1 -509 1068 977 2561 171 76 12 chr17 80595255 80595739 -4842741 - MLT2B2 LTR ERVL 0 515 1 225 324 66 59 chr17 80595739 80595786 -4842694 - L3 LINE CR1 -600 977 932 1251 238 129 27 chr17 80595983 80596394 -4842086 - LTR16C LTR ERVL -3 488 36 919 145 7 13 chr17 80597928 80598080 -4840400 + FAM SINE Alu 5 155 -30 184 194 65 0 chr17 80598127 80598189 -4840291 + (CATG)n Simple_repeat Simple_repeat 4 69 0 448 261 6 6 chr17 80598225 80598405 -4840075 + (CA)n Simple_repeat Simple_repeat 1 180 0 376 283 6 6 chr17 80598436 80598616 -4839864 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 261 0 22 chr17 80598647 80598831 -4839649 + (CA)n Simple_repeat Simple_repeat 1 180 0 433 253 11 0 chr17 80598850 80599028 -4839452 + (CA)n Simple_repeat Simple_repeat 1 180 0 288 0 0 0 chr17 80601066 80601098 -4837382 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 226 208 21 0 chr17 80601102 80601150 -4837330 - L2 LINE L2 -13 3259 3211 476 214 45 0 chr17 80602530 80602642 -4835838 - MIR SINE MIR -115 147 31 308 358 77 33 chr17 80603158 80603432 -4835048 + L2 LINE L2 2946 3231 -41 2000 124 0 0 chr17 80604017 80604307 -4834173 - AluSx SINE Alu -22 290 1 181 277 0 0 chr17 80604431 80604478 -4834002 - MIR SINE MIR -63 145 99 228 277 0 0 chr17 80604873 80604938 -4833542 + (TG)n Simple_repeat Simple_repeat 1 65 0 558 239 61 44 chr17 80605162 80605342 -4833138 + MLT1G LTR MaLR 408 590 0 1967 143 0 6 chr17 80605633 80605947 -4832533 - AluJb SINE Alu 0 312 1 240 331 52 15 chr17 80606102 80606238 -4832242 + MLT1I LTR MaLR 57 197 -212 667 273 82 55 chr17 80606496 80607115 -4831365 - L1MEc LINE L1 -4134 2262 1627 23 68 0 0 chr17 80607296 80607340 -4831140 + AT_rich Low_complexity Low_complexity 1 44 0 3237 196 41 27 chr17 80607655 80608192 -4830288 + L1MB5 LINE L1 5382 5935 -239 1891 97 18 18 chr17 80608192 80608471 -4830009 - AluSx SINE Alu -10 302 24 3237 196 41 27 chr17 80608471 80608715 -4829765 + L1MB5 LINE L1 5935 6174 0 2254 104 3 0 chr17 80609062 80609370 -4829110 + AluSx SINE Alu 1 309 -3 207 0 0 0 chr17 80609370 80609393 -4829087 + (GA)n Simple_repeat Simple_repeat 2 24 0 254 217 58 0 chr17 80611148 80611217 -4827263 - MIR SINE MIR -127 135 63 217 231 33 44 chr17 80611370 80611461 -4827019 + MER5A DNA MER1_type 44 133 -56 1694 297 107 11 chr17 80612124 80612844 -4825636 - L1ME3A LINE L1 -3 6167 5379 3782 147 36 3 chr17 80612869 80613508 -4824972 - L1MA4 LINE L1 -5 6295 5636 353 310 20 53 chr17 80613522 80613830 -4824650 + L1MC4 LINE L1 6528 6703 -1339 * 384 306 51 36 chr17 80613816 80614215 -4824265 + L1MC4 LINE L1 6525 6703 -1339 * 466 288 46 34 chr17 80614203 80614470 -4824010 + L1MC4 LINE L1 6525 6703 -1339 387 292 35 45 chr17 80614499 80614725 -4823755 + L1MC4 LINE L1 6533 6703 -1339 338 307 29 43 chr17 80614739 80614879 -4823601 + L1MC4 LINE L1 6563 6700 -1342 752 320 43 24 chr17 80614883 80615252 -4823228 - L1M4 LINE L1 -2195 3951 3576 810 192 2 0 chr17 80615655 80616065 -4822415 + (TG)n Simple_repeat Simple_repeat 1 411 0 457 204 13 0 chr17 80616087 80616239 -4822241 + (TG)n Simple_repeat Simple_repeat 1 154 0 251 373 71 0 chr17 80617358 80617527 -4820953 + MIR3 SINE MIR 24 204 -4 214 186 23 0 chr17 80618110 80618153 -4820327 + GA-rich Low_complexity Low_complexity 4 47 0 371 266 44 18 chr17 80619953 80620066 -4818414 - MIR SINE MIR -115 147 32 287 353 194 0 chr17 80620069 80620208 -4818272 + MIR SINE MIR 93 258 -4 855 149 18 0 chr17 80620596 80620764 -4817716 + (TGGA)n Simple_repeat Simple_repeat 4 174 0 284 268 0 8 chr17 80620784 80620911 -4817569 + (TGGA)n Simple_repeat Simple_repeat 3 128 0 389 238 14 0 chr17 80620926 80621073 -4817407 + (TGGA)n Simple_repeat Simple_repeat 4 152 0 594 197 0 0 chr17 80621112 80621259 -4817221 + (TGGA)n Simple_repeat Simple_repeat 2 148 0 231 300 0 0 chr17 80621935 80622065 -4816415 + (CA)n Simple_repeat Simple_repeat 1 130 0 795 223 23 6 chr17 80622556 80622731 -4815749 + MIR SINE MIR 46 223 -39 185 250 113 0 chr17 80623174 80623254 -4815226 - MIR SINE MIR -89 119 31 525 147 0 0 chr17 80624699 80624794 -4813686 + (CA)n Simple_repeat Simple_repeat 2 96 0 2780 189 26 26 chr17 80625536 80625736 -4812744 + L1MC2 LINE L1 5762 5961 -383 1852 125 10 28 chr17 80625736 80626024 -4812456 + AluSx SINE Alu 1 283 -29 2780 189 26 26 chr17 80626024 80626399 -4812081 + L1MC2 LINE L1 5960 6337 -7 227 128 0 26 chr17 80626399 80626438 -4812042 + Alu SINE Alu 128 165 -10 2329 62 3 0 chr17 80626474 80626762 -4811718 + AluSp SINE Alu 1 289 -24 2850 158 55 4 chr17 80626805 80627331 -4811149 + MER74A LTR ERVL 3 555 -3 256 350 21 0 chr17 80627523 80627620 -4810860 - MIR3 SINE MIR -52 156 58 633 179 0 0 chr17 80628206 80628329 -4810151 + (TG)n Simple_repeat Simple_repeat 2 124 0 260 273 0 23 chr17 80629174 80629262 -4809218 + MIR SINE MIR 57 142 -120 294 233 23 0 chr17 80629594 80629684 -4808796 - MIR SINE MIR -55 153 61 306 228 25 25 chr17 80629821 80629900 -4808580 - L2 LINE L2 -2 3311 3233 1687 153 65 106 chr17 80630160 80630392 -4808088 - Tigger2a DNA MER2_type -2282 426 219 2006 145 0 0 chr17 80630392 80630695 -4807785 + AluSx SINE Alu 1 303 -9 1687 153 65 106 chr17 80630695 80630906 -4807574 - Tigger2a DNA MER2_type -2489 219 1 1880 143 35 0 chr17 80631020 80631307 -4807173 - AluSq SINE Alu -16 297 1 1102 114 24 0 chr17 80631623 80631789 -4806691 - AluSg/x SINE Alu -6 306 137 243 325 137 0 chr17 80632013 80632130 -4806350 - L2 LINE L2 -16 3256 3124 600 227 0 0 chr17 80633237 80633387 -4805093 + (CA)n Simple_repeat Simple_repeat 1 150 0 249 57 0 0 chr17 80634858 80634893 -4803587 + (TG)n Simple_repeat Simple_repeat 1 35 0 363 305 0 0 chr17 80635119 80635273 -4803207 + (TG)n Simple_repeat Simple_repeat 1 154 0 1551 146 26 93 chr17 80636743 80637124 -4801356 - L1MB5 LINE L1 -1 6179 5823 274 176 0 0 chr17 80637124 80637175 -4801305 - AluSx SINE Alu -2 298 248 1247 106 0 0 chr17 80637175 80637345 -4801135 - AluSx SINE Alu -124 188 19 1146 194 72 100 chr17 80637361 80637534 -4800946 - L1MB5 LINE L1 -345 5829 5653 2148 104 7 0 chr17 80637534 80637842 -4800638 - AluSg SINE Alu 0 310 1 1146 194 72 100 chr17 80637842 80638050 -4800430 - L1MB5 LINE L1 -521 5653 5464 598 284 87 0 chr17 80638591 80638774 -4799706 + LTR16C LTR ERVL 283 481 -10 1889 130 0 0 chr17 80639571 80639848 -4798632 - AluSx SINE Alu -1 311 35 229 379 34 34 chr17 80641627 80641804 -4796676 + L2 LINE L2 2685 2861 -453 528 228 8 0 chr17 80642845 80642972 -4795508 - MER33 DNA MER1_type -8 355 228 923 237 30 11 chr17 80643074 80643336 -4795144 - MER33 DNA MER1_type -38 286 20 2228 80 0 62 chr17 80644831 80645019 -4793461 - AluSx SINE Alu -8 304 143 2943 45 0 3 chr17 80645019 80645371 -4793109 - L1PA3 LINE L1 0 6155 5805 2228 80 0 62 chr17 80645371 80645506 -4792974 - AluSx SINE Alu -169 143 1 958 209 126 0 chr17 80645585 80645815 -4792665 + MER63 DNA MER1_type 5 263 -798 1763 227 30 42 chr17 80645822 80646000 -4792480 + MER63 DNA MER1_type 556 735 -325 2211 98 0 16 chr17 80646000 80646316 -4792164 - AluY SINE Alu 0 311 1 1763 227 30 42 chr17 80646316 80646643 -4791837 + MER63 DNA MER1_type 735 1055 -5 182 190 0 35 chr17 80646739 80646797 -4791683 + L2 LINE L2 2920 2975 -338 192 152 0 0 chr17 80646822 80646855 -4791625 + CT-rich Low_complexity Low_complexity 4 36 0 2232 111 0 6 chr17 80647620 80647935 -4790545 + AluSq SINE Alu 1 313 0 1125 162 35 35 chr17 80648240 80648468 -4790012 - AluJo SINE Alu 0 312 85 2149 84 25 0 chr17 80649098 80649384 -4789096 - AluSx SINE Alu -14 298 6 213 260 0 0 chr17 80650459 80650536 -4787944 + (TG)n Simple_repeat Simple_repeat 1 77 0 647 153 0 0 chr17 80651023 80651121 -4787359 + MER4A LTR ERV1 1 98 -566 1919 100 7 27 chr17 80651166 80651465 -4787015 + MER4A LTR ERV1 372 664 0 314 256 17 68 chr17 80652194 80652311 -4786169 + MIR SINE MIR 39 149 -113 1720 165 0 46 chr17 80652369 80652527 -4785953 + LTR39 LTR ERV1 412 576 -207 1769 160 10 16 chr17 80652527 80652839 -4785641 + AluSx SINE Alu 1 310 -2 1720 165 0 46 chr17 80652839 80653007 -4785473 + LTR39 LTR ERV1 576 783 0 1996 137 3 0 chr17 80653779 80654085 -4784395 - AluSx SINE Alu -3 309 3 333 205 39 0 chr17 80654088 80654166 -4784314 + MER45A DNA AcHobo 98 178 0 212 281 115 10 chr17 80654166 80654262 -4784218 - MIR SINE MIR -72 190 85 375 294 10 0 chr17 80655667 80655769 -4782711 + G-rich Low_complexity Low_complexity 1 103 0 241 266 11 65 chr17 80655793 80655977 -4782503 + (GGGTG)n Simple_repeat Simple_repeat 4 177 0 216 308 75 9 chr17 80658752 80658859 -4779621 - L2 LINE L2 0 3272 3159 207 122 0 49 chr17 80658988 80659029 -4779451 + L2 LINE L2 3233 3271 -1 2570 123 3 11 chr17 80659208 80659575 -4778905 - THE1B LTR MaLR 0 364 1 255 315 16 47 chr17 80659774 80659901 -4778579 - MIR SINE MIR -65 197 75 508 257 0 18 chr17 80660065 80660178 -4778302 - MER63A DNA MER1_type -30 180 70 832 258 72 0 chr17 80661263 80661457 -4777023 - MER63A DNA MER1_type 0 210 3 3621 142 68 3 chr17 80661526 80662139 -4776341 + MER39B LTR ERV1 1 653 0 1774 144 45 10 chr17 80662541 80662833 -4775647 + AluSx SINE Alu 11 312 0 382 264 58 71 chr17 80664300 80664455 -4774025 + MIR SINE MIR 94 246 -16 206 274 0 0 chr17 80664461 80664512 -4773968 + L2 LINE L2 3209 3259 -13 362 245 86 7 chr17 80664952 80665091 -4773389 - L1ME4a LINE L1 -11 6110 5961 191 286 0 118 chr17 80665214 80665333 -4773147 - MER5B DNA MER1_type -68 110 6 2297 91 3 3 chr17 80665450 80665757 -4772723 - AluSq SINE Alu -6 307 1 2106 98 3 23 chr17 80665949 80666254 -4772226 - AluSx SINE Alu -13 299 1 1454 144 0 87 chr17 80666968 80667266 -4771214 - AluJo SINE Alu -30 282 11 225 269 65 11 chr17 80667825 80667918 -4770562 - MER3 DNA MER1_type -4 205 108 296 189 205 39 chr17 80667918 80668045 -4770435 + MER90 LTR ERV1 1 148 -427 927 262 26 4 chr17 80668063 80668292 -4770188 + MER90 LTR ERV1 380 613 -1 491 273 18 0 chr17 80668292 80668400 -4770080 - MER3 DNA MER1_type -99 110 1 398 305 147 37 chr17 80668411 80668563 -4769917 + MIR SINE MIR 48 226 -36 2536 213 77 8 chr17 80668563 80669093 -4769387 + MLT1F1 LTR MaLR 1 567 0 398 305 147 37 chr17 80669093 80669130 -4769350 + MIR SINE MIR 226 258 -4 2149 110 0 0 chr17 80671940 80672232 -4766248 - AluSq SINE Alu -21 292 1 262 304 11 11 chr17 80672264 80672356 -4766124 + CT-rich Low_complexity Low_complexity 1 92 0 2316 83 0 0 chr17 80672393 80672694 -4765786 - AluY SINE Alu -10 301 1 351 270 60 0 chr17 80672702 80672802 -4765678 + MER63 DNA MER1_type 732 837 -225 417 220 0 11 chr17 80674607 80674698 -4763782 + L1MB5 LINE L1 6085 6174 0 2145 109 0 0 chr17 80675969 80676262 -4762218 + AluSx SINE Alu 1 293 -19 819 172 21 94 chr17 80676343 80676450 -4762030 + MER45A DNA AcHobo 1 89 -1492 592 168 84 69 chr17 80676450 80676581 -4761899 - FLAM_A SINE Alu 0 133 1 819 172 21 94 chr17 80676581 80676665 -4761815 + MER45A DNA AcHobo 89 178 0 828 253 5 27 chr17 80677305 80677526 -4760954 - AluSq SINE Alu -96 217 2 362 153 8 25 chr17 80677528 80677616 -4760864 + MER74B LTR ERVL 475 590 0 332 244 81 91 chr17 80678332 80678529 -4759951 - MIR3 SINE MIR -6 202 8 274 278 14 0 chr17 80678545 80678617 -4759863 + CT-rich Low_complexity Low_complexity 4 76 0 302 208 23 23 chr17 80678619 80678749 -4759731 + C-rich Low_complexity Low_complexity 2 131 0 217 397 14 14 chr17 80679439 80679580 -4758900 + MER5A DNA MER1_type 33 173 -16 864 266 50 0 chr17 80680407 80680606 -4757874 - MER3 DNA MER1_type 0 209 1 279 261 0 45 chr17 80680796 80680884 -4757596 - L2 LINE L2 -2 3270 3187 1296 240 37 21 chr17 80681604 80682059 -4756421 - L1MEc LINE L1 -3936 2300 1863 * 2545 215 42 42 chr17 80682015 80682629 -4755851 + L1ME1 LINE L1 4862 5485 -681 1916 149 7 3 chr17 80682629 80682931 -4755549 - AluSx SINE Alu -9 303 1 2545 215 42 42 chr17 80682931 80683311 -4755169 + L1ME1 LINE L1 5485 5864 -302 * 4191 270 54 29 chr17 80683308 80685127 -4753353 - L1MEc LINE L1 -4486 1910 46 366 268 43 55 chr17 80685304 80685468 -4753012 + L2 LINE L2 2210 2371 -943 213 326 85 74 chr17 80685503 80685773 -4752707 + L2 LINE L2 2997 3269 -3 687 199 175 0 chr17 80685885 80686051 -4752429 - MER58A DNA MER1_type -1 223 29 225 0 0 0 chr17 80686306 80686331 -4752149 + (TG)n Simple_repeat Simple_repeat 2 26 0 188 283 75 0 chr17 80686340 80686393 -4752087 + MIR SINE MIR 90 147 -61 288 0 0 0 chr17 80686933 80686965 -4751515 + (TG)n Simple_repeat Simple_repeat 1 32 0 273 57 0 0 chr17 80686965 80687000 -4751480 + (GA)n Simple_repeat Simple_repeat 2 36 0 247 287 23 11 chr17 80690684 80690771 -4747709 + MIR SINE MIR 7 94 -168 216 315 161 0 chr17 80691516 80691665 -4746815 - MIR SINE MIR -62 200 28 1813 183 50 8 chr17 80691679 80692056 -4746424 - Tigger2 DNA MER2_type -70 2648 2256 320 225 0 28 chr17 80692029 80692100 -4746380 - Tigger2 DNA MER2_type -2649 69 1 * 420 329 40 7 chr17 80692363 80692515 -4745965 + MIR SINE MIR 87 243 -19 346 279 79 55 chr17 80693010 80693175 -4745305 - L2 LINE L2 -24 3289 3121 518 287 6 6 chr17 80693458 80693625 -4744855 - MER117 DNA MER1_type -27 170 4 282 331 84 19 chr17 80694200 80694354 -4744126 + MIR SINE MIR 86 249 -13 1430 205 24 59 chr17 80694416 80694763 -4743717 + MLT1A1 LTR MaLR 2 337 -28 1559 111 36 13 chr17 80694763 80694988 -4743492 - MER30 DNA MER1_type 0 230 1 1430 205 24 59 chr17 80694988 80695015 -4743465 + MLT1A1 LTR MaLR 337 363 -2 658 303 39 17 chr17 80695017 80695248 -4743232 + HERV16 LTR ERVL 2021 2256 -2740 641 333 42 0 chr17 80695297 80695582 -4742898 + L1ME1 LINE L1 79 375 -6021 467 238 7 0 chr17 80695588 80695739 -4742741 + (CA)n Simple_repeat Simple_repeat 1 152 0 660 224 0 10 chr17 80695753 80696244 -4742236 + (CA)n Simple_repeat Simple_repeat 1 486 0 1342 285 21 41 chr17 80696283 80696355 -4742125 + L1ME1 LINE L1 375 447 -5949 192 40 0 0 chr17 80696355 80696380 -4742100 + (TG)n Simple_repeat Simple_repeat 1 25 0 1342 285 21 41 chr17 80696380 80696868 -4741612 + L1ME1 LINE L1 447 924 -5472 392 0 21 0 chr17 80696877 80696925 -4741555 + (CA)n Simple_repeat Simple_repeat 1 49 0 1676 169 15 25 chr17 80696931 80697257 -4741223 - MER44D DNA MER2_type 0 609 17 427 212 82 6 chr17 80697258 80697428 -4741052 + L1ME1 LINE L1 971 1153 -5243 1710 124 31 4 chr17 80697441 80697523 -4740957 + AluSg SINE Alu 40 118 -192 279 0 0 0 chr17 80697523 80697554 -4740926 + (CA)n Simple_repeat Simple_repeat 2 32 0 1710 124 31 4 chr17 80697554 80697730 -4740750 + AluSg SINE Alu 118 305 -5 914 243 120 50 chr17 80697753 80698094 -4740386 + MLT1A1 LTR MaLR 1 365 0 3261 246 61 19 chr17 80698169 80698734 -4739746 + L1ME1 LINE L1 1302 1842 -4373 2332 70 9 22 chr17 80698734 80699049 -4739431 + AluY SINE Alu 1 311 0 3261 246 61 19 chr17 80699049 80700455 -4738025 + L1ME1 LINE L1 1842 3550 -2665 * 4104 220 50 28 chr17 80700425 80702226 -4736254 + L1ME1 LINE L1 3959 5816 -419 1236 161 183 50 chr17 80702226 80702604 -4735876 - MSTC LTR MaLR 0 428 1 4104 220 50 28 chr17 80702604 80703029 -4735451 + L1ME1 LINE L1 5816 6230 -5 1234 174 37 127 chr17 80703124 80703526 -4734954 - MLT1B LTR MaLR -21 369 4 437 286 164 0 chr17 80703569 80703740 -4734740 + LTR16A LTR ERVL 252 450 0 575 218 93 19 chr17 80704285 80704455 -4734025 + MIR SINE MIR 10 187 -63 1784 156 3 21 chr17 80704486 80704775 -4733705 - AluJo SINE Alu -28 284 1 180 338 68 0 chr17 80704887 80704961 -4733519 - MIR3 SINE MIR -21 187 109 236 322 86 13 chr17 80705143 80705295 -4733185 + L2 LINE L2 2687 2849 -465 2364 107 0 0 chr17 80705789 80706098 -4732382 + AluSx SINE Alu 1 309 -3 2021 172 20 6 chr17 80706119 80706503 -4731977 + MLT1B LTR MaLR 1 466 -1 2385 138 5 22 chr17 80707083 80707453 -4731027 - THE1B LTR MaLR 0 364 1 711 255 127 5 chr17 80707637 80707849 -4730631 - MIR SINE MIR 0 262 25 1824 127 121 0 chr17 80707851 80708181 -4730299 - THE1C LTR MaLR 0 375 6 2310 40 0 0 chr17 80708566 80708841 -4729639 + L1PA4 LINE L1 5878 6152 -3 237 292 0 0 chr17 80710228 80710293 -4728187 + MIR SINE MIR 90 154 -108 1476 153 20 7 chr17 80710412 80710713 -4727767 - L1MCa LINE L1 -5162 1264 960 1105 182 83 45 chr17 80710713 80710977 -4727503 + MER66B LTR ERV1 212 485 -1 3385 153 14 2 chr17 80710977 80711547 -4726933 + L1MB3 LINE L1 5607 6183 0 1720 134 42 12 chr17 80711562 80711897 -4726583 + L1MCa LINE L1 1741 2085 -4341 991 245 43 51 chr17 80711897 80712248 -4726232 - MER87 LTR ERV1 0 541 194 2694 102 5 3 chr17 80712249 80712623 -4725857 + THE1C LTR MaLR 1 375 0 512 170 0 0 chr17 80712783 80712877 -4725603 + L1MCa LINE L1 2082 2175 -4251 861 155 15 130 chr17 80712877 80713077 -4725403 + MLT1C LTR MaLR 213 466 -1 771 202 66 10 chr17 80713097 80713295 -4725185 - L1MD3 LINE L1 -10 7985 7777 795 250 164 8 chr17 80713296 80713564 -4724916 - L2 LINE L2 -767 2547 2238 201 257 27 54 chr17 80714090 80714164 -4724316 + L2 LINE L2 3188 3259 -13 2389 105 0 0 chr17 80714529 80714833 -4723647 - AluSx SINE Alu -8 304 1 232 279 88 0 chr17 80715734 80715802 -4722678 + L3b LINE CR1 1322 1395 -188 277 174 52 29 chr17 80716776 80716898 -4721582 - MER69 DNA AcHobo -16 2510 30 296 176 15 0 chr17 80717406 80717474 -4721006 + G-rich Low_complexity Low_complexity 3 71 0 663 13 0 0 chr17 80717928 80718004 -4720476 + (GGGAA)n Simple_repeat Simple_repeat 3 78 0 1143 227 97 24 chr17 80718437 80718860 -4719620 + MLT1C LTR MaLR 6 459 -8 521 211 94 17 chr17 80719454 80719634 -4718846 - LTR16B LTR ERVL -2 462 269 1879 151 60 33 chr17 80719888 80720253 -4718227 - THE1C LTR MaLR 0 375 1 2151 118 25 68 chr17 80721766 80722166 -4716314 + Tigger2a DNA MER2_type 1 383 -51 306 267 83 17 chr17 80722883 80723003 -4715477 + MIR SINE MIR 25 152 -56 25 31 0 0 chr17 80773539 80773571 -4664909 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr17 80773571 80773599 -4664881 + (T)n Simple_repeat Simple_repeat 1 28 0 2069 75 24 0 chr17 80773599 80773854 -4664626 + AluSc SINE Alu 38 298 -11 2396 101 0 0 chr17 80776870 80777168 -4661312 + AluSq SINE Alu 1 298 -15 340 257 50 50 chr17 80777503 80777643 -4660837 + MIR3 SINE MIR 68 207 -1 365 269 144 36 chr17 80778122 80778289 -4660191 + L1ME LINE L1 5606 5790 -331 420 240 62 23 chr17 80778359 80778488 -4659992 - MER117 DNA MER1_type -61 136 3 231 250 0 0 chr17 80780512 80780564 -4657916 + C-rich Low_complexity Low_complexity 2 53 0 436 192 61 20 chr17 80780921 80781020 -4657460 + MER5A DNA MER1_type 7 109 -80 218 252 282 19 chr17 80780942 80781045 -4657435 - MER5A DNA MER1_type -16 173 44 * 2548 64 0 13 chr17 80781854 80782166 -4656314 + AluY SINE Alu 1 308 -3 3457 120 10 2 chr17 80782279 80782883 -4655597 + L1MB1 LINE L1 5208 5812 -479 786 156 56 0 chr17 80782883 80783061 -4655419 + L1MA8 LINE L1 6103 6291 0 2346 94 0 7 chr17 80783097 80783394 -4655086 + AluSx SINE Alu 14 308 -4 437 239 10 8 chr17 80783447 80783597 -4654883 + L1MB1 LINE L1 5789 5939 -229 1109 150 5 20 chr17 80783990 80784190 -4654290 - AluSq SINE Alu -106 207 11 4393 164 28 25 chr17 80784202 80784695 -4653785 + L1MB1 LINE L1 5219 5718 -450 2117 117 50 0 chr17 80784695 80784978 -4653502 + AluSx SINE Alu 1 297 -15 4393 164 28 25 chr17 80784978 80785395 -4653085 + L1MB1 LINE L1 5718 6132 -36 884 134 7 7 chr17 80785395 80785544 -4652936 + MLT1A1 LTR MaLR 1 149 -216 7724 177 16 10 chr17 80785555 80788021 -4650459 + L1PA16 LINE L1 3674 6165 -1 2323 82 0 0 chr17 80788031 80788342 -4650138 + AluSx SINE Alu 1 311 0 918 223 68 0 chr17 80788342 80788548 -4649932 + MLT1A1 LTR MaLR 146 365 0 517 140 26 11 chr17 80788548 80788664 -4649816 + L1MD3 LINE L1 7719 7918 -77 735 208 74 35 chr17 80788672 80788874 -4649606 - MER20 DNA MER1_type -6 213 4 336 151 27 14 chr17 80788874 80788947 -4649533 + L1MD3 LINE L1 7922 7995 0 2192 105 21 0 chr17 80789265 80789550 -4648930 - AluSx SINE Alu -1 311 21 418 59 0 0 chr17 80789550 80789601 -4648879 - Alu SINE Alu -258 52 2 602 319 137 21 chr17 80789679 80790153 -4648327 + L1MC4a LINE L1 5610 6138 -1670 21 0 0 0 chr17 80790247 80790268 -4648212 + AT_rich Low_complexity Low_complexity 1 21 0 2395 113 3 3 chr17 80790389 80790699 -4647781 - AluSx SINE Alu -2 310 1 1515 162 20 86 chr17 80791286 80791628 -4646852 + AluJo SINE Alu 1 322 0 325 271 0 0 chr17 80791654 80791724 -4646756 - MER81 DNA DNA -44 70 1 2301 123 0 0 chr17 80792551 80792861 -4645619 + AluSg SINE Alu 1 310 0 834 316 29 15 chr17 80793244 80793656 -4644824 - LTR16C LTR ERVL -10 481 64 2077 128 3 16 chr17 80793841 80793977 -4644503 + AluSx SINE Alu 1 137 -175 2303 90 7 0 chr17 80793977 80794307 -4644173 + AluY SINE Alu 1 311 0 2077 128 3 16 chr17 80794307 80794483 -4643997 + AluSx SINE Alu 137 309 -3 1614 192 3 11 chr17 80794492 80794806 -4643674 + AluJb SINE Alu 1 312 0 1546 218 71 25 chr17 80794902 80795080 -4643400 + MLT1C LTR MaLR 6 174 -293 315 0 0 0 chr17 80795080 80795115 -4643365 + (CA)n Simple_repeat Simple_repeat 2 36 0 1546 218 71 25 chr17 80795115 80795372 -4643108 + MLT1C LTR MaLR 174 461 -6 180 345 0 0 chr17 80795466 80795521 -4642959 + L2 LINE L2 3005 3059 -254 2455 101 0 0 chr17 80795766 80796074 -4642406 - AluSx SINE Alu -2 310 3 2365 78 3 3 chr17 80796787 80797081 -4641399 + AluSx SINE Alu 1 294 -18 634 181 59 143 chr17 80797658 80797717 -4640763 + MER20 DNA MER1_type 1 63 -156 2292 125 0 0 chr17 80797717 80798021 -4640459 + AluSx SINE Alu 1 304 -8 634 181 59 143 chr17 80798021 80798198 -4640282 + MER20 DNA MER1_type 63 217 -2 460 214 107 14 chr17 80799133 80799273 -4639207 + L1ME4a LINE L1 5774 5926 -195 315 167 13 64 chr17 80799343 80799421 -4639059 + L1ME4a LINE L1 6046 6119 -2 213 254 0 56 chr17 80800127 80800198 -4638282 - L2 LINE L2 0 3272 3206 579 184 106 50 chr17 80800236 80800415 -4638065 - MER5A DNA MER1_type 0 189 1 208 83 0 56 chr17 80801584 80801620 -4636860 + (TCCCC)n Simple_repeat Simple_repeat 5 38 0 3135 190 41 77 chr17 80803342 80803396 -4635084 - L1MB5 LINE L1 -8 6166 6112 1824 149 0 26 chr17 80803396 80803536 -4634944 + AluJb SINE Alu 1 143 -169 2207 107 0 0 chr17 80803536 80803836 -4634644 + AluSx SINE Alu 1 300 -12 1824 149 0 26 chr17 80803836 80804003 -4634477 + AluJb SINE Alu 143 300 -12 3135 190 41 77 chr17 80804003 80804445 -4634035 - L1MB5 LINE L1 -62 6112 5655 2239 105 3 0 chr17 80804445 80804749 -4633731 + AluSp SINE Alu 7 311 -2 3135 190 41 77 chr17 80804749 80804825 -4633655 - L1MB5 LINE L1 -519 5655 5578 2010 138 0 0 chr17 80804825 80805116 -4633364 - AluJb SINE Alu -11 301 11 3135 190 41 77 chr17 80805116 80805368 -4633112 - L1MB5 LINE L1 -596 5578 5370 2119 127 85 8 chr17 80806511 80806874 -4631606 + MSTA LTR MaLR 1 391 -37 563 333 16 28 chr17 80807261 80807510 -4630970 - MIR SINE MIR -1 261 16 2089 101 3 10 chr17 80807819 80808115 -4630365 - AluSq SINE Alu -19 294 1 189 323 61 0 chr17 80808219 80808318 -4630162 + MIR SINE MIR 84 188 -74 970 205 34 24 chr17 80809260 80809465 -4629015 - MER63A DNA MER1_type -2 208 2 211 215 266 25 chr17 80809762 80809841 -4628639 + MIR3 SINE MIR 62 159 -49 244 324 48 6 chr17 80809848 80810009 -4628471 + MER5A DNA MER1_type 7 178 0 261 346 69 10 chr17 80812728 80812829 -4625651 - L2 LINE L2 -20 3293 3187 436 297 69 11 chr17 80813966 80814141 -4624339 + MIR SINE MIR 1 185 -77 216 158 0 0 chr17 80814225 80814263 -4624217 + (CTA)n Simple_repeat Simple_repeat 2 39 0 198 250 39 0 chr17 80814574 80814626 -4623854 + MIR SINE MIR 21 74 -188 216 0 0 0 chr17 80815164 80815188 -4623292 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 1200 229 22 0 chr17 80815389 80815656 -4622824 + MER68 LTR ERV1 5 277 -285 2219 108 3 0 chr17 80815660 80815965 -4622515 + AluSx SINE Alu 1 306 -6 404 52 83 21 chr17 80815965 80816061 -4622419 + GA-rich Low_complexity Low_complexity 1 102 0 387 246 36 99 chr17 80816346 80816598 -4621882 - LTR16A LTR ERVL -127 323 88 180 0 0 0 chr17 80817174 80817194 -4621286 + (TG)n Simple_repeat Simple_repeat 2 21 0 285 330 10 0 chr17 80818063 80818160 -4620320 - MIR SINE MIR -48 214 117 2088 98 0 0 chr17 80818267 80818544 -4619936 - AluSx SINE Alu -1 311 35 1666 74 0 14 chr17 80818805 80819022 -4619458 + AluY SINE Alu 83 296 -15 1780 153 16 25 chr17 80819605 80819919 -4618561 - AluJb SINE Alu -1 311 1 573 306 25 38 chr17 80819961 80820196 -4618284 + MLT1K LTR MaLR 120 351 -237 294 73 0 0 chr17 80820228 80820269 -4618211 + (CA)n Simple_repeat Simple_repeat 1 41 0 1925 94 0 0 chr17 80820909 80821163 -4617317 - AluSx SINE Alu -58 254 1 1915 246 50 22 chr17 80821173 80821381 -4617099 + L1ME1 LINE L1 5474 5675 -659 1952 158 0 0 chr17 80821381 80821691 -4616789 + AluJo SINE Alu 1 310 -2 1915 246 50 22 chr17 80821691 80822125 -4616355 + L1ME1 LINE L1 5675 6334 0 802 141 0 16 chr17 80822176 80822304 -4616176 + FLAM_C SINE Alu 1 126 -17 2387 70 3 0 chr17 80822525 80822823 -4615657 + AluSq SINE Alu 1 299 -14 345 320 24 16 chr17 80823984 80824109 -4614371 - MIR SINE MIR -119 143 18 272 292 14 0 chr17 80824191 80824263 -4614217 + MER5B DNA MER1_type 5 77 -101 1398 49 0 22 chr17 80825103 80825288 -4613192 + AluY SINE Alu 1 181 -130 1126 134 0 0 chr17 80825316 80825473 -4613007 + FRAM SINE Alu 1 157 -9 2281 63 0 13 chr17 80825476 80825776 -4612704 + AluY SINE Alu 1 296 -15 1967 118 7 3 chr17 80826488 80826785 -4611695 + AluSx SINE Alu 1 298 -14 186 376 34 26 chr17 80826812 80826929 -4611551 + L2 LINE L2 3153 3270 -43 2224 223 28 22 chr17 80827012 80827514 -4610966 - MLT1D LTR MaLR 0 505 1 424 317 7 0 chr17 80827548 80827693 -4610787 + MER103 DNA DNA 2 147 -19 489 321 47 5 chr17 80829201 80829394 -4609086 + MIR3 SINE MIR 3 203 -5 21 36 0 0 chr17 80831142 80831170 -4607310 + AT_rich Low_complexity Low_complexity 1 28 0 2235 93 3 0 chr17 80831272 80831572 -4606908 - AluSx SINE Alu -11 301 1 330 290 97 66 chr17 80831718 80831977 -4606503 - L2 LINE L2 0 3272 3006 203 296 37 0 chr17 80832861 80832942 -4605538 - L2 LINE L2 -509 2805 2722 1548 151 29 18 chr17 80832983 80833261 -4605219 + AluJb SINE Alu 1 281 -31 307 198 81 35 chr17 80833351 80833437 -4605043 - MER21B LTR ERV1 -773 90 1 1973 279 38 29 chr17 80833443 80833573 -4604907 + L1MEc LINE L1 2046 2173 -4042 182 37 37 0 chr17 80833573 80833600 -4604880 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1973 279 38 29 chr17 80833600 80833760 -4604720 + L1MEc LINE L1 2173 2330 -3885 2426 78 0 0 chr17 80833760 80834069 -4604411 - AluY SINE Alu -2 309 1 1973 279 38 29 chr17 80834069 80834639 -4603841 + L1MEc LINE L1 2330 2885 -3330 2243 95 3 0 chr17 80835048 80835352 -4603128 + AluSx SINE Alu 1 305 -7 266 113 0 38 chr17 80835352 80835405 -4603075 + (GGA)n Simple_repeat Simple_repeat 1 51 0 542 216 48 8 chr17 80835803 80835928 -4602552 + MIR SINE MIR 46 175 -87 209 265 15 15 chr17 80835918 80835986 -4602494 - MIR SINE MIR -60 202 135 * 2036 110 10 14 chr17 80836050 80836360 -4602120 + AluSx SINE Alu 1 309 0 1471 216 126 0 chr17 80836471 80836907 -4601573 - Charlie4a DNA MER1_type 0 508 18 2489 71 0 0 chr17 80837768 80838079 -4600401 + AluY SINE Alu 1 311 0 280 205 80 108 chr17 80838276 80838437 -4600043 + MER5A DNA MER1_type 3 165 -17 2110 106 74 18 chr17 80838698 80839037 -4599443 - THE1B LTR MaLR -6 358 1 819 97 0 97 chr17 80839204 80839348 -4599132 - AluSp/q SINE Alu -9 304 175 2017 108 0 3 chr17 80839349 80839636 -4598844 + AluSx SINE Alu 25 310 -2 1737 157 25 4 chr17 80839902 80840183 -4598297 + AluSx SINE Alu 1 287 -25 300 159 48 0 chr17 80840465 80840528 -4597952 + MIR SINE MIR 87 152 -110 685 208 26 13 chr17 80842356 80842510 -4595970 - MLT1B LTR MaLR 0 390 235 397 121 0 0 chr17 80842511 80842569 -4595911 + MER1A DNA MER1_type 1 58 -469 * 2422 111 3 6 chr17 80842568 80842919 -4595561 + MER1A DNA MER1_type 177 526 -3 407 150 0 168 chr17 80842938 80842994 -4595486 - MLT1B LTR MaLR -296 94 65 2019 130 0 6 chr17 80842994 80843309 -4595171 - AluSq SINE Alu 0 313 1 407 150 0 168 chr17 80843309 80843365 -4595115 - MLT1B LTR MaLR -325 65 1 207 150 50 0 chr17 80844737 80844799 -4593681 + G-rich Low_complexity Low_complexity 1 65 0 4459 130 85 55 chr17 80846579 80848004 -4590476 + pTR5 LTR ERV1 743 2606 0 1328 246 82 56 chr17 80848680 80848785 -4589695 + MLT2B3 LTR ERVL 1 102 -452 1802 147 0 14 chr17 80848785 80849078 -4589402 - AluJb SINE Alu -23 289 1 1328 246 82 56 chr17 80849078 80849472 -4589008 + MLT2B3 LTR ERVL 102 513 -41 2245 113 0 0 chr17 80849610 80849921 -4588559 + AluSx SINE Alu 1 311 -1 3851 82 45 74 chr17 80850100 80850285 -4588195 - MER4A LTR ERV1 0 600 411 2303 68 3 3 chr17 80850285 80850581 -4587899 + AluY SINE Alu 1 296 -15 1164 114 0 0 chr17 80850584 80850760 -4587720 + (TA)n Simple_repeat Simple_repeat 1 176 0 3851 82 45 74 chr17 80850760 80851054 -4587426 - MER4A LTR ERV1 -191 409 136 2414 56 0 3 chr17 80851054 80851357 -4587123 - AluY SINE Alu -9 302 1 3851 82 45 74 chr17 80851357 80851490 -4586990 - MER4A LTR ERV1 -464 136 1 595 267 4 20 chr17 80851660 80851840 -4586640 + MLT2B1 LTR ERVL 265 458 -96 838 193 183 94 chr17 80851870 80852451 -4586029 - LTR27 LTR ERV1 -2 634 8 1937 145 7 3 chr17 80852592 80852888 -4585592 + AluSx SINE Alu 1 297 -15 496 309 103 58 chr17 80852910 80853133 -4585347 - L1M4 LINE L1 -2047 4099 3867 387 351 76 32 chr17 80853137 80853322 -4585158 + L1M4c LINE L1 10 202 -6657 2343 87 0 6 chr17 80853419 80853731 -4584749 + AluSg SINE Alu 1 310 0 749 248 32 54 chr17 80853950 80854145 -4584335 + L1M4c LINE L1 1254 1452 -5495 1941 154 3 10 chr17 80854145 80854451 -4584029 + AluSq SINE Alu 1 304 -9 749 248 32 54 chr17 80854451 80854663 -4583817 + L1M4c LINE L1 1452 1656 -5291 1773 163 19 7 chr17 80854690 80854997 -4583483 + AluJb SINE Alu 1 311 -1 996 185 20 57 chr17 80855148 80855446 -4583034 + L1MA7 LINE L1 6001 6287 -4 21 0 0 0 chr17 80855744 80855765 -4582715 + AT_rich Low_complexity Low_complexity 1 21 0 1998 184 107 32 chr17 80855818 80856260 -4582220 + MLT1F LTR MaLR 1 487 -55 5275 120 0 3 chr17 80856260 80857004 -4581476 + L1PA14 LINE L1 5420 6161 0 1998 184 107 32 chr17 80857004 80857065 -4581415 + MLT1F LTR MaLR 487 542 0 2219 119 3 0 chr17 80857211 80857523 -4580957 - AluSp SINE Alu 0 313 1 2252 126 49 6 chr17 80858118 80858467 -4580013 + THE1B LTR MaLR 1 364 0 349 297 80 96 chr17 80858642 80858996 -4579484 + L1M4c LINE L1 2768 3949 -3008 1155 238 92 22 chr17 80859019 80859210 -4579270 - L1ME2 LINE L1 -1 6163 5987 2067 136 0 19 chr17 80859210 80859567 -4578913 - AluSx SINE Alu 0 312 1 1155 238 92 22 chr17 80859567 80859833 -4578647 - L1ME2 LINE L1 -177 5987 5674 250 322 66 97 chr17 80859895 80860122 -4578358 + L2 LINE L2 3033 3252 -20 950 269 34 42 chr17 80861220 80861984 -4576496 + L1MCc LINE L1 1129 1894 -4887 316 204 0 92 chr17 80861991 80862032 -4576448 - MSTA LTR MaLR 0 428 385 2100 97 17 3 chr17 80862032 80862321 -4576159 + AluSg SINE Alu 1 293 -17 316 204 0 92 chr17 80862321 80862377 -4576103 - MSTA LTR MaLR -43 385 340 228 228 33 156 chr17 80862393 80862573 -4575907 + L2 LINE L2 3069 3226 -46 389 319 157 6 chr17 80862724 80862890 -4575590 + MIR SINE MIR 2 192 -70 333 241 0 0 chr17 80863104 80863216 -4575264 + (ATG)n Simple_repeat Simple_repeat 1 112 0 750 182 0 0 chr17 80863263 80863422 -4575058 + (ATG)n Simple_repeat Simple_repeat 3 161 0 528 224 6 22 chr17 80863438 80863621 -4574859 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 * 776 209 8 0 chr17 80863579 80864100 -4574380 + (ATG)n Simple_repeat Simple_repeat 1 525 0 892 245 43 10 chr17 80864120 80864328 -4574152 - MIR SINE MIR 0 262 48 182 308 165 11 chr17 80865051 80865142 -4573338 + MIR SINE MIR 42 146 -62 893 141 20 0 chr17 80865460 80865609 -4572871 - FRAM SINE Alu -32 144 1 1549 148 0 82 chr17 80866964 80867091 -4571389 + AluJo SINE Alu 1 137 -175 2086 105 3 41 chr17 80867091 80867406 -4571074 - AluSq SINE Alu -10 303 1 1549 148 0 82 chr17 80867406 80867582 -4570898 + AluJo SINE Alu 137 279 -33 22 35 0 0 chr17 80868077 80868106 -4570374 + AT_rich Low_complexity Low_complexity 1 29 0 276 200 0 0 chr17 80868251 80868311 -4570169 + L1ME4a LINE L1 6060 6119 -2 251 143 0 18 chr17 80868748 80868804 -4569676 + (GGGGA)n Simple_repeat Simple_repeat 3 57 0 2347 103 0 0 chr17 80869263 80869575 -4568905 + AluSx SINE Alu 1 312 0 537 236 18 0 chr17 80870061 80870171 -4568309 - MER81 DNA DNA -1 113 2 234 271 144 17 chr17 80870801 80870919 -4567561 - MIR3 SINE MIR -72 136 4 533 219 55 135 chr17 80870998 80871377 -4567103 + MLT1C LTR MaLR 42 467 0 1838 145 45 3 chr17 80871621 80871910 -4566570 + AluJb SINE Alu 1 301 -11 2281 96 0 3 chr17 80872201 80872503 -4565977 - AluSg SINE Alu -9 301 1 803 191 289 19 chr17 80875451 80875776 -4562704 - MER96B DNA MER1_type? -4 413 1 2248 93 0 63 chr17 80876014 80876347 -4562133 - AluSx SINE Alu 0 312 1 806 197 101 118 chr17 80876592 80876794 -4561686 + L1MB8 LINE L1 5730 5934 -244 2241 110 0 0 chr17 80876794 80877102 -4561378 + AluJb SINE Alu 1 308 -4 806 197 101 118 chr17 80877102 80877304 -4561176 + L1MB8 LINE L1 5934 6129 -49 2105 81 15 0 chr17 80877304 80877600 -4560880 + AluSp SINE Alu 8 307 0 806 197 101 118 chr17 80877600 80877650 -4560830 + L1MB8 LINE L1 6129 6178 0 234 207 0 0 chr17 80877678 80877736 -4560744 + A-rich Low_complexity Low_complexity 1 58 0 498 365 62 23 chr17 80878244 80878548 -4559932 + L1M4 LINE L1 3364 3679 -2467 297 0 0 0 chr17 80878549 80878582 -4559898 + (CA)n Simple_repeat Simple_repeat 1 33 0 593 324 62 49 chr17 80878635 80878934 -4559546 + L1M4 LINE L1 4958 5264 -882 1735 160 39 0 chr17 80878934 80879215 -4559265 - AluJo SINE Alu -20 292 1 593 324 62 49 chr17 80879215 80879285 -4559195 + L1M4 LINE L1 5264 5332 -814 2340 95 0 0 chr17 80879516 80879820 -4558660 - AluSx SINE Alu -7 305 2 195 42 0 0 chr17 80880100 80880124 -4558356 + (T)n Simple_repeat Simple_repeat 1 24 0 2205 101 0 3 chr17 80880134 80880431 -4558049 + AluSg SINE Alu 1 296 -14 616 110 0 0 chr17 80880431 80880522 -4557958 - HY1 scRNA scRNA -21 91 1 307 220 46 37 chr17 80880579 80880688 -4557792 + MER34 LTR ERV1 429 538 -4 238 362 19 19 chr17 80880976 80881081 -4557399 + MIR SINE MIR 66 170 -92 312 294 34 10 chr17 80881756 80881875 -4556605 + MIR SINE MIR 34 156 -52 2252 98 0 10 chr17 80882176 80882482 -4555998 + AluSx SINE Alu 1 303 -9 373 279 120 25 chr17 80883432 80883590 -4554890 + MIR3 SINE MIR 22 194 -14 572 238 191 5 chr17 80883831 80884041 -4554439 - MLT1D LTR MaLR -1 504 256 548 250 45 11 chr17 80884074 80884250 -4554230 - MLT1D LTR MaLR -323 182 1 262 308 0 0 chr17 80884271 80884349 -4554131 + MIR SINE MIR 11 88 -174 432 252 69 44 chr17 80885497 80885656 -4552824 + MIR3 SINE MIR 3 165 -43 364 224 94 0 chr17 80887282 80887367 -4551113 + MIR SINE MIR 61 153 -55 763 280 17 29 chr17 80887382 80887621 -4550859 + MIR SINE MIR 11 246 -16 248 261 15 0 chr17 80889503 80889568 -4548912 + MLT1L LTR MaLR 540 605 -10 194 380 62 0 chr17 80889931 80890060 -4548420 - MIR SINE MIR -37 225 89 367 271 186 11 chr17 80890335 80890512 -4547968 - MIR SINE MIR -34 228 21 1854 147 27 7 chr17 80890777 80891077 -4547403 - AluJb SINE Alu -6 306 1 410 297 69 0 chr17 80891107 80891252 -4547228 + L1ME4a LINE L1 5918 6072 -49 1531 133 129 19 chr17 80891299 80891570 -4546910 - AluJo SINE Alu 0 302 2 2214 122 0 0 chr17 80891612 80891923 -4546557 - AluSx SINE Alu -1 311 1 214 286 39 13 chr17 80893427 80893504 -4544976 + (CCCCAG)n Simple_repeat Simple_repeat 6 84 0 231 264 85 101 chr17 80893966 80894095 -4544385 + MIR3 SINE MIR 79 205 -3 342 256 33 0 chr17 80894450 80894540 -4543940 + MIR SINE MIR 29 121 -141 304 244 0 23 chr17 80895680 80895766 -4542714 + L2 LINE L2 3016 3099 -173 319 227 157 42 chr17 80895913 80896129 -4542351 - L2 LINE L2 -234 3079 2839 219 270 81 24 chr17 80896700 80896830 -4541650 - MIR SINE MIR -60 148 34 375 257 71 9 chr17 80897848 80897961 -4540519 - MIR SINE MIR -70 192 73 550 343 39 9 chr17 80898311 80898544 -4539936 + MIR SINE MIR 23 262 0 2068 124 0 7 chr17 80899301 80899599 -4538881 + AluSx SINE Alu 1 296 -16 248 315 101 7 chr17 80899723 80899872 -4538608 + MER5A DNA MER1_type 1 163 -26 1577 172 10 30 chr17 80900480 80900776 -4537704 + AluJb SINE Alu 1 290 -22 445 223 85 23 chr17 80901603 80901733 -4536747 + MIR SINE MIR 23 160 -102 2137 118 0 0 chr17 80903997 80904293 -4534187 + AluSx SINE Alu 1 296 -16 437 306 144 6 chr17 80905444 80905624 -4532856 - MIR SINE MIR -41 221 17 216 267 50 0 chr17 80905635 80905695 -4532785 - MIR SINE MIR -81 181 119 300 200 143 0 chr17 80906418 80906488 -4531992 + MER96B DNA MER1_type? 5 84 -333 521 154 0 0 chr17 80906676 80906754 -4531726 - AluS SINE Alu -234 78 1 1415 120 0 0 chr17 80906754 80906963 -4531517 - MER75 DNA T2_type -305 209 1 315 236 28 0 chr17 80906963 80907035 -4531445 + MLT2B1 LTR ERVL 112 185 -279 590 270 42 49 chr17 80907039 80907361 -4531119 + MER34 LTR ERV1 6 533 -174 1793 144 34 0 chr17 80907373 80907665 -4530815 + AluSx SINE Alu 1 302 -10 1337 108 5 0 chr17 80907731 80907916 -4530564 + AluJo SINE Alu 1 186 -126 705 96 0 39 chr17 80907970 80908074 -4530406 + AluJb SINE Alu 198 297 -15 546 215 70 25 chr17 80908083 80908241 -4530239 + MER34 LTR ERV1 371 535 -7 872 240 39 84 chr17 80908285 80908644 -4529836 + MLT2B1 LTR ERVL 178 520 0 439 223 11 0 chr17 80908647 80908741 -4529739 + L1MB7 LINE L1 6087 6181 -3 2236 109 0 3 chr17 80908979 80909292 -4529188 - AluSx SINE Alu 0 312 1 1800 151 164 16 chr17 80910161 80910339 -4528141 + MSTB LTR MaLR 1 151 -275 1701 102 121 11 chr17 80910339 80910603 -4527877 + AluSg SINE Alu 1 293 -17 1800 151 164 16 chr17 80910603 80910795 -4527685 + MSTB LTR MaLR 151 426 0 280 365 44 11 chr17 80911652 80911833 -4526647 - MIR SINE MIR -10 252 66 21 0 0 0 chr17 80912406 80912427 -4526053 + AT_rich Low_complexity Low_complexity 1 21 0 190 284 114 11 chr17 80913175 80913263 -4525217 - MIR SINE MIR -138 124 28 2180 97 10 7 chr17 80916692 80916991 -4521489 - AluSq SINE Alu -13 300 1 211 328 103 17 chr17 80920315 80920431 -4518049 + MIR SINE MIR 20 145 -63 2025 115 0 0 chr17 80921231 80921510 -4516970 + AluSx SINE Alu 1 279 -33 195 42 0 0 chr17 80921516 80921540 -4516940 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 975 211 64 24 chr17 80921547 80921798 -4516682 - MER33 DNA MER1_type -63 261 1 932 119 5 129 chr17 80921813 80922023 -4516457 - AluSg/x SINE Alu -9 303 120 477 0 0 0 chr17 80924322 80924375 -4514105 + (TG)n Simple_repeat Simple_repeat 1 53 0 2048 185 37 25 chr17 80925078 80925515 -4512965 + L1MB7 LINE L1 5647 6088 -96 532 159 8 87 chr17 80925515 80925538 -4512942 + MLT2B1 LTR ERVL 1 24 -496 2295 41 41 17 chr17 80925538 80925829 -4512651 + AluY SINE Alu 1 298 -13 532 159 8 87 chr17 80925829 80925931 -4512549 + MLT2B1 LTR ERVL 24 116 -404 1759 97 65 42 chr17 80925931 80926053 -4512427 - MER75 DNA T2_type 0 514 396 2017 121 6 13 chr17 80926053 80926367 -4512113 + AluSx SINE Alu 1 312 0 1759 97 65 42 chr17 80926367 80926554 -4511926 - MER75 DNA T2_type -118 396 198 1391 144 0 17 chr17 80926555 80926791 -4511689 - AluSg/x SINE Alu 0 312 81 2228 102 0 0 chr17 80928414 80928718 -4509762 + AluSx SINE Alu 1 304 -8 1010 173 101 0 chr17 80929225 80929433 -4509047 + L1MB5 LINE L1 5946 6174 0 1072 194 220 53 chr17 80929578 80929688 -4508792 + MLT1D LTR MaLR 63 153 -352 2110 107 35 0 chr17 80929688 80929978 -4508502 + AluSx SINE Alu 1 300 -12 1072 194 220 53 chr17 80929978 80930244 -4508236 + MLT1D LTR MaLR 153 502 -3 219 191 48 0 chr17 80930789 80930831 -4507649 + (CACG)n Simple_repeat Simple_repeat 4 47 0 217 373 55 24 chr17 80931336 80931591 -4506889 + L2 LINE L2 1643 1905 -1409 2136 115 0 16 chr17 80932515 80932828 -4505652 - AluSx SINE Alu -4 308 1 2268 111 0 0 chr17 80933442 80933748 -4504732 - AluSx SINE Alu -6 306 1 195 42 0 0 chr17 80933807 80933831 -4504649 + (T)n Simple_repeat Simple_repeat 1 24 0 2103 111 0 3 chr17 80933841 80934138 -4504342 + AluSg SINE Alu 1 296 -14 415 204 11 0 chr17 80934138 80934226 -4504254 - HY1 scRNA scRNA -21 91 3 384 339 45 13 chr17 80935035 80935259 -4503221 + MIR SINE MIR 4 234 -28 1714 126 93 4 chr17 80936313 80936591 -4501889 - AluSx SINE Alu -9 303 1 1660 150 45 7 chr17 80936593 80936879 -4501601 - AluJo SINE Alu -15 297 1 374 112 34 11 chr17 80936963 80937052 -4501428 + (TG)n Simple_repeat Simple_repeat 1 91 0 224 561 0 0 chr17 80938030 80938096 -4500384 + C-rich Low_complexity Low_complexity 1 66 0 303 253 0 63 chr17 80938992 80939182 -4499298 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 284 249 5 63 chr17 80939224 80939413 -4499067 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 3424 221 94 55 chr17 80939462 80940400 -4498080 - L1M4 LINE L1 -1298 4848 3832 1690 155 10 36 chr17 80940400 80940704 -4497776 - AluJo SINE Alu -10 302 7 3424 221 94 55 chr17 80940704 80941208 -4497272 - L1M4 LINE L1 -2314 3832 3349 14424 124 26 18 chr17 80941220 80941316 -4497164 - Tigger1 DNA MER2_type -23 2395 2301 2055 138 3 0 chr17 80941316 80941614 -4496866 + AluSx SINE Alu 1 299 -13 14424 124 26 18 chr17 80941614 80941807 -4496673 - Tigger1 DNA MER2_type -117 2301 2111 2425 87 0 0 chr17 80941807 80942119 -4496361 - AluSx SINE Alu 0 312 1 14424 124 26 18 chr17 80942119 80942915 -4495565 - Tigger1 DNA MER2_type -307 2111 1323 2041 132 7 0 chr17 80942915 80943210 -4495270 - AluSx SINE Alu -15 297 1 2065 130 0 16 chr17 80943213 80943529 -4494951 - AluSx SINE Alu -1 311 1 2204 103 0 13 chr17 80943530 80943841 -4494639 - AluSx SINE Alu -5 307 1 14424 124 26 18 chr17 80943841 80944895 -4493585 - Tigger1 DNA MER2_type -1096 1322 278 2250 75 0 33 chr17 80944895 80945200 -4493280 + AluSx SINE Alu 3 297 -15 2371 56 26 3 chr17 80945201 80945505 -4492975 + AluY SINE Alu 1 311 0 14424 124 26 18 chr17 80945505 80945710 -4492770 - Tigger1 DNA MER2_type -2139 279 22 259 290 135 20 chr17 80945733 80945933 -4492547 - L1P LINE L1 -2817 3329 3107 347 208 10 50 chr17 80945943 80946044 -4492436 - LTR41 LTR ERVL -6 767 671 3249 229 33 42 chr17 80946062 80946091 -4492389 + MER21B LTR ERV1 1 29 -834 1690 163 3 7 chr17 80946091 80946379 -4492101 + AluJb SINE Alu 1 287 -25 438 69 0 0 chr17 80946385 80946443 -4492037 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 3249 229 33 42 chr17 80946443 80947266 -4491214 + MER21B LTR ERV1 34 852 -11 262 184 0 0 chr17 80947276 80947325 -4491155 - LTR41 LTR ERVL -105 668 620 4711 172 48 10 chr17 80947325 80948089 -4490391 + L1MB3 LINE L1 5038 5848 -335 2302 94 7 0 chr17 80948089 80948396 -4490084 + AluSx SINE Alu 1 309 -3 4711 172 48 10 chr17 80948396 80948730 -4489750 + L1MB3 LINE L1 5848 6168 -15 450 312 46 46 chr17 80948981 80949305 -4489175 - LTR41 LTR ERVL -449 324 1 364 0 59 0 chr17 80949318 80949369 -4489111 + (TTTTG)n Simple_repeat Simple_repeat 1 54 0 1911 90 34 8 chr17 80949377 80949643 -4488837 - AluSx SINE Alu -39 273 1 1800 218 76 68 chr17 80949645 80950157 -4488323 - L1MEc LINE L1 -3059 3156 2649 1409 211 160 3 chr17 80950157 80950470 -4488010 + MLT1A1 LTR MaLR 1 362 -3 1800 218 76 68 chr17 80950470 80950497 -4487983 - L1MEc LINE L1 -3566 2649 2624 2409 74 0 0 chr17 80950497 80950795 -4487685 + AluSq SINE Alu 3 300 -13 1800 218 76 68 chr17 80950795 80951019 -4487461 - L1MEc LINE L1 -3591 2624 2386 1988 151 8 11 chr17 80951068 80951420 -4487060 + MER47A DNA MER2_type 14 364 -2 2262 281 45 25 chr17 80951421 80951688 -4486792 - L1MEc LINE L1 -3848 2383 2123 2296 100 0 3 chr17 80951688 80951999 -4486481 - AluSx SINE Alu -2 310 1 2262 281 45 25 chr17 80951999 80952485 -4485995 - L1MEc LINE L1 -4108 2123 1630 1907 127 6 67 chr17 80952485 80952816 -4485664 - AluSx SINE Alu -1 311 1 2262 281 45 25 chr17 80952816 80953020 -4485460 - L1MEc LINE L1 -4601 1630 1431 464 271 37 65 chr17 80953028 80953242 -4485238 - L1MEc LINE L1 -5853 352 145 234 0 0 0 chr17 80954010 80954036 -4484444 + (TG)n Simple_repeat Simple_repeat 2 27 0 235 240 13 20 chr17 80954337 80954487 -4483993 + (TG)n Simple_repeat Simple_repeat 1 149 0 320 0 25 0 chr17 80954620 80954660 -4483820 + (CA)n Simple_repeat Simple_repeat 1 41 0 1549 191 58 97 chr17 80955438 80955505 -4482975 - MLT1C LTR MaLR 0 467 399 2372 72 0 31 chr17 80955505 80955825 -4482655 + AluY SINE Alu 1 310 -1 1549 191 58 97 chr17 80955825 80956062 -4482418 - MLT1C LTR MaLR -68 399 186 1574 163 62 7 chr17 80956062 80956350 -4482130 - AluJb SINE Alu -8 304 1 1549 191 58 97 chr17 80956350 80956527 -4481953 - MLT1C LTR MaLR -281 186 4 528 358 68 28 chr17 80956587 80956942 -4481538 + L3 LINE CR1 1134 1502 -75 667 236 40 0 chr17 80957555 80957703 -4480777 - MIR SINE MIR -22 240 87 404 235 61 9 chr17 80958308 80958423 -4480057 - MIR SINE MIR -122 140 20 2455 58 0 0 chr17 80959102 80959396 -4479084 + AluY SINE Alu 1 294 -17 221 233 33 156 chr17 80959468 80959648 -4478832 + L2 LINE L2 3069 3226 -46 389 319 157 6 chr17 80959799 80959965 -4478515 + MIR SINE MIR 2 192 -70 333 241 0 0 chr17 80960179 80960291 -4478189 + (ATG)n Simple_repeat Simple_repeat 1 112 0 750 182 0 0 chr17 80960338 80960497 -4477983 + (ATG)n Simple_repeat Simple_repeat 3 161 0 507 229 6 22 chr17 80960513 80960696 -4477784 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 * 830 205 8 0 chr17 80960654 80961196 -4477284 + (ATG)n Simple_repeat Simple_repeat 1 546 0 901 245 43 10 chr17 80961216 80961424 -4477056 - MIR SINE MIR 0 262 48 183 303 180 0 chr17 80962147 80962236 -4476244 + MIR SINE MIR 42 146 -62 893 141 20 0 chr17 80962554 80962703 -4475777 - FRAM SINE Alu -32 144 1 1649 156 0 35 chr17 80964057 80964184 -4474296 + AluJo SINE Alu 1 131 -181 2109 102 3 41 chr17 80964184 80964499 -4473981 - AluSq SINE Alu -10 303 1 1649 156 0 35 chr17 80964499 80964660 -4473820 + AluJo SINE Alu 131 279 -33 22 35 0 0 chr17 80965155 80965184 -4473296 + AT_rich Low_complexity Low_complexity 1 29 0 276 200 0 0 chr17 80965329 80965389 -4473091 + L1ME4a LINE L1 6060 6119 -2 251 143 0 18 chr17 80965826 80965882 -4472598 + (GGGGA)n Simple_repeat Simple_repeat 3 57 0 2347 103 0 0 chr17 80966341 80966653 -4471827 + AluSx SINE Alu 1 312 0 537 236 18 0 chr17 80967139 80967249 -4471231 - MER81 DNA DNA -1 113 2 234 271 144 17 chr17 80967878 80967996 -4470484 - MIR3 SINE MIR -72 136 4 533 219 55 135 chr17 80968075 80968454 -4470026 + MLT1C LTR MaLR 42 467 0 1867 146 45 0 chr17 80968698 80968986 -4469494 + AluJb SINE Alu 1 301 -11 2272 96 0 3 chr17 80969277 80969578 -4468902 - AluSg SINE Alu -10 300 1 2198 113 10 0 chr17 80974384 80974693 -4463787 + AluSq SINE Alu 2 313 0 217 235 51 61 chr17 80974698 80974796 -4463684 - MIR SINE MIR -133 129 33 449 192 91 0 chr17 80975096 80975195 -4463285 + MIR SINE MIR 90 197 -65 219 240 0 20 chr17 80976204 80976254 -4462226 - MIR SINE MIR -118 144 96 788 229 73 94 chr17 80976431 80976633 -4461847 + MLT1C LTR MaLR 6 211 -256 2165 108 3 16 chr17 80976633 80976948 -4461532 + AluSx SINE Alu 1 311 -1 788 229 73 94 chr17 80976948 80977213 -4461267 + MLT1C LTR MaLR 211 463 -4 283 278 19 56 chr17 80977295 80977403 -4461077 - MIR SINE MIR -87 121 18 222 265 41 51 chr17 80978668 80978766 -4459714 + MER5B DNA MER1_type 65 161 -17 2266 71 30 7 chr17 80978882 80979179 -4459301 - AluSx SINE Alu -8 304 1 1710 146 69 0 chr17 80979212 80979486 -4458994 + AluJb SINE Alu 1 293 -19 464 288 75 12 chr17 80983709 80983869 -4454611 + MIR SINE MIR 34 203 -59 187 106 82 12 chr17 80984010 80984095 -4454385 + (CA)n Simple_repeat Simple_repeat 2 92 0 323 158 32 11 chr17 80984127 80984222 -4454258 + (CA)n Simple_repeat Simple_repeat 1 97 0 1711 143 45 7 chr17 80984306 80984592 -4453888 + AluJo SINE Alu 1 297 -15 1696 137 93 4 chr17 80984594 80984872 -4453608 + AluSx SINE Alu 1 303 -9 274 137 14 41 chr17 80985151 80985224 -4453256 + (CACCAT)n Simple_repeat Simple_repeat 5 75 0 607 170 29 16 chr17 80985253 80985606 -4452874 + (CACCAT)n Simple_repeat Simple_repeat 1 357 0 774 175 0 0 chr17 80985751 80985928 -4452552 + (CCA)n Simple_repeat Simple_repeat 3 179 0 951 161 0 0 chr17 80985945 80986125 -4452355 + (CCA)n Simple_repeat Simple_repeat 1 180 0 767 156 22 21 chr17 80986132 80986415 -4452065 + (CACCAT)n Simple_repeat Simple_repeat 1 283 0 263 258 25 92 chr17 80986498 80986618 -4451862 - MIR SINE MIR -63 145 34 188 336 208 0 chr17 80987512 80987661 -4450819 + MIR SINE MIR 13 192 -70 247 200 14 114 chr17 80988504 80988574 -4449906 - MIR SINE MIR -110 152 90 2186 210 39 23 chr17 80991417 80991761 -4446719 - L1MB2 LINE L1 -29 6142 5784 2285 74 14 3 chr17 80991761 80992057 -4446423 - AluSp SINE Alu -14 299 1 2186 210 39 23 chr17 80992057 80992274 -4446206 - L1MB2 LINE L1 -387 5784 5572 398 246 127 0 chr17 80992274 80992392 -4446088 + MER3 DNA MER1_type 77 209 0 260 290 80 0 chr17 80992395 80992495 -4445985 - MIR3 SINE MIR -49 159 52 303 186 0 0 chr17 80992638 80992697 -4445783 - L1M3 LINE L1 -473 5707 5649 227 313 25 0 chr17 80992697 80992777 -4445703 - MER94 DNA DNA -52 82 1 1235 276 88 0 chr17 80993023 80993422 -4445058 + L1MB5 LINE L1 5733 6166 -8 217 159 32 32 chr17 80993433 80993496 -4444984 + GA-rich Low_complexity Low_complexity 4 66 0 689 200 12 36 chr17 80993497 80993662 -4444818 + L1PA7 LINE L1 5991 6151 -3 870 139 0 8 chr17 80995568 80995697 -4442783 - FLAM_C SINE Alu -5 128 1 692 263 19 24 chr17 80995697 80995892 -4442588 - MIR SINE MIR -34 228 33 195 162 0 0 chr17 80996723 80996760 -4441720 - L2 LINE L2 0 3313 3277 768 105 0 0 chr17 80997082 80997187 -4441293 + FLAM_C SINE Alu 34 138 -5 768 235 1 0 chr17 80999842 81000656 -4437824 + (TGGA)n Simple_repeat Simple_repeat 1 815 0 593 234 0 11 chr17 81000660 81000835 -4437645 + (TGGG)n Simple_repeat Simple_repeat 4 176 0 195 332 115 53 chr17 81001183 81001791 -4436689 + L2 LINE L2 1946 2591 -723 704 249 67 19 chr17 81001889 81002098 -4436382 + MIR SINE MIR 39 257 -5 2294 61 0 0 chr17 81002284 81002598 -4435882 - AluY SINE Alu 0 314 1 228 67 0 0 chr17 81002704 81002734 -4435746 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 630 206 0 56 chr17 81004267 81004447 -4434033 - AluSq SINE Alu -139 174 5 1859 114 35 54 chr17 81004717 81005033 -4433447 + AluSq SINE Alu 1 310 -3 1051 113 6 6 chr17 81005317 81005476 -4433004 - AluSg/x SINE Alu -14 298 140 245 309 48 0 chr17 81008188 81008272 -4430208 - MIR SINE MIR -62 146 59 1938 152 3 7 chr17 81009111 81009420 -4429060 - AluJb SINE Alu -4 308 1 2096 96 25 38 chr17 81009451 81009765 -4428715 + AluSg SINE Alu 1 310 0 1835 158 0 10 chr17 81011883 81012186 -4426294 + AluJb SINE Alu 11 310 -2 2191 198 20 26 chr17 81012209 81012664 -4425816 + L1MB3 LINE L1 5730 6181 -2 1975 92 89 0 chr17 81014676 81014957 -4423523 - AluSx SINE Alu -6 306 1 240 351 60 22 chr17 81015214 81015348 -4423132 - MIR SINE MIR -89 173 35 481 245 54 20 chr17 81016080 81016227 -4422253 - Charlie8 DNA MER1_type -2198 219 68 1405 138 18 0 chr17 81016227 81016452 -4422028 + AluSg/x SINE Alu 83 311 -1 199 333 0 0 chr17 81016780 81016843 -4421637 - MIR SINE MIR -89 173 111 1941 155 0 3 chr17 81018146 81018450 -4420030 + AluJo SINE Alu 1 303 -9 2065 103 0 40 chr17 81018460 81018761 -4419719 + AluSx SINE Alu 2 290 -22 1114 254 68 36 chr17 81018885 81019326 -4419154 + MLT1C LTR MaLR 7 461 -6 468 225 118 1 chr17 81020421 81020565 -4417915 + L1ME LINE L1 5591 5750 -383 2353 66 7 7 chr17 81020870 81021175 -4417305 - AluY SINE Alu -6 305 1 789 150 15 15 chr17 81021207 81021340 -4417140 + FLAM_C SINE Alu 1 133 0 2170 88 14 0 chr17 81022535 81022845 -4415635 + AluSp SINE Alu 1 314 0 489 288 116 24 chr17 81023106 81023356 -4415124 + LTR16C LTR ERVL 214 486 -5 842 222 29 71 chr17 81024760 81025071 -4413409 + MLT1C LTR MaLR 1 298 -169 321 269 59 0 chr17 81025460 81025579 -4412901 - MER94 DNA DNA -8 126 1 2585 24 0 0 chr17 81025670 81025968 -4412512 + AluY SINE Alu 1 298 -13 1157 71 0 0 chr17 81026054 81026208 -4412272 - AluY SINE Alu -10 301 148 368 360 85 18 chr17 81026581 81026853 -4411627 + L3b LINE CR1 1288 1577 -6 252 0 0 0 chr17 81027586 81027614 -4410866 + (A)n Simple_repeat Simple_repeat 1 28 0 1016 185 106 170 chr17 81028923 81029328 -4409152 + MLT1C LTR MaLR 6 389 -6 306 255 104 0 chr17 81030358 81030464 -4408016 + MIR3 SINE MIR 89 205 -3 192 77 0 0 chr17 81030858 81030884 -4407596 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 922 120 0 0 chr17 81030901 81031026 -4407454 + AluSq/x SINE Alu 1 125 -188 844 124 55 7 chr17 81031108 81031253 -4407227 + AluSq SINE Alu 151 302 -11 716 122 0 0 chr17 81031257 81031355 -4407125 - FLAM_C SINE Alu -32 111 14 339 232 137 0 chr17 81031384 81031479 -4407001 - L1ME4a LINE L1 -1 6120 6013 414 0 0 0 chr17 81031529 81031575 -4406905 + (TG)n Simple_repeat Simple_repeat 2 47 0 268 314 19 33 chr17 81031704 81031849 -4406631 - MER5A DNA MER1_type -2 176 34 217 284 45 45 chr17 81032349 81032437 -4406043 + L2 LINE L2 3205 3292 -21 302 275 64 0 chr17 81032505 81032614 -4405866 - MIR SINE MIR -108 154 39 318 298 10 29 chr17 81033015 81033119 -4405361 + MIR SINE MIR 157 258 -4 447 137 0 0 chr17 81033217 81033290 -4405190 + (GGGA)n Simple_repeat Simple_repeat 3 75 0 2345 92 0 3 chr17 81034089 81034403 -4404077 + AluSq SINE Alu 1 313 0 219 290 58 0 chr17 81034529 81034598 -4403882 + L2 LINE L2 3200 3272 0 300 270 0 0 chr17 81036142 81036231 -4402249 + G-rich Low_complexity Low_complexity 1 89 0 232 309 118 13 chr17 81038016 81038168 -4400312 - MIR SINE MIR -30 232 65 28 29 0 0 chr17 81042752 81042787 -4395693 + GC_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr17 81043034 81043088 -4395392 + GC_rich Low_complexity Low_complexity 1 54 0 39 50 0 0 chr17 81043160 81043220 -4395260 + GC_rich Low_complexity Low_complexity 1 60 0 734 299 63 30 chr17 81045323 81045624 -4392856 - L3b LINE CR1 -124 1459 1149 1057 271 86 3 chr17 81045985 81046357 -4392123 + MLT1C LTR MaLR 59 461 -6 387 280 72 0 chr17 81046930 81047055 -4391425 + L2 LINE L2 2370 2503 -811 933 226 22 85 chr17 81047107 81047230 -4391250 + MER63B DNA MER1_type 1 130 -932 1930 135 34 0 chr17 81047230 81047526 -4390954 - AluSx SINE Alu -6 306 1 933 226 22 85 chr17 81047526 81047765 -4390715 + MER63B DNA MER1_type 130 340 -96 1909 151 110 37 chr17 81047829 81047874 -4390606 - L1MB3 LINE L1 -3 6180 6140 2331 97 0 0 chr17 81047874 81048185 -4390295 + AluSx SINE Alu 1 311 -1 1909 151 110 37 chr17 81048185 81048622 -4389858 - L1MB3 LINE L1 -43 6140 5663 258 41 41 20 chr17 81048622 81048671 -4389809 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2047 106 0 0 chr17 81048677 81048952 -4389528 - AluSx SINE Alu -37 275 1 383 258 0 47 chr17 81050877 81051005 -4387475 - L3 LINE CR1 -56 1521 1400 323 151 34 55 chr17 81051025 81051171 -4387309 + GA-rich Low_complexity Low_complexity 4 146 0 2374 97 0 0 chr17 81052798 81053109 -4385371 + AluSx SINE Alu 1 311 -1 411 287 92 19 chr17 81053420 81053681 -4384799 + L2 LINE L2 2813 3092 -180 2415 35 0 0 chr17 81054555 81054867 -4383613 + AluY SINE Alu 1 312 0 2220 94 0 13 chr17 81055263 81055571 -4382909 + AluSx SINE Alu 1 304 -8 2275 73 27 0 chr17 81055631 81055932 -4382548 + AluY SINE Alu 1 309 -2 625 184 0 0 chr17 81055974 81056088 -4382392 + MER63A DNA MER1_type 52 165 -45 2058 116 27 0 chr17 81056307 81056599 -4381881 - AluSq SINE Alu -9 304 5 1702 149 20 26 chr17 81056672 81056974 -4381506 - AluJo SINE Alu -11 301 2 970 252 59 28 chr17 81057192 81057513 -4380967 + MLT1J LTR MaLR 1 331 -180 1932 133 0 54 chr17 81057816 81058147 -4380333 - AluSq SINE Alu 0 313 1 408 274 173 24 chr17 81058290 81058498 -4379982 + MIR SINE MIR 24 262 0 298 368 35 0 chr17 81058511 81058625 -4379855 - MIR SINE MIR -110 152 35 959 196 0 0 chr17 81058706 81058869 -4379611 + FRAM SINE Alu 1 162 -14 319 343 44 7 chr17 81058987 81059124 -4379356 + L1MC4 LINE L1 7900 8041 -1 329 131 16 0 chr17 81059800 81059861 -4378619 + G-rich Low_complexity Low_complexity 2 63 0 200 308 26 0 chr17 81059885 81059963 -4378517 + G-rich Low_complexity Low_complexity 3 82 0 1953 216 128 40 chr17 81060063 81060953 -4377527 + L1ME LINE L1 3878 4845 -1301 314 253 0 63 chr17 81061006 81061196 -4377284 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 303 253 0 63 chr17 81061238 81061428 -4377052 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 483 229 31 48 chr17 81061604 81061831 -4376649 + L1ME LINE L1 4837 5059 -1087 * 681 246 56 3 chr17 81061809 81062093 -4376387 + L1ME LINE L1 4980 5278 -868 2444 59 0 3 chr17 81062106 81062409 -4376071 - AluY SINE Alu -9 302 1 253 269 15 31 chr17 81062600 81062730 -4375750 + L1ME LINE L1 5304 5431 -731 * 930 223 88 40 chr17 81062703 81063024 -4375456 + L1ME2 LINE L1 4865 5169 -995 763 203 0 0 chr17 81063024 81063157 -4375323 + FLAM_C SINE Alu 1 133 0 930 223 88 40 chr17 81063157 81064014 -4374466 + L1ME2 LINE L1 5169 6154 -10 352 306 52 83 chr17 81064054 81064240 -4374240 + L1MC4 LINE L1 7821 8000 -42 1906 158 0 10 chr17 81064240 81064557 -4373923 - AluJb SINE Alu 0 312 1 352 306 52 83 chr17 81064557 81064599 -4373881 + L1MC4 LINE L1 8000 8042 0 842 158 8 0 chr17 81065345 81065478 -4373002 - AluJo SINE Alu -178 134 1 183 139 0 0 chr17 81067135 81067171 -4371309 + (CAGGG)n Simple_repeat Simple_repeat 1 36 0 692 292 135 5 chr17 81067384 81067866 -4370614 + L2 LINE L2 2753 3297 -16 2188 107 0 0 chr17 81067875 81068174 -4370306 + AluSx SINE Alu 1 299 -13 2198 168 101 5 chr17 81069494 81069940 -4368540 - MER21B LTR ERV1 -374 489 1 453 291 106 49 chr17 81069941 81070329 -4368151 + L2 LINE L2 2863 3272 0 1314 207 46 29 chr17 81071208 81071422 -4367058 + L1M3 LINE L1 4965 5174 -1006 2247 108 0 0 chr17 81071422 81071719 -4366761 + AluSx SINE Alu 3 299 -13 1314 207 46 29 chr17 81071719 81071999 -4366481 + L1M3 LINE L1 5174 5462 -718 1179 230 78 49 chr17 81072209 81072657 -4365823 + MLT1C LTR MaLR 7 467 0 334 206 0 0 chr17 81073844 81073912 -4364568 - MIR SINE MIR -60 148 81 245 276 26 13 chr17 81074375 81074451 -4364029 + MIR3 SINE MIR 106 182 -26 2283 62 38 0 chr17 81074834 81075125 -4363355 + AluY SINE Alu 1 302 -9 216 158 0 0 chr17 81075612 81075650 -4362830 + (CA)n Simple_repeat Simple_repeat 2 39 0 225 0 0 0 chr17 81076284 81076309 -4362171 + (TCC)n Simple_repeat Simple_repeat 2 26 0 584 285 41 38 chr17 81078004 81078323 -4360157 + MLT1D LTR MaLR 7 326 -179 698 144 0 0 chr17 81078332 81078443 -4360037 - Charlie3 DNA MER1_type -8 2702 2592 1810 111 0 0 chr17 81078443 81078711 -4359769 - AluSg SINE Alu 0 305 38 315 0 0 0 chr17 81078811 81078846 -4359634 + (TG)n Simple_repeat Simple_repeat 2 36 0 1905 117 44 0 chr17 81078846 81079119 -4359361 - AluSx SINE Alu -27 285 1 729 149 66 0 chr17 81079593 81079714 -4358766 + FLAM_C SINE Alu 2 130 -3 1515 100 4 39 chr17 81079803 81080063 -4358417 + AluSg SINE Alu 1 251 -59 626 268 73 55 chr17 81080991 81081263 -4357217 - MER115 DNA AcHobo -260 433 157 368 254 9 98 chr17 81081263 81081487 -4356993 - MER3 DNA MER1_type -5 204 1 229 267 13 13 chr17 81081487 81081554 -4356926 - MER115 DNA AcHobo -528 165 99 194 301 165 19 chr17 81081650 81081753 -4356727 + L2 LINE L2 3179 3296 -17 214 246 14 14 chr17 81081908 81081977 -4356503 - L2 LINE L2 -210 3062 2994 306 255 128 0 chr17 81082049 81082151 -4356329 - MIR SINE MIR -69 193 79 505 326 89 2 chr17 81083486 81083704 -4354776 + MIR SINE MIR 17 250 -12 1318 148 144 4 chr17 81083705 81083978 -4354502 - AluJb SINE Alu 0 316 10 21 36 0 0 chr17 81083991 81084019 -4354461 + AT_rich Low_complexity Low_complexity 1 28 0 2081 104 14 0 chr17 81084022 81084309 -4354171 + AluSx SINE Alu 1 291 -21 252 257 97 53 chr17 81085693 81085806 -4352674 - MIR SINE MIR -111 151 34 308 125 0 18 chr17 81086432 81086488 -4351992 + (TCCA)n Simple_repeat Simple_repeat 4 58 0 809 88 71 0 chr17 81086617 81086730 -4351750 + AluSg/x SINE Alu 88 208 -104 1773 174 3 0 chr17 81086766 81087064 -4351416 + AluJo SINE Alu 6 304 -8 491 302 88 79 chr17 81087138 81087348 -4351132 - L1ME4a LINE L1 -5 6116 5909 2016 155 0 0 chr17 81087348 81087652 -4350828 + AluSx SINE Alu 1 304 -8 491 302 88 79 chr17 81087652 81087695 -4350785 - L1ME4a LINE L1 -212 5909 5868 1903 143 3 3 chr17 81087695 81087995 -4350485 - AluSx SINE Alu -12 300 1 491 302 88 79 chr17 81087995 81088010 -4350470 - L1ME4a LINE L1 -253 5868 5855 562 183 29 0 chr17 81088010 81088114 -4350366 - L1MB5 LINE L1 -8 6166 6060 491 302 88 79 chr17 81088114 81088300 -4350180 - L1ME4a LINE L1 -266 5855 5656 724 331 177 16 chr17 81088312 81089003 -4349477 + L2 LINE L2 2176 2977 -337 1457 146 4 4 chr17 81089192 81089432 -4349048 - AluSg/x SINE Alu -8 304 65 2269 93 0 10 chr17 81089550 81089863 -4348617 + AluSx SINE Alu 1 310 -2 344 336 21 0 chr17 81089888 81090028 -4348452 - L1ME4a LINE L1 -482 5639 5497 2097 108 0 49 chr17 81090316 81090641 -4347839 + AluSg SINE Alu 1 309 -1 332 245 108 0 chr17 81090744 81090846 -4347634 - MLT1G LTR MaLR -201 389 277 693 138 9 17 chr17 81091096 81091212 -4347268 - AluJb SINE Alu 0 312 198 219 0 95 24 chr17 81091326 81091368 -4347112 + A-rich Low_complexity Low_complexity 1 45 0 2038 142 7 3 chr17 81091374 81091655 -4346825 + AluSq SINE Alu 1 285 -28 396 0 0 0 chr17 81091655 81091699 -4346781 + (CA)n Simple_repeat Simple_repeat 1 44 0 2038 142 7 3 chr17 81091699 81091726 -4346754 + AluSq SINE Alu 285 310 -3 799 223 163 0 chr17 81091726 81091928 -4346552 + MLT1E LTR MaLR 359 593 0 352 260 24 8 chr17 81091932 81092055 -4346425 - MLT1G LTR MaLR -317 273 149 281 387 65 0 chr17 81092051 81092219 -4346261 - MLT1G1 LTR MaLR -321 272 94 * 344 266 21 0 chr17 81092420 81092514 -4345966 - MLT1G1 LTR MaLR -498 97 2 232 265 59 0 chr17 81092535 81092603 -4345877 - MLT1G1-int LTR MaLR -25 1346 1275 2243 102 3 0 chr17 81092883 81093186 -4345294 + AluSx SINE Alu 1 304 -8 2323 91 3 0 chr17 81093229 81093538 -4344942 + AluSp SINE Alu 1 310 -3 1822 224 39 13 chr17 81093574 81094033 -4344447 - L1MC2 LINE L1 -2 6342 5872 319 105 12 0 chr17 81094033 81094118 -4344362 - Alu SINE Alu -256 46 2 372 352 26 18 chr17 81094390 81094617 -4343863 - MLT1G1-int LTR MaLR -830 541 313 2143 125 3 0 chr17 81094619 81094930 -4343550 - AluSx SINE Alu 0 312 1 2244 97 7 3 chr17 81094936 81095369 -4343111 - AluSx SINE Alu 0 434 1 615 153 0 81 chr17 81095379 81095417 -4343063 - FLAM_A SINE Alu -169 142 103 2475 51 0 16 chr17 81095417 81095731 -4342749 + AluY SINE Alu 2 310 -1 615 153 0 81 chr17 81095731 81095816 -4342664 - FLAM_A SINE Alu -208 103 29 217 372 34 34 chr17 81095936 81096084 -4342396 - MIR SINE MIR -36 226 79 252 0 0 0 chr17 81096084 81096112 -4342368 + (GGA)n Simple_repeat Simple_repeat 3 30 0 2221 102 0 31 chr17 81096346 81096669 -4341811 + AluSq SINE Alu 1 313 0 2181 107 0 3 chr17 81096671 81096971 -4341509 + AluSx SINE Alu 1 299 -13 2051 104 9 55 chr17 81096971 81097297 -4341183 + AluSq SINE Alu 3 313 0 257 128 43 0 chr17 81098860 81098907 -4339573 - MIR3 SINE MIR -44 164 116 291 245 13 60 chr17 81098962 81099113 -4339367 + (CCCCG)n Simple_repeat Simple_repeat 5 148 0 23 54 0 0 chr17 81099253 81099290 -4339190 + GC_rich Low_complexity Low_complexity 1 37 0 1459 193 60 44 chr17 81099525 81099800 -4338680 + L1MD1 LINE L1 5303 5587 -655 1903 153 7 3 chr17 81099800 81100095 -4338385 - AluJb SINE Alu -14 298 3 1459 193 60 44 chr17 81100095 81100203 -4338277 + L1MD1 LINE L1 5587 5692 -550 2188 118 0 3 chr17 81100239 81100544 -4337936 + AluSx SINE Alu 1 304 -8 828 203 12 0 chr17 81100550 81100713 -4337767 + L1MD1 LINE L1 6078 6242 0 2269 52 0 21 chr17 81100723 81101031 -4337449 + AluSq SINE Alu 1 302 0 33 0 0 0 chr17 81101097 81101130 -4337350 + AT_rich Low_complexity Low_complexity 1 33 0 2123 118 76 25 chr17 81101842 81102199 -4336281 - THE1C LTR MaLR 0 375 1 395 316 116 14 chr17 81103183 81103398 -4335082 + MIR SINE MIR 6 242 -20 2158 106 7 7 chr17 81103441 81103744 -4334736 + AluSx SINE Alu 1 303 -9 806 164 52 0 chr17 81103993 81104127 -4334353 + FLAM_C SINE Alu 1 141 -2 243 119 24 0 chr17 81105656 81105698 -4332782 - ORSL DNA AcHobo -42 233 191 2109 132 3 0 chr17 81105700 81106010 -4332470 - AluSx SINE Alu -1 311 1 28 0 0 0 chr17 81106015 81106043 -4332437 + AT_rich Low_complexity Low_complexity 1 28 0 2028 62 4 8 chr17 81106559 81106819 -4331661 - AluY SINE Alu -11 300 42 970 254 67 66 chr17 81106920 81107444 -4331036 - L1MDb LINE L1 -5413 996 474 2128 96 48 0 chr17 81107444 81107737 -4330743 - AluSq SINE Alu -6 307 1 1675 147 44 7 chr17 81107737 81108029 -4330451 - AluJo SINE Alu -9 303 1 970 254 67 66 chr17 81108029 81108338 -4330142 - L1MDb LINE L1 -6227 182 5 429 277 15 23 chr17 81110580 81110710 -4327770 + MIR SINE MIR 16 144 -118 1240 96 5 58 chr17 81111502 81111577 -4326903 - AluSx SINE Alu -134 178 101 2221 106 3 13 chr17 81111577 81111712 -4326768 + AluSq SINE Alu 1 136 -177 2150 110 7 0 chr17 81111712 81112011 -4326469 + AluSg SINE Alu 1 301 -9 2221 106 3 13 chr17 81112011 81112187 -4326293 + AluSq SINE Alu 136 309 -4 1240 96 5 58 chr17 81112187 81112299 -4326181 - AluSx SINE Alu -211 101 1 415 248 31 16 chr17 81112997 81113126 -4325354 + MER103 DNA DNA 35 165 -1 2410 82 0 0 chr17 81113671 81113977 -4324503 - AluSq SINE Alu -7 306 1 304 206 278 0 chr17 81114235 81114332 -4324148 + MER5B DNA MER1_type 20 143 -35 320 348 17 0 chr17 81114355 81114507 -4323973 + MIR SINE MIR 35 189 -72 885 176 85 11 chr17 81115030 81115206 -4323274 - MER53 DNA DNA 0 189 1 216 0 0 0 chr17 81115465 81115489 -4322991 + (TG)n Simple_repeat Simple_repeat 1 24 0 * 279 0 0 0 chr17 81115488 81115519 -4322961 + (GA)n Simple_repeat Simple_repeat 1 31 0 1870 157 0 23 chr17 81115567 81115873 -4322607 - AluJo SINE Alu -13 299 1 2001 103 39 0 chr17 81115877 81116158 -4322322 - AluSp SINE Alu -21 292 1 2373 79 0 22 chr17 81116597 81116915 -4321565 - AluSp SINE Alu 0 313 3 200 303 11 56 chr17 81116921 81117010 -4321470 + MIR SINE MIR 68 152 -110 289 319 35 0 chr17 81117030 81117143 -4321337 + L1ME3 LINE L1 6043 6159 -3 2355 77 0 3 chr17 81117261 81117561 -4320919 - AluSx SINE Alu -13 299 1 253 222 11 11 chr17 81118111 81118201 -4320279 + GA-rich Low_complexity Low_complexity 1 90 0 222 214 19 58 chr17 81118658 81118761 -4319719 + CT-rich Low_complexity Low_complexity 2 100 0 892 126 0 0 chr17 81118973 81119100 -4319380 - FLAM_C SINE Alu -16 127 1 1762 170 3 10 chr17 81119530 81119824 -4318656 - AluJo SINE Alu -20 292 1 2341 106 0 0 chr17 81120049 81120361 -4318119 + AluSx SINE Alu 1 312 0 339 303 83 42 chr17 81120369 81120435 -4318045 + L1MC4 LINE L1 7607 7669 -373 2086 135 0 13 chr17 81120435 81120746 -4317734 - AluSx SINE Alu -5 307 1 339 303 83 42 chr17 81120746 81121016 -4317464 + L1MC4 LINE L1 7669 7957 -85 1873 132 3 40 chr17 81123114 81123417 -4315063 + AluSx SINE Alu 6 297 -15 2838 16 0 0 chr17 81123697 81124015 -4314465 + AluYb8 SINE Alu 1 318 0 2137 125 0 0 chr17 81124255 81124551 -4313929 - AluSg SINE Alu -14 296 1 2452 57 0 0 chr17 81124558 81124857 -4313623 - AluY SINE Alu -12 299 1 366 329 14 21 chr17 81125289 81125432 -4313048 + MIR3 SINE MIR 19 160 -48 997 173 36 55 chr17 81125432 81125488 -4312992 + MER20 DNA MER1_type 1 56 -163 2176 110 0 16 chr17 81125488 81125796 -4312684 + AluSx SINE Alu 1 303 -9 997 173 36 55 chr17 81125796 81125959 -4312521 + MER20 DNA MER1_type 56 216 -3 2193 147 18 32 chr17 81126324 81126704 -4311776 - THE1C LTR MaLR 0 375 1 2289 100 10 0 chr17 81126715 81127034 -4311446 - AluSx SINE Alu 0 322 1 1821 146 40 13 chr17 81127110 81127411 -4311069 - AluJb SINE Alu -3 309 1 881 165 0 82 chr17 81127562 81127593 -4310887 - AluSg/x SINE Alu 0 310 278 2249 104 7 0 chr17 81127593 81127901 -4310579 - AluSq SINE Alu -3 310 1 881 165 0 82 chr17 81127901 81128063 -4310417 - AluSg/x SINE Alu -32 278 133 1968 121 35 0 chr17 81128607 81128896 -4309584 - AluSq SINE Alu -14 299 1 1905 112 56 0 chr17 81129188 81129474 -4309006 + AluSx SINE Alu 1 302 -10 257 198 0 165 chr17 81129662 81129783 -4308697 + L2 LINE L2 2745 2845 -469 252 333 17 56 chr17 81129905 81130085 -4308395 - MLT1I LTR MaLR 0 409 278 476 278 37 6 chr17 81130283 81130445 -4308035 + L2 LINE L2 2846 3012 -301 417 168 32 0 chr17 81130448 81130543 -4307937 + L1M LINE L1 5285 5382 -860 1007 142 0 7 chr17 81130767 81130922 -4307558 + AluSg/x SINE Alu 144 297 -15 350 145 0 0 chr17 81131378 81131440 -4307040 - MER53 DNA DNA 0 189 128 711 277 0 6 chr17 81131440 81131599 -4306881 - FRAM SINE Alu -21 155 1 392 214 10 0 chr17 81131599 81131697 -4306783 + MER53 DNA DNA 63 161 -28 218 259 73 15 chr17 81131853 81131945 -4306535 + MIR SINE MIR 58 155 -80 783 226 0 0 chr17 81132041 81132174 -4306306 + FRAM SINE Alu 1 133 -43 246 62 0 0 chr17 81132184 81132216 -4306264 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 809 295 181 14 chr17 81132949 81133379 -4305101 + L2 LINE L2 2811 3312 -1 2078 202 115 2 chr17 81133487 81133967 -4304513 + MLT2B3 LTR ERVL 1 534 -20 498 163 34 22 chr17 81133972 81134150 -4304330 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2055 134 0 3 chr17 81134150 81134449 -4304031 - AluSx SINE Alu -14 298 1 643 167 40 11 chr17 81134454 81134628 -4303852 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 195 100 0 0 chr17 81134653 81134683 -4303797 + (TCCA)n Simple_repeat Simple_repeat 3 32 0 1359 216 62 69 chr17 81134731 81135120 -4303360 - MLT1B LTR MaLR -4 386 1 567 285 94 19 chr17 81135387 81135746 -4302734 + LTR33A LTR ERVL 46 404 -119 2989 249 71 37 chr17 81135755 81136578 -4301902 + MER69B DNA AcHobo 46 839 -1687 2194 118 0 3 chr17 81136578 81136882 -4301598 - AluSx SINE Alu -9 303 1 2191 129 0 0 chr17 81136886 81137197 -4301283 - AluJb SINE Alu -1 311 1 2989 249 71 37 chr17 81137197 81137420 -4301060 + MER69B DNA AcHobo 841 1133 -93 302 240 62 0 chr17 81137461 81137557 -4300923 + LTR33A LTR ERVL 387 488 -35 861 130 0 55 chr17 81137557 81137703 -4300777 + AluJo SINE Alu 1 138 -174 1623 180 4 11 chr17 81137705 81137983 -4300497 + AluJo SINE Alu 6 281 -31 360 0 0 0 chr17 81137989 81138029 -4300451 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 2234 100 0 10 chr17 81138225 81138536 -4299944 + AluSx SINE Alu 1 308 -4 760 184 0 22 chr17 81139241 81139377 -4299103 + AluJo/FLAM SINE Alu 1 133 -169 1656 94 5 5 chr17 81139380 81139603 -4298877 - AluSp SINE Alu -24 289 67 1356 70 0 0 chr17 81139704 81139875 -4298605 + AluSp SINE Alu 131 301 -12 2241 99 0 0 chr17 81139886 81140170 -4298310 + AluSx SINE Alu 1 287 -25 231 61 0 0 chr17 81140170 81140203 -4298277 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 198 260 20 0 chr17 81141766 81141816 -4296664 + L2 LINE L2 3220 3270 -2 2335 97 0 3 chr17 81143584 81143892 -4294588 + AluSx SINE Alu 1 307 -5 225 289 92 110 chr17 81144273 81144355 -4294125 - MIR SINE MIR -37 225 143 2186 123 0 0 chr17 81144355 81144665 -4293815 + AluSg SINE Alu 1 310 0 225 289 92 110 chr17 81144665 81144810 -4293670 - MIR SINE MIR -119 143 2 689 209 16 0 chr17 81144974 81145103 -4293377 - FAM SINE Alu -22 163 33 310 68 0 0 chr17 81145103 81145147 -4293333 - AluJ/F(R)AM SINE Alu -90 212 169 458 98 0 0 chr17 81145147 81145208 -4293272 - FRAM/FAM SINE Alu -100 76 16 234 321 36 45 chr17 81145384 81145496 -4292984 + L2 LINE L2 3193 3303 -10 26 0 0 0 chr17 81146096 81146122 -4292358 + AT_rich Low_complexity Low_complexity 1 26 0 1468 173 0 11 chr17 81147988 81148254 -4290226 + AluSg SINE Alu 46 308 -2 1874 173 0 10 chr17 81148394 81148700 -4289780 + AluJo SINE Alu 1 303 -9 318 336 125 0 chr17 81148753 81148881 -4289599 + L1MEd LINE L1 922 1065 -5054 2042 118 17 0 chr17 81148883 81149172 -4289308 + AluSx SINE Alu 1 294 -18 1899 100 44 127 chr17 81149827 81149903 -4288577 - THE1C LTR MaLR 0 375 294 2274 97 7 3 chr17 81149903 81150213 -4288267 - AluSq SINE Alu -2 311 1 1899 100 44 127 chr17 81150213 81150545 -4287935 - THE1C LTR MaLR -81 294 1 185 388 78 0 chr17 81151232 81151348 -4287132 + MIR SINE MIR 63 187 -75 361 260 17 28 chr17 81151687 81151868 -4286612 + GA-rich Low_complexity Low_complexity 1 179 0 * 457 262 15 21 chr17 81151848 81152125 -4286355 + (ATGGTG)n Simple_repeat Simple_repeat 1 275 0 1343 150 21 9 chr17 81152283 81152516 -4285964 + AluJo SINE Alu 65 300 -12 2175 93 43 7 chr17 81152516 81152818 -4285662 + AluSq SINE Alu 1 313 0 2861 217 82 50 chr17 81152821 81153394 -4285086 + L1MDb LINE L1 316 869 -5537 2202 118 7 0 chr17 81153394 81153699 -4284781 - AluSx SINE Alu -5 307 1 2861 217 82 50 chr17 81153699 81154320 -4284160 + L1MDb LINE L1 869 1682 -4724 1470 131 0 82 chr17 81154321 81154603 -4283877 + AluSx SINE Alu 42 300 -12 682 220 14 54 chr17 81154603 81154786 -4283694 + L1MDb LINE L1 3079 3253 -3153 1596 184 23 13 chr17 81154786 81155095 -4283385 - AluJb SINE Alu 0 312 1 682 220 14 54 chr17 81155095 81155134 -4283346 + L1MDb LINE L1 3253 3292 -3114 790 251 0 0 chr17 81155143 81155306 -4283174 + FAM SINE Alu 1 48 -1 2303 88 3 0 chr17 81155326 81155622 -4282858 + AluSx SINE Alu 3 299 -13 1193 134 0 6 chr17 81155622 81155801 -4282679 + AluSp SINE Alu 134 311 -2 332 361 161 14 chr17 81156145 81157081 -4281399 - L2 LINE L2 -193 3079 1990 480 273 65 35 chr17 81157923 81158183 -4280297 - L2 LINE L2 -74 3198 2931 238 281 107 0 chr17 81158179 81158300 -4280180 + MIR SINE MIR 37 170 -92 * 435 287 7 0 chr17 81159420 81159715 -4278765 + (CA)n Simple_repeat Simple_repeat 1 297 0 348 307 0 0 chr17 81159749 81159928 -4278552 + (CA)n Simple_repeat Simple_repeat 2 180 0 216 278 0 0 chr17 81159932 81159986 -4278494 + (CATA)n Simple_repeat Simple_repeat 1 54 0 253 196 0 0 chr17 81159987 81160038 -4278442 - MER4-int LTR ERV1 -5436 1162 1112 367 290 0 0 chr17 81160057 81160150 -4278330 + (CA)n Simple_repeat Simple_repeat 2 94 0 253 128 43 0 chr17 81160823 81160870 -4277610 - MIR3 SINE MIR -44 164 116 218 266 59 24 chr17 81160927 81161096 -4277384 + (CCCGG)n Simple_repeat Simple_repeat 1 175 0 29 79 0 11 chr17 81161165 81161202 -4277278 + GC_rich Low_complexity Low_complexity 1 37 -51 192 77 0 0 chr17 81161202 81161228 -4277252 + (GTCTG)n Simple_repeat Simple_repeat 1 26 0 29 79 0 11 chr17 81161228 81161279 -4277201 + GC_rich Low_complexity Low_complexity 37 88 0 1038 231 126 56 chr17 81161527 81161994 -4276486 - MLT2B1 LTR ERVL -15 505 6 2308 98 0 3 chr17 81161999 81162296 -4276184 + AluSq SINE Alu 1 296 -17 2384 114 44 47 chr17 81162569 81162699 -4275781 + MSTA LTR MaLR 1 130 -298 2230 114 56 8 chr17 81162699 81163057 -4275423 + THE1C LTR MaLR 1 375 0 2384 114 44 47 chr17 81163057 81163125 -4275355 + MSTA LTR MaLR 130 197 -231 2313 88 0 14 chr17 81163125 81163420 -4275060 + AluSc SINE Alu 1 291 -18 2384 114 44 47 chr17 81163420 81163649 -4274831 + MSTA LTR MaLR 197 428 0 2121 135 0 7 chr17 81164588 81164892 -4273588 + AluSx SINE Alu 4 305 -7 1053 236 105 100 chr17 81164893 81165440 -4273040 - L1MC5 LINE L1 -540 7421 6826 1731 120 20 4 chr17 81165440 81165690 -4272790 - AluSx SINE Alu -17 295 42 1053 236 105 100 chr17 81165690 81165977 -4272503 - L1MC5 LINE L1 -1135 6826 6542 2342 96 20 0 chr17 81165979 81166282 -4272198 - AluSx SINE Alu -2 310 2 1562 180 33 26 chr17 81166509 81166815 -4271665 + AluJo SINE Alu 1 308 -4 1828 175 14 0 chr17 81166817 81167109 -4271371 + AluJb SINE Alu 1 296 -16 2458 97 3 0 chr17 81167312 81167623 -4270857 - AluSq SINE Alu -1 312 1 227 253 138 0 chr17 81167634 81167721 -4270759 - HAL1b LINE L1 -809 539 441 2542 73 0 0 chr17 81167910 81168210 -4270270 + AluY SINE Alu 1 300 -11 2141 132 3 0 chr17 81168410 81168721 -4269759 + AluSx SINE Alu 1 312 0 2187 120 3 19 chr17 81169789 81170097 -4268383 + AluSq SINE Alu 1 303 -10 320 209 0 73 chr17 81171891 81172082 -4266398 + (CCCTAA)n Simple_repeat Simple_repeat 3 179 0 * 412 84 31 105 chr17 81171987 81172178 -4266302 + (CCTA)n Simple_repeat Simple_repeat 4 180 0 182 85 27 106 chr17 81172208 81172396 -4266084 + (CCTA)n Simple_repeat Simple_repeat 4 176 0 415 110 21 94 chr17 81172413 81172604 -4265876 + (CCTA)n Simple_repeat Simple_repeat 4 180 0 215 122 0 24 chr17 81173240 81173281 -4265199 + (CA)n Simple_repeat Simple_repeat 1 40 0 2382 100 3 0 chr17 81178198 81178498 -4259982 + AluSq SINE Alu 1 301 -12 2250 134 0 0 chr17 81180589 81180895 -4257585 + AluSx SINE Alu 1 306 -6 1158 156 55 5 chr17 81180901 81181100 -4257380 + AluJo SINE Alu 85 293 -19 371 221 0 23 chr17 81182519 81182605 -4255875 - L2 LINE L2 -43 3270 3187 817 188 6 39 chr17 81183625 81183806 -4254674 + FAM SINE Alu 1 175 0 2326 111 0 6 chr17 81183821 81184136 -4254344 + AluSq SINE Alu 1 313 0 2106 132 6 3 chr17 81185392 81185703 -4252777 - AluSx SINE Alu 0 312 1 2495 74 3 0 chr17 81185706 81186004 -4252476 - AluSx SINE Alu -13 299 1 742 167 0 23 chr17 81186004 81186136 -4252344 - AluJo/FLAM SINE Alu -173 129 1 2329 101 0 0 chr17 81186591 81186887 -4251593 + AluSg SINE Alu 1 296 -14 1515 145 5 0 chr17 81187906 81188120 -4250360 + AluSx SINE Alu 36 250 -62 1857 165 10 7 chr17 81188162 81188453 -4250027 - AluJo SINE Alu -20 292 1 235 226 0 0 chr17 81188672 81188725 -4249755 + L1ME3A LINE L1 6117 6169 -1 2274 112 7 0 chr17 81189036 81189341 -4249139 + AluSp SINE Alu 1 307 -6 2534 48 7 0 chr17 81189468 81189763 -4248717 + AluY SINE Alu 1 297 -14 1776 129 50 17 chr17 81190434 81190736 -4247744 + AluSx SINE Alu 1 312 0 784 293 78 4 chr17 81191219 81191451 -4247029 + MIR SINE MIR 13 261 -1 1949 140 14 10 chr17 81192562 81192854 -4245626 + AluSx SINE Alu 11 303 -9 1156 120 0 0 chr17 81192854 81193031 -4245449 + AluSg/x SINE Alu 134 310 0 889 135 0 0 chr17 81193044 81193177 -4245303 + FLAM_C SINE Alu 1 133 0 2008 151 10 0 chr17 81193775 81194067 -4244413 - AluJo SINE Alu -17 295 1 1925 171 7 3 chr17 81195378 81195676 -4242804 + AluJb SINE Alu 1 299 -13 788 279 36 16 chr17 81195883 81196130 -4242350 - L2 LINE L2 -508 2806 2555 2307 98 0 3 chr17 81196245 81196540 -4241940 + AluSg SINE Alu 1 294 -16 1913 104 8 0 chr17 81196542 81196801 -4241679 + AluSx SINE Alu 44 304 -8 2287 207 33 91 chr17 81197691 81198412 -4240068 + L1MD1 LINE L1 4507 5176 -970 2427 64 0 0 chr17 81198412 81198713 -4239767 + AluY SINE Alu 1 301 0 2287 207 33 91 chr17 81198713 81198830 -4239650 + L1MD1 LINE L1 5176 5298 -848 1211 135 38 39 chr17 81198841 81199275 -4239205 + LTR54 LTR ERV1 18 510 0 269 109 109 0 chr17 81199285 81199340 -4239140 + L1MB2 LINE L1 6111 6171 0 3710 217 49 12 chr17 81199346 81200266 -4238214 + L1MD1 LINE L1 5285 6238 -4 1723 151 0 23 chr17 81200337 81200602 -4237878 + AluJb SINE Alu 43 301 -11 1937 166 0 0 chr17 81200662 81200952 -4237528 + AluSx SINE Alu 1 290 -22 1362 157 4 8 chr17 81201117 81201352 -4237128 - MER46A DNA MER2_type -2 234 1 1113 242 81 9 chr17 81203532 81203854 -4234626 + L1MC4 LINE L1 6688 7032 -1010 235 236 67 95 chr17 81203901 81204257 -4234223 + L1MC3 LINE L1 7130 7441 -421 1505 88 0 0 chr17 81204257 81204438 -4234042 + AluSx SINE Alu 1 181 -131 235 236 67 95 chr17 81204438 81204658 -4233822 + L1MC3 LINE L1 7441 7666 -196 977 151 6 6 chr17 81204687 81204846 -4233634 - AluJb SINE Alu -3 309 151 316 301 89 31 chr17 81204846 81205105 -4233375 + L1MC4 LINE L1 7769 8042 0 238 254 0 0 chr17 81205446 81205501 -4232979 - Charlie8 DNA MER1_type -2271 146 92 2108 120 7 17 chr17 81206627 81206928 -4231552 + AluSq SINE Alu 1 298 -15 628 182 0 0 chr17 81207802 81207923 -4230557 + FRAM SINE Alu 43 163 -13 1961 114 46 4 chr17 81207951 81208231 -4230249 + AluSx SINE Alu 1 292 -20 582 51 0 0 chr17 81208234 81208312 -4230168 + (CATAA)n Simple_repeat Simple_repeat 1 78 0 273 57 0 0 chr17 81208312 81208347 -4230133 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2580 62 0 10 chr17 81208366 81208674 -4229806 + AluY SINE Alu 1 305 -6 1497 148 45 58 chr17 81209505 81209816 -4228664 + MER1B DNA MER1_type 33 339 0 704 165 82 0 chr17 81211180 81211350 -4227130 - MER119 DNA MER1_type -33 550 367 1982 156 10 7 chr17 81211452 81211754 -4226726 - AluJo SINE Alu -9 303 1 2156 106 0 11 chr17 81211923 81212207 -4226273 - AluSx SINE Alu -31 281 1 1126 221 129 55 chr17 81212868 81213303 -4225177 + MLT1C LTR MaLR 1 467 0 553 235 100 0 chr17 81214755 81214925 -4223555 - MER3 DNA MER1_type -22 187 1 1178 153 0 0 chr17 81215652 81215828 -4222652 - AluJb SINE Alu -8 304 129 1286 179 122 15 chr17 81215844 81216106 -4222374 + AluSg1 SINE Alu 1 290 -19 1966 146 0 23 chr17 81216106 81216408 -4222072 - AluSx SINE Alu -16 296 2 204 306 16 0 chr17 81217112 81217174 -4221306 - L2 LINE L2 -213 3059 2997 2475 84 0 0 chr17 81217214 81217511 -4220969 - AluSg SINE Alu -13 297 1 365 214 71 0 chr17 81217949 81218047 -4220433 + MER103 DNA DNA 18 122 -44 313 215 9 84 chr17 81218602 81218630 -4219850 + L1ME4a LINE L1 6020 6049 -72 959 187 6 6 chr17 81218630 81218796 -4219684 - FRAM SINE Alu 0 166 1 313 215 9 84 chr17 81218796 81218874 -4219606 + L1ME4a LINE L1 6049 6118 -3 499 287 12 0 chr17 81219056 81219223 -4219257 - MLT1D LTR MaLR 0 505 337 2742 111 13 0 chr17 81219239 81219628 -4218852 + MER1A DNA MER1_type 42 435 -94 251 88 0 0 chr17 81219629 81219663 -4218817 + AluSx SINE Alu 1 34 -267 822 98 0 0 chr17 81219696 81219798 -4218682 + AluSg SINE Alu 1 102 -208 5749 231 18 29 chr17 81219901 81221328 -4217152 + LTR10B-int LTR ERV1 5239 6649 0 414 214 86 8 chr17 81221328 81221445 -4217035 + LTR10B LTR ERV1 1 126 -421 1152 214 34 68 chr17 81221450 81221772 -4216708 + LTR10B LTR ERV1 237 547 0 605 194 34 13 chr17 81221772 81221955 -4216525 + MER61D LTR ERV1 340 501 0 600 173 79 0 chr17 81221955 81222082 -4216398 + L1MC2 LINE L1 6197 6333 -11 1598 162 72 24 chr17 81222172 81222462 -4216018 + AluSx SINE Alu 9 312 0 181 159 159 103 chr17 81222547 81222654 -4215826 - L2 LINE L2 -43 3270 3158 2229 126 3 0 chr17 81222730 81223040 -4215440 - AluSx SINE Alu -1 311 1 452 273 160 63 chr17 81223150 81223357 -4215123 + MIR SINE MIR 2 236 -26 847 160 0 0 chr17 81223357 81223488 -4214992 + FLAM_C SINE Alu 1 131 -2 452 273 160 63 chr17 81223488 81223518 -4214962 + MIR SINE MIR 236 262 0 508 122 100 11 chr17 81223984 81224074 -4214406 + MER4A LTR ERV1 1 98 -566 1613 135 0 19 chr17 81224117 81224376 -4214104 + MER4A LTR ERV1 411 664 0 191 355 0 0 chr17 81224986 81225048 -4213432 + MIR SINE MIR 5 66 -196 246 131 229 49 chr17 81225215 81225276 -4213204 - MER57A LTR ERV1 -37 366 295 221 265 82 31 chr17 81225450 81225548 -4212932 + MIR SINE MIR 93 195 -67 741 172 38 6 chr17 81225701 81225858 -4212622 - MER65C LTR ERV1 0 461 300 968 248 112 7 chr17 81226126 81226412 -4212068 - MER65C LTR ERV1 -145 316 1 2235 86 10 0 chr17 81226755 81227047 -4211433 - AluSp SINE Alu -18 295 1 295 173 0 25 chr17 81227652 81227721 -4210759 + GA-rich Low_complexity Low_complexity 2 70 -10 222 37 0 0 chr17 81227721 81227748 -4210732 + (GGGGA)n Simple_repeat Simple_repeat 2 28 0 295 173 0 25 chr17 81227748 81227759 -4210721 + GA-rich Low_complexity Low_complexity 70 80 0 222 37 0 0 chr17 81227861 81227888 -4210592 + (A)n Simple_repeat Simple_repeat 1 27 0 1886 154 0 43 chr17 81228069 81228393 -4210087 - AluSx SINE Alu -2 310 1 2396 110 0 0 chr17 81229919 81230229 -4208251 + AluSg SINE Alu 1 310 0 2110 145 0 0 chr17 81230231 81230535 -4207945 + AluSx SINE Alu 1 304 -8 1767 128 32 0 chr17 81230545 81230796 -4207684 + AluSx SINE Alu 54 312 0 803 133 9 151 chr17 81230849 81231074 -4207406 + L1MB3 LINE L1 5716 5908 -275 1568 125 12 78 chr17 81231088 81231408 -4207072 + L1MB3 LINE L1 5839 6137 -46 1169 104 0 49 chr17 81231410 81231574 -4206906 + AluSg SINE Alu 1 156 -154 2345 102 0 0 chr17 81231772 81232067 -4206413 + AluSg SINE Alu 1 295 -15 489 244 8 46 chr17 81232137 81232268 -4206212 - MER5A DNA MER1_type 0 189 64 2386 104 0 0 chr17 81233007 81233305 -4205175 - AluSx SINE Alu -14 298 1 208 380 73 29 chr17 81233477 81233614 -4204866 - L2 LINE L2 -276 2996 2854 851 99 160 0 chr17 81233720 81233872 -4204608 + AluSg SINE Alu 136 308 0 207 188 0 0 chr17 81234256 81234304 -4204176 + (TG)n Simple_repeat Simple_repeat 2 49 0 317 360 69 11 chr17 81234319 81234508 -4203972 - L2 LINE L2 -943 2371 2172 1154 158 87 109 chr17 81234986 81235138 -4203342 + MER2 DNA MER2_type 2 156 -188 1519 159 78 19 chr17 81235138 81235409 -4203071 - AluJo SINE Alu -25 287 1 1154 158 87 109 chr17 81235409 81235603 -4202877 + MER2 DNA MER2_type 156 340 -4 361 145 16 0 chr17 81236232 81236294 -4202186 + AluS SINE Alu 2 64 -239 1558 158 99 37 chr17 81236508 81236701 -4201779 + LTR28 LTR ERV1 1 223 -797 2174 143 0 0 chr17 81236701 81237001 -4201479 - AluSq SINE Alu -13 300 1 1558 158 99 37 chr17 81237001 81237129 -4201351 + LTR28 LTR ERV1 223 342 -678 342 232 124 98 chr17 81237136 81237330 -4201150 + LTR4 LTR ERV1 2 200 -396 835 249 21 29 chr17 81237510 81237791 -4200689 + LTR4 LTR ERV1 318 596 0 1491 169 47 77 chr17 81237799 81238271 -4200209 + LTR10B LTR ERV1 2 547 0 2190 211 87 39 chr17 81238271 81238790 -4199690 + LTR10B-int LTR ERV1 5 497 -6707 2201 105 0 62 chr17 81238790 81239115 -4199365 + AluSg SINE Alu 1 305 -5 2190 211 87 39 chr17 81239115 81239625 -4198855 + LTR10B-int LTR ERV1 497 1150 -6054 * 6567 231 33 17 chr17 81239620 81241180 -4197300 + HERVI LTR ERV1 841 2424 -4225 5830 266 21 23 chr17 81241173 81242847 -4195633 + HERVI LTR ERV1 4224 5893 -1892 * 189 0 0 0 chr17 81243183 81243204 -4195276 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2786 20 0 3 chr17 81243217 81243523 -4194957 + AluY SINE Alu 1 305 -6 700 158 0 0 chr17 81243523 81243624 -4194856 + AluSg/x SINE Alu 194 294 -16 2278 110 0 28 chr17 81243624 81243943 -4194537 + AluSx SINE Alu 3 312 0 378 254 71 52 chr17 81244076 81244344 -4194136 + L1MC5 LINE L1 7403 7675 -286 641 161 32 116 chr17 81244379 81244497 -4193983 + U4 snRNA snRNA 3 107 -38 2450 93 0 0 chr17 81244497 81244798 -4193682 - AluSx SINE Alu -11 301 1 641 161 32 116 chr17 81244798 81244834 -4193646 + U4 snRNA snRNA 107 144 -1 1173 135 22 0 chr17 81244900 81245085 -4193395 + AluJo SINE Alu 121 309 -3 556 236 44 54 chr17 81245087 81245199 -4193281 + L1MC5 LINE L1 7713 7824 -137 872 152 0 0 chr17 81245199 81245331 -4193149 - FLAM_C SINE Alu -1 132 1 556 236 44 54 chr17 81245331 81245421 -4193059 + L1MC5 LINE L1 7824 7913 -48 346 146 0 0 chr17 81246992 81247047 -4191433 + MER66A LTR ERV1 287 341 -137 198 0 0 0 chr17 81247047 81247069 -4191411 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr17 81247171 81247195 -4191285 + AT_rich Low_complexity Low_complexity 1 24 0 1589 170 0 19 chr17 81247331 81247602 -4190878 - AluJo SINE Alu -8 304 39 367 182 0 0 chr17 81249154 81249231 -4189249 + L1ME2 LINE L1 6087 6163 -1 249 177 0 65 chr17 81249250 81249312 -4189168 - L1ME3 LINE L1 -105 6057 6000 267 255 75 28 chr17 81249453 81249559 -4188921 + MIR3 SINE MIR 91 201 -7 206 174 22 0 chr17 81250430 81250476 -4188004 + A-rich Low_complexity Low_complexity 3 49 0 437 205 62 81 chr17 81251618 81251767 -4186713 + L1ME2 LINE L1 6005 6155 -9 1843 99 22 89 chr17 81251767 81251915 -4186565 + AluSq SINE Alu 10 128 -185 489 34 0 0 chr17 81251915 81251974 -4186506 + (CA)n Simple_repeat Simple_repeat 2 60 0 1843 99 22 89 chr17 81251974 81252138 -4186342 + AluSq SINE Alu 128 301 -12 2257 113 3 0 chr17 81252140 81252441 -4186039 + AluSx SINE Alu 1 302 -10 504 261 149 19 chr17 81252513 81252781 -4185699 + L1ME3A LINE L1 5851 6153 -17 180 211 18 53 chr17 81253766 81253823 -4184657 + MIR3 SINE MIR 154 208 0 1850 144 60 0 chr17 81254473 81254757 -4183723 - AluJb SINE Alu -9 303 3 409 246 55 0 chr17 81254894 81255004 -4183476 + MIR3 SINE MIR 82 197 -11 21 0 0 0 chr17 81255536 81255557 -4182923 + GC_rich Low_complexity Low_complexity 1 21 0 195 171 24 37 chr17 81255695 81255777 -4182703 + G-rich Low_complexity Low_complexity 5 85 0 272 285 7 21 chr17 81256059 81256203 -4182277 + G-rich Low_complexity Low_complexity 1 142 0 778 262 69 10 chr17 81256964 81257254 -4181226 + MARNA DNA Mariner 36 342 -244 2595 40 0 3 chr17 81257254 81257553 -4180927 + AluY SINE Alu 1 298 -13 2056 112 10 26 chr17 81257588 81257891 -4180589 + AluSq SINE Alu 9 306 -7 729 191 67 10 chr17 81257894 81258088 -4180392 + L1MC5 LINE L1 7312 7516 -445 954 179 16 5 chr17 81258207 81258391 -4180089 - AluJo SINE Alu -7 305 120 1973 103 29 29 chr17 81258400 81258712 -4179768 - AluSg SINE Alu 0 312 1 3776 74 14 0 chr17 81258717 81259215 -4179265 + LTR8 LTR ERV1 187 691 0 244 246 96 72 chr17 81259275 81259442 -4179038 - MER110A LTR ERV1 -297 171 1 1688 158 40 19 chr17 81259465 81259790 -4178690 + MSTB LTR MaLR 5 344 -82 2499 97 3 0 chr17 81259843 81260154 -4178326 + AluSp SINE Alu 1 312 -1 532 91 0 0 chr17 81260175 81260252 -4178228 + MSTB LTR MaLR 351 427 -1 713 211 14 146 chr17 81260302 81260596 -4177884 - MLT1J LTR MaLR -250 261 7 227 86 103 0 chr17 81260657 81260715 -4177765 + GA-rich Low_complexity Low_complexity 2 65 0 662 165 25 6 chr17 81260754 81260877 -4177603 + GA-rich Low_complexity Low_complexity 1 129 -32 2323 91 7 16 chr17 81260877 81261184 -4177296 + AluY SINE Alu 1 304 -7 662 165 25 6 chr17 81261184 81261218 -4177262 + GA-rich Low_complexity Low_complexity 129 161 0 1621 173 23 46 chr17 81261230 81261578 -4176902 + AluJo SINE Alu 13 353 0 411 348 110 16 chr17 81261717 81262091 -4176389 - L2 LINE L2 -1116 2198 1790 1726 163 0 69 chr17 81262158 81262293 -4176187 + AluJb SINE Alu 1 144 -168 2109 115 6 46 chr17 81262293 81262616 -4175864 - AluSx SINE Alu -2 310 1 1726 163 0 69 chr17 81262616 81262800 -4175680 + AluJb SINE Alu 144 298 -14 2450 84 0 0 chr17 81263095 81263394 -4175086 - AluSx SINE Alu -12 300 2 2132 134 0 31 chr17 81263879 81264200 -4174280 + AluJo SINE Alu 1 311 -1 2251 88 17 10 chr17 81264529 81264826 -4173654 + AluSx SINE Alu 3 301 -11 199 258 65 16 chr17 81265408 81265470 -4173010 - L2 LINE L2 -8 3264 3200 2373 97 0 0 chr17 81265483 81265773 -4172707 + AluSq SINE Alu 1 290 -23 1677 157 54 0 chr17 81266167 81266428 -4172052 + AluJb SINE Alu 21 295 -17 1995 108 7 28 chr17 81266430 81266760 -4171720 + AluSx SINE Alu 1 324 0 2162 101 18 0 chr17 81268299 81268663 -4169817 + AluSx SINE Alu 1 369 0 963 257 153 25 chr17 81268948 81269380 -4169100 - MLT1D LTR MaLR -18 487 1 2390 112 0 0 chr17 81269403 81269707 -4168773 + AluSx SINE Alu 1 304 -8 2221 90 0 24 chr17 81269716 81270100 -4168380 + L1PA8A LINE L1 5805 6180 0 304 186 255 29 chr17 81270770 81270872 -4167608 - MIR SINE MIR -118 144 20 2240 110 3 0 chr17 81270891 81271183 -4167297 - AluSx SINE Alu -19 293 1 2193 83 32 0 chr17 81271758 81272036 -4166444 + AluSq SINE Alu 3 289 -24 333 47 0 0 chr17 81272039 81272082 -4166398 + (TAA)n Simple_repeat Simple_repeat 3 45 0 2022 158 0 0 chr17 81272673 81272971 -4165509 - AluJb SINE Alu -14 298 1 28 61 0 0 chr17 81273096 81273145 -4165335 + AT_rich Low_complexity Low_complexity 1 49 0 1897 109 4 4 chr17 81273259 81273506 -4164974 - AluSx SINE Alu -65 247 1 419 204 74 0 chr17 81273507 81273615 -4164865 - MLT1C LTR MaLR -346 121 6 1680 153 10 100 chr17 81274197 81274437 -4164043 - MLT1B LTR MaLR -4 386 126 2291 112 3 0 chr17 81274437 81274740 -4163740 - AluSx SINE Alu -8 304 1 2698 42 0 10 chr17 81274744 81275055 -4163425 - AluY SINE Alu -3 308 1 1680 153 10 100 chr17 81275055 81275200 -4163280 - MLT1B LTR MaLR -267 123 31 180 0 0 0 chr17 81275787 81275807 -4162673 + (T)n Simple_repeat Simple_repeat 1 20 0 2293 110 0 3 chr17 81276130 81276430 -4162050 - AluSg SINE Alu -11 299 1 906 113 32 9 chr17 81276903 81277126 -4161354 + CT-rich Low_complexity Low_complexity 1 228 0 207 204 68 0 chr17 81277332 81277376 -4161104 + polypyrimidine Low_complexity Low_complexity 5 51 0 2199 109 36 0 chr17 81277904 81278237 -4160243 + AluSq SINE Alu 1 344 0 2210 130 3 0 chr17 81278963 81279270 -4159210 + AluSx SINE Alu 1 308 -4 1232 225 53 0 chr17 81279400 81279662 -4158818 + MER58 DNA MER1_type 9 284 -57 273 75 0 25 chr17 81279650 81279690 -4158790 + MER58 DNA MER1_type 2382 2420 0 * 204 294 15 15 chr17 81280025 81280093 -4158387 - MIR SINE MIR -190 72 5 1943 139 35 3 chr17 81280139 81280427 -4158053 + AluJo SINE Alu 1 297 -15 2159 109 7 10 chr17 81280429 81280723 -4157757 + AluSg SINE Alu 2 294 -16 2473 87 0 6 chr17 81280725 81281036 -4157444 + AluSc SINE Alu 1 309 0 2290 105 3 0 chr17 81282046 81282342 -4156138 + AluSx SINE Alu 1 297 -15 230 280 13 0 chr17 81282411 81282486 -4155994 - L2 LINE L2 -10 3262 3187 747 250 57 19 chr17 81282625 81282889 -4155591 - LTR37B LTR ERV1 -1 467 194 2253 99 0 0 chr17 81282995 81283301 -4155179 + AluSx SINE Alu 1 306 0 557 195 18 73 chr17 81283497 81283600 -4154880 + MER5B DNA MER1_type 22 114 -64 2147 120 45 0 chr17 81283600 81283891 -4154589 - AluSx SINE Alu -8 304 1 557 195 18 73 chr17 81283891 81283951 -4154529 + MER5B DNA MER1_type 114 176 -2 726 82 10 0 chr17 81284670 81284768 -4153712 + FLAM_C SINE Alu 22 120 -23 195 69 0 0 chr17 81284768 81284797 -4153683 + (CA)n Simple_repeat Simple_repeat 2 30 0 2628 53 0 0 chr17 81284972 81285276 -4153204 - AluY SINE Alu -7 304 1 635 108 0 0 chr17 81285434 81285527 -4152953 + AluSg/x SINE Alu 213 305 -5 1107 96 0 0 chr17 81285527 81285663 -4152817 - AluSq/x SINE Alu -177 136 1 244 250 130 9 chr17 81285676 81285784 -4152696 + MLT1I LTR MaLR 91 211 -198 1372 212 92 73 chr17 81285899 81286372 -4152108 + MER66A LTR ERV1 97 478 0 320 236 8 50 chr17 81286430 81286561 -4151919 + MLT1F LTR MaLR 432 542 0 943 121 0 0 chr17 81286866 81286998 -4151482 + FLAM_C SINE Alu 1 132 -1 1555 195 7 20 chr17 81287022 81287320 -4151160 + AluJo SINE Alu 1 294 -18 1835 148 14 27 chr17 81287894 81288191 -4150289 - AluJo SINE Alu -19 293 1 551 186 109 41 chr17 81288267 81288487 -4149993 - L1MC5 LINE L1 -36 7925 7691 1495 118 5 18 chr17 81288556 81288776 -4149704 - AluJo SINE Alu -10 302 86 21 0 0 0 chr17 81288788 81288809 -4149671 + AT_rich Low_complexity Low_complexity 1 21 0 861 257 94 59 chr17 81288880 81289047 -4149433 - L1MC5 LINE L1 -254 7707 7547 1840 142 62 3 chr17 81289047 81289335 -4149145 + AluSx SINE Alu 1 305 -7 861 257 94 59 chr17 81289335 81289572 -4148908 - L1MC5 LINE L1 -414 7547 7289 299 267 19 48 chr17 81291507 81291612 -4146868 + MER5B DNA MER1_type 74 175 -3 2501 94 0 0 chr17 81291619 81291928 -4146552 + AluSg SINE Alu 1 309 -1 369 271 51 45 chr17 81291953 81292130 -4146350 - MER5B DNA MER1_type 0 178 1 280 97 306 0 chr17 81292229 81292291 -4146189 - FLAM_A SINE Alu 0 133 53 186 208 83 0 chr17 81292522 81292570 -4145910 + MIR SINE MIR 98 149 -113 2057 112 51 10 chr17 81292751 81293045 -4145435 + AluSq SINE Alu 1 306 -7 203 246 77 0 chr17 81293896 81293961 -4144519 + L2 LINE L2 3200 3269 -3 214 261 43 33 chr17 81294168 81294260 -4144220 + MIR SINE MIR 2 94 -168 374 245 0 7 chr17 81295943 81296090 -4142390 + (TG)n Simple_repeat Simple_repeat 1 146 0 488 329 0 0 chr17 81296104 81296274 -4142206 + (TG)n Simple_repeat Simple_repeat 1 170 0 1765 150 68 4 chr17 81297271 81297551 -4140929 + AluJb SINE Alu 1 298 -14 2660 52 0 0 chr17 81297557 81297865 -4140615 + AluY SINE Alu 1 308 -3 2302 112 0 16 chr17 81297869 81298182 -4140298 + AluSx SINE Alu 5 312 0 314 322 0 0 chr17 81298402 81298492 -4139988 - MIR SINE MIR 0 262 173 442 228 148 5 chr17 81298949 81299011 -4139469 + L1M4 LINE L1 5606 5658 -516 1939 139 0 72 chr17 81299011 81299343 -4139137 + AluSg SINE Alu 1 308 -2 2129 130 3 0 chr17 81299350 81299651 -4138829 + AluSx SINE Alu 1 302 -10 442 228 148 5 chr17 81299651 81299769 -4138711 + L1M4 LINE L1 5663 5821 -353 2048 118 3 36 chr17 81299771 81300075 -4138405 + AluSc SINE Alu 1 294 -15 903 169 0 38 chr17 81300086 81300246 -4138234 - FRAM SINE Alu -22 154 1 1613 197 0 7 chr17 81300359 81300648 -4137832 - AluJo SINE Alu -13 299 13 2475 87 0 0 chr17 81301065 81301364 -4137116 + AluSx SINE Alu 1 299 -13 320 279 52 84 chr17 81301370 81301524 -4136956 + L2 LINE L2 3123 3271 -1 658 190 11 92 chr17 81301584 81301702 -4136778 + MER5B DNA MER1_type 9 108 -70 2376 91 0 0 chr17 81301702 81301998 -4136482 - AluSq SINE Alu -17 296 1 658 190 11 92 chr17 81301998 81302063 -4136417 + MER5B DNA MER1_type 108 177 -1 1925 146 13 16 chr17 81302548 81302856 -4135624 + AluSx SINE Alu 1 307 -5 2428 90 0 3 chr17 81302922 81303232 -4135248 + AluSc SINE Alu 1 309 0 245 325 53 29 chr17 81303357 81303603 -4134877 + MLT1L LTR MaLR 350 601 -14 1877 163 3 16 chr17 81303674 81303980 -4134500 + AluJb SINE Alu 11 312 0 501 226 174 32 chr17 81304426 81304614 -4133866 + MIR SINE MIR 1 227 -35 2429 76 0 0 chr17 81304614 81304902 -4133578 + AluSg SINE Alu 1 288 -22 501 226 174 32 chr17 81304902 81304945 -4133535 + MIR SINE MIR 227 262 0 351 318 112 46 chr17 81305043 81305436 -4133044 - LTR67 LTR ERVL -6 551 133 2335 94 7 0 chr17 81305494 81305791 -4132689 + AluSx SINE Alu 1 299 -13 771 162 0 22 chr17 81306046 81306182 -4132298 - FLAM_C SINE Alu 0 133 1 2249 127 7 0 chr17 81306945 81307244 -4131236 - AluSx SINE Alu -11 301 1 298 325 26 0 chr17 81307839 81307956 -4130524 - MER94 DNA DNA 0 134 15 2400 103 3 0 chr17 81308895 81309206 -4129274 - AluSx SINE Alu 0 312 1 1983 146 7 13 chr17 81310052 81310354 -4128126 + AluJo SINE Alu 1 300 -12 2446 92 7 0 chr17 81310819 81311122 -4127358 - AluSq SINE Alu -8 305 1 2536 85 0 0 chr17 81311412 81311717 -4126763 - AluSq SINE Alu -8 305 1 2343 93 0 3 chr17 81311727 81312027 -4126453 - AluSg SINE Alu -11 299 1 2233 128 0 7 chr17 81312503 81312808 -4125672 - AluSx SINE Alu -9 303 1 1806 190 23 0 chr17 81313081 81313381 -4125099 - AluJo SINE Alu 0 312 6 2320 51 62 0 chr17 81313390 81313666 -4124814 - AluY SINE Alu -18 293 1 2259 119 11 21 chr17 81313949 81314328 -4124152 - THE1C LTR MaLR 0 375 1 3246 99 4 23 chr17 81314328 81314812 -4123668 - THE1C-int LTR MaLR 0 1580 1106 436 82 0 0 chr17 81314812 81314873 -4123607 + Alu SINE Alu 234 294 -16 2144 92 3 82 chr17 81314878 81315060 -4123420 + MER4E LTR ERV1 407 602 -164 2214 111 27 0 chr17 81315060 81315358 -4123122 - AluSx SINE Alu -6 306 1 2436 79 20 13 chr17 81315366 81315671 -4122809 - AluY SINE Alu -4 307 1 2144 92 3 82 chr17 81315671 81315870 -4122610 + MER4E LTR ERV1 609 766 0 1527 148 60 95 chr17 81316620 81316870 -4121610 + LTR54 LTR ERV1 1 233 -277 731 180 0 0 chr17 81316870 81316998 -4121482 + FLAM_C SINE Alu 5 132 -1 1527 148 60 95 chr17 81316998 81317147 -4121333 + LTR54 LTR ERV1 233 386 -124 2248 111 3 0 chr17 81317148 81317446 -4121034 + AluSx SINE Alu 1 299 -13 2412 76 6 19 chr17 81317644 81317958 -4120522 + AluSg SINE Alu 1 310 0 201 286 111 0 chr17 81318028 81318154 -4120326 - L2 LINE L2 -212 3060 2921 703 257 171 27 chr17 81318264 81318393 -4120087 - MER92B LTR ERV1 0 636 527 2275 119 0 3 chr17 81318393 81318703 -4119777 + AluSg SINE Alu 1 309 -1 703 257 171 27 chr17 81318703 81319013 -4119467 - MER92B LTR ERV1 -109 527 134 2036 129 33 3 chr17 81319128 81319431 -4119049 + AluSx SINE Alu 1 312 0 2271 126 0 0 chr17 81319455 81319757 -4118723 + AluSx SINE Alu 1 302 -10 1679 167 7 21 chr17 81319776 81320064 -4118416 + AluJo SINE Alu 15 298 -14 2340 120 0 0 chr17 81320064 81320372 -4118108 + AluSx SINE Alu 1 308 -4 621 254 91 15 chr17 81320422 81320619 -4117861 + MER67C LTR ERV1 120 331 -379 932 161 52 10 chr17 81320634 81320827 -4117653 + MER67C LTR ERV1 510 710 0 435 250 162 0 chr17 81321128 81321276 -4117204 + MER5A DNA MER1_type 17 188 -1 2168 88 24 27 chr17 81321390 81321685 -4116795 + AluSx SINE Alu 1 294 -18 2521 84 0 0 chr17 81322131 81322439 -4116041 + AluSx SINE Alu 1 308 -4 189 107 0 0 chr17 81322452 81322480 -4116000 + (A)n Simple_repeat Simple_repeat 1 28 0 251 291 158 21 chr17 81322666 81322900 -4115580 + HAL1 LINE L1 2240 2505 -2 2132 102 11 3 chr17 81323096 81323381 -4115099 - AluSx SINE Alu -12 300 14 2141 120 14 0 chr17 81324359 81324651 -4113829 - AluSx SINE Alu -16 296 1 348 271 130 34 chr17 81324928 81325105 -4113375 + L2 LINE L2 3053 3246 -67 2541 63 0 10 chr17 81325283 81325584 -4112896 - AluSc SINE Alu -11 298 1 2226 97 17 0 chr17 81326302 81326590 -4111890 - AluSx SINE Alu -19 293 1 866 133 0 22 chr17 81326672 81326807 -4111673 + FLAM_C SINE Alu 2 133 0 1974 138 32 0 chr17 81327039 81327322 -4111158 - AluSg SINE Alu -18 292 1 2354 88 10 7 chr17 81328102 81328408 -4110072 + AluSx SINE Alu 1 307 -5 2097 82 96 3 chr17 81328551 81328833 -4109647 + AluSq SINE Alu 2 309 -4 339 247 38 108 chr17 81328912 81328970 -4109510 - MIR SINE MIR -40 222 162 553 215 39 15 chr17 81328970 81329100 -4109380 + FLAM_C SINE Alu 1 133 0 339 247 38 108 chr17 81329100 81329227 -4109253 - MIR SINE MIR -100 162 50 2585 58 3 10 chr17 81329890 81330201 -4108279 - AluSp SINE Alu -4 309 1 2295 99 14 0 chr17 81330759 81331053 -4107427 + AluSx SINE Alu 1 298 -14 546 193 193 55 chr17 81331219 81331400 -4107080 - MER3 DNA MER1_type -1 208 3 2218 100 4 0 chr17 81331480 81331784 -4106696 + AluSx SINE Alu 1 305 0 375 321 42 42 chr17 81331790 81331882 -4106598 + L2 LINE L2 2736 2830 -484 1645 155 75 4 chr17 81331882 81332160 -4106320 - AluJo SINE Alu -14 298 1 375 321 42 42 chr17 81332160 81332235 -4106245 + L2 LINE L2 2829 2903 -411 784 117 0 103 chr17 81332347 81332492 -4105988 - FLAM_C SINE Alu 0 133 4 1772 112 143 0 chr17 81332562 81332821 -4105659 - AluSx SINE Alu -16 296 1 2305 76 13 23 chr17 81332832 81333134 -4105346 - AluSq SINE Alu -14 299 1 425 296 56 0 chr17 81333168 81333293 -4105187 + L2 LINE L2 3139 3270 -2 430 291 39 34 chr17 81334438 81334617 -4103863 - MIR SINE MIR -63 199 20 1809 73 0 1 chr17 81334838 81335168 -4103312 + MER41A LTR ERV1 3 378 -176 1588 123 5 0 chr17 81335183 81335394 -4103086 + AluSx SINE Alu 35 246 -66 2245 94 0 3 chr17 81335395 81335709 -4102771 + AluSp SINE Alu 1 313 0 307 119 0 0 chr17 81335709 81335751 -4102729 + AluSx SINE Alu 233 274 -27 2354 119 3 0 chr17 81336868 81337178 -4101302 + AluSq SINE Alu 1 311 -2 2263 117 0 0 chr17 81337200 81337500 -4100980 + AluSx SINE Alu 1 300 -12 2373 102 0 13 chr17 81337566 81337880 -4100600 - AluSx SINE Alu -2 310 1 1530 139 50 66 chr17 81338114 81338293 -4100187 - AluJo SINE Alu -16 296 116 1925 104 74 34 chr17 81338293 81338590 -4099890 - AluSq SINE Alu -4 309 1 182 31 0 62 chr17 81338594 81338626 -4099854 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 1530 139 50 66 chr17 81338626 81338742 -4099738 - AluJo SINE Alu -199 113 1 238 239 30 30 chr17 81339192 81339259 -4099221 - MIR SINE MIR -70 192 126 406 169 0 0 chr17 81339377 81339448 -4099032 - MSTB2 LTR MaLR 0 457 387 1096 85 0 0 chr17 81339448 81339578 -4098902 + AluSx SINE Alu 1 130 -182 722 54 0 0 chr17 81339678 81339770 -4098710 - L1PA2 LINE L1 -66 6089 5998 1116 141 12 18 chr17 81339776 81339984 -4098496 + AluSx SINE Alu 113 319 0 2104 118 100 32 chr17 81340072 81340472 -4098008 + MSTA LTR MaLR 2 428 0 2239 114 0 10 chr17 81340512 81340819 -4097661 - AluSc SINE Alu -2 307 4 1771 122 4 8 chr17 81341913 81342160 -4096320 - AluSx SINE Alu -66 246 1 829 122 0 43 chr17 81342572 81342711 -4095769 + FLAM_C SINE Alu 1 133 0 340 258 97 2 chr17 81343206 81343344 -4095136 + MIR SINE MIR 42 189 -62 1533 153 0 60 chr17 81343758 81343928 -4094552 - AluJb SINE Alu -9 303 155 180 0 0 0 chr17 81343928 81343948 -4094532 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1533 153 0 60 chr17 81343948 81344058 -4094422 - AluJb SINE Alu -157 155 40 2482 92 0 0 chr17 81344061 81344364 -4094116 - AluSg SINE Alu -7 303 1 826 141 15 7 chr17 81344369 81344504 -4093976 - AluJo SINE Alu -176 136 1 308 253 108 38 chr17 81344849 81345035 -4093445 + LTR48 LTR ERV1 589 787 0 496 124 90 0 chr17 81345379 81345468 -4093012 + MER4A LTR ERV1 2 98 -566 1264 143 16 84 chr17 81345468 81345783 -4092697 + MER4A LTR ERV1 261 612 -52 1360 103 0 0 chr17 81345804 81345978 -4092502 - AluSg/x SINE Alu -9 303 130 2610 62 3 0 chr17 81346085 81346392 -4092088 - AluY SINE Alu -3 308 1 2318 101 0 3 chr17 81347486 81347783 -4090697 + AluSx SINE Alu 1 296 -16 1854 180 3 0 chr17 81347804 81348104 -4090376 + AluJo SINE Alu 1 301 -11 963 206 149 7 chr17 81348274 81348550 -4089930 + LTR53 LTR ERVL 194 508 -11 256 323 190 15 chr17 81349691 81349886 -4088594 + MIR SINE MIR 33 261 -1 397 198 108 27 chr17 81350866 81350977 -4087503 + MIR SINE MIR 47 166 -96 732 124 16 8 chr17 81352318 81352439 -4086041 + FRAM SINE Alu 37 158 -18 265 274 0 0 chr17 81352578 81352651 -4085829 - LTR33A LTR ERVL -4 519 447 311 190 63 13 chr17 81353210 81353289 -4085191 - LTR33A LTR ERVL -156 367 285 457 184 58 0 chr17 81353554 81353657 -4084823 - MLT1D LTR MaLR -5 500 392 970 129 23 0 chr17 81353657 81353789 -4084691 + AluSq/x SINE Alu 1 135 -177 1508 152 0 21 chr17 81353789 81354026 -4084454 + AluJo SINE Alu 1 232 -80 1451 197 30 57 chr17 81354075 81354476 -4084004 - MLT1D LTR MaLR -109 396 7 1900 208 83 30 chr17 81354503 81354880 -4083600 - MLT1F LTR MaLR 0 542 130 1985 158 15 63 chr17 81354880 81355023 -4083457 - MLT1B LTR MaLR 0 390 242 2143 128 0 0 chr17 81355023 81355422 -4083058 - AluSx SINE Alu 0 399 1 1985 158 15 63 chr17 81355422 81355687 -4082793 - MLT1B LTR MaLR -148 242 1 1900 208 83 30 chr17 81355687 81355813 -4082667 - MLT1F LTR MaLR -412 130 12 2346 103 0 0 chr17 81355836 81356126 -4082354 - AluSx SINE Alu -19 293 4 680 289 132 47 chr17 81356227 81356356 -4082124 - L1MC4a LINE L1 -1902 5906 5789 2310 101 0 3 chr17 81356356 81356652 -4081828 - AluSq SINE Alu -17 296 2 680 289 132 47 chr17 81356652 81356948 -4081532 - L1MC4a LINE L1 -2019 5789 5439 2291 110 0 0 chr17 81356948 81357248 -4081232 + AluJb SINE Alu 1 300 -12 680 289 132 47 chr17 81357248 81357267 -4081213 - L1MC4a LINE L1 -2369 5439 5423 1832 196 48 35 chr17 81357275 81357419 -4081061 - L1MB5 LINE L1 -8 6166 6025 1881 152 3 3 chr17 81357419 81357709 -4080771 + AluJo SINE Alu 21 310 -2 1832 196 48 35 chr17 81357709 81357997 -4080483 - L1MB5 LINE L1 -149 6025 5728 351 154 0 0 chr17 81357993 81358058 -4080422 - L1MC4a LINE L1 -2368 5440 5376 * 453 273 62 25 chr17 81358271 81358432 -4080048 - MIR SINE MIR -3 259 93 2547 191 54 30 chr17 81358630 81359168 -4079312 - MLT1F1 LTR MaLR 0 567 17 1711 245 36 2 chr17 81359541 81360015 -4078465 + Charlie4a DNA MER1_type 17 506 -2 1961 130 26 32 chr17 81360805 81361182 -4077298 + THE1C LTR MaLR 1 375 0 387 304 122 0 chr17 81361193 81361341 -4077139 + MIR SINE MIR 97 262 0 267 178 133 44 chr17 81362215 81362305 -4076175 + MIR SINE MIR 12 109 -153 2308 167 47 2 chr17 81362307 81362715 -4075765 - MSTB LTR MaLR 0 426 1 9035 166 21 25 chr17 81362725 81362912 -4075568 - MSTA-int LTR MaLR -13 1638 1452 2317 102 0 22 chr17 81362912 81363225 -4075255 - AluSx SINE Alu -6 306 1 9035 166 21 25 chr17 81363225 81364062 -4074418 - MSTA-int LTR MaLR -199 1452 621 2251 114 0 3 chr17 81364062 81364361 -4074119 - AluSg SINE Alu -12 298 1 9035 166 21 25 chr17 81364361 81364979 -4073501 - MSTA-int LTR MaLR -1030 621 2 2520 131 11 34 chr17 81364983 81365419 -4073061 - MSTA LTR MaLR 0 428 3 428 317 7 14 chr17 81365431 81365576 -4072904 + MIR SINE MIR 118 261 -1 247 49 49 0 chr17 81365576 81365617 -4072863 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 291 239 28 55 chr17 81365825 81365934 -4072546 - MIR SINE MIR -112 150 45 1129 142 32 46 chr17 81366304 81366454 -4072026 + MLT1A1 LTR MaLR 7 155 -210 1985 153 14 0 chr17 81366454 81366748 -4071732 + AluJb SINE Alu 1 298 -14 1129 142 32 46 chr17 81366748 81366816 -4071664 + MLT1A1 LTR MaLR 155 222 -143 2449 86 0 16 chr17 81366871 81367174 -4071306 + AluSq SINE Alu 1 298 -15 592 291 98 21 chr17 81367174 81367511 -4070969 - L1M4 LINE L1 -1541 4605 4243 296 175 18 0 chr17 81367563 81367620 -4070860 + MLT1J LTR MaLR 3 60 -451 2268 216 54 90 chr17 81367691 81367749 -4070731 - MER21B LTR ERV1 -71 792 733 1936 152 49 3 chr17 81367749 81368098 -4070382 - MLT1A1 LTR MaLR 0 365 1 2268 216 54 90 chr17 81368098 81368513 -4069967 - MER21B LTR ERV1 -130 733 357 1504 170 23 56 chr17 81368513 81368819 -4069661 + AluJo SINE Alu 1 296 -16 2268 216 54 90 chr17 81368819 81369153 -4069327 - MER21B LTR ERV1 -506 357 13 604 297 85 24 chr17 81369167 81369325 -4069155 + MLT1J LTR MaLR 56 236 -275 3256 160 12 34 chr17 81369325 81369791 -4068689 + MER41B LTR ERV1 1 451 -184 2419 82 10 0 chr17 81369791 81370095 -4068385 + AluSx SINE Alu 1 307 -5 3256 160 12 34 chr17 81370095 81370277 -4068203 + MER41B LTR ERV1 451 635 0 604 297 85 24 chr17 81370277 81370364 -4068116 + MLT1J LTR MaLR 236 316 -195 2166 92 4 4 chr17 81370664 81370937 -4067543 + AluSx SINE Alu 23 295 -17 740 162 0 0 chr17 81370959 81371076 -4067404 + FLAM_C SINE Alu 2 118 -15 705 107 39 0 chr17 81371110 81371213 -4067267 + MER30 DNA MER1_type 124 230 0 927 248 21 17 chr17 81371258 81371496 -4066984 - LTR16A LTR ERVL -28 422 184 377 313 7 0 chr17 81371819 81371966 -4066514 + L1MEd LINE L1 28 175 -5944 2405 96 19 22 chr17 81372289 81372654 -4065826 - THE1B LTR MaLR 0 364 1 790 174 0 0 chr17 81372762 81372894 -4065586 - FLAM_A SINE Alu 0 133 2 805 145 22 7 chr17 81373095 81373233 -4065247 + MSTB LTR MaLR 1 140 -286 2165 114 0 17 chr17 81373335 81373632 -4064848 - AluSx SINE Alu -16 296 5 233 259 0 37 chr17 81373642 81373723 -4064757 - L1MD3 LINE L1 -14 7981 7904 1162 176 26 26 chr17 81373733 81374000 -4064480 - L1MD3 LINE L1 0 7995 7729 377 305 85 40 chr17 81375145 81375345 -4063135 + L2 LINE L2 3065 3273 -40 245 180 0 0 chr17 81375824 81375874 -4062606 + MIR SINE MIR 103 152 -110 372 150 0 0 chr17 81376222 81376282 -4062198 - AluJ/FLAM SINE Alu -242 60 1 2191 100 7 4 chr17 81376630 81376935 -4061545 + AluSx SINE Alu 1 306 0 379 271 26 66 chr17 81376991 81377142 -4061338 - MER102b DNA MER1_type -22 319 175 1268 89 0 0 chr17 81377170 81377328 -4061152 + AluSc SINE Alu 152 309 0 500 198 0 17 chr17 81377337 81377453 -4061027 - L1M4 LINE L1 -1012 5134 5021 864 169 47 0 chr17 81377554 81377702 -4060778 + MSTB LTR MaLR 272 426 0 1223 235 35 51 chr17 81377787 81378182 -4060298 + MLT1B LTR MaLR 1 389 -1 532 259 19 104 chr17 81378447 81378756 -4059724 - HAL1 LINE L1 0 2507 2225 3310 180 196 14 chr17 81379405 81380332 -4058148 - MER52C LTR ERV1 -1 1277 1 502 220 37 0 chr17 81380333 81380442 -4058038 + MER81 DNA DNA 1 113 -1 682 288 41 63 chr17 81380460 81380579 -4057901 - HAL1 LINE L1 -700 1807 1687 2551 74 0 0 chr17 81380579 81380890 -4057590 + AluY SINE Alu 1 311 0 530 110 0 0 chr17 81380900 81380982 -4057498 + L1MA9 LINE L1 6226 6307 -5 682 288 41 63 chr17 81380982 81381586 -4056894 - HAL1 LINE L1 -829 1678 813 361 326 177 0 chr17 81382245 81382426 -4056054 - MIR SINE MIR 0 262 50 3350 80 108 4 chr17 81382863 81383365 -4055115 + MER41A LTR ERV1 1 554 0 2567 118 15 7 chr17 81383380 81383787 -4054693 + MER41E LTR ERV1 15 424 -88 1697 102 0 5 chr17 81383888 81384103 -4054377 - AluSx SINE Alu -98 214 1 1314 111 5 10 chr17 81384103 81384302 -4054178 - MSTA LTR MaLR -230 198 1 741 214 33 0 chr17 81384478 81384660 -4053820 + MLT1D LTR MaLR 9 196 -309 499 277 103 37 chr17 81384729 81384971 -4053509 + MER21B LTR ERV1 388 645 -218 354 248 29 0 chr17 81385009 81385114 -4053366 - MER115 DNA AcHobo -581 112 5 2330 101 0 0 chr17 81386151 81386448 -4052032 - AluSq SINE Alu -16 297 1 553 144 7 86 chr17 81386822 81386961 -4051519 + FRAM SINE Alu 48 175 -1 2207 112 0 32 chr17 81388848 81389162 -4049318 - AluSx SINE Alu -8 304 1 883 140 30 0 chr17 81389175 81389339 -4049141 - L1MB2 LINE L1 0 6171 6003 2357 108 0 0 chr17 81389477 81389773 -4048707 - AluSx SINE Alu -16 296 1 226 292 8 83 chr17 81389834 81389898 -4048582 - L1MEd LINE L1 -2009 4373 4306 910 107 15 0 chr17 81389898 81390029 -4048451 - FLAM_C SINE Alu 0 133 1 226 292 8 83 chr17 81390029 81390041 -4048439 - L1MEd LINE L1 -2076 4306 4295 1871 119 101 4 chr17 81390041 81390309 -4048171 - AluSx SINE Alu -18 294 1 226 292 8 83 chr17 81390309 81390351 -4048129 - L1MEd LINE L1 -2087 4295 4263 297 167 15 0 chr17 81390357 81390423 -4048057 + Charlie1 DNA MER1_type 2201 2267 -494 440 290 100 79 chr17 81390475 81391429 -4047051 - L1MEd LINE L1 -2124 4258 3326 2211 119 0 0 chr17 81391429 81391742 -4046738 - AluSx SINE Alu 0 313 1 440 290 100 79 chr17 81391742 81391787 -4046693 - L1MEd LINE L1 -3056 3326 3283 546 122 0 0 chr17 81391787 81391869 -4046611 - FLAM_C SINE Alu -25 118 37 440 290 100 79 chr17 81391869 81392170 -4046310 - L1MEd LINE L1 -3099 3283 2990 1798 174 17 3 chr17 81392170 81392464 -4046016 + AluJo SINE Alu 5 302 -10 440 290 100 79 chr17 81392464 81392840 -4045640 - L1MEd LINE L1 -3392 2990 2457 2292 125 0 0 chr17 81392840 81393144 -4045336 + AluSg SINE Alu 1 304 -6 440 290 100 79 chr17 81393144 81393276 -4045204 - L1MEd LINE L1 -3925 2457 2329 1535 199 0 0 chr17 81393319 81393570 -4044910 - AluJb SINE Alu -8 304 54 340 179 67 10 chr17 81393717 81393802 -4044678 - MER58B DNA MER1_type -2080 340 261 832 173 0 0 chr17 81393802 81393935 -4044545 - FLAM_C SINE Alu 0 133 1 340 179 67 10 chr17 81393935 81393954 -4044526 - MER58B DNA MER1_type -2159 261 101 424 301 65 86 chr17 81394063 81394340 -4044140 - L1MEd LINE L1 -795 1948 1667 2415 106 0 0 chr17 81394340 81394652 -4043828 - AluSx SINE Alu 0 312 1 424 301 65 86 chr17 81394652 81395255 -4043225 - L1MEd LINE L1 -1076 1667 1010 1866 173 0 7 chr17 81395255 81395569 -4042911 - AluJo SINE Alu 0 312 1 424 301 65 86 chr17 81395569 81396051 -4042429 - L1MEd LINE L1 -1733 1010 519 2196 98 22 0 chr17 81396318 81396619 -4041861 - AluSx SINE Alu 0 307 1 1857 146 3 17 chr17 81396621 81396923 -4041557 - AluJo SINE Alu -14 298 1 2404 102 0 0 chr17 81397211 81397514 -4040966 - AluSx SINE Alu -9 303 1 2114 106 3 36 chr17 81398072 81398418 -4040062 + AluSx SINE Alu 1 336 0 2144 113 0 10 chr17 81399077 81399379 -4039101 - AluJb SINE Alu -13 299 1 2523 64 0 0 chr17 81399388 81399685 -4038795 - AluY SINE Alu -14 297 1 2402 90 3 0 chr17 81399686 81399986 -4038494 - AluSx SINE Alu -11 301 1 315 153 17 0 chr17 81400006 81400065 -4038415 - LTR24B LTR ERV1 -6 570 511 376 175 0 0 chr17 81400165 81400228 -4038252 + Alu SINE Alu 236 298 -4 570 168 11 0 chr17 81400255 81400350 -4038130 - Charlie5 DNA MER1_type -2507 105 10 243 0 0 0 chr17 81400350 81400377 -4038103 + (CA)n Simple_repeat Simple_repeat 2 28 0 518 213 181 16 chr17 81400377 81400565 -4037915 - MLT1G1 LTR MaLR -361 234 16 488 267 36 36 chr17 81400739 81400904 -4037576 + L2 LINE L2 3149 3313 0 1726 172 0 31 chr17 81401591 81401913 -4036567 - AluJb SINE Alu 0 313 1 183 80 0 0 chr17 81401913 81401938 -4036542 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 1092 176 164 0 chr17 81401945 81402044 -4036436 - L1PA16 LINE L1 0 6166 6085 698 10 0 39 chr17 81402044 81402147 -4036333 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 2194 106 3 0 chr17 81402147 81402424 -4036056 - AluSg SINE Alu -32 278 1 1092 176 164 0 chr17 81402424 81402584 -4035896 - L1PA16 LINE L1 -80 6086 5869 2463 58 0 38 chr17 81402591 81402904 -4035576 - AluY SINE Alu -10 301 1 2141 114 3 13 chr17 81402927 81403259 -4035221 - AluSx SINE Alu 0 329 1 281 325 0 0 chr17 81403303 81403386 -4035094 + MIR SINE MIR 78 160 -102 1117 273 61 72 chr17 81403414 81403625 -4034855 - MER77 LTR ERV1 -4 601 389 2126 128 0 0 chr17 81403625 81403940 -4034540 + AluSg SINE Alu 1 315 0 1117 273 61 72 chr17 81403940 81404365 -4034115 - MER77 LTR ERV1 -216 389 54 245 233 60 60 chr17 81404700 81404850 -4033630 - LTR58 LTR ERV1 -17 662 513 484 188 69 42 chr17 81404879 81405023 -4033457 - LTR43 LTR ERV1 -281 321 174 636 195 15 97 chr17 81405257 81405346 -4033134 - LTR39 LTR ERV1 -77 706 639 2155 85 4 4 chr17 81405346 81405639 -4032841 - AluSq SINE Alu 0 307 15 636 195 15 97 chr17 81405639 81405743 -4032737 - LTR39 LTR ERV1 -144 639 528 * 1725 157 48 51 chr17 81405738 81406133 -4032347 - LTR39 LTR ERV1 -388 395 2 2114 187 26 91 chr17 81406786 81406927 -4031553 - MER34B LTR ERV1 0 565 416 2407 77 0 0 chr17 81406927 81407214 -4031266 - AluSx SINE Alu 0 312 26 2114 187 26 91 chr17 81407214 81407676 -4030804 - MER34B LTR ERV1 -149 416 1 323 285 38 25 chr17 81407877 81408035 -4030445 + L1ME4a LINE L1 5961 6120 -1 2220 124 13 0 chr17 81408058 81408365 -4030115 - AluSx SINE Alu -1 311 1 1667 179 23 36 chr17 81409442 81409743 -4028737 - AluJo SINE Alu -15 297 1 952 103 14 41 chr17 81409866 81410012 -4028468 + AluSg/x SINE Alu 137 278 -34 321 305 62 9 chr17 81410510 81410698 -4027782 - MIR SINE MIR -13 195 48 380 281 97 0 chr17 81410856 81410970 -4027510 + MIR SINE MIR 48 172 -90 * 523 286 47 0 chr17 81410962 81411133 -4027347 - MER91A DNA MER1_type -17 179 1 2559 18 7 3 chr17 81411588 81411872 -4026608 + AluY SINE Alu 1 285 -26 1220 123 11 6 chr17 81611872 81612051 -3826429 + AluSg/x SINE Alu 114 293 -19 535 167 8 91 chr17 81612054 81612186 -3826294 - L1M3 LINE L1 -635 5536 5416 1281 141 8 21 chr17 81612269 81612511 -3825969 + L1MB3 LINE L1 5669 5907 -276 914 68 0 0 chr17 81612785 81612902 -3825578 - AluSg/x SINE Alu -1 309 193 2013 105 35 0 chr17 81613051 81613337 -3825143 - AluSq SINE Alu -17 296 1 553 236 5 111 chr17 81614137 81614283 -3824197 + L1MB7 LINE L1 5747 5864 -320 2220 100 3 0 chr17 81614283 81614582 -3823898 + AluSg SINE Alu 1 300 -10 553 236 5 111 chr17 81614582 81614651 -3823829 + L1MB7 LINE L1 5864 5939 -245 1974 159 0 10 chr17 81614654 81614968 -3823512 + AluJo SINE Alu 1 311 -1 203 380 78 0 chr17 81615088 81615217 -3823263 + MIR SINE MIR 49 187 -75 1891 94 12 0 chr17 81616544 81616800 -3821680 + AluSx SINE Alu 46 304 -8 641 278 107 27 chr17 81616801 81617284 -3821196 + L1ME3A LINE L1 5422 5949 -221 768 168 0 0 chr17 81617367 81617486 -3820994 + FLAM_C SINE Alu 1 119 -14 371 282 55 86 chr17 81617508 81617683 -3820797 + L1MCa LINE L1 1995 2174 -4268 291 71 0 0 chr17 81617690 81617732 -3820748 + (TG)n Simple_repeat Simple_repeat 1 42 0 2124 91 0 3 chr17 81617732 81618010 -3820470 - AluSx SINE Alu -29 283 5 371 282 55 86 chr17 81618010 81618134 -3820346 + L1MCa LINE L1 2174 6436 -6 273 298 53 9 chr17 81618896 81619010 -3819470 - MIR SINE MIR -50 212 94 1552 138 62 14 chr17 81619012 81619287 -3819193 + AluJo SINE Alu 7 294 -18 191 328 16 0 chr17 81620664 81620725 -3817755 - L2 LINE L2 -2 3311 3250 1658 113 0 13 chr17 81620958 81621196 -3817284 + AluSg/x SINE Alu 72 306 -6 400 165 12 24 chr17 81621240 81621325 -3817155 - AluJ/FRAM SINE Alu -7 305 222 252 0 0 0 chr17 81621452 81621480 -3817000 + (A)n Simple_repeat Simple_repeat 1 28 0 2051 102 0 40 chr17 81621918 81622086 -3816394 - AluSx SINE Alu -20 292 140 2243 83 0 3 chr17 81622086 81622387 -3816093 - AluY SINE Alu -11 300 1 2051 102 0 40 chr17 81622387 81622522 -3815958 - AluSx SINE Alu -172 140 1 272 255 20 51 chr17 81622534 81622632 -3815848 - MIR SINE MIR -122 140 46 2376 86 0 0 chr17 81622710 81623011 -3815469 - AluSq SINE Alu -10 303 3 1875 159 17 3 chr17 81623013 81623309 -3815171 - AluSq SINE Alu -12 301 2 2302 91 10 0 chr17 81623310 81623617 -3814863 - AluSg SINE Alu 0 310 1 2087 114 10 0 chr17 81623888 81624177 -3814303 - AluSx SINE Alu -15 297 6 790 141 94 8 chr17 81624924 81625052 -3813428 + AluSq SINE Alu 32 170 -143 1765 147 7 20 chr17 81625167 81625322 -3813158 - AluJb SINE Alu -16 296 145 2224 100 0 3 chr17 81625322 81625622 -3812858 - AluSq SINE Alu -14 299 1 1765 147 7 20 chr17 81625622 81625766 -3812714 - AluJb SINE Alu -167 145 1 2516 58 0 3 chr17 81626116 81626428 -3812052 - AluY SINE Alu 0 311 1 2386 84 7 0 chr17 81626428 81626735 -3811745 - AluSq SINE Alu -3 310 1 2164 91 3 23 chr17 81627517 81627826 -3810654 + AluSg1 SINE Alu 1 303 -6 337 203 250 27 chr17 81627996 81628144 -3810336 + L1MC4 LINE L1 7738 7918 -124 209 173 25 37 chr17 81628227 81628308 -3810172 + GA-rich Low_complexity Low_complexity 1 80 0 359 212 45 30 chr17 81628310 81628442 -3810038 + L1MC4 LINE L1 7893 8026 -16 1571 82 0 0 chr17 81628444 81628640 -3809840 + AluSx SINE Alu 1 196 -116 1530 129 4 9 chr17 81628741 81628966 -3809514 - AluSq SINE Alu -89 224 1 453 199 0 64 chr17 81628966 81629107 -3809373 - MER53 DNA DNA -56 133 2 1960 86 63 40 chr17 81629168 81629384 -3809096 - AluSc SINE Alu 0 309 83 2328 65 0 36 chr17 81629384 81629692 -3808788 - AluY SINE Alu -14 297 1 1960 86 63 40 chr17 81629692 81629777 -3808703 - AluSc SINE Alu -226 83 1 979 165 0 45 chr17 81629780 81629956 -3808524 - AluJb SINE Alu -10 302 135 258 324 14 28 chr17 81630464 81630609 -3807871 + MARNA DNA Mariner 209 351 -235 1671 107 160 0 chr17 81631000 81631319 -3807161 + LTR48B LTR ERV1 1 370 -274 264 133 0 0 chr17 81631422 81631467 -3807013 + L1PA13 LINE L1 6100 6144 -19 2209 88 14 10 chr17 81631486 81631783 -3806697 + AluSx SINE Alu 1 298 -14 247 308 90 0 chr17 81633964 81634042 -3804438 - L2 LINE L2 0 3313 3229 335 269 50 0 chr17 81634246 81634365 -3804115 - L2 LINE L2 -653 2661 2537 577 171 46 13 chr17 81634369 81634521 -3803959 - LTR48B LTR ERV1 -10 634 478 430 333 45 10 chr17 81635127 81635328 -3803152 + L1MC/D LINE L1 5558 5765 -2043 563 162 59 28 chr17 81635337 81635479 -3803001 + MLT1B LTR MaLR 263 390 0 323 335 52 11 chr17 81635525 81635716 -3802764 - L2 LINE L2 -646 2668 2470 1202 160 18 118 chr17 81635716 81635859 -3802621 + AluJo SINE Alu 5 161 -141 1671 157 0 0 chr17 81635859 81636114 -3802366 + AluJb SINE Alu 39 293 -19 1202 160 18 118 chr17 81636114 81636191 -3802289 + AluJo SINE Alu 161 184 -118 1532 124 0 39 chr17 81636191 81636425 -3802055 + AluSx SINE Alu 1 225 -87 1202 160 18 118 chr17 81636425 81636534 -3801946 + AluJo SINE Alu 184 302 0 812 224 0 0 chr17 81636539 81636717 -3801763 + FRAM SINE Alu 1 44 0 307 318 65 0 chr17 81636820 81636927 -3801553 - L1MC4a LINE L1 -1870 5938 5825 2195 101 10 0 chr17 81637241 81637547 -3800933 - AluSg SINE Alu -1 309 1 252 77 0 0 chr17 81638006 81638045 -3800435 + (GTTTG)n Simple_repeat Simple_repeat 1 39 0 1916 87 8 11 chr17 81638045 81638310 -3800170 - AluSx SINE Alu -27 285 22 829 235 116 71 chr17 81638326 81638704 -3799776 + MLT1C LTR MaLR 73 467 0 957 189 0 0 chr17 81638864 81639017 -3799463 - AluSg/x SINE Alu -5 307 155 378 325 119 56 chr17 81640681 81640967 -3797513 - L2 LINE L2 -2 3270 2967 2028 113 3 0 chr17 81641670 81641983 -3796497 + AluSp SINE Alu 1 314 0 729 183 0 78 chr17 81642227 81642380 -3796100 + FLAM_A SINE Alu 1 141 -1 316 255 137 26 chr17 81642425 81642578 -3795902 - Charlie7 DNA MER1_type -7 2605 2436 2442 62 0 7 chr17 81642800 81643104 -3795376 - AluY SINE Alu -9 302 1 2204 127 0 0 chr17 81644485 81644793 -3793687 - AluSx SINE Alu -4 308 1 3488 116 84 9 chr17 81645657 81646181 -3792299 + LTR6A LTR ERV1 1 563 -1 235 275 67 45 chr17 81646187 81646365 -3792115 - LTR33 LTR ERVL -307 214 33 2331 96 0 0 chr17 81646921 81647222 -3791258 + AluSx SINE Alu 1 301 -11 285 243 165 19 chr17 81647283 81647386 -3791094 - L2 LINE L2 0 3272 3155 184 234 0 21 chr17 81647375 81647422 -3791058 + MIR SINE MIR 180 225 -37 * 209 291 45 25 chr17 81648241 81648377 -3790103 - MIR SINE MIR -38 170 32 400 369 35 44 chr17 81650029 81650487 -3787993 - L2 LINE L2 -2 3270 2817 399 171 0 0 chr17 81650856 81650932 -3787548 + (CA)n Simple_repeat Simple_repeat 1 76 0 197 309 191 34 chr17 81651751 81652071 -3786409 + L2 LINE L2 2870 3239 -33 1712 183 10 7 chr17 81652350 81652645 -3785835 + AluJo SINE Alu 1 296 -16 397 281 200 0 chr17 81652671 81652806 -3785674 - MIR SINE MIR -24 238 77 622 317 66 8 chr17 81653043 81653286 -3785194 + MIR SINE MIR 2 258 -4 2087 83 0 35 chr17 81653300 81653589 -3784891 + AluSx SINE Alu 1 279 -33 405 0 0 0 chr17 81653589 81653634 -3784846 + (CA)n Simple_repeat Simple_repeat 1 45 0 1018 47 78 0 chr17 81654242 81654371 -3784109 - MER85 DNA T2_type 0 139 1 2343 87 0 3 chr17 81654451 81654761 -3783719 + AluSg SINE Alu 1 309 -1 332 363 111 0 chr17 81654855 81654990 -3783490 - MIR SINE MIR -85 177 28 1268 198 4 33 chr17 81656257 81656530 -3781950 - AluJb SINE Alu -7 305 41 1955 142 16 7 chr17 81656533 81656842 -3781638 - AluSx SINE Alu 0 312 1 217 211 0 39 chr17 81658060 81658112 -3780368 + L2 LINE L2 3264 3313 0 304 234 67 5 chr17 81658355 81658469 -3780011 + L1MD2 LINE L1 6257 8041 -1 347 222 86 0 chr17 81658490 81658571 -3779909 + L3 LINE CR1 1335 1422 -155 432 329 21 0 chr17 81658629 81658769 -3779711 + MIR SINE MIR 1 143 -119 1656 173 19 19 chr17 81658775 81659082 -3779398 + AluJo SINE Alu 1 307 -5 208 135 0 0 chr17 81660641 81660678 -3777802 + (A)n Simple_repeat Simple_repeat 1 37 0 514 293 42 68 chr17 81661462 81661725 -3776755 - MIR SINE MIR 0 262 7 2145 81 7 0 chr17 81662044 81662329 -3776151 - AluSp SINE Alu -21 292 6 47 0 0 0 chr17 81662519 81662566 -3775914 + AT_rich Low_complexity Low_complexity 1 47 0 1789 153 3 20 chr17 81662598 81662899 -3775581 - AluJb SINE Alu -16 296 1 327 84 10 0 chr17 81663162 81663223 -3775257 + Alu SINE Alu 1 43 -265 751 62 0 0 chr17 81663241 81663338 -3775142 + AluYa5 SINE Alu 153 249 -62 1248 131 14 45 chr17 81663338 81663560 -3774920 + AluJo SINE Alu 85 299 -13 950 158 7 0 chr17 81663944 81664096 -3774384 + FRAM SINE Alu 15 167 -9 2641 27 0 0 chr17 81664370 81664668 -3773812 - AluY SINE Alu -13 298 1 717 216 93 39 chr17 81664963 81665167 -3773313 + MER58C DNA MER1_type 1 215 0 2065 136 0 0 chr17 81665330 81665625 -3772855 + AluSx SINE Alu 1 295 -17 238 158 58 194 chr17 81665869 81665908 -3772572 + MER53 DNA DNA 1 44 -145 2172 110 0 13 chr17 81665908 81666216 -3772264 + AluSx SINE Alu 1 304 -8 238 158 58 194 chr17 81666216 81666231 -3772249 + MER53 DNA DNA 44 59 -130 2188 85 11 0 chr17 81666231 81666513 -3771967 + AluSg SINE Alu 7 291 -19 279 0 0 0 chr17 81666517 81666548 -3771932 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 238 158 58 194 chr17 81666548 81666626 -3771854 + MER53 DNA DNA 62 120 -69 1682 157 54 0 chr17 81666704 81666825 -3771655 + AluJo SINE Alu 1 114 -198 306 0 0 0 chr17 81666825 81666859 -3771621 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1682 157 54 0 chr17 81666859 81667017 -3771463 + AluJo SINE Alu 114 295 -17 2363 68 0 13 chr17 81667018 81667329 -3771151 + AluY SINE Alu 1 307 -4 2138 130 0 0 chr17 81667339 81667637 -3770843 + AluSx SINE Alu 1 298 -14 2222 104 7 0 chr17 81667637 81667934 -3770546 + AluSq SINE Alu 1 299 -14 2605 43 0 0 chr17 81668542 81668847 -3769633 - AluY SINE Alu -6 305 1 2120 75 0 11 chr17 81669365 81669646 -3768834 - AluSx SINE Alu 0 312 35 2171 111 0 0 chr17 81670275 81670572 -3767908 + AluSq SINE Alu 1 297 -16 207 0 0 0 chr17 81671069 81671092 -3767388 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1097 208 77 3 chr17 81671202 81671588 -3766892 - MLT1F LTR MaLR -94 448 1 230 325 59 14 chr17 81672101 81672265 -3766215 - MIR SINE MIR -21 241 75 2128 75 11 4 chr17 81673177 81673480 -3765000 + AluY SINE Alu 1 305 0 1623 219 22 59 chr17 81673596 81674028 -3764452 + L1MB3 LINE L1 5714 6160 -91 2181 110 0 0 chr17 81674028 81674319 -3764161 + AluSx SINE Alu 1 291 -21 1940 102 64 0 chr17 81674320 81674606 -3763874 + AluSq SINE Alu 1 303 0 1623 219 22 59 chr17 81674606 81674726 -3763754 + L1MB3 LINE L1 6159 6251 0 244 235 44 0 chr17 81675973 81676041 -3762439 - MIR3 SINE MIR -32 176 106 2338 88 3 0 chr17 81676815 81677120 -3761360 + AluSx SINE Alu 1 306 -6 2115 125 3 0 chr17 81677149 81677452 -3761028 + AluSq SINE Alu 1 304 -9 289 203 17 0 chr17 81677510 81677569 -3760911 - MER81 DNA DNA 0 114 55 287 288 13 39 chr17 81677622 81677841 -3760639 - MLT1L LTR MaLR -222 393 122 453 280 89 47 chr17 81677939 81678153 -3760327 + MIR SINE MIR 16 238 -24 1907 188 22 38 chr17 81678645 81678677 -3759803 - MLT1A1 LTR MaLR -3 362 331 1861 134 7 13 chr17 81678677 81678975 -3759505 - AluSc SINE Alu -11 298 3 1907 188 22 38 chr17 81678975 81679310 -3759170 - MLT1A1 LTR MaLR -34 331 1 226 288 50 12 chr17 81679357 81679437 -3759043 + L2 LINE L2 3189 3271 -1 1763 118 73 4 chr17 81679488 81679760 -3758720 + AluSx SINE Alu 1 291 -21 847 148 0 0 chr17 81680034 81680162 -3758318 + FLAM_C SINE Alu 1 128 -15 1469 181 16 50 chr17 81680173 81680476 -3758004 + AluJb SINE Alu 3 295 -17 2411 47 3 3 chr17 81680678 81680976 -3757504 - AluY SINE Alu -13 298 1 2071 103 0 45 chr17 81682135 81682281 -3756199 + AluSx SINE Alu 1 127 -185 2461 47 0 3 chr17 81682281 81682581 -3755899 + AluY SINE Alu 1 299 -12 2071 103 0 45 chr17 81682581 81682744 -3755736 + AluSx SINE Alu 127 296 -16 2101 127 20 0 chr17 81682973 81683272 -3755208 + AluJb SINE Alu 1 305 -7 2430 90 0 0 chr17 81684683 81684994 -3753486 + AluSq SINE Alu 1 311 -2 876 233 11 0 chr17 81685002 81685178 -3753302 - MER45A DNA AcHobo 0 178 1 536 303 34 0 chr17 81685316 81685491 -3752989 - MIR SINE MIR -55 207 27 413 288 204 21 chr17 81685559 81685750 -3752730 + MIR SINE MIR 22 247 -15 597 137 36 0 chr17 81685970 81686138 -3752342 + (CA)n Simple_repeat Simple_repeat 2 175 0 1516 87 5 0 chr17 81686314 81686509 -3751971 + AluSp SINE Alu 1 196 -117 267 250 40 0 chr17 81686752 81686852 -3751628 + LTR33 LTR ERVL 411 514 -7 312 393 81 0 chr17 81686930 81687103 -3751377 + MER91B DNA MER1_type 3 189 -1 360 362 66 14 chr17 81688350 81688560 -3749920 + MIR SINE MIR 36 257 -5 411 232 161 0 chr17 81689574 81689686 -3748794 - MIR SINE MIR -70 192 63 2350 98 0 0 chr17 81690564 81690870 -3747610 + AluSx SINE Alu 1 306 -6 1004 155 5 16 chr17 81690966 81691153 -3747327 + AluJb SINE Alu 119 303 -9 183 42 0 0 chr17 81691392 81691416 -3747064 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2110 124 0 16 chr17 81691734 81692041 -3746439 + AluSx SINE Alu 1 302 -10 1035 122 7 0 chr17 81692069 81692216 -3746264 + FRAM SINE Alu 11 158 -18 2183 103 7 0 chr17 81692222 81692514 -3745966 + AluSx SINE Alu 5 298 -14 376 251 57 12 chr17 81692520 81692539 -3745941 + L1ME LINE L1 774 791 -5289 1722 161 23 17 chr17 81692539 81692838 -3745642 + AluJb SINE Alu 1 301 -11 376 251 57 12 chr17 81692838 81693122 -3745358 + L1ME LINE L1 791 3216 -2864 2233 91 3 0 chr17 81693131 81693450 -3745030 + AluSp SINE Alu 1 320 0 415 272 123 9 chr17 81693455 81693478 -3745002 - L1ME4a LINE L1 -48 6073 6054 2161 122 3 3 chr17 81693478 81693790 -3744690 + AluSx SINE Alu 1 312 0 415 272 123 9 chr17 81693790 81693880 -3744600 - L1ME4a LINE L1 -67 6054 5947 402 21 0 0 chr17 81693886 81693933 -3744547 + (TG)n Simple_repeat Simple_repeat 2 48 0 2176 118 3 13 chr17 81694152 81694466 -3744014 + AluSp SINE Alu 1 311 -2 2164 96 0 3 chr17 81694696 81694987 -3743493 + AluSp SINE Alu 18 307 -6 1631 229 104 60 chr17 81695063 81695167 -3743313 - MLT1F LTR MaLR 0 542 444 1623 136 10 65 chr17 81695167 81695315 -3743165 + AluJb SINE Alu 1 125 -187 2151 121 0 6 chr17 81695315 81695629 -3742851 + AluSx SINE Alu 1 312 0 1623 136 10 65 chr17 81695629 81695788 -3742692 + AluJb SINE Alu 125 291 -21 1631 229 104 60 chr17 81695788 81696202 -3742278 - MLT1F LTR MaLR -98 444 1 290 307 56 13 chr17 81698700 81698855 -3739625 + MIR SINE MIR 20 182 -65 324 255 69 0 chr17 81698999 81699101 -3739379 + MIR3 SINE MIR 61 169 -39 396 171 0 0 chr17 81699956 81700038 -3738442 + (CA)n Simple_repeat Simple_repeat 1 82 0 1728 117 49 73 chr17 81702493 81702688 -3735792 + MSTA LTR MaLR 1 199 -229 2321 83 0 3 chr17 81702688 81702989 -3735491 + AluY SINE Alu 1 300 -11 1728 117 49 73 chr17 81702989 81703002 -3735478 + MSTA LTR MaLR 199 211 -217 2165 108 3 0 chr17 81703002 81703298 -3735182 + AluSp SINE Alu 1 297 -16 1728 117 49 73 chr17 81703298 81703473 -3735007 + MSTA LTR MaLR 211 376 -52 1106 105 0 0 chr17 81703473 81703616 -3734864 - AluSq/x SINE Alu -169 143 1 420 100 29 0 chr17 81703616 81703686 -3734794 + MSTA LTR MaLR 357 428 0 2307 57 40 3 chr17 81704864 81705163 -3733317 - AluY SINE Alu -1 310 1 225 271 0 0 chr17 81705561 81705683 -3732797 + (CA)n Simple_repeat Simple_repeat 1 122 0 223 245 0 0 chr17 81705732 81705781 -3732699 + (CA)n Simple_repeat Simple_repeat 1 49 0 242 202 37 37 chr17 81706565 81706674 -3731806 + G-rich Low_complexity Low_complexity 2 110 0 1417 161 112 28 chr17 81707320 81707606 -3730874 - AluJo SINE Alu -2 310 1 1927 151 0 16 chr17 81707756 81708061 -3730419 + AluSx SINE Alu 2 301 -11 963 215 18 36 chr17 81708706 81708929 -3729551 + MER20 DNA MER1_type 1 219 0 1671 179 26 16 chr17 81709861 81710168 -3728312 - AluJo SINE Alu -2 310 1 248 167 91 15 chr17 81710245 81710311 -3728169 + ORSL DNA AcHobo 166 236 -39 1611 141 0 40 chr17 81710451 81710727 -3727753 + AluSx SINE Alu 37 301 -11 2015 104 20 17 chr17 81710893 81711191 -3727289 - AluSp SINE Alu -14 299 1 1697 159 17 7 chr17 81711227 81711516 -3726964 + AluJb SINE Alu 1 292 -20 2077 108 35 0 chr17 81711729 81712017 -3726463 - AluSx SINE Alu -14 298 1 1938 131 17 0 chr17 81712017 81712315 -3726165 - AluSx SINE Alu -9 303 1 359 318 125 57 chr17 81712407 81712835 -3725645 - L1MEd LINE L1 -4875 1244 685 392 298 17 57 chr17 81713008 81713197 -3725283 - MLT1J2 LTR MaLR -184 262 78 2113 114 7 3 chr17 81713197 81713495 -3724985 - AluSx SINE Alu -13 299 1 392 298 17 57 chr17 81713495 81713568 -3724912 - MLT1J2 LTR MaLR -368 78 4 1652 59 0 20 chr17 81714421 81714644 -3723836 + AluSp SINE Alu 84 302 0 2353 107 0 0 chr17 81715112 81715409 -3723071 + AluSx SINE Alu 1 297 -15 2607 50 0 3 chr17 81715409 81715707 -3722773 + AluY SINE Alu 1 297 -14 1572 137 110 10 chr17 81715747 81716047 -3722433 - MER46B DNA MER2_type 0 236 32 409 167 0 0 chr17 81716095 81716161 -3722319 + AluS SINE Alu 6 71 -242 483 214 107 44 chr17 81716369 81716528 -3721952 + MER20 DNA MER1_type 26 194 -25 242 206 52 52 chr17 81717254 81717351 -3721129 - MIR SINE MIR -122 140 44 2128 125 14 0 chr17 81719286 81719581 -3718899 - AluSx SINE Alu -13 299 1 2153 88 49 0 chr17 81722582 81722866 -3715614 - AluSq SINE Alu -15 298 1 22 70 0 0 chr17 81724431 81724474 -3714006 + GC_rich Low_complexity Low_complexity 1 43 0 201 74 0 0 chr17 81724667 81724694 -3713786 + (CCG)n Simple_repeat Simple_repeat 3 29 0 2722 55 0 0 chr17 81725241 81725551 -3712929 + AluSp SINE Alu 1 310 -3 2133 104 0 36 chr17 81725563 81725910 -3712570 + AluSx SINE Alu 1 312 0 817 206 0 0 chr17 81725911 81726052 -3712428 + AluY SINE Alu 133 273 -38 2357 66 45 0 chr17 81726060 81726346 -3712134 + AluSc SINE Alu 1 299 -10 509 265 32 96 chr17 81726987 81727300 -3711180 - L1MA9 LINE L1 -39 6273 5981 2388 83 3 0 chr17 81727471 81727761 -3710719 - AluSp SINE Alu -22 291 1 266 241 0 0 chr17 81727849 81727903 -3710577 - MIR SINE MIR -62 146 93 2176 134 3 0 chr17 81729390 81729697 -3708783 - AluJb SINE Alu -4 308 1 341 137 32 42 chr17 81729725 81729820 -3708660 - MER53 DNA DNA -1 188 95 1041 161 25 0 chr17 81730021 81730182 -3708298 - AluJ SINE Alu -19 293 129 676 183 0 0 chr17 81730315 81730430 -3708050 - AluJ SINE Alu -187 125 11 347 310 70 14 chr17 81730440 81730582 -3707898 - MIR SINE MIR -107 155 6 282 345 30 74 chr17 81730728 81730809 -3707671 + MIR SINE MIR 20 103 -159 2153 137 7 0 chr17 81730809 81731109 -3707371 - AluSx SINE Alu -10 302 1 282 345 30 74 chr17 81731109 81731230 -3707250 + MIR SINE MIR 103 213 -49 1949 118 29 7 chr17 81731235 81731515 -3706965 - AluSx SINE Alu 0 312 27 2046 143 3 0 chr17 81732476 81732784 -3705696 + AluY SINE Alu 1 309 -2 2514 54 0 3 chr17 81733260 81733554 -3704926 - AluY SINE Alu -18 293 1 207 100 0 0 chr17 81733943 81733973 -3704507 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 1373 144 0 0 chr17 81734118 81734313 -3704167 + AluSg/x SINE Alu 105 299 -13 1660 107 0 0 chr17 81734316 81734531 -3703949 + AluSq SINE Alu 1 215 -98 2651 204 20 6 chr17 81734562 81735111 -3703369 - L1MB5 LINE L1 -47 6127 5571 325 95 79 0 chr17 81735152 81735215 -3703265 - L1PA15 LINE L1 -1 6164 6097 2322 81 28 0 chr17 81735215 81735500 -3702980 + AluSg SINE Alu 1 293 -17 25 51 0 0 chr17 81735695 81735734 -3702746 + AT_rich Low_complexity Low_complexity 1 39 0 332 239 23 39 chr17 81736290 81736420 -3702060 + L2 LINE L2 2578 2705 -609 975 180 105 15 chr17 81736703 81736903 -3701577 - MER58A DNA MER1_type -3 221 4 416 221 96 0 chr17 81736911 81737015 -3701465 - L2 LINE L2 -11 3302 3189 351 341 30 15 chr17 81737035 81737167 -3701313 + L2 LINE L2 3180 3313 0 3561 124 51 12 chr17 81737440 81738091 -3700389 + L1MA2 LINE L1 5629 6304 0 180 0 0 0 chr17 81738289 81738309 -3700171 + (CAGCC)n Simple_repeat Simple_repeat 3 22 0 564 237 0 0 chr17 81738667 81738840 -3699640 + (CCA)n Simple_repeat Simple_repeat 1 173 0 243 386 68 8 chr17 81739106 81739238 -3699242 - MIR3 SINE MIR -67 141 2 22 35 0 0 chr17 81740585 81740614 -3697866 + GC_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr17 81741172 81741196 -3697284 + AT_rich Low_complexity Low_complexity 1 24 0 290 202 75 43 chr17 81742626 81742720 -3695760 + MIR SINE MIR 164 260 -2 407 294 41 41 chr17 81742742 81742826 -3695654 - L1MB5 LINE L1 -2332 5476 5393 2602 42 0 19 chr17 81742826 81743133 -3695347 - AluY SINE Alu -10 301 1 407 294 41 41 chr17 81743133 81743269 -3695211 - L1MB5 LINE L1 -2414 5394 5256 301 314 186 17 chr17 81743296 81743468 -3695012 - L1MB5 LINE L1 -942 5204 5004 274 274 78 59 chr17 81743915 81744068 -3694412 + L2 LINE L2 2927 3082 -190 192 308 77 15 chr17 81744160 81744225 -3694255 + L2 LINE L2 3245 3313 0 2343 114 7 0 chr17 81744576 81744883 -3693597 - AluSx SINE Alu -3 309 1 523 177 10 0 chr17 81745881 81745977 -3692503 - FLAM_A SINE Alu -20 122 26 258 241 119 8 chr17 81746146 81746270 -3692210 - MIR SINE MIR -57 151 2 246 148 37 37 chr17 81746404 81746458 -3692022 - MIR3 SINE MIR -29 179 126 1662 177 4 0 chr17 81746573 81746838 -3691642 - AluJb SINE Alu -46 266 1 2107 121 3 13 chr17 81747173 81747471 -3691009 + AluSq SINE Alu 5 299 -14 2413 82 3 0 chr17 81747845 81748138 -3690342 - AluSp SINE Alu -19 294 1 445 277 45 59 chr17 81748971 81749173 -3689307 + HAL1 LINE L1 13 211 -2296 290 314 59 39 chr17 81750110 81750261 -3688219 + MIR3 SINE MIR 6 157 -51 400 234 11 0 chr17 81750270 81750364 -3688116 - MER5A DNA MER1_type 0 189 95 2212 113 0 16 chr17 81750396 81750705 -3687775 - AluSx SINE Alu -4 308 5 402 344 48 43 chr17 81750717 81751089 -3687391 - L2 LINE L2 -1880 1434 1061 2088 132 167 14 chr17 81751745 81752319 -3686161 - Tigger3(Golem) DNA MER2_type -3 3026 2336 2307 51 38 14 chr17 81752454 81752746 -3685734 + AluY SINE Alu 1 299 -12 553 278 41 6 chr17 81752828 81752997 -3685483 + MER104 DNA Tc2 1 175 -5 352 335 183 11 chr17 81753735 81753998 -3684482 + L2 LINE L2 2499 2806 -508 540 189 89 24 chr17 81754089 81754258 -3684222 + MER104 DNA MER2_type 1 180 0 472 278 8 15 chr17 81754593 81754726 -3683754 + MIR3 SINE MIR 68 199 -9 25 0 0 0 chr17 81754976 81755001 -3683479 + AT_rich Low_complexity Low_complexity 1 25 0 2935 140 90 66 chr17 81755046 81755559 -3682921 + L1MC2 LINE L1 5641 6140 -204 2233 107 14 0 chr17 81755559 81755849 -3682631 + AluSx SINE Alu 1 294 -18 2935 140 90 66 chr17 81755849 81755985 -3682495 + L1MC2 LINE L1 6140 6309 -35 2368 72 3 7 chr17 81755985 81756303 -3682177 + AluY SINE Alu 1 311 0 2935 140 90 66 chr17 81756303 81756330 -3682150 + L1MC2 LINE L1 6309 6334 -10 2087 109 54 14 chr17 81756528 81756822 -3681658 - AluSq SINE Alu -7 306 1 1810 187 3 7 chr17 81756826 81757126 -3681354 - AluJb SINE Alu -13 299 1 213 94 0 0 chr17 81757215 81757247 -3681233 + (GGA)n Simple_repeat Simple_repeat 2 33 0 809 176 0 0 chr17 81757362 81757498 -3680982 + MER2 DNA MER2_type 1 136 -209 804 174 0 36 chr17 81757507 81757645 -3680835 - FLAM_A SINE Alu -9 133 1 1033 153 17 72 chr17 81757646 81757882 -3680598 + MER2 DNA MER2_type 122 344 -1 333 216 187 14 chr17 81757982 81758121 -3680359 - MIR3 SINE MIR -7 201 39 289 268 124 0 chr17 81758465 81758562 -3679918 + MER58C DNA MER1_type 64 172 -43 32 0 0 0 chr17 81758748 81758780 -3679700 + AT_rich Low_complexity Low_complexity 1 32 0 2265 132 0 0 chr17 81758780 81759090 -3679390 + AluSx SINE Alu 1 310 -2 185 376 56 17 chr17 81759408 81759586 -3678894 + L2 LINE L2 2173 2357 -957 984 207 98 39 chr17 81759769 81760074 -3678406 + MER33 DNA MER1_type 2 324 0 389 284 72 39 chr17 81761846 81762054 -3676426 - L2 LINE L2 0 3313 3099 185 216 0 0 chr17 81762150 81762187 -3676293 - MIR SINE MIR -10 252 216 2339 90 3 13 chr17 81762221 81762531 -3675949 + AluSg SINE Alu 1 307 -3 497 255 37 100 chr17 81763623 81763879 -3674601 + MIR SINE MIR 13 252 -10 2207 110 3 3 chr17 81764720 81765020 -3673460 - AluSx SINE Alu -12 300 1 534 311 86 86 chr17 81766733 81767177 -3671303 + L2 LINE L2 2827 3270 -2 510 272 24 52 chr17 81767289 81767502 -3670978 + L2 LINE L2 2628 2834 -480 185 229 157 14 chr17 81768065 81768135 -3670345 + L2 LINE L2 3140 3219 -94 1290 106 0 29 chr17 81768137 81768344 -3670136 - L1PA14 LINE L1 -3 6158 5958 2264 204 102 45 chr17 81768654 81769417 -3669063 + L1ME2 LINE L1 5296 6102 -62 353 211 143 27 chr17 81769329 81769476 -3669004 + L1MA10 LINE L1 6171 6334 0 * 1575 167 39 4 chr17 81770476 81770757 -3667723 + AluJb SINE Alu 1 291 -21 2172 109 0 7 chr17 81770797 81771091 -3667389 + AluSc SINE Alu 1 292 -17 1906 112 0 64 chr17 81773505 81773847 -3664633 + AluSx SINE Alu 1 312 0 1001 6 0 60 chr17 81774008 81774176 -3664304 + (GAA)n Simple_repeat Simple_repeat 2 159 0 202 243 0 0 chr17 81774703 81774740 -3663740 - L2 LINE L2 -15 3257 3221 434 255 183 26 chr17 81774810 81774963 -3663517 - MIR SINE MIR -73 189 13 201 147 0 0 chr17 81775595 81775629 -3662851 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 248 265 0 60 chr17 81776396 81776479 -3662001 + CT-rich Low_complexity Low_complexity 1 78 0 526 161 11 0 chr17 81776775 81776868 -3661612 - AluJ/FLAM SINE Alu -218 94 1 539 279 217 19 chr17 81776885 81777456 -3661024 - HAL1 LINE L1 -1077 1430 747 834 104 24 32 chr17 81777914 81778039 -3660441 - FLAM_C SINE Alu -19 124 1 246 221 29 15 chr17 81779101 81779169 -3659311 - L1ME LINE L1 -299 5822 5754 265 295 78 47 chr17 81780218 81780347 -3658133 - L2 LINE L2 -1 3271 3139 267 378 24 0 chr17 81780444 81780571 -3657909 - L2 LINE L2 -2540 774 645 678 231 99 29 chr17 81780641 81781070 -3657410 + MLT1E LTR MaLR 39 589 -4 180 0 0 0 chr17 81781148 81781168 -3657312 + (CAA)n Simple_repeat Simple_repeat 3 22 0 386 320 27 7 chr17 81781441 81781588 -3656892 + L1ME LINE L1 326 475 -5595 993 254 180 28 chr17 81781603 81782345 -3656135 + L1ME LINE L1 389 1218 -4862 779 267 55 22 chr17 81782357 81782630 -3655850 + L1ME1 LINE L1 5865 6146 -20 23 0 0 0 chr17 81782666 81782689 -3655791 + AT_rich Low_complexity Low_complexity 1 23 0 2501 53 7 0 chr17 81782696 81782995 -3655485 + AluY SINE Alu 1 301 -10 244 207 126 11 chr17 81783917 81784004 -3654476 + MLT1K LTR MaLR 330 426 -162 1310 179 0 0 chr17 81784568 81784775 -3653705 - AluJo SINE Alu -21 291 85 866 128 32 0 chr17 81785143 81785299 -3653181 + LTR41 LTR ERVL 15 175 -598 529 210 171 75 chr17 81785400 81785652 -3652828 + LTR41 LTR ERVL 483 758 -15 2123 125 7 0 chr17 81786442 81786739 -3651741 - AluSx SINE Alu -13 299 1 2356 80 13 0 chr17 81787388 81787687 -3650793 + AluSx SINE Alu 1 303 -9 2655 23 3 0 chr17 81788131 81788432 -3650048 - AluY SINE Alu -9 302 1 409 289 138 9 chr17 81789072 81789290 -3649190 - MLT1J LTR MaLR -260 251 6 841 132 12 30 chr17 81789603 81789770 -3648710 - MER104 DNA Tc2 -16 164 1 819 356 164 11 chr17 81790116 81790852 -3647628 - L2 LINE L2 -359 2955 2107 299 224 51 97 chr17 81790905 81791101 -3647379 - L2 LINE L2 -19 3294 3108 697 261 103 52 chr17 81791105 81791530 -3646950 - MER20B DNA MER1_type -331 452 6 272 231 356 19 chr17 81791654 81791758 -3646722 - L2 LINE L2 -2 3311 3173 1491 129 36 103 chr17 81792278 81792580 -3645900 - AluJo SINE Alu -30 282 1 2303 99 0 19 chr17 81792670 81792984 -3645496 + AluSx SINE Alu 1 308 -4 469 274 119 49 chr17 81792984 81793465 -3645015 - L1ME4a LINE L1 -288 5833 5323 2323 98 13 0 chr17 81794208 81794515 -3643965 - AluSp SINE Alu -2 311 1 25 31 0 0 chr17 81794561 81794593 -3643887 + AT_rich Low_complexity Low_complexity 1 32 0 1313 212 70 47 chr17 81794771 81795033 -3643447 + MLT1E3 LTR MaLR 3 278 -346 2456 40 3 30 chr17 81795033 81795337 -3643143 - AluY SINE Alu -15 296 1 1313 212 70 47 chr17 81795337 81795461 -3643019 + MLT1E3 LTR MaLR 278 398 -226 310 138 0 17 chr17 81795490 81795548 -3642932 + MLT1E3 LTR MaLR 598 654 0 1516 162 48 38 chr17 81796121 81796411 -3642069 - AluJo SINE Alu -19 293 1 399 215 108 70 chr17 81796414 81796600 -3641880 - LTR50 LTR ERVL -602 193 1 1385 288 88 37 chr17 81796600 81797493 -3640987 - ERVL LTR ERVL -8 5756 4818 374 244 181 0 chr17 81797612 81797772 -3640708 - L1MEd LINE L1 -3619 2510 2322 316 220 27 75 chr17 81797773 81797811 -3640669 - L1MEd LINE L1 -4165 2145 2107 2141 121 3 0 chr17 81797811 81798100 -3640380 - AluSx SINE Alu -22 290 1 316 220 27 75 chr17 81798100 81798247 -3640233 - L1MEd LINE L1 -4203 2107 1969 320 186 212 35 chr17 81798282 81798383 -3640097 - MER105 DNA DNA -43 161 41 1235 199 59 48 chr17 81798383 81798739 -3639741 - MLT1A1 LTR MaLR 0 365 6 1031 213 14 14 chr17 81798747 81798963 -3639517 - MER58A DNA MER1_type -1 223 8 2012 151 13 0 chr17 81799096 81799408 -3639072 + MER21B LTR ERV1 1 316 -547 21 0 0 0 chr17 81799489 81799510 -3638970 + AT_rich Low_complexity Low_complexity 1 21 0 906 194 6 0 chr17 81799510 81799675 -3638805 + FRAM SINE Alu 1 166 0 2407 166 48 40 chr17 81799691 81800166 -3638314 + MER21A LTR ERV1 391 869 -62 588 176 44 37 chr17 81800171 81800307 -3638173 + MER21B LTR ERV1 726 862 -1 522 117 48 48 chr17 81800349 81800452 -3638028 - L1PA8 LINE L1 -1 6171 6069 1216 269 53 48 chr17 81800482 81801240 -3637240 - L1MEd LINE L1 -4471 1658 931 899 165 48 10 chr17 81801240 81801446 -3637034 - L1MA4 LINE L1 0 6300 6087 1216 269 53 48 chr17 81801446 81801603 -3636877 - L1MEd LINE L1 -5198 931 776 307 355 65 13 chr17 81802096 81802251 -3636229 - L1MEd LINE L1 -5901 218 56 2465 69 0 7 chr17 81802453 81802758 -3635722 + AluY SINE Alu 1 303 -8 212 171 0 0 chr17 81803091 81803126 -3635354 + MIR SINE MIR 222 256 -6 2348 125 0 0 chr17 81803690 81804003 -3634477 - AluSq SINE Alu 0 313 1 491 250 49 49 chr17 81804530 81804714 -3633766 - MIR SINE MIR -57 205 22 443 254 0 14 chr17 81805276 81805414 -3633066 + L1MA10 LINE L1 6199 6334 0 277 247 185 0 chr17 81805752 81805833 -3632647 + MIR SINE MIR 45 140 -68 703 177 0 0 chr17 81806027 81806140 -3632340 + FLAM_A SINE Alu 4 116 -17 284 310 89 0 chr17 81806177 81806335 -3632145 + L1M4 LINE L1 3292 3463 -2683 843 197 26 0 chr17 81806350 81806543 -3631937 - L1M4 LINE L1 -760 5386 5189 260 186 17 0 chr17 81806556 81806615 -3631865 + CT-rich Low_complexity Low_complexity 1 60 0 2719 228 31 15 chr17 81806623 81806667 -3631813 - L1M4 LINE L1 -1481 4665 4623 207 0 0 0 chr17 81806667 81806690 -3631790 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2719 228 31 15 chr17 81806690 81807445 -3631035 - L1M4 LINE L1 -1523 4623 3853 2133 107 3 7 chr17 81807445 81807736 -3630744 + AluSx SINE Alu 3 292 -20 1982 253 43 29 chr17 81807763 81808119 -3630361 - L1M4 LINE L1 -2472 3674 3325 2251 100 3 0 chr17 81808119 81808418 -3630062 - AluSx SINE Alu -12 300 1 1982 253 43 29 chr17 81808418 81808865 -3629615 - L1M4 LINE L1 -2821 3325 2859 403 248 9 0 chr17 81808880 81808985 -3629495 - L2 LINE L2 -831 2483 2378 265 197 113 0 chr17 81808985 81809056 -3629424 - L1 LINE L1 -2537 3609 3531 630 244 127 0 chr17 81809079 81809276 -3629204 - L2 LINE L2 -941 2373 2152 1205 196 32 5 chr17 81809619 81809838 -3628642 - AluJo SINE Alu -3 309 85 1168 85 223 0 chr17 81809863 81809966 -3628514 + MER30 DNA MER1_type 1 80 -150 222 37 0 0 chr17 81809966 81809993 -3628487 + (CA)n Simple_repeat Simple_repeat 2 28 0 1168 85 223 0 chr17 81809993 81810077 -3628403 + MER30 DNA MER1_type 80 230 0 1176 206 0 14 chr17 81810193 81810411 -3628069 + AluJb SINE Alu 94 308 -4 182 167 0 0 chr17 81810503 81810533 -3627947 - MER5C DNA MER1_type -5 319 290 2258 83 10 0 chr17 81811100 81811390 -3627090 + AluSx SINE Alu 2 294 -18 257 243 100 0 chr17 81811518 81811588 -3626892 + MIR SINE MIR 172 248 -14 2229 84 0 3 chr17 81812006 81812292 -3626188 + AluSx SINE Alu 1 285 -27 2077 99 3 3 chr17 81812317 81812634 -3625846 + AluSg SINE Alu 1 317 0 22 0 0 0 chr17 81813557 81813579 -3624901 + AT_rich Low_complexity Low_complexity 1 22 0 181 295 33 0 chr17 81814462 81814523 -3623957 - L2 LINE L2 0 3313 3251 452 234 62 8 chr17 81814744 81814872 -3623608 + MER103 DNA DNA 2 136 -30 435 325 94 15 chr17 81815117 81815320 -3623160 + MIR SINE MIR 2 220 -42 526 269 146 6 chr17 81815430 81815601 -3622879 + MIR SINE MIR 49 243 -19 22 70 0 0 chr17 81817250 81817293 -3621187 + AT_rich Low_complexity Low_complexity 1 43 0 2574 59 7 0 chr17 81819193 81819497 -3618983 + AluSq SINE Alu 1 306 -7 226 138 0 52 chr17 81821394 81821452 -3617028 + (CGG)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr17 81821481 81821502 -3616978 + GC_rich Low_complexity Low_complexity 1 21 0 219 36 0 0 chr17 81821537 81821565 -3616915 + (CGG)n Simple_repeat Simple_repeat 2 29 0 213 94 0 0 chr17 81821680 81821712 -3616768 + (CGG)n Simple_repeat Simple_repeat 2 33 0 271 273 16 8 chr17 81821765 81821886 -3616594 + (CGG)n Simple_repeat Simple_repeat 3 124 0 21 36 0 0 chr17 81822425 81822453 -3616027 + GC_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr17 81822467 81822503 -3615977 + GC_rich Low_complexity Low_complexity 1 36 0 2075 132 16 0 chr17 81824038 81824342 -3614138 + AluY SINE Alu 1 309 -2 797 333 79 52 chr17 81824347 81824926 -3613554 + L3 LINE CR1 804 1407 -170 722 143 0 0 chr17 81824926 81825045 -3613435 + L1PB1 LINE L1 6033 6151 0 797 333 79 52 chr17 81825045 81825161 -3613319 + L3 LINE CR1 1407 1518 -59 808 223 11 16 chr17 81825163 81825347 -3613133 + MER5A DNA MER1_type 1 183 -6 300 234 234 16 chr17 81825670 81825794 -3612686 - MER5A DNA MER1_type -4 185 35 244 268 141 0 chr17 81825864 81825935 -3612545 + MIR SINE MIR 58 138 -70 181 276 0 69 chr17 81825951 81826009 -3612471 - L2 LINE L2 -15 3298 3245 2056 142 3 3 chr17 81826320 81826623 -3611857 - AluSx SINE Alu -5 307 5 2262 171 33 9 chr17 81827589 81828044 -3610436 + MLT1C LTR MaLR 1 466 -1 288 248 0 0 chr17 81828390 81828491 -3609989 + (TG)n Simple_repeat Simple_repeat 2 102 0 406 320 40 11 chr17 81829482 81829657 -3608823 + L2 LINE L2 3134 3313 0 411 179 7 46 chr17 81829802 81829953 -3608527 + CT-rich Low_complexity Low_complexity 4 148 0 2191 101 0 11 chr17 81830056 81830342 -3608138 - AluSx SINE Alu -25 287 5 29 47 0 0 chr17 81830396 81830439 -3608041 + AT_rich Low_complexity Low_complexity 1 43 0 1324 263 135 19 chr17 81830498 81830978 -3607502 - MLT1F LTR MaLR -4 538 3 210 288 81 27 chr17 81831139 81831250 -3607230 + MIR3 SINE MIR 92 208 0 609 263 145 70 chr17 81831577 81831935 -3606545 + MLT1J2 LTR MaLR 59 443 -7 1964 163 0 3 chr17 81832285 81832574 -3605906 - AluJb SINE Alu -24 288 1 2070 125 3 41 chr17 81832615 81832934 -3605546 - AluSx SINE Alu -1 311 5 572 252 41 59 chr17 81832934 81832991 -3605489 - HAL1 LINE L1 -23 2484 2428 267 31 0 0 chr17 81832991 81833023 -3605457 + (CAA)n Simple_repeat Simple_repeat 2 33 0 572 252 41 59 chr17 81833023 81833255 -3605225 - HAL1 LINE L1 -79 2428 2200 338 278 122 0 chr17 81833644 81833759 -3604721 + L2 LINE L2 3134 3262 -10 2479 48 3 10 chr17 81833759 81834071 -3604409 + AluY SINE Alu 1 310 0 259 298 143 0 chr17 81834529 81834613 -3603867 + L2 LINE L2 3177 3272 0 2986 130 77 25 chr17 81834634 81834896 -3603584 - L1PB2 LINE L1 -1 6150 5903 2606 56 0 0 chr17 81834896 81835198 -3603282 + AluY SINE Alu 1 302 -9 2986 130 77 25 chr17 81835198 81835506 -3602974 - L1PB2 LINE L1 -248 5903 5550 285 29 0 0 chr17 81836231 81836265 -3602215 + (TG)n Simple_repeat Simple_repeat 2 35 0 449 284 103 87 chr17 81836527 81836897 -3601583 - L1ME4a LINE L1 -2 6119 5744 2294 118 0 0 chr17 81837046 81837352 -3601128 + AluSx SINE Alu 1 306 -6 253 242 0 0 chr17 81838768 81838834 -3599646 - MLT2B1 LTR ERVL 0 520 455 285 221 0 0 chr17 81838834 81838902 -3599578 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 1149 207 28 32 chr17 81838902 81838920 -3599560 - MLT2B3 LTR ERVL -20 534 517 2188 129 3 0 chr17 81838920 81839214 -3599266 + AluSx SINE Alu 1 295 -17 1149 207 28 32 chr17 81839214 81839480 -3599000 - MLT2B3 LTR ERVL -37 517 251 597 186 0 0 chr17 81839481 81839594 -3598886 - MLT2B3 LTR ERVL -441 113 1 369 220 11 44 chr17 81839609 81839700 -3598780 - MER45 DNA AcHobo -90 88 1 194 314 150 7 chr17 81839749 81839889 -3598591 + L2 LINE L2 3113 3272 0 368 253 101 80 chr17 81840662 81840887 -3597593 + L1ME4a LINE L1 5715 5934 -187 2355 113 0 0 chr17 81840887 81841197 -3597283 + AluSg SINE Alu 1 310 0 368 253 101 80 chr17 81841197 81841293 -3597187 + L1ME4a LINE L1 5934 6027 -94 2163 110 44 6 chr17 81841293 81841657 -3596823 - L1PA10 LINE L1 0 6168 5791 2131 144 0 0 chr17 81841666 81841978 -3596502 - AluJb SINE Alu 0 312 1 368 253 101 80 chr17 81841978 81842033 -3596447 + L1ME4a LINE L1 6034 6110 -11 351 0 0 0 chr17 81842681 81842720 -3595760 + (TTA)n Simple_repeat Simple_repeat 3 41 0 475 312 85 49 chr17 81842736 81842918 -3595562 + MLT1K LTR MaLR 164 338 -250 1701 96 9 0 chr17 81842918 81843136 -3595344 - AluSg/x SINE Alu -9 301 82 475 312 85 49 chr17 81843136 81843363 -3595117 + MLT1K LTR MaLR 338 588 0 225 345 85 17 chr17 81843363 81843540 -3594940 - L2 LINE L2 -97 3175 2987 4929 49 54 62 chr17 81844353 81845125 -3593355 + MER4E LTR ERV1 1 766 0 2283 120 0 0 chr17 81845942 81846242 -3592238 - AluSx SINE Alu -12 300 1 204 313 0 31 chr17 81846290 81846386 -3592094 + CT-rich Low_complexity Low_complexity 3 95 0 233 326 116 34 chr17 81846667 81846722 -3591758 + MIR SINE MIR 89 138 -124 2093 138 0 10 chr17 81846722 81847026 -3591454 - AluJo SINE Alu -7 305 5 233 326 116 34 chr17 81847026 81847117 -3591363 + MIR SINE MIR 138 247 -15 2241 97 0 57 chr17 81847525 81847856 -3590624 - AluSq SINE Alu -1 312 1 2077 157 3 3 chr17 81848036 81848348 -3590132 + AluJb SINE Alu 1 312 0 369 0 0 0 chr17 81848348 81848389 -3590091 + (TA)n Simple_repeat Simple_repeat 2 42 0 2394 106 0 3 chr17 81848396 81848708 -3589772 + AluSx SINE Alu 1 311 -1 321 250 23 39 chr17 81849797 81849925 -3588555 + (GGGTG)n Simple_repeat Simple_repeat 3 128 0 1670 167 91 11 chr17 81851792 81852121 -3586359 - AluJb SINE Alu 0 352 1 221 288 0 0 chr17 81852229 81852288 -3586192 + L2 LINE L2 3161 3219 -94 2094 130 0 3 chr17 81852794 81853093 -3585387 - AluSq SINE Alu -11 302 5 2251 198 12 19 chr17 81853347 81853832 -3584648 + MER66B LTR ERV1 1 482 -4 201 74 0 0 chr17 81854383 81854410 -3584070 + (TGAG)n Simple_repeat Simple_repeat 1 27 0 182 245 38 0 chr17 81854555 81854608 -3583872 - L2 LINE L2 -1 3312 3258 378 107 0 0 chr17 81854720 81854776 -3583704 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 2529 78 0 10 chr17 81854776 81855085 -3583395 - AluSp SINE Alu -7 306 1 1946 173 6 13 chr17 81856226 81856538 -3581942 - AluJb SINE Alu 0 312 3 2667 192 82 17 chr17 81857379 81857913 -3580567 + MER97b DNA MER1_type? 40 626 -427 2155 125 0 3 chr17 81857913 81858208 -3580272 + AluSq SINE Alu 1 294 -19 2667 192 82 17 chr17 81858208 81858328 -3580152 + MER97b DNA MER1_type? 626 737 -316 1801 173 44 124 chr17 81858375 81858454 -3580026 - MLT1D LTR MaLR 0 505 421 1566 158 4 0 chr17 81858454 81858694 -3579786 - AluJo SINE Alu -27 285 45 1801 173 44 124 chr17 81858694 81859163 -3579317 - MLT1D LTR MaLR -84 421 1 236 111 22 0 chr17 81859295 81859340 -3579140 + (TG)n Simple_repeat Simple_repeat 1 46 0 2353 86 0 17 chr17 81859578 81859742 -3578738 - AluSq SINE Alu -16 297 139 2225 98 10 26 chr17 81859742 81860077 -3578403 - AluY SINE Alu 0 311 1 2353 86 0 17 chr17 81860077 81860214 -3578266 - AluSq SINE Alu -174 139 1 962 108 0 0 chr17 81860219 81860348 -3578132 - AluSq/x SINE Alu -183 129 1 25 31 0 0 chr17 81860353 81860385 -3578095 + AT_rich Low_complexity Low_complexity 1 32 0 968 124 43 25 chr17 81860389 81860550 -3577930 - U1 snRNA snRNA -1 164 1 226 246 35 0 chr17 81860554 81860611 -3577869 - L2 LINE L2 -45 3268 3210 230 311 115 0 chr17 81860632 81860754 -3577726 + L2 LINE L2 3169 3304 -9 1175 182 117 68 chr17 81860853 81861282 -3577198 - LTR7 LTR ERV1 0 450 1 1444 77 0 0 chr17 81861404 81861599 -3576881 - HERVH LTR ERV1 -5334 2379 2185 2812 32 0 0 chr17 81861601 81861912 -3576568 + AluY SINE Alu 1 311 0 810 97 0 9 chr17 81862918 81863031 -3575449 - AluY SINE Alu -117 194 83 336 271 33 0 chr17 81863047 81863198 -3575282 + CT-rich Low_complexity Low_complexity 4 159 0 1262 173 33 103 chr17 81863299 81863634 -3574846 + AluJo SINE Alu 5 318 0 336 281 56 83 chr17 81863967 81864305 -3574175 + MLT1B LTR MaLR 2 330 -60 2280 119 3 0 chr17 81864342 81864652 -3573828 - AluSx SINE Alu -1 311 1 2324 100 3 0 chr17 81864652 81864953 -3573527 - AluSx SINE Alu -10 302 1 652 306 100 48 chr17 81864953 81865356 -3573124 + L2 LINE L2 259 639 -2675 1556 173 3 79 chr17 81865356 81865488 -3572992 + AluJo SINE Alu 6 146 -166 1993 150 7 0 chr17 81865488 81865781 -3572699 + AluJb SINE Alu 1 295 -17 2343 82 0 7 chr17 81865788 81866082 -3572398 + AluSc SINE Alu 3 294 -15 1043 182 0 0 chr17 81866089 81866270 -3572210 + AluJb SINE Alu 129 309 -3 652 306 100 48 chr17 81866270 81866324 -3572156 + L2 LINE L2 639 740 -2574 2407 80 0 0 chr17 81866433 81866745 -3571735 - AluSx SINE Alu 0 312 1 183 42 0 0 chr17 81866770 81866794 -3571686 + (CATCC)n Simple_repeat Simple_repeat 1 24 0 798 161 21 21 chr17 81867277 81867420 -3571060 - AluJb SINE Alu -39 273 131 705 189 0 16 chr17 81867437 81867559 -3570921 + AluSg/x SINE Alu 123 242 -67 * 756 165 8 8 chr17 81867557 81867684 -3570796 - FLAM_C SINE Alu -7 136 10 436 239 111 8 chr17 81867719 81867836 -3570644 + L2 LINE L2 3185 3313 0 185 286 100 0 chr17 81868726 81868796 -3569684 + L2 LINE L2 10 86 -3228 299 303 35 49 chr17 81869095 81869237 -3569243 - MIR3 SINE MIR -47 161 22 2181 95 27 0 chr17 81869708 81870004 -3568476 + AluSx SINE Alu 2 305 -7 264 347 56 7 chr17 81870004 81870148 -3568332 + MLT1D LTR MaLR 32 182 -323 2016 125 0 22 chr17 81872512 81872831 -3565649 + AluSx SINE Alu 1 312 0 497 160 21 2 chr17 81873001 81873102 -3565378 - MER5A DNA MER1_type -78 105 11 411 195 156 45 chr17 81873481 81873635 -3564845 + MER5B DNA MER1_type 6 176 -2 283 231 0 0 chr17 81874101 81874166 -3564314 + MIR SINE MIR 29 93 -169 265 222 111 11 chr17 81874287 81874377 -3564103 - Charlie7 DNA MER1_type -1 2611 2513 225 157 34 11 chr17 81874429 81874518 -3563962 - Charlie7 DNA MER1_type -100 2512 2422 1458 168 4 8 chr17 81875455 81875711 -3562769 - AluJo SINE Alu -12 300 46 2135 92 3 30 chr17 81875740 81876043 -3562437 - AluSq SINE Alu -16 297 3 987 98 0 0 chr17 81876055 81876188 -3562292 - AluSq/x SINE Alu -179 133 1 589 134 25 50 chr17 81876208 81876327 -3562153 - AluJo SINE Alu -176 136 21 1326 138 198 8 chr17 81878763 81879016 -3559464 - AluSg1 SINE Alu -8 301 1 1716 157 13 36 chr17 81879308 81879613 -3558867 - AluJb SINE Alu -12 300 3 2205 106 13 0 chr17 81879718 81880020 -3558460 - AluSx SINE Alu -6 306 1 276 59 176 0 chr17 81880245 81880296 -3558184 + FRAM/FAM SINE Alu 24 83 -83 236 323 42 0 chr17 81880335 81880431 -3558049 + MIR SINE MIR 86 185 -77 369 213 37 28 chr17 81881108 81881216 -3557264 + MIR SINE MIR 85 193 -69 241 358 0 0 chr17 81881476 81881641 -3556839 + (CA)n Simple_repeat Simple_repeat 1 165 0 427 270 135 12 chr17 81882425 81882588 -3555892 - MIR SINE MIR -33 229 47 194 241 103 0 chr17 81884441 81884527 -3553953 + MIR SINE MIR 48 146 -62 330 231 37 56 chr17 81886339 81886447 -3552033 + MIR SINE MIR 66 171 -91 35 41 0 0 chr17 81886906 81886955 -3551525 + GC_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr17 81886970 81886992 -3551488 + GC_rich Low_complexity Low_complexity 1 22 0 206 206 16 32 chr17 81887428 81887491 -3550989 + G-rich Low_complexity Low_complexity 2 63 0 189 121 0 0 chr17 81889859 81889892 -3548588 + (CCCGG)n Simple_repeat Simple_repeat 5 37 0 260 296 12 0 chr17 81891833 81891914 -3546566 + (TCCA)n Simple_repeat Simple_repeat 3 84 0 614 213 0 13 chr17 81891920 81892158 -3546322 + (CCCA)n Simple_repeat Simple_repeat 1 234 0 815 190 0 7 chr17 81892158 81892458 -3546022 + (TCCA)n Simple_repeat Simple_repeat 1 297 0 316 323 30 0 chr17 81892616 81892749 -3545731 - L2 LINE L2 -215 3057 2921 2255 105 0 0 chr17 81895328 81895632 -3542848 + AluSx SINE Alu 1 304 -8 29 47 0 0 chr17 81895786 81895829 -3542651 + AT_rich Low_complexity Low_complexity 1 43 0 1921 133 0 42 chr17 81895837 81896145 -3542335 + AluJb SINE Alu 1 295 -17 2313 57 3 3 chr17 81897208 81897515 -3540965 - AluY SINE Alu 0 307 1 1799 136 24 3 chr17 81898899 81899186 -3539294 - AluSx SINE Alu -19 293 1 1918 137 20 7 chr17 81899215 81899514 -3538966 + AluJo SINE Alu 1 303 -9 1355 114 139 13 chr17 81899516 81899753 -3538727 + AluSc SINE Alu 3 269 -40 306 249 0 124 chr17 81899871 81900209 -3538271 + C-rich Low_complexity Low_complexity 1 295 0 306 246 0 126 chr17 81900228 81900419 -3538061 + C-rich Low_complexity Low_complexity 2 168 0 306 246 0 126 chr17 81900438 81900629 -3537851 + C-rich Low_complexity Low_complexity 2 168 0 1489 215 57 46 chr17 81901778 81902253 -3536227 + MLT1D LTR MaLR 23 502 -3 382 200 118 9 chr17 81902270 81902380 -3536100 - MIR SINE MIR -108 154 33 838 258 48 11 chr17 81905001 81905269 -3533211 + MLT2C1 LTR ERVL 1 278 -119 203 245 0 20 chr17 81905640 81905689 -3532791 - MER5B DNA MER1_type 0 178 131 560 215 117 37 chr17 81905689 81905786 -3532694 + AluJo SINE Alu 121 238 -74 1388 143 167 0 chr17 81905786 81906038 -3532442 - AluSq SINE Alu -16 297 4 560 215 117 37 chr17 81906038 81906103 -3532377 + AluJo SINE Alu 238 296 -16 341 204 28 162 chr17 81906104 81906184 -3532296 - MER5B DNA MER1_type -55 123 69 2236 100 3 0 chr17 81906184 81906483 -3531997 - AluSp SINE Alu -13 300 1 341 204 28 162 chr17 81906483 81906544 -3531936 - MER5B DNA MER1_type -109 69 1 791 151 16 0 chr17 81906627 81906753 -3531727 - FRAM SINE Alu -18 158 31 1177 147 21 50 chr17 81907185 81907423 -3531057 + AluJb SINE Alu 70 300 -12 32 26 0 0 chr17 81907449 81907488 -3530992 + AT_rich Low_complexity Low_complexity 1 39 0 235 353 66 0 chr17 81907593 81907715 -3530765 + L2 LINE L2 2920 3049 -223 221 152 15 30 chr17 81908982 81909048 -3529432 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 189 94 0 0 chr17 81909367 81909399 -3529081 + (T)n Simple_repeat Simple_repeat 1 32 0 387 298 146 0 chr17 81909589 81909760 -3528720 - L1MDa LINE L1 -3941 2599 2404 28 48 0 0 chr17 81910004 81910046 -3528434 + AT_rich Low_complexity Low_complexity 1 42 0 183 80 0 0 chr17 81910611 81910636 -3527844 + (CA)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr17 81910801 81910829 -3527651 + AT_rich Low_complexity Low_complexity 1 28 0 1529 165 12 40 chr17 81912270 81912597 -3525883 + MLT1B LTR MaLR 1 318 -72 804 107 9 0 chr17 81913303 81913415 -3525065 - FLAM_C SINE Alu -30 113 1 462 78 0 0 chr17 81914240 81914304 -3524176 + THE1B LTR MaLR 1 64 -300 3105 93 37 10 chr17 81914309 81914792 -3523688 + MER9 LTR ERVK 16 511 0 9712 93 41 5 chr17 81914793 81915196 -3523284 + THE1B-int LTR MaLR 53 440 -1140 2371 100 0 0 chr17 81915196 81915506 -3522974 + AluSq SINE Alu 1 310 -3 9712 93 41 5 chr17 81915506 81916577 -3521903 + THE1B-int LTR MaLR 440 1580 0 1200 393 130 3 chr17 81916577 81916900 -3521580 + THE1B LTR MaLR 1 364 0 24 32 0 0 chr17 81916913 81916944 -3521536 + AT_rich Low_complexity Low_complexity 1 31 0 1096 166 23 0 chr17 81916944 81917119 -3521361 - AluJo SINE Alu -50 262 84 854 202 6 6 chr17 81918995 81919163 -3519317 - FAM SINE Alu -7 168 1 237 274 0 0 chr17 81919656 81919718 -3518762 - MER91 DNA MER1_type -78 62 1 1372 205 7 10 chr17 81919795 81920092 -3518388 - L1PA15 LINE L1 0 6165 5870 309 104 0 0 chr17 81920121 81920169 -3518311 + AluSx SINE Alu 1 48 -252 1963 153 0 23 chr17 81920169 81920470 -3518010 - AluJb SINE Alu -18 294 1 2326 109 0 3 chr17 81921492 81921803 -3516677 + AluSx SINE Alu 1 310 -2 1832 111 8 15 chr17 81922005 81922266 -3516214 + AluSx SINE Alu 54 312 0 824 163 82 0 chr17 81923514 81923676 -3514804 - AluJb SINE Alu 0 309 137 1163 71 7 0 chr17 81924934 81925074 -3513406 - AluSp/q SINE Alu -15 298 158 716 276 100 31 chr17 81925896 81926215 -3512265 - MER102b DNA MER1_type 0 341 1 2461 104 0 0 chr17 81927009 81927317 -3511163 + AluSx SINE Alu 1 308 -4 245 206 16 32 chr17 81927444 81927507 -3510973 - MIR SINE MIR -1 261 200 702 205 54 12 chr17 81927507 81927673 -3510807 + FRAM SINE Alu 1 169 -7 340 179 131 0 chr17 81927673 81927757 -3510723 - MIR SINE MIR -55 207 113 582 131 107 25 chr17 81927765 81927887 -3510593 + FLAM_C SINE Alu 11 142 -1 300 316 26 18 chr17 81927887 81928001 -3510479 - MIR SINE MIR -135 127 13 919 146 0 7 chr17 81928859 81928996 -3509484 + FLAM_C SINE Alu 1 136 -7 2531 90 0 0 chr17 81929917 81930227 -3508253 - AluSg SINE Alu 0 310 1 809 162 7 0 chr17 81931003 81931157 -3507323 + GA-rich Low_complexity Low_complexity 1 155 0 264 224 0 0 chr17 81931182 81931249 -3507231 + GA-rich Low_complexity Low_complexity 3 69 0 353 259 112 9 chr17 81932540 81932656 -3505824 + L2 LINE L2 3145 3272 0 289 193 105 70 chr17 81932672 81932786 -3505694 - MLT1I LTR MaLR -17 392 275 1871 142 13 54 chr17 81933955 81934347 -3504133 + AluSx SINE Alu 1 379 0 249 97 0 65 chr17 81934338 81934400 -3504080 + (GGGAA)n Simple_repeat Simple_repeat 3 60 0 1411 235 102 30 chr17 81934828 81934980 -3503500 + MLT1C LTR MaLR 7 147 -320 2341 105 0 0 chr17 81934980 81935284 -3503196 - AluSx SINE Alu -8 304 1 1411 235 102 30 chr17 81935284 81935561 -3502919 + MLT1C LTR MaLR 147 467 0 1413 178 89 4 chr17 81936576 81936845 -3501635 - AluJo SINE Alu -20 292 1 209 293 36 122 chr17 81937733 81938037 -3500443 - L2 LINE L2 -3 3269 2992 1710 139 132 0 chr17 81940384 81940650 -3497830 + AluJb SINE Alu 1 301 -11 304 231 97 45 chr17 81940683 81940817 -3497663 + MIR SINE MIR 45 185 -77 2443 88 11 3 chr17 81940847 81940877 -3497603 - L1MA1 LINE L1 -4 6298 6270 309 26 0 0 chr17 81940877 81940915 -3497565 + (TA)n Simple_repeat Simple_repeat 2 39 0 2443 88 11 3 chr17 81940915 81941246 -3497234 - L1MA1 LINE L1 -32 6270 5934 2230 111 0 0 chr17 81941255 81941553 -3496927 - AluSx SINE Alu -14 298 1 405 0 0 0 chr17 81941641 81941686 -3496794 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1353 122 0 0 chr17 81941880 81942060 -3496420 + AluSg/x SINE Alu 129 308 -4 2309 95 0 3 chr17 81942102 81942398 -3496082 - AluSq SINE Alu -11 302 8 446 145 24 0 chr17 81943433 81943516 -3494964 - MIR SINE MIR -133 129 45 2447 85 0 3 chr17 81945683 81945988 -3492492 - AluY SINE Alu -6 305 2 1589 168 32 38 chr17 81946435 81946781 -3491699 + MLT1A2 LTR MaLR 1 344 -30 480 296 51 75 chr17 81947365 81947474 -3491006 - MIR SINE MIR -5 257 147 1858 119 49 80 chr17 81947474 81947861 -3490619 + THE1C LTR MaLR 1 375 0 480 296 51 75 chr17 81947861 81948004 -3490476 - MIR SINE MIR -115 147 11 835 200 68 11 chr17 81948179 81948369 -3490111 - MLT1E LTR MaLR -2 591 391 287 297 51 8 chr17 81948599 81948717 -3489763 + L2 LINE L2 3191 3313 0 2248 115 0 0 chr17 81948887 81949192 -3489288 + AluSx SINE Alu 8 312 0 246 81 0 0 chr17 81949533 81949570 -3488910 + (A)n Simple_repeat Simple_repeat 1 37 0 347 295 74 47 chr17 81950109 81950299 -3488181 + L1MC4 LINE L1 6521 6715 -1327 370 220 22 55 chr17 81950320 81950411 -3488069 + L1MC4 LINE L1 6614 6701 -1341 425 321 78 16 chr17 81950548 81950741 -3487739 - MIR SINE MIR -35 227 23 201 125 50 25 chr17 81950877 81950897 -3487583 + (AGATG)n Simple_repeat Simple_repeat 1 19 -22 2198 73 0 0 chr17 81950897 81951156 -3487324 + AluSc SINE Alu 46 304 -5 201 125 50 25 chr17 81951156 81951175 -3487305 + (AGATG)n Simple_repeat Simple_repeat 19 41 0 433 310 29 12 chr17 81952342 81952513 -3485967 + MIR SINE MIR 23 196 -66 2694 58 0 0 chr17 81952559 81952868 -3485612 - AluY SINE Alu -2 309 1 184 260 182 6 chr17 81953048 81953229 -3485251 - L2 LINE L2 -207 3065 2853 225 65 0 0 chr17 81953626 81953657 -3484823 + (TC)n Simple_repeat Simple_repeat 1 31 0 270 0 0 0 chr17 81953660 81953690 -3484790 + (CA)n Simple_repeat Simple_repeat 2 31 0 204 216 0 0 chr17 81953882 81953919 -3484561 + (CA)n Simple_repeat Simple_repeat 2 38 0 254 337 20 20 chr17 81954150 81954251 -3484229 + L2 LINE L2 3208 3308 -5 17684 63 0 30 chr17 81955650 81958512 -3479968 + L1PA6 LINE L1 2954 5795 -359 2702 55 0 0 chr17 81958512 81958822 -3479658 + AluY SINE Alu 2 311 0 17684 63 0 30 chr17 81958822 81959170 -3479310 + L1PA6 LINE L1 5795 6152 -2 2267 102 20 0 chr17 81959208 81959501 -3478979 + AluSq SINE Alu 1 299 -14 459 241 30 30 chr17 81959501 81959623 -3478857 - MER5B DNA MER1_type -53 125 1 200 262 16 0 chr17 81959982 81960043 -3478437 + MIR SINE MIR 151 212 -50 570 172 33 16 chr17 81960731 81960853 -3477627 + MIR SINE MIR 107 230 -32 180 111 0 0 chr17 81961650 81961677 -3476803 + (T)n Simple_repeat Simple_repeat 1 27 0 313 113 0 32 chr17 81962757 81962819 -3475661 + (GGA)n Simple_repeat Simple_repeat 3 62 0 2180 92 15 0 chr17 81962921 81963192 -3475288 - AluSx SINE Alu -37 275 1 1071 161 31 10 chr17 81963427 81963619 -3474861 + MER105 DNA DNA 1 196 -8 690 182 8 15 chr17 81963691 81963823 -3474657 + FLAM_A SINE Alu 1 131 -2 6590 77 28 0 chr17 81964246 81965119 -3473361 + MER11D LTR ERVK 1 897 0 212 143 24 0 chr17 81965207 81965249 -3473231 + GA-rich Low_complexity Low_complexity 3 45 0 249 263 25 12 chr17 81965437 81965517 -3472963 + MLT1J LTR MaLR 119 199 -312 323 254 34 25 chr17 81965585 81965703 -3472777 + MLT1J LTR MaLR 393 511 0 1769 179 58 3 chr17 81965890 81966236 -3472244 + MLT1A1 LTR MaLR 1 365 0 2392 88 3 3 chr17 81966723 81967028 -3471452 - AluSp SINE Alu -7 306 2 1994 125 0 0 chr17 81967938 81968091 -3470389 - AluSx SINE Alu -23 289 134 1967 105 7 7 chr17 81968091 81968376 -3470104 - AluSg SINE Alu -18 292 8 1994 125 0 0 chr17 81968376 81968511 -3469969 - AluSx SINE Alu -177 135 1 252 224 194 0 chr17 81970370 81970437 -3468043 + MER116 DNA Mariner 1 80 0 182 231 0 0 chr17 81970491 81970530 -3467950 - L2 LINE L2 -16 3256 3218 428 167 31 115 chr17 81970602 81970794 -3467686 + MER53 DNA DNA 1 176 -13 2372 80 3 0 chr17 81970945 81971256 -3467224 - AluSx SINE Alu 0 312 1 267 314 97 27 chr17 81972334 81972519 -3465961 + L2 LINE L2 2907 3104 -209 328 296 34 0 chr17 81972520 81972608 -3465872 - L2 LINE L2 -18 3254 3164 1785 221 88 9 chr17 81972758 81973179 -3465301 - MER82 DNA MER2_type 0 653 200 1252 158 38 0 chr17 81973397 81973606 -3464874 - MER82 DNA MER2_type -435 218 2 21 57 0 0 chr17 81973606 81973641 -3464839 + AT_rich Low_complexity Low_complexity 1 35 0 782 148 0 16 chr17 81974460 81974588 -3463892 - AluJb SINE Alu -184 128 3 1600 117 121 8 chr17 81975503 81975767 -3462713 + AluJo SINE Alu 1 294 -18 368 266 177 45 chr17 81977133 81977330 -3461150 - L1MC4a LINE L1 -1637 6171 6001 186 103 0 0 chr17 81977330 81977359 -3461121 + (CA)n Simple_repeat Simple_repeat 1 29 0 368 266 177 45 chr17 81977359 81977585 -3460895 - L1MC4a LINE L1 -1807 6001 5692 782 165 117 78 chr17 81977594 81977800 -3460680 + AluJo SINE Alu 94 307 -5 225 278 107 83 chr17 81977807 81978012 -3460468 - L1MC4a LINE L1 -2338 5470 5261 355 313 141 22 chr17 81978029 81978256 -3460224 - L1MC4a LINE L1 -906 5240 4987 2162 95 0 20 chr17 81978374 81978679 -3459801 - AluSx SINE Alu -13 299 1 1269 174 118 24 chr17 81978712 81979171 -3459309 - Charlie1 DNA MER1_type -7 2754 5 1834 142 17 10 chr17 81979834 81980122 -3458358 - AluJo SINE Alu -14 298 9 643 186 0 0 chr17 81980141 81980243 -3458237 - U6 snRNA snRNA -4 103 2 289 193 0 0 chr17 81980358 81980415 -3458065 - MER5A DNA MER1_type -93 96 40 2147 98 14 0 chr17 81980947 81981242 -3457238 - AluSx SINE Alu -13 299 1 1551 188 10 20 chr17 81981821 81982124 -3456356 - AluJb SINE Alu -12 300 1 559 157 130 9 chr17 81982665 81982780 -3455700 - FLAM_A SINE Alu -4 129 1 1369 121 29 5 chr17 81982800 81983006 -3455474 + AluSx SINE Alu 1 211 -101 701 119 0 0 chr17 81983049 81983150 -3455330 + AluSx SINE Alu 200 300 -9 1619 146 148 58 chr17 81983694 81983904 -3454576 + Tigger2a DNA MER2_type 1 191 -2517 248 53 26 0 chr17 81983904 81983942 -3454538 + (TA)n Simple_repeat Simple_repeat 1 39 0 1948 130 3 0 chr17 81983942 81984227 -3454253 - AluSx SINE Alu -26 286 1 1619 146 148 58 chr17 81984227 81984413 -3454067 + Tigger2a DNA MER2_type 190 434 0 809 224 43 12 chr17 81985494 81985655 -3452825 - FAM SINE Alu -9 166 1 1052 107 5 25 chr17 81986514 81986728 -3451752 + AluSx SINE Alu 55 307 -3 195 271 34 17 chr17 81986737 81986796 -3451684 - L2 LINE L2 -4 3268 3209 1903 136 10 7 chr17 81987316 81987625 -3450855 - AluJo SINE Alu -2 310 1 2271 81 0 7 chr17 81990426 81990723 -3447757 + AluY SINE Alu 1 295 -16 2202 110 0 0 chr17 81990733 81991032 -3447448 + AluSx SINE Alu 1 299 -13 897 142 0 0 chr17 81991041 81991168 -3447312 + FLAM_C SINE Alu 1 127 -6 222 263 289 0 chr17 81991321 81991435 -3447045 + MIR SINE MIR 82 228 -34 1859 143 501 7 chr17 81991573 81992134 -3446346 + Tigger3b DNA MER2_type 2 839 -392 360 303 0 0 chr17 81992288 81992463 -3446017 + (TAGTG)n Simple_repeat Simple_repeat 2 176 0 204 354 0 0 chr17 81992643 81992821 -3445659 + (CAGTA)n Simple_repeat Simple_repeat 3 180 0 2686 136 27 0 chr17 81992878 81993283 -3445197 + Tigger3b DNA MER2_type 816 1231 0 751 136 0 17 chr17 81993304 81993422 -3445058 - FLAM_A SINE Alu -8 134 19 2254 101 3 0 chr17 81993535 81993843 -3444637 - AluSx SINE Alu -3 309 1 480 204 147 141 chr17 81994017 81994336 -3444144 - Charlie8 DNA MER1_type -2160 257 1 458 291 39 11 chr17 81994644 81994823 -3443657 + L2 LINE L2 3111 3294 -19 243 140 0 0 chr17 81995813 81995863 -3442617 + (TGG)n Simple_repeat Simple_repeat 3 52 0 284 185 62 49 chr17 81998563 81998644 -3439836 - MER103 DNA DNA -27 139 58 464 259 91 29 chr17 82000376 82000713 -3437767 + L1P5 LINE L1 4906 5293 -858 2118 102 14 0 chr17 82000713 82001008 -3437472 + AluSx SINE Alu 1 299 -13 464 259 91 29 chr17 82001008 82001171 -3437309 + L1P5 LINE L1 5293 5444 -707 726 212 0 0 chr17 82001295 82001465 -3437015 + (CCCA)n Simple_repeat Simple_repeat 3 172 0 * 835 169 11 0 chr17 82001450 82001627 -3436853 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 198 248 17 111 chr17 82002390 82002507 -3435973 - MIR SINE MIR -86 122 17 282 56 0 0 chr17 82003083 82003119 -3435361 + (GA)n Simple_repeat Simple_repeat 1 36 0 246 179 0 0 chr17 82003295 82003334 -3435146 - MIR SINE MIR -60 148 110 203 167 28 0 chr17 82004393 82004429 -3434051 + CT-rich Low_complexity Low_complexity 1 37 0 288 369 0 20 chr17 82004433 82004582 -3433898 + (CA)n Simple_repeat Simple_repeat 1 146 0 271 353 0 27 chr17 82004649 82004833 -3433647 + (CA)n Simple_repeat Simple_repeat 1 179 0 205 298 39 19 chr17 82004785 82004889 -3433591 + (CATA)n Simple_repeat Simple_repeat 1 106 0 * 231 217 22 0 chr17 82005487 82005533 -3432947 - MER91C DNA MER1_type -61 79 33 287 265 200 70 chr17 82005790 82006005 -3432475 - MIR SINE MIR -7 255 13 219 103 0 0 chr17 82006109 82006148 -3432332 + (CCTG)n Simple_repeat Simple_repeat 2 40 0 278 159 48 16 chr17 82007164 82007227 -3431253 + L2 LINE L2 3207 3271 -1 909 143 0 0 chr17 82007705 82007838 -3430642 + AluJo SINE Alu 1 133 -169 1070 137 0 6 chr17 82007867 82008035 -3430445 + AluJo SINE Alu 117 283 -29 1586 242 50 0 chr17 82008075 82008438 -3430042 + L1ME1 LINE L1 5782 6162 -4 2125 113 0 0 chr17 82009855 82010146 -3428334 - AluSx SINE Alu -12 300 10 487 244 183 64 chr17 82010540 82010900 -3427580 - MLT1H1 LTR MaLR -46 509 107 284 340 116 34 chr17 82010919 82011360 -3427120 + L2 LINE L2 1913 2389 -925 220 296 0 14 chr17 82011886 82011957 -3426523 + C-rich Low_complexity Low_complexity 3 72 0 323 270 185 11 chr17 82012024 82012202 -3426278 - MIR SINE MIR -20 242 34 924 185 0 0 chr17 82013607 82013912 -3424568 + (TG)n Simple_repeat Simple_repeat 1 305 0 1806 175 22 62 chr17 82014066 82014471 -3424009 + MLT1B LTR MaLR 2 390 0 461 198 9 9 chr17 82014568 82014674 -3423806 - MER113 DNA MER1_type? -120 401 296 2451 186 11 82 chr17 82014674 82015060 -3423420 - L1MB5 LINE L1 -9 6165 5838 2018 111 6 25 chr17 82015060 82015375 -3423105 - AluSx SINE Alu -3 309 1 2451 186 11 82 chr17 82015375 82015610 -3422870 - L1MB5 LINE L1 -336 5838 5588 405 270 87 27 chr17 82015615 82015800 -3422680 - MER113 DNA MER1_type? -205 316 121 1861 135 0 0 chr17 82015807 82016081 -3422399 - AluSx SINE Alu -18 294 21 1542 146 61 11 chr17 82016132 82016250 -3422230 + AluJb SINE Alu 1 112 -200 230 0 33 0 chr17 82016250 82016280 -3422200 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1542 146 61 11 chr17 82016280 82016441 -3422039 + AluJb SINE Alu 112 294 -18 418 261 18 27 chr17 82016441 82016552 -3421928 + L2 LINE L2 3202 3311 -2 309 219 34 0 chr17 82016689 82016775 -3421705 + MIR SINE MIR 61 152 -56 255 273 0 23 chr17 82017111 82017199 -3421281 - MIR SINE MIR -120 142 57 633 179 0 0 chr17 82018044 82018167 -3420313 + (CA)n Simple_repeat Simple_repeat 2 124 0 256 350 21 0 chr17 82018753 82018850 -3419630 + MIR3 SINE MIR 58 156 -52 2850 158 55 4 chr17 82019042 82019568 -3418912 - MER74A LTR ERVL -3 555 3 2329 62 3 0 chr17 82019611 82019899 -3418581 - AluSp SINE Alu -24 289 1 227 128 0 26 chr17 82019935 82019974 -3418506 - Alu SINE Alu -10 165 128 2804 188 26 26 chr17 82019974 82020349 -3418131 - L1MC2 LINE L1 -7 6337 5960 1852 125 10 28 chr17 82020349 82020637 -3417843 - AluSx SINE Alu -29 283 1 2804 188 26 26 chr17 82020637 82020837 -3417643 - L1MC2 LINE L1 -383 5961 5762 525 147 0 0 chr17 82021579 82021674 -3416806 + (TG)n Simple_repeat Simple_repeat 2 96 0 185 250 113 0 chr17 82023119 82023199 -3415281 + MIR SINE MIR 31 119 -89 795 223 23 6 chr17 82023642 82023817 -3414663 - MIR SINE MIR -39 223 46 231 300 0 0 chr17 82024308 82024438 -3414042 + (TG)n Simple_repeat Simple_repeat 1 130 0 594 197 0 0 chr17 82025114 82025261 -3413219 + (TCCA)n Simple_repeat Simple_repeat 2 148 0 389 238 14 0 chr17 82025300 82025447 -3413033 + (TCCA)n Simple_repeat Simple_repeat 4 152 0 284 268 0 8 chr17 82025462 82025589 -3412891 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 855 149 18 0 chr17 82025609 82025777 -3412703 + (TCCA)n Simple_repeat Simple_repeat 4 174 0 287 353 194 0 chr17 82026165 82026304 -3412176 - MIR SINE MIR -4 258 93 371 266 44 18 chr17 82026307 82026420 -3412060 + MIR SINE MIR 32 147 -115 1302 136 3 6 chr17 82028116 82028468 -3410012 + (TGGA)n Simple_repeat Simple_repeat 1 352 0 416 247 7 0 chr17 82028518 82028672 -3409808 + (TGGA)n Simple_repeat Simple_repeat 4 158 0 270 330 11 0 chr17 82028680 82028771 -3409709 + MLT1H1 LTR MaLR 95 186 -369 277 239 0 28 chr17 82028780 82028851 -3409629 - MLT1H1 LTR MaLR -486 69 1 2149 112 0 13 chr17 82030364 82030678 -3407802 - AluSx SINE Alu 0 312 3 261 376 64 0 chr17 82030824 82030949 -3407531 - MIR3 SINE MIR -41 167 35 449 338 14 0 chr17 82031243 82031391 -3407089 - L2 LINE L2 0 3272 3123 190 291 0 0 chr17 82031428 82031483 -3406997 - L2 LINE L2 -229 3043 2989 238 380 72 31 chr17 82031681 82031999 -3406481 - L3 LINE CR1 -80 1497 1167 214 186 23 0 chr17 82032435 82032478 -3406002 + CT-rich Low_complexity Low_complexity 4 47 0 251 373 71 0 chr17 82033061 82033230 -3405250 - MIR3 SINE MIR -4 204 24 457 204 13 0 chr17 82034349 82034501 -3403979 + (CA)n Simple_repeat Simple_repeat 1 154 0 810 192 2 0 chr17 82034523 82034933 -3403547 + (CA)n Simple_repeat Simple_repeat 1 411 0 752 320 43 24 chr17 82035336 82035705 -3402775 + L1M4 LINE L1 3576 3951 -2195 387 302 24 40 chr17 82035740 82036089 -3402391 - L1MC4 LINE L1 -1339 6703 6528 418 304 71 28 chr17 82036118 82036592 -3401888 - L1MC4 LINE L1 -1339 6703 6525 384 306 51 36 chr17 82036580 82036979 -3401501 - L1MC4 LINE L1 -1339 6703 6525 * 353 310 20 53 chr17 82036965 82037273 -3401207 - L1MC4 LINE L1 -1339 6703 6528 * 3782 147 36 3 chr17 82037287 82037926 -3400554 + L1MA4 LINE L1 5636 6295 -5 1694 297 107 11 chr17 82037951 82038671 -3399809 + L1ME3A LINE L1 5379 6167 -3 217 231 33 44 chr17 82039335 82039426 -3399054 - MER5A DNA MER1_type -56 133 44 254 217 58 0 chr17 82039579 82039648 -3398832 + MIR SINE MIR 63 135 -127 207 0 0 0 chr17 82041403 82041426 -3397054 + (TC)n Simple_repeat Simple_repeat 2 24 0 2254 104 3 0 chr17 82041426 82041734 -3396746 - AluSx SINE Alu -3 309 1 3520 199 37 29 chr17 82042081 82042325 -3396155 - L1MB5 LINE L1 0 6174 5933 1891 97 18 18 chr17 82042325 82042604 -3395876 + AluSx SINE Alu 24 302 -10 3520 199 37 29 chr17 82042604 82043219 -3395261 - L1MB5 LINE L1 -241 5933 5308 2211 100 7 3 chr17 82043229 82043528 -3394952 - AluSx SINE Alu -12 300 1 477 303 11 40 chr17 82043532 82043608 -3394872 + MIR SINE MIR 93 170 -92 582 223 9 0 chr17 82043608 82043720 -3394760 - MER81 DNA DNA -1 113 1 477 303 11 40 chr17 82043720 82043818 -3394662 + MIR SINE MIR 170 262 0 186 244 0 0 chr17 82044010 82044051 -3394429 - MIR SINE MIR -2 260 220 317 193 72 48 chr17 82044865 82044948 -3393532 + MIR SINE MIR 19 103 -105 2088 131 0 7 chr17 82045233 82045539 -3392941 - AluSx SINE Alu -8 304 1 634 314 5 0 chr17 82045541 82045732 -3392748 + L3 LINE CR1 1285 1476 -101 2102 228 66 31 chr17 82045739 82046292 -3392188 + MLT1E LTR MaLR 1 528 -27 191 233 83 17 chr17 82046334 82046394 -3392086 + L3 LINE CR1 1487 1550 -27 295 261 102 33 chr17 82046556 82046718 -3391762 + MIR SINE MIR 23 198 -64 544 355 14 9 chr17 82047035 82047246 -3391234 - L2 LINE L2 -17 3296 3085 761 266 68 10 chr17 82047265 82047472 -3391008 + MER58A DNA MER1_type 6 224 0 389 244 309 5 chr17 82047472 82047884 -3390596 - L2 LINE L2 -245 3068 2501 374 253 41 65 chr17 82049249 82049273 -3389207 - L1MB8 LINE L1 -7 6171 6148 1972 165 15 85 chr17 82049273 82049566 -3388914 + MLT1B LTR MaLR 4 261 -129 1866 145 27 0 chr17 82049566 82049863 -3388617 + AluJb SINE Alu 1 305 -7 1972 165 15 85 chr17 82049863 82049981 -3388499 + MLT1B LTR MaLR 261 386 -4 374 253 41 65 chr17 82049981 82050126 -3388354 - L1MB8 LINE L1 -30 6148 6006 313 107 36 18 chr17 82050127 82050183 -3388297 + MSTD LTR MaLR 2 58 -338 207 0 0 0 chr17 82050227 82050250 -3388230 + (CAG)n Simple_repeat Simple_repeat 1 23 0 919 100 23 0 chr17 82050373 82050503 -3387977 - AluSq/x SINE Alu -180 133 1 24 32 0 0 chr17 82050740 82050771 -3387709 + AT_rich Low_complexity Low_complexity 1 31 0 2119 109 0 3 chr17 82050771 82051064 -3387416 + AluSg SINE Alu 2 293 -17 1680 181 7 0 chr17 82051064 82051352 -3387128 - AluJo SINE Alu -20 292 3 1103 226 72 41 chr17 82051353 82051716 -3386764 - LTR37A LTR ERV1 -7 419 46 246 341 177 18 chr17 82053023 82053187 -3385293 - L3 LINE CR1 -77 1500 1311 1032 233 118 45 chr17 82053188 82053518 -3384962 + MLT1A1 LTR MaLR 11 364 -1 2294 102 0 0 chr17 82053539 82053842 -3384638 - AluSg SINE Alu -7 303 1 286 306 142 73 chr17 82053872 82054050 -3384430 - L3 LINE CR1 -307 1270 1106 3405 117 50 4 chr17 82054050 82054554 -3383926 - MER1A DNA MER1_type 0 527 1 286 306 142 73 chr17 82054554 82054644 -3383836 - L3 LINE CR1 -471 1106 1024 2561 171 76 12 chr17 82054644 82055128 -3383352 - MLT2B2 LTR ERVL 0 515 1 286 306 142 73 chr17 82055128 82055175 -3383305 - L3 LINE CR1 -553 1024 932 1251 238 129 27 chr17 82055372 82055783 -3382697 - LTR16C LTR ERVL -3 488 36 919 145 7 13 chr17 82057317 82057469 -3381011 + FAM SINE Alu 5 155 -30 184 194 65 0 chr17 82057516 82057578 -3380902 + (CATG)n Simple_repeat Simple_repeat 4 69 0 448 261 6 6 chr17 82057614 82057794 -3380686 + (CA)n Simple_repeat Simple_repeat 1 180 0 376 283 6 6 chr17 82057825 82058005 -3380475 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 261 0 22 chr17 82058036 82058220 -3380260 + (CA)n Simple_repeat Simple_repeat 1 180 0 433 253 11 0 chr17 82058239 82058417 -3380063 + (CA)n Simple_repeat Simple_repeat 1 180 0 288 0 0 0 chr17 82060455 82060487 -3377993 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 226 208 21 0 chr17 82060491 82060539 -3377941 - L2 LINE L2 -13 3259 3211 476 214 45 0 chr17 82061919 82062031 -3376449 - MIR SINE MIR -115 147 31 308 358 77 33 chr17 82062547 82062821 -3375659 + L2 LINE L2 2946 3231 -41 2000 124 0 0 chr17 82063406 82063696 -3374784 - AluSx SINE Alu -22 290 1 181 277 0 0 chr17 82063820 82063867 -3374613 - MIR SINE MIR -63 145 99 228 277 0 0 chr17 82064262 82064327 -3374153 + (TG)n Simple_repeat Simple_repeat 1 65 0 558 239 61 44 chr17 82064551 82064731 -3373749 + MLT1G LTR MaLR 408 590 0 1967 143 0 6 chr17 82065022 82065336 -3373144 - AluJb SINE Alu 0 312 1 241 331 52 15 chr17 82065491 82065627 -3372853 + MLT1I LTR MaLR 57 197 -212 667 273 82 55 chr17 82065885 82066504 -3371976 - L1MEc LINE L1 -4134 2262 1627 23 68 0 0 chr17 82066685 82066729 -3371751 + AT_rich Low_complexity Low_complexity 1 44 0 1144 219 97 122 chr17 82066959 82067390 -3371090 - L1ME3A LINE L1 -5 6165 5748 2146 105 6 10 chr17 82067390 82067703 -3370777 - AluSx SINE Alu 0 312 1 1144 219 97 122 chr17 82067703 82067806 -3370674 - L1ME3A LINE L1 -422 5748 5644 451 316 84 9 chr17 82067809 82068032 -3370448 - L1MEc LINE L1 -4760 1636 1378 441 0 0 0 chr17 82068032 82068081 -3370399 + (TG)n Simple_repeat Simple_repeat 2 50 0 451 316 84 9 chr17 82068081 82068192 -3370288 - L1MEc LINE L1 -5018 1378 1277 387 318 131 0 chr17 82268368 82268544 -3169936 - L1ME LINE L1 -590 5572 5374 485 316 224 41 chr17 82268546 82268810 -3169670 - L1ME LINE L1 -867 5279 4946 2360 81 10 0 chr17 82268810 82269118 -3169362 - AluY SINE Alu 0 311 1 485 316 224 41 chr17 82269118 82269170 -3169310 - L1ME LINE L1 -1200 4946 4905 180 357 9 36 chr17 82269257 82269369 -3169111 - MER5B DNA MER1_type -66 112 4 1237 112 0 0 chr17 82270876 82271037 -3167443 - AluSg/x SINE Alu -18 294 134 2306 72 0 10 chr17 82271037 82271343 -3167137 - AluY SINE Alu -8 303 1 1774 178 71 2 chr17 82271344 82271738 -3166742 - L1MB3 LINE L1 -42 6141 5721 212 262 167 0 chr17 82272107 82272215 -3166265 + MIR SINE MIR 1 125 -83 1577 148 21 100 chr17 82272411 82272750 -3165730 + AluYb8 SINE Alu 1 312 -6 186 355 13 13 chr17 82272960 82273036 -3165444 - MIR SINE MIR -111 151 76 2041 148 33 44 chr17 82273135 82273300 -3165180 - THE1B LTR MaLR -2 362 197 2116 120 19 3 chr17 82273300 82273608 -3164872 + AluSq SINE Alu 1 313 0 2041 148 33 44 chr17 82273608 82273808 -3164672 - THE1B LTR MaLR -167 197 1 226 250 23 80 chr17 82276177 82276265 -3162215 + MLT1C LTR MaLR 1 83 -384 863 275 28 34 chr17 82276741 82277065 -3161415 + MLT1C LTR MaLR 49 370 -97 217 309 53 21 chr17 82277113 82277207 -3161273 + L2 LINE L2 3171 3267 -5 230 243 71 0 chr17 82277370 82277440 -3161040 + L1MC4 LINE L1 7967 8041 -1 753 220 38 93 chr17 82278026 82278262 -3160218 + MER58A DNA MER1_type 2 224 0 966 148 15 8 chr17 82281331 82281595 -3156885 + GA-rich Low_complexity Low_complexity 1 266 0 306 214 14 0 chr17 82281600 82281670 -3156810 - MER58A DNA MER1_type -36 71 1 332 305 7 57 chr17 82281677 82281818 -3156662 + L2 LINE L2 2642 2775 -539 241 239 0 0 chr17 82281821 82281867 -3156613 + polypurine Low_complexity Low_complexity 2 47 0 2133 122 0 0 chr17 82282072 82282366 -3156114 + AluSx SINE Alu 1 294 -18 606 179 13 26 chr17 82282935 82283166 -3155314 + CT-rich Low_complexity Low_complexity 1 228 0 227 235 59 82 chr17 82283405 82283490 -3154990 - L2 LINE L2 -2 3270 3188 320 236 53 64 chr17 82283586 82283745 -3154735 - MLT1J2 LTR MaLR -11 428 251 282 301 146 0 chr17 82283833 82283956 -3154524 - MLT1J2 LTR MaLR -290 160 20 254 246 51 63 chr17 82284062 82284237 -3154243 - L2 LINE L2 -274 2998 2826 363 274 32 64 chr17 82284353 82284572 -3153908 - L1ME3A LINE L1 0 6170 5959 2017 147 0 0 chr17 82284580 82284887 -3153593 + AluSx SINE Alu 2 308 -4 4444 110 36 2 chr17 82284888 82285816 -3152664 + L1PA11 LINE L1 5050 6009 -165 742 227 132 22 chr17 82287623 82288046 -3150434 + MER77 LTR ERV1 59 587 -18 266 297 123 0 chr17 82288057 82288195 -3150285 - MIR3 SINE MIR -39 169 15 329 289 116 0 chr17 82288901 82289022 -3149458 - MER45A DNA AcHobo 0 178 44 561 208 0 0 chr17 82289204 82289382 -3149098 + (CA)n Simple_repeat Simple_repeat 1 178 0 405 240 0 0 chr17 82289400 82289575 -3148905 + (CA)n Simple_repeat Simple_repeat 1 175 0 327 274 0 0 chr17 82289595 82289770 -3148710 + (CA)n Simple_repeat Simple_repeat 1 175 0 788 200 25 25 chr17 82290289 82290489 -3147991 + MER20 DNA MER1_type 5 204 -15 357 330 0 0 chr17 82291498 82291598 -3146882 - MIR3 SINE MIR -9 199 100 255 321 62 37 chr17 82291831 82291993 -3146487 + L2 LINE L2 3104 3269 -3 1470 168 35 54 chr17 82292276 82292645 -3145835 - L1MB3 LINE L1 -1 6182 5821 2360 94 0 0 chr17 82292648 82292957 -3145523 - AluSx SINE Alu -3 309 1 261 261 0 0 chr17 82293785 82293900 -3144580 + (TG)n Simple_repeat Simple_repeat 2 116 0 255 326 0 0 chr17 82294003 82294089 -3144391 + C-rich Low_complexity Low_complexity 4 89 0 798 170 0 37 chr17 82295378 82295513 -3142967 - FLAM_A SINE Alu -3 130 1 382 306 204 25 chr17 82295728 82296003 -3142477 - L2 LINE L2 0 3313 2990 2660 145 42 2 chr17 82296132 82296540 -3141940 + MSTB LTR MaLR 1 424 -2 1786 210 100 10 chr17 82296768 82297259 -3141221 - MLT1F LTR MaLR -7 535 1 2030 134 20 7 chr17 82297406 82297705 -3140775 - AluSx SINE Alu -9 303 1 278 341 157 18 chr17 82298008 82298225 -3140255 + L2 LINE L2 2608 2854 -460 267 114 0 0 chr17 82298300 82298344 -3140136 + (TCCCC)n Simple_repeat Simple_repeat 4 47 0 2101 138 3 0 chr17 82298659 82298970 -3139510 - AluSx SINE Alu 0 312 1 1293 247 70 19 chr17 82298974 82299403 -3139077 - L1MB3 LINE L1 0 6183 5733 250 113 16 16 chr17 82300025 82300087 -3138393 + (TC)n Simple_repeat Simple_repeat 2 63 0 250 293 50 0 chr17 82301678 82301777 -3136703 + MIR SINE MIR 127 230 -32 265 213 200 0 chr17 82302083 82302163 -3136317 - MLT1K LTR MaLR -346 242 147 569 301 22 27 chr17 82302387 82302570 -3135910 - MIR SINE MIR -80 182 1 221 339 0 46 chr17 82305018 82305127 -3133353 - MIR3 SINE MIR -23 185 82 185 333 158 8 chr17 82305380 82305500 -3132980 + MER5B DNA MER1_type 29 166 -12 308 343 58 0 chr17 82305844 82305981 -3132499 - MER5B DNA MER1_type -29 149 5 215 314 143 0 chr17 82308443 82308548 -3129932 - L3 LINE CR1 -11 1566 1447 401 312 71 29 chr17 82308920 82309126 -3129354 + MIR SINE MIR 35 246 -16 756 240 140 4 chr17 82309337 82309616 -3128864 - LTR16C LTR ERVL 0 491 175 1834 217 83 31 chr17 82310080 82310559 -3127921 + MLT1D LTR MaLR 1 504 -1 754 293 27 15 chr17 82311280 82311543 -3126937 + MER33 DNA MER1_type 1 266 -58 1663 191 37 3 chr17 82311644 82311968 -3126512 - L1MB3 LINE L1 -4 6179 5845 425 258 66 50 chr17 82311989 82312187 -3126293 - MIR SINE MIR -46 216 16 309 188 188 69 chr17 82313563 82313627 -3124853 - MLT1H LTR MaLR 0 549 494 2344 85 3 3 chr17 82313627 82313934 -3124546 + AluSp SINE Alu 1 307 -6 309 188 188 69 chr17 82313934 82314013 -3124467 - MLT1H LTR MaLR -55 494 389 640 260 47 16 chr17 82314117 82314309 -3124171 - MLT1H LTR MaLR -319 230 33 603 338 56 17 chr17 82314370 82314604 -3123876 - MIR SINE MIR -1 261 19 784 182 15 0 chr17 82314694 82314963 -3123517 + (TGGA)n Simple_repeat Simple_repeat 1 273 0 646 213 0 22 chr17 82314986 82315169 -3123311 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 764 213 0 10 chr17 82315194 82315816 -3122664 + (TGGA)n Simple_repeat Simple_repeat 1 615 0 450 257 29 21 chr17 82316876 82317016 -3121464 - L1ME2 LINE L1 -6 6158 6018 231 333 28 50 chr17 82317307 82317448 -3121032 - L2 LINE L2 -91 3181 3044 187 324 63 27 chr17 82317477 82317588 -3120892 - L3b LINE CR1 -180 1403 1289 729 153 0 0 chr17 82318689 82318865 -3119615 + CT-rich Low_complexity Low_complexity 3 178 0 395 315 8 15 chr17 82319035 82319165 -3119315 + L2 LINE L2 3144 3272 0 205 197 33 49 chr17 82322430 82322491 -3115989 + GA-rich Low_complexity Low_complexity 3 62 0 340 202 48 12 chr17 82322894 82322978 -3115502 + L2 LINE L2 3224 3310 -3 2111 87 0 4 chr17 82323038 82323313 -3115167 + AluY SINE Alu 27 300 -11 206 268 186 0 chr17 82323924 82324021 -3114459 + MIR SINE MIR 20 134 -74 180 382 0 0 chr17 82324032 82324108 -3114372 - L2 LINE L2 -27 3286 3211 252 59 0 0 chr17 82324384 82324418 -3114062 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 204 40 0 0 chr17 82324622 82324647 -3113833 + (A)n Simple_repeat Simple_repeat 1 25 0 2058 141 0 0 chr17 82324672 82324976 -3113504 - AluJb SINE Alu -8 304 1 225 0 0 0 chr17 82326102 82326127 -3112353 + (GA)n Simple_repeat Simple_repeat 2 26 0 283 364 62 0 chr17 82326156 82326285 -3112195 + L2 LINE L2 3177 3313 0 494 62 0 38 chr17 82326407 82326487 -3111993 + (GGGGA)n Simple_repeat Simple_repeat 1 77 0 228 330 43 21 chr17 82326704 82326798 -3111682 - L2 LINE L2 -484 2830 2735 209 367 155 5 chr17 82326805 82327012 -3111468 - L2 LINE L2 -2189 1125 888 464 225 121 22 chr17 82327911 82328093 -3110387 - MER21B LTR ERV1 -152 711 512 822 277 119 29 chr17 82328901 82329576 -3108904 - L2 LINE L2 -2 3311 2563 402 250 0 0 chr17 82330497 82330617 -3107863 + (CCA)n Simple_repeat Simple_repeat 1 120 0 338 319 143 42 chr17 82330619 82331306 -3107174 + L1M2 LINE L1 487 1242 -5607 204 182 0 0 chr17 82331306 82331350 -3107130 + (CCA)n Simple_repeat Simple_repeat 1 44 0 188 326 142 14 chr17 82332051 82332336 -3106144 + L2 LINE L2 2704 3021 -251 237 229 0 0 chr17 82333290 82333338 -3105142 + (TGG)n Simple_repeat Simple_repeat 1 48 0 774 202 208 11 chr17 82333618 82333801 -3104679 - MER20 DNA MER1_type 0 219 1 572 286 52 42 chr17 82333828 82334041 -3104439 - MIR SINE MIR -8 254 40 486 351 18 6 chr17 82334061 82334229 -3104251 - L2 LINE L2 -1 3312 3143 1494 213 58 42 chr17 82334233 82334684 -3103796 - MLT1C LTR MaLR -4 463 6 230 291 48 0 chr17 82335320 82335423 -3103057 - MER5A DNA MER1_type -76 113 6 2133 102 3 0 chr17 82335528 82335847 -3102633 + AluSq SINE Alu 1 320 0 242 246 42 0 chr17 82335962 82336029 -3102451 + MIR SINE MIR 101 170 -62 201 367 67 8 chr17 82336879 82336999 -3101481 - MIR SINE MIR -31 231 105 1208 246 84 21 chr17 82338590 82339016 -3099464 - MLT1C LTR MaLR -8 459 7 195 129 0 0 chr17 82340499 82340530 -3097950 + (TG)n Simple_repeat Simple_repeat 1 31 0 287 105 65 55 chr17 82341108 82341203 -3097277 + MIR SINE MIR 45 145 -63 691 189 16 63 chr17 82341735 82341926 -3096554 - MER66B LTR ERV1 0 486 305 1726 161 17 42 chr17 82341935 82342289 -3096191 - MER66B LTR ERV1 -141 345 1 908 219 48 5 chr17 82342626 82342836 -3095644 - MER20 DNA MER1_type 0 219 1 1395 236 89 16 chr17 82343458 82343907 -3094573 + L1MB7 LINE L1 5644 6125 -59 209 265 0 73 chr17 82344694 82344762 -3093718 + MIR SINE MIR 104 166 -96 2215 82 7 3 chr17 82345041 82345335 -3093145 + AluSx SINE Alu 5 299 -13 210 286 0 0 chr17 82345342 82345405 -3093075 + (TG)n Simple_repeat Simple_repeat 1 63 0 322 269 0 14 chr17 82347392 82347407 -3091073 + CT-rich Low_complexity Low_complexity 2 16 -128 2364 68 0 0 chr17 82347407 82347700 -3090780 - AluY SINE Alu -14 297 5 2212 74 3 39 chr17 82347704 82348013 -3090467 - AluSx SINE Alu 0 312 15 322 269 0 14 chr17 82348013 82348137 -3090343 + CT-rich Low_complexity Low_complexity 19 144 0 557 238 77 60 chr17 82348993 82349228 -3089252 - MLT1B LTR MaLR -16 451 213 209 283 0 0 chr17 82349272 82349318 -3089162 + (TG)n Simple_repeat Simple_repeat 1 46 0 669 200 103 17 chr17 82349318 82349493 -3088987 - MLT1B LTR MaLR -195 195 6 234 62 0 0 chr17 82351120 82351152 -3087328 + (TG)n Simple_repeat Simple_repeat 1 32 0 466 279 39 0 chr17 82351721 82351850 -3086630 + MER5C DNA MER1_type 5 138 -186 1616 203 69 11 chr17 82351992 82352356 -3086124 - MLT1B LTR MaLR -5 385 1 382 130 14 0 chr17 82352356 82352425 -3086055 + L1MD3 LINE L1 7910 7979 -16 299 235 0 17 chr17 82355590 82355705 -3082775 + (TCTA)n Simple_repeat Simple_repeat 2 114 0 543 226 24 0 chr17 82355708 82355876 -3082604 + (TCCA)n Simple_repeat Simple_repeat 2 173 0 571 237 11 0 chr17 82355904 82356081 -3082399 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 291 114 0 0 chr17 82356084 82356128 -3082352 + (TCCA)n Simple_repeat Simple_repeat 2 45 0 452 249 32 0 chr17 82356130 82356417 -3082063 + (TCTA)n Simple_repeat Simple_repeat 1 296 0 3689 201 31 6 chr17 82358320 82359050 -3079430 + L1MB3 LINE L1 5435 6183 0 239 357 61 0 chr17 82360365 82360463 -3078017 + MIR SINE MIR 62 150 -58 2056 108 3 3 chr17 82360649 82360930 -3077550 + AluSx SINE Alu 1 282 -25 429 20 0 0 chr17 82360930 82360980 -3077500 + (CA)n Simple_repeat Simple_repeat 1 50 0 505 286 114 23 chr17 82361546 82361808 -3076672 + MER77 LTR ERV1 54 339 -266 395 321 53 34 chr17 82361878 82362140 -3076340 + MER77 LTR ERV1 332 598 -7 200 258 0 62 chr17 82362844 82362941 -3075539 + G-rich Low_complexity Low_complexity 2 92 0 521 238 81 12 chr17 82363521 82363681 -3074799 + MLT1B LTR MaLR 1 171 -219 189 196 0 0 chr17 82363699 82363750 -3074730 + CT-rich Low_complexity Low_complexity 1 51 0 696 331 138 13 chr17 82363851 82364316 -3074164 + L2 LINE L2 2202 2724 -590 259 340 49 46 chr17 82364661 82364985 -3073495 + L2 LINE L2 2895 3219 -53 2118 148 140 11 chr17 82365176 82365555 -3072925 + MSTA LTR MaLR 1 428 0 1395 267 74 25 chr17 82365642 82366087 -3072393 + MLT1C LTR MaLR 1 467 0 279 54 0 0 chr17 82366984 82367021 -3071459 + (CA)n Simple_repeat Simple_repeat 1 37 0 409 184 11 11 chr17 82367945 82368032 -3070448 + Tigger5 DNA MER2_type 2237 2323 0 432 362 0 7 chr17 82369032 82369184 -3069296 + MIR SINE MIR 41 191 -71 473 340 13 13 chr17 82370300 82370459 -3068021 + MIR SINE MIR 39 197 -65 299 260 50 40 chr17 82372029 82372129 -3066351 - MIR SINE MIR -78 130 30 183 186 0 0 chr17 82372953 82372996 -3065484 + (CA)n Simple_repeat Simple_repeat 1 43 0 348 261 19 13 chr17 82373013 82373170 -3065310 + (CA)n Simple_repeat Simple_repeat 1 158 0 564 215 93 12 chr17 82373689 82373861 -3064619 - MER20 DNA MER1_type -17 202 17 220 322 139 0 chr17 82373864 82373979 -3064501 + L2 LINE L2 2585 2715 -599 637 238 49 98 chr17 82375633 82375940 -3062540 - L1MD2 LINE L1 -16 6343 6052 23 0 0 0 chr17 82375955 82375978 -3062502 + AT_rich Low_complexity Low_complexity 1 23 0 374 294 5 0 chr17 82377970 82378195 -3060285 + (TG)n Simple_repeat Simple_repeat 1 226 0 376 275 40 34 chr17 82380454 82380603 -3057877 - MIR SINE MIR -7 255 106 262 224 0 0 chr17 82381676 82381734 -3056746 - MLT1H LTR MaLR 0 549 492 2915 230 60 8 chr17 82381738 82382359 -3056121 - MER82 DNA MER2_type 0 653 1 261 0 0 0 chr17 82382389 82382418 -3056062 + (GGCTG)n Simple_repeat Simple_repeat 4 32 0 307 239 37 18 chr17 82382592 82382701 -3055779 - MLT1H LTR MaLR -381 168 58 2176 206 29 6 chr17 82383765 82384275 -3054205 + L1MB3 LINE L1 5623 6144 -39 2292 88 3 0 chr17 82384309 82384606 -3053874 + AluSx SINE Alu 1 298 -14 1048 130 0 41 chr17 82384606 82384775 -3053705 + AluSq SINE Alu 134 295 -18 489 245 0 0 chr17 82384775 82384881 -3053599 - MER82 DNA MER2_type -527 126 21 2136 105 7 0 chr17 82385249 82385544 -3052936 + AluSx SINE Alu 1 297 -15 351 0 0 0 chr17 82385785 82385824 -3052656 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 306 303 49 16 chr17 82386287 82386409 -3052071 + MIR SINE MIR 28 153 -109 402 200 0 0 chr17 82387200 82387280 -3051200 + L1MB3 LINE L1 5901 5980 -203 312 346 10 0 chr17 82388223 82388327 -3050153 + (TG)n Simple_repeat Simple_repeat 1 105 0 2301 112 0 0 chr17 82388869 82389181 -3049299 - AluSx SINE Alu 0 312 1 890 128 0 0 chr17 82389858 82389983 -3048497 + AluSq/x SINE Alu 1 125 -188 216 147 0 0 chr17 82390084 82390118 -3048362 + MIR SINE MIR 115 148 -114 1204 256 72 21 chr17 82390137 82390566 -3047914 - MLT1C LTR MaLR -8 459 9 722 268 24 19 chr17 82390715 82390928 -3047552 - MER20 DNA MER1_type -5 214 1 2070 94 0 42 chr17 82391896 82392204 -3046276 - AluSc SINE Alu -14 295 1 573 247 143 0 chr17 82392502 82392656 -3045824 + MER45A DNA AcHobo 3 178 0 419 287 115 0 chr17 82393626 82393800 -3044680 + MIR SINE MIR 47 240 -22 345 213 36 0 chr17 82396296 82396390 -3042090 - L1MA4A LINE L1 0 6274 6060 836 282 103 26 chr17 82396555 82396935 -3041545 - MLT1I LTR MaLR 0 409 1 422 273 45 9 chr17 82397037 82397147 -3041333 - MIR SINE MIR -148 114 1 271 229 140 63 chr17 82397249 82397351 -3041129 - MIR SINE MIR -62 146 51 221 313 42 31 chr17 82397500 82397596 -3040884 - MIR3 SINE MIR -29 179 83 246 341 0 24 chr17 82397692 82397777 -3040703 + (CACG)n Simple_repeat Simple_repeat 1 83 0 400 357 32 0 chr17 82397923 82398077 -3040403 - MIR SINE MIR -84 178 20 200 336 118 32 chr17 82398139 82398359 -3040121 - L2 LINE L2 -513 2801 2563 1945 100 4 0 chr17 82398666 82398926 -3039554 + AluSq SINE Alu 39 299 -14 384 333 16 0 chr17 82399644 82399770 -3038710 + MER5A DNA MER1_type 1 128 -61 317 258 11 11 chr17 82399848 82399941 -3038539 + MER63 DNA MER1_type 17 735 -327 231 290 0 0 chr17 82401239 82401339 -3037141 + (CA)n Simple_repeat Simple_repeat 2 101 0 306 297 0 0 chr17 82401388 82401533 -3036947 + (CA)n Simple_repeat Simple_repeat 1 145 0 347 276 104 8 chr17 82402861 82402995 -3035485 + MIR SINE MIR 1 147 -115 387 0 0 0 chr17 82406330 82406373 -3032107 + (TG)n Simple_repeat Simple_repeat 2 44 0 1015 276 49 0 chr17 82407893 82408119 -3030361 + MER33 DNA MER1_type 2 248 -2337 2206 121 0 3 chr17 82408119 82408425 -3030055 - AluSc SINE Alu -4 305 1 1015 276 49 0 chr17 82408425 82408506 -3029974 + MER33 DNA MER1_type 248 324 0 702 213 122 0 chr17 82411297 82411485 -3026995 + ORSL DNA AcHobo 4 214 -61 192 273 0 0 chr17 82411927 82412015 -3026465 + (TG)n Simple_repeat Simple_repeat 2 89 0 345 322 6 11 chr17 82412043 82412220 -3026260 + (TG)n Simple_repeat Simple_repeat 2 177 0 823 296 5 0 chr17 82413364 82413570 -3024910 - MIR SINE MIR -11 251 45 378 0 0 0 chr17 82414003 82414045 -3024435 + (TG)n Simple_repeat Simple_repeat 2 43 0 2192 92 3 16 chr17 82415241 82415557 -3022923 + AluSq SINE Alu 1 312 -1 214 234 62 0 chr17 82416038 82416102 -3022378 + MIR SINE MIR 81 148 -60 248 232 0 0 chr17 82418545 82418601 -3019879 + (TG)n Simple_repeat Simple_repeat 1 56 0 468 326 0 6 chr17 82418630 82418989 -3019491 + (TG)n Simple_repeat Simple_repeat 1 356 0 310 233 14 9 chr17 82420475 82420628 -3017852 + ORSL DNA AcHobo 42 225 -50 728 162 17 12 chr17 82422021 82422194 -3016286 + GA-rich Low_complexity Low_complexity 1 174 0 568 269 187 8 chr17 82422235 82422611 -3015869 - LTR16A LTR ERVL -6 444 3 218 195 0 0 chr17 82424237 82424278 -3014202 + (TG)n Simple_repeat Simple_repeat 1 41 0 188 298 8 81 chr17 82424863 82424987 -3013493 - L2 LINE L2 -7 3265 3151 215 261 244 11 chr17 82425346 82425522 -3012958 - L2 LINE L2 -261 3052 2836 235 298 108 81 chr17 82425581 82425990 -3012490 - L2 LINE L2 -652 2662 2243 1232 90 0 0 chr17 82428366 82428548 -3009932 + AluSg/x SINE Alu 129 310 0 314 291 137 17 chr17 82428694 82428811 -3009669 - L1 LINE L1 -2875 3271 3141 239 0 0 31 chr17 82428830 82428862 -3009618 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1645 169 29 0 chr17 82428862 82429134 -3009346 - AluJo SINE Alu -32 280 1 2179 132 0 0 chr17 82429340 82429651 -3008829 - AluSx SINE Alu -1 311 1 982 179 11 0 chr17 82430136 82430320 -3008160 + MER53 DNA DNA 1 186 -3 2000 134 7 0 chr17 82430624 82430916 -3007564 - AluJo SINE Alu -18 294 1 186 191 0 0 chr17 82434420 82434462 -3004018 + (CAGA)n Simple_repeat Simple_repeat 1 42 0 376 194 44 6 chr17 82436137 82436297 -3002183 + (CA)n Simple_repeat Simple_repeat 1 166 0 395 230 34 14 chr17 82436338 82436640 -3001840 + (CA)n Simple_repeat Simple_repeat 1 308 0 378 228 30 19 chr17 82436651 82437137 -3001343 + (CA)n Simple_repeat Simple_repeat 1 491 0 182 229 0 0 chr17 82437210 82437245 -3001235 - L2 LINE L2 -1 3271 3237 270 278 105 91 chr17 82437325 82437678 -3000802 - L2 LINE L2 -25 3247 2890 346 300 15 0 chr17 82437935 82438068 -3000412 - MIR SINE MIR -64 144 30 659 214 82 93 chr17 82438391 82438671 -2999809 - MLT1E3 LTR MaLR -309 315 39 2506 250 26 23 chr17 82439514 82440203 -2998277 + L1MB5 LINE L1 5476 6166 -8 422 352 13 0 chr17 82440867 82441026 -2997454 - MIR SINE MIR -79 183 23 2155 108 7 0 chr17 82441728 82442025 -2996455 + AluSq SINE Alu 1 299 -14 1020 283 70 26 chr17 82442880 82443285 -2995195 + L1ME2 LINE L1 5689 6118 -46 1825 138 76 0 chr17 82443285 82443575 -2994905 - AluSx SINE Alu 0 312 1 1020 283 70 26 chr17 82443575 82443625 -2994855 + L1ME2 LINE L1 6118 6164 0 309 233 48 48 chr17 82443627 82443730 -2994750 + L1MC4 LINE L1 7800 7902 -140 2374 76 16 0 chr17 82444959 82445263 -2993217 + AluY SINE Alu 1 309 -2 321 364 104 0 chr17 82446085 82446305 -2992175 - MIR SINE MIR -14 248 6 358 254 69 8 chr17 82447072 82447202 -2991278 - MLT1C LTR MaLR -1 466 329 1060 249 94 25 chr17 82448461 82448866 -2989614 + MLT1C LTR MaLR 1 433 -34 2079 138 0 0 chr17 82450257 82450553 -2987927 + AluSx SINE Alu 1 296 -16 1154 228 19 19 chr17 82451833 82452149 -2986331 + L1MC1 LINE L1 6017 6332 -1 238 178 0 0 chr17 82452891 82452936 -2985544 + L1M3 LINE L1 5664 5708 -472 2325 124 114 8 chr17 82453628 82454015 -2984465 - MSTA LTR MaLR 0 428 1 1897 225 39 81 chr17 82454257 82454637 -2983843 + L1MB5 LINE L1 5095 5490 -684 519 139 128 0 chr17 82454637 82454723 -2983757 + AluSg/x SINE Alu 197 293 -16 1897 225 39 81 chr17 82454723 82455228 -2983252 + L1MB5 LINE L1 5490 6009 -165 429 211 22 0 chr17 82455569 82455659 -2982821 + MER81 DNA DNA 23 114 0 385 302 94 31 chr17 82455722 82455977 -2982503 - LTR33A LTR ERVL 0 523 253 218 222 0 42 chr17 82456644 82456716 -2981764 + GA-rich Low_complexity Low_complexity 6 74 0 359 314 96 45 chr17 82456939 82457251 -2981229 - L2 LINE L2 -657 2657 2330 2165 99 16 0 chr17 82457262 82457565 -2980915 + AluSq SINE Alu 1 308 -5 688 377 58 41 chr17 82458244 82458835 -2979645 + L1ME LINE L1 811 1411 -4985 334 327 19 24 chr17 82458838 82459049 -2979431 + HAL1b LINE L1 331 540 -808 508 303 111 45 chr17 82459066 82459915 -2978565 + L1ME LINE L1 4199 5170 -1063 1970 116 22 7 chr17 82459915 82460228 -2978252 + AluSx SINE Alu 1 317 0 508 303 111 45 chr17 82460228 82460730 -2977750 + L1ME LINE L1 5170 5638 -595 * 624 268 40 18 chr17 82460727 82460951 -2977529 + L1M4 LINE L1 3206 3434 -2712 485 330 107 40 chr17 82460987 82461282 -2977198 - L2 LINE L2 -1155 2159 1816 2044 124 0 3 chr17 82461282 82461606 -2976874 + AluSx SINE Alu 1 323 0 485 330 107 40 chr17 82461606 82461783 -2976697 - L2 LINE L2 -1498 1816 1652 362 306 139 3 chr17 82462221 82462445 -2976035 + MIR SINE MIR 14 254 -8 1961 118 31 10 chr17 82462582 82462894 -2975586 - AluSx SINE Alu 0 312 1 354 80 0 0 chr17 82463134 82463184 -2975296 + (TC)n Simple_repeat Simple_repeat 1 50 0 312 376 6 6 chr17 82464818 82464996 -2973484 + (CATG)n Simple_repeat Simple_repeat 1 178 0 2419 90 0 0 chr17 82465810 82466121 -2972359 - AluSx SINE Alu -1 311 1 229 381 58 35 chr17 82466256 82466429 -2972051 - MIR3 SINE MIR -6 202 26 642 245 7 0 chr17 82466460 82466599 -2971881 + MER5A DNA MER1_type 8 147 -42 188 267 0 0 chr17 82466651 82466696 -2971784 - MER5A DNA MER1_type -113 76 32 1915 164 7 3 chr17 82466782 82467087 -2971393 + AluJo SINE Alu 2 307 -5 2215 108 0 0 chr17 82467898 82468195 -2970285 + AluSx SINE Alu 1 297 -15 2076 113 7 0 chr17 82468726 82469019 -2969461 - AluSx SINE Alu -17 295 1 302 56 0 37 chr17 82469413 82469467 -2969013 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2143 112 0 0 chr17 82469467 82469752 -2968728 - AluSx SINE Alu -27 285 1 180 300 0 0 chr17 82470367 82470407 -2968073 + MIR SINE MIR 118 157 -105 237 132 0 0 chr17 82470454 82470492 -2967988 + (CATATA)n Simple_repeat Simple_repeat 6 43 0 352 273 14 56 chr17 82470987 82471130 -2967350 - MIR SINE MIR -19 243 107 362 332 98 48 chr17 82472755 82473288 -2965192 - L1MEd LINE L1 -4929 1443 802 225 273 0 0 chr17 82475704 82475759 -2962721 + (CA)n Simple_repeat Simple_repeat 2 56 0 506 313 33 43 chr17 82477288 82477499 -2960981 - MER3 DNA MER1_type 0 209 1 306 253 111 10 chr17 82477725 82477824 -2960656 + L2 LINE L2 2965 3073 -199 2228 113 0 0 chr17 82477863 82478163 -2960317 + AluSg SINE Alu 1 300 -10 506 276 51 12 chr17 82478796 82478995 -2959485 + MIR3 SINE MIR 4 196 -33 205 328 0 30 chr17 82479271 82479338 -2959142 + MIR SINE MIR 90 154 -108 2122 120 3 0 chr17 82483852 82484151 -2954329 + AluSx SINE Alu 1 300 -12 380 292 82 46 chr17 82485174 82485369 -2953111 + L3b LINE CR1 1277 1478 -105 431 180 98 12 chr17 82485792 82486173 -2952307 + (CAGAC)n Simple_repeat Simple_repeat 1 413 0 393 170 98 7 chr17 82486203 82486356 -2952124 + (CAGAC)n Simple_repeat Simple_repeat 1 167 0 1206 68 0 6 chr17 82486820 82486976 -2951504 - L1PA4 LINE L1 0 6155 6000 2366 88 0 3 chr17 82486976 82487284 -2951196 - AluY SINE Alu -4 307 1 249 341 134 17 chr17 82487841 82488020 -2950460 + L3 LINE CR1 182 381 -1196 243 360 50 14 chr17 82488585 82488724 -2949756 + MIR SINE MIR 4 147 -115 267 359 9 0 chr17 82488824 82488930 -2949550 + (TG)n Simple_repeat Simple_repeat 2 108 0 578 195 37 53 chr17 82488961 82489151 -2949329 - MER53 DNA DNA 0 189 3 351 394 74 5 chr17 82491138 82491354 -2947126 - L1ME3 LINE L1 -255 5907 5677 209 250 0 0 chr17 82492428 82492472 -2946008 + (TGAG)n Simple_repeat Simple_repeat 1 44 0 314 329 8 17 chr17 82492776 82492900 -2945580 + MIR SINE MIR 28 151 -57 1286 202 9 132 chr17 82494201 82494252 -2944228 - MLT2C1 LTR ERVL -8 389 333 230 0 33 0 chr17 82494252 82494282 -2944198 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1286 202 9 132 chr17 82494282 82494402 -2944078 - MLT2C1 LTR ERVL -64 333 200 2230 115 0 0 chr17 82494402 82494706 -2943774 - AluSq SINE Alu -9 304 1 1286 202 9 132 chr17 82494706 82494974 -2943506 - MLT2C1 LTR ERVL -197 200 3 1433 168 44 21 chr17 82495899 82496237 -2942243 - THE1B LTR MaLR -16 412 1 1009 203 167 61 chr17 82496669 82496738 -2941742 - MLT1A1 LTR MaLR 0 365 305 1931 134 42 0 chr17 82496738 82497022 -2941458 - AluSx SINE Alu -16 296 1 1009 203 167 61 chr17 82497022 82497282 -2941198 - MLT1A1 LTR MaLR -60 305 1 183 358 0 0 chr17 82499648 82499715 -2938765 - MIR SINE MIR -169 93 27 444 325 85 25 chr17 82501208 82501646 -2936834 - L1MC4 LINE L1 -1 6708 5769 357 176 0 0 chr17 82501970 82502044 -2936436 + (CA)n Simple_repeat Simple_repeat 2 75 0 432 170 152 27 chr17 82502610 82502648 -2935832 - L1MB5 LINE L1 -6 6177 6145 1521 189 4 18 chr17 82502648 82502923 -2935557 - AluJb SINE Alu -27 285 15 432 170 152 27 chr17 82502923 82503033 -2935447 - L1MB5 LINE L1 -38 6145 6024 22 35 0 0 chr17 82503038 82503067 -2935413 + AT_rich Low_complexity Low_complexity 1 29 0 183 80 0 0 chr17 82503144 82503169 -2935311 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 2033 83 86 4 chr17 82503183 82503461 -2935019 - AluSq SINE Alu -12 301 1 472 297 48 52 chr17 82503490 82503719 -2934761 + MIR SINE MIR 35 262 0 1909 220 27 25 chr17 82503721 82504199 -2934281 - L1MB3 LINE L1 -2 6181 5703 1125 202 66 27 chr17 82505541 82505655 -2932825 - MLT1B LTR MaLR -1 466 358 2010 131 3 0 chr17 82505655 82505953 -2932527 + AluSx SINE Alu 1 299 -13 1125 202 66 27 chr17 82505953 82506202 -2932278 - MLT1B LTR MaLR -109 358 74 1008 280 99 3 chr17 82506202 82506516 -2931964 + MER2 DNA MER2_type 1 344 0 1125 202 66 27 chr17 82506516 82506592 -2931888 - MLT1B LTR MaLR -393 74 2 222 331 58 25 chr17 82507533 82507654 -2930826 + L2 LINE L2 3182 3306 -7 295 296 9 19 chr17 82508831 82508939 -2929541 + G-rich Low_complexity Low_complexity 2 108 0 2507 57 0 13 chr17 82509144 82509458 -2929022 + AluY SINE Alu 1 310 -1 482 335 49 29 chr17 82511229 82511578 -2926902 - LTR16C LTR ERVL 0 491 136 2386 346 65 36 chr17 82511892 82513653 -2924827 - ERVL LTR ERVL -2612 3152 1340 293 244 14 60 chr17 82514629 82514917 -2923563 + C-rich Low_complexity Low_complexity 1 274 0 449 226 70 32 chr17 82515162 82515348 -2923132 - LTR16C LTR ERVL 0 491 299 246 333 81 0 chr17 82515643 82515742 -2922738 + MIR SINE MIR 79 185 -77 240 35 0 0 chr17 82517142 82517171 -2921309 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2405 82 0 7 chr17 82518079 82518384 -2920096 - AluSx SINE Alu -9 303 1 225 255 0 0 chr17 82518387 82518434 -2920046 - MIR SINE MIR -113 149 103 284 262 131 0 chr17 82518523 82518630 -2919850 + MER3 DNA MER1_type 36 156 -53 2210 123 0 10 chr17 82519334 82519644 -2918836 + AluSx SINE Alu 1 307 -5 2334 81 0 19 chr17 82520578 82520886 -2917594 + AluSx SINE Alu 11 312 0 214 241 19 0 chr17 82521670 82521724 -2916756 + L2 LINE L2 3255 3309 -4 * 401 263 103 67 chr17 82521720 82521947 -2916533 - MIR SINE MIR -2 260 29 2054 134 0 19 chr17 82522836 82523149 -2915331 - AluSx SINE Alu -5 307 1 650 226 81 27 chr17 82523261 82523482 -2914998 - Charlie5 DNA MER1_type 0 2624 2392 198 0 0 0 chr17 82523482 82523504 -2914976 + (CA)n Simple_repeat Simple_repeat 1 22 0 2251 90 3 13 chr17 82523692 82523993 -2914487 - AluSx SINE Alu -14 298 1 260 384 85 14 chr17 82527616 82527827 -2910653 + L3b LINE CR1 1338 1563 -20 2296 100 3 0 chr17 82527877 82528187 -2910293 - AluSq SINE Alu -2 311 1 317 296 151 21 chr17 82528979 82529165 -2909315 + MIR SINE MIR 53 262 0 423 297 104 30 chr17 82532297 82532499 -2905981 + L2 LINE L2 3035 3251 -21 308 291 64 43 chr17 82533382 82533523 -2904957 - MIR3 SINE MIR -32 176 33 225 214 0 0 chr17 82534583 82534625 -2903855 + (CA)n Simple_repeat Simple_repeat 2 43 0 22 35 0 0 chr17 82534920 82534949 -2903531 + GC_rich Low_complexity Low_complexity 1 29 0 210 231 16 58 chr17 82535061 82535182 -2903298 + C-rich Low_complexity Low_complexity 6 121 0 39 60 0 0 chr17 82535214 82535281 -2903199 + GC_rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr17 82535758 82535779 -2902701 + GC_rich Low_complexity Low_complexity 1 21 0 390 21 0 0 chr17 82536309 82536356 -2902124 + (TG)n Simple_repeat Simple_repeat 2 48 0 406 302 17 0 chr17 82539734 82539850 -2898630 - MIR SINE MIR -123 139 22 196 374 109 7 chr17 82542196 82542343 -2896137 - L2 LINE L2 -9 3263 3102 180 321 36 24 chr17 82542973 82543057 -2895423 + MIR SINE MIR 63 147 -115 272 213 33 0 chr17 82543555 82543677 -2894803 + (TG)n Simple_repeat Simple_repeat 2 127 0 443 269 29 6 chr17 82543747 82543922 -2894558 + (TG)n Simple_repeat Simple_repeat 1 179 0 335 229 28 0 chr17 82543937 82544081 -2894399 + (TG)n Simple_repeat Simple_repeat 1 148 0 278 361 186 8 chr17 82544745 82544997 -2893483 + L3 LINE CR1 1179 1475 -102 829 240 34 53 chr17 82545016 82545073 -2893407 - MER33 DNA MER1_type -2261 324 267 240 100 0 0 chr17 82545073 82545113 -2893367 + (TATG)n Simple_repeat Simple_repeat 2 41 0 2119 81 0 4 chr17 82545118 82545391 -2893089 - AluSx SINE Alu -37 275 4 829 240 34 53 chr17 82545391 82545648 -2892832 - MER33 DNA MER1_type -2322 263 10 2280 96 0 10 chr17 82546118 82546432 -2892048 - AluSx SINE Alu -1 311 1 554 159 0 11 chr17 82546492 82546580 -2891900 + AluJ/FLAM SINE Alu 1 87 -225 * 635 158 0 0 chr17 82546575 82546670 -2891810 + FLAM_C SINE Alu 15 109 -34 31 26 0 0 chr17 82546670 82546708 -2891772 + AT_rich Low_complexity Low_complexity 1 38 0 936 236 0 10 chr17 82546759 82546967 -2891513 + MER58A DNA MER1_type 19 224 0 891 230 88 0 chr17 82547013 82547277 -2891203 - MER33 DNA MER1_type -38 286 1 196 287 101 23 chr17 82547469 82547598 -2890882 - L2 LINE L2 -490 2824 2686 636 79 48 8 chr17 82548137 82548263 -2890217 + CT-rich Low_complexity Low_complexity 4 134 0 312 358 74 11 chr17 82548265 82548441 -2890039 - HAL1 LINE L1 -1231 1276 1090 740 247 27 23 chr17 82548441 82548723 -2889757 - L1MB7 LINE L1 -14 6160 5889 291 287 164 8 chr17 82551112 82551234 -2887246 - MIR SINE MIR -29 233 93 643 190 44 7 chr17 82551384 82551521 -2886959 - L1MB7 LINE L1 -9 6175 6034 258 213 53 53 chr17 82552221 82552315 -2886165 + MIR SINE MIR 47 140 -68 316 220 31 5 chr17 82553720 82554114 -2884366 + G-rich Low_complexity Low_complexity 1 404 0 200 185 0 93 chr17 82554801 82554855 -2883625 + polypurine Low_complexity Low_complexity 1 49 0 265 274 222 26 chr17 82555666 82555819 -2882661 - MIR3 SINE MIR -7 201 19 469 305 190 19 chr17 82556160 82556293 -2882187 + L2 LINE L2 2678 2787 -485 180 0 0 0 chr17 82556293 82556313 -2882167 + (TCCC)n Simple_repeat Simple_repeat 4 23 0 469 305 190 19 chr17 82556313 82556651 -2881829 + L2 LINE L2 2787 3252 -20 713 287 15 0 chr17 82558744 82558946 -2879534 + MER58A DNA MER1_type 1 205 -19 1769 182 3 3 chr17 82560146 82560476 -2878004 + MLT1B LTR MaLR 29 358 -32 503 223 101 14 chr17 82560486 82560625 -2877855 + MIR SINE MIR 69 219 -43 208 256 0 60 chr17 82561880 82561997 -2876483 + (CA)n Simple_repeat Simple_repeat 2 111 0 252 0 0 0 chr17 82562835 82562863 -2875617 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 294 383 102 22 chr17 82562864 82562885 -2875595 - L2 LINE L2 -5 3267 3249 2182 132 0 0 chr17 82562885 82563189 -2875291 + AluSq SINE Alu 4 307 -6 294 383 102 22 chr17 82563189 82563441 -2875039 - L2 LINE L2 -23 3249 2972 2245 102 3 0 chr17 82563772 82564077 -2874403 - AluSg SINE Alu -4 306 1 354 169 0 0 chr17 82565618 82565683 -2872797 + (TGGA)n Simple_repeat Simple_repeat 2 66 0 2764 284 132 28 chr17 82565683 82567202 -2871278 + L2 LINE L2 1017 2692 -622 225 243 43 0 chr17 82567237 82567307 -2871173 + L2 LINE L2 2834 2906 -366 4278 91 6 5 chr17 82567330 82567990 -2870490 + L1MA1 LINE L1 5369 6029 -273 1800 159 9 19 chr17 82569134 82569449 -2869031 + AluJb SINE Alu 1 312 0 198 314 29 14 chr17 82569794 82569864 -2868616 - MIR3 SINE MIR -46 162 92 573 201 6 11 chr17 82570753 82570927 -2867553 + (TGGA)n Simple_repeat Simple_repeat 4 176 0 460 252 122 0 chr17 82571095 82571242 -2867238 - MER5B DNA MER1_type -13 165 1 2101 148 0 0 chr17 82572505 82572816 -2865664 - AluJb SINE Alu -1 311 1 300 255 220 50 chr17 82574852 82575052 -2863428 + L2 LINE L2 3019 3252 -20 2128 133 0 0 chr17 82576601 82576910 -2861570 + AluSq SINE Alu 1 309 -4 212 0 36 0 chr17 82576918 82576946 -2861534 + (TAAAAA)n Simple_repeat Simple_repeat 3 31 0 832 113 0 0 chr17 82576947 82577062 -2861418 + AluSq/x SINE Alu 1 115 -197 745 185 29 23 chr17 82577072 82577245 -2861235 + MLT1C LTR MaLR 293 466 -1 477 200 11 0 chr17 82577825 82577920 -2860560 - AluJo SINE Alu -9 303 208 541 212 23 23 chr17 82577930 82578062 -2860418 - AluJo SINE Alu -161 151 20 323 273 10 20 chr17 82578588 82578687 -2859793 - MER58A DNA MER1_type -9 98 1 483 292 76 0 chr17 82578695 82578866 -2859614 - MER5A DNA MER1_type 0 189 6 23 0 0 0 chr17 82580003 82580026 -2858454 + GC_rich Low_complexity Low_complexity 1 23 0 1062 104 12 18 chr17 82580245 82580409 -2858071 - AluSq SINE Alu -150 163 1 2248 86 0 20 chr17 82580691 82580994 -2857486 - AluSx SINE Alu -14 298 2 2060 134 0 0 chr17 82581024 82581323 -2857157 - AluSx SINE Alu -13 299 1 582 258 91 20 chr17 82581443 82581837 -2856643 + LTR16B LTR ERVL 4 461 -3 1977 140 14 0 chr17 82581922 82582214 -2856266 + AluSx SINE Alu 1 296 -16 329 331 94 28 chr17 82582651 82582832 -2855648 + HERVL LTR ERVL 1745 1937 -3827 186 189 0 0 chr17 82583037 82583074 -2855406 + (CA)n Simple_repeat Simple_repeat 1 37 0 271 277 45 9 chr17 82584284 82584396 -2854084 + HERVL LTR ERVL 4284 4399 -1255 1386 148 74 52 chr17 82587381 82587674 -2850806 - AluJo SINE Alu 0 304 6 308 343 36 29 chr17 82587994 82588134 -2850346 - L2 LINE L2 -20 3252 3112 638 187 32 0 chr17 82588186 82588309 -2850171 - MER3 DNA MER1_type 0 209 83 1966 139 0 0 chr17 82588321 82588608 -2849872 + AluJo SINE Alu 1 287 -25 360 0 0 0 chr17 82588851 82588891 -2849589 + (GGGTG)n Simple_repeat Simple_repeat 4 43 0 277 258 86 0 chr17 82589597 82589690 -2848790 + MER4C LTR ERV1 365 465 0 1104 125 133 4 chr17 82589691 82589931 -2848549 - Tigger7 DNA MER2_type -8 2479 2209 767 185 45 0 chr17 82589935 82590092 -2848388 - Tigger7 DNA MER2_type -562 171 8 254 314 23 0 chr17 82590103 82590189 -2848291 - L1MD3 LINE L1 -69 7926 7839 * 330 261 137 7 chr17 82590187 82590340 -2848140 + L1M4 LINE L1 4094 4266 -1880 1792 167 0 14 chr17 82590343 82590636 -2847844 + AluJo SINE Alu 1 289 -23 37 0 0 0 chr17 82590654 82590691 -2847789 + AT_rich Low_complexity Low_complexity 1 37 0 451 268 36 21 chr17 82590693 82591070 -2847410 + L1M4 LINE L1 4265 4793 -1353 733 289 78 7 chr17 82591356 82591519 -2846961 - L1MEc LINE L1 -4688 1708 1558 2218 129 135 5 chr17 82591519 82591898 -2846582 - MSTA LTR MaLR 0 428 1 733 289 78 7 chr17 82591898 82592146 -2846334 - L1MEc LINE L1 -4838 1558 1268 407 321 88 38 chr17 82593192 82593612 -2844868 + L2 LINE L2 2213 2653 -661 441 210 58 14 chr17 82594226 82594364 -2844116 - L1M4 LINE L1 -1097 5049 4906 309 346 40 0 chr17 82594848 82594949 -2843531 + L2 LINE L2 3168 3272 0 409 224 64 14 chr17 82595554 82595716 -2842764 + MLT1D LTR MaLR 1 167 -319 570 164 124 0 chr17 82595886 82596063 -2842417 - MER41B LTR ERV1 -434 201 3 1179 224 68 79 chr17 82596361 82596816 -2841664 - LTR7 LTR ERV1 0 450 1 5549 136 20 27 chr17 82597277 82598421 -2840059 + MER41-int LTR ERV1 3494 4629 -1317 32 62 0 0 chr17 82599542 82599590 -2838890 + GC_rich Low_complexity Low_complexity 1 48 0 21 36 0 0 chr17 82600007 82600035 -2838445 + AT_rich Low_complexity Low_complexity 1 28 0 324 0 0 0 chr17 82600260 82600296 -2838184 + (CA)n Simple_repeat Simple_repeat 1 36 0 379 371 75 32 chr17 82601021 82601513 -2836967 - L1MDa LINE L1 -1205 1302 834 1727 146 4 11 chr17 82603294 82603575 -2834905 - AluJb SINE Alu -33 279 1 339 313 61 0 chr17 82605203 82605302 -2833178 - MIR SINE MIR -71 191 87 487 200 4 52 chr17 82607498 82607747 -2830733 + GA-rich Low_complexity Low_complexity 1 237 0 335 41 20 0 chr17 82608079 82608128 -2830352 + (TG)n Simple_repeat Simple_repeat 1 50 0 1771 139 45 3 chr17 82609809 82610096 -2828384 + AluSx SINE Alu 1 299 -13 2080 99 4 0 chr17 82610657 82610930 -2827550 + AluSx SINE Alu 1 274 -38 820 98 17 40 chr17 82610930 82611104 -2827376 + (GGAA)n Simple_repeat Simple_repeat 4 173 0 362 306 12 44 chr17 82611161 82611321 -2827159 + MIR SINE MIR 81 235 -27 411 73 0 0 chr17 82611788 82611843 -2826637 + (TG)n Simple_repeat Simple_repeat 2 56 0 269 278 14 0 chr17 82611899 82611971 -2826509 - L2 LINE L2 0 3313 3241 425 343 57 52 chr17 82613881 82614129 -2824351 - MIR SINE MIR -12 250 2 215 293 70 51 chr17 82615427 82615584 -2822896 + L2 LINE L2 2837 2996 -276 187 295 85 31 chr17 82616331 82616460 -2822020 - L2 LINE L2 -469 2845 2710 2191 115 3 0 chr17 82618428 82618732 -2819748 + AluSx SINE Alu 1 305 -7 379 361 44 0 chr17 82619245 82619425 -2819055 - MIR SINE MIR -26 236 49 2052 118 0 10 chr17 82619571 82619867 -2818613 + AluSx SINE Alu 1 293 -19 2361 86 0 3 chr17 82620850 82621154 -2817326 + AluSx SINE Alu 9 311 -1 322 246 177 23 chr17 82623201 82623331 -2815149 - MIR SINE MIR -77 185 36 626 187 11 22 chr17 82624116 82624298 -2814182 + (TG)n Simple_repeat Simple_repeat 1 180 0 211 210 0 32 chr17 82625231 82625293 -2813187 + C-rich Low_complexity Low_complexity 3 62 0 383 246 131 0 chr17 82625312 82625434 -2813046 + MIR SINE MIR 46 183 -79 309 275 22 0 chr17 82625526 82625617 -2812863 + MIR3 SINE MIR 104 196 -12 541 321 41 23 chr17 82627421 82627639 -2810841 + MIR SINE MIR 6 227 -35 2185 110 3 0 chr17 82627697 82628006 -2810474 - AluSx SINE Alu -2 310 1 1942 239 59 5 chr17 82628019 82628592 -2809888 - L1MB7 LINE L1 0 6184 5581 426 146 0 0 chr17 82629231 82629313 -2809167 + (GA)n Simple_repeat Simple_repeat 1 82 0 493 250 81 19 chr17 82629986 82630146 -2808334 - MIR SINE MIR -19 243 74 263 319 35 0 chr17 82632646 82632753 -2805727 - MIR SINE MIR -75 133 58 473 199 6 114 chr17 82632942 82633034 -2805446 + MER45A DNA AcHobo 31 99 -1482 2339 84 0 0 chr17 82633034 82633332 -2805148 + AluSq SINE Alu 1 298 -15 473 199 6 114 chr17 82633332 82633405 -2805075 + MER45A DNA AcHobo 99 178 0 236 128 0 21 chr17 82633412 82633459 -2805021 + (GAAAA)n Simple_repeat Simple_repeat 1 46 0 311 265 82 0 chr17 82633459 82633557 -2804923 + MIR SINE MIR 50 155 -107 416 343 141 16 chr17 82633810 82634384 -2804096 - L2 LINE L2 -691 2623 1978 1259 212 114 40 chr17 82635029 82635449 -2803031 - MLT1C LTR MaLR 0 467 17 226 340 61 14 chr17 82635960 82636107 -2802373 + L3 LINE CR1 1262 1415 -162 2160 134 0 0 chr17 82636720 82637025 -2801455 + AluSx SINE Alu 1 305 -7 281 324 19 0 chr17 82637050 82637155 -2801325 - MIR3 SINE MIR -11 197 91 966 280 52 25 chr17 82637258 82637882 -2800598 - MER21B LTR ERV1 -147 716 40 976 207 105 76 chr17 82639789 82639907 -2798573 - MLT1C LTR MaLR 0 467 354 854 148 0 8 chr17 82639907 82640035 -2798445 + AluJo/FLAM SINE Alu 2 128 -174 2022 102 60 0 chr17 82640035 82640318 -2798162 + AluSq SINE Alu 1 300 -13 976 207 105 76 chr17 82640318 82640641 -2797839 - MLT1C LTR MaLR -112 355 7 246 261 261 0 chr17 82640653 82640741 -2797739 - L2 LINE L2 -3 3310 3200 366 233 58 0 chr17 82642732 82642835 -2795645 + MER5A DNA MER1_type 4 112 -77 349 337 74 65 chr17 82643090 82643520 -2794960 - L2 LINE L2 -1 3312 2879 285 339 57 8 chr17 82644489 82644613 -2793867 + MIR SINE MIR 104 233 -29 23 0 0 0 chr17 82646486 82646509 -2791971 + AT_rich Low_complexity Low_complexity 1 23 0 2090 147 0 0 chr17 82646531 82646838 -2791642 + AluSx SINE Alu 1 307 -5 2160 105 0 13 chr17 82647425 82647775 -2790705 - AluSx SINE Alu 0 347 2 24 0 0 0 chr17 82648066 82648090 -2790390 + AT_rich Low_complexity Low_complexity 1 24 0 312 27 0 0 chr17 82649159 82649196 -2789284 + (CA)n Simple_repeat Simple_repeat 2 38 0 411 364 78 23 chr17 82650422 82650639 -2787841 + MIR SINE MIR 20 248 -14 25 31 0 0 chr17 82650866 82650898 -2787582 + AT_rich Low_complexity Low_complexity 1 32 0 492 279 87 0 chr17 82651744 82651916 -2786564 - MLT1D LTR MaLR -36 469 283 346 323 227 15 chr17 82651930 82652397 -2786083 - L2 LINE L2 -809 2505 1940 1594 127 117 14 chr17 82653309 82653592 -2784888 + AluSx SINE Alu 1 312 0 260 68 0 45 chr17 82653594 82653638 -2784842 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 219 139 0 0 chr17 82653636 82653672 -2784808 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 * 1779 233 28 8 chr17 82654539 82655036 -2783444 - MER74A LTR ERVL -39 519 13 1086 110 6 0 chr17 82656027 82656191 -2782289 + AluY SINE Alu 147 311 0 386 238 123 8 chr17 82656453 82656575 -2781905 - MIR SINE MIR -28 234 99 2127 126 3 0 chr17 82656801 82657102 -2781378 + AluSx SINE Alu 1 302 -10 2021 122 17 0 chr17 82658488 82658783 -2779697 + AluSx SINE Alu 2 301 -11 476 182 0 0 chr17 82658784 82658871 -2779609 + L1MB5 LINE L1 5741 5815 -359 607 183 52 0 chr17 82658871 82658984 -2779496 + L1MB3 LINE L1 6060 6180 -3 476 182 0 0 chr17 82658984 82658998 -2779482 + L1MB5 LINE L1 5814 5827 -347 1209 154 96 0 chr17 82659128 82659348 -2779132 + AluSg/x SINE Alu 71 311 -1 666 151 37 28 chr17 82659358 82659716 -2778764 + GA-rich Low_complexity Low_complexity 1 361 0 1089 251 58 24 chr17 82659935 82660314 -2778166 - MLT1C LTR MaLR -4 463 72 197 231 77 15 chr17 82660589 82660654 -2777826 + MIR SINE MIR 59 127 -135 453 317 9 71 chr17 82661201 82661425 -2777055 + MIR SINE MIR 49 258 -4 300 211 0 0 chr17 82661804 82661880 -2776600 + CT-rich Low_complexity Low_complexity 2 77 0 38 39 0 0 chr17 82661990 82662042 -2776438 + AT_rich Low_complexity Low_complexity 1 52 0 1514 186 19 30 chr17 82662408 82662780 -2775700 + MLT1A2 LTR MaLR 6 373 -1 1621 174 3 17 chr17 82663099 82663239 -2775241 + AluJo SINE Alu 1 141 -171 231 88 0 0 chr17 82663239 82663273 -2775207 + (TAGA)n Simple_repeat Simple_repeat 1 34 0 1621 174 3 17 chr17 82663273 82663426 -2775054 + AluJo SINE Alu 141 290 -22 2308 86 0 19 chr17 82663449 82663764 -2774716 + AluY SINE Alu 1 309 -2 204 255 235 0 chr17 82663798 82663900 -2774580 + MIR SINE MIR 124 249 -13 315 281 102 39 chr17 82664621 82664749 -2773731 - L2 LINE L2 -1 3271 3136 2235 108 0 0 chr17 82666178 82666475 -2772005 + AluSx SINE Alu 1 297 -15 402 289 84 36 chr17 82666944 82667110 -2771370 + MIR SINE MIR 77 250 -12 731 233 6 0 chr17 82667291 82667467 -2771013 + L1MB4 LINE L1 6004 6180 0 1506 141 31 8 chr17 82667867 82668123 -2770357 + AluSx SINE Alu 44 305 -7 464 172 0 21 chr17 82669299 82669383 -2769097 - Tigger5 DNA MER2_type -2 2321 2238 2279 93 7 3 chr17 82669383 82669693 -2768787 + AluSx SINE Alu 1 311 -1 237 136 91 0 chr17 82669741 82669785 -2768695 - Tigger5 DNA MER2_type -2275 48 1 2292 77 7 0 chr17 82670508 82670805 -2767675 + AluSq SINE Alu 1 299 -14 2583 274 27 16 chr17 82670886 82671700 -2766780 - L1ME1 LINE L1 -4 6231 5409 1766 243 14 25 chr17 82671711 82672226 -2766254 - L1ME1 LINE L1 -1086 5129 4621 1607 130 87 16 chr17 82672230 82672553 -2765927 + THE1C LTR MaLR 30 375 0 1138 222 57 3 chr17 82672561 82672912 -2765568 - L1ME1 LINE L1 -1589 4626 4257 1465 268 65 17 chr17 82672936 82673533 -2764947 - L1ME1 LINE L1 -5742 654 29 2208 90 0 3 chr17 82673856 82674156 -2764324 + AluSg SINE Alu 1 299 -11 370 348 32 0 chr17 82674495 82674638 -2763842 - MIR SINE MIR -62 146 47 2203 119 0 7 chr17 82674830 82675140 -2763340 - AluSx SINE Alu -4 308 1 1764 167 3 19 chr17 82675152 82675469 -2763011 - AluSx SINE Alu 0 312 1 319 104 0 0 chr17 82675745 82675793 -2762687 - Alu SINE Alu -254 48 1 2213 98 3 19 chr17 82675804 82676121 -2762359 - AluSx SINE Alu 0 312 1 213 317 0 0 chr17 82677968 82678028 -2760452 + GA-rich Low_complexity Low_complexity 4 63 0 503 337 36 20 chr17 82678294 82678490 -2759990 - MIR SINE MIR -44 218 20 748 345 61 18 chr17 82678730 82679312 -2759168 + L2 LINE L2 2692 3303 -10 2075 133 3 0 chr17 82679477 82679778 -2758702 + AluSx SINE Alu 1 302 -10 831 346 105 58 chr17 82680008 82680932 -2757548 + L3 LINE CR1 583 1549 -28 215 371 0 8 chr17 82681713 82681837 -2756643 + (TG)n Simple_repeat Simple_repeat 2 124 0 221 298 74 41 chr17 82682611 82682732 -2755748 - MIR SINE MIR -79 183 59 215 267 0 23 chr17 82684625 82684711 -2753769 + GA-rich Low_complexity Low_complexity 2 85 0 213 108 0 0 chr17 82685625 82685662 -2752818 + (TG)n Simple_repeat Simple_repeat 1 37 0 306 319 77 40 chr17 82687381 82687629 -2750851 + L2 LINE L2 3016 3272 0 441 263 14 9 chr17 82688160 82688312 -2750168 + MIR SINE MIR 3 153 -55 2070 108 0 7 chr17 82691910 82692197 -2746283 + AluSx SINE Alu 1 285 -27 192 40 0 0 chr17 82692785 82692810 -2745670 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 283 278 37 19 chr17 82693084 82693192 -2745288 + L2 LINE L2 3146 3255 -17 262 364 88 27 chr17 82694422 82694683 -2743797 + L1MD1 LINE L1 5613 5889 -232 2496 60 0 13 chr17 82695041 82695355 -2743125 - AluY SINE Alu -1 310 1 203 316 149 35 chr17 82695436 82695550 -2742930 - L2 LINE L2 -20 3252 3126 368 260 58 45 chr17 82696667 82696821 -2741659 - MER5A DNA MER1_type -33 156 1 1696 129 0 4 chr17 82697146 82697386 -2741094 - AluSx SINE Alu -23 289 51 535 276 95 0 chr17 82697402 82697623 -2740857 + L1MD1 LINE L1 6000 6241 -1 214 370 56 28 chr17 82699435 82699543 -2738937 + L3 LINE CR1 268 378 -1199 372 216 82 10 chr17 82699793 82699890 -2738590 - L2 LINE L2 -1 3271 3168 1993 123 17 0 chr17 82701936 82702228 -2736252 + AluSg SINE Alu 1 297 -13 493 293 95 4 chr17 82705558 82705790 -2732690 - LTR16C LTR ERVL -24 467 215 250 321 38 46 chr17 82705995 82706126 -2732354 - L2 LINE L2 -3 3269 3140 335 252 42 0 chr17 82710292 82710411 -2728069 + CT-rich Low_complexity Low_complexity 4 127 0 203 86 0 29 chr17 82710535 82710570 -2727910 + (CCCCCA)n Simple_repeat Simple_repeat 4 37 0 347 297 61 20 chr17 82711869 82712017 -2726463 - MIR SINE MIR -70 192 39 220 259 247 0 chr17 82713113 82713198 -2725282 + MIR SINE MIR 39 144 -118 259 229 100 0 chr17 82714226 82714296 -2724184 - MER20 DNA MER1_type -75 144 68 1471 110 6 158 chr17 82714318 82714673 -2723807 + MER1B DNA MER1_type 39 339 0 761 251 6 11 chr17 82715014 82715189 -2723291 + MER5B DNA MER1_type 3 176 -2 246 143 125 0 chr17 82715199 82715255 -2723225 + MER5A DNA MER1_type 50 112 -77 239 296 96 9 chr17 82715756 82715871 -2722609 - MIR3 SINE MIR -40 168 44 378 286 43 7 chr17 82718718 82718858 -2719622 - MIR SINE MIR -39 223 79 228 281 61 28 chr17 82719865 82719976 -2718504 + MIR SINE MIR 31 147 -61 340 271 22 64 chr17 82720185 82720357 -2718123 + MIR SINE MIR 18 185 -62 365 327 18 20 chr17 82720476 82720657 -2717823 + MIR SINE MIR 1 182 -62 182 265 6 18 chr17 82721397 82721567 -2716913 + (TG)n Simple_repeat Simple_repeat 1 168 0 367 292 0 14 chr17 82721579 82721723 -2716757 + (TG)n Simple_repeat Simple_repeat 2 143 0 448 260 11 28 chr17 82721740 82721921 -2716559 + (TG)n Simple_repeat Simple_repeat 1 178 0 242 202 125 58 chr17 82723075 82723179 -2715301 + MER20 DNA MER1_type 1 111 -108 180 0 0 0 chr17 82723264 82723284 -2715196 + (TG)n Simple_repeat Simple_repeat 1 20 0 252 289 39 48 chr17 82724471 82724575 -2713905 + L3b LINE CR1 1273 1375 -208 220 250 226 0 chr17 82725884 82725968 -2712512 - MER5A DNA MER1_type -83 106 4 203 315 11 45 chr17 82727066 82727155 -2711325 + L2 LINE L2 3187 3272 0 225 0 0 0 chr17 82728235 82728260 -2710220 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 450 144 22 0 chr17 82728808 82728898 -2709582 - Charlie4 DNA MER1_type -59 1902 1811 226 166 6 131 chr17 82729265 82729440 -2709040 + (CA)n Simple_repeat Simple_repeat 1 153 0 726 179 70 0 chr17 82730690 82730846 -2707634 - MER63A DNA MER1_type -42 168 2 500 324 108 9 chr17 82731145 82731367 -2707113 + MIR SINE MIR 19 262 0 298 275 25 0 chr17 82731395 82731475 -2707005 - L2 LINE L2 -10 3262 3181 216 320 146 0 chr17 82732600 82732703 -2705777 + MIR3 SINE MIR 81 198 -10 325 319 138 19 chr17 82733617 82733827 -2704653 + L3 LINE CR1 1332 1566 -11 182 338 0 29 chr17 82735165 82735233 -2703247 - MIR SINE MIR -110 152 87 254 303 83 36 chr17 82735374 82735711 -2702769 - LTR33 LTR ERVL -8 513 161 646 216 20 55 chr17 82736241 82736440 -2702040 + MER63A DNA MER1_type 1 192 -18 271 271 13 13 chr17 82736529 82736680 -2701800 + C-rich Low_complexity Low_complexity 4 154 0 202 266 0 31 chr17 82736701 82736765 -2701715 + C-rich Low_complexity Low_complexity 3 64 0 * 263 290 5 78 chr17 82736718 82736911 -2701569 + CT-rich Low_complexity Low_complexity 1 179 0 238 355 0 25 chr17 82736855 82736976 -2701504 + C-rich Low_complexity Low_complexity 3 120 0 * 325 363 39 34 chr17 82737665 82737844 -2700636 - L1ME LINE L1 -335 5786 5607 2078 102 0 7 chr17 82737975 82738259 -2700221 + AluSx SINE Alu 25 306 -6 1821 150 0 11 chr17 82738278 82738552 -2699928 + AluJb SINE Alu 9 279 -33 25 0 0 0 chr17 82738554 82738579 -2699901 + AT_rich Low_complexity Low_complexity 1 25 0 1004 111 0 0 chr17 82738678 82738813 -2699667 + AluSq/x SINE Alu 1 135 -178 2244 88 0 0 chr17 82738813 82739271 -2699209 + AluSx SINE Alu 1 458 0 393 102 0 0 chr17 82739334 82739393 -2699087 + (CA)n Simple_repeat Simple_repeat 2 60 0 280 358 123 15 chr17 82739745 82739949 -2698531 - L2 LINE L2 -2 3270 3045 274 325 41 24 chr17 82740258 82740381 -2698099 - MIR3 SINE MIR -37 171 47 273 314 14 0 chr17 82740599 82740669 -2697811 - L2 LINE L2 0 3272 3202 252 143 0 0 chr17 82740791 82740833 -2697647 + (CG)n Simple_repeat Simple_repeat 1 42 0 1353 158 0 0 chr17 82741568 82741802 -2696678 + MER41B LTR ERV1 283 516 -119 951 152 13 0 chr17 82741802 82741960 -2696520 - AluSg/x SINE Alu -1 311 152 372 123 15 0 chr17 82741962 82742027 -2696453 + MER41A LTR ERV1 33 98 -456 776 173 24 0 chr17 82742050 82742177 -2696303 - AluSq/x SINE Alu -183 130 1 669 142 8 0 chr17 82742177 82742297 -2696183 + MER41B LTR ERV1 515 635 0 254 324 12 41 chr17 82742464 82742634 -2695846 - L1M4 LINE L1 -1248 4898 4734 3351 149 20 28 chr17 82744568 82744674 -2693806 - MER41-int LTR ERV1 -230 5716 5611 2558 131 54 2 chr17 82744674 82745080 -2693400 + MSTA LTR MaLR 1 427 -1 3351 149 20 28 chr17 82745080 82745677 -2692803 - MER41-int LTR ERV1 -335 5611 5019 1544 86 10 5 chr17 82748157 82748366 -2690114 - AluSq SINE Alu -103 210 1 211 286 88 27 chr17 82748824 82748971 -2689509 + L2 LINE L2 2927 3082 -190 942 174 15 14 chr17 82750638 82750860 -2687620 + MER41-int LTR ERV1 355 1453 -4493 3676 137 52 6 chr17 82750869 82751594 -2686886 + MER41-int LTR ERV1 2811 3569 -2377 210 377 6 29 chr17 82752888 82753063 -2685417 + C-rich Low_complexity Low_complexity 3 173 0 473 316 184 12 chr17 82753476 82753814 -2684666 - L2 LINE L2 -20 3252 2973 180 0 0 0 chr17 82753814 82753834 -2684646 + (GGGA)n Simple_repeat Simple_repeat 4 23 0 473 316 184 12 chr17 82753834 82753967 -2684513 - L2 LINE L2 -299 2973 2678 218 309 8 48 chr17 82754026 82754152 -2684328 + C-rich Low_complexity Low_complexity 6 126 0 674 206 0 41 chr17 82755624 82755818 -2682662 + MLT1B LTR MaLR 29 214 -176 25 31 0 0 chr17 82756357 82756389 -2682091 + GC_rich Low_complexity Low_complexity 1 32 0 407 256 105 15 chr17 82757833 82757966 -2680514 - MIR SINE MIR -43 219 75 21 0 0 0 chr17 82758218 82758239 -2680241 + GC_rich Low_complexity Low_complexity 1 21 0 188 100 33 33 chr17 82758257 82758317 -2680163 + (CGGG)n Simple_repeat Simple_repeat 3 62 0 246 306 0 0 chr17 82758339 82758447 -2680033 + G-rich Low_complexity Low_complexity 1 108 0 1597 164 7 36 chr17 82808505 82808640 -2629840 + AluSx SINE Alu 1 138 -174 1850 159 3 0 chr17 82808640 82808942 -2629538 + AluSx SINE Alu 1 303 -9 1597 164 7 36 chr17 82808942 82809110 -2629370 + AluSx SINE Alu 138 295 -17 2203 117 0 0 chr17 82809110 82809419 -2629061 + AluSc SINE Alu 1 309 0 186 43 0 0 chr17 82809746 82809769 -2628711 + (A)n Simple_repeat Simple_repeat 1 23 0 983 169 0 0 chr17 82809956 82810128 -2628352 - AluSg/x SINE Alu -4 308 137 2095 109 0 26 chr17 82810386 82810561 -2627919 - AluSx SINE Alu -7 305 127 195 42 0 0 chr17 82810561 82810585 -2627895 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2044 93 11 0 chr17 82810585 82810865 -2627615 - AluSx SINE Alu -29 283 1 2095 109 0 26 chr17 82810865 82811001 -2627479 - AluSx SINE Alu -183 129 1 281 236 11 34 chr17 82811041 82811130 -2627350 + L1MC5 LINE L1 7831 7917 -44 1682 99 0 0 chr17 82811557 82811778 -2626702 - AluSq SINE Alu -92 221 1 1813 150 23 7 chr17 82811806 82812113 -2626367 - AluSx SINE Alu 0 312 1 1111 53 0 0 chr17 82812297 82812429 -2626051 - AluY SINE Alu -179 132 1 2164 58 25 0 chr17 82812672 82812990 -2625490 - AluY SINE Alu 0 325 1 2303 77 3 0 chr17 82812993 82813290 -2625190 - AluSp SINE Alu -15 298 1 2203 99 0 7 chr17 82813455 82813759 -2624721 - AluSx SINE Alu -10 302 1 1747 105 0 0 chr17 82814104 82814332 -2624148 - AluSx SINE Alu -84 228 1 205 247 56 56 chr17 82815577 82815666 -2622814 + L2 LINE L2 3184 3272 0 353 315 68 7 chr17 82815930 82816076 -2622404 - L1ME LINE L1 -443 5678 5524 180 0 0 0 chr17 82816543 82816563 -2621917 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2240 82 3 0 chr17 82816563 82816857 -2621623 - AluSx SINE Alu -17 295 1 777 167 8 15 chr17 82816880 82817012 -2621468 - AluJo SINE Alu -176 136 6 1850 136 3 14 chr17 82817072 82817367 -2621113 + AluSx SINE Alu 1 292 -20 2271 101 0 0 chr17 82817369 82817676 -2620804 + AluSc SINE Alu 1 307 -2 2423 44 0 0 chr17 82818516 82818813 -2619667 + AluY SINE Alu 1 297 -14 2226 154 71 49 chr17 82819570 82820064 -2618416 + MLT1D LTR MaLR 1 505 0 1845 112 4 0 chr17 82820121 82820363 -2618117 + AluSx SINE Alu 1 243 -69 1500 153 38 59 chr17 82820489 82820828 -2617652 - MER44D DNA MER2_type -1 608 7 2223 125 0 0 chr17 82820888 82821185 -2617295 + AluSx SINE Alu 1 297 -15 1717 118 137 0 chr17 82821258 82821520 -2616960 - AluSx SINE Alu -14 298 1 525 279 128 26 chr17 82821814 82822197 -2616283 - L2 LINE L2 -4 3309 2888 238 232 0 36 chr17 82822600 82822656 -2615824 + L2 LINE L2 3206 3259 -13 2491 80 0 13 chr17 82824105 82824419 -2614061 + AluSg SINE Alu 1 310 0 1949 102 106 14 chr17 82824530 82824814 -2613666 - AluSg SINE Alu 0 310 1 2220 103 0 33 chr17 82825284 82825584 -2612896 + AluSq SINE Alu 1 290 -23 921 147 77 65 chr17 82825594 82825764 -2612716 + AluSg/x SINE Alu 130 301 -9 182 37 37 0 chr17 82826372 82826399 -2612081 + (CTGGGG)n Simple_repeat Simple_repeat 2 29 0 294 51 0 0 chr17 82826967 82827006 -2611474 + AluSp/q SINE Alu 178 216 -87 384 169 56 0 chr17 82827040 82827111 -2611369 + Tigger5 DNA MER2_type 2249 2323 0 1200 108 0 0 chr17 82827320 82827570 -2610910 + (TA)n Simple_repeat Simple_repeat 1 250 0 207 289 0 0 chr17 82827935 82827987 -2610493 + (CATA)n Simple_repeat Simple_repeat 2 53 0 937 193 0 0 chr17 82828808 82828958 -2609522 - FRAM SINE Alu -15 161 12 494 247 47 26 chr17 82828962 82829152 -2609328 - LTR40c LTR ERVL -55 410 217 2374 87 3 31 chr17 82829181 82829503 -2608977 - AluSp SINE Alu 0 313 1 715 278 57 22 chr17 82829684 82829981 -2608499 - L1ME LINE L1 -325 5796 5486 1936 98 78 34 chr17 82829981 82830276 -2608204 - AluSx SINE Alu -4 308 1 715 278 57 22 chr17 82830276 82830295 -2608185 - L1ME LINE L1 -635 5486 5469 300 274 145 17 chr17 82830433 82830550 -2607930 - L2 LINE L2 0 3313 3182 1713 94 0 5 chr17 82830680 82830892 -2607588 + AluY SINE Alu 3 213 -98 320 43 0 0 chr17 82830892 82830939 -2607541 + AluY SINE Alu 262 308 0 706 161 0 0 chr17 82831088 82831200 -2607280 - FRAM SINE Alu -19 157 46 2259 120 3 13 chr17 82831536 82831716 -2606764 - AluSq SINE Alu 0 313 136 2240 125 0 0 chr17 82831716 82832021 -2606459 - AluSc SINE Alu -4 305 1 2259 120 3 13 chr17 82832021 82832156 -2606324 - AluSq SINE Alu -177 136 1 235 320 78 43 chr17 82832397 82832628 -2605852 - L2 LINE L2 -218 3054 2816 1932 144 31 0 chr17 82832723 82833015 -2605465 - AluSx SINE Alu -8 304 4 27 0 0 0 chr17 82833018 82833045 -2605435 + AT_rich Low_complexity Low_complexity 1 27 0 213 224 17 17 chr17 82833049 82833107 -2605373 + GA-rich Low_complexity Low_complexity 4 61 0 210 376 9 0 chr17 82834026 82834135 -2604345 + L2 LINE L2 2266 2375 -939 309 274 0 0 chr17 82834252 82834358 -2604122 + (TCCA)n Simple_repeat Simple_repeat 2 107 0 746 160 0 0 chr17 82834585 82834704 -2603776 - FLAM_C SINE Alu -13 120 2 374 335 72 42 chr17 82834812 82835048 -2603432 - MIR SINE MIR -18 244 2 809 119 56 0 chr17 82835791 82835917 -2602563 - FLAM_C SINE Alu 0 133 1 2151 146 108 36 chr17 82836636 82836986 -2601494 - MER21A LTR ERV1 0 931 608 2234 89 44 0 chr17 82836986 82837279 -2601201 - AluSq SINE Alu -7 306 1 2151 146 108 36 chr17 82837279 82837662 -2600818 - MER21A LTR ERV1 -323 608 32 1791 154 20 23 chr17 82837676 82837981 -2600499 + AluJb SINE Alu 1 304 -8 1510 127 154 0 chr17 82838343 82838602 -2599878 + AluSx SINE Alu 1 299 -3 1648 207 7 3 chr17 82838841 82839140 -2599340 - AluJo SINE Alu -12 300 1 1859 152 3 58 chr17 82839719 82840049 -2598431 + AluJb SINE Alu 1 312 0 2335 78 14 0 chr17 82840276 82840571 -2597909 + AluSq SINE Alu 1 299 -14 238 291 12 42 chr17 82840925 82841090 -2597390 + G-rich Low_complexity Low_complexity 2 161 0 199 84 0 95 chr17 82841094 82841189 -2597291 + (CGGGGG)n Simple_repeat Simple_repeat 4 89 0 24 77 0 0 chr17 82841420 82841472 -2597008 + GC_rich Low_complexity Low_complexity 1 52 0 1309 151 148 33 chr17 82842310 82842443 -2596037 - AluJo SINE Alu 0 302 186 368 0 43 0 chr17 82842443 82842490 -2595990 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2249 84 0 11 chr17 82842490 82842776 -2595704 - AluSx SINE Alu -29 283 1 1309 151 148 33 chr17 82842776 82842912 -2595568 - AluJo SINE Alu -115 187 1 1334 161 49 42 chr17 82842980 82843265 -2595215 - AluJo SINE Alu -25 287 1 1916 173 123 20 chr17 82843579 82844036 -2594444 - MLT1D LTR MaLR -1 504 1 2479 91 3 0 chr17 82844073 82844382 -2594098 - AluSp SINE Alu -3 310 1 369 185 213 37 chr17 82844707 82844815 -2593665 - FLAM_C SINE Alu -1 132 6 229 173 0 25 chr17 82844931 82845012 -2593468 + (TA)n Simple_repeat Simple_repeat 1 79 0 264 141 28 14 chr17 82845116 82845187 -2593293 + (TA)n Simple_repeat Simple_repeat 1 72 0 2196 100 10 7 chr17 82845215 82845515 -2592965 + AluSx SINE Alu 3 303 -9 492 135 0 65 chr17 82845581 82845766 -2592714 + (TA)n Simple_repeat Simple_repeat 1 173 0 517 198 0 0 chr17 82845843 82845939 -2592541 - L1M4 LINE L1 -556 5618 5523 279 0 0 0 chr17 82846240 82846271 -2592209 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2291 104 0 0 chr17 82846273 82846562 -2591918 - AluSx SINE Alu -23 289 1 2355 99 3 3 chr17 82847204 82847507 -2590973 - AluSx SINE Alu -9 303 1 844 99 8 0 chr17 82847698 82847819 -2590661 - AluSg/x SINE Alu -2 310 189 277 381 46 14 chr17 82847825 82848043 -2590437 + L2 LINE L2 2897 3121 -151 272 194 28 0 chr17 82848500 82848572 -2589908 + (TG)n Simple_repeat Simple_repeat 2 75 0 2122 119 27 0 chr17 82848935 82849229 -2589251 + AluSx SINE Alu 5 306 -6 2254 114 0 10 chr17 82850376 82850682 -2587798 - AluSx SINE Alu -9 303 1 222 37 0 0 chr17 82850682 82850709 -2587771 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 2271 75 7 0 chr17 82850709 82850989 -2587491 - AluSx SINE Alu -30 282 1 21 36 0 0 chr17 82852647 82852675 -2585805 + GC_rich Low_complexity Low_complexity 1 28 0 2101 87 35 7 chr17 82854598 82854887 -2583593 - AluSg1 SINE Alu -1 308 12 965 164 6 0 chr17 82854889 82855060 -2583420 - FAM SINE Alu -3 172 1 189 365 95 8 chr17 82855509 82855635 -2582845 - MIR SINE MIR -105 157 21 1404 160 61 29 chr17 82855789 82856102 -2582378 - MER33 DNA MER1_type -1 323 1 336 119 0 0 chr17 82856151 82856210 -2582270 + (TG)n Simple_repeat Simple_repeat 2 60 0 198 71 0 0 chr17 82857980 82858008 -2580472 + (TA)n Simple_repeat Simple_repeat 2 29 0 858 228 0 6 chr17 82858010 82858177 -2580303 - AluJo SINE Alu -22 290 125 331 165 0 114 chr17 82858223 82858270 -2580210 + AluJo SINE Alu 86 122 -180 1925 115 63 14 chr17 82858270 82858556 -2579924 + AluSx SINE Alu 1 300 -12 331 165 0 114 chr17 82858556 82858587 -2579893 + AluJo SINE Alu 122 155 -147 292 229 95 0 chr17 82858614 82858719 -2579761 + L1M4 LINE L1 3411 3525 -2621 1621 141 52 39 chr17 82859503 82859808 -2578672 - AluJo SINE Alu -3 309 1 290 276 19 19 chr17 82860304 82860409 -2578071 - MIR SINE MIR -94 168 64 729 90 9 9 chr17 82860576 82860687 -2577793 - AluSq/x SINE Alu -179 134 24 414 329 20 13 chr17 82861535 82861684 -2576796 + MER5A DNA MER1_type 40 189 0 1820 178 3 25 chr17 82861888 82862202 -2576278 - AluJb SINE Alu -5 307 1 2072 109 58 0 chr17 82862233 82862526 -2575954 - AluSx SINE Alu 0 312 3 1769 174 75 0 chr17 82862691 82863012 -2575468 - MER7A DNA MER2_type -3 343 1 330 192 135 10 chr17 82863016 82863120 -2575360 + L1ME3 LINE L1 5922 6038 -124 290 205 37 0 chr17 82863092 82863189 -2575291 + L1ME2 LINE L1 6028 6132 -30 * 1196 134 5 27 chr17 82863297 82863483 -2574997 - AluSx SINE Alu -130 182 1 1144 165 0 0 chr17 82863498 82863668 -2574812 + FRAM SINE Alu 1 165 -11 491 193 14 28 chr17 82863807 82863952 -2574528 + (TATG)n Simple_repeat Simple_repeat 2 144 0 251 196 0 0 chr17 82863963 82864014 -2574466 + MER4-int LTR ERV1 1112 1162 -5436 391 151 0 23 chr17 82864017 82864103 -2574377 + (TATG)n Simple_repeat Simple_repeat 4 87 0 2388 100 0 6 chr17 82864464 82864775 -2573705 - AluSc SINE Alu 0 309 1 2000 100 25 7 chr17 82864875 82865156 -2573324 - AluSx SINE Alu -26 286 1 2445 66 3 28 chr17 82866966 82867285 -2571195 - AluY SINE Alu 0 311 1 1609 188 11 4 chr17 82867495 82867766 -2570714 - AluJo SINE Alu -19 293 21 2301 98 0 3 chr17 82867809 82868105 -2570375 - AluSc SINE Alu -14 295 1 910 142 18 12 chr17 82868133 82868302 -2570178 + L1MC4 LINE L1 7748 7917 -125 206 75 50 50 chr17 82868303 82868343 -2570137 + (CATA)n Simple_repeat Simple_repeat 3 42 0 1750 169 28 10 chr17 82868793 82869083 -2569397 + AluJb SINE Alu 1 295 -17 573 200 0 39 chr17 82869120 82869250 -2569230 + AluJb SINE Alu 171 295 -17 2042 102 4 0 chr17 82869260 82869515 -2568965 + AluSx SINE Alu 34 289 -23 1138 143 40 85 chr17 82869520 82869744 -2568736 + AluJo SINE Alu 86 299 -13 271 265 83 77 chr17 82870498 82870679 -2567801 - L2 LINE L2 -10 3303 3122 1667 178 3 31 chr17 82870822 82871115 -2567365 + AluJo SINE Alu 1 285 -27 1085 197 6 0 chr17 82871369 82871547 -2566933 + AluSx SINE Alu 1 179 -133 27 0 0 0 chr17 82874742 82874769 -2563711 + AT_rich Low_complexity Low_complexity 1 27 0 252 0 0 0 chr17 82874796 82874824 -2563656 + (T)n Simple_repeat Simple_repeat 1 28 0 648 74 84 0 chr17 82874840 82874935 -2563545 - L1PA10 LINE L1 -13 6155 6053 1367 127 9 18 chr17 82874962 82875183 -2563297 - AluSg/x SINE Alu -5 307 89 26 0 0 0 chr17 82875452 82875478 -2563002 + AT_rich Low_complexity Low_complexity 1 26 0 222 37 0 0 chr17 82875506 82875533 -2562947 + (T)n Simple_repeat Simple_repeat 1 27 0 694 53 84 0 chr17 82875549 82875644 -2562836 - L1PA10 LINE L1 -13 6155 6053 2441 94 7 0 chr17 82875670 82875979 -2562501 - AluSx SINE Alu -1 311 1 183 80 0 0 chr17 82876489 82876514 -2561966 + (GAA)n Simple_repeat Simple_repeat 1 25 0 2024 147 13 0 chr17 82876922 82877222 -2561258 + AluJb SINE Alu 1 304 -8 2707 49 0 0 chr17 82878883 82879189 -2559291 + AluY SINE Alu 1 306 -5 714 123 90 0 chr17 82880147 82880269 -2558211 + FLAM_C SINE Alu 1 133 0 363 184 59 20 chr17 82881774 82881926 -2556554 + (TG)n Simple_repeat Simple_repeat 2 159 0 279 176 22 33 chr17 82881945 82882036 -2556444 + (TG)n Simple_repeat Simple_repeat 2 91 0 2341 93 3 6 chr17 82885180 82885491 -2552989 - AluSg SINE Alu 0 310 1 569 121 0 0 chr17 82885491 82885574 -2552906 - AluSc SINE Alu -225 84 2 228 196 98 0 chr17 82887139 82887190 -2551290 + MER5B DNA MER1_type 88 143 -35 2405 93 10 0 chr17 82887201 82887503 -2550977 + AluSx SINE Alu 1 305 -7 599 218 56 0 chr17 82887561 82887703 -2550777 - MER5A DNA MER1_type -7 182 33 480 173 0 0 chr17 82888328 82888403 -2550077 - AluJ/FLAM SINE Alu -236 76 2 2221 65 58 7 chr17 82888798 82889091 -2549389 + AluSp SINE Alu 1 308 -5 1835 150 38 7 chr17 82889531 82889627 -2548853 + AluSx SINE Alu 1 93 -219 2201 136 0 7 chr17 82889627 82889935 -2548545 + AluSg SINE Alu 1 306 -4 1835 150 38 7 chr17 82889935 82890125 -2548355 + AluSx SINE Alu 93 296 -16 266 216 0 0 chr17 82890173 82890224 -2548256 + L2 LINE L2 3221 3271 -1 2325 102 10 0 chr17 82890998 82891301 -2547179 - AluSq SINE Alu -7 306 1 1248 101 0 0 chr17 82891810 82891969 -2546511 + AluSc SINE Alu 148 306 -3 1392 167 55 82 chr17 82892010 82892411 -2546069 - MLT1B LTR MaLR 0 390 1 351 301 66 16 chr17 82892640 82892823 -2545657 - L1MC4a LINE L1 -1886 5922 5731 2350 78 0 10 chr17 82892850 82893145 -2545335 + AluSx SINE Alu 1 292 -20 1043 104 7 0 chr17 82893247 82893382 -2545098 - AluSq/x SINE Alu -176 137 2 792 257 40 0 chr17 82893567 82893769 -2544711 - Charlie7 DNA MER1_type -2180 432 223 1686 169 23 23 chr17 82894287 82894589 -2543891 - AluJo SINE Alu -10 302 1 1782 134 22 7 chr17 82894634 82894909 -2543571 - AluSq SINE Alu -24 289 11 2440 94 0 3 chr17 82894996 82895305 -2543175 - AluSg SINE Alu -2 308 1 434 351 34 8 chr17 82895674 82895936 -2542544 + L1ME3A LINE L1 5584 5852 -318 2241 91 11 3 chr17 82896211 82896498 -2541982 + AluSg SINE Alu 1 289 -21 617 264 44 0 chr17 82896560 82896742 -2541738 + MER58A DNA MER1_type 33 222 -2 837 161 0 8 chr17 82897392 82897522 -2540958 - AluJo SINE Alu -178 134 6 1687 183 35 0 chr17 82898024 82898308 -2540172 - AluJo SINE Alu -18 294 1 1926 158 0 26 chr17 82898318 82898629 -2539851 - AluJo SINE Alu -9 303 1 307 24 0 24 chr17 82899798 82899840 -2538640 - AluSq SINE Alu -16 284 244 1088 130 74 0 chr17 82899840 82900002 -2538478 - AluSq SINE Alu -139 174 1 332 285 55 77 chr17 82901439 82901674 -2536806 - L1MEc LINE L1 -4048 2348 2119 727 158 75 0 chr17 82901698 82901831 -2536649 - AluJb SINE Alu -22 290 148 2401 89 0 32 chr17 82904512 82904828 -2533652 + AluSx SINE Alu 1 306 -6 306 0 0 0 chr17 82904828 82904862 -2533618 + (TA)n Simple_repeat Simple_repeat 2 35 0 1372 162 100 0 chr17 82905045 82905312 -2533168 - AluJo SINE Alu 0 321 32 544 206 19 62 chr17 82905331 82905491 -2532989 - L1ME1 LINE L1 -143 6023 5871 983 181 44 37 chr17 82905530 82905562 -2532918 - L1ME1 LINE L1 -272 5892 5862 1559 89 166 8 chr17 82905562 82905821 -2532659 + AluSg SINE Alu 1 300 0 983 181 44 37 chr17 82905821 82906058 -2532422 - L1ME1 LINE L1 -302 5862 5621 26 30 0 0 chr17 82906080 82906113 -2532367 + AT_rich Low_complexity Low_complexity 1 33 0 1946 174 0 13 chr17 82906347 82906657 -2531823 + AluJb SINE Alu 1 306 -6 306 0 0 0 chr17 82907461 82907495 -2530985 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 585 141 121 0 chr17 82907497 82907596 -2530884 - AluJb SINE Alu -193 119 9 867 136 0 84 chr17 82907662 82907817 -2530663 - FLAM_C SINE Alu -1 142 1 2162 128 7 0 chr17 82908266 82908555 -2529925 + AluSg SINE Alu 1 291 -19 588 93 0 12 chr17 82908959 82909197 -2529283 + AluSx SINE Alu 1 309 0 440 369 55 34 chr17 82909229 82909259 -2529221 + L2 LINE L2 2215 2243 -1071 2746 208 18 43 chr17 82909259 82909716 -2528764 - MER82 DNA MER2_type 0 653 186 1612 185 34 17 chr17 82909716 82910014 -2528466 + AluJb SINE Alu 1 303 -9 2746 208 18 43 chr17 82910014 82910173 -2528307 - MER82 DNA MER2_type -467 186 53 2152 92 24 7 chr17 82910173 82910467 -2528013 - AluSg SINE Alu -10 300 2 2746 208 18 43 chr17 82910467 82910518 -2527962 - MER82 DNA MER2_type -600 53 2 440 369 55 34 chr17 82910518 82910923 -2527557 + L2 LINE L2 2243 2659 -655 988 170 11 28 chr17 82911330 82911512 -2526968 - AluJo/FRAM SINE Alu 0 312 134 1909 120 0 25 chr17 82911512 82911787 -2526693 - AluSx SINE Alu -14 298 31 596 138 0 0 chr17 82911787 82911874 -2526606 - AluJ/FLAM SINE Alu -224 88 2 702 45 0 0 chr17 82912974 82913062 -2525418 - MER51B LTR ERV1 -78 299 212 1301 265 92 6 chr17 82913099 82913545 -2524935 + L1ME1 LINE L1 5650 6127 -39 267 31 0 0 chr17 82913817 82913849 -2524631 + (T)n Simple_repeat Simple_repeat 1 32 0 204 286 41 51 chr17 82913863 82913961 -2524519 + L2 LINE L2 3138 3234 -38 1763 195 0 7 chr17 82914032 82914335 -2524145 - AluJo SINE Alu -11 301 1 266 294 81 44 chr17 82914722 82914882 -2523598 + L2 LINE L2 3019 3184 -129 2376 101 0 0 chr17 82915086 82915383 -2523097 - AluSc SINE Alu -12 297 1 603 333 109 44 chr17 82916607 82917247 -2521233 + HAL1 LINE L1 215 896 -1611 1127 180 18 14 chr17 82917364 82917581 -2520899 - MER46A DNA MER2_type -2 234 17 226 295 45 9 chr17 82917724 82917836 -2520644 - L1ME4a LINE L1 -82 6039 5924 2204 102 0 7 chr17 82918106 82918424 -2520056 - AluSx SINE Alu 0 316 1 1748 192 11 0 chr17 82918426 82918713 -2519767 - AluJb SINE Alu -21 291 2 369 288 76 38 chr17 82918739 82918975 -2519505 + L1ME LINE L1 5547 5791 -330 * 457 237 22 15 chr17 82918964 82919099 -2519381 - L1MC4a LINE L1 -1202 6606 6471 308 228 353 11 chr17 82919118 82919302 -2519178 + LTR33 LTR ERVL 8 254 -267 292 314 20 0 chr17 82919368 82919470 -2519010 + LTR33 LTR ERVL 348 451 -70 849 168 0 0 chr17 82919618 82919743 -2518737 - FLAM_C SINE Alu -18 125 1 24 0 0 0 chr17 82919832 82919856 -2518624 + AT_rich Low_complexity Low_complexity 1 24 0 560 260 8 0 chr17 82920172 82920299 -2518181 - MER94 DNA DNA -2 132 5 2230 100 0 0 chr17 82920760 82921059 -2517421 + AluSx SINE Alu 1 299 -13 1310 281 78 22 chr17 82921060 82921523 -2516957 + L2 LINE L2 2413 2901 -413 467 268 125 12 chr17 82921563 82921731 -2516749 + L2 LINE L2 3122 3308 -5 401 247 85 26 chr17 82921817 82922023 -2516457 + L1ME4a LINE L1 5269 5482 -686 495 289 96 0 chr17 82922664 82922820 -2515660 + MIR SINE MIR 90 260 -2 449 248 205 15 chr17 82922847 82923095 -2515385 + L1ME4a LINE L1 5620 5819 -302 234 0 0 0 chr17 82923095 82923121 -2515359 + (TG)n Simple_repeat Simple_repeat 2 27 0 449 248 205 15 chr17 82923121 82923276 -2515204 + L1ME4a LINE L1 5819 6100 -21 1672 181 72 0 chr17 82923540 82923860 -2514620 - MER2 DNA MER2_type -1 343 1 231 36 0 0 chr17 82924528 82924556 -2513924 + (TG)n Simple_repeat Simple_repeat 2 29 0 274 61 41 0 chr17 82924557 82924606 -2513874 + (GA)n Simple_repeat Simple_repeat 2 52 0 283 256 51 0 chr17 82925567 82925645 -2512835 + MER94 DNA DNA 24 105 -29 2189 104 3 0 chr17 82926256 82926563 -2511917 + AluSx SINE Alu 1 308 -4 336 78 22 5 chr17 82926783 82926835 -2511645 - Alu SINE Alu -253 46 1 294 300 136 47 chr17 82926994 82927311 -2511169 + L2 LINE L2 2924 3268 -4 2237 77 30 0 chr17 82927689 82927987 -2510493 - AluSc SINE Alu 0 309 3 386 77 0 0 chr17 82928687 82928739 -2509741 + AluYb8 SINE Alu 157 208 -100 2219 59 7 46 chr17 82928954 82929260 -2509220 - AluY SINE Alu -17 294 1 541 281 115 16 chr17 82929901 82930206 -2508274 - L1MC/D LINE L1 -591 5571 5290 935 140 27 0 chr17 82930233 82930383 -2508097 + FRAM SINE Alu 1 152 -24 2033 118 3 10 chr17 82930942 82931239 -2507241 - AluSq SINE Alu -17 296 2 2321 63 7 3 chr17 82933162 82933461 -2505019 + AluY SINE Alu 1 300 -11 1012 180 13 53 chr17 82934853 82935081 -2503399 + MER20 DNA MER1_type 1 219 0 288 225 25 25 chr17 82935236 82935316 -2503164 + MER5A DNA MER1_type 109 188 -1 21 0 0 0 chr17 82937411 82937432 -2501048 + AT_rich Low_complexity Low_complexity 1 21 0 2115 100 0 10 chr17 82937442 82937741 -2500739 - AluSq SINE Alu -17 296 1 307 263 38 0 chr17 82937781 82937861 -2500619 - MIR SINE MIR -58 150 68 2173 106 0 3 chr17 82938153 82938454 -2500026 - AluSx SINE Alu -10 302 3 313 215 6 49 chr17 82938960 82939052 -2499428 - MIR SINE MIR -85 123 32 217 293 142 0 chr17 82939183 82939289 -2499191 + L2 LINE L2 3152 3272 0 286 269 201 8 chr17 82939358 82939492 -2498988 - MIR SINE MIR -12 250 91 450 0 0 0 chr17 82939933 82939983 -2498497 + (TG)n Simple_repeat Simple_repeat 2 51 0 321 267 213 68 chr17 82941845 82942141 -2496339 - HAL1 LINE L1 0 2507 2169 441 248 119 64 chr17 82942790 82943085 -2495395 - HAL1 LINE L1 -799 1708 1398 239 277 223 30 chr17 82943172 82943540 -2494940 - HAL1 LINE L1 -1350 1157 719 201 39 0 0 chr17 82943636 82943662 -2494818 + (TG)n Simple_repeat Simple_repeat 1 26 0 366 326 0 0 chr17 82943672 82943761 -2494719 - L2 LINE L2 -38 3275 3187 1970 127 0 19 chr17 82943886 82944194 -2494286 - AluSx SINE Alu -10 302 1 30 0 0 0 chr17 82944646 82944676 -2493804 + AT_rich Low_complexity Low_complexity 1 30 0 2148 109 0 28 chr17 82945062 82945384 -2493096 - AluSq SINE Alu 0 313 1 557 170 0 7 chr17 82945508 82945655 -2492825 + CT-rich Low_complexity Low_complexity 1 146 0 1597 159 45 10 chr17 82945655 82945945 -2492535 - AluJb SINE Alu -1 311 12 576 212 195 45 chr17 82946257 82946416 -2492064 - MER33 DNA MER1_type -2265 359 225 216 0 0 0 chr17 82946416 82946440 -2492040 + (TG)n Simple_repeat Simple_repeat 2 25 0 576 212 195 45 chr17 82946440 82946451 -2492029 - MER33 DNA MER1_type -2399 225 217 2145 82 0 0 chr17 82946451 82946778 -2491702 - AluY SINE Alu 0 327 1 576 212 195 45 chr17 82946778 82946880 -2491600 - MER33 DNA MER1_type -2407 217 1 484 350 51 25 chr17 82946975 82947212 -2491268 - MIR SINE MIR 0 262 20 328 218 173 15 chr17 82947367 82947500 -2490980 - L1ME4a LINE L1 -2 6119 5966 221 220 0 51 chr17 82947649 82947708 -2490772 - MIR SINE MIR -130 132 77 365 265 44 77 chr17 82948218 82948399 -2490081 - MIR3 SINE MIR -44 164 8 357 290 72 39 chr17 82948411 82948592 -2489888 + MIR3 SINE MIR 4 185 -66 270 316 123 0 chr17 82949234 82949348 -2489132 + L2 LINE L2 3186 3313 0 192 179 0 0 chr17 82949370 82949409 -2489071 + T-rich Low_complexity Low_complexity 2 40 0 2486 47 0 0 chr17 82949780 82950076 -2488404 + AluSc SINE Alu 1 296 -13 1799 215 128 40 chr17 82950692 82951631 -2486849 + L1ME2 LINE L1 5129 6163 -1 463 234 80 7 chr17 82951647 82951784 -2486696 - L1ME4a LINE L1 -2 6119 5973 1641 200 0 3 chr17 82952939 82953244 -2485236 + AluJo SINE Alu 3 306 -6 352 339 9 0 chr17 82953397 82953509 -2484971 - MER5B DNA MER1_type 0 178 66 220 259 25 37 chr17 82953525 82953606 -2484874 + MER5A DNA MER1_type 45 124 -65 210 233 167 0 chr17 82953633 82953693 -2484787 - MER5A DNA MER1_type -113 76 7 2384 230 33 5 chr17 82953750 82954323 -2484157 + L1MB8 LINE L1 5579 6167 -11 1708 105 4 0 chr17 82954323 82954562 -2483918 - AluSg/x SINE Alu -5 307 68 2239 92 3 3 chr17 82955776 82956080 -2482400 + AluSx SINE Alu 1 304 -8 481 253 96 91 chr17 82956360 82956514 -2481966 + L1ME4a LINE L1 5679 5831 -290 1616 152 3 36 chr17 82956514 82956817 -2481663 + AluJo SINE Alu 9 301 -11 481 253 96 91 chr17 82956817 82957101 -2481379 + L1ME4a LINE L1 5831 6119 -2 232 322 78 0 chr17 82957121 82957211 -2481269 - L1ME4a LINE L1 -1898 5910 5814 2098 108 3 0 chr17 82957220 82957516 -2480964 - AluSg SINE Alu -13 297 1 267 294 157 0 chr17 82958053 82958155 -2480325 + L2 LINE L2 3154 3271 -1 423 173 0 0 chr17 82958386 82958467 -2480013 + (TG)n Simple_repeat Simple_repeat 1 81 0 186 43 0 0 chr17 82958974 82958997 -2479483 + (T)n Simple_repeat Simple_repeat 1 23 0 489 243 29 0 chr17 82959803 82959906 -2478574 + U6 snRNA snRNA 1 106 -1 237 309 21 0 chr17 82960081 82960178 -2478302 + (TATATG)n Simple_repeat Simple_repeat 4 102 0 512 119 0 0 chr17 82962949 82963033 -2475447 - AluS SINE Alu 0 309 226 500 103 0 0 chr17 82963133 82963201 -2475279 + Alu SINE Alu 227 294 -17 335 302 24 35 chr17 82963202 82963371 -2475109 + L1MC5 LINE L1 7700 7866 -95 1795 161 43 0 chr17 82963523 82963822 -2474658 - AluJo SINE Alu 0 312 1 1819 147 3 3 chr17 82968017 82968309 -2470171 - AluSx SINE Alu -20 292 1 2145 99 3 10 chr17 82968809 82969123 -2469357 + AluSx SINE Alu 1 312 0 2280 64 0 22 chr17 82969182 82969494 -2468986 + AluY SINE Alu 1 305 -6 1709 167 7 14 chr17 82969558 82969846 -2468634 - AluJo SINE Alu -26 286 1 21 36 0 0 chr17 82969855 82969883 -2468597 + AT_rich Low_complexity Low_complexity 1 28 0 847 96 26 0 chr17 82969886 82970001 -2468479 - AluJb SINE Alu -194 118 1 2385 96 3 10 chr17 82970399 82970713 -2467767 + AluSx SINE Alu 1 312 0 1990 161 0 16 chr17 82970731 82971048 -2467432 + AluSq SINE Alu 1 312 -1 1321 111 0 6 chr17 82971048 82971228 -2467252 + AluSg/x SINE Alu 134 312 0 2406 103 0 0 chr17 82971775 82972077 -2466403 + AluSx SINE Alu 1 302 -10 184 176 0 0 chr17 82972437 82972471 -2466009 + MIR SINE MIR 216 249 -13 1730 133 4 4 chr17 82972620 82972869 -2465611 - AluSx SINE Alu -8 304 56 3785 156 14 20 chr17 82973589 82974248 -2464232 - L1PA16 LINE L1 -21 6145 5489 2261 111 0 16 chr17 82974248 82974563 -2463917 - AluY SINE Alu -1 310 1 3785 156 14 20 chr17 82974563 82974591 -2463889 - L1PA16 LINE L1 -677 5489 5462 464 265 18 35 chr17 82974881 82975051 -2463429 - MIR SINE MIR -74 188 22 960 180 0 0 chr17 82975120 82975270 -2463210 - AluJo SINE Alu -30 282 133 678 168 19 6 chr17 82975279 82975440 -2463040 + CT-rich Low_complexity Low_complexity 4 166 0 729 161 0 0 chr17 82975441 82975553 -2462927 - AluJo SINE Alu -189 123 12 1405 178 44 20 chr17 82975770 82975791 -2462689 + L1MB3 LINE L1 5813 5832 -351 2203 115 13 7 chr17 82975791 82976095 -2462385 + AluSx SINE Alu 1 306 -6 1405 178 44 20 chr17 82976095 82976366 -2462114 + L1MB3 LINE L1 5832 6112 -71 2444 84 3 0 chr17 82976366 82976664 -2461816 + AluSp SINE Alu 3 301 -12 1244 119 0 0 chr17 82976664 82976832 -2461648 + AluSg/x SINE Alu 132 299 -11 2219 198 82 36 chr17 82977448 82978000 -2460480 + L1MB8 LINE L1 5542 6118 -60 2132 122 20 0 chr17 82978000 82978294 -2460186 + AluSx SINE Alu 1 300 -12 2575 62 0 13 chr17 82978613 82978920 -2459560 - AluY SINE Alu -8 303 1 2112 140 0 0 chr17 82979051 82979344 -2459136 - AluSx SINE Alu -19 293 1 738 198 36 36 chr17 82979458 82979625 -2458855 - MER3 DNA MER1_type -28 181 15 838 194 73 24 chr17 82979632 82979838 -2458642 + MER20 DNA MER1_type 1 216 -3 1929 139 36 17 chr17 82979933 82980235 -2458245 + AluJo SINE Alu 1 308 -4 1847 154 38 50 chr17 82980257 82980323 -2458157 + L1MB3 LINE L1 5767 5832 -351 2326 109 0 13 chr17 82980323 82980634 -2457846 + AluSx SINE Alu 1 307 -5 1847 154 38 50 chr17 82980634 82980930 -2457550 + L1MB3 LINE L1 5832 6127 -56 2395 78 0 0 chr17 82980930 82981249 -2457231 + AluSx SINE Alu 1 319 0 1847 154 38 50 chr17 82981249 82981305 -2457175 + L1MB3 LINE L1 6127 6182 -1 2159 142 3 0 chr17 82981967 82982278 -2456202 + AluSx SINE Alu 1 312 0 2405 72 7 0 chr17 82982362 82982655 -2455825 + AluY SINE Alu 2 296 -15 524 157 0 0 chr17 82982877 82982960 -2455520 - AluJ/FLAM SINE Alu -228 84 2 1944 103 4 8 chr17 82983497 82983758 -2454722 - AluSq SINE Alu -10 303 44 1927 143 38 0 chr17 82983974 82984261 -2454219 - AluJb SINE Alu -12 300 3 1453 126 0 23 chr17 82985246 82985415 -2453065 - AluSg/x SINE Alu -10 302 138 2171 135 0 0 chr17 82985415 82985711 -2452769 - AluSx SINE Alu -16 296 1 1453 126 0 23 chr17 82985711 82985755 -2452725 - AluSg/x SINE Alu -174 138 94 1034 151 236 4 chr17 83035755 83035980 -2402500 - AluJo SINE Alu -34 278 2 257 307 28 34 chr17 83036045 83036221 -2402259 - L1 LINE L1 -867 5279 5105 243 261 18 109 chr17 83036534 83036699 -2401781 - MER69A DNA AcHobo -24 153 4 837 198 3 14 chr17 83036945 83037292 -2401188 + (CACCAT)n Simple_repeat Simple_repeat 1 343 0 276 182 0 0 chr17 83037293 83037337 -2401143 + (CAT)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr17 83037790 83037811 -2400669 + AT_rich Low_complexity Low_complexity 1 21 0 403 98 0 0 chr17 83038366 83038427 -2400053 - MER53 DNA DNA -7 182 122 270 0 0 0 chr17 83038427 83038457 -2400023 + (T)n Simple_repeat Simple_repeat 1 30 0 2323 119 0 0 chr17 83038474 83038785 -2399695 + AluSx SINE Alu 1 311 -1 352 163 120 0 chr17 83038788 83038880 -2399600 + MER53 DNA DNA 87 189 0 607 90 0 3 chr17 83039280 83039502 -2398978 - AluY SINE Alu -14 297 1 2143 82 4 4 chr17 83039515 83039785 -2398695 - AluY SINE Alu -17 294 25 329 305 59 0 chr17 83039882 83040000 -2398480 + MIR SINE MIR 20 144 -118 2168 107 6 64 chr17 83040208 83040536 -2397944 - AluSx SINE Alu -3 309 1 722 195 54 70 chr17 83040933 83041174 -2397306 - L1ME2 LINE L1 -243 5921 5685 1079 210 13 0 chr17 83041351 83041575 -2396905 - MLT1D LTR MaLR -2 503 277 370 111 0 0 chr17 83041577 83041631 -2396849 - MLT2B1 LTR ERVL 0 554 501 281 222 0 11 chr17 83041640 83041730 -2396750 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 1697 203 118 9 chr17 83041784 83042217 -2396263 - MLT2B1 LTR ERVL -39 481 2 254 192 121 50 chr17 83042217 83042311 -2396169 - MLT1D LTR MaLR -225 280 180 515 262 40 16 chr17 83043133 83043383 -2395097 - MER5C DNA MER1_type -2 322 8 4777 124 18 4 chr17 83043442 83044184 -2394296 - L1PA14 LINE L1 -100 6061 5310 191 252 29 58 chr17 83044189 83044292 -2394188 - L2 LINE L2 -129 3184 3085 2203 122 3 0 chr17 83044400 83044694 -2393786 - AluSx SINE Alu -17 295 1 439 184 0 18 chr17 83044988 83045097 -2393383 + (TGGA)n Simple_repeat Simple_repeat 3 109 0 2373 116 0 0 chr17 83045815 83046118 -2392362 - AluSq SINE Alu -10 303 1 189 0 0 0 chr17 83046785 83046806 -2391674 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 1990 126 0 11 chr17 83046810 83046952 -2391528 - AluSx SINE Alu -37 275 136 2869 23 0 0 chr17 83046952 83047260 -2391220 - AluYb8 SINE Alu -10 308 1 1990 126 0 11 chr17 83047260 83047395 -2391085 - AluSx SINE Alu -176 136 1 2602 49 3 0 chr17 83048191 83048495 -2389985 + AluY SINE Alu 1 305 -6 1293 231 46 30 chr17 83049027 83049395 -2389085 - MLT1A2 LTR MaLR 0 374 1 216 179 0 0 chr17 83049618 83049657 -2388823 + (TATG)n Simple_repeat Simple_repeat 4 42 0 951 155 0 14 chr17 83049678 83049826 -2388654 - AluJb SINE Alu -12 300 155 421 200 0 0 chr17 83049854 83049929 -2388551 - AluJ/FLAM SINE Alu -237 75 1 310 161 0 16 chr17 83049934 83049996 -2388484 - MER116 DNA Mariner -18 62 2 2107 147 3 0 chr17 83050327 83050626 -2387854 + AluSx SINE Alu 1 300 -12 286 330 106 12 chr17 83050836 83051200 -2387280 - HAL1b LINE L1 -625 1734 309 2337 110 0 0 chr17 83051321 83051621 -2386859 - AluSx SINE Alu -12 300 1 2618 63 0 0 chr17 83051906 83052207 -2386273 - AluY SINE Alu -10 301 1 838 213 36 94 chr17 83052791 83053068 -2385412 + MLT1A2 LTR MaLR 1 261 -113 2001 176 24 0 chr17 83054073 83054454 -2384026 + MLT1B LTR MaLR 1 390 0 230 348 44 0 chr17 83054504 83054639 -2383841 + HAL1b LINE L1 509 649 -699 1034 113 0 0 chr17 83054640 83054773 -2383707 + AluSq/x SINE Alu 1 133 -180 2234 120 0 3 chr17 83055385 83055685 -2382795 + AluSg SINE Alu 1 299 -11 2288 131 36 68 chr17 83056598 83056993 -2381487 + MSTA LTR MaLR 1 382 -46 2169 108 0 0 chr17 83056993 83057270 -2381210 - AluSx SINE Alu 0 312 36 2288 131 36 68 chr17 83057270 83057316 -2381164 + MSTA LTR MaLR 382 428 0 262 167 19 0 chr17 83057487 83057541 -2380939 + MADE1 DNA Mariner 2 56 -24 814 167 0 0 chr17 83057666 83057798 -2380682 - FLAM_C SINE Alu -1 132 1 561 189 0 0 chr17 83057897 83057992 -2380488 + AluSq/x SINE Alu 37 131 -181 1575 300 84 52 chr17 83058092 83059440 -2379040 + L2 LINE L2 1926 3313 0 420 202 22 0 chr17 83060266 83060355 -2378125 + MER89 LTR ERV1 5 95 -464 1541 150 0 114 chr17 83061506 83061839 -2376641 + AluJb SINE Alu 1 295 -7 311 95 0 0 chr17 83062729 83062771 -2375709 + AluJ/FLAM SINE Alu 18 59 -243 296 266 186 0 chr17 83063903 83064016 -2374464 - L2 LINE L2 -15 3298 3165 1329 199 45 19 chr17 83064181 83064493 -2373987 + MER31A LTR ERV1 159 478 -7 236 152 65 0 chr17 83064830 83064876 -2373604 + Alu SINE Alu 88 136 -166 2177 106 14 0 chr17 83064876 83065204 -2373276 + AluSq SINE Alu 1 332 0 1009 170 87 10 chr17 83065218 83065424 -2373056 + MLT1A1 LTR MaLR 144 365 0 859 175 7 7 chr17 83067800 83067954 -2370526 - FRAM SINE Alu -12 154 1 2557 75 0 0 chr17 83069782 83070090 -2368390 + AluSc SINE Alu 1 308 -1 200 111 83 0 chr17 83071811 83071847 -2366633 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 197 259 17 35 chr17 83072261 83072319 -2366161 - MIR SINE MIR -1 261 205 282 270 0 0 chr17 83072319 83072408 -2366072 - L1MC4 LINE L1 -1340 6702 6614 374 100 17 0 chr17 83072408 83072468 -2366012 + (TA)n Simple_repeat Simple_repeat 1 61 0 2234 105 0 0 chr17 83072471 83072775 -2365705 - AluSx SINE Alu -8 304 1 402 242 0 0 chr17 83072775 83072870 -2365610 - MIR SINE MIR -51 211 117 1592 238 44 54 chr17 83072925 83073414 -2365066 + MER54A LTR ERVL 16 712 -189 287 235 0 15 chr17 83073423 83073491 -2364989 - MIR SINE MIR -59 203 137 * 527 255 13 13 chr17 83073478 83073627 -2364853 + MIR SINE MIR 114 262 0 544 253 84 17 chr17 83073686 83073864 -2364616 - Tigger8 DNA MER2_type -97 569 380 918 106 0 14 chr17 83073865 83074007 -2364473 + AluSp/q SINE Alu 174 313 0 1003 113 0 7 chr17 83074018 83074160 -2364320 + AluSg SINE Alu 1 141 -169 867 157 46 0 chr17 83074160 83074313 -2364167 + MER54A LTR ERVL 718 877 -24 832 211 48 4 chr17 83074752 83075074 -2363406 - MER89 LTR ERV1 -2 557 197 304 215 0 13 chr17 83075048 83075127 -2363353 - MER89 LTR ERV1 -472 87 10 * 2099 113 3 3 chr17 83075131 83075432 -2363048 - AluSp SINE Alu -12 301 1 967 170 36 27 chr17 83076229 83076452 -2362028 + MER96B DNA MER1_type? 175 399 -18 301 272 117 0 chr17 83076589 83076692 -2361788 - L2 LINE L2 0 3313 3199 1794 156 0 14 chr17 83077542 83077864 -2360616 + AluJb SINE Alu 1 318 0 186 167 0 0 chr17 83077956 83077992 -2360488 + C-rich Low_complexity Low_complexity 1 36 0 440 309 38 38 chr17 83078009 83078124 -2360356 - L1MEc LINE L1 -4139 2257 2140 2275 99 0 0 chr17 83078124 83078426 -2360054 - AluSp SINE Alu -11 302 1 440 309 38 38 chr17 83078426 83078520 -2359960 - L1MEc LINE L1 -4255 2141 2048 2053 94 29 0 chr17 83079066 83079341 -2359139 + AluSx SINE Alu 24 306 -6 896 258 197 12 chr17 83079647 83080041 -2358439 - Charlie7 DNA MER1_type -427 2185 1705 378 0 0 0 chr17 83080041 83080083 -2358397 + (TG)n Simple_repeat Simple_repeat 2 43 0 896 258 197 12 chr17 83080083 83080114 -2358366 - Charlie7 DNA MER1_type -907 1705 1681 1201 219 0 85 chr17 83080114 83080377 -2358103 + L1M4 LINE L1 4455 4682 -1464 2500 45 0 25 chr17 83080377 83080691 -2357789 + AluY SINE Alu 6 311 0 1201 219 0 85 chr17 83080691 83080779 -2357701 + L1M4 LINE L1 4682 4776 -1370 1893 97 28 123 chr17 83080780 83081170 -2357310 + LTR8 LTR ERV1 2 354 -337 579 194 31 23 chr17 83081401 83081530 -2356950 - MER4B LTR ERV1 -111 499 370 260 318 95 28 chr17 83081872 83082083 -2356397 - L2 LINE L2 -1553 1761 1537 873 218 47 5 chr17 83082107 83082300 -2356180 + MER58A DNA MER1_type 24 224 0 919 173 7 0 chr17 83082553 83082703 -2355777 + AluJb SINE Alu 143 293 -19 835 169 33 22 chr17 83082910 83083094 -2355386 + LTR64 LTR ERVK 7 192 -366 333 194 69 0 chr17 83083095 83083167 -2355313 + AluS SINE Alu 1 77 -223 1991 92 4 7 chr17 83083208 83083479 -2355001 + AluSp SINE Alu 38 307 -6 678 177 43 21 chr17 83083532 83083673 -2354807 - MER4D LTR ERV1 0 903 760 2438 124 18 88 chr17 83083705 83084206 -2354274 - MER4B LTR ERV1 -36 574 109 400 94 0 0 chr17 83084212 83084265 -2354215 + FLAM SINE Alu 74 126 -17 665 83 10 0 chr17 83084400 83084496 -2353984 - MER4B LTR ERV1 -513 97 1 * 3655 167 24 54 chr17 83084496 83084937 -2353543 - MER4D LTR ERV1 -142 761 308 2141 85 3 0 chr17 83084937 83085219 -2353261 + AluSx SINE Alu 17 299 -13 3655 167 24 54 chr17 83085219 83085394 -2353086 - MER4D LTR ERV1 -595 308 171 1756 92 0 0 chr17 83085394 83085634 -2352846 + AluY SINE Alu 71 310 -1 3655 167 24 54 chr17 83085634 83085798 -2352682 - MER4D LTR ERV1 -732 171 4 799 209 46 10 chr17 83085798 83086040 -2352440 + LTR64 LTR ERVK 237 551 -7 2249 76 13 3 chr17 83086114 83086417 -2352063 - AluSx SINE Alu -6 306 1 1688 166 60 30 chr17 83086844 83086950 -2351530 + MLT1B LTR MaLR 1 102 -288 1908 147 3 3 chr17 83086950 83087249 -2351231 + AluSx SINE Alu 1 299 -13 1688 166 60 30 chr17 83087249 83087474 -2351006 + MLT1B LTR MaLR 102 342 -48 360 279 76 29 chr17 83087784 83087842 -2350638 - MER5A DNA MER1_type -6 183 129 1934 123 0 49 chr17 83087842 83088166 -2350314 + AluJb SINE Alu 1 308 -4 360 279 76 29 chr17 83088166 83088279 -2350201 - MER5A DNA MER1_type -60 129 4 448 177 149 14 chr17 83089412 83089553 -2348927 + MER96B DNA MER1_type? 20 179 -238 1523 145 0 0 chr17 83091184 83091411 -2347069 - AluJo SINE Alu -32 280 54 1342 195 73 60 chr17 83091411 83091838 -2346642 + L1MB3 LINE L1 4175 4595 -1588 2403 66 0 3 chr17 83091838 83092141 -2346339 + AluY SINE Alu 1 302 -9 1342 195 73 60 chr17 83092141 83092986 -2345494 + L1MB3 LINE L1 4595 5917 -266 1342 144 58 27 chr17 83092986 83093084 -2345396 + L1MB3 LINE L1 5919 6012 -171 3905 78 59 0 chr17 83093084 83093606 -2344874 + MER41A LTR ERV1 2 554 0 1342 144 58 27 chr17 83093606 83093764 -2344716 + L1MB3 LINE L1 6012 6183 0 1342 195 73 60 chr17 83093764 83094035 -2344445 + L1MB3 LINE L1 5917 6183 0 309 217 250 0 chr17 83094641 83094793 -2343687 + LTR33A LTR ERVL 255 444 -79 840 230 166 51 chr17 83094855 83095246 -2343234 - MLT1D LTR MaLR -6 499 64 * 1021 238 72 14 chr17 83095244 83095369 -2343111 + MLT1A2 LTR MaLR 33 149 -225 1912 134 0 38 chr17 83095369 83095689 -2342791 + AluSx SINE Alu 1 308 -4 1021 238 72 14 chr17 83095689 83095853 -2342627 + MLT1A2 LTR MaLR 149 339 -35 1544 196 160 31 chr17 83095860 83096310 -2342170 + MLT2B1 LTR ERVL 5 512 -8 1958 120 28 3 chr17 83096490 83096773 -2341707 + AluSg SINE Alu 1 290 -20 414 288 12 37 chr17 83096903 83097020 -2341460 - MLT1J LTR MaLR -237 199 99 2386 153 13 71 chr17 83097020 83097221 -2341259 + MSTB LTR MaLR 1 212 -214 2026 148 0 0 chr17 83097221 83097532 -2340948 + AluSx SINE Alu 1 311 -1 2386 153 13 71 chr17 83097532 83097782 -2340698 + MSTB LTR MaLR 212 426 0 414 288 12 37 chr17 83097782 83097830 -2340650 - MLT1J LTR MaLR -337 99 51 223 294 178 62 chr17 83097915 83098266 -2340214 + L2 LINE L2 2311 2620 -694 1941 119 16 31 chr17 83098266 83098584 -2339896 + AluSq SINE Alu 1 313 0 223 294 178 62 chr17 83098584 83098799 -2339681 + L2 LINE L2 2620 2943 -371 267 308 0 0 chr17 83098800 83098865 -2339615 + (CA)n Simple_repeat Simple_repeat 1 65 0 296 299 26 0 chr17 83099145 83099222 -2339258 - MER103 DNA DNA -85 81 3 1960 133 23 7 chr17 83099250 83099271 -2339209 - AluSx SINE Alu -5 307 288 204 97 0 0 chr17 83099271 83099302 -2339178 + (TG)n Simple_repeat Simple_repeat 2 32 0 1960 133 23 7 chr17 83099302 83099582 -2338898 - AluSx SINE Alu -24 288 1 2083 173 37 3 chr17 83099582 83099963 -2338517 + MER57A LTR ERV1 1 394 -9 1457 201 33 20 chr17 83100084 83100485 -2337995 + MER61B LTR ERV1 1 1308 0 767 151 69 19 chr17 83100856 83101015 -2337465 + MER4A LTR ERV1 1 167 -497 324 164 289 19 chr17 83101011 83101115 -2337365 + MER4C LTR ERV1 303 434 -31 * 1086 171 95 71 chr17 83101254 83101530 -2336950 + MER4A LTR ERV1 157 306 -159 2003 149 0 13 chr17 83101530 83101845 -2336635 + AluSx SINE Alu 1 311 -1 1086 171 95 71 chr17 83101845 83102009 -2336471 + MER4A LTR ERV1 306 465 0 958 198 154 56 chr17 83102785 83103128 -2335352 - MER31B LTR ERV1 -50 435 46 2294 87 3 0 chr17 83103128 83103426 -2335054 + AluSx SINE Alu 1 299 -13 958 198 154 56 chr17 83103426 83103477 -2335003 - MER31B LTR ERV1 -439 46 1 541 223 178 0 chr17 83103940 83104097 -2334383 + MER5A DNA MER1_type 5 189 0 1122 197 48 22 chr17 83104192 83104461 -2334019 - AluJo SINE Alu -36 276 1 600 212 0 51 chr17 83104463 83104600 -2333880 - AluJo/FLAM SINE Alu -172 130 1 2092 98 13 31 chr17 83105333 83105344 -2333136 - AluSq SINE Alu -2 311 301 270 0 0 0 chr17 83105344 83105374 -2333106 + (TA)n Simple_repeat Simple_repeat 2 31 0 2092 98 13 31 chr17 83105374 83105679 -2332801 - AluSq SINE Alu -12 301 1 302 350 58 71 chr17 83106517 83106811 -2331669 - L2 LINE L2 -27 3245 2956 285 280 27 0 chr17 83107253 83107328 -2331152 - MER81 DNA DNA -37 77 1 2164 127 0 0 chr17 83107593 83107901 -2330579 - AluSg1 SINE Alu -1 308 1 2258 90 13 7 chr17 83108685 83108995 -2329485 - AluSq SINE Alu -1 312 1 322 232 105 21 chr17 83109021 83109116 -2329364 - MIR SINE MIR -113 149 47 2370 61 3 13 chr17 83109648 83109958 -2328522 - AluY SINE Alu -4 307 1 1214 172 0 18 chr17 83110164 83110385 -2328095 - AluJb SINE Alu -23 289 73 2165 85 0 42 chr17 83110388 83110694 -2327786 - AluSc SINE Alu -16 293 1 245 314 0 0 chr17 83111297 83111367 -2327113 + (TG)n Simple_repeat Simple_repeat 1 70 0 188 313 40 10 chr17 83111406 83111505 -2326975 - L2 LINE L2 -190 3082 2981 965 188 82 102 chr17 83112620 83112866 -2325614 - MER74B LTR ERVL -280 342 101 2073 118 0 3 chr17 83112866 83113163 -2325317 + AluSx SINE Alu 1 296 -16 965 188 82 102 chr17 83113163 83113209 -2325271 - MER74B LTR ERVL -521 101 56 401 231 19 48 chr17 83113213 83113317 -2325163 + MLT1K LTR MaLR 477 577 -11 374 266 96 35 chr17 83113320 83113519 -2324961 + L2 LINE L2 2846 3056 -216 1303 107 81 0 chr17 83113796 83113993 -2324487 + 7SLRNA srpRNA srpRNA 1 213 -107 2425 158 72 44 chr17 83114457 83114981 -2323499 - MER74A LTR ERVL 0 558 20 2108 219 24 26 chr17 83114983 83115214 -2323266 + L1M2 LINE L1 2830 3060 -3788 2359 76 3 0 chr17 83115214 83115516 -2322964 + AluY SINE Alu 1 303 -8 2108 219 24 26 chr17 83115516 83115837 -2322643 + L1M2 LINE L1 3060 3381 -3467 1604 121 40 11 chr17 83117635 83117908 -2320572 + AluSx SINE Alu 24 304 -8 1170 156 28 9 chr17 83118380 83118592 -2319888 + AluJo SINE Alu 85 300 -12 21 26 0 26 chr17 83118746 83118773 -2319707 + AT_rich Low_complexity Low_complexity 1 28 -10 1904 163 0 0 chr17 83118773 83119074 -2319406 + AluSx SINE Alu 1 301 -11 21 26 0 26 chr17 83119074 83119085 -2319395 + AT_rich Low_complexity Low_complexity 28 38 0 619 234 126 79 chr17 83119151 83119429 -2319051 + L1MD2 LINE L1 5929 6219 -140 252 116 0 0 chr17 83119447 83119490 -2318990 - Alu SINE Alu -1 301 259 1286 117 0 0 chr17 83119590 83119770 -2318710 + AluSg/x SINE Alu 116 295 -15 248 139 0 3 chr17 83119772 83119825 -2318655 + L1MB3 LINE L1 6129 6180 0 21 0 0 0 chr17 83120141 83120162 -2318318 + AT_rich Low_complexity Low_complexity 1 21 0 950 172 0 22 chr17 83120579 83120759 -2317721 - FRAM SINE Alu 0 176 1 182 83 0 111 chr17 83121319 83121391 -2317089 + (TTAGGG)n Simple_repeat Simple_repeat 1 64 0 2561 49 0 0 chr17 83122329 83122636 -2315844 + AluY SINE Alu 1 307 -4 258 357 24 0 chr17 83126127 83126211 -2312269 + MIR SINE MIR 16 101 -161 253 296 292 4 chr17 83126210 83126436 -2312044 - L2 LINE L2 -10 3303 3013 * 2159 107 7 7 chr17 83126436 83126744 -2311736 - AluSg SINE Alu -2 308 1 389 262 81 13 chr17 83126770 83126919 -2311561 + MIR SINE MIR 92 250 -12 887 169 6 0 chr17 83126931 83127103 -2311377 + (CACCAT)n Simple_repeat Simple_repeat 5 177 0 258 193 0 0 chr17 83127138 83127195 -2311285 + (CACCAT)n Simple_repeat Simple_repeat 1 57 0 221 220 17 34 chr17 83127216 83127275 -2311205 + (CACCAT)n Simple_repeat Simple_repeat 4 61 0 2210 125 0 0 chr17 83128194 83128499 -2309981 - AluSx SINE Alu -7 305 1 273 208 0 0 chr17 83129074 83129127 -2309353 + MER45 DNA AcHobo 1 53 -125 405 184 0 46 chr17 83129235 83129322 -2309158 + AluJb SINE Alu 212 294 -18 2386 70 0 19 chr17 83129327 83129642 -2308838 + AluY SINE Alu 1 309 -2 210 199 10 171 chr17 83131716 83131843 -2306637 + MIR SINE MIR 12 121 -87 2090 107 4 0 chr17 83132016 83132296 -2306184 + AluSx SINE Alu 14 294 -18 186 133 0 0 chr17 83134155 83134185 -2304295 + (AGGGGG)n Simple_repeat Simple_repeat 5 34 0 237 176 104 128 chr17 83134300 83134425 -2304055 - MER5A DNA MER1_type -67 122 1 2243 85 7 0 chr17 83134615 83134950 -2303530 - AluSp SINE Alu 0 337 1 359 226 0 49 chr17 83135733 83135835 -2302645 + L1MD1 LINE L1 5795 5891 -351 2244 73 0 3 chr17 83135839 83136126 -2302354 + AluY SINE Alu 1 286 -25 1685 168 68 51 chr17 83138644 83138883 -2299597 - MLT1A1 LTR MaLR -3 362 114 2218 128 0 0 chr17 83138883 83139195 -2299285 + AluSx SINE Alu 1 312 0 1685 168 68 51 chr17 83139195 83139307 -2299173 - MLT1A1 LTR MaLR -251 114 5 491 196 47 39 chr17 83139333 83139378 -2299102 - L1MC/D LINE L1 -805 5831 5788 1763 155 0 29 chr17 83139378 83139687 -2298793 - AluJo SINE Alu -2 310 11 491 196 47 39 chr17 83139687 83139820 -2298660 - L1MC/D LINE L1 -848 5788 5650 1705 106 117 8 chr17 83139897 83140162 -2298318 + AluSg1 SINE Alu 1 294 -15 1976 149 0 9 chr17 83140165 83140480 -2298000 + AluJo SINE Alu 1 312 0 2917 234 68 54 chr17 83141178 83141325 -2297155 - L1MC/D LINE L1 -846 5694 5551 2120 117 3 0 chr17 83141325 83141616 -2296864 - AluSx SINE Alu -20 292 1 2917 234 68 54 chr17 83141616 83141900 -2296580 - L1MC/D LINE L1 -989 5551 5273 2196 111 0 0 chr17 83141900 83142197 -2296283 - AluSq SINE Alu -16 297 1 2917 234 68 54 chr17 83142197 83143195 -2295285 - L1MC/D LINE L1 -1267 5273 4243 2203 105 0 7 chr17 83143197 83143493 -2294987 - AluSx SINE Alu -18 294 1 4044 224 64 32 chr17 83143502 83144123 -2294357 - L1MDa LINE L1 -2643 3897 3298 2475 71 0 0 chr17 83144123 83144434 -2294046 - AluY SINE Alu 0 311 1 4044 224 64 32 chr17 83144434 83145463 -2293017 - L1MDa LINE L1 -3242 3298 2194 300 271 37 47 chr17 83145464 83145571 -2292909 - L1MDa LINE L1 -6294 249 144 1985 96 4 0 chr17 83145747 83146008 -2292472 - AluSg SINE Alu -43 267 6 457 154 0 0 chr17 83146012 83146090 -2292390 + MER45A DNA AcHobo 101 178 0 238 204 11 80 chr17 83146405 83146493 -2291987 - MER34 LTR ERV1 -1 541 460 2095 141 0 0 chr17 83146506 83146803 -2291677 + AluSx SINE Alu 4 300 -12 2134 124 76 8 chr17 83146803 83147183 -2291297 - MER4D LTR ERV1 -497 406 1 772 195 50 39 chr17 83147200 83147271 -2291209 - MER34B LTR ERV1 -310 255 186 2202 107 10 7 chr17 83147271 83147579 -2290901 - AluSx SINE Alu -3 309 1 772 195 50 39 chr17 83147579 83147762 -2290718 - MER34B LTR ERV1 -379 186 9 1062 229 77 60 chr17 83148763 83148835 -2289645 - MLT1C LTR MaLR 0 467 398 2091 105 31 0 chr17 83148835 83149121 -2289359 + AluSx SINE Alu 5 299 -13 1062 229 77 60 chr17 83149121 83149502 -2288978 - MLT1C LTR MaLR -69 398 6 262 268 82 0 chr17 83149506 83149603 -2288877 - MIR SINE MIR -98 164 60 2233 111 0 0 chr17 83150027 83150334 -2288146 - AluSx SINE Alu 0 312 6 1160 200 43 126 chr17 83150712 83150821 -2287659 - L1MB7 LINE L1 -5 6179 6063 1461 138 46 92 chr17 83150821 83150973 -2287507 + AluJo SINE Alu 2 135 -167 2166 108 0 3 chr17 83150973 83151269 -2287211 + AluSg SINE Alu 1 295 -15 1461 138 46 92 chr17 83151269 83151420 -2287060 + AluJo SINE Alu 135 291 -11 1160 200 43 126 chr17 83151420 83151630 -2286850 - L1MB7 LINE L1 -121 6063 5919 1994 210 117 8 chr17 83151630 83152116 -2286364 - MER34 LTR ERV1 -1 541 3 1160 200 43 126 chr17 83152116 83152329 -2286151 - L1MB7 LINE L1 -265 5919 5690 274 229 96 0 chr17 83153708 83153791 -2284689 + MIR SINE MIR 54 144 -118 274 229 96 0 chr17 83154004 83154087 -2284393 + MIR SINE MIR 54 144 -118 1133 121 0 6 chr17 83154229 83154394 -2284086 + AluSg/x SINE Alu 135 298 -12 2294 95 3 0 chr17 83154530 83154834 -2283646 - AluSp SINE Alu -4 309 5 1109 71 0 0 chr17 83155498 83155639 -2282841 + AluSg/x SINE Alu 168 308 -2 469 283 41 46 chr17 83155819 83156038 -2282442 + L1MD1 LINE L1 5972 6189 -53 760 121 121 0 chr17 83156057 83156173 -2282307 - FLAM_C SINE Alu -11 132 3 380 139 14 14 chr17 83156173 83156245 -2282235 + L1MD2 LINE L1 6287 6358 -1 2187 113 0 0 chr17 83156667 83156967 -2281513 + AluSq SINE Alu 1 300 -13 2330 92 3 0 chr17 83159255 83159561 -2278919 + AluSq SINE Alu 1 307 -6 182 360 104 48 chr17 83161796 83162046 -2276434 - L2 LINE L2 -4 3268 3005 300 172 0 0 chr17 83162545 83162603 -2275877 + (CCCA)n Simple_repeat Simple_repeat 3 60 0 262 391 114 3 chr17 83162639 83162997 -2275483 - L2 LINE L2 -1100 2214 1817 1486 186 54 26 chr17 83163370 83163757 -2274723 - MLT1C LTR MaLR -17 450 53 1919 143 42 0 chr17 83164594 83164880 -2273600 + AluSx SINE Alu 1 298 -14 592 329 59 0 chr17 83165056 83165275 -2273205 - MIR SINE MIR -21 241 10 299 225 162 40 chr17 83165351 83165524 -2272956 - MLT1K LTR MaLR 0 588 395 239 263 12 50 chr17 83165608 83165688 -2272792 - MLT1K LTR MaLR -212 376 300 242 221 25 66 chr17 83167555 83167677 -2270803 + (CGGGG)n Simple_repeat Simple_repeat 1 117 0 188 348 153 0 chr17 83168038 83168156 -2270324 - L2 LINE L2 -327 2986 2851 2251 97 3 0 chr17 83168293 83168604 -2269876 - AluSx SINE Alu 0 312 1 234 0 0 0 chr17 83168759 83168785 -2269695 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2081 113 0 0 chr17 83168789 83169071 -2269409 - AluSq SINE Alu -31 282 1 1011 207 24 5 chr17 83169204 83169417 -2269063 - L1MB3 LINE L1 -254 5929 5713 853 181 0 0 chr17 83169461 83169594 -2268886 - FLAM_C SINE Alu 0 133 1 2444 84 0 0 chr17 83169621 83169932 -2268548 + AluY SINE Alu 1 311 0 1187 93 0 0 chr17 83169940 83170090 -2268390 + AluSg/x SINE Alu 143 292 -20 917 140 63 43 chr17 83170666 83170873 -2267607 + MER2 DNA MER2_type 1 211 -134 26 0 0 0 chr17 83170877 83170903 -2267577 + AT_rich Low_complexity Low_complexity 1 26 0 1937 125 7 0 chr17 83171016 83171295 -2267185 - AluSq SINE Alu -1 312 32 564 155 10 165 chr17 83172493 83172604 -2265876 - MER96B DNA MER1_type? -4 413 343 9830 40 13 114 chr17 83172604 83174115 -2264365 - SVA Other Other 0 1386 28 348 196 11 22 chr17 83174115 83174207 -2264273 + MER96B DNA MER1_type? 86 176 -241 564 155 10 165 chr17 83174115 83174197 -2264283 - MER96B DNA MER1_type? -74 343 250 2185 114 0 3 chr17 83174501 83174798 -2263682 + AluSx SINE Alu 1 296 -16 186 291 13 13 chr17 83175476 83175627 -2262853 + (TATATG)n Simple_repeat Simple_repeat 4 154 0 198 191 0 0 chr17 83175701 83175743 -2262737 + (TG)n Simple_repeat Simple_repeat 2 43 0 224 351 80 20 chr17 83175755 83175906 -2262574 - MIR SINE MIR -16 246 87 1222 169 0 5 chr17 83176888 83177089 -2261391 - AluJo SINE Alu -27 285 86 337 280 21 0 chr17 83177745 83177838 -2260642 + MER5A DNA MER1_type 7 101 -88 366 290 0 0 chr17 83178609 83178747 -2259733 + (CA)n Simple_repeat Simple_repeat 2 139 0 340 284 28 0 chr17 83179690 83179799 -2258681 + MIR SINE MIR 8 119 -143 259 191 11 101 chr17 83180867 83180956 -2257524 - Charlie5 DNA MER1_type 0 2623 2543 1221 120 10 45 chr17 83180959 83181102 -2257378 + AluSx SINE Alu 1 137 -175 2257 96 7 0 chr17 83181102 83181404 -2257076 + AluSq SINE Alu 1 304 -9 1221 120 10 45 chr17 83181404 83181460 -2257020 + AluSx SINE Alu 137 193 -119 297 125 0 0 chr17 83181460 83181508 -2256972 + AluJb SINE Alu 78 125 -177 410 200 138 21 chr17 83181515 83181660 -2256820 - Charlie5 DNA MER1_type -60 2552 2352 2125 101 0 0 chr17 83181766 83182043 -2256437 - AluSx SINE Alu -35 277 1 2241 110 3 0 chr17 83182805 83183114 -2255366 - AluSx SINE Alu -2 310 1 2036 101 7 10 chr17 83183505 83183801 -2254679 + AluSx SINE Alu 1 295 -17 2027 138 0 0 chr17 83183928 83184217 -2254263 + AluSx SINE Alu 7 295 -17 1706 151 0 64 chr17 83185126 83185437 -2253043 + AluJb SINE Alu 3 293 -19 1557 204 50 23 chr17 83186107 83186203 -2252277 - L1MB5 LINE L1 -17 6157 6062 456 285 50 59 chr17 83186203 83186377 -2252103 - L1MC4 LINE L1 -1993 6049 5875 2262 94 0 0 chr17 83186377 83186676 -2251804 - AluSx SINE Alu -13 299 1 456 285 50 59 chr17 83186676 83186859 -2251621 - L1MC4 LINE L1 -2167 5875 5695 1798 108 51 44 chr17 83189156 83189452 -2249028 + AluSx SINE Alu 1 298 -14 379 280 0 0 chr17 83189742 83189835 -2248645 + MER5A DNA MER1_type 14 106 -83 1845 179 125 3 chr17 83190168 83190521 -2247959 - MSTD LTR MaLR 0 396 1 1463 158 13 93 chr17 83190603 83190914 -2247566 - AluJo SINE Alu -26 286 1 2241 102 0 28 chr17 83190920 83191242 -2247238 - AluSp SINE Alu 0 313 1 237 161 0 54 chr17 83191242 83191298 -2247182 - AluJo SINE Alu -165 137 85 1191 219 50 112 chr17 83191777 83191905 -2246575 + L1MB5 LINE L1 5616 5750 -424 1481 205 42 0 chr17 83191905 83192188 -2246292 + AluJo SINE Alu 1 295 -17 2161 135 0 0 chr17 83192188 83192499 -2245981 + AluSx SINE Alu 1 311 -1 1191 219 50 112 chr17 83192499 83192871 -2245609 + L1MB5 LINE L1 5748 6086 -88 2031 94 0 14 chr17 83192972 83193247 -2245233 - AluSx SINE Alu -41 271 1 251 203 27 27 chr17 83193860 83193934 -2244546 + CT-rich Low_complexity Low_complexity 1 74 0 27 0 0 0 chr17 83194539 83194566 -2243914 + GC_rich Low_complexity Low_complexity 1 27 0 289 252 98 16 chr17 83194644 83194767 -2243713 - MIR SINE MIR -110 152 20 1955 129 41 0 chr17 83195297 83195592 -2242888 + AluJb SINE Alu 1 307 -5 280 277 0 0 chr17 83196341 83196406 -2242074 + MER63 DNA MER1_type 676 740 -321 2007 125 7 0 chr17 83197039 83197326 -2241154 - AluSx SINE Alu -17 295 7 2620 185 40 87 chr17 83198127 83198576 -2239904 + L1MB5 LINE L1 5395 5864 -310 2057 134 3 10 chr17 83198576 83198890 -2239590 + AluJb SINE Alu 1 312 0 1235 195 119 8 chr17 83198900 83199161 -2239319 + AluJb SINE Alu 1 290 -22 2336 92 0 0 chr17 83199165 83199469 -2239011 + AluSx SINE Alu 1 304 -8 2620 185 40 87 chr17 83199469 83199808 -2238672 + L1MB5 LINE L1 5876 6161 -13 1095 81 0 0 chr17 83200336 83200472 -2238008 + AluSq/x SINE Alu 1 136 -176 1781 122 0 4 chr17 83202114 83202390 -2236090 - AluSx SINE Alu 0 312 38 2072 113 0 3 chr17 83202552 83202844 -2235636 - AluSq SINE Alu -22 291 1 233 383 52 0 chr17 83203203 83203318 -2235162 + MER5C DNA MER1_type 4 124 -200 226 330 22 22 chr17 83203346 83203437 -2235043 + MER5C DNA MER1_type 211 301 -23 561 99 0 0 chr17 83204994 83205075 -2233405 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 187 390 0 0 chr17 83205718 83205777 -2232703 + MIR SINE MIR 127 185 -77 243 292 83 0 chr17 83206069 83206165 -2232315 + MIR SINE MIR 30 133 -75 1694 148 16 35 chr17 83206759 83207107 -2231373 - AluJb SINE Alu 0 312 1 1834 149 0 3 chr17 83207820 83208108 -2230372 + AluJo SINE Alu 1 287 -25 2020 120 10 13 chr17 83208120 83208421 -2230059 + AluSx SINE Alu 1 300 -12 242 159 0 0 chr17 83208707 83208751 -2229729 + Charlie5 DNA MER1_type 2513 2556 -56 229 306 81 8 chr17 83210540 83210664 -2227816 + MER5A DNA MER1_type 39 171 -18 1861 136 20 0 chr17 83211001 83211295 -2227185 - AluSq SINE Alu -13 300 1 348 257 155 26 chr17 83212304 83212530 -2225950 + L1ME4a LINE L1 5758 6012 -109 2180 98 0 3 chr17 83213457 83213752 -2224728 - AluY SINE Alu -17 294 1 2867 172 14 60 chr17 83213753 83214416 -2224064 + LTR8 LTR ERV1 60 691 0 719 151 0 43 chr17 83215181 83215367 -2223113 + CT-rich Low_complexity Low_complexity 1 178 0 1779 140 20 14 chr17 83215371 83215663 -2222817 - AluSx SINE Alu -1 311 18 318 106 0 91 chr17 83217171 83217237 -2221243 - AluSp/q SINE Alu -5 298 239 180 0 0 0 chr17 83217353 83217373 -2221107 + (A)n Simple_repeat Simple_repeat 1 20 0 1830 144 3 37 chr17 83218422 83218445 -2220035 - AluJo SINE Alu -20 292 270 1977 115 35 3 chr17 83218445 83218732 -2219748 + AluSx SINE Alu 1 296 -16 1830 144 3 37 chr17 83218732 83219006 -2219474 - AluJo SINE Alu -42 270 5 569 136 0 0 chr17 83219126 83219207 -2219273 + AluJ/FRAM SINE Alu 216 296 -16 192 325 125 0 chr17 83219321 83219401 -2219079 + MIR SINE MIR 96 185 -77 250 204 287 19 chr17 83219447 83219555 -2218925 + MER5A DNA MER1_type 46 182 -7 2171 104 0 28 chr17 83220236 83220536 -2217944 + AluSx SINE Alu 1 293 -19 199 0 0 0 chr17 83220536 83220558 -2217922 + (TAAAA)n Simple_repeat Simple_repeat 3 140 0 2171 104 0 28 chr17 83220558 83220575 -2217905 + AluSx SINE Alu 293 309 -3 2350 83 3 0 chr17 83221339 83221640 -2216840 + AluSx SINE Alu 3 304 -8 1496 216 61 72 chr17 83222226 83222698 -2215782 + MLT1C LTR MaLR 1 467 0 191 292 42 14 chr17 83222984 83223056 -2215424 - MIR SINE MIR -64 198 125 189 352 33 0 chr17 83223486 83223577 -2214903 - L2 LINE L2 -20 3293 3200 2206 93 3 10 chr17 83225168 83225469 -2213011 + AluSx SINE Alu 1 299 -13 757 245 78 10 chr17 83225649 83225857 -2212623 - MIR SINE MIR -1 261 41 315 237 26 0 chr17 83225959 83226035 -2212445 + L2 LINE L2 3195 3272 0 274 294 83 46 chr17 83226230 83226339 -2212141 + L2 LINE L2 3155 3267 -5 2316 95 16 0 chr17 83226502 83226806 -2211674 - AluSc SINE Alu 0 309 1 1540 169 7 14 chr17 83226807 83227085 -2211395 - AluJb SINE Alu 0 312 37 228 304 38 13 chr17 83227109 83227188 -2211292 - MIR SINE MIR -67 141 61 1310 127 0 0 chr17 83228066 83228247 -2210233 - AluJo SINE Alu -131 181 1 1940 168 0 0 chr17 83228474 83228784 -2209696 - AluJo SINE Alu 0 312 3 416 250 18 73 chr17 83228800 83228964 -2209516 - MIR3 SINE MIR -43 165 11 24 93 0 0 chr17 83229849 83229903 -2208577 + GC_rich Low_complexity Low_complexity 1 54 0 216 97 0 0 chr17 83230263 83230294 -2208186 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 190 224 0 20 chr17 83230560 83230609 -2207871 - MIR3 SINE MIR -45 163 116 2053 124 20 0 chr17 83230960 83231266 -2207214 + AluSx SINE Alu 1 312 0 202 75 75 0 chr17 83231266 83231306 -2207174 + GA-rich Low_complexity Low_complexity 1 43 0 195 184 26 0 chr17 83231471 83231509 -2206971 - MER5A DNA MER1_type 0 189 151 2012 126 0 0 chr17 83232457 83232743 -2205737 - AluSx SINE Alu -26 286 1 2239 68 0 42 chr17 83232939 83233250 -2205230 - AluSc SINE Alu -10 299 2 294 330 29 43 chr17 83233336 83233545 -2204935 - MIR SINE MIR -46 216 11 2043 114 3 26 chr17 83234628 83234936 -2203544 - AluSx SINE Alu -11 301 1 1575 163 0 57 chr17 83235022 83235176 -2203304 - AluJo SINE Alu -28 284 154 2151 114 0 0 chr17 83235176 83235466 -2203014 - AluSx SINE Alu -22 290 1 1575 163 0 57 chr17 83235466 83235611 -2202869 - AluJo SINE Alu -158 154 2 598 141 40 10 chr17 83236614 83236713 -2201767 - AluJo SINE Alu -175 137 36 597 64 0 0 chr17 83237318 83237396 -2201084 + (ATG)n Simple_repeat Simple_repeat 2 79 0 1773 154 25 0 chr17 83237401 83237681 -2200799 - AluSx SINE Alu -25 287 1 2200 85 3 3 chr17 83237681 83237976 -2200504 - AluSp SINE Alu -18 295 1 1910 154 7 0 chr17 83237976 83238275 -2200205 - AluJo SINE Alu -11 301 1 1189 147 22 52 chr17 83238790 83239022 -2199458 - AluJo SINE Alu -87 225 1 1531 113 131 39 chr17 83239424 83239570 -2198910 - AluSg SINE Alu -1 309 178 2093 103 7 7 chr17 83239570 83239862 -2198618 - AluSg SINE Alu -18 292 1 1531 113 131 39 chr17 83239862 83239998 -2198482 - AluSg SINE Alu -132 178 1 2052 130 0 7 chr17 83240000 83240293 -2198187 - AluSx SINE Alu -21 291 1 21 0 0 0 chr17 83241134 83241155 -2197325 + GC_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr17 83243240 83243271 -2195209 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 2197 126 0 0 chr17 83244059 83244369 -2194111 - AluSg SINE Alu 0 310 1 318 294 264 15 chr17 83245113 83245378 -2193102 - L2 LINE L2 -1 3271 2941 2446 55 0 10 chr17 83245862 83246170 -2192310 - AluY SINE Alu -6 305 1 1921 95 78 3 chr17 83246467 83246750 -2191730 - AluSp SINE Alu -7 306 3 2106 111 3 13 chr17 83248341 83248513 -2189967 - AluSg SINE Alu -7 303 134 2185 106 0 3 chr17 83248513 83248816 -2189664 - AluY SINE Alu -9 302 1 2106 111 3 13 chr17 83248816 83248949 -2189531 - AluSg SINE Alu -176 134 1 430 267 46 28 chr17 83249662 83249854 -2188626 - L1MCa LINE L1 -2876 3550 3363 1838 143 0 20 chr17 83249854 83250148 -2188332 - AluSq SINE Alu -25 288 1 406 288 0 40 chr17 83250148 83250273 -2188207 - L1M4 LINE L1 -3002 3144 3025 367 275 42 8 chr17 83250599 83250719 -2187761 - L1ME3A LINE L1 -138 6032 5909 1581 149 19 0 chr17 83251676 83251937 -2186543 - AluSx SINE Alu -8 304 39 2096 106 3 0 chr17 83252073 83252356 -2186124 - AluSp SINE Alu -29 284 1 2165 113 0 0 chr17 83252399 83252692 -2185788 - AluSg SINE Alu -17 293 1 180 0 0 0 chr17 83253358 83253378 -2185102 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 292 268 39 85 chr17 83253395 83253431 -2185049 - MER5B DNA MER1_type -32 146 110 2415 66 0 7 chr17 83253431 83253732 -2184748 + AluY SINE Alu 1 299 -12 292 268 39 85 chr17 83253732 83253848 -2184632 - MER5B DNA MER1_type -68 110 1 2040 129 0 3 chr17 83254428 83254714 -2183766 - AluSx SINE Alu -27 285 1 1196 234 57 13 chr17 83255357 83255656 -2182824 + MER58B DNA MER1_type 27 338 -3 2242 81 7 0 chr17 83256113 83256408 -2182072 - AluSp SINE Alu -16 297 1 212 302 0 0 chr17 83256528 83256581 -2181899 - L2 LINE L2 0 3272 3220 246 188 31 47 chr17 83257164 83257228 -2181252 - MLT1L LTR MaLR 0 615 553 721 157 16 8 chr17 83257231 83257352 -2181128 + FLAM_A SINE Alu 1 122 -11 337 280 15 85 chr17 83257606 83257806 -2180674 - MLT1K LTR MaLR -393 195 10 255 360 175 0 chr17 83258405 83258594 -2179886 - MIR SINE MIR -6 256 35 2181 96 10 0 chr17 83258778 83259070 -2179410 + AluSx SINE Alu 1 295 -17 2128 133 0 0 chr17 83259750 83260059 -2178421 - AluSg SINE Alu -1 309 1 670 307 112 24 chr17 83260127 83260466 -2178014 - L2 LINE L2 -5 3308 2940 601 108 0 10 chr17 83261190 83261292 -2177188 - FRAM SINE Alu -2 174 74 2297 88 0 3 chr17 83264636 83264931 -2173549 + AluSq SINE Alu 1 294 -19 2333 83 7 0 chr17 83265952 83266253 -2172227 - AluSx SINE Alu -9 303 1 265 270 122 86 chr17 83266447 83266981 -2171499 - L1ME4a LINE L1 -213 5908 5356 1608 164 14 17 chr17 83267041 83267334 -2171146 - AluJb SINE Alu -20 292 1 257 232 84 42 chr17 83268808 83268903 -2169577 - HAL1 LINE L1 -100 2407 2309 293 262 47 40 chr17 83268934 83269083 -2169397 - L1MC5 LINE L1 -282 7679 7530 25 0 0 0 chr17 83269922 83269947 -2168533 + GC_rich Low_complexity Low_complexity 1 25 0 300 177 44 5 chr17 83470585 83470673 -1967807 - AluS SINE Alu -227 76 6 606 247 36 12 chr17 83470879 83471045 -1967435 - MER3 DNA MER1_type 0 209 40 2452 101 0 0 chr17 83471179 83471485 -1966995 - AluSx SINE Alu -4 308 3 954 185 82 35 chr17 83471876 83472108 -1966372 + AluJo SINE Alu 61 303 -9 320 289 0 0 chr17 83472118 83472194 -1966286 + L1M4 LINE L1 4628 4703 -1443 2347 76 10 10 chr17 83472231 83472532 -1965948 + AluY SINE Alu 1 301 -10 382 96 0 0 chr17 83472610 83472662 -1965818 - AluSx SINE Alu -11 290 239 1229 139 0 0 chr17 83472664 83472830 -1965650 - AluSx SINE Alu -115 197 32 676 207 53 7 chr17 83473575 83473725 -1964755 + FRAM SINE Alu 1 157 -9 363 226 0 0 chr17 83473777 83473941 -1964539 + (TG)n Simple_repeat Simple_repeat 2 165 0 392 224 3 0 chr17 83473979 83474330 -1964150 + (TG)n Simple_repeat Simple_repeat 1 352 0 180 226 0 0 chr17 83474381 83474443 -1964037 + (TG)n Simple_repeat Simple_repeat 1 62 0 25 0 0 0 chr17 83474866 83474891 -1963589 + AT_rich Low_complexity Low_complexity 1 25 0 28 0 0 0 chr17 83475192 83475220 -1963260 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr17 83475331 83475370 -1963110 + (A)n Simple_repeat Simple_repeat 1 39 0 2180 140 0 6 chr17 83476045 83476359 -1962121 + AluJb SINE Alu 1 312 0 2223 124 0 0 chr17 83476812 83477118 -1961362 + AluSx SINE Alu 3 308 -4 314 337 65 57 chr17 83477121 83477400 -1961080 - L1M4 LINE L1 -2793 3353 3073 2110 122 3 3 chr17 83477924 83478083 -1960397 - AluSq SINE Alu -17 296 135 2410 64 7 20 chr17 83478083 83478380 -1960100 - AluSc SINE Alu -16 293 1 2110 122 3 3 chr17 83478380 83478508 -1959972 - AluSq SINE Alu -177 136 9 216 261 26 46 chr17 83478951 83479104 -1959376 + G-rich Low_complexity Low_complexity 5 154 0 183 139 0 0 chr17 83479107 83479143 -1959337 + (G)n Simple_repeat Simple_repeat 1 36 0 204 158 0 0 chr17 83479312 83479350 -1959130 + GA-rich Low_complexity Low_complexity 2 39 0 183 271 0 0 chr17 83479786 83479834 -1958646 + MIR SINE MIR 113 160 -102 1061 152 25 0 chr17 83480352 83480550 -1957930 - L1MA5 LINE L1 0 6300 6098 662 105 0 0 chr17 83480552 83480647 -1957833 + AluS SINE Alu 2 96 -217 461 165 0 0 chr17 83480647 83480726 -1957754 - L1MA5 LINE L1 -602 5695 5617 313 231 26 39 chr17 83481004 83481082 -1957398 - L1ME4a LINE L1 -54 6067 5991 2120 126 7 3 chr17 83481146 83481440 -1957040 - AluSq SINE Alu -18 295 1 1282 141 8 103 chr17 83482003 83482071 -1956409 + AluJb SINE Alu 72 145 -167 2220 113 7 0 chr17 83482071 83482363 -1956117 - AluSx SINE Alu -18 294 1 1282 141 8 103 chr17 83482363 83482556 -1955924 + AluJb SINE Alu 145 308 -4 763 249 16 5 chr17 83482629 83482814 -1955666 + MLT1C LTR MaLR 265 451 -16 464 267 8 8 chr17 83482988 83483108 -1955372 - MER45A DNA AcHobo 0 178 59 438 175 88 129 chr17 83483178 83483316 -1955164 + L1MB8 LINE L1 6015 6146 -32 1828 163 3 35 chr17 83483316 83483629 -1954851 - AluJo SINE Alu -9 303 1 438 175 88 129 chr17 83483629 83483661 -1954819 + L1MB8 LINE L1 6146 6178 0 772 114 81 0 chr17 83483677 83483823 -1954657 + FLAM_C SINE Alu 1 156 0 267 137 0 0 chr17 83484639 83484690 -1953790 + Alu SINE Alu 252 302 0 234 0 0 0 chr17 83484975 83485001 -1953479 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1223 199 11 23 chr17 83485006 83485272 -1953208 - AluJo SINE Alu -35 277 15 2026 140 43 28 chr17 83485412 83485805 -1952675 - MER65A LTR ERV1 0 445 47 2179 111 24 0 chr17 83485807 83486105 -1952375 - AluSx SINE Alu -6 306 2 201 387 50 0 chr17 83486235 83486354 -1952126 - MIR SINE MIR -57 205 81 198 0 0 0 chr17 83486796 83486818 -1951662 + (TA)n Simple_repeat Simple_repeat 2 23 0 2155 142 3 0 chr17 83486821 83487132 -1951348 - AluSx SINE Alu 0 312 1 306 215 215 22 chr17 83487308 83487443 -1951037 + MIR SINE MIR 14 174 -88 887 119 0 0 chr17 83487679 83487797 -1950683 + AluSc SINE Alu 176 293 -16 1908 113 4 4 chr17 83487823 83488089 -1950391 - AluSg SINE Alu -6 304 39 865 313 144 50 chr17 83488835 83488928 -1949552 + L1M4 LINE L1 3797 3880 -2266 2342 115 0 3 chr17 83488928 83489241 -1949239 + AluSx SINE Alu 1 312 0 865 313 144 50 chr17 83489241 83489951 -1948529 + L1M4 LINE L1 3880 4676 -1470 1522 159 48 79 chr17 83490049 83490218 -1948262 - AluJo SINE Alu -7 305 149 270 0 0 0 chr17 83490218 83490248 -1948232 + (TA)n Simple_repeat Simple_repeat 2 31 0 1522 159 48 79 chr17 83490248 83490393 -1948087 - AluJo SINE Alu -163 149 1 325 298 6 70 chr17 83490414 83490572 -1947908 - L1MC4a LINE L1 -1830 5978 5831 1738 165 44 24 chr17 83490579 83490876 -1947604 + AluJo SINE Alu 1 303 -9 320 289 0 0 chr17 83490886 83490962 -1947518 + L1M4 LINE L1 4628 4703 -1443 2530 67 0 0 chr17 83490999 83491297 -1947183 + AluY SINE Alu 1 298 -13 294 171 79 21 chr17 83491420 83491560 -1946920 + (CCGGG)n Simple_repeat Simple_repeat 4 151 0 * 372 218 40 6 chr17 83491508 83491682 -1946798 + (CGCGG)n Simple_repeat Simple_repeat 1 180 0 458 191 0 0 chr17 83491692 83491776 -1946704 + G-rich Low_complexity Low_complexity 1 84 0 568 157 9 9 chr17 83491778 83491893 -1946587 + CT-rich Low_complexity Low_complexity 4 118 0 1099 157 6 0 chr17 83491904 83492070 -1946410 - FRAM SINE Alu -9 167 1 216 0 0 0 chr17 83492079 83492103 -1946377 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 410 213 21 0 chr17 83493231 83493325 -1945155 + MER94 DNA DNA 25 120 -14 2191 120 10 0 chr17 83493458 83493766 -1944714 - AluSx SINE Alu -1 311 1 247 184 0 20 chr17 83493835 83493884 -1944596 + CT-rich Low_complexity Low_complexity 5 52 0 243 0 0 0 chr17 83493887 83493914 -1944566 + (CA)n Simple_repeat Simple_repeat 1 27 0 27 0 0 0 chr17 83494111 83494138 -1944342 + AT_rich Low_complexity Low_complexity 1 27 0 289 167 0 0 chr17 83494138 83494186 -1944294 - MER66B LTR ERV1 -139 347 300 2260 103 3 3 chr17 83494193 83494485 -1943995 - AluSg SINE Alu -18 292 1 26 30 0 0 chr17 83494485 83494518 -1943962 + AT_rich Low_complexity Low_complexity 1 33 0 243 235 37 12 chr17 83494552 83494633 -1943847 - HAL1b LINE L1 -338 1010 928 524 153 31 0 chr17 83494645 83494743 -1943737 + AluJ/FLAM SINE Alu 2 102 -210 2044 102 46 11 chr17 83494951 83495235 -1943245 - AluSg SINE Alu -16 294 1 1971 172 75 29 chr17 83496053 83496535 -1941945 - MLT1D LTR MaLR -1 504 1 184 275 225 0 chr17 83499574 83499654 -1938826 - MIR SINE MIR -76 186 89 215 59 0 29 chr17 83499786 83499820 -1938660 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 2044 79 53 4 chr17 83499825 83500091 -1938389 - AluSg SINE Alu -23 287 9 1899 143 44 14 chr17 83501967 83502331 -1936149 - THE1C LTR MaLR 0 375 1 753 244 44 0 chr17 83502989 83503194 -1935286 - MER58B DNA MER1_type -15 326 113 2316 110 7 0 chr17 83503489 83503798 -1934682 - AluSx SINE Alu -1 311 1 215 95 71 24 chr17 83506058 83506100 -1932380 + T-rich Low_complexity Low_complexity 2 45 0 270 218 27 73 chr17 83506483 83506544 -1931936 + L1ME4a LINE L1 6011 6066 -55 2436 85 0 3 chr17 83506544 83506839 -1931641 - AluSx SINE Alu -18 294 1 270 218 27 73 chr17 83506839 83506887 -1931593 + L1ME4a LINE L1 6066 6115 -6 1976 129 11 18 chr17 83507668 83507980 -1930500 - AluSx SINE Alu 0 311 2 1210 204 26 0 chr17 83508021 83508286 -1930194 - L1MA4 LINE L1 -6 6294 6023 292 338 73 7 chr17 83508390 83508526 -1929954 - MIR SINE MIR -31 231 87 454 160 0 0 chr17 83508706 83508781 -1929699 - AluSc SINE Alu -56 253 179 1771 143 114 0 chr17 83508858 83509138 -1929342 - AluJb SINE Alu 0 312 1 2075 105 20 31 chr17 83509146 83509440 -1929040 - AluSx SINE Alu -19 293 3 1407 151 0 14 chr17 83509931 83510149 -1928331 + AluSg/x SINE Alu 87 301 -11 3064 229 48 32 chr17 83510160 83510721 -1927759 + L1ME1 LINE L1 4504 5054 -1112 2610 64 0 6 chr17 83510721 83511034 -1927446 - AluY SINE Alu 0 311 1 3064 229 48 32 chr17 83511034 83511542 -1926938 + L1ME1 LINE L1 5054 5580 -586 2145 112 14 7 chr17 83511542 83511838 -1926642 - AluSx SINE Alu -13 299 2 3064 229 48 32 chr17 83511838 83511864 -1926616 + L1ME1 LINE L1 5580 5604 -562 937 165 41 6 chr17 83511876 83512046 -1926434 - Tigger1 DNA MER2_type -7 2411 2236 1167 103 0 0 chr17 83512046 83512191 -1926289 + AluSq SINE Alu 1 145 -168 1235 140 17 0 chr17 83512370 83512549 -1925931 + AluSq SINE Alu 121 302 -11 388 123 0 4 chr17 83512560 83512610 -1925870 + Alu SINE Alu 1 29 -279 1959 142 0 7 chr17 83512610 83512891 -1925589 + AluSx SINE Alu 11 289 -23 388 123 0 4 chr17 83512891 83512913 -1925567 + Alu SINE Alu 29 50 -258 * 1721 141 14 21 chr17 83512898 83513188 -1925292 - Tigger1 DNA MER2_type -803 1615 1328 676 150 31 24 chr17 83513192 83513319 -1925161 - FLAM_C SINE Alu -1 132 5 2045 75 94 0 chr17 83513329 83513596 -1924884 - AluY SINE Alu -19 292 1 3626 171 30 31 chr17 83513600 83513839 -1924641 - Tigger1 DNA MER2_type -1712 706 468 1973 120 62 0 chr17 83513839 83514131 -1924349 + AluSx SINE Alu 1 310 -2 3626 171 30 31 chr17 83514131 83514543 -1923937 - Tigger1 DNA MER2_type -1950 468 53 2067 88 4 4 chr17 83514543 83514840 -1923640 + AluY SINE Alu 22 318 0 3626 171 30 31 chr17 83514840 83514893 -1923587 - Tigger1 DNA MER2_type -2365 53 1 1552 212 32 0 chr17 83514893 83515232 -1923248 + L1ME1 LINE L1 5640 5989 -177 1356 190 60 68 chr17 83515606 83515689 -1922791 - MER47A DNA MER2_type -1957 366 284 2244 92 3 16 chr17 83515689 83515993 -1922487 + AluSq SINE Alu 6 305 -8 1356 190 60 68 chr17 83515993 83516278 -1922202 - MER47A DNA MER2_type -2039 284 1 1128 99 6 47 chr17 83517036 83517208 -1921272 - AluJb SINE Alu -16 296 132 1814 169 0 20 chr17 83517213 83517509 -1920971 - AluJo SINE Alu -22 290 1 276 130 0 0 chr17 83517996 83518042 -1920438 + (TC)n Simple_repeat Simple_repeat 1 46 0 2254 108 0 19 chr17 83518042 83518358 -1920122 - AluY SINE Alu -1 310 1 2355 97 3 0 chr17 83519489 83519798 -1918682 + AluSx SINE Alu 1 310 -2 242 292 39 62 chr17 83520240 83520370 -1918110 + L1MC/D LINE L1 5790 5916 -1892 2146 115 24 0 chr17 83521051 83521346 -1917134 - AluSg1 SINE Alu -7 302 1 248 269 0 0 chr17 83521526 83521593 -1916887 - L2 LINE L2 -2 3270 3204 423 169 8 39 chr17 83522570 83522700 -1915780 + GA-rich Low_complexity Low_complexity 2 127 0 2438 131 3 0 chr17 83522824 83523191 -1915289 + MER41B LTR ERV1 1 368 -267 1714 164 0 38 chr17 83523191 83523484 -1914996 + AluJo SINE Alu 1 282 -30 2317 38 3 0 chr17 83523485 83523775 -1914705 + L1PA4 LINE L1 5863 6153 -2 1046 150 0 6 chr17 83523959 83524119 -1914361 - FRAM SINE Alu -18 158 1 189 0 0 0 chr17 83524204 83524225 -1914255 + (TTAGGG)n Simple_repeat Simple_repeat 1 21 0 2343 106 0 0 chr17 83524715 83525018 -1913462 - AluSx SINE Alu -9 303 1 274 346 82 5 chr17 83525024 83525232 -1913248 - L1M4 LINE L1 -1013 5133 4910 408 164 0 0 chr17 83525378 83525451 -1913029 - AluJb SINE Alu -17 295 223 303 303 0 0 chr17 83525481 83525557 -1912923 - L1M4 LINE L1 -1443 4703 4628 1359 133 0 73 chr17 83525587 83525821 -1912659 - AluJb SINE Alu -95 217 1 384 257 28 0 chr17 83525861 83525970 -1912510 - MER81 DNA DNA 0 114 3 2404 92 0 0 chr17 83526222 83526517 -1911963 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr17 83526574 83526595 -1911885 + AT_rich Low_complexity Low_complexity 1 21 0 2610 54 0 0 chr17 83528189 83528487 -1909993 - AluY SINE Alu -13 298 1 913 111 0 15 chr17 83528694 83528829 -1909651 + FLAM_C SINE Alu 1 133 0 195 162 0 0 chr17 83529388 83529425 -1909055 + G-rich Low_complexity Low_complexity 1 37 0 380 241 12 24 chr17 83529548 83529714 -1908766 + G-rich Low_complexity Low_complexity 1 164 0 276 85 0 43 chr17 83529714 83529787 -1908693 + Alu SINE Alu 249 302 0 289 228 58 117 chr17 83529835 83530006 -1908474 + MER5B DNA MER1_type 3 163 -15 472 336 85 52 chr17 83530052 83530534 -1907946 - HAL1 LINE L1 -1040 1467 970 3273 68 14 2 chr17 83530777 83531215 -1907265 + MLT2A1 LTR ERVL 2 444 0 2898 16 0 0 chr17 83531697 83532006 -1906474 - AluYa5 SINE Alu -2 309 1 2316 100 0 0 chr17 83532612 83532911 -1905569 + AluSx SINE Alu 3 301 -11 513 214 87 69 chr17 83533902 83533925 -1904555 + MER20 DNA MER1_type 40 61 -158 2275 89 3 48 chr17 83533925 83534241 -1904239 - AluSq SINE Alu -11 302 1 513 214 87 69 chr17 83534241 83534390 -1904090 + MER20 DNA MER1_type 61 215 -4 2111 71 46 7 chr17 83535083 83535365 -1903115 - AluSx SINE Alu -19 293 1 255 255 137 0 chr17 83535683 83535785 -1902695 + MIR SINE MIR 91 206 -56 239 111 0 111 chr17 83536154 83536208 -1902272 + MER65A LTR ERV1 1 48 -397 2325 97 10 3 chr17 83536208 83536516 -1901964 + AluSx SINE Alu 1 310 -2 932 81 0 0 chr17 83536538 83536649 -1901831 + AluSq/x SINE Alu 1 111 -201 2120 128 0 0 chr17 83536977 83537266 -1901214 - AluSx SINE Alu -23 289 1 1012 120 0 25 chr17 83537987 83538145 -1900335 + AluSc SINE Alu 35 188 -121 1090 155 0 0 chr17 83538980 83539135 -1899345 - AluSx SINE Alu -157 155 1 2394 91 3 7 chr17 83539366 83539675 -1898805 - AluSc SINE Alu -1 308 1 2171 120 3 0 chr17 83539677 83539968 -1898512 - AluSx SINE Alu -17 295 4 432 0 0 0 chr17 83540499 83540547 -1897933 + (TA)n Simple_repeat Simple_repeat 2 49 0 228 376 6 12 chr17 83541288 83541458 -1897022 + G-rich Low_complexity Low_complexity 3 171 0 21 0 0 0 chr17 83541545 83541566 -1896914 + GC_rich Low_complexity Low_complexity 1 21 0 29 70 0 0 chr17 83541604 83541661 -1896819 + GC_rich Low_complexity Low_complexity 1 57 0 187 138 52 0 chr17 83542275 83542333 -1896147 + G-rich Low_complexity Low_complexity 5 65 0 201 121 0 0 chr17 83542368 83542401 -1896079 + (CGG)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr17 83542451 83542481 -1895999 + GC_rich Low_complexity Low_complexity 1 30 0 37 76 0 0 chr17 83542527 83542606 -1895874 + GC_rich Low_complexity Low_complexity 1 79 0 245 164 0 18 chr17 83542988 83543043 -1895437 + GA-rich Low_complexity Low_complexity 3 56 0 2272 97 7 7 chr17 83543735 83544044 -1894436 + AluSx SINE Alu 1 309 -3 548 274 49 6 chr17 83544111 83544275 -1894205 - MIR SINE MIR -60 202 32 1528 196 58 0 chr17 83544575 83544851 -1893629 + AluJb SINE Alu 1 292 -20 1302 169 48 0 chr17 83545059 83545266 -1893214 + AluSg/x SINE Alu 85 301 -9 2960 122 58 66 chr17 83545266 83545421 -1893059 - Tigger1 DNA MER2_type -194 2224 2069 1998 132 0 24 chr17 83545421 83545717 -1892763 - AluSx SINE Alu -21 291 3 2960 122 58 66 chr17 83545717 83546180 -1892300 - Tigger1 DNA MER2_type -349 2069 1611 294 67 22 0 chr17 83546180 83546225 -1892255 - MADE1 DNA Mariner 0 80 35 1249 69 0 0 chr17 83546232 83546377 -1892103 + AluSq SINE Alu 1 145 -167 1235 140 17 0 chr17 83546556 83546735 -1891745 + AluSq SINE Alu 121 302 -11 388 80 0 0 chr17 83546746 83546796 -1891684 + Alu SINE Alu 1 50 -250 2234 107 0 7 chr17 83546796 83547087 -1891393 + AluSx SINE Alu 11 299 -13 2336 107 0 0 chr17 83547087 83547385 -1891095 + AluSg SINE Alu 1 298 -12 1191 178 97 48 chr17 83547980 83548230 -1890250 - MLT1A1 LTR MaLR -16 349 78 1964 126 0 90 chr17 83548230 83548564 -1889916 - AluSp SINE Alu -9 304 1 1191 178 97 48 chr17 83548564 83548644 -1889836 - MLT1A1 LTR MaLR -287 78 3 2415 88 3 0 chr17 83548918 83549213 -1889267 + AluSp SINE Alu 1 296 -17 762 177 34 29 chr17 83549431 83549606 -1888874 + MER45A DNA AcHobo 3 178 0 2070 261 127 9 chr17 83550496 83550843 -1887637 - L1ME1 LINE L1 -15 6220 5915 1627 198 0 34 chr17 83550843 83550886 -1887594 - AluJo SINE Alu 0 312 269 2417 95 0 0 chr17 83550886 83551190 -1887290 + AluSx SINE Alu 1 304 -8 1627 198 0 34 chr17 83551190 83551469 -1887011 - AluJo SINE Alu -43 269 1 2070 261 127 9 chr17 83551469 83551900 -1886580 - L1ME1 LINE L1 -320 5915 5350 1675 259 97 16 chr17 83551906 83552481 -1885999 - MLT1E2 LTR MaLR -4 622 1 1314 193 24 38 chr17 83552497 83552627 -1885853 + AluJo SINE Alu 1 131 -171 2657 48 0 16 chr17 83552627 83552943 -1885537 + AluY SINE Alu 1 311 0 1314 193 24 38 chr17 83552943 83553102 -1885378 + AluJo SINE Alu 131 286 -16 369 0 0 0 chr17 83553102 83553143 -1885337 + (CA)n Simple_repeat Simple_repeat 2 42 0 2683 229 55 29 chr17 83553153 83553960 -1884520 - L1ME1 LINE L1 -1247 4968 4141 1195 220 66 37 chr17 83553958 83554335 -1884145 - L1ME1 LINE L1 -3587 2628 2241 * 2837 153 78 34 chr17 83554431 83555072 -1883408 - L1MB7 LINE L1 -21 6163 5495 2043 149 33 14 chr17 83555081 83555444 -1883036 - THE1C LTR MaLR 0 375 6 3186 191 103 21 chr17 83555471 83556348 -1882132 - L1MB7 LINE L1 -1610 4536 3578 1724 155 4 4 chr17 83556348 83556613 -1881867 + AluSg SINE Alu 31 295 -15 3186 191 103 21 chr17 83556613 83556653 -1881827 - L1MB7 LINE L1 -2568 3578 3543 804 216 123 3 chr17 83556695 83557005 -1881475 - L1MB7 LINE L1 -2724 3422 3076 487 241 105 89 chr17 83556994 83557376 -1881104 - L1ME1 LINE L1 -4106 2290 1903 * 222 62 0 0 chr17 83557577 83557609 -1880871 + (A)n Simple_repeat Simple_repeat 1 32 0 2285 101 7 3 chr17 83557709 83558007 -1880473 + AluSq SINE Alu 5 303 -10 276 240 107 0 chr17 83559342 83559417 -1879063 - MER5A DNA MER1_type -80 109 27 808 182 30 48 chr17 83559644 83559809 -1878671 + AluJo SINE Alu 12 173 -139 23 33 0 0 chr17 83559841 83559871 -1878609 + AT_rich Low_complexity Low_complexity 1 30 0 406 184 19 48 chr17 83559894 83559997 -1878483 + AluJb SINE Alu 213 312 0 1679 196 0 0 chr17 83560000 83560276 -1878204 + AluJb SINE Alu 1 276 -36 2366 90 7 3 chr17 83560328 83560638 -1877842 + AluY SINE Alu 1 311 0 2414 98 3 16 chr17 83561072 83561388 -1877092 + AluSx SINE Alu 1 312 0 1703 123 86 48 chr17 83562139 83562431 -1876049 + AluSx SINE Alu 1 303 -9 269 291 15 30 chr17 83562435 83562569 -1875911 + L1M4 LINE L1 2699 2830 -3316 362 290 30 0 chr17 83563286 83563386 -1875094 + MER5B DNA MER1_type 6 108 -70 341 220 15 2 chr17 83563398 83563531 -1874949 + MER58 DNA MER1_type 168 2410 -10 1274 175 5 0 chr17 83564057 83564268 -1874212 - AluJo SINE Alu -14 298 87 2048 97 0 103 chr17 83565766 83566106 -1872374 - AluY SINE Alu -6 305 1 256 282 29 0 chr17 83566292 83566395 -1872085 + MER5A DNA MER1_type 10 115 -74 1114 97 0 0 chr17 83566510 83566655 -1871825 - AluSg/x SINE Alu -5 305 161 837 265 228 6 chr17 83567400 83568050 -1870430 + L2 LINE L2 2508 3313 0 193 302 19 0 chr17 83568166 83568219 -1870261 - MIR SINE MIR -114 94 41 2204 84 33 0 chr17 83568586 83568939 -1869541 + L1PA8 LINE L1 5805 6168 0 1817 158 0 13 chr17 83569006 83569310 -1869170 + AluJo SINE Alu 1 300 -12 2178 112 3 0 chr17 83569599 83569895 -1868585 - AluSx SINE Alu -15 297 1 278 297 50 10 chr17 83570396 83570497 -1867983 + L2 LINE L2 2270 2374 -940 259 87 0 22 chr17 83570502 83570548 -1867932 - L1MB5 LINE L1 -1 6173 6129 2527 40 0 0 chr17 83570553 83570849 -1867631 - AluY SINE Alu -15 296 1 1766 162 10 27 chr17 83570858 83571154 -1867326 - AluJo SINE Alu -21 291 1 640 187 89 8 chr17 83571161 83571284 -1867196 - FLAM_C SINE Alu 0 133 1 1850 126 10 50 chr17 83571314 83571447 -1867033 + AluSq SINE Alu 1 138 -195 2522 55 3 0 chr17 83571447 83571757 -1866723 + AluY SINE Alu 1 311 0 1850 126 10 50 chr17 83571757 83571968 -1866512 + AluSq SINE Alu 138 333 0 1854 134 7 26 chr17 83571975 83572282 -1866198 + AluSx SINE Alu 1 301 -11 1280 233 93 0 chr17 83572283 83572627 -1865853 - L1MB5 LINE L1 -54 6120 5745 967 171 91 74 chr17 83572650 83572968 -1865512 - LTR8A LTR ERV1 0 727 313 2117 110 6 19 chr17 83572968 83573285 -1865195 + AluSq SINE Alu 1 313 0 967 171 91 74 chr17 83573285 83573491 -1864989 - LTR8A LTR ERV1 -414 313 112 686 153 0 62 chr17 83573494 83573638 -1864842 + FRAM SINE Alu 41 175 -1 418 216 79 94 chr17 83573732 83574060 -1864420 + LOR1-int LTR ERV1 1336 2140 -2740 2067 121 0 0 chr17 83574072 83574354 -1864126 - AluSx SINE Alu -30 282 1 2315 131 3 0 chr17 83574354 83574721 -1863759 - MER41B LTR ERV1 -267 368 1 1489 229 52 23 chr17 83574742 83575126 -1863354 + LOR1-int LTR ERV1 1845 2239 -4092 1941 167 0 3 chr17 83575226 83575537 -1862943 + AluJb SINE Alu 3 312 0 335 197 307 15 chr17 83575552 83575689 -1862791 + MER41B LTR ERV1 174 350 -285 * 572 294 101 21 chr17 83575667 83575953 -1862527 + MER66B LTR ERV1 169 477 -9 314 239 80 0 chr17 83575953 83576041 -1862439 + LOR1-int LTR ERV1 3095 3189 -4348 1138 177 94 41 chr17 83576044 83576563 -1861917 + LTR36 LTR ERV1 6 599 -12 676 221 14 86 chr17 83576932 83577154 -1861326 + LOR1-int LTR ERV1 3202 3407 -4130 180 0 0 0 chr17 83577181 83577201 -1861279 + (TCTCCC)n Simple_repeat Simple_repeat 2 21 0 1034 43 0 37 chr17 83577201 83577364 -1861116 + SVA Other Other 1 157 -1229 909 151 38 145 chr17 83577364 83577830 -1860650 + LOR1-int LTR ERV1 1242 3045 -2901 611 248 0 0 chr17 83577834 83577959 -1860521 - AluSg/x SINE Alu -8 302 178 610 141 33 0 chr17 83577979 83578100 -1860380 + LOR1-int LTR ERV1 3424 3548 -2783 270 105 0 35 chr17 83578100 83578157 -1860323 + Alu SINE Alu 247 301 0 1656 117 52 90 chr17 83578157 83578622 -1859858 + LOR1-int LTR ERV1 3550 4031 -2750 2071 137 0 10 chr17 83578622 83578936 -1859544 - AluSx SINE Alu -1 311 1 1656 117 52 90 chr17 83578936 83579106 -1859374 + LOR1-int LTR ERV1 4031 4590 -2191 * 3634 122 23 65 chr17 83579101 83579671 -1858809 + LOR1-int LTR ERV1 4845 5438 -893 1324 229 50 0 chr17 83579671 83579791 -1858689 + AluJo SINE Alu 1 114 -198 180 0 0 0 chr17 83579791 83579811 -1858669 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1324 229 50 0 chr17 83579811 83579970 -1858510 + AluJo SINE Alu 114 294 -18 1845 192 0 0 chr17 83579970 83580282 -1858198 + AluSx SINE Alu 1 312 0 3634 122 23 65 chr17 83580282 83580489 -1857991 + LOR1-int LTR ERV1 5436 5590 -741 439 213 12 0 chr17 83580490 83580570 -1857910 + FLAM SINE Alu 44 124 -19 905 191 10 5 chr17 83580582 83580791 -1857689 + LOR1-int LTR ERV1 5581 5790 -541 5752 164 23 33 chr17 83580796 83581878 -1856602 - MER11C LTR ERVK 0 1071 1 599 164 25 0 chr17 83581893 83582015 -1856465 + MER49 LTR ERV1 176 300 -623 * 1446 172 38 141 chr17 83581991 83582177 -1856303 + MER4D LTR ERV1 61 265 -638 2368 64 0 7 chr17 83582177 83582475 -1856005 + AluY SINE Alu 1 296 -15 1446 172 38 141 chr17 83582475 83582949 -1855531 + MER4D LTR ERV1 265 787 -116 2186 115 3 0 chr17 83582949 83583254 -1855226 + AluSq SINE Alu 1 306 -7 1323 162 97 127 chr17 83583255 83583719 -1854761 - LTR7 LTR ERV1 0 450 1 1446 172 38 141 chr17 83583719 83583854 -1854626 + MER4D LTR ERV1 786 903 0 2358 178 31 9 chr17 83584283 83584782 -1853698 - MER41B LTR ERV1 -12 597 96 1373 137 52 96 chr17 83585716 83585756 -1852724 - MER1B DNA MER1_type -2384 328 288 2059 118 51 48 chr17 83585756 83586130 -1852350 - THE1C LTR MaLR 0 375 1 1373 137 52 96 chr17 83586130 83586432 -1852048 - MER1B DNA MER1_type -2424 288 1 449 207 12 0 chr17 83586911 83586993 -1851487 + AluJ/FLAM SINE Alu 6 88 -224 467 79 40 0 chr17 83586997 83587073 -1851407 + LTR64 LTR ERVK 480 558 0 233 213 33 0 chr17 83587073 83587128 -1851352 - Charlie5 DNA MER1_type -206 2406 2350 21 0 0 0 chr17 83587223 83587244 -1851236 + AT_rich Low_complexity Low_complexity 1 21 0 1112 108 30 0 chr17 83587409 83587575 -1850905 - AluSg/x SINE Alu -14 298 128 193 209 95 95 chr17 83590113 83590218 -1848262 + MIR SINE MIR 46 150 -112 796 242 22 0 chr17 83591387 83591569 -1846911 + L1M4 LINE L1 2 187 -6355 3392 237 99 8 chr17 83591577 83593074 -1845406 + L1M4 LINE L1 751 2464 -4182 344 358 87 51 chr17 83593205 83593486 -1844994 - L1M4 LINE L1 -824 5322 5022 1969 106 42 0 chr17 83593486 83593769 -1844711 - AluSq SINE Alu -18 295 1 344 358 87 51 chr17 83593769 83593878 -1844602 - L1M4 LINE L1 -1124 5022 4918 1438 208 134 10 chr17 83595852 83596261 -1842219 + MER31A LTR ERV1 8 467 -18 22 0 0 0 chr17 83599756 83599778 -1838702 + GC_rich Low_complexity Low_complexity 1 22 0 1757 155 27 17 chr17 83600574 83600870 -1837610 - AluJo SINE Alu -13 299 1 181 270 48 32 chr17 83600889 83600952 -1837528 + L2 LINE L2 3002 3065 -248 303 326 11 0 chr17 83601835 83601927 -1836553 + MIR SINE MIR 54 146 -116 529 210 62 34 chr17 83601950 83602126 -1836354 - MER53 DNA DNA -8 181 1 1608 153 19 4 chr17 83603258 83603520 -1834960 - AluJb SINE Alu -46 266 1 254 345 118 15 chr17 83603551 83603754 -1834726 + MLT1J LTR MaLR 156 379 -132 233 295 29 64 chr17 83603966 83604139 -1834341 - LTR16B LTR ERVL -2 462 296 258 250 17 0 chr17 83604173 83604233 -1834247 - LTR16B LTR ERVL -236 228 168 2175 231 147 17 chr17 83604498 83605192 -1833288 - MER21B LTR ERV1 -58 805 22 380 333 90 75 chr17 83606328 83606661 -1831819 + L1ME1 LINE L1 5615 5952 -169 681 36 0 0 chr17 83606733 83606817 -1831663 + AluY SINE Alu 216 299 -12 2310 66 0 30 chr17 83608200 83608505 -1829975 - AluY SINE Alu -15 296 1 1957 83 9 124 chr17 83608509 83608848 -1829632 - AluSq SINE Alu -2 301 2 515 278 184 29 chr17 83608903 83609545 -1828935 + L2 LINE L2 2420 3154 -159 994 154 0 0 chr17 83609551 83609754 -1828726 - AluJb SINE Alu 0 337 135 235 325 0 41 chr17 83609756 83609879 -1828601 + L2 LINE L2 3146 3263 -50 203 353 129 0 chr17 83611177 83611262 -1827218 - MIR SINE MIR -77 185 90 651 265 30 0 chr17 83612439 83612639 -1825841 + L1MD3 LINE L1 7672 7877 -118 390 292 14 42 chr17 83612650 83612794 -1825686 + L1ME1 LINE L1 5975 6114 -52 1847 104 65 18 chr17 83612794 83613072 -1825408 - AluSc SINE Alu -18 291 1 1940 125 10 10 chr17 83613087 83613375 -1825105 - AluSx SINE Alu -24 288 1 1869 117 0 0 chr17 83613583 83613840 -1824640 - AluSq SINE Alu -55 258 2 1707 154 0 0 chr17 83613840 83614112 -1824368 + AluJo SINE Alu 27 298 -14 305 359 39 16 chr17 83614622 83614750 -1823730 - L1M4 LINE L1 -2589 3557 3427 229 232 0 18 chr17 83614798 83614854 -1823626 + CT-rich Low_complexity Low_complexity 2 56 0 447 273 9 0 chr17 83614860 83614970 -1823510 - MER58B DNA MER1_type 0 341 231 262 167 0 123 chr17 83615450 83615654 -1822826 + (CACG)n Simple_repeat Simple_repeat 2 180 0 203 263 22 44 chr17 83615639 83615776 -1822704 + (CA)n Simple_repeat Simple_repeat 2 135 0 * 294 231 16 0 chr17 83616431 83616525 -1821955 - L1ME LINE L1 -302 5819 5721 652 193 84 30 chr17 83616557 83616592 -1821888 - MLT2B1 LTR ERVL -7 513 481 369 0 0 0 chr17 83616592 83616633 -1821847 + (CA)n Simple_repeat Simple_repeat 2 42 0 652 193 84 30 chr17 83616633 83616799 -1821681 - MLT2B1 LTR ERVL -39 481 301 784 181 91 25 chr17 83616830 83617029 -1821451 - MLT2B1 LTR ERVL -308 212 1 2008 139 13 7 chr17 83617315 83617625 -1820855 - AluSx SINE Alu 0 312 1 730 252 64 12 chr17 83617634 83617884 -1820596 - L1ME1 LINE L1 -65 6101 5839 932 186 0 0 chr17 83617905 83618061 -1820419 - AluJb SINE Alu -17 295 140 1176 281 23 13 chr17 83618066 83618454 -1820026 - L1ME1 LINE L1 -1011 5135 4744 2148 114 0 13 chr17 83618473 83618772 -1819708 - AluSx SINE Alu -17 295 1 1828 114 11 4 chr17 83618795 83619059 -1819421 - AluSx SINE Alu -3 309 44 916 138 105 33 chr17 83620264 83620474 -1818006 + MER21A LTR ERV1 1 225 -706 1384 208 14 14 chr17 83620475 83620763 -1817717 + AluJo SINE Alu 6 293 -19 1604 170 76 0 chr17 83620769 83621045 -1817435 + AluJo SINE Alu 1 297 -15 2103 168 142 22 chr17 83621141 83621634 -1816846 + MER21A LTR ERV1 378 929 -2 2151 111 0 3 chr17 83621702 83622000 -1816480 + AluSx SINE Alu 1 297 -15 271 291 82 0 chr17 83622302 83622412 -1816068 + L2 LINE L2 3150 3268 -4 21 0 0 0 chr17 83622666 83622687 -1815793 + AT_rich Low_complexity Low_complexity 1 21 0 1782 174 10 3 chr17 83623288 83623598 -1814882 + AluSx SINE Alu 1 312 0 502 302 238 22 chr17 83623617 83624529 -1813951 + L2 LINE L2 2192 3311 -2 183 156 0 0 chr17 83624623 83624655 -1813825 + G-rich Low_complexity Low_complexity 6 37 0 26 30 0 0 chr17 83624761 83624794 -1813686 + GC_rich Low_complexity Low_complexity 1 33 0 420 279 34 0 chr17 83624997 83625144 -1813336 + (CCG)n Simple_repeat Simple_repeat 1 152 0 222 118 0 0 chr17 83625178 83625212 -1813268 + (CGTG)n Simple_repeat Simple_repeat 3 36 0 1367 106 106 66 chr17 83625782 83626055 -1812425 - AluJb SINE Alu -27 285 2 249 230 0 27 chr17 83626142 83626216 -1812264 + LTR37B LTR ERV1 203 274 -194 794 127 14 28 chr17 83626226 83626391 -1812089 - AluJb SINE Alu 0 306 144 2290 87 7 3 chr17 83626550 83626860 -1811620 - AluY SINE Alu 0 311 1 324 0 0 0 chr17 83626864 83626900 -1811580 + (TG)n Simple_repeat Simple_repeat 1 36 0 1968 103 4 0 chr17 83626900 83627163 -1811317 - AluSg SINE Alu -33 277 14 278 240 52 21 chr17 83627195 83627291 -1811189 - Charlie7 DNA MER1_type -2160 452 354 2304 91 0 0 chr17 83627298 83627595 -1810885 + AluSx SINE Alu 1 297 -15 1222 291 119 0 chr17 83627632 83628045 -1810435 - L1MC4 LINE L1 -305 7737 7276 2134 219 74 37 chr17 83628115 83628195 -1810285 - L1M4 LINE L1 -1640 4506 4430 2067 128 0 3 chr17 83628195 83628492 -1809988 - AluSx SINE Alu -16 296 1 2134 219 74 37 chr17 83628492 83629088 -1809392 - L1M4 LINE L1 -1716 4430 3805 1187 213 110 60 chr17 83629142 83629559 -1808921 - L1MC4 LINE L1 -958 7084 6647 180 0 0 0 chr17 83629677 83629697 -1808783 + (T)n Simple_repeat Simple_repeat 1 20 0 1160 145 0 6 chr17 83629711 83629890 -1808590 - AluJo SINE Alu -134 178 1 568 209 72 13 chr17 83629892 83630045 -1808435 - MLT1B LTR MaLR -215 175 14 2135 134 0 0 chr17 83630786 83631092 -1807388 - AluSx SINE Alu -6 306 1 313 322 107 4 chr17 83631290 83631449 -1807031 + L1MD1 LINE L1 5704 5865 -299 1655 180 4 0 chr17 83631619 83631886 -1806594 + AluJo SINE Alu 23 290 -22 536 82 0 0 chr17 83632624 83632697 -1805783 - Alu SINE Alu -13 298 226 288 53 0 0 chr17 83632786 83632824 -1805656 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1792 174 0 0 chr17 83632827 83633109 -1805371 - AluJb SINE Alu -30 282 1 25 51 0 0 chr17 83633135 83633174 -1805306 + AT_rich Low_complexity Low_complexity 1 39 0 771 160 0 0 chr17 83633306 83633437 -1805043 - MER41D LTR ERV1 -426 131 1 496 216 102 28 chr17 83633789 83633965 -1804515 - MLT1D LTR MaLR -316 189 1 349 360 15 0 chr17 83634001 83634137 -1804343 + MIR SINE MIR 123 260 -2 252 314 0 0 chr17 83635771 83635911 -1802569 + (CCCA)n Simple_repeat Simple_repeat 3 142 0 263 286 100 36 chr17 83636318 83636458 -1802022 + L2 LINE L2 2914 3062 -210 1583 145 45 31 chr17 83637102 83637391 -1801089 - AluJo SINE Alu -13 299 7 1288 317 60 64 chr17 83637560 83638582 -1799898 - L1MC4 LINE L1 -201 7841 6836 2308 89 3 10 chr17 83638582 83638896 -1799584 - AluSx SINE Alu 0 312 1 1288 317 60 64 chr17 83638896 83639581 -1798899 - L1MC4 LINE L1 -1206 6836 6150 1995 121 7 3 chr17 83640817 83641114 -1797366 + AluJo SINE Alu 3 300 -12 232 250 17 0 chr17 83642184 83642244 -1796236 + GA-rich Low_complexity Low_complexity 5 65 0 2182 117 7 0 chr17 83642379 83642688 -1795792 + AluSx SINE Alu 1 311 -1 351 345 20 14 chr17 83644118 83644266 -1794214 + L1ME4a LINE L1 5950 6098 -23 1968 118 20 0 chr17 83644797 83645094 -1793386 - AluSx SINE Alu -9 303 1 307 257 0 0 chr17 83645108 83645178 -1793302 - MLT1C LTR MaLR -50 417 348 206 342 25 0 chr17 83646357 83646436 -1792044 + L2 LINE L2 3232 3312 -1 311 181 105 105 chr17 83646532 83646570 -1791910 + MIR SINE MIR 99 135 -127 2181 113 63 33 chr17 83646570 83646934 -1791546 - THE1C LTR MaLR 0 375 1 311 181 105 105 chr17 83646934 83647031 -1791449 + MIR SINE MIR 135 245 -17 206 200 0 0 chr17 83647056 83647091 -1791389 + L2 LINE L2 3221 3255 -17 1882 101 0 0 chr17 83648998 83649269 -1789211 + AluSc SINE Alu 38 309 0 2348 103 0 0 chr17 83649297 83649607 -1788873 + AluSg SINE Alu 1 310 0 491 186 62 23 chr17 83649708 83649837 -1788643 - Charlie8 DNA MER1_type -2222 195 62 2223 118 0 3 chr17 83650981 83651294 -1787186 - AluSx SINE Alu 0 312 1 3161 138 84 2 chr17 83651324 83651811 -1786669 - MER1A DNA MER1_type 0 527 1 289 284 0 0 chr17 83652062 83652143 -1786337 + MER20 DNA MER1_type 100 180 -39 207 0 0 0 chr17 83652198 83652221 -1786259 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 703 235 22 11 chr17 83653416 83653599 -1784881 - MER20 DNA MER1_type -2 217 33 493 198 0 0 chr17 83653594 83653690 -1784790 - MER81 DNA DNA -17 97 2 * 2297 97 0 7 chr17 83653743 83654052 -1784428 + AluSx SINE Alu 1 307 -5 303 291 29 0 chr17 83654167 83654270 -1784210 - MER5A DNA MER1_type -74 115 10 304 279 48 10 chr17 83654321 83654425 -1784055 + MER5B DNA MER1_type 63 170 -8 1212 99 0 0 chr17 83655235 83655397 -1783083 + AluSp SINE Alu 137 298 -15 261 200 0 0 chr17 83655677 83655727 -1782753 - L2 LINE L2 -52 3261 3212 389 169 12 0 chr17 83655983 83656066 -1782414 + CT-rich Low_complexity Low_complexity 1 84 0 235 363 0 44 chr17 83656528 83656641 -1781839 + MIR SINE MIR 27 134 -128 1222 155 111 64 chr17 83656942 83657239 -1781241 + AluJo SINE Alu 1 311 -1 2526 51 0 6 chr17 83657242 83657554 -1780926 + AluY SINE Alu 1 310 -1 2052 100 7 0 chr17 83658027 83658335 -1780145 + AluSx SINE Alu 1 310 0 1355 177 15 2 chr17 83713398 83713476 -1725004 + Tigger7 DNA MER2_type 4 79 -654 2238 110 7 0 chr17 83713476 83713786 -1724694 + AluSx SINE Alu 1 312 0 1355 177 15 2 chr17 83713786 83714113 -1724367 + Tigger7 DNA MER2_type 79 485 -248 1014 126 28 33 chr17 83714104 83714138 -1724342 + Tigger7 DNA MER2_type 2374 2407 -180 * 1249 166 144 37 chr17 83714138 83714269 -1724211 - AluSg SINE Alu -10 300 184 2313 83 0 16 chr17 83714269 83714583 -1723897 - AluY SINE Alu 0 311 3 1249 166 144 37 chr17 83714583 83714722 -1723758 - AluSg SINE Alu -126 184 1 1014 126 28 33 chr17 83714722 83714901 -1723579 + Tigger7 DNA MER2_type 2407 2586 -1 2379 152 29 35 chr17 83714901 83714919 -1723561 - L1MB3 LINE L1 -25 6158 6141 2008 128 3 10 chr17 83714919 83715215 -1723265 - AluSx SINE Alu -18 294 1 2379 152 29 35 chr17 83715215 83715532 -1722948 - L1MB3 LINE L1 -42 6141 5825 2157 108 0 19 chr17 83715532 83715839 -1722641 + AluSg SINE Alu 1 301 -9 2379 152 29 35 chr17 83715839 83716015 -1722465 - L1MB3 LINE L1 -358 5825 5649 2291 92 0 0 chr17 83716690 83716994 -1721486 + AluSx SINE Alu 1 304 -8 5299 181 53 51 chr17 83717581 83718048 -1720432 - L1MB7 LINE L1 -30 6154 5689 2273 82 0 0 chr17 83718048 83718353 -1720127 - AluSx SINE Alu 0 305 1 5299 181 53 51 chr17 83718353 83718605 -1719875 - L1MB7 LINE L1 -495 5689 5439 2264 102 3 0 chr17 83718605 83718908 -1719572 - AluSx SINE Alu -8 304 1 5299 181 53 51 chr17 83718908 83719143 -1719337 - L1MB7 LINE L1 -745 5439 5206 2281 77 34 0 chr17 83719143 83719441 -1719039 - AluY SINE Alu -3 308 1 5299 181 53 51 chr17 83719441 83719707 -1718773 - L1MB7 LINE L1 -978 5206 4942 1920 126 0 43 chr17 83719707 83720009 -1718471 + AluSx SINE Alu 1 289 -23 5299 181 53 51 chr17 83720009 83721282 -1717198 - L1MB7 LINE L1 -1242 4942 3656 197 329 86 24 chr17 83721423 83721633 -1716847 - L2 LINE L2 -210 3062 2840 1393 231 71 16 chr17 83721637 83722074 -1716406 + MLT1C LTR MaLR 6 466 -1 329 284 173 0 chr17 83722398 83722525 -1715955 + MIR SINE MIR 110 258 -4 27 29 0 0 chr17 83722563 83722597 -1715883 + AT_rich Low_complexity Low_complexity 1 34 0 2273 87 0 16 chr17 83722631 83722940 -1715540 + AluSx SINE Alu 1 304 -8 232 321 90 22 chr17 83722948 83723303 -1715177 - L1ME4a LINE L1 -2 6119 5741 823 184 40 0 chr17 83723334 83723486 -1714994 - L1MA10 LINE L1 -1 6333 6176 3458 160 37 41 chr17 83723509 83723737 -1714743 + L1MB3 LINE L1 5077 5304 -879 2143 125 3 3 chr17 83723737 83724049 -1714431 + AluSx SINE Alu 1 312 0 3458 160 37 41 chr17 83724049 83724767 -1713713 + L1MB3 LINE L1 5304 6012 -171 2040 121 0 26 chr17 83724773 83724947 -1713533 - AluSx SINE Alu -7 305 141 2155 72 43 0 chr17 83724947 83725223 -1713257 - AluSq SINE Alu -15 298 11 2040 121 0 26 chr17 83725223 83725361 -1713119 - AluSx SINE Alu -171 141 1 1531 212 26 9 chr17 83725361 83725706 -1712774 - L1ME4a LINE L1 -438 5728 5378 * 2003 194 32 103 chr17 83725702 83726151 -1712329 - L1ME1 LINE L1 -264 5902 5568 1842 147 6 19 chr17 83726151 83726464 -1712016 - AluSx SINE Alu 0 312 4 2003 194 32 103 chr17 83726464 83726925 -1711555 - L1ME1 LINE L1 -598 5568 5076 3901 251 50 21 chr17 83726927 83728280 -1710200 - L1ME4a LINE L1 -850 5296 3904 494 291 46 53 chr17 83728273 83728423 -1710057 - L1ME LINE L1 -424 5697 5547 * 2335 70 7 7 chr17 83728423 83728724 -1709756 + AluSq SINE Alu 1 301 -12 494 291 46 53 chr17 83728724 83729009 -1709471 - L1ME LINE L1 -574 5547 5265 2596 168 54 46 chr17 83729078 83729692 -1708788 - L1MC1 LINE L1 0 6333 5715 455 281 169 45 chr17 83730322 83730387 -1708093 - MLT1H LTR MaLR 0 549 493 2010 156 0 0 chr17 83730387 83730695 -1707785 + AluJb SINE Alu 1 308 -4 455 281 169 45 chr17 83730695 83731075 -1707405 - MLT1H LTR MaLR -56 493 7 2244 107 7 0 chr17 83732872 83733181 -1705299 + AluSx SINE Alu 2 312 0 1013 228 43 24 chr17 83733321 83733575 -1704905 + MIR SINE MIR 4 262 0 309 309 0 0 chr17 83733747 83733831 -1704649 - MIR SINE MIR -105 157 74 2311 87 0 7 chr17 83738612 83738912 -1699568 - AluSx SINE Alu -14 298 1 2174 122 6 35 chr17 83740447 83740792 -1697688 + MER1B DNA MER1_type 3 337 0 180 0 0 0 chr17 83743360 83743380 -1695100 + (TGGGGG)n Simple_repeat Simple_repeat 3 22 0 268 368 65 0 chr17 83744502 83744657 -1693823 - MIR SINE MIR -82 180 16 216 200 0 0 chr17 83746929 83746979 -1691501 + (CGTG)n Simple_repeat Simple_repeat 1 50 0 280 255 255 17 chr17 83747874 83748219 -1690261 - MLT1H LTR MaLR -16 533 107 537 92 0 0 chr17 83750000 83750076 -1688404 + (CA)n Simple_repeat Simple_repeat 1 76 0 252 219 40 10 chr17 83750388 83750463 -1688017 + MIR SINE MIR 90 164 -63 183 42 0 0 chr17 83751172 83751196 -1687284 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 354 123 0 0 chr17 83756867 83756924 -1681556 + (GGGGA)n Simple_repeat Simple_repeat 3 59 0 181 191 43 43 chr17 83758068 83758115 -1680365 + MIR SINE MIR 77 123 -85 235 267 29 29 chr17 83758434 83758539 -1679941 + C-rich Low_complexity Low_complexity 1 105 0 464 224 44 0 chr17 83759720 83759834 -1678646 + MIR SINE MIR 48 165 -62 2168 114 0 7 chr17 83762870 83763177 -1675303 - AluSx SINE Alu -7 305 1 1057 193 75 4 chr17 83763188 83763416 -1675064 - L1MB5 LINE L1 -8 6166 5923 2074 125 0 3 chr17 83763445 83763756 -1674724 + AluSx SINE Alu 1 310 -2 384 280 87 41 chr17 83763756 83763974 -1674506 + MIR SINE MIR 28 255 -7 188 211 173 0 chr17 83764155 83764207 -1674273 + MIR SINE MIR 114 174 -88 445 193 0 11 chr17 83765221 83765309 -1673171 - MIR SINE MIR -113 149 63 197 301 73 49 chr17 83767253 83767376 -1671104 - MIR3 SINE MIR -69 139 14 190 307 45 11 chr17 83767372 83767460 -1671020 + MIR SINE MIR 61 151 -57 * 453 180 0 0 chr17 83769011 83769100 -1669380 + (CA)n Simple_repeat Simple_repeat 2 90 0 1239 200 15 19 chr17 83770036 83770306 -1668174 + L1MB8 LINE L1 5907 6175 -3 477 76 0 0 chr17 83771595 83771661 -1666819 + (TGAA)n Simple_repeat Simple_repeat 1 66 0 471 272 24 0 chr17 83772440 83772565 -1665915 + MIR3 SINE MIR 44 171 -37 237 274 11 0 chr17 83772606 83772701 -1665779 + (CAGGG)n Simple_repeat Simple_repeat 5 100 0 340 297 94 31 chr17 83773970 83774256 -1664224 + LTR16A LTR ERVL 145 448 -2 1254 243 73 36 chr17 83774393 83774804 -1663676 + MLT1C LTR MaLR 42 467 0 842 208 16 16 chr17 83775470 83775662 -1662818 + MER45B DNA AcHobo 406 597 -443 567 249 157 0 chr17 83775910 83776127 -1662353 + L1MC3 LINE L1 7181 7431 -354 1971 134 3 31 chr17 83776127 83776448 -1662032 + AluSx SINE Alu 1 312 0 1061 204 117 0 chr17 83776448 83776722 -1661758 + L1MC3 LINE L1 7472 7777 -8 586 293 106 55 chr17 83776737 83777296 -1661184 + L1ME4a LINE L1 5312 5898 -223 3604 221 48 61 chr17 83777338 83777462 -1661018 + MER45B DNA AcHobo 1 125 -1456 1340 188 18 25 chr17 83777462 83777671 -1660809 + AluJb SINE Alu 5 214 -98 1869 70 0 23 chr17 83777671 83777962 -1660518 - AluY SINE Alu 0 313 29 1340 188 18 25 chr17 83777962 83777973 -1660507 + AluJb SINE Alu 214 224 -88 2046 131 0 28 chr17 83777973 83778294 -1660186 - AluSx SINE Alu 0 312 1 1340 188 18 25 chr17 83778294 83778353 -1660127 + AluJb SINE Alu 224 284 -28 3604 221 48 61 chr17 83778353 83779239 -1659241 + MER45B DNA AcHobo 125 998 -42 256 284 0 34 chr17 83779531 83779608 -1658872 + ERVL LTR ERVL 1473 1548 -3448 2290 100 3 0 chr17 83779608 83779919 -1658561 + AluSx SINE Alu 1 312 0 1672 113 0 0 chr17 83779952 83780183 -1658297 + AluSg1 SINE Alu 1 231 -78 1179 292 135 8 chr17 83780261 83780765 -1657715 + ERVL LTR ERVL 1571 2138 -2858 1346 198 128 30 chr17 83780856 83781185 -1657295 - MLT1A1 LTR MaLR -4 361 1 2010 181 32 98 chr17 83781185 83781717 -1656763 + MLT1D LTR MaLR 9 505 0 621 268 121 5 chr17 83781843 83782033 -1656447 - HERV16 LTR ERVL -3069 1927 1716 1474 296 43 11 chr17 83782044 83782484 -1655996 + ERVL LTR ERVL 2378 2831 -2165 2113 95 21 0 chr17 83782489 83782774 -1655706 + AluSx SINE Alu 1 291 -21 479 333 64 0 chr17 83783068 83783272 -1655208 + ERVL LTR ERVL 3249 3465 -2020 2113 106 19 13 chr17 83783279 83783765 -1654715 + AluSq SINE Alu 1 488 0 832 144 17 17 chr17 83783771 83783951 -1654529 + GA-rich Low_complexity Low_complexity 1 180 0 1006 364 35 11 chr17 83784098 83784815 -1653665 + ERVL LTR ERVL 4533 5322 -205 1441 221 164 23 chr17 83784914 83785353 -1653127 + MLT1D LTR MaLR 5 505 0 668 247 82 56 chr17 83785499 83785719 -1652761 + LTR16A LTR ERVL 92 326 -124 1855 158 7 0 chr17 83785719 83786022 -1652458 - AluJb SINE Alu -7 305 1 668 247 82 56 chr17 83786022 83786141 -1652339 + LTR16A LTR ERVL 326 440 -10 478 315 128 44 chr17 83786151 83786535 -1651945 + L1MC4a LINE L1 4877 5292 -854 293 235 39 10 chr17 83786538 83786640 -1651840 + L1MC4a LINE L1 5297 5401 -2407 * 763 170 13 33 chr17 83786640 83786793 -1651687 - L1MB5 LINE L1 0 6174 6025 3342 172 36 12 chr17 83786793 83787463 -1651017 - L1MB5 LINE L1 -248 5926 5235 2045 159 47 19 chr17 83787463 83787828 -1650652 + THE1C LTR MaLR 1 375 0 3342 172 36 12 chr17 83787828 83787967 -1650513 - L1MB5 LINE L1 -939 5235 5101 696 311 82 48 chr17 83787971 83788131 -1650349 + L1MC4a LINE L1 5392 5545 -2263 1729 134 54 14 chr17 83788131 83788408 -1650072 - AluJb SINE Alu -24 288 1 696 311 82 48 chr17 83788408 83788432 -1650048 + L1MC4a LINE L1 5545 5567 -2241 2045 130 0 0 chr17 83788432 83788739 -1649741 - AluSx SINE Alu -5 307 1 696 311 82 48 chr17 83788739 83789115 -1649365 + L1MC4a LINE L1 5567 5972 -1836 487 221 46 30 chr17 83789189 83789320 -1649160 + MER45A DNA AcHobo 1 117 -61 3562 129 19 95 chr17 83789320 83789432 -1649048 - L1MB3 LINE L1 -16 6167 6048 2156 101 7 0 chr17 83789432 83789729 -1648751 - AluSq SINE Alu -14 299 1 3562 129 19 95 chr17 83789729 83790132 -1648348 - L1MB3 LINE L1 -135 6048 5616 1842 136 0 11 chr17 83790132 83790411 -1648069 + AluJb SINE Alu 26 301 -11 1789 141 18 3 chr17 83790421 83790705 -1647775 + AluSx SINE Alu 12 299 -13 3562 129 19 95 chr17 83790705 83790730 -1647750 - L1MB3 LINE L1 -576 5607 5582 1497 202 18 72 chr17 83790730 83791116 -1647364 - MLT1A1 LTR MaLR 0 365 1 3562 129 19 95 chr17 83791116 83791349 -1647131 - L1MB3 LINE L1 -601 5582 5443 1277 165 150 15 chr17 83791349 83791615 -1646865 - AluSg SINE Alu -8 302 1 3562 129 19 95 chr17 83791615 83791648 -1646832 - L1MB3 LINE L1 -740 5443 5409 266 157 39 0 chr17 83791648 83791699 -1646781 + MER45A DNA AcHobo 102 154 -24 340 227 7 7 chr17 83792363 83792504 -1645976 + (ATG)n Simple_repeat Simple_repeat 1 141 0 1389 77 0 0 chr17 83792562 83792846 -1645634 + (ATG)n Simple_repeat Simple_repeat 1 284 0 297 336 99 0 chr17 83793262 83793393 -1645087 - MIR SINE MIR -8 254 111 208 343 36 14 chr17 83795150 83795290 -1643190 + L2 LINE L2 2725 2867 -447 1852 239 73 32 chr17 83796042 83796503 -1641977 + L1MB5 LINE L1 5587 6077 -97 2225 87 6 3 chr17 83796503 83796814 -1641666 + AluSx SINE Alu 1 312 0 1852 239 73 32 chr17 83796814 83796917 -1641563 + L1MB5 LINE L1 6077 6174 0 364 351 7 0 chr17 83796917 83797071 -1641409 + (TAG)n Simple_repeat Simple_repeat 2 156 0 2006 218 40 28 chr17 83797214 83797686 -1640794 - MLT2B3 LTR ERVL 0 554 77 1668 167 0 52 chr17 83798277 83798606 -1639874 + AluJb SINE Alu 1 312 0 1278 262 95 64 chr17 83798728 83799431 -1639049 + L2 LINE L2 2180 2904 -410 797 251 44 110 chr17 83799448 83799975 -1638505 + L2 LINE L2 2815 3306 -7 2250 107 3 0 chr17 83800152 83800462 -1638018 - AluSx SINE Alu -1 311 1 3864 219 41 79 chr17 83800462 83800856 -1637624 + L1ME1 LINE L1 3912 4320 -1846 1978 106 53 0 chr17 83800856 83801138 -1637342 + AluSx SINE Alu 1 297 -15 3864 219 41 79 chr17 83801138 83801168 -1637312 + L1ME1 LINE L1 4320 4350 -1816 2426 77 0 0 chr17 83801168 83801479 -1637001 + AluY SINE Alu 1 311 0 3864 219 41 79 chr17 83801479 83801749 -1636731 + L1ME1 LINE L1 4350 4629 -1537 1461 152 34 71 chr17 83801749 83802046 -1636434 - AluJb SINE Alu -13 299 14 3864 219 41 79 chr17 83802046 83802307 -1636173 + L1ME1 LINE L1 4629 4899 -1267 2114 128 21 53 chr17 83802307 83802683 -1635797 - THE1B LTR MaLR 0 364 1 3864 219 41 79 chr17 83802683 83802958 -1635522 + L1ME1 LINE L1 4899 5183 -983 2084 162 100 0 chr17 83802958 83803347 -1635133 + MSTA LTR MaLR 1 428 0 3864 219 41 79 chr17 83803347 83803388 -1635092 + L1ME1 LINE L1 5183 5224 -942 180 77 0 0 chr17 83803388 83803414 -1635066 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 756 200 6 33 chr17 83803415 83803517 -1634963 + L1MB8 LINE L1 5998 6094 -84 2740 127 38 2 chr17 83803517 83803935 -1634545 - Tigger2a DNA MER2_type -1 433 1 756 200 6 33 chr17 83803935 83804012 -1634468 + L1MB8 LINE L1 6094 6172 -6 3864 219 41 79 chr17 83804012 83804236 -1634244 + L1ME1 LINE L1 5224 5455 -711 243 88 0 0 chr17 83804236 83804270 -1634210 + (TA)n Simple_repeat Simple_repeat 2 35 0 3864 219 41 79 chr17 83804270 83805101 -1633379 + L1ME1 LINE L1 5455 6156 -10 1770 81 147 8 chr17 83805102 83805361 -1633119 + AluSx SINE Alu 1 295 -7 2291 84 0 16 chr17 83805421 83805730 -1632750 + AluSc SINE Alu 1 304 -5 1487 171 7 58 chr17 83806099 83806250 -1632230 - AluJb SINE Alu -28 284 154 1845 138 13 33 chr17 83806250 83806555 -1631925 - AluSx SINE Alu -13 299 1 1487 171 7 58 chr17 83806555 83806604 -1631876 - AluJb SINE Alu -158 154 8 654 132 0 0 chr17 83806604 83806695 -1631785 - AluJ/FLAM SINE Alu -214 98 8 2304 103 3 0 chr17 83806822 83807133 -1631347 - AluSx SINE Alu 0 312 1 497 322 50 34 chr17 83807142 83807462 -1631018 - L1ME LINE L1 -466 5696 5372 848 277 83 29 chr17 83808701 83809095 -1629385 + L1MDa LINE L1 3 543 -6000 3461 207 81 57 chr17 83809160 83809385 -1629095 + L1MDa LINE L1 794 1012 -5528 1940 129 0 7 chr17 83809385 83809700 -1628780 - AluJb SINE Alu 0 319 7 3461 207 81 57 chr17 83809700 83810236 -1628244 + L1MDa LINE L1 1012 1534 -5006 2291 85 3 0 chr17 83810236 83810542 -1627938 + AluSx SINE Alu 1 307 -5 3461 207 81 57 chr17 83810542 83811079 -1627401 + L1MDa LINE L1 1534 2057 -4483 2134 99 0 0 chr17 83811079 83811400 -1627080 + AluSx SINE Alu 1 321 0 3461 207 81 57 chr17 83811400 83811563 -1626917 + L1MDa LINE L1 2057 2215 -4325 1674 176 52 0 chr17 83811563 83811677 -1626803 + AluJb SINE Alu 5 112 -200 180 0 0 0 chr17 83811677 83811697 -1626783 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1674 176 52 0 chr17 83811697 83811871 -1626609 + AluJb SINE Alu 112 308 -4 3461 207 81 57 chr17 83811871 83812235 -1626245 + L1MDa LINE L1 2215 2647 -3893 3422 207 80 35 chr17 83812243 83812438 -1626042 + L1MD2 LINE L1 5342 5527 -832 2134 119 30 0 chr17 83812438 83812741 -1625739 + AluSx SINE Alu 1 312 0 3422 207 80 35 chr17 83812741 83812907 -1625573 + L1MD2 LINE L1 5527 5684 -675 1911 158 7 7 chr17 83812907 83813217 -1625263 + AluJo SINE Alu 1 310 -2 3422 207 80 35 chr17 83813217 83813827 -1624653 + L1MD2 LINE L1 5684 6358 -1 569 239 0 0 chr17 83813840 83813953 -1624527 + FLAM_C SINE Alu 30 142 -1 607 153 15 0 chr17 83813953 83814084 -1624396 + G-rich Low_complexity Low_complexity 1 133 0 1079 149 12 0 chr17 83814084 83814252 -1624228 + AluJb SINE Alu 133 302 -10 432 245 9 0 chr17 83815121 83815227 -1623253 - MER45A DNA AcHobo -12 166 60 286 258 0 0 chr17 83816258 83816320 -1622160 + G-rich Low_complexity Low_complexity 5 66 0 2090 114 7 13 chr17 83816534 83816840 -1621640 + AluSx SINE Alu 1 304 -8 480 222 189 0 chr17 83817611 83817764 -1620716 - MER53 DNA DNA -6 183 2 1886 147 6 10 chr17 83817811 83818152 -1620328 - AluJo SINE Alu 0 340 1 1975 136 0 10 chr17 83818226 83818528 -1619952 - AluSx SINE Alu -6 306 8 321 273 67 27 chr17 83818626 83818704 -1619776 + L1ME4a LINE L1 5962 6035 -86 974 82 11 33 chr17 83818704 83818886 -1619594 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 321 273 67 27 chr17 83818886 83818957 -1619523 + L1ME4a LINE L1 6035 6117 -4 1864 132 40 10 chr17 83818980 83819283 -1619197 + AluJb SINE Alu 1 312 0 954 118 0 0 chr17 83819741 83819877 -1618603 + AluSp SINE Alu 1 136 -177 2418 66 0 0 chr17 83819877 83820179 -1618301 + AluY SINE Alu 1 302 -9 492 254 15 23 chr17 83821187 83821317 -1617163 - MER63 DNA MER1_type -81 755 1 2200 115 3 0 chr17 83821716 83822021 -1616459 - AluSx SINE Alu -6 306 1 2197 84 0 59 chr17 83822294 83822617 -1615863 - AluSq SINE Alu -5 308 5 2158 118 3 0 chr17 83822649 83822955 -1615525 + AluSx SINE Alu 1 307 -5 261 274 0 0 chr17 83823746 83823852 -1614628 + (TG)n Simple_repeat Simple_repeat 1 106 0 1310 222 31 41 chr17 83824873 83825177 -1613303 - MLT1C LTR MaLR 0 467 167 2307 97 0 0 chr17 83825177 83825475 -1613005 + AluSx SINE Alu 1 298 -14 1310 222 31 41 chr17 83825475 83825589 -1612891 - MLT1C LTR MaLR -300 167 53 255 222 0 0 chr17 83826316 83826379 -1612101 + (CAGC)n Simple_repeat Simple_repeat 3 65 0 469 252 7 27 chr17 83826828 83826975 -1611505 + MER33 DNA MER1_type 6 149 -175 1210 111 0 0 chr17 83826981 83827153 -1611327 - AluSg/x SINE Alu -8 302 131 626 156 37 9 chr17 83827153 83827262 -1611218 + AluJo/FRAM SINE Alu 181 292 -20 1990 103 33 0 chr17 83827732 83828052 -1610428 - AluSx SINE Alu 0 330 2 945 102 16 0 chr17 83828071 83828198 -1610282 - FLAM_C SINE Alu -2 131 3 814 232 56 11 chr17 83828293 83828694 -1609786 + MLT2B1 LTR ERVL 1 506 -9 237 272 233 0 chr17 83828794 83828897 -1609583 + MIR SINE MIR 123 249 -13 2175 105 0 10 chr17 83828919 83829214 -1609266 + AluSq SINE Alu 5 296 -17 626 228 164 62 chr17 83829310 83829700 -1608780 - MLT1C LTR MaLR -33 434 5 331 235 78 26 chr17 83829778 83829893 -1608587 + MIR SINE MIR 100 220 -42 795 143 8 0 chr17 83829983 83830102 -1608378 + AluJb SINE Alu 3 122 -190 387 0 0 0 chr17 83830102 83830145 -1608335 + (CA)n Simple_repeat Simple_repeat 2 44 0 189 333 231 0 chr17 83830294 83830402 -1608078 + MIR3 SINE MIR 23 155 -53 605 338 56 9 chr17 83831251 83831467 -1607013 - MIR SINE MIR 0 262 37 359 323 74 9 chr17 83831704 83831921 -1606559 + L2 LINE L2 2723 2953 -361 2508 205 35 110 chr17 83832590 83832654 -1605826 + MER63C DNA MER1_type 9 76 -984 396 0 0 0 chr17 83832654 83832698 -1605782 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2508 205 35 110 chr17 83832698 83832714 -1605766 + MER63C DNA MER1_type 76 92 -968 2052 100 3 7 chr17 83832714 83833004 -1605476 + AluSx SINE Alu 1 289 -23 2508 205 35 110 chr17 83833004 83833076 -1605404 + MER63C DNA MER1_type 92 168 -892 2106 129 3 0 chr17 83833076 83833387 -1605093 + AluSp SINE Alu 1 312 -1 2508 205 35 110 chr17 83833387 83833694 -1604786 + MER63C DNA MER1_type 168 496 -564 1778 178 0 10 chr17 83833694 83834008 -1604472 + AluJo SINE Alu 1 311 -1 2508 205 35 110 chr17 83834008 83834056 -1604424 + MER63C DNA MER1_type 496 546 -514 2355 79 0 25 chr17 83834056 83834374 -1604106 - AluSq SINE Alu -3 310 1 2508 205 35 110 chr17 83834374 83834847 -1603633 + MER63C DNA MER1_type 546 919 -11 934 325 62 13 chr17 83834886 83835390 -1603090 - L2 LINE L2 -4 3309 2779 2159 112 3 31 chr17 83835898 83836219 -1602261 + AluSx SINE Alu 1 312 0 455 234 95 0 chr17 83836608 83836745 -1601735 + MER45A DNA AcHobo 1 150 -28 301 226 16 65 chr17 83838786 83838846 -1599634 + ORSL DNA AcHobo 33 85 -190 2037 112 16 20 chr17 83838846 83839150 -1599330 + AluSq SINE Alu 1 303 -10 301 226 16 65 chr17 83839150 83839213 -1599267 + ORSL DNA AcHobo 85 150 -125 2155 130 3 0 chr17 83839220 83839528 -1598952 + AluSx SINE Alu 1 309 -3 1656 157 62 3 chr17 83839528 83839866 -1598614 + L1MB3 LINE L1 5819 6176 -7 25 0 0 0 chr17 83842155 83842180 -1596300 + GC_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr17 83845882 83845920 -1592560 + GC_rich Low_complexity Low_complexity 1 38 0 349 224 8 32 chr17 83846112 83846237 -1592243 + C-rich Low_complexity Low_complexity 2 123 0 280 208 32 24 chr17 83846420 83846545 -1591935 + (CGG)n Simple_repeat Simple_repeat 2 127 0 208 237 11 32 chr17 83846637 83846730 -1591750 + (CGGGG)n Simple_repeat Simple_repeat 1 91 0 278 247 0 46 chr17 83846823 83846973 -1591507 + G-rich Low_complexity Low_complexity 1 204 0 327 105 0 0 chr17 83851326 83851383 -1587097 + (CCA)n Simple_repeat Simple_repeat 3 59 0 237 108 0 0 chr17 83851675 83851712 -1586768 + (CGG)n Simple_repeat Simple_repeat 1 37 0 180 0 0 0 chr17 83852530 83852550 -1585930 + (A)n Simple_repeat Simple_repeat 1 20 0 197 235 71 82 chr17 83854163 83854248 -1584232 - MIR SINE MIR -59 149 66 840 203 5 36 chr17 83855470 83855662 -1582818 + MER53 DNA DNA 3 188 -1 195 271 0 0 chr17 83855684 83855732 -1582748 - L2 LINE L2 -84 3188 3141 649 284 121 9 chr17 83856703 83856918 -1581562 - MIR SINE MIR -1 261 23 342 0 0 0 chr17 83857260 83857298 -1581182 + (TG)n Simple_repeat Simple_repeat 1 38 0 216 0 0 0 chr17 83857297 83857321 -1581159 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 2180 126 0 0 chr17 83857679 83857988 -1580492 - AluSq SINE Alu -2 311 3 183 238 63 48 chr17 83858156 83858219 -1580261 + MIR SINE MIR 199 262 0 272 180 0 33 chr17 83858294 83858355 -1580125 + MER4-int LTR ERV1 1102 1160 -5438 540 281 0 0 chr17 83858358 83858536 -1579944 + (TG)n Simple_repeat Simple_repeat 1 178 0 423 263 113 25 chr17 83859611 83859771 -1578709 + MIR3 SINE MIR 24 197 -11 295 263 42 11 chr17 83860178 83860273 -1578207 - MIR3 SINE MIR 0 208 111 248 333 36 0 chr17 83861101 83861212 -1577268 + (CAGAGA)n Simple_repeat Simple_repeat 5 119 0 2611 88 0 40 chr17 83861377 83861406 -1577074 + L1PA13 LINE L1 5801 5830 -333 1904 151 0 41 chr17 83861406 83861541 -1576939 + AluSx SINE Alu 1 140 -172 2498 52 3 0 chr17 83861541 83861851 -1576629 + AluY SINE Alu 1 311 0 1904 151 0 41 chr17 83861851 83862034 -1576446 + AluSx SINE Alu 140 306 -6 2611 88 0 40 chr17 83862034 83862271 -1576209 + L1PA13 LINE L1 5830 6050 -113 2378 67 0 0 chr17 83862271 83862569 -1575911 + AluY SINE Alu 1 298 -13 2611 88 0 40 chr17 83862569 83862677 -1575803 + L1PA13 LINE L1 6050 6161 -2 1251 277 83 39 chr17 83862689 83863200 -1575280 + L1MC4 LINE L1 7368 7855 -187 2013 81 51 4 chr17 83863200 83863473 -1575007 + AluSq SINE Alu 1 286 -27 375 41 0 0 chr17 83863473 83863522 -1574958 + (CA)n Simple_repeat Simple_repeat 2 50 0 1251 277 83 39 chr17 83863522 83863633 -1574847 + L1MC4 LINE L1 7854 8019 -23 212 170 96 85 chr17 83864009 83864103 -1574377 + MIR3 SINE MIR 4 98 -110 * 557 313 157 18 chr17 83864073 83864405 -1574075 + L2 LINE L2 2935 3312 -1 191 185 0 37 chr17 83864435 83864489 -1573991 + GA-rich Low_complexity Low_complexity 5 56 0 1940 125 11 0 chr17 83864854 83865158 -1573322 + AluSx SINE Alu 1 307 0 312 312 94 22 chr17 83866455 83866593 -1571887 + L2 LINE L2 3125 3272 0 189 74 0 0 chr17 83866775 83866802 -1571678 + (TC)n Simple_repeat Simple_repeat 2 28 0 593 320 66 18 chr17 83867015 83867243 -1571237 - MIR SINE MIR -1 261 23 256 250 54 65 chr17 83867386 83867478 -1571002 - MIR3 SINE MIR -3 205 115 295 279 62 70 chr17 83868094 83868223 -1570257 + L2 LINE L2 3145 3272 0 271 243 68 0 chr17 83869137 83869211 -1569269 - L3 LINE CR1 -3 1574 1496 21 0 0 0 chr17 83870556 83870577 -1567903 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 83870932 83870960 -1567520 + GC_rich Low_complexity Low_complexity 1 28 0 48 81 0 0 chr17 83871961 83872072 -1566408 + GC_rich Low_complexity Low_complexity 1 111 0 318 313 6 40 chr17 83873116 83873292 -1565188 + GA-rich Low_complexity Low_complexity 3 172 0 405 95 0 0 chr17 83876093 83876156 -1562324 + (CA)n Simple_repeat Simple_repeat 2 64 0 39 45 3 0 chr17 83876626 83876722 -1561758 + GC_rich Low_complexity Low_complexity 1 67 0 26 30 0 0 chr17 83876994 83877027 -1561453 + GC_rich Low_complexity Low_complexity 1 33 0 238 305 134 12 chr17 83878439 83878521 -1559959 - MIR SINE MIR -94 114 23 368 286 153 15 chr17 83878891 83879087 -1559393 + MIR SINE MIR 35 257 -5 324 0 0 0 chr17 83879496 83879532 -1558948 + (TG)n Simple_repeat Simple_repeat 2 37 0 366 42 0 0 chr17 83880657 83880705 -1557775 + (TC)n Simple_repeat Simple_repeat 1 48 0 342 80 0 0 chr17 83880704 83880754 -1557726 + (CA)n Simple_repeat Simple_repeat 1 50 0 * 1916 118 0 4 chr17 83882507 83882777 -1555703 - AluSx SINE Alu -43 269 1 1649 180 3 10 chr17 83882787 83883081 -1555399 - AluJo SINE Alu -14 298 7 1246 40 0 0 chr17 83883335 83883484 -1554996 - L1PA3 LINE L1 0 6155 6007 2306 97 10 0 chr17 83883491 83883800 -1554680 - AluSx SINE Alu 0 312 1 527 212 124 73 chr17 83884198 83884502 -1553978 - MLT2C1 LTR ERVL -9 388 29 1602 178 31 46 chr17 83885005 83885209 -1553271 - MLT1B LTR MaLR -8 382 176 2330 86 0 13 chr17 83885209 83885524 -1552956 - AluY SINE Alu 0 311 1 1886 120 73 0 chr17 83885528 83885803 -1552677 - AluSx SINE Alu -17 295 1 1602 178 31 46 chr17 83885803 83885981 -1552499 - MLT1B LTR MaLR -217 173 1 209 329 55 0 chr17 83886023 83886096 -1552384 - MIR SINE MIR -4 258 182 2479 115 40 0 chr17 83886176 83886524 -1551956 + THE1B LTR MaLR 1 362 -2 2337 44 0 0 chr17 83886525 83886797 -1551683 + AluY SINE Alu 1 272 -39 24 0 0 0 chr17 83886982 83887006 -1551474 + AT_rich Low_complexity Low_complexity 1 24 0 2257 79 0 22 chr17 83887371 83887688 -1550792 + AluY SINE Alu 1 310 -1 2195 105 3 0 chr17 83887898 83888194 -1550286 - AluSq SINE Alu -16 297 1 1454 229 38 61 chr17 83888195 83888667 -1549813 + MER63 DNA MER1_type 590 1050 -11 934 323 62 13 chr17 83888706 83889210 -1549270 - L2 LINE L2 -4 3309 2779 2178 109 3 28 chr17 83889718 83890038 -1548442 + AluSx SINE Alu 1 312 0 455 234 95 0 chr17 83890427 83890564 -1547916 + MER45A DNA AcHobo 1 150 -28 22 70 0 0 chr17 83893139 83893182 -1545298 + GC_rich Low_complexity Low_complexity 1 43 0 832 248 88 13 chr17 83895459 83895697 -1542783 - MIR SINE MIR -2 260 5 476 265 111 12 chr17 83895985 83896147 -1542333 + MIR SINE MIR 80 257 -5 380 55 18 0 chr17 83898200 83898255 -1540225 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 185 211 18 0 chr17 83899167 83899224 -1539256 + CT-rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr17 83900179 83900201 -1538279 + GC_rich Low_complexity Low_complexity 1 22 0 219 347 0 0 chr17 83900679 83900777 -1537703 + G-rich Low_complexity Low_complexity 1 98 0 213 132 0 0 chr17 83901044 83901082 -1537398 + (CGG)n Simple_repeat Simple_repeat 3 40 0 294 125 0 0 chr17 83902075 83902123 -1536357 + (CCCA)n Simple_repeat Simple_repeat 1 48 0 216 200 0 0 chr17 83902459 83902529 -1535951 + GA-rich Low_complexity Low_complexity 1 70 0 22 56 0 0 chr17 83906286 83906322 -1532158 + GC_rich Low_complexity Low_complexity 1 36 0 790 250 43 10 chr17 83909006 83909214 -1529266 - MER20 DNA MER1_type -4 215 1 24 0 0 0 chr17 83909413 83909437 -1529043 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr17 83909843 83909864 -1528616 + AT_rich Low_complexity Low_complexity 1 21 0 2063 128 0 10 chr17 83910811 83911117 -1527363 - AluSx SINE Alu -2 310 8 332 276 46 20 chr17 83911216 83911300 -1527180 + L1ME4a LINE L1 5962 6053 -68 933 96 11 28 chr17 83911300 83911478 -1527002 + (TTTC)n Simple_repeat Simple_repeat 3 177 0 332 276 46 20 chr17 83911478 83911545 -1526935 + L1ME4a LINE L1 6053 6117 -4 2365 89 0 9 chr17 83911568 83911883 -1526597 + AluSx SINE Alu 1 312 0 998 220 85 11 chr17 83911883 83912165 -1526315 - MLT1D LTR MaLR -53 452 150 538 240 74 13 chr17 83912426 83912616 -1525864 - L1MB8 LINE L1 -9 6162 5952 224 383 0 0 chr17 83912732 83912839 -1525641 + C-rich Low_complexity Low_complexity 1 107 0 848 277 83 29 chr17 83914314 83914708 -1523772 + L1MDa LINE L1 3 543 -6000 2847 196 52 35 chr17 83914773 83914998 -1523482 + L1MDa LINE L1 794 1014 -5529 1940 129 0 7 chr17 83914998 83915313 -1523167 - AluJb SINE Alu 0 319 7 2847 196 52 35 chr17 83915313 83915835 -1522645 + L1MDa LINE L1 1014 1555 -4988 2281 77 34 0 chr17 83915849 83916147 -1522333 + AluY SINE Alu 1 308 -3 815 169 15 9 chr17 83916148 83916382 -1522098 + L1M4 LINE L1 5195 5429 -743 1216 61 7 0 chr17 83916382 83916530 -1521950 + AluSq/x SINE Alu 1 149 -164 234 193 24 24 chr17 83916573 83916656 -1521824 + CT-rich Low_complexity Low_complexity 4 86 0 333 263 10 0 chr17 83917336 83917435 -1521045 - L1MB8 LINE L1 -275 5909 5810 485 130 0 0 chr17 83917435 83917504 -1520976 - AluS SINE Alu -246 72 4 1329 179 133 20 chr17 83917505 83917851 -1520629 - L1MB8 LINE L1 -386 5794 5410 231 224 0 0 chr17 83917881 83917939 -1520541 + Charlie8 DNA MER1_type 91 148 -2269 1820 67 0 0 chr17 83918557 83918782 -1519698 - AluSg/x SINE Alu -9 301 77 742 189 8 104 chr17 83919046 83919271 -1519209 - L1M3 LINE L1 -541 5642 5444 1253 175 152 15 chr17 83919271 83919534 -1518946 - AluSg SINE Alu -11 299 1 742 189 8 104 chr17 83919534 83919567 -1518913 - L1M3 LINE L1 -739 5444 5409 247 157 39 0 chr17 83919567 83919618 -1518862 + MER45A DNA AcHobo 102 154 -24 334 225 7 7 chr17 83920282 83920420 -1518060 + (ATG)n Simple_repeat Simple_repeat 1 138 0 323 289 0 24 chr17 83920472 83920555 -1517925 + (ATGGTG)n Simple_repeat Simple_repeat 3 83 0 207 253 13 27 chr17 83920557 83920632 -1517848 + T-rich Low_complexity Low_complexity 2 75 0 373 273 40 130 chr17 83921917 83922170 -1516310 - L1MC/D LINE L1 -2072 5736 5507 2155 92 0 0 chr17 83922372 83922706 -1515774 + AluSg1 SINE Alu 1 334 0 432 245 9 0 chr17 83923190 83923296 -1515184 + MER45A DNA AcHobo 60 166 -12 227 277 0 12 chr17 83923306 83923389 -1515091 + L1MEc LINE L1 1385 1466 -4930 2357 67 13 0 chr17 83923394 83923694 -1514786 + AluY SINE Alu 1 304 -7 1696 128 16 66 chr17 83923704 83924008 -1514472 + AluSx SINE Alu 12 300 -12 585 188 8 0 chr17 83924033 83924150 -1514330 - MLT1A1 LTR MaLR 0 365 248 1253 164 0 5 chr17 83924275 83924494 -1513986 - L1P3 LINE L1 -6239 222 5 517 198 63 0 chr17 83924504 83924630 -1513850 - L1ME LINE L1 -566 5600 5467 350 273 64 11 chr17 83924620 83924807 -1513673 - L1MEc LINE L1 -4760 1636 1440 * 1593 169 10 29 chr17 83924808 83924996 -1513484 - AluJb SINE Alu -5 307 126 180 0 0 0 chr17 83924996 83925016 -1513464 + (TA)n Simple_repeat Simple_repeat 1 20 0 1593 169 10 29 chr17 83925016 83925140 -1513340 - AluJb SINE Alu -186 126 1 388 125 0 0 chr17 83925175 83925239 -1513241 - MLT1D LTR MaLR 0 505 442 2207 110 0 0 chr17 83925239 83925548 -1512932 + AluY SINE Alu 1 309 -2 426 280 87 41 chr17 83925548 83925766 -1512714 + MIR SINE MIR 28 255 -7 1661 77 5 9 chr17 83926314 83926534 -1511946 - AluSx SINE Alu -93 219 1 27 29 0 0 chr17 83926568 83926602 -1511878 + AT_rich Low_complexity Low_complexity 1 34 0 329 284 173 0 chr17 83926640 83926767 -1511713 - MIR SINE MIR -4 258 110 1086 253 68 27 chr17 83927091 83927534 -1510946 - MLT1C LTR MaLR -1 466 6 1838 150 6 19 chr17 83927855 83928168 -1510312 + AluSx SINE Alu 4 312 0 1607 220 25 10 chr17 83928212 83928617 -1509863 + L1ME1 LINE L1 5492 5902 -264 1367 231 26 12 chr17 83928613 83928959 -1509521 + L1MB5 LINE L1 5378 5728 -438 * 1820 125 3 28 chr17 83928959 83929096 -1509384 + AluSx SINE Alu 1 140 -172 1978 94 47 0 chr17 83929096 83929371 -1509109 + AluSq SINE Alu 11 298 -15 1820 125 3 28 chr17 83929371 83929522 -1508958 + AluSx SINE Alu 140 282 -30 415 91 30 0 chr17 83930021 83930087 -1508393 - L1PA13 LINE L1 -52 6111 6044 342 64 0 0 chr17 83930085 83930132 -1508348 + L1PA14 LINE L1 6017 6063 -98 * 286 266 57 39 chr17 83930129 83930334 -1508146 - L1M4 LINE L1 -2135 4011 3786 * 1983 139 0 13 chr17 83930334 83930504 -1507976 - AluSx SINE Alu -6 306 140 257 0 30 0 chr17 83930504 83930537 -1507943 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1983 139 0 13 chr17 83930537 83930676 -1507804 - AluSx SINE Alu -172 140 1 286 266 57 39 chr17 83930676 83930693 -1507787 - L1M4 LINE L1 -2360 3786 3771 937 211 75 4 chr17 83930705 83930933 -1507547 + L1MB5 LINE L1 5923 6166 -8 1560 158 11 8 chr17 83930944 83931210 -1507270 + AluSx SINE Alu 1 267 -45 26 0 0 0 chr17 83931370 83931396 -1507084 + GC_rich Low_complexity Low_complexity 1 26 0 309 290 17 21 chr17 83931642 83931936 -1506544 + GA-rich Low_complexity Low_complexity 1 292 0 212 143 0 0 chr17 83935886 83935921 -1502559 + (GGA)n Simple_repeat Simple_repeat 2 36 0 2280 109 0 0 chr17 83935979 83936290 -1502190 + AluSx SINE Alu 1 311 -1 226 326 34 11 chr17 83938292 83938381 -1500099 - MIR3 SINE MIR -4 204 114 24 0 0 0 chr17 83941085 83941109 -1497371 + GC_rich Low_complexity Low_complexity 1 24 0 37 175 0 0 chr17 83941210 83941290 -1497190 + GC_rich Low_complexity Low_complexity 1 80 0 219 118 27 75 chr17 83941290 83941477 -1497003 + C-rich Low_complexity Low_complexity 3 180 0 38 55 0 18 chr17 83941477 83941515 -1496965 + GC_rich Low_complexity Low_complexity 1 39 -15 201 39 0 0 chr17 83941515 83941541 -1496939 + (CCCCG)n Simple_repeat Simple_repeat 4 29 0 38 55 0 18 chr17 83941541 83941557 -1496923 + GC_rich Low_complexity Low_complexity 39 54 0 213 229 43 0 chr17 83941560 83941630 -1496850 + C-rich Low_complexity Low_complexity 2 74 0 182 88 0 29 chr17 83941867 83941901 -1496579 + (CGGGG)n Simple_repeat Simple_repeat 4 36 0 261 57 0 0 chr17 83941964 83941999 -1496481 + (CGGGGG)n Simple_repeat Simple_repeat 1 35 0 653 255 0 0 chr17 83944056 83944205 -1494275 + MER3 DNA MER1_type 55 203 -6 1284 169 9 4 chr17 83944373 83944598 -1493882 - AluSx SINE Alu -86 226 1 207 0 0 0 chr17 83944599 83944622 -1493858 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 765 153 6 100 chr17 83944626 83944796 -1493684 - AluJo/FRAM SINE Alu -25 287 134 2168 112 0 3 chr17 83944797 83945091 -1493389 - AluSx SINE Alu -15 297 5 425 309 168 7 chr17 83945250 83945535 -1492945 - HAL1 LINE L1 -789 1718 1388 194 343 53 35 chr17 83946064 83946233 -1492247 - MIR SINE MIR -19 243 72 1399 156 0 5 chr17 83946393 83946611 -1491869 + AluJb SINE Alu 3 219 -93 35 24 0 0 chr17 83946716 83946758 -1491722 + GC_rich Low_complexity Low_complexity 1 42 0 39 22 0 0 chr17 83946839 83946885 -1491595 + GC_rich Low_complexity Low_complexity 1 46 0 222 351 93 15 chr17 83947631 83947836 -1490644 + L2 LINE L2 3080 3300 -13 4807 165 9 11 chr17 83948379 83949332 -1489148 + L1P LINE L1 1575 2526 -3620 210 171 0 24 chr17 83949421 83949462 -1489018 + CT-rich Low_complexity Low_complexity 3 42 0 21 0 0 0 chr17 83950024 83950045 -1488435 + AT_rich Low_complexity Low_complexity 1 21 0 397 283 8 17 chr17 84151230 84151350 -1287130 + GA-rich Low_complexity Low_complexity 1 119 0 402 208 92 16 chr17 84152445 84152603 -1285877 + L1ME2 LINE L1 5576 5738 -426 1817 173 68 149 chr17 84152806 84153552 -1284928 + LTR8A LTR ERV1 34 719 -8 805 243 15 5 chr17 84153567 84153769 -1284711 + L1ME2 LINE L1 5941 6144 -20 527 190 62 99 chr17 84155353 84155535 -1282945 - HsTC2 DNA Tc2 -5 1893 1719 2528 83 0 0 chr17 84155535 84155837 -1282643 - AluSx SINE Alu -10 302 1 527 190 62 99 chr17 84155837 84155865 -1282615 - HsTC2 DNA Tc2 -179 1719 1691 785 160 8 0 chr17 84155879 84156004 -1282476 + FLAM_C SINE Alu 1 126 -7 1301 90 18 0 chr17 84156026 84156193 -1282287 + AluSc SINE Alu 3 172 -137 665 198 0 0 chr17 84156294 84156410 -1282070 + FRAM SINE Alu 31 146 -30 1827 176 10 10 chr17 84156425 84156720 -1281760 + AluJb SINE Alu 1 295 -17 5996 24 7 1 chr17 84157876 84158660 -1279820 + L1PA3 LINE L1 5415 6202 0 29 0 0 0 chr17 84158895 84158924 -1279556 + AT_rich Low_complexity Low_complexity 1 29 0 229 345 58 55 chr17 84159287 84159503 -1278977 - L1MEd LINE L1 -3669 2460 2241 1465 160 0 0 chr17 84159503 84159728 -1278752 - AluJo SINE Alu -1 311 87 229 345 58 55 chr17 84159728 84159841 -1278639 - L1MEd LINE L1 -3888 2241 2130 342 343 80 57 chr17 84159848 84160198 -1278282 - L1MEd LINE L1 -4917 1202 845 671 225 72 72 chr17 84162103 84162176 -1276304 + MER58A DNA MER1_type 1 73 -2347 2507 84 10 0 chr17 84162176 84162484 -1275996 + AluSq SINE Alu 1 311 -2 671 225 72 72 chr17 84162484 84162632 -1275848 + MER58A DNA MER1_type 72 222 -2 387 288 92 0 chr17 84162850 84163003 -1275477 + L1ME4a LINE L1 5952 6118 -3 685 204 8 0 chr17 84163571 84163703 -1274777 - FLAM_A SINE Alu 0 133 1 284 331 0 45 chr17 84164276 84164430 -1274050 + L2 LINE L2 2695 2841 -473 745 127 0 8 chr17 84165052 84165178 -1273302 + L1MA4 LINE L1 6165 6289 -11 361 133 0 0 chr17 84165198 84165258 -1273222 + MSTD LTR MaLR 337 396 0 338 136 34 0 chr17 84165861 84165920 -1272560 - MSTD LTR MaLR 0 396 336 736 99 0 78 chr17 84165931 84166072 -1272408 - L1MA4 LINE L1 -3 6297 6168 908 150 53 21 chr17 84166072 84166259 -1272221 - L1M1 LINE L1 -7357 208 16 733 183 21 38 chr17 84166237 84166423 -1272057 - L1MA4 LINE L1 -106 7613 7431 * 1367 195 129 3 chr17 84166425 84166727 -1271753 - MSTD LTR MaLR -56 340 1 2017 169 0 7 chr17 84167006 84167314 -1271166 - AluSx SINE Alu 0 312 7 840 142 0 8 chr17 84167322 84167456 -1271024 - FLAM_C SINE Alu 0 133 1 2781 17 3 0 chr17 84169122 84169422 -1269058 - AluY SINE Alu -10 301 1 278 252 84 19 chr17 84169603 84169710 -1268770 + L1ME4a LINE L1 6007 6120 -1 22 56 0 0 chr17 84171788 84171824 -1266656 + AT_rich Low_complexity Low_complexity 1 36 0 439 246 18 0 chr17 84171847 84171957 -1266523 - L1MB3 LINE L1 0 6183 6072 750 204 19 0 chr17 84172625 84172782 -1265698 + AluJb SINE Alu 3 162 -150 1655 203 0 10 chr17 84172909 84173210 -1265270 + AluJo SINE Alu 1 298 -14 2022 112 7 0 chr17 84175408 84175711 -1262769 - AluSx SINE Alu 0 309 5 2314 100 3 3 chr17 84176472 84176771 -1261709 - AluSq SINE Alu -14 299 1 213 200 53 53 chr17 84178050 84178220 -1260260 + (CTAGGG)n Simple_repeat Simple_repeat 5 174 0 222 199 53 53 chr17 84178463 84178634 -1259846 + (CTAGGG)n Simple_repeat Simple_repeat 5 175 0 454 275 3 6 chr17 84179690 84180041 -1258439 + (TG)n Simple_repeat Simple_repeat 1 350 0 272 228 7 47 chr17 84180013 84180162 -1258318 + (TATATG)n Simple_repeat Simple_repeat 6 148 0 * 534 309 141 57 chr17 84180251 84181330 -1257150 + L2 LINE L2 1466 2635 -679 1173 206 36 4 chr17 84181480 84181728 -1256752 - L1M4 LINE L1 -550 5628 5373 * 3440 251 71 33 chr17 84181706 84183066 -1255414 - L1M4 LINE L1 -1983 4163 2752 332 336 60 0 chr17 84183200 84183349 -1255131 - L1M4 LINE L1 -1923 4223 4066 1026 148 0 5 chr17 84184032 84184393 -1254087 + (CCA)n Simple_repeat Simple_repeat 1 539 0 212 284 280 14 chr17 84184407 84184445 -1254035 + L2 LINE L2 2549 2576 -738 1125 123 0 0 chr17 84184445 84184624 -1253856 + (CCA)n Simple_repeat Simple_repeat 1 179 0 212 284 280 14 chr17 84184624 84184796 -1253684 + L2 LINE L2 2576 2815 -499 1495 213 113 41 chr17 84187511 84188342 -1250138 + LTR28 LTR ERV1 14 1019 -1 257 356 79 6 chr17 84189789 84189966 -1248514 - MIR SINE MIR -37 225 36 519 271 23 63 chr17 84191644 84191865 -1246615 + MER20 DNA MER1_type 8 219 0 1885 156 7 26 chr17 84192231 84192373 -1246107 + AluJo SINE Alu 1 144 -168 2324 98 3 0 chr17 84192373 84192660 -1245820 + AluSx SINE Alu 1 288 -24 456 19 0 0 chr17 84192660 84192713 -1245767 + (CATAA)n Simple_repeat Simple_repeat 2 54 0 1885 156 7 26 chr17 84192713 84192876 -1245604 + AluJo SINE Alu 142 301 -11 659 245 47 56 chr17 84193208 84193441 -1245039 + L1MC5 LINE L1 6675 6905 -1056 310 216 23 11 chr17 84193484 84193572 -1244908 + (CA)n Simple_repeat Simple_repeat 1 89 0 815 267 97 77 chr17 84193660 84193826 -1244654 + L1MC5 LINE L1 6968 7129 -832 1694 216 0 7 chr17 84193826 84194132 -1244348 + AluJo SINE Alu 1 304 -8 815 267 97 77 chr17 84194132 84194565 -1243915 + L1MC5 LINE L1 7129 7579 -382 240 35 0 0 chr17 84194565 84194594 -1243886 + (TG)n Simple_repeat Simple_repeat 2 30 0 370 227 5 111 chr17 84194605 84194803 -1243677 + L1MC5 LINE L1 7705 7881 -80 201 259 0 19 chr17 84194813 84194867 -1243613 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 308 259 104 15 chr17 84195953 84196088 -1242392 - MER91A DNA MER1_type -3 193 47 295 205 84 24 chr17 84196340 84196423 -1242057 + MLT1L LTR MaLR 307 394 -221 451 176 22 198 chr17 84196566 84196788 -1241692 + MIR SINE MIR 75 257 -5 356 289 14 92 chr17 84198453 84198517 -1239963 + MIR SINE MIR 117 184 -78 1812 25 0 0 chr17 84198517 84198770 -1239710 + AluY SINE Alu 84 336 0 1470 42 0 0 chr17 84198770 84198937 -1239543 + AluY SINE Alu 130 296 -15 356 289 14 92 chr17 84198937 84199012 -1239468 + MIR SINE MIR 182 247 -15 322 185 40 80 chr17 84199434 84199485 -1238995 + L1MC4a LINE L1 5319 5370 -2438 270 0 0 0 chr17 84199485 84199515 -1238965 + (TA)n Simple_repeat Simple_repeat 2 31 0 322 185 40 80 chr17 84199515 84199544 -1238936 + L1MC4a LINE L1 5370 5399 -2409 1510 164 36 33 chr17 84199544 84199818 -1238662 + AluJo SINE Alu 1 275 -37 322 185 40 80 chr17 84199818 84199887 -1238593 + L1MC4a LINE L1 5399 5463 -2345 1225 267 164 31 chr17 84200079 84200476 -1238004 + L1MC4a LINE L1 5512 5855 -1953 2432 55 0 7 chr17 84200476 84200800 -1237680 + AluY SINE Alu 1 322 0 1225 267 164 31 chr17 84200800 84201259 -1237221 + L1MC4a LINE L1 5855 6484 -1324 1754 263 163 12 chr17 84201268 84202103 -1236377 + L1MC4 LINE L1 6771 7749 -293 1820 151 3 47 chr17 84202103 84202421 -1236059 + AluJo SINE Alu 1 304 -8 1754 263 163 12 chr17 84202421 84202474 -1236006 + L1MC4 LINE L1 7749 7793 -249 911 221 90 80 chr17 84202474 84202800 -1235680 - MLT1D LTR MaLR -45 422 110 1679 168 11 7 chr17 84202800 84203080 -1235400 + AluJo SINE Alu 1 281 -31 911 221 90 80 chr17 84203080 84203192 -1235288 - MLT1D LTR MaLR -357 110 1 2107 124 17 0 chr17 84204394 84204693 -1233787 - AluSg SINE Alu -6 304 1 856 106 0 30 chr17 84205811 84205943 -1232537 - AluSg/x SINE Alu -12 297 170 420 93 0 0 chr17 84205943 84205997 -1232483 - AluSq SINE Alu -110 203 150 449 209 108 0 chr17 84206510 84206649 -1231831 - L1MD3 LINE L1 -13 7982 7829 926 149 0 0 chr17 84206649 84206783 -1231697 - AluJo SINE Alu -178 134 1 195 326 88 34 chr17 84207561 84207708 -1230772 - L2 LINE L2 -430 2884 2730 453 301 124 5 chr17 84209717 84210066 -1228414 + L1MEd LINE L1 570 879 -5240 325 167 0 0 chr17 84210213 84210273 -1228207 + HSMAR2 DNA Mariner 1175 1234 -68 1298 75 0 0 chr17 84210274 84210434 -1228046 - AluY SINE Alu -8 303 144 289 294 86 13 chr17 84210562 84210763 -1227717 + MLT1J LTR MaLR 1 264 -247 6714 146 29 31 chr17 84210787 84211865 -1226615 + HSMAR2 DNA Mariner 41 1120 -182 2063 119 34 14 chr17 84211865 84212160 -1226320 + AluSx SINE Alu 1 301 -11 6714 146 29 31 chr17 84212160 84212279 -1226201 + HSMAR2 DNA Mariner 1120 1237 -65 2388 77 0 10 chr17 84212279 84212577 -1225903 - AluY SINE Alu -16 295 1 6714 146 29 31 chr17 84212577 84212642 -1225838 + HSMAR2 DNA Mariner 1237 1301 -1 474 241 45 90 chr17 84212646 84212891 -1225589 + MLT1J LTR MaLR 268 501 -10 252 304 13 13 chr17 84214422 84214501 -1223979 - L2 LINE L2 -53 3219 3141 219 344 119 12 chr17 84214914 84215074 -1223406 + MIR3 SINE MIR 30 206 -2 2420 68 7 0 chr17 84215399 84215695 -1222785 + AluSp SINE Alu 1 298 -15 196 333 10 10 chr17 84217729 84217831 -1220649 + L2 LINE L2 2958 3059 -213 235 245 0 0 chr17 84218374 84218427 -1220053 + L2 LINE L2 3261 3313 0 180 366 108 0 chr17 84218432 84218525 -1219955 + L2 LINE L2 3134 3236 -36 2347 50 7 4 chr17 84219235 84219513 -1218967 + AluY SINE Alu 1 279 -32 860 71 26 26 chr17 84219513 84219667 -1218813 + (GGAAA)n Simple_repeat Simple_repeat 5 158 0 431 293 103 80 chr17 84221451 84221762 -1216718 + HAL1 LINE L1 678 995 -1512 1907 166 7 0 chr17 84222610 84222905 -1215575 - AluJo SINE Alu -15 297 1 1504 199 78 6 chr17 84223734 84224055 -1214425 + MER2 DNA MER2_type 1 344 0 313 279 70 23 chr17 84224309 84224438 -1214042 + HAL1 LINE L1 1639 1773 -734 497 270 35 39 chr17 84225201 84225431 -1213049 + HAL1 LINE L1 2273 2501 -6 21 0 0 0 chr17 84226894 84226915 -1211565 + AT_rich Low_complexity Low_complexity 1 21 0 1445 208 7 17 chr17 84227619 84227913 -1210567 + AluJb SINE Alu 1 291 -21 2219 103 7 0 chr17 84228391 84228683 -1209797 + AluSx SINE Alu 1 294 -18 498 269 67 21 chr17 84229936 84230218 -1208262 + L1MC/D LINE L1 4550 4844 -1302 234 0 0 0 chr17 84230323 84230349 -1208131 + (CA)n Simple_repeat Simple_repeat 2 27 0 302 242 177 24 chr17 84230614 84230738 -1207742 + L1MC/D LINE L1 5315 5457 -2351 345 100 0 0 chr17 84230739 84230789 -1207691 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 386 273 174 12 chr17 84230789 84231055 -1207425 + L1MC/D LINE L1 5442 5747 -460 277 274 280 6 chr17 84231057 84231214 -1207266 + MLT1J2 LTR MaLR 1 143 -307 366 213 180 60 chr17 84232708 84232891 -1205589 - MER20 DNA MER1_type -14 205 1 2585 251 140 21 chr17 84235025 84236132 -1202348 + L1MC4a LINE L1 6648 7801 -7 32 26 0 0 chr17 84236717 84236756 -1201724 + AT_rich Low_complexity Low_complexity 1 39 0 288 254 47 78 chr17 84237906 84238099 -1200381 + MER5A DNA MER1_type 1 187 -2 2035 73 42 17 chr17 84238493 84238780 -1199700 - AluSq SINE Alu -19 294 1 286 321 29 58 chr17 84241403 84241540 -1196940 - L2 LINE L2 -8 3305 3173 6136 137 25 5 chr17 84241660 84243201 -1195279 + L1PB1 LINE L1 4582 6150 -1 338 302 21 10 chr17 84243264 84243360 -1195120 - L2 LINE L2 -21 3292 3196 2481 238 71 95 chr17 84243387 84243779 -1194701 - L1M4 LINE L1 -2673 3473 3073 1825 138 3 7 chr17 84243779 84244069 -1194411 + AluSx SINE Alu 1 289 -23 2481 238 71 95 chr17 84244069 84244561 -1193919 - L1M4 LINE L1 -3073 3073 2629 2121 99 0 7 chr17 84244561 84244855 -1193625 + AluSq SINE Alu 1 292 -21 2481 238 71 95 chr17 84244855 84245287 -1193193 - L1M4 LINE L1 -3517 2629 2188 4306 212 74 8 chr17 84245373 84245456 -1193024 + L1MC2 LINE L1 5181 5257 -1087 1792 102 92 11 chr17 84245456 84245739 -1192741 + AluSq SINE Alu 1 306 -7 4306 212 74 8 chr17 84245739 84246754 -1191726 + L1MC2 LINE L1 5257 6344 0 2227 96 0 3 chr17 84246759 84247071 -1191409 + AluSx SINE Alu 2 312 0 21 0 0 0 chr17 84247117 84247138 -1191342 + AT_rich Low_complexity Low_complexity 1 21 0 791 322 75 41 chr17 84247522 84248209 -1190271 + L1 LINE L1 3185 3916 -2230 405 0 0 0 chr17 84248209 84248254 -1190226 + (CA)n Simple_repeat Simple_repeat 2 46 0 791 322 75 41 chr17 84248254 84248522 -1189958 + L1 LINE L1 3916 4173 -1973 1806 131 3 58 chr17 84248528 84248841 -1189639 + AluJb SINE Alu 1 296 -16 189 264 132 99 chr17 84250979 84251053 -1187427 + MIR SINE MIR 61 142 -120 1363 188 50 14 chr17 84251053 84251335 -1187145 + AluJo SINE Alu 2 293 -19 189 264 132 99 chr17 84251335 84251381 -1187099 + MIR SINE MIR 142 185 -77 470 309 59 26 chr17 84251671 84251975 -1186505 + L1 LINE L1 4294 4607 -1539 763 145 7 35 chr17 84252910 84253055 -1185425 + FLAM_C SINE Alu 2 142 -1 221 28 83 0 chr17 84256483 84256519 -1181961 + A-rich Low_complexity Low_complexity 2 40 0 328 331 17 35 chr17 84257700 84257872 -1180608 + L2 LINE L2 2430 2598 -716 1067 121 0 16 chr17 84257873 84257932 -1180548 + (CACCAT)n Simple_repeat Simple_repeat 1 237 0 1067 121 0 16 chr17 84257932 84258114 -1180366 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 522 129 12 0 chr17 84258368 84258453 -1180027 + AluSc SINE Alu 210 295 -14 1174 122 12 0 chr17 84258454 84258626 -1179854 + AluJb SINE Alu 121 294 -18 279 240 48 48 chr17 84258628 84258753 -1179727 - HsTC2 DNA Tc2 -219 1679 1555 318 252 225 50 chr17 84259069 84259791 -1178689 + L1MDb LINE L1 1118 1963 -4443 448 199 44 55 chr17 84260030 84260211 -1178269 + L1MDb LINE L1 2303 2481 -4106 2113 110 10 0 chr17 84261596 84261888 -1176592 + AluSx SINE Alu 1 295 -17 1175 172 12 117 chr17 84262229 84262572 -1175908 + AluJo SINE Alu 6 312 0 1895 139 0 0 chr17 84262592 84262866 -1175614 + AluSx SINE Alu 13 286 -26 24 32 0 0 chr17 84263231 84263262 -1175218 + AT_rich Low_complexity Low_complexity 1 31 0 669 142 117 17 chr17 84264569 84264689 -1173791 - FLAM_C SINE Alu 0 133 2 3011 171 54 141 chr17 84264854 84265377 -1173103 + L1MB5 LINE L1 5275 5842 -332 486 179 0 0 chr17 84265377 84265455 -1173025 + FLAM SINE Alu 43 120 -23 3011 171 54 141 chr17 84265455 84265778 -1172702 + L1MB5 LINE L1 5842 6109 -65 2156 92 3 16 chr17 84265778 84265944 -1172536 - AluSx SINE Alu -13 299 137 2018 60 53 18 chr17 84265944 84266227 -1172253 - AluY SINE Alu -18 293 1 2156 92 3 16 chr17 84266227 84266363 -1172117 - AluSx SINE Alu -175 137 1 3011 171 54 141 chr17 84266363 84266424 -1172056 + L1MB5 LINE L1 6109 6174 0 257 266 59 37 chr17 84267360 84267458 -1171022 - MIR SINE MIR -103 105 7 2057 124 95 18 chr17 84268881 84269219 -1169261 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr17 84273473 84273495 -1164985 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr17 84273635 84273655 -1164825 + (A)n Simple_repeat Simple_repeat 1 20 0 1213 148 82 20 chr17 84274785 84275088 -1163392 - Charlie1 DNA MER1_type 0 2761 2440 2345 243 28 35 chr17 84275613 84276152 -1162328 - Charlie1 DNA MER1_type -231 2530 1996 1865 125 50 0 chr17 84276152 84276449 -1162031 + AluSx SINE Alu 1 312 0 2345 243 28 35 chr17 84276449 84276614 -1161866 - Charlie1 DNA MER1_type -765 1996 1831 1965 157 44 37 chr17 84276614 84276997 -1161483 + Tigger1 DNA MER2_type 1973 2358 -60 23 0 0 0 chr17 84277053 84277076 -1161404 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr17 84277096 84277117 -1161363 + AT_rich Low_complexity Low_complexity 1 21 0 266 270 40 27 chr17 84277169 84277243 -1161237 - MER5A DNA MER1_type -26 163 89 21 36 0 0 chr17 84278202 84278230 -1160250 + AT_rich Low_complexity Low_complexity 1 28 0 293 258 134 21 chr17 84278547 84278644 -1159836 - MIR3 SINE MIR -14 194 87 221 279 0 0 chr17 84279346 84279389 -1159091 + MIR SINE MIR 63 105 -157 1176 180 51 9 chr17 84279954 84280171 -1158309 + AluJo SINE Alu 87 312 0 1143 237 95 15 chr17 84281888 84282226 -1156254 + MLT1A1 LTR MaLR 1 365 0 364 262 121 46 chr17 84282369 84282523 -1155957 - MIR SINE MIR -62 146 32 251 280 0 0 chr17 84283458 84283533 -1154947 + L1MC4 LINE L1 6467 6541 -1501 531 185 0 63 chr17 84283645 84284013 -1154467 + (CA)n Simple_repeat Simple_repeat 1 344 0 312 200 0 63 chr17 84284024 84284214 -1154266 + (CA)n Simple_repeat Simple_repeat 1 178 0 417 173 4 61 chr17 84284268 84284532 -1153948 + (CA)n Simple_repeat Simple_repeat 1 248 0 589 233 145 18 chr17 84284533 84284871 -1153609 + L1MC3 LINE L1 6602 6988 -820 676 314 137 15 chr17 84284871 84285463 -1153017 + L1MC4 LINE L1 7238 7901 -141 1824 163 28 3 chr17 84285517 84285805 -1152675 + AluJo SINE Alu 1 295 -17 1223 131 0 86 chr17 84286670 84286892 -1151588 - AluJo SINE Alu -24 288 86 524 277 54 30 chr17 84286912 84287139 -1151341 + L1MCa LINE L1 19 236 -6187 279 313 49 31 chr17 84287146 84287309 -1151171 + L1MCa LINE L1 269 434 -5989 453 301 54 43 chr17 84287530 84287879 -1150601 + L1MCa LINE L1 752 1104 -5319 1145 203 17 8 chr17 84287881 84288122 -1150358 + MLT2C1 LTR ERVL 1 243 -154 191 122 0 49 chr17 84288123 84288164 -1150316 + (CATA)n Simple_repeat Simple_repeat 4 42 0 269 130 22 0 chr17 84288166 84288212 -1150268 + MLT2C1 LTR ERVL 351 397 0 711 275 44 23 chr17 84288316 84288650 -1149830 + L1MCa LINE L1 1265 1620 -4926 792 272 73 46 chr17 84289740 84289906 -1148574 + L1MCa LINE L1 1933 2093 -5029 636 193 0 44 chr17 84289906 84290041 -1148439 + FLAM_A SINE Alu 3 131 -2 792 272 73 46 chr17 84290041 84290506 -1147974 + L1MCa LINE L1 2093 2581 -4541 * 1943 209 79 41 chr17 84290496 84290547 -1147933 + L1ME1 LINE L1 5563 5611 -555 2527 70 3 3 chr17 84290547 84290848 -1147632 + AluSp SINE Alu 1 301 -12 1943 209 79 41 chr17 84290848 84291365 -1147115 + L1ME1 LINE L1 5611 6107 -59 1477 108 5 0 chr17 84291365 84291560 -1146920 + AluSq SINE Alu 1 196 -117 1727 160 33 39 chr17 84291560 84291872 -1146608 + L1MB3 LINE L1 5824 6135 -48 243 0 0 0 chr17 84291872 84291899 -1146581 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1727 160 33 39 chr17 84291899 84291948 -1146532 + L1MB3 LINE L1 6135 6183 0 647 277 151 5 chr17 84291957 84292163 -1146317 + MIR SINE MIR 27 262 0 2117 115 0 0 chr17 84292345 84292632 -1145848 + AluSc SINE Alu 21 307 -2 442 250 8 8 chr17 84293235 84293359 -1145121 - L1ME LINE L1 -463 5658 5535 359 307 62 58 chr17 84293486 84293727 -1144753 + L2 LINE L2 2849 3090 -223 894 323 83 53 chr17 84293901 84294502 -1143978 - L1ME LINE L1 -1115 5031 4413 948 213 0 0 chr17 84294608 84294782 -1143698 + FAM SINE Alu 1 43 -6 396 176 88 48 chr17 84294786 84294840 -1143640 + L1MA4 LINE L1 6122 6172 -128 2394 114 0 0 chr17 84294840 84295148 -1143332 + AluSx SINE Alu 1 308 -4 396 176 88 48 chr17 84295148 84295218 -1143262 + L1MA4 LINE L1 6172 6251 -49 589 308 135 36 chr17 84295221 84295659 -1142821 - L1ME LINE L1 -1695 4451 3971 23 0 0 0 chr17 84295720 84295743 -1142737 + AT_rich Low_complexity Low_complexity 1 23 0 1872 158 6 13 chr17 84295746 84296057 -1142423 - AluJb SINE Alu -3 309 1 22 0 0 0 chr17 84297314 84297336 -1141144 + AT_rich Low_complexity Low_complexity 1 22 0 2072 133 0 3 chr17 84297892 84298193 -1140287 - AluSx SINE Alu -12 300 1 347 196 63 112 chr17 84298504 84298647 -1139833 + MIR3 SINE MIR 72 207 -1 402 258 211 0 chr17 84298923 84299113 -1139367 - MER46C DNA MER2_type -106 232 3 2124 120 0 20 chr17 84300389 84300688 -1137792 + AluSx SINE Alu 1 293 -19 297 164 0 0 chr17 84301291 84301346 -1137134 + L1MB8 LINE L1 6124 6178 0 * 312 228 79 10 chr17 84301339 84301440 -1137040 + L1ME4a LINE L1 5813 5920 -201 302 179 119 112 chr17 84301456 84301590 -1136890 + L1ME4a LINE L1 5978 6112 -9 551 139 0 13 chr17 84301961 84302040 -1136440 - FRAM/FAM SINE Alu -105 71 1 2338 95 10 0 chr17 84302078 84302373 -1136107 + AluSg SINE Alu 1 298 -12 315 338 41 7 chr17 84303182 84303327 -1135153 + LTR67 LTR ERVL 36 185 -372 1385 166 0 9 chr17 84305785 84306002 -1132478 - AluJo SINE Alu -12 300 86 1603 199 0 11 chr17 84306249 84306531 -1131949 + AluJo SINE Alu 10 288 -24 337 275 54 58 chr17 84306597 84307118 -1131362 + L1MC4 LINE L1 7261 7877 -165 1875 142 0 18 chr17 84307118 84307415 -1131065 + AluSx SINE Alu 15 306 0 337 275 54 58 chr17 84307415 84307581 -1130899 + L1MC4 LINE L1 7877 8042 0 270 136 0 0 chr17 84308471 84308515 -1129965 + (GGAGAA)n Simple_repeat Simple_repeat 4 47 0 297 0 0 0 chr17 84308862 84308895 -1129585 + (CA)n Simple_repeat Simple_repeat 2 34 0 2327 105 3 0 chr17 84308910 84309205 -1129275 - AluSx SINE Alu -16 296 1 225 289 77 29 chr17 84310075 84310179 -1128301 + MIR SINE MIR 84 192 -70 410 263 13 20 chr17 84310281 84310433 -1128047 + L1MC4a LINE L1 5826 5976 -1832 209 132 0 26 chr17 84311049 84311087 -1127393 + (TA)n Simple_repeat Simple_repeat 2 38 0 737 163 8 31 chr17 84311427 84311556 -1126924 + FLAM_C SINE Alu 2 127 -6 252 0 0 0 chr17 84311856 84311884 -1126596 + (TGGA)n Simple_repeat Simple_repeat 4 31 0 224 320 26 0 chr17 84311886 84311964 -1126516 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 463 157 39 69 chr17 84312221 84312323 -1126157 + AluJo SINE Alu 71 169 -143 2381 77 3 0 chr17 84312355 84312652 -1125828 + AluY SINE Alu 1 298 -13 251 272 232 0 chr17 84312912 84313037 -1125443 - MIR SINE MIR -19 243 90 741 139 7 44 chr17 84313606 84313743 -1124737 + FLAM_C SINE Alu 2 133 0 2673 85 31 6 chr17 84313747 84314101 -1124379 + THE1B LTR MaLR 2 364 0 2305 210 41 9 chr17 84314603 84315141 -1123339 + MER68 LTR ERV1 1 555 -7 547 294 130 12 chr17 84316459 84316882 -1121598 - MLT1G LTR MaLR -89 505 18 356 277 0 0 chr17 84316882 84316965 -1121515 - MLT1G1 LTR MaLR -511 84 2 488 269 42 36 chr17 84317840 84318033 -1120447 - MLT1G-int LTR MaLR -879 492 299 704 174 144 25 chr17 84318329 84318530 -1119950 - MLT1G LTR MaLR 0 590 366 444 184 51 0 chr17 84318606 84318704 -1119776 - MLT1G1 LTR MaLR -441 154 52 667 167 61 0 chr17 84318734 84318848 -1119632 + AluJo SINE Alu 166 286 -26 534 16 0 0 chr17 84318848 84318911 -1119569 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 1806 168 0 7 chr17 84319639 84319924 -1118556 - AluJb SINE Alu -21 291 9 1555 189 64 10 chr17 84319977 84320273 -1118207 + AluJo SINE Alu 1 312 0 1759 171 0 4 chr17 84322036 84322316 -1116164 + AluJo SINE Alu 3 281 -31 389 218 0 0 chr17 84722671 84722749 -715731 - L1M4 LINE L1 -527 5657 5580 2323 87 0 6 chr17 84723228 84723540 -714940 + AluSg SINE Alu 1 310 0 226 275 0 69 chr17 84723642 84723831 -714649 + C-rich Low_complexity Low_complexity 4 179 0 304 263 0 58 chr17 84723895 84724066 -714414 + C-rich Low_complexity Low_complexity 3 163 0 613 260 81 37 chr17 84724169 84724492 -713988 + L1ME3A LINE L1 5569 5905 -265 2365 91 0 0 chr17 84724493 84724801 -713679 + AluSx SINE Alu 1 308 -4 985 248 71 36 chr17 84724929 84724940 -713540 + HAL1b LINE L1 238 247 -1101 1902 138 7 14 chr17 84724940 84725236 -713244 + AluSx SINE Alu 1 294 -18 210 71 0 0 chr17 84725237 84725265 -713215 + (CA)n Simple_repeat Simple_repeat 2 29 0 985 248 71 36 chr17 84725265 84725699 -712781 + HAL1b LINE L1 246 701 -647 1431 129 0 19 chr17 84725799 84726009 -712471 - AluSg SINE Alu -104 206 1 631 290 132 15 chr17 84726397 84726738 -711742 + HAL1 LINE L1 1333 1713 -794 417 132 79 0 chr17 84726853 84726929 -711551 + AluS SINE Alu 6 87 -225 2026 113 3 3 chr17 84727454 84727736 -710744 + AluSx SINE Alu 1 282 -30 548 276 76 63 chr17 84728483 84728599 -709881 - L1ME LINE L1 -465 5699 5586 1959 142 3 3 chr17 84728599 84728895 -709585 + AluSx SINE Alu 1 296 -16 548 276 76 63 chr17 84728895 84729093 -709387 - L1ME LINE L1 -578 5586 5381 * 1338 266 82 0 chr17 84729072 84729550 -708930 - L1ME LINE L1 -3371 2775 2259 824 213 0 60 chr17 84729550 84729590 -708890 - AluJo/FRAM SINE Alu -4 308 267 2293 92 0 3 chr17 84729590 84729895 -708585 + AluSx SINE Alu 1 304 -8 824 213 0 60 chr17 84729895 84730037 -708443 - AluJo/FRAM SINE Alu -45 267 137 2108 104 0 0 chr17 84730496 84730775 -707705 + AluSx SINE Alu 1 279 -33 263 264 164 36 chr17 84730784 84730924 -707556 - MER5A DNA MER1_type -1 188 31 2205 89 13 16 chr17 84732578 84732891 -705589 - AluSx SINE Alu 0 312 1 2643 159 89 80 chr17 84732891 84733007 -705473 - LTR8A LTR ERV1 -9 718 604 1848 90 62 31 chr17 84733007 84733295 -705185 - AluY SINE Alu -14 297 1 2643 159 89 80 chr17 84733295 84733888 -704592 - LTR8A LTR ERV1 -123 604 3 1353 142 84 9 chr17 84734044 84734340 -704140 - MER4B LTR ERV1 0 707 319 619 149 11 0 chr17 84734450 84734544 -703936 + AluJo SINE Alu 58 152 -160 1764 176 3 0 chr17 84734635 84734924 -703556 - AluJo SINE Alu -22 290 1 1271 223 61 33 chr17 84735980 84736302 -702178 - MLT1C LTR MaLR -56 411 99 2257 94 0 23 chr17 84736302 84736611 -701869 + AluSx SINE Alu 1 302 -10 2403 93 0 0 chr17 84736611 84736921 -701559 + AluSg SINE Alu 1 310 0 1271 223 61 33 chr17 84736921 84736992 -701488 - MLT1C LTR MaLR -367 100 6 503 221 0 41 chr17 84737525 84737647 -700833 + AluSg/x SINE Alu 183 299 -11 22 88 0 0 chr17 84737865 84737922 -700558 + AT_rich Low_complexity Low_complexity 1 57 0 2152 123 7 0 chr17 84737966 84738276 -700204 + AluSx SINE Alu 1 312 0 1878 129 4 4 chr17 84739770 84740042 -698438 + AluSx SINE Alu 1 272 -40 2098 231 60 49 chr17 84740143 84740427 -698053 + L1ME1 LINE L1 4699 4978 -1188 2114 110 0 0 chr17 84740427 84740741 -697739 + AluSg SINE Alu 1 314 0 2098 231 60 49 chr17 84740741 84741070 -697410 + L1ME1 LINE L1 4978 5302 -864 1539 164 9 61 chr17 84741070 84741399 -697081 + AluJo SINE Alu 1 312 0 2098 231 60 49 chr17 84741399 84741499 -696981 + L1ME1 LINE L1 5302 5399 -767 2423 76 0 0 chr17 84741499 84741801 -696679 + AluSx SINE Alu 1 302 -10 2098 231 60 49 chr17 84741801 84742245 -696235 + L1ME1 LINE L1 5399 5898 -268 414 205 86 0 chr17 84742271 84742388 -696092 + L1ME1 LINE L1 5977 6103 -63 2091 107 3 3 chr17 84742394 84742683 -695797 + AluSq SINE Alu 1 289 -24 2091 101 3 10 chr17 84742789 84743096 -695384 + AluSg SINE Alu 1 305 -5 2327 84 0 10 chr17 84743108 84743406 -695074 + AluSx SINE Alu 1 295 -17 2209 105 3 3 chr17 84744144 84744450 -694030 + AluSg1 SINE Alu 1 306 -3 181 319 0 0 chr17 84745320 84745367 -693113 + MIR SINE MIR 77 123 -85 2179 87 17 3 chr17 84745623 84745921 -692559 + AluSx SINE Alu 1 302 -10 397 336 51 20 chr17 84746947 84747200 -691280 + L1M4 LINE L1 5081 5341 -805 781 158 0 0 chr17 84747210 84747337 -691143 - AluSg/x SINE Alu 0 312 186 1231 78 0 18 chr17 84747437 84747603 -690877 - AluSq SINE Alu -150 163 1 2734 241 49 30 chr17 84747607 84748009 -690471 + L1ME1 LINE L1 5176 5569 -597 2443 60 0 3 chr17 84748009 84748311 -690169 - AluY SINE Alu -10 301 1 2734 241 49 30 chr17 84748311 84748625 -689855 + L1ME1 LINE L1 5569 5919 -247 8256 50 1 0 chr17 84748625 84749593 -688887 + LTR5 LTR ERVK 1 969 0 2734 241 49 30 chr17 84749593 84749846 -688634 + L1ME1 LINE L1 5919 6166 0 453 285 104 30 chr17 84750275 84750491 -687989 + MIR SINE MIR 1 225 -37 1226 79 0 12 chr17 84751393 84751557 -686923 + AluSg/x SINE Alu 147 308 -4 5406 171 49 69 chr17 84752605 84754077 -684403 + MER52A LTR ERV1 9 1755 0 2260 104 0 0 chr17 84754163 84754461 -684019 + AluSx SINE Alu 1 298 -14 1905 102 30 0 chr17 84756416 84756680 -681800 + AluSx SINE Alu 24 295 -17 688 255 102 71 chr17 84756696 84756990 -681490 + MLT1G LTR MaLR 86 394 -167 684 110 195 0 chr17 84757125 84757243 -681237 + AluSg SINE Alu 1 141 -169 2159 58 19 16 chr17 84757244 84757553 -680927 + AluY SINE Alu 1 310 -1 213 351 0 0 chr17 84757590 84757664 -680816 + (CGTG)n Simple_repeat Simple_repeat 2 75 0 180 0 0 0 chr17 84758084 84758104 -680376 + (CCCCG)n Simple_repeat Simple_repeat 2 21 0 2218 85 3 3 chr17 84758777 84759072 -679408 + AluSq SINE Alu 1 295 -18 1533 141 3 60 chr17 84759780 84759869 -678611 + AluSx SINE Alu 24 116 -196 2081 68 54 0 chr17 84759869 84760147 -678333 - AluY SINE Alu -17 294 2 1533 141 3 60 chr17 84760147 84760340 -678140 + AluSx SINE Alu 116 290 -22 212 208 0 26 chr17 84761204 84761281 -677199 + (CAGAGA)n Simple_repeat Simple_repeat 4 78 0 282 56 0 0 chr17 84761436 84761472 -677008 + (TA)n Simple_repeat Simple_repeat 2 37 0 2033 133 0 17 chr17 84761472 84761772 -676708 - AluSx SINE Alu -17 295 1 1794 133 51 14 chr17 84761809 84761980 -676500 - AluSx SINE Alu -8 304 116 2442 66 0 0 chr17 84761980 84762281 -676199 - AluY SINE Alu -10 301 1 1794 133 51 14 chr17 84762281 84762402 -676078 - AluSx SINE Alu -196 116 1 1925 149 7 3 chr17 84762418 84762720 -675760 - AluSg SINE Alu -2 308 6 1223 187 172 23 chr17 84762872 84763134 -675346 + AluJb SINE Alu 2 302 0 234 322 110 0 chr17 84763972 84764172 -674308 - L2 LINE L2 -227 3086 2858 529 188 45 9 chr17 84764242 84764354 -674126 - L1MB7 LINE L1 -19 6165 6050 2281 101 10 0 chr17 84764354 84764662 -673818 - AluSp SINE Alu 0 313 3 1068 77 0 0 chr17 84764670 84764800 -673680 - AluSp SINE Alu -183 130 1 1138 97 12 12 chr17 84764917 84765082 -673398 + AluSq SINE Alu 129 293 -20 2059 146 0 0 chr17 84765082 84765390 -673090 - AluSg SINE Alu -2 308 1 808 236 105 23 chr17 84765396 84765665 -672815 - L1MEc LINE L1 -3034 3181 2877 2226 113 0 0 chr17 84765665 84765966 -672514 - AluSc SINE Alu -8 301 1 808 236 105 23 chr17 84765966 84766040 -672440 - L1MEc LINE L1 -3338 2877 2810 535 233 76 23 chr17 84766055 84766227 -672253 - MLT1B LTR MaLR -209 181 1 840 238 114 29 chr17 84766234 84766406 -672074 - L1MEc LINE L1 -3620 2595 2439 2059 123 7 3 chr17 84766406 84766715 -671765 - AluSq SINE Alu -3 310 1 840 238 114 29 chr17 84766715 84767068 -671412 - L1MEc LINE L1 -3776 2439 2053 2111 116 3 3 chr17 84767649 84767951 -670529 + AluSx SINE Alu 1 302 -10 2238 105 0 6 chr17 84768041 84768354 -670126 + AluSx SINE Alu 1 311 -1 235 239 14 14 chr17 84768391 84768462 -670018 - LTR37B LTR ERV1 -181 287 217 507 206 0 101 chr17 84769040 84769239 -669241 + C-rich Low_complexity Low_complexity 2 180 0 279 177 13 70 chr17 84769256 84769414 -669066 + C-rich Low_complexity Low_complexity 2 150 0 2184 78 7 3 chr17 84769849 84770140 -668340 + AluSq SINE Alu 1 292 -21 2461 54 3 22 chr17 84770140 84770456 -668024 + AluY SINE Alu 1 310 -1 404 269 54 30 chr17 84770657 84770824 -667656 + MLT1K LTR MaLR 401 571 -17 1373 200 70 3 chr17 84771301 84771631 -666849 - MLT1A1 LTR MaLR -3 362 11 2158 118 7 0 chr17 84772410 84772714 -665766 - AluSx SINE Alu -6 306 1 2376 56 0 0 chr17 84772726 84773039 -665441 - AluSg SINE Alu 0 313 1 219 152 0 0 chr17 84773880 84773926 -664554 + T-rich Low_complexity Low_complexity 2 47 0 2420 50 3 3 chr17 84774672 84774969 -663511 - AluY SINE Alu -8 303 7 2273 57 14 3 chr17 84775050 84775370 -663110 - AluY SINE Alu 0 323 1 331 339 27 59 chr17 84776386 84776572 -661908 - L1ME4a LINE L1 -77 6044 5865 2207 103 30 0 chr17 84776579 84776880 -661600 + AluSg SINE Alu 1 310 0 2153 213 50 78 chr17 84777525 84778379 -660101 + L1M4 LINE L1 3806 4635 -1511 565 221 75 65 chr17 84778653 84778852 -659628 - MLT2B3 LTR ERVL -8 546 346 275 210 16 0 chr17 84778854 84778916 -659564 - Ricksha DNA DNA -1624 422 360 277 340 12 6 chr17 84779251 84779413 -659067 + C-rich Low_complexity Low_complexity 4 166 0 2244 70 0 20 chr17 84780185 84780483 -657997 + AluSg SINE Alu 1 292 -18 379 129 40 10 chr17 84780599 84780700 -657780 + (TG)n Simple_repeat Simple_repeat 2 105 0 548 95 61 7 chr17 84780807 84780954 -657526 + (TG)n Simple_repeat Simple_repeat 2 156 0 2111 120 0 3 chr17 84782229 84782530 -655950 + AluSx SINE Alu 2 301 -11 2187 88 3 7 chr17 84782639 84782936 -655544 + AluSx SINE Alu 1 296 -16 2118 106 0 0 chr17 84783834 84784144 -654336 - AluSq SINE Alu 0 310 1 2343 93 0 0 chr17 84784247 84784558 -653922 - AluY SINE Alu 0 311 1 2262 91 3 3 chr17 84784560 84784890 -653590 - AluSp SINE Alu 0 313 1 2050 90 0 0 chr17 84784891 84785158 -653322 - AluSq SINE Alu -13 300 34 513 275 0 0 chr17 84786258 84786425 -652055 + (TG)n Simple_repeat Simple_repeat 1 167 0 29 0 0 0 chr17 84786746 84786775 -651705 + AT_rich Low_complexity Low_complexity 1 29 0 1916 155 0 3 chr17 84786780 84787076 -651404 + AluJb SINE Alu 11 305 -7 2311 103 6 0 chr17 84787083 84787394 -651086 + AluSp SINE Alu 1 313 0 305 400 24 18 chr17 84787405 84787570 -650910 + L1MC/D LINE L1 5430 5595 -2213 2210 95 0 14 chr17 84787576 84787871 -650609 - AluY SINE Alu -20 291 1 1811 155 0 13 chr17 84787888 84788192 -650288 - AluJo SINE Alu -12 300 1 742 159 16 0 chr17 84788202 84788328 -650152 - AluSg/x SINE Alu -2 310 183 2303 89 0 19 chr17 84788575 84788888 -649592 + AluSq SINE Alu 1 307 -6 1780 156 11 0 chr17 84790796 84791071 -647409 - AluJo SINE Alu -12 300 23 2092 112 3 0 chr17 84791172 84791459 -647021 - AluSg SINE Alu -22 288 1 776 235 15 15 chr17 84791499 84791699 -646781 + AluJb SINE Alu 102 301 -11 2175 81 32 0 chr17 84791852 84792136 -646344 - AluSp SINE Alu -20 293 1 373 239 22 39 chr17 84794213 84794393 -644087 + C-rich Low_complexity Low_complexity 4 180 0 25 51 0 0 chr17 84794589 84794628 -643852 + GC_rich Low_complexity Low_complexity 1 39 0 195 271 0 0 chr17 84795260 84795330 -643150 + (TG)n Simple_repeat Simple_repeat 1 70 0 300 345 0 0 chr17 84795350 84795463 -643017 + (TG)n Simple_repeat Simple_repeat 2 114 0 416 349 0 6 chr17 84795486 84795661 -642819 + (TG)n Simple_repeat Simple_repeat 1 174 0 1697 127 83 0 chr17 84796097 84796350 -642130 - AluSx SINE Alu -16 296 23 226 255 78 39 chr17 84797102 84797204 -641276 - L3 LINE CR1 -166 1411 1306 2112 137 0 0 chr17 84797289 84797588 -640892 + AluSx SINE Alu 1 299 -13 2222 62 21 3 chr17 84797588 84797876 -640604 + AluY SINE Alu 1 293 -18 456 199 75 27 chr17 84797953 84798099 -640381 + MLT1C LTR MaLR 6 158 -309 259 259 0 0 chr17 84798098 84798156 -640324 - Charlie1 DNA MER1_type -2703 58 1 * 462 229 64 0 chr17 84799226 84799335 -639145 - MER5A DNA MER1_type -70 119 4 343 306 25 0 chr17 84799635 84799795 -638685 + (CCCCAA)n Simple_repeat Simple_repeat 1 164 0 * 416 280 28 13 chr17 84799746 84800037 -638443 + C-rich Low_complexity Low_complexity 1 295 0 311 256 23 0 chr17 84801238 84801324 -637156 - MLT1A2 LTR MaLR -283 91 4 355 306 74 8 chr17 84801549 84801752 -636728 - MER20 DNA MER1_type -1 218 1 188 349 48 0 chr17 84802034 84802117 -636363 - MIR SINE MIR -66 196 110 2202 114 0 0 chr17 84802197 84802503 -635977 - AluSx SINE Alu -6 306 1 1452 227 42 0 chr17 84802511 84802872 -635608 - L1MB3 LINE L1 -1 6182 5807 647 317 79 56 chr17 84803009 84803172 -635308 - L1MEc LINE L1 -1214 5001 4843 2071 108 44 0 chr17 84803172 84803469 -635011 - AluSx SINE Alu -2 310 1 647 317 79 56 chr17 84803469 84803875 -634605 - L1MEc LINE L1 -1372 4843 1956 849 244 102 12 chr17 84803921 84804245 -634235 - L1MB7 LINE L1 -9 6175 5823 937 125 0 0 chr17 84804249 84804385 -634095 - AluSg/x SINE Alu -6 306 171 710 85 11 0 chr17 84804924 84805018 -633462 + AluS SINE Alu 2 96 -217 849 200 0 24 chr17 84805217 84805387 -633093 - FRAM SINE Alu 0 166 1 2984 114 12 5 chr17 84805413 84805841 -632639 - L1PA8 LINE L1 -3 6169 5739 2262 84 0 10 chr17 84806056 84806355 -632125 + AluSq SINE Alu 1 296 -17 1952 105 0 0 chr17 84806489 84806747 -631733 + AluSx SINE Alu 22 279 -33 263 264 164 36 chr17 84806756 84806896 -631584 - MER5A DNA MER1_type -1 188 31 1331 157 120 15 chr17 84809225 84809492 -628988 - AluJo SINE Alu -17 295 1 269 239 0 45 chr17 84809848 84809936 -628544 + CT-rich Low_complexity Low_complexity 4 87 0 2357 240 39 0 chr17 84810062 84810600 -627880 - MER68 LTR ERV1 0 562 4 1333 99 16 0 chr17 84810886 84811078 -627402 + AluY SINE Alu 104 298 -13 591 104 0 0 chr17 84811078 84811155 -627325 - AluS SINE Alu -235 77 1 573 240 41 0 chr17 84812146 84812292 -626188 - MLT1E LTR MaLR 0 593 442 492 254 169 10 chr17 84812320 84812521 -625959 - MLT1E LTR MaLR -280 313 81 223 162 0 0 chr17 84812605 84812642 -625838 - L2 LINE L2 -16 3256 3220 2217 113 0 0 chr17 84812702 84813003 -625477 + AluSx SINE Alu 1 301 -11 378 269 114 23 chr17 84813045 84813220 -625260 - MIR SINE MIR -57 205 15 2360 80 3 0 chr17 84813425 84813724 -624756 + AluSp SINE Alu 1 300 -13 1920 95 9 104 chr17 84813841 84814177 -624303 + AluSp SINE Alu 1 304 -9 1367 128 0 0 chr17 84814333 84814520 -623960 - AluSx SINE Alu -125 187 1 515 150 0 0 chr17 84814520 84814600 -623880 + AluJ/FRAM SINE Alu 221 300 -12 1128 54 0 0 chr17 84814609 84814756 -623724 + AluY SINE Alu 165 311 0 2367 76 0 16 chr17 84816516 84816831 -621649 - AluY SINE Alu -1 310 1 4940 62 11 9 chr17 84816847 84817490 -620990 - SVA Other Other 0 1386 743 346 292 78 39 chr17 84817501 84817655 -620825 - L1ME LINE L1 -354 5767 5608 1718 25 0 0 chr17 84818507 84818704 -619776 + L1PA3 LINE L1 5956 6152 -3 2231 95 0 7 chr17 84818738 84819033 -619447 + AluSx SINE Alu 2 294 -18 1013 141 7 0 chr17 84819070 84819219 -619261 + AluJb SINE Alu 141 290 -22 8188 51 21 3 chr17 84820097 84821086 -617394 - LTR13 LTR ERVK 0 1007 1 1216 173 0 30 chr17 84821255 84821486 -616994 - AluJo SINE Alu -4 308 85 1912 98 0 4 chr17 84821512 84821767 -616713 - AluSx SINE Alu -58 254 1 1766 127 30 37 chr17 84821779 84822109 -616371 - AluSg SINE Alu 0 310 1 712 162 0 0 chr17 84822115 84822226 -616254 - AluSq/x SINE Alu -202 111 1 839 109 0 0 chr17 84823279 84823389 -615091 + AluSc SINE Alu 130 239 -70 1562 84 13 18 chr17 84823389 84823615 -614865 - AluSg SINE Alu -85 225 1 759 155 0 31 chr17 84825185 84825314 -613166 - FLAM_C SINE Alu -16 127 3 1126 275 94 34 chr17 84826036 84826513 -611967 - L1MB7 LINE L1 -19 6165 5660 2207 109 3 0 chr17 84826513 84826817 -611663 + AluSx SINE Alu 1 305 -7 2227 98 0 13 chr17 84830625 84830932 -607548 + AluSx SINE Alu 1 303 -9 2415 50 3 3 chr17 84833760 84834061 -604419 - AluY SINE Alu -10 301 1 995 178 65 87 chr17 84834416 84834691 -603789 - Tigger3(Golem) DNA MER2_type -1 3028 2760 2326 71 0 3 chr17 84834698 84834995 -603485 + AluSc SINE Alu 1 296 -13 308 227 0 30 chr17 84835003 84835069 -603411 - L1MC4 LINE L1 -1339 6703 6640 1510 179 0 0 chr17 84835487 84835733 -602747 - AluJb SINE Alu -66 246 1 223 291 18 0 chr17 84839201 84839256 -599224 - MIR SINE MIR -97 165 110 2155 94 0 14 chr17 84840636 84840814 -597666 - AluSg SINE Alu -1 309 135 2316 89 0 0 chr17 84840814 84841116 -597364 - AluY SINE Alu -9 302 1 2155 94 0 14 chr17 84841116 84841234 -597246 - AluSg SINE Alu -175 135 17 1587 147 57 4 chr17 84841426 84841705 -596775 - AluJo SINE Alu -18 294 1 2316 95 0 0 chr17 84841833 84842138 -596342 + AluSc SINE Alu 1 305 -4 259 253 11 59 chr17 84844099 84844285 -594195 + (GCGTG)n Simple_repeat Simple_repeat 2 178 0 225 258 5 59 chr17 84844460 84844646 -593834 + (ACGTG)n Simple_repeat Simple_repeat 4 179 0 681 247 98 86 chr17 84845138 84845547 -592933 - MLT2D LTR ERVL 0 414 1 353 318 40 45 chr17 84845606 84845782 -592698 - L1MEc LINE L1 -4119 2277 2103 429 231 90 0 chr17 84846937 84847071 -591409 - MLT1F LTR MaLR -2 540 395 514 255 106 16 chr17 84847092 84847347 -591133 - MLT1F1 LTR MaLR -73 494 217 184 316 51 25 chr17 84847514 84847593 -590887 - MIR SINE MIR -59 149 69 398 281 96 0 chr17 84847845 84847991 -590489 - MIR SINE MIR -79 183 24 255 250 36 0 chr17 84852787 84852871 -585609 + Charlie5 DNA MER1_type 19 105 -2507 1359 145 70 12 chr17 84852883 84853124 -585356 + AluJo SINE Alu 37 291 -21 2001 102 10 0 chr17 84855219 84855513 -582967 - AluSc SINE Alu -12 297 1 1498 171 57 14 chr17 84855514 84855795 -582685 - AluJo SINE Alu -19 293 1 183 80 0 0 chr17 84855944 84855969 -582511 + (TC)n Simple_repeat Simple_repeat 1 25 0 1199 109 0 0 chr17 84857188 84857353 -581127 - AluSg/x SINE Alu -11 299 135 434 230 137 31 chr17 84857858 84858019 -580461 - MER106A DNA MER1_type -58 178 1 2874 225 74 29 chr17 84858574 84859208 -579272 - L1MB7 LINE L1 -15 6169 5482 1502 195 7 14 chr17 84859208 84859505 -578975 - AluSq SINE Alu -12 301 7 2874 225 74 29 chr17 84859505 84859801 -578679 - L1MB7 LINE L1 -702 5482 5201 1332 173 0 66 chr17 84859801 84859971 -578509 - AluJo SINE Alu -11 301 158 1867 155 0 20 chr17 84859971 84860275 -578205 - AluJb SINE Alu -14 298 1 1332 173 0 66 chr17 84860275 84860405 -578075 - AluJo SINE Alu -154 158 21 445 238 49 37 chr17 84860414 84860578 -577902 - L1MB7 LINE L1 -942 5204 5039 684 214 8 0 chr17 84861164 84861290 -577190 + FLAM_A SINE Alu 1 127 -6 2111 100 31 0 chr17 84861463 84861753 -576727 + AluSx SINE Alu 1 299 -13 818 204 96 24 chr17 84862163 84862330 -576150 + AluJo SINE Alu 73 251 -61 2126 109 3 0 chr17 84862653 84862956 -575524 - AluSx SINE Alu -8 304 1 663 204 53 58 chr17 84863146 84863352 -575128 - L1M4c LINE L1 -4991 1655 1451 407 249 38 126 chr17 84863361 84863618 -574862 - L1M4c LINE L1 -5016 1526 1315 1310 207 60 17 chr17 84863618 84863917 -574563 - AluJb SINE Alu 0 312 1 407 249 38 126 chr17 84863917 84864057 -574423 - L1M4c LINE L1 -5227 1315 1164 44 75 0 0 chr17 84864564 84864657 -573823 + AT_rich Low_complexity Low_complexity 1 93 0 226 289 38 63 chr17 84865514 84865673 -572807 - L2 LINE L2 -1075 2239 2085 441 172 0 0 chr17 84866375 84866462 -572018 - L1MB8 LINE L1 0 6178 6092 2377 178 48 54 chr17 84866478 84866869 -571611 - L1MB4 LINE L1 -6 6174 5782 2411 73 0 13 chr17 84866869 84867184 -571296 - AluY SINE Alu 0 311 1 1046 184 6 0 chr17 84867190 84867358 -571122 - FAM SINE Alu -6 169 1 2377 178 48 54 chr17 84867358 84867548 -570932 - L1MB4 LINE L1 -403 5777 5590 219 36 0 0 chr17 84871167 84871195 -567285 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 394 329 3 15 chr17 84871899 84872235 -566245 + (TG)n Simple_repeat Simple_repeat 1 331 0 202 361 0 0 chr17 84872264 84872336 -566144 + (TG)n Simple_repeat Simple_repeat 1 72 0 361 363 6 0 chr17 84872427 84872598 -565882 + (TG)n Simple_repeat Simple_repeat 1 172 0 396 352 4 2 chr17 84872745 84873235 -565245 + (TG)n Simple_repeat Simple_repeat 1 491 0 234 339 0 0 chr17 84873246 84873355 -565125 + (TG)n Simple_repeat Simple_repeat 1 109 0 331 365 0 11 chr17 84873442 84873623 -564857 + (TG)n Simple_repeat Simple_repeat 1 179 0 392 257 190 11 chr17 84873667 84873846 -564634 + Charlie2 DNA MER1_type 28 238 -2624 547 258 51 92 chr17 84874000 84874120 -564360 + Charlie2 DNA MER1_type 2025 2148 -714 1769 173 16 0 chr17 84874120 84874426 -564054 + AluJb SINE Alu 1 311 -1 547 258 51 92 chr17 84874426 84874475 -564005 + Charlie2 DNA MER1_type 2148 2197 -665 1779 169 3 0 chr17 84874475 84874776 -563704 + AluJo SINE Alu 1 302 -10 547 258 51 92 chr17 84874776 84875214 -563266 + Charlie2 DNA MER1_type 2197 2608 -254 882 159 0 29 chr17 84875217 84875387 -563093 - AluJb SINE Alu -22 290 126 287 217 231 7 chr17 84875423 84875566 -562914 + Charlie2 DNA MER1_type 2666 2840 -22 2262 91 0 7 chr17 84876524 84876831 -561649 - AluSq SINE Alu -8 305 1 196 67 89 0 chr17 84877798 84877843 -560637 + A-rich Low_complexity Low_complexity 2 50 0 202 303 26 19 chr17 84880443 84880598 -557882 + (CATA)n Simple_repeat Simple_repeat 3 158 0 2046 77 84 3 chr17 84882063 84882350 -556130 - AluY SINE Alu -1 310 1 1273 153 40 9 chr17 84882413 84882636 -555844 - AluJb SINE Alu -1 311 82 1342 270 88 16 chr17 84882742 84883231 -555249 - MLT1H1 LTR MaLR 0 555 32 1070 248 22 53 chr17 84883600 84883878 -554602 - HAL1 LINE L1 -689 1818 1552 2536 61 0 0 chr17 84883878 84884189 -554291 - AluY SINE Alu 0 311 1 1070 248 22 53 chr17 84884189 84884265 -554215 - HAL1 LINE L1 -955 1552 1475 236 286 55 0 chr17 84884276 84884367 -554113 - L1MC4 LINE L1 -1 8041 7946 290 128 0 64 chr17 84884379 84884473 -554007 + (TTCCC)n Simple_repeat Simple_repeat 3 90 0 347 142 0 82 chr17 84884556 84884739 -553741 + (TTCCC)n Simple_repeat Simple_repeat 1 168 0 440 260 205 30 chr17 84884848 84885048 -553432 - L1ME2 LINE L1 -13 6151 5917 338 270 94 6 chr17 84885117 84885276 -553204 - HAL1 LINE L1 -1374 1133 961 270 0 0 0 chr17 84885316 84885346 -553134 + (TG)n Simple_repeat Simple_repeat 2 31 0 649 185 0 17 chr17 84885346 84885465 -553015 - FLAM_A SINE Alu -15 118 2 225 311 60 32 chr17 84885548 84885831 -552649 - HAL1 LINE L1 -2160 347 57 331 276 47 0 chr17 84886341 84886511 -551969 + (TCCTG)n Simple_repeat Simple_repeat 3 180 0 316 323 30 0 chr17 84886484 84886651 -551829 + (TCCCG)n Simple_repeat Simple_repeat 3 174 0 * 356 272 41 0 chr17 84886591 84886760 -551720 + (TCCTG)n Simple_repeat Simple_repeat 3 178 0 251 323 10 21 chr17 84886803 84886899 -551581 + MIR SINE MIR 45 139 -123 281 143 57 48 chr17 84887413 84887518 -550962 + (CTG)n Simple_repeat Simple_repeat 1 106 0 380 67 62 62 chr17 84887519 84887698 -550782 + (CTGTG)n Simple_repeat Simple_repeat 2 180 0 314 84 63 59 chr17 84887749 84888041 -550439 + (CTGTG)n Simple_repeat Simple_repeat 1 293 0 645 273 84 108 chr17 84888181 84888727 -549753 + L1M4 LINE L1 2485 3017 -3129 527 318 47 0 chr17 84888738 84888908 -549572 + MER58C DNA MER1_type 12 189 -26 356 379 149 0 chr17 84889010 84889279 -549201 + L1M4 LINE L1 3144 3452 -2694 1421 257 84 44 chr17 84889344 84889722 -548758 - L1MB8 LINE L1 -1 6177 5771 1245 240 55 40 chr17 84889722 84890101 -548379 - MLT1B LTR MaLR -4 386 2 1421 257 84 44 chr17 84890101 84890248 -548232 - L1MB8 LINE L1 -407 5771 5631 191 328 33 0 chr17 84890249 84890310 -548170 + MIR SINE MIR 165 227 -35 1550 176 19 59 chr17 84890429 84890753 -547727 - AluJo SINE Alu 0 312 2 1546 178 7 14 chr17 84890767 84891060 -547420 - AluJb SINE Alu -12 300 10 253 146 18 18 chr17 84891519 84891535 -546945 - MER46A DNA MER2_type -77 159 144 2628 191 125 60 chr17 84891535 84892262 -546218 + Tigger4(Zombi) DNA MER2_type 1 774 -1957 453 242 39 8 chr17 84892261 84892389 -546091 - MLT1A1 LTR MaLR -221 144 13 * 1599 170 9 28 chr17 84892612 84892930 -545550 - AluJb SINE Alu 0 312 1 1168 231 99 41 chr17 84892981 84893345 -545135 - L1MB5 LINE L1 -9 6165 5781 789 146 8 8 chr17 84893357 84893487 -544993 - FLAM_C SINE Alu 0 143 14 375 303 20 16 chr17 84893549 84893688 -544792 + L1MEc LINE L1 2304 2398 -3817 765 183 0 8 chr17 84893695 84893826 -544654 + FLAM_C SINE Alu 10 139 -4 389 248 64 8 chr17 84893836 84893961 -544519 + MLT1A1 LTR MaLR 13 144 -221 600 239 15 0 chr17 84893961 84894095 -544385 - L1MB5 LINE L1 -416 5758 5623 1417 195 21 10 chr17 84894328 84894795 -543685 - L1MB5 LINE L1 -528 5650 5176 36 0 0 0 chr17 84895103 84895139 -543341 + AT_rich Low_complexity Low_complexity 1 36 0 984 34 0 0 chr17 84895141 84895258 -543222 - L1PA2 LINE L1 -1 6154 6038 1958 157 0 3 chr17 84895258 84895570 -542910 - AluJb SINE Alu -1 311 1 2252 49 16 29 chr17 84899038 84899346 -539134 - AluY SINE Alu -7 304 1 1212 171 14 5 chr17 84906446 84906663 -531817 + AluJb SINE Alu 87 305 -7 180 280 53 27 chr17 84908120 84908195 -530285 - MIR SINE MIR -80 182 106 207 359 43 43 chr17 84909812 84909904 -528576 - MIR SINE MIR -55 207 116 21 0 0 0 chr17 84913208 84913229 -525251 + AT_rich Low_complexity Low_complexity 1 21 0 2139 83 21 7 chr17 84914465 84914755 -523725 - AluSg SINE Alu -16 294 1 358 259 54 0 chr17 84915113 84915225 -523255 - L1MD3 LINE L1 0 7995 7878 257 241 69 0 chr17 84915278 84915365 -523115 - L1MC4a LINE L1 -229 7579 7487 547 174 18 9 chr17 84915371 84915480 -523000 - L1MB7 LINE L1 -3 6181 6072 879 264 128 98 chr17 84915561 84916339 -522141 - L1MC4a LINE L1 -314 7494 6693 473 280 44 0 chr17 84916809 84916990 -521490 - L1ME1 LINE L1 -139 6041 5846 333 206 152 0 chr17 84917097 84917189 -521291 - MLT1D LTR MaLR -153 352 247 559 173 18 18 chr17 84917307 84917417 -521063 - FLAM_C SINE Alu -21 122 13 229 295 123 16 chr17 84917466 84917588 -520892 - MLT1D LTR MaLR -362 143 9 266 177 0 16 chr17 84918997 84919059 -519421 + CT-rich Low_complexity Low_complexity 2 62 0 523 80 0 0 chr17 84923743 84923818 -514662 + (TCCCC)n Simple_repeat Simple_repeat 1 75 0 2100 85 4 0 chr17 84923818 84924089 -514391 - AluSx SINE Alu -39 273 2 2352 280 95 14 chr17 84924091 84924253 -514227 - L1MD2 LINE L1 -37 6322 6175 342 0 0 0 chr17 84924253 84924291 -514189 + (TG)n Simple_repeat Simple_repeat 1 38 0 2352 280 95 14 chr17 84924291 84925261 -513219 - L1MD2 LINE L1 -184 6175 5090 372 309 54 66 chr17 84925317 84925540 -512940 - L1MD2 LINE L1 -1319 4827 4603 338 133 0 0 chr17 84931437 84931497 -506983 - Alu SINE Alu -2 298 239 2043 101 31 0 chr17 84931825 84932111 -506369 + AluSx SINE Alu 1 295 -17 234 324 37 9 chr17 84933059 84933104 -505376 - L1MA10 LINE L1 -9 6325 6281 254 318 89 19 chr17 84933104 84933318 -505162 - L1ME1 LINE L1 -44 6122 5894 273 330 82 5 chr17 84933418 84933575 -504905 - L1ME1 LINE L1 -466 5776 5598 2056 132 10 3 chr17 84933575 84933885 -504595 - AluJb SINE Alu 0 312 1 273 330 82 5 chr17 84933885 84933933 -504547 - L1ME1 LINE L1 -644 5598 5555 376 278 36 21 chr17 84934049 84934316 -504164 - L1ME1 LINE L1 -681 5485 5187 2328 74 0 3 chr17 84934359 84934656 -503824 + AluSc SINE Alu 1 296 -13 317 347 13 47 chr17 84934680 84934830 -503650 - L1ME1 LINE L1 -5 6161 6017 366 386 99 12 chr17 84935646 84936230 -502250 - L1ME1 LINE L1 -1 6165 4959 1104 265 100 14 chr17 84936543 84937108 -501372 - L1ME3 LINE L1 -282 5880 5280 796 277 153 20 chr17 84937269 84937764 -500716 - L1ME1 LINE L1 -124 6042 5482 444 265 12 18 chr17 84939164 84939330 -499150 - L1ME1 LINE L1 -3625 2521 2357 406 246 21 42 chr17 84939396 84939538 -498942 - MER58C DNA MER1_type -68 147 9 304 321 143 24 chr17 84942995 84943282 -495198 + L1M2 LINE L1 795 1115 -5734 1126 240 93 0 chr17 84944816 84945182 -493298 - MER68 LTR ERV1 -129 433 34 890 152 0 0 chr17 84945322 84945454 -493026 + FLAM_C SINE Alu 1 132 -1 316 326 35 21 chr17 84946662 84946806 -491674 + MIR SINE MIR 113 258 -4 23 33 0 0 chr17 84947155 84947185 -491295 + AT_rich Low_complexity Low_complexity 1 30 0 376 275 105 7 chr17 84947824 84948122 -490358 - L1ME2 LINE L1 -208 5956 5596 346 293 54 69 chr17 84948149 84948471 -490009 - L1ME2 LINE L1 -743 5403 5205 2000 112 6 19 chr17 84948474 84948786 -489694 - AluSx SINE Alu -4 308 1 427 365 58 11 chr17 84952858 84953047 -485433 - HAL1 LINE L1 -29 2478 2281 298 227 45 23 chr17 84953564 84953652 -484828 - MLT1I LTR MaLR -2 407 318 574 347 107 69 chr17 84953949 84954218 -484262 - L1M4 LINE L1 -4463 2362 2066 1901 101 0 22 chr17 84954218 84954496 -483984 - AluSq SINE Alu -10 303 32 574 347 107 69 chr17 84954496 84954705 -483775 - L1M4 LINE L1 -4759 2066 1866 236 294 34 73 chr17 84954707 84954911 -483569 - L1M4 LINE L1 -4832 1710 1515 376 264 94 84 chr17 84954917 84954989 -483491 - L1M4 LINE L1 -5175 1367 1297 2102 104 3 0 chr17 84954989 84955276 -483204 - AluSc SINE Alu 0 309 22 376 264 94 84 chr17 84955276 84955475 -483005 - L1M4 LINE L1 -5245 1297 1126 331 336 84 45 chr17 84955995 84956352 -482128 - L1MD2 LINE L1 -2 6426 6056 258 306 28 3 chr17 84956486 84956610 -481870 - L1MD2 LINE L1 -381 5852 5724 1857 96 8 4 chr17 84960107 84960368 -478112 + AluSx SINE Alu 51 312 0 1861 136 4 0 chr17 84961955 84962227 -476253 - AluSx SINE Alu -39 273 1 788 173 153 0 chr17 84962584 84962734 -475746 + AluSg/x SINE Alu 118 290 -20 233 289 0 52 chr17 84966541 84966638 -471842 + C-rich Low_complexity Low_complexity 5 96 0 372 274 44 0 chr17 84969978 84970113 -468367 - L1MD2 LINE L1 -1037 5178 5038 307 324 58 5 chr17 84970210 84970417 -468063 - L1MD2 LINE L1 -1308 4907 4690 1646 125 111 18 chr17 84971115 84971394 -467086 - AluJb SINE Alu -7 305 1 931 157 35 6 chr17 84971463 84971635 -466845 - AluSg/x SINE Alu -12 300 124 391 385 56 19 chr17 84972071 84972341 -466139 - L1MD2 LINE L1 -4233 2163 1884 339 333 53 34 chr17 84972453 84972710 -465770 - L1MD2 LINE L1 -4573 1642 1421 246 301 174 27 chr17 84973535 84973794 -464686 - L2 LINE L2 -628 2686 2390 204 259 120 0 chr17 84975156 84975264 -463216 + MER5A DNA MER1_type 3 123 -66 324 127 0 0 chr17 84977106 84977161 -461319 + (CA)n Simple_repeat Simple_repeat 1 55 0 417 309 99 5 chr17 84981320 84981603 -456877 - L2 LINE L2 -110 3203 2861 304 349 30 38 chr17 84981863 84981995 -456485 + L1MEd LINE L1 802 932 -5484 327 266 239 0 chr17 84982082 84982270 -456210 + L1MEd LINE L1 1237 1469 -4947 370 320 112 70 chr17 84982285 84982539 -455941 + L1MEd LINE L1 1599 1804 -983 789 183 162 31 chr17 84982539 84982730 -455750 - MER20 DNA MER1_type -3 216 1 370 320 112 70 chr17 84982730 84982859 -455621 + L1MEd LINE L1 1804 1926 -861 355 314 115 42 chr17 84982993 84983394 -455086 + L1MEd LINE L1 2193 2817 -3609 535 343 102 13 chr17 84983441 84983485 -454995 + L1MEd LINE L1 3087 3126 -3300 306 0 0 0 chr17 84983485 84983519 -454961 + (TG)n Simple_repeat Simple_repeat 2 35 0 535 343 102 13 chr17 84983519 84983789 -454691 + L1MEd LINE L1 3126 3429 -2997 319 320 26 13 chr17 84984884 84985037 -453443 + L1MB7 LINE L1 5136 5290 -856 247 331 94 11 chr17 84986140 84986321 -452159 + L1MB7 LINE L1 5602 5797 -2011 348 277 190 27 chr17 84986595 84986779 -451701 + L1MC5 LINE L1 7508 7721 -240 404 204 167 0 chr17 84987249 84987357 -451123 - Tigger1 DNA MER2_type -2198 220 95 2041 174 44 2 chr17 84987506 84987919 -450561 - Tigger1 DNA MER2_type -873 1545 1116 724 81 130 0 chr17 84987919 84988042 -450438 + MER85 DNA T2_type 1 139 0 3812 169 84 13 chr17 84988058 84989026 -449454 - Tigger1 DNA MER2_type -1330 1088 21 20411 95 20 45 chr17 84989299 84993109 -445371 + L1PA8 LINE L1 2293 6171 -1 449 159 31 25 chr17 84995727 84996104 -442376 + (TG)n Simple_repeat Simple_repeat 1 379 0 206 354 24 24 chr17 84996144 84996308 -442172 + (TATG)n Simple_repeat Simple_repeat 4 167 0 * 247 321 44 19 chr17 84996209 84996368 -442112 + (CATG)n Simple_repeat Simple_repeat 3 165 0 * 417 254 7 35 chr17 84996268 84996410 -442070 + (TG)n Simple_repeat Simple_repeat 1 138 0 2131 106 3 0 chr17 84999462 84999754 -438726 + AluSp SINE Alu 1 293 -20 1869 136 20 3 chr17 85000321 85000616 -437864 + AluSx SINE Alu 1 300 -12 2173 147 32 23 chr17 85005327 85005763 -432717 - MER83 LTR ERV1 -8 440 1 633 231 22 44 chr17 85007357 85007586 -430894 + L1MB7 LINE L1 5959 6182 -2 332 395 42 46 chr17 85007599 85007633 -430847 + L1MEd LINE L1 938 971 -5148 1748 147 26 32 chr17 85007633 85007946 -430534 + AluJb SINE Alu 1 311 -1 332 395 42 46 chr17 85007946 85008149 -430331 + L1MEd LINE L1 971 1174 -4945 371 255 76 6 chr17 85009444 85009601 -428879 - L1MD1 LINE L1 -7 6235 6068 1201 220 104 3 chr17 85009847 85010201 -428279 - L1MD1 LINE L1 -543 5699 5310 368 269 175 35 chr17 85011622 85011908 -426572 + MLT1G1 LTR MaLR 88 413 -182 2321 72 0 7 chr17 85012198 85012491 -425989 + AluSg SINE Alu 1 291 -19 204 354 0 0 chr17 85013085 85013167 -425313 + CT-rich Low_complexity Low_complexity 3 84 0 2058 121 10 0 chr17 85013315 85013605 -424875 - AluSx SINE Alu -19 293 1 1149 38 0 0 chr17 85013607 85013739 -424741 - AluSp SINE Alu -181 132 1 290 265 41 54 chr17 85014204 85014351 -424129 - L1ME LINE L1 -335 5831 5687 579 306 76 0 chr17 85014397 85014594 -423886 - L1ME LINE L1 -461 5705 5480 1644 134 54 27 chr17 85014594 85014892 -423588 - AluJb SINE Alu -1 311 6 579 306 76 0 chr17 85014892 85014969 -423511 - L1ME LINE L1 -686 5480 5410 330 209 96 9 chr17 85014970 85015085 -423395 - MER20 DNA MER1_type -94 125 1 523 175 42 8 chr17 85015326 85015446 -423034 + MLT1C LTR MaLR 1 124 -343 1221 311 90 9 chr17 85015471 85016196 -422284 - L1ME LINE L1 -747 5421 4638 1384 176 115 11 chr17 85016203 85016481 -421999 + AluJo SINE Alu 1 307 -5 629 185 46 0 chr17 85016481 85016589 -421891 + AluJb SINE Alu 134 246 -66 242 299 97 8 chr17 85018544 85018678 -419802 + L1MEc LINE L1 36 181 -6215 535 329 78 6 chr17 85019109 85019440 -419040 - HAL1 LINE L1 -682 1825 1471 257 296 9 26 chr17 85019498 85019613 -418867 - HAL1 LINE L1 -1134 1373 1261 1347 249 58 34 chr17 85019791 85020373 -418107 + L1M4 LINE L1 2873 3468 -2678 1703 271 98 20 chr17 85020388 85021203 -417277 + L1M4 LINE L1 4330 5208 -938 2175 245 65 17 chr17 85021246 85021903 -416577 - MER21B LTR ERV1 -77 786 98 334 256 11 11 chr17 85022124 85022214 -416266 - Tigger2 DNA MER2_type -2 2716 2627 1180 172 65 8 chr17 85022470 85022732 -415748 + LTR23 LTR ERV1 161 437 0 1314 163 4 32 chr17 85022735 85022987 -415493 - Tigger2 DNA MER2_type -105 2613 2369 573 169 24 0 chr17 85023156 85023280 -415200 - Tigger2 DNA MER2_type -2591 127 1 892 166 121 5 chr17 85023410 85023633 -414847 + MLT1A1 LTR MaLR 117 365 0 284 279 0 78 chr17 85023784 85023913 -414567 + L1MC4a LINE L1 7660 7778 -30 2131 102 3 0 chr17 85023913 85024198 -414282 + AluSx SINE Alu 1 286 -26 325 197 16 0 chr17 85024206 85024267 -414213 + L1MD3 LINE L1 7931 7992 -3 221 300 25 12 chr17 85024390 85024470 -414010 + MER5A DNA MER1_type 45 125 -64 590 206 137 34 chr17 85024686 85024919 -413561 + MLT1B LTR MaLR 1 257 -133 1631 114 0 4 chr17 85025913 85026193 -412287 - L1P LINE L1 -1014 5132 4854 * 4064 123 0 1 chr17 85026190 85026859 -411621 + L1P LINE L1 4202 4869 -1277 256 180 0 0 chr17 85026860 85026910 -411570 + Ricksha DNA DNA 2812 2861 -385 * 1218 138 13 9 chr17 85026903 85027134 -411346 + Ricksha DNA DNA 2529 2760 -94 636 140 0 0 chr17 85027165 85027272 -411208 - L1MA3 LINE L1 0 6305 6199 500 150 38 0 chr17 85027277 85027400 -411080 - Ricksha DNA DNA -1021 2230 24 627 280 21 0 chr17 85029655 85029841 -408639 - MLT1B LTR MaLR -11 379 190 181 310 0 0 chr17 85031226 85031284 -407196 - L2 LINE L2 -624 2690 2633 561 260 109 41 chr17 85034702 85035041 -403439 + MSTB1 LTR MaLR 1 362 -70 315 221 0 0 chr17 85035052 85035120 -403360 - Charlie5 DNA MER1_type -207 2405 2338 862 159 22 60 chr17 85035977 85035992 -402488 - FAM SINE Alu -136 175 161 1826 146 10 0 chr17 85035992 85036280 -402200 + AluJb SINE Alu 1 291 -21 862 159 22 60 chr17 85036280 85036446 -402034 - FAM SINE Alu -150 161 1 871 93 16 8 chr17 85036463 85036592 -401888 + AluSq/x SINE Alu 1 130 -182 3574 242 48 18 chr17 85036693 85038317 -400163 - L1M4 LINE L1 -2598 3784 2102 1678 180 0 0 chr17 85038382 85038664 -399816 - AluSx SINE Alu -40 272 1 630 220 224 8 chr17 85038671 85038939 -399541 - L1M4 LINE L1 -4481 1903 1578 433 242 11 0 chr17 85038939 85039030 -399450 + Tigger5 DNA MER2_type 1 92 -2231 376 244 0 0 chr17 85039079 85039157 -399323 + Tigger5 DNA MER2_type 2246 2323 0 1374 249 44 10 chr17 85039165 85039663 -398817 - L1M4 LINE L1 -4813 1571 1057 2464 77 0 3 chr17 85039665 85039964 -398516 - AluY SINE Alu -13 298 1 569 287 48 8 chr17 85040016 85040267 -398213 - HAL1 LINE L1 -882 1625 1365 771 240 35 0 chr17 85040485 85040656 -397824 - MER5B DNA MER1_type -1 177 1 336 286 42 17 chr17 85040996 85041115 -397365 + MIR SINE MIR 107 228 -34 5433 92 22 4 chr17 85041986 85042786 -395694 + L1PA10 LINE L1 5354 6168 0 5290 148 44 63 chr17 85042790 85043889 -394591 - Ricksha DNA DNA -459 2787 1710 438 226 9 26 chr17 85043868 85043983 -394497 - Ricksha DNA DNA -1132 122 10 * 1255 181 54 45 chr17 85043992 85044323 -394157 + MLT1A2 LTR MaLR 41 374 0 613 185 20 14 chr17 85044329 85044475 -394005 + L1ME2 LINE L1 4968 5114 -1032 1577 121 25 35 chr17 85044506 85044788 -393692 + THE1B LTR MaLR 1 279 -85 13599 128 24 66 chr17 85044797 85048644 -389836 + L1MA3 LINE L1 1944 5953 -1771 2284 117 0 7 chr17 85048644 85048951 -389529 - AluSg SINE Alu -5 305 1 13599 128 24 66 chr17 85048951 85049510 -388970 + L1MA3 LINE L1 5953 6534 -1190 2226 116 3 3 chr17 85049510 85049812 -388668 + AluSg SINE Alu 1 302 -8 13599 128 24 66 chr17 85049812 85051192 -387288 + L1MA3 LINE L1 6534 7465 -259 366 250 26 0 chr17 85051196 85051272 -387208 - L1MC4 LINE L1 -1351 6691 6614 1492 135 0 19 chr17 85051282 85051541 -386939 + L1MA2 LINE L1 6051 6304 0 2022 189 18 44 chr17 85051545 85051613 -386867 + L1ME2 LINE L1 5090 5158 -1008 2391 99 0 0 chr17 85051613 85051916 -386564 - AluY SINE Alu -8 303 1 2022 189 18 44 chr17 85051916 85052473 -386007 + L1ME2 LINE L1 5158 5698 -468 315 189 203 71 chr17 85052546 85052684 -385796 + L1ME1 LINE L1 5662 5801 -363 1744 124 0 0 chr17 85052684 85052941 -385539 - Tigger2 DNA MER2_type -10 2708 2452 3222 204 31 41 chr17 85052979 85053221 -385259 - Tigger2 DNA MER2_type -1947 771 528 2360 103 0 0 chr17 85053221 85053531 -384949 - AluSg SINE Alu 0 310 1 3222 204 31 41 chr17 85053531 85054063 -384417 - Tigger2 DNA MER2_type -2190 528 5 628 277 74 25 chr17 85054102 85054387 -384093 + L1ME1 LINE L1 5863 6161 -5 677 229 94 19 chr17 85054429 85054696 -383784 + L1MC5 LINE L1 7305 7591 -370 240 250 16 0 chr17 85054802 85054866 -383614 + L1ME2 LINE L1 5908 5972 -192 1768 170 50 0 chr17 85055043 85055325 -383155 - AluJb SINE Alu -11 301 6 840 196 0 0 chr17 85060736 85060874 -377606 - FRAM SINE Alu -38 138 1 253 261 152 14 chr17 85060896 85061034 -377446 + L1ME3A LINE L1 5268 5424 -740 335 202 93 16 chr17 85061617 85061746 -376734 + L1ME3A LINE L1 5830 5968 -202 1618 168 37 21 chr17 85061765 85062092 -376388 + MER1B DNA MER1_type 4 335 -2 248 290 69 69 chr17 85062094 85062339 -376141 + L1ME3A LINE L1 5923 6167 -3 288 248 9 40 chr17 85062562 85062785 -375695 + GA-rich Low_complexity Low_complexity 1 215 0 240 133 5 92 chr17 85062761 85062956 -375524 + (GGA)n Simple_repeat Simple_repeat 2 179 0 * 1874 154 53 35 chr17 85063219 85063493 -374987 + L1MA4 LINE L1 5858 6143 -157 2046 141 3 0 chr17 85063493 85063790 -374690 + AluSx SINE Alu 1 298 -14 1874 154 53 35 chr17 85063790 85063911 -374569 + L1MA4 LINE L1 6143 6260 -40 199 362 26 52 chr17 85064650 85064766 -373714 - MIR3 SINE MIR -41 167 55 2276 236 38 0 chr17 85064767 85065399 -373081 + ERVL LTR ERVL 4475 5130 -634 1047 190 112 4 chr17 85065588 85065857 -372623 + L1MB3 LINE L1 5884 6181 -2 2400 97 0 0 chr17 85065884 85066184 -372296 - AluSq SINE Alu -13 300 1 549 268 108 86 chr17 85066187 85066529 -371951 + L1ME LINE L1 1130 1508 -4908 1982 203 123 97 chr17 85067331 85068384 -370096 + L1ME LINE L1 4383 5463 -963 415 226 60 15 chr17 85071047 85071180 -367300 + L1MC4 LINE L1 6925 7063 -979 312 324 59 7 chr17 85072326 85072462 -366018 + L1ME LINE L1 5598 5740 -704 272 332 67 29 chr17 85072545 85072753 -365727 + L1ME LINE L1 5892 6107 -335 644 328 104 0 chr17 85073723 85074068 -364412 + L1ME2 LINE L1 4806 5186 -960 979 173 22 11 chr17 85074069 85074254 -364226 + AluJb SINE Alu 122 308 -4 422 208 9 9 chr17 85074255 85074361 -364119 + L1ME2 LINE L1 5203 5308 -838 1993 125 14 4 chr17 85074361 85074640 -363840 + AluSx SINE Alu 1 282 -30 932 257 142 46 chr17 85074691 85074772 -363708 + L1ME2 LINE L1 5317 5389 -775 2703 26 7 3 chr17 85074772 85075082 -363398 + AluY SINE Alu 1 311 0 932 257 142 46 chr17 85075082 85075691 -362789 + L1ME2 LINE L1 5389 6095 -69 310 225 28 67 chr17 85076318 85076548 -361932 + (CAGAC)n Simple_repeat Simple_repeat 1 220 0 310 225 28 67 chr17 85076692 85076922 -361558 + (CAGAC)n Simple_repeat Simple_repeat 1 220 0 2715 24 0 0 chr17 85077866 85078162 -360318 - AluY SINE Alu -15 296 1 2475 83 3 6 chr17 85078319 85078631 -359849 - AluSx SINE Alu -1 311 1 345 45 0 0 chr17 85078863 85078907 -359573 + THE1B LTR MaLR 1 44 -320 345 45 0 0 chr17 85078913 85078957 -359523 + THE1C LTR MaLR 1 44 -331 1881 151 92 15 chr17 85078967 85079305 -359175 + THE1B LTR MaLR 1 364 0 2172 90 38 0 chr17 85079571 85079860 -358620 - AluSp SINE Alu -13 300 1 21 36 0 0 chr17 85080099 85080127 -358353 + AT_rich Low_complexity Low_complexity 1 28 0 236 178 22 0 chr17 85080513 85080558 -357922 + L1ME3A LINE L1 5703 5748 -422 704 240 54 5 chr17 85080695 85080916 -357564 + L1ME3A LINE L1 5939 6170 0 2284 75 3 3 chr17 85082964 85083257 -355223 + AluY SINE Alu 1 293 -18 2044 104 44 0 chr17 85283587 85283885 -154595 + AluSx SINE Alu 1 311 -1 1009 116 14 0 chr17 85284110 85284256 -154224 - AluSq/x SINE Alu -165 148 1 2337 56 0 0 chr17 85284268 85284577 -153903 - AluSg SINE Alu 0 309 1 755 143 0 0 chr17 85285361 85285466 -153014 - AluSq/x SINE Alu -207 106 2 2291 84 0 0 chr17 85285517 85285815 -152665 - AluSg SINE Alu -12 298 1 480 232 17 79 chr17 85285963 85286140 -152340 - HAL1 LINE L1 -127 2380 2215 232 261 0 48 chr17 85286507 85286695 -151785 + (CTCA)n Simple_repeat Simple_repeat 2 180 0 843 142 15 0 chr17 85287309 85287443 -151037 + AluJo SINE Alu 1 136 -176 2071 109 20 0 chr17 85287451 85287744 -150736 + AluSx SINE Alu 2 300 -12 1029 193 8 11 chr17 85287774 85288087 -150393 + L1M4 LINE L1 5160 5470 -714 223 273 68 53 chr17 85288987 85289119 -149361 - L2 LINE L2 -322 2991 2858 526 196 45 9 chr17 85289189 85289301 -149179 - L1MB7 LINE L1 -19 6165 6050 2241 104 10 0 chr17 85289301 85289609 -148871 - AluSp SINE Alu 0 313 3 1056 77 0 0 chr17 85289617 85289747 -148733 - AluSp SINE Alu -183 130 1 930 168 114 5 chr17 85289747 85289949 -148531 - L1MB7 LINE L1 -126 6058 5835 315 161 0 0 chr17 85290138 85290194 -148286 + GA-rich Low_complexity Low_complexity 2 57 0 2408 57 7 0 chr17 85291011 85291309 -147171 + AluY SINE Alu 1 300 -11 1565 153 25 4 chr17 85291557 85291831 -146649 + AluJb SINE Alu 1 280 -32 946 209 41 5 chr17 85292035 85292231 -146249 + AluJb SINE Alu 97 299 -13 2457 56 0 0 chr17 85292296 85292600 -145880 + AluY SINE Alu 1 304 -7 922 123 8 0 chr17 85292662 85292792 -145688 - FLAM_C SINE Alu -2 131 1 180 77 0 0 chr17 85292802 85292828 -145652 + (A)n Simple_repeat Simple_repeat 1 26 0 1958 148 0 3 chr17 85292830 85293141 -145339 + AluSq SINE Alu 1 310 -3 1522 234 73 23 chr17 85293190 85293303 -145177 + L1M4c LINE L1 869 975 -5409 1316 233 0 45 chr17 85293303 85293612 -144868 + AluJb SINE Alu 1 295 -17 1522 234 73 23 chr17 85293612 85294019 -144461 + L1M4c LINE L1 975 1415 -4969 1011 238 73 26 chr17 85294012 85294352 -144128 + L1 LINE L1 4015 4370 -1776 * 1176 131 60 161 chr17 85294352 85294439 -144041 + AluJb SINE Alu 1 95 -207 2109 105 0 10 chr17 85294439 85294752 -143728 - AluSp SINE Alu -3 310 1 1176 131 60 161 chr17 85294752 85294842 -143638 + AluJb SINE Alu 95 193 -109 2135 122 0 3 chr17 85294842 85295153 -143327 + AluSx SINE Alu 1 310 -2 1176 131 60 161 chr17 85295153 85295309 -143171 + AluJb SINE Alu 193 301 -1 1699 141 39 7 chr17 85295316 85295600 -142880 + AluJo SINE Alu 1 293 -19 1075 137 5 63 chr17 85296374 85296564 -141916 - AluSx SINE Alu -129 183 5 338 233 16 2 chr17 85296568 85296691 -141789 + MER21A LTR ERV1 191 335 -528 * 2106 168 92 17 chr17 85296690 85297102 -141378 + MER21A LTR ERV1 482 924 -7 1389 217 132 63 chr17 85297312 85297818 -140662 - LTR10B LTR ERV1 -6 541 1 1191 82 82 0 chr17 85298171 85298341 -140139 - AluSg/x SINE Alu -3 307 124 1943 133 6 16 chr17 85298341 85298657 -139823 - AluSp SINE Alu 0 313 1 2301 78 10 0 chr17 85298736 85299032 -139448 + AluSq SINE Alu 1 299 -14 356 157 0 14 chr17 85299283 85299353 -139127 - L1MB2 LINE L1 -7 6164 6096 795 199 22 55 chr17 85299453 85299634 -138846 + AluSc SINE Alu 132 306 -3 1867 158 10 0 chr17 85299640 85299937 -138543 + AluJo SINE Alu 1 300 -12 2275 89 0 19 chr17 85301845 85302158 -136322 - AluSq SINE Alu -6 307 1 420 300 23 0 chr17 85302258 85302388 -136092 - L1MB2 LINE L1 -2089 5719 5587 1187 112 12 0 chr17 85302416 85302585 -135895 + AluSg/x SINE Alu 117 287 -25 791 80 0 0 chr17 85302692 85302792 -135688 - AluSq/x SINE Alu -173 139 40 2061 128 3 3 chr17 85302796 85303100 -135380 - AluSx SINE Alu -8 304 1 2101 115 6 13 chr17 85304496 85304810 -133670 - AluSx SINE Alu 0 312 1 2065 85 44 0 chr17 85306005 85306300 -132180 - AluSx SINE Alu -4 308 1 1543 221 176 51 chr17 85306502 85306723 -131757 - L1ME3A LINE L1 -7 6163 5971 2184 76 13 19 chr17 85306723 85307038 -131442 - AluSp SINE Alu 0 313 1 1543 221 176 51 chr17 85307038 85307108 -131372 - L1ME3A LINE L1 -199 5971 5911 2037 114 10 0 chr17 85307108 85307406 -131074 - AluSg SINE Alu -9 301 1 1543 221 176 51 chr17 85307406 85307899 -130581 - L1ME3A LINE L1 -259 5911 5280 2174 112 0 6 chr17 85307920 85308234 -130246 - AluSx SINE Alu 0 312 1 946 74 0 0 chr17 85308234 85308355 -130125 - AluSq/x SINE Alu -177 135 15 746 136 0 45 chr17 85309975 85310107 -128373 + FRAM SINE Alu 40 165 -11 304 262 110 36 chr17 85310115 85310445 -128035 + MLT1D LTR MaLR 48 458 -9 204 40 0 0 chr17 85310594 85310619 -127861 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 213 94 0 0 chr17 85310618 85310650 -127830 + (TA)n Simple_repeat Simple_repeat 2 33 0 1283 169 0 5 chr17 85310650 85310863 -127617 - AluJb SINE Alu -100 212 1 2144 103 7 0 chr17 85310991 85311291 -127189 + AluSq SINE Alu 1 302 -11 1364 205 178 15 chr17 85311323 85311724 -126756 + MLT1D LTR MaLR 10 476 -29 269 239 30 0 chr17 85311724 85311791 -126689 + MLT1D LTR MaLR 1 69 -436 2048 112 7 13 chr17 85311796 85312101 -126379 + AluSg SINE Alu 1 303 -7 807 181 0 37 chr17 85312201 85312428 -126052 - AluJb SINE Alu -47 265 2 1916 146 7 3 chr17 85312580 85312882 -125598 + AluSg SINE Alu 6 308 -2 1765 133 51 14 chr17 85312898 85313019 -125461 + AluSx SINE Alu 1 116 -196 2454 60 0 0 chr17 85313019 85313320 -125160 + AluY SINE Alu 1 301 -10 1765 133 51 14 chr17 85313320 85313491 -124989 + AluSx SINE Alu 116 304 -8 1970 140 0 17 chr17 85313528 85313828 -124652 + AluSx SINE Alu 1 295 -17 300 53 0 0 chr17 85313828 85313866 -124614 + (TA)n Simple_repeat Simple_repeat 2 39 0 212 208 0 26 chr17 85314021 85314098 -124382 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 2439 50 0 3 chr17 85315377 85315674 -122806 - AluY SINE Alu -9 302 7 2283 57 14 0 chr17 85315755 85316074 -122406 - AluY SINE Alu 0 323 1 306 299 69 0 chr17 85317055 85317142 -121338 - L1ME4a LINE L1 -77 6044 5952 2226 93 30 0 chr17 85317248 85317549 -120931 + AluSg SINE Alu 1 310 0 618 252 20 0 chr17 85317902 85318049 -120431 + L1MB3 LINE L1 6033 6182 -1 2173 114 0 0 chr17 85318057 85318363 -120117 + AluSx SINE Alu 1 306 -6 402 295 94 35 chr17 85318808 85319011 -119469 + MER20 DNA MER1_type 1 218 -1 339 256 23 0 chr17 85319237 85319323 -119157 + MLT1A2 LTR MaLR 4 91 -283 381 284 30 18 chr17 85320524 85320693 -117787 + G-rich Low_complexity Low_complexity 6 176 0 443 269 29 0 chr17 85320704 85320875 -117605 + G-rich Low_complexity Low_complexity 5 180 0 316 202 71 24 chr17 85321071 85321155 -117325 - MLT1A2 LTR MaLR -286 88 1 918 238 111 29 chr17 85321162 85321334 -117146 - L1MEc LINE L1 -3620 2595 2439 2022 126 7 3 chr17 85321334 85321643 -116837 - AluSq SINE Alu -3 310 1 918 238 111 29 chr17 85321643 85321997 -116483 - L1MEc LINE L1 -3776 2439 2053 2146 116 3 0 chr17 85322578 85322879 -115601 + AluSx SINE Alu 1 302 -10 2244 105 0 6 chr17 85322969 85323282 -115198 + AluSx SINE Alu 1 311 -1 250 225 14 14 chr17 85323321 85323392 -115088 - LTR37B LTR ERV1 -181 287 217 469 167 0 101 chr17 85323960 85324158 -114322 + C-rich Low_complexity Low_complexity 1 178 0 221 137 0 87 chr17 85324188 85324349 -114131 + (CCCCCT)n Simple_repeat Simple_repeat 4 150 0 216 0 0 0 chr17 85324880 85324904 -113576 + (A)n Simple_repeat Simple_repeat 1 24 0 959 158 68 135 chr17 85324921 85325232 -113248 - AluJb SINE Alu -12 290 1 2178 122 0 0 chr17 85325240 85325535 -112945 - AluSq SINE Alu -18 295 1 2808 179 177 28 chr17 85326944 85327904 -110576 - MER52A LTR ERV1 -4 1274 1 1929 141 0 27 chr17 85328049 85328189 -110291 + AluJo SINE Alu 1 143 -169 2389 78 3 0 chr17 85328189 85328497 -109983 + AluSp SINE Alu 3 311 -2 1929 141 0 27 chr17 85328497 85328655 -109825 + AluJo SINE Alu 143 291 -21 1077 159 0 6 chr17 85328757 85328939 -109541 + AluJo SINE Alu 120 300 -12 2229 95 0 10 chr17 85328956 85329250 -109230 + AluY SINE Alu 1 291 -20 305 400 24 18 chr17 85329256 85329421 -109059 - L1MC/D LINE L1 -2213 5595 5430 2284 106 6 0 chr17 85329432 85329743 -108737 - AluSp SINE Alu 0 313 1 1906 159 0 3 chr17 85329750 85330046 -108434 - AluJb SINE Alu -7 305 11 31 0 0 0 chr17 85330051 85330082 -108398 + AT_rich Low_complexity Low_complexity 1 31 0 513 275 0 0 chr17 85330403 85330570 -107910 + (CA)n Simple_repeat Simple_repeat 1 167 0 2050 90 0 0 chr17 85331665 85331932 -106548 + AluSq SINE Alu 34 300 -13 2262 91 3 3 chr17 85331933 85332263 -106217 + AluSp SINE Alu 1 313 0 2343 93 0 0 chr17 85332265 85332576 -105904 + AluY SINE Alu 1 311 0 2105 109 0 0 chr17 85332679 85332989 -105491 + AluSq SINE Alu 1 310 0 1329 85 16 11 chr17 85333218 85333407 -105073 - AluSq SINE Alu -123 190 1 2741 240 49 30 chr17 85333411 85333813 -104667 + L1ME1 LINE L1 5176 5569 -597 2430 60 0 3 chr17 85333813 85334114 -104366 - AluY SINE Alu -11 300 1 2741 240 49 30 chr17 85334114 85334428 -104052 + L1ME1 LINE L1 5569 5919 -247 8237 48 3 0 chr17 85334428 85335394 -103086 + LTR5 LTR ERVK 1 969 0 2741 240 49 30 chr17 85335394 85335647 -102833 + L1ME1 LINE L1 5919 6166 0 453 285 104 30 chr17 85336076 85336292 -102188 + MIR SINE MIR 1 225 -37 315 193 25 12 chr17 85337300 85337394 -101086 + L1M4 LINE L1 5749 5845 -333 1188 130 0 0 chr17 85337496 85337665 -100815 + AluSg/x SINE Alu 136 304 -6 1382 188 73 6 chr17 85338444 85338774 -99706 + MLT1A1 LTR MaLR 11 362 -3 404 269 54 30 chr17 85339251 85339418 -99062 - MLT1K LTR MaLR -17 571 401 2419 60 3 25 chr17 85339619 85339937 -98543 - AluY SINE Alu 0 311 1 2162 75 7 7 chr17 85339937 85340229 -98251 - AluSq SINE Alu -19 294 1 834 243 213 13 chr17 85340262 85340806 -97674 + HAL1 LINE L1 1040 1692 -815 399 258 178 0 chr17 85340808 85341021 -97459 + HAL1 LINE L1 1760 2010 -497 548 95 61 7 chr17 85341985 85342132 -96348 + (CA)n Simple_repeat Simple_repeat 2 156 0 358 139 40 10 chr17 85342239 85342340 -96140 + (CA)n Simple_repeat Simple_repeat 2 105 0 2269 68 0 14 chr17 85342456 85342752 -95728 - AluSg SINE Alu -18 292 1 291 333 12 6 chr17 85343524 85343686 -94794 + G-rich Low_complexity Low_complexity 4 166 0 275 210 16 0 chr17 85344020 85344082 -94398 + Ricksha DNA DNA 360 422 -1624 301 200 0 0 chr17 85344084 85344154 -94326 + MLT2B3 LTR ERVL 346 415 -139 410 221 63 11 chr17 85344539 85344634 -93846 + MIR SINE MIR 113 212 -50 2391 72 0 0 chr17 85344722 85345028 -93452 + AluSc SINE Alu 1 306 -3 3679 145 70 31 chr17 85345750 85346594 -91886 + MER4D LTR ERV1 1 610 0 2633 158 89 80 chr17 85346751 85347344 -91136 + LTR8A LTR ERV1 3 604 -123 1856 90 62 31 chr17 85347344 85347633 -90847 + AluY SINE Alu 1 298 -13 2633 158 89 80 chr17 85347633 85347749 -90731 + LTR8A LTR ERV1 604 718 -9 2182 93 13 16 chr17 85347749 85348061 -90419 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr17 85349022 85349057 -89423 + GC_rich Low_complexity Low_complexity 1 35 0 406 287 93 54 chr17 85349810 85349894 -88586 - L1M1 LINE L1 -743 5403 5324 2206 108 0 13 chr17 85349894 85350210 -88270 + AluSx SINE Alu 1 312 0 406 287 93 54 chr17 85350210 85350473 -88007 - L1M1 LINE L1 -822 5324 5081 2179 87 17 3 chr17 85351499 85351797 -86683 - AluSx SINE Alu -10 302 1 181 319 0 0 chr17 85352053 85352100 -86380 - MIR SINE MIR -85 123 77 2201 105 3 3 chr17 85353208 85353513 -84967 - AluSg1 SINE Alu -4 305 1 219 318 16 95 chr17 85354425 85354551 -83929 + L3 LINE CR1 868 983 -594 666 279 33 60 chr17 85355697 85355792 -82688 + MIR SINE MIR 33 129 -133 2243 103 0 0 chr17 85355792 85356093 -82387 - AluSg SINE Alu -9 301 1 666 279 33 60 chr17 85356093 85356212 -82268 + MIR SINE MIR 129 241 -21 2731 221 88 33 chr17 85356420 85356774 -81706 - MER21A LTR ERV1 0 931 598 1717 178 67 3 chr17 85356774 85357088 -81392 - MER1B DNA MER1_type 0 337 4 2731 221 88 33 chr17 85357088 85357344 -81136 - MER21A LTR ERV1 -333 598 358 2080 78 0 11 chr17 85357344 85357626 -80854 - AluY SINE Alu -32 279 1 2731 221 88 33 chr17 85357626 85357896 -80584 - MER21A LTR ERV1 -573 358 1 2206 95 0 3 chr17 85357979 85358275 -80205 + AluSx SINE Alu 7 301 -11 2102 108 0 0 chr17 85358613 85358899 -79581 + AluSc SINE Alu 18 303 -6 237 216 80 37 chr17 85359250 85359412 -79068 + (CAGCC)n Simple_repeat Simple_repeat 1 169 0 309 323 81 0 chr17 85359789 85359913 -78567 + L1ME4a LINE L1 5475 5608 -513 369 383 74 18 chr17 85359927 85360144 -78336 + L1ME4a LINE L1 5687 5915 -206 2306 77 0 0 chr17 85360183 85360469 -78011 + AluSc SINE Alu 1 286 -23 462 229 64 0 chr17 85360724 85360833 -77647 + MER5A DNA MER1_type 4 119 -70 259 259 0 0 chr17 85361902 85361960 -76520 + Charlie1 DNA MER1_type 1 58 -2703 * 456 199 75 27 chr17 85361959 85362105 -76375 - MLT1C LTR MaLR -309 158 6 2222 62 21 3 chr17 85362182 85362470 -76010 - AluY SINE Alu -18 293 1 2112 137 0 0 chr17 85362470 85362769 -75711 - AluSx SINE Alu -13 299 1 226 255 78 39 chr17 85362854 85362956 -75524 + L3 LINE CR1 1306 1411 -166 1682 128 84 0 chr17 85363708 85363959 -74521 + AluSx SINE Alu 23 294 -18 430 343 0 6 chr17 85364395 85364570 -73910 + (CA)n Simple_repeat Simple_repeat 1 174 0 300 345 0 0 chr17 85364593 85364706 -73774 + (CA)n Simple_repeat Simple_repeat 2 114 0 195 271 0 0 chr17 85364726 85364796 -73684 + (CA)n Simple_repeat Simple_repeat 1 70 0 25 51 0 0 chr17 85365428 85365467 -73013 + GC_rich Low_complexity Low_complexity 1 39 0 373 239 22 39 chr17 85365663 85365843 -72637 + G-rich Low_complexity Low_complexity 4 180 0 2175 81 32 0 chr17 85367922 85368206 -70274 + AluSp SINE Alu 1 293 -20 868 224 15 10 chr17 85368355 85368560 -69920 - AluJb SINE Alu -5 307 102 2191 123 0 0 chr17 85368600 85368909 -69571 + AluSg SINE Alu 1 309 -1 1418 261 64 34 chr17 85368909 85369518 -68962 - HAL1b LINE L1 -472 876 246 210 71 0 0 chr17 85369518 85369546 -68934 + (TG)n Simple_repeat Simple_repeat 2 29 0 1418 261 64 34 chr17 85369546 85369558 -68922 - HAL1b LINE L1 -1102 246 236 2230 81 3 3 chr17 85370084 85370379 -68101 - AluSq SINE Alu -18 295 1 180 0 0 0 chr17 85371051 85371071 -67409 + (CGGGG)n Simple_repeat Simple_repeat 2 21 0 213 351 0 0 chr17 85371491 85371565 -66915 + (CACG)n Simple_repeat Simple_repeat 2 75 0 2190 55 19 16 chr17 85371602 85371911 -66569 - AluY SINE Alu -1 310 1 684 110 195 0 chr17 85371912 85372030 -66450 - AluSg SINE Alu -169 141 1 688 255 102 71 chr17 85372165 85372459 -66021 - MLT1G LTR MaLR -167 394 86 2065 75 30 0 chr17 85372475 85372740 -65740 - AluSx SINE Alu -16 296 24 631 290 132 15 chr17 85372869 85373210 -65270 - HAL1 LINE L1 -794 1713 1333 1958 135 3 14 chr17 85373598 85373894 -64586 + AluSg SINE Alu 1 293 -17 2096 107 4 0 chr17 85374592 85374873 -63607 - AluSx SINE Alu -30 282 1 421 150 0 0 chr17 85375031 85375091 -63389 - AluJ/FLAM SINE Alu -252 60 1 1259 222 60 38 chr17 85376147 85376469 -62011 - MLT1C LTR MaLR -56 411 98 2251 97 0 23 chr17 85376469 85376779 -61701 + AluSx SINE Alu 1 303 -9 2411 91 0 0 chr17 85376779 85377088 -61392 + AluSg SINE Alu 1 309 -1 1259 222 60 38 chr17 85377088 85377161 -61319 - MLT1C LTR MaLR -368 99 6 243 241 9 18 chr17 85377578 85377690 -60790 + C-rich Low_complexity Low_complexity 6 116 0 551 209 99 17 chr17 85377693 85377741 -60739 - L1ME1 LINE L1 -4 6162 6119 2272 107 3 0 chr17 85377741 85378049 -60431 - AluSq SINE Alu -4 309 1 551 209 99 17 chr17 85378049 85378172 -60308 - L1ME1 LINE L1 -47 6119 5977 4034 224 77 55 chr17 85378198 85378642 -59838 - L1ME1 LINE L1 -268 5898 5465 2393 80 0 0 chr17 85378642 85378942 -59538 - AluSx SINE Alu -12 300 1 4034 224 77 55 chr17 85378942 85379047 -59433 - L1ME1 LINE L1 -701 5465 5364 1547 162 9 61 chr17 85379047 85379375 -59105 - AluJo SINE Alu -1 311 1 4034 224 77 55 chr17 85379375 85379704 -58776 - L1ME1 LINE L1 -802 5364 5044 2125 106 0 0 chr17 85379704 85380018 -58462 - AluSg SINE Alu 0 314 1 4034 224 77 55 chr17 85380018 85381182 -57298 - L1ME1 LINE L1 -1122 5044 3806 219 230 0 75 chr17 85381474 85381635 -56845 + (CCCCAG)n Simple_repeat Simple_repeat 6 154 0 * 390 195 0 95 chr17 85381539 85381729 -56751 + C-rich Low_complexity Low_complexity 2 173 0 344 299 0 39 chr17 85381900 85382185 -56295 + C-rich Low_complexity Low_complexity 1 273 0 2245 107 0 0 chr17 85384016 85384314 -54166 - AluSx SINE Alu -14 298 1 5407 170 51 69 chr17 85384400 85385872 -52608 - MER52A LTR ERV1 0 1755 9 1170 86 0 12 chr17 85386920 85387082 -51398 - AluSg/x SINE Alu -4 306 147 2298 109 0 0 chr17 85389692 85390004 -48476 - AluSx SINE Alu 0 312 1 209 277 15 31 chr17 85390837 85390902 -47578 + (CGTG)n Simple_repeat Simple_repeat 4 67 0 508 300 0 27 chr17 85390903 85391428 -47052 + (TG)n Simple_repeat Simple_repeat 1 510 0 456 326 0 22 chr17 85391450 85391634 -46846 + (TG)n Simple_repeat Simple_repeat 1 180 0 1137 238 134 0 chr17 85392423 85392789 -45691 - MLT1C LTR MaLR 0 467 53 2318 70 0 0 chr17 85394483 85394789 -43691 - AluSp SINE Alu 0 306 1 2072 124 7 0 chr17 85395275 85395574 -42906 + AluSg SINE Alu 1 301 -9 630 261 5 32 chr17 85396212 85396400 -42080 + MLT1C LTR MaLR 285 467 0 2024 138 0 3 chr17 85396670 85396967 -41513 + AluSx SINE Alu 1 296 -16 706 268 146 15 chr17 85397289 85397632 -40848 - MER90 LTR ERV1 -146 468 81 1603 156 14 21 chr17 85397932 85398220 -40260 - AluJo SINE Alu -11 301 16 670 237 92 8 chr17 85398480 85398725 -39755 - MLT1D LTR MaLR -7 498 207 1534 0 0 0 chr17 85398890 85399058 -39422 + AluYa5 SINE Alu 130 297 -14 2247 111 0 3 chr17 85399069 85399376 -39104 + AluSx SINE Alu 1 306 -6 1016 162 0 0 chr17 85399381 85399535 -38945 + FAM SINE Alu 21 174 -11 1689 163 3 3 chr17 85401634 85401935 -36545 - AluJb SINE Alu -11 301 1 869 115 8 0 chr17 85402057 85402179 -36301 - FLAM_C SINE Alu -6 127 5 1932 171 0 0 chr17 85402347 85402657 -35823 + AluJb SINE Alu 1 310 -2 245 143 0 0 chr17 85403878 85403913 -34567 - Alu SINE Alu -20 279 245 22 35 0 0 chr17 85403923 85403952 -34528 + AT_rich Low_complexity Low_complexity 1 29 0 2333 75 0 0 chr17 85404907 85405200 -33280 + AluY SINE Alu 1 293 -18 2013 101 28 0 chr17 85405265 85405552 -32928 + AluY SINE Alu 1 295 -16 493 283 112 65 chr17 85405682 85406021 -32459 - L1ME LINE L1 -441 5725 5371 368 278 106 61 chr17 85406131 85406228 -32252 - L1ME LINE L1 -1372 4774 4683 2089 92 0 7 chr17 85406228 85406509 -31971 + AluY SINE Alu 17 295 -16 368 278 106 61 chr17 85406509 85406656 -31824 - L1ME LINE L1 -1463 4683 4519 1730 110 0 0 chr17 85407553 85407790 -30690 + AluSg/x SINE Alu 70 306 -4 25 0 0 0 chr17 85408027 85408052 -30428 + AT_rich Low_complexity Low_complexity 1 25 0 1998 109 3 0 chr17 85408376 85408683 -29797 - AluSx SINE Alu 0 308 1 1277 108 40 22 chr17 85410068 85410291 -28189 - AluJo SINE Alu -1 311 85 2309 88 0 3 chr17 85410650 85410956 -27524 + AluSx SINE Alu 1 305 -7 2310 65 3 0 chr17 85411763 85412055 -26425 + AluSx SINE Alu 1 293 -19 21 36 0 0 chr17 85415749 85415777 -22703 + AT_rich Low_complexity Low_complexity 1 28 0 517 112 255 0 chr17 85415872 85415970 -22510 - FLAM_C SINE Alu -19 124 2 759 206 69 0 chr17 85416173 85416348 -22132 - L1ME LINE L1 -2201 3945 3759 1989 101 14 0 chr17 85416349 85416627 -21853 + AluSx SINE Alu 2 283 -29 2217 71 0 10 chr17 85417068 85417363 -21117 + AluSx SINE Alu 1 292 -20 2048 89 43 36 chr17 85418355 85418658 -19822 - AluSc SINE Alu -4 305 1 1500 175 87 0 chr17 85419120 85419406 -19074 - AluJb SINE Alu -1 311 1 319 246 27 29 chr17 85420013 85420325 -18155 + G-rich Low_complexity Low_complexity 1 311 0 2110 111 10 0 chr17 85420376 85420673 -17807 + AluSp SINE Alu 1 300 -13 460 237 65 36 chr17 85422294 85422433 -16047 - MER5A DNA MER1_type -1 188 46 581 266 132 36 chr17 85422479 85422511 -15969 - Charlie2 DNA MER1_type -31 2831 2803 1876 126 3 26 chr17 85422511 85422813 -15667 + AluSg SINE Alu 2 296 -14 581 266 132 36 chr17 85422813 85423167 -15313 - Charlie2 DNA MER1_type -59 2803 2408 2169 105 0 0 chr17 85423503 85423799 -14681 + AluSx SINE Alu 1 296 -16 732 189 8 0 chr17 85424062 85424194 -14286 - FLAM_C SINE Alu 0 133 1 443 157 66 13 chr17 85424198 85424350 -14130 - L1M4 LINE L1 -753 5393 5237 561 230 0 29 chr17 85424350 85424489 -13991 - Tigger1 DNA MER2_type -1 2417 2283 1845 148 0 3 chr17 85425655 85425945 -12535 - AluJb SINE Alu -23 289 1 830 142 8 8 chr17 85426764 85426898 -11582 - AluJb SINE Alu -178 134 1 416 305 110 0 chr17 85427879 85428043 -10437 - L1M4 LINE L1 -1390 4756 4575 2331 92 3 0 chr17 85428940 85429245 -9235 - AluSq SINE Alu -7 306 1 743 207 183 37 chr17 85429281 85429527 -8953 - L1MA5A LINE L1 -4 6293 6012 735 165 55 0 chr17 85429556 85429683 -8797 - AluJo SINE Alu -177 135 2 370 244 11 0 chr17 85429762 85429852 -8628 - MSTD LTR MaLR -9 387 297 449 328 51 11 chr17 85429902 85430079 -8401 - MSTD LTR MaLR -212 184 1 2062 106 10 26 chr17 85430390 85430701 -7779 - AluSq SINE Alu -7 306 1 1445 227 65 13 chr17 85431544 85431931 -6549 - MLT2D LTR ERVL -7 407 1 26 0 0 0 chr17 85435873 85435899 -2581 + AT_rich Low_complexity Low_complexity 1 26 0 2310 67 3 7 chr17 85436256 85436553 -1927 + AluY SINE Alu 1 296 -15 465 324 69 57 chr17 85437702 85438106 -374 + L1MDb LINE L1 783 1191 -5218 2020 81 15 0 chr17 85438200 85438473 -7 + AluSg SINE Alu 5 281 -29